Query 011117
Match_columns 493
No_of_seqs 69 out of 71
Neff 2.5
Searched_HMMs 29240
Date Mon Mar 25 21:09:59 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/011117.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/011117hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3vk6_A E3 ubiquitin-protein li 100.0 2.8E-36 9.5E-41 257.1 2.1 82 69-151 1-88 (101)
2 3hct_A TNF receptor-associated 98.6 7.6E-09 2.6E-13 85.6 0.2 81 69-151 18-110 (118)
3 1chc_A Equine herpes virus-1 r 98.6 1.2E-08 4E-13 75.9 0.8 51 67-117 3-57 (68)
4 3knv_A TNF receptor-associated 98.5 1.4E-08 4.8E-13 88.0 0.7 81 68-151 30-133 (141)
5 2djb_A Polycomb group ring fin 98.4 4.5E-08 1.5E-12 74.3 1.6 47 68-114 14-64 (72)
6 2ckl_B Ubiquitin ligase protei 98.4 5.8E-08 2E-12 84.1 1.3 49 68-116 53-106 (165)
7 2yur_A Retinoblastoma-binding 98.4 8.7E-08 3E-12 73.4 1.3 49 68-117 14-69 (74)
8 2ecn_A Ring finger protein 141 98.4 1.2E-07 4E-12 71.0 2.0 47 68-116 14-64 (70)
9 1rmd_A RAG1; V(D)J recombinati 98.4 6.2E-08 2.1E-12 79.3 0.5 77 69-147 23-112 (116)
10 2d8t_A Dactylidin, ring finger 98.3 1E-07 3.5E-12 72.1 1.2 46 68-114 14-63 (71)
11 2ckl_A Polycomb group ring fin 98.3 1.3E-07 4.4E-12 76.7 1.8 46 68-113 14-63 (108)
12 2ep4_A Ring finger protein 24; 98.3 1.2E-07 4.3E-12 71.6 1.1 49 69-117 15-69 (74)
13 2y43_A E3 ubiquitin-protein li 98.3 1.3E-07 4.3E-12 75.5 1.0 45 68-112 21-69 (99)
14 2ect_A Ring finger protein 126 98.3 1.4E-07 4.7E-12 72.0 1.2 47 68-114 14-66 (78)
15 2ea6_A Ring finger protein 4; 98.3 1.2E-07 4.3E-12 69.7 0.7 45 67-111 13-67 (69)
16 2ysl_A Tripartite motif-contai 98.3 1.9E-07 6.3E-12 70.1 1.6 43 68-111 19-68 (73)
17 3ng2_A RNF4, snurf, ring finge 98.3 1.3E-07 4.4E-12 70.4 0.4 47 67-113 8-64 (71)
18 1bor_A Transcription factor PM 98.3 2.5E-07 8.7E-12 68.1 2.0 43 68-111 5-48 (56)
19 2csy_A Zinc finger protein 183 98.3 1.8E-07 6E-12 72.2 1.2 43 68-111 14-60 (81)
20 2egp_A Tripartite motif-contai 98.3 2.1E-07 7.2E-12 70.5 1.5 44 68-112 11-65 (79)
21 3lrq_A E3 ubiquitin-protein li 98.3 1.8E-07 6.2E-12 75.7 1.3 44 68-111 21-69 (100)
22 2ecy_A TNF receptor-associated 98.3 2.4E-07 8.3E-12 69.0 1.7 44 68-112 14-62 (66)
23 2ecw_A Tripartite motif-contai 98.2 2.2E-07 7.4E-12 70.5 1.4 44 68-112 18-71 (85)
24 2ecv_A Tripartite motif-contai 98.2 2.4E-07 8.4E-12 70.2 1.6 44 68-112 18-71 (85)
25 2kiz_A E3 ubiquitin-protein li 98.2 2.3E-07 7.8E-12 69.3 1.0 45 68-112 13-63 (69)
26 3fl2_A E3 ubiquitin-protein li 98.2 3.1E-07 1E-11 76.2 1.7 45 69-114 52-101 (124)
27 2ecg_A Baculoviral IAP repeat- 98.2 1.6E-07 5.3E-12 72.5 -0.3 48 68-116 24-72 (75)
28 4ap4_A E3 ubiquitin ligase RNF 98.2 2.6E-07 8.8E-12 74.9 1.0 67 67-135 5-83 (133)
29 2xeu_A Ring finger protein 4; 98.2 2.8E-07 9.7E-12 66.9 1.1 46 69-114 3-58 (64)
30 3l11_A E3 ubiquitin-protein li 98.2 2.8E-07 9.4E-12 75.3 0.8 46 67-113 13-63 (115)
31 2ecm_A Ring finger and CHY zin 98.2 3.7E-07 1.3E-11 65.1 1.2 44 68-111 4-54 (55)
32 3hcs_A TNF receptor-associated 98.2 3.4E-07 1.2E-11 79.4 1.2 77 68-147 17-106 (170)
33 1x4j_A Ring finger protein 38; 98.2 2.8E-07 9.6E-12 70.2 0.5 44 68-111 22-71 (75)
34 3ztg_A E3 ubiquitin-protein li 98.2 4E-07 1.4E-11 71.4 1.1 46 68-114 12-64 (92)
35 2ea5_A Cell growth regulator w 98.1 4.9E-07 1.7E-11 69.9 1.3 54 64-118 10-64 (68)
36 1t1h_A Gspef-atpub14, armadill 98.1 4.8E-07 1.7E-11 69.0 1.3 43 68-111 7-54 (78)
37 4ayc_A E3 ubiquitin-protein li 98.1 4.2E-07 1.4E-11 77.2 0.8 43 69-112 53-99 (138)
38 2ct2_A Tripartite motif protei 98.1 5.1E-07 1.8E-11 69.4 0.9 44 68-111 14-67 (88)
39 2ysj_A Tripartite motif-contai 98.1 1.3E-06 4.4E-11 64.3 2.8 39 67-106 18-63 (63)
40 1z6u_A NP95-like ring finger p 98.1 8.4E-07 2.9E-11 77.4 1.8 44 69-113 78-126 (150)
41 1jm7_B BARD1, BRCA1-associated 98.1 8.5E-07 2.9E-11 73.2 1.7 44 68-111 21-66 (117)
42 1iym_A EL5; ring-H2 finger, ub 98.1 1.1E-06 3.6E-11 62.9 1.7 43 68-110 4-53 (55)
43 2l0b_A E3 ubiquitin-protein li 98.0 8.7E-07 3E-11 70.6 1.0 45 67-111 38-88 (91)
44 1jm7_A BRCA1, breast cancer ty 98.0 1.3E-06 4.3E-11 70.2 1.6 43 69-112 21-70 (112)
45 1v87_A Deltex protein 2; ring- 98.0 8.9E-07 3E-11 71.8 0.8 52 69-120 25-102 (114)
46 1g25_A CDK-activating kinase a 98.0 1.2E-06 4.2E-11 65.0 1.0 44 69-112 3-55 (65)
47 4ic3_A E3 ubiquitin-protein li 98.0 1.2E-06 4E-11 67.8 0.8 47 69-116 24-71 (74)
48 2ecj_A Tripartite motif-contai 98.0 4.1E-06 1.4E-10 60.0 3.1 38 68-106 14-58 (58)
49 2vje_B MDM4 protein; proto-onc 97.9 3.3E-06 1.1E-10 63.9 1.3 48 68-116 6-60 (63)
50 2vje_A E3 ubiquitin-protein li 97.9 3.4E-06 1.2E-10 64.0 1.2 48 68-116 7-61 (64)
51 1e4u_A Transcriptional repress 97.8 6.3E-06 2.1E-10 65.6 2.1 46 67-112 9-62 (78)
52 2yho_A E3 ubiquitin-protein li 97.8 4.2E-06 1.4E-10 66.1 1.0 48 69-117 18-66 (79)
53 4ap4_A E3 ubiquitin ligase RNF 97.7 6.3E-06 2.2E-10 66.7 0.8 50 64-113 67-126 (133)
54 2ecl_A Ring-box protein 2; RNF 97.7 1E-05 3.5E-10 63.5 1.1 44 69-112 15-76 (81)
55 2c2l_A CHIP, carboxy terminus 97.6 1.9E-05 6.5E-10 71.0 2.3 42 69-111 208-254 (281)
56 2y1n_A E3 ubiquitin-protein li 97.6 1.6E-05 5.6E-10 80.4 1.8 48 69-117 332-384 (389)
57 3t6p_A Baculoviral IAP repeat- 97.5 1.8E-05 6.3E-10 78.1 1.1 47 69-116 295-342 (345)
58 1wgm_A Ubiquitin conjugation f 97.5 2E-05 7E-10 64.7 0.6 43 68-111 21-68 (98)
59 3dpl_R Ring-box protein 1; ubi 97.4 3.5E-05 1.2E-09 64.6 1.5 42 69-110 37-99 (106)
60 2kr4_A Ubiquitin conjugation f 97.4 2.9E-05 9.8E-10 61.8 0.9 43 68-111 13-59 (85)
61 2yu4_A E3 SUMO-protein ligase 97.4 2.2E-05 7.6E-10 63.2 -0.1 31 68-98 6-36 (94)
62 2kre_A Ubiquitin conjugation f 97.4 3.7E-05 1.3E-09 63.4 1.1 42 69-111 29-74 (100)
63 2f42_A STIP1 homology and U-bo 97.2 0.00012 4.2E-09 67.0 2.6 43 68-111 105-152 (179)
64 3htk_C E3 SUMO-protein ligase 97.1 9.3E-05 3.2E-09 72.1 1.2 42 69-110 181-230 (267)
65 4a0k_B E3 ubiquitin-protein li 97.1 7.7E-05 2.6E-09 64.1 0.0 43 69-111 48-111 (117)
66 1wim_A KIAA0161 protein; ring 96.8 0.00031 1.1E-08 55.8 1.1 31 68-98 4-36 (94)
67 2csh_A Zinc finger protein 297 96.7 0.00036 1.2E-08 54.2 0.5 81 65-151 6-92 (110)
68 2yt9_A Zinc finger-containing 96.3 0.00041 1.4E-08 52.2 -1.0 80 66-150 4-91 (95)
69 2bay_A PRE-mRNA splicing facto 96.2 0.0008 2.7E-08 51.3 0.3 46 69-114 3-52 (61)
70 2dmd_A Zinc finger protein 64, 96.1 0.0014 4.6E-08 49.4 0.7 79 66-149 5-89 (96)
71 3uk3_C Zinc finger protein 217 96.0 0.0027 9.2E-08 43.7 1.9 32 116-149 26-57 (57)
72 2d8s_A Cellular modulator of i 95.9 0.0028 9.7E-08 50.7 1.9 51 68-118 14-76 (80)
73 2lv2_A Insulinoma-associated p 95.8 0.0035 1.2E-07 50.0 2.1 58 66-150 25-82 (85)
74 1wjp_A Zinc finger protein 295 95.8 0.00075 2.6E-08 52.4 -1.8 80 64-151 11-96 (107)
75 2d9h_A Zinc finger protein 692 95.7 0.0042 1.4E-07 45.6 2.1 60 66-152 4-66 (78)
76 2dmi_A Teashirt homolog 3; zin 95.7 0.0013 4.4E-08 51.4 -0.9 84 64-151 14-107 (115)
77 2dlq_A GLI-kruppel family memb 95.6 0.0014 4.7E-08 51.0 -1.0 82 65-150 31-120 (124)
78 1x5w_A Zinc finger protein 64, 95.6 0.0066 2.3E-07 43.8 2.7 59 66-151 6-64 (70)
79 1ubd_C Protein (YY1 zinc finge 95.5 0.0033 1.1E-07 49.3 1.0 31 116-146 56-86 (124)
80 2lt7_A Transcriptional regulat 95.3 0.0026 8.9E-08 53.6 -0.2 81 65-150 18-104 (133)
81 2ee8_A Protein ODD-skipped-rel 95.1 0.0034 1.2E-07 48.2 -0.1 78 65-148 13-97 (106)
82 1x6e_A Zinc finger protein 24; 95.1 0.011 3.7E-07 43.0 2.5 59 63-148 8-66 (72)
83 2dlq_A GLI-kruppel family memb 95.1 0.004 1.4E-07 48.4 0.1 78 66-148 4-90 (124)
84 2cot_A Zinc finger protein 435 95.0 0.011 3.9E-07 43.3 2.3 58 62-146 11-68 (77)
85 2rpc_A Zinc finger protein ZIC 95.0 0.0068 2.3E-07 49.5 1.2 30 116-145 84-113 (155)
86 2drp_A Protein (tramtrack DNA- 94.8 0.012 4.2E-07 41.6 2.1 58 65-149 6-65 (66)
87 2ct1_A Transcriptional repress 94.6 0.016 5.5E-07 42.5 2.2 63 63-151 9-72 (77)
88 2adr_A ADR1; transcription reg 94.5 0.018 6.3E-07 40.0 2.3 34 116-151 24-57 (60)
89 1a1h_A QGSR zinc finger peptid 94.4 0.0083 2.8E-07 44.4 0.3 76 66-146 1-84 (90)
90 2gli_A Protein (five-finger GL 94.1 0.011 3.9E-07 47.8 0.7 34 116-149 91-124 (155)
91 1ubd_C Protein (YY1 zinc finge 94.1 0.0054 1.8E-07 48.1 -1.2 79 66-147 31-117 (124)
92 2gqj_A Zinc finger protein KIA 94.1 0.006 2E-07 47.5 -1.0 62 63-151 18-81 (98)
93 2lce_A B-cell lymphoma 6 prote 94.1 0.026 8.9E-07 41.0 2.5 55 65-146 13-67 (74)
94 2gli_A Protein (five-finger GL 94.0 0.016 5.5E-07 46.9 1.3 82 64-148 62-154 (155)
95 4gzn_C ZFP-57, zinc finger pro 93.9 0.022 7.7E-07 42.6 1.9 55 67-149 2-56 (60)
96 1x3c_A Zinc finger protein 292 93.9 0.02 6.9E-07 46.8 1.7 46 119-164 24-70 (73)
97 2epa_A Krueppel-like factor 10 93.7 0.025 8.5E-07 40.8 1.8 31 115-145 40-70 (72)
98 2jp9_A Wilms tumor 1; DNA bind 93.6 0.014 4.9E-07 45.0 0.3 30 116-145 88-117 (119)
99 2dlk_A Novel protein; ZF-C2H2 93.3 0.049 1.7E-06 39.5 2.8 31 116-146 32-62 (79)
100 2kmk_A Zinc finger protein GFI 93.3 0.016 5.4E-07 42.0 0.1 72 70-146 2-79 (82)
101 1llm_C Chimera of ZIF23-GCN4; 93.2 0.035 1.2E-06 41.6 1.9 79 67-151 1-85 (88)
102 2ctd_A Zinc finger protein 512 92.5 0.031 1.1E-06 44.3 0.8 61 63-151 28-89 (96)
103 2ct0_A Non-SMC element 1 homol 92.1 0.063 2.2E-06 42.9 2.1 49 63-111 9-63 (74)
104 2rpc_A Zinc finger protein ZIC 92.0 0.025 8.5E-07 46.1 -0.3 76 70-148 63-146 (155)
105 1tf6_A Protein (transcription 91.7 0.033 1.1E-06 47.0 0.1 21 65-85 38-60 (190)
106 2i13_A AART; DNA binding, zinc 91.6 0.03 1E-06 47.3 -0.3 30 117-148 100-129 (190)
107 1tf6_A Protein (transcription 91.6 0.063 2.1E-06 45.3 1.6 83 64-149 7-99 (190)
108 2i13_A AART; DNA binding, zinc 91.5 0.03 1E-06 47.2 -0.4 44 101-146 106-155 (190)
109 1x6h_A Transcriptional repress 91.1 0.14 4.8E-06 37.4 2.9 65 64-151 10-74 (86)
110 2jp9_A Wilms tumor 1; DNA bind 91.1 0.11 3.8E-06 40.0 2.5 78 66-148 3-90 (119)
111 2ebt_A Krueppel-like factor 5; 90.7 0.12 4.2E-06 38.7 2.4 77 64-145 10-96 (100)
112 2j7j_A Transcription factor II 90.4 0.11 3.9E-06 37.5 1.8 26 123-148 59-85 (85)
113 1bhi_A CRE-BP1, ATF-2; CRE bin 90.3 0.12 4.3E-06 32.7 1.8 28 119-146 3-30 (38)
114 1va1_A Transcription factor SP 90.2 0.12 4E-06 33.1 1.6 28 119-146 5-32 (37)
115 2drp_A Protein (tramtrack DNA- 89.9 0.13 4.6E-06 36.2 1.9 35 113-149 1-35 (66)
116 2dlk_A Novel protein; ZF-C2H2 89.8 0.14 4.7E-06 37.1 1.9 31 120-150 5-35 (79)
117 1bbo_A Human enhancer-binding 89.6 0.14 4.9E-06 34.9 1.8 32 115-148 22-53 (57)
118 2wbs_A Krueppel-like factor 4; 89.5 0.2 7E-06 36.7 2.7 74 67-145 3-86 (89)
119 2ab3_A ZNF29; zinc finger prot 89.1 0.19 6.5E-06 29.3 1.8 25 122-146 2-26 (29)
120 2ghf_A ZHX1, zinc fingers and 89.0 0.19 6.6E-06 41.1 2.4 60 65-150 14-76 (102)
121 2j7j_A Transcription factor II 88.7 0.14 4.6E-06 37.1 1.2 35 115-149 24-58 (85)
122 2wbt_A B-129; zinc finger; 2.7 88.7 0.1 3.4E-06 41.5 0.5 29 120-150 98-126 (129)
123 1sp2_A SP1F2; zinc finger, tra 88.0 0.12 4.1E-06 31.3 0.4 24 123-146 3-26 (31)
124 3iuf_A Zinc finger protein UBI 87.8 0.22 7.4E-06 34.1 1.7 32 117-150 2-33 (48)
125 1f2i_G Fusion of N-terminal 17 87.5 0.23 7.8E-06 35.6 1.7 25 119-145 46-70 (73)
126 2ent_A Krueppel-like factor 15 87.5 0.22 7.4E-06 33.0 1.5 31 116-146 6-36 (48)
127 1f2i_G Fusion of N-terminal 17 86.8 0.28 9.6E-06 35.2 1.9 34 113-146 10-43 (73)
128 1ncs_A Peptide M30F, transcrip 86.3 0.25 8.5E-06 33.5 1.3 30 117-146 13-42 (47)
129 2eln_A Zinc finger protein 406 86.1 0.3 1E-05 33.7 1.6 27 119-145 6-32 (38)
130 2elm_A Zinc finger protein 406 85.7 0.43 1.5E-05 30.4 2.1 33 116-150 3-35 (37)
131 1zfd_A SWI5; DNA binding motif 85.4 0.2 6.7E-06 30.4 0.4 25 122-146 3-27 (32)
132 2epa_A Krueppel-like factor 10 85.2 0.37 1.3E-05 34.6 1.8 29 118-146 13-41 (72)
133 3i2d_A E3 SUMO-protein ligase 84.3 0.35 1.2E-05 49.2 1.8 50 69-125 249-306 (371)
134 2ct1_A Transcriptional repress 84.1 0.39 1.3E-05 35.0 1.6 34 115-150 8-41 (77)
135 2eod_A TNF receptor-associated 84.0 0.28 9.7E-06 35.1 0.8 26 119-145 33-58 (66)
136 1z60_A TFIIH basal transcripti 83.4 0.57 2E-05 36.6 2.3 37 71-107 17-59 (59)
137 2jun_A Midline-1; B-BOX, TRIM, 83.3 0.44 1.5E-05 37.8 1.7 29 70-98 4-34 (101)
138 2ebt_A Krueppel-like factor 5; 83.2 0.46 1.6E-05 35.5 1.7 30 116-145 39-68 (100)
139 2elo_A Zinc finger protein 406 82.8 0.5 1.7E-05 29.5 1.5 29 116-146 3-31 (37)
140 2ctu_A Zinc finger protein 483 82.4 0.11 3.7E-06 36.7 -2.0 48 65-146 14-61 (73)
141 3nw0_A Non-structural maintena 82.1 0.64 2.2E-05 43.8 2.5 46 65-110 176-227 (238)
142 2elx_A Zinc finger protein 406 82.0 0.59 2E-05 28.6 1.5 26 119-146 4-29 (35)
143 2dmd_A Zinc finger protein 64, 81.8 0.71 2.4E-05 34.3 2.2 46 101-148 9-60 (96)
144 1srk_A Zinc finger protein ZFP 81.4 0.8 2.7E-05 28.2 2.0 26 119-146 4-29 (35)
145 2yt9_A Zinc finger-containing 81.2 0.48 1.6E-05 35.2 1.1 48 101-150 8-61 (95)
146 2wbs_A Krueppel-like factor 4; 80.9 0.6 2E-05 34.2 1.5 33 114-146 27-59 (89)
147 2epx_A Zinc finger protein 28 80.7 0.42 1.4E-05 31.4 0.6 33 116-150 6-38 (47)
148 2en6_A Zinc finger protein 268 80.2 0.81 2.8E-05 30.1 1.8 32 115-149 5-36 (46)
149 2emi_A Zinc finger protein 484 80.2 0.71 2.4E-05 30.4 1.5 32 115-149 5-36 (46)
150 2epu_A Zinc finger protein 32; 80.0 0.77 2.6E-05 30.1 1.7 29 116-146 6-34 (45)
151 1a1h_A QGSR zinc finger peptid 79.8 0.67 2.3E-05 34.0 1.4 29 116-146 28-56 (90)
152 2epc_A Zinc finger protein 32; 79.3 0.76 2.6E-05 29.4 1.5 29 116-146 5-33 (42)
153 2m0d_A Zinc finger and BTB dom 79.1 0.85 2.9E-05 26.4 1.5 24 121-146 2-25 (30)
154 2fiy_A Protein FDHE homolog; F 79.0 0.7 2.4E-05 45.4 1.7 59 67-126 180-257 (309)
155 2em3_A Zinc finger protein 28 78.6 0.81 2.8E-05 30.1 1.4 31 116-149 6-36 (46)
156 2eox_A Zinc finger protein 473 78.5 0.77 2.6E-05 29.9 1.3 30 115-146 5-34 (44)
157 2elq_A Zinc finger protein 406 78.0 0.85 2.9E-05 28.3 1.3 28 117-146 4-31 (36)
158 2eow_A Zinc finger protein 347 77.9 0.89 3.1E-05 29.7 1.5 31 116-149 6-36 (46)
159 2elp_A Zinc finger protein 406 77.8 0.91 3.1E-05 28.4 1.4 29 116-146 3-32 (37)
160 2yts_A Zinc finger protein 484 77.6 0.91 3.1E-05 29.7 1.5 31 116-149 6-36 (46)
161 2eml_A Zinc finger protein 28 77.6 0.97 3.3E-05 29.7 1.6 30 115-146 5-34 (46)
162 2en3_A ZFP-95, zinc finger pro 77.6 0.83 2.8E-05 30.0 1.3 29 116-146 6-34 (46)
163 2eoz_A Zinc finger protein 473 77.5 1.1 3.7E-05 29.6 1.8 29 116-146 6-34 (46)
164 1x6h_A Transcriptional repress 77.3 0.86 2.9E-05 33.1 1.4 34 115-150 8-41 (86)
165 2en2_A B-cell lymphoma 6 prote 77.2 0.92 3.1E-05 29.1 1.4 31 116-149 5-35 (42)
166 2ee8_A Protein ODD-skipped-rel 77.1 0.51 1.8E-05 35.9 0.1 46 101-148 18-69 (106)
167 2eoo_A ZFP-95, zinc finger pro 77.1 1 3.6E-05 29.6 1.6 31 116-149 6-36 (46)
168 2em8_A Zinc finger protein 224 77.0 0.96 3.3E-05 29.8 1.4 32 115-149 5-36 (46)
169 2eof_A Zinc finger protein 268 77.0 0.95 3.2E-05 29.2 1.4 29 116-146 6-34 (44)
170 4fo9_A E3 SUMO-protein ligase 76.9 0.71 2.4E-05 46.7 1.1 50 69-125 215-272 (360)
171 2epv_A Zinc finger protein 268 76.9 1 3.5E-05 29.5 1.6 32 115-149 5-36 (44)
172 2emx_A Zinc finger protein 268 76.8 1.1 3.7E-05 29.2 1.6 31 116-149 4-34 (44)
173 2ept_A Zinc finger protein 32; 76.8 1.1 3.6E-05 28.8 1.6 29 116-146 4-32 (41)
174 2elt_A Zinc finger protein 406 76.8 1 3.5E-05 27.7 1.4 28 117-146 4-31 (36)
175 2emh_A Zinc finger protein 484 76.7 0.99 3.4E-05 29.6 1.5 31 116-149 6-36 (46)
176 2em4_A Zinc finger protein 28 76.5 0.97 3.3E-05 29.8 1.4 32 115-149 5-36 (46)
177 2el5_A Zinc finger protein 268 76.4 0.95 3.3E-05 29.0 1.3 29 116-146 4-32 (42)
178 2ytp_A Zinc finger protein 484 76.3 0.99 3.4E-05 29.7 1.4 32 115-149 5-36 (46)
179 2emy_A Zinc finger protein 268 76.3 1.1 3.7E-05 29.4 1.5 32 115-149 5-36 (46)
180 2eps_A POZ-, at HOOK-, and zin 76.3 1.1 3.8E-05 30.9 1.7 31 118-150 8-38 (54)
181 2ysp_A Zinc finger protein 224 76.2 1.1 3.9E-05 29.3 1.7 31 116-149 6-36 (46)
182 2els_A Zinc finger protein 406 76.2 1.1 3.8E-05 27.7 1.5 26 119-146 6-31 (36)
183 2emf_A Zinc finger protein 484 76.1 1 3.4E-05 29.7 1.4 29 116-146 6-34 (46)
184 2em5_A ZFP-95, zinc finger pro 75.9 0.98 3.4E-05 29.8 1.3 31 116-149 6-36 (46)
185 2ytf_A Zinc finger protein 268 75.9 1 3.5E-05 29.5 1.3 29 116-146 6-34 (46)
186 3t7l_A Zinc finger FYVE domain 75.9 0.89 3.1E-05 37.0 1.3 50 68-117 19-81 (90)
187 2el4_A Zinc finger protein 268 75.7 1.1 3.7E-05 29.3 1.4 29 116-146 6-34 (46)
188 2yrj_A Zinc finger protein 473 75.7 1.1 3.8E-05 29.3 1.5 29 116-146 6-34 (46)
189 2el6_A Zinc finger protein 268 75.7 1.1 3.6E-05 29.6 1.4 32 115-149 5-36 (46)
190 2emj_A Zinc finger protein 28 75.7 1.1 3.8E-05 29.5 1.5 31 116-149 6-36 (46)
191 2yte_A Zinc finger protein 473 75.6 0.7 2.4E-05 29.6 0.5 31 116-149 4-34 (42)
192 2ep2_A Zinc finger protein 484 75.5 1 3.5E-05 29.5 1.3 31 116-149 6-36 (46)
193 2epw_A Zinc finger protein 268 75.5 1 3.6E-05 29.4 1.3 31 116-149 6-36 (46)
194 2eoj_A Zinc finger protein 268 75.5 0.95 3.3E-05 29.3 1.1 29 116-146 6-34 (44)
195 2en9_A Zinc finger protein 28 75.4 0.76 2.6E-05 30.3 0.6 31 116-149 6-36 (46)
196 3k1l_B Fancl; UBC, ring, RWD, 75.4 0.65 2.2E-05 47.6 0.4 43 69-111 308-372 (381)
197 2yu5_A Zinc finger protein 473 75.3 1.1 3.7E-05 29.2 1.3 29 116-146 6-34 (44)
198 2ytk_A Zinc finger protein 347 75.2 1.1 3.7E-05 29.4 1.3 31 116-149 6-36 (46)
199 2m0f_A Zinc finger and BTB dom 75.2 1.2 4.2E-05 25.6 1.4 22 123-146 3-24 (29)
200 2em2_A Zinc finger protein 28 75.1 1.1 3.8E-05 29.5 1.4 29 116-146 6-34 (46)
201 2kvh_A Zinc finger and BTB dom 75.1 1.2 4.2E-05 25.8 1.4 23 122-146 3-25 (27)
202 2em9_A Zinc finger protein 224 75.0 1.2 4.2E-05 29.1 1.5 31 116-149 6-36 (46)
203 2ep3_A Zinc finger protein 484 75.0 1 3.5E-05 29.6 1.1 29 116-146 6-34 (46)
204 2kmk_A Zinc finger protein GFI 74.9 0.88 3E-05 32.6 0.9 33 115-149 22-54 (82)
205 2em7_A Zinc finger protein 224 74.8 1.1 3.8E-05 29.4 1.3 31 116-149 6-36 (46)
206 2en1_A Zinc finger protein 224 74.6 1.3 4.4E-05 29.1 1.6 31 116-149 6-36 (46)
207 2elr_A Zinc finger protein 406 74.6 0.87 3E-05 28.0 0.7 27 118-146 5-31 (36)
208 2ep0_A Zinc finger protein 28 74.6 1.1 3.7E-05 29.4 1.2 31 116-149 6-36 (46)
209 2yto_A Zinc finger protein 484 74.5 1.3 4.5E-05 29.1 1.6 32 115-149 5-36 (46)
210 2ytj_A Zinc finger protein 484 74.5 1.1 3.6E-05 29.5 1.1 31 116-149 6-36 (46)
211 2emg_A Zinc finger protein 484 74.4 0.81 2.8E-05 30.1 0.5 31 116-149 6-36 (46)
212 2eq1_A Zinc finger protein 347 74.3 0.85 2.9E-05 30.0 0.6 31 116-149 6-36 (46)
213 2emp_A Zinc finger protein 347 74.3 1.1 3.9E-05 29.3 1.3 29 116-146 6-34 (46)
214 2elv_A Zinc finger protein 406 74.3 1.3 4.4E-05 27.5 1.5 27 118-146 5-31 (36)
215 2eos_A B-cell lymphoma 6 prote 74.1 0.75 2.6E-05 29.7 0.3 29 116-146 5-33 (42)
216 2ene_A Zinc finger protein 347 74.1 1.1 3.7E-05 29.4 1.1 31 116-149 6-36 (46)
217 2eor_A Zinc finger protein 224 74.1 1.2 4.1E-05 29.1 1.3 29 116-146 6-34 (46)
218 2yu8_A Zinc finger protein 347 74.0 1.1 3.9E-05 29.3 1.2 31 116-149 6-36 (46)
219 2eq4_A Zinc finger protein 224 73.8 0.98 3.4E-05 29.5 0.8 29 116-146 6-34 (46)
220 2cup_A Skeletal muscle LIM-pro 73.7 1.8 6E-05 34.0 2.4 55 69-123 33-90 (101)
221 2emm_A ZFP-95, zinc finger pro 73.5 1.3 4.3E-05 29.0 1.3 31 116-149 6-36 (46)
222 2epz_A Zinc finger protein 28 73.4 0.81 2.8E-05 30.1 0.3 29 116-146 6-34 (46)
223 2eoe_A Zinc finger protein 347 73.4 1.1 3.7E-05 29.3 1.0 31 116-149 6-36 (46)
224 2eoy_A Zinc finger protein 473 73.1 1.3 4.4E-05 29.2 1.3 31 116-149 6-36 (46)
225 2ytg_A ZFP-95, zinc finger pro 73.0 1.1 3.8E-05 29.4 0.9 29 116-146 6-34 (46)
226 2enf_A Zinc finger protein 347 73.0 0.87 3E-05 29.9 0.4 31 116-149 6-36 (46)
227 2eq0_A Zinc finger protein 347 72.9 1.4 4.7E-05 28.9 1.4 31 116-149 6-36 (46)
228 2eme_A Zinc finger protein 473 72.8 1.2 4.2E-05 29.1 1.1 31 116-149 6-36 (46)
229 2ytb_A Zinc finger protein 32; 72.8 0.84 2.9E-05 29.2 0.3 29 116-146 5-33 (42)
230 2enh_A Zinc finger protein 28 72.8 0.96 3.3E-05 29.8 0.6 31 116-149 6-36 (46)
231 2lt7_A Transcriptional regulat 72.8 1.6 5.4E-05 36.5 2.0 26 117-144 45-70 (133)
232 2ema_A Zinc finger protein 347 72.7 1.6 5.4E-05 28.6 1.7 31 116-149 6-36 (46)
233 2eq3_A Zinc finger protein 347 72.6 1.1 3.7E-05 29.3 0.8 29 116-146 6-34 (46)
234 2ytn_A Zinc finger protein 347 72.4 1 3.4E-05 29.6 0.6 29 116-146 6-34 (46)
235 2emb_A Zinc finger protein 473 72.4 1.5 5E-05 28.5 1.4 31 116-149 6-36 (44)
236 1klr_A Zinc finger Y-chromosom 72.3 0.91 3.1E-05 26.3 0.3 24 123-148 3-26 (30)
237 2ely_A Zinc finger protein 224 72.0 0.9 3.1E-05 29.9 0.3 32 115-149 5-36 (46)
238 2yso_A ZFP-95, zinc finger pro 72.0 1.6 5.6E-05 28.5 1.6 30 115-146 5-34 (46)
239 2enc_A Zinc finger protein 224 71.9 1.5 5E-05 28.8 1.3 31 116-149 6-36 (46)
240 2ytd_A Zinc finger protein 473 71.7 1.5 5.2E-05 28.7 1.4 31 116-149 6-36 (46)
241 2eoq_A Zinc finger protein 224 71.6 0.94 3.2E-05 29.8 0.3 31 116-149 6-36 (46)
242 1njq_A Superman protein; zinc- 71.1 1.7 5.7E-05 27.6 1.5 25 120-146 4-28 (39)
243 2xjy_A Rhombotin-2; oncoprotei 71.1 1.4 4.7E-05 36.2 1.3 52 70-123 30-90 (131)
244 1paa_A Yeast transcription fac 70.8 0.92 3.1E-05 26.6 0.1 25 123-149 3-27 (30)
245 1x6e_A Zinc finger protein 24; 70.8 1.7 5.9E-05 31.2 1.6 30 115-146 7-36 (72)
246 2en7_A Zinc finger protein 268 70.8 0.89 3E-05 29.4 0.1 29 116-146 6-34 (44)
247 2eov_A Zinc finger protein 484 70.8 1.1 3.8E-05 29.3 0.6 31 116-149 6-36 (46)
248 2lvr_A Zinc finger and BTB dom 73.5 0.87 3E-05 26.6 0.0 23 122-146 3-25 (30)
249 1znf_A 31ST zinc finger from X 70.8 1.2 4.1E-05 25.5 0.6 22 123-146 2-23 (27)
250 2eq2_A Zinc finger protein 347 70.4 0.81 2.8E-05 30.1 -0.2 31 116-149 6-36 (46)
251 2eop_A Zinc finger protein 268 70.3 1.1 3.8E-05 29.3 0.4 31 116-149 6-36 (46)
252 2emk_A Zinc finger protein 28 70.2 1.1 3.8E-05 29.5 0.5 31 116-149 6-36 (46)
253 2kvf_A Zinc finger and BTB dom 70.2 1.6 5.4E-05 25.3 1.1 23 122-146 3-25 (28)
254 2emz_A ZFP-95, zinc finger pro 70.1 1 3.5E-05 29.7 0.3 29 116-146 6-34 (46)
255 2eon_A ZFP-95, zinc finger pro 70.1 1 3.4E-05 29.8 0.2 31 116-149 6-36 (46)
256 2en8_A Zinc finger protein 224 70.0 1.8 6.1E-05 28.3 1.4 29 116-146 6-34 (46)
257 2yth_A Zinc finger protein 224 69.8 1.1 3.8E-05 29.5 0.4 29 116-146 6-34 (46)
258 2em0_A Zinc finger protein 224 69.8 1.3 4.6E-05 29.0 0.8 31 116-149 6-36 (46)
259 2ytt_A Zinc finger protein 473 69.6 0.81 2.8E-05 30.2 -0.3 30 115-146 5-34 (46)
260 2eoh_A Zinc finger protein 28 69.6 1.1 3.7E-05 29.5 0.3 29 116-146 6-34 (46)
261 2epr_A POZ-, at HOOK-, and zin 69.4 2.4 8.1E-05 28.3 2.0 27 118-146 8-34 (48)
262 2ytr_A Zinc finger protein 347 69.4 0.9 3.1E-05 29.7 -0.2 29 116-146 6-34 (46)
263 2ytq_A Zinc finger protein 268 69.1 1.1 3.8E-05 29.5 0.3 31 116-149 6-36 (46)
264 2xqn_T Testin, TESS; metal-bin 68.7 2.2 7.4E-05 34.9 2.0 55 70-124 31-88 (126)
265 1joc_A EEA1, early endosomal a 68.5 1.4 4.9E-05 37.8 0.9 30 69-98 69-101 (125)
266 2ytm_A Zinc finger protein 28 68.4 1.2 4.1E-05 29.4 0.3 29 116-146 6-34 (46)
267 1zw8_A Zinc-responsive transcr 68.2 1.3 4.3E-05 33.6 0.5 29 123-151 2-30 (64)
268 2yti_A Zinc finger protein 347 68.2 0.94 3.2E-05 29.8 -0.3 31 116-149 6-36 (46)
269 2ep1_A Zinc finger protein 484 68.1 1.2 4E-05 29.2 0.2 31 116-149 6-36 (46)
270 2epq_A POZ-, at HOOK-, and zin 67.9 2.2 7.6E-05 27.9 1.6 28 117-146 5-32 (45)
271 1rik_A E6APC1 peptide; E6-bind 67.5 2.4 8.2E-05 24.5 1.5 22 123-146 3-24 (29)
272 1x5w_A Zinc finger protein 64, 66.9 2.5 8.5E-05 30.1 1.8 28 119-149 6-33 (70)
273 2em6_A Zinc finger protein 224 66.6 1.5 5.1E-05 28.9 0.5 31 116-149 6-36 (46)
274 2eou_A Zinc finger protein 473 66.6 1.5 5.2E-05 28.5 0.5 29 116-146 6-34 (44)
275 2eom_A ZFP-95, zinc finger pro 66.6 1.4 4.9E-05 29.0 0.4 31 116-149 6-36 (46)
276 1rut_X Flinc4, fusion protein 66.5 2.1 7.2E-05 37.7 1.6 63 70-134 33-107 (188)
277 2yrm_A B-cell lymphoma 6 prote 66.5 1.5 5.3E-05 28.6 0.5 29 116-146 4-32 (43)
278 2lvu_A Zinc finger and BTB dom 69.8 1.2 4.2E-05 25.6 0.0 22 123-146 3-24 (26)
279 1z2q_A LM5-1; membrane protein 66.2 2.4 8.4E-05 33.8 1.8 49 66-114 18-81 (84)
280 1yui_A GAGA-factor; complex (D 65.9 1.2 4.3E-05 30.5 -0.0 31 114-146 16-46 (54)
281 2kvg_A Zinc finger and BTB dom 65.7 2.3 8E-05 24.9 1.2 22 122-145 3-24 (27)
282 2elz_A Zinc finger protein 224 65.3 1.6 5.3E-05 28.8 0.4 31 116-149 6-36 (46)
283 1ard_A Yeast transcription fac 64.5 1.9 6.4E-05 24.9 0.6 22 123-146 3-24 (29)
284 2m0e_A Zinc finger and BTB dom 64.0 1.6 5.4E-05 25.0 0.2 22 123-146 3-24 (29)
285 1p7a_A BF3, BKLF, kruppel-like 64.0 1.8 6E-05 26.9 0.4 28 117-146 6-33 (37)
286 2jrp_A Putative cytoplasmic pr 63.4 1 3.5E-05 37.4 -1.0 50 70-126 3-55 (81)
287 2lvt_A Zinc finger and BTB dom 66.5 1.6 5.4E-05 25.5 0.0 21 123-145 3-23 (29)
288 2dmi_A Teashirt homolog 3; zin 61.8 2 6.7E-05 33.2 0.4 33 112-146 9-41 (115)
289 3mpx_A FYVE, rhogef and PH dom 61.5 1.7 5.8E-05 42.0 0.0 30 69-98 375-407 (434)
290 2d9h_A Zinc finger protein 692 61.4 3.5 0.00012 29.8 1.7 28 119-148 4-31 (78)
291 2rgt_A Fusion of LIM/homeobox 59.5 4 0.00014 35.3 2.0 65 70-135 34-104 (169)
292 1vfy_A Phosphatidylinositol-3- 59.2 3.2 0.00011 32.4 1.2 44 70-113 12-70 (73)
293 2jne_A Hypothetical protein YF 58.5 1.4 4.8E-05 38.1 -1.0 50 70-126 33-85 (101)
294 1rim_A E6APC2 peptide; E6-bind 58.2 2.4 8.3E-05 26.3 0.3 22 123-146 3-24 (33)
295 2csh_A Zinc finger protein 297 57.8 4.3 0.00015 31.0 1.7 32 115-148 30-61 (110)
296 2ko5_A Ring finger protein Z; 56.2 3.3 0.00011 35.7 0.9 39 70-110 29-71 (99)
297 1dvp_A HRS, hepatocyte growth 55.3 3 0.0001 38.0 0.5 30 69-98 161-193 (220)
298 3lqh_A Histone-lysine N-methyl 54.9 2.9 9.9E-05 38.4 0.4 20 69-88 2-24 (183)
299 2lce_A B-cell lymphoma 6 prote 54.0 3.4 0.00012 29.6 0.6 28 117-146 12-39 (74)
300 3uk3_C Zinc finger protein 217 53.3 3.7 0.00013 27.7 0.6 24 121-146 3-26 (57)
301 1wjp_A Zinc finger protein 295 52.9 4 0.00014 31.2 0.8 23 121-145 41-63 (107)
302 1x4u_A Zinc finger, FYVE domai 52.4 7.3 0.00025 31.0 2.3 33 66-98 11-46 (84)
303 1y02_A CARP2, FYVE-ring finger 52.3 6 0.0002 34.3 1.9 80 69-163 19-106 (120)
304 2yw8_A RUN and FYVE domain-con 52.1 5.2 0.00018 31.8 1.4 33 66-98 16-51 (82)
305 2ghf_A ZHX1, zinc fingers and 52.0 4.6 0.00016 32.9 1.1 32 115-148 11-42 (102)
306 3zyq_A Hepatocyte growth facto 51.8 3.4 0.00012 38.2 0.3 30 69-98 164-196 (226)
307 1x63_A Skeletal muscle LIM-pro 50.4 4.1 0.00014 30.8 0.5 10 71-80 17-26 (82)
308 1b8t_A Protein (CRP1); LIM dom 50.2 5.3 0.00018 35.2 1.3 33 102-136 117-154 (192)
309 2xqn_T Testin, TESS; metal-bin 50.1 5.8 0.0002 32.3 1.4 60 69-134 63-125 (126)
310 2egq_A FHL1 protein; LIM domai 49.8 4.7 0.00016 30.2 0.7 34 90-123 3-42 (77)
311 1zw8_A Zinc-responsive transcr 49.8 6.2 0.00021 29.8 1.4 28 121-148 37-64 (64)
312 1zbd_B Rabphilin-3A; G protein 49.6 5.1 0.00017 35.1 1.0 54 64-127 50-103 (134)
313 1x62_A C-terminal LIM domain p 49.2 10 0.00034 28.8 2.5 50 69-123 15-64 (79)
314 1wfk_A Zinc finger, FYVE domai 48.3 5.2 0.00018 32.6 0.8 30 69-98 9-41 (88)
315 1fv5_A First zinc finger of U- 47.6 6.8 0.00023 26.8 1.2 24 119-144 5-28 (36)
316 1we9_A PHD finger family prote 47.5 6.9 0.00023 29.3 1.3 23 67-89 4-26 (64)
317 2ej4_A Zinc finger protein ZIC 47.4 4.9 0.00017 29.8 0.5 24 128-151 29-52 (95)
318 2lv2_A Insulinoma-associated p 47.4 6.6 0.00023 31.0 1.3 31 116-148 22-52 (85)
319 1x3h_A Leupaxin; paxillin fami 46.8 4.5 0.00015 30.5 0.2 12 70-81 16-27 (80)
320 2cuq_A Four and A half LIM dom 46.8 5.3 0.00018 30.1 0.6 12 70-81 16-27 (80)
321 1weo_A Cellulose synthase, cat 46.7 9.4 0.00032 32.6 2.2 46 68-113 15-71 (93)
322 1m3v_A FLIN4, fusion of the LI 46.4 5.1 0.00017 33.1 0.5 42 70-113 33-82 (122)
323 2ct7_A Ring finger protein 31; 46.3 7.7 0.00026 30.9 1.5 31 68-98 24-59 (86)
324 2gqj_A Zinc finger protein KIA 44.8 4.3 0.00015 31.2 -0.2 33 115-149 17-50 (98)
325 2d8x_A Protein pinch; LIM doma 44.8 7.4 0.00025 28.6 1.1 50 69-123 5-54 (70)
326 2ri7_A Nucleosome-remodeling f 43.7 8.5 0.00029 33.5 1.5 43 68-111 7-61 (174)
327 2cot_A Zinc finger protein 435 42.1 5.6 0.00019 28.7 0.1 27 118-146 14-40 (77)
328 2jtn_A LIM domain-binding prot 41.4 7.5 0.00026 34.0 0.8 44 70-114 88-133 (182)
329 2zet_C Melanophilin; complex, 41.2 9.8 0.00033 34.1 1.6 14 68-81 67-80 (153)
330 2ctd_A Zinc finger protein 512 39.8 6.5 0.00022 30.8 0.2 28 117-146 29-57 (96)
331 1x68_A FHL5 protein; four-and- 39.7 14 0.00048 27.7 2.0 50 69-123 5-58 (76)
332 2xb1_A Pygopus homolog 2, B-ce 39.1 7.2 0.00025 32.6 0.3 43 69-111 3-63 (105)
333 2fc7_A ZZZ3 protein; structure 38.5 13 0.00044 30.2 1.7 31 69-99 21-57 (82)
334 2iyb_E Testin, TESS, TES; LIM 38.3 11 0.00037 27.7 1.2 50 70-123 3-55 (65)
335 3mjh_B Early endosome antigen 37.9 14 0.00047 26.2 1.6 27 123-151 6-32 (34)
336 2pv0_B DNA (cytosine-5)-methyl 36.9 20 0.00068 36.7 3.2 63 69-144 50-126 (386)
337 4gzn_C ZFP-57, zinc finger pro 36.9 14 0.00047 27.4 1.5 29 120-151 2-30 (60)
338 1x64_A Alpha-actinin-2 associa 36.8 14 0.0005 28.5 1.7 50 69-123 25-74 (89)
339 1x6f_A Zinc finger protein 462 36.8 13 0.00046 29.1 1.5 31 116-149 19-49 (88)
340 2jrp_A Putative cytoplasmic pr 36.3 4.9 0.00017 33.3 -1.1 36 69-112 18-63 (81)
341 2jmo_A Parkin; IBR, E3 ligase, 36.2 17 0.00058 28.7 2.1 32 69-100 25-68 (80)
342 2epp_A POZ-, at HOOK-, and zin 35.9 10 0.00035 29.0 0.7 29 119-150 10-38 (66)
343 1llm_C Chimera of ZIF23-GCN4; 35.7 11 0.00039 27.7 0.9 36 112-149 21-56 (88)
344 2cu8_A Cysteine-rich protein 2 35.7 11 0.00036 28.3 0.8 51 69-123 9-59 (76)
345 1x4l_A Skeletal muscle LIM-pro 35.4 17 0.0006 26.7 1.9 48 69-123 5-58 (72)
346 2d8z_A Four and A half LIM dom 35.3 20 0.0007 26.1 2.2 50 69-123 5-54 (70)
347 2dar_A PDZ and LIM domain prot 35.2 18 0.00063 28.0 2.1 50 69-123 25-74 (90)
348 2cur_A Skeletal muscle LIM-pro 34.5 17 0.00059 26.6 1.7 50 69-123 5-54 (69)
349 2co8_A NEDD9 interacting prote 34.0 21 0.00072 27.4 2.2 48 69-123 15-67 (82)
350 1wep_A PHF8; structural genomi 34.0 12 0.0004 29.4 0.8 22 67-89 10-31 (79)
351 2dlo_A Thyroid receptor-intera 33.6 10 0.00036 28.7 0.4 13 69-81 15-27 (81)
352 2kfq_A FP1; protein, de novo p 33.4 2.3 7.7E-05 26.1 -2.8 22 123-146 3-24 (32)
353 1vyx_A ORF K3, K3RING; zinc-bi 33.0 17 0.0006 27.3 1.6 42 68-110 5-57 (60)
354 2k16_A Transcription initiatio 32.8 26 0.0009 26.8 2.6 47 66-113 15-72 (75)
355 2lbm_A Transcriptional regulat 32.5 18 0.00061 32.3 1.8 55 68-134 13-85 (142)
356 1x61_A Thyroid receptor intera 31.6 23 0.0008 25.9 2.1 51 69-123 5-56 (72)
357 2kpi_A Uncharacterized protein 31.4 7.8 0.00027 29.6 -0.6 29 101-135 11-39 (56)
358 4cpa_I Metallocarboxypeptidase 31.4 14 0.00047 27.1 0.7 29 73-103 6-34 (38)
359 2d9k_A FLN29 gene product; zin 31.0 3.4 0.00011 31.3 -2.7 27 120-149 41-67 (75)
360 1tot_A CREB-binding protein; z 30.8 17 0.00059 27.2 1.2 31 69-99 6-37 (52)
361 1v6g_A Actin binding LIM prote 29.7 15 0.0005 27.8 0.7 10 71-80 17-26 (81)
362 3v43_A Histone acetyltransfera 29.4 11 0.00037 31.3 -0.1 17 63-79 20-36 (112)
363 2elu_A Zinc finger protein 406 28.5 20 0.00068 26.0 1.1 22 129-150 14-35 (37)
364 2jne_A Hypothetical protein YF 28.4 6.1 0.00021 34.2 -1.8 36 69-112 48-93 (101)
365 1a7i_A QCRP2 (LIM1); LIM domai 28.3 12 0.00042 28.3 0.0 12 69-80 7-18 (81)
366 1zfo_A LAsp-1; LIM domain, zin 28.2 10 0.00035 25.4 -0.4 23 101-123 4-26 (31)
367 2d8y_A Eplin protein; LIM doma 28.0 14 0.00046 28.8 0.2 51 69-123 15-65 (91)
368 2dj7_A Actin-binding LIM prote 27.4 21 0.00071 27.5 1.2 48 69-125 15-65 (80)
369 1wyh_A SLIM 2, skeletal muscle 27.2 35 0.0012 24.9 2.3 51 69-123 5-56 (72)
370 2l4z_A DNA endonuclease RBBP8, 27.1 17 0.0006 30.4 0.7 39 69-111 61-99 (123)
371 1x6a_A LIMK-2, LIM domain kina 26.7 11 0.00038 28.4 -0.5 39 69-112 15-53 (81)
372 3kv5_D JMJC domain-containing 26.7 11 0.00039 38.9 -0.5 42 68-110 36-89 (488)
373 2dip_A Zinc finger SWIM domain 26.7 29 0.001 29.0 2.0 33 66-98 28-63 (98)
374 1zr9_A Zinc finger protein 593 26.5 14 0.00046 32.5 -0.0 34 116-151 44-78 (124)
375 4ask_A Lysine-specific demethy 26.4 17 0.0006 38.5 0.7 18 22-39 310-327 (510)
376 2pv0_B DNA (cytosine-5)-methyl 26.2 29 0.00099 35.5 2.3 29 70-98 94-123 (386)
377 2vrw_B P95VAV, VAV1, proto-onc 25.6 35 0.0012 32.9 2.6 36 69-104 357-396 (406)
378 2ozu_A Histone acetyltransfera 25.3 22 0.00076 35.3 1.2 29 119-149 38-66 (284)
379 1wig_A KIAA1808 protein; LIM d 25.2 34 0.0012 25.7 2.0 50 69-123 5-55 (73)
380 1iml_A CRIP, cysteine rich int 25.2 23 0.0008 26.4 1.0 10 71-80 29-38 (76)
381 3a1b_A DNA (cytosine-5)-methyl 25.1 21 0.00072 32.6 0.9 56 68-135 35-104 (159)
382 2wbt_A B-129; zinc finger; 2.7 24.7 27 0.00093 27.3 1.4 29 117-148 69-97 (129)
383 3to7_A Histone acetyltransfera 24.6 27 0.00092 34.6 1.6 28 118-147 32-59 (276)
384 2ehe_A Four and A half LIM dom 24.6 12 0.00043 28.2 -0.6 12 69-80 15-26 (82)
385 1g47_A Pinch protein; LIM doma 24.1 36 0.0012 25.1 1.9 48 69-123 11-62 (77)
386 3avr_A Lysine-specific demethy 24.0 21 0.00071 37.9 0.8 18 22-39 335-352 (531)
387 1tjl_A DNAK suppressor protein 23.7 37 0.0013 30.3 2.2 29 69-98 111-140 (151)
388 2ou2_A Histone acetyltransfera 23.4 28 0.00096 34.4 1.5 29 118-148 30-58 (280)
389 4gne_A Histone-lysine N-methyl 22.9 41 0.0014 28.6 2.2 48 68-126 14-73 (107)
390 1x4k_A Skeletal muscle LIM-pro 22.6 26 0.00089 25.6 0.9 51 69-123 5-56 (72)
391 3d00_A Tungsten formylmethanof 22.3 31 0.0011 31.6 1.5 24 69-98 163-186 (191)
392 3a1b_A DNA (cytosine-5)-methyl 21.2 44 0.0015 30.6 2.2 29 70-98 80-109 (159)
393 2kq9_A DNAK suppressor protein 21.0 31 0.0011 29.0 1.1 30 68-98 80-110 (112)
394 2vpb_A Hpygo1, pygopus homolog 20.5 36 0.0012 26.3 1.3 32 67-98 6-41 (65)
395 2cor_A Pinch protein; LIM doma 20.4 48 0.0016 25.2 2.0 49 69-123 15-63 (79)
396 4esj_A Type-2 restriction enzy 20.3 24 0.00083 34.6 0.4 30 69-98 34-64 (257)
397 3o36_A Transcription intermedi 20.1 39 0.0013 29.8 1.6 10 100-109 42-51 (184)
No 1
>3vk6_A E3 ubiquitin-protein ligase hakai; HYB, phosphotyrosine binding domain; 1.90A {Mus musculus}
Probab=100.00 E-value=2.8e-36 Score=257.10 Aligned_cols=82 Identities=40% Similarity=0.993 Sum_probs=78.9
Q ss_pred cccccCCCccccccccccccccccchhhhh-----CCCCcccchHhHhhheeeecCCcEEEec-CCchhhhhcChhHHHH
Q 011117 69 VHFCVRCDYPIAIYGRLNPCEHVFCLDCAR-----SDSMCYLCDERIQKIQTIKLMEGIFICA-APHCLKSFLKKTEFEA 142 (493)
Q Consensus 69 vhFCdICdlPI~iygRmIPCKHVFCydCA~-----sDktCP~Cna~VqrIEri~p~esIFIC~-~~gCkRtYLSqRDLQA 142 (493)
+|||++|++||++|||||||||||||+||. .+++||+|+++|++||++. +|+||||+ +++|+|||||+|||||
T Consensus 1 ~hfC~~C~~Pi~iygRmIPCkHvFCydCa~~~~~~~~k~Cp~C~~~V~rVe~~~-~~~if~C~~~~~CkrtyLs~rdlqa 79 (101)
T 3vk6_A 1 VHFCDKCGLPIKVYGRMIPCKHVFCYDCAILHEKKGDKMCPGCSDPVQRIEQCT-RGSLFMCSIVQGCKRTYLSQRDLQA 79 (101)
T ss_dssp CCBCTTTCSBCSEEEEEETTCCEEEHHHHHHHHHTTCCBCTTTCCBCSEEEEEE-GGGCCCCCCCCCCCCCCSSHHHHHH
T ss_pred CeecCccCCCeEEEeeeccccccHHHHHHHHHHhccCCCCcCcCCeeeeeEEec-cCCEEECCCCCCHHHHhcCHHHHHH
Confidence 599999999999999999999999999995 5799999999999999986 59999999 9999999999999999
Q ss_pred hhhhhhccc
Q 011117 143 HIHVSHADL 151 (493)
Q Consensus 143 HInhrH~~l 151 (493)
||||+|++.
T Consensus 80 HI~~~H~~~ 88 (101)
T 3vk6_A 80 HINHRHMRA 88 (101)
T ss_dssp HHHHHTTTS
T ss_pred HHHHHhhhc
Confidence 999999998
No 2
>3hct_A TNF receptor-associated factor 6; cross-brace, beta-BETA-alpha, coiled coil, cytoplasm, metal- binding, UBL conjugation, UBL conjugation pathway; 2.10A {Homo sapiens} PDB: 3hcu_A 2eci_A 2jmd_A
Probab=98.56 E-value=7.6e-09 Score=85.56 Aligned_cols=81 Identities=21% Similarity=0.406 Sum_probs=62.4
Q ss_pred cccccCCCccccccccccccccccchhhhh-----CCCCcccchHhHhhheeee-------cCCcEEEecCCchhhhhcC
Q 011117 69 VHFCVRCDYPIAIYGRLNPCEHVFCLDCAR-----SDSMCYLCDERIQKIQTIK-------LMEGIFICAAPHCLKSFLK 136 (493)
Q Consensus 69 vhFCdICdlPI~iygRmIPCKHVFCydCA~-----sDktCP~Cna~VqrIEri~-------p~esIFIC~~~gCkRtYLS 136 (493)
.+.|+||...+...+. ++|+|+||..|+. ...+||.|+..+...+... ..+-...|...+|.... .
T Consensus 18 ~~~C~IC~~~~~~p~~-~~CgH~fC~~Ci~~~~~~~~~~CP~Cr~~~~~~~~~~~~~l~~~i~~l~v~C~n~gC~~~~-~ 95 (118)
T 3hct_A 18 KYECPICLMALREAVQ-TPCGHRFCKACIIKSIRDAGHKCPVDNEILLENQLFPDNFAKREILSLMVKCPNEGCLHKM-E 95 (118)
T ss_dssp GGBCTTTCSBCSSEEE-CTTSCEEEHHHHHHHHHHHCSBCTTTCCBCCGGGCEECHHHHHHHHTSEEECSSTTCCCEE-E
T ss_pred CCCCCcCChhhcCeEE-CCcCChhhHHHHHHHHhhCCCCCCCCCCCcCHHhcccCHHHHHHHccceeECCCCCCCCEE-e
Confidence 6899999999988865 5899999999997 2359999999887643111 12346789999998765 6
Q ss_pred hhHHHHhhhhhhccc
Q 011117 137 KTEFEAHIHVSHADL 151 (493)
Q Consensus 137 qRDLQAHInhrH~~l 151 (493)
..+|+.|++..|..+
T Consensus 96 ~~~l~~H~~~c~~~~ 110 (118)
T 3hct_A 96 LRHLEDHQAHCEFAL 110 (118)
T ss_dssp GGGSGGGTSSSCC--
T ss_pred eHHHHHHHHHchhhh
Confidence 889999998888877
No 3
>1chc_A Equine herpes virus-1 ring domain; viral protein; NMR {Equid herpesvirus 1} SCOP: g.44.1.1
Probab=98.55 E-value=1.2e-08 Score=75.93 Aligned_cols=51 Identities=24% Similarity=0.526 Sum_probs=42.7
Q ss_pred cccccccCCCccccccccccccccccchhhhh----CCCCcccchHhHhhheeee
Q 011117 67 ERVHFCVRCDYPIAIYGRLNPCEHVFCLDCAR----SDSMCYLCDERIQKIQTIK 117 (493)
Q Consensus 67 EKvhFCdICdlPI~iygRmIPCKHVFCydCA~----sDktCP~Cna~VqrIEri~ 117 (493)
+....|.||...+....++++|+|+||++|+. ...+||.|+..+..+....
T Consensus 3 ~~~~~C~IC~~~~~~~~~~~~C~H~fc~~Ci~~~~~~~~~CP~Cr~~~~~~~~~~ 57 (68)
T 1chc_A 3 TVAERCPICLEDPSNYSMALPCLHAFCYVCITRWIRQNPTCPLCKVPVESVVHTI 57 (68)
T ss_dssp CCCCCCSSCCSCCCSCEEETTTTEEESTTHHHHHHHHSCSTTTTCCCCCCEECCC
T ss_pred CCCCCCeeCCccccCCcEecCCCCeeHHHHHHHHHhCcCcCcCCChhhHhhhhcc
Confidence 44678999999998877899999999999997 4589999999987665443
No 4
>3knv_A TNF receptor-associated factor 2; cross-brace, alternative splicing, apoptosis, cytoplasm, metal-binding, UBL conjugation, zinc, zinc-finger; 1.90A {Homo sapiens}
Probab=98.52 E-value=1.4e-08 Score=87.96 Aligned_cols=81 Identities=17% Similarity=0.272 Sum_probs=61.0
Q ss_pred ccccccCCCccccccccccccccccchhhhh-----CCCCcccchHhHh-----------------hheeeecCCcEEEe
Q 011117 68 RVHFCVRCDYPIAIYGRLNPCEHVFCLDCAR-----SDSMCYLCDERIQ-----------------KIQTIKLMEGIFIC 125 (493)
Q Consensus 68 KvhFCdICdlPI~iygRmIPCKHVFCydCA~-----sDktCP~Cna~Vq-----------------rIEri~p~esIFIC 125 (493)
..+.|+||...+..++. ++|+|+||..|+. ...+||.|+..|. .+++. .++-...|
T Consensus 30 ~~~~C~IC~~~~~~pv~-~~CgH~FC~~Ci~~~~~~~~~~CP~Cr~~~~~~~~~~~l~~~~~~~d~~~~~~-i~~L~v~C 107 (141)
T 3knv_A 30 AKYLCSACRNVLRRPFQ-AQCGHRYCSFCLASILSSGPQNCAACVHEGIYEEGISILESSSAFPDNAARRE-VESLPAVC 107 (141)
T ss_dssp GGGBCTTTCSBCSSEEE-CTTSCEEEHHHHHHHGGGSCEECHHHHHTTCCCTTTTEECGGGCEECHHHHHH-HHTSEEEC
T ss_pred cCcCCCCCChhhcCcEE-CCCCCccCHHHHHHHHhcCCCCCCCCCCcccccccccccchhhhcccHHHHHH-Hccccccc
Confidence 36899999999998866 5899999999998 2258999999752 11221 12345689
Q ss_pred cCCchhhhhcChhHHHH-hhhhhhccc
Q 011117 126 AAPHCLKSFLKKTEFEA-HIHVSHADL 151 (493)
Q Consensus 126 ~~~gCkRtYLSqRDLQA-HInhrH~~l 151 (493)
...+|..+ ....+|+. |++..++.+
T Consensus 108 pn~GC~~~-~~l~~l~~~H~~~~~~~~ 133 (141)
T 3knv_A 108 PSDGCTWK-GTLKEYESCHEGRCPLML 133 (141)
T ss_dssp CSTTCCCE-EEHHHHHHHTTTCCHHHH
T ss_pred CCCCCCCE-eEHHHHHHHHHHHhHHHH
Confidence 98999766 45888998 987777666
No 5
>2djb_A Polycomb group ring finger protein 6; PCGF6, ring domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=98.44 E-value=4.5e-08 Score=74.27 Aligned_cols=47 Identities=21% Similarity=0.494 Sum_probs=40.7
Q ss_pred ccccccCCCccccccccccccccccchhhhh----CCCCcccchHhHhhhe
Q 011117 68 RVHFCVRCDYPIAIYGRLNPCEHVFCLDCAR----SDSMCYLCDERIQKIQ 114 (493)
Q Consensus 68 KvhFCdICdlPI~iygRmIPCKHVFCydCA~----sDktCP~Cna~VqrIE 114 (493)
..+.|.||...+...+.+.+|.|+||..|+. ...+||.|+..|...+
T Consensus 14 ~~~~C~IC~~~~~~p~~~~~CgH~fC~~Ci~~~~~~~~~CP~Cr~~~~~~~ 64 (72)
T 2djb_A 14 PYILCSICKGYLIDATTITECLHTFCKSCIVRHFYYSNRCPKCNIVVHQTQ 64 (72)
T ss_dssp GGGSCTTTSSCCSSCEECSSSCCEECHHHHHHHHHHCSSCTTTCCCCCSSC
T ss_pred CCCCCCCCChHHHCcCEECCCCCHHHHHHHHHHHHcCCcCCCcCcccCccc
Confidence 4689999999999888888999999999997 4679999999886544
No 6
>2ckl_B Ubiquitin ligase protein RING2; BMI1, RING1B, polycomb, E3-ligase, nuclear protein, chromosomal protein, transcription regulation; 2.0A {Mus musculus} PDB: 3rpg_C 2h0d_B
Probab=98.40 E-value=5.8e-08 Score=84.06 Aligned_cols=49 Identities=22% Similarity=0.497 Sum_probs=41.4
Q ss_pred ccccccCCCccccccccccccccccchhhhh----C-CCCcccchHhHhhheee
Q 011117 68 RVHFCVRCDYPIAIYGRLNPCEHVFCLDCAR----S-DSMCYLCDERIQKIQTI 116 (493)
Q Consensus 68 KvhFCdICdlPI~iygRmIPCKHVFCydCA~----s-DktCP~Cna~VqrIEri 116 (493)
..+.|+||...+...+.+.+|.|+||..|+. . ..+||.|+..|...+.+
T Consensus 53 ~~~~C~IC~~~~~~p~~~~~CgH~fC~~Ci~~~~~~~~~~CP~Cr~~~~~~~~l 106 (165)
T 2ckl_B 53 SELMCPICLDMLKNTMTTKECLHRFCADCIITALRSGNKECPTCRKKLVSKRSL 106 (165)
T ss_dssp HHHBCTTTSSBCSSEEEETTTCCEEEHHHHHHHHHTTCCBCTTTCCBCCSGGGE
T ss_pred CCCCCcccChHhhCcCEeCCCCChhHHHHHHHHHHhCcCCCCCCCCcCCCcccC
Confidence 3679999999999988888999999999998 2 67899999998654433
No 7
>2yur_A Retinoblastoma-binding protein 6; P53-associated cellular protein of testis, proliferation potential-related protein, protein P2P-R; NMR {Homo sapiens}
Probab=98.36 E-value=8.7e-08 Score=73.41 Aligned_cols=49 Identities=22% Similarity=0.527 Sum_probs=39.8
Q ss_pred ccccccCCCccccccccccc-cccccchhhhh-----CC-CCcccchHhHhhheeee
Q 011117 68 RVHFCVRCDYPIAIYGRLNP-CEHVFCLDCAR-----SD-SMCYLCDERIQKIQTIK 117 (493)
Q Consensus 68 KvhFCdICdlPI~iygRmIP-CKHVFCydCA~-----sD-ktCP~Cna~VqrIEri~ 117 (493)
..+.|+||...+...+. ++ |+|+||..|+. .. .+||.|+..+...+.+.
T Consensus 14 ~~~~C~IC~~~~~~p~~-~~~CgH~fC~~Ci~~~~~~~~~~~CP~Cr~~~~~~~~~~ 69 (74)
T 2yur_A 14 DELLCLICKDIMTDAVV-IPCCGNSYCDECIRTALLESDEHTCPTCHQNDVSPDALS 69 (74)
T ss_dssp GGGSCSSSCCCCTTCEE-CSSSCCEECTTHHHHHHHHSSSSCCSSSCCSSCCTTTTT
T ss_pred CCCCCcCCChHHhCCeE-cCCCCCHHHHHHHHHHHHhcCCCcCCCCCCcCCCccccc
Confidence 36899999999988776 67 99999999997 12 58999999876666544
No 8
>2ecn_A Ring finger protein 141; RNF141, ring domain, zinc-binding domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=98.35 E-value=1.2e-07 Score=71.05 Aligned_cols=47 Identities=23% Similarity=0.508 Sum_probs=39.8
Q ss_pred ccccccCCCccccccccccccccccchhhhh----CCCCcccchHhHhhheee
Q 011117 68 RVHFCVRCDYPIAIYGRLNPCEHVFCLDCAR----SDSMCYLCDERIQKIQTI 116 (493)
Q Consensus 68 KvhFCdICdlPI~iygRmIPCKHVFCydCA~----sDktCP~Cna~VqrIEri 116 (493)
....|.||...+.. .++||.|+||..|+. ...+||.|+..|...+..
T Consensus 14 ~~~~C~IC~~~~~~--~~~~CgH~fc~~Ci~~~~~~~~~CP~Cr~~~~~~~~~ 64 (70)
T 2ecn_A 14 DEEECCICMDGRAD--LILPCAHSFCQKCIDKWSDRHRNCPICRLQMTGANES 64 (70)
T ss_dssp CCCCCSSSCCSCCS--EEETTTEEECHHHHHHSSCCCSSCHHHHHCTTCCCCC
T ss_pred CCCCCeeCCcCccC--cccCCCCcccHHHHHHHHHCcCcCCCcCCcccCCCcc
Confidence 36889999988887 788999999999998 457899999999766543
No 9
>1rmd_A RAG1; V(D)J recombination, antibody, MAD, ring finger, zinc binuclear cluster, zinc finger, DNA-binding protein; 2.10A {Mus musculus} SCOP: g.37.1.1 g.44.1.1
Probab=98.35 E-value=6.2e-08 Score=79.28 Aligned_cols=77 Identities=19% Similarity=0.387 Sum_probs=59.1
Q ss_pred cccccCCCccccccccccccccccchhhhh-----CCCCcccchHhHhhheeeecC--------CcEEEecCCchhhhhc
Q 011117 69 VHFCVRCDYPIAIYGRLNPCEHVFCLDCAR-----SDSMCYLCDERIQKIQTIKLM--------EGIFICAAPHCLKSFL 135 (493)
Q Consensus 69 vhFCdICdlPI~iygRmIPCKHVFCydCA~-----sDktCP~Cna~VqrIEri~p~--------esIFIC~~~gCkRtYL 135 (493)
.+.|+||...+...+. ++|+|+||..|+. ...+||.|+..+...+....+ +-...|...+|... +
T Consensus 23 ~~~C~IC~~~~~~p~~-~~CgH~fC~~Ci~~~~~~~~~~CP~Cr~~~~~~~~~~~~~~l~~~i~~l~v~C~~~gC~~~-~ 100 (116)
T 1rmd_A 23 SISCQICEHILADPVE-TSCKHLFCRICILRCLKVMGSYCPSCRYPCFPTDLESPVKSFLNILNSLMVKCPAQDCNEE-V 100 (116)
T ss_dssp HTBCTTTCSBCSSEEE-CTTSCEEEHHHHHHHHHHTCSBCTTTCCBCCGGGCBCCCHHHHHHHHHCEEECCSTTCCCE-E
T ss_pred CCCCCCCCcHhcCcEE-cCCCCcccHHHHHHHHhHCcCcCCCCCCCCCHhhccccHHHHHHHHHHhcCCCCCCCCcch-h
Confidence 5789999999988876 6899999999997 357899999998754422211 12457888899765 5
Q ss_pred ChhHHHHhhhhh
Q 011117 136 KKTEFEAHIHVS 147 (493)
Q Consensus 136 SqRDLQAHInhr 147 (493)
...+|+.|.+..
