Query 011116
Match_columns 493
No_of_seqs 150 out of 2185
Neff 10.4
Searched_HMMs 46136
Date Fri Mar 29 08:18:00 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/011116.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/011116hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 KOG1176 Acyl-CoA synthetase [L 100.0 6.9E-78 1.5E-82 592.3 44.0 462 11-490 52-535 (537)
2 COG0365 Acs Acyl-coenzyme A sy 100.0 1.7E-74 3.7E-79 565.1 43.8 455 12-487 48-522 (528)
3 KOG1177 Long chain fatty acid 100.0 9.8E-73 2.1E-77 518.1 37.7 461 16-487 87-587 (596)
4 COG0318 CaiC Acyl-CoA syntheta 100.0 1.2E-70 2.5E-75 560.4 45.3 466 11-489 45-529 (534)
5 PLN02574 4-coumarate--CoA liga 100.0 2.6E-68 5.6E-73 549.4 48.4 468 18-493 78-560 (560)
6 PLN02654 acetate-CoA ligase 100.0 5.4E-68 1.2E-72 554.8 48.1 457 18-488 132-641 (666)
7 PTZ00237 acetyl-CoA synthetase 100.0 8.3E-68 1.8E-72 551.6 45.7 460 18-489 104-625 (647)
8 TIGR02316 propion_prpE propion 100.0 3.4E-67 7.3E-72 547.4 46.9 460 18-490 95-607 (628)
9 TIGR02188 Ac_CoA_lig_AcsA acet 100.0 1.3E-66 2.8E-71 543.8 48.4 458 18-488 100-603 (625)
10 PRK07788 acyl-CoA synthetase; 100.0 5.7E-67 1.2E-71 539.0 44.3 444 19-484 87-548 (549)
11 PRK00174 acetyl-CoA synthetase 100.0 7.3E-66 1.6E-70 538.9 49.8 458 18-488 110-611 (637)
12 PLN02860 o-succinylbenzoate-Co 100.0 8.1E-66 1.8E-70 531.2 48.0 455 18-487 44-554 (563)
13 PLN02246 4-coumarate--CoA liga 100.0 1.7E-65 3.8E-70 526.5 48.0 461 18-487 62-536 (537)
14 PRK04319 acetyl-CoA synthetase 100.0 1.6E-65 3.5E-70 530.0 46.6 452 19-487 86-559 (570)
15 PRK13295 cyclohexanecarboxylat 100.0 6.5E-65 1.4E-69 523.2 50.0 458 19-489 68-546 (547)
16 PRK07529 AMP-binding domain pr 100.0 5.8E-65 1.2E-69 530.2 49.5 454 19-488 71-571 (632)
17 PRK06334 long chain fatty acid 100.0 2.1E-65 4.5E-70 524.4 44.0 450 19-487 58-535 (539)
18 TIGR01217 ac_ac_CoA_syn acetoa 100.0 1E-64 2.2E-69 529.3 47.8 456 18-489 126-628 (652)
19 PLN02330 4-coumarate--CoA liga 100.0 2.2E-64 4.7E-69 519.2 48.3 465 18-490 67-544 (546)
20 COG1021 EntE Peptide arylation 100.0 1.2E-66 2.6E-71 467.5 26.8 457 19-488 66-539 (542)
21 PRK06839 acyl-CoA synthetase; 100.0 1.3E-64 2.9E-69 515.9 45.3 453 13-487 36-495 (496)
22 PRK03584 acetoacetyl-CoA synth 100.0 3.1E-64 6.8E-69 527.9 48.7 458 18-491 126-629 (655)
23 PRK05677 long-chain-fatty-acid 100.0 3.6E-64 7.8E-69 519.1 48.4 458 18-488 61-558 (562)
24 PLN02736 long-chain acyl-CoA s 100.0 1.4E-65 3.1E-70 537.0 37.9 451 18-487 90-641 (651)
25 PRK10524 prpE propionyl-CoA sy 100.0 2.5E-64 5.4E-69 527.0 46.4 459 18-489 96-607 (629)
26 PRK08314 long-chain-fatty-acid 100.0 1.1E-63 2.4E-68 514.8 48.0 454 18-488 47-543 (546)
27 PLN03052 acetate--CoA ligase; 100.0 1.5E-63 3.3E-68 522.4 48.9 458 19-488 221-722 (728)
28 PRK07638 acyl-CoA synthetase; 100.0 1.3E-63 2.9E-68 506.8 45.8 445 19-490 39-484 (487)
29 PRK06060 acyl-CoA synthetase; 100.0 5.2E-64 1.1E-68 530.2 43.7 446 14-486 40-491 (705)
30 PRK13382 acyl-CoA synthetase; 100.0 1E-63 2.2E-68 512.7 44.0 446 14-483 78-536 (537)
31 PRK07514 malonyl-CoA synthase; 100.0 2.6E-63 5.6E-68 507.3 46.2 452 18-487 40-501 (504)
32 PRK07656 long-chain-fatty-acid 100.0 3E-63 6.4E-68 508.2 45.4 451 18-483 42-512 (513)
33 PRK06145 acyl-CoA synthetase; 100.0 4.3E-63 9.4E-68 504.6 46.1 454 18-486 39-496 (497)
34 TIGR03208 cyc_hxne_CoA_lg cycl 100.0 8.8E-63 1.9E-67 506.6 48.1 452 18-482 65-537 (538)
35 PRK09274 peptide synthase; Pro 100.0 1.5E-63 3.3E-68 514.1 42.0 451 19-489 54-550 (552)
36 PRK05605 long-chain-fatty-acid 100.0 6.9E-63 1.5E-67 511.2 47.0 460 19-488 70-570 (573)
37 KOG1175 Acyl-CoA synthetase [L 100.0 1.5E-63 3.3E-68 488.3 39.0 461 17-490 107-605 (626)
38 PRK06155 crotonobetaine/carnit 100.0 1.6E-62 3.5E-67 504.0 46.7 452 18-489 58-526 (542)
39 PRK05852 acyl-CoA synthetase; 100.0 1.3E-62 2.8E-67 504.9 46.0 458 17-487 54-532 (534)
40 PRK08315 AMP-binding domain pr 100.0 2.1E-62 4.6E-67 506.7 47.9 461 18-487 55-551 (559)
41 PRK06187 long-chain-fatty-acid 100.0 1.1E-62 2.4E-67 505.0 45.3 456 18-489 43-521 (521)
42 PRK09088 acyl-CoA synthetase; 100.0 3.4E-62 7.3E-67 496.8 47.9 449 18-488 34-486 (488)
43 PRK08316 acyl-CoA synthetase; 100.0 1.5E-62 3.2E-67 504.3 45.6 456 18-488 48-520 (523)
44 PRK07470 acyl-CoA synthetase; 100.0 2E-62 4.4E-67 503.1 46.1 462 18-493 44-524 (528)
45 PRK03640 O-succinylbenzoic aci 100.0 2.4E-62 5.1E-67 497.5 45.9 444 18-487 39-482 (483)
46 PRK07867 acyl-CoA synthetase; 100.0 3.5E-62 7.6E-67 499.7 47.1 449 18-487 40-507 (529)
47 PLN02614 long-chain acyl-CoA s 100.0 1.6E-63 3.5E-68 520.1 37.8 455 19-487 92-649 (666)
48 PRK07786 long-chain-fatty-acid 100.0 3.1E-62 6.8E-67 502.7 46.3 457 19-490 55-527 (542)
49 PRK06087 short chain acyl-CoA 100.0 4.8E-62 1E-66 502.3 47.2 455 18-488 61-537 (547)
50 PRK07445 O-succinylbenzoic aci 100.0 3.1E-62 6.7E-67 489.1 43.0 417 18-488 31-448 (452)
51 PRK12583 acyl-CoA synthetase; 100.0 9E-62 2E-66 502.1 47.9 461 18-488 57-553 (558)
52 PRK13388 acyl-CoA synthetase; 100.0 7.8E-62 1.7E-66 498.8 45.6 451 19-491 39-510 (540)
53 TIGR02275 DHB_AMP_lig 2,3-dihy 100.0 1.1E-61 2.4E-66 497.2 46.5 448 18-482 60-527 (527)
54 PRK08043 bifunctional acyl-[ac 100.0 4.8E-62 1E-66 515.5 44.1 453 14-491 241-717 (718)
55 PRK05857 acyl-CoA synthetase; 100.0 7.5E-62 1.6E-66 499.2 44.0 462 18-489 53-533 (540)
56 PLN03051 acyl-activating enzym 100.0 9.4E-62 2E-66 493.3 43.9 441 39-490 1-494 (499)
57 PLN03102 acyl-activating enzym 100.0 7.3E-62 1.6E-66 502.5 43.6 460 12-487 47-554 (579)
58 PRK07008 long-chain-fatty-acid 100.0 1.3E-61 2.7E-66 497.7 45.0 456 18-492 51-538 (539)
59 PRK06188 acyl-CoA synthetase; 100.0 2.1E-61 4.5E-66 495.2 46.5 460 18-491 49-521 (524)
60 TIGR03098 ligase_PEP_1 acyl-Co 100.0 2.1E-61 4.4E-66 494.7 46.1 449 18-483 37-514 (515)
61 PRK06710 long-chain-fatty-acid 100.0 2E-61 4.4E-66 499.2 46.1 460 18-491 61-559 (563)
62 PRK07769 long-chain-fatty-acid 100.0 1.3E-62 2.9E-67 513.7 36.1 453 18-490 67-617 (631)
63 PRK05620 long-chain-fatty-acid 100.0 2.1E-61 4.6E-66 499.9 44.6 459 18-491 50-561 (576)
64 PRK10946 entE enterobactin syn 100.0 6.8E-61 1.5E-65 491.9 46.5 453 18-488 60-533 (536)
65 PLN02861 long-chain-fatty-acid 100.0 4.7E-62 1E-66 509.5 38.4 454 19-487 90-646 (660)
66 PRK06164 acyl-CoA synthetase; 100.0 9.6E-61 2.1E-65 492.1 47.2 458 18-488 47-533 (540)
67 PRK08008 caiC putative crotono 100.0 5E-61 1.1E-65 491.8 44.7 449 18-482 49-517 (517)
68 PRK12492 long-chain-fatty-acid 100.0 1.3E-60 2.8E-65 492.7 47.5 459 18-485 61-562 (562)
69 TIGR01734 D-ala-DACP-lig D-ala 100.0 9.7E-61 2.1E-65 488.1 46.0 451 18-486 37-501 (502)
70 PRK12467 peptide synthase; Pro 100.0 7.1E-62 1.5E-66 583.8 43.1 451 14-487 3130-3594(3956)
71 PRK07787 acyl-CoA synthetase; 100.0 1.8E-60 3.9E-65 481.4 45.7 429 19-484 38-470 (471)
72 PTZ00342 acyl-CoA synthetase; 100.0 4.6E-61 9.9E-66 500.4 40.9 454 19-486 104-733 (746)
73 PRK06018 putative acyl-CoA syn 100.0 4.1E-60 9E-65 487.0 47.2 454 18-490 51-537 (542)
74 PRK07059 Long-chain-fatty-acid 100.0 3.3E-60 7.2E-65 489.5 46.6 458 18-484 60-555 (557)
75 PRK08633 2-acyl-glycerophospho 100.0 6.7E-61 1.5E-65 535.1 44.4 456 18-487 653-1143(1146)
76 TIGR03443 alpha_am_amid L-amin 100.0 5.2E-61 1.1E-65 542.9 44.0 452 19-483 283-824 (1389)
77 PRK10252 entF enterobactin syn 100.0 1.3E-60 2.7E-65 538.1 45.4 445 19-484 496-964 (1296)
78 PRK13383 acyl-CoA synthetase; 100.0 3E-60 6.4E-65 485.3 44.0 438 19-482 73-515 (516)
79 PRK12406 long-chain-fatty-acid 100.0 1.5E-59 3.2E-64 479.8 47.8 458 13-492 20-508 (509)
80 PRK06178 acyl-CoA synthetase; 100.0 8.4E-60 1.8E-64 487.6 45.9 458 18-487 70-565 (567)
81 PRK12316 peptide synthase; Pro 100.0 7.4E-61 1.6E-65 583.5 44.1 449 13-485 545-1004(5163)
82 PRK12476 putative fatty-acid-- 100.0 3.8E-61 8.1E-66 500.8 35.6 453 18-491 80-610 (612)
83 PRK08751 putative long-chain f 100.0 9.5E-60 2.1E-64 486.7 45.5 457 18-485 62-558 (560)
84 PRK12316 peptide synthase; Pro 100.0 1.2E-60 2.6E-65 581.7 45.3 448 19-485 2041-2502(5163)
85 PRK05851 long-chain-fatty-acid 100.0 1E-60 2.2E-65 489.1 36.5 444 19-488 44-523 (525)
86 TIGR02262 benz_CoA_lig benzoat 100.0 2.8E-59 6.1E-64 477.6 46.6 449 18-484 42-508 (508)
87 PRK12467 peptide synthase; Pro 100.0 1.7E-60 3.6E-65 572.1 43.1 453 13-485 1608-2083(3956)
88 PRK08279 long-chain-acyl-CoA s 100.0 1.2E-59 2.6E-64 489.3 43.9 455 18-489 74-566 (600)
89 PRK13390 acyl-CoA synthetase; 100.0 5.8E-60 1.2E-64 481.8 40.3 443 19-482 37-501 (501)
90 PRK04813 D-alanine--poly(phosp 100.0 5E-59 1.1E-63 475.8 47.3 452 18-487 39-503 (503)
91 PRK08276 long-chain-fatty-acid 100.0 1.5E-59 3.4E-64 479.0 41.6 456 18-489 23-498 (502)
92 PLN02387 long-chain-fatty-acid 100.0 5.9E-60 1.3E-64 495.6 39.4 452 19-487 119-689 (696)
93 PLN02479 acetate-CoA ligase 100.0 5.4E-59 1.2E-63 480.8 44.3 456 19-491 58-562 (567)
94 TIGR03205 pimA dicarboxylate-- 100.0 1.1E-58 2.4E-63 476.6 46.1 454 18-482 58-541 (541)
95 PRK08974 long-chain-fatty-acid 100.0 4.6E-58 1E-62 473.9 48.8 457 18-487 60-555 (560)
96 TIGR01923 menE O-succinylbenzo 100.0 1.6E-58 3.4E-63 463.4 42.0 430 12-481 7-436 (436)
97 PRK13391 acyl-CoA synthetase; 100.0 5.6E-58 1.2E-62 468.2 46.4 451 17-488 35-510 (511)
98 PRK08180 feruloyl-CoA synthase 100.0 3.4E-59 7.3E-64 486.0 37.7 448 18-487 81-596 (614)
99 PRK05691 peptide synthase; Val 100.0 6.5E-59 1.4E-63 563.0 45.1 448 14-484 1166-1625(4334)
100 PTZ00216 acyl-CoA synthetase; 100.0 5.2E-59 1.1E-63 489.8 37.7 460 14-487 131-691 (700)
101 PLN02430 long-chain-fatty-acid 100.0 1.5E-58 3.2E-63 482.3 40.0 456 18-487 88-646 (660)
102 PRK07798 acyl-CoA synthetase; 100.0 1.5E-57 3.2E-62 468.4 46.0 456 19-487 41-532 (533)
103 PRK05691 peptide synthase; Val 100.0 1.2E-58 2.7E-63 560.7 43.6 449 13-484 3754-4225(4334)
104 PRK06814 acylglycerophosphoeth 100.0 8.8E-58 1.9E-62 508.1 46.8 447 18-488 670-1133(1140)
105 PRK08162 acyl-CoA synthetase; 100.0 2.1E-57 4.6E-62 467.8 46.0 454 18-487 55-539 (545)
106 COG1022 FAA1 Long-chain acyl-C 100.0 1.4E-58 3.1E-63 458.9 34.9 440 19-487 58-601 (613)
107 PRK09029 O-succinylbenzoic aci 100.0 4.5E-57 9.7E-62 455.2 44.4 416 18-489 40-455 (458)
108 KOG1256 Long-chain acyl-CoA sy 100.0 7.6E-58 1.7E-62 446.6 34.9 457 19-488 121-681 (691)
109 PRK07868 acyl-CoA synthetase; 100.0 3.8E-57 8.3E-62 489.1 43.6 445 14-486 482-957 (994)
110 PRK09192 acyl-CoA synthetase; 100.0 1.5E-57 3.2E-62 471.3 38.1 455 18-491 61-570 (579)
111 PRK05850 acyl-CoA synthetase; 100.0 6.2E-57 1.4E-61 467.3 37.0 457 18-493 47-574 (578)
112 PRK12582 acyl-CoA synthetase; 100.0 1.4E-56 3E-61 467.2 36.2 449 18-487 92-607 (624)
113 PRK08308 acyl-CoA synthetase; 100.0 8.6E-55 1.9E-59 432.5 44.7 390 13-481 17-407 (414)
114 PRK07768 long-chain-fatty-acid 100.0 1.9E-54 4.2E-59 445.6 40.4 450 13-486 38-544 (545)
115 KOG1180 Acyl-CoA synthetase [L 100.0 2E-53 4.3E-58 397.4 27.0 457 11-487 96-669 (678)
116 TIGR01733 AA-adenyl-dom amino 100.0 9.1E-52 2E-56 410.9 36.7 383 18-416 11-408 (408)
117 KOG1179 Very long-chain acyl-C 100.0 6.2E-51 1.3E-55 382.4 34.6 462 13-487 113-613 (649)
118 PF00501 AMP-binding: AMP-bind 100.0 3.5E-51 7.6E-56 407.8 25.4 361 18-392 33-417 (417)
119 PRK07824 O-succinylbenzoic aci 100.0 1.7E-48 3.7E-53 379.8 37.4 321 128-487 32-357 (358)
120 PTZ00297 pantothenate kinase; 100.0 8.5E-40 1.8E-44 354.1 34.6 419 18-487 469-995 (1452)
121 TIGR02372 4_coum_CoA_lig 4-cou 100.0 7.7E-40 1.7E-44 317.1 29.5 291 129-477 93-386 (386)
122 TIGR02155 PA_CoA_ligase phenyl 100.0 2.3E-38 5E-43 314.7 30.0 326 128-479 72-418 (422)
123 COG1020 EntF Non-ribosomal pep 100.0 1.4E-36 3E-41 318.9 34.6 372 19-409 265-642 (642)
124 TIGR03335 F390_ftsA coenzyme F 100.0 6.2E-32 1.3E-36 268.6 29.9 329 127-478 82-440 (445)
125 COG1541 PaaK Coenzyme F390 syn 100.0 5.3E-30 1.1E-34 241.5 29.0 330 124-478 83-430 (438)
126 KOG1178 Non-ribosomal peptide 100.0 1.6E-30 3.6E-35 268.2 23.9 452 19-487 82-579 (1032)
127 KOG3628 Predicted AMP-binding 100.0 3.6E-28 7.8E-33 243.4 30.2 462 14-492 811-1356(1363)
128 PRK09188 serine/threonine prot 99.9 2.6E-21 5.6E-26 183.6 15.3 118 361-487 207-328 (365)
129 TIGR02304 aden_form_hyp probab 99.8 6.3E-19 1.4E-23 171.4 24.3 247 133-419 101-366 (430)
130 TIGR03089 conserved hypothetic 99.8 9.2E-20 2E-24 163.9 16.9 171 18-228 39-227 (227)
131 KOG3628 Predicted AMP-binding 99.8 1.2E-18 2.5E-23 175.9 17.0 468 11-492 131-709 (1363)
132 PF04443 LuxE: Acyl-protein sy 99.4 9E-12 2E-16 118.8 19.9 231 129-387 87-350 (365)
133 PF13193 AMP-binding_C: AMP-bi 99.4 1.7E-12 3.8E-17 94.1 6.7 70 400-475 1-73 (73)
134 PF03321 GH3: GH3 auxin-respon 98.7 5.6E-08 1.2E-12 98.4 9.7 176 251-453 266-467 (528)
135 PLN02249 indole-3-acetic acid- 98.4 0.00016 3.4E-09 73.8 24.2 131 251-407 301-456 (597)
136 PLN02620 indole-3-acetic acid- 98.2 0.00013 2.7E-09 73.8 19.7 135 251-408 303-470 (612)
137 PLN02247 indole-3-acetic acid- 98.2 0.0002 4.3E-09 72.5 20.8 136 251-408 292-464 (606)
138 PF14535 AMP-binding_C_2: AMP- 97.9 4.6E-05 9.9E-10 58.2 6.3 81 393-478 1-91 (96)
139 COG1541 PaaK Coenzyme F390 syn 85.6 2.2 4.7E-05 41.9 6.4 77 11-92 116-194 (438)
140 COG0399 WecE Predicted pyridox 78.0 8.7 0.00019 37.2 7.4 73 9-87 52-129 (374)
141 COG1167 ARO8 Transcriptional r 73.6 27 0.00058 35.3 9.9 83 29-115 176-276 (459)
142 PF00501 AMP-binding: AMP-bind 71.4 33 0.00072 33.8 10.1 92 128-232 7-99 (417)
143 PF01041 DegT_DnrJ_EryC1: DegT 70.9 7.2 0.00016 37.9 5.1 71 11-87 45-120 (363)
144 PLN02736 long-chain acyl-CoA s 68.7 96 0.0021 32.9 13.4 103 149-260 77-180 (651)
145 TIGR02155 PA_CoA_ligase phenyl 65.5 14 0.00031 36.7 6.1 68 20-90 108-177 (422)
146 cd07050 BMC_EutL_repeat2 ethan 62.5 12 0.00026 26.7 3.3 39 20-59 3-41 (87)
147 PLN02565 cysteine synthase 61.0 38 0.00083 32.3 7.7 61 27-88 60-121 (322)
148 PLN03052 acetate--CoA ligase; 60.8 84 0.0018 33.9 11.2 101 129-235 188-289 (728)
149 PRK11761 cysM cysteine synthas 60.2 39 0.00085 31.7 7.6 58 29-88 60-117 (296)
150 PRK09274 peptide synthase; Pro 60.2 72 0.0016 32.9 10.4 101 129-234 19-121 (552)
151 TIGR03335 F390_ftsA coenzyme F 59.2 40 0.00086 33.9 7.9 64 20-88 119-184 (445)
152 PRK02261 methylaspartate mutas 59.1 97 0.0021 25.2 9.5 94 188-288 14-120 (137)
153 TIGR03089 conserved hypothetic 58.2 26 0.00056 31.4 5.8 54 25-81 171-226 (227)
154 PLN03013 cysteine synthase 57.5 40 0.00086 33.5 7.2 61 28-89 170-230 (429)
155 PTZ00237 acetyl-CoA synthetase 56.0 99 0.0021 32.8 10.7 97 130-234 75-172 (647)
156 PLN02387 long-chain-fatty-acid 56.0 1.1E+02 0.0024 32.9 11.1 104 149-261 105-209 (696)
157 TIGR01138 cysM cysteine syntha 55.9 55 0.0012 30.6 7.8 58 29-88 56-113 (290)
158 TIGR02370 pyl_corrinoid methyl 55.9 1.4E+02 0.003 26.0 10.2 88 181-270 86-183 (197)
159 PLN02556 cysteine synthase/L-3 55.1 43 0.00094 32.6 7.1 59 29-88 107-165 (368)
160 PLN02654 acetate-CoA ligase 54.6 1.1E+02 0.0024 32.6 10.8 99 129-235 102-201 (666)
161 PRK07529 AMP-binding domain pr 54.0 85 0.0018 33.2 9.8 99 129-233 38-136 (632)
162 PRK04319 acetyl-CoA synthetase 53.4 78 0.0017 32.9 9.3 87 149-240 72-159 (570)
163 PRK10717 cysteine synthase A; 53.3 58 0.0013 31.2 7.7 58 29-88 61-118 (330)
164 PLN03102 acyl-activating enzym 53.3 72 0.0016 33.3 9.0 83 150-237 39-122 (579)
165 PRK03584 acetoacetyl-CoA synth 52.9 1.1E+02 0.0025 32.4 10.6 97 129-234 97-194 (655)
166 PRK13295 cyclohexanecarboxylat 52.5 1.1E+02 0.0024 31.5 10.2 98 129-234 37-135 (547)
167 TIGR02379 ECA_wecE TDP-4-keto- 52.3 54 0.0012 32.1 7.4 68 14-87 54-126 (376)
168 PRK08316 acyl-CoA synthetase; 52.3 1.3E+02 0.0028 30.6 10.7 88 149-241 35-123 (523)
169 TIGR02188 Ac_CoA_lig_AcsA acet 52.0 1.2E+02 0.0025 32.0 10.5 99 129-235 70-169 (625)
170 PLN00011 cysteine synthase 51.4 68 0.0015 30.6 7.7 67 19-88 56-123 (323)
171 cd01445 TST_Repeats Thiosulfat 51.2 34 0.00074 27.9 4.9 41 18-60 82-125 (138)
172 COG4821 Uncharacterized protei 51.1 39 0.00085 29.2 5.2 58 7-88 82-139 (243)
173 PRK11706 TDP-4-oxo-6-deoxy-D-g 51.0 56 0.0012 31.9 7.3 68 14-87 54-126 (375)
174 PRK07788 acyl-CoA synthetase; 50.9 91 0.002 32.2 9.3 86 150-240 74-160 (549)
175 PRK00174 acetyl-CoA synthetase 50.5 1.3E+02 0.0028 31.7 10.6 98 129-234 80-178 (637)
176 PRK06155 crotonobetaine/carnit 50.3 1.1E+02 0.0023 31.6 9.7 87 150-241 46-133 (542)
177 PTZ00342 acyl-CoA synthetase; 50.2 1.8E+02 0.0039 31.5 11.5 123 129-261 74-208 (746)
178 PRK06187 long-chain-fatty-acid 50.1 1.5E+02 0.0033 30.0 10.8 85 151-240 32-117 (521)
179 TIGR01139 cysK cysteine syntha 49.9 83 0.0018 29.5 8.0 61 27-89 51-112 (298)
180 PLN02246 4-coumarate--CoA liga 49.5 1.4E+02 0.003 30.7 10.4 99 129-239 36-135 (537)
181 PLN02614 long-chain acyl-CoA s 48.9 2.4E+02 0.0051 30.1 12.1 87 150-241 79-166 (666)
182 PRK05857 acyl-CoA synthetase; 48.6 78 0.0017 32.6 8.3 97 128-236 26-123 (540)
183 KOG1177 Long chain fatty acid 48.6 1.5E+02 0.0033 29.8 9.3 109 148-261 75-198 (596)
184 TIGR01217 ac_ac_CoA_syn acetoa 48.6 1.4E+02 0.0031 31.7 10.4 96 130-234 98-194 (652)
185 TIGR01137 cysta_beta cystathio 47.9 66 0.0014 32.4 7.5 58 29-88 59-116 (454)
186 KOG1176 Acyl-CoA synthetase [L 47.7 2.2E+02 0.0047 29.4 11.0 94 148-244 43-137 (537)
187 PRK07656 long-chain-fatty-acid 47.4 1.8E+02 0.004 29.4 10.9 84 150-238 30-114 (513)
188 COG0031 CysK Cysteine synthase 47.1 91 0.002 29.2 7.4 69 18-88 44-116 (300)
189 TIGR01136 cysKM cysteine synth 46.4 97 0.0021 29.1 7.9 58 29-88 55-112 (299)
190 KOG0025 Zn2+-binding dehydroge 45.8 62 0.0013 30.0 5.9 65 27-92 156-221 (354)
191 PRK08279 long-chain-acyl-CoA s 45.7 2E+02 0.0044 30.0 11.1 98 129-240 50-148 (600)
192 PLN02356 phosphateglycerate ki 45.6 76 0.0016 31.5 7.1 58 29-88 101-158 (423)
193 PRK08008 caiC putative crotono 44.9 2.8E+02 0.006 28.2 11.7 101 129-238 20-121 (517)
194 PF09580 Spore_YhcN_YlaJ: Spor 44.3 92 0.002 26.5 6.8 50 398-453 77-126 (177)
195 cd02070 corrinoid_protein_B12- 44.3 2.2E+02 0.0047 24.9 9.9 86 181-268 85-179 (201)
196 TIGR02316 propion_prpE propion 44.1 99 0.0022 32.6 8.4 98 129-234 65-163 (628)
197 PRK05605 long-chain-fatty-acid 44.1 1.2E+02 0.0027 31.4 9.1 86 150-240 57-143 (573)
198 PRK08315 AMP-binding domain pr 43.7 73 0.0016 32.9 7.3 69 20-89 228-298 (559)
199 PRK07514 malonyl-CoA synthase; 42.9 1.5E+02 0.0033 30.0 9.4 86 149-239 27-113 (504)
200 COG0318 CaiC Acyl-CoA syntheta 42.7 3.2E+02 0.0069 28.2 11.7 95 129-235 24-119 (534)
201 PRK11658 UDP-4-amino-4-deoxy-L 42.6 89 0.0019 30.6 7.3 66 14-85 56-126 (379)
202 PLN02861 long-chain-fatty-acid 42.4 1.8E+02 0.0038 31.0 10.0 88 149-241 76-164 (660)
203 PLN02574 4-coumarate--CoA liga 42.3 2.3E+02 0.0049 29.3 10.7 87 150-240 66-153 (560)
204 cd02069 methionine_synthase_B1 42.3 2.5E+02 0.0053 24.9 9.5 90 179-272 89-187 (213)
205 TIGR03588 PseC UDP-4-keto-6-de 41.8 1.1E+02 0.0024 29.8 7.9 69 14-87 52-128 (380)
206 PLN02430 long-chain-fatty-acid 41.7 4.6E+02 0.01 27.9 13.6 87 150-241 76-163 (660)
207 PRK13383 acyl-CoA synthetase; 41.4 1.4E+02 0.0031 30.4 9.0 86 150-240 60-146 (516)
208 TIGR01733 AA-adenyl-dom amino 41.3 1.3E+02 0.0027 29.4 8.3 65 175-240 21-86 (408)
209 PRK13388 acyl-CoA synthetase; 40.3 2.5E+02 0.0054 28.9 10.5 84 150-238 26-111 (540)
210 PRK13391 acyl-CoA synthetase; 40.2 2.8E+02 0.0061 28.2 10.9 99 129-239 10-109 (511)
211 PLN02330 4-coumarate--CoA liga 40.1 2E+02 0.0043 29.6 9.8 97 129-237 41-138 (546)
212 PRK07798 acyl-CoA synthetase; 40.0 2.9E+02 0.0063 28.1 11.0 87 149-240 27-114 (533)
213 cd01561 CBS_like CBS_like: Thi 39.9 1.4E+02 0.003 27.9 7.8 59 29-89 50-108 (291)
214 PRK08276 long-chain-fatty-acid 39.7 1.9E+02 0.0042 29.2 9.6 86 150-240 11-97 (502)
215 PRK15407 lipopolysaccharide bi 39.4 1.1E+02 0.0024 30.7 7.4 56 28-88 107-167 (438)
216 TIGR03098 ligase_PEP_1 acyl-Co 39.3 1.6E+02 0.0034 30.0 8.9 86 150-240 25-111 (515)
217 PRK05850 acyl-CoA synthetase; 39.0 2.9E+02 0.0063 28.6 10.9 104 129-240 14-123 (578)
218 PRK06839 acyl-CoA synthetase; 38.9 3.8E+02 0.0082 26.9 11.6 88 149-240 26-114 (496)
219 PRK08314 long-chain-fatty-acid 38.7 1.6E+02 0.0035 30.2 8.9 87 150-241 35-123 (546)
220 PLN03051 acyl-activating enzym 38.4 1.1E+02 0.0024 31.1 7.6 67 25-91 153-219 (499)
221 PF11142 DUF2917: Protein of u 38.2 1.2E+02 0.0027 20.7 5.3 44 313-383 15-58 (63)
222 TIGR02898 spore_YhcN_YlaJ spor 37.9 1.9E+02 0.0041 24.2 7.3 62 399-465 57-120 (158)
223 PRK06087 short chain acyl-CoA 37.9 2.1E+02 0.0045 29.4 9.6 79 150-233 49-128 (547)
224 PRK09088 acyl-CoA synthetase; 37.8 2.7E+02 0.0058 28.0 10.3 80 150-234 22-102 (488)
225 PRK13382 acyl-CoA synthetase; 37.6 2.1E+02 0.0046 29.4 9.5 83 150-237 68-151 (537)
226 PRK06334 long chain fatty acid 37.3 1.8E+02 0.004 29.9 9.0 82 151-240 46-128 (539)
227 TIGR03595 Obg_CgtA_exten Obg f 36.5 35 0.00076 23.9 2.4 19 19-38 45-63 (69)
228 TIGR03443 alpha_am_amid L-amin 36.3 2E+02 0.0044 33.8 10.0 100 129-233 249-349 (1389)
229 PRK07638 acyl-CoA synthetase; 36.2 80 0.0017 31.9 6.1 67 25-92 177-243 (487)
230 PRK12583 acyl-CoA synthetase; 35.9 1.4E+02 0.003 30.8 7.9 69 20-89 230-300 (558)
231 PF09269 DUF1967: Domain of un 35.8 37 0.0008 23.8 2.4 19 19-38 45-63 (69)
232 PF00403 HMA: Heavy-metal-asso 35.7 1.3E+02 0.0029 20.0 5.3 46 398-451 13-58 (62)
233 PF03808 Glyco_tran_WecB: Glyc 35.7 73 0.0016 27.1 4.8 77 202-284 3-80 (172)
234 PRK06702 O-acetylhomoserine am 35.5 1.2E+02 0.0026 30.3 6.9 69 14-87 84-154 (432)
235 PRK10524 prpE propionyl-CoA sy 35.3 1.6E+02 0.0034 31.1 8.3 98 129-234 66-164 (629)
236 PLN02479 acetate-CoA ligase 34.2 2.5E+02 0.0055 29.0 9.5 83 150-237 45-128 (567)
237 COG1064 AdhP Zn-dependent alco 34.1 79 0.0017 30.3 5.0 62 21-88 157-218 (339)
238 COG0365 Acs Acyl-coenzyme A sy 33.9 2.3E+02 0.0051 29.1 8.7 99 132-238 25-124 (528)
239 PRK06188 acyl-CoA synthetase; 33.7 1.6E+02 0.0035 30.0 7.9 68 21-90 198-265 (524)
240 PF01037 AsnC_trans_reg: AsnC 33.7 1.6E+02 0.0035 20.3 5.7 51 396-456 10-60 (74)
241 PRK08960 hypothetical protein; 33.5 4E+02 0.0087 25.9 10.3 59 29-89 113-175 (387)
242 cd06448 L-Ser-dehyd Serine deh 33.1 89 0.0019 29.7 5.4 60 28-89 47-106 (316)
243 COG5012 Predicted cobalamin bi 33.0 3.6E+02 0.0077 24.1 8.6 83 188-272 115-205 (227)
244 cd01449 TST_Repeat_2 Thiosulfa 33.0 64 0.0014 25.0 3.8 39 19-59 66-104 (118)
245 TIGR03208 cyc_hxne_CoA_lg cycl 33.0 3.3E+02 0.0072 27.9 10.1 81 149-234 52-133 (538)
246 PRK10696 tRNA 2-thiocytidine b 32.8 2E+02 0.0043 26.4 7.4 67 19-87 16-94 (258)
247 PRK07008 long-chain-fatty-acid 32.6 1.1E+02 0.0024 31.5 6.4 66 25-90 212-277 (539)
248 PLN02860 o-succinylbenzoate-Co 32.1 1.7E+02 0.0037 30.3 7.8 81 150-235 32-113 (563)
249 PRK12582 acyl-CoA synthetase; 32.1 1.7E+02 0.0036 30.9 7.8 81 149-234 79-165 (624)
250 PRK10083 putative oxidoreducta 31.4 1.4E+02 0.0031 28.3 6.7 61 22-86 151-212 (339)
251 PRK07470 acyl-CoA synthetase; 31.4 2.7E+02 0.0059 28.4 9.1 83 150-237 32-115 (528)
252 COG2351 Transthyretin-like pro 31.1 88 0.0019 24.5 3.9 16 308-323 19-34 (124)
253 cd01519 RHOD_HSP67B2 Member of 30.9 1E+02 0.0022 23.3 4.5 39 19-59 54-92 (106)
254 PRK06381 threonine synthase; V 30.8 95 0.0021 29.5 5.2 57 32-89 62-118 (319)
255 PRK12406 long-chain-fatty-acid 30.7 2.6E+02 0.0056 28.4 8.8 86 150-240 11-97 (509)
256 PRK13390 acyl-CoA synthetase; 30.5 3.3E+02 0.0071 27.6 9.5 94 129-234 10-104 (501)
257 PRK06164 acyl-CoA synthetase; 30.3 1E+02 0.0022 31.7 5.7 68 22-90 212-279 (540)
258 PRK08162 acyl-CoA synthetase; 29.9 2.5E+02 0.0054 28.8 8.6 86 150-240 43-129 (545)
259 PRK05852 acyl-CoA synthetase; 29.8 4E+02 0.0086 27.3 10.0 78 150-232 43-121 (534)
260 PRK07786 long-chain-fatty-acid 29.7 3E+02 0.0064 28.3 9.1 83 150-237 42-125 (542)
261 cd02071 MM_CoA_mut_B12_BD meth 29.3 2.8E+02 0.0062 21.8 7.2 83 189-275 11-101 (122)
262 PRK05677 long-chain-fatty-acid 29.2 3E+02 0.0065 28.4 9.1 84 150-237 49-133 (562)
263 PRK11493 sseA 3-mercaptopyruva 29.1 71 0.0015 29.7 3.9 39 19-59 219-257 (281)
264 PRK08751 putative long-chain f 29.0 3E+02 0.0065 28.4 9.0 98 129-239 38-136 (560)
265 PRK12476 putative fatty-acid-- 29.0 6.8E+02 0.015 26.2 11.8 103 129-239 47-155 (612)
266 PRK02261 methylaspartate mutas 29.0 3.2E+02 0.0068 22.2 7.6 42 47-88 21-62 (137)
267 PTZ00216 acyl-CoA synthetase; 28.9 3.2E+02 0.007 29.3 9.4 89 148-241 119-208 (700)
268 TIGR01923 menE O-succinylbenzo 28.7 2.6E+02 0.0057 27.5 8.3 60 175-235 20-80 (436)
269 PRK06178 acyl-CoA synthetase; 28.6 3E+02 0.0065 28.4 9.0 87 150-241 58-145 (567)
270 PRK03640 O-succinylbenzoic aci 28.5 3.3E+02 0.0072 27.2 9.1 82 150-236 27-109 (483)
271 PRK07059 Long-chain-fatty-acid 28.2 3E+02 0.0066 28.3 8.9 84 149-237 47-131 (557)
272 PF00464 SHMT: Serine hydroxym 27.7 2.8E+02 0.006 27.4 7.7 115 29-153 107-245 (399)
273 PF01861 DUF43: Protein of unk 27.3 1.5E+02 0.0032 26.8 5.3 87 5-96 21-107 (243)
274 PRK08633 2-acyl-glycerophospho 27.1 4.6E+02 0.0099 30.0 10.8 100 128-241 627-727 (1146)
275 TIGR03590 PseG pseudaminic aci 26.2 3.1E+02 0.0068 25.4 7.7 66 16-89 20-89 (279)
276 TIGR02262 benz_CoA_lig benzoat 26.1 4.4E+02 0.0096 26.6 9.6 85 150-239 30-115 (508)
277 PRK15481 transcriptional regul 25.7 6.7E+02 0.014 24.9 12.6 54 29-87 162-218 (431)
278 PRK07867 acyl-CoA synthetase; 25.7 3.8E+02 0.0082 27.5 9.0 85 150-238 28-113 (529)
279 KOG1252 Cystathionine beta-syn 25.4 2.9E+02 0.0063 26.4 7.0 63 27-90 98-160 (362)
280 PRK06060 acyl-CoA synthetase; 25.1 3.6E+02 0.0079 28.9 9.0 82 150-236 30-112 (705)
281 PRK06018 putative acyl-CoA syn 24.9 2.9E+02 0.0064 28.3 8.1 84 150-238 39-123 (542)
282 PLN02723 3-mercaptopyruvate su 24.3 91 0.002 29.7 3.8 39 19-59 257-295 (320)
283 COG0604 Qor NADPH:quinone redu 24.3 3E+02 0.0066 26.2 7.3 62 21-86 132-193 (326)
284 PRK04813 D-alanine--poly(phosp 24.0 2.8E+02 0.0061 27.9 7.6 80 150-234 27-107 (503)
285 KOG1180 Acyl-CoA synthetase [L 23.7 8.4E+02 0.018 25.4 10.9 83 174-261 109-193 (678)
286 PRK08246 threonine dehydratase 23.6 3.3E+02 0.0072 25.7 7.4 56 31-88 67-122 (310)
287 cd00640 Trp-synth-beta_II Tryp 23.6 1.8E+02 0.0038 26.3 5.4 57 31-89 49-105 (244)
288 PRK06710 long-chain-fatty-acid 23.2 3.1E+02 0.0068 28.2 7.9 83 150-237 49-132 (563)
289 KOG1250 Threonine/serine dehyd 23.1 2E+02 0.0044 28.0 5.6 48 42-89 122-169 (457)
290 PRK05939 hypothetical protein; 22.8 3.3E+02 0.0071 26.9 7.4 55 29-86 83-137 (397)
291 cd01563 Thr-synth_1 Threonine 22.5 1.6E+02 0.0035 28.0 5.2 55 32-88 70-124 (324)
292 KOG0633 Histidinol phosphate a 22.0 52 0.0011 29.9 1.4 63 25-88 103-168 (375)
293 PRK08180 feruloyl-CoA synthase 21.7 3.8E+02 0.0081 28.2 8.2 97 129-234 52-154 (614)
294 PRK05620 long-chain-fatty-acid 21.6 2.3E+02 0.0049 29.5 6.5 63 27-89 219-281 (576)
295 cd01448 TST_Repeat_1 Thiosulfa 21.6 2.4E+02 0.0052 21.9 5.3 39 19-59 67-106 (122)
296 PRK06382 threonine dehydratase 21.5 3E+02 0.0065 27.3 6.9 47 42-88 81-127 (406)
297 PRK08574 cystathionine gamma-s 21.5 3.1E+02 0.0067 26.9 7.0 56 29-87 89-144 (385)
298 COG1205 Distinct helicase fami 21.4 4.7E+02 0.01 28.9 8.8 83 177-259 113-201 (851)
299 PRK07048 serine/threonine dehy 21.2 3E+02 0.0064 26.2 6.6 48 42-89 80-127 (321)
300 TIGR03205 pimA dicarboxylate-- 21.1 3.9E+02 0.0084 27.4 8.1 80 150-234 46-126 (541)
301 PRK09192 acyl-CoA synthetase; 20.7 5.8E+02 0.012 26.5 9.3 87 149-240 48-142 (579)
302 cd00615 Orn_deC_like Ornithine 20.5 4.1E+02 0.009 24.7 7.4 55 29-87 96-161 (294)
303 PRK09275 aspartate aminotransf 20.5 2.6E+02 0.0056 28.9 6.3 58 29-89 187-251 (527)
304 TIGR01734 D-ala-DACP-lig D-ala 20.4 4E+02 0.0087 26.8 8.0 70 21-90 171-242 (502)
305 KOG0024 Sorbitol dehydrogenase 20.4 2.8E+02 0.0062 26.3 5.9 61 25-89 163-223 (354)
No 1
>KOG1176 consensus Acyl-CoA synthetase [Lipid transport and metabolism]
Probab=100.00 E-value=6.9e-78 Score=592.35 Aligned_cols=462 Identities=39% Similarity=0.616 Sum_probs=408.9
Q ss_pred cccchhhhHHHHHHhhCC--CCCCCEEEEECCCCCCcHHHHHHHHHHcCCeeccCCCCCCHHHHHHHHhhcCCeEEEEcC
Q 011116 11 ANSSARFTLSHALSKRDS--LCRKTTSLTSSPLPPSTSPVLYFSLLSLGVVISPANPLSSTSEVSHQIQLSKPSIAFATS 88 (493)
Q Consensus 11 ~~~~~~~~lA~~L~~~~g--l~~gd~V~l~~~~~~~~~~~~~lA~~~~G~~~v~i~~~~~~~~l~~~l~~~~~~~il~~~ 88 (493)
.+++.|+ |.+| .+.| +++||+|++++| |++++.++++||+..|+++.++||.+...++.++++.+++++++++.
T Consensus 52 ~~~~~r~--A~~L-~~~~~~i~~gDvV~i~~p-Ns~~~~~~~la~~~~Ga~~~~~Np~~~~~ei~~~~~~s~~kiif~d~ 127 (537)
T KOG1176|consen 52 HDRCRRL--ASAL-SELGLGIKKGDVVGILAP-NTPEFVELALAVPMAGAVLNPLNPRLTASEIAKQLKDSKPKLIFVDE 127 (537)
T ss_pred HHHHHHH--HHHH-HhcCCCCCCCCEEEEEcC-CCHHHHHHHHHHHHcCccccccCcccCHHHHHHHHHhcCCeEEEEcC
Confidence 4456666 9999 6554 899999999999 99999999999999999999999999999999999999999999999
Q ss_pred CCcccCCC-----CCcEEEecCc----h----------hhhhhccCcccccccCCCCCCCCCCeEEEEccCCCCCCccce
Q 011116 89 HTSYKLPS-----NLRTILMDSP----E----------FISLLNQNEDVADFANSNMTVYQSDPAAILYSSGTTGKVKGV 149 (493)
Q Consensus 89 ~~~~~~~~-----~~~~~~~~~~----~----------~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~TSGTTG~pK~v 149 (493)
+..+.+.+ ...++.+... . +..+..... +.. ......+|++.++|||||||.||||
T Consensus 128 ~~~~~i~~~~~~~~~~i~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~-~~~~~~dd~~~il~SSGTTg~PKgV 202 (537)
T KOG1176|consen 128 DFYDKISEATSKLALKIIVLTGDEGVISISDLVEDLDAFEDLMPEGL----PDG-IRPVSEDDTAAILYSSGTTGLPKGV 202 (537)
T ss_pred chHHHHHHHHhhcCCceEEEecccCccccccccccccchhhccccCC----Ccc-cccCCCCCeEEEecCCCCCCCCceE
Confidence 88887654 1444444432 1 111111111 111 3455669999999999999999999
Q ss_pred ecchHHHHHHHHHhhhhcccCCCCCCCCCCcEEEEecChhHHHHHHHHHHHHhc-CCeEEEecCCCHHHHHHHHHhcCee
Q 011116 150 LLSHLNVIAIIAGYYHVTEETDPNEGPPPHPVSFFTLPMFHVFGFFMLVRAASK-GETLVFMERFDFEKMLKAVENYRVT 228 (493)
Q Consensus 150 ~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pl~~~~g~~~~~~~l~~-G~~~~~~~~~~~~~~~~~l~~~~~t 228 (493)
.++|+++..+.......+.. ...++.++.+|++|.+|+..++.+++. |+++++...++++.+++.+++|++|
T Consensus 203 ~lsHr~~~~~~~~~~~~~~~-------~~~~v~l~~lPl~H~~Gl~~~~~~~~~~~~~ii~~~~f~~~~~~~~i~kykvt 275 (537)
T KOG1176|consen 203 VLSHRNLIANTLSIKIGWEL-------TSDDVYLCTLPLFHIYGLITLLLSLLAGGTTIICLRKFDAELFLDLIEKYKVT 275 (537)
T ss_pred EEecHHHHHHHHHhhhcccC-------CCCceEEEechHHHHhHHHHHHHHHHhCCceEEECCCCCHHHHHHHHHHhCEE
Confidence 99999998887765555433 568999999999999999877775555 5555555778999999999999999
Q ss_pred ecccChHHHHHHHhcccCCCCCCCCeeEEEecCCCCCHHHHHHHHHhCCCCceeccccccccCCccccccCCCCCCCCCc
Q 011116 229 YMPVSPPLIVAFINSKLTDKYDLSSLQLLGCGGAPLGKEVTLKFKEKFPNVEIRQGYGLTETGGAGSRVIGPDEAERHGS 308 (493)
Q Consensus 229 ~l~~~P~~~~~l~~~~~~~~~~l~~lr~v~~~Ge~~~~~~~~~~~~~~~~~~v~~~yG~tE~g~~~~~~~~~~~~~~~~~ 308 (493)
++.++|.++..|++.+.....+++++|.+.+||+++++++.+++++.+|...+.+.||+||+|+.++.+...++ ..+++
T Consensus 276 ~~~~vP~~~~~l~~~p~~~~~~l~sl~~v~~gga~~~~~~~~~~~~~l~~~~v~q~YGmTE~~~~~~~~~~~~e-~k~~s 354 (537)
T KOG1176|consen 276 HLFLVPPVLNMLAKSPIVKKYDLSSLRSVLSGGAPLSPATLEKVKERLPNVTVIQGYGMTEAGGLITSNDWGPE-RKPGS 354 (537)
T ss_pred EEEcChHHHHHHhcCCccCcccCCccEEEEecCCCCCHHHHHHHHHhCCCceEEEeeccccccCceeecCCCcc-Ccccc
Confidence 99999999999999886777889999999999999999999999999977999999999999987777555554 67899
Q ss_pred cccccCCceEEEEcCCCCccCCCCCceEEEEeCccccccccCCcccccccccCCCeeeccceEEEcCCCcEEEEcccCCe
Q 011116 309 VGRLAELMEAKIVDPATGEALPPGQKGELWLRGPTIMKGYVGDDKATSETVHSEGWLKTGDLCYFDSNGFLFIVDRLKEL 388 (493)
Q Consensus 309 ~g~p~~~~~~~i~d~~~~~~~~~g~~Gel~v~~~~~~~gy~~~~~~~~~~~~~~~~~~TgD~~~~~~~g~~~~~GR~~d~ 388 (493)
+|+++++++..+.+ ++|..+++++.||||++|++++.||+++|+.|.+.|+.+|||+|||+|++|+||++++.+|++|+
T Consensus 355 vG~~~~g~~~~v~~-e~g~~l~~~~~GEI~vrg~~imkGY~~NpeaT~~~~~~~GW~~TGDiGy~D~DG~l~IvdR~Kdl 433 (537)
T KOG1176|consen 355 VGRLLPGVRVKVLD-ETGVSLGPNQTGEICVRGPQVMKGYLKNPEATKEAFDDDGWFHTGDLGYFDEDGYLYIVDRSKDL 433 (537)
T ss_pred cCccccceEEEeeC-CCCCCCCCCCceEEEEECcccchhhcCChHHHHhhcccCCccccCceEEEcCCCeEEEecchhhh
Confidence 99999988888888 99999999999999999999999999999999999987899999999999999999999999999
Q ss_pred EEeCceeeChHHHHHHHhcCCCcceEEEEeeeCCCCCeeEEEEEEeCCCCCCCHHHHHHHHHhcCCCCCCcceEEEeccc
Q 011116 389 IKYKAYQVPPVELEHLLHSNPEIADAAVIPYPDEEAGQIPMAFVVRKPGSNITEAEIMDFIAKQVAPYKKIRRVAFINSI 468 (493)
Q Consensus 389 i~~~G~~i~~~~ie~~l~~~~~v~~~~v~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~l~~~l~~~~~p~~~~~~~~l 468 (493)
||.+|.+|+|.|||++|.+||.|.|++||+.+++..||.++|+||..++.+.+++++++.+++++++|+.|..++++++|
T Consensus 434 Ik~~G~qv~P~EiE~vL~~hP~V~eaaVvgipDe~~Ge~p~A~VV~k~g~~lte~di~~~v~k~l~~y~~~~~V~Fvd~l 513 (537)
T KOG1176|consen 434 IKYGGEQVSPAEIEAVLLTHPDVLEAAVVGIPDEVWGETPAAFVVLKKGSTLTEKDIIEYVRKKLPAYKLPGGVVFVDEL 513 (537)
T ss_pred eeeCCEEeCHHHHHHHHHhCCCccEEEEEcccccccCCcceEEEEecCCCcCCHHHHHHHHHhhCChhhccCeEEEeccC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cCCCCCccchHHHHHHHhhCCC
Q 011116 469 PKSTAGKILRRELVTHAISGNL 490 (493)
Q Consensus 469 P~t~~GK~~r~~l~~~~~~~~~ 490 (493)
|||++||+.|+.||+++.+...
T Consensus 514 PKs~~GKi~R~~lr~~~~~~~~ 535 (537)
T KOG1176|consen 514 PKTPNGKILRRKLRDIAKKLGS 535 (537)
T ss_pred CCCCcchHHHHHHHHHHHhccc
Confidence 9999999999999999988654
No 2
>COG0365 Acs Acyl-coenzyme A synthetases/AMP-(fatty) acid ligases [Lipid metabolism]
Probab=100.00 E-value=1.7e-74 Score=565.10 Aligned_cols=455 Identities=27% Similarity=0.400 Sum_probs=393.3
Q ss_pred ccchhhhHHHHHHhhCCCCCCCEEEEECCCCCCcHHHHHHHHHHcCCeeccCCCCCCHHHHHHHHhhcCCeEEEEcCCCc
Q 011116 12 NSSARFTLSHALSKRDSLCRKTTSLTSSPLPPSTSPVLYFSLLSLGVVISPANPLSSTSEVSHQIQLSKPSIAFATSHTS 91 (493)
Q Consensus 12 ~~~~~~~lA~~L~~~~gl~~gd~V~l~~~~~~~~~~~~~lA~~~~G~~~v~i~~~~~~~~l~~~l~~~~~~~il~~~~~~ 91 (493)
+.++|+ |+.|++..|+ +||||++++| +.+++++++|||+++|++.+|+.+.++++.+.+++++++++++|+.+...
T Consensus 48 ~~v~r~--A~~L~~~~gv-kGDrV~iymp-~~pe~~~a~LA~~riGAI~~~vf~~f~~~al~~Ri~d~~~k~vit~d~~~ 123 (528)
T COG0365 48 REVARL--ANALKDLGGV-KGDRVAIYMP-NSPEAVIALLATARIGAIPAVVSPGLSAEAVADRIADLGPKVLIADDGTF 123 (528)
T ss_pred HHHHHH--HHHHHHhCCC-CCCEEEEEcC-CCHHHHHHHHHHHHcCCEEeecccCCCHHHHHHHHHccCCCEEEEecccc
Confidence 446666 9999545788 9999999999 99999999999999999999999999999999999999999999998777
Q ss_pred ccCCC-----C---C--cEEEecC--chhhhhhccCcccccccCCCCCCCCCCeEEEEccCCCCCCccceecchHHHHHH
Q 011116 92 YKLPS-----N---L--RTILMDS--PEFISLLNQNEDVADFANSNMTVYQSDPAAILYSSGTTGKVKGVLLSHLNVIAI 159 (493)
Q Consensus 92 ~~~~~-----~---~--~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~TSGTTG~pK~v~~t~~~~~~~ 159 (493)
...+. . . .++.+.. ..|.+...... ........+.+|+++++|||||||+||+|+++|..+...
T Consensus 124 ~~gk~~~~~~~~~~~~~~~iv~~r~~~~~~~~~~~~~----~~~~~~~~~~~dpl~ilYTSGTTG~PKgv~H~~gg~l~~ 199 (528)
T COG0365 124 RNGKEIALLEDADAVLSSVVVVPRLGLWYDEAVEKAS----EKFEFEPLPADDPLFLLYTSGTTGKPKGIVHSHGGYLVE 199 (528)
T ss_pred cccccccchhHHHHhhcceEEeccccccHHHHhhccC----CCCCccccCCCCeEEEEeCCCCCCCCceEEEeCchHHHH
Confidence 75542 0 0 0233322 33444444331 133344588999999999999999999999999988887
Q ss_pred HHHhhhhcccCCCCCCCCCCcEEEEecChhHHHHH-HHHHHHHhcCCeEEEecC--C-CHHHHHHHHHhcCeeecccChH
Q 011116 160 IAGYYHVTEETDPNEGPPPHPVSFFTLPMFHVFGF-FMLVRAASKGETLVFMER--F-DFEKMLKAVENYRVTYMPVSPP 235 (493)
Q Consensus 160 ~~~~~~~~~~~~~~~~~~~~~~~~~~~pl~~~~g~-~~~~~~l~~G~~~~~~~~--~-~~~~~~~~l~~~~~t~l~~~P~ 235 (493)
......... .+.++|++++..+..|++|. ..+++++..|++.++.+. + +++.+++.++++++|.+++.|+
T Consensus 200 ~~~~~~~~~------~~~~~Dv~w~~ad~GW~~g~~~~v~~pL~~Gat~~~~eg~p~~~~~~~~~~ie~~~vt~~~tsPT 273 (528)
T COG0365 200 HRLTAKFHG------DLLPGDRFWNSSDPGWIYGLWYSVFSPLASGATTVLYDGRPFYSPERLWEALEKYKVTIFGTSPT 273 (528)
T ss_pred HHHHHHHhh------CCCCCCEEEeCCCchhhhCchHHHHHHHhcCCeEEEeCCCCCCCHHHHHHHHHHhCCceEeeCHH
Confidence 776655432 24699999999999999999 569999999999998843 2 4899999999999999999999
Q ss_pred HHHHHHhcccCCCCCCCCeeEEEecCCCCCHHHHHHHHHhCCCCceeccccccccCCccccccCCCCCCCCCccccccCC
Q 011116 236 LIVAFINSKLTDKYDLSSLQLLGCGGAPLGKEVTLKFKEKFPNVEIRQGYGLTETGGAGSRVIGPDEAERHGSVGRLAEL 315 (493)
Q Consensus 236 ~~~~l~~~~~~~~~~l~~lr~v~~~Ge~~~~~~~~~~~~~~~~~~v~~~yG~tE~g~~~~~~~~~~~~~~~~~~g~p~~~ 315 (493)
.++.|.+.......++++||.+.+.||+++++.++++.+.+ +++|.+.||+||+|........ ....++.|.|+||
T Consensus 274 ~~R~l~~~g~~~~~dlssLr~~~SaGEPLnpe~~~w~~~~~-g~~i~d~~gqTEtg~~~~~~~~---~~~~g~~g~p~pG 349 (528)
T COG0365 274 FLRRLMKLGLGEPYDLSSLRVLGSAGEPLNPEAFEWFYSAL-GVWILDIYGQTETGMGFIAGRP---PVKNGSSGLPLPG 349 (528)
T ss_pred HHHHHHhcCCcccccchhheeeeccCCCCCHHHHHHHHHHh-CCCEeccccccccCccccCCCC---CcCCCCCCCCCCC
Confidence 99999988765677899999999999999999999999999 7999999999999954443222 2344555999999
Q ss_pred ceEEEEcCCCCccCCCCCceEEEEeCc--cccccccCCcccccccccCCCeeeccceEEEcCCCcEEEEcccCCeEEeCc
Q 011116 316 MEAKIVDPATGEALPPGQKGELWLRGP--TIMKGYVGDDKATSETVHSEGWLKTGDLCYFDSNGFLFIVDRLKELIKYKA 393 (493)
Q Consensus 316 ~~~~i~d~~~~~~~~~g~~Gel~v~~~--~~~~gy~~~~~~~~~~~~~~~~~~TgD~~~~~~~g~~~~~GR~~d~i~~~G 393 (493)
+++.++|.+ ++++++|+ |+|+++.+ ..+++|+++++.+.+.+.+. ||.|||.+++|+||++||+||.||+||..|
T Consensus 350 ~~~~vvdd~-g~~~~~~~-G~Lvi~~~~p~~~~~~w~d~er~~~~y~~~-~y~tGD~~~~DedGy~~i~GR~DDvI~vsG 426 (528)
T COG0365 350 YAVRRVDDE-GNPVPPGV-GELVVRLPWPGMALTYWNDPERYKEAYFGR-WYRTGDWAERDEDGYFWLHGRSDDVIKVSG 426 (528)
T ss_pred ceeEEECCC-CCcCCCCc-eEEEEeCCCchhhhhhhCCHHHHHHHHhhc-eeecCceeEEccCCCEEEEeeccceEeccC
Confidence 999999955 99999999 99999986 88999999999999988644 999999999999999999999999999999
Q ss_pred eeeChHHHHHHHhcCCCcceEEEEeeeCCCCCeeEEEEEEeCCCCCCC--HHHHHHHHHhcCCCCCCcceEEEeccccCC
Q 011116 394 YQVPPVELEHLLHSNPEIADAAVIPYPDEEAGQIPMAFVVRKPGSNIT--EAEIMDFIAKQVAPYKKIRRVAFINSIPKS 471 (493)
Q Consensus 394 ~~i~~~~ie~~l~~~~~v~~~~v~~~~~~~~~~~~~~~v~~~~~~~~~--~~~l~~~l~~~l~~~~~p~~~~~~~~lP~t 471 (493)
.+|.+.|||++|.+||.|.||+|++.+++..|+.+++||++.++...+ .++|++++++.+.++..|++|.++++||||
T Consensus 427 ~Rig~~EvE~~l~~hP~VaEaAvVg~pd~~kg~~v~afVvL~~g~~~~~L~~ei~~~vr~~~~~~~~p~~i~fv~~LPkT 506 (528)
T COG0365 427 KRIGPLEIESVLLAHPAVAEAAVVGVPDPGKGQIVLAFVVLAAGVEPNELAEEIRRHVARNIGPHAIPRKIRFVDELPKT 506 (528)
T ss_pred eeccHHHHHHHHHhCcceeeeEEEeccCCCCCcEEEEEEEecCCCChHHHHHHHHHHHHhccCcccCCceEEEecCCCCC
Confidence 999999999999999999999999999999999999999999885444 356777787788889999999999999999
Q ss_pred CCCccchHHHHHHHhh
Q 011116 472 TAGKILRRELVTHAIS 487 (493)
Q Consensus 472 ~~GK~~r~~l~~~~~~ 487 (493)
.|||+.|+.||+.+.+
T Consensus 507 ~sGKI~R~~lr~~~~~ 522 (528)
T COG0365 507 ASGKIQRRLLRKILHK 522 (528)
T ss_pred CcccHHHHHHHHHHhh
Confidence 9999999999999884
No 3
>KOG1177 consensus Long chain fatty acid acyl-CoA ligase [Lipid transport and metabolism]
Probab=100.00 E-value=9.8e-73 Score=518.15 Aligned_cols=461 Identities=30% Similarity=0.410 Sum_probs=403.4
Q ss_pred hhhHHHHHHhhCCCCCCCEEEEECCCCCCcHHHHHHHHHHcCCeeccCCCCCCHHHHHHHHhhcCCeEEEEcCCCcc---
Q 011116 16 RFTLSHALSKRDSLCRKTTSLTSSPLPPSTSPVLYFSLLSLGVVISPANPLSSTSEVSHQIQLSKPSIAFATSHTSY--- 92 (493)
Q Consensus 16 ~~~lA~~L~~~~gl~~gd~V~l~~~~~~~~~~~~~lA~~~~G~~~v~i~~~~~~~~l~~~l~~~~~~~il~~~~~~~--- 92 (493)
..+||++| .+.|+++||||++..| |+.+|+..++||+++|.+.+++||++...++...|+..++++++..+....
T Consensus 87 v~slAaGl-l~lGL~kGDrVgvwgp-N~~~w~l~~lA~A~AG~v~v~~NP~Yq~~elr~~L~k~~~k~l~~p~~~k~~ny 164 (596)
T KOG1177|consen 87 VESLAAGL-LSLGLKKGDRVGVWGP-NSYEWVLCQLACARAGLVLVNLNPAYQSEELRYVLKKVGCKALFAPPQFKTQNY 164 (596)
T ss_pred HHHHHhhH-HhhcCCCCCEEEEecC-ChHHHHHHHHHHHHhceEEeccCcccccHHHHHHHhhcCeEEEEccchhhhchH
Confidence 34579999 8899999999999999 999999999999999999999999999999999999999999999753222
Q ss_pred -----------------cCCC----CCc-EEEecCch-------hhhhhccCc--ccccccCCCCCCCCCCeEEEEccCC
Q 011116 93 -----------------KLPS----NLR-TILMDSPE-------FISLLNQNE--DVADFANSNMTVYQSDPAAILYSSG 141 (493)
Q Consensus 93 -----------------~~~~----~~~-~~~~~~~~-------~~~~~~~~~--~~~~~~~~~~~~~~~~~~~i~~TSG 141 (493)
.++. .++ ++..+++. +.+.+.... .............++|++.|.||||
T Consensus 165 ~~~l~~icPEv~~~~~G~lkS~~lp~lthvi~~~ed~~~~Ga~~~sev~~~~s~~~~a~l~~~~k~~~pdd~~niQFTSG 244 (596)
T KOG1177|consen 165 YETLLEICPEVMRGDPGQLKSELLPELTHVILADEDHPLPGAFLLSEVLKAASKEERAKLADMSKWLSPDDAVNIQFTSG 244 (596)
T ss_pred HHHHHHhhHHhhcCCCccccccccccceEEEecCCCCcCCCceehHHHHHhcchHHHHHHHhhhhhcCCCCceEEEeccC
Confidence 1111 333 33333111 333333221 1112233345667899999999999
Q ss_pred CCCCccceecchHHHHHHHHHhhhhcccCCCCCCCCCCcEEEEecChhHHHHH-HHHHHHHhcCCeEEEe-cCCCHHHHH
Q 011116 142 TTGKVKGVLLSHLNVIAIIAGYYHVTEETDPNEGPPPHPVSFFTLPMFHVFGF-FMLVRAASKGETLVFM-ERFDFEKML 219 (493)
Q Consensus 142 TTG~pK~v~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pl~~~~g~-~~~~~~l~~G~~~~~~-~~~~~~~~~ 219 (493)
|||.||++.+||.+++++........ |+...+++++..|++|.+|. ...+.++..|++++++ +.+++...+
T Consensus 245 TTG~PKgatLsH~~~~Nna~~vg~r~-------g~~e~~~i~~~~Pl~H~~G~~~~~ma~l~~gat~Vfp~~~f~~k~al 317 (596)
T KOG1177|consen 245 TTGAPKGATLSHYNFLNNARAVGARA-------GYNEKHRICIPNPLYHCFGCVLGVMAALMHGATIVFPAPSFDPKDAL 317 (596)
T ss_pred CCCCCcceeeehhhhhhhHHHHHHHh-------CcCcceEEEecCchHHHHHHHHHHHHHHHhCcEEEeeCCCCChHHHH
Confidence 99999999999999999999888887 44778899999999999996 7899999999999997 668999999
Q ss_pred HHHHhcCeeecccChHHHHHHHhcccCCCCCCCCeeEEEecCCCCCHHHHHHHHHhCCCC-ceeccccccccCCcccccc
Q 011116 220 KAVENYRVTYMPVSPPLIVAFINSKLTDKYDLSSLQLLGCGGAPLGKEVTLKFKEKFPNV-EIRQGYGLTETGGAGSRVI 298 (493)
Q Consensus 220 ~~l~~~~~t~l~~~P~~~~~l~~~~~~~~~~l~~lr~v~~~Ge~~~~~~~~~~~~~~~~~-~v~~~yG~tE~g~~~~~~~ 298 (493)
+++.++++|.++++|+++..|++.+...+.+++++|..+.||+++++++.+.+.+.. +. .+...||+||+++..+...
T Consensus 318 qai~~ekcT~l~gtPtM~~Dlln~~~~~~~~~s~lr~~vigGa~~s~eLlk~iv~~~-~m~~i~v~YG~TEts~v~~~~~ 396 (596)
T KOG1177|consen 318 QAISNEKCTTLYGTPTMFVDLLNIPQKQQVDLSSLRKGVIGGAPVSPELLKLIVNQM-NMKDIAVAYGLTETSPVLFMSL 396 (596)
T ss_pred HHHHhhceEEEecChHHHHHHhcchhhccCchhhhhhheeCCCCCCHHHHHHHHHhh-CceeeEEEeeccccCcceeeec
Confidence 999999999999999999999999988999999999999999999999999999865 33 3777899999998666532
Q ss_pred CCC-CCCCCCccccccCCceEEEEcCCCCccCCCCCceEEEEeCccccccccCCcccccccccCCCeeeccceEEEcCCC
Q 011116 299 GPD-EAERHGSVGRLAELMEAKIVDPATGEALPPGQKGELWLRGPTIMKGYVGDDKATSETVHSEGWLKTGDLCYFDSNG 377 (493)
Q Consensus 299 ~~~-~~~~~~~~g~p~~~~~~~i~d~~~~~~~~~g~~Gel~v~~~~~~~gy~~~~~~~~~~~~~~~~~~TgD~~~~~~~g 377 (493)
..+ ......++|+.++..+..++| ..|..++.|..|||+++|+..+.|||++++.+.++...+.||+|||.+.+|++|
T Consensus 397 ~~D~~~~~~ksVG~~m~h~Ea~iv~-~~g~~v~~~~~Gel~iRGY~tMl~Ywg~~~kT~eti~~drW~~TGDi~~m~enG 475 (596)
T KOG1177|consen 397 LGDPPEERIKSVGHLMDHYEAAIVD-KDGSEVPLGTKGELLIRGYSTMLGYWGEEEKTKETIGNDRWYDTGDIAVMDENG 475 (596)
T ss_pred CCCCHHHHHhhhhhccccccccccc-CCCCccccCCCceEEEEechhheeecCCcccchhhcccccceecCceEEEcCCC
Confidence 222 233557899999999999999 889999999999999999999999999999999999889999999999999999
Q ss_pred cEEEEcccCCeEEeCceeeChHHHHHHHhcCCCcceEEEEeeeCCCCCeeEEEEEEeCCCCC--CCHHHHHHHHHhcCCC
Q 011116 378 FLFIVDRLKELIKYKAYQVPPVELEHLLHSNPEIADAAVIPYPDEEAGQIPMAFVVRKPGSN--ITEAEIMDFIAKQVAP 455 (493)
Q Consensus 378 ~~~~~GR~~d~i~~~G~~i~~~~ie~~l~~~~~v~~~~v~~~~~~~~~~~~~~~v~~~~~~~--~~~~~l~~~l~~~l~~ 455 (493)
.+++.||++|+|+.+|++|+|.|||+.|.+||.|.++.|++++++..|+.+++.|.++.+.. .+.++|+++|+.++..
T Consensus 476 ~i~iVGRskdmI~rGGENVyP~ElE~fL~~hp~V~~a~VVGV~D~R~GE~VCA~vRLqe~~e~~~t~E~lKa~Ck~klaH 555 (596)
T KOG1177|consen 476 TIEIVGRSKDMIIRGGENVYPTELEDFLNKHPLVKEAHVVGVPDERLGEEVCACVRLQEGAEGKTTAETLKAMCKGKLAH 555 (596)
T ss_pred cEEEEEcccCeEEeCCcccChHHHHHHHhhCCCeeeEEEEccCCCcccceEEEEEEeeccccccccHHHHHHHHhccccc
Confidence 99999999999999999999999999999999999999999999999999999999987754 4789999999999999
Q ss_pred CCCcceEEEeccccCCCCCccchHHHHHHHhh
Q 011116 456 YKKIRRVAFINSIPKSTAGKILRRELVTHAIS 487 (493)
Q Consensus 456 ~~~p~~~~~~~~lP~t~~GK~~r~~l~~~~~~ 487 (493)
+++|+.|++++++|+|.|||+.|..+|++...
T Consensus 556 FKiPky~vf~~~FPlT~tGKIqKFeir~~~k~ 587 (596)
T KOG1177|consen 556 FKIPKYFVFVDEFPLTTTGKIQKFEIREMSKG 587 (596)
T ss_pred ccCCcEEEEeccCcccccccchhHHHHHHHHh
Confidence 99999999999999999999999999999874
No 4
>COG0318 CaiC Acyl-CoA synthetases (AMP-forming)/AMP-acid ligases II [Lipid metabolism / Secondary metabolites biosynthesis, transport, and catabolism]
Probab=100.00 E-value=1.2e-70 Score=560.38 Aligned_cols=466 Identities=35% Similarity=0.562 Sum_probs=396.2
Q ss_pred cccchhhhHHHHHHhhCCCCCCCEEEEECCCCCCcHHHHHHHHHHcCCeeccCCCCCCHHHHHHHHhhcCCeEEEEcCCC
Q 011116 11 ANSSARFTLSHALSKRDSLCRKTTSLTSSPLPPSTSPVLYFSLLSLGVVISPANPLSSTSEVSHQIQLSKPSIAFATSHT 90 (493)
Q Consensus 11 ~~~~~~~~lA~~L~~~~gl~~gd~V~l~~~~~~~~~~~~~lA~~~~G~~~v~i~~~~~~~~l~~~l~~~~~~~il~~~~~ 90 (493)
.+++.++ |.+| .+.|+++||+|+++++ |++++++++|||+++|++++|++|.++..++.++++.++++.++++...
T Consensus 45 ~~~~~~~--A~~L-~~~~v~~gdrVail~~-N~~e~~~~~~a~~~~Gav~vpln~~~~~~~l~~~l~~~~~~~~~~~~~~ 120 (534)
T COG0318 45 DRRANRL--AAAL-QALGVKPGDRVAILLP-NSPEFLIAFLAALRAGAVAVPLNPRLTPRELAYILNDAGAKVLITSAEF 120 (534)
T ss_pred HHHHHHH--HHHH-HHcCCCCCCEEEEECC-CCHHHHHHHHHHHhcCEEEeecCcccCHHHHHHHHHhcCCeEEEEcccc
Confidence 3445555 9999 7778999999999999 9999999999999999999999999999999999999999999999873
Q ss_pred cccCCC---C---Cc-EEEecCc------hhhhhhccCcccccccCCCCCCCCCCeEEEEccCCCCCCccceecchHHHH
Q 011116 91 SYKLPS---N---LR-TILMDSP------EFISLLNQNEDVADFANSNMTVYQSDPAAILYSSGTTGKVKGVLLSHLNVI 157 (493)
Q Consensus 91 ~~~~~~---~---~~-~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~TSGTTG~pK~v~~t~~~~~ 157 (493)
...+.. . .. +...... .+........ .........+++++++++|||||||.||+|++||+++.
T Consensus 121 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~d~a~i~yTSGTTG~PKgv~~th~~~~ 197 (534)
T COG0318 121 AALLEAVAEALPVVLVVLLVGDADDRLPITLEALAAEGP---GPDADARPVDPDDLAFLLYTSGTTGLPKGVVLTHRNLL 197 (534)
T ss_pred hhHHHHHhccCCcceEEEecccccccccccHHHHhhccC---CcccccCCCCCCCEEEEEeCCCCCCCCCEeEEecHhHH
Confidence 222211 1 11 1111111 2333322221 11111122678999999999999999999999999999
Q ss_pred HHHHHhhhhcccCCCCCCCCCCcEEEEecChhHHHHHHH-HHHHHhcCCeEEEec--CCCHHHHHHHHHhcCeeecccCh
Q 011116 158 AIIAGYYHVTEETDPNEGPPPHPVSFFTLPMFHVFGFFM-LVRAASKGETLVFME--RFDFEKMLKAVENYRVTYMPVSP 234 (493)
Q Consensus 158 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pl~~~~g~~~-~~~~l~~G~~~~~~~--~~~~~~~~~~l~~~~~t~l~~~P 234 (493)
.+.......+.. .+.+.|++++.+|++|.+|+.. ++..++.|+++++.+ .++++.++..+.++++|++.++|
T Consensus 198 ~~~~~~~~~~~~-----~~~~~d~~l~~lPl~H~~Gl~~~~~~~~~~G~~~v~~~~~~f~~~~~~~~i~~~~~t~~~~vP 272 (534)
T COG0318 198 ANAAGIAAALGG-----GLTPDDVVLSWLPLFHIFGLIVGLLAPLLGGGTLVLLSPEPFDPEEVLWLIEKYKVTVLSGVP 272 (534)
T ss_pred HHHHHHHHHhcc-----cCCCCceEEEecChHHHHHHHHHHHHHHHcCCEEEeCCCCCcCHHHHHHHHHHhcceEEecch
Confidence 888877777641 0478899999999999999965 555599999999987 58999999999999999999999
Q ss_pred HHHHHHHhcccCCCCCCCC-eeEEEecCCCCCHHHHHHHHHhCCCCceeccccccccCCccccccCCCCCCCCCcccccc
Q 011116 235 PLIVAFINSKLTDKYDLSS-LQLLGCGGAPLGKEVTLKFKEKFPNVEIRQGYGLTETGGAGSRVIGPDEAERHGSVGRLA 313 (493)
Q Consensus 235 ~~~~~l~~~~~~~~~~l~~-lr~v~~~Ge~~~~~~~~~~~~~~~~~~v~~~yG~tE~g~~~~~~~~~~~~~~~~~~g~p~ 313 (493)
+++..++........++.. +|.++.||+++++++.+++++.|+...+++.||+||++...+...........+..|+|.
T Consensus 273 t~~~~ll~~~~~~~~~~~~~lr~~~~gg~~~~~~~~~~~~~~~~~~~i~~~YG~TE~~~~~~~~~~~~~~~~~~~~G~~~ 352 (534)
T COG0318 273 TFLRELLDNPEKDDDDLSSSLRLVLSGGAPLPPELLERFEERFGPIAILEGYGLTETSPVVTINPPDDLLAKPGSVGRPL 352 (534)
T ss_pred HHHHHHHhCCccCccccccceEEEEecCCcCCHHHHHHHHHHhCCCceEEeecccccCceeecCCCchhhhcCCcccccC
Confidence 9999999988776666665 999999999999999999999995568999999999987666533322013566779999
Q ss_pred CCceEEEEcCCCCccCCCCCceEEEEeCccccccccCCcccccccccCCCeeeccceEEEcCCCcEEEEcccCCeEEeCc
Q 011116 314 ELMEAKIVDPATGEALPPGQKGELWLRGPTIMKGYVGDDKATSETVHSEGWLKTGDLCYFDSNGFLFIVDRLKELIKYKA 393 (493)
Q Consensus 314 ~~~~~~i~d~~~~~~~~~g~~Gel~v~~~~~~~gy~~~~~~~~~~~~~~~~~~TgD~~~~~~~g~~~~~GR~~d~i~~~G 393 (493)
++++++|+|++++.+++ |++|||+++||.++.||+++|+.+.+.|+.+|||+|||+|++|++|++++.||.+|+|+.+|
T Consensus 353 pg~~v~Ivd~~~~~~~p-g~vGei~irgp~v~~GY~~~pe~t~~~f~~~gW~~TGDlg~~d~~G~l~i~gR~kd~I~~gG 431 (534)
T COG0318 353 PGVEVRIVDPDGGEVLP-GEVGEIWVRGPNVMKGYWNRPEATAEAFDEDGWLRTGDLGYVDEDGYLYIVGRLKDLIISGG 431 (534)
T ss_pred CCcEEEEEeCCCCccCC-CCceEEEEECchhhhhhcCChHHHHHhhccCCeeeecceEEEcCCccEEEEeccceEEEeCC
Confidence 99999999977776666 99999999999999999999999999886569999999999999999999999999999999
Q ss_pred eeeChHHHHHHHhcCCCcceEEEEeeeCCCCCeeEEEEEEeCCC--CCCCHHHHHHHHHhcCCCCCCcceEEEeccccCC
Q 011116 394 YQVPPVELEHLLHSNPEIADAAVIPYPDEEAGQIPMAFVVRKPG--SNITEAEIMDFIAKQVAPYKKIRRVAFINSIPKS 471 (493)
Q Consensus 394 ~~i~~~~ie~~l~~~~~v~~~~v~~~~~~~~~~~~~~~v~~~~~--~~~~~~~l~~~l~~~l~~~~~p~~~~~~~~lP~t 471 (493)
++|+|.+||+++.++|.|.+++|++++++.+|+.+++++++.++ ...+++++.++++++++.+++|+.+.++++||+|
T Consensus 432 ~ni~p~eiE~~l~~~~~V~~aavvgvpd~~~Ge~~~a~v~~~~~~~~~~~~~~i~~~~~~~l~~~~~P~~v~~v~~lP~t 511 (534)
T COG0318 432 ENIYPEEIEAVLAEHPAVAEAAVVGVPDERWGERVVAVVVLKPGGDAELTAEELRAFLRKRLALYKVPRIVVFVDELPRT 511 (534)
T ss_pred eEECHHHHHHHHHhCCCcceEEEEeCCCCccCceEEEEEEEcCCCCCCCCHHHHHHHHHhhhhcccCCeEEEEeCCCCCC
Confidence 99999999999999999999999999999999999999999876 3458899999999999999999999999999999
Q ss_pred CCCccchHHHHHHHhhCC
Q 011116 472 TAGKILRRELVTHAISGN 489 (493)
Q Consensus 472 ~~GK~~r~~l~~~~~~~~ 489 (493)
++||++|+.||+.+....
T Consensus 512 ~sGKi~r~~lr~~~~~~~ 529 (534)
T COG0318 512 ASGKIDRRALREEYRAEP 529 (534)
T ss_pred CchhhhHHHHHHHHHhhh
Confidence 999999999999988743
No 5
>PLN02574 4-coumarate--CoA ligase-like
Probab=100.00 E-value=2.6e-68 Score=549.42 Aligned_cols=468 Identities=41% Similarity=0.721 Sum_probs=397.2
Q ss_pred hHHHHHHhh-CCCCCCCEEEEECCCCCCcHHHHHHHHHHcCCeeccCCCCCCHHHHHHHHhhcCCeEEEEcCCCcccCCC
Q 011116 18 TLSHALSKR-DSLCRKTTSLTSSPLPPSTSPVLYFSLLSLGVVISPANPLSSTSEVSHQIQLSKPSIAFATSHTSYKLPS 96 (493)
Q Consensus 18 ~lA~~L~~~-~gl~~gd~V~l~~~~~~~~~~~~~lA~~~~G~~~v~i~~~~~~~~l~~~l~~~~~~~il~~~~~~~~~~~ 96 (493)
++|++| .+ .|+++||+|+++++ |+++++++++||+++|++++|++|..+.+++.++++.++++.++++++....+.+
T Consensus 78 ~lA~~L-~~~~G~~~gd~V~i~~~-n~~~~~~~~la~~~~G~v~v~l~p~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~ 155 (560)
T PLN02574 78 SMAAGL-YHVMGVRQGDVVLLLLP-NSVYFPVIFLAVLSLGGIVTTMNPSSSLGEIKKRVVDCSVGLAFTSPENVEKLSP 155 (560)
T ss_pred HHHHHH-HHHhCCCCCCEEEEECC-CcchHHHHHHHHHHhCeEEeCcCcccCHHHHHHHHHhcCCEEEEECHHHHHHHHh
Confidence 359999 65 89999999999999 9999999999999999999999999999999999999999999998765444332
Q ss_pred -CCcEEEecC-----------chhhhhhccCcccccccCCCCCCCCCCeEEEEccCCCCCCccceecchHHHHHHHHHhh
Q 011116 97 -NLRTILMDS-----------PEFISLLNQNEDVADFANSNMTVYQSDPAAILYSSGTTGKVKGVLLSHLNVIAIIAGYY 164 (493)
Q Consensus 97 -~~~~~~~~~-----------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~TSGTTG~pK~v~~t~~~~~~~~~~~~ 164 (493)
...++.++. ..|..+..... .........++++++++|||||||.||+|.++|.++...+..+.
T Consensus 156 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~a~i~~TSGTTG~PKgV~~sh~~~~~~~~~~~ 231 (560)
T PLN02574 156 LGVPVIGVPENYDFDSKRIEFPKFYELIKEDF----DFVPKPVIKQDDVAAIMYSSGTTGASKGVVLTHRNLIAMVELFV 231 (560)
T ss_pred cCCcEEecCcccccccCccCcccHHHHhhcCC----cccccCCCCcCCEEEEEcCCCccCCCcEEEEeHHHHHHHHHHHH
Confidence 222332221 11222222211 11112234578999999999999999999999999988776554
Q ss_pred hhcccCCCCCCCCCCcEEEEecChhHHHHH-HHHHHHHhcCCeEEEecCCCHHHHHHHHHhcCeeecccChHHHHHHHhc
Q 011116 165 HVTEETDPNEGPPPHPVSFFTLPMFHVFGF-FMLVRAASKGETLVFMERFDFEKMLKAVENYRVTYMPVSPPLIVAFINS 243 (493)
Q Consensus 165 ~~~~~~~~~~~~~~~~~~~~~~pl~~~~g~-~~~~~~l~~G~~~~~~~~~~~~~~~~~l~~~~~t~l~~~P~~~~~l~~~ 243 (493)
....... ......++++..+|++|..++ ..++.++..|+++++.+.+++..+++.++++++|++.++|+++..|++.
T Consensus 232 ~~~~~~~--~~~~~~~~~l~~~pl~h~~g~~~~~~~~l~~G~~~v~~~~~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~ 309 (560)
T PLN02574 232 RFEASQY--EYPGSDNVYLAALPMFHIYGLSLFVVGLLSLGSTIVVMRRFDASDMVKVIDRFKVTHFPVVPPILMALTKK 309 (560)
T ss_pred hcccccc--ccCCCCcEEEEecchHHHHHHHHHHHHHHhcCCEEEEecCCCHHHHHHHHHHcCCeEEecCCHHHHHHHhC
Confidence 3211100 011356788999999999998 4567778899999999888999999999999999999999999999887
Q ss_pred ccC-CCCCCCCeeEEEecCCCCCHHHHHHHHHhCCCCceeccccccccCCccccccCCCCCCCCCccccccCCceEEEEc
Q 011116 244 KLT-DKYDLSSLQLLGCGGAPLGKEVTLKFKEKFPNVEIRQGYGLTETGGAGSRVIGPDEAERHGSVGRLAELMEAKIVD 322 (493)
Q Consensus 244 ~~~-~~~~l~~lr~v~~~Ge~~~~~~~~~~~~~~~~~~v~~~yG~tE~g~~~~~~~~~~~~~~~~~~g~p~~~~~~~i~d 322 (493)
... ....++++|.+++||+++++++.+++.+.|+++.+++.||+||++...+............++|+|.++++++|+|
T Consensus 310 ~~~~~~~~~~~lr~~~~gg~~l~~~~~~~~~~~~~~~~v~~~YG~tE~~~~~~~~~~~~~~~~~~~vG~~~~~~~v~i~d 389 (560)
T PLN02574 310 AKGVCGEVLKSLKQVSCGAAPLSGKFIQDFVQTLPHVDFIQGYGMTESTAVGTRGFNTEKLSKYSSVGLLAPNMQAKVVD 389 (560)
T ss_pred ccccccCccccceEEEEecccCCHHHHHHHHHHCCCCcEEecccccccCceeecCCCccccCCCCceeeeCCCcEEEEEe
Confidence 543 3455789999999999999999999999998899999999999986554322222334567899999999999999
Q ss_pred CCCCccCCCCCceEEEEeCccccccccCCcccccccccCCCeeeccceEEEcCCCcEEEEcccCCeEEeCceeeChHHHH
Q 011116 323 PATGEALPPGQKGELWLRGPTIMKGYVGDDKATSETVHSEGWLKTGDLCYFDSNGFLFIVDRLKELIKYKAYQVPPVELE 402 (493)
Q Consensus 323 ~~~~~~~~~g~~Gel~v~~~~~~~gy~~~~~~~~~~~~~~~~~~TgD~~~~~~~g~~~~~GR~~d~i~~~G~~i~~~~ie 402 (493)
++++++++.|+.|||+++|+.++.||+++++.+.+.|+.+|||+|||+++++++|++++.||.+|+||++|++|++.+||
T Consensus 390 ~~~g~~~~~g~~Gei~v~g~~~~~GY~~~~~~t~~~~~~~g~~~TGDlg~~~~~G~l~i~GR~~d~i~~~G~~v~~~eiE 469 (560)
T PLN02574 390 WSTGCLLPPGNCGELWIQGPGVMKGYLNNPKATQSTIDKDGWLRTGDIAYFDEDGYLYIVDRLKEIIKYKGFQIAPADLE 469 (560)
T ss_pred CCCCcCCCCCCCeEEEEECcchhhhhcCChhHhhhhccCCCCcccceEEEEECCCeEEEEecchhheEECCEEECHHHHH
Confidence 88899999999999999999999999999999998888899999999999999999999999999999999999999999
Q ss_pred HHHhcCCCcceEEEEeeeCCCCCeeEEEEEEeCCCCCCCHHHHHHHHHhcCCCCCCcceEEEeccccCCCCCccchHHHH
Q 011116 403 HLLHSNPEIADAAVIPYPDEEAGQIPMAFVVRKPGSNITEAEIMDFIAKQVAPYKKIRRVAFINSIPKSTAGKILRRELV 482 (493)
Q Consensus 403 ~~l~~~~~v~~~~v~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~l~~~l~~~~~p~~~~~~~~lP~t~~GK~~r~~l~ 482 (493)
.+|.++|+|.+++|++.+++..++.++++++..++...+.+++.+++++++++++.|+.+.+++++|+|++||++|+.|+
T Consensus 470 ~~l~~~~~V~~~~v~~~~~~~~g~~~~a~v~~~~~~~~~~~~l~~~~~~~l~~~~~p~~v~~v~~iP~t~~GKi~r~~L~ 549 (560)
T PLN02574 470 AVLISHPEIIDAAVTAVPDKECGEIPVAFVVRRQGSTLSQEAVINYVAKQVAPYKKVRKVVFVQSIPKSPAGKILRRELK 549 (560)
T ss_pred HHHHhCCCcceEEEEccccCCCCcceEEEEEeCCCCCCCHHHHHHHHHHhccCcccCcEEEEeeccCCCCcchhhHHHHH
Confidence 99999999999999999988888889999998877777889999999999999999999999999999999999999999
Q ss_pred HHHhhCCCCCC
Q 011116 483 THAISGNLSKL 493 (493)
Q Consensus 483 ~~~~~~~~~~~ 493 (493)
+++.....++|
T Consensus 550 ~~~~~~~~~~~ 560 (560)
T PLN02574 550 RSLTNSVSSRL 560 (560)
T ss_pred HHHhhccccCC
Confidence 99999888775
No 6
>PLN02654 acetate-CoA ligase
Probab=100.00 E-value=5.4e-68 Score=554.78 Aligned_cols=457 Identities=22% Similarity=0.296 Sum_probs=380.1
Q ss_pred hHHHHHHhhCCCCCCCEEEEECCCCCCcHHHHHHHHHHcCCeeccCCCCCCHHHHHHHHhhcCCeEEEEcCCCcccCCC-
Q 011116 18 TLSHALSKRDSLCRKTTSLTSSPLPPSTSPVLYFSLLSLGVVISPANPLSSTSEVSHQIQLSKPSIAFATSHTSYKLPS- 96 (493)
Q Consensus 18 ~lA~~L~~~~gl~~gd~V~l~~~~~~~~~~~~~lA~~~~G~~~v~i~~~~~~~~l~~~l~~~~~~~il~~~~~~~~~~~- 96 (493)
++|++| ++.|+++||+|+++++ |++++++++|||+++|++++|+++.++.+++.+++++++++++|+++......+.
T Consensus 132 ~lA~~L-~~~Gv~~GdrV~i~~p-n~~e~v~a~lA~~~~Gav~vpv~~~~~~~~l~~~l~~~~~~~li~~~~~~~~~k~~ 209 (666)
T PLN02654 132 QLANYL-KDVGVKKGDAVVIYLP-MLMELPIAMLACARIGAVHSVVFAGFSAESLAQRIVDCKPKVVITCNAVKRGPKTI 209 (666)
T ss_pred HHHHHH-HHcCCCCCCEEEEEcC-CCHHHHHHHHHHHHcCCEEEecCCCCCHHHHHHHHHhcCceEEEEcCccccCCccc
Confidence 349999 8899999999999999 9999999999999999999999999999999999999999999998764332110
Q ss_pred ----------------CC---cEEEecCc----------------hhhhhhccCcccccccCCCCCCCCCCeEEEEccCC
Q 011116 97 ----------------NL---RTILMDSP----------------EFISLLNQNEDVADFANSNMTVYQSDPAAILYSSG 141 (493)
Q Consensus 97 ----------------~~---~~~~~~~~----------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~TSG 141 (493)
.. .++..... .|.++.... +..........+++++|+||||
T Consensus 210 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~d~~~ilyTSG 285 (666)
T PLN02654 210 NLKDIVDAALDESAKNGVSVGICLTYENQLAMKREDTKWQEGRDVWWQDVVPNY----PTKCEVEWVDAEDPLFLLYTSG 285 (666)
T ss_pred chHHHHHHHHHhccccCCCccEEEEecccccccccccccccCCcccHHHHhhcC----CCCCCceecCCCCceEEEecCC
Confidence 00 01111110 011111110 0011122356799999999999
Q ss_pred CCCCccceecchHHHHHHHHH-hhhhcccCCCCCCCCCCcEEEEecChhHHHHH-HHHHHHHhcCCeEEEecC----CCH
Q 011116 142 TTGKVKGVLLSHLNVIAIIAG-YYHVTEETDPNEGPPPHPVSFFTLPMFHVFGF-FMLVRAASKGETLVFMER----FDF 215 (493)
Q Consensus 142 TTG~pK~v~~t~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~pl~~~~g~-~~~~~~l~~G~~~~~~~~----~~~ 215 (493)
|||.||||+++|.+++..... ....+ +++++|++++..|++|+.+. +.++.++..|+++++.+. .++
T Consensus 286 TTG~PKgVv~sh~~~~~~~~~~~~~~~-------~~~~~d~~~~~~~~~~~~g~~~~~~~~L~~G~tvvl~~~~~~~~~~ 358 (666)
T PLN02654 286 STGKPKGVLHTTGGYMVYTATTFKYAF-------DYKPTDVYWCTADCGWITGHSYVTYGPMLNGATVLVFEGAPNYPDS 358 (666)
T ss_pred CCCCCceEEecccHHHHHHHHHHHHhc-------CCCCCcEEEEcCCchhhhhhHHHHHHHHHcCceEEEECCCCCCCCH
Confidence 999999999999998654433 33333 34889999999999999987 668899999999999853 478
Q ss_pred HHHHHHHHhcCeeecccChHHHHHHHhccc--CCCCCCCCeeEEEecCCCCCHHHHHHHHHhCCC--CceeccccccccC
Q 011116 216 EKMLKAVENYRVTYMPVSPPLIVAFINSKL--TDKYDLSSLQLLGCGGAPLGKEVTLKFKEKFPN--VEIRQGYGLTETG 291 (493)
Q Consensus 216 ~~~~~~l~~~~~t~l~~~P~~~~~l~~~~~--~~~~~l~~lr~v~~~Ge~~~~~~~~~~~~~~~~--~~v~~~yG~tE~g 291 (493)
..+++.++++++|++.++|++++.|.+... ....+++++|.++++||++++++++++.+.++. +++.+.||+||+|
T Consensus 359 ~~~~~~i~~~~vt~~~~~P~~~~~l~~~~~~~~~~~~l~~Lr~i~~~Ge~l~~~~~~~~~~~~g~~~~~i~~~yg~TE~g 438 (666)
T PLN02654 359 GRCWDIVDKYKVTIFYTAPTLVRSLMRDGDEYVTRHSRKSLRVLGSVGEPINPSAWRWFFNVVGDSRCPISDTWWQTETG 438 (666)
T ss_pred HHHHHHHHHhCCeEEEeCHHHHHHHHhhCccccccCChhheeEEEEecCCCCHHHHHHHHHHhCCCCCceeccccccccC
Confidence 999999999999999999999999987653 234567899999999999999999999999842 7899999999998
Q ss_pred CccccccCCCCCCCCCccccccCCceEEEEcCCCCccCCCCCceEEEEeC--ccccccccCCcccccccccC--CCeeec
Q 011116 292 GAGSRVIGPDEAERHGSVGRLAELMEAKIVDPATGEALPPGQKGELWLRG--PTIMKGYVGDDKATSETVHS--EGWLKT 367 (493)
Q Consensus 292 ~~~~~~~~~~~~~~~~~~g~p~~~~~~~i~d~~~~~~~~~g~~Gel~v~~--~~~~~gy~~~~~~~~~~~~~--~~~~~T 367 (493)
+..............+++|+|.+|++++|+| ++++.++.++.|||++++ |.+++||+++++.+...+.. +|||+|
T Consensus 439 ~~~~~~~~~~~~~~~gs~G~p~~g~~v~i~d-~~g~~~~~~~~Gel~v~~~~p~~~~gy~~~~~~~~~~~~~~~~g~~~T 517 (666)
T PLN02654 439 GFMITPLPGAWPQKPGSATFPFFGVQPVIVD-EKGKEIEGECSGYLCVKKSWPGAFRTLYGDHERYETTYFKPFAGYYFS 517 (666)
T ss_pred CeeeccCCCCCCCCCCccCCCCCCceEEEEC-CCCCCCCCCCceEEEEcCCCchhhhhhcCChHHHHHhhhhcCCCEEEe
Confidence 7554321111123567899999999999999 678889888899999998 78999999999887766532 689999
Q ss_pred cceEEEcCCCcEEEEcccCCeEEeCceeeChHHHHHHHhcCCCcceEEEEeeeCCCCCeeEEEEEEeCCCCCCCH---HH
Q 011116 368 GDLCYFDSNGFLFIVDRLKELIKYKAYQVPPVELEHLLHSNPEIADAAVIPYPDEEAGQIPMAFVVRKPGSNITE---AE 444 (493)
Q Consensus 368 gD~~~~~~~g~~~~~GR~~d~i~~~G~~i~~~~ie~~l~~~~~v~~~~v~~~~~~~~~~~~~~~v~~~~~~~~~~---~~ 444 (493)
||++++|+||++++.||+||+||++|.+|+|.+||++|.+||+|.+++|++.+++..++.++++|++.++...+. ++
T Consensus 518 GD~~~~d~dG~l~i~GR~dd~I~~~G~ri~p~EIE~~l~~~p~V~eaaVvg~~d~~~ge~~~a~Vvl~~~~~~~~~l~~~ 597 (666)
T PLN02654 518 GDGCSRDKDGYYWLTGRVDDVINVSGHRIGTAEVESALVSHPQCAEAAVVGIEHEVKGQGIYAFVTLVEGVPYSEELRKS 597 (666)
T ss_pred CceEEECCCCcEEEeeeccCeEEeCCEEECHHHHHHHHHhCCCeeeEEEEeeEcCCCCeEEEEEEEECCCCCCCHHHHHH
Confidence 999999999999999999999999999999999999999999999999999999988999999999988755443 47
Q ss_pred HHHHHHhcCCCCCCcceEEEeccccCCCCCccchHHHHHHHhhC
Q 011116 445 IMDFIAKQVAPYKKIRRVAFINSIPKSTAGKILRRELVTHAISG 488 (493)
Q Consensus 445 l~~~l~~~l~~~~~p~~~~~~~~lP~t~~GK~~r~~l~~~~~~~ 488 (493)
|+++++++|+++++|+.|+++++||+|.+||++|+.||+.+..+
T Consensus 598 l~~~~~~~L~~~~~P~~i~~v~~lP~T~sGKi~r~~l~~~~~~~ 641 (666)
T PLN02654 598 LILTVRNQIGAFAAPDKIHWAPGLPKTRSGKIMRRILRKIASRQ 641 (666)
T ss_pred HHHHHHHhCCCCcCCCEEEECCCCCCCCCcCchHHHHHHHHcCC
Confidence 88999999999999999999999999999999999999998653
No 7
>PTZ00237 acetyl-CoA synthetase; Provisional
Probab=100.00 E-value=8.3e-68 Score=551.58 Aligned_cols=460 Identities=21% Similarity=0.293 Sum_probs=374.4
Q ss_pred hHHHHHHhhCCCCCCCEEEEECCCCCCcHHHHHHHHHHcCCeeccCCCCCCHHHHHHHHhhcCCeEEEEcCCCccc----
Q 011116 18 TLSHALSKRDSLCRKTTSLTSSPLPPSTSPVLYFSLLSLGVVISPANPLSSTSEVSHQIQLSKPSIAFATSHTSYK---- 93 (493)
Q Consensus 18 ~lA~~L~~~~gl~~gd~V~l~~~~~~~~~~~~~lA~~~~G~~~v~i~~~~~~~~l~~~l~~~~~~~il~~~~~~~~---- 93 (493)
++|++| .+.|+++||+|+++++ |++++++++|||+++|++++|+++.++.+++.+++++++++++|+++.....
T Consensus 104 ~lA~~L-~~~Gv~~GDrV~i~~~-n~~e~~~~~lA~~~~Gav~vpl~~~~~~~~l~~~l~~~~~~~li~~~~~~~~~~~~ 181 (647)
T PTZ00237 104 EFSRVL-LNLNISKNDNVLIYMA-NTLEPLIAMLSCARIGATHCVLFDGYSVKSLIDRIETITPKLIITTNYGILNDEII 181 (647)
T ss_pred HHHHHH-HHcCCCCCCEEEEECC-CCHHHHHHHHHHHHhCcEEEeeCCCCCHHHHHHHHHhcCCCEEEEcccceeCCcee
Confidence 359999 7889999999999999 9999999999999999999999999999999999999999999997632110
Q ss_pred -----CC------C--CCcEEEecC---------------------chhhhhhccCcc-cccccCCCCCCCCCCeEEEEc
Q 011116 94 -----LP------S--NLRTILMDS---------------------PEFISLLNQNED-VADFANSNMTVYQSDPAAILY 138 (493)
Q Consensus 94 -----~~------~--~~~~~~~~~---------------------~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~i~~ 138 (493)
+. . ...++.+.. ..|.+++..... ...........+++++++|+|
T Consensus 182 ~~~~~~~~~~~~~~~~~~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~Ily 261 (647)
T PTZ00237 182 TFTPNLKEAIELSTFKPSNVITLFRNDITSESDLKKIETIPTIPNTLSWYDEIKKIKENNQSPFYEYVPVESSHPLYILY 261 (647)
T ss_pred chHHHHHHHHhcccCCCCEEEEEEcCCcccccccccccccCCCcccccHHHHHhhhccccCCCCCCceeeCCCCcEEEEE
Confidence 00 0 012222210 112222221100 000011123456799999999
Q ss_pred cCCCCCCccceecchHHHHHHHHHh-hhhcccCCCCCCCCCCcEEEEecChhHHHHHHHHHHHHhcCCeEEEecC--CC-
Q 011116 139 SSGTTGKVKGVLLSHLNVIAIIAGY-YHVTEETDPNEGPPPHPVSFFTLPMFHVFGFFMLVRAASKGETLVFMER--FD- 214 (493)
Q Consensus 139 TSGTTG~pK~v~~t~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~pl~~~~g~~~~~~~l~~G~~~~~~~~--~~- 214 (493)
||||||.||+|+++|.+.+...... ...+ ....++++++..|++|+.+...++.++..|+++++.+. ..
T Consensus 262 TSGTTG~PKgV~~sh~~~l~~~~~~~~~~~-------~~~~~d~~~~~~~~~w~~~~~~~~~~l~~G~t~v~~~~~~~~p 334 (647)
T PTZ00237 262 TSGTTGNSKAVVRSNGPHLVGLKYYWRSII-------EKDIPTVVFSHSSIGWVSFHGFLYGSLSLGNTFVMFEGGIIKN 334 (647)
T ss_pred cCCCCCCCCeEEEcCcHHHHHHHHHHHHhc-------CCCCCcEEEEcCCCceEeeHHHHHHHHhCCcEEEEeCCCCCCC
Confidence 9999999999999999844333322 2222 23678999999999998777778899999999998754 12
Q ss_pred ---HHHHHHHHHhcCeeecccChHHHHHHHhcccC-----CCCCCCCeeEEEecCCCCCHHHHHHHHHhCCCCceecccc
Q 011116 215 ---FEKMLKAVENYRVTYMPVSPPLIVAFINSKLT-----DKYDLSSLQLLGCGGAPLGKEVTLKFKEKFPNVEIRQGYG 286 (493)
Q Consensus 215 ---~~~~~~~l~~~~~t~l~~~P~~~~~l~~~~~~-----~~~~l~~lr~v~~~Ge~~~~~~~~~~~~~~~~~~v~~~yG 286 (493)
+..+++.++++++|++.++|++++.|++.... ...+++++|.++++|+++++++.+++++.+ ++++++.||
T Consensus 335 ~~~~~~~~~~i~~~~vt~~~~~P~~~~~l~~~~~~~~~~~~~~~l~~Lr~i~~~G~~l~~~~~~~~~~~~-g~~i~~~yG 413 (647)
T PTZ00237 335 KHIEDDLWNTIEKHKVTHTLTLPKTIRYLIKTDPEATIIRSKYDLSNLKEIWCGGEVIEESIPEYIENKL-KIKSSRGYG 413 (647)
T ss_pred CCchHHHHHHHHHhCeEEEEeCHHHHHHHHhhCccccccccccCcchheEEEecCccCCHHHHHHHHHhc-CCCEEeeec
Confidence 68899999999999999999999999875321 234678999999999999999999999999 799999999
Q ss_pred ccccCCccccccCCCCCCCCCccccccCCceEEEEcCCCCccCCCCCceEEEEeCc---cccccccCCcccccccccC-C
Q 011116 287 LTETGGAGSRVIGPDEAERHGSVGRLAELMEAKIVDPATGEALPPGQKGELWLRGP---TIMKGYVGDDKATSETVHS-E 362 (493)
Q Consensus 287 ~tE~g~~~~~~~~~~~~~~~~~~g~p~~~~~~~i~d~~~~~~~~~g~~Gel~v~~~---~~~~gy~~~~~~~~~~~~~-~ 362 (493)
+||++...+... .......+++|+|.++++++|+| +++++++.|+.|||++++| .++.||+++++.+.+.|.. +
T Consensus 414 ~TE~~~~~~~~~-~~~~~~~~s~G~p~~g~~~~i~d-~~g~~~~~ge~GEl~v~~p~~p~~~~gy~~~~~~~~~~f~~~~ 491 (647)
T PTZ00237 414 QTEIGITYLYCY-GHINIPYNATGVPSIFIKPSILS-EDGKELNVNEIGEVAFKLPMPPSFATTFYKNDEKFKQLFSKFP 491 (647)
T ss_pred hHHhChhhhccC-CCCCCCCCCCccCcCCceEEEEC-CCCCCCCCCCceEEEEeccCCchhhCceeCCHHHHHHHHhCCC
Confidence 999986544322 12223347899999999999999 6899999999999999986 7889999999888877743 6
Q ss_pred CeeeccceEEEcCCCcEEEEcccCCeEEeCceeeChHHHHHHHhcCCCcceEEEEeeeCCCCCeeEEEEEEeCCC---CC
Q 011116 363 GWLKTGDLCYFDSNGFLFIVDRLKELIKYKAYQVPPVELEHLLHSNPEIADAAVIPYPDEEAGQIPMAFVVRKPG---SN 439 (493)
Q Consensus 363 ~~~~TgD~~~~~~~g~~~~~GR~~d~i~~~G~~i~~~~ie~~l~~~~~v~~~~v~~~~~~~~~~~~~~~v~~~~~---~~ 439 (493)
|||+|||+++++++|++++.||+||+||++|++|+|.+||++|.+||.|.+++|++.+++..++.++++|++.++ ..
T Consensus 492 g~~~TGDlg~~d~dG~l~i~GR~dd~i~~~G~rI~p~eIE~~l~~~p~V~eaavvg~~~~~~g~~~~a~Vv~~~~~~~~~ 571 (647)
T PTZ00237 492 GYYNSGDLGFKDENGYYTIVSRSDDQIKISGNKVQLNTIETSILKHPLVLECCSIGIYDPDCYNVPIGLLVLKQDQSNQS 571 (647)
T ss_pred CEEECCcEEEECCCCeEEEEeccCCEEEECCEEeCHHHHHHHHHhCCCceeeEEEeeEcCCCCCEEEEEEEeccCccccC
Confidence 899999999999999999999999999999999999999999999999999999999999889999999998743 22
Q ss_pred CCH----HHHHHHHHhcCCCCCCcceEEEeccccCCCCCccchHHHHHHHhhCC
Q 011116 440 ITE----AEIMDFIAKQVAPYKKIRRVAFINSIPKSTAGKILRRELVTHAISGN 489 (493)
Q Consensus 440 ~~~----~~l~~~l~~~l~~~~~p~~~~~~~~lP~t~~GK~~r~~l~~~~~~~~ 489 (493)
.+. ++|++.++++|+++++|+.|+++++||+|++||++|+.||+++...+
T Consensus 572 ~~~~~l~~~i~~~~~~~l~~~~~P~~i~~v~~lP~T~sGKi~R~~Lr~~~~~~~ 625 (647)
T PTZ00237 572 IDLNKLKNEINNIITQDIESLAVLRKIIIVNQLPKTKTGKIPRQIISKFLNDSN 625 (647)
T ss_pred CCHHHHHHHHHHHHHhhcCccccCcEEEEcCCCCCCCCccEeHHHHHHHHcCCC
Confidence 333 45677888899999999999999999999999999999999986544
No 8
>TIGR02316 propion_prpE propionate--CoA ligase. This family contains one of three readily separable clades of proteins in the group of acetate and propionate--CoA ligases. Characterized members of this family act on propionate. From propionyl-CoA, there is a cyclic degradation pathway: it is ligated by PrpC to the TCA cycle intermediate oxaloacetate, acted upon further by PrpD and an aconitase, then cleaved by PrpB to pyruvate and the TCA cycle intermediate succinate.
Probab=100.00 E-value=3.4e-67 Score=547.38 Aligned_cols=460 Identities=24% Similarity=0.310 Sum_probs=379.4
Q ss_pred hHHHHHHhhCCCCCCCEEEEECCCCCCcHHHHHHHHHHcCCeeccCCCCCCHHHHHHHHhhcCCeEEEEcCCCccc----
Q 011116 18 TLSHALSKRDSLCRKTTSLTSSPLPPSTSPVLYFSLLSLGVVISPANPLSSTSEVSHQIQLSKPSIAFATSHTSYK---- 93 (493)
Q Consensus 18 ~lA~~L~~~~gl~~gd~V~l~~~~~~~~~~~~~lA~~~~G~~~v~i~~~~~~~~l~~~l~~~~~~~il~~~~~~~~---- 93 (493)
++|++| .+.|+++||+|+++++ |+++++++++||+++|++++|+++.++.+++.+++++++++++|+++.....
T Consensus 95 ~lA~~L-~~~Gv~~Gd~V~i~~~-n~~e~v~~~lA~~~~Gav~vpl~~~~~~~~l~~~l~~~~~~~li~~~~~~~~~~~~ 172 (628)
T TIGR02316 95 VFASAL-RALGVGRGDRVLIYMP-MIAEAVFAMLACARIGAIHSVVFGGFASHSLALRIDDATPKLIVSADAGMRGGKVI 172 (628)
T ss_pred HHHHHH-HHcCCCCCCEEEEEcC-CCHHHHHHHHHHHHhCCEEEecCCCCCHHHHHHHHHhcCceEEEECCccccCCccc
Confidence 349999 7889999999999999 9999999999999999999999999999999999999999999998653210
Q ss_pred ------------C-CCCCcEEEecCc------------hhhhhhccCcccccccCCCCCCCCCCeEEEEccCCCCCCccc
Q 011116 94 ------------L-PSNLRTILMDSP------------EFISLLNQNEDVADFANSNMTVYQSDPAAILYSSGTTGKVKG 148 (493)
Q Consensus 94 ------------~-~~~~~~~~~~~~------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~TSGTTG~pK~ 148 (493)
. .....++.++.. .|.++..... ..........++++++|+|||||||.|||
T Consensus 173 ~~~~~~~~~~~~~~~~~~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~a~ilyTSGTTG~PKg 249 (628)
T TIGR02316 173 PYKPLLDAAIAEAQHPPPHVLLVDRGLAPMRLIPGRDVDYAALRTQHE---DAQVPVEWLESNEPSYILYTSGTTGKPKG 249 (628)
T ss_pred ccHHHHHHHHHhcCCCCCEEEEEeCCCCCcCcccCccccHHHHhhccc---cCCCCceecCCCCcEEEEECCCCCCCCce
Confidence 0 011223333321 1222222110 00111223467899999999999999999
Q ss_pred eecchHHHHHHHHH-hhhhcccCCCCCCCCCCcEEEEecChhHHHHH-HHHHHHHhcCCeEEEecC----CCHHHHHHHH
Q 011116 149 VLLSHLNVIAIIAG-YYHVTEETDPNEGPPPHPVSFFTLPMFHVFGF-FMLVRAASKGETLVFMER----FDFEKMLKAV 222 (493)
Q Consensus 149 v~~t~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~pl~~~~g~-~~~~~~l~~G~~~~~~~~----~~~~~~~~~l 222 (493)
|.++|.++..+... ....+ ++.++|++++..|++|+.++ ..++.++..|+++++.+. .++..+++.+
T Consensus 250 V~~sh~~~~~~~~~~~~~~~-------~~~~~d~~~~~~~~~~~~g~~~~~~~~L~~G~~~v~~~~~~~~~~~~~~~~~i 322 (628)
T TIGR02316 250 VQRDVGGYAVALALSMWAIF-------GIRAGQVMFSASDVGWVVGHSYIVYAPLLAGAATVLYEGLPTNPDPGVWWSIV 322 (628)
T ss_pred EEECCcHHHHHHHHHHHHhc-------CCCCCcEEEEcCCCCeeehhhHHHHHHHhccceEEEeCCCCCCCCHHHHHHHH
Confidence 99999998654433 33333 35788999999999999987 678899999999999853 4689999999
Q ss_pred HhcCeeecccChHHHHHHHhccc--CCCCCCCCeeEEEecCCCCCHHHHHHHHHhCCCCceeccccccccCCccccccCC
Q 011116 223 ENYRVTYMPVSPPLIVAFINSKL--TDKYDLSSLQLLGCGGAPLGKEVTLKFKEKFPNVEIRQGYGLTETGGAGSRVIGP 300 (493)
Q Consensus 223 ~~~~~t~l~~~P~~~~~l~~~~~--~~~~~l~~lr~v~~~Ge~~~~~~~~~~~~~~~~~~v~~~yG~tE~g~~~~~~~~~ 300 (493)
+++++|+++++|++++.|.+... ....+++++|.+++|||++++++.+++.+.+ +..+++.||+||++..++.....
T Consensus 323 ~~~~vt~~~~~P~~~~~l~~~~~~~~~~~~l~~lr~~~~gGe~l~~~~~~~~~~~~-~~~~~~~yG~TE~~~~~~~~~~~ 401 (628)
T TIGR02316 323 ERYGVRTMFSAPTAIRVLKKQDAAWLRKHDLSSLHWLFLAGEPLDEPTAHWITDGL-GKPVIDNYWQTETGWPVLAIMPG 401 (628)
T ss_pred HHhCCeEEEeCHHHHHHHHhcCCcccccCCccceeEEEEecCCCCHHHHHHHHHHh-CCCEEecccccccCceeecCCCC
Confidence 99999999999999998877543 2345688999999999999999999999988 78899999999998544332111
Q ss_pred -C-CCCCCCccccccCCceEEEEcCCCCccCCCCCceEEEEeCc---cccccccCCcccccccc---cCCCeeeccceEE
Q 011116 301 -D-EAERHGSVGRLAELMEAKIVDPATGEALPPGQKGELWLRGP---TIMKGYVGDDKATSETV---HSEGWLKTGDLCY 372 (493)
Q Consensus 301 -~-~~~~~~~~g~p~~~~~~~i~d~~~~~~~~~g~~Gel~v~~~---~~~~gy~~~~~~~~~~~---~~~~~~~TgD~~~ 372 (493)
. .....+++|+|+++++++|+|++++++++.|+.|||+++|| ..+.+|+++++.+.+.+ ..++||+|||+|+
T Consensus 402 ~~~~~~~~gs~G~p~~g~~v~i~d~~~g~~~~~g~~Gel~v~gp~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~TGD~g~ 481 (628)
T TIGR02316 402 LDLKPVKLGSPGLPMYGYHLRVLDEATGRPCGPNEKGVLTVVPPLPPGCLSTVWGDDARFLKTYWSHFKRPLYSSFDWGI 481 (628)
T ss_pred CCcCCCCCCCcccCcCCceEEEEECCCCCCCCCCCcEEEEEecCCCccccccccCChHHHHHhhhhcCCCCEEECCceEE
Confidence 1 12345788999999999999976899999999999999998 46788999887766554 2467999999999
Q ss_pred EcCCCcEEEEcccCCeEEeCceeeChHHHHHHHhcCCCcceEEEEeeeCCCCCeeEEEEEEeCCCCCC--------CHHH
Q 011116 373 FDSNGFLFIVDRLKELIKYKAYQVPPVELEHLLHSNPEIADAAVIPYPDEEAGQIPMAFVVRKPGSNI--------TEAE 444 (493)
Q Consensus 373 ~~~~g~~~~~GR~~d~i~~~G~~i~~~~ie~~l~~~~~v~~~~v~~~~~~~~~~~~~~~v~~~~~~~~--------~~~~ 444 (493)
+|+||+++++||+||+||++|.+|+|.+||++|.++|+|.+++|++++++..++.++++|++.++... ..++
T Consensus 482 ~d~dG~l~i~GR~dd~ik~~G~rv~~~eIE~~l~~~p~V~ea~Vvg~~d~~~g~~~~~~vv~~~~~~~~~~~~~~~~~~~ 561 (628)
T TIGR02316 482 RDEDGYTFILGRTDDVINVAGHRLGTREIEESVSSHPSVAEVAVVGVHDELKGQVAVVFAILKESDSAGDAHDPHAVETG 561 (628)
T ss_pred EcCCCcEEEEEcCcceEEeCCEEeCHHHHHHHHHhCCCcceEEEEeeecCCCCeEEEEEEEEcCCcccccccchHHHHHH
Confidence 99999999999999999999999999999999999999999999999999889999999998765332 2467
Q ss_pred HHHHHHhcCCCCCCcceEEEeccccCCCCCccchHHHHHHHhhCCC
Q 011116 445 IMDFIAKQVAPYKKIRRVAFINSIPKSTAGKILRRELVTHAISGNL 490 (493)
Q Consensus 445 l~~~l~~~l~~~~~p~~~~~~~~lP~t~~GK~~r~~l~~~~~~~~~ 490 (493)
|+++++++|+++++|+.|+++++||+|++||++|+.|++.+...+.
T Consensus 562 i~~~~~~~L~~~~~P~~v~~v~~lP~t~sGKi~r~~L~~~~~~~~~ 607 (628)
T TIGR02316 562 MMDCVVRQLGAVARPARVYFVAALPKTRSGKLLRRSIQALAEGRDP 607 (628)
T ss_pred HHHHHHHhcCCCcCCCEEEEcCCCCCCCchHHHHHHHHHHHcCCCC
Confidence 9999999999999999999999999999999999999999876543
No 9
>TIGR02188 Ac_CoA_lig_AcsA acetate--CoA ligase. This model describes acetate-CoA ligase (EC 6.2.1.1), also called acetyl-CoA synthetase and acetyl-activating enzyme. It catalyzes the reaction ATP + acetate + CoA = AMP + diphosphate + acetyl-CoA and belongs to the family of AMP-binding enzymes described by Pfam model pfam00501.
Probab=100.00 E-value=1.3e-66 Score=543.76 Aligned_cols=458 Identities=24% Similarity=0.335 Sum_probs=382.8
Q ss_pred hHHHHHHhhCCCCCCCEEEEECCCCCCcHHHHHHHHHHcCCeeccCCCCCCHHHHHHHHhhcCCeEEEEcCCCccc----
Q 011116 18 TLSHALSKRDSLCRKTTSLTSSPLPPSTSPVLYFSLLSLGVVISPANPLSSTSEVSHQIQLSKPSIAFATSHTSYK---- 93 (493)
Q Consensus 18 ~lA~~L~~~~gl~~gd~V~l~~~~~~~~~~~~~lA~~~~G~~~v~i~~~~~~~~l~~~l~~~~~~~il~~~~~~~~---- 93 (493)
++|++| .+.|+++||+|+++++ |+++++++++||+++|++++|+++.++.+++.+++++++++++|+++.....
T Consensus 100 ~lA~~L-~~~Gv~~gd~V~i~~~-n~~e~~~~~lA~~~~Gav~v~i~~~~~~~~l~~~l~~~~~~~li~~~~~~~~~~~~ 177 (625)
T TIGR02188 100 RFANVL-KSLGVKKGDRVAIYMP-MIPEAAIAMLACARIGAIHSVVFGGFSAEALADRINDAGAKLVITADEGLRGGKVI 177 (625)
T ss_pred HHHHHH-HHcCCCCCCEEEEECC-CCHHHHHHHHHHHHhCCEEeccCCCCCHHHHHHHHHhcCCCEEEEcCccccCCccc
Confidence 359999 7899999999999999 9999999999999999999999999999999999999999999998754321
Q ss_pred ------------CCCCCc-EEEecC------------chhhhhhccCcccccccCCCCCCCCCCeEEEEccCCCCCCccc
Q 011116 94 ------------LPSNLR-TILMDS------------PEFISLLNQNEDVADFANSNMTVYQSDPAAILYSSGTTGKVKG 148 (493)
Q Consensus 94 ------------~~~~~~-~~~~~~------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~TSGTTG~pK~ 148 (493)
.+.... ++.++. ..|.++.... ..........++++++|+|||||||.||+
T Consensus 178 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~a~il~TSGTTG~PKg 253 (625)
T TIGR02188 178 PLKAIVDEALEKCPVSVEHVLVVRRTGNPVPWVEGRDVWWHDLMAKA----SAYCEPEPMDSEDPLFILYTSGSTGKPKG 253 (625)
T ss_pred chHHHHHHHHHhCCCCccEEEEEcCCCCCcCccccccccHHHHHhhc----CCCCCceecCCCCceEEEecCCCCCCCCe
Confidence 000111 222221 1122222221 11122334567899999999999999999
Q ss_pred eecchHHHHHHHHHhhhhcccCCCCCCCCCCcEEEEecChhHHHHH-HHHHHHHhcCCeEEEecC----CCHHHHHHHHH
Q 011116 149 VLLSHLNVIAIIAGYYHVTEETDPNEGPPPHPVSFFTLPMFHVFGF-FMLVRAASKGETLVFMER----FDFEKMLKAVE 223 (493)
Q Consensus 149 v~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pl~~~~g~-~~~~~~l~~G~~~~~~~~----~~~~~~~~~l~ 223 (493)
|+++|.++..+........ .++.++|++++..|++|+.+. +.++.++..|+++++.+. .++..+++.++
T Consensus 254 V~~s~~~~~~~~~~~~~~~------~~~~~~d~~~~~~~~~~~~g~~~~~~~~l~~G~t~vl~~~~~~~~~~~~~~~~i~ 327 (625)
T TIGR02188 254 VLHTTGGYLLYAAMTMKYV------FDIKDGDIFWCTADVGWITGHSYIVYGPLANGATTVMFEGTPTYPDPGRFWEIIE 327 (625)
T ss_pred EEECccHhHHHHHHHHHhc------cCCCCCcEEEECCCchhhhccHHHHHHHHHcCCeEEEECCCCCCCChhHHHHHHH
Confidence 9999999876554433322 145788999999999999887 678899999999998753 37899999999
Q ss_pred hcCeeecccChHHHHHHHhcccC--CCCCCCCeeEEEecCCCCCHHHHHHHHHhCC--CCceeccccccccCCccccccC
Q 011116 224 NYRVTYMPVSPPLIVAFINSKLT--DKYDLSSLQLLGCGGAPLGKEVTLKFKEKFP--NVEIRQGYGLTETGGAGSRVIG 299 (493)
Q Consensus 224 ~~~~t~l~~~P~~~~~l~~~~~~--~~~~l~~lr~v~~~Ge~~~~~~~~~~~~~~~--~~~v~~~yG~tE~g~~~~~~~~ 299 (493)
++++|++.++|++++.|.+.... ...+++++|.++++|+++++++.+++.+.++ ++++++.||+||+|..++....
T Consensus 328 ~~~vt~~~~~P~~~~~l~~~~~~~~~~~~l~~lr~i~~~G~~l~~~~~~~~~~~~~~~~~~i~~~yG~TE~~~~~~~~~~ 407 (625)
T TIGR02188 328 KHKVTIFYTAPTAIRALMRLGDEWVKKHDLSSLRLLGSVGEPINPEAWMWYYKVVGKERCPIVDTWWQTETGGIMITPLP 407 (625)
T ss_pred HhCCeEEEeCHHHHHHHHhcCCcccccCCccceeEEEEecCCCCHHHHHHHHHHcCCCCCceEecccccccCCceeecCC
Confidence 99999999999999999876532 2345789999999999999999999999884 3789999999999876543222
Q ss_pred CCCCCCCCccccccCCceEEEEcCCCCccCC-CCCceEEEEeC--ccccccccCCccccccccc--CCCeeeccceEEEc
Q 011116 300 PDEAERHGSVGRLAELMEAKIVDPATGEALP-PGQKGELWLRG--PTIMKGYVGDDKATSETVH--SEGWLKTGDLCYFD 374 (493)
Q Consensus 300 ~~~~~~~~~~g~p~~~~~~~i~d~~~~~~~~-~g~~Gel~v~~--~~~~~gy~~~~~~~~~~~~--~~~~~~TgD~~~~~ 374 (493)
.......+++|+|.++++++|+| +++++++ +|+.|||++++ |.+++||+++++.+.+.+. .+|||+|||+++++
T Consensus 408 ~~~~~~~~~~G~p~~g~~~~i~d-~~g~~~~~~g~~GeL~v~~p~p~~~~gy~~~~~~~~~~~~~~~~g~~~TGDl~~~d 486 (625)
T TIGR02188 408 GATPTKPGSATLPFFGIEPAVVD-EEGNPVEGPGEGGYLVIKQPWPGMLRTIYGDHERFVDTYFSPFPGYYFTGDGARRD 486 (625)
T ss_pred CCCCcCCCcccCCcCCceEEEEC-CCCCCCCCCCCeEEEEEccCCCcccccccCChHHHHHHHhccCCCEEECCceEEEc
Confidence 11223567899999999999999 7889998 89999999999 6899999999987776653 36899999999999
Q ss_pred CCCcEEEEcccCCeEEeCceeeChHHHHHHHhcCCCcceEEEEeeeCCCCCeeEEEEEEeCCCCCCC---HHHHHHHHHh
Q 011116 375 SNGFLFIVDRLKELIKYKAYQVPPVELEHLLHSNPEIADAAVIPYPDEEAGQIPMAFVVRKPGSNIT---EAEIMDFIAK 451 (493)
Q Consensus 375 ~~g~~~~~GR~~d~i~~~G~~i~~~~ie~~l~~~~~v~~~~v~~~~~~~~~~~~~~~v~~~~~~~~~---~~~l~~~l~~ 451 (493)
+||++++.||+||+||++|++|+|.+||++|.++|+|.+++|++.+++..++.+++++++.++...+ .+++++++++
T Consensus 487 ~dG~l~i~GR~dd~i~~~G~ri~p~eIE~~l~~~p~V~e~~vvg~~~~~~g~~~~a~vv~~~~~~~~~~~~~~l~~~~~~ 566 (625)
T TIGR02188 487 KDGYIWITGRVDDVINVSGHRLGTAEIESALVSHPAVAEAAVVGIPDDIKGQAIYAFVTLKDGYEPDDELRKELRKHVRK 566 (625)
T ss_pred CCCcEEEEecccCEEEeCCEEECHHHHHHHHHhCCCcceEEEEeeEcCCCCeEEEEEEEeCCCCCCCHHHHHHHHHHHHh
Confidence 9999999999999999999999999999999999999999999999998899999999998775544 3689999999
Q ss_pred cCCCCCCcceEEEeccccCCCCCccchHHHHHHHhhC
Q 011116 452 QVAPYKKIRRVAFINSIPKSTAGKILRRELVTHAISG 488 (493)
Q Consensus 452 ~l~~~~~p~~~~~~~~lP~t~~GK~~r~~l~~~~~~~ 488 (493)
+|+++++|+.|+++++||+|++||++|+.|++.+...
T Consensus 567 ~l~~~~~P~~i~~v~~lP~t~sGKi~r~~l~~~~~~~ 603 (625)
T TIGR02188 567 EIGPIAKPDKIRFVPGLPKTRSGKIMRRLLRKIAAGE 603 (625)
T ss_pred hcCCCccCcEEEECCCCCCCCCccchHHHHHHHHcCC
Confidence 9999999999999999999999999999999997654
No 10
>PRK07788 acyl-CoA synthetase; Validated
Probab=100.00 E-value=5.7e-67 Score=538.98 Aligned_cols=444 Identities=27% Similarity=0.392 Sum_probs=382.1
Q ss_pred HHHHHHhhCCCCCCCEEEEECCCCCCcHHHHHHHHHHcCCeeccCCCCCCHHHHHHHHhhcCCeEEEEcCCCcccCCC--
Q 011116 19 LSHALSKRDSLCRKTTSLTSSPLPPSTSPVLYFSLLSLGVVISPANPLSSTSEVSHQIQLSKPSIAFATSHTSYKLPS-- 96 (493)
Q Consensus 19 lA~~L~~~~gl~~gd~V~l~~~~~~~~~~~~~lA~~~~G~~~v~i~~~~~~~~l~~~l~~~~~~~il~~~~~~~~~~~-- 96 (493)
+|++| .+.|+++||+|+++++ |+++++++++||+++|++++|+++.++.+++.++++++++++++++++....+.+
T Consensus 87 la~~L-~~~gi~~gd~V~i~~~-n~~~~~~~~la~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~~~~ 164 (549)
T PRK07788 87 LARGL-LALGVRAGDGVAVLAR-NHRGFVLALYAAGKVGARIILLNTGFSGPQLAEVAAREGVKALVYDDEFTDLLSALP 164 (549)
T ss_pred HHHHH-HHcCCCCCCEEEEEcC-CCHHHHHHHHHHHhcCCEEEEeCCCCCHHHHHHHHHhcCCcEEEECchhHHHHHhhc
Confidence 49999 7789999999999999 9999999999999999999999999999999999999999999999765554321
Q ss_pred ----CCcEEEecC----------chhhhhhccCcccccccCCCCCCCCCCeEEEEccCCCCCCccceecchHHHHHHHHH
Q 011116 97 ----NLRTILMDS----------PEFISLLNQNEDVADFANSNMTVYQSDPAAILYSSGTTGKVKGVLLSHLNVIAIIAG 162 (493)
Q Consensus 97 ----~~~~~~~~~----------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~TSGTTG~pK~v~~t~~~~~~~~~~ 162 (493)
....+.... ..+.++..... ....+...+++++++|||||||.||+|.++|.++...+..
T Consensus 165 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~i~~TSGTTG~PKgv~~s~~~~~~~~~~ 238 (549)
T PRK07788 165 PDLGRLRAWGGNPDDDEPSGSTDETLDDLIAGSS------TAPLPKPPKPGGIVILTSGTTGTPKGAPRPEPSPLAPLAG 238 (549)
T ss_pred cccccceEEEEecCccccCCcCcccHHHHhcCCC------CCCCCCCCCCCcEEEECCCCCCCCCEEeccCccHHHHHHH
Confidence 112221110 12333332211 1112234567899999999999999999999999888777
Q ss_pred hhhhcccCCCCCCCCCCcEEEEecChhHHHHHHHHHHHHhcCCeEEEecCCCHHHHHHHHHhcCeeecccChHHHHHHHh
Q 011116 163 YYHVTEETDPNEGPPPHPVSFFTLPMFHVFGFFMLVRAASKGETLVFMERFDFEKMLKAVENYRVTYMPVSPPLIVAFIN 242 (493)
Q Consensus 163 ~~~~~~~~~~~~~~~~~~~~~~~~pl~~~~g~~~~~~~l~~G~~~~~~~~~~~~~~~~~l~~~~~t~l~~~P~~~~~l~~ 242 (493)
....+. +.++++++...|++|..++..++.++..|+++++...+++..+++.++++++|++.++|+++..+++
T Consensus 239 ~~~~~~-------~~~~d~~~~~~p~~~~~g~~~~~~~l~~G~~~v~~~~~~~~~~~~~i~~~~vt~~~~~P~~~~~l~~ 311 (549)
T PRK07788 239 LLSRVP-------FRAGETTLLPAPMFHATGWAHLTLAMALGSTVVLRRRFDPEATLEDIAKHKATALVVVPVMLSRILD 311 (549)
T ss_pred HHhhCC-------CCcCCeEEEccchHHHHHHHHHHHHHHhCCEEEECCCCCHHHHHHHHHHhCCcEEEEHHHHHHHHHh
Confidence 666553 4788999999999999999878889999999999888899999999999999999999999999988
Q ss_pred cccC--CCCCCCCeeEEEecCCCCCHHHHHHHHHhCCCCceeccccccccCCccccccCCCCCCCCCccccccCCceEEE
Q 011116 243 SKLT--DKYDLSSLQLLGCGGAPLGKEVTLKFKEKFPNVEIRQGYGLTETGGAGSRVIGPDEAERHGSVGRLAELMEAKI 320 (493)
Q Consensus 243 ~~~~--~~~~l~~lr~v~~~Ge~~~~~~~~~~~~~~~~~~v~~~yG~tE~g~~~~~~~~~~~~~~~~~~g~p~~~~~~~i 320 (493)
.... ....++++|.+++||+++++++.+++.+.| +..+++.||+||++...... ........+++|+|.+++++++
T Consensus 312 ~~~~~~~~~~~~~lr~i~~gG~~l~~~~~~~~~~~~-~~~l~~~YG~TE~~~~~~~~-~~~~~~~~~~vG~~~~~~~~~i 389 (549)
T PRK07788 312 LGPEVLAKYDTSSLKIIFVSGSALSPELATRALEAF-GPVLYNLYGSTEVAFATIAT-PEDLAEAPGTVGRPPKGVTVKI 389 (549)
T ss_pred CcccccCCCCCCceeEEEEeCCCCCHHHHHHHHHHh-CccceeccCcchhchhhccC-hhhhhhcCCCcccCCCCcEEEE
Confidence 7654 455678999999999999999999999999 78899999999998654431 1112234578999999999999
Q ss_pred EcCCCCccCCCCCceEEEEeCccccccccCCcccccccccCCCeeeccceEEEcCCCcEEEEcccCCeEEeCceeeChHH
Q 011116 321 VDPATGEALPPGQKGELWLRGPTIMKGYVGDDKATSETVHSEGWLKTGDLCYFDSNGFLFIVDRLKELIKYKAYQVPPVE 400 (493)
Q Consensus 321 ~d~~~~~~~~~g~~Gel~v~~~~~~~gy~~~~~~~~~~~~~~~~~~TgD~~~~~~~g~~~~~GR~~d~i~~~G~~i~~~~ 400 (493)
+| +++++++.|+.|||+++|+.++.||++++.. . . .+|||+|||+++++++|.+++.||.||+||.+|++|+|.+
T Consensus 390 ~d-~~~~~~~~g~~Gel~v~g~~~~~gY~~~~~~--~-~-~~g~~~TGDl~~~~~~g~l~~~GR~dd~i~~~G~~v~p~e 464 (549)
T PRK07788 390 LD-ENGNEVPRGVVGRIFVGNGFPFEGYTDGRDK--Q-I-IDGLLSSGDVGYFDEDGLLFVDGRDDDMIVSGGENVFPAE 464 (549)
T ss_pred EC-CCcCCCCCCCeEEEEEeCCCccccccCCCcc--c-c-cCCceecCceEEEcCCCCEEEeccCcceEEECCEEECHHH
Confidence 99 6788999999999999999999999988765 1 1 3789999999999999999999999999999999999999
Q ss_pred HHHHHhcCCCcceEEEEeeeCCCCCeeEEEEEEeCCCCCCCHHHHHHHHHhcCCCCCCcceEEEeccccCCCCCccchHH
Q 011116 401 LEHLLHSNPEIADAAVIPYPDEEAGQIPMAFVVRKPGSNITEAEIMDFIAKQVAPYKKIRRVAFINSIPKSTAGKILRRE 480 (493)
Q Consensus 401 ie~~l~~~~~v~~~~v~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~l~~~l~~~~~p~~~~~~~~lP~t~~GK~~r~~ 480 (493)
||++|.++|+|.+++|++..++..++.+++++++.++...+.++++++++++|+++++|..+++++++|+|++||++|+.
T Consensus 465 IE~~l~~~~~V~~~~v~~~~~~~~g~~~~a~vv~~~~~~~~~~~l~~~~~~~l~~~~~P~~i~~v~~lP~t~~GKi~r~~ 544 (549)
T PRK07788 465 VEDLLAGHPDVVEAAVIGVDDEEFGQRLRAFVVKAPGAALDEDAIKDYVRDNLARYKVPRDVVFLDELPRNPTGKVLKRE 544 (549)
T ss_pred HHHHHHhCCCeeEEEEECCcCcccccEEEEEEEeCCCCCCCHHHHHHHHHHhhhcCCCCcEEEEeCCCCCCCCcCEeHHH
Confidence 99999999999999999999988899999999998877788899999999999999999999999999999999999999
Q ss_pred HHHH
Q 011116 481 LVTH 484 (493)
Q Consensus 481 l~~~ 484 (493)
|+++
T Consensus 545 L~~~ 548 (549)
T PRK07788 545 LREM 548 (549)
T ss_pred hhcc
Confidence 9753
No 11
>PRK00174 acetyl-CoA synthetase; Provisional
Probab=100.00 E-value=7.3e-66 Score=538.92 Aligned_cols=458 Identities=25% Similarity=0.325 Sum_probs=381.0
Q ss_pred hHHHHHHhhCCCCCCCEEEEECCCCCCcHHHHHHHHHHcCCeeccCCCCCCHHHHHHHHhhcCCeEEEEcCCCcccC---
Q 011116 18 TLSHALSKRDSLCRKTTSLTSSPLPPSTSPVLYFSLLSLGVVISPANPLSSTSEVSHQIQLSKPSIAFATSHTSYKL--- 94 (493)
Q Consensus 18 ~lA~~L~~~~gl~~gd~V~l~~~~~~~~~~~~~lA~~~~G~~~v~i~~~~~~~~l~~~l~~~~~~~il~~~~~~~~~--- 94 (493)
++|++| .+.|+++||+|+++++ |+++++++++||+++|++++|+++.++.+++.++++.++++++|+++......
T Consensus 110 ~lA~~L-~~~Gv~~gd~V~i~~~-n~~e~~~~~lA~~~~Gav~v~l~~~~~~~~l~~~l~~~~~~~li~~~~~~~~~~~~ 187 (637)
T PRK00174 110 RFANAL-KSLGVKKGDRVAIYMP-MIPEAAVAMLACARIGAVHSVVFGGFSAEALADRIIDAGAKLVITADEGVRGGKPI 187 (637)
T ss_pred HHHHHH-HHcCCCCCCEEEEEcC-CCHHHHHHHHHHHHcCCEEEecCCCCCHHHHHHHHHhcCCcEEEEcCccccCCccc
Confidence 359999 7899999999999999 99999999999999999999999999999999999999999999987543210
Q ss_pred ------C------CCCc-EEEecC------------chhhhhhccCcccccccCCCCCCCCCCeEEEEccCCCCCCccce
Q 011116 95 ------P------SNLR-TILMDS------------PEFISLLNQNEDVADFANSNMTVYQSDPAAILYSSGTTGKVKGV 149 (493)
Q Consensus 95 ------~------~~~~-~~~~~~------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~TSGTTG~pK~v 149 (493)
. .... ++.++. ..|.++.... ...........+++++|+|||||||.||+|
T Consensus 188 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~d~a~i~~TSGTTG~PKgV 263 (637)
T PRK00174 188 PLKANVDEALANCPSVEKVIVVRRTGGDVDWVEGRDLWWHELVAGA----SDECEPEPMDAEDPLFILYTSGSTGKPKGV 263 (637)
T ss_pred chHHHHHHHHHhCCCccEEEEEcCCCCCcCcCCCCcccHHHHHhhc----CCCCCccccCCCCcEEEEECCCCCCCCceE
Confidence 0 0111 222221 1122222211 111222345678999999999999999999
Q ss_pred ecchHHHHHHHHHhhhhcccCCCCCCCCCCcEEEEecChhHHHHH-HHHHHHHhcCCeEEEecC----CCHHHHHHHHHh
Q 011116 150 LLSHLNVIAIIAGYYHVTEETDPNEGPPPHPVSFFTLPMFHVFGF-FMLVRAASKGETLVFMER----FDFEKMLKAVEN 224 (493)
Q Consensus 150 ~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pl~~~~g~-~~~~~~l~~G~~~~~~~~----~~~~~~~~~l~~ 224 (493)
.++|.++..+........ .++.++|++++..|++|..+. +.++.++..|+++++.+. .++..+++.+++
T Consensus 264 ~~s~~~~~~~~~~~~~~~------~~~~~~d~~~~~~~~~~~~~~~~~~~~~l~~G~~~v~~~~~~~~~~~~~~~~~i~~ 337 (637)
T PRK00174 264 LHTTGGYLVYAAMTMKYV------FDYKDGDVYWCTADVGWVTGHSYIVYGPLANGATTLMFEGVPNYPDPGRFWEVIDK 337 (637)
T ss_pred EeCcchhHHHHHHHHHhc------cCCCCCcEEEEcCCchHhhhhHHHHHHHHHcCCEEEEECCCCCCCChHHHHHHHHh
Confidence 999999876544332221 134788999999999999987 578899999999998753 478999999999
Q ss_pred cCeeecccChHHHHHHHhcccC--CCCCCCCeeEEEecCCCCCHHHHHHHHHhCC--CCceeccccccccCCccccccCC
Q 011116 225 YRVTYMPVSPPLIVAFINSKLT--DKYDLSSLQLLGCGGAPLGKEVTLKFKEKFP--NVEIRQGYGLTETGGAGSRVIGP 300 (493)
Q Consensus 225 ~~~t~l~~~P~~~~~l~~~~~~--~~~~l~~lr~v~~~Ge~~~~~~~~~~~~~~~--~~~v~~~yG~tE~g~~~~~~~~~ 300 (493)
+++|++.++|++++.|++.... ...+++++|.++++||++++++.+++.+.++ ++++++.||+||++.........
T Consensus 338 ~~vt~~~~~P~~~~~l~~~~~~~~~~~~~~~lr~i~~~Ge~l~~~~~~~~~~~~~~~~~~i~~~YG~TE~~~~~~~~~~~ 417 (637)
T PRK00174 338 HKVTIFYTAPTAIRALMKEGDEHPKKYDLSSLRLLGSVGEPINPEAWEWYYKVVGGERCPIVDTWWQTETGGIMITPLPG 417 (637)
T ss_pred cCCeEEeecHHHHHHHHhcCCcccccCCccceeEEEEeCCCCCHHHHHHHHHHhCCCCCceEecccccccCCceEecCCC
Confidence 9999999999999999886532 2345789999999999999999999999884 37899999999998765432111
Q ss_pred CCCCCCCccccccCCceEEEEcCCCCccCCCCCceEEEEeC--ccccccccCCccccccccc--CCCeeeccceEEEcCC
Q 011116 301 DEAERHGSVGRLAELMEAKIVDPATGEALPPGQKGELWLRG--PTIMKGYVGDDKATSETVH--SEGWLKTGDLCYFDSN 376 (493)
Q Consensus 301 ~~~~~~~~~g~p~~~~~~~i~d~~~~~~~~~g~~Gel~v~~--~~~~~gy~~~~~~~~~~~~--~~~~~~TgD~~~~~~~ 376 (493)
......+++|+|+++++++|+| +++++++.|+.|||+++| |.+++||+++++.+.+.+. .+|||+|||++++++|
T Consensus 418 ~~~~~~~~vG~p~~g~~~~i~d-~~g~~~~~g~~Gel~v~g~~p~~~~gy~~~~~~~~~~~~~~~~g~~~TGDl~~~d~d 496 (637)
T PRK00174 418 ATPLKPGSATRPLPGIQPAVVD-EEGNPLEGGEGGNLVIKDPWPGMMRTIYGDHERFVKTYFSTFKGMYFTGDGARRDED 496 (637)
T ss_pred CCCcCCCcccCCCCCceEEEEC-CCCCCCCCCCcEEEEEcCCCCcccccccCCHHHHHHhhhcCCCCEEECCceEEEcCC
Confidence 1123457899999999999999 778999999999999999 6899999999987776652 3689999999999999
Q ss_pred CcEEEEcccCCeEEeCceeeChHHHHHHHhcCCCcceEEEEeeeCCCCCeeEEEEEEeCCCCCCC---HHHHHHHHHhcC
Q 011116 377 GFLFIVDRLKELIKYKAYQVPPVELEHLLHSNPEIADAAVIPYPDEEAGQIPMAFVVRKPGSNIT---EAEIMDFIAKQV 453 (493)
Q Consensus 377 g~~~~~GR~~d~i~~~G~~i~~~~ie~~l~~~~~v~~~~v~~~~~~~~~~~~~~~v~~~~~~~~~---~~~l~~~l~~~l 453 (493)
|++++.||.||+||++|++|+|.+||++|.++|+|.+++|++.+++..++.+++++++.++...+ .++|+++++++|
T Consensus 497 G~l~~~GR~dd~ik~~G~~v~p~eIE~~l~~~~~V~~~~Vvg~~~~~~g~~~~a~vv~~~~~~~~~~~~~~l~~~l~~~l 576 (637)
T PRK00174 497 GYYWITGRVDDVLNVSGHRLGTAEIESALVAHPKVAEAAVVGRPDDIKGQGIYAFVTLKGGEEPSDELRKELRNWVRKEI 576 (637)
T ss_pred CcEEEEEecccEEEeCCEEECHHHHHHHHHhCCCcceEEEEeeEcCCCCeEEEEEEEECCCCCCCHHHHHHHHHHHHhhc
Confidence 99999999999999999999999999999999999999999999988899999999998765444 468999999999
Q ss_pred CCCCCcceEEEeccccCCCCCccchHHHHHHHhhC
Q 011116 454 APYKKIRRVAFINSIPKSTAGKILRRELVTHAISG 488 (493)
Q Consensus 454 ~~~~~p~~~~~~~~lP~t~~GK~~r~~l~~~~~~~ 488 (493)
+++++|..++++++||+|++||++|+.|++.+...
T Consensus 577 ~~~~~P~~i~~v~~lP~t~~GKi~R~~L~~~~~~~ 611 (637)
T PRK00174 577 GPIAKPDVIQFAPGLPKTRSGKIMRRILRKIAEGE 611 (637)
T ss_pred CCccCCCEEEEcCCCCCCCCcchHHHHHHHHHcCC
Confidence 99999999999999999999999999999987654
No 12
>PLN02860 o-succinylbenzoate-CoA ligase
Probab=100.00 E-value=8.1e-66 Score=531.20 Aligned_cols=455 Identities=24% Similarity=0.354 Sum_probs=377.4
Q ss_pred hHHHHHHhhCCCCCCCEEEEECCCCCCcHHHHHHHHHHcCCeeccCCCCCCHHHHHHHHhhcCCeEEEEcCCCccc---C
Q 011116 18 TLSHALSKRDSLCRKTTSLTSSPLPPSTSPVLYFSLLSLGVVISPANPLSSTSEVSHQIQLSKPSIAFATSHTSYK---L 94 (493)
Q Consensus 18 ~lA~~L~~~~gl~~gd~V~l~~~~~~~~~~~~~lA~~~~G~~~v~i~~~~~~~~l~~~l~~~~~~~il~~~~~~~~---~ 94 (493)
++|++| .+.|+++||+|+++++ |+++++++++||+++|++++|+++.++.+++.++++++++++++++++.... +
T Consensus 44 ~la~~L-~~~Gv~~gd~V~v~~~-n~~~~~~~~la~~~~Gav~vpl~~~~~~~~l~~~l~~~~~~~i~~~~~~~~~~~~~ 121 (563)
T PLN02860 44 SLAAGL-LRLGLRNGDVVAIAAL-NSDLYLEWLLAVACAGGIVAPLNYRWSFEEAKSAMLLVRPVMLVTDETCSSWYEEL 121 (563)
T ss_pred HHHHHH-HHhCCCCCCEEEEEcC-CCHHHHHHHHHHhhccEEEEeCCcccCHHHHHHHHHhcCceEEEEecccchHHHHH
Confidence 359999 7789999999999999 9999999999999999999999999999999999999999999998754211 1
Q ss_pred C----CCCc-EEEecCch------hhhhhccCccc-c--cccCCCCCCCCCCeEEEEccCCCCCCccceecchHHHHHHH
Q 011116 95 P----SNLR-TILMDSPE------FISLLNQNEDV-A--DFANSNMTVYQSDPAAILYSSGTTGKVKGVLLSHLNVIAII 160 (493)
Q Consensus 95 ~----~~~~-~~~~~~~~------~~~~~~~~~~~-~--~~~~~~~~~~~~~~~~i~~TSGTTG~pK~v~~t~~~~~~~~ 160 (493)
. .... .+.++... +...+...... . ..........++++++++|||||||.||+|.++|.++..+.
T Consensus 122 ~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~i~~TSGTTG~PKgV~~s~~~~~~~~ 201 (563)
T PLN02860 122 QNDRLPSLMWQVFLESPSSSVFIFLNSFLTTEMLKQRALGTTELDYAWAPDDAVLICFTSGTTGRPKGVTISHSALIVQS 201 (563)
T ss_pred hhccCCceeEEEEecCcccccccchhhccccchhccCccccccccCCCCCCCeEEEEecCCCCCCCceEEeehHHHHHHH
Confidence 0 0111 12222111 11111111000 0 00111123457899999999999999999999999998776
Q ss_pred HHhhhhcccCCCCCCCCCCcEEEEecChhHHHHHHHHHHHHhcCCeEEEecCCCHHHHHHHHHhcCeeecccChHHHHHH
Q 011116 161 AGYYHVTEETDPNEGPPPHPVSFFTLPMFHVFGFFMLVRAASKGETLVFMERFDFEKMLKAVENYRVTYMPVSPPLIVAF 240 (493)
Q Consensus 161 ~~~~~~~~~~~~~~~~~~~~~~~~~~pl~~~~g~~~~~~~l~~G~~~~~~~~~~~~~~~~~l~~~~~t~l~~~P~~~~~l 240 (493)
......+ +..++|+++...|++|..++..++.++..|+++++.+.+++..+++.++++++|++.++|+++..|
T Consensus 202 ~~~~~~~-------~~~~~d~~l~~~pl~h~~g~~~~~~~l~~G~~~v~~~~~~~~~~~~~i~~~~vt~~~~~P~~~~~l 274 (563)
T PLN02860 202 LAKIAIV-------GYGEDDVYLHTAPLCHIGGLSSALAMLMVGACHVLLPKFDAKAALQAIKQHNVTSMITVPAMMADL 274 (563)
T ss_pred HHHHhhc-------CCCCCCEEEEecCchhhccHHHHHHHHHcCceEEecCCCCHHHHHHHHHHhCCeeEEeChHHHHHH
Confidence 6655444 347889999999999999998888999999999999889999999999999999999999999999
Q ss_pred HhcccC--CCCCCCCeeEEEecCCCCCHHHHHHHHHhCCCCceeccccccccCCccccccCCCC----------------
Q 011116 241 INSKLT--DKYDLSSLQLLGCGGAPLGKEVTLKFKEKFPNVEIRQGYGLTETGGAGSRVIGPDE---------------- 302 (493)
Q Consensus 241 ~~~~~~--~~~~l~~lr~v~~~Ge~~~~~~~~~~~~~~~~~~v~~~yG~tE~g~~~~~~~~~~~---------------- 302 (493)
++.... ....++++|.+++||+++++++.+++++.|+++++++.||+||++...........
T Consensus 275 ~~~~~~~~~~~~~~~lr~~~~gG~~l~~~~~~~~~~~~~~~~~~~~YG~TE~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 354 (563)
T PLN02860 275 ISLTRKSMTWKVFPSVRKILNGGGSLSSRLLPDAKKLFPNAKLFSAYGMTEACSSLTFMTLHDPTLESPKQTLQTVNQTK 354 (563)
T ss_pred HHhhhhhhccccccceeEEEeCCCcCCHHHHHHHHHhcCCCceecCCCccccCcccccccccccccccchhhhhhhcccc
Confidence 876432 23457899999999999999999999999988999999999999865443211110
Q ss_pred -----CCCCCccccccCCceEEEEcCCCCccCCCCCceEEEEeCccccccccCCcccccccccCCCeeeccceEEEcCCC
Q 011116 303 -----AERHGSVGRLAELMEAKIVDPATGEALPPGQKGELWLRGPTIMKGYVGDDKATSETVHSEGWLKTGDLCYFDSNG 377 (493)
Q Consensus 303 -----~~~~~~~g~p~~~~~~~i~d~~~~~~~~~g~~Gel~v~~~~~~~gy~~~~~~~~~~~~~~~~~~TgD~~~~~~~g 377 (493)
.....++|+|.++++++|++++ +|+.|||+++|+.++.||+++++.+.+.+..+|||+|||+++++++|
T Consensus 355 ~~~~~~~~~~~vG~p~~~~~v~i~~~~------~g~~Gel~v~g~~~~~GY~~~~~~t~~~~~~~g~~~TGDl~~~d~dG 428 (563)
T PLN02860 355 SSSVHQPQGVCVGKPAPHVELKIGLDE------SSRVGRILTRGPHVMLGYWGQNSETASVLSNDGWLDTGDIGWIDKAG 428 (563)
T ss_pred cccccccCCcccCCccCCcEEEEecCC------CCceeEEEEecCcccccccCCccccchhccCCCeEEccceEEEcCCC
Confidence 1112368999999999999844 57889999999999999999999999888889999999999999999
Q ss_pred cEEEEcccCCeEEeCceeeChHHHHHHHhcCCCcceEEEEeeeCCCCCeeEEEEEEeCCCC--------------CCCHH
Q 011116 378 FLFIVDRLKELIKYKAYQVPPVELEHLLHSNPEIADAAVIPYPDEEAGQIPMAFVVRKPGS--------------NITEA 443 (493)
Q Consensus 378 ~~~~~GR~~d~i~~~G~~i~~~~ie~~l~~~~~v~~~~v~~~~~~~~~~~~~~~v~~~~~~--------------~~~~~ 443 (493)
++++.||.+|+||.+|++|+|.+||+++.++|+|.+++|++.+++..++.+++++++.++. ..+.+
T Consensus 429 ~l~~~GR~~d~i~~~G~~v~p~eIE~~l~~~p~V~~~~v~~~~~~~~~~~~~a~v~~~~~~~~~~~~~~~~~~~~~~~~~ 508 (563)
T PLN02860 429 NLWLIGRSNDRIKTGGENVYPEEVEAVLSQHPGVASVVVVGVPDSRLTEMVVACVRLRDGWIWSDNEKENAKKNLTLSSE 508 (563)
T ss_pred CEEEeecccceeEECCEEccHHHHHHHHHhCCCcceeEEEEEecCcCCceEEEEEEECCccccccccchhhcccccccHH
Confidence 9999999999999999999999999999999999999999999988899999999987652 34567
Q ss_pred HHHHHHHh-cCCCCCCcceEEEe-ccccCCCCCccchHHHHHHHhh
Q 011116 444 EIMDFIAK-QVAPYKKIRRVAFI-NSIPKSTAGKILRRELVTHAIS 487 (493)
Q Consensus 444 ~l~~~l~~-~l~~~~~p~~~~~~-~~lP~t~~GK~~r~~l~~~~~~ 487 (493)
++.+++++ +|++|++|+.++++ ++||+|++||++|+.|++++.+
T Consensus 509 ~l~~~~~~~~L~~~~~P~~~~~~~~~lP~t~~GKi~r~~L~~~~~~ 554 (563)
T PLN02860 509 TLRHHCREKNLSRFKIPKLFVQWRKPFPLTTTGKIRRDEVRREVLS 554 (563)
T ss_pred HHHHHHhhCcccccccceEEEEEecCCCCCcccchhHHHHHHHHHH
Confidence 89999987 59999999988765 6799999999999999999865
No 13
>PLN02246 4-coumarate--CoA ligase
Probab=100.00 E-value=1.7e-65 Score=526.51 Aligned_cols=461 Identities=39% Similarity=0.651 Sum_probs=395.5
Q ss_pred hHHHHHHhhCCCCCCCEEEEECCCCCCcHHHHHHHHHHcCCeeccCCCCCCHHHHHHHHhhcCCeEEEEcCCCcccCCC-
Q 011116 18 TLSHALSKRDSLCRKTTSLTSSPLPPSTSPVLYFSLLSLGVVISPANPLSSTSEVSHQIQLSKPSIAFATSHTSYKLPS- 96 (493)
Q Consensus 18 ~lA~~L~~~~gl~~gd~V~l~~~~~~~~~~~~~lA~~~~G~~~v~i~~~~~~~~l~~~l~~~~~~~il~~~~~~~~~~~- 96 (493)
++|++| .+.|+++||+|+++++ |+++++++++||+++|++++|+++.++.+++..+++.+++++++++......+.+
T Consensus 62 ~la~~L-~~~g~~~gd~V~i~~~-~~~~~~~~~la~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~li~~~~~~~~~~~~ 139 (537)
T PLN02246 62 RVAAGL-HKLGIRQGDVVMLLLP-NCPEFVLAFLGASRRGAVTTTANPFYTPAEIAKQAKASGAKLIITQSCYVDKLKGL 139 (537)
T ss_pred HHHHHH-HHhCCCCCCEEEEECC-CChHHHHHHHHHHHcCEEEecCCCCCCHHHHHHHHHhcCCcEEEEccchHHHHHHH
Confidence 459999 7789999999999999 9999999999999999999999999999999999999999999998765553321
Q ss_pred ----CCcEEEecCc-----hhhhhhccCcccccccCCCCCCCCCCeEEEEccCCCCCCccceecchHHHHHHHHHhhhhc
Q 011116 97 ----NLRTILMDSP-----EFISLLNQNEDVADFANSNMTVYQSDPAAILYSSGTTGKVKGVLLSHLNVIAIIAGYYHVT 167 (493)
Q Consensus 97 ----~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~TSGTTG~pK~v~~t~~~~~~~~~~~~~~~ 167 (493)
...++.++.. .+..+..... .........++++++++|||||||.||+|.++|+++...........
T Consensus 140 ~~~~~~~~i~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~i~~TSGtTG~PKgv~~s~~~l~~~~~~~~~~~ 215 (537)
T PLN02246 140 AEDDGVTVVTIDDPPEGCLHFSELTQADE----NELPEVEISPDDVVALPYSSGTTGLPKGVMLTHKGLVTSVAQQVDGE 215 (537)
T ss_pred hhcCCceEEEeCCCCCCceeHHHHhcCCC----CCCCCCCCCccCEEEEEeCCCCCCCCceEEEeHHHHHHHHHHHhhcc
Confidence 2334444422 1222222211 11222345678999999999999999999999999988776543321
Q ss_pred ccCCCCCCCCCCcEEEEecChhHHHHH-HHHHHHHhcCCeEEEecCCCHHHHHHHHHhcCeeecccChHHHHHHHhcccC
Q 011116 168 EETDPNEGPPPHPVSFFTLPMFHVFGF-FMLVRAASKGETLVFMERFDFEKMLKAVENYRVTYMPVSPPLIVAFINSKLT 246 (493)
Q Consensus 168 ~~~~~~~~~~~~~~~~~~~pl~~~~g~-~~~~~~l~~G~~~~~~~~~~~~~~~~~l~~~~~t~l~~~P~~~~~l~~~~~~ 246 (493)
. ...++.++|++++.+|++|.+++ ..++.++..|+++++.+..++..+++.++++++|++.++|+++..|++....
T Consensus 216 ~---~~~~~~~~d~~l~~~pl~~~~~~~~~~~~~l~~G~~~~~~~~~~~~~~~~~i~~~~~t~~~~~p~~~~~l~~~~~~ 292 (537)
T PLN02246 216 N---PNLYFHSDDVILCVLPMFHIYSLNSVLLCGLRVGAAILIMPKFEIGALLELIQRHKVTIAPFVPPIVLAIAKSPVV 292 (537)
T ss_pred c---cccCCCCCcEEEEeechHHHHHHHHHHHHHHhcCCEEEEeCCCCHHHHHHHHHHhCceEEEcchHHHHHHhcCccc
Confidence 1 11245789999999999999998 5677889999999999888999999999999999999999999999887655
Q ss_pred CCCCCCCeeEEEecCCCCCHHHHHHHHHhCCCCceeccccccccCCccccccCC---CCCCCCCccccccCCceEEEEcC
Q 011116 247 DKYDLSSLQLLGCGGAPLGKEVTLKFKEKFPNVEIRQGYGLTETGGAGSRVIGP---DEAERHGSVGRLAELMEAKIVDP 323 (493)
Q Consensus 247 ~~~~l~~lr~v~~~Ge~~~~~~~~~~~~~~~~~~v~~~yG~tE~g~~~~~~~~~---~~~~~~~~~g~p~~~~~~~i~d~ 323 (493)
....++++|.+++||+++++++.+++++.|+++.+++.||+||++.+++.+... ......+++|+|.++++++++|+
T Consensus 293 ~~~~~~~lr~~~~gg~~l~~~~~~~~~~~~~~~~~~~~YG~tE~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~i~d~ 372 (537)
T PLN02246 293 EKYDLSSIRMVLSGAAPLGKELEDAFRAKLPNAVLGQGYGMTEAGPVLAMCLAFAKEPFPVKSGSCGTVVRNAELKIVDP 372 (537)
T ss_pred cccCccceeEEEEecCcCCHHHHHHHHHHcCCCeEeccccccccCcccccccccCCCCccccCCccccccCCcEEEEecC
Confidence 556678999999999999999999999999889999999999998765432111 11224567899999999999998
Q ss_pred CCCccCCCCCceEEEEeCccccccccCCcccccccccCCCeeeccceEEEcCCCcEEEEcccCCeEEeCceeeChHHHHH
Q 011116 324 ATGEALPPGQKGELWLRGPTIMKGYVGDDKATSETVHSEGWLKTGDLCYFDSNGFLFIVDRLKELIKYKAYQVPPVELEH 403 (493)
Q Consensus 324 ~~~~~~~~g~~Gel~v~~~~~~~gy~~~~~~~~~~~~~~~~~~TgD~~~~~~~g~~~~~GR~~d~i~~~G~~i~~~~ie~ 403 (493)
+++++++.|+.|||+++|+.++.||+++++.+...++.++||+|||+++++++|.+++.||.+|+||.+|.+|++.+||+
T Consensus 373 ~~~~~~~~g~~Gel~v~g~~~~~GY~~~~~~~~~~~~~~~~~~TGD~~~~~~~g~l~~~GR~dd~i~~~G~~i~~~eIE~ 452 (537)
T PLN02246 373 ETGASLPRNQPGEICIRGPQIMKGYLNDPEATANTIDKDGWLHTGDIGYIDDDDELFIVDRLKELIKYKGFQVAPAELEA 452 (537)
T ss_pred CCCCcCCCCCceEEEEECCchhccccCCchhhhhcccCCCCeeecceEEEeCCCeEEEEecccceEEECCEEECcHHHHH
Confidence 88999999999999999999999999999999888877899999999999999999999999999999999999999999
Q ss_pred HHhcCCCcceEEEEeeeCCCCCeeEEEEEEeCCCCCCCHHHHHHHHHhcCCCCCCcceEEEeccccCCCCCccchHHHHH
Q 011116 404 LLHSNPEIADAAVIPYPDEEAGQIPMAFVVRKPGSNITEAEIMDFIAKQVAPYKKIRRVAFINSIPKSTAGKILRRELVT 483 (493)
Q Consensus 404 ~l~~~~~v~~~~v~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~l~~~l~~~~~p~~~~~~~~lP~t~~GK~~r~~l~~ 483 (493)
+|.++|+|.+++|++..++..++.++++++..++...+.+++++++++++++++.|.++++++++|+|++||++|+.|++
T Consensus 453 ~l~~~~~v~~~~v~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~l~~~l~~~~~p~~i~~~~~~P~t~~GKi~r~~L~~ 532 (537)
T PLN02246 453 LLISHPSIADAAVVPMKDEVAGEVPVAFVVRSNGSEITEDEIKQFVAKQVVFYKRIHKVFFVDSIPKAPSGKILRKDLRA 532 (537)
T ss_pred HHHhCCCeeEEEEEcccCccCCceeEEEEEeCCCCCCCHHHHHHHHHhhCcCccccceEEEeccCCCCCcchhhHHHHHH
Confidence 99999999999999988887888889999988776778899999999999999999999999999999999999999999
Q ss_pred HHhh
Q 011116 484 HAIS 487 (493)
Q Consensus 484 ~~~~ 487 (493)
++..
T Consensus 533 ~~~~ 536 (537)
T PLN02246 533 KLAA 536 (537)
T ss_pred HHhc
Confidence 8754
No 14
>PRK04319 acetyl-CoA synthetase; Provisional
Probab=100.00 E-value=1.6e-65 Score=530.03 Aligned_cols=452 Identities=28% Similarity=0.401 Sum_probs=385.7
Q ss_pred HHHHHHhhCCCCCCCEEEEECCCCCCcHHHHHHHHHHcCCeeccCCCCCCHHHHHHHHhhcCCeEEEEcCCCcccCCC--
Q 011116 19 LSHALSKRDSLCRKTTSLTSSPLPPSTSPVLYFSLLSLGVVISPANPLSSTSEVSHQIQLSKPSIAFATSHTSYKLPS-- 96 (493)
Q Consensus 19 lA~~L~~~~gl~~gd~V~l~~~~~~~~~~~~~lA~~~~G~~~v~i~~~~~~~~l~~~l~~~~~~~il~~~~~~~~~~~-- 96 (493)
+|.+| .+.|+++||+|+++++ |+++++++++||+++|++++|+++.++.+++.++++.++++.+++++........
T Consensus 86 ~A~~L-~~~gv~~gd~V~i~~~-n~~~~~~~~la~~~~G~v~vpl~~~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~~~~ 163 (570)
T PRK04319 86 FANVL-KELGVEKGDRVFIFMP-RIPELYFALLGALKNGAIVGPLFEAFMEEAVRDRLEDSEAKVLITTPALLERKPADD 163 (570)
T ss_pred HHHHH-HHhCCCCCCEEEEECC-CCHHHHHHHHHHHHcCcEEcccccccCHHHHHHHHHccCCcEEEEChhhhhccchhc
Confidence 49999 7789999999999999 9999999999999999999999999999999999999999999998765443221
Q ss_pred --CC-cEEEecCc--------hhhhhhccCcccccccCCCCCCCCCCeEEEEccCCCCCCccceecchHHHHHHHHHhhh
Q 011116 97 --NL-RTILMDSP--------EFISLLNQNEDVADFANSNMTVYQSDPAAILYSSGTTGKVKGVLLSHLNVIAIIAGYYH 165 (493)
Q Consensus 97 --~~-~~~~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~TSGTTG~pK~v~~t~~~~~~~~~~~~~ 165 (493)
.. .++.++.. ++.+++.... .........++++++++|||||||.||+|.++|.++.........
T Consensus 164 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~a~i~~TSGTTG~PKgV~~s~~~l~~~~~~~~~ 239 (570)
T PRK04319 164 LPSLKHVLLVGEDVEEGPGTLDFNALMEQAS----DEFDIEWTDREDGAILHYTSGSTGKPKGVLHVHNAMLQHYQTGKY 239 (570)
T ss_pred CCCceEEEEECCCcCCCcCccCHHHHHhhcC----CcCCccccCCCCCEEEEeCCCCCCCCCEEEEecHHHHHHHHHHHH
Confidence 11 23333221 2333322211 112223446689999999999999999999999999887776665
Q ss_pred hcccCCCCCCCCCCcEEEEecChhHHHHH-HHHHHHHhcCCeEEEec-CCCHHHHHHHHHhcCeeecccChHHHHHHHhc
Q 011116 166 VTEETDPNEGPPPHPVSFFTLPMFHVFGF-FMLVRAASKGETLVFME-RFDFEKMLKAVENYRVTYMPVSPPLIVAFINS 243 (493)
Q Consensus 166 ~~~~~~~~~~~~~~~~~~~~~pl~~~~g~-~~~~~~l~~G~~~~~~~-~~~~~~~~~~l~~~~~t~l~~~P~~~~~l~~~ 243 (493)
.+. +.+++++++..|++|..+. ..++.++..|+++++.. .+++..+++.++++++|++.++|++++.|.+.
T Consensus 240 ~~~-------~~~~d~~~~~~~~~~~~g~~~~~~~~l~~G~~~v~~~~~~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~ 312 (570)
T PRK04319 240 VLD-------LHEDDVYWCTADPGWVTGTSYGIFAPWLNGATNVIDGGRFSPERWYRILEDYKVTVWYTAPTAIRMLMGA 312 (570)
T ss_pred hcC-------CCCCceEEecCChHHhhCchHHHHHHHhcCceEEEECCCCCHHHHHHHHHHcCCeEEEeCHHHHHHHHhc
Confidence 553 4788999999999999887 67889999999998874 57899999999999999999999999999875
Q ss_pred cc--CCCCCCCCeeEEEecCCCCCHHHHHHHHHhCCCCceeccccccccCCccccccCCCCCCCCCccccccCCceEEEE
Q 011116 244 KL--TDKYDLSSLQLLGCGGAPLGKEVTLKFKEKFPNVEIRQGYGLTETGGAGSRVIGPDEAERHGSVGRLAELMEAKIV 321 (493)
Q Consensus 244 ~~--~~~~~l~~lr~v~~~Ge~~~~~~~~~~~~~~~~~~v~~~yG~tE~g~~~~~~~~~~~~~~~~~~g~p~~~~~~~i~ 321 (493)
.. ....+++++|.++++|+++++++.+++++.+ +.++++.||+||++..+... ........+++|+|.++++++|+
T Consensus 313 ~~~~~~~~~~~~lr~~~~gG~~l~~~~~~~~~~~~-g~~i~~~YG~tE~~~~~~~~-~~~~~~~~~~~G~p~~g~~~~i~ 390 (570)
T PRK04319 313 GDDLVKKYDLSSLRHILSVGEPLNPEVVRWGMKVF-GLPIHDNWWMTETGGIMIAN-YPAMDIKPGSMGKPLPGIEAAIV 390 (570)
T ss_pred CCcccccCCcccceEEEEcccCCCHHHHHHHHHHh-CCCeEeceeecccCCEEEec-CCCCCCCCCcCcCCCCCCEEEEE
Confidence 43 2344578999999999999999999999988 78999999999998765432 22223356789999999999999
Q ss_pred cCCCCccCCCCCceEEEEeC--ccccccccCCcccccccccCCCeeeccceEEEcCCCcEEEEcccCCeEEeCceeeChH
Q 011116 322 DPATGEALPPGQKGELWLRG--PTIMKGYVGDDKATSETVHSEGWLKTGDLCYFDSNGFLFIVDRLKELIKYKAYQVPPV 399 (493)
Q Consensus 322 d~~~~~~~~~g~~Gel~v~~--~~~~~gy~~~~~~~~~~~~~~~~~~TgD~~~~~~~g~~~~~GR~~d~i~~~G~~i~~~ 399 (493)
| +++.++++|+.|||+++| +.++.||+++++.+.+.+. +|||+|||+++++++|.+++.||.+|+|+.+|++|+|.
T Consensus 391 d-~~~~~~~~g~~Gel~i~~~~~~~~~GY~~~~~~~~~~~~-~gw~~TGDl~~~~~~g~l~~~GR~~d~i~~~G~~i~p~ 468 (570)
T PRK04319 391 D-DQGNELPPNRMGNLAIKKGWPSMMRGIWNNPEKYESYFA-GDWYVSGDSAYMDEDGYFWFQGRVDDVIKTSGERVGPF 468 (570)
T ss_pred C-CCCCCCCCCCceEEEEcCCCChHHhHhcCCHHHhhhhhc-CCceEeCcEEEECCCeeEEEEecCCCEEEECCEEECHH
Confidence 9 667788999999999997 8999999999999988885 89999999999999999999999999999999999999
Q ss_pred HHHHHHhcCCCcceEEEEeeeCCCCCeeEEEEEEeCCCCCCCH---HHHHHHHHhcCCCCCCcceEEEeccccCCCCCcc
Q 011116 400 ELEHLLHSNPEIADAAVIPYPDEEAGQIPMAFVVRKPGSNITE---AEIMDFIAKQVAPYKKIRRVAFINSIPKSTAGKI 476 (493)
Q Consensus 400 ~ie~~l~~~~~v~~~~v~~~~~~~~~~~~~~~v~~~~~~~~~~---~~l~~~l~~~l~~~~~p~~~~~~~~lP~t~~GK~ 476 (493)
+||++|.++|.|.+++|++.+++..++.+++++++.++...+. ++++++++++|+.|++|..++++++||+|++||+
T Consensus 469 eIE~~l~~~~~V~~~~v~g~~~~~~g~~~~a~v~~~~~~~~~~~~~~~l~~~~~~~l~~~~~P~~i~~v~~iP~t~~GKv 548 (570)
T PRK04319 469 EVESKLMEHPAVAEAGVIGKPDPVRGEIIKAFVALRPGYEPSEELKEEIRGFVKKGLGAHAAPREIEFKDKLPKTRSGKI 548 (570)
T ss_pred HHHHHHhhCCCeeecceecccCcCCceEEEEEEEECCCCCCCHHHHHHHHHHHHHhcccccCCcEEEEeCCCCCCCchhh
Confidence 9999999999999999999999888999999999877644332 6899999999999999999999999999999999
Q ss_pred chHHHHHHHhh
Q 011116 477 LRRELVTHAIS 487 (493)
Q Consensus 477 ~r~~l~~~~~~ 487 (493)
+|+.|++++.+
T Consensus 549 ~r~~L~~~~~~ 559 (570)
T PRK04319 549 MRRVLKAWELG 559 (570)
T ss_pred hHHHHHHHHhC
Confidence 99999998754
No 15
>PRK13295 cyclohexanecarboxylate-CoA ligase; Reviewed
Probab=100.00 E-value=6.5e-65 Score=523.22 Aligned_cols=458 Identities=26% Similarity=0.415 Sum_probs=390.1
Q ss_pred HHHHHHhhCCCCCCCEEEEECCCCCCcHHHHHHHHHHcCCeeccCCCCCCHHHHHHHHhhcCCeEEEEcCCCcc------
Q 011116 19 LSHALSKRDSLCRKTTSLTSSPLPPSTSPVLYFSLLSLGVVISPANPLSSTSEVSHQIQLSKPSIAFATSHTSY------ 92 (493)
Q Consensus 19 lA~~L~~~~gl~~gd~V~l~~~~~~~~~~~~~lA~~~~G~~~v~i~~~~~~~~l~~~l~~~~~~~il~~~~~~~------ 92 (493)
+|++| .+.|+++||+|+++++ |+++++++++||+++|++++|+++.++.+++.++++.+++++++++++...
T Consensus 68 ~a~~L-~~~g~~~g~~Val~~~-n~~e~~~~~la~~~~G~~~vpl~~~~~~~~l~~~l~~~~~~~li~~~~~~~~~~~~~ 145 (547)
T PRK13295 68 VAVGL-ARLGVGRGDVVSCQLP-NWWEFTVLYLACSRIGAVLNPLMPIFRERELSFMLKHAESKVLVVPKTFRGFDHAAM 145 (547)
T ss_pred HHHHH-HHhCCCCCCEEEEECC-CChHHHHHHHHHHhcCcEEeccccccCHHHHHHHHHhcCceEEEEeccccCcchHHH
Confidence 49999 7789999999999999 999999999999999999999999999999999999999999999875421
Q ss_pred --cCCC---CC-cEEEecC---chhhhhhccCcc----cccccCCCCCCCCCCeEEEEccCCCCCCccceecchHHHHHH
Q 011116 93 --KLPS---NL-RTILMDS---PEFISLLNQNED----VADFANSNMTVYQSDPAAILYSSGTTGKVKGVLLSHLNVIAI 159 (493)
Q Consensus 93 --~~~~---~~-~~~~~~~---~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~i~~TSGTTG~pK~v~~t~~~~~~~ 159 (493)
.+.. .. .++.++. .++..+...... .............+++++++|||||||.||+|.++|.++...
T Consensus 146 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~i~~TSGTTG~PK~v~~s~~~l~~~ 225 (547)
T PRK13295 146 ARRLRPELPALRHVVVVGGDGADSFEALLITPAWEQEPDAPAILARLRPGPDDVTQLIYTSGTTGEPKGVMHTANTLMAN 225 (547)
T ss_pred HHHHhhhCCCcceEEEecCCCccCHHHHhhCCccccccccccccccCCCCCcceeEEEeCCCCCCCCCEEEeccHHHHHH
Confidence 1111 11 2333332 123333321100 000011122346689999999999999999999999999888
Q ss_pred HHHhhhhcccCCCCCCCCCCcEEEEecChhHHHHH-HHHHHHHhcCCeEEEecCCCHHHHHHHHHhcCeeecccChHHHH
Q 011116 160 IAGYYHVTEETDPNEGPPPHPVSFFTLPMFHVFGF-FMLVRAASKGETLVFMERFDFEKMLKAVENYRVTYMPVSPPLIV 238 (493)
Q Consensus 160 ~~~~~~~~~~~~~~~~~~~~~~~~~~~pl~~~~g~-~~~~~~l~~G~~~~~~~~~~~~~~~~~l~~~~~t~l~~~P~~~~ 238 (493)
+......+. +.+++++++..|++|..++ ..++.++..|+++++.+..++..+++.++++++|++.++|+++.
T Consensus 226 ~~~~~~~~~-------~~~~~~~l~~~p~~h~~g~~~~~~~~l~~G~~~~~~~~~~~~~~~~~l~~~~vt~~~~~p~~~~ 298 (547)
T PRK13295 226 IVPYAERLG-------LGADDVILMASPMAHQTGFMYGLMMPVMLGATAVLQDIWDPARAAELIRTEGVTFTMASTPFLT 298 (547)
T ss_pred HHHHHHHhC-------CCCCCeEEEecCchhhhhHHHHHHHHHHcCCeEEeCCCCCHHHHHHHHHHcCCcEEEecHHHHH
Confidence 777666553 4789999999999999987 67889999999999998889999999999999999999999999
Q ss_pred HHHhcccCCCCCCCCeeEEEecCCCCCHHHHHHHHHhCCCCceeccccccccCCccccccCCCCCCCCCccccccCCceE
Q 011116 239 AFINSKLTDKYDLSSLQLLGCGGAPLGKEVTLKFKEKFPNVEIRQGYGLTETGGAGSRVIGPDEAERHGSVGRLAELMEA 318 (493)
Q Consensus 239 ~l~~~~~~~~~~l~~lr~v~~~Ge~~~~~~~~~~~~~~~~~~v~~~yG~tE~g~~~~~~~~~~~~~~~~~~g~p~~~~~~ 318 (493)
.+..........++++|.+++||+++++++.+++++.| ++++++.||+||++.+.+............+.|+|.+++++
T Consensus 299 ~l~~~~~~~~~~~~~l~~~~~~G~~l~~~~~~~~~~~~-~~~~~~~YG~TE~~~~~~~~~~~~~~~~~~~~G~~~~~~~v 377 (547)
T PRK13295 299 DLTRAVKESGRPVSSLRTFLCAGAPIPGALVERARAAL-GAKIVSAWGMTENGAVTLTKLDDPDERASTTDGCPLPGVEV 377 (547)
T ss_pred HHHhcccccCCCcccceEEEEecCCCCHHHHHHHHHHh-CCCeEEeccCCCCCCeeeccCCCcchhccCccccccCCcEE
Confidence 99887666666788999999999999999999999999 89999999999998765543222222345678999999999
Q ss_pred EEEcCCCCccCCCCCceEEEEeCccccccccCCcccccccccCCCeeeccceEEEcCCCcEEEEcccCCeEEeCceeeCh
Q 011116 319 KIVDPATGEALPPGQKGELWLRGPTIMKGYVGDDKATSETVHSEGWLKTGDLCYFDSNGFLFIVDRLKELIKYKAYQVPP 398 (493)
Q Consensus 319 ~i~d~~~~~~~~~g~~Gel~v~~~~~~~gy~~~~~~~~~~~~~~~~~~TgD~~~~~~~g~~~~~GR~~d~i~~~G~~i~~ 398 (493)
+|+| +++++++.|+.|||+++|+.++.||+++++.+... .+|||+|||+++++++|.+++.||.+|++|.+|++|+|
T Consensus 378 ~i~d-~~~~~~~~g~~Gel~v~g~~~~~gY~~~~~~t~~~--~~g~~~TGD~~~~~~~g~l~~~gR~~~~i~~~G~~v~p 454 (547)
T PRK13295 378 RVVD-ADGAPLPAGQIGRLQVRGCSNFGGYLKRPQLNGTD--ADGWFDTGDLARIDADGYIRISGRSKDVIIRGGENIPV 454 (547)
T ss_pred EEEC-CCCCCCCCCCCCeEEEEcCcccccccCCccccccC--CCCCeecceEEEEcCCceEEEEeccCCeEEECCEEECH
Confidence 9999 56889999999999999999999999999888765 47899999999999999999999999999999999999
Q ss_pred HHHHHHHhcCCCcceEEEEeeeCCCCCeeEEEEEEeCCCCCCCHHHHHHHHHh-cCCCCCCcceEEEeccccCCCCCccc
Q 011116 399 VELEHLLHSNPEIADAAVIPYPDEEAGQIPMAFVVRKPGSNITEAEIMDFIAK-QVAPYKKIRRVAFINSIPKSTAGKIL 477 (493)
Q Consensus 399 ~~ie~~l~~~~~v~~~~v~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~l~~-~l~~~~~p~~~~~~~~lP~t~~GK~~ 477 (493)
.+||++|.++++|.+++|++.+++..++.+++++++.++...+.+++.+++++ +++++++|++++++++||+|.+||++
T Consensus 455 ~~IE~~l~~~~~v~~~~v~~~~~~~~g~~~~~~v~~~~~~~~~~~~l~~~~~~~~l~~~~~P~~i~~v~~lP~t~sgK~~ 534 (547)
T PRK13295 455 VEIEALLYRHPAIAQVAIVAYPDERLGERACAFVVPRPGQSLDFEEMVEFLKAQKVAKQYIPERLVVRDALPRTPSGKIQ 534 (547)
T ss_pred HHHHHHHHhCCCeeeEEEEeeecCCCCcEEEEEEEeCCCCCCCHHHHHHHHHhccCccccCCcEEEEeccCCCCCCcccc
Confidence 99999999999999999999998888889999999887766777899999986 79999999999999999999999999
Q ss_pred hHHHHHHHhhCC
Q 011116 478 RRELVTHAISGN 489 (493)
Q Consensus 478 r~~l~~~~~~~~ 489 (493)
|+.|++++.+.+
T Consensus 535 r~~L~~~~~~~~ 546 (547)
T PRK13295 535 KFRLREMLRGED 546 (547)
T ss_pred HHHHHHHHhcCC
Confidence 999999887643
No 16
>PRK07529 AMP-binding domain protein; Validated
Probab=100.00 E-value=5.8e-65 Score=530.17 Aligned_cols=454 Identities=27% Similarity=0.411 Sum_probs=378.8
Q ss_pred HHHHHHhhCCCCCCCEEEEECCCCCCcHHHHHHHHHHcCCeeccCCCCCCHHHHHHHHhhcCCeEEEEcCCCcc------
Q 011116 19 LSHALSKRDSLCRKTTSLTSSPLPPSTSPVLYFSLLSLGVVISPANPLSSTSEVSHQIQLSKPSIAFATSHTSY------ 92 (493)
Q Consensus 19 lA~~L~~~~gl~~gd~V~l~~~~~~~~~~~~~lA~~~~G~~~v~i~~~~~~~~l~~~l~~~~~~~il~~~~~~~------ 92 (493)
+|++| .+.|+++||+|+++++ |++++++++|||+++| +++|+++.++.+++.++++.+++++++++.....
T Consensus 71 ~A~~L-~~~Gi~~gd~V~i~~~-n~~e~~~~~lA~~~~G-i~~pi~~~~~~~~i~~~l~~~~~~~li~~~~~~~~~~~~~ 147 (632)
T PRK07529 71 TANLL-HSLGVGPGDVVAFLLP-NLPETHFALWGGEAAG-IANPINPLLEPEQIAELLRAAGAKVLVTLGPFPGTDIWQK 147 (632)
T ss_pred HHHHH-HHcCCCCCCEEEEECC-CCHHHHHHHHHHHHhC-EEEeCCCcCCHHHHHHHHHhcCCcEEEEeCCCCCchHHHH
Confidence 59999 7889999999999999 9999999999999999 5689999999999999999999999999865321
Q ss_pred ------cCCCCCcEEEecCc-----------------------hhhhhhccCcccccccCCCCCCCCCCeEEEEccCCCC
Q 011116 93 ------KLPSNLRTILMDSP-----------------------EFISLLNQNEDVADFANSNMTVYQSDPAAILYSSGTT 143 (493)
Q Consensus 93 ------~~~~~~~~~~~~~~-----------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~TSGTT 143 (493)
..+....++.++.. .|...+..... ..........++++++++||||||
T Consensus 148 ~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~d~~a~i~~TSGTT 225 (632)
T PRK07529 148 VAEVLAALPELRTVVEVDLARYLPGPKRLAVPLIRRKAHARILDFDAELARQPG--DRLFSGRPIGPDDVAAYFHTGGTT 225 (632)
T ss_pred HHHHHhcCCcceeEEEecCcccccccccccccccccccccccCCHHHHHhcCCC--ccccccCCCCcCceEEEEECCCcc
Confidence 11111112233221 12222222110 001112234678999999999999
Q ss_pred CCccceecchHHHHHHHHHhhhhcccCCCCCCCCCCcEEEEecChhHHHHH-HHHHHHHhcCCeEEEecCC------CHH
Q 011116 144 GKVKGVLLSHLNVIAIIAGYYHVTEETDPNEGPPPHPVSFFTLPMFHVFGF-FMLVRAASKGETLVFMERF------DFE 216 (493)
Q Consensus 144 G~pK~v~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pl~~~~g~-~~~~~~l~~G~~~~~~~~~------~~~ 216 (493)
|.||+|.++|.++..+.......+ ++.+++++++.+|++|..+. ..++.++..|+++++.++. ...
T Consensus 226 G~PK~v~~sh~~l~~~~~~~~~~~-------~~~~~d~~l~~~pl~h~~~~~~~~~~~l~~G~~vv~~~~~~~~~~~~~~ 298 (632)
T PRK07529 226 GMPKLAQHTHGNEVANAWLGALLL-------GLGPGDTVFCGLPLFHVNALLVTGLAPLARGAHVVLATPQGYRGPGVIA 298 (632)
T ss_pred CcCCEEEEcHHHHHHHHHHHHHhc-------CCCCCCEEEEecCchhhhHHHHHHHHHHHCCCEEEecCccccCcchHHH
Confidence 999999999999988776655555 34789999999999999998 5688899999999997531 136
Q ss_pred HHHHHHHhcCeeecccChHHHHHHHhcccCCCCCCCCeeEEEecCCCCCHHHHHHHHHhCCCCceeccccccccCCcccc
Q 011116 217 KMLKAVENYRVTYMPVSPPLIVAFINSKLTDKYDLSSLQLLGCGGAPLGKEVTLKFKEKFPNVEIRQGYGLTETGGAGSR 296 (493)
Q Consensus 217 ~~~~~l~~~~~t~l~~~P~~~~~l~~~~~~~~~~l~~lr~v~~~Ge~~~~~~~~~~~~~~~~~~v~~~yG~tE~g~~~~~ 296 (493)
.+++.++++++|++.++|+++..|++.... ..+++++|.+++||+++++++.+++++.+ ++++++.||+||++.+...
T Consensus 299 ~~~~~i~~~~vt~~~~~P~~~~~l~~~~~~-~~~~~slr~v~~gg~~l~~~l~~~~~~~~-g~~l~~~YG~TE~~~~~~~ 376 (632)
T PRK07529 299 NFWKIVERYRINFLSGVPTVYAALLQVPVD-GHDISSLRYALCGAAPLPVEVFRRFEAAT-GVRIVEGYGLTEATCVSSV 376 (632)
T ss_pred HHHHHHHHhCCeEEEeHHHHHHHHHhCccc-CCCccceEEEEEcCCCCCHHHHHHHHHHh-CCcEeeeecccccCccccc
Confidence 889999999999999999999999886532 34678999999999999999999999998 8999999999999876554
Q ss_pred ccCCCCCCCCCccccccCCceEEEEcC-CCC---ccCCCCCceEEEEeCccccccccCCcccccccccCCCeeeccceEE
Q 011116 297 VIGPDEAERHGSVGRLAELMEAKIVDP-ATG---EALPPGQKGELWLRGPTIMKGYVGDDKATSETVHSEGWLKTGDLCY 372 (493)
Q Consensus 297 ~~~~~~~~~~~~~g~p~~~~~~~i~d~-~~~---~~~~~g~~Gel~v~~~~~~~gy~~~~~~~~~~~~~~~~~~TgD~~~ 372 (493)
. ........+++|+|++++.+++++. +++ ++++.|+.|||+++|+.++.||++++. +...+..+|||+|||+++
T Consensus 377 ~-~~~~~~~~~svG~~~p~~~v~i~~~d~~g~~~~~~~~g~~Gel~v~gp~v~~GY~~~~~-~~~~~~~~gw~~TGDlg~ 454 (632)
T PRK07529 377 N-PPDGERRIGSVGLRLPYQRVRVVILDDAGRYLRDCAVDEVGVLCIAGPNVFSGYLEAAH-NKGLWLEDGWLNTGDLGR 454 (632)
T ss_pred C-CccccccCCCcccccCCceEEEEEcCCCCcccccCCCCCceEEEEECCCccccccCCcc-ccccccCCCceEcCcEEE
Confidence 2 2222346688999999999988532 345 788999999999999999999998654 445555689999999999
Q ss_pred EcCCCcEEEEcccCCeEEeCceeeChHHHHHHHhcCCCcceEEEEeeeCCCCCeeEEEEEEeCCCCCCCHHHHHHHHHhc
Q 011116 373 FDSNGFLFIVDRLKELIKYKAYQVPPVELEHLLHSNPEIADAAVIPYPDEEAGQIPMAFVVRKPGSNITEAEIMDFIAKQ 452 (493)
Q Consensus 373 ~~~~g~~~~~GR~~d~i~~~G~~i~~~~ie~~l~~~~~v~~~~v~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~l~~~ 452 (493)
+++||++++.||.+|+||++|.+|+|.+||++|.++|+|.++++++.+++..++.++++|++.++...+.++++++++++
T Consensus 455 ~d~dG~l~i~GR~~d~i~~~G~~i~p~eIE~~l~~~p~V~~a~vvg~~d~~~ge~~~a~v~l~~~~~~~~~~l~~~~~~~ 534 (632)
T PRK07529 455 IDADGYFWLTGRAKDLIIRGGHNIDPAAIEEALLRHPAVALAAAVGRPDAHAGELPVAYVQLKPGASATEAELLAFARDH 534 (632)
T ss_pred EcCCceEEEEecccCEEEeCCEEECHHHHHHHHHhCCCeeEEEEEeccCCCCCceeEEEEEEcCCCCCCHHHHHHHHHHh
Confidence 99999999999999999999999999999999999999999999999998889999999999988888889999999999
Q ss_pred CC-CCCCcceEEEeccccCCCCCccchHHHHHHHhhC
Q 011116 453 VA-PYKKIRRVAFINSIPKSTAGKILRRELVTHAISG 488 (493)
Q Consensus 453 l~-~~~~p~~~~~~~~lP~t~~GK~~r~~l~~~~~~~ 488 (493)
++ .+++|+.++++++||+|++||++|+.||+.+...
T Consensus 535 l~~~~~~P~~i~~v~~lP~t~~GKi~r~~Lr~~~~~~ 571 (632)
T PRK07529 535 IAERAAVPKHVRILDALPKTAVGKIFKPALRRDAIRR 571 (632)
T ss_pred cchhccCCcEEEEecCCCCCCCCcccHHHHHHHHHHH
Confidence 86 5799999999999999999999999999998764
No 17
>PRK06334 long chain fatty acid--[acyl-carrier-protein] ligase; Validated
Probab=100.00 E-value=2.1e-65 Score=524.41 Aligned_cols=450 Identities=24% Similarity=0.303 Sum_probs=366.4
Q ss_pred HHHHHHhhCCCCCCCEEEEECCCCCCcHHHHHHHHHHcCCeeccCCCCCCHHHHHHHHhhcCCeEEEEcCCCcccCCC--
Q 011116 19 LSHALSKRDSLCRKTTSLTSSPLPPSTSPVLYFSLLSLGVVISPANPLSSTSEVSHQIQLSKPSIAFATSHTSYKLPS-- 96 (493)
Q Consensus 19 lA~~L~~~~gl~~gd~V~l~~~~~~~~~~~~~lA~~~~G~~~v~i~~~~~~~~l~~~l~~~~~~~il~~~~~~~~~~~-- 96 (493)
+|++| .+ .+||+|+++++ |+++++++++||+++|++++|+++.++.+++.++++.+++++++++.+....+.+
T Consensus 58 lA~~L-~~---~~gd~Val~~~-n~~e~~~~~lA~~~~G~v~vpl~~~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~~~~ 132 (539)
T PRK06334 58 LATKV-SK---YPDQHIGIMMP-ASAGAYIAYFATLLSGKIPVMINWSQGLREVTACANLVGVTHVLTSKQLMQHLAQTH 132 (539)
T ss_pred HHHHH-hh---ccCCeEEEEcC-CchHHHHHHHHHHhcCCeeEecCcccchHHHHHHHHHcCCCEEEehHHHHHHHhhhh
Confidence 48888 44 48999999999 9999999999999999999999999999999999999999999998755443322
Q ss_pred ------CCcEEEecCc----hhhhhhccC---cccccc---cCCCCCCCCCCeEEEEccCCCCCCccceecchHHHHHHH
Q 011116 97 ------NLRTILMDSP----EFISLLNQN---EDVADF---ANSNMTVYQSDPAAILYSSGTTGKVKGVLLSHLNVIAII 160 (493)
Q Consensus 97 ------~~~~~~~~~~----~~~~~~~~~---~~~~~~---~~~~~~~~~~~~~~i~~TSGTTG~pK~v~~t~~~~~~~~ 160 (493)
...++.+++. .+....... ...... ........++++++++|||||||.||+|.++|+++....
T Consensus 133 ~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~a~i~~TSGTTG~PKgV~~th~~l~~~~ 212 (539)
T PRK06334 133 GEDAEYPFSLIYMEEVRKELSFWEKCRIGIYMSIPFEWLMRWFGVSDKDPEDVAVILFTSGTEKLPKGVPLTHANLLANQ 212 (539)
T ss_pred hccccccccEEEEehhhhhccHHHhhhhhhhhcCCchhhhhcccCCCCCcCCEEEEEECCCCCCCCCEEEEcHHHHHHHH
Confidence 1123333221 011110000 000000 001124567899999999999999999999999998877
Q ss_pred HHhhhhcccCCCCCCCCCCcEEEEecChhHHHHH-HHHHHHHhcCCeEEEec-CCCHHHHHHHHHhcCeeecccChHHHH
Q 011116 161 AGYYHVTEETDPNEGPPPHPVSFFTLPMFHVFGF-FMLVRAASKGETLVFME-RFDFEKMLKAVENYRVTYMPVSPPLIV 238 (493)
Q Consensus 161 ~~~~~~~~~~~~~~~~~~~~~~~~~~pl~~~~g~-~~~~~~l~~G~~~~~~~-~~~~~~~~~~l~~~~~t~l~~~P~~~~ 238 (493)
......+ +..++|++++.+|++|.+++ ..++.++..|+++++.. .+++..+++.++++++|++.++|+++.
