Query 011118
Match_columns 493
No_of_seqs 120 out of 266
Neff 6.9
Searched_HMMs 46136
Date Fri Mar 29 08:19:18 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/011118.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/011118hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 PF06963 FPN1: Ferroportin1 (F 100.0 3E-108 6E-113 863.9 38.7 428 17-464 2-432 (432)
2 KOG2601 Iron transporter [Inor 100.0 2.2E-88 4.7E-93 677.6 16.4 467 8-488 18-486 (503)
3 PF05977 MFS_3: Transmembrane 100.0 3.7E-34 8E-39 310.2 33.5 387 14-477 7-397 (524)
4 PRK11195 lysophospholipid tran 99.9 1.2E-20 2.5E-25 197.7 36.3 385 17-487 3-391 (393)
5 PRK10489 enterobactin exporter 99.9 1.8E-20 4E-25 196.6 28.9 395 1-472 1-397 (417)
6 PRK06814 acylglycerophosphoeth 99.9 3.4E-20 7.3E-25 218.3 33.5 364 15-449 9-396 (1140)
7 TIGR00900 2A0121 H+ Antiporter 99.8 2.5E-18 5.4E-23 174.1 31.4 358 19-448 1-362 (365)
8 PRK08633 2-acyl-glycerophospho 99.8 1.8E-15 3.8E-20 178.0 36.6 359 14-444 6-378 (1146)
9 PRK09874 drug efflux system pr 99.7 1.8E-14 3.9E-19 149.6 38.1 362 6-451 3-375 (408)
10 PRK05122 major facilitator sup 99.7 1.8E-14 3.9E-19 149.9 35.6 383 15-483 13-396 (399)
11 PRK11646 multidrug resistance 99.7 1.8E-14 3.8E-19 151.4 34.5 354 8-451 4-361 (400)
12 PF07690 MFS_1: Major Facilita 99.7 9.4E-16 2E-20 154.7 22.6 345 22-437 1-348 (352)
13 PRK12382 putative transporter; 99.7 1.8E-13 3.9E-18 142.2 34.4 359 9-451 7-366 (392)
14 PRK12307 putative sialic acid 99.7 2.3E-13 4.9E-18 142.7 33.6 369 10-451 11-385 (426)
15 TIGR00893 2A0114 d-galactonate 99.6 2.4E-13 5.2E-18 138.1 30.6 379 34-470 11-394 (399)
16 PRK15011 sugar efflux transpor 99.6 3.9E-12 8.4E-17 132.9 40.4 362 1-449 1-366 (393)
17 PRK11551 putative 3-hydroxyphe 99.6 9.6E-13 2.1E-17 137.1 34.6 376 18-473 16-394 (406)
18 PRK15402 multidrug efflux syst 99.6 8.6E-13 1.9E-17 137.9 34.1 359 21-458 17-379 (406)
19 PRK11652 emrD multidrug resist 99.6 2.3E-12 5E-17 134.0 36.1 350 16-449 4-360 (394)
20 TIGR00901 2A0125 AmpG-related 99.6 2.2E-13 4.7E-18 139.6 28.0 325 35-435 6-356 (356)
21 TIGR00891 2A0112 putative sial 99.6 8.4E-13 1.8E-17 136.0 32.1 375 17-454 12-395 (405)
22 PRK03545 putative arabinose tr 99.6 2.7E-12 5.8E-17 133.6 35.7 350 26-465 18-371 (390)
23 PRK10213 nepI ribonucleoside t 99.6 3.2E-12 6.9E-17 134.0 36.4 333 45-465 47-382 (394)
24 PRK11102 bicyclomycin/multidru 99.6 1.5E-12 3.3E-17 133.9 32.8 371 30-480 4-376 (377)
25 cd06174 MFS The Major Facilita 99.6 2.7E-12 5.8E-17 128.6 32.2 338 20-465 2-343 (352)