T Consensus 101 ~~~~~~~H~~~C 112 (116)
T 1rmd_A 101 SLEKYNHHVSSH 112 (116)
T ss_dssp EHHHHHHHHHTS
T ss_pred hHhHHHHHHHHh
Confidence 688899998643
No 10
>2d8t_A Dactylidin, ring finger protein 146; RNF146, ring domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=98.33 E-value=1e-07 Score=72.09 Aligned_cols=46 Identities=30% Similarity=0.585 Sum_probs=37.9
Q ss_pred ccccccCCCccccccccccccccccchhhhh----CCCCcccchHhHhhhe
Q 011117 68 RVHFCVRCDYPIAIYGRLNPCEHVFCLDCAR----SDSMCYLCDERIQKIQ 114 (493)
Q Consensus 68 KvhFCdICdlPI~iygRmIPCKHVFCydCA~----sDktCP~Cna~VqrIE 114 (493)
....|.||...+...+. ++|.|+||++|+. ...+||+|+..|..-+
T Consensus 14 ~~~~C~IC~~~~~~~~~-~~CgH~fC~~Ci~~~~~~~~~CP~Cr~~~~~~~ 63 (71)
T 2d8t_A 14 TVPECAICLQTCVHPVS-LPCKHVFCYLCVKGASWLGKRCALCRQEIPEDF 63 (71)
T ss_dssp SCCBCSSSSSBCSSEEE-ETTTEEEEHHHHHHCTTCSSBCSSSCCBCCHHH
T ss_pred CCCCCccCCcccCCCEE-ccCCCHHHHHHHHHHHHCCCcCcCcCchhCHhh
Confidence 46789999988887754 5899999999998 3478999999987544
No 11
>2ckl_A Polycomb group ring finger protein 4; BMI1, RING1B, polycomb, E3-ligase, nuclear protein, chromosomal protein, transcription regulation; 2.0A {Mus musculus} PDB: 3rpg_B 2h0d_A
Probab=98.33 E-value=1.3e-07 Score=76.71 Aligned_cols=46 Identities=26% Similarity=0.587 Sum_probs=40.1
Q ss_pred ccccccCCCccccccccccccccccchhhhh----CCCCcccchHhHhhh
Q 011117 68 RVHFCVRCDYPIAIYGRLNPCEHVFCLDCAR----SDSMCYLCDERIQKI 113 (493)
Q Consensus 68 KvhFCdICdlPI~iygRmIPCKHVFCydCA~----sDktCP~Cna~VqrI 113 (493)
..+.|+||...+...+.+.+|+|+||..|+. ...+||.|+..+...
T Consensus 14 ~~~~C~IC~~~~~~p~~~~~CgH~fC~~Ci~~~~~~~~~CP~Cr~~~~~~ 63 (108)
T 2ckl_A 14 PHLMCVLCGGYFIDATTIIECLHSFCKTCIVRYLETSKYCPICDVQVHKT 63 (108)
T ss_dssp GGTBCTTTSSBCSSEEEETTTCCEEEHHHHHHHHTSCSBCTTTCCBSCSS
T ss_pred CcCCCccCChHHhCcCEeCCCCChhhHHHHHHHHHhCCcCcCCCcccccc
Confidence 3689999999999988888999999999998 347899999988653
No 12
>2ep4_A Ring finger protein 24; zinc binding, ubiquitin, E3 enzyme, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=98.30 E-value=1.2e-07 Score=71.57 Aligned_cols=49 Identities=20% Similarity=0.520 Sum_probs=39.9
Q ss_pred cccccCCCcccccc--ccccccccccchhhhh----CCCCcccchHhHhhheeee
Q 011117 69 VHFCVRCDYPIAIY--GRLNPCEHVFCLDCAR----SDSMCYLCDERIQKIQTIK 117 (493)
Q Consensus 69 vhFCdICdlPI~iy--gRmIPCKHVFCydCA~----sDktCP~Cna~VqrIEri~ 117 (493)
...|.||...+... .+.++|+|+||.+|+. ...+||+|+..|..+.++.
T Consensus 15 ~~~C~IC~~~~~~~~~~~~~~C~H~f~~~Ci~~~~~~~~~CP~Cr~~~~~~~~~~ 69 (74)
T 2ep4_A 15 HELCAVCLEDFKPRDELGICPCKHAFHRKCLIKWLEVRKVCPLCNMPVLQLAQLS 69 (74)
T ss_dssp SCBCSSSCCBCCSSSCEEEETTTEEEEHHHHHHHHHHCSBCTTTCCBCSSCCSCC
T ss_pred CCCCcCCCcccCCCCcEEEcCCCCEecHHHHHHHHHcCCcCCCcCcccccccccC
Confidence 57899999887644 3344999999999998 4579999999998877664
No 13
>2y43_A E3 ubiquitin-protein ligase RAD18; DNA repair, metal-binding, translesion synthesis, UB conjugation pathway; 1.80A {Homo sapiens}
Probab=98.30 E-value=1.3e-07 Score=75.53 Aligned_cols=45 Identities=22% Similarity=0.444 Sum_probs=39.3
Q ss_pred ccccccCCCccccccccccccccccchhhhh----CCCCcccchHhHhh
Q 011117 68 RVHFCVRCDYPIAIYGRLNPCEHVFCLDCAR----SDSMCYLCDERIQK 112 (493)
Q Consensus 68 KvhFCdICdlPI~iygRmIPCKHVFCydCA~----sDktCP~Cna~Vqr 112 (493)
..+.|+||...+...+.+.+|+|+||..|+. ...+||.|+..+..
T Consensus 21 ~~~~C~IC~~~~~~p~~~~~CgH~fC~~Ci~~~~~~~~~CP~Cr~~~~~ 69 (99)
T 2y43_A 21 DLLRCGICFEYFNIAMIIPQCSHNYCSLCIRKFLSYKTQCPTCCVTVTE 69 (99)
T ss_dssp HHTBCTTTCSBCSSEEECTTTCCEEEHHHHHHHHTTCCBCTTTCCBCCG
T ss_pred CCCCcccCChhhCCcCEECCCCCHhhHHHHHHHHHCCCCCCCCCCcCCh
Confidence 3688999999999988887999999999997 35789999998864
No 14
>2ect_A Ring finger protein 126; metal binding protein, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus}
Probab=98.29 E-value=1.4e-07 Score=71.98 Aligned_cols=47 Identities=23% Similarity=0.466 Sum_probs=38.1
Q ss_pred ccccccCCCcccccc--ccccccccccchhhhh----CCCCcccchHhHhhhe
Q 011117 68 RVHFCVRCDYPIAIY--GRLNPCEHVFCLDCAR----SDSMCYLCDERIQKIQ 114 (493)
Q Consensus 68 KvhFCdICdlPI~iy--gRmIPCKHVFCydCA~----sDktCP~Cna~VqrIE 114 (493)
....|.||...|... .+.++|+|+||.+|+. ...+||+|+..|...+
T Consensus 14 ~~~~C~IC~~~~~~~~~~~~~~C~H~fc~~Ci~~~~~~~~~CP~Cr~~~~~~~ 66 (78)
T 2ect_A 14 SGLECPVCKEDYALGESVRQLPCNHLFHDSCIVPWLEQHDSCPVCRKSLTGQN 66 (78)
T ss_dssp SSCCCTTTTSCCCTTSCEEECTTSCEEETTTTHHHHTTTCSCTTTCCCCCCSC
T ss_pred CCCCCeeCCccccCCCCEEEeCCCCeecHHHHHHHHHcCCcCcCcCCccCCcc
Confidence 467899998887643 4557999999999998 4578999999987544
No 15
>2ea6_A Ring finger protein 4; RNF4, RES4-26, ring domain, zinc- binding domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=98.28 E-value=1.2e-07 Score=69.68 Aligned_cols=45 Identities=27% Similarity=0.561 Sum_probs=37.4
Q ss_pred cccccccCCCccccccc------cccccccccchhhhh----CCCCcccchHhHh
Q 011117 67 ERVHFCVRCDYPIAIYG------RLNPCEHVFCLDCAR----SDSMCYLCDERIQ 111 (493)
Q Consensus 67 EKvhFCdICdlPI~iyg------RmIPCKHVFCydCA~----sDktCP~Cna~Vq 111 (493)
+....|.||...+.... .+++|.|+||.+|+. ...+||+|+..|.
T Consensus 13 ~~~~~C~IC~~~~~~~~~~~~~~~~~~CgH~fc~~Ci~~~~~~~~~CP~Cr~~~~ 67 (69)
T 2ea6_A 13 SGTVSCPICMDGYSEIVQNGRLIVSTECGHVFCSQCLRDSLKNANTCPTCRKKIN 67 (69)
T ss_dssp TCCCCCTTTCCCHHHHTTTTCCEEECSSSCEEEHHHHHHHHHHCSSCTTTCCCCC
T ss_pred CCCCCCcccCccccccccccCCeEeCCCCChhcHHHHHHHHHcCCCCCCCCCccC
Confidence 34688999998887752 678999999999998 4578999998764
No 16
>2ysl_A Tripartite motif-containing protein 31; ring-type zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=98.28 E-value=1.9e-07 Score=70.05 Aligned_cols=43 Identities=26% Similarity=0.552 Sum_probs=36.2
Q ss_pred ccccccCCCccccccccccccccccchhhhh---C----CCCcccchHhHh
Q 011117 68 RVHFCVRCDYPIAIYGRLNPCEHVFCLDCAR---S----DSMCYLCDERIQ 111 (493)
Q Consensus 68 KvhFCdICdlPI~iygRmIPCKHVFCydCA~---s----DktCP~Cna~Vq 111 (493)
..+.|+||...+.....+ +|.|+||.+|+. . ..+||.|+..|.
T Consensus 19 ~~~~C~IC~~~~~~~~~~-~CgH~fC~~Ci~~~~~~~~~~~~CP~Cr~~~~ 68 (73)
T 2ysl_A 19 EEVICPICLDILQKPVTI-DCGHNFCLKCITQIGETSCGFFKCPLCKTSVR 68 (73)
T ss_dssp CCCBCTTTCSBCSSEEEC-TTCCEEEHHHHHHHCSSSCSCCCCSSSCCCCC
T ss_pred cCCEeccCCcccCCeEEc-CCCChhhHHHHHHHHHcCCCCCCCCCCCCcCC
Confidence 468999999988887765 999999999998 1 248999999874
No 17
>3ng2_A RNF4, snurf, ring finger protein 4; ring domain, E3 ligase, ubiquitylation, sumoylation, zinc-FI metal binding protein; 1.80A {Rattus norvegicus}
Probab=98.27 E-value=1.3e-07 Score=70.39 Aligned_cols=47 Identities=26% Similarity=0.526 Sum_probs=39.3
Q ss_pred cccccccCCCccccccc------cccccccccchhhhh----CCCCcccchHhHhhh
Q 011117 67 ERVHFCVRCDYPIAIYG------RLNPCEHVFCLDCAR----SDSMCYLCDERIQKI 113 (493)
Q Consensus 67 EKvhFCdICdlPI~iyg------RmIPCKHVFCydCA~----sDktCP~Cna~VqrI 113 (493)
+....|.||-..+.... .+.+|+|+||.+|+. ...+||.|+..+..-
T Consensus 8 ~~~~~C~IC~~~~~~~~~~~~~~~~~~CgH~fc~~Ci~~~~~~~~~CP~Cr~~~~~~ 64 (71)
T 3ng2_A 8 SGTVSCPICMDGYSEIVQNGRLIVSTECGHVFCSQCLRDSLKNANTCPTCRKKINHK 64 (71)
T ss_dssp TTCCBCTTTCCBHHHHHTTTCCEEECTTSCEEEHHHHHHHHHHCSBCTTTCCBCCCC
T ss_pred CCCCCCcccChhhhccccccCCeEeCCCCChHhHHHHHHHHHcCCCCCCCCCccChh
Confidence 44688999998887763 788999999999997 457999999998643
No 18
>1bor_A Transcription factor PML; proto-oncogene, nuclear bodies (PODS), leukemia, transcription regulation; NMR {Homo sapiens} SCOP: g.44.1.1
Probab=98.27 E-value=2.5e-07 Score=68.12 Aligned_cols=43 Identities=26% Similarity=0.629 Sum_probs=36.9
Q ss_pred ccccccCCCccccccccccccccccchhhhh-CCCCcccchHhHh
Q 011117 68 RVHFCVRCDYPIAIYGRLNPCEHVFCLDCAR-SDSMCYLCDERIQ 111 (493)
Q Consensus 68 KvhFCdICdlPI~iygRmIPCKHVFCydCA~-sDktCP~Cna~Vq 111 (493)
..+.|.||...+... +++||+|+||..|+. ...+||.|+..+.
T Consensus 5 ~~~~C~IC~~~~~~p-~~l~CgH~fC~~Ci~~~~~~CP~Cr~~~~ 48 (56)
T 1bor_A 5 QFLRCQQCQAEAKCP-KLLPCLHTLCSGCLEASGMQCPICQAPWP 48 (56)
T ss_dssp CCSSCSSSCSSCBCC-SCSTTSCCSBTTTCSSSSSSCSSCCSSSS
T ss_pred cCCCceEeCCccCCe-EEcCCCCcccHHHHccCCCCCCcCCcEee
Confidence 468899999888876 567899999999998 4578999999874
No 19
>2csy_A Zinc finger protein 183-like 1; ring finger protein 161, ring domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=98.26 E-value=1.8e-07 Score=72.23 Aligned_cols=43 Identities=28% Similarity=0.673 Sum_probs=37.4
Q ss_pred ccccccCCCccccccccccccccccchhhhh----CCCCcccchHhHh
Q 011117 68 RVHFCVRCDYPIAIYGRLNPCEHVFCLDCAR----SDSMCYLCDERIQ 111 (493)
Q Consensus 68 KvhFCdICdlPI~iygRmIPCKHVFCydCA~----sDktCP~Cna~Vq 111 (493)
..+.|.||...+...+ +++|.|+||+.|+. ...+||.|+..+.
T Consensus 14 ~~~~C~IC~~~~~~p~-~~~CgH~fC~~Ci~~~~~~~~~CP~Cr~~~~ 60 (81)
T 2csy_A 14 IPFRCFICRQAFQNPV-VTKCRHYFCESCALEHFRATPRCYICDQPTG 60 (81)
T ss_dssp CCSBCSSSCSBCCSEE-ECTTSCEEEHHHHHHHHHHCSBCSSSCCBCC
T ss_pred CCCCCcCCCchhcCee-EccCCCHhHHHHHHHHHHCCCcCCCcCcccc
Confidence 4689999999988876 57999999999997 4578999999885
No 20
>2egp_A Tripartite motif-containing protein 34; ZF-C3HC4 domain, tripartite motif protein 34, interferon- responsive finger protein 1; NMR {Homo sapiens}
Probab=98.26 E-value=2.1e-07 Score=70.51 Aligned_cols=44 Identities=20% Similarity=0.350 Sum_probs=36.8
Q ss_pred ccccccCCCccccccccccccccccchhhhhC-----------CCCcccchHhHhh
Q 011117 68 RVHFCVRCDYPIAIYGRLNPCEHVFCLDCARS-----------DSMCYLCDERIQK 112 (493)
Q Consensus 68 KvhFCdICdlPI~iygRmIPCKHVFCydCA~s-----------DktCP~Cna~Vqr 112 (493)
..+.|+||...+..... ++|.|+||.+|+.. ..+||.|+..+..
T Consensus 11 ~~~~C~IC~~~~~~p~~-l~CgH~fC~~Ci~~~~~~~~~~~~~~~~CP~Cr~~~~~ 65 (79)
T 2egp_A 11 EEVTCPICLELLTEPLS-LDCGHSLCRACITVSNKEAVTSMGGKSSCPVCGISYSF 65 (79)
T ss_dssp CCCEETTTTEECSSCCC-CSSSCCCCHHHHSCCCCCCSSSCCCCCCCSSSCCCCCS
T ss_pred cCCCCcCCCcccCCeeE-CCCCCHHHHHHHHHHHHhcccCCCCCCcCCCCCCcCCH
Confidence 46889999988888665 68999999999981 4689999998853
No 21
>3lrq_A E3 ubiquitin-protein ligase TRIM37; structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG; HET: MSE; 2.29A {Homo sapiens}
Probab=98.26 E-value=1.8e-07 Score=75.66 Aligned_cols=44 Identities=23% Similarity=0.535 Sum_probs=38.5
Q ss_pred ccccccCCCccccccccccccccccchhhhh----CC-CCcccchHhHh
Q 011117 68 RVHFCVRCDYPIAIYGRLNPCEHVFCLDCAR----SD-SMCYLCDERIQ 111 (493)
Q Consensus 68 KvhFCdICdlPI~iygRmIPCKHVFCydCA~----sD-ktCP~Cna~Vq 111 (493)
..+.|.||...+..++.+++|+|+||+.|+. .. .+||.|+..+.
T Consensus 21 ~~~~C~IC~~~~~~p~~~~~CgH~FC~~Ci~~~~~~~~~~CP~Cr~~~~ 69 (100)
T 3lrq_A 21 EVFRCFICMEKLRDARLCPHCSKLCCFSCIRRWLTEQRAQCPHCRAPLQ 69 (100)
T ss_dssp HHTBCTTTCSBCSSEEECTTTCCEEEHHHHHHHHHHTCSBCTTTCCBCC
T ss_pred CCCCCccCCccccCccccCCCCChhhHHHHHHHHHHCcCCCCCCCCcCC
Confidence 3688999999999988779999999999998 23 68999999984
No 22
>2ecy_A TNF receptor-associated factor 3; metal binding protein, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=98.25 E-value=2.4e-07 Score=68.97 Aligned_cols=44 Identities=30% Similarity=0.655 Sum_probs=37.2
Q ss_pred ccccccCCCccccccccccccccccchhhhh-----CCCCcccchHhHhh
Q 011117 68 RVHFCVRCDYPIAIYGRLNPCEHVFCLDCAR-----SDSMCYLCDERIQK 112 (493)
Q Consensus 68 KvhFCdICdlPI~iygRmIPCKHVFCydCA~-----sDktCP~Cna~Vqr 112 (493)
..+.|+||...+..... ++|.|+||..|+. ...+||.|+..|..
T Consensus 14 ~~~~C~IC~~~~~~p~~-~~CgH~fC~~Ci~~~~~~~~~~CP~Cr~~~~~ 62 (66)
T 2ecy_A 14 DKYKCEKCHLVLCSPKQ-TECGHRFCESCMAALLSSSSPKCTACQESIVK 62 (66)
T ss_dssp CCEECTTTCCEESSCCC-CSSSCCCCHHHHHHHHTTSSCCCTTTCCCCCT
T ss_pred cCCCCCCCChHhcCeeE-CCCCCHHHHHHHHHHHHhCcCCCCCCCcCCCh
Confidence 36889999999988776 6899999999998 24689999998743
No 23
>2ecw_A Tripartite motif-containing protein 30; metal binding protein, structural genomics, NPPSFA; NMR {Mus musculus}
Probab=98.25 E-value=2.2e-07 Score=70.47 Aligned_cols=44 Identities=23% Similarity=0.406 Sum_probs=37.1
Q ss_pred ccccccCCCccccccccccccccccchhhhh----C------CCCcccchHhHhh
Q 011117 68 RVHFCVRCDYPIAIYGRLNPCEHVFCLDCAR----S------DSMCYLCDERIQK 112 (493)
Q Consensus 68 KvhFCdICdlPI~iygRmIPCKHVFCydCA~----s------DktCP~Cna~Vqr 112 (493)
..+.|.||...+.... +++|.|+||..|+. . ..+||.|+..+..
T Consensus 18 ~~~~C~IC~~~~~~p~-~~~CgH~fC~~Ci~~~~~~~~~~~~~~~CP~Cr~~~~~ 71 (85)
T 2ecw_A 18 EEVTCPICLELLKEPV-SADCNHSFCRACITLNYESNRNTDGKGNCPVCRVPYPF 71 (85)
T ss_dssp TTTSCTTTCSCCSSCE-ECTTSCCBCHHHHHHHHHHSBCTTSCBCCTTTCCCCCT
T ss_pred cCCCCcCCChhhCcce-eCCCCCHHHHHHHHHHHHhccCCCCCCCCCCCCCcCCH
Confidence 3678999999888877 56899999999998 2 5689999998763
No 24
>2ecv_A Tripartite motif-containing protein 5; metal binding protein, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=98.25 E-value=2.4e-07 Score=70.18 Aligned_cols=44 Identities=25% Similarity=0.456 Sum_probs=37.2
Q ss_pred ccccccCCCccccccccccccccccchhhhh----C------CCCcccchHhHhh
Q 011117 68 RVHFCVRCDYPIAIYGRLNPCEHVFCLDCAR----S------DSMCYLCDERIQK 112 (493)
Q Consensus 68 KvhFCdICdlPI~iygRmIPCKHVFCydCA~----s------DktCP~Cna~Vqr 112 (493)
..+.|+||...+..... ++|.|+||..|+. . ..+||.|+..+..
T Consensus 18 ~~~~C~IC~~~~~~p~~-~~CgH~fC~~Ci~~~~~~~~~~~~~~~CP~Cr~~~~~ 71 (85)
T 2ecv_A 18 EEVTCPICLELLTQPLS-LDCGHSFCQACLTANHKKSMLDKGESSCPVCRISYQP 71 (85)
T ss_dssp CCCCCTTTCSCCSSCBC-CSSSCCBCTTHHHHHHHHHHHTTSCCCCTTTCCSSCS
T ss_pred CCCCCCCCCcccCCcee-CCCCCHHHHHHHHHHHHHhhcCCCCCcCCCCCCccCH
Confidence 36899999998888765 5899999999997 2 5789999998874
No 25
>2kiz_A E3 ubiquitin-protein ligase arkadia; ring-H2 finger, E3 ligase, Zn binding domain, metal zinc, zinc-finger, metal binding protein; NMR {Homo sapiens}
Probab=98.23 E-value=2.3e-07 Score=69.27 Aligned_cols=45 Identities=24% Similarity=0.489 Sum_probs=37.1
Q ss_pred ccccccCCCcccc--ccccccccccccchhhhh----CCCCcccchHhHhh
Q 011117 68 RVHFCVRCDYPIA--IYGRLNPCEHVFCLDCAR----SDSMCYLCDERIQK 112 (493)
Q Consensus 68 KvhFCdICdlPI~--iygRmIPCKHVFCydCA~----sDktCP~Cna~Vqr 112 (493)
....|.||...|. ...+.+||+|+||.+|+. ...+||+|+..|..
T Consensus 13 ~~~~C~IC~~~~~~~~~~~~~~C~H~fc~~Ci~~~~~~~~~CP~Cr~~~~~ 63 (69)
T 2kiz_A 13 TEEKCTICLSILEEGEDVRRLPCMHLFHQVCVDQWLITNKKCPICRVDIEA 63 (69)
T ss_dssp CCCSBTTTTBCCCSSSCEEECTTSCEEEHHHHHHHHHHCSBCTTTCSBSCS
T ss_pred CCCCCeeCCccccCCCcEEEeCCCCHHHHHHHHHHHHcCCCCcCcCccccC
Confidence 3678999987775 446778999999999998 45789999988754
No 26
>3fl2_A E3 ubiquitin-protein ligase UHRF1; cell cycle, DNA damage, DNA repair, ring finger domain, metal binding, DNA replication; 1.75A {Homo sapiens}
Probab=98.22 E-value=3.1e-07 Score=76.16 Aligned_cols=45 Identities=20% Similarity=0.424 Sum_probs=37.3
Q ss_pred cccccCCCccccccccccccccccchhhhh-----CCCCcccchHhHhhhe
Q 011117 69 VHFCVRCDYPIAIYGRLNPCEHVFCLDCAR-----SDSMCYLCDERIQKIQ 114 (493)
Q Consensus 69 vhFCdICdlPI~iygRmIPCKHVFCydCA~-----sDktCP~Cna~VqrIE 114 (493)
.+.|+||...+...+. ++|+|+||..|+. ...+||.|+..+....
T Consensus 52 ~~~C~IC~~~~~~p~~-~~CgH~fC~~Ci~~~~~~~~~~CP~Cr~~~~~~~ 101 (124)
T 3fl2_A 52 TFQCICCQELVFRPIT-TVCQHNVCKDCLDRSFRAQVFSCPACRYDLGRSY 101 (124)
T ss_dssp HTBCTTTSSBCSSEEE-CTTSCEEEHHHHHHHHHTTCCBCTTTCCBCCTTC
T ss_pred CCCCCcCChHHcCcEE-eeCCCcccHHHHHHHHhHCcCCCCCCCccCCCCC
Confidence 5789999988888765 5999999999997 3358999999986533
No 27
>2ecg_A Baculoviral IAP repeat-containing protein 4; BIRC4, ring domian, zinc-binding domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=98.21 E-value=1.6e-07 Score=72.53 Aligned_cols=48 Identities=27% Similarity=0.521 Sum_probs=39.5
Q ss_pred ccccccCCCccccccccccccccc-cchhhhhCCCCcccchHhHhhheee
Q 011117 68 RVHFCVRCDYPIAIYGRLNPCEHV-FCLDCARSDSMCYLCDERIQKIQTI 116 (493)
Q Consensus 68 KvhFCdICdlPI~iygRmIPCKHV-FCydCA~sDktCP~Cna~VqrIEri 116 (493)
....|.||...+... .++||.|+ ||..|+....+||+|+..|..+.++
T Consensus 24 ~~~~C~IC~~~~~~~-~~~pCgH~~~C~~C~~~~~~CP~Cr~~i~~~~~i 72 (75)
T 2ecg_A 24 EEKLCKICMDRNIAI-VFVPCGHLVTCKQCAEAVDKCPMCYTVITFKQKI 72 (75)
T ss_dssp HHHSCSSSCSSCCCB-CCSSSCCCCBCHHHHHHCSBCTTTCCBCCCCCBC
T ss_pred CCCCCCcCCCCCCCE-EEecCCCHHHHHHHhhCCCCCccCCceecCcEEE
Confidence 357899998776664 46799999 9999999889999999999765443
No 28
>4ap4_A E3 ubiquitin ligase RNF4; ligase-signalling protein complex, chimera; 2.21A {Rattus norvegicus}
Probab=98.20 E-value=2.6e-07 Score=74.90 Aligned_cols=67 Identities=24% Similarity=0.551 Sum_probs=50.6
Q ss_pred cccccccCCCccccccc------cccccccccchhhhh----CCCCcccchHhHhhhe--eeecCCcEEEecCCchhhhh
Q 011117 67 ERVHFCVRCDYPIAIYG------RLNPCEHVFCLDCAR----SDSMCYLCDERIQKIQ--TIKLMEGIFICAAPHCLKSF 134 (493)
Q Consensus 67 EKvhFCdICdlPI~iyg------RmIPCKHVFCydCA~----sDktCP~Cna~VqrIE--ri~p~esIFIC~~~gCkRtY 134 (493)
.....|+||-..+.... ++++|.|+||.+|+. ...+||.|+..+...+ .+..+++.+.|+. |+..|
T Consensus 5 ~~~~~C~IC~~~~~~~~~~~~~~~~~~CgH~fc~~Ci~~~~~~~~~CP~Cr~~~~~~~l~~l~i~~~~~~C~i--C~~~~ 82 (133)
T 4ap4_A 5 SGTVSCPICMDGYSEIVQNGRLIVSTECGHVFCSQCLRDSLKNANTCPTCRKKINHKRYHPIYIGSGTVSCPI--CMDGY 82 (133)
T ss_dssp CCSCBCTTTCCBHHHHHHTTCCEEEETTCCEEEHHHHHHHHTTCSBCTTTCCBCTTTCEEECBCSSSSCBCTT--TCCBH
T ss_pred CCCCCCcccChhhhCccccccCeEecCCCChhhHHHHHHHHHhCCCCCCCCCcCccccccccccCCCCCCCCC--CCCcc
Confidence 45689999999888762 778999999999997 4578999999987443 3555666777753 55554
Q ss_pred c
Q 011117 135 L 135 (493)
Q Consensus 135 L 135 (493)
.
T Consensus 83 ~ 83 (133)
T 4ap4_A 83 S 83 (133)
T ss_dssp H
T ss_pred c
Confidence 3
No 29
>2xeu_A Ring finger protein 4; transcription, zinc-finger, metal-binding; HET: SUC; 1.50A {Homo sapiens}
Probab=98.20 E-value=2.8e-07 Score=66.87 Aligned_cols=46 Identities=26% Similarity=0.566 Sum_probs=38.3
Q ss_pred cccccCCCccccccc------cccccccccchhhhh----CCCCcccchHhHhhhe
Q 011117 69 VHFCVRCDYPIAIYG------RLNPCEHVFCLDCAR----SDSMCYLCDERIQKIQ 114 (493)
Q Consensus 69 vhFCdICdlPI~iyg------RmIPCKHVFCydCA~----sDktCP~Cna~VqrIE 114 (493)
...|+||...+.... .+.+|+|+||.+|+. ...+||.|+..+..-+
T Consensus 3 ~~~C~IC~~~~~~~~~~~~~~~~~~CgH~fc~~Ci~~~~~~~~~CP~Cr~~~~~~~ 58 (64)
T 2xeu_A 3 MVSCPICMDGYSEIVQNGRLIVSTECGHVFCSQCLRDSLKNANTCPTCRKKINHKR 58 (64)
T ss_dssp CCBCTTTCCBHHHHHHTTCCEEEETTSCEEEHHHHHHHHHHCSBCTTTCCBCTTTC
T ss_pred CCCCCccChhhhCccccCCCEEeCCCCCchhHHHHHHHHHcCCCCCCCCccCCccc
Confidence 468999998887753 678999999999997 5679999999987543
No 30
>3l11_A E3 ubiquitin-protein ligase RNF168; E3 ligase, ring domain, DNA damage, chromatin regulator, CHR protein, DNA repair, metal-binding, nucleus; 2.12A {Homo sapiens}
Probab=98.19 E-value=2.8e-07 Score=75.34 Aligned_cols=46 Identities=24% Similarity=0.523 Sum_probs=38.4
Q ss_pred cccccccCCCccccccccccccccccchhhhh-----CCCCcccchHhHhhh
Q 011117 67 ERVHFCVRCDYPIAIYGRLNPCEHVFCLDCAR-----SDSMCYLCDERIQKI 113 (493)
Q Consensus 67 EKvhFCdICdlPI~iygRmIPCKHVFCydCA~-----sDktCP~Cna~VqrI 113 (493)
+..+.|+||...+...+.+ +|+|+||..|+. ...+||.|+..+...
T Consensus 13 ~~~~~C~iC~~~~~~p~~~-~CgH~fC~~Ci~~~~~~~~~~CP~Cr~~~~~~ 63 (115)
T 3l11_A 13 LSECQCGICMEILVEPVTL-PCNHTLCKPCFQSTVEKASLCCPFCRRRVSSW 63 (115)
T ss_dssp HHHHBCTTTCSBCSSCEEC-TTSCEECHHHHCCCCCTTTSBCTTTCCBCHHH
T ss_pred CCCCCCccCCcccCceeEc-CCCCHHhHHHHHHHHhHCcCCCCCCCcccCcc
Confidence 3468999999888887765 899999999997 246899999998763
No 31
>2ecm_A Ring finger and CHY zinc finger domain- containing protein 1; RCHY1, ring domain, zinc-binding domain, structural genomics, NPPSFA; NMR {Mus musculus} PDB: 2jrj_A
Probab=98.18 E-value=3.7e-07 Score=65.06 Aligned_cols=44 Identities=23% Similarity=0.437 Sum_probs=36.3
Q ss_pred ccccccCCCccccc---cccccccccccchhhhh----CCCCcccchHhHh
Q 011117 68 RVHFCVRCDYPIAI---YGRLNPCEHVFCLDCAR----SDSMCYLCDERIQ 111 (493)
Q Consensus 68 KvhFCdICdlPI~i---ygRmIPCKHVFCydCA~----sDktCP~Cna~Vq 111 (493)
....|.||...+.. ..++++|.|+||.+|+. ...+||+|+..|.
T Consensus 4 ~~~~C~IC~~~~~~~~~~~~~~~CgH~fc~~Ci~~~~~~~~~CP~Cr~~~~ 54 (55)
T 2ecm_A 4 GSSGCPICLEDIHTSRVVAHVLPCGHLLHRTCYEEMLKEGYRCPLCSGPSS 54 (55)
T ss_dssp CCCSCTTTCCCCCTTTSCEEECTTSCEEETTHHHHHHHHTCCCTTSCCSSC
T ss_pred CCCcCcccChhhcCCCcCeEecCCCCcccHHHHHHHHHcCCcCCCCCCcCC
Confidence 35789999988755 46788999999999998 4588999998763
No 32
>3hcs_A TNF receptor-associated factor 6; cross-brace, beta-BETA-alpha, coiled coil, cytoplasm, metal- binding, UBL conjugation, UBL conjugation pathway; 2.20A {Homo sapiens}
Probab=98.18 E-value=3.4e-07 Score=79.40 Aligned_cols=77 Identities=21% Similarity=0.409 Sum_probs=58.0
Q ss_pred ccccccCCCccccccccccccccccchhhhh-----CCCCcccchHhHhhhe--------eeecCCcEEEecCCchhhhh
Q 011117 68 RVHFCVRCDYPIAIYGRLNPCEHVFCLDCAR-----SDSMCYLCDERIQKIQ--------TIKLMEGIFICAAPHCLKSF 134 (493)
Q Consensus 68 KvhFCdICdlPI~iygRmIPCKHVFCydCA~-----sDktCP~Cna~VqrIE--------ri~p~esIFIC~~~gCkRtY 134 (493)
..+.|+||...+..++. ++|.|+||..|+. +..+||.|+..|..-+ +. ..+-...|...+|....
T Consensus 17 ~~~~C~IC~~~~~~pv~-~~CgH~fC~~Ci~~~~~~~~~~CP~Cr~~~~~~~~~~~~~~~~~-i~~l~v~C~n~GC~~~~ 94 (170)
T 3hcs_A 17 SKYECPICLMALREAVQ-TPCGHRFCKACIIKSIRDAGHKCPVDNEILLENQLFPDNFAKRE-ILSLMVKCPNEGCLHKM 94 (170)
T ss_dssp GGGBCTTTCSBCSSEEE-CTTSCEEEHHHHHHHHHHHCSBCTTTCCBCCGGGCEECHHHHHH-HHTSEEECCSTTCCCEE
T ss_pred CCCCCCCCChhhcCcEE-CCCCCHHHHHHHHHHHHhCCCCCCCCccCcchhhhhhhHHHHHH-HhhcccCCCCCCCCcee
Confidence 36899999999999876 5899999999997 2359999998876532 21 12346789888887754
Q ss_pred cChhHHHHhhhhh
Q 011117 135 LKKTEFEAHIHVS 147 (493)
Q Consensus 135 LSqRDLQAHInhr 147 (493)
...+|+.|.+..
T Consensus 95 -~~~~l~~H~~~C 106 (170)
T 3hcs_A 95 -ELRHLEDHQAHC 106 (170)
T ss_dssp -EGGGHHHHHTTC
T ss_pred -cHhHHHHHHhcC
Confidence 567788887543
No 33
>1x4j_A Ring finger protein 38; structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=98.17 E-value=2.8e-07 Score=70.18 Aligned_cols=44 Identities=25% Similarity=0.603 Sum_probs=36.6
Q ss_pred ccccccCCCcccccc--ccccccccccchhhhh----CCCCcccchHhHh
Q 011117 68 RVHFCVRCDYPIAIY--GRLNPCEHVFCLDCAR----SDSMCYLCDERIQ 111 (493)
Q Consensus 68 KvhFCdICdlPI~iy--gRmIPCKHVFCydCA~----sDktCP~Cna~Vq 111 (493)
....|.||...+... ++.+||+|+||.+|+. ...+||+|+..|.
T Consensus 22 ~~~~C~IC~~~~~~~~~~~~l~C~H~fh~~Ci~~w~~~~~~CP~Cr~~~~ 71 (75)
T 1x4j_A 22 EQTLCVVCMCDFESRQLLRVLPCNHEFHAKCVDKWLKANRTCPICRADSG 71 (75)
T ss_dssp SCCEETTTTEECCBTCEEEEETTTEEEETTHHHHHHHHCSSCTTTCCCCC
T ss_pred CCCCCeECCcccCCCCeEEEECCCCHhHHHHHHHHHHcCCcCcCcCCcCC
Confidence 467899999777654 5778999999999998 4579999998774
No 34
>3ztg_A E3 ubiquitin-protein ligase RBBP6; PACT, U-BOX, mRNA processing, mRNA splicing; NMR {Homo sapiens}
Probab=98.16 E-value=4e-07 Score=71.37 Aligned_cols=46 Identities=20% Similarity=0.536 Sum_probs=37.3
Q ss_pred ccccccCCCccccccccccc-cccccchhhhh------CCCCcccchHhHhhhe
Q 011117 68 RVHFCVRCDYPIAIYGRLNP-CEHVFCLDCAR------SDSMCYLCDERIQKIQ 114 (493)
Q Consensus 68 KvhFCdICdlPI~iygRmIP-CKHVFCydCA~------sDktCP~Cna~VqrIE 114 (493)
..+.|+||...+..++ +++ |.|+||..|+. ...+||.|+..+...+
T Consensus 12 ~~~~C~IC~~~~~~p~-~~~~CgH~fC~~Ci~~~~~~~~~~~CP~Cr~~~~~~~ 64 (92)
T 3ztg_A 12 DELLCLICKDIMTDAV-VIPCCGNSYCDECIRTALLESDEHTCPTCHQNDVSPD 64 (92)
T ss_dssp TTTEETTTTEECSSCE-ECTTTCCEECHHHHHHHHHHCTTCCCTTTCCSSCCTT
T ss_pred cCCCCCCCChhhcCce-ECCCCCCHHHHHHHHHHHHhcCCCcCcCCCCcCCCcc
Confidence 4689999999888876 557 99999999997 2368999999874433
No 35
>2ea5_A Cell growth regulator with ring finger domain protein 1; CGRRF1, ring domain, zinc-binding domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=98.14 E-value=4.9e-07 Score=69.87 Aligned_cols=54 Identities=24% Similarity=0.462 Sum_probs=43.8
Q ss_pred hcCcccccccCCCccccccccccccccc-cchhhhhCCCCcccchHhHhhheeeec
Q 011117 64 QLGERVHFCVRCDYPIAIYGRLNPCEHV-FCLDCARSDSMCYLCDERIQKIQTIKL 118 (493)
Q Consensus 64 qlgEKvhFCdICdlPI~iygRmIPCKHV-FCydCA~sDktCP~Cna~VqrIEri~p 118 (493)
...+....|.||-.-... ..++||.|+ ||.+|+....+||+|+..|..+-++..
T Consensus 10 ~~~~~~~~C~IC~~~~~~-~v~~pCgH~~~C~~C~~~~~~CP~CR~~i~~~~~i~~ 64 (68)
T 2ea5_A 10 PSEENSKDCVVCQNGTVN-WVLLPCRHTCLCDGCVKYFQQCPMCRQFVQESFALSG 64 (68)
T ss_dssp CSCCCSSCCSSSSSSCCC-CEETTTTBCCSCTTHHHHCSSCTTTCCCCCCEECCCS
T ss_pred ccCCCCCCCCCcCcCCCC-EEEECCCChhhhHHHHhcCCCCCCCCcchhceEEeec
Confidence 445567899999755443 568899999 999999988999999999988776653
No 36
>1t1h_A Gspef-atpub14, armadillo repeat containing protein; ubiquitin ligase, E3 ligase, U-BOX,; NMR {Arabidopsis thaliana} SCOP: g.44.1.2
Probab=98.14 E-value=4.8e-07 Score=68.95 Aligned_cols=43 Identities=7% Similarity=-0.028 Sum_probs=36.9
Q ss_pred ccccccCCCccccccccccccccccchhhhh----C-CCCcccchHhHh
Q 011117 68 RVHFCVRCDYPIAIYGRLNPCEHVFCLDCAR----S-DSMCYLCDERIQ 111 (493)
Q Consensus 68 KvhFCdICdlPI~iygRmIPCKHVFCydCA~----s-DktCP~Cna~Vq 111 (493)
..+.|+||...+..++. ++|+|+||..|+. . ..+||.|+..+.
T Consensus 7 ~~~~C~IC~~~~~~Pv~-~~CgH~fc~~Ci~~~~~~~~~~CP~C~~~~~ 54 (78)
T 1t1h_A 7 EYFRCPISLELMKDPVI-VSTGQTYERSSIQKWLDAGHKTCPKSQETLL 54 (78)
T ss_dssp SSSSCTTTSCCCSSEEE-ETTTEEEEHHHHHHHHTTTCCBCTTTCCBCS
T ss_pred ccCCCCCccccccCCEE-cCCCCeecHHHHHHHHHHCcCCCCCCcCCCC
Confidence 36899999999998876 4899999999997 2 578999998874
No 37
>4ayc_A E3 ubiquitin-protein ligase RNF8; DNA damage, K63 chains; HET: CPQ; 1.90A {Homo sapiens} PDB: 4epo_C
Probab=98.13 E-value=4.2e-07 Score=77.16 Aligned_cols=43 Identities=23% Similarity=0.507 Sum_probs=36.2
Q ss_pred cccccCCCccccccccccccccccchhhhh----CCCCcccchHhHhh
Q 011117 69 VHFCVRCDYPIAIYGRLNPCEHVFCLDCAR----SDSMCYLCDERIQK 112 (493)
Q Consensus 69 vhFCdICdlPI~iygRmIPCKHVFCydCA~----sDktCP~Cna~Vqr 112 (493)
.+.|+||...+...+ ++||+|+||.+|+. ...+||.|+..|..
T Consensus 53 ~~~C~iC~~~~~~~~-~~~CgH~fc~~Ci~~~~~~~~~CP~Cr~~~~~ 99 (138)
T 4ayc_A 53 ELQCIICSEYFIEAV-TLNCAHSFCSYCINEWMKRKIECPICRKDIKS 99 (138)
T ss_dssp HSBCTTTCSBCSSEE-EETTSCEEEHHHHHHHTTTCSBCTTTCCBCCC
T ss_pred cCCCcccCcccCCce-ECCCCCCccHHHHHHHHHcCCcCCCCCCcCCC
Confidence 568999998888765 67999999999998 45789999988743
No 38
>2ct2_A Tripartite motif protein 32; zinc-finger protein HT2A, TAT- interacting protein, ring domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=98.11 E-value=5.1e-07 Score=69.42 Aligned_cols=44 Identities=25% Similarity=0.530 Sum_probs=35.4
Q ss_pred ccccccCCCccccc---cccccccccccchhhhh----C---CCCcccchHhHh
Q 011117 68 RVHFCVRCDYPIAI---YGRLNPCEHVFCLDCAR----S---DSMCYLCDERIQ 111 (493)
Q Consensus 68 KvhFCdICdlPI~i---ygRmIPCKHVFCydCA~----s---DktCP~Cna~Vq 111 (493)
..+.|+||...+.. ..++++|.|+||.+|+. . ..+||.|+..+.
T Consensus 14 ~~~~C~IC~~~~~~~~~~~~~~~CgH~fC~~Ci~~~~~~~~~~~~CP~Cr~~~~ 67 (88)
T 2ct2_A 14 EVLECPICMESFTEEQLRPKLLHCGHTICRQCLEKLLASSINGVRCPFCSKITR 67 (88)
T ss_dssp SCCBCTTTCCBCCTTSSCEEECSSSCEEEHHHHHHHHHHCSSCBCCTTTCCCBC
T ss_pred CCCCCccCCccccccCCCeEECCCCChhhHHHHHHHHHcCCCCcCCCCCCCccc
Confidence 46889999988877 23466899999999998 2 368999998764
No 39
>2ysj_A Tripartite motif-containing protein 31; ring-type zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=98.10 E-value=1.3e-06 Score=64.33 Aligned_cols=39 Identities=28% Similarity=0.583 Sum_probs=32.3
Q ss_pred cccccccCCCccccccccccccccccchhhhh-------CCCCcccc
Q 011117 67 ERVHFCVRCDYPIAIYGRLNPCEHVFCLDCAR-------SDSMCYLC 106 (493)
Q Consensus 67 EKvhFCdICdlPI~iygRmIPCKHVFCydCA~-------sDktCP~C 106 (493)
+..+.|+||...+...+.+ +|+|+||..|+. ...+||.|
T Consensus 18 ~~~~~C~IC~~~~~~p~~~-~CgH~fC~~Ci~~~~~~~~~~~~CP~C 63 (63)
T 2ysj_A 18 QEEVICPICLDILQKPVTI-DCGHNFCLKCITQIGETSCGFFKCPLC 63 (63)
T ss_dssp CCCCBCTTTCSBCSSCEEC-TTSSEECHHHHHHHHHHCSSCCCCSCC
T ss_pred ccCCCCCcCCchhCCeEEe-CCCCcchHHHHHHHHHcCCCCCcCcCC
Confidence 3468999999988887765 999999999997 13579998
No 40
>1z6u_A NP95-like ring finger protein isoform B; structural genomics consortium, ligase, ubiquitin-protein ligase, cell cycle regulation, SGC; 2.10A {Homo sapiens}
Probab=98.08 E-value=8.4e-07 Score=77.40 Aligned_cols=44 Identities=23% Similarity=0.474 Sum_probs=37.3
Q ss_pred cccccCCCccccccccccccccccchhhhh-----CCCCcccchHhHhhh
Q 011117 69 VHFCVRCDYPIAIYGRLNPCEHVFCLDCAR-----SDSMCYLCDERIQKI 113 (493)
Q Consensus 69 vhFCdICdlPI~iygRmIPCKHVFCydCA~-----sDktCP~Cna~VqrI 113 (493)
.+.|+||...+...+. ++|.|+||..|+. ...+||.|+..+...
T Consensus 78 ~~~C~IC~~~~~~pv~-~~CgH~fC~~Ci~~~~~~~~~~CP~Cr~~~~~~ 126 (150)
T 1z6u_A 78 SFMCVCCQELVYQPVT-TECFHNVCKDCLQRSFKAQVFSCPACRHDLGQN 126 (150)
T ss_dssp HTBCTTTSSBCSSEEE-CTTSCEEEHHHHHHHHHTTCCBCTTTCCBCCTT
T ss_pred CCEeecCChhhcCCEE-cCCCCchhHHHHHHHHHhCCCcCCCCCccCCCC
Confidence 5899999998888776 6999999999998 235899999998654
No 41
>1jm7_B BARD1, BRCA1-associated ring domain protein 1; ring finger, zinc-binding protein, heterodimer, ubiquitin ligase, antitumor; NMR {Homo sapiens} SCOP: g.44.1.1
Probab=98.08 E-value=8.5e-07 Score=73.18 Aligned_cols=44 Identities=27% Similarity=0.612 Sum_probs=38.3
Q ss_pred ccccccCCCccccccccccccccccchhhhh--CCCCcccchHhHh
Q 011117 68 RVHFCVRCDYPIAIYGRLNPCEHVFCLDCAR--SDSMCYLCDERIQ 111 (493)
Q Consensus 68 KvhFCdICdlPI~iygRmIPCKHVFCydCA~--sDktCP~Cna~Vq 111 (493)
..+.|+||...+..++.+.+|.|+||..|+. ...+||.|+..+.
T Consensus 21 ~~~~C~IC~~~~~~pv~~~~CgH~fC~~Ci~~~~~~~CP~Cr~~~~ 66 (117)
T 1jm7_B 21 KLLRCSRCTNILREPVCLGGCEHIFCSNCVSDCIGTGCPVCYTPAW 66 (117)
T ss_dssp HTTSCSSSCSCCSSCBCCCSSSCCBCTTTGGGGTTTBCSSSCCBCS
T ss_pred hCCCCCCCChHhhCccEeCCCCCHHHHHHHHHHhcCCCcCCCCcCc
Confidence 3689999999999988777999999999998 3378999999873
No 42
>1iym_A EL5; ring-H2 finger, ubiquitin ligase, DNA binding protein; NMR {Oryza sativa} SCOP: g.44.1.1
Probab=98.06 E-value=1.1e-06 Score=62.86 Aligned_cols=43 Identities=30% Similarity=0.565 Sum_probs=34.3
Q ss_pred ccccccCCCccccc--cccccc-cccccchhhhh----CCCCcccchHhH
Q 011117 68 RVHFCVRCDYPIAI--YGRLNP-CEHVFCLDCAR----SDSMCYLCDERI 110 (493)
Q Consensus 68 KvhFCdICdlPI~i--ygRmIP-CKHVFCydCA~----sDktCP~Cna~V 110 (493)
....|.||...+.. ..+.++ |+|+||.+|+. ...+||+|+..|
T Consensus 4 ~~~~C~IC~~~~~~~~~~~~~~~C~H~f~~~Ci~~w~~~~~~CP~Cr~~~ 53 (55)
T 1iym_A 4 DGVECAVCLAELEDGEEARFLPRCGHGFHAECVDMWLGSHSTCPLCRLTV 53 (55)
T ss_dssp CSCCCTTTCCCCCTTSCCEECSSSCCEECTTHHHHTTTTCCSCSSSCCCS
T ss_pred CCCcCccCCccccCCCceEECCCCCCcccHHHHHHHHHcCCcCcCCCCEe
Confidence 45689999988766 234555 99999999998 457899999876
No 43
>2l0b_A E3 ubiquitin-protein ligase praja-1; zinc finger, NESG, structural genomics, PSI-2, protein struc initiative; NMR {Homo sapiens}
Probab=98.04 E-value=8.7e-07 Score=70.57 Aligned_cols=45 Identities=20% Similarity=0.425 Sum_probs=35.7
Q ss_pred cccccccCCCccccc--cccccccccccchhhhh----CCCCcccchHhHh
Q 011117 67 ERVHFCVRCDYPIAI--YGRLNPCEHVFCLDCAR----SDSMCYLCDERIQ 111 (493)
Q Consensus 67 EKvhFCdICdlPI~i--ygRmIPCKHVFCydCA~----sDktCP~Cna~Vq 111 (493)
+....|.||...+.. ..+.+||+|+||..|+. ...+||+|+..|.
T Consensus 38 ~~~~~C~IC~~~~~~~~~~~~l~C~H~Fh~~Ci~~wl~~~~~CP~Cr~~~~ 88 (91)
T 2l0b_A 38 GQEMCCPICCSEYVKGDVATELPCHHYFHKPCVSIWLQKSGTCPVCRCMFP 88 (91)
T ss_dssp SSCSEETTTTEECCTTCEEEEETTTEEEEHHHHHHHHTTTCBCTTTCCBSS
T ss_pred CCCCCCcccChhhcCCCcEEecCCCChHHHHHHHHHHHcCCcCcCcCccCC
Confidence 346789999866654 35567899999999998 4579999998763
No 44
>1jm7_A BRCA1, breast cancer type 1 susceptibility protein; ring finger, zinc-binding protein, heterodimer, ubiquitin ligase, antitumor; NMR {Homo sapiens} SCOP: g.44.1.1
Probab=98.03 E-value=1.3e-06 Score=70.17 Aligned_cols=43 Identities=33% Similarity=0.614 Sum_probs=35.8
Q ss_pred cccccCCCccccccccccccccccchhhhh----CC---CCcccchHhHhh
Q 011117 69 VHFCVRCDYPIAIYGRLNPCEHVFCLDCAR----SD---SMCYLCDERIQK 112 (493)
Q Consensus 69 vhFCdICdlPI~iygRmIPCKHVFCydCA~----sD---ktCP~Cna~Vqr 112 (493)
.+.|+||...+..... ++|.|+||..|+. .. .+||.|+..+..
T Consensus 21 ~~~C~IC~~~~~~p~~-~~CgH~fC~~Ci~~~~~~~~~~~~CP~Cr~~~~~ 70 (112)
T 1jm7_A 21 ILECPICLELIKEPVS-TKCDHIFCKFCMLKLLNQKKGPSQCPLCKNDITK 70 (112)
T ss_dssp HTSCSSSCCCCSSCCB-CTTSCCCCSHHHHHHHHSSSSSCCCTTTSCCCCT
T ss_pred CCCCcccChhhcCeEE-CCCCCHHHHHHHHHHHHhCCCCCCCcCCCCcCCH
Confidence 5789999998887765 6899999999997 22 489999998764
No 45
>1v87_A Deltex protein 2; ring-H2 domain, zinc-binding domain, notch signaling, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Mus musculus} SCOP: g.44.1.1
Probab=98.03 E-value=8.9e-07 Score=71.84 Aligned_cols=52 Identities=25% Similarity=0.441 Sum_probs=38.4
Q ss_pred cccccCCCcccccc-----------------ccccccccccchhhhh--C-------CCCcccchHhHhhheeeecCC
Q 011117 69 VHFCVRCDYPIAIY-----------------GRLNPCEHVFCLDCAR--S-------DSMCYLCDERIQKIQTIKLME 120 (493)
Q Consensus 69 vhFCdICdlPI~iy-----------------gRmIPCKHVFCydCA~--s-------DktCP~Cna~VqrIEri~p~e 120 (493)
...|.||-..|... +++.+|.|+||.+|+. . ..+||+|+..+....-..+.+
T Consensus 25 ~~~C~ICl~~~~~~~~~~~~~~~~~~~~~~~~~~~~C~H~Fh~~Ci~~wl~~~~~~~~~~CP~CR~~~~~~~g~qp~g 102 (114)
T 1v87_A 25 EEDCIICMEKLAVASGYSDMTDSKALGPMVVGRLTKCSHAFHLLCLLAMYCNGNKDGSLQCPSCKTIYGEKTGTQPWG 102 (114)
T ss_dssp SCEETTTTEETTSCCSTTTTCCCSSSCSSCCEEESSSCCEECHHHHHHHHHHTCCSSCCBCTTTCCBSSSCSSSCTTS
T ss_pred CCcCccCChhhcCcccccccccccccCcccceecCCCCCcccHHHHHHHHHcccCCCCCcCCCCCCccCCCCCCCCCC
Confidence 46899998887542 3478999999999997 1 358999999886544333333
No 46
>1g25_A CDK-activating kinase assembly factor MAT1; ring finger (C3HC4), metal binding protein; NMR {Homo sapiens} SCOP: g.44.1.1
Probab=98.00 E-value=1.2e-06 Score=64.99 Aligned_cols=44 Identities=25% Similarity=0.557 Sum_probs=35.4
Q ss_pred cccccCCCc-cccccc---cccccccccchhhhh-----CCCCcccchHhHhh
Q 011117 69 VHFCVRCDY-PIAIYG---RLNPCEHVFCLDCAR-----SDSMCYLCDERIQK 112 (493)
Q Consensus 69 vhFCdICdl-PI~iyg---RmIPCKHVFCydCA~-----sDktCP~Cna~Vqr 112 (493)
...|+||.. .+.... .+.+|+|+||..|+. ...+||.|+..+..
T Consensus 3 ~~~C~IC~~~~~~~~~~~~~~~~CgH~fC~~Ci~~~~~~~~~~CP~Cr~~~~~ 55 (65)
T 1g25_A 3 DQGCPRCKTTKYRNPSLKLMVNVCGHTLCESCVDLLFVRGAGNCPECGTPLRK 55 (65)
T ss_dssp TTCCSTTTTHHHHCSSCCEEECTTCCCEEHHHHHHHHHTTSSSCTTTCCCCSS
T ss_pred CCcCCcCCCCccCCCccCeecCCCCCHhHHHHHHHHHHcCCCcCCCCCCcccc
Confidence 357999988 666665 367999999999997 23679999999864
No 47
>4ic3_A E3 ubiquitin-protein ligase XIAP; ring domain, zinc-finger, E3 ligase; 1.78A {Homo sapiens} PDB: 4ic2_A
Probab=97.99 E-value=1.2e-06 Score=67.79 Aligned_cols=47 Identities=28% Similarity=0.520 Sum_probs=39.7
Q ss_pred cccccCCCccccccccccccccc-cchhhhhCCCCcccchHhHhhheee
Q 011117 69 VHFCVRCDYPIAIYGRLNPCEHV-FCLDCARSDSMCYLCDERIQKIQTI 116 (493)
Q Consensus 69 vhFCdICdlPI~iygRmIPCKHV-FCydCA~sDktCP~Cna~VqrIEri 116 (493)
...|.||...+...+ ++||.|. ||..|+..-.+||.|+..|..+-++
T Consensus 24 ~~~C~iC~~~~~~~~-~~pCgH~~~C~~C~~~~~~CP~Cr~~i~~~~~i 71 (74)
T 4ic3_A 24 EKLCKICMDRNIAIV-FVPCGHLVTCKQCAEAVDKCPMCYTVITFKQKI 71 (74)
T ss_dssp HTBCTTTSSSBCCEE-EETTCCBCCCHHHHTTCSBCTTTCCBCSEEEEC
T ss_pred CCCCCCCCCCCCCEE-EcCCCChhHHHHhhhcCccCCCcCcCccCcEEE
Confidence 578999998777655 5699999 9999999779999999999776544
No 48
>2ecj_A Tripartite motif-containing protein 39; TRIM39, ring domain, zinc-binding domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=97.96 E-value=4.1e-06 Score=60.02 Aligned_cols=38 Identities=26% Similarity=0.506 Sum_probs=31.5
Q ss_pred ccccccCCCccccccccccccccccchhhhh-------CCCCcccc
Q 011117 68 RVHFCVRCDYPIAIYGRLNPCEHVFCLDCAR-------SDSMCYLC 106 (493)
Q Consensus 68 KvhFCdICdlPI~iygRmIPCKHVFCydCA~-------sDktCP~C 106 (493)
....|.||...+.... +++|.|+||.+|+. ...+||.|
T Consensus 14 ~~~~C~IC~~~~~~p~-~~~CgH~fC~~Ci~~~~~~~~~~~~CP~C 58 (58)
T 2ecj_A 14 VEASCSVCLEYLKEPV-IIECGHNFCKACITRWWEDLERDFPCPVC 58 (58)
T ss_dssp CCCBCSSSCCBCSSCC-CCSSCCCCCHHHHHHHTTSSCCSCCCSCC
T ss_pred cCCCCccCCcccCccE-eCCCCCccCHHHHHHHHHhcCCCCCCCCC
Confidence 3678999999888875 46899999999997 22679988
No 49
>2vje_B MDM4 protein; proto-oncogene, phosphorylation, alternative splicing, HOST-virus interaction, UBL conjugation pathway, zinc-finger, polymorphism; HET: FLC; 2.20A {Homo sapiens} PDB: 2vjf_B*
Probab=97.86 E-value=3.3e-06 Score=63.90 Aligned_cols=48 Identities=23% Similarity=0.528 Sum_probs=36.8
Q ss_pred ccccccCCCcccccccccc--ccccc-cchhhhh----CCCCcccchHhHhhheee
Q 011117 68 RVHFCVRCDYPIAIYGRLN--PCEHV-FCLDCAR----SDSMCYLCDERIQKIQTI 116 (493)
Q Consensus 68 KvhFCdICdlPI~iygRmI--PCKHV-FCydCA~----sDktCP~Cna~VqrIEri 116 (493)
....|.||-.-..... ++ ||+|+ ||++|+. ...+||+|+..|.++-++
T Consensus 6 ~~~~C~IC~~~~~~~~-~~~~pCgH~~~C~~C~~~~~~~~~~CPiCR~~i~~~i~i 60 (63)
T 2vje_B 6 LLKPCSLCEKRPRDGN-IIHGRTGHLVTCFHCARRLKKAGASCPICKKEIQLVIKV 60 (63)
T ss_dssp GGSBCTTTSSSBSCEE-EEETTEEEEEECHHHHHHHHHTTCBCTTTCCBCCEEEEE
T ss_pred cCCCCcccCCcCCCeE-EEecCCCCHhHHHHHHHHHHHhCCcCCCcCchhhceEEE
Confidence 3568999986554432 44 99998 9999998 346999999999776554
No 50
>2vje_A E3 ubiquitin-protein ligase MDM2; proto-oncogene, phosphorylation, alternative splicing, HOST-virus interaction, UBL conjugation pathway, zinc-finger, polymorphism; HET: FLC; 2.20A {Homo sapiens} PDB: 2vjf_A* 2hdp_A
Probab=97.85 E-value=3.4e-06 Score=64.02 Aligned_cols=48 Identities=25% Similarity=0.483 Sum_probs=37.5
Q ss_pred ccccccCCCcccccccccc--ccccc-cchhhhh----CCCCcccchHhHhhheee
Q 011117 68 RVHFCVRCDYPIAIYGRLN--PCEHV-FCLDCAR----SDSMCYLCDERIQKIQTI 116 (493)
Q Consensus 68 KvhFCdICdlPI~iygRmI--PCKHV-FCydCA~----sDktCP~Cna~VqrIEri 116 (493)
....|.||-....... ++ ||+|+ ||++|+. ...+||+|+..|..+-++
T Consensus 7 ~~~~C~IC~~~~~~~~-~~~~pCgH~~~C~~C~~~~~~~~~~CPiCR~~i~~~i~i 61 (64)
T 2vje_A 7 AIEPCVICQGRPKNGC-IVHGKTGHLMACFTCAKKLKKRNKPCPVCRQPIQMIVLT 61 (64)
T ss_dssp GGSCCTTTSSSCSCEE-EEETTEEEEEECHHHHHHHHHTTCCCTTTCCCCCEEEEE
T ss_pred CcCCCCcCCCCCCCEE-EECCCCCChhhHHHHHHHHHHcCCcCCCcCcchhceEee
Confidence 4568999986666544 44 99999 8999998 446899999999766544
No 51
>1e4u_A Transcriptional repressor NOT4; gene regulation, transcriptional control; NMR {Homo sapiens} SCOP: g.44.1.1 PDB: 1ur6_B
Probab=97.81 E-value=6.3e-06 Score=65.55 Aligned_cols=46 Identities=24% Similarity=0.499 Sum_probs=36.5
Q ss_pred cccccccCCCccccc-cccccc--cccccchhhhh-----CCCCcccchHhHhh
Q 011117 67 ERVHFCVRCDYPIAI-YGRLNP--CEHVFCLDCAR-----SDSMCYLCDERIQK 112 (493)
Q Consensus 67 EKvhFCdICdlPI~i-ygRmIP--CKHVFCydCA~-----sDktCP~Cna~Vqr 112 (493)
+....|+||-.++.+ ..+..| |.|.||..|+. ....||.|+..+..
T Consensus 9 ~~~~~CpICle~~~~~d~~~~p~~CGH~fC~~Cl~~~~~~~~~~CP~CR~~~~~ 62 (78)
T 1e4u_A 9 EDPVECPLCMEPLEIDDINFFPCTCGYQICRFCWHRIRTDENGLCPACRKPYPE 62 (78)
T ss_dssp CCCCBCTTTCCBCCTTTTTCCSSTTSCCCCHHHHHHHTTSSCSBCTTTCCBCSS
T ss_pred ccCCcCCccCccCccccccccccCCCCCcCHHHHHHHHhcCCCCCCCCCCccCC
Confidence 446889999998864 345555 99999999997 24689999998864
No 52
>2yho_A E3 ubiquitin-protein ligase mylip; ligase, E2 ligase-E3 ligase complex, ring zinc-finger, UBL conjugation pathway; 2.10A {Homo sapiens} PDB: 2yhn_A
Probab=97.80 E-value=4.2e-06 Score=66.12 Aligned_cols=48 Identities=25% Similarity=0.627 Sum_probs=39.5
Q ss_pred cccccCCCccccccccccccccc-cchhhhhCCCCcccchHhHhhheeee
Q 011117 69 VHFCVRCDYPIAIYGRLNPCEHV-FCLDCARSDSMCYLCDERIQKIQTIK 117 (493)
Q Consensus 69 vhFCdICdlPI~iygRmIPCKHV-FCydCA~sDktCP~Cna~VqrIEri~ 117 (493)
...|.||...... ..++||+|+ ||.+|+..-..||+|+..|..+-++.
T Consensus 18 ~~~C~IC~~~~~~-~v~~pCgH~~~C~~C~~~~~~CP~Cr~~i~~~~~i~ 66 (79)
T 2yho_A 18 AMLCMVCCEEEIN-STFCPCGHTVCCESCAAQLQSCPVCRSRVEHVQHVY 66 (79)
T ss_dssp HTBCTTTSSSBCC-EEEETTCBCCBCHHHHTTCSBCTTTCCBCCEEEECB
T ss_pred CCEeEEeCcccCc-EEEECCCCHHHHHHHHHhcCcCCCCCchhhCeEEEE
Confidence 5689999766655 457799999 99999998789999999998765543
No 53
>4ap4_A E3 ubiquitin ligase RNF4; ligase-signalling protein complex, chimera; 2.21A {Rattus norvegicus}
Probab=97.71 E-value=6.3e-06 Score=66.72 Aligned_cols=50 Identities=26% Similarity=0.538 Sum_probs=40.8
Q ss_pred hcCcccccccCCCcccccc------ccccccccccchhhhh----CCCCcccchHhHhhh
Q 011117 64 QLGERVHFCVRCDYPIAIY------GRLNPCEHVFCLDCAR----SDSMCYLCDERIQKI 113 (493)
Q Consensus 64 qlgEKvhFCdICdlPI~iy------gRmIPCKHVFCydCA~----sDktCP~Cna~VqrI 113 (493)
.+.+....|.||...+... .+..+|+|+||..|+. ..++||.|+..|..-
T Consensus 67 ~i~~~~~~C~iC~~~~~~~~~~~~~~~~~~CgH~fc~~Ci~~~~~~~~~CP~Cr~~~~~~ 126 (133)
T 4ap4_A 67 YIGSGTVSCPICMDGYSEIVQNGRLIVSTECGHVFCSQCLRDSLKNANTCPTCRKKINHK 126 (133)
T ss_dssp BCSSSSCBCTTTCCBHHHHHHTTCCEEEETTSBEEEHHHHHHHHHHCSBCTTTCCBCCGG
T ss_pred ccCCCCCCCCCCCCccccccccCcceEeCCCCChhhHHHHHHHHHcCCCCCCCCCcCChh
Confidence 3556688999999888764 2677999999999998 568999999988643
No 54
>2ecl_A Ring-box protein 2; RNF7, ring domian, zinc-binding domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=97.65 E-value=1e-05 Score=63.47 Aligned_cols=44 Identities=20% Similarity=0.428 Sum_probs=33.6
Q ss_pred cccccCCCcccccc-------------cccc-ccccccchhhhh----CCCCcccchHhHhh
Q 011117 69 VHFCVRCDYPIAIY-------------GRLN-PCEHVFCLDCAR----SDSMCYLCDERIQK 112 (493)
Q Consensus 69 vhFCdICdlPI~iy-------------gRmI-PCKHVFCydCA~----sDktCP~Cna~Vqr 112 (493)
...|.||-..|... .+.+ +|+|+||.+|+. ...+||+|+..+..
T Consensus 15 ~~~C~IC~~~~~~~C~iC~~~~~~~~~~~~~~~C~H~FH~~Ci~~Wl~~~~~CP~CR~~~~~ 76 (81)
T 2ecl_A 15 CDTCAICRVQVMDACLRCQAENKQEDCVVVWGECNHSFHNCCMSLWVKQNNRCPLCQQDWVV 76 (81)
T ss_dssp CSCBTTTTBCTTSCCTTHHHHTCTTTCCEEEETTSCEEEHHHHHHHTTTCCBCTTTCCBCCE
T ss_pred CCCCcccChhhhccCcccccccCCCceEEEeCCCCCccChHHHHHHHHhCCCCCCcCCCcch
Confidence 45688888877552 3344 599999999998 45799999988743
No 55
>2c2l_A CHIP, carboxy terminus of HSP70-interacting protein; chaperone, E3 ligase, ubiquitinylation, TPR, heat-shock protein complex; 3.3A {Mus musculus} SCOP: a.118.8.1 g.44.1.2
Probab=97.61 E-value=1.9e-05 Score=71.03 Aligned_cols=42 Identities=2% Similarity=-0.212 Sum_probs=36.3
Q ss_pred cccccCCCccccccccccccccccchhhhh-----CCCCcccchHhHh
Q 011117 69 VHFCVRCDYPIAIYGRLNPCEHVFCLDCAR-----SDSMCYLCDERIQ 111 (493)
Q Consensus 69 vhFCdICdlPI~iygRmIPCKHVFCydCA~-----sDktCP~Cna~Vq 111 (493)
.+.|+||...+..++. +||.|+||..|+. ...+||.|+..++
T Consensus 208 ~~~c~i~~~~~~dPv~-~~~gh~f~~~~i~~~~~~~~~~cP~~~~~~~ 254 (281)
T 2c2l_A 208 YLCGKISFELMREPCI-TPSGITYDRKDIEEHLQRVGHFNPVTRSPLT 254 (281)
T ss_dssp TTBCTTTCSBCSSEEE-CSSCCEEETTHHHHHHHHTCSSCTTTCCCCC
T ss_pred ccCCcCcCCHhcCCeE-CCCCCEECHHHHHHHHHHCCCCCcCCCCCCc
Confidence 6889999999999985 5699999999998 3456999998875
No 56
>2y1n_A E3 ubiquitin-protein ligase; ligase-transferase complex, ubiquitin ring E3 ligase; HET: PTR; 2.00A {Homo sapiens} PDB: 2y1m_A* 4a4c_A* 4a4b_A* 1fbv_A* 3vgo_A 4a49_A* 2k4d_A 2ldr_A*
Probab=97.59 E-value=1.6e-05 Score=80.36 Aligned_cols=48 Identities=23% Similarity=0.611 Sum_probs=39.7
Q ss_pred cccccCCCccccccccccccccccchhhhh-----CCCCcccchHhHhhheeee
Q 011117 69 VHFCVRCDYPIAIYGRLNPCEHVFCLDCAR-----SDSMCYLCDERIQKIQTIK 117 (493)
Q Consensus 69 vhFCdICdlPI~iygRmIPCKHVFCydCA~-----sDktCP~Cna~VqrIEri~ 117 (493)
...|.||-..+... .++||+|+||..|+. ...+||.|+..|...+.+.
T Consensus 332 ~~~C~ICle~~~~p-v~lpCGH~FC~~Ci~~wl~~~~~~CP~CR~~i~~~~~i~ 384 (389)
T 2y1n_A 332 FQLCKICAENDKDV-KIEPCGHLMCTSCLTSWQESEGQGCPFCRCEIKGTEPIV 384 (389)
T ss_dssp SSBCTTTSSSBCCE-EEETTCCEECHHHHHHHHHHTCSBCTTTCCBCCEEEECS
T ss_pred CCCCCccCcCCCCe-EEeCCCChhhHHHHHHHHhcCCCCCCCCCCccCCceeEe
Confidence 47999998777664 568999999999998 3578999999998776554
No 57
>3t6p_A Baculoviral IAP repeat-containing protein 2; ring, BIR, CARD, UBA, apoptosis, ubiquitin ligase, SMAC/ ubiquitin, caspase, IAP family, SMAC mimetic; 1.90A {Homo sapiens} PDB: 1qbh_A 2l9m_A 3eb5_A 3eb6_A 4auq_B
Probab=97.52 E-value=1.8e-05 Score=78.09 Aligned_cols=47 Identities=26% Similarity=0.489 Sum_probs=39.8
Q ss_pred cccccCCCccccccccccccccc-cchhhhhCCCCcccchHhHhhheee
Q 011117 69 VHFCVRCDYPIAIYGRLNPCEHV-FCLDCARSDSMCYLCDERIQKIQTI 116 (493)
Q Consensus 69 vhFCdICdlPI~iygRmIPCKHV-FCydCA~sDktCP~Cna~VqrIEri 116 (493)
...|.||-..+.... ++||.|. ||..|+..-..||.|+..|..+-++
T Consensus 295 ~~~C~IC~~~~~~~v-~lpCgH~~fC~~C~~~~~~CP~CR~~i~~~~~i 342 (345)
T 3t6p_A 295 ERTCKVCMDKEVSVV-FIPCGHLVVCQECAPSLRKCPICRGIIKGTVRT 342 (345)
T ss_dssp TCBCTTTSSSBCCEE-EETTCCEEECTTTGGGCSBCTTTCCBCCEEEEC
T ss_pred CCCCCccCCcCCceE-EcCCCChhHhHHHHhcCCcCCCCCCCccCeEEe
Confidence 578999988777655 4599999 9999999779999999999776544
No 58
>1wgm_A Ubiquitin conjugation factor E4A; ubiquitinating enzyme, KIAA0126, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Homo sapiens} SCOP: g.44.1.2
Probab=97.47 E-value=2e-05 Score=64.73 Aligned_cols=43 Identities=7% Similarity=-0.176 Sum_probs=36.9
Q ss_pred ccccccCCCccccccccccccc-cccchhhhh----CCCCcccchHhHh
Q 011117 68 RVHFCVRCDYPIAIYGRLNPCE-HVFCLDCAR----SDSMCYLCDERIQ 111 (493)
Q Consensus 68 KvhFCdICdlPI~iygRmIPCK-HVFCydCA~----sDktCP~Cna~Vq 111 (493)
..+.|+||...+..++. ++|. |+||..||. ...+||.|+..+.