T Consensus 213 ~~~~~~~-------~~~~~d~~l~~~p~~h~~g~~~~~~~~l~~G~~vv~~~~~~~~~~~~~~i~~~~~t~~~~~P~~~~ 285 (539)
T PRK06334 213 RACLKFF-------SPKEDDVMMSFLPPFHAYGFNSCTLFPLLSGVPVVFAYNPLYPKKIVEMIDEAKVTFLGSTPVFFD 285 (539)
T ss_pred HHHHHhc-------CCCCCceEEEecchHhhhhhHHHHHHHHHcCCeEEEecCCCCHHHHHHHHHHhCCcEEEecHHHHH
Confidence 6665555 34788999999999999998 45788999999998874 578999999999999999999999999
Q ss_pred HHHhcccCCCCCCCCeeEEEecCCCCCHHHHHHHHHhCCCCceeccccccccCCccccccCCCCCCCCCccccccCCceE
Q 011116 239 AFINSKLTDKYDLSSLQLLGCGGAPLGKEVTLKFKEKFPNVEIRQGYGLTETGGAGSRVIGPDEAERHGSVGRLAELMEA 318 (493)
Q Consensus 239 ~l~~~~~~~~~~l~~lr~v~~~Ge~~~~~~~~~~~~~~~~~~v~~~yG~tE~g~~~~~~~~~~~~~~~~~~g~p~~~~~~ 318 (493)
.|++........++++|.+++||+++++++.+++++.|+++.+++.||+||++.+++... ........++|+|++++++
T Consensus 286 ~l~~~~~~~~~~~~~lr~i~~gG~~l~~~~~~~~~~~~~~~~i~~~YG~TE~~~~~~~~~-~~~~~~~~~vG~p~~g~~v 364 (539)
T PRK06334 286 YILKTAKKQESCLPSLRFVVIGGDAFKDSLYQEALKTFPHIQLRQGYGTTECSPVITINT-VNSPKHESCVGMPIRGMDV 364 (539)
T ss_pred HHHHhhhhcccccccccEEEECCccCCHHHHHHHHHHCCCCeEEecccccccCceEEecc-CCCCCCCCcCceecCCCEE
Confidence 998876555566889999999999999999999999998899999999999987655422 2222344679999999999
Q ss_pred EEEcCCCCccCCCCCceEEEEeCccccccccCCccccccc-ccCCCeeeccceEEEcCCCcEEEEcccCCeEEeCceeeC
Q 011116 319 KIVDPATGEALPPGQKGELWLRGPTIMKGYVGDDKATSET-VHSEGWLKTGDLCYFDSNGFLFIVDRLKELIKYKAYQVP 397 (493)
Q Consensus 319 ~i~d~~~~~~~~~g~~Gel~v~~~~~~~gy~~~~~~~~~~-~~~~~~~~TgD~~~~~~~g~~~~~GR~~d~i~~~G~~i~ 397 (493)
+|+|++++.+++.|+.|||+++|+.++.||+++++.+... ...++||+|||+|+++++|.+++.||.+|+||++|++|+
T Consensus 365 ~i~d~~~~~~~~~g~~Gel~v~g~~~~~GY~~~~~~~~~~~~~~~~w~~TGD~g~~d~~G~l~~~GR~~d~ik~~G~~v~ 444 (539)
T PRK06334 365 LIVSEETKVPVSSGETGLVLTRGTSLFSGYLGEDFGQGFVELGGETWYVTGDLGYVDRHGELFLKGRLSRFVKIGAEMVS 444 (539)
T ss_pred EEEcCCCCccCCCCceEEEEEecCcccccccCCcccccceeeCCceeEECCCEEEECCCCeEEEEeccCCeEEECCEEEC
Confidence 9999778899999999999999999999999998765432 234689999999999999999999999999999999999
Q ss_pred hHHHHHHHhcCCCcce------EEEEeeeCCCCCeeEEEEEEeCCCCCCCHHHHHHHHHhc-CCCCCCcceEEEeccccC
Q 011116 398 PVELEHLLHSNPEIAD------AAVIPYPDEEAGQIPMAFVVRKPGSNITEAEIMDFIAKQ-VAPYKKIRRVAFINSIPK 470 (493)
Q Consensus 398 ~~~ie~~l~~~~~v~~------~~v~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~l~~~-l~~~~~p~~~~~~~~lP~ 470 (493)
|.+||++|.+||+|.+ +++++.+++ ...++++++.. .+.++++++++++ ++.|++|+.+.++++||+
T Consensus 445 p~eIE~~l~~~~~v~~~~~~~~~~v~~~~~~--~~~~~~~~~~~----~~~~~~~~~l~~~~~~~~~~P~~i~~v~~lP~ 518 (539)
T PRK06334 445 LEALESILMEGFGQNAADHAGPLVVCGLPGE--KVRLCLFTTFP----TSISEVNDILKNSKTSSILKISYHHQVESIPM 518 (539)
T ss_pred HHHHHHHHHHccCCccccccCceEEEcCCCC--ceEEEEEEecc----CChHHHHHHHHhcCCcccccchheeeeccccc
Confidence 9999999999999987 677766543 23444555432 3567899999886 789999999999999999
Q ss_pred CCCCccchHHHHHHHhh
Q 011116 471 STAGKILRRELVTHAIS 487 (493)
Q Consensus 471 t~~GK~~r~~l~~~~~~ 487 (493)
|++||++|+.|++.+..
T Consensus 519 t~~GKi~r~~L~~~~~~ 535 (539)
T PRK06334 519 LGTGKPDYCSLNALAKS 535 (539)
T ss_pred ccCCcccHHHHHHHHHH
Confidence 99999999999998653
No 18
>TIGR01217 ac_ac_CoA_syn acetoacetyl-CoA synthase. This enzyme catalyzes the first step of the mevalonate pathway of IPP biosynthesis. Most bacteria do not use this pathway, but rather the deoxyxylulose pathway.
Probab=100.00 E-value=1e-64 Score=529.29 Aligned_cols=456 Identities=18% Similarity=0.191 Sum_probs=365.8
Q ss_pred hHHHHHHhhCCCCCCCEEEEECCCCCCcHHHHHHHHHHcCCeeccCCCCCCHHHHHHHHhhcCCeEEEEcCCCccc----
Q 011116 18 TLSHALSKRDSLCRKTTSLTSSPLPPSTSPVLYFSLLSLGVVISPANPLSSTSEVSHQIQLSKPSIAFATSHTSYK---- 93 (493)
Q Consensus 18 ~lA~~L~~~~gl~~gd~V~l~~~~~~~~~~~~~lA~~~~G~~~v~i~~~~~~~~l~~~l~~~~~~~il~~~~~~~~---- 93 (493)
++|++| ++.|+++||+|+++++ |++++++++|||+++|++++|+++.++.+++.+++++++++++|+++.....
T Consensus 126 ~lA~~L-~~~Gv~~GdrV~i~~~-n~~e~~~~~lA~~~~Gav~vp~~~~~~~~~l~~~l~~~~~k~li~~~~~~~~~k~~ 203 (652)
T TIGR01217 126 SLAAAL-RALGVRPGDRVSGYLP-NIPQAVVAMLATASVGAIWSSCSPDFGARGVLDRFQQIEPKLLFTVDGYRYNGKEH 203 (652)
T ss_pred HHHHHH-HHcCCCCCCEEEEEcC-CCHHHHHHHHHHHHhCeEEEecCCCCCHHHHHHHHHhcCCcEEEEccccccCCccc
Confidence 349999 7789999999999999 9999999999999999999999999999999999999999999998754210
Q ss_pred ------------CCCCCcEEEecC--------------chhhhhhccCcccccccCCCCCCCCCCeEEEEccCCCCCCcc
Q 011116 94 ------------LPSNLRTILMDS--------------PEFISLLNQNEDVADFANSNMTVYQSDPAAILYSSGTTGKVK 147 (493)
Q Consensus 94 ------------~~~~~~~~~~~~--------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~TSGTTG~pK 147 (493)
++....++.++. ..|.++..... ...........+++++|+|||||||.||
T Consensus 204 ~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~d~~~ilyTSGTTG~PK 280 (652)
T TIGR01217 204 DRRDKVAEVRKELPTLRAVVHIPYLGPRETEAPKIDGALDLEDFTAAAQ---AAELVFEQLPFDHPLWILFSSGTTGLPK 280 (652)
T ss_pred chHHHHHHHHhcCCCccEEEEEeCCCCcccccccccCcccHHHHHhccc---CCCCCceecCCCCCEEEEEcCCCCCCCC
Confidence 111111332221 12333322210 1011122345689999999999999999
Q ss_pred ceecchHHHHHHHH-HhhhhcccCCCCCCCCCCcEEEEecChhHHHHHHHHHHHHhcCCeEEEecC----CCHHHHHHHH
Q 011116 148 GVLLSHLNVIAIIA-GYYHVTEETDPNEGPPPHPVSFFTLPMFHVFGFFMLVRAASKGETLVFMER----FDFEKMLKAV 222 (493)
Q Consensus 148 ~v~~t~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~pl~~~~g~~~~~~~l~~G~~~~~~~~----~~~~~~~~~l 222 (493)
||+++|.+++.... .....+ ++.++|++++..|++|+... .++.++..|+++++.+. .++..+++++
T Consensus 281 gV~~sh~~~~~~~~~~~~~~~-------~~~~~d~~~~~~~~~~~~~~-~~~~~l~~G~t~vl~~g~~~~~~~~~~~~~i 352 (652)
T TIGR01217 281 CIVHSAGGTLVQHLKEHGLHC-------DLGPGDRLFYYTTTGWMMWN-WLVSGLATGATLVLYDGSPGFPATNVLWDIA 352 (652)
T ss_pred eEEecccHHHHHHHHHHHhcc-------CCCCCcEEEEeCCcchhhhH-HHHHHHhcCcEEEEECCCCCCCCchHHHHHH
Confidence 99999998764333 222233 35789999999999998643 35589999999999853 2688999999
Q ss_pred HhcCeeecccChHHHHHHHhcc--cCCCCCCCCeeEEEecCCCCCHHHHHHHHHhCC-CCceeccccccccCCccccccC
Q 011116 223 ENYRVTYMPVSPPLIVAFINSK--LTDKYDLSSLQLLGCGGAPLGKEVTLKFKEKFP-NVEIRQGYGLTETGGAGSRVIG 299 (493)
Q Consensus 223 ~~~~~t~l~~~P~~~~~l~~~~--~~~~~~l~~lr~v~~~Ge~~~~~~~~~~~~~~~-~~~v~~~yG~tE~g~~~~~~~~ 299 (493)
+++++|++...|.+++.+.... .....++++||.+++|||++++++.+++.+.++ +..+.+.||+||++...... .
T Consensus 353 ~~~~vt~~~~~p~~~~~l~~~~~~~~~~~~l~sLr~i~~gGe~l~~~~~~~~~~~~~~~~~~~~~yG~TE~~~~~~~~-~ 431 (652)
T TIGR01217 353 ERTGATLFGTSAKYVMACRKAGVHPARTHDLSALQCVASTGSPLPPDGFRWVYDEIKADVWLASISGGTDICSCFAGA-N 431 (652)
T ss_pred HHhCCeEEecCHHHHHHHHhcCCCccccCChhheeEEEeecCCCCHHHHHHHHHHhCCCceEEeccCHHHHhccccCC-C
Confidence 9999999988787776665432 123456889999999999999999999999883 35677899999975333221 1
Q ss_pred CCCCCCCCccccccCCceEEEEcCCCCccCCCCCceEEEEeCc--cccccccCCccccc--cc-cc-CCCeeeccceEEE
Q 011116 300 PDEAERHGSVGRLAELMEAKIVDPATGEALPPGQKGELWLRGP--TIMKGYVGDDKATS--ET-VH-SEGWLKTGDLCYF 373 (493)
Q Consensus 300 ~~~~~~~~~~g~p~~~~~~~i~d~~~~~~~~~g~~Gel~v~~~--~~~~gy~~~~~~~~--~~-~~-~~~~~~TgD~~~~ 373 (493)
.......+++|.|.+|++++|+| ++++++ +|+.|||+++|| .++.||+++++.+. .. +. .+|||+|||+|++
T Consensus 432 ~~~~~~~g~~g~p~~g~~v~ivd-~~g~~~-~g~~GEl~v~gp~p~~~~gy~~~~~~t~~~~~~~~~~~g~~~tGDlg~~ 509 (652)
T TIGR01217 432 PTLPVHIGEIQAPGLGTAVQSWD-PEGKPV-TGEVGELVCTNPMPSMPIRFWNDPDGSKYRDAYFDTYPGVWRHGDWITL 509 (652)
T ss_pred CCCCCcCCccCCCcCCCceEEEC-CCCCCC-CCCccEEEEecCCCccccceeCCCccchhHHhhhcCCCCEEEcCCcEEE
Confidence 22223456789999999999999 667777 599999999996 58899999987554 22 21 2689999999999
Q ss_pred cCCCcEEEEcccCCeEEeCceeeChHHHHHHHhcCCCcceEEEEeeeCCCCCeeEEEEEEeCCCCCCCH---HHHHHHHH
Q 011116 374 DSNGFLFIVDRLKELIKYKAYQVPPVELEHLLHSNPEIADAAVIPYPDEEAGQIPMAFVVRKPGSNITE---AEIMDFIA 450 (493)
Q Consensus 374 ~~~g~~~~~GR~~d~i~~~G~~i~~~~ie~~l~~~~~v~~~~v~~~~~~~~~~~~~~~v~~~~~~~~~~---~~l~~~l~ 450 (493)
|+||++++.||+||+||.+|++|+|.+||++|.+||+|.+++|++.+++..++.++++|++.++...++ ++++++++
T Consensus 510 d~dG~l~i~GR~dd~I~~~G~ri~p~EIE~~l~~~p~V~eaavvg~~~~~~ge~~~afVv~~~~~~~~~~~~~~l~~~~~ 589 (652)
T TIGR01217 510 TPRGGIVIHGRSDSTLNPQGVRMGSAEIYNAVERLDEVRESLCIGQEQPDGGYRVVLFVHLAPGATLDDALLDRIKRTIR 589 (652)
T ss_pred CCCCcEEEEecccCeEecCCEEcCHHHHHHHHHhCCCcceEEEEeeecCCCCEEEEEEEEECCCCCCCHHHHHHHHHHHH
Confidence 999999999999999999999999999999999999999999999999988999999999988765554 58999999
Q ss_pred hcCCCCCCcceEEEeccccCCCCCccchHHHHHHHhhCC
Q 011116 451 KQVAPYKKIRRVAFINSIPKSTAGKILRRELVTHAISGN 489 (493)
Q Consensus 451 ~~l~~~~~p~~~~~~~~lP~t~~GK~~r~~l~~~~~~~~ 489 (493)
++|+++++|+.|+++++||+|++||++|+.||+.+...+
T Consensus 590 ~~l~~~~~P~~i~~v~~lP~T~sGKi~r~~Lr~~~~~~~ 628 (652)
T TIGR01217 590 AGLSPRHVPDEIIEVPGIPHTLTGKRVEVAVKRVLQGTP 628 (652)
T ss_pred hhCCCCcCCCEEEECCCCCCCCCccChHHHHHHHHcCCC
Confidence 999999999999999999999999999999999986544
No 19
>PLN02330 4-coumarate--CoA ligase-like 1
Probab=100.00 E-value=2.2e-64 Score=519.23 Aligned_cols=465 Identities=35% Similarity=0.604 Sum_probs=392.6
Q ss_pred hHHHHHHhhCCCCCCCEEEEECCCCCCcHHHHHHHHHHcCCeeccCCCCCCHHHHHHHHhhcCCeEEEEcCCCcccCCC-
Q 011116 18 TLSHALSKRDSLCRKTTSLTSSPLPPSTSPVLYFSLLSLGVVISPANPLSSTSEVSHQIQLSKPSIAFATSHTSYKLPS- 96 (493)
Q Consensus 18 ~lA~~L~~~~gl~~gd~V~l~~~~~~~~~~~~~lA~~~~G~~~v~i~~~~~~~~l~~~l~~~~~~~il~~~~~~~~~~~- 96 (493)
++|..| .+.|+++||+|+++++ |+++++++++||+++|++++|+++..+.+++.++++.++++++++++.....+..
T Consensus 67 ~la~~L-~~~g~~~g~~V~i~~~-~~~~~~~~~lA~~~~G~~~vpl~~~~~~~~l~~~l~~~~~~~~i~~~~~~~~~~~~ 144 (546)
T PLN02330 67 RFAKAL-RSLGLRKGQVVVVVLP-NVAEYGIVALGIMAAGGVFSGANPTALESEIKKQAEAAGAKLIVTNDTNYGKVKGL 144 (546)
T ss_pred HHHHHH-HHhCCCCCCEEEEECC-CchHHHHHHHHHHHhCcEeccCCccCCHHHHHHHHHhcCCeEEEEccchhhhHhhc
Confidence 459999 7789999999999999 9999999999999999999999999999999999999999999999876665543
Q ss_pred CCcEEEecC------chhhhhhccCcccccccCCCCCCCCCCeEEEEccCCCCCCccceecchHHHHHHHHHhhhhcccC
Q 011116 97 NLRTILMDS------PEFISLLNQNEDVADFANSNMTVYQSDPAAILYSSGTTGKVKGVLLSHLNVIAIIAGYYHVTEET 170 (493)
Q Consensus 97 ~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~TSGTTG~pK~v~~t~~~~~~~~~~~~~~~~~~ 170 (493)
...++.++. ..|.+++...... ...........+++++++|||||||.||+|.++|.++..+..........
T Consensus 145 ~~~~i~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~a~il~TSGTTG~PKgv~~s~~~l~~~~~~~~~~~~~- 222 (546)
T PLN02330 145 GLPVIVLGEEKIEGAVNWKELLEAADRA-GDTSDNEEILQTDLCALPFSSGTTGISKGVMLTHRNLVANLCSSLFSVGP- 222 (546)
T ss_pred CCcEEEecCCCCCCcccHHHHHhhcccc-CcccccccCCcccEEEEEeCCCCcCCCcEEEEehHHHHHHHHHHhhccCc-
Confidence 233444332 2355444332110 00111233456899999999999999999999999998765432211110
Q ss_pred CCCCCCCCCcEEEEecChhHHHHH-HHHHHHHhcCCeEEEecCCCHHHHHHHHHhcCeeecccChHHHHHHHhcccCCCC
Q 011116 171 DPNEGPPPHPVSFFTLPMFHVFGF-FMLVRAASKGETLVFMERFDFEKMLKAVENYRVTYMPVSPPLIVAFINSKLTDKY 249 (493)
Q Consensus 171 ~~~~~~~~~~~~~~~~pl~~~~g~-~~~~~~l~~G~~~~~~~~~~~~~~~~~l~~~~~t~l~~~P~~~~~l~~~~~~~~~ 249 (493)
+....+..+...|++|.+++ ..++.++..|+++++.+.+++..+++.++++++|++.++|+++..+++.......
T Consensus 223 ----~~~~~~~~~~~~p~~h~~g~~~~~~~~l~~g~~~~~~~~~~~~~~~~~i~~~~vt~~~~~P~~~~~l~~~~~~~~~ 298 (546)
T PLN02330 223 ----EMIGQVVTLGLIPFFHIYGITGICCATLRNKGKVVVMSRFELRTFLNALITQEVSFAPIVPPIILNLVKNPIVEEF 298 (546)
T ss_pred ----cccCceEEEEecChHHHHHHHHHHHHHhhcCCEEEEecccCHHHHHHHHHHcCCeeeecCCHHHHHHHhCcccccc
Confidence 11345678999999999988 4677889999999999889999999999999999999999999999886544333
Q ss_pred CCC--CeeEEEecCCCCCHHHHHHHHHhCCCCceeccccccccCCccccccCCCC---CCCCCccccccCCceEEEEcCC
Q 011116 250 DLS--SLQLLGCGGAPLGKEVTLKFKEKFPNVEIRQGYGLTETGGAGSRVIGPDE---AERHGSVGRLAELMEAKIVDPA 324 (493)
Q Consensus 250 ~l~--~lr~v~~~Ge~~~~~~~~~~~~~~~~~~v~~~yG~tE~g~~~~~~~~~~~---~~~~~~~g~p~~~~~~~i~d~~ 324 (493)
.+. ++|.++++|+++++++.+++.+.|+++++++.||+||++.+...+..... .....++|+|+++++++++|++
T Consensus 299 ~~~~~~l~~i~~~g~~l~~~~~~~~~~~~~~~~~~~~YG~tE~~~~~~~~~~~~~~~~~~~~~~vG~~~~~~~v~i~d~~ 378 (546)
T PLN02330 299 DLSKLKLQAIMTAAAPLAPELLTAFEAKFPGVQVQEAYGLTEHSCITLTHGDPEKGHGIAKKNSVGFILPNLEVKFIDPD 378 (546)
T ss_pred ccchheeeeEEEcCCcCCHHHHHHHHHHcCCCeEEecccccccccceecCCCccccccccccCccccccCCcEEEEEeCC
Confidence 343 47899999999999999999999988999999999999866543222211 1234679999999999999988
Q ss_pred CCccCCCCCceEEEEeCccccccccCCcccccccccCCCeeeccceEEEcCCCcEEEEcccCCeEEeCceeeChHHHHHH
Q 011116 325 TGEALPPGQKGELWLRGPTIMKGYVGDDKATSETVHSEGWLKTGDLCYFDSNGFLFIVDRLKELIKYKAYQVPPVELEHL 404 (493)
Q Consensus 325 ~~~~~~~g~~Gel~v~~~~~~~gy~~~~~~~~~~~~~~~~~~TgD~~~~~~~g~~~~~GR~~d~i~~~G~~i~~~~ie~~ 404 (493)
++++++.|+.|||+++|+.++.||+++++.+.+.++.+|||+|||++++++||.+++.||.+|+|+++|++|++.+||++
T Consensus 379 ~~~~~p~g~~Gel~v~g~~~~~gy~~~~~~~~~~~~~~g~~~TGD~~~~~~dG~l~~~GR~~d~i~~~G~~v~~~~iE~~ 458 (546)
T PLN02330 379 TGRSLPKNTPGELCVRSQCVMQGYYNNKEETDRTIDEDGWLHTGDIGYIDDDGDIFIVDRIKELIKYKGFQVAPAELEAI 458 (546)
T ss_pred CCccCCCCCceEEEEecchhhhhhccCccchhhhccCCCceecccEEEEeCCCcEEEEechHHhhhcCCEEECHHHHHHH
Confidence 89999999999999999999999999999998888888999999999999999999999999999999999999999999
Q ss_pred HhcCCCcceEEEEeeeCCCCCeeEEEEEEeCCCCCCCHHHHHHHHHhcCCCCCCcceEEEeccccCCCCCccchHHHHHH
Q 011116 405 LHSNPEIADAAVIPYPDEEAGQIPMAFVVRKPGSNITEAEIMDFIAKQVAPYKKIRRVAFINSIPKSTAGKILRRELVTH 484 (493)
Q Consensus 405 l~~~~~v~~~~v~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~l~~~l~~~~~p~~~~~~~~lP~t~~GK~~r~~l~~~ 484 (493)
|.+++.|.+++|++.+++..++.+.+++++.++...+.+++++++++++++++.|+.+.+++++|+|.+||++|+.|+++
T Consensus 459 l~~~~~v~~~~v~~~~~~~~g~~~~a~v~~~~~~~~~~~~l~~~~~~~l~~~~~p~~~~~v~~iP~t~~GK~~r~~L~~~ 538 (546)
T PLN02330 459 LLTHPSVEDAAVVPLPDEEAGEIPAACVVINPKAKESEEDILNFVAANVAHYKKVRVVQFVDSIPKSLSGKIMRRLLKEK 538 (546)
T ss_pred HHhCCchheEEEEeccccccCceeEEEEEECCCCCCCHHHHHHHHHHhcccccCceEEEEeccCCCCCCcceeHHHHHHH
Confidence 99999999999999988888888999999887766778899999999999999999999999999999999999999999
Q ss_pred HhhCCC
Q 011116 485 AISGNL 490 (493)
Q Consensus 485 ~~~~~~ 490 (493)
+.+.+.
T Consensus 539 ~~~~~~ 544 (546)
T PLN02330 539 MLSINK 544 (546)
T ss_pred HHhhhc
Confidence 987654
No 20
>COG1021 EntE Peptide arylation enzymes [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=100.00 E-value=1.2e-66 Score=467.49 Aligned_cols=457 Identities=25% Similarity=0.350 Sum_probs=401.5
Q ss_pred HHHHHHhhCCCCCCCEEEEECCCCCCcHHHHHHHHHHcCCeeccCCCCCCHHHHHHHHhhcCCeEEEEcCCCccc-----
Q 011116 19 LSHALSKRDSLCRKTTSLTSSPLPPSTSPVLYFSLLSLGVVISPANPLSSTSEVSHQIQLSKPSIAFATSHTSYK----- 93 (493)
Q Consensus 19 lA~~L~~~~gl~~gd~V~l~~~~~~~~~~~~~lA~~~~G~~~v~i~~~~~~~~l~~~l~~~~~~~il~~~~~~~~----- 93 (493)
||..| +++||++||+|.+.+| |..+|++++||++++|+.+|.-=|+....+|....+.+.++.+|.+.....-
T Consensus 66 LAa~l-~~lGi~~Gd~vlvQLp-N~~ef~~~~FALlrlGv~PVlALpsHr~~Ei~~f~~~~e~~~~i~~~~~~gFd~~~~ 143 (542)
T COG1021 66 LAAGL-RRLGIKPGDTVLVQLP-NVAEFYITFFALLRLGVAPVLALPSHRASELGAFASQIEAALLIVARQHSGFDYRPF 143 (542)
T ss_pred HHHHH-HhcCCCCCCEEEEECC-chHHHHHHHHHHHHcCcchhhccchhhHHHHHHHHHhhcchheeechhhcccCcHHH
Confidence 59999 8899999999999999 9999999999999999999988888899999999999999999988632221
Q ss_pred CC----C--CCcEEEecCch--hhhhhccCcccccccCCCCCCCCCCeEEEEccCCCCCCccceecchHHHHHHHHHhhh
Q 011116 94 LP----S--NLRTILMDSPE--FISLLNQNEDVADFANSNMTVYQSDPAAILYSSGTTGKVKGVLLSHLNVIAIIAGYYH 165 (493)
Q Consensus 94 ~~----~--~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~TSGTTG~pK~v~~t~~~~~~~~~~~~~ 165 (493)
.+ + .++.+.+.++. ...+............+..+.++++++++..+.||||.||.|+++|.++..++....+
T Consensus 144 ar~~~a~~~tlr~v~v~ge~~~~~~~~~~~~~~a~~~~~a~~~~~~~vA~fqLSGGTTGtPKLIPRtH~DY~Ysv~aSaE 223 (542)
T COG1021 144 ARELVAKHPTLRHVIVAGEAEHPSVLEAALCHPAGLFTPAPPADAGEVAFFQLSGGTTGTPKLIPRTHNDYYYSVRASAE 223 (542)
T ss_pred HHHHHhhCCcceEEEEccCCCCcchhhhhhhCccccCCcCCCCCCCceEEEEecCCCCCCCccccccccceeeeeeehhh
Confidence 11 1 34555554322 1111111111112234456778899999999999999999999999999999999888
Q ss_pred hcccCCCCCCCCCCcEEEEecChhHHHHH--HHHHHHHhcCCeEEEecCCCHHHHHHHHHhcCeeecccChHHHHHHHhc
Q 011116 166 VTEETDPNEGPPPHPVSFFTLPMFHVFGF--FMLVRAASKGETLVFMERFDFEKMLKAVENYRVTYMPVSPPLIVAFINS 243 (493)
Q Consensus 166 ~~~~~~~~~~~~~~~~~~~~~pl~~~~g~--~~~~~~l~~G~~~~~~~~~~~~~~~~~l~~~~~t~l~~~P~~~~~l~~~ 243 (493)
.++ +.+.+++++.+|..|.+.+ -..++.+++|+++|+.+..+++..+.+|+++++|+...+|.....|++.
T Consensus 224 iC~-------~~~~tvyL~~LP~AHNfplssPG~LGv~~agG~VVla~~psp~~~F~lIerh~Vt~tALVPpla~LWlqa 296 (542)
T COG1021 224 ICG-------FDQQTVYLCALPAAHNFPLSSPGALGVFLAGGTVVLAPDPSPELCFPLIERHGVTVTALVPPLASLWLQA 296 (542)
T ss_pred hhC-------cCccceEEEecccccCCCCCCcchhheeeeccEEEECCCCCHHHHHHHHHHhccceEEeccHHHHHHHHh
Confidence 884 4899999999999999988 5799999999999999988999999999999999999999999999999
Q ss_pred ccCCCCCCCCeeEEEecCCCCCHHHHHHHHHhCCCCceeccccccccCCccccccCCCCCCCCCcccccc-CCceEEEEc
Q 011116 244 KLTDKYDLSSLQLLGCGGAPLGKEVTLKFKEKFPNVEIRQGYGLTETGGAGSRVIGPDEAERHGSVGRLA-ELMEAKIVD 322 (493)
Q Consensus 244 ~~~~~~~l~~lr~v~~~Ge~~~~~~~~~~~~~~~~~~v~~~yG~tE~g~~~~~~~~~~~~~~~~~~g~p~-~~~~~~i~d 322 (493)
.+....++++||.+-+||..+++++.+++...+ +|.+-+.|||.|.-...+.... +...-..+-|+|+ |.-+++|+|
T Consensus 297 ~e~~~~~LsSLrllQVGGarl~~~~Arrv~~~l-gC~LQQVFGMAEGLvnyTRLDD-p~E~i~~TQGrPlsP~DEvrvvD 374 (542)
T COG1021 297 AEWERADLSSLRLLQVGGARLSATLARRVPAVL-GCQLQQVFGMAEGLVNYTRLDD-PPEIIIHTQGRPLSPDDEVRVVD 374 (542)
T ss_pred hhcccCCchheeEEeecCcccCHHHHhhchhhh-CchHHHHhhhhhhhhcccccCC-chHheeecCCCcCCCcceeEEec
Confidence 988889999999999999999999999999999 9999999999998654444222 2233456789998 788999999
Q ss_pred CCCCccCCCCCceEEEEeCccccccccCCcccccccccCCCeeeccceEEEcCCCcEEEEcccCCeEEeCceeeChHHHH
Q 011116 323 PATGEALPPGQKGELWLRGPTIMKGYVGDDKATSETVHSEGWLKTGDLCYFDSNGFLFIVDRLKELIKYKAYQVPPVELE 402 (493)
Q Consensus 323 ~~~~~~~~~g~~Gel~v~~~~~~~gy~~~~~~~~~~~~~~~~~~TgD~~~~~~~g~~~~~GR~~d~i~~~G~~i~~~~ie 402 (493)
++|+++++|+.|+|..+||...+|||+.|+.+...|+.+|||+|||++++++||++.+.||.+|+|+.+|++|..+|||
T Consensus 375 -~dg~pv~pGE~G~LltRGPYTirGYyrap~HNa~aF~a~GFYrsGD~V~~~~dGyl~V~GR~KDQINRgGEKIAAeEvE 453 (542)
T COG1021 375 -ADGNPVAPGEVGELLTRGPYTIRGYYRAPEHNARAFDADGFYRSGDLVRRDPDGYLVVEGRVKDQINRGGEKIAAEEVE 453 (542)
T ss_pred -CCCCCCCCCCcceeeecCCeeeeeeccCchhhhhccCcCCceecCceeEecCCceEEEEeeehhhhccccchhhHHHHH
Confidence 8899999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHhcCCCcceEEEEeeeCCCCCeeEEEEEEeCCCCCCCHHHHHHHHHhc-CCCCCCcceEEEeccccCCCCCccchHHH
Q 011116 403 HLLHSNPEIADAAVIPYPDEEAGQIPMAFVVRKPGSNITEAEIMDFIAKQ-VAPYKKIRRVAFINSIPKSTAGKILRREL 481 (493)
Q Consensus 403 ~~l~~~~~v~~~~v~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~l~~~-l~~~~~p~~~~~~~~lP~t~~GK~~r~~l 481 (493)
+.|..||.|.++++++.+++..||..++|++..+. .....+++..+.+. +..|++|++|.+++.+|+|+-|||+++.|
T Consensus 454 n~LL~HP~V~~AAlVampDelLGEksCAfiv~~~~-~~~~~qlr~~L~~~GlAa~K~PDrie~v~~~P~T~VGKIdKk~L 532 (542)
T COG1021 454 NLLLRHPAVHDAALVAMPDELLGEKSCAFIVVKEP-PLRAAQLRRFLRERGLAAFKLPDRIEFVDSLPLTAVGKIDKKAL 532 (542)
T ss_pred HHHhhCchhhhhhhhcCchhhcCcceeEEEEecCC-CCCHHHHHHHHHHcchhhhcCCcceeecccCCCcccccccHHHH
Confidence 99999999999999999999999999999999765 37788999999764 89999999999999999999999999999
Q ss_pred HHHHhhC
Q 011116 482 VTHAISG 488 (493)
Q Consensus 482 ~~~~~~~ 488 (493)
|+.+...
T Consensus 533 r~~l~~~ 539 (542)
T COG1021 533 RRRLASR 539 (542)
T ss_pred HHHhhhh
Confidence 9988654
No 21
>PRK06839 acyl-CoA synthetase; Validated
Probab=100.00 E-value=1.3e-64 Score=515.89 Aligned_cols=453 Identities=27% Similarity=0.416 Sum_probs=389.6
Q ss_pred cchhhhHHHHHHhhCCCCCCCEEEEECCCCCCcHHHHHHHHHHcCCeeccCCCCCCHHHHHHHHhhcCCeEEEEcCCCcc
Q 011116 13 SSARFTLSHALSKRDSLCRKTTSLTSSPLPPSTSPVLYFSLLSLGVVISPANPLSSTSEVSHQIQLSKPSIAFATSHTSY 92 (493)
Q Consensus 13 ~~~~~~lA~~L~~~~gl~~gd~V~l~~~~~~~~~~~~~lA~~~~G~~~v~i~~~~~~~~l~~~l~~~~~~~il~~~~~~~ 92 (493)
+++++ |++|+.+.|+++||+|+++++ |+++++++++||+++|++++|+++..+.+++..+++.++++.++++++...
T Consensus 36 ~~~~l--a~~L~~~~g~~~~~~V~i~~~-~~~~~~~~~la~~~~G~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~~~~~~ 112 (496)
T PRK06839 36 YVSKV--AAYLIYELNVKKGERIAILSQ-NSLEYIVLLFAIAKVECIAVPLNIRLTENELIFQLKDSGTTVLFVEKTFQN 112 (496)
T ss_pred HHHHH--HHHHHHhcCCCCCCEEEEECC-CCHHHHHHHHHHHhcCcEEEecCcccCHHHHHHHHHhcCceEEEEcHHHHH
Confidence 34444 999955579999999999999 999999999999999999999999999999999999999999999876544
Q ss_pred cCCC------CCcEEEecCchhhhhhccCcccccccCCCCCCCCCCeEEEEccCCCCCCccceecchHHHHHHHHHhhhh
Q 011116 93 KLPS------NLRTILMDSPEFISLLNQNEDVADFANSNMTVYQSDPAAILYSSGTTGKVKGVLLSHLNVIAIIAGYYHV 166 (493)
Q Consensus 93 ~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~TSGTTG~pK~v~~t~~~~~~~~~~~~~~ 166 (493)
.+.+ ....+.+.+ +....... .........+++++++|||||||.||+|.++|.++..........
T Consensus 113 ~~~~~~~~~~~~~~~~~~~--~~~~~~~~------~~~~~~~~~~~~~~i~~TSGTTG~PK~v~~s~~~l~~~~~~~~~~ 184 (496)
T PRK06839 113 MALSMQKVSYVQRVISITS--LKEIEDRK------IDNFVEKNESASFIICYTSGTTGKPKGAVLTQENMFWNALNNTFA 184 (496)
T ss_pred HHHHhhhccCcceEEEecc--hHhhhccC------CCCCCCCCCCCcEEEEeCCCCCCCCcEEEEEhHHHHHHHHHHHHH
Confidence 3221 112233322 22222221 111223456899999999999999999999999987665555444
Q ss_pred cccCCCCCCCCCCcEEEEecChhHHHHH-HHHHHHHhcCCeEEEecCCCHHHHHHHHHhcCeeecccChHHHHHHHhccc
Q 011116 167 TEETDPNEGPPPHPVSFFTLPMFHVFGF-FMLVRAASKGETLVFMERFDFEKMLKAVENYRVTYMPVSPPLIVAFINSKL 245 (493)
Q Consensus 167 ~~~~~~~~~~~~~~~~~~~~pl~~~~g~-~~~~~~l~~G~~~~~~~~~~~~~~~~~l~~~~~t~l~~~P~~~~~l~~~~~ 245 (493)
+ +..+++++++.+|++|..++ ...+.++..|+++++.+..+++++++.++++++|++.++|++++.+++...
T Consensus 185 ~-------~~~~~d~~l~~~p~~~~~g~~~~~~~~l~~g~~~~~~~~~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~ 257 (496)
T PRK06839 185 I-------DLTMHDRSIVLLPLFHIGGIGLFAFPTLFAGGVIIVPRKFEPTKALSMIEKHKVTVVMGVPTIHQALINCSK 257 (496)
T ss_pred c-------CCCCCCeEEEeeCCcchhhHHHHHHHHHhcCcEEEEccCCCHHHHHHHHHhhCCeEEEehHHHHHHHHhCcc
Confidence 4 34788999999999999998 456788999999999888899999999999999999999999999998876
Q ss_pred CCCCCCCCeeEEEecCCCCCHHHHHHHHHhCCCCceeccccccccCCccccccCCCCCCCCCccccccCCceEEEEcCCC
Q 011116 246 TDKYDLSSLQLLGCGGAPLGKEVTLKFKEKFPNVEIRQGYGLTETGGAGSRVIGPDEAERHGSVGRLAELMEAKIVDPAT 325 (493)
Q Consensus 246 ~~~~~l~~lr~v~~~Ge~~~~~~~~~~~~~~~~~~v~~~yG~tE~g~~~~~~~~~~~~~~~~~~g~p~~~~~~~i~d~~~ 325 (493)
.....++++|.+++||+++++++.+.+++. ++++++.||+||++..+............+++|+|+++++++|+| ++
T Consensus 258 ~~~~~~~~lr~~~~gG~~~~~~~~~~~~~~--g~~~~~~YG~tE~~~~~~~~~~~~~~~~~~~~G~p~~~~~~~i~d-~~ 334 (496)
T PRK06839 258 FETTNLQSVRWFYNGGAPCPEELMREFIDR--GFLFGQGFGMTETSPTVFMLSEEDARRKVGSIGKPVLFCDYELID-EN 334 (496)
T ss_pred cccCCCcccceEEECCCCCCHHHHHHHHHh--CCeeEeeccCCCCCcceEecccccccccCCCCcccCCCceEEEEC-CC
Confidence 666678899999999999999999999986 899999999999987554432222334567899999999999999 45
Q ss_pred CccCCCCCceEEEEeCccccccccCCcccccccccCCCeeeccceEEEcCCCcEEEEcccCCeEEeCceeeChHHHHHHH
Q 011116 326 GEALPPGQKGELWLRGPTIMKGYVGDDKATSETVHSEGWLKTGDLCYFDSNGFLFIVDRLKELIKYKAYQVPPVELEHLL 405 (493)
Q Consensus 326 ~~~~~~g~~Gel~v~~~~~~~gy~~~~~~~~~~~~~~~~~~TgD~~~~~~~g~~~~~GR~~d~i~~~G~~i~~~~ie~~l 405 (493)
++.++.|+.|||+++|+.++.||+++++.+...+ .+|||+|||+++++++|.+++.||.+|+|+.+|++|+|.+||++|
T Consensus 335 ~~~~~~g~~Gel~v~~~~~~~gy~~~~~~~~~~~-~~g~~~TGDl~~~~~~g~~~~~GR~~d~i~~~G~~v~p~~iE~~l 413 (496)
T PRK06839 335 KNKVEVGEVGELLIRGPNVMKEYWNRPDATEETI-QDGWLCTGDLARVDEDGFVYIVGRKKEMIISGGENIYPLEVEQVI 413 (496)
T ss_pred cCCCCCCCceEEEEECCCcchhhcCChHHHHHHH-cCCCeeecceEEEcCCCcEEEeccccceEEECCEEECHHHHHHHH
Confidence 6669999999999999999999999999888777 489999999999999999999999999999999999999999999
Q ss_pred hcCCCcceEEEEeeeCCCCCeeEEEEEEeCCCCCCCHHHHHHHHHhcCCCCCCcceEEEeccccCCCCCccchHHHHHHH
Q 011116 406 HSNPEIADAAVIPYPDEEAGQIPMAFVVRKPGSNITEAEIMDFIAKQVAPYKKIRRVAFINSIPKSTAGKILRRELVTHA 485 (493)
Q Consensus 406 ~~~~~v~~~~v~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~l~~~l~~~~~p~~~~~~~~lP~t~~GK~~r~~l~~~~ 485 (493)
.++|+|.++++++.+++..++.+++++++.++...+.++++++++++++++++|..+++++++|+|.+||++|++|+++.
T Consensus 414 ~~~~~v~~~~v~~~~~~~~g~~~~~~v~~~~~~~~~~~~l~~~~~~~l~~~~~P~~~~~v~~~P~t~~GKi~r~~l~~~~ 493 (496)
T PRK06839 414 NKLSDVYEVAVVGRQHVKWGEIPIAFIVKKSSSVLIEKDVIEHCRLFLAKYKIPKEIVFLKELPKNATGKIQKAQLVNQL 493 (496)
T ss_pred HhCCCeeEEEEEeccccccCceEEEEEEECCCCCCCHHHHHHHHHhhCcCCCCCcEEEEeccCCCCccccccHHHHHHHh
Confidence 99999999999999998888999999999887778889999999999999999999999999999999999999999887
Q ss_pred hh
Q 011116 486 IS 487 (493)
Q Consensus 486 ~~ 487 (493)
.+
T Consensus 494 ~~ 495 (496)
T PRK06839 494 KS 495 (496)
T ss_pred hc
Confidence 64
No 22
>PRK03584 acetoacetyl-CoA synthetase; Provisional
Probab=100.00 E-value=3.1e-64 Score=527.94 Aligned_cols=458 Identities=21% Similarity=0.207 Sum_probs=373.5
Q ss_pred hHHHHHHhhCCCCCCCEEEEECCCCCCcHHHHHHHHHHcCCeeccCCCCCCHHHHHHHHhhcCCeEEEEcCCCccc----
Q 011116 18 TLSHALSKRDSLCRKTTSLTSSPLPPSTSPVLYFSLLSLGVVISPANPLSSTSEVSHQIQLSKPSIAFATSHTSYK---- 93 (493)
Q Consensus 18 ~lA~~L~~~~gl~~gd~V~l~~~~~~~~~~~~~lA~~~~G~~~v~i~~~~~~~~l~~~l~~~~~~~il~~~~~~~~---- 93 (493)
++|++| .+.|+++||+|+++++ |++++++++|||+++|++++|+++.++.+++.++++.++++++|+++.....
T Consensus 126 ~lA~~L-~~~Gv~~gd~V~i~~~-n~~e~v~~~lA~~~~Gav~v~l~~~~~~~~l~~~l~~~~~~~li~~~~~~~~~~~~ 203 (655)
T PRK03584 126 ALAAAL-RALGVGPGDRVAAYLP-NIPETVVAMLATASLGAIWSSCSPDFGVQGVLDRFGQIEPKVLIAVDGYRYGGKAF 203 (655)
T ss_pred HHHHHH-HHcCCCCCCEEEEEcC-CCHHHHHHHHHHHHcCcEEEeeCCCCCHHHHHHHHHHcCCcEEEEccccccCCccc
Confidence 359999 7789999999999999 9999999999999999999999999999999999999999999998753211
Q ss_pred ------------CCCCCcEEEecC-------------chhhhhhccCcccccccCCCCCCCCCCeEEEEccCCCCCCccc
Q 011116 94 ------------LPSNLRTILMDS-------------PEFISLLNQNEDVADFANSNMTVYQSDPAAILYSSGTTGKVKG 148 (493)
Q Consensus 94 ------------~~~~~~~~~~~~-------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~TSGTTG~pK~ 148 (493)
++....++.++. ..|.+++.... ...........+++++|+|||||||.|||
T Consensus 204 ~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~a~ilyTSGTTG~PKg 280 (655)
T PRK03584 204 DRRAKVAELRAALPSLEHVVVVPYLGPAAAAAALPGALLWEDFLAPAE---AAELEFEPVPFDHPLWILYSSGTTGLPKC 280 (655)
T ss_pred chHHHHHHHHhcCCCccEEEEEecCCCcccccccCCcccHHHHhhccc---cCCCCceecCCCCcEEEEecCCCCCCCce
Confidence 111112333321 12333332111 11122234567899999999999999999
Q ss_pred eecchHHHHHH-HHHhhhhcccCCCCCCCCCCcEEEEecChhHHHHHHHHHHHHhcCCeEEEecC----CCHHHHHHHHH
Q 011116 149 VLLSHLNVIAI-IAGYYHVTEETDPNEGPPPHPVSFFTLPMFHVFGFFMLVRAASKGETLVFMER----FDFEKMLKAVE 223 (493)
Q Consensus 149 v~~t~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~pl~~~~g~~~~~~~l~~G~~~~~~~~----~~~~~~~~~l~ 223 (493)
|+++|.+++.. .......+ ++.++|++++..++.|+.+. .++.++..|+++++.+. .++..+++.++
T Consensus 281 V~~sh~~~~~~~~~~~~~~~-------~~~~~d~~~~~~~~~~~~~~-~~~~~L~~G~t~vl~~~~~~~~~~~~~~~~i~ 352 (655)
T PRK03584 281 IVHGHGGILLEHLKELGLHC-------DLGPGDRFFWYTTCGWMMWN-WLVSGLLVGATLVLYDGSPFYPDPNVLWDLAA 352 (655)
T ss_pred EEECccHHHHHHHHHHHHhc-------CCCCCCEEEEcCCchHHhHH-HHHHHHHcCCEEEEeCCCCCCCCHHHHHHHHH
Confidence 99999987644 33333333 34788999999999987553 46688999999998753 47899999999
Q ss_pred hcCeeecccChHHHHHHHhccc--CCCCCCCCeeEEEecCCCCCHHHHHHHHHhC-CCCceeccccccccCCccccccCC
Q 011116 224 NYRVTYMPVSPPLIVAFINSKL--TDKYDLSSLQLLGCGGAPLGKEVTLKFKEKF-PNVEIRQGYGLTETGGAGSRVIGP 300 (493)
Q Consensus 224 ~~~~t~l~~~P~~~~~l~~~~~--~~~~~l~~lr~v~~~Ge~~~~~~~~~~~~~~-~~~~v~~~yG~tE~g~~~~~~~~~ 300 (493)
++++|++.++|++++.+.+... ....+++++|.++++||++++++.+++.+.+ +++.+.+.||+||++...... ..
T Consensus 353 ~~~vt~~~~~P~~~~~l~~~~~~~~~~~~l~sLr~i~~~Ge~l~~~~~~~~~~~~~~~~~~~~~yG~TE~~~~~~~~-~~ 431 (655)
T PRK03584 353 EEGVTVFGTSAKYLDACEKAGLVPGETHDLSALRTIGSTGSPLPPEGFDWVYEHVKADVWLASISGGTDICSCFVGG-NP 431 (655)
T ss_pred HHCCEEEEcCHHHHHHHHhcCCCccccCChhheEEEEEecCCCCHHHHHHHHHHhCCCceEEeccChHhhhcccccC-CC
Confidence 9999999999999998876432 2345678999999999999999999999988 468899999999986533321 11
Q ss_pred CCCCCCCccccccCCceEEEEcCCCCccCCCCCceEEEEeCc--cccccccCCccccc--ccc-c-CCCeeeccceEEEc
Q 011116 301 DEAERHGSVGRLAELMEAKIVDPATGEALPPGQKGELWLRGP--TIMKGYVGDDKATS--ETV-H-SEGWLKTGDLCYFD 374 (493)
Q Consensus 301 ~~~~~~~~~g~p~~~~~~~i~d~~~~~~~~~g~~Gel~v~~~--~~~~gy~~~~~~~~--~~~-~-~~~~~~TgD~~~~~ 374 (493)
......+++|.|.+|++++|+| ++++++ .|+.|||+++|+ .++.||+++++.++ ..+ . .++||+|||++++|
T Consensus 432 ~~~~~~g~~g~p~~g~~~~ivd-~~g~~~-~g~~GeL~v~gp~p~~~~gy~~~~~~~~~~~~~~~~~~g~~~TGDl~~~d 509 (655)
T PRK03584 432 LLPVYRGEIQCRGLGMAVEAWD-EDGRPV-VGEVGELVCTKPFPSMPLGFWNDPDGSRYRDAYFDTFPGVWRHGDWIEIT 509 (655)
T ss_pred CCCcCCCccCCCcCCceeEEEC-CCCCCC-CCCceEEEEccCCCCCcceeeCCCccchHHHhhhccCCCEeecCCeEEEC
Confidence 1223457889999999999999 667777 799999999996 78899999987543 111 1 25789999999999
Q ss_pred CCCcEEEEcccCCeEEeCceeeChHHHHHHHhcCCCcceEEEEeeeCCCCCeeEEEEEEeCCCCCCCH---HHHHHHHHh
Q 011116 375 SNGFLFIVDRLKELIKYKAYQVPPVELEHLLHSNPEIADAAVIPYPDEEAGQIPMAFVVRKPGSNITE---AEIMDFIAK 451 (493)
Q Consensus 375 ~~g~~~~~GR~~d~i~~~G~~i~~~~ie~~l~~~~~v~~~~v~~~~~~~~~~~~~~~v~~~~~~~~~~---~~l~~~l~~ 451 (493)
+||++++.||+||+||++|.+|+|.|||.+|.+||+|.+++|++.+++..++.++++|++.++...++ +++++++++
T Consensus 510 ~dG~l~i~GR~dd~Ik~~G~rI~p~EIE~~l~~~p~V~ea~vvg~~~~~~g~~~~a~vv~~~~~~~~~~~~~~l~~~~~~ 589 (655)
T PRK03584 510 EHGGVVIYGRSDATLNRGGVRIGTAEIYRQVEALPEVLDSLVIGQEWPDGDVRMPLFVVLAEGVTLDDALRARIRTTIRT 589 (655)
T ss_pred CCCeEEEEeeccCeeecCcEEECHHHHHHHHHhCCCcceEEEEeeEcCCCCEEEEEEEEECCCCCCcHHHHHHHHHHHHh
Confidence 99999999999999999999999999999999999999999999999888999999999987755553 589999999
Q ss_pred cCCCCCCcceEEEeccccCCCCCccchHHHHHHHhhCCCC
Q 011116 452 QVAPYKKIRRVAFINSIPKSTAGKILRRELVTHAISGNLS 491 (493)
Q Consensus 452 ~l~~~~~p~~~~~~~~lP~t~~GK~~r~~l~~~~~~~~~~ 491 (493)
+|+++++|..|+++++||+|++||++|+.||+.+..++..
T Consensus 590 ~L~~~~~P~~i~~v~~lP~t~sGKi~r~~lr~~~~~~~~~ 629 (655)
T PRK03584 590 NLSPRHVPDKIIAVPDIPRTLSGKKVELPVKKLLHGRPVK 629 (655)
T ss_pred hCCCCcCCCEEEECCCCCCCCCccchHHHHHHHHcCCCCC
Confidence 9999999999999999999999999999999998876554
No 23
>PRK05677 long-chain-fatty-acid--CoA ligase; Validated
Probab=100.00 E-value=3.6e-64 Score=519.12 Aligned_cols=458 Identities=29% Similarity=0.481 Sum_probs=381.1
Q ss_pred hHHHHHHhhCCCCCCCEEEEECCCCCCcHHHHHHHHHHcCCeeccCCCCCCHHHHHHHHhhcCCeEEEEcCCCcccCCC-
Q 011116 18 TLSHALSKRDSLCRKTTSLTSSPLPPSTSPVLYFSLLSLGVVISPANPLSSTSEVSHQIQLSKPSIAFATSHTSYKLPS- 96 (493)
Q Consensus 18 ~lA~~L~~~~gl~~gd~V~l~~~~~~~~~~~~~lA~~~~G~~~v~i~~~~~~~~l~~~l~~~~~~~il~~~~~~~~~~~- 96 (493)
++|++|.+..|+++||+|+++++ |++++++++|||+++|++++|++|.++.+++.+++++++++.++++.+....+.+
T Consensus 61 ~la~~L~~~~gi~~gd~Vai~~~-n~~~~~~~~la~~~~Ga~~v~l~~~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~~~ 139 (562)
T PRK05677 61 AFAAWLQQHTDLKPGDRIAVQLP-NVLQYPVAVFGAMRAGLIVVNTNPLYTAREMEHQFNDSGAKALVCLANMAHLAEKV 139 (562)
T ss_pred HHHHHHHHhcCCCCCCEEEEECC-CCHHHHHHHHHHHHcCeEEeecCCCCCHHHHHHHHhccCceEEEEecchhhhHHHh
Confidence 35999933369999999999999 9999999999999999999999999999999999999999999997654432211
Q ss_pred ----CCcEEEecC-c-------------------------------hhhhhhccCcccccccCCCCCCCCCCeEEEEccC
Q 011116 97 ----NLRTILMDS-P-------------------------------EFISLLNQNEDVADFANSNMTVYQSDPAAILYSS 140 (493)
Q Consensus 97 ----~~~~~~~~~-~-------------------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~TS 140 (493)
..+.+.+.. . .+.+.+.... ..........++++++++|||
T Consensus 140 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~d~a~i~~TS 216 (562)
T PRK05677 140 LPKTGVKHVIVTEVADMLPPLKRLLINAVVKHVKKMVPAYHLPQAVKFNDALAKGA---GQPVTEANPQADDVAVLQYTG 216 (562)
T ss_pred hhccCcceeEEecccccccchhhhhcccchhhccccccccCCcccccHHHHHhcCC---CCCCCCCCCCccCEEEEEeCC
Confidence 111111110 0 0111111100 001112234578999999999
Q ss_pred CCCCCccceecchHHHHHHHHHhhhhcccCCCCCCCC-CCcEEEEecChhHHHHH-HHHHHHHhcCCeEEEe-cCCCHHH
Q 011116 141 GTTGKVKGVLLSHLNVIAIIAGYYHVTEETDPNEGPP-PHPVSFFTLPMFHVFGF-FMLVRAASKGETLVFM-ERFDFEK 217 (493)
Q Consensus 141 GTTG~pK~v~~t~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~pl~~~~g~-~~~~~~l~~G~~~~~~-~~~~~~~ 217 (493)
||||.||+|.++|.++..........+.. ... ..+.+++.+|++|..++ ..++..+..|++.++. +..++..
T Consensus 217 GTTG~PKgv~~s~~~l~~~~~~~~~~~~~-----~~~~~~~~~~~~~pl~h~~~~~~~~~~~~~~g~~~~~~~~~~~~~~ 291 (562)
T PRK05677 217 GTTGVAKGAMLTHRNLVANMLQCRALMGS-----NLNEGCEILIAPLPLYHIYAFTFHCMAMMLIGNHNILISNPRDLPA 291 (562)
T ss_pred CCCCCCcEEEEehhHHHHHHHHHHHHhcc-----CCCCCccEEEEcCcHHHHHHHHHHHHHHHHcCCeEEEecCcccHHH
Confidence 99999999999999998776554444321 112 34688999999999998 4666777888877666 4568999
Q ss_pred HHHHHHhcCeeecccChHHHHHHHhcccCCCCCCCCeeEEEecCCCCCHHHHHHHHHhCCCCceeccccccccCCccccc
Q 011116 218 MLKAVENYRVTYMPVSPPLIVAFINSKLTDKYDLSSLQLLGCGGAPLGKEVTLKFKEKFPNVEIRQGYGLTETGGAGSRV 297 (493)
Q Consensus 218 ~~~~l~~~~~t~l~~~P~~~~~l~~~~~~~~~~l~~lr~v~~~Ge~~~~~~~~~~~~~~~~~~v~~~yG~tE~g~~~~~~ 297 (493)
+++.++++++|++.++|+++..++.........++++|.+++||+++++++.++|++.+ ++++++.||+||++.+....
T Consensus 292 ~~~~i~~~~~t~~~~~p~~~~~l~~~~~~~~~~~~~lr~v~~gG~~~~~~~~~~~~~~~-~~~v~~~YG~tE~~~~~~~~ 370 (562)
T PRK05677 292 MVKELGKWKFSGFVGLNTLFVALCNNEAFRKLDFSALKLTLSGGMALQLATAERWKEVT-GCAICEGYGMTETSPVVSVN 370 (562)
T ss_pred HHHHHHHcCceEEecHHHHHHHHHhCcccccCChhhceEEEEcCccCCHHHHHHHHHHc-CCCeeccCCccccCcceeec
Confidence 99999999999999999999999876544445567899999999999999999999988 89999999999998766542
Q ss_pred cCCCCCCCCCccccccCCceEEEEcCCCCccCCCCCceEEEEeCccccccccCCcccccccccCCCeeeccceEEEcCCC
Q 011116 298 IGPDEAERHGSVGRLAELMEAKIVDPATGEALPPGQKGELWLRGPTIMKGYVGDDKATSETVHSEGWLKTGDLCYFDSNG 377 (493)
Q Consensus 298 ~~~~~~~~~~~~g~p~~~~~~~i~d~~~~~~~~~g~~Gel~v~~~~~~~gy~~~~~~~~~~~~~~~~~~TgD~~~~~~~g 377 (493)
.......+++|.|+++++++|+| ++++.++.|+.|||+++|+.+++||+++++.+.+.|..+|||+|||+++++++|
T Consensus 371 --~~~~~~~~~vG~~~~~~~v~i~d-~~~~~~~~g~~Gel~v~g~~~~~gY~~~~~~t~~~~~~~g~~~TGDlg~~~~~G 447 (562)
T PRK05677 371 --PSQAIQVGTIGIPVPSTLCKVID-DDGNELPLGEVGELCVKGPQVMKGYWQRPEATDEILDSDGWLKTGDIALIQEDG 447 (562)
T ss_pred --CccCCCCCccCccCCCCEEEEEC-CCCCCCCCCCCeEEEEecCccchhhcCCchhhhhccCCCCcccccceEEECCCC
Confidence 22233457899999999999999 568899999999999999999999999999999999888999999999999999
Q ss_pred cEEEEcccCCeEEeCceeeChHHHHHHHhcCCCcceEEEEeeeCCCCCeeEEEEEEeCCCCCCCHHHHHHHHHhcCCCCC
Q 011116 378 FLFIVDRLKELIKYKAYQVPPVELEHLLHSNPEIADAAVIPYPDEEAGQIPMAFVVRKPGSNITEAEIMDFIAKQVAPYK 457 (493)
Q Consensus 378 ~~~~~GR~~d~i~~~G~~i~~~~ie~~l~~~~~v~~~~v~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~l~~~l~~~~ 457 (493)
.+++.||.+|+|+++|.+|+|.+||++|.++++|.+++|++++++..++.+++++++.++...+.+++++++++++++++
T Consensus 448 ~l~i~GR~~d~i~~~G~~i~p~eiE~~l~~~~~v~~~~v~g~~~~~~g~~~~~~v~~~~~~~~~~~~l~~~~~~~l~~~~ 527 (562)
T PRK05677 448 YMRIVDRKKDMILVSGFNVYPNELEDVLAALPGVLQCAAIGVPDEKSGEAIKVFVVVKPGETLTKEQVMEHMRANLTGYK 527 (562)
T ss_pred cEEEEecCcCeEEeCCEEECHHHHHHHHHhCCCccEEEEEeccCccCCceEEEEEEeCCCCCCCHHHHHHHHHHhhhhcc
Confidence 99999999999999999999999999999999999999999998888888999999877767788999999999999999
Q ss_pred CcceEEEeccccCCCCCccchHHHHHHHhhC
Q 011116 458 KIRRVAFINSIPKSTAGKILRRELVTHAISG 488 (493)
Q Consensus 458 ~p~~~~~~~~lP~t~~GK~~r~~l~~~~~~~ 488 (493)
+|..+++++++|+|++||++|+.|++++..+
T Consensus 528 ~P~~i~~v~~iP~t~sGKi~r~~L~~~~~~~ 558 (562)
T PRK05677 528 VPKAVEFRDELPTTNVGKILRRELRDEELKK 558 (562)
T ss_pred CCcEEEEeccCCCCCcccccHHHHHHHHHHh
Confidence 9999999999999999999999999876553
No 24
>PLN02736 long-chain acyl-CoA synthetase
Probab=100.00 E-value=1.4e-65 Score=536.98 Aligned_cols=451 Identities=23% Similarity=0.305 Sum_probs=363.9
Q ss_pred hHHHHHHhhCCCCCCCEEEEECCCCCCcHHHHHHHHHHcCCeeccCCCCCCHHHHHHHHhhcCCeEEEEcCCCcccCCC-
Q 011116 18 TLSHALSKRDSLCRKTTSLTSSPLPPSTSPVLYFSLLSLGVVISPANPLSSTSEVSHQIQLSKPSIAFATSHTSYKLPS- 96 (493)
Q Consensus 18 ~lA~~L~~~~gl~~gd~V~l~~~~~~~~~~~~~lA~~~~G~~~v~i~~~~~~~~l~~~l~~~~~~~il~~~~~~~~~~~- 96 (493)
++|++| .+.|+++||+|+++++ |+++|+++++||+++|++++|+++.++.+++.+++++++++++|++.+....+.+
T Consensus 90 ~lA~~L-~~~Gv~~gd~Vai~~~-n~~e~~~~~lA~~~~G~v~vpl~~~~~~~~l~~il~~~~~~~l~~~~~~~~~~~~~ 167 (651)
T PLN02736 90 AIGSGL-VQHGIPKGACVGLYFI-NRPEWLIVDHACSAYSYVSVPLYDTLGPDAVKFIVNHAEVAAIFCVPQTLNTLLSC 167 (651)
T ss_pred HHHHHH-HHhCCCCCCEEEEEcC-CCHHHHHHHHHHHHcCCeEEEeecCCCHHHHHHHHhccCCCEEEECHHHHHHHHHH
Confidence 359999 7899999999999999 9999999999999999999999999999999999999999999998754432211
Q ss_pred -----CCc-EEEecC----------------chhhhhhccCcccccccCCCCCCCCCCeEEEEccCCCCCCccceecchH
Q 011116 97 -----NLR-TILMDS----------------PEFISLLNQNEDVADFANSNMTVYQSDPAAILYSSGTTGKVKGVLLSHL 154 (493)
Q Consensus 97 -----~~~-~~~~~~----------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~TSGTTG~pK~v~~t~~ 154 (493)
..+ ++.++. ..|.++..... ..........++++++|+|||||||.||||+++|+
T Consensus 168 ~~~~~~l~~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~dd~a~IlyTSGTTG~PKGV~lsh~ 244 (651)
T PLN02736 168 LSEIPSVRLIVVVGGADEPLPSLPSGTGVEIVTYSKLLAQGR---SSPQPFRPPKPEDVATICYTSGTTGTPKGVVLTHG 244 (651)
T ss_pred hhcCCCceEEEEECCCchhhhhhhccCCcEEEEHHHHHHhcc---cCCCCCCCCCccceEEEEEcCCCCCCCcEEEEecH
Confidence 122 222221 11222322211 00111223467999999999999999999999999
Q ss_pred HHHHHHHHhhhhcccCCCCCCCCCCcEEEEecChhHHHHHHHHHHHHhcCCeEEEecCCCHHHHHHHHHhcCeeecccCh
Q 011116 155 NVIAIIAGYYHVTEETDPNEGPPPHPVSFFTLPMFHVFGFFMLVRAASKGETLVFMERFDFEKMLKAVENYRVTYMPVSP 234 (493)
Q Consensus 155 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pl~~~~g~~~~~~~l~~G~~~~~~~~~~~~~~~~~l~~~~~t~l~~~P 234 (493)
++...+......+. ..++|++++.+|++|.+++..++.++..|+++++.+. ++..+++.++++++|+++++|
T Consensus 245 ~l~~~~~~~~~~~~-------~~~~d~~l~~lPl~h~~~~~~~~~~l~~G~~i~~~~~-~~~~~~~~i~~~~~t~~~~vP 316 (651)
T PLN02736 245 NLIANVAGSSLSTK-------FYPSDVHISYLPLAHIYERVNQIVMLHYGVAVGFYQG-DNLKLMDDLAALRPTIFCSVP 316 (651)
T ss_pred HHHHHHHHHHhccC-------CCCCCEEEEeCCHHHHHHHHHHHHHHHcCCEEEEeCC-CHHHHHHHHHHhCCcEEecch
Confidence 99988877766553 4789999999999999999888889999999988764 788999999999999999999
Q ss_pred HHHHHHHhcccC-------------------------CCC----------------CC-CCeeEEEecCCCCCHHHHHHH
Q 011116 235 PLIVAFINSKLT-------------------------DKY----------------DL-SSLQLLGCGGAPLGKEVTLKF 272 (493)
Q Consensus 235 ~~~~~l~~~~~~-------------------------~~~----------------~l-~~lr~v~~~Ge~~~~~~~~~~ 272 (493)
.++..+.+.... ... .+ +++|.+++||+++++++.+++
T Consensus 317 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lg~~lr~~~~gGa~l~~~~~~~~ 396 (651)
T PLN02736 317 RLYNRIYDGITNAVKESGGLKERLFNAAYNAKKQALENGKNPSPMWDRLVFNKIKAKLGGRVRFMSSGASPLSPDVMEFL 396 (651)
T ss_pred HHHHHHHHHHHHHHhcccHHHHHHHHHHHHHHHHHHHcCCCCCchHHHHHHHHHHHHhcCcEEEEEeCCCCCCHHHHHHH
Confidence 999887653210 000 01 479999999999999999999
Q ss_pred HHhCCCCceeccccccccCCccccccCCCCCCCCCccccccCCceEEEEcCCCCcc---CCCCCceEEEEeCcccccccc
Q 011116 273 KEKFPNVEIRQGYGLTETGGAGSRVIGPDEAERHGSVGRLAELMEAKIVDPATGEA---LPPGQKGELWLRGPTIMKGYV 349 (493)
Q Consensus 273 ~~~~~~~~v~~~yG~tE~g~~~~~~~~~~~~~~~~~~g~p~~~~~~~i~d~~~~~~---~~~g~~Gel~v~~~~~~~gy~ 349 (493)
++.+ ++++++.||+||+++..+... ......+++|+|.++++++|+|.+++.. ..++..|||+++||.++.||+
T Consensus 397 ~~~~-g~~~~~~YG~TE~~~~~~~~~--~~~~~~~~vG~p~pg~~v~i~d~~~~~~~~~~~~~~~GEl~vrgp~v~~GY~ 473 (651)
T PLN02736 397 RICF-GGRVLEGYGMTETSCVISGMD--EGDNLSGHVGSPNPACEVKLVDVPEMNYTSEDQPYPRGEICVRGPIIFKGYY 473 (651)
T ss_pred HHHh-CCCeEEEechHHhchheeccC--CCCCCCCccCCccCceEEEEEEccccCcccCCCCCCCceEEecCCccccccc
Confidence 9988 789999999999986554322 2234567899999999999998543322 223457999999999999999
Q ss_pred CCcccccccccCCCeeeccceEEEcCCCcEEEEcccCCeEEe-CceeeChHHHHHHHhcCCCcceEEEEeeeCCCCCeeE
Q 011116 350 GDDKATSETVHSEGWLKTGDLCYFDSNGFLFIVDRLKELIKY-KAYQVPPVELEHLLHSNPEIADAAVIPYPDEEAGQIP 428 (493)
Q Consensus 350 ~~~~~~~~~~~~~~~~~TgD~~~~~~~g~~~~~GR~~d~i~~-~G~~i~~~~ie~~l~~~~~v~~~~v~~~~~~~~~~~~ 428 (493)
++++.+.+.|+.+|||+|||+|++++||++++.||.+|+||+ +|++|+|.+||++|.++|.|.+|+|++. ..++.+
T Consensus 474 ~~~~~t~~~~~~dgw~~TGDlg~~d~dG~l~i~GR~kd~ik~~~G~~V~p~eIE~~l~~~p~V~~a~V~g~---~~~~~~ 550 (651)
T PLN02736 474 KDEVQTREVIDEDGWLHTGDIGLWLPGGRLKIIDRKKNIFKLAQGEYIAPEKIENVYAKCKFVAQCFVYGD---SLNSSL 550 (651)
T ss_pred cCHHHHHhhhccCCCeeccceEEEcCCCcEEEEEechhheEcCCCcEechHHHHHHHhcCCCeeEEEEEec---CCCcee
Confidence 999999999988999999999999999999999999999998 7999999999999999999999999983 356788
Q ss_pred EEEEEeCCC--------CCCCHHHHHHHHH------------------hcCCCCCCcceEEEecccc------CCCCCcc
Q 011116 429 MAFVVRKPG--------SNITEAEIMDFIA------------------KQVAPYKKIRRVAFINSIP------KSTAGKI 476 (493)
Q Consensus 429 ~~~v~~~~~--------~~~~~~~l~~~l~------------------~~l~~~~~p~~~~~~~~lP------~t~~GK~ 476 (493)
+++|++.++ ...+..++.++++ ++|+.+++|++|.++++.| +|++||+
T Consensus 551 ~A~vv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~lT~~~Ki 630 (651)
T PLN02736 551 VAVVVVDPEVLKAWAASEGIKYEDLKQLCNDPRVRAAVLADMDAVGREAQLRGFEFAKAVTLVPEPFTVENGLLTPTFKV 630 (651)
T ss_pred EEEEEeCHHHHHHHHHHcCCCccCHHHHhcCHHHHHHHHHHHHHHHHhcCCCcceeeeEEEEeCCCCcCCCCcCChhhhh
Confidence 999998643 1122222222221 2599999999999998876 7999999
Q ss_pred chHHHHHHHhh
Q 011116 477 LRRELVTHAIS 487 (493)
Q Consensus 477 ~r~~l~~~~~~ 487 (493)
+|+.+++.+.+
T Consensus 631 ~R~~i~~~~~~ 641 (651)
T PLN02736 631 KRPQAKAYFAK 641 (651)
T ss_pred hHHHHHHHHHH
Confidence 99999998764
No 25
>PRK10524 prpE propionyl-CoA synthetase; Provisional
Probab=100.00 E-value=2.5e-64 Score=526.95 Aligned_cols=459 Identities=26% Similarity=0.338 Sum_probs=376.2
Q ss_pred hHHHHHHhhCCCCCCCEEEEECCCCCCcHHHHHHHHHHcCCeeccCCCCCCHHHHHHHHhhcCCeEEEEcCCCccc----
Q 011116 18 TLSHALSKRDSLCRKTTSLTSSPLPPSTSPVLYFSLLSLGVVISPANPLSSTSEVSHQIQLSKPSIAFATSHTSYK---- 93 (493)
Q Consensus 18 ~lA~~L~~~~gl~~gd~V~l~~~~~~~~~~~~~lA~~~~G~~~v~i~~~~~~~~l~~~l~~~~~~~il~~~~~~~~---- 93 (493)
++|++| .+.|+++||+|+++++ |+++++++++||+++|++++|+++.++.+++.+++++++++++|+++.....
T Consensus 96 ~lA~~L-~~~Gv~~gd~V~i~~~-n~~e~~~~~lA~~~~Gav~v~~~~~~~~~~l~~~l~~~~~~~li~~~~~~~~~~~~ 173 (629)
T PRK10524 96 RMAAML-RSLGVQRGDRVLIYMP-MIAEAAFAMLACARIGAIHSVVFGGFASHSLAARIDDAKPVLIVSADAGSRGGKVV 173 (629)
T ss_pred HHHHHH-HHcCCCCCCEEEEECC-CCHHHHHHHHHHHHhCcEEEeeCCCCCHHHHHHHHHhcCCcEEEEccCcccCCccc
Confidence 359999 7789999999999999 9999999999999999999999999999999999999999999997643210
Q ss_pred -----CC--------CCCcEEEecCc------------hhhhhhccCcccccccCCCCCCCCCCeEEEEccCCCCCCccc
Q 011116 94 -----LP--------SNLRTILMDSP------------EFISLLNQNEDVADFANSNMTVYQSDPAAILYSSGTTGKVKG 148 (493)
Q Consensus 94 -----~~--------~~~~~~~~~~~------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~TSGTTG~pK~ 148 (493)
+. ....++.++.. .|..+..... ..........++++++++|||||||.||+
T Consensus 174 ~~~~~~~~~~~~~~~~~~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~d~a~il~TSGTTG~PKg 250 (629)
T PRK10524 174 PYKPLLDEAIALAQHKPRHVLLVDRGLAPMARVAGRDVDYATLRAQHL---GARVPVEWLESNEPSYILYTSGTTGKPKG 250 (629)
T ss_pred ccHHHHHHHHHhcCCCCCEEEEEeCCCCCcCcccCCcccHHHHHhcCC---CCCCCceeeCCCCceEEEeecCCCCCCce
Confidence 00 11223333211 1222221110 00111223457899999999999999999
Q ss_pred eecchHHHHHHHHHhhh-hcccCCCCCCCCCCcEEEEecChhHHHHH-HHHHHHHhcCCeEEEecC----CCHHHHHHHH
Q 011116 149 VLLSHLNVIAIIAGYYH-VTEETDPNEGPPPHPVSFFTLPMFHVFGF-FMLVRAASKGETLVFMER----FDFEKMLKAV 222 (493)
Q Consensus 149 v~~t~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~pl~~~~g~-~~~~~~l~~G~~~~~~~~----~~~~~~~~~l 222 (493)
|.++|.++......... .+ ++.+++++++..|++|..+. +.++.++..|+++++.+. .++..+++.+
T Consensus 251 V~~~~~~~~~~~~~~~~~~~-------~~~~~d~~~~~~~~~~~~~~~~~~~~~l~~G~~~v~~~g~~~~~~~~~~~~~i 323 (629)
T PRK10524 251 VQRDTGGYAVALATSMDTIF-------GGKAGETFFCASDIGWVVGHSYIVYAPLLAGMATIMYEGLPTRPDAGIWWRIV 323 (629)
T ss_pred EEECCcHHHHHHHHHHHHhc-------CCCCCCEEEEcCCCCeeccchHHHHHHHhCCCEEEEECCCCCCCChHHHHHHH
Confidence 99999988655444332 23 34788999999999998886 678899999999998753 4689999999
Q ss_pred HhcCeeecccChHHHHHHHhcccC--CCCCCCCeeEEEecCCCCCHHHHHHHHHhCCCCceeccccccccCCccccccCC
Q 011116 223 ENYRVTYMPVSPPLIVAFINSKLT--DKYDLSSLQLLGCGGAPLGKEVTLKFKEKFPNVEIRQGYGLTETGGAGSRVIGP 300 (493)
Q Consensus 223 ~~~~~t~l~~~P~~~~~l~~~~~~--~~~~l~~lr~v~~~Ge~~~~~~~~~~~~~~~~~~v~~~yG~tE~g~~~~~~~~~ 300 (493)
+++++|++.++|++++.|.+.... ...+++++|.+++|||++++++.+++.+.+ ++++++.||+||++.........
T Consensus 324 ~~~~vt~~~~~P~~~~~l~~~~~~~~~~~~l~~lr~i~~~Ge~l~~~~~~~~~~~~-~~~v~~~YG~TE~~~~~~~~~~~ 402 (629)
T PRK10524 324 EKYKVNRMFSAPTAIRVLKKQDPALLRKHDLSSLRALFLAGEPLDEPTASWISEAL-GVPVIDNYWQTETGWPILAIARG 402 (629)
T ss_pred HHcCceEEEeCHHHHHHHHhcCcccccccChhheeEEEEeCCCCCHHHHHHHHHhc-CCCeEeccccccccchhhcCCCC
Confidence 999999999999999988775432 344678999999999999999999999999 78999999999998433221111
Q ss_pred -C-CCCCCCccccccCCceEEEEcCCCCccCCCCCceEEEEeCc---cccccccCCccccccccc---CCCeeeccceEE
Q 011116 301 -D-EAERHGSVGRLAELMEAKIVDPATGEALPPGQKGELWLRGP---TIMKGYVGDDKATSETVH---SEGWLKTGDLCY 372 (493)
Q Consensus 301 -~-~~~~~~~~g~p~~~~~~~i~d~~~~~~~~~g~~Gel~v~~~---~~~~gy~~~~~~~~~~~~---~~~~~~TgD~~~ 372 (493)
. .....+++|+|.++++++|+|++++++++.|+.|||+++|| ..+.+|+++++.+.+.+. .++||+|||+++
T Consensus 403 ~~~~~~~~~~~G~p~~g~~~~i~d~~~g~~~~~g~~Gel~i~gp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~TGDl~~ 482 (629)
T PRK10524 403 VEDRPTRLGSPGVPMYGYNVKLLNEVTGEPCGPNEKGVLVIEGPLPPGCMQTVWGDDDRFVKTYWSLFGRQVYSTFDWGI 482 (629)
T ss_pred cccCcCCCCCcccCcCCceEEEEeCCCCCCCCCCCcEEEEEcCCCChhhcCCccCChHHHHHhhhccCCCcEEEcCCcEE
Confidence 1 12345789999999999999965899999999999999998 577899998876665432 358999999999
Q ss_pred EcCCCcEEEEcccCCeEEeCceeeChHHHHHHHhcCCCcceEEEEeeeCCCCCeeEEEEEEeCCCCCCC--------HHH
Q 011116 373 FDSNGFLFIVDRLKELIKYKAYQVPPVELEHLLHSNPEIADAAVIPYPDEEAGQIPMAFVVRKPGSNIT--------EAE 444 (493)
Q Consensus 373 ~~~~g~~~~~GR~~d~i~~~G~~i~~~~ie~~l~~~~~v~~~~v~~~~~~~~~~~~~~~v~~~~~~~~~--------~~~ 444 (493)
+++||.+++.||.||+||++|.+|+|.+||++|.++|+|.+++|++.+++..++.+++++++.++...+ .++
T Consensus 483 ~d~dG~l~i~GR~dd~i~~~G~ri~p~eIE~~l~~~p~V~e~~vvg~~d~~~g~~~~~~vv~~~~~~~~~~~~~~~~~~~ 562 (629)
T PRK10524 483 RDADGYYFILGRTDDVINVAGHRLGTREIEESISSHPAVAEVAVVGVKDALKGQVAVAFVVPKDSDSLADREARLALEKE 562 (629)
T ss_pred EcCCCcEEEEEEecCeEEeCCEEeCHHHHHHHHHhCCCcceEEEEccccCCCCeEEEEEEEECCCCccccccchHHHHHH
Confidence 999999999999999999999999999999999999999999999999988889999999987653322 467
Q ss_pred HHHHHHhcCCCCCCcceEEEeccccCCCCCccchHHHHHHHhhCC
Q 011116 445 IMDFIAKQVAPYKKIRRVAFINSIPKSTAGKILRRELVTHAISGN 489 (493)
Q Consensus 445 l~~~l~~~l~~~~~p~~~~~~~~lP~t~~GK~~r~~l~~~~~~~~ 489 (493)
|+++++++|+++++|..|+++++||+|++||++|+.|++.+..+.
T Consensus 563 i~~~~~~~l~~~~~P~~i~~v~~lP~T~sGKi~R~~L~~~~~~~~ 607 (629)
T PRK10524 563 IMALVDSQLGAVARPARVWFVSALPKTRSGKLLRRAIQAIAEGRD 607 (629)
T ss_pred HHHHHHhhcCCCcCCCEEEEcCCCCCCCCcchHHHHHHHHHcCCC
Confidence 899999999999999999999999999999999999999876544
No 26
>PRK08314 long-chain-fatty-acid--CoA ligase; Validated
Probab=100.00 E-value=1.1e-63 Score=514.85 Aligned_cols=454 Identities=33% Similarity=0.529 Sum_probs=388.4
Q ss_pred hHHHHHHhhC-CCCCCCEEEEECCCCCCcHHHHHHHHHHcCCeeccCCCCCCHHHHHHHHhhcCCeEEEEcCCCcccCCC
Q 011116 18 TLSHALSKRD-SLCRKTTSLTSSPLPPSTSPVLYFSLLSLGVVISPANPLSSTSEVSHQIQLSKPSIAFATSHTSYKLPS 96 (493)
Q Consensus 18 ~lA~~L~~~~-gl~~gd~V~l~~~~~~~~~~~~~lA~~~~G~~~v~i~~~~~~~~l~~~l~~~~~~~il~~~~~~~~~~~ 96 (493)
++|.+| .+. |+++||+|+++++ |+++++++++||+++|++++|+++.++.+++.++++.++++.++++++....+..
T Consensus 47 ~~a~~L-~~~~g~~~g~~V~i~~~-~~~~~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~~ 124 (546)
T PRK08314 47 RLAGYL-QQECGVRKGDRVLLYMQ-NSPQFVIAYYAILRANAVVVPVNPMNREEELAHYVTDSGARVAIVGSELAPKVAP 124 (546)
T ss_pred HHHHHH-HHhhCCCCCCEEEEECC-CChHHHHHHHHHHHcCcEEeecCcCcCHHHHHHHHHhCCCeEEEEccchhhhHHH
Confidence 359999 666 9999999999999 9999999999999999999999999999999999999999999998876554332
Q ss_pred -----CCcEEEe-cCc------------------------------hhhhhhccCcccccccCCCCCCCCCCeEEEEccC
Q 011116 97 -----NLRTILM-DSP------------------------------EFISLLNQNEDVADFANSNMTVYQSDPAAILYSS 140 (493)
Q Consensus 97 -----~~~~~~~-~~~------------------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~TS 140 (493)
....+.+ +.. .|.+..... . ........++++++++|||
T Consensus 125 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~-~~~~~~~~~~~~a~i~~TS 199 (546)
T PRK08314 125 AVGNLRLRHVIVAQYSDYLPAEPEIAVPAWLRAEPPLQALAPGGVVAWKEALAAG----L-APPPHTAGPDDLAVLPYTS 199 (546)
T ss_pred HhhccCcceEEEecchhhcccccccCcccccccccccccccccccccHHHHhccc----C-CCCCCCCCCCCeEEEEeCC
Confidence 1111111 100 111111110 0 1122345678999999999
Q ss_pred CCCCCccceecchHHHHHHHHHhhhhcccCCCCCCCCCCcEEEEecChhHHHHH-HHHHHHHhcCCeEEEecCCCHHHHH
Q 011116 141 GTTGKVKGVLLSHLNVIAIIAGYYHVTEETDPNEGPPPHPVSFFTLPMFHVFGF-FMLVRAASKGETLVFMERFDFEKML 219 (493)
Q Consensus 141 GTTG~pK~v~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pl~~~~g~-~~~~~~l~~G~~~~~~~~~~~~~~~ 219 (493)
||||.||+|.++|.++...+......+. +.+.|++++.+|++|..|+ ..++.++..|+++++.+.+++..++
T Consensus 200 GtTG~PK~v~~s~~~l~~~~~~~~~~~~-------~~~~d~~l~~~p~~~~~g~~~~~~~~l~~G~~i~~~~~~~~~~~~ 272 (546)
T PRK08314 200 GTTGVPKGCMHTHRTVMANAVGSVLWSN-------STPESVVLAVLPLFHVTGMVHSMNAPIYAGATVVLMPRWDREAAA 272 (546)
T ss_pred CCCCCCcEEEEecHHHHHHHHHHHHhhC-------CCCCceEEEEcCchHHHHHHHHHHHHHHcCCeEEecCCCCHHHHH
Confidence 9999999999999999988887666653 4789999999999999998 6788899999999999888999999
Q ss_pred HHHHhcCeeecccChHHHHHHHhcccCCCCCCCCeeEEEecCCCCCHHHHHHHHHhCCCCceeccccccccCCccccccC
Q 011116 220 KAVENYRVTYMPVSPPLIVAFINSKLTDKYDLSSLQLLGCGGAPLGKEVTLKFKEKFPNVEIRQGYGLTETGGAGSRVIG 299 (493)
Q Consensus 220 ~~l~~~~~t~l~~~P~~~~~l~~~~~~~~~~l~~lr~v~~~Ge~~~~~~~~~~~~~~~~~~v~~~yG~tE~g~~~~~~~~ 299 (493)
+.++++++|++.++|+++..++.........++++|.+++||+++++++.+++.+.| ++++++.||+||++..... .
T Consensus 273 ~~i~~~~~t~~~~~p~~~~~ll~~~~~~~~~~~~l~~~~~gG~~~~~~~~~~~~~~~-~~~~~~~YG~tE~~~~~~~--~ 349 (546)
T PRK08314 273 RLIERYRVTHWTNIPTMVVDFLASPGLAERDLSSLRYIGGGGAAMPEAVAERLKELT-GLDYVEGYGLTETMAQTHS--N 349 (546)
T ss_pred HHHHHhcCceecccHHHHHHHHhCCCccccCchhhheeeeccccCCHHHHHHHHHHc-CCcEEecccccccccceec--C
Confidence 999999999999999999999876655556678999999999999999999999999 7999999999999876543 2
Q ss_pred CCCCCCCCccccccCCceEEEEcCCCCccCCCCCceEEEEeCccccccccCCccccccccc---CCCeeeccceEEEcCC
Q 011116 300 PDEAERHGSVGRLAELMEAKIVDPATGEALPPGQKGELWLRGPTIMKGYVGDDKATSETVH---SEGWLKTGDLCYFDSN 376 (493)
Q Consensus 300 ~~~~~~~~~~g~p~~~~~~~i~d~~~~~~~~~g~~Gel~v~~~~~~~gy~~~~~~~~~~~~---~~~~~~TgD~~~~~~~ 376 (493)
........++|.|.++++++++|+++++.++.|+.|||+++|+.++.||+++++.+.+.|. ..+||+|||+++++++
T Consensus 350 ~~~~~~~~~~G~~~~g~~~~i~d~~~~~~~~~g~~Gel~v~g~~~~~gY~~~~~~t~~~f~~~~~~~~~~TGDl~~~~~~ 429 (546)
T PRK08314 350 PPDRPKLQCLGIPTFGVDARVIDPETLEELPPGEVGEIVVHGPQVFKGYWNRPEATAEAFIEIDGKRFFRTGDLGRMDEE 429 (546)
T ss_pred CCcCCCCCccCcccCCeEEEEEeCCCCcCCCCCCceEEEEECCchhccccCChhHhhhhhhhcCCCceEecCCEEEEcCC
Confidence 2222345789999999999999988899999999999999999999999999988877763 2469999999999999
Q ss_pred CcEEEEcccCCeEEeCceeeChHHHHHHHhcCCCcceEEEEeeeCCCCCeeEEEEEEeCCCC--CCCHHHHHHHHHhcCC
Q 011116 377 GFLFIVDRLKELIKYKAYQVPPVELEHLLHSNPEIADAAVIPYPDEEAGQIPMAFVVRKPGS--NITEAEIMDFIAKQVA 454 (493)
Q Consensus 377 g~~~~~GR~~d~i~~~G~~i~~~~ie~~l~~~~~v~~~~v~~~~~~~~~~~~~~~v~~~~~~--~~~~~~l~~~l~~~l~ 454 (493)
|.+++.||.+|+|+++|.+|+|.+||++|.++|+|.+++|++.+++..++.+++++++.++. ..+.++++++++++|+
T Consensus 430 g~l~~~GR~~d~i~~~G~~v~~~eIE~~i~~~~~v~~~~v~~~~~~~~~~~~~a~v~~~~~~~~~~~~~~l~~~~~~~l~ 509 (546)
T PRK08314 430 GYFFITDRLKRMINASGFKVWPAEVENLLYKHPAIQEACVIATPDPRRGETVKAVVVLRPEARGKTTEEEIIAWAREHMA 509 (546)
T ss_pred CcEEEEecchhhEEeCCEEECHHHHHHHHHhCcchheEEEEeCCCcccCceeEEEEEECCCCCCCCCHHHHHHHHHHhcc
Confidence 99999999999999999999999999999999999999999999888888999999987653 3456899999999999
Q ss_pred CCCCcceEEEeccccCCCCCccchHHHHHHHhhC
Q 011116 455 PYKKIRRVAFINSIPKSTAGKILRRELVTHAISG 488 (493)
Q Consensus 455 ~~~~p~~~~~~~~lP~t~~GK~~r~~l~~~~~~~ 488 (493)
++++|..+.+++++|+|++||++|+.|++.....
T Consensus 510 ~~~~P~~~~~v~~iP~t~~GKv~r~~L~~~~~~~ 543 (546)
T PRK08314 510 AYKYPRIVEFVDSLPKSGSGKILWRQLQEQEKAR 543 (546)
T ss_pred cCCCCcEEEEecCCCCCCccceeHHHHHHHHhhh
Confidence 9999999999999999999999999999876653
No 27
>PLN03052 acetate--CoA ligase; Provisional
Probab=100.00 E-value=1.5e-63 Score=522.39 Aligned_cols=458 Identities=19% Similarity=0.237 Sum_probs=364.9
Q ss_pred HHHHHHhhCCCCCCCEEEEECCCCCCcHHHHHHHHHHcCCeeccCCCCCCHHHHHHHHhhcCCeEEEEcCCCcccCC---
Q 011116 19 LSHALSKRDSLCRKTTSLTSSPLPPSTSPVLYFSLLSLGVVISPANPLSSTSEVSHQIQLSKPSIAFATSHTSYKLP--- 95 (493)
Q Consensus 19 lA~~L~~~~gl~~gd~V~l~~~~~~~~~~~~~lA~~~~G~~~v~i~~~~~~~~l~~~l~~~~~~~il~~~~~~~~~~--- 95 (493)
+|++| .+.|+++||+|+++++ |++++++++|||+++|++++|+++.++.+++.+++++++++++|+++.....-.
T Consensus 221 lA~~L-~~~Gv~~GdrVai~~p-n~~e~via~LA~~~~Gav~vpi~p~~~~~~l~~rl~~~~~k~lit~d~~~~~gk~~~ 298 (728)
T PLN03052 221 VANAL-DALGFEKGDAIAIDMP-MNVHAVIIYLAIILAGCVVVSIADSFAPSEIATRLKISKAKAIFTQDVIVRGGKSIP 298 (728)
T ss_pred HHHHH-HHcCCCCCCEEEEEeC-CCHHHHHHHHHHHHcCCEEEeeCCCCCHHHHHHHHHhcCceEEEEcCccccCCcccc
Confidence 49999 8899999999999999 999999999999999999999999999999999999999999999875432100
Q ss_pred ------C--CCcEEEec-------------CchhhhhhccCcccc-cccCCCCCCCCCCeEEEEccCCCCCCccceecch
Q 011116 96 ------S--NLRTILMD-------------SPEFISLLNQNEDVA-DFANSNMTVYQSDPAAILYSSGTTGKVKGVLLSH 153 (493)
Q Consensus 96 ------~--~~~~~~~~-------------~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~i~~TSGTTG~pK~v~~t~ 153 (493)
+ ...++.+. ...|.+++....... ...........+++++|+|||||||.||||+++|
T Consensus 299 ~~~~~~~~~~~~~iv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~a~IlyTSGTTG~PKgVv~sh 378 (728)
T PLN03052 299 LYSRVVEAKAPKAIVLPADGKSVRVKLREGDMSWDDFLARANGLRRPDEYKAVEQPVEAFTNILFSSGTTGEPKAIPWTQ 378 (728)
T ss_pred hHHHHHHhcCCcEEEEeCCCCccccccccCCccHHHHHhccccccccccccccccCCCCcEEEEecCCCCCCCceEEECc
Confidence 0 01122221 123444433211000 0011112235689999999999999999999999
Q ss_pred HHHHHHHHHhhhhcccCCCCCCCCCCcEEEEecChhHHHHHHHHHHHHhcCCeEEEecC-CCHHHHHHHHHhcCeeeccc
Q 011116 154 LNVIAIIAGYYHVTEETDPNEGPPPHPVSFFTLPMFHVFGFFMLVRAASKGETLVFMER-FDFEKMLKAVENYRVTYMPV 232 (493)
Q Consensus 154 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pl~~~~g~~~~~~~l~~G~~~~~~~~-~~~~~~~~~l~~~~~t~l~~ 232 (493)
.+++.........+ ++.++|++++.+|++|+++.+.++.++..|+++++.++ .++..+++.++++++|++.+
T Consensus 379 ~~~l~~~~~~~~~~-------~l~~~d~~~~~~~l~w~~g~~~v~~~L~~Gat~vl~~g~p~~~~~~~~i~~~~vT~l~~ 451 (728)
T PLN03052 379 LTPLRAAADAWAHL-------DIRKGDIVCWPTNLGWMMGPWLVYASLLNGATLALYNGSPLGRGFAKFVQDAKVTMLGT 451 (728)
T ss_pred hHHHHHHHHHHHhc-------CCCCCcEEEECCCcHHHhHHHHHHHHHHhCCEEEEeCCCCCCChHHHHHHHHCCCEEEE
Confidence 98766554443333 34789999999999999999888899999999999864 45678999999999999999
Q ss_pred ChHHHHHHHhcccCCCCCCCCeeEEEecCCCCCHHHHHHHHHhCCCCceeccccccccCCccccccCCCCCCCCCccccc
Q 011116 233 SPPLIVAFINSKLTDKYDLSSLQLLGCGGAPLGKEVTLKFKEKFPNVEIRQGYGLTETGGAGSRVIGPDEAERHGSVGRL 312 (493)
Q Consensus 233 ~P~~~~~l~~~~~~~~~~l~~lr~v~~~Ge~~~~~~~~~~~~~~~~~~v~~~yG~tE~g~~~~~~~~~~~~~~~~~~g~p 312 (493)
+|++++.|.+.......+++++|.++++||+++++...++.+.++..++.+.||+||+++....... ......+++|.|
T Consensus 452 ~Pt~l~~l~~~~~~~~~dlssLr~i~s~Ge~l~~~~~~~~~~~~~~~~i~~~yG~TE~~~~~~~~~~-~~~~~~g~~g~p 530 (728)
T PLN03052 452 VPSIVKTWKNTNCMAGLDWSSIRCFGSTGEASSVDDYLWLMSRAGYKPIIEYCGGTELGGGFVTGSL-LQPQAFAAFSTP 530 (728)
T ss_pred CHHHHHHHHhcCCcccCChhheeEEEecCCCCCHHHHHHHHHhcCCCCeEeeccChhhCcccccCCC-CCCCCCCccccC
Confidence 9999999987654456678999999999999999999998887744679999999999764432111 122345789999
Q ss_pred cCCceEEEEcCCCCccCCCCC--ceEEEEeCcc--ccccccCCccccccccc------CCCeeeccceEEEcCCCcEEEE
Q 011116 313 AELMEAKIVDPATGEALPPGQ--KGELWLRGPT--IMKGYVGDDKATSETVH------SEGWLKTGDLCYFDSNGFLFIV 382 (493)
Q Consensus 313 ~~~~~~~i~d~~~~~~~~~g~--~Gel~v~~~~--~~~gy~~~~~~~~~~~~------~~~~~~TgD~~~~~~~g~~~~~ 382 (493)
.+|++++|+| +++++++.|+ .|||++.++. ...+|+++.. ....|. ...||+|||+++++++|+++++
T Consensus 531 ~~g~~v~v~d-~~g~~v~~g~~~~GEL~v~~~~~~~~~~~~~~~~-~~~yf~~~p~~~g~~~~~tGDl~~~d~dG~l~i~ 608 (728)
T PLN03052 531 AMGCKLFILD-DSGNPYPDDAPCTGELALFPLMFGASSTLLNADH-YKVYFKGMPVFNGKILRRHGDIFERTSGGYYRAH 608 (728)
T ss_pred CCCceEEEEC-CCCCCCCCCCCceEEEEEeCCCCCCCccccCchh-hhhhhhcCCCCCCCEEEecCceEEECCCCeEEEE
Confidence 9999999999 7799999885 6999998642 2345665432 222221 2238999999999999999999
Q ss_pred cccCCeEEeCceeeChHHHHHHHh-cCCCcceEEEEeeeCCCCC-eeEEEEEEeC--CCCCCCHHHHHH----HHHhcCC
Q 011116 383 DRLKELIKYKAYQVPPVELEHLLH-SNPEIADAAVIPYPDEEAG-QIPMAFVVRK--PGSNITEAEIMD----FIAKQVA 454 (493)
Q Consensus 383 GR~~d~i~~~G~~i~~~~ie~~l~-~~~~v~~~~v~~~~~~~~~-~~~~~~v~~~--~~~~~~~~~l~~----~l~~~l~ 454 (493)
||+||+||++|.+|++.|||++|. .+|.|.+++|++.+++..+ +.++++|++. ++...+.+++++ +++++++
T Consensus 609 GR~Dd~I~~~G~rI~~~EIE~~l~~~~p~V~eaaVvg~~d~~~g~e~~~afVvl~~~~g~~~~~~~L~~~i~~~i~~~l~ 688 (728)
T PLN03052 609 GRADDTMNLGGIKVSSVEIERVCNAADESVLETAAIGVPPPGGGPEQLVIAAVLKDPPGSNPDLNELKKIFNSAIQKKLN 688 (728)
T ss_pred ecCCCEEeeCCEEeCHHHHHHHHHhcCCCcceEEEEeeecCCCCcEEEEEEEEEecCCCCCCCHHHHHHHHHHHHHhhcC
Confidence 999999999999999999999995 7899999999999988665 8899999987 555555555555 4667789
Q ss_pred CCCCcceEEEeccccCCCCCccchHHHHHHHhhC
Q 011116 455 PYKKIRRVAFINSIPKSTAGKILRRELVTHAISG 488 (493)
Q Consensus 455 ~~~~p~~~~~~~~lP~t~~GK~~r~~l~~~~~~~ 488 (493)
++.+|..|+++++||+|.+||++|+.||+.+.+.
T Consensus 689 ~~~~p~~i~~v~~lP~T~sGKi~Rr~Lr~~~~~~ 722 (728)
T PLN03052 689 PLFKVSAVVIVPSFPRTASNKVMRRVLRQQLAQE 722 (728)
T ss_pred CccCCCEEEEcCCCCCCCchHHHHHHHHHHHHhh
Confidence 9999999999999999999999999999988653
No 28
>PRK07638 acyl-CoA synthetase; Validated
Probab=100.00 E-value=1.3e-63 Score=506.79 Aligned_cols=445 Identities=21% Similarity=0.337 Sum_probs=381.5
Q ss_pred HHHHHHhhCCCCCCCEEEEECCCCCCcHHHHHHHHHHcCCeeccCCCCCCHHHHHHHHhhcCCeEEEEcCCCcccCCC-C
Q 011116 19 LSHALSKRDSLCRKTTSLTSSPLPPSTSPVLYFSLLSLGVVISPANPLSSTSEVSHQIQLSKPSIAFATSHTSYKLPS-N 97 (493)
Q Consensus 19 lA~~L~~~~gl~~gd~V~l~~~~~~~~~~~~~lA~~~~G~~~v~i~~~~~~~~l~~~l~~~~~~~il~~~~~~~~~~~-~ 97 (493)
+|++| .+.|. +||+|+++++ |+++++++++||+++|++++|+++.++.+++.++++.+++++++++......+.. .
T Consensus 39 ~a~~L-~~~~~-~~~~v~i~~~-~~~~~~~~~la~~~~G~~~v~l~~~~~~~~~~~~~~~~~~~~vi~~~~~~~~~~~~~ 115 (487)
T PRK07638 39 VANWL-NEKES-KNKTIAILLE-NRIEFLQLFAGAAMAGWTCVPLDIKWKQDELKERLAISNADMIVTERYKLNDLPDEE 115 (487)
T ss_pred HHHHH-HHhCC-CCCEEEEEcC-CCHHHHHHHHHHHHcCeEEEecCccCCHHHHHHHHHhCCCCEEEEecccccchhhcc
Confidence 49999 66674 8999999999 9999999999999999999999999999999999999999999999876555543 2
Q ss_pred CcEEEecCchhhhhhccCcccccccCCCCCCCCCCeEEEEccCCCCCCccceecchHHHHHHHHHhhhhcccCCCCCCCC
Q 011116 98 LRTILMDSPEFISLLNQNEDVADFANSNMTVYQSDPAAILYSSGTTGKVKGVLLSHLNVIAIIAGYYHVTEETDPNEGPP 177 (493)
Q Consensus 98 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~TSGTTG~pK~v~~t~~~~~~~~~~~~~~~~~~~~~~~~~ 177 (493)
..++.++ .+........ . .........+++++++|||||||.||+|.++|.++...+......+. ..
T Consensus 116 ~~~~~~~--~~~~~~~~~~---~-~~~~~~~~~~~~a~i~~TSGtTG~PKgv~~s~~~~~~~~~~~~~~~~-------~~ 182 (487)
T PRK07638 116 GRVIEID--EWKRMIEKYL---P-TYAPIENVQNAPFYMGFTSGSTGKPKAFLRAQQSWLHSFDCNVHDFH-------MK 182 (487)
T ss_pred ceEEEeh--hhhhhhhhcc---c-cccccccCCCCcEEEEeCCCCCCCCcEEEEecHHHHHHHHHHHHhcC-------cC
Confidence 2333332 2332222211 1 11122234577899999999999999999999999888777666553 47
Q ss_pred CCcEEEEecChhHHHHHHHHHHHHhcCCeEEEecCCCHHHHHHHHHhcCeeecccChHHHHHHHhcccCCCCCCCCeeEE
Q 011116 178 PHPVSFFTLPMFHVFGFFMLVRAASKGETLVFMERFDFEKMLKAVENYRVTYMPVSPPLIVAFINSKLTDKYDLSSLQLL 257 (493)
Q Consensus 178 ~~~~~~~~~pl~~~~g~~~~~~~l~~G~~~~~~~~~~~~~~~~~l~~~~~t~l~~~P~~~~~l~~~~~~~~~~l~~lr~v 257 (493)
++|+++...|++|..++..++.++..|+++++.+.+++..+++.++++++|++.++|+++..|.+... ...+.+.+
T Consensus 183 ~~d~~~~~~~l~~~~~l~~~~~~l~~g~~~~~~~~~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~----~~~~~~~~ 258 (487)
T PRK07638 183 REDSVLIAGTLVHSLFLYGAISTLYVGQTVHLMRKFIPNQVLDKLETENISVMYTVPTMLESLYKENR----VIENKMKI 258 (487)
T ss_pred CCCEEEEeecchHHHHHHHHHHHHccCcEEEEcCCCCHHHHHHHHHHcCCeEEEeCcHHHHHHHhCcC----cCCceeEE
Confidence 88999999999999888888999999999999988899999999999999999999999999987632 23456667
Q ss_pred EecCCCCCHHHHHHHHHhCCCCceeccccccccCCccccccCCCCCCCCCccccccCCceEEEEcCCCCccCCCCCceEE
Q 011116 258 GCGGAPLGKEVTLKFKEKFPNVEIRQGYGLTETGGAGSRVIGPDEAERHGSVGRLAELMEAKIVDPATGEALPPGQKGEL 337 (493)
Q Consensus 258 ~~~Ge~~~~~~~~~~~~~~~~~~v~~~yG~tE~g~~~~~~~~~~~~~~~~~~g~p~~~~~~~i~d~~~~~~~~~g~~Gel 337 (493)
+++|+.+++++.+++++.||++.+++.||+||++.+..... ........++|+|+++++++|+| +++++++.|+.|||
T Consensus 259 ~~~G~~l~~~~~~~~~~~~~~~~~~~~YG~tE~~~~~~~~~-~~~~~~~~~~G~~~~~~~~~i~d-~~g~~~~~g~~Gel 336 (487)
T PRK07638 259 ISSGAKWEAEAKEKIKNIFPYAKLYEFYGASELSFVTALVD-EESERRPNSVGRPFHNVQVRICN-EAGEEVQKGEIGTV 336 (487)
T ss_pred EEcCCCCCHHHHHHHHHHcCCCeEEEEecCCccCceEEecc-cccCCCCCCCCcccCCcEEEEEC-CCCCCCCCCCCeEE
Confidence 88999999999999999998999999999999987655432 22234567899999999999999 67899999999999
Q ss_pred EEeCccccccccCCcccccccccCCCeeeccceEEEcCCCcEEEEcccCCeEEeCceeeChHHHHHHHhcCCCcceEEEE
Q 011116 338 WLRGPTIMKGYVGDDKATSETVHSEGWLKTGDLCYFDSNGFLFIVDRLKELIKYKAYQVPPVELEHLLHSNPEIADAAVI 417 (493)
Q Consensus 338 ~v~~~~~~~gy~~~~~~~~~~~~~~~~~~TgD~~~~~~~g~~~~~GR~~d~i~~~G~~i~~~~ie~~l~~~~~v~~~~v~ 417 (493)
+++|+.++.||++++..+.+.+ .+|||+|||+++++++|++++.||.+|+||++|.+|+|.+||++|.++|+|.+++|+
T Consensus 337 ~v~~~~~~~gy~~~~~~~~~~~-~~g~~~TGDl~~~d~~g~l~i~GR~~d~i~~~G~~v~~~eiE~~l~~~~~v~~~~v~ 415 (487)
T PRK07638 337 YVKSPQFFMGYIIGGVLARELN-ADGWMTVRDVGYEDEEGFIYIVGREKNMILFGGINIFPEEIESVLHEHPAVDEIVVI 415 (487)
T ss_pred EEecccceeeecCCHHHHhhhc-cCCcEecCccEeEcCCCeEEEEecCCCeEEeCCEEECHHHHHHHHHhCCCeeeEEEE
Confidence 9999999999999987766554 589999999999999999999999999999999999999999999999999999999
Q ss_pred eeeCCCCCeeEEEEEEeCCCCCCCHHHHHHHHHhcCCCCCCcceEEEeccccCCCCCccchHHHHHHHhhCCC
Q 011116 418 PYPDEEAGQIPMAFVVRKPGSNITEAEIMDFIAKQVAPYKKIRRVAFINSIPKSTAGKILRRELVTHAISGNL 490 (493)
Q Consensus 418 ~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~l~~~l~~~~~p~~~~~~~~lP~t~~GK~~r~~l~~~~~~~~~ 490 (493)
+..++..++.+.++++. ..+.++++++++++++++++|..+++++++|+|++||++|+.|++++.+.+.
T Consensus 416 ~~~~~~~g~~~~~~v~~----~~~~~~l~~~~~~~l~~~~~p~~i~~v~~iP~t~~GKv~r~~L~~~~~~~~~ 484 (487)
T PRK07638 416 GVPDSYWGEKPVAIIKG----SATKQQLKSFCLQRLSSFKIPKEWHFVDEIPYTNSGKIARMEAKSWIENQEK 484 (487)
T ss_pred ecCchhcCCeeEEEEEC----CCCHHHHHHHHHHHhhcccCCcEEEEecccCCCCcccccHHHHHHHHhcccc
Confidence 99988778888888764 3567899999999999999999999999999999999999999999988764
No 29
>PRK06060 acyl-CoA synthetase; Validated
Probab=100.00 E-value=5.2e-64 Score=530.23 Aligned_cols=446 Identities=22% Similarity=0.340 Sum_probs=374.1
Q ss_pred chhhhHHHHHHhhCCCCCCCEEEEECCCCCCcHHHHHHHHHHcCCeeccCCCCCCHHHHHHHHhhcCCeEEEEcCCCccc
Q 011116 14 SARFTLSHALSKRDSLCRKTTSLTSSPLPPSTSPVLYFSLLSLGVVISPANPLSSTSEVSHQIQLSKPSIAFATSHTSYK 93 (493)
Q Consensus 14 ~~~~~lA~~L~~~~gl~~gd~V~l~~~~~~~~~~~~~lA~~~~G~~~v~i~~~~~~~~l~~~l~~~~~~~il~~~~~~~~ 93 (493)
++++ |++| .+.|+++||+|+++++ |+++++++++||+++|++++|++|.++.+++.++++.++++++|++......
T Consensus 40 ~~~l--A~~L-~~~g~~~g~~V~i~~~-~~~~~~~~~la~~~aG~~~vpi~p~~~~~~l~~~l~~~~~~~vi~~~~~~~~ 115 (705)
T PRK06060 40 AARL--GEVL-RNRGLSSGDRVLLCLP-DSPDLVQLLLACLARGVMAFLANPELHRDDHALAARNTEPALVVTSDALRDR 115 (705)
T ss_pred HHHH--HHHH-HHcCCCCCCEEEEECC-CCHHHHHHHHHHHHhCcEEEecCCCCCHHHHHHHHhcCCCcEEEEchHHhhh
Confidence 4444 9999 7789999999999999 9999999999999999999999999999999999999999999998765443
Q ss_pred CCCCCcEEEecCchhhhhhccCcccccccCCCCCCCCCCeEEEEccCCCCCCccceecchHHHHHHHHHhh-hhcccCCC
Q 011116 94 LPSNLRTILMDSPEFISLLNQNEDVADFANSNMTVYQSDPAAILYSSGTTGKVKGVLLSHLNVIAIIAGYY-HVTEETDP 172 (493)
Q Consensus 94 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~TSGTTG~pK~v~~t~~~~~~~~~~~~-~~~~~~~~ 172 (493)
+... ..+. ...+...... ..........++++++++|||||||.||+|.++|.++...+.... ..+
T Consensus 116 ~~~~-~~~~-----~~~~~~~~~~--~~~~~~~~~~~~~~a~il~TSGSTG~PKgV~~sh~~~~~~~~~~~~~~~----- 182 (705)
T PRK06060 116 FQPS-RVAE-----AAELMSEAAR--VAPGGYEPMGGDALAYATYTSGTTGPPKAAIHRHADPLTFVDAMCRKAL----- 182 (705)
T ss_pred hccc-ccch-----hhhhhhhccc--cCCCCCCCCCCCCeEEEEECCCCCCCCcEEEEccccHHHHHHHHHHHhh-----
Confidence 3221 1110 1111111100 001111234568999999999999999999999999987765543 233
Q ss_pred CCCCCCCcEEEEecChhHHHHH-HHHHHHHhcCCeEEEec-CCCHHHHHHHHHhcCeeecccChHHHHHHHhcccCCCCC
Q 011116 173 NEGPPPHPVSFFTLPMFHVFGF-FMLVRAASKGETLVFME-RFDFEKMLKAVENYRVTYMPVSPPLIVAFINSKLTDKYD 250 (493)
Q Consensus 173 ~~~~~~~~~~~~~~pl~~~~g~-~~~~~~l~~G~~~~~~~-~~~~~~~~~~l~~~~~t~l~~~P~~~~~l~~~~~~~~~~ 250 (493)
++.+.+++++..|++|..++ ..++.++..|+++++.+ ..++..+...++++++|+++++|+++..+++... ...
T Consensus 183 --~~~~~d~~l~~~~~~~~~~~~~~~~~~l~~G~~~v~~~~~~~~~~~~~~i~~~~~t~~~~~P~~l~~l~~~~~--~~~ 258 (705)
T PRK06060 183 --RLTPEDTGLCSARMYFAYGLGNSVWFPLATGGSAVINSAPVTPEAAAILSARFGPSVLYGVPNFFARVIDSCS--PDS 258 (705)
T ss_pred --CCCCcceeEEeccchhhcchhHHHHHHHhcCCEEEEeCCCCCHHHHHHHHHhcCCeEEeeHHHHHHHHHHhcc--ccc
Confidence 34788999999999999887 56788899999999885 4688889999999999999999999999887543 234
Q ss_pred CCCeeEEEecCCCCCHHHHHHHHHhCCCCceeccccccccCCccccccCCCCCCCCCccccccCCceEEEEcCCCCccCC
Q 011116 251 LSSLQLLGCGGAPLGKEVTLKFKEKFPNVEIRQGYGLTETGGAGSRVIGPDEAERHGSVGRLAELMEAKIVDPATGEALP 330 (493)
Q Consensus 251 l~~lr~v~~~Ge~~~~~~~~~~~~~~~~~~v~~~yG~tE~g~~~~~~~~~~~~~~~~~~g~p~~~~~~~i~d~~~~~~~~ 330 (493)
++++|.+++|||++++++.+++.+.|+++++++.||+||++...... ........++|+|+++++++|+| +++++++
T Consensus 259 ~~slr~i~~gGe~l~~~~~~~~~~~~~~~~~~~~YG~tE~~~~~~~~--~~~~~~~~~iG~p~~~~~v~i~d-~~g~~~~ 335 (705)
T PRK06060 259 FRSLRCVVSAGEALELGLAERLMEFFGGIPILDGIGSTEVGQTFVSN--RVDEWRLGTLGRVLPPYEIRVVA-PDGTTAG 335 (705)
T ss_pred ccceeEEEEecCcCCHHHHHHHHHHcCCCceEeeeeccccCceEEec--cCCCCCcCcccccCCCcEEEEEC-CCCCCCC
Confidence 68899999999999999999999999779999999999998654432 11223456899999999999999 5688999
Q ss_pred CCCceEEEEeCccccccccCCcccccccccCCCeeeccceEEEcCCCcEEEEcccCCeEEeCceeeChHHHHHHHhcCCC
Q 011116 331 PGQKGELWLRGPTIMKGYVGDDKATSETVHSEGWLKTGDLCYFDSNGFLFIVDRLKELIKYKAYQVPPVELEHLLHSNPE 410 (493)
Q Consensus 331 ~g~~Gel~v~~~~~~~gy~~~~~~~~~~~~~~~~~~TgD~~~~~~~g~~~~~GR~~d~i~~~G~~i~~~~ie~~l~~~~~ 410 (493)
.|+.|||+++|+.++.||+++++.+. ..++||+|||++++++||++++.||.||+||++|++|++.+||+.|.+++.
T Consensus 336 ~g~~GEl~i~g~~v~~GY~~~~~~~~---~~~~~~~TGDl~~~~~dG~l~~~GR~dd~ik~~G~~v~~~eIE~~l~~~~~ 412 (705)
T PRK06060 336 PGVEGDLWVRGPAIAKGYWNRPDSPV---ANEGWLDTRDRVCIDSDGWVTYRCRADDTEVIGGVNVDPREVERLIIEDEA 412 (705)
T ss_pred CCCceEEEEccchhhhhhhCCCcccc---cCCCcEECCeeEEECCCceEEEecccCceEEECCEEECHHHHHHHHHhCCC
Confidence 99999999999999999999988653 357999999999999999999999999999999999999999999999999
Q ss_pred cceEEEEeeeCCCCCeeEEEEEEeCCCCCCCH---HHHHHHHHhcCCCCCCcceEEEeccccCCCCCccchHHHHHHHh
Q 011116 411 IADAAVIPYPDEEAGQIPMAFVVRKPGSNITE---AEIMDFIAKQVAPYKKIRRVAFINSIPKSTAGKILRRELVTHAI 486 (493)
Q Consensus 411 v~~~~v~~~~~~~~~~~~~~~v~~~~~~~~~~---~~l~~~l~~~l~~~~~p~~~~~~~~lP~t~~GK~~r~~l~~~~~ 486 (493)
|.+++|++.+++..++.+++++++.++...+. .+++++++++|+.|++|..|+++++||+|++||++|+.|++.+.
T Consensus 413 V~~a~vv~~~~~~~~~~~~a~vv~~~~~~~~~~~~~~i~~~l~~~L~~~~~P~~i~~v~~iP~t~~GKidr~~L~~~~~ 491 (705)
T PRK06060 413 VAEAAVVAVRESTGASTLQAFLVATSGATIDGSVMRDLHRGLLNRLSAFKVPHRFAVVDRLPRTPNGKLVRGALRKQSP 491 (705)
T ss_pred eeEEEEEeecCccCCeeEEEEEEeccccCcChHHHHHHHHHHHHhCCCCcCCcEEEEeecCCCCcchhhHHHHHHhhcc
Confidence 99999999988878888999999876544443 57888999999999999999999999999999999999998753
No 30
>PRK13382 acyl-CoA synthetase; Provisional
Probab=100.00 E-value=1e-63 Score=512.67 Aligned_cols=446 Identities=27% Similarity=0.378 Sum_probs=376.5
Q ss_pred chhhhHHHHHHhhCCCCCCCEEEEECCCCCCcHHHHHHHHHHcCCeeccCCCCCCHHHHHHHHhhcCCeEEEEcCCCccc
Q 011116 14 SARFTLSHALSKRDSLCRKTTSLTSSPLPPSTSPVLYFSLLSLGVVISPANPLSSTSEVSHQIQLSKPSIAFATSHTSYK 93 (493)
Q Consensus 14 ~~~~~lA~~L~~~~gl~~gd~V~l~~~~~~~~~~~~~lA~~~~G~~~v~i~~~~~~~~l~~~l~~~~~~~il~~~~~~~~ 93 (493)
++++ |++| .+.|+++||+|+++++ |+++++++++||+++|++++|+++.++.+++.++++.+++++++++......
T Consensus 78 ~~~~--A~~L-~~~g~~~g~~V~i~~~-n~~~~~~~~lA~~~~G~~~vpl~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~ 153 (537)
T PRK13382 78 SDAL--AAAL-QALPIGEPRVVGIMCR-NHRGFVEALLAANRIGADILLLNTSFAGPALAEVVTREGVDTVIYDEEFSAT 153 (537)
T ss_pred HHHH--HHHH-HHcCCCCCCEEEEEec-CcHHHHHHHHHHHHcCcEEEecCcccCHHHHHHHHHhcCCCEEEEchhhHHH
Confidence 4444 9999 7789999999999999 9999999999999999999999999999999999999999999998765443
Q ss_pred CCC-------CCcEEEecCc----hhhhhhccCcccccccCCCCCCCCCCeEEEEccCCCCCCccceecchHHHHHHHHH
Q 011116 94 LPS-------NLRTILMDSP----EFISLLNQNEDVADFANSNMTVYQSDPAAILYSSGTTGKVKGVLLSHLNVIAIIAG 162 (493)
Q Consensus 94 ~~~-------~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~TSGTTG~pK~v~~t~~~~~~~~~~ 162 (493)
+.. ....+.+++. .+..+..... .. ......++.++++|||||||.||+|.++|.++......
T Consensus 154 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~-~~~~~~~~~~~il~TSGTTG~PKgv~~s~~~~~~~~~~ 227 (537)
T PRK13382 154 VDRALADCPQATRIVAWTDEDHDLTVEVLIAAHA-----GQ-RPEPTGRKGRVILLTSGTTGTPKGARRSGPGGIGTLKA 227 (537)
T ss_pred HHHHHhhccccceEEEecCCcccccHHHHhhccC-----cC-CCCCCCCCCeEEEECCCCCCCCCEEEeccchHHHHHHH
Confidence 221 1112222221 1222222211 00 11234678899999999999999999999888776666
Q ss_pred hhhhcccCCCCCCCCCCcEEEEecChhHHHHHHHHHHHHhcCCeEEEecCCCHHHHHHHHHhcCeeecccChHHHHHHHh
Q 011116 163 YYHVTEETDPNEGPPPHPVSFFTLPMFHVFGFFMLVRAASKGETLVFMERFDFEKMLKAVENYRVTYMPVSPPLIVAFIN 242 (493)
Q Consensus 163 ~~~~~~~~~~~~~~~~~~~~~~~~pl~~~~g~~~~~~~l~~G~~~~~~~~~~~~~~~~~l~~~~~t~l~~~P~~~~~l~~ 242 (493)
....+. +..+++++...|++|.+++..++.++..|+++++...++++.+++.++++++|++.++|++++.|++
T Consensus 228 ~~~~~~-------~~~~~~~l~~~p~~~~~g~~~~~~~l~~g~~~~~~~~~~~~~~~~~i~~~~vt~~~~~P~~~~~l~~ 300 (537)
T PRK13382 228 ILDRTP-------WRAEEPTVIVAPMFHAWGFSQLVLAASLACTIVTRRRFDPEATLDLIDRHRATGLAVVPVMFDRIMD 300 (537)
T ss_pred HHHhhC-------CCCCCeEEEecChHhhhHHHHHHHHHhcCcEEEECCCcCHHHHHHHHHHhCCEEEEehHHHHHHHHc
Confidence 555543 3688899999999999999888999999999999888899999999999999999999999999987
Q ss_pred cccC--CCCCCCCeeEEEecCCCCCHHHHHHHHHhCCCCceeccccccccCCccccccCCCCCCCCCccccccCCceEEE
Q 011116 243 SKLT--DKYDLSSLQLLGCGGAPLGKEVTLKFKEKFPNVEIRQGYGLTETGGAGSRVIGPDEAERHGSVGRLAELMEAKI 320 (493)
Q Consensus 243 ~~~~--~~~~l~~lr~v~~~Ge~~~~~~~~~~~~~~~~~~v~~~yG~tE~g~~~~~~~~~~~~~~~~~~g~p~~~~~~~i 320 (493)
.... ...+++++|.+++||+++++++.+.|.+.| +..+++.||+||++.+++.+. .......+++|+|.+++.++|
T Consensus 301 ~~~~~~~~~~~~~lr~i~~gG~~l~~~~~~~~~~~~-~~~i~~~YG~TE~~~~~~~~~-~~~~~~~~~vG~p~~~~~~~i 378 (537)
T PRK13382 301 LPAEVRNRYSGRSLRFAAASGSRMRPDVVIAFMDQF-GDVIYNNYNATEAGMIATATP-ADLRAAPDTAGRPAEGTEIRI 378 (537)
T ss_pred CCchhcccCCccceeEEEEcCCCCCHHHHHHHHHHc-CCcEEecccccccCcceecCh-hHhccCCCCccccCcCcEEEE
Confidence 6432 233456899999999999999999999999 678999999999987665422 112235678999999999999
Q ss_pred EcCCCCccCCCCCceEEEEeCccccccccCCcccccccccCCCeeeccceEEEcCCCcEEEEcccCCeEEeCceeeChHH
Q 011116 321 VDPATGEALPPGQKGELWLRGPTIMKGYVGDDKATSETVHSEGWLKTGDLCYFDSNGFLFIVDRLKELIKYKAYQVPPVE 400 (493)
Q Consensus 321 ~d~~~~~~~~~g~~Gel~v~~~~~~~gy~~~~~~~~~~~~~~~~~~TgD~~~~~~~g~~~~~GR~~d~i~~~G~~i~~~~ 400 (493)
+| +++++++.|+.|||+++|+.++.||+ ++.+.. + .+|||+|||+++++++|++++.||++|+||.+|.+|++.+
T Consensus 379 ~d-~~~~~~~~g~~GEl~v~g~~~~~gY~--~~~~~~-~-~~g~~~TGDl~~~~~~g~l~~~GR~dd~ik~~G~~v~~~e 453 (537)
T PRK13382 379 LD-QDFREVPTGEVGTIFVRNDTQFDGYT--SGSTKD-F-HDGFMASGDVGYLDENGRLFVVGRDDEMIVSGGENVYPIE 453 (537)
T ss_pred EC-CCCCCCCCCCeeEEEEEcCCcccCcc--ccchhh-c-cCCCEeeCceEEEeCCCcEEEeccccceeEECCEEECHHH
Confidence 99 56889999999999999999999998 333332 3 3789999999999999999999999999999999999999
Q ss_pred HHHHHhcCCCcceEEEEeeeCCCCCeeEEEEEEeCCCCCCCHHHHHHHHHhcCCCCCCcceEEEeccccCCCCCccchHH
Q 011116 401 LEHLLHSNPEIADAAVIPYPDEEAGQIPMAFVVRKPGSNITEAEIMDFIAKQVAPYKKIRRVAFINSIPKSTAGKILRRE 480 (493)
Q Consensus 401 ie~~l~~~~~v~~~~v~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~l~~~l~~~~~p~~~~~~~~lP~t~~GK~~r~~ 480 (493)
||..|.++|+|.+++|++.+++..++.+.+++++.++...+.++++++++++|+.+++|..+.+++++|+|++||++|+.
T Consensus 454 IE~~l~~~~~V~~~~v~~~~~~~~g~~~~a~vv~~~~~~~~~~~l~~~l~~~l~~~~~P~~i~~v~~lP~t~~gK~~r~~ 533 (537)
T PRK13382 454 VEKTLATHPDVAEAAVIGVDDEQYGQRLAAFVVLKPGASATPETLKQHVRDNLANYKVPRDIVVLDELPRGATGKILRRE 533 (537)
T ss_pred HHHHHHhCCCEeeEEEEccCccccCCEEEEEEEECCCCCCCHHHHHHHHHHhccCCCCCcEEEEeccCCCCCCCCCcHHh
Confidence 99999999999999999999887888999999988776677899999999999999999999999999999999999999
Q ss_pred HHH
Q 011116 481 LVT 483 (493)
Q Consensus 481 l~~ 483 (493)
|++
T Consensus 534 L~~ 536 (537)
T PRK13382 534 LQA 536 (537)
T ss_pred hCC
Confidence 864
No 31
>PRK07514 malonyl-CoA synthase; Validated
Probab=100.00 E-value=2.6e-63 Score=507.29 Aligned_cols=452 Identities=28% Similarity=0.424 Sum_probs=391.1
Q ss_pred hHHHHHHhhCCCCCCCEEEEECCCCCCcHHHHHHHHHHcCCeeccCCCCCCHHHHHHHHhhcCCeEEEEcCCCcccCCC-
Q 011116 18 TLSHALSKRDSLCRKTTSLTSSPLPPSTSPVLYFSLLSLGVVISPANPLSSTSEVSHQIQLSKPSIAFATSHTSYKLPS- 96 (493)
Q Consensus 18 ~lA~~L~~~~gl~~gd~V~l~~~~~~~~~~~~~lA~~~~G~~~v~i~~~~~~~~l~~~l~~~~~~~il~~~~~~~~~~~- 96 (493)
++|++| .+.|+++||+|+++++ |+++++++++||+++|++++|+++..+.+++..+++.++++++++++.....+.+
T Consensus 40 ~la~~L-~~~g~~~gd~v~i~~~-~~~e~~v~~la~~~~G~~~v~l~~~~~~~~~~~~l~~~~~~~ii~~~~~~~~~~~~ 117 (504)
T PRK07514 40 RLANLL-VALGVKPGDRVAVQVE-KSPEALALYLATLRAGAVFLPLNTAYTLAELDYFIGDAEPALVVCDPANFAWLSKI 117 (504)
T ss_pred HHHHHH-HHcCCCCCCEEEEECC-CCHHHHHHHHHHHHcCcEEEECCCCCCHHHHHHHHHhCCCcEEEEccchhHHHHHh
Confidence 359999 7789999999999999 9999999999999999999999999999999999999999999999765543322
Q ss_pred ----CCc-EEEecCch---hhhhhccCcccccccCCCCCCCCCCeEEEEccCCCCCCccceecchHHHHHHHHHhhhhcc
Q 011116 97 ----NLR-TILMDSPE---FISLLNQNEDVADFANSNMTVYQSDPAAILYSSGTTGKVKGVLLSHLNVIAIIAGYYHVTE 168 (493)
Q Consensus 97 ----~~~-~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~TSGTTG~pK~v~~t~~~~~~~~~~~~~~~~ 168 (493)
... .+.++... +.+..... ...........+++++++|||||||.||++.++|.++...+......+.
T Consensus 118 ~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~a~i~~TSGtTG~PK~v~~s~~~l~~~~~~~~~~~~ 193 (504)
T PRK07514 118 AAAAGAPHVETLDADGTGSLLEAAAAA----PDDFETVPRGADDLAAILYTSGTTGRSKGAMLSHGNLLSNALTLVDYWR 193 (504)
T ss_pred hhccCCceEEEecCCCcccHHHhhhhc----CcccCcccCCCCCeEEEEECCCCCCCCcEEEEecHHHHHHHHHHHHHhC
Confidence 111 33333221 11111111 1112233456789999999999999999999999999988776666553
Q ss_pred cCCCCCCCCCCcEEEEecChhHHHHH-HHHHHHHhcCCeEEEecCCCHHHHHHHHHhcCeeecccChHHHHHHHhcccCC
Q 011116 169 ETDPNEGPPPHPVSFFTLPMFHVFGF-FMLVRAASKGETLVFMERFDFEKMLKAVENYRVTYMPVSPPLIVAFINSKLTD 247 (493)
Q Consensus 169 ~~~~~~~~~~~~~~~~~~pl~~~~g~-~~~~~~l~~G~~~~~~~~~~~~~~~~~l~~~~~t~l~~~P~~~~~l~~~~~~~ 247 (493)
..+++++++.+|++|..++ ...+.++..|+++++.+..++..+++.+. ++|++.++|+++..++......
T Consensus 194 -------~~~~d~~l~~~p~~~~~g~~~~~~~~l~~G~~~~~~~~~~~~~~~~~i~--~~t~~~~~P~~~~~l~~~~~~~ 264 (504)
T PRK07514 194 -------FTPDDVLIHALPIFHTHGLFVATNVALLAGASMIFLPKFDPDAVLALMP--RATVMMGVPTFYTRLLQEPRLT 264 (504)
T ss_pred -------CCCccEEEEecchHHHHHHHHHHHHHHhcCcEEEECCCCCHHHHHHHHH--hheeeecHHHHHHHHHcCCCCC
Confidence 4789999999999999998 56788999999999998889999999994 7999999999999998876555
Q ss_pred CCCCCCeeEEEecCCCCCHHHHHHHHHhCCCCceeccccccccCCccccccCCCCCCCCCccccccCCceEEEEcCCCCc
Q 011116 248 KYDLSSLQLLGCGGAPLGKEVTLKFKEKFPNVEIRQGYGLTETGGAGSRVIGPDEAERHGSVGRLAELMEAKIVDPATGE 327 (493)
Q Consensus 248 ~~~l~~lr~v~~~Ge~~~~~~~~~~~~~~~~~~v~~~yG~tE~g~~~~~~~~~~~~~~~~~~g~p~~~~~~~i~d~~~~~ 327 (493)
...++++|.+++||+++++++.+.+.+.+ +.++++.||+||++..... .........++|.|.++++++++|+++++
T Consensus 265 ~~~~~~lr~~~~gg~~~~~~~~~~~~~~~-~~~~~~~YG~tE~~~~~~~--~~~~~~~~~~~G~~~~~~~v~i~d~~~~~ 341 (504)
T PRK07514 265 REAAAHMRLFISGSAPLLAETHREFQERT-GHAILERYGMTETNMNTSN--PYDGERRAGTVGFPLPGVSLRVTDPETGA 341 (504)
T ss_pred cccccceeeEEecCCCCCHHHHHHHHHHh-CCcceeecccccccccccC--CccccccCcccccCCCCcEEEEEECCCCC
Confidence 66678999999999999999999999988 7899999999999865432 22223345789999999999999989999
Q ss_pred cCCCCCceEEEEeCccccccccCCcccccccccCCCeeeccceEEEcCCCcEEEEcccCCeEEeCceeeChHHHHHHHhc
Q 011116 328 ALPPGQKGELWLRGPTIMKGYVGDDKATSETVHSEGWLKTGDLCYFDSNGFLFIVDRLKELIKYKAYQVPPVELEHLLHS 407 (493)
Q Consensus 328 ~~~~g~~Gel~v~~~~~~~gy~~~~~~~~~~~~~~~~~~TgD~~~~~~~g~~~~~GR~~d~i~~~G~~i~~~~ie~~l~~ 407 (493)
+++.|+.|||+++|+.++.||+++++.+.+.|..++||+|||+++++++|.+++.||.||+||.+|.++++.+||+++.+
T Consensus 342 ~~~~g~~Gel~i~~~~~~~gy~~~~~~~~~~~~~~~~~~TGDl~~~~~~g~~~~~GR~~~~i~~~G~~i~~~~IE~~l~~ 421 (504)
T PRK07514 342 ELPPGEIGMIEVKGPNVFKGYWRMPEKTAEEFRADGFFITGDLGKIDERGYVHIVGRGKDLIISGGYNVYPKEVEGEIDE 421 (504)
T ss_pred CCCCCCceEEEEecCCccccccCCchhhhhhcccCCCeeecceEEEcCCccEEEeccccceEEeCCeEECHHHHHHHHHh
Confidence 99999999999999999999999999999888878999999999999999999999999999999999999999999999
Q ss_pred CCCcceEEEEeeeCCCCCeeEEEEEEeCCCCCCCHHHHHHHHHhcCCCCCCcceEEEeccccCCCCCccchHHHHHHHhh
Q 011116 408 NPEIADAAVIPYPDEEAGQIPMAFVVRKPGSNITEAEIMDFIAKQVAPYKKIRRVAFINSIPKSTAGKILRRELVTHAIS 487 (493)
Q Consensus 408 ~~~v~~~~v~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~l~~~l~~~~~p~~~~~~~~lP~t~~GK~~r~~l~~~~~~ 487 (493)
+++|.++++++.+++..++.+++++++.++...+..++.++++++++++++|..+++++++|+|++||++|+.|++++.+
T Consensus 422 ~~~v~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~~~~p~~i~~v~~~p~t~~gK~~r~~l~~~~~~ 501 (504)
T PRK07514 422 LPGVVESAVIGVPHPDFGEGVTAVVVPKPGAALDEAAILAALKGRLARFKQPKRVFFVDELPRNTMGKVQKNLLREQYAD 501 (504)
T ss_pred CCCeeEEEEEeCCCCCcCceEEEEEEECCCCCCCHHHHHHHHHhhcccCCCCcEEEEeccCCCCCCcceeHHHHHHHHHh
Confidence 99999999999988777888999999887777788999999999999999999999999999999999999999998754
No 32
>PRK07656 long-chain-fatty-acid--CoA ligase; Validated
Probab=100.00 E-value=3e-63 Score=508.18 Aligned_cols=451 Identities=30% Similarity=0.504 Sum_probs=390.8
Q ss_pred hHHHHHHhhCCCCCCCEEEEECCCCCCcHHHHHHHHHHcCCeeccCCCCCCHHHHHHHHhhcCCeEEEEcCCCcccCCC-
Q 011116 18 TLSHALSKRDSLCRKTTSLTSSPLPPSTSPVLYFSLLSLGVVISPANPLSSTSEVSHQIQLSKPSIAFATSHTSYKLPS- 96 (493)
Q Consensus 18 ~lA~~L~~~~gl~~gd~V~l~~~~~~~~~~~~~lA~~~~G~~~v~i~~~~~~~~l~~~l~~~~~~~il~~~~~~~~~~~- 96 (493)
++|+.| .+.|+++||+|+++++ |+++++++++||+++|++++|+++..+.+.+..++++++++++++++.......+
T Consensus 42 ~~a~~L-~~~gv~~g~~V~l~~~-~~~~~~~~~la~~~~G~~~v~l~~~~~~~~~~~~l~~~~~~~ii~~~~~~~~~~~~ 119 (513)
T PRK07656 42 RAAAAL-AALGIGKGDRVAIWAP-NSPHWVIAALGALKAGAVVVPLNTRYTADEAAYILARGDAKALFVLGLFLGVDYSA 119 (513)
T ss_pred HHHHHH-HHcCCCCCCEEEEECC-CChHHHHHHHHHHhcCeEEEecCcccCHHHHHHHHhhcCceEEEEchhhHHHHHHH
Confidence 459999 7789999999999999 9999999999999999999999999999999999999999999998765443221
Q ss_pred -----CCc-EEEecC----------chhhhhhccCcccccccCCCCCCCCCCeEEEEccCCCCCCccceecchHHHHHHH
Q 011116 97 -----NLR-TILMDS----------PEFISLLNQNEDVADFANSNMTVYQSDPAAILYSSGTTGKVKGVLLSHLNVIAII 160 (493)
Q Consensus 97 -----~~~-~~~~~~----------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~TSGTTG~pK~v~~t~~~~~~~~ 160 (493)
... .+.... ..|..+..... ..........+++++++|||||||.||+|.++|.++...+
T Consensus 120 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~a~i~~TSGtTG~PK~v~~s~~~l~~~~ 195 (513)
T PRK07656 120 TTRLPALEHVVICETEEDDPHTEKMKTFTDFLAAGD----PAERAPEVDPDDVADILFTSGTTGRPKGAMLTHRQLLSNA 195 (513)
T ss_pred HhccCCccEEEEEcCcccccCccccccHHHHHhcCC----CCCCcCCCCCCceEEEEeCCCCCCCCCEEEEecHHHHHHH
Confidence 111 211111 12333333221 1122334577899999999999999999999999998888
Q ss_pred HHhhhhcccCCCCCCCCCCcEEEEecChhHHHHH-HHHHHHHhcCCeEEEecCCCHHHHHHHHHhcCeeecccChHHHHH
Q 011116 161 AGYYHVTEETDPNEGPPPHPVSFFTLPMFHVFGF-FMLVRAASKGETLVFMERFDFEKMLKAVENYRVTYMPVSPPLIVA 239 (493)
Q Consensus 161 ~~~~~~~~~~~~~~~~~~~~~~~~~~pl~~~~g~-~~~~~~l~~G~~~~~~~~~~~~~~~~~l~~~~~t~l~~~P~~~~~ 239 (493)
......+. ..+++++++.+|++|.+++ ..++.++..|+++++.+..+++.+++.++++++|++.++|+++..
T Consensus 196 ~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~l~~G~~~~~~~~~~~~~~~~~i~~~~~t~~~~~p~~~~~ 268 (513)
T PRK07656 196 ADWAEYLG-------LTEGDRYLAANPFFHVFGYKAGVNAPLMRGATILPLPVFDPDEVFRLIETERITVLPGPPTMYNS 268 (513)
T ss_pred HHHHHhhC-------CCCCCeEEEccchHHHHHHHHHHHHHHHcCceEEecCcCCHHHHHHHHHHhCCeEEechHHHHHH
Confidence 77666653 4789999999999999998 568899999999999888899999999999999999999999999
Q ss_pred HHhcccCCCCCCCCeeEEEecCCCCCHHHHHHHHHhCCCC-ceeccccccccCCccccccCCCC-CCCCCccccccCCce
Q 011116 240 FINSKLTDKYDLSSLQLLGCGGAPLGKEVTLKFKEKFPNV-EIRQGYGLTETGGAGSRVIGPDE-AERHGSVGRLAELME 317 (493)
Q Consensus 240 l~~~~~~~~~~l~~lr~v~~~Ge~~~~~~~~~~~~~~~~~-~v~~~yG~tE~g~~~~~~~~~~~-~~~~~~~g~p~~~~~ 317 (493)
+++........++++|.+++||+++++++.+++.+.| +. .+++.||+||+|++++.+..... .....++|.|+++++
T Consensus 269 l~~~~~~~~~~~~~l~~v~~~g~~~~~~~~~~~~~~~-~~~~~~~~YG~tE~~~~~~~~~~~~~~~~~~~~vG~~~~~~~ 347 (513)
T PRK07656 269 LLQHPDRSAEDLSSLRLAVTGAASMPVALLERFESEL-GVDIVLTGYGLSEASGVTTFNRLDDDRKTVAGTIGTAIAGVE 347 (513)
T ss_pred HHcCCCcCCCCccceeeEEecCCCCCHHHHHHHHHHc-CCCceEeEEccccCCCceeecCccccccccCCCccccCCCcE
Confidence 9988766666788999999999999999999999999 56 89999999999877665332211 112578999999999
Q ss_pred EEEEcCCCCccCCCCCceEEEEeCccccccccCCcccccccccCCCeeeccceEEEcCCCcEEEEcccCCeEEeCceeeC
Q 011116 318 AKIVDPATGEALPPGQKGELWLRGPTIMKGYVGDDKATSETVHSEGWLKTGDLCYFDSNGFLFIVDRLKELIKYKAYQVP 397 (493)
Q Consensus 318 ~~i~d~~~~~~~~~g~~Gel~v~~~~~~~gy~~~~~~~~~~~~~~~~~~TgD~~~~~~~g~~~~~GR~~d~i~~~G~~i~ 397 (493)
++++| +++++++.|+.|||+++|+.+..||++++..+...+..++||+|||+++++++|.+++.||.+|+++++|.+++
T Consensus 348 ~~i~d-~~~~~~~~g~~Gel~v~~~~~~~gy~~~~~~~~~~~~~~~~~~tGDl~~~~~~g~~~~~GR~~d~i~~~G~~v~ 426 (513)
T PRK07656 348 NKIVN-ELGEEVPVGEVGELLVRGPNVMKGYYDDPEATAAAIDADGWLHTGDLGRLDEEGYLYIVDRKKDMFIVGGFNVY 426 (513)
T ss_pred EEEEC-CCCCCCCCCCceEEEEEcchhhhhhcCCHHHHhhhhccCCceeccceEEEcCCeeEEEEecccceEEeCCEEeC
Confidence 99999 66899999999999999999999999999888888877899999999999999999999999999999999999
Q ss_pred hHHHHHHHhcCCCcceEEEEeeeCCCCCeeEEEEEEeCCCCCCCHHHHHHHHHhcCCCCCCcceEEEeccccCCCCCccc
Q 011116 398 PVELEHLLHSNPEIADAAVIPYPDEEAGQIPMAFVVRKPGSNITEAEIMDFIAKQVAPYKKIRRVAFINSIPKSTAGKIL 477 (493)
Q Consensus 398 ~~~ie~~l~~~~~v~~~~v~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~l~~~l~~~~~p~~~~~~~~lP~t~~GK~~ 477 (493)
+.+||++|.++++|.++++++.+++..++.+.++++..++...+.++++++++++|+++++|..+.+++++|+|++||++
T Consensus 427 ~~~iE~~l~~~~~i~~~~v~~~~~~~~g~~~~~~v~~~~~~~~~~~~l~~~~~~~l~~~~~p~~i~~v~~iP~t~~gK~~ 506 (513)
T PRK07656 427 PAEVEEVLYEHPAVAEAAVIGVPDERLGEVGKAYVVLKPGAELTEEELIAYCREHLAKYKVPRSIEFLDELPKNATGKVL 506 (513)
T ss_pred HHHHHHHHHhCCCeeEEEEEecCCcccCceEEEEEEECCCCCCCHHHHHHHHHhhcccccCCCEEEEecCCCCCCcccee
Confidence 99999999999999999999998888888899999988766788899999999999999999999999999999999999
Q ss_pred hHHHHH
Q 011116 478 RRELVT 483 (493)
Q Consensus 478 r~~l~~ 483 (493)
|+.|++
T Consensus 507 r~~l~~ 512 (513)
T PRK07656 507 KRALRE 512 (513)
T ss_pred HHHHhc
Confidence 999975
No 33
>PRK06145 acyl-CoA synthetase; Validated
Probab=100.00 E-value=4.3e-63 Score=504.64 Aligned_cols=454 Identities=26% Similarity=0.377 Sum_probs=387.5
Q ss_pred hHHHHHHhhCCCCCCCEEEEECCCCCCcHHHHHHHHHHcCCeeccCCCCCCHHHHHHHHhhcCCeEEEEcCCCcccCCCC
Q 011116 18 TLSHALSKRDSLCRKTTSLTSSPLPPSTSPVLYFSLLSLGVVISPANPLSSTSEVSHQIQLSKPSIAFATSHTSYKLPSN 97 (493)
Q Consensus 18 ~lA~~L~~~~gl~~gd~V~l~~~~~~~~~~~~~lA~~~~G~~~v~i~~~~~~~~l~~~l~~~~~~~il~~~~~~~~~~~~ 97 (493)
++|.+| .+.|+++|++|+++++ |+++++++++||+++|++++|+++..+.+++.++++.++++.++++++........
T Consensus 39 ~~a~~L-~~~g~~~~~~v~i~~~-~~~~~~~~~la~~~~G~~~v~l~~~~~~~~~~~~l~~~~~~~~i~~~~~~~~~~~~ 116 (497)
T PRK06145 39 QAAGML-HARGIGQGDVVALLMK-NSAAFLELAFAASYLGAVFLPINYRLAADEVAYILGDAGAKLLLVDEEFDAIVALE 116 (497)
T ss_pred HHHHHH-HHcCCCCCCEEEEECC-CCHHHHHHHHHHHhcCcEEEecccccCHHHHHHHHHhcCCcEEEEccchhhhhhcc
Confidence 359999 7789999999999999 99999999999999999999999999999999999999999999987654432211
Q ss_pred CcEEEecCc---hhhhhhccCcccccccCCCCCCCCCCeEEEEccCCCCCCccceecchHHHHHHHHHhhhhcccCCCCC
Q 011116 98 LRTILMDSP---EFISLLNQNEDVADFANSNMTVYQSDPAAILYSSGTTGKVKGVLLSHLNVIAIIAGYYHVTEETDPNE 174 (493)
Q Consensus 98 ~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~TSGTTG~pK~v~~t~~~~~~~~~~~~~~~~~~~~~~ 174 (493)
...+.++.. .+..+.... ..........++++++++|||||||.||+|.++|.++..........+
T Consensus 117 ~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~a~i~~TSGTTG~PK~v~~s~~~~~~~~~~~~~~~------- 185 (497)
T PRK06145 117 TPKIVIDAAAQADSRRLAQGG----LEIPPQAAVAPTDLVRLMYTSGTTDRPKGVMHSYGNLHWKSIDHVIAL------- 185 (497)
T ss_pred cceEEecCcccchhHHHhccC----CCCCCCCCCCccceEEEEeCCCCCCCCcEEEEecHHHHHHHHHHHHhh-------
Confidence 122222221 111111111 001112245678999999999999999999999999976655444444
Q ss_pred CCCCCcEEEEecChhHHHHH-HHHHHHHhcCCeEEEecCCCHHHHHHHHHhcCeeecccChHHHHHHHhcccCCCCCCCC
Q 011116 175 GPPPHPVSFFTLPMFHVFGF-FMLVRAASKGETLVFMERFDFEKMLKAVENYRVTYMPVSPPLIVAFINSKLTDKYDLSS 253 (493)
Q Consensus 175 ~~~~~~~~~~~~pl~~~~g~-~~~~~~l~~G~~~~~~~~~~~~~~~~~l~~~~~t~l~~~P~~~~~l~~~~~~~~~~l~~ 253 (493)
++..+++++...|++|.+++ ...+.++..|+++++.+.+++..+++.++++++|++.++|+++..++.........+++
T Consensus 186 ~~~~~~~~~~~~p~~~~~~~~~~~~~~l~~g~~~~~~~~~~~~~~~~~i~~~~~t~~~~~P~~~~~ll~~~~~~~~~~~~ 265 (497)
T PRK06145 186 GLTASERLLVVGPLYHVGAFDLPGIAVLWVGGTLRIHREFDPEAVLAAIERHRLTCAWMAPVMLSRVLTVPDRDRFDLDS 265 (497)
T ss_pred CCCCCcEEEEecCchhHhHHHHHHHHHHhccCEEEECCcCCHHHHHHHHHHhCCeEEEehHHHHHHHHcCCCcccccccc
Confidence 35788999999999999888 45677899999999988889999999999999999999999999998876655666789
Q ss_pred eeEEEecCCCCCHHHHHHHHHhCCCCceeccccccccCCccccccCCCCCCCCCccccccCCceEEEEcCCCCccCCCCC
Q 011116 254 LQLLGCGGAPLGKEVTLKFKEKFPNVEIRQGYGLTETGGAGSRVIGPDEAERHGSVGRLAELMEAKIVDPATGEALPPGQ 333 (493)
Q Consensus 254 lr~v~~~Ge~~~~~~~~~~~~~~~~~~v~~~yG~tE~g~~~~~~~~~~~~~~~~~~g~p~~~~~~~i~d~~~~~~~~~g~ 333 (493)
+|.+++||+++++++.+++.+.|++..+++.||+||++...+...........+++|+|.++++++++| ++++.++.|+
T Consensus 266 l~~~~~gG~~~~~~~~~~~~~~~~~~~v~~~YG~tE~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~i~~-~~~~~~~~~~ 344 (497)
T PRK06145 266 LAWCIGGGEKTPESRIRDFTRVFTRARYIDAYGLTETCSGDTLMEAGREIEKIGSTGRALAHVEIRIAD-GAGRWLPPNM 344 (497)
T ss_pred ceEEEecCCCCCHHHHHHHHHHcCCCceEEeecCcccCCcceeccCccccccCCCcccCCCCceEEEEC-CCCCCCCCCC
Confidence 999999999999999999999998889999999999987554322222223456899999999999999 5688899999
Q ss_pred ceEEEEeCccccccccCCcccccccccCCCeeeccceEEEcCCCcEEEEcccCCeEEeCceeeChHHHHHHHhcCCCcce
Q 011116 334 KGELWLRGPTIMKGYVGDDKATSETVHSEGWLKTGDLCYFDSNGFLFIVDRLKELIKYKAYQVPPVELEHLLHSNPEIAD 413 (493)
Q Consensus 334 ~Gel~v~~~~~~~gy~~~~~~~~~~~~~~~~~~TgD~~~~~~~g~~~~~GR~~d~i~~~G~~i~~~~ie~~l~~~~~v~~ 413 (493)
.|||+++|+.++.||+++++.+.+.| .++||+|||+++++++|++++.||.+|+||++|.++++.+||+.|.++++|.+
T Consensus 345 ~Gel~v~g~~~~~Gy~~~~~~~~~~~-~~~~~~TGDl~~~~~~g~l~~~GR~~~~i~~~G~~v~~~~IE~~l~~~~~v~~ 423 (497)
T PRK06145 345 KGEICMRGPKVTKGYWKDPEKTAEAF-YGDWFRSGDVGYLDEEGFLYLTDRKKDMIISGGENIASSEVERVIYELPEVAE 423 (497)
T ss_pred ceEEEEECcchhhhhcCChHHHHHHH-hCCCeeccceEEEcCCCcEEEeccccceEEeCCeEECHHHHHHHHHhCCCeeE
Confidence 99999999999999999999988887 47999999999999999999999999999999999999999999999999999
Q ss_pred EEEEeeeCCCCCeeEEEEEEeCCCCCCCHHHHHHHHHhcCCCCCCcceEEEeccccCCCCCccchHHHHHHHh
Q 011116 414 AAVIPYPDEEAGQIPMAFVVRKPGSNITEAEIMDFIAKQVAPYKKIRRVAFINSIPKSTAGKILRRELVTHAI 486 (493)
Q Consensus 414 ~~v~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~l~~~l~~~~~p~~~~~~~~lP~t~~GK~~r~~l~~~~~ 486 (493)
+++++..++..++.+.+++++.+....+.+++.++++++|+++++|..+.+++++|+|++||++|+.|++++.
T Consensus 424 ~~v~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~~~l~~~~~p~~i~~v~~iP~t~~GKi~r~~l~~~~~ 496 (497)
T PRK06145 424 AAVIGVHDDRWGERITAVVVLNPGATLTLEALDRHCRQRLASFKVPRQLKVRDELPRNPSGKVLKRVLRDELN 496 (497)
T ss_pred EEEEecCCCccCceEEEEEEECCCCCCCHHHHHHHHHHhhhcCCCCCEEEEeccCCCCCcccccHHHHHHHhc
Confidence 9999998888888899999988776778899999999999999999999999999999999999999999764
No 34
>TIGR03208 cyc_hxne_CoA_lg cyclohexanecarboxylate-CoA ligase. Members of this protein family are cyclohexanecarboxylate-CoA ligase. This enzyme prepares the aliphatic ring compound, cyclohexanecarboxylate, for dehydrogenation and then degradation by a pathway also used in benzoyl-CoA degradation in Rhodopseudomonas palustris.
Probab=100.00 E-value=8.8e-63 Score=506.60 Aligned_cols=452 Identities=26% Similarity=0.396 Sum_probs=381.8
Q ss_pred hHHHHHHhhCCCCCCCEEEEECCCCCCcHHHHHHHHHHcCCeeccCCCCCCHHHHHHHHhhcCCeEEEEcCCCcc-----
Q 011116 18 TLSHALSKRDSLCRKTTSLTSSPLPPSTSPVLYFSLLSLGVVISPANPLSSTSEVSHQIQLSKPSIAFATSHTSY----- 92 (493)
Q Consensus 18 ~lA~~L~~~~gl~~gd~V~l~~~~~~~~~~~~~lA~~~~G~~~v~i~~~~~~~~l~~~l~~~~~~~il~~~~~~~----- 92 (493)
++|.+| .+.|+++||+|+++++ |+++++++++||+++|++++|+++..+.+++.++++.++++++++++....
T Consensus 65 ~~a~~L-~~~g~~~g~~V~i~~~-~~~~~~~~~la~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~li~~~~~~~~~~~~ 142 (538)
T TIGR03208 65 RIAVGL-ARLGVGRGDVVSFQLP-NRWEFTALYLACARIGAVLNPLMPIFRERELSFMLNHADSKVFVVPSVFRGFDHAA 142 (538)
T ss_pred HHHHHH-HHcCCCCCCEEEEECC-CCHHHHHHHHHHHhcCEEEeccCcccCHHHHHHHHHhcCCeEEEEccccccccHHH
Confidence 359999 7789999999999999 999999999999999999999999999999999999999999999875421
Q ss_pred -------cCCCCCcEEEecCc---hhhhhhccCccccccc----CCCCCCCCCCeEEEEccCCCCCCccceecchHHHHH
Q 011116 93 -------KLPSNLRTILMDSP---EFISLLNQNEDVADFA----NSNMTVYQSDPAAILYSSGTTGKVKGVLLSHLNVIA 158 (493)
Q Consensus 93 -------~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~i~~TSGTTG~pK~v~~t~~~~~~ 158 (493)
.+.....++.++.. .+..++.......... .......++++++++|||||||.||+|.++|+++..
T Consensus 143 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~i~~TSGtTG~PK~v~~s~~~~~~ 222 (538)
T TIGR03208 143 MARELQSKLPALRQVVVIDGDGDDSFDRVLMTPERDDTPDAAAILAGPRPSPDDVTQLIYTSGTTGEPKGVMHTANTLFS 222 (538)
T ss_pred HHHHHhccCCcceEEEEecCCCCcCHHHHhhccccccccccccccccCCCCCCCeEEEEECCCCCCCCcEEEeehHHHHH
Confidence 01111123333321 2333322111000000 111235678999999999999999999999999988
Q ss_pred HHHHhhhhcccCCCCCCCCCCcEEEEecChhHHHHH-HHHHHHHhcCCeEEEecCCCHHHHHHHHHhcCeeecccChHHH
Q 011116 159 IIAGYYHVTEETDPNEGPPPHPVSFFTLPMFHVFGF-FMLVRAASKGETLVFMERFDFEKMLKAVENYRVTYMPVSPPLI 237 (493)
Q Consensus 159 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~pl~~~~g~-~~~~~~l~~G~~~~~~~~~~~~~~~~~l~~~~~t~l~~~P~~~ 237 (493)
.+......+. ...++++++.+|++|..++ ..++.++..|+++++.+.+++..+++.+++++++++.++|+++
T Consensus 223 ~~~~~~~~~~-------~~~~d~~l~~~pl~h~~g~~~~~~~~l~~g~~~~~~~~~~~~~~~~~l~~~~vt~~~~~p~~~ 295 (538)
T TIGR03208 223 NIHPYAERLE-------LGGGDVILMASPMAHQTGFMYGLMMPLILNATAVLQDIWNPARAAELIRETGVTFTMASTPFL 295 (538)
T ss_pred HHHHHHhhcC-------CCCCCeEEEeCCchhHHHHHHHHHHHHHcCCEEEecCccCHHHHHHHHHHhCCeEEecCHHHH
Confidence 8777766653 4788999999999999887 6788999999999998888999999999999999999999999
Q ss_pred HHHHhcccCCCCCCCCeeEEEecCCCCCHHHHHHHHHhCCCCceeccccccccCCccccccCCCCCCCCCccccccCCce
Q 011116 238 VAFINSKLTDKYDLSSLQLLGCGGAPLGKEVTLKFKEKFPNVEIRQGYGLTETGGAGSRVIGPDEAERHGSVGRLAELME 317 (493)
Q Consensus 238 ~~l~~~~~~~~~~l~~lr~v~~~Ge~~~~~~~~~~~~~~~~~~v~~~yG~tE~g~~~~~~~~~~~~~~~~~~g~p~~~~~ 317 (493)
..++.........++++|.+++||+++++++.+++.+.+ ++.+++.||+||++.+..............++|+|.++++
T Consensus 296 ~~l~~~~~~~~~~~~~l~~~~~gG~~~~~~~~~~~~~~~-~~~~~~~YG~tE~~~~~~~~~~~~~~~~~~~~G~~~~g~~ 374 (538)
T TIGR03208 296 TDLCRAVKESGAPVPSLFTFLCAGAPIPGILVERAWELL-GALIVSAWGMTENGAVTVTEPDDALEKASTTDGRPLPGVE 374 (538)
T ss_pred HHHHhchhccCCCCCcceEEEEcCCCCCHHHHHHHHHHc-CCeEEeeeccCcCCCccccCcccchhhccCcccccCCCCE
Confidence 998876544455678999999999999999999999988 7999999999999876654322211223457899999999
Q ss_pred EEEEcCCCCccCCCCCceEEEEeCccccccccCCcccccccccCCCeeeccceEEEcCCCcEEEEcccCCeEEeCceeeC
Q 011116 318 AKIVDPATGEALPPGQKGELWLRGPTIMKGYVGDDKATSETVHSEGWLKTGDLCYFDSNGFLFIVDRLKELIKYKAYQVP 397 (493)
Q Consensus 318 ~~i~d~~~~~~~~~g~~Gel~v~~~~~~~gy~~~~~~~~~~~~~~~~~~TgD~~~~~~~g~~~~~GR~~d~i~~~G~~i~ 397 (493)
++|+| +++++++.|+.|||+++|+.++.||+++++.+. .+.++||+|||+++++++|.+++.||.+|+|+.+|++|+
T Consensus 375 v~i~~-~~~~~~~~g~~Gel~v~g~~~~~gy~~~~~~~~--~~~~~~~~TGD~~~~~~~g~l~~~gR~~~~i~~~G~~v~ 451 (538)
T TIGR03208 375 VKVID-ANGAKLSQGETGRLLVRGCSNFGGYLKRPHLNS--TDAEGWFDTGDLAFQDAEGYIRINGRSKDVIIRGGENIP 451 (538)
T ss_pred EEEEC-CCCCCCcCCCCcEEEEecCcccccccCCccccc--ccCCCceeccceEEECCCCcEEEEeccCceEEECCEEEC
Confidence 99999 668889999999999999999999999988764 346899999999999999999999999999999999999
Q ss_pred hHHHHHHHhcCCCcceEEEEeeeCCCCCeeEEEEEEeCCCCCCCHHHHHHHHHh-cCCCCCCcceEEEeccccCCCCCcc
Q 011116 398 PVELEHLLHSNPEIADAAVIPYPDEEAGQIPMAFVVRKPGSNITEAEIMDFIAK-QVAPYKKIRRVAFINSIPKSTAGKI 476 (493)
Q Consensus 398 ~~~ie~~l~~~~~v~~~~v~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~l~~-~l~~~~~p~~~~~~~~lP~t~~GK~ 476 (493)
|.+||.+|.++|+|.+++|++.+++..++.+.+++++.++...+.+++.+++++ +++.+++|..+++++++|+|++||+
T Consensus 452 p~eIE~~l~~~~~v~~~~v~~~~~~~~g~~~~a~v~~~~~~~~~~~~l~~~~~~~~l~~~~~P~~i~~v~~iP~t~~gKv 531 (538)
T TIGR03208 452 VVEIENLLYQHPAVAQVAIVAYPDERLGERACAVVVPKPGCTLDFAAMVAFLKAQKVALQYIPERLEVVDALPATPAGKI 531 (538)
T ss_pred HHHHHHHHhcCcceeeEEEEeccCCCCCceEEEEEEECCCCCCCHHHHHHHHHhcchhhccCCcEEEEeccCCCCCcccc
Confidence 999999999999999999999988878889999999987767788899999985 7999999999999999999999999
Q ss_pred chHHHH
Q 011116 477 LRRELV 482 (493)
Q Consensus 477 ~r~~l~ 482 (493)
+|+.|+
T Consensus 532 ~r~~L~ 537 (538)
T TIGR03208 532 QKFRLR 537 (538)
T ss_pred chHhhc
Confidence 999986
No 35
>PRK09274 peptide synthase; Provisional
Probab=100.00 E-value=1.5e-63 Score=514.07 Aligned_cols=451 Identities=24% Similarity=0.338 Sum_probs=365.4
Q ss_pred HHHHHHhhCCCCCCCEEEEECCCCCCcHHHHHHHHHHcCCeeccCCCCCCHHHHHHHHhhcCCeEEEEcCC--CcccCC-
Q 011116 19 LSHALSKRDSLCRKTTSLTSSPLPPSTSPVLYFSLLSLGVVISPANPLSSTSEVSHQIQLSKPSIAFATSH--TSYKLP- 95 (493)
Q Consensus 19 lA~~L~~~~gl~~gd~V~l~~~~~~~~~~~~~lA~~~~G~~~v~i~~~~~~~~l~~~l~~~~~~~il~~~~--~~~~~~- 95 (493)
+|++| .+.|+++||+|+++++ |+++++++++||+++|++++|++|.++.+++.+++++++++++++++. ....+.
T Consensus 54 ~A~~L-~~~g~~~gd~V~~~~~-n~~~~~~~~la~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~~i~~~~~~~~~~~~~ 131 (552)
T PRK09274 54 IAHGL-NAAGIGRGMRAVLMVT-PSLEFFALTFALFKAGAVPVLVDPGMGIKNLKQCLAEAQPDAFIGIPKAHLARRLFG 131 (552)
T ss_pred HHHHH-HHcCCCCCCEEEEEeC-CcHHHHHHHHHHHHcCeEEEEcCCCccHHHHHHHHHhcCCCEEEeccHHHHHHHHhc
Confidence 49999 7789999999999999 999999999999999999999999999999999999999999999652 111111
Q ss_pred ----CCCcEEEecC------chhhhhhccCcccccccCCCCCCCCCCeEEEEccCCCCCCccceecchHHHHHHHHHhhh
Q 011116 96 ----SNLRTILMDS------PEFISLLNQNEDVADFANSNMTVYQSDPAAILYSSGTTGKVKGVLLSHLNVIAIIAGYYH 165 (493)
Q Consensus 96 ----~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~TSGTTG~pK~v~~t~~~~~~~~~~~~~ 165 (493)
.....+.++. ..+.++..... ..........++++++++|||||||.||+|.++|.++...+.....
T Consensus 132 ~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~a~i~~TSGTTG~PK~v~~s~~~l~~~~~~~~~ 208 (552)
T PRK09274 132 WGKPSVRRLVTVGGRLLWGGTTLATLLRDGA---AAPFPMADLAPDDMAAILFTSGSTGTPKGVVYTHGMFEAQIEALRE 208 (552)
T ss_pred cCccchhheeccccccccCCccHHHhcccCc---cccCCCCCCCCCCeEEEEECCCCCCCCceEEecHHHHHHHHHHHHH
Confidence 0111222221 12333321111 1011223456789999999999999999999999999988877766
Q ss_pred hcccCCCCCCCCCCcEEEEecChhHHHHHHHHHHHHhcCCeEEEec-------CCCHHHHHHHHHhcCeeecccChHHHH
Q 011116 166 VTEETDPNEGPPPHPVSFFTLPMFHVFGFFMLVRAASKGETLVFME-------RFDFEKMLKAVENYRVTYMPVSPPLIV 238 (493)
Q Consensus 166 ~~~~~~~~~~~~~~~~~~~~~pl~~~~g~~~~~~~l~~G~~~~~~~-------~~~~~~~~~~l~~~~~t~l~~~P~~~~ 238 (493)
.+. +.++++.+...|++|.+++ ..|+++++.+ ..+++.+++.++++++|+++++|+++.
T Consensus 209 ~~~-------~~~~~~~~~~~pl~~~~~~-------~~g~~~~~~~~~~~~~~~~~~~~~~~~i~~~~vt~~~~~P~~~~ 274 (552)
T PRK09274 209 DYG-------IEPGEIDLPTFPLFALFGP-------ALGMTSVIPDMDPTRPATVDPAKLFAAIERYGVTNLFGSPALLE 274 (552)
T ss_pred HhC-------CCCCceeeeccCHHHhhhh-------hhCCeEEecCcccccccccCHHHHHHHHHHcCCeEEeccHHHHH
Confidence 653 4788999999999876543 4577777653 357899999999999999999999999
Q ss_pred HHHhcccCCCCCCCCeeEEEecCCCCCHHHHHHHHHhCC-CCceeccccccccCCccccccCC------C--CCCCCCcc
Q 011116 239 AFINSKLTDKYDLSSLQLLGCGGAPLGKEVTLKFKEKFP-NVEIRQGYGLTETGGAGSRVIGP------D--EAERHGSV 309 (493)
Q Consensus 239 ~l~~~~~~~~~~l~~lr~v~~~Ge~~~~~~~~~~~~~~~-~~~v~~~yG~tE~g~~~~~~~~~------~--~~~~~~~~ 309 (493)
.|++.......+++++|.+++||+++++++.+++++.|+ ++++++.||+||++.+.+..... . ......++
T Consensus 275 ~l~~~~~~~~~~~~~lr~~~~gG~~~~~~~~~~~~~~~~~~~~~~~~YG~TE~~~~~~~~~~~~~~~~~~~~~~~~~~~v 354 (552)
T PRK09274 275 RLGRYGEANGIKLPSLRRVISAGAPVPIAVIERFRAMLPPDAEILTPYGATEALPISSIESREILFATRAATDNGAGICV 354 (552)
T ss_pred HHHHHhhhcCCCCchhhEEEecCCcCCHHHHHHHHHHcCCCceEEccccccccceeEeecchhhhccccccccCCCCccc
Confidence 998876655667899999999999999999999999996 47999999999998755432111 0 01122368
Q ss_pred ccccCCceEEEEcCC--------CCccCCCCCceEEEEeCccccccccCCcccccccc--cCCC--eeeccceEEEcCCC
Q 011116 310 GRLAELMEAKIVDPA--------TGEALPPGQKGELWLRGPTIMKGYVGDDKATSETV--HSEG--WLKTGDLCYFDSNG 377 (493)
Q Consensus 310 g~p~~~~~~~i~d~~--------~~~~~~~g~~Gel~v~~~~~~~gy~~~~~~~~~~~--~~~~--~~~TgD~~~~~~~g 377 (493)
|+|+++++++|+|++ ++++++.|+.|||+++|+.++.||+++++.+...+ +.+| ||+|||+|+++++|
T Consensus 355 G~~~~~~~~~ivd~~~~~~~~~~~~~~~~~g~~Gel~v~g~~~~~GY~~~~~~t~~~~~~~~~g~~w~~TGDlg~~d~dG 434 (552)
T PRK09274 355 GRPVDGVEVRIIAISDAPIPEWDDALRLATGEIGEIVVAGPMVTRSYYNRPEATRLAKIPDGQGDVWHRMGDLGYLDAQG 434 (552)
T ss_pred CccCCCceEEEEeccccccccccccccCCCCCeeEEEEecCcccccccCChHHhhhhhcccCCCCcEEEcCCEEEEccCC
Confidence 999999999999853 46788999999999999999999999998887765 3356 99999999999999
Q ss_pred cEEEEcccCCeEEeCceeeChHHHHHHHhcCCCcceEEEEeeeCCCCCeeEEEEEEeCCCCCCCHHHHHHHHHhcCCCC-
Q 011116 378 FLFIVDRLKELIKYKAYQVPPVELEHLLHSNPEIADAAVIPYPDEEAGQIPMAFVVRKPGSNITEAEIMDFIAKQVAPY- 456 (493)
Q Consensus 378 ~~~~~GR~~d~i~~~G~~i~~~~ie~~l~~~~~v~~~~v~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~l~~~l~~~- 456 (493)
.+++.||.+|+||++|.+|+|.+||++|.+||+|.++++++.+++ .++.++++|++.++...+..++.+++++.+..+
T Consensus 435 ~l~~~GR~~d~i~~~G~~v~p~eIE~~l~~~p~V~~~~v~~~~~~-~~~~~~~~v~~~~~~~~~~~~l~~~l~~~l~~~~ 513 (552)
T PRK09274 435 RLWFCGRKAHRVETAGGTLYTIPCERIFNTHPGVKRSALVGVGVP-GAQRPVLCVELEPGVACSKSALYQELRALAAAHP 513 (552)
T ss_pred cEEEEeccCCeEEECCEEECcHHHHHHHHhCcccceeEEEEeCCC-CCceEEEEEEccCccccchHHHhhhhHHHHHhcC
Confidence 999999999999999999999999999999999999999999876 466788888888776666666666766655544
Q ss_pred --CCcceEEEeccccCC--CCCccchHHHHHHHhhCC
Q 011116 457 --KKIRRVAFINSIPKS--TAGKILRRELVTHAISGN 489 (493)
Q Consensus 457 --~~p~~~~~~~~lP~t--~~GK~~r~~l~~~~~~~~ 489 (493)
+.|..+.++++||+| ++||++|+.|++++.++.
T Consensus 514 ~~~~~~~~~~~~~lP~t~~~~GKi~r~~L~~~~~~~~ 550 (552)
T PRK09274 514 HTAGIERFLIHPSFPVDIRHNAKIFREKLAVWAAKQL 550 (552)
T ss_pred CCcceeEEeccCCCCccccccccccHHHHHHHHHHhh
Confidence 567889999999999 799999999999988764
No 36
>PRK05605 long-chain-fatty-acid--CoA ligase; Validated
Probab=100.00 E-value=6.9e-63 Score=511.24 Aligned_cols=460 Identities=28% Similarity=0.432 Sum_probs=387.1
Q ss_pred HHHHHHhhCCCCCCCEEEEECCCCCCcHHHHHHHHHHcCCeeccCCCCCCHHHHHHHHhhcCCeEEEEcCCCcccCCC--
Q 011116 19 LSHALSKRDSLCRKTTSLTSSPLPPSTSPVLYFSLLSLGVVISPANPLSSTSEVSHQIQLSKPSIAFATSHTSYKLPS-- 96 (493)
Q Consensus 19 lA~~L~~~~gl~~gd~V~l~~~~~~~~~~~~~lA~~~~G~~~v~i~~~~~~~~l~~~l~~~~~~~il~~~~~~~~~~~-- 96 (493)
+|++| .+.|+++||+|+++++ |+++++++++||+++|++++|++|.++.+++.+++++++++++++++.....+.+
T Consensus 70 ~A~~L-~~~gi~~gd~V~l~~~-n~~~~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~~~~ 147 (573)
T PRK05605 70 AAAGL-RALGVRPGDRVAIVLP-NCPQHIVAFYAVLRLGAVVVEHNPLYTAHELEHPFEDHGARVAIVWDKVAPTVERLR 147 (573)
T ss_pred HHHHH-HHhCCCCCCEEEEECC-CCHHHHHHHHHHHhcCcEEeecCcCCCHHHHHHHHhccCCcEEEechhhHHHHHhhh
Confidence 49999 7789999999999999 9999999999999999999999999999999999999999999997654332211
Q ss_pred ---CCc-EEEec---------------------------------CchhhhhhccCcccccccCCCCCCCCCCeEEEEcc
Q 011116 97 ---NLR-TILMD---------------------------------SPEFISLLNQNEDVADFANSNMTVYQSDPAAILYS 139 (493)
Q Consensus 97 ---~~~-~~~~~---------------------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~T 139 (493)
... ++.++ ...|..+...................+++++++||
T Consensus 148 ~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~i~~T 227 (573)
T PRK05605 148 RTTPLETIVSVNMIAAMPLLQRLALRLPIPALRKARAALTGPAPGTVPWETLVDAAIGGDGSDVSHPRPTPDDVALILYT 227 (573)
T ss_pred hccccceeEeeecccccccccccccccccccccccccccccCCCcceeHHHHhhccccccccccCCCCCCCCCEEEEEcC
Confidence 111 11111 01122222111000000011223557899999999
Q ss_pred CCCCCCccceecchHHHHHHHHHhhhhcccCCCCCCCCCCcEEEEecChhHHHHH-HHHHHHHhcCCeEEEecCCCHHHH
Q 011116 140 SGTTGKVKGVLLSHLNVIAIIAGYYHVTEETDPNEGPPPHPVSFFTLPMFHVFGF-FMLVRAASKGETLVFMERFDFEKM 218 (493)
Q Consensus 140 SGTTG~pK~v~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pl~~~~g~-~~~~~~l~~G~~~~~~~~~~~~~~ 218 (493)
|||||.||+|.++|.++...+......+.. .....+++++.+|++|.+|+ ..++.++..|+++++.+..+++.+
T Consensus 228 SGTTG~PK~v~~s~~~l~~~~~~~~~~~~~-----~~~~~~~~~~~~p~~~~~g~~~~~~~~l~~g~~~~~~~~~~~~~~ 302 (573)
T PRK05605 228 SGTTGKPKGAQLTHRNLFANAAQGKAWVPG-----LGDGPERVLAALPMFHAYGLTLCLTLAVSIGGELVLLPAPDIDLI 302 (573)
T ss_pred CCCCCCCcEEEEecHHHHHHHHHHHhhccc-----cCCCCcEEEEecChHHHHHHHHHHHHHHHcCCEEEEeCCCCHHHH
Confidence 999999999999999998776654433311 01347899999999999998 557778999999999888899999
Q ss_pred HHHHHhcCeeecccChHHHHHHHhcccCCCCCCCCeeEEEecCCCCCHHHHHHHHHhCCCCceeccccccccCCcccccc
Q 011116 219 LKAVENYRVTYMPVSPPLIVAFINSKLTDKYDLSSLQLLGCGGAPLGKEVTLKFKEKFPNVEIRQGYGLTETGGAGSRVI 298 (493)
Q Consensus 219 ~~~l~~~~~t~l~~~P~~~~~l~~~~~~~~~~l~~lr~v~~~Ge~~~~~~~~~~~~~~~~~~v~~~yG~tE~g~~~~~~~ 298 (493)
++.++++++|++.++|++++.|++........++++|.+++||+++++++.+.+.+.+ ++.+++.||+||+++++....
T Consensus 303 ~~~l~~~~~t~~~~~P~~~~~l~~~~~~~~~~~~~lr~i~~gg~~l~~~~~~~~~~~~-~~~i~~~YG~TE~~~~~~~~~ 381 (573)
T PRK05605 303 LDAMKKHPPTWLPGVPPLYEKIAEAAEERGVDLSGVRNAFSGAMALPVSTVELWEKLT-GGLLVEGYGLTETSPIIVGNP 381 (573)
T ss_pred HHHHHHhCCEEEEchHHHHHHHHhCccccCCCchhccEEEECCCcCCHHHHHHHHHHh-CCCeecccccchhchhhhcCC
Confidence 9999999999999999999999987766667788999999999999999999999988 789999999999987665432
Q ss_pred CCCCCCCCCccccccCCceEEEEcCCC-CccCCCCCceEEEEeCccccccccCCcccccccccCCCeeeccceEEEcCCC
Q 011116 299 GPDEAERHGSVGRLAELMEAKIVDPAT-GEALPPGQKGELWLRGPTIMKGYVGDDKATSETVHSEGWLKTGDLCYFDSNG 377 (493)
Q Consensus 299 ~~~~~~~~~~~g~p~~~~~~~i~d~~~-~~~~~~g~~Gel~v~~~~~~~gy~~~~~~~~~~~~~~~~~~TgD~~~~~~~g 377 (493)
.......+++|.|.+++.++|+|+++ +.+++.|+.|||+++|+.++.||+++++.+...|. +|||+|||+++++++|
T Consensus 382 -~~~~~~~~~~G~~~~~~~~~i~d~~~~~~~~~~g~~Gel~v~~~~~~~gy~~~~~~~~~~~~-~g~~~TGD~~~~~~~g 459 (573)
T PRK05605 382 -MSDDRRPGYVGVPFPDTEVRIVDPEDPDETMPDGEEGELLVRGPQVFKGYWNRPEETAKSFL-DGWFRTGDVVVMEEDG 459 (573)
T ss_pred -cccCCcCCccccCCCCCEEEEEcCCCCCccCCCCCeeEEEEecCchhhhhcCChhHhhhccc-CCCcccCCEEEEcCCC
Confidence 22233457899999999999999776 68899999999999999999999999999888884 6799999999999999
Q ss_pred cEEEEcccCCeEEeCceeeChHHHHHHHhcCCCcceEEEEeeeCCCCCeeEEEEEEeCCCCCCCHHHHHHHHHhcCCCCC
Q 011116 378 FLFIVDRLKELIKYKAYQVPPVELEHLLHSNPEIADAAVIPYPDEEAGQIPMAFVVRKPGSNITEAEIMDFIAKQVAPYK 457 (493)
Q Consensus 378 ~~~~~GR~~d~i~~~G~~i~~~~ie~~l~~~~~v~~~~v~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~l~~~l~~~~ 457 (493)
++++.||.||+++.+|.+|+|.+||+++..++.|.++++++.+++..++.+++++++.++...+.++++++++++|+.++
T Consensus 460 ~l~i~gR~dd~i~~~G~~v~p~eIE~~l~~~~~i~~~~v~~~~~~~~~~~~~~~vv~~~~~~~~~~~l~~~~~~~l~~~~ 539 (573)
T PRK05605 460 FIRIVDRIKELIITGGFNVYPAEVEEVLREHPGVEDAAVVGLPREDGSEEVVAAVVLEPGAALDPEGLRAYCREHLTRYK 539 (573)
T ss_pred cEEEEeccccceeeCCEEECHHHHHHHHHhCcccceEEEEeeecccCCeEEEEEEEECCCCCCCHHHHHHHHHHhCcccc
Confidence 99999999999999999999999999999999999999999988888889999999887777888999999999999999
Q ss_pred CcceEEEeccccCCCCCccchHHHHHHHhhC
Q 011116 458 KIRRVAFINSIPKSTAGKILRRELVTHAISG 488 (493)
Q Consensus 458 ~p~~~~~~~~lP~t~~GK~~r~~l~~~~~~~ 488 (493)
+|..+++++++|+|++||++|+.|++++.+.
T Consensus 540 ~p~~i~~~~~iP~t~~GKi~r~~L~~~~~~~ 570 (573)
T PRK05605 540 VPRRFYHVDELPRDQLGKVRRREVREELLEK 570 (573)
T ss_pred CCcEEEEeccCCCCCcccccHHHHHHHHHHH
Confidence 9999999999999999999999999998654
No 37
>KOG1175 consensus Acyl-CoA synthetase [Lipid transport and metabolism]
Probab=100.00 E-value=1.5e-63 Score=488.35 Aligned_cols=461 Identities=26% Similarity=0.363 Sum_probs=389.7
Q ss_pred hhHHHHHHhhCCCCCCCEEEEECCCCCCcHHHHHHHHHHcCCeeccCCCCCCHHHHHHHHhhcCCeEEEEcCCCcccCCC
Q 011116 17 FTLSHALSKRDSLCRKTTSLTSSPLPPSTSPVLYFSLLSLGVVISPANPLSSTSEVSHQIQLSKPSIAFATSHTSYKLPS 96 (493)
Q Consensus 17 ~~lA~~L~~~~gl~~gd~V~l~~~~~~~~~~~~~lA~~~~G~~~v~i~~~~~~~~l~~~l~~~~~~~il~~~~~~~~~~~ 96 (493)
.++|..| .+.|+++||+|++++| +.++++++++||+++|++.+++-..++++++...++.++++++++.+......+.
T Consensus 107 ~~~a~~l-~~~g~~kGD~V~~~mP-m~~e~~ia~lA~~r~Gai~~~v~~~fs~~~l~~Rl~~~~~k~i~t~d~~~~~~k~ 184 (626)
T KOG1175|consen 107 VRLANVL-RKCGLKKGDTVAIYMP-MIPEAVIAMLACARIGAIHSSVFAGFSAKELLDRLQDSKAKVIITQDVVARGGKS 184 (626)
T ss_pred HHHHHHH-HhcCCCCCcEEEEecc-CChHHHHHHHHHhhcCeEEEEeeccCCHHHHHHHHHhcCCCEEEEEeeeccCCCc
Confidence 3458999 5899999999999999 9999999999999999999999999999999999999999999999765553331
Q ss_pred --------------------CCcEEEec----CchhhhhhccCcccccccCCCCCCCCCCeEEEEccCCCCCCccceecc
Q 011116 97 --------------------NLRTILMD----SPEFISLLNQNEDVADFANSNMTVYQSDPAAILYSSGTTGKVKGVLLS 152 (493)
Q Consensus 97 --------------------~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~TSGTTG~pK~v~~t 152 (493)
....+.+. +..|...+... .+.......+.+|+.+|+|||||||.||++.++
T Consensus 185 i~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~a----~~~~~~~~~~~edpl~IlfTSGtTg~PK~v~ht 260 (626)
T KOG1175|consen 185 INLKCIVLEALLLVSDKSRPVWLDLIVSRRNRDLFWSLELKKA----SPEHPCVPVKAEDPLFILFTSGTTGKPKGVIHT 260 (626)
T ss_pred cchhhhHHHHhhcccccccccceeeEEecccccccHHHHhhhc----CCCCCceecCccCceEEEecCCCCCCCCceeec
Confidence 00011111 11233333332 223346788899999999999999999999999
Q ss_pred hHHHHHHHHHhhhhcccCCCCCCCCCCcEEEEecChhHHHHH-HHHHHHHhcCCeEEEec--CCCHHHHHHHHHhcCeee
Q 011116 153 HLNVIAIIAGYYHVTEETDPNEGPPPHPVSFFTLPMFHVFGF-FMLVRAASKGETLVFME--RFDFEKMLKAVENYRVTY 229 (493)
Q Consensus 153 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pl~~~~g~-~~~~~~l~~G~~~~~~~--~~~~~~~~~~l~~~~~t~ 229 (493)
+.............+ .+++++|+++++..+.|+.+. +..+++|+.|+++++.+ ++++..+++.+.++++|+
T Consensus 261 ~~g~ll~~~~~~~~~------~d~q~~dv~~~~~d~GWi~g~~~~~~gpl~~Ga~~vl~~g~p~~~~~~~~~v~k~~it~ 334 (626)
T KOG1175|consen 261 TGGYLLGAALTSRYH------FDLQPSDVLWCASDLGWITGHSYVLYGPLLNGATVVLYEGPPFDPGRIWKILDKYKVTV 334 (626)
T ss_pred cCcchHHHhhhccee------ccCCCcceEEEecccCeeeccchhhhhhhhcCcEEEEEcCCCCChhhhhhhHhhcceEE
Confidence 887765554433332 256999999999999999998 56888999999999984 458999999999999999
Q ss_pred cccChHHHHHHHhcccCC--CCCCCCeeEEEecCCCCCHHHHHHHHHhCCCCceeccccccccCCccccccCCCCCCCCC
Q 011116 230 MPVSPPLIVAFINSKLTD--KYDLSSLQLLGCGGAPLGKEVTLKFKEKFPNVEIRQGYGLTETGGAGSRVIGPDEAERHG 307 (493)
Q Consensus 230 l~~~P~~~~~l~~~~~~~--~~~l~~lr~v~~~Ge~~~~~~~~~~~~~~~~~~v~~~yG~tE~g~~~~~~~~~~~~~~~~ 307 (493)
+++.|+.++.|.+..... ..++++||.+.++||++.++.++++.+.+...+|++.||+||+|..+..+........++
T Consensus 335 l~t~pt~~r~l~~~~~~~~~~~~~~sLk~~~S~Gepi~~~~~ew~~~~~~~~pv~e~~~qtEtG~~~i~~~~g~~p~~pg 414 (626)
T KOG1175|consen 335 LYTAPTAYRLLRRLGQEDVTSYSLKSLRTCGSVGEPINPEAWEWWKRVTGLDPIYETYGQTETGGICITPKPGKLPIKPG 414 (626)
T ss_pred EEeccHHHHHHHHhccccccccccceEEEEeecCccCCcchHHHHHHhcCccchhhceeeeccCceeeeccCCCCCcCcc
Confidence 999999999887765433 344467999999999999999999999993336999999999999877643332246789
Q ss_pred ccccccCCceEEEEcCCCCccCCCC-CceEEEEeCc---cccccccCCcccccccccC--CCeeeccceEEEcCCCcEEE
Q 011116 308 SVGRLAELMEAKIVDPATGEALPPG-QKGELWLRGP---TIMKGYVGDDKATSETVHS--EGWLKTGDLCYFDSNGFLFI 381 (493)
Q Consensus 308 ~~g~p~~~~~~~i~d~~~~~~~~~g-~~Gel~v~~~---~~~~gy~~~~~~~~~~~~~--~~~~~TgD~~~~~~~g~~~~ 381 (493)
+.+.|.+++.+.|+| ++|+.++++ +.|+|+++.+ +.+++|+++++.....+.. .|||.|||.+++|+||++++
T Consensus 415 ~~~~p~~g~~v~i~d-e~g~~~~~~~~~G~l~~~~~~P~~~~r~~~~n~erf~~~yf~k~pg~y~tGD~~~rd~dGY~~i 493 (626)
T KOG1175|consen 415 SAGKPFPGYDVQILD-ENGNELPPSTGNGELRLKPPWPPGMFRTLWGNHERFRAAYFKKFPGYYFTGDGGRRDEDGYYWI 493 (626)
T ss_pred ccCCCCCCcceEEEC-CCCCCcCCCCceeEEEEeCCCCccccccccCCHHHhhhhhcccCCceEEecCceEEcCCceEEE
Confidence 999999999999999 588888876 8999999984 7789999999866655544 68999999999999999999
Q ss_pred EcccCCeEEeCceeeChHHHHHHHhcCCCcceEEEEeeeCCCCCeeEEEEEEeCCCCCCCH---HHHHHHHHhcCCCCCC
Q 011116 382 VDRLKELIKYKAYQVPPVELEHLLHSNPEIADAAVIPYPDEEAGQIPMAFVVRKPGSNITE---AEIMDFIAKQVAPYKK 458 (493)
Q Consensus 382 ~GR~~d~i~~~G~~i~~~~ie~~l~~~~~v~~~~v~~~~~~~~~~~~~~~v~~~~~~~~~~---~~l~~~l~~~l~~~~~ 458 (493)
.||.||+|+++|.++++.|||+++.+||.|.|++||+.+++..||.+++|+++.++....+ .+|+.++++.+.++..
T Consensus 494 ~GR~DDviNvsGhRigtaEIE~al~~hp~VaEsAvVg~p~~~~ge~v~aFvvl~~g~~~~~~L~kel~~~VR~~igp~a~ 573 (626)
T KOG1175|consen 494 LGRVDDVINVSGHRIGTAEIESALVEHPAVAESAVVGSPDPIKGEVVLAFVVLKSGSHDPEQLTKELVKHVRSVIGPYAV 573 (626)
T ss_pred EecccccccccceeecHHHHHHHHhhCcchhheeeecCCCCCCCeEEEEEEEEcCCCCChHHHHHHHHHHHHhhcCcccc
Confidence 9999999999999999999999999999999999999999999999999999999844443 6788888889999999
Q ss_pred cceEEEeccccCCCCCccchHHHHHHHhhCCC
Q 011116 459 IRRVAFINSIPKSTAGKILRRELVTHAISGNL 490 (493)
Q Consensus 459 p~~~~~~~~lP~t~~GK~~r~~l~~~~~~~~~ 490 (493)
|+.|+++++||+|.|||+.|+.||+.+..++.
T Consensus 574 P~~I~~v~~LPkTrSGKimRr~lrki~~g~~~ 605 (626)
T KOG1175|consen 574 PRLIVFVPGLPKTRSGKIMRRALRKIASGKAV 605 (626)
T ss_pred cceeEecCCCCccccchhHHHHHHHHhccCcc
Confidence 99999999999999999999999999988754
No 38
>PRK06155 crotonobetaine/carnitine-CoA ligase; Provisional
Probab=100.00 E-value=1.6e-62 Score=504.01 Aligned_cols=452 Identities=26% Similarity=0.369 Sum_probs=385.4
Q ss_pred hHHHHHHhhCCCCCCCEEEEECCCCCCcHHHHHHHHHHcCCeeccCCCCCCHHHHHHHHhhcCCeEEEEcCCCcccCCC-
Q 011116 18 TLSHALSKRDSLCRKTTSLTSSPLPPSTSPVLYFSLLSLGVVISPANPLSSTSEVSHQIQLSKPSIAFATSHTSYKLPS- 96 (493)
Q Consensus 18 ~lA~~L~~~~gl~~gd~V~l~~~~~~~~~~~~~lA~~~~G~~~v~i~~~~~~~~l~~~l~~~~~~~il~~~~~~~~~~~- 96 (493)
++|++| .+.|+++|++|+++++ |+++++++++||+++|++++|+++.++.+++..+++++++++++++.+....+.+
T Consensus 58 ~la~~L-~~~gi~~g~~V~v~~~-n~~~~~~~~lA~~~~G~~~vpl~~~~~~~~l~~~l~~~~~~~l~~~~~~~~~~~~~ 135 (542)
T PRK06155 58 AAAHAL-AAAGVKRGDRVALMCG-NRIEFLDVFLGCAWLGAIAVPINTALRGPQLEHILRNSGARLLVVEAALLAALEAA 135 (542)
T ss_pred HHHHHH-HHcCCCCCCEEEEECC-CChHHHHHHHHHHHhCCEEEEeccccCHHHHHHHHHhcCceEEEEChhhHHHHHHh
Confidence 359999 7899999999999999 9999999999999999999999999999999999999999999998765543321
Q ss_pred -----C-CcEEEecCch-------hhhhhccCcccccccCCCCCCCCCCeEEEEccCCCCCCccceecchHHHHHHHHHh
Q 011116 97 -----N-LRTILMDSPE-------FISLLNQNEDVADFANSNMTVYQSDPAAILYSSGTTGKVKGVLLSHLNVIAIIAGY 163 (493)
Q Consensus 97 -----~-~~~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~TSGTTG~pK~v~~t~~~~~~~~~~~ 163 (493)
. ..++.++... |........ ..........++++++++|||||||.||+|.++|.++.......
T Consensus 136 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~a~il~TSGTTG~PK~V~~t~~~~~~~~~~~ 212 (542)
T PRK06155 136 DPGDLPLPAVWLLDAPASVSVPAGWSTAPLPPL---DAPAPAAAVQPGDTAAILYTSGTTGPSKGVCCPHAQFYWWGRNS 212 (542)
T ss_pred cccccCcceEEEecCccccccccccchhhhccc---CCCCCCCCCCCCCeEEEEECCCCCCCCcEEEEEHHHHHHHHHHH
Confidence 1 1233333211 110000000 00111223467899999999999999999999999998777666
Q ss_pred hhhcccCCCCCCCCCCcEEEEecChhHHHHHHHHHHHHhcCCeEEEecCCCHHHHHHHHHhcCeeecccChHHHHHHHhc
Q 011116 164 YHVTEETDPNEGPPPHPVSFFTLPMFHVFGFFMLVRAASKGETLVFMERFDFEKMLKAVENYRVTYMPVSPPLIVAFINS 243 (493)
Q Consensus 164 ~~~~~~~~~~~~~~~~~~~~~~~pl~~~~g~~~~~~~l~~G~~~~~~~~~~~~~~~~~l~~~~~t~l~~~P~~~~~l~~~ 243 (493)
...+ ++.+++++++.+|++|..++..++.++..|+++++.+.+++..+++.++++++|++.++|+++..|.+.
T Consensus 213 ~~~~-------~~~~~~~~l~~~pl~~~~~~~~~~~~l~~G~~~~~~~~~~~~~~~~~l~~~~~t~~~~~p~~~~~l~~~ 285 (542)
T PRK06155 213 AEDL-------EIGADDVLYTTLPLFHTNALNAFFQALLAGATYVLEPRFSASGFWPAVRRHGATVTYLLGAMVSILLSQ 285 (542)
T ss_pred HHhc-------CCCCCCEEEEecCHHHHHHHHHHHHHHHcCceEEeeCCCCHHHHHHHHHHhCCcEEEchHHHHHHHHcC
Confidence 5555 347889999999999999998889999999999999888999999999999999999999999999887
Q ss_pred ccCCCCCCCCeeEEEecCCCCCHHHHHHHHHhCCCCceeccccccccCCccccccCCCCCCCCCccccccCCceEEEEcC
Q 011116 244 KLTDKYDLSSLQLLGCGGAPLGKEVTLKFKEKFPNVEIRQGYGLTETGGAGSRVIGPDEAERHGSVGRLAELMEAKIVDP 323 (493)
Q Consensus 244 ~~~~~~~l~~lr~v~~~Ge~~~~~~~~~~~~~~~~~~v~~~yG~tE~g~~~~~~~~~~~~~~~~~~g~p~~~~~~~i~d~ 323 (493)
........+++|.++.+| +++++.+.+.+.+ ++++++.||+||++..+.... .....+++|.|.++++++|+|
T Consensus 286 ~~~~~~~~~~l~~~~~g~--~~~~~~~~~~~~~-~~~v~~~YG~tE~~~~~~~~~---~~~~~~~vG~~~~~~~~~i~d- 358 (542)
T PRK06155 286 PARESDRAHRVRVALGPG--VPAALHAAFRERF-GVDLLDGYGSTETNFVIAVTH---GSQRPGSMGRLAPGFEARVVD- 358 (542)
T ss_pred cCccccccCceEEEEEcC--CCHHHHHHHHHHc-CCCEEeeecccccCccccCCC---CCCCCCCcCccCCCceEEEEC-
Confidence 665555667888877555 6789999999998 899999999999987655421 234567899999999999999
Q ss_pred CCCccCCCCCceEEEEeCc---cccccccCCcccccccccCCCeeeccceEEEcCCCcEEEEcccCCeEEeCceeeChHH
Q 011116 324 ATGEALPPGQKGELWLRGP---TIMKGYVGDDKATSETVHSEGWLKTGDLCYFDSNGFLFIVDRLKELIKYKAYQVPPVE 400 (493)
Q Consensus 324 ~~~~~~~~g~~Gel~v~~~---~~~~gy~~~~~~~~~~~~~~~~~~TgD~~~~~~~g~~~~~GR~~d~i~~~G~~i~~~~ 400 (493)
+++++++.|+.|||+++|+ .++.||+++++.+...| .++||+|||++++++||.+++.||.+|+|+.+|.+++|.+
T Consensus 359 ~~~~~~~~g~~Gei~v~~~~~~~~~~GY~~~~~~~~~~~-~~~~~~TGD~~~~~~dG~l~i~GR~~d~i~~~G~~v~p~e 437 (542)
T PRK06155 359 EHDQELPDGEPGELLLRADEPFAFATGYFGMPEKTVEAW-RNLWFHTGDRVVRDADGWFRFVDRIKDAIRRRGENISSFE 437 (542)
T ss_pred CCCCCCCCCCceEEEEecCCccccchhhcCCHHHHHHhh-cCCcEeccceEEEcCCceEEEEecCCCEEEeCCEEECHHH
Confidence 6689999999999999998 69999999998888777 4899999999999999999999999999999999999999
Q ss_pred HHHHHhcCCCcceEEEEeeeCCCCCeeEEEEEEeCCCCCCCHHHHHHHHHhcCCCCCCcceEEEeccccCCCCCccchHH
Q 011116 401 LEHLLHSNPEIADAAVIPYPDEEAGQIPMAFVVRKPGSNITEAEIMDFIAKQVAPYKKIRRVAFINSIPKSTAGKILRRE 480 (493)
Q Consensus 401 ie~~l~~~~~v~~~~v~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~l~~~l~~~~~p~~~~~~~~lP~t~~GK~~r~~ 480 (493)
||++|.++|+|.+++|++++++..++.+.+++++.++...+..+++++++++++.+++|..|.+++++|+|++||++|+.
T Consensus 438 IE~~l~~~~~V~~~~v~~v~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~l~~~~~P~~i~~~~~iP~t~~GKi~r~~ 517 (542)
T PRK06155 438 VEQVLLSHPAVAAAAVFPVPSELGEDEVMAAVVLRDGTALEPVALVRHCEPRLAYFAVPRYVEFVAALPKTENGKVQKFV 517 (542)
T ss_pred HHHHHHhCCCeeEEEEEeecccccCceEEEEEEECCCCCCCHHHHHHHHHhhCcCccCCcEEEEeccCCCCcccceeHHH
Confidence 99999999999999999999887778888888888777788899999999999999999999999999999999999999
Q ss_pred HHHHHhhCC
Q 011116 481 LVTHAISGN 489 (493)
Q Consensus 481 l~~~~~~~~ 489 (493)
|++++...+
T Consensus 518 l~~~~~~~~ 526 (542)
T PRK06155 518 LREQGVTAD 526 (542)
T ss_pred HHhhccCCc
Confidence 999886544
No 39
>PRK05852 acyl-CoA synthetase; Validated
Probab=100.00 E-value=1.3e-62 Score=504.87 Aligned_cols=458 Identities=22% Similarity=0.361 Sum_probs=377.4
Q ss_pred hhHHHHHHhhCCCCCCCEEEEECCCCCCcHHHHHHHHHHcCCeeccCCCCCCHHHHHHHHhhcCCeEEEEcCCCcccCCC
Q 011116 17 FTLSHALSKRDSLCRKTTSLTSSPLPPSTSPVLYFSLLSLGVVISPANPLSSTSEVSHQIQLSKPSIAFATSHTSYKLPS 96 (493)
Q Consensus 17 ~~lA~~L~~~~gl~~gd~V~l~~~~~~~~~~~~~lA~~~~G~~~v~i~~~~~~~~l~~~l~~~~~~~il~~~~~~~~~~~ 96 (493)
.++|++| .+.|+++||+|+++++ |+++++++++||+++|++++|+++.++.+++.++++.+++++++++.........
T Consensus 54 ~~~a~~L-~~~gv~~gd~V~i~~~-n~~~~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~~ 131 (534)
T PRK05852 54 DDLAGQL-TRSGLLPGDRVALRMG-SNAEFVVALLAASRADLVVVPLDPALPIAEQRVRSQAAGARVVLIDADGPHDRAE 131 (534)
T ss_pred HHHHHHH-HhcCCCCCCEEEEECC-CcHHHHHHHHHHHHcCcEEeecCCCCCcHHHHHHHHhCCCCEEEEcCCCcchhcc
Confidence 3459999 7889999999999999 9999999999999999999999999999999999999999999997643321111
Q ss_pred ----CCc-EEEecCch-----hhhhhccCcccccccCCCCCCCCCCeEEEEccCCCCCCccceecchHHHHHHHHHhhhh
Q 011116 97 ----NLR-TILMDSPE-----FISLLNQNEDVADFANSNMTVYQSDPAAILYSSGTTGKVKGVLLSHLNVIAIIAGYYHV 166 (493)
Q Consensus 97 ----~~~-~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~TSGTTG~pK~v~~t~~~~~~~~~~~~~~ 166 (493)
... .+.+.... .......................+++++++|||||||.||+|.++|.++...+......