26 PRK11902 ampG muropeptide tran 99.6 4.4E-12 9.4E-17 132.8 33.3 383 19-486 4-397 (402)
27 TIGR00897 2A0118 polyol permea 99.6 2.6E-12 5.6E-17 134.7 31.2 368 16-462 12-389 (402)
28 TIGR00899 2A0120 sugar efflux 99.6 9.1E-12 2E-16 127.5 34.2 344 23-450 3-350 (375)
29 PRK11043 putative transporter; 99.6 2.3E-11 5E-16 126.8 37.5 349 19-450 5-358 (401)
30 PRK11128 putative 3-phenylprop 99.6 6.8E-12 1.5E-16 130.5 33.1 349 15-452 5-358 (382)
31 TIGR00710 efflux_Bcr_CflA drug 99.6 1.6E-11 3.4E-16 126.0 35.1 350 18-446 6-358 (385)
32 PRK10091 MFS transport protein 99.6 1.3E-11 2.9E-16 128.3 33.8 375 17-479 3-380 (382)
33 PRK10054 putative transporter; 99.6 1.2E-11 2.6E-16 129.8 33.6 353 17-454 7-364 (395)
34 PRK10504 putative transporter; 99.6 1.1E-11 2.5E-16 132.0 33.6 397 10-447 3-413 (471)
35 PRK03893 putative sialic acid 99.5 1.8E-11 4E-16 131.0 34.6 389 14-451 17-430 (496)
36 TIGR00881 2A0104 phosphoglycer 99.5 1.5E-12 3.2E-17 132.3 23.8 361 25-448 3-371 (379)
37 PRK15403 multidrug efflux syst 99.5 5.5E-11 1.2E-15 125.5 36.0 377 27-485 26-408 (413)
38 PRK11663 regulatory protein Uh 99.5 3E-11 6.5E-16 128.1 32.8 396 22-482 28-430 (434)
39 TIGR00895 2A0115 benzoate tran 99.5 4.1E-12 8.8E-17 130.2 24.6 367 22-445 22-396 (398)
40 PRK09705 cynX putative cyanate 99.5 1.8E-10 3.9E-15 120.6 35.7 369 22-479 10-385 (393)
41 PRK10473 multidrug efflux syst 99.5 9.3E-11 2E-15 121.9 33.0 273 17-366 3-277 (392)
42 PRK11273 glpT sn-glycerol-3-ph 99.5 9.1E-11 2E-15 125.1 33.5 402 17-481 25-441 (452)
43 TIGR00711 efflux_EmrB drug res 99.5 6E-11 1.3E-15 126.3 31.0 394 18-449 3-410 (485)
44 TIGR00892 2A0113 monocarboxyla 99.5 7.3E-11 1.6E-15 126.2 31.5 385 5-451 3-397 (455)
45 PRK14995 methyl viologen resis 99.5 2.3E-10 4.9E-15 123.7 35.5 386 18-447 7-411 (495)
46 TIGR00902 2A0127 phenyl propri 99.5 4.1E-10 8.9E-15 117.2 34.8 349 20-452 7-358 (382)
47 TIGR00890 2A0111 Oxalate/Forma 99.5 2.3E-10 5.1E-15 116.1 32.2 333 35-450 21-358 (377)
48 PRK09528 lacY galactoside perm 99.5 1E-10 2.2E-15 123.1 30.4 364 16-451 9-380 (420)
49 TIGR00883 2A0106 metabolite-pr 99.4 2.9E-10 6.2E-15 116.1 32.1 138 310-452 236-378 (394)
50 TIGR00792 gph sugar (Glycoside 99.4 6.3E-10 1.4E-14 116.9 31.8 350 25-447 7-378 (437)
51 TIGR00879 SP MFS transporter, 99.4 9.1E-11 2E-15 122.7 24.5 386 25-449 36-445 (481)
52 TIGR02718 sider_RhtX_FptX side 99.3 1E-08 2.2E-13 106.7 36.5 347 27-449 11-366 (390)
53 TIGR00889 2A0110 nucleoside tr 99.3 2.5E-09 5.5E-14 113.2 32.2 184 290-476 204-403 (418)