T Consensus 21 ~~~~CpI~~~~m~dPV~-~~cG~htf~r~cI~~~l~~~~~cP~~~~~l~ 68 (98)
T 1wgm_A 21 DEFLDPIMSTLMCDPVV-LPSSRVTVDRSTIARHLLSDQTDPFNRSPLT 68 (98)
T ss_dssp TTTBCTTTCSBCSSEEE-CTTTCCEEEHHHHHHHTTTSCBCTTTCSBCC
T ss_pred HhcCCcCccccccCCeE-CCCCCeEECHHHHHHHHHhCCCCCCCCCCCC
Confidence 36899999999999996 5688 999999998 4578999998764
No 59
>3dpl_R Ring-box protein 1; ubiquitin, NEDD8, cullin, HOST-virus interaction, receptor, UBL conjugation, UBL conjugation pathway, acetylation, cytoplasm; 2.60A {Homo sapiens} SCOP: g.44.1.1 PDB: 3dqv_R 3rtr_B 4f52_B 1u6g_B 2hye_D* 4a0c_D 4a0l_F* 1ldj_B 1ldk_C 2lgv_A
Probab=97.43 E-value=3.5e-05 Score=64.60 Aligned_cols=42 Identities=24% Similarity=0.498 Sum_probs=35.0
Q ss_pred cccccCCCcccccc-----------------ccccccccccchhhhh----CCCCcccchHhH
Q 011117 69 VHFCVRCDYPIAIY-----------------GRLNPCEHVFCLDCAR----SDSMCYLCDERI 110 (493)
Q Consensus 69 vhFCdICdlPI~iy-----------------gRmIPCKHVFCydCA~----sDktCP~Cna~V 110 (493)
...|.||-..|... .++.+|+|+|+..|+. ...+||+|+...
T Consensus 37 ~d~CaIC~~~~~~~c~~C~~~~~~~~~~~~~~~~~~C~H~FH~~Ci~~Wl~~~~~CP~Cr~~~ 99 (106)
T 3dpl_R 37 VDNCAICRNHIMDLCIECQANQASATSEECTVAWGVCNHAFHFHCISRWLKTRQVCPLDNREW 99 (106)
T ss_dssp SCCCSSSCSCTTSCCTTHHHHTTCC---CCCEEEETTSCEEEHHHHHHHHTTCSBCSSSCSBC
T ss_pred CCCCccCChhHhCcCchhhccccccCCccceEeecccCcEECHHHHHHHHHcCCcCcCCCCcc
Confidence 46799998887754 4668999999999998 468899999975
No 60
>2kr4_A Ubiquitin conjugation factor E4 B; U-BOX, UFD2, ring, E3 ligase, UBL conjugation pathway; NMR {Mus musculus}
Probab=97.43 E-value=2.9e-05 Score=61.84 Aligned_cols=43 Identities=12% Similarity=-0.085 Sum_probs=37.3
Q ss_pred ccccccCCCccccccccccccccccchhhhh----CCCCcccchHhHh
Q 011117 68 RVHFCVRCDYPIAIYGRLNPCEHVFCLDCAR----SDSMCYLCDERIQ 111 (493)
Q Consensus 68 KvhFCdICdlPI~iygRmIPCKHVFCydCA~----sDktCP~Cna~Vq 111 (493)
..+.|+||...+..++.+ +|+|+||..|+. ...+||.|+..+.
T Consensus 13 ~~~~CpI~~~~m~dPV~~-~cGhtf~r~~I~~~l~~~~~cP~~~~~l~ 59 (85)
T 2kr4_A 13 DEFRDPLMDTLMTDPVRL-PSGTVMDRSIILRHLLNSPTDPFNRQMLT 59 (85)
T ss_dssp TTTBCTTTCSBCSSEEEC-TTSCEEEHHHHHHHHHHCSBCTTTCCBCC
T ss_pred hheECcccCchhcCCeEC-CCCCEECHHHHHHHHhcCCCCCCCcCCCC
Confidence 368899999999999865 599999999998 5689999998764
No 61
>2yu4_A E3 SUMO-protein ligase NSE2; SP-ring domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=97.40 E-value=2.2e-05 Score=63.23 Aligned_cols=31 Identities=13% Similarity=0.099 Sum_probs=27.9
Q ss_pred ccccccCCCccccccccccccccccchhhhh
Q 011117 68 RVHFCVRCDYPIAIYGRLNPCEHVFCLDCAR 98 (493)
Q Consensus 68 KvhFCdICdlPI~iygRmIPCKHVFCydCA~ 98 (493)
..+.|+||...+..++.+..|+|+||..||.
T Consensus 6 ~~~~CPI~~~~~~dPV~~~~cGh~f~r~cI~ 36 (94)
T 2yu4_A 6 SGFTCPITKEEMKKPVKNKVCGHTYEEDAIV 36 (94)
T ss_dssp SCCBCTTTCSBCSSEEEESSSCCEEEHHHHH
T ss_pred cEeECcCcCchhcCCEEcCCCCCeecHHHHH
Confidence 4688999999999999775699999999997
No 62
>2kre_A Ubiquitin conjugation factor E4 B; U-box domain, E3 ubiquitin ligase, E4 polyubiquitin chain EL factor, phosphoprotein, UBL conjugation pathway; NMR {Homo sapiens} PDB: 3l1x_A 3l1z_B
Probab=97.38 E-value=3.7e-05 Score=63.38 Aligned_cols=42 Identities=10% Similarity=-0.075 Sum_probs=37.0
Q ss_pred cccccCCCccccccccccccccccchhhhh----CCCCcccchHhHh
Q 011117 69 VHFCVRCDYPIAIYGRLNPCEHVFCLDCAR----SDSMCYLCDERIQ 111 (493)
Q Consensus 69 vhFCdICdlPI~iygRmIPCKHVFCydCA~----sDktCP~Cna~Vq 111 (493)
.+.|+||...+..++.+ +|+|+||..|+. ...+||.|+..+.
T Consensus 29 ~~~CpI~~~~m~dPV~~-~cGhtf~r~~I~~~l~~~~~cP~~~~~l~ 74 (100)
T 2kre_A 29 EFRDPLMDTLMTDPVRL-PSGTIMDRSIILRHLLNSPTDPFNRQTLT 74 (100)
T ss_dssp TTBCTTTCSBCSSEEEE-TTTEEEEHHHHHHHTTSCSBCSSSCCBCC
T ss_pred hhCCcCccCcccCCeEC-CCCCEEchHHHHHHHHcCCCCCCCCCCCC
Confidence 68999999999999865 599999999998 4689999998764
No 63
>2f42_A STIP1 homology and U-box containing protein 1; chaperone; 2.50A {Danio rerio} PDB: 2c2v_S 2oxq_C
Probab=97.21 E-value=0.00012 Score=66.95 Aligned_cols=43 Identities=2% Similarity=-0.234 Sum_probs=36.9
Q ss_pred ccccccCCCccccccccccccccccchhhhh-----CCCCcccchHhHh
Q 011117 68 RVHFCVRCDYPIAIYGRLNPCEHVFCLDCAR-----SDSMCYLCDERIQ 111 (493)
Q Consensus 68 KvhFCdICdlPI~iygRmIPCKHVFCydCA~-----sDktCP~Cna~Vq 111 (493)
..+.|+||...+..++.+ ||+|+||..|+. ...+||.|+..+.
T Consensus 105 ~~f~CPI~~elm~DPV~~-~~Ghtfer~~I~~~l~~~~~tcP~t~~~l~ 152 (179)
T 2f42_A 105 DYLCGKISFELMREPCIT-PSGITYDRKDIEEHLQRVGHFDPVTRSPLT 152 (179)
T ss_dssp GGGBCTTTCSBCSSEEEC-TTSCEEEHHHHHHHHHHTCSBCTTTCCBCC
T ss_pred HhhcccCccccCCCCeEC-CCCCEECHHHHHHHHHhCCCCCCCCcCCCC
Confidence 368999999999999976 899999999998 2357999998764
No 64
>3htk_C E3 SUMO-protein ligase MMS21; SUMO E3 ligase, SPL-ring, ring, ATP-binding, chromosomal protein, coiled coil, DNA damage; 2.31A {Saccharomyces cerevisiae}
Probab=97.15 E-value=9.3e-05 Score=72.13 Aligned_cols=42 Identities=21% Similarity=0.278 Sum_probs=35.9
Q ss_pred cccccCCCccccccccccccccccchhhhh---CC---CCccc--chHhH
Q 011117 69 VHFCVRCDYPIAIYGRLNPCEHVFCLDCAR---SD---SMCYL--CDERI 110 (493)
Q Consensus 69 vhFCdICdlPI~iygRmIPCKHVFCydCA~---sD---ktCP~--Cna~V 110 (493)
.+.|+||...|..+++.+.|+|+||-.|+. .. .+||. |+..+
T Consensus 181 el~CPIcl~~f~DPVts~~CGHsFcR~cI~~~~~~~~~~~CPvtGCr~~l 230 (267)
T 3htk_C 181 ELTCPITCKPYEAPLISRKCNHVFDRDGIQNYLQGYTTRDCPQAACSQVV 230 (267)
T ss_dssp CSBCTTTSSBCSSEEEESSSCCEEEHHHHHHHSTTCSCEECSGGGCSCEE
T ss_pred eeECcCccCcccCCeeeCCCCCcccHHHHHHHHHhCCCCCCCcccccCcC
Confidence 689999999999999988999999999998 22 36777 77755
No 65
>4a0k_B E3 ubiquitin-protein ligase RBX1; ligase-DNA-binding protein-DNA complex, DNA-binding protein- complex; HET: DNA 3DR; 5.93A {Mus musculus}
Probab=97.09 E-value=7.7e-05 Score=64.13 Aligned_cols=43 Identities=23% Similarity=0.485 Sum_probs=0.4
Q ss_pred cccccCCCccccc-----------------cccccccccccchhhhh----CCCCcccchHhHh
Q 011117 69 VHFCVRCDYPIAI-----------------YGRLNPCEHVFCLDCAR----SDSMCYLCDERIQ 111 (493)
Q Consensus 69 vhFCdICdlPI~i-----------------ygRmIPCKHVFCydCA~----sDktCP~Cna~Vq 111 (493)
+-.|.||-..|.. .+...+|.|+||..|+. ...+||+|+....
T Consensus 48 ~d~CaICl~~~~~~c~~C~~~~~~~~~~~~~v~~~~C~H~FH~~CI~~Wl~~~~~CP~Cr~~~~ 111 (117)
T 4a0k_B 48 VDNCAICRNHIMDLCIECQANQASATSEECTVAWGVCNHAFHFHCISRWLKTRQVCPLDNREWE 111 (117)
T ss_dssp C---------------------------------------------------------------
T ss_pred CCcCeECChhhcCcChhhhcccccccccccccccCCcCceEcHHHHHHHHHcCCcCCCCCCeee
Confidence 3679999888764 23345899999999998 3578999999853
No 66
>1wim_A KIAA0161 protein; ring finger domain, UBCM4-interacting protein 4, UIP4, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Homo sapiens} SCOP: g.44.1.1
Probab=96.78 E-value=0.00031 Score=55.81 Aligned_cols=31 Identities=19% Similarity=0.489 Sum_probs=24.3
Q ss_pred ccccccCCCcccccc--ccccccccccchhhhh
Q 011117 68 RVHFCVRCDYPIAIY--GRLNPCEHVFCLDCAR 98 (493)
Q Consensus 68 KvhFCdICdlPI~iy--gRmIPCKHVFCydCA~ 98 (493)
+.+.|+||-..+... .++.+|.|.||.+|++
T Consensus 4 ~~~~C~IC~~~~~~~~~~~l~~CgH~FC~~Cl~ 36 (94)
T 1wim_A 4 GSSGCKLCLGEYPVEQMTTIAQCQCIFCTLCLK 36 (94)
T ss_dssp SBCCCSSSCCCCBGGGEEEETTTTEEEEHHHHH
T ss_pred CCcCCcccCcccccccceEcCCCCCcccHHHHH
Confidence 467899998666554 3445899999999987
No 67
>2csh_A Zinc finger protein 297B; ZF-C2H2 domain, zinc finger and BTB domain containing protein 22B, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1
Probab=96.65 E-value=0.00036 Score=54.16 Aligned_cols=81 Identities=16% Similarity=0.354 Sum_probs=55.0
Q ss_pred cCcccccccCCCccccccccccccccccchhhhhCCCCcccchHh------HhhheeeecCCcEEEecCCchhhhhcChh
Q 011117 65 LGERVHFCVRCDYPIAIYGRLNPCEHVFCLDCARSDSMCYLCDER------IQKIQTIKLMEGIFICAAPHCLKSFLKKT 138 (493)
Q Consensus 65 lgEKvhFCdICdlPI~iygRmIPCKHVFCydCA~sDktCP~Cna~------VqrIEri~p~esIFIC~~~gCkRtYLSqR 138 (493)
.+++.+.| +|++-|.....+. .|.--. -......|..|... +..-.+++..+..|.|.. |.+.|.+..
T Consensus 6 ~~~k~~~C-~C~~~f~~~~~l~--~H~~~h-~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~--C~~~f~~~~ 79 (110)
T 2csh_A 6 SGDKLYPC-QCGKSFTHKSQRD--RHMSMH-LGLRPYGCGVCGKKFKMKHHLVGHMKIHTGIKPYECNI--CAKRFMWRD 79 (110)
T ss_dssp CCCCCEEC-TTSCEESSHHHHH--HHHHHH-SCCCSEECTTTSCEESSSHHHHHHHTTTCCCCCEECSS--SCCEESCHH
T ss_pred CCCCCEec-cCCCccCCHHHHH--HHHHHc-CCCcCccCCCCCcccCCHHHHHHHHHHcCCCCCeeCCC--CcchhcCHH
Confidence 45678899 8998887765554 443200 00123567777643 333334565677899976 999999999
Q ss_pred HHHHhhhhhhccc
Q 011117 139 EFEAHIHVSHADL 151 (493)
Q Consensus 139 DLQAHInhrH~~l 151 (493)
+|..|++..|...
T Consensus 80 ~l~~H~~~~~~~~ 92 (110)
T 2csh_A 80 SFHRHVTSCTKSY 92 (110)
T ss_dssp HHHHHHHHHHHHH
T ss_pred HHHHHHHHccccc
Confidence 9999999888765
No 68
>2yt9_A Zinc finger-containing protein 1; C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1
Probab=96.33 E-value=0.00041 Score=52.15 Aligned_cols=80 Identities=21% Similarity=0.344 Sum_probs=52.1
Q ss_pred CcccccccCCCccccccccccccccccchhhhhCCCCcccchHhH------hhheeeecCC--cEEEecCCchhhhhcCh
Q 011117 66 GERVHFCVRCDYPIAIYGRLNPCEHVFCLDCARSDSMCYLCDERI------QKIQTIKLME--GIFICAAPHCLKSFLKK 137 (493)
Q Consensus 66 gEKvhFCdICdlPI~iygRmIPCKHVFCydCA~sDktCP~Cna~V------qrIEri~p~e--sIFIC~~~gCkRtYLSq 137 (493)
+++.+.|.+|++-|.....+. .|.-- .-......|..|.... ..-.+++..+ ..|.|.. |.+.|.+.
T Consensus 4 ~~~~~~C~~C~~~f~~~~~l~--~H~~~-h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~~~C~~--C~~~f~~~ 78 (95)
T 2yt9_A 4 GSSGVACEICGKIFRDVYHLN--RHKLS-HSGEKPYSCPVCGLRFKRKDRMSYHVRSHDGSVGKPYICQS--CGKGFSRP 78 (95)
T ss_dssp CCSCEECSSSCCEESSSHHHH--HHHHH-SCSSCSEECSSSCCEESCHHHHHHHHHHHCCCCCSSBCCSS--SCCCBSSH
T ss_pred CCCCeECCCCCCccCChHHHH--HHHHh-cCCCCCCcCCCCCCccCCHHHHHHHHHHhcCCCCCceECCC--ccchhCCH
Confidence 567889999998887766554 44310 0000225677776432 2222334333 6799865 99999999
Q ss_pred hHHHHhhhhhhcc
Q 011117 138 TEFEAHIHVSHAD 150 (493)
Q Consensus 138 RDLQAHInhrH~~ 150 (493)
..|+.|++..|..
T Consensus 79 ~~L~~H~~~~H~~ 91 (95)
T 2yt9_A 79 DHLNGHIKQVHSG 91 (95)
T ss_dssp HHHHHHHHHTSCC
T ss_pred HHHHHHHHHhcCC
Confidence 9999999888864
No 69
>2bay_A PRE-mRNA splicing factor PRP19; U-BOX, ubiquitin ligase, E3 ligase; 1.50A {Saccharomyces cerevisiae} SCOP: g.44.1.2 PDB: 1n87_A
Probab=96.24 E-value=0.0008 Score=51.29 Aligned_cols=46 Identities=7% Similarity=-0.075 Sum_probs=38.7
Q ss_pred cccccCCCccccccccccccccccchhhhh----CCCCcccchHhHhhhe
Q 011117 69 VHFCVRCDYPIAIYGRLNPCEHVFCLDCAR----SDSMCYLCDERIQKIQ 114 (493)
Q Consensus 69 vhFCdICdlPI~iygRmIPCKHVFCydCA~----sDktCP~Cna~VqrIE 114 (493)
.+.|+||..++..++.+.+|+|+||..||. .+.+||.+++.+..-+
T Consensus 3 ~~~CpIs~~~m~dPV~~~~sG~~yer~~I~~~l~~~~~cP~t~~~L~~~~ 52 (61)
T 2bay_A 3 HMLCAISGKVPRRPVLSPKSRTIFEKSLLEQYVKDTGNDPITNEPLSIEE 52 (61)
T ss_dssp -CCCTTTCSCCSSEEEETTTTEEEEHHHHHHHHHHHSBCTTTCCBCCGGG
T ss_pred eEEecCCCCCCCCCEEeCCCCcEEcHHHHHHHHHhCCCCcCCcCCCChhh
Confidence 478999999999998777899999999998 4578999998875443
No 70
>2dmd_A Zinc finger protein 64, isoforms 1 and 2; ZNF338, nuclear protein, DNA- binding, transcription, C2H2-type zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1
Probab=96.07 E-value=0.0014 Score=49.37 Aligned_cols=79 Identities=20% Similarity=0.341 Sum_probs=52.6
Q ss_pred CcccccccCCCccccccccccccccccchhhhhCCCCcccchHhH------hhheeeecCCcEEEecCCchhhhhcChhH
Q 011117 66 GERVHFCVRCDYPIAIYGRLNPCEHVFCLDCARSDSMCYLCDERI------QKIQTIKLMEGIFICAAPHCLKSFLKKTE 139 (493)
Q Consensus 66 gEKvhFCdICdlPI~iygRmIPCKHVFCydCA~sDktCP~Cna~V------qrIEri~p~esIFIC~~~gCkRtYLSqRD 139 (493)
+++.+.|.+|++.|.....+. .|.--. -......|..|.... ..-.+++..+..|.|.. |.+.|.+..+
T Consensus 5 ~~~~~~C~~C~~~f~~~~~l~--~H~~~h-~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~--C~~~f~~~~~ 79 (96)
T 2dmd_A 5 SSGPHKCEVCGKCFSRKDKLK--THMRCH-TGVKPYKCKTCDYAAADSSSLNKHLRIHSDERPFKCQI--CPYASRNSSQ 79 (96)
T ss_dssp CCCCCCBTTTTBCCCCHHHHH--HHGGGC-CCCCSEECSSSCCEESSHHHHHHHHHHSCCCCCEECSS--SSCEESSHHH
T ss_pred CCcCeECCCCCCccCCHHHHH--HHHHhc-CCCCCEeCCCCCCccCCHHHHHHHHHHhCCCCCccCCC--CCCccCCHHH
Confidence 456789999998887766554 443200 001235677776533 22333455677899976 9999999999
Q ss_pred HHHhhhhhhc
Q 011117 140 FEAHIHVSHA 149 (493)
Q Consensus 140 LQAHInhrH~ 149 (493)
|..|++.-|.
T Consensus 80 l~~H~~~h~~ 89 (96)
T 2dmd_A 80 LTVHLRSHTG 89 (96)
T ss_dssp HHHHHTTCCS
T ss_pred HHHHHHHhcC
Confidence 9999876543
No 71
>3uk3_C Zinc finger protein 217; transcription factor, DNA binding, DNA-metal BI protein complex; 2.10A {Homo sapiens}
Probab=95.98 E-value=0.0027 Score=43.70 Aligned_cols=32 Identities=22% Similarity=0.332 Sum_probs=25.7
Q ss_pred eecCCcEEEecCCchhhhhcChhHHHHhhhhhhc
Q 011117 116 IKLMEGIFICAAPHCLKSFLKKTEFEAHIHVSHA 149 (493)
Q Consensus 116 i~p~esIFIC~~~gCkRtYLSqRDLQAHInhrH~ 149 (493)
++..+..|.|.. |.++|.+..+|..|++..|.
T Consensus 26 ~h~~~~~~~C~~--C~~~f~~~~~l~~H~~~hh~ 57 (57)
T 3uk3_C 26 THTGEKPYKCEF--CEYAAAQKTSLRYHLERHHK 57 (57)
T ss_dssp HHHCCCCEECSS--SSCEESSHHHHHHHHHHHC-
T ss_pred HcCCCCCcCCCC--CcchhCCHHHHHHHHHHhcC
Confidence 344566799876 99999999999999987663
No 72
>2d8s_A Cellular modulator of immune recognition; C-MIR, march8, ring domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=95.90 E-value=0.0028 Score=50.67 Aligned_cols=51 Identities=20% Similarity=0.382 Sum_probs=37.6
Q ss_pred ccccccCCCccccc-cccccccc-----cccchhhhh-----C-CCCcccchHhHhhheeeec
Q 011117 68 RVHFCVRCDYPIAI-YGRLNPCE-----HVFCLDCAR-----S-DSMCYLCDERIQKIQTIKL 118 (493)
Q Consensus 68 KvhFCdICdlPI~i-ygRmIPCK-----HVFCydCA~-----s-DktCP~Cna~VqrIEri~p 118 (493)
....|.||-..+.. -..+.||+ |.|..+|+. + ..+||+|+..+.....+++
T Consensus 14 ~~~~C~IC~~~~~~~~~l~~pC~C~Gs~h~fH~~Cl~~Wl~~~~~~~CplCr~~~~~~~~~~P 76 (80)
T 2d8s_A 14 SQDICRICHCEGDDESPLITPCHCTGSLHFVHQACLQQWIKSSDTRCCELCKYEFIMETKLSG 76 (80)
T ss_dssp TSCCCSSSCCCCCSSSCEECSSSCCSSSCCEETTHHHHHHHHHCCSBCSSSCCBCCCCCCSCC
T ss_pred CCCCCeEcCccccCCCeeEeccccCCcCCeeCHHHHHHHHhhCCCCCCCCCCCeeecCcccCC
Confidence 35789999866532 12356997 999999998 2 3689999999876555554
No 73
>2lv2_A Insulinoma-associated protein 1; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative; NMR {Homo sapiens}
Probab=95.80 E-value=0.0035 Score=49.99 Aligned_cols=58 Identities=21% Similarity=0.448 Sum_probs=44.3
Q ss_pred CcccccccCCCccccccccccccccccchhhhhCCCCcccchHhHhhheeeecCCcEEEecCCchhhhhcChhHHHHhhh
Q 011117 66 GERVHFCVRCDYPIAIYGRLNPCEHVFCLDCARSDSMCYLCDERIQKIQTIKLMEGIFICAAPHCLKSFLKKTEFEAHIH 145 (493)
Q Consensus 66 gEKvhFCdICdlPI~iygRmIPCKHVFCydCA~sDktCP~Cna~VqrIEri~p~esIFIC~~~gCkRtYLSqRDLQAHIn 145 (493)
.++.|.|++|++-|..... +.+-.+++..+..|.|.. |.|+|.....|..||+
T Consensus 25 ~~~~h~C~~Cgk~F~~~~~-------------------------L~~H~~~H~~~k~~~C~~--C~k~F~~~~~L~~H~~ 77 (85)
T 2lv2_A 25 SAECHLCPVCGESFASKGA-------------------------QERHLRLLHAAQVFPCKY--CPATFYSSPGLTRHIN 77 (85)
T ss_dssp CCTTEECTTSCCEESSHHH-------------------------HHHHHHTTSCSSSEECTT--SSCEESSHHHHHHHHH
T ss_pred CCCCEECCCCCCCcCcHHH-------------------------HhhhhhhccCCCccCCCC--CCCEeCCHHHHHHhCc
Confidence 3457999999988876443 333344555677899865 9999999999999998
Q ss_pred hhhcc
Q 011117 146 VSHAD 150 (493)
Q Consensus 146 hrH~~ 150 (493)
..|..
T Consensus 78 ~~H~~ 82 (85)
T 2lv2_A 78 KCHPS 82 (85)
T ss_dssp TTCTT
T ss_pred ccCcC
Confidence 88853
No 74
>1wjp_A Zinc finger protein 295; ZF-C2H2 domain, zinc binding, nucleic acid binding, KIAA1227 protein, structural genomics; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1
Probab=95.80 E-value=0.00075 Score=52.44 Aligned_cols=80 Identities=19% Similarity=0.300 Sum_probs=54.1
Q ss_pred hcCcccccccCCCccccccccccccccccchhhhhCCCCcccchHhH------hhheeeecCCcEEEecCCchhhhhcCh
Q 011117 64 QLGERVHFCVRCDYPIAIYGRLNPCEHVFCLDCARSDSMCYLCDERI------QKIQTIKLMEGIFICAAPHCLKSFLKK 137 (493)
Q Consensus 64 qlgEKvhFCdICdlPI~iygRmIPCKHVFCydCA~sDktCP~Cna~V------qrIEri~p~esIFIC~~~gCkRtYLSq 137 (493)
-.+|+.+.|++|++.|.....+. .|.--. .....|..|.... ..-.+ +..+..|.|.. |.+.|.+.
T Consensus 11 h~~~~~~~C~~C~~~f~~~~~l~--~H~~~H---~~~~~C~~C~~~f~~~~~l~~H~~-H~~~~~~~C~~--C~~~f~~~ 82 (107)
T 1wjp_A 11 VENKEVYQCRLCNAKLSSLLEQG--SHERLC---RNAAVCPYCSLRFFSPELKQEHES-KCEYKKLTCLE--CMRTFKSS 82 (107)
T ss_dssp CCCCCCCBCTTTCCBCSSHHHHH--HHHHHH---HHSBCCTTTCCCBSSHHHHHHHHH-HCSTGGGEEGG--GTEECSSH
T ss_pred cCCCcCeECCCCCCccCCHHHHH--HHHHHC---CCCccCCCCCCccCCHHHHHHHHH-cCCCCCccCcc--ccchhCCH
Confidence 45677899999998887655443 332111 1335566665432 22222 55677899976 99999999
Q ss_pred hHHHHhhhhhhccc
Q 011117 138 TEFEAHIHVSHADL 151 (493)
Q Consensus 138 RDLQAHInhrH~~l 151 (493)
.+|+.|++..|..-
T Consensus 83 ~~L~~H~~~~H~~~ 96 (107)
T 1wjp_A 83 FSIWRHQVEVHNQN 96 (107)
T ss_dssp HHHHHHHHHTSCCC
T ss_pred HHHHHHHHHHcCCC
Confidence 99999998777654
No 75
>2d9h_A Zinc finger protein 692; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=95.72 E-value=0.0042 Score=45.59 Aligned_cols=60 Identities=30% Similarity=0.369 Sum_probs=43.8
Q ss_pred CcccccccCCCccccccccccccccccchhhhhCCCCcccchHhHhhheeeec---CCcEEEecCCchhhhhcChhHHHH
Q 011117 66 GERVHFCVRCDYPIAIYGRLNPCEHVFCLDCARSDSMCYLCDERIQKIQTIKL---MEGIFICAAPHCLKSFLKKTEFEA 142 (493)
Q Consensus 66 gEKvhFCdICdlPI~iygRmIPCKHVFCydCA~sDktCP~Cna~VqrIEri~p---~esIFIC~~~gCkRtYLSqRDLQA 142 (493)
+||.+.|++|++-|.....+. .|. +++. .+..|.|.. |.|.|.+...|..
T Consensus 4 ~~k~~~C~~C~k~f~~~~~L~--~H~-----------------------~~h~~~~~~~~~~C~~--C~k~f~~~~~L~~ 56 (78)
T 2d9h_A 4 GSSGLQCEICGFTCRQKASLN--WHQ-----------------------RKHAETVAALRFPCEF--CGKRFEKPDSVAA 56 (78)
T ss_dssp SCCCEECSSSCCEESSHHHHH--HHH-----------------------HHHHHHTTTCCEECTT--TCCEESSHHHHHH
T ss_pred CCcCeECCCCCCeeCCHHHHH--HHH-----------------------HHhhccCCCcccCCCC--CCchhCCHHHHHH
Confidence 577888999988776644333 221 1221 256799876 9999999999999
Q ss_pred hhhhhhcccc
Q 011117 143 HIHVSHADLL 152 (493)
Q Consensus 143 HInhrH~~l~ 152 (493)
|++..|....
T Consensus 57 H~~~~H~~~~ 66 (78)
T 2d9h_A 57 HRSKSHPALL 66 (78)
T ss_dssp HHHHTSTTTS
T ss_pred HHHHhCCCCC
Confidence 9988898763
No 76
>2dmi_A Teashirt homolog 3; zinc finger protein 537, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=95.66 E-value=0.0013 Score=51.35 Aligned_cols=84 Identities=13% Similarity=0.137 Sum_probs=53.1
Q ss_pred hcCcccccccCCCccccccccccccccccc-hhhhh-CCCCcccchHhH--------hhheeeecCCcEEEecCCchhhh
Q 011117 64 QLGERVHFCVRCDYPIAIYGRLNPCEHVFC-LDCAR-SDSMCYLCDERI--------QKIQTIKLMEGIFICAAPHCLKS 133 (493)
Q Consensus 64 qlgEKvhFCdICdlPI~iygRmIPCKHVFC-ydCA~-sDktCP~Cna~V--------qrIEri~p~esIFIC~~~gCkRt 133 (493)
-.+++.+.|++|++-|.....+. .|.-- ..-.. .-..|..|.... ..-.+++..+..|.|.. |.|.
T Consensus 14 H~~~~~~~C~~C~k~f~~~~~L~--~H~~~~~h~~~~~~~~C~~C~~~f~f~~~~~l~~H~~~H~~~~~~~C~~--C~k~ 89 (115)
T 2dmi_A 14 FTGASKFRCKDCSAAYDTLVELT--VHMNETGHYRDDNHETDNNNPKRWSKPRKRSLLEMEGKEDAQKVLKCMY--CGHS 89 (115)
T ss_dssp CCCCCSEEBSSSSCEESSHHHHH--HHHHHTCCCBCSCCCCCCCCCSCCSSCCCCCCCCCCCSCCCCSSCBCSS--SCCB
T ss_pred eCCCCCEECCccCchhcCHHHHH--HHHHHhCccccCCCccCCCCCcccccccHHHHHHHhhccCCCcceECCC--CCCc
Confidence 35677899999998887655443 33220 00000 112366665433 22234455677899875 9999
Q ss_pred hcChhHHHHhhhhhhccc
Q 011117 134 FLKKTEFEAHIHVSHADL 151 (493)
Q Consensus 134 YLSqRDLQAHInhrH~~l 151 (493)
|....+|+.|++..|...
T Consensus 90 f~~~~~L~~H~~~hh~~~ 107 (115)
T 2dmi_A 90 FESLQDLSVHMIKTKHYQ 107 (115)
T ss_dssp CSSHHHHHHHHHHTTTTT
T ss_pred cCCHHHHHHHHHHhCCcc
Confidence 999999999998776554
No 77
>2dlq_A GLI-kruppel family member HKR3; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1
Probab=95.60 E-value=0.0014 Score=50.98 Aligned_cols=82 Identities=22% Similarity=0.441 Sum_probs=44.8
Q ss_pred cCcccccccCCCcccccccccccccccc--chhhhhCCCCcccchHhH------hhheeeecCCcEEEecCCchhhhhcC
Q 011117 65 LGERVHFCVRCDYPIAIYGRLNPCEHVF--CLDCARSDSMCYLCDERI------QKIQTIKLMEGIFICAAPHCLKSFLK 136 (493)
Q Consensus 65 lgEKvhFCdICdlPI~iygRmIPCKHVF--CydCA~sDktCP~Cna~V------qrIEri~p~esIFIC~~~gCkRtYLS 136 (493)
.+++.+.|++|++.|.....+. .|.- +..-......|..|.... ..-.+++..+..|.|.. |.++|.+
T Consensus 31 ~~~~~~~C~~C~~~f~~~~~l~--~H~~~~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~--C~~~f~~ 106 (124)
T 2dlq_A 31 TGEKPFECPKCGKCYFRKENLL--EHEARNCMNRSEQVFTCSVCQETFRRRMELRLHMVSHTGEMPYKCSS--CSQQFMQ 106 (124)
T ss_dssp SSCCSCBCTTTCCBCSSHHHHH--HHHHHCCCCSCCCCEECSSSCCEESSHHHHHHHHHHHSSSCSEECSS--SCCEESS
T ss_pred CCCCCeECCCCCchhcCHHHHH--HHHhhhhcCCCCCCeECCCCCCccCCHHHHHHHHHHcCCCCCccCCC--ccchhCC
Confidence 3455677777776665544333 2321 000001224566665432 22223444566788754 8888888
Q ss_pred hhHHHHhhhhhhcc
Q 011117 137 KTEFEAHIHVSHAD 150 (493)
Q Consensus 137 qRDLQAHInhrH~~ 150 (493)
..+|+.|++..|..
T Consensus 107 ~~~l~~H~~~~H~~ 120 (124)
T 2dlq_A 107 KKDLQSHMIKLHSG 120 (124)
T ss_dssp HHHHHHHHHHTSSC
T ss_pred HHHHHHHHHHHCCC
Confidence 88888888777754
No 78
>1x5w_A Zinc finger protein 64, isoforms 1; ZNF338, nuclear protein, DNA binding, transcription, C2H2 type zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1
Probab=95.58 E-value=0.0066 Score=43.81 Aligned_cols=59 Identities=19% Similarity=0.372 Sum_probs=42.0
Q ss_pred CcccccccCCCccccccccccccccccchhhhhCCCCcccchHhHhhheeeecCCcEEEecCCchhhhhcChhHHHHhhh
Q 011117 66 GERVHFCVRCDYPIAIYGRLNPCEHVFCLDCARSDSMCYLCDERIQKIQTIKLMEGIFICAAPHCLKSFLKKTEFEAHIH 145 (493)
Q Consensus 66 gEKvhFCdICdlPI~iygRmIPCKHVFCydCA~sDktCP~Cna~VqrIEri~p~esIFIC~~~gCkRtYLSqRDLQAHIn 145 (493)
+++.+.|++|++.|.....+. .-.+++..+..|.|.. |.+.|....+|+.|++
T Consensus 6 ~~~~~~C~~C~k~f~~~~~L~-------------------------~H~~~H~~~~~~~C~~--C~~~f~~~~~L~~H~~ 58 (70)
T 1x5w_A 6 SGHPEKCSECSYSCSSKAALR-------------------------IHERIHCTDRPFKCNY--CSFDTKQPSNLSKHMK 58 (70)
T ss_dssp CCCSEECSSSSCEESSHHHHH-------------------------HHHGGGCCSCSEECSS--SSCEESSHHHHHHHHH
T ss_pred CCCCeECCCCCcccCCHHHHH-------------------------HHHHHcCCCCCEeCCC--CCCccCCHHHHHHHHH
Confidence 456788888887776644332 2222344566799876 9999999999999998
Q ss_pred hhhccc
Q 011117 146 VSHADL 151 (493)
Q Consensus 146 hrH~~l 151 (493)
..|..-
T Consensus 59 ~h~~~~ 64 (70)
T 1x5w_A 59 KFHGDM 64 (70)
T ss_dssp HHHSSS
T ss_pred HHhCCC
Confidence 777543
No 79
>1ubd_C Protein (YY1 zinc finger domain); transcription initiation, initiator element, zinc finger protein, DNA- protein recognition; HET: DNA; 2.50A {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1znm_A*
Probab=95.52 E-value=0.0033 Score=49.30 Aligned_cols=31 Identities=23% Similarity=0.428 Sum_probs=19.0
Q ss_pred eecCCcEEEecCCchhhhhcChhHHHHhhhh
Q 011117 116 IKLMEGIFICAAPHCLKSFLKKTEFEAHIHV 146 (493)
Q Consensus 116 i~p~esIFIC~~~gCkRtYLSqRDLQAHInh 146 (493)
++..+..|.|.+..|.++|.+..+|..|++.
T Consensus 56 ~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~ 86 (124)
T 1ubd_C 56 VHTGEKPFQCTFEGCGKRFSLDFNLRTHVRI 86 (124)
T ss_dssp GTSCCCCEECCSTTCCCEESCHHHHHHHHHH
T ss_pred HcCCCCCeeCCCCCCcCccCCHHHHHHHHHH
Confidence 3444556666666666666666666666643
No 80
>2lt7_A Transcriptional regulator kaiso; zinc finger, double helix, metal binding protein-DNA complex; HET: DNA; NMR {Homo sapiens} PDB: 4f6m_A* 4f6n_A*
Probab=95.34 E-value=0.0026 Score=53.55 Aligned_cols=81 Identities=22% Similarity=0.357 Sum_probs=58.0
Q ss_pred cCcccccccCCCccccccccccccccccchhhhhCCCCcccchH------hHhhheeeecCCcEEEecCCchhhhhcChh
Q 011117 65 LGERVHFCVRCDYPIAIYGRLNPCEHVFCLDCARSDSMCYLCDE------RIQKIQTIKLMEGIFICAAPHCLKSFLKKT 138 (493)
Q Consensus 65 lgEKvhFCdICdlPI~iygRmIPCKHVFCydCA~sDktCP~Cna------~VqrIEri~p~esIFIC~~~gCkRtYLSqR 138 (493)
-|||.+.|++|++-|.....+. .|.---. ......|..|.. .+..-.+++..+..|.|.. |.++|.+..
T Consensus 18 ~Gek~y~C~~C~k~F~~~~~L~--~H~~~H~-~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~--C~k~F~~~~ 92 (133)
T 2lt7_A 18 DGRVYYICIVCKRSYVCLTSLR--RHFNIHS-WEKKYPCRYCEKVFPLAEYRTKHEIHHTGERRYQCLA--CGKSFINYQ 92 (133)
T ss_dssp TTEEEEEETTTCCEESCHHHHH--HHHHHHH-CCSCEECSSSSCEESSHHHHHHHHHHHHTCCCEEESS--SCCEESSHH
T ss_pred CCCcCeECCCCCCCcCCHHHHH--HHHHHcC-CCCCeeCCccCeecccccchhhhccccCCCccccCCC--CCCCcCCHH
Confidence 4788899999999888776665 5542100 002356888864 3334445666677899975 999999999
Q ss_pred HHHHhhhhhhcc
Q 011117 139 EFEAHIHVSHAD 150 (493)
Q Consensus 139 DLQAHInhrH~~ 150 (493)
+|..|++..|..
T Consensus 93 ~L~~H~~~hh~~ 104 (133)
T 2lt7_A 93 FMSSHIKSVHSQ 104 (133)
T ss_dssp HHHHHHHHHTCC
T ss_pred HHHHHhHHhcCC
Confidence 999999888864
No 81
>2ee8_A Protein ODD-skipped-related 2; zinc binding, ZF-C2H2 domain, structural genomics, NPPSFA; NMR {Mus musculus} SCOP: k.12.1.1
Probab=95.14 E-value=0.0034 Score=48.15 Aligned_cols=78 Identities=18% Similarity=0.296 Sum_probs=52.2
Q ss_pred cCcccccccCCCccccccccccccccccchhhh-hCCCCcccchHhH------hhheeeecCCcEEEecCCchhhhhcCh
Q 011117 65 LGERVHFCVRCDYPIAIYGRLNPCEHVFCLDCA-RSDSMCYLCDERI------QKIQTIKLMEGIFICAAPHCLKSFLKK 137 (493)
Q Consensus 65 lgEKvhFCdICdlPI~iygRmIPCKHVFCydCA-~sDktCP~Cna~V------qrIEri~p~esIFIC~~~gCkRtYLSq 137 (493)
..++.+.|++|++-|.....+. .|.-- -. .....|..|.... ..-.+++..+..|.|.. |.+.|.+.
T Consensus 13 ~~~~~~~C~~C~~~f~~~~~l~--~H~~~--h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~--C~~~f~~~ 86 (106)
T 2ee8_A 13 KTKKEFICKFCGRHFTKSYNLL--IHERT--HTDERPYTCDICHKAFRRQDHLRDHRYIHSKEKPFKCQE--CGKGFCQS 86 (106)
T ss_dssp CCCCCCBCSSSCCBCSSHHHHH--HHHHH--HCCSCCCBCSSSCCBCSCHHHHHHHGGGSCCCCTTSCSS--SCCCCSSH
T ss_pred CCCcCeECCCCCCccCCHHHHH--HHHHH--cCCCCCcCCCCccchhCCHHHHHHHHHHhCCCCCeECCC--cCCcccCH
Confidence 3456799999998887765554 44310 01 1336788776543 33334555567788875 99999999
Q ss_pred hHHHHhhhhhh
Q 011117 138 TEFEAHIHVSH 148 (493)
Q Consensus 138 RDLQAHInhrH 148 (493)
.+|..|++.-+
T Consensus 87 ~~L~~H~~~H~ 97 (106)
T 2ee8_A 87 RTLAVHKTLHM 97 (106)
T ss_dssp HHHHHHHHHTT
T ss_pred HHHHHHHHHhC
Confidence 99999986433
No 82
>1x6e_A Zinc finger protein 24; ZNF24, KOX17, ZNF191, zscan3, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1
Probab=95.09 E-value=0.011 Score=43.03 Aligned_cols=59 Identities=24% Similarity=0.402 Sum_probs=42.0
Q ss_pred hhcCcccccccCCCccccccccccccccccchhhhhCCCCcccchHhHhhheeeecCCcEEEecCCchhhhhcChhHHHH
Q 011117 63 RQLGERVHFCVRCDYPIAIYGRLNPCEHVFCLDCARSDSMCYLCDERIQKIQTIKLMEGIFICAAPHCLKSFLKKTEFEA 142 (493)
Q Consensus 63 rqlgEKvhFCdICdlPI~iygRmIPCKHVFCydCA~sDktCP~Cna~VqrIEri~p~esIFIC~~~gCkRtYLSqRDLQA 142 (493)
.-.+++.+.|++|++-|.....+. .| .+++..+..|.|.. |.++|.+..+|+.
T Consensus 8 ~H~~~k~~~C~~C~k~f~~~~~L~--~H-----------------------~~~h~~~~~~~C~~--C~~~f~~~~~L~~ 60 (72)
T 1x6e_A 8 IHSGEKPYGCVECGKAFSRSSILV--QH-----------------------QRVHTGEKPYKCLE--CGKAFSQNSGLIN 60 (72)
T ss_dssp TTTTCCCEECSSSCCEESSHHHHH--HH-----------------------HHGGGCSCCEECSS--SCCEESSHHHHHH
T ss_pred ccCCCCCccCCCCCCccCCHHHHH--HH-----------------------HHhcCCCCCeECCC--CCcccCCHHHHHH
Confidence 345678899999988776644333 22 12344466799876 9999999999999
Q ss_pred hhhhhh
Q 011117 143 HIHVSH 148 (493)
Q Consensus 143 HInhrH 148 (493)
|++.-+
T Consensus 61 H~~~H~ 66 (72)
T 1x6e_A 61 HQRIHT 66 (72)
T ss_dssp HHHHHH
T ss_pred HHHhcC
Confidence 987543
No 83
>2dlq_A GLI-kruppel family member HKR3; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1
Probab=95.05 E-value=0.004 Score=48.36 Aligned_cols=78 Identities=18% Similarity=0.319 Sum_probs=52.1
Q ss_pred CcccccccCCCccccccccccccccccchhhhhCCCCcccchHhHh------hhee---eecCCcEEEecCCchhhhhcC
Q 011117 66 GERVHFCVRCDYPIAIYGRLNPCEHVFCLDCARSDSMCYLCDERIQ------KIQT---IKLMEGIFICAAPHCLKSFLK 136 (493)
Q Consensus 66 gEKvhFCdICdlPI~iygRmIPCKHVFCydCA~sDktCP~Cna~Vq------rIEr---i~p~esIFIC~~~gCkRtYLS 136 (493)
+++.+.|++|++-|.....+. .|.- ..-......|..|..... .-.+ .+..+..|.|.. |.++|.+
T Consensus 4 ~~~~~~C~~C~~~f~~~~~l~--~H~~-~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~~~~~~~~~~~C~~--C~~~f~~ 78 (124)
T 2dlq_A 4 GSSGVECPTCHKKFLSKYYLK--VHNR-KHTGEKPFECPKCGKCYFRKENLLEHEARNCMNRSEQVFTCSV--CQETFRR 78 (124)
T ss_dssp CCSSCCCTTTCCCCSSHHHHH--HHHH-HHSSCCSCBCTTTCCBCSSHHHHHHHHHHCCCCSCCCCEECSS--SCCEESS
T ss_pred CCCCCCCCCCCCcCCCHHHHH--HHHH-hCCCCCCeECCCCCchhcCHHHHHHHHhhhhcCCCCCCeECCC--CCCccCC
Confidence 567899999999887766555 4531 000013467888875432 1111 234567899976 9999999
Q ss_pred hhHHHHhhhhhh
Q 011117 137 KTEFEAHIHVSH 148 (493)
Q Consensus 137 qRDLQAHInhrH 148 (493)
..+|+.|++.-|
T Consensus 79 ~~~l~~H~~~h~ 90 (124)
T 2dlq_A 79 RMELRLHMVSHT 90 (124)
T ss_dssp HHHHHHHHHHHS
T ss_pred HHHHHHHHHHcC
Confidence 999999986544
No 84
>2cot_A Zinc finger protein 435; ADK_LID domain, zinc finger and SCAN domain containing protein 16, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1
Probab=94.98 E-value=0.011 Score=43.30 Aligned_cols=58 Identities=22% Similarity=0.414 Sum_probs=41.8
Q ss_pred hhhcCcccccccCCCccccccccccccccccchhhhhCCCCcccchHhHhhheeeecCCcEEEecCCchhhhhcChhHHH
Q 011117 62 RRQLGERVHFCVRCDYPIAIYGRLNPCEHVFCLDCARSDSMCYLCDERIQKIQTIKLMEGIFICAAPHCLKSFLKKTEFE 141 (493)
Q Consensus 62 krqlgEKvhFCdICdlPI~iygRmIPCKHVFCydCA~sDktCP~Cna~VqrIEri~p~esIFIC~~~gCkRtYLSqRDLQ 141 (493)
+...+++.+.|++|++-|.....+. .| .+++..+..|.|.. |.+.|....+|.
T Consensus 11 ~~~~~~~~~~C~~C~~~f~~~~~l~--~H-----------------------~~~h~~~~~~~C~~--C~~~f~~~~~L~ 63 (77)
T 2cot_A 11 WQQRERRRYKCDECGKSFSHSSDLS--KH-----------------------RRTHTGEKPYKCDE--CGKAFIQRSHLI 63 (77)
T ss_dssp SCCCCSCSSBCSSSCCBCSCHHHHH--HH-----------------------HTTTCCSCSEECSS--SCCEESSHHHHH
T ss_pred CcCCCCCCEECCCCCcccCCHHHHH--HH-----------------------HHHcCCCcCeeCCC--CCCccCCHHHHH
Confidence 3456778999999998776644332 22 12333456799875 999999999999
Q ss_pred Hhhhh
Q 011117 142 AHIHV 146 (493)
Q Consensus 142 AHInh 146 (493)
.|++.
T Consensus 64 ~H~~~ 68 (77)
T 2cot_A 64 GHHRV 68 (77)
T ss_dssp HHGGG
T ss_pred HHHHH
Confidence 99864
No 85
>2rpc_A Zinc finger protein ZIC 3; ZF-C2H2, zinc finger protein of the cerebellum 3, disease mutation, DNA-binding, metal-binding, nucleus, polymorphism; NMR {Homo sapiens}
Probab=94.95 E-value=0.0068 Score=49.46 Aligned_cols=30 Identities=27% Similarity=0.486 Sum_probs=18.7
Q ss_pred eecCCcEEEecCCchhhhhcChhHHHHhhh
Q 011117 116 IKLMEGIFICAAPHCLKSFLKKTEFEAHIH 145 (493)
Q Consensus 116 i~p~esIFIC~~~gCkRtYLSqRDLQAHIn 145 (493)
++..+..|.|....|.++|.+..+|+.|++
T Consensus 84 ~h~~~~~~~C~~~~C~~~f~~~~~L~~H~~ 113 (155)
T 2rpc_A 84 VHTGEKPFPCPFPGCGKIFARSENLKIHKR 113 (155)
T ss_dssp HHHCCCSEECSCTTTCCEESCHHHHHHHHT
T ss_pred hcCCCCcccCCcCCCCCccCCHHHHHHHHH
Confidence 344455666666666666666666666655
No 86
>2drp_A Protein (tramtrack DNA-binding domain); protein-DNA complex, double helix, transcription/DNA complex; HET: DNA; 2.80A {Drosophila melanogaster} SCOP: g.37.1.1 g.37.1.1
Probab=94.85 E-value=0.012 Score=41.64 Aligned_cols=58 Identities=22% Similarity=0.455 Sum_probs=40.0
Q ss_pred cCcccccccCCCccccccccccccccccchhhhhCCCCcccchHhHhhheee-e-cCCcEEEecCCchhhhhcChhHHHH
Q 011117 65 LGERVHFCVRCDYPIAIYGRLNPCEHVFCLDCARSDSMCYLCDERIQKIQTI-K-LMEGIFICAAPHCLKSFLKKTEFEA 142 (493)
Q Consensus 65 lgEKvhFCdICdlPI~iygRmIPCKHVFCydCA~sDktCP~Cna~VqrIEri-~-p~esIFIC~~~gCkRtYLSqRDLQA 142 (493)
.+++.+.|++|++-|.....+. .| .+. + ..+..|.|.. |.|.|.+..+|+.
T Consensus 6 ~~~k~~~C~~C~k~f~~~~~l~--~H-----------------------~~~~H~~~~~~~~C~~--C~k~f~~~~~L~~ 58 (66)
T 2drp_A 6 EGEHTYRCKVCSRVYTHISNFC--RH-----------------------YVTSHKRNVKVYPCPF--CFKEFTRKDNMTA 58 (66)
T ss_dssp EETTEEECTTTCCEESSHHHHH--HH-----------------------HHHHSSSSCCCEECTT--TCCEESCHHHHHH
T ss_pred CCCcceECCCCcchhCCHHHHH--HH-----------------------HHHHcCCCCcCeECCC--CCCccCCHHHHHH
Confidence 4567788888887776543332 11 111 2 2466799865 9999999999999
Q ss_pred hhhhhhc
Q 011117 143 HIHVSHA 149 (493)
Q Consensus 143 HInhrH~ 149 (493)
|++..|.
T Consensus 59 H~~~~H~ 65 (66)
T 2drp_A 59 HVKIIHK 65 (66)
T ss_dssp HHHHHTC
T ss_pred HHHHHcC
Confidence 9988775
No 87
>2ct1_A Transcriptional repressor CTCF; CCCTC-BINDING factor, zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1
Probab=94.56 E-value=0.016 Score=42.50 Aligned_cols=63 Identities=19% Similarity=0.368 Sum_probs=44.2
Q ss_pred hhcCcccccccCCCccccccccccccccccchhhhhCCCCcccchHhHhhheeeecC-CcEEEecCCchhhhhcChhHHH
Q 011117 63 RQLGERVHFCVRCDYPIAIYGRLNPCEHVFCLDCARSDSMCYLCDERIQKIQTIKLM-EGIFICAAPHCLKSFLKKTEFE 141 (493)
Q Consensus 63 rqlgEKvhFCdICdlPI~iygRmIPCKHVFCydCA~sDktCP~Cna~VqrIEri~p~-esIFIC~~~gCkRtYLSqRDLQ 141 (493)
.-.+||.+.|++|++-|.....+. .|. ...+.. +..|.|.. |.+.|.+..+|.
T Consensus 9 ~H~~~k~~~C~~C~k~f~~~~~L~--~H~----------------------~~~h~~~~~~~~C~~--C~~~f~~~~~L~ 62 (77)
T 2ct1_A 9 THSGEKPYECYICHARFTQSGTMK--MHI----------------------LQKHTENVAKFHCPH--CDTVIARKSDLG 62 (77)
T ss_dssp CCSCCCSEECTTTCCEESCHHHHH--HHH----------------------HHHSSSSCSSEECSS--SSCEESSHHHHH
T ss_pred ccCCCCCeECCCcCchhCCHHHHH--HHH----------------------HHhcCCCCCccCCCC--CCCccCCHHHHH
Confidence 345678889999988777644433 221 112222 25799876 999999999999
Q ss_pred Hhhhhhhccc
Q 011117 142 AHIHVSHADL 151 (493)
Q Consensus 142 AHInhrH~~l 151 (493)
.|++..|...
T Consensus 63 ~H~~~~H~~~ 72 (77)
T 2ct1_A 63 VHLRKQHSYS 72 (77)
T ss_dssp HHHHHTSCCS
T ss_pred HHHHHhCCCC
Confidence 9999888654
No 88
>2adr_A ADR1; transcription regulation, zinc finger,; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1 g.37.1.1
Probab=94.51 E-value=0.018 Score=39.97 Aligned_cols=34 Identities=18% Similarity=0.344 Sum_probs=27.5
Q ss_pred eecCCcEEEecCCchhhhhcChhHHHHhhhhhhccc
Q 011117 116 IKLMEGIFICAAPHCLKSFLKKTEFEAHIHVSHADL 151 (493)
Q Consensus 116 i~p~esIFIC~~~gCkRtYLSqRDLQAHInhrH~~l 151 (493)
++..+..|.|.. |.+.|.+..+|..|++..|..-
T Consensus 24 ~h~~~~~~~C~~--C~~~f~~~~~l~~H~~~~H~~~ 57 (60)
T 2adr_A 24 SHTNEKPYPCGL--CNRAFTRRDLLIRHAQKIHSGN 57 (60)
T ss_dssp TTTSSCSEECTT--TCCEESSHHHHHHHHTTTSCCS
T ss_pred HhCCCCCccCCC--CCCccCCHHHHHHHHHHHcCCc
Confidence 444566799865 9999999999999998777643
No 89
>1a1h_A QGSR zinc finger peptide; complex (zinc finger/DNA), DNA-binding protein, transcription/DNA complex; HET: DNA; 1.60A {Mus musculus} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1jk2_A 1jk1_A 1a1g_A* 1a1f_A* 1a1i_A* 1a1j_A* 1a1k_A* 1aay_A* 1a1l_A* 1p47_A 1zaa_C* 1g2f_C 1g2d_C
Probab=94.36 E-value=0.0083 Score=44.36 Aligned_cols=76 Identities=22% Similarity=0.395 Sum_probs=46.9
Q ss_pred Cccccccc--CCCccccccccccccccccchhhhhCCCCcccchHhH------hhheeeecCCcEEEecCCchhhhhcCh
Q 011117 66 GERVHFCV--RCDYPIAIYGRLNPCEHVFCLDCARSDSMCYLCDERI------QKIQTIKLMEGIFICAAPHCLKSFLKK 137 (493)
Q Consensus 66 gEKvhFCd--ICdlPI~iygRmIPCKHVFCydCA~sDktCP~Cna~V------qrIEri~p~esIFIC~~~gCkRtYLSq 137 (493)
+||.+.|+ .|++.|.....+. .|.--. -......|..|.... ..-.+++..+..|.|.. |.+.|.+.
T Consensus 1 ~~k~~~C~~~~C~~~f~~~~~l~--~H~~~h-~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~--C~~~f~~~ 75 (90)
T 1a1h_A 1 MERPYACPVESCDRRFSQSGSLT--RHIRIH-TGQKPFQCRICMRNFSRSDHLTTHIRTHTGEKPFACDI--CGRKFARS 75 (90)
T ss_dssp --CCEECCSSSCCCEESSHHHHH--HHHHHH-HCCCCEECTTTCCEESCHHHHHHHHHHHHCCCCEECTT--TCCEESSH
T ss_pred CCCceECCCCCCCCccCCHHHHH--HHHHHh-CCCCCccCCCCCcccCCHHHHHHHHHHcCCCCCccCCC--CCchhCCH
Confidence 45678887 5888777665554 343100 001224677775432 22233455667899875 99999999
Q ss_pred hHHHHhhhh
Q 011117 138 TEFEAHIHV 146 (493)
Q Consensus 138 RDLQAHInh 146 (493)
.+|..|++.
T Consensus 76 ~~l~~H~~~ 84 (90)
T 1a1h_A 76 DERKRHTKI 84 (90)
T ss_dssp HHHHHHHGG
T ss_pred HHHHHHHHH
Confidence 999999864
No 90
>2gli_A Protein (five-finger GLI); protein/DNA complex, transcription/DNA complex; HET: DNA; 2.60A {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1
Probab=94.13 E-value=0.011 Score=47.82 Aligned_cols=34 Identities=21% Similarity=0.411 Sum_probs=20.4
Q ss_pred eecCCcEEEecCCchhhhhcChhHHHHhhhhhhc
Q 011117 116 IKLMEGIFICAAPHCLKSFLKKTEFEAHIHVSHA 149 (493)
Q Consensus 116 i~p~esIFIC~~~gCkRtYLSqRDLQAHInhrH~ 149 (493)
++..+..|.|...+|.++|.+..+|..|++..|.
T Consensus 91 ~h~~~~~~~C~~~~C~~~f~~~~~L~~H~~~~H~ 124 (155)
T 2gli_A 91 SHTGEKPYMCEHEGCSKAFSNASDRAKHQNRTHS 124 (155)
T ss_dssp HTTTCCCEECCSTTCCCEESSSSTTHHHHHHTTC
T ss_pred HcCCCCCeeCCCCCCCCccCCHHHHHHHHHHhcC
Confidence 3444555666666666666666666666655554
No 91
>1ubd_C Protein (YY1 zinc finger domain); transcription initiation, initiator element, zinc finger protein, DNA- protein recognition; HET: DNA; 2.50A {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1znm_A*
Probab=94.13 E-value=0.0054 Score=48.10 Aligned_cols=79 Identities=24% Similarity=0.534 Sum_probs=53.4
Q ss_pred CcccccccCCCccccccccccccccccchhhhhCCCCccc--chHh------HhhheeeecCCcEEEecCCchhhhhcCh
Q 011117 66 GERVHFCVRCDYPIAIYGRLNPCEHVFCLDCARSDSMCYL--CDER------IQKIQTIKLMEGIFICAAPHCLKSFLKK 137 (493)
Q Consensus 66 gEKvhFCdICdlPI~iygRmIPCKHVFCydCA~sDktCP~--Cna~------VqrIEri~p~esIFIC~~~gCkRtYLSq 137 (493)
+++.+.|++|++.|.....+. .|.--. -......|.. |... +..-.+++..+..|.|....|.++|.+.
T Consensus 31 ~~~~~~C~~C~~~f~~~~~l~--~H~~~h-~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~~~C~~~f~~~ 107 (124)
T 1ubd_C 31 GPRVHVCAECGKAFVESSKLK--RHQLVH-TGEKPFQCTFEGCGKRFSLDFNLRTHVRIHTGDRPYVCPFDGCNKKFAQS 107 (124)
T ss_dssp SCCCEECTTTCCEESSHHHHH--HHGGGT-SCCCCEECCSTTCCCEESCHHHHHHHHHHHHCCCCCCCCSTTCCCCCSST
T ss_pred CCCCeECCCCCchhCCHHHHH--HHHHHc-CCCCCeeCCCCCCcCccCCHHHHHHHHHHhCCCCceECCCCCCCCccCCH
Confidence 667889999998887765554 343200 0012246764 6543 3333345666778999999999999999
Q ss_pred hHHHHhhhhh
Q 011117 138 TEFEAHIHVS 147 (493)
Q Consensus 138 RDLQAHInhr 147 (493)
.+|..|++.-
T Consensus 108 ~~L~~H~~~H 117 (124)
T 1ubd_C 108 TNLKSHILTH 117 (124)
T ss_dssp TTTHHHHHHH
T ss_pred HHHHHHHHHH
Confidence 9999998753
No 92
>2gqj_A Zinc finger protein KIAA1196; ZF-C2H2 like domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=94.12 E-value=0.006 Score=47.51 Aligned_cols=62 Identities=18% Similarity=0.316 Sum_probs=42.9
Q ss_pred hhcCcccccccCCCcccc-ccccccccccccchhhhhCCCCcccchHhHhhheeeecC-CcEEEecCCchhhhhcChhHH
Q 011117 63 RQLGERVHFCVRCDYPIA-IYGRLNPCEHVFCLDCARSDSMCYLCDERIQKIQTIKLM-EGIFICAAPHCLKSFLKKTEF 140 (493)
Q Consensus 63 rqlgEKvhFCdICdlPI~-iygRmIPCKHVFCydCA~sDktCP~Cna~VqrIEri~p~-esIFIC~~~gCkRtYLSqRDL 140 (493)
.-.+++.+.|++|++-|. ....+. .|. +++.. +..|.|.. |.|.|.+...|
T Consensus 18 ~h~~~~~~~C~~C~k~f~~~~~~L~--~H~-----------------------~~h~~~~~~~~C~~--C~k~F~~~~~L 70 (98)
T 2gqj_A 18 AIHERGEAVCPTCNVVTRKTLVGLK--KHM-----------------------EVCQKLQDALKCQH--CRKQFKSKAGL 70 (98)
T ss_dssp TTTTTSCCCCTTTCCCCSSCSHHHH--HHH-----------------------HHHHHHHHHHSCSS--SCCCCSCHHHH
T ss_pred HhccCCCcCCCCCCCChhhhHHHHH--HHH-----------------------HHHcCCCCCEECCC--CCCccCCHHHH
Confidence 345678899999998887 544333 332 11112 34577765 99999999999
Q ss_pred HHhhhhhhccc
Q 011117 141 EAHIHVSHADL 151 (493)
Q Consensus 141 QAHInhrH~~l 151 (493)
+.|++..|..-
T Consensus 71 ~~H~~~h~~~k 81 (98)
T 2gqj_A 71 NYHTMAEHSAK 81 (98)
T ss_dssp HHHHHHHSCSC
T ss_pred HHHHHHHcCCC
Confidence 99998777554
No 93
>2lce_A B-cell lymphoma 6 protein; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative; NMR {Homo sapiens}
Probab=94.09 E-value=0.026 Score=41.04 Aligned_cols=55 Identities=22% Similarity=0.475 Sum_probs=39.9
Q ss_pred cCcccccccCCCccccccccccccccccchhhhhCCCCcccchHhHhhheeeecCCcEEEecCCchhhhhcChhHHHHhh
Q 011117 65 LGERVHFCVRCDYPIAIYGRLNPCEHVFCLDCARSDSMCYLCDERIQKIQTIKLMEGIFICAAPHCLKSFLKKTEFEAHI 144 (493)
Q Consensus 65 lgEKvhFCdICdlPI~iygRmIPCKHVFCydCA~sDktCP~Cna~VqrIEri~p~esIFIC~~~gCkRtYLSqRDLQAHI 144 (493)
.+++.+.|++|++-|.....+. .| .+++..+..|.|.. |.|.|.+..+|+.|+
T Consensus 13 ~~~~~~~C~~C~k~f~~~~~l~--~H-----------------------~~~H~~~~~~~C~~--C~k~f~~~~~L~~H~ 65 (74)
T 2lce_A 13 HSDKPYKCDRCQASFRYKGNLA--SH-----------------------KTVHTGEKPYRCNI--CGAQFNRPANLKTHT 65 (74)
T ss_dssp CCCCSBCCTTSSCCBSCHHHHH--HH-----------------------HHHHCCCCSEECTT--TCCEESCHHHHHHHH
T ss_pred CCCCCeECCCCCceeCCHHHHH--HH-----------------------HHHcCCCCCEECCC--CCchhCCHHHHHHHH
Confidence 4567899999998877644333 22 22344456799875 999999999999998
Q ss_pred hh
Q 011117 145 HV 146 (493)
Q Consensus 145 nh 146 (493)
+.
T Consensus 66 ~~ 67 (74)
T 2lce_A 66 RI 67 (74)
T ss_dssp HH
T ss_pred Hh
Confidence 64
No 94
>2gli_A Protein (five-finger GLI); protein/DNA complex, transcription/DNA complex; HET: DNA; 2.60A {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1
Probab=93.98 E-value=0.016 Score=46.92 Aligned_cols=82 Identities=22% Similarity=0.474 Sum_probs=56.8
Q ss_pred hcCcccccccC--CCccccccccccccccccchhhhhCCCCccc--chHhHh------h-heeeecCCcEEEecCCchhh
Q 011117 64 QLGERVHFCVR--CDYPIAIYGRLNPCEHVFCLDCARSDSMCYL--CDERIQ------K-IQTIKLMEGIFICAAPHCLK 132 (493)
Q Consensus 64 qlgEKvhFCdI--CdlPI~iygRmIPCKHVFCydCA~sDktCP~--Cna~Vq------r-IEri~p~esIFIC~~~gCkR 132 (493)
-.+++.+.|++ |++-|.....+. .|.--. -......|.. |..... . +.+++..+..|.|..++|.+
T Consensus 62 h~~~~~~~C~~~~C~~~f~~~~~l~--~H~~~h-~~~~~~~C~~~~C~~~f~~~~~L~~H~~~~H~~~~~~~C~~~~C~~ 138 (155)
T 2gli_A 62 HTGEKPHKCTFEGCRKSYSRLENLK--THLRSH-TGEKPYMCEHEGCSKAFSNASDRAKHQNRTHSNEKPYVCKLPGCTK 138 (155)
T ss_dssp HHCCCCCCCCSTTCCCCCSSHHHHH--HHHHHT-TTCCCEECCSTTCCCEESSSSTTHHHHHHTTCSCCCEECCSTTTCC
T ss_pred cCCCCCccCCCCCCCCcccCHHHHH--HHHHHc-CCCCCeeCCCCCCCCccCCHHHHHHHHHHhcCCCCCeeCCCCCCcc
Confidence 45677899986 999888766554 443210 0012356776 764332 1 22456667889999999999
Q ss_pred hhcChhHHHHhhhhhh
Q 011117 133 SFLKKTEFEAHIHVSH 148 (493)
Q Consensus 133 tYLSqRDLQAHInhrH 148 (493)
+|.+..+|..|++..|
T Consensus 139 ~f~~~~~L~~H~~~hh 154 (155)
T 2gli_A 139 RYTDPSSLRKHVKTVH 154 (155)
T ss_dssp EESSHHHHHHHHHHSC
T ss_pred ccCCHHHHHHHHHhhc
Confidence 9999999999998766
No 95
>4gzn_C ZFP-57, zinc finger protein 57; transcription-DNA complex; HET: DNA 5CM; 0.99A {Mus musculus}
Probab=93.91 E-value=0.022 Score=42.64 Aligned_cols=55 Identities=25% Similarity=0.414 Sum_probs=41.8
Q ss_pred cccccccCCCccccccccccccccccchhhhhCCCCcccchHhHhhheeeecCCcEEEecCCchhhhhcChhHHHHhhhh
Q 011117 67 ERVHFCVRCDYPIAIYGRLNPCEHVFCLDCARSDSMCYLCDERIQKIQTIKLMEGIFICAAPHCLKSFLKKTEFEAHIHV 146 (493)
Q Consensus 67 EKvhFCdICdlPI~iygRmIPCKHVFCydCA~sDktCP~Cna~VqrIEri~p~esIFIC~~~gCkRtYLSqRDLQAHInh 146 (493)
||-+.|++|++-|..... +..-.+++..+..|.|.. |.|+|....+|..|++.
T Consensus 2 EKpy~C~~C~k~F~~~~~-------------------------L~~H~~~Ht~ekp~~C~~--C~k~F~~~~~L~~H~~~ 54 (60)
T 4gzn_C 2 ERPFFCNFCGKTYRDASG-------------------------LSRHRRAHLGYRPRSCPE--CGKCFRDQSEVNRHLKV 54 (60)
T ss_dssp CCCEECTTTCCEESSHHH-------------------------HHHHHHHHHTCCCEECTT--TCCEESSHHHHHHHGGG
T ss_pred CCCccCCCCCCEeCCHHH-------------------------HHHHHHHhCCCcCeECCC--CCCCcCCHHHHHHHhCc
Confidence 677888888877766433 334445677788999865 99999999999999864
Q ss_pred hhc
Q 011117 147 SHA 149 (493)
Q Consensus 147 rH~ 149 (493)
|.