T Consensus 132 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~il~TSGTTG~PKgv~~~~~~~~~~~~~~~~~ 211 (534)
T PRK05852 132 PTTRWWPLTVNVGGDSGPSGGTLSVHLDAATEPTPATSTPEGLRPDDAMIMFTGGTTGLPKMVPWTHANIASSVRAIITG 211 (534)
T ss_pred ccccccceeeeecccccccccccccccccccCCCccccccCCCCCCceEEEeCCCCCCCCcEEEecHHHHHHHHHHHHHH
Confidence 001 11111100 00000000000000011112234678999999999999999999999999888877666
Q ss_pred cccCCCCCCCCCCcEEEEecChhHHHHH-HHHHHHHhcCCeEEEec--CCCHHHHHHHHHhcCeeecccChHHHHHHHhc
Q 011116 167 TEETDPNEGPPPHPVSFFTLPMFHVFGF-FMLVRAASKGETLVFME--RFDFEKMLKAVENYRVTYMPVSPPLIVAFINS 243 (493)
Q Consensus 167 ~~~~~~~~~~~~~~~~~~~~pl~~~~g~-~~~~~~l~~G~~~~~~~--~~~~~~~~~~l~~~~~t~l~~~P~~~~~l~~~ 243 (493)
+. +.++|++++..|++|..++ ..++.++..|+++++.. .+++..+++.++++++|+++++|+++..+.+.
T Consensus 212 ~~-------~~~~d~~~~~~p~~~~~g~~~~~~~~l~~g~~~~~~~~~~~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~ 284 (534)
T PRK05852 212 YR-------LSPRDATVAVMPLYHGHGLIAALLATLASGGAVLLPARGRFSAHTFWDDIKAVGATWYTAVPTIHQILLER 284 (534)
T ss_pred hC-------CCCcceEEEecCcchhHHHHHHHHHHHhcCCeEEeCCCcCcCHHHHHHHHHHcCCcEEEcChHHHHHHHhh
Confidence 63 4789999999999999998 46888889999988764 46889999999999999999999999999886
Q ss_pred ccCC--CCCCCCeeEEEecCCCCCHHHHHHHHHhCCCCceeccccccccCCccccccCC------CCCCCCCccccccCC
Q 011116 244 KLTD--KYDLSSLQLLGCGGAPLGKEVTLKFKEKFPNVEIRQGYGLTETGGAGSRVIGP------DEAERHGSVGRLAEL 315 (493)
Q Consensus 244 ~~~~--~~~l~~lr~v~~~Ge~~~~~~~~~~~~~~~~~~v~~~yG~tE~g~~~~~~~~~------~~~~~~~~~g~p~~~ 315 (493)
.... ....+++|.+.++|+++++++.+++.+.| ++++++.||+||++..++..... ......+..|. .++
T Consensus 285 ~~~~~~~~~~~~lr~i~~~G~~~~~~~~~~~~~~~-~~~v~~~YG~tE~~~~~~~~~~~~~~~~~~~~~~~g~~g~-~~g 362 (534)
T PRK05852 285 AATEPSGRKPAALRFIRSCSAPLTAETAQALQTEF-AAPVVCAFGMTEATHQVTTTQIEGIGQTENPVVSTGLVGR-STG 362 (534)
T ss_pred cccccccccCCCeeEEEECCCCCCHHHHHHHHHHh-CCChhhccCccccchhhhcCCccccccccCcccccccCCC-CCC
Confidence 5432 33467899999999999999999999999 89999999999998755432110 01112233343 689
Q ss_pred ceEEEEcCCCCccCCCCCceEEEEeCccccccccCCcccccccccCCCeeeccceEEEcCCCcEEEEcccCCeEEeCcee
Q 011116 316 MEAKIVDPATGEALPPGQKGELWLRGPTIMKGYVGDDKATSETVHSEGWLKTGDLCYFDSNGFLFIVDRLKELIKYKAYQ 395 (493)
Q Consensus 316 ~~~~i~d~~~~~~~~~g~~Gel~v~~~~~~~gy~~~~~~~~~~~~~~~~~~TgD~~~~~~~g~~~~~GR~~d~i~~~G~~ 395 (493)
++++++| +++++++.|+.|||+++|+.+++||+++++.+.+.| .+|||+|||++++++||++++.||.+|+||.+|.+
T Consensus 363 ~~~~i~d-~~g~~~~~g~~Gel~v~g~~v~~gY~~~~~~t~~~~-~~g~~~TGD~~~~d~dG~l~~~gR~~d~i~~~G~~ 440 (534)
T PRK05852 363 AQIRIVG-SDGLPLPAGAVGEVWLRGTTVVRGYLGDPTITAANF-TDGWLRTGDLGSLSAAGDLSIRGRIKELINRGGEK 440 (534)
T ss_pred CeEEEEC-CCCCCCCCCCceEEEEecCcccchhcCCcccchhhh-cCCCcccCceEEEeCCCcEEEEecchhhEEECCEE
Confidence 9999999 568899999999999999999999999999998887 47999999999999999999999999999999999
Q ss_pred eChHHHHHHHhcCCCcceEEEEeeeCCCCCeeEEEEEEeCCCCCCCHHHHHHHHHhcCCCCCCcceEEEeccccCCCCCc
Q 011116 396 VPPVELEHLLHSNPEIADAAVIPYPDEEAGQIPMAFVVRKPGSNITEAEIMDFIAKQVAPYKKIRRVAFINSIPKSTAGK 475 (493)
Q Consensus 396 i~~~~ie~~l~~~~~v~~~~v~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~l~~~l~~~~~p~~~~~~~~lP~t~~GK 475 (493)
|++.+||++|.++|+|.+++|++..++..++.+.++++..+....+.+++.++++++++++++|..+.+++++|+|++||
T Consensus 441 v~~~~iE~~l~~~~~V~~~~v~g~~~~~~g~~~~~~vv~~~~~~~~~~~i~~~~~~~l~~~~~P~~i~~v~~iP~t~~GK 520 (534)
T PRK05852 441 ISPERVEGVLASHPNVMEAAVFGVPDQLYGEAVAAVIVPRESAPPTAEELVQFCRERLAAFEIPASFQEASGLPHTAKGS 520 (534)
T ss_pred ECHHHHHHHHHhCCCeeeEEEEecCCcCcCceEEEEEEECCCCCCCHHHHHHHHHHhcccccCCeEEEEhhhcCCCCCcc
Confidence 99999999999999999999999998888888999999877666788999999999999999999999999999999999
Q ss_pred cchHHHHHHHhh
Q 011116 476 ILRRELVTHAIS 487 (493)
Q Consensus 476 ~~r~~l~~~~~~ 487 (493)
++|+.|++++.+
T Consensus 521 i~r~~L~~~~~~ 532 (534)
T PRK05852 521 LDRRAVAEQFGH 532 (534)
T ss_pred ccHHHHHHHhcc
Confidence 999999998854
No 40
>PRK08315 AMP-binding domain protein; Validated
Probab=100.00 E-value=2.1e-62 Score=506.70 Aligned_cols=461 Identities=30% Similarity=0.466 Sum_probs=390.8
Q ss_pred hHHHHHHhhCCCCCCCEEEEECCCCCCcHHHHHHHHHHcCCeeccCCCCCCHHHHHHHHhhcCCeEEEEcCCCccc----
Q 011116 18 TLSHALSKRDSLCRKTTSLTSSPLPPSTSPVLYFSLLSLGVVISPANPLSSTSEVSHQIQLSKPSIAFATSHTSYK---- 93 (493)
Q Consensus 18 ~lA~~L~~~~gl~~gd~V~l~~~~~~~~~~~~~lA~~~~G~~~v~i~~~~~~~~l~~~l~~~~~~~il~~~~~~~~---- 93 (493)
++|++| .+.|+++||+|+++++ |+++++++++||+++|++++|+++..+.+++..+++.+++++++++++....
T Consensus 55 ~~a~~L-~~~gi~~g~~V~i~~~-~~~~~~~~~la~~~~G~~~v~l~~~~~~~~~~~~l~~~~~~~ii~~~~~~~~~~~~ 132 (559)
T PRK08315 55 ALAKGL-LALGIEKGDRVGIWAP-NVPEWVLTQFATAKIGAILVTINPAYRLSELEYALNQSGCKALIAADGFKDSDYVA 132 (559)
T ss_pred HHHHHH-HHcCCCCCCEEEEECC-CChHHHHHHHHHHHhCeEEEecCccCCHHHHHHHHHhcCCCEEEEeccccccchHH
Confidence 459999 7889999999999999 9999999999999999999999999999999999999999999998754221
Q ss_pred --------C-------------CCCCcEEEecC------chhhhhhccCccc--ccccCCCCCCCCCCeEEEEccCCCCC
Q 011116 94 --------L-------------PSNLRTILMDS------PEFISLLNQNEDV--ADFANSNMTVYQSDPAAILYSSGTTG 144 (493)
Q Consensus 94 --------~-------------~~~~~~~~~~~------~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~i~~TSGTTG 144 (493)
+ ......+.++. ..+..+....... ............+++++++|||||||
T Consensus 133 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~i~~TSGtTG 212 (559)
T PRK08315 133 MLYELAPELATCEPGQLQSARLPELRRVIFLGDEKHPGMLNFDELLALGRAVDDAELAARQATLDPDDPINIQYTSGTTG 212 (559)
T ss_pred HHHHhhhhhhcccccccccccCCCceeEEeecccCCcccccHHHHHhhccccccccccchhccCCCCCcEEEEEcCCCCC
Confidence 0 00001222221 1233332211000 00011122345788999999999999
Q ss_pred CccceecchHHHHHHHHHhhhhcccCCCCCCCCCCcEEEEecChhHHHHH-HHHHHHHhcCCeEEEe-cCCCHHHHHHHH
Q 011116 145 KVKGVLLSHLNVIAIIAGYYHVTEETDPNEGPPPHPVSFFTLPMFHVFGF-FMLVRAASKGETLVFM-ERFDFEKMLKAV 222 (493)
Q Consensus 145 ~pK~v~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pl~~~~g~-~~~~~~l~~G~~~~~~-~~~~~~~~~~~l 222 (493)
.||+|.++|.++..++......+ ++.++++++..+|++|..++ ..++.++..|+++++. ..+++..+++.+
T Consensus 213 ~PK~v~~s~~~l~~~~~~~~~~~-------~~~~~d~~~~~~p~~~~~g~~~~~~~~l~~g~~~~~~~~~~~~~~~~~~l 285 (559)
T PRK08315 213 FPKGATLTHRNILNNGYFIGEAM-------KLTEEDRLCIPVPLYHCFGMVLGNLACVTHGATMVYPGEGFDPLATLAAV 285 (559)
T ss_pred CcceEEeeHHHHHHHHHHHHHhc-------CCCCCceEEEecCcHHHHHHHHHHHHHHhccceEEEecCCCCHHHHHHHH
Confidence 99999999999988877776666 34889999999999999998 5688899999999854 567899999999
Q ss_pred HhcCeeecccChHHHHHHHhcccCCCCCCCCeeEEEecCCCCCHHHHHHHHHhCCCCceeccccccccCCccccccCCC-
Q 011116 223 ENYRVTYMPVSPPLIVAFINSKLTDKYDLSSLQLLGCGGAPLGKEVTLKFKEKFPNVEIRQGYGLTETGGAGSRVIGPD- 301 (493)
Q Consensus 223 ~~~~~t~l~~~P~~~~~l~~~~~~~~~~l~~lr~v~~~Ge~~~~~~~~~~~~~~~~~~v~~~yG~tE~g~~~~~~~~~~- 301 (493)
+++++|++.++|+++..++.........++++|.++++|+++++++.+.+.+.|+..++++.||+||++.+++......
T Consensus 286 ~~~~~t~~~~~P~~~~~~~~~~~~~~~~~~~lr~~~~~G~~~~~~~~~~~~~~~~~~~l~~~YG~tE~~~~~~~~~~~~~ 365 (559)
T PRK08315 286 EEERCTALYGVPTMFIAELDHPDFARFDLSSLRTGIMAGSPCPIEVMKRVIDKMHMSEVTIAYGMTETSPVSTQTRTDDP 365 (559)
T ss_pred HHcCCeEEecchHHHHHHHhCcccCCCCchhhheeEecCCCCCHHHHHHHHHHcCCcceeEEEcccccccceeecCcccc
Confidence 9999999999999999888876555667889999999999999999999999985566999999999987655432221
Q ss_pred CCCCCCccccccCCceEEEEcCCCCccCCCCCceEEEEeCccccccccCCcccccccccCCCeeeccceEEEcCCCcEEE
Q 011116 302 EAERHGSVGRLAELMEAKIVDPATGEALPPGQKGELWLRGPTIMKGYVGDDKATSETVHSEGWLKTGDLCYFDSNGFLFI 381 (493)
Q Consensus 302 ~~~~~~~~g~p~~~~~~~i~d~~~~~~~~~g~~Gel~v~~~~~~~gy~~~~~~~~~~~~~~~~~~TgD~~~~~~~g~~~~ 381 (493)
......++|+|+++++++++|++++++++.|+.|||+++|+.+..||++++..+...+..++||+|||+++++++|.+++
T Consensus 366 ~~~~~~~vG~p~~~~~v~i~d~~~~~~~~~g~~GEl~v~g~~~~~gy~~~~~~~~~~~~~~~~~~TGD~~~~~~dg~~~~ 445 (559)
T PRK08315 366 LEKRVTTVGRALPHLEVKIVDPETGETVPRGEQGELCTRGYSVMKGYWNDPEKTAEAIDADGWMHTGDLAVMDEEGYVNI 445 (559)
T ss_pred hhhccCCCCccCCCcEEEEEcCccCCcCCCCCceEEEEECchhhhhhcCChhHHhhcCCCCCCEEccceEEEcCCceEEE
Confidence 12346789999999999999987799999999999999999999999999999888887789999999999999999999
Q ss_pred EcccCCeEEeCceeeChHHHHHHHhcCCCcceEEEEeeeCCCCCeeEEEEEEeCCCCCCCHHHHHHHHHhcCCCCCCcce
Q 011116 382 VDRLKELIKYKAYQVPPVELEHLLHSNPEIADAAVIPYPDEEAGQIPMAFVVRKPGSNITEAEIMDFIAKQVAPYKKIRR 461 (493)
Q Consensus 382 ~GR~~d~i~~~G~~i~~~~ie~~l~~~~~v~~~~v~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~l~~~l~~~~~p~~ 461 (493)
.||.+|+++.+|.++++.+||++|.++++|.+++|++..++..++.++++|++.++...+.++++++++++++.+++|..
T Consensus 446 ~GR~d~~i~~~G~~v~~~eIE~~l~~~~~v~~~~v~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~l~~~l~~~~~P~~ 525 (559)
T PRK08315 446 VGRIKDMIIRGGENIYPREIEEFLYTHPKIQDVQVVGVPDEKYGEEVCAWIILRPGATLTEEDVRDFCRGKIAHYKIPRY 525 (559)
T ss_pred EeeccceEEECCEEEcHHHHHHHHHhCCCceEEEEEecCCCCCCeEEEEEEEeCCCCCCCHHHHHHHHHhhcccccCCcE
Confidence 99999999999999999999999999999999999999888778888899988777667888999999999999999999
Q ss_pred EEEeccccCCCCCccchHHHHHHHhh
Q 011116 462 VAFINSIPKSTAGKILRRELVTHAIS 487 (493)
Q Consensus 462 ~~~~~~lP~t~~GK~~r~~l~~~~~~ 487 (493)
+.+++++|+|++||++|.+|++++..
T Consensus 526 i~~v~~lP~t~~GK~~r~~L~~~~~~ 551 (559)
T PRK08315 526 IRFVDEFPMTVTGKIQKFKMREMMIE 551 (559)
T ss_pred EEEcccCCCCCCCceeHHHHHHHHHh
Confidence 99999999999999999999998765
No 41
>PRK06187 long-chain-fatty-acid--CoA ligase; Validated
Probab=100.00 E-value=1.1e-62 Score=504.99 Aligned_cols=456 Identities=33% Similarity=0.515 Sum_probs=397.1
Q ss_pred hHHHHHHhhCCCCCCCEEEEECCCCCCcHHHHHHHHHHcCCeeccCCCCCCHHHHHHHHhhcCCeEEEEcCCCcccCCC-
Q 011116 18 TLSHALSKRDSLCRKTTSLTSSPLPPSTSPVLYFSLLSLGVVISPANPLSSTSEVSHQIQLSKPSIAFATSHTSYKLPS- 96 (493)
Q Consensus 18 ~lA~~L~~~~gl~~gd~V~l~~~~~~~~~~~~~lA~~~~G~~~v~i~~~~~~~~l~~~l~~~~~~~il~~~~~~~~~~~- 96 (493)
++|++| .+.|+++|++|+++++ |+++++++++||+++|++++|+++.++.+++..+++.+++++++++.+....+.+
T Consensus 43 ~~a~~L-~~~g~~~~~~V~l~~~-~~~~~~~~~la~~~~G~~~v~~~~~~~~~~~~~~i~~~~~~~i~~~~~~~~~~~~~ 120 (521)
T PRK06187 43 RLANAL-RALGVKKGDRVAVFDW-NSHEYLEAYFAVPKIGAVLHPINIRLKPEEIAYILNDAEDRVVLVDSEFVPLLAAI 120 (521)
T ss_pred HHHHHH-HHcCCCCCCEEEEECC-CCHHHHHHHHHHHHcCeEEEecccCCCHHHHHHHHHhcCCeEEEEcchHHHHHHHH
Confidence 359999 6789999999999999 9999999999999999999999999999999999999999999999876554322
Q ss_pred -----CC-cEEEecCc----------hhhhhhccCcccccccCCCCCCCCCCeEEEEccCCCCCCccceecchHHHHHHH
Q 011116 97 -----NL-RTILMDSP----------EFISLLNQNEDVADFANSNMTVYQSDPAAILYSSGTTGKVKGVLLSHLNVIAII 160 (493)
Q Consensus 97 -----~~-~~~~~~~~----------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~TSGTTG~pK~v~~t~~~~~~~~ 160 (493)
.. .++.++.. ++.+++.... ..........+++++++|||||||.||++.++|.++....
T Consensus 121 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~i~~TSGtTG~PK~v~~t~~~l~~~~ 196 (521)
T PRK06187 121 LPQLPTVRTVIVEGDGPAAPLAPEVGEYEELLAAAS----DTFDFPDIDENDAAAMLYTSGTTGHPKGVVLSHRNLFLHS 196 (521)
T ss_pred hhccCCccEEEEecCccccccccccccHHHHhhcCC----ccCCCCCCCccceEEEEECCCCCCCCceEEeehHHHHHHH
Confidence 11 23333221 2333333221 1122334567889999999999999999999999999888
Q ss_pred HHhhhhcccCCCCCCCCCCcEEEEecChhHHHHHHHHHHHHhcCCeEEEecCCCHHHHHHHHHhcCeeecccChHHHHHH
Q 011116 161 AGYYHVTEETDPNEGPPPHPVSFFTLPMFHVFGFFMLVRAASKGETLVFMERFDFEKMLKAVENYRVTYMPVSPPLIVAF 240 (493)
Q Consensus 161 ~~~~~~~~~~~~~~~~~~~~~~~~~~pl~~~~g~~~~~~~l~~G~~~~~~~~~~~~~~~~~l~~~~~t~l~~~P~~~~~l 240 (493)
......+ ++.+++++++.+|++|..++...+.++..|+++++.+..++..+++.++++++|+++++|++++.+
T Consensus 197 ~~~~~~~-------~~~~~d~~~~~~~~~~~~~~~~~~~~l~~G~~~v~~~~~~~~~~~~~l~~~~~t~l~~~p~~~~~l 269 (521)
T PRK06187 197 LAVCAWL-------KLSRDDVYLVIVPMFHVHAWGLPYLALMAGAKQVIPRRFDPENLLDLIETERVTFFFAVPTIWQML 269 (521)
T ss_pred HHHHHhh-------CCCCCCEEEEeCCchHHhhHHHHHHHHHhCCEEEecCCCCHHHHHHHHHHhCCeEEEchHHHHHHH
Confidence 7776655 458999999999999999987666699999999999888999999999999999999999999999
Q ss_pred HhcccCCCCCCCCeeEEEecCCCCCHHHHHHHHHhCCCCceeccccccccCCccccccCCCC----CCCCCccccccCCc
Q 011116 241 INSKLTDKYDLSSLQLLGCGGAPLGKEVTLKFKEKFPNVEIRQGYGLTETGGAGSRVIGPDE----AERHGSVGRLAELM 316 (493)
Q Consensus 241 ~~~~~~~~~~l~~lr~v~~~Ge~~~~~~~~~~~~~~~~~~v~~~yG~tE~g~~~~~~~~~~~----~~~~~~~g~p~~~~ 316 (493)
.+........++++|.+++|||++++++.+++.+.| ++++++.||+||+|+++........ .....++|+|.+++
T Consensus 270 ~~~~~~~~~~~~~l~~v~~~Ge~l~~~~~~~~~~~~-~~~v~~~YG~tE~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~ 348 (521)
T PRK06187 270 LKAPRAYFVDFSSLRLVIYGGAALPPALLREFKEKF-GIDLVQGYGMTETSPVVSVLPPEDQLPGQWTKRRSAGRPLPGV 348 (521)
T ss_pred HcCcCCCccCcchhhEEEEcCcCCCHHHHHHHHHHh-CcchheeeccCccCcccccCCcccccccccccCCccccccCCe
Confidence 988776667788999999999999999999999999 8999999999999876665322221 12567899999999
Q ss_pred eEEEEcCCCCccCCC--CCceEEEEeCccccccccCCcccccccccCCCeeeccceEEEcCCCcEEEEcccCCeEEeCce
Q 011116 317 EAKIVDPATGEALPP--GQKGELWLRGPTIMKGYVGDDKATSETVHSEGWLKTGDLCYFDSNGFLFIVDRLKELIKYKAY 394 (493)
Q Consensus 317 ~~~i~d~~~~~~~~~--g~~Gel~v~~~~~~~gy~~~~~~~~~~~~~~~~~~TgD~~~~~~~g~~~~~GR~~d~i~~~G~ 394 (493)
.++|+| +++.+++. |+.|||+++|+.+..||+++++.+.+.+. ++||+|||+++++++|.+++.||.+|++|++|.
T Consensus 349 ~~~i~~-~~~~~~~~~~g~~Gel~v~~~~~~~~y~~~~~~~~~~~~-~~~~~tGD~~~~~~~g~~~~~GR~~~~i~~~G~ 426 (521)
T PRK06187 349 EARIVD-DDGDELPPDGGEVGEIIVRGPWLMQGYWNRPEATAETID-GGWLHTGDVGYIDEDGYLYITDRIKDVIISGGE 426 (521)
T ss_pred EEEEEC-CCCCCCCCCCCCeeEEEEECcchhhhhcCCHHHHHHHhh-CCceeccceEEEcCCCCEEEeecccceEEcCCe
Confidence 999999 55778888 99999999999999999999988888874 679999999999999999999999999999999
Q ss_pred eeChHHHHHHHhcCCCcceEEEEeeeCCCCCeeEEEEEEeCCCCCCCHHHHHHHHHhcCCCCCCcceEEEeccccCCCCC
Q 011116 395 QVPPVELEHLLHSNPEIADAAVIPYPDEEAGQIPMAFVVRKPGSNITEAEIMDFIAKQVAPYKKIRRVAFINSIPKSTAG 474 (493)
Q Consensus 395 ~i~~~~ie~~l~~~~~v~~~~v~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~l~~~l~~~~~p~~~~~~~~lP~t~~G 474 (493)
++++.+||+.+.++++|.++++++.+++..++.+++++++.++...+.++++++++++++.+.+|..+++++++|+|++|
T Consensus 427 ~v~~~~IE~~l~~~~~v~~~~v~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~l~~~l~~~~~p~~i~~v~~~P~t~~g 506 (521)
T PRK06187 427 NIYPRELEDALYGHPAVAEVAVIGVPDEKWGERPVAVVVLKPGATLDAKELRAFLRGRLAKFKLPKRIAFVDELPRTSVG 506 (521)
T ss_pred EECHHHHHHHHHhCCCceEEEEEeccCCCcCceEEEEEEECCCCCCCHHHHHHHHHHhccCCCCceEEEEccCCCCCCCC
Confidence 99999999999999999999999998887888999999998877788899999999999999999999999999999999
Q ss_pred ccchHHHHHHHhhCC
Q 011116 475 KILRRELVTHAISGN 489 (493)
Q Consensus 475 K~~r~~l~~~~~~~~ 489 (493)
|++|+.|++++.+.+
T Consensus 507 K~~r~~l~~~~~~~~ 521 (521)
T PRK06187 507 KILKRVLREQYAEGK 521 (521)
T ss_pred CeeHHHHHHHHhcCC
Confidence 999999999998754
No 42
>PRK09088 acyl-CoA synthetase; Validated
Probab=100.00 E-value=3.4e-62 Score=496.78 Aligned_cols=449 Identities=24% Similarity=0.399 Sum_probs=379.2
Q ss_pred hHHHHHHhhCCCCCCCEEEEECCCCCCcHHHHHHHHHHcCCeeccCCCCCCHHHHHHHHhhcCCeEEEEcCCCcccCCCC
Q 011116 18 TLSHALSKRDSLCRKTTSLTSSPLPPSTSPVLYFSLLSLGVVISPANPLSSTSEVSHQIQLSKPSIAFATSHTSYKLPSN 97 (493)
Q Consensus 18 ~lA~~L~~~~gl~~gd~V~l~~~~~~~~~~~~~lA~~~~G~~~v~i~~~~~~~~l~~~l~~~~~~~il~~~~~~~~~~~~ 97 (493)
++|++| .+.|+++||+|+++++ |+++++++++||+++|++++|+++.++.+++..++++++++++++++......
T Consensus 34 ~~a~~l-~~~g~~~~~~v~i~~~-~~~~~~~~~la~~~~G~~~v~~~~~~~~~~~~~~~~~~~~~~ii~~~~~~~~~--- 108 (488)
T PRK09088 34 RLAAVL-RRRGCVDGERLAVLAR-NSVWLVALHFACARVGAIYVPLNWRLSASELDALLQDAEPRLLLGDDAVAAGR--- 108 (488)
T ss_pred HHHHHH-HHcCCCCCCEEEEECC-CCHHHHHHHHHHHHcCeEEEeeCccCCHHHHHHHHHhCCCCEEEEcchhhccc---
Confidence 459999 7889999999999999 99999999999999999999999999999999999999999999986543211
Q ss_pred CcEEEecCchhhhhhccCcccccccCCCCCCCCCCeEEEEccCCCCCCccceecchHHHHHHHHHhhhhcccCCCCCCCC
Q 011116 98 LRTILMDSPEFISLLNQNEDVADFANSNMTVYQSDPAAILYSSGTTGKVKGVLLSHLNVIAIIAGYYHVTEETDPNEGPP 177 (493)
Q Consensus 98 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~TSGTTG~pK~v~~t~~~~~~~~~~~~~~~~~~~~~~~~~ 177 (493)
...+.+ ..+....... . .........+++++++|||||||.||++.++|+++............ ..
T Consensus 109 ~~~~~~--~~~~~~~~~~----~-~~~~~~~~~~~~~~i~~TSGTTG~PK~v~~s~~~l~~~~~~~~~~~~-------~~ 174 (488)
T PRK09088 109 TDVEDL--AAFIASADAL----E-PADTPSIPPERVSLILFTSGTSGQPKGVMLSERNLQQTAHNFGVLGR-------VD 174 (488)
T ss_pred ccccch--hhhhhhcccc----c-cccCCCCCCCCceEEEeCCCCCCCCcEEEEehHHHHHHHHHHHHhhC-------CC
Confidence 111111 1111111111 0 11122345688999999999999999999999999877666555442 37
Q ss_pred CCcEEEEecChhHHHHHH-HHHHHHhcCCeEEEecCCCHHHHHHHHH--hcCeeecccChHHHHHHHhcccCCCCCCCCe
Q 011116 178 PHPVSFFTLPMFHVFGFF-MLVRAASKGETLVFMERFDFEKMLKAVE--NYRVTYMPVSPPLIVAFINSKLTDKYDLSSL 254 (493)
Q Consensus 178 ~~~~~~~~~pl~~~~g~~-~~~~~l~~G~~~~~~~~~~~~~~~~~l~--~~~~t~l~~~P~~~~~l~~~~~~~~~~l~~l 254 (493)
.++++++.+|++|..++. .+..++..|+++++.+.+++..++..+. ++++|+++++|.++..+.+........++++
T Consensus 175 ~~d~~l~~~pl~~~~g~~~~~~~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~t~~~~~P~~~~~l~~~~~~~~~~~~~l 254 (488)
T PRK09088 175 AHSSFLCDAPMFHIIGLITSVRPVLAVGGSILVSNGFEPKRTLGRLGDPALGITHYFCVPQMAQAFRAQPGFDAAALRHL 254 (488)
T ss_pred CCcEEEEecchHHHHHHHHHHHHHHhcCCEEEEcCCCCHHHHHHHHHhhccCCcEEeeHHHHHHHHHhCcCcCccccccc
Confidence 889999999999999984 5777888999999888888899988886 4899999999999999887654445567899
Q ss_pred eEEEecCCCCCHHHHHHHHHhCCCCceeccccccccCCccccccCC-CCCCCCCccccccCCceEEEEcCCCCccCCCCC
Q 011116 255 QLLGCGGAPLGKEVTLKFKEKFPNVEIRQGYGLTETGGAGSRVIGP-DEAERHGSVGRLAELMEAKIVDPATGEALPPGQ 333 (493)
Q Consensus 255 r~v~~~Ge~~~~~~~~~~~~~~~~~~v~~~yG~tE~g~~~~~~~~~-~~~~~~~~~g~p~~~~~~~i~d~~~~~~~~~g~ 333 (493)
|.+++||++++.+..+.+.+. ++++++.||+||++......... ......+++|.|.++++++|+| ++++.++.|+
T Consensus 255 ~~~~~gG~~~~~~~~~~~~~~--g~~v~~~YG~TE~~~~~~~~~~~~~~~~~~~~vG~~~~~~~~~i~d-~~~~~~~~g~ 331 (488)
T PRK09088 255 TALFTGGAPHAAEDILGWLDD--GIPMVDGFGMSEAGTVFGMSVDCDVIRAKAGAAGIPTPTVQTRVVD-DQGNDCPAGV 331 (488)
T ss_pred eEEEecCCCCCHHHHHHHHHh--CCceeeeecccccccccccCCCcccccccCCccccCCCCcEEEEEC-CCCCCCcCCC
Confidence 999999999999888888765 78999999999998654321111 1123457899999999999999 6688899999
Q ss_pred ceEEEEeCccccccccCCcccccccccCCCeeeccceEEEcCCCcEEEEcccCCeEEeCceeeChHHHHHHHhcCCCcce
Q 011116 334 KGELWLRGPTIMKGYVGDDKATSETVHSEGWLKTGDLCYFDSNGFLFIVDRLKELIKYKAYQVPPVELEHLLHSNPEIAD 413 (493)
Q Consensus 334 ~Gel~v~~~~~~~gy~~~~~~~~~~~~~~~~~~TgD~~~~~~~g~~~~~GR~~d~i~~~G~~i~~~~ie~~l~~~~~v~~ 413 (493)
.|||+++|+.++.||+++++.+.+.++.+|||+|||+++++++|.+++.||.+|+|+.+|.+|+|.+||++|.++|.|.+
T Consensus 332 ~Gel~v~~~~~~~gY~~~~~~~~~~~~~~g~~~TGDl~~~~~~g~l~i~GR~~d~i~~~G~~i~~~~iE~~l~~~~~v~~ 411 (488)
T PRK09088 332 PGELLLRGPNLSPGYWRRPQATARAFTGDGWFRTGDIARRDADGFFWVVDRKKDMFISGGENVYPAEIEAVLADHPGIRE 411 (488)
T ss_pred ceEEEEECCccchhhcCChhhhhhhhcCCCCeeecceEEEcCCCcEEEeccccceEEeCCEEECHHHHHHHHHhCCCcce
Confidence 99999999999999999999998888788999999999999999999999999999999999999999999999999999
Q ss_pred EEEEeeeCCCCCeeEEEEEEeCCCCCCCHHHHHHHHHhcCCCCCCcceEEEeccccCCCCCccchHHHHHHHhhC
Q 011116 414 AAVIPYPDEEAGQIPMAFVVRKPGSNITEAEIMDFIAKQVAPYKKIRRVAFINSIPKSTAGKILRRELVTHAISG 488 (493)
Q Consensus 414 ~~v~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~l~~~l~~~~~p~~~~~~~~lP~t~~GK~~r~~l~~~~~~~ 488 (493)
+++++..++..++..++++++.++...+.+++.++++++++++++|..+.++++||+|++||++|+.|++++.+.
T Consensus 412 ~~v~~~~~~~~g~~~~~~v~~~~~~~~~~~~l~~~~~~~l~~~~~p~~i~~~~~iP~t~~gKi~r~~l~~~~~~~ 486 (488)
T PRK09088 412 CAVVGMADAQWGEVGYLAIVPADGAPLDLERIRSHLSTRLAKYKVPKHLRLVDALPRTASGKLQKARLRDALAAG 486 (488)
T ss_pred EEEEeCCCccCCceeEEEEEECCCCCCCHHHHHHHHHhhCcCCCCCCEEEEcccCCCCCCCceeHHHHHHHHHhc
Confidence 999999887778888899988776666788999999999999999999999999999999999999999988764
No 43
>PRK08316 acyl-CoA synthetase; Validated
Probab=100.00 E-value=1.5e-62 Score=504.26 Aligned_cols=456 Identities=27% Similarity=0.417 Sum_probs=393.4
Q ss_pred hHHHHHHhhCCCCCCCEEEEECCCCCCcHHHHHHHHHHcCCeeccCCCCCCHHHHHHHHhhcCCeEEEEcCCCcccCCCC
Q 011116 18 TLSHALSKRDSLCRKTTSLTSSPLPPSTSPVLYFSLLSLGVVISPANPLSSTSEVSHQIQLSKPSIAFATSHTSYKLPSN 97 (493)
Q Consensus 18 ~lA~~L~~~~gl~~gd~V~l~~~~~~~~~~~~~lA~~~~G~~~v~i~~~~~~~~l~~~l~~~~~~~il~~~~~~~~~~~~ 97 (493)
++|..| .+.|+++||+|+++++ |+++++++++||+++|++++|+++.++.+++..+++.+++++++++.+....+.+.
T Consensus 48 ~~a~~L-~~~gi~~~~~V~l~~~-~~~~~~~~~~a~~~~G~~~v~l~~~~~~~~i~~~l~~~~~~~ii~~~~~~~~~~~~ 125 (523)
T PRK08316 48 RVAAAL-LDLGLKKGDRVAALGH-NSDAYALLWLACARAGAVHVPVNFMLTGEELAYILDHSGARAFLVDPALAPTAEAA 125 (523)
T ss_pred HHHHHH-HHcCCCCCCEEEEECC-CCHHHHHHHHHHHhcCcEEEecccccCHHHHHHHHHhCCCCEEEEccchHHHHHHH
Confidence 359999 6679999999999999 99999999999999999999999999999999999999999999998765443210
Q ss_pred -----CcEEEec-----------CchhhhhhccCcccccccCCCCCCCCCCeEEEEccCCCCCCccceecchHHHHHHHH
Q 011116 98 -----LRTILMD-----------SPEFISLLNQNEDVADFANSNMTVYQSDPAAILYSSGTTGKVKGVLLSHLNVIAIIA 161 (493)
Q Consensus 98 -----~~~~~~~-----------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~TSGTTG~pK~v~~t~~~~~~~~~ 161 (493)
....... ...+....... ...........+++++++|||||||.||+|.++|.++.....
T Consensus 126 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~a~i~~TSGtTG~PK~v~~s~~~l~~~~~ 201 (523)
T PRK08316 126 LALLPVDTLILSLVLGGREAPGGWLDFADWAEAG----SVAEPDVELADDDLAQILYTSGTESLPKGAMLTHRALIAEYV 201 (523)
T ss_pred hhhcCccceeeeecccccccccchhhHHHHHhcC----CCccCccCCCCCCeEEEEeCCCCCCCCcEEEEecHHHHHHHH
Confidence 0000000 01122222111 111123345678999999999999999999999999988877
Q ss_pred HhhhhcccCCCCCCCCCCcEEEEecChhHHHHH-HHHHHHHhcCCeEEEecCCCHHHHHHHHHhcCeeecccChHHHHHH
Q 011116 162 GYYHVTEETDPNEGPPPHPVSFFTLPMFHVFGF-FMLVRAASKGETLVFMERFDFEKMLKAVENYRVTYMPVSPPLIVAF 240 (493)
Q Consensus 162 ~~~~~~~~~~~~~~~~~~~~~~~~~pl~~~~g~-~~~~~~l~~G~~~~~~~~~~~~~~~~~l~~~~~t~l~~~P~~~~~l 240 (493)
.....+. +.+++++++.+|++|..++ ..++.++..|+++++.+..+++.+++.++++++|++.++|+++..+
T Consensus 202 ~~~~~~~-------~~~~~~~~~~~p~~h~~g~~~~~~~~~~~G~~~~~~~~~~~~~~~~~i~~~~~t~~~~~P~~~~~l 274 (523)
T PRK08316 202 SCIVAGD-------MSADDIPLHALPLYHCAQLDVFLGPYLYVGATNVILDAPDPELILRTIEAERITSFFAPPTVWISL 274 (523)
T ss_pred HHHHHhC-------CCCCceEEEccCCchhhhHHHHHHHHHhcCceEEEecCCCHHHHHHHHHHhCCeEEEeCHHHHHHH
Confidence 7666653 4889999999999999998 4566678999999999888999999999999999999999999999
Q ss_pred HhcccCCCCCCCCeeEEEecCCCCCHHHHHHHHHhCCCCceeccccccccCCccccccCCCCCCCCCccccccCCceEEE
Q 011116 241 INSKLTDKYDLSSLQLLGCGGAPLGKEVTLKFKEKFPNVEIRQGYGLTETGGAGSRVIGPDEAERHGSVGRLAELMEAKI 320 (493)
Q Consensus 241 ~~~~~~~~~~l~~lr~v~~~Ge~~~~~~~~~~~~~~~~~~v~~~yG~tE~g~~~~~~~~~~~~~~~~~~g~p~~~~~~~i 320 (493)
++........++++|.+++||+.++.++.+.+++.|+++++++.||+||+|.++.............++|+|.++++++|
T Consensus 275 ~~~~~~~~~~~~~l~~~~~gg~~~~~~~~~~~~~~~~~~~~~~~YG~tE~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~i 354 (523)
T PRK08316 275 LRHPDFDTRDLSSLRKGYYGASIMPVEVLKELRERLPGLRFYNCYGQTEIAPLATVLGPEEHLRRPGSAGRPVLNVETRV 354 (523)
T ss_pred HcCcccccCCcccceEEEEcCCcCCHHHHHHHHHHcCCCceeeeecccccCccccccCccccccccCCcccCCCCcEEEE
Confidence 88776666678899999999999999999999999988999999999999887665433333345578999999999999
Q ss_pred EcCCCCccCCCCCceEEEEeCccccccccCCcccccccccCCCeeeccceEEEcCCCcEEEEcccCCeEEeCceeeChHH
Q 011116 321 VDPATGEALPPGQKGELWLRGPTIMKGYVGDDKATSETVHSEGWLKTGDLCYFDSNGFLFIVDRLKELIKYKAYQVPPVE 400 (493)
Q Consensus 321 ~d~~~~~~~~~g~~Gel~v~~~~~~~gy~~~~~~~~~~~~~~~~~~TgD~~~~~~~g~~~~~GR~~d~i~~~G~~i~~~~ 400 (493)
+| +++++++.|+.|||+++|+.+..||+++++.+.+.| .++||+|||+|++++||.+++.||.+|+|+++|++|+|.+
T Consensus 355 ~~-~~~~~~~~g~~Gei~v~~~~~~~~y~~~~~~~~~~~-~~~~~~TGDl~~~~~~g~l~i~gR~~~~i~~~G~~i~~~~ 432 (523)
T PRK08316 355 VD-DDGNDVAPGEVGEIVHRSPQLMLGYWDDPEKTAEAF-RGGWFHSGDLGVMDEEGYITVVDRKKDMIKTGGENVASRE 432 (523)
T ss_pred Ec-CCCCCCCCCCcceEEEECCchhhhhcCCHHHHHHHh-hCCCeeccceEEEcCCceEEEecccccEEEeCCeEECHHH
Confidence 99 668899999999999999999999999999888887 5899999999999999999999999999999999999999
Q ss_pred HHHHHhcCCCcceEEEEeeeCCCCCeeEEEEEEeCCCCCCCHHHHHHHHHhcCCCCCCcceEEEeccccCCCCCccchHH
Q 011116 401 LEHLLHSNPEIADAAVIPYPDEEAGQIPMAFVVRKPGSNITEAEIMDFIAKQVAPYKKIRRVAFINSIPKSTAGKILRRE 480 (493)
Q Consensus 401 ie~~l~~~~~v~~~~v~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~l~~~l~~~~~p~~~~~~~~lP~t~~GK~~r~~ 480 (493)
||+.+.++++|.++++++..++..++.+++++++.++...+.+++.++++++++++++|..+++++++|+|++||++|++
T Consensus 433 iE~~l~~~~~v~~~~v~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~~~l~~~~~p~~i~~v~~~p~t~~gKi~r~~ 512 (523)
T PRK08316 433 VEEALYTHPAVAEVAVIGLPDPKWIEAVTAVVVPKAGATVTEDELIAHCRARLAGFKVPKRVIFVDELPRNPSGKILKRE 512 (523)
T ss_pred HHHHHHhCCChheEeEecccCcccCCeEEEEEEECCCCCCCHHHHHHHHHHhcccCCCCcEEEEecCCCCCCccceeHHH
Confidence 99999999999999999999988888999999988776677889999999999999999999999999999999999999
Q ss_pred HHHHHhhC
Q 011116 481 LVTHAISG 488 (493)
Q Consensus 481 l~~~~~~~ 488 (493)
|++++.+.
T Consensus 513 l~~~~~~~ 520 (523)
T PRK08316 513 LRERYAGA 520 (523)
T ss_pred HHHHHHhh
Confidence 99998653
No 44
>PRK07470 acyl-CoA synthetase; Validated
Probab=100.00 E-value=2e-62 Score=503.12 Aligned_cols=462 Identities=26% Similarity=0.419 Sum_probs=386.5
Q ss_pred hHHHHHHhhCCCCCCCEEEEECCCCCCcHHHHHHHHHHcCCeeccCCCCCCHHHHHHHHhhcCCeEEEEcCCCcccCCC-
Q 011116 18 TLSHALSKRDSLCRKTTSLTSSPLPPSTSPVLYFSLLSLGVVISPANPLSSTSEVSHQIQLSKPSIAFATSHTSYKLPS- 96 (493)
Q Consensus 18 ~lA~~L~~~~gl~~gd~V~l~~~~~~~~~~~~~lA~~~~G~~~v~i~~~~~~~~l~~~l~~~~~~~il~~~~~~~~~~~- 96 (493)
++|+.| .+.|+++||+|+++++ |+++++++++||+++|++++++++.++.+++.++++.++++.++++.+....+..
T Consensus 44 ~~a~~L-~~~g~~~g~~v~i~~~-~~~~~~~~~lA~~~~G~~~v~l~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~ 121 (528)
T PRK07470 44 ALAAAL-AARGVRKGDRILVHSR-NCNQMFESMFAAFRLGAVWVPTNFRQTPDEVAYLAEASGARAMICHADFPEHAAAV 121 (528)
T ss_pred HHHHHH-HHhCCCCCCEEEEEcC-CCHHHHHHHHHHHhCCeEEEecCccCCHHHHHHHHHhcCceEEEEcchhHHHHHHH
Confidence 349999 7789999999999999 9999999999999999999999999999999999999999999999765432211
Q ss_pred ------CCcEEEecC----chhhhhhccCcccccccCCCCCCCCCCeEEEEccCCCCCCccceecchHHHHHHHHHhhhh
Q 011116 97 ------NLRTILMDS----PEFISLLNQNEDVADFANSNMTVYQSDPAAILYSSGTTGKVKGVLLSHLNVIAIIAGYYHV 166 (493)
Q Consensus 97 ------~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~TSGTTG~pK~v~~t~~~~~~~~~~~~~~ 166 (493)
....+.+.. ..+..+..... ...........+++++++|||||||.||+|.++|.++...+......
T Consensus 122 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~a~i~~TSGTTG~PK~v~~s~~~l~~~~~~~~~~ 198 (528)
T PRK07470 122 RAASPDLTHVVAIGGARAGLDYEALVARHL---GARVANAAVDHDDPCWFFFTSGTTGRPKAAVLTHGQMAFVITNHLAD 198 (528)
T ss_pred HhhCCcCceEEEeCCCcccccHHHHHhcCC---CCCCCcccCCCCCeEEEEeCCCCCCCCcEEEEehhhHHHHHHHHHHH
Confidence 112333322 23333333221 00112234567899999999999999999999999997655443222
Q ss_pred cccCCCCCCCCCCcEEEEecChhHHHHHHHHHHHHhcCCeEEEec--CCCHHHHHHHHHhcCeeecccChHHHHHHHhcc
Q 011116 167 TEETDPNEGPPPHPVSFFTLPMFHVFGFFMLVRAASKGETLVFME--RFDFEKMLKAVENYRVTYMPVSPPLIVAFINSK 244 (493)
Q Consensus 167 ~~~~~~~~~~~~~~~~~~~~pl~~~~g~~~~~~~l~~G~~~~~~~--~~~~~~~~~~l~~~~~t~l~~~P~~~~~l~~~~ 244 (493)
.. .+..+.|+++...|++|..++..++ .+..|++.++.+ .++++.+++.++++++|++.++|++++.+.+..
T Consensus 199 ~~-----~~~~~~d~~l~~~p~~~~~~~~~~~-~~~~g~~~~~~~~~~~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~ 272 (528)
T PRK07470 199 LM-----PGTTEQDASLVVAPLSHGAGIHQLC-QVARGAATVLLPSERFDPAEVWALVERHRVTNLFTVPTILKMLVEHP 272 (528)
T ss_pred hc-----cCCCcccEEEEeccchhHHHHHHHH-HHhcCceEEEecccCcCHHHHHHHHHhcCCeEEechHHHHHHHHhCc
Confidence 21 1346789999999999999986554 566777776653 578999999999999999999999999998876
Q ss_pred cCCCCCCCCeeEEEecCCCCCHHHHHHHHHhCCCCceeccccccccCCccccccCC----C--CCCCCCccccccCCceE
Q 011116 245 LTDKYDLSSLQLLGCGGAPLGKEVTLKFKEKFPNVEIRQGYGLTETGGAGSRVIGP----D--EAERHGSVGRLAELMEA 318 (493)
Q Consensus 245 ~~~~~~l~~lr~v~~~Ge~~~~~~~~~~~~~~~~~~v~~~yG~tE~g~~~~~~~~~----~--~~~~~~~~g~p~~~~~~ 318 (493)
......++++|.+++||+++++++.+++.+.+ +..+++.||+||++..+...... . .....+++|.|.+++++
T Consensus 273 ~~~~~~~~~lr~~~~gG~~l~~~~~~~~~~~~-g~~~~~~YG~TE~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~g~~~ 351 (528)
T PRK07470 273 AVDRYDHSSLRYVIYAGAPMYRADQKRALAKL-GKVLVQYFGLGEVTGNITVLPPALHDAEDGPDARIGTCGFERTGMEV 351 (528)
T ss_pred CcCCCCCcceEEEEEcCCCCCHHHHHHHHHHh-CcHHHHhCCCcccCCceeecchhhccccccccceeeccCcccCCcEE
Confidence 65566788999999999999999999999988 78899999999998755432110 0 12234688999999999
Q ss_pred EEEcCCCCccCCCCCceEEEEeCccccccccCCcccccccccCCCeeeccceEEEcCCCcEEEEcccCCeEEeCceeeCh
Q 011116 319 KIVDPATGEALPPGQKGELWLRGPTIMKGYVGDDKATSETVHSEGWLKTGDLCYFDSNGFLFIVDRLKELIKYKAYQVPP 398 (493)
Q Consensus 319 ~i~d~~~~~~~~~g~~Gel~v~~~~~~~gy~~~~~~~~~~~~~~~~~~TgD~~~~~~~g~~~~~GR~~d~i~~~G~~i~~ 398 (493)
+++| +++++++.|+.|||+++|+.++.||+++++.+...| .++||+|||+++++++|++++.||.||+||.+|++++|
T Consensus 352 ~i~d-~~~~~~~~g~~Gel~i~~~~~~~gy~~~~~~~~~~~-~~~~~~TGDl~~~~~~g~l~~~GR~dd~i~~~G~~v~~ 429 (528)
T PRK07470 352 QIQD-DEGRELPPGETGEICVIGPAVFAGYYNNPEANAKAF-RDGWFRTGDLGHLDARGFLYITGRASDMYISGGSNVYP 429 (528)
T ss_pred EEEC-CCCCCCCCCCceEEEEeCCccchhhcCCHHHHHhhh-cCCcEecceeEEEccCCeEEEeCCccceEEeCCEEECH
Confidence 9999 678899999999999999999999999999888877 48999999999999999999999999999999999999
Q ss_pred HHHHHHHhcCCCcceEEEEeeeCCCCCeeEEEEEEeCCCCCCCHHHHHHHHHhcCCCCCCcceEEEeccccCCCCCccch
Q 011116 399 VELEHLLHSNPEIADAAVIPYPDEEAGQIPMAFVVRKPGSNITEAEIMDFIAKQVAPYKKIRRVAFINSIPKSTAGKILR 478 (493)
Q Consensus 399 ~~ie~~l~~~~~v~~~~v~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~l~~~l~~~~~p~~~~~~~~lP~t~~GK~~r 478 (493)
.+||++|.+++.|.+++|++.+++..++.++++++..++...+.++++++++++|+++++|..+++++++|+|++||++|
T Consensus 430 ~~IE~~l~~~~~v~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~P~~~~~~~~iP~t~~GKi~r 509 (528)
T PRK07470 430 REIEEKLLTHPAVSEVAVLGVPDPVWGEVGVAVCVARDGAPVDEAELLAWLDGKVARYKLPKRFFFWDALPKSGYGKITK 509 (528)
T ss_pred HHHHHHHHhCCCceEEEEEeccCcccCceeEEEEEECCCCCCCHHHHHHHHHHhhhcCCCCcEEEEeccCCCCCcccccH
Confidence 99999999999999999999988877888888888877666788999999999999999999999999999999999999
Q ss_pred HHHHHHHhhCCCCCC
Q 011116 479 RELVTHAISGNLSKL 493 (493)
Q Consensus 479 ~~l~~~~~~~~~~~~ 493 (493)
+.|++++.++.+-+|
T Consensus 510 ~~l~~~~~~~~~~~~ 524 (528)
T PRK07470 510 KMVREELEERGLLDL 524 (528)
T ss_pred HHHHHHHHhcccccc
Confidence 999999999887654
No 45
>PRK03640 O-succinylbenzoic acid--CoA ligase; Provisional
Probab=100.00 E-value=2.4e-62 Score=497.53 Aligned_cols=444 Identities=30% Similarity=0.454 Sum_probs=380.7
Q ss_pred hHHHHHHhhCCCCCCCEEEEECCCCCCcHHHHHHHHHHcCCeeccCCCCCCHHHHHHHHhhcCCeEEEEcCCCcccCCCC
Q 011116 18 TLSHALSKRDSLCRKTTSLTSSPLPPSTSPVLYFSLLSLGVVISPANPLSSTSEVSHQIQLSKPSIAFATSHTSYKLPSN 97 (493)
Q Consensus 18 ~lA~~L~~~~gl~~gd~V~l~~~~~~~~~~~~~lA~~~~G~~~v~i~~~~~~~~l~~~l~~~~~~~il~~~~~~~~~~~~ 97 (493)
++|++| .+.|+++||+|+++++ |+++++++++||+++|++++|+++..+.+++..++++++++.++++......+...
T Consensus 39 ~~a~~L-~~~g~~~~~~v~i~~~-~~~~~~~~~la~~~~G~~~v~i~~~~~~~~~~~~~~~~~~~~vi~~~~~~~~~~~~ 116 (483)
T PRK03640 39 SVAGKL-AALGVKKGDRVALLMK-NGMEMILVIHALQQLGAVAVLLNTRLSREELLWQLDDAEVKCLITDDDFEAKLIPG 116 (483)
T ss_pred HHHHHH-HHcCCCCCCEEEEECC-CCHHHHHHHHHHHhCCcEEEecCcCCCHHHHHHHHHhCCCCEEEEcchhhHHHhhh
Confidence 359999 7789999999999999 99999999999999999999999999999999999999999999987644433221
Q ss_pred CcEEEecCchhhhhhccCcccccccCCCCCCCCCCeEEEEccCCCCCCccceecchHHHHHHHHHhhhhcccCCCCCCCC
Q 011116 98 LRTILMDSPEFISLLNQNEDVADFANSNMTVYQSDPAAILYSSGTTGKVKGVLLSHLNVIAIIAGYYHVTEETDPNEGPP 177 (493)
Q Consensus 98 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~TSGTTG~pK~v~~t~~~~~~~~~~~~~~~~~~~~~~~~~ 177 (493)
.. ..+.++..... ...........+++++++|||||||.||+|.++|.++...+......+ ++.
T Consensus 117 ~~------~~~~~~~~~~~---~~~~~~~~~~~~~~a~i~~TSGtTG~PK~v~~s~~~~~~~~~~~~~~~-------~~~ 180 (483)
T PRK03640 117 IS------VKFAELMNGPK---EEAEIQEEFDLDEVATIMYTSGTTGKPKGVIQTYGNHWWSAVGSALNL-------GLT 180 (483)
T ss_pred cc------ccHHHHhhccc---ccCCCCCCCCCCCeEEEEeCCCcCCCCcEEEEecHHHHHHHHHHHHhc-------CCC
Confidence 11 11333332221 111222345678999999999999999999999999887766655554 348
Q ss_pred CCcEEEEecChhHHHHHHHHHHHHhcCCeEEEecCCCHHHHHHHHHhcCeeecccChHHHHHHHhcccCCCCCCCCeeEE
Q 011116 178 PHPVSFFTLPMFHVFGFFMLVRAASKGETLVFMERFDFEKMLKAVENYRVTYMPVSPPLIVAFINSKLTDKYDLSSLQLL 257 (493)
Q Consensus 178 ~~~~~~~~~pl~~~~g~~~~~~~l~~G~~~~~~~~~~~~~~~~~l~~~~~t~l~~~P~~~~~l~~~~~~~~~~l~~lr~v 257 (493)
+++++++.+|++|+.++..++.++..|+++++.+..++..+++.++++++|++.++|+++..|++..... ....++|.+
T Consensus 181 ~~d~~l~~~p~~~~~g~~~~~~~l~~G~~~~~~~~~~~~~~~~~i~~~~~t~l~~~P~~~~~l~~~~~~~-~~~~~lr~~ 259 (483)
T PRK03640 181 EDDCWLAAVPIFHISGLSILMRSVIYGMRVVLVEKFDAEKINKLLQTGGVTIISVVSTMLQRLLERLGEG-TYPSSFRCM 259 (483)
T ss_pred cCcEEEEecCHHHHHHHHHHHHHHhcCCEEEecCCCCHHHHHHHHHHhCCcEEEeHHHHHHHHHhCcCcc-ccCCcceEE
Confidence 8999999999999999988899999999999998889999999999999999999999999998765433 334689999
Q ss_pred EecCCCCCHHHHHHHHHhCCCCceeccccccccCCccccccCCCCCCCCCccccccCCceEEEEcCCCCccCCCCCceEE
Q 011116 258 GCGGAPLGKEVTLKFKEKFPNVEIRQGYGLTETGGAGSRVIGPDEAERHGSVGRLAELMEAKIVDPATGEALPPGQKGEL 337 (493)
Q Consensus 258 ~~~Ge~~~~~~~~~~~~~~~~~~v~~~yG~tE~g~~~~~~~~~~~~~~~~~~g~p~~~~~~~i~d~~~~~~~~~g~~Gel 337 (493)
+++|+++++++.+.+++. ++++++.||+||++...+...........+++|+|.+++++++.++ +++++.|+.|||
T Consensus 260 ~~~g~~~~~~~~~~~~~~--~~~~~~~YG~tE~~~~~~~~~~~~~~~~~~~vG~p~~~~~~~i~~~--~~~~~~g~~Gel 335 (483)
T PRK03640 260 LLGGGPAPKPLLEQCKEK--GIPVYQSYGMTETASQIVTLSPEDALTKLGSAGKPLFPCELKIEKD--GVVVPPFEEGEI 335 (483)
T ss_pred EEcCCCCCHHHHHHHHHh--CCCeeeeeccCcccccccccCcccccccCCCcccccCCcEEEEecC--CCcCCCCCceEE
Confidence 999999999999988875 8999999999998765443233223345688999999999999984 378999999999
Q ss_pred EEeCccccccccCCcccccccccCCCeeeccceEEEcCCCcEEEEcccCCeEEeCceeeChHHHHHHHhcCCCcceEEEE
Q 011116 338 WLRGPTIMKGYVGDDKATSETVHSEGWLKTGDLCYFDSNGFLFIVDRLKELIKYKAYQVPPVELEHLLHSNPEIADAAVI 417 (493)
Q Consensus 338 ~v~~~~~~~gy~~~~~~~~~~~~~~~~~~TgD~~~~~~~g~~~~~GR~~d~i~~~G~~i~~~~ie~~l~~~~~v~~~~v~ 417 (493)
+++|+.++.||+++++.+...| .++||+|||++++++||.+++.||++|++|.+|.+|++.+||+++.++++|.+++++
T Consensus 336 ~v~g~~~~~gy~~~~~~~~~~~-~~~~~~tGDl~~~~~~g~l~~~GR~~~~i~~~G~~v~~~~ie~~i~~~~~v~~~~v~ 414 (483)
T PRK03640 336 VVKGPNVTKGYLNREDATRETF-QDGWFKTGDIGYLDEEGFLYVLDRRSDLIISGGENIYPAEIEEVLLSHPGVAEAGVV 414 (483)
T ss_pred EEECcchhhhhcCCHHHHHHHH-hcCCeeccceEEEcCCCCEEEeecccCeEEeCCEEECHHHHHHHHHhCCCeeEEEEE
Confidence 9999999999999999888887 589999999999999999999999999999999999999999999999999999999
Q ss_pred eeeCCCCCeeEEEEEEeCCCCCCCHHHHHHHHHhcCCCCCCcceEEEeccccCCCCCccchHHHHHHHhh
Q 011116 418 PYPDEEAGQIPMAFVVRKPGSNITEAEIMDFIAKQVAPYKKIRRVAFINSIPKSTAGKILRRELVTHAIS 487 (493)
Q Consensus 418 ~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~l~~~l~~~~~p~~~~~~~~lP~t~~GK~~r~~l~~~~~~ 487 (493)
+..++..++.++++++.. ...+.++++++++++|+++++|..+++++++|+|++||++|+.|++++.+
T Consensus 415 ~~~~~~~~~~~~~~~~~~--~~~~~~~l~~~~~~~l~~~~~p~~i~~~~~iP~t~~gK~~r~~l~~~~~~ 482 (483)
T PRK03640 415 GVPDDKWGQVPVAFVVKS--GEVTEEELRHFCEEKLAKYKVPKRFYFVEELPRNASGKLLRHELKQLVEE 482 (483)
T ss_pred eCCCcccCCceEEEEEeC--CCCCHHHHHHHHHHhccCCCCCcEEEEeCCCCCCCccceeHHHHHHHHhh
Confidence 988887788888878754 35778899999999999999999999999999999999999999999874
No 46
>PRK07867 acyl-CoA synthetase; Validated
Probab=100.00 E-value=3.5e-62 Score=499.74 Aligned_cols=449 Identities=24% Similarity=0.356 Sum_probs=379.5
Q ss_pred hHHHHHHhhCCCCCCCEEEEECCCCCCcHHHHHHHHHHcCCeeccCCCCCCHHHHHHHHhhcCCeEEEEcCCCcccCCC-
Q 011116 18 TLSHALSKRDSLCRKTTSLTSSPLPPSTSPVLYFSLLSLGVVISPANPLSSTSEVSHQIQLSKPSIAFATSHTSYKLPS- 96 (493)
Q Consensus 18 ~lA~~L~~~~gl~~gd~V~l~~~~~~~~~~~~~lA~~~~G~~~v~i~~~~~~~~l~~~l~~~~~~~il~~~~~~~~~~~- 96 (493)
++|++|+.+.|+++|++|+++++ |+++++++++||+++|++++|+++..+.+++.++++++++++++++++....+..
T Consensus 40 ~lA~~L~~~~~~~~~~~V~i~~~-n~~~~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~li~~~~~~~~~~~~ 118 (529)
T PRK07867 40 ARAAALRARLDPTRPPHVGVLLD-NTPEFSLLLGAAALSGIVPVGLNPTRRGAALARDIAHADCQLVLTESAHAELLDGL 118 (529)
T ss_pred HHHHHHHHhhCCCCCCEEEEECC-CCHHHHHHHHHHHhcCCEEEEecCCCChHHHHHHHHhCCCeEEEECHhHHHHHHhh
Confidence 35999943348999999999999 9999999999999999999999999999999999999999999999866553322
Q ss_pred --CCcEEEecCchhhhhhccCcccccccCCCCCCCCCCeEEEEccCCCCCCccceecchHHHHHHHHHhhhhcccCCCCC
Q 011116 97 --NLRTILMDSPEFISLLNQNEDVADFANSNMTVYQSDPAAILYSSGTTGKVKGVLLSHLNVIAIIAGYYHVTEETDPNE 174 (493)
Q Consensus 97 --~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~TSGTTG~pK~v~~t~~~~~~~~~~~~~~~~~~~~~~ 174 (493)
...++.++...|.+.+.... ..........++++++++|||||||.||+|.++|.++..........+
T Consensus 119 ~~~~~~~~~~~~~~~~~l~~~~---~~~~~~~~~~~~~~~~i~~TSGTTG~PKgv~~s~~~l~~~~~~~~~~~------- 188 (529)
T PRK07867 119 DPGVRVINVDSPAWADELAAHR---DAEPPFRVADPDDLFMLIFTSGTSGDPKAVRCTHRKVASAGVMLAQRF------- 188 (529)
T ss_pred ccCceEEEeccccHHHHhcccC---CCCCCcccCCccceEEEEECCCCCCCCcEEEecHHHHHHHHHHHHHhh-------
Confidence 33445555444554443321 111222345678999999999999999999999999988777766665
Q ss_pred CCCCCcEEEEecChhHHHHH-HHHHHHHhcCCeEEEecCCCHHHHHHHHHhcCeeecccChHHHHHHHhcccCCCCCCCC
Q 011116 175 GPPPHPVSFFTLPMFHVFGF-FMLVRAASKGETLVFMERFDFEKMLKAVENYRVTYMPVSPPLIVAFINSKLTDKYDLSS 253 (493)
Q Consensus 175 ~~~~~~~~~~~~pl~~~~g~-~~~~~~l~~G~~~~~~~~~~~~~~~~~l~~~~~t~l~~~P~~~~~l~~~~~~~~~~l~~ 253 (493)
++.++|++++.+|++|..++ ..++.++..|+++++.+.+++..+++.++++++|++.++|+.+..++..........++
T Consensus 189 ~~~~~d~~l~~~pl~~~~~~~~~~~~~l~~G~~~~~~~~~~~~~~~~~i~~~~vt~~~~~p~~~~~ll~~~~~~~~~~~~ 268 (529)
T PRK07867 189 GLGPDDVCYVSMPLFHSNAVMAGWAVALAAGASIALRRKFSASGFLPDVRRYGATYANYVGKPLSYVLATPERPDDADNP 268 (529)
T ss_pred CCCcccEEEEecchhHHHHHHHHHHHHHhcCceEEecCCCCHHHHHHHHHHhCCeEEeccHHHHHHHHhCCCcccccccc
Confidence 34788999999999999998 45667899999999988889999999999999999999999999888765433333456
Q ss_pred eeEEEecCCCCCHHHHHHHHHhCCCCceeccccccccCCccccccCCCCCCCCCccccccCCceEEEEcCCCCccCCCCC
Q 011116 254 LQLLGCGGAPLGKEVTLKFKEKFPNVEIRQGYGLTETGGAGSRVIGPDEAERHGSVGRLAELMEAKIVDPATGEALPPGQ 333 (493)
Q Consensus 254 lr~v~~~Ge~~~~~~~~~~~~~~~~~~v~~~yG~tE~g~~~~~~~~~~~~~~~~~~g~p~~~~~~~i~d~~~~~~~~~g~ 333 (493)
+|. ++||+.+++.. .++.+.+ ++++++.||+||++...... .....+++|.|.++ ++++|+++++.++.|+
T Consensus 269 lr~-~~gg~~~~~~~-~~~~~~~-g~~l~~~YG~TE~~~~~~~~----~~~~~~~~g~~~~~--~~i~~~~~~~~~~~g~ 339 (529)
T PRK07867 269 LRI-VYGNEGAPGDI-ARFARRF-GCVVVDGFGSTEGGVAITRT----PDTPPGALGPLPPG--VAIVDPDTGTECPPAE 339 (529)
T ss_pred eEE-EecCCCChHHH-HHHHHHh-CCcEEEeecccccccccccC----CCCCCCCcCCCCCC--EEEEECCCCCCCCCCc
Confidence 774 56888887765 6677778 89999999999998654421 11245678999998 7788877888888888
Q ss_pred ------------ceEEEE-eCccccccccCCcccccccccCCCeeeccceEEEcCCCcEEEEcccCCeEEeCceeeChHH
Q 011116 334 ------------KGELWL-RGPTIMKGYVGDDKATSETVHSEGWLKTGDLCYFDSNGFLFIVDRLKELIKYKAYQVPPVE 400 (493)
Q Consensus 334 ------------~Gel~v-~~~~~~~gy~~~~~~~~~~~~~~~~~~TgD~~~~~~~g~~~~~GR~~d~i~~~G~~i~~~~ 400 (493)
.|||++ +|+.++.||+++++.+.+.+ .+|||+|||+++++++|.+++.||.+|+|+++|++|+|.+
T Consensus 340 ~~~~~~~~~~~~~Gel~i~~g~~~~~gy~~~~~~~~~~~-~~g~~~TGD~~~~~~~g~l~~~GR~~d~i~~~G~~v~p~e 418 (529)
T PRK07867 340 DADGRLLNADEAIGELVNTAGPGGFEGYYNDPEADAERM-RGGVYWSGDLAYRDADGYAYFAGRLGDWMRVDGENLGTAP 418 (529)
T ss_pred cccccccccCCcceEEEEecCCcccccccCChHhhhhhh-cCCeEeeccEEEEeCCCcEEEeccccCeEEECCEEeCHHH
Confidence 899999 99999999999999888877 4899999999999999999999999999999999999999
Q ss_pred HHHHHhcCCCcceEEEEeeeCCCCCeeEEEEEEeCCCCCCCHHHHHHHHHhc--CCCCCCcceEEEeccccCCCCCccch
Q 011116 401 LEHLLHSNPEIADAAVIPYPDEEAGQIPMAFVVRKPGSNITEAEIMDFIAKQ--VAPYKKIRRVAFINSIPKSTAGKILR 478 (493)
Q Consensus 401 ie~~l~~~~~v~~~~v~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~l~~~--l~~~~~p~~~~~~~~lP~t~~GK~~r 478 (493)
||++|.++|+|.+++|++.+++..++.+++++++.++...+.+++++.++.+ |+++++|..+.+++++|+|++||++|
T Consensus 419 IE~~l~~~p~V~~~~V~g~~~~~~g~~~~a~vv~~~~~~~~~~~l~~~~~~~~~l~~~~~P~~i~~~~~iP~t~~GKv~r 498 (529)
T PRK07867 419 IERILLRYPDATEVAVYAVPDPVVGDQVMAALVLAPGAKFDPDAFAEFLAAQPDLGPKQWPSYVRVCAELPRTATFKVLK 498 (529)
T ss_pred HHHHHHhCCCeeEEEEEeccCCCCCeeEEEEEEECCCCCCCHHHHHHHHHhhccCCcccCCeEEEEeeccCCCCCcceeH
Confidence 9999999999999999999998889999999999888778889999999875 99999999999999999999999999
Q ss_pred HHHHHHHhh
Q 011116 479 RELVTHAIS 487 (493)
Q Consensus 479 ~~l~~~~~~ 487 (493)
+.|++++..
T Consensus 499 ~~L~~~~~~ 507 (529)
T PRK07867 499 RQLSAEGVD 507 (529)
T ss_pred HHHHHhcCC
Confidence 999998754
No 47
>PLN02614 long-chain acyl-CoA synthetase
Probab=100.00 E-value=1.6e-63 Score=520.07 Aligned_cols=455 Identities=21% Similarity=0.289 Sum_probs=355.1
Q ss_pred HHHHHHhhCCCCCCCEEEEECCCCCCcHHHHHHHHHHcCCeeccCCCCCCHHHHHHHHhhcCCeEEEEcCCCcccCCC--
Q 011116 19 LSHALSKRDSLCRKTTSLTSSPLPPSTSPVLYFSLLSLGVVISPANPLSSTSEVSHQIQLSKPSIAFATSHTSYKLPS-- 96 (493)
Q Consensus 19 lA~~L~~~~gl~~gd~V~l~~~~~~~~~~~~~lA~~~~G~~~v~i~~~~~~~~l~~~l~~~~~~~il~~~~~~~~~~~-- 96 (493)
+|++| .+.|+++||+|+++++ |+++|+++++||+++|++++|+++.++.+++.++++++++++++++.+....+..
T Consensus 92 lA~~L-~~~Gv~~Gd~Vai~~~-n~~e~~~~~lA~~~~Gav~vpl~~~~~~~~l~~il~~~~~~~vi~~~~~~~~~~~~~ 169 (666)
T PLN02614 92 LGNSL-RSVGVKDEAKCGIYGA-NSPEWIISMEACNAHGLYCVPLYDTLGAGAVEFIISHSEVSIVFVEEKKISELFKTC 169 (666)
T ss_pred HHHHH-HHcCCCCCCEEEEEcC-CCHHHHHHHHHHHHcCCEEEEecCCCCHHHHHHHHhccCCCEEEECHHHHHHHHHhc
Confidence 59999 7889999999999999 9999999999999999999999999999999999999999999998654332211
Q ss_pred -----CCc-EEEecCc----------------hhhhhhccCcccccccCCCCCCCCCCeEEEEccCCCCCCccceecchH
Q 011116 97 -----NLR-TILMDSP----------------EFISLLNQNEDVADFANSNMTVYQSDPAAILYSSGTTGKVKGVLLSHL 154 (493)
Q Consensus 97 -----~~~-~~~~~~~----------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~TSGTTG~pK~v~~t~~ 154 (493)
.++ ++.++.. .+.+++.... ..........++|+++|+|||||||.||||+++|+
T Consensus 170 ~~~~~~l~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~d~a~I~yTSGTTG~PKGV~lth~ 246 (666)
T PLN02614 170 PNSTEYMKTVVSFGGVSREQKEEAETFGLVIYAWDEFLKLGE---GKQYDLPIKKKSDICTIMYTSGTTGDPKGVMISNE 246 (666)
T ss_pred ccccccceEEEEeCCCChHHhhhhhhcCcEEEEHHHHHhhcc---cCCCCCCCCCCCceEEEEEcCCCCCCCcEEEEecH
Confidence 122 3333321 1222222111 00111123457899999999999999999999999
Q ss_pred HHHHHHHHhhhhcccCCCCCCCCCCcEEEEecChhHHHHHHHHHHHHhcCCeEEEecCCCHHHHHHHHHhcCeeecccCh
Q 011116 155 NVIAIIAGYYHVTEETDPNEGPPPHPVSFFTLPMFHVFGFFMLVRAASKGETLVFMERFDFEKMLKAVENYRVTYMPVSP 234 (493)
Q Consensus 155 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pl~~~~g~~~~~~~l~~G~~~~~~~~~~~~~~~~~l~~~~~t~l~~~P 234 (493)
++...+......+.. ...++.++|++++.+|++|.++....+.++..|+++++.+ .++..+++.+++++||+++++|
T Consensus 247 nl~~~~~~~~~~~~~--~~~~~~~~d~~l~~lPl~H~~~~~~~~~~l~~G~~v~~~~-~~~~~~~~~i~~~~~T~~~~vP 323 (666)
T PLN02614 247 SIVTLIAGVIRLLKS--ANAALTVKDVYLSYLPLAHIFDRVIEECFIQHGAAIGFWR-GDVKLLIEDLGELKPTIFCAVP 323 (666)
T ss_pred HHHHHHHHHHhhccc--cccCCCCCcEEEEeccHHHHHHHHHHHHHHHhCCEEEEeC-CCHHHHHHHHHHhCCeEEEecH
Confidence 998876655443311 0013478899999999999999866667788999988875 4889999999999999999999
Q ss_pred HHHHHHHhcccC---------------------------------CC-----------CCC-CCeeEEEecCCCCCHHHH
Q 011116 235 PLIVAFINSKLT---------------------------------DK-----------YDL-SSLQLLGCGGAPLGKEVT 269 (493)
Q Consensus 235 ~~~~~l~~~~~~---------------------------------~~-----------~~l-~~lr~v~~~Ge~~~~~~~ 269 (493)
.++..+...... .. ..+ +++|.+++||+++++++
T Consensus 324 ~~~~~l~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lg~~lr~~~~Gga~l~~~~- 402 (666)
T PLN02614 324 RVLDRVYSGLQKKLSDGGFLKKFVFDSAFSYKFGNMKKGQSHVEASPLCDKLVFNKVKQGLGGNVRIILSGAAPLASHV- 402 (666)
T ss_pred HHHHHHHHHHHHHHhccCHHHHHHHHHHHHHHHHHHHcCCCCcccchHHHHHHHHHHHHHhCCcEEEEEEcCCCCCHHH-
Confidence 999887642110 00 001 58999999999999876
Q ss_pred HHHHHhCCCCceeccccccccCCccccccCCCCCCCCCccccccCCceEEEEcC-C-CCccCCCCCceEEEEeCcccccc
Q 011116 270 LKFKEKFPNVEIRQGYGLTETGGAGSRVIGPDEAERHGSVGRLAELMEAKIVDP-A-TGEALPPGQKGELWLRGPTIMKG 347 (493)
Q Consensus 270 ~~~~~~~~~~~v~~~yG~tE~g~~~~~~~~~~~~~~~~~~g~p~~~~~~~i~d~-~-~~~~~~~g~~Gel~v~~~~~~~g 347 (493)
..+.+.++++.+++.||+||+++..+. .........+++|+|+++++++|+|. + .++++++|+.|||+++||.++.|
T Consensus 403 ~~~~~~~~~~~i~~~YG~TE~~~~~~~-~~~~~~~~~gsvG~p~pg~evki~d~~~~~~~~~~~g~~GEl~vrGp~v~~G 481 (666)
T PLN02614 403 ESFLRVVACCHVLQGYGLTESCAGTFV-SLPDELDMLGTVGPPVPNVDIRLESVPEMEYDALASTPRGEICIRGKTLFSG 481 (666)
T ss_pred HHHHHHhcCCCEEeeCchHhhhhheee-eccccCCcCCcccCcCCceEEEEeeecccCcccCCCCCCceEEEcCCccccc
Confidence 556666656899999999998764433 12222234678999999999999983 3 24678899999999999999999
Q ss_pred ccCCcccccccccCCCeeeccceEEEcCCCcEEEEcccCCeEEe-CceeeChHHHHHHHhcCCCcceEEEEeeeCCCCCe
Q 011116 348 YVGDDKATSETVHSEGWLKTGDLCYFDSNGFLFIVDRLKELIKY-KAYQVPPVELEHLLHSNPEIADAAVIPYPDEEAGQ 426 (493)
Q Consensus 348 y~~~~~~~~~~~~~~~~~~TgD~~~~~~~g~~~~~GR~~d~i~~-~G~~i~~~~ie~~l~~~~~v~~~~v~~~~~~~~~~ 426 (493)
|+++|+.|.+.| .+|||+|||+|++|+||++++.||.+|+||+ +|++|+|.+||++|.++|.|.+++|++.... .
T Consensus 482 Y~~~pe~T~~~f-~dGw~~TGDlg~~d~dG~l~i~gR~kd~ik~~~G~~V~p~eIE~~l~~~p~V~~~~V~g~~~~---~ 557 (666)
T PLN02614 482 YYKREDLTKEVL-IDGWLHTGDVGEWQPNGSMKIIDRKKNIFKLSQGEYVAVENIENIYGEVQAVDSVWVYGNSFE---S 557 (666)
T ss_pred ccCCHHHhhhhh-ccCCcccceEEEEcCCCCEEEEEcchhceecCCCeeecHHHHHHHHhcCCCeeEEEEEecCCc---c
Confidence 999999999988 4899999999999999999999999999997 7999999999999999999999999986532 3
Q ss_pred eEEEEEEeCCCC--------CC--C----------HHHHHHHH-----HhcCCCCCCcceEEEecc-c-----cCCCCCc
Q 011116 427 IPMAFVVRKPGS--------NI--T----------EAEIMDFI-----AKQVAPYKKIRRVAFINS-I-----PKSTAGK 475 (493)
Q Consensus 427 ~~~~~v~~~~~~--------~~--~----------~~~l~~~l-----~~~l~~~~~p~~~~~~~~-l-----P~t~~GK 475 (493)
.+++++++.... .. + .+.+++.+ +++|+.+.++++|.++++ + .+|+++|
T Consensus 558 ~l~alvv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~~e~i~~~~l~~~~f~~~ng~lTpt~K 637 (666)
T PLN02614 558 FLVAIANPNQQILERWAAENGVSGDYNALCQNEKAKEFILGELVKMAKEKKMKGFEIIKAIHLDPVPFDMERDLLTPTFK 637 (666)
T ss_pred eEEEEEeCCHHHHHHHHHhcCCCcCHHHHhcCHHHHHHHHHHHHHHHHHcCCCCcceeeEEEEeCCCCCCcCCcCCHhhh
Confidence 578888875320 00 1 11233333 346999999999998753 3 4899999
Q ss_pred cchHHHHHHHhh
Q 011116 476 ILRRELVTHAIS 487 (493)
Q Consensus 476 ~~r~~l~~~~~~ 487 (493)
+.|..+++.+.+
T Consensus 638 ~kR~~i~~~y~~ 649 (666)
T PLN02614 638 KKRPQLLKYYQS 649 (666)
T ss_pred hhHHHHHHHHHH
Confidence 999999888764
No 48
>PRK07786 long-chain-fatty-acid--CoA ligase; Validated
Probab=100.00 E-value=3.1e-62 Score=502.73 Aligned_cols=457 Identities=25% Similarity=0.423 Sum_probs=388.5
Q ss_pred HHHHHHhhCCCCCCCEEEEECCCCCCcHHHHHHHHHHcCCeeccCCCCCCHHHHHHHHhhcCCeEEEEcCCCcccCCC--
Q 011116 19 LSHALSKRDSLCRKTTSLTSSPLPPSTSPVLYFSLLSLGVVISPANPLSSTSEVSHQIQLSKPSIAFATSHTSYKLPS-- 96 (493)
Q Consensus 19 lA~~L~~~~gl~~gd~V~l~~~~~~~~~~~~~lA~~~~G~~~v~i~~~~~~~~l~~~l~~~~~~~il~~~~~~~~~~~-- 96 (493)
+|.+| .+.|+++||+|+++++ |+++++++++||+++|++++|+++..+.+++..+++.++++.++++......+..
T Consensus 55 ~a~~L-~~~g~~~g~~V~i~~~-~~~~~~~~~~a~~~~G~~~vpl~~~~~~~~~~~~l~~~~~~~ii~~~~~~~~~~~~~ 132 (542)
T PRK07786 55 LAGAL-SRRGVGFGDRVLILML-NRTEFVESVLAANMLGAIAVPVNFRLTPPEIAFLVSDCGAHVVVTEAALAPVATAVR 132 (542)
T ss_pred HHHHH-HHcCCCCCCEEEEECC-CCHHHHHHHHHHHHcCeEEEEcCccCCHHHHHHHHHhCCCcEEEEccchHHHHHHhh
Confidence 49999 6789999999999999 9999999999999999999999999999999999999999999998765443211
Q ss_pred ----CCc-EEEecC------chhhhhhccCcccccccCCCCCCCCCCeEEEEccCCCCCCccceecchHHHHHHHHHhhh
Q 011116 97 ----NLR-TILMDS------PEFISLLNQNEDVADFANSNMTVYQSDPAAILYSSGTTGKVKGVLLSHLNVIAIIAGYYH 165 (493)
Q Consensus 97 ----~~~-~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~TSGTTG~pK~v~~t~~~~~~~~~~~~~ 165 (493)
... .+.+++ .++.+++.... . .........+++++++|||||||.||+|.++|.++...+.....
T Consensus 133 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~-~~~~~~~~~~~~a~i~~TSGTTG~PK~v~~s~~~l~~~~~~~~~ 208 (542)
T PRK07786 133 DIVPLLSTVVVAGGSSDDSVLGYEDLLAEAG---P-AHAPVDIPNDSPALIMYTSGTTGRPKGAVLTHANLTGQAMTCLR 208 (542)
T ss_pred hccCccceEEEecCCCcccccCHHHHhhccC---C-CCCCCCCCCCCeEEEEeCCCCCccchhhhhhHHHHHHHHHHHHH
Confidence 122 222221 22333333221 1 11223455678999999999999999999999999887776655
Q ss_pred hcccCCCCCCCCCCcEEEEecChhHHHHHHHHHHHHhcCCeEEEec--CCCHHHHHHHHHhcCeeecccChHHHHHHHhc
Q 011116 166 VTEETDPNEGPPPHPVSFFTLPMFHVFGFFMLVRAASKGETLVFME--RFDFEKMLKAVENYRVTYMPVSPPLIVAFINS 243 (493)
Q Consensus 166 ~~~~~~~~~~~~~~~~~~~~~pl~~~~g~~~~~~~l~~G~~~~~~~--~~~~~~~~~~l~~~~~t~l~~~P~~~~~l~~~ 243 (493)
.++. ...++++++..|++|.+|+..++.++..|+++++.+ .+++..+++.++++++|+++++|+++..++..
T Consensus 209 ~~~~------~~~~~~~~~~~p~~~~~g~~~~~~~l~~G~~~v~~~~~~~~~~~~~~~i~~~~~t~~~~~P~~l~~l~~~ 282 (542)
T PRK07786 209 TNGA------DINSDVGFVGVPLFHIAGIGSMLPGLLLGAPTVIYPLGAFDPGQLLDVLEAEKVTGIFLVPAQWQAVCAE 282 (542)
T ss_pred hcCC------CCCCceEEEecchHHHHHHHHHHHHHHccCEEEEccCCCcCHHHHHHHHHHcCCeEEEehHHHHHHHHhC
Confidence 5532 146789999999999999988999999999999864 56899999999999999999999999999886
Q ss_pred ccCCCCCCCCeeEEEecCCCCCHHHHHHHHHhCCCCceeccccccccCCccccccCCCCCCCCCccccccCCceEEEEcC
Q 011116 244 KLTDKYDLSSLQLLGCGGAPLGKEVTLKFKEKFPNVEIRQGYGLTETGGAGSRVIGPDEAERHGSVGRLAELMEAKIVDP 323 (493)
Q Consensus 244 ~~~~~~~l~~lr~v~~~Ge~~~~~~~~~~~~~~~~~~v~~~yG~tE~g~~~~~~~~~~~~~~~~~~g~p~~~~~~~i~d~ 323 (493)
....... .++|.+++||+++++++.+++.+.|++.++++.||+||++.+.+............++|+|++++.++|+|
T Consensus 283 ~~~~~~~-~~lr~i~~gg~~~~~~~~~~~~~~~~~~~l~~~YG~tE~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~i~d- 360 (542)
T PRK07786 283 QQARPRD-LALRVLSWGAAPASDTLLRQMAATFPEAQILAAFGQTEMSPVTCMLLGEDAIRKLGSVGKVIPTVAARVVD- 360 (542)
T ss_pred cccCccC-cceEEEEECCCCCCHHHHHHHHHHcCCCeEEeeecccccccceEecCcccccccCCCccccCCCceEEEEC-
Confidence 5443332 36999999999999999999999998999999999999987665433333334557899999999999999
Q ss_pred CCCccCCCCCceEEEEeCccccccccCCcccccccccCCCeeeccceEEEcCCCcEEEEcccCCeEEeCceeeChHHHHH
Q 011116 324 ATGEALPPGQKGELWLRGPTIMKGYVGDDKATSETVHSEGWLKTGDLCYFDSNGFLFIVDRLKELIKYKAYQVPPVELEH 403 (493)
Q Consensus 324 ~~~~~~~~g~~Gel~v~~~~~~~gy~~~~~~~~~~~~~~~~~~TgD~~~~~~~g~~~~~GR~~d~i~~~G~~i~~~~ie~ 403 (493)
++++.++.|+.|||+++|+.+.+||+++++.+...| .++||+|||+++++++|.+++.||.+|+||++|.++++.+||+
T Consensus 361 ~~~~~~~~g~~Gel~v~g~~~~~gy~~~~~~~~~~f-~~~~~~TGDl~~~~~~g~~~i~GR~~d~i~~~G~~v~~~eiE~ 439 (542)
T PRK07786 361 ENMNDVPVGEVGEIVYRAPTLMSGYWNNPEATAEAF-AGGWFHSGDLVRQDEEGYVWVVDRKKDMIISGGENIYCAEVEN 439 (542)
T ss_pred CCCCCCcCCCceEEEEEChhhhhhhcCCHHHHHHHh-hCCcccccceEEEcCCceEEEEecccceEEeCCEEECHHHHHH
Confidence 678889999999999999999999999999988888 4799999999999999999999999999999999999999999
Q ss_pred HHhcCCCcceEEEEeeeCCCCCeeEEEEEEeCCCC-CCCHHHHHHHHHhcCCCCCCcceEEEeccccCCCCCccchHHHH
Q 011116 404 LLHSNPEIADAAVIPYPDEEAGQIPMAFVVRKPGS-NITEAEIMDFIAKQVAPYKKIRRVAFINSIPKSTAGKILRRELV 482 (493)
Q Consensus 404 ~l~~~~~v~~~~v~~~~~~~~~~~~~~~v~~~~~~-~~~~~~l~~~l~~~l~~~~~p~~~~~~~~lP~t~~GK~~r~~l~ 482 (493)
+|.++|+|.+++|++...+..++.+++++++.+.. ....+++.+.++++++++++|..+.+++++|+|++||++|+.|+
T Consensus 440 ~l~~~~~v~~~~v~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~l~~~l~~~~~P~~i~~v~~iP~t~~GKv~r~~L~ 519 (542)
T PRK07786 440 VLASHPDIVEVAVIGRADEKWGEVPVAVAAVRNDDAALTLEDLAEFLTDRLARYKHPKALEIVDALPRNPAGKVLKTELR 519 (542)
T ss_pred HHHhCCCccEEEEEeccCcccCceEEEEEEECCCCCCCCHHHHHHHHHhhccCCCCCCEEEEeccCCCCCcccccHHHHH
Confidence 99999999999999988877788888888876543 35678999999999999999999999999999999999999999
Q ss_pred HHHhhCCC
Q 011116 483 THAISGNL 490 (493)
Q Consensus 483 ~~~~~~~~ 490 (493)
+++.+-+.
T Consensus 520 ~~~~~~~~ 527 (542)
T PRK07786 520 ERYGACVN 527 (542)
T ss_pred HHHHhhhc
Confidence 99887543
No 49
>PRK06087 short chain acyl-CoA synthetase; Reviewed
Probab=100.00 E-value=4.8e-62 Score=502.33 Aligned_cols=455 Identities=27% Similarity=0.422 Sum_probs=384.9
Q ss_pred hHHHHHHhhCCCCCCCEEEEECCCCCCcHHHHHHHHHHcCCeeccCCCCCCHHHHHHHHhhcCCeEEEEcCCCcc-----
Q 011116 18 TLSHALSKRDSLCRKTTSLTSSPLPPSTSPVLYFSLLSLGVVISPANPLSSTSEVSHQIQLSKPSIAFATSHTSY----- 92 (493)
Q Consensus 18 ~lA~~L~~~~gl~~gd~V~l~~~~~~~~~~~~~lA~~~~G~~~v~i~~~~~~~~l~~~l~~~~~~~il~~~~~~~----- 92 (493)
++|++| .+.|+++||+|+++++ |+++++++++||+++|++++|+++.++.+++.++++.+++++++++.....
T Consensus 61 ~la~~l-~~~G~~~gd~V~i~~~-n~~~~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~l~~~~~~~~~~~~~ 138 (547)
T PRK06087 61 RLANWL-LAKGIEPGDRVAFQLP-GWCEFTIIYLACLKVGAVSVPLLPSWREAELVWVLNKCQAKMFFAPTLFKQTRPVD 138 (547)
T ss_pred HHHHHH-HHcCCCCCCEEEEECC-CCHHHHHHHHHHHHcCcEEeccchhcCHHHHHHHHHhcCCeEEEEecccccccHHH
Confidence 459999 7799999999999999 999999999999999999999999999999999999999999999764221
Q ss_pred -------cCCCCCcEEEecCc-------hhhhhhccCcccccccCCCCCCCCCCeEEEEccCCCCCCccceecchHHHHH
Q 011116 93 -------KLPSNLRTILMDSP-------EFISLLNQNEDVADFANSNMTVYQSDPAAILYSSGTTGKVKGVLLSHLNVIA 158 (493)
Q Consensus 93 -------~~~~~~~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~TSGTTG~pK~v~~t~~~~~~ 158 (493)
.+.....++.++.. .+..+.... ...........+++++++|||||||.||+|.++|.++..
T Consensus 139 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~d~a~i~~TSGTTG~PK~v~~t~~~l~~ 214 (547)
T PRK06087 139 LILPLQNQLPQLQQIVGVDKLAPATSSLSLSQIIADY----EPLTTAITTHGDELAAVLFTSGTEGLPKGVMLTHNNILA 214 (547)
T ss_pred HHHHHHhhCCCCcEEEEeCCcCCCcCccCHHHHhccC----CcccCCCCCCCCCeEEEEeCCCCCCCCcEEEEecHHHHH
Confidence 11111123332211 122222211 111122345678999999999999999999999999988
Q ss_pred HHHHhhhhcccCCCCCCCCCCcEEEEecChhHHHHH-HHHHHHHhcCCeEEEecCCCHHHHHHHHHhcCeeecccChHHH
Q 011116 159 IIAGYYHVTEETDPNEGPPPHPVSFFTLPMFHVFGF-FMLVRAASKGETLVFMERFDFEKMLKAVENYRVTYMPVSPPLI 237 (493)
Q Consensus 159 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~pl~~~~g~-~~~~~~l~~G~~~~~~~~~~~~~~~~~l~~~~~t~l~~~P~~~ 237 (493)
........+ ++.+++++++..|++|.+++ ..++.++..|+++++.+..++..+++.++++++++++++|+.+
T Consensus 215 ~~~~~~~~~-------~~~~~d~~l~~~pl~h~~g~~~~~~~~l~~g~~~~~~~~~~~~~~~~~i~~~~~t~~~~~~~~~ 287 (547)
T PRK06087 215 SERAYCARL-------NLTWQDVFMMPAPLGHATGFLHGVTAPFLIGARSVLLDIFTPDACLALLEQQRCTCMLGATPFI 287 (547)
T ss_pred HHHHHHHhc-------CCCCCCeEEEecchHHHHHHHHHHHHHHhcCCEEEecCCCCHHHHHHHHHHcCCCEEeccHHHH
Confidence 777665554 34789999999999999997 5688889999999999888999999999999999999998888
Q ss_pred HHHHhcccCCCCCCCCeeEEEecCCCCCHHHHHHHHHhCCCCceeccccccccCCccccccCCCCCCCCCccccccCCce
Q 011116 238 VAFINSKLTDKYDLSSLQLLGCGGAPLGKEVTLKFKEKFPNVEIRQGYGLTETGGAGSRVIGPDEAERHGSVGRLAELME 317 (493)
Q Consensus 238 ~~l~~~~~~~~~~l~~lr~v~~~Ge~~~~~~~~~~~~~~~~~~v~~~yG~tE~g~~~~~~~~~~~~~~~~~~g~p~~~~~ 317 (493)
..++.........++++|.+++||+++++++.+.+.+. ++++++.||+||++...+............+.|.|.+++.
T Consensus 288 ~~~l~~~~~~~~~~~~lr~i~~gG~~~~~~~~~~~~~~--~~~l~~~YG~TE~~~~~~~~~~~~~~~~~~~~G~~~~~~~ 365 (547)
T PRK06087 288 YDLLNLLEKQPADLSALRFFLCGGTTIPKKVARECQQR--GIKLLSVYGSTESSPHAVVNLDDPLSRFMHTDGYAAAGVE 365 (547)
T ss_pred HHHHhccccCCCCCCCeEEEEEcCCCCCHHHHHHHHHc--CCcEEEEecccccCCccccCCCcchhhcCCcCCccCCCce
Confidence 88887765556677899999999999999999988775 8999999999999876654222211223457899999999
Q ss_pred EEEEcCCCCccCCCCCceEEEEeCccccccccCCcccccccccCCCeeeccceEEEcCCCcEEEEcccCCeEEeCceeeC
Q 011116 318 AKIVDPATGEALPPGQKGELWLRGPTIMKGYVGDDKATSETVHSEGWLKTGDLCYFDSNGFLFIVDRLKELIKYKAYQVP 397 (493)
Q Consensus 318 ~~i~d~~~~~~~~~g~~Gel~v~~~~~~~gy~~~~~~~~~~~~~~~~~~TgD~~~~~~~g~~~~~GR~~d~i~~~G~~i~ 397 (493)
++++| +++.+++.|+.|||+++|+.++.||+++++.+...++.++||+|||+++++++|.+++.||.+|+|+.+|++++
T Consensus 366 ~~i~d-~~~~~~~~g~~Gel~v~g~~~~~gy~~~~~~~~~~~~~~g~~~TGDl~~~~~~g~l~i~GR~~d~i~~~G~~v~ 444 (547)
T PRK06087 366 IKVVD-EARKTLPPGCEGEEASRGPNVFMGYLDEPELTARALDEEGWYYSGDLCRMDEAGYIKITGRKKDIIVRGGENIS 444 (547)
T ss_pred EEEEc-CCCCCCcCCCcceEEEecccccccccCCHHHHHHHhCCCCCcCcCceEEECCCCCEEEEecchhhhhcCCEEEC
Confidence 99999 67889999999999999999999999999998888877899999999999999999999999999999999999
Q ss_pred hHHHHHHHhcCCCcceEEEEeeeCCCCCeeEEEEEEeCC-CCCCCHHHHHHHHH-hcCCCCCCcceEEEeccccCCCCCc
Q 011116 398 PVELEHLLHSNPEIADAAVIPYPDEEAGQIPMAFVVRKP-GSNITEAEIMDFIA-KQVAPYKKIRRVAFINSIPKSTAGK 475 (493)
Q Consensus 398 ~~~ie~~l~~~~~v~~~~v~~~~~~~~~~~~~~~v~~~~-~~~~~~~~l~~~l~-~~l~~~~~p~~~~~~~~lP~t~~GK 475 (493)
|.+||++|..+|+|.++++++..++..++.+++++++.+ +...+.+++.+++. ++++++++|..|.++++||+|++||
T Consensus 445 p~~iE~~l~~~~~v~~~~v~~~~~~~~g~~~~~~v~~~~~~~~~~~~~~~~~~~~~~l~~~~~P~~i~~v~~iP~t~sGK 524 (547)
T PRK06087 445 SREVEDILLQHPKIHDACVVAMPDERLGERSCAYVVLKAPHHSLTLEEVVAFFSRKRVAKYKYPEHIVVIDKLPRTASGK 524 (547)
T ss_pred HHHHHHHHHhCCCeeEEEEEecCCCCcCceEEEEEEECCCCCCCCHHHHHHHHHhccccccCCCeEEEEeccCCCCCCCc
Confidence 999999999999999999999988888889999999875 44566788888875 5799999999999999999999999
Q ss_pred cchHHHHHHHhhC
Q 011116 476 ILRRELVTHAISG 488 (493)
Q Consensus 476 ~~r~~l~~~~~~~ 488 (493)
++|+.|++++.++
T Consensus 525 ~~r~~l~~~~~~~ 537 (547)
T PRK06087 525 IQKFLLRKDIMRR 537 (547)
T ss_pred CcHHHHHHHHHHH
Confidence 9999999998875
No 50
>PRK07445 O-succinylbenzoic acid--CoA ligase; Reviewed
Probab=100.00 E-value=3.1e-62 Score=489.05 Aligned_cols=417 Identities=20% Similarity=0.301 Sum_probs=347.1
Q ss_pred hHHHHHHhhCCC-CCCCEEEEECCCCCCcHHHHHHHHHHcCCeeccCCCCCCHHHHHHHHhhcCCeEEEEcCCCcccCCC
Q 011116 18 TLSHALSKRDSL-CRKTTSLTSSPLPPSTSPVLYFSLLSLGVVISPANPLSSTSEVSHQIQLSKPSIAFATSHTSYKLPS 96 (493)
Q Consensus 18 ~lA~~L~~~~gl-~~gd~V~l~~~~~~~~~~~~~lA~~~~G~~~v~i~~~~~~~~l~~~l~~~~~~~il~~~~~~~~~~~ 96 (493)
++|.+| .+.|+ ++|++|+++++ |+++++++++||+++|++++|++|.++.+++.++++.+++++++++.+.....
T Consensus 31 ~~a~~L-~~~g~~~~~~~V~i~~~-n~~e~~~~~~A~~~~G~~~vpl~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~-- 106 (452)
T PRK07445 31 QLYLQL-QQLATPRTPPKILLAES-DPLQFLAAFLAAVAAGCPVFLANPHWGQQEWQQVLNLVQPDQIWGLDQLKLSH-- 106 (452)
T ss_pred HHHHHH-HHhcCCCCCCeEEEecC-CCHHHHHHHHHHHHhCcEEEeeccCCCHHHHHHHHHhcCCCEEEecCcccccc--
Confidence 349999 77887 67999999999 99999999999999999999999999999999999999999999876532210
Q ss_pred CCcEEEecCchhhhhhccCcccccccCCCCCCCCCCeEEEEccCCCCCCccceecchHHHHHHHHHhhhhcccCCCCCCC
Q 011116 97 NLRTILMDSPEFISLLNQNEDVADFANSNMTVYQSDPAAILYSSGTTGKVKGVLLSHLNVIAIIAGYYHVTEETDPNEGP 176 (493)
Q Consensus 97 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~TSGTTG~pK~v~~t~~~~~~~~~~~~~~~~~~~~~~~~ 176 (493)
.. ... .......++++++++|||||||.||+|.++|+++..........+..
T Consensus 107 ------~~---------~~~------~~~~~~~~~~~~~i~~TSGTTG~PKgV~~t~~~l~~~~~~~~~~~~~------- 158 (452)
T PRK07445 107 ------PP---------PLP------SQGILPNLETGWIMIPTGGSSGQIRFAIHTWETLTASVQGFQRYFQL------- 158 (452)
T ss_pred ------CC---------CCC------ccccCCCCCCcEEEEeCCCCCCCCcEEEechHHHHHHHHHHHHHhcC-------
Confidence 00 000 00112346899999999999999999999999998877766655532
Q ss_pred CCCcEEEEecChhHHHHHHHHHHHHhcCCeEEEecCCCHHHHHHHHHhcCeeecccChHHHHHHHhcccCCCCCCCCeeE
Q 011116 177 PPHPVSFFTLPMFHVFGFFMLVRAASKGETLVFMERFDFEKMLKAVENYRVTYMPVSPPLIVAFINSKLTDKYDLSSLQL 256 (493)
Q Consensus 177 ~~~~~~~~~~pl~~~~g~~~~~~~l~~G~~~~~~~~~~~~~~~~~l~~~~~t~l~~~P~~~~~l~~~~~~~~~~l~~lr~ 256 (493)
.+ ++.++.+|++|.+|+..++.++..|+++++.+............+++++++.++|+++..+++.. ...++++|.
T Consensus 159 ~~-~~~~~~~Pl~h~~g~~~~~~~l~~G~t~v~~~~~~~~~~~~~~~~~~~t~~~~vP~~l~~l~~~~---~~~l~~l~~ 234 (452)
T PRK07445 159 QQ-VNSFCVLPLYHVSGLMQFMRSFLTGGKLVILPYKRLKSGQELPPNPSDFFLSLVPTQLQRLLQLR---PQWLAQFRT 234 (452)
T ss_pred CC-CceEeccCchhhhhHHHHHHHHHcCCeEEEcChHhccchhhhhhhcCceEEEehHHHHHHHHhhC---hhhhhcceE
Confidence 33 45788999999999988889999999999876322222233445788999999999999988632 334688999
Q ss_pred EEecCCCCCHHHHHHHHHhCCCCceeccccccccCCccccccCCCCCCCCCccccccCCceEEEEcCCCCccCCCCCceE
Q 011116 257 LGCGGAPLGKEVTLKFKEKFPNVEIRQGYGLTETGGAGSRVIGPDEAERHGSVGRLAELMEAKIVDPATGEALPPGQKGE 336 (493)
Q Consensus 257 v~~~Ge~~~~~~~~~~~~~~~~~~v~~~yG~tE~g~~~~~~~~~~~~~~~~~~g~p~~~~~~~i~d~~~~~~~~~g~~Ge 336 (493)
+++||+++++++.+.+.+ + ++++++.||+||++...+............++|+|.++++++|+ .|+.||
T Consensus 235 i~~gG~~l~~~~~~~~~~-~-~~~l~~~YG~TE~~~~~~~~~~~~~~~~~~~~G~~~p~~~v~i~---------~g~~Ge 303 (452)
T PRK07445 235 ILLGGAPAWPSLLEQARQ-L-QLRLAPTYGMTETASQIATLKPDDFLAGNNSSGQVLPHAQITIP---------ANQTGN 303 (452)
T ss_pred EEECCccCCHHHHHHHHh-c-CCeEecCcchhhhcccccccCchhhccCCCcCCccCCCCeEEEc---------CCCcce
Confidence 999999999999998876 4 88999999999998654432111111245678999999999987 356799
Q ss_pred EEEeCccccccccCCcccccccccCCCeeeccceEEEcCCCcEEEEcccCCeEEeCceeeChHHHHHHHhcCCCcceEEE
Q 011116 337 LWLRGPTIMKGYVGDDKATSETVHSEGWLKTGDLCYFDSNGFLFIVDRLKELIKYKAYQVPPVELEHLLHSNPEIADAAV 416 (493)
Q Consensus 337 l~v~~~~~~~gy~~~~~~~~~~~~~~~~~~TgD~~~~~~~g~~~~~GR~~d~i~~~G~~i~~~~ie~~l~~~~~v~~~~v 416 (493)
|+++|+.++.||++++. ..++||+|||++++++||++++.||.||+||.+|++|+|.+||++|.++|+|.+++|
T Consensus 304 l~v~g~~~~~gY~~~~~------~~~g~~~TGDl~~~d~dG~l~~~GR~dd~I~~~G~~V~p~eIE~~l~~~p~V~~a~V 377 (452)
T PRK07445 304 ITIQAQSLALGYYPQIL------DSQGIFETDDLGYLDAQGYLHILGRNSQKIITGGENVYPAEVEAAILATGLVQDVCV 377 (452)
T ss_pred EEEeCCccchhhcCCcc------CCCCEEECCCEEEEcCCCCEEEEeecCCEEEECCEEECHHHHHHHHHhCCCcceEEE
Confidence 99999999999997532 247899999999999999999999999999999999999999999999999999999
Q ss_pred EeeeCCCCCeeEEEEEEeCCCCCCCHHHHHHHHHhcCCCCCCcceEEEeccccCCCCCccchHHHHHHHhhC
Q 011116 417 IPYPDEEAGQIPMAFVVRKPGSNITEAEIMDFIAKQVAPYKKIRRVAFINSIPKSTAGKILRRELVTHAISG 488 (493)
Q Consensus 417 ~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~l~~~l~~~~~p~~~~~~~~lP~t~~GK~~r~~l~~~~~~~ 488 (493)
++.+++..++.++++++..++ ..+.++++++++++|+++++|+.+++++++|+|++||++|+.|++++.++
T Consensus 378 ~g~~~~~~g~~~~a~vv~~~~-~~~~~~l~~~~~~~L~~~~~P~~i~~v~~lP~t~~GKi~r~~L~~~~~~~ 448 (452)
T PRK07445 378 LGLPDPHWGEVVTAIYVPKDP-SISLEELKTAIKDQLSPFKQPKHWIPVPQLPRNPQGKINRQQLQQIAVQR 448 (452)
T ss_pred EeccCcCCCcEEEEEEEeCCC-CCCHHHHHHHHHHhCCcccCCeEEEEecCCCCCCCcccCHHHHHHHHHHh
Confidence 999998888999999988654 45678999999999999999999999999999999999999999988764
No 51
>PRK12583 acyl-CoA synthetase; Provisional
Probab=100.00 E-value=9e-62 Score=502.05 Aligned_cols=461 Identities=29% Similarity=0.438 Sum_probs=387.8
Q ss_pred hHHHHHHhhCCCCCCCEEEEECCCCCCcHHHHHHHHHHcCCeeccCCCCCCHHHHHHHHhhcCCeEEEEcCCCccc----
Q 011116 18 TLSHALSKRDSLCRKTTSLTSSPLPPSTSPVLYFSLLSLGVVISPANPLSSTSEVSHQIQLSKPSIAFATSHTSYK---- 93 (493)
Q Consensus 18 ~lA~~L~~~~gl~~gd~V~l~~~~~~~~~~~~~lA~~~~G~~~v~i~~~~~~~~l~~~l~~~~~~~il~~~~~~~~---- 93 (493)
++|.+| .+.|+++||+|+++++ |+++++++++||+++|++++++++.++.+++.+++++++++++++++.....
T Consensus 57 ~~a~~L-~~~gi~~g~~V~i~~~-~~~~~~~~~~a~~~~G~~~v~l~~~~~~~~~~~~l~~~~~~~ii~~~~~~~~~~~~ 134 (558)
T PRK12583 57 RLARGL-LALGVQPGDRVGIWAP-NCAEWLLTQFATARIGAILVNINPAYRASELEYALGQSGVRWVICADAFKTSDYHA 134 (558)
T ss_pred HHHHHH-HHhCCCCCCEEEEECC-CChHHHHHHHHHHhhCCEEEecCCCCCHHHHHHHHHhcCCcEEEEeccccccchhH
Confidence 459999 7789999999999999 9999999999999999999999999999999999999999999998643210
Q ss_pred ---------------------CCCCCcEEEecC------chhhhhhccCccc--ccccCCCCCCCCCCeEEEEccCCCCC
Q 011116 94 ---------------------LPSNLRTILMDS------PEFISLLNQNEDV--ADFANSNMTVYQSDPAAILYSSGTTG 144 (493)
Q Consensus 94 ---------------------~~~~~~~~~~~~------~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~i~~TSGTTG 144 (493)
++.....+.... ..|.......... ...........++++++++|||||||
T Consensus 135 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~i~~TSGsTG 214 (558)
T PRK12583 135 MLQELLPGLAEGQPGALACERLPELRGVVSLAPAPPPGFLAWHELQARGETVSREALAERQASLDRDDPINIQYTSGTTG 214 (558)
T ss_pred HHHHHhhhhccccccccccccCCcceEEEEecCCCCccccchHhhhhcccccccccccccccccCCCCcEEEEECCCCCC
Confidence 000001111111 1122222111000 00011112345788999999999999
Q ss_pred CccceecchHHHHHHHHHhhhhcccCCCCCCCCCCcEEEEecChhHHHHH-HHHHHHHhcCCeEEEe-cCCCHHHHHHHH
Q 011116 145 KVKGVLLSHLNVIAIIAGYYHVTEETDPNEGPPPHPVSFFTLPMFHVFGF-FMLVRAASKGETLVFM-ERFDFEKMLKAV 222 (493)
Q Consensus 145 ~pK~v~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pl~~~~g~-~~~~~~l~~G~~~~~~-~~~~~~~~~~~l 222 (493)
.||+|.++|.++..++......+ ++.+++++++..|++|.+|. ..++.++..|+++++. ...++..+++.+
T Consensus 215 ~PK~v~~s~~~l~~~~~~~~~~~-------~~~~~d~~~~~~p~~~~~g~~~~~~~~l~~g~~v~~~~~~~~~~~~~~~i 287 (558)
T PRK12583 215 FPKGATLSHHNILNNGYFVAESL-------GLTEHDRLCVPVPLYHCFGMVLANLGCMTVGACLVYPNEAFDPLATLQAV 287 (558)
T ss_pred CCceEEeeHHHHHHHHHHHHHHh-------CCCCCCeEEEecCchhhhhHHHHHHHHHhcCceEEeecCCCCHHHHHHHH
Confidence 99999999999988877766665 34788999999999999998 6678889999998875 457899999999
Q ss_pred HhcCeeecccChHHHHHHHhcccCCCCCCCCeeEEEecCCCCCHHHHHHHHHhCCCCceeccccccccCCccccccCCC-
Q 011116 223 ENYRVTYMPVSPPLIVAFINSKLTDKYDLSSLQLLGCGGAPLGKEVTLKFKEKFPNVEIRQGYGLTETGGAGSRVIGPD- 301 (493)
Q Consensus 223 ~~~~~t~l~~~P~~~~~l~~~~~~~~~~l~~lr~v~~~Ge~~~~~~~~~~~~~~~~~~v~~~yG~tE~g~~~~~~~~~~- 301 (493)
+++++|++.++|+++..++........+++++|.+++||+++++++.+++.+.+++..+++.||+||++.+.+......
T Consensus 288 ~~~~~t~l~~~P~~~~~l~~~~~~~~~~~~~lr~i~~~G~~~~~~~~~~~~~~~~~~~i~~~YG~tE~~~~~~~~~~~~~ 367 (558)
T PRK12583 288 EEERCTALYGVPTMFIAELDHPQRGNFDLSSLRTGIMAGAPCPIEVMRRVMDEMHMAEVQIAYGMTETSPVSLQTTAADD 367 (558)
T ss_pred HHcCCeEEeccHHHHHHHHccccccCCCchhheEEEecCCCCCHHHHHHHHHHcCCcceeccccccccccceeccCcccc
Confidence 9999999999999998888766555566889999999999999999999999986678999999999998765432211
Q ss_pred CCCCCCccccccCCceEEEEcCCCCccCCCCCceEEEEeCccccccccCCcccccccccCCCeeeccceEEEcCCCcEEE
Q 011116 302 EAERHGSVGRLAELMEAKIVDPATGEALPPGQKGELWLRGPTIMKGYVGDDKATSETVHSEGWLKTGDLCYFDSNGFLFI 381 (493)
Q Consensus 302 ~~~~~~~~g~p~~~~~~~i~d~~~~~~~~~g~~Gel~v~~~~~~~gy~~~~~~~~~~~~~~~~~~TgD~~~~~~~g~~~~ 381 (493)
......++|+|.+++.++|+|++ +.+++.|+.|||+++|+.++.||++++..+...++.++||+|||+++++++|.+++
T Consensus 368 ~~~~~~~vG~p~~~~~~~i~d~~-~~~~~~g~~Gel~v~g~~~~~gy~~~~~~~~~~~~~~~~~~TGDl~~~~~dg~l~i 446 (558)
T PRK12583 368 LERRVETVGRTQPHLEVKVVDPD-GATVPRGEIGELCTRGYSVMKGYWNNPEATAESIDEDGWMHTGDLATMDEQGYVRI 446 (558)
T ss_pred cccccCCCCccCCCCeEEEECCC-CCCCCCCCeeEEEEEeCccchhhcCChHHHHhhcCCCCCeeccceEEECCCccEEE
Confidence 12345789999999999999966 89999999999999999999999999998888877789999999999999999999
Q ss_pred EcccCCeEEeCceeeChHHHHHHHhcCCCcceEEEEeeeCCCCCeeEEEEEEeCCCCCCCHHHHHHHHHhcCCCCCCcce
Q 011116 382 VDRLKELIKYKAYQVPPVELEHLLHSNPEIADAAVIPYPDEEAGQIPMAFVVRKPGSNITEAEIMDFIAKQVAPYKKIRR 461 (493)
Q Consensus 382 ~GR~~d~i~~~G~~i~~~~ie~~l~~~~~v~~~~v~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~l~~~l~~~~~p~~ 461 (493)
.||.+|+|+.+|.+|++.+||+.+.++++|.++++++.+++..++.+++++++.++...+..+++++++++|+++++|..
T Consensus 447 ~GR~~~~i~~~G~~v~~~~IE~~l~~~~~v~~~~v~~~~~~~~~~~~~~~v~~~~~~~~~~~~i~~~~~~~L~~~~~P~~ 526 (558)
T PRK12583 447 VGRSKDMIIRGGENIYPREIEEFLFTHPAVADVQVFGVPDEKYGEEIVAWVRLHPGHAASEEELREFCKARIAHFKVPRY 526 (558)
T ss_pred EecccceeEECCEEeCHHHHHHHHHhCCCeeEEEEEeeecCCCCcEEEEEEEECCCCCCCHHHHHHHHHhhcccCcCCcE
Confidence 99999999999999999999999999999999999999988778889999998877667789999999999999999999
Q ss_pred EEEeccccCCCCCccchHHHHHHHhhC
Q 011116 462 VAFINSIPKSTAGKILRRELVTHAISG 488 (493)
Q Consensus 462 ~~~~~~lP~t~~GK~~r~~l~~~~~~~ 488 (493)
+++++++|+|++||++|+.|+++....
T Consensus 527 i~~v~~lP~t~sGK~~r~~L~~~~~~~ 553 (558)
T PRK12583 527 FRFVDEFPMTVTGKVQKFRMREISIEE 553 (558)
T ss_pred EEEeccCCCCCCCCccHHHHHHHHHhh
Confidence 999999999999999999999987653
No 52
>PRK13388 acyl-CoA synthetase; Provisional
Probab=100.00 E-value=7.8e-62 Score=498.77 Aligned_cols=451 Identities=21% Similarity=0.305 Sum_probs=375.2
Q ss_pred HHHHHHhhCCC-CCCCEEEEECCCCCCcHHHHHHHHHHcCCeeccCCCCCCHHHHHHHHhhcCCeEEEEcCCCcccCCC-
Q 011116 19 LSHALSKRDSL-CRKTTSLTSSPLPPSTSPVLYFSLLSLGVVISPANPLSSTSEVSHQIQLSKPSIAFATSHTSYKLPS- 96 (493)
Q Consensus 19 lA~~L~~~~gl-~~gd~V~l~~~~~~~~~~~~~lA~~~~G~~~v~i~~~~~~~~l~~~l~~~~~~~il~~~~~~~~~~~- 96 (493)
+|.+| .+.|+ ++||+|+++++ |+++++++++||+++|++++|++|.++.+++.++++++++++++++++....+.+
T Consensus 39 la~~L-~~~g~~~~~~~V~i~~~-n~~~~v~~~lA~~~~Ga~~v~l~p~~~~~~l~~~l~~~~~~~~i~~~~~~~~~~~~ 116 (540)
T PRK13388 39 RAAAL-IALADPDRPLHVGVLLG-NTPEMLFWLAAAALGGYVLVGLNTTRRGAALAADIRRADCQLLVTDAEHRPLLDGL 116 (540)
T ss_pred HHHHH-HHhcCCCCCCEEEEECC-CCcHHHHHHHHHHhCCCEEEEecccCChHHHHHHHHhcCCCEEEEChhhhHHHHhh
Confidence 59999 78899 89999999999 9999999999999999999999999999999999999999999998765543322
Q ss_pred ---CCcEEEecCchhhhhhccCcccccccCCCCCCCCCCeEEEEccCCCCCCccceecchHHHHHHHHHhhhhcccCCCC
Q 011116 97 ---NLRTILMDSPEFISLLNQNEDVADFANSNMTVYQSDPAAILYSSGTTGKVKGVLLSHLNVIAIIAGYYHVTEETDPN 173 (493)
Q Consensus 97 ---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~TSGTTG~pK~v~~t~~~~~~~~~~~~~~~~~~~~~ 173 (493)
..+++.++...+.+++.... . ........++++++++|||||||.||+|.++|.++..........+.
T Consensus 117 ~~~~~~~i~~~~~~~~~~~~~~~---~-~~~~~~~~~~~~a~i~~TSGTTG~PKgv~~s~~~~~~~~~~~~~~~~----- 187 (540)
T PRK13388 117 DLPGVRVLDVDTPAYAELVAAAG---A-LTPHREVDAMDPFMLIFTSGTTGAPKAVRCSHGRLAFAGRALTERFG----- 187 (540)
T ss_pred cccCceEEEccchhhhhhhcccc---C-cCCCCCCCCCCeEEEEECCCCCCCCCEEEecHHHHHHHHHHHHHHhC-----
Confidence 23455555555555443221 1 11112356799999999999999999999999999887776666663
Q ss_pred CCCCCCcEEEEecChhHHHHHHH-HHHHHhcCCeEEEecCCCHHHHHHHHHhcCeeecccChHHHHHHHhcccCCCCCCC
Q 011116 174 EGPPPHPVSFFTLPMFHVFGFFM-LVRAASKGETLVFMERFDFEKMLKAVENYRVTYMPVSPPLIVAFINSKLTDKYDLS 252 (493)
Q Consensus 174 ~~~~~~~~~~~~~pl~~~~g~~~-~~~~l~~G~~~~~~~~~~~~~~~~~l~~~~~t~l~~~P~~~~~l~~~~~~~~~~l~ 252 (493)
+.++|+++..+|++|..++.. ++.++..|+++++.+.+++..+++.++++++|++..+|..+..++...........
T Consensus 188 --~~~~d~~l~~~p~~~~~~~~~~~~~~l~~G~~~v~~~~~~~~~~~~~i~~~~vt~~~~~p~~l~~l~~~~~~~~~~~~ 265 (540)
T PRK13388 188 --LTRDDVCYVSMPLFHSNAVMAGWAPAVASGAAVALPAKFSASGFLDDVRRYGATYFNYVGKPLAYILATPERPDDADN 265 (540)
T ss_pred --CCCCCEEEEeeCchhhcchHHHHHHHHHcCcEEEECCCCCHHHHHHHHHHhCCeEEEehHHHHHHHHhCCCCcccccc
Confidence 478999999999999998854 55678999999988888899999999999999999999999988876533222234
Q ss_pred CeeEEEecCCCCCHHHHHHHHHhCCCCceeccccccccCCccccccCCCCCCCCCccccccCCceEE-----------EE
Q 011116 253 SLQLLGCGGAPLGKEVTLKFKEKFPNVEIRQGYGLTETGGAGSRVIGPDEAERHGSVGRLAELMEAK-----------IV 321 (493)
Q Consensus 253 ~lr~v~~~Ge~~~~~~~~~~~~~~~~~~v~~~yG~tE~g~~~~~~~~~~~~~~~~~~g~p~~~~~~~-----------i~ 321 (493)
+++.+ + |+.++++..+.+.+.+ ++++++.||+||++.++... .....+++|+|.+++++. ++
T Consensus 266 ~l~~~-~-G~~~~~~~~~~~~~~~-~~~l~~~YG~tE~~~~~~~~----~~~~~~~vG~p~~g~~i~~~~~~~~~~~~~~ 338 (540)
T PRK13388 266 PLRVA-F-GNEASPRDIAEFSRRF-GCQVEDGYGSSEGAVIVVRE----PGTPPGSIGRGAPGVAIYNPETLTECAVARF 338 (540)
T ss_pred ceEEE-E-CCCCCHHHHHHHHHHh-CCceecccccccccceeecC----CCCCCCCCCCCCCCcEEEcCCCCccccceec
Confidence 56643 3 6677888889999888 89999999999998765432 123457899999997653 33
Q ss_pred cCCCCccC-CCCCceEEEEe-CccccccccCCcccccccccCCCeeeccceEEEcCCCcEEEEcccCCeEEeCceeeChH
Q 011116 322 DPATGEAL-PPGQKGELWLR-GPTIMKGYVGDDKATSETVHSEGWLKTGDLCYFDSNGFLFIVDRLKELIKYKAYQVPPV 399 (493)
Q Consensus 322 d~~~~~~~-~~g~~Gel~v~-~~~~~~gy~~~~~~~~~~~~~~~~~~TgD~~~~~~~g~~~~~GR~~d~i~~~G~~i~~~ 399 (493)
| ++++++ +++..|||+++ |+.++.||+++++.+.+.| .+|||+|||+++++++|.+++.||.+|+||++|.+|+|.
T Consensus 339 d-~~g~~~~~~~~~GEl~v~~g~~~~~gY~~~~~~t~~~~-~~g~~~TGD~~~~~~dg~l~i~GR~~d~i~~~G~~v~p~ 416 (540)
T PRK13388 339 D-AHGALLNADEAIGELVNTAGAGFFEGYYNNPEATAERM-RHGMYWSGDLAYRDADGWIYFAGRTADWMRVDGENLSAA 416 (540)
T ss_pred c-CccccccCCCcceEEEEecCCcccccccCChHHHHHHh-hcCceeccceEEEcCCCcEEEeccCCceEEECCEEeCHH
Confidence 3 334444 34678999998 9999999999999988887 478999999999999999999999999999999999999
Q ss_pred HHHHHHhcCCCcceEEEEeeeCCCCCeeEEEEEEeCCCCCCCHHHHHHHHHhc--CCCCCCcceEEEeccccCCCCCccc
Q 011116 400 ELEHLLHSNPEIADAAVIPYPDEEAGQIPMAFVVRKPGSNITEAEIMDFIAKQ--VAPYKKIRRVAFINSIPKSTAGKIL 477 (493)
Q Consensus 400 ~ie~~l~~~~~v~~~~v~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~l~~~--l~~~~~p~~~~~~~~lP~t~~GK~~ 477 (493)
+||++|.++|+|.+|+|++.+++..++.+++++++.++...+.+++.++++.+ |+++++|..++++++||+|++||++
T Consensus 417 eIE~~l~~~~~V~~~~v~g~~~~~~g~~~~~~v~~~~~~~~~~~~l~~~l~~~~~l~~~~~P~~~~~v~~iP~t~~GKv~ 496 (540)
T PRK13388 417 PIERILLRHPAINRVAVYAVPDERVGDQVMAALVLRDGATFDPDAFAAFLAAQPDLGTKAWPRYVRIAADLPSTATNKVL 496 (540)
T ss_pred HHHHHHHhCCCceEEEEEEccCCCCCceeEEEEEECCCCcCCHHHHHHHHHhhccCCcccCCcEEEEeccCCCCCcceee
Confidence 99999999999999999999988788888888888877777888999999764 9999999999999999999999999
Q ss_pred hHHHHHHHhhCCCC
Q 011116 478 RRELVTHAISGNLS 491 (493)
Q Consensus 478 r~~l~~~~~~~~~~ 491 (493)
|+.|+++..+...+
T Consensus 497 R~~L~~~~~~~~~~ 510 (540)
T PRK13388 497 KRELIAQGWATGDP 510 (540)
T ss_pred HHhHHHhccCCCCC
Confidence 99999988766544
No 53
>TIGR02275 DHB_AMP_lig 2,3-dihydroxybenzoate-AMP ligase. Proteins in this family belong to the AMP-binding enzyme family (pfam00501). Members activate 2,3-dihydroxybenzoate (DHB) by ligation of AMP from ATP with the release of pyrophosphate; many are involved in synthesis of siderophores such as enterobactin, vibriobactin, vulnibactin, etc. The most closely related proteine believed to differ in function activates salicylate rather than DHB.
Probab=100.00 E-value=1.1e-61 Score=497.20 Aligned_cols=448 Identities=25% Similarity=0.383 Sum_probs=380.1
Q ss_pred hHHHHHHhhCCCCCCCEEEEECCCCCCcHHHHHHHHHHcCCeeccCCCCCCHHHHHHHHhhcCCeEEEEcCCCccc----
Q 011116 18 TLSHALSKRDSLCRKTTSLTSSPLPPSTSPVLYFSLLSLGVVISPANPLSSTSEVSHQIQLSKPSIAFATSHTSYK---- 93 (493)
Q Consensus 18 ~lA~~L~~~~gl~~gd~V~l~~~~~~~~~~~~~lA~~~~G~~~v~i~~~~~~~~l~~~l~~~~~~~il~~~~~~~~---- 93 (493)
++|.+| .+.|+++||+|+++++ |+++++++++||+++|++++++++..+.+++.++++.++++.++++......
T Consensus 60 ~~a~~L-~~~g~~~g~~V~i~~~-~~~~~~~~~la~~~~G~~~v~~~~~~~~~~~~~~l~~~~~~~li~~~~~~~~~~~~ 137 (527)
T TIGR02275 60 NLAAGL-TKLGIGQGDTAVVQLP-NIAEFYIVFFALLKLGIAPVLALFSHRKSELTAYAQQIEPALYIIDRAHSLFDYDA 137 (527)
T ss_pred HHHHHH-HHcCCCCCCEEEEECC-CcHHHHHHHHHHHHcCeEEeccccccCHHHHHHHHHhcCCcEEEEcCcccccchHH
Confidence 459999 7789999999999999 9999999999999999999999999999999999999999999998653211
Q ss_pred ----CC---CCCcEEEecC-----chhhhhhccCcccccccCCCCCCCCCCeEEEEccCCCCCCccceecchHHHHHHHH
Q 011116 94 ----LP---SNLRTILMDS-----PEFISLLNQNEDVADFANSNMTVYQSDPAAILYSSGTTGKVKGVLLSHLNVIAIIA 161 (493)
Q Consensus 94 ----~~---~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~TSGTTG~pK~v~~t~~~~~~~~~ 161 (493)
+. .....+.+.. ......+.... . ........++++++++|||||||.||+|.++|.++...+.
T Consensus 138 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~-~~~~~~~~~~~~a~i~~TSGTTG~PKgv~~s~~~~~~~~~ 213 (527)
T TIGR02275 138 FARQLQSKLPTLRNIIVAGQTRVEAELFLWLESPA---E-PVKFPPTKSDEVAFFQLSGGSTGTPKLIPRTHNDYYYSVR 213 (527)
T ss_pred HHHHHHhhCCcceEEEEecCCCCcchhhHHhhCcC---c-cccCCCCCCCccEEEEeCCCCCCCCceeeeehHHHHHHHH
Confidence 10 1112222211 01111111111 1 1112245678999999999999999999999999998887
Q ss_pred HhhhhcccCCCCCCCCCCcEEEEecChhHHHHHH--HHHHHHhcCCeEEEecCCCHHHHHHHHHhcCeeecccChHHHHH
Q 011116 162 GYYHVTEETDPNEGPPPHPVSFFTLPMFHVFGFF--MLVRAASKGETLVFMERFDFEKMLKAVENYRVTYMPVSPPLIVA 239 (493)
Q Consensus 162 ~~~~~~~~~~~~~~~~~~~~~~~~~pl~~~~g~~--~~~~~l~~G~~~~~~~~~~~~~~~~~l~~~~~t~l~~~P~~~~~ 239 (493)
.....+. +.++++++..+|++|.+++. .++.++..|+++++.+..++..+++.++++++|++.++|+++..
T Consensus 214 ~~~~~~~-------~~~~d~~l~~~P~~h~~~~~~~~~~~~l~~G~~~v~~~~~~~~~~~~~i~~~~~t~~~~~p~~~~~ 286 (527)
T TIGR02275 214 RSVEICW-------LTQQTRYLCALPAAHNYPLSSPGALGVFYAGGCVVLAPDPSPTDCFPLIERHKVTVTALVPPAVAL 286 (527)
T ss_pred HHHhhcC-------CCcCCEEEECCChHhhhhhhHHHHHHHHhcCCeEEECCCCCHHHHHHHHHHhCCeEEEecHHHHHH
Confidence 7666553 47899999999999999984 47889999999999888889999999999999999999999999
Q ss_pred HHhcccCCCCCCCCeeEEEecCCCCCHHHHHHHHHhCCCCceeccccccccCCccccccCCCCCCCCCcccccc-CCceE
Q 011116 240 FINSKLTDKYDLSSLQLLGCGGAPLGKEVTLKFKEKFPNVEIRQGYGLTETGGAGSRVIGPDEAERHGSVGRLA-ELMEA 318 (493)
Q Consensus 240 l~~~~~~~~~~l~~lr~v~~~Ge~~~~~~~~~~~~~~~~~~v~~~yG~tE~g~~~~~~~~~~~~~~~~~~g~p~-~~~~~ 318 (493)
+++........++++|.+++||+++++++.+++.+.+ ++++++.||+||++..... ..........++|+|. ++..+
T Consensus 287 l~~~~~~~~~~~~~lr~~~~gG~~l~~~~~~~~~~~~-g~~~~~~YG~tE~~~~~~~-~~~~~~~~~~~~G~~~~~~~~v 364 (527)
T TIGR02275 287 WMQAASKSRYDLSSLKLLQVGGAKFSEAAARRVPAVF-GCQLQQVFGMAEGLVNYTR-LDDPAEIIFTTQGRPMSPDDEV 364 (527)
T ss_pred HHhCccccCCCccceEEEEEcCCCCCHHHHHHHHHHh-CCeEEeeeccCccCccccC-CCCccccccccCCCCCCCCceE
Confidence 9887766666788999999999999999999999998 8999999999996543322 1111222446789999 48899
Q ss_pred EEEcCCCCccCCCCCceEEEEeCccccccccCCcccccccccCCCeeeccceEEEcCCCcEEEEcccCCeEEeCceeeCh
Q 011116 319 KIVDPATGEALPPGQKGELWLRGPTIMKGYVGDDKATSETVHSEGWLKTGDLCYFDSNGFLFIVDRLKELIKYKAYQVPP 398 (493)
Q Consensus 319 ~i~d~~~~~~~~~g~~Gel~v~~~~~~~gy~~~~~~~~~~~~~~~~~~TgD~~~~~~~g~~~~~GR~~d~i~~~G~~i~~ 398 (493)
+++| +++++++.|+.|||+++|+.++.||+++++.+...++.+|||+|||+++++++|++++.||.+|+|+.+|.+|+|
T Consensus 365 ~i~d-~~g~~~~~g~~Gei~v~g~~~~~gY~~~~~~~~~~~~~dg~~~TGDl~~~~~~g~l~~~gR~~d~i~~~G~~v~~ 443 (527)
T TIGR02275 365 RVVD-DHGNPVAPGETGMLLTRGPYTFRGYYKAPEHNAAAFDAEGFYYTGDLVRLTPEGYIVVVGRAKDQINRGGEKIAA 443 (527)
T ss_pred EEEC-CCCCCCCCCCceEEEecCCccchhhcCChhHhHhhcCcCCCEEcCceEEEcCCccEEEEecccceeecCCEEECH
Confidence 9999 678899999999999999999999999999999889889999999999999999999999999999999999999
Q ss_pred HHHHHHHhcCCCcceEEEEeeeCCCCCeeEEEEEEeCCCCCCCHHHHHHHHHhc-CCCCCCcceEEEeccccCCCCCccc
Q 011116 399 VELEHLLHSNPEIADAAVIPYPDEEAGQIPMAFVVRKPGSNITEAEIMDFIAKQ-VAPYKKIRRVAFINSIPKSTAGKIL 477 (493)
Q Consensus 399 ~~ie~~l~~~~~v~~~~v~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~l~~~-l~~~~~p~~~~~~~~lP~t~~GK~~ 477 (493)
.+||++|.++|+|.+++|++.+++..++.+++++++.+. ..+..+++++++++ ++.+++|..+.+++++|+|++||++
T Consensus 444 ~eiE~~l~~~~~v~~~~v~~~~~~~~~~~~~a~vv~~~~-~~~~~~l~~~l~~~~l~~~~~P~~i~~v~~iP~t~sGKv~ 522 (527)
T TIGR02275 444 EEIENLLLAHPAVHDAALVSMPDELLGEKSCAFIVVRDP-ALKAAQLRRFLRERGLAEYKLPDRVEFIDSLPLTAVGKID 522 (527)
T ss_pred HHHHHHHHhCCCceEEEEEecCCcccccEEEEEEEECCC-CCCHHHHHHHHHhCCCccccCCCEEEEeccCCCCCcccee
Confidence 999999999999999999999998888888999988654 46788999999975 9999999999999999999999999
Q ss_pred hHHHH
Q 011116 478 RRELV 482 (493)
Q Consensus 478 r~~l~ 482 (493)
|+.||
T Consensus 523 r~~L~ 527 (527)
T TIGR02275 523 KKALR 527 (527)
T ss_pred HHhcC
Confidence 99874
No 54
>PRK08043 bifunctional acyl-[acyl carrier protein] synthetase/2-acylglycerophosphoethanolamine acyltransferase; Validated
Probab=100.00 E-value=4.8e-62 Score=515.47 Aligned_cols=453 Identities=21% Similarity=0.309 Sum_probs=366.1
Q ss_pred chhhhHHHHHHhhCCCCCCCEEEEECCCCCCcHHHHHHHHHHcCCeeccCCCCCCHHHHHHHHhhcCCeEEEEcCCCccc
Q 011116 14 SARFTLSHALSKRDSLCRKTTSLTSSPLPPSTSPVLYFSLLSLGVVISPANPLSSTSEVSHQIQLSKPSIAFATSHTSYK 93 (493)
Q Consensus 14 ~~~~~lA~~L~~~~gl~~gd~V~l~~~~~~~~~~~~~lA~~~~G~~~v~i~~~~~~~~l~~~l~~~~~~~il~~~~~~~~ 93 (493)
++++ |++| .+. +++||+|+++++ |++++++++|||+++|++++|+++.++.+++.++++++++++++++.+..+.
T Consensus 241 ~~~l--A~~L-~~~-~~~gd~Val~~~-n~~e~~~~~lA~~~~G~v~vpl~~~~~~~~l~~~l~~s~~~~vi~~~~~~~~ 315 (718)
T PRK08043 241 TLFV--GRIL-EKY-SVEGERIGLMLP-NATISAAVIFGASLRRRIPAMMNYTAGVKGLTSAITAAEIKTIFTSRQFLDK 315 (718)
T ss_pred HHHH--HHHH-HHh-cCCCceEEEEcC-CcHHHHHHHHHHHHcCCcccccccCcCHHHHHHHHHHcCCcEEEEcHHHHhh
Confidence 4444 9999 555 599999999999 9999999999999999999999999999999999999999999998764332
Q ss_pred -----CCC---CCcEEEecCc-h---hhhhhccCcccccccCCCCCCCCCCeEEEEccCCCCCCccceecchHHHHHHHH
Q 011116 94 -----LPS---NLRTILMDSP-E---FISLLNQNEDVADFANSNMTVYQSDPAAILYSSGTTGKVKGVLLSHLNVIAIIA 161 (493)
Q Consensus 94 -----~~~---~~~~~~~~~~-~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~TSGTTG~pK~v~~t~~~~~~~~~ 161 (493)
+.. ....+.+++. . +.....................++++++++|||||||.||+|.++|.++.....
T Consensus 316 ~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~a~i~~TSGTTG~PKgv~~sh~~l~~~~~ 395 (718)
T PRK08043 316 GKLWHLPEQLTQVRWVYLEDLKDDVTTADKLWIFAHLLMPRLAQVKQQPEDAALILFTSGSEGHPKGVVHSHKSLLANVE 395 (718)
T ss_pred ccCCChhhhhccccEEEhhhhhhhcchhHHHHHHHHHhCCccccCCCCCCCeEEEEECCCCCCCCCEEEEcHHHHHHHHH
Confidence 111 1122322211 0 000000000000001111234678999999999999999999999999988877
Q ss_pred HhhhhcccCCCCCCCCCCcEEEEecChhHHHHH-HHHHHHHhcCCeEEEecC-CCHHHHHHHHHhcCeeecccChHHHHH
Q 011116 162 GYYHVTEETDPNEGPPPHPVSFFTLPMFHVFGF-FMLVRAASKGETLVFMER-FDFEKMLKAVENYRVTYMPVSPPLIVA 239 (493)
Q Consensus 162 ~~~~~~~~~~~~~~~~~~~~~~~~~pl~~~~g~-~~~~~~l~~G~~~~~~~~-~~~~~~~~~l~~~~~t~l~~~P~~~~~ 239 (493)
.....+ ++.++|++++.+|++|.+++ ..++.++..|+++++.+. .+...+++.++++++|++.++|+++..
T Consensus 396 ~~~~~~-------~~~~~d~~l~~~Pl~h~~g~~~~~~~~l~~G~~vv~~~~~~~~~~~~~~i~~~~vt~~~~~p~~~~~ 468 (718)
T PRK08043 396 QIKTIA-------DFTPNDRFMSALPLFHSFGLTVGLFTPLLTGAEVFLYPSPLHYRIVPELVYDRNCTVLFGTSTFLGN 468 (718)
T ss_pred HHHHhh-------CCCccCeEEEcCcchhhhhhHHHHHHHHHcCCEEEEeCCcccHHHHHHHHHhcCCeEEEchHHHHHH
Confidence 666555 34789999999999999998 568889999999998764 567788999999999999999999988
Q ss_pred HHhcccCCCCCCCCeeEEEecCCCCCHHHHHHHHHhCCCCceeccccccccCCccccccCCCCCCCCCccccccCCceEE
Q 011116 240 FINSKLTDKYDLSSLQLLGCGGAPLGKEVTLKFKEKFPNVEIRQGYGLTETGGAGSRVIGPDEAERHGSVGRLAELMEAK 319 (493)
Q Consensus 240 l~~~~~~~~~~l~~lr~v~~~Ge~~~~~~~~~~~~~~~~~~v~~~yG~tE~g~~~~~~~~~~~~~~~~~~g~p~~~~~~~ 319 (493)
+.+.. ...+++++|.+++||+++++++.+.+++.| ++++++.||+||++...+... +.....+++|+|.++++++
T Consensus 469 l~~~~--~~~~~~~lr~i~~gg~~l~~~~~~~~~~~~-g~~l~~~YG~TE~~~~~~~~~--~~~~~~~svG~p~pg~~~~ 543 (718)
T PRK08043 469 YARFA--NPYDFARLRYVVAGAEKLQESTKQLWQDKF-GLRILEGYGVTECAPVVSINV--PMAAKPGTVGRILPGMDAR 543 (718)
T ss_pred hhhhc--CcccccceEEEEEeCccCCHHHHHHHHHHc-CCCeecccCcccccceEEecC--CcccCCCCCCCcCCCCeeE
Confidence 76642 234578999999999999999999999998 899999999999987654322 2234568999999999999
Q ss_pred EEcCCCCccCCCCCceEEEEeCccccccccCC--ccc-------ccccccCCCeeeccceEEEcCCCcEEEEcccCCeEE
Q 011116 320 IVDPATGEALPPGQKGELWLRGPTIMKGYVGD--DKA-------TSETVHSEGWLKTGDLCYFDSNGFLFIVDRLKELIK 390 (493)
Q Consensus 320 i~d~~~~~~~~~g~~Gel~v~~~~~~~gy~~~--~~~-------~~~~~~~~~~~~TgD~~~~~~~g~~~~~GR~~d~i~ 390 (493)
++|.+ +. ++.|||+++|+.++.||+++ ++. +.+.+..+|||+|||++++|+||++++.||.+|+||
T Consensus 544 i~d~~-~~----~~~Gel~v~g~~v~~GY~~~e~~~~~~~~~~~~~~~~~~~gw~~TGDlg~~d~dG~l~i~GR~~d~I~ 618 (718)
T PRK08043 544 LLSVP-GI----EQGGRLQLKGPNIMNGYLRVEKPGVLEVPTAENARGEMERGWYDTGDIVRFDEQGFVQIQGRAKRFAK 618 (718)
T ss_pred EecCC-CC----CCceEEEEecCCccccccCCCCcccccccccccccccccCCeEecCCEEEEcCCCcEEEEecCCCeeE
Confidence 99843 32 45699999999999999983 332 222233479999999999999999999999999999
Q ss_pred eCceeeChHHHHHHHhcCCCcceEEEEeeeCCCCCeeEEEEEEeCCCCCCCHHHHHHHHHhc-CCCCCCcceEEEecccc
Q 011116 391 YKAYQVPPVELEHLLHSNPEIADAAVIPYPDEEAGQIPMAFVVRKPGSNITEAEIMDFIAKQ-VAPYKKIRRVAFINSIP 469 (493)
Q Consensus 391 ~~G~~i~~~~ie~~l~~~~~v~~~~v~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~l~~~-l~~~~~p~~~~~~~~lP 469 (493)
++|++|+|.+||+++.+++.+.++++++.+++..++.++++++ +...+.++++++++++ ++.|++|..+.+++++|
T Consensus 619 ~~G~~V~p~eIE~~l~~~~~~~~~avv~~~~~~~ge~~v~~~~---~~~~~~~~l~~~~~~~~l~~~~vP~~i~~v~~lP 695 (718)
T PRK08043 619 IAGEMVSLEMVEQLALGVSPDKQHATAIKSDASKGEALVLFTT---DSELTREKLQQYAREHGVPELAVPRDIRYLKQLP 695 (718)
T ss_pred eCcEEcCHHHHHHHHHhCCccceEEEEEccCCCCCceEEEEEc---CcccCHHHHHHHHHhcCCCcccCCceEEEecccC
Confidence 9999999999999999999888999998888888888777764 3346778899999887 99999999999999999
Q ss_pred CCCCCccchHHHHHHHhhCCCC
Q 011116 470 KSTAGKILRRELVTHAISGNLS 491 (493)
Q Consensus 470 ~t~~GK~~r~~l~~~~~~~~~~ 491 (493)
+|++||++|+.|++++.+.+.+
T Consensus 696 ~t~~GKi~r~~L~~~~~~~~~~ 717 (718)
T PRK08043 696 LLGSGKPDFVTLKSMVDEPEQH 717 (718)
T ss_pred cCCCCCcCHHHHHHHHhccccC
Confidence 9999999999999999887654
No 55
>PRK05857 acyl-CoA synthetase; Validated
Probab=100.00 E-value=7.5e-62 Score=499.18 Aligned_cols=462 Identities=22% Similarity=0.327 Sum_probs=367.3
Q ss_pred hHHHHHHhhCCCCCCCEEEEECCCCCCcHHHHHHHHHHcCCeeccCCCCCCHHHHHHHHhhcCCeEEEEcCCCccc---C
Q 011116 18 TLSHALSKRDSLCRKTTSLTSSPLPPSTSPVLYFSLLSLGVVISPANPLSSTSEVSHQIQLSKPSIAFATSHTSYK---L 94 (493)
Q Consensus 18 ~lA~~L~~~~gl~~gd~V~l~~~~~~~~~~~~~lA~~~~G~~~v~i~~~~~~~~l~~~l~~~~~~~il~~~~~~~~---~ 94 (493)
++|+.| .+.|+++||+|+++++ |+++++++++||+++|++++|+++.++.+++.++++.++++.+++++..... +
T Consensus 53 ~~a~~L-~~~g~~~g~~V~i~~~-~~~e~~~~~lA~~~~G~v~v~l~~~~~~~~l~~~~~~~~~~~ii~~~~~~~~~~~~ 130 (540)
T PRK05857 53 GLAADL-RAQSVSRGSRVLVISD-NGPETYLSVLACAKLGAIAVMADGNLPIAAIERFCQITDPAAALVAPGSKMASSAV 130 (540)
T ss_pred HHHHHH-HHhCcCCCCEEEEEcC-CCHHHHHHHHHHHHcCeEEEecCccCCHHHHHHHHHhcCCceEEEeccchhccccc
Confidence 359999 7789999999999999 9999999999999999999999999999999999999999999999764321 2
Q ss_pred CC---CCcEEEecCchhhhhhccCcccccccCCCCCCCCCCeEEEEccCCCCCCccceecchHHHHHHHHHhhhhcccCC
Q 011116 95 PS---NLRTILMDSPEFISLLNQNEDVADFANSNMTVYQSDPAAILYSSGTTGKVKGVLLSHLNVIAIIAGYYHVTEETD 171 (493)
Q Consensus 95 ~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~TSGTTG~pK~v~~t~~~~~~~~~~~~~~~~~~~ 171 (493)
.+ ....+.++.............. ...........+++++++|||||||.||+|.++|.++.++........ .
T Consensus 131 ~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~a~i~~TSGTTG~PKgV~~sh~~~~~~~~~~~~~~-~-- 206 (540)
T PRK05857 131 PEALHSIPVIAVDIAAVTRESEHSLDA-ASLAGNADQGSEDPLAMIFTSGTTGEPKAVLLANRTFFAVPDILQKEG-L-- 206 (540)
T ss_pred cccccccceeEeecccccccccccccc-cccccccCCCCCCeEEEEeCCCCCCCCCeEEEechhhhhhhHHhhhcc-c--
Confidence 11 2223333321111000000000 001112344678999999999999999999999999977654322110 0
Q ss_pred CCCCCCCCcEEEEecChhHHHHHHHHHHHHhcCCeEEEecCCCHHHHHHHHHhcCeeecccChHHHHHHHhcccCCCCCC
Q 011116 172 PNEGPPPHPVSFFTLPMFHVFGFFMLVRAASKGETLVFMERFDFEKMLKAVENYRVTYMPVSPPLIVAFINSKLTDKYDL 251 (493)
Q Consensus 172 ~~~~~~~~~~~~~~~pl~~~~g~~~~~~~l~~G~~~~~~~~~~~~~~~~~l~~~~~t~l~~~P~~~~~l~~~~~~~~~~l 251 (493)
....+..+++.+..+|++|..++...+.+++.|+++++ ...++..+++.++++++|++.++|+++..|++........+
T Consensus 207 ~~~~~~~~~~~~~~~p~~h~~~l~~~~~~l~~G~~~v~-~~~~~~~~~~~i~~~~it~~~~~P~~~~~l~~~~~~~~~~~ 285 (540)
T PRK05857 207 NWVTWVVGETTYSPLPATHIGGLWWILTCLMHGGLCVT-GGENTTSLLEILTTNAVATTCLVPTLLSKLVSELKSANATV 285 (540)
T ss_pred cccccccCceeeecCCccccchHHHHHHHhhcceeEEe-cCCChhHHHHHHHhcCcceEEeChHHHHHHHhccccCCCcC
Confidence 00123567899999999999999888889999998775 44578999999999999999999999999988776666678
Q ss_pred CCeeEEEecCCCCCHHHHHHHHHhCCCCceeccccccccCCccccccCCCC---CCCCCccccccCCceEEEEcCCCCcc
Q 011116 252 SSLQLLGCGGAPLGKEVTLKFKEKFPNVEIRQGYGLTETGGAGSRVIGPDE---AERHGSVGRLAELMEAKIVDPATGEA 328 (493)
Q Consensus 252 ~~lr~v~~~Ge~~~~~~~~~~~~~~~~~~v~~~yG~tE~g~~~~~~~~~~~---~~~~~~~g~p~~~~~~~i~d~~~~~~ 328 (493)
+++|.+++||++++....+++ +.+ ++++++.||+||++........... ....+++|+|.++++++|+|++...+
T Consensus 286 ~~lr~~~~gG~~~~~~~~~~~-~~~-g~~i~~~YG~TE~~~~~~~~~~~~~~~~~~~~~~~G~~~~g~~v~i~d~~~~~~ 363 (540)
T PRK05857 286 PSLRLVGYGGSRAIAADVRFI-EAT-GVRTAQVYGLSETGCTALCLPTDDGSIVKIEAGAVGRPYPGVDVYLAATDGIGP 363 (540)
T ss_pred ccceEEEEcCccCCchhHHHH-HHh-CCeeecccCCCcCCceeeecccccccccccccCCcCcccCCcEEEEECccccCc
Confidence 899999999999998777644 466 8999999999999864433211111 12457899999999999999554433
Q ss_pred C-----CCCCceEEEEeCccccccccCCcccccccccCCCeeeccceEEEcCCCcEEEEcccCCeEEeCceeeChHHHHH
Q 011116 329 L-----PPGQKGELWLRGPTIMKGYVGDDKATSETVHSEGWLKTGDLCYFDSNGFLFIVDRLKELIKYKAYQVPPVELEH 403 (493)
Q Consensus 329 ~-----~~g~~Gel~v~~~~~~~gy~~~~~~~~~~~~~~~~~~TgD~~~~~~~g~~~~~GR~~d~i~~~G~~i~~~~ie~ 403 (493)
+ +.|+.|||+++|+.++.||+++++.+.+.| .+|||+|||+++++++|++++.||.+|+||.+|.+|+|.+||.
T Consensus 364 ~~~~~~~~~~~Gel~v~g~~~~~GY~~~~~~t~~~~-~~g~~~TGDlg~~d~~g~l~~~GR~~~~ik~~G~~v~p~eIE~ 442 (540)
T PRK05857 364 TAPGAGPSASFGTLWIKSPANMLGYWNNPERTAEVL-IDGWVNTGDLLERREDGFFYIKGRSSEMIICGGVNIAPDEVDR 442 (540)
T ss_pred cccccCCCCCcceEEEeCcchhhhhhCCccchhhhc-CCCceeccceEEEcCCceEEEeccccccEecCCEEECHHHHHH
Confidence 3 457899999999999999999999998888 4799999999999999999999999999999999999999999
Q ss_pred HHhcCCCcceEEEEeeeCCCCCeeEEEEEEeCCCCCCC-H----HHHHHHHHhcCCCCCCcceEEEeccccCCCCCccch
Q 011116 404 LLHSNPEIADAAVIPYPDEEAGQIPMAFVVRKPGSNIT-E----AEIMDFIAKQVAPYKKIRRVAFINSIPKSTAGKILR 478 (493)
Q Consensus 404 ~l~~~~~v~~~~v~~~~~~~~~~~~~~~v~~~~~~~~~-~----~~l~~~l~~~l~~~~~p~~~~~~~~lP~t~~GK~~r 478 (493)
+|..+|+|.+++|++.++...++.+.++++..+..... . +.+.++++++++++++|..+.+++++|+|++||++|
T Consensus 443 ~l~~~~~V~~~~v~~~~~~~~~~~~~~~vv~~~~~~~~~~~~l~~~~~~~~~~~l~~~~~P~~v~~~~~iP~t~~GKi~r 522 (540)
T PRK05857 443 IAEGVSGVREAACYEIPDEEFGALVGLAVVASAELDESAARALKHTIAARFRRESEPMARPSTIVIVTDIPRTQSGKVMR 522 (540)
T ss_pred HHHhCCCeeEEEEEecCccccccceEEEEEeCCCCChhhHHHHHHHHHHHHHhhhccccCCeEEEEhhcCCCCCCcceeH
Confidence 99999999999999998887778888888775442211 2 234455667799999999999999999999999999
Q ss_pred HHHHHHHhhCC
Q 011116 479 RELVTHAISGN 489 (493)
Q Consensus 479 ~~l~~~~~~~~ 489 (493)
+.|++.+...+
T Consensus 523 ~~l~~~~~~~~ 533 (540)
T PRK05857 523 ASLAAAATADK 533 (540)
T ss_pred HHHHHhhhhcc
Confidence 99999987654
No 56
>PLN03051 acyl-activating enzyme; Provisional
Probab=100.00 E-value=9.4e-62 Score=493.34 Aligned_cols=441 Identities=17% Similarity=0.230 Sum_probs=344.6
Q ss_pred CCCCCCcHHHHHHHHHHcCCeeccCCCCCCHHHHHHHHhhcCCeEEEEcCCCc------ccCC---C--CCcEEEec---
Q 011116 39 SPLPPSTSPVLYFSLLSLGVVISPANPLSSTSEVSHQIQLSKPSIAFATSHTS------YKLP---S--NLRTILMD--- 104 (493)
Q Consensus 39 ~~~~~~~~~~~~lA~~~~G~~~v~i~~~~~~~~l~~~l~~~~~~~il~~~~~~------~~~~---~--~~~~~~~~--- 104 (493)
++ |+++++++++||+++|++++|+++.++.+++.++++.++++++|+++... ..+. . ....+.+.
T Consensus 1 ~~-n~~e~~~~~lA~~~~Gav~vpl~~~~~~~el~~~l~~~~~~~li~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~ 79 (499)
T PLN03051 1 MP-MTVDAVIIYLAIVLAGCVVVSVADSFSAKEIATRLDISGAKGVFTQDVVLRGGRALPLYSKVVEAAPAKAIVLPAAG 79 (499)
T ss_pred CC-CcHHHHHHHHHHHHcCCEEEeeCCCCCHHHHHHHHHhcCceEEEecCceeeCCeeecchhhhhhcccceEEEEeccC
Confidence 47 99999999999999999999999999999999999999999999986431 1111 0 11222221
Q ss_pred ----------CchhhhhhccCccc---ccccCCCCCCCCCCeEEEEccCCCCCCccceecchHHHHHHHHHhhhhcccCC
Q 011116 105 ----------SPEFISLLNQNEDV---ADFANSNMTVYQSDPAAILYSSGTTGKVKGVLLSHLNVIAIIAGYYHVTEETD 171 (493)
Q Consensus 105 ----------~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~i~~TSGTTG~pK~v~~t~~~~~~~~~~~~~~~~~~~ 171 (493)
...|.+++...... ...........++++++|+|||||||.||+|.++|.++..........+
T Consensus 80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~a~i~yTSGTTG~PKgV~~sh~~~~~~~~~~~~~~---- 155 (499)
T PLN03051 80 EPVAVPLREQDLSWCDFLGVAAAQGSVGGNEYSPVYAPVESVTNILFSSGTTGEPKAIPWTHLSPLRCASDGWAHM---- 155 (499)
T ss_pred cccCCccccCcccHHHHHhhhccccccccccCCcccCCccceEEEEeCCCCCCCCceEEEccchHHHHHHHHHHhc----
Confidence 01233333111000 0001111123568999999999999999999999999877655444443
Q ss_pred CCCCCCCCcEEEEecChhHHHHHHHHHHHHhcCCeEEEec-CCCHHHHHHHHHhcCeeecccChHHHHHHHhccc--CCC
Q 011116 172 PNEGPPPHPVSFFTLPMFHVFGFFMLVRAASKGETLVFME-RFDFEKMLKAVENYRVTYMPVSPPLIVAFINSKL--TDK 248 (493)
Q Consensus 172 ~~~~~~~~~~~~~~~pl~~~~g~~~~~~~l~~G~~~~~~~-~~~~~~~~~~l~~~~~t~l~~~P~~~~~l~~~~~--~~~ 248 (493)
++.++|++++.+|++|..++..++.++..|+++++.+ .+++..+++.++++++|++.++|+++..|++... ...
T Consensus 156 ---~~~~~d~~l~~~pl~h~~g~~~~~~~l~~G~t~v~~~~~~~~~~~~~~i~~~~vt~~~~vP~~~~~l~~~~~~~~~~ 232 (499)
T PLN03051 156 ---DIQPGDVVCWPTNLGWMMGPWLLYSAFLNGATLALYGGAPLGRGFGKFVQDAGVTVLGLVPSIVKAWRHTGAFAMEG 232 (499)
T ss_pred ---CCCCCCEEEEccCcceeeehHHHHHHHHcCCEEEecCCCCCcHHHHHHHHHhCCcEEEeCHHHHHHHHhcCcccccc
Confidence 3478899999999999999877888999999999886 4678999999999999999999999999887543 234
Q ss_pred CCCCCeeEEEecCCCCCHHHHHHHHHhCC-CCceeccccccccCCccccccCCCCCCCCCccccccCCceEEEEcCCCCc
Q 011116 249 YDLSSLQLLGCGGAPLGKEVTLKFKEKFP-NVEIRQGYGLTETGGAGSRVIGPDEAERHGSVGRLAELMEAKIVDPATGE 327 (493)
Q Consensus 249 ~~l~~lr~v~~~Ge~~~~~~~~~~~~~~~-~~~v~~~yG~tE~g~~~~~~~~~~~~~~~~~~g~p~~~~~~~i~d~~~~~ 327 (493)
.+++++|.+++||+++++++.+++++.++ ++.+++.||+||++...... ........+++|+|.++++++|+| ++++
T Consensus 233 ~~~~~Lr~i~~gG~~~~~~~~~~~~~~~~~~~~~~~~YG~TE~~~~~~~~-~~~~~~~~~~~G~p~~~~~~~ivd-~~g~ 310 (499)
T PLN03051 233 LDWSKLRVFASTGEASAVDDVLWLSSVRGYYKPVIEYCGGTELASGYISS-TLLQPQAPGAFSTASLGTRFVLLN-DNGV 310 (499)
T ss_pred CCchhheEEEecCCCCCHHHHHHHHHhccccceeEeeeccccccceeecc-cccCCCCCccccCCCCCceEEEEC-CCCC
Confidence 56789999999999999999988877431 47899999999986533321 111223456899999999999999 6788
Q ss_pred cCCCC--CceEEEEeCccc--cccccCCcccccccccC--------CCeeeccceEEEcCCCcEEEEcccCCeEEeCcee
Q 011116 328 ALPPG--QKGELWLRGPTI--MKGYVGDDKATSETVHS--------EGWLKTGDLCYFDSNGFLFIVDRLKELIKYKAYQ 395 (493)
Q Consensus 328 ~~~~g--~~Gel~v~~~~~--~~gy~~~~~~~~~~~~~--------~~~~~TgD~~~~~~~g~~~~~GR~~d~i~~~G~~ 395 (493)
+++.| +.|||+++|+.+ +.||++++. +...++. .+||+|||+|++|+||++++.||.||+||++|++
T Consensus 311 ~~~~g~~~~Gel~v~g~~~~~~~gy~~~~~-~~~~~~g~~~~~~~~~~~~~TGDlg~~d~dG~l~~~gR~~d~ik~~G~~ 389 (499)
T PLN03051 311 PYPDDQPCVGEVALAPPMLGASDRLLNADH-DKVYYKGMPMYGSKGMPLRRHGDIMKRTPGGYFCVQGRADDTMNLGGIK 389 (499)
T ss_pred CCCCCCCcceEEEEecCcCCCCccccCCcc-cceeeecCCccccCCcceeecCCeEEECCCCcEEEEeccCCEEeeCCEE
Confidence 89888 489999999976 579997653 3222211 1278999999999999999999999999999999
Q ss_pred eChHHHHHHHhc-CCCcceEEEEeeeCCCCC-eeEEEEE---EeCCCC-CCCHHHHHHHH----HhcCCCCCCcceEEEe
Q 011116 396 VPPVELEHLLHS-NPEIADAAVIPYPDEEAG-QIPMAFV---VRKPGS-NITEAEIMDFI----AKQVAPYKKIRRVAFI 465 (493)
Q Consensus 396 i~~~~ie~~l~~-~~~v~~~~v~~~~~~~~~-~~~~~~v---~~~~~~-~~~~~~l~~~l----~~~l~~~~~p~~~~~~ 465 (493)
|+|.|||++|.+ ||+|.+++|++++++..+ +.++++| ++.++. ..+.+++++++ +++|+++..|..+.++
T Consensus 390 v~p~EIE~~l~~~~p~V~~aavvg~~d~~~g~~~~~a~v~~~v~~~~~~~~~~~~l~~~~~~~l~~~l~~~~~~~~i~~v 469 (499)
T PLN03051 390 TSSVEIERACDRAVAGIAETAAVGVAPPDGGPELLVIFLVLGEEKKGFDQARPEALQKKFQEAIQTNLNPLFKVSRVKIV 469 (499)
T ss_pred CCHHHHHHHHHhcCCCcceEEEEEecCCCCCceEEEEEEEcceecccccccchHHHHHHHHHHHHhhcCCccCCceEEEc
Confidence 999999999996 999999999999998888 6788888 776654 45666777665 4457777777789999
Q ss_pred ccccCCCCCccchHHHHHHHhhCCC
Q 011116 466 NSIPKSTAGKILRRELVTHAISGNL 490 (493)
Q Consensus 466 ~~lP~t~~GK~~r~~l~~~~~~~~~ 490 (493)
++||+|++||++|+.||+.+.+.-.
T Consensus 470 ~~lP~t~~GKi~r~~L~~~~~~~~~ 494 (499)
T PLN03051 470 PELPRNASNKLLRRVLRDQLKKELS 494 (499)
T ss_pred CCCCCCCCccHHHHHHHHHHHHhhc
Confidence 9999999999999999998876433
No 57
>PLN03102 acyl-activating enzyme; Provisional
Probab=100.00 E-value=7.3e-62 Score=502.50 Aligned_cols=460 Identities=26% Similarity=0.405 Sum_probs=366.2
Q ss_pred ccchhhhHHHHHHhhCCCCCCCEEEEECCCCCCcHHHHHHHHHHcCCeeccCCCCCCHHHHHHHHhhcCCeEEEEcCCCc
Q 011116 12 NSSARFTLSHALSKRDSLCRKTTSLTSSPLPPSTSPVLYFSLLSLGVVISPANPLSSTSEVSHQIQLSKPSIAFATSHTS 91 (493)
Q Consensus 12 ~~~~~~~lA~~L~~~~gl~~gd~V~l~~~~~~~~~~~~~lA~~~~G~~~v~i~~~~~~~~l~~~l~~~~~~~il~~~~~~ 91 (493)
++++++ |++| ...|+++||+|+++++ |++++++++|||+++|++++|+++.++.+++.++++.++++++|++++..
T Consensus 47 ~~~~~~--a~~L-~~~Gl~~gd~Vai~~~-n~~e~~~~~la~~~~G~~~vpl~~~~~~~~l~~~l~~~~~~~ii~~~~~~ 122 (579)
T PLN03102 47 DRCCRL--AASL-ISLNITKNDVVSVLAP-NTPAMYEMHFAVPMAGAVLNPINTRLDATSIAAILRHAKPKILFVDRSFE 122 (579)
T ss_pred HHHHHH--HHHH-HHcCCCCCCEEEEEcC-CcHHHHHHHHHHHhcCcEEeeccccCCHHHHHHHHhccCCeEEEEChhhH
Confidence 345555 9999 7789999999999999 99999999999999999999999999999999999999999999987654
Q ss_pred ccCCC------------CCcEEEecCc-----------hhhhhhccCcccccc-cCCCCCCCCCCeEEEEccCCCCCCcc
Q 011116 92 YKLPS------------NLRTILMDSP-----------EFISLLNQNEDVADF-ANSNMTVYQSDPAAILYSSGTTGKVK 147 (493)
Q Consensus 92 ~~~~~------------~~~~~~~~~~-----------~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~i~~TSGTTG~pK 147 (493)
..+.+ ..+++.++.. ++..+.......... ........++++++++|||||||.||
T Consensus 123 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~il~TSGTTG~PK 202 (579)
T PLN03102 123 PLAREVLHLLSSEDSNLNLPVIFIHEIDFPKRPSSEELDYECLIQRGEPTPSLVARMFRIQDEHDPISLNYTSGTTADPK 202 (579)
T ss_pred HHHHHHHhhccccccccCceEEEecccccccCCcccccCHHHHHhccCCCCcccccccccCCCCCcEEEEeCCcCCCCCC
Confidence 32221 1234443321 122222111100000 00011235689999999999999999
Q ss_pred ceecchHHHHHHHHHhhhhcccCCCCCCCCCCcEEEEecChhHHHHHHHHHHHHhcCCeEEEecCCCHHHHHHHHHhcCe
Q 011116 148 GVLLSHLNVIAIIAGYYHVTEETDPNEGPPPHPVSFFTLPMFHVFGFFMLVRAASKGETLVFMERFDFEKMLKAVENYRV 227 (493)
Q Consensus 148 ~v~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pl~~~~g~~~~~~~l~~G~~~~~~~~~~~~~~~~~l~~~~~ 227 (493)
+|.++|.++..........+ .....+.++..+|++|..++...+.++..|+++++....++..+++.++++++
T Consensus 203 ~v~~s~~~~~~~~~~~~~~~-------~~~~~~~~l~~~pl~h~~g~~~~~~~~~~g~~~v~~~~~~~~~~~~~i~~~~~ 275 (579)
T PLN03102 203 GVVISHRGAYLSTLSAIIGW-------EMGTCPVYLWTLPMFHCNGWTFTWGTAARGGTSVCMRHVTAPEIYKNIEMHNV 275 (579)
T ss_pred EEEEecHHHHHHHHHHHhhc-------CCCCCCeEEecCChhhhcchhHHHHHHHhcCcEEeeccCChHHHHHHHHHcCC
Confidence 99999999754433332222 22566788999999999998777778899999998887889999999999999
Q ss_pred eecccChHHHHHHHhcccCCCCCCCCeeEEEecCCCCCHHHHHHHHHhCCCCceeccccccccCCccccccCCCC-----
Q 011116 228 TYMPVSPPLIVAFINSKLTDKYDLSSLQLLGCGGAPLGKEVTLKFKEKFPNVEIRQGYGLTETGGAGSRVIGPDE----- 302 (493)
Q Consensus 228 t~l~~~P~~~~~l~~~~~~~~~~l~~lr~v~~~Ge~~~~~~~~~~~~~~~~~~v~~~yG~tE~g~~~~~~~~~~~----- 302 (493)
|++.++|+++..|.+.........++++.+++||+++++++.+++++ + ++++++.||+||+++.++.+.....
T Consensus 276 t~~~~~P~~~~~l~~~~~~~~~~~~~~~~~~~gg~~~~~~~~~~~~~-~-g~~i~~~YG~tE~~~~~~~~~~~~~~~~~~ 353 (579)
T PLN03102 276 THMCCVPTVFNILLKGNSLDLSPRSGPVHVLTGGSPPPAALVKKVQR-L-GFQVMHAYGLTEATGPVLFCEWQDEWNRLP 353 (579)
T ss_pred eEEEeChHHHHHHHhCcccccCCcccceEEEECCCCCCHHHHHHHHH-c-CCeEEeecCccccCccccccccccccccCC
Confidence 99999999999998865433334567888999999999999999876 5 8899999999999865433211100
Q ss_pred -------CCCCCccccccCCceEEEEcCCCCccCCC--CCceEEEEeCccccccccCCcccccccccCCCeeeccceEEE
Q 011116 303 -------AERHGSVGRLAELMEAKIVDPATGEALPP--GQKGELWLRGPTIMKGYVGDDKATSETVHSEGWLKTGDLCYF 373 (493)
Q Consensus 303 -------~~~~~~~g~p~~~~~~~i~d~~~~~~~~~--g~~Gel~v~~~~~~~gy~~~~~~~~~~~~~~~~~~TgD~~~~ 373 (493)
....+..+.+.+ .+++.+.+.+++++. ++.|||+++|+.++.||+++++.+.+.| .+|||+|||+|++
T Consensus 354 ~~~~~~~~~~~g~~~~~~~--~v~i~~~~~~~~v~~~~~~~GEl~v~g~~~~~GY~~~~~~t~~~f-~~gw~~TGDlg~~ 430 (579)
T PLN03102 354 ENQQMELKARQGVSILGLA--DVDVKNKETQESVPRDGKTMGEIVIKGSSIMKGYLKNPKATSEAF-KHGWLNTGDVGVI 430 (579)
T ss_pred cccccccccCCCccccccc--ceEEeccccccccCCCCCCceEEEEECcchhhhhcCChhhhHhhh-ccCceecCceEEE
Confidence 001122222333 456667666777764 3679999999999999999999998888 4799999999999
Q ss_pred cCCCcEEEEcccCCeEEeCceeeChHHHHHHHhcCCCcceEEEEeeeCCCCCeeEEEEEEeCCCCCC----------CHH
Q 011116 374 DSNGFLFIVDRLKELIKYKAYQVPPVELEHLLHSNPEIADAAVIPYPDEEAGQIPMAFVVRKPGSNI----------TEA 443 (493)
Q Consensus 374 ~~~g~~~~~GR~~d~i~~~G~~i~~~~ie~~l~~~~~v~~~~v~~~~~~~~~~~~~~~v~~~~~~~~----------~~~ 443 (493)
++||++++.||.+|+|+.+|.+|+|.+||++|.++|.|.+++|++.+++..++.+++++++.++... ...
T Consensus 431 d~dG~l~i~GR~~d~i~~~G~~v~p~eIE~~l~~~p~V~~a~vv~~~~~~~~~~~~a~v~~~~~~~~~~~~~~~~~~~~~ 510 (579)
T PLN03102 431 HPDGHVEIKDRSKDIIISGGENISSVEVENVLYKYPKVLETAVVAMPHPTWGETPCAFVVLEKGETTKEDRVDKLVTRER 510 (579)
T ss_pred cCCCeEEEEeccCcEEEECCEEECHHHHHHHHHhCCCcceeEEEeccCccccceeEEEEEecCcccccccccccccccHH
Confidence 9999999999999999999999999999999999999999999999998888899999998765332 356
Q ss_pred HHHHHHHhcCCCCCCcceEEEeccccCCCCCccchHHHHHHHhh
Q 011116 444 EIMDFIAKQVAPYKKIRRVAFINSIPKSTAGKILRRELVTHAIS 487 (493)
Q Consensus 444 ~l~~~l~~~l~~~~~p~~~~~~~~lP~t~~GK~~r~~l~~~~~~ 487 (493)
+++++++++|++|++|..+++++++|+|++||++|+.|++++.+
T Consensus 511 ~l~~~~~~~L~~~~~P~~i~~~~~~P~t~~gKi~r~~L~~~~~~ 554 (579)
T PLN03102 511 DLIEYCRENLPHFMCPRKVVFLQELPKNGNGKILKPKLRDIAKG 554 (579)
T ss_pred HHHHHHHhhcccccCCeEEEEcccCCCCCcccccHHHHHHHHHH
Confidence 89999999999999999999999999999999999999998754
No 58
>PRK07008 long-chain-fatty-acid--CoA ligase; Validated
Probab=100.00 E-value=1.3e-61 Score=497.66 Aligned_cols=456 Identities=23% Similarity=0.357 Sum_probs=378.8
Q ss_pred hHHHHHHhhCCCCCCCEEEEECCCCCCcHHHHHHHHHHcCCeeccCCCCCCHHHHHHHHhhcCCeEEEEcCCCcccCCC-
Q 011116 18 TLSHALSKRDSLCRKTTSLTSSPLPPSTSPVLYFSLLSLGVVISPANPLSSTSEVSHQIQLSKPSIAFATSHTSYKLPS- 96 (493)
Q Consensus 18 ~lA~~L~~~~gl~~gd~V~l~~~~~~~~~~~~~lA~~~~G~~~v~i~~~~~~~~l~~~l~~~~~~~il~~~~~~~~~~~- 96 (493)
++|++| .+.|+++||+|+++++ |+++++++++||+++|++++|+++..+.+++..+++.+++++++++++..+.+.+
T Consensus 51 ~~a~~L-~~~g~~~~d~v~i~~~-~~~~~~~~~la~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~ 128 (539)
T PRK07008 51 QLAQAL-AALGVEPGDRVGTLAW-NGYRHLEAYYGVSGSGAVCHTINPRLFPEQIAYIVNHAEDRYVLFDLTFLPLVDAL 128 (539)
T ss_pred HHHHHH-HHcCCCCCCEEEEEcC-CcHHHHHHHHHHHhcCcEEeecccccCHHHHHHHHhccCCcEEEEcchhHHHHHHH
Confidence 459999 7789999999999999 9999999999999999999999999999999999999999999998765432211
Q ss_pred -----CCc-EEEecC-----------chhhhhhccCcccccccCCCCCCCCCCeEEEEccCCCCCCccceecchHHHHHH
Q 011116 97 -----NLR-TILMDS-----------PEFISLLNQNEDVADFANSNMTVYQSDPAAILYSSGTTGKVKGVLLSHLNVIAI 159 (493)
Q Consensus 97 -----~~~-~~~~~~-----------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~TSGTTG~pK~v~~t~~~~~~~ 159 (493)
... ++.+.. ..+.++..... + ........++++++++|||||||.||+|.++|.++...
T Consensus 129 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~---~-~~~~~~~~~~~~~~i~~TSGTTG~PK~v~~s~~~~~~~ 204 (539)
T PRK07008 129 APQCPNVKGWVAMTDAAHLPAGSTPLLCYETLVGAQD---G-DYDWPRFDENQASSLCYTSGTTGNPKGALYSHRSTVLH 204 (539)
T ss_pred HhhCCCceEEEEEccCCccccCCcccccHHHHhcccC---C-CcCcccCCcccceEEEECCCCCCCCcEEEEecHHHHHH
Confidence 111 111111 11222222111 1 11122445688999999999999999999999998654
Q ss_pred HHH--hhhhcccCCCCCCCCCCcEEEEecChhHHHHHHHHHHHHhcCCeEEEe-cCCCHHHHHHHHHhcCeeecccChHH
Q 011116 160 IAG--YYHVTEETDPNEGPPPHPVSFFTLPMFHVFGFFMLVRAASKGETLVFM-ERFDFEKMLKAVENYRVTYMPVSPPL 236 (493)
Q Consensus 160 ~~~--~~~~~~~~~~~~~~~~~~~~~~~~pl~~~~g~~~~~~~l~~G~~~~~~-~~~~~~~~~~~l~~~~~t~l~~~P~~ 236 (493)
... ....+ ++.++|+++...|++|..++...+.++..|+++++. +.++++.+++.++++++|++.++|++
T Consensus 205 ~~~~~~~~~~-------~~~~~d~~l~~~p~~h~~~~~~~~~~l~~G~~~~~~~~~~~~~~~~~~l~~~~vt~~~~~P~~ 277 (539)
T PRK07008 205 AYGAALPDAM-------GLSARDAVLPVVPMFHVNAWGLPYSAPLTGAKLVLPGPDLDGKSLYELIEAERVTFSAGVPTV 277 (539)
T ss_pred HHHhhccccc-------CCCCCceEEecCchHHhhhHHHHHHHHhcCceEEEecCCcCHHHHHHHHHHcCCEEEEechHH
Confidence 322 22222 457889999999999988876677889999999987 45789999999999999999999999
Q ss_pred HHHHHhcccCCCCCCCCeeEEEecCCCCCHHHHHHHHHhCCCCceeccccccccCCccccccCCC---------CCCCCC
Q 011116 237 IVAFINSKLTDKYDLSSLQLLGCGGAPLGKEVTLKFKEKFPNVEIRQGYGLTETGGAGSRVIGPD---------EAERHG 307 (493)
Q Consensus 237 ~~~l~~~~~~~~~~l~~lr~v~~~Ge~~~~~~~~~~~~~~~~~~v~~~yG~tE~g~~~~~~~~~~---------~~~~~~ 307 (493)
+..+++.......+++++|.++++|+++++++.+++++.+ ++++++.||+||++..+....... ......
T Consensus 278 ~~~l~~~~~~~~~~~~~l~~~~~~G~~l~~~~~~~~~~~~-~~~l~~~YG~tE~~~~~~~~~~~~~~~~~~~~~~~~~~~ 356 (539)
T PRK07008 278 WLGLLNHMREAGLRFSTLRRTVIGGSACPPAMIRTFEDEY-GVEVIHAWGMTEMSPLGTLCKLKWKHSQLPLDEQRKLLE 356 (539)
T ss_pred HHHHHhcccccCCCcccceEEEEcCCCCCHHHHHHHHHHh-CCceecccccccccccceecccccccccCCchhhhhhcc
Confidence 9999887766666788999999999999999999999998 899999999999986544321110 011235
Q ss_pred ccccccCCceEEEEcCCCCccCCCC--CceEEEEeCccccccccCCcccccccccCCCeeeccceEEEcCCCcEEEEccc
Q 011116 308 SVGRLAELMEAKIVDPATGEALPPG--QKGELWLRGPTIMKGYVGDDKATSETVHSEGWLKTGDLCYFDSNGFLFIVDRL 385 (493)
Q Consensus 308 ~~g~p~~~~~~~i~d~~~~~~~~~g--~~Gel~v~~~~~~~gy~~~~~~~~~~~~~~~~~~TgD~~~~~~~g~~~~~GR~ 385 (493)
+.|+|.++++++|+| ++++.++.+ +.|||+++|+.+..||++++. ..+ .+|||+|||++++++||++++.||.
T Consensus 357 ~~G~p~pg~~~~i~d-~~~~~~~~~~~~~Gei~v~g~~~~~gy~~~~~---~~~-~~g~~~TGD~~~~~~dg~l~~~GR~ 431 (539)
T PRK07008 357 KQGRVIYGVDMKIVG-DDGRELPWDGKAFGDLQVRGPWVIDRYFRGDA---SPL-VDGWFPTGDVATIDADGFMQITDRS 431 (539)
T ss_pred cCCccccceEEEEEC-CCCCccCCCCCcceEEEEeCCccchhhcCChh---hhh-cCCCcccCceEEEcCCCcEEEeecc
Confidence 789999999999999 567777643 579999999999999999873 234 2689999999999999999999999
Q ss_pred CCeEEeCceeeChHHHHHHHhcCCCcceEEEEeeeCCCCCeeEEEEEEeCCCCCCCHHHHHHHHHhcCCCCCCcceEEEe
Q 011116 386 KELIKYKAYQVPPVELEHLLHSNPEIADAAVIPYPDEEAGQIPMAFVVRKPGSNITEAEIMDFIAKQVAPYKKIRRVAFI 465 (493)
Q Consensus 386 ~d~i~~~G~~i~~~~ie~~l~~~~~v~~~~v~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~l~~~l~~~~~p~~~~~~ 465 (493)
+|+||.+|.+++|.+||+++..+|.|.++++++.+++..++.++++++..++...+.++++++++++++++++|+.+.++
T Consensus 432 ~d~i~~~G~~v~p~eIE~~l~~~p~v~~~~v~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~~~l~~~~~P~~i~~v 511 (539)
T PRK07008 432 KDVIKSGGEWISSIDIENVAVAHPAVAEAACIACAHPKWDERPLLVVVKRPGAEVTREELLAFYEGKVAKWWIPDDVVFV 511 (539)
T ss_pred cCEEEeCCeEEcHHHHHHHHHhCCceeEEEEEecCCchhccceEEEEEeCCCCccCHHHHHHHHHhhcccccCCeEEEEe
Confidence 99999999999999999999999999999999999887788888998887776678899999999999999999999999
Q ss_pred ccccCCCCCccchHHHHHHHhhCCCCC
Q 011116 466 NSIPKSTAGKILRRELVTHAISGNLSK 492 (493)
Q Consensus 466 ~~lP~t~~GK~~r~~l~~~~~~~~~~~ 492 (493)
+++|+|++||++|+.|++++.+..|+.
T Consensus 512 ~~lP~t~sgKi~r~~l~~~~~~~~~~~ 538 (539)
T PRK07008 512 DAIPHTATGKLQKLKLREQFRDYVLPT 538 (539)
T ss_pred cCCCCCCccceeHHHHHHHHHhhcccC
Confidence 999999999999999999999887763
No 59
>PRK06188 acyl-CoA synthetase; Validated
Probab=100.00 E-value=2.1e-61 Score=495.19 Aligned_cols=460 Identities=26% Similarity=0.377 Sum_probs=389.1
Q ss_pred hHHHHHHhhCCCCCCCEEEEECCCCCCcHHHHHHHHHHcCCeeccCCCCCCHHHHHHHHhhcCCeEEEEcCCC-cccCC-
Q 011116 18 TLSHALSKRDSLCRKTTSLTSSPLPPSTSPVLYFSLLSLGVVISPANPLSSTSEVSHQIQLSKPSIAFATSHT-SYKLP- 95 (493)
Q Consensus 18 ~lA~~L~~~~gl~~gd~V~l~~~~~~~~~~~~~lA~~~~G~~~v~i~~~~~~~~l~~~l~~~~~~~il~~~~~-~~~~~- 95 (493)
++|..| .+.|+++|++|+++++ |+++++++++||+++|++++|+++..+.+++..+++.++++.+++++.. .....
T Consensus 49 ~~a~~L-~~~gv~~~~~V~i~~~-~~~~~~~~~la~~~~G~~~v~l~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~ 126 (524)
T PRK06188 49 RYIQAF-EALGLGTGDAVALLSL-NRPEVLMAIGAAQLAGLRRTALHPLGSLDDHAYVLEDAGISTLIVDPAPFVERALA 126 (524)
T ss_pred HHHHHH-HHcCCCCCCEEEEECC-CCHHHHHHHHHHHHhCCEEEecccCCCHHHHHHHHHhcCceEEEEecchhhHHHHH
Confidence 359999 7789999999999999 9999999999999999999999999999999999999999999998762 21111
Q ss_pred --C---C-CcEEEecCc-hhhhhhccCcccccccCCCCCCCCCCeEEEEccCCCCCCccceecchHHHHHHHHHhhhhcc
Q 011116 96 --S---N-LRTILMDSP-EFISLLNQNEDVADFANSNMTVYQSDPAAILYSSGTTGKVKGVLLSHLNVIAIIAGYYHVTE 168 (493)
Q Consensus 96 --~---~-~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~TSGTTG~pK~v~~t~~~~~~~~~~~~~~~~ 168 (493)
. . ...+.+... .+..+....... ..........++++++++|||||||.||+|.++|.++..........+.
T Consensus 127 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~a~i~~TSGtTG~pk~v~~s~~~l~~~~~~~~~~~~ 205 (524)
T PRK06188 127 LLARVPSLKHVLTLGPVPDGVDLLAAAAKF-GPAPLVAAALPPDIAGLAYTGGTTGKPKGVMGTHRSIATMAQIQLAEWE 205 (524)
T ss_pred HhhhcCCceEEEEeCCccchhhHHHhhhcc-CcccccccCCCCCeEEEEeCCCCCCCCceeeeehHHHHHHHHHHHhhcC
Confidence 1 1 112222211 111111111100 1111112234566999999999999999999999999988887766653
Q ss_pred cCCCCCCCCCCcEEEEecChhHHHHHHHHHHHHhcCCeEEEecCCCHHHHHHHHHhcCeeecccChHHHHHHHhcccCCC
Q 011116 169 ETDPNEGPPPHPVSFFTLPMFHVFGFFMLVRAASKGETLVFMERFDFEKMLKAVENYRVTYMPVSPPLIVAFINSKLTDK 248 (493)
Q Consensus 169 ~~~~~~~~~~~~~~~~~~pl~~~~g~~~~~~~l~~G~~~~~~~~~~~~~~~~~l~~~~~t~l~~~P~~~~~l~~~~~~~~ 248 (493)
+..++++++.+|++|..++. ++.+++.|+++++.+..++..+++.++++++|++.++|+++..+++......
T Consensus 206 -------~~~~~~~l~~~pl~~~~g~~-~~~~l~~G~~~~~~~~~~~~~~~~~i~~~~~t~~~~~P~~l~~l~~~~~~~~ 277 (524)
T PRK06188 206 -------WPADPRFLMCTPLSHAGGAF-FLPTLLRGGTVIVLAKFDPAEVLRAIEEQRITATFLVPTMIYALLDHPDLRT 277 (524)
T ss_pred -------CCcCcEEEEecCchhhhhHH-HHHHHHcCCEEEEcCCCCHHHHHHHHHHhCCEEEEehHHHHHHHHhCcCccC
Confidence 47889999999999988864 5778999999999988899999999999999999999999999998876666
Q ss_pred CCCCCeeEEEecCCCCCHHHHHHHHHhCCCCceeccccccccCCccccccCCC----CCCCCCccccccCCceEEEEcCC
Q 011116 249 YDLSSLQLLGCGGAPLGKEVTLKFKEKFPNVEIRQGYGLTETGGAGSRVIGPD----EAERHGSVGRLAELMEAKIVDPA 324 (493)
Q Consensus 249 ~~l~~lr~v~~~Ge~~~~~~~~~~~~~~~~~~v~~~yG~tE~g~~~~~~~~~~----~~~~~~~~g~p~~~~~~~i~d~~ 324 (493)
..++++|.+++||++++++..+.+.+.+ +..+++.||+||++...+...... ......++|+|++++.++|+| +
T Consensus 278 ~~l~~lr~~~~gg~~~~~~~~~~~~~~~-~~~~~~~YG~tE~~~~~~~~~~~~~~~~~~~~~~~~G~p~~g~~v~i~~-~ 355 (524)
T PRK06188 278 RDLSSLETVYYGASPMSPVRLAEAIERF-GPIFAQYYGQTEAPMVITYLRKRDHDPDDPKRLTSCGRPTPGLRVALLD-E 355 (524)
T ss_pred CCCcceeEEEEcCCCCCHHHHHHHHHHh-CchhhheeCccccCCceeecCchhccccccccCCccccccCCcEEEEEc-C
Confidence 6788999999999999999999998888 788999999999976554422111 123456789999999999999 5
Q ss_pred CCccCCCCCceEEEEeCccccccccCCcccccccccCCCeeeccceEEEcCCCcEEEEcccCCeEEeCceeeChHHHHHH
Q 011116 325 TGEALPPGQKGELWLRGPTIMKGYVGDDKATSETVHSEGWLKTGDLCYFDSNGFLFIVDRLKELIKYKAYQVPPVELEHL 404 (493)
Q Consensus 325 ~~~~~~~g~~Gel~v~~~~~~~gy~~~~~~~~~~~~~~~~~~TgD~~~~~~~g~~~~~GR~~d~i~~~G~~i~~~~ie~~ 404 (493)
++++++.|+.|||+++|+.+..||++++..+...+ .+|||+|||+++++++|.+++.||.+++|+++|++|+|.+||++
T Consensus 356 ~~~~~~~g~~Gel~v~~~~~~~gy~~~~~~~~~~~-~~g~~~TGDl~~~~~~g~~~~~GR~~~~i~~~G~~i~~~~IE~~ 434 (524)
T PRK06188 356 DGREVAQGEVGEICVRGPLVMDGYWNRPEETAEAF-RDGWLHTGDVAREDEDGFYYIVDRKKDMIVTGGFNVFPREVEDV 434 (524)
T ss_pred CCCCCCCCCeeEEEEECcchhhhhcCChHHhhhhh-cCCceeecceEEEcCCccEEEEeccccceecCCEEECHHHHHHH
Confidence 58999999999999999999999999998888877 58999999999999999999999999999999999999999999
Q ss_pred HhcCCCcceEEEEeeeCCCCCeeEEEEEEeCCCCCCCHHHHHHHHHhcCCCCCCcceEEEeccccCCCCCccchHHHHHH
Q 011116 405 LHSNPEIADAAVIPYPDEEAGQIPMAFVVRKPGSNITEAEIMDFIAKQVAPYKKIRRVAFINSIPKSTAGKILRRELVTH 484 (493)
Q Consensus 405 l~~~~~v~~~~v~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~l~~~l~~~~~p~~~~~~~~lP~t~~GK~~r~~l~~~ 484 (493)
|.++++|.+++|++.+++..++.+.+++++.+....+.+++++++++.++.+++|..+++++++|+|++||++|++|+++
T Consensus 435 l~~~~~v~~~~v~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~~~l~~~~~p~~i~~v~~~P~t~~gKi~r~~L~~~ 514 (524)
T PRK06188 435 LAEHPAVAQVAVIGVPDEKWGEAVTAVVVLRPGAAVDAAELQAHVKERKGSVHAPKQVDFVDSLPLTALGKPDKKALRAR 514 (524)
T ss_pred HHhCCCeeEEEEEeccCCCcCceEEEEEEECCCCCCCHHHHHHHHHHhcccCCCCcEEEEecCCCCCccccccHHHHHHH
Confidence 99999999999999988878889999999887767778899999999999999999999999999999999999999999
Q ss_pred HhhCCCC
Q 011116 485 AISGNLS 491 (493)
Q Consensus 485 ~~~~~~~ 491 (493)
+.++.+.
T Consensus 515 ~~~~~~~ 521 (524)
T PRK06188 515 YWEGRGR 521 (524)
T ss_pred HHhhccc
Confidence 9777664
No 60
>TIGR03098 ligase_PEP_1 acyl-CoA ligase (AMP-forming), exosortase system type 1 associated. This group of proteins contains an AMP-binding domain (pfam00501) associated with acyl CoA-ligases. These proteins are generally found in genomes containing the exosortase/PEP-CTERM protein expoert system, specifically the type 1 variant of this system described by the Genome Property GenProp0652. When found in this context they are invariably present next to a decarboxylase enzyme. A number of sequences from Burkholderia species also hit this model, but the genomic context is obviously different. The hypothesis of a constant substrate for this family is only strong where the exosortase context is present.
Probab=100.00 E-value=2.1e-61 Score=494.74 Aligned_cols=449 Identities=27% Similarity=0.371 Sum_probs=383.6
Q ss_pred hHHHHHHhhCCCCCCCEEEEECCCCCCcHHHHHHHHHHcCCeeccCCCCCCHHHHHHHHhhcCCeEEEEcCCCcccCCC-
Q 011116 18 TLSHALSKRDSLCRKTTSLTSSPLPPSTSPVLYFSLLSLGVVISPANPLSSTSEVSHQIQLSKPSIAFATSHTSYKLPS- 96 (493)
Q Consensus 18 ~lA~~L~~~~gl~~gd~V~l~~~~~~~~~~~~~lA~~~~G~~~v~i~~~~~~~~l~~~l~~~~~~~il~~~~~~~~~~~- 96 (493)
++|++| .+.|+++||+|+++++ |+++++++++||+++|++++|+++.++.+++..+++++++++++++.+....+..
T Consensus 37 ~~a~~l-~~~g~~~~~~V~i~~~-n~~~~~~~~lA~~~~G~~~v~l~~~~~~~~~~~~l~~~~~~~~i~~~~~~~~~~~~ 114 (515)
T TIGR03098 37 ALASGL-RGLGLARGERVAIYLD-KRLETVTAMFGAALAGGVFVPINPLLKAEQVAHILADCNVRLLVTSSERLDLLHPA 114 (515)
T ss_pred HHHHHH-HHcCCCCCCEEEEEcC-CCHHHHHHHHHHHhcCEEEEeCCCCCCHHHHHHHHHcCCCeEEEEccchhhhhHhh
Confidence 359999 7789999999999999 9999999999999999999999999999999999999999999998765543321
Q ss_pred --C----CcEEEecCc-----------hhhhhhccCcccccccCCCCCCCCCCeEEEEccCCCCCCccceecchHHHHHH
Q 011116 97 --N----LRTILMDSP-----------EFISLLNQNEDVADFANSNMTVYQSDPAAILYSSGTTGKVKGVLLSHLNVIAI 159 (493)
Q Consensus 97 --~----~~~~~~~~~-----------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~TSGTTG~pK~v~~t~~~~~~~ 159 (493)
. ...+.+++. .|..+..... .........+++++++|||||||.||++.++|.++..+
T Consensus 115 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~i~~TSGTTG~PK~v~~t~~~l~~~ 189 (515)
T TIGR03098 115 LPGCHDLRTLILVGEPAHASEGGGESPSWPKLLALGD-----ADPPHPVIDSDMAAILYTSGSTGRPKGVVLSHRNLVAG 189 (515)
T ss_pred hhcccccceEEEecCcccccCCccccccHHHhhcccc-----ccccCCCCcCCeEEEEECCCCCCCCceEEEecHHHHHH
Confidence 1 123333321 2333332211 11222345678999999999999999999999999888
Q ss_pred HHHhhhhcccCCCCCCCCCCcEEEEecChhHHHHHHHHHHHHhcCCeEEEecCCCHHHHHHHHHhcCeeecccChHHHHH
Q 011116 160 IAGYYHVTEETDPNEGPPPHPVSFFTLPMFHVFGFFMLVRAASKGETLVFMERFDFEKMLKAVENYRVTYMPVSPPLIVA 239 (493)
Q Consensus 160 ~~~~~~~~~~~~~~~~~~~~~~~~~~~pl~~~~g~~~~~~~l~~G~~~~~~~~~~~~~~~~~l~~~~~t~l~~~P~~~~~ 239 (493)
+......++ +.+++++++.+|++|..++..++.++..|+++++.+..+++.+++.++++++|++.++|+++..
T Consensus 190 ~~~~~~~~~-------~~~~d~~l~~~p~~~~~~~~~~~~~l~~G~~~~~~~~~~~~~~~~~i~~~~~t~~~~~P~~~~~ 262 (515)
T TIGR03098 190 AQSVATYLE-------NRPDDRLLAVLPLSFDYGFNQLTTAFYVGATVVLHDYLLPRDVLKALEKHGITGLAAVPPLWAQ 262 (515)
T ss_pred HHHHHHHhC-------CCcccEEEEECchhhHhHHHHHHHHHHcCCEEEEcCCCCHHHHHHHHHHcCCceEecChHHHHH
Confidence 777666553 4788999999999999999888999999999999988899999999999999999999999999
Q ss_pred HHhcccCCCCCCCCeeEEEecCCCCCHHHHHHHHHhCCCCceeccccccccCCccccccCCCCCCCCCccccccCCceEE
Q 011116 240 FINSKLTDKYDLSSLQLLGCGGAPLGKEVTLKFKEKFPNVEIRQGYGLTETGGAGSRVIGPDEAERHGSVGRLAELMEAK 319 (493)
Q Consensus 240 l~~~~~~~~~~l~~lr~v~~~Ge~~~~~~~~~~~~~~~~~~v~~~yG~tE~g~~~~~~~~~~~~~~~~~~g~p~~~~~~~ 319 (493)
|.+... ....++++|.++++|+++++++.+.+++.++++.+++.||+||++..... .........+++|+|.++++++
T Consensus 263 l~~~~~-~~~~~~~l~~~~~~g~~l~~~~~~~~~~~~~~~~~~~~YG~tE~~~~~~~-~~~~~~~~~~~vG~~~~~~~~~ 340 (515)
T TIGR03098 263 LAQLDW-PESAAPSLRYLTNSGGAMPRATLSRLRSFLPNARLFLMYGLTEAFRSTYL-PPEEVDRRPDSIGKAIPNAEVL 340 (515)
T ss_pred HHhccc-CCCCccceEEEEecCCcCCHHHHHHHHHHCCCCeEeeeeccccccceEec-ccccccCCCCCcceecCCCEEE
Confidence 877532 22356789999999999999999999999988899999999998764432 1212234567899999999999
Q ss_pred EEcCCCCccCCCCCceEEEEeCccccccccCCcccccccccC-----------CCeeeccceEEEcCCCcEEEEcccCCe
Q 011116 320 IVDPATGEALPPGQKGELWLRGPTIMKGYVGDDKATSETVHS-----------EGWLKTGDLCYFDSNGFLFIVDRLKEL 388 (493)
Q Consensus 320 i~d~~~~~~~~~g~~Gel~v~~~~~~~gy~~~~~~~~~~~~~-----------~~~~~TgD~~~~~~~g~~~~~GR~~d~ 388 (493)
|+| +++..++.|+.|||+++|+.++.||+++++.+.+.+.. ++||+|||+++++++|.+++.||.+|+
T Consensus 341 i~~-~~~~~~~~~~~Gel~v~g~~~~~gy~~~~~~~~~~~~~~~~~~~~~~~~~~~~~TGD~~~~~~~g~l~~~GR~~d~ 419 (515)
T TIGR03098 341 VLR-EDGSECAPGEEGELVHRGALVAMGYWNDPEKTAERFRPLPPRPGELHLPELAVWSGDTVRRDEEGFLYFVGRRDEM 419 (515)
T ss_pred EEC-CCCCCCCCCCceEEEEcCchhhccccCCchhhhhhhhccCCccccccccccceeccceEEEcCCceEEEEeccccc
Confidence 999 66888999999999999999999999998877665532 247999999999999999999999999
Q ss_pred EEeCceeeChHHHHHHHhcCCCcceEEEEeeeCCCCCeeEEEEEEeCCCCCCCHHHHHHHHHhcCCCCCCcceEEEeccc
Q 011116 389 IKYKAYQVPPVELEHLLHSNPEIADAAVIPYPDEEAGQIPMAFVVRKPGSNITEAEIMDFIAKQVAPYKKIRRVAFINSI 468 (493)
Q Consensus 389 i~~~G~~i~~~~ie~~l~~~~~v~~~~v~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~l~~~l~~~~~p~~~~~~~~l 468 (493)
|+.+|.+++|.+||+++.++|.|.+++|++.+++..++.++++++..+....+.++++++++++++++++|..++++++|
T Consensus 420 i~~~G~~v~~~eiE~~l~~~~~v~~~~v~~~~~~~~g~~~~~~~~~~~~~~~~~~~l~~~l~~~l~~~~~p~~i~~v~~i 499 (515)
T TIGR03098 420 IKTSGYRVSPTEVEEVAYATGLVAEAVAFGVPDPTLGQAIVLVVTPPGGEELDRAALLAECRARLPNYMVPALIHVRQAL 499 (515)
T ss_pred eecCCEEeCHHHHHHHHhcCCCeeEEEEEeccCcccCceEEEEEEeCCCCCCCHHHHHHHHHhhCccccCCCEEEEeccC
Confidence 99999999999999999999999999999999888889999998876666778899999999999999999999999999
Q ss_pred cCCCCCccchHHHHH
Q 011116 469 PKSTAGKILRRELVT 483 (493)
Q Consensus 469 P~t~~GK~~r~~l~~ 483 (493)
|+|++||++|++|++
T Consensus 500 P~t~~GK~~r~~L~~ 514 (515)
T TIGR03098 500 PRNANGKIDRKALAA 514 (515)
T ss_pred CCCCCCCCcHHHhcc
Confidence 999999999999974
No 61
>PRK06710 long-chain-fatty-acid--CoA ligase; Validated
Probab=100.00 E-value=2e-61 Score=499.20 Aligned_cols=460 Identities=30% Similarity=0.473 Sum_probs=382.7
Q ss_pred hHHHHHHhhCCCCCCCEEEEECCCCCCcHHHHHHHHHHcCCeeccCCCCCCHHHHHHHHhhcCCeEEEEcCCCcccCCC-
Q 011116 18 TLSHALSKRDSLCRKTTSLTSSPLPPSTSPVLYFSLLSLGVVISPANPLSSTSEVSHQIQLSKPSIAFATSHTSYKLPS- 96 (493)
Q Consensus 18 ~lA~~L~~~~gl~~gd~V~l~~~~~~~~~~~~~lA~~~~G~~~v~i~~~~~~~~l~~~l~~~~~~~il~~~~~~~~~~~- 96 (493)
++|++| .+.|+++||+|+++++ |+++++++++||+++|++++|++|..+.+++.++++.++++++++++.....+..