54 PRK03699 putative transporter; 99.3 1E-08 2.2E-13 107.1 36.2 361 17-466 7-372 (394)
55 TIGR00882 2A0105 oligosacchari 99.3 2.6E-09 5.5E-14 111.5 31.3 363 17-451 2-372 (396)
56 TIGR00886 2A0108 nitrite extru 99.3 9.6E-10 2.1E-14 112.3 27.0 346 17-435 1-364 (366)
57 PRK09556 uhpT sugar phosphate 99.3 3.5E-09 7.7E-14 113.4 32.2 369 21-448 33-411 (467)
58 PRK03633 putative MFS family t 99.3 1.1E-08 2.4E-13 106.3 33.4 341 16-449 5-347 (381)
59 PRK10406 alpha-ketoglutarate t 99.3 3.1E-08 6.7E-13 104.9 36.6 346 23-446 28-396 (432)
60 TIGR00712 glpT glycerol-3-phos 99.3 8.9E-09 1.9E-13 109.3 31.9 372 20-451 26-410 (438)
61 PRK11010 ampG muropeptide tran 99.3 2.3E-08 5.1E-13 108.2 35.6 352 22-450 17-379 (491)
62 PRK15075 citrate-proton sympor 99.3 5.3E-08 1.2E-12 103.2 37.3 361 17-451 15-396 (434)
63 TIGR00896 CynX cyanate transpo 99.2 1.1E-08 2.4E-13 104.9 28.5 325 36-450 19-349 (355)
64 PRK10429 melibiose:sodium symp 99.2 1.7E-08 3.7E-13 108.5 30.8 358 24-447 13-391 (473)
65 PRK09848 glucuronide transport 99.2 3.5E-08 7.7E-13 104.9 32.8 358 14-445 5-384 (448)
66 PRK10642 proline/glycine betai 99.2 7.2E-08 1.6E-12 104.1 35.4 134 311-449 268-404 (490)
67 TIGR02332 HpaX 4-hydroxyphenyl 99.2 2.2E-08 4.9E-13 105.6 29.9 382 14-455 5-401 (412)
68 PF13347 MFS_2: MFS/sugar tran 99.2 1.1E-08 2.4E-13 108.2 27.1 334 39-446 23-381 (428)
69 PRK10133 L-fucose transporter; 99.2 2.7E-07 5.9E-12 98.5 37.8 357 17-450 26-408 (438)
70 COG2814 AraJ Arabinose efflux 99.2 2E-07 4.3E-12 97.7 35.3 357 21-470 13-381 (394)
71 TIGR00903 2A0129 major facilit 99.2 4.6E-08 1E-12 102.1 30.7 350 28-468 2-359 (368)
72 TIGR00894 2A0114euk Na(+)-depe 99.2 7.1E-09 1.5E-13 110.6 25.1 362 50-473 73-448 (465)
73 PF03825 Nuc_H_symport: Nucleo 99.1 4.4E-07 9.6E-12 96.0 35.9 190 290-481 203-399 (400)
74 PRK09952 shikimate transporter 99.1 1.4E-06 3E-11 92.7 39.6 135 312-449 269-406 (438)
75 PRK09669 putative symporter Ya 99.1 2.3E-07 5.1E-12 98.6 33.1 347 25-446 13-385 (444)
76 PRK10077 xylE D-xylose transpo 99.1 3.1E-07 6.7E-12 97.8 32.8 126 319-447 297-424 (479)
77 TIGR00924 yjdL_sub1_fam amino 99.0 7.3E-07 1.6E-11 96.2 34.1 388 15-436 8-429 (475)
78 TIGR00898 2A0119 cation transp 99.0 6.5E-08 1.4E-12 104.1 24.9 366 52-481 126-500 (505)
79 TIGR00885 fucP L-fucose:H+ sym 99.0 2.2E-06 4.7E-11 90.7 35.6 348 19-449 5-381 (410)
80 TIGR00788 fbt folate/biopterin 99.0 4E-08 8.7E-13 105.8 22.7 382 19-460 31-428 (468)
81 PLN00028 nitrate transmembrane 99.0 1.4E-06 3.1E-11 93.8 33.5 270 18-357 37-317 (476)