T Consensus 55 -Ht 56 (60)
T 4gzn_C 55 -HQ 56 (60)
T ss_dssp -GS
T ss_pred -cC
Confidence 64
No 96
>1x3c_A Zinc finger protein 292; DNA binding, nuclear protein, C2H2-type zinc finger, KIAA0530, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1
Probab=93.90 E-value=0.02 Score=46.83 Aligned_cols=46 Identities=20% Similarity=0.283 Sum_probs=39.2
Q ss_pred CCcEEEecCCchhhhhcChhHHHHhhhhhhccccCCccccccc-ccc
Q 011117 119 MEGIFICAAPHCLKSFLKKTEFEAHIHVSHADLLLQPNAEKED-NES 164 (493)
Q Consensus 119 ~esIFIC~~~gCkRtYLSqRDLQAHInhrH~~l~Lqpn~~ke~-ne~ 164 (493)
.|.-|.|..++|.|.|....+|+.|++..|..-+.+...+++| +|+
T Consensus 24 GEKPYkC~~~~CgKaFsr~s~L~~H~rriHTgEKP~~~~~~~~~~~~ 70 (73)
T 1x3c_A 24 PYRPYRCVHQGCFAAFTIQQNLILHYQAVHKSDLPAFSAEVEEESGP 70 (73)
T ss_dssp SSCSCBCCSTTCCCBCSSHHHHHHHHHHHSSSCCCCCCCSCCCCCCC
T ss_pred CCCCeECCCCCcChhHcCHHHHHHHhhhhCCCCCCcccccccccccc
Confidence 4667999999999999999999999877798877888888777 553
No 97
>2epa_A Krueppel-like factor 10; transforming growth factor-beta-inducible early growth response protein 1, TGFB-inducible early growth response protein 1; NMR {Homo sapiens}
Probab=93.72 E-value=0.025 Score=40.82 Aligned_cols=31 Identities=23% Similarity=0.391 Sum_probs=24.7
Q ss_pred eeecCCcEEEecCCchhhhhcChhHHHHhhh
Q 011117 115 TIKLMEGIFICAAPHCLKSFLKKTEFEAHIH 145 (493)
Q Consensus 115 ri~p~esIFIC~~~gCkRtYLSqRDLQAHIn 145 (493)
+++..+..|.|.+..|.|.|....+|..|++
T Consensus 40 ~~H~~~~~~~C~~~~C~k~f~~~~~l~~H~~ 70 (72)
T 2epa_A 40 RTHTGEKPFSCSWKGCERRFARSDELSRHRR 70 (72)
T ss_dssp HHHSSSCSEECCCTTCCCEESSHHHHHHHTT
T ss_pred HhcCCCCCccCCCCCCCcccCCHHHHHhHhh
Confidence 3455566789988889999999999999874
No 98
>2jp9_A Wilms tumor 1; DNA binding, nucleic acid recognition, X-RAY; HET: DNA; NMR {Homo sapiens} PDB: 2jpa_A* 2prt_A*
Probab=93.61 E-value=0.014 Score=45.03 Aligned_cols=30 Identities=30% Similarity=0.500 Sum_probs=20.5
Q ss_pred eecCCcEEEecCCchhhhhcChhHHHHhhh
Q 011117 116 IKLMEGIFICAAPHCLKSFLKKTEFEAHIH 145 (493)
Q Consensus 116 i~p~esIFIC~~~gCkRtYLSqRDLQAHIn 145 (493)
++..+..|.|..+.|.++|.+..+|..|++
T Consensus 88 ~h~~~~~~~C~~~~C~~~f~~~~~L~~H~~ 117 (119)
T 2jp9_A 88 THTGEKPFSCRWPSCQKKFARSDELVRHHN 117 (119)
T ss_dssp HHHTCCCEECCSTTCCCEESSHHHHHHHHH
T ss_pred HhcCCCCeeCCCCCCccccCCHHHHHHHHh
Confidence 444556677766677777777777777764
No 99
>2dlk_A Novel protein; ZF-C2H2 domain, zinc finger protein 692, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1
Probab=93.32 E-value=0.049 Score=39.48 Aligned_cols=31 Identities=29% Similarity=0.579 Sum_probs=26.6
Q ss_pred eecCCcEEEecCCchhhhhcChhHHHHhhhh
Q 011117 116 IKLMEGIFICAAPHCLKSFLKKTEFEAHIHV 146 (493)
Q Consensus 116 i~p~esIFIC~~~gCkRtYLSqRDLQAHInh 146 (493)
.+..+..|.|..++|.|+|.+..+|+.|++.
T Consensus 32 ~H~~~~~~~C~~~~C~k~f~~~~~L~~H~~~ 62 (79)
T 2dlk_A 32 QHIHQKSFSCPEPACGKSFNFKKHLKEHMKL 62 (79)
T ss_dssp GGGSCCCEECSCTTTCCEESSHHHHHHHHHH
T ss_pred HhCCCCCeECCCCCCcCccCCHHHHHHHHHH
Confidence 3455778999999999999999999999874
No 100
>2kmk_A Zinc finger protein GFI-1; tandem repeat zinc finger domain, protein-DNA complex, DNA-B metal-binding, nucleus; HET: DNA; NMR {Rattus norvegicus}
Probab=93.26 E-value=0.016 Score=41.96 Aligned_cols=72 Identities=21% Similarity=0.353 Sum_probs=41.5
Q ss_pred ccccCCCccccccccccccccccchhhhhCCCCcccchHhH------hhheeeecCCcEEEecCCchhhhhcChhHHHHh
Q 011117 70 HFCVRCDYPIAIYGRLNPCEHVFCLDCARSDSMCYLCDERI------QKIQTIKLMEGIFICAAPHCLKSFLKKTEFEAH 143 (493)
Q Consensus 70 hFCdICdlPI~iygRmIPCKHVFCydCA~sDktCP~Cna~V------qrIEri~p~esIFIC~~~gCkRtYLSqRDLQAH 143 (493)
+.|.+|++.|.....+. .|.--. -......|..|.... ..-.+++..+..|.|.. |.++|.+..+|..|
T Consensus 2 ~~C~~C~~~f~~~~~l~--~H~~~h-~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~--C~~~f~~~~~l~~H 76 (82)
T 2kmk_A 2 FDCKICGKSFKRSSTLS--THLLIH-SDTRPYPCQYCGKRFHQKSDMKKHTFIHTGEKPHKCQV--CGKAFSQSSNLITH 76 (82)
T ss_dssp EECSSSCCEESSHHHHH--HHHHHH-HTCCCEECSSSCCEESSHHHHHHHHHHHHTCCCEECTT--TSCEESSHHHHHHH
T ss_pred ccCCCCcccccCchhHH--HHHHHc-CCCCCeeCCcCChhhCCHHHHHHHHHHhcCCCCCcCCC--cchhhCChHHHHHH
Confidence 35777776665544443 332100 000224566654332 22223444567899875 99999999999999
Q ss_pred hhh
Q 011117 144 IHV 146 (493)
Q Consensus 144 Inh 146 (493)
++.
T Consensus 77 ~~~ 79 (82)
T 2kmk_A 77 SRK 79 (82)
T ss_dssp HHH
T ss_pred HHh
Confidence 864
No 101
>1llm_C Chimera of ZIF23-GCN4; dimerization, DNA recognition, leucine zipper, X-RAY crystallography, structure-based design, zinc fingers; 1.50A {Mus musculus} SCOP: g.37.1.1 g.37.1.1 PDB: 1xf7_A
Probab=93.18 E-value=0.035 Score=41.64 Aligned_cols=79 Identities=11% Similarity=0.164 Sum_probs=41.1
Q ss_pred cccccccCCCccccccccccccccccchhhhhCCCCcccchHhHhh------heeeecCCcEEEecCCchhhhhcChhHH
Q 011117 67 ERVHFCVRCDYPIAIYGRLNPCEHVFCLDCARSDSMCYLCDERIQK------IQTIKLMEGIFICAAPHCLKSFLKKTEF 140 (493)
Q Consensus 67 EKvhFCdICdlPI~iygRmIPCKHVFCydCA~sDktCP~Cna~Vqr------IEri~p~esIFIC~~~gCkRtYLSqRDL 140 (493)
||.+.|++|++.|.....+. .|.-- .-......|..|...... -.+++- +..|.| ..|.+.|.+..+|
T Consensus 1 ek~~~C~~C~k~f~~~~~L~--~H~~~-H~~~~~~~C~~C~k~f~~~~~L~~H~~~h~-~~~~~c--~~C~~~f~~~~~L 74 (88)
T 1llm_C 1 MKPFQCRICMRNFSRSDHLT--THIRT-HTGEKPFACDICGRKFARSDERKRHRDIQH-ILPILE--DKVEELLSKNYHL 74 (88)
T ss_dssp CCCEECTTTCCEESCHHHHH--HHHHH-HHCCCCEECTTTCCEESSHHHHHHHHHHHT-HHHHHH--HHHHHHHHHHHHH
T ss_pred CCCCcCCCCCCccCCHHHHH--HHHHH-cCCCCCccCCCCCCccCCHHHHHHHHHHhC-CCcchH--HHHHHHHHHHhhh
Confidence 46788999998887655444 34210 000022455555433221 111111 223444 3577777777777
Q ss_pred HHhhhhhhccc
Q 011117 141 EAHIHVSHADL 151 (493)
Q Consensus 141 QAHInhrH~~l 151 (493)
+.||+..|...
T Consensus 75 ~~H~~~~h~~~ 85 (88)
T 1llm_C 75 ENEVARLKKLV 85 (88)
T ss_dssp HHHHHHHHHHT
T ss_pred HHHHHHHHHHh
Confidence 77777766543
No 102
>2ctd_A Zinc finger protein 512; zinc binding, two ZF-C2H2 domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1
Probab=92.54 E-value=0.031 Score=44.27 Aligned_cols=61 Identities=18% Similarity=0.274 Sum_probs=43.1
Q ss_pred hhcCcccccccCCCccc-cccccccccccccchhhhhCCCCcccchHhHhhheeeecCCcEEEecCCchhhhhcChhHHH
Q 011117 63 RQLGERVHFCVRCDYPI-AIYGRLNPCEHVFCLDCARSDSMCYLCDERIQKIQTIKLMEGIFICAAPHCLKSFLKKTEFE 141 (493)
Q Consensus 63 rqlgEKvhFCdICdlPI-~iygRmIPCKHVFCydCA~sDktCP~Cna~VqrIEri~p~esIFIC~~~gCkRtYLSqRDLQ 141 (493)
...+++.+.|++|++-| .....+. .-.+++ .+.-|.|.. |.|.|....+|.
T Consensus 28 ~~~~~~~~~C~~C~k~F~~~~~~L~-------------------------~H~~~h-~~k~~~C~~--Cgk~F~~~~~L~ 79 (96)
T 2ctd_A 28 EIVDKGSVSCPTCQAVGRKTIEGLK-------------------------KHMENC-KQEMFTCHH--CGKQLRSLAGMK 79 (96)
T ss_dssp HHHHTSCEECTTTCSCEESSHHHHH-------------------------HHHHHH-CCCCCCCSS--SCCCCSSHHHHH
T ss_pred HhcCCCCcCCCCCCCCcccCHHHHH-------------------------HHHHHH-CCCCeECCC--CCCeeCCHHHHH
Confidence 45567789999999887 5543332 222234 456788764 999999999999
Q ss_pred Hhhhhhhccc
Q 011117 142 AHIHVSHADL 151 (493)
Q Consensus 142 AHInhrH~~l 151 (493)
.|+...|...
T Consensus 80 ~H~~~~H~~~ 89 (96)
T 2ctd_A 80 YHVMANHNSL 89 (96)
T ss_dssp HHHHHHTCCC
T ss_pred HHhHHhcCCC
Confidence 9966667543
No 103
>2ct0_A Non-SMC element 1 homolog; ring domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=92.08 E-value=0.063 Score=42.94 Aligned_cols=49 Identities=18% Similarity=0.400 Sum_probs=39.6
Q ss_pred hhcCcccccccCCCccccccccccccccccchhhhh----C--CCCcccchHhHh
Q 011117 63 RQLGERVHFCVRCDYPIAIYGRLNPCEHVFCLDCAR----S--DSMCYLCDERIQ 111 (493)
Q Consensus 63 rqlgEKvhFCdICdlPI~iygRmIPCKHVFCydCA~----s--DktCP~Cna~Vq 111 (493)
....+.+..|.||...|..-.+-.-|+|.|=..|+. . ..+||+|+....
T Consensus 9 ~~y~~~i~~C~IC~~~i~~g~~C~~C~h~fH~~Ci~kWl~~~~~~~CP~Cr~~w~ 63 (74)
T 2ct0_A 9 ETYPDAVKICNICHSLLIQGQSCETCGIRMHLPCVAKYFQSNAEPRCPHCNDYWP 63 (74)
T ss_dssp CCCSSSSCBCSSSCCBCSSSEECSSSCCEECHHHHHHHSTTCSSCCCTTTCSCCC
T ss_pred hhccCCCCcCcchhhHcccCCccCCCCchhhHHHHHHHHHhcCCCCCCCCcCcCC
Confidence 456677899999998887666666799999999997 2 378999997754
No 104
>2rpc_A Zinc finger protein ZIC 3; ZF-C2H2, zinc finger protein of the cerebellum 3, disease mutation, DNA-binding, metal-binding, nucleus, polymorphism; NMR {Homo sapiens}
Probab=92.03 E-value=0.025 Score=46.09 Aligned_cols=76 Identities=18% Similarity=0.297 Sum_probs=50.1
Q ss_pred ccccCCCccccccccccccccccchhhhhCCCCccc--chHhH------hhheeeecCCcEEEecCCchhhhhcChhHHH
Q 011117 70 HFCVRCDYPIAIYGRLNPCEHVFCLDCARSDSMCYL--CDERI------QKIQTIKLMEGIFICAAPHCLKSFLKKTEFE 141 (493)
Q Consensus 70 hFCdICdlPI~iygRmIPCKHVFCydCA~sDktCP~--Cna~V------qrIEri~p~esIFIC~~~gCkRtYLSqRDLQ 141 (493)
+.|.+|++.|.....+. .|.--. -......|.. |.... ..-.+++..+..|.|.+..|.|.|.+..+|.
T Consensus 63 ~~C~~C~~~f~~~~~l~--~H~~~h-~~~~~~~C~~~~C~~~f~~~~~L~~H~~~h~~~~~~~C~~~~C~k~f~~~~~L~ 139 (155)
T 2rpc_A 63 EECPREGKSFKAKYKLV--NHIRVH-TGEKPFPCPFPGCGKIFARSENLKIHKRTHTGEKPFKCEFEGCDRRFANSSDRK 139 (155)
T ss_dssp TTCTTSSCCCSSHHHHH--HHTHHH-HCCCSEECSCTTTCCEESCHHHHHHHHTTTCSSCSBCCSSTTCCCCBSSHHHHH
T ss_pred cCCCCcccccCCHHHHH--HHHHhc-CCCCcccCCcCCCCCccCCHHHHHHHHHhhCCCCCccCCCCCCCCccCCHHHHH
Confidence 67888888776655444 343200 0002356776 76433 3334456567789999999999999999999
Q ss_pred Hhhhhhh
Q 011117 142 AHIHVSH 148 (493)
Q Consensus 142 AHInhrH 148 (493)
.|++.-|
T Consensus 140 ~H~~~H~ 146 (155)
T 2rpc_A 140 KHMHVHT 146 (155)
T ss_dssp HSSTTTT
T ss_pred HHHHHhc
Confidence 9987433
No 105
>1tf6_A Protein (transcription factor IIIA); complex (transcription regulation/DNA), RNA polymerase III, transcription initiation, zinc finger protein; HET: DNA; 3.10A {Xenopus laevis} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1tf3_A
Probab=91.73 E-value=0.033 Score=46.99 Aligned_cols=21 Identities=24% Similarity=0.445 Sum_probs=13.2
Q ss_pred cCcccccc--cCCCccccccccc
Q 011117 65 LGERVHFC--VRCDYPIAIYGRL 85 (493)
Q Consensus 65 lgEKvhFC--dICdlPI~iygRm 85 (493)
.+++.+.| ++|++-|.....+
T Consensus 38 ~~~~~~~C~~~~C~~~f~~~~~l 60 (190)
T 1tf6_A 38 TGEKPFPCKEEGCEKGFTSLHHL 60 (190)
T ss_dssp HCCCSSCCSSTTCCCCCSSHHHH
T ss_pred CCCCCccCCCCCCChhhCCHHHH
Confidence 45667777 7787766554433
No 106
>2i13_A AART; DNA binding, zinc finger, DNA binding protein-DNA complex; 1.96A {Mus musculus} SCOP: k.12.1.1 PDB: 1mey_C*
Probab=91.62 E-value=0.03 Score=47.26 Aligned_cols=30 Identities=27% Similarity=0.434 Sum_probs=18.9
Q ss_pred ecCCcEEEecCCchhhhhcChhHHHHhhhhhh
Q 011117 117 KLMEGIFICAAPHCLKSFLKKTEFEAHIHVSH 148 (493)
Q Consensus 117 ~p~esIFIC~~~gCkRtYLSqRDLQAHInhrH 148 (493)
+..+..|.|. .|.++|.+..+|..|++.-+
T Consensus 100 h~~~~~~~C~--~C~~~f~~~~~l~~H~~~h~ 129 (190)
T 2i13_A 100 HTGEKPYACP--ECGKSFSQLAHLRAHQRTHT 129 (190)
T ss_dssp HHTCCCEECT--TTCCEESSHHHHHHHHHHHH
T ss_pred cCCCCCCcCC--CCCCccCCHHHHHHHHHHhC
Confidence 3345567764 37777777777777765433
No 107
>1tf6_A Protein (transcription factor IIIA); complex (transcription regulation/DNA), RNA polymerase III, transcription initiation, zinc finger protein; HET: DNA; 3.10A {Xenopus laevis} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1tf3_A
Probab=91.57 E-value=0.063 Score=45.29 Aligned_cols=83 Identities=17% Similarity=0.291 Sum_probs=49.1
Q ss_pred hcCcccccc--cCCCccccccccccccccccchhhhhCCCCc--ccchHhH------hhheeeecCCcEEEecCCchhhh
Q 011117 64 QLGERVHFC--VRCDYPIAIYGRLNPCEHVFCLDCARSDSMC--YLCDERI------QKIQTIKLMEGIFICAAPHCLKS 133 (493)
Q Consensus 64 qlgEKvhFC--dICdlPI~iygRmIPCKHVFCydCA~sDktC--P~Cna~V------qrIEri~p~esIFIC~~~gCkRt 133 (493)
...++.+.| ++|++-|.....+. .|.-= .-......| ..|.... ..-.+++..+..|.|....|.+.
T Consensus 7 ~~~~~~~~C~~~~C~~~f~~~~~L~--~H~~~-h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~~~C~~~ 83 (190)
T 1tf6_A 7 PVVYKRYICSFADCGAAYNKNWKLQ--AHLCK-HTGEKPFPCKEEGCEKGFTSLHHLTRHSLTHTGEKNFTCDSDGCDLR 83 (190)
T ss_dssp ---CCCCBCSSTTTCCBCSSHHHHH--HHHHH-HHCCCSSCCSSTTCCCCCSSHHHHHHHHTTTTTCCCEECCSSSCCCE
T ss_pred cCCCcceeCCCCCCcchhCCHHHHH--HHHHh-cCCCCCccCCCCCCChhhCCHHHHHHHHHHccCCCceeCCCCCCCCc
Confidence 345678999 78999887765554 34310 000022456 5665432 22233444556788877778888
Q ss_pred hcChhHHHHhhhhhhc
Q 011117 134 FLKKTEFEAHIHVSHA 149 (493)
Q Consensus 134 YLSqRDLQAHInhrH~ 149 (493)
|.+...|+.|++..|.
T Consensus 84 f~~~~~l~~H~~~~h~ 99 (190)
T 1tf6_A 84 FTTKANMKKHFNRFHN 99 (190)
T ss_dssp ESCHHHHHHHHHTTSS
T ss_pred cCCHHHHHHHHHHhcC
Confidence 8888888888766663
No 108
>2i13_A AART; DNA binding, zinc finger, DNA binding protein-DNA complex; 1.96A {Mus musculus} SCOP: k.12.1.1 PDB: 1mey_C*
Probab=91.49 E-value=0.03 Score=47.22 Aligned_cols=44 Identities=23% Similarity=0.432 Sum_probs=26.9
Q ss_pred CCcccchHhHh------hheeeecCCcEEEecCCchhhhhcChhHHHHhhhh
Q 011117 101 SMCYLCDERIQ------KIQTIKLMEGIFICAAPHCLKSFLKKTEFEAHIHV 146 (493)
Q Consensus 101 ktCP~Cna~Vq------rIEri~p~esIFIC~~~gCkRtYLSqRDLQAHInh 146 (493)
..|..|..... .-.+++..+..|.|. .|.++|.+..+|..|++.
T Consensus 106 ~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~--~C~~~f~~~~~L~~H~~~ 155 (190)
T 2i13_A 106 YACPECGKSFSQLAHLRAHQRTHTGEKPYKCP--ECGKSFSREDNLHTHQRT 155 (190)
T ss_dssp EECTTTCCEESSHHHHHHHHHHHHCCCCEECT--TTCCEESCHHHHHHHHHH
T ss_pred CcCCCCCCccCCHHHHHHHHHHhCCCCCeECC--CCCcccCCHHHHHHHHHh
Confidence 45777764332 222334455677775 477777777777777754
No 109
>1x6h_A Transcriptional repressor CTCF; zinc finger protein, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1
Probab=91.09 E-value=0.14 Score=37.35 Aligned_cols=65 Identities=20% Similarity=0.418 Sum_probs=42.3
Q ss_pred hcCcccccccCCCccccccccccccccccchhhhhCCCCcccchHhHhhheeeecCCcEEEecCCchhhhhcChhHHHHh
Q 011117 64 QLGERVHFCVRCDYPIAIYGRLNPCEHVFCLDCARSDSMCYLCDERIQKIQTIKLMEGIFICAAPHCLKSFLKKTEFEAH 143 (493)
Q Consensus 64 qlgEKvhFCdICdlPI~iygRmIPCKHVFCydCA~sDktCP~Cna~VqrIEri~p~esIFIC~~~gCkRtYLSqRDLQAH 143 (493)
-.+++.+.|++|++-|.....+. .|.- ........+..|.|.. |.+.|.+..+|..|
T Consensus 10 H~~~k~~~C~~C~~~f~~~~~l~--~H~~-------------------~~~~~~~~~~~~~C~~--C~~~f~~~~~L~~H 66 (86)
T 1x6h_A 10 HTGEKPYACSHCDKTFRQKQLLD--MHFK-------------------RYHDPNFVPAAFVCSK--CGKTFTRRNTMARH 66 (86)
T ss_dssp CCCCCCEECSSSSCEESSHHHHH--HHHH-------------------HTTCSSCCCCCEECSS--SCCEESCHHHHHHH
T ss_pred ecCCCCCcCCCCCCccCCHHHHH--HHHH-------------------HhcCCcCCCcceECCC--CCChhCCHHHHHHH
Confidence 35677888999988776644333 2211 0000000135799875 99999999999999
Q ss_pred hhhhhccc
Q 011117 144 IHVSHADL 151 (493)
Q Consensus 144 InhrH~~l 151 (493)
++..|..-
T Consensus 67 ~~~h~~~~ 74 (86)
T 1x6h_A 67 ADNCAGPD 74 (86)
T ss_dssp HHHCCCCC
T ss_pred HHHccCCC
Confidence 98766654
No 110
>2jp9_A Wilms tumor 1; DNA binding, nucleic acid recognition, X-RAY; HET: DNA; NMR {Homo sapiens} PDB: 2jpa_A* 2prt_A*
Probab=91.07 E-value=0.11 Score=40.00 Aligned_cols=78 Identities=18% Similarity=0.362 Sum_probs=49.1
Q ss_pred CcccccccC--CCccccccccccccccccchhhhhCCCCcc--cchHhH------hhheeeecCCcEEEecCCchhhhhc
Q 011117 66 GERVHFCVR--CDYPIAIYGRLNPCEHVFCLDCARSDSMCY--LCDERI------QKIQTIKLMEGIFICAAPHCLKSFL 135 (493)
Q Consensus 66 gEKvhFCdI--CdlPI~iygRmIPCKHVFCydCA~sDktCP--~Cna~V------qrIEri~p~esIFIC~~~gCkRtYL 135 (493)
+++.+.|.+ |++-|.....+. .|.-- .-......|. .|.... ..-.+++..+..|.|.. |.++|.
T Consensus 3 ~~~~~~C~~~~C~~~f~~~~~l~--~H~~~-h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~--C~~~f~ 77 (119)
T 2jp9_A 3 EKRPFMCAYPGCNKRYFKLSHLQ--MHSRK-HTGEKPYQCDFKDCERRFSRSDQLKRHQRRHTGVKPFQCKT--CQRKFS 77 (119)
T ss_dssp SSCCBCCCSTTSCCCBSCHHHHH--HHHHH-HHTTCCEECCSTTCCCEESSHHHHHHHHHHHHCCCCEECTT--TCCEES
T ss_pred CCeeeeCCCCCCcchhCCHHHHH--HHHHh-hCCCCCccCCCCCCcCccCCHHHHHHHHHHcCCCCCccCCc--cCchhC
Confidence 567899987 998887766554 44320 0011234676 565432 23233455567788864 999999
Q ss_pred ChhHHHHhhhhhh
Q 011117 136 KKTEFEAHIHVSH 148 (493)
Q Consensus 136 SqRDLQAHInhrH 148 (493)
+..+|+.|++.-+
T Consensus 78 ~~~~l~~H~~~h~ 90 (119)
T 2jp9_A 78 RSDHLKTHTRTHT 90 (119)
T ss_dssp CHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHhc
Confidence 9999999987543
No 111
>2ebt_A Krueppel-like factor 5; C2H2-type zinc-finger, metal BIND, transcription factor, kruppel-like factor, GC-box promoter elements, structural genomics; NMR {Homo sapiens}
Probab=90.72 E-value=0.12 Score=38.69 Aligned_cols=77 Identities=21% Similarity=0.402 Sum_probs=40.9
Q ss_pred hcCcccccccC--CCccccccccccccccccchhhhhCCCCcc--cchHh------HhhheeeecCCcEEEecCCchhhh
Q 011117 64 QLGERVHFCVR--CDYPIAIYGRLNPCEHVFCLDCARSDSMCY--LCDER------IQKIQTIKLMEGIFICAAPHCLKS 133 (493)
Q Consensus 64 qlgEKvhFCdI--CdlPI~iygRmIPCKHVFCydCA~sDktCP--~Cna~------VqrIEri~p~esIFIC~~~gCkRt 133 (493)
...++.+.|++ |++.|.....+. .|.-- .-......|+ .|... +..-.+++..+..|.|.. |.+.
T Consensus 10 ~~~~~~~~C~~~~C~~~f~~~~~l~--~H~~~-h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~--C~~~ 84 (100)
T 2ebt_A 10 LEKRRIHYCDYPGCTKVYTKSSHLK--AHLRT-HTGEKPYKCTWEGCDWRFARSDELTRHYRKHTGAKPFQCGV--CNRS 84 (100)
T ss_dssp CCSCCCEECCSSSCCCEESCHHHHH--HHHHH-HSCCCCEECCSSSCCCEESSHHHHHHHHHHHTSCCSCBCSS--SCCB
T ss_pred cccCcceEcCCCCCCCcccCHHHHH--HHHHH-hCCCCCeeCCCCCCCCccCCHHHHHHHHHHhCCCCCeECCC--CcCc
Confidence 34456889997 998887655544 33310 0000223443 24322 222223444455666655 7777
Q ss_pred hcChhHHHHhhh
Q 011117 134 FLKKTEFEAHIH 145 (493)
Q Consensus 134 YLSqRDLQAHIn 145 (493)
|.+..+|..|++
T Consensus 85 f~~~~~l~~H~~ 96 (100)
T 2ebt_A 85 FSRSDHLALHMK 96 (100)
T ss_dssp CSSHHHHHHHHH
T ss_pred cCCHHHHHHHHH
Confidence 777777777754
No 112
>2j7j_A Transcription factor IIIA; zinc finger module, alternative initiation, nuclear protein, phosphorylation, hydrophobic core, zinc, RNA-binding; 1.65A {Xenopus laevis} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1un6_B 2hgh_A
Probab=90.37 E-value=0.11 Score=37.50 Aligned_cols=26 Identities=19% Similarity=0.276 Sum_probs=19.7
Q ss_pred EEecCCc-hhhhhcChhHHHHhhhhhh
Q 011117 123 FICAAPH-CLKSFLKKTEFEAHIHVSH 148 (493)
Q Consensus 123 FIC~~~g-CkRtYLSqRDLQAHInhrH 148 (493)
|.|...+ |.+.|.+..+|..|++..|
T Consensus 59 ~~C~~~~~C~~~f~~~~~l~~H~~~hh 85 (85)
T 2j7j_A 59 YPCKKDDSCSFVGKTWTLYLKHVAECH 85 (85)
T ss_dssp EECCSCSSCCCEESSHHHHHHHHHHCC
T ss_pred CCCCCCCCCCCccCCHHHHHHHHHhcC
Confidence 7887655 8888888888888876544
No 113
>1bhi_A CRE-BP1, ATF-2; CRE binding protein, transcriptional activation domain, Zn finger, DNA-binding regulatory protein; NMR {Homo sapiens} SCOP: g.37.1.1
Probab=90.34 E-value=0.12 Score=32.65 Aligned_cols=28 Identities=29% Similarity=0.635 Sum_probs=24.6
Q ss_pred CCcEEEecCCchhhhhcChhHHHHhhhh
Q 011117 119 MEGIFICAAPHCLKSFLKKTEFEAHIHV 146 (493)
Q Consensus 119 ~esIFIC~~~gCkRtYLSqRDLQAHInh 146 (493)
.+.-|.|..+.|.|.|.+...|+.|++.
T Consensus 3 ~~k~~~C~~~~C~k~f~~~~~L~~H~~~ 30 (38)
T 1bhi_A 3 DDKPFLCTAPGCGQRFTNEDHLAVHKHK 30 (38)
T ss_dssp TCCCEECCCTTTCCEESSHHHHHHHHHH
T ss_pred CCcceECCCCCCCcccCCHHHHHHHHHH
Confidence 3567999999999999999999999854
No 114
>1va1_A Transcription factor SP1; C2H2 type zinc finger, DNA-binding protein; NMR {Homo sapiens}
Probab=90.23 E-value=0.12 Score=33.07 Aligned_cols=28 Identities=25% Similarity=0.427 Sum_probs=24.8
Q ss_pred CCcEEEecCCchhhhhcChhHHHHhhhh
Q 011117 119 MEGIFICAAPHCLKSFLKKTEFEAHIHV 146 (493)
Q Consensus 119 ~esIFIC~~~gCkRtYLSqRDLQAHInh 146 (493)
.+..|.|..+.|.|.|.+...|+.|++.
T Consensus 5 ~~k~~~C~~~~C~k~f~~~~~L~~H~~~ 32 (37)
T 1va1_A 5 KKKQHICHIQGCGKVYGKTSHLRAHLRW 32 (37)
T ss_dssp SCCCEECCSTTCCCEESCHHHHHHHHHH
T ss_pred CCCCCCCCCCCCCCccCCHHHHHHHHHh
Confidence 4667999999999999999999999763
No 115
>2drp_A Protein (tramtrack DNA-binding domain); protein-DNA complex, double helix, transcription/DNA complex; HET: DNA; 2.80A {Drosophila melanogaster} SCOP: g.37.1.1 g.37.1.1
Probab=89.94 E-value=0.13 Score=36.18 Aligned_cols=35 Identities=23% Similarity=0.421 Sum_probs=28.6
Q ss_pred heeeecCCcEEEecCCchhhhhcChhHHHHhhhhhhc
Q 011117 113 IQTIKLMEGIFICAAPHCLKSFLKKTEFEAHIHVSHA 149 (493)
Q Consensus 113 IEri~p~esIFIC~~~gCkRtYLSqRDLQAHInhrH~ 149 (493)
|++++..+..|.|.. |.|+|.+..+|+.|++..|.
T Consensus 1 i~~~h~~~k~~~C~~--C~k~f~~~~~l~~H~~~~H~ 35 (66)
T 2drp_A 1 MEFTKEGEHTYRCKV--CSRVYTHISNFCRHYVTSHK 35 (66)
T ss_dssp --CEEEETTEEECTT--TCCEESSHHHHHHHHHHHSS
T ss_pred CccccCCCcceECCC--CcchhCCHHHHHHHHHHHcC
Confidence 466777788999864 99999999999999987773
No 116
>2dlk_A Novel protein; ZF-C2H2 domain, zinc finger protein 692, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1
Probab=89.78 E-value=0.14 Score=37.07 Aligned_cols=31 Identities=19% Similarity=0.380 Sum_probs=27.5
Q ss_pred CcEEEecCCchhhhhcChhHHHHhhhhhhcc
Q 011117 120 EGIFICAAPHCLKSFLKKTEFEAHIHVSHAD 150 (493)
Q Consensus 120 esIFIC~~~gCkRtYLSqRDLQAHInhrH~~ 150 (493)
+..|.|..+.|.++|.+..+|+.|++..|..
T Consensus 5 ~~~~~C~~~~C~~~f~~~~~L~~H~~~~H~~ 35 (79)
T 2dlk_A 5 SSGMPCDFPGCGRIFSNRQYLNHHKKYQHIH 35 (79)
T ss_dssp CSSEECSSTTTCCEESSHHHHHHHHHHGGGS
T ss_pred CCCccCCCCCCcCccCCHHHHHHHHHHHhCC
Confidence 5679999999999999999999999866754
No 117
>1bbo_A Human enhancer-binding protein MBP-1; DNA-binding protein; HET: ABA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 PDB: 3znf_A 4znf_A
Probab=89.60 E-value=0.14 Score=34.88 Aligned_cols=32 Identities=19% Similarity=0.284 Sum_probs=25.5
Q ss_pred eeecCCcEEEecCCchhhhhcChhHHHHhhhhhh
Q 011117 115 TIKLMEGIFICAAPHCLKSFLKKTEFEAHIHVSH 148 (493)
Q Consensus 115 ri~p~esIFIC~~~gCkRtYLSqRDLQAHInhrH 148 (493)
+++..+..|.|.. |.++|.+..+|..|++..|
T Consensus 22 ~~h~~~~~~~C~~--C~~~f~~~~~l~~H~~~h~ 53 (57)
T 1bbo_A 22 RTHTDVRPYHCTY--CNFSFKTKGNLTKHMKSKA 53 (57)
T ss_dssp HHTSSCCCEECSS--SSCEESSHHHHHHHHHSSS
T ss_pred HhcCCCCCccCCC--CCchhcCHHHHHHHHHHhc
Confidence 3455567899876 9999999999999986544
No 118
>2wbs_A Krueppel-like factor 4; transcription-DNA complex, DNA-binding, transcription, metal-binding, DNA, protein, nucleus, activator; 1.70A {Mus musculus} PDB: 2wbu_A
Probab=89.54 E-value=0.2 Score=36.70 Aligned_cols=74 Identities=16% Similarity=0.323 Sum_probs=38.4
Q ss_pred cccccccC--CCccccccccccccccccchhhhhCCCCcc--cchHh------HhhheeeecCCcEEEecCCchhhhhcC
Q 011117 67 ERVHFCVR--CDYPIAIYGRLNPCEHVFCLDCARSDSMCY--LCDER------IQKIQTIKLMEGIFICAAPHCLKSFLK 136 (493)
Q Consensus 67 EKvhFCdI--CdlPI~iygRmIPCKHVFCydCA~sDktCP--~Cna~------VqrIEri~p~esIFIC~~~gCkRtYLS 136 (493)
++.+.|++ |++.|.....+. .|.--. -......|+ .|... +..-.+++..+..|.|.. |.+.|.+
T Consensus 3 ~~~~~C~~~~C~~~f~~~~~l~--~H~~~h-~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~--C~~~f~~ 77 (89)
T 2wbs_A 3 TATHTCDYAGCGKTYTKSSHLK--AHLRTH-TGEKPYHCDWDGCGWKFARSDELTRHYRKHTGHRPFQCQK--CDRAFSR 77 (89)
T ss_dssp CCCEECCSTTTCCEESSHHHHH--HHHTTS-CSSCCEECCSTTTCCEESSHHHHHHHHHHHHCCCCEECSS--SSCEESS
T ss_pred CCCeeCCCCCCCCcCCCHHHHH--HHHHhc-CCCCCcCCCCCCCCCccCCHHHHHHHHHHcCCCCCccCCC--CCcccCC
Confidence 45788988 988877655443 332100 000123454 35332 122223344455677653 7777777
Q ss_pred hhHHHHhhh
Q 011117 137 KTEFEAHIH 145 (493)
Q Consensus 137 qRDLQAHIn 145 (493)
..+|..|++
T Consensus 78 ~~~l~~H~~ 86 (89)
T 2wbs_A 78 SDHLALHMK 86 (89)
T ss_dssp HHHHHHHGG
T ss_pred HHHHHHHHH
Confidence 777777754
No 119
>2ab3_A ZNF29; zinc finger protein, beta BETA alpha, RREIIB-TR, RNA binding protein; NMR {Escherichia coli} SCOP: k.12.1.1 PDB: 2ab7_A
Probab=89.11 E-value=0.19 Score=29.34 Aligned_cols=25 Identities=20% Similarity=0.673 Sum_probs=22.0
Q ss_pred EEEecCCchhhhhcChhHHHHhhhh
Q 011117 122 IFICAAPHCLKSFLKKTEFEAHIHV 146 (493)
Q Consensus 122 IFIC~~~gCkRtYLSqRDLQAHInh 146 (493)
.|.|....|.|.|.+..+|..|++.
T Consensus 2 ~~~C~~~~C~k~f~~~~~l~~H~~~ 26 (29)
T 2ab3_A 2 VYVCHFENCGRSFNDRRKLNRHKKI 26 (29)
T ss_dssp CEEECSTTTCEEESSHHHHHHHHGG
T ss_pred CCCCcCCcCcCccCCHHHHHHHHHH
Confidence 3789888999999999999999754
No 120
>2ghf_A ZHX1, zinc fingers and homeoboxes protein 1; C2H2 zinc fingers, 4-stranded parallel/anti-parallel beta- sheet, structural genomics; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1
Probab=89.02 E-value=0.19 Score=41.13 Aligned_cols=60 Identities=15% Similarity=0.250 Sum_probs=40.8
Q ss_pred cCcccccccCCCccccccccccccccccchhhhhCCCCcccchHhHhhheeee---cCCcEEEecCCchhhhhcChhHHH
Q 011117 65 LGERVHFCVRCDYPIAIYGRLNPCEHVFCLDCARSDSMCYLCDERIQKIQTIK---LMEGIFICAAPHCLKSFLKKTEFE 141 (493)
Q Consensus 65 lgEKvhFCdICdlPI~iygRmIPCKHVFCydCA~sDktCP~Cna~VqrIEri~---p~esIFIC~~~gCkRtYLSqRDLQ 141 (493)
.||+.+.|+.|++-|.....+. .|. ..++ ..+.-|.|.. |.|+|.....|.
T Consensus 14 ~gekpy~C~~Cgk~F~~~~~L~--~H~----------------------r~~H~~~~~ekpf~C~~--Cgk~F~~~~~L~ 67 (102)
T 2ghf_A 14 KVEGGYECKYCTFQTPDLNMFT--FHV----------------------DSEHPNVVLNSSYVCVE--CNFLTKRYDALS 67 (102)
T ss_dssp CCCSSEECSSCSCEESCHHHHH--HHH----------------------HHHCSSCCCSCCEEETT--TTEEESSTHHHH
T ss_pred CCCcCcCCCCCCCccCCHHHHH--HHH----------------------HhhCCCCCCCCCcCCCC--CCcccCCHHHHH
Confidence 5778899999988776644332 121 1123 2355799875 999999999999
Q ss_pred Hhhhhhhcc
Q 011117 142 AHIHVSHAD 150 (493)
Q Consensus 142 AHInhrH~~ 150 (493)
.|+...|..
T Consensus 68 ~H~~r~Htg 76 (102)
T 2ghf_A 68 EHNLKYHPG 76 (102)
T ss_dssp THHHHTSTT
T ss_pred HHHHHhcCC
Confidence 995445654
No 121
>2j7j_A Transcription factor IIIA; zinc finger module, alternative initiation, nuclear protein, phosphorylation, hydrophobic core, zinc, RNA-binding; 1.65A {Xenopus laevis} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1un6_B 2hgh_A
Probab=88.74 E-value=0.14 Score=37.08 Aligned_cols=35 Identities=17% Similarity=0.235 Sum_probs=28.9
Q ss_pred eeecCCcEEEecCCchhhhhcChhHHHHhhhhhhc
Q 011117 115 TIKLMEGIFICAAPHCLKSFLKKTEFEAHIHVSHA 149 (493)
Q Consensus 115 ri~p~esIFIC~~~gCkRtYLSqRDLQAHInhrH~ 149 (493)
+++..+..|.|...+|.++|.+..+|+.|++.-+.
T Consensus 24 ~~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~ 58 (85)
T 2j7j_A 24 FSHTQQLPYECPHEGCDKRFSLPSRLKRHEKVHAG 58 (85)
T ss_dssp HHHHTTCCEECCSTTCCCEESSHHHHHHHHHHHHS
T ss_pred HHhCCCCCeeCCCCCCcCccCCHHHHHHHHHHhCC
Confidence 34556778999999999999999999999866444
No 122
>2wbt_A B-129; zinc finger; 2.70A {Sulfolobus virus 1}
Probab=88.71 E-value=0.1 Score=41.51 Aligned_cols=29 Identities=24% Similarity=0.402 Sum_probs=23.4
Q ss_pred CcEEEecCCchhhhhcChhHHHHhhhhhhcc
Q 011117 120 EGIFICAAPHCLKSFLKKTEFEAHIHVSHAD 150 (493)
Q Consensus 120 esIFIC~~~gCkRtYLSqRDLQAHInhrH~~ 150 (493)
+.-|.|.. |.|.|.+..+|..|++..|..
T Consensus 98 ~~~~~C~~--C~k~f~~~~~l~~H~~~h~~~ 126 (129)
T 2wbt_A 98 EHTKVCPV--CKKEFTSTDSALDHVCKKHNI 126 (129)
T ss_dssp CCCCBCTT--TCCBCSSHHHHHHHHHHTTCC
T ss_pred CCCCCCCC--CCcccCCHHHHHHHHHHHCCc
Confidence 45588765 999999999999998877754
No 123
>1sp2_A SP1F2; zinc finger, transcription activation; NMR {Homo sapiens} SCOP: g.37.1.1 PDB: 1va2_A
Probab=87.96 E-value=0.12 Score=31.31 Aligned_cols=24 Identities=29% Similarity=0.639 Sum_probs=21.3
Q ss_pred EEecCCchhhhhcChhHHHHhhhh
Q 011117 123 FICAAPHCLKSFLKKTEFEAHIHV 146 (493)
Q Consensus 123 FIC~~~gCkRtYLSqRDLQAHInh 146 (493)
|.|....|.|+|.+..+|+.|++.
T Consensus 3 ~~C~~~~C~k~f~~~~~L~~H~~~ 26 (31)
T 1sp2_A 3 FMCTWSYCGKRFTRSDELQRHKRT 26 (31)
T ss_dssp CBCCSTTCCCBCSSHHHHHHHHTT
T ss_pred cCCcCCCCCcccCCHhHHHHHHHH
Confidence 778878999999999999999754
No 124
>3iuf_A Zinc finger protein UBI-D4; structural genomics consortium (SGC), C2H2, APO metal-binding, nucleus, phosphoprotein, transcription, TRAN regulation; 1.80A {Homo sapiens}
Probab=87.76 E-value=0.22 Score=34.13 Aligned_cols=32 Identities=19% Similarity=0.359 Sum_probs=26.1
Q ss_pred ecCCcEEEecCCchhhhhcChhHHHHhhhhhhcc
Q 011117 117 KLMEGIFICAAPHCLKSFLKKTEFEAHIHVSHAD 150 (493)
Q Consensus 117 ~p~esIFIC~~~gCkRtYLSqRDLQAHInhrH~~ 150 (493)
+..+.-|.|.. |.|.|.....|+.|++..|..
T Consensus 2 Ht~~kp~~C~~--C~k~F~~~~~L~~H~~~~H~~ 33 (48)
T 3iuf_A 2 EDRDKPYACDI--CGKRYKNRPGLSYHYAHSHLA 33 (48)
T ss_dssp CTTTSCEECTT--TCCEESSHHHHHHHHHHSSCC
T ss_pred CCCCcCEECCC--cCcccCCHHHHHHHhhhhcCC
Confidence 34566799976 999999999999998856754
No 125
>1f2i_G Fusion of N-terminal 17-MER peptide extension to ZIF12; zinc finger, dimer, protein-DNA complex, cooperativity, transcription/DNA complex; 2.35A {Mus musculus} SCOP: g.37.1.1 g.37.1.1
Probab=87.49 E-value=0.23 Score=35.65 Aligned_cols=25 Identities=24% Similarity=0.651 Sum_probs=17.4
Q ss_pred CCcEEEecCCchhhhhcChhHHHHhhh
Q 011117 119 MEGIFICAAPHCLKSFLKKTEFEAHIH 145 (493)
Q Consensus 119 ~esIFIC~~~gCkRtYLSqRDLQAHIn 145 (493)
.+..|.|.. |.|+|....+|..|++
T Consensus 46 ~~~~~~C~~--C~~~f~~~~~l~~H~~ 70 (73)
T 1f2i_G 46 GQKPFQCRI--CMRNFSRSDHLTTHIR 70 (73)
T ss_dssp CCCCEECTT--TCCEESCHHHHHHHHT
T ss_pred CCCCeECCC--CCchhCCHHHHHHHHH
Confidence 345577654 7777777777777764
No 126
>2ent_A Krueppel-like factor 15; zinc binding, transcription factor, adipogenesis, CLCNKA, chloride channel Ka, rhodopsin, IRBP; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=87.47 E-value=0.22 Score=32.96 Aligned_cols=31 Identities=26% Similarity=0.352 Sum_probs=26.8
Q ss_pred eecCCcEEEecCCchhhhhcChhHHHHhhhh
Q 011117 116 IKLMEGIFICAAPHCLKSFLKKTEFEAHIHV 146 (493)
Q Consensus 116 i~p~esIFIC~~~gCkRtYLSqRDLQAHInh 146 (493)
++..+..|.|..+.|.|.|.....|..|++.
T Consensus 6 ~H~~~k~~~C~~~~C~k~f~~~~~L~~H~~~ 36 (48)
T 2ent_A 6 SGTGEKPFACTWPGCGWRFSRSDELSRHRRS 36 (48)
T ss_dssp SSCCCCCEECCSSSCCCEESSHHHHHHHHTT
T ss_pred CcCCCCCeECCCCCCCCccCCHHHHHHHHHH
Confidence 4556778999988999999999999999754
No 127
>1f2i_G Fusion of N-terminal 17-MER peptide extension to ZIF12; zinc finger, dimer, protein-DNA complex, cooperativity, transcription/DNA complex; 2.35A {Mus musculus} SCOP: g.37.1.1 g.37.1.1
Probab=86.80 E-value=0.28 Score=35.15 Aligned_cols=34 Identities=18% Similarity=0.447 Sum_probs=28.8
Q ss_pred heeeecCCcEEEecCCchhhhhcChhHHHHhhhh
Q 011117 113 IQTIKLMEGIFICAAPHCLKSFLKKTEFEAHIHV 146 (493)
Q Consensus 113 IEri~p~esIFIC~~~gCkRtYLSqRDLQAHInh 146 (493)
+..++..+..|.|.+..|.|+|.+..+|..|++.
T Consensus 10 ~~~~~~~~~~~~C~~~~C~k~f~~~~~l~~H~~~ 43 (73)
T 1f2i_G 10 LNYVVPKMRPYACPVESCDRRFSRSDELTRHIRI 43 (73)
T ss_dssp TSCCCCCCCCEECSSTTBCCEESSHHHHHHHHHH
T ss_pred hhccCCCCCccCCcCCCCCCccCCHHHHHHHHHh
Confidence 3445566788999999999999999999999864
No 128
>1ncs_A Peptide M30F, transcriptional factor SWI5; DNA binding motif, transcription regulation, zinc-finger; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1
Probab=86.33 E-value=0.25 Score=33.47 Aligned_cols=30 Identities=27% Similarity=0.656 Sum_probs=26.7
Q ss_pred ecCCcEEEecCCchhhhhcChhHHHHhhhh
Q 011117 117 KLMEGIFICAAPHCLKSFLKKTEFEAHIHV 146 (493)
Q Consensus 117 ~p~esIFIC~~~gCkRtYLSqRDLQAHInh 146 (493)
+..+.-|.|.++.|.|+|.....|..|++.
T Consensus 13 H~~~k~~~C~~~~C~k~F~~~~~L~~H~~~ 42 (47)
T 1ncs_A 13 EMPDKTFECLFPGCTKTFKRRYNIRSHIQT 42 (47)
T ss_dssp EETTTEEECCCTTCCCEECSSSSHHHHHHH
T ss_pred cCCCCCeECCCCCCCCccCCHHHHHHHHHH
Confidence 556789999999999999999999999764
No 129
>2eln_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=86.10 E-value=0.3 Score=33.66 Aligned_cols=27 Identities=22% Similarity=0.346 Sum_probs=24.2
Q ss_pred CCcEEEecCCchhhhhcChhHHHHhhh
Q 011117 119 MEGIFICAAPHCLKSFLKKTEFEAHIH 145 (493)
Q Consensus 119 ~esIFIC~~~gCkRtYLSqRDLQAHIn 145 (493)
.+.-|.|..+.|.|+|.....|+.|++
T Consensus 6 gekp~~C~~~~C~k~F~~~~~L~~H~r 32 (38)
T 2eln_A 6 SGILLKCPTDGCDYSTPDKYKLQAHLK 32 (38)
T ss_dssp CCCCEECSSSSCCCEESCHHHHHHHHH
T ss_pred CCCCCCCCCCCCCCccCCHHHHHHHHH
Confidence 456799999999999999999999975
No 130
>2elm_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=85.66 E-value=0.43 Score=30.39 Aligned_cols=33 Identities=18% Similarity=0.408 Sum_probs=25.9
Q ss_pred eecCCcEEEecCCchhhhhcChhHHHHhhhhhhcc
Q 011117 116 IKLMEGIFICAAPHCLKSFLKKTEFEAHIHVSHAD 150 (493)
Q Consensus 116 i~p~esIFIC~~~gCkRtYLSqRDLQAHInhrH~~ 150 (493)
++..+.-|.|. .|.|+|....+|..|+...|..
T Consensus 3 ~H~~~k~~~C~--~C~k~f~~~~~L~~H~~~~H~~ 35 (37)
T 2elm_A 3 SGSSGHLYYCS--QCHYSSITKNCLKRHVIQKHSN 35 (37)
T ss_dssp SSSSSCEEECS--SSSCEEECHHHHHHHHHHHTCC
T ss_pred ccCCCcCeECC--CCCcccCCHHHHHHHHHHHccC
Confidence 34567789986 4999999999999995555654
No 131
>1zfd_A SWI5; DNA binding motif, zinc finger DNA binding domain; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1
Probab=85.43 E-value=0.2 Score=30.41 Aligned_cols=25 Identities=24% Similarity=0.614 Sum_probs=21.8
Q ss_pred EEEecCCchhhhhcChhHHHHhhhh
Q 011117 122 IFICAAPHCLKSFLKKTEFEAHIHV 146 (493)
Q Consensus 122 IFIC~~~gCkRtYLSqRDLQAHInh 146 (493)
-|.|..+.|.|+|.+..+|..|++.
T Consensus 3 ~~~C~~~~C~k~f~~~~~L~~H~~~ 27 (32)
T 1zfd_A 3 PYSCDHPGCDKAFVRNHDLIRHKKS 27 (32)
T ss_dssp SBCCCCTTCCCCBSSSHHHHHHHGG
T ss_pred CCcCcCCCCCCccCCHHHHHHHHHH
Confidence 4778878899999999999999764
No 132
>2epa_A Krueppel-like factor 10; transforming growth factor-beta-inducible early growth response protein 1, TGFB-inducible early growth response protein 1; NMR {Homo sapiens}
Probab=85.24 E-value=0.37 Score=34.58 Aligned_cols=29 Identities=28% Similarity=0.556 Sum_probs=25.6
Q ss_pred cCCcEEEecCCchhhhhcChhHHHHhhhh
Q 011117 118 LMEGIFICAAPHCLKSFLKKTEFEAHIHV 146 (493)
Q Consensus 118 p~esIFIC~~~gCkRtYLSqRDLQAHInh 146 (493)
.....|+|..++|.|+|.+..+|+.|++.
T Consensus 13 ~~~~~~~C~~~~C~k~f~~~~~L~~H~~~ 41 (72)
T 2epa_A 13 SRIRSHICSHPGCGKTYFKSSHLKAHTRT 41 (72)
T ss_dssp CCCCCEECSSTTTCCEESSHHHHHHHHHH
T ss_pred cccCceeCCCCCCccccCCHHHHHHHHHh
Confidence 34568999999999999999999999864
No 133
>3i2d_A E3 SUMO-protein ligase SIZ1; signal transduction, replication, ring E3, PIAS, ubiquitin, UBC9, metal-binding, nucleus; 2.60A {Saccharomyces cerevisiae}
Probab=84.28 E-value=0.35 Score=49.15 Aligned_cols=50 Identities=20% Similarity=0.372 Sum_probs=41.3
Q ss_pred cccccCCCccccccccccccccccchhhhh--------CCCCcccchHhHhhheeeecCCcEEEe
Q 011117 69 VHFCVRCDYPIAIYGRLNPCEHVFCLDCAR--------SDSMCYLCDERIQKIQTIKLMEGIFIC 125 (493)
Q Consensus 69 vhFCdICdlPI~iygRmIPCKHVFCydCA~--------sDktCP~Cna~VqrIEri~p~esIFIC 125 (493)
.+.|++-...|.+++|-.-|+|.-|+|-.. ..-.||.|+..+ ..++|.|+
T Consensus 249 SL~CPlS~~ri~~PvRg~~C~HlQCFDl~sfL~~~~~~~~W~CPIC~k~~-------~~~dL~ID 306 (371)
T 3i2d_A 249 SLQCPISYTRMKYPSKSINCKHLQCFDALWFLHSQLQIPTWQCPVCQIDI-------ALENLAIS 306 (371)
T ss_dssp ESBCTTTSSBCSSEEEETTCCSSCCEEHHHHHHHHHHSCCCBCTTTCCBC-------CGGGEEEB
T ss_pred eecCCCccccccccCcCCcCCCcceECHHHHHHHhhcCCceeCCCCCccc-------CHHHeeEc
Confidence 599999999999999999999999998865 346899998765 23666663
No 134
>2ct1_A Transcriptional repressor CTCF; CCCTC-BINDING factor, zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1
Probab=84.13 E-value=0.39 Score=34.99 Aligned_cols=34 Identities=21% Similarity=0.376 Sum_probs=28.4
Q ss_pred eeecCCcEEEecCCchhhhhcChhHHHHhhhhhhcc
Q 011117 115 TIKLMEGIFICAAPHCLKSFLKKTEFEAHIHVSHAD 150 (493)
Q Consensus 115 ri~p~esIFIC~~~gCkRtYLSqRDLQAHInhrH~~ 150 (493)
+++..+..|.|.. |.|.|.+..+|+.|++..|..
T Consensus 8 ~~H~~~k~~~C~~--C~k~f~~~~~L~~H~~~~h~~ 41 (77)
T 2ct1_A 8 RTHSGEKPYECYI--CHARFTQSGTMKMHILQKHTE 41 (77)
T ss_dssp CCCSCCCSEECTT--TCCEESCHHHHHHHHHHHSSS
T ss_pred cccCCCCCeECCC--cCchhCCHHHHHHHHHHhcCC
Confidence 4566677899976 999999999999999877754
No 135
>2eod_A TNF receptor-associated factor 4; zinc binding, NF-KB, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=84.04 E-value=0.28 Score=35.09 Aligned_cols=26 Identities=12% Similarity=0.318 Sum_probs=21.9
Q ss_pred CCcEEEecCCchhhhhcChhHHHHhhh
Q 011117 119 MEGIFICAAPHCLKSFLKKTEFEAHIH 145 (493)
Q Consensus 119 ~esIFIC~~~gCkRtYLSqRDLQAHIn 145 (493)
.+..|.|.. .|.|+|....+|+.|+.
T Consensus 33 ~~~p~~C~~-~C~k~f~~~~~L~~H~~ 58 (66)
T 2eod_A 33 PRLPVACPN-QCGVGTVAREDLPGHLK 58 (66)
T ss_dssp SSSEEECTT-CCSCCEEETTTHHHHHH
T ss_pred CCcCccCCc-ccCcccccHHHHHHHHH
Confidence 467899863 69999999999999975
No 136
>1z60_A TFIIH basal transcription factor complex P44 subunit; basic transcription factor, zinc binding protein, ring finger; NMR {Homo sapiens} SCOP: g.49.1.2
Probab=83.44 E-value=0.57 Score=36.62 Aligned_cols=37 Identities=32% Similarity=0.653 Sum_probs=29.4
Q ss_pred cccCCCccccc--cccccccccccchhhhh----CCCCcccch
Q 011117 71 FCVRCDYPIAI--YGRLNPCEHVFCLDCAR----SDSMCYLCD 107 (493)
Q Consensus 71 FCdICdlPI~i--ygRmIPCKHVFCydCA~----sDktCP~Cn 107 (493)
.|-.|.++|.. .++--=|+++||.||=. .-..||.|.
T Consensus 17 ~C~~C~~~~~~~~~y~C~~C~~~FC~dCD~fiHe~Lh~CPgC~ 59 (59)
T 1z60_A 17 FCYGCQGELKDQHVYVCAVCQNVFCVDCDVFVHDSLHSCPGCI 59 (59)
T ss_dssp EETTTTEECTTSEEECCTTTTCCBCHHHHHTTTTTSCSSSTTC
T ss_pred cccccCcccCCCccEECCccCcCcccchhHHHHhhccCCcCCC
Confidence 48889988854 35677799999999987 447899983
No 137
>2jun_A Midline-1; B-BOX, TRIM, ring finger, alternative splicing, coiled coil, cytoplasm, cytoskeleton, disease mutation, ligase, metal-binding; NMR {Homo sapiens}
Probab=83.35 E-value=0.44 Score=37.82 Aligned_cols=29 Identities=24% Similarity=0.575 Sum_probs=22.3
Q ss_pred ccccCCCcc-ccccccc-cccccccchhhhh
Q 011117 70 HFCVRCDYP-IAIYGRL-NPCEHVFCLDCAR 98 (493)
Q Consensus 70 hFCdICdlP-I~iygRm-IPCKHVFCydCA~ 98 (493)
..|++|... ....+.. +.|.|.||..|+.
T Consensus 4 ~~C~~C~~~~~~~av~~C~~C~~~~C~~Cl~ 34 (101)
T 2jun_A 4 VLCQFCDQDPAQDAVKTCVTCEVSYCDECLK 34 (101)
T ss_dssp CBCTTCCSSSCCBCCEEETTTTEEECHHHHH
T ss_pred CCCcCCCCCCCCCceEECCcCChHHhHHHCH
Confidence 679999854 3444432 8899999999997
No 138
>2ebt_A Krueppel-like factor 5; C2H2-type zinc-finger, metal BIND, transcription factor, kruppel-like factor, GC-box promoter elements, structural genomics; NMR {Homo sapiens}
Probab=83.18 E-value=0.46 Score=35.49 Aligned_cols=30 Identities=20% Similarity=0.311 Sum_probs=15.7
Q ss_pred eecCCcEEEecCCchhhhhcChhHHHHhhh
Q 011117 116 IKLMEGIFICAAPHCLKSFLKKTEFEAHIH 145 (493)
Q Consensus 116 i~p~esIFIC~~~gCkRtYLSqRDLQAHIn 145 (493)
++..+..|.|....|.+.|.+..+|..|++
T Consensus 39 ~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~ 68 (100)
T 2ebt_A 39 THTGEKPYKCTWEGCDWRFARSDELTRHYR 68 (100)
T ss_dssp HHSCCCCEECCSSSCCCEESSHHHHHHHHH
T ss_pred HhCCCCCeeCCCCCCCCccCCHHHHHHHHH
Confidence 344444555555555555555555555553
No 139
>2elo_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=82.82 E-value=0.5 Score=29.48 Aligned_cols=29 Identities=24% Similarity=0.424 Sum_probs=24.0
Q ss_pred eecCCcEEEecCCchhhhhcChhHHHHhhhh
Q 011117 116 IKLMEGIFICAAPHCLKSFLKKTEFEAHIHV 146 (493)
Q Consensus 116 i~p~esIFIC~~~gCkRtYLSqRDLQAHInh 146 (493)
++..+.-|.|.. |.|.|....+|..|++.
T Consensus 3 ~h~~~k~~~C~~--C~k~f~~~~~l~~H~~~ 31 (37)
T 2elo_A 3 SGSSGRSYSCPV--CEKSFSEDRLIKSHIKT 31 (37)
T ss_dssp CCCCCCCCEETT--TTEECSSHHHHHHHHHH
T ss_pred CCCCCCCcCCCC--CCCccCCHHHHHHHHHH
Confidence 344567799875 99999999999999865
No 140
>2ctu_A Zinc finger protein 483; zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=82.36 E-value=0.11 Score=36.71 Aligned_cols=48 Identities=19% Similarity=0.381 Sum_probs=35.1
Q ss_pred cCcccccccCCCccccccccccccccccchhhhhCCCCcccchHhHhhheeeecCCcEEEecCCchhhhhcChhHHHHhh
Q 011117 65 LGERVHFCVRCDYPIAIYGRLNPCEHVFCLDCARSDSMCYLCDERIQKIQTIKLMEGIFICAAPHCLKSFLKKTEFEAHI 144 (493)
Q Consensus 65 lgEKvhFCdICdlPI~iygRmIPCKHVFCydCA~sDktCP~Cna~VqrIEri~p~esIFIC~~~gCkRtYLSqRDLQAHI 144 (493)
.+++.+.|++|++-|.....+.- +..|.|. .|.++|.+..+|..|+
T Consensus 14 ~~~~~~~C~~C~k~f~~~~~l~~--------------------------------~~~~~C~--~C~~~f~~~~~l~~H~ 59 (73)
T 2ctu_A 14 LGDRSQKCSKCGIIFIRRSTLSR--------------------------------RKTPMCE--KCRKDSCQEAALNKDE 59 (73)
T ss_dssp CCCSEEECSSSCCEEECCCCCCC--------------------------------SSSCCCH--HHHHTCSCCCSSCCCS
T ss_pred CCCCCeeCCcccchhCCHHHhCc--------------------------------CCCCCCC--CCChhhcCHHHHHHHH
Confidence 45677889999888776554442 3456764 4889999999999997
Q ss_pred hh
Q 011117 145 HV 146 (493)
Q Consensus 145 nh 146 (493)
+.
T Consensus 60 ~~ 61 (73)
T 2ctu_A 60 GN 61 (73)
T ss_dssp SC
T ss_pred Hh
Confidence 54
No 141
>3nw0_A Non-structural maintenance of chromosomes element homolog; E3 ligase, Zn, metal binding protein; 2.92A {Homo sapiens}
Probab=82.07 E-value=0.64 Score=43.77 Aligned_cols=46 Identities=17% Similarity=0.417 Sum_probs=34.1
Q ss_pred cCcccccccCCCccccccccccccccccchhhhh------CCCCcccchHhH
Q 011117 65 LGERVHFCVRCDYPIAIYGRLNPCEHVFCLDCAR------SDSMCYLCDERI 110 (493)
Q Consensus 65 lgEKvhFCdICdlPI~iygRmIPCKHVFCydCA~------sDktCP~Cna~V 110 (493)
..+.+.+|.+|...+..-.+-.-|.|.|=..|+. ...+||.|+..-
T Consensus 176 ~~~~i~~C~iC~~iv~~g~~C~~C~~~~H~~C~~~~~~~~~~~~CP~C~~~W 227 (238)
T 3nw0_A 176 YPDAVKICNICHSLLIQGQSCETCGIRMHLPCVAKYFQSNAEPRCPHCNDYW 227 (238)
T ss_dssp CTTTCCBCTTTCSBCSSCEECSSSCCEECHHHHHHHTTTCSSCBCTTTCCBC
T ss_pred cCCCCCcCcchhhHHhCCcccCccChHHHHHHHHHHHHhCCCCCCCCCCCCC
Confidence 3445789999987777544444499999889986 245899999864
No 142
>2elx_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus}
Probab=81.99 E-value=0.59 Score=28.56 Aligned_cols=26 Identities=31% Similarity=0.683 Sum_probs=22.0
Q ss_pred CCcEEEecCCchhhhhcChhHHHHhhhh
Q 011117 119 MEGIFICAAPHCLKSFLKKTEFEAHIHV 146 (493)
Q Consensus 119 ~esIFIC~~~gCkRtYLSqRDLQAHInh 146 (493)
.+.-|.|.. |.|.|.....|+.|++.
T Consensus 4 ~~k~~~C~~--C~k~f~~~~~L~~H~~~ 29 (35)
T 2elx_A 4 GSSGYVCAL--CLKKFVSSIRLRSHIRE 29 (35)
T ss_dssp CCCSEECSS--SCCEESSHHHHHHHHHH
T ss_pred CCCCeECCC--CcchhCCHHHHHHHHHH
Confidence 456789865 99999999999999864
No 143
>2dmd_A Zinc finger protein 64, isoforms 1 and 2; ZNF338, nuclear protein, DNA- binding, transcription, C2H2-type zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1
Probab=81.80 E-value=0.71 Score=34.34 Aligned_cols=46 Identities=11% Similarity=0.322 Sum_probs=32.2
Q ss_pred CCcccchHh------HhhheeeecCCcEEEecCCchhhhhcChhHHHHhhhhhh
Q 011117 101 SMCYLCDER------IQKIQTIKLMEGIFICAAPHCLKSFLKKTEFEAHIHVSH 148 (493)
Q Consensus 101 ktCP~Cna~------VqrIEri~p~esIFIC~~~gCkRtYLSqRDLQAHInhrH 148 (493)
..|..|... +..-.+++..+..|.|.. |.+.|.+..+|+.|++.-|
T Consensus 9 ~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~--C~~~f~~~~~l~~H~~~h~ 60 (96)
T 2dmd_A 9 HKCEVCGKCFSRKDKLKTHMRCHTGVKPYKCKT--CDYAAADSSSLNKHLRIHS 60 (96)
T ss_dssp CCBTTTTBCCCCHHHHHHHGGGCCCCCSEECSS--SCCEESSHHHHHHHHHHSC
T ss_pred eECCCCCCccCCHHHHHHHHHhcCCCCCEeCCC--CCCccCCHHHHHHHHHHhC
Confidence 456666533 333344555667899864 9999999999999987533
No 144
>1srk_A Zinc finger protein ZFPM1; classical zinc finger, transcription; NMR {Mus musculus} SCOP: g.37.1.1
Probab=81.43 E-value=0.8 Score=28.17 Aligned_cols=26 Identities=31% Similarity=0.678 Sum_probs=22.1
Q ss_pred CCcEEEecCCchhhhhcChhHHHHhhhh
Q 011117 119 MEGIFICAAPHCLKSFLKKTEFEAHIHV 146 (493)
Q Consensus 119 ~esIFIC~~~gCkRtYLSqRDLQAHInh 146 (493)
.+..|.|.. |.|.|.....|..|++.
T Consensus 4 ~~k~~~C~~--C~k~f~~~~~l~~H~~~ 29 (35)
T 1srk_A 4 GKRPFVCRI--CLSAFTTKANCARHLKV 29 (35)
T ss_dssp CCSCEECSS--SCCEESSHHHHHHHHGG
T ss_pred CCcCeeCCC--CCcccCCHHHHHHHHHH
Confidence 456799875 99999999999999764
No 145
>2yt9_A Zinc finger-containing protein 1; C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1
Probab=81.19 E-value=0.48 Score=35.22 Aligned_cols=48 Identities=17% Similarity=0.394 Sum_probs=33.6
Q ss_pred CCcccchHhH------hhheeeecCCcEEEecCCchhhhhcChhHHHHhhhhhhcc
Q 011117 101 SMCYLCDERI------QKIQTIKLMEGIFICAAPHCLKSFLKKTEFEAHIHVSHAD 150 (493)
Q Consensus 101 ktCP~Cna~V------qrIEri~p~esIFIC~~~gCkRtYLSqRDLQAHInhrH~~ 150 (493)
..|..|.... ..-.+++..+..|.|.. |.+.|.+..+|+.|++..|..
T Consensus 8 ~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~--C~~~f~~~~~l~~H~~~h~~~ 61 (95)
T 2yt9_A 8 VACEICGKIFRDVYHLNRHKLSHSGEKPYSCPV--CGLRFKRKDRMSYHVRSHDGS 61 (95)
T ss_dssp EECSSSCCEESSSHHHHHHHHHSCSSCSEECSS--SCCEESCHHHHHHHHHHHCCC
T ss_pred eECCCCCCccCChHHHHHHHHhcCCCCCCcCCC--CCCccCCHHHHHHHHHHhcCC
Confidence 3466665432 33334555677899876 999999999999999765543
No 146
>2wbs_A Krueppel-like factor 4; transcription-DNA complex, DNA-binding, transcription, metal-binding, DNA, protein, nucleus, activator; 1.70A {Mus musculus} PDB: 2wbu_A
Probab=80.86 E-value=0.6 Score=34.15 Aligned_cols=33 Identities=18% Similarity=0.235 Sum_probs=24.2
Q ss_pred eeeecCCcEEEecCCchhhhhcChhHHHHhhhh
Q 011117 114 QTIKLMEGIFICAAPHCLKSFLKKTEFEAHIHV 146 (493)
Q Consensus 114 Eri~p~esIFIC~~~gCkRtYLSqRDLQAHInh 146 (493)
.+++..+..|.|....|.+.|.+..+|..|++.
T Consensus 27 ~~~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~ 59 (89)
T 2wbs_A 27 LRTHTGEKPYHCDWDGCGWKFARSDELTRHYRK 59 (89)
T ss_dssp HTTSCSSCCEECCSTTTCCEESSHHHHHHHHHH
T ss_pred HHhcCCCCCcCCCCCCCCCccCCHHHHHHHHHH
Confidence 344556677888777788888888888888753
No 147
>2epx_A Zinc finger protein 28 homolog; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=80.69 E-value=0.42 Score=31.38 Aligned_cols=33 Identities=21% Similarity=0.368 Sum_probs=26.2
Q ss_pred eecCCcEEEecCCchhhhhcChhHHHHhhhhhhcc
Q 011117 116 IKLMEGIFICAAPHCLKSFLKKTEFEAHIHVSHAD 150 (493)
Q Consensus 116 i~p~esIFIC~~~gCkRtYLSqRDLQAHInhrH~~ 150 (493)
++..+..|.|.. |.|+|....+|+.|++..|..
T Consensus 6 ~H~~~k~~~C~~--C~k~F~~~~~L~~H~~~~H~~ 38 (47)
T 2epx_A 6 SGTGKKPYECIE--CGKAFIQNTSLIRHWRYYHTG 38 (47)
T ss_dssp CCCCCCSBCCSS--SCCCBSSHHHHHHHHTTTTTT
T ss_pred ccCCCCCEECCc--cCchhCChHHHHHHhHhhcCC
Confidence 455567799865 999999999999998755643
No 148
>2en6_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=80.22 E-value=0.81 Score=30.07 Aligned_cols=32 Identities=28% Similarity=0.426 Sum_probs=26.3
Q ss_pred eeecCCcEEEecCCchhhhhcChhHHHHhhhhhhc
Q 011117 115 TIKLMEGIFICAAPHCLKSFLKKTEFEAHIHVSHA 149 (493)
Q Consensus 115 ri~p~esIFIC~~~gCkRtYLSqRDLQAHInhrH~ 149 (493)
+++..+..|.|.. |.|+|.+..+|..|++. |.
T Consensus 5 ~~H~~~~~~~C~~--C~k~f~~~~~L~~H~~~-H~ 36 (46)
T 2en6_A 5 SSGSGEKPYGCNE--CGKTFSQKSILSAHQRT-HT 36 (46)
T ss_dssp CCCCSSCCEEETT--TTEEESSHHHHHHHHHH-HS
T ss_pred CccCCCcCeECCC--CCcccCchHHHHHHHHH-cC
Confidence 3566678899976 99999999999999865 53
No 149
>2emi_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=80.16 E-value=0.71 Score=30.35 Aligned_cols=32 Identities=25% Similarity=0.534 Sum_probs=25.8
Q ss_pred eeecCCcEEEecCCchhhhhcChhHHHHhhhhhhc
Q 011117 115 TIKLMEGIFICAAPHCLKSFLKKTEFEAHIHVSHA 149 (493)
Q Consensus 115 ri~p~esIFIC~~~gCkRtYLSqRDLQAHInhrH~ 149 (493)
+++..+..|.|.. |.|.|.+..+|+.|++. |.