T Consensus 61 ~la~~L-~~~gv~~gd~V~i~~~-~~~~~~~~~lA~~~~G~~~vpi~p~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~~~ 138 (563)
T PRK06710 61 RFANYL-QKLGVEKGDRVAIMLP-NCPQAVIGYYGTLLAGGIVVQTNPLYTERELEYQLHDSGAKVILCLDLVFPRVTNV 138 (563)
T ss_pred HHHHHH-HHcCCCCCCEEEEECC-CChHHHHHHHHHHHcCeEEeccCcccCHHHHHHHHhccCCeEEEEeccchhhhhcc
Confidence 459999 7789999999999999 9999999999999999999999999999999999999999999998754332211
Q ss_pred ----CCcEEEec-Cch--------------------------------hhhhhccCcccccccCCCCCCCCCCeEEEEcc
Q 011116 97 ----NLRTILMD-SPE--------------------------------FISLLNQNEDVADFANSNMTVYQSDPAAILYS 139 (493)
Q Consensus 97 ----~~~~~~~~-~~~--------------------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~T 139 (493)
....+.+. ... |..+.... ...........+++++++||
T Consensus 139 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~a~i~~T 214 (563)
T PRK06710 139 QSATKIEHVIVTRIADFLPFPKNLLYPFVQKKQSNLVVKVSESETIHLWNSVEKEV----NTGVEVPCDPENDLALLQYT 214 (563)
T ss_pred chhhccceeEEeccccccccccccccchhhcccccccccccccchhhhhhhhhhcc----ccccccccCCCCCEEEEEcC
Confidence 01111110 000 00000000 00000111235789999999
Q ss_pred CCCCCCccceecchHHHHHHHHHhhhhcccCCCCCCCCCCcEEEEecChhHHHHH-HHHHHHHhcCCeEEEecCCCHHHH
Q 011116 140 SGTTGKVKGVLLSHLNVIAIIAGYYHVTEETDPNEGPPPHPVSFFTLPMFHVFGF-FMLVRAASKGETLVFMERFDFEKM 218 (493)
Q Consensus 140 SGTTG~pK~v~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pl~~~~g~-~~~~~~l~~G~~~~~~~~~~~~~~ 218 (493)
|||||.||+|.++|.++..+.......+.. .....+++++..|++|.+++ ..++.+++.|+++++.+.+++..+
T Consensus 215 SGTTG~PK~v~~s~~~l~~~~~~~~~~~~~-----~~~~~~~~l~~~p~~~~~g~~~~~~~~l~~G~~~~~~~~~~~~~~ 289 (563)
T PRK06710 215 GGTTGFPKGVMLTHKNLVSNTLMGVQWLYN-----CKEGEEVVLGVLPFFHVYGMTAVMNLSIMQGYKMVLIPKFDMKMV 289 (563)
T ss_pred CCCCCCCceEEEehHHHHHHHHHHHhhccC-----CCCCCceEEEeCchHHHHHHHHHHHHHHHcCCeEEEcCCCCHHHH
Confidence 999999999999999987654433322210 11345688999999999988 456678999999999888899999
Q ss_pred HHHHHhcCeeecccChHHHHHHHhcccCCCCCCCCeeEEEecCCCCCHHHHHHHHHhCCCCceeccccccccCCcccccc
Q 011116 219 LKAVENYRVTYMPVSPPLIVAFINSKLTDKYDLSSLQLLGCGGAPLGKEVTLKFKEKFPNVEIRQGYGLTETGGAGSRVI 298 (493)
Q Consensus 219 ~~~l~~~~~t~l~~~P~~~~~l~~~~~~~~~~l~~lr~v~~~Ge~~~~~~~~~~~~~~~~~~v~~~yG~tE~g~~~~~~~ 298 (493)
++.++++++|++.++|+++..++.........++++|.+++||+++++++.+++.+.+ ++.+++.||+||++.++....
T Consensus 290 ~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~~~~~~lr~v~~gg~~~~~~~~~~~~~~~-~~~~~~~YG~tE~~~~~~~~~ 368 (563)
T PRK06710 290 FEAIKKHKVTLFPGAPTIYIALLNSPLLKEYDISSIRACISGSAPLPVEVQEKFETVT-GGKLVEGYGLTESSPVTHSNF 368 (563)
T ss_pred HHHHHHcCCeEEeccHHHHHHHHcCCccccCChhhhhheeeCCCcCCHHHHHHHHHhh-CCCEecccccccCccccccCc
Confidence 9999999999999999999999876555555678999999999999999999999988 889999999999987654322
Q ss_pred CCCCCCCCCccccccCCceEEEEcCCCCccCCCCCceEEEEeCccccccccCCcccccccccCCCeeeccceEEEcCCCc
Q 011116 299 GPDEAERHGSVGRLAELMEAKIVDPATGEALPPGQKGELWLRGPTIMKGYVGDDKATSETVHSEGWLKTGDLCYFDSNGF 378 (493)
Q Consensus 299 ~~~~~~~~~~~g~p~~~~~~~i~d~~~~~~~~~g~~Gel~v~~~~~~~gy~~~~~~~~~~~~~~~~~~TgD~~~~~~~g~ 378 (493)
. ......+++|+|.+++.+++++++++.+++.|+.|||+++|+.++.||+++++.+...+ .+|||+|||+++++++|.
T Consensus 369 ~-~~~~~~~~~G~~~~~~~~~i~~~~~~~~~~~g~~Gel~v~g~~~~~gY~~~~~~~~~~~-~~g~~~TGD~~~~~~~g~ 446 (563)
T PRK06710 369 L-WEKRVPGSIGVPWPDTEAMIMSLETGEALPPGEIGEIVVKGPQIMKGYWNKPEETAAVL-QDGWLHTGDVGYMDEDGF 446 (563)
T ss_pred c-cccccCCccCCCCCCCeEEEEECCCCccCCCCCceEEEEecCccchhhhCChHHHhhhc-ccCcccccceEEEcCCCc
Confidence 1 12234568999999999999998889999999999999999999999999999888877 489999999999999999
Q ss_pred EEEEcccCCeEEeCceeeChHHHHHHHhcCCCcceEEEEeeeCCCCCeeEEEEEEeCCCCCCCHHHHHHHHHhcCCCCCC
Q 011116 379 LFIVDRLKELIKYKAYQVPPVELEHLLHSNPEIADAAVIPYPDEEAGQIPMAFVVRKPGSNITEAEIMDFIAKQVAPYKK 458 (493)
Q Consensus 379 ~~~~GR~~d~i~~~G~~i~~~~ie~~l~~~~~v~~~~v~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~l~~~l~~~~~ 458 (493)
+++.||.+|+|+++|.+|+|.+||++|.++++|.+++|++.+++..++.++++++..++...+.+++.++++++++.+++
T Consensus 447 ~~~~GR~dd~i~~~G~~v~p~eiE~~l~~~~~v~~~~v~~~~~~~~g~~~~~~v~~~~~~~~~~~~l~~~~~~~l~~~~~ 526 (563)
T PRK06710 447 FYVKDRKKDMIVASGFNVYPREVEEVLYEHEKVQEVVTIGVPDPYRGETVKAFVVLKEGTECSEEELNQFARKYLAAYKV 526 (563)
T ss_pred EEEeeccccEEEECCEEECHHHHHHHHHhCcceeeEEEEccccCCcCceeEEEEEECCCCCCCHHHHHHHHHHhcccccC
Confidence 99999999999999999999999999999999999999999988888899999998877777889999999999999999
Q ss_pred cceEEEeccccCCCCCccchHHHHHHHhhCCCC
Q 011116 459 IRRVAFINSIPKSTAGKILRRELVTHAISGNLS 491 (493)
Q Consensus 459 p~~~~~~~~lP~t~~GK~~r~~l~~~~~~~~~~ 491 (493)
|..+.+++++|+|++||++|+.|++++..++..
T Consensus 527 P~~~~~v~~iP~t~~GKi~r~~L~~~~~~~~~~ 559 (563)
T PRK06710 527 PKVYEFRDELPKTTVGKILRRVLIEEEKRKNED 559 (563)
T ss_pred CcEEEEcccCCCCccchhhHHHHHHHHhhcCcc
Confidence 999999999999999999999999999876654
No 62
>PRK07769 long-chain-fatty-acid--CoA ligase; Validated
Probab=100.00 E-value=1.3e-62 Score=513.74 Aligned_cols=453 Identities=24% Similarity=0.362 Sum_probs=366.1
Q ss_pred hHHHHHHhhCCCCCCCEEEEECCCCCCcHHHHHHHHHHcCCeeccC-CCCCC--HHHHHHHHhhcCCeEEEEcCCCcccC
Q 011116 18 TLSHALSKRDSLCRKTTSLTSSPLPPSTSPVLYFSLLSLGVVISPA-NPLSS--TSEVSHQIQLSKPSIAFATSHTSYKL 94 (493)
Q Consensus 18 ~lA~~L~~~~gl~~gd~V~l~~~~~~~~~~~~~lA~~~~G~~~v~i-~~~~~--~~~l~~~l~~~~~~~il~~~~~~~~~ 94 (493)
++|++| .+. +++||+|+++++ |++++++++|||+++|++++|+ ++..+ .+++.++++++++++++++++....+
T Consensus 67 ~lA~~L-~~~-~~~gd~V~i~~~-n~~e~~~~~lA~~~~G~v~vpl~~~~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~~ 143 (631)
T PRK07769 67 AVGARL-QQV-TKPGDRVAILAP-QNLDYLIAFFGALYAGRIAVPLFDPAEPGHVGRLHAVLDDCTPSAILTTTDSAEGV 143 (631)
T ss_pred HHHHHH-HHh-cCCCCEEEEEcC-CChHHHHHHHHHHHcCCEEEeeCCCCccchHHHHHHHHHhCCCCEEEEChHHHHHH
Confidence 359999 555 899999999999 9999999999999999999999 45554 68899999999999999987643322
Q ss_pred CC---------CCcEEEecCchhhhhhccCcccccccCCCCCCCCCCeEEEEccCCCCCCccceecchHHHHHHHHHhhh
Q 011116 95 PS---------NLRTILMDSPEFISLLNQNEDVADFANSNMTVYQSDPAAILYSSGTTGKVKGVLLSHLNVIAIIAGYYH 165 (493)
Q Consensus 95 ~~---------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~TSGTTG~pK~v~~t~~~~~~~~~~~~~ 165 (493)
.+ ...++.++. ... ... . ........++++++|+|||||||.||+|.++|.++.........
T Consensus 144 ~~~~~~~~~~~~~~~~~~~~--~~~---~~~---~-~~~~~~~~~~d~a~i~~TSGTTG~PKgV~~sh~~l~~~~~~~~~ 214 (631)
T PRK07769 144 RKFFRARPAKERPRVIAVDA--VPD---EVG---A-TWVPPEANEDTIAYLQYTSGSTRIPAGVQITHLNLPTNVLQVID 214 (631)
T ss_pred HHHHhhccccccceEEEccc--ccc---ccc---c-ccCCCCCCCCCeEEEEeCCCCCCCCcEEEEcHHHHHHHHHHHHH
Confidence 11 112222221 000 000 0 11112345789999999999999999999999999887776665
Q ss_pred hcccCCCCCCCCCCcEEEEecChhHHHHHHHHHHHHhcCCeEEEecC--C--CHHHHHHHHHhcCe---eecccChHHHH
Q 011116 166 VTEETDPNEGPPPHPVSFFTLPMFHVFGFFMLVRAASKGETLVFMER--F--DFEKMLKAVENYRV---TYMPVSPPLIV 238 (493)
Q Consensus 166 ~~~~~~~~~~~~~~~~~~~~~pl~~~~g~~~~~~~l~~G~~~~~~~~--~--~~~~~~~~l~~~~~---t~l~~~P~~~~ 238 (493)
.+. +.++++++..+|++|.+|+...+.+++.|+++++..+ + ++..+++.+.++++ +.+.++|.++.
T Consensus 215 ~~~-------~~~~d~~l~~~Pl~h~~gl~~~~~~~~~G~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~p~~~~ 287 (631)
T PRK07769 215 ALE-------GQEGDRGVSWLPFFHDMGLITVLLPALLGHYITFMSPAAFVRRPGRWIRELARKPGGTGGTFSAAPNFAF 287 (631)
T ss_pred HcC-------CCCcceEEEeCCCcCchhhHHHHHHHhhCCeEEEEChHHHHhCHHHHHHHHHhhccccCceEeeCCchHH
Confidence 553 4788999999999999999777788889999988753 3 78899999999876 78999999887
Q ss_pred HHHhcc--c---CCCCCCCCeeEEEecCCCCCHHHHHHHHHhCC-----CCceeccccccccCCccccccCCCC------
Q 011116 239 AFINSK--L---TDKYDLSSLQLLGCGGAPLGKEVTLKFKEKFP-----NVEIRQGYGLTETGGAGSRVIGPDE------ 302 (493)
Q Consensus 239 ~l~~~~--~---~~~~~l~~lr~v~~~Ge~~~~~~~~~~~~~~~-----~~~v~~~yG~tE~g~~~~~~~~~~~------ 302 (493)
.++... . ....+++++|.+++||+++++++.++|.+.|+ ...+++.||+||++...+.......
T Consensus 288 ~l~~~~~~~~~~~~~~~l~~lr~~~~gg~~l~~~~~~~~~~~~~~~g~~~~~i~~~YG~TE~~~~~~~~~~~~~~~~~~~ 367 (631)
T PRK07769 288 EHAAARGLPKDGEPPLDLSNVKGLLNGSEPVSPASMRKFNEAFAPYGLPPTAIKPSYGMAEATLFVSTTPMDEEPTVIYV 367 (631)
T ss_pred HHHHhhccchhcccCcchhheeeEEeccCCCCHHHHHHHHHHHhhcCCChhhcccccchhhheeEEeccCCCCCceEEEE
Confidence 776531 1 11346789999999999999999999999872 2469999999998765443211100
Q ss_pred -------------------CCCCCccccccCCceEEEEcCCCCccCCCCCceEEEEeCccccccccCCcccccccccC--
Q 011116 303 -------------------AERHGSVGRLAELMEAKIVDPATGEALPPGQKGELWLRGPTIMKGYVGDDKATSETVHS-- 361 (493)
Q Consensus 303 -------------------~~~~~~~g~p~~~~~~~i~d~~~~~~~~~g~~Gel~v~~~~~~~gy~~~~~~~~~~~~~-- 361 (493)
.....++|+|.++.+++|+|++++++++.|+.|||+++|+.++.||+++++.+.+.|..
T Consensus 368 ~~~~~~~~~~~~v~~~~~~~~~~~s~G~~~~~~~~~ivd~~~g~~~~~ge~GEl~v~gp~v~~GY~~~~~~t~~~f~~~~ 447 (631)
T PRK07769 368 DRDELNAGRFVEVPADAPNAVAQVSAGKVGVSEWAVIVDPETASELPDGQIGEIWLHGNNIGTGYWGKPEETAATFQNIL 447 (631)
T ss_pred cHHHHhCCCeEecCCCCCCceeEEeCCCcCCCcEEEEEcCCCCcCCCCCCEEEEEecCCCccccccCChhHHHHHHhhhc
Confidence 00124789999999999999888999999999999999999999999999988887742
Q ss_pred ---------------CCeeeccceEEEcCCCcEEEEcccCCeEEeCceeeChHHHHHHHhc-CCCcce--EEEEeeeC--
Q 011116 362 ---------------EGWLKTGDLCYFDSNGFLFIVDRLKELIKYKAYQVPPVELEHLLHS-NPEIAD--AAVIPYPD-- 421 (493)
Q Consensus 362 ---------------~~~~~TgD~~~~~~~g~~~~~GR~~d~i~~~G~~i~~~~ie~~l~~-~~~v~~--~~v~~~~~-- 421 (493)
+|||+|||+|+++ ||++++.||.+|+||++|++|+|.+||.+|.+ +|.|.+ ++++++++
T Consensus 448 ~~~~~~~~~~~~~~~~gw~~TGDlg~~~-dG~l~i~GR~~d~Ik~~G~~V~p~eIE~~l~~~~p~v~~~~~av~~v~d~~ 526 (631)
T PRK07769 448 KSRLSESHAEGAPDDALWVRTGDYGVYF-DGELYITGRVKDLVIIDGRNHYPQDLEYTAQEATKALRTGYVAAFSVPANQ 526 (631)
T ss_pred ccccccccccCcccCCCeeeccccccEE-CCEEEEEcccccEEEECCeeeCHHHHHHHHHhccccccCCcEEEEEecccc
Confidence 4899999999995 99999999999999999999999999999996 899998 89998887
Q ss_pred -----------------CCCCeeEEEEEEeCCC-CCCCHHHHHHHHHhcCCC-CC-CcceEEEec--cccCCCCCccchH
Q 011116 422 -----------------EEAGQIPMAFVVRKPG-SNITEAEIMDFIAKQVAP-YK-KIRRVAFIN--SIPKSTAGKILRR 479 (493)
Q Consensus 422 -----------------~~~~~~~~~~v~~~~~-~~~~~~~l~~~l~~~l~~-~~-~p~~~~~~~--~lP~t~~GK~~r~ 479 (493)
+..++.+++++++.++ ...+.++|.++++++++. ++ .|+.+++++ +||+|++||++|+
T Consensus 527 ~~~~~~~~~~~~~~~~~~~~ge~~~a~v~~~~~~~~~~~~~l~~~~~~~l~~~~~~~p~~~~~v~~~~lP~t~~GKi~r~ 606 (631)
T PRK07769 527 LPQVVFDDSHAGLKFDPEDTSEQLVIVAERAPGAHKLDPQPIADDIRAAIAVRHGVTVRDVLLVPAGSIPRTSSGKIARR 606 (631)
T ss_pred cccccccccccccccccCCCCccEEEEEEecCccccccHHHHHHHHHHHHHHHcCCCccEEEEECCCccccCCCcHHHHH
Confidence 4578889999998876 356788999999999985 56 488888886 7999999999999
Q ss_pred HHHHHHhhCCC
Q 011116 480 ELVTHAISGNL 490 (493)
Q Consensus 480 ~l~~~~~~~~~ 490 (493)
.|++.+.+..+
T Consensus 607 ~l~~~~~~~~~ 617 (631)
T PRK07769 607 ACRAAYLDGSL 617 (631)
T ss_pred HHHHHHHcCCC
Confidence 99999887654
No 63
>PRK05620 long-chain-fatty-acid--CoA ligase; Validated
Probab=100.00 E-value=2.1e-61 Score=499.92 Aligned_cols=459 Identities=23% Similarity=0.380 Sum_probs=378.4
Q ss_pred hHHHHHHhhCCCCCCCEEEEECCCCCCcHHHHHHHHHHcCCeeccCCCCCCHHHHHHHHhhcCCeEEEEcCCCcccCCC-
Q 011116 18 TLSHALSKRDSLCRKTTSLTSSPLPPSTSPVLYFSLLSLGVVISPANPLSSTSEVSHQIQLSKPSIAFATSHTSYKLPS- 96 (493)
Q Consensus 18 ~lA~~L~~~~gl~~gd~V~l~~~~~~~~~~~~~lA~~~~G~~~v~i~~~~~~~~l~~~l~~~~~~~il~~~~~~~~~~~- 96 (493)
++|++|+...|+++||+|+++++ |+++++++++||+++|+++++++|..+.+++.++++.++++++++++.....+.+
T Consensus 50 ~la~~L~~~~g~~~gd~V~~~~~-n~~e~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~~i~~~~~~~~~~~~ 128 (576)
T PRK05620 50 ALAHALHDELGITGDQRVGSMMY-NCAEHLEVLFAVACMGAVFNPLNKQLMNDQIVHIINHAEDEVIVADPRLAEQLGEI 128 (576)
T ss_pred HHHHHHHHhcCCCCCCEEEEEeC-CCHHHHHHHHHHHhcCCEEeecccccCHHHHHHHHhccCCcEEEEChhhHHHHHHH
Confidence 35999943489999999999999 9999999999999999999999999999999999999999999998765543321
Q ss_pred -----CCc-EEEecCc----------------hhhhhhccCcccccccCCCCCCCCCCeEEEEccCCCCCCccceecchH
Q 011116 97 -----NLR-TILMDSP----------------EFISLLNQNEDVADFANSNMTVYQSDPAAILYSSGTTGKVKGVLLSHL 154 (493)
Q Consensus 97 -----~~~-~~~~~~~----------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~TSGTTG~pK~v~~t~~ 154 (493)
..+ ++.++.. .|.++..... . ........++++++++|||||||.||+|.++|.
T Consensus 129 ~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~---~-~~~~~~~~~~~~a~i~~TSGTTG~PKgv~~s~~ 204 (576)
T PRK05620 129 LKECPCVRAVVFIGPSDADSAAAHMPEGIKVYSYEALLDGRS---T-VYDWPELDETTAAAICYSTGTTGAPKGVVYSHR 204 (576)
T ss_pred HhhCccccEEEEecCcccccchhccccccccccHHHHhhcCC---C-cCCCCCCCccceeEEEECCCCCCCCceEEEEcH
Confidence 111 2222211 1333332211 0 111223567899999999999999999999999
Q ss_pred HHHHHHHHhh--hhcccCCCCCCCCCCcEEEEecChhHHHHHHHHHHHHhcCCeEEEec-CCCHHHHHHHHHhcCeeecc
Q 011116 155 NVIAIIAGYY--HVTEETDPNEGPPPHPVSFFTLPMFHVFGFFMLVRAASKGETLVFME-RFDFEKMLKAVENYRVTYMP 231 (493)
Q Consensus 155 ~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~pl~~~~g~~~~~~~l~~G~~~~~~~-~~~~~~~~~~l~~~~~t~l~ 231 (493)
++........ ..+ ++.+++++++.+|++|.+++...+.++..|+++++.. .+++..+++.++++++++++
T Consensus 205 ~l~~~~~~~~~~~~~-------~~~~~~~~l~~~pl~h~~g~~~~~~~l~~g~~~~~~~~~~~~~~~~~~i~~~~~t~~~ 277 (576)
T PRK05620 205 SLYLQSLSLRTTDSL-------AVTHGESFLCCVPIYHVLSWGVPLAAFMSGTPLVFPGPDLSAPTLAKIIATAMPRVAH 277 (576)
T ss_pred HHHHHHHHhhhhhhc-------CCCCCCeEEEeCChHHhhhhHHHHHHHhcCceEEecCCCCCHHHHHHHHHHhcCceee
Confidence 9865443321 122 3478999999999999999988888999999998874 57899999999999999999
Q ss_pred cChHHHHHHHhcccCCCCCCCCeeEEEecCCCCCHHHHHHHHHhCCCCceeccccccccCCccccccCCCC------CCC
Q 011116 232 VSPPLIVAFINSKLTDKYDLSSLQLLGCGGAPLGKEVTLKFKEKFPNVEIRQGYGLTETGGAGSRVIGPDE------AER 305 (493)
Q Consensus 232 ~~P~~~~~l~~~~~~~~~~l~~lr~v~~~Ge~~~~~~~~~~~~~~~~~~v~~~yG~tE~g~~~~~~~~~~~------~~~ 305 (493)
++|+++..++...........++|.++++|+++++++.++|++.+ ++++++.||+||++..+........ ...
T Consensus 278 ~~P~~~~~l~~~~~~~~~~~~~l~~~~~gG~~~~~~~~~~~~~~~-~~~~~~~YG~tE~~~~~~~~~~~~~~~~~~~~~~ 356 (576)
T PRK05620 278 GVPTLWIQLMVHYLKNPPERMSLQEIYVGGSAVPPILIKAWEERY-GVDVVHVWGMTETSPVGTVARPPSGVSGEARWAY 356 (576)
T ss_pred ecCHHHHHHHHHhhccCcccCceeEEEEcCCCCCHHHHHHHHHHh-CCceeeeccccccccceeeeccCCcccccccccc
Confidence 999999988775443333456899999999999999999999988 8899999999999876544222110 112
Q ss_pred CCccccccCCceEEEEcCCCCccCC--CCCceEEEEeCccccccccCCcccc----------------cccccCCCeeec
Q 011116 306 HGSVGRLAELMEAKIVDPATGEALP--PGQKGELWLRGPTIMKGYVGDDKAT----------------SETVHSEGWLKT 367 (493)
Q Consensus 306 ~~~~g~p~~~~~~~i~d~~~~~~~~--~g~~Gel~v~~~~~~~gy~~~~~~~----------------~~~~~~~~~~~T 367 (493)
..+.|++.++++++++| + ++.++ ++..|||+++|+.++.||+++++.+ .+.+..+|||+|
T Consensus 357 ~~~~G~~~~~~~~~i~~-~-g~~~~~~~~~~Gel~v~g~~~~~gY~~~~~~t~~~~~~~f~~~~~~~~~~~~~~~g~~~T 434 (576)
T PRK05620 357 RVSQGRFPASLEYRIVN-D-GQVMESTDRNEGEIQVRGNWVTASYYHSPTEEGGGAASTFRGEDVEDANDRFTADGWLRT 434 (576)
T ss_pred ccccCCcCCceeEEEec-C-CccccCCCCCceEEEEEcCcccccccCCccccccccccccccccchhhhcccccCCcEec
Confidence 34788999999999998 4 66554 4688999999999999999998877 223445789999
Q ss_pred cceEEEcCCCcEEEEcccCCeEEeCceeeChHHHHHHHhcCCCcceEEEEeeeCCCCCeeEEEEEEeCCCCC---CCHHH
Q 011116 368 GDLCYFDSNGFLFIVDRLKELIKYKAYQVPPVELEHLLHSNPEIADAAVIPYPDEEAGQIPMAFVVRKPGSN---ITEAE 444 (493)
Q Consensus 368 gD~~~~~~~g~~~~~GR~~d~i~~~G~~i~~~~ie~~l~~~~~v~~~~v~~~~~~~~~~~~~~~v~~~~~~~---~~~~~ 444 (493)
||++++++||.+++.||.+|+|+.+|.+|++.+||++|.++|.|.+++|++.+++..++.+++++++.++.. .+.++
T Consensus 435 GD~~~~~~dg~l~~~GR~~d~i~~~G~~i~~~eIE~~l~~~p~v~~~~vv~~~~~~~g~~~~a~v~~~~~~~~~~~~~~~ 514 (576)
T PRK05620 435 GDVGSVTRDGFLTIHDRARDVIRSGGEWIYSAQLENYIMAAPEVVECAVIGYPDDKWGERPLAVTVLAPGIEPTRETAER 514 (576)
T ss_pred CceEEEcCCceEEEEechhhhhhcCCEEEcHHHHHHHHhcCCCceEEEEEeccCCCcCceeEEEEEecCCCCcccccHHH
Confidence 999999999999999999999999999999999999999999999999999999888888888888876643 35689
Q ss_pred HHHHHHhcCCCCCCcceEEEeccccCCCCCccchHHHHHHHhhCCCC
Q 011116 445 IMDFIAKQVAPYKKIRRVAFINSIPKSTAGKILRRELVTHAISGNLS 491 (493)
Q Consensus 445 l~~~l~~~l~~~~~p~~~~~~~~lP~t~~GK~~r~~l~~~~~~~~~~ 491 (493)
++++++++|+++++|+.+.+++++|+|++||++|+.|++++.+++++
T Consensus 515 l~~~l~~~L~~~~~P~~i~~v~~~P~t~~GKv~r~~L~~~~~~~~~~ 561 (576)
T PRK05620 515 LRDQLRDRLPNWMLPEYWTFVDEIDKTSVGKFDKKDLRQHLADGDFE 561 (576)
T ss_pred HHHHHHhhCccccCCeEEEEeccCCCCCcccCcHHHHHHHHhcCCcc
Confidence 99999999999999999999999999999999999999999987765
No 64
>PRK10946 entE enterobactin synthase subunit E; Provisional
Probab=100.00 E-value=6.8e-61 Score=491.89 Aligned_cols=453 Identities=23% Similarity=0.352 Sum_probs=383.0
Q ss_pred hHHHHHHhhCCCCCCCEEEEECCCCCCcHHHHHHHHHHcCCeeccCCCCCCHHHHHHHHhhcCCeEEEEcCCCcc-----
Q 011116 18 TLSHALSKRDSLCRKTTSLTSSPLPPSTSPVLYFSLLSLGVVISPANPLSSTSEVSHQIQLSKPSIAFATSHTSY----- 92 (493)
Q Consensus 18 ~lA~~L~~~~gl~~gd~V~l~~~~~~~~~~~~~lA~~~~G~~~v~i~~~~~~~~l~~~l~~~~~~~il~~~~~~~----- 92 (493)
++|++| .+.|+++|++|+++++ |+++++++++||+++|++++++.+.....++..+++.++++.++++.....
T Consensus 60 ~la~~L-~~~g~~~g~~V~v~~~-n~~~~~~~~la~~~~G~v~v~~~~~~~~~~~~~~~~~~~~~~li~~~~~~~~~~~~ 137 (536)
T PRK10946 60 NLACSL-RRQGIKPGDTALVQLG-NVAEFYITFFALLKLGVAPVNALFSHQRSELNAYASQIEPALLIADRQHALFSDDD 137 (536)
T ss_pred HHHHHH-HHcCCCCCCEEEEECC-ChHHHHHHHHHHHHcCeEEecCCccccHHHHHHHHhhcCCCEEEEeccccccchHH
Confidence 459999 7789999999999999 999999999999999999888777777888999999999999999864311
Q ss_pred ---cCCC---CCcEEEecCc----hhhhhhccCcccccccCCCCCCCCCCeEEEEccCCCCCCccceecchHHHHHHHHH
Q 011116 93 ---KLPS---NLRTILMDSP----EFISLLNQNEDVADFANSNMTVYQSDPAAILYSSGTTGKVKGVLLSHLNVIAIIAG 162 (493)
Q Consensus 93 ---~~~~---~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~TSGTTG~pK~v~~t~~~~~~~~~~ 162 (493)
.+.+ ....+.+... .+...+.... . ........++++++++|||||||.||+|.++|.++...+..
T Consensus 138 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~-~~~~~~~~~~~~a~i~~TSGTTG~PKgV~~s~~~l~~~~~~ 213 (536)
T PRK10946 138 FLNTLVAEHSSLRVVLLLNDDGEHSLDDAINHPA---E-DFTATPSPADEVAFFQLSGGSTGTPKLIPRTHNDYYYSVRR 213 (536)
T ss_pred HHHHHHhhCCCceEEEEecCCCCccHHHHhhCcc---c-ccccCCCCCCCeEEEEeCCCCCCCCcEEEEehHHHHHHHHH
Confidence 1111 2222222211 2333333221 1 11123456789999999999999999999999999998887
Q ss_pred hhhhcccCCCCCCCCCCcEEEEecChhHHHHHH--HHHHHHhcCCeEEEecCCCHHHHHHHHHhcCeeecccChHHHHHH
Q 011116 163 YYHVTEETDPNEGPPPHPVSFFTLPMFHVFGFF--MLVRAASKGETLVFMERFDFEKMLKAVENYRVTYMPVSPPLIVAF 240 (493)
Q Consensus 163 ~~~~~~~~~~~~~~~~~~~~~~~~pl~~~~g~~--~~~~~l~~G~~~~~~~~~~~~~~~~~l~~~~~t~l~~~P~~~~~l 240 (493)
....+. +.+++++++.+|++|.+++. .++.++..|+++++.+..++..+++++++++++++.++|.++..+
T Consensus 214 ~~~~~~-------~~~~~~~l~~~p~~h~~~~~~~~~~~~l~~g~~~~~~~~~~~~~~~~~l~~~~~t~~~~~p~~~~~l 286 (536)
T PRK10946 214 SVEICG-------FTPQTRYLCALPAAHNYPMSSPGALGVFLAGGTVVLAPDPSATLCFPLIEKHQVNVTALVPPAVSLW 286 (536)
T ss_pred HHHhcC-------CCCCceEEEecCccccccchhhhHHHHhhcCcEEEECCCCCHHHHHHHHHHhCCcEEEeChHHHHHH
Confidence 666653 47889999999999988873 578899999999998888899999999999999999999999999
Q ss_pred Hhcc--cCCCCCCCCeeEEEecCCCCCHHHHHHHHHhCCCCceeccccccccCCccccccCCCCCCCCCcccccc-CCce
Q 011116 241 INSK--LTDKYDLSSLQLLGCGGAPLGKEVTLKFKEKFPNVEIRQGYGLTETGGAGSRVIGPDEAERHGSVGRLA-ELME 317 (493)
Q Consensus 241 ~~~~--~~~~~~l~~lr~v~~~Ge~~~~~~~~~~~~~~~~~~v~~~yG~tE~g~~~~~~~~~~~~~~~~~~g~p~-~~~~ 317 (493)
++.. ......++++|.+++||+++++++.+++.+.+ ++++++.||+||++..... ..........++|+|+ +++.
T Consensus 287 ~~~~~~~~~~~~~~~l~~v~~gg~~l~~~~~~~~~~~~-g~~~~~~YG~tE~~~~~~~-~~~~~~~~~~~~G~p~~~~~~ 364 (536)
T PRK10946 287 LQAIAEGGSRAQLASLKLLQVGGARLSETLARRIPAEL-GCQLQQVFGMAEGLVNYTR-LDDSDERIFTTQGRPMSPDDE 364 (536)
T ss_pred HhhhcccCccccccceeEEEECCCCCCHHHHHHHHHhc-CCeEEEeecccccceeeec-CCCccccccccCCcccCCCce
Confidence 8763 22334567899999999999999999999998 8999999999997543322 1222233457899998 7999
Q ss_pred EEEEcCCCCccCCCCCceEEEEeCccccccccCCcccccccccCCCeeeccceEEEcCCCcEEEEcccCCeEEeCceeeC
Q 011116 318 AKIVDPATGEALPPGQKGELWLRGPTIMKGYVGDDKATSETVHSEGWLKTGDLCYFDSNGFLFIVDRLKELIKYKAYQVP 397 (493)
Q Consensus 318 ~~i~d~~~~~~~~~g~~Gel~v~~~~~~~gy~~~~~~~~~~~~~~~~~~TgD~~~~~~~g~~~~~GR~~d~i~~~G~~i~ 397 (493)
++++| +++++++.|+.|||+++|+.++.||+++++.+.+.|+.++||+|||+++++++|.+++.||.+|+++.+|.+++
T Consensus 365 v~i~d-~~~~~~~~g~~Gel~v~g~~~~~GY~~~~~~t~~~~~~d~~~~TGDl~~~d~~G~l~~~gR~~d~i~~~G~~v~ 443 (536)
T PRK10946 365 VWVAD-ADGNPLPQGEVGRLMTRGPYTFRGYYKSPQHNASAFDANGFYCSGDLVSIDPDGYITVVGREKDQINRGGEKIA 443 (536)
T ss_pred EEEEC-CCCCCCCCCCccEEEEecCccchhhcCCcccchhhcccCCceecCceEEECCCCcEEEeccccceeecCCEEEc
Confidence 99999 67899999999999999999999999999999998988999999999999999999999999999999999999
Q ss_pred hHHHHHHHhcCCCcceEEEEeeeCCCCCeeEEEEEEeCCCCCCCHHHHHHHHHhc-CCCCCCcceEEEeccccCCCCCcc
Q 011116 398 PVELEHLLHSNPEIADAAVIPYPDEEAGQIPMAFVVRKPGSNITEAEIMDFIAKQ-VAPYKKIRRVAFINSIPKSTAGKI 476 (493)
Q Consensus 398 ~~~ie~~l~~~~~v~~~~v~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~l~~~-l~~~~~p~~~~~~~~lP~t~~GK~ 476 (493)
+.+||..|.++|+|.++++++.+++..++.+++++++.+. .+..+++++++++ +++|++|..+.+++++|+|++||+
T Consensus 444 ~~eiE~~l~~~~~v~~~~v~~~~~~~~g~~~~a~vv~~~~--~~~~~l~~~~~~~~l~~~~~P~~~~~~~~iP~t~~GKv 521 (536)
T PRK10946 444 AEEIENLLLRHPAVIHAALVSMEDELMGEKSCAFLVVKEP--LKAVQLRRFLREQGIAEFKLPDRVECVDSLPLTAVGKV 521 (536)
T ss_pred HHHHHHHHHhCCCcceEEEEcCCCcccCceEEEEEEeCCC--CCHHHHHHHHHhCCccccccCcEEEEeccCCCCCCCcc
Confidence 9999999999999999999999988788888999887654 7788999999876 999999999999999999999999
Q ss_pred chHHHHHHHhhC
Q 011116 477 LRRELVTHAISG 488 (493)
Q Consensus 477 ~r~~l~~~~~~~ 488 (493)
+|+.|++++.+.
T Consensus 522 ~r~~L~~~~~~~ 533 (536)
T PRK10946 522 DKKQLRQWLASR 533 (536)
T ss_pred cHHHHHHHHHhh
Confidence 999999987653
No 65
>PLN02861 long-chain-fatty-acid-CoA ligase
Probab=100.00 E-value=4.7e-62 Score=509.48 Aligned_cols=454 Identities=24% Similarity=0.298 Sum_probs=353.9
Q ss_pred HHHHHHhhCCCCCCCEEEEECCCCCCcHHHHHHHHHHcCCeeccCCCCCCHHHHHHHHhhcCCeEEEEcCCCcccCC---
Q 011116 19 LSHALSKRDSLCRKTTSLTSSPLPPSTSPVLYFSLLSLGVVISPANPLSSTSEVSHQIQLSKPSIAFATSHTSYKLP--- 95 (493)
Q Consensus 19 lA~~L~~~~gl~~gd~V~l~~~~~~~~~~~~~lA~~~~G~~~v~i~~~~~~~~l~~~l~~~~~~~il~~~~~~~~~~--- 95 (493)
+|++| .+.|+++||+|+++++ |+++|+++++||+++|++++|+++.++.+++.+++++++++++|++.+....+.
T Consensus 90 lA~~L-~~~Gv~~gd~Vai~~~-n~~e~~~~~lA~~~~G~v~vpl~~~~~~~~l~~il~~s~~~~v~~~~~~~~~~~~~~ 167 (660)
T PLN02861 90 IGSAI-RSRGVNPGDRCGIYGS-NCPEWIIAMEACNSQGITYVPLYDTLGANAVEFIINHAEVSIAFVQESKISSILSCL 167 (660)
T ss_pred HHHHH-HHcCCCCCCEEEEEcC-CCHHHHHHHHHHHHcCCeEEEecCCCCHHHHHHHHHcCCCCEEEECHHHHHHHHHhh
Confidence 59999 8889999999999999 999999999999999999999999999999999999999999999765433221
Q ss_pred ----CCCc-EEEecCc----------------hhhhhhccCcccccccCCCCCCCCCCeEEEEccCCCCCCccceecchH
Q 011116 96 ----SNLR-TILMDSP----------------EFISLLNQNEDVADFANSNMTVYQSDPAAILYSSGTTGKVKGVLLSHL 154 (493)
Q Consensus 96 ----~~~~-~~~~~~~----------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~TSGTTG~pK~v~~t~~ 154 (493)
..++ ++.++.. +|.++..... . ........++++++|+|||||||.||||+++|.
T Consensus 168 ~~~~~~l~~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~-~~~~~~~~~dd~a~i~yTSGTTG~PKGV~lth~ 243 (660)
T PLN02861 168 PKCSSNLKTIVSFGDVSSEQKEEAEELGVSCFSWEEFSLMGS---L-DCELPPKQKTDICTIMYTSGTTGEPKGVILTNR 243 (660)
T ss_pred hhCCCCCEEEEEECCCChhhhhhhhcCCcEEEEHHHHHHhCc---c-cCCCCccCCCceEEEEecCCCCCCCCEEEEecH
Confidence 1122 3333221 1322222111 0 111223467999999999999999999999999
Q ss_pred HHHHHHHHhhhhcccCCCCCCCCCCcEEEEecChhHHHHHHHHHHHHhcCCeEEEecCCCHHHHHHHHHhcCeeecccCh
Q 011116 155 NVIAIIAGYYHVTEETDPNEGPPPHPVSFFTLPMFHVFGFFMLVRAASKGETLVFMERFDFEKMLKAVENYRVTYMPVSP 234 (493)
Q Consensus 155 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pl~~~~g~~~~~~~l~~G~~~~~~~~~~~~~~~~~l~~~~~t~l~~~P 234 (493)
++...+......+.... ....++|++++.+|++|.++....+.+++.|+++++.. .++..+++.+++++||+++++|
T Consensus 244 ~l~~~~~~~~~~~~~~~--~~~~~~d~~l~~lPl~H~~~~~~~~~~l~~G~~v~~~~-~~~~~~~~~i~~~~~T~~~~vP 320 (660)
T PLN02861 244 AIIAEVLSTDHLLKVTD--RVATEEDSYFSYLPLAHVYDQVIETYCISKGASIGFWQ-GDIRYLMEDVQALKPTIFCGVP 320 (660)
T ss_pred HHHHHHHHHHhcccccc--ccCCCCCEEEEECcHHHHHHHHHHHHHHHhCCEEEEeC-CCHHHHHHHHHHhCCcEEeech
Confidence 99887766544332100 11367899999999999999866666899999998874 5789999999999999999999
Q ss_pred HHHHHHHhccc------------------------------C---CC-----------CCC-CCeeEEEecCCCCCHHHH
Q 011116 235 PLIVAFINSKL------------------------------T---DK-----------YDL-SSLQLLGCGGAPLGKEVT 269 (493)
Q Consensus 235 ~~~~~l~~~~~------------------------------~---~~-----------~~l-~~lr~v~~~Ge~~~~~~~ 269 (493)
.++..+.+... . .. ..+ .++|.+++||+++++++.
T Consensus 321 ~~~~~l~~~~~~~~~~~~~~~~~l~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~lg~~lr~~~~Ggapl~~~~~ 400 (660)
T PLN02861 321 RVYDRIYTGIMQKISSGGMLRKKLFDFAYNYKLGNLRKGLKQEEASPRLDRLVFDKIKEGLGGRVRLLLSGAAPLPRHVE 400 (660)
T ss_pred HHHHHHHHHHHHHHhccCHHHHHHHHHHHHHHHHHHhcCCCCcCccHhHHHHHHHHHHHHhCCcEEEEEECCCCCCHHHH
Confidence 99988864100 0 00 001 479999999999999986
Q ss_pred HHHHHhCCCCceeccccccccCCccccccCCCCCCCCCccccccCCceEEEEcC-CCC-ccCCCCCceEEEEeCcccccc
Q 011116 270 LKFKEKFPNVEIRQGYGLTETGGAGSRVIGPDEAERHGSVGRLAELMEAKIVDP-ATG-EALPPGQKGELWLRGPTIMKG 347 (493)
Q Consensus 270 ~~~~~~~~~~~v~~~yG~tE~g~~~~~~~~~~~~~~~~~~g~p~~~~~~~i~d~-~~~-~~~~~g~~Gel~v~~~~~~~g 347 (493)
+ +.+.++...+++.||+||+++.++... .......+++|+|+++++++|+|. +.+ ...+.+..|||+++||.++.|
T Consensus 401 ~-~~~~~~~~~l~~~YG~TE~~~~~~~~~-~~~~~~~gsvG~p~p~~ev~i~d~~~~g~~~~~~~~~GEi~vrGp~v~~G 478 (660)
T PLN02861 401 E-FLRVTSCSVLSQGYGLTESCGGCFTSI-ANVFSMVGTVGVPMTTIEARLESVPEMGYDALSDVPRGEICLRGNTLFSG 478 (660)
T ss_pred H-HHHHHcCCCeeEecchhhhhhceeecc-cccCCCCCCccCccCceEEEEEEccccCcccCCCCCceeEEEcCCccccc
Confidence 5 555663457999999999976554321 122224678999999999999983 333 344556789999999999999
Q ss_pred ccCCcccccccccCCCeeeccceEEEcCCCcEEEEcccCCeEEe-CceeeChHHHHHHHhcCCCcceEEEEeeeCCCCCe
Q 011116 348 YVGDDKATSETVHSEGWLKTGDLCYFDSNGFLFIVDRLKELIKY-KAYQVPPVELEHLLHSNPEIADAAVIPYPDEEAGQ 426 (493)
Q Consensus 348 y~~~~~~~~~~~~~~~~~~TgD~~~~~~~g~~~~~GR~~d~i~~-~G~~i~~~~ie~~l~~~~~v~~~~v~~~~~~~~~~ 426 (493)
|+++++.+.+.| .+|||+|||+|++|+||++++.||++|+||+ +|++|+|.+||++|.++|.|.+++|++.+ .++
T Consensus 479 Y~~~pe~T~~~f-~dGw~~TGDlg~~d~dG~l~i~GR~kd~Ik~~~G~~I~p~eIE~~l~~~p~V~~a~V~G~~---~~~ 554 (660)
T PLN02861 479 YHKRQDLTEEVL-IDGWFHTGDIGEWQPNGAMKIIDRKKNIFKLSQGEYVAVENLENTYSRCPLIASIWVYGNS---FES 554 (660)
T ss_pred ccCCHHHHHhhh-hccCcccCceEEECCCCcEEEEeccccceEcCCCeEEcHHHHHHHHhcCCCeeEEEEEecC---Ccc
Confidence 999999999998 4899999999999999999999999999997 79999999999999999999999999875 345
Q ss_pred eEEEEEEeCCC--------C--CCCH----------HHHHHHHHh-----cCCCCCCcceEEEec-cc-----cCCCCCc
Q 011116 427 IPMAFVVRKPG--------S--NITE----------AEIMDFIAK-----QVAPYKKIRRVAFIN-SI-----PKSTAGK 475 (493)
Q Consensus 427 ~~~~~v~~~~~--------~--~~~~----------~~l~~~l~~-----~l~~~~~p~~~~~~~-~l-----P~t~~GK 475 (493)
.++++|++.+. . ..+. ..+.+.+++ .++.+.+++++.+++ ++ .+|+++|
T Consensus 555 ~~~A~vv~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~e~i~~~~l~~~~ft~~ng~lT~t~K 634 (660)
T PLN02861 555 FLVAVVVPDRQALEDWAANNNKTGDFKSLCKNLKARKYILDELNSTGKKLQLRGFEMLKAIHLEPNPFDIERDLITPTFK 634 (660)
T ss_pred eeEEEEEcCHHHHHHHHHHcCCCCCHHHHhcCHHHHHHHHHHHHHHHHHcCCCCcceeeEEEEeCCCCCcccCcCCHHHh
Confidence 78888887532 0 0111 224444443 488999999998865 55 7999999
Q ss_pred cchHHHHHHHhh
Q 011116 476 ILRRELVTHAIS 487 (493)
Q Consensus 476 ~~r~~l~~~~~~ 487 (493)
+.|+.+++.+.+
T Consensus 635 ~~R~~i~~~y~~ 646 (660)
T PLN02861 635 LKRPQLLKYYKD 646 (660)
T ss_pred hhHHHHHHHHHH
Confidence 999999988865
No 66
>PRK06164 acyl-CoA synthetase; Validated
Probab=100.00 E-value=9.6e-61 Score=492.10 Aligned_cols=458 Identities=24% Similarity=0.349 Sum_probs=379.1
Q ss_pred hHHHHHHhhCCCCCCCEEEEECCCCCCcHHHHHHHHHHcCCeeccCCCCCCHHHHHHHHhhcCCeEEEEcCCCccc----
Q 011116 18 TLSHALSKRDSLCRKTTSLTSSPLPPSTSPVLYFSLLSLGVVISPANPLSSTSEVSHQIQLSKPSIAFATSHTSYK---- 93 (493)
Q Consensus 18 ~lA~~L~~~~gl~~gd~V~l~~~~~~~~~~~~~lA~~~~G~~~v~i~~~~~~~~l~~~l~~~~~~~il~~~~~~~~---- 93 (493)
++|++| .+.|+++||+|+++++ |+++++++++||+++|++++|+++..+.+++.++++.+++++++++++....
T Consensus 47 ~~a~~L-~~~g~~~g~~V~i~~~-n~~~~~~~~la~~~~G~~~v~l~~~~~~~~l~~~i~~~~~~~ii~~~~~~~~~~~~ 124 (540)
T PRK06164 47 RLAAWL-AAQGVRRGDRVAVWLP-NCIEWVVLFLACARLGATVIAVNTRYRSHEVAHILGRGRARWLVVWPGFKGIDFAA 124 (540)
T ss_pred HHHHHH-HHhCCCCCCEEEEEcC-CcHHHHHHHHHHHHhCcEEEecCCCCCcHHHHHHHHhcCccEEEEccccccccHHH
Confidence 459999 7789999999999999 9999999999999999999999999999999999999999999998764210
Q ss_pred -C---C----CCC-cEEEecCch----------hhhhhccCcccccccCCCCCCCCCCeEEEEccCCCCCCccceecchH
Q 011116 94 -L---P----SNL-RTILMDSPE----------FISLLNQNEDVADFANSNMTVYQSDPAAILYSSGTTGKVKGVLLSHL 154 (493)
Q Consensus 94 -~---~----~~~-~~~~~~~~~----------~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~TSGTTG~pK~v~~t~~ 154 (493)
+ . ... .++.++... +......................+++++++|||||||.||+|.++|.
T Consensus 125 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~TSGtTG~pK~v~~s~~ 204 (540)
T PRK06164 125 ILAAVPPDALPPLRAIAVVDDAADATPAPAPGARVQLFALPDPAPPAAAGERAADPDAGALLFTTSGTTSGPKLVLHRQA 204 (540)
T ss_pred HhhcccccccCCcceEEEeccCcccCCCCCcccccccccccccCCcccccccCCCCCceEEEEECCCCCCCCcEEEEehH
Confidence 1 0 011 122222100 00000000000000001122346889999999999999999999999
Q ss_pred HHHHHHHHhhhhcccCCCCCCCCCCcEEEEecChhHHHHHHHHHHHHhcCCeEEEecCCCHHHHHHHHHhcCeeecccCh
Q 011116 155 NVIAIIAGYYHVTEETDPNEGPPPHPVSFFTLPMFHVFGFFMLVRAASKGETLVFMERFDFEKMLKAVENYRVTYMPVSP 234 (493)
Q Consensus 155 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pl~~~~g~~~~~~~l~~G~~~~~~~~~~~~~~~~~l~~~~~t~l~~~P 234 (493)
++..+.......+. +.+++++++.+|++|.+|+..++.++..|+++++.+.+++..+++.++++++|+++++|
T Consensus 205 ~l~~~~~~~~~~~~-------~~~~~~~l~~~p~~~~~g~~~~~~~l~~G~~~~~~~~~~~~~~~~~l~~~~~t~~~~~p 277 (540)
T PRK06164 205 TLLRHARAIARAYG-------YDPGAVLLAALPFCGVFGFSTLLGALAGGAPLVCEPVFDAARTARALRRHRVTHTFGND 277 (540)
T ss_pred HHHHHHHHHHHhcC-------CCCCCEEEEcCCchhHHHHHHHHHHHhcCceEEecCCCCHHHHHHHHHHhCCeeecCCH
Confidence 99988887777764 37889999999999999998899999999999999888999999999999999999999
Q ss_pred HHHHHHHhcccCCCCCCCCeeEEEecC-CCCCHHHHHHHHHhCCCCceeccccccccCCccccccCCC-CCCCCCccccc
Q 011116 235 PLIVAFINSKLTDKYDLSSLQLLGCGG-APLGKEVTLKFKEKFPNVEIRQGYGLTETGGAGSRVIGPD-EAERHGSVGRL 312 (493)
Q Consensus 235 ~~~~~l~~~~~~~~~~l~~lr~v~~~G-e~~~~~~~~~~~~~~~~~~v~~~yG~tE~g~~~~~~~~~~-~~~~~~~~g~p 312 (493)
+++..|++.. .....++++|.+.++| .+...++.+++.+. ++++++.||+||++.......... ........|.|
T Consensus 278 ~~l~~l~~~~-~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~YG~tE~~~~~~~~~~~~~~~~~~~~~g~~ 354 (540)
T PRK06164 278 EMLRRILDTA-GERADFPSARLFGFASFAPALGELAALARAR--GVPLTGLYGSSEVQALVALQPATDPVSVRIEGGGRP 354 (540)
T ss_pred HHHHHHHHhh-cccCCCcceeeeeeccCCcchHHHHHHHhhc--CCceecceeeccccceeeccCCCCCCcceeccCccc
Confidence 9999998872 3345678898887766 55566777777765 789999999999987654422111 12233456777
Q ss_pred c-CCceEEEEcCCCCccCCCCCceEEEEeCccccccccCCcccccccccCCCeeeccceEEEcCCCcEEEEcccCCeEEe
Q 011116 313 A-ELMEAKIVDPATGEALPPGQKGELWLRGPTIMKGYVGDDKATSETVHSEGWLKTGDLCYFDSNGFLFIVDRLKELIKY 391 (493)
Q Consensus 313 ~-~~~~~~i~d~~~~~~~~~g~~Gel~v~~~~~~~gy~~~~~~~~~~~~~~~~~~TgD~~~~~~~g~~~~~GR~~d~i~~ 391 (493)
. +++.++|+|++++++++.|+.|||+++|+.++.||+++++.+.+.|..++||+|||+|+++++|.+++.||.+|+||+
T Consensus 355 ~~~~~~~~i~d~~~~~~~~~g~~Gel~v~g~~~~~gY~~~~~~t~~~~~~~~~~~TGDl~~~~~~g~l~~~GR~~~~i~~ 434 (540)
T PRK06164 355 ASPEARVRARDPQDGALLPDGESGEIEIRAPSLMRGYLDNPDATARALTDDGYFRTGDLGYTRGDGQFVYQTRMGDSLRL 434 (540)
T ss_pred cCCCeEEEEecCCCCcCCCCCCeeEEEEecccccccccCCchhhhhcccCCCceecCCeEEEcCCceEEEEeecCCeEEE
Confidence 5 789999999889999999999999999999999999999999999988899999999999999999999999999999
Q ss_pred CceeeChHHHHHHHhcCCCcceEEEEeeeCCCCCeeEEEEEEeCCCCCCCHHHHHHHHHhcCCCCCCcceEEEeccccCC
Q 011116 392 KAYQVPPVELEHLLHSNPEIADAAVIPYPDEEAGQIPMAFVVRKPGSNITEAEIMDFIAKQVAPYKKIRRVAFINSIPKS 471 (493)
Q Consensus 392 ~G~~i~~~~ie~~l~~~~~v~~~~v~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~l~~~l~~~~~p~~~~~~~~lP~t 471 (493)
+|++|+|.+||++|.++++|.++++++.... .++.+++++++.++...+.+++.++++++++++++|+.+.+++++|+|
T Consensus 435 ~G~~i~p~eIE~~l~~~~~v~~~~v~~~~~~-~~~~~~~~vv~~~~~~~~~~~l~~~~~~~l~~~~~P~~i~~~~~~P~t 513 (540)
T PRK06164 435 GGFLVNPAEIEHALEALPGVAAAQVVGATRD-GKTVPVAFVIPTDGASPDEAGLMAACREALAGFKVPARVQVVEAFPVT 513 (540)
T ss_pred CCEEcCHHHHHHHHHhCCCceeEEEEecCCC-CceeEEEEEEeCCCCCCCHHHHHHHHHhhcccCcCCcEEEEecCCCCC
Confidence 9999999999999999999999999998743 557788999987776778899999999999999999999999999999
Q ss_pred CCC---ccchHHHHHHHhhC
Q 011116 472 TAG---KILRRELVTHAISG 488 (493)
Q Consensus 472 ~~G---K~~r~~l~~~~~~~ 488 (493)
++| |++|+.|++++.+.
T Consensus 514 ~~g~~~Ki~r~~L~~~~~~~ 533 (540)
T PRK06164 514 ESANGAKIQKHRLREMAQAR 533 (540)
T ss_pred CCCccccccHHHHHHHHHHh
Confidence 999 99999999987654
No 67
>PRK08008 caiC putative crotonobetaine/carnitine-CoA ligase; Validated
Probab=100.00 E-value=5e-61 Score=491.76 Aligned_cols=449 Identities=26% Similarity=0.368 Sum_probs=377.0
Q ss_pred hHHHHHHhhCCCCCCCEEEEECCCCCCcHHHHHHHHHHcCCeeccCCCCCCHHHHHHHHhhcCCeEEEEcCCCcccCCC-
Q 011116 18 TLSHALSKRDSLCRKTTSLTSSPLPPSTSPVLYFSLLSLGVVISPANPLSSTSEVSHQIQLSKPSIAFATSHTSYKLPS- 96 (493)
Q Consensus 18 ~lA~~L~~~~gl~~gd~V~l~~~~~~~~~~~~~lA~~~~G~~~v~i~~~~~~~~l~~~l~~~~~~~il~~~~~~~~~~~- 96 (493)
++|++| .+.|+++||+|+++++ |+++++++++||+++|++++++++..+.+++.+++++++++.++++++....+.+
T Consensus 49 ~la~~L-~~~g~~~~~~v~i~~~-n~~~~~~~~la~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~l~~~~~~~~~~~~~ 126 (517)
T PRK08008 49 RTANLF-YSLGIRKGDKVALHLD-NCPEFIFCWFGLAKIGAIMVPINARLLREESAWILQNSQASLLVTSAQFYPMYRQI 126 (517)
T ss_pred HHHHHH-HHcCCCCCCEEEEEcC-CCHHHHHHHHHHHHcCeEEEEcCcccCHHHHHHHHHhcCceEEEEecchhHHHHHH
Confidence 459999 7789999999999999 9999999999999999999999999999999999999999999999875543221
Q ss_pred ------CCcEEE-ecC--------chhhhhhccCcccccccCCCCCCCCCCeEEEEccCCCCCCccceecchHHHHHHHH
Q 011116 97 ------NLRTIL-MDS--------PEFISLLNQNEDVADFANSNMTVYQSDPAAILYSSGTTGKVKGVLLSHLNVIAIIA 161 (493)
Q Consensus 97 ------~~~~~~-~~~--------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~TSGTTG~pK~v~~t~~~~~~~~~ 161 (493)
..+.+. .+. ..+........ ...........+++++++|||||||.||+|.++|.++.....
T Consensus 127 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~a~i~~TSGtTG~PK~v~~t~~~l~~~~~ 203 (517)
T PRK08008 127 QQEDATPLRHICLTRVALPADDGVSSFTQLKAQQP---ATLCYAPPLSTDDTAEILFTSGTTSRPKGVVITHYNLRFAGY 203 (517)
T ss_pred HhhccccCcEEEEecCCCcccccccCHHHHhccCC---ccccccCCCCCCCeEEEEECCCCCCCCcEEEEehHHHHHHHH
Confidence 122222 211 11222222111 001112234568999999999999999999999999976443
Q ss_pred HhhhhcccCCCCCCCCCCcEEEEecChhHHHHH-HHHHHHHhcCCeEEEecCCCHHHHHHHHHhcCeeecccChHHHHHH
Q 011116 162 GYYHVTEETDPNEGPPPHPVSFFTLPMFHVFGF-FMLVRAASKGETLVFMERFDFEKMLKAVENYRVTYMPVSPPLIVAF 240 (493)
Q Consensus 162 ~~~~~~~~~~~~~~~~~~~~~~~~~pl~~~~g~-~~~~~~l~~G~~~~~~~~~~~~~~~~~l~~~~~t~l~~~P~~~~~l 240 (493)
...... .+.+++++++.+|++|..+. ..++.++..|+++++.+.+++..+++.++++++|++.++|++++.+
T Consensus 204 ~~~~~~-------~~~~~~~~~~~~p~~~~~~~~~~~~~~l~~G~~~~~~~~~~~~~~~~~i~~~~~t~~~~~P~~~~~l 276 (517)
T PRK08008 204 YSAWQC-------ALRDDDVYLTVMPAFHIDCQCTAAMAAFSAGATFVLLEKYSARAFWGQVCKYRATITECIPMMIRTL 276 (517)
T ss_pred HHhhhc-------CCCCCCeEEEecCcHHHHHHHHHHHHHHhcCcEEEEccccCHHHHHHHHHHcCCcEEechHHHHHHH
Confidence 222111 24688999999999998776 6788899999999999888999999999999999999999999998
Q ss_pred HhcccCCCCCCCCeeEEEecCCCCCHHHHHHHHHhCCCCceeccccccccCCccccccCCCCCCCCCccccccCCceEEE
Q 011116 241 INSKLTDKYDLSSLQLLGCGGAPLGKEVTLKFKEKFPNVEIRQGYGLTETGGAGSRVIGPDEAERHGSVGRLAELMEAKI 320 (493)
Q Consensus 241 ~~~~~~~~~~l~~lr~v~~~Ge~~~~~~~~~~~~~~~~~~v~~~yG~tE~g~~~~~~~~~~~~~~~~~~g~p~~~~~~~i 320 (493)
+............++.+.++ +.++++....+.+.+ ++++++.||+||++..+.... ........++|.|.++++++|
T Consensus 277 ~~~~~~~~~~~~~l~~~~~~-~~~~~~~~~~~~~~~-~~~~~~~YG~tE~~~~~~~~~-~~~~~~~~~~G~~~~g~~~~i 353 (517)
T PRK08008 277 MVQPPSANDRQHCLREVMFY-LNLSDQEKDAFEERF-GVRLLTSYGMTETIVGIIGDR-PGDKRRWPSIGRPGFCYEAEI 353 (517)
T ss_pred HhCCCccccccccceeeEEe-cCCCHHHHHHHHHHh-CCeEEeeccccccccccccCC-ccccccCCccccCCCCcEEEE
Confidence 87654443445678877765 478899999999988 899999999999986554422 222334568999999999999
Q ss_pred EcCCCCccCCCCCceEEEEeC---ccccccccCCcccccccccCCCeeeccceEEEcCCCcEEEEcccCCeEEeCceeeC
Q 011116 321 VDPATGEALPPGQKGELWLRG---PTIMKGYVGDDKATSETVHSEGWLKTGDLCYFDSNGFLFIVDRLKELIKYKAYQVP 397 (493)
Q Consensus 321 ~d~~~~~~~~~g~~Gel~v~~---~~~~~gy~~~~~~~~~~~~~~~~~~TgD~~~~~~~g~~~~~GR~~d~i~~~G~~i~ 397 (493)
+| +++++++.|+.|||+++| +.++.||+++++.+.+.+..+|||+|||+++++++|.+++.||.+|+||.+|.+|+
T Consensus 354 ~d-~~~~~~~~g~~Gel~v~g~~~~~~~~gy~~~~~~~~~~~~~~g~~~TGDl~~~~~~g~~~~~GR~~d~i~~~G~~i~ 432 (517)
T PRK08008 354 RD-DHNRPLPAGEIGEICIKGVPGKTIFKEYYLDPKATAKVLEADGWLHTGDTGYVDEEGFFYFVDRRCNMIKRGGENVS 432 (517)
T ss_pred EC-CCCCCCCCCCcceEEEeCCCCcchhhhHhCChHHHhhcccCCCCeeccceEEECCCCcEEEeecccceEEeCCEEEC
Confidence 99 678999999999999998 68999999999999999988999999999999999999999999999999999999
Q ss_pred hHHHHHHHhcCCCcceEEEEeeeCCCCCeeEEEEEEeCCCCCCCHHHHHHHHHhcCCCCCCcceEEEeccccCCCCCccc
Q 011116 398 PVELEHLLHSNPEIADAAVIPYPDEEAGQIPMAFVVRKPGSNITEAEIMDFIAKQVAPYKKIRRVAFINSIPKSTAGKIL 477 (493)
Q Consensus 398 ~~~ie~~l~~~~~v~~~~v~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~l~~~l~~~~~p~~~~~~~~lP~t~~GK~~ 477 (493)
|.+||.++.+++.|.+++|++..++..++.+.+++++.++...+.++++++++++++++++|..+.+++++|+|++||++
T Consensus 433 p~~iE~~l~~~~~v~~~~v~g~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~~~l~~~~~P~~~~~v~~iP~t~~gK~~ 512 (517)
T PRK08008 433 CVELENIIATHPKIQDIVVVGIKDSIRDEAIKAFVVLNEGETLSEEEFFAFCEQNMAKFKVPSYLEIRKDLPRNCSGKII 512 (517)
T ss_pred HHHHHHHHHhCCceeeEEEEccCCCCCCceEEEEEEECCCCCCCHHHHHHHHHhhcccccCCcEEEEeccCCCCCcccee
Confidence 99999999999999999999998887888899999998877778899999999999999999999999999999999999
Q ss_pred hHHHH
Q 011116 478 RRELV 482 (493)
Q Consensus 478 r~~l~ 482 (493)
|+.||
T Consensus 513 r~~l~ 517 (517)
T PRK08008 513 KKNLK 517 (517)
T ss_pred hhhcC
Confidence 99874
No 68
>PRK12492 long-chain-fatty-acid--CoA ligase; Provisional
Probab=100.00 E-value=1.3e-60 Score=492.70 Aligned_cols=459 Identities=28% Similarity=0.457 Sum_probs=373.6
Q ss_pred hHHHHHHhh-CCCCCCCEEEEECCCCCCcHHHHHHHHHHcCCeeccCCCCCCHHHHHHHHhhcCCeEEEEcCCCcccCCC
Q 011116 18 TLSHALSKR-DSLCRKTTSLTSSPLPPSTSPVLYFSLLSLGVVISPANPLSSTSEVSHQIQLSKPSIAFATSHTSYKLPS 96 (493)
Q Consensus 18 ~lA~~L~~~-~gl~~gd~V~l~~~~~~~~~~~~~lA~~~~G~~~v~i~~~~~~~~l~~~l~~~~~~~il~~~~~~~~~~~ 96 (493)
++|.+| .+ .|+++||+|+++++ |+++++++++||+++|++++|+++..+.+++.+++++++++++++++.....+..
T Consensus 61 ~~a~~L-~~~~gi~~gd~V~i~~~-n~~e~~~~~la~~~~G~v~v~~~~~~~~~~l~~~l~~~~~~~~i~~~~~~~~~~~ 138 (562)
T PRK12492 61 AFAAYL-QQHTDLVPGDRIAVQMP-NVLQYPIAVFGALRAGLIVVNTNPLYTAREMRHQFKDSGARALVYLNMFGKLVQE 138 (562)
T ss_pred HHHHHH-HHhcCCCCCCEEEEECC-CCHHHHHHHHHHHHcCeEEeccCccCCHHHHHHHHhccCceEEEeccccchHHHH
Confidence 359999 55 59999999999999 9999999999999999999999999999999999999999999997643221110
Q ss_pred -----CCcEE-E--------------ec-----------------CchhhhhhccCcccccccCCCCCCCCCCeEEEEcc
Q 011116 97 -----NLRTI-L--------------MD-----------------SPEFISLLNQNEDVADFANSNMTVYQSDPAAILYS 139 (493)
Q Consensus 97 -----~~~~~-~--------------~~-----------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~T 139 (493)
..... . .. ...|........ ...........+++++++||
T Consensus 139 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~a~i~~T 215 (562)
T PRK12492 139 VLPDTGIEYLIEAKMGDLLPAAKGWLVNTVVDKVKKMVPAYHLPQAVPFKQALRQGR---GLSLKPVPVGLDDIAVLQYT 215 (562)
T ss_pred hhhccCceEEEeechhhccccccchhcccccccccccccccCCcccccHHHHHhccC---CCCCCCCCCCcCCeEEEEeC
Confidence 00000 0 00 001111111100 00111224566899999999
Q ss_pred CCCCCCccceecchHHHHHHHHHhhhhcccCC--CCCCCCC-CcEEEEecChhHHHHH-HHHHHHHhcCCeEEEe-cCCC
Q 011116 140 SGTTGKVKGVLLSHLNVIAIIAGYYHVTEETD--PNEGPPP-HPVSFFTLPMFHVFGF-FMLVRAASKGETLVFM-ERFD 214 (493)
Q Consensus 140 SGTTG~pK~v~~t~~~~~~~~~~~~~~~~~~~--~~~~~~~-~~~~~~~~pl~~~~g~-~~~~~~l~~G~~~~~~-~~~~ 214 (493)
|||||.||+|.++|+++..+.......+.... ....... .++++...|++|.+++ ...+..+..|...++. ...+
T Consensus 216 SGTTG~PKgv~~s~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pl~~~~g~~~~~~~~~~~g~~~~~~~~~~~ 295 (562)
T PRK12492 216 GGTTGLAKGAMLTHGNLVANMLQVRACLSQLGPDGQPLMKEGQEVMIAPLPLYHIYAFTANCMCMMVSGNHNVLITNPRD 295 (562)
T ss_pred CCCCCCCceEEEechhHHHHHHHHHHHHhcccccccccccCCCeEEEEecchHHHHHHHHHHHHHhhcCceEEEecCCcC
Confidence 99999999999999999877665544432100 0000123 3567889999999998 4566667788876665 4568
Q ss_pred HHHHHHHHHhcCeeecccChHHHHHHHhcccCCCCCCCCeeEEEecCCCCCHHHHHHHHHhCCCCceeccccccccCCcc
Q 011116 215 FEKMLKAVENYRVTYMPVSPPLIVAFINSKLTDKYDLSSLQLLGCGGAPLGKEVTLKFKEKFPNVEIRQGYGLTETGGAG 294 (493)
Q Consensus 215 ~~~~~~~l~~~~~t~l~~~P~~~~~l~~~~~~~~~~l~~lr~v~~~Ge~~~~~~~~~~~~~~~~~~v~~~yG~tE~g~~~ 294 (493)
+..+++.++++++|++.++|+++..+++.......+++++|.+++||+++++++.+++.+.+ ++++++.||+||++.++
T Consensus 296 ~~~~~~~i~~~~~t~~~~~p~~~~~l~~~~~~~~~~~~~lr~~~~gG~~~~~~~~~~~~~~~-~~~~~~~YG~tE~~~~~ 374 (562)
T PRK12492 296 IPGFIKELGKWRFSALLGLNTLFVALMDHPGFKDLDFSALKLTNSGGTALVKATAERWEQLT-GCTIVEGYGLTETSPVA 374 (562)
T ss_pred HHHHHHHHHHhCCceeeCcHHHHHHHHhCcCcccccccceeEEEeccccCCHHHHHHHHHHh-CCceeeccCccccCcee
Confidence 89999999999999999999999999887655566678999999999999999999999988 89999999999998766
Q ss_pred ccccCCCCCCCCCccccccCCceEEEEcCCCCccCCCCCceEEEEeCccccccccCCcccccccccCCCeeeccceEEEc
Q 011116 295 SRVIGPDEAERHGSVGRLAELMEAKIVDPATGEALPPGQKGELWLRGPTIMKGYVGDDKATSETVHSEGWLKTGDLCYFD 374 (493)
Q Consensus 295 ~~~~~~~~~~~~~~~g~p~~~~~~~i~d~~~~~~~~~g~~Gel~v~~~~~~~gy~~~~~~~~~~~~~~~~~~TgD~~~~~ 374 (493)
+.+. .......+++|+|+++++++|+| +++.+++.|+.|||+++|+.++.||+++++.+.+.|+.++||+|||+++++
T Consensus 375 ~~~~-~~~~~~~~~~G~p~~~~~v~ivd-~~~~~~~~g~~Gel~v~g~~~~~gY~~~~~~t~~~~~~~g~~~TGD~g~~~ 452 (562)
T PRK12492 375 STNP-YGELARLGTVGIPVPGTALKVID-DDGNELPLGERGELCIKGPQVMKGYWQQPEATAEALDAEGWFKTGDIAVID 452 (562)
T ss_pred eecC-CcccccCCccceecCCCEEEEEC-CCCCCCCCCCceEEEEeCCccccccccCchhhhhcccCCCceecCcEEEEC
Confidence 5422 12223457899999999999999 578899999999999999999999999999998888778999999999999
Q ss_pred CCCcEEEEcccCCeEEeCceeeChHHHHHHHhcCCCcceEEEEeeeCCCCCeeEEEEEEeCCCCCCCHHHHHHHHHhcCC
Q 011116 375 SNGFLFIVDRLKELIKYKAYQVPPVELEHLLHSNPEIADAAVIPYPDEEAGQIPMAFVVRKPGSNITEAEIMDFIAKQVA 454 (493)
Q Consensus 375 ~~g~~~~~GR~~d~i~~~G~~i~~~~ie~~l~~~~~v~~~~v~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~l~~~l~ 454 (493)
++|.+++.||.+|+|+++|.+|+|.+||..|.++|.|.++++++.+++..++.+.+++++.+. ..+.++++++++++++
T Consensus 453 ~~G~l~i~GR~~~~i~~~G~~i~~~eIE~~l~~~~~v~~~~v~~~~~~~~~~~~~~~v~~~~~-~~~~~~i~~~~~~~l~ 531 (562)
T PRK12492 453 PDGFVRIVDRKKDLIIVSGFNVYPNEIEDVVMAHPKVANCAAIGVPDERSGEAVKLFVVARDP-GLSVEELKAYCKENFT 531 (562)
T ss_pred CCCeEEEecccCCeEEECCEEECHHHHHHHHHhCCCeeEEEEEeccCCCCCceEEEEEEeCCC-CCCHHHHHHHHHHhcc
Confidence 999999999999999999999999999999999999999999999888778888888887543 3567899999999999
Q ss_pred CCCCcceEEEeccccCCCCCccchHHHHHHH
Q 011116 455 PYKKIRRVAFINSIPKSTAGKILRRELVTHA 485 (493)
Q Consensus 455 ~~~~p~~~~~~~~lP~t~~GK~~r~~l~~~~ 485 (493)
.+++|..+.+++++|+|++||++|+.|++++
T Consensus 532 ~~~~P~~i~~~~~~P~t~~GK~~r~~L~~~~ 562 (562)
T PRK12492 532 GYKVPKHIVLRDSLPMTPVGKILRRELRDIA 562 (562)
T ss_pred cccCCcEEEEeccCCCCCCCceeHHHHHhhC
Confidence 9999999999999999999999999999764
No 69
>TIGR01734 D-ala-DACP-lig D-alanine--poly(phosphoribitol) ligase, subunit 1. This model represents the enzyme (also called D-alanine-D-alanyl carrier protein ligase) which activates D-alanine as an adenylate via the reaction D-ala + ATP - D-ala-AMP + PPi, and further catalyzes the condensation of the amino acid adenylate with the D-alanyl carrier protein (D-ala-ACP). The D-alanine is then further transferred to teichoic acid in the biosynthesis of lipoteichoic acid (LTA) and wall teichoic acid (WTA) in gram positive bacteria, both polysacchatides.
Probab=100.00 E-value=9.7e-61 Score=488.09 Aligned_cols=451 Identities=20% Similarity=0.275 Sum_probs=377.5
Q ss_pred hHHHHHHhhCCCCCCCEEEEECCCCCCcHHHHHHHHHHcCCeeccCCCCCCHHHHHHHHhhcCCeEEEEcCCCcccCCCC
Q 011116 18 TLSHALSKRDSLCRKTTSLTSSPLPPSTSPVLYFSLLSLGVVISPANPLSSTSEVSHQIQLSKPSIAFATSHTSYKLPSN 97 (493)
Q Consensus 18 ~lA~~L~~~~gl~~gd~V~l~~~~~~~~~~~~~lA~~~~G~~~v~i~~~~~~~~l~~~l~~~~~~~il~~~~~~~~~~~~ 97 (493)
++|..| .+.|+++||+|+++++ |+++++++++||+++|++++|+++.++.+++.++++..+++.++++.+.......
T Consensus 37 ~~a~~L-~~~g~~~~~~V~i~~~-~~~~~~~~~la~~~~G~~~v~~~~~~~~~~~~~~~~~~~~~~ii~~~~~~~~~~~- 113 (502)
T TIGR01734 37 RLAAFI-QKRILPKKSPIIVYGH-MEPHMLVAFLGSIKSGHAYIPVDTSIPSERIEMIIEAAGPELVIHTAELSIDAVG- 113 (502)
T ss_pred HHHHHH-HHhCCCCCCeEEEEeC-CCHHHHHHHHHHHHhCCEEeCCCCcChHHHHHHHHHhcCCCEEEecccccccccC-
Confidence 459999 7789999999999999 9999999999999999999999999999999999999999999998876544332
Q ss_pred CcEEEecCchhhhhhccCcccccccCCCCCCCCCCeEEEEccCCCCCCccceecchHHHHHHHHHhhhhcccCCCCCCCC
Q 011116 98 LRTILMDSPEFISLLNQNEDVADFANSNMTVYQSDPAAILYSSGTTGKVKGVLLSHLNVIAIIAGYYHVTEETDPNEGPP 177 (493)
Q Consensus 98 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~TSGTTG~pK~v~~t~~~~~~~~~~~~~~~~~~~~~~~~~ 177 (493)
...+.++. ........ ..........++++++++|||||||.||+|.++|+++..........+ +..
T Consensus 114 ~~~~~~~~--~~~~~~~~----~~~~~~~~~~~~~~~~il~TSGTTG~PK~v~~s~~~~~~~~~~~~~~~-------~~~ 180 (502)
T TIGR01734 114 TQIITLSA--LEQAETSG----GPVSFDHAVKGDDNYYIIYTSGSTGNPKGVQISHDNLVSFTNWMLADF-------PLS 180 (502)
T ss_pred CceEEchH--hhhhhhhc----CCccccccCCCCCeEEEEECCCCCCCCCEEEEecHHHHHHHHHHHHhC-------CCC
Confidence 22333321 11111111 111112234678899999999999999999999999998877766655 347
Q ss_pred CCcEEEEecChhHHHHHHHHHHHHhcCCeEEEecC---CCHHHHHHHHHhcCeeecccChHHHHHHHhcccCCCCCCCCe
Q 011116 178 PHPVSFFTLPMFHVFGFFMLVRAASKGETLVFMER---FDFEKMLKAVENYRVTYMPVSPPLIVAFINSKLTDKYDLSSL 254 (493)
Q Consensus 178 ~~~~~~~~~pl~~~~g~~~~~~~l~~G~~~~~~~~---~~~~~~~~~l~~~~~t~l~~~P~~~~~l~~~~~~~~~~l~~l 254 (493)
.+++++...|++|..++..++.++..|+++++.+. .++..+++.+.+++++.+.++|+++..++.........++++
T Consensus 181 ~~~~~l~~~p~~~~~~~~~~~~~l~~G~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~p~~~~~~l~~~~~~~~~~~~l 260 (502)
T TIGR01734 181 EGKQFLNQAPFSFDLSVMDLYPCLASGGTLHCLDKDITNNFKLLFEELPKTGLNVWVSTPSFVDMCLLDPNFNQENYPHL 260 (502)
T ss_pred CCceEEeecCceechhHHHHHHHHHCCCEEEEcCHHHhcCHHHHHHHHHHcCCeEEEEChhHHHHHHhccccccccCCcc
Confidence 88999999999999999889999999999998864 478999999999999999999999887776554445567899
Q ss_pred eEEEecCCCCCHHHHHHHHHhCCCCceeccccccccCCccccccCC---CCCCCCCccccccCCceEEEEcCCCCccCCC
Q 011116 255 QLLGCGGAPLGKEVTLKFKEKFPNVEIRQGYGLTETGGAGSRVIGP---DEAERHGSVGRLAELMEAKIVDPATGEALPP 331 (493)
Q Consensus 255 r~v~~~Ge~~~~~~~~~~~~~~~~~~v~~~yG~tE~g~~~~~~~~~---~~~~~~~~~g~p~~~~~~~i~d~~~~~~~~~ 331 (493)
+.++++|+++++++.+++.+.++++.+++.||+||++......... .......++|.|.++++++|+| +++.+++.
T Consensus 261 ~~~~~~G~~~~~~~~~~~~~~~~~~~~~~~yG~tE~~~~~~~~~~~~~~~~~~~~~~vg~~~~~~~~~i~~-~~~~~~~~ 339 (502)
T TIGR01734 261 THFLFCGEELPVKTAKALLERFPKATIYNTYGPTEATVAVTSVKITQEILDQYPRLPIGFAKPDMNLFIMD-EEGEPLPE 339 (502)
T ss_pred cEEEEcCCcCCHHHHHHHHHHCCCcEEEeCccCCcceEEEEEEEccccccccCCccccccccCCCEEEEEC-CCCCCCCC
Confidence 9999999999999999999999899999999999987544332111 1122345799999999999999 56889999
Q ss_pred CCceEEEEeCccccccccCCcccccccc---cCCCeeeccceEEEcCCCcEEEEcccCCeEEeCceeeChHHHHHHHhcC
Q 011116 332 GQKGELWLRGPTIMKGYVGDDKATSETV---HSEGWLKTGDLCYFDSNGFLFIVDRLKELIKYKAYQVPPVELEHLLHSN 408 (493)
Q Consensus 332 g~~Gel~v~~~~~~~gy~~~~~~~~~~~---~~~~~~~TgD~~~~~~~g~~~~~GR~~d~i~~~G~~i~~~~ie~~l~~~ 408 (493)
|+.|||+++|+.++.||+++++.+.+.| ...+||+|||+|+++++ .+++.||.+|+|+++|++|+|.+||+.+.++
T Consensus 340 g~~Gel~v~g~~~~~gy~~~~~~~~~~~~~~~~~~~~~TGDlg~~~~~-~l~i~GR~~d~i~~~G~~v~~~~IE~~l~~~ 418 (502)
T TIGR01734 340 GEKGEIVIVGPSVSKGYLNNPEKTAEAFFSHEGQPAYRTGDAGTITDG-QLFYQGRLDFQIKLHGYRIELEDIEFNLRQS 418 (502)
T ss_pred CCeeEEEEccccccccccCCcccchHhheeCCCcEEEECCCEEEEECC-EEEEeccccCeEEECcEEeCHHHHHHHHHcC
Confidence 9999999999999999999998887765 23469999999999977 9999999999999999999999999999999
Q ss_pred CCcceEEEEeee-CCCCCeeEEEEEEeCCCCCCC----HHHHHHHHHhcCCCCCCcceEEEeccccCCCCCccchHHHHH
Q 011116 409 PEIADAAVIPYP-DEEAGQIPMAFVVRKPGSNIT----EAEIMDFIAKQVAPYKKIRRVAFINSIPKSTAGKILRRELVT 483 (493)
Q Consensus 409 ~~v~~~~v~~~~-~~~~~~~~~~~v~~~~~~~~~----~~~l~~~l~~~l~~~~~p~~~~~~~~lP~t~~GK~~r~~l~~ 483 (493)
|+|.++++++.. .+...+.+++++++....... ..++.+.++++++++.+|+.+++++++|+|++||++|++|++
T Consensus 419 ~~v~~~~vv~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~i~~~~~~~l~~~~~P~~~~~v~~lP~t~~gKv~r~~l~~ 498 (502)
T TIGR01734 419 SYIESAVVVPKYNKDHKVEYLIAAIVPETEDFEKEFQLTKAIKKELKKSLPAYMIPRKFIYRDQLPLTANGKIDRKALAE 498 (502)
T ss_pred CCccEEEEEEEEcCCCCceEEEEEEEecccccccchhhHHHHHHHHhhhChhhcCCcEEEEccccCCCCCCcccHHHHHH
Confidence 999999999875 444567888888876543322 267899999999999999999999999999999999999999
Q ss_pred HHh
Q 011116 484 HAI 486 (493)
Q Consensus 484 ~~~ 486 (493)
++.
T Consensus 499 ~~~ 501 (502)
T TIGR01734 499 EVN 501 (502)
T ss_pred hhc
Confidence 864
No 70
>PRK12467 peptide synthase; Provisional
Probab=100.00 E-value=7.1e-62 Score=583.83 Aligned_cols=451 Identities=19% Similarity=0.267 Sum_probs=390.9
Q ss_pred chhhhHHHHHHhhCCCCCCCEEEEECCCCCCcHHHHHHHHHHcCCeeccCCCCCCHHHHHHHHhhcCCeEEEEcCCCccc
Q 011116 14 SARFTLSHALSKRDSLCRKTTSLTSSPLPPSTSPVLYFSLLSLGVVISPANPLSSTSEVSHQIQLSKPSIAFATSHTSYK 93 (493)
Q Consensus 14 ~~~~~lA~~L~~~~gl~~gd~V~l~~~~~~~~~~~~~lA~~~~G~~~v~i~~~~~~~~l~~~l~~~~~~~il~~~~~~~~ 93 (493)
++++ |++| .+.|+++|++|+++++ ++++++++++||+++|++++|++|.++.+++.++++.+++++++++......
T Consensus 3130 a~~l--A~~L-~~~gv~~g~~V~l~~~-~s~~~vv~~lavl~aGa~~vpld~~~p~~rl~~il~~~~~~~vlt~~~~~~~ 3205 (3956)
T PRK12467 3130 ANRL--AHRL-IAIGVGPDVLVGVAVE-RSVEMIVALLAVLKAGGAYVPLDPEYPRERLAYMIEDSGVKLLLTQAHLLEQ 3205 (3956)
T ss_pred HHHH--HHHH-HHcCCCCCCeEEEEeC-CCHHHHHHHHHHHhhCcEeecCCCCChHHHHHHHHhCCCCcEEEechhhhhh
Confidence 4444 9999 7789999999999999 9999999999999999999999999999999999999999999999877665
Q ss_pred CCC--CCcEEEecCchhhhhhccCcccccccCCCCCCCCCCeEEEEccCCCCCCccceecchHHHHHHHHHhhhhcccCC
Q 011116 94 LPS--NLRTILMDSPEFISLLNQNEDVADFANSNMTVYQSDPAAILYSSGTTGKVKGVLLSHLNVIAIIAGYYHVTEETD 171 (493)
Q Consensus 94 ~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~TSGTTG~pK~v~~t~~~~~~~~~~~~~~~~~~~ 171 (493)
++. ....+.++..... .. ..........+++++|++|||||||.||||+++|+++.+.+......+.
T Consensus 3206 ~~~~~~~~~~~~~~~~~~---~~-----~~~~~~~~~~~~~~a~ii~TSGSTG~PKgV~~~h~~l~~~~~~~~~~~~--- 3274 (3956)
T PRK12467 3206 LPAPAGDTALTLDRLDLN---GY-----SENNPSTRVMGENLAYVIYTSGSTGKPKGVGVRHGALANHLCWIAEAYE--- 3274 (3956)
T ss_pred cccccCCceeeecchhhc---cc-----CCCCCcccCCCCceEEEEEccCCCCCcceeeehhHHHHHHHHHHHHhcC---
Confidence 543 2334444432211 11 1112223456899999999999999999999999999998888777764
Q ss_pred CCCCCCCCcEEEEecChhHHHHHHHHHHHHhcCCeEEEecC--CCHHHHHHHHHhcCeeecccChHHHHHHHhcccCCCC
Q 011116 172 PNEGPPPHPVSFFTLPMFHVFGFFMLVRAASKGETLVFMER--FDFEKMLKAVENYRVTYMPVSPPLIVAFINSKLTDKY 249 (493)
Q Consensus 172 ~~~~~~~~~~~~~~~pl~~~~g~~~~~~~l~~G~~~~~~~~--~~~~~~~~~l~~~~~t~l~~~P~~~~~l~~~~~~~~~ 249 (493)
+.++|+++...|++|..+...++.++..|+++++.+. .+++.+++.++++++|++.++|+++..+++... ..
T Consensus 3275 ----~~~~d~~l~~~~~~fd~~~~~~~~~L~~G~~l~i~~~~~~~~~~l~~~i~~~~vt~~~~~Ps~l~~l~~~~~--~~ 3348 (3956)
T PRK12467 3275 ----LDANDRVLLFMSFSFDGAQERFLWTLICGGCLVVRDNDLWDPEELWQAIHAHRISIACFPPAYLQQFAEDAG--GA 3348 (3956)
T ss_pred ----CCcCCEEEEecCccHhHHHHHHHHHHhCCCEEEECCcccCCHHHHHHHHHHcCCEEEEcCHHHHHHHHhccc--cc
Confidence 4899999999999999999999999999999999865 689999999999999999999999999987542 34
Q ss_pred CCCCeeEEEecCCCCCHHHHHHHHHhCCCCceeccccccccCCccccccCCCC---CCCCCccccccCCceEEEEcCCCC
Q 011116 250 DLSSLQLLGCGGAPLGKEVTLKFKEKFPNVEIRQGYGLTETGGAGSRVIGPDE---AERHGSVGRLAELMEAKIVDPATG 326 (493)
Q Consensus 250 ~l~~lr~v~~~Ge~~~~~~~~~~~~~~~~~~v~~~yG~tE~g~~~~~~~~~~~---~~~~~~~g~p~~~~~~~i~d~~~~ 326 (493)
.++++|.+++|||++++++.++|++.++++.+++.||+||++..++....... .....++|+|++|++++|+| +.+
T Consensus 3349 ~~~~lr~~~~gGe~~~~~~~~~~~~~~~~~~l~n~YG~TE~~~~~~~~~~~~~~~~~~~~~~iG~p~~~~~~~v~d-~~~ 3427 (3956)
T PRK12467 3349 DCASLDIYVFGGEAVPPAAFEQVKRKLKPRGLTNGYGPTEAVVTVTLWKCGGDAVCEAPYAPIGRPVAGRSIYVLD-GQL 3427 (3956)
T ss_pred CCCCceEEEEecCCCCHHHHHHHHHhCCCCEEEeCcccchhEeeeEEEecccccccCCCCCCCccccCCCEEEEEC-CCC
Confidence 57889999999999999999999998888999999999999876554222111 12346799999999999999 779
Q ss_pred ccCCCCCceEEEEeCccccccccCCcccccccccCCC-------eeeccceEEEcCCCcEEEEcccCCeEEeCceeeChH
Q 011116 327 EALPPGQKGELWLRGPTIMKGYVGDDKATSETVHSEG-------WLKTGDLCYFDSNGFLFIVDRLKELIKYKAYQVPPV 399 (493)
Q Consensus 327 ~~~~~g~~Gel~v~~~~~~~gy~~~~~~~~~~~~~~~-------~~~TgD~~~~~~~g~~~~~GR~~d~i~~~G~~i~~~ 399 (493)
++++.|+.|||+|+|+.+++||+++++.|.+.|..++ ||+|||+|++++||.+++.||+|++||++|.+|++.
T Consensus 3428 ~~vp~G~~GEL~i~G~~v~~GY~~~~~~T~~~F~~~p~~~~g~r~yrTGDl~~~~~dG~l~~~GR~d~~iki~G~rIe~~ 3507 (3956)
T PRK12467 3428 NPVPVGVAGELYIGGVGLARGYHQRPSLTAERFVADPFSGSGGRLYRTGDLARYRADGVIEYLGRIDHQVKIRGFRIELG 3507 (3956)
T ss_pred CCCCCCCCceEEEcchhhhhhccCCcccchhhccCCCCCCCCceeeccchhheecCCCcEEEeccccceEeeceEeecHH
Confidence 9999999999999999999999999999999986544 699999999999999999999999999999999999
Q ss_pred HHHHHHhcCCCcceEEEEeeeCCCCCeeEEEEEEeCCCCCCCHHHHHHHHHhcCCCCCCcceEEEeccccCCCCCccchH
Q 011116 400 ELEHLLHSNPEIADAAVIPYPDEEAGQIPMAFVVRKPGSNITEAEIMDFIAKQVAPYKKIRRVAFINSIPKSTAGKILRR 479 (493)
Q Consensus 400 ~ie~~l~~~~~v~~~~v~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~l~~~l~~~~~p~~~~~~~~lP~t~~GK~~r~ 479 (493)
|||++|.++|+|.+++|+.... ..++.+++++++........++++++++++||.|++|..++++++||+|++||++|+
T Consensus 3508 EIE~~l~~~p~V~~a~v~~~~~-~~~~~lva~v~~~~~~~~~~~~l~~~l~~~Lp~y~vP~~~~~l~~lP~t~~GKidR~ 3586 (3956)
T PRK12467 3508 EIEARLLQHPSVREAVVLARDG-AGGKQLVAYVVPADPQGDWRETLRDHLAASLPDYMVPAQLLVLAAMPLGPNGKVDRK 3586 (3956)
T ss_pred HHHHHHhhCcccceEEEEEecC-CCCcEEEEEEeCCCCCcccHHHHHHHHhccCChhhCCCeeeeeccCCCCCCCccchh
Confidence 9999999999999999998754 367789999998776667788999999999999999999999999999999999999
Q ss_pred HHHHHHhh
Q 011116 480 ELVTHAIS 487 (493)
Q Consensus 480 ~l~~~~~~ 487 (493)
.|.+...+
T Consensus 3587 ~L~~~~~~ 3594 (3956)
T PRK12467 3587 ALPDPDAK 3594 (3956)
T ss_pred hcCCCCcc
Confidence 99875443
No 71
>PRK07787 acyl-CoA synthetase; Validated
Probab=100.00 E-value=1.8e-60 Score=481.42 Aligned_cols=429 Identities=27% Similarity=0.404 Sum_probs=365.4
Q ss_pred HHHHHHhhCCCCCCCEEEEECCCCCCcHHHHHHHHHHcCCeeccCCCCCCHHHHHHHHhhcCCeEEEEcCCCcccCCCCC
Q 011116 19 LSHALSKRDSLCRKTTSLTSSPLPPSTSPVLYFSLLSLGVVISPANPLSSTSEVSHQIQLSKPSIAFATSHTSYKLPSNL 98 (493)
Q Consensus 19 lA~~L~~~~gl~~gd~V~l~~~~~~~~~~~~~lA~~~~G~~~v~i~~~~~~~~l~~~l~~~~~~~il~~~~~~~~~~~~~ 98 (493)
+|.+| +++|+|+++++ |+++++++++||+++|++++|+++..+.+++.++++.++++.++++++... ...
T Consensus 38 ~a~~L------~~~~~V~l~~~-~~~~~~~~~la~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~il~~~~~~~---~~~ 107 (471)
T PRK07787 38 VAERV------AGARRVAVLAT-PTLATVLAVVGALIAGVPVVPVPPDSGVAERRHILADSGAQAWLGPAPDDP---AGL 107 (471)
T ss_pred HHHHh------ccCCEEEEECC-CCHHHHHHHHHHHhcCcEEeecCCCCChHHHHHHHHhcCCCEEEecCCccc---ccc
Confidence 36666 36799999999 999999999999999999999999999999999999999999999864211 111
Q ss_pred cEEEecCchhhhhhccCcccccccCCCCCCCCCCeEEEEccCCCCCCccceecchHHHHHHHHHhhhhcccCCCCCCCCC
Q 011116 99 RTILMDSPEFISLLNQNEDVADFANSNMTVYQSDPAAILYSSGTTGKVKGVLLSHLNVIAIIAGYYHVTEETDPNEGPPP 178 (493)
Q Consensus 99 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~TSGTTG~pK~v~~t~~~~~~~~~~~~~~~~~~~~~~~~~~ 178 (493)
....+... .. . ........++++++++|||||||.||+|.++|.++...+......+. +.+
T Consensus 108 ~~~~~~~~-------~~----~-~~~~~~~~~~~~a~i~~TSGTTG~PK~v~~t~~~l~~~~~~~~~~~~-------~~~ 168 (471)
T PRK07787 108 PHVPVRLH-------AR----S-WHRYPEPDPDAPALIVYTSGTTGPPKGVVLSRRAIAADLDALAEAWQ-------WTA 168 (471)
T ss_pred cceeeecc-------cc----c-cccCCCCCCCceEEEEECCCCCCCCCEEEEeHHHHHHHHHHHHHhcC-------CCc
Confidence 11111100 00 0 01111245789999999999999999999999999988877766653 478
Q ss_pred CcEEEEecChhHHHHH-HHHHHHHhcCCeEEEecCCCHHHHHHHHHhcCeeecccChHHHHHHHhcccCCCCCCCCeeEE
Q 011116 179 HPVSFFTLPMFHVFGF-FMLVRAASKGETLVFMERFDFEKMLKAVENYRVTYMPVSPPLIVAFINSKLTDKYDLSSLQLL 257 (493)
Q Consensus 179 ~~~~~~~~pl~~~~g~-~~~~~~l~~G~~~~~~~~~~~~~~~~~l~~~~~t~l~~~P~~~~~l~~~~~~~~~~l~~lr~v 257 (493)
+++++..+|++|..|+ ..++.++..|+++++.+..++..+++.++ ++++++.++|+++..+++.... ...++++|.+
T Consensus 169 ~~~~~~~~p~~~~~g~~~~~~~~l~~G~~~~~~~~~~~~~~~~~i~-~~~t~~~~~P~~~~~l~~~~~~-~~~l~~l~~~ 246 (471)
T PRK07787 169 DDVLVHGLPLFHVHGLVLGVLGPLRIGNRFVHTGRPTPEAYAQALS-EGGTLYFGVPTVWSRIAADPEA-ARALRGARLL 246 (471)
T ss_pred cceeEeccCCeeechhHHHHHHHHhcCCEEEecCCCCHHHHHHHHh-hCceEEEcchHHHHHHHhCccc-cccccceeEE
Confidence 8999999999999998 56889999999999988889999999999 9999999999999999875422 3457889999
Q ss_pred EecCCCCCHHHHHHHHHhCCCCceeccccccccCCccccccCCCCCCCCCccccccCCceEEEEcCCCCccCC-CCC-ce
Q 011116 258 GCGGAPLGKEVTLKFKEKFPNVEIRQGYGLTETGGAGSRVIGPDEAERHGSVGRLAELMEAKIVDPATGEALP-PGQ-KG 335 (493)
Q Consensus 258 ~~~Ge~~~~~~~~~~~~~~~~~~v~~~yG~tE~g~~~~~~~~~~~~~~~~~~g~p~~~~~~~i~d~~~~~~~~-~g~-~G 335 (493)
++||+++++++.+++.+.+ +..+++.||+||++...... ........++|+|.++++++|+| +++++++ .|+ .|
T Consensus 247 ~~gg~~~~~~~~~~~~~~~-~~~~~~~YG~tE~~~~~~~~--~~~~~~~~~vG~~~~g~~~~i~d-~~~~~~~~~~~~~G 322 (471)
T PRK07787 247 VSGSAALPVPVFDRLAALT-GHRPVERYGMTETLITLSTR--ADGERRPGWVGLPLAGVETRLVD-EDGGPVPHDGETVG 322 (471)
T ss_pred EECCCCCCHHHHHHHHHHc-CCCeecccCccccCcceecC--CCCcccCCcccccCCCcEEEEEC-CCCCCCCCCCCCce
Confidence 9999999999999999988 78999999999998654332 22233456899999999999999 4577776 344 89
Q ss_pred EEEEeCccccccccCCcccccccccCCCeeeccceEEEcCCCcEEEEccc-CCeEEeCceeeChHHHHHHHhcCCCcceE
Q 011116 336 ELWLRGPTIMKGYVGDDKATSETVHSEGWLKTGDLCYFDSNGFLFIVDRL-KELIKYKAYQVPPVELEHLLHSNPEIADA 414 (493)
Q Consensus 336 el~v~~~~~~~gy~~~~~~~~~~~~~~~~~~TgD~~~~~~~g~~~~~GR~-~d~i~~~G~~i~~~~ie~~l~~~~~v~~~ 414 (493)
||+++|+.++.||+++++.+.+.|..++||+|||++++++||++++.||. |++++.+|.+|++.+||++|..++.|.++
T Consensus 323 ei~v~g~~~~~gy~~~~~~t~~~~~~~~~~~TGDlg~~~~dg~l~~~GR~~d~~i~~~G~~v~~~eIE~~l~~~~~v~~~ 402 (471)
T PRK07787 323 ELQVRGPTLFDGYLNRPDATAAAFTADGWFRTGDVAVVDPDGMHRIVGRESTDLIKSGGYRIGAGEIETALLGHPGVREA 402 (471)
T ss_pred EEEEECcccchhhcCChhhchhcccCCCceecCceEEEcCCCCEEEeCCCCceeEeeCCEEECHHHHHHHHHhCCCcceE
Confidence 99999999999999999999998877899999999999999999999996 89999999999999999999999999999
Q ss_pred EEEeeeCCCCCeeEEEEEEeCCCCCCCHHHHHHHHHhcCCCCCCcceEEEeccccCCCCCccchHHHHHH
Q 011116 415 AVIPYPDEEAGQIPMAFVVRKPGSNITEAEIMDFIAKQVAPYKKIRRVAFINSIPKSTAGKILRRELVTH 484 (493)
Q Consensus 415 ~v~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~l~~~l~~~~~p~~~~~~~~lP~t~~GK~~r~~l~~~ 484 (493)
+|++.++...++.+++++++. ...+.+++.++++++++++++|..++++++||+|++||++|+.|+++
T Consensus 403 ~v~~~~~~~~~~~~~a~v~~~--~~~~~~~l~~~l~~~l~~~~~P~~i~~~~~iP~~~~GKi~r~~L~~~ 470 (471)
T PRK07787 403 AVVGVPDDDLGQRIVAYVVGA--DDVAADELIDFVAQQLSVHKRPREVRFVDALPRNAMGKVLKKQLLSE 470 (471)
T ss_pred EEEcccccccCeEEEEEEEeC--CCCCHHHHHHHHHhhcccccCCcEEEEeccCCCCCCccccHHHhccC
Confidence 999998887788899998873 34678899999999999999999999999999999999999999764
No 72
>PTZ00342 acyl-CoA synthetase; Provisional
Probab=100.00 E-value=4.6e-61 Score=500.39 Aligned_cols=454 Identities=19% Similarity=0.196 Sum_probs=355.1
Q ss_pred HHHHHHhh---CCCCCC-----------CEEEEECCCCCCcHHHHHHHHHHcCCeeccCCCCCCHHHHHHHHhhcCCeEE
Q 011116 19 LSHALSKR---DSLCRK-----------TTSLTSSPLPPSTSPVLYFSLLSLGVVISPANPLSSTSEVSHQIQLSKPSIA 84 (493)
Q Consensus 19 lA~~L~~~---~gl~~g-----------d~V~l~~~~~~~~~~~~~lA~~~~G~~~v~i~~~~~~~~l~~~l~~~~~~~i 84 (493)
+|++| .+ .|+++| |+|+++++ |+++|+++++||+++|++.+|+++.++.+++.++++.++++++
T Consensus 104 ~A~~L-~~~~~~Gv~~g~~~~~~~~g~~d~V~i~~~-N~~ew~~~~lA~~~~Gav~Vpl~~~~~~~el~~il~~s~~~~l 181 (746)
T PTZ00342 104 FSHSL-NTYEGKGIPEKKYNEEQNNGKFKLLGLYGS-NSINWLVADLACMLSGVTTLVMHSKFSIDVIVDILNETKLEWL 181 (746)
T ss_pred HHHHH-HHHhhcCCCcCccccccccccccEEEEEcC-CCHHHHHHHHHHHHcCCeEEEecCCCCHHHHHHHHhcCCCCEE
Confidence 49999 54 599999 99999999 9999999999999999999999999999999999999999999
Q ss_pred EEcCCCcccCCC------CC-cEEEecCchh-------------------------------------------------
Q 011116 85 FATSHTSYKLPS------NL-RTILMDSPEF------------------------------------------------- 108 (493)
Q Consensus 85 l~~~~~~~~~~~------~~-~~~~~~~~~~------------------------------------------------- 108 (493)
+++.+..+.+.+ .+ .++.++....
T Consensus 182 v~~~~~~~~l~~~~~~~~~l~~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 261 (746)
T PTZ00342 182 CLDLDLVEGLLERKNELPHLKKLIILDTLIKSKEININKEEKNNGSNVNNNGNKNNKEEQKGNDLSNELEDISLGPLEYD 261 (746)
T ss_pred EEcHHHHHHHHHhhccCCCceEEEEECCCCcccccccccccccccccccccccccccccccccccccccccccccccccc
Confidence 997655443221 12 2444433110
Q ss_pred -------hhhhccCcc-------------cccccCCCCCCCCCCeEEEEccCCCCCCccceecchHHHHHHHHHhhhhcc
Q 011116 109 -------ISLLNQNED-------------VADFANSNMTVYQSDPAAILYSSGTTGKVKGVLLSHLNVIAIIAGYYHVTE 168 (493)
Q Consensus 109 -------~~~~~~~~~-------------~~~~~~~~~~~~~~~~~~i~~TSGTTG~pK~v~~t~~~~~~~~~~~~~~~~ 168 (493)
..+...... ............+++++.|+|||||||.||||++||+++.+.+........
T Consensus 262 ~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dd~a~IiYTSGTTG~PKGVmlTH~nl~~~~~~~~~~~~ 341 (746)
T PTZ00342 262 KEKLEKIKDLKEKAKKLGISIILFDDMTKNKTTNYKIQNEDPDFITSIVYTSGTSGKPKGVMLSNKNLYNTVVPLCKHSI 341 (746)
T ss_pred hhhhhhhHHHHHHhhcCCCEEEEHHHHHhhcccCCCCCCCCccceEEEEEcCCCCCCCCEEEEccHHHHHHHHHHhhccc
Confidence 001000000 000001122456789999999999999999999999999988765443211
Q ss_pred cCCCCCCCCCCcEEEEecChhHHHHHHHHHHHHhcCCeEEEecCCCHHHHHHHHHhcCeeecccChHHHHHHHhccc---
Q 011116 169 ETDPNEGPPPHPVSFFTLPMFHVFGFFMLVRAASKGETLVFMERFDFEKMLKAVENYRVTYMPVSPPLIVAFINSKL--- 245 (493)
Q Consensus 169 ~~~~~~~~~~~~~~~~~~pl~~~~g~~~~~~~l~~G~~~~~~~~~~~~~~~~~l~~~~~t~l~~~P~~~~~l~~~~~--- 245 (493)
. .....+++++.+|++|++++...+.+++.|+++++.+. ++..+++.+++++||+++++|.++..+.+...
T Consensus 342 ~-----~~~~~d~~ls~LPL~Hi~~~~~~~~~l~~G~~i~~~~~-~~~~l~~di~~~~pT~~~~VP~v~~~i~~~i~~~~ 415 (746)
T PTZ00342 342 F-----KKYNPKTHLSYLPISHIYERVIAYLSFMLGGTINIWSK-DINYFSKDIYNSKGNILAGVPKVFNRIYTNIMTEI 415 (746)
T ss_pred c-----cCCCCCeEEEeCcHHHHHHHHHHHHHHHcCCEEEEeCC-CHHHHHHHHHHhCCcEEEchHHHHHHHHHHHHHHH
Confidence 0 11345899999999999999777888999999998865 78999999999999999999999988875210
Q ss_pred -----CCC----------------------------------CCCCCeeEEEecCCCCCHHHHHHHHHhCCCCceecccc
Q 011116 246 -----TDK----------------------------------YDLSSLQLLGCGGAPLGKEVTLKFKEKFPNVEIRQGYG 286 (493)
Q Consensus 246 -----~~~----------------------------------~~l~~lr~v~~~Ge~~~~~~~~~~~~~~~~~~v~~~yG 286 (493)
... ...+++|.+++||+++++++.++|+..+ ++++++.||
T Consensus 416 ~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~v~~kir~~lg~~lr~~~sGGapl~~~~~~~~~~~~-g~~i~~gYG 494 (746)
T PTZ00342 416 NNLPPLKRFLVKKILSLRKSNNNGGFSKFLEGITHISSKIKDKVNPNLEVILNGGGKLSPKIAEELSVLL-NVNYYQGYG 494 (746)
T ss_pred hhcCHHHHHHHHHHHHHHHHhhcCCcchHHHHHHHHHHHHHHhhCCCeEEEEEcCCCCCHHHHHHHHHhc-CCCEEEeec
Confidence 000 0025899999999999999999999988 899999999
Q ss_pred ccccCCccccccCCCCCCCCCcccccc-CCceEEEEcCCCCccCCCCCceEEEEeCccccccccCCcccccccccCCCee
Q 011116 287 LTETGGAGSRVIGPDEAERHGSVGRLA-ELMEAKIVDPATGEALPPGQKGELWLRGPTIMKGYVGDDKATSETVHSEGWL 365 (493)
Q Consensus 287 ~tE~g~~~~~~~~~~~~~~~~~~g~p~-~~~~~~i~d~~~~~~~~~g~~Gel~v~~~~~~~gy~~~~~~~~~~~~~~~~~ 365 (493)
+||+++..+... ......+++|.|+ ++++++|+|.++......+..|||+++||.++.||+++|+.|.+.|+.+|||
T Consensus 495 lTEt~~~~~~~~--~~~~~~gsvG~p~~pg~e~ki~d~~~~~~~~~~~~GEl~vrGp~v~~GY~~~pe~T~~~f~~dGW~ 572 (746)
T PTZ00342 495 LTETTGPIFVQH--ADDNNTESIGGPISPNTKYKVRTWETYKATDTLPKGELLIKSDSIFSGYFLEKEQTKNAFTEDGYF 572 (746)
T ss_pred cCcccceeeecc--CCCCCcccccCcCCCcEEEEEecccccccCCCCCceEEEEecCcccccccCChhhhhhhcCcCCcc
Confidence 999977655422 2334678999998 9999999986555444555679999999999999999999999999889999
Q ss_pred eccceEEEcCCCcEEEEcccCCeEEe-CceeeChHHHHHHHhcCCCcceEEEEeeeCCCCCeeEEEEEEeCCC-------
Q 011116 366 KTGDLCYFDSNGFLFIVDRLKELIKY-KAYQVPPVELEHLLHSNPEIADAAVIPYPDEEAGQIPMAFVVRKPG------- 437 (493)
Q Consensus 366 ~TgD~~~~~~~g~~~~~GR~~d~i~~-~G~~i~~~~ie~~l~~~~~v~~~~v~~~~~~~~~~~~~~~v~~~~~------- 437 (493)
+|||+|++++||++++.||.+|+||+ +|++|+|.+||+++.++|.|.+++|++.. ....++++|++...
T Consensus 573 ~TGDig~~d~dG~l~i~gR~kdlIkls~Ge~I~p~eIE~~l~~~p~V~~~~VvG~~---~~~~~~Alvv~d~~~~~~~a~ 649 (746)
T PTZ00342 573 KTGDIVQINKNGSLTFLDRSKGLVKLSQGEYIETDMLNNLYSQISFINFCVVYGDD---SMDGPLAIISVDKYLLFKCLK 649 (746)
T ss_pred cCCcEEEECCCCeEEEEccCCCeEEeCCCEEEchHHHHHHHhcCCCccEEEEEccC---CccccEEEEECCHHHHHHHHH
Confidence 99999999999999999999999997 79999999999999999999999999863 22357888887531
Q ss_pred -------CCC---CH-----------HH----HHHH---H--HhcCCCCCCcceEEEec-cc----cCCCCCccchHHHH
Q 011116 438 -------SNI---TE-----------AE----IMDF---I--AKQVAPYKKIRRVAFIN-SI----PKSTAGKILRRELV 482 (493)
Q Consensus 438 -------~~~---~~-----------~~----l~~~---l--~~~l~~~~~p~~~~~~~-~l----P~t~~GK~~r~~l~ 482 (493)
... +. .+ +.+. + +++|+.+.++++|.++. ++ -+|+|.|+.|+.+.
T Consensus 650 ~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~e~i~~~~l~~~~~t~~~~lTpt~KlkR~~v~ 729 (746)
T PTZ00342 650 DDNMLESTGINEKNYLEKLTDETINNNIYVDYVKGKMLEVYKKTNLNRYNIINDIYLTSKVWDTNNYLTPTFKVKRFYVF 729 (746)
T ss_pred hcCCccccccCcccHHHHhhhhhhccHHHHHHHHHHHHHHHHHhCCccceeeeeEEEecCCCCCCCccChhhhhhHHHHH
Confidence 001 10 01 1212 2 22599999999998873 33 38999999999999
Q ss_pred HHHh
Q 011116 483 THAI 486 (493)
Q Consensus 483 ~~~~ 486 (493)
+.+.
T Consensus 730 ~~y~ 733 (746)
T PTZ00342 730 KDYA 733 (746)
T ss_pred HHHH
Confidence 8665
No 73
>PRK06018 putative acyl-CoA synthetase; Provisional
Probab=100.00 E-value=4.1e-60 Score=487.00 Aligned_cols=454 Identities=24% Similarity=0.388 Sum_probs=375.7
Q ss_pred hHHHHHHhhCCCCCCCEEEEECCCCCCcHHHHHHHHHHcCCeeccCCCCCCHHHHHHHHhhcCCeEEEEcCCCcccCCC-
Q 011116 18 TLSHALSKRDSLCRKTTSLTSSPLPPSTSPVLYFSLLSLGVVISPANPLSSTSEVSHQIQLSKPSIAFATSHTSYKLPS- 96 (493)
Q Consensus 18 ~lA~~L~~~~gl~~gd~V~l~~~~~~~~~~~~~lA~~~~G~~~v~i~~~~~~~~l~~~l~~~~~~~il~~~~~~~~~~~- 96 (493)
++|++| .+.|+++||+|+++++ |+++++++++||+++|++++|+++..+.+++.++++.++++.++++......+.+
T Consensus 51 ~la~~L-~~~g~~~gd~v~i~~~-~~~~~~~~~la~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~i~~~~~~~~~~~~~ 128 (542)
T PRK06018 51 KVSQAL-DRDGIKLGDRVATIAW-NTWRHLEAWYGIMGIGAICHTVNPRLFPEQIAWIINHAEDRVVITDLTFVPILEKI 128 (542)
T ss_pred HHHHHH-HHcCCCCCCEEEEEcC-CchHHHHHHHHHHhcCeEeeccccccCHHHHHHHHhccCCCEEEEccccHHHHHHH
Confidence 359999 7789999999999999 9999999999999999999999999999999999999999999998765443221
Q ss_pred -----CCc-EEEecCc------------hhhhhhccCcccccccCCCCCCCCCCeEEEEccCCCCCCccceecchHHHHH
Q 011116 97 -----NLR-TILMDSP------------EFISLLNQNEDVADFANSNMTVYQSDPAAILYSSGTTGKVKGVLLSHLNVIA 158 (493)
Q Consensus 97 -----~~~-~~~~~~~------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~TSGTTG~pK~v~~t~~~~~~ 158 (493)
... .+.+.+. .|.+++.... ..........+++++++|||||||.||+|.++|.++..
T Consensus 129 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~i~~TSGTTG~PKgv~~s~~~~~~ 204 (542)
T PRK06018 129 ADKLPSVERYVVLTDAAHMPQTTLKNAVAYEEWIAEAD----GDFAWKTFDENTAAGMCYTSGTTGDPKGVLYSHRSNVL 204 (542)
T ss_pred HhhCCCccEEEEecccccccccCccccccHHHHhccCC----cccCcccCCccceeeEEecCCCCCCCcEEEEechhHHH
Confidence 111 2222111 1222222211 01112234567899999999999999999999997532
Q ss_pred -HH-HHhhhhcccCCCCCCCCCCcEEEEecChhHHHHHHHHHHHHhcCCeEEEec-CCCHHHHHHHHHhcCeeecccChH
Q 011116 159 -II-AGYYHVTEETDPNEGPPPHPVSFFTLPMFHVFGFFMLVRAASKGETLVFME-RFDFEKMLKAVENYRVTYMPVSPP 235 (493)
Q Consensus 159 -~~-~~~~~~~~~~~~~~~~~~~~~~~~~~pl~~~~g~~~~~~~l~~G~~~~~~~-~~~~~~~~~~l~~~~~t~l~~~P~ 235 (493)
.. ......+ ++..+++++...|++|..++...+.++..|+++++.. .++++.+++.++++++|++.++|+
T Consensus 205 ~~~~~~~~~~~-------~~~~~d~~~~~~p~~h~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~l~~~~~t~~~~~p~ 277 (542)
T PRK06018 205 HALMANNGDAL-------GTSAADTMLPVVPLFHANSWGIAFSAPSMGTKLVMPGAKLDGASVYELLDTEKVTFTAGVPT 277 (542)
T ss_pred HHHHHhhhhhc-------CCCCCCEEEEecCHHHHhhhHHHHhhhhcCceEEccCcCCCHHHHHHHHHhcCCceeecCcH
Confidence 22 1222222 4578899999999999998876778899999998874 568899999999999999999999
Q ss_pred HHHHHHhcccCCCCCCCCeeEEEecCCCCCHHHHHHHHHhCCCCceeccccccccCCccccccCCCCC---------CCC
Q 011116 236 LIVAFINSKLTDKYDLSSLQLLGCGGAPLGKEVTLKFKEKFPNVEIRQGYGLTETGGAGSRVIGPDEA---------ERH 306 (493)
Q Consensus 236 ~~~~l~~~~~~~~~~l~~lr~v~~~Ge~~~~~~~~~~~~~~~~~~v~~~yG~tE~g~~~~~~~~~~~~---------~~~ 306 (493)
++..+++.......+++++|.++++|+++++++.++|++ + ++.+++.||+||++.+++.+...... ...
T Consensus 278 ~~~~l~~~~~~~~~~~~~lr~~~~~G~~l~~~~~~~~~~-~-~~~~~~~YG~tE~~~~~~~~~~~~~~~~~~~~~~~~~~ 355 (542)
T PRK06018 278 VWLMLLQYMEKEGLKLPHLKMVVCGGSAMPRSMIKAFED-M-GVEVRHAWGMTEMSPLGTLAALKPPFSKLPGDARLDVL 355 (542)
T ss_pred HHHHHHhcccccCCCcccceEEEEcCCCCCHHHHHHHHH-h-CCCeEeeecccccCcccccccCccccccCCchhhhhcc
Confidence 999998877666667789999999999999999999999 7 89999999999998765543211110 113
Q ss_pred CccccccCCceEEEEcCCCCccCCCC--CceEEEEeCccccccccCCcccccccccCCCeeeccceEEEcCCCcEEEEcc
Q 011116 307 GSVGRLAELMEAKIVDPATGEALPPG--QKGELWLRGPTIMKGYVGDDKATSETVHSEGWLKTGDLCYFDSNGFLFIVDR 384 (493)
Q Consensus 307 ~~~g~p~~~~~~~i~d~~~~~~~~~g--~~Gel~v~~~~~~~gy~~~~~~~~~~~~~~~~~~TgD~~~~~~~g~~~~~GR 384 (493)
.+.|+|.++++++|+| ++++.++.+ ..|||+++|+.++.||++.. ...++.++||+|||+++++++|++++.||
T Consensus 356 ~~~G~~~~g~~i~v~d-~~~~~~~~~~~~~Gel~i~g~~~~~gy~~~~---~~~~~~~~~~~TGDl~~~~~~g~~~~~GR 431 (542)
T PRK06018 356 QKQGYPPFGVEMKITD-DAGKELPWDGKTFGRLKVRGPAVAAAYYRVD---GEILDDDGFFDTGDVATIDAYGYMRITDR 431 (542)
T ss_pred ccCCCCCCCcEEEEEC-CCCCCCCCCCCceeEEEEecCCcchhhhcCc---ccEecCCcEEEcCCEEEEcCCccEEEEec
Confidence 5689999999999999 567777643 67999999999999999842 33445689999999999999999999999
Q ss_pred cCCeEEeCceeeChHHHHHHHhcCCCcceEEEEeeeCCCCCeeEEEEEEeCCCCCCCHHHHHHHHHhcCCCCCCcceEEE
Q 011116 385 LKELIKYKAYQVPPVELEHLLHSNPEIADAAVIPYPDEEAGQIPMAFVVRKPGSNITEAEIMDFIAKQVAPYKKIRRVAF 464 (493)
Q Consensus 385 ~~d~i~~~G~~i~~~~ie~~l~~~~~v~~~~v~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~l~~~l~~~~~p~~~~~ 464 (493)
.+|+|+.+|.++++.+||..+.++|+|.+++|++..++..++.+.+++++.++...+.++++++++++++.+++|..+.+
T Consensus 432 ~~d~i~~~G~~v~~~eIE~~l~~~~~v~~~~v~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~~~l~~~~~P~~i~~ 511 (542)
T PRK06018 432 SKDVIKSGGEWISSIDLENLAVGHPKVAEAAVIGVYHPKWDERPLLIVQLKPGETATREEILKYMDGKIAKWWMPDDVAF 511 (542)
T ss_pred CCCeEEECCEEECHHHHHHHHHhCCcceeEEEEeccCCCcCceeEEEEEeCCCCCCCHHHHHHHHHhhCccccCCcEEEE
Confidence 99999999999999999999999999999999999988878888999998887777888999999999999999999999
Q ss_pred eccccCCCCCccchHHHHHHHhhCCC
Q 011116 465 INSIPKSTAGKILRRELVTHAISGNL 490 (493)
Q Consensus 465 ~~~lP~t~~GK~~r~~l~~~~~~~~~ 490 (493)
+++||+|++||++|+.||+++.+-++
T Consensus 512 v~~iP~t~~GKi~r~~L~~~~~~~~~ 537 (542)
T PRK06018 512 VDAIPHTATGKILKTALREQFKDYKL 537 (542)
T ss_pred eccCCCCCcchhhHHHHHHHHhccCC
Confidence 99999999999999999999987554
No 74
>PRK07059 Long-chain-fatty-acid--CoA ligase; Validated
Probab=100.00 E-value=3.3e-60 Score=489.54 Aligned_cols=458 Identities=28% Similarity=0.447 Sum_probs=375.3
Q ss_pred hHHHHHHhhCCCCCCCEEEEECCCCCCcHHHHHHHHHHcCCeeccCCCCCCHHHHHHHHhhcCCeEEEEcCCCcccCCC-
Q 011116 18 TLSHALSKRDSLCRKTTSLTSSPLPPSTSPVLYFSLLSLGVVISPANPLSSTSEVSHQIQLSKPSIAFATSHTSYKLPS- 96 (493)
Q Consensus 18 ~lA~~L~~~~gl~~gd~V~l~~~~~~~~~~~~~lA~~~~G~~~v~i~~~~~~~~l~~~l~~~~~~~il~~~~~~~~~~~- 96 (493)
++|.+| .+.|+++||+|+++++ |+++++++++||+++|++++|++|.++.+++.++++.++++++++++.....+.+
T Consensus 60 ~~a~~L-~~~gi~~gd~V~i~~~-n~~~~~~~~la~~~~G~~~v~v~~~~~~~~~~~~~~~~~~~~vi~~~~~~~~~~~~ 137 (557)
T PRK07059 60 ALAAWL-QSRGLAKGARVAIMMP-NVLQYPVAIAAVLRAGYVVVNVNPLYTPRELEHQLKDSGAEAIVVLENFATTVQQV 137 (557)
T ss_pred HHHHHH-HHhCCCCCCEEEEECC-CCHHHHHHHHHHHhcCeEEeccCcccCHHHHHHHHHccCceEEEEchhhHHHHHHh
Confidence 359999 7789999999999999 9999999999999999999999999999999999999999999998754332211
Q ss_pred ----CCcEEEecC-------------------------------chhhhhhccCcccccccCCCCCCCCCCeEEEEccCC
Q 011116 97 ----NLRTILMDS-------------------------------PEFISLLNQNEDVADFANSNMTVYQSDPAAILYSSG 141 (493)
Q Consensus 97 ----~~~~~~~~~-------------------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~TSG 141 (493)
....+.+.. ..+...+.... ..........++++++++||||
T Consensus 138 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~a~il~TSG 214 (557)
T PRK07059 138 LAKTAVKHVVVASMGDLLGFKGHIVNFVVRRVKKMVPAWSLPGHVRFNDALAEGA---RQTFKPVKLGPDDVAFLQYTGG 214 (557)
T ss_pred hcccCCceeEEecccccccccccccccccccccccccccCCCCcccHHHHhhccC---CCCCCCCCCCcCceEEEEeCCC
Confidence 111111110 00111111110 0011123456789999999999
Q ss_pred CCCCccceecchHHHHHHHHHhhhhcccCCCCCCCCCCcEEEEecChhHHHHH-HHHHHHHhcCCeEEEec-CCCHHHHH
Q 011116 142 TTGKVKGVLLSHLNVIAIIAGYYHVTEETDPNEGPPPHPVSFFTLPMFHVFGF-FMLVRAASKGETLVFME-RFDFEKML 219 (493)
Q Consensus 142 TTG~pK~v~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pl~~~~g~-~~~~~~l~~G~~~~~~~-~~~~~~~~ 219 (493)
|||.||+|.++|.++..++.....................+++.+|++|.+++ ...+.++..|++.++.+ ..++..++
T Consensus 215 TTG~PK~v~~s~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pl~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~ 294 (557)
T PRK07059 215 TTGVSKGATLLHRNIVANVLQMEAWLQPAFEKKPRPDQLNFVCALPLYHIFALTVCGLLGMRTGGRNILIPNPRDIPGFI 294 (557)
T ss_pred CCCCCcEEEeecHHHHHHHHHHhhhhcccccccCCCCCcEEEEeCCcHHHHHHHHHHHHHHhhcceEEEecCCcCHHHHH
Confidence 99999999999999987655433322110000001124567888999999887 56677888888877664 45789999
Q ss_pred HHHHhcCeeecccChHHHHHHHhcccCCCCCCCCeeEEEecCCCCCHHHHHHHHHhCCCCceeccccccccCCccccccC
Q 011116 220 KAVENYRVTYMPVSPPLIVAFINSKLTDKYDLSSLQLLGCGGAPLGKEVTLKFKEKFPNVEIRQGYGLTETGGAGSRVIG 299 (493)
Q Consensus 220 ~~l~~~~~t~l~~~P~~~~~l~~~~~~~~~~l~~lr~v~~~Ge~~~~~~~~~~~~~~~~~~v~~~yG~tE~g~~~~~~~~ 299 (493)
+.++++++|.+.++|.++..++.........++++|.++.||+++++.+.++|.+.+ ++++++.||+||++.+++.+.
T Consensus 295 ~~i~~~~vt~~~~~p~~~~~l~~~~~~~~~~~~~l~~~~~gg~~~~~~~~~~~~~~~-~~~~~~~YG~tE~~~~~~~~~- 372 (557)
T PRK07059 295 KELKKYQVHIFPAVNTLYNALLNNPDFDKLDFSKLIVANGGGMAVQRPVAERWLEMT-GCPITEGYGLSETSPVATCNP- 372 (557)
T ss_pred HHHHHhCCeeeecCHHHHHHHHcCcCcCcCCchhheEEEeccccCCHHHHHHHHHHh-CCCeeeccccccccchhhcCC-
Confidence 999999999999999999999887655556678999999999999999999999988 899999999999988765432
Q ss_pred CCCCCCCCccccccCCceEEEEcCCCCccCCCCCceEEEEeCccccccccCCcccccccccCCCeeeccceEEEcCCCcE
Q 011116 300 PDEAERHGSVGRLAELMEAKIVDPATGEALPPGQKGELWLRGPTIMKGYVGDDKATSETVHSEGWLKTGDLCYFDSNGFL 379 (493)
Q Consensus 300 ~~~~~~~~~~g~p~~~~~~~i~d~~~~~~~~~g~~Gel~v~~~~~~~gy~~~~~~~~~~~~~~~~~~TgD~~~~~~~g~~ 379 (493)
........++|.|+++++++++| +++++++.|+.|||+++|+.++.||+++++.+...+..+|||+|||+++++++|.+
T Consensus 373 ~~~~~~~~~vG~p~~g~~v~i~d-~~~~~~~~g~~Gel~v~g~~~~~gY~~~~~~~~~~~~~~g~~~TGDl~~~~~~g~~ 451 (557)
T PRK07059 373 VDATEFSGTIGLPLPSTEVSIRD-DDGNDLPLGEPGEICIRGPQVMAGYWNRPDETAKVMTADGFFRTGDVGVMDERGYT 451 (557)
T ss_pred CCCCCcCCcccCccCCcEEEEEC-CCCCCCCCCCceEEEEeCCccchhhhcCHHHHhhhcccCCceecCcEEEEcCCCcE
Confidence 22223457899999999999999 67899999999999999999999999999999888878899999999999999999
Q ss_pred EEEcccCCeEEeCceeeChHHHHHHHhcCCCcceEEEEeeeCCCCCeeEEEEEEeCCCCCCCHHHHHHHHHhcCCCCCCc
Q 011116 380 FIVDRLKELIKYKAYQVPPVELEHLLHSNPEIADAAVIPYPDEEAGQIPMAFVVRKPGSNITEAEIMDFIAKQVAPYKKI 459 (493)
Q Consensus 380 ~~~GR~~d~i~~~G~~i~~~~ie~~l~~~~~v~~~~v~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~l~~~l~~~~~p 459 (493)
++.||.+|+|+++|++|+|.+||++|.++++|.++++++.+++..++.++++++... ...+.+++.+++.++++.+++|
T Consensus 452 ~~~GR~~~~i~~~G~~i~p~~iE~~l~~~~~V~~~~v~~~~~~~~ge~~~~~v~~~~-~~~~~~~l~~~~~~~l~~~~~P 530 (557)
T PRK07059 452 KIVDRKKDMILVSGFNVYPNEIEEVVASHPGVLEVAAVGVPDEHSGEAVKLFVVKKD-PALTEEDVKAFCKERLTNYKRP 530 (557)
T ss_pred EEecccccceEECCEEEcHHHHHHHHHhCCceeEEEEEecccCCCCeeEEEEEEeCC-CCCCHHHHHHHHHHhcccccCC
Confidence 999999999999999999999999999999999999999988888888888888654 3466789999999999999999
Q ss_pred ceEEEeccccCCCCCccchHHHHHH
Q 011116 460 RRVAFINSIPKSTAGKILRRELVTH 484 (493)
Q Consensus 460 ~~~~~~~~lP~t~~GK~~r~~l~~~ 484 (493)
..+.+++++|+|.+||++|+.|+++
T Consensus 531 ~~i~~v~~~P~t~~GK~~r~~L~~~ 555 (557)
T PRK07059 531 KFVEFRTELPKTNVGKILRRELRDG 555 (557)
T ss_pred cEEEEeccCCCCcccceeHHHHHhh
Confidence 9999999999999999999999865
No 75
>PRK08633 2-acyl-glycerophospho-ethanolamine acyltransferase; Validated
Probab=100.00 E-value=6.7e-61 Score=535.11 Aligned_cols=456 Identities=29% Similarity=0.389 Sum_probs=382.1
Q ss_pred hHHHHHHhhCCCCCCCEEEEECCCCCCcHHHHHHHHHHcCCeeccCCCCCCHHHHHHHHhhcCCeEEEEcCCCcccCCC-
Q 011116 18 TLSHALSKRDSLCRKTTSLTSSPLPPSTSPVLYFSLLSLGVVISPANPLSSTSEVSHQIQLSKPSIAFATSHTSYKLPS- 96 (493)
Q Consensus 18 ~lA~~L~~~~gl~~gd~V~l~~~~~~~~~~~~~lA~~~~G~~~v~i~~~~~~~~l~~~l~~~~~~~il~~~~~~~~~~~- 96 (493)
++|++| .+ ++++||+|+++++ |+++++++++||+++|++++|+++..+.+++.+++++++++.++++++..+.+.+
T Consensus 653 ~~a~~L-~~-~~~~g~~V~i~~~-n~~~~~~~~la~~~~G~v~v~l~~~~~~~~~~~~l~~~~~~~vi~~~~~~~~~~~~ 729 (1146)
T PRK08633 653 ALARLL-KR-ELKDEENVGILLP-PSVAGALANLALLLAGKVPVNLNYTASEAALKSAIEQAQIKTVITSRKFLEKLKNK 729 (1146)
T ss_pred HHHHHH-HH-hCCCCCeEEEECC-CchHHHHHHHHHHHcCCEEEEeCCCcCHHHHHHHHHHcCCCEEEEcHHHHHHHhcc
Confidence 359999 55 4899999999999 9999999999999999999999999999999999999999999998755444321
Q ss_pred --------CCcEEEecCc--------hhhhhhccCccccc--ccCCCCCCCCCCeEEEEccCCCCCCccceecchHHHHH
Q 011116 97 --------NLRTILMDSP--------EFISLLNQNEDVAD--FANSNMTVYQSDPAAILYSSGTTGKVKGVLLSHLNVIA 158 (493)
Q Consensus 97 --------~~~~~~~~~~--------~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~i~~TSGTTG~pK~v~~t~~~~~~ 158 (493)
..+++.+++. .+............ .........++++++++|||||||.||+|.++|+++..
T Consensus 730 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~i~~TSGTTG~PKgv~~s~~~~~~ 809 (1146)
T PRK08633 730 GFDLELPENVKVIYLEDLKAKISKVDKLTALLAARLLPARLLKRLYGPTFKPDDTATIIFSSGSEGEPKGVMLSHHNILS 809 (1146)
T ss_pred CCchhcccCceEEEeehhccccchhHHHHHHHHhccCCHHHHHhhccCCCCCCCEEEEEECCCCCCCCceEEechHHHHH
Confidence 1223333221 11111111000000 00001345679999999999999999999999999998
Q ss_pred HHHHhhhhcccCCCCCCCCCCcEEEEecChhHHHHHH-HHHHHHhcCCeEEEec-CCCHHHHHHHHHhcCeeecccChHH
Q 011116 159 IIAGYYHVTEETDPNEGPPPHPVSFFTLPMFHVFGFF-MLVRAASKGETLVFME-RFDFEKMLKAVENYRVTYMPVSPPL 236 (493)
Q Consensus 159 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~pl~~~~g~~-~~~~~l~~G~~~~~~~-~~~~~~~~~~l~~~~~t~l~~~P~~ 236 (493)
........++ ..++|++++.+|++|..++. ..+.++..|+++++.+ ..+++.+++.++++++|++.++|++
T Consensus 810 ~~~~~~~~~~-------~~~~d~~l~~~p~~h~~g~~~~~~~~l~~g~~~v~~~~~~~~~~~~~~i~~~~~t~~~~~P~~ 882 (1146)
T PRK08633 810 NIEQISDVFN-------LRNDDVILSSLPFFHSFGLTVTLWLPLLEGIKVVYHPDPTDALGIAKLVAKHRATILLGTPTF 882 (1146)
T ss_pred HHHHHHHhcC-------CCCCCEEEEcCcHHHHHhHHHHHHHHHHCCCEEEEeCCCCCHHHHHHHHHHcCCeEEEecHHH
Confidence 8877666653 37889999999999999984 5888999999998875 5789999999999999999999999
Q ss_pred HHHHHhcccCCCCCCCCeeEEEecCCCCCHHHHHHHHHhCCCCceeccccccccCCccccccCCC--------CCCCCCc
Q 011116 237 IVAFINSKLTDKYDLSSLQLLGCGGAPLGKEVTLKFKEKFPNVEIRQGYGLTETGGAGSRVIGPD--------EAERHGS 308 (493)
Q Consensus 237 ~~~l~~~~~~~~~~l~~lr~v~~~Ge~~~~~~~~~~~~~~~~~~v~~~yG~tE~g~~~~~~~~~~--------~~~~~~~ 308 (493)
++.+.+.......+++++|.+++|||++++++.+++++.+ ++++++.||+||+++.++...... ......+
T Consensus 883 ~~~l~~~~~~~~~~~~~lr~~~~gg~~~~~~~~~~~~~~~-g~~~~~~YG~tE~~~~~~~~~~~~~~~~~~~~~~~~~~~ 961 (1146)
T PRK08633 883 LRLYLRNKKLHPLMFASLRLVVAGAEKLKPEVADAFEEKF-GIRILEGYGATETSPVASVNLPDVLAADFKRQTGSKEGS 961 (1146)
T ss_pred HHHHHhccccCcccCCCeeeEEEcCCcCCHHHHHHHHHHh-CCCeecccccccCcceEEEecCcccccccccccCCCCCC
Confidence 9999886655666788999999999999999999999999 899999999999987665422111 1124578
Q ss_pred cccccCCceEEEEcCCCCccCCCCCceEEEEeCccccccccCCcccccccccC---CCeeeccceEEEcCCCcEEEEccc
Q 011116 309 VGRLAELMEAKIVDPATGEALPPGQKGELWLRGPTIMKGYVGDDKATSETVHS---EGWLKTGDLCYFDSNGFLFIVDRL 385 (493)
Q Consensus 309 ~g~p~~~~~~~i~d~~~~~~~~~g~~Gel~v~~~~~~~gy~~~~~~~~~~~~~---~~~~~TgD~~~~~~~g~~~~~GR~ 385 (493)
+|+|.++++++|+|++++++++.|+.|||+++|+.++.||+++++.+.+.+.. ++||+|||++++++||.+++.||.
T Consensus 962 vG~p~~~~~v~i~d~~~~~~~~~g~~Gel~v~g~~~~~gY~~~~~~t~~~~~~~~~~~~~~TGD~~~~~~~g~l~~~gR~ 1041 (1146)
T PRK08633 962 VGMPLPGVAVRIVDPETFEELPPGEDGLILIGGPQVMKGYLGDPEKTAEVIKDIDGIGWYVTGDKGHLDEDGFLTITDRY 1041 (1146)
T ss_pred ccccCCCCEEEEEcCCCCccCCCCCceEEEEcCCCccccccCCccchHHHhhcCCCCCeEECCCEEEEcCCceEEEEecc
Confidence 99999999999999888999999999999999999999999999988877742 389999999999999999999999
Q ss_pred CCeEEeCceeeChHHHHHHHhcCC--CcceEEEEeeeCCCCCeeEEEEEEeCCCCCCCHHHHHHHHHh-cCCCCCCcceE
Q 011116 386 KELIKYKAYQVPPVELEHLLHSNP--EIADAAVIPYPDEEAGQIPMAFVVRKPGSNITEAEIMDFIAK-QVAPYKKIRRV 462 (493)
Q Consensus 386 ~d~i~~~G~~i~~~~ie~~l~~~~--~v~~~~v~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~l~~-~l~~~~~p~~~ 462 (493)
||+||++|++|+|.+||++|.++| .+.++++++.+++..++.++++++.. ..+.+++++++.+ +++++++|..+
T Consensus 1042 ~d~i~~~G~~v~~~eiE~~l~~~~~~~~~~~~v~~~~~~~~g~~~~~~v~~~---~~~~~~l~~~~~~~~l~~~~~P~~i 1118 (1146)
T PRK08633 1042 SRFAKIGGEMVPLGAVEEELAKALGGEEVVFAVTAVPDEKKGEKLVVLHTCG---AEDVEELKRAIKESGLPNLWKPSRY 1118 (1146)
T ss_pred cchhhhCcEEECHHHHHHHHHhccCCCCceEEEEeccCCCCCcEEEEEEecC---ccCHHHHHHHHHhcCCCcccCCcEE
Confidence 999999999999999999999998 46679999999988888888888862 3567889998875 69999999999
Q ss_pred EEeccccCCCCCccchHHHHHHHhh
Q 011116 463 AFINSIPKSTAGKILRRELVTHAIS 487 (493)
Q Consensus 463 ~~~~~lP~t~~GK~~r~~l~~~~~~ 487 (493)
++++++|+|++||++|+.||+++.+
T Consensus 1119 ~~~~~iP~t~~GKi~r~~L~~~~~~ 1143 (1146)
T PRK08633 1119 FKVEALPLLGSGKLDLKGLKELALA 1143 (1146)
T ss_pred EEecCcCCCCCCCCcHHHHHHHHHH
Confidence 9999999999999999999998654
No 76
>TIGR03443 alpha_am_amid L-aminoadipate-semialdehyde dehydrogenase. Members of this protein family are L-aminoadipate-semialdehyde dehydrogenase (EC 1.2.1.31), product of the LYS2 gene. It is also called alpha-aminoadipate reductase. In fungi, lysine is synthesized via aminoadipate. Currently, all members of this family are fungal.
Probab=100.00 E-value=5.2e-61 Score=542.92 Aligned_cols=452 Identities=16% Similarity=0.203 Sum_probs=370.5
Q ss_pred HHHHHHhhCCCCCCCEEEEECCCCCCcHHHHHHHHHHcCCeeccCCCCCCHHHHHHHHhhcCCeEEEEcCCCc---ccCC
Q 011116 19 LSHALSKRDSLCRKTTSLTSSPLPPSTSPVLYFSLLSLGVVISPANPLSSTSEVSHQIQLSKPSIAFATSHTS---YKLP 95 (493)
Q Consensus 19 lA~~L~~~~gl~~gd~V~l~~~~~~~~~~~~~lA~~~~G~~~v~i~~~~~~~~l~~~l~~~~~~~il~~~~~~---~~~~ 95 (493)
+|++| .+.|+++||+|+++++ |+++++++++||+++|++++|++|.++.+++.++++.+++++++++.... ..+.
T Consensus 283 lA~~L-~~~gv~~g~~V~i~~~-~~~~~i~~~lA~l~~G~~~vpldp~~p~~~~~~~l~~~~~~~li~~~~~~~~~~~~~ 360 (1389)
T TIGR03443 283 LAHYL-LKTGIKRGDVVMIYAY-RGVDLVVAVMGVLKAGATFSVIDPAYPPARQTIYLSVAKPRALIVIEKAGTLDQLVR 360 (1389)
T ss_pred HHHHH-HHhCCCCCCEEEEEec-CCHHHHHHHHHHHhhCcEEeccCCCCcHHHHHHHHHhcCCCEEEEeccccccchhhh
Confidence 59999 7789999999999999 99999999999999999999999999999999999999999999876421 1100
Q ss_pred C----------CCcEEEecCchh----------hhhhccCcccccccCCCCCCCCCCeEEEEccCCCCCCccceecchHH
Q 011116 96 S----------NLRTILMDSPEF----------ISLLNQNEDVADFANSNMTVYQSDPAAILYSSGTTGKVKGVLLSHLN 155 (493)
Q Consensus 96 ~----------~~~~~~~~~~~~----------~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~TSGTTG~pK~v~~t~~~ 155 (493)
. ....+.+..... ......... ...........++++++++|||||||.||||+++|++
T Consensus 361 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~d~a~ii~TSGSTG~PKgV~~sh~~ 439 (1389)
T TIGR03443 361 DYIDKELELRTEIPALALQDDGSLVGGSLEGGETDVLAPYQA-LKDTPTGVVVGPDSNPTLSFTSGSEGIPKGVLGRHFS 439 (1389)
T ss_pred hhhhcccccccccceEEecccccccccccccccccccccccc-cccCCCCCcCCCCCceEEEECCCCCCCCCEEEeccHH
Confidence 0 111111111100 000000000 0000111234578999999999999999999999999
Q ss_pred HHHHHHHhhhhcccCCCCCCCCCCcEEEEecChhHHHHHHHHHHHHhcCCeEEEecC---CCHHHHHHHHHhcCeeeccc
Q 011116 156 VIAIIAGYYHVTEETDPNEGPPPHPVSFFTLPMFHVFGFFMLVRAASKGETLVFMER---FDFEKMLKAVENYRVTYMPV 232 (493)
Q Consensus 156 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pl~~~~g~~~~~~~l~~G~~~~~~~~---~~~~~~~~~l~~~~~t~l~~ 232 (493)
+...+.+....+. +.++++++...|++|..++..++.+++.|+++++.+. .++..+++.++++++|++.+
T Consensus 440 l~~~~~~~~~~~~-------~~~~d~~~~~~~~~~d~~~~~i~~~L~~G~~l~~~~~~~~~~~~~l~~~i~~~~vt~~~~ 512 (1389)
T TIGR03443 440 LAYYFPWMAKRFG-------LSENDKFTMLSGIAHDPIQRDMFTPLFLGAQLLVPTADDIGTPGRLAEWMAKYGATVTHL 512 (1389)
T ss_pred HHHHHHHHHHhcC-------CCCCCEEEEecCceecchHHHHHHHHhCCCEEEEcChhhccCHHHHHHHHHHhCCeEEEe
Confidence 9988877766663 4788999999999999998999999999999998854 36889999999999999999
Q ss_pred ChHHHHHHHhcccCCCCCCCCeeEEEecCCCCCHHHHHHHHHhCCCCceeccccccccCCccccccCCCC---------C
Q 011116 233 SPPLIVAFINSKLTDKYDLSSLQLLGCGGAPLGKEVTLKFKEKFPNVEIRQGYGLTETGGAGSRVIGPDE---------A 303 (493)
Q Consensus 233 ~P~~~~~l~~~~~~~~~~l~~lr~v~~~Ge~~~~~~~~~~~~~~~~~~v~~~yG~tE~g~~~~~~~~~~~---------~ 303 (493)
+|++++.|.... ...++++|.+++|||++++++.+++.+.++++++++.||+||++..++....... .
T Consensus 513 ~Ps~~~~l~~~~---~~~~~~lr~~~~gGe~l~~~~~~~~~~~~~~~~l~n~YG~TE~~~~~~~~~~~~~~~~~~~~~~~ 589 (1389)
T TIGR03443 513 TPAMGQLLSAQA---TTPIPSLHHAFFVGDILTKRDCLRLQTLAENVCIVNMYGTTETQRAVSYFEIPSRSSDSTFLKNL 589 (1389)
T ss_pred CHHHHHHHHhcc---cccCCCccEEEEecccCCHHHHHHHHHhCCCCEEEECccCCccceeEEEEEccccccccchhhcc
Confidence 999998887543 2347889999999999999999999998888999999999999876554222111 1
Q ss_pred CCCCccccccCCceEEEEcCCC-CccCCCCCceEEEEeCccccccccCCccccccccc----------------------
Q 011116 304 ERHGSVGRLAELMEAKIVDPAT-GEALPPGQKGELWLRGPTIMKGYVGDDKATSETVH---------------------- 360 (493)
Q Consensus 304 ~~~~~~g~p~~~~~~~i~d~~~-~~~~~~g~~Gel~v~~~~~~~gy~~~~~~~~~~~~---------------------- 360 (493)
....++|+|++++++.|+|+++ +++++.|+.|||+|+|+.+++||+++|+.+.+.|.
T Consensus 590 ~~~~~~G~~~~~~~~~ivd~~~~~~~~~~G~~GEL~i~G~~v~~GY~~~p~~t~~~f~~~~~~~~~~~~~~~~~~~~~~~ 669 (1389)
T TIGR03443 590 KDVMPAGKGMKNVQLLVVNRNDRTQTCGVGEVGEIYVRAGGLAEGYLGLPELNAEKFVNNWFVDPSHWIDLDKENNKPER 669 (1389)
T ss_pred cCcCcCCCccCCCEEEEECCccCCCcCCCCCceEEEecccccchhcCCChhHhhhhccCCcccCcccccccccccccccc
Confidence 1235689999999999999543 57899999999999999999999999999988773
Q ss_pred ------CCCeeeccceEEEcCCCcEEEEcccCCeEEeCceeeChHHHHHHHhcCCCcceEEEEeeeCCCCCeeEEEEEEe
Q 011116 361 ------SEGWLKTGDLCYFDSNGFLFIVDRLKELIKYKAYQVPPVELEHLLHSNPEIADAAVIPYPDEEAGQIPMAFVVR 434 (493)
Q Consensus 361 ------~~~~~~TgD~~~~~~~g~~~~~GR~~d~i~~~G~~i~~~~ie~~l~~~~~v~~~~v~~~~~~~~~~~~~~~v~~ 434 (493)
.++||+|||+|++++||.++|.||.||+||++|++|+|.+||.+|.++|.|.+++|+...++..++.+++++++
T Consensus 670 ~~~~~~~~~~y~TGDlg~~~~dG~l~~~GR~dd~Iki~G~rI~p~eIE~~l~~~p~V~~a~v~~~~~~~~~~~lva~vv~ 749 (1389)
T TIGR03443 670 EFWLGPRDRLYRTGDLGRYLPDGNVECCGRADDQVKIRGFRIELGEIDTHLSQHPLVRENVTLVRRDKDEEPTLVSYIVP 749 (1389)
T ss_pred cccCCCccceeecCCceeEcCCCCEEEecccCCEEEeCcEEecHHHHHHHHHhCcchheeEEEEeeCCCCCeEEEEEEec
Confidence 25799999999999999999999999999999999999999999999999999999988877777889999987
Q ss_pred CCCC-C-------------------------CCHHHHHHHHHhcCCCCCCcceEEEeccccCCCCCccchHHHHH
Q 011116 435 KPGS-N-------------------------ITEAEIMDFIAKQVAPYKKIRRVAFINSIPKSTAGKILRRELVT 483 (493)
Q Consensus 435 ~~~~-~-------------------------~~~~~l~~~l~~~l~~~~~p~~~~~~~~lP~t~~GK~~r~~l~~ 483 (493)
.... . ...++++++++++|+.|++|..++++++||+|++||++|+.|++
T Consensus 750 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~Lp~y~~P~~~~~~~~lP~t~~GKidr~~L~~ 824 (1389)
T TIGR03443 750 QDKSDELEEFKSEVDDEESSDPVVKGLIKYRKLIKDIREYLKKKLPSYAIPTVIVPLKKLPLNPNGKVDKPALPF 824 (1389)
T ss_pred cCccccccccccccccccccccchhhhhhhhhhHHHHHHHHHhhCCcccCCceEEEcccCCCCCCccccHhhcCC
Confidence 6221 1 01367899999999999999999999999999999999999964
No 77
>PRK10252 entF enterobactin synthase subunit F; Provisional
Probab=100.00 E-value=1.3e-60 Score=538.07 Aligned_cols=445 Identities=18% Similarity=0.273 Sum_probs=378.2
Q ss_pred HHHHHHhhCCCCCCCEEEEECCCCCCcHHHHHHHHHHcCCeeccCCCCCCHHHHHHHHhhcCCeEEEEcCCCcccCCCC-
Q 011116 19 LSHALSKRDSLCRKTTSLTSSPLPPSTSPVLYFSLLSLGVVISPANPLSSTSEVSHQIQLSKPSIAFATSHTSYKLPSN- 97 (493)
Q Consensus 19 lA~~L~~~~gl~~gd~V~l~~~~~~~~~~~~~lA~~~~G~~~v~i~~~~~~~~l~~~l~~~~~~~il~~~~~~~~~~~~- 97 (493)
+|++| .+.|+++||+|+++++ ++++++++++||+++|++++|++|..+.+++.++++.+++++++++......+.+.
T Consensus 496 la~~L-~~~g~~~g~~V~l~~~-~~~~~i~~~la~~~~G~~~vpld~~~p~~~~~~~l~~~~~~~~i~~~~~~~~~~~~~ 573 (1296)
T PRK10252 496 LANLL-RERGVKPGDSVAVALP-RSVFLTLALHAIVEAGAAWLPLDTGYPDDRLKMMLEDARPSLLITTADQLPRFADVP 573 (1296)
T ss_pred HHHHH-HHcCCCCCCEEEEEeC-CCHHHHHHHHHHHHhCCEEEecCccCHHHHHHHHHHhCCCCEEEECcchhhhcccCC
Confidence 49999 7789999999999999 99999999999999999999999999999999999999999999998765555431
Q ss_pred -CcEEEecCchhhhhhccCcccccccCCCCCCCCCCeEEEEccCCCCCCccceecchHHHHHHHHHhhhhcccCCCCCCC
Q 011116 98 -LRTILMDSPEFISLLNQNEDVADFANSNMTVYQSDPAAILYSSGTTGKVKGVLLSHLNVIAIIAGYYHVTEETDPNEGP 176 (493)
Q Consensus 98 -~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~TSGTTG~pK~v~~t~~~~~~~~~~~~~~~~~~~~~~~~ 176 (493)
.....++. ..... . ........++++++++|||||||.||||.++|+++.+.+.+....+. +
T Consensus 574 ~~~~~~~~~-----~~~~~----~-~~~~~~~~~~~~a~i~~TSGSTG~PKgV~~~h~~l~~~~~~~~~~~~-------~ 636 (1296)
T PRK10252 574 DLTSLCYNA-----PLAPQ----G-AAPLQLSQPHHTAYIIFTSGSTGRPKGVMVGQTAIVNRLLWMQNHYP-------L 636 (1296)
T ss_pred Cceeeeccc-----ccccc----c-CCCCCCCCCCCeEEEEECCCCCCCCCEEEeccHHHHHHHHHHHHhcC-------C
Confidence 11111111 11111 0 11112235789999999999999999999999999998888777764 4
Q ss_pred CCCcEEEEecChhHHHHHHHHHHHHhcCCeEEEec---CCCHHHHHHHHHhcCeeecccChHHHHHHHhcccCCC--CCC
Q 011116 177 PPHPVSFFTLPMFHVFGFFMLVRAASKGETLVFME---RFDFEKMLKAVENYRVTYMPVSPPLIVAFINSKLTDK--YDL 251 (493)
Q Consensus 177 ~~~~~~~~~~pl~~~~g~~~~~~~l~~G~~~~~~~---~~~~~~~~~~l~~~~~t~l~~~P~~~~~l~~~~~~~~--~~l 251 (493)
.++++++...|++|..+++.++.++..|+++++.+ ..++..+++.++++++|++.++|+++..+++...... ..+
T Consensus 637 ~~~d~~l~~~~~~fd~~~~~~~~~l~~G~~l~~~~~~~~~~~~~~~~~i~~~~vt~~~~~Ps~l~~l~~~~~~~~~~~~~ 716 (1296)
T PRK10252 637 TADDVVLQKTPCSFDVSVWEFFWPFIAGAKLVMAEPEAHRDPLAMQQFFAEYGVTTTHFVPSMLAAFVASLTPEGARQSC 716 (1296)
T ss_pred CCCCEEEEeCCcchhhhHHHHHHHHhCCCEEEECChhccCCHHHHHHHHHHcCCeEEEeCHHHHHHHHhhhccccccccC
Confidence 88999999999999999999999999999999975 3578999999999999999999999999887643222 346
Q ss_pred CCeeEEEecCCCCCHHHHHHHHHhCCCCceeccccccccCCccccccCCCC-----CCCCCccccccCCceEEEEcCCCC
Q 011116 252 SSLQLLGCGGAPLGKEVTLKFKEKFPNVEIRQGYGLTETGGAGSRVIGPDE-----AERHGSVGRLAELMEAKIVDPATG 326 (493)
Q Consensus 252 ~~lr~v~~~Ge~~~~~~~~~~~~~~~~~~v~~~yG~tE~g~~~~~~~~~~~-----~~~~~~~g~p~~~~~~~i~d~~~~ 326 (493)
+++|.+++|||++++++.+.|.+.+ ++++++.||+||++..++....... .....++|+|++++.++|+| +.+
T Consensus 717 ~~lr~i~~gGe~l~~~~~~~~~~~~-~~~l~n~YG~TE~~~~~~~~~~~~~~~~~~~~~~~~iG~p~~~~~~~i~d-~~~ 794 (1296)
T PRK10252 717 ASLRQVFCSGEALPADLCREWQQLT-GAPLHNLYGPTEAAVDVSWYPAFGEELAAVRGSSVPIGYPVWNTGLRILD-ARM 794 (1296)
T ss_pred CCccEEEEecCCCCHHHHHHHHhcC-CCEEEeCCCcchhhheeeeeecccccccccCCCCCCcccccCCCEEEEEC-CCC
Confidence 7899999999999999999999988 8899999999999876554322111 22346799999999999999 789
Q ss_pred ccCCCCCceEEEEeCccccccccCCcccccccccCC------CeeeccceEEEcCCCcEEEEcccCCeEEeCceeeChHH
Q 011116 327 EALPPGQKGELWLRGPTIMKGYVGDDKATSETVHSE------GWLKTGDLCYFDSNGFLFIVDRLKELIKYKAYQVPPVE 400 (493)
Q Consensus 327 ~~~~~g~~Gel~v~~~~~~~gy~~~~~~~~~~~~~~------~~~~TgD~~~~~~~g~~~~~GR~~d~i~~~G~~i~~~~ 400 (493)
++++.|..|||+++|+.+++||+++++.+.+.|..+ +||+|||+|++++||.++++||.|++||++|.+|++.+
T Consensus 795 ~~~~~g~~Gel~i~g~~~~~GY~~~~~~t~~~f~~~~~~~~~~~y~TGDl~~~~~~G~l~~~GR~d~~ik~~G~ri~~~e 874 (1296)
T PRK10252 795 RPVPPGVAGDLYLTGIQLAQGYLGRPDLTASRFIADPFAPGERMYRTGDVARWLDDGAVEYLGRSDDQLKIRGQRIELGE 874 (1296)
T ss_pred CCCCCCCceEEEecccccchhhCCCcccchhhcccCCCCCCCEEEecCceEEEcCCCcEEEecccCCeEEEeeEEecHHH
Confidence 999999999999999999999999999998888543 49999999999999999999999999999999999999
Q ss_pred HHHHHhcCCCcceEEEEeee------CCCCCeeEEEEEEeCCCCCCCHHHHHHHHHhcCCCCCCcceEEEeccccCCCCC
Q 011116 401 LEHLLHSNPEIADAAVIPYP------DEEAGQIPMAFVVRKPGSNITEAEIMDFIAKQVAPYKKIRRVAFINSIPKSTAG 474 (493)
Q Consensus 401 ie~~l~~~~~v~~~~v~~~~------~~~~~~~~~~~v~~~~~~~~~~~~l~~~l~~~l~~~~~p~~~~~~~~lP~t~~G 474 (493)
||.+|.++|+|.+++|+... .......++++++...+...+.++++++++++|+.|++|..++.+++||+|++|
T Consensus 875 IE~~l~~~~~v~~a~v~~~~~~~~~~~~~~~~~lva~v~~~~~~~~~~~~l~~~l~~~Lp~~~~P~~~~~~~~lP~t~~G 954 (1296)
T PRK10252 875 IDRAMQALPDVEQAVTHACVINQAAATGGDARQLVGYLVSQSGLPLDTSALQAQLRERLPPHMVPVVLLQLDQLPLSANG 954 (1296)
T ss_pred HHHHHHhCccccceEEEEEeccccccCCCCccEEEEEEEcCCCCCCCHHHHHHHHHhhCchhcCCcEEEEecCCCCCCCc
Confidence 99999999999999887653 111224688898887766677899999999999999999999999999999999
Q ss_pred ccchHHHHHH
Q 011116 475 KILRRELVTH 484 (493)
Q Consensus 475 K~~r~~l~~~ 484 (493)
|++|+.|++.
T Consensus 955 Kidr~~L~~~ 964 (1296)
T PRK10252 955 KLDRKALPLP 964 (1296)
T ss_pred ChhHHhcCCC
Confidence 9999999764
No 78
>PRK13383 acyl-CoA synthetase; Provisional
Probab=100.00 E-value=3e-60 Score=485.35 Aligned_cols=438 Identities=24% Similarity=0.359 Sum_probs=366.9
Q ss_pred HHHHHHhhCCCCCCCEEEEECCCCCCcHHHHHHHHHHcCCeeccCCCCCCHHHHHHHHhhcCCeEEEEcCCCcccCCCC-
Q 011116 19 LSHALSKRDSLCRKTTSLTSSPLPPSTSPVLYFSLLSLGVVISPANPLSSTSEVSHQIQLSKPSIAFATSHTSYKLPSN- 97 (493)
Q Consensus 19 lA~~L~~~~gl~~gd~V~l~~~~~~~~~~~~~lA~~~~G~~~v~i~~~~~~~~l~~~l~~~~~~~il~~~~~~~~~~~~- 97 (493)
+|++| .+.|+++||+|+++++ |+++++++++||+++|++++|+++.++.+++.++++.++++.+++++.....+...
T Consensus 73 la~~L-~~~gi~~g~~V~i~~~-~~~~~~~~~la~~~~G~v~vpl~~~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~~~~ 150 (516)
T PRK13383 73 LARRL-TRDGVAPGRAVGVMCR-NGRGFVTAVFAVGLLGADVVPISTEFRSDALAAALRAHHISTVVADNEFAERIAGAD 150 (516)
T ss_pred HHHHH-HhcCCCCCCEEEEECC-CCHHHHHHHHHHHHhCeEEEEcCccCCHHHHHHHHhcCCCCEEEEchhHHHHHHhhh
Confidence 49999 7789999999999999 99999999999999999999999999999999999999999999987665544321
Q ss_pred CcEEEecCchhhhhhccCcccccccCCCCCCCCCCeEEEEccCCCCCCccceecchHHHHHH--HHHhhhhcccCCCCCC
Q 011116 98 LRTILMDSPEFISLLNQNEDVADFANSNMTVYQSDPAAILYSSGTTGKVKGVLLSHLNVIAI--IAGYYHVTEETDPNEG 175 (493)
Q Consensus 98 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~TSGTTG~pK~v~~t~~~~~~~--~~~~~~~~~~~~~~~~ 175 (493)
.....++.. .... .. ....+...++.++++|||||||.||+|.++|...... .......+ +
T Consensus 151 ~~~~~~~~~-~~~~--~~-------~~~~p~~~~~~~~il~TSGTTG~PK~v~~s~~~~~~~~~~~~~~~~~-------~ 213 (516)
T PRK13383 151 DAVAVIDPA-TAGA--EE-------SGGRPAVAAPGRIVLLTSGTTGKPKGVPRAPQLRSAVGVWVTILDRT-------R 213 (516)
T ss_pred cceEEeccc-hhhh--hc-------CCCCCCCCCCCcEEEECCCCCCCCCeeeecchhhhhhhhHHhHHhhh-------c
Confidence 122222211 1000 00 0011123456789999999999999999998743211 11112222 3
Q ss_pred CCCCcEEEEecChhHHHHHHHHHHHHhcCCeEEEecCCCHHHHHHHHHhcCeeecccChHHHHHHHhcccC--CCCCCCC
Q 011116 176 PPPHPVSFFTLPMFHVFGFFMLVRAASKGETLVFMERFDFEKMLKAVENYRVTYMPVSPPLIVAFINSKLT--DKYDLSS 253 (493)
Q Consensus 176 ~~~~~~~~~~~pl~~~~g~~~~~~~l~~G~~~~~~~~~~~~~~~~~l~~~~~t~l~~~P~~~~~l~~~~~~--~~~~l~~ 253 (493)
..++++++..+|++|.+++..++.++..|++++....++++.+++.++++++|.+.++|+++..+.+.... ....+++
T Consensus 214 ~~~~d~~~~~~pl~h~~g~~~~~~~l~~G~~~~~~~~~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~~~~~~~~ 293 (516)
T PRK13383 214 LRTGSRISVAMPMFHGLGLGMLMLTIALGGTVLTHRHFDAEAALAQASLHRADAFTAVPVVLARILELPPRVRARNPLPQ 293 (516)
T ss_pred cCCCCeEEEecCCcchhhHHHHHHHHhcCCEEEECCCCCHHHHHHHHHHhCCcEEEecHHHHHHHHhccccccccCCCCc
Confidence 47889999999999999998788899999999988888999999999999999999999999999876432 1234688
Q ss_pred eeEEEecCCCCCHHHHHHHHHhCCCCceeccccccccCCccccccCCCCCCCCCccccccCCceEEEEcCCCCccCCCCC
Q 011116 254 LQLLGCGGAPLGKEVTLKFKEKFPNVEIRQGYGLTETGGAGSRVIGPDEAERHGSVGRLAELMEAKIVDPATGEALPPGQ 333 (493)
Q Consensus 254 lr~v~~~Ge~~~~~~~~~~~~~~~~~~v~~~yG~tE~g~~~~~~~~~~~~~~~~~~g~p~~~~~~~i~d~~~~~~~~~g~ 333 (493)
+|.+++||+++++++.++|.+.| +..+++.||+||++..+.... ........++|+|.++++++|+| +++++++.|+
T Consensus 294 lr~i~~gG~~l~~~~~~~~~~~~-g~~v~~~YG~tE~~~~~~~~~-~~~~~~~~~~G~~~~~~~~~i~d-~~~~~~~~g~ 370 (516)
T PRK13383 294 LRVVMSSGDRLDPTLGQRFMDTY-GDILYNGYGSTEVGIGALATP-ADLRDAPETVGKPVAGCPVRILD-RNNRPVGPRV 370 (516)
T ss_pred eEEEEECCCCCCHHHHHHHHHHc-Cchhhhcccccccccceeccc-cccccCCCcccCCCCCcEEEEEC-CCCCCCCCCC
Confidence 99999999999999999999999 788999999999986554322 12233457899999999999999 6788999999
Q ss_pred ceEEEEeCccccccccCCcccccccccCCCeeeccceEEEcCCCcEEEEcccCCeEEeCceeeChHHHHHHHhcCCCcce
Q 011116 334 KGELWLRGPTIMKGYVGDDKATSETVHSEGWLKTGDLCYFDSNGFLFIVDRLKELIKYKAYQVPPVELEHLLHSNPEIAD 413 (493)
Q Consensus 334 ~Gel~v~~~~~~~gy~~~~~~~~~~~~~~~~~~TgD~~~~~~~g~~~~~GR~~d~i~~~G~~i~~~~ie~~l~~~~~v~~ 413 (493)
.|||+++|+.++.+|++++.. .+ .+|||+|||+++++++|++++.||.+|+||++|.+|++.+||.+|.++|+|.+
T Consensus 371 ~Gel~v~g~~~~~~Y~~~~~~---~~-~~g~~~TGDl~~~d~~G~l~i~GR~~~~i~~~G~~v~~~eiE~~l~~~~~v~~ 446 (516)
T PRK13383 371 TGRIFVGGELAGTRYTDGGGK---AV-VDGMTSTGDMGYLDNAGRLFIVGREDDMIISGGENVYPRAVENALAAHPAVAD 446 (516)
T ss_pred ceEEEEecCcccccccCCchh---he-ecCceecceeEEEcCCccEEEeccccceEEECCEEECHHHHHHHHHhCCCeeE
Confidence 999999999999999987542 22 47999999999999999999999999999999999999999999999999999
Q ss_pred EEEEeeeCCCCCeeEEEEEEeCCCCCCCHHHHHHHHHhcCCCCCCcceEEEeccccCCCCCccchHHHH
Q 011116 414 AAVIPYPDEEAGQIPMAFVVRKPGSNITEAEIMDFIAKQVAPYKKIRRVAFINSIPKSTAGKILRRELV 482 (493)
Q Consensus 414 ~~v~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~l~~~l~~~~~p~~~~~~~~lP~t~~GK~~r~~l~ 482 (493)
+++++.+++..++.+.+++++.++...+.++++++++++++++++|..+.+++++|+|++||++|+.|+
T Consensus 447 ~~vv~~~~~~~g~~~~~~v~~~~~~~~~~~~l~~~~~~~l~~~~~p~~i~~v~~iP~t~~gKi~r~~L~ 515 (516)
T PRK13383 447 NAVIGVPDERFGHRLAAFVVLHPGSGVDAAQLRDYLKDRVSRFEQPRDINIVSSIPRNPTGKVLRKELP 515 (516)
T ss_pred EEEEeccccccCceEEEEEEECCCCCCCHHHHHHHHHHhcccCCCCcEEEEeCCCCCCCCCcCcHHHhC
Confidence 999999888888999999998877667788999999999999999999999999999999999999874
No 79
>PRK12406 long-chain-fatty-acid--CoA ligase; Provisional
Probab=100.00 E-value=1.5e-59 Score=479.82 Aligned_cols=458 Identities=26% Similarity=0.376 Sum_probs=380.8
Q ss_pred cchhhhHHHHHHhhCCCCCCCEEEEECCCCCCcHHHHHHHHHHcCCeeccCCCCCCHHHHHHHHhhcCCeEEEEcCCCcc
Q 011116 13 SSARFTLSHALSKRDSLCRKTTSLTSSPLPPSTSPVLYFSLLSLGVVISPANPLSSTSEVSHQIQLSKPSIAFATSHTSY 92 (493)
Q Consensus 13 ~~~~~~lA~~L~~~~gl~~gd~V~l~~~~~~~~~~~~~lA~~~~G~~~v~i~~~~~~~~l~~~l~~~~~~~il~~~~~~~ 92 (493)
+++++ |++| .+.|+++||+|+++++ |+++++++++||+++|++++++++..+.+++.++++.+++++++++.+...
T Consensus 20 ~~~~l--a~~l-~~~g~~~g~~V~v~~~-~~~~~~~~~lA~~~~G~~~v~l~~~~~~~~~~~~l~~~~~~~i~~~~~~~~ 95 (509)
T PRK12406 20 RAARA--AGGL-AALGVRPGDCVALLMR-NDFAFFEAAYAAMRLGAYAVPVNWHFKPEEIAYILEDSGARVLIAHADLLH 95 (509)
T ss_pred HHHHH--HHHH-HHcCCCCCCEEEEEcC-CCHHHHHHHHHHHHcCeEEEecCcccCHHHHHHHHhccCCcEEEEccchhh
Confidence 35555 9999 7799999999999999 999999999999999999999999999999999999999999999876555
Q ss_pred cCCC----CCcEEEecCc---------------------hhhhhhccCcccccccCCCCCCCCCCeEEEEccCCCCCCcc
Q 011116 93 KLPS----NLRTILMDSP---------------------EFISLLNQNEDVADFANSNMTVYQSDPAAILYSSGTTGKVK 147 (493)
Q Consensus 93 ~~~~----~~~~~~~~~~---------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~TSGTTG~pK 147 (493)
.+.+ ....+..... +|.+.... .........+++++++|||||||.||
T Consensus 96 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~a~i~~TSGtTG~PK 168 (509)
T PRK12406 96 GLASALPAGVTVLSVPTPPEIAAAYRISPALLTPPAGAIDWEGWLAQ-------QEPYDGPPVPQPQSMIYTSGTTGHPK 168 (509)
T ss_pred hhhhhhhcccceeecccccccccccccccccccCCCCccCHHHHhcc-------cCccCCCCCCCceEEEECCCCCCCCc
Confidence 4332 1122212111 01111110 01112335689999999999999999
Q ss_pred ceecchHHHHH---HHHHhhhhcccCCCCCCCCCCcEEEEecChhHHHHHHHHHHHHhcCCeEEEecCCCHHHHHHHHHh
Q 011116 148 GVLLSHLNVIA---IIAGYYHVTEETDPNEGPPPHPVSFFTLPMFHVFGFFMLVRAASKGETLVFMERFDFEKMLKAVEN 224 (493)
Q Consensus 148 ~v~~t~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~pl~~~~g~~~~~~~l~~G~~~~~~~~~~~~~~~~~l~~ 224 (493)
+|.++|..... ........+ ++.++++++...|++|..+....+.++..|+++++.+..+++.+++.+++
T Consensus 169 ~v~~s~~~~~~~~~~~~~~~~~~-------~~~~~~~~l~~~p~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~l~~ 241 (509)
T PRK12406 169 GVRRAAPTPEQAAAAEQMRALIY-------GLKPGIRALLTGPLYHSAPNAYGLRAGRLGGVLVLQPRFDPEELLQLIER 241 (509)
T ss_pred eEEEechhHHHHHHHHHhhhhhc-------CCCCCceEEEEeCCcccchHHHHHHHHhhheEEEEccCCCHHHHHHHHHH
Confidence 99987655433 222233333 44788999999999998887666667889999998888899999999999
Q ss_pred cCeeecccChHHHHHHHhccc--CCCCCCCCeeEEEecCCCCCHHHHHHHHHhCCCCceeccccccccCCccccccCCCC
Q 011116 225 YRVTYMPVSPPLIVAFINSKL--TDKYDLSSLQLLGCGGAPLGKEVTLKFKEKFPNVEIRQGYGLTETGGAGSRVIGPDE 302 (493)
Q Consensus 225 ~~~t~l~~~P~~~~~l~~~~~--~~~~~l~~lr~v~~~Ge~~~~~~~~~~~~~~~~~~v~~~yG~tE~g~~~~~~~~~~~ 302 (493)
+++|++.++|+++..|+.... ....+++++|.+++||+++++++.+++.+.| ++.+++.||+||++.+.+.. ....
T Consensus 242 ~~~t~~~~~P~~~~~l~~~~~~~~~~~~~~~l~~v~~gg~~~~~~~~~~~~~~~-~~~~~~~YG~tE~~~~~~~~-~~~~ 319 (509)
T PRK12406 242 HRITHMHMVPTMFIRLLKLPEEVRAKYDVSSLRHVIHAAAPCPADVKRAMIEWW-GPVIYEYYGSTESGAVTFAT-SEDA 319 (509)
T ss_pred cCCeEEEccHHHHHHHHhCchhhcccCCCCceeEEEEcCCCCCHHHHHHHHHHc-CCcEEeeccccccCceEecC-cccc
Confidence 999999999999999987543 2334578999999999999999999999998 78899999999998765432 1222
Q ss_pred CCCCCccccccCCceEEEEcCCCCccCCCCCceEEEEeCccccc-cccCCcccccccccCCCeeeccceEEEcCCCcEEE
Q 011116 303 AERHGSVGRLAELMEAKIVDPATGEALPPGQKGELWLRGPTIMK-GYVGDDKATSETVHSEGWLKTGDLCYFDSNGFLFI 381 (493)
Q Consensus 303 ~~~~~~~g~p~~~~~~~i~d~~~~~~~~~g~~Gel~v~~~~~~~-gy~~~~~~~~~~~~~~~~~~TgD~~~~~~~g~~~~ 381 (493)
...++++|.|.++++++++| +++++++.|+.|||+++++.+.. +|+++++.+...+ .++||+|||+++++++|.+++
T Consensus 320 ~~~~~~~G~~~~~~~~~i~d-~~~~~~~~g~~Gel~v~~~~~~~~~y~~~~~~~~~~~-~~~~~~TGD~~~~~~~g~~~~ 397 (509)
T PRK12406 320 LSHPGTVGKAAPGAELRFVD-EDGRPLPQGEIGEIYSRIAGNPDFTYHNKPEKRAEID-RGGFITSGDVGYLDADGYLFL 397 (509)
T ss_pred cccCCCcCccCCCcEEEEEC-CCCCCCCCCCceEEEEECCccccccccCCchhccccc-CCCCeEEccEEEEcCCceEEE
Confidence 23457899999999999999 66899999999999999998875 8988888776655 689999999999999999999
Q ss_pred EcccCCeEEeCceeeChHHHHHHHhcCCCcceEEEEeeeCCCCCeeEEEEEEeCCCCCCCHHHHHHHHHhcCCCCCCcce
Q 011116 382 VDRLKELIKYKAYQVPPVELEHLLHSNPEIADAAVIPYPDEEAGQIPMAFVVRKPGSNITEAEIMDFIAKQVAPYKKIRR 461 (493)
Q Consensus 382 ~GR~~d~i~~~G~~i~~~~ie~~l~~~~~v~~~~v~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~l~~~l~~~~~p~~ 461 (493)
.||.+|++|++|.+|++.+||+.|.++++|.++++++..++..++.+++++++.+....+.+++++.++++++++++|..
T Consensus 398 ~GR~~d~ik~~G~~v~~~~IE~~l~~~~~v~~~~v~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~l~~~l~~~~~P~~ 477 (509)
T PRK12406 398 CDRKRDMVISGGVNIYPAEIEAVLHAVPGVHDCAVFGIPDAEFGEALMAVVEPQPGATLDEADIRAQLKARLAGYKVPKH 477 (509)
T ss_pred eecccceEEECCEEECHHHHHHHHHhCCCeeEEEEEeeeccccCceeEEEEEECCCCCCCHHHHHHHHHHhcccCCCCcE
Confidence 99999999999999999999999999999999999999888778888999998776667889999999999999999999
Q ss_pred EEEeccccCCCCCccchHHHHHHHhhCCCCC
Q 011116 462 VAFINSIPKSTAGKILRRELVTHAISGNLSK 492 (493)
Q Consensus 462 ~~~~~~lP~t~~GK~~r~~l~~~~~~~~~~~ 492 (493)
+.+++++|+|++||++|+.|++.+.+..-++
T Consensus 478 i~~~~~iP~t~~GK~~r~~L~~~~~~~~~~~ 508 (509)
T PRK12406 478 IEIMAELPREDSGKIFKRRLRDPYWANAGRK 508 (509)
T ss_pred EEEeccCCCCCccchhHHHHHHHHHhhcccc
Confidence 9999999999999999999999888765443
No 80
>PRK06178 acyl-CoA synthetase; Validated
Probab=100.00 E-value=8.4e-60 Score=487.60 Aligned_cols=458 Identities=28% Similarity=0.418 Sum_probs=377.9
Q ss_pred hHHHHHHhhCCCCCCCEEEEECCCCCCcHHHHHHHHHHcCCeeccCCCCCCHHHHHHHHhhcCCeEEEEcCCCcccCCC-
Q 011116 18 TLSHALSKRDSLCRKTTSLTSSPLPPSTSPVLYFSLLSLGVVISPANPLSSTSEVSHQIQLSKPSIAFATSHTSYKLPS- 96 (493)
Q Consensus 18 ~lA~~L~~~~gl~~gd~V~l~~~~~~~~~~~~~lA~~~~G~~~v~i~~~~~~~~l~~~l~~~~~~~il~~~~~~~~~~~- 96 (493)
++|.+| .+.|+++||+|+++++ |+++++++++||+++|++++|++|..+.+++.+++++++++++++++...+.+.+
T Consensus 70 ~la~~L-~~~g~~~g~~V~i~~~-n~~~~~~~~lA~~~~G~~~v~l~p~~~~~~~~~~l~~~~~~~ii~~~~~~~~l~~~ 147 (567)
T PRK06178 70 RFAALL-RQRGVGAGDRVAVFLP-NCPQFHIVFFGILKLGAVHVPVSPLFREHELSYELNDAGAEVLLALDQLAPVVEQV 147 (567)
T ss_pred HHHHHH-HHcCCCCCCEEEEECC-CCcHHHHHHHHHHHhCeEEeecCCCCCHHHHHHHHHhcCCcEEEEccchHHHHHHh
Confidence 349999 7789999999999999 9999999999999999999999999999999999999999999998865543321
Q ss_pred ----CCcEEE-ecCc-----------------------hhhhhhccCcccccccCCCCCCCCCCeEEEEccCCCCCCccc
Q 011116 97 ----NLRTIL-MDSP-----------------------EFISLLNQNEDVADFANSNMTVYQSDPAAILYSSGTTGKVKG 148 (493)
Q Consensus 97 ----~~~~~~-~~~~-----------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~TSGTTG~pK~ 148 (493)
....+. .... .+.++....... ...........+++++++|||||||.||+
T Consensus 148 ~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~a~i~~TSGTTG~PK~ 226 (567)
T PRK06178 148 RAETSLRHVIVTSLADVLPAEPTLPLPDSLRAPRLAAAGAIDLLPALRAC-TAPVPLPPPALDALAALNYTGGTTGMPKG 226 (567)
T ss_pred hccCCcceEEEeccccccccccccccccccccccccccccccHHHHhhcc-ccccccCCCCCCCeEEEEeCCCCCCCCce
Confidence 111111 1100 011111100000 00111223557899999999999999999
Q ss_pred eecchHHHHHHHHHhhhhcccCCCCCCCCCCcEEEEecChhHHHHH-HHHHHHHhcCCeEEEecCCCHHHHHHHHHhcCe
Q 011116 149 VLLSHLNVIAIIAGYYHVTEETDPNEGPPPHPVSFFTLPMFHVFGF-FMLVRAASKGETLVFMERFDFEKMLKAVENYRV 227 (493)
Q Consensus 149 v~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pl~~~~g~-~~~~~~l~~G~~~~~~~~~~~~~~~~~l~~~~~ 227 (493)
|.++|.++........... ....++++++..+|++|..|+ ..++.++..|+++++.+.+++..++..++++++
T Consensus 227 v~~t~~~~~~~~~~~~~~~------~~~~~~d~~l~~~p~~~~~g~~~~~~~~l~~G~~~~l~~~~~~~~~~~~i~~~~~ 300 (567)
T PRK06178 227 CEHTQRDMVYTAAAAYAVA------VVGGEDSVFLSFLPEFWIAGENFGLLFPLFSGATLVLLARWDAVAFMAAVERYRV 300 (567)
T ss_pred EEeccHHHHHHHHHHHHHh------ccCCCCcEEEEecchHHHHHHHHHHHHHHHcCceEEEeCCCCHHHHHHHHHHhCC
Confidence 9999999987665543332 124788999999999999998 578888999999999988899999999999999
Q ss_pred eecccChHHHHHHHhcccCCCCCCCCeeEEEec--CCCCCHHHHHHHHHhCCCCcee-ccccccccCCccccccCCCC--
Q 011116 228 TYMPVSPPLIVAFINSKLTDKYDLSSLQLLGCG--GAPLGKEVTLKFKEKFPNVEIR-QGYGLTETGGAGSRVIGPDE-- 302 (493)
Q Consensus 228 t~l~~~P~~~~~l~~~~~~~~~~l~~lr~v~~~--Ge~~~~~~~~~~~~~~~~~~v~-~~yG~tE~g~~~~~~~~~~~-- 302 (493)
|.+.++|..+..++.........+++++.+..+ ++.+++++.+.+++.+ +..++ +.||+||++...........
T Consensus 301 t~~~~~~~~~~~l~~~~~~~~~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~-g~~~~~~~YG~tE~~~~~~~~~~~~~~~ 379 (567)
T PRK06178 301 TRTVMLVDNAVELMDHPRFAEYDLSSLRQVRVVSFVKKLNPDYRQRWRALT-GSVLAEAAWGMTETHTCDTFTAGFQDDD 379 (567)
T ss_pred eEEeccHHHHHHHHhCCCCCCCCcchheeeeeccccccCCHHHHHHHHHHh-CCcccccccccccccccceeccccccCc
Confidence 999999999999887655455567778876544 5899999999999998 55555 47999998765433211111
Q ss_pred ---CCCCCccccccCCceEEEEcCCCCccCCCCCceEEEEeCccccccccCCcccccccccCCCeeeccceEEEcCCCcE
Q 011116 303 ---AERHGSVGRLAELMEAKIVDPATGEALPPGQKGELWLRGPTIMKGYVGDDKATSETVHSEGWLKTGDLCYFDSNGFL 379 (493)
Q Consensus 303 ---~~~~~~~g~p~~~~~~~i~d~~~~~~~~~g~~Gel~v~~~~~~~gy~~~~~~~~~~~~~~~~~~TgD~~~~~~~g~~ 379 (493)
...+.++|+|++|++++++|++++++++.|+.|||+++|+.++.||+++++.+...+ .+|||+|||+++++++|++
T Consensus 380 ~~~~~~~~~vG~p~~g~~v~v~d~~~~~~~~~g~~Gel~v~g~~v~~gY~~~~~~~~~~~-~dg~~~TGDl~~~~~~g~l 458 (567)
T PRK06178 380 FDLLSQPVFVGLPVPGTEFKICDFETGELLPLGAEGEIVVRTPSLLKGYWNKPEATAEAL-RDGWLHTGDIGKIDEQGFL 458 (567)
T ss_pred cccccCCcccccccCCcEEEEEcCCCCCcCCCCCceEEEEECCcccccccCChhhhhhcc-cCCceeecceEEEecCCeE
Confidence 123457899999999999998889999999999999999999999999999888777 4789999999999999999
Q ss_pred EEEcccCCeEEeCceeeChHHHHHHHhcCCCcceEEEEeeeCCCCCeeEEEEEEeCCCCCCCHHHHHHHHHhcCCCCCCc
Q 011116 380 FIVDRLKELIKYKAYQVPPVELEHLLHSNPEIADAAVIPYPDEEAGQIPMAFVVRKPGSNITEAEIMDFIAKQVAPYKKI 459 (493)
Q Consensus 380 ~~~GR~~d~i~~~G~~i~~~~ie~~l~~~~~v~~~~v~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~l~~~l~~~~~p 459 (493)
++.||.+|+|+.+|.+|++.+||+++.++++|.++++++..++..++.+++++++.++...+.+++.+.++++++.+++|
T Consensus 459 ~i~GR~~d~i~~~G~~i~~~eiE~~l~~~~~v~~~~v~~~~~~~~g~~~~~~v~~~~~~~~~~~~l~~~~~~~l~~~~~p 538 (567)
T PRK06178 459 HYLGRRKEMLKVNGMSVFPSEVEALLGQHPAVLGSAVVGRPDPDKGQVPVAFVQLKPGADLTAAALQAWCRENMAVYKVP 538 (567)
T ss_pred EEEecccccEEECCEEECHHHHHHHHHhCCCeeEEEEEcCcCcccCcceEEEEEeCCCCcCCHHHHHHHHHhcCcccCCc
Confidence 99999999999999999999999999999999999999998887788899999988776678899999999999999999
Q ss_pred ceEEEeccccCCCCCccchHHHHHHHhh
Q 011116 460 RRVAFINSIPKSTAGKILRRELVTHAIS 487 (493)
Q Consensus 460 ~~~~~~~~lP~t~~GK~~r~~l~~~~~~ 487 (493)
. +.+++++|+|++||++|+.|++++.+
T Consensus 539 ~-i~~v~~iP~t~~GKv~r~~l~~~~~~ 565 (567)
T PRK06178 539 E-IRIVDALPMTATGKVRKQDLQALAEE 565 (567)
T ss_pred e-EEEeccCCCCCccceeHHHHHHHHHh
Confidence 6 88899999999999999999998865
No 81
>PRK12316 peptide synthase; Provisional
Probab=100.00 E-value=7.4e-61 Score=583.54 Aligned_cols=449 Identities=21% Similarity=0.293 Sum_probs=388.3
Q ss_pred cchhhhHHHHHHhhCCCCCCCEEEEECCCCCCcHHHHHHHHHHcCCeeccCCCCCCHHHHHHHHhhcCCeEEEEcCCCcc
Q 011116 13 SSARFTLSHALSKRDSLCRKTTSLTSSPLPPSTSPVLYFSLLSLGVVISPANPLSSTSEVSHQIQLSKPSIAFATSHTSY 92 (493)
Q Consensus 13 ~~~~~~lA~~L~~~~gl~~gd~V~l~~~~~~~~~~~~~lA~~~~G~~~v~i~~~~~~~~l~~~l~~~~~~~il~~~~~~~ 92 (493)
+++++ |+.| .+.|+++|++|+++++ |+++++++++||+++|++++|++|.++.+++.++++.+++++++++.+...
T Consensus 545 ~~~~l--A~~L-~~~gv~~g~~V~l~~~-~s~~~i~~~la~~~aG~~~vpld~~~p~~rl~~il~~~~~~~~l~~~~~~~ 620 (5163)
T PRK12316 545 RANRL--AHAL-IERGVGPDVLVGVAME-RSIEMVVALLAILKAGGAYVPLDPEYPAERLAYMLEDSGVQLLLSQSHLGR 620 (5163)
T ss_pred HHHHH--HHHH-HHcCCCCCCEEEEEeC-CCHHHHHHHHHHHHcCCEEeccCccCcHHHHHHHHHhCCCCEEEEChhhhh
Confidence 34555 9999 7889999999999999 999999999999999999999999999999999999999999999986655
Q ss_pred cCCC--CCcEEEecCchhhhhhccCcccccccCCCCCCCCCCeEEEEccCCCCCCccceecchHHHHHHHHHhhhhcccC
Q 011116 93 KLPS--NLRTILMDSPEFISLLNQNEDVADFANSNMTVYQSDPAAILYSSGTTGKVKGVLLSHLNVIAIIAGYYHVTEET 170 (493)
Q Consensus 93 ~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~TSGTTG~pK~v~~t~~~~~~~~~~~~~~~~~~ 170 (493)
.+.. ...++.++.... ..... ..........++++++++|||||||.||||.++|+++.+.+.+....+.
T Consensus 621 ~~~~~~~~~~~~~~~~~~--~~~~~----~~~~~~~~~~~~~~a~ii~TSGSTG~PKgV~~~h~~l~~~~~~~~~~~~-- 692 (5163)
T PRK12316 621 KLPLAAGVQVLDLDRPAA--WLEGY----SEENPGTELNPENLAYVIYTSGSTGKPKGAGNRHRALSNRLCWMQQAYG-- 692 (5163)
T ss_pred hCCcccCceEEEecCcch--hhccC----CCCCCCCCCCCCCeEEEEECCCcCCCCCEeeEcCHHHHHHHHHHHHhcC--
Confidence 4432 333444442211 11111 1122223456789999999999999999999999999998888777764
Q ss_pred CCCCCCCCCcEEEEecChhHHHHHHHHHHHHhcCCeEEEec---CCCHHHHHHHHHhcCeeecccChHHHHHHHhcccCC
Q 011116 171 DPNEGPPPHPVSFFTLPMFHVFGFFMLVRAASKGETLVFME---RFDFEKMLKAVENYRVTYMPVSPPLIVAFINSKLTD 247 (493)
Q Consensus 171 ~~~~~~~~~~~~~~~~pl~~~~g~~~~~~~l~~G~~~~~~~---~~~~~~~~~~l~~~~~t~l~~~P~~~~~l~~~~~~~ 247 (493)
+.++++++..+|++|..+++.++.++..|+++++.+ ..++..+++.++++++|++.++|++++.|++...
T Consensus 693 -----~~~~d~~l~~~p~~fd~~~~~~~~~L~~G~~l~i~~~~~~~~~~~~~~~i~~~~vt~~~~~Ps~~~~l~~~~~-- 765 (5163)
T PRK12316 693 -----LGVGDTVLQKTPFSFDVSVWEFFWPLMSGARLVVAAPGDHRDPAKLVELINREGVDTLHFVPSMLQAFLQDED-- 765 (5163)
T ss_pred -----CCCCCEEEeeCCeehHHHHHHHHHHHhCCCEEEECCccccCCHHHHHHHHHHcCCeEEEeCHHHHHHHHhccc--
Confidence 478999999999999999999999999999999984 3689999999999999999999999999987542
Q ss_pred CCCCCCeeEEEecCCCCCHHHHHHHHHhCCCCceeccccccccCCccccccCCCCCCCCCccccccCCceEEEEcCCCCc
Q 011116 248 KYDLSSLQLLGCGGAPLGKEVTLKFKEKFPNVEIRQGYGLTETGGAGSRVIGPDEAERHGSVGRLAELMEAKIVDPATGE 327 (493)
Q Consensus 248 ~~~l~~lr~v~~~Ge~~~~~~~~~~~~~~~~~~v~~~yG~tE~g~~~~~~~~~~~~~~~~~~g~p~~~~~~~i~d~~~~~ 327 (493)
...++++|.+++|||++++++.+.+.+.++++++++.||+||++..++............++|+|++|++++|+| ++++
T Consensus 766 ~~~~~~l~~~~~gGe~l~~~~~~~~~~~~~~~~l~n~YG~TE~~~~~~~~~~~~~~~~~~~iG~p~~~~~~~i~d-~~~~ 844 (5163)
T PRK12316 766 VASCTSLRRIVCSGEALPADAQEQVFAKLPQAGLYNLYGPTEAAIDVTHWTCVEEGGDSVPIGRPIANLACYILD-ANLE 844 (5163)
T ss_pred cccCCCccEEEEeeccCCHHHHHHHHHhCCCCeEEeCcCcChheeeeeEEecccccCCCCCCccccCCCEEEEEC-CCCC
Confidence 335788999999999999999999988888899999999999986554433323334556899999999999999 6689
Q ss_pred cCCCCCceEEEEeCccccccccCCccccccccc------CCCeeeccceEEEcCCCcEEEEcccCCeEEeCceeeChHHH
Q 011116 328 ALPPGQKGELWLRGPTIMKGYVGDDKATSETVH------SEGWLKTGDLCYFDSNGFLFIVDRLKELIKYKAYQVPPVEL 401 (493)
Q Consensus 328 ~~~~g~~Gel~v~~~~~~~gy~~~~~~~~~~~~------~~~~~~TgD~~~~~~~g~~~~~GR~~d~i~~~G~~i~~~~i 401 (493)
+++.|+.|||+|+|+.+++||+++++.+.+.|. .++||+|||+|++++||.++|.||.||+||++|++|+|.||
T Consensus 845 ~~p~G~~GEl~i~G~~v~~GYl~~~~~t~~~f~~~~~~~~~~~y~TGDl~~~~~dG~l~~~GR~d~~ik~~G~rI~~~EI 924 (5163)
T PRK12316 845 PVPVGVLGELYLAGRGLARGYHGRPGLTAERFVPSPFVAGERMYRTGDLARYRADGVIEYAGRIDHQVKLRGLRIELGEI 924 (5163)
T ss_pred CCCCCCceEEEecccccChhhCCChhhhhhhCCCCCCCCCCeeEecCccEEECCCCCEEeecccCCEEEEceEEcChHHH
Confidence 999999999999999999999999999988873 34699999999999999999999999999999999999999
Q ss_pred HHHHhcCCCcceEEEEeeeCCCCCeeEEEEEEeCCCCCCCHHHHHHHHHhcCCCCCCcceEEEeccccCCCCCccchHHH
Q 011116 402 EHLLHSNPEIADAAVIPYPDEEAGQIPMAFVVRKPGSNITEAEIMDFIAKQVAPYKKIRRVAFINSIPKSTAGKILRREL 481 (493)
Q Consensus 402 e~~l~~~~~v~~~~v~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~l~~~l~~~~~p~~~~~~~~lP~t~~GK~~r~~l 481 (493)
|.+|.++|+|.+++|++.+ ++.+++++++.++.....++++++++++|+.|++|..++++++||+|++||++|+.|
T Consensus 925 E~~l~~~p~V~~a~V~~~~----~~~lva~vv~~~~~~~~~~~l~~~l~~~Lp~y~vP~~i~~v~~lP~t~~GKidr~~L 1000 (5163)
T PRK12316 925 EARLLEHPWVREAAVLAVD----GKQLVGYVVLESEGGDWREALKAHLAASLPEYMVPAQWLALERLPLTPNGKLDRKAL 1000 (5163)
T ss_pred HHHHHhCCCcceEEEEEcC----CCeEEEEEEccCCCCCCHHHHHHHHHhhCCCccCCCeEEEHhhCCCCCCCChhHHhh
Confidence 9999999999999999875 668899999887666778899999999999999999999999999999999999999
Q ss_pred HHHH
Q 011116 482 VTHA 485 (493)
Q Consensus 482 ~~~~ 485 (493)
.+..
T Consensus 1001 ~~~~ 1004 (5163)
T PRK12316 1001 PAPE 1004 (5163)
T ss_pred cCcc
Confidence 8653
No 82
>PRK12476 putative fatty-acid--CoA ligase; Provisional
Probab=100.00 E-value=3.8e-61 Score=500.76 Aligned_cols=453 Identities=23% Similarity=0.370 Sum_probs=359.6
Q ss_pred hHHHHHHhhCCCCCCCEEEEECCCCCCcHHHHHHHHHHcCCeeccC-CCCCC--HHHHHHHHhhcCCeEEEEcCCCcccC
Q 011116 18 TLSHALSKRDSLCRKTTSLTSSPLPPSTSPVLYFSLLSLGVVISPA-NPLSS--TSEVSHQIQLSKPSIAFATSHTSYKL 94 (493)
Q Consensus 18 ~lA~~L~~~~gl~~gd~V~l~~~~~~~~~~~~~lA~~~~G~~~v~i-~~~~~--~~~l~~~l~~~~~~~il~~~~~~~~~ 94 (493)
++|++| .+. +++||+|+++++ |+++++++++||+++|++++|+ ++.++ .+++.++++.++++++++++.....+
T Consensus 80 ~lA~~L-~~~-~~~gd~V~l~~~-n~~e~~~~~lA~~~aG~v~vpl~~~~~~~~~~~l~~~l~~~~~~~li~~~~~~~~~ 156 (612)
T PRK12476 80 AVGARL-QQV-AGPGDRVAILAP-QGIDYVAGFFAAIKAGTIAVPLFAPELPGHAERLDTALRDAEPTVVLTTTAAAEAV 156 (612)
T ss_pred HHHHHH-HHh-cCCCCEEEEECC-CChhHHHHHHHHHHcCceeEecCCCCcchhHHHHHHHHHhCCCCEEEEcHHHHHHH
Confidence 459999 554 999999999999 9999999999999999999999 57766 78999999999999999987544322
Q ss_pred CC---------CCcEEEecCchhhhhhccCcccccccCCCCCCCCCCeEEEEccCCCCCCccceecchHHHHHHHHHhhh
Q 011116 95 PS---------NLRTILMDSPEFISLLNQNEDVADFANSNMTVYQSDPAAILYSSGTTGKVKGVLLSHLNVIAIIAGYYH 165 (493)
Q Consensus 95 ~~---------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~TSGTTG~pK~v~~t~~~~~~~~~~~~~ 165 (493)
.+ ...++.++.. ..... . ........++++++++|||||||.||||.++|+++..++.....