T Consensus 5 ~~H~~~~~~~C~~--C~k~F~~~~~L~~H~~~-H~ 36 (46)
T 2emi_A 5 SSGTGERHYECSE--CGKAFIQKSTLSMHQRI-HR 36 (46)
T ss_dssp CSCSSCCCEECSS--SCCEESSHHHHHHHHGG-GC
T ss_pred cccCCCCCCCCCC--CCcccCCHHHHHHHHhH-hC
Confidence 3455677899875 99999999999999764 53
No 150
>2epu_A Zinc finger protein 32; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=79.99 E-value=0.77 Score=30.14 Aligned_cols=29 Identities=28% Similarity=0.395 Sum_probs=24.3
Q ss_pred eecCCcEEEecCCchhhhhcChhHHHHhhhh
Q 011117 116 IKLMEGIFICAAPHCLKSFLKKTEFEAHIHV 146 (493)
Q Consensus 116 i~p~esIFIC~~~gCkRtYLSqRDLQAHInh 146 (493)
++..+..|.|.. |.|.|.+..+|+.|++.
T Consensus 6 ~h~~~k~~~C~~--C~k~F~~~~~L~~H~~~ 34 (45)
T 2epu_A 6 SGTGQKPFECTH--CGKSFRAKGNLVTHQRI 34 (45)
T ss_dssp CCCSCCSEEETT--TTEEESSHHHHHHHHTT
T ss_pred CCCCCcCccCCC--CCCccCChHHHHHHHHH
Confidence 455677899976 99999999999999764
No 151
>1a1h_A QGSR zinc finger peptide; complex (zinc finger/DNA), DNA-binding protein, transcription/DNA complex; HET: DNA; 1.60A {Mus musculus} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1jk2_A 1jk1_A 1a1g_A* 1a1f_A* 1a1i_A* 1a1j_A* 1a1k_A* 1aay_A* 1a1l_A* 1p47_A 1zaa_C* 1g2f_C 1g2d_C
Probab=79.76 E-value=0.67 Score=33.96 Aligned_cols=29 Identities=24% Similarity=0.599 Sum_probs=18.6
Q ss_pred eecCCcEEEecCCchhhhhcChhHHHHhhhh
Q 011117 116 IKLMEGIFICAAPHCLKSFLKKTEFEAHIHV 146 (493)
Q Consensus 116 i~p~esIFIC~~~gCkRtYLSqRDLQAHInh 146 (493)
++..+..|.|.. |.++|.+..+|+.|++.
T Consensus 28 ~h~~~~~~~C~~--C~~~f~~~~~l~~H~~~ 56 (90)
T 1a1h_A 28 IHTGQKPFQCRI--CMRNFSRSDHLTTHIRT 56 (90)
T ss_dssp HHHCCCCEECTT--TCCEESCHHHHHHHHHH
T ss_pred HhCCCCCccCCC--CCcccCCHHHHHHHHHH
Confidence 444556677654 77777777777777653
No 152
>2epc_A Zinc finger protein 32; zinc finger domain, C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} PDB: 2yta_A
Probab=79.32 E-value=0.76 Score=29.39 Aligned_cols=29 Identities=24% Similarity=0.430 Sum_probs=24.2
Q ss_pred eecCCcEEEecCCchhhhhcChhHHHHhhhh
Q 011117 116 IKLMEGIFICAAPHCLKSFLKKTEFEAHIHV 146 (493)
Q Consensus 116 i~p~esIFIC~~~gCkRtYLSqRDLQAHInh 146 (493)
++..+.-|.|.. |.|+|.+..+|+.|++.
T Consensus 5 ~H~~~~~~~C~~--C~k~f~~~~~l~~H~~~ 33 (42)
T 2epc_A 5 SSGGETPYLCGQ--CGKSFTQRGSLAVHQRS 33 (42)
T ss_dssp CCCSSCCEECSS--SCCEESSHHHHHHHHHH
T ss_pred cCCCCCCeECCC--CCcccCCHHHHHHHhhh
Confidence 455667899876 99999999999999764
No 153
>2m0d_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc fingers, transcription; NMR {Homo sapiens}
Probab=79.07 E-value=0.85 Score=26.39 Aligned_cols=24 Identities=25% Similarity=0.436 Sum_probs=20.2
Q ss_pred cEEEecCCchhhhhcChhHHHHhhhh
Q 011117 121 GIFICAAPHCLKSFLKKTEFEAHIHV 146 (493)
Q Consensus 121 sIFIC~~~gCkRtYLSqRDLQAHInh 146 (493)
..|.|.. |.++|.+...|..|++.
T Consensus 2 k~~~C~~--C~~~f~~~~~l~~H~~~ 25 (30)
T 2m0d_A 2 KPYQCDY--CGRSFSDPTSKMRHLET 25 (30)
T ss_dssp CCEECTT--TCCEESCHHHHHHHHHT
T ss_pred cCccCCC--CCcccCCHHHHHHHHHH
Confidence 3578765 99999999999999864
No 154
>2fiy_A Protein FDHE homolog; FDHE protein, structural genomics, P protein structure initiative, midwest center for structural genomics, MCSG; 2.10A {Pseudomonas aeruginosa} SCOP: e.59.1.1
Probab=78.96 E-value=0.7 Score=45.43 Aligned_cols=59 Identities=24% Similarity=0.415 Sum_probs=40.4
Q ss_pred cccccccCCC-ccccccccc----cccccccchhhhh----CCCCcccchHhHhhheeeecCC----------cEEEec
Q 011117 67 ERVHFCVRCD-YPIAIYGRL----NPCEHVFCLDCAR----SDSMCYLCDERIQKIQTIKLME----------GIFICA 126 (493)
Q Consensus 67 EKvhFCdICd-lPI~iygRm----IPCKHVFCydCA~----sDktCP~Cna~VqrIEri~p~e----------sIFIC~ 126 (493)
....+|++|+ .|....++. -==++.+|.-|.. .-.+|+.|.+. .+++-+...+ .|..|.
T Consensus 180 ~~~~~CPvCGs~P~~s~l~~~g~~~G~R~l~Cs~C~t~W~~~R~~C~~Cg~~-~~l~y~~~e~~~~~~~~~~~r~e~C~ 257 (309)
T 2fiy_A 180 ESRTLCPACGSPPMAGMIRQGGKETGLRYLSCSLCACEWHYVRIKCSHCEES-KHLAYLSLEHDGQPAEKAVLRAETCP 257 (309)
T ss_dssp TTCSSCTTTCCCEEEEEEEC----CCEEEEEETTTCCEEECCTTSCSSSCCC-SCCEEECCCC-CCCSTTCSEEEEEET
T ss_pred ccCCCCCCCCCcCceeEEeecCCCCCcEEEEeCCCCCEEeecCcCCcCCCCC-CCeeEEEecCccccCCCcceEEEEcc
Confidence 4578999999 555443331 1123679999998 44789999998 6777654433 277876
No 155
>2em3_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=78.61 E-value=0.81 Score=30.07 Aligned_cols=31 Identities=26% Similarity=0.474 Sum_probs=25.6
Q ss_pred eecCCcEEEecCCchhhhhcChhHHHHhhhhhhc
Q 011117 116 IKLMEGIFICAAPHCLKSFLKKTEFEAHIHVSHA 149 (493)
Q Consensus 116 i~p~esIFIC~~~gCkRtYLSqRDLQAHInhrH~ 149 (493)
++..+..|.|.. |.|.|.+..+|..|++. |.
T Consensus 6 ~H~~~~~~~C~~--C~k~F~~~~~L~~H~~~-H~ 36 (46)
T 2em3_A 6 SGTGEKPYECKV--CSKAFTQKAHLAQHQKT-HT 36 (46)
T ss_dssp CCSSCCSEECSS--SCCEESSHHHHHHHHHH-HC
T ss_pred CCCCCcCeECCC--CCcccCCHHHHHHHHHH-hC
Confidence 455677899876 99999999999999864 54
No 156
>2eox_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=78.49 E-value=0.77 Score=29.88 Aligned_cols=30 Identities=17% Similarity=0.336 Sum_probs=25.1
Q ss_pred eeecCCcEEEecCCchhhhhcChhHHHHhhhh
Q 011117 115 TIKLMEGIFICAAPHCLKSFLKKTEFEAHIHV 146 (493)
Q Consensus 115 ri~p~esIFIC~~~gCkRtYLSqRDLQAHInh 146 (493)
+++..+..|.|.. |.|+|.+..+|..|++.
T Consensus 5 ~~H~~~~~~~C~~--C~k~F~~~~~L~~H~~~ 34 (44)
T 2eox_A 5 SSGTDSKSYNCNE--CGKAFTRIFHLTRHQKI 34 (44)
T ss_dssp CCCCCCCCEEETT--TTEEESSSHHHHTTHHH
T ss_pred cCCCCCCCeECcc--cCcccCCHHHHHHHHHH
Confidence 3455677899986 99999999999999864
No 157
>2elq_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=78.02 E-value=0.85 Score=28.33 Aligned_cols=28 Identities=21% Similarity=0.353 Sum_probs=23.0
Q ss_pred ecCCcEEEecCCchhhhhcChhHHHHhhhh
Q 011117 117 KLMEGIFICAAPHCLKSFLKKTEFEAHIHV 146 (493)
Q Consensus 117 ~p~esIFIC~~~gCkRtYLSqRDLQAHInh 146 (493)
+..+..|.|.. |.+.|.+...|+.|++.
T Consensus 4 h~~~k~~~C~~--C~k~f~~~~~l~~H~~~ 31 (36)
T 2elq_A 4 GSSGKPFKCSL--CEYATRSKSNLKAHMNR 31 (36)
T ss_dssp SCCCCSEECSS--SSCEESCHHHHHHHHHH
T ss_pred CCCCCCccCCC--CCchhCCHHHHHHHHHH
Confidence 34566799875 99999999999999754
No 158
>2eow_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=77.90 E-value=0.89 Score=29.74 Aligned_cols=31 Identities=23% Similarity=0.412 Sum_probs=25.4
Q ss_pred eecCCcEEEecCCchhhhhcChhHHHHhhhhhhc
Q 011117 116 IKLMEGIFICAAPHCLKSFLKKTEFEAHIHVSHA 149 (493)
Q Consensus 116 i~p~esIFIC~~~gCkRtYLSqRDLQAHInhrH~ 149 (493)
++..+..|.|.. |.|.|....+|..|++. |.
T Consensus 6 ~H~~~k~~~C~~--C~k~f~~~~~L~~H~~~-H~ 36 (46)
T 2eow_A 6 SGTGEKPYKCNE--CGKAFRARSSLAIHQAT-HS 36 (46)
T ss_dssp CSCCCCCEECTT--SCCEESSHHHHHHHHHH-HC
T ss_pred CCCCCCCeeccc--cCChhcCHHHHHHHHHH-cC
Confidence 455677899875 99999999999999864 54
No 159
>2elp_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=77.78 E-value=0.91 Score=28.36 Aligned_cols=29 Identities=21% Similarity=0.378 Sum_probs=23.4
Q ss_pred eecCCcEEEecCCchhhhhcCh-hHHHHhhhh
Q 011117 116 IKLMEGIFICAAPHCLKSFLKK-TEFEAHIHV 146 (493)
Q Consensus 116 i~p~esIFIC~~~gCkRtYLSq-RDLQAHInh 146 (493)
++..+..|.|. .|.|.|... .+|..|+..
T Consensus 3 ~h~~~k~~~C~--~C~k~f~~~~~~L~~H~~~ 32 (37)
T 2elp_A 3 SGSSGRAMKCP--YCDFYFMKNGSDLQRHIWA 32 (37)
T ss_dssp SCCCCCCEECS--SSSCEECSSCHHHHHHHHH
T ss_pred CCCCCCCeECC--CCChhhccCHHHHHHHHHh
Confidence 34456789985 599999999 999999753
No 160
>2yts_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=77.65 E-value=0.91 Score=29.70 Aligned_cols=31 Identities=32% Similarity=0.567 Sum_probs=25.2
Q ss_pred eecCCcEEEecCCchhhhhcChhHHHHhhhhhhc
Q 011117 116 IKLMEGIFICAAPHCLKSFLKKTEFEAHIHVSHA 149 (493)
Q Consensus 116 i~p~esIFIC~~~gCkRtYLSqRDLQAHInhrH~ 149 (493)
++..+..|.|.. |.|.|.+..+|..|++ .|.
T Consensus 6 ~H~~~k~~~C~~--C~k~f~~~~~L~~H~~-~H~ 36 (46)
T 2yts_A 6 SGTGEKPYICNE--CGKSFIQKSHLNRHRR-IHT 36 (46)
T ss_dssp CCCSCCSEECSS--SCCEESSHHHHHHHGG-GTS
T ss_pred CCCCCcCEECCC--CChhhCChHHHHHHHH-hcC
Confidence 455677899865 9999999999999975 353
No 161
>2eml_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=77.56 E-value=0.97 Score=29.67 Aligned_cols=30 Identities=20% Similarity=0.431 Sum_probs=25.0
Q ss_pred eeecCCcEEEecCCchhhhhcChhHHHHhhhh
Q 011117 115 TIKLMEGIFICAAPHCLKSFLKKTEFEAHIHV 146 (493)
Q Consensus 115 ri~p~esIFIC~~~gCkRtYLSqRDLQAHInh 146 (493)
+++..+..|.|.. |.|+|.+..+|+.|++.
T Consensus 5 ~~H~~~k~~~C~~--C~k~f~~~~~L~~H~~~ 34 (46)
T 2eml_A 5 SSGTGEKPYECSV--CGKAFSHRQSLSVHQRI 34 (46)
T ss_dssp CCCSSCCSEECSS--SCCEESSHHHHHHHHGG
T ss_pred CCcCCCCCeeCCC--cCCccCCHHHHHHHHHH
Confidence 3455677899876 99999999999999864
No 162
>2en3_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=77.56 E-value=0.83 Score=30.02 Aligned_cols=29 Identities=21% Similarity=0.258 Sum_probs=24.4
Q ss_pred eecCCcEEEecCCchhhhhcChhHHHHhhhh
Q 011117 116 IKLMEGIFICAAPHCLKSFLKKTEFEAHIHV 146 (493)
Q Consensus 116 i~p~esIFIC~~~gCkRtYLSqRDLQAHInh 146 (493)
++..+..|.|.. |.|+|....+|..|++.
T Consensus 6 ~H~~~k~~~C~~--C~k~F~~~~~L~~H~~~ 34 (46)
T 2en3_A 6 SGTGEKPFQCKE--CGMNFSWSCSLFKHLRS 34 (46)
T ss_dssp CSCCCCSEECSS--SCCEESSSHHHHHHHHH
T ss_pred ccCCCCCeeCcc--cChhhCCHHHHHHHHHH
Confidence 455677899876 99999999999999854
No 163
>2eoz_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=77.51 E-value=1.1 Score=29.58 Aligned_cols=29 Identities=24% Similarity=0.478 Sum_probs=24.6
Q ss_pred eecCCcEEEecCCchhhhhcChhHHHHhhhh
Q 011117 116 IKLMEGIFICAAPHCLKSFLKKTEFEAHIHV 146 (493)
Q Consensus 116 i~p~esIFIC~~~gCkRtYLSqRDLQAHInh 146 (493)
++..+..|.|.. |.|.|....+|..|++.
T Consensus 6 ~H~~~k~~~C~~--C~k~f~~~~~L~~H~~~ 34 (46)
T 2eoz_A 6 SGTGEKPYSCNV--CGKAFVLSAHLNQHLRV 34 (46)
T ss_dssp CCSSCCSEEETT--TTEEESSHHHHHHHHHH
T ss_pred cCCCCCCeECcc--cChhhCCHHHHHHHHHH
Confidence 455677899976 99999999999999765
No 164
>1x6h_A Transcriptional repressor CTCF; zinc finger protein, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1
Probab=77.28 E-value=0.86 Score=33.08 Aligned_cols=34 Identities=24% Similarity=0.419 Sum_probs=27.9
Q ss_pred eeecCCcEEEecCCchhhhhcChhHHHHhhhhhhcc
Q 011117 115 TIKLMEGIFICAAPHCLKSFLKKTEFEAHIHVSHAD 150 (493)
Q Consensus 115 ri~p~esIFIC~~~gCkRtYLSqRDLQAHInhrH~~ 150 (493)
+++..+..|.|.. |.+.|.+..+|..|++..|..
T Consensus 8 ~~H~~~k~~~C~~--C~~~f~~~~~l~~H~~~~~~~ 41 (86)
T 1x6h_A 8 RTHTGEKPYACSH--CDKTFRQKQLLDMHFKRYHDP 41 (86)
T ss_dssp TTCCCCCCEECSS--SSCEESSHHHHHHHHHHTTCS
T ss_pred ceecCCCCCcCCC--CCCccCCHHHHHHHHHHhcCC
Confidence 3555677899976 999999999999999766653
No 165
>2en2_A B-cell lymphoma 6 protein; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=77.22 E-value=0.92 Score=29.12 Aligned_cols=31 Identities=23% Similarity=0.403 Sum_probs=25.0
Q ss_pred eecCCcEEEecCCchhhhhcChhHHHHhhhhhhc
Q 011117 116 IKLMEGIFICAAPHCLKSFLKKTEFEAHIHVSHA 149 (493)
Q Consensus 116 i~p~esIFIC~~~gCkRtYLSqRDLQAHInhrH~ 149 (493)
++..+..|.|. .|.|+|....+|..|++ .|.
T Consensus 5 ~H~~~k~~~C~--~C~k~f~~~~~L~~H~~-~H~ 35 (42)
T 2en2_A 5 SSGGEKPYKCE--TCGARFVQVAHLRAHVL-IHT 35 (42)
T ss_dssp CCCSSCSEECT--TTCCEESSHHHHHHHTH-HHH
T ss_pred ccCCCCCEeCC--CcChhhCCHHHHHHHHH-HcC
Confidence 45567789986 59999999999999986 343
No 166
>2ee8_A Protein ODD-skipped-related 2; zinc binding, ZF-C2H2 domain, structural genomics, NPPSFA; NMR {Mus musculus} SCOP: k.12.1.1
Probab=77.09 E-value=0.51 Score=35.87 Aligned_cols=46 Identities=17% Similarity=0.452 Sum_probs=30.9
Q ss_pred CCcccchHh------HhhheeeecCCcEEEecCCchhhhhcChhHHHHhhhhhh
Q 011117 101 SMCYLCDER------IQKIQTIKLMEGIFICAAPHCLKSFLKKTEFEAHIHVSH 148 (493)
Q Consensus 101 ktCP~Cna~------VqrIEri~p~esIFIC~~~gCkRtYLSqRDLQAHInhrH 148 (493)
..|..|... +..-.+++..+..|.|.. |.+.|.+..+|+.|++.-+
T Consensus 18 ~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~--C~~~f~~~~~l~~H~~~h~ 69 (106)
T 2ee8_A 18 FICKFCGRHFTKSYNLLIHERTHTDERPYTCDI--CHKAFRRQDHLRDHRYIHS 69 (106)
T ss_dssp CBCSSSCCBCSSHHHHHHHHHHHCCSCCCBCSS--SCCBCSCHHHHHHHGGGSC
T ss_pred eECCCCCCccCCHHHHHHHHHHcCCCCCcCCCC--ccchhCCHHHHHHHHHHhC
Confidence 456666543 233334455567788875 9999999999999976533
No 167
>2eoo_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=77.06 E-value=1 Score=29.63 Aligned_cols=31 Identities=23% Similarity=0.353 Sum_probs=25.5
Q ss_pred eecCCcEEEecCCchhhhhcChhHHHHhhhhhhc
Q 011117 116 IKLMEGIFICAAPHCLKSFLKKTEFEAHIHVSHA 149 (493)
Q Consensus 116 i~p~esIFIC~~~gCkRtYLSqRDLQAHInhrH~ 149 (493)
++..+..|.|.. |.|+|.+..+|..|++. |.
T Consensus 6 ~H~~~k~~~C~~--C~k~F~~~~~L~~H~~~-H~ 36 (46)
T 2eoo_A 6 SGSGERPYGCNE--CGKNFGRHSHLIEHLKR-HF 36 (46)
T ss_dssp CCSCCCCEECSS--SCCEESSHHHHHHHHHH-HH
T ss_pred CCCCCCCEEccc--cCcccCCHHHHHHHHHH-Hc
Confidence 455677899876 99999999999999865 53
No 168
>2em8_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=77.04 E-value=0.96 Score=29.82 Aligned_cols=32 Identities=22% Similarity=0.471 Sum_probs=25.8
Q ss_pred eeecCCcEEEecCCchhhhhcChhHHHHhhhhhhc
Q 011117 115 TIKLMEGIFICAAPHCLKSFLKKTEFEAHIHVSHA 149 (493)
Q Consensus 115 ri~p~esIFIC~~~gCkRtYLSqRDLQAHInhrH~ 149 (493)
+++..+..|.|.. |.|.|.+..+|+.|++. |.
T Consensus 5 ~~h~~~k~~~C~~--C~k~f~~~~~L~~H~~~-H~ 36 (46)
T 2em8_A 5 SSGSGEKPYKCVE--CGKGYKRRLDLDFHQRV-HT 36 (46)
T ss_dssp CCCCSCCSEECSS--SCCEESSHHHHHHHHHH-HH
T ss_pred CCCCCCCCeECcc--cCchhCCHHHHHHHHHH-Hc
Confidence 3455677899865 99999999999999864 54
No 169
>2eof_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=77.01 E-value=0.95 Score=29.22 Aligned_cols=29 Identities=24% Similarity=0.398 Sum_probs=24.3
Q ss_pred eecCCcEEEecCCchhhhhcChhHHHHhhhh
Q 011117 116 IKLMEGIFICAAPHCLKSFLKKTEFEAHIHV 146 (493)
Q Consensus 116 i~p~esIFIC~~~gCkRtYLSqRDLQAHInh 146 (493)
++..+..|.|.. |.|+|.+..+|..|+..
T Consensus 6 ~H~~~k~~~C~~--C~k~f~~~~~L~~H~~~ 34 (44)
T 2eof_A 6 SGTGEKPYECNE--CQKAFNTKSNLMVHQRT 34 (44)
T ss_dssp CCSCCCSEECTT--TCCEESCHHHHHHHHHH
T ss_pred CCCCCCCeECCC--CCcccCCHhHHHHHHHH
Confidence 455677899875 99999999999999864
No 170
>4fo9_A E3 SUMO-protein ligase PIAS2; E3 ligase, pinit domain, SP-ring domain, structural GE consortium, SGC; 2.39A {Homo sapiens} PDB: 2asq_B
Probab=76.93 E-value=0.71 Score=46.73 Aligned_cols=50 Identities=24% Similarity=0.525 Sum_probs=41.6
Q ss_pred cccccCCCccccccccccccccccchhhhh--------CCCCcccchHhHhhheeeecCCcEEEe
Q 011117 69 VHFCVRCDYPIAIYGRLNPCEHVFCLDCAR--------SDSMCYLCDERIQKIQTIKLMEGIFIC 125 (493)
Q Consensus 69 vhFCdICdlPI~iygRmIPCKHVFCydCA~--------sDktCP~Cna~VqrIEri~p~esIFIC 125 (493)
.+.|++-...|.+++|-.-|+|.-|.|-.. ..-.||.|+..+ . .++|+|.
T Consensus 215 SL~CPlS~~ri~~P~Rg~~C~HlqCFDl~sfL~~~~~~~~W~CPiC~k~~------~-~~dL~ID 272 (360)
T 4fo9_A 215 SLMCPLGKMRLTIPCRAVTCTHLQCFDAALYLQMNEKKPTWICPVCDKKA------A-YESLILD 272 (360)
T ss_dssp ESBCTTTCSBCSSEEEETTCCCCCCEEHHHHHHHHHHSCCCBCTTTCSBC------C-GGGEEEB
T ss_pred eeeCCCccceeccCCcCCCCCCCccCCHHHHHHHHhhCCCeECCCCCccc------C-HHHeEEc
Confidence 588999999999999999999999998876 346899999876 2 3666763
No 171
>2epv_A Zinc finger protein 268; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=76.89 E-value=1 Score=29.49 Aligned_cols=32 Identities=28% Similarity=0.395 Sum_probs=25.6
Q ss_pred eeecCCcEEEecCCchhhhhcChhHHHHhhhhhhc
Q 011117 115 TIKLMEGIFICAAPHCLKSFLKKTEFEAHIHVSHA 149 (493)
Q Consensus 115 ri~p~esIFIC~~~gCkRtYLSqRDLQAHInhrH~ 149 (493)
+++..+..|.|.. |.|.|....+|..|+.. |.
T Consensus 5 ~~H~~~k~~~C~~--C~k~F~~~~~L~~H~~~-H~ 36 (44)
T 2epv_A 5 SSGSGEKPYECNE--CGKAFIWKSLLIVHERT-HA 36 (44)
T ss_dssp CCCCCCCSEECSS--SCCEESSHHHHHHHHGG-GS
T ss_pred cccCCCcCeECCC--CCcccCchHHHHHHHhH-hc
Confidence 3455677899875 99999999999999764 43
No 172
>2emx_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=76.85 E-value=1.1 Score=29.19 Aligned_cols=31 Identities=32% Similarity=0.415 Sum_probs=25.2
Q ss_pred eecCCcEEEecCCchhhhhcChhHHHHhhhhhhc
Q 011117 116 IKLMEGIFICAAPHCLKSFLKKTEFEAHIHVSHA 149 (493)
Q Consensus 116 i~p~esIFIC~~~gCkRtYLSqRDLQAHInhrH~ 149 (493)
++..+..|.|.. |.|+|.+..+|..|++. |.
T Consensus 4 ~H~~~k~~~C~~--C~k~f~~~~~L~~H~~~-H~ 34 (44)
T 2emx_A 4 GSSGEKPFGCSC--CEKAFSSKSYLLVHQQT-HA 34 (44)
T ss_dssp CCSSCCCEECSS--SSCEESSHHHHHHHHHH-HT
T ss_pred CcCCCcCccCCC--CCcccCCHHHHHHHHHH-hC
Confidence 455677899875 99999999999999864 54
No 173
>2ept_A Zinc finger protein 32; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=76.83 E-value=1.1 Score=28.77 Aligned_cols=29 Identities=24% Similarity=0.423 Sum_probs=23.8
Q ss_pred eecCCcEEEecCCchhhhhcChhHHHHhhhh
Q 011117 116 IKLMEGIFICAAPHCLKSFLKKTEFEAHIHV 146 (493)
Q Consensus 116 i~p~esIFIC~~~gCkRtYLSqRDLQAHInh 146 (493)
++..+..|.|. .|.|.|.+..+|..|++.
T Consensus 4 ~h~~~k~~~C~--~C~k~f~~~~~L~~H~~~ 32 (41)
T 2ept_A 4 GSSGQRVYECQ--ECGKSFRQKGSLTLHERI 32 (41)
T ss_dssp SCCCCCCEECS--SSCCEESSHHHHHHHGGG
T ss_pred ccCCCCCeECC--CCCCCcCCHHHHHHHHHH
Confidence 34556789986 499999999999999764
No 174
>2elt_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=76.77 E-value=1 Score=27.72 Aligned_cols=28 Identities=14% Similarity=0.278 Sum_probs=23.0
Q ss_pred ecCCcEEEecCCchhhhhcChhHHHHhhhh
Q 011117 117 KLMEGIFICAAPHCLKSFLKKTEFEAHIHV 146 (493)
Q Consensus 117 ~p~esIFIC~~~gCkRtYLSqRDLQAHInh 146 (493)
+..+..|.|.. |.|.|.....|..|+..
T Consensus 4 h~~~k~~~C~~--C~k~f~~~~~l~~H~~~ 31 (36)
T 2elt_A 4 GSSGKPYKCPQ--CSYASAIKANLNVHLRK 31 (36)
T ss_dssp SCCCCSEECSS--SSCEESSHHHHHHHHHH
T ss_pred CCCCCCCCCCC--CCcccCCHHHHHHHHHH
Confidence 34566799875 99999999999999753
No 175
>2emh_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=76.68 E-value=0.99 Score=29.62 Aligned_cols=31 Identities=26% Similarity=0.482 Sum_probs=25.4
Q ss_pred eecCCcEEEecCCchhhhhcChhHHHHhhhhhhc
Q 011117 116 IKLMEGIFICAAPHCLKSFLKKTEFEAHIHVSHA 149 (493)
Q Consensus 116 i~p~esIFIC~~~gCkRtYLSqRDLQAHInhrH~ 149 (493)
++..+..|.|.. |.|+|.+..+|..|++ .|.
T Consensus 6 ~H~~~k~~~C~~--C~k~F~~~~~L~~H~~-~H~ 36 (46)
T 2emh_A 6 SGTGERPYICTV--CGKAFTDRSNLIKHQK-IHT 36 (46)
T ss_dssp SCSCCCSEECTT--TCCEESSHHHHHHHHH-HHH
T ss_pred CCCCCCCcCCCC--CCchhCCHHHHHHHHH-hcC
Confidence 455677899876 9999999999999986 454
No 176
>2em4_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=76.53 E-value=0.97 Score=29.78 Aligned_cols=32 Identities=22% Similarity=0.375 Sum_probs=25.4
Q ss_pred eeecCCcEEEecCCchhhhhcChhHHHHhhhhhhc
Q 011117 115 TIKLMEGIFICAAPHCLKSFLKKTEFEAHIHVSHA 149 (493)
Q Consensus 115 ri~p~esIFIC~~~gCkRtYLSqRDLQAHInhrH~ 149 (493)
+++..+..|.|.. |.|.|....+|+.|++. |.
T Consensus 5 ~~H~~~k~~~C~~--C~k~f~~~~~L~~H~~~-H~ 36 (46)
T 2em4_A 5 SSGTGQRPYECIE--CGKAFKTKSSLICHRRS-HT 36 (46)
T ss_dssp CCCCCSSSEECSS--SCCEESSHHHHHHHHHH-HS
T ss_pred cccCCCcCcCCCC--CCCccCCHHHHHHHHHh-cC
Confidence 3455677899865 99999999999999764 53
No 177
>2el5_A Zinc finger protein 268; alternative splicing, DNA-binding, metal-binding, nuclear protein, repeat, transcription, transcription regulation; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2eol_A 2emv_A 2eqw_A 2en0_A 2epy_A
Probab=76.39 E-value=0.95 Score=29.03 Aligned_cols=29 Identities=24% Similarity=0.402 Sum_probs=23.9
Q ss_pred eecCCcEEEecCCchhhhhcChhHHHHhhhh
Q 011117 116 IKLMEGIFICAAPHCLKSFLKKTEFEAHIHV 146 (493)
Q Consensus 116 i~p~esIFIC~~~gCkRtYLSqRDLQAHInh 146 (493)
++..+..|.|. .|.|+|.+..+|..|++.
T Consensus 4 ~H~~~k~~~C~--~C~k~f~~~~~L~~H~~~ 32 (42)
T 2el5_A 4 GSSGENPYECS--ECGKAFNRKDQLISHQRT 32 (42)
T ss_dssp SSSSCCSEECS--SSCCEESSHHHHHHHHGG
T ss_pred CCCCCCCccCC--CcChhhCCHHHHHHHHHh
Confidence 45566789986 499999999999999754
No 178
>2ytp_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=76.32 E-value=0.99 Score=29.75 Aligned_cols=32 Identities=25% Similarity=0.487 Sum_probs=25.6
Q ss_pred eeecCCcEEEecCCchhhhhcChhHHHHhhhhhhc
Q 011117 115 TIKLMEGIFICAAPHCLKSFLKKTEFEAHIHVSHA 149 (493)
Q Consensus 115 ri~p~esIFIC~~~gCkRtYLSqRDLQAHInhrH~ 149 (493)
+++..+..|.|.. |.|+|.+..+|+.|++. |.
T Consensus 5 ~~H~~~k~~~C~~--C~k~F~~~~~L~~H~~~-H~ 36 (46)
T 2ytp_A 5 SSGTGERHYECSE--CGKAFARKSTLIMHQRI-HT 36 (46)
T ss_dssp CSSCCCCCEECSS--SCCEESSHHHHHHHHTT-TS
T ss_pred cCcCCCCCeECCc--CCcccCCHHHHHHHHHH-hC
Confidence 3455677899864 99999999999999764 53
No 179
>2emy_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=76.27 E-value=1.1 Score=29.44 Aligned_cols=32 Identities=28% Similarity=0.457 Sum_probs=25.8
Q ss_pred eeecCCcEEEecCCchhhhhcChhHHHHhhhhhhc
Q 011117 115 TIKLMEGIFICAAPHCLKSFLKKTEFEAHIHVSHA 149 (493)
Q Consensus 115 ri~p~esIFIC~~~gCkRtYLSqRDLQAHInhrH~ 149 (493)
+++..+.-|.|.. |.|+|.+..+|..|++. |.
T Consensus 5 ~~H~~~k~~~C~~--C~k~F~~~~~L~~H~~~-H~ 36 (46)
T 2emy_A 5 SSGTGENPYECHE--CGKAFSRKYQLISHQRT-HA 36 (46)
T ss_dssp CCCCSSCCEECSS--SCCEESSHHHHHHHHHH-HT
T ss_pred CCCCCCcCcCCCC--CCcccCcHHHHHHHHHH-cC
Confidence 3455677899875 99999999999999865 43
No 180
>2eps_A POZ-, at HOOK-, and zinc finger-containing protein 1; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1
Probab=76.27 E-value=1.1 Score=30.92 Aligned_cols=31 Identities=26% Similarity=0.573 Sum_probs=25.3
Q ss_pred cCCcEEEecCCchhhhhcChhHHHHhhhhhhcc
Q 011117 118 LMEGIFICAAPHCLKSFLKKTEFEAHIHVSHAD 150 (493)
Q Consensus 118 p~esIFIC~~~gCkRtYLSqRDLQAHInhrH~~ 150 (493)
..+..|.|.. |.|.|.+..+|..|++..|..
T Consensus 8 ~~~k~~~C~~--C~k~f~~~~~L~~H~~~~H~~ 38 (54)
T 2eps_A 8 SVGKPYICQS--CGKGFSRPDHLNGHIKQVHTS 38 (54)
T ss_dssp CSSCCEECSS--SCCEESSHHHHHHHHHHTSCC
T ss_pred CCCCCeECCC--CCcccCCHHHHHHHHHHhcCC
Confidence 3466799865 999999999999998766654
No 181
>2ysp_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=76.23 E-value=1.1 Score=29.31 Aligned_cols=31 Identities=26% Similarity=0.440 Sum_probs=25.2
Q ss_pred eecCCcEEEecCCchhhhhcChhHHHHhhhhhhc
Q 011117 116 IKLMEGIFICAAPHCLKSFLKKTEFEAHIHVSHA 149 (493)
Q Consensus 116 i~p~esIFIC~~~gCkRtYLSqRDLQAHInhrH~ 149 (493)
++..+..|.|. .|.|+|.+..+|+.|++. |.
T Consensus 6 ~h~~~k~~~C~--~C~k~f~~~~~L~~H~~~-H~ 36 (46)
T 2ysp_A 6 SGTGEKPYKCE--KCGKGYNSKFNLDMHQKV-HT 36 (46)
T ss_dssp CCSSCCSEEET--TTTEEESCHHHHHHHHTT-SC
T ss_pred CCCCCCCeECC--CCCCccCCHHHHHHHHHh-hC
Confidence 45567789996 499999999999999764 43
No 182
>2els_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=76.21 E-value=1.1 Score=27.75 Aligned_cols=26 Identities=35% Similarity=0.646 Sum_probs=22.2
Q ss_pred CCcEEEecCCchhhhhcChhHHHHhhhh
Q 011117 119 MEGIFICAAPHCLKSFLKKTEFEAHIHV 146 (493)
Q Consensus 119 ~esIFIC~~~gCkRtYLSqRDLQAHInh 146 (493)
.+..|.|.. |.|.|.....|+.|++.
T Consensus 6 ~~k~~~C~~--C~k~f~~~~~l~~H~~~ 31 (36)
T 2els_A 6 SGKIFTCEY--CNKVFKFKHSLQAHLRI 31 (36)
T ss_dssp CCCCEECTT--TCCEESSHHHHHHHHHH
T ss_pred CCCCEECCC--CCceeCCHHHHHHHHHH
Confidence 456799865 99999999999999764
No 183
>2emf_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=76.09 E-value=1 Score=29.71 Aligned_cols=29 Identities=24% Similarity=0.441 Sum_probs=24.3
Q ss_pred eecCCcEEEecCCchhhhhcChhHHHHhhhh
Q 011117 116 IKLMEGIFICAAPHCLKSFLKKTEFEAHIHV 146 (493)
Q Consensus 116 i~p~esIFIC~~~gCkRtYLSqRDLQAHInh 146 (493)
++..+..|.|.. |.|.|.+..+|+.|++.
T Consensus 6 ~H~~~k~~~C~~--C~k~F~~~~~L~~H~~~ 34 (46)
T 2emf_A 6 SGTGGKHFECTE--CGKAFTRKSTLSMHQKI 34 (46)
T ss_dssp SSSSSCCEECSS--SCCEESCHHHHHHHGGG
T ss_pred ccCCCCCeECCC--CCchhCCHHHHHHHHHH
Confidence 455677899875 99999999999999864
No 184
>2em5_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=75.94 E-value=0.98 Score=29.77 Aligned_cols=31 Identities=19% Similarity=0.381 Sum_probs=25.2
Q ss_pred eecCCcEEEecCCchhhhhcChhHHHHhhhhhhc
Q 011117 116 IKLMEGIFICAAPHCLKSFLKKTEFEAHIHVSHA 149 (493)
Q Consensus 116 i~p~esIFIC~~~gCkRtYLSqRDLQAHInhrH~ 149 (493)
++..+..|.|.. |.|.|.+..+|..|++. |.
T Consensus 6 ~H~~~~~~~C~~--C~k~f~~~~~L~~H~~~-H~ 36 (46)
T 2em5_A 6 SGSSTKSHQCHE--CGRGFTLKSHLNQHQRI-HT 36 (46)
T ss_dssp CCCCSCSEECSS--SCCEESSHHHHHHHHTT-TS
T ss_pred CCCCCCCeECCc--CCCccCCHHHHHHHHHH-hC
Confidence 455667899876 99999999999999854 53
No 185
>2ytf_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=75.91 E-value=1 Score=29.46 Aligned_cols=29 Identities=28% Similarity=0.427 Sum_probs=24.2
Q ss_pred eecCCcEEEecCCchhhhhcChhHHHHhhhh
Q 011117 116 IKLMEGIFICAAPHCLKSFLKKTEFEAHIHV 146 (493)
Q Consensus 116 i~p~esIFIC~~~gCkRtYLSqRDLQAHInh 146 (493)
++..+..|.|.. |.|+|.+..+|..|++.
T Consensus 6 ~H~~~k~~~C~~--C~k~f~~~~~L~~H~~~ 34 (46)
T 2ytf_A 6 SGTGEKPFECSE--CQKAFNTKSNLIVHQRT 34 (46)
T ss_dssp SSCCCCSEECSS--SCCEESSHHHHHHHHHT
T ss_pred CCCCCCCcCCCC--CCcccCCHHHHHHHHHH
Confidence 455667899875 99999999999999764
No 186
>3t7l_A Zinc finger FYVE domain-containing protein 16; structural genomics consortium, SGC, lipid BIND protein, transport protein; 1.09A {Homo sapiens}
Probab=75.90 E-value=0.89 Score=36.98 Aligned_cols=50 Identities=28% Similarity=0.682 Sum_probs=35.7
Q ss_pred ccccccCCCcccccccc---ccccccccchhhhhC-------C---CCcccchHhHhhheeee
Q 011117 68 RVHFCVRCDYPIAIYGR---LNPCEHVFCLDCARS-------D---SMCYLCDERIQKIQTIK 117 (493)
Q Consensus 68 KvhFCdICdlPI~iygR---mIPCKHVFCydCA~s-------D---ktCP~Cna~VqrIEri~ 117 (493)
....|.+|...|....| ---|+++||.+|... + .+|-.|-+.++.++...
T Consensus 19 ~~~~C~~C~~~F~~~~RrhhCr~CG~v~C~~Cs~~~~~l~~~~~~~RVC~~C~~~l~~~~~~~ 81 (90)
T 3t7l_A 19 EAPNCMNCQVKFTFTKRRHHCRACGKVFCGVCCNRKCKLQYLEKEARVCVVCYETISKAQAFE 81 (90)
T ss_dssp GCCBCTTTCCBCCSSSCCEECTTTCCEECGGGSCEEEEETTTTEEEEECHHHHHHHHHHC---
T ss_pred cCCcCcCCCCcccchhhCccccCCCCEECCcccCCeeecCCCCCCCeECHHHHHHHHHHhhhc
Confidence 36789999988876544 346899999999871 1 57888888887776543
No 187
>2el4_A Zinc finger protein 268; alternative splicing, DNA-binding, metal-binding, nuclear protein, repeat, transcription, transcription regulation; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2eog_A 2em1_A 2emw_A 2eok_A
Probab=75.75 E-value=1.1 Score=29.32 Aligned_cols=29 Identities=21% Similarity=0.312 Sum_probs=24.2
Q ss_pred eecCCcEEEecCCchhhhhcChhHHHHhhhh
Q 011117 116 IKLMEGIFICAAPHCLKSFLKKTEFEAHIHV 146 (493)
Q Consensus 116 i~p~esIFIC~~~gCkRtYLSqRDLQAHInh 146 (493)
++..+..|.|.. |.|+|.+..+|..|++.
T Consensus 6 ~H~~~k~~~C~~--C~k~f~~~~~L~~H~~~ 34 (46)
T 2el4_A 6 SGTGVKPYGCSQ--CAKTFSLKSQLIVHQRS 34 (46)
T ss_dssp CSCCCCSEECSS--SSCEESSHHHHHHHGGG
T ss_pred CCCCCCceECCC--CCchhCCHHHHHHHHHH
Confidence 455677899875 99999999999999754
No 188
>2yrj_A Zinc finger protein 473; C2H2-type zinc finger, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=75.71 E-value=1.1 Score=29.29 Aligned_cols=29 Identities=24% Similarity=0.458 Sum_probs=24.2
Q ss_pred eecCCcEEEecCCchhhhhcChhHHHHhhhh
Q 011117 116 IKLMEGIFICAAPHCLKSFLKKTEFEAHIHV 146 (493)
Q Consensus 116 i~p~esIFIC~~~gCkRtYLSqRDLQAHInh 146 (493)
++..+..|.|.. |.|.|....+|..|++.
T Consensus 6 ~H~~~~~~~C~~--C~k~f~~~~~L~~H~~~ 34 (46)
T 2yrj_A 6 SGTGEKPYRCGE--CGKAFAQKANLTQHQRI 34 (46)
T ss_dssp CCCCCCCEECSS--SCCEESSHHHHHHHHTT
T ss_pred CCCCCCCeECCC--CCCccCCHHHHHHHHHH
Confidence 455677899865 99999999999999754
No 189
>2el6_A Zinc finger protein 268; alternative splicing, DNA-binding, metal-binding, nuclear protein, repeat, transcription, transcription regulation; NMR {Homo sapiens}
Probab=75.68 E-value=1.1 Score=29.60 Aligned_cols=32 Identities=25% Similarity=0.393 Sum_probs=25.7
Q ss_pred eeecCCcEEEecCCchhhhhcChhHHHHhhhhhhc
Q 011117 115 TIKLMEGIFICAAPHCLKSFLKKTEFEAHIHVSHA 149 (493)
Q Consensus 115 ri~p~esIFIC~~~gCkRtYLSqRDLQAHInhrH~ 149 (493)
+++..+..|.|.. |.|.|.+..+|..|++. |.
T Consensus 5 ~~h~~~k~~~C~~--C~k~f~~~~~L~~H~~~-H~ 36 (46)
T 2el6_A 5 SSGAGVNPYKCSQ--CEKSFSGKLRLLVHQRM-HT 36 (46)
T ss_dssp CSSCCCCSEECSS--SSCEESSHHHHHHHHGG-GC
T ss_pred CCCCCCCCeECCC--CCcccCCHHHHHHHHHH-cC
Confidence 3455677899876 99999999999999764 54
No 190
>2emj_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2eoi_A
Probab=75.65 E-value=1.1 Score=29.50 Aligned_cols=31 Identities=32% Similarity=0.495 Sum_probs=25.1
Q ss_pred eecCCcEEEecCCchhhhhcChhHHHHhhhhhhc
Q 011117 116 IKLMEGIFICAAPHCLKSFLKKTEFEAHIHVSHA 149 (493)
Q Consensus 116 i~p~esIFIC~~~gCkRtYLSqRDLQAHInhrH~ 149 (493)
++..+..|.|.. |.|.|.+..+|+.|++. |.
T Consensus 6 ~H~~~k~~~C~~--C~k~F~~~~~L~~H~~~-H~ 36 (46)
T 2emj_A 6 SGTGEKPFECAE--CGKSFSISSQLATHQRI-HT 36 (46)
T ss_dssp CCCCCCSEECSS--SSCEESSHHHHHHHHHH-HT
T ss_pred CCCCCCCEECCC--CCcccCCHHHHHHHHHH-hC
Confidence 455677899865 99999999999999864 54
No 191
>2yte_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=75.59 E-value=0.7 Score=29.57 Aligned_cols=31 Identities=23% Similarity=0.426 Sum_probs=24.5
Q ss_pred eecCCcEEEecCCchhhhhcChhHHHHhhhhhhc
Q 011117 116 IKLMEGIFICAAPHCLKSFLKKTEFEAHIHVSHA 149 (493)
Q Consensus 116 i~p~esIFIC~~~gCkRtYLSqRDLQAHInhrH~ 149 (493)
++..+..|.|. .|.|+|.+..+|..|++. |.
T Consensus 4 ~H~~~k~~~C~--~C~k~f~~~~~L~~H~~~-H~ 34 (42)
T 2yte_A 4 GSSGEKPYSCA--ECKETFSDNNRLVQHQKM-HT 34 (42)
T ss_dssp SSCSCCSCBCT--TTCCBCSSHHHHHHHHHH-TS
T ss_pred CcCCCCCeECC--CCCCccCCHHHHHHHHHH-hC
Confidence 34556778886 499999999999999864 53
No 192
>2ep2_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=75.55 E-value=1 Score=29.53 Aligned_cols=31 Identities=32% Similarity=0.504 Sum_probs=25.2
Q ss_pred eecCCcEEEecCCchhhhhcChhHHHHhhhhhhc
Q 011117 116 IKLMEGIFICAAPHCLKSFLKKTEFEAHIHVSHA 149 (493)
Q Consensus 116 i~p~esIFIC~~~gCkRtYLSqRDLQAHInhrH~ 149 (493)
++..+..|.|.. |.|.|.+..+|..|++ .|.
T Consensus 6 ~H~~~k~~~C~~--C~k~f~~~~~L~~H~~-~H~ 36 (46)
T 2ep2_A 6 SGTGEKPYECSI--CGKSFTKKSQLHVHQQ-IHT 36 (46)
T ss_dssp CSSCCCSEECSS--SCCEESSHHHHHHHHH-TTS
T ss_pred CCCCCcCcCCCC--CCcccCCHHHHHHHHH-HhC
Confidence 455677899876 9999999999999986 353
No 193
>2epw_A Zinc finger protein 268; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=75.48 E-value=1 Score=29.40 Aligned_cols=31 Identities=26% Similarity=0.330 Sum_probs=25.2
Q ss_pred eecCCcEEEecCCchhhhhcChhHHHHhhhhhhc
Q 011117 116 IKLMEGIFICAAPHCLKSFLKKTEFEAHIHVSHA 149 (493)
Q Consensus 116 i~p~esIFIC~~~gCkRtYLSqRDLQAHInhrH~ 149 (493)
++..+..|.|.. |.|+|.+..+|+.|++. |.
T Consensus 6 ~H~~~k~~~C~~--C~k~F~~~~~L~~H~~~-H~ 36 (46)
T 2epw_A 6 SGTGEKPCKCTE--CGKAFCWKSQLIMHQRT-HV 36 (46)
T ss_dssp CCCCCCSEECSS--SCCEESSSHHHHHHHHH-CC
T ss_pred cCCCCCCeeCCC--CCCccCCHHHHHHHHHH-hC
Confidence 455667899875 99999999999999864 53
No 194
>2eoj_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=75.46 E-value=0.95 Score=29.33 Aligned_cols=29 Identities=24% Similarity=0.413 Sum_probs=24.2
Q ss_pred eecCCcEEEecCCchhhhhcChhHHHHhhhh
Q 011117 116 IKLMEGIFICAAPHCLKSFLKKTEFEAHIHV 146 (493)
Q Consensus 116 i~p~esIFIC~~~gCkRtYLSqRDLQAHInh 146 (493)
++..+..|.|.. |.|+|....+|..|++.
T Consensus 6 ~H~~~k~~~C~~--C~k~f~~~~~L~~H~~~ 34 (44)
T 2eoj_A 6 SGTGENPYECCE--CGKVFSRKDQLVSHQKT 34 (44)
T ss_dssp SSSSCCSCEETT--TTEECSSHHHHHHHHTT
T ss_pred ccCCCcCeeCCC--CCCccCCHHHHHHHHHH
Confidence 455677899975 99999999999999764
No 195
>2en9_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=75.41 E-value=0.76 Score=30.32 Aligned_cols=31 Identities=23% Similarity=0.548 Sum_probs=25.0
Q ss_pred eecCCcEEEecCCchhhhhcChhHHHHhhhhhhc
Q 011117 116 IKLMEGIFICAAPHCLKSFLKKTEFEAHIHVSHA 149 (493)
Q Consensus 116 i~p~esIFIC~~~gCkRtYLSqRDLQAHInhrH~ 149 (493)
++..+..|.|.. |.|.|.+..+|+.|++. |.
T Consensus 6 ~H~~~k~~~C~~--C~k~F~~~~~L~~H~~~-H~ 36 (46)
T 2en9_A 6 SGAGKKLFKCNE--CKKTFTQSSSLTVHQRI-HT 36 (46)
T ss_dssp SCCSSCCCBCTT--TCCBCSSHHHHHHHHHH-HT
T ss_pred CCCCCCCEECCc--cCcccCCHHHHHHHHHH-cC
Confidence 455677899875 99999999999999764 53
No 196
>3k1l_B Fancl; UBC, ring, RWD, ligase; HET: MAL CIT; 3.20A {Drosophila melanogaster}
Probab=75.35 E-value=0.65 Score=47.56 Aligned_cols=43 Identities=19% Similarity=0.292 Sum_probs=32.0
Q ss_pred cccccCCCcccccccc-------ccccccccchhhhh----C--C---------CCcccchHhHh
Q 011117 69 VHFCVRCDYPIAIYGR-------LNPCEHVFCLDCAR----S--D---------SMCYLCDERIQ 111 (493)
Q Consensus 69 vhFCdICdlPI~iygR-------mIPCKHVFCydCA~----s--D---------ktCP~Cna~Vq 111 (493)
.-.|.||=.-+..-+. +..|+|.|-..|.. + . ..||.|++.|+
T Consensus 308 ~~ECaICys~~l~~g~lPdk~C~n~~C~h~FH~~CL~kWLrs~~~sRqSFnvi~G~CPyCr~pIs 372 (381)
T 3k1l_B 308 ELRCNICFAYRLDGGEVPLVSCDNAKCVLKCHAVCLEEWFKTLMDGKTFLEVSFGQCPFCKAKLS 372 (381)
T ss_dssp CCSCSSSCCSSCTTCCCCCBCCSCTTCCCCBCSGGGHHHHHHHHSSSCTTTCCEEECTTTCCEEE
T ss_pred CccCcccceeecCCCCCccccccCCccCCccchHHHHHHHHhCCCccccccccCCCCCCCCCcCC
Confidence 4589999766554333 34799999999996 1 1 46999999875
No 197
>2yu5_A Zinc finger protein 473; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=75.31 E-value=1.1 Score=29.16 Aligned_cols=29 Identities=21% Similarity=0.364 Sum_probs=24.4
Q ss_pred eecCCcEEEecCCchhhhhcChhHHHHhhhh
Q 011117 116 IKLMEGIFICAAPHCLKSFLKKTEFEAHIHV 146 (493)
Q Consensus 116 i~p~esIFIC~~~gCkRtYLSqRDLQAHInh 146 (493)
++..+.-|.|.. |.|.|.....|..|++.
T Consensus 6 ~H~~~k~~~C~~--C~k~f~~~~~L~~H~~~ 34 (44)
T 2yu5_A 6 SGAGENPFKCSK--CDRVFTQRNYLVQHERT 34 (44)
T ss_dssp CCSCCCSEECSS--SSCEESSSHHHHHHHHH
T ss_pred ccCCCCCeECCC--CCchhCCHHHHHHHhHh
Confidence 455677899875 99999999999999864
No 198
>2ytk_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=75.20 E-value=1.1 Score=29.41 Aligned_cols=31 Identities=23% Similarity=0.441 Sum_probs=25.2
Q ss_pred eecCCcEEEecCCchhhhhcChhHHHHhhhhhhc
Q 011117 116 IKLMEGIFICAAPHCLKSFLKKTEFEAHIHVSHA 149 (493)
Q Consensus 116 i~p~esIFIC~~~gCkRtYLSqRDLQAHInhrH~ 149 (493)
++..+..|.|.. |.|.|.+..+|+.|++. |.
T Consensus 6 ~H~~~~~~~C~~--C~k~f~~~~~L~~H~~~-H~ 36 (46)
T 2ytk_A 6 SGSGEKPYKCNE--CGKVFTQNSHLTNHWRI-HT 36 (46)
T ss_dssp CSSSSCSEECSS--SCCEESSHHHHHHHHHH-HS
T ss_pred cCCCCCCEeCCc--CCCccCCHHHHHHHHHH-HC
Confidence 455677899875 99999999999999864 53
No 199
>2m0f_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc fingers, transcription; NMR {Homo sapiens}
Probab=75.17 E-value=1.2 Score=25.58 Aligned_cols=22 Identities=23% Similarity=0.638 Sum_probs=18.9
Q ss_pred EEecCCchhhhhcChhHHHHhhhh
Q 011117 123 FICAAPHCLKSFLKKTEFEAHIHV 146 (493)
Q Consensus 123 FIC~~~gCkRtYLSqRDLQAHInh 146 (493)
|.|.. |.++|.+..+|..|++.
T Consensus 3 ~~C~~--C~k~f~~~~~l~~H~~~ 24 (29)
T 2m0f_A 3 LKCRE--CGKQFTTSGNLKRHLRI 24 (29)
T ss_dssp EECTT--TSCEESCHHHHHHHHHH
T ss_pred ccCCC--CCCccCChhHHHHHHHH
Confidence 67765 99999999999999754
No 200
>2em2_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=75.13 E-value=1.1 Score=29.49 Aligned_cols=29 Identities=24% Similarity=0.476 Sum_probs=24.2
Q ss_pred eecCCcEEEecCCchhhhhcChhHHHHhhhh
Q 011117 116 IKLMEGIFICAAPHCLKSFLKKTEFEAHIHV 146 (493)
Q Consensus 116 i~p~esIFIC~~~gCkRtYLSqRDLQAHInh 146 (493)
++..+..|.|.. |.|.|.+..+|..|++.
T Consensus 6 ~H~~~k~~~C~~--C~k~f~~~~~L~~H~~~ 34 (46)
T 2em2_A 6 SGSGEKPFKCKE--CGKAFRQNIHLASHLRI 34 (46)
T ss_dssp SCCCCCSEECSS--SCCEESSHHHHHHHHHH
T ss_pred CCCCCCCEECCc--CCchhCCHHHHHHHHHH
Confidence 455677899875 99999999999999764
No 201
>2kvh_A Zinc finger and BTB domain-containing protein 32; protein/DNA, metal-binding, transcription; NMR {Mus musculus}
Probab=75.07 E-value=1.2 Score=25.83 Aligned_cols=23 Identities=17% Similarity=0.407 Sum_probs=19.3
Q ss_pred EEEecCCchhhhhcChhHHHHhhhh
Q 011117 122 IFICAAPHCLKSFLKKTEFEAHIHV 146 (493)
Q Consensus 122 IFIC~~~gCkRtYLSqRDLQAHInh 146 (493)
.|.|. .|.|.|.+..+|..|++.
T Consensus 3 ~~~C~--~C~k~f~~~~~l~~H~~~ 25 (27)
T 2kvh_A 3 PFSCS--LCPQRSRDFSAMTKHLRT 25 (27)
T ss_dssp CEECS--SSSCEESSHHHHHHHHHH
T ss_pred CccCC--CcChhhCCHHHHHHHHHH
Confidence 47775 599999999999999753
No 202
>2em9_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2yrh_A
Probab=75.02 E-value=1.2 Score=29.08 Aligned_cols=31 Identities=29% Similarity=0.340 Sum_probs=25.2
Q ss_pred eecCCcEEEecCCchhhhhcChhHHHHhhhhhhc
Q 011117 116 IKLMEGIFICAAPHCLKSFLKKTEFEAHIHVSHA 149 (493)
Q Consensus 116 i~p~esIFIC~~~gCkRtYLSqRDLQAHInhrH~ 149 (493)
++..+..|.|.. |.|.|.+..+|+.|++. |.
T Consensus 6 ~H~~~k~~~C~~--C~k~f~~~~~L~~H~~~-H~ 36 (46)
T 2em9_A 6 SGTGEKPYNCKE--CGKSFRWASCLLKHQRV-HS 36 (46)
T ss_dssp SCCCCCSEECSS--SCCEESSHHHHHHHGGG-GT
T ss_pred CCCCCcCeECCc--cccccCChHHHHHHHHH-hC
Confidence 455677899875 99999999999999754 43
No 203
>2ep3_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=75.01 E-value=1 Score=29.59 Aligned_cols=29 Identities=24% Similarity=0.438 Sum_probs=24.3
Q ss_pred eecCCcEEEecCCchhhhhcChhHHHHhhhh
Q 011117 116 IKLMEGIFICAAPHCLKSFLKKTEFEAHIHV 146 (493)
Q Consensus 116 i~p~esIFIC~~~gCkRtYLSqRDLQAHInh 146 (493)
++..+..|.|.. |.|+|.+..+|..|++.
T Consensus 6 ~H~~~k~~~C~~--C~k~f~~~~~L~~H~~~ 34 (46)
T 2ep3_A 6 SGTGEKPYRCAE--CGKAFTDRSNLFTHQKI 34 (46)
T ss_dssp SSSCCCSEECSS--SCCEESSHHHHHHHHTT
T ss_pred CCCCCCCeECCC--CCchhCCHHHHHHHHHH
Confidence 455677899875 99999999999999854
No 204
>2kmk_A Zinc finger protein GFI-1; tandem repeat zinc finger domain, protein-DNA complex, DNA-B metal-binding, nucleus; HET: DNA; NMR {Rattus norvegicus}
Probab=74.93 E-value=0.88 Score=32.61 Aligned_cols=33 Identities=21% Similarity=0.415 Sum_probs=26.2
Q ss_pred eeecCCcEEEecCCchhhhhcChhHHHHhhhhhhc
Q 011117 115 TIKLMEGIFICAAPHCLKSFLKKTEFEAHIHVSHA 149 (493)
Q Consensus 115 ri~p~esIFIC~~~gCkRtYLSqRDLQAHInhrH~ 149 (493)
+++..+..|.|.. |.+.|.+..+|+.|++.-+.
T Consensus 22 ~~h~~~~~~~C~~--C~~~f~~~~~l~~H~~~h~~ 54 (82)
T 2kmk_A 22 LIHSDTRPYPCQY--CGKRFHQKSDMKKHTFIHTG 54 (82)
T ss_dssp HHHHTCCCEECSS--SCCEESSHHHHHHHHHHHHT
T ss_pred HHcCCCCCeeCCc--CChhhCCHHHHHHHHHHhcC
Confidence 3455677899876 99999999999999875443
No 205
>2em7_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=74.76 E-value=1.1 Score=29.36 Aligned_cols=31 Identities=26% Similarity=0.453 Sum_probs=24.9
Q ss_pred eecCCcEEEecCCchhhhhcChhHHHHhhhhhhc
Q 011117 116 IKLMEGIFICAAPHCLKSFLKKTEFEAHIHVSHA 149 (493)
Q Consensus 116 i~p~esIFIC~~~gCkRtYLSqRDLQAHInhrH~ 149 (493)
++..+..|.|.. |.|+|.+..+|+.|++. |.
T Consensus 6 ~H~~~k~~~C~~--C~k~f~~~~~L~~H~~~-H~ 36 (46)
T 2em7_A 6 SGTGEKPYKCEE--CGKGFICRRDLYTHHMV-HT 36 (46)
T ss_dssp SSSCCCSEECSS--SCCEESCHHHHHHHGGG-GT
T ss_pred CCCCCcCccCCC--ccchhCCHHHHHHHHHH-hC
Confidence 455667899865 99999999999999764 43
No 206
>2en1_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=74.63 E-value=1.3 Score=29.06 Aligned_cols=31 Identities=29% Similarity=0.509 Sum_probs=24.9
Q ss_pred eecCCcEEEecCCchhhhhcChhHHHHhhhhhhc
Q 011117 116 IKLMEGIFICAAPHCLKSFLKKTEFEAHIHVSHA 149 (493)
Q Consensus 116 i~p~esIFIC~~~gCkRtYLSqRDLQAHInhrH~ 149 (493)
++..+..|.|.. |.|+|.+..+|..|++. |.
T Consensus 6 ~H~~~~~~~C~~--C~k~f~~~~~L~~H~~~-H~ 36 (46)
T 2en1_A 6 SGSGEKPFKCEE--CGKRFTQNSQLHSHQRV-HT 36 (46)
T ss_dssp CCCCCCSEEETT--TTEEESSHHHHHHHGGG-GS
T ss_pred CCCCCCCeeCCC--CCcccCCHHHHHHHHHH-cC
Confidence 455667899965 99999999999999854 53
No 207
>2elr_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=74.62 E-value=0.87 Score=28.05 Aligned_cols=27 Identities=22% Similarity=0.405 Sum_probs=22.0
Q ss_pred cCCcEEEecCCchhhhhcChhHHHHhhhh
Q 011117 118 LMEGIFICAAPHCLKSFLKKTEFEAHIHV 146 (493)
Q Consensus 118 p~esIFIC~~~gCkRtYLSqRDLQAHInh 146 (493)
..+..|.|.. |.|.|.+..+|..|+..
T Consensus 5 ~~~~~~~C~~--C~k~f~~~~~l~~H~~~ 31 (36)
T 2elr_A 5 SSGKTHLCDM--CGKKFKSKGTLKSHKLL 31 (36)
T ss_dssp CCCSSCBCTT--TCCBCSSHHHHHHHHHH
T ss_pred CCCCCeecCc--CCCCcCchHHHHHHHHH
Confidence 3456788864 99999999999999754
No 208
>2ep0_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=74.58 E-value=1.1 Score=29.42 Aligned_cols=31 Identities=26% Similarity=0.444 Sum_probs=25.0
Q ss_pred eecCCcEEEecCCchhhhhcChhHHHHhhhhhhc
Q 011117 116 IKLMEGIFICAAPHCLKSFLKKTEFEAHIHVSHA 149 (493)
Q Consensus 116 i~p~esIFIC~~~gCkRtYLSqRDLQAHInhrH~ 149 (493)
++..+.-|.|.. |.|.|.+..+|+.|++. |.
T Consensus 6 ~h~~~~~~~C~~--C~k~f~~~~~L~~H~~~-H~ 36 (46)
T 2ep0_A 6 SGTGEKPYKCDV--CHKSFRYGSSLTVHQRI-HT 36 (46)
T ss_dssp SSTTCCSEECSS--SCCEESSHHHHHHHHTT-TS
T ss_pred CCCCCCCeeCcc--cCcccCChHHHHHHHHH-hC
Confidence 455677899865 99999999999999764 54
No 209
>2yto_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=74.54 E-value=1.3 Score=29.15 Aligned_cols=32 Identities=25% Similarity=0.472 Sum_probs=25.6
Q ss_pred eeecCCcEEEecCCchhhhhcChhHHHHhhhhhhc
Q 011117 115 TIKLMEGIFICAAPHCLKSFLKKTEFEAHIHVSHA 149 (493)
Q Consensus 115 ri~p~esIFIC~~~gCkRtYLSqRDLQAHInhrH~ 149 (493)
+++..+..|.|.. |.|.|....+|..|++. |.
T Consensus 5 ~~H~~~k~~~C~~--C~k~f~~~~~L~~H~~~-H~ 36 (46)
T 2yto_A 5 SSGTGEKPYKCSD--CGKAFTRKSGLHIHQQS-HT 36 (46)
T ss_dssp CCCCSCCCEECSS--SCCEESSHHHHHHHHHH-HT
T ss_pred cccCCCCCEECcc--cCCccCCHhHHHHHHHH-cC
Confidence 3455677899864 99999999999999764 53
No 210
>2ytj_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=74.49 E-value=1.1 Score=29.49 Aligned_cols=31 Identities=29% Similarity=0.523 Sum_probs=25.1
Q ss_pred eecCCcEEEecCCchhhhhcChhHHHHhhhhhhc
Q 011117 116 IKLMEGIFICAAPHCLKSFLKKTEFEAHIHVSHA 149 (493)
Q Consensus 116 i~p~esIFIC~~~gCkRtYLSqRDLQAHInhrH~ 149 (493)
++..+..|.|.. |.|+|.+..+|..|++. |.
T Consensus 6 ~H~~~k~~~C~~--C~k~f~~~~~L~~H~~~-H~ 36 (46)
T 2ytj_A 6 SGTGEKPYICAE--CGKAFTIRSNLIKHQKI-HT 36 (46)
T ss_dssp TTSSCCSEECSS--SCCEESSHHHHHHHHHH-TS
T ss_pred CCCCCcCeECCC--CChhhCCHHHHHHHHHH-cC
Confidence 455677899876 99999999999999864 54
No 211
>2emg_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=74.42 E-value=0.81 Score=30.08 Aligned_cols=31 Identities=35% Similarity=0.564 Sum_probs=24.7
Q ss_pred eecCCcEEEecCCchhhhhcChhHHHHhhhhhhc
Q 011117 116 IKLMEGIFICAAPHCLKSFLKKTEFEAHIHVSHA 149 (493)
Q Consensus 116 i~p~esIFIC~~~gCkRtYLSqRDLQAHInhrH~ 149 (493)
++..+..|.|.. |.|.|.+..+|+.|++. |.
T Consensus 6 ~H~~~k~~~C~~--C~k~f~~~~~L~~H~~~-H~ 36 (46)
T 2emg_A 6 SGTGENPFICSE--CGKVFTHKTNLIIHQKI-HT 36 (46)
T ss_dssp CCCSCCSCBCTT--TCCBCSSHHHHHHHHTT-TS
T ss_pred CCCCCCCEECCc--cCcccCCHHHHHHHHHH-hC
Confidence 455567799865 99999999999999764 53
No 212
>2eq1_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=74.35 E-value=0.85 Score=29.96 Aligned_cols=31 Identities=23% Similarity=0.373 Sum_probs=25.0
Q ss_pred eecCCcEEEecCCchhhhhcChhHHHHhhhhhhc
Q 011117 116 IKLMEGIFICAAPHCLKSFLKKTEFEAHIHVSHA 149 (493)
Q Consensus 116 i~p~esIFIC~~~gCkRtYLSqRDLQAHInhrH~ 149 (493)
++..+..|.|.. |.|.|....+|..|++ .|.
T Consensus 6 ~H~~~k~~~C~~--C~k~f~~~~~L~~H~~-~H~ 36 (46)
T 2eq1_A 6 SGTGEKPYKCNE--CGKAFRAHSNLTTHQV-IHT 36 (46)
T ss_dssp CCCCSCCCCCTT--TTCCCSSHHHHHHHHT-TTC
T ss_pred ccCCCCCeECCc--CChhhCCHHHHHHHHH-HhC
Confidence 455667899875 9999999999999976 354
No 213
>2emp_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=74.34 E-value=1.1 Score=29.31 Aligned_cols=29 Identities=17% Similarity=0.316 Sum_probs=24.4
Q ss_pred eecCCcEEEecCCchhhhhcChhHHHHhhhh
Q 011117 116 IKLMEGIFICAAPHCLKSFLKKTEFEAHIHV 146 (493)
Q Consensus 116 i~p~esIFIC~~~gCkRtYLSqRDLQAHInh 146 (493)
++..+..|.|.. |.|.|.+..+|..|++.
T Consensus 6 ~H~~~k~~~C~~--C~k~f~~~~~L~~H~~~ 34 (46)
T 2emp_A 6 SGTGVKPYMCNE--CGKAFSVYSSLTTHQVI 34 (46)
T ss_dssp CSSCCCSEECSS--SCCEESCHHHHHHHHHH
T ss_pred ccCCCcCeECCC--CCchhCCHHHHHHHHHH
Confidence 455677899876 99999999999999864
No 214
>2elv_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=74.31 E-value=1.3 Score=27.45 Aligned_cols=27 Identities=19% Similarity=0.421 Sum_probs=22.4
Q ss_pred cCCcEEEecCCchhhhhcChhHHHHhhhh
Q 011117 118 LMEGIFICAAPHCLKSFLKKTEFEAHIHV 146 (493)
Q Consensus 118 p~esIFIC~~~gCkRtYLSqRDLQAHInh 146 (493)
..+..|.|.. |.|.|....+|..|+..
T Consensus 5 ~~~k~~~C~~--C~k~f~~~~~l~~H~~~ 31 (36)
T 2elv_A 5 SSGLLYDCHI--CERKFKNELDRDRHMLV 31 (36)
T ss_dssp CCCCCEECSS--SCCEESSHHHHHHHHTT
T ss_pred CCCCCeECCC--CCCccCCHHHHHHHHHH
Confidence 3456799875 99999999999999754
No 215
>2eos_A B-cell lymphoma 6 protein; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=74.15 E-value=0.75 Score=29.65 Aligned_cols=29 Identities=17% Similarity=0.352 Sum_probs=23.8
Q ss_pred eecCCcEEEecCCchhhhhcChhHHHHhhhh
Q 011117 116 IKLMEGIFICAAPHCLKSFLKKTEFEAHIHV 146 (493)
Q Consensus 116 i~p~esIFIC~~~gCkRtYLSqRDLQAHInh 146 (493)
++..+..|.|.. |.|.|.+..+|+.|++.
T Consensus 5 ~H~~~k~~~C~~--C~k~f~~~~~L~~H~~~ 33 (42)
T 2eos_A 5 SSGGEKPYPCEI--CGTRFRHLQTLKSHLRI 33 (42)
T ss_dssp CCSSSCCBCCSS--SCCCBSSHHHHHHHTTT
T ss_pred ccCCCCCEECCC--CCCccCCHHHHHHHHHh
Confidence 455567889864 99999999999999764
No 216
>2ene_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=74.14 E-value=1.1 Score=29.41 Aligned_cols=31 Identities=23% Similarity=0.396 Sum_probs=25.2
Q ss_pred eecCCcEEEecCCchhhhhcChhHHHHhhhhhhc
Q 011117 116 IKLMEGIFICAAPHCLKSFLKKTEFEAHIHVSHA 149 (493)
Q Consensus 116 i~p~esIFIC~~~gCkRtYLSqRDLQAHInhrH~ 149 (493)
++..+..|.|.. |.|.|.+..+|+.|++. |.