T Consensus 157 ~~~~~~~~~~~~~~~i~~~~~-----~~~~~---~-~~~~~~~~~~d~a~i~yTSGTTG~PKgV~~sh~~l~~~~~~~~~ 227 (612)
T PRK12476 157 EGFLRNLPRLRRPRVIAIDAI-----PDSAG---E-SFVPVELDTDDVSHLQYTSGSTRPPVGVEITHRAVGTNLVQMIL 227 (612)
T ss_pred HHHHhhcccccCceEEEeccc-----ccccc---c-cccCCCCCCCceEEEEeCCCCCCCCceEEeeHHHHHHHHHHHHH
Confidence 11 1123333211 00000 0 11112345789999999999999999999999999877665544
Q ss_pred hcccCCCCCCCCCCcEEEEecChhHHHHHHHHHHHHhcCCeEEEecC--C--CHHHHHHHHH--hcCeeecccChHHHHH
Q 011116 166 VTEETDPNEGPPPHPVSFFTLPMFHVFGFFMLVRAASKGETLVFMER--F--DFEKMLKAVE--NYRVTYMPVSPPLIVA 239 (493)
Q Consensus 166 ~~~~~~~~~~~~~~~~~~~~~pl~~~~g~~~~~~~l~~G~~~~~~~~--~--~~~~~~~~l~--~~~~t~l~~~P~~~~~ 239 (493)
.+.. +.+++++++.+|++|..|+...+.+++.|++.++..+ + ++..+++.++ +++++.+..+|+++..
T Consensus 228 ~~~~------~~~~~~~l~~~Pl~h~~g~~~~~~~~~~gg~~~~~~~~~~~~~p~~~~~~i~~~~~~~t~~~~~P~~~~~ 301 (612)
T PRK12476 228 SIDL------LDRNTHGVSWLPLYHDMGLSMIGFPAVYGGHSTLMSPTAFVRRPQRWIKALSEGSRTGRVVTAAPNFAYE 301 (612)
T ss_pred Hhcc------CCCCceEEEeCCcccccchHHHHHHHhcCCeEEEECHHHHHHHHHHHHHHHhhhccCCeEEEeCCcHHHH
Confidence 4420 3678999999999999999766666667777666642 2 7889999994 5899999999999888
Q ss_pred HHhccc----CCCCCCCCeeEEEecCCCCCHHHHHHHHHhCC-----CCceeccccccccCCccccccCCC---------
Q 011116 240 FINSKL----TDKYDLSSLQLLGCGGAPLGKEVTLKFKEKFP-----NVEIRQGYGLTETGGAGSRVIGPD--------- 301 (493)
Q Consensus 240 l~~~~~----~~~~~l~~lr~v~~~Ge~~~~~~~~~~~~~~~-----~~~v~~~yG~tE~g~~~~~~~~~~--------- 301 (493)
++.... ....+++++| +++||+++++++.+++.+.|+ ...+++.||+||++...+......
T Consensus 302 l~~~~~~~~~~~~~~l~~lr-~~~gg~~~~~~~~~~~~~~~~~~g~~~~~~~~~YG~TE~~~~~~~~~~~~~~~~~~~~~ 380 (612)
T PRK12476 302 WAAQRGLPAEGDDIDLSNVV-LIIGSEPVSIDAVTTFNKAFAPYGLPRTAFKPSYGIAEATLFVATIAPDAEPSVVYLDR 380 (612)
T ss_pred HHHHhcChhhhcCcchhHhe-EEecccCCCHHHHHHHHHHHHhcCCCccccccccchhhhheeeeccCCCCCceEEEEcH
Confidence 876421 1234578899 999999999999999999872 345999999999876543211100
Q ss_pred ----------------CCCCCCccccccCCceEEEEcCCCCccCCCCCceEEEEeCccccccccCCccccccccc-----
Q 011116 302 ----------------EAERHGSVGRLAELMEAKIVDPATGEALPPGQKGELWLRGPTIMKGYVGDDKATSETVH----- 360 (493)
Q Consensus 302 ----------------~~~~~~~~g~p~~~~~~~i~d~~~~~~~~~g~~Gel~v~~~~~~~gy~~~~~~~~~~~~----- 360 (493)
......++|+|+++++++|+|++++++++.|+.|||+++|+.++.||+++++.+.+.|.
T Consensus 381 ~~~~~g~~~~~~~~~~~~~~~~~~G~~~~g~~v~ivd~~~g~~~~~g~~GEl~v~g~~v~~GY~~~~~~t~~~f~~~~~~ 460 (612)
T PRK12476 381 EQLGAGRAVRVAADAPNAVAHVSCGQVARSQWAVIVDPDTGAELPDGEVGEIWLHGDNIGRGYWGRPEETERTFGAKLQS 460 (612)
T ss_pred HHhhCCCeeecCCCCCCcceeEeCCCcCCCCEEEEEeCCCCcCCCCCCEEEEEEcCCcccccccCChHHHHHHHhhhhcc
Confidence 00012478999999999999966699999999999999999999999999998888773
Q ss_pred -------------CCCeeeccceEEEcCCCcEEEEcccCCeEEeCceeeChHHHHHHHhc-CCCcce--EEEEeeeCCCC
Q 011116 361 -------------SEGWLKTGDLCYFDSNGFLFIVDRLKELIKYKAYQVPPVELEHLLHS-NPEIAD--AAVIPYPDEEA 424 (493)
Q Consensus 361 -------------~~~~~~TgD~~~~~~~g~~~~~GR~~d~i~~~G~~i~~~~ie~~l~~-~~~v~~--~~v~~~~~~~~ 424 (493)
.++||+|||+|++ +||++++.||.+|+||++|++|+|.+||++|.+ +|.|.+ +++++.+++.
T Consensus 461 ~~~~g~~~~~~~~~~~w~~TGDlg~~-~dG~l~i~GR~~d~I~~~G~~I~p~eIE~~l~~~~p~V~~~~v~v~~~~~~~- 538 (612)
T PRK12476 461 RLAEGSHADGAADDGTWLRTGDLGVY-LDGELYITGRIADLIVIDGRNHYPQDIEATVAEASPMVRRGYVTAFTVPAED- 538 (612)
T ss_pred ccccccccccccCCCCeeecccccee-ECCEEEEEeccCcEEEECCcccCHHHHHHHHHHhcccccCCcEEEEEecCCC-
Confidence 1359999999998 599999999999999999999999999999985 799999 6777777775
Q ss_pred CeeEEEEEEeCCCC-CCCHHHHHHHHHhcCC-CCCC-cceEEEec--cccCCCCCccchHHHHHHHhhCCCC
Q 011116 425 GQIPMAFVVRKPGS-NITEAEIMDFIAKQVA-PYKK-IRRVAFIN--SIPKSTAGKILRRELVTHAISGNLS 491 (493)
Q Consensus 425 ~~~~~~~v~~~~~~-~~~~~~l~~~l~~~l~-~~~~-p~~~~~~~--~lP~t~~GK~~r~~l~~~~~~~~~~ 491 (493)
++.+++++++.++. ..+.+++.+++++++. .+++ |..+.+++ +||+|++||++|+.|++++.++++.
T Consensus 539 ~~~~~~~v~~~~~~~~~~~~~l~~~~~~~l~~~~~~~p~~v~~v~~~~lP~t~~GKi~r~~L~~~~~~~~~~ 610 (612)
T PRK12476 539 NERLVIVAERAAGTSRADPAPAIDAIRAAVSRRHGLAVADVRLVPAGAIPRTTSGKLARRACRAQYLDGRLG 610 (612)
T ss_pred cceEEEEEEecCCcccccHHHHHHHHHHHHHHhhCCcceEEEEECCCCcCcCCchHHHHHHHHHHHHcCCCC
Confidence 78889999987764 3567888899988877 4777 57788886 6999999999999999999887753
No 83
>PRK08751 putative long-chain fatty acyl CoA ligase; Provisional
Probab=100.00 E-value=9.5e-60 Score=486.68 Aligned_cols=457 Identities=27% Similarity=0.423 Sum_probs=374.4
Q ss_pred hHHHHHHhhCCCCCCCEEEEECCCCCCcHHHHHHHHHHcCCeeccCCCCCCHHHHHHHHhhcCCeEEEEcCCCcccCCC-
Q 011116 18 TLSHALSKRDSLCRKTTSLTSSPLPPSTSPVLYFSLLSLGVVISPANPLSSTSEVSHQIQLSKPSIAFATSHTSYKLPS- 96 (493)
Q Consensus 18 ~lA~~L~~~~gl~~gd~V~l~~~~~~~~~~~~~lA~~~~G~~~v~i~~~~~~~~l~~~l~~~~~~~il~~~~~~~~~~~- 96 (493)
++|++|+.+.|+++||+|+++++ |+++++++++||+++|++++|++|.++.+++.+++++++++.+++++.....+.+
T Consensus 62 ~la~~L~~~~g~~~g~~V~i~~~-~~~~~~~~~lA~~~~G~~~v~l~p~~~~~~~~~~l~~~~~~~vi~~~~~~~~~~~~ 140 (560)
T PRK08751 62 QFAAYLLGELQLKKGDRVALMMP-NCLQYPIATFGVLRAGLTVVNVNPLYTPRELKHQLIDSGASVLVVIDNFGTTVQQV 140 (560)
T ss_pred HHHHHHHHHhCCCCCCEEEEECC-CCHHHHHHHHHHHHhCeEEeccCccCCHHHHHHHHHhcCCeEEEEcchhHHHHHHH
Confidence 45999944689999999999999 9999999999999999999999999999999999999999999998755432211
Q ss_pred ----CCc-EEEecC-------------------------------chhhhhhccCcccccccCCCCCCCCCCeEEEEccC
Q 011116 97 ----NLR-TILMDS-------------------------------PEFISLLNQNEDVADFANSNMTVYQSDPAAILYSS 140 (493)
Q Consensus 97 ----~~~-~~~~~~-------------------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~TS 140 (493)
... ++..+. ..+.+...... ...........+++++++|||
T Consensus 141 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~i~~TS 217 (560)
T PRK08751 141 IADTPVKQVITTGLGDMLGFPKAALVNFVVKYVKKLVPEYRINGAIRFREALALGR---KHSMPTLQIEPDDIAFLQYTG 217 (560)
T ss_pred hhCCCccEEEEechhhhcccccchhhhhhhhhhhccccccCCCccccHHHHHhccC---CCCCCCCCCCcccEEEEEcCC
Confidence 111 111110 00111111000 001112234568999999999
Q ss_pred CCCCCccceecchHHHHHHHHHhhhhcccCCCCCCCCC-CcEEEEecChhHHHHH-HHHHHHHhcCCeEEEe-cCCCHHH
Q 011116 141 GTTGKVKGVLLSHLNVIAIIAGYYHVTEETDPNEGPPP-HPVSFFTLPMFHVFGF-FMLVRAASKGETLVFM-ERFDFEK 217 (493)
Q Consensus 141 GTTG~pK~v~~t~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~pl~~~~g~-~~~~~~l~~G~~~~~~-~~~~~~~ 217 (493)
||||.||+|.++|.++..........+.... ...+ .+.++...|++|.+++ ...+.++..|++.++. ...++..
T Consensus 218 GTTG~PK~v~~s~~~l~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~ 294 (560)
T PRK08751 218 GTTGVAKGAMLTHRNLVANMQQAHQWLAGTG---KLEEGCEVVITALPLYHIFALTANGLVFMKIGGCNHLISNPRDMPG 294 (560)
T ss_pred CCCCCCCEEEEccHHHHHHHHHHHHhhcccc---ccCCCCceEEEecChHHHHHHHHhhhhHhhccceEEEecCcCCHHH
Confidence 9999999999999999877766544432100 0233 3567788999999998 3456667777777665 4568999
Q ss_pred HHHHHHhcCeeecccChHHHHHHHhcccCCCCCCCCeeEEEecCCCCCHHHHHHHHHhCCCCceeccccccccCCccccc
Q 011116 218 MLKAVENYRVTYMPVSPPLIVAFINSKLTDKYDLSSLQLLGCGGAPLGKEVTLKFKEKFPNVEIRQGYGLTETGGAGSRV 297 (493)
Q Consensus 218 ~~~~l~~~~~t~l~~~P~~~~~l~~~~~~~~~~l~~lr~v~~~Ge~~~~~~~~~~~~~~~~~~v~~~yG~tE~g~~~~~~ 297 (493)
+++.++++++|++.++|.++..+++.......+++++|.+++||+++++++.+.|++.+ ++.+++.||+||++..++.+
T Consensus 295 ~~~~i~~~~~t~~~~~p~~~~~l~~~~~~~~~~l~~lr~v~~gG~~~~~~~~~~~~~~~-~~~~~~~YG~tE~~~~~~~~ 373 (560)
T PRK08751 295 FVKELKKTRFTAFTGVNTLFNGLLNTPGFDQIDFSSLKMTLGGGMAVQRSVAERWKQVT-GLTLVEAYGLTETSPAACIN 373 (560)
T ss_pred HHHHHHhcceeEecChHHHHHHHHcCcCcCCcchhhheeeeeCCCCCCHHHHHHHHHHh-CCeEEEeeccccCCCceecc
Confidence 99999999999999999999999886655556678999999999999999999999988 88999999999998765542
Q ss_pred cCCCCCCCCCccccccCCceEEEEcCCCCccCCCCCceEEEEeCccccccccCCcccccccccCCCeeeccceEEEcCCC
Q 011116 298 IGPDEAERHGSVGRLAELMEAKIVDPATGEALPPGQKGELWLRGPTIMKGYVGDDKATSETVHSEGWLKTGDLCYFDSNG 377 (493)
Q Consensus 298 ~~~~~~~~~~~~g~p~~~~~~~i~d~~~~~~~~~g~~Gel~v~~~~~~~gy~~~~~~~~~~~~~~~~~~TgD~~~~~~~g 377 (493)
. .......+++|.|.++++++++| +++.+++.|+.|||+++|+.+.+||+++++.+.+.++.+|||+|||+++++++|
T Consensus 374 ~-~~~~~~~~~vG~~~~~~~v~i~d-~~~~~~~~g~~Gel~v~~~~~~~gy~~~~~~~~~~~~~~g~~~TGD~~~~~~~g 451 (560)
T PRK08751 374 P-LTLKEYNGSIGLPIPSTDACIKD-DAGTVLAIGEIGELCIKGPQVMKGYWKRPEETAKVMDADGWLHTGDIARMDEQG 451 (560)
T ss_pred c-ccccccCCCcCccCCCceEEEEC-CCCCCCCCCCceEEEEecCccchhhcCChhhhhhccccCCCccccceEEEcCCc
Confidence 2 22223456799999999999999 678899999999999999999999999999998888778999999999999999
Q ss_pred cEEEEcccCCeEEeCceeeChHHHHHHHhcCCCcceEEEEeeeCCCCCeeEEEEEEeCCCCCCCHHHHHHHHHhcCCCCC
Q 011116 378 FLFIVDRLKELIKYKAYQVPPVELEHLLHSNPEIADAAVIPYPDEEAGQIPMAFVVRKPGSNITEAEIMDFIAKQVAPYK 457 (493)
Q Consensus 378 ~~~~~GR~~d~i~~~G~~i~~~~ie~~l~~~~~v~~~~v~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~l~~~l~~~~ 457 (493)
.+++.||.+|+|+++|.+|+|.+||+.|..+++|.++++++.+++..++.+.++++.. +...+.+++++++++++++++
T Consensus 452 ~l~i~GR~~d~i~~~G~~v~p~eiE~~l~~~~~v~~~~v~~~~~~~~ge~~~~~v~~~-~~~~~~~~l~~~~~~~l~~~~ 530 (560)
T PRK08751 452 FVYIVDRKKDMILVSGFNVYPNEIEDVIAMMPGVLEVAAVGVPDEKSGEIVKVVIVKK-DPALTAEDVKAHARANLTGYK 530 (560)
T ss_pred eEEEEeechhheeECCEEEcHHHHHHHHHhCcCeeeeEEEecCCCCCCceEEEEEEcC-CCCCCHHHHHHHHHHhhhhcc
Confidence 9999999999999999999999999999999999999999998887788777777654 445677899999999999999
Q ss_pred CcceEEEeccccCCCCCccchHHHHHHH
Q 011116 458 KIRRVAFINSIPKSTAGKILRRELVTHA 485 (493)
Q Consensus 458 ~p~~~~~~~~lP~t~~GK~~r~~l~~~~ 485 (493)
+|..++++++||+|++||++|+.|++.+
T Consensus 531 ~P~~v~~v~~lP~t~~gKv~r~~L~~~~ 558 (560)
T PRK08751 531 QPRIIEFRKELPKTNVGKILRRELRDAA 558 (560)
T ss_pred CCeEEEEhhhCCCCccccccHHHHHHhh
Confidence 9999999999999999999999999873
No 84
>PRK12316 peptide synthase; Provisional
Probab=100.00 E-value=1.2e-60 Score=581.68 Aligned_cols=448 Identities=20% Similarity=0.279 Sum_probs=386.3
Q ss_pred HHHHHHhhCCCCCCCEEEEECCCCCCcHHHHHHHHHHcCCeeccCCCCCCHHHHHHHHhhcCCeEEEEcCCCcccCCC--
Q 011116 19 LSHALSKRDSLCRKTTSLTSSPLPPSTSPVLYFSLLSLGVVISPANPLSSTSEVSHQIQLSKPSIAFATSHTSYKLPS-- 96 (493)
Q Consensus 19 lA~~L~~~~gl~~gd~V~l~~~~~~~~~~~~~lA~~~~G~~~v~i~~~~~~~~l~~~l~~~~~~~il~~~~~~~~~~~-- 96 (493)
||++| .+.|+++|++|+++++ ++++++++++||+++|++++|++|.++.+++.++++.+++++++++++....+..
T Consensus 2041 lA~~L-~~~gv~~g~~V~l~~~-~s~~~~~~~lAil~aGa~~vpld~~~p~~rl~~il~~~~~~~vl~~~~~~~~~~~~~ 2118 (5163)
T PRK12316 2041 LAHRL-RARGVGPEVRVAIAAE-RSFELVVALLAVLKAGGAYVPLDPNYPAERLAYMLEDSGAALLLTQRHLLERLPLPA 2118 (5163)
T ss_pred HHHHH-HHcCCCCCCEEEEEeC-CCHHHHHHHHHHHhhceEEeecCCCCCHHHHHHHHHhcCCCEEEeChhhhhhccccc
Confidence 49999 7789999999999999 9999999999999999999999999999999999999999999999876655443
Q ss_pred CCcEEEecCchhhhhhccCcccccccCCCCCCCCCCeEEEEccCCCCCCccceecchHHHHHHHHHhhhhcccCCCCCCC
Q 011116 97 NLRTILMDSPEFISLLNQNEDVADFANSNMTVYQSDPAAILYSSGTTGKVKGVLLSHLNVIAIIAGYYHVTEETDPNEGP 176 (493)
Q Consensus 97 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~TSGTTG~pK~v~~t~~~~~~~~~~~~~~~~~~~~~~~~ 176 (493)
....+.++.. ... ... ..........+++++||+|||||||.||||.++|.++.+.+......+. +
T Consensus 2119 ~~~~~~~~~~--~~~-~~~----~~~~~~~~~~~~~~a~ii~TSGSTG~PKgV~~~h~~l~~~~~~~~~~~~-------~ 2184 (5163)
T PRK12316 2119 GVARLPLDRD--AEW-ADY----PDTAPAVQLAGENLAYVIYTSGSTGLPKGVAVSHGALVAHCQAAGERYE-------L 2184 (5163)
T ss_pred ccceEeccch--hhh-hcc----CccCCCCCCCCCCeEEEEeCccCCCCCCEeEEccHHHHHHHHHHHHhcC-------C
Confidence 2233333321 111 111 1111223457899999999999999999999999999998888777764 4
Q ss_pred CCCcEEEEecChhHHHHHHHHHHHHhcCCeEEEecC--CCHHHHHHHHHhcCeeecccChHHHHHHHhcccCCCCCCCCe
Q 011116 177 PPHPVSFFTLPMFHVFGFFMLVRAASKGETLVFMER--FDFEKMLKAVENYRVTYMPVSPPLIVAFINSKLTDKYDLSSL 254 (493)
Q Consensus 177 ~~~~~~~~~~pl~~~~g~~~~~~~l~~G~~~~~~~~--~~~~~~~~~l~~~~~t~l~~~P~~~~~l~~~~~~~~~~l~~l 254 (493)
.++++++...|++|..+.+.++.++..|+++++.+. .++..+++.++++++|++.++|++++.+.+...... ...++
T Consensus 2185 ~~~d~~l~~~~~~fd~~~~~~~~~L~~G~~~~~~~~~~~~~~~~~~~i~~~~vt~~~~~P~~~~~l~~~~~~~~-~~~~l 2263 (5163)
T PRK12316 2185 SPADCELQFMSFSFDGAHEQWFHPLLNGARVLIRDDELWDPEQLYDEMERHGVTILDFPPVYLQQLAEHAERDG-RPPAV 2263 (5163)
T ss_pred CCcceEEEecCchHHHHHHHHHHHHhCCCEEEeCCcccCCHHHHHHHHHHcCCeEEEcChHHHHHHHhhhhccc-CCcce
Confidence 889999999999999999999999999999977653 588999999999999999999999999987653322 23589
Q ss_pred eEEEecCCCCCHHHHHHHHHhCCCCceeccccccccCCccccccCCCCC---CCCCccccccCCceEEEEcCCCCccCCC
Q 011116 255 QLLGCGGAPLGKEVTLKFKEKFPNVEIRQGYGLTETGGAGSRVIGPDEA---ERHGSVGRLAELMEAKIVDPATGEALPP 331 (493)
Q Consensus 255 r~v~~~Ge~~~~~~~~~~~~~~~~~~v~~~yG~tE~g~~~~~~~~~~~~---~~~~~~g~p~~~~~~~i~d~~~~~~~~~ 331 (493)
|.+++|||++++++.++|.+.+++..+++.||+||++..++........ ....++|+|+++++++|+| +++++++.
T Consensus 2264 r~~~~gGe~l~~~~~~~~~~~~~~~~l~n~YG~TE~~~~~~~~~~~~~~~~~~~~~~iG~p~~~~~~~i~d-~~~~~vp~ 2342 (5163)
T PRK12316 2264 RVYCFGGEAVPAASLRLAWEALRPVYLFNGYGPTEAVVTPLLWKCRPQDPCGAAYVPIGRALGNRRAYILD-ADLNLLAP 2342 (5163)
T ss_pred eEEEEecccCCHHHHHHHHHhCCCcEEEECccchhheeeeeeeecccccccCCCcCCcccccCCCEEEEEC-CCCCCCCC
Confidence 9999999999999999999988789999999999998765542221111 1235799999999999999 67899999
Q ss_pred CCceEEEEeCccccccccCCcccccccccC-------CCeeeccceEEEcCCCcEEEEcccCCeEEeCceeeChHHHHHH
Q 011116 332 GQKGELWLRGPTIMKGYVGDDKATSETVHS-------EGWLKTGDLCYFDSNGFLFIVDRLKELIKYKAYQVPPVELEHL 404 (493)
Q Consensus 332 g~~Gel~v~~~~~~~gy~~~~~~~~~~~~~-------~~~~~TgD~~~~~~~g~~~~~GR~~d~i~~~G~~i~~~~ie~~ 404 (493)
|..|||+|+|+.+++||+++++.|.+.|.. ++||+|||+|++++||.++++||+||+||++|++|++.|||.+
T Consensus 2343 g~~GEl~i~G~~v~~GY~~~p~~T~~~f~~~~~~~~~~~~yrTGDl~~~~~dG~l~~~GR~d~~iki~G~rie~~eIE~~ 2422 (5163)
T PRK12316 2343 GMAGELYLGGEGLARGYLNRPGLTAERFVPDPFSASGERLYRTGDLARYRADGVVEYLGRIDHQVKIRGFRIELGEIEAR 2422 (5163)
T ss_pred CCeeEEEecchhhcccccCChhhhhhhccCCCCCCCCCeeEecccEEEEcCCCcEEEecCCCCeEEEcCccCChHHHHHH
Confidence 999999999999999999999999988842 4699999999999999999999999999999999999999999
Q ss_pred HhcCCCcceEEEEeeeCCCCCeeEEEEEEeCCCCCCCHHHHHHHHHhcCCCCCCcceEEEeccccCCCCCccchHHHHHH
Q 011116 405 LHSNPEIADAAVIPYPDEEAGQIPMAFVVRKPGSNITEAEIMDFIAKQVAPYKKIRRVAFINSIPKSTAGKILRRELVTH 484 (493)
Q Consensus 405 l~~~~~v~~~~v~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~l~~~l~~~~~p~~~~~~~~lP~t~~GK~~r~~l~~~ 484 (493)
|.++|+|.+++|++..++ .++.+++++++.++...+.++++++++++||.|++|..++++++||+|++||++|+.|++.
T Consensus 2423 l~~~~~v~~a~v~~~~~~-~~~~l~a~v~~~~~~~~~~~~l~~~l~~~Lp~~~vP~~~~~l~~lP~t~~GKidR~~L~~~ 2501 (5163)
T PRK12316 2423 LQAHPAVREAVVVAQDGA-SGKQLVAYVVPDDAAEDLLAELRAWLAARLPAYMVPAHWVVLERLPLNPNGKLDRKALPKP 2501 (5163)
T ss_pred HhhCcccceEEEEEEecC-CCeEEEEEEEecCCCccCHHHHHHHHHhhCchhcCcceEeeecccCCCCCCccCHhhcCCC
Confidence 999999999999988766 7788999999987777788999999999999999999999999999999999999999765
Q ss_pred H
Q 011116 485 A 485 (493)
Q Consensus 485 ~ 485 (493)
.
T Consensus 2502 ~ 2502 (5163)
T PRK12316 2502 D 2502 (5163)
T ss_pred c
Confidence 4
No 85
>PRK05851 long-chain-fatty-acid--[acyl-carrier-protein] ligase; Validated
Probab=100.00 E-value=1e-60 Score=489.12 Aligned_cols=444 Identities=20% Similarity=0.251 Sum_probs=344.2
Q ss_pred HHHHHHhhCCCCCCCEEEEECCCCCCcHHHHHHHHHHcCCeeccCCCC--------CCHHHHHHHHhhcCCeEEEEcCCC
Q 011116 19 LSHALSKRDSLCRKTTSLTSSPLPPSTSPVLYFSLLSLGVVISPANPL--------SSTSEVSHQIQLSKPSIAFATSHT 90 (493)
Q Consensus 19 lA~~L~~~~gl~~gd~V~l~~~~~~~~~~~~~lA~~~~G~~~v~i~~~--------~~~~~l~~~l~~~~~~~il~~~~~ 90 (493)
+|++| .+. ++||+|+++++ |+++++++++||+++|+++++ ++. ...+++.++++.+++++++++.+.
T Consensus 44 lA~~L-~~~--~~g~~V~l~~~-~~~e~~~~~la~~~~G~~~~~-~~~~~~~~~~~~~~~~~~~~l~~~~~~~vi~~~~~ 118 (525)
T PRK05851 44 VAARL-LDR--DRPGAVGLVGE-PTVELVAAIQGAWLAGAAVSI-LPGPVRGADDGRWADATLTRFAGIGVRTVLSHGSH 118 (525)
T ss_pred HHHHH-Hhc--CCCCeEEEEcC-CCHHHHHHHHHHHHcCCCCcC-CCCCCCccchhhHHHHHHHHHHhcCCCEEEeCHHH
Confidence 49999 544 89999999999 999999999999999998653 332 233556678899999999998765
Q ss_pred cccCCCCCcEEEecCchhhhhhccCcccccccCCCCCCCCCCeEEEEccCCCCCCccceecchHHHHHHHHHhhhhcccC
Q 011116 91 SYKLPSNLRTILMDSPEFISLLNQNEDVADFANSNMTVYQSDPAAILYSSGTTGKVKGVLLSHLNVIAIIAGYYHVTEET 170 (493)
Q Consensus 91 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~TSGTTG~pK~v~~t~~~~~~~~~~~~~~~~~~ 170 (493)
...+.+....+.+.+ +....... . ........++++++++|||||||.||+|.++|.++...+......+.
T Consensus 119 ~~~~~~~~~~~~~~~--~~~~~~~~----~-~~~~~~~~~~d~a~i~~TSGTTG~PKgV~~th~~~~~~~~~~~~~~~-- 189 (525)
T PRK05851 119 LERLRAVDSSVTVHD--LATAAHTN----R-SASLTPPDSGGPAVLQGTAGSTGTPRTAILSPGAVLSNLRGLNARVG-- 189 (525)
T ss_pred HHHHHHhhccccccc--cccccccc----c-cccCCCCCCCCeEEEEeCCCCCCCCcEEEecHHHHHHHHHHHHHHhC--
Confidence 433322111111111 11000000 0 00112246789999999999999999999999999988877766653
Q ss_pred CCCCCCC-CCcEEEEecChhHHHHHHHHHHHHhcCCeEEEecC--C--CHHHHHHHHHhcCeeecccChHHHHHHHhccc
Q 011116 171 DPNEGPP-PHPVSFFTLPMFHVFGFFMLVRAASKGETLVFMER--F--DFEKMLKAVENYRVTYMPVSPPLIVAFINSKL 245 (493)
Q Consensus 171 ~~~~~~~-~~~~~~~~~pl~~~~g~~~~~~~l~~G~~~~~~~~--~--~~~~~~~~l~~~~~t~l~~~P~~~~~l~~~~~ 245 (493)
.. ++|++++.+|++|.+++..++.++..|+++++.+. + ++..+++.++++++|++...|.++..+.....
T Consensus 190 -----~~~~~d~~l~~~pl~h~~g~~~~~~~l~~G~~~~~~~~~~~~~~~~~~~~~i~~~~~t~~~~p~~~~~~l~~~~~ 264 (525)
T PRK05851 190 -----LDAATDVGCSWLPLYHDMGLAFLLTAALAGAPLWLAPTTAFSASPFRWLSWLSDSRATLTAAPNFAYNLIGKYAR 264 (525)
T ss_pred -----CCCCCCeEEEcCCCccCccHHHHHHHHHcCCeEEEcCHHHHHHCHHHHHHHHHHhCCeEEeCCcHHHHHHHHhhc
Confidence 36 88999999999999999888899999999998753 3 57889999999999987554444444433221
Q ss_pred -CCCCCCCCeeEEEecCCCCCHHHHHHHHHh---C--CCCceeccccccccCCccccccCCC-------------CCCCC
Q 011116 246 -TDKYDLSSLQLLGCGGAPLGKEVTLKFKEK---F--PNVEIRQGYGLTETGGAGSRVIGPD-------------EAERH 306 (493)
Q Consensus 246 -~~~~~l~~lr~v~~~Ge~~~~~~~~~~~~~---~--~~~~v~~~yG~tE~g~~~~~~~~~~-------------~~~~~ 306 (493)
.....++++|.+++||+++++++.++|.+. + +...+++.||+||++.......... .....
T Consensus 265 ~~~~~~l~~lr~~~~gG~~l~~~~~~~~~~~~~~~g~~~~~~~~~YG~TE~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 344 (525)
T PRK05851 265 RVSDVDLGALRVALNGGEPVDCDGFERFATAMAPFGFDAGAAAPSYGLAESTCAVTVPVPGIGLRVDEVTTDDGSGARRH 344 (525)
T ss_pred cccCCCHHHhheeEeccccCCHHHHHHHHHHHhhcCCChhhcccccchhhhceEEEecCCCCCceeeeeccccCccccee
Confidence 223457899999999999999999998874 3 2245999999999976554321100 01234
Q ss_pred CccccccCCceEEEEcCCCCccCCCCCceEEEEeCccccccccCCcccccccccCCCeeeccceEEEcCCCcEEEEcccC
Q 011116 307 GSVGRLAELMEAKIVDPATGEALPPGQKGELWLRGPTIMKGYVGDDKATSETVHSEGWLKTGDLCYFDSNGFLFIVDRLK 386 (493)
Q Consensus 307 ~~~g~p~~~~~~~i~d~~~~~~~~~g~~Gel~v~~~~~~~gy~~~~~~~~~~~~~~~~~~TgD~~~~~~~g~~~~~GR~~ 386 (493)
.++|+|+++++++|+|++.+.+++.|+.|||+++|+.++.||+++++.+ .++||+|||+++++ +|.+++.||.|
T Consensus 345 ~~vG~p~~g~~v~i~d~~~~~~~~~g~~GEl~v~g~~~~~GY~~~~~~~-----~~~~~~TGDl~~~~-~G~l~~~GR~d 418 (525)
T PRK05851 345 AVLGNPIPGMEVRISPGDGAAGVAGREIGEIEIRGASMMSGYLGQAPID-----PDDWFPTGDLGYLV-DGGLVVCGRAK 418 (525)
T ss_pred eeecCCCCCcEEEEECCCCCccCCCCCeEEEEEecCchhhccccCCccC-----CCCceeccceEEEE-CCEEEEEeecC
Confidence 5799999999999999666667899999999999999999999988643 47899999999996 79999999999
Q ss_pred CeEEeCceeeChHHHHHHHhcCCCcceEEEEeeeCCCCCeeEEEEEEeCCCCCCCHHHHHHHHHhcCCCC--CCcceEEE
Q 011116 387 ELIKYKAYQVPPVELEHLLHSNPEIADAAVIPYPDEEAGQIPMAFVVRKPGSNITEAEIMDFIAKQVAPY--KKIRRVAF 464 (493)
Q Consensus 387 d~i~~~G~~i~~~~ie~~l~~~~~v~~~~v~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~l~~~l~~~--~~p~~~~~ 464 (493)
|+||++|++|+|.+||++|.++|+|.+++|++.+++..++.+.++++... ...+.+++.++++++++.+ ++|..+++
T Consensus 419 d~i~~~G~~v~p~eIE~~l~~~p~V~~~~vv~~~~~~~~~~~~~~v~~~~-~~~~~~~~~~~~~~~l~~~l~~~P~~~~~ 497 (525)
T PRK05851 419 ELITVAGRNIFPTEIERVAAQVRGVREGAVVAVGTGEGSARPGLVIAAEF-RGPDEAGARSEVVQRVASECGVVPSDVVF 497 (525)
T ss_pred CEEEECCEEeCHHHHHHHHHhCCCcccceEEEEEecCCCCceeEEEEEEe-cCcchHHHHHHHHHHHHHHhCCCccEEEE
Confidence 99999999999999999999999999999999988777776666665432 1234566777787777776 89999999
Q ss_pred ec--cccCCCCCccchHHHHHHHhhC
Q 011116 465 IN--SIPKSTAGKILRRELVTHAISG 488 (493)
Q Consensus 465 ~~--~lP~t~~GK~~r~~l~~~~~~~ 488 (493)
++ +||+|++||++|+.|++.+.+.
T Consensus 498 v~~~~lP~t~~GKi~r~~L~~~~~~~ 523 (525)
T PRK05851 498 VAPGSLPRTSSGKLRRLAVKRSLEAA 523 (525)
T ss_pred ECCCCcCcCcchHHHHHHHHHHHHhc
Confidence 98 8999999999999999998764
No 86
>TIGR02262 benz_CoA_lig benzoate-CoA ligase family. Characterized members of this protein family include benzoate-CoA ligase, 4-hydroxybenzoate-CoA ligase, 2-aminobenzoate-CoA ligase, etc. Members are related to fatty acid and acetate CoA ligases.
Probab=100.00 E-value=2.8e-59 Score=477.62 Aligned_cols=449 Identities=25% Similarity=0.372 Sum_probs=377.2
Q ss_pred hHHHHHHhhCCCCCCCEEEEECCCCCCcHHHHHHHHHHcCCeeccCCCCCCHHHHHHHHhhcCCeEEEEcCCCcccCCC-
Q 011116 18 TLSHALSKRDSLCRKTTSLTSSPLPPSTSPVLYFSLLSLGVVISPANPLSSTSEVSHQIQLSKPSIAFATSHTSYKLPS- 96 (493)
Q Consensus 18 ~lA~~L~~~~gl~~gd~V~l~~~~~~~~~~~~~lA~~~~G~~~v~i~~~~~~~~l~~~l~~~~~~~il~~~~~~~~~~~- 96 (493)
++|++| .+.|+++|++|+++++ |+++++++++||+++|++++|+++..+.+++.++++.++++++++++.....+.+
T Consensus 42 ~~a~~L-~~~g~~~g~~v~l~~~-~~~~~~~~~~a~~~~G~~~v~l~~~~~~~~l~~~~~~~~~~~~i~~~~~~~~~~~~ 119 (508)
T TIGR02262 42 RLGAAL-RRLGVKREERVLLLML-DGVDFPIAFLGAIRAGIVPVALNTLLTADDYAYMLEDSRARVVFVSGELLPVIKAA 119 (508)
T ss_pred HHHHHH-HHcCCCCCCEEEEECC-CCHHHHHHHHHHHHcCcEEeeccCCCCHHHHHHHHHhcCCeEEEEchhhHHHHHHH
Confidence 459999 6889999999999999 9999999999999999999999999999999999999999999998765443221
Q ss_pred ------CCcEEEecC-----chhhhhhccCcccccccCCCCCCCCCCeEEEEccCCCCCCccceecchHHHHHHHHHh-h
Q 011116 97 ------NLRTILMDS-----PEFISLLNQNEDVADFANSNMTVYQSDPAAILYSSGTTGKVKGVLLSHLNVIAIIAGY-Y 164 (493)
Q Consensus 97 ------~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~TSGTTG~pK~v~~t~~~~~~~~~~~-~ 164 (493)
....+..+. ..+.++..... . ........++++++++|||||||.||+|.++|.++...+... .
T Consensus 120 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~-~~~~~~~~~~~~a~i~~TSGTTG~PK~v~~s~~~~~~~~~~~~~ 195 (508)
T TIGR02262 120 LGKSPHLEHRVVVGRPEAGEVQLAELLATES---E-QFKPAATQADDPAFWLYSSGSTGMPKGVVHTHSNPYWTAELYAR 195 (508)
T ss_pred HhcCCCccEEEEeCCCCcccccHHHHhhcCC---C-ccCCCCCCCCCcEEEEeCCCCCCCCcEEEEechhHHHHHHHHhH
Confidence 112222222 12222222211 1 112234457899999999999999999999999998776652 2
Q ss_pred hhcccCCCCCCCCCCcEEEEecChhHHHHH-HHHHHHHhcCCeEEEec-CCCHHHHHHHHHhcCeeecccChHHHHHHHh
Q 011116 165 HVTEETDPNEGPPPHPVSFFTLPMFHVFGF-FMLVRAASKGETLVFME-RFDFEKMLKAVENYRVTYMPVSPPLIVAFIN 242 (493)
Q Consensus 165 ~~~~~~~~~~~~~~~~~~~~~~pl~~~~g~-~~~~~~l~~G~~~~~~~-~~~~~~~~~~l~~~~~t~l~~~P~~~~~l~~ 242 (493)
..+ +.+++++++...|++|..++ ..++.++..|+++++.+ ..++..+++.++++++|++.++|.++..++.
T Consensus 196 ~~~-------~~~~~d~~l~~~p~~~~~~~~~~~~~~l~~G~~~~~~~~~~~~~~~~~~i~~~~~t~~~~~P~~~~~~~~ 268 (508)
T TIGR02262 196 NTL-------GIREDDVVFSAAKLFFAYGLGNALTFPMSVGATTVLMGERPTPDAVFDRLRRHQPTIFYGVPTLYAAMLA 268 (508)
T ss_pred Hhc-------CCCCCCEEEEcCchHHHHHHHHHHHHHHHcCceEEEeCCCCCHHHHHHHHHHHCCcEEecchHHHHHHhc
Confidence 333 35789999999999999998 45777899999998875 4689999999999999999999999988876
Q ss_pred cccCCCCCCCCeeEEEecCCCCCHHHHHHHHHhCCCCceeccccccccCCccccccCCCCCCCCCccccccCCceEEEEc
Q 011116 243 SKLTDKYDLSSLQLLGCGGAPLGKEVTLKFKEKFPNVEIRQGYGLTETGGAGSRVIGPDEAERHGSVGRLAELMEAKIVD 322 (493)
Q Consensus 243 ~~~~~~~~l~~lr~v~~~Ge~~~~~~~~~~~~~~~~~~v~~~yG~tE~g~~~~~~~~~~~~~~~~~~g~p~~~~~~~i~d 322 (493)
..........++|.++++|+++++++.+.|.+.| ++++++.||+||++..+..+ .......+++|+|.+++.++++|
T Consensus 269 ~~~~~~~~~~~l~~~~~~G~~l~~~~~~~~~~~~-~~~v~~~YG~tE~~~~~~~~--~~~~~~~~~~G~~~~g~~v~i~d 345 (508)
T TIGR02262 269 DPNLPAEDQVRLRLCTSAGEALPAEVGQRWQARF-GVDIVDGIGSTEMLHIFLSN--LPGDVRYGTSGKPVPGYRLRLVG 345 (508)
T ss_pred CccccccccccceeEEEcCCCCCHHHHHHHHHHh-CCchhhCccccccCceeecC--CccCCCCCCcCCCCCCcEEEEEC
Confidence 5443334467899999999999999999999999 89999999999998755432 12223456899999999999999
Q ss_pred CCCCccCCCCCceEEEEeCccccccccCCcccccccccCCCeeeccceEEEcCCCcEEEEcccCCeEEeCceeeChHHHH
Q 011116 323 PATGEALPPGQKGELWLRGPTIMKGYVGDDKATSETVHSEGWLKTGDLCYFDSNGFLFIVDRLKELIKYKAYQVPPVELE 402 (493)
Q Consensus 323 ~~~~~~~~~g~~Gel~v~~~~~~~gy~~~~~~~~~~~~~~~~~~TgD~~~~~~~g~~~~~GR~~d~i~~~G~~i~~~~ie 402 (493)
+++.+++.|+.|||+++|+.++.||+++++.+...| .++||+|||+++++++|.+++.||.+|+++++|.++++.+||
T Consensus 346 -~~~~~~~~g~~Gel~i~~~~~~~gY~~~~~~~~~~~-~~~~~~TGD~~~~~~~g~~~~~gR~~d~i~~~G~~v~~~~ie 423 (508)
T TIGR02262 346 -DGGQDVAAGEPGELLISGPSSATMYWNNRAKTRDTF-QGEWTRSGDKYVRNDDGSYTYAGRTDDMLKVSGIYVSPFEIE 423 (508)
T ss_pred -CCCCCCCCCCeeEEEEecCccccccCCCHHHhHhhh-hcCceeccceEEEcCCccEEEeccccceeeeCCEEECHHHHH
Confidence 889999999999999999999999999999888877 479999999999999999999999999999999999999999
Q ss_pred HHHhcCCCcceEEEEeeeCCCCCeeEEEEEEeCCCC---CCCHHHHHHHHHhcCCCCCCcceEEEeccccCCCCCccchH
Q 011116 403 HLLHSNPEIADAAVIPYPDEEAGQIPMAFVVRKPGS---NITEAEIMDFIAKQVAPYKKIRRVAFINSIPKSTAGKILRR 479 (493)
Q Consensus 403 ~~l~~~~~v~~~~v~~~~~~~~~~~~~~~v~~~~~~---~~~~~~l~~~l~~~l~~~~~p~~~~~~~~lP~t~~GK~~r~ 479 (493)
+.|.++++|.++++++..+....+.+.+++++.++. ....+++.+++++++++++.|..+.+++++|+|++||++|+
T Consensus 424 ~~l~~~~~v~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~i~~~~~~~l~~~~~p~~i~~~~~iP~t~~gKi~r~ 503 (508)
T TIGR02262 424 SALIQHPAVLEAAVVGVEDEDGLIKPKAFIVLRPGQDIDTALETELKEHVKDRLAPYKYPRWIVFVDDLPKTATGKIQRF 503 (508)
T ss_pred HHHHhCCCeeEEEEEeccccCCCceeEEEEEeCCCCccccccHHHHHHHHHHhcccCCCCceEEEecCCCCCCCCcEehh
Confidence 999999999999999987776777888888876653 23467899999999999999999999999999999999999
Q ss_pred HHHHH
Q 011116 480 ELVTH 484 (493)
Q Consensus 480 ~l~~~ 484 (493)
.|+++
T Consensus 504 ~l~~~ 508 (508)
T TIGR02262 504 KLREG 508 (508)
T ss_pred hccCC
Confidence 98753
No 87
>PRK12467 peptide synthase; Provisional
Probab=100.00 E-value=1.7e-60 Score=572.06 Aligned_cols=453 Identities=21% Similarity=0.307 Sum_probs=384.9
Q ss_pred cchhhhHHHHHHhhCCCCCCCEEEEECCCCCCcHHHHHHHHHHcCCeeccCCCCCCHHHHHHHHhhcCCeEEEEcCCCcc
Q 011116 13 SSARFTLSHALSKRDSLCRKTTSLTSSPLPPSTSPVLYFSLLSLGVVISPANPLSSTSEVSHQIQLSKPSIAFATSHTSY 92 (493)
Q Consensus 13 ~~~~~~lA~~L~~~~gl~~gd~V~l~~~~~~~~~~~~~lA~~~~G~~~v~i~~~~~~~~l~~~l~~~~~~~il~~~~~~~ 92 (493)
+++++ |++| .+.|+++|++|+++++ ++++++++++||+++|++++|++|.++.+++.++++.+++++++++.....
T Consensus 1608 ~a~~l--A~~L-~~~Gv~~~~~V~l~~~-~s~~~vv~~lavlkaG~~~vpldp~~p~~rl~~il~~~~~~~~l~~~~~~~ 1683 (3956)
T PRK12467 1608 RANRL--AHRL-IALGVGPEVLVGIAVE-RSLEMVVGLLAILKAGGAYVPLDPEYPRERLAYMIEDSGIELLLTQSHLQA 1683 (3956)
T ss_pred HHHHH--HHHH-HHcCCCCCCEEEEEcc-CCHHHHHHHHHhhccCceeeecCCCCCHHHHHHHHHhCCCCEEEeChhhhh
Confidence 34555 9999 7889999999999999 999999999999999999999999999999999999999999999887655
Q ss_pred cCCC--CCcEEEecCchhhhhhccCcccccccCCCCCCCCCCeEEEEccCCCCCCccceecchHHHHHHHHHhhhhcccC
Q 011116 93 KLPS--NLRTILMDSPEFISLLNQNEDVADFANSNMTVYQSDPAAILYSSGTTGKVKGVLLSHLNVIAIIAGYYHVTEET 170 (493)
Q Consensus 93 ~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~TSGTTG~pK~v~~t~~~~~~~~~~~~~~~~~~ 170 (493)
.+.. ....+.++... ...... ..........+++++|++|||||||.||||.++|.++.+.+.+....+.
T Consensus 1684 ~~~~~~~~~~~~~~~~~--~~~~~~----~~~~~~~~~~~~~~ayiiyTSGSTG~PKGV~~th~~l~~~~~~~~~~~~-- 1755 (3956)
T PRK12467 1684 RLPLPDGLRSLVLDQED--DWLEGY----SDSNPAVNLAPQNLAYVIYTSGSTGRPKGAGNRHGALVNRLCATQEAYQ-- 1755 (3956)
T ss_pred hCccccCCcEEEecccc--chhccC----CCCCCCCCCCCcCcEEEEECCCcCCCCCEEEEcCHHHHHHHHHHHHhcC--
Confidence 5543 23344444321 111111 1112223456789999999999999999999999999998887777663
Q ss_pred CCCCCCCCCcEEEEecChhHHHHHHHHHHHHhcCCeEEEecC---CCHHHHHHHHHhcCeeecccChHHHHHHHhcccCC
Q 011116 171 DPNEGPPPHPVSFFTLPMFHVFGFFMLVRAASKGETLVFMER---FDFEKMLKAVENYRVTYMPVSPPLIVAFINSKLTD 247 (493)
Q Consensus 171 ~~~~~~~~~~~~~~~~pl~~~~g~~~~~~~l~~G~~~~~~~~---~~~~~~~~~l~~~~~t~l~~~P~~~~~l~~~~~~~ 247 (493)
+.++++++...|++|..+++.++.++..|+++++.+. .+++.+++.++++++|++.++|+++..|.+... .
T Consensus 1756 -----~~~~d~~l~~~~~~fd~~~~~~~~~L~~G~~lvi~~~~~~~~~~~l~~~i~~~~vt~~~~~Ps~~~~l~~~~~-~ 1829 (3956)
T PRK12467 1756 -----LSAADVVLQFTSFAFDVSVWELFWPLINGARLVIAPPGAHRDPEQLIQLIERQQVTTLHFVPSMLQQLLQMDE-Q 1829 (3956)
T ss_pred -----CCcccEEEEecCccHHHHHHHHHHHHhCCCEEEEcChhhcCCHHHHHHHHHHcCCeEEECCHHHHHHHHhhcc-c
Confidence 4789999999999999999999999999999999853 478999999999999999999999999987432 2
Q ss_pred CCCCCCeeEEEecCCCCCHHHHHHHHHhCCCCceeccccccccCCccccccCC---CCCCCCCccccccCCceEEEEcCC
Q 011116 248 KYDLSSLQLLGCGGAPLGKEVTLKFKEKFPNVEIRQGYGLTETGGAGSRVIGP---DEAERHGSVGRLAELMEAKIVDPA 324 (493)
Q Consensus 248 ~~~l~~lr~v~~~Ge~~~~~~~~~~~~~~~~~~v~~~yG~tE~g~~~~~~~~~---~~~~~~~~~g~p~~~~~~~i~d~~ 324 (493)
...++++|.+++|||++++++.+.|.+.+++..++|.||+||++..++..... .......++|+|+++++++|+| +
T Consensus 1830 ~~~~~~lr~v~~gGe~l~~~~~~~~~~~~~~~~l~n~YG~TE~t~~~t~~~~~~~~~~~~~~~~iG~p~~~~~~~vld-~ 1908 (3956)
T PRK12467 1830 VEHPLSLRRVVCGGEALEVEALRPWLERLPDTGLFNLYGPTETAVDVTHWTCRRKDLEGRDSVPIGQPIANLSTYILD-A 1908 (3956)
T ss_pred cccCCCceEEEEccccCCHHHHHHHHHhCCCCeEEeCccCCcCEEeEEEEeccccccccCCCCCcccccCCCEEEEEC-C
Confidence 34578899999999999999999999988788899999999998765542221 1122356899999999999999 7
Q ss_pred CCccCCCCCceEEEEeCccccccccCCcccccccccC-------CCeeeccceEEEcCCCcEEEEcccCCeEEeCceeeC
Q 011116 325 TGEALPPGQKGELWLRGPTIMKGYVGDDKATSETVHS-------EGWLKTGDLCYFDSNGFLFIVDRLKELIKYKAYQVP 397 (493)
Q Consensus 325 ~~~~~~~g~~Gel~v~~~~~~~gy~~~~~~~~~~~~~-------~~~~~TgD~~~~~~~g~~~~~GR~~d~i~~~G~~i~ 397 (493)
++++++.|..|||+++|+.+++||+++++.+.+.|.. .+||+|||++++++||.++|+||.||+||++|.+|+
T Consensus 1909 ~~~~vp~G~~GEl~i~G~~v~~GYl~~p~~t~~~f~~~p~~~~~~r~yrTGDl~~~~~dG~l~~~GR~D~qVki~G~rIe 1988 (3956)
T PRK12467 1909 SLNPVPIGVAGELYLGGVGLARGYLNRPALTAERFVADPFGTVGSRLYRTGDLARYRADGVIEYLGRIDHQVKIRGFRIE 1988 (3956)
T ss_pred CCCCCCCCCceEEEeccccccccccCChhhhhhhCcCCCCCCCCccceeccceEEECCCCCEEEecccCceEEeCeEEec
Confidence 7899999999999999999999999999999988732 359999999999999999999999999999999999
Q ss_pred hHHHHHHHhcCCCcceEEEEeeeCCCCCeeEEEEEEeCCCCCC--------CHHHHHHHHHhcCCCCCCcceEEEecccc
Q 011116 398 PVELEHLLHSNPEIADAAVIPYPDEEAGQIPMAFVVRKPGSNI--------TEAEIMDFIAKQVAPYKKIRRVAFINSIP 469 (493)
Q Consensus 398 ~~~ie~~l~~~~~v~~~~v~~~~~~~~~~~~~~~v~~~~~~~~--------~~~~l~~~l~~~l~~~~~p~~~~~~~~lP 469 (493)
+.|||.+|.++|+|.+++|++.. ...++.++++++...+... ..++++++++++||.|++|..++.++++|
T Consensus 1989 l~eIE~~l~~~p~V~~a~vv~~~-~~~~~~lva~vv~~~~~~~~~~~~~~~~~~~l~~~l~~~Lp~ymvP~~~~~l~~lP 2067 (3956)
T PRK12467 1989 LGEIEARLREQGGVREAVVIAQD-GANGKQLVAYVVPTDPGLVDDDEAQVALRAILKNHLKASLPEYMVPAHLVFLARMP 2067 (3956)
T ss_pred hHHHHHHHHhCCCcceEEEEEec-CCCCcEEEEEEEecCcccccccccccccHHHHHHHHHhhCchhhCchhhhhhhcCC
Confidence 99999999999999999999886 4456788999887654221 34679999999999999999999999999
Q ss_pred CCCCCccchHHHHHHH
Q 011116 470 KSTAGKILRRELVTHA 485 (493)
Q Consensus 470 ~t~~GK~~r~~l~~~~ 485 (493)
+|++||++|+.|.+..
T Consensus 2068 ~t~~GKidr~~L~~~~ 2083 (3956)
T PRK12467 2068 LTPNGKLDRKALPAPD 2083 (3956)
T ss_pred CCCCCCcchhhCCCCc
Confidence 9999999999997643
No 88
>PRK08279 long-chain-acyl-CoA synthetase; Validated
Probab=100.00 E-value=1.2e-59 Score=489.27 Aligned_cols=455 Identities=20% Similarity=0.279 Sum_probs=361.9
Q ss_pred hHHHHHHhhCCCCCCCEEEEECCCCCCcHHHHHHHHHHcCCeeccCCCCCCHHHHHHHHhhcCCeEEEEcCCCcccCCC-
Q 011116 18 TLSHALSKRDSLCRKTTSLTSSPLPPSTSPVLYFSLLSLGVVISPANPLSSTSEVSHQIQLSKPSIAFATSHTSYKLPS- 96 (493)
Q Consensus 18 ~lA~~L~~~~gl~~gd~V~l~~~~~~~~~~~~~lA~~~~G~~~v~i~~~~~~~~l~~~l~~~~~~~il~~~~~~~~~~~- 96 (493)
++|.+| .+.|+++||+|+++++ |+++++++++||+++|++++++++.++.+++.++++.+++++++++.+....+.+
T Consensus 74 ~la~~L-~~~g~~~gd~V~i~~~-n~~~~v~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~li~~~~~~~~~~~~ 151 (600)
T PRK08279 74 RYAHWA-AARGVGKGDVVALLME-NRPEYLAAWLGLAKLGAVVALLNTQQRGAVLAHSLNLVDAKHLIVGEELVEAFEEA 151 (600)
T ss_pred HHHHHH-HhcCCCCCCEEEEECC-CCHHHHHHHHHHHhcCcEEeecCCCCCHHHHHHHHHhcCCCEEEEChHHHHHHHHH
Confidence 459999 7789999999999999 9999999999999999999999999999999999999999999999865543321
Q ss_pred -----CCcEEEecC-------chhhhhhccCccccc-ccCCCCCCCCCCeEEEEccCCCCCCccceecchHHHHHHHHHh
Q 011116 97 -----NLRTILMDS-------PEFISLLNQNEDVAD-FANSNMTVYQSDPAAILYSSGTTGKVKGVLLSHLNVIAIIAGY 163 (493)
Q Consensus 97 -----~~~~~~~~~-------~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~i~~TSGTTG~pK~v~~t~~~~~~~~~~~ 163 (493)
....+.+.+ ..|.++......... ..........+++++++|||||||.||+|.++|.++..++...
T Consensus 152 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~il~TSGTTG~PKgV~~sh~~l~~~~~~~ 231 (600)
T PRK08279 152 RADLARPPRLWVAGGDTLDDPEGYEDLAAAAAGAPTTNPASRSGVTAKDTAFYIYTSGTTGLPKAAVMSHMRWLKAMGGF 231 (600)
T ss_pred hhhhcccceEEEecCccccccccHHHHhhhcccCCccCCCcccCCCccccEEEEEcCCCCCCCcEEEEeHHHHHHHHHHH
Confidence 111122211 122222221110000 0111233456899999999999999999999999999988887
Q ss_pred hhhcccCCCCCCCCCCcEEEEecChhHHHHHH-HHHHHHhcCCeEEEecCCCHHHHHHHHHhcCeeecccChHHHHHHHh
Q 011116 164 YHVTEETDPNEGPPPHPVSFFTLPMFHVFGFF-MLVRAASKGETLVFMERFDFEKMLKAVENYRVTYMPVSPPLIVAFIN 242 (493)
Q Consensus 164 ~~~~~~~~~~~~~~~~~~~~~~~pl~~~~g~~-~~~~~l~~G~~~~~~~~~~~~~~~~~l~~~~~t~l~~~P~~~~~l~~ 242 (493)
...+. +.++++++..+|++|.+++. .++.++..|+++++.+.+++..+++.++++++|++.++|++++.++.
T Consensus 232 ~~~~~-------l~~~d~~l~~~pl~h~~g~~~~~~~~l~~G~~~v~~~~~~~~~~~~~i~~~~~t~~~~~p~l~~~l~~ 304 (600)
T PRK08279 232 GGLLR-------LTPDDVLYCCLPLYHNTGGTVAWSSVLAAGATLALRRKFSASRFWDDVRRYRATAFQYIGELCRYLLN 304 (600)
T ss_pred HHhcC-------CCCCcEEEEecCchhhhhHHHHHHHHHhcCcEEEEcCCCCHHHHHHHHHHhcceEEeehHHHHHHHHh
Confidence 77663 48899999999999999985 55667888888888888899999999999999999999999999887
Q ss_pred cccCCCCCCCCeeEEEecCCCCCHHHHHHHHHhCCCCceeccccccccCCccccccCCCCCCCCCccccccC----CceE
Q 011116 243 SKLTDKYDLSSLQLLGCGGAPLGKEVTLKFKEKFPNVEIRQGYGLTETGGAGSRVIGPDEAERHGSVGRLAE----LMEA 318 (493)
Q Consensus 243 ~~~~~~~~l~~lr~v~~~Ge~~~~~~~~~~~~~~~~~~v~~~yG~tE~g~~~~~~~~~~~~~~~~~~g~p~~----~~~~ 318 (493)
..........++|.+ +|+.+++++.+++.+.|+...+++.||+||++...... .....++|.+.+ +..+
T Consensus 305 ~~~~~~~~~~~l~~~--~g~~l~~~~~~~~~~~~~~~~l~~~YG~tE~~~~~~~~-----~~~~~~~g~~~~~~~~~~~~ 377 (600)
T PRK08279 305 QPPKPTDRDHRLRLM--IGNGLRPDIWDEFQQRFGIPRILEFYAASEGNVGFINV-----FNFDGTVGRVPLWLAHPYAI 377 (600)
T ss_pred CCCCccccCcceeEE--ecCCCCHHHHHHHHHHhCcceeeeeecccccceeeccc-----CCCCccccccccccccccee
Confidence 654444445567654 47889999999999999655799999999987543221 123445666554 3333
Q ss_pred EEEcCCC--------C--ccCCCCCceEEE--EeCccccccccCCcccccccc------cCCCeeeccceEEEcCCCcEE
Q 011116 319 KIVDPAT--------G--EALPPGQKGELW--LRGPTIMKGYVGDDKATSETV------HSEGWLKTGDLCYFDSNGFLF 380 (493)
Q Consensus 319 ~i~d~~~--------~--~~~~~g~~Gel~--v~~~~~~~gy~~~~~~~~~~~------~~~~~~~TgD~~~~~~~g~~~ 380 (493)
...+.+. + ..++.|+.||++ +.++.++.|| +++..+...+ ..++||+|||+|++++||.++
T Consensus 378 ~~~~~~~~~~i~~~~~~~~~~~~g~~Gel~~~i~~~~~~~GY-~~~~~t~~~~~~~~~~~~~~~~~TGDlg~~~~dG~l~ 456 (600)
T PRK08279 378 VKYDVDTGEPVRDADGRCIKVKPGEVGLLIGRITDRGPFDGY-TDPEASEKKILRDVFKKGDAWFNTGDLMRDDGFGHAQ 456 (600)
T ss_pred eeeccCcCceeeCCCCccccCCCCCceeEEEEecCccccccc-CCchhhHHHHhhcccCCCCceEeecceEEEcCCccEE
Confidence 2222111 2 356789999998 6789999999 7777776554 235899999999999999999
Q ss_pred EEcccCCeEEeCceeeChHHHHHHHhcCCCcceEEEEeeeCCC-CCeeEEEEEEeCCCCCCCHHHHHHHHHhcCCCCCCc
Q 011116 381 IVDRLKELIKYKAYQVPPVELEHLLHSNPEIADAAVIPYPDEE-AGQIPMAFVVRKPGSNITEAEIMDFIAKQVAPYKKI 459 (493)
Q Consensus 381 ~~GR~~d~i~~~G~~i~~~~ie~~l~~~~~v~~~~v~~~~~~~-~~~~~~~~v~~~~~~~~~~~~l~~~l~~~l~~~~~p 459 (493)
+.||.+|+||++|++|+|.+||++|.++|+|.+|+|++++.+. .++..+++++..++...+.++++++++++|+.|++|
T Consensus 457 ~~GR~~d~ik~~G~~i~p~eIE~~l~~~p~V~~a~v~gv~~~~~~~~~~~~~vv~~~~~~~~~~~l~~~l~~~L~~~~~P 536 (600)
T PRK08279 457 FVDRLGDTFRWKGENVATTEVENALSGFPGVEEAVVYGVEVPGTDGRAGMAAIVLADGAEFDLAALAAHLYERLPAYAVP 536 (600)
T ss_pred EecccCCeEEECCcccCHHHHHHHHhcCCCcceEEEEEeecCCCCCccceeEEEecCCccCCHHHHHHHHHhhCccccCC
Confidence 9999999999999999999999999999999999999987654 344556666665555677899999999999999999
Q ss_pred ceEEEeccccCCCCCccchHHHHHHHhhCC
Q 011116 460 RRVAFINSIPKSTAGKILRRELVTHAISGN 489 (493)
Q Consensus 460 ~~~~~~~~lP~t~~GK~~r~~l~~~~~~~~ 489 (493)
..+++++++|+|++||++|+.|++++.++.
T Consensus 537 ~~i~~v~~lP~t~~GKi~r~~L~~~~~~~~ 566 (600)
T PRK08279 537 LFVRLVPELETTGTFKYRKVDLRKEGFDPS 566 (600)
T ss_pred eEEEeecCCCCCcchhhhHHHHhhcCCCcc
Confidence 999999999999999999999999888763
No 89
>PRK13390 acyl-CoA synthetase; Provisional
Probab=100.00 E-value=5.8e-60 Score=481.84 Aligned_cols=443 Identities=25% Similarity=0.348 Sum_probs=360.3
Q ss_pred HHHHHHhhCCCCCCCEEEEECCCCCCcHHHHHHHHHHcCCeeccCCCCCCHHHHHHHHhhcCCeEEEEcCCCcccCCC--
Q 011116 19 LSHALSKRDSLCRKTTSLTSSPLPPSTSPVLYFSLLSLGVVISPANPLSSTSEVSHQIQLSKPSIAFATSHTSYKLPS-- 96 (493)
Q Consensus 19 lA~~L~~~~gl~~gd~V~l~~~~~~~~~~~~~lA~~~~G~~~v~i~~~~~~~~l~~~l~~~~~~~il~~~~~~~~~~~-- 96 (493)
+|++| .+.|+++||+|+++++ |+++++++++||+++|++++|+++.++.+++.+++++++++.++++........+
T Consensus 37 la~~L-~~~gv~~gd~V~i~~~-n~~~~~~~~la~~~~Ga~~~~l~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~ 114 (501)
T PRK13390 37 LARVL-YDAGLRTGDVVALLSD-NSPEALVVLWAALRSGLYITAINHHLTAPEADYIVGDSGARVLVASAALDGLAAKVG 114 (501)
T ss_pred HHHHH-HHcCCCCCCEEEEEeC-CCHHHHHHHHHHHHhCCEEeccccCCCHHHHHHHHHhcCCcEEEEcchhhhHHHHhh
Confidence 59999 7889999999999999 9999999999999999999999999999999999999999999997653221111
Q ss_pred -CCcE-EEecC-----chhhhhhccCcccccccCCCCCCCCCCeEEEEccCCCCCCccceecc--hHHHHHHHH---H-h
Q 011116 97 -NLRT-ILMDS-----PEFISLLNQNEDVADFANSNMTVYQSDPAAILYSSGTTGKVKGVLLS--HLNVIAIIA---G-Y 163 (493)
Q Consensus 97 -~~~~-~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~TSGTTG~pK~v~~t--~~~~~~~~~---~-~ 163 (493)
.... +.+.. ..+....... ........++++++|||||||.||+|.++ |.++..... . .
T Consensus 115 ~~~~~~~~~~~~~~~~~~~~~~~~~~--------~~~~~~~~~~a~i~~TSGTTG~PKgV~~~~~~~~~~~~~~~~~~~~ 186 (501)
T PRK13390 115 ADLPLRLSFGGEIDGFGSFEAALAGA--------GPRLTEQPCGAVMLYSSGTTGFPKGIQPDLPGRDVDAPGDPIVAIA 186 (501)
T ss_pred hccceEEEecCcccccccHHHHhccc--------CCCCCCCcccEEEEeCCCCCCCCCEEEeeccccccccchhhhHhhH
Confidence 1111 11110 0111111110 00111233579999999999999999954 444433211 1 1
Q ss_pred hhhcccCCCCCCCCCCcEEEEecChhHHHHHHHHHHHHhcCCeEEEecCCCHHHHHHHHHhcCeeecccChHHHHHHHhc
Q 011116 164 YHVTEETDPNEGPPPHPVSFFTLPMFHVFGFFMLVRAASKGETLVFMERFDFEKMLKAVENYRVTYMPVSPPLIVAFINS 243 (493)
Q Consensus 164 ~~~~~~~~~~~~~~~~~~~~~~~pl~~~~g~~~~~~~l~~G~~~~~~~~~~~~~~~~~l~~~~~t~l~~~P~~~~~l~~~ 243 (493)
...+ .+..+++++..+|++|..++...+..+..|+++++.+.+++..+++.++++++|++.++|+++..++..
T Consensus 187 ~~~~-------~~~~~~~~~~~~p~~h~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~ 259 (501)
T PRK13390 187 RAFY-------DISESDIYYSSAPIYHAAPLRWCSMVHALGGTVVLAKRFDAQATLGHVERYRITVTQMVPTMFVRLLKL 259 (501)
T ss_pred HHHh-------CCCCCCeEEecccchhhhHHHHHHHHHhcCceEEEcCCcCHHHHHHHHHHcCCeEEEecHHHHHHHHhc
Confidence 1122 347889999999999999885445567789999988888999999999999999999999999998875
Q ss_pred ccC--CCCCCCCeeEEEecCCCCCHHHHHHHHHhCCCCceeccccccccCCccccccCCCCCCCCCccccccCCceEEEE
Q 011116 244 KLT--DKYDLSSLQLLGCGGAPLGKEVTLKFKEKFPNVEIRQGYGLTETGGAGSRVIGPDEAERHGSVGRLAELMEAKIV 321 (493)
Q Consensus 244 ~~~--~~~~l~~lr~v~~~Ge~~~~~~~~~~~~~~~~~~v~~~yG~tE~g~~~~~~~~~~~~~~~~~~g~p~~~~~~~i~ 321 (493)
... ....++++|.++++|+++++++.+.+++.+ +..+++.||+||++.+... .........+++|+|.++ .++++
T Consensus 260 ~~~~~~~~~~~~l~~v~~~g~~~~~~~~~~~~~~~-~~~~~~~YG~tE~~~~~~~-~~~~~~~~~~~~G~~~~g-~~~i~ 336 (501)
T PRK13390 260 DADVRTRYDVSSLRAVIHAAAPCPVDVKHAMIDWL-GPIVYEYYSSTEAHGMTFI-DSPDWLAHPGSVGRSVLG-DLHIC 336 (501)
T ss_pred cchhcccCChhhhheEEEcCCCCCHHHHHHHHHhc-CCceeeeecccccCceEEe-cchhhccCCCCcCCcccc-eEEEE
Confidence 432 234567899999999999999999999988 7889999999999865433 111112345789999999 79999
Q ss_pred cCCCCccCCCCCceEEEEeCccccccccCCcccccccccC--CCeeeccceEEEcCCCcEEEEcccCCeEEeCceeeChH
Q 011116 322 DPATGEALPPGQKGELWLRGPTIMKGYVGDDKATSETVHS--EGWLKTGDLCYFDSNGFLFIVDRLKELIKYKAYQVPPV 399 (493)
Q Consensus 322 d~~~~~~~~~g~~Gel~v~~~~~~~gy~~~~~~~~~~~~~--~~~~~TgD~~~~~~~g~~~~~GR~~d~i~~~G~~i~~~ 399 (493)
| +++++++.|+.|||+++|+.++.||+++++.+.+.+.. ++|++|||+++++++|.+++.||.||+||++|.+|+|.
T Consensus 337 d-~~~~~~~~g~~Gel~v~~~~~~~gy~~~~~~t~~~~~~~~~~w~~tGDl~~~~~dg~l~~~gR~~~~i~~~G~~v~p~ 415 (501)
T PRK13390 337 D-DDGNELPAGRIGTVYFERDRLPFRYLNDPEKTAAAQHPAHPFWTTVGDLGSVDEDGYLYLADRKSFMIISGGVNIYPQ 415 (501)
T ss_pred C-CCCCCCCCCCceEEEEecCCccccccCChhhhHHhhccCCCceEEcCceEEECCCCeEEEeeccccceeECCeeeCHH
Confidence 9 77899999999999999999999999999988887643 57999999999999999999999999999999999999
Q ss_pred HHHHHHhcCCCcceEEEEeeeCCCCCeeEEEEEEeCCCCCCC---HHHHHHHHHhcCCCCCCcceEEEeccccCCCCCcc
Q 011116 400 ELEHLLHSNPEIADAAVIPYPDEEAGQIPMAFVVRKPGSNIT---EAEIMDFIAKQVAPYKKIRRVAFINSIPKSTAGKI 476 (493)
Q Consensus 400 ~ie~~l~~~~~v~~~~v~~~~~~~~~~~~~~~v~~~~~~~~~---~~~l~~~l~~~l~~~~~p~~~~~~~~lP~t~~GK~ 476 (493)
+||++|.++|+|.++++++.+++..++.+++++++.++...+ .+++.++++++|+.+++|..+++++++|+|++||+
T Consensus 416 eIE~~l~~~~~v~~~~v~~~~~~~~~e~~~~~v~~~~~~~~~~~~~~~l~~~~~~~l~~~~~P~~~~~~~~iP~t~~GKi 495 (501)
T PRK13390 416 ETENALTMHPAVHDVAVIGVPDPEMGEQVKAVIQLVEGIRGSDELARELIDYTRSRIAHYKAPRSVEFVDELPRTPTGKL 495 (501)
T ss_pred HHHHHHHhCCCeeEEEEEeccCcccCceeEEEEEecCCCCcchhhHHHHHHHHHHhcccCCCCcEEEEeccCCCCCccce
Confidence 999999999999999999999988888999998887653322 46899999999999999999999999999999999
Q ss_pred chHHHH
Q 011116 477 LRRELV 482 (493)
Q Consensus 477 ~r~~l~ 482 (493)
+|+.||
T Consensus 496 ~r~~L~ 501 (501)
T PRK13390 496 VKGLLR 501 (501)
T ss_pred ehhhcC
Confidence 999885
No 90
>PRK04813 D-alanine--poly(phosphoribitol) ligase subunit 1; Provisional
Probab=100.00 E-value=5e-59 Score=475.76 Aligned_cols=452 Identities=23% Similarity=0.345 Sum_probs=378.8
Q ss_pred hHHHHHHhhCCCCCCCEEEEECCCCCCcHHHHHHHHHHcCCeeccCCCCCCHHHHHHHHhhcCCeEEEEcCCCcccCCCC
Q 011116 18 TLSHALSKRDSLCRKTTSLTSSPLPPSTSPVLYFSLLSLGVVISPANPLSSTSEVSHQIQLSKPSIAFATSHTSYKLPSN 97 (493)
Q Consensus 18 ~lA~~L~~~~gl~~gd~V~l~~~~~~~~~~~~~lA~~~~G~~~v~i~~~~~~~~l~~~l~~~~~~~il~~~~~~~~~~~~ 97 (493)
++|.+| .+.|+++||+|+++++ |+.+++++++||+++|++++|+++.++.+.+.++++..++++++++++... ....
T Consensus 39 ~~a~~l-~~~g~~~~~~v~~~~~-~~~~~~~~~~a~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~ 115 (503)
T PRK04813 39 ALAAFI-DSLKLPDKSPIIVFGH-MSPEMLATFLGAVKAGHAYIPVDVSSPAERIEMIIEVAKPSLIIATEELPL-EILG 115 (503)
T ss_pred HHHHHH-HHhCCCCCCEEEEEcC-CCHHHHHHHHHHHHcCCEEecCCCCChHHHHHHHHHhcCCCEEEecccccc-cccC
Confidence 469999 7789999999999999 999999999999999999999999999999999999999999999876521 1112
Q ss_pred CcEEEecCchhhhhhccCcccccccCCCCCCCCCCeEEEEccCCCCCCccceecchHHHHHHHHHhhhhcccCCCCCCCC
Q 011116 98 LRTILMDSPEFISLLNQNEDVADFANSNMTVYQSDPAAILYSSGTTGKVKGVLLSHLNVIAIIAGYYHVTEETDPNEGPP 177 (493)
Q Consensus 98 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~TSGTTG~pK~v~~t~~~~~~~~~~~~~~~~~~~~~~~~~ 177 (493)
...+..+ ++....... ..........++++++++|||||||.||+|.++|.++..........+. +.
T Consensus 116 ~~~~~~~--~~~~~~~~~----~~~~~~~~~~~~~~~~i~~TSGTTG~PK~v~~t~~~~~~~~~~~~~~~~-------~~ 182 (503)
T PRK04813 116 IPVITLD--ELKDIFATG----NPYDFDHAVKGDDNYYIIFTSGTTGKPKGVQISHDNLVSFTNWMLEDFA-------LP 182 (503)
T ss_pred CcEEehH--Hhhhhhhcc----ccccccccCCCCCcEEEEECCCCCCCCcEEEeehHHHHHHHHHHHHHcC-------CC
Confidence 2222221 122111111 1111223456788999999999999999999999999988777666653 47
Q ss_pred CCcEEEEecChhHHHHHHHHHHHHhcCCeEEEecC---CCHHHHHHHHHhcCeeecccChHHHHHHHhcccCCCCCCCCe
Q 011116 178 PHPVSFFTLPMFHVFGFFMLVRAASKGETLVFMER---FDFEKMLKAVENYRVTYMPVSPPLIVAFINSKLTDKYDLSSL 254 (493)
Q Consensus 178 ~~~~~~~~~pl~~~~g~~~~~~~l~~G~~~~~~~~---~~~~~~~~~l~~~~~t~l~~~P~~~~~l~~~~~~~~~~l~~l 254 (493)
.+++++...|++|..++..++.++..|+++++.+. .++..+++.+++++++++.++|+++..+..........++++
T Consensus 183 ~~~~~~~~~p~~~~~~~~~~~~~l~~g~~~v~~~~~~~~~~~~~~~~~~~~~~t~~~~~p~~~~~~~~~~~~~~~~~~~l 262 (503)
T PRK04813 183 EGPQFLNQAPYSFDLSVMDLYPTLASGGTLVALPKDMTANFKQLFETLPQLPINVWVSTPSFADMCLLDPSFNEEHLPNL 262 (503)
T ss_pred cCceeeecCCcchhHhHHHHHHHHhcCCEEEEcChhhhcCHHHHHHHHHHcCCeEEEeChHHHHHHHHhhccCcccCCCc
Confidence 88999999999999998888899999999998864 478999999999999999999999988766544445567899
Q ss_pred eEEEecCCCCCHHHHHHHHHhCCCCceeccccccccCCccccccCCC---CCCCCCccccccCCceEEEEcCCCCccCCC
Q 011116 255 QLLGCGGAPLGKEVTLKFKEKFPNVEIRQGYGLTETGGAGSRVIGPD---EAERHGSVGRLAELMEAKIVDPATGEALPP 331 (493)
Q Consensus 255 r~v~~~Ge~~~~~~~~~~~~~~~~~~v~~~yG~tE~g~~~~~~~~~~---~~~~~~~~g~p~~~~~~~i~d~~~~~~~~~ 331 (493)
|.++++|+++++.+.+++.+.|+++.+++.||+||++.......... ......++|+|.++++++|+| +++.+++.
T Consensus 263 ~~i~~~G~~l~~~~~~~~~~~~~~~~~~~~yG~tE~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~i~d-~~~~~~~~ 341 (503)
T PRK04813 263 THFLFCGEELPHKTAKKLLERFPSATIYNTYGPTEATVAVTSIEITDEMLDQYKRLPIGYAKPDSPLLIID-EEGTKLPD 341 (503)
T ss_pred eEEEEecCcCCHHHHHHHHHHCCCceEEeCcccchheeEEEEEEecccccccCCCCcccccCCCCEEEEEC-CCCCCCCC
Confidence 99999999999999999999998899999999999976544322211 123445799999999999999 77899999
Q ss_pred CCceEEEEeCccccccccCCccccccccc---CCCeeeccceEEEcCCCcEEEEcccCCeEEeCceeeChHHHHHHHhcC
Q 011116 332 GQKGELWLRGPTIMKGYVGDDKATSETVH---SEGWLKTGDLCYFDSNGFLFIVDRLKELIKYKAYQVPPVELEHLLHSN 408 (493)
Q Consensus 332 g~~Gel~v~~~~~~~gy~~~~~~~~~~~~---~~~~~~TgD~~~~~~~g~~~~~GR~~d~i~~~G~~i~~~~ie~~l~~~ 408 (493)
|+.|||+++|+.++.||+++++.+...|. +.+||+|||++++ ++|.+++.||.+|+|+.+|.++++.+||+.+.++
T Consensus 342 g~~Gel~v~~~~~~~gy~~~~~~~~~~~~~~~g~~~~~tGD~~~~-~~g~~~~~GR~~d~i~~~G~~v~~~~iE~~l~~~ 420 (503)
T PRK04813 342 GEQGEIVISGPSVSKGYLNNPEKTAEAFFTFDGQPAYHTGDAGYL-EDGLLFYQGRIDFQIKLNGYRIELEEIEQNLRQS 420 (503)
T ss_pred CCceEEEEeccccccccCCChhHhHHhhccCCCceeEECCceEEe-eCCeEEEeccccceEEECcEEeCHHHHHHHHHhC
Confidence 99999999999999999999988887762 2359999999999 9999999999999999999999999999999999
Q ss_pred CCcceEEEEeeeCCCCCeeEEEEEEeCCCCCCC----HHHHHHHHHhcCCCCCCcceEEEeccccCCCCCccchHHHHHH
Q 011116 409 PEIADAAVIPYPDEEAGQIPMAFVVRKPGSNIT----EAEIMDFIAKQVAPYKKIRRVAFINSIPKSTAGKILRRELVTH 484 (493)
Q Consensus 409 ~~v~~~~v~~~~~~~~~~~~~~~v~~~~~~~~~----~~~l~~~l~~~l~~~~~p~~~~~~~~lP~t~~GK~~r~~l~~~ 484 (493)
|+|.++++++.+++..++.+++++++.++.... ..+++++++++++.+++|+.+++++++|+|++||++|+.|+++
T Consensus 421 ~~v~~~~v~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~l~~~~~~~l~~~~~P~~i~~~~~~P~t~~gKv~r~~l~~~ 500 (503)
T PRK04813 421 SYVESAVVVPYNKDHKVQYLIAYVVPKEEDFEREFELTKAIKKELKERLMEYMIPRKFIYRDSLPLTPNGKIDRKALIEE 500 (503)
T ss_pred CCcceEEEEEeeCCCCccEEEEEEEeccccccccchhHHHHHHHHHhhCccccCCeEEEEeccCCCCCCCCCcHHHHHHH
Confidence 999999999987776778888888876542111 2468999999999999999999999999999999999999998
Q ss_pred Hhh
Q 011116 485 AIS 487 (493)
Q Consensus 485 ~~~ 487 (493)
+.+
T Consensus 501 ~~~ 503 (503)
T PRK04813 501 VNK 503 (503)
T ss_pred hcC
Confidence 753
No 91
>PRK08276 long-chain-fatty-acid--CoA ligase; Validated
Probab=100.00 E-value=1.5e-59 Score=478.96 Aligned_cols=456 Identities=26% Similarity=0.399 Sum_probs=378.2
Q ss_pred hHHHHHHhhCCCCCCCEEEEECCCCCCcHHHHHHHHHHcCCeeccCCCCCCHHHHHHHHhhcCCeEEEEcCCCcccCCC-
Q 011116 18 TLSHALSKRDSLCRKTTSLTSSPLPPSTSPVLYFSLLSLGVVISPANPLSSTSEVSHQIQLSKPSIAFATSHTSYKLPS- 96 (493)
Q Consensus 18 ~lA~~L~~~~gl~~gd~V~l~~~~~~~~~~~~~lA~~~~G~~~v~i~~~~~~~~l~~~l~~~~~~~il~~~~~~~~~~~- 96 (493)
++|++| .+.|+++||+|+++++ |+++++++++||+++|++++|+++.++.+++.+++++++++.+++++.....+.+
T Consensus 23 ~~a~~L-~~~g~~~~~~V~i~~~-~~~~~~~~~la~~~~G~~~~~l~~~~~~~~~~~~~~~~~~~~ii~~~~~~~~~~~~ 100 (502)
T PRK08276 23 RLAHGL-RALGLREGDVVAILLE-NNPEFFEVYWAARRSGLYYTPINWHLTAAEIAYIVDDSGAKVLIVSAALADTAAEL 100 (502)
T ss_pred HHHHHH-HHhCCCCCCEEEEEeC-CCHHHHHHHHHHHhcCcEEEecccccCHHHHHHHHhcCCCCEEEEccchhhHHHHH
Confidence 349999 7789999999999999 9999999999999999999999999999999999999999999998765554321
Q ss_pred ------CCcEEEecC------chhhhhhccCcccccccCCCCCCCCCCeEEEEccCCCCCCccceecchHHHHHHHH--H
Q 011116 97 ------NLRTILMDS------PEFISLLNQNEDVADFANSNMTVYQSDPAAILYSSGTTGKVKGVLLSHLNVIAIIA--G 162 (493)
Q Consensus 97 ------~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~TSGTTG~pK~v~~t~~~~~~~~~--~ 162 (493)
..+.+.+.. ..|.+..... ........++.++++|||||||.||+|.+++.+...... .
T Consensus 101 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~a~i~~TSGtTG~PK~v~~~~~~~~~~~~~~~ 173 (502)
T PRK08276 101 AAELPAGVPLLLVVAGPVPGFRSYEEALAAQ-------PDTPIADETAGADMLYSSGTTGRPKGIKRPLPGLDPDEAPGM 173 (502)
T ss_pred hhhccccccEEEEeCCCCCccccHHHHHhcC-------CCCCCCCCCcceEEEECCCCCCCCceEEEccCCcchhhhhHH
Confidence 222222221 1122222211 111123456789999999999999999988876653322 1
Q ss_pred hhhhcccCCCCCCCCCCcEEEEecChhHHHHHHHHHHHHhcCCeEEEecCCCHHHHHHHHHhcCeeecccChHHHHHHHh
Q 011116 163 YYHVTEETDPNEGPPPHPVSFFTLPMFHVFGFFMLVRAASKGETLVFMERFDFEKMLKAVENYRVTYMPVSPPLIVAFIN 242 (493)
Q Consensus 163 ~~~~~~~~~~~~~~~~~~~~~~~~pl~~~~g~~~~~~~l~~G~~~~~~~~~~~~~~~~~l~~~~~t~l~~~P~~~~~l~~ 242 (493)
....... .......+++++..|++|..++...+.++..|+++++.+..++..+++.++++++|++.++|+++..+++
T Consensus 174 ~~~~~~~---~~~~~~~~~~l~~~p~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~ 250 (502)
T PRK08276 174 MLALLGF---GMYGGPDSVYLSPAPLYHTAPLRFGMSALALGGTVVVMEKFDAEEALALIERYRVTHSQLVPTMFVRMLK 250 (502)
T ss_pred hhhhhhh---cccCCCCCEEEEcCcHHHHHHHHHHHHHHhccceEEEcCCCCHHHHHHHHHHhCCeEEEehHHHHHHHHh
Confidence 1111110 0112467889999999999998777789999999999888899999999999999999999999999987
Q ss_pred cccC--CCCCCCCeeEEEecCCCCCHHHHHHHHHhCCCCceeccccccccCCccccccCCCCCCCCCccccccCCceEEE
Q 011116 243 SKLT--DKYDLSSLQLLGCGGAPLGKEVTLKFKEKFPNVEIRQGYGLTETGGAGSRVIGPDEAERHGSVGRLAELMEAKI 320 (493)
Q Consensus 243 ~~~~--~~~~l~~lr~v~~~Ge~~~~~~~~~~~~~~~~~~v~~~yG~tE~g~~~~~~~~~~~~~~~~~~g~p~~~~~~~i 320 (493)
.... ...+++++|.++++|++++.++.+++.+.+ +..+++.||+||++.+.+.. ........+++|+|. +..+++
T Consensus 251 ~~~~~~~~~~~~~lr~i~~~g~~~~~~~~~~~~~~~-~~~~~~~yG~tE~~~~~~~~-~~~~~~~~~~~G~~~-~~~~~i 327 (502)
T PRK08276 251 LPEEVRARYDVSSLRVAIHAAAPCPVEVKRAMIDWW-GPIIHEYYASSEGGGVTVIT-SEDWLAHPGSVGKAV-LGEVRI 327 (502)
T ss_pred CccccCCCCCcccceEEEecCCCCCHHHHHHHHHHh-CcHhhhhcccccccceeEec-CccccccCCCcceec-ccEEEE
Confidence 6532 234578999999999999999999999998 78899999999998755432 111223456889999 889999
Q ss_pred EcCCCCccCCCCCceEEEEeCccccccccCCcccccccccCCCeeeccceEEEcCCCcEEEEcccCCeEEeCceeeChHH
Q 011116 321 VDPATGEALPPGQKGELWLRGPTIMKGYVGDDKATSETVHSEGWLKTGDLCYFDSNGFLFIVDRLKELIKYKAYQVPPVE 400 (493)
Q Consensus 321 ~d~~~~~~~~~g~~Gel~v~~~~~~~gy~~~~~~~~~~~~~~~~~~TgD~~~~~~~g~~~~~GR~~d~i~~~G~~i~~~~ 400 (493)
+| +++++++.|+.|||+++|+.+..||+++++.+...+..++||+|||+++++++|.+++.||.+|++|.+|.++++.+
T Consensus 328 ~d-~~~~~~~~g~~Gel~v~~~~~~~gy~~~~~~~~~~~~~~~~~~TGD~~~~~~~g~~~~~GR~~~~i~~~G~~v~~~~ 406 (502)
T PRK08276 328 LD-EDGNELPPGEIGTVYFEMDGYPFEYHNDPEKTAAARNPHGWVTVGDVGYLDEDGYLYLTDRKSDMIISGGVNIYPQE 406 (502)
T ss_pred EC-CCCCCCcCCCceEEEEECCCccchhcCCHHHHHHHhcCCCceeecceEEEcCCcCEEEeccCcceEEeCCEEeCHHH
Confidence 99 66889999999999999999999999999999998877799999999999999999999999999999999999999
Q ss_pred HHHHHhcCCCcceEEEEeeeCCCCCeeEEEEEEeCCCCCCCH---HHHHHHHHhcCCCCCCcceEEEeccccCCCCCccc
Q 011116 401 LEHLLHSNPEIADAAVIPYPDEEAGQIPMAFVVRKPGSNITE---AEIMDFIAKQVAPYKKIRRVAFINSIPKSTAGKIL 477 (493)
Q Consensus 401 ie~~l~~~~~v~~~~v~~~~~~~~~~~~~~~v~~~~~~~~~~---~~l~~~l~~~l~~~~~p~~~~~~~~lP~t~~GK~~ 477 (493)
||.+|.++|+|.++++++..++..++.+++++++.++...+. +++++.++++++.++.|..+++++++|+|++||++
T Consensus 407 iE~~i~~~~~v~~~~v~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~i~~~~~~~l~~~~~p~~i~~~~~lP~t~~GKi~ 486 (502)
T PRK08276 407 IENLLVTHPKVADVAVFGVPDEEMGERVKAVVQPADGADAGDALAAELIAWLRGRLAHYKCPRSIDFEDELPRTPTGKLY 486 (502)
T ss_pred HHHHHHhCCCcceEEEEeCCCcccCceEEEEEEECCCCCCChhhHHHHHHHHHhhccCCCCCcEEEEecCCCCCcccchh
Confidence 999999999999999999998888899999999876644333 47999999999999999999999999999999999
Q ss_pred hHHHHHHHhhCC
Q 011116 478 RRELVTHAISGN 489 (493)
Q Consensus 478 r~~l~~~~~~~~ 489 (493)
|+.|++.+....
T Consensus 487 r~~L~~~~~~~~ 498 (502)
T PRK08276 487 KRRLRDRYWEGR 498 (502)
T ss_pred HHHHHHHHHhhh
Confidence 999999977643
No 92
>PLN02387 long-chain-fatty-acid-CoA ligase family protein
Probab=100.00 E-value=5.9e-60 Score=495.65 Aligned_cols=452 Identities=21% Similarity=0.283 Sum_probs=351.0
Q ss_pred HHHHHHhhCCCCCCCEEEEECCCCCCcHHHHHHHHHHcCCeeccCCCCCCHHHHHHHHhhcCCeEEEEcCCCcccCCC--
Q 011116 19 LSHALSKRDSLCRKTTSLTSSPLPPSTSPVLYFSLLSLGVVISPANPLSSTSEVSHQIQLSKPSIAFATSHTSYKLPS-- 96 (493)
Q Consensus 19 lA~~L~~~~gl~~gd~V~l~~~~~~~~~~~~~lA~~~~G~~~v~i~~~~~~~~l~~~l~~~~~~~il~~~~~~~~~~~-- 96 (493)
+|++| .+.|+++||+|+++++ |+++|+++++||+++|++++|+++.++.+++.++++.++++++|++.+....+.+
T Consensus 119 lA~~L-~~lG~~~gd~Vai~~~-n~~e~~~~~lA~~~~G~v~vpl~~~~~~~~l~~il~~s~~~~li~~~~~~~~l~~~~ 196 (696)
T PLN02387 119 FASGL-VALGHNKEERVAIFAD-TRAEWLIALQGCFRQNITVVTIYASLGEEALCHSLNETEVTTVICDSKQLKKLIDIS 196 (696)
T ss_pred HHHHH-HHhCCCCCCEEEEEcC-CCHHHHHHHHHHHHcCCeEEEecCCCCHHHHHHHHHccCCCEEEECHHHHHHHHHHh
Confidence 49999 7889999999999999 9999999999999999999999999999999999999999999998754443221
Q ss_pred ----CC-cEEEecCch-----------------hhhhhccCcccccccCCCCCCCCCCeEEEEccCCCCCCccceecchH
Q 011116 97 ----NL-RTILMDSPE-----------------FISLLNQNEDVADFANSNMTVYQSDPAAILYSSGTTGKVKGVLLSHL 154 (493)
Q Consensus 97 ----~~-~~~~~~~~~-----------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~TSGTTG~pK~v~~t~~ 154 (493)
.+ .++.+++.. |.++..... ..........++|+++|+|||||||.||||+++|+
T Consensus 197 ~~~~~l~~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~dd~a~I~yTSGTTG~PKGV~lth~ 273 (696)
T PLN02387 197 SQLETVKRVIYMDDEGVDSDSSLSGSSNWTVSSFSEVEKLGK---ENPVDPDLPSPNDIAVIMYTSGSTGLPKGVMMTHG 273 (696)
T ss_pred hccCCceEEEEECCCCchhhhhhhccCCcEEEEHHHHHHhhc---cCCCCCCCCCccceEEEEecCCCCCCCCEEEEEcH
Confidence 12 244444311 222221111 00111223467999999999999999999999999
Q ss_pred HHHHHHHHhhhhcccCCCCCCCCCCcEEEEecChhHHHHHHHHHHHHhcCCeEEEecCCC--------HHHHHHHHHhcC
Q 011116 155 NVIAIIAGYYHVTEETDPNEGPPPHPVSFFTLPMFHVFGFFMLVRAASKGETLVFMERFD--------FEKMLKAVENYR 226 (493)
Q Consensus 155 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pl~~~~g~~~~~~~l~~G~~~~~~~~~~--------~~~~~~~l~~~~ 226 (493)
++...+......+. ++.++|++++.+|++|.+++...+.++..|+++.+..... ...++..+++++
T Consensus 274 ~l~~~~~~~~~~~~------~~~~~d~~l~~lPl~Hi~~~~~~~~~~~~g~~i~~g~~~~l~~~~~~~~~~~~~~i~~~~ 347 (696)
T PLN02387 274 NIVATVAGVMTVVP------KLGKNDVYLAYLPLAHILELAAESVMAAVGAAIGYGSPLTLTDTSNKIKKGTKGDASALK 347 (696)
T ss_pred HHHHHHHHHHhhcC------CCCCCCEEEEECcHHHHHHHHHHHHHHHhCCEEEECChhhhcccccccccCchhhHHHhC
Confidence 99988776554431 2478899999999999999976666788888877654321 134567889999
Q ss_pred eeecccChHHHHHHHhcccCC------------------------CC----------------------CC-CCeeEEEe
Q 011116 227 VTYMPVSPPLIVAFINSKLTD------------------------KY----------------------DL-SSLQLLGC 259 (493)
Q Consensus 227 ~t~l~~~P~~~~~l~~~~~~~------------------------~~----------------------~l-~~lr~v~~ 259 (493)
||++.++|.++..+.+..... .. .+ +++|.+++
T Consensus 348 pT~~~~vP~~l~~l~~~~~~~~~~~~~~~~~l~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lg~~lr~i~~ 427 (696)
T PLN02387 348 PTLMTAVPAILDRVRDGVRKKVDAKGGLAKKLFDIAYKRRLAAIEGSWFGAWGLEKLLWDALVFKKIRAVLGGRIRFMLS 427 (696)
T ss_pred CcEEEehhHHHHHHHHHHHHHHhcccHHHHHHHHHHHHHHHHHhccCCcccccccchhhHHHHHHHHHHHhCCcEEEEEE
Confidence 999999999999886532100 00 01 58999999
Q ss_pred cCCCCCHHHHHHHHHhCCCCceeccccccccCCccccccCCCCCCCCCccccccCCceEEEEcCCCCc-cC--CCCCceE
Q 011116 260 GGAPLGKEVTLKFKEKFPNVEIRQGYGLTETGGAGSRVIGPDEAERHGSVGRLAELMEAKIVDPATGE-AL--PPGQKGE 336 (493)
Q Consensus 260 ~Ge~~~~~~~~~~~~~~~~~~v~~~yG~tE~g~~~~~~~~~~~~~~~~~~g~p~~~~~~~i~d~~~~~-~~--~~g~~Ge 336 (493)
||+++++++.++++..+ ++++++.||+||+++.++.... .....+++|.|+++++++|+|.+++. .+ .++..||
T Consensus 428 GGapl~~~~~~~~~~~~-g~~v~~~YG~TEt~~~~~~~~~--~~~~~gsvG~p~p~~evkivd~~~~~~~~~~~~~p~GE 504 (696)
T PLN02387 428 GGAPLSGDTQRFINICL-GAPIGQGYGLTETCAGATFSEW--DDTSVGRVGPPLPCCYVKLVSWEEGGYLISDKPMPRGE 504 (696)
T ss_pred cCCCCCHHHHHHHHHHc-CCCeeEeechhhcccceeecCc--ccCCCCccCCCCCceEEEEeeccccCcccCCCCCCCce
Confidence 99999999998888888 8999999999999876554222 23356789999999999999954443 22 2345799
Q ss_pred EEEeCccccccccCCcccccccc--cCCC--eeeccceEEEcCCCcEEEEcccCCeEEe-CceeeChHHHHHHHhcCCCc
Q 011116 337 LWLRGPTIMKGYVGDDKATSETV--HSEG--WLKTGDLCYFDSNGFLFIVDRLKELIKY-KAYQVPPVELEHLLHSNPEI 411 (493)
Q Consensus 337 l~v~~~~~~~gy~~~~~~~~~~~--~~~~--~~~TgD~~~~~~~g~~~~~GR~~d~i~~-~G~~i~~~~ie~~l~~~~~v 411 (493)
|+++||.++.||+++++.+.+.| +.+| ||+|||+|++++||++++.||.+|+||+ +|++|+|.+||++|.++|.|
T Consensus 505 i~vrGp~v~~GY~~~pe~T~~~f~~d~~G~~W~~TGDig~~d~dG~l~i~gR~kd~ik~~~Ge~I~p~eIE~~l~~~p~V 584 (696)
T PLN02387 505 IVIGGPSVTLGYFKNQEKTDEVYKVDERGMRWFYTGDIGQFHPDGCLEIIDRKKDIVKLQHGEYVSLGKVEAALSVSPYV 584 (696)
T ss_pred EEeccCcccchhcCCHHHHhhhhccccCCCceeecCceEEECCCCcEEEEEcccceEECCCCeEEchHHHHHHHhcCCCe
Confidence 99999999999999999999987 3345 9999999999999999999999999998 79999999999999999999
Q ss_pred ceEEEEeeeCCCCCeeEEEEEEeCCCC--------C---CC----------HHHHHHHH-----HhcCCCCCCcceEEEe
Q 011116 412 ADAAVIPYPDEEAGQIPMAFVVRKPGS--------N---IT----------EAEIMDFI-----AKQVAPYKKIRRVAFI 465 (493)
Q Consensus 412 ~~~~v~~~~~~~~~~~~~~~v~~~~~~--------~---~~----------~~~l~~~l-----~~~l~~~~~p~~~~~~ 465 (493)
.+++|++.+. ...+++++++.+.. . .+ .+++.+.+ +++|+.+.+|++|.++
T Consensus 585 ~~~~V~g~~~---~~~~~a~vv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~~e~~~~i~l~ 661 (696)
T PLN02387 585 DNIMVHADPF---HSYCVALVVPSQQALEKWAKKAGIDYSNFAELCEKEEAVKEVQQSLSKAAKAARLEKFEIPAKIKLL 661 (696)
T ss_pred eEEEEEecCC---cceEEEEEEeCHHHHHHHHHHcCCCCCCHHHHhcCHHHHHHHHHHHHHHHHHcCCCCcceeeEEEEE
Confidence 9999998643 23577888875321 0 01 11222333 3369999999999888
Q ss_pred ccc------cCCCCCccchHHHHHHHhh
Q 011116 466 NSI------PKSTAGKILRRELVTHAIS 487 (493)
Q Consensus 466 ~~l------P~t~~GK~~r~~l~~~~~~ 487 (493)
++- -+|++.|+.|+.+++.+.+
T Consensus 662 ~~~~t~~~g~lT~t~K~~R~~i~~~y~~ 689 (696)
T PLN02387 662 PEPWTPESGLVTAALKLKREQIRKKFKD 689 (696)
T ss_pred CCCCCCCCCcCChhhhhhhHHHHHHHHH
Confidence 643 2688999999999998875
No 93
>PLN02479 acetate-CoA ligase
Probab=100.00 E-value=5.4e-59 Score=480.81 Aligned_cols=456 Identities=25% Similarity=0.386 Sum_probs=362.9
Q ss_pred HHHHHHhhCCCCCCCEEEEECCCCCCcHHHHHHHHHHcCCeeccCCCCCCHHHHHHHHhhcCCeEEEEcCCCcccCCC--
Q 011116 19 LSHALSKRDSLCRKTTSLTSSPLPPSTSPVLYFSLLSLGVVISPANPLSSTSEVSHQIQLSKPSIAFATSHTSYKLPS-- 96 (493)
Q Consensus 19 lA~~L~~~~gl~~gd~V~l~~~~~~~~~~~~~lA~~~~G~~~v~i~~~~~~~~l~~~l~~~~~~~il~~~~~~~~~~~-- 96 (493)
+|.+| .+.|+++||+|+++++ |+++++++++||+++|++++|+++.++.+++.++++.++++.+++++...+...+
T Consensus 58 lA~~L-~~~g~~~gd~V~i~~~-n~~~~~~~~la~~~~G~v~v~l~~~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~~~~ 135 (567)
T PLN02479 58 LASAL-AKRSIGPGSTVAVIAP-NIPAMYEAHFGVPMAGAVVNCVNIRLNAPTIAFLLEHSKSEVVMVDQEFFTLAEEAL 135 (567)
T ss_pred HHHHH-HHcCCCCCCEEEEECC-CcHHHHHHHHHHHhCCcEEEEeccccCHHHHHHHHhhcCceEEEEchhhhhHHHHHH
Confidence 49999 7789999999999999 9999999999999999999999999999999999999999999998765432110
Q ss_pred -----------CC-cEEEecCc----------------hhhhhhccCcccccccCCCCCCCCCCeEEEEccCCCCCCccc
Q 011116 97 -----------NL-RTILMDSP----------------EFISLLNQNEDVADFANSNMTVYQSDPAAILYSSGTTGKVKG 148 (493)
Q Consensus 97 -----------~~-~~~~~~~~----------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~TSGTTG~pK~ 148 (493)
.. ..+.+... .|.+++.... ...........+++++++|||||||.||+
T Consensus 136 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~i~yTSGTTG~PKg 212 (567)
T PLN02479 136 KILAEKKKSSFKPPLLIVIGDPTCDPKSLQYALGKGAIEYEKFLETGD---PEFAWKPPADEWQSIALGYTSGTTASPKG 212 (567)
T ss_pred HHHhhcccccCCCceEEEecCCcCCccccccccccCcccHHHHHhccc---cccccCCCCCcccceEEEECCCCCCCCcE
Confidence 00 12222111 1222222211 00011112233567889999999999999
Q ss_pred eecchHHHHHHHHHhhhhcccCCCCCCCCCCcEEEEecChhHHHHHHHHHH-HHhcCCeEEEecCCCHHHHHHHHHhcCe
Q 011116 149 VLLSHLNVIAIIAGYYHVTEETDPNEGPPPHPVSFFTLPMFHVFGFFMLVR-AASKGETLVFMERFDFEKMLKAVENYRV 227 (493)
Q Consensus 149 v~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pl~~~~g~~~~~~-~l~~G~~~~~~~~~~~~~~~~~l~~~~~ 227 (493)
|.++|.++..........+ ++.+++++++.+|++|..++...+. ++..|.+ +....+++..+++.++++++
T Consensus 213 V~~sh~~~~~~~~~~~~~~-------~~~~~~~~~~~~p~~h~~~~~~~~~~~~~~g~~-~~~~~~~~~~~~~~l~~~~~ 284 (567)
T PLN02479 213 VVLHHRGAYLMALSNALIW-------GMNEGAVYLWTLPMFHCNGWCFTWTLAALCGTN-ICLRQVTAKAIYSAIANYGV 284 (567)
T ss_pred EEeccHHHHHHHHHHHhhc-------CCCCCCEEEEecchhhhhhHHHHHHHHhhcCce-EeccCCCHHHHHHHHHHcCC
Confidence 9999999876554444443 3478899999999999999854443 4555554 44566789999999999999
Q ss_pred eecccChHHHHHHHhcccCCC-CCCCCeeEEEecCCCCCHHHHHHHHHhCCCCceeccccccccCCccccccCCC-----
Q 011116 228 TYMPVSPPLIVAFINSKLTDK-YDLSSLQLLGCGGAPLGKEVTLKFKEKFPNVEIRQGYGLTETGGAGSRVIGPD----- 301 (493)
Q Consensus 228 t~l~~~P~~~~~l~~~~~~~~-~~l~~lr~v~~~Ge~~~~~~~~~~~~~~~~~~v~~~yG~tE~g~~~~~~~~~~----- 301 (493)
|++..+|+++..|.+...... ..+++++.++++|+++++++.+++.+. +.++++.||+||+++....+....
T Consensus 285 t~~~~~P~~~~~l~~~~~~~~~~~~~~l~~~~~~G~~~~~~~~~~~~~~--~~~~~~~yG~tE~~~~~~~~~~~~~~~~~ 362 (567)
T PLN02479 285 THFCAAPVVLNTIVNAPKSETILPLPRVVHVMTAGAAPPPSVLFAMSEK--GFRVTHTYGLSETYGPSTVCAWKPEWDSL 362 (567)
T ss_pred eEEEecHHHHHHHHhhhhhcccccccceeEEEEcCCCCCHHHHHHHHhc--CCceecccccccccccccceecccccccc
Confidence 999999999999987653322 256889999999999999999999875 789999999999865433221100
Q ss_pred ----CCCCCCccccccCCce-EEEEcCCCCccCCCC--CceEEEEeCccccccccCCcccccccccCCCeeeccceEEEc
Q 011116 302 ----EAERHGSVGRLAELME-AKIVDPATGEALPPG--QKGELWLRGPTIMKGYVGDDKATSETVHSEGWLKTGDLCYFD 374 (493)
Q Consensus 302 ----~~~~~~~~g~p~~~~~-~~i~d~~~~~~~~~g--~~Gel~v~~~~~~~gy~~~~~~~~~~~~~~~~~~TgD~~~~~ 374 (493)
........|.+.++.. ++++|++++++++.+ +.|||+++|+.++.||+++++.+.+.| .++||+|||+++++
T Consensus 363 ~~~~~~~~~~~~g~~~~g~~~~~i~d~~~~~~~~~~g~~~GEl~v~g~~~~~GY~~~~~~t~~~~-~~g~~~TGDl~~~~ 441 (567)
T PLN02479 363 PPEEQARLNARQGVRYIGLEGLDVVDTKTMKPVPADGKTMGEIVMRGNMVMKGYLKNPKANEEAF-ANGWFHSGDLGVKH 441 (567)
T ss_pred CcccccccccccCCCcCCcCceeEEcCCCCcccCCCCCCceEEEEeccchhhhhhcCcccccchh-cCCceecceeEEEc
Confidence 0011234677777775 789987778888754 679999999999999999999999888 48999999999999
Q ss_pred CCCcEEEEcccCCeEEeCceeeChHHHHHHHhcCCCcceEEEEeeeCCCCCeeEEEEEEeCCCCC-----CCHHHHHHHH
Q 011116 375 SNGFLFIVDRLKELIKYKAYQVPPVELEHLLHSNPEIADAAVIPYPDEEAGQIPMAFVVRKPGSN-----ITEAEIMDFI 449 (493)
Q Consensus 375 ~~g~~~~~GR~~d~i~~~G~~i~~~~ie~~l~~~~~v~~~~v~~~~~~~~~~~~~~~v~~~~~~~-----~~~~~l~~~l 449 (493)
++|.+++.||.+|+|+.+|.+|++.+||.+|.++|.|.+++|++..++..++.+++++++.++.. ...+++++++
T Consensus 442 ~~g~l~~~GR~~d~i~~~G~~v~~~eIE~~l~~~~~v~~~~v~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~l~~~~ 521 (567)
T PLN02479 442 PDGYIEIKDRSKDIIISGGENISSLEVENVVYTHPAVLEASVVARPDERWGESPCAFVTLKPGVDKSDEAALAEDIMKFC 521 (567)
T ss_pred CCccEEEeccccceEEeCCEEEcHHHHHHHHHhCcccceeeEEeccchhcCceeEEEEEecCcccccchhhhHHHHHHHH
Confidence 99999999999999999999999999999999999999999999988777888999998876532 3347899999
Q ss_pred HhcCCCCCCcceEEEeccccCCCCCccchHHHHHHHhhCCCC
Q 011116 450 AKQVAPYKKIRRVAFINSIPKSTAGKILRRELVTHAISGNLS 491 (493)
Q Consensus 450 ~~~l~~~~~p~~~~~~~~lP~t~~GK~~r~~l~~~~~~~~~~ 491 (493)
+++++++++|+.+.+ +++|+|++||++|+.|++.+.++.++
T Consensus 522 ~~~l~~~~~P~~~~~-~~iP~t~~gKv~r~~L~~~~~~~~~~ 562 (567)
T PLN02479 522 RERLPAYWVPKSVVF-GPLPKTATGKIQKHVLRAKAKEMGPV 562 (567)
T ss_pred HhhcccccCCceEEe-ccCCCCCccCeeHHHHHHHHHhhCCc
Confidence 999999999998766 78999999999999999998886654
No 94
>TIGR03205 pimA dicarboxylate--CoA ligase PimA. PimA, a member of a large family of acyl-CoA ligases, is found in a characteristic operon pimFABCDE for the metabolism of pimelate and related compounds. It is found, so far, in Bradyrhizobium japonicum and several strains of Rhodopseudomonas palustris. PimA from R. palustris was shown to be active as a CoA ligase for C(7) to C(14) dicarboxylates and fatty acids.
Probab=100.00 E-value=1.1e-58 Score=476.56 Aligned_cols=454 Identities=28% Similarity=0.493 Sum_probs=370.6
Q ss_pred hHHHHHHhhCCCCCCCEEEEECCCCCCcHHHHHHHHHHcCCeeccCCCCCCHHHHHHHHhhcCCeEEEEcCCCc--ccC-
Q 011116 18 TLSHALSKRDSLCRKTTSLTSSPLPPSTSPVLYFSLLSLGVVISPANPLSSTSEVSHQIQLSKPSIAFATSHTS--YKL- 94 (493)
Q Consensus 18 ~lA~~L~~~~gl~~gd~V~l~~~~~~~~~~~~~lA~~~~G~~~v~i~~~~~~~~l~~~l~~~~~~~il~~~~~~--~~~- 94 (493)
++|.+| .+.|+++||+|+++++ |+++++++++||+++|++++|++|..+.+++.++++.++++.+++++... ...
T Consensus 58 ~~a~~L-~~~gi~~g~~V~i~~~-~~~~~~~~~la~~~~G~~~v~l~~~~~~~~l~~~i~~~~~~~vi~~~~~~~~~~~~ 135 (541)
T TIGR03205 58 TAAAAL-LRAGYGKDASVALYLG-NTPDHPINFFGALKAGARVVHLSPLDGERALSHKLSDSGARLLITSDLAALLPMAL 135 (541)
T ss_pred HHHHHH-HHcCCCCCCEEEEECC-CChHHHHHHHHHHhcCeEEEecCCCCCHHHHHHHHhhcCceEEEEeCchhhhHHHH
Confidence 359999 7789999999999999 99999999999999999999999999999999999999999999975311 000
Q ss_pred ---CC-CC-cEEEecCch-------------------hhhhhccCcccccccCCCCCCCCCCeEEEEccCCCCCCcccee
Q 011116 95 ---PS-NL-RTILMDSPE-------------------FISLLNQNEDVADFANSNMTVYQSDPAAILYSSGTTGKVKGVL 150 (493)
Q Consensus 95 ---~~-~~-~~~~~~~~~-------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~TSGTTG~pK~v~ 150 (493)
.. .. ..+.++... +.++.... ..........++++++++|||||||.||+|.
T Consensus 136 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~i~~TSGTTG~PK~v~ 211 (541)
T TIGR03205 136 KFLEKGLLDRLIVCEDDNWGKVGTPQAPIPADPRIVTYADFVKGA----AAPAEWPAVTPDDVALLQYTGGTTGLPKGAM 211 (541)
T ss_pred HhhhcccceEEEEecccccccccccccccCCCcccccHHHHHhcC----CCCCCCCCCCccCeEEEEECCCCCCCCcEEE
Confidence 00 01 122222111 11111110 0011122345789999999999999999999
Q ss_pred cchHHHHHHHHHhhhhcccCCCCCCCCCCcEEEEecChhHHHHH-HHHHHHHhcCCeEEEecCCCHHHHHHHHHhcCeee
Q 011116 151 LSHLNVIAIIAGYYHVTEETDPNEGPPPHPVSFFTLPMFHVFGF-FMLVRAASKGETLVFMERFDFEKMLKAVENYRVTY 229 (493)
Q Consensus 151 ~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pl~~~~g~-~~~~~~l~~G~~~~~~~~~~~~~~~~~l~~~~~t~ 229 (493)
++|.++....... ..+.. .........+++++..|++|.+++ ..++.++..|+++++....+++.+++.++++++|+
T Consensus 212 ~s~~~l~~~~~~~-~~~~~-~~~~~~~~~~~~l~~~p~~~~~~~~~~~~~~l~~g~~~~~~~~~~~~~~~~~i~~~~~t~ 289 (541)
T TIGR03205 212 LTHGNLTSAVSIY-DVWGK-PSRATRGDVERVICVLPLFHIYALTVILLRSLRRGDLISLHQRFDVAAVFRDIEEKRATV 289 (541)
T ss_pred EeHHHHHHHHHHH-Hhhcc-cccccCCCCceEEEeccHHHHHHHHHHHHHHHhcCCEEEecCCCCHHHHHHHHHHcCCeE
Confidence 9999987654322 22111 000111345789999999999887 55788899999998888889999999999999999
Q ss_pred cccChHHHHHHHhcccCCCCCCCCeeEEEecCCCCCHHHHHHHHHhCCCCceeccccccccCCccccccCCCCCCCCCcc
Q 011116 230 MPVSPPLIVAFINSKLTDKYDLSSLQLLGCGGAPLGKEVTLKFKEKFPNVEIRQGYGLTETGGAGSRVIGPDEAERHGSV 309 (493)
Q Consensus 230 l~~~P~~~~~l~~~~~~~~~~l~~lr~v~~~Ge~~~~~~~~~~~~~~~~~~v~~~yG~tE~g~~~~~~~~~~~~~~~~~~ 309 (493)
+.++|+++..+++........++++|.+++||+++++++.+++.+.+ +.++++.||+||++..++.+.. .......++
T Consensus 290 ~~~~P~~~~~l~~~~~~~~~~~~~l~~i~~gg~~~~~~~~~~~~~~~-~~~~~~~YG~TE~~~~~~~~~~-~~~~~~~~~ 367 (541)
T TIGR03205 290 FPGVPTMWIALANDPSLEKRDLSSLATIGSGGAPLPVEVANFFERKT-GLKLKSGWGMTETCSPGTGHPP-EGPDKPGSI 367 (541)
T ss_pred eechHHHHHHHHhCccccccCccccceEEEccccCCHHHHHHHHHHh-CCCeecccccccCCcccccCCC-CCCCCCCCc
Confidence 99999999999875443445578899999999999999999999888 7999999999999876654322 222345689
Q ss_pred ccccCCceEEEEc-CCCCccCCCCCceEEEEeCccccccccCCcccccccccCCCeeeccceEEEcCCCcEEEEcccCCe
Q 011116 310 GRLAELMEAKIVD-PATGEALPPGQKGELWLRGPTIMKGYVGDDKATSETVHSEGWLKTGDLCYFDSNGFLFIVDRLKEL 388 (493)
Q Consensus 310 g~p~~~~~~~i~d-~~~~~~~~~g~~Gel~v~~~~~~~gy~~~~~~~~~~~~~~~~~~TgD~~~~~~~g~~~~~GR~~d~ 388 (493)
|.|.+++.+++.+ .+.+++++.|+.|||+++|+.++.||+++++.+.+.|. ++||+|||+++++++|++++.||.+|+
T Consensus 368 G~~~~~~~~~v~~~d~~~~~~~~g~~Gel~v~~~~~~~gy~~~~~~~~~~~~-~~~~~TGD~~~~~~~g~l~i~GR~~~~ 446 (541)
T TIGR03205 368 GLMLPGIELDVVSLDDPTKVLPPGEVGELRIRGPNVTRGYWNRPEESAEAFV-GDRFLTGDIGYMDTDGYFFLVDRKKDM 446 (541)
T ss_pred ceeccCceeEEEecCCCCccCCCCCeeEEEEecCCccccccCChhhhHhhhc-cCCcccCceEEEcCCceEEEEccccCe
Confidence 9999999988764 26678899999999999999999999999998888774 789999999999999999999999999
Q ss_pred EEeCceeeChHHHHHHHhcCCCcceEEEEeeeCCCCCeeEEEEEEeCCCC-CCCHHHHHHHHHhcCCCCCCcceEEEecc
Q 011116 389 IKYKAYQVPPVELEHLLHSNPEIADAAVIPYPDEEAGQIPMAFVVRKPGS-NITEAEIMDFIAKQVAPYKKIRRVAFINS 467 (493)
Q Consensus 389 i~~~G~~i~~~~ie~~l~~~~~v~~~~v~~~~~~~~~~~~~~~v~~~~~~-~~~~~~l~~~l~~~l~~~~~p~~~~~~~~ 467 (493)
||.+|.+|++.+||+.+.+++.|.++++++.+++..++.+++++++.++. ..+.+++.++++++|+++++|..+.++++
T Consensus 447 i~~~G~~i~~~eIE~~l~~~~~v~~~~v~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~~~~l~~~~~P~~i~~~~~ 526 (541)
T TIGR03205 447 IISGGFNVYPQMIEQAIYEHPGVQEVIVIGIPDQYRGEAAKAFVKLRPGAKPFSLDELRAFLAGKLGKHELPVAVEFVDE 526 (541)
T ss_pred EEECCEEECHHHHHHHHHhCCCeeeEEEEecCCcccCceEEEEEEECCCCCcCCHHHHHHHHHhhcccccCCcEEEEecc
Confidence 99999999999999999999999999999999887788889999887653 35778999999999999999999999999
Q ss_pred ccCCCCCccchHHHH
Q 011116 468 IPKSTAGKILRRELV 482 (493)
Q Consensus 468 lP~t~~GK~~r~~l~ 482 (493)
+|+|++||++|+.|+
T Consensus 527 iP~t~~gK~~r~~l~ 541 (541)
T TIGR03205 527 LPRTPVGKLSRHELR 541 (541)
T ss_pred CCCCcccceeHhhcC
Confidence 999999999999874
No 95
>PRK08974 long-chain-fatty-acid--CoA ligase; Validated
Probab=100.00 E-value=4.6e-58 Score=473.89 Aligned_cols=457 Identities=29% Similarity=0.464 Sum_probs=374.8
Q ss_pred hHHHHHHhhCCCCCCCEEEEECCCCCCcHHHHHHHHHHcCCeeccCCCCCCHHHHHHHHhhcCCeEEEEcCCCcccCCC-
Q 011116 18 TLSHALSKRDSLCRKTTSLTSSPLPPSTSPVLYFSLLSLGVVISPANPLSSTSEVSHQIQLSKPSIAFATSHTSYKLPS- 96 (493)
Q Consensus 18 ~lA~~L~~~~gl~~gd~V~l~~~~~~~~~~~~~lA~~~~G~~~v~i~~~~~~~~l~~~l~~~~~~~il~~~~~~~~~~~- 96 (493)
++|.+|+.+.|+++||+|+++++ |+++++++++||+++|++++|++|..+.+.+.++++.++++.++++++....+.+
T Consensus 60 ~la~~L~~~~g~~~g~~V~i~~~-~~~~~~~~~lA~~~~G~~~v~l~~~~~~~~~~~~l~~~~~~~ii~~~~~~~~~~~~ 138 (560)
T PRK08974 60 AFAAYLQNGLGLKKGDRVALMMP-NLLQYPIALFGILRAGMIVVNVNPLYTPRELEHQLNDSGAKAIVIVSNFAHTLEKV 138 (560)
T ss_pred HHHHHHHHhcCCCCCCEEEEECC-CCHHHHHHHHHHHHcCcEEeccCccCCHHHHHHHHHhcCceEEEEeccccHHHHHH
Confidence 34999943589999999999999 9999999999999999999999999999999999999999999998754332221
Q ss_pred ----CCcEEEecC--c------------------------------hhhhhhccCcccccccCCCCCCCCCCeEEEEccC
Q 011116 97 ----NLRTILMDS--P------------------------------EFISLLNQNEDVADFANSNMTVYQSDPAAILYSS 140 (493)
Q Consensus 97 ----~~~~~~~~~--~------------------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~TS 140 (493)
....+.+.. . .+.+...... ...........+++++++|||
T Consensus 139 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~a~i~~TS 215 (560)
T PRK08974 139 VFKTPVKHVILTRMGDQLSTAKGTLVNFVVKYIKRLVPKYHLPDAISFRSALHKGR---RMQYVKPELVPEDLAFLQYTG 215 (560)
T ss_pred hhhcCcceEEEecccccccccccccccchhhhcccccccccCCCcccHHHHhhccC---CCCCCCCCCCCCCeEEEEECC
Confidence 111111100 0 0000000000 001111234578999999999
Q ss_pred CCCCCccceecchHHHHHHHHHhhhhcccCCCCCCCCCCcEEEEecChhHHHHH-HHHHHHHhcCCeEEEe-cCCCHHHH
Q 011116 141 GTTGKVKGVLLSHLNVIAIIAGYYHVTEETDPNEGPPPHPVSFFTLPMFHVFGF-FMLVRAASKGETLVFM-ERFDFEKM 218 (493)
Q Consensus 141 GTTG~pK~v~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pl~~~~g~-~~~~~~l~~G~~~~~~-~~~~~~~~ 218 (493)
||||.||+|.++|.++..++......+.. ......+.++..+|++|.+++ ...+.++..|++.++. +..++..+
T Consensus 216 GtTG~PK~v~~t~~~l~~~~~~~~~~~~~----~~~~~~~~~~~~~p~~~~~~~~~~~~~~l~~g~~~~~~~~~~~~~~~ 291 (560)
T PRK08974 216 GTTGVAKGAMLTHRNMLANLEQAKAAYGP----LLHPGKELVVTALPLYHIFALTVNCLLFIELGGQNLLITNPRDIPGF 291 (560)
T ss_pred CCCCCCcEEEEchHHHHHHHHHHHHhhcc----ccCCCccEEEEeCcHHHHHHHHHHHHHHhhcCCeEEEecCccCHHHH
Confidence 99999999999999998766544333211 012346778899999999887 4566778889887766 45678999
Q ss_pred HHHHHhcCeeecccChHHHHHHHhcccCCCCCCCCeeEEEecCCCCCHHHHHHHHHhCCCCceeccccccccCCcccccc
Q 011116 219 LKAVENYRVTYMPVSPPLIVAFINSKLTDKYDLSSLQLLGCGGAPLGKEVTLKFKEKFPNVEIRQGYGLTETGGAGSRVI 298 (493)
Q Consensus 219 ~~~l~~~~~t~l~~~P~~~~~l~~~~~~~~~~l~~lr~v~~~Ge~~~~~~~~~~~~~~~~~~v~~~yG~tE~g~~~~~~~ 298 (493)
++.++++++|++.++|+++..+..........++++|.+++||+++++.+.++|++.+ ++.+++.||+||++..+..+.
T Consensus 292 ~~~i~~~~~t~~~~~p~~~~~l~~~~~~~~~~~~~lr~~~~gg~~~~~~~~~~~~~~~-g~~~~~~YG~tE~~~~~~~~~ 370 (560)
T PRK08974 292 VKELKKYPFTAITGVNTLFNALLNNEEFQELDFSSLKLSVGGGMAVQQAVAERWVKLT-GQYLLEGYGLTECSPLVSVNP 370 (560)
T ss_pred HHHHHhcCcceEcCcHHHHHHHHhCcCcccCCccceeEEEecCccCCHHHHHHHHHHh-CCcEEeeecccccCceeeccC
Confidence 9999999999999999999999887655556678999999999999999999999988 899999999999987665532
Q ss_pred CCCCCCCCCccccccCCceEEEEcCCCCccCCCCCceEEEEeCccccccccCCcccccccccCCCeeeccceEEEcCCCc
Q 011116 299 GPDEAERHGSVGRLAELMEAKIVDPATGEALPPGQKGELWLRGPTIMKGYVGDDKATSETVHSEGWLKTGDLCYFDSNGF 378 (493)
Q Consensus 299 ~~~~~~~~~~~g~p~~~~~~~i~d~~~~~~~~~g~~Gel~v~~~~~~~gy~~~~~~~~~~~~~~~~~~TgD~~~~~~~g~ 378 (493)
. .......++|.|.+++.++++| ++++.++.|+.|||+++|+.+..||+++++.+...+ .+|||+|||+++++++|.
T Consensus 371 ~-~~~~~~~~~G~~~~~~~~~i~~-~~~~~~~~g~~Gel~v~g~~~~~gy~~~~~~~~~~~-~~g~~~TGDl~~~~~~g~ 447 (560)
T PRK08974 371 Y-DLDYYSGSIGLPVPSTEIKLVD-DDGNEVPPGEPGELWVKGPQVMLGYWQRPEATDEVI-KDGWLATGDIAVMDEEGF 447 (560)
T ss_pred C-CCcccCCccccCcCCCEEEEEC-CCCCCCCCCCceEEEEecCCcchhhcCChhhhhhhh-hcCCcccCCEEEEcCCce
Confidence 2 1223456899999999999999 568899999999999999999999999999888877 589999999999999999
Q ss_pred EEEEcccCCeEEeCceeeChHHHHHHHhcCCCcceEEEEeeeCCCCCeeEEEEEEeCCCCCCCHHHHHHHHHhcCCCCCC
Q 011116 379 LFIVDRLKELIKYKAYQVPPVELEHLLHSNPEIADAAVIPYPDEEAGQIPMAFVVRKPGSNITEAEIMDFIAKQVAPYKK 458 (493)
Q Consensus 379 ~~~~GR~~d~i~~~G~~i~~~~ie~~l~~~~~v~~~~v~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~l~~~l~~~~~ 458 (493)
+++.||.+|+|+++|.++++.+||++|.++++|.++++++.+++..++.++++++..+ ...+.+++++++.+++++++.
T Consensus 448 l~i~GR~~d~i~~~G~~i~~~~IE~~l~~~~~v~~~~v~~~~~~~~g~~~~~~v~~~~-~~~~~~~l~~~l~~~l~~~~~ 526 (560)
T PRK08974 448 LRIVDRKKDMILVSGFNVYPNEIEDVVMLHPKVLEVAAVGVPSEVSGEAVKIFVVKKD-PSLTEEELITHCRRHLTGYKV 526 (560)
T ss_pred EEEEecccceEEeCCEEECHHHHHHHHHhCCCeeEEEEEeeecCCcceEEEEEEECCC-CCCCHHHHHHHHHhhcccccC
Confidence 9999999999999999999999999999999999999999998888887777776543 345678899999999999999
Q ss_pred cceEEEeccccCCCCCccchHHHHHHHhh
Q 011116 459 IRRVAFINSIPKSTAGKILRRELVTHAIS 487 (493)
Q Consensus 459 p~~~~~~~~lP~t~~GK~~r~~l~~~~~~ 487 (493)
|..+.+++++|+|++||++|+.|++++..
T Consensus 527 P~~~~~~~~lP~t~~GK~~r~~l~~~~~~ 555 (560)
T PRK08974 527 PKLVEFRDELPKSNVGKILRRELRDEARA 555 (560)
T ss_pred CcEEEEhhhCCCCCCCcEeHHHHHHHHHh
Confidence 99999999999999999999999998765
No 96
>TIGR01923 menE O-succinylbenzoate-CoA ligase. This model represents an enzyme, O-succinylbenzoate-CoA ligase, which is involved in the fourth step of the menaquinone biosynthesis pathway. O-succinylbenzoate-CoA ligase, together with menB - naphtoate synthase, take 2-succinylbenzoate and convert it into 1,4-di-hydroxy-2- naphtoate.
Probab=100.00 E-value=1.6e-58 Score=463.41 Aligned_cols=430 Identities=25% Similarity=0.389 Sum_probs=360.0
Q ss_pred ccchhhhHHHHHHhhCCCCCCCEEEEECCCCCCcHHHHHHHHHHcCCeeccCCCCCCHHHHHHHHhhcCCeEEEEcCCCc
Q 011116 12 NSSARFTLSHALSKRDSLCRKTTSLTSSPLPPSTSPVLYFSLLSLGVVISPANPLSSTSEVSHQIQLSKPSIAFATSHTS 91 (493)
Q Consensus 12 ~~~~~~~lA~~L~~~~gl~~gd~V~l~~~~~~~~~~~~~lA~~~~G~~~v~i~~~~~~~~l~~~l~~~~~~~il~~~~~~ 91 (493)
+.++++ |+.| .+.|+++||+|+++++ |+++++++++||+++|++++|+++.++.+.+..++++++++.+++++...
T Consensus 7 ~~~~~~--a~~l-~~~g~~~gd~v~i~~~-~~~~~~~~~la~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~ 82 (436)
T TIGR01923 7 CEAAHL--AKAL-KAQGIRSGSRVALVGQ-NSIEMVLLLHACLLLGAEIAMLNTRLTENERTNQLEDLDVQLLLTDSLLE 82 (436)
T ss_pred HHHHHH--HHHH-HHhCCCCCCEEEEEcC-CCHHHHHHHHHHHhcCcEEEecCcCCCHHHHHHHHHhcCCCEEEEcCccc
Confidence 345555 9999 7889999999999999 99999999999999999999999999999999999999999999987642
Q ss_pred ccCCCCCcEEEecCchhhhhhccCcccccccCCCCCCCCCCeEEEEccCCCCCCccceecchHHHHHHHHHhhhhcccCC
Q 011116 92 YKLPSNLRTILMDSPEFISLLNQNEDVADFANSNMTVYQSDPAAILYSSGTTGKVKGVLLSHLNVIAIIAGYYHVTEETD 171 (493)
Q Consensus 92 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~TSGTTG~pK~v~~t~~~~~~~~~~~~~~~~~~~ 171 (493)
... .. ...+..+..... ...........+++++++|||||||.||++.++|.++...+......+
T Consensus 83 ~~~---~~-----~~~~~~~~~~~~---~~~~~~~~~~~~~~~~i~~TSGtTG~PK~v~~s~~~~~~~~~~~~~~~---- 147 (436)
T TIGR01923 83 EKD---FQ-----ADSLDRIEAAGR---YETSLSASFNMDQIATLMFTSGTTGKPKAVPHTFRNHYASAVGSKENL---- 147 (436)
T ss_pred ccc---ee-----ecchHhhhhccc---ccccccccCCcCceEEEEeCCCCCCCCcEEEEehHHHHHHHHHHHhhc----
Confidence 211 11 111111111111 111122345678899999999999999999999999988888776665
Q ss_pred CCCCCCCCcEEEEecChhHHHHHHHHHHHHhcCCeEEEecCCCHHHHHHHHHhcCeeecccChHHHHHHHhcccCCCCCC
Q 011116 172 PNEGPPPHPVSFFTLPMFHVFGFFMLVRAASKGETLVFMERFDFEKMLKAVENYRVTYMPVSPPLIVAFINSKLTDKYDL 251 (493)
Q Consensus 172 ~~~~~~~~~~~~~~~pl~~~~g~~~~~~~l~~G~~~~~~~~~~~~~~~~~l~~~~~t~l~~~P~~~~~l~~~~~~~~~~l 251 (493)
+..++|++++.+|++|..++..++.++..|+++++.+.. ..+++.++++++|++.++|+++..+++.... .
T Consensus 148 ---~~~~~d~~~~~~~~~~~~~~~~~~~~l~~g~~~~~~~~~--~~~~~~l~~~~~t~~~~~P~~l~~l~~~~~~----~ 218 (436)
T TIGR01923 148 ---GFTEDDNWLLSLPLYHISGLSILFRWLIEGATLRIVDKF--NQLLEMIANERVTHISLVPTQLNRLLDEGGH----N 218 (436)
T ss_pred ---CCCCCceEEEccCcHhHHHHHHHHHHHhcCceEEecchH--HHHHHHHHHhCCeEEEeHHHHHHHHHhCcCC----C
Confidence 348899999999999999998889999999999998764 4999999999999999999999999886532 2
Q ss_pred CCeeEEEecCCCCCHHHHHHHHHhCCCCceeccccccccCCccccccCCCCCCCCCccccccCCceEEEEcCCCCccCCC
Q 011116 252 SSLQLLGCGGAPLGKEVTLKFKEKFPNVEIRQGYGLTETGGAGSRVIGPDEAERHGSVGRLAELMEAKIVDPATGEALPP 331 (493)
Q Consensus 252 ~~lr~v~~~Ge~~~~~~~~~~~~~~~~~~v~~~yG~tE~g~~~~~~~~~~~~~~~~~~g~p~~~~~~~i~d~~~~~~~~~ 331 (493)
+++|.++++|+++++++.+++++. ++.+++.||+||++.......... .....++|.|.+++++++.+.+.
T Consensus 219 ~~l~~~~~~G~~~~~~~~~~~~~~--~~~~~~~YG~tE~~~~~~~~~~~~-~~~~~~~G~~~~~~~~~i~~~~~------ 289 (436)
T TIGR01923 219 ENLRKILLGGSAIPAPLIEEAQQY--GLPIYLSYGMTETCSQVTTATPEM-LHARPDVGRPLAGREIKIKVDNK------ 289 (436)
T ss_pred CceEEEEECCCCCCHHHHHHHHHh--CCceeeEecCCccchhccCcCccc-cccccCCCccCCCcEEEEEeCCC------
Confidence 679999999999999999988774 899999999999987655432222 12222489999999999844222
Q ss_pred CCceEEEEeCccccccccCCcccccccccCCCeeeccceEEEcCCCcEEEEcccCCeEEeCceeeChHHHHHHHhcCCCc
Q 011116 332 GQKGELWLRGPTIMKGYVGDDKATSETVHSEGWLKTGDLCYFDSNGFLFIVDRLKELIKYKAYQVPPVELEHLLHSNPEI 411 (493)
Q Consensus 332 g~~Gel~v~~~~~~~gy~~~~~~~~~~~~~~~~~~TgD~~~~~~~g~~~~~GR~~d~i~~~G~~i~~~~ie~~l~~~~~v 411 (493)
++.|||+++|+.++.||+++++.+...+ .++||+|||++++++||.+++.||.+|+||++|+++++.+||++|.+++.|
T Consensus 290 ~~~Gel~v~~~~~~~gy~~~~~~~~~~~-~~~~~~TGD~~~~~~dg~~~~~GR~~d~i~~~G~~v~~~~iE~~l~~~~~v 368 (436)
T TIGR01923 290 EGHGEIMVKGANLMKGYLYQGELTPAFE-QQGWFNTGDIGELDGEGFLYVLGRRDDLIISGGENIYPEEIETVLYQHPGI 368 (436)
T ss_pred CCceEEEEECCccchhhCCChhhhhhhh-cCCCeeccceEEEcCCCCEEEeccccCeEEeCCEeeCHHHHHHHHHhCCCe
Confidence 2679999999999999999877776554 579999999999999999999999999999999999999999999999999
Q ss_pred ceEEEEeeeCCCCCeeEEEEEEeCCCCCCCHHHHHHHHHhcCCCCCCcceEEEeccccCCCCCccchHHH
Q 011116 412 ADAAVIPYPDEEAGQIPMAFVVRKPGSNITEAEIMDFIAKQVAPYKKIRRVAFINSIPKSTAGKILRREL 481 (493)
Q Consensus 412 ~~~~v~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~l~~~l~~~~~p~~~~~~~~lP~t~~GK~~r~~l 481 (493)
.++++++.+++..++.+.+++++.++ .+.+++.+++++.++.+++|..++++++||+|++||++|++|
T Consensus 369 ~~~~v~~~~~~~~~~~~~~~v~~~~~--~~~~~l~~~l~~~l~~~~~p~~i~~~~~iP~t~~GK~~r~~L 436 (436)
T TIGR01923 369 QEAVVVPKPDAEWGQVPVAYIVSESD--ISQAKLIAYLTEKLAKYKVPIAFEKLDELPYNASGKILRNQL 436 (436)
T ss_pred eEEEEeCCcchhcCCeeEEEEEECCC--CCHHHHHHHHHHhhhCCCCCeEEEEecCCCCCCCCceecccC
Confidence 99999998877677788888887653 677899999999999999999999999999999999999865
No 97
>PRK13391 acyl-CoA synthetase; Provisional
Probab=100.00 E-value=5.6e-58 Score=468.22 Aligned_cols=451 Identities=25% Similarity=0.341 Sum_probs=370.9
Q ss_pred hhHHHHHHhhCCCCCCCEEEEECCCCCCcHHHHHHHHHHcCCeeccCCCCCCHHHHHHHHhhcCCeEEEEcCCCcccCC-
Q 011116 17 FTLSHALSKRDSLCRKTTSLTSSPLPPSTSPVLYFSLLSLGVVISPANPLSSTSEVSHQIQLSKPSIAFATSHTSYKLP- 95 (493)
Q Consensus 17 ~~lA~~L~~~~gl~~gd~V~l~~~~~~~~~~~~~lA~~~~G~~~v~i~~~~~~~~l~~~l~~~~~~~il~~~~~~~~~~- 95 (493)
.++|++| .+.|+++|++|+++++ ++++++++++||+++|++++++++.++.+.+.++++.++++.++++......+.
T Consensus 35 ~~la~~L-~~~g~~~~~~V~v~~~-~~~~~~~~~~a~~~~G~~~~~l~~~~~~~~l~~~l~~~~~~~li~~~~~~~~~~~ 112 (511)
T PRK13391 35 NRLAHLF-RSLGLKRGDHVAIFME-NNLRYLEVCWAAERSGLYYTCVNSHLTPAEAAYIVDDSGARALITSAAKLDVARA 112 (511)
T ss_pred HHHHHHH-HHcCCCCCCEEEEECC-CCHHHHHHHHHHHHhccEEeccccccCHHHHHHHHhccCCcEEEEchhhHHHHHH
Confidence 3469999 7789999999999999 999999999999999999999999999999999999999999999876543221
Q ss_pred ------CCCcEEEecCc----h---hhhhhccCcccccccCCCCCCCCCCeEEEEccCCCCCCccceec--chHHHHHHH
Q 011116 96 ------SNLRTILMDSP----E---FISLLNQNEDVADFANSNMTVYQSDPAAILYSSGTTGKVKGVLL--SHLNVIAII 160 (493)
Q Consensus 96 ------~~~~~~~~~~~----~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~TSGTTG~pK~v~~--t~~~~~~~~ 160 (493)
.....+.+... . +.+.... .......+.++.++++|||||||.||+|.+ +|.+.....
T Consensus 113 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~a~il~TSGtTG~PKgv~~~~~~~~~~~~~ 185 (511)
T PRK13391 113 LLKQCPGVRHRLVLDGDGELEGFVGYAEAVAG-------LPATPIADESLGTDMLYSSGTTGRPKGIKRPLPEQPPDTPL 185 (511)
T ss_pred HHhcCCCceEEEEecCCCCCcccccHHHHhcC-------CCCCCCCCcccccEEEECCCCCCCCCEEEEccccchhhhhh
Confidence 11112222211 1 1111111 011111234467899999999999999995 455543222
Q ss_pred ---HHhhhhcccCCCCCCCCCCcEEEEecChhHHHHHHHHHHHHhcCCeEEEecCCCHHHHHHHHHhcCeeecccChHHH
Q 011116 161 ---AGYYHVTEETDPNEGPPPHPVSFFTLPMFHVFGFFMLVRAASKGETLVFMERFDFEKMLKAVENYRVTYMPVSPPLI 237 (493)
Q Consensus 161 ---~~~~~~~~~~~~~~~~~~~~~~~~~~pl~~~~g~~~~~~~l~~G~~~~~~~~~~~~~~~~~l~~~~~t~l~~~P~~~ 237 (493)
......+ ++...++++...|++|..++...+.++..|+++++.+.++++.+++.++++++|++.++|+++
T Consensus 186 ~~~~~~~~~~-------~~~~~~~~l~~~p~~h~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~i~~~~~t~~~~~p~~~ 258 (511)
T PRK13391 186 PLTAFLQRLW-------GFRSDMVYLSPAPLYHSAPQRAVMLVIRLGGTVIVMEHFDAEQYLALIEEYGVTHTQLVPTMF 258 (511)
T ss_pred HHHHHHHHhc-------CCCCCCeEEEcCCHHHHHHHHHHHHHHHcCceEEECCCCCHHHHHHHHHHhCCeEEEehHHHH
Confidence 2222222 346788999999999999987778899999999999888999999999999999999999999
Q ss_pred HHHHhcccC--CCCCCCCeeEEEecCCCCCHHHHHHHHHhCCCCceeccccccccCCccccccCCCCCCCCCccccccCC
Q 011116 238 VAFINSKLT--DKYDLSSLQLLGCGGAPLGKEVTLKFKEKFPNVEIRQGYGLTETGGAGSRVIGPDEAERHGSVGRLAEL 315 (493)
Q Consensus 238 ~~l~~~~~~--~~~~l~~lr~v~~~Ge~~~~~~~~~~~~~~~~~~v~~~yG~tE~g~~~~~~~~~~~~~~~~~~g~p~~~ 315 (493)
..+.+.... ...+++++|.+++||+++++++.+++++.| +..+++.||+||++.+... .........+++|+|.++
T Consensus 259 ~~l~~~~~~~~~~~~~~~l~~~~~gg~~~~~~~~~~~~~~~-g~~v~~~YG~tE~~~~~~~-~~~~~~~~~~~vG~~~~g 336 (511)
T PRK13391 259 SRMLKLPEEVRDKYDLSSLEVAIHAAAPCPPQVKEQMIDWW-GPIIHEYYAATEGLGFTAC-DSEEWLAHPGTVGRAMFG 336 (511)
T ss_pred HHHHhCchhhcccCCccceeEEEEccCCCCHHHHHHHHHHc-CCceeeeeccccccceEEe-cCccccccCCCcCCcccc
Confidence 988765432 234578999999999999999999999988 7889999999999876543 122222355789999999
Q ss_pred ceEEEEcCCCCccCCCCCceEEEEeCccccccccCCcccccccccCC-CeeeccceEEEcCCCcEEEEcccCCeEEeCce
Q 011116 316 MEAKIVDPATGEALPPGQKGELWLRGPTIMKGYVGDDKATSETVHSE-GWLKTGDLCYFDSNGFLFIVDRLKELIKYKAY 394 (493)
Q Consensus 316 ~~~~i~d~~~~~~~~~g~~Gel~v~~~~~~~gy~~~~~~~~~~~~~~-~~~~TgD~~~~~~~g~~~~~GR~~d~i~~~G~ 394 (493)
.++++| +++.+++.|+.|||+++|+ +..||+++++.+...+..+ +||+|||+++++++|.+++.||.+|++|.+|.
T Consensus 337 -~~~i~d-~~~~~~~~g~~Gel~~~g~-~~~gy~~~~~~~~~~~~~~~~w~~TGD~g~~~~~g~l~~~gR~~~~i~~~G~ 413 (511)
T PRK13391 337 -DLHILD-DDGAELPPGEPGTIWFEGG-RPFEYLNDPAKTAEARHPDGTWSTVGDIGYVDEDGYLYLTDRAAFMIISGGV 413 (511)
T ss_pred -eEEEEC-CCCCCCCCCCceEEEEecC-cceEEcCChhHhHHhhccCCCEEecCCEEEECCCccEEEeccCCCEEEeCCE
Confidence 689999 7788999999999999999 8899999999888887655 89999999999999999999999999999999
Q ss_pred eeChHHHHHHHhcCCCcceEEEEeeeCCCCCeeEEEEEEeCCCCC---CCHHHHHHHHHhcCCCCCCcceEEEeccccCC
Q 011116 395 QVPPVELEHLLHSNPEIADAAVIPYPDEEAGQIPMAFVVRKPGSN---ITEAEIMDFIAKQVAPYKKIRRVAFINSIPKS 471 (493)
Q Consensus 395 ~i~~~~ie~~l~~~~~v~~~~v~~~~~~~~~~~~~~~v~~~~~~~---~~~~~l~~~l~~~l~~~~~p~~~~~~~~lP~t 471 (493)
++++.+||+++.++|.|.++++++.+++..++.+++++++.++.. ...+++++++++++++++.|..+.+++++|+|
T Consensus 414 ~v~~~eie~~l~~~~~v~~~~v~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~~~~P~~i~~~~~~P~t 493 (511)
T PRK13391 414 NIYPQEAENLLITHPKVADAAVFGVPNEDLGEEVKAVVQPVDGVDPGPALAAELIAFCRQRLSRQKCPRSIDFEDELPRL 493 (511)
T ss_pred EECHHHHHHHHHhCCCcceEEEEecCCcccCceeEEEEEECCCCCcccchHHHHHHHHHhhcccCcCCcEEEEeecCCCC
Confidence 999999999999999999999999988888888888888765432 23478999999999999999999999999999
Q ss_pred CCCccchHHHHHHHhhC
Q 011116 472 TAGKILRRELVTHAISG 488 (493)
Q Consensus 472 ~~GK~~r~~l~~~~~~~ 488 (493)
++||++|+.|++.+..+
T Consensus 494 ~~gKv~r~~l~~~~~~~ 510 (511)
T PRK13391 494 PTGKLYKRLLRDRYWGN 510 (511)
T ss_pred CccceeHHHHHHHhhcc
Confidence 99999999999988765
No 98
>PRK08180 feruloyl-CoA synthase; Reviewed
Probab=100.00 E-value=3.4e-59 Score=485.98 Aligned_cols=448 Identities=22% Similarity=0.290 Sum_probs=352.6
Q ss_pred hHHHHHHhhCCCCCCCEEEEECCCCCCcHHHHHHHHHHcCCeeccCCCCCC-----HHHHHHHHhhcCCeEEEEcCCC--
Q 011116 18 TLSHALSKRDSLCRKTTSLTSSPLPPSTSPVLYFSLLSLGVVISPANPLSS-----TSEVSHQIQLSKPSIAFATSHT-- 90 (493)
Q Consensus 18 ~lA~~L~~~~gl~~gd~V~l~~~~~~~~~~~~~lA~~~~G~~~v~i~~~~~-----~~~l~~~l~~~~~~~il~~~~~-- 90 (493)
++|++| .+.|+++||+|+++++ |+++++++++||+++|++++|+++.++ .+++.++++.++++++++++..
T Consensus 81 ~~A~~L-~~~Gv~~gd~Vai~~~-n~~e~~~~~lA~~~~Gav~vpl~~~~~~~~~~~~~l~~~l~~~~~~~li~~~~~~~ 158 (614)
T PRK08180 81 AIAQAL-LDRGLSAERPLMILSG-NSIEHALLALAAMYAGVPYAPVSPAYSLVSQDFGKLRHVLELLTPGLVFADDGAAF 158 (614)
T ss_pred HHHHHH-HHcCCCCCCEEEEecC-CCHHHHHHHHHHHHcCCeEeeeccccccccCCHHHHHHHHhcCCCcEEEEcCHHHH
Confidence 359999 7789999999999999 999999999999999999999999998 7999999999999999997531
Q ss_pred cccCC----CCCcEEEecC-------chhhhhhccCcccccccCCCCCCCCCCeEEEEccCCCCCCccceecchHHHHHH
Q 011116 91 SYKLP----SNLRTILMDS-------PEFISLLNQNEDVADFANSNMTVYQSDPAAILYSSGTTGKVKGVLLSHLNVIAI 159 (493)
Q Consensus 91 ~~~~~----~~~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~TSGTTG~pK~v~~t~~~~~~~ 159 (493)
...+. .....+..+. ..|..+....... ..........++++++|+|||||||.||+|.++|+++...
T Consensus 159 ~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~d~a~ilyTSGTTG~PKgV~~sh~~l~~~ 237 (614)
T PRK08180 159 ARALAAVVPADVEVVAVRGAVPGRAATPFAALLATPPTA-AVDAAHAAVGPDTIAKFLFTSGSTGLPKAVINTHRMLCAN 237 (614)
T ss_pred HHHHhhhccCCceEEEecCCCCCcccccHHHHhcccccc-chhhhccCCCcCceEEEEECCCCCCCCCEEEeehHHHHHH
Confidence 11111 1222333221 2344443321100 0011112345789999999999999999999999999888
Q ss_pred HHHhhhhcccCCCCCCCCCCcEEEEecChhHHHHH-HHHHHHHhcCCeEEEecC-CC---HHHHHHHHHhcCeeecccCh
Q 011116 160 IAGYYHVTEETDPNEGPPPHPVSFFTLPMFHVFGF-FMLVRAASKGETLVFMER-FD---FEKMLKAVENYRVTYMPVSP 234 (493)
Q Consensus 160 ~~~~~~~~~~~~~~~~~~~~~~~~~~~pl~~~~g~-~~~~~~l~~G~~~~~~~~-~~---~~~~~~~l~~~~~t~l~~~P 234 (493)
.......+.. .....+++++.+|++|.+++ ..++.++..|+++++.+. ++ ...+++.++++++|+++++|
T Consensus 238 ~~~~~~~~~~-----~~~~~~~~l~~lPl~h~~g~~~~~~~~l~~G~~v~~~~~~~~~~~~~~~l~~i~~~~~t~~~~vP 312 (614)
T PRK08180 238 QQMLAQTFPF-----LAEEPPVLVDWLPWNHTFGGNHNLGIVLYNGGTLYIDDGKPTPGGFDETLRNLREISPTVYFNVP 312 (614)
T ss_pred HHHHHhhccc-----cCCCCcEEEEecchHHHhhHHHHHHHHHhcCCEEEEeCCCccchhHHHHHHHHHHhCCcEEechH
Confidence 7766555432 01256899999999999997 567889999999998753 33 35788899999999999999
Q ss_pred HHHHHHHhcccCC----CCCCCCeeEEEecCCCCCHHHHHHHHHh----CC-CCceeccccccccCCccccccCCCCCCC
Q 011116 235 PLIVAFINSKLTD----KYDLSSLQLLGCGGAPLGKEVTLKFKEK----FP-NVEIRQGYGLTETGGAGSRVIGPDEAER 305 (493)
Q Consensus 235 ~~~~~l~~~~~~~----~~~l~~lr~v~~~Ge~~~~~~~~~~~~~----~~-~~~v~~~yG~tE~g~~~~~~~~~~~~~~ 305 (493)
.++..|++..... ...++++|.+++||+++++++.+++++. ++ ++.+++.||+||++.+++.... ....
T Consensus 313 ~~~~~l~~~~~~~~~~~~~~~~~lr~v~~gGa~l~~~~~~~~~~~~~~~~g~~~~l~~~YG~TE~~~~~~~~~~--~~~~ 390 (614)
T PRK08180 313 KGWEMLVPALERDAALRRRFFSRLKLLFYAGAALSQDVWDRLDRVAEATCGERIRMMTGLGMTETAPSATFTTG--PLSR 390 (614)
T ss_pred HHHHHHHHHHHhchhhhhhhccceeEEEEccCCCCHHHHHHHHHHHHhhcCCCceeeeeecccccCCceEeccc--ccCC
Confidence 9999988754321 2346899999999999999999999875 31 3789999999999876554222 2345
Q ss_pred CCccccccCCceEEEEcCCCCccCCCCCceEEEEeCccccccccCCcccccccccCCCeeeccceEEE----cCCCcEEE
Q 011116 306 HGSVGRLAELMEAKIVDPATGEALPPGQKGELWLRGPTIMKGYVGDDKATSETVHSEGWLKTGDLCYF----DSNGFLFI 381 (493)
Q Consensus 306 ~~~~g~p~~~~~~~i~d~~~~~~~~~g~~Gel~v~~~~~~~gy~~~~~~~~~~~~~~~~~~TgD~~~~----~~~g~~~~ 381 (493)
.+++|+|.++++++++|+ +..|||+++|+.++.||+++++.+.+.|+.+|||+|||+|++ +++|++++
T Consensus 391 ~~svG~p~pg~~v~i~d~--------~~~GEi~vrg~~v~~GY~~~p~~t~~~~~~dgw~~TGDlg~~~~~~d~~g~l~i 462 (614)
T PRK08180 391 AGNIGLPAPGCEVKLVPV--------GGKLEVRVKGPNVTPGYWRAPELTAEAFDEEGYYRSGDAVRFVDPADPERGLMF 462 (614)
T ss_pred CCcccCccCCcEEEEecC--------CCCcEEEEecCccchhhcCChhHhHhhcccCCceeccceEEecCCcCCCCceEE
Confidence 679999999999999983 335999999999999999999999998877899999999999 46899999
Q ss_pred EcccCCeEEe-CceeeC--hHHHHHHHhcCCCcceEEEEeeeCCCCCeeEEEEEEeCCCC---------------CCCHH
Q 011116 382 VDRLKELIKY-KAYQVP--PVELEHLLHSNPEIADAAVIPYPDEEAGQIPMAFVVRKPGS---------------NITEA 443 (493)
Q Consensus 382 ~GR~~d~i~~-~G~~i~--~~~ie~~l~~~~~v~~~~v~~~~~~~~~~~~~~~v~~~~~~---------------~~~~~ 443 (493)
.||.+|+|++ +|++|+ +.|+|.++.++|.|.+++|++.+++ .+.++|++.++. ..+.+
T Consensus 463 ~GR~~d~i~~~~G~~i~~~p~Eie~~l~~~p~V~~a~V~g~~~~----~~~a~V~~~~~~~~~~~~~~~~~~~~~~~~~~ 538 (614)
T PRK08180 463 DGRIAEDFKLSSGTWVSVGPLRARAVSAGAPLVQDVVITGHDRD----EIGLLVFPNLDACRRLAGLLADASLAEVLAHP 538 (614)
T ss_pred ecchhhhEEcCCCcEecchhhhHHHHhhcCchhheEEEEcCCCC----ceEEEEEcCHHHHHHHHhhcccCCHHHHhcCH
Confidence 9999998986 798776 7788899999999999999998664 466888876541 12446
Q ss_pred HHHHHHHhcCCCCC--------CcceEEEeccccCC------CCCccchHHHHHHHhh
Q 011116 444 EIMDFIAKQVAPYK--------KIRRVAFINSIPKS------TAGKILRRELVTHAIS 487 (493)
Q Consensus 444 ~l~~~l~~~l~~~~--------~p~~~~~~~~lP~t------~~GK~~r~~l~~~~~~ 487 (493)
+++++++..+..++ +|+++.+++++|++ ++||+.|+.+.+.+.+
T Consensus 539 ~l~~~~~~~l~~~~~~~~~~~~~p~~~~~~~~~p~~~~gk~t~~~~~~R~~~~~~y~~ 596 (614)
T PRK08180 539 AVRAAFRERLARLNAQATGSSTRVARALLLDEPPSLDAGEITDKGYINQRAVLARRAA 596 (614)
T ss_pred HHHHHHHHHHHHHHhhccccHhheeEEEEecCCCCCccCccCccccccHHHHHHHhHH
Confidence 68888887777666 89999999999987 4567888888777654
No 99
>PRK05691 peptide synthase; Validated
Probab=100.00 E-value=6.5e-59 Score=563.04 Aligned_cols=448 Identities=23% Similarity=0.346 Sum_probs=385.5
Q ss_pred chhhhHHHHHHhhCCCCCCCEEEEECCCCCCcHHHHHHHHHHcCCeeccCCCCCCHHHHHHHHhhcCCeEEEEcCCCccc
Q 011116 14 SARFTLSHALSKRDSLCRKTTSLTSSPLPPSTSPVLYFSLLSLGVVISPANPLSSTSEVSHQIQLSKPSIAFATSHTSYK 93 (493)
Q Consensus 14 ~~~~~lA~~L~~~~gl~~gd~V~l~~~~~~~~~~~~~lA~~~~G~~~v~i~~~~~~~~l~~~l~~~~~~~il~~~~~~~~ 93 (493)
++++ |++| .+.|+++|++|+++++ ++++++++++||+++|++++|++|.++.+++.++++.+++++++++.+....
T Consensus 1166 ~~~l--A~~L-~~~gv~~g~~V~i~~~-~s~~~iv~~lailkaG~~~vpld~~~p~~rl~~il~~~~~~~vi~~~~~~~~ 1241 (4334)
T PRK05691 1166 ANRL--AHYL-RDKGVGPDVCVAIAAE-RSPQLLVGLLAILKAGGAYVPLDPDYPAERLAYMLADSGVELLLTQSHLLER 1241 (4334)
T ss_pred HHHH--HHHH-HHcCCCCCCEEEEEeC-CCHHHHHHHHHHHHhCCEEEecCcCChHHHHHHHHHhcCCCEEEecchhhhh
Confidence 4554 9999 7789999999999999 9999999999999999999999999999999999999999999999876655
Q ss_pred CCCC--CcEEEecCchhhhhhccCcccccccCCCCCCCCCCeEEEEccCCCCCCccceecchHHHHHHHHHhhhhcccCC
Q 011116 94 LPSN--LRTILMDSPEFISLLNQNEDVADFANSNMTVYQSDPAAILYSSGTTGKVKGVLLSHLNVIAIIAGYYHVTEETD 171 (493)
Q Consensus 94 ~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~TSGTTG~pK~v~~t~~~~~~~~~~~~~~~~~~~ 171 (493)
+... ...+.++....... ..........++++++++|||||||.||||.++|+++...+.+....+.
T Consensus 1242 ~~~~~~~~~~~~~~~~~~~~--------~~~~~~~~~~~~~~a~ii~TSGSTG~PKgV~~~h~~l~~~~~~~~~~~~--- 1310 (4334)
T PRK05691 1242 LPQAEGVSAIALDSLHLDSW--------PSQAPGLHLHGDNLAYVIYTSGSTGQPKGVGNTHAALAERLQWMQATYA--- 1310 (4334)
T ss_pred cccccCceEEeecccccccc--------CCCCCCCCCCCCCeEEEEEcCCCCCCCceeEeecHHHHHHHHHHHHhcC---
Confidence 5431 22222222111100 0011222456789999999999999999999999999988887776663
Q ss_pred CCCCCCCCcEEEEecChhHHHHHHHHHHHHhcCCeEEEec---CCCHHHHHHHHHhcCeeecccChHHHHHHHhcccCCC
Q 011116 172 PNEGPPPHPVSFFTLPMFHVFGFFMLVRAASKGETLVFME---RFDFEKMLKAVENYRVTYMPVSPPLIVAFINSKLTDK 248 (493)
Q Consensus 172 ~~~~~~~~~~~~~~~pl~~~~g~~~~~~~l~~G~~~~~~~---~~~~~~~~~~l~~~~~t~l~~~P~~~~~l~~~~~~~~ 248 (493)
+.++++++...|++|..+.+.++.++..|+++++.+ ..++..+++.++++++|++.++|+++..+..... .
T Consensus 1311 ----~~~~d~~l~~~~~~fd~s~~~~~~~L~~G~~l~i~~~~~~~~~~~l~~~i~~~~vt~~~~~Ps~l~~l~~~~~--~ 1384 (4334)
T PRK05691 1311 ----LDDSDVLMQKAPISFDVSVWECFWPLITGCRLVLAGPGEHRDPQRIAELVQQYGVTTLHFVPPLLQLFIDEPL--A 1384 (4334)
T ss_pred ----CCCCCEEEEeCCccHHHHHHHHHHHHhCCCEEEEcCccccCCHHHHHHHHHHcCCeEEECcHHHHHHHHhCcc--c
Confidence 488999999999999999999999999999999984 3688999999999999999999999999876532 2
Q ss_pred CCCCCeeEEEecCCCCCHHHHHHHHHhCCCCceeccccccccCCccccccCCCCCCCCCccccccCCceEEEEcCCCCcc
Q 011116 249 YDLSSLQLLGCGGAPLGKEVTLKFKEKFPNVEIRQGYGLTETGGAGSRVIGPDEAERHGSVGRLAELMEAKIVDPATGEA 328 (493)
Q Consensus 249 ~~l~~lr~v~~~Ge~~~~~~~~~~~~~~~~~~v~~~yG~tE~g~~~~~~~~~~~~~~~~~~g~p~~~~~~~i~d~~~~~~ 328 (493)
..++++|.+++|||++++++.++|.+.+|++++++.||+||++..++............++|+|+++++++|+| +++++
T Consensus 1385 ~~~~~lr~~~~gGe~l~~~~~~~~~~~~~~~~l~n~YG~TE~~~~~~~~~~~~~~~~~~~iG~p~~~~~~~i~d-~~~~~ 1463 (4334)
T PRK05691 1385 AACTSLRRLFSGGEALPAELRNRVLQRLPQVQLHNRYGPTETAINVTHWQCQAEDGERSPIGRPLGNVLCRVLD-AELNL 1463 (4334)
T ss_pred ccCCcccEEEEeecCCCHHHHHHHHHhCCCcEEEeCCCcChheeeeeeeecccccCCCCcccceeCCCEEEEEC-CCCCC
Confidence 35789999999999999999999999998899999999999987655422222233456899999999999999 67899
Q ss_pred CCCCCceEEEEeCccccccccCCcccccccccC-------CCeeeccceEEEcCCCcEEEEcccCCeEEeCceeeChHHH
Q 011116 329 LPPGQKGELWLRGPTIMKGYVGDDKATSETVHS-------EGWLKTGDLCYFDSNGFLFIVDRLKELIKYKAYQVPPVEL 401 (493)
Q Consensus 329 ~~~g~~Gel~v~~~~~~~gy~~~~~~~~~~~~~-------~~~~~TgD~~~~~~~g~~~~~GR~~d~i~~~G~~i~~~~i 401 (493)
++.|..|||+|+|+.+++||+++++.+.+.|.. .+||+|||++++++||.++++||.|++||++|.+|++.+|
T Consensus 1464 vp~G~~GEL~i~G~~v~~GYl~~p~~t~~~f~~~p~~~~~~r~yrTGDl~~~~~dG~l~~~GR~d~qiki~G~rie~~eI 1543 (4334)
T PRK05691 1464 LPPGVAGELCIGGAGLARGYLGRPALTAERFVPDPLGEDGARLYRTGDRARWNADGALEYLGRLDQQVKLRGFRVEPEEI 1543 (4334)
T ss_pred CCCCCceEEEecCcccchhhcCCccccHhhCCCCCCCCCCceEEEccceEEECCCCCEEEecccCcEEEECCEEcCHHHH
Confidence 999999999999999999999999999988743 3599999999999999999999999999999999999999
Q ss_pred HHHHhcCCCcceEEEEeeeCCCCCeeEEEEEEeCCCCCCCHHHHHHHHHhcCCCCCCcceEEEeccccCCCCCccchHHH
Q 011116 402 EHLLHSNPEIADAAVIPYPDEEAGQIPMAFVVRKPGSNITEAEIMDFIAKQVAPYKKIRRVAFINSIPKSTAGKILRREL 481 (493)
Q Consensus 402 e~~l~~~~~v~~~~v~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~l~~~l~~~~~p~~~~~~~~lP~t~~GK~~r~~l 481 (493)
|.+|.++|+|.+++|+...+. .++.++++++...+...+.++++++++++||.|++|..++.++++|+|++||++|+.|
T Consensus 1544 E~~l~~~~~V~~a~v~~~~~~-~~~~lva~~~~~~~~~~~~~~l~~~l~~~Lp~y~vP~~~~~~~~lP~t~~GKidr~~L 1622 (4334)
T PRK05691 1544 QARLLAQPGVAQAAVLVREGA-AGAQLVGYYTGEAGQEAEAERLKAALAAELPEYMVPAQLIRLDQMPLGPSGKLDRRAL 1622 (4334)
T ss_pred HHHHHhCCCcceEEEEEeeCC-CCCEEEEEEEeCCCCCCCHHHHHHHHHHhCccccCCcEEEEccccCCCCCCCcChhhc
Confidence 999999999999999976554 4578889988877766777899999999999999999999999999999999999999
Q ss_pred HHH
Q 011116 482 VTH 484 (493)
Q Consensus 482 ~~~ 484 (493)
++.
T Consensus 1623 ~~~ 1625 (4334)
T PRK05691 1623 PEP 1625 (4334)
T ss_pred Ccc
Confidence 764
No 100
>PTZ00216 acyl-CoA synthetase; Provisional
Probab=100.00 E-value=5.2e-59 Score=489.75 Aligned_cols=460 Identities=21% Similarity=0.274 Sum_probs=347.4
Q ss_pred chhhhHHHHHHhhCCCCCCCEEEEECCCCCCcHHHHHHHHHHcCCeeccCCCCCCHHHHHHHHhhcCCeEEEEcCCCccc
Q 011116 14 SARFTLSHALSKRDSLCRKTTSLTSSPLPPSTSPVLYFSLLSLGVVISPANPLSSTSEVSHQIQLSKPSIAFATSHTSYK 93 (493)
Q Consensus 14 ~~~~~lA~~L~~~~gl~~gd~V~l~~~~~~~~~~~~~lA~~~~G~~~v~i~~~~~~~~l~~~l~~~~~~~il~~~~~~~~ 93 (493)
++++ |++| .+.|+++||+|+++++ |+++|+++++||+++|++++|+++.++.+++.++++++++++++++......
T Consensus 131 ~~~l--A~~L-~~~Gv~~gd~V~i~~~-n~~e~~~~~lA~~~~G~v~vpl~~~~~~~~l~~il~~s~~~~lv~~~~~~~~ 206 (700)
T PTZ00216 131 IVNF--GRGL-AELGLTKGSNVAIYEE-TRWEWLASIYGIWSQSMVAATVYANLGEDALAYALRETECKAIVCNGKNVPN 206 (700)
T ss_pred HHHH--HHHH-HHhCCCCCCEEEEEcC-CCHHHHHHHHHHHHcCCeEEeeCCCCCHHHHHhhhhccCccEEEECHHHHHH
Confidence 4444 9999 7889999999999999 9999999999999999999999999999999999999999999998654332
Q ss_pred CC--------CCCcEEEecCc------------hhhhhhccCcccccccCCCCCCCCCCeEEEEccCCCCCCccceecch
Q 011116 94 LP--------SNLRTILMDSP------------EFISLLNQNEDVADFANSNMTVYQSDPAAILYSSGTTGKVKGVLLSH 153 (493)
Q Consensus 94 ~~--------~~~~~~~~~~~------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~TSGTTG~pK~v~~t~ 153 (493)
+. ....++.++.. .|.++..................++++++++|||||||.||||+++|
T Consensus 207 l~~~~~~~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~a~iiyTSGTTG~PKGV~lth 286 (700)
T PTZ00216 207 LLRLMKSGGMPNTTIIYLDSLPASVDTEGCRLVAWTDVVAKGHSAGSHHPLNIPENNDDLALIMYTSGTTGDPKGVMHTH 286 (700)
T ss_pred HHHhhhhccCCceEEEEECCCccccccCCceEEEHHHHHHhCCccccccccCCCCCcccEEEEEEeCCCCCcCcEEEEEh
Confidence 11 12234444321 23333322210001111223446789999999999999999999999
Q ss_pred HHHHHHHHHhhhhcccCCCCCCCCCCcEEEEecChhHHHHHHHHHHHHhcCCeEEEecCCCHHHHHH-------HHHhcC
Q 011116 154 LNVIAIIAGYYHVTEETDPNEGPPPHPVSFFTLPMFHVFGFFMLVRAASKGETLVFMERFDFEKMLK-------AVENYR 226 (493)
Q Consensus 154 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pl~~~~g~~~~~~~l~~G~~~~~~~~~~~~~~~~-------~l~~~~ 226 (493)
+++.+.+......+... .....+++++++.+|++|.++.......+..|+.+++. ++..+.+ .+++++
T Consensus 287 ~nl~~~~~~~~~~~~~~--~~~~~~~d~~ls~lPl~H~~~~~~~~~~l~~G~~v~~~---~~~~l~~~~~~~~~~l~~~~ 361 (700)
T PTZ00216 287 GSLTAGILALEDRLNDL--IGPPEEDETYCSYLPLAHIMEFGVTNIFLARGALIGFG---SPRTLTDTFARPHGDLTEFR 361 (700)
T ss_pred HHHHHHHHHHHhhcccc--cCCCCCCCEEEEEChHHHHHHHHHHHHHHHcCCEEEEC---CHHHhhhhhccccchHHHcC
Confidence 99998877655443110 00125789999999999999986656667788877663 3455544 678899
Q ss_pred eeecccChHHHHHHHhcccC-------------------------CCCC----------------CCCeeEEEecCCCCC
Q 011116 227 VTYMPVSPPLIVAFINSKLT-------------------------DKYD----------------LSSLQLLGCGGAPLG 265 (493)
Q Consensus 227 ~t~l~~~P~~~~~l~~~~~~-------------------------~~~~----------------l~~lr~v~~~Ge~~~ 265 (493)
||++.++|.+++.+.+.... .+.. .+++|.+++||++++
T Consensus 362 pT~~~~vP~~~~~l~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~v~~~~~~~~g~~lr~i~~GGa~l~ 441 (700)
T PTZ00216 362 PVFLIGVPRIFDTIKKAVEAKLPPVGSLKRRVFDHAYQSRLRALKEGKDTPYWNEKVFSAPRAVLGGRVRAMLSGGGPLS 441 (700)
T ss_pred CcEEEechHHHHHHHHHHHHHHhccCHHHHHHHHHHHHHHHHHHHcCCCCchHHHHHHHHHHHHhCCcEEEEEECCCCCC
Confidence 99999999999887653210 0000 157999999999999
Q ss_pred HHHHHHHHHhCCCCceeccccccccCCccccccCCCCCCCCCccccccCCceEEEEcCCCC-ccCCCCCceEEEEeCccc
Q 011116 266 KEVTLKFKEKFPNVEIRQGYGLTETGGAGSRVIGPDEAERHGSVGRLAELMEAKIVDPATG-EALPPGQKGELWLRGPTI 344 (493)
Q Consensus 266 ~~~~~~~~~~~~~~~v~~~yG~tE~g~~~~~~~~~~~~~~~~~~g~p~~~~~~~i~d~~~~-~~~~~g~~Gel~v~~~~~ 344 (493)
+++.++++..+ + ++++.||+||+++..+.. .......+++|+|+++++++|+|.++. ...+++..|||+++|+.+
T Consensus 442 ~~~~~~~~~~~-~-~l~~~YG~TEt~~~~~~~--~~~~~~~~svG~p~~g~evkI~d~~~~~~~~~~~~~GEL~vrG~~v 517 (700)
T PTZ00216 442 AATQEFVNVVF-G-MVIQGWGLTETVCCGGIQ--RTGDLEPNAVGQLLKGVEMKLLDTEEYKHTDTPEPRGEILLRGPFL 517 (700)
T ss_pred HHHHHHHHHHh-h-hHhhccCccccccccccc--CCCCCCCCCcCCcCCCeEEEEeechhhccCCCCCCCceEEEcCCcc
Confidence 99998888877 6 999999999998655432 222345688999999999999995432 233456689999999999
Q ss_pred cccccCCcccccccccCCCeeeccceEEEcCCCcEEEEcccCCeEE-eCceeeChHHHHHHHhcCCCcceEEEEeeeCCC
Q 011116 345 MKGYVGDDKATSETVHSEGWLKTGDLCYFDSNGFLFIVDRLKELIK-YKAYQVPPVELEHLLHSNPEIADAAVIPYPDEE 423 (493)
Q Consensus 345 ~~gy~~~~~~~~~~~~~~~~~~TgD~~~~~~~g~~~~~GR~~d~i~-~~G~~i~~~~ie~~l~~~~~v~~~~v~~~~~~~ 423 (493)
+.||+++++.+.+.|+.+|||+|||+|++++||.+++.||.+|+|| .+|++|+|.+||+++.++|.|.++.++....+
T Consensus 518 ~~GY~~~pe~T~~~f~~dGw~~TGDig~~d~dG~l~i~GR~kd~ik~~~G~~I~p~eIE~~l~~~p~V~~~~~~v~~~~- 596 (700)
T PTZ00216 518 FKGYYKQEELTREVLDEDGWFHTGDVGSIAANGTLRIIGRVKALAKNCLGEYIALEALEALYGQNELVVPNGVCVLVHP- 596 (700)
T ss_pred cchhcCChhHhhhhccccCCeeccceEEEcCCCcEEEEEehHhheecCCCceeccHHHHHHHhcCcCcccceEEEEEec-
Confidence 9999999999999998899999999999999999999999999999 69999999999999999999997422222222
Q ss_pred CCeeEEEEEEeCCCC--------C--CC------H----HHHHHHH-----HhcCCCCCCcceEEEec------cccCCC
Q 011116 424 AGQIPMAFVVRKPGS--------N--IT------E----AEIMDFI-----AKQVAPYKKIRRVAFIN------SIPKST 472 (493)
Q Consensus 424 ~~~~~~~~v~~~~~~--------~--~~------~----~~l~~~l-----~~~l~~~~~p~~~~~~~------~lP~t~ 472 (493)
....+++++++.... . .+ . +.+.+.+ ++++..+.++++|.+++ .-.+|+
T Consensus 597 ~~~~l~a~vv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~~e~i~~~~~~~~~f~~~~g~lT~ 676 (700)
T PTZ00216 597 ARSYICALVLTDEAKAMAFAKEHGIEGEYPAILKDPEFQKKATESLQETARAAGRKSFEIVRHVRVLSDEWTPENGVLTA 676 (700)
T ss_pred CCceEEEEEecCHHHHHHHHHHcCCCCCHHHHhcCHHHHHHHHHHHHHHHHhcCCCCceeEeEEEEECCCCCCCCCCCCh
Confidence 235678888864210 0 00 0 1222322 23588899999998874 234699
Q ss_pred CCccchHHHHHHHhh
Q 011116 473 AGKILRRELVTHAIS 487 (493)
Q Consensus 473 ~GK~~r~~l~~~~~~ 487 (493)
++|+.|+.+++.+.+
T Consensus 677 t~K~~R~~i~~~y~~ 691 (700)
T PTZ00216 677 AMKLKRRVIDERYAD 691 (700)
T ss_pred hhccchHHHHHHHHH
Confidence 999999999988765
No 101
>PLN02430 long-chain-fatty-acid-CoA ligase
Probab=100.00 E-value=1.5e-58 Score=482.26 Aligned_cols=456 Identities=23% Similarity=0.292 Sum_probs=351.6
Q ss_pred hHHHHHHhhCCCCCCCEEEEECCCCCCcHHHHHHHHHHcCCeeccCCCCCCHHHHHHHHhhcCCeEEEEcCCCcc-cCC-
Q 011116 18 TLSHALSKRDSLCRKTTSLTSSPLPPSTSPVLYFSLLSLGVVISPANPLSSTSEVSHQIQLSKPSIAFATSHTSY-KLP- 95 (493)
Q Consensus 18 ~lA~~L~~~~gl~~gd~V~l~~~~~~~~~~~~~lA~~~~G~~~v~i~~~~~~~~l~~~l~~~~~~~il~~~~~~~-~~~- 95 (493)
++|++| .+.|+++||+|+++++ |+++|+++++||+++|++++|+++.++.+++.++++.+++++++++..... .+.
T Consensus 88 ~lA~~L-~~~Gv~~gd~V~i~~~-n~~ew~~~~lA~~~~G~v~vpl~~~~~~~~l~~il~~~~~~~v~~~~~~~~~~~~~ 165 (660)
T PLN02430 88 QIGSAL-RASGAEPGSRVGIYGS-NCPQWIVAMEACAAHSLICVPLYDTLGPGAVDYIVDHAEIDFVFVQDKKIKELLEP 165 (660)
T ss_pred HHHHHH-HHcCCCCCCEEEEEcC-CCHHHHHHHHHHHHcCCeEEEeccCCCHHHHHHHHhccCCCEEEECHHHHHHHHhh
Confidence 359999 7889999999999999 999999999999999999999999999999999999999999999864221 111
Q ss_pred -----CCCc-EEEecCc----------------hhhhhhccCcccccccCCCCCCCCCCeEEEEccCCCCCCccceecch
Q 011116 96 -----SNLR-TILMDSP----------------EFISLLNQNEDVADFANSNMTVYQSDPAAILYSSGTTGKVKGVLLSH 153 (493)
Q Consensus 96 -----~~~~-~~~~~~~----------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~TSGTTG~pK~v~~t~ 153 (493)
..++ ++.++.. .|.+++.... ..........++++++++|||||||.||||+++|
T Consensus 166 ~~~~~~~l~~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~d~a~iiyTSGTTG~PKGV~lth 242 (660)
T PLN02430 166 DCKSAKRLKAIVSFTSVTEEESDKASQIGVKTYSWIDFLHMGK---ENPSETNPPKPLDICTIMYTSGTSGDPKGVVLTH 242 (660)
T ss_pred hcccCCCceEEEEECCCChHHhhhhhcCCcEEEEHHHHHHhhc---cCCCCCCCcCcCceEEEEECCCCCCCCCEEEeec
Confidence 1122 3333321 1222222111 0011122345789999999999999999999999
Q ss_pred HHHHHHHHHhhhhcccCCCCCCCCCCcEEEEecChhHHHHHHHHHHHHhcCCeEEEecCCCHHHHHHHHHhcCeeecccC
Q 011116 154 LNVIAIIAGYYHVTEETDPNEGPPPHPVSFFTLPMFHVFGFFMLVRAASKGETLVFMERFDFEKMLKAVENYRVTYMPVS 233 (493)
Q Consensus 154 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pl~~~~g~~~~~~~l~~G~~~~~~~~~~~~~~~~~l~~~~~t~l~~~ 233 (493)
+++...+......+.. ....+.++|++++.+|++|.++....+.++..|+++++... ++..+++.+++++||++.++
T Consensus 243 ~~~~~~~~~~~~~~~~--~~~~~~~~d~~ls~lPl~H~~~~~~~~~~l~~G~~i~~~~~-~~~~l~~~l~~~~pt~~~~v 319 (660)
T PLN02430 243 EAVATFVRGVDLFMEQ--FEDKMTHDDVYLSFLPLAHILDRMIEEYFFRKGASVGYYHG-DLNALRDDLMELKPTLLAGV 319 (660)
T ss_pred HHHHHHHHHHHhhccc--cccCCCCCCEEEEeCcHHHHHHHHHHHHHHHcCCEEEEeCC-ChhhHHHHHHHhCCcEEEec
Confidence 9998877654332211 00124688999999999999998666677899999887654 67889999999999999999
Q ss_pred hHHHHHHHhcccC-------------------------------CCCC-------------C-CCeeEEEecCCCCCHHH
Q 011116 234 PPLIVAFINSKLT-------------------------------DKYD-------------L-SSLQLLGCGGAPLGKEV 268 (493)
Q Consensus 234 P~~~~~l~~~~~~-------------------------------~~~~-------------l-~~lr~v~~~Ge~~~~~~ 268 (493)
|.++..+.+.... .... + .++|.+++||+++++++
T Consensus 320 P~~~~~l~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~l~~~~i~~~~G~~lr~~~~gga~l~~~~ 399 (660)
T PLN02430 320 PRVFERIHEGIQKALQELNPRRRLIFNALYKYKLAWMNRGYSHKKASPMADFLAFRKVKAKLGGRLRLLISGGAPLSTEI 399 (660)
T ss_pred HHHHHHHHHHHHHHHhccCHHHHHHHHHHHHHHHHHHhcCCCCCCcchhHHHHHHHHHHHHhCCeEEEEEECCCCCCHHH
Confidence 9999887652110 0000 1 57999999999999998
Q ss_pred HHHHHHhCCCCceeccccccccCCccccccCCCCCCCCCccccccCCceEEEEcC-CCC-ccCCCCCceEEEEeCccccc
Q 011116 269 TLKFKEKFPNVEIRQGYGLTETGGAGSRVIGPDEAERHGSVGRLAELMEAKIVDP-ATG-EALPPGQKGELWLRGPTIMK 346 (493)
Q Consensus 269 ~~~~~~~~~~~~v~~~yG~tE~g~~~~~~~~~~~~~~~~~~g~p~~~~~~~i~d~-~~~-~~~~~g~~Gel~v~~~~~~~ 346 (493)
.++++... ++.+++.||+||+++.++.. ........+++|.|.+++++++.|. +.+ .+.+.+..|||+++|+.++.
T Consensus 400 ~~~~~~~~-~~~i~~~YG~TE~~~~~~~~-~~~~~~~~gsvG~p~~~~evki~d~~~~g~~~~~~~~~GEi~vrg~~v~~ 477 (660)
T PLN02430 400 EEFLRVTS-CAFVVQGYGLTETLGPTTLG-FPDEMCMLGTVGAPAVYNELRLEEVPEMGYDPLGEPPRGEICVRGKCLFS 477 (660)
T ss_pred HHHHHHhc-CCCeeeecchhhhhhceEee-ccccCCCCCCccCCCCceEEEEEEcCCcCcccCCCCCcceEEecCCCccc
Confidence 77665543 57899999999998765542 2222334689999999999999873 333 44555678999999999999
Q ss_pred cccCCcccccccccCCCeeeccceEEEcCCCcEEEEcccCCeEEe-CceeeChHHHHHHHhcCCCcceEEEEeeeCCCCC
Q 011116 347 GYVGDDKATSETVHSEGWLKTGDLCYFDSNGFLFIVDRLKELIKY-KAYQVPPVELEHLLHSNPEIADAAVIPYPDEEAG 425 (493)
Q Consensus 347 gy~~~~~~~~~~~~~~~~~~TgD~~~~~~~g~~~~~GR~~d~i~~-~G~~i~~~~ie~~l~~~~~v~~~~v~~~~~~~~~ 425 (493)
||+++++.+.+.| .+|||+|||+|++++||++++.||.+|+||+ +|++|+|.+||+++.++|.|.+++|++. ..+
T Consensus 478 GY~~~~e~t~~~~-~dGw~~TGDig~~d~dG~l~i~gR~kd~ik~~~G~~V~p~~IE~~l~~~p~V~~~~V~G~---~~~ 553 (660)
T PLN02430 478 GYYKNPELTEEVM-KDGWFHTGDIGEILPNGVLKIIDRKKNLIKLSQGEYVALEYLENVYGQNPIVEDIWVYGD---SFK 553 (660)
T ss_pred cccCChHHhhhhh-hccceeccceEEECCCCcEEEEEcccccEEcCCCcEEchHHHHHHHhcCCCeeEEEEEec---CCc
Confidence 9999999999888 5899999999999999999999999999997 7999999999999999999999999984 235
Q ss_pred eeEEEEEEeCCCC--------C--CC----------HHHHHHHH-----HhcCCCCCCcceEEEecc-c-----cCCCCC
Q 011116 426 QIPMAFVVRKPGS--------N--IT----------EAEIMDFI-----AKQVAPYKKIRRVAFINS-I-----PKSTAG 474 (493)
Q Consensus 426 ~~~~~~v~~~~~~--------~--~~----------~~~l~~~l-----~~~l~~~~~p~~~~~~~~-l-----P~t~~G 474 (493)
+.++++|++.+.. . .+ .+.+.+.+ +++|+.+.++++|.++++ + .+|+++
T Consensus 554 ~~~~A~vv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~i~~~~~~~~l~~~e~i~~~~l~~~~~~~~~g~lT~t~ 633 (660)
T PLN02430 554 SMLVAVVVPNEENTNKWAKDNGFTGSFEELCSLPELKEHILSELKSTAEKNKLRGFEYIKGVILETKPFDVERDLVTATL 633 (660)
T ss_pred ceEEEEEEcCHHHHHHHHHhCCCCCCHHHHhcCHHHHHHHHHHHHHHHHHhCCCCceeeeEEEEECCCCCCcCCcCChhh
Confidence 6788898875421 0 01 11122222 235999999999998753 2 489999
Q ss_pred ccchHHHHHHHhh
Q 011116 475 KILRRELVTHAIS 487 (493)
Q Consensus 475 K~~r~~l~~~~~~ 487 (493)
|+.|+.+.+.+.+
T Consensus 634 K~~R~~i~~~y~~ 646 (660)
T PLN02430 634 KKRRNNLLKYYQV 646 (660)
T ss_pred hhhhHHHHHHHHH
Confidence 9999999888765
No 102
>PRK07798 acyl-CoA synthetase; Validated
Probab=100.00 E-value=1.5e-57 Score=468.37 Aligned_cols=456 Identities=23% Similarity=0.305 Sum_probs=368.8
Q ss_pred HHHHHHhhCCCCCCCEEEEECCCCCCcHHHHHHHHHHcCCeeccCCCCCCHHHHHHHHhhcCCeEEEEcCCCcccCCC--
Q 011116 19 LSHALSKRDSLCRKTTSLTSSPLPPSTSPVLYFSLLSLGVVISPANPLSSTSEVSHQIQLSKPSIAFATSHTSYKLPS-- 96 (493)
Q Consensus 19 lA~~L~~~~gl~~gd~V~l~~~~~~~~~~~~~lA~~~~G~~~v~i~~~~~~~~l~~~l~~~~~~~il~~~~~~~~~~~-- 96 (493)
+|++| .+.|+++||+|+++++ |+++++++++||+++|++++|+++.++.+++.++++++++++++++......+.+
T Consensus 41 la~~L-~~~g~~~~~~v~v~~~-n~~~~~~~~~a~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~ 118 (533)
T PRK07798 41 LAHYL-IAQGLGPGDHVGIYAR-NRIEYVEAMLGAFKARAVPVNVNYRYVEDELRYLLDDSDAVALVYEREFAPRVAEVL 118 (533)
T ss_pred HHHHH-HHcCCCCCCEEEEEcC-CCHHHHHHHHHHHhcCeEEEecCcCCCHHHHHHHHhhcCCCEEEEchhhHHHHHHHh
Confidence 49999 7789999999999999 9999999999999999999999999999999999999999999998764433221
Q ss_pred ----CC-cEEEecCc----------hhhhhhccCcccccccCCCCCCCCCCeEEEEccCCCCCCccceecchHHHHHHHH
Q 011116 97 ----NL-RTILMDSP----------EFISLLNQNEDVADFANSNMTVYQSDPAAILYSSGTTGKVKGVLLSHLNVIAIIA 161 (493)
Q Consensus 97 ----~~-~~~~~~~~----------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~TSGTTG~pK~v~~t~~~~~~~~~ 161 (493)
.. .++.++.. .+.+++.... . .. .......+.++++|||||||.||+|+++|.++.....
T Consensus 119 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~-~~-~~~~~~~~~~~i~~TSGTTG~PK~v~~s~~~~~~~~~ 193 (533)
T PRK07798 119 PRLPKLRTLVVVEDGSGNDLLPGAVDYEDALAAGS---P-ER-DFGERSPDDLYLLYTGGTTGMPKGVMWRQEDIFRVLL 193 (533)
T ss_pred ccCCCccEEEEecCCcccccCCccccHHHHHhccC---C-cC-CCCCCCCCceEEEECCCCCCCCcEEEEecHHHHHHHh
Confidence 11 23333321 2333332211 0 11 1112234557999999999999999999999976555
Q ss_pred HhhhhcccCC--CCCCC------CCCcEEEEecChhHHHHHHHHHHHHhcCCeEEEec--CCCHHHHHHHHHhcCeeecc
Q 011116 162 GYYHVTEETD--PNEGP------PPHPVSFFTLPMFHVFGFFMLVRAASKGETLVFME--RFDFEKMLKAVENYRVTYMP 231 (493)
Q Consensus 162 ~~~~~~~~~~--~~~~~------~~~~~~~~~~pl~~~~g~~~~~~~l~~G~~~~~~~--~~~~~~~~~~l~~~~~t~l~ 231 (493)
.....+.... ....+ ..+++++..+|++|..+++.++.++..|+++++.+ .+++..+++.++++++|++.
T Consensus 194 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pl~~~~~~~~~~~~l~~G~~~~~~~~~~~~~~~~~~~i~~~~~t~~~ 273 (533)
T PRK07798 194 GGRDFATGEPIEDEEELAKRAAAGPGMRRFPAPPLMHGAGQWAAFAALFSGQTVVLLPDVRFDADEVWRTIEREKVNVIT 273 (533)
T ss_pred hhhhhhcccchhhhhhhcccccCCCCceEEEecchhhhhhHHHHHHHHhcCceEEEecCCCcCHHHHHHHHHHhCCeEEE
Confidence 4332210000 00011 46788999999999999999999999999999998 78899999999999999999
Q ss_pred cChHHHHH-HHhccc-CCCCCCCCeeEEEecCCCCCHHHHHHHHHhCCCCceeccccccccCCccccccCCCCCCCCCcc
Q 011116 232 VSPPLIVA-FINSKL-TDKYDLSSLQLLGCGGAPLGKEVTLKFKEKFPNVEIRQGYGLTETGGAGSRVIGPDEAERHGSV 309 (493)
Q Consensus 232 ~~P~~~~~-l~~~~~-~~~~~l~~lr~v~~~Ge~~~~~~~~~~~~~~~~~~v~~~yG~tE~g~~~~~~~~~~~~~~~~~~ 309 (493)
++|..+.. +.+... .....++++|.+++||+++++++.+++++.|++..+++.||+||++........ . .....
T Consensus 274 ~~~~~~~~~l~~~~~~~~~~~~~~l~~i~~gG~~~~~~~~~~~~~~~~~~~~~~~YG~tE~~~~~~~~~~-~---~~~~~ 349 (533)
T PRK07798 274 IVGDAMARPLLDALEARGPYDLSSLFAIASGGALFSPSVKEALLELLPNVVLTDSIGSSETGFGGSGTVA-K---GAVHT 349 (533)
T ss_pred echHHHHHHHHHHhcccccCCCCceEEEEECCCCCCHHHHHHHHHHcCCCeEEeeecccccccccccCCC-C---CCccC
Confidence 99876543 333322 234557899999999999999999999999988999999999999765443211 1 11123
Q ss_pred c--cccCCceEEEEcCCCCccCCCCCc--eEEEEeCccccccccCCccccccccc---CCCeeeccceEEEcCCCcEEEE
Q 011116 310 G--RLAELMEAKIVDPATGEALPPGQK--GELWLRGPTIMKGYVGDDKATSETVH---SEGWLKTGDLCYFDSNGFLFIV 382 (493)
Q Consensus 310 g--~p~~~~~~~i~d~~~~~~~~~g~~--Gel~v~~~~~~~gy~~~~~~~~~~~~---~~~~~~TgD~~~~~~~g~~~~~ 382 (493)
| .+.++..++++| +++++++.|+. |+++. ++.+..||+++++.+...|. ..+||+|||+++++++|.+++.
T Consensus 350 g~~~~~~~~~~~i~~-~~~~~~~~g~~~~g~l~~-~~~~~~gy~~~~~~t~~~f~~~~~~~~~~TGD~~~~~~~g~l~~~ 427 (533)
T PRK07798 350 GGPRFTIGPRTVVLD-EDGNPVEPGSGEIGWIAR-RGHIPLGYYKDPEKTAETFPTIDGVRYAIPGDRARVEADGTITLL 427 (533)
T ss_pred CCCccCCCceEEEEC-CCCCCCCCCCCCeeEEEe-ecCccccccCChhhhHHhhccCCCCceEEcCcEEEEcCCCcEEEE
Confidence 3 678899999999 56778888887 77765 56799999999988887763 2469999999999999999999
Q ss_pred cccCCeEEeCceeeChHHHHHHHhcCCCcceEEEEeeeCCCCCeeEEEEEEeCCCCCCCHHHHHHHHHhcCCCCCCcceE
Q 011116 383 DRLKELIKYKAYQVPPVELEHLLHSNPEIADAAVIPYPDEEAGQIPMAFVVRKPGSNITEAEIMDFIAKQVAPYKKIRRV 462 (493)
Q Consensus 383 GR~~d~i~~~G~~i~~~~ie~~l~~~~~v~~~~v~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~l~~~l~~~~~p~~~ 462 (493)
||.+|+|+.+|.+|++.+||+++.++++|.++++++.+++..++.+.+++++.++...+.++++++++++|+.+++|+.+
T Consensus 428 GR~~~~i~~~G~~v~~~eIE~~l~~~~~v~~~~v~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~l~~~l~~~~~P~~i 507 (533)
T PRK07798 428 GRGSVCINTGGEKVFPEEVEEALKAHPDVADALVVGVPDERWGQEVVAVVQLREGARPDLAELRAHCRSSLAGYKVPRAI 507 (533)
T ss_pred ccccceEecCCEEeCHHHHHHHHHhCccceeEEEEeccCcccCceEEEEEEECCCCCCCHHHHHHHHhhhcccCCCCeEE
Confidence 99999999999999999999999999999999999988877788889999988777778899999999999999999999
Q ss_pred EEeccccCCCCCccchHHHHHHHhh
Q 011116 463 AFINSIPKSTAGKILRRELVTHAIS 487 (493)
Q Consensus 463 ~~~~~lP~t~~GK~~r~~l~~~~~~ 487 (493)
++++++|+|.+||++|+.|++++.+
T Consensus 508 ~~~~~iP~t~~GK~~~~~~~~~~~~ 532 (533)
T PRK07798 508 WFVDEVQRSPAGKADYRWAKEQAAE 532 (533)
T ss_pred EEcccCCCCCcchhhHHHHhhhhcc
Confidence 9999999999999999999999875
No 103
>PRK05691 peptide synthase; Validated
Probab=100.00 E-value=1.2e-58 Score=560.66 Aligned_cols=449 Identities=19% Similarity=0.249 Sum_probs=379.1
Q ss_pred cchhhhHHHHHHhhCCCCCCCEEEEECCCCCCcHHHHHHHHHHcCCeeccCCCCCCHHHHHHHHhhcCCeEEEEcCCCcc
Q 011116 13 SSARFTLSHALSKRDSLCRKTTSLTSSPLPPSTSPVLYFSLLSLGVVISPANPLSSTSEVSHQIQLSKPSIAFATSHTSY 92 (493)
Q Consensus 13 ~~~~~~lA~~L~~~~gl~~gd~V~l~~~~~~~~~~~~~lA~~~~G~~~v~i~~~~~~~~l~~~l~~~~~~~il~~~~~~~ 92 (493)
+++++ |++| .+.|+++|++|+++++ ++++++++++|++++|++++|++|.++.+.+.++++.+++++++++.....
T Consensus 3754 ~~~~l--a~~L-~~~gv~~~~~V~v~~~-~s~~~~v~~lavlkaG~a~vpld~~~p~~r~~~il~~~~~~~~l~~~~~~~ 3829 (4334)
T PRK05691 3754 AANRL--GHAL-RAAGVGVDQPVALLAE-RGLDLLGMIVGSFKAGAGYLPLDPGLPAQRLQRIIELSRTPVLVCSAACRE 3829 (4334)
T ss_pred HHHHH--HHHH-HHcCCCCCCEEEEEeC-CCHHHHHHHHHHHhhCcEEeCCCCCChHHHHHHHHHhcCCCEEEecCcccc
Confidence 35555 9999 7889999999999999 999999999999999999999999999999999999999999999986544
Q ss_pred cCCC---C-----CcEEEecCchhhhhhccCcccccccCCCCCCCCCCeEEEEccCCCCCCccceecchHHHHHHHHHhh
Q 011116 93 KLPS---N-----LRTILMDSPEFISLLNQNEDVADFANSNMTVYQSDPAAILYSSGTTGKVKGVLLSHLNVIAIIAGYY 164 (493)
Q Consensus 93 ~~~~---~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~TSGTTG~pK~v~~t~~~~~~~~~~~~ 164 (493)
.... . ...+.+.+ +...... ..........+++++|++|||||||.||||+++|+++.+.+.+..
T Consensus 3830 ~~~~~~~~~~~~~~~~~~~~~----~~~~~~~---~~~~~~~~~~~~~~ayvi~TSGSTG~PKGV~~~h~~~~~~~~~~~ 3902 (4334)
T PRK05691 3830 QARALLDELGCANRPRLLVWE----EVQAGEV---ASHNPGIYSGPDNLAYVIYTSGSTGLPKGVMVEQRGMLNNQLSKV 3902 (4334)
T ss_pred hhhhhhcccccccccceeeec----ccccccc---cccCCCCCCCCCceEEEEECCCCCCCCCEEEeehHHHHHHHHHHH
Confidence 3221 0 01111111 0101000 111222345689999999999999999999999999999888877
Q ss_pred hhcccCCCCCCCCCCcEEEEecChhHHHHHHHHHHHHhcCCeEEEecC---CCHHHHHHHHHhcCeeecccChHHHHHHH
Q 011116 165 HVTEETDPNEGPPPHPVSFFTLPMFHVFGFFMLVRAASKGETLVFMER---FDFEKMLKAVENYRVTYMPVSPPLIVAFI 241 (493)
Q Consensus 165 ~~~~~~~~~~~~~~~~~~~~~~pl~~~~g~~~~~~~l~~G~~~~~~~~---~~~~~~~~~l~~~~~t~l~~~P~~~~~l~ 241 (493)
..+. +++.++++...++.+..+.+.++.++..|+++++.+. .++..+++.++++++|++.++|+++..++
T Consensus 3903 ~~~~-------~~~~~~~~~~~s~~fd~s~~~~~~~l~~G~~l~i~~~~~~~~~~~l~~~~~~~~vt~~~~~Ps~~~~l~ 3975 (4334)
T PRK05691 3903 PYLA-------LSEADVIAQTASQSFDISVWQFLAAPLFGARVEIVPNAIAHDPQGLLAHVQAQGITVLESVPSLIQGML 3975 (4334)
T ss_pred HhcC-------CCccceEEEecCCchhHHHHHHHHHHhCCCEEEEcCccccCCHHHHHHHHHHcCCeEEEeCHHHHHHHH
Confidence 7764 4899999999999999999999999999999999853 57899999999999999999999999887
Q ss_pred hcccCCCCCCCCeeEEEecCCCCCHHHHHHHHHhCCCCceeccccccccCCccccccCCCC--CCCCCccccccCCceEE
Q 011116 242 NSKLTDKYDLSSLQLLGCGGAPLGKEVTLKFKEKFPNVEIRQGYGLTETGGAGSRVIGPDE--AERHGSVGRLAELMEAK 319 (493)
Q Consensus 242 ~~~~~~~~~l~~lr~v~~~Ge~~~~~~~~~~~~~~~~~~v~~~yG~tE~g~~~~~~~~~~~--~~~~~~~g~p~~~~~~~ 319 (493)
... ...+++||.+++|||++++++.+.|.+.++++++++.||+||++..++....... ......+|+|++++++.
T Consensus 3976 ~~~---~~~~~~lr~~~~gGe~l~~~~~~~~~~~~~~~~l~n~YG~TE~t~~~~~~~~~~~~~~~~~~~iG~p~~~~~~~ 4052 (4334)
T PRK05691 3976 AED---RQALDGLRWMLPTGEAMPPELARQWLQRYPQIGLVNAYGPAECSDDVAFFRVDLASTRGSYLPIGSPTDNNRLY 4052 (4334)
T ss_pred hhc---cccCCCceEEEecCCcCCHHHHHHHHHhCCCCeEEeCccCccceeEEEEEEcccccccCCcCCCCCccCCCEEE
Confidence 643 2346789999999999999999999998889999999999999876654322211 12345799999999999
Q ss_pred EEcCCCCccCCCCCceEEEEeCccccccccCCccccccccc-------CCCeeeccceEEEcCCCcEEEEcccCCeEEeC
Q 011116 320 IVDPATGEALPPGQKGELWLRGPTIMKGYVGDDKATSETVH-------SEGWLKTGDLCYFDSNGFLFIVDRLKELIKYK 392 (493)
Q Consensus 320 i~d~~~~~~~~~g~~Gel~v~~~~~~~gy~~~~~~~~~~~~-------~~~~~~TgD~~~~~~~g~~~~~GR~~d~i~~~ 392 (493)
|+| +.++++|.|..|||+|+|+.+++||+++++.|.+.|. +++||+|||++++++||.++|+||.|++||++
T Consensus 4053 v~d-~~~~~~p~g~~GEL~i~G~~v~~GY~~~~~~t~~~f~~~p~~~~~~~~yrTGDl~~~~~dG~l~~~GR~d~qvki~ 4131 (4334)
T PRK05691 4053 LLD-EALELVPLGAVGELCVAGTGVGRGYVGDPLRTALAFVPHPFGAPGERLYRTGDLARRRSDGVLEYVGRIDHQVKIR 4131 (4334)
T ss_pred EEC-CCCCCCCCCCceEEEEecccccccccCCcccchhhcccCCCCCCCceeeccCcceeecCCCcEEEecccCCcEEec
Confidence 999 7899999999999999999999999999999999884 34699999999999999999999999999999
Q ss_pred ceeeChHHHHHHHhcCCCcceEEEEeeeCCCCCeeEEEEEEeCCCCCC---CHHHHHHHHHhcCCCCCCcceEEEecccc
Q 011116 393 AYQVPPVELEHLLHSNPEIADAAVIPYPDEEAGQIPMAFVVRKPGSNI---TEAEIMDFIAKQVAPYKKIRRVAFINSIP 469 (493)
Q Consensus 393 G~~i~~~~ie~~l~~~~~v~~~~v~~~~~~~~~~~~~~~v~~~~~~~~---~~~~l~~~l~~~l~~~~~p~~~~~~~~lP 469 (493)
|.+|.+.|||++|.++|+|.+++|+... ...++.++++++....... ..++++++++++||.|++|..++.+++||
T Consensus 4132 G~riel~eIE~~l~~~~~v~~a~v~~~~-~~~~~~l~a~~~~~~~~~~~~~~~~~l~~~l~~~Lp~ymvP~~~~~~~~lP 4210 (4334)
T PRK05691 4132 GYRIELGEIEARLHEQAEVREAAVAVQE-GVNGKHLVGYLVPHQTVLAQGALLERIKQRLRAELPDYMVPLHWLWLDRLP 4210 (4334)
T ss_pred eEEecHHHHHHHHHhCCCccEEEEEEec-CCCCcEEEEEEeCCcccccchHHHHHHHHHHHhhCChhhcCcceeecccCC
Confidence 9999999999999999999998886554 3456788899887654322 23678999999999999999999999999
Q ss_pred CCCCCccchHHHHHH
Q 011116 470 KSTAGKILRRELVTH 484 (493)
Q Consensus 470 ~t~~GK~~r~~l~~~ 484 (493)
+|++||++|+.|++.
T Consensus 4211 ~t~~GKidr~~L~~~ 4225 (4334)
T PRK05691 4211 LNANGKLDRKALPAL 4225 (4334)
T ss_pred CCCCCcccHhhcCCC
Confidence 999999999999875
No 104
>PRK06814 acylglycerophosphoethanolamine acyltransferase; Provisional
Probab=100.00 E-value=8.8e-58 Score=508.14 Aligned_cols=447 Identities=23% Similarity=0.314 Sum_probs=366.9
Q ss_pred hHHHHHHhhCCCCCCCEEEEECCCCCCcHHHHHHHHHHcCCeeccCCCCCCHHHHHHHHhhcCCeEEEEcCCCccc----
Q 011116 18 TLSHALSKRDSLCRKTTSLTSSPLPPSTSPVLYFSLLSLGVVISPANPLSSTSEVSHQIQLSKPSIAFATSHTSYK---- 93 (493)
Q Consensus 18 ~lA~~L~~~~gl~~gd~V~l~~~~~~~~~~~~~lA~~~~G~~~v~i~~~~~~~~l~~~l~~~~~~~il~~~~~~~~---- 93 (493)
++|++| ++ |+++||+|+++++ |+++++++++||+++|++++|+++..+.+++.+++++++++.++++++....
T Consensus 670 ~lA~~L-~~-g~~~gd~V~i~~~-n~~~~~~~~la~~~~G~v~v~l~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~~~~~ 746 (1140)
T PRK06814 670 VLGRKL-KK-NTPPGENVGVMLP-NANGAAVTFFALQSAGRVPAMINFSAGIANILSACKAAQVKTVLTSRAFIEKARLG 746 (1140)
T ss_pred HHHHHH-Hh-cCCCCCeEEEEcC-CchHHHHHHHHHHHCCCEEEEcCCCCCHHHHHHHHHHcCCCEEEecHHHHhhhcch
Confidence 348888 55 9999999999999 9999999999999999999999999999999999999999999998653321
Q ss_pred -----CCCCCcEEEecCch-----hhhhhccCcccccccCCCCCCCCCCeEEEEccCCCCCCccceecchHHHHHHHHHh
Q 011116 94 -----LPSNLRTILMDSPE-----FISLLNQNEDVADFANSNMTVYQSDPAAILYSSGTTGKVKGVLLSHLNVIAIIAGY 163 (493)
Q Consensus 94 -----~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~TSGTTG~pK~v~~t~~~~~~~~~~~ 163 (493)
+....+++.+++.. +..+...... ..+........++|+++++|||||||.||+|.++|+++.......
T Consensus 747 ~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~d~a~i~~TSGTTG~PKgv~~sh~~~~~~~~~~ 825 (1140)
T PRK06814 747 PLIEALEFGIRIIYLEDVRAQIGLADKIKGLLAG-RFPLVYFCNRDPDDPAVILFTSGSEGTPKGVVLSHRNLLANRAQV 825 (1140)
T ss_pred hHHHHhccCceEEEehHhhccCChHHHHHHHhhc-cCCccccCCCCCCCcEEEEECCCccCCCcEEEecHHHHHHHHHHH
Confidence 11123344443211 0000000000 000111113567999999999999999999999999998888777
Q ss_pred hhhcccCCCCCCCCCCcEEEEecChhHHHHH-HHHHHHHhcCCeEEEec-CCCHHHHHHHHHhcCeeecccChHHHHHHH
Q 011116 164 YHVTEETDPNEGPPPHPVSFFTLPMFHVFGF-FMLVRAASKGETLVFME-RFDFEKMLKAVENYRVTYMPVSPPLIVAFI 241 (493)
Q Consensus 164 ~~~~~~~~~~~~~~~~~~~~~~~pl~~~~g~-~~~~~~l~~G~~~~~~~-~~~~~~~~~~l~~~~~t~l~~~P~~~~~l~ 241 (493)
...+. ..++|++++.+|++|..++ ..++.++..|+++++.+ ..+...+.+.++++++|++.++|+++..+.
T Consensus 826 ~~~~~-------~~~~d~~l~~~pl~h~~g~~~~~~~~l~~G~~~~~~~~~~~~~~~~~~i~~~~~t~~~~~p~~l~~l~ 898 (1140)
T PRK06814 826 AARID-------FSPEDKVFNALPVFHSFGLTGGLVLPLLSGVKVFLYPSPLHYRIIPELIYDTNATILFGTDTFLNGYA 898 (1140)
T ss_pred HHhhC-------CCCcCEEEEecchHHHHHHHHHHHHHHHcCCEEEEecCcccHHHHHHHHHhcCCEEEEecHHHHHHHH
Confidence 66663 4789999999999999998 67888999999999875 356778899999999999999999999887
Q ss_pred hcccCCCCCCCCeeEEEecCCCCCHHHHHHHHHhCCCCceeccccccccCCccccccCCCCCCCCCccccccCCceEEEE
Q 011116 242 NSKLTDKYDLSSLQLLGCGGAPLGKEVTLKFKEKFPNVEIRQGYGLTETGGAGSRVIGPDEAERHGSVGRLAELMEAKIV 321 (493)
Q Consensus 242 ~~~~~~~~~l~~lr~v~~~Ge~~~~~~~~~~~~~~~~~~v~~~yG~tE~g~~~~~~~~~~~~~~~~~~g~p~~~~~~~i~ 321 (493)
+.. ...+++++|.+++|||++++++.+.+.+.+ ++++++.||+||++...... .+.....+++|+|.+++++++.
T Consensus 899 ~~~--~~~~~~~lr~v~~gg~~l~~~~~~~~~~~~-~~~~~~~YG~TE~~~~~~~~--~~~~~~~~~vG~p~~g~~~~~~ 973 (1140)
T PRK06814 899 RYA--HPYDFRSLRYVFAGAEKVKEETRQTWMEKF-GIRILEGYGVTETAPVIALN--TPMHNKAGTVGRLLPGIEYRLE 973 (1140)
T ss_pred hhc--ccccccceeEEEEcCCcCCHHHHHHHHHHh-CCcEEeccccccccceEEec--CCCCCCCCcCCccCCCCeEEEe
Confidence 653 345578999999999999999999999998 89999999999998765542 2223456789999999999998
Q ss_pred cCCCCccCCCCCceEEEEeCccccccccCCcccccccccCCCeeeccceEEEcCCCcEEEEcccCCeEEeCceeeChHHH
Q 011116 322 DPATGEALPPGQKGELWLRGPTIMKGYVGDDKATSETVHSEGWLKTGDLCYFDSNGFLFIVDRLKELIKYKAYQVPPVEL 401 (493)
Q Consensus 322 d~~~~~~~~~g~~Gel~v~~~~~~~gy~~~~~~~~~~~~~~~~~~TgD~~~~~~~g~~~~~GR~~d~i~~~G~~i~~~~i 401 (493)
+.+ + .++.|||+++|+.++.||+++++........+|||+|||++++|+||.+++.||.||+||++|++|+|.+|
T Consensus 974 ~~~-~----~~~~Gel~v~g~~~~~gY~~~~~~~~~~~~~~g~~~TGDl~~~d~dG~l~~~GR~~d~i~~~G~~v~~~eI 1048 (1140)
T PRK06814 974 PVP-G----IDEGGRLFVRGPNVMLGYLRAENPGVLEPPADGWYDTGDIVTIDEEGFITIKGRAKRFAKIAGEMISLAAV 1048 (1140)
T ss_pred ecC-C----CCCceEEEEeCCCcchhhcCCCCCCccccCCCCeEecCCEEEECCCCeEEEEecccCeeeeCCEEECHHHH
Confidence 732 2 35779999999999999998765332222257999999999999999999999999999999999999999
Q ss_pred HHHHhcCCCcceEEEEeeeCCCCCeeEEEEEEeCCCCCCCHHHHHHHHHhc-CCCCCCcceEEEeccccCCCCCccchHH
Q 011116 402 EHLLHSNPEIADAAVIPYPDEEAGQIPMAFVVRKPGSNITEAEIMDFIAKQ-VAPYKKIRRVAFINSIPKSTAGKILRRE 480 (493)
Q Consensus 402 e~~l~~~~~v~~~~v~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~l~~~-l~~~~~p~~~~~~~~lP~t~~GK~~r~~ 480 (493)
|+++.+++.+.++++++.+++..++.+++++. ..+.+.+++.++++++ ++++++|..+++++++|+|++||++|+.
T Consensus 1049 E~~l~~~~~v~~~~vv~~~~~~~g~~~~~~~~---~~~~~~~~l~~~~~~~~l~~~~~P~~i~~v~~lP~t~~GKi~r~~ 1125 (1140)
T PRK06814 1049 EELAAELWPDALHAAVSIPDARKGERIILLTT---ASDATRAAFLAHAKAAGASELMVPAEIITIDEIPLLGTGKIDYVA 1125 (1140)
T ss_pred HHHHHhcCCcccEEEEEcccCCCCceEEEEEc---CCCcCHHHHHHHHHHcCCCcccCCcEEEEecCcCCCCCCCCcHHH
Confidence 99999999999999999998888887766654 2346678899999874 9999999999999999999999999999
Q ss_pred HHHHHhhC
Q 011116 481 LVTHAISG 488 (493)
Q Consensus 481 l~~~~~~~ 488 (493)
|++++...
T Consensus 1126 L~~~~~~~ 1133 (1140)
T PRK06814 1126 VTKLAEEA 1133 (1140)
T ss_pred HHHHHHHh
Confidence 99987763
No 105
>PRK08162 acyl-CoA synthetase; Validated
Probab=100.00 E-value=2.1e-57 Score=467.80 Aligned_cols=454 Identities=27% Similarity=0.402 Sum_probs=364.7
Q ss_pred hHHHHHHhhCCCCCCCEEEEECCCCCCcHHHHHHHHHHcCCeeccCCCCCCHHHHHHHHhhcCCeEEEEcCCCcccCCC-
Q 011116 18 TLSHALSKRDSLCRKTTSLTSSPLPPSTSPVLYFSLLSLGVVISPANPLSSTSEVSHQIQLSKPSIAFATSHTSYKLPS- 96 (493)
Q Consensus 18 ~lA~~L~~~~gl~~gd~V~l~~~~~~~~~~~~~lA~~~~G~~~v~i~~~~~~~~l~~~l~~~~~~~il~~~~~~~~~~~- 96 (493)
++|.+| .+.|+++||+|+++++ |+++++++++||+++|++++|+++.++.+++..+++.++++.++++++....+.+
T Consensus 55 ~~a~~L-~~~g~~~g~~v~i~~~-~~~~~~~~~lA~~~~G~~~vpl~~~~~~~~~~~~l~~~~~~~i~~~~~~~~~~~~~ 132 (545)
T PRK08162 55 RLASAL-ARRGIGRGDTVAVLLP-NIPAMVEAHFGVPMAGAVLNTLNTRLDAASIAFMLRHGEAKVLIVDTEFAEVAREA 132 (545)
T ss_pred HHHHHH-HHhCCCCCCEEEEECC-CchHHHHHHHHHHHhCcEEeccccccChHHHHHHHHhCCCeEEEEccchhhHHHHH
Confidence 359999 7789999999999999 9999999999999999999999999999999999999999999999876543321
Q ss_pred -----CCcEEEec--C-----------chhhhhhccCcccccccCCCCCCCCCCeEEEEccCCCCCCccceecchHHHHH
Q 011116 97 -----NLRTILMD--S-----------PEFISLLNQNEDVADFANSNMTVYQSDPAAILYSSGTTGKVKGVLLSHLNVIA 158 (493)
Q Consensus 97 -----~~~~~~~~--~-----------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~TSGTTG~pK~v~~t~~~~~~ 158 (493)
..+.+.++ . .++..++.... +........+..++++++|||||||.||+|.++|.++..
T Consensus 133 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~i~~TSGTTG~PKgv~~t~~~~~~ 209 (545)
T PRK08162 133 LALLPGPKPLVIDVDDPEYPGGRFIGALDYEAFLASGD---PDFAWTLPADEWDAIALNYTSGTTGNPKGVVYHHRGAYL 209 (545)
T ss_pred HhhCCCCceEEEecCccccccCCCcccccHHHHhccCC---ccccccCCCCCCCeEEEEeCCCCCCCCcEEEEecHHHHH
Confidence 11122221 1 12333322211 101111223456789999999999999999999998766
Q ss_pred HHHHhhhhcccCCCCCCCCCCcEEEEecChhHHHHHHHHHHHHhcCCeEEEecCCCHHHHHHHHHhcCeeecccChHHHH
Q 011116 159 IIAGYYHVTEETDPNEGPPPHPVSFFTLPMFHVFGFFMLVRAASKGETLVFMERFDFEKMLKAVENYRVTYMPVSPPLIV 238 (493)
Q Consensus 159 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~pl~~~~g~~~~~~~l~~G~~~~~~~~~~~~~~~~~l~~~~~t~l~~~P~~~~ 238 (493)
........+ .+..++++++.+|++|..++...+...+.|++.++...+++..+++.++++++|++.++|+++.
T Consensus 210 ~~~~~~~~~-------~~~~~~~~l~~~pl~h~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~l~~~~~t~~~~~P~~~~ 282 (545)
T PRK08162 210 NALSNILAW-------GMPKHPVYLWTLPMFHCNGWCFPWTVAARAGTNVCLRKVDPKLIFDLIREHGVTHYCGAPIVLS 282 (545)
T ss_pred HHHHHHHhc-------CCCCCCeeEeccCcHhhhhHHHHHHHHHHccEEEEeCCCCHHHHHHHHHHcCCeEEEechHHHH
Confidence 555444333 2367789999999999999855444455666666667789999999999999999999999999
Q ss_pred HHHhcccCCCCCCCCeeEEEecCCCCCHHHHHHHHHhCCCCceeccccccccCCccccccCCCC---------CCCCCcc
Q 011116 239 AFINSKLTDKYDLSSLQLLGCGGAPLGKEVTLKFKEKFPNVEIRQGYGLTETGGAGSRVIGPDE---------AERHGSV 309 (493)
Q Consensus 239 ~l~~~~~~~~~~l~~lr~v~~~Ge~~~~~~~~~~~~~~~~~~v~~~yG~tE~g~~~~~~~~~~~---------~~~~~~~ 309 (493)
.|++........+...+.++++|+.+++++.+.+++. ++++++.||+||+++.+..+..... .......
T Consensus 283 ~l~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~--~~~~~~~YG~tE~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 360 (545)
T PRK08162 283 ALINAPAEWRAGIDHPVHAMVAGAAPPAAVIAKMEEI--GFDLTHVYGLTETYGPATVCAWQPEWDALPLDERAQLKARQ 360 (545)
T ss_pred HHHhCccccccCCccceEEEECCCCCCHHHHHHHHHh--CCceeecccccccCcceeecccccccccCCccchhhccCCC
Confidence 9987654433345566778899999999999998874 8999999999998654443211110 0112345
Q ss_pred ccccC-CceEEEEcCCCCccCCC-C-CceEEEEeCccccccccCCcccccccccCCCeeeccceEEEcCCCcEEEEcccC
Q 011116 310 GRLAE-LMEAKIVDPATGEALPP-G-QKGELWLRGPTIMKGYVGDDKATSETVHSEGWLKTGDLCYFDSNGFLFIVDRLK 386 (493)
Q Consensus 310 g~p~~-~~~~~i~d~~~~~~~~~-g-~~Gel~v~~~~~~~gy~~~~~~~~~~~~~~~~~~TgD~~~~~~~g~~~~~GR~~ 386 (493)
|.+.+ +..++++|++++++++. | ..|||+++|+.++.||+++++.+...| .++||+|||+++++++|.+++.||.+
T Consensus 361 g~~~~~~~~~~i~d~~~~~~~~~~g~~~Gel~v~g~~~~~gY~~~~~~~~~~~-~~g~~~TGDl~~~d~dg~l~~~GR~~ 439 (545)
T PRK08162 361 GVRYPLQEGVTVLDPDTMQPVPADGETIGEIMFRGNIVMKGYLKNPKATEEAF-AGGWFHTGDLAVLHPDGYIKIKDRSK 439 (545)
T ss_pred CcccCCcceEEEEcCCCCcccCCCCCceeEEEEecCcchhhhcCChhhhHHHh-hCCCcccCceEEEcCCccEEEEeccc
Confidence 55554 34678889778888875 3 469999999999999999999998888 47899999999999999999999999
Q ss_pred CeEEeCceeeChHHHHHHHhcCCCcceEEEEeeeCCCCCeeEEEEEEeCCCCCCCHHHHHHHHHhcCCCCCCcceEEEec
Q 011116 387 ELIKYKAYQVPPVELEHLLHSNPEIADAAVIPYPDEEAGQIPMAFVVRKPGSNITEAEIMDFIAKQVAPYKKIRRVAFIN 466 (493)
Q Consensus 387 d~i~~~G~~i~~~~ie~~l~~~~~v~~~~v~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~l~~~l~~~~~p~~~~~~~ 466 (493)
|++|.+|.++++.+||..|.++|+|.++++++..++..++.+++++++.++...+.++++++++++++++++|..+.+ .
T Consensus 440 ~~i~~~G~~v~~~eIE~~l~~~~~v~~~~vv~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~~~l~~~~~P~~~~~-~ 518 (545)
T PRK08162 440 DIIISGGENISSIEVEDVLYRHPAVLVAAVVAKPDPKWGEVPCAFVELKDGASATEEEIIAHCREHLAGFKVPKAVVF-G 518 (545)
T ss_pred ceEEeCCEEECHHHHHHHHHhCCcccEEEEEeeeccccCceEEEEEEeCCCCCCCHHHHHHHHHHhcccccCCcEEEe-c
Confidence 999999999999999999999999999999999888778889999998877667889999999999999999998865 6
Q ss_pred cccCCCCCccchHHHHHHHhh
Q 011116 467 SIPKSTAGKILRRELVTHAIS 487 (493)
Q Consensus 467 ~lP~t~~GK~~r~~l~~~~~~ 487 (493)
++|+|++||++|+.|++++.+
T Consensus 519 ~iP~t~~gK~~r~~l~~~~~~ 539 (545)
T PRK08162 519 ELPKTSTGKIQKFVLREQAKS 539 (545)
T ss_pred ccCCCCCcCCcHHHHHHHHhh
Confidence 899999999999999988654
No 106
>COG1022 FAA1 Long-chain acyl-CoA synthetases (AMP-forming) [Lipid metabolism]
Probab=100.00 E-value=1.4e-58 Score=458.93 Aligned_cols=440 Identities=26% Similarity=0.389 Sum_probs=341.9
Q ss_pred HHHHHHhhCCCCCCCEEEEECCCCCCcHHHHHHHHHHcCCeeccCCCCCCHHHHHHHHhhcCCeEEEEcCCCcccCCC--
Q 011116 19 LSHALSKRDSLCRKTTSLTSSPLPPSTSPVLYFSLLSLGVVISPANPLSSTSEVSHQIQLSKPSIAFATSHTSYKLPS-- 96 (493)
Q Consensus 19 lA~~L~~~~gl~~gd~V~l~~~~~~~~~~~~~lA~~~~G~~~v~i~~~~~~~~l~~~l~~~~~~~il~~~~~~~~~~~-- 96 (493)
+|++| ...|++.||+|++++. |+++|+++.+||+.+|++.||+.+..+++++.++|+.+++++++++.........
T Consensus 58 ~a~gL-~~lg~~~gdrvai~a~-nr~eW~i~d~a~~~~g~v~Vp~y~t~~~~~~~~iL~~se~~~i~~e~~~~~~~~~~~ 135 (613)
T COG1022 58 LASGL-LSLGIPAGDRVAIFAA-NRPEWAIADLAILALGAVSVPIYSTSTPEQLAYILNESESKVIFVENQELLDLVLPV 135 (613)
T ss_pred HHHHH-HhcCCCCCCEEEEEeC-CCHHHHHHHHHHHHcCCeEEecCCCCCHHHHHHHHhcCCceEEEecchHHHHHHHhh
Confidence 49999 8899977999999999 9999999999999999999999999999999999999999999999743332111
Q ss_pred --CCcEE-Ee----c---------CchhhhhhccCc-----ccccccCCCCCCCCCCeEEEEccCCCCCCccceecchHH
Q 011116 97 --NLRTI-LM----D---------SPEFISLLNQNE-----DVADFANSNMTVYQSDPAAILYSSGTTGKVKGVLLSHLN 155 (493)
Q Consensus 97 --~~~~~-~~----~---------~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~i~~TSGTTG~pK~v~~t~~~ 155 (493)
....+ .. + ...+........ ..........+..++|+|.|+|||||||.||||+++|+|
T Consensus 136 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dDlatiiYTSGTTG~PKGVmLth~N 215 (613)
T COG1022 136 LEDCPKVVDLIVIIDLVREAVEAKALVLEVFPDEGISLFLIDSAGLEGRIAPPKPDDLATIIYTSGTTGTPKGVMLTHRN 215 (613)
T ss_pred hccccchhhhhhhhhhhhhccchhhccccccccccchhhhhcccccccccCCCCccceEEEEEcCCCCCCCceEEEehHH
Confidence 10000 00 0 000000000000 000111122467789999999999999999999999999
Q ss_pred HHHHHHHhhhhcccCCCCCCCCCCcEEEEecChhHHHHHHH-HHHHHhcCCeEEEecCCCHHHHHHHHHhcCeeecccCh
Q 011116 156 VIAIIAGYYHVTEETDPNEGPPPHPVSFFTLPMFHVFGFFM-LVRAASKGETLVFMERFDFEKMLKAVENYRVTYMPVSP 234 (493)
Q Consensus 156 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pl~~~~g~~~-~~~~l~~G~~~~~~~~~~~~~~~~~l~~~~~t~l~~~P 234 (493)
+.+++....+... -.+++|+.++.+|+.|++...+ ....+..|+++.... ++..++..+++++||+++++|
T Consensus 216 ~~~~v~~~~~~~~------~~~~~d~~LsfLPlaHi~Er~~~~~~~~~~g~~~~~~~--~~~~~~~dl~~~rPt~m~~VP 287 (613)
T COG1022 216 LLAQVAGIDEVLP------PIGPGDRVLSFLPLAHIFERAFEGGLALYGGVTVLFKE--DPRTLLEDLKEVRPTVMIGVP 287 (613)
T ss_pred HHHHHHHHHhhCC------CCCCCcEEEEeCcHHHHHHHHHHHHHHhhcceEEEecC--CHHHHHHHHHHhCCeEEeech
Confidence 9999999888873 1379999999999999999965 444455555444444 599999999999999999999
Q ss_pred HHHHHHHhcccC----CC-------------------------------------------CCC-CCeeEEEecCCCCCH
Q 011116 235 PLIVAFINSKLT----DK-------------------------------------------YDL-SSLQLLGCGGAPLGK 266 (493)
Q Consensus 235 ~~~~~l~~~~~~----~~-------------------------------------------~~l-~~lr~v~~~Ge~~~~ 266 (493)
.+++.+.+.... .. ..+ ..+|.+++||+++++
T Consensus 288 RvwE~i~~~I~~kv~~~~~~~~~if~~a~~~~~~~~~~~~~~~~~~~~~~~~d~LVf~Kir~~lGgri~~~~sGGa~l~~ 367 (613)
T COG1022 288 RVWEKVYKGIMEKVAKAPAVRRKLFRWALKVAYKKISRALLGGGPLSWLLVADRLVFRKIRDALGGRIRYALSGGAPLSP 367 (613)
T ss_pred HHHHHHHHHHHHHHHhcchhHHHHHHHHHHHHHHHHHhhhcccCCcchhhhhhHHHHHHHHHHhCCcEEEEEecCCcCCH
Confidence 998776442210 00 001 378999999999999
Q ss_pred HHHHHHHHhCCCCceeccccccccCCccccccCCCCCCCCCccccccCCceEEEEcCCCCccCCCCCceEEEEeCccccc
Q 011116 267 EVTLKFKEKFPNVEIRQGYGLTETGGAGSRVIGPDEAERHGSVGRLAELMEAKIVDPATGEALPPGQKGELWLRGPTIMK 346 (493)
Q Consensus 267 ~~~~~~~~~~~~~~v~~~yG~tE~g~~~~~~~~~~~~~~~~~~g~p~~~~~~~i~d~~~~~~~~~g~~Gel~v~~~~~~~ 346 (493)
++..+++.. ++++.+.||+||+++.++. .++.....+++|.|+|+++++|.| + |||+|+||.+++
T Consensus 368 ~~~~f~~~l--Gi~i~eGYGlTEts~~~~v--~~~~~~~~gtvG~p~p~~evKI~d-~----------GEilVRG~~Vm~ 432 (613)
T COG1022 368 ELLHFFRSL--GIPILEGYGLTETSAVVSV--NPPDRFVLGTVGKPLPGIEVKIAD-D----------GEILVRGPNVMK 432 (613)
T ss_pred HHHHHHHHc--CCCeEEEecccccccceEE--ccccCcccCCcCCcCCCceEEEcc-C----------ceEEEecchhcc
Confidence 999999998 8999999999999988776 444566889999999999999999 3 999999999999
Q ss_pred cccCCcccccccccCCCeeeccceEEEcCCCcEEEEcccCCeEEe-CceeeChHHHHHHHhcCCCcceEEEEeeeCCCCC
Q 011116 347 GYVGDDKATSETVHSEGWLKTGDLCYFDSNGFLFIVDRLKELIKY-KAYQVPPVELEHLLHSNPEIADAAVIPYPDEEAG 425 (493)
Q Consensus 347 gy~~~~~~~~~~~~~~~~~~TgD~~~~~~~g~~~~~GR~~d~i~~-~G~~i~~~~ie~~l~~~~~v~~~~v~~~~~~~~~ 425 (493)
|||++|+.|.+.|+.||||+|||+|.++++|++.+.||.+|+||+ +|++|.|+.||+.+.++|-|.+.+|++.. .
T Consensus 433 GYyk~pe~Taeaf~~DGWf~TGDlg~~d~~g~L~i~gRkK~~i~l~~GknIaP~~IE~~l~~~~~I~qi~vvg~~----k 508 (613)
T COG1022 433 GYYKNPEATAEAFTEDGWFRTGDLGELDEDGYLVITGRKKELIKLSNGKNIAPEPIESKLAKSPLIEQICVVGDD----K 508 (613)
T ss_pred hhcCChHHHhhhccccCCcccCceeEEcCCCcEEEeecccceEECCCCcccChHHHHHHHhcCCCeeEEEEEecC----C
Confidence 999999999999999999999999999999999999999999999 89999999999999999999999999832 2
Q ss_pred eeEEEEEEeCCCCC------------CCH------HHHHHHHH-------hcCCCCCCcceEEEe-ccc-----cCCCCC
Q 011116 426 QIPMAFVVRKPGSN------------ITE------AEIMDFIA-------KQVAPYKKIRRVAFI-NSI-----PKSTAG 474 (493)
Q Consensus 426 ~~~~~~v~~~~~~~------------~~~------~~l~~~l~-------~~l~~~~~p~~~~~~-~~l-----P~t~~G 474 (493)
..+.+++++....- .+. .++++... +....+..+.++... .++ -.|++-
T Consensus 509 ~~~~AlIvp~~~~l~~~a~~~~~~~~~~~~~l~~~~~l~~~~~~~i~~~~~~~~~~E~i~~~~~~~~~~t~~~~~~t~t~ 588 (613)
T COG1022 509 KFLVALIVPDFDALEKWAESLNKVISASREELARDPKLLKLILPRVNKGNKRLFGFEQIKKFVLLPKEFTPENGELTPTL 588 (613)
T ss_pred cceEEEEeCCHHHHHHHHHhccccccCCHHHHhhCHHHHHHHHHHHHHHhhcccchhhhheeeecccccccccCccccch
Confidence 35778888754310 011 12222221 124455666666554 233 357889
Q ss_pred ccchHHHHHHHhh
Q 011116 475 KILRRELVTHAIS 487 (493)
Q Consensus 475 K~~r~~l~~~~~~ 487 (493)
|+.|..+.+.+.+
T Consensus 589 klkR~~i~~~~~~ 601 (613)
T COG1022 589 KLKRHVILDRYKD 601 (613)
T ss_pred hhhHHHHHHhhhh
Confidence 9999988877654
No 107
>PRK09029 O-succinylbenzoic acid--CoA ligase; Provisional
Probab=100.00 E-value=4.5e-57 Score=455.19 Aligned_cols=416 Identities=22% Similarity=0.321 Sum_probs=354.2
Q ss_pred hHHHHHHhhCCCCCCCEEEEECCCCCCcHHHHHHHHHHcCCeeccCCCCCCHHHHHHHHhhcCCeEEEEcCCCcccCCCC
Q 011116 18 TLSHALSKRDSLCRKTTSLTSSPLPPSTSPVLYFSLLSLGVVISPANPLSSTSEVSHQIQLSKPSIAFATSHTSYKLPSN 97 (493)
Q Consensus 18 ~lA~~L~~~~gl~~gd~V~l~~~~~~~~~~~~~lA~~~~G~~~v~i~~~~~~~~l~~~l~~~~~~~il~~~~~~~~~~~~ 97 (493)
++|.+| .+.|+++||+|+++++ |+++++++++||+++|++++|+++..+.+++..+++.+++++++++++... +. .
T Consensus 40 ~~a~~L-~~~g~~~~~~v~l~~~-~~~~~~~~~la~~~~G~~~v~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~-~~-~ 115 (458)
T PRK09029 40 QLAAGF-AQQGVVEGSGVALRGK-NSPETLLAYLALLQCGARVLPLNPQLPQPLLEELLPSLTLDFALVLEGENT-FS-A 115 (458)
T ss_pred HHHHHH-HHcCCCCCCEEEEecC-CCHHHHHHHHHHHHcCCEEeecCCCCCHHHHHHHHHhcCCCEEEEcCcccc-hh-h
Confidence 349999 7789999999999999 999999999999999999999999999999999999999999999876432 11 0
Q ss_pred CcEEEecCchhhhhhccCcccccccCCCCCCCCCCeEEEEccCCCCCCccceecchHHHHHHHHHhhhhcccCCCCCCCC
Q 011116 98 LRTILMDSPEFISLLNQNEDVADFANSNMTVYQSDPAAILYSSGTTGKVKGVLLSHLNVIAIIAGYYHVTEETDPNEGPP 177 (493)
Q Consensus 98 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~TSGTTG~pK~v~~t~~~~~~~~~~~~~~~~~~~~~~~~~ 177 (493)
. ...... ... ........++++++++|||||||.||+|.++|+++..........+. ..
T Consensus 116 ~-----~~~~~~---~~~------~~~~~~~~~~~~a~i~~TSGTTG~PKgv~~s~~~~~~~~~~~~~~~~-------~~ 174 (458)
T PRK09029 116 L-----TSLHLQ---LVE------GAHAVAWQPQRLATMTLTSGSTGLPKAAVHTAQAHLASAEGVLSLMP-------FT 174 (458)
T ss_pred c-----cccccc---ccc------ccCcccCCCCCeEEEEECCCCCCCCCEEEEeHHHHHHHHHHHhhcCC-------CC
Confidence 0 000000 000 11123456789999999999999999999999999988887766653 47
Q ss_pred CCcEEEEecChhHHHHHHHHHHHHhcCCeEEEecCCCHHHHHHHHHhcCeeecccChHHHHHHHhcccCCCCCCCCeeEE
Q 011116 178 PHPVSFFTLPMFHVFGFFMLVRAASKGETLVFMERFDFEKMLKAVENYRVTYMPVSPPLIVAFINSKLTDKYDLSSLQLL 257 (493)
Q Consensus 178 ~~~~~~~~~pl~~~~g~~~~~~~l~~G~~~~~~~~~~~~~~~~~l~~~~~t~l~~~P~~~~~l~~~~~~~~~~l~~lr~v 257 (493)
++++++...|++|.+++..++.++..|+++++.+. ..+++.+. +++.+..+|+++..++..... ..++|.+
T Consensus 175 ~~~~~l~~~p~~h~~g~~~~~~~l~~G~~v~~~~~---~~~~~~i~--~~t~~~~~P~~~~~l~~~~~~----~~~l~~i 245 (458)
T PRK09029 175 AQDSWLLSLPLFHVSGQGIVWRWLYAGATLVVRDK---QPLEQALA--GCTHASLVPTQLWRLLDNRSE----PLSLKAV 245 (458)
T ss_pred ccceEEEecCcHhhhhhHHHHHHHhCCceEEeCCh---HHHHHHHh--hceeeecChHHHHHHHhcccc----CCcceEE
Confidence 88999999999999998777888999999998764 55667664 789999999999998876432 3479999
Q ss_pred EecCCCCCHHHHHHHHHhCCCCceeccccccccCCccccccCCCCCCCCCccccccCCceEEEEcCCCCccCCCCCceEE
Q 011116 258 GCGGAPLGKEVTLKFKEKFPNVEIRQGYGLTETGGAGSRVIGPDEAERHGSVGRLAELMEAKIVDPATGEALPPGQKGEL 337 (493)
Q Consensus 258 ~~~Ge~~~~~~~~~~~~~~~~~~v~~~yG~tE~g~~~~~~~~~~~~~~~~~~g~p~~~~~~~i~d~~~~~~~~~g~~Gel 337 (493)
++||+++++.+.+++.+. ++++++.||+||++...+.. . .....++|+|.+++.+++++ |||
T Consensus 246 ~~gG~~~~~~~~~~~~~~--g~~~~~~YG~tE~~~~~~~~-~---~~~~~~~G~~~~~~~~~i~~------------gel 307 (458)
T PRK09029 246 LLGGAAIPVELTEQAEQQ--GIRCWCGYGLTEMASTVCAK-R---ADGLAGVGSPLPGREVKLVD------------GEI 307 (458)
T ss_pred EECCCCCCHHHHHHHHHc--CCcEeccccccccCcceecc-C---CCCCCCCCCCCCCCEEEEeC------------CEE
Confidence 999999999999998864 89999999999998654431 1 12235699999999999987 899
Q ss_pred EEeCccccccccCCcccccccccCCCeeeccceEEEcCCCcEEEEcccCCeEEeCceeeChHHHHHHHhcCCCcceEEEE
Q 011116 338 WLRGPTIMKGYVGDDKATSETVHSEGWLKTGDLCYFDSNGFLFIVDRLKELIKYKAYQVPPVELEHLLHSNPEIADAAVI 417 (493)
Q Consensus 338 ~v~~~~~~~gy~~~~~~~~~~~~~~~~~~TgD~~~~~~~g~~~~~GR~~d~i~~~G~~i~~~~ie~~l~~~~~v~~~~v~ 417 (493)
+++|+.++.||+++++.+.... .++||+|||+++++ ||.+++.||.+|+||.+|.+|+|.+||++|.++|+|.+++|+
T Consensus 308 ~v~g~~~~~gY~~~~~~~~~~~-~~~~~~TGD~~~~~-~g~l~~~gR~~d~i~~~G~~v~p~eiE~~l~~~~~v~~~~v~ 385 (458)
T PRK09029 308 WLRGASLALGYWRQGQLVPLVN-DEGWFATRDRGEWQ-NGELTILGRLDNLFFSGGEGIQPEEIERVINQHPLVQQVFVV 385 (458)
T ss_pred EEecCceeeeeecCcccccccc-CCCccCCCCcEEEe-CCEEEEecccccceeeCCEEeCHHHHHHHHhcCCCcceEEEE
Confidence 9999999999999887775443 57999999999999 999999999999999999999999999999999999999999
Q ss_pred eeeCCCCCeeEEEEEEeCCCCCCCHHHHHHHHHhcCCCCCCcceEEEeccccCCCCCccchHHHHHHHhhCC
Q 011116 418 PYPDEEAGQIPMAFVVRKPGSNITEAEIMDFIAKQVAPYKKIRRVAFINSIPKSTAGKILRRELVTHAISGN 489 (493)
Q Consensus 418 ~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~l~~~l~~~~~p~~~~~~~~lP~t~~GK~~r~~l~~~~~~~~ 489 (493)
+.+++..++.+++++++.. ..+.+++++++++++++|++|..+.+++++|+|.+||++|+.|++++.++.
T Consensus 386 ~~~~~~~~~~~~a~v~~~~--~~~~~~l~~~~~~~l~~~~~P~~~~~~~~~p~t~~gKi~r~~L~~~~~~~~ 455 (458)
T PRK09029 386 PVADAEFGQRPVAVVESDS--EAAVVNLAEWLQDKLARFQQPVAYYLLPPELKNGGIKISRQALKEWVAQQL 455 (458)
T ss_pred ccCCcccCceEEEEEEcCc--ccCHHHHHHHHHhhchhccCCeEEEEecccccCcCCCcCHHHHHHHHHhcc
Confidence 9999888888999988763 467789999999999999999999999999999999999999999998754
No 108
>KOG1256 consensus Long-chain acyl-CoA synthetases (AMP-forming) [Lipid transport and metabolism]
Probab=100.00 E-value=7.6e-58 Score=446.63 Aligned_cols=457 Identities=24% Similarity=0.352 Sum_probs=363.2
Q ss_pred HHHHHHhhCCCCCCCEEEEECCCCCCcHHHHHHHHHHcCCeeccCCCCCCHHHHHHHHhhcCCeEEEEcC-CCcccCCC-
Q 011116 19 LSHALSKRDSLCRKTTSLTSSPLPPSTSPVLYFSLLSLGVVISPANPLSSTSEVSHQIQLSKPSIAFATS-HTSYKLPS- 96 (493)
Q Consensus 19 lA~~L~~~~gl~~gd~V~l~~~~~~~~~~~~~lA~~~~G~~~v~i~~~~~~~~l~~~l~~~~~~~il~~~-~~~~~~~~- 96 (493)
+|..| .++|+++++.|+|+.. |+++|+++..||...|.++||+...+++++++++++.+++.+++++. .....+.+
T Consensus 121 ~~~~l-~~lG~~~~~~VGIy~~-N~pEWiis~~a~~~~~~v~VplYdTlg~ea~~~Ii~~~e~~iv~vd~~~k~~~ll~~ 198 (691)
T KOG1256|consen 121 LGSGL-RKLGVKEDSKVGIYAF-NRPEWIISEMACYAYSLVNVPLYDTLGAEAVHYIINHAEISIVFVDNAKKAEKLLEI 198 (691)
T ss_pred HHHHH-HHhCCCCCceEEEecc-CChhhHHhHHHHHhcCCEEeecccCCCHHHHHHHHHhcceeEEEEeCHHHHHHHHhh
Confidence 49999 6899999999999999 99999999999999999999999999999999999999999999994 33332221
Q ss_pred -------CCc-EEEecCc----------------hhhhhhccCcccccccCCC-CCCCCCCeEEEEccCCCCCCccceec
Q 011116 97 -------NLR-TILMDSP----------------EFISLLNQNEDVADFANSN-MTVYQSDPAAILYSSGTTGKVKGVLL 151 (493)
Q Consensus 97 -------~~~-~~~~~~~----------------~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~i~~TSGTTG~pK~v~~ 151 (493)
.++ ++.++.. +|.++..-... ..... .+..++|.|.|+|||||||.||||++
T Consensus 199 ~~~~~~~~LK~iI~~~~~~~~~~~~~~~~gv~v~S~~e~~~lG~~---~~~~~~~~p~p~d~atI~yTSGTTG~PKGVML 275 (691)
T KOG1256|consen 199 KENDSLPSLKAIIQLDEPSDELKEKAENNGVEVYSWDEFEELGKK---NQRKPRVPPKPDDLATICYTSGTTGNPKGVML 275 (691)
T ss_pred cccccCccceeEEEecCCchhhhhhhhcCCeEEEEHHHHHhhccc---ccCCCCCCCCccceEEEEEcCCCCCCCceEEE
Confidence 233 3333322 25555544421 11222 57789999999999999999999999
Q ss_pred chHHHHHHHHHhhhhcccCCCCCCCCCCcEEEEecChhHHHHHHHHHHHHhcCCeEEEecCCCHHHHHHHHHhcCeeecc
Q 011116 152 SHLNVIAIIAGYYHVTEETDPNEGPPPHPVSFFTLPMFHVFGFFMLVRAASKGETLVFMERFDFEKMLKAVENYRVTYMP 231 (493)
Q Consensus 152 t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pl~~~~g~~~~~~~l~~G~~~~~~~~~~~~~~~~~l~~~~~t~l~ 231 (493)
||+|+...++........ .........|.+++.+||.|++........+..|+++.+..+ |+..+.+.+++.+||.+.
T Consensus 276 TH~Niv~~v~~~~~~~~~-~~~~~~~~~dv~lSyLPLAHi~er~~~~~~~~~G~~IgF~~g-D~~~l~~dlk~lkPT~f~ 353 (691)
T KOG1256|consen 276 THRNIVSDVAGIFFLSAA-ENAKATVGDDVYLSYLPLAHIFERVVELYTFYIGAKIGFARG-DILKLTDDLKELKPTVFP 353 (691)
T ss_pred eccceeehhhhhhhhhhc-ccccccccCceEEEeCcHHHHHHHHHHHhHhhcccEEEEecC-ChHHHHHHHHHhCCcEEe
Confidence 999998865532222111 111123457999999999999999777777799999999874 788888889999999999
Q ss_pred cChHHHHHHHhcccC----C----------------------CCC-------------------CCCeeEEEecCCCCCH
Q 011116 232 VSPPLIVAFINSKLT----D----------------------KYD-------------------LSSLQLLGCGGAPLGK 266 (493)
Q Consensus 232 ~~P~~~~~l~~~~~~----~----------------------~~~-------------------l~~lr~v~~~Ge~~~~ 266 (493)
++|.++.++.+.... . +.. -..+|.+++|++|+++
T Consensus 354 ~VPRVl~riye~I~~~~~~sgflkr~l~~~A~~~k~~~~~~~G~~~~~~~~~D~lVf~KI~~~LGg~vr~~~sGaAPls~ 433 (691)
T KOG1256|consen 354 GVPRVLERIYEGIQKQVQKSGFLKRKLFNFAMAYKLEHRLMKGKSRSRDRFADKLVFHKIKQSLGGNVRLIISGAAPLSP 433 (691)
T ss_pred ccHhHHHHHHHHHHHHHhcchHHHHHHHHHHHHHHHHHHhhCCCCcccchHHHHHHHHHHHHHhcCceeEEEecCCCCCH
Confidence 999998776543220 0 000 1478999999999999
Q ss_pred HHHHHHHHhCCCCceeccccccccCCccccccCCCCCCCCCccccccCCceEEEEcCCCCccCCCCCceEEEEeCccccc
Q 011116 267 EVTLKFKEKFPNVEIRQGYGLTETGGAGSRVIGPDEAERHGSVGRLAELMEAKIVDPATGEALPPGQKGELWLRGPTIMK 346 (493)
Q Consensus 267 ~~~~~~~~~~~~~~v~~~yG~tE~g~~~~~~~~~~~~~~~~~~g~p~~~~~~~i~d~~~~~~~~~g~~Gel~v~~~~~~~ 346 (493)
++...++..+ +++|++.||+||+++..+. ..+.+ ...+++|.|+|+.+++++|.++.+.-+.+..||||++|+.++.
T Consensus 434 ev~~F~r~~~-g~~v~eGYGlTEts~g~~~-~~~~d-~~lgsvG~p~p~~~vKL~dvpe~ny~a~~~~GEIcirG~~Vf~ 510 (691)
T KOG1256|consen 434 EVLTFFRAAL-GCRVLEGYGLTETSAGTTL-TLPGD-NVLGSVGPPVPGNEVKLVDVPEMNYDADGSKGEICVRGPNVFM 510 (691)
T ss_pred HHHHHHHHhc-CceeeecccccccCCceEe-ccCCC-CCCCCcCCcccCceEEEechHHhCcCcCCCcceEEEecchhce
Confidence 9999999998 8999999999999865554 22323 3789999999999999999888888888889999999999999
Q ss_pred cccCCcccccccccCCCeeeccceEEEcCCCcEEEEcccCCeEEe-CceeeChHHHHHHHhcCCCcceEEEEeeeCCCCC
Q 011116 347 GYVGDDKATSETVHSEGWLKTGDLCYFDSNGFLFIVDRLKELIKY-KAYQVPPVELEHLLHSNPEIADAAVIPYPDEEAG 425 (493)
Q Consensus 347 gy~~~~~~~~~~~~~~~~~~TgD~~~~~~~g~~~~~GR~~d~i~~-~G~~i~~~~ie~~l~~~~~v~~~~v~~~~~~~~~ 425 (493)
||+++|+.|.+.++.+||++|||+|+|+++|.+.+.||.+++||+ +|++|.|+.||++..+.+-|.+.+|.+... .
T Consensus 511 GYyK~p~~T~e~ideDGWLhTGDiG~~~p~G~l~IidRkK~ifklaqGEyVaPe~IEniy~~~~~V~qi~V~g~s~---~ 587 (691)
T KOG1256|consen 511 GYYKDPEKTAEAIDEDGWLHTGDIGEWDPNGTLKIIDRKKNIFKLAQGEYVAPEKIENIYKRSLPVQQIFVLGDSL---R 587 (691)
T ss_pred eccCChHHHhhhhccccccccccceeECCCccEEEEecccceEEcCCCCccChHHHHHHHhcCCceEEEEEECCcc---h
Confidence 999999999999999999999999999999999999999999999 899999999999999999999988887533 3
Q ss_pred eeEEEEEEeCCCCCCCH--------------------HHHHHHHHh-----cCCCCCCcceEEEe------ccccCCCCC
Q 011116 426 QIPMAFVVRKPGSNITE--------------------AEIMDFIAK-----QVAPYKKIRRVAFI------NSIPKSTAG 474 (493)
Q Consensus 426 ~~~~~~v~~~~~~~~~~--------------------~~l~~~l~~-----~l~~~~~p~~~~~~------~~lP~t~~G 474 (493)
..++++|++.+...... +.+..++.+ .+..+.....|.+. +.=-.|+|-
T Consensus 588 ~~LvaiVvpd~e~~~~~a~~~~~~~~~eelc~n~~~k~~vl~el~~~~~~~~l~~fe~vk~v~l~~~~FsienglltPTl 667 (691)
T KOG1256|consen 588 SFLVAIVVPDPEVLKSWAAKDGVKGTFEELCRNLDVKEAVLSELVKVGKENGLKGFEQVKKVHLLPDPFSIENGLLTPTL 667 (691)
T ss_pred hcEEEEEecChhhchhhHHHccCchhHHHHhcChhhHHHHHHHHHHHHhhhhccChhhEeeEEEecccccccCCccchhh
Confidence 47899999865421110 122222222 36667777777763 333468899
Q ss_pred ccchHHHHHHHhhC
Q 011116 475 KILRRELVTHAISG 488 (493)
Q Consensus 475 K~~r~~l~~~~~~~ 488 (493)
|+.|..|++++.++
T Consensus 668 K~KR~~l~~~yk~~ 681 (691)
T KOG1256|consen 668 KIKRPQLLKYYKKQ 681 (691)
T ss_pred hhhhHHHHHHHHHH
Confidence 99999999998764
No 109
>PRK07868 acyl-CoA synthetase; Validated
Probab=100.00 E-value=3.8e-57 Score=489.10 Aligned_cols=445 Identities=16% Similarity=0.170 Sum_probs=345.1
Q ss_pred chhhhHHHHHHhhCCCCCCCEEEEECCCCCCcHHHHHHHHHHcCCeeccCCCCCCHHHHHHHHhhcCCeEEEEcCCCccc
Q 011116 14 SARFTLSHALSKRDSLCRKTTSLTSSPLPPSTSPVLYFSLLSLGVVISPANPLSSTSEVSHQIQLSKPSIAFATSHTSYK 93 (493)
Q Consensus 14 ~~~~~lA~~L~~~~gl~~gd~V~l~~~~~~~~~~~~~lA~~~~G~~~v~i~~~~~~~~l~~~l~~~~~~~il~~~~~~~~ 93 (493)
+++ +|++| .+.|+++||+|+++++ |+++++++++||+++|++++|++|. +++.++++.++++++|++++....
T Consensus 482 a~r--lA~~L-~~~Gv~~Gd~VaI~~~-n~~e~v~a~lA~~~aGav~vpl~p~---~~l~~il~~s~~~~li~~~~~~~~ 554 (994)
T PRK07868 482 INN--VVRGL-IAVGVRQGDRVGVLME-TRPSALVAIAALSRLGAVAVLMPPD---TDLAAAVRLGGVTEIITDPTNLEA 554 (994)
T ss_pred HHH--HHHHH-HHcCCCCCCEEEEEcC-CCHHHHHHHHHHHhcCCEEEEeCCc---hhHHHHHhccCCeEEEEChHHHHH
Confidence 444 49999 8889999999999999 9999999999999999999999985 578999999999999998765544
Q ss_pred CCC-CCcEEEecCch--------hhhhhccCcccccc-c----CCCCCCCCCCeEEEEccCCCCCCccceecchHHHHHH
Q 011116 94 LPS-NLRTILMDSPE--------FISLLNQNEDVADF-A----NSNMTVYQSDPAAILYSSGTTGKVKGVLLSHLNVIAI 159 (493)
Q Consensus 94 ~~~-~~~~~~~~~~~--------~~~~~~~~~~~~~~-~----~~~~~~~~~~~~~i~~TSGTTG~pK~v~~t~~~~~~~ 159 (493)
+.+ ..+++.++..+ .............. . .......++++++|+|| ||||.||++.++|.++...
T Consensus 555 ~~~~~~~iiv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dd~a~IiyT-gStgtpKpk~vt~~~~~~~ 633 (994)
T PRK07868 555 ARQLPGRVLVLGGGESRDLDLPDDADVIDMEKIDPDAVELPGWYRPNPGLARDLAFIAFS-TAGGELVAKQITNYRWALS 633 (994)
T ss_pred HHhcCceEEEecCCccccccCCcchhhhhhhhcCcccccCCcccCCCCCCCCccEEEEEe-CCCCCcCcEEEehHHHHHH
Confidence 322 22334333210 00000000000000 0 00112235889999998 5777788887888776544
Q ss_pred HHHhhhhcccCCCCCCCCCCcEEEEecChhHHHHHHHHH-HHHhcCCeEEEecCCCHHHHHHHHHhcCeeecccChHHHH
Q 011116 160 IAGYYHVTEETDPNEGPPPHPVSFFTLPMFHVFGFFMLV-RAASKGETLVFMERFDFEKMLKAVENYRVTYMPVSPPLIV 238 (493)
Q Consensus 160 ~~~~~~~~~~~~~~~~~~~~~~~~~~~pl~~~~g~~~~~-~~l~~G~~~~~~~~~~~~~~~~~l~~~~~t~l~~~P~~~~ 238 (493)
.......+ ++.++|++++.+|++|..++...+ .++..|+++++.+.++++.+++.++++++|++.++|+++.
T Consensus 634 ~~~~~~~~-------~l~~~d~~L~~~Pl~h~~gl~~~l~~~l~gG~~vvl~~~~~~~~~~~~I~~~~vT~~~~~Ps~l~ 706 (994)
T PRK07868 634 AFGTASAA-------ALDRRDTVYCLTPLHHESGLLVSLGGAVVGGSRIALSRGLDPDRFVQEVRQYGVTVVSYTWAMLR 706 (994)
T ss_pred HHhhhhhc-------CCCCCCeEEEecChHHHhHHHHHHHHHhccceEEEecCCCCHHHHHHHHHHhCCcEEEeHHHHHH
Confidence 43333333 347899999999999999996544 4555555666667789999999999999999999999999
Q ss_pred HHHhcccCCCCCCCCeeEEEecCCCCCHHHHHHHHHhCCCCceeccccccccCCccccccCCCCCCCCCccccccCCc-e
Q 011116 239 AFINSKLTDKYDLSSLQLLGCGGAPLGKEVTLKFKEKFPNVEIRQGYGLTETGGAGSRVIGPDEAERHGSVGRLAELM-E 317 (493)
Q Consensus 239 ~l~~~~~~~~~~l~~lr~v~~~Ge~~~~~~~~~~~~~~~~~~v~~~yG~tE~g~~~~~~~~~~~~~~~~~~g~p~~~~-~ 317 (493)
.|++........++++|.++ |+.+++++.+++.+.|+++.+++.||+||++..... . .....+++|+|++++ +
T Consensus 707 ~L~~~~~~~~~~~~slr~~~--g~gl~~~l~~~~~~~~~~~~l~~~YG~TE~~~~~~~---~-~~~~~~svG~p~pg~~~ 780 (994)
T PRK07868 707 EVVDDPAFVLHGNHPVRLFI--GSGMPTGLWERVVEAFAPAHVVEFFATTDGQAVLAN---V-SGAKIGSKGRPLPGAGR 780 (994)
T ss_pred HHHhCcCCccCCCCceEEEe--cCCCCHHHHHHHHHHhCchheeeeeecccccccccc---c-CCCCCcccCCccCCCCc
Confidence 99886544445577899876 445999999999999977899999999998754332 1 123567899999997 6
Q ss_pred EEEE--cC--------CCC--ccCCCCCceEEEEeCccccccccCCcccc--ccccc-CCCeeeccceEEEcCCCcEEEE
Q 011116 318 AKIV--DP--------ATG--EALPPGQKGELWLRGPTIMKGYVGDDKAT--SETVH-SEGWLKTGDLCYFDSNGFLFIV 382 (493)
Q Consensus 318 ~~i~--d~--------~~~--~~~~~g~~Gel~v~~~~~~~gy~~~~~~~--~~~~~-~~~~~~TgD~~~~~~~g~~~~~ 382 (493)
++|. |+ +++ +.++.|+.|||+++++.. . +++.+ ...|. .+|||+|||+|++|+||+++|.
T Consensus 781 v~i~~~d~~~g~li~d~~G~~~~~~~ge~Gel~~~~~~~----~-~p~~t~~~~~~~~~dgw~~TGDlg~~d~dG~l~~~ 855 (994)
T PRK07868 781 VELAAYDPEHDLILEDDRGFVRRAEVNEVGVLLARARGP----I-DPTASVKRGVFAPADTWISTEYLFRRDDDGDYWLV 855 (994)
T ss_pred eeEEEecCcCCceeecCCceEEEcCCCCceEEEEecCCC----C-ChhhhhHhcccccCCEEEeccceEEEcCCCCEEEe
Confidence 6653 21 344 557889999999998753 2 23322 22232 4799999999999999999999
Q ss_pred cccCCeEEeCceeeChHHHHHHHhcCCCcceEEEEeeeCCCCCeeEEEEEEeCCCCCCCHHHHHHHHHhcCCCCCCcceE
Q 011116 383 DRLKELIKYKAYQVPPVELEHLLHSNPEIADAAVIPYPDEEAGQIPMAFVVRKPGSNITEAEIMDFIAKQVAPYKKIRRV 462 (493)
Q Consensus 383 GR~~d~i~~~G~~i~~~~ie~~l~~~~~v~~~~v~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~l~~~l~~~~~p~~~ 462 (493)
||.||+||++|.+|+|.|||++|.+||.|.+++|++.+++. ++.++++|++.++...+.++|++++++ ++.|++|+.|
T Consensus 856 GR~dd~Ik~~G~~I~p~EIE~~L~~hp~V~~aaVvg~~d~~-~~~~~a~Vv~~~~~~~~~~~L~~~l~~-l~~y~vP~~i 933 (994)
T PRK07868 856 DRRGSVIRTARGPVYTEPVTDALGRIGGVDLAVTYGVEVGG-RQLAVAAVTLRPGAAITAADLTEALAS-LPVGLGPDIV 933 (994)
T ss_pred ccCCCEEEeCCceEcHHHHHHHHhcCCCeeEEEEEeecCCC-CceEEEEEEeCCCCcCCHHHHHHHHHh-CCCCcCCeEE
Confidence 99999999988899999999999999999999999998774 678899999888777888999999986 9999999999
Q ss_pred EEeccccCCCCCccchHHHHHHHh
Q 011116 463 AFINSIPKSTAGKILRRELVTHAI 486 (493)
Q Consensus 463 ~~~~~lP~t~~GK~~r~~l~~~~~ 486 (493)
+++++||+|++||++|++|++...
T Consensus 934 ~~v~~lP~T~sGKi~r~~L~~~~l 957 (994)
T PRK07868 934 HVVPEIPLSATYRPTVSALRAAGI 957 (994)
T ss_pred EEeCCCCCCccccEehHHHHhcCC
Confidence 999999999999999999987754
No 110
>PRK09192 acyl-CoA synthetase; Validated
Probab=100.00 E-value=1.5e-57 Score=471.34 Aligned_cols=455 Identities=21% Similarity=0.288 Sum_probs=361.6
Q ss_pred hHHHHHHhhCCCCCCCEEEEECCCCCCcHHHHHHHHHHcCCeeccCCCCCC-------HHHHHHHHhhcCCeEEEEcCCC
Q 011116 18 TLSHALSKRDSLCRKTTSLTSSPLPPSTSPVLYFSLLSLGVVISPANPLSS-------TSEVSHQIQLSKPSIAFATSHT 90 (493)
Q Consensus 18 ~lA~~L~~~~gl~~gd~V~l~~~~~~~~~~~~~lA~~~~G~~~v~i~~~~~-------~~~l~~~l~~~~~~~il~~~~~ 90 (493)
++|.+| .+.|+++||+|+++++ |+++++++++||+++|++++|+++..+ .+++.++++.++++++++++..
T Consensus 61 ~~a~~L-~~~gi~~gd~V~l~~~-n~~~~~~~~lA~~~~G~~~v~i~~~~~~~~~~~~~~~l~~~i~~~~~~~il~~~~~ 138 (579)
T PRK09192 61 AGARRL-LALGLKPGDRVALIAE-TDGDFVEAFFACQYAGLVPVPLPLPMGFGGRESYIAQLRGMLASAQPAAIITPDEL 138 (579)
T ss_pred HHHHHH-HHhCCCCCCEEEEEcC-CchhHHHHHHHHHHcCCeeEeccCCcccccchHHHHHHHHHHHhcCCCEEEeChHH
Confidence 359999 7789999999999999 999999999999999999999976543 6899999999999999998765
Q ss_pred cccCCC---CCcEEEecCchhhhhhccCcccccccCCCCCCCCCCeEEEEccCCCCCCccceecchHHHHHHHHHhhh-h
Q 011116 91 SYKLPS---NLRTILMDSPEFISLLNQNEDVADFANSNMTVYQSDPAAILYSSGTTGKVKGVLLSHLNVIAIIAGYYH-V 166 (493)
Q Consensus 91 ~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~TSGTTG~pK~v~~t~~~~~~~~~~~~~-~ 166 (493)
.+.+.+ ....+.+ ..+..+..... . ........++++++++|||||||.||+|.++|.++...+..... .
T Consensus 139 ~~~~~~~~~~~~~~~~--~~~~~~~~~~~---~-~~~~~~~~~~~~a~i~~TSGTTG~PKgv~~sh~~~~~~~~~~~~~~ 212 (579)
T PRK09192 139 LPWVNEATHGNPLLHV--LSHAWFKALPE---A-DVALPRPTPDDIAYLQYSSGSTRFPRGVIITHRALMANLRAISHDG 212 (579)
T ss_pred HHHHHHhhccccccce--eehhhhcccCC---C-ccccCCCCCCCeEEEEecCCCCCCCceEEeeHHHHHHHHHHHHhhc
Confidence 443322 1111111 11222222111 1 11112345689999999999999999999999999988776665 4
Q ss_pred cccCCCCCCCCCCcEEEEecChhHHHHHH-HHHHHHhcCCeEEEecC----CCHHHHHHHHHhcCeeecccChHHHHHHH
Q 011116 167 TEETDPNEGPPPHPVSFFTLPMFHVFGFF-MLVRAASKGETLVFMER----FDFEKMLKAVENYRVTYMPVSPPLIVAFI 241 (493)
Q Consensus 167 ~~~~~~~~~~~~~~~~~~~~pl~~~~g~~-~~~~~l~~G~~~~~~~~----~~~~~~~~~l~~~~~t~l~~~P~~~~~l~ 241 (493)
+ ++.++|+++..+|++|..++. .++.++..|+++++... .++..+++.+.++++++++..|..+..+.
T Consensus 213 ~-------~~~~~d~~l~~~p~~h~~g~~~~~~~~l~~g~~~~~~~~~~~~~~~~~~~~~i~~~~~t~~~~~~~~~~l~~ 285 (579)
T PRK09192 213 L-------KVRPGDRCVSWLPFYHDMGLVGFLLTPVATQLSVDYLPTRDFARRPLQWLDLISRNRGTISYSPPFGYELCA 285 (579)
T ss_pred c-------cCCCCCeEEEeCCCCCcchhHHHHHHHHHhCCeeEeeCHHHHHHCHHHHHHHHHhcCcEEEeCCcHHHHHHH
Confidence 4 347899999999999999984 56677889998877642 26889999999999998776555444433
Q ss_pred hccc---CCCCCCCCeeEEEecCCCCCHHHHHHHHHhCC--C---CceeccccccccCCccccccCCCC-----------
Q 011116 242 NSKL---TDKYDLSSLQLLGCGGAPLGKEVTLKFKEKFP--N---VEIRQGYGLTETGGAGSRVIGPDE----------- 302 (493)
Q Consensus 242 ~~~~---~~~~~l~~lr~v~~~Ge~~~~~~~~~~~~~~~--~---~~v~~~yG~tE~g~~~~~~~~~~~----------- 302 (493)
.... ....+++++|.+++||+++++++.+.+.+.++ + ..+++.||+||++...+.......
T Consensus 286 ~~~~~~~~~~~~l~~lr~~~~gG~~l~~~~~~~~~~~~~~~g~~~~~~~~~yG~TE~~~~~~~~~~~~~~~~~~~~~~~~ 365 (579)
T PRK09192 286 RRVNSKDLAELDLSCWRVAGIGADMIRPDVLHQFAEAFAPAGFDDKAFMPSYGLAEATLAVSFSPLGSGIVVEEVDRDRL 365 (579)
T ss_pred HhhccccccccchhhhheeEecCccCCHHHHHHHHHHHHhcCCChhhcccccccccceeEEeccCCCCCceEEEEcHHHh
Confidence 2221 12345789999999999999999999988773 1 358999999999765543211000
Q ss_pred ---------------CCCCCccccccCCceEEEEcCCCCccCCCCCceEEEEeCccccccccCCcccccccccCCCeeec
Q 011116 303 ---------------AERHGSVGRLAELMEAKIVDPATGEALPPGQKGELWLRGPTIMKGYVGDDKATSETVHSEGWLKT 367 (493)
Q Consensus 303 ---------------~~~~~~~g~p~~~~~~~i~d~~~~~~~~~g~~Gel~v~~~~~~~gy~~~~~~~~~~~~~~~~~~T 367 (493)
.....++|+|.++++++|+| ++++.++.|+.|||+++|+.+++||+++ ..+.+.+..++||+|
T Consensus 366 ~~~~~~~~~~~~~~~~~~~~~vG~~~p~~~v~i~d-~~~~~~~~g~~Gel~i~g~~~~~gY~~~-~~~~~~~~~dgw~~T 443 (579)
T PRK09192 366 EYQGKAVAPGAETRRVRTFVNCGKALPGHEIEIRN-EAGMPLPERVVGHICVRGPSLMSGYFRD-EESQDVLAADGWLDT 443 (579)
T ss_pred cCCceeeccCCCCccceeEeecCCcCCCcEEEEEC-CCCCCCCCCCEEEEEecCCchhhhhcCC-ccccccccCCceeec
Confidence 01124689999999999999 6688899999999999999999999999 666666777899999
Q ss_pred cceEEEcCCCcEEEEcccCCeEEeCceeeChHHHHHHHhcCCCcc--eEEEEeeeCCCCCeeEEEEEEeCCCCCCCHHHH
Q 011116 368 GDLCYFDSNGFLFIVDRLKELIKYKAYQVPPVELEHLLHSNPEIA--DAAVIPYPDEEAGQIPMAFVVRKPGSNITEAEI 445 (493)
Q Consensus 368 gD~~~~~~~g~~~~~GR~~d~i~~~G~~i~~~~ie~~l~~~~~v~--~~~v~~~~~~~~~~~~~~~v~~~~~~~~~~~~l 445 (493)
||++++ ++|+++++||.+|+||++|++|+|.+||++|.++|+|. ++++++..++. ++.++++++..+....+.+++
T Consensus 444 GDlg~~-~~G~l~~~GR~dd~i~~~G~~v~p~eIE~~l~~~p~V~~~~~~v~~~~~~~-~~~~~~~v~~~~~~~~~~~~l 521 (579)
T PRK09192 444 GDLGYL-LDGYLYITGRAKDLIIINGRNIWPQDIEWIAEQEPELRSGDAAAFSIAQEN-GEKIVLLVQCRISDEERRGQL 521 (579)
T ss_pred cceeeE-ECCEEEEEeccccEEEECCCccCHHHHHHHHHhcCCccCCcEEEEEeccCC-CeeEEEEEEecCCChHHHHHH
Confidence 999999 99999999999999999999999999999999999998 89999988875 557788888766655667889
Q ss_pred HHHHHhcCC-CCCCcceEEEec--cccCCCCCccchHHHHHHHhhCCCC
Q 011116 446 MDFIAKQVA-PYKKIRRVAFIN--SIPKSTAGKILRRELVTHAISGNLS 491 (493)
Q Consensus 446 ~~~l~~~l~-~~~~p~~~~~~~--~lP~t~~GK~~r~~l~~~~~~~~~~ 491 (493)
++++++.+. .++.|..+.++. +||+|++||++|+.|++++.+....
T Consensus 522 ~~~~~~~l~~~~~~~~~i~~~~~~~lP~t~~GKv~R~~l~~~~~~~~~~ 570 (579)
T PRK09192 522 IHALAALVRSEFGVEAAVELVPPHSLPRTSSGKLSRAKAKKRYLSGAFA 570 (579)
T ss_pred HHHHHHHHHHHhCCCceEEEeCCCCcCCCCCcchhHHHHHHHHHcCCCC
Confidence 999998874 688888888875 8999999999999999999887654
No 111
>PRK05850 acyl-CoA synthetase; Validated
Probab=100.00 E-value=6.2e-57 Score=467.25 Aligned_cols=457 Identities=22% Similarity=0.331 Sum_probs=347.5
Q ss_pred hHHHHHHhhCCCCCCCEEEEECCCCCCcHHHHHHHHHHcCCeeccCCC---CCCHHHHHHHHhhcCCeEEEEcCCCcccC
Q 011116 18 TLSHALSKRDSLCRKTTSLTSSPLPPSTSPVLYFSLLSLGVVISPANP---LSSTSEVSHQIQLSKPSIAFATSHTSYKL 94 (493)
Q Consensus 18 ~lA~~L~~~~gl~~gd~V~l~~~~~~~~~~~~~lA~~~~G~~~v~i~~---~~~~~~l~~~l~~~~~~~il~~~~~~~~~ 94 (493)
++|++| .+.| ++||+|+++++ |+++++++++||+++|++++|+++ ..+.+++.++++++++++++++++....+
T Consensus 47 ~~A~~L-~~~g-~~gd~V~l~~~-n~~~~~~~~lA~~~~G~v~vpl~~~~~~~~~~~l~~~l~~~~~~~il~~~~~~~~~ 123 (578)
T PRK05850 47 NVAEEL-RRHG-STGDRAVILAP-QGLEYIVAFLGALQAGLIAVPLSVPQGGAHDERVSAVLRDTSPSVVLTTSAVVDDV 123 (578)
T ss_pred HHHHHH-HHhC-CCCCEEEEEcC-CcccHHHHHHHHHHcCceEEecCCCCccchHHHHHHHHHhcCCCEEEEcHHHHHHH
Confidence 359999 6778 68999999999 999999999999999999999997 45789999999999999999987655443
Q ss_pred CC--------C-CcEEEecCchhhhhhccCcccccccCCCCCCCCCCeEEEEccCCCCCCccceecchHHHHHHHHHhhh
Q 011116 95 PS--------N-LRTILMDSPEFISLLNQNEDVADFANSNMTVYQSDPAAILYSSGTTGKVKGVLLSHLNVIAIIAGYYH 165 (493)
Q Consensus 95 ~~--------~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~TSGTTG~pK~v~~t~~~~~~~~~~~~~ 165 (493)
.+ . ..++.++..++ . .. . .........+++++++|||||||.||+|.++|.++..++.....
T Consensus 124 ~~~~~~~~~~~~~~~~~~~~~~~---~-~~----~-~~~~~~~~~~d~a~i~~TSGTTG~PKgV~~sh~~l~~~~~~~~~ 194 (578)
T PRK05850 124 TEYVAPQPGQSAPPVIEVDLLDL---D-SP----R-GSDARPRDLPSTAYLQYTSGSTRTPAGVMVSHRNVIANFEQLMS 194 (578)
T ss_pred HHHHhhcccccccceEeeccccc---c-cC----C-ccccCCCCCCCeEEEEeCCCCCCCCceEEEeHHHHHHHHHHHHH
Confidence 21 0 11222221110 0 00 0 11122345689999999999999999999999999877665443
Q ss_pred hc-ccCCCCCCCCCCcEEEEecChhHHHHH-HHHHHHHhcCCeEEEecCC----CHHHHHHHHHhcCeeecccChHHHHH
Q 011116 166 VT-EETDPNEGPPPHPVSFFTLPMFHVFGF-FMLVRAASKGETLVFMERF----DFEKMLKAVENYRVTYMPVSPPLIVA 239 (493)
Q Consensus 166 ~~-~~~~~~~~~~~~~~~~~~~pl~~~~g~-~~~~~~l~~G~~~~~~~~~----~~~~~~~~l~~~~~t~l~~~P~~~~~ 239 (493)
.+ .... .....++++++.+|++|..|+ ..++.+++.|+++++.+.. ++..+++.++++++++. .+|..+..
T Consensus 195 ~~~~~~~--~~~~~~~~~l~~~pl~h~~g~~~~~~~~l~~G~~~~~~~~~~~~~~p~~~~~~i~~~~~~~~-~~p~~~~~ 271 (578)
T PRK05850 195 DYFGDTG--GVPPPDTTVVSWLPFYHDMGLVLGVCAPILGGCPAVLTSPVAFLQRPARWMQLLASNPHAFS-AAPNFAFE 271 (578)
T ss_pred hhccccc--cCCCCcceEEEECCCCCCchhHHHHHHHHhcCCcEEEeCHHHHHHCHHHHHHHHHHcCCeEE-eCCcHHHH
Confidence 22 1100 012467899999999999998 5688999999999988642 68999999999999865 56665443
Q ss_pred HH-hccc---CCCCCCCCeeEEEecCCCCCHHHHHHHHHhCC-----CCceeccccccccCCccccccCCCC--------
Q 011116 240 FI-NSKL---TDKYDLSSLQLLGCGGAPLGKEVTLKFKEKFP-----NVEIRQGYGLTETGGAGSRVIGPDE-------- 302 (493)
Q Consensus 240 l~-~~~~---~~~~~l~~lr~v~~~Ge~~~~~~~~~~~~~~~-----~~~v~~~yG~tE~g~~~~~~~~~~~-------- 302 (493)
+. .... .....++++|.+++||+++++++.++|.+.|+ +..+++.||+||++..+........
T Consensus 272 ~~~~~~~~~~~~~~~~~~lr~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~YG~tE~~~~~~~~~~~~~~~~~~~~~ 351 (578)
T PRK05850 272 LAVRKTSDDDMAGLDLGGVLGIISGSERVHPATLKRFADRFAPFNLRETAIRPSYGLAEATVYVATREPGQPPESVRFDY 351 (578)
T ss_pred HHHHhcchhhhcCcchhhheeEEECcCCCCHHHHHHHHHHHHhcCcCcccccCccchhhhhhheeccCCCCCceEEEECH
Confidence 33 2211 12345678999999999999999999988772 3478999999998754332110000
Q ss_pred ---------------CCCCCccccccCCceEEEEcCCCCccCCCCCceEEEEeCccccccccCCcccccccccC------
Q 011116 303 ---------------AERHGSVGRLAELMEAKIVDPATGEALPPGQKGELWLRGPTIMKGYVGDDKATSETVHS------ 361 (493)
Q Consensus 303 ---------------~~~~~~~g~p~~~~~~~i~d~~~~~~~~~g~~Gel~v~~~~~~~gy~~~~~~~~~~~~~------ 361 (493)
.....+.|.|. +.+++++|++++.+++.|+.|||+++|+.++.||+++++.+.+.|..
T Consensus 352 ~~~~~g~~~~~~~~~g~~~~~~g~p~-~~~~~ivd~~~~~~~~~g~~Gel~v~g~~~~~gY~~~~~~t~~~f~~~~~~~~ 430 (578)
T PRK05850 352 EKLSAGHAKRCETGGGTPLVSYGSPR-SPTVRIVDPDTCIECPAGTVGEIWVHGDNVAAGYWQKPEETERTFGATLVDPS 430 (578)
T ss_pred HHHhCCceEecCCCCCceEEeccCCC-CCEEEEEcCCCCcCCCCCCEEEEEEecCcccccccCChhhhHHHhhccccccc
Confidence 00011234443 57899999888889999999999999999999999999999888742
Q ss_pred -----CCeeeccceEEEcCCCcEEEEcccCCeEEeCceeeChHHHHHHHhcCCCcceEEEEeeeCCCCCeeEEEEEEeCC
Q 011116 362 -----EGWLKTGDLCYFDSNGFLFIVDRLKELIKYKAYQVPPVELEHLLHSNPEIADAAVIPYPDEEAGQIPMAFVVRKP 436 (493)
Q Consensus 362 -----~~~~~TgD~~~~~~~g~~~~~GR~~d~i~~~G~~i~~~~ie~~l~~~~~v~~~~v~~~~~~~~~~~~~~~v~~~~ 436 (493)
++||+|||+++++ +|++++.||.+|+||++|++|+|.+||++|.+++.+ ++++++++++ .++.+++++++.+
T Consensus 431 ~~~~~~~w~~TGDl~~~~-~G~l~~~GR~~d~i~~~G~~i~p~eIE~~l~~~~~~-~~~v~~v~~~-~~~~~~a~v~~~~ 507 (578)
T PRK05850 431 PGTPEGPWLRTGDLGFIS-EGELFIVGRIKDLLIVDGRNHYPDDIEATIQEITGG-RVAAISVPDD-GTEKLVAIIELKK 507 (578)
T ss_pred ccCCCCCeeeccceeeEE-CCEEEEEcccccEEEECCeecCHHHHHHHHHHhcCC-cEEEEEecCC-CceEEEEEEEecc
Confidence 5799999999997 999999999999999999999999999999999985 5888888876 6788899998876
Q ss_pred CCCCCH------HHHHHHHHhcCCCC--CCcceEEEec--cccCCCCCccchHHHHHHHhhCCCCCC
Q 011116 437 GSNITE------AEIMDFIAKQVAPY--KKIRRVAFIN--SIPKSTAGKILRRELVTHAISGNLSKL 493 (493)
Q Consensus 437 ~~~~~~------~~l~~~l~~~l~~~--~~p~~~~~~~--~lP~t~~GK~~r~~l~~~~~~~~~~~~ 493 (493)
+...+. ..+.+++...+... ..|..+.+++ .||+|++||++|+.|++.+.++++.++
T Consensus 508 ~~~~~~~~~~~~~~l~~~v~~~l~~~~~~~~~~~~~~~~~~iP~t~~GKi~R~~l~~~~~~~~~~~~ 574 (578)
T PRK05850 508 RGDSDEEAMDRLRTVKREVTSAISKSHGLSVADLVLVAPGSIPITTSGKIRRAACVEQYRQDEFTRL 574 (578)
T ss_pred ccCcchhhhhhHHHHHHHHHHHHHHHhCCCceEEEEeCCCCcCCCCCchHHHHHHHHHHHcCCcccc
Confidence 543332 34555555544332 2466666664 899999999999999999999988775
No 112
>PRK12582 acyl-CoA synthetase; Provisional
Probab=100.00 E-value=1.4e-56 Score=467.22 Aligned_cols=449 Identities=22% Similarity=0.296 Sum_probs=340.4
Q ss_pred hHHHHHHhhCCCCCCCEEEEECCCCCCcHHHHHHHHHHcCCeeccCCCCCCH-----HHHHHHHhhcCCeEEEEcCCCc-
Q 011116 18 TLSHALSKRDSLCRKTTSLTSSPLPPSTSPVLYFSLLSLGVVISPANPLSST-----SEVSHQIQLSKPSIAFATSHTS- 91 (493)
Q Consensus 18 ~lA~~L~~~~gl~~gd~V~l~~~~~~~~~~~~~lA~~~~G~~~v~i~~~~~~-----~~l~~~l~~~~~~~il~~~~~~- 91 (493)
++|++| .+.|+++||+|+++++ |+++++++++||+++|++++|++|.++. +++.++++.+++++++++....
T Consensus 92 ~lA~~L-~~~Gv~~gd~V~i~~~-n~~e~~~~~lA~~~~G~v~vpl~p~~~~~~~~~~~l~~~l~~~~~~~vi~~~~~~~ 169 (624)
T PRK12582 92 ALAQAL-LDLGLDPGRPVMILSG-NSIEHALMTLAAMQAGVPAAPVSPAYSLMSHDHAKLKHLFDLVKPRVVFAQSGAPF 169 (624)
T ss_pred HHHHHH-HHcCCCCCCEEEEecC-CCHHHHHHHHHHHHcCCeEeeccCccccccCCHHHHHHHHHhcCCcEEEecCHHHH
Confidence 359999 7889999999999999 9999999999999999999999999874 8999999999999999976311
Q ss_pred ----ccCCC-CCcEEEecC-------chhhhhhccCcccccccCCCCCCCCCCeEEEEccCCCCCCccceecchHHHHHH
Q 011116 92 ----YKLPS-NLRTILMDS-------PEFISLLNQNEDVADFANSNMTVYQSDPAAILYSSGTTGKVKGVLLSHLNVIAI 159 (493)
Q Consensus 92 ----~~~~~-~~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~TSGTTG~pK~v~~t~~~~~~~ 159 (493)
..+.. ..+++.++. ..+.++....... ..........++++++++|||||||.||+|.++|.++...
T Consensus 170 ~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~d~a~i~yTSGTTG~PKgV~~th~~l~~~ 248 (624)
T PRK12582 170 ARALAALDLLDVTVVHVTGPGEGIASIAFADLAATPPTA-AVAAAIAAITPDTVAKYLFTSGSTGMPKAVINTQRMMCAN 248 (624)
T ss_pred HHHHHhhhhcCceEEEEcCCCcccccccHHHHhhcCCcc-hhhhhhccCCCCceEEEEEcCCCCCCCceEEeeHHHHHHH
Confidence 11111 233444332 1233333221100 0001112345789999999999999999999999999887
Q ss_pred HHHhhhhcccCCCCCCCCCCcEEEEecChhHHHHH-HHHHHHHhcCCeEEEecC-CC---HHHHHHHHHhcCeeecccCh
Q 011116 160 IAGYYHVTEETDPNEGPPPHPVSFFTLPMFHVFGF-FMLVRAASKGETLVFMER-FD---FEKMLKAVENYRVTYMPVSP 234 (493)
Q Consensus 160 ~~~~~~~~~~~~~~~~~~~~~~~~~~~pl~~~~g~-~~~~~~l~~G~~~~~~~~-~~---~~~~~~~l~~~~~t~l~~~P 234 (493)
.......+... .....++++..+|++|.+++ ..++.++..|+++++.+. .+ ...+++.++++++|++.++|
T Consensus 249 ~~~~~~~~~~~----~~~~~~~~l~~lPl~h~~g~~~~~~~~l~~G~tvvl~~~~~~~~~~~~~~~~i~~~~~t~~~~vP 324 (624)
T PRK12582 249 IAMQEQLRPRE----PDPPPPVSLDWMPWNHTMGGNANFNGLLWGGGTLYIDDGKPLPGMFEETIRNLREISPTVYGNVP 324 (624)
T ss_pred HHHHHHhcccc----CCCCCceEEEechHHHHHhHHHHHHHHHhCceEEEEcCCCcccchHHHHHHHHHhcCCeEEeccC
Confidence 66554433220 00135789999999999998 456778899999988753 22 34567788899999999999
Q ss_pred HHHHHHHhcccCCC----CCCCCeeEEEecCCCCCHHHHHHHHHh----CC-CCceeccccccccCCccccccCCCCCCC
Q 011116 235 PLIVAFINSKLTDK----YDLSSLQLLGCGGAPLGKEVTLKFKEK----FP-NVEIRQGYGLTETGGAGSRVIGPDEAER 305 (493)
Q Consensus 235 ~~~~~l~~~~~~~~----~~l~~lr~v~~~Ge~~~~~~~~~~~~~----~~-~~~v~~~yG~tE~g~~~~~~~~~~~~~~ 305 (493)
.++..|++...... ..++++|.+++||+++++++.+++.+. ++ ++.+++.||+||++.+.... ......
T Consensus 325 ~~~~~l~~~~~~~~~~~~~~~~slr~i~~gGa~l~~~~~~~~~~~~~~~~g~~~~l~~~YG~TE~~~~~~~~--~~~~~~ 402 (624)
T PRK12582 325 AGYAMLAEAMEKDDALRRSFFKNLRLMAYGGATLSDDLYERMQALAVRTTGHRIPFYTGYGATETAPTTTGT--HWDTER 402 (624)
T ss_pred HHHHHHHHHHhhCHHHHHHHhhheeEEEecCCCCCHHHHHHHHHHHHhhcCCCceEEeccccccccceeecc--cCCCCC
Confidence 99998876543221 236789999999999999999999886 31 36899999999998765421 112245
Q ss_pred CCccccccCCceEEEEcCCCCccCCCCCceEEEEeCccccccccCCcccccccccCCCeeeccceEEE-c---CCCcEEE
Q 011116 306 HGSVGRLAELMEAKIVDPATGEALPPGQKGELWLRGPTIMKGYVGDDKATSETVHSEGWLKTGDLCYF-D---SNGFLFI 381 (493)
Q Consensus 306 ~~~~g~p~~~~~~~i~d~~~~~~~~~g~~Gel~v~~~~~~~gy~~~~~~~~~~~~~~~~~~TgD~~~~-~---~~g~~~~ 381 (493)
.+++|+|++|+++++++ .|+.|||+++|+.++.||+++++.+.+.|+.+|||+|||+|++ + ++|++++
T Consensus 403 ~~svG~p~pg~~v~i~~--------~G~~GEl~vrg~~v~~GY~~~p~~t~~~f~~dgw~~TGDlg~~~d~~~~~g~l~i 474 (624)
T PRK12582 403 VGLIGLPLPGVELKLAP--------VGDKYEVRVKGPNVTPGYHKDPELTAAAFDEEGFYRLGDAARFVDPDDPEKGLIF 474 (624)
T ss_pred CCCCCcCCCCcEEEEcc--------CCCceEEEEECCcccccccCCccchhhhcCccCCccccceEEecCCcCCCCceEE
Confidence 67899999999999864 4677999999999999999999999999988999999999998 4 4689999
Q ss_pred EcccCCeEEe-CceeeChHHHH--HHHhcCCCcceEEEEeeeCCCCCeeEEEEEEeC----------CCC----CCCHHH
Q 011116 382 VDRLKELIKY-KAYQVPPVELE--HLLHSNPEIADAAVIPYPDEEAGQIPMAFVVRK----------PGS----NITEAE 444 (493)
Q Consensus 382 ~GR~~d~i~~-~G~~i~~~~ie--~~l~~~~~v~~~~v~~~~~~~~~~~~~~~v~~~----------~~~----~~~~~~ 444 (493)
.||.+|+|++ +|++|+|.+|| .++.++|.|.+++|++..++..+ ++|++. ++. ..+.++
T Consensus 475 ~GR~~d~i~~~~G~~i~p~~iE~e~~l~~~p~V~~a~VvG~~~~~~g----~lv~p~~~~~~~~~~~~~~~~~~~~~~~~ 550 (624)
T PRK12582 475 DGRVAEDFKLSTGTWVSVGTLRPDAVAACSPVIHDAVVAGQDRAFIG----LLAWPNPAACRQLAGDPDAAPEDVVKHPA 550 (624)
T ss_pred eccchhhEecCCCcEechHHHHHHHHHhcCcchheEEEEcCCCCcEE----EEEecCHHHHHHHHhcCCCCHHHHhcCHH
Confidence 9999999997 89999998885 68889999999999998766544 333322 110 012345
Q ss_pred HHHHHHhc-------CCCCC-CcceEEEeccccC------CCCCccchHHHHHHHhh
Q 011116 445 IMDFIAKQ-------VAPYK-KIRRVAFINSIPK------STAGKILRRELVTHAIS 487 (493)
Q Consensus 445 l~~~l~~~-------l~~~~-~p~~~~~~~~lP~------t~~GK~~r~~l~~~~~~ 487 (493)
+.++++.. ++.+. +|+++.+++++|+ |++||+.|+.+.+.+.+
T Consensus 551 l~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~t~~~~~~R~~~~~~y~~ 607 (624)
T PRK12582 551 VLAILREGLSAHNAEAGGSSSRIARALLMTEPPSIDAGEITDKGYINQRAVLERRAA 607 (624)
T ss_pred HHHHHHHHHHHHHhhcCCChhheEEEEEeCCCCCccCCcCCccccccHHHHHHHHHH
Confidence 55555554 44555 9999999988875 57788889988777654
No 113
>PRK08308 acyl-CoA synthetase; Validated
Probab=100.00 E-value=8.6e-55 Score=432.46 Aligned_cols=390 Identities=19% Similarity=0.244 Sum_probs=336.8
Q ss_pred cchhhhHHHHHHhhCCCCCCCEEEEECCCCCCcHHHHHHHHHHcCCeeccCCCCCCHHHHHHHHhhcCCeEEEEcCCCcc
Q 011116 13 SSARFTLSHALSKRDSLCRKTTSLTSSPLPPSTSPVLYFSLLSLGVVISPANPLSSTSEVSHQIQLSKPSIAFATSHTSY 92 (493)
Q Consensus 13 ~~~~~~lA~~L~~~~gl~~gd~V~l~~~~~~~~~~~~~lA~~~~G~~~v~i~~~~~~~~l~~~l~~~~~~~il~~~~~~~ 92 (493)
+++++ |.+| + .|+++|++|+++++ |+++++++++||+++|++++|+++..+.+.+..++++++++.+++++....
T Consensus 17 ~~~~~--a~~l-~-~~~~~g~~V~i~~~-~~~~~~~~~la~~~~G~~~v~l~~~~~~~~~~~~~~~~~~~~~i~~~~~~~ 91 (414)
T PRK08308 17 RLQRY--EEME-Q-FQEAAGNRFAVCLK-DPFDIITLVFFLKEKGASVLPIHPDTPKEAAIRMAKRAGCHGLLYGESDFT 91 (414)
T ss_pred HHHHH--HHHH-H-cCCCCCCEEEEECC-CChHHHHHHHHHHHCCeEEEecCCCCCHHHHHHHHHhCCCCEEEecCcccc
Confidence 34454 7777 5 58999999999999 999999999999999999999999999999999999999999999763110
Q ss_pred cCCCCCcEEEecCchhhhhhccCcccccccCCCCCCCCCCeEEEEccCCCCCCccceecchHHHHHHHHHhhhhcccCCC
Q 011116 93 KLPSNLRTILMDSPEFISLLNQNEDVADFANSNMTVYQSDPAAILYSSGTTGKVKGVLLSHLNVIAIIAGYYHVTEETDP 172 (493)
Q Consensus 93 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~TSGTTG~pK~v~~t~~~~~~~~~~~~~~~~~~~~ 172 (493)
... .....++++++++|||||||.||+|.++|+++..++......+.
T Consensus 92 -------------------~~~----------~~~~~~~~~~~i~~TSGtTG~PKgv~~s~~~l~~~~~~~~~~~~---- 138 (414)
T PRK08308 92 -------------------KLE----------AVNYLAEEPSLLQYSSGTTGEPKLIRRSWTEIDREIEAYNEALN---- 138 (414)
T ss_pred -------------------ccc----------CCCCCCCCceEEEECCCCCCCCcEEEEehHhHHHHHHHHHHhhC----
Confidence 000 01234688999999999999999999999999988877666653
Q ss_pred CCCCCCCcEEEEecChhHHHHH-HHHHHHHhcCCeEEEecCCCHHHHHHHHHhcCeeecccChHHHHHHHhcccCCCCCC
Q 011116 173 NEGPPPHPVSFFTLPMFHVFGF-FMLVRAASKGETLVFMERFDFEKMLKAVENYRVTYMPVSPPLIVAFINSKLTDKYDL 251 (493)
Q Consensus 173 ~~~~~~~~~~~~~~pl~~~~g~-~~~~~~l~~G~~~~~~~~~~~~~~~~~l~~~~~t~l~~~P~~~~~l~~~~~~~~~~l 251 (493)
...+++++...|++|.+++ ..++.++..|+++++.+..++..+++.++++++|++.++|+++..+.+.... .
T Consensus 139 ---~~~~~~~~~~~p~~h~~g~~~~~~~~l~~G~~~~~~~~~~~~~~~~~l~~~~~t~~~~~P~~~~~l~~~~~~----~ 211 (414)
T PRK08308 139 ---CEQDETPIVACPVTHSYGLICGVLAALTRGSKPVIITNKNPKFALNILRNTPQHILYAVPLMLHILGRLLPG----T 211 (414)
T ss_pred ---CCcccEEEEecCcHHHHHHHHHHHHHHHcCCEEEecCCCCHHHHHHHHHHhCCeEEEcCHHHHHHHHhcCCc----c
Confidence 3678899999999999998 5788999999999999888999999999999999999999999999876432 1
Q ss_pred CCeeEEEecCCCCCHHHHHHHHHhCCCCceeccccccccCCccccccCCCCCCCCCccccccCCceEEEEcCCCCccCCC
Q 011116 252 SSLQLLGCGGAPLGKEVTLKFKEKFPNVEIRQGYGLTETGGAGSRVIGPDEAERHGSVGRLAELMEAKIVDPATGEALPP 331 (493)
Q Consensus 252 ~~lr~v~~~Ge~~~~~~~~~~~~~~~~~~v~~~yG~tE~g~~~~~~~~~~~~~~~~~~g~p~~~~~~~i~d~~~~~~~~~ 331 (493)
..++.++++|+++++++.+++++. ..++++.||+||++.+.... .......+|+|.+++++++.+ + .
T Consensus 212 ~~l~~~~~~G~~l~~~~~~~~~~~--~~~~~~~YG~tE~~~~~~~~----~~~~~~~~G~p~~~~~~~~~~-~------~ 278 (414)
T PRK08308 212 FQFHAVMTSGTPLPEAWFYKLRER--TTYMMQQYGCSEAGCVSICP----DMKSHLDLGNPLPHVSVSAGS-D------E 278 (414)
T ss_pred ccccEEEEccCCCCHHHHHHHHHh--CChhhhccCccccCCeeecC----CCCCCCccCccCCCeEEEEec-C------C
Confidence 368889999999999999999987 56899999999998644321 123456799999999999876 2 2
Q ss_pred CCceEEEEeCccccccccCCcccccccccCCCeeeccceEEEcCCCcEEEEcccCCeEEeCceeeChHHHHHHHhcCCCc
Q 011116 332 GQKGELWLRGPTIMKGYVGDDKATSETVHSEGWLKTGDLCYFDSNGFLFIVDRLKELIKYKAYQVPPVELEHLLHSNPEI 411 (493)
Q Consensus 332 g~~Gel~v~~~~~~~gy~~~~~~~~~~~~~~~~~~TgD~~~~~~~g~~~~~GR~~d~i~~~G~~i~~~~ie~~l~~~~~v 411 (493)
++.||+++++ .++||+|||++++++||++++.||.+|+||++|++|+|.+||+++.++|+|
T Consensus 279 ~~~gel~v~~-------------------~~~~~~TGDl~~~~~dg~l~~~GR~~~~ik~~G~~v~p~eIE~~l~~~~~v 339 (414)
T PRK08308 279 NAPEEIVVKM-------------------GDKEIFTKDLGYKSERGTLHFMGRMDDVINVSGLNVYPIEVEDVMLRLPGV 339 (414)
T ss_pred CCCceEEEEc-------------------CCceEECCceEEECCCccEEEecccCCeEEECCEEECHHHHHHHHHhCCCe
Confidence 4569999974 257999999999999999999999999999999999999999999999999
Q ss_pred ceEEEEeeeCCCCCeeEEEEEEeCCCCCCCHHHHHHHHHhcCCCCCCcceEEEeccccCCCCCccchHHH
Q 011116 412 ADAAVIPYPDEEAGQIPMAFVVRKPGSNITEAEIMDFIAKQVAPYKKIRRVAFINSIPKSTAGKILRREL 481 (493)
Q Consensus 412 ~~~~v~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~l~~~l~~~~~p~~~~~~~~lP~t~~GK~~r~~l 481 (493)
.+++|++..++..++.+.++++... ..+.++++++++++++++++|..+.+++++|+|++||++|+.|
T Consensus 340 ~~a~v~~~~~~~~~~~~~~~v~~~~--~~~~~~l~~~l~~~l~~~~~P~~i~~v~~iP~t~~GKi~r~~~ 407 (414)
T PRK08308 340 QEAVVYRGKDPVAGERVKAKVISHE--EIDPVQLREWCIQHLAPYQVPHEIESVTEIPKNANGKVSRKLL 407 (414)
T ss_pred eEEEEEeccCCCCCceEEEEEEeCC--CCCHHHHHHHHHHhCccccCCcEEEEeccCCCCCCcCeehhhh
Confidence 9999999988888888888888654 4678899999999999999999999999999999999999954
No 114
>PRK07768 long-chain-fatty-acid--CoA ligase; Validated
Probab=100.00 E-value=1.9e-54 Score=445.62 Aligned_cols=450 Identities=21% Similarity=0.263 Sum_probs=346.6
Q ss_pred cchhhhHHHHHHhhCCCCCCCEEEEECCCCCCcHHHHHHHHHHcCCeeccCCCCCCHHHH-------HHHHhhcCCeEEE
Q 011116 13 SSARFTLSHALSKRDSLCRKTTSLTSSPLPPSTSPVLYFSLLSLGVVISPANPLSSTSEV-------SHQIQLSKPSIAF 85 (493)
Q Consensus 13 ~~~~~~lA~~L~~~~gl~~gd~V~l~~~~~~~~~~~~~lA~~~~G~~~v~i~~~~~~~~l-------~~~l~~~~~~~il 85 (493)
+++++ |.+| .+.|+++||+|+++++ |+++++++++||+++|++++++++..+.+++ .++++.++++.++
T Consensus 38 ~v~~~--a~~L-~~~g~~~gd~V~l~~~-~~~~~~~~~la~~~~g~v~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~v~ 113 (545)
T PRK07768 38 RARRI--AGGL-AAAGVGPGDAVAVLAG-APVEIAPTAQGLWMRGASLTMLHQPTPRTDLAVWAEDTLRVIGMIGAKAVV 113 (545)
T ss_pred HHHHH--HHHH-HHhCCCCCCEEEEECC-CchHHHHHHHHHHHcCccccccCCCCCcchhHHHHHHHHHHHHhCCCCEEE
Confidence 35555 9999 7789999999999999 9999999999999999999999988775544 4567888999999
Q ss_pred EcCCCcccCCC----CCcEEEecCchhhhhhccCcccccccCCCCCCCCCCeEEEEccCCCCCCccceecchHHHHHHHH
Q 011116 86 ATSHTSYKLPS----NLRTILMDSPEFISLLNQNEDVADFANSNMTVYQSDPAAILYSSGTTGKVKGVLLSHLNVIAIIA 161 (493)
Q Consensus 86 ~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~TSGTTG~pK~v~~t~~~~~~~~~ 161 (493)
+++.....+.. ....+ .+.++..... .......++++++++|||||||.||++.++|+++...+.
T Consensus 114 ~~~~~~~~~~~~~~~~~~~~-----~~~~l~~~~~------~~~~~~~~~~~a~i~~TSGtTG~PKgv~~s~~~~~~~~~ 182 (545)
T PRK07768 114 VGEPFLAAAPVLEEKGIRVL-----TVADLLAADP------IDPVETGEDDLALMQLTSGSTGSPKAVQITHGNLYANAE 182 (545)
T ss_pred ecchhhhhhhhhcccCCcee-----ehhhhcccCC------CCcCCCCCCCEEEEEeCCCCCCCCceEEEcHHHHHHHHH
Confidence 98754332211 11122 2223332211 122345679999999999999999999999999988877
Q ss_pred HhhhhcccCCCCCCCCCC-cEEEEecChhHHHHHH-HHHHHHhcCCeEEEecC----CCHHHHHHHHHhcCeeecccChH
Q 011116 162 GYYHVTEETDPNEGPPPH-PVSFFTLPMFHVFGFF-MLVRAASKGETLVFMER----FDFEKMLKAVENYRVTYMPVSPP 235 (493)
Q Consensus 162 ~~~~~~~~~~~~~~~~~~-~~~~~~~pl~~~~g~~-~~~~~l~~G~~~~~~~~----~~~~~~~~~l~~~~~t~l~~~P~ 235 (493)
.....++. .++ |++++.+|++|..++. .+..++..|+++++... .++..+.+.+++++++++.+.|.
T Consensus 183 ~~~~~~~~-------~~~~d~~~~~~p~~~~~g~~~~~~~~l~~g~~~v~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~ 255 (545)
T PRK07768 183 AMFVAAEF-------DVETDVMVSWLPLFHDMGMVGFLTVPMYFGAELVKVTPMDFLRDPLLWAELISKYRGTMTAAPNF 255 (545)
T ss_pred HHHHhcCC-------CCCCceeEEeCCCccchHHHHHHHHHHHCCceEEEeCHHHHHHhHHHHHHHHHHhCCEEEECchH
Confidence 66665533 554 8999999999999984 56678999999988754 26778899999999999887777
Q ss_pred HHHHHHhcc----cCCCCCCCCeeEEEecCCCCCHHHHHHHHHh---C--CCCceeccccccccCCccccccCCC-----
Q 011116 236 LIVAFINSK----LTDKYDLSSLQLLGCGGAPLGKEVTLKFKEK---F--PNVEIRQGYGLTETGGAGSRVIGPD----- 301 (493)
Q Consensus 236 ~~~~l~~~~----~~~~~~l~~lr~v~~~Ge~~~~~~~~~~~~~---~--~~~~v~~~yG~tE~g~~~~~~~~~~----- 301 (493)
++..+.... .....+++++|.++++|+++++++.+++.+. | +...+++.||+||++..........
T Consensus 256 ~~~~l~~~~~~~~~~~~~~~~~lr~~~~~g~~~~~~~~~~~~~~~~~~g~~~~~~~~~yG~tE~~~~~~~~~~~~~~~~~ 335 (545)
T PRK07768 256 AYALLARRLRRQAKPGAFDLSSLRFALNGAEPIDPADVEDLLDAGARFGLRPEAILPAYGMAEATLAVSFSPCGAGLVVD 335 (545)
T ss_pred HHHHHHHHHhccccccCCCchheeeEEeccCCCCHHHHHHHHHHHHhcCCCcccccccccccccceEEEccCCCCCccee
Confidence 776655432 1123567899999999999999999999874 4 1235999999999986543321110
Q ss_pred -------------------CCCCCCccccccCCceEEEEcCCCCccCCCCCceEEEEeCccccccccCCcccccccccCC
Q 011116 302 -------------------EAERHGSVGRLAELMEAKIVDPATGEALPPGQKGELWLRGPTIMKGYVGDDKATSETVHSE 362 (493)
Q Consensus 302 -------------------~~~~~~~~g~p~~~~~~~i~d~~~~~~~~~g~~Gel~v~~~~~~~gy~~~~~~~~~~~~~~ 362 (493)
......++|+|.++++++++| ++++++++|+.|||+++|+.+++||++.+.... .++.+
T Consensus 336 ~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~g~~~~i~~-~~~~~~~~g~~Gel~v~~~~~~~gy~~~~~~~~-~~~~~ 413 (545)
T PRK07768 336 EVDADLLAALRRAVPATKGNTRRLATLGPPLPGLEVRVVD-EDGQVLPPRGVGVIELRGESVTPGYLTMDGFIP-AQDAD 413 (545)
T ss_pred eechhHhhccCceeccCCCCcceEEeccCCCCCCEEEEEC-CCCCCCCCCCEEEEEEccCcccccccCCCCCcc-cccCC
Confidence 012345799999999999999 778999999999999999999999998654433 33467
Q ss_pred CeeeccceEEEcCCCcEEEEcccCCeEEeCceeeChHHHHHHHhcCCCcceEEEEeeeC--CCCCeeEEEEEEeCCCC-C
Q 011116 363 GWLKTGDLCYFDSNGFLFIVDRLKELIKYKAYQVPPVELEHLLHSNPEIADAAVIPYPD--EEAGQIPMAFVVRKPGS-N 439 (493)
Q Consensus 363 ~~~~TgD~~~~~~~g~~~~~GR~~d~i~~~G~~i~~~~ie~~l~~~~~v~~~~v~~~~~--~~~~~~~~~~v~~~~~~-~ 439 (493)
+||+|||+++++++|.++++||.+|+||++|.+|++.+||+.+.++|+|.++++++... ...++...++++..... .
T Consensus 414 g~~~TGDl~~~~~~g~l~~~GR~~d~i~~~G~~v~~~eiE~~l~~~~~v~~~~vv~~~~~~~~~~~~~~~~v~~~~~~~~ 493 (545)
T PRK07768 414 GWLDTGDLGYLTEEGEVVVCGRVKDVIIMAGRNIYPTDIERAAARVEGVRPGNAVAVRLDAGHSREGFAVAVESNAFEDP 493 (545)
T ss_pred CeeeccceEEEecCCEEEEEccccceEEECCEecCHHHHHHHHHhCcccccceEEEEEecCCCCceEEEEEEEecccccH
Confidence 89999999999999999999999999999999999999999999999999987776643 33344555555443321 1
Q ss_pred CCHHHHHHHHHhcCCCC--CCcceEEEec--cccCCCCCccchHHHHHHHh
Q 011116 440 ITEAEIMDFIAKQVAPY--KKIRRVAFIN--SIPKSTAGKILRRELVTHAI 486 (493)
Q Consensus 440 ~~~~~l~~~l~~~l~~~--~~p~~~~~~~--~lP~t~~GK~~r~~l~~~~~ 486 (493)
....++.+++++.+..+ ..|..+.+++ +||+|++||++|+.|+++|.
T Consensus 494 ~~~~~l~~~~~~~l~~~~~~~p~~v~~v~~~~lP~t~~GKi~r~~l~~~~~ 544 (545)
T PRK07768 494 AEVRRIRHQVAHEVVAEVGVRPRNVVVLGPGSIPKTPSGKLRRANAAELVT 544 (545)
T ss_pred HHHHHHHHHHHHHHHHHhCCCccEEEEeCCCcCCCCCchhHHHHHHHHhcC
Confidence 22245666776665443 5788888886 89999999999999999875
No 115
>KOG1180 consensus Acyl-CoA synthetase [Lipid transport and metabolism]
Probab=100.00 E-value=2e-53 Score=397.44 Aligned_cols=457 Identities=23% Similarity=0.326 Sum_probs=363.2
Q ss_pred cccchhhhHHHHHHhhCCCCCCCE-EEEECCCCCCcHHHHHHHHHHcCCeeccCCCCCCHHHHHHHHhhcCCeEEEEcCC
Q 011116 11 ANSSARFTLSHALSKRDSLCRKTT-SLTSSPLPPSTSPVLYFSLLSLGVVISPANPLSSTSEVSHQIQLSKPSIAFATSH 89 (493)
Q Consensus 11 ~~~~~~~~lA~~L~~~~gl~~gd~-V~l~~~~~~~~~~~~~lA~~~~G~~~v~i~~~~~~~~l~~~l~~~~~~~il~~~~ 89 (493)
..+.+++ |++| .+.|++++++ ++++.+ .+.+|+++++||++-+..+|.+...+..+.+.|-|.+++++.++|+.+
T Consensus 96 ~~~~~~~--gsGL-~~lG~k~~e~k~~iFa~-TraeWm~ta~gC~~q~ipvVT~Y~TLGeeal~hsl~Et~~~~i~T~~~ 171 (678)
T KOG1180|consen 96 YERVHNF--GSGL-VKLGLKPKETKIAIFAE-TRAEWMITAQGCFSQNIPVVTAYATLGEEALIHSLNETESTAIFTDSE 171 (678)
T ss_pred HHHHHHH--HHHH-HHhCCCCCCCeEEEEec-chHHHHHHHHHHHhcCCeEEEEehhcChhhhhhhhccccceEEEeCHH
Confidence 3445555 9999 8899998777 999999 999999999999999999999999999999999999999999999987
Q ss_pred CcccCCC------CCc-EEEecC---c-----------------hhhhhhccCcccccccCCCCCCCCCCeEEEEccCCC
Q 011116 90 TSYKLPS------NLR-TILMDS---P-----------------EFISLLNQNEDVADFANSNMTVYQSDPAAILYSSGT 142 (493)
Q Consensus 90 ~~~~~~~------~~~-~~~~~~---~-----------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~TSGT 142 (493)
..+.+.. ..+ ++.++. . +|.++..-.. ....++.+..++|+|+|+|||||
T Consensus 172 LL~kl~~~l~~~~~vk~II~~d~id~~~~~~~v~~i~~p~i~i~Sf~~v~~lG~---~~~~~~~~P~p~Dia~IMYTSGS 248 (678)
T KOG1180|consen 172 LLPKLKAPLKQAKTVKHIIYFDPIDYDAAKDDVNSIVRPDIKIISFDDVEKLGK---ENEIPPHPPKPSDIACIMYTSGS 248 (678)
T ss_pred HHHHHHHHHhccCceeEEEEecCCCCccchhhhhhhccCCeEEEEHHHHHhhCC---cCCCCCCCCCCCceEEEEEcCCC
Confidence 7664432 222 344442 1 1222222211 11122334478999999999999
Q ss_pred CCCccceecchHHHHHHHHHhhhhcccCCCCCCCCCCcEEEEecChhHHHHHHHHHHHHhcCCeEEEecCCCHHH-----
Q 011116 143 TGKVKGVLLSHLNVIAIIAGYYHVTEETDPNEGPPPHPVSFFTLPMFHVFGFFMLVRAASKGETLVFMERFDFEK----- 217 (493)
Q Consensus 143 TG~pK~v~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pl~~~~g~~~~~~~l~~G~~~~~~~~~~~~~----- 217 (493)
||.||||+++|.|+++.+....+... .+++.|+++..+||.|++-+..-+.+++.|+++-..+..+..+
T Consensus 249 TG~PKGVml~H~NiVA~~~G~~~~v~------~lg~~D~yi~yLPLAHIlEl~aE~~~ft~G~~iGY~S~~TLtdts~ki 322 (678)
T KOG1180|consen 249 TGLPKGVMLTHSNIVAGVTGVGENVP------ELGPKDRYIAYLPLAHILELTAELVCFTWGGRIGYSSPLTLTDTSSKI 322 (678)
T ss_pred CCCCceEEEecccHHhhhhhhcccCc------ccCCCceEEEechHHHHHHHHHHHHHHhhCCEeecCCcceecccchhh
Confidence 99999999999999999988777663 3589999999999999999999999999999988876432211
Q ss_pred ---HHHHHHhcCeeecccChHHHHHHHhcccCC--------------------------CC----------------CCC
Q 011116 218 ---MLKAVENYRVTYMPVSPPLIVAFINSKLTD--------------------------KY----------------DLS 252 (493)
Q Consensus 218 ---~~~~l~~~~~t~l~~~P~~~~~l~~~~~~~--------------------------~~----------------~l~ 252 (493)
.--.+..++||.+.++|.++.++.+....+ .. .-.
T Consensus 323 ~kg~kGD~~~lkPTiM~~VpAV~drVrKgVl~kV~~~~~~~k~lF~~aY~~K~~~~~~~g~~s~~ld~lVFkKIr~~lGG 402 (678)
T KOG1180|consen 323 KKGCKGDLTELKPTIMAAVPAVMDRVRKGVLSKVNAMPGLQKKLFWTAYERKLSLIERNGPGSPLLDALVFKKIRALLGG 402 (678)
T ss_pred ccCCcCccccccchhhhhhHHHHHHHHHHHHHHHhhchHHHHHHHHHHHHHHHHHHhccCCchhhHHHHHHHHHHHHhCC
Confidence 112345789999999999887764432100 00 014
Q ss_pred CeeEEEecCCCCCHHHHHHHHHhCCCCceeccccccccCCccccccCCCCCCCCCccccccCCceEEEEcCCCCccCCCC
Q 011116 253 SLQLLGCGGAPLGKEVTLKFKEKFPNVEIRQGYGLTETGGAGSRVIGPDEAERHGSVGRLAELMEAKIVDPATGEALPPG 332 (493)
Q Consensus 253 ~lr~v~~~Ge~~~~~~~~~~~~~~~~~~v~~~yG~tE~g~~~~~~~~~~~~~~~~~~g~p~~~~~~~i~d~~~~~~~~~g 332 (493)
.+|.+++||++++++..+.+.-.+ .+++.+.||.||++..++.. ...+...+.+|.|++.++++++|-+++.-.+.+
T Consensus 403 ~lR~~LsGGapLS~dtQrF~nic~-C~Pv~qGYGLTEtca~~tv~--e~~d~~~g~vG~pl~c~eiKLvdw~EgGY~~~~ 479 (678)
T KOG1180|consen 403 NLRYILSGGAPLSPDTQRFMNICF-CCPVLQGYGLTETCAAATVL--EPEDFSTGRVGAPLPCCEIKLVDWEEGGYFAKN 479 (678)
T ss_pred ceEEEEeCCCCCCHHHHHHHHHhc-cccccccccccchhcccEec--ChhhcccccccCCccceEEEEEEhhhcCccCCC
Confidence 799999999999999999998888 88999999999999877663 223456679999999999999998888777666
Q ss_pred C--ceEEEEeCccccccccCCcccccccccC-CC--eeeccceEEEcCCCcEEEEcccCCeEEe-CceeeChHHHHHHHh
Q 011116 333 Q--KGELWLRGPTIMKGYVGDDKATSETVHS-EG--WLKTGDLCYFDSNGFLFIVDRLKELIKY-KAYQVPPVELEHLLH 406 (493)
Q Consensus 333 ~--~Gel~v~~~~~~~gy~~~~~~~~~~~~~-~~--~~~TgD~~~~~~~g~~~~~GR~~d~i~~-~G~~i~~~~ie~~l~ 406 (493)
. .||||++|+.++.||+++++.+.+.|.. +| ||+|||+|++++||++.+++|++|.+|+ +|+.|+++.+|.+++
T Consensus 480 ~PPrGEI~i~G~~vt~gY~kn~ekT~e~ft~~~G~~WF~TGDIGe~~pdG~LkIIDRKKdLVKlq~GEYIsL~KvEa~l~ 559 (678)
T KOG1180|consen 480 KPPRGEILIGGPNVTMGYYKNEEKTKEDFTVEDGQRWFRTGDIGEFHPDGCLKIIDRKKDLVKLQNGEYISLGKVEAALR 559 (678)
T ss_pred CCCCceEEecCCccChhhhCChhhhhhhceecCCcEEEeccccceecCCCcEEEeechhhhhhhcccceeehHHHHHHHh
Confidence 5 8999999999999999999999999977 78 9999999999999999999999999999 999999999999999
Q ss_pred cCCCcceEEEEeeeCCCCCeeEEEEEEeCCCC--------CCCH-------------HHHHHHH-----HhcCCCCCCcc
Q 011116 407 SNPEIADAAVIPYPDEEAGQIPMAFVVRKPGS--------NITE-------------AEIMDFI-----AKQVAPYKKIR 460 (493)
Q Consensus 407 ~~~~v~~~~v~~~~~~~~~~~~~~~v~~~~~~--------~~~~-------------~~l~~~l-----~~~l~~~~~p~ 460 (493)
..|.|.+..|.+.... ..++++||+.++. .+.. +++.+.+ ..+|....+|.
T Consensus 560 s~p~V~NICvyAd~~~---s~~VaiVVPn~~~lt~lA~k~Gi~~~~~e~lc~d~k~~~~v~k~L~~~ak~~~L~~iEip~ 636 (678)
T KOG1180|consen 560 SSPYVDNICVYADSNK---SKPVAIVVPNQKHLTKLAEKAGISGSTWEELCEDKKVVKAVLKELIEAAKSQKLERIEIPA 636 (678)
T ss_pred cCcchhheEEeccccc---ceeEEEEcCCchHHHHHHHHcCCChhhHHHHhccHHHHHHHHHHHHHHHHhcccccccccc
Confidence 9999999888876544 4689999987541 1111 1222222 33688999999
Q ss_pred eEEEeccccC-------CCCCccchHHHHHHHhh
Q 011116 461 RVAFINSIPK-------STAGKILRRELVTHAIS 487 (493)
Q Consensus 461 ~~~~~~~lP~-------t~~GK~~r~~l~~~~~~ 487 (493)
.|++.++ |- |+.-|+.|+.++..+.+
T Consensus 637 ~I~l~~e-~WTPenGlvT~A~KLKRk~I~~~~k~ 669 (678)
T KOG1180|consen 637 KIVLSPE-PWTPENGLVTAALKLKRKEILAAYKK 669 (678)
T ss_pred eeEecCC-CcCCCccccHHHHHhhHHHHHHHHHH
Confidence 9988754 43 45569999999888765
No 116
>TIGR01733 AA-adenyl-dom amino acid adenylation domain. This domain is a subset of the AMP-binding domain found in Pfam (pfam00501) which also hits substrate--CoA ligases and luciferases. Sequences scoring in between trusted and noise for this model may be ambiguous as to whether they activate amino acids or other molecules lacking an alpha amino group.
Probab=100.00 E-value=9.1e-52 Score=410.91 Aligned_cols=383 Identities=21% Similarity=0.302 Sum_probs=322.2
Q ss_pred hHHHHHHhhCCCCCCCEEEEECCCCCCcHHHHHHHHHHcCCeeccCCCCCCHHHHHHHHhhcCCeEEEEcCCCcccCCCC
Q 011116 18 TLSHALSKRDSLCRKTTSLTSSPLPPSTSPVLYFSLLSLGVVISPANPLSSTSEVSHQIQLSKPSIAFATSHTSYKLPSN 97 (493)
Q Consensus 18 ~lA~~L~~~~gl~~gd~V~l~~~~~~~~~~~~~lA~~~~G~~~v~i~~~~~~~~l~~~l~~~~~~~il~~~~~~~~~~~~ 97 (493)
++|++|.++.|+++||+|+++++ |+++++++++||+++|++++|+++.++.+.+.+++++++++.++++++....+...
T Consensus 11 ~~a~~l~~~~g~~~gd~v~l~~~-n~~~~~~~~~a~~~~G~~~v~~~~~~~~~~~~~~l~~~~~~~ii~~~~~~~~~~~~ 89 (408)
T TIGR01733 11 RLARHLRAAGGVGPGDRVAVLLE-RSAELVVAILAVLKAGAAYVPLDPAYPAERLAFILEDAGARLLLTDSALASRLAGL 89 (408)
T ss_pred HHHHHHHHhhCCCCCCEEEEEeC-CCHHHHHHHHHHHHhCCEEEEcCCCCCHHHHHHHHHhcCCCEEEEcCchhhhcccc
Confidence 34999944389999999999999 99999999999999999999999999999999999999999999998877666543
Q ss_pred C-cEEEecCchhhhhhccCcccccccCCCCCCCCCCeEEEEccCCCCCCccceecchHHHHHHHHHhhhhcccCCCCCCC
Q 011116 98 L-RTILMDSPEFISLLNQNEDVADFANSNMTVYQSDPAAILYSSGTTGKVKGVLLSHLNVIAIIAGYYHVTEETDPNEGP 176 (493)
Q Consensus 98 ~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~TSGTTG~pK~v~~t~~~~~~~~~~~~~~~~~~~~~~~~ 176 (493)
. ....+.. .+........ ...........+++++++|||||||.||+|.++|.++..........+. +
T Consensus 90 ~~~~~~~~~-~~~~~~~~~~---~~~~~~~~~~~~~~~~i~~TSGTtG~pK~v~~s~~~~~~~~~~~~~~~~-------~ 158 (408)
T TIGR01733 90 VLPIILVDP-LELAALDDAP---APPPPDAPSGPDDLAYVIYTSGSTGRPKGVVVTHRSLVNLLAWLARRYG-------L 158 (408)
T ss_pred CCceEEech-hhhhhccccc---ccccccCCCCCCCcEEEEEcCCCCCCCCEEEeccHHHHHHHHHHHHhcC-------C
Confidence 2 2333322 1211111110 1011111245789999999999999999999999999988888777663 4
Q ss_pred CCCcEEEEecChhHHHHHHHHHHHHhcCCeEEEecCCC---HHHHHHHHHhcCeeecccChHHHHHHHhcccCCCCCCCC
Q 011116 177 PPHPVSFFTLPMFHVFGFFMLVRAASKGETLVFMERFD---FEKMLKAVENYRVTYMPVSPPLIVAFINSKLTDKYDLSS 253 (493)
Q Consensus 177 ~~~~~~~~~~pl~~~~g~~~~~~~l~~G~~~~~~~~~~---~~~~~~~l~~~~~t~l~~~P~~~~~l~~~~~~~~~~l~~ 253 (493)
.+++++++..|++|.+++..++.++..|+++++.+... +..+.+.++++++|.+.++|.+++.+.+... ..+++
T Consensus 159 ~~~~~~~~~~p~~~~~~~~~~~~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~t~l~~~p~~~~~l~~~~~---~~~~~ 235 (408)
T TIGR01733 159 DPDDRVLQFASLSFDASVEEIFGTLLAGATLVVPPEDEERDAALLAALIAEHPVTVLNLTPSLLALLAAALP---PALAS 235 (408)
T ss_pred CCCceEEEecCCccchhHHHHHHHHhCCCEEEEcChhhccCHHHHHHHHHHcCceEEEeCHHHHHHHHHhhh---hcccC
Confidence 78899999999999999999999999999999886543 6889999999999999999999999988764 55789
Q ss_pred eeEEEecCCCCCHHHHHHHHHhCCCCceeccccccccCCccccccCC-CCCC--CCCccccccCCceEEEEcCCCCccCC
Q 011116 254 LQLLGCGGAPLGKEVTLKFKEKFPNVEIRQGYGLTETGGAGSRVIGP-DEAE--RHGSVGRLAELMEAKIVDPATGEALP 330 (493)
Q Consensus 254 lr~v~~~Ge~~~~~~~~~~~~~~~~~~v~~~yG~tE~g~~~~~~~~~-~~~~--~~~~~g~p~~~~~~~i~d~~~~~~~~ 330 (493)
+|.++++|+++++++.+.+++.++++.+++.||+||++.++...... .... ...++|.|.++++++|+|++ ++.++
T Consensus 236 l~~v~~~g~~~~~~~~~~~~~~~~~~~i~~~YG~tE~g~~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~i~~~~-~~~~~ 314 (408)
T TIGR01733 236 LRLVILGGEALTPALVDRWRARGPGARLINLYGPTETTVWSTATLVDADDAPRESPVPIGRPLANTRLYVLDDD-LRPVP 314 (408)
T ss_pred ceEEEEeCccCCHHHHHHHHHhCCCcEEEecccCCceEEEEEEEEcCccccCCccccccCcccCCceEEEECCC-CCCCC
Confidence 99999999999999999999999559999999999998766532111 1111 26789999999999999965 88999
Q ss_pred CCCceEEEEeCccccccccCCcccccccccCC------C--eeeccceEEEcCCCcEEEEcccCCeEEeCceeeChHHHH
Q 011116 331 PGQKGELWLRGPTIMKGYVGDDKATSETVHSE------G--WLKTGDLCYFDSNGFLFIVDRLKELIKYKAYQVPPVELE 402 (493)
Q Consensus 331 ~g~~Gel~v~~~~~~~gy~~~~~~~~~~~~~~------~--~~~TgD~~~~~~~g~~~~~GR~~d~i~~~G~~i~~~~ie 402 (493)
.|+.|||+++|+.++.||+++++.+.+.|..+ + ||+|||+++++++|++++.||.+|+++.+|++++|.+||
T Consensus 315 ~g~~Gel~v~~~~~~~gy~~~~~~~~~~~~~~~~~~~~~~~~~~TGDl~~~d~~g~~~~~gR~~~~i~~~G~~v~~~~ie 394 (408)
T TIGR01733 315 VGVVGELYIGGPGVARGYLNRPELTAERFVPDPFAGGDGARLYRTGDLVRYLPDGNLEFLGRIDDQVKIRGYRIELGEIE 394 (408)
T ss_pred CCCceEEEecCccccccccCChhhhhcceeeCCCCCCCCceEEECCceEEEcCCCCEEEeeccCCEEEeCeEEechHHHH
Confidence 99999999999999999999998888776433 2 999999999999999999999999999999999999999
Q ss_pred HHHhcCCCcceEEE
Q 011116 403 HLLHSNPEIADAAV 416 (493)
Q Consensus 403 ~~l~~~~~v~~~~v 416 (493)
++|..+++|.+++|
T Consensus 395 ~~l~~~~~v~~~~v 408 (408)
T TIGR01733 395 AALLRHPGVREAVV 408 (408)
T ss_pred HHHhcCcchhhhcC
Confidence 99999999998764
No 117
>KOG1179 consensus Very long-chain acyl-CoA synthetase/fatty acid transporter [Lipid transport and metabolism]
Probab=100.00 E-value=6.2e-51 Score=382.40 Aligned_cols=462 Identities=23% Similarity=0.302 Sum_probs=375.0
Q ss_pred cchhhhHHHHHHhhCCCCCCCEEEEECCCCCCcHHHHHHHHHHcCCeeccCCCCCCHHHHHHHHhhcCCeEEEEcCCCcc
Q 011116 13 SSARFTLSHALSKRDSLCRKTTSLTSSPLPPSTSPVLYFSLLSLGVVISPANPLSSTSEVSHQIQLSKPSIAFATSHTSY 92 (493)
Q Consensus 13 ~~~~~~lA~~L~~~~gl~~gd~V~l~~~~~~~~~~~~~lA~~~~G~~~v~i~~~~~~~~l~~~l~~~~~~~il~~~~~~~ 92 (493)
+|+|+ |++| +..|++.||+||++|+ |.++|+.+||+++++|++...||++..-+.|.|.+..++++.++++++...
T Consensus 113 ~s~~~--A~~~-~~~~l~~GD~VAL~me-n~pefv~lWlGLaKlGv~tA~iNtNlR~~~LlHsi~~s~aralv~~~el~~ 188 (649)
T KOG1179|consen 113 RSNRV--ANYL-HAEGLKAGDVVALLME-NRPEFVALWLGLAKLGVITAFINTNLRGEPLLHSITVSGARALVVGPELLN 188 (649)
T ss_pred HHHHH--HHHH-HHhhcccCCEEEEecC-CChhHHHHHHhHHhhCceeeeeccccccchhhhhhhhcCceEEEECHHHHH
Confidence 36666 9999 8789999999999999 999999999999999999999999999999999999999999999987665
Q ss_pred cCCC--------CCcEEEecC----chhhhhhccCccccc---ccCCCCCCCCCCeEEEEccCCCCCCccceecchHHHH
Q 011116 93 KLPS--------NLRTILMDS----PEFISLLNQNEDVAD---FANSNMTVYQSDPAAILYSSGTTGKVKGVLLSHLNVI 157 (493)
Q Consensus 93 ~~~~--------~~~~~~~~~----~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~i~~TSGTTG~pK~v~~t~~~~~ 157 (493)
.+.+ .+....++. ....++...-..... +.......+-.+++..+|||||||.||+.+++|....
T Consensus 189 ~~~e~~~~l~~~~i~~~~~~~~~~~~g~~~L~~~l~~~~~~~vp~~~~~~~~~~s~~lyIYTSGTTGLPKaAvith~r~~ 268 (649)
T KOG1179|consen 189 ALEEILPLLIKNGIHVFSLGPTSVPDGIESLLAKLSAAPKHPVPVSTRSGLTFRSPLLYIYTSGTTGLPKAAVITHLRYL 268 (649)
T ss_pred HHHhcchhhhhccceEEecCCCCCCchHHHHHHhhcccccCCCCcccCCCccccceeEEEEcCCCCCCCHHHHHHHHHHH
Confidence 4332 233333331 123333333221111 1122334556789999999999999999999999998
Q ss_pred HHHHHhhhhcccCCCCCCCCCCcEEEEecChhHHHHH-HHHHHHHhcCCeEEEecCCCHHHHHHHHHhcCeeecccChHH
Q 011116 158 AIIAGYYHVTEETDPNEGPPPHPVSFFTLPMFHVFGF-FMLVRAASKGETLVFMERFDFEKMLKAVENYRVTYMPVSPPL 236 (493)
Q Consensus 158 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pl~~~~g~-~~~~~~l~~G~~~~~~~~~~~~~~~~~l~~~~~t~l~~~P~~ 236 (493)
.........+ |..+.|+++..+|++|+.+. ..+..|+..|+++++-..++..++|+.+.+|++|+..-.--+
T Consensus 269 ~~a~g~~~~~-------g~~~~DvvY~~lPLYHsaa~ilGi~~~l~~GaT~VlrkKFSAS~FW~DC~k~~~Tv~QYIGEl 341 (649)
T KOG1179|consen 269 QGAAGFYYVF-------GMTADDVVYTTLPLYHSAAGILGIGGCLLHGATVVLRKKFSASNFWDDCRKYNVTVIQYIGEL 341 (649)
T ss_pred HHHHHHHHHh-------CCCccceEEEcchhHHHHHHHHHHHHHHhcCceEEEecccchhhhHHHHHHhCCeeeehHHHH
Confidence 8888777777 45999999999999999998 789999999999999999999999999999999999999999
Q ss_pred HHHHHhcccCCCCCCCCeeEEEecCCCCCHHHHHHHHHhCCCCceeccccccccCCccccccCCCCCCCCCc-cccccCC
Q 011116 237 IVAFINSKLTDKYDLSSLQLLGCGGAPLGKEVTLKFKEKFPNVEIRQGYGLTETGGAGSRVIGPDEAERHGS-VGRLAEL 315 (493)
Q Consensus 237 ~~~l~~~~~~~~~~l~~lr~v~~~Ge~~~~~~~~~~~~~~~~~~v~~~yG~tE~g~~~~~~~~~~~~~~~~~-~g~p~~~ 315 (493)
.+.|++.+.....+-..+|..+ |..+.+++++.|.++|+-..|.+.||+||+..........-......+ ..+-+--
T Consensus 342 cRYLl~~p~~~~er~HkVRla~--GNGLR~diW~~Fv~RFg~~~IgE~YgaTEgn~~~~N~d~~vGA~G~~~~~~~~l~p 419 (649)
T KOG1179|consen 342 CRYLLNQPPSPEERQHKVRLAY--GNGLRPDIWQQFVKRFGIIKIGEFYGATEGNSNLVNYDGRVGACGFMSRLLKLLYP 419 (649)
T ss_pred HHHHHcCCCChhhcCceEEEEe--cCCCCchHHHHHHHHcCCCeEEEEeccccCcceeeeecCccccccchhhhhhhccc
Confidence 9999998877776677888888 999999999999999955669999999998765443222111111111 1111222
Q ss_pred ceEEEEcCCCCc----------cCCCCCceEEEEeC--c---cccccccCCcccccccc------cCCCeeeccceEEEc
Q 011116 316 MEAKIVDPATGE----------ALPPGQKGELWLRG--P---TIMKGYVGDDKATSETV------HSEGWLKTGDLCYFD 374 (493)
Q Consensus 316 ~~~~i~d~~~~~----------~~~~g~~Gel~v~~--~---~~~~gy~~~~~~~~~~~------~~~~~~~TgD~~~~~ 374 (493)
+++.=.|+++++ +|++||.|.|+-+= - .-+.||.++...+.+.. .+|-||.|||+-.+|
T Consensus 420 ~~LIk~D~~t~E~iRd~~G~Ci~~~~GEpGlLv~~i~~k~P~~~F~GY~g~~~~t~kKl~rDVFkkGD~~f~tGDlLv~D 499 (649)
T KOG1179|consen 420 FRLIKVDPETGEPIRDSQGLCIPCPPGEPGLLVGKIVQKNPLRSFLGYAGPKKATEKKLLRDVFKKGDVYFNTGDLLVAD 499 (649)
T ss_pred eEEEEecCCCCceeecCCceEEECCCCCCceEEEEeccCCchhhhccccCchhhhhhhhHHhhhccCcEEEeeCcEEEEe
Confidence 334445656665 46789999775432 2 23679998777666653 234599999999999
Q ss_pred CCCcEEEEcccCCeEEeCceeeChHHHHHHHhcCCCcceEEEEeeeCCC-CCeeEEEEEEeCCCCCCCHHHHHHHHHhcC
Q 011116 375 SNGFLFIVDRLKELIKYKAYQVPPVELEHLLHSNPEIADAAVIPYPDEE-AGQIPMAFVVRKPGSNITEAEIMDFIAKQV 453 (493)
Q Consensus 375 ~~g~~~~~GR~~d~i~~~G~~i~~~~ie~~l~~~~~v~~~~v~~~~~~~-~~~~~~~~v~~~~~~~~~~~~l~~~l~~~l 453 (493)
+.|++||.+|..|++.+.|++++..|+|+.|..+..+.|+.|.++.-+. .|+.-.|.+++.+..+.+.+.+-.++++.|
T Consensus 500 ~~GylYF~DRtGDTFRWKGENVsTtEVe~~l~~~~~~~dv~VYGV~VP~~EGRaGMAaI~~~p~~~~d~~~l~~~l~~~L 579 (649)
T KOG1179|consen 500 ELGYLYFKDRTGDTFRWKGENVSTTEVEDVLSALDFLQDVNVYGVTVPGYEGRAGMAAIVLDPTTEKDLEKLYQHLRENL 579 (649)
T ss_pred cCCcEEEeccCCCceeecCCcccHHHHHHHHhhhccccceeEEEEecCCccCccceEEEEecCcccchHHHHHHHHHhhC
Confidence 9999999999999999999999999999999999999999999997664 567778888889999999999999999999
Q ss_pred CCCCCcceEEEeccccCCCCCccchHHHHHHHhh
Q 011116 454 APYKKIRRVAFINSIPKSTAGKILRRELVTHAIS 487 (493)
Q Consensus 454 ~~~~~p~~~~~~~~lP~t~~GK~~r~~l~~~~~~ 487 (493)
|+|.+|..+-+.+++++|.|-|..+..|.++...
T Consensus 580 P~YA~P~FlRl~~~i~~TgTFKl~K~~L~~egf~ 613 (649)
T KOG1179|consen 580 PSYARPRFLRLQDEIEKTGTFKLQKTELQKEGFN 613 (649)
T ss_pred ccccchHHHHHHhhhhcccchhhHHHHHHHccCC
Confidence 9999999999999999999999999999887643
No 118
>PF00501 AMP-binding: AMP-binding enzyme; InterPro: IPR000873 A number of prokaryotic and eukaryotic enzymes, which appear to act via an ATP-dependent covalent binding of AMP to their substrate, share a region of sequence similarity [, , ]. This region is a Ser/Thr/Gly-rich domain that is further characterised by a conserved Pro-Lys-Gly triplet. The family of enzymes includes luciferase, long chain fatty acid Co-A ligase, acetyl-CoA synthetase and various other closely-related synthetases.; GO: 0003824 catalytic activity, 0008152 metabolic process; PDB: 2V7B_A 2Y4O_B 2VSQ_A 3L8C_B 1RY2_A 3KXW_A 3LNV_A 3ETC_B 3A9U_A 3A9V_A ....
Probab=100.00 E-value=3.5e-51 Score=407.79 Aligned_cols=361 Identities=33% Similarity=0.526 Sum_probs=291.0
Q ss_pred hHHHHHHhhCCCCCCCEEEEECCCCCCcHHHHHHHHHHcCCeeccCCCCCCHHHHHHHHhhcCCeEEEE----cCCCccc
Q 011116 18 TLSHALSKRDSLCRKTTSLTSSPLPPSTSPVLYFSLLSLGVVISPANPLSSTSEVSHQIQLSKPSIAFA----TSHTSYK 93 (493)
Q Consensus 18 ~lA~~L~~~~gl~~gd~V~l~~~~~~~~~~~~~lA~~~~G~~~v~i~~~~~~~~l~~~l~~~~~~~il~----~~~~~~~ 93 (493)
++|.+| .+.|+++||+|+++++ |+++++++++||+++|++++|++|.++.+++.+++++++++++++ +......
T Consensus 33 ~la~~L-~~~g~~~~~~V~i~~~-n~~~~~~~~~A~~~~G~~~v~l~~~~~~~~~~~~l~~~~~~~ii~~~~~d~~~~~~ 110 (417)
T PF00501_consen 33 KLAAAL-RKLGVKKGDRVAILLP-NSIEFVVAFLACLRAGAIPVPLDPSLSEDELRHILRQSGPKVIITSEAVDSEPLKK 110 (417)
T ss_dssp HHHHHH-HHTTSSTTSEEEEEES-SSHHHHHHHHHHHHTT-EEEEEETTSSHHHHHHHHHHHTESEEEECHHHSCHHHHH
T ss_pred HHhhHH-HHhCCCccccccccCC-ccceeeeeecccccccccccccccccccccccccccccceeEEEEecccccccccc
Confidence 359999 6889999999999999 999999999999999999999999999999999999999999998 1111111
Q ss_pred CC-------CCCcEEEecCchhh---hhhccCcccccccCCCCC-CCCCCeEEEEccCCCCCCccceecchHHHHHHHHH
Q 011116 94 LP-------SNLRTILMDSPEFI---SLLNQNEDVADFANSNMT-VYQSDPAAILYSSGTTGKVKGVLLSHLNVIAIIAG 162 (493)
Q Consensus 94 ~~-------~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~-~~~~~~~~i~~TSGTTG~pK~v~~t~~~~~~~~~~ 162 (493)
+. .....+.++...+. .+..... . ...... ..++++++++|||||||.||+|.++|+++.+.+..
T Consensus 111 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~-~~~~~~~~~~~~~~~i~~TSGTTG~pK~v~~t~~~~~~~~~~ 186 (417)
T PF00501_consen 111 LKSIFKQEDPSSSIIILDRDDLPKKEALKSASL---S-DEPQSPEDSPDDPAFILFTSGTTGKPKGVVLTHRNLLAQARA 186 (417)
T ss_dssp HHHHHTTSTTTEEEEEESHSSCTTCHHHHHHHH---C-HCSHSTTHTTTSEEEEEEESSSSSSEEEEEEEHHHHHHHHHH
T ss_pred chhhhcccccccccccccccccccccccccccc---c-cccccCCCCccceeEeeccccccccccccccccccccccccc
Confidence 11 11224444422211 1111110 0 000000 15799999999999999999999999999988777
Q ss_pred hh-hhcccCCCCCCCCCCcEEEEecChhHHHHH-HHHHHHHhcCCeEEEecCCC---HHHHHHHHHhcCeeecccChHHH
Q 011116 163 YY-HVTEETDPNEGPPPHPVSFFTLPMFHVFGF-FMLVRAASKGETLVFMERFD---FEKMLKAVENYRVTYMPVSPPLI 237 (493)
Q Consensus 163 ~~-~~~~~~~~~~~~~~~~~~~~~~pl~~~~g~-~~~~~~l~~G~~~~~~~~~~---~~~~~~~l~~~~~t~l~~~P~~~ 237 (493)
+. ... . +.+ +++++.+|++|.+++ ..++.+++.|+++++.+... ++.+++.++++++|++.++|+++
T Consensus 187 ~~~~~~-~-----~~~--d~~l~~~p~~~~~g~~~~~~~~l~~G~~~~~~~~~~~~~~~~~~~~i~~~~~t~~~~~p~~l 258 (417)
T PF00501_consen 187 LALPEY-F-----GLG--DRILSFLPLSHIFGLISALLAALFSGATLVLPSPFDLFDPESLLELISRYKPTILFAVPSML 258 (417)
T ss_dssp HHHHHT-T-----TTT--TEEEESS-TTSHHHHHHHHHHHHHCTSEEEEESSHHHHHHHHHHHHHHHHTESEEEEEHHHH
T ss_pred cccccc-c-----ccC--ceEEeeccccccccccccccccccccccccccccccccccccchhccccccccccccccccc
Confidence 54 111 1 112 699999999999999 89999999999999998654 47789999999999999999999
Q ss_pred HHHHhcccCC----CCCCCCeeEEEecCCCCCHHHHHHHHHhCCCCceeccccccccCCccccccCCCCCCCCCcccccc
Q 011116 238 VAFINSKLTD----KYDLSSLQLLGCGGAPLGKEVTLKFKEKFPNVEIRQGYGLTETGGAGSRVIGPDEAERHGSVGRLA 313 (493)
Q Consensus 238 ~~l~~~~~~~----~~~l~~lr~v~~~Ge~~~~~~~~~~~~~~~~~~v~~~yG~tE~g~~~~~~~~~~~~~~~~~~g~p~ 313 (493)
..+++..... ...++++|.++++|+++++++.+++++.++.+++++.||+||++.+++...........+++|.|+
T Consensus 259 ~~l~~~~~~~~~~~~~~l~~lr~v~~~G~~l~~~~~~~~~~~~~~~~i~~~YG~tE~~~~~~~~~~~~~~~~~~~~G~~~ 338 (417)
T PF00501_consen 259 EALLQSPEEKTKISKKDLSSLRTVISGGEPLPPDLLRRLRKAFGNAPIINLYGSTETGSIATIRPPEDDIEKPGSVGKPL 338 (417)
T ss_dssp HHHHHHHHTTHHGTTTTGTT-SEEEEESST-CHHHHHHHHHHHTTSEEEEEEEEGGGSSEEEEEETTTHHSSTTSEBEES
T ss_pred ccccccccccccccccccccccccccccccCChhhccccccccccccceecccccccceeeecccccccccccccccccc
Confidence 9999843232 346888999999999999999999999995559999999999999887533233334667899999
Q ss_pred CCceEEEEcCCCCccCCCCCceEEEEeCccccccccCCcccccccccCCCeeeccceEEEcCCCcEEEEcccCCeEEeC
Q 011116 314 ELMEAKIVDPATGEALPPGQKGELWLRGPTIMKGYVGDDKATSETVHSEGWLKTGDLCYFDSNGFLFIVDRLKELIKYK 392 (493)
Q Consensus 314 ~~~~~~i~d~~~~~~~~~g~~Gel~v~~~~~~~gy~~~~~~~~~~~~~~~~~~TgD~~~~~~~g~~~~~GR~~d~i~~~ 392 (493)
++++++|+|+++++++++|+.|||+++|+.++.||+++++.+.+.|..+|||+|||+|++++||++++.||.||+||+.
T Consensus 339 ~~~~~~ivd~~~~~~~~~g~~Gei~i~~~~~~~gy~~~~~~~~~~~~~~~~~~TGD~g~~d~~G~~~~~GR~~~~i~~~ 417 (417)
T PF00501_consen 339 PGVEVKIVDPNTGEPLPPGEPGEIVIRGPNVFSGYYNDPELTAEAFIDDGWYRTGDLGRLDEDGYLYILGRSDDMIKVR 417 (417)
T ss_dssp TTEEEEEECTTTSSBESTTSEEEEEEESTTSBSEETTBHHHHHHHEETTSEEEEEEEEEEETTSEEEEEEEGSCEEEET
T ss_pred cccccccccccccccccccccccccccCCccceeeeccccccccccccccceecceEEEECCCCeEEEEEeeCCEEEeC
Confidence 9999999998889999999999999999999999999999999988766899999999999999999999999999973
No 119
>PRK07824 O-succinylbenzoic acid--CoA ligase; Provisional
Probab=100.00 E-value=1.7e-48 Score=379.81 Aligned_cols=321 Identities=26% Similarity=0.390 Sum_probs=280.1
Q ss_pred CCCCCeEEEEccCCCCCCccceecchHHHHHHHHHhhhhcccCCCCCCCCCCcEEEEecChhHHHHHHHHHHHHhcCCeE
Q 011116 128 VYQSDPAAILYSSGTTGKVKGVLLSHLNVIAIIAGYYHVTEETDPNEGPPPHPVSFFTLPMFHVFGFFMLVRAASKGETL 207 (493)
Q Consensus 128 ~~~~~~~~i~~TSGTTG~pK~v~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pl~~~~g~~~~~~~l~~G~~~ 207 (493)
..++++++++|||||||.||+|.++|.++..........+ ...+.++...|++|..++..++.++..|++.
T Consensus 32 ~~~~d~a~il~TSGTTG~PKgv~~s~~~l~~~~~~~~~~~---------~~~~~~~~~~p~~~~~g~~~~~~~l~~g~~~ 102 (358)
T PRK07824 32 PIDDDVALVVATSGTTGTPKGAMLTAAALTASADATHDRL---------GGPGQWLLALPAHHIAGLQVLVRSVIAGSEP 102 (358)
T ss_pred CCCCCeEEEEeCCCCCCCCCEEEecHHHHHHHHHHHHhcc---------CCCCeEEEECChHHHHHHHHHHHHHHcCCeE
Confidence 4468999999999999999999999999988777654443 3456889999999999998888899999998
Q ss_pred EEe---cCCCHHHHHHHHHhcC--eeecccChHHHHHHHhcccCCCCCCCCeeEEEecCCCCCHHHHHHHHHhCCCCcee
Q 011116 208 VFM---ERFDFEKMLKAVENYR--VTYMPVSPPLIVAFINSKLTDKYDLSSLQLLGCGGAPLGKEVTLKFKEKFPNVEIR 282 (493)
Q Consensus 208 ~~~---~~~~~~~~~~~l~~~~--~t~l~~~P~~~~~l~~~~~~~~~~l~~lr~v~~~Ge~~~~~~~~~~~~~~~~~~v~ 282 (493)
++. ..+++..+++.+++++ .++...+|..+..++.... ....++++|.+++||+++++++.+++.+. +++++
T Consensus 103 v~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~p~~l~~~~~~~~-~~~~~~~l~~i~~gG~~l~~~~~~~~~~~--~~~v~ 179 (358)
T PRK07824 103 VELDVSAGFDPTALPRAVAELGGGRRYTSLVPMQLAKALDDPA-ATAALAELDAVLVGGGPAPAPVLDAAAAA--GINVV 179 (358)
T ss_pred EecCcCCCcCHHHHHHHHHHhCCCceEEEecHHHHHHHHhCcc-ccCCcccceEEEECCCCCCHHHHHHHHhc--CCcEE
Confidence 873 4578999999999998 5667778888877766543 23457899999999999999999998864 89999
Q ss_pred ccccccccCCccccccCCCCCCCCCccccccCCceEEEEcCCCCccCCCCCceEEEEeCccccccccCCcccccccccCC
Q 011116 283 QGYGLTETGGAGSRVIGPDEAERHGSVGRLAELMEAKIVDPATGEALPPGQKGELWLRGPTIMKGYVGDDKATSETVHSE 362 (493)
Q Consensus 283 ~~yG~tE~g~~~~~~~~~~~~~~~~~~g~p~~~~~~~i~d~~~~~~~~~g~~Gel~v~~~~~~~gy~~~~~~~~~~~~~~ 362 (493)
+.||+||++..+. ..|.|.+++++++.+ |||+++|+.++.||+++++.. .+..+
T Consensus 180 ~~YG~TE~~~~~~------------~~G~~~~g~~v~i~~------------Gei~v~g~~~~~gY~~~~~~~--~~~~~ 233 (358)
T PRK07824 180 RTYGMSETSGGCV------------YDGVPLDGVRVRVED------------GRIALGGPTLAKGYRNPVDPD--PFAEP 233 (358)
T ss_pred ecccCCccCCCcC------------cCceeCCCCEEEecC------------CEEEEecCccccccCCCcccc--cccCC
Confidence 9999999875321 247899999999854 999999999999999988644 34457
Q ss_pred CeeeccceEEEcCCCcEEEEcccCCeEEeCceeeChHHHHHHHhcCCCcceEEEEeeeCCCCCeeEEEEEEeCCCCCCCH
Q 011116 363 GWLKTGDLCYFDSNGFLFIVDRLKELIKYKAYQVPPVELEHLLHSNPEIADAAVIPYPDEEAGQIPMAFVVRKPGSNITE 442 (493)
Q Consensus 363 ~~~~TgD~~~~~~~g~~~~~GR~~d~i~~~G~~i~~~~ie~~l~~~~~v~~~~v~~~~~~~~~~~~~~~v~~~~~~~~~~ 442 (493)
+||+|||++++ ++|.+++.||.||+||.+|++|+|.+||.+|.++|+|.+++|++.+++..++.++++++...+.....
T Consensus 234 g~~~TGDl~~~-~~g~l~i~GR~~d~i~~~G~~v~p~eIE~~l~~~~~V~~~~vv~~~~~~~g~~~~a~v~~~~~~~~~~ 312 (358)
T PRK07824 234 GWFRTDDLGAL-DDGVLTVLGRADDAISTGGLTVLPQVVEAALATHPAVADCAVFGLPDDRLGQRVVAAVVGDGGPAPTL 312 (358)
T ss_pred CceecccEEEE-eCCEEEEEeccCCeEEECCEEECHHHHHHHHHhCCCcceEEEEecCCCCCceEEEEEEEeCCCCCcCH
Confidence 89999999999 89999999999999999999999999999999999999999999998888899999998877667888
Q ss_pred HHHHHHHHhcCCCCCCcceEEEeccccCCCCCccchHHHHHHHhh
Q 011116 443 AEIMDFIAKQVAPYKKIRRVAFINSIPKSTAGKILRRELVTHAIS 487 (493)
Q Consensus 443 ~~l~~~l~~~l~~~~~p~~~~~~~~lP~t~~GK~~r~~l~~~~~~ 487 (493)
++++++++++++.+++|..++++++||+|++||++|+.|++++.+
T Consensus 313 ~~i~~~~~~~l~~~~~P~~i~~v~~lP~t~~GKi~r~~L~~~~~~ 357 (358)
T PRK07824 313 EALRAHVARTLDRTAAPRELHVVDELPRRGIGKVDRRALVRRFAG 357 (358)
T ss_pred HHHHHHHHhhCccccCCCEEEEecCCCCCCCccccHHHHHHHhhc
Confidence 999999999999999999999999999999999999999999865
No 120
>PTZ00297 pantothenate kinase; Provisional
Probab=100.00 E-value=8.5e-40 Score=354.15 Aligned_cols=419 Identities=13% Similarity=0.065 Sum_probs=303.5
Q ss_pred hHHHHHHhhCCCCCCCEEEEECCCCCCcHHHHHHHHHHcCCeeccCCCCCCHHHHHHHHhhcCCeEEEEcCCCcccCCC-
Q 011116 18 TLSHALSKRDSLCRKTTSLTSSPLPPSTSPVLYFSLLSLGVVISPANPLSSTSEVSHQIQLSKPSIAFATSHTSYKLPS- 96 (493)
Q Consensus 18 ~lA~~L~~~~gl~~gd~V~l~~~~~~~~~~~~~lA~~~~G~~~v~i~~~~~~~~l~~~l~~~~~~~il~~~~~~~~~~~- 96 (493)
++|++| .+.|+++||+|+++++ |+++|+++++||+++|++++|+++ +.+++.+++++++++++|++.+....+.+
T Consensus 469 ~lAa~L-~~lGV~~GDrVaIls~-N~~Ewvia~lA~~~~GaV~VPly~--t~~eL~yIL~~S~akvVfv~~~~l~kl~~i 544 (1452)
T PTZ00297 469 ELGSGL-LALGVRPGDVIGVDCE-ASRNIVILEVACALYGFTTLPLVG--KGSTMRTLIDEHKIKVVFADRNSVAAILTC 544 (1452)
T ss_pred HHHHHH-HHcCCCCCCEEEEEcC-CCHHHHHHHHHHHHcCCEEEeCCC--CHHHHHHHHHhcCCcEEEEchhHHHHHHhh
Confidence 459999 8899999999999999 999999999999999999999975 46789999999999999998765554322
Q ss_pred ---CCc-EEEecCc-----------------hhhhhhccCcccccccCCCCCCCCCCeEEEEc---cCCCCCCccceecc
Q 011116 97 ---NLR-TILMDSP-----------------EFISLLNQNEDVADFANSNMTVYQSDPAAILY---SSGTTGKVKGVLLS 152 (493)
Q Consensus 97 ---~~~-~~~~~~~-----------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~---TSGTTG~pK~v~~t 152 (493)
.++ ++.+++. .|.++...... ..........++|++.++| ||||||.||||++|
T Consensus 545 ~~~~Lr~IIv~d~~~~~~~~~~~~~~~i~~~s~~~ll~~G~~--~~~~~~~~~~~dDlatIiYtSyTSGTTG~PKGVmLT 622 (1452)
T PTZ00297 545 RSRKLETVVYTHSFYDEDDHAVARDLNITLIPYEFVEQKGRL--CPVPLKEHVTTDTVFTYVVDNTTSASGDGLAVVRVT 622 (1452)
T ss_pred cccCCcEEEEECCCcccccccccccCCcceeeHHHHHhcCcc--cCccccCCCCcccEEEEEecCCCCCCCcCCcEEEEe
Confidence 233 4444320 14444433211 0111122346788999985 99999999999999
Q ss_pred hHHHHHHHHHhhhhcccCCCCCCCCCCcEEEEecChhHHHHHHHHHHHHhcCCeEEEecCCCHHHHHHHHHhcCeeeccc
Q 011116 153 HLNVIAIIAGYYHVTEETDPNEGPPPHPVSFFTLPMFHVFGFFMLVRAASKGETLVFMERFDFEKMLKAVENYRVTYMPV 232 (493)
Q Consensus 153 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pl~~~~g~~~~~~~l~~G~~~~~~~~~~~~~~~~~l~~~~~t~l~~ 232 (493)
|+++..++......... ....++|++++.+|++|+++....+.++..|+++.. .+++.+++.+++++||++.+
T Consensus 623 H~Nlla~~~~~~~~~~~----~~~~~~D~~Ls~LPLaHI~er~~~~~~l~~G~~I~~---~d~~~lledL~~~rPTv~~~ 695 (1452)
T PTZ00297 623 HADVLRDISTLVMTGVL----PSSFKKHLMVHFTPFAMLFNRVFVLGLFAHGSAVAT---VDAAHLQRAFVKFQPTILVA 695 (1452)
T ss_pred HHHHHHHHHHHhhhccc----cCCCCCCEEEEechHHHHHHHHHHHHHHHcCCEEEe---CCHHHHHHHHHHHCCEEEEe
Confidence 99999988876543211 012578999999999999998777888999999874 35899999999999999999
Q ss_pred ChHHHHHHHhcccCC-------------------------CCC-----------------CCCeeEEEecCC--CCCHHH
Q 011116 233 SPPLIVAFINSKLTD-------------------------KYD-----------------LSSLQLLGCGGA--PLGKEV 268 (493)
Q Consensus 233 ~P~~~~~l~~~~~~~-------------------------~~~-----------------l~~lr~v~~~Ge--~~~~~~ 268 (493)
+|.++..+....... +.. -..+|.+++||. +++..+
T Consensus 696 VPrv~ekI~~~i~~~~~~~~~~~~~lf~~A~~~k~~~~~~g~~~~~l~d~LVf~kir~~lGGrlr~~isGga~~~l~~~l 775 (1452)
T PTZ00297 696 APSLFSTSRLQLSRANERYSAVYSWLFERAFQLRSRLINIHRRDSSLLRFIFFRATQELLGGCVEKIVLCVSEESTSFSL 775 (1452)
T ss_pred cHHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHHHHHHhcCCCCcHHHHHHHHHHHHHHhcCCeEEEEECCCccccChHH
Confidence 999998775532110 000 046888888873 444333
Q ss_pred HHHHHHhCCCCceeccccccccCCccccccCCCCCCCCCccccccCCceEEEEcCCCCccCCCCCceEEEEeCccccccc
Q 011116 269 TLKFKEKFPNVEIRQGYGLTETGGAGSRVIGPDEAERHGSVGRLAELMEAKIVDPATGEALPPGQKGELWLRGPTIMKGY 348 (493)
Q Consensus 269 ~~~~~~~~~~~~v~~~yG~tE~g~~~~~~~~~~~~~~~~~~g~p~~~~~~~i~d~~~~~~~~~g~~Gel~v~~~~~~~gy 348 (493)
.. +++++..||.||+. +. ... .... ..|.|+|+++++|.+.++... .+..|||+++ |
T Consensus 776 -----~~--~i~i~~g~glTE~~---~~-~~~-~~~~--~~G~PlpgvEvKI~~~~E~~~--~~~~GEIlvr-------~ 832 (1452)
T PTZ00297 776 -----LE--HISVCYVPCLREVF---FL-PSE-GVFC--VDGTPAPSLQVDLEPFDEPSD--GAGIGQLVLA-------K 832 (1452)
T ss_pred -----hC--CceEEEecceEEee---ee-cCC-CCcc--cCCeecCceEEEEcccccccC--CCCCCeEEEE-------E
Confidence 23 56788899999953 11 121 1112 239999999999987322111 1246999996 3
Q ss_pred cCCcccccccccCCCeeeccceEEEcCCCcEEEEcccCCeEEe-CceeeChHHHHHHHhcCCCcceEEEEeeeCCCCCee
Q 011116 349 VGDDKATSETVHSEGWLKTGDLCYFDSNGFLFIVDRLKELIKY-KAYQVPPVELEHLLHSNPEIADAAVIPYPDEEAGQI 427 (493)
Q Consensus 349 ~~~~~~~~~~~~~~~~~~TgD~~~~~~~g~~~~~GR~~d~i~~-~G~~i~~~~ie~~l~~~~~v~~~~v~~~~~~~~~~~ 427 (493)
.++++.|.+.+ ++| ++||++++.||++|+||+ +|++|.|+.||+.+.++|.|.+++|++.... .
T Consensus 833 ~kdpe~T~e~~--~gW---------~~dG~L~IidRkKdlikls~GEyVaP~~IE~~l~~sp~I~qi~V~Gd~~k----~ 897 (1452)
T PTZ00297 833 KGEPRRTLPIA--AQW---------KRDRTLRLLGPPLGILLPVAYEYVIAAELERIFSQSRYVNDIFLYADPSR----P 897 (1452)
T ss_pred CCChHHHHHhh--CcC---------ccCCeEEEEeccccceECCCCcEEcHHHHHHHHhcCCCccEEEEEecCCC----c
Confidence 47787777632 344 479999999999999999 8999999999999999999999999986543 2
Q ss_pred EEEEEEeCCCCC-------------------CCHHH--------HHHHH---H--hcCCCCCCcceEEEec-cc-----c
Q 011116 428 PMAFVVRKPGSN-------------------ITEAE--------IMDFI---A--KQVAPYKKIRRVAFIN-SI-----P 469 (493)
Q Consensus 428 ~~~~v~~~~~~~-------------------~~~~~--------l~~~l---~--~~l~~~~~p~~~~~~~-~l-----P 469 (493)
++++|++....- .+..+ +++.+ . +++..+.+++.+.+++ ++ -
T Consensus 898 lvALVvpd~e~l~~~wa~~~gi~~~~~~~~~~~~~el~~~~~~~v~~~i~~V~~~n~l~~~ei~k~~~Ll~~~Ft~enGl 977 (1452)
T PTZ00297 898 IIAIVSPNRDTVEFEWRQSHCMGEGGGPARQLGWTELVAYASSLLTADFACIAKENGLHPSNVPEYVHLHPHAFKDHSTF 977 (1452)
T ss_pred eEEEEEeCHHHHHHHHHHHcCCCccccccccCCHHHHHHhHHHHHHHHHHHHHHHhCcCccceeeEEEEeCCCCCCCCCc
Confidence 788888753210 01122 22222 1 1356677888776653 44 4
Q ss_pred CCCCCccchHHHHHHHhh
Q 011116 470 KSTAGKILRRELVTHAIS 487 (493)
Q Consensus 470 ~t~~GK~~r~~l~~~~~~ 487 (493)
+|++.|+.|+.+.+.+.+
T Consensus 978 LTPTlKlKR~~I~~kY~~ 995 (1452)
T PTZ00297 978 LTPYGKIRRDAVHSYFSS 995 (1452)
T ss_pred CChhhhhhHHHHHHHHHH
Confidence 799999999999998865
No 121
>TIGR02372 4_coum_CoA_lig 4-coumarate--CoA ligase, photoactive yellow protein activation family. Ectothiorhodospira halophila. This enzyme is designated 6.2.1.12 and therefore joins a number of plant enzymes linked to lignin biosynthesis and given similar names.
Probab=100.00 E-value=7.7e-40 Score=317.14 Aligned_cols=291 Identities=22% Similarity=0.277 Sum_probs=232.0
Q ss_pred CCCCeEEEEccCCCCCCccceecchHHHHHHHHHhhhhcccCCCCCCCCCCcEEEEecChhHHHHH-HHHHHHHhcCCeE
Q 011116 129 YQSDPAAILYSSGTTGKVKGVLLSHLNVIAIIAGYYHVTEETDPNEGPPPHPVSFFTLPMFHVFGF-FMLVRAASKGETL 207 (493)
Q Consensus 129 ~~~~~~~i~~TSGTTG~pK~v~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pl~~~~g~-~~~~~~l~~G~~~ 207 (493)
..+..++++|||||||.||+|.++|.++..........+.. ...+.+++++.+|++|.+++ +.++.++..|+++
T Consensus 93 ~~~~~~~i~~TSGTTG~PKgV~~sh~~l~~~~~~~~~~~~~-----~~~~~dr~l~~~Pl~h~~g~~~~~l~~l~~G~~v 167 (386)
T TIGR02372 93 STPTARFTFATSGSTGTPKPVTHSWAALLSEAQAIAKILGE-----RPPPVRRVISCVPAHHLYGFLFSCLLPSRRGLEA 167 (386)
T ss_pred CCCCceEEEECCCCCCCCceeEeeHHHHHHHHHHHHHHhCc-----CCCCCCeEEEeCCcHHHHHHHHHHHHHHHCCCeE
Confidence 34668899999999999999999999998877766665532 11344689999999999887 5678889999999
Q ss_pred EEecCCCHHHHHHHHHhcCeeecccChHHHHHHHhcccCCCCCCCCeeEEEecCCCCCHHHHHHHHHhCCCCceeccccc
Q 011116 208 VFMERFDFEKMLKAVENYRVTYMPVSPPLIVAFINSKLTDKYDLSSLQLLGCGGAPLGKEVTLKFKEKFPNVEIRQGYGL 287 (493)
Q Consensus 208 ~~~~~~~~~~~~~~l~~~~~t~l~~~P~~~~~l~~~~~~~~~~l~~lr~v~~~Ge~~~~~~~~~~~~~~~~~~v~~~yG~ 287 (493)
++...+++..+++.++.+ +++.++|++++.+.+.. ..+++++. +++|+++++++++.+++.. ...+++.||+
T Consensus 168 v~~~~~~~~~~l~~i~~~--t~~~~~P~~l~~l~~~~----~~l~slr~-i~gGa~l~~~l~~~~~~~g-~~~v~~~YG~ 239 (386)
T TIGR02372 168 KQLAAAPASGIMRHARPG--DLIVGTPFIWEQLADLD----YRLPGVVG-VSSGAPSTAATWRCLLAAG-LARLLEVYGA 239 (386)
T ss_pred EecCCCChHHHHHhhccC--CEEEECcHHHHHHHhhC----cCCCccee-EecCCCCCHHHHHHHHHhc-ccchhheecc
Confidence 998888888888887654 88999999999997643 34566775 6789999999999998862 3469999999
Q ss_pred cccCCccccccCCCCCCCCCccccccCCceEEEEcCCCCccCCCCCceEEEEeCccccccccCCcccccccccCCCeeec
Q 011116 288 TETGGAGSRVIGPDEAERHGSVGRLAELMEAKIVDPATGEALPPGQKGELWLRGPTIMKGYVGDDKATSETVHSEGWLKT 367 (493)
Q Consensus 288 tE~g~~~~~~~~~~~~~~~~~~g~p~~~~~~~i~d~~~~~~~~~g~~Gel~v~~~~~~~gy~~~~~~~~~~~~~~~~~~T 367 (493)
||++++.+.. .....+++.|+.++.+ +++.. .| ...|++|
T Consensus 240 TEt~~i~~~~-------~~~~~~~~~p~~~~~~---~~~~~-----------~g-------------------~~~~~~t 279 (386)
T TIGR02372 240 TETGGIGLRE-------APDDPFRLLPDLACFA---DTLSS-----------AG-------------------LARRLDL 279 (386)
T ss_pred cccccccccc-------CCCCCcccCCCccccC---CCccC-----------CC-------------------ccceeec
Confidence 9998755431 1223456777665533 11110 01 1236889
Q ss_pred cceEEEcCCCcEEEEcccCCeEEeCceeeChHHHHHHHhcCCCcceEEEEeeeCCCCCeeEEEEEEeCCCCCCC--HHHH
Q 011116 368 GDLCYFDSNGFLFIVDRLKELIKYKAYQVPPVELEHLLHSNPEIADAAVIPYPDEEAGQIPMAFVVRKPGSNIT--EAEI 445 (493)
Q Consensus 368 gD~~~~~~~g~~~~~GR~~d~i~~~G~~i~~~~ie~~l~~~~~v~~~~v~~~~~~~~~~~~~~~v~~~~~~~~~--~~~l 445 (493)
||+++++++|.+++.||.||+||++|++|+|.+||++|.++|+|.++++.. .++.+.+++++.++...+ .+++
T Consensus 280 gD~g~~d~~G~l~i~GR~dd~Ik~~G~~V~p~eIE~~l~~~p~V~~~~v~~-----~g~~~~a~vv~~~~~~~~~~~~~l 354 (386)
T TIGR02372 280 QDRLAWDKDGGFTILGRKDEILQVGGVNVSPGHVRDILERNPRVRAAAVRL-----DGRRLKAFIVVAEDADEAELEIEL 354 (386)
T ss_pred CceEEEcCCCcEEEecccCCEEEECCEEEcHHHHHHHHHcCCCceEEEEEc-----CCceEEEEEEECCCCChHHHHHHH
Confidence 999999999999999999999999999999999999999999999998862 356788888887653332 4688
Q ss_pred HHHHHhcCCCCCCcceEEEeccccCCCCCccc
Q 011116 446 MDFIAKQVAPYKKIRRVAFINSIPKSTAGKIL 477 (493)
Q Consensus 446 ~~~l~~~l~~~~~p~~~~~~~~lP~t~~GK~~ 477 (493)
+++++++++++++|..+.+++++|+|++||++
T Consensus 355 ~~~~~~~L~~~~~P~~i~~~~~lP~t~~GKi~ 386 (386)
T TIGR02372 355 RATAARHLPAPARPDRFRFGTELPRTGAGKLA 386 (386)
T ss_pred HHHHHHhCCCCCCCcEEEEcccCCCCCCCCcC
Confidence 99999999999999999999999999999984
No 122
>TIGR02155 PA_CoA_ligase phenylacetate-CoA ligase. Phenylacetate-CoA ligase (PA-CoA ligase) catalyzes the first step in aromatic catabolism of phenylacetic acid (PA) into phenylacetyl-CoA (PA-CoA). Often located in a conserved gene cluster with enzymes involved in phenylacetic acid activation (paaG/H/I/J), phenylacetate-CoA ligase has been found among the proteobacteria as well as in gram positive prokaryotes. In the B-subclass proteobacterium Azoarcus evansii, phenylacetate-CoA ligase has been shown to be induced under aerobic and anaerobic growth conditions. It remains unclear however, whether this induction is due to the same enzyme or to another isoenzyme restricted to specific anaerobic growth conditions.
Probab=100.00 E-value=2.3e-38 Score=314.67 Aligned_cols=326 Identities=22% Similarity=0.251 Sum_probs=242.5
Q ss_pred CCCCCeEEEEccCCCCCCccceecchHHHHHHHHHhhhhcccCCCCCCCCCCcEEEEecChhHHHH-HHHHHHHHhcCCe
Q 011116 128 VYQSDPAAILYSSGTTGKVKGVLLSHLNVIAIIAGYYHVTEETDPNEGPPPHPVSFFTLPMFHVFG-FFMLVRAASKGET 206 (493)
Q Consensus 128 ~~~~~~~~i~~TSGTTG~pK~v~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pl~~~~g-~~~~~~~l~~G~~ 206 (493)
.+.++++.+++||||||.||++.++|.++..+.......+.. .+..++|++++..+..+..+ +...+.++..|++
T Consensus 72 ~~~~~~~~~~~TSGTTG~Pk~v~~t~~~~~~~~~~~~~~~~~----~g~~~~d~~~~~~~~~~~~~~~~~~~~~~~~g~~ 147 (422)
T TIGR02155 72 VPREQVVRIHASSGTTGKPTVVGYTQNDIDTWSSVVARSIRA----AGGRPGDLIHNAYGYGLFTGGLGAHYGAEKLGCT 147 (422)
T ss_pred CChHHcEEEEECCCCCCCCeEeccCHHHHHHHHHHHHHHHHH----cCCCCCcEEEEccCccccchhHHHHHHHHHcCcE
Confidence 345678899999999999999999999987765543333211 24578899888766544333 3345667888999
Q ss_pred EEEecCCCHHHHHHHHHhcCeeecccChHHHHHHHhcccCCCCC--CCCeeEEEecCCCCCHHHHHHHHHhCCCCceecc
Q 011116 207 LVFMERFDFEKMLKAVENYRVTYMPVSPPLIVAFINSKLTDKYD--LSSLQLLGCGGAPLGKEVTLKFKEKFPNVEIRQG 284 (493)
Q Consensus 207 ~~~~~~~~~~~~~~~l~~~~~t~l~~~P~~~~~l~~~~~~~~~~--l~~lr~v~~~Ge~~~~~~~~~~~~~~~~~~v~~~ 284 (493)
++..+..+++.+++.|++++|+++.++|+++..|++.....+.. ..++|.++++||++++++.+.+++.| ++++++.
T Consensus 148 ~~~~~~~~~~~~~~~i~~~~~t~l~~~Ps~l~~L~~~~~~~~~~~~~~~lr~i~~~ge~l~~~~~~~i~~~~-g~~v~~~ 226 (422)
T TIGR02155 148 VVPISGGQTEKQVQLIQDFKPDIIMVTPSYMLNLLEELKRMGIDPAQTSLQVGIFGAEPWTNAMRKEIEARL-GMKATDI 226 (422)
T ss_pred EEecCCCCHHHHHHHHHHHCCCEEEEcHHHHHHHHHHHHHcCCCcccCceEEEEEeCCcCCHHHHHHHHHHh-CCceEec
Confidence 98877667899999999999999999999999998765443322 35899999999999999999999999 8999999
Q ss_pred ccccccCCccccccCCCCCCCCCccccccCCceEEEEcCCCCccCCCCCceEEEEeCccccccccCCcccccccccCCCe
Q 011116 285 YGLTETGGAGSRVIGPDEAERHGSVGRLAELMEAKIVDPATGEALPPGQKGELWLRGPTIMKGYVGDDKATSETVHSEGW 364 (493)
Q Consensus 285 yG~tE~g~~~~~~~~~~~~~~~~~~g~p~~~~~~~i~d~~~~~~~~~g~~Gel~v~~~~~~~gy~~~~~~~~~~~~~~~~ 364 (493)
||+||+++......... .......+.+...++|+|+++++++++|+.|||++++.. ...+ +.+|
T Consensus 227 YG~tE~~~~~~~~~~~~---~~~g~~~~~~~~~~eivd~~~g~~v~~Ge~Gelvvt~~~------------~~~~-p~~r 290 (422)
T TIGR02155 227 YGLSEVIGPGVAMECVE---TQDGLHIWEDHFYPEIIDPHTGEVLPDGEEGELVFTTLT------------KEAL-PVIR 290 (422)
T ss_pred ccchhhcCCceeecccc---cCCCceEecCeeEEEEECCCCCCCCCCCCeeEEEEecCC------------cccc-ceee
Confidence 99999853211111110 111122233567888999889999999999999999642 1222 4579
Q ss_pred eeccceEEEcCC-C-----cEEEEcccCCeEEeCceeeChHHHHHHHhcCCCcc-eEEEEeeeCCCCCeeEEEEEEeCCC
Q 011116 365 LKTGDLCYFDSN-G-----FLFIVDRLKELIKYKAYQVPPVELEHLLHSNPEIA-DAAVIPYPDEEAGQIPMAFVVRKPG 437 (493)
Q Consensus 365 ~~TgD~~~~~~~-g-----~~~~~GR~~d~i~~~G~~i~~~~ie~~l~~~~~v~-~~~v~~~~~~~~~~~~~~~v~~~~~ 437 (493)
|+|||+++++++ | .+++.||.+|+|+++|.+|+|.+||.+|.++|+|. .+++. .......+.+.+.++..++
T Consensus 291 y~TGDl~~~~~~~Gr~~~~~~~i~GR~~d~i~~~G~~v~p~eie~~l~~~~~v~~~~q~~-~~~~~~~~~~~~~v~~~~~ 369 (422)
T TIGR02155 291 YRTRDLTRLLPGTARTMRRMDRITGRSDDMLIIRGVNVFPTQLEEVILKMDELSPHYQLE-LTRNGHMDELTLKVELKPE 369 (422)
T ss_pred EEcCcEEEEECCCCCcccccccccCccCCeEEECCEEECHHHHHHHHHhCcCcCCCEEEE-EEcCCCccEEEEEEEEecC
Confidence 999999999876 4 46899999999999999999999999999999998 45544 4444444566777776543
Q ss_pred CCC-C--------HHHHHHHHHhcCCCCCCcceEEEe--ccccCCCCCccchH
Q 011116 438 SNI-T--------EAEIMDFIAKQVAPYKKIRRVAFI--NSIPKSTAGKILRR 479 (493)
Q Consensus 438 ~~~-~--------~~~l~~~l~~~l~~~~~p~~~~~~--~~lP~t~~GK~~r~ 479 (493)
... . .++|.+++++++..+. .|.++ ++||+|+ ||+.|.
T Consensus 370 ~~~~~~~~~~~~~~~~i~~~~~~~~~~~~---~v~~~~~~~lp~~~-GK~~~~ 418 (422)
T TIGR02155 370 SYTLRLHEQASLLAGEIQHTIKQEVGVSM---DVHLVEPGSLPRSE-GKARRV 418 (422)
T ss_pred cccccchHHHHHHHHHHHHHHHhccCcEE---EEEEECCCCccCCC-CCceEE
Confidence 211 1 3567777777776553 34444 7999987 999774
No 123
>COG1020 EntF Non-ribosomal peptide synthetase modules and related proteins [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=100.00 E-value=1.4e-36 Score=318.93 Aligned_cols=372 Identities=20% Similarity=0.245 Sum_probs=307.3
Q ss_pred HHHHHHhhCCCCCCCEEEEECCCCCCcHHHHHHHHHHcCCeeccCCCCCCHHHHHHHHhhcCCeEEEEcCCCcccCCCCC
Q 011116 19 LSHALSKRDSLCRKTTSLTSSPLPPSTSPVLYFSLLSLGVVISPANPLSSTSEVSHQIQLSKPSIAFATSHTSYKLPSNL 98 (493)
Q Consensus 19 lA~~L~~~~gl~~gd~V~l~~~~~~~~~~~~~lA~~~~G~~~v~i~~~~~~~~l~~~l~~~~~~~il~~~~~~~~~~~~~ 98 (493)
+|+.| .+.|++++++|+++.+ +++++++.++|++++|+.++|+++.++.+.+..+++.+++..++++.+....... .
T Consensus 265 la~~l-~~~g~~~~~~V~i~~~-rs~~~i~~~l~ilkaG~~yvP~d~~~P~~r~~~~l~~~~~~~~~~~~~~~~~~~~-~ 341 (642)
T COG1020 265 LARLL-ISLGVGPGETVAILAD-RSLELVVALLAVLKAGAAYVPLDPLYPAERLAYILEDSRPTLLLTQAHLRVDDVG-L 341 (642)
T ss_pred HHHHH-HHcCCCCCCeEEEEcC-CCHHHHHHHHHHHhcCCeEecCCCCChHHHHHHHHhhcCccEEEecccccccccc-C
Confidence 69999 8889999999999999 8999999999999999999999999999999999999999999999433321111 1
Q ss_pred cEEEecCchhhhhhccCcccccccCCCCCCCCCCeEEEEccCCCCCCccceecchHHHHHHHHHhhhhcccCCCCCCCCC
Q 011116 99 RTILMDSPEFISLLNQNEDVADFANSNMTVYQSDPAAILYSSGTTGKVKGVLLSHLNVIAIIAGYYHVTEETDPNEGPPP 178 (493)
Q Consensus 99 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~TSGTTG~pK~v~~t~~~~~~~~~~~~~~~~~~~~~~~~~~ 178 (493)
..+.++...+. .... ........+++.+|++|||||||.||||..+|++......+..+.+. ...
T Consensus 342 ~~~~~~~~~~~--~~~~------~~~~~~~~~~~~ayiiytsgstg~Pkgv~~~h~~~~~~~~~~~~~~~-------~~~ 406 (642)
T COG1020 342 PGLALDDALSE--IPDT------DPIPQALLGDALAYIIYTSGSTGQPKGVRIEHRALANLLNDAGARFG-------LDA 406 (642)
T ss_pred Ccccccccccc--CCcc------CcccccCCCCCeEEEEEccCCCCCCCCceecCHHHHHHHHHHHHhcC-------CCc
Confidence 11222211111 0000 11123445689999999999999999999999999987777666653 478
Q ss_pred CcEEEEecChhHHHHHHHHHHHHhcCCeEEEecC---CCHHHHHHHHHhcCeeecccChHHHHHHHhcccCCC--CCCCC
Q 011116 179 HPVSFFTLPMFHVFGFFMLVRAASKGETLVFMER---FDFEKMLKAVENYRVTYMPVSPPLIVAFINSKLTDK--YDLSS 253 (493)
Q Consensus 179 ~~~~~~~~pl~~~~g~~~~~~~l~~G~~~~~~~~---~~~~~~~~~l~~~~~t~l~~~P~~~~~l~~~~~~~~--~~l~~ 253 (493)
.|+++...+..+..+.+.++.++..|+++++... .++..+.+.+.++++|++..+|.++..+........ .....
T Consensus 407 ~d~~l~~~s~~fD~~~~~~f~~l~~G~~l~~~~~~~~~~~~~l~~~~~~~~vt~~~~~p~~~~~~~~~~~~~~~~~~~~~ 486 (642)
T COG1020 407 DDRVLALASLSFDASVFEIFGALLEGARLVLAPALLQVDPAALLELLEAQGITVLLLVPLLLRLLLLAALAPDLISPCER 486 (642)
T ss_pred ccEEeecCCcccchhHHHHHHHHhCCCEEEecCccccCCHHHHHHHHHHcCCEEEEecHHHHHHHHhchhhccccCCccc
Confidence 8899999999888888999999999999999854 578999999999999999999999998887632222 22335
Q ss_pred eeEEEecCCCCCHHHHHHHHHhCC-CCceeccccccccCCccccccCCCCCCCCCccccccCCceEEEEcCCCCccCCCC
Q 011116 254 LQLLGCGGAPLGKEVTLKFKEKFP-NVEIRQGYGLTETGGAGSRVIGPDEAERHGSVGRLAELMEAKIVDPATGEALPPG 332 (493)
Q Consensus 254 lr~v~~~Ge~~~~~~~~~~~~~~~-~~~v~~~yG~tE~g~~~~~~~~~~~~~~~~~~g~p~~~~~~~i~d~~~~~~~~~g 332 (493)
+|.+++|||.++.++...+....+ ...+++.||+||+..................+|+|+++..+.|+| +..++++.|
T Consensus 487 lr~~~~gGe~l~~~~~~~~~~~~~~~~~l~~~ygpTe~~~~~~~~~~~~~~~~~~piG~p~~n~~~~ild-~~~~~~p~g 565 (642)
T COG1020 487 LRQLLSGGEALPLALVQRLLQLAALARRLLNLYGPTEATLDAPSFPISAELESRVPIGRPVANTQLYILD-QGLRPLPLG 565 (642)
T ss_pred ccEEEEcCCCCCHHHHHHHHHhccccceEeeccCccHHhhheeeEEcccccCCCCCcceeeCCCeEEEEC-CCCCcCCCC
Confidence 999999999999999999988764 468999999999665554433222222256899999999999999 889999999
Q ss_pred CceEEEEeCccccccccCCcccccccccCCCeeeccceEEEcCCCcEEEEcccCCeEEeCceeeChHHHHHHHhcCC
Q 011116 333 QKGELWLRGPTIMKGYVGDDKATSETVHSEGWLKTGDLCYFDSNGFLFIVDRLKELIKYKAYQVPPVELEHLLHSNP 409 (493)
Q Consensus 333 ~~Gel~v~~~~~~~gy~~~~~~~~~~~~~~~~~~TgD~~~~~~~g~~~~~GR~~d~i~~~G~~i~~~~ie~~l~~~~ 409 (493)
..||+++.|.++.+||+++++.+.+.|..+.+|+|||++++.+||.+.++||.|+++|+.|.+|.+.+||..+.++|
T Consensus 566 v~gel~i~g~~~a~gy~~~p~lt~~~f~~~~~y~tgD~~r~~~dg~~e~lgr~D~qvki~g~Riel~eie~~l~~~~ 642 (642)
T COG1020 566 VPGELYIAGLGLALGYLNRPDLTAERFIALRLYRTGDLARPLADGALEYLGRKDSQVKIRGFRIELGEIEAALAEQP 642 (642)
T ss_pred CCeeeEECCcchhhhhcCChhhhHHHhhhccCccCCCeeeECCCCeEEEeccccceeEeceEecCcHHHHHHHhcCC
Confidence 99999999999999999999999999965459999999999999999999999999999999999999999998764
No 124
>TIGR03335 F390_ftsA coenzyme F390 synthetase. This enzyme, characterized in Methanobacterium thermoautotrophicum and found in several other methanogens, modifies coenzyme F420 by ligation of AMP (or GMP) from ATP (or GTP). On F420, it activates an aromatic hydroxyl group, which is unusual chemistry for an adenylyltransferase. This enzyme name has been attached to numbers of uncharacterized genes likely to instead act as phenylacetate CoA ligase, based on proximity to predicted indolepyruvate ferredoxin oxidoreductase (1.2.7.8) genes. The enzyme acts during transient exposure of the organism to oxygen.
Probab=100.00 E-value=6.2e-32 Score=268.62 Aligned_cols=329 Identities=17% Similarity=0.133 Sum_probs=229.7
Q ss_pred CCCCCCeEEEEccCCCCCCccceecchHHHHHHHHHhhhhcccCCCCCCCCCCcEEEEecChhHHHHHH-HHHHHHhcCC
Q 011116 127 TVYQSDPAAILYSSGTTGKVKGVLLSHLNVIAIIAGYYHVTEETDPNEGPPPHPVSFFTLPMFHVFGFF-MLVRAASKGE 205 (493)
Q Consensus 127 ~~~~~~~~~i~~TSGTTG~pK~v~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pl~~~~g~~-~~~~~l~~G~ 205 (493)
..+.++++.+++||||||.||++.++|.++..+.....+.+.. .++.++|+++...|..+..+.. ..+.+...|+
T Consensus 82 ~~~~~~i~~i~~TSGTTG~Pk~v~~T~~dl~~~~~~~~r~~~~----~G~~~gD~vl~~~~~~~~~g~~~~~~~~~~~Ga 157 (445)
T TIGR03335 82 SADWKDIYTIHETSGTSGTPKSFFLTWDDWKRYAEKYARSFVS----QGFTAGDRMVICASYGMNVGANTMTLAAREVGM 157 (445)
T ss_pred cCCHHHeEEEEeCCCCCCCcceeeecHHHHHHHHHHHHHHHHH----cCCCCCCeEEEEecCCcchhHHHHHHHHHHcCC
Confidence 3456788999999999999999999999998766554443311 2558899999998887766653 4456677888
Q ss_pred eEEEecCCCHHHHHHHHHhcCeeecccChHHHHHHHhcccCCCC--CCCCeeEEEecCCCCCHHHHHHHHHhCCCCceec
Q 011116 206 TLVFMERFDFEKMLKAVENYRVTYMPVSPPLIVAFINSKLTDKY--DLSSLQLLGCGGAPLGKEVTLKFKEKFPNVEIRQ 283 (493)
Q Consensus 206 ~~~~~~~~~~~~~~~~l~~~~~t~l~~~P~~~~~l~~~~~~~~~--~l~~lr~v~~~Ge~~~~~~~~~~~~~~~~~~v~~ 283 (493)
+++.... ....++.+++++++++.++|+.+..|++.....+. ...++|.+++|||++++++.+++++.| ++.+++
T Consensus 158 ~vi~~~~--~~~~~~~i~~~~~t~l~~~ps~ll~La~~~~~~g~~~~~~~lr~ii~gGE~l~~~~r~~ie~~~-g~~v~~ 234 (445)
T TIGR03335 158 SIIPEGK--CTFPIRIIESYRPTGIVASVFKLLRLARRMKAEGIDPAESSIRRLVVGGESFADESRNYVEELW-GCEVYN 234 (445)
T ss_pred EEEcCCc--hhHHHHHHHHhCCCEEEECHHHHHHHHHHHHHcCCCcccCcceEEEEcCCCCCHHHHHHHHHHh-CCcEEe
Confidence 7664443 35678999999999999999998888775544332 236899999999999999999999999 899999
Q ss_pred cccccccCCccccccCCCCCCCCCccccccCCceEEEEcCCCCccCCCCCceEEEEeCccccccccCCcccccccccCCC
Q 011116 284 GYGLTETGGAGSRVIGPDEAERHGSVGRLAELMEAKIVDPATGEALPPGQKGELWLRGPTIMKGYVGDDKATSETVHSEG 363 (493)
Q Consensus 284 ~yG~tE~g~~~~~~~~~~~~~~~~~~g~p~~~~~~~i~d~~~~~~~~~g~~Gel~v~~~~~~~gy~~~~~~~~~~~~~~~ 363 (493)
.||+||++. +..+. .....+.+.+...++|+|++++.++++|+.|||++++...... ..... --
T Consensus 235 ~YG~TE~~~-~~~c~------~~~g~h~~~d~~~vEIvDp~~~~~vp~Ge~GELvvT~L~~~~~------r~~~P---li 298 (445)
T TIGR03335 235 TYGSTEGTM-CGECQ------AVAGLHVPEDLVHLDVYDPRHQRFLPDGECGRIVLTTLLKPGE------RCGSL---LI 298 (445)
T ss_pred cCChhhhhh-eEEec------CCCCccccCCceEEEEEcCCCCCCCcCCCceEEEEEecCCCCc------cCCce---EE
Confidence 999999863 22211 1123444556789999998888999999999999996432100 00000 01
Q ss_pred eeeccceEEEcC-C----C----cEEEEcccCCeEEeCceeeChHHHHHHHhcC---CCcc-eEEEEeeeCCCCCeeEEE
Q 011116 364 WLKTGDLCYFDS-N----G----FLFIVDRLKELIKYKAYQVPPVELEHLLHSN---PEIA-DAAVIPYPDEEAGQIPMA 430 (493)
Q Consensus 364 ~~~TgD~~~~~~-~----g----~~~~~GR~~d~i~~~G~~i~~~~ie~~l~~~---~~v~-~~~v~~~~~~~~~~~~~~ 430 (493)
-|+|||++++.. + | .+...||.||+++++|.+++|.+||++|.++ +++. +..++........+.+.+
T Consensus 299 RYrtgD~~~~~~~~~C~CGr~~~r~~~~gR~dd~~~~~g~~~~p~~ie~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~v 378 (445)
T TIGR03335 299 NYDTEDTTVVISRDRCPCGRTHMRILNPEREAETIWISGVPFNRVDVERAVFQRENMDSLTGEYEAFLYGEEEGEITLRV 378 (445)
T ss_pred EeecCceEEEecCCCCCCCCCcceeCCCcccCceEEECCEEeCHHHHHHHHhccCCCCCCCccEEEEEecCCCCCceEEE
Confidence 399999999732 2 2 2445699999999999999999999999994 5554 345554443323335555
Q ss_pred EEEeCCCCCCCHHHHHHHHHhc----CCC-------CCCcceEEEe--ccccCC-CCCccch
Q 011116 431 FVVRKPGSNITEAEIMDFIAKQ----VAP-------YKKIRRVAFI--NSIPKS-TAGKILR 478 (493)
Q Consensus 431 ~v~~~~~~~~~~~~l~~~l~~~----l~~-------~~~p~~~~~~--~~lP~t-~~GK~~r 478 (493)
.++..+....+.+++.+.+.+. ++. ..+...+.++ ..||++ +.||..|
T Consensus 379 ~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~r 440 (445)
T TIGR03335 379 SLECEDKDNCSIHDIQENFTGTFLKYKPELIGSYDEGIFQILVNFTGPGELELHKIKGRPKR 440 (445)
T ss_pred EEEecCcccchHHHHHHHHHHHHhhhhhhhhhhhhcceEEEEEEEeCCCCccccccCCCcee
Confidence 6666554333444444444443 221 1222234444 589998 4688776
No 125
>COG1541 PaaK Coenzyme F390 synthetase [Coenzyme metabolism]
Probab=99.98 E-value=5.3e-30 Score=241.51 Aligned_cols=330 Identities=21% Similarity=0.243 Sum_probs=246.5
Q ss_pred CCCCCCCCCeEEEEccCCCCCCccceecchHHHHHHHHHhhhhcccCCCCCCCCCCcEEEEecCh-hHHHHHHHHHHHHh
Q 011116 124 SNMTVYQSDPAAILYSSGTTGKVKGVLLSHLNVIAIIAGYYHVTEETDPNEGPPPHPVSFFTLPM-FHVFGFFMLVRAAS 202 (493)
Q Consensus 124 ~~~~~~~~~~~~i~~TSGTTG~pK~v~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pl-~~~~g~~~~~~~l~ 202 (493)
.....+.++...|..||||||+|+.+.++..++..+...+.+.+.. .|...+|++....-. .+..|+..-+++..
T Consensus 83 ~~~~~~~~~i~~ihaSSGTTGkPt~~~~t~~D~~~wa~~~aR~~~~----~g~~~gd~v~~~~~yGl~tgg~~~~~ga~r 158 (438)
T COG1541 83 GDFAVPKEEIVRIHASSGTTGKPTVFGYTAKDIERWAELLARSLYS----AGVRKGDKVQNAYGYGLFTGGLGLHYGAER 158 (438)
T ss_pred ccccccccceEEEEccCCCCCCceeeecCHHHHHHHHHHHHHHHHH----ccCCCCCEEEEEeeeccccCCchhHHHHHh
Confidence 3445666777789999999999999999999999888887777654 456788888776653 22222344555556
Q ss_pred cCCeEEEecCCCHHHHHHHHHhcCeeecccChHHHHHHHhcccCCC--CCCCCeeEEEecCCCCCHHHHHHHHHhCCCCc
Q 011116 203 KGETLVFMERFDFEKMLKAVENYRVTYMPVSPPLIVAFINSKLTDK--YDLSSLQLLGCGGAPLGKEVTLKFKEKFPNVE 280 (493)
Q Consensus 203 ~G~~~~~~~~~~~~~~~~~l~~~~~t~l~~~P~~~~~l~~~~~~~~--~~l~~lr~v~~~Ge~~~~~~~~~~~~~~~~~~ 280 (493)
.|++++-...-+.+..+++++.+++|++.++|+.+..|++...+.+ ..-.++|.+++|+|++++++++.+.+.| ++.
T Consensus 159 ig~~vip~~~g~~~~~~~l~~df~~tvI~~tps~~l~lae~~~~~G~~~~~~~lk~~i~gaE~~see~R~~ie~~~-g~~ 237 (438)
T COG1541 159 IGATVIPISGGNTERQLELMKDFKPTVIAATPSYLLYLAEEAEEEGIDPDKLSLKKGIFGAEPWSEEMRKVIENRF-GCK 237 (438)
T ss_pred hCEEEEccCCccHHHHHHHHHhcCCcEEEEChHHHHHHHHHHHHcCCChhhcceeEEEEecccCCHHHHHHHHHHh-CCc
Confidence 7777666666678999999999999999999999999999887664 3346899999999999999999999999 999
Q ss_pred eeccccccccCCccccccCCCCCCCCCccccccCCceEEEEcCCCCccCCCCCceEEEEeCccccccccCCccccccccc
Q 011116 281 IRQGYGLTETGGAGSRVIGPDEAERHGSVGRLAELMEAKIVDPATGEALPPGQKGELWLRGPTIMKGYVGDDKATSETVH 360 (493)
Q Consensus 281 v~~~yG~tE~g~~~~~~~~~~~~~~~~~~g~p~~~~~~~i~d~~~~~~~~~g~~Gel~v~~~~~~~gy~~~~~~~~~~~~ 360 (493)
.++.||+||..+.++. .+......+...+...++|+||++++.+++|+.|||+++.-. .+.+
T Consensus 238 ~~diYGltE~~g~g~~-----eC~~~~glhi~eD~~~~Ei~dP~t~e~l~dge~GelV~T~L~------------~~~~- 299 (438)
T COG1541 238 AFDIYGLTEGFGPGAG-----ECTERNGLHIWEDHFIFEIVDPETGEQLPDGERGELVITTLT------------KEGM- 299 (438)
T ss_pred eeeccccccccCCccc-----ccccccCCCcchhhceeeeecCCcCccCCCCCeeEEEEEecc------------ccCc-
Confidence 9999999999776421 111112345567889999999999999999999999998532 1100
Q ss_pred CCCeeeccceEEEcCC----C-----cEEEEcccCCeEEeCceeeChHHHHHHHhcCCCcc-eEEEEeeeCCCCCeeEEE
Q 011116 361 SEGWLKTGDLCYFDSN----G-----FLFIVDRLKELIKYKAYQVPPVELEHLLHSNPEIA-DAAVIPYPDEEAGQIPMA 430 (493)
Q Consensus 361 ~~~~~~TgD~~~~~~~----g-----~~~~~GR~~d~i~~~G~~i~~~~ie~~l~~~~~v~-~~~v~~~~~~~~~~~~~~ 430 (493)
+---|+|||+..+.++ | ...+.||.||++++.|.+|+|..||++|.+.+++. +.+++... ++..+.+.+
T Consensus 300 PlIRYrtgDit~i~~~~C~cGr~~~ri~~I~GR~dD~l~~~G~~vfp~~ie~~l~~~~~~~~~yqi~~~~-~~~~d~L~V 378 (438)
T COG1541 300 PLIRYRTGDITVILSDPCGCGRTHRRIERIEGRSDDMLIVRGVNVFPSQIERVLLQIPEVTPHYQIILTR-NGGLDELTV 378 (438)
T ss_pred ceEEEEcCCeeEecccCCCCCCccccccccCcccccEEEECCEEeCHHHHHHHHhcccCCCceEEEEEec-CCCCceEEE
Confidence 1113999999999763 2 34699999999999999999999999999999998 78888776 555667788
Q ss_pred EEEeCCCCCC--CHHHHHHHHHhcC-CCCCCcceE--EEeccccCCCCCccch
Q 011116 431 FVVRKPGSNI--TEAEIMDFIAKQV-APYKKIRRV--AFINSIPKSTAGKILR 478 (493)
Q Consensus 431 ~v~~~~~~~~--~~~~l~~~l~~~l-~~~~~p~~~--~~~~~lP~t~~GK~~r 478 (493)
.|++.++... +..++.+.+.+.+ ........| +.+.++|+|. ||..|
T Consensus 379 ~vE~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~v~~v~~g~l~r~~-~K~kr 430 (438)
T COG1541 379 RVELENEAEELEDERRLAKKLIKNIKSELGVRVEVELVEPGELPRTE-GKAKR 430 (438)
T ss_pred EEEecCcccchHHHHHHHHHHHHHHHhhcCCceEEEEEeccceeccc-CceeE
Confidence 8888764111 1222223443332 222233334 4447999985 56544
No 126
>KOG1178 consensus Non-ribosomal peptide synthetase/alpha-aminoadipate reductase and related enzymes [Secondary metabolites biosynthesis, transport and catabolism]
Probab=99.97 E-value=1.6e-30 Score=268.17 Aligned_cols=452 Identities=18% Similarity=0.181 Sum_probs=294.8
Q ss_pred HHHHHHhhCCCCCCCEEEEECCCCCCcHHHHHHHHHHcCCeeccCCCCCC----HH---HHHHHHhhcCCeEEEEcCCCc
Q 011116 19 LSHALSKRDSLCRKTTSLTSSPLPPSTSPVLYFSLLSLGVVISPANPLSS----TS---EVSHQIQLSKPSIAFATSHTS 91 (493)
Q Consensus 19 lA~~L~~~~gl~~gd~V~l~~~~~~~~~~~~~lA~~~~G~~~v~i~~~~~----~~---~l~~~l~~~~~~~il~~~~~~ 91 (493)
+|..| ...|..+|+.|++++. ++.++++..++.++.|..+++++|+++ ++ .+++.+......++.-.+...