T Consensus 6 ~H~~~k~~~C~~--C~k~f~~~~~L~~H~~~-H~ 36 (46)
T 2ene_A 6 SGTGEKPYKCNE--CGKVFRHNSYLSRHQRI-HT 36 (46)
T ss_dssp SCCCSSSEECSS--SCCEESSHHHHHHHHTT-TC
T ss_pred CCCCCCCeECCC--CCchhCChHHHHHHHhh-cC
Confidence 455677899875 99999999999999864 53
No 217
>2eor_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=74.09 E-value=1.2 Score=29.09 Aligned_cols=29 Identities=21% Similarity=0.495 Sum_probs=23.9
Q ss_pred eecCCcEEEecCCchhhhhcChhHHHHhhhh
Q 011117 116 IKLMEGIFICAAPHCLKSFLKKTEFEAHIHV 146 (493)
Q Consensus 116 i~p~esIFIC~~~gCkRtYLSqRDLQAHInh 146 (493)
++..+..|.|.. |.|.|.+..+|+.|++.
T Consensus 6 ~H~~~~~~~C~~--C~k~f~~~~~L~~H~~~ 34 (46)
T 2eor_A 6 SGTGEKPYNCEE--CGKAFIHDSQLQEHQRI 34 (46)
T ss_dssp SSSCCCSEECTT--TCCEESSHHHHHHHHHH
T ss_pred CcCCCcCccCCC--CCCCcCCHHHHHHHHHh
Confidence 445567899864 99999999999999764
No 218
>2yu8_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=74.01 E-value=1.1 Score=29.33 Aligned_cols=31 Identities=26% Similarity=0.444 Sum_probs=25.2
Q ss_pred eecCCcEEEecCCchhhhhcChhHHHHhhhhhhc
Q 011117 116 IKLMEGIFICAAPHCLKSFLKKTEFEAHIHVSHA 149 (493)
Q Consensus 116 i~p~esIFIC~~~gCkRtYLSqRDLQAHInhrH~ 149 (493)
++..+..|.|.. |.|.|.+..+|+.|++. |.
T Consensus 6 ~H~~~k~~~C~~--C~k~f~~~~~L~~H~~~-H~ 36 (46)
T 2yu8_A 6 SGTGEKPYKCNE--CGKVFTQNSHLARHRRV-HT 36 (46)
T ss_dssp CCCCCSSEECSS--SCCEESSSHHHHHHTHH-HH
T ss_pred CCCCCCCeECCc--CCchhCCHHHHHHHHHh-cC
Confidence 455677899875 99999999999999764 43
No 219
>2eq4_A Zinc finger protein 224; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=73.81 E-value=0.98 Score=29.54 Aligned_cols=29 Identities=24% Similarity=0.372 Sum_probs=24.2
Q ss_pred eecCCcEEEecCCchhhhhcChhHHHHhhhh
Q 011117 116 IKLMEGIFICAAPHCLKSFLKKTEFEAHIHV 146 (493)
Q Consensus 116 i~p~esIFIC~~~gCkRtYLSqRDLQAHInh 146 (493)
++..+..|.|.. |.|+|.+..+|..|++.
T Consensus 6 ~H~~~k~~~C~~--C~k~f~~~~~L~~H~~~ 34 (46)
T 2eq4_A 6 SGTGEKLYNCKE--CGKSFSRAPCLLKHERL 34 (46)
T ss_dssp CSSCCCCCCBTT--TTBCCSCHHHHHHHHHH
T ss_pred cCCCCCCeECCC--CCCccCchHHHHHHHHh
Confidence 455677899875 99999999999999864
No 220
>2cup_A Skeletal muscle LIM-protein 1; four and half LIM domains protein 1, LIM domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.39.1.3 g.39.1.3 g.39.1.3
Probab=73.75 E-value=1.8 Score=34.03 Aligned_cols=55 Identities=18% Similarity=0.394 Sum_probs=36.3
Q ss_pred cccccCCCccccccccccccccccchhhhhC--CCCcccchHhHhhh-eeeecCCcEE
Q 011117 69 VHFCVRCDYPIAIYGRLNPCEHVFCLDCARS--DSMCYLCDERIQKI-QTIKLMEGIF 123 (493)
Q Consensus 69 vhFCdICdlPI~iygRmIPCKHVFCydCA~s--DktCP~Cna~VqrI-Eri~p~esIF 123 (493)
=+.|..|+.+|..-.-..-=..+||..|+.. ..+|..|+..|..- ..+..++.+|
T Consensus 33 CF~C~~C~~~L~~~~~~~~~g~~yC~~cy~~~~~~~C~~C~~~I~~~~~~~~a~~~~~ 90 (101)
T 2cup_A 33 CFRCAKCLHPLANETFVAKDNKILCNKCTTREDSPKCKGCFKAIVAGDQNVEYKGTVW 90 (101)
T ss_dssp TCCCSSSCCCTTSSCCEEETTEEECHHHHTTCCCCBCSSSCCBCCSSSCEEESSSCEE
T ss_pred CCcccccCCCCCcCeeECcCCEEEChhHhhhhcCCccccCCCccccCCeEEEeCCcch
Confidence 3679999988854211111256799999984 37899999999732 2344556665
No 221
>2emm_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=73.51 E-value=1.3 Score=29.01 Aligned_cols=31 Identities=26% Similarity=0.428 Sum_probs=25.0
Q ss_pred eecCCcEEEecCCchhhhhcChhHHHHhhhhhhc
Q 011117 116 IKLMEGIFICAAPHCLKSFLKKTEFEAHIHVSHA 149 (493)
Q Consensus 116 i~p~esIFIC~~~gCkRtYLSqRDLQAHInhrH~ 149 (493)
++..+..|.|.. |.|.|.+..+|..|++. |.
T Consensus 6 ~H~~~k~~~C~~--C~k~f~~~~~L~~H~~~-H~ 36 (46)
T 2emm_A 6 SGTGERPHKCNE--CGKSFIQSAHLIQHQRI-HT 36 (46)
T ss_dssp CSSCCCSEECSS--SCCEESSHHHHHHHHHH-HS
T ss_pred CcCCCCCeeCCC--CChhhCCHHHHHHHHHH-hC
Confidence 455667899865 99999999999999764 53
No 222
>2epz_A Zinc finger protein 28 homolog; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=73.43 E-value=0.81 Score=30.06 Aligned_cols=29 Identities=24% Similarity=0.367 Sum_probs=23.9
Q ss_pred eecCCcEEEecCCchhhhhcChhHHHHhhhh
Q 011117 116 IKLMEGIFICAAPHCLKSFLKKTEFEAHIHV 146 (493)
Q Consensus 116 i~p~esIFIC~~~gCkRtYLSqRDLQAHInh 146 (493)
++..+..|.|.. |.|.|.+..+|+.|++.
T Consensus 6 ~H~~~k~~~C~~--C~k~f~~~~~L~~H~~~ 34 (46)
T 2epz_A 6 SGTGEKPFDCID--CGKAFSDHIGLNQHRRI 34 (46)
T ss_dssp SCCCCCSBCCTT--TCCCBSSHHHHHHHHTT
T ss_pred CcCCCCCeECCC--CCceeCCHHHHHHHHHH
Confidence 455567789875 99999999999999864
No 223
>2eoe_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=73.39 E-value=1.1 Score=29.32 Aligned_cols=31 Identities=23% Similarity=0.449 Sum_probs=24.9
Q ss_pred eecCCcEEEecCCchhhhhcChhHHHHhhhhhhc
Q 011117 116 IKLMEGIFICAAPHCLKSFLKKTEFEAHIHVSHA 149 (493)
Q Consensus 116 i~p~esIFIC~~~gCkRtYLSqRDLQAHInhrH~ 149 (493)
++..+.-|.|.. |.|.|.+..+|+.|++. |.
T Consensus 6 ~H~~~~~~~C~~--C~k~F~~~~~L~~H~~~-H~ 36 (46)
T 2eoe_A 6 SGTGEKPYKCNE--CGKVFTQNSHLANHQRI-HT 36 (46)
T ss_dssp CCCCCCSSEETT--TTEECSSHHHHHHHHGG-GS
T ss_pred CCCCCCCeECCC--cChhhCCHHHHHHHHHH-cC
Confidence 455567799875 99999999999999854 53
No 224
>2eoy_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=73.12 E-value=1.3 Score=29.18 Aligned_cols=31 Identities=26% Similarity=0.426 Sum_probs=25.0
Q ss_pred eecCCcEEEecCCchhhhhcChhHHHHhhhhhhc
Q 011117 116 IKLMEGIFICAAPHCLKSFLKKTEFEAHIHVSHA 149 (493)
Q Consensus 116 i~p~esIFIC~~~gCkRtYLSqRDLQAHInhrH~ 149 (493)
++..+..|.|.. |.|+|.....|+.|++. |.
T Consensus 6 ~H~~~k~~~C~~--C~k~f~~~~~L~~H~~~-H~ 36 (46)
T 2eoy_A 6 SGQKEKCFKCNK--CEKTFSCSKYLTQHERI-HT 36 (46)
T ss_dssp CCCCSCCEECSS--SCCEESSSHHHHHHHTT-CC
T ss_pred ccCCCCCEECcC--CCCcCCCHHHHHHHHHH-cC
Confidence 455667899876 99999999999999753 54
No 225
>2ytg_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=72.98 E-value=1.1 Score=29.39 Aligned_cols=29 Identities=28% Similarity=0.439 Sum_probs=24.1
Q ss_pred eecCCcEEEecCCchhhhhcChhHHHHhhhh
Q 011117 116 IKLMEGIFICAAPHCLKSFLKKTEFEAHIHV 146 (493)
Q Consensus 116 i~p~esIFIC~~~gCkRtYLSqRDLQAHInh 146 (493)
++..+..|.|.. |.|+|.+..+|..|++.
T Consensus 6 ~H~~~~~~~C~~--C~k~f~~~~~L~~H~~~ 34 (46)
T 2ytg_A 6 SGTGEKPFKCGE--CGKSYNQRVHLTQHQRV 34 (46)
T ss_dssp CCSSCCSEECTT--TCCEESSSHHHHTTGGG
T ss_pred CCCCCCCeECCC--CCcccCCHHHHHHHHHH
Confidence 455677899865 99999999999999754
No 226
>2enf_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=72.98 E-value=0.87 Score=29.90 Aligned_cols=31 Identities=23% Similarity=0.399 Sum_probs=24.7
Q ss_pred eecCCcEEEecCCchhhhhcChhHHHHhhhhhhc
Q 011117 116 IKLMEGIFICAAPHCLKSFLKKTEFEAHIHVSHA 149 (493)
Q Consensus 116 i~p~esIFIC~~~gCkRtYLSqRDLQAHInhrH~ 149 (493)
++..+..|.|.. |.|.|.+..+|..|++. |.
T Consensus 6 ~H~~~k~~~C~~--C~k~F~~~~~L~~H~~~-H~ 36 (46)
T 2enf_A 6 SGTGEKPYKCNE--CGKVFTQNSHLVRHRGI-HT 36 (46)
T ss_dssp CCCCCCSCBCSS--SCCBCSSHHHHHHHHTT-TT
T ss_pred CCCCCcCeECCC--CCcccCCHHHHHHHHHh-hC
Confidence 455677899865 99999999999999753 43
No 227
>2eq0_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=72.89 E-value=1.4 Score=28.91 Aligned_cols=31 Identities=23% Similarity=0.417 Sum_probs=25.1
Q ss_pred eecCCcEEEecCCchhhhhcChhHHHHhhhhhhc
Q 011117 116 IKLMEGIFICAAPHCLKSFLKKTEFEAHIHVSHA 149 (493)
Q Consensus 116 i~p~esIFIC~~~gCkRtYLSqRDLQAHInhrH~ 149 (493)
++..+.-|.|.. |.|+|.+..+|..|++. |.
T Consensus 6 ~H~~~k~~~C~~--C~k~F~~~~~L~~H~~~-H~ 36 (46)
T 2eq0_A 6 SGTGEKPYKCHE--CGKVFRRNSHLARHQLI-HT 36 (46)
T ss_dssp CTTCCCCEECTT--TCCEESSHHHHHHHHTT-TC
T ss_pred CCCCCCCeECCC--CCchhCCHHHHHHHHHH-cC
Confidence 455677899875 99999999999999764 54
No 228
>2eme_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=72.83 E-value=1.2 Score=29.06 Aligned_cols=31 Identities=26% Similarity=0.365 Sum_probs=24.9
Q ss_pred eecCCcEEEecCCchhhhhcChhHHHHhhhhhhc
Q 011117 116 IKLMEGIFICAAPHCLKSFLKKTEFEAHIHVSHA 149 (493)
Q Consensus 116 i~p~esIFIC~~~gCkRtYLSqRDLQAHInhrH~ 149 (493)
++..+..|.|.. |.|.|.+..+|..|++ .|.
T Consensus 6 ~H~~~k~~~C~~--C~k~f~~~~~L~~H~~-~H~ 36 (46)
T 2eme_A 6 SGSGEKPYVCDY--CGKAFGLSAELVRHQR-IHT 36 (46)
T ss_dssp TTCCCCSEECSS--SCCEESSHHHHHHHHG-GGC
T ss_pred CCCCCCCeECCC--CChhhCCHHHHHHHHH-hcC
Confidence 445567799876 9999999999999985 353
No 229
>2ytb_A Zinc finger protein 32; zinc-finger domain, C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=72.81 E-value=0.84 Score=29.18 Aligned_cols=29 Identities=31% Similarity=0.432 Sum_probs=23.9
Q ss_pred eecCCcEEEecCCchhhhhcChhHHHHhhhh
Q 011117 116 IKLMEGIFICAAPHCLKSFLKKTEFEAHIHV 146 (493)
Q Consensus 116 i~p~esIFIC~~~gCkRtYLSqRDLQAHInh 146 (493)
++..+..|.|.. |.|+|.+..+|..|++.
T Consensus 5 ~H~~~k~~~C~~--C~k~f~~~~~L~~H~~~ 33 (42)
T 2ytb_A 5 SSGGEKPYRCDQ--CGKAFSQKGSLIVHIRV 33 (42)
T ss_dssp CCCSCCSBCCTT--TTCCBSSHHHHHTTGGG
T ss_pred ccCCCCCeeCCC--ccchhCCHHHHHHHHHH
Confidence 455667889875 99999999999999754
No 230
>2enh_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=72.79 E-value=0.96 Score=29.81 Aligned_cols=31 Identities=26% Similarity=0.467 Sum_probs=24.7
Q ss_pred eecCCcEEEecCCchhhhhcChhHHHHhhhhhhc
Q 011117 116 IKLMEGIFICAAPHCLKSFLKKTEFEAHIHVSHA 149 (493)
Q Consensus 116 i~p~esIFIC~~~gCkRtYLSqRDLQAHInhrH~ 149 (493)
++..+.-|.|.. |.|.|....+|+.|++. |.
T Consensus 6 ~h~~~k~~~C~~--C~k~F~~~~~L~~H~~~-H~ 36 (46)
T 2enh_A 6 SGTGEKPYECDV--CRKAFSHHASLTQHQRV-HS 36 (46)
T ss_dssp CCCCSSSCBCTT--TCCBCSSSHHHHHHGGG-SC
T ss_pred CcCCCCCcCCCC--cCchhCCHHHHHHHHHH-hC
Confidence 455567788865 99999999999999764 53
No 231
>2lt7_A Transcriptional regulator kaiso; zinc finger, double helix, metal binding protein-DNA complex; HET: DNA; NMR {Homo sapiens} PDB: 4f6m_A* 4f6n_A*
Probab=72.79 E-value=1.6 Score=36.53 Aligned_cols=26 Identities=23% Similarity=0.245 Sum_probs=11.8
Q ss_pred ecCCcEEEecCCchhhhhcChhHHHHhh
Q 011117 117 KLMEGIFICAAPHCLKSFLKKTEFEAHI 144 (493)
Q Consensus 117 ~p~esIFIC~~~gCkRtYLSqRDLQAHI 144 (493)
+..+..|.|.. |.++|.+..+|..|+
T Consensus 45 H~~~k~~~C~~--C~k~F~~~~~L~~H~ 70 (133)
T 2lt7_A 45 HSWEKKYPCRY--CEKVFPLAEYRTKHE 70 (133)
T ss_dssp HHCCSCEECSS--SSCEESSHHHHHHHH
T ss_pred cCCCCCeeCCc--cCeecccccchhhhc
Confidence 33344444432 445555555555544
No 232
>2ema_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2emc_A
Probab=72.73 E-value=1.6 Score=28.62 Aligned_cols=31 Identities=23% Similarity=0.473 Sum_probs=25.3
Q ss_pred eecCCcEEEecCCchhhhhcChhHHHHhhhhhhc
Q 011117 116 IKLMEGIFICAAPHCLKSFLKKTEFEAHIHVSHA 149 (493)
Q Consensus 116 i~p~esIFIC~~~gCkRtYLSqRDLQAHInhrH~ 149 (493)
++..+..|.|.. |.|+|....+|+.|++. |.
T Consensus 6 ~H~~~k~~~C~~--C~k~f~~~~~L~~H~~~-H~ 36 (46)
T 2ema_A 6 SGTGEKRYKCNE--CGKVFSRNSQLSQHQKI-HT 36 (46)
T ss_dssp SCTTSCCEECSS--SCCEESSHHHHHHHHTG-GG
T ss_pred CCCCCcCcCCCC--CcchhCCHHHHHHHHHh-cC
Confidence 455677899875 99999999999999765 43
No 233
>2eq3_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=72.63 E-value=1.1 Score=29.31 Aligned_cols=29 Identities=21% Similarity=0.386 Sum_probs=23.9
Q ss_pred eecCCcEEEecCCchhhhhcChhHHHHhhhh
Q 011117 116 IKLMEGIFICAAPHCLKSFLKKTEFEAHIHV 146 (493)
Q Consensus 116 i~p~esIFIC~~~gCkRtYLSqRDLQAHInh 146 (493)
++..+..|.|.. |.|.|.+..+|..|++.
T Consensus 6 ~H~~~k~~~C~~--C~k~f~~~~~L~~H~~~ 34 (46)
T 2eq3_A 6 SGTGEKPYECNQ--CGKAFSVRSSLTTHQAI 34 (46)
T ss_dssp SSCCCCSSEETT--TTEECSSHHHHHHHHTT
T ss_pred CCCCCCCeECCC--CChhhCCHHHHHHHHHH
Confidence 455567899864 99999999999999764
No 234
>2ytn_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=72.44 E-value=1 Score=29.59 Aligned_cols=29 Identities=17% Similarity=0.345 Sum_probs=24.0
Q ss_pred eecCCcEEEecCCchhhhhcChhHHHHhhhh
Q 011117 116 IKLMEGIFICAAPHCLKSFLKKTEFEAHIHV 146 (493)
Q Consensus 116 i~p~esIFIC~~~gCkRtYLSqRDLQAHInh 146 (493)
++..+..|.|.. |.|.|.+..+|+.|++.
T Consensus 6 ~H~~~k~~~C~~--C~k~F~~~~~L~~H~~~ 34 (46)
T 2ytn_A 6 SGTGKKPYKCNE--CGKVFTQNSHLARHRGI 34 (46)
T ss_dssp CCSCCSSCBCTT--TCCBCSSHHHHHHHGGG
T ss_pred CCCCCcCeECCC--CCCeeCCHHHHHHHhhh
Confidence 455677899875 99999999999999754
No 235
>2emb_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=72.43 E-value=1.5 Score=28.52 Aligned_cols=31 Identities=19% Similarity=0.382 Sum_probs=24.9
Q ss_pred eecCCcEEEecCCchhhhhcChhHHHHhhhhhhc
Q 011117 116 IKLMEGIFICAAPHCLKSFLKKTEFEAHIHVSHA 149 (493)
Q Consensus 116 i~p~esIFIC~~~gCkRtYLSqRDLQAHInhrH~ 149 (493)
++..+..|.|. .|.|+|.+..+|+.|++. |.
T Consensus 6 ~H~~~k~~~C~--~C~k~f~~~~~L~~H~~~-H~ 36 (44)
T 2emb_A 6 SGHTRKRYECS--KCQATFNLRKHLIQHQKT-HA 36 (44)
T ss_dssp CCCCCSSEECT--TTCCEESCHHHHHHHGGG-GC
T ss_pred ccCCCCCeECC--CCCCccCCHHHHHHHHHH-cC
Confidence 45566789986 599999999999999863 53
No 236
>1klr_A Zinc finger Y-chromosomal protein; transcription; NMR {Synthetic} SCOP: g.37.1.1 PDB: 5znf_A 1kls_A 1xrz_A* 7znf_A
Probab=72.27 E-value=0.91 Score=26.26 Aligned_cols=24 Identities=21% Similarity=0.515 Sum_probs=19.3
Q ss_pred EEecCCchhhhhcChhHHHHhhhhhh
Q 011117 123 FICAAPHCLKSFLKKTEFEAHIHVSH 148 (493)
Q Consensus 123 FIC~~~gCkRtYLSqRDLQAHInhrH 148 (493)
|.|. .|.+.|.+..+|..|++..|
T Consensus 3 ~~C~--~C~k~f~~~~~l~~H~~~h~ 26 (30)
T 1klr_A 3 YQCQ--YCEFRSADSSNLKTHIKTKH 26 (30)
T ss_dssp CCCS--SSSCCCSCSHHHHHHHHHHT
T ss_pred ccCC--CCCCccCCHHHHHHHHHHHc
Confidence 4554 49999999999999987544
No 237
>2ely_A Zinc finger protein 224; DNA-binding, metal-binding, nuclear protein, phosphorylation, polymorphism, repeat, repressor, transcription; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2ena_A 2en4_A
Probab=72.03 E-value=0.9 Score=29.95 Aligned_cols=32 Identities=25% Similarity=0.506 Sum_probs=25.6
Q ss_pred eeecCCcEEEecCCchhhhhcChhHHHHhhhhhhc
Q 011117 115 TIKLMEGIFICAAPHCLKSFLKKTEFEAHIHVSHA 149 (493)
Q Consensus 115 ri~p~esIFIC~~~gCkRtYLSqRDLQAHInhrH~ 149 (493)
+++..+..|.|.. |.|+|.+..+|..|++. |.
T Consensus 5 ~~H~~~k~~~C~~--C~k~f~~~~~L~~H~~~-H~ 36 (46)
T 2ely_A 5 SSGTGEKPFKCVE--CGKGFSRRSALNVHHKL-HT 36 (46)
T ss_dssp CCCCCCCSBCCSS--SCCCBSSTTHHHHHHHH-HS
T ss_pred CCCCCCCCcccCc--cCcccCCHHHHHHHHHH-cC
Confidence 3455677899875 99999999999999864 54
No 238
>2yso_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=72.00 E-value=1.6 Score=28.54 Aligned_cols=30 Identities=17% Similarity=0.254 Sum_probs=24.7
Q ss_pred eeecCCcEEEecCCchhhhhcChhHHHHhhhh
Q 011117 115 TIKLMEGIFICAAPHCLKSFLKKTEFEAHIHV 146 (493)
Q Consensus 115 ri~p~esIFIC~~~gCkRtYLSqRDLQAHInh 146 (493)
+++..+..|.|.. |.|.|.+..+|..|++.
T Consensus 5 ~~H~~~~~~~C~~--C~k~f~~~~~L~~H~~~ 34 (46)
T 2yso_A 5 SSGSREKSHQCRE--CGEIFFQYVSLIEHQVL 34 (46)
T ss_dssp CCSSCCCCEECTT--TCCEESSHHHHHHHHHH
T ss_pred cccCCCCCEEccc--cChhhCCHHHHHHHHHH
Confidence 3455677899875 99999999999999764
No 239
>2enc_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=71.89 E-value=1.5 Score=28.78 Aligned_cols=31 Identities=26% Similarity=0.410 Sum_probs=25.0
Q ss_pred eecCCcEEEecCCchhhhhcChhHHHHhhhhhhc
Q 011117 116 IKLMEGIFICAAPHCLKSFLKKTEFEAHIHVSHA 149 (493)
Q Consensus 116 i~p~esIFIC~~~gCkRtYLSqRDLQAHInhrH~ 149 (493)
++..+.-|.|.. |.|.|.+..+|+.|++. |.
T Consensus 6 ~H~~~k~~~C~~--C~k~f~~~~~L~~H~~~-H~ 36 (46)
T 2enc_A 6 SGSGEKPFKCEE--CGKGFYTNSQCYSHQRS-HS 36 (46)
T ss_dssp CCCCCCSEECSS--SCCEESSHHHHHHHHHH-SC
T ss_pred CCCCCCCcCCCC--CCCcCCChHHHHHHHHH-hC
Confidence 455667899865 99999999999999764 53
No 240
>2ytd_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=71.71 E-value=1.5 Score=28.71 Aligned_cols=31 Identities=26% Similarity=0.501 Sum_probs=25.0
Q ss_pred eecCCcEEEecCCchhhhhcChhHHHHhhhhhhc
Q 011117 116 IKLMEGIFICAAPHCLKSFLKKTEFEAHIHVSHA 149 (493)
Q Consensus 116 i~p~esIFIC~~~gCkRtYLSqRDLQAHInhrH~ 149 (493)
++..+.-|.|.. |.|.|.+..+|..|++. |.
T Consensus 6 ~H~~~k~~~C~~--C~k~f~~~~~L~~H~~~-H~ 36 (46)
T 2ytd_A 6 SGSGEKPYKCSE--CGKAFHRHTHLNEHRRI-HT 36 (46)
T ss_dssp CSCCCCSEECSS--SCCEESSHHHHHHHHHH-HT
T ss_pred ccCCCcCeECCC--CCCeeCChHHHHHHHHH-cC
Confidence 455567899876 99999999999999754 43
No 241
>2eoq_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=71.61 E-value=0.94 Score=29.75 Aligned_cols=31 Identities=32% Similarity=0.476 Sum_probs=24.9
Q ss_pred eecCCcEEEecCCchhhhhcChhHHHHhhhhhhc
Q 011117 116 IKLMEGIFICAAPHCLKSFLKKTEFEAHIHVSHA 149 (493)
Q Consensus 116 i~p~esIFIC~~~gCkRtYLSqRDLQAHInhrH~ 149 (493)
++..+..|.|.. |.|+|.+..+|..|++. |.
T Consensus 6 ~H~~~~~~~C~~--C~k~f~~~~~L~~H~~~-H~ 36 (46)
T 2eoq_A 6 SGTGEKPFKCDI--CGKSFCGRSRLNRHSMV-HT 36 (46)
T ss_dssp CSSSSCSCCCSS--SCCCCSSHHHHHHHHHH-TT
T ss_pred CCCCCCCcCCCc--CCchhCCHHHHHHHHHH-cC
Confidence 455567788876 99999999999999764 53
No 242
>1njq_A Superman protein; zinc-finger, peptide-zinc complex, beta-BETA-ALFA motif, metal binding protein; NMR {Synthetic} SCOP: g.37.1.3 PDB: 2l1o_A
Probab=71.13 E-value=1.7 Score=27.62 Aligned_cols=25 Identities=20% Similarity=0.575 Sum_probs=21.2
Q ss_pred CcEEEecCCchhhhhcChhHHHHhhhh
Q 011117 120 EGIFICAAPHCLKSFLKKTEFEAHIHV 146 (493)
Q Consensus 120 esIFIC~~~gCkRtYLSqRDLQAHInh 146 (493)
+.-|.|.. |.|.|.+...|..|++.
T Consensus 4 ~k~~~C~~--C~k~f~~~~~L~~H~~~ 28 (39)
T 1njq_A 4 PRSYTCSF--CKREFRSAQALGGHMNV 28 (39)
T ss_dssp SSSEECTT--TCCEESSHHHHHHHHHT
T ss_pred CCceECCC--CCcccCCHHHHHHHHHH
Confidence 45688876 99999999999999764
No 243
>2xjy_A Rhombotin-2; oncoprotein, T-cell leukemia, proto-oncogene, transcription, developmental protein; 2.40A {Homo sapiens} PDB: 2xjz_A
Probab=71.12 E-value=1.4 Score=36.20 Aligned_cols=52 Identities=17% Similarity=0.383 Sum_probs=35.8
Q ss_pred ccccCCCcccc----ccccccccccccchhhhhC--CC--CcccchHhHhhhe-eeecCCcEE
Q 011117 70 HFCVRCDYPIA----IYGRLNPCEHVFCLDCARS--DS--MCYLCDERIQKIQ-TIKLMEGIF 123 (493)
Q Consensus 70 hFCdICdlPI~----iygRmIPCKHVFCydCA~s--Dk--tCP~Cna~VqrIE-ri~p~esIF 123 (493)
+.|..|+.+|. .++..- ...||..|+.. .. +|..|+..|...| .+...+.+|
T Consensus 30 F~C~~C~~~L~~~~~~~~~~~--g~~yC~~~y~~~~~~~~~C~~C~~~I~~~e~~~~a~~~~~ 90 (131)
T 2xjy_A 30 LSCDLCGCRLGEVGRRLYYKL--GRKLCRRDYLRLFGQDGLCASCDKRIRAYEMTMRVKDKVY 90 (131)
T ss_dssp CBCTTTCCBCSSTTCCEEEET--TEEECHHHHHHHHCCCEECTTTCCEECTTSEEEEETTEEE
T ss_pred cccCcCCCccccCCCeEEEEC--CEEeecCchhhhCCCccChhhcCCccCccceeEeeCCceE
Confidence 67899998884 233222 56799999972 33 8999999997654 334456666
No 244
>1paa_A Yeast transcription factor ADR1; transcription regulation; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1
Probab=70.84 E-value=0.92 Score=26.58 Aligned_cols=25 Identities=20% Similarity=0.583 Sum_probs=19.4
Q ss_pred EEecCCchhhhhcChhHHHHhhhhhhc
Q 011117 123 FICAAPHCLKSFLKKTEFEAHIHVSHA 149 (493)
Q Consensus 123 FIC~~~gCkRtYLSqRDLQAHInhrH~ 149 (493)
|.|. .|.+.|.+...|..|+...|.
T Consensus 3 ~~C~--~C~k~f~~~~~l~~H~~~~H~ 27 (30)
T 1paa_A 3 YACG--LCNRAFTRRDLLIRHAQKIHS 27 (30)
T ss_dssp SBCT--TTCCBCSSSHHHHHHHTTTSC
T ss_pred cCCc--ccCcccCChHHHHHHHHHHcc
Confidence 4453 599999999999999655564
No 245
>1x6e_A Zinc finger protein 24; ZNF24, KOX17, ZNF191, zscan3, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1
Probab=70.81 E-value=1.7 Score=31.19 Aligned_cols=30 Identities=27% Similarity=0.400 Sum_probs=25.2
Q ss_pred eeecCCcEEEecCCchhhhhcChhHHHHhhhh
Q 011117 115 TIKLMEGIFICAAPHCLKSFLKKTEFEAHIHV 146 (493)
Q Consensus 115 ri~p~esIFIC~~~gCkRtYLSqRDLQAHInh 146 (493)
+++..+..|.|.. |.|.|.+..+|+.|++.
T Consensus 7 ~~H~~~k~~~C~~--C~k~f~~~~~L~~H~~~ 36 (72)
T 1x6e_A 7 GIHSGEKPYGCVE--CGKAFSRSSILVQHQRV 36 (72)
T ss_dssp CTTTTCCCEECSS--SCCEESSHHHHHHHHHG
T ss_pred cccCCCCCccCCC--CCCccCCHHHHHHHHHh
Confidence 3456677899965 99999999999999875
No 246
>2en7_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=70.80 E-value=0.89 Score=29.36 Aligned_cols=29 Identities=21% Similarity=0.332 Sum_probs=23.7
Q ss_pred eecCCcEEEecCCchhhhhcChhHHHHhhhh
Q 011117 116 IKLMEGIFICAAPHCLKSFLKKTEFEAHIHV 146 (493)
Q Consensus 116 i~p~esIFIC~~~gCkRtYLSqRDLQAHInh 146 (493)
++..+..|.|.. |.|+|.+..+|..|++.
T Consensus 6 ~H~~~k~~~C~~--C~k~f~~~~~L~~H~~~ 34 (44)
T 2en7_A 6 SGTGMKPYVCNE--CGKAFRSKSYLIIHTRT 34 (44)
T ss_dssp CSSSSSSSCCTT--TCCCCSSHHHHHHHHTT
T ss_pred CCCCCcCeECCC--CCCccCCHHHHHHHhhh
Confidence 455567788875 99999999999999853
No 247
>2eov_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=70.76 E-value=1.1 Score=29.26 Aligned_cols=31 Identities=29% Similarity=0.433 Sum_probs=24.6
Q ss_pred eecCCcEEEecCCchhhhhcChhHHHHhhhhhhc
Q 011117 116 IKLMEGIFICAAPHCLKSFLKKTEFEAHIHVSHA 149 (493)
Q Consensus 116 i~p~esIFIC~~~gCkRtYLSqRDLQAHInhrH~ 149 (493)
++..+..|.|.. |.|+|.+..+|+.|++. |.
T Consensus 6 ~H~~~~~~~C~~--C~k~f~~~~~L~~H~~~-H~ 36 (46)
T 2eov_A 6 SGTGEKPYKCSD--CGKSFTWKSRLRIHQKC-HT 36 (46)
T ss_dssp CCSSCCSCBCSS--SCCBCSSHHHHHHHHHH-HS
T ss_pred CCCCCCCccCCc--cChhhCCHHHHHHHHHh-cC
Confidence 455567799865 99999999999999754 53
No 248
>2lvr_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc finger, classical zinc finger, transcription; NMR {Homo sapiens}
Probab=73.49 E-value=0.87 Score=26.58 Aligned_cols=23 Identities=22% Similarity=0.805 Sum_probs=19.2
Q ss_pred EEEecCCchhhhhcChhHHHHhhhh
Q 011117 122 IFICAAPHCLKSFLKKTEFEAHIHV 146 (493)
Q Consensus 122 IFIC~~~gCkRtYLSqRDLQAHInh 146 (493)
.|.|. .|.|.|.+..+|+.|++.
T Consensus 3 ~~~C~--~C~k~f~~~~~l~~H~~~ 25 (30)
T 2lvr_A 3 PYVCI--HCQRQFADPGALQRHVRI 25 (30)
Confidence 47775 499999999999999764
No 249
>1znf_A 31ST zinc finger from XFIN; zinc finger DNA binding domain; NMR {Xenopus laevis} SCOP: g.37.1.1
Probab=70.75 E-value=1.2 Score=25.54 Aligned_cols=22 Identities=32% Similarity=0.774 Sum_probs=17.9
Q ss_pred EEecCCchhhhhcChhHHHHhhhh
Q 011117 123 FICAAPHCLKSFLKKTEFEAHIHV 146 (493)
Q Consensus 123 FIC~~~gCkRtYLSqRDLQAHInh 146 (493)
|.|. .|.|+|.+..+|..|++.
T Consensus 2 ~~C~--~C~k~f~~~~~l~~H~~~ 23 (27)
T 1znf_A 2 YKCG--LCERSFVEKSALSRHQRV 23 (27)
T ss_dssp CBCS--SSCCBCSSHHHHHHHGGG
T ss_pred ccCC--CCCCcCCCHHHHHHHHHH
Confidence 4454 499999999999999754
No 250
>2eq2_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=70.44 E-value=0.81 Score=30.06 Aligned_cols=31 Identities=23% Similarity=0.419 Sum_probs=24.7
Q ss_pred eecCCcEEEecCCchhhhhcChhHHHHhhhhhhc
Q 011117 116 IKLMEGIFICAAPHCLKSFLKKTEFEAHIHVSHA 149 (493)
Q Consensus 116 i~p~esIFIC~~~gCkRtYLSqRDLQAHInhrH~ 149 (493)
++..+..|.|.. |.|+|.+..+|+.|++. |.
T Consensus 6 ~H~~~k~~~C~~--C~k~f~~~~~L~~H~~~-H~ 36 (46)
T 2eq2_A 6 SGTGGKPYQCNE--CGKAFSQTSKLARHQRV-HT 36 (46)
T ss_dssp SSSSSCSSSCCS--SCCCCSSHHHHHHHGGG-GC
T ss_pred ccCCCCCeECCC--CCcccCCHHHHHHHHHH-cC
Confidence 455567788865 99999999999999854 54
No 251
>2eop_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=70.32 E-value=1.1 Score=29.28 Aligned_cols=31 Identities=26% Similarity=0.348 Sum_probs=24.8
Q ss_pred eecCCcEEEecCCchhhhhcChhHHHHhhhhhhc
Q 011117 116 IKLMEGIFICAAPHCLKSFLKKTEFEAHIHVSHA 149 (493)
Q Consensus 116 i~p~esIFIC~~~gCkRtYLSqRDLQAHInhrH~ 149 (493)
++..+.-|.|.. |.|+|.+..+|..|++. |.
T Consensus 6 ~H~~~~~~~C~~--C~k~f~~~~~L~~H~~~-H~ 36 (46)
T 2eop_A 6 SGTGEKPHECRE--CGKSFSFNSQLIVHQRI-HT 36 (46)
T ss_dssp SCCCCCSCBCTT--TCCBCSSHHHHHHHHTT-TT
T ss_pred ccCCCCCeeCCC--CCchhCCHHHHHHHHHH-cC
Confidence 455567788875 99999999999999765 54
No 252
>2emk_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2ysv_A
Probab=70.25 E-value=1.1 Score=29.47 Aligned_cols=31 Identities=29% Similarity=0.434 Sum_probs=24.8
Q ss_pred eecCCcEEEecCCchhhhhcChhHHHHhhhhhhc
Q 011117 116 IKLMEGIFICAAPHCLKSFLKKTEFEAHIHVSHA 149 (493)
Q Consensus 116 i~p~esIFIC~~~gCkRtYLSqRDLQAHInhrH~ 149 (493)
++..+..|.|.. |.|+|.+..+|+.|++. |.
T Consensus 6 ~H~~~k~~~C~~--C~k~F~~~~~L~~H~~~-H~ 36 (46)
T 2emk_A 6 SGTGEKPYECKE--CGKAFSQTTHLIQHQRV-HT 36 (46)
T ss_dssp CCSSSCSCBCSS--SCCBCSCHHHHHHHHHH-HS
T ss_pred ccCCCCceECCC--CCchhCCHHHHHHHHHH-cC
Confidence 455567799865 99999999999999864 53
No 253
>2kvf_A Zinc finger and BTB domain-containing protein 32; protein/DNA, metal-binding, transcription; NMR {Mus musculus}
Probab=70.18 E-value=1.6 Score=25.33 Aligned_cols=23 Identities=35% Similarity=0.637 Sum_probs=19.2
Q ss_pred EEEecCCchhhhhcChhHHHHhhhh
Q 011117 122 IFICAAPHCLKSFLKKTEFEAHIHV 146 (493)
Q Consensus 122 IFIC~~~gCkRtYLSqRDLQAHInh 146 (493)
.|.|. .|.|+|.+..+|..|+..
T Consensus 3 ~~~C~--~C~k~f~~~~~l~~H~~~ 25 (28)
T 2kvf_A 3 PYSCS--VCGKRFSLKHQMETHYRV 25 (28)
T ss_dssp SEECS--SSCCEESCHHHHHHHHTT
T ss_pred CccCC--CCCcccCCHHHHHHHHHh
Confidence 47775 599999999999999753
No 254
>2emz_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=70.14 E-value=1 Score=29.66 Aligned_cols=29 Identities=24% Similarity=0.482 Sum_probs=23.8
Q ss_pred eecCCcEEEecCCchhhhhcChhHHHHhhhh
Q 011117 116 IKLMEGIFICAAPHCLKSFLKKTEFEAHIHV 146 (493)
Q Consensus 116 i~p~esIFIC~~~gCkRtYLSqRDLQAHInh 146 (493)
++..+..|.|.. |.|.|....+|+.|++.
T Consensus 6 ~H~~~k~~~C~~--C~k~f~~~~~L~~H~~~ 34 (46)
T 2emz_A 6 SGSGERPFKCNE--CGKGFGRRSHLAGHLRL 34 (46)
T ss_dssp CSSCCCSCCCSS--SCCCCSSHHHHHHHHHH
T ss_pred CCCCCCCeECCC--CCcccCCHHHHHHHHHH
Confidence 455567788876 99999999999999764
No 255
>2eon_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=70.08 E-value=1 Score=29.83 Aligned_cols=31 Identities=26% Similarity=0.400 Sum_probs=24.8
Q ss_pred eecCCcEEEecCCchhhhhcChhHHHHhhhhhhc
Q 011117 116 IKLMEGIFICAAPHCLKSFLKKTEFEAHIHVSHA 149 (493)
Q Consensus 116 i~p~esIFIC~~~gCkRtYLSqRDLQAHInhrH~ 149 (493)
++..+.-|.|.. |.|.|.+..+|+.|++. |.
T Consensus 6 ~H~~~k~~~C~~--C~k~f~~~~~L~~H~~~-H~ 36 (46)
T 2eon_A 6 SGTGEKPYKCQV--CGKAFRVSSHLVQHHSV-HS 36 (46)
T ss_dssp SCSSCCSCBCSS--SCCBCSSHHHHHHHTTT-TT
T ss_pred CCCCCcccCCCC--CCcccCcHHHHHHHHHh-cC
Confidence 455567788875 99999999999999754 54
No 256
>2en8_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=69.97 E-value=1.8 Score=28.27 Aligned_cols=29 Identities=24% Similarity=0.309 Sum_probs=24.0
Q ss_pred eecCCcEEEecCCchhhhhcChhHHHHhhhh
Q 011117 116 IKLMEGIFICAAPHCLKSFLKKTEFEAHIHV 146 (493)
Q Consensus 116 i~p~esIFIC~~~gCkRtYLSqRDLQAHInh 146 (493)
++..+..|.|. .|.|+|.+..+|+.|+..
T Consensus 6 ~H~~~~~~~C~--~C~k~f~~~~~L~~H~~~ 34 (46)
T 2en8_A 6 SGSGEKSHTCD--ECGKNFCYISALRIHQRV 34 (46)
T ss_dssp CCCCCSSEECT--TTCCEESSHHHHHHHHTT
T ss_pred cCCCCCCeECC--CcCcccCCHHHHHHHHHH
Confidence 45567789986 599999999999999753
No 257
>2yth_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=69.80 E-value=1.1 Score=29.48 Aligned_cols=29 Identities=28% Similarity=0.456 Sum_probs=23.7
Q ss_pred eecCCcEEEecCCchhhhhcChhHHHHhhhh
Q 011117 116 IKLMEGIFICAAPHCLKSFLKKTEFEAHIHV 146 (493)
Q Consensus 116 i~p~esIFIC~~~gCkRtYLSqRDLQAHInh 146 (493)
++..+..|.|.. |.|.|.+..+|..|++.
T Consensus 6 ~H~~~k~~~C~~--C~k~f~~~~~L~~H~~~ 34 (46)
T 2yth_A 6 SGSGEKPFQCEE--CGKRFTQNSHLHSHQRV 34 (46)
T ss_dssp CCCCSSSBCCSS--SCCCBSSHHHHHHHGGG
T ss_pred CCCCCcCCCCCC--CCcccCCHHHHHHHHHh
Confidence 455567788865 99999999999999764
No 258
>2em0_A Zinc finger protein 224; DNA-binding, metal-binding, nuclear protein, phosphorylation, polymorphism, repeat, repressor, transcription; NMR {Homo sapiens}
Probab=69.80 E-value=1.3 Score=28.98 Aligned_cols=31 Identities=23% Similarity=0.442 Sum_probs=24.8
Q ss_pred eecCCcEEEecCCchhhhhcChhHHHHhhhhhhc
Q 011117 116 IKLMEGIFICAAPHCLKSFLKKTEFEAHIHVSHA 149 (493)
Q Consensus 116 i~p~esIFIC~~~gCkRtYLSqRDLQAHInhrH~ 149 (493)
++..+..|.|. .|.|.|....+|+.|++. |.
T Consensus 6 ~H~~~k~~~C~--~C~k~F~~~~~L~~H~~~-H~ 36 (46)
T 2em0_A 6 SGMGEKTWKCR--ECDMCFSQASSLRLHQNV-HV 36 (46)
T ss_dssp CSCCCCCCCCS--SSCCCCSSHHHHHHHGGG-GS
T ss_pred ccCCCcCeECC--CCCcccCCHHHHHHHHHH-cC
Confidence 45566778885 599999999999999865 53
No 259
>2ytt_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=69.60 E-value=0.81 Score=30.17 Aligned_cols=30 Identities=23% Similarity=0.302 Sum_probs=24.2
Q ss_pred eeecCCcEEEecCCchhhhhcChhHHHHhhhh
Q 011117 115 TIKLMEGIFICAAPHCLKSFLKKTEFEAHIHV 146 (493)
Q Consensus 115 ri~p~esIFIC~~~gCkRtYLSqRDLQAHInh 146 (493)
+++..+..|.|. .|.|+|.+..+|+.|++.
T Consensus 5 ~~h~~~k~~~C~--~C~k~f~~~~~L~~H~~~ 34 (46)
T 2ytt_A 5 SSGEGEKPYQCS--ECGKSFSGSYRLTQHWIT 34 (46)
T ss_dssp SSCSCCCTTCCS--SSCCCCSSHHHHHHHHTH
T ss_pred CCCCCCCCeeCC--CCCcccCCHHHHHHHHHH
Confidence 345556778886 499999999999999865
No 260
>2eoh_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=69.59 E-value=1.1 Score=29.54 Aligned_cols=29 Identities=21% Similarity=0.410 Sum_probs=23.7
Q ss_pred eecCCcEEEecCCchhhhhcChhHHHHhhhh
Q 011117 116 IKLMEGIFICAAPHCLKSFLKKTEFEAHIHV 146 (493)
Q Consensus 116 i~p~esIFIC~~~gCkRtYLSqRDLQAHInh 146 (493)
++..+..|.|.. |.|.|....+|..|++.
T Consensus 6 ~H~~~k~~~C~~--C~k~f~~~~~L~~H~~~ 34 (46)
T 2eoh_A 6 SGSGKKPYECKE--CRKTFIQIGHLNQHKRV 34 (46)
T ss_dssp SCCCSCSCCCSS--SCCCCSSHHHHHHHHHH
T ss_pred CcCCCCCcCCCC--cCchhCCHHHHHHHHHH
Confidence 455567788864 99999999999999764
No 261
>2epr_A POZ-, at HOOK-, and zinc finger-containing protein 1; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1
Probab=69.39 E-value=2.4 Score=28.33 Aligned_cols=27 Identities=19% Similarity=0.230 Sum_probs=22.9
Q ss_pred cCCcEEEecCCchhhhhcChhHHHHhhhh
Q 011117 118 LMEGIFICAAPHCLKSFLKKTEFEAHIHV 146 (493)
Q Consensus 118 p~esIFIC~~~gCkRtYLSqRDLQAHInh 146 (493)
..+..|.|.. |.|+|.....|+.|++.
T Consensus 8 ~~~k~~~C~~--C~k~f~~~~~L~~H~~~ 34 (48)
T 2epr_A 8 RTRKQVACEI--CGKIFRDVYHLNRHKLS 34 (48)
T ss_dssp CCCCSEEETT--TTEEESSHHHHHHHGGG
T ss_pred CCCcCeeCCC--CCcccCCHHHHHHHHHh
Confidence 3466799976 99999999999999764
No 262
>2ytr_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=69.36 E-value=0.9 Score=29.72 Aligned_cols=29 Identities=21% Similarity=0.417 Sum_probs=23.9
Q ss_pred eecCCcEEEecCCchhhhhcChhHHHHhhhh
Q 011117 116 IKLMEGIFICAAPHCLKSFLKKTEFEAHIHV 146 (493)
Q Consensus 116 i~p~esIFIC~~~gCkRtYLSqRDLQAHInh 146 (493)
++..+..|.|.. |.|.|.+..+|+.|++.
T Consensus 6 ~H~~~k~~~C~~--C~k~f~~~~~L~~H~~~ 34 (46)
T 2ytr_A 6 SGTGEKPYKCNE--CGKAFSQTSKLARHQRI 34 (46)
T ss_dssp CCSSCCTTCCTT--TCCCCSSHHHHHHHHTT
T ss_pred CCCCCcCcCCCC--CCCccCCHHHHHHHHHh
Confidence 455667788865 99999999999999764
No 263
>2ytq_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=69.13 E-value=1.1 Score=29.49 Aligned_cols=31 Identities=26% Similarity=0.416 Sum_probs=24.9
Q ss_pred eecCCcEEEecCCchhhhhcChhHHHHhhhhhhc
Q 011117 116 IKLMEGIFICAAPHCLKSFLKKTEFEAHIHVSHA 149 (493)
Q Consensus 116 i~p~esIFIC~~~gCkRtYLSqRDLQAHInhrH~ 149 (493)
++..+..|.|.. |.|+|.+..+|..|++. |.
T Consensus 6 ~H~~~k~~~C~~--C~k~f~~~~~L~~H~~~-H~ 36 (46)
T 2ytq_A 6 SGAGEKPYGCSE--CGKAFSSKSYLIIHMRT-HS 36 (46)
T ss_dssp CSSCCCSCBCSS--SCCBCSCHHHHHHHHTT-TC
T ss_pred CcCCCCCcCCCc--cChhhCChHHHHHHHHH-hC
Confidence 455667789875 99999999999999765 53
No 264
>2xqn_T Testin, TESS; metal-binding protein, cytoskeleton, focal adhesion, acrosom; 2.62A {Homo sapiens}
Probab=68.66 E-value=2.2 Score=34.89 Aligned_cols=55 Identities=18% Similarity=0.277 Sum_probs=37.1
Q ss_pred ccccCCCccccccccccccccccchhhhh--CCCCcccchHhHhhh-eeeecCCcEEE
Q 011117 70 HFCVRCDYPIAIYGRLNPCEHVFCLDCAR--SDSMCYLCDERIQKI-QTIKLMEGIFI 124 (493)
Q Consensus 70 hFCdICdlPI~iygRmIPCKHVFCydCA~--sDktCP~Cna~VqrI-Eri~p~esIFI 124 (493)
+.|..|+.+|..-.-..-=...||..|+. ...+|..|+..|..- ..+..++..|-
T Consensus 31 F~C~~C~~~L~~~~f~~~~g~~yC~~cy~~~~~~~C~~C~~~I~~~~~~~~a~~~~~H 88 (126)
T 2xqn_T 31 FCCFDCDSILAGEIYVMVNDKPVCKPCYVKNHAVVCQGCHNAIDPEVQRVTYNNFSWH 88 (126)
T ss_dssp SBCTTTCCBCTTSEEEEETTEEEEHHHHHHHSCCBCTTTCSBCCTTSCEEEETTEEEE
T ss_pred CCcCCCCCCCCcCEEEeECCEEechHHhCcCcCccCcccCCcCCcCceEEECCCCEee
Confidence 67889998876421111125679999998 457899999999853 23455566665
No 265
>1joc_A EEA1, early endosomal autoantigen 1; FYVE domain, inositol 3-phosphate binding, membrane protein; HET: ITP; 2.20A {Homo sapiens} SCOP: g.50.1.1 h.1.21.1 PDB: 1hyi_A* 1hyj_A
Probab=68.46 E-value=1.4 Score=37.81 Aligned_cols=30 Identities=27% Similarity=0.794 Sum_probs=23.9
Q ss_pred cccccCCCccccccccc---cccccccchhhhh
Q 011117 69 VHFCVRCDYPIAIYGRL---NPCEHVFCLDCAR 98 (493)
Q Consensus 69 vhFCdICdlPI~iygRm---IPCKHVFCydCA~ 98 (493)
...|.+|...|....|- --|+++||.+|..
T Consensus 69 ~~~C~~C~~~Fs~~~RrHHCR~CG~vfC~~Cs~ 101 (125)
T 1joc_A 69 VQNCMACGKGFSVTVRRHHCRQCGNIFCAECSA 101 (125)
T ss_dssp CCBCTTTCCBCCSSSCCEECTTTCCEECGGGSC
T ss_pred CCCCcCcCCccccccccccCCCCCeEEChHHhC
Confidence 57899999998765433 3589999999987
No 266
>2ytm_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=68.38 E-value=1.2 Score=29.44 Aligned_cols=29 Identities=21% Similarity=0.328 Sum_probs=23.6
Q ss_pred eecCCcEEEecCCchhhhhcChhHHHHhhhh
Q 011117 116 IKLMEGIFICAAPHCLKSFLKKTEFEAHIHV 146 (493)
Q Consensus 116 i~p~esIFIC~~~gCkRtYLSqRDLQAHInh 146 (493)
++..+..|.|.. |.|.|.+..+|+.|++.
T Consensus 6 ~h~~~k~~~C~~--C~k~f~~~~~L~~H~~~ 34 (46)
T 2ytm_A 6 SGTGEKPYKCME--CGKAFGDNSSCTQHQRL 34 (46)
T ss_dssp CCSSCCSSSBTT--TTBCCSSHHHHHHHHHH
T ss_pred CCCCCCCcCCCC--CCchhCCHHHHHHHHHH
Confidence 455566788854 99999999999999865
No 267
>1zw8_A Zinc-responsive transcriptional regulator ZAP1; interacting C2H2 zinc fingers, beta-BETA-alpha, solution structure; NMR {Saccharomyces cerevisiae}
Probab=68.24 E-value=1.3 Score=33.59 Aligned_cols=29 Identities=17% Similarity=0.320 Sum_probs=25.6
Q ss_pred EEecCCchhhhhcChhHHHHhhhhhhccc
Q 011117 123 FICAAPHCLKSFLKKTEFEAHIHVSHADL 151 (493)
Q Consensus 123 FIC~~~gCkRtYLSqRDLQAHInhrH~~l 151 (493)
|+|--.+|.+.|-+..+|..||...|..-
T Consensus 2 l~C~W~~C~~~f~~~~~l~~Hv~~~Hv~~ 30 (64)
T 1zw8_A 2 LKCKWKECPESASSLFDLQRHLLKDHVSQ 30 (64)
T ss_dssp CCCCCTTCCCCCSSHHHHHHHHHHHSCCC
T ss_pred CeEeeCCCCCcCCCHHHHHHHHHhhccCc
Confidence 46888899999999999999999888755
No 268
>2yti_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=68.23 E-value=0.94 Score=29.75 Aligned_cols=31 Identities=23% Similarity=0.419 Sum_probs=24.4
Q ss_pred eecCCcEEEecCCchhhhhcChhHHHHhhhhhhc
Q 011117 116 IKLMEGIFICAAPHCLKSFLKKTEFEAHIHVSHA 149 (493)
Q Consensus 116 i~p~esIFIC~~~gCkRtYLSqRDLQAHInhrH~ 149 (493)
++..+..|.|.. |.|.|.+..+|+.|++. |.
T Consensus 6 ~H~~~k~~~C~~--C~k~F~~~~~L~~H~~~-H~ 36 (46)
T 2yti_A 6 SGTGEKPYKCNE--CGKVFTQNSHLARHRGI-HT 36 (46)
T ss_dssp CCSCCCTTCCSS--SCCCCSSHHHHHHHHTT-TS
T ss_pred CCCCCcCeECCC--CCcccCChhHHHHHhHh-cC
Confidence 455566788865 99999999999999753 54
No 269
>2ep1_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=68.14 E-value=1.2 Score=29.18 Aligned_cols=31 Identities=32% Similarity=0.607 Sum_probs=24.8
Q ss_pred eecCCcEEEecCCchhhhhcChhHHHHhhhhhhc
Q 011117 116 IKLMEGIFICAAPHCLKSFLKKTEFEAHIHVSHA 149 (493)
Q Consensus 116 i~p~esIFIC~~~gCkRtYLSqRDLQAHInhrH~ 149 (493)
++..+..|.|. .|.|.|.+..+|..|++. |.
T Consensus 6 ~H~~~k~~~C~--~C~k~f~~~~~L~~H~~~-H~ 36 (46)
T 2ep1_A 6 SGTGEKPYECS--DCGKSFIKKSQLHVHQRI-HT 36 (46)
T ss_dssp CCSSCCSSCCS--SSCCCCSSHHHHHHHHGG-GS
T ss_pred CCCCCCCcCCC--CCCchhCCHHHHHHHHHH-hC
Confidence 45556778886 499999999999999865 54
No 270
>2epq_A POZ-, at HOOK-, and zinc finger-containing protein 1; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1
Probab=67.90 E-value=2.2 Score=27.86 Aligned_cols=28 Identities=21% Similarity=0.405 Sum_probs=23.6
Q ss_pred ecCCcEEEecCCchhhhhcChhHHHHhhhh
Q 011117 117 KLMEGIFICAAPHCLKSFLKKTEFEAHIHV 146 (493)
Q Consensus 117 ~p~esIFIC~~~gCkRtYLSqRDLQAHInh 146 (493)
+..+.-|.|.. |.|+|....+|..|++.
T Consensus 5 h~~~k~~~C~~--C~k~f~~~~~l~~H~~~ 32 (45)
T 2epq_A 5 SSGEKPYSCPV--CGLRFKRKDRMSYHVRS 32 (45)
T ss_dssp CSSCCSSEETT--TTEECSCHHHHHHHHHH
T ss_pred cCCCCCCcCCC--CCcccCCHHHHHHHHHH
Confidence 44567799875 99999999999999865
No 271
>1rik_A E6APC1 peptide; E6-binding domain, zinc finger, human papillomavirus, HPV E6 protein, de novo protein; NMR {Synthetic} SCOP: k.12.1.1 PDB: 1sp1_A 1va3_A
Probab=67.48 E-value=2.4 Score=24.50 Aligned_cols=22 Identities=32% Similarity=0.821 Sum_probs=18.7
Q ss_pred EEecCCchhhhhcChhHHHHhhhh
Q 011117 123 FICAAPHCLKSFLKKTEFEAHIHV 146 (493)
Q Consensus 123 FIC~~~gCkRtYLSqRDLQAHInh 146 (493)
|.|. .|.+.|.+..+|..|++.
T Consensus 3 ~~C~--~C~k~f~~~~~l~~H~~~ 24 (29)
T 1rik_A 3 FACP--ECPKRFMRSDHLTLHILL 24 (29)
T ss_dssp EECS--SSSCEESCSHHHHHHHTG
T ss_pred ccCC--CCCchhCCHHHHHHHHHH
Confidence 6664 599999999999999864
No 272
>1x5w_A Zinc finger protein 64, isoforms 1; ZNF338, nuclear protein, DNA binding, transcription, C2H2 type zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1
Probab=66.91 E-value=2.5 Score=30.08 Aligned_cols=28 Identities=21% Similarity=0.311 Sum_probs=23.5
Q ss_pred CCcEEEecCCchhhhhcChhHHHHhhhhhhc
Q 011117 119 MEGIFICAAPHCLKSFLKKTEFEAHIHVSHA 149 (493)
Q Consensus 119 ~esIFIC~~~gCkRtYLSqRDLQAHInhrH~ 149 (493)
.+..|.|.. |.|.|.+..+|+.|++. |.
T Consensus 6 ~~~~~~C~~--C~k~f~~~~~L~~H~~~-H~ 33 (70)
T 1x5w_A 6 SGHPEKCSE--CSYSCSSKAALRIHERI-HC 33 (70)
T ss_dssp CCCSEECSS--SSCEESSHHHHHHHHGG-GC
T ss_pred CCCCeECCC--CCcccCCHHHHHHHHHH-cC
Confidence 456799875 99999999999999876 54
No 273
>2em6_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=66.63 E-value=1.5 Score=28.86 Aligned_cols=31 Identities=23% Similarity=0.491 Sum_probs=24.5
Q ss_pred eecCCcEEEecCCchhhhhcChhHHHHhhhhhhc
Q 011117 116 IKLMEGIFICAAPHCLKSFLKKTEFEAHIHVSHA 149 (493)
Q Consensus 116 i~p~esIFIC~~~gCkRtYLSqRDLQAHInhrH~ 149 (493)
++..+..|.|.. |.|.|.+..+|+.|++ .|.
T Consensus 6 ~H~~~k~~~C~~--C~k~f~~~~~L~~H~~-~H~ 36 (46)
T 2em6_A 6 SGMGEKCYKCDV--CGKEFSQSSHLQTHQR-VHT 36 (46)
T ss_dssp CCCCCCCCBCSS--SCCBCSSHHHHHHHHT-TTS
T ss_pred ccCCCCCeECCC--CCcccCCHHHHHHHHH-HcC
Confidence 455567788875 9999999999999975 453
No 274
>2eou_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=66.62 E-value=1.5 Score=28.54 Aligned_cols=29 Identities=17% Similarity=0.209 Sum_probs=23.6
Q ss_pred eecCCcEEEecCCchhhhhcChhHHHHhhhh
Q 011117 116 IKLMEGIFICAAPHCLKSFLKKTEFEAHIHV 146 (493)
Q Consensus 116 i~p~esIFIC~~~gCkRtYLSqRDLQAHInh 146 (493)
++..+..|.|. .|.|.|.....|..|++.
T Consensus 6 ~h~~~~~~~C~--~C~k~f~~~~~L~~H~~~ 34 (44)
T 2eou_A 6 SGAAKTTSECQ--ECGKIFRHSSLLIEHQAL 34 (44)
T ss_dssp SCSSSCCCCCT--TTCCCCSSHHHHHHHHHH
T ss_pred CCCCCcCeECC--CCCcccCCHHHHHHHHHH
Confidence 34456778886 599999999999999764
No 275
>2eom_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=66.57 E-value=1.4 Score=29.05 Aligned_cols=31 Identities=29% Similarity=0.434 Sum_probs=24.5
Q ss_pred eecCCcEEEecCCchhhhhcChhHHHHhhhhhhc
Q 011117 116 IKLMEGIFICAAPHCLKSFLKKTEFEAHIHVSHA 149 (493)
Q Consensus 116 i~p~esIFIC~~~gCkRtYLSqRDLQAHInhrH~ 149 (493)
++..+..|.|. .|.|+|.....|..|++. |.
T Consensus 6 ~h~~~k~~~C~--~C~k~F~~~~~L~~H~~~-H~ 36 (46)
T 2eom_A 6 SGHGERGHRCS--DCGKFFLQASNFIQHRRI-HT 36 (46)
T ss_dssp CCCCCSSCCCS--SSCCCCSSHHHHHHHHHH-HS
T ss_pred CCCCCCCcCCC--CCCCeeCChHHHHHHHHH-hC
Confidence 44556678885 599999999999999764 43
No 276
>1rut_X Flinc4, fusion protein of LMO4 protein and LIM domain- binding protein 1; B-tandem zipper, protein binding; 1.30A {Mus musculus} SCOP: g.39.1.3 g.39.1.3 g.39.1.3 g.39.1.3 PDB: 2dfy_X 2xjz_I 2xjy_B
Probab=66.48 E-value=2.1 Score=37.74 Aligned_cols=63 Identities=13% Similarity=0.360 Sum_probs=41.1
Q ss_pred ccccCCCccccc----cccccccccccchhhhhC--CC--CcccchHhHhhhee-eecCCcEEE--ec-CCchhhhh
Q 011117 70 HFCVRCDYPIAI----YGRLNPCEHVFCLDCARS--DS--MCYLCDERIQKIQT-IKLMEGIFI--CA-APHCLKSF 134 (493)
Q Consensus 70 hFCdICdlPI~i----ygRmIPCKHVFCydCA~s--Dk--tCP~Cna~VqrIEr-i~p~esIFI--C~-~~gCkRtY 134 (493)
+.|..|+.+|.. ++..- ...||..|+.. .. +|..|...|...|. +...+.+|- |. ...|.+.+
T Consensus 33 F~C~~C~~~L~~~g~~~~~~~--g~~yC~~cy~~~~~~~~~C~~C~~~I~~~e~~i~a~~~~~H~~CF~C~~C~~~L 107 (188)
T 1rut_X 33 LKCSSCQAQLGDIGTSSYTKS--GMILCRNDYIRLFGNSGACSACGQSIPASELVMRAQGNVYHLKCFTCSTCRNRL 107 (188)
T ss_dssp CBCTTTCCBHHHHCSEEEEET--TEEECHHHHHHHHSCCEECTTTCCEECTTSEEEEETTEEECGGGCBCTTTCCBC
T ss_pred cccCCCCcccccCCceEEEeC--CccccccccccccccCCccccCCCccccCcEEEEcCCCEEeCCCCeECCCCCCC
Confidence 679999988863 22222 57899999972 23 79999999986553 344566662 22 23566655
No 277
>2yrm_A B-cell lymphoma 6 protein; ZF-C2H2, zinc binding, DNA binding, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=66.48 E-value=1.5 Score=28.60 Aligned_cols=29 Identities=21% Similarity=0.382 Sum_probs=23.5
Q ss_pred eecCCcEEEecCCchhhhhcChhHHHHhhhh
Q 011117 116 IKLMEGIFICAAPHCLKSFLKKTEFEAHIHV 146 (493)
Q Consensus 116 i~p~esIFIC~~~gCkRtYLSqRDLQAHInh 146 (493)
++..+..|.|.. |.|.|.+...|..|++.
T Consensus 4 ~h~~~k~~~C~~--C~k~f~~~~~L~~H~~~ 32 (43)
T 2yrm_A 4 GSSGNGAFFCNE--CDCRFSEEASLKRHTLQ 32 (43)
T ss_dssp CCSSSCCBCCSS--SCCCBSSHHHHHHHHHH
T ss_pred CcCCCCCEECCC--CCCeeCChHHHHHHHHh
Confidence 344566788865 99999999999999764
No 278
>2lvu_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc finger, transcription; NMR {Homo sapiens}
Probab=69.77 E-value=1.2 Score=25.61 Aligned_cols=22 Identities=27% Similarity=0.822 Sum_probs=18.1
Q ss_pred EEecCCchhhhhcChhHHHHhhhh
Q 011117 123 FICAAPHCLKSFLKKTEFEAHIHV 146 (493)
Q Consensus 123 FIC~~~gCkRtYLSqRDLQAHInh 146 (493)
|.|. .|.|.|....+|..|++.
T Consensus 3 ~~C~--~C~k~f~~~~~l~~H~~~ 24 (26)
T 2lvu_A 3 YVCE--RCGKRFVQSSQLANHIRH 24 (26)
Confidence 5654 599999999999999754
No 279
>1z2q_A LM5-1; membrane protein, FYVE domain, zinc-finger; NMR {Leishmania major}
Probab=66.22 E-value=2.4 Score=33.84 Aligned_cols=49 Identities=24% Similarity=0.534 Sum_probs=34.8
Q ss_pred CcccccccCCCccccccccc---cccccccchhhhhC------------CCCcccchHhHhhhe
Q 011117 66 GERVHFCVRCDYPIAIYGRL---NPCEHVFCLDCARS------------DSMCYLCDERIQKIQ 114 (493)
Q Consensus 66 gEKvhFCdICdlPI~iygRm---IPCKHVFCydCA~s------------DktCP~Cna~VqrIE 114 (493)
.+....|.+|...|....|- --|.++||.+|... ..+|-.|-+.++...
T Consensus 18 d~~~~~C~~C~~~Fs~~~RrHHCR~CG~v~C~~Cs~~~~~lp~~~~~~~~RVC~~C~~~l~~~~ 81 (84)
T 1z2q_A 18 DEDAPACNGCGCVFTTTVRRHHCRNCGYVLCGDCSRHRAAIPMRGITEPERVCDACYLALRSSN 81 (84)
T ss_dssp TTTCCBCTTTCCBCCTTSCCEECTTTCCEECTGGGCCEEEETTTTEEEEEECCHHHHHHHHTSC
T ss_pred CCCCCCCcCcCCccccchhcccccCCCcEEChHHhCCeEeccCCCCCCCCEECHHHHHHHhhcc
Confidence 34478899999998765443 35889999999861 136777777665543
No 280
>1yui_A GAGA-factor; complex (DNA-binding protein/DNA), chromatin remodeling, DNA binding protein/DNA complex; HET: DNA; NMR {Drosophila melanogaster} SCOP: g.37.1.1 PDB: 1yuj_A*
Probab=65.88 E-value=1.2 Score=30.55 Aligned_cols=31 Identities=13% Similarity=0.322 Sum_probs=25.1
Q ss_pred eeeecCCcEEEecCCchhhhhcChhHHHHhhhh
Q 011117 114 QTIKLMEGIFICAAPHCLKSFLKKTEFEAHIHV 146 (493)
Q Consensus 114 Eri~p~esIFIC~~~gCkRtYLSqRDLQAHInh 146 (493)
.+++..+.-|.|.. |.|+|.....|..|+..
T Consensus 16 ~~~H~~~k~~~C~~--C~k~f~~~~~L~~H~~~ 46 (54)
T 1yui_A 16 RSRSQSEQPATCPI--CYAVIRQSRNLRRHLEL 46 (54)
T ss_dssp HHHHTSSCCEECTT--TCCEESSHHHHHHHHHH
T ss_pred HHhcCCCCCccCCC--CCcccCCHHHHHHHHHH
Confidence 34555677899864 99999999999999864
No 281
>2kvg_A Zinc finger and BTB domain-containing protein 32; protein/DNA, metal-binding, transcription; NMR {Mus musculus}
Probab=65.73 E-value=2.3 Score=24.88 Aligned_cols=22 Identities=18% Similarity=0.452 Sum_probs=19.0
Q ss_pred EEEecCCchhhhhcChhHHHHhhh
Q 011117 122 IFICAAPHCLKSFLKKTEFEAHIH 145 (493)
Q Consensus 122 IFIC~~~gCkRtYLSqRDLQAHIn 145 (493)
-|.|. .|.|.|....+|..|+.
T Consensus 3 ~~~C~--~C~k~f~~~~~l~~H~~ 24 (27)
T 2kvg_A 3 PYRCP--LCRAGCPSLASMQAHMR 24 (27)
T ss_dssp TEEET--TTTEEESCHHHHHHHHT
T ss_pred CcCCC--CCCcccCCHHHHHHHHH
Confidence 47776 59999999999999975
No 282
>2elz_A Zinc finger protein 224; DNA-binding, metal-binding, nuclear protein, phosphorylation, polymorphism, repeat, repressor, transcription; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=65.26 E-value=1.6 Score=28.76 Aligned_cols=31 Identities=19% Similarity=0.455 Sum_probs=24.8
Q ss_pred eecCCcEEEecCCchhhhhcChhHHHHhhhhhhc
Q 011117 116 IKLMEGIFICAAPHCLKSFLKKTEFEAHIHVSHA 149 (493)
Q Consensus 116 i~p~esIFIC~~~gCkRtYLSqRDLQAHInhrH~ 149 (493)
++..+..|.|. .|.|.|.+..+|..|++ .|.
T Consensus 6 ~h~~~k~~~C~--~C~k~F~~~~~L~~H~~-~H~ 36 (46)
T 2elz_A 6 SGSVEKPYKCE--DCGKGYNRRLNLDMHQR-VHM 36 (46)
T ss_dssp CCCCCSSCBCS--SSCCBCSSHHHHHHHGG-GGG
T ss_pred CCCCCCCeeCc--ccCchhCCHHHHHHHHH-hcC
Confidence 45566778885 69999999999999976 354
No 283
>1ard_A Yeast transcription factor ADR1; transcription regulation; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1 PDB: 1arf_A 1are_A
Probab=64.53 E-value=1.9 Score=24.88 Aligned_cols=22 Identities=23% Similarity=0.779 Sum_probs=18.4
Q ss_pred EEecCCchhhhhcChhHHHHhhhh
Q 011117 123 FICAAPHCLKSFLKKTEFEAHIHV 146 (493)
Q Consensus 123 FIC~~~gCkRtYLSqRDLQAHInh 146 (493)
|.|. .|.+.|.+...|..|+..