T Consensus 82 ~~q~l-~~~~~~~~~~v~i~~~-~~~d~~v~v~~~~~~g~~~~~idp~~~~~e~~~~~~~ia~~~~s~~~~i~~~l~i~~ 159 (1032)
T KOG1178|consen 82 IAQFL-VSLGSLRGTTVAIYML-PSVDLVVSVFAVLAAGLTFLPIDPSWPNSELAGYLMRIAHFLTSVELEIVRRLNIID 159 (1032)
T ss_pred hHHHh-hhcccccCceEEEecc-CcCCeeeeeeehhhcceEEEEecCCCcccccchHHHhhhhhheeccceehhhhhhHH
Confidence 47777 7778899999999999 999999999999999999999999999 22 111111111111111100000
Q ss_pred ccCCC---CCcEEEecCchhhhhhccCcccccccCCCCCCCCCCeEEEEccCCCCCCccceecchHHHHHHHHHhhhhcc
Q 011116 92 YKLPS---NLRTILMDSPEFISLLNQNEDVADFANSNMTVYQSDPAAILYSSGTTGKVKGVLLSHLNVIAIIAGYYHVTE 168 (493)
Q Consensus 92 ~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~TSGTTG~pK~v~~t~~~~~~~~~~~~~~~~ 168 (493)
....+ ...+... .+.+..+.... .........++..+.+.||||+||.||+|..+|..+...-.+....+.
T Consensus 160 ~~~~~~~~~~sv~~~-~~~f~~~~~~~-----~~r~~~~~~~ds~~~l~~tSgs~G~pk~v~~~~~sl~~~fdw~~~~f~ 233 (1032)
T KOG1178|consen 160 ILLNSLFPKLSVETI-ADSFQMVLHNE-----DTREIRVGGNDSTALLSFTSGSTGVPKGVAGTHFSLANAFDWMFTTFP 233 (1032)
T ss_pred HHhhccccccchhhc-cchhhhhhccC-----CCcceeeecccccceEeecccccccccccchhHHHHHhhhhhccccCC
Confidence 00000 1111111 12222221111 122222445677899999999999999999999999988887766654
Q ss_pred cCCCCCCCCCCcEEEEecChhHHHHHHHHHHHHhcCCe-EEEecC---CCHHHHHHHHHhcCeeecccChHHHHHHHhcc
Q 011116 169 ETDPNEGPPPHPVSFFTLPMFHVFGFFMLVRAASKGET-LVFMER---FDFEKMLKAVENYRVTYMPVSPPLIVAFINSK 244 (493)
Q Consensus 169 ~~~~~~~~~~~~~~~~~~pl~~~~g~~~~~~~l~~G~~-~~~~~~---~~~~~~~~~l~~~~~t~l~~~P~~~~~l~~~~ 244 (493)
. ...+.+-.....+.+........+++++.. +..+.. -++.++...+++++++..+.+|++.+.++...
T Consensus 234 ~-------t~s~~~~~~~~~~~~d~i~~~~~~~L~~~~~l~~p~~~~~~~~~~l~~~le~y~i~~~~~~~a~~~~l~~~~ 306 (1032)
T KOG1178|consen 234 P-------TGSDRFTFKTSVYFDDTIQKFIGALLFNGNNLLVPTATIKDTPGQLASTLERYGITVSHLLPAMCQLLLAIL 306 (1032)
T ss_pred c-------CccchhhhhheeecccchHHHHhhHhhcCceeecccccCccchhhHHHHHHhhhheeeeechhhhhhhhhhc
Confidence 3 455555333334333444444555555555 444432 24799999999999999999999987776654
Q ss_pred cCC-------------CCCCCCeeEEEecCCCCCHHHHHHHHHhCCCCceeccccccccCCccccccC--CCCCCCCCcc
Q 011116 245 LTD-------------KYDLSSLQLLGCGGAPLGKEVTLKFKEKFPNVEIRQGYGLTETGGAGSRVIG--PDEAERHGSV 309 (493)
Q Consensus 245 ~~~-------------~~~l~~lr~v~~~Ge~~~~~~~~~~~~~~~~~~v~~~yG~tE~g~~~~~~~~--~~~~~~~~~~ 309 (493)
... ....+.++....+||+....+...+.+.+...-...-|+++|.......... ....-....+
T Consensus 307 ~~~~~~l~~~~~~~dl~~~~~~Lkl~~~~~ep~~v~l~~s~~~~~~~~~~~~~y~s~~~~~~~s~~~~~~s~~ll~~~~v 386 (1032)
T KOG1178|consen 307 TTSLPLLEHAFSLSDLLTKRSCLKLVVLGGEPLLVSLYTSTFDLLAEIFFGLPYLSTDPTGLVSYDDFSPSKVLLTNENV 386 (1032)
T ss_pred CcchhhhhhhhhcccccccchhheeeeecCCccchhhhhhhhhcccceeeeecccCCCCccceeHHhhCcccceecceeE
Confidence 331 1123479999999999999998866665522223334888887665443111 1111111111
Q ss_pred ccccCC-------ceEEEEcCCCCccCCCCCceEE----EEeCccccccccCCcccccccc-----cCCCeeeccceEEE
Q 011116 310 GRLAEL-------MEAKIVDPATGEALPPGQKGEL----WLRGPTIMKGYVGDDKATSETV-----HSEGWLKTGDLCYF 373 (493)
Q Consensus 310 g~p~~~-------~~~~i~d~~~~~~~~~g~~Gel----~v~~~~~~~gy~~~~~~~~~~~-----~~~~~~~TgD~~~~ 373 (493)
+.+..+ .-.++.. ..+.+.+.+..+.. +-.+.++..|| ..++.+..++ ..+.+|+|||+++.
T Consensus 387 ~~~p~~~~~~~~~~~~~~~~-~~~~~~~~~v~~~~l~~~~~~~~~~~~g~-~~~~~~~~~~~~~d~~~~r~y~tgD~gr~ 464 (1032)
T KOG1178|consen 387 YSVPKFDSIIGSLTVLESLY-RAGGEGEGGVGKGCLGAEQNLSSWVVDGY-STPENFLPNFLTVDGVKARIYRTGDNGRS 464 (1032)
T ss_pred EeccchhhccCCCcceeeee-ccCcccCCcccceeecccccccceeeccc-cchhhcCCcccccccchhhccccccccee
Confidence 111111 1111111 22222222221111 11223333332 2222222221 12357999999999
Q ss_pred cCCCcEEEEcccCCeEEeCceeeChHHHHHHHhcCCCcceEEEEeeeCCCCCeeEEEEEEeCCCCC-CCHHHHHHHHHhc
Q 011116 374 DSNGFLFIVDRLKELIKYKAYQVPPVELEHLLHSNPEIADAAVIPYPDEEAGQIPMAFVVRKPGSN-ITEAEIMDFIAKQ 452 (493)
Q Consensus 374 ~~~g~~~~~GR~~d~i~~~G~~i~~~~ie~~l~~~~~v~~~~v~~~~~~~~~~~~~~~v~~~~~~~-~~~~~l~~~l~~~ 452 (493)
.++|-+.+.||.|++||.+|.++...+|+.++..+|.|.++.+....+..-++.+++|++...... ....+|+.++.++
T Consensus 465 l~ng~l~~~GR~d~qIK~rG~Ri~L~ei~t~v~~~p~v~~~itl~~~~~~~~~~l~aFvv~~~~~~~~~~~~i~~~l~~~ 544 (1032)
T KOG1178|consen 465 LKNGGLEISGRADRQIKDRGVRIELGELNTVVEVHPDVKEAITLARENSTVGQTLLAFVVERGGSKSVLIRDIRNYLKKE 544 (1032)
T ss_pred ecCCCEEEEEeccceEEEccEEEehhhhchhhccCcchhhhheeeeeccccCceEEEEEeccCCCCchhHHHHHHhhccc
Confidence 999999999999999999999999999999999999999999999988877889999999876533 3357899999999
Q ss_pred CCCCCCcceEEEeccccCCCCCccchHHHHHHHhh
Q 011116 453 VAPYKKIRRVAFINSIPKSTAGKILRRELVTHAIS 487 (493)
Q Consensus 453 l~~~~~p~~~~~~~~lP~t~~GK~~r~~l~~~~~~ 487 (493)
|+.|++|..++.++++|+|++||+++.+|.+...+
T Consensus 545 La~y~vPs~~V~l~~vPl~~~GKvDkkaL~~~~s~ 579 (1032)
T KOG1178|consen 545 LASYMLPSLVVPLAKVPLNPNGKVDKKALLEYNSK 579 (1032)
T ss_pred ccceecceEEEEhhhCCcCCCCCcChhhhhhhhhh
Confidence 99999999999999999999999999999984443
No 127
>KOG3628 consensus Predicted AMP-binding protein [General function prediction only]
Probab=99.97 E-value=3.6e-28 Score=243.40 Aligned_cols=462 Identities=16% Similarity=0.229 Sum_probs=323.1
Q ss_pred chhhhHHHHHHhhCCCCCCCEEEEECCCCCCcHHHHHHHHHHcCCeeccCCCCC------CHHHHHHHHhhcCCeEEEEc
Q 011116 14 SARFTLSHALSKRDSLCRKTTSLTSSPLPPSTSPVLYFSLLSLGVVISPANPLS------STSEVSHQIQLSKPSIAFAT 87 (493)
Q Consensus 14 ~~~~~lA~~L~~~~gl~~gd~V~l~~~~~~~~~~~~~lA~~~~G~~~v~i~~~~------~~~~l~~~l~~~~~~~il~~ 87 (493)
++++ |.+|..+.-+++||.|+++++ +++|++++++||+.+|++++|+.|.. ..+.+..+++.+++.+|+++
T Consensus 811 va~i--~~~l~~k~~lk~Gd~V~Lmy~-~sie~vaa~~~Cly~GliPIpv~p~~~s~l~~~l~~~~~ii~~~kv~ailv~ 887 (1363)
T KOG3628|consen 811 VARI--AEYLQDKGHLKAGDHVVLMYP-PSIEFVAAIYACLYLGLIPIPVPPPHASNLIEDLPTFRMIIKVYKVAAILVD 887 (1363)
T ss_pred HHHH--HHHHHhcccCCCCCeEEEEcC-ChHHHHHHHHHHHhcCeeeeccCCccHHhhhhhhHHHHHHHHHhhhheEEec
Confidence 4555 899977778999999999999 99999999999999999999998743 34678889999999999999
Q ss_pred CCCcccCCCCCcEEEecCchhhhhhccC----------cc--cccccCCCCCCCCCCeEEEEccCCCCCCccceecchHH
Q 011116 88 SHTSYKLPSNLRTILMDSPEFISLLNQN----------ED--VADFANSNMTVYQSDPAAILYSSGTTGKVKGVLLSHLN 155 (493)
Q Consensus 88 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~----------~~--~~~~~~~~~~~~~~~~~~i~~TSGTTG~pK~v~~t~~~ 155 (493)
......++.......++...|..++..+ .+ .......+-....+.+|++-|.--++|.-.++.++|..
T Consensus 888 ~~v~~lLrsr~~s~~~~~s~~p~i~~~~~~~~t~~k~~~~~~k~~~~~~~g~~~k~~~a~v~~~~~~dg~l~~~~msHss 967 (1363)
T KOG3628|consen 888 QKVLKLLRSREASAHVDQSAIPLILVLPKLPETIRKRKKNIKKLNTPTPPGLNNKETPALVWFNVSTDGMLIGVKMSHSS 967 (1363)
T ss_pred HHHHHHHhhhhHHHHhhhhcchhhhcccccchhhhhhhhhhhccCCCCCccccCCCceEEEEEEecCCcceeeeeccHHH
Confidence 8766666541111111111111111100 00 00112233355668899999998899999999999999
Q ss_pred HHHHHHHhhhhcccCCCCCCCCCCcEEEEecChhHHHHH-HHHHHHHhcCCeEEEecC----CCHHHHHHHHHhcCeeec
Q 011116 156 VIAIIAGYYHVTEETDPNEGPPPHPVSFFTLPMFHVFGF-FMLVRAASKGETLVFMER----FDFEKMLKAVENYRVTYM 230 (493)
Q Consensus 156 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pl~~~~g~-~~~~~~l~~G~~~~~~~~----~~~~~~~~~l~~~~~t~l 230 (493)
+++.+......+.. .+..-++...+.+...|+ .+.+...+.|...++.++ .++..++..++++++.-+
T Consensus 968 lla~Ck~iKe~~~l-------~~~rpl~~~~~~~sGlgf~~wcLlgVysGh~T~Li~p~~l~nnpsLll~~i~~~kvkDt 1040 (1363)
T KOG3628|consen 968 LLAFCKIIKETCQL-------YKSRPLLGCSSPYSGLGFNHWCLLGVYSGHPTLLISPMDLENNPSLLLQIISQYKVKDT 1040 (1363)
T ss_pred HHHHHHHHHHHHcc-------ccCCceEEEecCccchhHHHHHHHHHHcCCceeecCHHHhhcCHHHHHHHHhccccccc
Confidence 99999998888754 556666666666666666 788889999999888764 478999999999999998
Q ss_pred ccChHHHHHHHhcccCCCCCCC------CeeEEEecCCCCCHHHHHHHHHhCCCCc-----eecccccc-----------
Q 011116 231 PVSPPLIVAFINSKLTDKYDLS------SLQLLGCGGAPLGKEVTLKFKEKFPNVE-----IRQGYGLT----------- 288 (493)
Q Consensus 231 ~~~P~~~~~l~~~~~~~~~~l~------~lr~v~~~Ge~~~~~~~~~~~~~~~~~~-----v~~~yG~t----------- 288 (493)
+.+-..+............+++ +...++..-|+....+.+.+.+.|...- +.-.|++-
T Consensus 1041 ~~~~~tln~c~~~l~t~~enl~~~gnn~s~s~vv~~~~RPr~ali~sf~klfa~igLsp~avStsys~r~Np~Ic~r~~s 1120 (1363)
T KOG3628|consen 1041 YPTYSTLNLCQKGLETSVENLSKRGNNTSSSIVVPAEERPRIALIASFKKLFAAIGLSPRAVSTSYSSRVNPFICLRSYS 1120 (1363)
T ss_pred chhHHHHHHHHhccccccchhhhhhcccccceeeecCCccHHHHHHHHHHHHHHcCCChhhhcccccccCChHhhhcccc
Confidence 8888777666554433222221 1134444556666777787777662111 22222221
Q ss_pred --ccCCccccc------------cCCCCCCCCCccccccCCceEEEEcCCCCccCCCCCceEEEEeCccccccccCCccc
Q 011116 289 --ETGGAGSRV------------IGPDEAERHGSVGRLAELMEAKIVDPATGEALPPGQKGELWLRGPTIMKGYVGDDKA 354 (493)
Q Consensus 289 --E~g~~~~~~------------~~~~~~~~~~~~g~p~~~~~~~i~d~~~~~~~~~g~~Gel~v~~~~~~~gy~~~~~~ 354 (493)
|-.....-. -..+........|+..+++++.|++||+..+|.+|+.||+|+.|.+.+.+|++..+.
T Consensus 1121 g~~Pt~~y~D~raLR~grV~~ve~~ap~~l~L~dSG~~~~~~~i~IvnPEtk~pc~dge~GEIW~~S~hnA~~~~~~~d~ 1200 (1363)
T KOG3628|consen 1121 GPEPTTVYLDARALREGRVRLVEVGAPHSLLLYDSGKLPVYTDIAIVNPETKGPCRDGELGEIWVNSAHNASCSFTIGDE 1200 (1363)
T ss_pred CCCCcceeechhhhhccceeeeecCCCCccccccCCcccccceeEEeCCccccccccCCcceEEeccccccccccccCch
Confidence 111000000 000001111245788899999999999999999999999999999999888754221
Q ss_pred -ccccc---------cCCCeeeccceEEEcC------C----CcEEEEcccCCeEEeCceeeChHHHHHHHhc-CCCcce
Q 011116 355 -TSETV---------HSEGWLKTGDLCYFDS------N----GFLFIVDRLKELIKYKAYQVPPVELEHLLHS-NPEIAD 413 (493)
Q Consensus 355 -~~~~~---------~~~~~~~TgD~~~~~~------~----g~~~~~GR~~d~i~~~G~~i~~~~ie~~l~~-~~~v~~ 413 (493)
....| ....|-||||+|+... + ..+|++|-.++.+.++|.+.+|.+||..+.. ||.|.+
T Consensus 1201 ~~~~~fn~rl~~g~~~~~sy~RTG~LGFl~~t~~t~~~~e~~~~LyVlG~i~EtlEl~GL~h~p~DIE~TV~~vH~~I~~ 1280 (1363)
T KOG3628|consen 1201 LRSNHFNARLSSGDLLGKSYARTGDLGFLRRTSLTDANVERHDLLYVLGAIDETLELNGLRHFPSDIETTVERVHPSIGG 1280 (1363)
T ss_pred hhhhhhhhhccccccccccceeeeeeeeeeeeecccccceeeeeEEEeecccceeeecCcccCcchHHHHHHHhcccccc
Confidence 11111 2346999999999942 2 2689999999999999999999999998875 799999
Q ss_pred EEEEeeeCCCCCeeEEEEEEeCCCCCCCHHHHHHHHHh-cCCCCCCcceEE-Ee--ccccCCCCCccchHHHHHHHhhCC
Q 011116 414 AAVIPYPDEEAGQIPMAFVVRKPGSNITEAEIMDFIAK-QVAPYKKIRRVA-FI--NSIPKSTAGKILRRELVTHAISGN 489 (493)
Q Consensus 414 ~~v~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~l~~-~l~~~~~p~~~~-~~--~~lP~t~~GK~~r~~l~~~~~~~~ 489 (493)
|+||.. +-.+++++++.. +....+|.-.+.+ .|..+.++..++ ++ ..+|+++.|...|..+++.+..++
T Consensus 1281 cavF~~-----~glvVvviE~~g--q~~~~~LvPlIv~~vL~eH~iI~dvV~fV~~G~~p~~~~gEK~R~~I~~~w~~~k 1353 (1363)
T KOG3628|consen 1281 CAVFQA-----TGLVVVVIECHG--QQELADLVPLIVNVVLEEHYIILDVVAFVDKGVFPRNSRGEKQRAHILDSWLAGK 1353 (1363)
T ss_pred eeeEee-----CCeEEEEEEecC--chhHhhhhHHHHHHHHhhcceEEEEEEEecCCccccCCchhhHHHHHHHHHHhcc
Confidence 999964 334566666543 3334444444433 356666655444 44 589999999999999999999998
Q ss_pred CCC
Q 011116 490 LSK 492 (493)
Q Consensus 490 ~~~ 492 (493)
++.
T Consensus 1354 L~~ 1356 (1363)
T KOG3628|consen 1354 LDP 1356 (1363)
T ss_pred cce
Confidence 864
No 128
>PRK09188 serine/threonine protein kinase; Provisional
Probab=99.87 E-value=2.6e-21 Score=183.65 Aligned_cols=118 Identities=22% Similarity=0.312 Sum_probs=110.1
Q ss_pred CCCeeeccceEEE-cCCCcEEEEcccCCeEEeCc---eeeChHHHHHHHhcCCCcceEEEEeeeCCCCCeeEEEEEEeCC
Q 011116 361 SEGWLKTGDLCYF-DSNGFLFIVDRLKELIKYKA---YQVPPVELEHLLHSNPEIADAAVIPYPDEEAGQIPMAFVVRKP 436 (493)
Q Consensus 361 ~~~~~~TgD~~~~-~~~g~~~~~GR~~d~i~~~G---~~i~~~~ie~~l~~~~~v~~~~v~~~~~~~~~~~~~~~v~~~~ 436 (493)
.+|||+|||+|++ |++|+++|.||.+ +| .+|+|. ||++|.+||+|.+|+|++++++.+++.++++|++..
T Consensus 207 ~dgW~~TGDlg~~~d~dG~l~~~gR~~-----~G~~i~nV~p~-IE~~L~~hp~V~eaaVvgvpd~~~ge~v~A~Vv~~~ 280 (365)
T PRK09188 207 SRIWLATGKKVYNFITRGLFSWSDGEG-----TGDRIDNEAPA-IQAALKSDPAVSDVAIALFSLPAKGVGLYAFVEAEL 280 (365)
T ss_pred cCcEEeCCCEEEEEcCCCeEEEEecCc-----CCcCceeeCHH-HHHHHHhCCCccEEEEEEEEcCCCCeEEEEEEEECC
Confidence 5899999999998 7999999999997 78 799999 999999999999999999999999999999999863
Q ss_pred CCCCCHHHHHHHHHhcCCCCCCcceEEEeccccCCCCCccchHHHHHHHhh
Q 011116 437 GSNITEAEIMDFIAKQVAPYKKIRRVAFINSIPKSTAGKILRRELVTHAIS 487 (493)
Q Consensus 437 ~~~~~~~~l~~~l~~~l~~~~~p~~~~~~~~lP~t~~GK~~r~~l~~~~~~ 487 (493)
..+.++++++++++|+. ++|+.+.++++||+|++||++|+.|++.+.+
T Consensus 281 --~~~~~el~~~l~~~L~~-kvP~~v~~v~~lP~t~~GKi~R~~Lr~~~~~ 328 (365)
T PRK09188 281 --PADEKSLRARLAGAKPP-KPPEHIQPVAALPRDADGTVRDDILRLIAMN 328 (365)
T ss_pred --CCCHHHHHHHHHhhchh-cCCcEEEEECCCCCCCCCCccHHHHHHHhhc
Confidence 46778999999999999 9999999999999999999999999998744
No 129
>TIGR02304 aden_form_hyp probable adenylate-forming enzyme. Members of this family form a distinct clade within a larger family of proteins that also includes coenzyme F390 synthetase, an enzyme known in Methanobacterium thermoautotrophicum and a few other methanogenic archaea. That enzyme adenylates coenzyme F420 to F390, a reversible process, during oxygen stress. Other informative homologies include domains of the non-ribosomal peptide synthetases involved in activation by adenylation. The family defined by this model is likely to be of an adenylate-forming enzyme related to but distinct from coenzyme F390 synthetase.
Probab=99.84 E-value=6.3e-19 Score=171.41 Aligned_cols=247 Identities=16% Similarity=0.132 Sum_probs=165.8
Q ss_pred eEEEEccCCCCCCccceecchHHHHHHHHHhhhhcccCCCCCCCCCCcEEEEecChhHHHHHHHHHHHHhcCCe-EEEec
Q 011116 133 PAAILYSSGTTGKVKGVLLSHLNVIAIIAGYYHVTEETDPNEGPPPHPVSFFTLPMFHVFGFFMLVRAASKGET-LVFME 211 (493)
Q Consensus 133 ~~~i~~TSGTTG~pK~v~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pl~~~~g~~~~~~~l~~G~~-~~~~~ 211 (493)
-..+..||||||+|-.+..+......+.+.....+.. .|...++++.....-. + .++..+..... +-..+
T Consensus 101 ~~~v~~TSGSSG~p~~f~~~~~~~~~~~a~~~~~~~~----~g~~~g~r~a~~~~~~---~--~ly~~~~~~~~~~~~~~ 171 (430)
T TIGR02304 101 NISVGLSSGTSGRRGLFVVSPEEQQMWAGGILAKVLP----DGLFAKHRIAFFLRAD---N--NLYQSVNNRWISLDFFD 171 (430)
T ss_pred cEEEEECCCCCCCceEEEECHHHHHHHHHHHHhhhCc----cccccCCcEEEEEccC---h--hHHHHHHhccceeeecC
Confidence 4567789999999999999998886655443333222 2345555555443111 0 11111111111 11221
Q ss_pred -CCCHHHHHHHHHhcCeeecccChHHHHHHHhcccCCCCCCCCeeEEEecCCCCCHHHHHHHHHhCCCCceecccccccc
Q 011116 212 -RFDFEKMLKAVENYRVTYMPVSPPLIVAFINSKLTDKYDLSSLQLLGCGGAPLGKEVTLKFKEKFPNVEIRQGYGLTET 290 (493)
Q Consensus 212 -~~~~~~~~~~l~~~~~t~l~~~P~~~~~l~~~~~~~~~~l~~lr~v~~~Ge~~~~~~~~~~~~~~~~~~v~~~yG~tE~ 290 (493)
..+.+.+++.|++++|+++.++|+.+..|++.....+.. ..++.++++||.++++..+.+++.| +++|++.||+||
T Consensus 172 l~~~~~~~l~~L~~~~P~~L~g~pS~l~~LA~~~~~~~l~-~~~k~ii~~~E~l~~~~r~~Ie~~f-g~~V~~~YG~tE- 248 (430)
T TIGR02304 172 LLAPFQAHIKRLNQRKPSIIVAPPSVLRALALEVMEGELT-IKPKKVISVAEVLEPQDRELIRNVF-KNTVHQIYQATE- 248 (430)
T ss_pred CCcCHHHHHHHHHHhCCCEEEEcHHHHHHHHHHHHhcCCC-CCceEEEEccCCCCHHHHHHHHHHh-CCCeeEccCCch-
Confidence 146899999999999999999999999999976654443 4789999999999999999999999 899999999999
Q ss_pred CCccccccCCCCCCCCCccccccCCceEE--EEcCCCCccCCCCCceEEEEeCccccccccCCcccccccccCCCeeecc
Q 011116 291 GGAGSRVIGPDEAERHGSVGRLAELMEAK--IVDPATGEALPPGQKGELWLRGPTIMKGYVGDDKATSETVHSEGWLKTG 368 (493)
Q Consensus 291 g~~~~~~~~~~~~~~~~~~g~p~~~~~~~--i~d~~~~~~~~~g~~Gel~v~~~~~~~gy~~~~~~~~~~~~~~~~~~Tg 368 (493)
|.+++.| ..+..+.-.+.+.++ ++|++ ++ ++.++|+-..... +---|+||
T Consensus 249 g~la~eC-------~~g~lHl~ed~~~vE~~ivD~~-~~-------~~~ViT~L~n~~~-------------PlIRYrtG 300 (430)
T TIGR02304 249 GFLASTC-------RCGTLHLNEDLVHIEKQYLDEH-KR-------FVPIITDFTRTTQ-------------PIVRYRLN 300 (430)
T ss_pred hheEEec-------CCCCEEEccccEEEEeeEECCC-Cc-------eEEEEecCCCccc-------------eEEeeeCC
Confidence 5554332 122344444556666 78843 33 3456664311110 00129999
Q ss_pred ceEEEcCC----C----cE-EEEcccCCeEEe---Ccee--eChHHHHHHHh-cCCCcceEEEEee
Q 011116 369 DLCYFDSN----G----FL-FIVDRLKELIKY---KAYQ--VPPVELEHLLH-SNPEIADAAVIPY 419 (493)
Q Consensus 369 D~~~~~~~----g----~~-~~~GR~~d~i~~---~G~~--i~~~~ie~~l~-~~~~v~~~~v~~~ 419 (493)
|++...++ | .+ .+.||.+|++++ +|.. ++|..++.++. ..++|.+++++..
T Consensus 301 D~~~~~~~~C~CGr~~~~i~~I~GR~dD~l~~~~~~G~~v~v~p~~~~~~i~~~~~~i~~yQi~Q~ 366 (430)
T TIGR02304 301 DILVESEQPCSCGSATMAIERIEGRQDDIFQLITRSGDEQTVFPDFIRRVILFTLPLIVEYRVLQT 366 (430)
T ss_pred CEEEeCCCCCCCCCcccccCCccCccCCEEEEecCCCCeEEeCHHHHHHHHHhcCCCCceEEEEEc
Confidence 99888543 2 23 489999999985 4544 59999998855 5789999988853
No 130
>TIGR03089 conserved hypothetical protein TIGR03089. This protein family is found, so far, only in the Actinobacteria (Streptomyces, Mycobacterium, Corynebacterium, Nocardia, Propionibacterium, etc.) and never more than one to a genome. Members show twilight-level sequence similarity to family of AMP-binding enzymes described by Pfam model pfam00501.
Probab=99.84 E-value=9.2e-20 Score=163.89 Aligned_cols=171 Identities=15% Similarity=0.154 Sum_probs=128.9
Q ss_pred hHHHHHHhh-CCCCCCCEEEEECCCCCCcHHHHHHHHHHcCCeeccCCCCCCHHHHHHHHhhcCCeEEEEcCCCcccCCC
Q 011116 18 TLSHALSKR-DSLCRKTTSLTSSPLPPSTSPVLYFSLLSLGVVISPANPLSSTSEVSHQIQLSKPSIAFATSHTSYKLPS 96 (493)
Q Consensus 18 ~lA~~L~~~-~gl~~gd~V~l~~~~~~~~~~~~~lA~~~~G~~~v~i~~~~~~~~l~~~l~~~~~~~il~~~~~~~~~~~ 96 (493)
++|++| .+ .|+++||+|+++++ |+++++++++||+++|++++|++ .+++++++++++....+..
T Consensus 39 ~~a~~L-~~~~Gv~~GdrV~i~~~-n~~~~~~~~~a~~~~G~v~vp~n-------------~s~a~~~v~~~~~~~~~~~ 103 (227)
T TIGR03089 39 KTANLL-QDELDAEPGSRVALDLP-AHWQTAVWLLAAWSTGVEVVLAG-------------DPDADVVVTGPDRLAAAAG 103 (227)
T ss_pred HHHHHH-HHHhCCCCCCEEEEECC-CCHHHHHHHHHHHHcCCEEEeCC-------------CCCCCEEEeCcchhhhccc
Confidence 349999 66 79999999999999 99999999999999999999995 6789999998876665432
Q ss_pred CCcEEEec-----C----------chhhhhhccCcccccccCCCC-CCCCCCeEEEEccCCCCCCccceecchHHHHHHH
Q 011116 97 NLRTILMD-----S----------PEFISLLNQNEDVADFANSNM-TVYQSDPAAILYSSGTTGKVKGVLLSHLNVIAII 160 (493)
Q Consensus 97 ~~~~~~~~-----~----------~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~i~~TSGTTG~pK~v~~t~~~~~~~~ 160 (493)
....+.+. . .+|...+.... . ..... ...++|++.++||||+ +|.++....
T Consensus 104 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~-~~~~~~~~~~~D~a~l~yTsg~---------~~~~~~~~~ 170 (227)
T TIGR03089 104 SGEVVALSLDPLGRRVAGELPPGVIDFAPEVRVHG---D-QFAPYEPPDATAPALVAGGGEW---------TGAELVAAA 170 (227)
T ss_pred CCceEEEeccccccCCCCCCCCcccchhhhhhccC---C-CCCCCCCCCCCcceeeeccccc---------cHHHHHHHH
Confidence 11222221 0 11222222110 1 11111 3456899999999986 555555443
Q ss_pred HHhhhhcccCCCCCCCCCCcEEEEecChhHHHHH-HHHHHHHhcCCeEEEecCCCHHHHHHHHHhcCee
Q 011116 161 AGYYHVTEETDPNEGPPPHPVSFFTLPMFHVFGF-FMLVRAASKGETLVFMERFDFEKMLKAVENYRVT 228 (493)
Q Consensus 161 ~~~~~~~~~~~~~~~~~~~~~~~~~~pl~~~~g~-~~~~~~l~~G~~~~~~~~~~~~~~~~~l~~~~~t 228 (493)
... ++.++|+++ ..|++|..|+ ..++.+++.|+++++.++++++.+++.++++|+|
T Consensus 171 ----~~~-------~l~~~D~~l-~~Pl~H~~gl~~~~~~~l~~G~t~v~~~rFd~~~~l~~i~~~~vT 227 (227)
T TIGR03089 171 ----RAA-------GLPPGDRVL-VLAWTDLEDFLATLLAPLAAGGSLVLVTHPDPARLDQIAETERVT 227 (227)
T ss_pred ----hhc-------CCCCCCeEE-ecCCCchHHHHHHHHHHhccCceEEEecCCCHHHHHHHHHhhcCC
Confidence 222 458999999 9999999998 6799999999999999999999999999999986
No 131
>KOG3628 consensus Predicted AMP-binding protein [General function prediction only]
Probab=99.80 E-value=1.2e-18 Score=175.86 Aligned_cols=468 Identities=14% Similarity=0.176 Sum_probs=291.4
Q ss_pred cccchhhhHHH-HHHhhCCCCCCCEEEEECCCCC--CcHHHHHHHHHHcCCeeccCCCCCCHHHHHHHHhhcCCeEEEEc
Q 011116 11 ANSSARFTLSH-ALSKRDSLCRKTTSLTSSPLPP--STSPVLYFSLLSLGVVISPANPLSSTSEVSHQIQLSKPSIAFAT 87 (493)
Q Consensus 11 ~~~~~~~~lA~-~L~~~~gl~~gd~V~l~~~~~~--~~~~~~~lA~~~~G~~~v~i~~~~~~~~l~~~l~~~~~~~il~~ 87 (493)
++++.++ |+ .| .+-|++++|+|.+++. .+ +++++..++|...|.+++|+.+..+.+++..+++....+.++++
T Consensus 131 ~~rA~k~--a~~~l-~ksgl~~~~~vvL~Y~-~~e~ie~~isl~gc~l~g~~~vp~~e~~s~~el~~i~~~~~~~~~l~t 206 (1363)
T KOG3628|consen 131 LNRAEKV--AHVEL-NKSGLKPGDRVVLYYR-KCEAIEFLISLFGCFLLGIVAVPLSELSSSEELKDIVNPTPERVALTT 206 (1363)
T ss_pred HHHHHhh--ccHHh-hccCCCCCcEEEEEEE-hhhhhHHhhhhccccccceeeccchhhhhhhhhhcccCCCccceEeeh
Confidence 4445555 66 66 8889999999999988 55 99999999999999999999999999999999999999999999
Q ss_pred CCCcccCCCCCcEEEe-cCchhhhhhccCcccccccCCCCCCCCCCeEEEEccCCCCCCccceecchHHHHHHHHHhhhh
Q 011116 88 SHTSYKLPSNLRTILM-DSPEFISLLNQNEDVADFANSNMTVYQSDPAAILYSSGTTGKVKGVLLSHLNVIAIIAGYYHV 166 (493)
Q Consensus 88 ~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~TSGTTG~pK~v~~t~~~~~~~~~~~~~~ 166 (493)
......+.....-... ....|+...+-....--.........-. ..+|-||.+++|.--+++.+|. ++.+.......
T Consensus 207 ~a~~r~~~~~~~~~s~~k~v~~w~t~~~k~~~~~~k~~~P~~~~~-~~~i~~t~s~l~~~~g~V~~~~-~~~q~r~~~~~ 284 (1363)
T KOG3628|consen 207 EAGERAFINDNSPVSLAKAVAWWKTNDFKGNYTKDKIKKPRMQLP-YGYIEFTRSPLGNLIGVVYKHK-FLPQMRVLTSI 284 (1363)
T ss_pred hhhHHHhhhccCcccHHHHHHhhhcccccceeehhhccCCceeee-eEEEEEeccchhceeeeEeecc-cccchhhhhhc
Confidence 8765544332200000 0111211111110000001111111122 8999999999999999999987 54444333222
Q ss_pred cccCCC-------------CCCCCCCcEEEEecChhHHHHH-HHHHHHHhcCCeEEEecC---CCHHHHHHHHHhcCeee
Q 011116 167 TEETDP-------------NEGPPPHPVSFFTLPMFHVFGF-FMLVRAASKGETLVFMER---FDFEKMLKAVENYRVTY 229 (493)
Q Consensus 167 ~~~~~~-------------~~~~~~~~~~~~~~pl~~~~g~-~~~~~~l~~G~~~~~~~~---~~~~~~~~~l~~~~~t~ 229 (493)
...... -...+..+.++.........|+ .+.+.+++.|.+.+.++. ..+..+.+++.+++.++
T Consensus 285 ~nt~Pa~~~~~~~~~~~~~v~~~~~~~~~l~~~~~s~~lGlilGV~~alfsg~c~i~~p~~~l~~pG~~~~l~~k~R~~~ 364 (1363)
T KOG3628|consen 285 PNTNPARFAAAFYGCLHAHVFPVPSEDVLLTNLDPSQQLGLILGVLVALFSGYCTIGCPKEVLKPPGLIANLITKYRATW 364 (1363)
T ss_pred cCcChHHHHHhhhcchhhhccccCcccceeeccCcccccchhhhhhhhhhcCceeecCchhhcCCCcchhhhhccceeEE
Confidence 221100 0111334444444444555565 678999999999998876 67889999999999999
Q ss_pred cccChHHHHHHHhcccC-----------CCCCCCCeeEEEecCCCCCHHHHHHHHHhC----CCCceecccc--------
Q 011116 230 MPVSPPLIVAFINSKLT-----------DKYDLSSLQLLGCGGAPLGKEVTLKFKEKF----PNVEIRQGYG-------- 286 (493)
Q Consensus 230 l~~~P~~~~~l~~~~~~-----------~~~~l~~lr~v~~~Ge~~~~~~~~~~~~~~----~~~~v~~~yG-------- 286 (493)
++.--..+.+......+ ...+++++|.+++..+.++++..+.....| +...+...|-
T Consensus 365 ~ltd~~~Lkq~~~ny~~~p~a~~s~~k~~t~d~sslk~C~Vtc~~vd~~~~~ivs~~wlk~lg~~~~~~~~~p~l~ll~h 444 (1363)
T KOG3628|consen 365 SLTDYAGLKQPVYNYQEDPKATLSFKKYKTPDLSSLKGCMVTCTAVDTEFQEIVSDRWLKPLGETNVKVVDFPILCLLWH 444 (1363)
T ss_pred EeecccccCcccccccCCcccccchhhccCCCccceeeeEEeeeecchHHHHHHHHhhcccccCcCcceeechhhhhhhc
Confidence 87764444333221111 124578999999999999988876665554 1111111121
Q ss_pred ---------ccccCCccccccCCC--C--------------------------CCCCCccccccCC-ceEEEEcCCCCcc
Q 011116 287 ---------LTETGGAGSRVIGPD--E--------------------------AERHGSVGRLAEL-MEAKIVDPATGEA 328 (493)
Q Consensus 287 ---------~tE~g~~~~~~~~~~--~--------------------------~~~~~~~g~p~~~-~~~~i~d~~~~~~ 328 (493)
..|.+.......... . ......++..+++ +.+.++++++.+.
T Consensus 445 Ggi~is~k~~~~~~~~~~r~p~~~~~~~~~e~ll~~~~L~~~~V~v~~e~~is~~s~kd~~~i~~g~~t~~vv~~~t~~L 524 (1363)
T KOG3628|consen 445 GGIPISFKDWMEIGTVSIRRPEQMADTLPGEGLLSKEALKLNEVEVDTEDDISSLSVKDVLCIMPGDATLAVVNPDTNQL 524 (1363)
T ss_pred CceEEEeccchhhhcccccCcccccccCccceeeeccccccceEEEcchhhhhhcCccccceecccceEEEEeCCCcccc
Confidence 223322211100000 0 0011135555554 6777889999999
Q ss_pred CCCCCceEEEEeCccccccccCCccccccccc------------CCCeeeccceEEEcCCCcEEEEcccCCeEEeCceee
Q 011116 329 LPPGQKGELWLRGPTIMKGYVGDDKATSETVH------------SEGWLKTGDLCYFDSNGFLFIVDRLKELIKYKAYQV 396 (493)
Q Consensus 329 ~~~g~~Gel~v~~~~~~~gy~~~~~~~~~~~~------------~~~~~~TgD~~~~~~~g~~~~~GR~~d~i~~~G~~i 396 (493)
|.++++|||||.+++...+|+.-+..+...|. ...|.|||-+|++.+++.+++.++.|......|...
T Consensus 525 C~~~eVGEIwVsS~~~~~~~~al~~~t~~~F~~~~~~s~~~~~~n~~FmRtGLlGFv~~gki~vl~~k~d~llq~~~~~h 604 (1363)
T KOG3628|consen 525 CKTDEVGEIWVSSNSLGKLFYALDKQTENTFKATPVESSGKPPSNVPFMRTGLLGFVHNGKIYVLGLKEDGLLQVSGWRH 604 (1363)
T ss_pred cccCcceeEEEecCCcccceeeccccccceEEeeeccccCCCCccchhhhhcceeeeeCCeEEEEEechhhhhhhhhhhh
Confidence 99999999999999999999987766666651 124789999999977665544444444444477665
Q ss_pred ChHH----------HHHHHhcCCCcceEEEEeeeCCCCCeeEEEEEEeCCCCCCCHHHHHHHHHhc---CCCCCCcc---
Q 011116 397 PPVE----------LEHLLHSNPEIADAAVIPYPDEEAGQIPMAFVVRKPGSNITEAEIMDFIAKQ---VAPYKKIR--- 460 (493)
Q Consensus 397 ~~~~----------ie~~l~~~~~v~~~~v~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~l~~~---l~~~~~p~--- 460 (493)
+..+ |+-+++..+.|.++.+|- .|.+++.++-.|. ..+++-.+++.+- +-...+..
T Consensus 605 ~~d~iv~thya~~~iktV~R~v~~VF~~saf~------~E~~~Vv~~esP~--a~e~~~~q~~~~v~q~l~~iHqv~vyC 676 (1363)
T KOG3628|consen 605 NADDIVATHYAVELIKTVMRGVIAVFDVSAFE------DEHIVVVVLESPD--ATEENSFQWMSRVFQALDSIHQVGVYC 676 (1363)
T ss_pred hhhhhHhhHHHHHHHHHHHhccceEEEEeeee------cceEEEEEEeCcc--hhhhhhhhHHHHHHHHHHHHhcccceE
Confidence 5433 455556678888888884 3333333332222 2333222222222 21111111
Q ss_pred -eEEEeccccCCCCCccchHHHHHHHhhCCCCC
Q 011116 461 -RVAFINSIPKSTAGKILRRELVTHAISGNLSK 492 (493)
Q Consensus 461 -~~~~~~~lP~t~~GK~~r~~l~~~~~~~~~~~ 492 (493)
.+..-+.||||+-|-+.-..+++.|.++++..
T Consensus 677 ilivP~~tLPrt~~~Gi~~~~~k~~F~~G~L~~ 709 (1363)
T KOG3628|consen 677 ILIVPANTLPRTPLGGIHNNECKQAFLEGSLPP 709 (1363)
T ss_pred EEEeccccCCCccccccccHHHHHHHHcCCCCc
Confidence 12223799999988899999999999999864
No 132
>PF04443 LuxE: Acyl-protein synthetase, LuxE; InterPro: IPR007534 LuxE is an acyl-protein synthetase found in bioluminescent bacteria. LuxE catalyses the formation of an acyl-protein thiolester from a fatty acid and a protein. This is the second step in the bioluminescent fatty acid reduction system, which converts tetradecanoic acid to the aldehyde substrate of the luciferase-catalysed bioluminescence reaction []. A conserved cysteine found at position 364 in Photobacterium phosphoreum LuxE (Q52100 from SWISSPROT) is thought to be acylated during the transfer of the acyl group from the synthetase subunit to the reductase. The C-terminal of the synthetase is though to act as a flexible arm to transfer acyl groups between the sites of activation and reduction []. A LuxE domain is also found in the Vibrio cholerae RBFN protein (Q06961 from SWISSPROT), which is involved in the biosynthesis of the O-antigen component 3-deoxy-L-glycero-tetronic acid. This entry represents the LuxE domain, which is found in archaeal and bacterial proteins.; GO: 0047474 long-chain fatty acid luciferin component ligase activity, 0008218 bioluminescence
Probab=99.45 E-value=9e-12 Score=118.76 Aligned_cols=231 Identities=19% Similarity=0.243 Sum_probs=147.4
Q ss_pred CCCCeEEEEccCCCCCCccceecchHHHHHHHHHhhhhcccCCCCCCCCC-CcEEEEecChhH---HHHH--HHHHHHHh
Q 011116 129 YQSDPAAILYSSGTTGKVKGVLLSHLNVIAIIAGYYHVTEETDPNEGPPP-HPVSFFTLPMFH---VFGF--FMLVRAAS 202 (493)
Q Consensus 129 ~~~~~~~i~~TSGTTG~pK~v~~t~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~pl~~---~~g~--~~~~~~l~ 202 (493)
+.+++..++.||||||.|--+.+.+..+..+...+...+.... +... .-.++...|... ..+. ......+.
T Consensus 87 ~~e~~~~~~tSSGTtG~~S~i~~D~~t~~~~~~~~~~~~~~~~---~~~~~~~~il~l~p~~~~~~~~~~~~~~~~~~~~ 163 (365)
T PF04443_consen 87 PEEEVEKVFTSSGTTGQPSRIFRDRETAERQQKSLNKIFQHFL---GPSRLPMLILDLSPSPENRNSFSARYAGILGELF 163 (365)
T ss_pred ChhhheeEEECCCCCCCCcEEEECHHHHHHHHHHHHHHHHhhc---ccccCCeEEEEecCCcccccchHHHHHHHHhhcc
Confidence 3566778899999999987778877767665544444432111 1111 122333344321 1111 23333444
Q ss_pred cCCeEEEe-cCCCHHHHHHHHH----hcCeeecccChHHHHHHHhcccCCCCC--CC-CeeEEEecC------CCCC-HH
Q 011116 203 KGETLVFM-ERFDFEKMLKAVE----NYRVTYMPVSPPLIVAFINSKLTDKYD--LS-SLQLLGCGG------APLG-KE 267 (493)
Q Consensus 203 ~G~~~~~~-~~~~~~~~~~~l~----~~~~t~l~~~P~~~~~l~~~~~~~~~~--l~-~lr~v~~~G------e~~~-~~ 267 (493)
.+....+- ..++.+.+...+. +.++..+++.|.++..++...++.+.. ++ ..+++..|| +.++ .+
T Consensus 164 ~~~~~~l~~~~ld~~~~~~~L~~~~~~~~pv~l~Gftf~~~~~~~~l~~~~~~~~L~~~s~vi~~GGwK~~~~e~v~r~e 243 (365)
T PF04443_consen 164 FGSRFALDNDELDLEGLIEALFRAEHSGEPVLLFGFTFFIWFLLDELEERGIRFRLPKGSIVIHGGGWKGRRKEAVSREE 243 (365)
T ss_pred cCceeeecCCccCHHHHHHHHHHHHhCCCCEEEECchHHHHHHHHHHHhcCCcccCCCCCEEEeCCCCCccccCccCHHH
Confidence 55564443 3367777766664 557889999999888887765544433 33 456666666 5675 68
Q ss_pred HHHHHHHhCCCC----ceeccccccccCCccccccCCCCCCCCCccccccCCceEEEEcCCCCccCCCCCceEEEEeCcc
Q 011116 268 VTLKFKEKFPNV----EIRQGYGLTETGGAGSRVIGPDEAERHGSVGRLAELMEAKIVDPATGEALPPGQKGELWLRGPT 343 (493)
Q Consensus 268 ~~~~~~~~~~~~----~v~~~yG~tE~g~~~~~~~~~~~~~~~~~~g~p~~~~~~~i~d~~~~~~~~~g~~Gel~v~~~~ 343 (493)
+.+.+.+.| |+ ++++.||+||.....+.+ ..+....| ++ +.+.||++.++++.|+.|-|.+-++.
T Consensus 244 f~~~l~~~~-Gv~~~~~i~~~ygmtEl~s~~~~~-------~~~~~~~p-~w--V~iRDp~tl~~~~~Ge~Gli~vidl~ 312 (365)
T PF04443_consen 244 FYARLQEVF-GVIPIENIYDMYGMTELNSQAYEC-------GHGHFHVP-PW--VIIRDPETLEPLPPGETGLIQVIDLA 312 (365)
T ss_pred HHHHHHHHH-CCCCHHHeeeeeeccccchhheeC-------CCCcccCC-Ce--EEEECCCCCcCCCCCCeeEEEEEccc
Confidence 888888988 65 799999999987655542 11112222 33 66779999999999999999887654
Q ss_pred ccccccCCcccccccccCCCeeeccceEEEcCC--------CcEEEEcccCC
Q 011116 344 IMKGYVGDDKATSETVHSEGWLKTGDLCYFDSN--------GFLFIVDRLKE 387 (493)
Q Consensus 344 ~~~gy~~~~~~~~~~~~~~~~~~TgD~~~~~~~--------g~~~~~GR~~d 387 (493)
... .-+...|.|+|.+..+ .++.++||.+.
T Consensus 313 ~~s--------------~p~~IlTeDlGvl~~~~~c~cr~g~~f~vlGR~~~ 350 (365)
T PF04443_consen 313 NTS--------------YPGFILTEDLGVLHGDDDCGCRKGKYFEVLGRADG 350 (365)
T ss_pred ccC--------------CCcEEEEcceeeecCCCCCCCccCCEEEEEeCCCC
Confidence 431 2345779999988654 27999999763
No 133
>PF13193 AMP-binding_C: AMP-binding enzyme C-terminal domain; PDB: 3L8C_B 2VSQ_A 3R44_A 3RG2_B 3A9U_A 3A9V_A 3NI2_A 1V26_B 1ULT_B 1V25_B ....
Probab=99.36 E-value=1.7e-12 Score=94.13 Aligned_cols=70 Identities=37% Similarity=0.646 Sum_probs=61.8
Q ss_pred HHHHHHhcCCCcceEEEEeeeCCCCCeeEEEEEEeCCCCCCCHHHHHHHHHhcCCCCCCc--ceEEEecc-ccCCCCCc
Q 011116 400 ELEHLLHSNPEIADAAVIPYPDEEAGQIPMAFVVRKPGSNITEAEIMDFIAKQVAPYKKI--RRVAFINS-IPKSTAGK 475 (493)
Q Consensus 400 ~ie~~l~~~~~v~~~~v~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~l~~~l~~~~~p--~~~~~~~~-lP~t~~GK 475 (493)
|||++|.++|+|.+|+|++.+++..|+.+++++++ +.++++++++++|++|++| ..++.+++ ||+|++||
T Consensus 1 EIE~~l~~~~~V~~~~V~~~~d~~~g~~l~a~vv~------~~~~i~~~~~~~l~~~~~P~~~~~v~~~~~lP~t~~GK 73 (73)
T PF13193_consen 1 EIESVLRQHPGVAEAAVVGVPDEDWGERLVAFVVL------DEEEIRDHLRDKLPPYMVPRRIRFVRLDEELPRTPSGK 73 (73)
T ss_dssp HHHHHHHTSTTEEEEEEEEEEETTTEEEEEEEEEE------HHHHHHHHHHHHS-GGGS-SEEEEEEESSSEEBETTSS
T ss_pred CHHHHHhcCCCccEEEEEEEEcccccccceeEEEe------eecccccchhhhCCCcceeeEEEEccccCcCCCCCCCC
Confidence 79999999999999999999999889999999998 4599999999999999999 45555577 99999998
No 134
>PF03321 GH3: GH3 auxin-responsive promoter; InterPro: IPR004993 Transcription of the gene family, GH3, has been shown to be specifically induced by the plant hormone auxin. The auxin-responsive GH3 gene promoter is composed of multiple auxin response elements (AuxREs), and each AuxRE contributes incrementally to the strong auxin inducibility to the promoter.; PDB: 4EPL_A 4EQ4_B 4EWV_B 4EQL_B 4EPM_A.
Probab=98.71 E-value=5.6e-08 Score=98.39 Aligned_cols=176 Identities=20% Similarity=0.230 Sum_probs=100.5
Q ss_pred CCCeeEEEecCCCCCHHHHHHHHHhCCCCceec-cccccccCCccccccCCCCCCCCCccccccCC-ceEEEEcCCC---
Q 011116 251 LSSLQLLGCGGAPLGKEVTLKFKEKFPNVEIRQ-GYGLTETGGAGSRVIGPDEAERHGSVGRLAEL-MEAKIVDPAT--- 325 (493)
Q Consensus 251 l~~lr~v~~~Ge~~~~~~~~~~~~~~~~~~v~~-~yG~tE~g~~~~~~~~~~~~~~~~~~g~p~~~-~~~~i~d~~~--- 325 (493)
+++++.|.+.+..-...-.+.+++.+|+..+.. .|++||+- +... ... .. ..+...++ ...+-++.++
T Consensus 266 WP~L~~v~~~~~g~~~~y~~~l~~~~g~~~~~~~~y~ASEg~-i~i~-~~~---~~--~~~~l~~~~~ffEFip~~~~~~ 338 (528)
T PF03321_consen 266 WPNLKLVSCWGGGSMAPYAPKLREYFGGVPIQSKGYGASEGF-IGIP-LDP---ED--PGYVLAPDSGFFEFIPVDEDEQ 338 (528)
T ss_dssp STT--EEEEE-SGGGGGGHHHHHHHHTTS-EEE-EEEETTEE-EEEE-S-C---CC----EEE-TTSSEEEEEE-STT--
T ss_pred CCCCcEEEEEcCCChHHHHHHHHHHcCCCceeeccccccceE-EEEe-cCC---CC--CceEeecCCeEEEEEeccCCcc
Confidence 678997666555555566778888887766554 69999963 3332 111 01 11222222 2444444222
Q ss_pred -----Cc-----cCCCCCceEEEEeCccccccccCCcccccccccCCCe--eeccceEEEcC--CC--cEEEEcccCCeE
Q 011116 326 -----GE-----ALPPGQKGELWLRGPTIMKGYVGDDKATSETVHSEGW--LKTGDLCYFDS--NG--FLFIVDRLKELI 389 (493)
Q Consensus 326 -----~~-----~~~~g~~Gel~v~~~~~~~gy~~~~~~~~~~~~~~~~--~~TgD~~~~~~--~g--~~~~~GR~~d~i 389 (493)
.+ .+..|+.-||+++.. .|. |+.||++++.. ++ .+.|.||.+.++
T Consensus 339 ~~~~~~~~l~~~ele~G~~YelviTt~-------------------~GLyRY~iGDvVrv~gf~~~~P~i~F~~R~~~~l 399 (528)
T PF03321_consen 339 NPSEQPKTLLLHELEVGEEYELVITTN-------------------SGLYRYRIGDVVRVTGFYNQTPRIEFVGRRGQVL 399 (528)
T ss_dssp -----SSSEEGGG--TT-EEEEEEEST-------------------TS-SSEEECEEEEEEEEETTEEEEEEEEETTEEE
T ss_pred cccCCCceecHHHhcCCCeEEEEEecc-------------------cceeeeecCCEEEEeeccCCCcEEEEeccCCcee
Confidence 11 345688889999852 332 89999999953 34 799999999999
Q ss_pred EeCceeeChHHHHHHHhcC-----CCcceEEEEeeeCCCCCeeEEEEEEeCCCCCCCHHHHHHHHHhcC
Q 011116 390 KYKAYQVPPVELEHLLHSN-----PEIADAAVIPYPDEEAGQIPMAFVVRKPGSNITEAEIMDFIAKQV 453 (493)
Q Consensus 390 ~~~G~~i~~~~ie~~l~~~-----~~v~~~~v~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~l~~~l 453 (493)
++.|++++-.+|+.++.+. -.+.++.+...........-+.++++... ..+.+.+.+.+.+.|
T Consensus 400 ~l~gEkl~e~~v~~av~~~~~~~~~~~~~f~~~~~~~~~~~~~Y~~~~e~~~~-~~~~~~~~~~lD~~L 467 (528)
T PF03321_consen 400 SLFGEKLSEEQVQEAVARALQETGLELRDFTVAPDPSSGNPPHYVLFWELEGE-PDDLEELAKALDESL 467 (528)
T ss_dssp -SSS--EEHHHHHHHHHHHHHCTT-EEEEEEEEEE--SSSSBEEEEEEEECS--HHHHHHHHHHHHHCS
T ss_pred ecceeecCHHHHHHHHHHHHHhcCCceeeEEEEeecccCCCCceEEEEEeCCC-chHHHHHHHHHHHHh
Confidence 9999999999999999875 33566777665322233344566666544 223345666666655
No 135
>PLN02249 indole-3-acetic acid-amido synthetase
Probab=98.38 E-value=0.00016 Score=73.83 Aligned_cols=131 Identities=12% Similarity=0.180 Sum_probs=81.8
Q ss_pred CCC---eeEEEecCCCCCHHHHHHHHHhCCCCc-eeccccccccCCccccccCCCCCCCCCccccc--cCCceEEEEcCC
Q 011116 251 LSS---LQLLGCGGAPLGKEVTLKFKEKFPNVE-IRQGYGLTETGGAGSRVIGPDEAERHGSVGRL--AELMEAKIVDPA 324 (493)
Q Consensus 251 l~~---lr~v~~~Ge~~~~~~~~~~~~~~~~~~-v~~~yG~tE~g~~~~~~~~~~~~~~~~~~g~p--~~~~~~~i~d~~ 324 (493)
+++ +.+++.||-. .-...++..+++.. +...|++||+- ++.. .. ....+...+.. ..+...+-++-+
T Consensus 301 WPnl~~i~~~~~G~~~---~Y~~~l~~~~g~~~~~~~~Y~ASEg~-~gi~-~~--~~~~p~~~~~~l~~~~~ffEFiP~~ 373 (597)
T PLN02249 301 WPNTKYLDVIVTGAMA---QYIPMLEYYSGGLPMASTIYASSESY-FGIN-LN--PMCKPSEVSYTIMPNMAYFEFLPHN 373 (597)
T ss_pred CCCCCeEEEEecCChH---HHHHHHHHHcCCCccccccccccceE-EEee-cC--CCCCCCCcceEecCCcEEEEeeecc
Confidence 466 5555555533 55566777676665 45579999963 2222 11 11111112221 224455555311
Q ss_pred C-C-------c-----cCCCCCceEEEEeCccccccccCCcccccccccCCC-e-eeccceEEEcC----CCcEEEEccc
Q 011116 325 T-G-------E-----ALPPGQKGELWLRGPTIMKGYVGDDKATSETVHSEG-W-LKTGDLCYFDS----NGFLFIVDRL 385 (493)
Q Consensus 325 ~-~-------~-----~~~~g~~Gel~v~~~~~~~gy~~~~~~~~~~~~~~~-~-~~TgD~~~~~~----~g~~~~~GR~ 385 (493)
+ + . .+..|+.-+|+++. ..| | |+.||.+++.. .-.+.|.||.
T Consensus 374 ~~~~~~~~~~~~v~l~eVe~G~~Y~lVvTT-------------------~~GLyRY~iGDvVrvtgf~~~~P~i~F~gR~ 434 (597)
T PLN02249 374 HDGDGALDETSLVELADVEVGKEYELVITT-------------------YAGLYRYRVGDILRVTGFHNSAPQFKFIRRK 434 (597)
T ss_pred cCCcccCCCCcEecHHHcCCCCeEEEEEEc-------------------ccceeEeecCCEEEEeeccCCCcEEEEEccC
Confidence 1 1 1 23567777888873 234 2 88999999953 2378999999
Q ss_pred CCeEEeCceeeChHHHHHHHhc
Q 011116 386 KELIKYKAYQVPPVELEHLLHS 407 (493)
Q Consensus 386 ~d~i~~~G~~i~~~~ie~~l~~ 407 (493)
+.++++.|+++.-.+++.+|.+
T Consensus 435 ~~~ls~~GEKl~e~~v~~Av~~ 456 (597)
T PLN02249 435 NVLLSIESDKTDEADLQKAVEN 456 (597)
T ss_pred CcceecccccCCHHHHHHHHHH
Confidence 9999999999999999998887
No 136
>PLN02620 indole-3-acetic acid-amido synthetase
Probab=98.25 E-value=0.00013 Score=73.77 Aligned_cols=135 Identities=13% Similarity=0.095 Sum_probs=86.0
Q ss_pred CCCeeEEEecCCCCCHHHHHHHHHhCCCCceec-cccccccCCccccccCCCCCCCCC-ccccccCCc-eEEEEc--CCC
Q 011116 251 LSSLQLLGCGGAPLGKEVTLKFKEKFPNVEIRQ-GYGLTETGGAGSRVIGPDEAERHG-SVGRLAELM-EAKIVD--PAT 325 (493)
Q Consensus 251 l~~lr~v~~~Ge~~~~~~~~~~~~~~~~~~v~~-~yG~tE~g~~~~~~~~~~~~~~~~-~~g~p~~~~-~~~i~d--~~~ 325 (493)
.++++.|-+....-.......++.-+++.++.. .|++||+- +... ..+ . ..+. ..+...|+. ..+-++ .++
T Consensus 303 WP~lk~I~~~~tGsm~~Y~p~L~~y~gglpl~~~~Y~ASE~~-~gin-l~P-~-~~p~~~sy~L~p~~~yFEFip~~~~~ 378 (612)
T PLN02620 303 WPNTKYVDVIVTGTMSQYIPTLDYYSNGLPLVCTMYASSECY-FGVN-LNP-L-CKPSEVSYTLIPTMAYFEFLPVHRNN 378 (612)
T ss_pred CCCCcEEEEECCCCHHHHHHHHHHHcCCCccccccccccceE-EEec-cCC-C-CCcccceeeecCCcEEEEEeeccCcc
Confidence 577887766555555666677776677887766 59999963 2222 111 1 1122 122223332 223332 111
Q ss_pred -----------------Cc-----cCCCCCceEEEEeCccccccccCCcccccccccCCCe--eeccceEEEc----CCC
Q 011116 326 -----------------GE-----ALPPGQKGELWLRGPTIMKGYVGDDKATSETVHSEGW--LKTGDLCYFD----SNG 377 (493)
Q Consensus 326 -----------------~~-----~~~~g~~Gel~v~~~~~~~gy~~~~~~~~~~~~~~~~--~~TgD~~~~~----~~g 377 (493)
++ .+..|+.-||+++. ..|. |+.||+.++. ..-
T Consensus 379 ~~~~~~~~~~~~~~~~~~~~v~l~ev~~G~~YelvvTt-------------------~~GLyRYrlGDvv~V~Gf~n~~P 439 (612)
T PLN02620 379 GVTNSISLPKSLNEKEQQELVDLVDVKLGQEYELVVTT-------------------YAGLYRYRVGDVLRVAGFKNKAP 439 (612)
T ss_pred cccccccccccccccccCccccHHHccCCCeEEEEEEe-------------------cCceEEEecCCEEEEeeecCCCc
Confidence 11 14567778888873 2332 8899999984 345
Q ss_pred cEEEEcccCCeEEeCceeeChHHHHHHHhcC
Q 011116 378 FLFIVDRLKELIKYKAYQVPPVELEHLLHSN 408 (493)
Q Consensus 378 ~~~~~GR~~d~i~~~G~~i~~~~ie~~l~~~ 408 (493)
.+.|++|.+-+..+.|++++-.++..++.+.
T Consensus 440 ~~~Fv~R~~~~lsi~gEK~tE~~l~~Av~~a 470 (612)
T PLN02620 440 QFSFICRKNVVLSIDSDKTDEVELQNAVKNA 470 (612)
T ss_pred eEEEEeecCceeecccccCCHHHHHHHHHHH
Confidence 7999999999999999999999998888763
No 137
>PLN02247 indole-3-acetic acid-amido synthetase
Probab=98.23 E-value=0.0002 Score=72.53 Aligned_cols=136 Identities=11% Similarity=0.054 Sum_probs=87.4
Q ss_pred CCCeeEEEecCCCCCHHHHHHHHHhCCCCceec-cccccccCCccccccCCCCCCCCCccccccCCc-eEEEEcCCCCc-
Q 011116 251 LSSLQLLGCGGAPLGKEVTLKFKEKFPNVEIRQ-GYGLTETGGAGSRVIGPDEAERHGSVGRLAELM-EAKIVDPATGE- 327 (493)
Q Consensus 251 l~~lr~v~~~Ge~~~~~~~~~~~~~~~~~~v~~-~yG~tE~g~~~~~~~~~~~~~~~~~~g~p~~~~-~~~i~d~~~~~- 327 (493)
+++++.|.+.-..-...-...++.-+++.++.. .|++||+- +... ..+. +......+...|+. ..+-++.++++
T Consensus 292 WP~lk~I~~~~tGsm~~Y~~~L~~y~gglpl~s~~Y~sSE~~-~gin-l~p~-~~p~~~sy~L~p~~~yFEFip~~~~~~ 368 (606)
T PLN02247 292 WPRTKYIEVIVTGSMAQYIPTLEFYSGGLPLVSTMYASSECY-FGIN-LKPL-SDPSDVSYTLLPNMAYFEFLPVDKNNG 368 (606)
T ss_pred CCCCcEEEEECCCCHHHHHHHHHHHcCCCceecccccccceE-EEec-cCcC-CCccCCceeecCCcEEEEEeecCCCcc
Confidence 577888776555555666677777777887776 69999963 2222 1111 11111222223332 33344322111
Q ss_pred ----------------------------cCCCCCceEEEEeCccccccccCCcccccccccCCCe--eeccceEEEc---
Q 011116 328 ----------------------------ALPPGQKGELWLRGPTIMKGYVGDDKATSETVHSEGW--LKTGDLCYFD--- 374 (493)
Q Consensus 328 ----------------------------~~~~g~~Gel~v~~~~~~~gy~~~~~~~~~~~~~~~~--~~TgD~~~~~--- 374 (493)
.+..|+.-||+++. ..|. |+.||+.++.
T Consensus 369 ~~~~~~~~~~~~~~~~~~~~~~~~v~l~evk~G~~YelVvTt-------------------~~GLYRYrlGDvv~V~GF~ 429 (606)
T PLN02247 369 EVIHFVQCNGTDDDDDALKEDLEIVDLVDVKVGHYYELVVTT-------------------FTGLYRYRVGDILMVTGFY 429 (606)
T ss_pred cccccccccccccccccccccCceecHHHccCCCeEEEEEEe-------------------cCceEEEecCCEEEEeeec
Confidence 23567777888873 2332 8899999984
Q ss_pred -CCCcEEEEcccCCeEEeCceeeChHHHHHHHhcC
Q 011116 375 -SNGFLFIVDRLKELIKYKAYQVPPVELEHLLHSN 408 (493)
Q Consensus 375 -~~g~~~~~GR~~d~i~~~G~~i~~~~ie~~l~~~ 408 (493)
..-.+.|++|.+.+..+.|++++-.++..++.+.
T Consensus 430 n~~P~~~Fv~R~~~vlsi~gEK~tE~~l~~Av~~a 464 (606)
T PLN02247 430 NNAPQFRFVQRRNVVLSIDTDKTNEEDLLKAVTQA 464 (606)
T ss_pred CCCceEEEEecCCceeecccccCCHHHHHHHHHHH
Confidence 3458999999999999999999999998888763
No 138
>PF14535 AMP-binding_C_2: AMP-binding enzyme C-terminal domain; PDB: 2Y27_A 2Y4N_A 3QOV_B 3S89_D 3LAX_A 2Y4O_B.
Probab=97.85 E-value=4.6e-05 Score=58.20 Aligned_cols=81 Identities=21% Similarity=0.334 Sum_probs=49.7
Q ss_pred ceeeChHHHHHHHhcCCCcc-eEEEEeeeCCCCCeeEEEEEEeCCCCCC---CH----HHHHHHHHhcCCCCCCcceEEE
Q 011116 393 AYQVPPVELEHLLHSNPEIA-DAAVIPYPDEEAGQIPMAFVVRKPGSNI---TE----AEIMDFIAKQVAPYKKIRRVAF 464 (493)
Q Consensus 393 G~~i~~~~ie~~l~~~~~v~-~~~v~~~~~~~~~~~~~~~v~~~~~~~~---~~----~~l~~~l~~~l~~~~~p~~~~~ 464 (493)
|.+++|.+||++|.++|++. +++++ +..+...+.+.+.+++.++... +. +++.+.+++++.- -..+.+
T Consensus 1 GvnvfP~~Ie~vl~~~~~~~~~y~i~-v~~~~~~D~l~v~vE~~~~~~~~~~~~~~l~~~i~~~lk~~lgv---~~~V~l 76 (96)
T PF14535_consen 1 GVNVFPSQIEEVLREFPEVSPEYQIV-VTREGGLDELTVRVELRPGFSDDAEDLEALAERIAERLKERLGV---RPEVEL 76 (96)
T ss_dssp TEEE-HHHHHHHHCTSTTEEEEEEEE-EEEETTEEEEEEEEEESTTCCTTHHHHHHHHHHHHHHHHHHHSS----EEEEE
T ss_pred CcEECHHHHHHHHHhCcCCCCcEEEE-EEcCCCCcEEEEEEEECCccCcchHHHHHHHHHHHHHHHhhcCc---eEEEEE
Confidence 78999999999999999999 55555 4444456777888888776432 12 3455555554422 224555
Q ss_pred e--ccccCCCCCccch
Q 011116 465 I--NSIPKSTAGKILR 478 (493)
Q Consensus 465 ~--~~lP~t~~GK~~r 478 (493)
+ .+||++ +||..|
T Consensus 77 v~~gtLpr~-~~K~~R 91 (96)
T PF14535_consen 77 VPPGTLPRS-EGKAKR 91 (96)
T ss_dssp E-TT-S----SSSS-S
T ss_pred ECCCCccCC-CCcceE
Confidence 5 589997 688765
No 139
>COG1541 PaaK Coenzyme F390 synthetase [Coenzyme metabolism]
Probab=85.57 E-value=2.2 Score=41.89 Aligned_cols=77 Identities=12% Similarity=0.068 Sum_probs=60.6
Q ss_pred cccchhhhHHHHHHhhCCCCCCCEEEEECCCCC--CcHHHHHHHHHHcCCeeccCCCCCCHHHHHHHHhhcCCeEEEEcC
Q 011116 11 ANSSARFTLSHALSKRDSLCRKTTSLTSSPLPP--STSPVLYFSLLSLGVVISPANPLSSTSEVSHQIQLSKPSIAFATS 88 (493)
Q Consensus 11 ~~~~~~~~lA~~L~~~~gl~~gd~V~l~~~~~~--~~~~~~~lA~~~~G~~~v~i~~~~~~~~l~~~l~~~~~~~il~~~ 88 (493)
-+|+..+ |+.| .-.|..+||+|..... -+ ..-+-..+|+.++|+.++|+.+. ..+.-..++++.++.+|.+++
T Consensus 116 ~~wa~~~--aR~~-~~~g~~~gd~v~~~~~-yGl~tgg~~~~~ga~rig~~vip~~~g-~~~~~~~l~~df~~tvI~~tp 190 (438)
T COG1541 116 ERWAELL--ARSL-YSAGVRKGDKVQNAYG-YGLFTGGLGLHYGAERIGATVIPISGG-NTERQLELMKDFKPTVIAATP 190 (438)
T ss_pred HHHHHHH--HHHH-HHccCCCCCEEEEEee-eccccCCchhHHHHHhhCEEEEccCCc-cHHHHHHHHHhcCCcEEEECh
Confidence 3456666 9999 7789999999988765 33 22267889999999999999874 456678899999999999997
Q ss_pred CCcc
Q 011116 89 HTSY 92 (493)
Q Consensus 89 ~~~~ 92 (493)
+..-
T Consensus 191 s~~l 194 (438)
T COG1541 191 SYLL 194 (438)
T ss_pred HHHH
Confidence 6433
No 140
>COG0399 WecE Predicted pyridoxal phosphate-dependent enzyme apparently involved in regulation of cell wall biogenesis [Cell envelope biogenesis, outer membrane]
Probab=78.00 E-value=8.7 Score=37.19 Aligned_cols=73 Identities=16% Similarity=0.028 Sum_probs=55.5
Q ss_pred cccccchhhhHHHHHHhhCCCCCCCEEEEECCCCCCcHHHHHHHHHHcCCeeccCCC-----CCCHHHHHHHHhhcCCeE
Q 011116 9 ATANSSARFTLSHALSKRDSLCRKTTSLTSSPLPPSTSPVLYFSLLSLGVVISPANP-----LSSTSEVSHQIQLSKPSI 83 (493)
Q Consensus 9 ~~~~~~~~~~lA~~L~~~~gl~~gd~V~l~~~~~~~~~~~~~lA~~~~G~~~v~i~~-----~~~~~~l~~~l~~~~~~~ 83 (493)
+.+-.|+..+|.-.| ..+++++||-|. .+ +..|+...-+++..|+.+|.+|- ..+++.++..+..- +++
T Consensus 52 ava~~sgT~AL~laL-~al~ig~GDeVI--~p--s~TfvATan~i~~~Ga~PVFvDid~~T~nid~~~ie~aIt~~-tKA 125 (374)
T COG0399 52 AVAVSSGTAALHLAL-LALAIGPGDEVI--VP--SFTFVATANAVLLVGAKPVFVDIDPDTLNIDPDLIEAAITPR-TKA 125 (374)
T ss_pred EEEecChHHHHHHHH-HhcCCCCCCEEE--ec--CCchHHHHHHHHHcCCeEEEEecCCcccCCCHHHHHHHcccC-CeE
Confidence 345567777777788 778899999544 44 88999999999999999988753 46788888888774 555
Q ss_pred EEEc
Q 011116 84 AFAT 87 (493)
Q Consensus 84 il~~ 87 (493)
|+.-
T Consensus 126 IipV 129 (374)
T COG0399 126 IIPV 129 (374)
T ss_pred EEEe
Confidence 5543
No 141
>COG1167 ARO8 Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain (MocR family) and their eukaryotic orthologs [Transcription / Amino acid transport and metabolism]
Probab=73.57 E-value=27 Score=35.25 Aligned_cols=83 Identities=16% Similarity=0.188 Sum_probs=54.2
Q ss_pred CCCCCEEEEECCCCCCcHHHHHHHHHHcCCeeccCCC---CCCHHHHHHHHhhcCCeEEEEcCCCcccCC----------
Q 011116 29 LCRKTTSLTSSPLPPSTSPVLYFSLLSLGVVISPANP---LSSTSEVSHQIQLSKPSIAFATSHTSYKLP---------- 95 (493)
Q Consensus 29 l~~gd~V~l~~~~~~~~~~~~~lA~~~~G~~~v~i~~---~~~~~~l~~~l~~~~~~~il~~~~~~~~~~---------- 95 (493)
+++||+|++=-| + |.-+.-+.-..|+.+++|+. .+.++.+...++..+++++.+.+.......
T Consensus 176 ~~pGd~v~vE~P--t--Y~~~~~~~~~~g~~~~~vp~d~~G~~~e~le~~~~~~~~k~~y~~P~~qNPtG~tms~~rR~~ 251 (459)
T COG1167 176 LDPGDTVLVEDP--T--YPGALQALEALGARVIPVPVDEDGIDPEALEEALAQWKPKAVYVTPTFQNPTGVTMSLERRKA 251 (459)
T ss_pred CCCCCEEEEcCC--C--cHHHHHHHHHcCCcEEecCCCCCCCCHHHHHHHHhhcCCcEEEECCCCCCCCCCccCHHHHHH
Confidence 568899887555 4 44444444555555554433 577999999999999999999987665332
Q ss_pred -----CCCcEEEecCchhhhhhccC
Q 011116 96 -----SNLRTILMDSPEFISLLNQN 115 (493)
Q Consensus 96 -----~~~~~~~~~~~~~~~~~~~~ 115 (493)
+...+..+.++-+.++..+.
T Consensus 252 Ll~lA~~~~~~IIEDD~y~el~~~~ 276 (459)
T COG1167 252 LLALAEKYDVLIIEDDYYGELRYDG 276 (459)
T ss_pred HHHHHHHcCCeEEeeCcchhhhcCC
Confidence 14445666655555555443
No 142
>PF00501 AMP-binding: AMP-binding enzyme; InterPro: IPR000873 A number of prokaryotic and eukaryotic enzymes, which appear to act via an ATP-dependent covalent binding of AMP to their substrate, share a region of sequence similarity [, , ]. This region is a Ser/Thr/Gly-rich domain that is further characterised by a conserved Pro-Lys-Gly triplet. The family of enzymes includes luciferase, long chain fatty acid Co-A ligase, acetyl-CoA synthetase and various other closely-related synthetases.; GO: 0003824 catalytic activity, 0008152 metabolic process; PDB: 2V7B_A 2Y4O_B 2VSQ_A 3L8C_B 1RY2_A 3KXW_A 3LNV_A 3ETC_B 3A9U_A 3A9V_A ....
Probab=71.42 E-value=33 Score=33.76 Aligned_cols=92 Identities=11% Similarity=0.002 Sum_probs=68.4
Q ss_pred CCCCCeEEEEccCCCCCCccceecchHHHHHHHHHhhhhcccCCCCCCCCCCcEEEEecChhHHHHHHHHHHHHhcCCeE
Q 011116 128 VYQSDPAAILYSSGTTGKVKGVLLSHLNVIAIIAGYYHVTEETDPNEGPPPHPVSFFTLPMFHVFGFFMLVRAASKGETL 207 (493)
Q Consensus 128 ~~~~~~~~i~~TSGTTG~pK~v~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pl~~~~g~~~~~~~l~~G~~~ 207 (493)
..++.++++. -....+|..++...+..+...+.. .|+++++++....+-.. .....+++++..|+..
T Consensus 7 ~~pd~~a~~~--------~~~~~~Ty~~l~~~v~~la~~L~~----~g~~~~~~V~i~~~n~~-~~~~~~~A~~~~G~~~ 73 (417)
T PF00501_consen 7 RYPDRIALID--------DEGRSLTYKQLYERVRKLAAALRK----LGVKKGDRVAILLPNSI-EFVVAFLACLRAGAIP 73 (417)
T ss_dssp HSTTSEEEEE--------TTTEEEEHHHHHHHHHHHHHHHHH----TTSSTTSEEEEEESSSH-HHHHHHHHHHHTT-EE
T ss_pred hCCCceEEEE--------CCCEEEEHHHHHHHHHHHhhHHHH----hCCCccccccccCCccc-eeeeeecccccccccc
Confidence 3567777776 223567888887777666665532 36788999888888753 3356788889999999
Q ss_pred EEe-cCCCHHHHHHHHHhcCeeeccc
Q 011116 208 VFM-ERFDFEKMLKAVENYRVTYMPV 232 (493)
Q Consensus 208 ~~~-~~~~~~~~~~~l~~~~~t~l~~ 232 (493)
+.. +....+++...+++.+++++++
T Consensus 74 v~l~~~~~~~~~~~~l~~~~~~~ii~ 99 (417)
T PF00501_consen 74 VPLDPSLSEDELRHILRQSGPKVIIT 99 (417)
T ss_dssp EEEETTSSHHHHHHHHHHHTESEEEE
T ss_pred cccccccccccccccccccceeEEEE
Confidence 988 4578899999999999999996
No 143
>PF01041 DegT_DnrJ_EryC1: DegT/DnrJ/EryC1/StrS aminotransferase family; InterPro: IPR000653 This entry represents a family that are probably all pyridoxal-phosphate-dependent aminotransferase enzymes with a variety of molecular functions. The family includes StsA P72454 from SWISSPROT, StsC P77952 from SWISSPROT and StsS []. The aminotransferase activity was demonstrated for purified StsC protein as the L-glutamine:scyllo-inosose aminotransferase 2.6.1.50 from EC, which catalyses the first amino transfer in the biosynthesis of the streptidine subunit of streptomycin [].; PDB: 2FNI_A 2FNU_A 2FN6_A 2PO3_A 3UWC_A 1O61_B 1O62_B 1O69_B 1B9I_A 1B9H_A ....
Probab=70.87 E-value=7.2 Score=37.94 Aligned_cols=71 Identities=17% Similarity=0.061 Sum_probs=50.1
Q ss_pred cccchhhhHHHHHHhhCCCCCCCEEEEECCCCCCcHHHHHHHHHHcCCeeccCCC-----CCCHHHHHHHHhhcCCeEEE
Q 011116 11 ANSSARFTLSHALSKRDSLCRKTTSLTSSPLPPSTSPVLYFSLLSLGVVISPANP-----LSSTSEVSHQIQLSKPSIAF 85 (493)
Q Consensus 11 ~~~~~~~~lA~~L~~~~gl~~gd~V~l~~~~~~~~~~~~~lA~~~~G~~~v~i~~-----~~~~~~l~~~l~~~~~~~il 85 (493)
+-.+.+.+|-..| ..+|+++||.|++= ...+....-|+..+|+.++.++- ..+++.+...+..-. ++|+
T Consensus 45 ~~~sgt~Al~~al-~~l~~~~gdeVi~p----~~t~~~~~~ai~~~G~~pv~~Di~~~~~~id~~~~~~~i~~~t-~ai~ 118 (363)
T PF01041_consen 45 AVSSGTSALHLAL-RALGLGPGDEVIVP----AYTFPATASAILWAGAEPVFVDIDPETLNIDPEALEKAITPKT-KAIL 118 (363)
T ss_dssp EESSHHHHHHHHH-HHTTGGTTSEEEEE----SSS-THHHHHHHHTT-EEEEE-BETTTSSB-HHHHHHHHHTTE-EEEE
T ss_pred EeCChhHHHHHHH-HhcCCCcCceEecC----CCcchHHHHHHHHhccEEEEEeccCCcCCcCHHHHHHHhccCc-cEEE
Confidence 4456677777788 77999999998874 55777888899999999888764 456788888776444 5555
Q ss_pred Ec
Q 011116 86 AT 87 (493)
Q Consensus 86 ~~ 87 (493)
..
T Consensus 119 ~~ 120 (363)
T PF01041_consen 119 VV 120 (363)
T ss_dssp EE
T ss_pred Ee
Confidence 54
No 144
>PLN02736 long-chain acyl-CoA synthetase
Probab=68.75 E-value=96 Score=32.92 Aligned_cols=103 Identities=8% Similarity=-0.003 Sum_probs=74.0
Q ss_pred eecchHHHHHHHHHhhhhcccCCCCCCCCCCcEEEEecChhHHHHHHHHHHHHhcCCeEEEe-cCCCHHHHHHHHHhcCe
Q 011116 149 VLLSHLNVIAIIAGYYHVTEETDPNEGPPPHPVSFFTLPMFHVFGFFMLVRAASKGETLVFM-ERFDFEKMLKAVENYRV 227 (493)
Q Consensus 149 v~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pl~~~~g~~~~~~~l~~G~~~~~~-~~~~~~~~~~~l~~~~~ 227 (493)
..+|...+...+..+...+.. .|+.++|++...++-..-+ ....+.++..|+..+.. +..+.+++...+++.++
T Consensus 77 ~~lTy~el~~~v~~lA~~L~~----~Gv~~gd~Vai~~~n~~e~-~~~~lA~~~~G~v~vpl~~~~~~~~l~~il~~~~~ 151 (651)
T PLN02736 77 KWMTYGEAGTARTAIGSGLVQ----HGIPKGACVGLYFINRPEW-LIVDHACSAYSYVSVPLYDTLGPDAVKFIVNHAEV 151 (651)
T ss_pred EEEEHHHHHHHHHHHHHHHHH----hCCCCCCEEEEEcCCCHHH-HHHHHHHHHcCCeEEEeecCCCHHHHHHHHhccCC
Confidence 346888887777666665532 3678999998888865533 24567888889988866 56789999999999999
Q ss_pred eecccChHHHHHHHhcccCCCCCCCCeeEEEec
Q 011116 228 TYMPVSPPLIVAFINSKLTDKYDLSSLQLLGCG 260 (493)
Q Consensus 228 t~l~~~P~~~~~l~~~~~~~~~~l~~lr~v~~~ 260 (493)
+++++.+..+..+..... .++.++.++..
T Consensus 152 ~~l~~~~~~~~~~~~~~~----~~~~l~~ii~~ 180 (651)
T PLN02736 152 AAIFCVPQTLNTLLSCLS----EIPSVRLIVVV 180 (651)
T ss_pred CEEEECHHHHHHHHHHhh----cCCCceEEEEE
Confidence 999998887666544321 23456665543
No 145
>TIGR02155 PA_CoA_ligase phenylacetate-CoA ligase. Phenylacetate-CoA ligase (PA-CoA ligase) catalyzes the first step in aromatic catabolism of phenylacetic acid (PA) into phenylacetyl-CoA (PA-CoA). Often located in a conserved gene cluster with enzymes involved in phenylacetic acid activation (paaG/H/I/J), phenylacetate-CoA ligase has been found among the proteobacteria as well as in gram positive prokaryotes. In the B-subclass proteobacterium Azoarcus evansii, phenylacetate-CoA ligase has been shown to be induced under aerobic and anaerobic growth conditions. It remains unclear however, whether this induction is due to the same enzyme or to another isoenzyme restricted to specific anaerobic growth conditions.
Probab=65.54 E-value=14 Score=36.68 Aligned_cols=68 Identities=15% Similarity=0.051 Sum_probs=50.9
Q ss_pred HHHHHhhCCCCCCCEEEEECCCCCC--cHHHHHHHHHHcCCeeccCCCCCCHHHHHHHHhhcCCeEEEEcCCC
Q 011116 20 SHALSKRDSLCRKTTSLTSSPLPPS--TSPVLYFSLLSLGVVISPANPLSSTSEVSHQIQLSKPSIAFATSHT 90 (493)
Q Consensus 20 A~~L~~~~gl~~gd~V~l~~~~~~~--~~~~~~lA~~~~G~~~v~i~~~~~~~~l~~~l~~~~~~~il~~~~~ 90 (493)
++.+ ...|+++||++....+ .+. ......+++..+|+.+++++... .+.+...+++.++.+++..++.
T Consensus 108 ~~~~-~~~g~~~~d~~~~~~~-~~~~~~~~~~~~~~~~~g~~~~~~~~~~-~~~~~~~i~~~~~t~l~~~Ps~ 177 (422)
T TIGR02155 108 ARSI-RAAGGRPGDLIHNAYG-YGLFTGGLGAHYGAEKLGCTVVPISGGQ-TEKQVQLIQDFKPDIIMVTPSY 177 (422)
T ss_pred HHHH-HHcCCCCCcEEEEccC-ccccchhHHHHHHHHHcCcEEEecCCCC-HHHHHHHHHHHCCCEEEEcHHH
Confidence 4455 5579999999987766 543 22234577889999999887654 5778899999999999988654
No 146
>cd07050 BMC_EutL_repeat2 ethanolamine utilization protein S (EutS), Bacterial Micro-Compartment (BMC) domain repeat 2. EutL proteins are homologs of the carboxysome shell protein. They are encoded within the eut operon and might be required for the formation of the outer shell of the bacterial eut polyhedral organelles which are involved in the cobalamin-dependent degradation of ethanolamine. Although it has been suggested that EutL might form hexamers and further assemble into the flat facets of the polyhedral outer shell of eut organelles at present no experimental evidence directly supports this view. EutL proteins contain two tandem BMC domains. This CD includes domain 2 (the second BMC domain of EutL).
Probab=62.45 E-value=12 Score=26.73 Aligned_cols=39 Identities=18% Similarity=0.063 Sum_probs=35.3
Q ss_pred HHHHHhhCCCCCCCEEEEECCCCCCcHHHHHHHHHHcCCe
Q 011116 20 SHALSKRDSLCRKTTSLTSSPLPPSTSPVLYFSLLSLGVV 59 (493)
Q Consensus 20 A~~L~~~~gl~~gd~V~l~~~~~~~~~~~~~lA~~~~G~~ 59 (493)
..+|++..||+.|+-++.+.. +..|.+..+=|++++.-+
T Consensus 3 GsYls~~agi~eGe~lAYLIa-pPlEa~y~lDaALKAAdV 41 (87)
T cd07050 3 GSYLSKTAGIAEGEALAYLIA-PPLEAMYGLDAALKAADV 41 (87)
T ss_pred chhhHHhcCCCCCCeeeeeec-CcHHHHHHHHHHHHhhce
Confidence 578878889999999999999 999999999999998755
No 147
>PLN02565 cysteine synthase
Probab=61.03 E-value=38 Score=32.27 Aligned_cols=61 Identities=13% Similarity=0.063 Sum_probs=48.0
Q ss_pred CC-CCCCCEEEEECCCCCCcHHHHHHHHHHcCCeeccCCCCCCHHHHHHHHhhcCCeEEEEcC
Q 011116 27 DS-LCRKTTSLTSSPLPPSTSPVLYFSLLSLGVVISPANPLSSTSEVSHQIQLSKPSIAFATS 88 (493)
Q Consensus 27 ~g-l~~gd~V~l~~~~~~~~~~~~~lA~~~~G~~~v~i~~~~~~~~l~~~l~~~~~~~il~~~ 88 (493)
.| +++|....+-.. .+-.-..+-++|..+|..++.+-|...++.-...++..+++++++++
T Consensus 60 ~g~~~~g~~~vv~aS-sGN~g~alA~~a~~~G~~~~ivvp~~~~~~k~~~i~~~GA~V~~~~~ 121 (322)
T PLN02565 60 KGLIKPGESVLIEPT-SGNTGIGLAFMAAAKGYKLIITMPASMSLERRIILLAFGAELVLTDP 121 (322)
T ss_pred cCCCCCCCcEEEEEC-CChHHHHHHHHHHHcCCeEEEEeCCCCcHHHHHHHHHcCCEEEEeCC
Confidence 35 478865444445 57777777888888999888877777788889999999999999875
No 148
>PLN03052 acetate--CoA ligase; Provisional
Probab=60.82 E-value=84 Score=33.94 Aligned_cols=101 Identities=9% Similarity=0.050 Sum_probs=72.3
Q ss_pred CCCCeEEEEccCCCCCCccceecchHHHHHHHHHhhhhcccCCCCCCCCCCcEEEEecChhHHHHHHHHHHHHhcCCeEE
Q 011116 129 YQSDPAAILYSSGTTGKVKGVLLSHLNVIAIIAGYYHVTEETDPNEGPPPHPVSFFTLPMFHVFGFFMLVRAASKGETLV 208 (493)
Q Consensus 129 ~~~~~~~i~~TSGTTG~pK~v~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pl~~~~g~~~~~~~l~~G~~~~ 208 (493)
.++.++.+....+..+.+ ...+|...+...+..+...+.. .|..++|++...+|..-- ....++.++..|+..+
T Consensus 188 ~pd~~Ai~~~~e~~~~~~-~~~~Ty~eL~~~v~~lA~~L~~----~Gv~~GdrVai~~pn~~e-~via~LA~~~~Gav~v 261 (728)
T PLN03052 188 TDDSIAIIWRDEGSDDLP-VNRMTLSELRSQVSRVANALDA----LGFEKGDAIAIDMPMNVH-AVIIYLAIILAGCVVV 261 (728)
T ss_pred CCCCeEEEEECCCCCCCc-eEEeeHHHHHHHHHHHHHHHHH----cCCCCCCEEEEEeCCCHH-HHHHHHHHHHcCCEEE
Confidence 356666655433321222 2457888887777776666543 467999999999996543 3456788888999888
Q ss_pred Ee-cCCCHHHHHHHHHhcCeeecccChH
Q 011116 209 FM-ERFDFEKMLKAVENYRVTYMPVSPP 235 (493)
Q Consensus 209 ~~-~~~~~~~~~~~l~~~~~t~l~~~P~ 235 (493)
.+ +.+..+.+...++..++.++++...
T Consensus 262 pi~p~~~~~~l~~rl~~~~~k~lit~d~ 289 (728)
T PLN03052 262 SIADSFAPSEIATRLKISKAKAIFTQDV 289 (728)
T ss_pred eeCCCCCHHHHHHHHHhcCceEEEEcCc
Confidence 77 5688999999999999999887654
No 149
>PRK11761 cysM cysteine synthase B; Provisional
Probab=60.24 E-value=39 Score=31.74 Aligned_cols=58 Identities=10% Similarity=0.065 Sum_probs=46.0
Q ss_pred CCCCCEEEEECCCCCCcHHHHHHHHHHcCCeeccCCCCCCHHHHHHHHhhcCCeEEEEcC
Q 011116 29 LCRKTTSLTSSPLPPSTSPVLYFSLLSLGVVISPANPLSSTSEVSHQIQLSKPSIAFATS 88 (493)
Q Consensus 29 l~~gd~V~l~~~~~~~~~~~~~lA~~~~G~~~v~i~~~~~~~~l~~~l~~~~~~~il~~~ 88 (493)
+++|++|+.-+. +-.-..+-++|...|..+..+-|...++.....++..+++++++..
T Consensus 60 ~~~g~~vv~aSs--GN~g~alA~~a~~~G~~~~i~~p~~~~~~k~~~~~~~GA~v~~~~~ 117 (296)
T PRK11761 60 IKPGDTLIEATS--GNTGIALAMIAAIKGYRMKLIMPENMSQERRAAMRAYGAELILVPK 117 (296)
T ss_pred CCCCCEEEEeCC--ChHHHHHHHHHHHcCCCEEEEECCCCCHHHHHHHHHcCCEEEEeCC
Confidence 578888776544 6777777788888998877776766666778899999999999985
No 150
>PRK09274 peptide synthase; Provisional
Probab=60.16 E-value=72 Score=32.91 Aligned_cols=101 Identities=12% Similarity=0.026 Sum_probs=68.7
Q ss_pred CCCCeEEEEccCCC-CCCccceecchHHHHHHHHHhhhhcccCCCCCCCCCCcEEEEecChhHHHHHHHHHHHHhcCCeE
Q 011116 129 YQSDPAAILYSSGT-TGKVKGVLLSHLNVIAIIAGYYHVTEETDPNEGPPPHPVSFFTLPMFHVFGFFMLVRAASKGETL 207 (493)
Q Consensus 129 ~~~~~~~i~~TSGT-TG~pK~v~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pl~~~~g~~~~~~~l~~G~~~ 207 (493)
.++.++.+....++ ....+...+|..++...+..+...+.. .|+.+++++...++-... ....++.++..|+..
T Consensus 19 ~p~~~a~~~~~~~~~~~~~~~~~~Ty~~l~~~~~~~A~~L~~----~g~~~gd~V~~~~~n~~~-~~~~~la~~~~G~~~ 93 (552)
T PRK09274 19 RPDQLAVAVPGGRGADGKLAYDELSFAELDARSDAIAHGLNA----AGIGRGMRAVLMVTPSLE-FFALTFALFKAGAVP 93 (552)
T ss_pred CCCcceEEeccCCCCccccccCcccHHHHHHHHHHHHHHHHH----cCCCCCCEEEEEeCCcHH-HHHHHHHHHHcCeEE
Confidence 34555655433222 122233368888887777766666543 367899999998876543 235678889999988
Q ss_pred EEec-CCCHHHHHHHHHhcCeeecccCh
Q 011116 208 VFME-RFDFEKMLKAVENYRVTYMPVSP 234 (493)
Q Consensus 208 ~~~~-~~~~~~~~~~l~~~~~t~l~~~P 234 (493)
+..+ ....+++...+++.++..++..+
T Consensus 94 v~l~~~~~~~~l~~~l~~~~~~~~i~~~ 121 (552)
T PRK09274 94 VLVDPGMGIKNLKQCLAEAQPDAFIGIP 121 (552)
T ss_pred EEcCCCccHHHHHHHHHhcCCCEEEecc
Confidence 8774 56788899999999998887754
No 151
>TIGR03335 F390_ftsA coenzyme F390 synthetase. This enzyme, characterized in Methanobacterium thermoautotrophicum and found in several other methanogens, modifies coenzyme F420 by ligation of AMP (or GMP) from ATP (or GTP). On F420, it activates an aromatic hydroxyl group, which is unusual chemistry for an adenylyltransferase. This enzyme name has been attached to numbers of uncharacterized genes likely to instead act as phenylacetate CoA ligase, based on proximity to predicted indolepyruvate ferredoxin oxidoreductase (1.2.7.8) genes. The enzyme acts during transient exposure of the organism to oxygen.
Probab=59.22 E-value=40 Score=33.87 Aligned_cols=64 Identities=9% Similarity=0.109 Sum_probs=46.1
Q ss_pred HHHHHhhCCCCCCCEEEEECCCCCCcH--HHHHHHHHHcCCeeccCCCCCCHHHHHHHHhhcCCeEEEEcC
Q 011116 20 SHALSKRDSLCRKTTSLTSSPLPPSTS--PVLYFSLLSLGVVISPANPLSSTSEVSHQIQLSKPSIAFATS 88 (493)
Q Consensus 20 A~~L~~~~gl~~gd~V~l~~~~~~~~~--~~~~lA~~~~G~~~v~i~~~~~~~~l~~~l~~~~~~~il~~~ 88 (493)
++.+ ...|+++||++.+..+ -+... ....+++..+|+.+++... .+....+++..++.+++..+
T Consensus 119 ~r~~-~~~G~~~gD~vl~~~~-~~~~~g~~~~~~~~~~~Ga~vi~~~~---~~~~~~~i~~~~~t~l~~~p 184 (445)
T TIGR03335 119 ARSF-VSQGFTAGDRMVICAS-YGMNVGANTMTLAAREVGMSIIPEGK---CTFPIRIIESYRPTGIVASV 184 (445)
T ss_pred HHHH-HHcCCCCCCeEEEEec-CCcchhHHHHHHHHHHcCCEEEcCCc---hhHHHHHHHHhCCCEEEECH
Confidence 4455 5579999999999887 66432 3455788899999887653 23456778888998887654
No 152
>PRK02261 methylaspartate mutase subunit S; Provisional
Probab=59.07 E-value=97 Score=25.21 Aligned_cols=94 Identities=19% Similarity=0.161 Sum_probs=56.6
Q ss_pred hhHHHHH-HHHHHHHhcCCeEEEec-CCCHHHHHHHHHhcCeeecccCh------HHHHHHHhcccCCCCCCCCeeEEEe
Q 011116 188 MFHVFGF-FMLVRAASKGETLVFME-RFDFEKMLKAVENYRVTYMPVSP------PLIVAFINSKLTDKYDLSSLQLLGC 259 (493)
Q Consensus 188 l~~~~g~-~~~~~~l~~G~~~~~~~-~~~~~~~~~~l~~~~~t~l~~~P------~~~~~l~~~~~~~~~~l~~lr~v~~ 259 (493)
-.|..|. ......-..|..++... ..+++++.+.+.+++++++..+- ..+..+++..++.. ++.+ .+++
T Consensus 14 D~H~lG~~iv~~~lr~~G~eVi~LG~~vp~e~i~~~a~~~~~d~V~lS~~~~~~~~~~~~~~~~L~~~~--~~~~-~i~v 90 (137)
T PRK02261 14 DCHAVGNKILDRALTEAGFEVINLGVMTSQEEFIDAAIETDADAILVSSLYGHGEIDCRGLREKCIEAG--LGDI-LLYV 90 (137)
T ss_pred ChhHHHHHHHHHHHHHCCCEEEECCCCCCHHHHHHHHHHcCCCEEEEcCccccCHHHHHHHHHHHHhcC--CCCC-eEEE
Confidence 3777777 44444556788888774 56789999999999998866553 12344444433322 3344 4566
Q ss_pred cCCCC-----CHHHHHHHHHhCCCCceecccccc
Q 011116 260 GGAPL-----GKEVTLKFKEKFPNVEIRQGYGLT 288 (493)
Q Consensus 260 ~Ge~~-----~~~~~~~~~~~~~~~~v~~~yG~t 288 (493)
||... +.+..+.+++. | +-..|++.
T Consensus 91 GG~~~~~~~~~~~~~~~l~~~--G--~~~vf~~~ 120 (137)
T PRK02261 91 GGNLVVGKHDFEEVEKKFKEM--G--FDRVFPPG 120 (137)
T ss_pred ECCCCCCccChHHHHHHHHHc--C--CCEEECcC
Confidence 66543 34555566664 4 34445533
No 153
>TIGR03089 conserved hypothetical protein TIGR03089. This protein family is found, so far, only in the Actinobacteria (Streptomyces, Mycobacterium, Corynebacterium, Nocardia, Propionibacterium, etc.) and never more than one to a genome. Members show twilight-level sequence similarity to family of AMP-binding enzymes described by Pfam model pfam00501.
Probab=58.24 E-value=26 Score=31.43 Aligned_cols=54 Identities=7% Similarity=-0.005 Sum_probs=42.9
Q ss_pred hhCCCCCCCEEEEECCCCCCc--HHHHHHHHHHcCCeeccCCCCCCHHHHHHHHhhcCC
Q 011116 25 KRDSLCRKTTSLTSSPLPPST--SPVLYFSLLSLGVVISPANPLSSTSEVSHQIQLSKP 81 (493)
Q Consensus 25 ~~~gl~~gd~V~l~~~~~~~~--~~~~~lA~~~~G~~~v~i~~~~~~~~l~~~l~~~~~ 81 (493)
...|++++|++. .+| -.-- +...+++++..|++.+.+ +.++++.+...+++.++
T Consensus 171 ~~~~l~~~D~~l-~~P-l~H~~gl~~~~~~~l~~G~t~v~~-~rFd~~~~l~~i~~~~v 226 (227)
T TIGR03089 171 RAAGLPPGDRVL-VLA-WTDLEDFLATLLAPLAAGGSLVLV-THPDPARLDQIAETERV 226 (227)
T ss_pred hhcCCCCCCeEE-ecC-CCchHHHHHHHHHHhccCceEEEe-cCCCHHHHHHHHHhhcC
Confidence 346899999999 888 4432 234688999999998877 69999999999988765
No 154
>PLN03013 cysteine synthase
Probab=57.48 E-value=40 Score=33.49 Aligned_cols=61 Identities=15% Similarity=0.085 Sum_probs=47.2
Q ss_pred CCCCCCEEEEECCCCCCcHHHHHHHHHHcCCeeccCCCCCCHHHHHHHHhhcCCeEEEEcCC
Q 011116 28 SLCRKTTSLTSSPLPPSTSPVLYFSLLSLGVVISPANPLSSTSEVSHQIQLSKPSIAFATSH 89 (493)
Q Consensus 28 gl~~gd~V~l~~~~~~~~~~~~~lA~~~~G~~~v~i~~~~~~~~l~~~l~~~~~~~il~~~~ 89 (493)
.+++|....+-.. .+-.-..+-++|...|..++.+-|...++.....++..+++++++++.
T Consensus 170 ~l~pG~~~VVeaS-SGN~G~ALA~~a~~~G~~~~VvvP~~~s~~K~~~ira~GAeVi~v~~~ 230 (429)
T PLN03013 170 FISPGKSVLVEPT-SGNTGIGLAFIAASRGYRLILTMPASMSMERRVLLKAFGAELVLTDPA 230 (429)
T ss_pred CcCCCCcEEEEEC-CcHHHHHHHHHHHHcCCCEEEEECCCCcHHHHHHHHHcCCEEEEECCC
Confidence 3588865455555 677777778888889988777767667777889999999999998754
No 155
>PTZ00237 acetyl-CoA synthetase; Provisional
Probab=56.03 E-value=99 Score=32.82 Aligned_cols=97 Identities=9% Similarity=0.114 Sum_probs=70.3
Q ss_pred CCCeEEEEccCCCCCCccceecchHHHHHHHHHhhhhcccCCCCCCCCCCcEEEEecChhHHHHHHHHHHHHhcCCeEEE
Q 011116 130 QSDPAAILYSSGTTGKVKGVLLSHLNVIAIIAGYYHVTEETDPNEGPPPHPVSFFTLPMFHVFGFFMLVRAASKGETLVF 209 (493)
Q Consensus 130 ~~~~~~i~~TSGTTG~pK~v~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pl~~~~g~~~~~~~l~~G~~~~~ 209 (493)
++.++.+....+ .+ ....+|...+...+..+...+.. .|++++|++...+|..--. ...++.++..|+..+.
T Consensus 75 ~~~~A~~~~~~~-~~--~~~~~Ty~eL~~~v~~lA~~L~~----~Gv~~GDrV~i~~~n~~e~-~~~~lA~~~~Gav~vp 146 (647)
T PTZ00237 75 RDQDALIYECPY-LK--KTIKLTYYQLYEKVCEFSRVLLN----LNISKNDNVLIYMANTLEP-LIAMLSCARIGATHCV 146 (647)
T ss_pred CCceEEEEEcCC-CC--ceEEEEHHHHHHHHHHHHHHHHH----cCCCCCCEEEEECCCCHHH-HHHHHHHHHhCcEEEe
Confidence 456665543221 11 12468888888777776666543 4779999999999976543 3567788889998877
Q ss_pred e-cCCCHHHHHHHHHhcCeeecccCh
Q 011116 210 M-ERFDFEKMLKAVENYRVTYMPVSP 234 (493)
Q Consensus 210 ~-~~~~~~~~~~~l~~~~~t~l~~~P 234 (493)
. +.+..+++...++..+++++++..
T Consensus 147 l~~~~~~~~l~~~l~~~~~~~li~~~ 172 (647)
T PTZ00237 147 LFDGYSVKSLIDRIETITPKLIITTN 172 (647)
T ss_pred eCCCCCHHHHHHHHHhcCCCEEEEcc
Confidence 6 568899999999999999988754
No 156
>PLN02387 long-chain-fatty-acid-CoA ligase family protein
Probab=55.98 E-value=1.1e+02 Score=32.85 Aligned_cols=104 Identities=10% Similarity=0.038 Sum_probs=74.8
Q ss_pred eecchHHHHHHHHHhhhhcccCCCCCCCCCCcEEEEecChhHHHHHHHHHHHHhcCCeEEEe-cCCCHHHHHHHHHhcCe
Q 011116 149 VLLSHLNVIAIIAGYYHVTEETDPNEGPPPHPVSFFTLPMFHVFGFFMLVRAASKGETLVFM-ERFDFEKMLKAVENYRV 227 (493)
Q Consensus 149 v~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pl~~~~g~~~~~~~l~~G~~~~~~-~~~~~~~~~~~l~~~~~ 227 (493)
..+|...+...+..+...+.. .|+.+++++...++-..-+ ....++++..|+..+.. .....+++...+++.++
T Consensus 105 ~~~Ty~el~~~v~~lA~~L~~----lG~~~gd~Vai~~~n~~e~-~~~~lA~~~~G~v~vpl~~~~~~~~l~~il~~s~~ 179 (696)
T PLN02387 105 EWITYGQVFERVCNFASGLVA----LGHNKEERVAIFADTRAEW-LIALQGCFRQNITVVTIYASLGEEALCHSLNETEV 179 (696)
T ss_pred EEEEHHHHHHHHHHHHHHHHH----hCCCCCCEEEEEcCCCHHH-HHHHHHHHHcCCeEEEecCCCCHHHHHHHHHccCC
Confidence 457888887777666655432 3678999999888865532 35677788899988866 56789999999999999
Q ss_pred eecccChHHHHHHHhcccCCCCCCCCeeEEEecC
Q 011116 228 TYMPVSPPLIVAFINSKLTDKYDLSSLQLLGCGG 261 (493)
Q Consensus 228 t~l~~~P~~~~~l~~~~~~~~~~l~~lr~v~~~G 261 (493)
.++++....+..+.+... .++.++.+++-+
T Consensus 180 ~~li~~~~~~~~l~~~~~----~~~~l~~ii~~~ 209 (696)
T PLN02387 180 TTVICDSKQLKKLIDISS----QLETVKRVIYMD 209 (696)
T ss_pred CEEEECHHHHHHHHHHhh----ccCCceEEEEEC
Confidence 999998877776655321 234566655544
No 157
>TIGR01138 cysM cysteine synthase B. Alternate name: O-acetylserine (thiol)-lyase
Probab=55.92 E-value=55 Score=30.62 Aligned_cols=58 Identities=10% Similarity=0.055 Sum_probs=45.2
Q ss_pred CCCCCEEEEECCCCCCcHHHHHHHHHHcCCeeccCCCCCCHHHHHHHHhhcCCeEEEEcC
Q 011116 29 LCRKTTSLTSSPLPPSTSPVLYFSLLSLGVVISPANPLSSTSEVSHQIQLSKPSIAFATS 88 (493)
Q Consensus 29 l~~gd~V~l~~~~~~~~~~~~~lA~~~~G~~~v~i~~~~~~~~l~~~l~~~~~~~il~~~ 88 (493)
+++|+.|+--+ .+-.-..+-++|.+.|..+..+-|...++.-...++..++++++++.
T Consensus 56 ~~~g~~vv~aS--sGN~g~alA~~a~~~G~~~~i~~p~~~~~~k~~~~~~~GA~v~~v~~ 113 (290)
T TIGR01138 56 IKPGDVLIEAT--SGNTGIALAMIAALKGYRMKLLMPDNMSQERKAAMRAYGAELILVTK 113 (290)
T ss_pred CCCCCEEEEEC--CChHHHHHHHHHHHcCCeEEEEECCCCCHHHHHHHHHcCCEEEEeCC
Confidence 47888877654 47777777788888998877776766666677899999999999874
No 158
>TIGR02370 pyl_corrinoid methyltransferase cognate corrinoid proteins, Methanosarcina family. This model describes a subfamily of the B12 binding domain (pfam02607, pfam02310) proteins. Members of the seed alignment include corrinoid proteins specific to four different, mutally non-homologous enzymes of the genus Methanosarcina. Three of the four cognate enzymes (trimethylamine, dimethylamine, and monomethylamine methyltransferases) all have the unusual, ribosomally incorporated amino acid pyrrolysine at the active site. All act in systems in which a methyl group is transferred to the corrinoid protein to create methylcobalamin, from which the methyl group is later transferred elsewhere.
Probab=55.88 E-value=1.4e+02 Score=26.05 Aligned_cols=88 Identities=13% Similarity=0.151 Sum_probs=54.1
Q ss_pred EEEEecCh--hHHHHH-HHHHHHHhcCCeEEEe-cCCCHHHHHHHHHhcCeeecccChH------HHHHHHhcccCCCCC
Q 011116 181 VSFFTLPM--FHVFGF-FMLVRAASKGETLVFM-ERFDFEKMLKAVENYRVTYMPVSPP------LIVAFINSKLTDKYD 250 (493)
Q Consensus 181 ~~~~~~pl--~~~~g~-~~~~~~l~~G~~~~~~-~~~~~~~~~~~l~~~~~t~l~~~P~------~~~~l~~~~~~~~~~ 250 (493)
+++..++- .|..|. ......-..|-.++.. ...+++++.+.+++.+|+++.++-+ .+..+++..++.+.
T Consensus 86 ~vv~~t~~gd~H~lG~~~v~~~l~~~G~~vi~LG~~vp~e~~v~~~~~~~pd~v~lS~~~~~~~~~~~~~i~~l~~~~~- 164 (197)
T TIGR02370 86 KVVCGVAEGDVHDIGKNIVVTMLRANGFDVIDLGRDVPIDTVVEKVKKEKPLMLTGSALMTTTMYGQKDINDKLKEEGY- 164 (197)
T ss_pred eEEEEeCCCchhHHHHHHHHHHHHhCCcEEEECCCCCCHHHHHHHHHHcCCCEEEEccccccCHHHHHHHHHHHHHcCC-
Confidence 44444443 777787 3444445577777766 5678899999999999998665532 23444444333221
Q ss_pred CCCeeEEEecCCCCCHHHHH
Q 011116 251 LSSLQLLGCGGAPLGKEVTL 270 (493)
Q Consensus 251 l~~lr~v~~~Ge~~~~~~~~ 270 (493)
.+.+ .+++||.++.+++.+
T Consensus 165 ~~~v-~i~vGG~~~~~~~~~ 183 (197)
T TIGR02370 165 RDSV-KFMVGGAPVTQDWAD 183 (197)
T ss_pred CCCC-EEEEEChhcCHHHHH
Confidence 1223 377799888775433
No 159
>PLN02556 cysteine synthase/L-3-cyanoalanine synthase
Probab=55.14 E-value=43 Score=32.61 Aligned_cols=59 Identities=12% Similarity=0.091 Sum_probs=46.1
Q ss_pred CCCCCEEEEECCCCCCcHHHHHHHHHHcCCeeccCCCCCCHHHHHHHHhhcCCeEEEEcC
Q 011116 29 LCRKTTSLTSSPLPPSTSPVLYFSLLSLGVVISPANPLSSTSEVSHQIQLSKPSIAFATS 88 (493)
Q Consensus 29 l~~gd~V~l~~~~~~~~~~~~~lA~~~~G~~~v~i~~~~~~~~l~~~l~~~~~~~il~~~ 88 (493)
+++|....+-.. .+-.-..+-++|...|..+..+-|...+..-...++..+++++++++
T Consensus 107 i~pG~~~vV~aS-sGN~G~alA~~a~~~G~~~~ivvp~~~~~~k~~~lr~~GA~Vi~~~~ 165 (368)
T PLN02556 107 ITPGKTTLIEPT-SGNMGISLAFMAAMKGYKMILTMPSYTSLERRVTMRAFGAELVLTDP 165 (368)
T ss_pred cCCCCCEEEEeC-CchHHHHHHHHHHHcCCCEEEEECCCCCHHHHHHHHHcCCEEEEECC
Confidence 678854444455 67777888888899998877777766667778999999999999874
No 160
>PLN02654 acetate-CoA ligase
Probab=54.59 E-value=1.1e+02 Score=32.61 Aligned_cols=99 Identities=11% Similarity=0.100 Sum_probs=70.8
Q ss_pred CCCCeEEEEccCCCCCCccceecchHHHHHHHHHhhhhcccCCCCCCCCCCcEEEEecChhHHHHHHHHHHHHhcCCeEE
Q 011116 129 YQSDPAAILYSSGTTGKVKGVLLSHLNVIAIIAGYYHVTEETDPNEGPPPHPVSFFTLPMFHVFGFFMLVRAASKGETLV 208 (493)
Q Consensus 129 ~~~~~~~i~~TSGTTG~pK~v~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pl~~~~g~~~~~~~l~~G~~~~ 208 (493)
.++.++.+..... .+ ....+|...+...+..+...+.. .|.+++|++...+|..-- ....++.++..|+..+
T Consensus 102 ~~~~~Al~~~~~~-~~--~~~~~Ty~eL~~~v~~lA~~L~~----~Gv~~GdrV~i~~pn~~e-~v~a~lA~~~~Gav~v 173 (666)
T PLN02654 102 NGDKIAIYWEGNE-PG--FDASLTYSELLDRVCQLANYLKD----VGVKKGDAVVIYLPMLME-LPIAMLACARIGAVHS 173 (666)
T ss_pred CCCCEEEEEEcCC-CC--ceEEEeHHHHHHHHHHHHHHHHH----cCCCCCCEEEEEcCCCHH-HHHHHHHHHHcCCEEE
Confidence 3566666542221 11 12457888888777776666543 467899999999887552 2357788889999888
Q ss_pred Ee-cCCCHHHHHHHHHhcCeeecccChH
Q 011116 209 FM-ERFDFEKMLKAVENYRVTYMPVSPP 235 (493)
Q Consensus 209 ~~-~~~~~~~~~~~l~~~~~t~l~~~P~ 235 (493)
.. +.+..+.+...++..++.++++...
T Consensus 174 pv~~~~~~~~l~~~l~~~~~~~li~~~~ 201 (666)
T PLN02654 174 VVFAGFSAESLAQRIVDCKPKVVITCNA 201 (666)
T ss_pred ecCCCCCHHHHHHHHHhcCceEEEEcCc
Confidence 76 5688999999999999999887654
No 161
>PRK07529 AMP-binding domain protein; Validated
Probab=54.04 E-value=85 Score=33.19 Aligned_cols=99 Identities=13% Similarity=0.092 Sum_probs=67.5
Q ss_pred CCCCeEEEEccCCCCCCccceecchHHHHHHHHHhhhhcccCCCCCCCCCCcEEEEecChhHHHHHHHHHHHHhcCCeEE
Q 011116 129 YQSDPAAILYSSGTTGKVKGVLLSHLNVIAIIAGYYHVTEETDPNEGPPPHPVSFFTLPMFHVFGFFMLVRAASKGETLV 208 (493)
Q Consensus 129 ~~~~~~~i~~TSGTTG~pK~v~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pl~~~~g~~~~~~~l~~G~~~~ 208 (493)
.++.++.+....+.. ..+...+|...+...+..+...+.. .|+++++++...+|-.... ...++.++..|..+.
T Consensus 38 ~p~~~Al~~~~~~~~-~~~~~~~Ty~eL~~~v~~~A~~L~~----~Gi~~gd~V~i~~~n~~e~-~~~~lA~~~~Gi~~p 111 (632)
T PRK07529 38 HPDAPALSFLLDADP-LDRPETWTYAELLADVTRTANLLHS----LGVGPGDVVAFLLPNLPET-HFALWGGEAAGIANP 111 (632)
T ss_pred CCCCceEEeecccCC-CCCCceeEHHHHHHHHHHHHHHHHH----cCCCCCCEEEEECCCCHHH-HHHHHHHHHhCEEEe
Confidence 456777766533221 1234568888887777776666543 4678999999999965543 356667777774322
Q ss_pred EecCCCHHHHHHHHHhcCeeecccC
Q 011116 209 FMERFDFEKMLKAVENYRVTYMPVS 233 (493)
Q Consensus 209 ~~~~~~~~~~~~~l~~~~~t~l~~~ 233 (493)
+.+..+++++...+++.++.+++..
T Consensus 112 i~~~~~~~~i~~~l~~~~~~~li~~ 136 (632)
T PRK07529 112 INPLLEPEQIAELLRAAGAKVLVTL 136 (632)
T ss_pred CCCcCCHHHHHHHHHhcCCcEEEEe
Confidence 2255788999999999999988875
No 162
>PRK04319 acetyl-CoA synthetase; Provisional
Probab=53.37 E-value=78 Score=32.86 Aligned_cols=87 Identities=17% Similarity=0.199 Sum_probs=65.5
Q ss_pred eecchHHHHHHHHHhhhhcccCCCCCCCCCCcEEEEecChhHHHHHHHHHHHHhcCCeEEEe-cCCCHHHHHHHHHhcCe
Q 011116 149 VLLSHLNVIAIIAGYYHVTEETDPNEGPPPHPVSFFTLPMFHVFGFFMLVRAASKGETLVFM-ERFDFEKMLKAVENYRV 227 (493)
Q Consensus 149 v~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pl~~~~g~~~~~~~l~~G~~~~~~-~~~~~~~~~~~l~~~~~ 227 (493)
..+|...+...+..+...+.. .|+++++++...++-... ....++.++..|+..+.. +....+++...++..++
T Consensus 72 ~~~Ty~el~~~v~~~A~~L~~----~gv~~gd~V~i~~~n~~~-~~~~~la~~~~G~v~vpl~~~~~~~~l~~~l~~~~~ 146 (570)
T PRK04319 72 EKYTYKELKELSNKFANVLKE----LGVEKGDRVFIFMPRIPE-LYFALLGALKNGAIVGPLFEAFMEEAVRDRLEDSEA 146 (570)
T ss_pred eeecHHHHHHHHHHHHHHHHH----hCCCCCCEEEEECCCCHH-HHHHHHHHHHcCcEEcccccccCHHHHHHHHHccCC
Confidence 357888887766665555432 366899999988886553 345677888999988866 56788999999999999
Q ss_pred eecccChHHHHHH
Q 011116 228 TYMPVSPPLIVAF 240 (493)
Q Consensus 228 t~l~~~P~~~~~l 240 (493)
+.++..+..+...
T Consensus 147 ~~ii~~~~~~~~~ 159 (570)
T PRK04319 147 KVLITTPALLERK 159 (570)
T ss_pred cEEEEChhhhhcc
Confidence 9999888765443
No 163
>PRK10717 cysteine synthase A; Provisional
Probab=53.32 E-value=58 Score=31.16 Aligned_cols=58 Identities=12% Similarity=0.068 Sum_probs=44.9
Q ss_pred CCCCCEEEEECCCCCCcHHHHHHHHHHcCCeeccCCCCCCHHHHHHHHhhcCCeEEEEcC
Q 011116 29 LCRKTTSLTSSPLPPSTSPVLYFSLLSLGVVISPANPLSSTSEVSHQIQLSKPSIAFATS 88 (493)
Q Consensus 29 l~~gd~V~l~~~~~~~~~~~~~lA~~~~G~~~v~i~~~~~~~~l~~~l~~~~~~~il~~~ 88 (493)
+++|++|+-.+ .+-.-..+-++|.++|..+..+-|...++.....++..++++++++.
T Consensus 61 ~~~g~~vv~aS--sGN~g~alA~~a~~~G~~~~vv~p~~~~~~k~~~~~~~GA~V~~~~~ 118 (330)
T PRK10717 61 LKPGGTIVEGT--AGNTGIGLALVAAARGYKTVIVMPETQSQEKKDLLRALGAELVLVPA 118 (330)
T ss_pred CCCCCEEEEeC--CcHHHHHHHHHHHHcCCcEEEEeCCCCCHHHHHHHHHcCCEEEEeCC
Confidence 57788876644 47777777788888998777666666667778999999999999875
No 164
>PLN03102 acyl-activating enzyme; Provisional
Probab=53.28 E-value=72 Score=33.26 Aligned_cols=83 Identities=10% Similarity=-0.005 Sum_probs=62.8
Q ss_pred ecchHHHHHHHHHhhhhcccCCCCCCCCCCcEEEEecChhHHHHHHHHHHHHhcCCeEEEe-cCCCHHHHHHHHHhcCee
Q 011116 150 LLSHLNVIAIIAGYYHVTEETDPNEGPPPHPVSFFTLPMFHVFGFFMLVRAASKGETLVFM-ERFDFEKMLKAVENYRVT 228 (493)
Q Consensus 150 ~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pl~~~~g~~~~~~~l~~G~~~~~~-~~~~~~~~~~~l~~~~~t 228 (493)
.+|..++...+..+...+.. .|+.+++++...+|-.-. ....++.++..|+.++.. +..+.+++...++..+++
T Consensus 39 ~~Ty~eL~~~~~~~a~~L~~----~Gl~~gd~Vai~~~n~~e-~~~~~la~~~~G~~~vpl~~~~~~~~l~~~l~~~~~~ 113 (579)
T PLN03102 39 RFTWPQTYDRCCRLAASLIS----LNITKNDVVSVLAPNTPA-MYEMHFAVPMAGAVLNPINTRLDATSIAAILRHAKPK 113 (579)
T ss_pred EEEHHHHHHHHHHHHHHHHH----cCCCCCCEEEEEcCCcHH-HHHHHHHHHhcCcEEeeccccCCHHHHHHHHhccCCe
Confidence 47888887777666665532 367899999999885442 235677888899888877 457899999999999999
Q ss_pred ecccChHHH
Q 011116 229 YMPVSPPLI 237 (493)
Q Consensus 229 ~l~~~P~~~ 237 (493)
.+++.+...
T Consensus 114 ~ii~~~~~~ 122 (579)
T PLN03102 114 ILFVDRSFE 122 (579)
T ss_pred EEEEChhhH
Confidence 998876544
No 165
>PRK03584 acetoacetyl-CoA synthetase; Provisional
Probab=52.85 E-value=1.1e+02 Score=32.39 Aligned_cols=97 Identities=16% Similarity=0.118 Sum_probs=69.3
Q ss_pred CCCCeEEEEccCCCCCCccceecchHHHHHHHHHhhhhcccCCCCCCCCCCcEEEEecChhHHHHHHHHHHHHhcCCeEE
Q 011116 129 YQSDPAAILYSSGTTGKVKGVLLSHLNVIAIIAGYYHVTEETDPNEGPPPHPVSFFTLPMFHVFGFFMLVRAASKGETLV 208 (493)
Q Consensus 129 ~~~~~~~i~~TSGTTG~pK~v~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pl~~~~g~~~~~~~l~~G~~~~ 208 (493)
.++.++.+.... .|. ...+|...+...+..+...+.. .|++++|++...+|... -....++.++..|+..+
T Consensus 97 ~~~~~Al~~~~~--~~~--~~~~Ty~eL~~~v~~lA~~L~~----~Gv~~gd~V~i~~~n~~-e~v~~~lA~~~~Gav~v 167 (655)
T PRK03584 97 RDDRPAIIFRGE--DGP--RRELSWAELRRQVAALAAALRA----LGVGPGDRVAAYLPNIP-ETVVAMLATASLGAIWS 167 (655)
T ss_pred CCCCeEEEEECC--CCc--eEEEeHHHHHHHHHHHHHHHHH----cCCCCCCEEEEEcCCCH-HHHHHHHHHHHcCcEEE
Confidence 356666654322 221 2457888887777766666533 36789999999998654 33466888899999888
Q ss_pred Ee-cCCCHHHHHHHHHhcCeeecccCh
Q 011116 209 FM-ERFDFEKMLKAVENYRVTYMPVSP 234 (493)
Q Consensus 209 ~~-~~~~~~~~~~~l~~~~~t~l~~~P 234 (493)
.. +.+..+.+...++..++.++++..
T Consensus 168 ~l~~~~~~~~l~~~l~~~~~~~li~~~ 194 (655)
T PRK03584 168 SCSPDFGVQGVLDRFGQIEPKVLIAVD 194 (655)
T ss_pred eeCCCCCHHHHHHHHHHcCCcEEEEcc
Confidence 77 557889999999999998887754
No 166
>PRK13295 cyclohexanecarboxylate-CoA ligase; Reviewed
Probab=52.48 E-value=1.1e+02 Score=31.52 Aligned_cols=98 Identities=12% Similarity=0.065 Sum_probs=68.4
Q ss_pred CCCCeEEEEccCCCCCCccceecchHHHHHHHHHhhhhcccCCCCCCCCCCcEEEEecChhHHHHHHHHHHHHhcCCeEE
Q 011116 129 YQSDPAAILYSSGTTGKVKGVLLSHLNVIAIIAGYYHVTEETDPNEGPPPHPVSFFTLPMFHVFGFFMLVRAASKGETLV 208 (493)
Q Consensus 129 ~~~~~~~i~~TSGTTG~pK~v~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pl~~~~g~~~~~~~l~~G~~~~ 208 (493)
.++.++++..-.+ .++...+|...+...+..+...+.. .|+.+++++...++-.... ...+++++..|+..+
T Consensus 37 ~p~~~A~~~~~~~---~~~~~~~Ty~el~~~~~~~a~~L~~----~g~~~g~~Val~~~n~~e~-~~~~la~~~~G~~~v 108 (547)
T PRK13295 37 CPDKTAVTAVRLG---TGAPRRFTYRELAALVDRVAVGLAR----LGVGRGDVVSCQLPNWWEF-TVLYLACSRIGAVLN 108 (547)
T ss_pred CCCceEEEecCCC---ccccceeeHHHHHHHHHHHHHHHHH----hCCCCCCEEEEECCCChHH-HHHHHHHHhcCcEEe
Confidence 3566666553322 2333467888887766666655532 3678999999988865543 456778889999988
Q ss_pred Ee-cCCCHHHHHHHHHhcCeeecccCh
Q 011116 209 FM-ERFDFEKMLKAVENYRVTYMPVSP 234 (493)
Q Consensus 209 ~~-~~~~~~~~~~~l~~~~~t~l~~~P 234 (493)
.. +....+++...++..++..+++..
T Consensus 109 pl~~~~~~~~l~~~l~~~~~~~li~~~ 135 (547)
T PRK13295 109 PLMPIFRERELSFMLKHAESKVLVVPK 135 (547)
T ss_pred ccccccCHHHHHHHHHhcCceEEEEec
Confidence 76 456788899999999988887654
No 167
>TIGR02379 ECA_wecE TDP-4-keto-6-deoxy-D-glucose transaminase. This family consists of TDP-4-keto-6-deoxy-D-glucose transaminases, the WecE (formerly RffA) protein of enterobacterial common antigen (ECA) biosynthesis, from enterobacteria. It also includes closely matching sequence from species not expected to make ECA, but which contain other genes for the biosynthesis of TDP-4-keto-6-deoxy-D-Glc, an intermediate in the biosynthesis of other compounds as well and the substrate of WecA. This family belongs to the DegT/DnrJ/EryC1/StrS aminotransferase family (pfam01041).
Probab=52.27 E-value=54 Score=32.07 Aligned_cols=68 Identities=12% Similarity=-0.027 Sum_probs=43.4
Q ss_pred chhhhHHHHHHhhCCCCCCCEEEEECCCCCCcHHHHHHHHHHcCCeeccCCCC-----CCHHHHHHHHhhcCCeEEEEc
Q 011116 14 SARFTLSHALSKRDSLCRKTTSLTSSPLPPSTSPVLYFSLLSLGVVISPANPL-----SSTSEVSHQIQLSKPSIAFAT 87 (493)
Q Consensus 14 ~~~~~lA~~L~~~~gl~~gd~V~l~~~~~~~~~~~~~lA~~~~G~~~v~i~~~-----~~~~~l~~~l~~~~~~~il~~ 87 (493)
++...|...+ ...++++||.|++-. +.+.....++...|+.++.++.+ ...+.+...+.. ++++|+..
T Consensus 54 sgt~aL~~~l-~al~~~pGd~Viv~~----~t~~~~~~~~~~~G~~~v~vd~d~~~~~~d~~~le~~i~~-~tk~Iip~ 126 (376)
T TIGR02379 54 SCTAALEMAA-LLLDIQPGDEVIMPS----YTFVSTANAFVLRGAKIVFVDIRPDTMNIDETLIESAITH-RTKAIVPV 126 (376)
T ss_pred CHHHHHHHHH-HHcCCCCcCEEEECC----CCcHHHHHHHHHcCCEEEEEecCCCcCCCCHHHHHHhcCc-CceEEEEe
Confidence 4444344445 556899999987633 45566666777889887776532 356677776653 66776643
No 168
>PRK08316 acyl-CoA synthetase; Validated
Probab=52.25 E-value=1.3e+02 Score=30.57 Aligned_cols=88 Identities=10% Similarity=-0.055 Sum_probs=65.5
Q ss_pred eecchHHHHHHHHHhhhhcccCCCCCCCCCCcEEEEecChhHHHHHHHHHHHHhcCCeEEEec-CCCHHHHHHHHHhcCe
Q 011116 149 VLLSHLNVIAIIAGYYHVTEETDPNEGPPPHPVSFFTLPMFHVFGFFMLVRAASKGETLVFME-RFDFEKMLKAVENYRV 227 (493)
Q Consensus 149 v~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pl~~~~g~~~~~~~l~~G~~~~~~~-~~~~~~~~~~l~~~~~ 227 (493)
..+|...+...+..+...+.. .++.+++++....+-... ....++.++..|+..+..+ ..+.+++...+++.++
T Consensus 35 ~~~Ty~~l~~~~~~~a~~L~~----~gi~~~~~V~l~~~~~~~-~~~~~~a~~~~G~~~v~l~~~~~~~~i~~~l~~~~~ 109 (523)
T PRK08316 35 RSWTYAELDAAVNRVAAALLD----LGLKKGDRVAALGHNSDA-YALLWLACARAGAVHVPVNFMLTGEELAYILDHSGA 109 (523)
T ss_pred ceeeHHHHHHHHHHHHHHHHH----cCCCCCCEEEEECCCCHH-HHHHHHHHHhcCcEEEecccccCHHHHHHHHHhCCC
Confidence 457888887776666665532 356889999888876653 3466888899998888774 5678899999999999
Q ss_pred eecccChHHHHHHH
Q 011116 228 TYMPVSPPLIVAFI 241 (493)
Q Consensus 228 t~l~~~P~~~~~l~ 241 (493)
..++........+.
T Consensus 110 ~~ii~~~~~~~~~~ 123 (523)
T PRK08316 110 RAFLVDPALAPTAE 123 (523)
T ss_pred CEEEEccchHHHHH
Confidence 99888776655443
No 169
>TIGR02188 Ac_CoA_lig_AcsA acetate--CoA ligase. This model describes acetate-CoA ligase (EC 6.2.1.1), also called acetyl-CoA synthetase and acetyl-activating enzyme. It catalyzes the reaction ATP + acetate + CoA = AMP + diphosphate + acetyl-CoA and belongs to the family of AMP-binding enzymes described by Pfam model pfam00501.
Probab=51.99 E-value=1.2e+02 Score=32.02 Aligned_cols=99 Identities=11% Similarity=0.108 Sum_probs=71.4
Q ss_pred CCCCeEEEEccCCCCCCccceecchHHHHHHHHHhhhhcccCCCCCCCCCCcEEEEecChhHHHHHHHHHHHHhcCCeEE
Q 011116 129 YQSDPAAILYSSGTTGKVKGVLLSHLNVIAIIAGYYHVTEETDPNEGPPPHPVSFFTLPMFHVFGFFMLVRAASKGETLV 208 (493)
Q Consensus 129 ~~~~~~~i~~TSGTTG~pK~v~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pl~~~~g~~~~~~~l~~G~~~~ 208 (493)
.++.++.+.... .+|. ...+|...+...+..+...+.. .|.+++|++...+|.... ....++.++..|+..+
T Consensus 70 ~p~~~Al~~~~~-~~~~--~~~~Ty~eL~~~v~~lA~~L~~----~Gv~~gd~V~i~~~n~~e-~~~~~lA~~~~Gav~v 141 (625)
T TIGR02188 70 RPDKVAIIWEGD-EPGE--VRKITYRELHREVCRFANVLKS----LGVKKGDRVAIYMPMIPE-AAIAMLACARIGAIHS 141 (625)
T ss_pred CCCCeEEEEEcC-CCCc--eEEEEHHHHHHHHHHHHHHHHH----cCCCCCCEEEEECCCCHH-HHHHHHHHHHhCCEEe
Confidence 466777664322 1222 3458888887777776666543 467899999999886543 3456778889999888
Q ss_pred Ee-cCCCHHHHHHHHHhcCeeecccChH
Q 011116 209 FM-ERFDFEKMLKAVENYRVTYMPVSPP 235 (493)
Q Consensus 209 ~~-~~~~~~~~~~~l~~~~~t~l~~~P~ 235 (493)
.. +.+..+.+...++..+++++++...
T Consensus 142 ~i~~~~~~~~l~~~l~~~~~~~li~~~~ 169 (625)
T TIGR02188 142 VVFGGFSAEALADRINDAGAKLVITADE 169 (625)
T ss_pred ccCCCCCHHHHHHHHHhcCCCEEEEcCc
Confidence 76 5678899999999999999887653
No 170
>PLN00011 cysteine synthase
Probab=51.39 E-value=68 Score=30.59 Aligned_cols=67 Identities=10% Similarity=0.041 Sum_probs=48.9
Q ss_pred HHHHHHhhCCCCCC-CEEEEECCCCCCcHHHHHHHHHHcCCeeccCCCCCCHHHHHHHHhhcCCeEEEEcC
Q 011116 19 LSHALSKRDSLCRK-TTSLTSSPLPPSTSPVLYFSLLSLGVVISPANPLSSTSEVSHQIQLSKPSIAFATS 88 (493)
Q Consensus 19 lA~~L~~~~gl~~g-d~V~l~~~~~~~~~~~~~lA~~~~G~~~v~i~~~~~~~~l~~~l~~~~~~~il~~~ 88 (493)
|+..+ .+.-+.+| ++|+- .. .+-.-..+-++|..+|..+..+-|...++....+++..+++++++++
T Consensus 56 l~~a~-~~g~~~~g~~~vv~-aS-sGN~g~alA~~a~~~G~~~~ivvp~~~~~~k~~~i~~~GA~V~~~~~ 123 (323)
T PLN00011 56 IKDAE-DKGLITPGKSTLIE-AT-AGNTGIGLACIGAARGYKVILVMPSTMSLERRIILRALGAEVHLTDQ 123 (323)
T ss_pred HHHHH-HcCCCCCCCcEEEE-eC-CChHHHHHHHHHHHcCCeEEEEeCCCCCHHHHHHHHHcCCEEEEECC
Confidence 33333 33336787 66655 44 57777778888888998877776666667778899999999999885
No 171
>cd01445 TST_Repeats Thiosulfate sulfurtransferases (TST) contain 2 copies of the Rhodanese Homology Domain. Only the second repeat contains the catalytically active Cys residue. The role of the 1st repeat is uncertain, but believed to be involved in protein interaction. This CD aligns the 1st and 2nd repeats.
Probab=51.21 E-value=34 Score=27.88 Aligned_cols=41 Identities=5% Similarity=-0.050 Sum_probs=33.7
Q ss_pred hHHHHHHhhCCCCCCCEEEEECCCC---CCcHHHHHHHHHHcCCee
Q 011116 18 TLSHALSKRDSLCRKTTSLTSSPLP---PSTSPVLYFSLLSLGVVI 60 (493)
Q Consensus 18 ~lA~~L~~~~gl~~gd~V~l~~~~~---~~~~~~~~lA~~~~G~~~ 60 (493)
+++..| .+.|+.+++.|.+++. . +.....+++++-.+|..-
T Consensus 82 ~~~~~~-~~~GI~~~~~vVvY~~-~~~~g~~A~r~~~~l~~~G~~~ 125 (138)
T cd01445 82 EFAAMF-EAKGIDLDKHLIATDG-DDLGGFTACHIALAARLCGHPD 125 (138)
T ss_pred HHHHHH-HHcCCCCCCeEEEECC-CCCcchHHHHHHHHHHHcCCCC
Confidence 568888 8899999999999997 5 667778888888888653
No 172
>COG4821 Uncharacterized protein containing SIS (Sugar ISomerase) phosphosugar binding domain [General function prediction only]
Probab=51.11 E-value=39 Score=29.21 Aligned_cols=58 Identities=17% Similarity=0.121 Sum_probs=43.1
Q ss_pred cccccccchhhhHHHHHHhhCCCCCCCEEEEECCCCCCcHHHHHHHHHHcCCeeccCCCCCCHHHHHHHHhhcCCeEEEE
Q 011116 7 ASATANSSARFTLSHALSKRDSLCRKTTSLTSSPLPPSTSPVLYFSLLSLGVVISPANPLSSTSEVSHQIQLSKPSIAFA 86 (493)
Q Consensus 7 ~~~~~~~~~~~~lA~~L~~~~gl~~gd~V~l~~~~~~~~~~~~~lA~~~~G~~~v~i~~~~~~~~l~~~l~~~~~~~il~ 86 (493)
+++..+|-+-+ +.++.++.++++||...+++. .|..++|+ ++....+.-++++|..
T Consensus 82 ass~lErieg~--~~~~l~~~~i~~~DVliviSn---------------SGrNpvpi-------e~A~~~rekGa~vI~v 137 (243)
T COG4821 82 ASSYLERIEGY--AKLFLHRLQIRPNDVLIVISN---------------SGRNPVPI-------EVAEYAREKGAKVIAV 137 (243)
T ss_pred ccchhHhhhhH--HHHHHHHhcCCCCCEEEEEeC---------------CCCCCcch-------HHHHHHHhcCCeEEEE
Confidence 44445555555 777779999999999999988 36666776 4677778888888877
Q ss_pred cC
Q 011116 87 TS 88 (493)
Q Consensus 87 ~~ 88 (493)
+.
T Consensus 138 TS 139 (243)
T COG4821 138 TS 139 (243)
T ss_pred eh
Confidence 64
No 173
>PRK11706 TDP-4-oxo-6-deoxy-D-glucose transaminase; Provisional
Probab=51.05 E-value=56 Score=31.90 Aligned_cols=68 Identities=13% Similarity=-0.046 Sum_probs=42.8
Q ss_pred chhhhHHHHHHhhCCCCCCCEEEEECCCCCCcHHHHHHHHHHcCCeeccCCC--C---CCHHHHHHHHhhcCCeEEEEc
Q 011116 14 SARFTLSHALSKRDSLCRKTTSLTSSPLPPSTSPVLYFSLLSLGVVISPANP--L---SSTSEVSHQIQLSKPSIAFAT 87 (493)
Q Consensus 14 ~~~~~lA~~L~~~~gl~~gd~V~l~~~~~~~~~~~~~lA~~~~G~~~v~i~~--~---~~~~~l~~~l~~~~~~~il~~ 87 (493)
++...|...+ ...++++||.|++-.+ .+.....++...|+.++.++. . ...+++...+.. ++++|+..
T Consensus 54 sgt~al~~~l-~~~~~~~Gd~Viv~~~----t~~~~~~~~~~~G~~~v~~d~d~~~~~~d~~~le~~i~~-~tk~i~~~ 126 (375)
T PRK11706 54 SCTAALEMAA-LLLDIQPGDEVIMPSY----TFVSTANAFVLRGAKIVFVDIRPDTMNIDETLIEAAITP-KTRAIVPV 126 (375)
T ss_pred CHHHHHHHHH-HHhCCCCCCEEEECCC----CcHHHHHHHHHcCCEEEEEecCCCcCCcCHHHHHHhcCC-CCeEEEEe
Confidence 4444333444 4467899999876444 455556677788888776653 2 457778777654 56766644
No 174
>PRK07788 acyl-CoA synthetase; Validated
Probab=50.87 E-value=91 Score=32.16 Aligned_cols=86 Identities=8% Similarity=-0.039 Sum_probs=65.0
Q ss_pred ecchHHHHHHHHHhhhhcccCCCCCCCCCCcEEEEecChhHHHHHHHHHHHHhcCCeEEEec-CCCHHHHHHHHHhcCee
Q 011116 150 LLSHLNVIAIIAGYYHVTEETDPNEGPPPHPVSFFTLPMFHVFGFFMLVRAASKGETLVFME-RFDFEKMLKAVENYRVT 228 (493)
Q Consensus 150 ~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pl~~~~g~~~~~~~l~~G~~~~~~~-~~~~~~~~~~l~~~~~t 228 (493)
.+|...+...+..+...+.. .|+.+++++...++-.- .....++.++..|+..+..+ ....+++...+++.+++
T Consensus 74 ~~Ty~el~~~~~~la~~L~~----~gi~~gd~V~i~~~n~~-~~~~~~la~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~ 148 (549)
T PRK07788 74 TLTYAELDEQSNALARGLLA----LGVRAGDGVAVLARNHR-GFVLALYAAGKVGARIILLNTGFSGPQLAEVAAREGVK 148 (549)
T ss_pred ceeHHHHHHHHHHHHHHHHH----cCCCCCCEEEEEcCCCH-HHHHHHHHHHhcCCEEEEeCCCCCHHHHHHHHHhcCCc
Confidence 57888887776666665543 35688999988876543 23356888899999998874 56789999999999999
Q ss_pred ecccChHHHHHH
Q 011116 229 YMPVSPPLIVAF 240 (493)
Q Consensus 229 ~l~~~P~~~~~l 240 (493)
.++..+.....+
T Consensus 149 ~ii~~~~~~~~~ 160 (549)
T PRK07788 149 ALVYDDEFTDLL 160 (549)
T ss_pred EEEECchhHHHH
Confidence 998887665544
No 175
>PRK00174 acetyl-CoA synthetase; Provisional
Probab=50.49 E-value=1.3e+02 Score=31.75 Aligned_cols=98 Identities=9% Similarity=0.045 Sum_probs=70.6
Q ss_pred CCCCeEEEEccCCCCCCccceecchHHHHHHHHHhhhhcccCCCCCCCCCCcEEEEecChhHHHHHHHHHHHHhcCCeEE
Q 011116 129 YQSDPAAILYSSGTTGKVKGVLLSHLNVIAIIAGYYHVTEETDPNEGPPPHPVSFFTLPMFHVFGFFMLVRAASKGETLV 208 (493)
Q Consensus 129 ~~~~~~~i~~TSGTTG~pK~v~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pl~~~~g~~~~~~~l~~G~~~~ 208 (493)
.++.++++..... + .....+|...+...+..+...+.. .|..++|++...+|..... ...++.++..|+..+
T Consensus 80 ~p~~~Al~~~~~~--~-~~~~~lTy~eL~~~v~~lA~~L~~----~Gv~~gd~V~i~~~n~~e~-~~~~lA~~~~Gav~v 151 (637)
T PRK00174 80 RGDKVAIIWEGDD--P-GDSRKITYRELHREVCRFANALKS----LGVKKGDRVAIYMPMIPEA-AVAMLACARIGAVHS 151 (637)
T ss_pred CCCCeEEEEECCC--C-CceEEEEHHHHHHHHHHHHHHHHH----cCCCCCCEEEEEcCCCHHH-HHHHHHHHHcCCEEE
Confidence 4677776643211 0 124568999988877776666543 4678999999988865533 356778889999888
Q ss_pred Ee-cCCCHHHHHHHHHhcCeeecccCh
Q 011116 209 FM-ERFDFEKMLKAVENYRVTYMPVSP 234 (493)
Q Consensus 209 ~~-~~~~~~~~~~~l~~~~~t~l~~~P 234 (493)
.. +....+++...++..++.+++...
T Consensus 152 ~l~~~~~~~~l~~~l~~~~~~~li~~~ 178 (637)
T PRK00174 152 VVFGGFSAEALADRIIDAGAKLVITAD 178 (637)
T ss_pred ecCCCCCHHHHHHHHHhcCCcEEEEcC
Confidence 77 557889999999999999988654
No 176
>PRK06155 crotonobetaine/carnitine-CoA ligase; Provisional
Probab=50.29 E-value=1.1e+02 Score=31.60 Aligned_cols=87 Identities=13% Similarity=0.033 Sum_probs=66.5
Q ss_pred ecchHHHHHHHHHhhhhcccCCCCCCCCCCcEEEEecChhHHHHHHHHHHHHhcCCeEEEe-cCCCHHHHHHHHHhcCee
Q 011116 150 LLSHLNVIAIIAGYYHVTEETDPNEGPPPHPVSFFTLPMFHVFGFFMLVRAASKGETLVFM-ERFDFEKMLKAVENYRVT 228 (493)
Q Consensus 150 ~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pl~~~~g~~~~~~~l~~G~~~~~~-~~~~~~~~~~~l~~~~~t 228 (493)
.+|...+...+..+...+.. .|+++++++....|-.... ...++.++..|+..+.. +..+.+++...+++.+++
T Consensus 46 ~~Ty~el~~~v~~la~~L~~----~gi~~g~~V~v~~~n~~~~-~~~~lA~~~~G~~~vpl~~~~~~~~l~~~l~~~~~~ 120 (542)
T PRK06155 46 RWTYAEAARAAAAAAHALAA----AGVKRGDRVALMCGNRIEF-LDVFLGCAWLGAIAVPINTALRGPQLEHILRNSGAR 120 (542)
T ss_pred cccHHHHHHHHHHHHHHHHH----cCCCCCCEEEEECCCChHH-HHHHHHHHHhCCEEEEeccccCHHHHHHHHHhcCce
Confidence 47888887776666665532 3568899998887766544 46788889999998877 456889999999999999
Q ss_pred ecccChHHHHHHH
Q 011116 229 YMPVSPPLIVAFI 241 (493)
Q Consensus 229 ~l~~~P~~~~~l~ 241 (493)
.++........+.
T Consensus 121 ~l~~~~~~~~~~~ 133 (542)
T PRK06155 121 LLVVEAALLAALE 133 (542)
T ss_pred EEEEChhhHHHHH
Confidence 9988877665543
No 177
>PTZ00342 acyl-CoA synthetase; Provisional
Probab=50.16 E-value=1.8e+02 Score=31.54 Aligned_cols=123 Identities=13% Similarity=0.156 Sum_probs=81.0
Q ss_pred CCCCeEEEEccCCCCCCccceecchHHHHHHHHHhhhhcccCCCCCCCCCC-----------cEEEEecChhHHHHHHHH
Q 011116 129 YQSDPAAILYSSGTTGKVKGVLLSHLNVIAIIAGYYHVTEETDPNEGPPPH-----------PVSFFTLPMFHVFGFFML 197 (493)
Q Consensus 129 ~~~~~~~i~~TSGTTG~pK~v~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~-----------~~~~~~~pl~~~~g~~~~ 197 (493)
.++.++++....|. + -..+|...+...+..+...+... ...|+.++ +++...++-..-. ....
T Consensus 74 ~p~~~Al~~~~~g~---~-~~~~Ty~el~~~v~~~A~~L~~~-~~~Gv~~g~~~~~~~~g~~d~V~i~~~N~~ew-~~~~ 147 (746)
T PTZ00342 74 NNNKIAIVEHSCGE---P-QNYITYGNFFKKVLSFSHSLNTY-EGKGIPEKKYNEEQNNGKFKLLGLYGSNSINW-LVAD 147 (746)
T ss_pred cCCceeEeccCCCC---C-ceeeeHHHHHHHHHHHHHHHHHH-hhcCCCcCccccccccccccEEEEEcCCCHHH-HHHH
Confidence 45667765432221 1 13578888877777766665320 00256666 7888887754322 3567
Q ss_pred HHHHhcCCeEEEe-cCCCHHHHHHHHHhcCeeecccChHHHHHHHhcccCCCCCCCCeeEEEecC
Q 011116 198 VRAASKGETLVFM-ERFDFEKMLKAVENYRVTYMPVSPPLIVAFINSKLTDKYDLSSLQLLGCGG 261 (493)
Q Consensus 198 ~~~l~~G~~~~~~-~~~~~~~~~~~l~~~~~t~l~~~P~~~~~l~~~~~~~~~~l~~lr~v~~~G 261 (493)
++++..|+..+.. +.+..+++...+++-++.++++.+..+..+..... .++.++.+++-+
T Consensus 148 lA~~~~Gav~Vpl~~~~~~~el~~il~~s~~~~lv~~~~~~~~l~~~~~----~~~~l~~ii~~~ 208 (746)
T PTZ00342 148 LACMLSGVTTLVMHSKFSIDVIVDILNETKLEWLCLDLDLVEGLLERKN----ELPHLKKLIILD 208 (746)
T ss_pred HHHHHcCCeEEEecCCCCHHHHHHHHhcCCCCEEEEcHHHHHHHHHhhc----cCCCceEEEEEC
Confidence 7888899988877 56789999999999999999988777776655321 245566665543
No 178
>PRK06187 long-chain-fatty-acid--CoA ligase; Validated
Probab=50.12 E-value=1.5e+02 Score=29.98 Aligned_cols=85 Identities=8% Similarity=-0.057 Sum_probs=63.0
Q ss_pred cchHHHHHHHHHhhhhcccCCCCCCCCCCcEEEEecChhHHHHHHHHHHHHhcCCeEEEec-CCCHHHHHHHHHhcCeee
Q 011116 151 LSHLNVIAIIAGYYHVTEETDPNEGPPPHPVSFFTLPMFHVFGFFMLVRAASKGETLVFME-RFDFEKMLKAVENYRVTY 229 (493)
Q Consensus 151 ~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pl~~~~g~~~~~~~l~~G~~~~~~~-~~~~~~~~~~l~~~~~t~ 229 (493)
+|...+...+......+.. .++++++++....|-.. .....+++++..|+..+..+ ....+.+...++..++..
T Consensus 32 ~Ty~~l~~~~~~~a~~L~~----~g~~~~~~V~l~~~~~~-~~~~~~la~~~~G~~~v~~~~~~~~~~~~~~i~~~~~~~ 106 (521)
T PRK06187 32 TTYAELDERVNRLANALRA----LGVKKGDRVAVFDWNSH-EYLEAYFAVPKIGAVLHPINIRLKPEEIAYILNDAEDRV 106 (521)
T ss_pred EcHHHHHHHHHHHHHHHHH----cCCCCCCEEEEECCCCH-HHHHHHHHHHHcCeEEEecccCCCHHHHHHHHHhcCCeE
Confidence 7788887666655554432 35688999998888765 33467888999999888774 467889999999999998
Q ss_pred cccChHHHHHH
Q 011116 230 MPVSPPLIVAF 240 (493)
Q Consensus 230 l~~~P~~~~~l 240 (493)
++........+
T Consensus 107 i~~~~~~~~~~ 117 (521)
T PRK06187 107 VLVDSEFVPLL 117 (521)
T ss_pred EEEcchHHHHH
Confidence 88877655443
No 179
>TIGR01139 cysK cysteine synthase A. This model distinguishes cysteine synthase A (CysK) from cysteine synthase B (CysM). CysM differs in having a broader specificity that also allows the use of thiosulfate to produce cysteine thiosulfonate.
Probab=49.87 E-value=83 Score=29.54 Aligned_cols=61 Identities=11% Similarity=0.081 Sum_probs=44.7
Q ss_pred CC-CCCCCEEEEECCCCCCcHHHHHHHHHHcCCeeccCCCCCCHHHHHHHHhhcCCeEEEEcCC
Q 011116 27 DS-LCRKTTSLTSSPLPPSTSPVLYFSLLSLGVVISPANPLSSTSEVSHQIQLSKPSIAFATSH 89 (493)
Q Consensus 27 ~g-l~~gd~V~l~~~~~~~~~~~~~lA~~~~G~~~v~i~~~~~~~~l~~~l~~~~~~~il~~~~ 89 (493)
.| +.+|++|+--+. +-.-..+-++|.+.|..+..+-|...++.....++..+++++++...
T Consensus 51 ~g~~~~g~~vv~aSs--GN~g~alA~~a~~~Gl~~~i~vp~~~~~~k~~~~~~~GA~v~~~~~~ 112 (298)
T TIGR01139 51 RGLLKPGKTIVEPTS--GNTGIALAMVAAARGYKLILTMPETMSIERRKLLKAYGAELVLTPGA 112 (298)
T ss_pred cCCCCCCCEEEEeCC--ChhHHHHHHHHHHcCCeEEEEeCCccCHHHHHHHHHcCCEEEEECCC
Confidence 45 478888754444 66666677788889988777766655555688899999999998753
No 180
>PLN02246 4-coumarate--CoA ligase
Probab=49.50 E-value=1.4e+02 Score=30.66 Aligned_cols=99 Identities=11% Similarity=0.076 Sum_probs=68.3
Q ss_pred CCCCeEEEEccCCCCCCccceecchHHHHHHHHHhhhhcccCCCCCCCCCCcEEEEecChhHHHHHHHHHHHHhcCCeEE
Q 011116 129 YQSDPAAILYSSGTTGKVKGVLLSHLNVIAIIAGYYHVTEETDPNEGPPPHPVSFFTLPMFHVFGFFMLVRAASKGETLV 208 (493)
Q Consensus 129 ~~~~~~~i~~TSGTTG~pK~v~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pl~~~~g~~~~~~~l~~G~~~~ 208 (493)
.++.++.+...+ +-.+|+..+......+...+.. .|+.+++++....+-.. .....++.++..|+..+
T Consensus 36 ~~~~~a~~~~~~-------~~~~ty~el~~~~~~la~~L~~----~g~~~gd~V~i~~~~~~-~~~~~~la~~~~G~~~v 103 (537)
T PLN02246 36 FSDRPCLIDGAT-------GRVYTYADVELLSRRVAAGLHK----LGIRQGDVVMLLLPNCP-EFVLAFLGASRRGAVTT 103 (537)
T ss_pred CCCCeEEEecCC-------CceeeHHHHHHHHHHHHHHHHH----hCCCCCCEEEEECCCCh-HHHHHHHHHHHcCEEEe
Confidence 456666553211 2357888887776666655432 36689999998887663 23356778888888888
Q ss_pred Ee-cCCCHHHHHHHHHhcCeeecccChHHHHH
Q 011116 209 FM-ERFDFEKMLKAVENYRVTYMPVSPPLIVA 239 (493)
Q Consensus 209 ~~-~~~~~~~~~~~l~~~~~t~l~~~P~~~~~ 239 (493)
.. +..+.+++...++..++..++........
T Consensus 104 ~l~~~~~~~~l~~~l~~~~~~~li~~~~~~~~ 135 (537)
T PLN02246 104 TANPFYTPAEIAKQAKASGAKLIITQSCYVDK 135 (537)
T ss_pred cCCCCCCHHHHHHHHHhcCCcEEEEccchHHH
Confidence 77 45678999999999999988776654443
No 181
>PLN02614 long-chain acyl-CoA synthetase
Probab=48.90 E-value=2.4e+02 Score=30.15 Aligned_cols=87 Identities=9% Similarity=-0.004 Sum_probs=65.8
Q ss_pred ecchHHHHHHHHHhhhhcccCCCCCCCCCCcEEEEecChhHHHHHHHHHHHHhcCCeEEEe-cCCCHHHHHHHHHhcCee
Q 011116 150 LLSHLNVIAIIAGYYHVTEETDPNEGPPPHPVSFFTLPMFHVFGFFMLVRAASKGETLVFM-ERFDFEKMLKAVENYRVT 228 (493)
Q Consensus 150 ~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pl~~~~g~~~~~~~l~~G~~~~~~-~~~~~~~~~~~l~~~~~t 228 (493)
.+|...+...+..+...+.. .|+.++|++...++-..-+ ....+.++..|+..+-. +....+++...+++.++.
T Consensus 79 ~~Ty~el~~~v~~lA~~L~~----~Gv~~Gd~Vai~~~n~~e~-~~~~lA~~~~Gav~vpl~~~~~~~~l~~il~~~~~~ 153 (666)
T PLN02614 79 WQTYQEVYDIVIKLGNSLRS----VGVKDEAKCGIYGANSPEW-IISMEACNAHGLYCVPLYDTLGAGAVEFIISHSEVS 153 (666)
T ss_pred EeEHHHHHHHHHHHHHHHHH----cCCCCCCEEEEEcCCCHHH-HHHHHHHHHcCCEEEEecCCCCHHHHHHHHhccCCC
Confidence 46888887777666665532 3678999999988866532 35677888899988876 557889999999999999
Q ss_pred ecccChHHHHHHH
Q 011116 229 YMPVSPPLIVAFI 241 (493)
Q Consensus 229 ~l~~~P~~~~~l~ 241 (493)
++++....+..+.
T Consensus 154 ~vi~~~~~~~~~~ 166 (666)
T PLN02614 154 IVFVEEKKISELF 166 (666)
T ss_pred EEEECHHHHHHHH
Confidence 9998776555443
No 182
>PRK05857 acyl-CoA synthetase; Validated
Probab=48.64 E-value=78 Score=32.63 Aligned_cols=97 Identities=11% Similarity=0.037 Sum_probs=68.1
Q ss_pred CCCCCeEEEEccCCCCCCccceecchHHHHHHHHHhhhhcccCCCCCCCCCCcEEEEecChhHHHHHHHHHHHHhcCCeE
Q 011116 128 VYQSDPAAILYSSGTTGKVKGVLLSHLNVIAIIAGYYHVTEETDPNEGPPPHPVSFFTLPMFHVFGFFMLVRAASKGETL 207 (493)
Q Consensus 128 ~~~~~~~~i~~TSGTTG~pK~v~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pl~~~~g~~~~~~~l~~G~~~ 207 (493)
..++.++.+.. .|. ..+|...+...+..+...+.. .|+.+++++...++....+ ...++.++..|+..
T Consensus 26 ~~p~~~a~~~~-~~~------~~~Ty~el~~~~~~~a~~L~~----~g~~~g~~V~i~~~~~~e~-~~~~lA~~~~G~v~ 93 (540)
T PRK05857 26 QQPEAIALRRC-DGT------SALRYRELVAEVGGLAADLRA----QSVSRGSRVLVISDNGPET-YLSVLACAKLGAIA 93 (540)
T ss_pred hCCCcEEEeec-CCC------ceeeHHHHHHHHHHHHHHHHH----hCcCCCCEEEEEcCCCHHH-HHHHHHHHHcCeEE
Confidence 34666655432 221 347888887777766665532 3668899998888765533 45688888999998
Q ss_pred EEec-CCCHHHHHHHHHhcCeeecccChHH
Q 011116 208 VFME-RFDFEKMLKAVENYRVTYMPVSPPL 236 (493)
Q Consensus 208 ~~~~-~~~~~~~~~~l~~~~~t~l~~~P~~ 236 (493)
+..+ ..+.+++...++..++..++..+..
T Consensus 94 v~l~~~~~~~~l~~~~~~~~~~~ii~~~~~ 123 (540)
T PRK05857 94 VMADGNLPIAAIERFCQITDPAAALVAPGS 123 (540)
T ss_pred EecCccCCHHHHHHHHHhcCCceEEEeccc
Confidence 8774 4678899999998888887776643
No 183
>KOG1177 consensus Long chain fatty acid acyl-CoA ligase [Lipid transport and metabolism]
Probab=48.60 E-value=1.5e+02 Score=29.75 Aligned_cols=109 Identities=11% Similarity=0.025 Sum_probs=74.6
Q ss_pred ceecchHHHHHHHHHhhhhcccCCCCCCCCCCcEEEEecChhHHHHHHHHHHHHhcCCeEEEe-cCCCHHHHHHHHHhcC
Q 011116 148 GVLLSHLNVIAIIAGYYHVTEETDPNEGPPPHPVSFFTLPMFHVFGFFMLVRAASKGETLVFM-ERFDFEKMLKAVENYR 226 (493)
Q Consensus 148 ~v~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pl~~~~g~~~~~~~l~~G~~~~~~-~~~~~~~~~~~l~~~~ 226 (493)
++..|.+.+...+.+++..+- ..|++++|++..+.|-+.-.- .+.+.+..+|..++.. +....+++.=.+++.+
T Consensus 75 g~R~Tf~~~~~ev~slAaGll----~lGL~kGDrVgvwgpN~~~w~-l~~lA~A~AG~v~v~~NP~Yq~~elr~~L~k~~ 149 (596)
T KOG1177|consen 75 GIRLTFSEFVSEVESLAAGLL----SLGLKKGDRVGVWGPNSYEWV-LCQLACARAGLVLVNLNPAYQSEELRYVLKKVG 149 (596)
T ss_pred cchhhHHHHHHHHHHHHhhHH----hhcCCCCCEEEEecCChHHHH-HHHHHHHHhceEEeccCcccccHHHHHHHhhcC
Confidence 344677777666655444431 248899999999998765432 4566777888888877 4466788888999999
Q ss_pred eeecccChHHH-----HHHHhccc---------CCCCCCCCeeEEEecC
Q 011116 227 VTYMPVSPPLI-----VAFINSKL---------TDKYDLSSLQLLGCGG 261 (493)
Q Consensus 227 ~t~l~~~P~~~-----~~l~~~~~---------~~~~~l~~lr~v~~~G 261 (493)
+..++..|.+. ..+.+.++ .+...++.++.++..+
T Consensus 150 ~k~l~~p~~~k~~ny~~~l~~icPEv~~~~~G~lkS~~lp~lthvi~~~ 198 (596)
T KOG1177|consen 150 CKALFAPPQFKTQNYYETLLEICPEVMRGDPGQLKSELLPELTHVILAD 198 (596)
T ss_pred eEEEEccchhhhchHHHHHHHhhHHhhcCCCccccccccccceEEEecC
Confidence 99998888653 33333322 1234467888888877
No 184
>TIGR01217 ac_ac_CoA_syn acetoacetyl-CoA synthase. This enzyme catalyzes the first step of the mevalonate pathway of IPP biosynthesis. Most bacteria do not use this pathway, but rather the deoxyxylulose pathway.
Probab=48.58 E-value=1.4e+02 Score=31.68 Aligned_cols=96 Identities=14% Similarity=0.098 Sum_probs=69.3
Q ss_pred CCCeEEEEccCCCCCCccceecchHHHHHHHHHhhhhcccCCCCCCCCCCcEEEEecChhHHHHHHHHHHHHhcCCeEEE
Q 011116 130 QSDPAAILYSSGTTGKVKGVLLSHLNVIAIIAGYYHVTEETDPNEGPPPHPVSFFTLPMFHVFGFFMLVRAASKGETLVF 209 (493)
Q Consensus 130 ~~~~~~i~~TSGTTG~pK~v~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pl~~~~g~~~~~~~l~~G~~~~~ 209 (493)
.++++.+.... +|. ...+|...+...+..+...+.. .|++++|++...+|..-.. ...++.++..|+..+.
T Consensus 98 ~~~~a~~~~~~--~~~--~~~~Ty~eL~~~v~~lA~~L~~----~Gv~~GdrV~i~~~n~~e~-~~~~lA~~~~Gav~vp 168 (652)
T TIGR01217 98 GTEPALLYVDE--THE--PAPVTWAELRRQVASLAAALRA----LGVRPGDRVSGYLPNIPQA-VVAMLATASVGAIWSS 168 (652)
T ss_pred CCCeEEEEECC--CCC--eeEEeHHHHHHHHHHHHHHHHH----cCCCCCCEEEEEcCCCHHH-HHHHHHHHHhCeEEEe
Confidence 35556555422 222 2457888888777777666643 4779999999999876533 3567788889988877
Q ss_pred e-cCCCHHHHHHHHHhcCeeecccCh
Q 011116 210 M-ERFDFEKMLKAVENYRVTYMPVSP 234 (493)
Q Consensus 210 ~-~~~~~~~~~~~l~~~~~t~l~~~P 234 (493)
. +.+..+.+...+++.++.++++..
T Consensus 169 ~~~~~~~~~l~~~l~~~~~k~li~~~ 194 (652)
T TIGR01217 169 CSPDFGARGVLDRFQQIEPKLLFTVD 194 (652)
T ss_pred cCCCCCHHHHHHHHHhcCCcEEEEcc
Confidence 6 557889999999999998887654
No 185
>TIGR01137 cysta_beta cystathionine beta-synthase. Members of this family closely resemble cysteine synthase but contain an additional C-terminal CBS domain. The function of any bacterial member included in this family is proposed but not proven.
Probab=47.85 E-value=66 Score=32.36 Aligned_cols=58 Identities=14% Similarity=0.016 Sum_probs=45.1
Q ss_pred CCCCCEEEEECCCCCCcHHHHHHHHHHcCCeeccCCCCCCHHHHHHHHhhcCCeEEEEcC
Q 011116 29 LCRKTTSLTSSPLPPSTSPVLYFSLLSLGVVISPANPLSSTSEVSHQIQLSKPSIAFATS 88 (493)
Q Consensus 29 l~~gd~V~l~~~~~~~~~~~~~lA~~~~G~~~v~i~~~~~~~~l~~~l~~~~~~~il~~~ 88 (493)
+++|++|.-.+ .+-.-..+-++|.+.|..+..+-|...++.-...++..+++++++..
T Consensus 59 ~~~g~~vv~~s--sGN~g~alA~~a~~~G~~~~iv~p~~~~~~k~~~~~~~GA~v~~~~~ 116 (454)
T TIGR01137 59 LKPGDTIIEPT--SGNTGIGLALVAAIKGYKCIIVLPEKMSNEKVDVLKALGAEIVRTPT 116 (454)
T ss_pred CCCCCEEEEeC--CcHHHHHHHHHHHHcCCeEEEEeCCCcCHHHHHHHHHCCCEEEEcCC
Confidence 47888876664 47777777888899998877776655556677889999999999874
No 186
>KOG1176 consensus Acyl-CoA synthetase [Lipid transport and metabolism]
Probab=47.74 E-value=2.2e+02 Score=29.44 Aligned_cols=94 Identities=13% Similarity=0.053 Sum_probs=72.4
Q ss_pred ceecchHHHHHHHHHhhhhcccCCCCCCCCCCcEEEEecChhHHHHHHHHHHHHhcCCeEEEe-cCCCHHHHHHHHHhcC
Q 011116 148 GVLLSHLNVIAIIAGYYHVTEETDPNEGPPPHPVSFFTLPMFHVFGFFMLVRAASKGETLVFM-ERFDFEKMLKAVENYR 226 (493)
Q Consensus 148 ~v~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pl~~~~g~~~~~~~l~~G~~~~~~-~~~~~~~~~~~l~~~~ 226 (493)
+..+|..++...+..++..+... ..+.+++|++....|-...+. ...++++..|+.+... +.++..++...++..+
T Consensus 43 g~~~T~~e~~~~~~r~A~~L~~~--~~~i~~gDvV~i~~pNs~~~~-~~~la~~~~Ga~~~~~Np~~~~~ei~~~~~~s~ 119 (537)
T KOG1176|consen 43 GRELTYSELHDRCRRLASALSEL--GLGIKKGDVVGILAPNTPEFV-ELALAVPMAGAVLNPLNPRLTASEIAKQLKDSK 119 (537)
T ss_pred CcEEcHHHHHHHHHHHHHHHHhc--CCCCCCCCEEEEEcCCCHHHH-HHHHHHHHcCccccccCcccCHHHHHHHHHhcC
Confidence 67789988888777777666421 124688999999999766443 4566778888888877 5578999999999999
Q ss_pred eeecccChHHHHHHHhcc
Q 011116 227 VTYMPVSPPLIVAFINSK 244 (493)
Q Consensus 227 ~t~l~~~P~~~~~l~~~~ 244 (493)
+.++++....+..+.+..
T Consensus 120 ~kiif~d~~~~~~i~~~~ 137 (537)
T KOG1176|consen 120 PKLIFVDEDFYDKISEAT 137 (537)
T ss_pred CeEEEEcCchHHHHHHHH
Confidence 999999888877775543
No 187
>PRK07656 long-chain-fatty-acid--CoA ligase; Validated
Probab=47.40 E-value=1.8e+02 Score=29.39 Aligned_cols=84 Identities=11% Similarity=-0.025 Sum_probs=62.2
Q ss_pred ecchHHHHHHHHHhhhhcccCCCCCCCCCCcEEEEecChhHHHHHHHHHHHHhcCCeEEEec-CCCHHHHHHHHHhcCee
Q 011116 150 LLSHLNVIAIIAGYYHVTEETDPNEGPPPHPVSFFTLPMFHVFGFFMLVRAASKGETLVFME-RFDFEKMLKAVENYRVT 228 (493)
Q Consensus 150 ~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pl~~~~g~~~~~~~l~~G~~~~~~~-~~~~~~~~~~l~~~~~t 228 (493)
.+|...+...+..+...+.. .+.++++++....+-.. .....++.++..|+..+..+ ..+.+.+...+++.+++
T Consensus 30 ~~Ty~~l~~~~~~~a~~L~~----~gv~~g~~V~l~~~~~~-~~~~~~la~~~~G~~~v~l~~~~~~~~~~~~l~~~~~~ 104 (513)
T PRK07656 30 RLTYAELNARVRRAAAALAA----LGIGKGDRVAIWAPNSP-HWVIAALGALKAGAVVVPLNTRYTADEAAYILARGDAK 104 (513)
T ss_pred ceeHHHHHHHHHHHHHHHHH----cCCCCCCEEEEECCCCh-HHHHHHHHHHhcCeEEEecCcccCHHHHHHHHhhcCce
Confidence 47888887766666655432 35688999988887654 33466778889999888774 56789999999999999
Q ss_pred ecccChHHHH
Q 011116 229 YMPVSPPLIV 238 (493)
Q Consensus 229 ~l~~~P~~~~ 238 (493)
+++..+....
T Consensus 105 ~ii~~~~~~~ 114 (513)
T PRK07656 105 ALFVLGLFLG 114 (513)
T ss_pred EEEEchhhHH
Confidence 9888766543
No 188
>COG0031 CysK Cysteine synthase [Amino acid transport and metabolism]
Probab=47.10 E-value=91 Score=29.22 Aligned_cols=69 Identities=10% Similarity=0.096 Sum_probs=49.9
Q ss_pred hHHHHHHh---hCC-CCCCCEEEEECCCCCCcHHHHHHHHHHcCCeeccCCCCCCHHHHHHHHhhcCCeEEEEcC
Q 011116 18 TLSHALSK---RDS-LCRKTTSLTSSPLPPSTSPVLYFSLLSLGVVISPANPLSSTSEVSHQIQLSKPSIAFATS 88 (493)
Q Consensus 18 ~lA~~L~~---~~g-l~~gd~V~l~~~~~~~~~~~~~lA~~~~G~~~v~i~~~~~~~~l~~~l~~~~~~~il~~~ 88 (493)
|+|.++-. +.| |++|++|.=-.. +-.-+.+-+.|...|..++.+-|.....+-..+|+..++.+++++.
T Consensus 44 R~A~~mI~~Ae~~G~l~pG~tIVE~TS--GNTGI~LA~vaa~~Gy~~iivmP~~~S~er~~~l~a~GAevi~t~~ 116 (300)
T COG0031 44 RIALYMIEDAEKRGLLKPGGTIVEATS--GNTGIALAMVAAAKGYRLIIVMPETMSQERRKLLRALGAEVILTPG 116 (300)
T ss_pred HHHHHHHHHHHHcCCCCCCCEEEEcCC--ChHHHHHHHHHHHcCCcEEEEeCCCCCHHHHHHHHHcCCEEEEcCC
Confidence 34555522 234 899995554444 5566666677777888888777766677789999999999999987
No 189
>TIGR01136 cysKM cysteine synthases. This model discriminates cysteine synthases (EC 2.5.1.47) (both CysK and CysM) from cystathionine beta-synthase, a protein found primarily in eukaryotes and carrying a C-terminal CBS domain lacking from this protein. Bacterial proteins lacking the CBS domain but otherwise showing resemblamnce to cystathionine beta-synthases and considerable phylogenetic distance from known cysteine synthases were excluded from the seed and score below the trusted cutoff.
Probab=46.41 E-value=97 Score=29.12 Aligned_cols=58 Identities=12% Similarity=0.096 Sum_probs=43.5
Q ss_pred CCCCCEEEEECCCCCCcHHHHHHHHHHcCCeeccCCCCCCHHHHHHHHhhcCCeEEEEcC
Q 011116 29 LCRKTTSLTSSPLPPSTSPVLYFSLLSLGVVISPANPLSSTSEVSHQIQLSKPSIAFATS 88 (493)
Q Consensus 29 l~~gd~V~l~~~~~~~~~~~~~lA~~~~G~~~v~i~~~~~~~~l~~~l~~~~~~~il~~~ 88 (493)
+++|++|+--+ .+-.-..+-++|...|..+..+-|...++.-...++..+++++++..
T Consensus 55 ~~~g~~vv~aS--sGN~g~alA~~a~~~G~~~~i~vp~~~~~~k~~~~~~~GA~v~~~~~ 112 (299)
T TIGR01136 55 LKPGDTIIEAT--SGNTGIALAMVAAAKGYKLILTMPETMSLERRKLLRAYGAELILTPA 112 (299)
T ss_pred CCCCCEEEEeC--CChHHHHHHHHHHHcCCcEEEEECCCCCHHHHHHHHHcCCEEEEeCC
Confidence 47788776444 46667777778888898877776665556667889999999999875
No 190
>KOG0025 consensus Zn2+-binding dehydrogenase (nuclear receptor binding factor-1) [Transcription; Energy production and conversion]
Probab=45.81 E-value=62 Score=30.02 Aligned_cols=65 Identities=8% Similarity=0.065 Sum_probs=51.3
Q ss_pred CCCCCCCEEEEECCCCCCcHHHHHHHHHHcCCeeccC-CCCCCHHHHHHHHhhcCCeEEEEcCCCcc
Q 011116 27 DSLCRKTTSLTSSPLPPSTSPVLYFSLLSLGVVISPA-NPLSSTSEVSHQIQLSKPSIAFATSHTSY 92 (493)
Q Consensus 27 ~gl~~gd~V~l~~~~~~~~~~~~~lA~~~~G~~~v~i-~~~~~~~~l~~~l~~~~~~~il~~~~~~~ 92 (493)
..+++||.|+=... |+.---+++--|-..|..-+-+ ..+-..+++...|+..++..+|++++..+
T Consensus 156 v~L~~GD~vIQNga-nS~VG~~ViQlaka~GiktinvVRdR~~ieel~~~Lk~lGA~~ViTeeel~~ 221 (354)
T KOG0025|consen 156 VQLNKGDSVIQNGA-NSGVGQAVIQLAKALGIKTINVVRDRPNIEELKKQLKSLGATEVITEEELRD 221 (354)
T ss_pred HhcCCCCeeeecCc-ccHHHHHHHHHHHHhCcceEEEeecCccHHHHHHHHHHcCCceEecHHHhcc
Confidence 57899999998888 8766666666666777665544 55666899999999999999999987654
No 191
>PRK08279 long-chain-acyl-CoA synthetase; Validated
Probab=45.73 E-value=2e+02 Score=29.99 Aligned_cols=98 Identities=14% Similarity=0.122 Sum_probs=69.0
Q ss_pred CCCCeEEEEccCCCCCCccceecchHHHHHHHHHhhhhcccCCCCCCCCCCcEEEEecChhHHHHHHHHHHHHhcCCeEE
Q 011116 129 YQSDPAAILYSSGTTGKVKGVLLSHLNVIAIIAGYYHVTEETDPNEGPPPHPVSFFTLPMFHVFGFFMLVRAASKGETLV 208 (493)
Q Consensus 129 ~~~~~~~i~~TSGTTG~pK~v~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pl~~~~g~~~~~~~l~~G~~~~ 208 (493)
.++.++.+.- .-.+|...+...+..+...+.. .|..+++++....+-.... ...++.++..|+..+
T Consensus 50 ~p~~~Ai~~~---------~~~~Ty~eL~~~~~~la~~L~~----~g~~~gd~V~i~~~n~~~~-v~~~lA~~~~G~~~v 115 (600)
T PRK08279 50 HPDRPALLFE---------DQSISYAELNARANRYAHWAAA----RGVGKGDVVALLMENRPEY-LAAWLGLAKLGAVVA 115 (600)
T ss_pred CCCCcEEEeC---------CCcccHHHHHHHHHHHHHHHHh----cCCCCCCEEEEECCCCHHH-HHHHHHHHhcCcEEe
Confidence 4566666541 1347888887766666555432 3568899999888766533 467888899999888
Q ss_pred Ee-cCCCHHHHHHHHHhcCeeecccChHHHHHH
Q 011116 209 FM-ERFDFEKMLKAVENYRVTYMPVSPPLIVAF 240 (493)
Q Consensus 209 ~~-~~~~~~~~~~~l~~~~~t~l~~~P~~~~~l 240 (493)
.. .....+.+...+++.++++++........+
T Consensus 116 ~l~~~~~~~~l~~~l~~~~~~~li~~~~~~~~~ 148 (600)
T PRK08279 116 LLNTQQRGAVLAHSLNLVDAKHLIVGEELVEAF 148 (600)
T ss_pred ecCCCCCHHHHHHHHHhcCCCEEEEChHHHHHH
Confidence 77 456788899999999999988776554433
No 192
>PLN02356 phosphateglycerate kinase
Probab=45.64 E-value=76 Score=31.50 Aligned_cols=58 Identities=16% Similarity=0.025 Sum_probs=43.3
Q ss_pred CCCCCEEEEECCCCCCcHHHHHHHHHHcCCeeccCCCCCCHHHHHHHHhhcCCeEEEEcC
Q 011116 29 LCRKTTSLTSSPLPPSTSPVLYFSLLSLGVVISPANPLSSTSEVSHQIQLSKPSIAFATS 88 (493)
Q Consensus 29 l~~gd~V~l~~~~~~~~~~~~~lA~~~~G~~~v~i~~~~~~~~l~~~l~~~~~~~il~~~ 88 (493)
+++|.+|+-.+. +-.-..+-++|...|..++.+-|...+.+-..+++..++++++++.
T Consensus 101 ~~~~g~VveaSS--GN~g~alA~~aa~~G~~~~ivvP~~~s~~K~~~ir~~GAeVi~v~~ 158 (423)
T PLN02356 101 LFPGGVVTEGSA--GSTAISLATVAPAYGCKCHVVIPDDVAIEKSQILEALGATVERVRP 158 (423)
T ss_pred cCCCCEEEEeCC--HHHHHHHHHHHHHcCCcEEEEECCCCcHHHHHHHHHcCCEEEEECC
Confidence 457777664444 5567778888888998877776666666667899999999999864
No 193
>PRK08008 caiC putative crotonobetaine/carnitine-CoA ligase; Validated
Probab=44.89 E-value=2.8e+02 Score=28.18 Aligned_cols=101 Identities=21% Similarity=0.134 Sum_probs=68.4
Q ss_pred CCCCeEEEEccCCCCCCccceecchHHHHHHHHHhhhhcccCCCCCCCCCCcEEEEecChhHHHHHHHHHHHHhcCCeEE
Q 011116 129 YQSDPAAILYSSGTTGKVKGVLLSHLNVIAIIAGYYHVTEETDPNEGPPPHPVSFFTLPMFHVFGFFMLVRAASKGETLV 208 (493)
Q Consensus 129 ~~~~~~~i~~TSGTTG~pK~v~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pl~~~~g~~~~~~~l~~G~~~~ 208 (493)
.++.++++.-.. .+.. -.+|...+...+..+...+.. .|+.+++++....+..... ...++.++..|+..+
T Consensus 20 ~p~~~a~~~~~~--~~~~--~~~ty~~l~~~v~~la~~L~~----~g~~~~~~v~i~~~n~~~~-~~~~la~~~~G~~~v 90 (517)
T PRK08008 20 YGHKTALIFESS--GGVV--RRYSYLELNEEINRTANLFYS----LGIRKGDKVALHLDNCPEF-IFCWFGLAKIGAIMV 90 (517)
T ss_pred CCCceEEEcccC--CCcc--ceeeHHHHHHHHHHHHHHHHH----cCCCCCCEEEEEcCCCHHH-HHHHHHHHHcCeEEE
Confidence 466666554221 1211 246777776666665554422 3668899999887766533 256678888998888
Q ss_pred Ee-cCCCHHHHHHHHHhcCeeecccChHHHH
Q 011116 209 FM-ERFDFEKMLKAVENYRVTYMPVSPPLIV 238 (493)
Q Consensus 209 ~~-~~~~~~~~~~~l~~~~~t~l~~~P~~~~ 238 (493)
.. +..+.+.+...++..+++.++..+....
T Consensus 91 ~l~~~~~~~~l~~~l~~~~~~~l~~~~~~~~ 121 (517)
T PRK08008 91 PINARLLREESAWILQNSQASLLVTSAQFYP 121 (517)
T ss_pred EcCcccCHHHHHHHHHhcCceEEEEecchhH
Confidence 76 5578899999999999999988776543
No 194
>PF09580 Spore_YhcN_YlaJ: Sporulation lipoprotein YhcN/YlaJ (Spore_YhcN_YlaJ); InterPro: IPR019076 This entry contains YhcN and YlaJ, which are predicted lipoproteins that have been detected as spore proteins but not vegetative proteins in Bacillus subtilis. Both appear to be expressed under control of the RNA polymerase sigma-G factor. The YlaJ-like members of this family have a low-complexity, strongly acidic, 40-residue C-terminal domain.
Probab=44.31 E-value=92 Score=26.52 Aligned_cols=50 Identities=18% Similarity=0.179 Sum_probs=33.1
Q ss_pred hHHHHHHHhcCCCcceEEEEeeeCCCCCeeEEEEEEeCCCCCCCHHHHHHHHHhcC
Q 011116 398 PVELEHLLHSNPEIADAAVIPYPDEEAGQIPMAFVVRKPGSNITEAEIMDFIAKQV 453 (493)
Q Consensus 398 ~~~ie~~l~~~~~v~~~~v~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~l~~~l 453 (493)
...|++.+.+.++|.++.|+...+ ..++.|.+... .....++.+.+++.+
T Consensus 77 a~~i~~~v~~~~~V~~A~vvv~~~-----~a~Vav~~~~~-~~~~~~i~~~V~~~v 126 (177)
T PF09580_consen 77 ADRIANRVKKVPGVEDATVVVTDD-----NAYVAVDLDFN-RFNTKKIKKKVEKAV 126 (177)
T ss_pred HHHHHHHHhcCCCceEEEEEEECC-----EEEEEEEeccc-ccchhHHHHHHHHHH
Confidence 467888999999999999997533 34555555522 444555666665554
No 195
>cd02070 corrinoid_protein_B12-BD B12 binding domain of corrinoid proteins. A family of small methanogenic corrinoid proteins that bind methyl-Co(III) 5-hydroxybenzimidazolylcobamide as a cofactor. They play a role on the methanogenesis from trimethylamine, dimethylamine or monomethylamine, which is initiated by a series of corrinoid-dependent methyltransferases.
Probab=44.28 E-value=2.2e+02 Score=24.89 Aligned_cols=86 Identities=17% Similarity=0.186 Sum_probs=51.2
Q ss_pred EEEEecC-hhHHHHHH-HHHHHHhcCCeEEEe-cCCCHHHHHHHHHhcCeeecccChH------HHHHHHhcccCCCCCC
Q 011116 181 VSFFTLP-MFHVFGFF-MLVRAASKGETLVFM-ERFDFEKMLKAVENYRVTYMPVSPP------LIVAFINSKLTDKYDL 251 (493)
Q Consensus 181 ~~~~~~p-l~~~~g~~-~~~~~l~~G~~~~~~-~~~~~~~~~~~l~~~~~t~l~~~P~------~~~~l~~~~~~~~~~l 251 (493)
.++.+.| -.|..|.. .....-..|-.++.. ...+++++.+.+.+.+++++..+-+ .+..+++..++... .
T Consensus 85 vl~~~~~gd~H~lG~~~v~~~l~~~G~~vi~lG~~~p~~~l~~~~~~~~~d~v~lS~~~~~~~~~~~~~i~~lr~~~~-~ 163 (201)
T cd02070 85 VVIGTVEGDIHDIGKNLVATMLEANGFEVIDLGRDVPPEEFVEAVKEHKPDILGLSALMTTTMGGMKEVIEALKEAGL-R 163 (201)
T ss_pred EEEEecCCccchHHHHHHHHHHHHCCCEEEECCCCCCHHHHHHHHHHcCCCEEEEeccccccHHHHHHHHHHHHHCCC-C
Confidence 3444444 47777773 333344577777755 4578999999999999998655432 23333333322221 1
Q ss_pred CCeeEEEecCCCCCHHH
Q 011116 252 SSLQLLGCGGAPLGKEV 268 (493)
Q Consensus 252 ~~lr~v~~~Ge~~~~~~ 268 (493)
..+ .++.||..++++.
T Consensus 164 ~~~-~i~vGG~~~~~~~ 179 (201)
T cd02070 164 DKV-KVMVGGAPVNQEF 179 (201)
T ss_pred cCC-eEEEECCcCCHHH
Confidence 123 4677888888763
No 196
>TIGR02316 propion_prpE propionate--CoA ligase. This family contains one of three readily separable clades of proteins in the group of acetate and propionate--CoA ligases. Characterized members of this family act on propionate. From propionyl-CoA, there is a cyclic degradation pathway: it is ligated by PrpC to the TCA cycle intermediate oxaloacetate, acted upon further by PrpD and an aconitase, then cleaved by PrpB to pyruvate and the TCA cycle intermediate succinate.
Probab=44.11 E-value=99 Score=32.62 Aligned_cols=98 Identities=12% Similarity=0.127 Sum_probs=70.0
Q ss_pred CCCCeEEEEccCCCCCCccceecchHHHHHHHHHhhhhcccCCCCCCCCCCcEEEEecChhHHHHHHHHHHHHhcCCeEE
Q 011116 129 YQSDPAAILYSSGTTGKVKGVLLSHLNVIAIIAGYYHVTEETDPNEGPPPHPVSFFTLPMFHVFGFFMLVRAASKGETLV 208 (493)
Q Consensus 129 ~~~~~~~i~~TSGTTG~pK~v~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pl~~~~g~~~~~~~l~~G~~~~ 208 (493)
.++.++.+... ..+|. .-.+|..++...+..+...+.. .|+.++|++...+|..-- ....++.++..|+..+
T Consensus 65 ~p~~~Al~~~~-~~~~~--~~~~Ty~eL~~~v~~lA~~L~~----~Gv~~Gd~V~i~~~n~~e-~v~~~lA~~~~Gav~v 136 (628)
T TIGR02316 65 RGEQLALVTVS-SETGQ--ERTLTYRQLHREVNVFASALRA----LGVGRGDRVLIYMPMIAE-AVFAMLACARIGAIHS 136 (628)
T ss_pred CCCCeEEEEEc-CCCCc--eEEEeHHHHHHHHHHHHHHHHH----cCCCCCCEEEEEcCCCHH-HHHHHHHHHHhCCEEE
Confidence 45666665432 22232 2347888887777776666543 477999999999987643 3456788899999887
Q ss_pred Ee-cCCCHHHHHHHHHhcCeeecccCh
Q 011116 209 FM-ERFDFEKMLKAVENYRVTYMPVSP 234 (493)
Q Consensus 209 ~~-~~~~~~~~~~~l~~~~~t~l~~~P 234 (493)
.. +.+..+++...++..++.++++..
T Consensus 137 pl~~~~~~~~l~~~l~~~~~~~li~~~ 163 (628)
T TIGR02316 137 VVFGGFASHSLALRIDDATPKLIVSAD 163 (628)
T ss_pred ecCCCCCHHHHHHHHHhcCceEEEECC
Confidence 76 567889999999999999888754
No 197
>PRK05605 long-chain-fatty-acid--CoA ligase; Validated
Probab=44.07 E-value=1.2e+02 Score=31.39 Aligned_cols=86 Identities=9% Similarity=-0.021 Sum_probs=64.7
Q ss_pred ecchHHHHHHHHHhhhhcccCCCCCCCCCCcEEEEecChhHHHHHHHHHHHHhcCCeEEEe-cCCCHHHHHHHHHhcCee
Q 011116 150 LLSHLNVIAIIAGYYHVTEETDPNEGPPPHPVSFFTLPMFHVFGFFMLVRAASKGETLVFM-ERFDFEKMLKAVENYRVT 228 (493)
Q Consensus 150 ~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pl~~~~g~~~~~~~l~~G~~~~~~-~~~~~~~~~~~l~~~~~t 228 (493)
.+|..++...+..+...+.. .|++++|++...+|.... ....++.++..|+..+.. +..+.+++...+++.++.
T Consensus 57 ~~Ty~ql~~~~~~~A~~L~~----~gi~~gd~V~l~~~n~~~-~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~ 131 (573)
T PRK05605 57 TTTYAELGKQVRRAAAGLRA----LGVRPGDRVAIVLPNCPQ-HIVAFYAVLRLGAVVVEHNPLYTAHELEHPFEDHGAR 131 (573)
T ss_pred cccHHHHHHHHHHHHHHHHH----hCCCCCCEEEEECCCCHH-HHHHHHHHHhcCcEEeecCcCCCHHHHHHHHhccCCc
Confidence 47888887766666655532 356889999998887654 235678888899988877 557889999999999999
Q ss_pred ecccChHHHHHH
Q 011116 229 YMPVSPPLIVAF 240 (493)
Q Consensus 229 ~l~~~P~~~~~l 240 (493)
.++........+
T Consensus 132 ~ii~~~~~~~~~ 143 (573)
T PRK05605 132 VAIVWDKVAPTV 143 (573)
T ss_pred EEEechhhHHHH
Confidence 998877655443
No 198
>PRK08315 AMP-binding domain protein; Validated
Probab=43.70 E-value=73 Score=32.89 Aligned_cols=69 Identities=4% Similarity=-0.038 Sum_probs=51.4
Q ss_pred HHHHHhhCCCCCCCEEEEECCCC--CCcHHHHHHHHHHcCCeeccCCCCCCHHHHHHHHhhcCCeEEEEcCC
Q 011116 20 SHALSKRDSLCRKTTSLTSSPLP--PSTSPVLYFSLLSLGVVISPANPLSSTSEVSHQIQLSKPSIAFATSH 89 (493)
Q Consensus 20 A~~L~~~~gl~~gd~V~l~~~~~--~~~~~~~~lA~~~~G~~~v~i~~~~~~~~l~~~l~~~~~~~il~~~~ 89 (493)
+..+....+++++|++...++ - ...++..+++++..|+..+.......+..+...+++.++..+...+.
T Consensus 228 ~~~~~~~~~~~~~d~~~~~~p-~~~~~g~~~~~~~~l~~g~~~~~~~~~~~~~~~~~~l~~~~~t~~~~~P~ 298 (559)
T PRK08315 228 GYFIGEAMKLTEEDRLCIPVP-LYHCFGMVLGNLACVTHGATMVYPGEGFDPLATLAAVEEERCTALYGVPT 298 (559)
T ss_pred HHHHHHhcCCCCCceEEEecC-cHHHHHHHHHHHHHHhccceEEEecCCCCHHHHHHHHHHcCCeEEecchH
Confidence 344445578999999988877 3 23344556788888988875556677888899999999998887764
No 199
>PRK07514 malonyl-CoA synthase; Validated
Probab=42.94 E-value=1.5e+02 Score=29.95 Aligned_cols=86 Identities=7% Similarity=0.029 Sum_probs=63.4
Q ss_pred eecchHHHHHHHHHhhhhcccCCCCCCCCCCcEEEEecChhHHHHHHHHHHHHhcCCeEEEec-CCCHHHHHHHHHhcCe
Q 011116 149 VLLSHLNVIAIIAGYYHVTEETDPNEGPPPHPVSFFTLPMFHVFGFFMLVRAASKGETLVFME-RFDFEKMLKAVENYRV 227 (493)
Q Consensus 149 v~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pl~~~~g~~~~~~~l~~G~~~~~~~-~~~~~~~~~~l~~~~~ 227 (493)
..+|...+...+..+...+.. .|+.+++++....+-.. -....++.++..|+..+..+ ..+..++...++..++
T Consensus 27 ~~~Ty~eL~~~~~~la~~L~~----~g~~~gd~v~i~~~~~~-e~~v~~la~~~~G~~~v~l~~~~~~~~~~~~l~~~~~ 101 (504)
T PRK07514 27 LRYTYGDLDAASARLANLLVA----LGVKPGDRVAVQVEKSP-EALALYLATLRAGAVFLPLNTAYTLAELDYFIGDAEP 101 (504)
T ss_pred CEEcHHHHHHHHHHHHHHHHH----cCCCCCCEEEEECCCCH-HHHHHHHHHHHcCcEEEECCCCCCHHHHHHHHHhCCC
Confidence 457888886666665555432 36689999988888663 33466788899999888774 5678899999999999
Q ss_pred eecccChHHHHH
Q 011116 228 TYMPVSPPLIVA 239 (493)
Q Consensus 228 t~l~~~P~~~~~ 239 (493)
+.++..+.....
T Consensus 102 ~~ii~~~~~~~~ 113 (504)
T PRK07514 102 ALVVCDPANFAW 113 (504)
T ss_pred cEEEEccchhHH
Confidence 998887765543
No 200
>COG0318 CaiC Acyl-CoA synthetases (AMP-forming)/AMP-acid ligases II [Lipid metabolism / Secondary metabolites biosynthesis, transport, and catabolism]
Probab=42.69 E-value=3.2e+02 Score=28.17 Aligned_cols=95 Identities=14% Similarity=0.088 Sum_probs=69.1
Q ss_pred CCCCeEEEEccCCCCCCccceecchHHHHHHHHHhhhhcccCCCCCCCCCCcEEEEecChhHHHHHHHHHHHHhcCCeEE
Q 011116 129 YQSDPAAILYSSGTTGKVKGVLLSHLNVIAIIAGYYHVTEETDPNEGPPPHPVSFFTLPMFHVFGFFMLVRAASKGETLV 208 (493)
Q Consensus 129 ~~~~~~~i~~TSGTTG~pK~v~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pl~~~~g~~~~~~~l~~G~~~~ 208 (493)
.++.++.+...-+. .+|...+...+..+...+.. .++.++|++...+|-..- .+..+++++..|+..+
T Consensus 24 ~~~~~a~~~~~~~~-------~~Ty~el~~~~~~~A~~L~~----~~v~~gdrVail~~N~~e-~~~~~~a~~~~Gav~v 91 (534)
T COG0318 24 NPDRPALIFLGRGG-------RLTYRELDRRANRLAAALQA----LGVKPGDRVAILLPNSPE-FLIAFLAALRAGAVAV 91 (534)
T ss_pred CCCceEEEEcCCCc-------eeeHHHHHHHHHHHHHHHHH----cCCCCCCEEEEECCCCHH-HHHHHHHHHhcCEEEe
Confidence 45555665554333 68888888777777666643 235789999888887643 2457788888999988
Q ss_pred EecC-CCHHHHHHHHHhcCeeecccChH
Q 011116 209 FMER-FDFEKMLKAVENYRVTYMPVSPP 235 (493)
Q Consensus 209 ~~~~-~~~~~~~~~l~~~~~t~l~~~P~ 235 (493)
..+. ....++...++..++..++....