T Consensus 3 ~~C~--~C~~~f~~~~~l~~H~~~ 24 (29)
T 1ard_A 3 FVCE--VCTRAFARQEHLKRHYRS 24 (29)
T ss_dssp CBCT--TTCCBCSSHHHHHHHHHH
T ss_pred eECC--CCCcccCCHHHHHHHHHH
Confidence 5564 599999999999999764
No 284
>2m0e_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc fingers, transcription; NMR {Homo sapiens}
Probab=64.05 E-value=1.6 Score=24.98 Aligned_cols=22 Identities=32% Similarity=0.729 Sum_probs=18.0
Q ss_pred EEecCCchhhhhcChhHHHHhhhh
Q 011117 123 FICAAPHCLKSFLKKTEFEAHIHV 146 (493)
Q Consensus 123 FIC~~~gCkRtYLSqRDLQAHInh 146 (493)
|.|. .|.++|.....|..|+..
T Consensus 3 ~~C~--~C~~~f~~~~~l~~H~~~ 24 (29)
T 2m0e_A 3 HKCP--HCDKKFNQVGNLKAHLKI 24 (29)
T ss_dssp CCCS--SCCCCCCTTTHHHHHHHH
T ss_pred CcCC--CCCcccCCHHHHHHHHHH
Confidence 4554 499999999999999864
No 285
>1p7a_A BF3, BKLF, kruppel-like factor 3; classical zinc finger, transcription factor, DNA binding protein; NMR {Mus musculus} SCOP: g.37.1.1 PDB: 1u85_A 1u86_A
Probab=63.96 E-value=1.8 Score=26.88 Aligned_cols=28 Identities=21% Similarity=0.355 Sum_probs=22.8
Q ss_pred ecCCcEEEecCCchhhhhcChhHHHHhhhh
Q 011117 117 KLMEGIFICAAPHCLKSFLKKTEFEAHIHV 146 (493)
Q Consensus 117 ~p~esIFIC~~~gCkRtYLSqRDLQAHInh 146 (493)
+..+..|.|. .|.|.|.....|..|++.
T Consensus 6 h~~~k~~~C~--~C~k~f~~~~~l~~H~~~ 33 (37)
T 1p7a_A 6 STGIKPFQCP--DCDRSFSRSDHLALHRKR 33 (37)
T ss_dssp TCCSSSBCCT--TTCCCBSSHHHHHHHHGG
T ss_pred CCCCCCccCC--CCCcccCcHHHHHHHHHH
Confidence 4456678885 699999999999999754
No 286
>2jrp_A Putative cytoplasmic protein; two-zinc binding protein, structural genomics, PSI-2, protein structure initiative; NMR {Salmonella typhimurium LT2}
Probab=63.36 E-value=1 Score=37.39 Aligned_cols=50 Identities=20% Similarity=0.523 Sum_probs=34.3
Q ss_pred ccccCCCccccccccccccccccchhhhh---CCCCcccchHhHhhheeeecCCcEEEec
Q 011117 70 HFCVRCDYPIAIYGRLNPCEHVFCLDCAR---SDSMCYLCDERIQKIQTIKLMEGIFICA 126 (493)
Q Consensus 70 hFCdICdlPI~iygRmIPCKHVFCydCA~---sDktCP~Cna~VqrIEri~p~esIFIC~ 126 (493)
..|++|..+|.-.++ +.+|..|-+ ....||.|..+++.+..+.. .-|.|.
T Consensus 3 ~~CP~C~~~l~~~~~-----~~~C~~C~~~~~~~afCPeCgq~Le~lkACGA--~~yFC~ 55 (81)
T 2jrp_A 3 ITCPVCHHALERNGD-----TAHCETCAKDFSLQALCPDCRQPLQVLKACGA--VDYFCQ 55 (81)
T ss_dssp CCCSSSCSCCEECSS-----EEECTTTCCEEEEEEECSSSCSCCCEEEETTE--EEECCT
T ss_pred CCCCCCCCccccCCC-----ceECccccccCCCcccCcchhhHHHHHHhcCC--cCeeec
Confidence 578888888776655 556888877 34578888888877666642 245554
No 287
>2lvt_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc finger, transcription; NMR {Homo sapiens}
Probab=66.46 E-value=1.6 Score=25.52 Aligned_cols=21 Identities=29% Similarity=0.618 Sum_probs=17.8
Q ss_pred EEecCCchhhhhcChhHHHHhhh
Q 011117 123 FICAAPHCLKSFLKKTEFEAHIH 145 (493)
Q Consensus 123 FIC~~~gCkRtYLSqRDLQAHIn 145 (493)
|.|. .|.|+|....+|..|+.
T Consensus 3 ~~C~--~C~k~f~~~~~l~~H~~ 23 (29)
T 2lvt_A 3 CQCV--MCGKAFTQASSLIAHVR 23 (29)
Confidence 5664 59999999999999975
No 288
>2dmi_A Teashirt homolog 3; zinc finger protein 537, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=61.78 E-value=2 Score=33.19 Aligned_cols=33 Identities=18% Similarity=0.310 Sum_probs=26.9
Q ss_pred hheeeecCCcEEEecCCchhhhhcChhHHHHhhhh
Q 011117 112 KIQTIKLMEGIFICAAPHCLKSFLKKTEFEAHIHV 146 (493)
Q Consensus 112 rIEri~p~esIFIC~~~gCkRtYLSqRDLQAHInh 146 (493)
.-.+++..+..|.|. .|.|+|.+...|+.|++.
T Consensus 9 ~H~~~H~~~~~~~C~--~C~k~f~~~~~L~~H~~~ 41 (115)
T 2dmi_A 9 LYGSIFTGASKFRCK--DCSAAYDTLVELTVHMNE 41 (115)
T ss_dssp CCCCCCCCCCSEEBS--SSSCEESSHHHHHHHHHH
T ss_pred hheeeeCCCCCEECC--ccCchhcCHHHHHHHHHH
Confidence 334556667789997 599999999999999985
No 289
>3mpx_A FYVE, rhogef and PH domain-containing protein 5; structural genomics consortium, DH domain, SGC, L binding protein; 2.80A {Homo sapiens}
Probab=61.45 E-value=1.7 Score=42.04 Aligned_cols=30 Identities=27% Similarity=0.823 Sum_probs=0.0
Q ss_pred cccccCCCcccccccc---ccccccccchhhhh
Q 011117 69 VHFCVRCDYPIAIYGR---LNPCEHVFCLDCAR 98 (493)
Q Consensus 69 vhFCdICdlPI~iygR---mIPCKHVFCydCA~ 98 (493)
...|.+|..+|....| .--|+++||..|..
T Consensus 375 ~~~c~~c~~~f~~~~r~h~Cr~Cg~~~C~~Cs~ 407 (434)
T 3mpx_A 375 VMMCMNCGCDFSLTLRRHHCHACGKIVCRNCSR 407 (434)
T ss_dssp ---------------------------------
T ss_pred CCcCCCcCCCCCCcchhhhcccCcCEeehhhCC
Confidence 5789999998876543 34688999999985
No 290
>2d9h_A Zinc finger protein 692; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=61.42 E-value=3.5 Score=29.76 Aligned_cols=28 Identities=14% Similarity=0.151 Sum_probs=23.7
Q ss_pred CCcEEEecCCchhhhhcChhHHHHhhhhhh
Q 011117 119 MEGIFICAAPHCLKSFLKKTEFEAHIHVSH 148 (493)
Q Consensus 119 ~esIFIC~~~gCkRtYLSqRDLQAHInhrH 148 (493)
.+.-|.|.. |.|.|.+...|..|++.-+
T Consensus 4 ~~k~~~C~~--C~k~f~~~~~L~~H~~~h~ 31 (78)
T 2d9h_A 4 GSSGLQCEI--CGFTCRQKASLNWHQRKHA 31 (78)
T ss_dssp SCCCEECSS--SCCEESSHHHHHHHHHHHH
T ss_pred CCcCeECCC--CCCeeCCHHHHHHHHHHhh
Confidence 467799876 9999999999999986544
No 291
>2rgt_A Fusion of LIM/homeobox protein LHX3, linker, INSU enhancer protein ISL-1; protein-protein complex, LIM domain, Zn finger, activator, D binding; 2.05A {Mus musculus} PDB: 3mmk_A
Probab=59.54 E-value=4 Score=35.30 Aligned_cols=65 Identities=22% Similarity=0.436 Sum_probs=40.8
Q ss_pred ccccCCCccccccccccccccccchhhhh--CCCCcccchHhHhhheee-ecCCcEEE--ec-CCchhhhhc
Q 011117 70 HFCVRCDYPIAIYGRLNPCEHVFCLDCAR--SDSMCYLCDERIQKIQTI-KLMEGIFI--CA-APHCLKSFL 135 (493)
Q Consensus 70 hFCdICdlPI~iygRmIPCKHVFCydCA~--sDktCP~Cna~VqrIEri-~p~esIFI--C~-~~gCkRtYL 135 (493)
+.|..|+.+|..-. ..-=...||..|+. -..+|..|...|...+.+ ...+.+|- |. ...|.+.+.
T Consensus 34 F~C~~C~~~L~~~~-f~~~g~~yC~~~y~~~f~~~C~~C~~~I~~~~~v~~a~~~~~H~~CF~C~~C~~~L~ 104 (169)
T 2rgt_A 34 LKCSDCHVPLAERC-FSRGESVYCKDDFFKRFGTKCAACQLGIPPTQVVRRAQDFVYHLHCFACVVCKRQLA 104 (169)
T ss_dssp SBCTTTCCBCCSCC-EESSSCEECHHHHHHHHSCBCTTTCCBCCTTSEEEEETTEEEEGGGCBCTTTCCBCC
T ss_pred CccCCCCCcCCCCC-cccCCeeeecccccccccccccccccccCCCcEEEEcCCceEeeCCCcCCCCCCCCC
Confidence 67889998876422 11125679999997 347899999998765532 34555552 21 134655543
No 292
>1vfy_A Phosphatidylinositol-3-phosphate binding FYVE domain of protein VPS27; endosome maturation, intracellular trafficking; 1.15A {Saccharomyces cerevisiae} SCOP: g.50.1.1
Probab=59.21 E-value=3.2 Score=32.39 Aligned_cols=44 Identities=25% Similarity=0.581 Sum_probs=30.7
Q ss_pred ccccCCCccccccccc---cccccccchhhhhC------------CCCcccchHhHhhh
Q 011117 70 HFCVRCDYPIAIYGRL---NPCEHVFCLDCARS------------DSMCYLCDERIQKI 113 (493)
Q Consensus 70 hFCdICdlPI~iygRm---IPCKHVFCydCA~s------------DktCP~Cna~VqrI 113 (493)
..|.+|...|..-.|- --|+++||.+|... ..+|-.|-+.++.|
T Consensus 12 ~~C~~C~~~F~~~~RrHHCR~CG~v~C~~Cs~~~~~lp~~~~~~~~RVC~~C~~~l~~i 70 (73)
T 1vfy_A 12 DACMICSKKFSLLNRKHHCRSCGGVFCQEHSSNSIPLPDLGIYEPVRVCDSCFEDYEFI 70 (73)
T ss_dssp SBCTTTCCBCBTTBCCEECTTTCCEECGGGSCEEEEEGGGTEEEEEEECHHHHHHHHHH
T ss_pred CcccCCCCccCCccccccCCCCCEEEcccccCCeEEcccCCCCCCCEECHHHHHHHHHH
Confidence 5799999988765443 35889999999861 14566666666554
No 293
>2jne_A Hypothetical protein YFGJ; zinc fingers, two zinc, structural genomics, PSI-2, protein structure initiative; NMR {Escherichia coli} SCOP: g.41.18.1
Probab=58.45 E-value=1.4 Score=38.12 Aligned_cols=50 Identities=18% Similarity=0.506 Sum_probs=37.5
Q ss_pred ccccCCCccccccccccccccccchhhhh---CCCCcccchHhHhhheeeecCCcEEEec
Q 011117 70 HFCVRCDYPIAIYGRLNPCEHVFCLDCAR---SDSMCYLCDERIQKIQTIKLMEGIFICA 126 (493)
Q Consensus 70 hFCdICdlPI~iygRmIPCKHVFCydCA~---sDktCP~Cna~VqrIEri~p~esIFIC~ 126 (493)
..|++|+.++.-.+ .+.+|..|.. ....||-|.++++.+..+.. -=|.|-
T Consensus 33 ~~CP~Cq~eL~~~g-----~~~hC~~C~~~f~~~a~CPdC~q~LevLkACGA--vdYFC~ 85 (101)
T 2jne_A 33 LHCPQCQHVLDQDN-----GHARCRSCGEFIEMKALCPDCHQPLQVLKACGA--VDYFCQ 85 (101)
T ss_dssp CBCSSSCSBEEEET-----TEEEETTTCCEEEEEEECTTTCSBCEEEEETTE--EEEEET
T ss_pred ccCccCCCcceecC-----CEEECccccchhhccccCcchhhHHHHHHHhcC--cchhhc
Confidence 79999998877644 3557999987 45789999999988887742 335654
No 294
>1rim_A E6APC2 peptide; E6-binding domain, zinc finger, human papillomavirus, HPV E6 protein, de novo protein; NMR {Synthetic} SCOP: k.12.1.1
Probab=58.18 E-value=2.4 Score=26.29 Aligned_cols=22 Identities=32% Similarity=0.862 Sum_probs=18.3
Q ss_pred EEecCCchhhhhcChhHHHHhhhh
Q 011117 123 FICAAPHCLKSFLKKTEFEAHIHV 146 (493)
Q Consensus 123 FIC~~~gCkRtYLSqRDLQAHInh 146 (493)
|.|. .|.|.|....+|..|+..
T Consensus 3 ~~C~--~C~k~F~~~~~L~~H~~~ 24 (33)
T 1rim_A 3 FACP--ECPKRFMRSDHLSKHITL 24 (33)
T ss_dssp CCCS--SSCCCCSSHHHHHHHHHH
T ss_pred ccCC--CCCchhCCHHHHHHHHHH
Confidence 5564 599999999999999863
No 295
>2csh_A Zinc finger protein 297B; ZF-C2H2 domain, zinc finger and BTB domain containing protein 22B, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1
Probab=57.79 E-value=4.3 Score=31.00 Aligned_cols=32 Identities=22% Similarity=0.427 Sum_probs=22.3
Q ss_pred eeecCCcEEEecCCchhhhhcChhHHHHhhhhhh
Q 011117 115 TIKLMEGIFICAAPHCLKSFLKKTEFEAHIHVSH 148 (493)
Q Consensus 115 ri~p~esIFIC~~~gCkRtYLSqRDLQAHInhrH 148 (493)
+++..+..|.|.. |.+.|.+..+|+.|++.-|
T Consensus 30 ~~h~~~~~~~C~~--C~~~f~~~~~l~~H~~~h~ 61 (110)
T 2csh_A 30 SMHLGLRPYGCGV--CGKKFKMKHHLVGHMKIHT 61 (110)
T ss_dssp HHHSCCCSEECTT--TSCEESSSHHHHHHHTTTC
T ss_pred HHcCCCcCccCCC--CCcccCCHHHHHHHHHHcC
Confidence 3455566788765 8888888888888876433
No 296
>2ko5_A Ring finger protein Z; lassa fever virus-Z, negative regulator of EIF4E, cytoplasm, HOST-virus interaction, lipoprotein, membrane; NMR {Lassa virus josiah}
Probab=56.23 E-value=3.3 Score=35.70 Aligned_cols=39 Identities=26% Similarity=0.727 Sum_probs=29.8
Q ss_pred ccccCCCccccccccccccccccchhhhh----CCCCcccchHhH
Q 011117 70 HFCVRCDYPIAIYGRLNPCEHVFCLDCAR----SDSMCYLCDERI 110 (493)
Q Consensus 70 hFCdICdlPI~iygRmIPCKHVFCydCA~----sDktCP~Cna~V 110 (493)
++|-.|=+..+ +-+-+.-|.+|+.|.. ....|++|...+
T Consensus 29 ~nCKsCWf~~k--~LV~C~dHYLCl~CLtlmL~~SdrCpIC~~pL 71 (99)
T 2ko5_A 29 QFCKSCWFENK--GLVECNNHYLCLNCLTLLLSVSNRCPICKMPL 71 (99)
T ss_dssp CCCCSSCSCCS--SEEECSSCEEEHHHHHHTCSSSSEETTTTEEC
T ss_pred ccChhhccccC--CeeeecchhhHHHHHHHHHhhccCCcccCCcC
Confidence 89999976655 4444568999999998 346799998754
No 297
>1dvp_A HRS, hepatocyte growth factor-regulated tyrosine kinase substrate; VHS, FYVE, zinc finger, superhelix, transferase; HET: CIT; 2.00A {Drosophila melanogaster} SCOP: a.118.9.2 g.50.1.1
Probab=55.26 E-value=3 Score=37.99 Aligned_cols=30 Identities=30% Similarity=0.734 Sum_probs=23.4
Q ss_pred cccccCCCccccccccc---cccccccchhhhh
Q 011117 69 VHFCVRCDYPIAIYGRL---NPCEHVFCLDCAR 98 (493)
Q Consensus 69 vhFCdICdlPI~iygRm---IPCKHVFCydCA~ 98 (493)
...|.+|...|....|- --|+++||.+|..
T Consensus 161 ~~~C~~C~~~F~~~~rrhhCr~CG~v~C~~Cs~ 193 (220)
T 1dvp_A 161 GRVCHRCRVEFTFTNRKHHCRNCGQVFCGQCTA 193 (220)
T ss_dssp CSBCTTTCCBCCSSSCCEECTTTCCEECSTTSC
T ss_pred CCccCCCCCccCCcccccccCCcCCEEChHHhC
Confidence 46899999988754432 4588999999986
No 298
>3lqh_A Histone-lysine N-methyltransferase MLL; PHD finger, bromodomain, leukemia, apoptosis, chromati regulator, DNA-binding, isopeptide bond; 1.72A {Homo sapiens} PDB: 3lqi_A* 3lqj_A* 2kyu_A
Probab=54.92 E-value=2.9 Score=38.36 Aligned_cols=20 Identities=25% Similarity=0.509 Sum_probs=14.6
Q ss_pred cccccCCCccccccc---ccccc
Q 011117 69 VHFCVRCDYPIAIYG---RLNPC 88 (493)
Q Consensus 69 vhFCdICdlPI~iyg---RmIPC 88 (493)
+.+|++|+++...-- .||-|
T Consensus 2 G~~CpiC~k~Y~~~~~~~~MIqC 24 (183)
T 3lqh_A 2 GNFCPLCDKCYDDDDYESKMMQC 24 (183)
T ss_dssp CCBCTTTCCBCTTCCTTCCEEEC
T ss_pred cCcCCCCcCccCCcccCCCeEEC
Confidence 578999999877643 36765
No 299
>2lce_A B-cell lymphoma 6 protein; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative; NMR {Homo sapiens}
Probab=53.96 E-value=3.4 Score=29.64 Aligned_cols=28 Identities=25% Similarity=0.455 Sum_probs=23.3
Q ss_pred ecCCcEEEecCCchhhhhcChhHHHHhhhh
Q 011117 117 KLMEGIFICAAPHCLKSFLKKTEFEAHIHV 146 (493)
Q Consensus 117 ~p~esIFIC~~~gCkRtYLSqRDLQAHInh 146 (493)
...+..|.|. .|.|+|.+..+|+.|++.
T Consensus 12 ~~~~~~~~C~--~C~k~f~~~~~l~~H~~~ 39 (74)
T 2lce_A 12 THSDKPYKCD--RCQASFRYKGNLASHKTV 39 (74)
T ss_dssp CCCCCSBCCT--TSSCCBSCHHHHHHHHHH
T ss_pred cCCCCCeECC--CCCceeCCHHHHHHHHHH
Confidence 3456789986 499999999999999864
No 300
>3uk3_C Zinc finger protein 217; transcription factor, DNA binding, DNA-metal BI protein complex; 2.10A {Homo sapiens}
Probab=53.26 E-value=3.7 Score=27.69 Aligned_cols=24 Identities=21% Similarity=0.324 Sum_probs=19.5
Q ss_pred cEEEecCCchhhhhcChhHHHHhhhh
Q 011117 121 GIFICAAPHCLKSFLKKTEFEAHIHV 146 (493)
Q Consensus 121 sIFIC~~~gCkRtYLSqRDLQAHInh 146 (493)
..|.|.. |.+.|.+...|..|++.
T Consensus 3 ~~~~C~~--C~~~f~~~~~l~~H~~~ 26 (57)
T 3uk3_C 3 SSRECSY--CGKFFRSNYYLNIHLRT 26 (57)
T ss_dssp --CBCTT--TCCBCSCHHHHHHHHHH
T ss_pred CCccCCC--CcchhCChHHHHHHHHH
Confidence 4577765 99999999999999875
No 301
>1wjp_A Zinc finger protein 295; ZF-C2H2 domain, zinc binding, nucleic acid binding, KIAA1227 protein, structural genomics; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1
Probab=52.91 E-value=4 Score=31.24 Aligned_cols=23 Identities=17% Similarity=0.352 Sum_probs=17.0
Q ss_pred cEEEecCCchhhhhcChhHHHHhhh
Q 011117 121 GIFICAAPHCLKSFLKKTEFEAHIH 145 (493)
Q Consensus 121 sIFIC~~~gCkRtYLSqRDLQAHIn 145 (493)
.-|.|.. |.+.|.+..+|+.|+.
T Consensus 41 ~~~~C~~--C~~~f~~~~~l~~H~~ 63 (107)
T 1wjp_A 41 NAAVCPY--CSLRFFSPELKQEHES 63 (107)
T ss_dssp HSBCCTT--TCCCBSSHHHHHHHHH
T ss_pred CCccCCC--CCCccCCHHHHHHHHH
Confidence 4577654 8888888888888873
No 302
>1x4u_A Zinc finger, FYVE domain containing 27 isoform B; phosphoinositide binding, zinc binding, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=52.38 E-value=7.3 Score=30.98 Aligned_cols=33 Identities=18% Similarity=0.601 Sum_probs=25.3
Q ss_pred CcccccccCCCccccccccc---cccccccchhhhh
Q 011117 66 GERVHFCVRCDYPIAIYGRL---NPCEHVFCLDCAR 98 (493)
Q Consensus 66 gEKvhFCdICdlPI~iygRm---IPCKHVFCydCA~ 98 (493)
.+....|.+|...|....|- --|..+||.+|..
T Consensus 11 d~~~~~C~~C~~~F~~~~RrHHCR~CG~vfC~~Cs~ 46 (84)
T 1x4u_A 11 TNNFGNCTGCSATFSVLKKRRSCSNCGNSFCSRCCS 46 (84)
T ss_dssp CCCCSSCSSSCCCCCSSSCCEECSSSCCEECTTTSC
T ss_pred CCCCCcCcCcCCccccchhhhhhcCCCcEEChhhcC
Confidence 34467899999998765443 3589999999976
No 303
>1y02_A CARP2, FYVE-ring finger protein sakura; zinc-binding module, phosphoinositide binding, caspase regulation, metal binding protein; 1.80A {Homo sapiens} SCOP: a.140.2.1 g.50.1.1
Probab=52.26 E-value=6 Score=34.34 Aligned_cols=80 Identities=19% Similarity=0.332 Sum_probs=50.1
Q ss_pred cccccCCCccccccccc---cccccccchhhhhC----CCCcccchHhHhhheeeecCCcEEEecCCchhhhhcChhHHH
Q 011117 69 VHFCVRCDYPIAIYGRL---NPCEHVFCLDCARS----DSMCYLCDERIQKIQTIKLMEGIFICAAPHCLKSFLKKTEFE 141 (493)
Q Consensus 69 vhFCdICdlPI~iygRm---IPCKHVFCydCA~s----DktCP~Cna~VqrIEri~p~esIFIC~~~gCkRtYLSqRDLQ 141 (493)
...|-.|+..|..--|- --|+.+||..|... ..+|-.|-..+..-- +. =.-..|+-+||+
T Consensus 19 ~~~C~~C~~~Fs~~~RkHHCR~CG~ifC~~Cs~~~~~~vRVC~~C~~~~~~~~-----~~--------~~l~~lkvkdL~ 85 (120)
T 1y02_A 19 EPSCKSCGAHFANTARKQTCLDCKKNFCMTCSSQVGNGPRLCLLCQRFRATAF-----QR--------EELMKMKVKDLR 85 (120)
T ss_dssp -CCCTTTCCCCSSGGGCEECTTTCCEECGGGEEC----CCEEHHHHHHHHTTT-----CH--------HHHHTSCHHHHH
T ss_pred cCcccCcCCccccccccccCCCCCCeeCHHHhCCCCCCceECHHHHHHHhccc-----cH--------HHHhcccHHHHH
Confidence 57899999888765443 46899999999872 367888877653211 00 011345667777
Q ss_pred HhhhhhhccccCCccccccc-cc
Q 011117 142 AHIHVSHADLLLQPNAEKED-NE 163 (493)
Q Consensus 142 AHInhrH~~l~Lqpn~~ke~-ne 163 (493)
.-.+.+|... .--.+||| .|
T Consensus 86 ~yL~~~~I~~--~~c~EKedLv~ 106 (120)
T 1y02_A 86 DYLSLHDIST--EMCREKEELVL 106 (120)
T ss_dssp HHHHHTTCCC--TTCCSHHHHHH
T ss_pred HHHHhCCCCc--ccceeHHHHHH
Confidence 6655544433 45567887 44
No 304
>2yw8_A RUN and FYVE domain-containing protein 1; structure genomics, structural genomics, NPPSFA; 3.00A {Homo sapiens} PDB: 2yqm_A
Probab=52.14 E-value=5.2 Score=31.81 Aligned_cols=33 Identities=27% Similarity=0.792 Sum_probs=25.3
Q ss_pred CcccccccCCCccccccccc---cccccccchhhhh
Q 011117 66 GERVHFCVRCDYPIAIYGRL---NPCEHVFCLDCAR 98 (493)
Q Consensus 66 gEKvhFCdICdlPI~iygRm---IPCKHVFCydCA~ 98 (493)
.+....|.+|+..|..-.|- --|+.+||.+|..
T Consensus 16 d~~~~~C~~C~~~Fs~~~RrHHCR~CG~v~C~~Cs~ 51 (82)
T 2yw8_A 16 DDEATHCRQCEKEFSISRRKHHCRNCGHIFCNTCSS 51 (82)
T ss_dssp CCCCCBCTTTCCBCBTTBCCEECTTTCCEECSGGGC
T ss_pred CccCCcccCcCCcccCccccccCCCCCCEEChHHhC
Confidence 34467899999998765443 3588999999987
No 305
>2ghf_A ZHX1, zinc fingers and homeoboxes protein 1; C2H2 zinc fingers, 4-stranded parallel/anti-parallel beta- sheet, structural genomics; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1
Probab=52.03 E-value=4.6 Score=32.92 Aligned_cols=32 Identities=25% Similarity=0.373 Sum_probs=26.9
Q ss_pred eeecCCcEEEecCCchhhhhcChhHHHHhhhhhh
Q 011117 115 TIKLMEGIFICAAPHCLKSFLKKTEFEAHIHVSH 148 (493)
Q Consensus 115 ri~p~esIFIC~~~gCkRtYLSqRDLQAHInhrH 148 (493)
+.+..+..|.|.. |.|+|.+...|..|++..|
T Consensus 11 ~~~~gekpy~C~~--Cgk~F~~~~~L~~H~r~~H 42 (102)
T 2ghf_A 11 QNKKVEGGYECKY--CTFQTPDLNMFTFHVDSEH 42 (102)
T ss_dssp TCCCCCSSEECSS--CSCEESCHHHHHHHHHHHC
T ss_pred ccCCCCcCcCCCC--CCCccCCHHHHHHHHHhhC
Confidence 3456778899875 9999999999999987667
No 306
>3zyq_A Hepatocyte growth factor-regulated tyrosine kinas substrate; signaling; 1.48A {Homo sapiens} PDB: 4avx_A*
Probab=51.77 E-value=3.4 Score=38.23 Aligned_cols=30 Identities=27% Similarity=0.775 Sum_probs=23.8
Q ss_pred cccccCCCcccccccc---ccccccccchhhhh
Q 011117 69 VHFCVRCDYPIAIYGR---LNPCEHVFCLDCAR 98 (493)
Q Consensus 69 vhFCdICdlPI~iygR---mIPCKHVFCydCA~ 98 (493)
...|.+|...|....| .--|.++||.+|..
T Consensus 164 ~~~C~~C~~~F~~~~RrhHCR~CG~v~C~~Cs~ 196 (226)
T 3zyq_A 164 AEECHRCRVQFGVMTRKHHCRACGQIFCGKCSS 196 (226)
T ss_dssp CSBCTTTCCBCBTTBCCEECTTTCCEECTTTCC
T ss_pred CCCCcCcCCCCCccccccccCCCcCEeChhhcC
Confidence 4689999998886654 34588999999986
No 307
>1x63_A Skeletal muscle LIM-protein 1; LIM domain, four and A half LIM domains protein 1, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.39.1.3 g.39.1.3
Probab=50.36 E-value=4.1 Score=30.84 Aligned_cols=10 Identities=30% Similarity=0.494 Sum_probs=5.3
Q ss_pred cccCCCcccc
Q 011117 71 FCVRCDYPIA 80 (493)
Q Consensus 71 FCdICdlPI~ 80 (493)
.|..|+++|.
T Consensus 17 ~C~~C~~~I~ 26 (82)
T 1x63_A 17 KCKGCFKAIV 26 (82)
T ss_dssp BCSSSCCBCC
T ss_pred cCccCCcccc
Confidence 4555555554
No 308
>1b8t_A Protein (CRP1); LIM domain, muscle differentiation, contractIle; NMR {Gallus gallus} SCOP: g.39.1.3 g.39.1.3 g.39.1.3 g.39.1.3 PDB: 1ibi_A 1qli_A 1cxx_A 1ctl_A 2o13_A
Probab=50.22 E-value=5.3 Score=35.22 Aligned_cols=33 Identities=18% Similarity=0.355 Sum_probs=20.9
Q ss_pred CcccchHhHhhheeeecCCcEE-----EecCCchhhhhcC
Q 011117 102 MCYLCDERIQKIQTIKLMEGIF-----ICAAPHCLKSFLK 136 (493)
Q Consensus 102 tCP~Cna~VqrIEri~p~esIF-----IC~~~gCkRtYLS 136 (493)
+|..|...|...+.+..++.+| .| ..|.+.+.+
T Consensus 117 ~C~~C~~~I~~~~~v~a~~~~~H~~CF~C--~~C~~~L~~ 154 (192)
T 1b8t_A 117 GCPRCGQAVYAAEKVIGAGKSWHKSCFRC--AKCGKSLES 154 (192)
T ss_dssp ECTTTSCEECSSSCEEETTEEECTTTCBC--TTTCCBCCS
T ss_pred cCCCCCCEecCcEEEecCCCccchhcCCc--cccCCCCCC
Confidence 3889999887666666666665 33 346555543
No 309
>2xqn_T Testin, TESS; metal-binding protein, cytoskeleton, focal adhesion, acrosom; 2.62A {Homo sapiens}
Probab=50.13 E-value=5.8 Score=32.33 Aligned_cols=60 Identities=18% Similarity=0.441 Sum_probs=35.8
Q ss_pred cccccCCCccccccc-cccccccccc--hhhhhCCCCcccchHhHhhheeeecCCcEEEecCCchhhhh
Q 011117 69 VHFCVRCDYPIAIYG-RLNPCEHVFC--LDCARSDSMCYLCDERIQKIQTIKLMEGIFICAAPHCLKSF 134 (493)
Q Consensus 69 vhFCdICdlPI~iyg-RmIPCKHVFC--ydCA~sDktCP~Cna~VqrIEri~p~esIFIC~~~gCkRtY 134 (493)
...|..|+++|..-. .+.--.++|- .+| .+|-.|+..+........++.+| | ..+|.|.|
T Consensus 63 ~~~C~~C~~~I~~~~~~~~a~~~~~H~~~~C----F~C~~C~~~l~~~~f~~~~~~~y-C-~~~~~~~f 125 (126)
T 2xqn_T 63 AVVCQGCHNAIDPEVQRVTYNNFSWHASTEC----FLCSCCSKCLIGQKFMPVEGMVF-C-SVECKKRM 125 (126)
T ss_dssp CCBCTTTCSBCCTTSCEEEETTEEEESSTTT----SBCTTTCCBCTTSEEEEETTEEE-S-SHHHHHSC
T ss_pred CccCcccCCcCCcCceEEECCCCEeeCCCCC----cCcCCCCCccCCCeeEeECCEEc-c-hHHhhhhc
Confidence 457999999998421 1222244444 444 35667888877666655555565 6 33666655
No 310
>2egq_A FHL1 protein; LIM domain, four and A half LIM domains protein 1, skeletal muscle LIM- protein 1, SLIM 1, structural genomics NPPSFA; NMR {Homo sapiens}
Probab=49.82 E-value=4.7 Score=30.16 Aligned_cols=34 Identities=15% Similarity=0.240 Sum_probs=20.4
Q ss_pred cccchhhhhC--CCCcccchHhHhh----heeeecCCcEE
Q 011117 90 HVFCLDCARS--DSMCYLCDERIQK----IQTIKLMEGIF 123 (493)
Q Consensus 90 HVFCydCA~s--DktCP~Cna~Vqr----IEri~p~esIF 123 (493)
..||.+|+.. ..+|..|+..|.. -+.+..++.+|
T Consensus 3 ~~yC~~cy~~~~~~~C~~C~~~I~~~g~~~~~~~a~~~~~ 42 (77)
T 2egq_A 3 SGSSGDCYKNFVAKKCAGCKNPITGFGKGSSVVAYEGQSW 42 (77)
T ss_dssp SSCCTTCCCSCCCCCCSSSCCCCCCCSSCCCEEEETTEEE
T ss_pred CeEchhHhchhhCccCcccCCcccCCCCCceeEEECccee
Confidence 3577777763 3567777777763 34444455554
No 311
>1zw8_A Zinc-responsive transcriptional regulator ZAP1; interacting C2H2 zinc fingers, beta-BETA-alpha, solution structure; NMR {Saccharomyces cerevisiae}
Probab=49.77 E-value=6.2 Score=29.75 Aligned_cols=28 Identities=18% Similarity=0.191 Sum_probs=26.3
Q ss_pred cEEEecCCchhhhhcChhHHHHhhhhhh
Q 011117 121 GIFICAAPHCLKSFLKKTEFEAHIHVSH 148 (493)
Q Consensus 121 sIFIC~~~gCkRtYLSqRDLQAHInhrH 148 (493)
+-|.|.-.+|.+.+..+.+|-.||+.+|
T Consensus 37 ~~~~C~W~~C~~~~~~~~~L~~Hir~~H 64 (64)
T 1zw8_A 37 EPLACNWEDCDFLGDDTASIVNHINAQH 64 (64)
T ss_dssp CCEECCCSSCCCEESSHHHHHHHHHHHC
T ss_pred CCCEeeCCCCcCCCCChHHHHhhccccC
Confidence 4799999999999999999999999887
No 312
>1zbd_B Rabphilin-3A; G protein, effector, RABCDR, synaptic exocytosis, RAB protein, RAB3A; HET: GTP; 2.60A {Rattus norvegicus} SCOP: g.50.1.1
Probab=49.56 E-value=5.1 Score=35.14 Aligned_cols=54 Identities=22% Similarity=0.612 Sum_probs=30.9
Q ss_pred hcCcccccccCCCccccccccccccccccchhhhhCCCCcccchHhHhhheeeecCCcEEEecC
Q 011117 64 QLGERVHFCVRCDYPIAIYGRLNPCEHVFCLDCARSDSMCYLCDERIQKIQTIKLMEGIFICAA 127 (493)
Q Consensus 64 qlgEKvhFCdICdlPI~iygRmIPCKHVFCydCA~sDktCP~Cna~VqrIEri~p~esIFIC~~ 127 (493)
..++....|.+|..++. .+..++ +.|.+|- ..+|..|...+.. ...+.+++|.+
T Consensus 50 ~~~~~~~~C~~C~~~~g---~l~~~g-~~C~~C~--~~VC~~C~~~~~~----~~~~~~W~C~v 103 (134)
T 1zbd_B 50 VAGDGVNRCILCGEQLG---MLGSAS-VVCEDCK--KNVCTKCGVETSN----NRPHPVWLCKI 103 (134)
T ss_dssp CCSCSSSBCSSSCCBCS---TTSCCE-EECTTTC--CEEETTSEEECCC----SSSSCCEEEHH
T ss_pred hccCCCccccccCCCcc---cccCCC-CCCCCCC--cccccccCCccCC----CCCccceechh
Confidence 45667899999998883 233333 4455552 2445555554421 13456777664
No 313
>1x62_A C-terminal LIM domain protein 1; PDZ and LIM domain protein 1, LIM domain protein CLP-36, contractIle protein, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.39.1.3 g.39.1.3
Probab=49.17 E-value=10 Score=28.83 Aligned_cols=50 Identities=14% Similarity=0.332 Sum_probs=30.7
Q ss_pred cccccCCCccccccccccccccccchhhhhCCCCcccchHhHhhheeeecCCcEE
Q 011117 69 VHFCVRCDYPIAIYGRLNPCEHVFCLDCARSDSMCYLCDERIQKIQTIKLMEGIF 123 (493)
Q Consensus 69 vhFCdICdlPI~iygRmIPCKHVFCydCA~sDktCP~Cna~VqrIEri~p~esIF 123 (493)
...|..|+++|...+ +.--..+|=.+| .+|..|+..+........++.+|
T Consensus 15 ~~~C~~C~~~I~~~~-~~a~~~~~H~~C----F~C~~C~~~L~~~~~~~~~g~~y 64 (79)
T 1x62_A 15 LPMCDKCGTGIVGVF-VKLRDRHRHPEC----YVCTDCGTNLKQKGHFFVEDQIY 64 (79)
T ss_dssp CCCCSSSCCCCCSSC-EECSSCEECTTT----TSCSSSCCCHHHHCCEESSSCEE
T ss_pred CCccccCCCCccCcE-EEECcceeCcCc----CeeCCCCCCCCCCCeEeECCEEE
Confidence 578999999998642 222233333333 35777888887666555555555
No 314
>1wfk_A Zinc finger, FYVE domain containing 19; riken structural genomics/proteomics initiative, RSGI, structural genomics, unknown function; NMR {Mus musculus} SCOP: g.50.1.1
Probab=48.26 E-value=5.2 Score=32.56 Aligned_cols=30 Identities=20% Similarity=0.655 Sum_probs=23.6
Q ss_pred cccccCCCccccccccc---cccccccchhhhh
Q 011117 69 VHFCVRCDYPIAIYGRL---NPCEHVFCLDCAR 98 (493)
Q Consensus 69 vhFCdICdlPI~iygRm---IPCKHVFCydCA~ 98 (493)
+..|.+|...|....|- --|.++||.+|..
T Consensus 9 ~~~C~~C~~~F~~~~RrHHCR~CG~vfC~~Cs~ 41 (88)
T 1wfk_A 9 ESRCYGCAVKFTLFKKEYGCKNCGRAFCNGCLS 41 (88)
T ss_dssp CSBCTTTCCBCCSSSCEEECSSSCCEEETTTSC
T ss_pred CCCCcCcCCcccCccccccCCCCCCEEChhHcC
Confidence 56899999988765443 3589999999986
No 315
>1fv5_A First zinc finger of U-shaped; CCHC, protein interaction, transcription; NMR {Drosophila melanogaster} SCOP: g.37.1.2 PDB: 1y0j_B 2l6z_B
Probab=47.65 E-value=6.8 Score=26.76 Aligned_cols=24 Identities=29% Similarity=0.541 Sum_probs=20.9
Q ss_pred CCcEEEecCCchhhhhcChhHHHHhh
Q 011117 119 MEGIFICAAPHCLKSFLKKTEFEAHI 144 (493)
Q Consensus 119 ~esIFIC~~~gCkRtYLSqRDLQAHI 144 (493)
.|.-|.|. .|.|+|.....|..|+
T Consensus 5 gekp~~C~--~CgK~F~~~s~L~~H~ 28 (36)
T 1fv5_A 5 KPARFMCL--PCGIAFSSPSTLEAHQ 28 (36)
T ss_dssp SCCCCEET--TTTEECSCHHHHHHHH
T ss_pred CccCeECC--CCCCccCCHhHccCcC
Confidence 46679985 5999999999999997
No 316
>1we9_A PHD finger family protein; structural genomics, PHD domain, riken structural genomics/proteomics initiative, RSGI, DNA binding protein; NMR {Arabidopsis thaliana} SCOP: g.50.1.2
Probab=47.53 E-value=6.9 Score=29.28 Aligned_cols=23 Identities=17% Similarity=0.185 Sum_probs=17.0
Q ss_pred cccccccCCCccccccccccccc
Q 011117 67 ERVHFCVRCDYPIAIYGRLNPCE 89 (493)
Q Consensus 67 EKvhFCdICdlPI~iygRmIPCK 89 (493)
+...+|.+|+.+......||=|.
T Consensus 4 ~e~~~C~~C~~~~~~~~~mI~Cd 26 (64)
T 1we9_A 4 GSSGQCGACGESYAADEFWICCD 26 (64)
T ss_dssp SSCCCCSSSCCCCCSSSCEEECS
T ss_pred CCCCCCCCCCCccCCCCCEEEcc
Confidence 34678999999887667777665
No 317
>2ej4_A Zinc finger protein ZIC 3; ZF-C2H2 domain, zinc binding, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=47.42 E-value=4.9 Score=29.75 Aligned_cols=24 Identities=21% Similarity=0.430 Sum_probs=20.2
Q ss_pred CchhhhhcChhHHHHhhhhhhccc
Q 011117 128 PHCLKSFLKKTEFEAHIHVSHADL 151 (493)
Q Consensus 128 ~gCkRtYLSqRDLQAHInhrH~~l 151 (493)
..|.|+|.+..+|..|++..|...
T Consensus 29 ~~C~k~f~~~~~L~~H~~~~H~~~ 52 (95)
T 2ej4_A 29 KSCDRTFSTMHELVTHVTMEHVGG 52 (95)
T ss_dssp CCCCCCCSSHHHHHHHHHHTTTCC
T ss_pred cccccccCCHHHHHHHHHHhccCC
Confidence 479999999999999988767653
No 318
>2lv2_A Insulinoma-associated protein 1; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative; NMR {Homo sapiens}
Probab=47.38 E-value=6.6 Score=31.00 Aligned_cols=31 Identities=26% Similarity=0.506 Sum_probs=25.3
Q ss_pred eecCCcEEEecCCchhhhhcChhHHHHhhhhhh
Q 011117 116 IKLMEGIFICAAPHCLKSFLKKTEFEAHIHVSH 148 (493)
Q Consensus 116 i~p~esIFIC~~~gCkRtYLSqRDLQAHInhrH 148 (493)
+...+..|+|.. |.|+|.+...|..|++.-|
T Consensus 22 ~~~~~~~h~C~~--Cgk~F~~~~~L~~H~~~H~ 52 (85)
T 2lv2_A 22 LSASAECHLCPV--CGESFASKGAQERHLRLLH 52 (85)
T ss_dssp SCCCCTTEECTT--SCCEESSHHHHHHHHHTTS
T ss_pred CCCCCCCEECCC--CCCCcCcHHHHhhhhhhcc
Confidence 445567899865 9999999999999987644
No 319
>1x3h_A Leupaxin; paxillin family, protein-protein interaction, LIM domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.39.1.3 g.39.1.3
Probab=46.81 E-value=4.5 Score=30.45 Aligned_cols=12 Identities=25% Similarity=0.598 Sum_probs=6.6
Q ss_pred ccccCCCccccc
Q 011117 70 HFCVRCDYPIAI 81 (493)
Q Consensus 70 hFCdICdlPI~i 81 (493)
..|..|+++|..
T Consensus 16 ~~C~~C~~~I~~ 27 (80)
T 1x3h_A 16 PKCGGCNRPVLE 27 (80)
T ss_dssp CBCTTTCCBCCS
T ss_pred CccccCCCeecc
Confidence 346666665553
No 320
>2cuq_A Four and A half LIM domains 3; structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.39.1.3 g.39.1.3
Probab=46.79 E-value=5.3 Score=30.07 Aligned_cols=12 Identities=25% Similarity=0.653 Sum_probs=6.4
Q ss_pred ccccCCCccccc
Q 011117 70 HFCVRCDYPIAI 81 (493)
Q Consensus 70 hFCdICdlPI~i 81 (493)
..|..|+++|..
T Consensus 16 ~~C~~C~~~I~~ 27 (80)
T 2cuq_A 16 PRCARCSKTLTQ 27 (80)
T ss_dssp CCCTTTCCCCCS
T ss_pred CcCCCCCCEecC
Confidence 445555555543
No 321
>1weo_A Cellulose synthase, catalytic subunit (IRX3); structure genomics, ring-finger, riken structural genomics/proteomics initiative, RSGI; NMR {Arabidopsis thaliana} SCOP: g.44.1.1
Probab=46.74 E-value=9.4 Score=32.63 Aligned_cols=46 Identities=24% Similarity=0.556 Sum_probs=31.4
Q ss_pred ccccccCCCcccccc------ccccccccccchhhhh-----CCCCcccchHhHhhh
Q 011117 68 RVHFCVRCDYPIAIY------GRLNPCEHVFCLDCAR-----SDSMCYLCDERIQKI 113 (493)
Q Consensus 68 KvhFCdICdlPI~iy------gRmIPCKHVFCydCA~-----sDktCP~Cna~VqrI 113 (493)
...+|-||+..|..- +...=|.--.|-.|+. .++.||+|+.+-.++
T Consensus 15 ~~qiCqiCGD~VG~~~~Ge~FVAC~eC~FPvCrpCyEYErkeG~q~CpqCktrYkr~ 71 (93)
T 1weo_A 15 DGQFCEICGDQIGLTVEGDLFVACNECGFPACRPCYEYERREGTQNCPQCKTRYKRL 71 (93)
T ss_dssp SSCBCSSSCCBCCBCSSSSBCCSCSSSCCCCCHHHHHHHHHTSCSSCTTTCCCCCCC
T ss_pred CCCccccccCccccCCCCCEEEeeeccCChhhHHHHHHHHhccCccccccCCccccc
Confidence 468899998664321 1233355567888887 568999999887643
No 322
>1m3v_A FLIN4, fusion of the LIM interacting domain of LDB1 and the N-terminal LIM domain of LMO4...; fusion protein, LMO proteins, metal binding protein; NMR {Mus musculus} SCOP: g.39.1.3 g.39.1.3
Probab=46.39 E-value=5.1 Score=33.05 Aligned_cols=42 Identities=7% Similarity=-0.044 Sum_probs=30.5
Q ss_pred ccccCCCcccc----ccccccccccccchhhhhC--CC--CcccchHhHhhh
Q 011117 70 HFCVRCDYPIA----IYGRLNPCEHVFCLDCARS--DS--MCYLCDERIQKI 113 (493)
Q Consensus 70 hFCdICdlPI~----iygRmIPCKHVFCydCA~s--Dk--tCP~Cna~VqrI 113 (493)
+.|..|+.+|. .++.. =..+||..|+.. .. +|..|+..|..-
T Consensus 33 F~C~~C~~~L~~~~~~~~~~--~g~~yC~~cy~~~f~~~~~C~~C~~~I~~~ 82 (122)
T 1m3v_A 33 LKCSSCQAQLGDIGTSSYTK--SGMILCRNDYIRLFGNSGAGGSGGHMGSGG 82 (122)
T ss_dssp HCCSSSCCCTTTSEECCEEE--TTEEECHHHHHHHHCCCCSSSCSSCCSCCE
T ss_pred CCcCCCCCcccccCCeEEEE--CCeeecHHHHHHHcCCCCccccCCCCcCch
Confidence 58999999985 23221 256799999982 23 899999999753
No 323
>2ct7_A Ring finger protein 31; IBR, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.44.1.4
Probab=46.29 E-value=7.7 Score=30.91 Aligned_cols=31 Identities=26% Similarity=0.914 Sum_probs=20.8
Q ss_pred ccccccCCCcccccccc---cc-c-cccccchhhhh
Q 011117 68 RVHFCVRCDYPIAIYGR---LN-P-CEHVFCLDCAR 98 (493)
Q Consensus 68 KvhFCdICdlPI~iygR---mI-P-CKHVFCydCA~ 98 (493)
+...|+.|...|..... +. | |++.||..|-.
T Consensus 24 ~~~wCP~C~~~~~~~~~~~~v~C~~C~~~FC~~C~~ 59 (86)
T 2ct7_A 24 KFLWCAQCSFGFIYEREQLEATCPQCHQTFCVRCKR 59 (86)
T ss_dssp CEECCSSSCCCEECCCSCSCEECTTTCCEECSSSCS
T ss_pred CEeECcCCCchheecCCCCceEeCCCCCccccccCC
Confidence 35679999876543221 22 2 89999999986
No 324
>2gqj_A Zinc finger protein KIAA1196; ZF-C2H2 like domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=44.82 E-value=4.3 Score=31.21 Aligned_cols=33 Identities=15% Similarity=0.246 Sum_probs=26.4
Q ss_pred eeecCCcEEEecCCchhhhhc-ChhHHHHhhhhhhc
Q 011117 115 TIKLMEGIFICAAPHCLKSFL-KKTEFEAHIHVSHA 149 (493)
Q Consensus 115 ri~p~esIFIC~~~gCkRtYL-SqRDLQAHInhrH~ 149 (493)
+++..+.-|.|. .|.|.|. +...|+.|++.-|.
T Consensus 17 ~~h~~~~~~~C~--~C~k~f~~~~~~L~~H~~~h~~ 50 (98)
T 2gqj_A 17 RAIHERGEAVCP--TCNVVTRKTLVGLKKHMEVCQK 50 (98)
T ss_dssp HTTTTTSCCCCT--TTCCCCSSCSHHHHHHHHHHHH
T ss_pred HHhccCCCcCCC--CCCCChhhhHHHHHHHHHHHcC
Confidence 345567789987 5999999 99999999976554
No 325
>2d8x_A Protein pinch; LIM domain, pinch protein, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.39.1.3 g.39.1.3
Probab=44.78 E-value=7.4 Score=28.64 Aligned_cols=50 Identities=20% Similarity=0.323 Sum_probs=27.7
Q ss_pred cccccCCCccccccccccccccccchhhhhCCCCcccchHhHhhheeeecCCcEE
Q 011117 69 VHFCVRCDYPIAIYGRLNPCEHVFCLDCARSDSMCYLCDERIQKIQTIKLMEGIF 123 (493)
Q Consensus 69 vhFCdICdlPI~iygRmIPCKHVFCydCA~sDktCP~Cna~VqrIEri~p~esIF 123 (493)
...|..|+++|...+ +.--...|-.+| .+|..|+..+........++.+|
T Consensus 5 ~~~C~~C~~~I~~~~-~~a~~~~~H~~C----F~C~~C~~~L~~~~f~~~~g~~y 54 (70)
T 2d8x_A 5 SSGCHQCGEFIIGRV-IKAMNNSWHPEC----FRCDLCQEVLADIGFVKNAGRHL 54 (70)
T ss_dssp SSBCSSSCCBCCSCC-EEETTEEECTTT----SBCSSSCCBCSSSCCEEETTEEE
T ss_pred CCcCccCCCEecceE-EEECcccccccC----CEeCCCCCcCCCCccEeECCeEE
Confidence 357999999987533 222233333343 35667877776655443333443
No 326
>2ri7_A Nucleosome-remodeling factor subunit BPTF; zinc finger, alpha-helical bundle, dimethyl-lysine, bromodom chromatin regulator, metal-binding, nucleus; HET: MLY; 1.45A {Homo sapiens} PDB: 2fsa_A* 2f6n_A 2f6j_A* 3qzv_A* 3uv2_A* 3qzt_A* 3qzs_A* 2fui_A 2fuu_A*
Probab=43.67 E-value=8.5 Score=33.48 Aligned_cols=43 Identities=16% Similarity=0.424 Sum_probs=29.7
Q ss_pred ccccccCCCccccccccccccc---cccchhhhh---------CCCCcccchHhHh
Q 011117 68 RVHFCVRCDYPIAIYGRLNPCE---HVFCLDCAR---------SDSMCYLCDERIQ 111 (493)
Q Consensus 68 KvhFCdICdlPI~iygRmIPCK---HVFCydCA~---------sDktCP~Cna~Vq 111 (493)
...+| +|+.+....+.||-|- ..|-..|.. .+..|+.|...-.
T Consensus 7 ~~~~C-~C~~~~~~~~~mi~Cd~C~~WfH~~Cv~~~~~~~~~~~~~~C~~C~~~~~ 61 (174)
T 2ri7_A 7 TKLYC-ICKTPEDESKFYIGCDRCQNWYHGRCVGILQSEAELIDEYVCPQCQSTED 61 (174)
T ss_dssp CCEET-TTTEECCTTSCEEECTTTCCEEEHHHHTCCHHHHTTCSSCCCHHHHHHHH
T ss_pred CCcEe-eCCCCCCCCCCEeECCCCCchhChhhcCCchhhccCccCeecCCCcchhc
Confidence 46789 9999876667777664 345566664 2367999987653
No 327
>2cot_A Zinc finger protein 435; ADK_LID domain, zinc finger and SCAN domain containing protein 16, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1
Probab=42.13 E-value=5.6 Score=28.74 Aligned_cols=27 Identities=22% Similarity=0.437 Sum_probs=22.6
Q ss_pred cCCcEEEecCCchhhhhcChhHHHHhhhh
Q 011117 118 LMEGIFICAAPHCLKSFLKKTEFEAHIHV 146 (493)
Q Consensus 118 p~esIFIC~~~gCkRtYLSqRDLQAHInh 146 (493)
..+..|.|.. |.+.|.+..+|+.|++.
T Consensus 14 ~~~~~~~C~~--C~~~f~~~~~l~~H~~~ 40 (77)
T 2cot_A 14 RERRRYKCDE--CGKSFSHSSDLSKHRRT 40 (77)
T ss_dssp CCSCSSBCSS--SCCBCSCHHHHHHHHTT
T ss_pred CCCCCEECCC--CCcccCCHHHHHHHHHH
Confidence 3456788875 99999999999999864
No 328
>2jtn_A LIM domain-binding protein 1, LIM/homeobox protein LHX3; intramolecular (fusion) protein-protein complex, protein binding/transcription complex; NMR {Mus musculus}
Probab=41.45 E-value=7.5 Score=33.95 Aligned_cols=44 Identities=27% Similarity=0.468 Sum_probs=27.5
Q ss_pred ccccCCCccccccccccccccccchhhhhC--CCCcccchHhHhhhe
Q 011117 70 HFCVRCDYPIAIYGRLNPCEHVFCLDCARS--DSMCYLCDERIQKIQ 114 (493)
Q Consensus 70 hFCdICdlPI~iygRmIPCKHVFCydCA~s--DktCP~Cna~VqrIE 114 (493)
+.|..|+.+|..-. ..-=...||..|+.. ..+|..|+..|...+
T Consensus 88 F~C~~C~~~L~~~~-f~~~g~~yC~~~y~~~f~~kC~~C~~~I~~~~ 133 (182)
T 2jtn_A 88 LKCSDCHVPLAERC-FSRGESVYCKDDFFKRFGTKCAACQLGIPPTQ 133 (182)
T ss_dssp TSCTTTCCCCSSCC-EEETTEEECHHHHHHTTSCCCTTTCCCCCSSC
T ss_pred CccCCCCCccCCCc-eeECCEeeecCccccccccccccCCCccCCCc
Confidence 56777777665321 111145688888873 368999998886543
No 329
>2zet_C Melanophilin; complex, GTP-binding protein, GTPase, G-protein, RAB, RAB27B, effector, SLP homology domain, acetylation, lipoprotein, membrane; HET: GTP; 3.00A {Mus musculus}
Probab=41.23 E-value=9.8 Score=34.08 Aligned_cols=14 Identities=29% Similarity=0.695 Sum_probs=11.2
Q ss_pred ccccccCCCccccc
Q 011117 68 RVHFCVRCDYPIAI 81 (493)
Q Consensus 68 KvhFCdICdlPI~i 81 (493)
....|.+|..+|.-
T Consensus 67 ~~~~C~~C~~~fg~ 80 (153)
T 2zet_C 67 NETHCARCLQPYRL 80 (153)
T ss_dssp GGTBCTTTCCBGGG
T ss_pred CCccchhhcCcccc
Confidence 47999999988653
No 330
>2ctd_A Zinc finger protein 512; zinc binding, two ZF-C2H2 domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1
Probab=39.79 E-value=6.5 Score=30.82 Aligned_cols=28 Identities=14% Similarity=0.254 Sum_probs=23.1
Q ss_pred ecCCcEEEecCCchhhhh-cChhHHHHhhhh
Q 011117 117 KLMEGIFICAAPHCLKSF-LKKTEFEAHIHV 146 (493)
Q Consensus 117 ~p~esIFIC~~~gCkRtY-LSqRDLQAHInh 146 (493)
+..+.-|.|.. |.|+| .+..+|+.|++.
T Consensus 29 ~~~~~~~~C~~--C~k~F~~~~~~L~~H~~~ 57 (96)
T 2ctd_A 29 IVDKGSVSCPT--CQAVGRKTIEGLKKHMEN 57 (96)
T ss_dssp HHHTSCEECTT--TCSCEESSHHHHHHHHHH
T ss_pred hcCCCCcCCCC--CCCCcccCHHHHHHHHHH
Confidence 33567799875 99999 999999999864
No 331
>1x68_A FHL5 protein; four-and-A-half LIM protein 5, zinc finger domain, AN actin- interacting protein, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.39.1.3 g.39.1.3
Probab=39.73 E-value=14 Score=27.69 Aligned_cols=50 Identities=20% Similarity=0.299 Sum_probs=24.9
Q ss_pred cccccCCCccccc----cccccccccccchhhhhCCCCcccchHhHhhheeeecCCcEE
Q 011117 69 VHFCVRCDYPIAI----YGRLNPCEHVFCLDCARSDSMCYLCDERIQKIQTIKLMEGIF 123 (493)
Q Consensus 69 vhFCdICdlPI~i----ygRmIPCKHVFCydCA~sDktCP~Cna~VqrIEri~p~esIF 123 (493)
...|..|+++|.. .+ +.--...|=.+| .+|..|+..+........++.||
T Consensus 5 ~~~C~~C~~~I~~~g~~~~-~~a~~~~wH~~C----F~C~~C~~~L~~~~f~~~~g~~y 58 (76)
T 1x68_A 5 SSGCVACSKPISGLTGAKF-ICFQDSQWHSEC----FNCGKCSVSLVGKGFLTQNKEIF 58 (76)
T ss_dssp CCCCTTTCCCCCTTTTCCE-EEETTEEEEGGG----CBCTTTCCBCSSSCEEEETTEEE
T ss_pred CCCCccCCCcccCCCCcee-EEECCcccCccc----CChhhCCCcCCCCceEeECCEEE
Confidence 4578999998884 11 111122222233 24556766665444443333343
No 332
>2xb1_A Pygopus homolog 2, B-cell CLL/lymphoma 9-like Pro; fusion protein, signal transduction, transcription, metal BI WNT proteins; 1.90A {Homo sapiens}
Probab=39.05 E-value=7.2 Score=32.59 Aligned_cols=43 Identities=23% Similarity=0.372 Sum_probs=29.7
Q ss_pred cccccCCCccccccccccccc----cccchhhhh--------------CCCCcccchHhHh
Q 011117 69 VHFCVRCDYPIAIYGRLNPCE----HVFCLDCAR--------------SDSMCYLCDERIQ 111 (493)
Q Consensus 69 vhFCdICdlPI~iygRmIPCK----HVFCydCA~--------------sDktCP~Cna~Vq 111 (493)
+..|.+|..++...+.||=|- .-|=++|.. ....|+.|.....
T Consensus 3 ~~~C~iC~~p~~~~~~mi~Cdd~C~~WfH~~CVglt~~~~~~i~~~~~~~~~Cp~C~~~~~ 63 (105)
T 2xb1_A 3 VYPCGACRSEVNDDQDAILCEASCQKWFHRECTGMTESAYGLLTTEASAVWACDLCLKTKE 63 (105)
T ss_dssp CCBCTTTCSBCCTTSCEEECTTTTCCEEEGGGTTCCHHHHHHHHHCTTEEECCHHHHHTTT
T ss_pred cCCCCCCCCccCCCCCEEEecCCcccccccccCCcCHHHHHhhccCCCCCEECccccCcCC
Confidence 568999999998888887554 334456664 1256888877654
No 333
>2fc7_A ZZZ3 protein; structure genomics, ZZ domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.44.1.6
Probab=38.45 E-value=13 Score=30.15 Aligned_cols=31 Identities=26% Similarity=0.595 Sum_probs=24.0
Q ss_pred cccccCCCc-ccc-cccccccccc----ccchhhhhC
Q 011117 69 VHFCVRCDY-PIA-IYGRLNPCEH----VFCLDCARS 99 (493)
Q Consensus 69 vhFCdICdl-PI~-iygRmIPCKH----VFCydCA~s 99 (493)
...|+.|+. ||. ++++-.-|.- -+|.+|+..
T Consensus 21 ~~~Cd~C~~~pI~G~RykC~~C~d~~~yDLC~~C~~~ 57 (82)
T 2fc7_A 21 GFKCDNCGIEPIQGVRWHCQDCPPEMSLDFCDSCSDC 57 (82)
T ss_dssp SCCCSSSCCSSEESCEEEESSSCSSSCCEEEGGGTTC
T ss_pred cCCCCCCCCCcceeceEECCcCCCCcceecHHHHHhC
Confidence 568999995 775 7888888875 488888863
No 334
>2iyb_E Testin, TESS, TES; LIM domain, SH3-binding, tumour supressor LIM domain EVH1 DO cell motility, phosphorylation, cytoskeleton; 2.35A {Homo sapiens}
Probab=38.29 E-value=11 Score=27.67 Aligned_cols=50 Identities=14% Similarity=0.339 Sum_probs=26.2
Q ss_pred ccccCCCcccccccc-ccccccccc--hhhhhCCCCcccchHhHhhheeeecCCcEE
Q 011117 70 HFCVRCDYPIAIYGR-LNPCEHVFC--LDCARSDSMCYLCDERIQKIQTIKLMEGIF 123 (493)
Q Consensus 70 hFCdICdlPI~iygR-mIPCKHVFC--ydCA~sDktCP~Cna~VqrIEri~p~esIF 123 (493)
..|..|+++|..-.+ +.--...|= .+| .+|-.|+..+........++.+|
T Consensus 3 ~~C~~C~~~I~~~~~~v~a~~~~wH~~~~C----F~C~~C~~~L~~~~f~~~~g~~y 55 (65)
T 2iyb_E 3 VVCQGCHNAIDPEVQRVTYNNFSWHASTEC----FLCSCCSKCLIGQKFMPVEGMVF 55 (65)
T ss_dssp EECTTTSSEECTTSCEEEETTEEEETTTTT----SBCTTTCCBCTTSCCEEETTEEE
T ss_pred CCCcCCCCeeccCceEEEECCCccCCCCCC----EECCCCCCcCCCCceEEECCEEe
Confidence 358899998883211 111122222 222 34566777766555555555555
No 335
>3mjh_B Early endosome antigen 1; protein-zinc finger complex, beta BETA alpha fold, beta HAIR RAB5A GTPase, EEA1, protein transport; HET: GTP; 2.03A {Homo sapiens}
Probab=37.91 E-value=14 Score=26.24 Aligned_cols=27 Identities=37% Similarity=0.684 Sum_probs=23.5
Q ss_pred EEecCCchhhhhcChhHHHHhhhhhhccc
Q 011117 123 FICAAPHCLKSFLKKTEFEAHIHVSHADL 151 (493)
Q Consensus 123 FIC~~~gCkRtYLSqRDLQAHInhrH~~l 151 (493)
|+| +.|+|.|-+...|+.|-...|...
T Consensus 6 FiC--P~C~~~l~s~~~L~~Hye~~H~~~ 32 (34)
T 3mjh_B 6 FIC--PQCMKSLGSADELFKHYEAVHDAG 32 (34)
T ss_dssp EEC--TTTCCEESSHHHHHHHHHHHTSSS
T ss_pred cCC--cHHHHHcCCHHHHHHHHHhccccC
Confidence 886 469999999999999999888653
No 336
>2pv0_B DNA (cytosine-5)-methyltransferase 3-like; DNMT3L, unmethylated H3K4, de novo DNA methylation, transferase regulator; HET: DNA; 3.30A {Homo sapiens} PDB: 2pvc_B*
Probab=36.94 E-value=20 Score=36.69 Aligned_cols=63 Identities=21% Similarity=0.559 Sum_probs=38.5
Q ss_pred cccccCCCcccccccccccccc-ccchhhhh-------------CCCCcccchHhHhhheeeecCCcEEEecCCchhhhh
Q 011117 69 VHFCVRCDYPIAIYGRLNPCEH-VFCLDCAR-------------SDSMCYLCDERIQKIQTIKLMEGIFICAAPHCLKSF 134 (493)
Q Consensus 69 vhFCdICdlPI~iygRmIPCKH-VFCydCA~-------------sDktCP~Cna~VqrIEri~p~esIFIC~~~gCkRtY 134 (493)
..+|..|+.. .+ ....|=.. ..|.+|.. .+.-|-.|-+ .++|++|..+.|.|.|
T Consensus 50 e~~C~~CG~~-~~-~~~HPl~~v~lC~~Ck~~y~~~~f~~D~DG~~~yCr~C~~----------Gg~l~~Cdn~~C~r~F 117 (386)
T 2pv0_B 50 EDICICCGSL-QV-HTQHPLFEGGICAPCKDKFLDALFLYDDDGYQSYCSICCS----------GETLLICGNPDCTRCY 117 (386)
T ss_dssp GGSBTTTCCS-CC-CSBCSSBSSBCCHHHHHHHHTTTTCBCSSSSBCSCTTTCC----------CSSCEECCSTTCCCEE
T ss_pred cceeCCCCCc-Cc-cccCCCcCcchhhHHHHHHhccCcccCCCCCcccceEcCC----------CCeEEEeCCCCCCcch
Confidence 5799999965 11 11111111 36777775 2245777753 4789999988887777
Q ss_pred cChhHHHHhh
Q 011117 135 LKKTEFEAHI 144 (493)
Q Consensus 135 LSqRDLQAHI 144 (493)
= ...+..++
T Consensus 118 C-~~Ci~~n~ 126 (386)
T 2pv0_B 118 C-FECVDSLV 126 (386)
T ss_dssp C-HHHHHHHT
T ss_pred H-HHHHHHhc
Confidence 6 45555554
No 337
>4gzn_C ZFP-57, zinc finger protein 57; transcription-DNA complex; HET: DNA 5CM; 0.99A {Mus musculus}
Probab=36.86 E-value=14 Score=27.38 Aligned_cols=29 Identities=24% Similarity=0.497 Sum_probs=22.8
Q ss_pred CcEEEecCCchhhhhcChhHHHHhhhhhhccc
Q 011117 120 EGIFICAAPHCLKSFLKKTEFEAHIHVSHADL 151 (493)
Q Consensus 120 esIFIC~~~gCkRtYLSqRDLQAHInhrH~~l 151 (493)
|.=|.|.. |.|+|....+|..|++. |..-
T Consensus 2 EKpy~C~~--C~k~F~~~~~L~~H~~~-Ht~e 30 (60)
T 4gzn_C 2 ERPFFCNF--CGKTYRDASGLSRHRRA-HLGY 30 (60)
T ss_dssp CCCEECTT--TCCEESSHHHHHHHHHH-HHTC
T ss_pred CCCccCCC--CCCEeCCHHHHHHHHHH-hCCC
Confidence 34588865 99999999999999854 6543
No 338
>1x64_A Alpha-actinin-2 associated LIM protein; LIM domain, PDZ and LIM domain 3, structural genomics, NPPSFA; NMR {Mus musculus} SCOP: g.39.1.3 g.39.1.3
Probab=36.81 E-value=14 Score=28.52 Aligned_cols=50 Identities=12% Similarity=0.309 Sum_probs=28.5
Q ss_pred cccccCCCccccccccccccccccchhhhhCCCCcccchHhHhhheeeecCCcEE
Q 011117 69 VHFCVRCDYPIAIYGRLNPCEHVFCLDCARSDSMCYLCDERIQKIQTIKLMEGIF 123 (493)
Q Consensus 69 vhFCdICdlPI~iygRmIPCKHVFCydCA~sDktCP~Cna~VqrIEri~p~esIF 123 (493)
...|..|+++|...+ +.--...|=.+| .+|-.|+..+........++.+|
T Consensus 25 ~~~C~~C~~~I~~~~-~~a~~~~~H~~C----F~C~~C~~~L~~~~~~~~~g~~y 74 (89)
T 1x64_A 25 MPLCDKCGSGIVGAV-VKARDKYRHPEC----FVCADCNLNLKQKGYFFVEGELY 74 (89)
T ss_dssp CCBCTTTCCBCCSCC-EESSSCEECTTT----CCCSSSCCCTTTSCCEEETTEEE
T ss_pred CCCcccCCCEecccE-EEECCceECccC----CEecCCCCCCCCCCeEeECCEEE
Confidence 578999999998633 221222333333 35667877776655444444444
No 339
>1x6f_A Zinc finger protein 462; zinc finger domain, KIAA1803, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1
Probab=36.78 E-value=13 Score=29.09 Aligned_cols=31 Identities=19% Similarity=0.555 Sum_probs=25.1
Q ss_pred eecCCcEEEecCCchhhhhcChhHHHHhhhhhhc
Q 011117 116 IKLMEGIFICAAPHCLKSFLKKTEFEAHIHVSHA 149 (493)
Q Consensus 116 i~p~esIFIC~~~gCkRtYLSqRDLQAHInhrH~ 149 (493)
++..+.-|.|.. |.|+|....+|..|+.. |.