T Consensus 92 pln~~~~~~~l~~~l~~~~~~~~~~~~~ 119 (534)
T COG0318 92 PLNPRLTPRELAYILNDAGAKVLITSAE 119 (534)
T ss_pred ecCcccCHHHHHHHHHhcCCeEEEEccc
Confidence 8854 57888999999988988888766
No 201
>PRK11658 UDP-4-amino-4-deoxy-L-arabinose--oxoglutarate aminotransferase; Provisional
Probab=42.64 E-value=89 Score=30.57 Aligned_cols=66 Identities=14% Similarity=0.028 Sum_probs=42.3
Q ss_pred chhhhHHHHHHhhCCCCCCCEEEEECCCCCCcHHHHHHHHHHcCCeeccCCCC-----CCHHHHHHHHhhcCCeEEE
Q 011116 14 SARFTLSHALSKRDSLCRKTTSLTSSPLPPSTSPVLYFSLLSLGVVISPANPL-----SSTSEVSHQIQLSKPSIAF 85 (493)
Q Consensus 14 ~~~~~lA~~L~~~~gl~~gd~V~l~~~~~~~~~~~~~lA~~~~G~~~v~i~~~-----~~~~~l~~~l~~~~~~~il 85 (493)
++...+...| ...++++||.|++-.+ .+.....++...|+.++.++.+ ...+.+...+.. +.++|+
T Consensus 56 sgt~al~lal-~al~~~~Gd~Viv~~~----~~~~~~~~~~~~G~~~v~vd~~~~~~~~d~~~l~~~i~~-~tkav~ 126 (379)
T PRK11658 56 SATAGMHITL-MALGIGPGDEVITPSL----TWVSTLNMIVLLGATPVMVDVDRDTLMVTPEAIEAAITP-RTKAII 126 (379)
T ss_pred CHHHHHHHHH-HHcCCCCCCEEEECCC----cHHHHHHHHHHcCCEEEEEecCCCcCCcCHHHHHHhccc-CCeEEE
Confidence 4444445555 5567899999876444 4455556667789887766432 457777777653 566666
No 202
>PLN02861 long-chain-fatty-acid-CoA ligase
Probab=42.39 E-value=1.8e+02 Score=31.02 Aligned_cols=88 Identities=14% Similarity=0.073 Sum_probs=66.2
Q ss_pred eecchHHHHHHHHHhhhhcccCCCCCCCCCCcEEEEecChhHHHHHHHHHHHHhcCCeEEEe-cCCCHHHHHHHHHhcCe
Q 011116 149 VLLSHLNVIAIIAGYYHVTEETDPNEGPPPHPVSFFTLPMFHVFGFFMLVRAASKGETLVFM-ERFDFEKMLKAVENYRV 227 (493)
Q Consensus 149 v~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pl~~~~g~~~~~~~l~~G~~~~~~-~~~~~~~~~~~l~~~~~ 227 (493)
..+|...+...+..+...+.. .|+.++|++...++-..-+ ....+.++..|+..+-. +....+++...+++.++
T Consensus 76 ~~~Ty~el~~~v~~lA~~L~~----~Gv~~gd~Vai~~~n~~e~-~~~~lA~~~~G~v~vpl~~~~~~~~l~~il~~s~~ 150 (660)
T PLN02861 76 VWLTYKEVYDAAIRIGSAIRS----RGVNPGDRCGIYGSNCPEW-IIAMEACNSQGITYVPLYDTLGANAVEFIINHAEV 150 (660)
T ss_pred eEEEHHHHHHHHHHHHHHHHH----cCCCCCCEEEEEcCCCHHH-HHHHHHHHHcCCeEEEecCCCCHHHHHHHHHcCCC
Confidence 357888887777776666533 3678999999888865432 35677888999988876 55788999999999999
Q ss_pred eecccChHHHHHHH
Q 011116 228 TYMPVSPPLIVAFI 241 (493)
Q Consensus 228 t~l~~~P~~~~~l~ 241 (493)
+++++....+..+.
T Consensus 151 ~~v~~~~~~~~~~~ 164 (660)
T PLN02861 151 SIAFVQESKISSIL 164 (660)
T ss_pred CEEEECHHHHHHHH
Confidence 99988766655443
No 203
>PLN02574 4-coumarate--CoA ligase-like
Probab=42.33 E-value=2.3e+02 Score=29.34 Aligned_cols=87 Identities=15% Similarity=0.103 Sum_probs=61.9
Q ss_pred ecchHHHHHHHHHhhhhcccCCCCCCCCCCcEEEEecChhHHHHHHHHHHHHhcCCeEEEec-CCCHHHHHHHHHhcCee
Q 011116 150 LLSHLNVIAIIAGYYHVTEETDPNEGPPPHPVSFFTLPMFHVFGFFMLVRAASKGETLVFME-RFDFEKMLKAVENYRVT 228 (493)
Q Consensus 150 ~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pl~~~~g~~~~~~~l~~G~~~~~~~-~~~~~~~~~~l~~~~~t 228 (493)
.+|...+......+...+.. ..|+.++|++....+-.. .....++.++..|+..+..+ ..+.+++...++..++.
T Consensus 66 ~~Ty~el~~~~~~lA~~L~~---~~G~~~gd~V~i~~~n~~-~~~~~~la~~~~G~v~v~l~p~~~~~~l~~~l~~~~~~ 141 (560)
T PLN02574 66 SISYSELQPLVKSMAAGLYH---VMGVRQGDVVLLLLPNSV-YFPVIFLAVLSLGGIVTTMNPSSSLGEIKKRVVDCSVG 141 (560)
T ss_pred cccHHHHHHHHHHHHHHHHH---HhCCCCCCEEEEECCCcc-hHHHHHHHHHHhCeEEeCcCcccCHHHHHHHHHhcCCE
Confidence 36777776666655555421 025689999999988553 33356788888999888774 46788999999999998
Q ss_pred ecccChHHHHHH
Q 011116 229 YMPVSPPLIVAF 240 (493)
Q Consensus 229 ~l~~~P~~~~~l 240 (493)
.++..+.....+
T Consensus 142 ~~~~~~~~~~~~ 153 (560)
T PLN02574 142 LAFTSPENVEKL 153 (560)
T ss_pred EEEECHHHHHHH
Confidence 888777655444
No 204
>cd02069 methionine_synthase_B12_BD B12 binding domain of methionine synthase. This domain binds methylcobalamin, which it uses as an intermediate methyl carrier from methyltetrahydrofolate (CH3H4folate) to homocysteine (Hcy).
Probab=42.31 E-value=2.5e+02 Score=24.92 Aligned_cols=90 Identities=19% Similarity=0.197 Sum_probs=56.4
Q ss_pred CcEEEEecC-hhHHHHH-HHHHHHHhcCCeEEEec-CCCHHHHHHHHHhcCeeecccChHH------HHHHHhcccCCCC
Q 011116 179 HPVSFFTLP-MFHVFGF-FMLVRAASKGETLVFME-RFDFEKMLKAVENYRVTYMPVSPPL------IVAFINSKLTDKY 249 (493)
Q Consensus 179 ~~~~~~~~p-l~~~~g~-~~~~~~l~~G~~~~~~~-~~~~~~~~~~l~~~~~t~l~~~P~~------~~~l~~~~~~~~~ 249 (493)
+..++.+.+ =.|..|. .....--..|..++... ..+++++.+.+.+.+++++..+-.+ +..+++...+.+.
T Consensus 89 ~~vvl~t~~gd~HdiG~~iv~~~l~~~G~~Vi~LG~~vp~e~~v~~~~~~~~~~V~lS~~~~~~~~~~~~~i~~L~~~~~ 168 (213)
T cd02069 89 GKIVLATVKGDVHDIGKNLVGVILSNNGYEVIDLGVMVPIEKILEAAKEHKADIIGLSGLLVPSLDEMVEVAEEMNRRGI 168 (213)
T ss_pred CeEEEEeCCCchhHHHHHHHHHHHHhCCCEEEECCCCCCHHHHHHHHHHcCCCEEEEccchhccHHHHHHHHHHHHhcCC
Confidence 334444444 3777777 44444455777877774 5789999999999999986554322 2333333322221
Q ss_pred CCCCeeEEEecCCCCCHHHHHHH
Q 011116 250 DLSSLQLLGCGGAPLGKEVTLKF 272 (493)
Q Consensus 250 ~l~~lr~v~~~Ge~~~~~~~~~~ 272 (493)
.++ +++||.+++++..+..
T Consensus 169 ---~~~-i~vGG~~~~~~~~~~~ 187 (213)
T cd02069 169 ---KIP-LLIGGAATSRKHTAVK 187 (213)
T ss_pred ---CCe-EEEEChhcCHHHHhhh
Confidence 333 6778999998887653
No 205
>TIGR03588 PseC UDP-4-keto-6-deoxy-N-acetylglucosamine 4-aminotransferase. This family of enzymes are aminotransferases of the pfam01041 family involved in the biosynthesis of pseudaminic acid. They convert UDP-4-keto-6-deoxy-N-acetylglucosamine into UDP-4-amino-4,6-dideoxy-N-acetylgalactose. Pseudaminic acid has a role in surface polysaccharide in Pseudomonas as well as in the modification of flagellin in Campylobacter and Helicobacter species.
Probab=41.80 E-value=1.1e+02 Score=29.79 Aligned_cols=69 Identities=13% Similarity=-0.009 Sum_probs=44.4
Q ss_pred chhhhHHHHHHhhCCCCCCCEEEEECCCCCCcHHHHHHHHHHcCCeeccCCC-----CCCHHHHHHHHhh---cCCeEEE
Q 011116 14 SARFTLSHALSKRDSLCRKTTSLTSSPLPPSTSPVLYFSLLSLGVVISPANP-----LSSTSEVSHQIQL---SKPSIAF 85 (493)
Q Consensus 14 ~~~~~lA~~L~~~~gl~~gd~V~l~~~~~~~~~~~~~lA~~~~G~~~v~i~~-----~~~~~~l~~~l~~---~~~~~il 85 (493)
+++..+...+ ...++++||.|++-.+ .+....-++...|+.++.++. ....+.+...++. -++++++
T Consensus 52 sgt~al~~~l-~al~~~~Gd~Viv~~~----~~~~~~~~~~~~G~~~~~~~~~~~~~~~d~~~l~~~i~~~~~~~t~~v~ 126 (380)
T TIGR03588 52 SATSALHIAC-LALGVGPGDRVWTTPI----TFVATANCALYCGAKVDFVDIDPDTGNIDEDALEKKLAAAKGKLPKAIV 126 (380)
T ss_pred CHHHHHHHHH-HHcCCCCCCEEEeCCc----chHHHHHHHHHcCCEEEEEecCCCcCCcCHHHHHHHhhcccCCCceEEE
Confidence 4455445555 5567899999776555 345555667788988766543 2467888888763 3566666
Q ss_pred Ec
Q 011116 86 AT 87 (493)
Q Consensus 86 ~~ 87 (493)
..
T Consensus 127 ~~ 128 (380)
T TIGR03588 127 PV 128 (380)
T ss_pred Ee
Confidence 43
No 206
>PLN02430 long-chain-fatty-acid-CoA ligase
Probab=41.65 E-value=4.6e+02 Score=27.90 Aligned_cols=87 Identities=9% Similarity=0.021 Sum_probs=64.8
Q ss_pred ecchHHHHHHHHHhhhhcccCCCCCCCCCCcEEEEecChhHHHHHHHHHHHHhcCCeEEEe-cCCCHHHHHHHHHhcCee
Q 011116 150 LLSHLNVIAIIAGYYHVTEETDPNEGPPPHPVSFFTLPMFHVFGFFMLVRAASKGETLVFM-ERFDFEKMLKAVENYRVT 228 (493)
Q Consensus 150 ~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pl~~~~g~~~~~~~l~~G~~~~~~-~~~~~~~~~~~l~~~~~t 228 (493)
.+|...+...+..+...+.. .|+.++|++...++-..-. ....+.++..|+..+-. +..+.+++...++..+++
T Consensus 76 ~~Ty~el~~~v~~lA~~L~~----~Gv~~gd~V~i~~~n~~ew-~~~~lA~~~~G~v~vpl~~~~~~~~l~~il~~~~~~ 150 (660)
T PLN02430 76 WKTYKEVYEEVLQIGSALRA----SGAEPGSRVGIYGSNCPQW-IVAMEACAAHSLICVPLYDTLGPGAVDYIVDHAEID 150 (660)
T ss_pred EEEHHHHHHHHHHHHHHHHH----cCCCCCCEEEEEcCCCHHH-HHHHHHHHHcCCeEEEeccCCCHHHHHHHHhccCCC
Confidence 46888887777666665532 3678999998888865532 24677888899888866 557889999999999999
Q ss_pred ecccChHHHHHHH
Q 011116 229 YMPVSPPLIVAFI 241 (493)
Q Consensus 229 ~l~~~P~~~~~l~ 241 (493)
++++....+..++
T Consensus 151 ~v~~~~~~~~~~~ 163 (660)
T PLN02430 151 FVFVQDKKIKELL 163 (660)
T ss_pred EEEECHHHHHHHH
Confidence 9998776554444
No 207
>PRK13383 acyl-CoA synthetase; Provisional
Probab=41.44 E-value=1.4e+02 Score=30.36 Aligned_cols=86 Identities=9% Similarity=-0.000 Sum_probs=62.9
Q ss_pred ecchHHHHHHHHHhhhhcccCCCCCCCCCCcEEEEecChhHHHHHHHHHHHHhcCCeEEEe-cCCCHHHHHHHHHhcCee
Q 011116 150 LLSHLNVIAIIAGYYHVTEETDPNEGPPPHPVSFFTLPMFHVFGFFMLVRAASKGETLVFM-ERFDFEKMLKAVENYRVT 228 (493)
Q Consensus 150 ~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pl~~~~g~~~~~~~l~~G~~~~~~-~~~~~~~~~~~l~~~~~t 228 (493)
.+|...+...+..+...+.. .|..+++++...++..- .....++.++..|+..+.. +....+++...+++.+++
T Consensus 60 ~lTy~el~~~~~~la~~L~~----~gi~~g~~V~i~~~~~~-~~~~~~la~~~~G~v~vpl~~~~~~~~l~~~l~~~~~~ 134 (516)
T PRK13383 60 ALSYRELQRATESLARRLTR----DGVAPGRAVGVMCRNGR-GFVTAVFAVGLLGADVVPISTEFRSDALAAALRAHHIS 134 (516)
T ss_pred cEeHHHHHHHHHHHHHHHHh----cCCCCCCEEEEECCCCH-HHHHHHHHHHHhCeEEEEcCccCCHHHHHHHHhcCCCC
Confidence 46777777666666665532 25688999988887544 2335677888889988877 456789999999999999
Q ss_pred ecccChHHHHHH
Q 011116 229 YMPVSPPLIVAF 240 (493)
Q Consensus 229 ~l~~~P~~~~~l 240 (493)
.++..+.....+
T Consensus 135 ~ii~~~~~~~~~ 146 (516)
T PRK13383 135 TVVADNEFAERI 146 (516)
T ss_pred EEEEchhHHHHH
Confidence 998877665443
No 208
>TIGR01733 AA-adenyl-dom amino acid adenylation domain. This domain is a subset of the AMP-binding domain found in Pfam (pfam00501) which also hits substrate--CoA ligases and luciferases. Sequences scoring in between trusted and noise for this model may be ambiguous as to whether they activate amino acids or other molecules lacking an alpha amino group.
Probab=41.26 E-value=1.3e+02 Score=29.42 Aligned_cols=65 Identities=12% Similarity=0.112 Sum_probs=51.7
Q ss_pred CCCCCcEEEEecChhHHHHHHHHHHHHhcCCeEEEec-CCCHHHHHHHHHhcCeeecccChHHHHHH
Q 011116 175 GPPPHPVSFFTLPMFHVFGFFMLVRAASKGETLVFME-RFDFEKMLKAVENYRVTYMPVSPPLIVAF 240 (493)
Q Consensus 175 ~~~~~~~~~~~~pl~~~~g~~~~~~~l~~G~~~~~~~-~~~~~~~~~~l~~~~~t~l~~~P~~~~~l 240 (493)
|.+++|++....|-.. .....++.++..|+..+..+ ....+.+...+++.+++.++..+.....+
T Consensus 21 g~~~gd~v~l~~~n~~-~~~~~~~a~~~~G~~~v~~~~~~~~~~~~~~l~~~~~~~ii~~~~~~~~~ 86 (408)
T TIGR01733 21 GVGPGDRVAVLLERSA-ELVVAILAVLKAGAAYVPLDPAYPAERLAFILEDAGARLLLTDSALASRL 86 (408)
T ss_pred CCCCCCEEEEEeCCCH-HHHHHHHHHHHhCCEEEEcCCCCCHHHHHHHHHhcCCCEEEEcCchhhhc
Confidence 4688999999888774 34467888899999988774 56788999999999999998887755444
No 209
>PRK13388 acyl-CoA synthetase; Provisional
Probab=40.30 E-value=2.5e+02 Score=28.90 Aligned_cols=84 Identities=13% Similarity=-0.053 Sum_probs=61.9
Q ss_pred ecchHHHHHHHHHhhhhcccCCCCCCC-CCCcEEEEecChhHHHHHHHHHHHHhcCCeEEEe-cCCCHHHHHHHHHhcCe
Q 011116 150 LLSHLNVIAIIAGYYHVTEETDPNEGP-PPHPVSFFTLPMFHVFGFFMLVRAASKGETLVFM-ERFDFEKMLKAVENYRV 227 (493)
Q Consensus 150 ~~t~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~pl~~~~g~~~~~~~l~~G~~~~~~-~~~~~~~~~~~l~~~~~ 227 (493)
.+|...+......+...+.. .|. .+++++...++-.... ...++.++..|+..+.. +....+++...+++.++
T Consensus 26 ~lTy~el~~~~~~la~~L~~----~g~~~~~~~V~i~~~n~~~~-v~~~lA~~~~Ga~~v~l~p~~~~~~l~~~l~~~~~ 100 (540)
T PRK13388 26 TWTWREVLAEAAARAAALIA----LADPDRPLHVGVLLGNTPEM-LFWLAAAALGGYVLVGLNTTRRGAALAADIRRADC 100 (540)
T ss_pred eeeHHHHHHHHHHHHHHHHH----hcCCCCCCEEEEECCCCcHH-HHHHHHHHhCCCEEEEecccCChHHHHHHHHhcCC
Confidence 57888887777766665533 355 5788988888865542 35678889999998877 45678899999999999
Q ss_pred eecccChHHHH
Q 011116 228 TYMPVSPPLIV 238 (493)
Q Consensus 228 t~l~~~P~~~~ 238 (493)
+.++.......
T Consensus 101 ~~~i~~~~~~~ 111 (540)
T PRK13388 101 QLLVTDAEHRP 111 (540)
T ss_pred CEEEEChhhhH
Confidence 98887665443
No 210
>PRK13391 acyl-CoA synthetase; Provisional
Probab=40.18 E-value=2.8e+02 Score=28.16 Aligned_cols=99 Identities=11% Similarity=0.033 Sum_probs=69.3
Q ss_pred CCCCeEEEEccCCCCCCccceecchHHHHHHHHHhhhhcccCCCCCCCCCCcEEEEecChhHHHHHHHHHHHHhcCCeEE
Q 011116 129 YQSDPAAILYSSGTTGKVKGVLLSHLNVIAIIAGYYHVTEETDPNEGPPPHPVSFFTLPMFHVFGFFMLVRAASKGETLV 208 (493)
Q Consensus 129 ~~~~~~~i~~TSGTTG~pK~v~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pl~~~~g~~~~~~~l~~G~~~~ 208 (493)
.++.++.+...++ -.+|...+...+..+...+.. .|+.+++++....+-.... ...++.++..|+..+
T Consensus 10 ~p~~~a~~~~~~~-------~~~ty~~l~~~~~~la~~L~~----~g~~~~~~V~v~~~~~~~~-~~~~~a~~~~G~~~~ 77 (511)
T PRK13391 10 TPDKPAVIMASTG-------EVVTYRELDERSNRLAHLFRS----LGLKRGDHVAIFMENNLRY-LEVCWAAERSGLYYT 77 (511)
T ss_pred CCCceEEEecCCC-------CEeeHHHHHHHHHHHHHHHHH----cCCCCCCEEEEECCCCHHH-HHHHHHHHHhccEEe
Confidence 4566666554332 247888887666666555532 3567899998887766533 345778888999888
Q ss_pred Ee-cCCCHHHHHHHHHhcCeeecccChHHHHH
Q 011116 209 FM-ERFDFEKMLKAVENYRVTYMPVSPPLIVA 239 (493)
Q Consensus 209 ~~-~~~~~~~~~~~l~~~~~t~l~~~P~~~~~ 239 (493)
.. ...+.+.+...++..++..+...+.....
T Consensus 78 ~l~~~~~~~~l~~~l~~~~~~~li~~~~~~~~ 109 (511)
T PRK13391 78 CVNSHLTPAEAAYIVDDSGARALITSAAKLDV 109 (511)
T ss_pred ccccccCHHHHHHHHhccCCcEEEEchhhHHH
Confidence 77 45678999999999999988887765433
No 211
>PLN02330 4-coumarate--CoA ligase-like 1
Probab=40.05 E-value=2e+02 Score=29.62 Aligned_cols=97 Identities=11% Similarity=0.046 Sum_probs=67.1
Q ss_pred CCCCeEEEEccCCCCCCccceecchHHHHHHHHHhhhhcccCCCCCCCCCCcEEEEecChhHHHHHHHHHHHHhcCCeEE
Q 011116 129 YQSDPAAILYSSGTTGKVKGVLLSHLNVIAIIAGYYHVTEETDPNEGPPPHPVSFFTLPMFHVFGFFMLVRAASKGETLV 208 (493)
Q Consensus 129 ~~~~~~~i~~TSGTTG~pK~v~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pl~~~~g~~~~~~~l~~G~~~~ 208 (493)
.+++++.+.... | ..+|..++...+..+...+.. .|+.+++++...++-.... ...++.++..|+..+
T Consensus 41 ~p~~~a~~~~~~---~----~~~Ty~~l~~~~~~la~~L~~----~g~~~g~~V~i~~~~~~~~-~~~~lA~~~~G~~~v 108 (546)
T PLN02330 41 YADKVAFVEAVT---G----KAVTYGEVVRDTRRFAKALRS----LGLRKGQVVVVVLPNVAEY-GIVALGIMAAGGVFS 108 (546)
T ss_pred CCCccEEEecCC---C----CcccHHHHHHHHHHHHHHHHH----hCCCCCCEEEEECCCchHH-HHHHHHHHHhCcEec
Confidence 456666553222 2 357888887776666655532 3668899998887766533 356788889999887
Q ss_pred Eec-CCCHHHHHHHHHhcCeeecccChHHH
Q 011116 209 FME-RFDFEKMLKAVENYRVTYMPVSPPLI 237 (493)
Q Consensus 209 ~~~-~~~~~~~~~~l~~~~~t~l~~~P~~~ 237 (493)
..+ ....+++...++..++.+++..+..+
T Consensus 109 pl~~~~~~~~l~~~l~~~~~~~~i~~~~~~ 138 (546)
T PLN02330 109 GANPTALESEIKKQAEAAGAKLIVTNDTNY 138 (546)
T ss_pred cCCccCCHHHHHHHHHhcCCeEEEEccchh
Confidence 664 45778899999999988887765543
No 212
>PRK07798 acyl-CoA synthetase; Validated
Probab=40.02 E-value=2.9e+02 Score=28.06 Aligned_cols=87 Identities=8% Similarity=-0.088 Sum_probs=61.4
Q ss_pred eecchHHHHHHHHHhhhhcccCCCCCCCCCCcEEEEecChhHHHHHHHHHHHHhcCCeEEEe-cCCCHHHHHHHHHhcCe
Q 011116 149 VLLSHLNVIAIIAGYYHVTEETDPNEGPPPHPVSFFTLPMFHVFGFFMLVRAASKGETLVFM-ERFDFEKMLKAVENYRV 227 (493)
Q Consensus 149 v~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pl~~~~g~~~~~~~l~~G~~~~~~-~~~~~~~~~~~l~~~~~ 227 (493)
-.+|...+...+..+...+.. .|+.+++++...++-... .....+.++..|+..+.. .....+++...+++.++
T Consensus 27 ~~~ty~el~~~~~~la~~L~~----~g~~~~~~v~v~~~n~~~-~~~~~~a~~~~G~~~v~l~~~~~~~~l~~~l~~~~~ 101 (533)
T PRK07798 27 RRLTYAELEERANRLAHYLIA----QGLGPGDHVGIYARNRIE-YVEAMLGAFKARAVPVNVNYRYVEDELRYLLDDSDA 101 (533)
T ss_pred ceeeHHHHHHHHHHHHHHHHH----cCCCCCCEEEEEcCCCHH-HHHHHHHHHhcCeEEEecCcCCCHHHHHHHHhhcCC
Confidence 357778887666666555532 356788988887754432 235677788889888877 45678899999999999
Q ss_pred eecccChHHHHHH
Q 011116 228 TYMPVSPPLIVAF 240 (493)
Q Consensus 228 t~l~~~P~~~~~l 240 (493)
..++........+
T Consensus 102 ~~~~~~~~~~~~~ 114 (533)
T PRK07798 102 VALVYEREFAPRV 114 (533)
T ss_pred CEEEEchhhHHHH
Confidence 9888776654444
No 213
>cd01561 CBS_like CBS_like: This subgroup includes Cystathionine beta-synthase (CBS) and Cysteine synthase. CBS is a unique heme-containing enzyme that catalyzes a pyridoxal 5'-phosphate (PLP)-dependent condensation of serine and homocysteine to give cystathionine. Deficiency of CBS leads to homocystinuria, an inherited disease of sulfur metabolism characterized by increased levels of the toxic metabolite homocysteine. Cysteine synthase on the other hand catalyzes the last step of cysteine biosynthesis. This subgroup also includes an O-Phosphoserine sulfhydrylase found in hyperthermophilic archaea which produces L-cysteine from sulfide and the more thermostable O-phospho-L-serine.
Probab=39.90 E-value=1.4e+02 Score=27.91 Aligned_cols=59 Identities=14% Similarity=0.067 Sum_probs=44.4
Q ss_pred CCCCCEEEEECCCCCCcHHHHHHHHHHcCCeeccCCCCCCHHHHHHHHhhcCCeEEEEcCC
Q 011116 29 LCRKTTSLTSSPLPPSTSPVLYFSLLSLGVVISPANPLSSTSEVSHQIQLSKPSIAFATSH 89 (493)
Q Consensus 29 l~~gd~V~l~~~~~~~~~~~~~lA~~~~G~~~v~i~~~~~~~~l~~~l~~~~~~~il~~~~ 89 (493)
+++|++|+. .. .+-.-..+-++|.+.|..++.+-|..........++..++++++++..
T Consensus 50 ~~~~~~vv~-~S-sGN~g~alA~~a~~~G~~~~i~vp~~~~~~k~~~~~~~Ga~v~~~~~~ 108 (291)
T cd01561 50 LKPGTTIIE-PT-SGNTGIGLAMVAAAKGYRFIIVMPETMSEEKRKLLRALGAEVILTPEA 108 (291)
T ss_pred CCCCCEEEE-eC-CChHHHHHHHHHHHcCCeEEEEECCCCCHHHHHHHHHcCCEEEEeCCC
Confidence 346777665 44 577777888888899988777766655566678899999999998864
No 214
>PRK08276 long-chain-fatty-acid--CoA ligase; Validated
Probab=39.72 E-value=1.9e+02 Score=29.24 Aligned_cols=86 Identities=14% Similarity=-0.030 Sum_probs=62.5
Q ss_pred ecchHHHHHHHHHhhhhcccCCCCCCCCCCcEEEEecChhHHHHHHHHHHHHhcCCeEEEe-cCCCHHHHHHHHHhcCee
Q 011116 150 LLSHLNVIAIIAGYYHVTEETDPNEGPPPHPVSFFTLPMFHVFGFFMLVRAASKGETLVFM-ERFDFEKMLKAVENYRVT 228 (493)
Q Consensus 150 ~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pl~~~~g~~~~~~~l~~G~~~~~~-~~~~~~~~~~~l~~~~~t 228 (493)
.+|..++..........+.. .+.++++++....+-... ....++.++..|+..+.. ......++...+++.+++
T Consensus 11 ~~ty~el~~~v~~~a~~L~~----~g~~~~~~V~i~~~~~~~-~~~~~la~~~~G~~~~~l~~~~~~~~~~~~~~~~~~~ 85 (502)
T PRK08276 11 VVTYGELEARSNRLAHGLRA----LGLREGDVVAILLENNPE-FFEVYWAARRSGLYYTPINWHLTAAEIAYIVDDSGAK 85 (502)
T ss_pred EEEHHHHHHHHHHHHHHHHH----hCCCCCCEEEEEeCCCHH-HHHHHHHHHhcCcEEEecccccCHHHHHHHHhcCCCC
Confidence 36777776666665555432 356889999888776643 345688889999988877 456788999999999999
Q ss_pred ecccChHHHHHH
Q 011116 229 YMPVSPPLIVAF 240 (493)
Q Consensus 229 ~l~~~P~~~~~l 240 (493)
.++..+.....+
T Consensus 86 ~ii~~~~~~~~~ 97 (502)
T PRK08276 86 VLIVSAALADTA 97 (502)
T ss_pred EEEEccchhhHH
Confidence 888877655443
No 215
>PRK15407 lipopolysaccharide biosynthesis protein RfbH; Provisional
Probab=39.42 E-value=1.1e+02 Score=30.66 Aligned_cols=56 Identities=13% Similarity=0.074 Sum_probs=37.5
Q ss_pred CCCCCCEEEEECCCCCCcHHHHHHHHHHcCCeeccCCCC-----CCHHHHHHHHhhcCCeEEEEcC
Q 011116 28 SLCRKTTSLTSSPLPPSTSPVLYFSLLSLGVVISPANPL-----SSTSEVSHQIQLSKPSIAFATS 88 (493)
Q Consensus 28 gl~~gd~V~l~~~~~~~~~~~~~lA~~~~G~~~v~i~~~-----~~~~~l~~~l~~~~~~~il~~~ 88 (493)
++++||.|++-.+ .+.....++...|+.+++++.+ ...+.+...+.. +.++|+...
T Consensus 107 ~~~pGd~VIv~~~----t~~a~~~~v~~~G~~pv~vdvd~~~~~id~~~le~~i~~-~tkaVi~~~ 167 (438)
T PRK15407 107 ALKPGDEVITVAA----GFPTTVNPIIQNGLVPVFVDVELPTYNIDASLLEAAVSP-KTKAIMIAH 167 (438)
T ss_pred CCCCCCEEEECCC----CcHHHHHHHHHcCCEEEEEecCCCcCCcCHHHHHHHcCc-CCeEEEEeC
Confidence 8899999876554 4455566777789887766432 356777776643 566666653
No 216
>TIGR03098 ligase_PEP_1 acyl-CoA ligase (AMP-forming), exosortase system type 1 associated. This group of proteins contains an AMP-binding domain (pfam00501) associated with acyl CoA-ligases. These proteins are generally found in genomes containing the exosortase/PEP-CTERM protein expoert system, specifically the type 1 variant of this system described by the Genome Property GenProp0652. When found in this context they are invariably present next to a decarboxylase enzyme. A number of sequences from Burkholderia species also hit this model, but the genomic context is obviously different. The hypothesis of a constant substrate for this family is only strong where the exosortase context is present.
Probab=39.32 E-value=1.6e+02 Score=29.96 Aligned_cols=86 Identities=12% Similarity=0.012 Sum_probs=63.0
Q ss_pred ecchHHHHHHHHHhhhhcccCCCCCCCCCCcEEEEecChhHHHHHHHHHHHHhcCCeEEEe-cCCCHHHHHHHHHhcCee
Q 011116 150 LLSHLNVIAIIAGYYHVTEETDPNEGPPPHPVSFFTLPMFHVFGFFMLVRAASKGETLVFM-ERFDFEKMLKAVENYRVT 228 (493)
Q Consensus 150 ~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pl~~~~g~~~~~~~l~~G~~~~~~-~~~~~~~~~~~l~~~~~t 228 (493)
.+|..++...+..+...+.. .+..+++++...++-... ....++.++..|+..+.. .....+++...+++.+++
T Consensus 25 ~~ty~~l~~~v~~~a~~l~~----~g~~~~~~V~i~~~n~~~-~~~~~lA~~~~G~~~v~l~~~~~~~~~~~~l~~~~~~ 99 (515)
T TIGR03098 25 TLTYAALSERVLALASGLRG----LGLARGERVAIYLDKRLE-TVTAMFGAALAGGVFVPINPLLKAEQVAHILADCNVR 99 (515)
T ss_pred eeeHHHHHHHHHHHHHHHHH----cCCCCCCEEEEEcCCCHH-HHHHHHHHHhcCEEEEeCCCCCCHHHHHHHHHcCCCe
Confidence 57888887766666555532 356788999888876553 345677888899888776 456889999999999999
Q ss_pred ecccChHHHHHH
Q 011116 229 YMPVSPPLIVAF 240 (493)
Q Consensus 229 ~l~~~P~~~~~l 240 (493)
.++..+..+..+
T Consensus 100 ~~i~~~~~~~~~ 111 (515)
T TIGR03098 100 LLVTSSERLDLL 111 (515)
T ss_pred EEEEccchhhhh
Confidence 988876554433
No 217
>PRK05850 acyl-CoA synthetase; Validated
Probab=39.05 E-value=2.9e+02 Score=28.62 Aligned_cols=104 Identities=10% Similarity=0.017 Sum_probs=71.0
Q ss_pred CCCCeEEEEccC-C-CCCCccceecchHHHHHHHHHhhhhcccCCCCCCCCCCcEEEEecChhHHHHHHHHHHHHhcCCe
Q 011116 129 YQSDPAAILYSS-G-TTGKVKGVLLSHLNVIAIIAGYYHVTEETDPNEGPPPHPVSFFTLPMFHVFGFFMLVRAASKGET 206 (493)
Q Consensus 129 ~~~~~~~i~~TS-G-TTG~pK~v~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pl~~~~g~~~~~~~l~~G~~ 206 (493)
.++.++.+.... + ..|. ...+|...+...+..+...+.. .| .++|++...++.+. -....++.++..|+.
T Consensus 14 ~p~~~a~~~~~~~~~~~~~--~~~lty~eL~~~v~~~A~~L~~----~g-~~gd~V~l~~~n~~-~~~~~~lA~~~~G~v 85 (578)
T PRK05850 14 QPDDAAFTFIDYEQDPAGV--AETLTWSQLYRRTLNVAEELRR----HG-STGDRAVILAPQGL-EYIVAFLGALQAGLI 85 (578)
T ss_pred CCCceEEEEEccCCCCCCc--eeeecHHHHHHHHHHHHHHHHH----hC-CCCCEEEEEcCCcc-cHHHHHHHHHHcCce
Confidence 456666654321 1 1222 2457888887777766666543 23 47899988888654 334568888999998
Q ss_pred EEEecC----CCHHHHHHHHHhcCeeecccChHHHHHH
Q 011116 207 LVFMER----FDFEKMLKAVENYRVTYMPVSPPLIVAF 240 (493)
Q Consensus 207 ~~~~~~----~~~~~~~~~l~~~~~t~l~~~P~~~~~l 240 (493)
.+..+. ...+++...++..++..++..+.....+
T Consensus 86 ~vpl~~~~~~~~~~~l~~~l~~~~~~~il~~~~~~~~~ 123 (578)
T PRK05850 86 AVPLSVPQGGAHDERVSAVLRDTSPSVVLTTSAVVDDV 123 (578)
T ss_pred EEecCCCCccchHHHHHHHHHhcCCCEEEEcHHHHHHH
Confidence 887753 3567899999999999999887766554
No 218
>PRK06839 acyl-CoA synthetase; Validated
Probab=38.90 E-value=3.8e+02 Score=26.94 Aligned_cols=88 Identities=7% Similarity=-0.107 Sum_probs=64.7
Q ss_pred eecchHHHHHHHHHhhhhcccCCCCCCCCCCcEEEEecChhHHHHHHHHHHHHhcCCeEEEec-CCCHHHHHHHHHhcCe
Q 011116 149 VLLSHLNVIAIIAGYYHVTEETDPNEGPPPHPVSFFTLPMFHVFGFFMLVRAASKGETLVFME-RFDFEKMLKAVENYRV 227 (493)
Q Consensus 149 v~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pl~~~~g~~~~~~~l~~G~~~~~~~-~~~~~~~~~~l~~~~~ 227 (493)
..+|...+......+...+.. ..|+.+++++...++-... ....++.++..|+..+..+ ..+.+++...+++.++
T Consensus 26 ~~~ty~~l~~~~~~la~~L~~---~~g~~~~~~V~i~~~~~~~-~~~~~la~~~~G~~~~~~~~~~~~~~~~~~l~~~~~ 101 (496)
T PRK06839 26 EEMTYKQLHEYVSKVAAYLIY---ELNVKKGERIAILSQNSLE-YIVLLFAIAKVECIAVPLNIRLTENELIFQLKDSGT 101 (496)
T ss_pred ceEEHHHHHHHHHHHHHHHHH---hcCCCCCCEEEEECCCCHH-HHHHHHHHHhcCcEEEecCcccCHHHHHHHHHhcCc
Confidence 467888887777776665521 1256889999888877643 3456778888999888774 4678899999999999
Q ss_pred eecccChHHHHHH
Q 011116 228 TYMPVSPPLIVAF 240 (493)
Q Consensus 228 t~l~~~P~~~~~l 240 (493)
+.++..+.....+
T Consensus 102 ~~i~~~~~~~~~~ 114 (496)
T PRK06839 102 TVLFVEKTFQNMA 114 (496)
T ss_pred eEEEEcHHHHHHH
Confidence 9998887665443
No 219
>PRK08314 long-chain-fatty-acid--CoA ligase; Validated
Probab=38.70 E-value=1.6e+02 Score=30.21 Aligned_cols=87 Identities=9% Similarity=-0.046 Sum_probs=64.0
Q ss_pred ecchHHHHHHHHHhhhhcccCCCCC-CCCCCcEEEEecChhHHHHHHHHHHHHhcCCeEEEe-cCCCHHHHHHHHHhcCe
Q 011116 150 LLSHLNVIAIIAGYYHVTEETDPNE-GPPPHPVSFFTLPMFHVFGFFMLVRAASKGETLVFM-ERFDFEKMLKAVENYRV 227 (493)
Q Consensus 150 ~~t~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~pl~~~~g~~~~~~~l~~G~~~~~~-~~~~~~~~~~~l~~~~~ 227 (493)
.+|...+...+..+...+.. . ++.+++++...++-.. ..+..++.++..|+..+.. +....+++...++..++
T Consensus 35 ~~Ty~~l~~~v~~~a~~L~~----~~g~~~g~~V~i~~~~~~-~~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~ 109 (546)
T PRK08314 35 AISYRELLEEAERLAGYLQQ----ECGVRKGDRVLLYMQNSP-QFVIAYYAILRANAVVVPVNPMNREEELAHYVTDSGA 109 (546)
T ss_pred eecHHHHHHHHHHHHHHHHH----hhCCCCCCEEEEECCCCh-HHHHHHHHHHHcCcEEeecCcCcCHHHHHHHHHhCCC
Confidence 46778787666665555432 2 4688999998888553 3346788889999988877 45678999999999999
Q ss_pred eecccChHHHHHHH
Q 011116 228 TYMPVSPPLIVAFI 241 (493)
Q Consensus 228 t~l~~~P~~~~~l~ 241 (493)
+.++..+.....+.
T Consensus 110 ~~ii~~~~~~~~~~ 123 (546)
T PRK08314 110 RVAIVGSELAPKVA 123 (546)
T ss_pred eEEEEccchhhhHH
Confidence 99888776655443
No 220
>PLN03051 acyl-activating enzyme; Provisional
Probab=38.42 E-value=1.1e+02 Score=31.06 Aligned_cols=67 Identities=9% Similarity=-0.033 Sum_probs=48.9
Q ss_pred hhCCCCCCCEEEEECCCCCCcHHHHHHHHHHcCCeeccCCCCCCHHHHHHHHhhcCCeEEEEcCCCc
Q 011116 25 KRDSLCRKTTSLTSSPLPPSTSPVLYFSLLSLGVVISPANPLSSTSEVSHQIQLSKPSIAFATSHTS 91 (493)
Q Consensus 25 ~~~gl~~gd~V~l~~~~~~~~~~~~~lA~~~~G~~~v~i~~~~~~~~l~~~l~~~~~~~il~~~~~~ 91 (493)
...+++++|++...+|..+...+..+++++..|+.++........+.+...+++.++.++...+...
T Consensus 153 ~~~~~~~~d~~l~~~pl~h~~g~~~~~~~l~~G~t~v~~~~~~~~~~~~~~i~~~~vt~~~~vP~~~ 219 (499)
T PLN03051 153 AHMDIQPGDVVCWPTNLGWMMGPWLLYSAFLNGATLALYGGAPLGRGFGKFVQDAGVTVLGLVPSIV 219 (499)
T ss_pred HhcCCCCCCEEEEccCcceeeehHHHHHHHHcCCEEEecCCCCCcHHHHHHHHHhCCcEEEeCHHHH
Confidence 3468899999887777222223345677888999988766545678899999999999998876543
No 221
>PF11142 DUF2917: Protein of unknown function (DUF2917); InterPro: IPR021317 This bacterial family of proteins appears to be restricted to Proteobacteria.
Probab=38.24 E-value=1.2e+02 Score=20.73 Aligned_cols=44 Identities=20% Similarity=0.410 Sum_probs=30.9
Q ss_pred cCCceEEEEcCCCCccCCCCCceEEEEeCccccccccCCcccccccccCCCeeeccceEEEcCCCcEEEEc
Q 011116 313 AELMEAKIVDPATGEALPPGQKGELWLRGPTIMKGYVGDDKATSETVHSEGWLKTGDLCYFDSNGFLFIVD 383 (493)
Q Consensus 313 ~~~~~~~i~d~~~~~~~~~g~~Gel~v~~~~~~~gy~~~~~~~~~~~~~~~~~~TgD~~~~~~~g~~~~~G 383 (493)
-.+..+++.. |.+|++-..- ..|-|+..||...+...+.+++.+
T Consensus 15 ~~~~~l~v~~------------G~vWlT~~g~---------------~~D~~L~~G~~l~l~~g~~vvl~a 58 (63)
T PF11142_consen 15 AAGQRLRVES------------GRVWLTREGD---------------PDDYWLQAGDSLRLRRGGRVVLSA 58 (63)
T ss_pred CCCcEEEEcc------------ccEEEECCCC---------------CCCEEECCCCEEEeCCCCEEEEEe
Confidence 3455666665 8999984321 135588999999998888887765
No 222
>TIGR02898 spore_YhcN_YlaJ sporulation lipoprotein, YhcN/YlaJ family. YhcN and YlaJ are predicted lipoproteins that have been detected as spore proteins but not vegetative proteins in Bacillus subtilis. Both appear to be expressed under control of the RNA polymerase sigma-G factor. The YlaJ-like members of this family have a low-complexity, strongly acidic 40-residue C-terminal domain that is not included in the seed alignment for this model. A portion of the low-complexity region between the lipoprotein signal sequence and the main conserved region of the protein family was also excised from the seed alignment.
Probab=37.95 E-value=1.9e+02 Score=24.25 Aligned_cols=62 Identities=18% Similarity=0.104 Sum_probs=36.4
Q ss_pred HHHHHHHhcCCCcceEEEEeeeCCCCCeeEEEEEEeCCCC-CCCHHHHHHHHHhcCCC-CCCcceEEEe
Q 011116 399 VELEHLLHSNPEIADAAVIPYPDEEAGQIPMAFVVRKPGS-NITEAEIMDFIAKQVAP-YKKIRRVAFI 465 (493)
Q Consensus 399 ~~ie~~l~~~~~v~~~~v~~~~~~~~~~~~~~~v~~~~~~-~~~~~~l~~~l~~~l~~-~~~p~~~~~~ 465 (493)
..|.....++|+|.++.++...+. .++.+.+.... .....++++.+.+.+-. ......+.+.
T Consensus 57 ~~Ia~~v~~v~~V~dA~vvVtg~~-----A~Vgv~~~~~~~~~~~~~iK~~Va~~Vk~~dp~~~~VyVs 120 (158)
T TIGR02898 57 DEIASEAAKVKGVKDATVVITGNY-----AYVGVDLTNGLEGSVTDELKEKVAETVKSTDNRIANVYVS 120 (158)
T ss_pred HHHHHHHhcCCCCceEEEEEECCE-----EEEEEEcCCCcchhhHHHHHHHHHHHHHhhCCCcceEEEE
Confidence 467888888999999999975332 33344444332 22235666666655544 4444455443
No 223
>PRK06087 short chain acyl-CoA synthetase; Reviewed
Probab=37.88 E-value=2.1e+02 Score=29.42 Aligned_cols=79 Identities=9% Similarity=0.032 Sum_probs=59.7
Q ss_pred ecchHHHHHHHHHhhhhcccCCCCCCCCCCcEEEEecChhHHHHHHHHHHHHhcCCeEEEe-cCCCHHHHHHHHHhcCee
Q 011116 150 LLSHLNVIAIIAGYYHVTEETDPNEGPPPHPVSFFTLPMFHVFGFFMLVRAASKGETLVFM-ERFDFEKMLKAVENYRVT 228 (493)
Q Consensus 150 ~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pl~~~~g~~~~~~~l~~G~~~~~~-~~~~~~~~~~~l~~~~~t 228 (493)
.+|...+...+..+...+.. .|+++++++...+|... .....++.++..|+..+.. +....+++...++..++.
T Consensus 49 ~~Ty~~l~~~v~~la~~l~~----~G~~~gd~V~i~~~n~~-~~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~ 123 (547)
T PRK06087 49 SYTYSALDHAASRLANWLLA----KGIEPGDRVAFQLPGWC-EFTIIYLACLKVGAVSVPLLPSWREAELVWVLNKCQAK 123 (547)
T ss_pred EEEHHHHHHHHHHHHHHHHH----cCCCCCCEEEEECCCCH-HHHHHHHHHHHcCcEEeccchhcCHHHHHHHHHhcCCe
Confidence 47888887777666666543 36789999998877655 3346788889999988876 456788899999999988
Q ss_pred ecccC
Q 011116 229 YMPVS 233 (493)
Q Consensus 229 ~l~~~ 233 (493)
++++.
T Consensus 124 ~l~~~ 128 (547)
T PRK06087 124 MFFAP 128 (547)
T ss_pred EEEEe
Confidence 87664
No 224
>PRK09088 acyl-CoA synthetase; Validated
Probab=37.82 E-value=2.7e+02 Score=28.03 Aligned_cols=80 Identities=9% Similarity=-0.040 Sum_probs=59.1
Q ss_pred ecchHHHHHHHHHhhhhcccCCCCCCCCCCcEEEEecChhHHHHHHHHHHHHhcCCeEEEe-cCCCHHHHHHHHHhcCee
Q 011116 150 LLSHLNVIAIIAGYYHVTEETDPNEGPPPHPVSFFTLPMFHVFGFFMLVRAASKGETLVFM-ERFDFEKMLKAVENYRVT 228 (493)
Q Consensus 150 ~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pl~~~~g~~~~~~~l~~G~~~~~~-~~~~~~~~~~~l~~~~~t 228 (493)
.+|..++...+..+...+.. .|+.+++++...++-...+ +..++.++..|+..+.. +....+.+...+++.+++
T Consensus 22 ~~ty~~l~~~v~~~a~~l~~----~g~~~~~~v~i~~~~~~~~-~~~~la~~~~G~~~v~~~~~~~~~~~~~~~~~~~~~ 96 (488)
T PRK09088 22 RWTYAELDALVGRLAAVLRR----RGCVDGERLAVLARNSVWL-VALHFACARVGAIYVPLNWRLSASELDALLQDAEPR 96 (488)
T ss_pred EEEHHHHHHHHHHHHHHHHH----cCCCCCCEEEEECCCCHHH-HHHHHHHHHcCeEEEeeCccCCHHHHHHHHHhCCCC
Confidence 47888887766665555432 3567889998888776643 35578888899888877 456789999999999988
Q ss_pred ecccCh
Q 011116 229 YMPVSP 234 (493)
Q Consensus 229 ~l~~~P 234 (493)
.++...
T Consensus 97 ~ii~~~ 102 (488)
T PRK09088 97 LLLGDD 102 (488)
T ss_pred EEEEcc
Confidence 886654
No 225
>PRK13382 acyl-CoA synthetase; Provisional
Probab=37.55 E-value=2.1e+02 Score=29.40 Aligned_cols=83 Identities=10% Similarity=-0.049 Sum_probs=61.8
Q ss_pred ecchHHHHHHHHHhhhhcccCCCCCCCCCCcEEEEecChhHHHHHHHHHHHHhcCCeEEEec-CCCHHHHHHHHHhcCee
Q 011116 150 LLSHLNVIAIIAGYYHVTEETDPNEGPPPHPVSFFTLPMFHVFGFFMLVRAASKGETLVFME-RFDFEKMLKAVENYRVT 228 (493)
Q Consensus 150 ~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pl~~~~g~~~~~~~l~~G~~~~~~~-~~~~~~~~~~l~~~~~t 228 (493)
.+|...+......+...+.. .|..+++++...++-... ....++.++..|+..+..+ ....+++...+++.+++
T Consensus 68 ~~Ty~el~~~~~~~A~~L~~----~g~~~g~~V~i~~~n~~~-~~~~~lA~~~~G~~~vpl~~~~~~~~l~~~l~~~~~~ 142 (537)
T PRK13382 68 TLTWRELDERSDALAAALQA----LPIGEPRVVGIMCRNHRG-FVEALLAANRIGADILLLNTSFAGPALAEVVTREGVD 142 (537)
T ss_pred eecHHHHHHHHHHHHHHHHH----cCCCCCCEEEEEecCcHH-HHHHHHHHHHcCcEEEecCcccCHHHHHHHHHhcCCC
Confidence 47777777666666655532 356889999999886554 3467888899999988774 46788999999999999
Q ss_pred ecccChHHH
Q 011116 229 YMPVSPPLI 237 (493)
Q Consensus 229 ~l~~~P~~~ 237 (493)
.++......
T Consensus 143 ~vi~~~~~~ 151 (537)
T PRK13382 143 TVIYDEEFS 151 (537)
T ss_pred EEEEchhhH
Confidence 887765543
No 226
>PRK06334 long chain fatty acid--[acyl-carrier-protein] ligase; Validated
Probab=37.28 E-value=1.8e+02 Score=29.89 Aligned_cols=82 Identities=13% Similarity=0.090 Sum_probs=62.9
Q ss_pred cchHHHHHHHHHhhhhcccCCCCCCCCCCcEEEEecChhHHHHHHHHHHHHhcCCeEEEec-CCCHHHHHHHHHhcCeee
Q 011116 151 LSHLNVIAIIAGYYHVTEETDPNEGPPPHPVSFFTLPMFHVFGFFMLVRAASKGETLVFME-RFDFEKMLKAVENYRVTY 229 (493)
Q Consensus 151 ~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pl~~~~g~~~~~~~l~~G~~~~~~~-~~~~~~~~~~l~~~~~t~ 229 (493)
+|...+...+..+...+.. .+++++...+|-...+ ...++.++..|+..+..+ ....+++...++..++++
T Consensus 46 ~Ty~el~~~~~~lA~~L~~-------~~gd~Val~~~n~~e~-~~~~lA~~~~G~v~vpl~~~~~~~~l~~~l~~~~~~~ 117 (539)
T PRK06334 46 LSYNQVRKAVIALATKVSK-------YPDQHIGIMMPASAGA-YIAYFATLLSGKIPVMINWSQGLREVTACANLVGVTH 117 (539)
T ss_pred ccHHHHHHHHHHHHHHHhh-------ccCCeEEEEcCCchHH-HHHHHHHHhcCCeeEecCcccchHHHHHHHHHcCCCE
Confidence 7888888888877777643 4789998888865542 356788899999888774 467889999999999999
Q ss_pred cccChHHHHHH
Q 011116 230 MPVSPPLIVAF 240 (493)
Q Consensus 230 l~~~P~~~~~l 240 (493)
+++....+..+
T Consensus 118 ii~~~~~~~~~ 128 (539)
T PRK06334 118 VLTSKQLMQHL 128 (539)
T ss_pred EEehHHHHHHH
Confidence 88876655443
No 227
>TIGR03595 Obg_CgtA_exten Obg family GTPase CgtA, C-terminal extension. CgtA (see model TIGR02729) is a broadly conserved member of the obg family of GTPases associated with ribosome maturation. This model represents a unique C-terminal domain found in some but not all sequences of CgtA. This region is preceded, and may be followed, by a region of low-complexity sequence.
Probab=36.50 E-value=35 Score=23.94 Aligned_cols=19 Identities=16% Similarity=0.143 Sum_probs=14.7
Q ss_pred HHHHHHhhCCCCCCCEEEEE
Q 011116 19 LSHALSKRDSLCRKTTSLTS 38 (493)
Q Consensus 19 lA~~L~~~~gl~~gd~V~l~ 38 (493)
+=..| .+.|++.||+|.+.
T Consensus 45 v~~~L-~~~G~~~GD~V~Ig 63 (69)
T TIGR03595 45 VEDAL-RKAGAKDGDTVRIG 63 (69)
T ss_pred HHHHH-HHcCCCCCCEEEEc
Confidence 34556 67899999999875
No 228
>TIGR03443 alpha_am_amid L-aminoadipate-semialdehyde dehydrogenase. Members of this protein family are L-aminoadipate-semialdehyde dehydrogenase (EC 1.2.1.31), product of the LYS2 gene. It is also called alpha-aminoadipate reductase. In fungi, lysine is synthesized via aminoadipate. Currently, all members of this family are fungal.
Probab=36.33 E-value=2e+02 Score=33.83 Aligned_cols=100 Identities=8% Similarity=-0.063 Sum_probs=67.2
Q ss_pred CCCCeEEEEccCCCCCCccceecchHHHHHHHHHhhhhcccCCCCCCCCCCcEEEEecChhHHHHHHHHHHHHhcCCeEE
Q 011116 129 YQSDPAAILYSSGTTGKVKGVLLSHLNVIAIIAGYYHVTEETDPNEGPPPHPVSFFTLPMFHVFGFFMLVRAASKGETLV 208 (493)
Q Consensus 129 ~~~~~~~i~~TSGTTG~pK~v~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pl~~~~g~~~~~~~l~~G~~~~ 208 (493)
.++.++++...+...+......+|...+...+..+...+.. .|..+++++...++-...+ ...+++++..|+..+
T Consensus 249 ~pd~~A~~~~~~~~~~~~~~~~lTY~eL~~~~~~lA~~L~~----~gv~~g~~V~i~~~~~~~~-i~~~lA~l~~G~~~v 323 (1389)
T TIGR03443 249 HPDRTCVVETPSFLDPSSKTRSFTYKQINEASNILAHYLLK----TGIKRGDVVMIYAYRGVDL-VVAVMGVLKAGATFS 323 (1389)
T ss_pred CCCCeEEEeccccccccCCCceeeHHHHHHHHHHHHHHHHH----hCCCCCCEEEEEecCCHHH-HHHHHHHHhhCcEEe
Confidence 45666666433211111113457888887777766665532 3668999999888876433 467888999999988
Q ss_pred Eec-CCCHHHHHHHHHhcCeeecccC
Q 011116 209 FME-RFDFEKMLKAVENYRVTYMPVS 233 (493)
Q Consensus 209 ~~~-~~~~~~~~~~l~~~~~t~l~~~ 233 (493)
..+ ....+++...++..++..++..
T Consensus 324 pldp~~p~~~~~~~l~~~~~~~li~~ 349 (1389)
T TIGR03443 324 VIDPAYPPARQTIYLSVAKPRALIVI 349 (1389)
T ss_pred ccCCCCcHHHHHHHHHhcCCCEEEEe
Confidence 775 4567888888888888776654
No 229
>PRK07638 acyl-CoA synthetase; Validated
Probab=36.21 E-value=80 Score=31.92 Aligned_cols=67 Identities=13% Similarity=0.062 Sum_probs=50.3
Q ss_pred hhCCCCCCCEEEEECCCCCCcHHHHHHHHHHcCCeeccCCCCCCHHHHHHHHhhcCCeEEEEcCCCcc
Q 011116 25 KRDSLCRKTTSLTSSPLPPSTSPVLYFSLLSLGVVISPANPLSSTSEVSHQIQLSKPSIAFATSHTSY 92 (493)
Q Consensus 25 ~~~gl~~gd~V~l~~~~~~~~~~~~~lA~~~~G~~~v~i~~~~~~~~l~~~l~~~~~~~il~~~~~~~ 92 (493)
...+++++|++....+..+..++...+..+..|+..+.. +..+++.+...+++.++.++...+....
T Consensus 177 ~~~~~~~~d~~~~~~~l~~~~~l~~~~~~l~~g~~~~~~-~~~~~~~~~~~i~~~~~t~~~~~P~~~~ 243 (487)
T PRK07638 177 HDFHMKREDSVLIAGTLVHSLFLYGAISTLYVGQTVHLM-RKFIPNQVLDKLETENISVMYTVPTMLE 243 (487)
T ss_pred HhcCcCCCCEEEEeecchHHHHHHHHHHHHccCcEEEEc-CCCCHHHHHHHHHHcCCeEEEeCcHHHH
Confidence 456899999998877722333455666777889888755 5678899999999999999998875443
No 230
>PRK12583 acyl-CoA synthetase; Provisional
Probab=35.94 E-value=1.4e+02 Score=30.81 Aligned_cols=69 Identities=6% Similarity=0.036 Sum_probs=50.9
Q ss_pred HHHHHhhCCCCCCCEEEEECCCC--CCcHHHHHHHHHHcCCeeccCCCCCCHHHHHHHHhhcCCeEEEEcCC
Q 011116 20 SHALSKRDSLCRKTTSLTSSPLP--PSTSPVLYFSLLSLGVVISPANPLSSTSEVSHQIQLSKPSIAFATSH 89 (493)
Q Consensus 20 A~~L~~~~gl~~gd~V~l~~~~~--~~~~~~~~lA~~~~G~~~v~i~~~~~~~~l~~~l~~~~~~~il~~~~ 89 (493)
+..+....+++++|++...++ - ....+..+++++..|+.++..........+...+++.++..++..+.
T Consensus 230 ~~~~~~~~~~~~~d~~~~~~p-~~~~~g~~~~~~~~l~~g~~v~~~~~~~~~~~~~~~i~~~~~t~l~~~P~ 300 (558)
T PRK12583 230 GYFVAESLGLTEHDRLCVPVP-LYHCFGMVLANLGCMTVGACLVYPNEAFDPLATLQAVEEERCTALYGVPT 300 (558)
T ss_pred HHHHHHHhCCCCCCeEEEecC-chhhhhHHHHHHHHHhcCceEEeecCCCCHHHHHHHHHHcCCeEEeccHH
Confidence 344434568999999988776 3 24455667888888988875455667888889999999998887664
No 231
>PF09269 DUF1967: Domain of unknown function (DUF1967); InterPro: IPR015349 The Obg family comprises a group of ancient P-loop small G proteins (GTPases) belonging to the TRAFAC (for translation factors) class and can be subdivided into several distinct protein subfamilies []. OBG GTPases have been found in both prokaryotes and eukaryotes []. The structure of the OBG GTPase from Thermus thermophilus has been determined []. This entry represents a C-terminal domain found in certain OBG GTPases. This domain contains a four-stranded beta sheet and three alpha helices flanked by an additional beta strand. It is predominantly found in the bacterial GTP-binding protein Obg, and is functionally uncharacterised. ; GO: 0000166 nucleotide binding; PDB: 1UDX_A.
Probab=35.82 E-value=37 Score=23.81 Aligned_cols=19 Identities=16% Similarity=0.158 Sum_probs=11.5
Q ss_pred HHHHHHhhCCCCCCCEEEEE
Q 011116 19 LSHALSKRDSLCRKTTSLTS 38 (493)
Q Consensus 19 lA~~L~~~~gl~~gd~V~l~ 38 (493)
+=..| .+.|++.||+|.+.
T Consensus 45 v~~~L-~~~G~~~GD~V~Ig 63 (69)
T PF09269_consen 45 VEKAL-RKAGAKEGDTVRIG 63 (69)
T ss_dssp HHHHH-HTTT--TT-EEEET
T ss_pred HHHHH-HHcCCCCCCEEEEc
Confidence 34556 67899999999863
No 232
>PF00403 HMA: Heavy-metal-associated domain; InterPro: IPR006121 Proteins that transport heavy metals in micro-organisms and mammals share similarities in their sequences and structures. These proteins provide an important focus for research, some being involved in bacterial resistance to toxic metals, such as lead and cadmium, while others are involved in inherited human syndromes, such as Wilson's and Menke's diseases []. A conserved domain has been found in a number of these heavy metal transport or detoxification proteins []. The domain, which has been termed Heavy-Metal-Associated (HMA), contains two conserved cysteines that are probably involved in metal binding. Structure solution of the fourth HMA domain of the Menke's copper transporting ATPase shows a well-defined structure comprising a four-stranded antiparallel beta-sheet and two alpha helices packed in an alpha-beta sandwich fold []. This fold is common to other domains and is classified as "ferredoxin-like".; GO: 0046872 metal ion binding, 0030001 metal ion transport; PDB: 2VOY_A 1P6T_A 1KQK_A 2RML_A 1JWW_A 3K7R_F 1FES_A 1CC8_A 1FD8_A 2GGP_A ....
Probab=35.70 E-value=1.3e+02 Score=20.01 Aligned_cols=46 Identities=20% Similarity=0.219 Sum_probs=29.9
Q ss_pred hHHHHHHHhcCCCcceEEEEeeeCCCCCeeEEEEEEeCCCCCCCHHHHHHHHHh
Q 011116 398 PVELEHLLHSNPEIADAAVIPYPDEEAGQIPMAFVVRKPGSNITEAEIMDFIAK 451 (493)
Q Consensus 398 ~~~ie~~l~~~~~v~~~~v~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~l~~ 451 (493)
...|+.+|.++|+|.++.+-.. .+ .+.+...+.. .+.+++.+.+++
T Consensus 13 ~~~v~~~l~~~~GV~~v~vd~~----~~---~v~v~~~~~~-~~~~~i~~~i~~ 58 (62)
T PF00403_consen 13 AKKVEKALSKLPGVKSVKVDLE----TK---TVTVTYDPDK-TSIEKIIEAIEK 58 (62)
T ss_dssp HHHHHHHHHTSTTEEEEEEETT----TT---EEEEEESTTT-SCHHHHHHHHHH
T ss_pred HHHHHHHHhcCCCCcEEEEECC----CC---EEEEEEecCC-CCHHHHHHHHHH
Confidence 3579999999999976555321 12 2344444332 677888888876
No 233
>PF03808 Glyco_tran_WecB: Glycosyl transferase WecB/TagA/CpsF family; InterPro: IPR004629 The WecG member of this superfamily, believed to be UDP-N-acetyl-D-mannosaminuronic acid transferase, plays a role in Enterobacterial common antigen (eca) synthesis in Escherichia coli. Another family member, the Bacillus subtilis TagA protein, is involved in the biosynthesis of the cell wall polymer poly(glycerol phosphate). The third family member, CpsF, CMP-N-acetylneuraminic acid synthetase has a role in the capsular polysaccharide biosynthesis pathway.; GO: 0009058 biosynthetic process
Probab=35.66 E-value=73 Score=27.09 Aligned_cols=77 Identities=9% Similarity=0.137 Sum_probs=48.6
Q ss_pred hcCCeEEEecCCCHHHHHHHHHhcCeeecccChHHHHHHHhcccCCCCCCCCeeEEEecCCCCC-HHHHHHHHHhCCCCc
Q 011116 202 SKGETLVFMERFDFEKMLKAVENYRVTYMPVSPPLIVAFINSKLTDKYDLSSLQLLGCGGAPLG-KEVTLKFKEKFPNVE 280 (493)
Q Consensus 202 ~~G~~~~~~~~~~~~~~~~~l~~~~~t~l~~~P~~~~~l~~~~~~~~~~l~~lr~v~~~Ge~~~-~~~~~~~~~~~~~~~ 280 (493)
+..+.++++++.....+.+.+ ..++..-+.-+.++..+++.....+ .+..++||.+-. .+..+.+++.+|+..
T Consensus 3 ~~~adlv~~DG~~i~~~~~~~-g~~~~~rv~g~dl~~~l~~~~~~~~-----~~ifllG~~~~~~~~~~~~l~~~yP~l~ 76 (172)
T PF03808_consen 3 LNSADLVLPDGMPIVWAARLL-GRPLPERVTGSDLFPDLLRRAEQRG-----KRIFLLGGSEEVLEKAAANLRRRYPGLR 76 (172)
T ss_pred HHhCCEEecCCHHHHHHHHHc-CCCCCcccCHHHHHHHHHHHHHHcC-----CeEEEEeCCHHHHHHHHHHHHHHCCCeE
Confidence 345667777765556666666 4555444555667777777654332 467777776533 566678888888887
Q ss_pred eecc
Q 011116 281 IRQG 284 (493)
Q Consensus 281 v~~~ 284 (493)
+.-.
T Consensus 77 ivg~ 80 (172)
T PF03808_consen 77 IVGY 80 (172)
T ss_pred EEEe
Confidence 6643
No 234
>PRK06702 O-acetylhomoserine aminocarboxypropyltransferase; Validated
Probab=35.50 E-value=1.2e+02 Score=30.32 Aligned_cols=69 Identities=20% Similarity=0.135 Sum_probs=42.0
Q ss_pred chhhhHHHHHHhhCCCCCCCEEEEECCCCCCcHHHH--HHHHHHcCCeeccCCCCCCHHHHHHHHhhcCCeEEEEc
Q 011116 14 SARFTLSHALSKRDSLCRKTTSLTSSPLPPSTSPVL--YFSLLSLGVVISPANPLSSTSEVSHQIQLSKPSIAFAT 87 (493)
Q Consensus 14 ~~~~~lA~~L~~~~gl~~gd~V~l~~~~~~~~~~~~--~lA~~~~G~~~v~i~~~~~~~~l~~~l~~~~~~~il~~ 87 (493)
+..-++...| ..+ +++||+|++-.+ .+..... -..+.+.|+.+..++...+.+.+...++. +.++|+..
T Consensus 84 SG~aAi~~al-~al-l~~GD~VI~~~~--~Y~~T~~~~~~~l~~~Gi~v~~vd~~~d~~~l~~~I~~-~Tk~I~~e 154 (432)
T PRK06702 84 SGQAAIMLAV-LNI-CSSGDHLLCSST--VYGGTFNLFGVSLRKLGIDVTFFNPNLTADEIVALAND-KTKLVYAE 154 (432)
T ss_pred CHHHHHHHHH-HHh-cCCCCEEEECCC--chHHHHHHHHHHHHHCCCEEEEECCCCCHHHHHHhCCc-CCeEEEEE
Confidence 3344344444 322 688998776444 3332222 22356788888888876677888887764 56777764
No 235
>PRK10524 prpE propionyl-CoA synthetase; Provisional
Probab=35.25 E-value=1.6e+02 Score=31.07 Aligned_cols=98 Identities=11% Similarity=0.105 Sum_probs=68.7
Q ss_pred CCCCeEEEEccCCCCCCccceecchHHHHHHHHHhhhhcccCCCCCCCCCCcEEEEecChhHHHHHHHHHHHHhcCCeEE
Q 011116 129 YQSDPAAILYSSGTTGKVKGVLLSHLNVIAIIAGYYHVTEETDPNEGPPPHPVSFFTLPMFHVFGFFMLVRAASKGETLV 208 (493)
Q Consensus 129 ~~~~~~~i~~TSGTTG~pK~v~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pl~~~~g~~~~~~~l~~G~~~~ 208 (493)
.++.++.+.. +..+|. .-.+|...+...+..+...+.. .|.+++|++...+|..-. ....++.++..|+..+
T Consensus 66 ~p~~~A~~~~-~~~~~~--~~~~Ty~eL~~~v~~lA~~L~~----~Gv~~gd~V~i~~~n~~e-~~~~~lA~~~~Gav~v 137 (629)
T PRK10524 66 RPEQLALIAV-STETDE--ERTYTFRQLHDEVNRMAAMLRS----LGVQRGDRVLIYMPMIAE-AAFAMLACARIGAIHS 137 (629)
T ss_pred CCCCeEEEEE-cCCCCc--eEEEeHHHHHHHHHHHHHHHHH----cCCCCCCEEEEECCCCHH-HHHHHHHHHHhCcEEE
Confidence 4566666543 222222 2357888887777666665532 367899999999887543 2356788889999887
Q ss_pred Ee-cCCCHHHHHHHHHhcCeeecccCh
Q 011116 209 FM-ERFDFEKMLKAVENYRVTYMPVSP 234 (493)
Q Consensus 209 ~~-~~~~~~~~~~~l~~~~~t~l~~~P 234 (493)
.. +.+..+.+...++..++.++++..
T Consensus 138 ~~~~~~~~~~l~~~l~~~~~~~li~~~ 164 (629)
T PRK10524 138 VVFGGFASHSLAARIDDAKPVLIVSAD 164 (629)
T ss_pred eeCCCCCHHHHHHHHHhcCCcEEEEcc
Confidence 76 567889999999999999887654
No 236
>PLN02479 acetate-CoA ligase
Probab=34.20 E-value=2.5e+02 Score=29.04 Aligned_cols=83 Identities=7% Similarity=0.008 Sum_probs=62.3
Q ss_pred ecchHHHHHHHHHhhhhcccCCCCCCCCCCcEEEEecChhHHHHHHHHHHHHhcCCeEEEe-cCCCHHHHHHHHHhcCee
Q 011116 150 LLSHLNVIAIIAGYYHVTEETDPNEGPPPHPVSFFTLPMFHVFGFFMLVRAASKGETLVFM-ERFDFEKMLKAVENYRVT 228 (493)
Q Consensus 150 ~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pl~~~~g~~~~~~~l~~G~~~~~~-~~~~~~~~~~~l~~~~~t 228 (493)
.+|...+...+..+...+.. .|+.++|++....+-.- ......+.++..|+..+.. .....+++...+++.++.
T Consensus 45 ~~ty~eL~~~~~~lA~~L~~----~g~~~gd~V~i~~~n~~-~~~~~~la~~~~G~v~v~l~~~~~~~~l~~~l~~~~~~ 119 (567)
T PLN02479 45 RYTWAQTYQRCRRLASALAK----RSIGPGSTVAVIAPNIP-AMYEAHFGVPMAGAVVNCVNIRLNAPTIAFLLEHSKSE 119 (567)
T ss_pred eeeHHHHHHHHHHHHHHHHH----cCCCCCCEEEEECCCcH-HHHHHHHHHHhCCcEEEEeccccCHHHHHHHHhhcCce
Confidence 46778887766666555532 36789999998888644 2335677888899888877 456789999999999999
Q ss_pred ecccChHHH
Q 011116 229 YMPVSPPLI 237 (493)
Q Consensus 229 ~l~~~P~~~ 237 (493)
.+++.+..+
T Consensus 120 ~ii~~~~~~ 128 (567)
T PLN02479 120 VVMVDQEFF 128 (567)
T ss_pred EEEEchhhh
Confidence 998877654
No 237
>COG1064 AdhP Zn-dependent alcohol dehydrogenases [General function prediction only]
Probab=34.08 E-value=79 Score=30.25 Aligned_cols=62 Identities=10% Similarity=0.013 Sum_probs=46.6
Q ss_pred HHHHhhCCCCCCCEEEEECCCCCCcHHHHHHHHHHcCCeeccCCCCCCHHHHHHHHhhcCCeEEEEcC
Q 011116 21 HALSKRDSLCRKTTSLTSSPLPPSTSPVLYFSLLSLGVVISPANPLSSTSEVSHQIQLSKPSIAFATS 88 (493)
Q Consensus 21 ~~L~~~~gl~~gd~V~l~~~~~~~~~~~~~lA~~~~G~~~v~i~~~~~~~~l~~~l~~~~~~~il~~~ 88 (493)
+.| ++.+++||++|++..- -+.-.+.+++|-. .|+.++.++.+. +-....++.+++.++...
T Consensus 157 ~al-k~~~~~pG~~V~I~G~-GGlGh~avQ~Aka-~ga~Via~~~~~---~K~e~a~~lGAd~~i~~~ 218 (339)
T COG1064 157 RAL-KKANVKPGKWVAVVGA-GGLGHMAVQYAKA-MGAEVIAITRSE---EKLELAKKLGADHVINSS 218 (339)
T ss_pred eeh-hhcCCCCCCEEEEECC-cHHHHHHHHHHHH-cCCeEEEEeCCh---HHHHHHHHhCCcEEEEcC
Confidence 567 6689999999999999 6777777777764 458888876443 445567778888888764
No 238
>COG0365 Acs Acyl-coenzyme A synthetases/AMP-(fatty) acid ligases [Lipid metabolism]
Probab=33.86 E-value=2.3e+02 Score=29.13 Aligned_cols=99 Identities=11% Similarity=0.045 Sum_probs=69.4
Q ss_pred CeEEEEccCCCCCCccceecchHHHHHHHHHhhhhcccCCCCCCCCCCcEEEEecChhHHHHHHHHHHHHhcCCeEEEe-
Q 011116 132 DPAAILYSSGTTGKVKGVLLSHLNVIAIIAGYYHVTEETDPNEGPPPHPVSFFTLPMFHVFGFFMLVRAASKGETLVFM- 210 (493)
Q Consensus 132 ~~~~i~~TSGTTG~pK~v~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pl~~~~g~~~~~~~l~~G~~~~~~- 210 (493)
+...++|-+-.++. -.+|.+.+......+...+.. ..+. ++|++...+|...-. ...++.+...|+.....
T Consensus 25 ~~~aii~~~e~~~~---~~~Ty~~L~~~v~r~A~~L~~---~~gv-kGDrV~iymp~~pe~-~~a~LA~~riGAI~~~vf 96 (528)
T COG0365 25 DDTAIIFDGEDGLF---RELTYGDLRREVARLANALKD---LGGV-KGDRVAIYMPNSPEA-VIALLATARIGAIPAVVS 96 (528)
T ss_pred CceEEEEEcCCCCc---eEEEHHHHHHHHHHHHHHHHH---hCCC-CCCEEEEEcCCCHHH-HHHHHHHHHcCCEEeecc
Confidence 34455555444443 567888887777776666631 1245 999999999987643 35677888888876655
Q ss_pred cCCCHHHHHHHHHhcCeeecccChHHHH
Q 011116 211 ERFDFEKMLKAVENYRVTYMPVSPPLIV 238 (493)
Q Consensus 211 ~~~~~~~~~~~l~~~~~t~l~~~P~~~~ 238 (493)
+.+.++.+..-++..++.++++....++
T Consensus 97 ~~f~~~al~~Ri~d~~~k~vit~d~~~~ 124 (528)
T COG0365 97 PGLSAEAVADRIADLGPKVLIADDGTFR 124 (528)
T ss_pred cCCCHHHHHHHHHccCCCEEEEeccccc
Confidence 6788999999999988888876655543
No 239
>PRK06188 acyl-CoA synthetase; Validated
Probab=33.74 E-value=1.6e+02 Score=30.01 Aligned_cols=68 Identities=12% Similarity=0.081 Sum_probs=52.1
Q ss_pred HHHHhhCCCCCCCEEEEECCCCCCcHHHHHHHHHHcCCeeccCCCCCCHHHHHHHHhhcCCeEEEEcCCC
Q 011116 21 HALSKRDSLCRKTTSLTSSPLPPSTSPVLYFSLLSLGVVISPANPLSSTSEVSHQIQLSKPSIAFATSHT 90 (493)
Q Consensus 21 ~~L~~~~gl~~gd~V~l~~~~~~~~~~~~~lA~~~~G~~~v~i~~~~~~~~l~~~l~~~~~~~il~~~~~ 90 (493)
..+....+++.+|++...++ -...+...+++.+..|+..+..+ ...++.+...+++.++.++...+..
T Consensus 198 ~~~~~~~~~~~~~~~l~~~p-l~~~~g~~~~~~l~~G~~~~~~~-~~~~~~~~~~i~~~~~t~~~~~P~~ 265 (524)
T PRK06188 198 QIQLAEWEWPADPRFLMCTP-LSHAGGAFFLPTLLRGGTVIVLA-KFDPAEVLRAIEEQRITATFLVPTM 265 (524)
T ss_pred HHHHhhcCCCcCcEEEEecC-chhhhhHHHHHHHHcCCEEEEcC-CCCHHHHHHHHHHhCCEEEEehHHH
Confidence 33335578999999999998 55555556677778898877665 5678889999999999998887643
No 240
>PF01037 AsnC_trans_reg: AsnC family; InterPro: IPR019887 The many bacterial transcription regulation proteins which bind DNA through a 'helix-turn-helix' motif can be classified into subfamilies on the basis of sequence similarities. One such family is the AsnC/Lrp subfamily []. The Lrp family of transcriptional regulators appears to be widely distributed among bacteria and archaea, as an important regulatory system of the amino acid metabolism and related processes []. Members of the Lrp family are small DNA-binding proteins with molecular masses of around 15 kDa. Target promoters often contain a number of binding sites that typically lack obvious inverted repeat elements, and to which binding is usually co-operative. LrpA from Pyrococcus furiosus is the first Lrp-like protein to date of which a three-dimensional structure has been solved. In the crystal structure LrpA forms an octamer consisting of four dimers. The structure revealed that the N-terminal part of the protein consists of a helix-turn-helix (HTH) domain, a fold generally involved in DNA binding. The C terminus of Lrp-like proteins has a beta-fold, where the two alpha-helices are located at one side of the four-stranded antiparallel beta-sheet. LrpA forms a homodimer mainly through interactions between the beta-strands of this C-terminal domain, and an octamer through further interactions between the second alpha-helix and fourth beta-strand of the motif. Hence, the C-terminal domain of Lrp-like proteins appears to be involved in ligand-response and activation [].; GO: 0003700 sequence-specific DNA binding transcription factor activity, 0043565 sequence-specific DNA binding, 0006355 regulation of transcription, DNA-dependent, 0005622 intracellular; PDB: 2DJW_F 2GQQ_A 2ZNY_E 2ZNZ_G 1RI7_A 2CYY_A 2E1C_A 2CG4_B 2DBB_B 1I1G_A ....
Probab=33.67 E-value=1.6e+02 Score=20.28 Aligned_cols=51 Identities=16% Similarity=0.152 Sum_probs=33.0
Q ss_pred eChHHHHHHHhcCCCcceEEEEeeeCCCCCeeEEEEEEeCCCCCCCHHHHHHHHHhcCCCC
Q 011116 396 VPPVELEHLLHSNPEIADAAVIPYPDEEAGQIPMAFVVRKPGSNITEAEIMDFIAKQVAPY 456 (493)
Q Consensus 396 i~~~~ie~~l~~~~~v~~~~v~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~l~~~l~~~ 456 (493)
-...++.+.|.++|+|.+|+.+....+ ..+.+.. .+.+++.+.+.+++...
T Consensus 10 ~~~~~~~~~l~~~p~V~~~~~vtG~~d-----~~~~v~~-----~d~~~l~~~i~~~l~~~ 60 (74)
T PF01037_consen 10 DAYDEFAEALAEIPEVVECYSVTGEYD-----LILKVRA-----RDMEELEEFIREKLRSI 60 (74)
T ss_dssp THHHHHHHHHHTSTTEEEEEEESSSSS-----EEEEEEE-----SSHHHHHHHHHHTHHTS
T ss_pred chHHHHHHHHHcCCCEEEEEEEeCCCC-----EEEEEEE-----CCHHHHHHHHHHHhhcC
Confidence 345788999999999999999853222 3344433 34566776665544333
No 241
>PRK08960 hypothetical protein; Provisional
Probab=33.50 E-value=4e+02 Score=25.93 Aligned_cols=59 Identities=12% Similarity=0.113 Sum_probs=28.2
Q ss_pred CCCCCEEEEECCCCCCcHHHHHHHHHHcCCeeccCCCC----CCHHHHHHHHhhcCCeEEEEcCC
Q 011116 29 LCRKTTSLTSSPLPPSTSPVLYFSLLSLGVVISPANPL----SSTSEVSHQIQLSKPSIAFATSH 89 (493)
Q Consensus 29 l~~gd~V~l~~~~~~~~~~~~~lA~~~~G~~~v~i~~~----~~~~~l~~~l~~~~~~~il~~~~ 89 (493)
+++||.|++--| +.......+.......+.++++.. ...+.+...+..-...++++.+.
T Consensus 113 ~~~gd~vlv~~p--~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~~~~~~~~i~i~~p~ 175 (387)
T PRK08960 113 VDPGKHWLLADP--GYPCNRHFLRLVEGAAQLVPVGPDSRYQLTPALVERHWNADTVGALVASPA 175 (387)
T ss_pred cCCCCEEEEcCC--CCcchHHHHHhcCCeEEEEecCcccCCCCCHHHHHHHhCccceEEEEECCC
Confidence 467787777655 333222222222223334454332 34566666555433344555553
No 242
>cd06448 L-Ser-dehyd Serine dehydratase is a pyridoxal phosphate (PLP)-dependent enzyme which catalyzes the conversion of L- , D-serine, or L-threonine to pyruvate/ketobutyrate and ammonia.
Probab=33.06 E-value=89 Score=29.69 Aligned_cols=60 Identities=15% Similarity=0.129 Sum_probs=45.5
Q ss_pred CCCCCCEEEEECCCCCCcHHHHHHHHHHcCCeeccCCCCCCHHHHHHHHhhcCCeEEEEcCC
Q 011116 28 SLCRKTTSLTSSPLPPSTSPVLYFSLLSLGVVISPANPLSSTSEVSHQIQLSKPSIAFATSH 89 (493)
Q Consensus 28 gl~~gd~V~l~~~~~~~~~~~~~lA~~~~G~~~v~i~~~~~~~~l~~~l~~~~~~~il~~~~ 89 (493)
|.+++++|..... +-.-..+-++|...|..++.+-|...+......++..+++++++...
T Consensus 47 g~~~~~~vv~aSs--GN~g~alA~~a~~~G~~~~iv~p~~~~~~k~~~l~~~GA~v~~~~~~ 106 (316)
T cd06448 47 GLNECVHVVCSSG--GNAGLAAAYAARKLGVPCTIVVPESTKPRVVEKLRDEGATVVVHGKV 106 (316)
T ss_pred hcccCCeEEEeCC--cHHHHHHHHHHHHcCCCEEEEECCCCCHHHHHHHHHcCCEEEEECCc
Confidence 3345667666554 66667777888899988887777777777899999999999998753
No 243
>COG5012 Predicted cobalamin binding protein [General function prediction only]
Probab=33.02 E-value=3.6e+02 Score=24.07 Aligned_cols=83 Identities=13% Similarity=0.198 Sum_probs=50.5
Q ss_pred hhHHHHH-HHHHHHHhcCCeEEEe-cCCCHHHHHHHHHhcCeeecccChHHH------HHHHhcccCCCCCCCCeeEEEe
Q 011116 188 MFHVFGF-FMLVRAASKGETLVFM-ERFDFEKMLKAVENYRVTYMPVSPPLI------VAFINSKLTDKYDLSSLQLLGC 259 (493)
Q Consensus 188 l~~~~g~-~~~~~~l~~G~~~~~~-~~~~~~~~~~~l~~~~~t~l~~~P~~~------~~l~~~~~~~~~~l~~lr~v~~ 259 (493)
--|..|- ...-.--..|-.++-. ....++++....++++++.+.++-.+- +.+.+..++.+. +.--.+..
T Consensus 115 DvHdIGk~iV~~ml~~aGfevidLG~dvP~e~fve~a~e~k~d~v~~SalMTttm~~~~~viE~L~eeGi--Rd~v~v~v 192 (227)
T COG5012 115 DVHDIGKNIVATMLEAAGFEVIDLGRDVPVEEFVEKAKELKPDLVSMSALMTTTMIGMKDVIELLKEEGI--RDKVIVMV 192 (227)
T ss_pred cHHHHHHHHHHHHHHhCCcEEEecCCCCCHHHHHHHHHHcCCcEEechHHHHHHHHHHHHHHHHHHHcCC--ccCeEEee
Confidence 4566665 2222223346666655 557899999999999999987765443 333333333332 32334666
Q ss_pred cCCCCCHHHHHHH
Q 011116 260 GGAPLGKEVTLKF 272 (493)
Q Consensus 260 ~Ge~~~~~~~~~~ 272 (493)
||.+++.++...+
T Consensus 193 GGApvtq~~a~~i 205 (227)
T COG5012 193 GGAPVTQDWADKI 205 (227)
T ss_pred cCccccHHHHHHh
Confidence 8999988776553
No 244
>cd01449 TST_Repeat_2 Thiosulfate sulfurtransferase (TST), C-terminal, catalytic domain. TST contains 2 copies of the Rhodanese Homology Domain; this is the second repeat. Only the second repeat contains the catalytically active Cys residue.
Probab=32.99 E-value=64 Score=25.04 Aligned_cols=39 Identities=18% Similarity=0.134 Sum_probs=31.4
Q ss_pred HHHHHHhhCCCCCCCEEEEECCCCCCcHHHHHHHHHHcCCe
Q 011116 19 LSHALSKRDSLCRKTTSLTSSPLPPSTSPVLYFSLLSLGVV 59 (493)
Q Consensus 19 lA~~L~~~~gl~~gd~V~l~~~~~~~~~~~~~lA~~~~G~~ 59 (493)
+...+ ...|+.+++.|++++. .+.....+...+..+|..
T Consensus 66 ~~~~~-~~~~~~~~~~iv~yc~-~g~~s~~~~~~l~~~G~~ 104 (118)
T cd01449 66 LRALF-AALGITPDKPVIVYCG-SGVTACVLLLALELLGYK 104 (118)
T ss_pred HHHHH-HHcCCCCCCCEEEECC-cHHHHHHHHHHHHHcCCC
Confidence 34556 6778999999999999 888888888888888863
No 245
>TIGR03208 cyc_hxne_CoA_lg cyclohexanecarboxylate-CoA ligase. Members of this protein family are cyclohexanecarboxylate-CoA ligase. This enzyme prepares the aliphatic ring compound, cyclohexanecarboxylate, for dehydrogenation and then degradation by a pathway also used in benzoyl-CoA degradation in Rhodopseudomonas palustris.
Probab=32.99 E-value=3.3e+02 Score=27.86 Aligned_cols=81 Identities=14% Similarity=-0.011 Sum_probs=59.0
Q ss_pred eecchHHHHHHHHHhhhhcccCCCCCCCCCCcEEEEecChhHHHHHHHHHHHHhcCCeEEEe-cCCCHHHHHHHHHhcCe
Q 011116 149 VLLSHLNVIAIIAGYYHVTEETDPNEGPPPHPVSFFTLPMFHVFGFFMLVRAASKGETLVFM-ERFDFEKMLKAVENYRV 227 (493)
Q Consensus 149 v~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pl~~~~g~~~~~~~l~~G~~~~~~-~~~~~~~~~~~l~~~~~ 227 (493)
..+|..++......+...+.. .|+.+++++...++-... .....+.++..|+..+.. +....+++...++..++
T Consensus 52 ~~~Ty~eL~~~~~~~a~~L~~----~g~~~g~~V~i~~~~~~~-~~~~~la~~~~G~~~v~l~~~~~~~~l~~~l~~~~~ 126 (538)
T TIGR03208 52 RRFSYRELDCRVDRIAVGLAR----LGVGRGDVVSFQLPNRWE-FTALYLACARIGAVLNPLMPIFRERELSFMLNHADS 126 (538)
T ss_pred ceecHHHHHHHHHHHHHHHHH----cCCCCCCEEEEECCCCHH-HHHHHHHHHhcCEEEeccCcccCHHHHHHHHHhcCC
Confidence 357888887666665555432 356889999988886543 345677888899887766 44678889999999999
Q ss_pred eecccCh
Q 011116 228 TYMPVSP 234 (493)
Q Consensus 228 t~l~~~P 234 (493)
+.+++.+
T Consensus 127 ~~li~~~ 133 (538)
T TIGR03208 127 KVFVVPS 133 (538)
T ss_pred eEEEEcc
Confidence 8887654
No 246
>PRK10696 tRNA 2-thiocytidine biosynthesis protein TtcA; Provisional
Probab=32.75 E-value=2e+02 Score=26.38 Aligned_cols=67 Identities=10% Similarity=0.028 Sum_probs=46.8
Q ss_pred HHHHHHhhCC-CCCCCEEEEECCCCCCcHHHHHHHHHHc------C--CeeccCCCC---CCHHHHHHHHhhcCCeEEEE
Q 011116 19 LSHALSKRDS-LCRKTTSLTSSPLPPSTSPVLYFSLLSL------G--VVISPANPL---SSTSEVSHQIQLSKPSIAFA 86 (493)
Q Consensus 19 lA~~L~~~~g-l~~gd~V~l~~~~~~~~~~~~~lA~~~~------G--~~~v~i~~~---~~~~~l~~~l~~~~~~~il~ 86 (493)
+.+.+ .+.+ +.+|++|++-.. -+.|+++++..+... | ..++.+++. ++.+.+..+.+..+..+.+.
T Consensus 16 v~~~i-~~~~li~~~~kilVa~S-GG~DS~~LL~ll~~l~~~~~~~~~l~av~vd~g~~~~~~~~~~~~~~~lgI~~~v~ 93 (258)
T PRK10696 16 VGQAI-ADFNMIEEGDRVMVCLS-GGKDSYTLLDILLNLQKRAPINFELVAVNLDQKQPGFPEHVLPEYLESLGVPYHIE 93 (258)
T ss_pred HHHHH-HHcCCCCCCCEEEEEec-CCHHHHHHHHHHHHHHHhCCCCeEEEEEEecCCCCCCCHHHHHHHHHHhCCCEEEE
Confidence 46677 5544 689999999999 999999888777543 2 344555553 34555677778888777765
Q ss_pred c
Q 011116 87 T 87 (493)
Q Consensus 87 ~ 87 (493)
+
T Consensus 94 ~ 94 (258)
T PRK10696 94 E 94 (258)
T ss_pred E
Confidence 5
No 247
>PRK07008 long-chain-fatty-acid--CoA ligase; Validated
Probab=32.56 E-value=1.1e+02 Score=31.50 Aligned_cols=66 Identities=12% Similarity=0.088 Sum_probs=48.8
Q ss_pred hhCCCCCCCEEEEECCCCCCcHHHHHHHHHHcCCeeccCCCCCCHHHHHHHHhhcCCeEEEEcCCC
Q 011116 25 KRDSLCRKTTSLTSSPLPPSTSPVLYFSLLSLGVVISPANPLSSTSEVSHQIQLSKPSIAFATSHT 90 (493)
Q Consensus 25 ~~~gl~~gd~V~l~~~~~~~~~~~~~lA~~~~G~~~v~i~~~~~~~~l~~~l~~~~~~~il~~~~~ 90 (493)
...++.++|++....|..+.......++++..|+.++...+....+.+...+++.++..+...+..
T Consensus 212 ~~~~~~~~d~~l~~~p~~h~~~~~~~~~~l~~G~~~~~~~~~~~~~~~~~~l~~~~vt~~~~~P~~ 277 (539)
T PRK07008 212 DAMGLSARDAVLPVVPMFHVNAWGLPYSAPLTGAKLVLPGPDLDGKSLYELIEAERVTFSAGVPTV 277 (539)
T ss_pred cccCCCCCceEEecCchHHhhhHHHHHHHHhcCceEEEecCCcCHHHHHHHHHHcCCEEEEechHH
Confidence 346789999998887722222234446778899988776677788999999999999988877644
No 248
>PLN02860 o-succinylbenzoate-CoA ligase
Probab=32.10 E-value=1.7e+02 Score=30.31 Aligned_cols=81 Identities=12% Similarity=0.044 Sum_probs=60.3
Q ss_pred ecchHHHHHHHHHhhhhcccCCCCCCCCCCcEEEEecChhHHHHHHHHHHHHhcCCeEEEe-cCCCHHHHHHHHHhcCee
Q 011116 150 LLSHLNVIAIIAGYYHVTEETDPNEGPPPHPVSFFTLPMFHVFGFFMLVRAASKGETLVFM-ERFDFEKMLKAVENYRVT 228 (493)
Q Consensus 150 ~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pl~~~~g~~~~~~~l~~G~~~~~~-~~~~~~~~~~~l~~~~~t 228 (493)
.+|..++...+..+...+.. .|+.++|++...++-...+ ...++.++..|+..+.. +....+++...+++.+++
T Consensus 32 ~~Ty~el~~~~~~la~~L~~----~Gv~~gd~V~v~~~n~~~~-~~~~la~~~~Gav~vpl~~~~~~~~l~~~l~~~~~~ 106 (563)
T PLN02860 32 RRTGHEFVDGVLSLAAGLLR----LGLRNGDVVAIAALNSDLY-LEWLLAVACAGGIVAPLNYRWSFEEAKSAMLLVRPV 106 (563)
T ss_pred eeeHHHHHHHHHHHHHHHHH----hCCCCCCEEEEEcCCCHHH-HHHHHHHhhccEEEEeCCcccCHHHHHHHHHhcCce
Confidence 47888887766666665532 3678999999888865533 34577788889888877 456789999999999998
Q ss_pred ecccChH
Q 011116 229 YMPVSPP 235 (493)
Q Consensus 229 ~l~~~P~ 235 (493)
.++..+.
T Consensus 107 ~i~~~~~ 113 (563)
T PLN02860 107 MLVTDET 113 (563)
T ss_pred EEEEecc
Confidence 8887653
No 249
>PRK12582 acyl-CoA synthetase; Provisional
Probab=32.06 E-value=1.7e+02 Score=30.92 Aligned_cols=81 Identities=7% Similarity=-0.033 Sum_probs=58.6
Q ss_pred eecchHHHHHHHHHhhhhcccCCCCCCCCCCcEEEEecChhHHHHHHHHHHHHhcCCeEEEecC-CC-----HHHHHHHH
Q 011116 149 VLLSHLNVIAIIAGYYHVTEETDPNEGPPPHPVSFFTLPMFHVFGFFMLVRAASKGETLVFMER-FD-----FEKMLKAV 222 (493)
Q Consensus 149 v~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pl~~~~g~~~~~~~l~~G~~~~~~~~-~~-----~~~~~~~l 222 (493)
-.+|...+...+..+...+.. .|++++|++...++-.. -....++.++..|+..+..+. .+ .+++...+
T Consensus 79 ~~~Ty~el~~~v~~lA~~L~~----~Gv~~gd~V~i~~~n~~-e~~~~~lA~~~~G~v~vpl~p~~~~~~~~~~~l~~~l 153 (624)
T PRK12582 79 RKVTYGEAKRAVDALAQALLD----LGLDPGRPVMILSGNSI-EHALMTLAAMQAGVPAAPVSPAYSLMSHDHAKLKHLF 153 (624)
T ss_pred EEeEHHHHHHHHHHHHHHHHH----cCCCCCCEEEEecCCCH-HHHHHHHHHHHcCCeEeeccCccccccCCHHHHHHHH
Confidence 467888887777776665532 36789999999888443 334667788899998887743 23 37888889
Q ss_pred HhcCeeecccCh
Q 011116 223 ENYRVTYMPVSP 234 (493)
Q Consensus 223 ~~~~~t~l~~~P 234 (493)
+..++..++...
T Consensus 154 ~~~~~~~vi~~~ 165 (624)
T PRK12582 154 DLVKPRVVFAQS 165 (624)
T ss_pred HhcCCcEEEecC
Confidence 888888777653
No 250
>PRK10083 putative oxidoreductase; Provisional
Probab=31.41 E-value=1.4e+02 Score=28.32 Aligned_cols=61 Identities=10% Similarity=0.021 Sum_probs=38.1
Q ss_pred HHHhhCCCCCCCEEEEECCCCCCcHHHHHHHHHHcCCe-eccCCCCCCHHHHHHHHhhcCCeEEEE
Q 011116 22 ALSKRDSLCRKTTSLTSSPLPPSTSPVLYFSLLSLGVV-ISPANPLSSTSEVSHQIQLSKPSIAFA 86 (493)
Q Consensus 22 ~L~~~~gl~~gd~V~l~~~~~~~~~~~~~lA~~~~G~~-~v~i~~~~~~~~l~~~l~~~~~~~il~ 86 (493)
.+....++++|++|+++.. ...-..++.+|-...|+. ++.++. +.+. ..++...+++.++.
T Consensus 151 ~~~~~~~~~~g~~vlI~g~-g~vG~~~~~~a~~~~G~~~v~~~~~--~~~~-~~~~~~~Ga~~~i~ 212 (339)
T PRK10083 151 NVTGRTGPTEQDVALIYGA-GPVGLTIVQVLKGVYNVKAVIVADR--IDER-LALAKESGADWVIN 212 (339)
T ss_pred HHHHhcCCCCCCEEEEECC-CHHHHHHHHHHHHhCCCCEEEEEcC--CHHH-HHHHHHhCCcEEec
Confidence 3334567999999999887 666666655555445874 444432 3333 45566677776664
No 251
>PRK07470 acyl-CoA synthetase; Validated
Probab=31.36 E-value=2.7e+02 Score=28.40 Aligned_cols=83 Identities=11% Similarity=-0.055 Sum_probs=60.7
Q ss_pred ecchHHHHHHHHHhhhhcccCCCCCCCCCCcEEEEecChhHHHHHHHHHHHHhcCCeEEEe-cCCCHHHHHHHHHhcCee
Q 011116 150 LLSHLNVIAIIAGYYHVTEETDPNEGPPPHPVSFFTLPMFHVFGFFMLVRAASKGETLVFM-ERFDFEKMLKAVENYRVT 228 (493)
Q Consensus 150 ~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pl~~~~g~~~~~~~l~~G~~~~~~-~~~~~~~~~~~l~~~~~t 228 (493)
.+|..++...+..+...+.. .|+.+++++....+-... ....++.++..|+..+.. ...+.+++...+++.+++
T Consensus 32 ~~Ty~el~~~~~~~a~~L~~----~g~~~g~~v~i~~~~~~~-~~~~~lA~~~~G~~~v~l~~~~~~~~~~~~~~~~~~~ 106 (528)
T PRK07470 32 SWTWREIDARVDALAAALAA----RGVRKGDRILVHSRNCNQ-MFESMFAAFRLGAVWVPTNFRQTPDEVAYLAEASGAR 106 (528)
T ss_pred cccHHHHHHHHHHHHHHHHH----hCCCCCCEEEEEcCCCHH-HHHHHHHHHhCCeEEEecCccCCHHHHHHHHHhcCce
Confidence 47788887666665555432 356889999888776553 235678888899888877 456789999999999999
Q ss_pred ecccChHHH
Q 011116 229 YMPVSPPLI 237 (493)
Q Consensus 229 ~l~~~P~~~ 237 (493)
.++..+...
T Consensus 107 ~~i~~~~~~ 115 (528)
T PRK07470 107 AMICHADFP 115 (528)
T ss_pred EEEEcchhH
Confidence 988876543
No 252
>COG2351 Transthyretin-like protein [General function prediction only]
Probab=31.07 E-value=88 Score=24.49 Aligned_cols=16 Identities=13% Similarity=0.175 Sum_probs=12.1
Q ss_pred ccccccCCceEEEEcC
Q 011116 308 SVGRLAELMEAKIVDP 323 (493)
Q Consensus 308 ~~g~p~~~~~~~i~d~ 323 (493)
..|+|-+++++++...
T Consensus 19 a~GkPAagv~V~L~rl 34 (124)
T COG2351 19 ASGKPAAGVKVELYRL 34 (124)
T ss_pred ccCCcCCCCEEEEEEe
Confidence 4678888888887663
No 253
>cd01519 RHOD_HSP67B2 Member of the Rhodanese Homology Domain superfamily. This CD includes the heat shock protein 67B2 of Drosophila melanogaster and other similar proteins, many of which are uncharacterized.
Probab=30.93 E-value=1e+02 Score=23.27 Aligned_cols=39 Identities=10% Similarity=-0.076 Sum_probs=31.0
Q ss_pred HHHHHHhhCCCCCCCEEEEECCCCCCcHHHHHHHHHHcCCe
Q 011116 19 LSHALSKRDSLCRKTTSLTSSPLPPSTSPVLYFSLLSLGVV 59 (493)
Q Consensus 19 lA~~L~~~~gl~~gd~V~l~~~~~~~~~~~~~lA~~~~G~~ 59 (493)
+...+ ...++.+++.|++++. ++.....+...+..+|..
T Consensus 54 ~~~~~-~~~~~~~~~~ivv~c~-~g~~s~~~~~~l~~~G~~ 92 (106)
T cd01519 54 FEKKY-GFPKPSKDKELIFYCK-AGVRSKAAAELARSLGYE 92 (106)
T ss_pred HHHHh-cccCCCCCCeEEEECC-CcHHHHHHHHHHHHcCCc
Confidence 35556 5567888999999999 888887888888888864
No 254
>PRK06381 threonine synthase; Validated
Probab=30.79 E-value=95 Score=29.50 Aligned_cols=57 Identities=9% Similarity=0.054 Sum_probs=41.2
Q ss_pred CCEEEEECCCCCCcHHHHHHHHHHcCCeeccCCCCCCHHHHHHHHhhcCCeEEEEcCC
Q 011116 32 KTTSLTSSPLPPSTSPVLYFSLLSLGVVISPANPLSSTSEVSHQIQLSKPSIAFATSH 89 (493)
Q Consensus 32 gd~V~l~~~~~~~~~~~~~lA~~~~G~~~v~i~~~~~~~~l~~~l~~~~~~~il~~~~ 89 (493)
|....+... .+-.-..+-++|...|..+..+-|...+..-...++..+++++++..+
T Consensus 62 g~~~lv~aS-sGN~g~alA~~aa~~G~~~~ivvp~~~~~~~~~~l~~~GA~V~~~~~~ 118 (319)
T PRK06381 62 GYSGITVGT-CGNYGASIAYFARLYGLKAVIFIPRSYSNSRVKEMEKYGAEIIYVDGK 118 (319)
T ss_pred CCCEEEEeC-CcHHHHHHHHHHHHcCCcEEEEECCCCCHHHHHHHHHcCCEEEEcCCC
Confidence 333334455 677777888888899988776655555555667899999999999753
No 255
>PRK12406 long-chain-fatty-acid--CoA ligase; Provisional
Probab=30.73 E-value=2.6e+02 Score=28.36 Aligned_cols=86 Identities=14% Similarity=-0.019 Sum_probs=61.5
Q ss_pred ecchHHHHHHHHHhhhhcccCCCCCCCCCCcEEEEecChhHHHHHHHHHHHHhcCCeEEEe-cCCCHHHHHHHHHhcCee
Q 011116 150 LLSHLNVIAIIAGYYHVTEETDPNEGPPPHPVSFFTLPMFHVFGFFMLVRAASKGETLVFM-ERFDFEKMLKAVENYRVT 228 (493)
Q Consensus 150 ~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pl~~~~g~~~~~~~l~~G~~~~~~-~~~~~~~~~~~l~~~~~t 228 (493)
.+|...+...+......+.. .|+.+++++....|-... ....++.++..|+..+.. +....+++...++..+++
T Consensus 11 ~~Ty~el~~~~~~la~~l~~----~g~~~g~~V~v~~~~~~~-~~~~~lA~~~~G~~~v~l~~~~~~~~~~~~l~~~~~~ 85 (509)
T PRK12406 11 RRSFDELAQRAARAAGGLAA----LGVRPGDCVALLMRNDFA-FFEAAYAAMRLGAYAVPVNWHFKPEEIAYILEDSGAR 85 (509)
T ss_pred eecHHHHHHHHHHHHHHHHH----cCCCCCCEEEEEcCCCHH-HHHHHHHHHHcCeEEEecCcccCHHHHHHHHhccCCc
Confidence 45677776655555554422 366899999888776553 335677788888888877 456789999999999999
Q ss_pred ecccChHHHHHH
Q 011116 229 YMPVSPPLIVAF 240 (493)
Q Consensus 229 ~l~~~P~~~~~l 240 (493)
.++........+
T Consensus 86 ~i~~~~~~~~~~ 97 (509)
T PRK12406 86 VLIAHADLLHGL 97 (509)
T ss_pred EEEEccchhhhh
Confidence 998776655544
No 256
>PRK13390 acyl-CoA synthetase; Provisional
Probab=30.52 E-value=3.3e+02 Score=27.57 Aligned_cols=94 Identities=16% Similarity=0.041 Sum_probs=65.3
Q ss_pred CCCCeEEEEccCCCCCCccceecchHHHHHHHHHhhhhcccCCCCCCCCCCcEEEEecChhHHHHHHHHHHHHhcCCeEE
Q 011116 129 YQSDPAAILYSSGTTGKVKGVLLSHLNVIAIIAGYYHVTEETDPNEGPPPHPVSFFTLPMFHVFGFFMLVRAASKGETLV 208 (493)
Q Consensus 129 ~~~~~~~i~~TSGTTG~pK~v~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pl~~~~g~~~~~~~l~~G~~~~ 208 (493)
.++.++++... +| -.+|...+...+..+...+.. .|+.++|++....+-.... +..++.++..|+..+
T Consensus 10 ~p~~~a~~~~~---~~----~~lTy~el~~~~~~la~~L~~----~gv~~gd~V~i~~~n~~~~-~~~~la~~~~Ga~~~ 77 (501)
T PRK13390 10 APDRPAVIVAE---TG----EQVSYRQLDDDSAALARVLYD----AGLRTGDVVALLSDNSPEA-LVVLWAALRSGLYIT 77 (501)
T ss_pred CCCCcEEEecC---CC----eEeeHHHHHHHHHHHHHHHHH----cCCCCCCEEEEEeCCCHHH-HHHHHHHHHhCCEEe
Confidence 45666654422 22 347888887777776666542 3678999998887766532 356788888999887
Q ss_pred Ee-cCCCHHHHHHHHHhcCeeecccCh
Q 011116 209 FM-ERFDFEKMLKAVENYRVTYMPVSP 234 (493)
Q Consensus 209 ~~-~~~~~~~~~~~l~~~~~t~l~~~P 234 (493)
.. ....++++...++..+++.+....
T Consensus 78 ~l~~~~~~~~~~~~~~~~~~~~~i~~~ 104 (501)
T PRK13390 78 AINHHLTAPEADYIVGDSGARVLVASA 104 (501)
T ss_pred ccccCCCHHHHHHHHHhcCCcEEEEcc
Confidence 66 456788888888888888776644
No 257
>PRK06164 acyl-CoA synthetase; Validated
Probab=30.29 E-value=1e+02 Score=31.69 Aligned_cols=68 Identities=10% Similarity=0.130 Sum_probs=50.5
Q ss_pred HHHhhCCCCCCCEEEEECCCCCCcHHHHHHHHHHcCCeeccCCCCCCHHHHHHHHhhcCCeEEEEcCCC
Q 011116 22 ALSKRDSLCRKTTSLTSSPLPPSTSPVLYFSLLSLGVVISPANPLSSTSEVSHQIQLSKPSIAFATSHT 90 (493)
Q Consensus 22 ~L~~~~gl~~gd~V~l~~~~~~~~~~~~~lA~~~~G~~~v~i~~~~~~~~l~~~l~~~~~~~il~~~~~ 90 (493)
.+....++.++|++...+|..+.-.+..+++++..|+.++.. +......+...+++.++..++..+..
T Consensus 212 ~~~~~~~~~~~~~~l~~~p~~~~~g~~~~~~~l~~G~~~~~~-~~~~~~~~~~~l~~~~~t~~~~~p~~ 279 (540)
T PRK06164 212 AIARAYGYDPGAVLLAALPFCGVFGFSTLLGALAGGAPLVCE-PVFDAARTARALRRHRVTHTFGNDEM 279 (540)
T ss_pred HHHHhcCCCCCCEEEEcCCchhHHHHHHHHHHHhcCceEEec-CCCCHHHHHHHHHHhCCeeecCCHHH
Confidence 343456889999999998833343445677888889887765 46678888999999998888876543
No 258
>PRK08162 acyl-CoA synthetase; Validated
Probab=29.90 E-value=2.5e+02 Score=28.80 Aligned_cols=86 Identities=10% Similarity=-0.009 Sum_probs=64.1
Q ss_pred ecchHHHHHHHHHhhhhcccCCCCCCCCCCcEEEEecChhHHHHHHHHHHHHhcCCeEEEe-cCCCHHHHHHHHHhcCee
Q 011116 150 LLSHLNVIAIIAGYYHVTEETDPNEGPPPHPVSFFTLPMFHVFGFFMLVRAASKGETLVFM-ERFDFEKMLKAVENYRVT 228 (493)
Q Consensus 150 ~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pl~~~~g~~~~~~~l~~G~~~~~~-~~~~~~~~~~~l~~~~~t 228 (493)
.+|...+...+..+...+.. .+..+++++....+-... ....++.++..|+..+.. +..+.+++...++..+++
T Consensus 43 ~~ty~~L~~~~~~~a~~L~~----~g~~~g~~v~i~~~~~~~-~~~~~lA~~~~G~~~vpl~~~~~~~~~~~~l~~~~~~ 117 (545)
T PRK08162 43 RRTWAETYARCRRLASALAR----RGIGRGDTVAVLLPNIPA-MVEAHFGVPMAGAVLNTLNTRLDAASIAFMLRHGEAK 117 (545)
T ss_pred EEEHHHHHHHHHHHHHHHHH----hCCCCCCEEEEECCCchH-HHHHHHHHHHhCcEEeccccccChHHHHHHHHhCCCe
Confidence 47888887776666665532 356889999888887652 235677888888887766 456889999999999999
Q ss_pred ecccChHHHHHH
Q 011116 229 YMPVSPPLIVAF 240 (493)
Q Consensus 229 ~l~~~P~~~~~l 240 (493)
.++..+.....+
T Consensus 118 ~i~~~~~~~~~~ 129 (545)
T PRK08162 118 VLIVDTEFAEVA 129 (545)
T ss_pred EEEEccchhhHH
Confidence 998887665443
No 259
>PRK05852 acyl-CoA synthetase; Validated
Probab=29.76 E-value=4e+02 Score=27.27 Aligned_cols=78 Identities=8% Similarity=0.003 Sum_probs=57.8
Q ss_pred ecchHHHHHHHHHhhhhcccCCCCCCCCCCcEEEEecChhHHHHHHHHHHHHhcCCeEEEec-CCCHHHHHHHHHhcCee
Q 011116 150 LLSHLNVIAIIAGYYHVTEETDPNEGPPPHPVSFFTLPMFHVFGFFMLVRAASKGETLVFME-RFDFEKMLKAVENYRVT 228 (493)
Q Consensus 150 ~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pl~~~~g~~~~~~~l~~G~~~~~~~-~~~~~~~~~~l~~~~~t 228 (493)
.+|...+..........+.. .|+.+++++...++-.. .....++.++..|+..+..+ ..+..++...++..+++
T Consensus 43 ~~Ty~~l~~~~~~~a~~L~~----~gv~~gd~V~i~~~n~~-~~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~ 117 (534)
T PRK05852 43 AISYRDLARLVDDLAGQLTR----SGLLPGDRVALRMGSNA-EFVVALLAASRADLVVVPLDPALPIAEQRVRSQAAGAR 117 (534)
T ss_pred cccHHHHHHHHHHHHHHHHh----cCCCCCCEEEEECCCcH-HHHHHHHHHHHcCcEEeecCCCCCcHHHHHHHHhCCCC
Confidence 46888887666665555532 36789999988877655 33467888889999988774 46778899999999988
Q ss_pred eccc
Q 011116 229 YMPV 232 (493)
Q Consensus 229 ~l~~ 232 (493)
.++.
T Consensus 118 ~ii~ 121 (534)
T PRK05852 118 VVLI 121 (534)
T ss_pred EEEE
Confidence 8773
No 260
>PRK07786 long-chain-fatty-acid--CoA ligase; Validated
Probab=29.73 E-value=3e+02 Score=28.28 Aligned_cols=83 Identities=11% Similarity=0.005 Sum_probs=60.5
Q ss_pred ecchHHHHHHHHHhhhhcccCCCCCCCCCCcEEEEecChhHHHHHHHHHHHHhcCCeEEEec-CCCHHHHHHHHHhcCee
Q 011116 150 LLSHLNVIAIIAGYYHVTEETDPNEGPPPHPVSFFTLPMFHVFGFFMLVRAASKGETLVFME-RFDFEKMLKAVENYRVT 228 (493)
Q Consensus 150 ~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pl~~~~g~~~~~~~l~~G~~~~~~~-~~~~~~~~~~l~~~~~t 228 (493)
.+|...+......+...+.. .++.+++++...++-...+ ...++.++..|+..+... .....++...+++.++.
T Consensus 42 ~~ty~~l~~~~~~~a~~L~~----~g~~~g~~V~i~~~~~~~~-~~~~~a~~~~G~~~vpl~~~~~~~~~~~~l~~~~~~ 116 (542)
T PRK07786 42 TTTWRELDDRVAALAGALSR----RGVGFGDRVLILMLNRTEF-VESVLAANMLGAIAVPVNFRLTPPEIAFLVSDCGAH 116 (542)
T ss_pred cccHHHHHHHHHHHHHHHHH----cCCCCCCEEEEECCCCHHH-HHHHHHHHHcCeEEEEcCccCCHHHHHHHHHhCCCc
Confidence 57888887666665555432 2568899998887754432 456888889999888774 46789999999999998
Q ss_pred ecccChHHH
Q 011116 229 YMPVSPPLI 237 (493)
Q Consensus 229 ~l~~~P~~~ 237 (493)
.++..+...
T Consensus 117 ~ii~~~~~~ 125 (542)
T PRK07786 117 VVVTEAALA 125 (542)
T ss_pred EEEEccchH
Confidence 887776544
No 261
>cd02071 MM_CoA_mut_B12_BD methylmalonyl CoA mutase B12 binding domain. This domain binds to B12 (adenosylcobamide), which initiates the conversion of succinyl CoA and methylmalonyl CoA by forming an adenosyl radical, which then undergoes a rearrangement exchanging a hydrogen atom with a group attached to a neighboring carbon atom. This family is present in both mammals and bacteria. Bacterial members are heterodimers and involved in the fermentation of pyruvate to propionate. Mammalian members are homodimers and responsible for the conversion of odd-chain fatty acids and branched-chain amino acids via propionyl CoA to succinyl CoA for further degradation.
Probab=29.26 E-value=2.8e+02 Score=21.78 Aligned_cols=83 Identities=18% Similarity=0.097 Sum_probs=48.8
Q ss_pred hHHHHHH-HHHHHHhcCCeEEEec-CCCHHHHHHHHHhcCeeecccChH------HHHHHHhcccCCCCCCCCeeEEEec
Q 011116 189 FHVFGFF-MLVRAASKGETLVFME-RFDFEKMLKAVENYRVTYMPVSPP------LIVAFINSKLTDKYDLSSLQLLGCG 260 (493)
Q Consensus 189 ~~~~g~~-~~~~~l~~G~~~~~~~-~~~~~~~~~~l~~~~~t~l~~~P~------~~~~l~~~~~~~~~~l~~lr~v~~~ 260 (493)
.|..|.. .....-..|..++... ..+++++.+.+.+.+++++...-. .+..+++..++.. ...++ ++.|
T Consensus 11 ~H~lG~~~~~~~l~~~G~~vi~lG~~vp~e~~~~~a~~~~~d~V~iS~~~~~~~~~~~~~~~~L~~~~--~~~i~-i~~G 87 (122)
T cd02071 11 GHDRGAKVIARALRDAGFEVIYTGLRQTPEEIVEAAIQEDVDVIGLSSLSGGHMTLFPEVIELLRELG--AGDIL-VVGG 87 (122)
T ss_pred hhHHHHHHHHHHHHHCCCEEEECCCCCCHHHHHHHHHHcCCCEEEEcccchhhHHHHHHHHHHHHhcC--CCCCE-EEEE
Confidence 6777763 3444445566666664 467899999999999988665522 2333444333322 22333 5556
Q ss_pred CCCCCHHHHHHHHHh
Q 011116 261 GAPLGKEVTLKFKEK 275 (493)
Q Consensus 261 Ge~~~~~~~~~~~~~ 275 (493)
|. .+++..+.+.+.
T Consensus 88 G~-~~~~~~~~~~~~ 101 (122)
T cd02071 88 GI-IPPEDYELLKEM 101 (122)
T ss_pred CC-CCHHHHHHHHHC
Confidence 65 446666666664
No 262
>PRK05677 long-chain-fatty-acid--CoA ligase; Validated
Probab=29.21 E-value=3e+02 Score=28.42 Aligned_cols=84 Identities=10% Similarity=0.067 Sum_probs=62.1
Q ss_pred ecchHHHHHHHHHhhhhcccCCCCCCCCCCcEEEEecChhHHHHHHHHHHHHhcCCeEEEe-cCCCHHHHHHHHHhcCee
Q 011116 150 LLSHLNVIAIIAGYYHVTEETDPNEGPPPHPVSFFTLPMFHVFGFFMLVRAASKGETLVFM-ERFDFEKMLKAVENYRVT 228 (493)
Q Consensus 150 ~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pl~~~~g~~~~~~~l~~G~~~~~~-~~~~~~~~~~~l~~~~~t 228 (493)
.+|...+...+..+...+.. ..|+.+++++...++..... ...++.++..|+..+.. +..+.+++...+++.++.
T Consensus 49 ~~Ty~el~~~~~~la~~L~~---~~gi~~gd~Vai~~~n~~~~-~~~~la~~~~Ga~~v~l~~~~~~~~l~~~l~~~~~~ 124 (562)
T PRK05677 49 TLTYGELYKLSGAFAAWLQQ---HTDLKPGDRIAVQLPNVLQY-PVAVFGAMRAGLIVVNTNPLYTAREMEHQFNDSGAK 124 (562)
T ss_pred eeeHHHHHHHHHHHHHHHHH---hcCCCCCCEEEEECCCCHHH-HHHHHHHHHcCeEEeecCCCCCHHHHHHHHhccCce
Confidence 57888887777776665521 01568999999988875533 35677888899988877 456789999999999999
Q ss_pred ecccChHHH
Q 011116 229 YMPVSPPLI 237 (493)
Q Consensus 229 ~l~~~P~~~ 237 (493)
.++......
T Consensus 125 ~ii~~~~~~ 133 (562)
T PRK05677 125 ALVCLANMA 133 (562)
T ss_pred EEEEecchh
Confidence 988765543
No 263
>PRK11493 sseA 3-mercaptopyruvate sulfurtransferase; Provisional
Probab=29.11 E-value=71 Score=29.74 Aligned_cols=39 Identities=18% Similarity=0.181 Sum_probs=33.8
Q ss_pred HHHHHHhhCCCCCCCEEEEECCCCCCcHHHHHHHHHHcCCe
Q 011116 19 LSHALSKRDSLCRKTTSLTSSPLPPSTSPVLYFSLLSLGVV 59 (493)
Q Consensus 19 lA~~L~~~~gl~~gd~V~l~~~~~~~~~~~~~lA~~~~G~~ 59 (493)
|...| .+.|+.+++.|.+++. ++.....+++++..+|..
T Consensus 219 l~~~~-~~~g~~~~~~ii~yC~-~G~~A~~~~~~l~~~G~~ 257 (281)
T PRK11493 219 LDAIF-FGRGVSFDRPIIASCG-SGVTAAVVVLALATLDVP 257 (281)
T ss_pred HHHHH-HhcCCCCCCCEEEECC-cHHHHHHHHHHHHHcCCC
Confidence 44556 6789999999999999 999999999999999975
No 264
>PRK08751 putative long-chain fatty acyl CoA ligase; Provisional
Probab=29.04 E-value=3e+02 Score=28.37 Aligned_cols=98 Identities=8% Similarity=0.018 Sum_probs=67.5
Q ss_pred CCCCeEEEEccCCCCCCccceecchHHHHHHHHHhhhhcccCCCCCCCCCCcEEEEecChhHHHHHHHHHHHHhcCCeEE
Q 011116 129 YQSDPAAILYSSGTTGKVKGVLLSHLNVIAIIAGYYHVTEETDPNEGPPPHPVSFFTLPMFHVFGFFMLVRAASKGETLV 208 (493)
Q Consensus 129 ~~~~~~~i~~TSGTTG~pK~v~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pl~~~~g~~~~~~~l~~G~~~~ 208 (493)
.++.++.+.. | -.+|...+......+...+.. ..|.++++++...+|-... ....++.++..|+..+
T Consensus 38 ~~~~~a~~~~--~-------~~~Ty~el~~~~~~la~~L~~---~~g~~~g~~V~i~~~~~~~-~~~~~lA~~~~G~~~v 104 (560)
T PRK08751 38 FADRPAYHSF--G-------KTITYREADQLVEQFAAYLLG---ELQLKKGDRVALMMPNCLQ-YPIATFGVLRAGLTVV 104 (560)
T ss_pred CCCCceEEEC--C-------ceeeHHHHHHHHHHHHHHHHH---HhCCCCCCEEEEECCCCHH-HHHHHHHHHHhCeEEe
Confidence 4566665532 1 247888887666665554410 0256889999888876543 2356788888999988
Q ss_pred Ee-cCCCHHHHHHHHHhcCeeecccChHHHHH
Q 011116 209 FM-ERFDFEKMLKAVENYRVTYMPVSPPLIVA 239 (493)
Q Consensus 209 ~~-~~~~~~~~~~~l~~~~~t~l~~~P~~~~~ 239 (493)
.. +....+++...+++.+++.++........
T Consensus 105 ~l~p~~~~~~~~~~l~~~~~~~vi~~~~~~~~ 136 (560)
T PRK08751 105 NVNPLYTPRELKHQLIDSGASVLVVIDNFGTT 136 (560)
T ss_pred ccCccCCHHHHHHHHHhcCCeEEEEcchhHHH
Confidence 76 55678999999999999998877655433
No 265
>PRK12476 putative fatty-acid--CoA ligase; Provisional
Probab=28.99 E-value=6.8e+02 Score=26.18 Aligned_cols=103 Identities=13% Similarity=-0.012 Sum_probs=70.4
Q ss_pred CCCCeEEEEcc--CCCCCCccceecchHHHHHHHHHhhhhcccCCCCCCCCCCcEEEEecChhHHHHHHHHHHHHhcCCe
Q 011116 129 YQSDPAAILYS--SGTTGKVKGVLLSHLNVIAIIAGYYHVTEETDPNEGPPPHPVSFFTLPMFHVFGFFMLVRAASKGET 206 (493)
Q Consensus 129 ~~~~~~~i~~T--SGTTG~pK~v~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pl~~~~g~~~~~~~l~~G~~ 206 (493)
.++.++++... .+++|. ...+|...+...+..+...+.. .+.++|++...++.... ....++.++..|+.
T Consensus 47 ~~~~~a~~~~~~~~~~~g~--~~~~Ty~el~~~~~~lA~~L~~-----~~~~gd~V~l~~~n~~e-~~~~~lA~~~aG~v 118 (612)
T PRK12476 47 VGDTVAYRYLDHSHSAAGC--AVELTWTQLGVRLRAVGARLQQ-----VAGPGDRVAILAPQGID-YVAGFFAAIKAGTI 118 (612)
T ss_pred CCCceEEEEEccCCCCCCc--ceEEeHHHHHHHHHHHHHHHHH-----hcCCCCEEEEECCCChh-HHHHHHHHHHcCce
Confidence 45666665432 112232 2357888887777776666643 24789999999887753 34567888999998
Q ss_pred EEEe-cC-CC--HHHHHHHHHhcCeeecccChHHHHH
Q 011116 207 LVFM-ER-FD--FEKMLKAVENYRVTYMPVSPPLIVA 239 (493)
Q Consensus 207 ~~~~-~~-~~--~~~~~~~l~~~~~t~l~~~P~~~~~ 239 (493)
.+.. +. .. .+++...++..++..+++.+.....
T Consensus 119 ~vpl~~~~~~~~~~~l~~~l~~~~~~~li~~~~~~~~ 155 (612)
T PRK12476 119 AVPLFAPELPGHAERLDTALRDAEPTVVLTTTAAAEA 155 (612)
T ss_pred eEecCCCCcchhHHHHHHHHHhCCCCEEEEcHHHHHH
Confidence 8765 33 22 6789999999999999887765543
No 266
>PRK02261 methylaspartate mutase subunit S; Provisional
Probab=28.98 E-value=3.2e+02 Score=22.21 Aligned_cols=42 Identities=14% Similarity=0.131 Sum_probs=36.5
Q ss_pred HHHHHHHHHcCCeeccCCCCCCHHHHHHHHhhcCCeEEEEcC
Q 011116 47 PVLYFSLLSLGVVISPANPLSSTSEVSHQIQLSKPSIAFATS 88 (493)
Q Consensus 47 ~~~~lA~~~~G~~~v~i~~~~~~~~l~~~l~~~~~~~il~~~ 88 (493)
.++...+-..|.-++-+..+.+.+++.....+.+++++..+.
T Consensus 21 ~iv~~~lr~~G~eVi~LG~~vp~e~i~~~a~~~~~d~V~lS~ 62 (137)
T PRK02261 21 KILDRALTEAGFEVINLGVMTSQEEFIDAAIETDADAILVSS 62 (137)
T ss_pred HHHHHHHHHCCCEEEECCCCCCHHHHHHHHHHcCCCEEEEcC
Confidence 355556667799999999999999999999999999999875
No 267
>PTZ00216 acyl-CoA synthetase; Provisional
Probab=28.93 E-value=3.2e+02 Score=29.30 Aligned_cols=89 Identities=6% Similarity=-0.041 Sum_probs=66.1
Q ss_pred ceecchHHHHHHHHHhhhhcccCCCCCCCCCCcEEEEecChhHHHHHHHHHHHHhcCCeEEEe-cCCCHHHHHHHHHhcC
Q 011116 148 GVLLSHLNVIAIIAGYYHVTEETDPNEGPPPHPVSFFTLPMFHVFGFFMLVRAASKGETLVFM-ERFDFEKMLKAVENYR 226 (493)
Q Consensus 148 ~v~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pl~~~~g~~~~~~~l~~G~~~~~~-~~~~~~~~~~~l~~~~ 226 (493)
...+|...+...+..+...+.. .|+.++|++...++-..-. ....++++..|+..+.. ...+.+++...+++.+
T Consensus 119 ~~~lTy~el~~~~~~lA~~L~~----~Gv~~gd~V~i~~~n~~e~-~~~~lA~~~~G~v~vpl~~~~~~~~l~~il~~s~ 193 (700)
T PTZ00216 119 TRYITYAELWERIVNFGRGLAE----LGLTKGSNVAIYEETRWEW-LASIYGIWSQSMVAATVYANLGEDALAYALRETE 193 (700)
T ss_pred ceEeEHHHHHHHHHHHHHHHHH----hCCCCCCEEEEEcCCCHHH-HHHHHHHHHcCCeEEeeCCCCCHHHHHhhhhccC
Confidence 4678888887777776666532 4678999999988865422 25677888889887766 5567899999999999
Q ss_pred eeecccChHHHHHHH
Q 011116 227 VTYMPVSPPLIVAFI 241 (493)
Q Consensus 227 ~t~l~~~P~~~~~l~ 241 (493)
+..+++....+..++
T Consensus 194 ~~~lv~~~~~~~~l~ 208 (700)
T PTZ00216 194 CKAIVCNGKNVPNLL 208 (700)
T ss_pred ccEEEECHHHHHHHH
Confidence 999888776555543
No 268
>TIGR01923 menE O-succinylbenzoate-CoA ligase. This model represents an enzyme, O-succinylbenzoate-CoA ligase, which is involved in the fourth step of the menaquinone biosynthesis pathway. O-succinylbenzoate-CoA ligase, together with menB - naphtoate synthase, take 2-succinylbenzoate and convert it into 1,4-di-hydroxy-2- naphtoate.
Probab=28.71 E-value=2.6e+02 Score=27.50 Aligned_cols=60 Identities=10% Similarity=0.044 Sum_probs=47.2
Q ss_pred CCCCCcEEEEecChhHHHHHHHHHHHHhcCCeEEEe-cCCCHHHHHHHHHhcCeeecccChH
Q 011116 175 GPPPHPVSFFTLPMFHVFGFFMLVRAASKGETLVFM-ERFDFEKMLKAVENYRVTYMPVSPP 235 (493)
Q Consensus 175 ~~~~~~~~~~~~pl~~~~g~~~~~~~l~~G~~~~~~-~~~~~~~~~~~l~~~~~t~l~~~P~ 235 (493)
|.+++|++...++... .....++.++..|+..+.. +..+.+.+...+++.++..++..+.
T Consensus 20 g~~~gd~v~i~~~~~~-~~~~~~la~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~ 80 (436)
T TIGR01923 20 GIRSGSRVALVGQNSI-EMVLLLHACLLLGAEIAMLNTRLTENERTNQLEDLDVQLLLTDSL 80 (436)
T ss_pred CCCCCCEEEEEcCCCH-HHHHHHHHHHhcCcEEEecCcCCCHHHHHHHHHhcCCCEEEEcCc
Confidence 5689999999888774 3346678889999988877 4567888999999999888776554
No 269
>PRK06178 acyl-CoA synthetase; Validated
Probab=28.60 E-value=3e+02 Score=28.43 Aligned_cols=87 Identities=8% Similarity=0.018 Sum_probs=64.7
Q ss_pred ecchHHHHHHHHHhhhhcccCCCCCCCCCCcEEEEecChhHHHHHHHHHHHHhcCCeEEEe-cCCCHHHHHHHHHhcCee
Q 011116 150 LLSHLNVIAIIAGYYHVTEETDPNEGPPPHPVSFFTLPMFHVFGFFMLVRAASKGETLVFM-ERFDFEKMLKAVENYRVT 228 (493)
Q Consensus 150 ~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pl~~~~g~~~~~~~l~~G~~~~~~-~~~~~~~~~~~l~~~~~t 228 (493)
.+|..++...+..+...+.. .|.++++.+...++-... ....++.++..|+..+.. +.....++...+++.++.
T Consensus 58 ~~Ty~~l~~~~~~la~~L~~----~g~~~g~~V~i~~~n~~~-~~~~~lA~~~~G~~~v~l~p~~~~~~~~~~l~~~~~~ 132 (567)
T PRK06178 58 VITYAELDELSDRFAALLRQ----RGVGAGDRVAVFLPNCPQ-FHIVFFGILKLGAVHVPVSPLFREHELSYELNDAGAE 132 (567)
T ss_pred eeeHHHHHHHHHHHHHHHHH----cCCCCCCEEEEECCCCcH-HHHHHHHHHHhCeEEeecCCCCCHHHHHHHHHhcCCc
Confidence 47888887766666555432 356889999888887664 335677888899888766 456789999999999999
Q ss_pred ecccChHHHHHHH
Q 011116 229 YMPVSPPLIVAFI 241 (493)
Q Consensus 229 ~l~~~P~~~~~l~ 241 (493)
.++..+.....+.
T Consensus 133 ~ii~~~~~~~~l~ 145 (567)
T PRK06178 133 VLLALDQLAPVVE 145 (567)
T ss_pred EEEEccchHHHHH
Confidence 9998887665443
No 270
>PRK03640 O-succinylbenzoic acid--CoA ligase; Provisional
Probab=28.51 E-value=3.3e+02 Score=27.24 Aligned_cols=82 Identities=9% Similarity=0.079 Sum_probs=61.0
Q ss_pred ecchHHHHHHHHHhhhhcccCCCCCCCCCCcEEEEecChhHHHHHHHHHHHHhcCCeEEEec-CCCHHHHHHHHHhcCee
Q 011116 150 LLSHLNVIAIIAGYYHVTEETDPNEGPPPHPVSFFTLPMFHVFGFFMLVRAASKGETLVFME-RFDFEKMLKAVENYRVT 228 (493)
Q Consensus 150 ~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pl~~~~g~~~~~~~l~~G~~~~~~~-~~~~~~~~~~l~~~~~t 228 (493)
.+|...+...+......+.. .++.+++++....|-... ....++.++..|+..+..+ ..+.+++...+++.++.
T Consensus 27 ~~Ty~el~~~~~~~a~~L~~----~g~~~~~~v~i~~~~~~~-~~~~~la~~~~G~~~v~i~~~~~~~~~~~~~~~~~~~ 101 (483)
T PRK03640 27 KVTFMELHEAVVSVAGKLAA----LGVKKGDRVALLMKNGME-MILVIHALQQLGAVAVLLNTRLSREELLWQLDDAEVK 101 (483)
T ss_pred eeeHHHHHHHHHHHHHHHHH----cCCCCCCEEEEECCCCHH-HHHHHHHHHhCCcEEEecCcCCCHHHHHHHHHhCCCC
Confidence 47888887766666555432 356889999988887654 3567888899999998885 46789999999988888
Q ss_pred ecccChHH
Q 011116 229 YMPVSPPL 236 (493)
Q Consensus 229 ~l~~~P~~ 236 (493)
.++.....
T Consensus 102 ~vi~~~~~ 109 (483)
T PRK03640 102 CLITDDDF 109 (483)
T ss_pred EEEEcchh
Confidence 77665543
No 271
>PRK07059 Long-chain-fatty-acid--CoA ligase; Validated
Probab=28.18 E-value=3e+02 Score=28.32 Aligned_cols=84 Identities=6% Similarity=0.020 Sum_probs=62.2
Q ss_pred eecchHHHHHHHHHhhhhcccCCCCCCCCCCcEEEEecChhHHHHHHHHHHHHhcCCeEEEe-cCCCHHHHHHHHHhcCe
Q 011116 149 VLLSHLNVIAIIAGYYHVTEETDPNEGPPPHPVSFFTLPMFHVFGFFMLVRAASKGETLVFM-ERFDFEKMLKAVENYRV 227 (493)
Q Consensus 149 v~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pl~~~~g~~~~~~~l~~G~~~~~~-~~~~~~~~~~~l~~~~~ 227 (493)
..+|..++......+...+.. .|+.+++++...++-.... ...++.++..|+..+.. +....+++...+++.++
T Consensus 47 ~~lTy~~l~~~~~~~a~~L~~----~gi~~gd~V~i~~~n~~~~-~~~~la~~~~G~~~v~v~~~~~~~~~~~~~~~~~~ 121 (557)
T PRK07059 47 KAITYGELDELSRALAAWLQS----RGLAKGARVAIMMPNVLQY-PVAIAAVLRAGYVVVNVNPLYTPRELEHQLKDSGA 121 (557)
T ss_pred ceeeHHHHHHHHHHHHHHHHH----hCCCCCCEEEEECCCCHHH-HHHHHHHHhcCeEEeccCcccCHHHHHHHHHccCc
Confidence 357888887776666665532 3568899998887765533 34568888999998877 45678999999999999
Q ss_pred eecccChHHH
Q 011116 228 TYMPVSPPLI 237 (493)
Q Consensus 228 t~l~~~P~~~ 237 (493)
+.++......
T Consensus 122 ~~vi~~~~~~ 131 (557)
T PRK07059 122 EAIVVLENFA 131 (557)
T ss_pred eEEEEchhhH
Confidence 9988766543
No 272
>PF00464 SHMT: Serine hydroxymethyltransferase; InterPro: IPR001085 Synonym(s): Serine hydroxymethyltransferase, Serine aldolase, Threonine aldolase Serine hydroxymethyltransferase (SHMT) is a pyridoxal phosphate (PLP) dependent enzyme and belongs to the aspartate aminotransferase superfamily (fold type I) []. The pyridoxal-P group is attached to a lysine residue around which the sequence is highly conserved in all forms of the enzyme []. The enzyme carries out interconversion of serine and glycine using PLP as the cofactor. SHMT catalyses the transfer of a hydroxymethyl group from N5, N10- methylene tetrahydrofolate to glycine, resulting in the formation of serine and tetrahydrofolate. Both eukaryotic and prokaryotic SHMT enzymes form tight obligate homodimers and the mammalian enzyme forms a homotetramer [, ]. PLP dependent enzymes were previously classified into alpha, beta and gamma classes, based on the chemical characteristics (carbon atom involved) of the reaction they catalysed. The availability of several structures allowed a comprehensive analysis of the evolutionary classification of PLP dependent enzymes, and it was found that the functional classification did not always agree with the evolutionary history of these enzymes. Structure and sequence analysis has revealed that the PLP dependent enzymes can be classified into four major groups of different evolutionary origin: aspartate aminotransferase superfamily (fold type I), tryptophan synthase beta superfamily (fold type II), alanine racemase superfamily (fold type III), D-amino acid superfamily (fold type IV) and glycogen phophorylase family (fold type V) [, ]. In vertebrates, glycine hydroxymethyltransferase exists in a cytoplasmic and a mitochondrial form whereas only one form is found in prokaryotes.; GO: 0004372 glycine hydroxymethyltransferase activity, 0006544 glycine metabolic process, 0006563 L-serine metabolic process; PDB: 3GBX_B 3H7F_A 1YJS_A 2VMW_A 2W7H_A 2W7E_A 2VMY_B 2W7L_A 2VMZ_A 2VMS_A ....
Probab=27.65 E-value=2.8e+02 Score=27.40 Aligned_cols=115 Identities=19% Similarity=0.192 Sum_probs=58.6
Q ss_pred CCCCCEEEEECCCCCCcHH----HHHH-----HHHHcCCeeccCCC---CCCHHHHHHHHhhcCCeEEEEcCCCcccCCC
Q 011116 29 LCRKTTSLTSSPLPPSTSP----VLYF-----SLLSLGVVISPANP---LSSTSEVSHQIQLSKPSIAFATSHTSYKLPS 96 (493)
Q Consensus 29 l~~gd~V~l~~~~~~~~~~----~~~l-----A~~~~G~~~v~i~~---~~~~~~l~~~l~~~~~~~il~~~~~~~~~~~ 96 (493)
++|||+|+-+.. ..--.+ ..-. .-...-.+..++++ ....+++..++++.+|++|++..+.+....+
T Consensus 107 l~pGD~Im~l~l-~~GGHlshg~~~~~~~~~~~~~~~~~~~y~~d~~~~~ID~d~l~~~a~~~kPklIi~G~S~y~~~~d 185 (399)
T PF00464_consen 107 LKPGDTIMGLSL-PHGGHLSHGSSVNFKKISASGLYFESVPYPVDPDTGLIDYDELEKLAKEHKPKLIICGASSYPRPID 185 (399)
T ss_dssp T-TT-EEEEEEG-GGT--GGGT-TTSHSBSSHHHHHSEEEEEEB-TTTSSB-HHHHHHHHHHH--SEEEEE-SSTSS---
T ss_pred HhhcCcEEecCh-hhcccccccccccccccccccceEEEEeeeeecCCCeECHHHHHHHHhhcCCCEEEECchhccCccC
Confidence 489999988876 432111 1111 22223355566764 4557999999999999999999876664332
Q ss_pred ----------CCcEEEecCchhhhhhccCcccccccCCCCCCCCCCeEEEEccCCCC--CCccceecch
Q 011116 97 ----------NLRTILMDSPEFISLLNQNEDVADFANSNMTVYQSDPAAILYSSGTT--GKVKGVLLSH 153 (493)
Q Consensus 97 ----------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~TSGTT--G~pK~v~~t~ 153 (493)
....+.+|--.+.-+++... .+.+. +..| .+.+|+--| |...|+.++.
T Consensus 186 ~~~~reIad~vga~l~~D~sH~~GLIa~g~-----~~~P~--~~AD--vvt~sThKtl~GPrggiI~~~ 245 (399)
T PF00464_consen 186 FKRFREIADEVGAYLMADISHIAGLIAGGL-----FPNPF--PYAD--VVTGSTHKTLRGPRGGIILTN 245 (399)
T ss_dssp HHHHHHHHHHTT-EEEEE-TTTHHHHHTTS-----S--GC--CTSS--EEEEESSGGG-SSS-EEEEES
T ss_pred HHHHHHHHHhcCcEEEecccccccceehhe-----ecCcc--ccce--EEEeeccccccccCceEEEEc
Confidence 22355566556666666653 11111 1123 333333333 7778899998
No 273
>PF01861 DUF43: Protein of unknown function DUF43; InterPro: IPR002723 This family of prokaryotic proteins have not been characterised. All the members are 350-400 amino acids long.; PDB: 2QM3_A.
Probab=27.26 E-value=1.5e+02 Score=26.81 Aligned_cols=87 Identities=13% Similarity=0.013 Sum_probs=40.0
Q ss_pred cccccccccchhhhHHHHHHhhCCCCCCCEEEEECCCCCCcHHHHHHHHHHcCCeeccCCCCCCHHHHHHHHhhcCCeEE
Q 011116 5 VKASATANSSARFTLSHALSKRDSLCRKTTSLTSSPLPPSTSPVLYFSLLSLGVVISPANPLSSTSEVSHQIQLSKPSIA 84 (493)
Q Consensus 5 ~~~~~~~~~~~~~~lA~~L~~~~gl~~gd~V~l~~~~~~~~~~~~~lA~~~~G~~~v~i~~~~~~~~l~~~l~~~~~~~i 84 (493)
||.+.|++-+-+. |.++ .+.|-=.|.+|.++.. +...++++.+.......+++=++... .+-+....++.+..+-
T Consensus 21 DQ~~~T~eT~~~R--a~~~-~~~gdL~gk~il~lGD-DDLtSlA~al~~~~~~I~VvDiDeRl-l~fI~~~a~~~gl~i~ 95 (243)
T PF01861_consen 21 DQGYATPETTLRR--AALM-AERGDLEGKRILFLGD-DDLTSLALALTGLPKRITVVDIDERL-LDFINRVAEEEGLPIE 95 (243)
T ss_dssp T---B-HHHHHHH--HHHH-HHTT-STT-EEEEES--TT-HHHHHHHHT--SEEEEE-S-HHH-HHHHHHHHHHHT--EE
T ss_pred ccccccHHHHHHH--HHHH-HhcCcccCCEEEEEcC-CcHHHHHHHhhCCCCeEEEEEcCHHH-HHHHHHHHHHcCCceE
Confidence 4555565555555 7777 6667668999999999 88877777665544444444333221 3344444566665644
Q ss_pred EEcCCCcccCCC
Q 011116 85 FATSHTSYKLPS 96 (493)
Q Consensus 85 l~~~~~~~~~~~ 96 (493)
...-+....+++
T Consensus 96 ~~~~DlR~~LP~ 107 (243)
T PF01861_consen 96 AVHYDLRDPLPE 107 (243)
T ss_dssp EE---TTS---T
T ss_pred EEEecccccCCH
Confidence 444445555543
No 274
>PRK08633 2-acyl-glycerophospho-ethanolamine acyltransferase; Validated
Probab=27.13 E-value=4.6e+02 Score=30.05 Aligned_cols=100 Identities=12% Similarity=-0.061 Sum_probs=72.0
Q ss_pred CCCCCeEEEEccCCCCCCccceecchHHHHHHHHHhhhhcccCCCCCCCCCCcEEEEecChhHHHHHHHHHHHHhcCCeE
Q 011116 128 VYQSDPAAILYSSGTTGKVKGVLLSHLNVIAIIAGYYHVTEETDPNEGPPPHPVSFFTLPMFHVFGFFMLVRAASKGETL 207 (493)
Q Consensus 128 ~~~~~~~~i~~TSGTTG~pK~v~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pl~~~~g~~~~~~~l~~G~~~ 207 (493)
..++.++.+.. .| -.+|..++...+......+.. +..++|++...+|-.... ....+.++..|+..
T Consensus 627 ~~p~~~a~~~~-~~-------~~~Ty~el~~~~~~~a~~L~~-----~~~~g~~V~i~~~n~~~~-~~~~la~~~~G~v~ 692 (1146)
T PRK08633 627 RNWSRLAVADS-TG-------GELSYGKALTGALALARLLKR-----ELKDEENVGILLPPSVAG-ALANLALLLAGKVP 692 (1146)
T ss_pred hcCCCcEEEcC-CC-------CcCcHHHHHHHHHHHHHHHHH-----hCCCCCeEEEECCCchHH-HHHHHHHHHcCCEE
Confidence 45667766532 11 247888887777766666543 247899999888876533 35678889999988
Q ss_pred EEe-cCCCHHHHHHHHHhcCeeecccChHHHHHHH
Q 011116 208 VFM-ERFDFEKMLKAVENYRVTYMPVSPPLIVAFI 241 (493)
Q Consensus 208 ~~~-~~~~~~~~~~~l~~~~~t~l~~~P~~~~~l~ 241 (493)
+.. +....+++...+++.+++.++..+.....+.
T Consensus 693 v~l~~~~~~~~~~~~l~~~~~~~vi~~~~~~~~~~ 727 (1146)
T PRK08633 693 VNLNYTASEAALKSAIEQAQIKTVITSRKFLEKLK 727 (1146)
T ss_pred EEeCCCcCHHHHHHHHHHcCCCEEEEcHHHHHHHh
Confidence 766 4567899999999999999988877665553
No 275
>TIGR03590 PseG pseudaminic acid biosynthesis-associated protein PseG. This protein is found in association with enzymes involved in the biosynthesis of pseudaminic acid, a component of polysaccharide in certain Pseudomonas strains as well as a modification of flagellin in Campylobacter and Hellicobacter. The role of this protein is unclear, although it may participate in N-acetylation in conjunction with, or in the absence of PseH (TIGR03585) as it often scores above the trusted cutoff to pfam00583 representing a family of acetyltransferases.
Probab=26.17 E-value=3.1e+02 Score=25.36 Aligned_cols=66 Identities=20% Similarity=0.143 Sum_probs=46.0
Q ss_pred hhhHHHHHHhhCCCCCCCEEEEECCCCCCcHHHHHHHHHHcCCeeccCCCCC----CHHHHHHHHhhcCCeEEEEcCC
Q 011116 16 RFTLSHALSKRDSLCRKTTSLTSSPLPPSTSPVLYFSLLSLGVVISPANPLS----STSEVSHQIQLSKPSIAFATSH 89 (493)
Q Consensus 16 ~~~lA~~L~~~~gl~~gd~V~l~~~~~~~~~~~~~lA~~~~G~~~v~i~~~~----~~~~l~~~l~~~~~~~il~~~~ 89 (493)
-++||..| ++ .|..|.+++. +....+.. .+...|..+..++-.. ..+++..++++.+++++|+|.-
T Consensus 20 cl~LA~~l-~~----~g~~v~f~~~-~~~~~~~~--~i~~~g~~v~~~~~~~~~~~d~~~~~~~l~~~~~d~vV~D~y 89 (279)
T TIGR03590 20 CLTLARAL-HA----QGAEVAFACK-PLPGDLID--LLLSAGFPVYELPDESSRYDDALELINLLEEEKFDILIVDHY 89 (279)
T ss_pred HHHHHHHH-HH----CCCEEEEEeC-CCCHHHHH--HHHHcCCeEEEecCCCchhhhHHHHHHHHHhcCCCEEEEcCC
Confidence 34578888 54 4668888888 76665443 3457787776664332 2456888899999999999974
No 276
>TIGR02262 benz_CoA_lig benzoate-CoA ligase family. Characterized members of this protein family include benzoate-CoA ligase, 4-hydroxybenzoate-CoA ligase, 2-aminobenzoate-CoA ligase, etc. Members are related to fatty acid and acetate CoA ligases.
Probab=26.06 E-value=4.4e+02 Score=26.62 Aligned_cols=85 Identities=14% Similarity=-0.022 Sum_probs=59.8
Q ss_pred ecchHHHHHHHHHhhhhcccCCCCCCCCCCcEEEEecChhHHHHHHHHHHHHhcCCeEEEec-CCCHHHHHHHHHhcCee
Q 011116 150 LLSHLNVIAIIAGYYHVTEETDPNEGPPPHPVSFFTLPMFHVFGFFMLVRAASKGETLVFME-RFDFEKMLKAVENYRVT 228 (493)
Q Consensus 150 ~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pl~~~~g~~~~~~~l~~G~~~~~~~-~~~~~~~~~~l~~~~~t 228 (493)
.+|..++...+..+...+.. .|..+++++...++-.. .....++.++..|+..+..+ ..+.+++...+++.+++
T Consensus 30 ~~ty~~l~~~~~~~a~~L~~----~g~~~g~~v~l~~~~~~-~~~~~~~a~~~~G~~~v~l~~~~~~~~l~~~~~~~~~~ 104 (508)
T TIGR02262 30 SLSYGELEAQVRRLGAALRR----LGVKREERVLLLMLDGV-DFPIAFLGAIRAGIVPVALNTLLTADDYAYMLEDSRAR 104 (508)
T ss_pred eeeHHHHHHHHHHHHHHHHH----cCCCCCCEEEEECCCCH-HHHHHHHHHHHcCcEEeeccCCCCHHHHHHHHHhcCCe
Confidence 46777776655555544432 25678888888776553 22356778888999888774 56889999999999999
Q ss_pred ecccChHHHHH
Q 011116 229 YMPVSPPLIVA 239 (493)
Q Consensus 229 ~l~~~P~~~~~ 239 (493)
.++........
T Consensus 105 ~~i~~~~~~~~ 115 (508)
T TIGR02262 105 VVFVSGELLPV 115 (508)
T ss_pred EEEEchhhHHH
Confidence 99877655443
No 277
>PRK15481 transcriptional regulatory protein PtsJ; Provisional
Probab=25.71 E-value=6.7e+02 Score=24.87 Aligned_cols=54 Identities=13% Similarity=0.028 Sum_probs=33.7
Q ss_pred CCCCCEEEEECCCCCCcHHHHHHHHHHcCCeeccCCC---CCCHHHHHHHHhhcCCeEEEEc
Q 011116 29 LCRKTTSLTSSPLPPSTSPVLYFSLLSLGVVISPANP---LSSTSEVSHQIQLSKPSIAFAT 87 (493)
Q Consensus 29 l~~gd~V~l~~~~~~~~~~~~~lA~~~~G~~~v~i~~---~~~~~~l~~~l~~~~~~~il~~ 87 (493)
+++||.|++-.| + |....-++...|+.+++++. ....+.+...++. +++++++.
T Consensus 162 ~~pgd~Vlv~~P--~--y~~~~~~~~~~g~~~~~v~~~~~g~~~~~l~~~~~~-~~k~i~~~ 218 (431)
T PRK15481 162 LLPGDSVAVEDP--C--FLSSINMLRYAGFSASPVSVDAEGMQPEKLERALAQ-GARAVILT 218 (431)
T ss_pred CCCCCEEEEeCC--C--cHHHHHHHHHcCCeEEeeccCCCCCCHHHHHHHHhc-CCCEEEEC
Confidence 578999888777 3 33334445556776655533 3556777776654 67766654
No 278
>PRK07867 acyl-CoA synthetase; Validated
Probab=25.70 E-value=3.8e+02 Score=27.49 Aligned_cols=85 Identities=13% Similarity=-0.068 Sum_probs=61.2
Q ss_pred ecchHHHHHHHHHhhhhcccCCCCCCCCCCcEEEEecChhHHHHHHHHHHHHhcCCeEEEe-cCCCHHHHHHHHHhcCee
Q 011116 150 LLSHLNVIAIIAGYYHVTEETDPNEGPPPHPVSFFTLPMFHVFGFFMLVRAASKGETLVFM-ERFDFEKMLKAVENYRVT 228 (493)
Q Consensus 150 ~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pl~~~~g~~~~~~~l~~G~~~~~~-~~~~~~~~~~~l~~~~~t 228 (493)
.+|...+...+..+...+... .+..+++++...++-.. .....++.++..|+..+.. +....+++...++..++.
T Consensus 28 ~~Ty~el~~~v~~lA~~L~~~---~~~~~~~~V~i~~~n~~-~~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~ 103 (529)
T PRK07867 28 FTSWREHIRGSAARAAALRAR---LDPTRPPHVGVLLDNTP-EFSLLLGAAALSGIVPVGLNPTRRGAALARDIAHADCQ 103 (529)
T ss_pred EEeHHHHHHHHHHHHHHHHHh---hCCCCCCEEEEECCCCH-HHHHHHHHHHhcCCEEEEecCCCChHHHHHHHHhCCCe
Confidence 478888877766666665431 13466788887777543 2335678889999998877 456789999999999999
Q ss_pred ecccChHHHH
Q 011116 229 YMPVSPPLIV 238 (493)
Q Consensus 229 ~l~~~P~~~~ 238 (493)
+++.......
T Consensus 104 ~li~~~~~~~ 113 (529)
T PRK07867 104 LVLTESAHAE 113 (529)
T ss_pred EEEECHhHHH
Confidence 9888876554
No 279
>KOG1252 consensus Cystathionine beta-synthase and related enzymes [Amino acid transport and metabolism]
Probab=25.42 E-value=2.9e+02 Score=26.36 Aligned_cols=63 Identities=11% Similarity=0.041 Sum_probs=53.4
Q ss_pred CCCCCCCEEEEECCCCCCcHHHHHHHHHHcCCeeccCCCCCCHHHHHHHHhhcCCeEEEEcCCC
Q 011116 27 DSLCRKTTSLTSSPLPPSTSPVLYFSLLSLGVVISPANPLSSTSEVSHQIQLSKPSIAFATSHT 90 (493)
Q Consensus 27 ~gl~~gd~V~l~~~~~~~~~~~~~lA~~~~G~~~v~i~~~~~~~~l~~~l~~~~~~~il~~~~~ 90 (493)
--++||..+.+=-. .+-.=+..-+.|..-|..++.+-|..-..+-..+|+..++.+|.++++.
T Consensus 98 G~i~pg~stliEpT-SGNtGigLA~~~a~~Gyk~i~tmP~~ms~Ek~~~l~a~Gaeii~tp~a~ 160 (362)
T KOG1252|consen 98 GLITPGKSTLIEPT-SGNTGIGLAYMAALRGYKCIITMPEKMSKEKRILLRALGAEIILTPPAA 160 (362)
T ss_pred CCccCCceEEEecC-CCchHHHHHHHHHHcCceEEEEechhhhHHHHHHHHHcCCEEEecChHH
Confidence 34799999988888 8888888888899999998888777667777899999999999998753
No 280
>PRK06060 acyl-CoA synthetase; Validated
Probab=25.07 E-value=3.6e+02 Score=28.89 Aligned_cols=82 Identities=15% Similarity=0.137 Sum_probs=59.6
Q ss_pred ecchHHHHHHHHHhhhhcccCCCCCCCCCCcEEEEecChhHHHHHHHHHHHHhcCCeEEEec-CCCHHHHHHHHHhcCee
Q 011116 150 LLSHLNVIAIIAGYYHVTEETDPNEGPPPHPVSFFTLPMFHVFGFFMLVRAASKGETLVFME-RFDFEKMLKAVENYRVT 228 (493)
Q Consensus 150 ~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pl~~~~g~~~~~~~l~~G~~~~~~~-~~~~~~~~~~l~~~~~t 228 (493)
.+|...+......+...+.. .|..+++++...++-...+ ...++.++..|+..+..+ ....+++...+++.++.
T Consensus 30 ~~Ty~eL~~~~~~lA~~L~~----~g~~~g~~V~i~~~~~~~~-~~~~la~~~aG~~~vpi~p~~~~~~l~~~l~~~~~~ 104 (705)
T PRK06060 30 VVTHGQIHDGAARLGEVLRN----RGLSSGDRVLLCLPDSPDL-VQLLLACLARGVMAFLANPELHRDDHALAARNTEPA 104 (705)
T ss_pred ceeHHHHHHHHHHHHHHHHH----cCCCCCCEEEEECCCCHHH-HHHHHHHHHhCcEEEecCCCCCHHHHHHHHhcCCCc
Confidence 37888887776666665533 3678999999888866533 356778888998877764 46778888888888888
Q ss_pred ecccChHH
Q 011116 229 YMPVSPPL 236 (493)
Q Consensus 229 ~l~~~P~~ 236 (493)
+++.....
T Consensus 105 ~vi~~~~~ 112 (705)
T PRK06060 105 LVVTSDAL 112 (705)
T ss_pred EEEEchHH
Confidence 87765543
No 281
>PRK06018 putative acyl-CoA synthetase; Provisional
Probab=24.89 E-value=2.9e+02 Score=28.31 Aligned_cols=84 Identities=5% Similarity=-0.141 Sum_probs=60.7
Q ss_pred ecchHHHHHHHHHhhhhcccCCCCCCCCCCcEEEEecChhHHHHHHHHHHHHhcCCeEEEe-cCCCHHHHHHHHHhcCee
Q 011116 150 LLSHLNVIAIIAGYYHVTEETDPNEGPPPHPVSFFTLPMFHVFGFFMLVRAASKGETLVFM-ERFDFEKMLKAVENYRVT 228 (493)
Q Consensus 150 ~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pl~~~~g~~~~~~~l~~G~~~~~~-~~~~~~~~~~~l~~~~~t 228 (493)
.+|...+......+...+.. .|..+++++...++-.... ...++.++..|+..+.. +....+++...++..++.
T Consensus 39 ~~Ty~el~~~v~~la~~L~~----~g~~~gd~v~i~~~~~~~~-~~~~la~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~ 113 (542)
T PRK06018 39 RTTYAQIHDRALKVSQALDR----DGIKLGDRVATIAWNTWRH-LEAWYGIMGIGAICHTVNPRLFPEQIAWIINHAEDR 113 (542)
T ss_pred EEEHHHHHHHHHHHHHHHHH----cCCCCCCEEEEEcCCchHH-HHHHHHHHhcCeEeeccccccCHHHHHHHHhccCCC
Confidence 46888887766666665532 3568899998887765533 23566778888888877 456789999999999999
Q ss_pred ecccChHHHH
Q 011116 229 YMPVSPPLIV 238 (493)
Q Consensus 229 ~l~~~P~~~~ 238 (493)
.++.......
T Consensus 114 ~i~~~~~~~~ 123 (542)
T PRK06018 114 VVITDLTFVP 123 (542)
T ss_pred EEEEccccHH
Confidence 8887665433
No 282
>PLN02723 3-mercaptopyruvate sulfurtransferase
Probab=24.28 E-value=91 Score=29.70 Aligned_cols=39 Identities=18% Similarity=0.276 Sum_probs=33.4
Q ss_pred HHHHHHhhCCCCCCCEEEEECCCCCCcHHHHHHHHHHcCCe
Q 011116 19 LSHALSKRDSLCRKTTSLTSSPLPPSTSPVLYFSLLSLGVV 59 (493)
Q Consensus 19 lA~~L~~~~gl~~gd~V~l~~~~~~~~~~~~~lA~~~~G~~ 59 (493)
|...+ .+.|+.+++.|.+++. .+.....+++++-.+|..
T Consensus 257 l~~~~-~~~gi~~~~~iv~yC~-sG~~A~~~~~~L~~~G~~ 295 (320)
T PLN02723 257 LKKRF-EQEGISLDSPIVASCG-TGVTACILALGLHRLGKT 295 (320)
T ss_pred HHHHH-HhcCCCCCCCEEEECC-cHHHHHHHHHHHHHcCCC
Confidence 45556 6679999999999999 999999999999999965
No 283
>COG0604 Qor NADPH:quinone reductase and related Zn-dependent oxidoreductases [Energy production and conversion / General function prediction only]
Probab=24.25 E-value=3e+02 Score=26.23 Aligned_cols=62 Identities=15% Similarity=0.073 Sum_probs=43.4
Q ss_pred HHHHhhCCCCCCCEEEEECCCCCCcHHHHHHHHHHcCCeeccCCCCCCHHHHHHHHhhcCCeEEEE
Q 011116 21 HALSKRDSLCRKTTSLTSSPLPPSTSPVLYFSLLSLGVVISPANPLSSTSEVSHQIQLSKPSIAFA 86 (493)
Q Consensus 21 ~~L~~~~gl~~gd~V~l~~~~~~~~~~~~~lA~~~~G~~~v~i~~~~~~~~l~~~l~~~~~~~il~ 86 (493)
..|....++++|++|.+....-++-.+++++|-..-+.+++... +.++.. .+.+.+++.++.
T Consensus 132 ~~l~~~~~l~~g~~VLV~gaaGgVG~~aiQlAk~~G~~~v~~~~---s~~k~~-~~~~lGAd~vi~ 193 (326)
T COG0604 132 LALFDRAGLKPGETVLVHGAAGGVGSAAIQLAKALGATVVAVVS---SSEKLE-LLKELGADHVIN 193 (326)
T ss_pred HHHHHhcCCCCCCEEEEecCCchHHHHHHHHHHHcCCcEEEEec---CHHHHH-HHHhcCCCEEEc
Confidence 33433467999999999997355777777776655434444433 556667 999999998887
No 284
>PRK04813 D-alanine--poly(phosphoribitol) ligase subunit 1; Provisional
Probab=23.99 E-value=2.8e+02 Score=27.93 Aligned_cols=80 Identities=9% Similarity=-0.012 Sum_probs=57.2
Q ss_pred ecchHHHHHHHHHhhhhcccCCCCCCCCCCcEEEEecChhHHHHHHHHHHHHhcCCeEEEec-CCCHHHHHHHHHhcCee
Q 011116 150 LLSHLNVIAIIAGYYHVTEETDPNEGPPPHPVSFFTLPMFHVFGFFMLVRAASKGETLVFME-RFDFEKMLKAVENYRVT 228 (493)
Q Consensus 150 ~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pl~~~~g~~~~~~~l~~G~~~~~~~-~~~~~~~~~~l~~~~~t 228 (493)
.+|..++...+..+...+.. .|..+++++....+.... .....+.++..|+..+..+ ....+.+...++..++.
T Consensus 27 ~~t~~~l~~~~~~~a~~l~~----~g~~~~~~v~~~~~~~~~-~~~~~~a~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~ 101 (503)
T PRK04813 27 KLTYGQLKEDSDALAAFIDS----LKLPDKSPIIVFGHMSPE-MLATFLGAVKAGHAYIPVDVSSPAERIEMIIEVAKPS 101 (503)
T ss_pred EEeHHHHHHHHHHHHHHHHH----hCCCCCCEEEEEcCCCHH-HHHHHHHHHHcCCEEecCCCCChHHHHHHHHHhcCCC
Confidence 47888887766666555533 255788999888875442 3466778888888887664 45678888888988888
Q ss_pred ecccCh
Q 011116 229 YMPVSP 234 (493)
Q Consensus 229 ~l~~~P 234 (493)
+++...
T Consensus 102 ~~~~~~ 107 (503)
T PRK04813 102 LIIATE 107 (503)
T ss_pred EEEecc
Confidence 877653
No 285
>KOG1180 consensus Acyl-CoA synthetase [Lipid transport and metabolism]
Probab=23.74 E-value=8.4e+02 Score=25.36 Aligned_cols=83 Identities=8% Similarity=0.018 Sum_probs=62.2
Q ss_pred CCCCCCcE-EEEecChhHHHHHHHHHHHHhcCCeEEEe-cCCCHHHHHHHHHhcCeeecccChHHHHHHHhcccCCCCCC
Q 011116 174 EGPPPHPV-SFFTLPMFHVFGFFMLVRAASKGETLVFM-ERFDFEKMLKAVENYRVTYMPVSPPLIVAFINSKLTDKYDL 251 (493)
Q Consensus 174 ~~~~~~~~-~~~~~pl~~~~g~~~~~~~l~~G~~~~~~-~~~~~~~~~~~l~~~~~t~l~~~P~~~~~l~~~~~~~~~~l 251 (493)
.|+++.+. +..+.+..+-. +....+|+..+.+++.. +.+.-+.+...+.+.+.+.+++.+.++..|..-. ...
T Consensus 109 lG~k~~e~k~~iFa~TraeW-m~ta~gC~~q~ipvVT~Y~TLGeeal~hsl~Et~~~~i~T~~~LL~kl~~~l----~~~ 183 (678)
T KOG1180|consen 109 LGLKPKETKIAIFAETRAEW-MITAQGCFSQNIPVVTAYATLGEEALIHSLNETESTAIFTDSELLPKLKAPL----KQA 183 (678)
T ss_pred hCCCCCCCeEEEEecchHHH-HHHHHHHHhcCCeEEEEehhcChhhhhhhhccccceEEEeCHHHHHHHHHHH----hcc
Confidence 36676555 77666665532 34677888999999987 5566788999999999999999999998775543 235
Q ss_pred CCeeEEEecC
Q 011116 252 SSLQLLGCGG 261 (493)
Q Consensus 252 ~~lr~v~~~G 261 (493)
+++|.|++--
T Consensus 184 ~~vk~II~~d 193 (678)
T KOG1180|consen 184 KTVKHIIYFD 193 (678)
T ss_pred CceeEEEEec
Confidence 6788888765
No 286
>PRK08246 threonine dehydratase; Provisional
Probab=23.64 E-value=3.3e+02 Score=25.71 Aligned_cols=56 Identities=9% Similarity=0.122 Sum_probs=41.9
Q ss_pred CCCEEEEECCCCCCcHHHHHHHHHHcCCeeccCCCCCCHHHHHHHHhhcCCeEEEEcC
Q 011116 31 RKTTSLTSSPLPPSTSPVLYFSLLSLGVVISPANPLSSTSEVSHQIQLSKPSIAFATS 88 (493)
Q Consensus 31 ~gd~V~l~~~~~~~~~~~~~lA~~~~G~~~v~i~~~~~~~~l~~~l~~~~~~~il~~~ 88 (493)
++++|..-+. +-.-..+-++|...|..+..+-|...++....+++..++++++++.
T Consensus 67 ~~~~vv~aSs--GN~g~a~A~~a~~~G~~~~iv~p~~~~~~k~~~~~~~GA~V~~~~~ 122 (310)
T PRK08246 67 PAAGVVAASG--GNAGLAVAYAAAALGVPATVFVPETAPPAKVARLRALGAEVVVVGA 122 (310)
T ss_pred cCCeEEEeCC--CHHHHHHHHHHHHcCCCEEEEECCCCcHHHHHHHHHCCCEEEEeCC
Confidence 5677655544 6677777778888887776666665666677899999999998875
No 287
>cd00640 Trp-synth-beta_II Tryptophan synthase beta superfamily (fold type II); this family of pyridoxal phosphate (PLP)-dependent enzymes catalyzes beta-replacement and beta-elimination reactions. This CD corresponds to aminocyclopropane-1-carboxylate deaminase (ACCD), tryptophan synthase beta chain (Trp-synth_B), cystathionine beta-synthase (CBS), O-acetylserine sulfhydrylase (CS), serine dehydratase (Ser-dehyd), threonine dehydratase (Thr-dehyd), diaminopropionate ammonia lyase (DAL), and threonine synthase (Thr-synth). ACCD catalyzes the conversion of 1-aminocyclopropane-1-carboxylate to alpha-ketobutyrate and ammonia. Tryptophan synthase folds into a tetramer, where the beta chain is the catalytic PLP-binding subunit and catalyzes the formation of L-tryptophan from indole and L-serine. CBS is a tetrameric hemeprotein that catalyzes condensation of serine and homocysteine to cystathionine. CS is a homodimer that catalyzes the formation of L-cysteine from O-acetyl-L-serine. Ser-dehy
Probab=23.59 E-value=1.8e+02 Score=26.25 Aligned_cols=57 Identities=16% Similarity=0.152 Sum_probs=41.6
Q ss_pred CCCEEEEECCCCCCcHHHHHHHHHHcCCeeccCCCCCCHHHHHHHHhhcCCeEEEEcCC
Q 011116 31 RKTTSLTSSPLPPSTSPVLYFSLLSLGVVISPANPLSSTSEVSHQIQLSKPSIAFATSH 89 (493)
Q Consensus 31 ~gd~V~l~~~~~~~~~~~~~lA~~~~G~~~v~i~~~~~~~~l~~~l~~~~~~~il~~~~ 89 (493)
+++.|+... .+-.-..+-++|...|..++.+-|...+..-...++..+++++.++..
T Consensus 49 ~~~~vv~~s--sGN~g~alA~~a~~~g~~~~v~~p~~~~~~~~~~~~~~Ga~v~~~~~~ 105 (244)
T cd00640 49 PKGVIIEST--GGNTGIALAAAAARLGLKCTIVMPEGASPEKVAQMRALGAEVVLVPGD 105 (244)
T ss_pred CCCEEEEeC--CcHHHHHHHHHHHHcCCCEEEEECCCCCHHHHHHHHHCCCEEEEECCC
Confidence 455555543 456666677777778988777766666777788899999999988765
No 288
>PRK06710 long-chain-fatty-acid--CoA ligase; Validated
Probab=23.20 E-value=3.1e+02 Score=28.25 Aligned_cols=83 Identities=6% Similarity=-0.033 Sum_probs=60.5
Q ss_pred ecchHHHHHHHHHhhhhcccCCCCCCCCCCcEEEEecChhHHHHHHHHHHHHhcCCeEEEe-cCCCHHHHHHHHHhcCee
Q 011116 150 LLSHLNVIAIIAGYYHVTEETDPNEGPPPHPVSFFTLPMFHVFGFFMLVRAASKGETLVFM-ERFDFEKMLKAVENYRVT 228 (493)
Q Consensus 150 ~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pl~~~~g~~~~~~~l~~G~~~~~~-~~~~~~~~~~~l~~~~~t 228 (493)
.+|...+...+..+...+.. .|+.+++++...++-.... ....+.++..|+..+.. +....+++...++..+++
T Consensus 49 ~~ty~eL~~~~~~la~~L~~----~gv~~gd~V~i~~~~~~~~-~~~~lA~~~~G~~~vpi~p~~~~~~l~~~l~~~~~~ 123 (563)
T PRK06710 49 DITFSVFHDKVKRFANYLQK----LGVEKGDRVAIMLPNCPQA-VIGYYGTLLAGGIVVQTNPLYTERELEYQLHDSGAK 123 (563)
T ss_pred eecHHHHHHHHHHHHHHHHH----cCCCCCCEEEEECCCChHH-HHHHHHHHHcCeEEeccCcccCHHHHHHHHhccCCe
Confidence 47888887666666555432 3567889999888875543 45677888888877766 456788999999999999
Q ss_pred ecccChHHH
Q 011116 229 YMPVSPPLI 237 (493)
Q Consensus 229 ~l~~~P~~~ 237 (493)
.++..+...
T Consensus 124 ~ii~~~~~~ 132 (563)
T PRK06710 124 VILCLDLVF 132 (563)
T ss_pred EEEEeccch
Confidence 888776443
No 289
>KOG1250 consensus Threonine/serine dehydratases [Amino acid transport and metabolism]
Probab=23.08 E-value=2e+02 Score=28.02 Aligned_cols=48 Identities=6% Similarity=0.112 Sum_probs=43.2
Q ss_pred CCCcHHHHHHHHHHcCCeeccCCCCCCHHHHHHHHhhcCCeEEEEcCC
Q 011116 42 PPSTSPVLYFSLLSLGVVISPANPLSSTSEVSHQIQLSKPSIAFATSH 89 (493)
Q Consensus 42 ~~~~~~~~~lA~~~~G~~~v~i~~~~~~~~l~~~l~~~~~~~il~~~~ 89 (493)
-+-....+-+|+.++|+.+..+-|...+..-...++..++.+++..++
T Consensus 122 aGNha~a~Ayaa~~LgipaTIVmP~~tp~~kiq~~~nlGA~Vil~G~~ 169 (457)
T KOG1250|consen 122 AGNHAQAAAYAARKLGIPATIVMPVATPLMKIQRCRNLGATVILSGED 169 (457)
T ss_pred CccHHHHHHHHHHhcCCceEEEecCCChHHHHHHHhccCCEEEEeccc
Confidence 577888999999999999888889999999999999999999998764
No 290
>PRK05939 hypothetical protein; Provisional
Probab=22.81 E-value=3.3e+02 Score=26.88 Aligned_cols=55 Identities=18% Similarity=0.236 Sum_probs=25.0
Q ss_pred CCCCCEEEEECCCCCCcHHHHHHHHHHcCCeeccCCCCCCHHHHHHHHhhcCCeEEEE
Q 011116 29 LCRKTTSLTSSPLPPSTSPVLYFSLLSLGVVISPANPLSSTSEVSHQIQLSKPSIAFA 86 (493)
Q Consensus 29 l~~gd~V~l~~~~~~~~~~~~~lA~~~~G~~~v~i~~~~~~~~l~~~l~~~~~~~il~ 86 (493)
+++||.|++.-+ .-......+-++.+.|+.+..++.. ..+++...+. -+.++|+.
T Consensus 83 l~~Gd~Vv~~~~-~y~~t~~~~~~l~~~G~~v~~v~~~-d~e~l~~~l~-~~tklV~v 137 (397)
T PRK05939 83 LRAGDHLVSSQF-LFGNTNSLFGTLRGLGVEVTMVDAT-DVQNVAAAIR-PNTRMVFV 137 (397)
T ss_pred cCCCCEEEECCC-ccccHHHHHHHHHhcCCEEEEECCC-CHHHHHHhCC-CCCeEEEE
Confidence 566666655333 2222222223344556665555432 3455555543 24454444
No 291
>cd01563 Thr-synth_1 Threonine synthase is a pyridoxal phosphate (PLP) dependent enzyme that catalyses the last reaction in the synthesis of threonine from aspartate. It proceeds by converting O-phospho-L-homoserine (OPH) into threonine and inorganic phosphate. In plants, OPH is an intermediate between the methionine and threonine/isoleucine pathways. Thus threonine synthase competes for OPH with cystathionine-gamma-synthase, the first enzyme in the methionine pathway. These enzymes are in general dimers. Members of this CD, Thr-synth_1, are widely distributed in bacteria, archaea and higher plants.
Probab=22.51 E-value=1.6e+02 Score=27.96 Aligned_cols=55 Identities=13% Similarity=-0.037 Sum_probs=39.1
Q ss_pred CCEEEEECCCCCCcHHHHHHHHHHcCCeeccCCCCCCHHHHHHHHhhcCCeEEEEcC
Q 011116 32 KTTSLTSSPLPPSTSPVLYFSLLSLGVVISPANPLSSTSEVSHQIQLSKPSIAFATS 88 (493)
Q Consensus 32 gd~V~l~~~~~~~~~~~~~lA~~~~G~~~v~i~~~~~~~~l~~~l~~~~~~~il~~~ 88 (493)
+++|..... +-.-..+-++|...|..+..+-|...+..-...++..++++++++.
T Consensus 70 ~~~vv~~Ss--GN~g~alA~~a~~~G~~~~ivvp~~~~~~k~~~l~~~GA~Vi~~~~ 124 (324)
T cd01563 70 VKAVACAST--GNTSASLAAYAARAGIKCVVFLPAGKALGKLAQALAYGATVLAVEG 124 (324)
T ss_pred CCEEEEeCC--CHHHHHHHHHHHHcCCceEEEEeCCCCHHHHHHHHHcCCEEEEECC
Confidence 556655544 5555556678888898877665655556667888999999999875
No 292
>KOG0633 consensus Histidinol phosphate aminotransferase [Amino acid transport and metabolism]
Probab=22.01 E-value=52 Score=29.86 Aligned_cols=63 Identities=24% Similarity=0.194 Sum_probs=50.7
Q ss_pred hhCCCCCCCEEEEECCCCCCcHHHHHHHHHHcCCeeccCCCCCC--HHHHHHHHh-hcCCeEEEEcC
Q 011116 25 KRDSLCRKTTSLTSSPLPPSTSPVLYFSLLSLGVVISPANPLSS--TSEVSHQIQ-LSKPSIAFATS 88 (493)
Q Consensus 25 ~~~gl~~gd~V~l~~~~~~~~~~~~~lA~~~~G~~~v~i~~~~~--~~~l~~~l~-~~~~~~il~~~ 88 (493)
.|.-.-||.-=.+.+| +++.++..-.++.-++++-+|++|+++ .+.+.+.++ .+++++++.+.
T Consensus 103 iR~~c~PGkeKIl~cP-PtysMY~v~A~iNd~eVvkvpl~pdF~lnvdai~evl~~ds~iK~~F~tS 168 (375)
T KOG0633|consen 103 IRCVCDPGKEKILDCP-PTYSMYVVDAAINDAEVVKVPLNPDFSLNVDAIAEVLELDSKIKCIFLTS 168 (375)
T ss_pred HhheecCCccceeecC-CcceeEEEEeecCCceEEEecCCCCccccHHHHHHHHhccccceEEEEcC
Confidence 4555668866677888 899999999999999999999999766 677777765 45999998874
No 293
>PRK08180 feruloyl-CoA synthase; Reviewed
Probab=21.73 E-value=3.8e+02 Score=28.17 Aligned_cols=97 Identities=8% Similarity=-0.013 Sum_probs=66.6
Q ss_pred CCCCeEEEEccCCCCCCccceecchHHHHHHHHHhhhhcccCCCCCCCCCCcEEEEecChhHHHHHHHHHHHHhcCCeEE
Q 011116 129 YQSDPAAILYSSGTTGKVKGVLLSHLNVIAIIAGYYHVTEETDPNEGPPPHPVSFFTLPMFHVFGFFMLVRAASKGETLV 208 (493)
Q Consensus 129 ~~~~~~~i~~TSGTTG~pK~v~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pl~~~~g~~~~~~~l~~G~~~~ 208 (493)
.++.++++... ..| ....+|...+...+..+...+.. .|+.+++++...++-...+ ....+.++..|+..+
T Consensus 52 ~p~~~a~~~~~--~~~--~~~~~Ty~el~~~v~~~A~~L~~----~Gv~~gd~Vai~~~n~~e~-~~~~lA~~~~Gav~v 122 (614)
T PRK08180 52 APDRVFLAERG--ADG--GWRRLTYAEALERVRAIAQALLD----RGLSAERPLMILSGNSIEH-ALLALAAMYAGVPYA 122 (614)
T ss_pred CCCCceeeecc--CCC--ceeEeeHHHHHHHHHHHHHHHHH----cCCCCCCEEEEecCCCHHH-HHHHHHHHHcCCeEe
Confidence 45666655421 122 12457888888777776666533 3678999999888765532 356778899999988
Q ss_pred EecC-CC-----HHHHHHHHHhcCeeecccCh
Q 011116 209 FMER-FD-----FEKMLKAVENYRVTYMPVSP 234 (493)
Q Consensus 209 ~~~~-~~-----~~~~~~~l~~~~~t~l~~~P 234 (493)
..+. .. .+++...++..++..+++..
T Consensus 123 pl~~~~~~~~~~~~~l~~~l~~~~~~~li~~~ 154 (614)
T PRK08180 123 PVSPAYSLVSQDFGKLRHVLELLTPGLVFADD 154 (614)
T ss_pred eeccccccccCCHHHHHHHHhcCCCcEEEEcC
Confidence 7753 33 68888899988888887754
No 294
>PRK05620 long-chain-fatty-acid--CoA ligase; Validated
Probab=21.63 E-value=2.3e+02 Score=29.47 Aligned_cols=63 Identities=14% Similarity=0.115 Sum_probs=47.3
Q ss_pred CCCCCCCEEEEECCCCCCcHHHHHHHHHHcCCeeccCCCCCCHHHHHHHHhhcCCeEEEEcCC
Q 011116 27 DSLCRKTTSLTSSPLPPSTSPVLYFSLLSLGVVISPANPLSSTSEVSHQIQLSKPSIAFATSH 89 (493)
Q Consensus 27 ~gl~~gd~V~l~~~~~~~~~~~~~lA~~~~G~~~v~i~~~~~~~~l~~~l~~~~~~~il~~~~ 89 (493)
.++.++|++...+|..+.-.+...++++..|+..+...+..+++.+...+++.++..+...+.
T Consensus 219 ~~~~~~~~~l~~~pl~h~~g~~~~~~~l~~g~~~~~~~~~~~~~~~~~~i~~~~~t~~~~~P~ 281 (576)
T PRK05620 219 LAVTHGESFLCCVPIYHVLSWGVPLAAFMSGTPLVFPGPDLSAPTLAKIIATAMPRVAHGVPT 281 (576)
T ss_pred cCCCCCCeEEEeCChHHhhhhHHHHHHHhcCceEEecCCCCCHHHHHHHHHHhcCceeeecCH
Confidence 578999999988882222223455677778888776666778899999999999998887654
No 295
>cd01448 TST_Repeat_1 Thiosulfate sulfurtransferase (TST), N-terminal, inactive domain. TST contains 2 copies of the Rhodanese Homology Domain; this is the 1st repeat, which does not contain the catalytically active Cys residue. The role of the 1st repeat is uncertain, but it is believed to be involved in protein interaction.
Probab=21.57 E-value=2.4e+02 Score=21.89 Aligned_cols=39 Identities=10% Similarity=0.089 Sum_probs=30.7
Q ss_pred HHHHHHhhCCCCCCCEEEEECCCC-CCcHHHHHHHHHHcCCe
Q 011116 19 LSHALSKRDSLCRKTTSLTSSPLP-PSTSPVLYFSLLSLGVV 59 (493)
Q Consensus 19 lA~~L~~~~gl~~gd~V~l~~~~~-~~~~~~~~lA~~~~G~~ 59 (493)
+...+ ...|+.+++.|.+++. . +.....+...+...|..
T Consensus 67 ~~~~~-~~~~~~~~~~vv~~c~-~g~~~a~~~~~~l~~~G~~ 106 (122)
T cd01448 67 FAELL-GSLGISNDDTVVVYDD-GGGFFAARAWWTLRYFGHE 106 (122)
T ss_pred HHHHH-HHcCCCCCCEEEEECC-CCCccHHHHHHHHHHcCCC
Confidence 45566 6678999999999999 7 47777777888888854
No 296
>PRK06382 threonine dehydratase; Provisional
Probab=21.52 E-value=3e+02 Score=27.25 Aligned_cols=47 Identities=4% Similarity=0.034 Sum_probs=36.9
Q ss_pred CCCcHHHHHHHHHHcCCeeccCCCCCCHHHHHHHHhhcCCeEEEEcC
Q 011116 42 PPSTSPVLYFSLLSLGVVISPANPLSSTSEVSHQIQLSKPSIAFATS 88 (493)
Q Consensus 42 ~~~~~~~~~lA~~~~G~~~v~i~~~~~~~~l~~~l~~~~~~~il~~~ 88 (493)
.+-.-..+-++|...|..+..+-|...+..-...++..++.++++..
T Consensus 81 sGN~g~a~A~aa~~~G~~~~ivmp~~~~~~k~~~~~~~GA~Vv~~~~ 127 (406)
T PRK06382 81 AGNHAQGVAYAASINGIDAKIVMPEYTIPQKVNAVEAYGAHVILTGR 127 (406)
T ss_pred CCHHHHHHHHHHHHcCCCEEEEEcCCCHHHHHHHHHHcCCEEEEECC
Confidence 46666667788889998877777766666667789999999998875
No 297
>PRK08574 cystathionine gamma-synthase; Provisional
Probab=21.47 E-value=3.1e+02 Score=26.90 Aligned_cols=56 Identities=21% Similarity=0.224 Sum_probs=29.1
Q ss_pred CCCCCEEEEECCCCCCcHHHHHHHHHHcCCeeccCCCCCCHHHHHHHHhhcCCeEEEEc
Q 011116 29 LCRKTTSLTSSPLPPSTSPVLYFSLLSLGVVISPANPLSSTSEVSHQIQLSKPSIAFAT 87 (493)
Q Consensus 29 l~~gd~V~l~~~~~~~~~~~~~lA~~~~G~~~v~i~~~~~~~~l~~~l~~~~~~~il~~ 87 (493)
+++||.|++..+ ......-.+-.+...|+.+..++++ .+++...++..+.++|+++
T Consensus 89 l~~GD~Vlv~~~-~y~~~~~~~~~~~~~g~~v~~~~~d--~~~l~~~i~~~~tklV~ie 144 (385)
T PRK08574 89 LKAGDRVVLPME-AYGTTLRLLKSLEKFGVKVVLAYPS--TEDIIEAIKEGRTKLVFIE 144 (385)
T ss_pred hCCCCEEEEcCC-CchhHHHHHHHhhccCcEEEEECCC--HHHHHHhcCccCceEEEEE
Confidence 577887776555 3333322222224456655444432 5566666654456666654
No 298
>COG1205 Distinct helicase family with a unique C-terminal domain including a metal-binding cysteine cluster [General function prediction only]
Probab=21.45 E-value=4.7e+02 Score=28.90 Aligned_cols=83 Identities=10% Similarity=-0.018 Sum_probs=48.9
Q ss_pred CCCcEEEEecChhHHHHH-HH---HHHH-HhcCCeEEEecCCCHHHHHHHHHhcCeeecccChHHHHHHHh-cccCCCCC
Q 011116 177 PPHPVSFFTLPMFHVFGF-FM---LVRA-ASKGETLVFMERFDFEKMLKAVENYRVTYMPVSPPLIVAFIN-SKLTDKYD 250 (493)
Q Consensus 177 ~~~~~~~~~~pl~~~~g~-~~---~~~~-l~~G~~~~~~~~~~~~~~~~~l~~~~~t~l~~~P~~~~~l~~-~~~~~~~~ 250 (493)
++..+.+...|+.-...- .. .+.. +-.+......++-++.+-.+.+.+.+|++++..|.|+..++- .-..-...
T Consensus 113 ~~~a~AL~lYPtnALa~DQ~~rl~~~~~~~~~~v~~~~y~Gdt~~~~r~~~~~~pp~IllTNpdMLh~~llr~~~~~~~~ 192 (851)
T COG1205 113 DPSARALLLYPTNALANDQAERLRELISDLPGKVTFGRYTGDTPPEERRAIIRNPPDILLTNPDMLHYLLLRNHDAWLWL 192 (851)
T ss_pred CcCccEEEEechhhhHhhHHHHHHHHHHhCCCcceeeeecCCCChHHHHHHHhCCCCEEEeCHHHHHHHhccCcchHHHH
Confidence 345567777777443332 22 2221 111334444455455666668899999999999999988443 33222333
Q ss_pred CCCeeEEEe
Q 011116 251 LSSLQLLGC 259 (493)
Q Consensus 251 l~~lr~v~~ 259 (493)
++.+|++++
T Consensus 193 ~~~Lk~lVv 201 (851)
T COG1205 193 LRNLKYLVV 201 (851)
T ss_pred HhcCcEEEE
Confidence 566888776
No 299
>PRK07048 serine/threonine dehydratase; Validated
Probab=21.23 E-value=3e+02 Score=26.17 Aligned_cols=48 Identities=8% Similarity=0.011 Sum_probs=38.2
Q ss_pred CCCcHHHHHHHHHHcCCeeccCCCCCCHHHHHHHHhhcCCeEEEEcCC
Q 011116 42 PPSTSPVLYFSLLSLGVVISPANPLSSTSEVSHQIQLSKPSIAFATSH 89 (493)
Q Consensus 42 ~~~~~~~~~lA~~~~G~~~v~i~~~~~~~~l~~~l~~~~~~~il~~~~ 89 (493)
.+-.-..+-++|...|..++.+-|...++.-...++..++++++++..
T Consensus 80 sGN~g~alA~~a~~~G~~~~vvvp~~~~~~k~~~~~~~GAeV~~~~~~ 127 (321)
T PRK07048 80 SGNHAQAIALSARLLGIPATIVMPQDAPAAKVAATRGYGGEVVTYDRY 127 (321)
T ss_pred CCHHHHHHHHHHHHcCCCEEEEECCCCCHHHHHHHHHCCCEEEEECCC
Confidence 577777788888899988776666666667788999999999999853
No 300
>TIGR03205 pimA dicarboxylate--CoA ligase PimA. PimA, a member of a large family of acyl-CoA ligases, is found in a characteristic operon pimFABCDE for the metabolism of pimelate and related compounds. It is found, so far, in Bradyrhizobium japonicum and several strains of Rhodopseudomonas palustris. PimA from R. palustris was shown to be active as a CoA ligase for C(7) to C(14) dicarboxylates and fatty acids.
Probab=21.14 E-value=3.9e+02 Score=27.40 Aligned_cols=80 Identities=9% Similarity=-0.051 Sum_probs=57.6
Q ss_pred ecchHHHHHHHHHhhhhcccCCCCCCCCCCcEEEEecChhHHHHHHHHHHHHhcCCeEEEe-cCCCHHHHHHHHHhcCee
Q 011116 150 LLSHLNVIAIIAGYYHVTEETDPNEGPPPHPVSFFTLPMFHVFGFFMLVRAASKGETLVFM-ERFDFEKMLKAVENYRVT 228 (493)
Q Consensus 150 ~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pl~~~~g~~~~~~~l~~G~~~~~~-~~~~~~~~~~~l~~~~~t 228 (493)
.+|...+......+...+.. .|+.+++++...++.... ....++.++..|+..+.. +.....++...++..++.
T Consensus 46 ~~ty~el~~~~~~~a~~L~~----~gi~~g~~V~i~~~~~~~-~~~~~la~~~~G~~~v~l~~~~~~~~l~~~i~~~~~~ 120 (541)
T TIGR03205 46 PITYTELEAMAETAAAALLR----AGYGKDASVALYLGNTPD-HPINFFGALKAGARVVHLSPLDGERALSHKLSDSGAR 120 (541)
T ss_pred EeeHHHHHHHHHHHHHHHHH----cCCCCCCEEEEECCCChH-HHHHHHHHHhcCeEEEecCCCCCHHHHHHHHhhcCce
Confidence 47777776666655555432 356899999988885442 235677788888888866 446788999999999999
Q ss_pred ecccCh
Q 011116 229 YMPVSP 234 (493)
Q Consensus 229 ~l~~~P 234 (493)
.+++..
T Consensus 121 ~vi~~~ 126 (541)
T TIGR03205 121 LLITSD 126 (541)
T ss_pred EEEEeC
Confidence 887653
No 301
>PRK09192 acyl-CoA synthetase; Validated
Probab=20.65 E-value=5.8e+02 Score=26.46 Aligned_cols=87 Identities=8% Similarity=-0.123 Sum_probs=61.3
Q ss_pred eecchHHHHHHHHHhhhhcccCCCCCCCCCCcEEEEecChhHHHHHHHHHHHHhcCCeEEEecC-C-------CHHHHHH
Q 011116 149 VLLSHLNVIAIIAGYYHVTEETDPNEGPPPHPVSFFTLPMFHVFGFFMLVRAASKGETLVFMER-F-------DFEKMLK 220 (493)
Q Consensus 149 v~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pl~~~~g~~~~~~~l~~G~~~~~~~~-~-------~~~~~~~ 220 (493)
-.+|...+...+..+...+.. .|+.+++++...++.... .....+.++..|+..+..+. . ..+++..
T Consensus 48 ~~~Ty~eL~~~~~~~a~~L~~----~gi~~gd~V~l~~~n~~~-~~~~~lA~~~~G~~~v~i~~~~~~~~~~~~~~~l~~ 122 (579)
T PRK09192 48 EALPYQTLRARAEAGARRLLA----LGLKPGDRVALIAETDGD-FVEAFFACQYAGLVPVPLPLPMGFGGRESYIAQLRG 122 (579)
T ss_pred EEecHHHHHHHHHHHHHHHHH----hCCCCCCEEEEEcCCchh-HHHHHHHHHHcCCeeEeccCCcccccchHHHHHHHH
Confidence 457888887666665555432 366899999988887443 33567788889998887742 1 1578999
Q ss_pred HHHhcCeeecccChHHHHHH
Q 011116 221 AVENYRVTYMPVSPPLIVAF 240 (493)
Q Consensus 221 ~l~~~~~t~l~~~P~~~~~l 240 (493)
.++..++..++........+
T Consensus 123 ~i~~~~~~~il~~~~~~~~~ 142 (579)
T PRK09192 123 MLASAQPAAIITPDELLPWV 142 (579)
T ss_pred HHHhcCCCEEEeChHHHHHH
Confidence 99999999988876654433
No 302
>cd00615 Orn_deC_like Ornithine decarboxylase family. This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The major groups in this CD corresponds to ornithine decarboxylase (ODC), arginine decarboxylase (ADC) and lysine decarboxylase (LDC). ODC is a dodecamer composed of six homodimers and catalyzes the decarboxylation of tryptophan. ADC catalyzes the decarboxylation of arginine and LDC catalyzes the decarboxylation of lysine. Members of this family are widely found in all three forms of life.
Probab=20.54 E-value=4.1e+02 Score=24.68 Aligned_cols=55 Identities=13% Similarity=-0.008 Sum_probs=36.1
Q ss_pred CCCCCEEEEECCCCCCcHHHHHHHHHHcCCeeccCCC----------CCCHHHHHHHHhh-cCCeEEEEc
Q 011116 29 LCRKTTSLTSSPLPPSTSPVLYFSLLSLGVVISPANP----------LSSTSEVSHQIQL-SKPSIAFAT 87 (493)
Q Consensus 29 l~~gd~V~l~~~~~~~~~~~~~lA~~~~G~~~v~i~~----------~~~~~~l~~~l~~-~~~~~il~~ 87 (493)
+++||+|.+--+ .. ...+-++...|+.++.+.+ ..+.+.+...++. .++++++.+
T Consensus 96 ~~~gd~Vlv~~~-~h---~s~~~~~~~~g~~~~~v~~~~~~~~~~~~~i~~~~l~~~l~~~~~~k~v~l~ 161 (294)
T cd00615 96 CGPGDKILIDRN-CH---KSVINGLVLSGAVPVYLKPERNPYYGIAGGIPPETFKKALIEHPDAKAAVIT 161 (294)
T ss_pred CCCCCEEEEeCC-ch---HHHHHHHHHCCCEEEEecCccCcccCcCCCCCHHHHHHHHHhCCCceEEEEE
Confidence 589999887655 32 3334556677887665543 3567888888865 467766555
No 303
>PRK09275 aspartate aminotransferase; Provisional
Probab=20.54 E-value=2.6e+02 Score=28.86 Aligned_cols=58 Identities=14% Similarity=0.025 Sum_probs=34.4
Q ss_pred CCCCCEEEEECCCCCCcHHHHHHHHHHcCCeeccCCC------CCCHHHHHHHHhhcCCeEEE-EcCC
Q 011116 29 LCRKTTSLTSSPLPPSTSPVLYFSLLSLGVVISPANP------LSSTSEVSHQIQLSKPSIAF-ATSH 89 (493)
Q Consensus 29 l~~gd~V~l~~~~~~~~~~~~~lA~~~~G~~~v~i~~------~~~~~~l~~~l~~~~~~~il-~~~~ 89 (493)
+.+||.|++..| ++..+.........|+.+++++. ....+++...+. .++++++ ++++
T Consensus 187 l~pGD~Vlv~~P--~y~~Y~~~~~l~g~~~~~v~v~~~~~~~f~~d~~~l~~~~~-~~tkai~l~nP~ 251 (527)
T PRK09275 187 LKAGDKIALMTP--IFTPYLEIPELPRYDLEVVHINADEENEWQYPDSELEKLRD-PSIKALFLVNPS 251 (527)
T ss_pred CCCCCEEEEeCC--ChHHHHHHHHHcCCCeEEEEeecCcccCCCCCHHHHHhhcC-CCCCEEEEeCCc
Confidence 688999888887 55555555555555676666642 234566665443 3556555 4443
No 304
>TIGR01734 D-ala-DACP-lig D-alanine--poly(phosphoribitol) ligase, subunit 1. This model represents the enzyme (also called D-alanine-D-alanyl carrier protein ligase) which activates D-alanine as an adenylate via the reaction D-ala + ATP - D-ala-AMP + PPi, and further catalyzes the condensation of the amino acid adenylate with the D-alanyl carrier protein (D-ala-ACP). The D-alanine is then further transferred to teichoic acid in the biosynthesis of lipoteichoic acid (LTA) and wall teichoic acid (WTA) in gram positive bacteria, both polysacchatides.
Probab=20.45 E-value=4e+02 Score=26.81 Aligned_cols=70 Identities=10% Similarity=0.042 Sum_probs=50.8
Q ss_pred HHHHhhCCCCCCCEEEEECCCCCCcHHHHHHHHHHcCCeeccCCCC--CCHHHHHHHHhhcCCeEEEEcCCC
Q 011116 21 HALSKRDSLCRKTTSLTSSPLPPSTSPVLYFSLLSLGVVISPANPL--SSTSEVSHQIQLSKPSIAFATSHT 90 (493)
Q Consensus 21 ~~L~~~~gl~~gd~V~l~~~~~~~~~~~~~lA~~~~G~~~v~i~~~--~~~~~l~~~l~~~~~~~il~~~~~ 90 (493)
.++....++..+|++....+.+....+..+++++..|+..+..++. .....+...+...++..+...+..
T Consensus 171 ~~~~~~~~~~~~~~~l~~~p~~~~~~~~~~~~~l~~G~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~p~~ 242 (502)
T TIGR01734 171 NWMLADFPLSEGKQFLNQAPFSFDLSVMDLYPCLASGGTLHCLDKDITNNFKLLFEELPKTGLNVWVSTPSF 242 (502)
T ss_pred HHHHHhCCCCCCceEEeecCceechhHHHHHHHHHCCCEEEEcCHHHhcCHHHHHHHHHHcCCeEEEEChhH
Confidence 3443557889999988887722333455677889999998877653 356778888899999888887654
No 305
>KOG0024 consensus Sorbitol dehydrogenase [Secondary metabolites biosynthesis, transport and catabolism]
Probab=20.43 E-value=2.8e+02 Score=26.35 Aligned_cols=61 Identities=8% Similarity=0.033 Sum_probs=45.6
Q ss_pred hhCCCCCCCEEEEECCCCCCcHHHHHHHHHHcCCeeccCCCCCCHHHHHHHHhhcCCeEEEEcCC
Q 011116 25 KRDSLCRKTTSLTSSPLPPSTSPVLYFSLLSLGVVISPANPLSSTSEVSHQIQLSKPSIAFATSH 89 (493)
Q Consensus 25 ~~~gl~~gd~V~l~~~~~~~~~~~~~lA~~~~G~~~v~i~~~~~~~~l~~~l~~~~~~~il~~~~ 89 (493)
++.++++|++|+++.. ++-=+++.+++-..|+.=+.+. +....+| .+.++.+++.+.-+..
T Consensus 163 r~~~vk~Gs~vLV~GA--GPIGl~t~l~Aka~GA~~VVi~-d~~~~Rl-e~Ak~~Ga~~~~~~~~ 223 (354)
T KOG0024|consen 163 RRAGVKKGSKVLVLGA--GPIGLLTGLVAKAMGASDVVIT-DLVANRL-ELAKKFGATVTDPSSH 223 (354)
T ss_pred hhcCcccCCeEEEECC--cHHHHHHHHHHHHcCCCcEEEe-ecCHHHH-HHHHHhCCeEEeeccc
Confidence 3468999999999998 8888899999999998855442 4444444 4555599888876543
Done!