T Consensus 19 ~H~~~kpy~C~~--C~k~F~~~~~L~~H~~~-Ht 49 (88)
T 1x6f_A 19 PRLQNSTYQCKH--CDSKLQSTAELTSHLNI-HN 49 (88)
T ss_dssp SCCCCSCEECSS--SCCEESSHHHHHHHHHH-HH
T ss_pred ccCCCCCCcCCC--CCCEeCCHHHHHHHHHH-hC
Confidence 455677899875 99999999999999864 43
No 340
>2jrp_A Putative cytoplasmic protein; two-zinc binding protein, structural genomics, PSI-2, protein structure initiative; NMR {Salmonella typhimurium LT2}
Probab=36.34 E-value=4.9 Score=33.35 Aligned_cols=36 Identities=25% Similarity=0.597 Sum_probs=23.3
Q ss_pred cccccCCCccccccccccccccccchhhhh----------CCCCcccchHhHhh
Q 011117 69 VHFCVRCDYPIAIYGRLNPCEHVFCLDCAR----------SDSMCYLCDERIQK 112 (493)
Q Consensus 69 vhFCdICdlPI~iygRmIPCKHVFCydCA~----------sDktCP~Cna~Vqr 112 (493)
.+.|..|++.|.. .+||-+|-. .++.|..|++.|.+
T Consensus 18 ~~~C~~C~~~~~~--------~afCPeCgq~Le~lkACGA~~yFC~~C~~LiSk 63 (81)
T 2jrp_A 18 TAHCETCAKDFSL--------QALCPDCRQPLQVLKACGAVDYFCQNGHGLISK 63 (81)
T ss_dssp EEECTTTCCEEEE--------EEECSSSCSCCCEEEETTEEEECCTTTTCCCCT
T ss_pred ceECccccccCCC--------cccCcchhhHHHHHHhcCCcCeeeccCCCEeec
Confidence 3447777765543 346666654 56888999888864
No 341
>2jmo_A Parkin; IBR, E3 ligase, zinc binding domain, RBR; NMR {Homo sapiens}
Probab=36.19 E-value=17 Score=28.74 Aligned_cols=32 Identities=22% Similarity=0.595 Sum_probs=21.3
Q ss_pred cccccC--CCcccccc---cccc-------ccccccchhhhhCC
Q 011117 69 VHFCVR--CDYPIAIY---GRLN-------PCEHVFCLDCARSD 100 (493)
Q Consensus 69 vhFCdI--CdlPI~iy---gRmI-------PCKHVFCydCA~sD 100 (493)
...|+. |+..|..- .+++ -|+++||..|-..-
T Consensus 25 ~~~CP~p~C~~~v~~~~~~~~v~C~~~~~~~C~~~FC~~C~~~w 68 (80)
T 2jmo_A 25 GVLCPRPGCGAGLLPEPDQRKVTCEGGNGLGCGFAFCRECKEAY 68 (80)
T ss_dssp SCCCCSSSCCCCCCCCSCTTSBCTTSSSTTCCSCCEETTTTEEC
T ss_pred cEECCCCCCCcccEECCCCCcCCCCCCCCCCCCCeeccccCccc
Confidence 567888 88665432 1222 27899999999843
No 342
>2epp_A POZ-, at HOOK-, and zinc finger-containing protein 1; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1
Probab=35.91 E-value=10 Score=29.04 Aligned_cols=29 Identities=28% Similarity=0.471 Sum_probs=23.4
Q ss_pred CCcEEEecCCchhhhhcChhHHHHhhhhhhcc
Q 011117 119 MEGIFICAAPHCLKSFLKKTEFEAHIHVSHAD 150 (493)
Q Consensus 119 ~esIFIC~~~gCkRtYLSqRDLQAHInhrH~~ 150 (493)
.+.-|.|. .|.|.|.....|..|++. |..
T Consensus 10 ~ekpy~C~--~CgK~F~~~s~L~~H~r~-Htg 38 (66)
T 2epp_A 10 EAGILPCG--LCGKVFTDANRLRQHEAQ-HGV 38 (66)
T ss_dssp CCCCCCCT--TTCCCCSCHHHHHHHHHH-HTT
T ss_pred CccCcCCC--CCCCccCCHHHHHhhhhh-hCC
Confidence 45678885 599999999999999865 543
No 343
>1llm_C Chimera of ZIF23-GCN4; dimerization, DNA recognition, leucine zipper, X-RAY crystallography, structure-based design, zinc fingers; 1.50A {Mus musculus} SCOP: g.37.1.1 g.37.1.1 PDB: 1xf7_A
Probab=35.72 E-value=11 Score=27.74 Aligned_cols=36 Identities=22% Similarity=0.367 Sum_probs=28.3
Q ss_pred hheeeecCCcEEEecCCchhhhhcChhHHHHhhhhhhc
Q 011117 112 KIQTIKLMEGIFICAAPHCLKSFLKKTEFEAHIHVSHA 149 (493)
Q Consensus 112 rIEri~p~esIFIC~~~gCkRtYLSqRDLQAHInhrH~ 149 (493)
.-.+++..+..|.|.. |.++|.+..+|..|++..|.
T Consensus 21 ~H~~~H~~~~~~~C~~--C~k~f~~~~~L~~H~~~h~~ 56 (88)
T 1llm_C 21 THIRTHTGEKPFACDI--CGRKFARSDERKRHRDIQHI 56 (88)
T ss_dssp HHHHHHHCCCCEECTT--TCCEESSHHHHHHHHHHHTH
T ss_pred HHHHHcCCCCCccCCC--CCCccCCHHHHHHHHHHhCC
Confidence 3334565677899875 99999999999999977664
No 344
>2cu8_A Cysteine-rich protein 2; CRP2, CRIP2, ESP1 protein, zinc-binding, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.39.1.3 g.39.1.3
Probab=35.68 E-value=11 Score=28.29 Aligned_cols=51 Identities=14% Similarity=0.269 Sum_probs=27.3
Q ss_pred cccccCCCccccccccccccccccchhhhhCCCCcccchHhHhhheeeecCCcEE
Q 011117 69 VHFCVRCDYPIAIYGRLNPCEHVFCLDCARSDSMCYLCDERIQKIQTIKLMEGIF 123 (493)
Q Consensus 69 vhFCdICdlPI~iygRmIPCKHVFCydCA~sDktCP~Cna~VqrIEri~p~esIF 123 (493)
...|..|+++|.....+.--..+|-.+| .+|..|+..+........++.+|
T Consensus 9 ~~~C~~C~~~I~~~~~v~a~~~~~H~~C----F~C~~C~~~L~~~~~~~~~g~~y 59 (76)
T 2cu8_A 9 ASKCPKCDKTVYFAEKVSSLGKDWHKFC----LKCERCSKTLTPGGHAEHDGKPF 59 (76)
T ss_dssp CCBCTTTCCBCCTTTEEEETTEEEETTT----CBCSSSCCBCCTTSCEEETTEEE
T ss_pred CCCCcCCCCEeECCeEEEECCeEeeCCC----CCCCCCCCccCCCceEeECCEEe
Confidence 4579999999873322322232333333 34666777766544444444454
No 345
>1x4l_A Skeletal muscle LIM-protein 3; LIM domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.39.1.3 g.39.1.3
Probab=35.44 E-value=17 Score=26.73 Aligned_cols=48 Identities=19% Similarity=0.281 Sum_probs=26.6
Q ss_pred cccccCCCccccc----cc-cc-cccccccchhhhhCCCCcccchHhHhhheeeecCCcEE
Q 011117 69 VHFCVRCDYPIAI----YG-RL-NPCEHVFCLDCARSDSMCYLCDERIQKIQTIKLMEGIF 123 (493)
Q Consensus 69 vhFCdICdlPI~i----yg-Rm-IPCKHVFCydCA~sDktCP~Cna~VqrIEri~p~esIF 123 (493)
...|..|+++|.. .+ +. -=..|.-|. +|..|+..+........++.||
T Consensus 5 ~~~C~~C~~~I~~~~~~~~~~a~~~~wH~~CF-------~C~~C~~~L~~~~f~~~~g~~y 58 (72)
T 1x4l_A 5 SSGCAGCTNPISGLGGTKYISFEERQWHNDCF-------NCKKCSLSLVGRGFLTERDDIL 58 (72)
T ss_dssp SCSBTTTTBCCCCSSSCSCEECSSCEECTTTC-------BCSSSCCBCTTSCCEECSSSEE
T ss_pred CCCCcCCCccccCCCCcceEEECCcccCcccC-------EeccCCCcCCCCccEeECCEEE
Confidence 3579999999984 21 11 112344443 4556777666555444455555
No 346
>2d8z_A Four and A half LIM domains 2; skeletal muscle LIM-protein 3, LIM-domain protein DRAL, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.39.1.3 g.39.1.3
Probab=35.30 E-value=20 Score=26.13 Aligned_cols=50 Identities=20% Similarity=0.431 Sum_probs=26.5
Q ss_pred cccccCCCccccccccccccccccchhhhhCCCCcccchHhHhhheeeecCCcEE
Q 011117 69 VHFCVRCDYPIAIYGRLNPCEHVFCLDCARSDSMCYLCDERIQKIQTIKLMEGIF 123 (493)
Q Consensus 69 vhFCdICdlPI~iygRmIPCKHVFCydCA~sDktCP~Cna~VqrIEri~p~esIF 123 (493)
...|..|+++|.... +.--...|=.+| .+|..|+..+........++.+|
T Consensus 5 ~~~C~~C~~~I~~~~-~~a~~~~~H~~C----F~C~~C~~~L~~~~~~~~~~~~y 54 (70)
T 2d8z_A 5 SSGCVQCKKPITTGG-VTYREQPWHKEC----FVCTACRKQLSGQRFTARDDFAY 54 (70)
T ss_dssp CCBCSSSCCBCCSSE-EESSSSEEETTT----SBCSSSCCBCTTSCCEESSSSEE
T ss_pred CCCCcccCCeeccce-EEECccccCCCC----CccCCCCCcCCcCceEeeCCeEE
Confidence 357999999887532 222222222222 35666777665544444444554
No 347
>2dar_A PDZ and LIM domain protein 5; enigma homolog protein, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.39.1.3 g.39.1.3
Probab=35.18 E-value=18 Score=27.98 Aligned_cols=50 Identities=12% Similarity=0.203 Sum_probs=26.7
Q ss_pred cccccCCCccccccccccccccccchhhhhCCCCcccchHhHhhheeeecCCcEE
Q 011117 69 VHFCVRCDYPIAIYGRLNPCEHVFCLDCARSDSMCYLCDERIQKIQTIKLMEGIF 123 (493)
Q Consensus 69 vhFCdICdlPI~iygRmIPCKHVFCydCA~sDktCP~Cna~VqrIEri~p~esIF 123 (493)
...|..|+++|...+. .--...|-.+| .+|..|+..+........++.+|
T Consensus 25 ~~~C~~C~~~I~~~~v-~a~~~~~H~~C----F~C~~C~~~L~~~~f~~~~g~~y 74 (90)
T 2dar_A 25 TPMCAHCNQVIRGPFL-VALGKSWHPEE----FNCAHCKNTMAYIGFVEEKGALY 74 (90)
T ss_dssp CCBBSSSCCBCCSCEE-EETTEEECTTT----CBCSSSCCBCSSSCBEESSSCEE
T ss_pred CCCCccCCCEecceEE-EECCccccccC----CccCCCCCCCCCCEeEeECCEEE
Confidence 5679999998854321 11222232222 35666777766554444444444
No 348
>2cur_A Skeletal muscle LIM-protein 1; four and A half LIM domains protein 1, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.39.1.3 g.39.1.3
Probab=34.54 E-value=17 Score=26.56 Aligned_cols=50 Identities=18% Similarity=0.489 Sum_probs=27.3
Q ss_pred cccccCCCccccccccccccccccchhhhhCCCCcccchHhHhhheeeecCCcEE
Q 011117 69 VHFCVRCDYPIAIYGRLNPCEHVFCLDCARSDSMCYLCDERIQKIQTIKLMEGIF 123 (493)
Q Consensus 69 vhFCdICdlPI~iygRmIPCKHVFCydCA~sDktCP~Cna~VqrIEri~p~esIF 123 (493)
...|..|+++|.... +.-=...|-.+| .+|..|+..+........++.+|
T Consensus 5 ~~~C~~C~~~I~~~~-~~a~~~~~H~~C----F~C~~C~~~L~~~~~~~~~~~~y 54 (69)
T 2cur_A 5 SSGCVKCNKAITSGG-ITYQDQPWHADC----FVCVTCSKKLAGQRFTAVEDQYY 54 (69)
T ss_dssp CCCCSSSCCCCCTTC-EEETTEEECTTT----TBCTTTCCBCTTSCEEECSSCEE
T ss_pred cCCCcccCCEeCcce-EEECccccccCc----CEECCCCCCCCCCccEeECCEEE
Confidence 357999999986432 221222333333 35667777776555444444454
No 349
>2co8_A NEDD9 interacting protein with calponin homology and LIM domains; zinc finger protein, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.39.1.3 g.39.1.3
Probab=34.03 E-value=21 Score=27.42 Aligned_cols=48 Identities=17% Similarity=0.293 Sum_probs=26.9
Q ss_pred cccccCCCccccccccccc---cccccchhhhhCCCCcccchHhHhhheeee--cCCcEE
Q 011117 69 VHFCVRCDYPIAIYGRLNP---CEHVFCLDCARSDSMCYLCDERIQKIQTIK--LMEGIF 123 (493)
Q Consensus 69 vhFCdICdlPI~iygRmIP---CKHVFCydCA~sDktCP~Cna~VqrIEri~--p~esIF 123 (493)
...|..|+++|...-++.- ..|.-|+ +|-.|+..+....... .++.||
T Consensus 15 ~~~C~~C~~~I~~~e~v~a~~~~wH~~CF-------~C~~C~~~L~~~~~~~~~~~g~~y 67 (82)
T 2co8_A 15 GDLCALCGEHLYVLERLCVNGHFFHRSCF-------RCHTCEATLWPGGYEQHPGDGHFY 67 (82)
T ss_dssp SCBCSSSCCBCCTTTBCCBTTBCCBTTTC-------BCSSSCCBCCTTSEECCTTTCCCE
T ss_pred CCCCcccCCCcccceEEEECCCeeCCCcC-------EEcCCCCCcCCCceeEeCcCCEEE
Confidence 4679999999954322322 2344444 4556776666555441 344554
No 350
>1wep_A PHF8; structural genomics, PHD domain, riken structural genomics/proteomics initiative, RSGI, DNA binding protein; NMR {Mus musculus} SCOP: g.50.1.2
Probab=33.98 E-value=12 Score=29.42 Aligned_cols=22 Identities=18% Similarity=0.443 Sum_probs=16.3
Q ss_pred cccccccCCCccccccccccccc
Q 011117 67 ERVHFCVRCDYPIAIYGRLNPCE 89 (493)
Q Consensus 67 EKvhFCdICdlPI~iygRmIPCK 89 (493)
+...+| +|+.+......||-|-
T Consensus 10 ~~~~~C-~C~~~~d~~~~MIqCd 31 (79)
T 1wep_A 10 LVPVYC-LCRQPYNVNHFMIECG 31 (79)
T ss_dssp CCCCCS-TTSCSCCSSSCEEEBT
T ss_pred CCccEE-EcCCccCCCCceEEcC
Confidence 346778 9999887677788765
No 351
>2dlo_A Thyroid receptor-interacting protein 6; LIM domain, OPA-interacting protein 1, zyxin related protein 1 (ZRP-1), structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.39.1.3 g.39.1.3
Probab=33.64 E-value=10 Score=28.67 Aligned_cols=13 Identities=31% Similarity=0.697 Sum_probs=7.5
Q ss_pred cccccCCCccccc
Q 011117 69 VHFCVRCDYPIAI 81 (493)
Q Consensus 69 vhFCdICdlPI~i 81 (493)
...|..|+++|..
T Consensus 15 ~~~C~~C~~~I~~ 27 (81)
T 2dlo_A 15 LEKCATCSQPILD 27 (81)
T ss_dssp CCBCTTTCCBCCS
T ss_pred CCccccCCCeecc
Confidence 3456666666653
No 352
>2kfq_A FP1; protein, de novo protein; NMR {Synthetic}
Probab=33.40 E-value=2.3 Score=26.15 Aligned_cols=22 Identities=32% Similarity=0.824 Sum_probs=17.4
Q ss_pred EEecCCchhhhhcChhHHHHhhhh
Q 011117 123 FICAAPHCLKSFLKKTEFEAHIHV 146 (493)
Q Consensus 123 FIC~~~gCkRtYLSqRDLQAHInh 146 (493)
|.|. .|.|.|....+|..|++.
T Consensus 3 ~~C~--~C~k~f~~~~~L~~H~~~ 24 (32)
T 2kfq_A 3 FACP--ACPKRFMRSDALSKHIKT 24 (32)
T ss_dssp SSSS--SSCTTHHHHHTTSSSTTS
T ss_pred CCCC--CCCcccCCHHHHHHHHHH
Confidence 4454 599999999999999753
No 353
>1vyx_A ORF K3, K3RING; zinc-binding protein, ring domain, cross-brace motif; NMR {Human herpesvirus 8} SCOP: g.44.1.3
Probab=33.05 E-value=17 Score=27.30 Aligned_cols=42 Identities=19% Similarity=0.485 Sum_probs=28.2
Q ss_pred ccccccCCCcccccccccccccc-----ccchhhhh------CCCCcccchHhH
Q 011117 68 RVHFCVRCDYPIAIYGRLNPCEH-----VFCLDCAR------SDSMCYLCDERI 110 (493)
Q Consensus 68 KvhFCdICdlPI~iygRmIPCKH-----VFCydCA~------sDktCP~Cna~V 110 (493)
....|-||....... .+.||+. .|=.+|+. .+.+|++|+...
T Consensus 5 ~~~~CrIC~~~~~~~-l~~PC~C~gs~~~~H~~Cl~~W~~~~~~~~C~~C~~~~ 57 (60)
T 1vyx_A 5 DVPVCWICNEELGNE-RFRACGCTGELENVHRSCLSTWLTISRNTACQICGVVY 57 (60)
T ss_dssp SCCEETTTTEECSCC-CCCSCCCSSGGGSCCHHHHHHHHHHHTCSBCTTTCCBC
T ss_pred CCCEeEEeecCCCCc-eecCcCCCCchhhhHHHHHHHHHHhCCCCccCCCCCee
Confidence 356899997543333 3678653 66566776 357899998764
No 354
>2k16_A Transcription initiation factor TFIID subunit 3; protein, alternative splicing, metal-binding, nucleus, phosphoprotein, transcription regulation; NMR {Mus musculus} PDB: 2k17_A*
Probab=32.78 E-value=26 Score=26.83 Aligned_cols=47 Identities=21% Similarity=0.560 Sum_probs=26.7
Q ss_pred CcccccccCCCccccccccccccc---cccchhhhh--------CCCCcccchHhHhhh
Q 011117 66 GERVHFCVRCDYPIAIYGRLNPCE---HVFCLDCAR--------SDSMCYLCDERIQKI 113 (493)
Q Consensus 66 gEKvhFCdICdlPI~iygRmIPCK---HVFCydCA~--------sDktCP~Cna~VqrI 113 (493)
++....|.+|+.+-. -..||-|- ..|=..|+. .+..|+.|..++.+-
T Consensus 15 ~~~~~~C~~C~~~~~-~~~mi~CD~C~~wfH~~Cv~~~~~~~~~~~w~C~~C~~~~~k~ 72 (75)
T 2k16_A 15 GNQIWICPGCNKPDD-GSPMIGCDDCDDWYHWPCVGIMAAPPEEMQWFCPKCANKIKKD 72 (75)
T ss_dssp SCEEECBTTTTBCCS-SCCEEECSSSSSEEEHHHHTCSSCCCSSSCCCCTTTHHHHCSC
T ss_pred CCCCcCCCCCCCCCC-CCCEEEcCCCCcccccccCCCCccCCCCCCEEChhccCchhhc
Confidence 344667888877642 12455553 222244544 246799998877543
No 355
>2lbm_A Transcriptional regulator ATRX; metal binding protein-structural protein compl; HET: M3L; NMR {Homo sapiens} PDB: 2ld1_A
Probab=32.47 E-value=18 Score=32.32 Aligned_cols=55 Identities=22% Similarity=0.556 Sum_probs=37.3
Q ss_pred ccccccCCCccccc----cccccccccc-cchhhhh-------------CCCCcccchHhHhhheeeecCCcEEEecCCc
Q 011117 68 RVHFCVRCDYPIAI----YGRLNPCEHV-FCLDCAR-------------SDSMCYLCDERIQKIQTIKLMEGIFICAAPH 129 (493)
Q Consensus 68 KvhFCdICdlPI~i----ygRmIPCKHV-FCydCA~-------------sDktCP~Cna~VqrIEri~p~esIFIC~~~g 129 (493)
+.++|..|+..|.. ..+.-|=.++ .|-.|.. .+..|-.|. ..++|+.|. .
T Consensus 13 ~~i~Ct~Cg~~~~~~q~~~~~~HPll~v~~C~~C~~~y~~~~~~~d~Dg~~d~C~vC~----------~GG~LlcCD--~ 80 (142)
T 2lbm_A 13 GIVSCTACGQQVNHFQKDSIYRHPSLQVLICKNCFKYYMSDDISRDSDGMDEQCRWCA----------EGGNLICCD--F 80 (142)
T ss_dssp CCCBCTTTCSBSTTTCSSSEEEETTTTEEEEHHHHHHHHHSCCCBCTTSCBCSCSSSC----------CCSSEEECS--S
T ss_pred CCCEecCCCCccccccccchhcCCCccccccHHHHHHHhcCCceecCCCCCCeecccC----------CCCcEEeCC--C
Confidence 46789999998842 3445555555 7888876 225677775 357888886 5
Q ss_pred hhhhh
Q 011117 130 CLKSF 134 (493)
Q Consensus 130 CkRtY 134 (493)
|-|.|
T Consensus 81 Cpr~F 85 (142)
T 2lbm_A 81 CHNAF 85 (142)
T ss_dssp SCCEE
T ss_pred CCCee
Confidence 66666
No 356
>1x61_A Thyroid receptor interacting protein 6; LIM domain, OPA-interacting protein 1, zyxin related protein 1 (ZRP-1), structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.39.1.3 g.39.1.3
Probab=31.60 E-value=23 Score=25.93 Aligned_cols=51 Identities=16% Similarity=0.375 Sum_probs=27.1
Q ss_pred cccccCCCccccccc-cccccccccchhhhhCCCCcccchHhHhhheeeecCCcEE
Q 011117 69 VHFCVRCDYPIAIYG-RLNPCEHVFCLDCARSDSMCYLCDERIQKIQTIKLMEGIF 123 (493)
Q Consensus 69 vhFCdICdlPI~iyg-RmIPCKHVFCydCA~sDktCP~Cna~VqrIEri~p~esIF 123 (493)
...|..|+++|.... .+.-=...|-.+| .+|..|+..+........++.+|
T Consensus 5 ~~~C~~C~~~I~~~~~~~~a~~~~~H~~C----F~C~~C~~~L~~~~~~~~~~~~y 56 (72)
T 1x61_A 5 SSGCGGCGEDVVGDGAGVVALDRVFHVGC----FVCSTCRAQLRGQHFYAVERRAY 56 (72)
T ss_dssp CCCCSSSCSCCCSSSCCEECSSSEECTTT----CBCSSSCCBCTTSCEEESSSCEE
T ss_pred CCCCccCCCccCCCceEEEECCCeEcccC----CcccccCCcCCcCcCEeeCCeEE
Confidence 467999999997421 1111123333333 24566777775544444444444
No 357
>2kpi_A Uncharacterized protein SCO3027; zinc finger, PSI-2, NESG, all beta, structural genomics, protein structure initiative; NMR {Streptomyces coelicolor}
Probab=31.42 E-value=7.8 Score=29.59 Aligned_cols=29 Identities=17% Similarity=0.548 Sum_probs=19.2
Q ss_pred CCcccchHhHhhheeeecCCcEEEecCCchhhhhc
Q 011117 101 SMCYLCDERIQKIQTIKLMEGIFICAAPHCLKSFL 135 (493)
Q Consensus 101 ktCP~Cna~VqrIEri~p~esIFIC~~~gCkRtYL 135 (493)
-.||.|...... .++..+|..+.|++.|-
T Consensus 11 L~CP~c~~~L~~------~~~~L~C~~~~c~~~YP 39 (56)
T 2kpi_A 11 LACPACHAPLEE------RDAELICTGQDCGLAYP 39 (56)
T ss_dssp CCCSSSCSCEEE------ETTEEEECSSSCCCEEE
T ss_pred eeCCCCCCccee------cCCEEEcCCcCCCcEEe
Confidence 368888885422 23667788778877773
No 358
>4cpa_I Metallocarboxypeptidase inhibitor; hydrolase (C-terminal peptidase); 2.50A {Solanum tuberosum} SCOP: g.3.2.1 PDB: 1h20_A
Probab=31.41 E-value=14 Score=27.10 Aligned_cols=29 Identities=24% Similarity=0.487 Sum_probs=21.3
Q ss_pred cCCCccccccccccccccccchhhhhCCCCc
Q 011117 73 VRCDYPIAIYGRLNPCEHVFCLDCARSDSMC 103 (493)
Q Consensus 73 dICdlPI~iygRmIPCKHVFCydCA~sDktC 103 (493)
++|++|.++.--. =.-.||..|++..++|
T Consensus 6 ~~C~KPC~T~DDC--S~gw~CqaC~nfa~TC 34 (38)
T 4cpa_I 6 PICNKPCKTHDDC--SGAWFCQACWNSARTC 34 (38)
T ss_dssp TTTTCBCSSSSSS--CCCSSCCEEETTTTEE
T ss_pred cccCCCccCcccc--ccchHHHHHHhhcccc
Confidence 5788888774432 2456999999988877
No 359
>2d9k_A FLN29 gene product; zinc finger, ZF-TRAF, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=30.98 E-value=3.4 Score=31.29 Aligned_cols=27 Identities=19% Similarity=0.421 Sum_probs=19.0
Q ss_pred CcEEEecCCchhhhhcChhHHHHhhhhhhc
Q 011117 120 EGIFICAAPHCLKSFLKKTEFEAHIHVSHA 149 (493)
Q Consensus 120 esIFIC~~~gCkRtYLSqRDLQAHInhrH~ 149 (493)
+..|.|.. |.+.|. .++|+.|+.....
T Consensus 41 ~~~~~C~~--C~~~~~-~~~l~~H~~~c~~ 67 (75)
T 2d9k_A 41 ARTELCGN--CGRNVL-VKDLKTHPEVCGR 67 (75)
T ss_dssp HCEEECSS--SCCEEE-TTGGGTHHHHBTT
T ss_pred CCceEccc--CCCcCc-HHHHHHHHHHccC
Confidence 45677765 888766 5899999865433
No 360
>1tot_A CREB-binding protein; zinc binding, CBP, TAZ2, transferase; NMR {Mus musculus} SCOP: g.44.1.6
Probab=30.78 E-value=17 Score=27.16 Aligned_cols=31 Identities=23% Similarity=0.601 Sum_probs=23.6
Q ss_pred cccccCCCccccccccccccccc-cchhhhhC
Q 011117 69 VHFCVRCDYPIAIYGRLNPCEHV-FCLDCARS 99 (493)
Q Consensus 69 vhFCdICdlPI~iygRmIPCKHV-FCydCA~s 99 (493)
...|+.|...|.++++-.-|.-. +|..|+..
T Consensus 6 ~~~Cd~C~~~ig~R~~C~~C~dyDLC~~C~~~ 37 (52)
T 1tot_A 6 VYTCNECKHHVETRWHCTVCEDYDLCINCYNT 37 (52)
T ss_dssp CEEETTTTEEESSEEEESSSSSCEECHHHHHH
T ss_pred EEECCCCCCCCcceEEcCCCCCchhHHHHHhC
Confidence 46799999888777777777665 78888763
No 361
>1v6g_A Actin binding LIM protein 2; LIM domain, zinc binding domain, ablim2, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Homo sapiens} SCOP: g.39.1.3 g.39.1.3
Probab=29.75 E-value=15 Score=27.85 Aligned_cols=10 Identities=40% Similarity=0.763 Sum_probs=5.3
Q ss_pred cccCCCcccc
Q 011117 71 FCVRCDYPIA 80 (493)
Q Consensus 71 FCdICdlPI~ 80 (493)
.|..|+++|.
T Consensus 17 ~C~~C~~~I~ 26 (81)
T 1v6g_A 17 RCFSCDQFIE 26 (81)
T ss_dssp BCTTTCCBCC
T ss_pred cCccccCEec
Confidence 4555555554
No 362
>3v43_A Histone acetyltransferase KAT6A; MOZ, PHD finger, transferase-structural protein; 1.47A {Homo sapiens} PDB: 2ln0_A
Probab=29.44 E-value=11 Score=31.32 Aligned_cols=17 Identities=18% Similarity=0.323 Sum_probs=12.1
Q ss_pred hhcCcccccccCCCccc
Q 011117 63 RQLGERVHFCVRCDYPI 79 (493)
Q Consensus 63 rqlgEKvhFCdICdlPI 79 (493)
+..+|+.++|+.|...+
T Consensus 20 ~g~~~~Ll~C~~C~~~~ 36 (112)
T 3v43_A 20 EKKPEELISCADCGNSG 36 (112)
T ss_dssp TSCCCCCEECTTTCCEE
T ss_pred CCCchhceEhhhcCCCC
Confidence 34556788899988754
No 363
>2elu_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} PDB: 2elw_A
Probab=28.52 E-value=20 Score=26.03 Aligned_cols=22 Identities=23% Similarity=0.427 Sum_probs=20.0
Q ss_pred chhhhhcChhHHHHhhhhhhcc
Q 011117 129 HCLKSFLKKTEFEAHIHVSHAD 150 (493)
Q Consensus 129 gCkRtYLSqRDLQAHInhrH~~ 150 (493)
.|+|-|..-+.|-.||++.|.-
T Consensus 14 fckkkysdvknlikhire~hd~ 35 (37)
T 2elu_A 14 FCKKKYSDVKNLIKHIRDAHDP 35 (37)
T ss_dssp TTTEECSSHHHHHHHHHHTTCC
T ss_pred HHHHHHHHHHHHHHHHHHhcCC
Confidence 5999999999999999999964
No 364
>2jne_A Hypothetical protein YFGJ; zinc fingers, two zinc, structural genomics, PSI-2, protein structure initiative; NMR {Escherichia coli} SCOP: g.41.18.1
Probab=28.44 E-value=6.1 Score=34.22 Aligned_cols=36 Identities=28% Similarity=0.494 Sum_probs=27.7
Q ss_pred cccccCCCccccccccccccccccchhhhh----------CCCCcccchHhHhh
Q 011117 69 VHFCVRCDYPIAIYGRLNPCEHVFCLDCAR----------SDSMCYLCDERIQK 112 (493)
Q Consensus 69 vhFCdICdlPI~iygRmIPCKHVFCydCA~----------sDktCP~Cna~Vqr 112 (493)
.+.|+.|+..|. +.+||-+|-. .|+.|-.|++.|.+
T Consensus 48 ~~hC~~C~~~f~--------~~a~CPdC~q~LevLkACGAvdYFC~~chgLiSK 93 (101)
T 2jne_A 48 HARCRSCGEFIE--------MKALCPDCHQPLQVLKACGAVDYFCQHGHGLISK 93 (101)
T ss_dssp EEEETTTCCEEE--------EEEECTTTCSBCEEEEETTEEEEEETTTTEEECT
T ss_pred EEECccccchhh--------ccccCcchhhHHHHHHHhcCcchhhccCCceeec
Confidence 345999998665 4789999987 46788899888754
No 365
>1a7i_A QCRP2 (LIM1); LIM domain containing proteins, metal-binding protein, zinc finger; NMR {Coturnix japonica} SCOP: g.39.1.3 g.39.1.3 PDB: 2o10_A
Probab=28.34 E-value=12 Score=28.26 Aligned_cols=12 Identities=17% Similarity=0.362 Sum_probs=8.0
Q ss_pred cccccCCCcccc
Q 011117 69 VHFCVRCDYPIA 80 (493)
Q Consensus 69 vhFCdICdlPI~ 80 (493)
...|..|+++|.
T Consensus 7 ~~~C~~C~~~I~ 18 (81)
T 1a7i_A 7 GNKCGACGRTVY 18 (81)
T ss_dssp -CBCSSSCCBCS
T ss_pred CCcCcCcCcccc
Confidence 356778887774
No 366
>1zfo_A LAsp-1; LIM domain, zinc-finger, metal-binding protein; NMR {Sus scrofa} SCOP: g.39.1.4
Probab=28.21 E-value=10 Score=25.42 Aligned_cols=23 Identities=9% Similarity=0.423 Sum_probs=18.7
Q ss_pred CCcccchHhHhhheeeecCCcEE
Q 011117 101 SMCYLCDERIQKIQTIKLMEGIF 123 (493)
Q Consensus 101 ktCP~Cna~VqrIEri~p~esIF 123 (493)
.+|++|...|-..|++...+.+|
T Consensus 4 ~~C~~C~k~Vy~~Ek~~~~g~~~ 26 (31)
T 1zfo_A 4 PNCARCGKIVYPTEKVNCLDKFW 26 (31)
T ss_dssp CBCSSSCSBCCGGGCCCSSSSCC
T ss_pred CcCCccCCEEecceeEEECCeEe
Confidence 57999999998888887666555
No 367
>2d8y_A Eplin protein; LIM domain, epithelial protein LOST in neoplasm, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.39.1.3 g.39.1.3
Probab=27.99 E-value=14 Score=28.80 Aligned_cols=51 Identities=24% Similarity=0.500 Sum_probs=24.3
Q ss_pred cccccCCCccccccccccccccccchhhhhCCCCcccchHhHhhheeeecCCcEE
Q 011117 69 VHFCVRCDYPIAIYGRLNPCEHVFCLDCARSDSMCYLCDERIQKIQTIKLMEGIF 123 (493)
Q Consensus 69 vhFCdICdlPI~iygRmIPCKHVFCydCA~sDktCP~Cna~VqrIEri~p~esIF 123 (493)
...|..|+++|....++.--..+|-.+| .+|-.|+..+........++.||
T Consensus 15 ~~~C~~C~~~I~~~~~v~a~~~~~H~~C----F~C~~C~~~L~~~~~~~~~g~~y 65 (91)
T 2d8y_A 15 RETCVECQKTVYPMERLLANQQVFHISC----FRCSYCNNKLSLGTYASLHGRIY 65 (91)
T ss_dssp SCBCTTTCCBCCTTSEEECSSSEEETTT----CBCTTTCCBCCTTTCCCSSSCCC
T ss_pred CCcCccCCCccCCceeEEECCCEECCCC----CeeCCCCCCCCCCCcEeECCEEE
Confidence 4678888888864222322233333333 23455655554433333333344
No 368
>2dj7_A Actin-binding LIM protein 3; LIM domain, Zn binding protein, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.39.1.3 g.39.1.3
Probab=27.41 E-value=21 Score=27.51 Aligned_cols=48 Identities=25% Similarity=0.463 Sum_probs=25.3
Q ss_pred cccccCCCccccccccccc---cccccchhhhhCCCCcccchHhHhhheeeecCCcEEEe
Q 011117 69 VHFCVRCDYPIAIYGRLNP---CEHVFCLDCARSDSMCYLCDERIQKIQTIKLMEGIFIC 125 (493)
Q Consensus 69 vhFCdICdlPI~iygRmIP---CKHVFCydCA~sDktCP~Cna~VqrIEri~p~esIFIC 125 (493)
...|..|+++|...-.+.- ..|.-|. +|..|+..+.. +... .++...|
T Consensus 15 ~~~C~~C~~~I~~~~~v~a~~~~wH~~CF-------~C~~C~~~L~~-~~~~-~~g~~yC 65 (80)
T 2dj7_A 15 PSHCAGCKEEIKHGQSLLALDKQWHVSCF-------KCQTCSVILTG-EYIS-KDGVPYC 65 (80)
T ss_dssp CSCCTTTCCCCSSSCCEEETTEEECTTTC-------BCSSSCCBCSS-CCEE-ETTEEEC
T ss_pred CCCCcCcCCeeCCCeEEEECCcccccccC-------CcCcCCCCcCC-CeEE-ECCEEEC
Confidence 5689999999963222221 2344343 45567666653 3333 3444454
No 369
>1wyh_A SLIM 2, skeletal muscle LIM-protein 2; structural genomics, riken structural genomics/proteomics initiative, RSGI, NPPSFA; NMR {Homo sapiens} SCOP: g.39.1.3 g.39.1.3
Probab=27.17 E-value=35 Score=24.88 Aligned_cols=51 Identities=14% Similarity=0.279 Sum_probs=26.6
Q ss_pred cccccCCCcccccccc-ccccccccchhhhhCCCCcccchHhHhhheeeecCCcEE
Q 011117 69 VHFCVRCDYPIAIYGR-LNPCEHVFCLDCARSDSMCYLCDERIQKIQTIKLMEGIF 123 (493)
Q Consensus 69 vhFCdICdlPI~iygR-mIPCKHVFCydCA~sDktCP~Cna~VqrIEri~p~esIF 123 (493)
...|..|+++|..-.. +.--..+|=.+| .+|..|+..+........++.+|
T Consensus 5 ~~~C~~C~~~I~~~~~~~~a~~~~~H~~C----F~C~~C~~~L~~~~~~~~~~~~y 56 (72)
T 1wyh_A 5 SSGCSACGETVMPGSRKLEYGGQTWHEHC----FLCSGCEQPLGSRSFVPDKGAHY 56 (72)
T ss_dssp CCBCSSSCCBCCSSSCEECSTTCCEETTT----CBCTTTCCBTTTSCEEEETTEEE
T ss_pred CCCCccCCCccccCccEEEECccccCccc----CeECCCCCcCCCCccCCcCCeEE
Confidence 4679999999984211 211222232233 24556776666544444344454
No 370
>2l4z_A DNA endonuclease RBBP8, LIM domain transcription LMO4; protein-protein interaction, LIM-interaction DOM LMO4, RBBP8/CTIP, LIM-only protein; HET: DNA; NMR {Homo sapiens}
Probab=27.06 E-value=17 Score=30.40 Aligned_cols=39 Identities=21% Similarity=0.346 Sum_probs=24.1
Q ss_pred cccccCCCccccccccccccccccchhhhhCCCCcccchHhHh
Q 011117 69 VHFCVRCDYPIAIYGRLNPCEHVFCLDCARSDSMCYLCDERIQ 111 (493)
Q Consensus 69 vhFCdICdlPI~iygRmIPCKHVFCydCA~sDktCP~Cna~Vq 111 (493)
...|..|+++|....++.--...|=.+| .+|..|+..+.
T Consensus 61 ~~~C~~C~~~I~~~~~v~a~~~~wH~~C----F~C~~C~~~L~ 99 (123)
T 2l4z_A 61 WKRCAGCGGKIADRFLLYAMDSYWHSRC----LKCSSCQAQLG 99 (123)
T ss_dssp CSBBSSSSSBCCSSSEEEETTEEEETTT----SBCTTTCCBGG
T ss_pred CCcCcCCCCCcCCcEEEEeCCcEEcccc----cCcCcCCCccc
Confidence 5789999999987543333233332333 35667887775
No 371
>1x6a_A LIMK-2, LIM domain kinase 2; LIM-kinase 2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.39.1.3 g.39.1.3
Probab=26.74 E-value=11 Score=28.41 Aligned_cols=39 Identities=21% Similarity=0.416 Sum_probs=20.4
Q ss_pred cccccCCCccccccccccccccccchhhhhCCCCcccchHhHhh
Q 011117 69 VHFCVRCDYPIAIYGRLNPCEHVFCLDCARSDSMCYLCDERIQK 112 (493)
Q Consensus 69 vhFCdICdlPI~iygRmIPCKHVFCydCA~sDktCP~Cna~Vqr 112 (493)
...|..|+++|.... +.--...|-.+| .+|..|+..+..
T Consensus 15 ~~~C~~C~~~I~~~~-~~a~~~~~H~~C----F~C~~C~~~L~~ 53 (81)
T 1x6a_A 15 GEFCHGCSLLMTGPF-MVAGEFKYHPEC----FACMSCKVIIED 53 (81)
T ss_dssp SCBCTTTCCBCCSCC-BCCTTCCBCTTS----CBCTTTCCBCCT
T ss_pred CCcCccCCCCcCceE-EEECCceecccc----CCccCCCCccCC
Confidence 346888888887432 211222333333 346667766643
No 372
>3kv5_D JMJC domain-containing histone demethylation protein 1D; epigenetics, histone CODE, jumonji lysine demethylase, metal-binding, zinc, zinc-finger; HET: OGA; 2.39A {Homo sapiens} PDB: 3kv6_A*
Probab=26.70 E-value=11 Score=38.92 Aligned_cols=42 Identities=19% Similarity=0.385 Sum_probs=26.9
Q ss_pred ccccccCCCcccccccccccccc---ccchhhhh---------CCCCcccchHhH
Q 011117 68 RVHFCVRCDYPIAIYGRLNPCEH---VFCLDCAR---------SDSMCYLCDERI 110 (493)
Q Consensus 68 KvhFCdICdlPI~iygRmIPCKH---VFCydCA~---------sDktCP~Cna~V 110 (493)
....| +|+.+....+.||-|.. -|=..|.. ....|+.|...-
T Consensus 36 ~~~yC-~C~~~~d~~~~MIqCd~C~~WfH~~Cvgl~~~~~~~~~~~~C~~C~~~~ 89 (488)
T 3kv5_D 36 PPVYC-VCRQPYDVNRFMIECDICKDWFHGSCVGVEEHHAVDIDLYHCPNCAVLH 89 (488)
T ss_dssp CCEET-TTTEECCTTSCEEEBTTTCCEEEHHHHTCCGGGGGGEEEBCCHHHHHHH
T ss_pred CCeEE-eCCCcCCCCCCeEEccCCCCceeeeecCcCcccccCCCEEECCCCcCCc
Confidence 35778 99998876778887653 23344553 125788887653
No 373
>2dip_A Zinc finger SWIM domain-containing protein 2; ZZ domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.44.1.6
Probab=26.70 E-value=29 Score=29.02 Aligned_cols=33 Identities=21% Similarity=0.460 Sum_probs=18.6
Q ss_pred CcccccccCCCc-ccc-ccccccccccc-cchhhhh
Q 011117 66 GERVHFCVRCDY-PIA-IYGRLNPCEHV-FCLDCAR 98 (493)
Q Consensus 66 gEKvhFCdICdl-PI~-iygRmIPCKHV-FCydCA~ 98 (493)
......|+.|+. ||. ++++-.=|.-. +|..|+.
T Consensus 28 ~H~gv~Cd~C~~~pI~G~RykC~~C~d~DLC~~C~~ 63 (98)
T 2dip_A 28 KHLGIPCNNCKQFPIEGKCYKCTECIEYHLCQECFD 63 (98)
T ss_dssp SCCCCCCSSSCCSSCCSCEEEESSSSSCEEEHHHHH
T ss_pred ccCCCCCcCCCCCCcccCeEECCCCCCccHHHHHHc
Confidence 344577888884 554 45555445333 5555554
No 374
>1zr9_A Zinc finger protein 593; DNA binding, structural genomics, PSI, protein structure initiative, center for eukaryotic structural genomics, CESG; NMR {Homo sapiens} SCOP: g.37.1.4
Probab=26.50 E-value=14 Score=32.48 Aligned_cols=34 Identities=24% Similarity=0.460 Sum_probs=25.9
Q ss_pred eecCCcEEEecCCchhhhhcChhHHHHhhhh-hhccc
Q 011117 116 IKLMEGIFICAAPHCLKSFLKKTEFEAHIHV-SHADL 151 (493)
Q Consensus 116 i~p~esIFIC~~~gCkRtYLSqRDLQAHInh-rH~~l 151 (493)
-+..+.-|.|.. |.|.|.+...|+.|.+. .|+..
T Consensus 44 d~tGekpfyC~~--C~K~F~~~~~L~~H~rsK~HKrr 78 (124)
T 1zr9_A 44 DLPGGGLHRCLA--CARYFIDSTNLKTHFRSKDHKKR 78 (124)
T ss_dssp SSGGGGCSEETT--TTEECSSHHHHHHHTTCHHHHHH
T ss_pred cCCCCcceEccc--CcchhCCHHHHHHHHhhhhhhHH
Confidence 344567899975 99999999999999843 35443
No 375
>4ask_A Lysine-specific demethylase 6B; oxidoreductase, KDM6B, GSK-J1, inhibitor, lysine specific HI demethylase; HET: K0I; 1.86A {Homo sapiens} PDB: 2xue_A* 4eyu_A* 4ez4_A* 4ezh_A*
Probab=26.39 E-value=17 Score=38.46 Aligned_cols=18 Identities=22% Similarity=0.069 Sum_probs=14.8
Q ss_pred CcceEEeecCCeEEEecC
Q 011117 22 PVETVTVACPDHLVLADL 39 (493)
Q Consensus 22 ~pesVtVnc~Dh~VIA~~ 39 (493)
.|.-.+++.++++||+-+
T Consensus 310 IPvyr~iQkPGdfVit~P 327 (510)
T 4ask_A 310 IPVYRFVQRPGDLVWINA 327 (510)
T ss_dssp CCCEEEEECTTCEEEECT
T ss_pred CCeEEEEECCCCEEEECC
Confidence 567788889999998876
No 376
>2pv0_B DNA (cytosine-5)-methyltransferase 3-like; DNMT3L, unmethylated H3K4, de novo DNA methylation, transferase regulator; HET: DNA; 3.30A {Homo sapiens} PDB: 2pvc_B*
Probab=26.20 E-value=29 Score=35.50 Aligned_cols=29 Identities=17% Similarity=0.609 Sum_probs=16.2
Q ss_pred ccccCCCccccccc-cccccccccchhhhh
Q 011117 70 HFCVRCDYPIAIYG-RLNPCEHVFCLDCAR 98 (493)
Q Consensus 70 hFCdICdlPI~iyg-RmIPCKHVFCydCA~ 98 (493)
..|-+|..--..+. ..--|..+||.+|+.
T Consensus 94 ~yCr~C~~Gg~l~~Cdn~~C~r~FC~~Ci~ 123 (386)
T 2pv0_B 94 SYCSICCSGETLLICGNPDCTRCYCFECVD 123 (386)
T ss_dssp CSCTTTCCCSSCEECCSTTCCCEECHHHHH
T ss_pred ccceEcCCCCeEEEeCCCCCCcchHHHHHH
Confidence 45666663221111 111467889999997
No 377
>2vrw_B P95VAV, VAV1, proto-oncogene VAV; lipoprotein, GTP-binding, metal-binding, phosphoprotein, exchange factor, RAC, GTPase, membrane domain; 1.85A {Mus musculus} PDB: 3bji_A 1f5x_A
Probab=25.59 E-value=35 Score=32.87 Aligned_cols=36 Identities=17% Similarity=0.253 Sum_probs=24.7
Q ss_pred cccccCCCcccc----ccccccccccccchhhhhCCCCcc
Q 011117 69 VHFCVRCDYPIA----IYGRLNPCEHVFCLDCARSDSMCY 104 (493)
Q Consensus 69 vhFCdICdlPI~----iygRmIPCKHVFCydCA~sDktCP 104 (493)
..+|..|...|. -..+.--|+.++|..|...-..|.
T Consensus 357 ~t~C~~C~~~~~g~~~qg~~C~~C~~~~h~~C~~~~~~C~ 396 (406)
T 2vrw_B 357 TTSCKACQMLLRGTFYQGYRCYRCRAPAHKECLGRVPPCG 396 (406)
T ss_dssp CCBCTTTCCBCCSSSSCEEEETTTCCEECGGGGGGSCCC-
T ss_pred CCCCccccchhceeCCCCCCCCCCcCccchhhhhhCCCCC
Confidence 589999998874 223344489999999988433353
No 378
>2ozu_A Histone acetyltransferase MYST3; structural genomics, structural G consortium, SGC; HET: ALY ACO; 2.30A {Homo sapiens} SCOP: d.108.1.1 PDB: 2rc4_A* 1m36_A
Probab=25.31 E-value=22 Score=35.26 Aligned_cols=29 Identities=21% Similarity=0.555 Sum_probs=24.4
Q ss_pred CCcEEEecCCchhhhhcChhHHHHhhhhhhc
Q 011117 119 MEGIFICAAPHCLKSFLKKTEFEAHIHVSHA 149 (493)
Q Consensus 119 ~esIFIC~~~gCkRtYLSqRDLQAHInhrH~ 149 (493)
.+.||||. .|+|.|.++..|..|...+-.
T Consensus 38 ~~~lyiCe--~Clky~~~~~~~~~H~~~C~~ 66 (284)
T 2ozu_A 38 LPKLYLCE--FCLKYMKSRTILQQHMKKCGW 66 (284)
T ss_dssp CSEEEECT--TTCCEESSHHHHHHHHHHCCC
T ss_pred CCcEEEch--hhHhHhCCHHHHHHHhccCCC
Confidence 56899985 799999999999999865543
No 379
>1wig_A KIAA1808 protein; LIM domain, zinc finger, metal-binding protein, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Homo sapiens} SCOP: g.39.1.3 g.39.1.3
Probab=25.24 E-value=34 Score=25.69 Aligned_cols=50 Identities=16% Similarity=0.274 Sum_probs=25.7
Q ss_pred cccccCCCccccccccccccccccchhhhhCCCCcccchHhHh-hheeeecCCcEE
Q 011117 69 VHFCVRCDYPIAIYGRLNPCEHVFCLDCARSDSMCYLCDERIQ-KIQTIKLMEGIF 123 (493)
Q Consensus 69 vhFCdICdlPI~iygRmIPCKHVFCydCA~sDktCP~Cna~Vq-rIEri~p~esIF 123 (493)
...|..|+++|...+. .--...|=.+| .+|..|+..+. .......++.||
T Consensus 5 ~~~C~~C~~~I~~~~v-~a~~~~wH~~C----F~C~~C~~~L~~~~~f~~~~~~~y 55 (73)
T 1wig_A 5 SSGCDSCEKYITGRVL-EAGEKHYHPSC----ALCVRCGQMFAEGEEMYLQGSSIW 55 (73)
T ss_dssp CCSCSSSCCCCSSCCB-CCSSCCBCTTT----SCCSSSCCCCCSSCCCEEETTEEE
T ss_pred cCCcccCCCEecCeeE-EeCCCCCCCCc----CEeCCCCCCCCCCCeeEeeCCEEE
Confidence 3579999999876321 11222222222 35666777665 333333334444
No 380
>1iml_A CRIP, cysteine rich intestinal protein; metal-binding protein, LIM domain protein; NMR {Rattus rattus} SCOP: g.39.1.3 g.39.1.3
Probab=25.17 E-value=23 Score=26.39 Aligned_cols=10 Identities=20% Similarity=0.733 Sum_probs=4.4
Q ss_pred cccCCCcccc
Q 011117 71 FCVRCDYPIA 80 (493)
Q Consensus 71 FCdICdlPI~ 80 (493)
.|..|+.+|.
T Consensus 29 ~C~~C~~~L~ 38 (76)
T 1iml_A 29 KCEKCGKTLT 38 (76)
T ss_dssp BCTTTCCBCC
T ss_pred CccccCccCC
Confidence 3444444443
No 381
>3a1b_A DNA (cytosine-5)-methyltransferase 3A, histone H3; zinc-finger, histone binding, chromosomal protein, DNA damag repair, DNA-binding, methylation; HET: DNA; 2.29A {Homo sapiens} PDB: 3a1a_A*
Probab=25.06 E-value=21 Score=32.65 Aligned_cols=56 Identities=20% Similarity=0.529 Sum_probs=33.5
Q ss_pred ccccccCCCcccccccccccccc-ccchhhhh-------------CCCCcccchHhHhhheeeecCCcEEEecCCchhhh
Q 011117 68 RVHFCVRCDYPIAIYGRLNPCEH-VFCLDCAR-------------SDSMCYLCDERIQKIQTIKLMEGIFICAAPHCLKS 133 (493)
Q Consensus 68 KvhFCdICdlPI~iygRmIPCKH-VFCydCA~-------------sDktCP~Cna~VqrIEri~p~esIFIC~~~gCkRt 133 (493)
-..+|..|+..-.+ ..-|=.. ..|.+|.. .+.-|-.|-+ .++|++|+.+.|-+.
T Consensus 35 ~e~~Ct~CG~~~~~--~~HPlf~v~lC~~Ck~~y~e~~f~~DeDG~~~yC~wC~~----------Gg~l~~Cdn~~C~r~ 102 (159)
T 3a1b_A 35 IEDICISCGSLNVT--LEHPLFVGGMCQNCKNCFLECAYQYDDDGYQSYCTICCG----------GREVLMCGNNNCCRC 102 (159)
T ss_dssp GGGSBTTTCCSCCC--EECSSBSSEECHHHHHHHHHHTTCBCTTSSBSSCTTTSC----------CSEEEECSSTTTCCE
T ss_pred ccCcccCCCCcCcc--ccCCCccchhhHHHHHHHhhcccccCCCCCcceeeEecC----------CCeEEeeCCCCCCCc
Confidence 36899999864221 1111111 25666664 2245777753 478999997777666
Q ss_pred hc
Q 011117 134 FL 135 (493)
Q Consensus 134 YL 135 (493)
|=
T Consensus 103 FC 104 (159)
T 3a1b_A 103 FC 104 (159)
T ss_dssp EE
T ss_pred hh
Confidence 63
No 382
>2wbt_A B-129; zinc finger; 2.70A {Sulfolobus virus 1}
Probab=24.67 E-value=27 Score=27.32 Aligned_cols=29 Identities=24% Similarity=0.527 Sum_probs=24.0
Q ss_pred ecCCcEEEecCCchhhhhcChhHHHHhhhhhh
Q 011117 117 KLMEGIFICAAPHCLKSFLKKTEFEAHIHVSH 148 (493)
Q Consensus 117 ~p~esIFIC~~~gCkRtYLSqRDLQAHInhrH 148 (493)
+..+.-|.|.. |.|.|.+..+|..|++. |
T Consensus 69 h~~~~~~~C~~--C~k~f~~~~~l~~H~~~-H 97 (129)
T 2wbt_A 69 SKAISQFVCPL--CLMPFSSSVSLKQHIRY-T 97 (129)
T ss_dssp HHHHCSEECTT--TCCEESSHHHHHHHHHH-T
T ss_pred hCCCCCeECCC--CCcccCCHhHHHHHHHH-C
Confidence 33466799875 99999999999999865 5
No 383
>3to7_A Histone acetyltransferase ESA1; MYST family; HET: ALY COA; 1.90A {Saccharomyces cerevisiae} SCOP: d.108.1.1 PDB: 3to6_A* 1fy7_A* 1mja_A* 1mjb_A* 3to9_A* 1mj9_A*
Probab=24.65 E-value=27 Score=34.58 Aligned_cols=28 Identities=21% Similarity=0.172 Sum_probs=23.7
Q ss_pred cCCcEEEecCCchhhhhcChhHHHHhhhhh
Q 011117 118 LMEGIFICAAPHCLKSFLKKTEFEAHIHVS 147 (493)
Q Consensus 118 p~esIFIC~~~gCkRtYLSqRDLQAHInhr 147 (493)
..+.||||. .|+|.|.+..+|+.|...+
T Consensus 32 ~~~~lyiCe--~ClkY~~~~~~~~~H~~~C 59 (276)
T 3to7_A 32 DEDFIYIDD--FTLQYFGSKKQYERYRKKC 59 (276)
T ss_dssp SCCEEEECT--TTCCEESSHHHHHHHHTSC
T ss_pred CCCeEEEcc--chhhhcCCHHHHHHHhccC
Confidence 356799986 6999999999999998554
No 384
>2ehe_A Four and A half LIM domains 3; FHL-3, skeletal muscle LIM- protein 2, SLIM 2, FHL3, SLIM2, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=24.64 E-value=12 Score=28.21 Aligned_cols=12 Identities=25% Similarity=0.667 Sum_probs=8.8
Q ss_pred cccccCCCcccc
Q 011117 69 VHFCVRCDYPIA 80 (493)
Q Consensus 69 vhFCdICdlPI~ 80 (493)
...|..|+++|.
T Consensus 15 ~~~C~~C~~~I~ 26 (82)
T 2ehe_A 15 ANTCAECQQLIG 26 (82)
T ss_dssp SCBCTTTCCBCC
T ss_pred CCcCccCCCccc
Confidence 346888888887
No 385
>1g47_A Pinch protein; LIM domain, Zn finger, cell adhesion; NMR {Homo sapiens} SCOP: g.39.1.3 g.39.1.3
Probab=24.09 E-value=36 Score=25.14 Aligned_cols=48 Identities=17% Similarity=0.306 Sum_probs=27.3
Q ss_pred cccccCCCcccccccccc-c---cccccchhhhhCCCCcccchHhHhhheeeecCCcEE
Q 011117 69 VHFCVRCDYPIAIYGRLN-P---CEHVFCLDCARSDSMCYLCDERIQKIQTIKLMEGIF 123 (493)
Q Consensus 69 vhFCdICdlPI~iygRmI-P---CKHVFCydCA~sDktCP~Cna~VqrIEri~p~esIF 123 (493)
...|..|+++|..-.+++ - ..|.-|. +|..|+..+........++.+|
T Consensus 11 ~~~C~~C~~~I~~~~~~~~a~~~~~H~~CF-------~C~~C~~~L~~~~~~~~~g~~y 62 (77)
T 1g47_A 11 SATCERCKGGFAPAEKIVNSNGELYHEQCF-------VCAQCFQQFPEGLFYEFEGRKY 62 (77)
T ss_dssp CCBCSSSCCBCCSTTTCEEETTEEECTTTC-------CCTTTCCCCGGGCSEEETTEEE
T ss_pred CCCchhcCCccCCCceEEEeCccEeccccC-------eECCCCCCCCCCCeEeECCeEe
Confidence 578999999996322222 1 2344444 4556776666555444444454
No 386
>3avr_A Lysine-specific demethylase 6A; cupin superfamily, TRI/dimethyllysine demethylase, oxidoredu structural protein complex; HET: M3L OGA EDO; 1.80A {Homo sapiens} PDB: 3avs_A*
Probab=24.00 E-value=21 Score=37.86 Aligned_cols=18 Identities=17% Similarity=0.078 Sum_probs=14.2
Q ss_pred CcceEEeecCCeEEEecC
Q 011117 22 PVETVTVACPDHLVLADL 39 (493)
Q Consensus 22 ~pesVtVnc~Dh~VIA~~ 39 (493)
.|.-++++.++++||+-+
T Consensus 335 IPvyr~vQkpGd~Vi~~P 352 (531)
T 3avr_A 335 VPVYRFIQRPGDLVWINA 352 (531)
T ss_dssp CCCEEEEECTTCEEEECT
T ss_pred CCeEEEEECCCCEEEECC
Confidence 566778888888888876
No 387
>1tjl_A DNAK suppressor protein; DKSA, transcription factor, RNA polymerase, stringent response, PPGPP, riken structural genomics/proteomics initiative; 2.00A {Escherichia coli} SCOP: a.2.14.1 g.39.1.13 PDB: 3h3p_S
Probab=23.67 E-value=37 Score=30.26 Aligned_cols=29 Identities=28% Similarity=0.698 Sum_probs=20.8
Q ss_pred cccccCCCccccc-cccccccccccchhhhh
Q 011117 69 VHFCVRCDYPIAI-YGRLNPCEHVFCLDCAR 98 (493)
Q Consensus 69 vhFCdICdlPI~i-ygRmIPCKHVFCydCA~ 98 (493)
.-+|..|+.+|-. +-..+| .-.+|-+|..
T Consensus 111 yg~C~~Cg~~Ip~~Rl~a~P-~a~~Ci~Cq~ 140 (151)
T 1tjl_A 111 FGYCESCGVEIGIRRLEARP-TADLCIDCKT 140 (151)
T ss_dssp CSBCSSSSCBCCHHHHHHCT-TCCSCHHHHH
T ss_pred CceeCCCCCcchHHHHhcCC-CcchhHHHHH
Confidence 4689999999976 444566 4557777764
No 388
>2ou2_A Histone acetyltransferase htatip; structural genomics, structural genomics consortium, SGC; HET: ALY ACO; 2.30A {Homo sapiens}
Probab=23.43 E-value=28 Score=34.43 Aligned_cols=29 Identities=17% Similarity=0.400 Sum_probs=24.6
Q ss_pred cCCcEEEecCCchhhhhcChhHHHHhhhhhh
Q 011117 118 LMEGIFICAAPHCLKSFLKKTEFEAHIHVSH 148 (493)
Q Consensus 118 p~esIFIC~~~gCkRtYLSqRDLQAHInhrH 148 (493)
..+.||||. .|+|.|.+...|+.|...+-
T Consensus 30 ~~~~lyiCe--~Clky~~~~~~~~~H~~~C~ 58 (280)
T 2ou2_A 30 TLPVLYLCE--FCLKYGRSLKCLQRHLTKCD 58 (280)
T ss_dssp TSSCEEECT--TTCCEESCHHHHHHHHHHCC
T ss_pred CCCeEEECc--chhhhhCCHHHHHHHHhhCC
Confidence 357899986 69999999999999986653
No 389
>4gne_A Histone-lysine N-methyltransferase NSD3; zinc finger, transcription, nuclear protein, transf nuclear protein complex; 1.47A {Homo sapiens} PDB: 4gnd_A 4gnf_A 4gng_A*
Probab=22.89 E-value=41 Score=28.57 Aligned_cols=48 Identities=21% Similarity=0.521 Sum_probs=30.8
Q ss_pred ccccccCCCccccccccccccc--------cccchhhhh----CCCCcccchHhHhhheeeecCCcEEEec
Q 011117 68 RVHFCVRCDYPIAIYGRLNPCE--------HVFCLDCAR----SDSMCYLCDERIQKIQTIKLMEGIFICA 126 (493)
Q Consensus 68 KvhFCdICdlPI~iygRmIPCK--------HVFCydCA~----sDktCP~Cna~VqrIEri~p~esIFIC~ 126 (493)
....|.+|. ..+.||-|. |.+|+. +. .+-.|+.|.-.+ +.. ...|+|.
T Consensus 14 ~~~~C~~C~----~~G~ll~CD~~~Cp~~fH~~Cl~-L~~~P~g~W~Cp~c~C~~-----C~k-~~~~~C~ 73 (107)
T 4gne_A 14 HEDYCFQCG----DGGELVMCDKKDCPKAYHLLCLN-LTQPPYGKWECPWHQCDE-----CSS-AAVSFCE 73 (107)
T ss_dssp SCSSCTTTC----CCSEEEECCSTTCCCEECTGGGT-CSSCCSSCCCCGGGBCTT-----TCS-BCCEECS
T ss_pred CCCCCCcCC----CCCcEeEECCCCCCcccccccCc-CCcCCCCCEECCCCCCCc-----CCC-CCCcCcC
Confidence 356788887 357788886 777776 43 345799886555 332 2237766
No 390
>1x4k_A Skeletal muscle LIM-protein 3; LIM domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.39.1.3 g.39.1.3
Probab=22.55 E-value=26 Score=25.59 Aligned_cols=51 Identities=20% Similarity=0.227 Sum_probs=26.3
Q ss_pred cccccCCCcccccccccc-ccccccchhhhhCCCCcccchHhHhhheeeecCCcEE
Q 011117 69 VHFCVRCDYPIAIYGRLN-PCEHVFCLDCARSDSMCYLCDERIQKIQTIKLMEGIF 123 (493)
Q Consensus 69 vhFCdICdlPI~iygRmI-PCKHVFCydCA~sDktCP~Cna~VqrIEri~p~esIF 123 (493)
...|..|+++|....+.+ -=..+|-.+| .+|..|+..+........++.||
T Consensus 5 ~~~C~~C~~~I~~~~~~~~a~~~~~H~~C----F~C~~C~~~L~~~~~~~~~~~~y 56 (72)
T 1x4k_A 5 SSGCQECKKTIMPGTRKMEYKGSSWHETC----FICHRCQQPIGTKSFIPKDNQNF 56 (72)
T ss_dssp CCCBSSSCCCCCSSSCEEEETTEEEETTT----TCCSSSCCCCCSSSEEEETTEEE
T ss_pred CCCCccCCCcccCCceEEEECcCeecccC----CcccccCCccCCCccCccCCeEE
Confidence 457999999998532221 1122222222 24556776665544444344444
No 391
>3d00_A Tungsten formylmethanofuran dehydrogenase subunit; FWDE/GAPDH domain-like fold, structural genomics, joint CENT structural genomics; HET: MSE; 1.90A {Syntrophus aciditrophicus}
Probab=22.29 E-value=31 Score=31.56 Aligned_cols=24 Identities=21% Similarity=0.665 Sum_probs=20.3
Q ss_pred cccccCCCccccccccccccccccchhhhh
Q 011117 69 VHFCVRCDYPIAIYGRLNPCEHVFCLDCAR 98 (493)
Q Consensus 69 vhFCdICdlPI~iygRmIPCKHVFCydCA~ 98 (493)
...|++|+..+... ....|.+|+.
T Consensus 163 ~~~C~~CGE~~~~~------g~~~C~~C~~ 186 (191)
T 3d00_A 163 IVLCPQCREAYPAQ------DGELCLSCQG 186 (191)
T ss_dssp EEECTTTCCEEEGG------GCSSCHHHHT
T ss_pred CEECCcCCCChhhC------CCcCCccccC
Confidence 67899999998886 6678999986
No 392
>3a1b_A DNA (cytosine-5)-methyltransferase 3A, histone H3; zinc-finger, histone binding, chromosomal protein, DNA damag repair, DNA-binding, methylation; HET: DNA; 2.29A {Homo sapiens} PDB: 3a1a_A*
Probab=21.16 E-value=44 Score=30.59 Aligned_cols=29 Identities=24% Similarity=0.632 Sum_probs=18.1
Q ss_pred ccccCCCcccccccc-ccccccccchhhhh
Q 011117 70 HFCVRCDYPIAIYGR-LNPCEHVFCLDCAR 98 (493)
Q Consensus 70 hFCdICdlPI~iygR-mIPCKHVFCydCA~ 98 (493)
..|-+|..--..+.= .-.|..+||.+|+.
T Consensus 80 ~yC~wC~~Gg~l~~Cdn~~C~r~FC~~CI~ 109 (159)
T 3a1b_A 80 SYCTICCGGREVLMCGNNNCCRCFCVECVD 109 (159)
T ss_dssp SSCTTTSCCSEEEECSSTTTCCEEEHHHHH
T ss_pred ceeeEecCCCeEEeeCCCCCCCchhHHHHH
Confidence 567777743222111 22577899999997
No 393
>2kq9_A DNAK suppressor protein; zinc binding protein, structural genomics, PSI-2, protein ST initiative; NMR {Agrobacterium tumefaciens str}
Probab=21.04 E-value=31 Score=28.95 Aligned_cols=30 Identities=30% Similarity=0.597 Sum_probs=22.0
Q ss_pred ccccccCCCccccc-cccccccccccchhhhh
Q 011117 68 RVHFCVRCDYPIAI-YGRLNPCEHVFCLDCAR 98 (493)
Q Consensus 68 KvhFCdICdlPI~i-ygRmIPCKHVFCydCA~ 98 (493)
..-+|..|+.+|-. +-..+| .-.+|-+|..
T Consensus 80 ~yg~C~~Cg~~I~~~Rl~a~P-~a~~Ci~Cq~ 110 (112)
T 2kq9_A 80 TFGTCVKCGKRISEDRLKAVP-YTPFCQECAA 110 (112)
T ss_dssp CCSEETTTTEECCHHHHHHCS-CCSSCHHHHH
T ss_pred CcCeeCCCCCcccHHHHhcCC-CcchhHHHHh
Confidence 35799999999976 445566 5568888864
No 394
>2vpb_A Hpygo1, pygopus homolog 1; gene regulation, WNT signaling pathway, WNT signaling complex, chromosomal rearrangement, signaling protein; 1.59A {Homo sapiens} PDB: 2vpd_A 2yyr_A* 2dx8_A* 2vp7_A 2vpg_A* 2vpe_A*
Probab=20.50 E-value=36 Score=26.29 Aligned_cols=32 Identities=22% Similarity=0.284 Sum_probs=20.1
Q ss_pred cccccccCCCccccccccccccc----cccchhhhh
Q 011117 67 ERVHFCVRCDYPIAIYGRLNPCE----HVFCLDCAR 98 (493)
Q Consensus 67 EKvhFCdICdlPI~iygRmIPCK----HVFCydCA~ 98 (493)
+....|.+|..|+..-..||-|- .-|=..|..
T Consensus 6 ~~~~~C~~C~~p~~~~~~mI~CD~~C~~WfH~~Cvg 41 (65)
T 2vpb_A 6 DPVYPCGICTNEVNDDQDAILCEASCQKWFHRICTG 41 (65)
T ss_dssp ---CBCTTTCSBCCTTSCEEEBTTTTCCEEEHHHHT
T ss_pred CCcCcCccCCCccCCCCCeEecccCccccCchhccC
Confidence 34678999999988766676554 334455654
No 395
>2cor_A Pinch protein; LIM domain, particularly interesting NEW Cys- His protein, LIM and senescent cell antigen-like domains 1, structural genomics; NMR {Homo sapiens} SCOP: g.39.1.3 g.39.1.3
Probab=20.36 E-value=48 Score=25.22 Aligned_cols=49 Identities=16% Similarity=0.249 Sum_probs=26.8
Q ss_pred cccccCCCccccccccccccccccchhhhhCCCCcccchHhHhhheeeecCCcEE
Q 011117 69 VHFCVRCDYPIAIYGRLNPCEHVFCLDCARSDSMCYLCDERIQKIQTIKLMEGIF 123 (493)
Q Consensus 69 vhFCdICdlPI~iygRmIPCKHVFCydCA~sDktCP~Cna~VqrIEri~p~esIF 123 (493)
...|..|+++|...+ +.--..+|=.+| .+|..|+..+..... ..++.+|
T Consensus 15 ~~~C~~C~~~I~~~~-v~a~~~~~H~~C----F~C~~C~~~L~~~~f-~~~g~~y 63 (79)
T 2cor_A 15 KYICQKCHAIIDEQP-LIFKNDPYHPDH----FNCANCGKELTADAR-ELKGELY 63 (79)
T ss_dssp CCBCTTTCCBCCSCC-CCCSSSCCCTTT----SBCSSSCCBCCTTCE-EETTEEE
T ss_pred CCCCccCCCEecceE-EEECcceeCCCC----CEeCCCCCccCCCCE-eECCEEe
Confidence 567999999998433 211222222222 356667777765543 3345554
No 396
>4esj_A Type-2 restriction enzyme DPNI; restriction endonuclease-DNA complex, type IIM, type IIE, RE enzyme, DPNI; HET: DNA 6MA; 2.05A {Streptococcus pneumoniae}
Probab=20.33 E-value=24 Score=34.62 Aligned_cols=30 Identities=20% Similarity=0.761 Sum_probs=23.8
Q ss_pred cccccCCCc-cccccccccccccccchhhhh
Q 011117 69 VHFCVRCDY-PIAIYGRLNPCEHVFCLDCAR 98 (493)
Q Consensus 69 vhFCdICdl-PI~iygRmIPCKHVFCydCA~ 98 (493)
...|+.|+. +|..+.-.-|=.-.||..|.+
T Consensus 34 n~yCPnCG~~~l~~f~nN~PVaDF~C~~C~E 64 (257)
T 4esj_A 34 QSYCPNCGNNPLNHFENNRPVADFYCNHCSE 64 (257)
T ss_dssp HCCCTTTCCSSCEEC----CCCEEECTTTCC
T ss_pred CCcCCCCCChhhhhccCCCcccccccCCcch
Confidence 689999995 899999999999999999998
No 397
>3o36_A Transcription intermediary factor 1-alpha; TRIM24, PHD finger, bromodomain, H4K16 acetylation, breast C transcription-protein binding complex; HET: ALY; 1.70A {Homo sapiens} PDB: 3o33_A* 3o34_A* 3o35_A* 3o37_A
Probab=20.09 E-value=39 Score=29.79 Aligned_cols=10 Identities=20% Similarity=0.839 Sum_probs=6.3
Q ss_pred CCCcccchHh
Q 011117 100 DSMCYLCDER 109 (493)
Q Consensus 100 DktCP~Cna~ 109 (493)
+-.|+.|...
T Consensus 42 ~W~C~~C~~~ 51 (184)
T 3o36_A 42 EWICTFCRDL 51 (184)
T ss_dssp CCCCTTTSCS
T ss_pred CEECccccCc
Confidence 3567777654
Done!