82 TIGR01299 synapt_SV2 synaptic 99.0 1.4E-06 3.1E-11 98.8 32.7 154 17-193 163-319 (742)
83 PF11700 ATG22: Vacuole efflux 98.9 2.5E-06 5.4E-11 92.3 33.1 164 290-458 277-451 (477)
84 COG0738 FucP Fucose permease [ 98.9 7.4E-06 1.6E-10 85.5 33.3 394 14-485 10-419 (422)
85 PRK11462 putative transporter; 98.9 8.2E-06 1.8E-10 87.7 33.5 328 40-444 32-382 (460)
86 KOG2615 Permease of the major 98.8 4.3E-07 9.3E-12 93.8 19.8 350 35-453 47-418 (451)
87 COG2271 UhpC Sugar phosphate p 98.8 1.3E-05 2.8E-10 84.1 29.2 396 19-476 31-436 (448)
88 PRK09584 tppB putative tripept 98.7 2.9E-05 6.3E-10 84.5 32.3 163 17-199 21-184 (500)
89 TIGR00887 2A0109 phosphate:H+ 98.7 0.00013 2.8E-09 79.1 35.0 152 22-190 21-176 (502)
90 COG2211 MelB Na+/melibiose sym 98.7 2.2E-05 4.8E-10 84.1 28.3 342 25-436 20-378 (467)
91 PRK10207 dipeptide/tripeptide 98.6 8.9E-05 1.9E-09 80.5 33.1 162 17-198 14-176 (489)
92 PRK15034 nitrate/nitrite trans 98.6 0.00013 2.8E-09 78.6 32.3 76 17-92 34-109 (462)
93 COG2270 Permeases of the major 98.6 1.8E-05 3.9E-10 83.1 24.6 158 288-453 246-407 (438)
94 PF03209 PUCC: PUCC protein; 98.4 0.00027 5.9E-09 74.2 27.8 318 69-447 30-361 (403)
95 PF01306 LacY_symp: LacY proto 98.3 0.00017 3.6E-09 76.5 23.6 184 291-485 217-410 (412)
96 PRK15462 dipeptide/tripeptide 98.1 0.014 2.9E-07 63.8 34.5 164 16-199 8-172 (493)
97 TIGR00805 oat sodium-independe 98.1 6.2E-05 1.3E-09 84.4 16.1 73 286-358 322-397 (633)
98 COG2807 CynX Cyanate permease 98.1 0.0079 1.7E-07 62.5 29.8 361 20-474 11-382 (395)
99 TIGR01272 gluP glucose/galacto 98.1 0.0031 6.7E-08 64.3 26.6 151 291-451 137-292 (310)
100 TIGR00900 2A0121 H+ Antiporter 98.1 0.00014 3.1E-09 73.4 16.6 132 313-447 19-152 (365)
101 TIGR00710 efflux_Bcr_CflA drug 98.0 0.00022 4.9E-09 73.0 17.2 131 312-449 24-155 (385)
102 PRK11646 multidrug resistance 98.0 0.00038 8.3E-09 73.2 18.6 128 313-447 30-159 (400)
103 PRK10489 enterobactin exporter 98.0 8.9E-05 1.9E-09 77.9 13.2 160 287-448 10-171 (417)
104 PF07690 MFS_1: Major Facilita 98.0 0.00025 5.4E-09 71.3 15.9 127 314-447 17-145 (352)
105 TIGR00893 2A0114 d-galactonate 97.9 0.00016 3.5E-09 73.2 14.3 131 312-449 13-144 (399)
106 PRK11663 regulatory protein Uh 97.9 0.00044 9.6E-09 73.4 18.1 138 304-448 34-172 (434)
107 PRK11551 putative 3-hydroxyphe 97.9 0.00073 1.6E-08 70.4 18.8 127 311-444 33-159 (406)
108 cd06174 MFS The Major Facilita 97.9 0.00079 1.7E-08 67.2 18.2 131 311-448 17-148 (352)
109 TIGR00881 2A0104 phosphoglycer 97.9 0.00012 2.5E-09 74.3 12.0 130 304-440 6-135 (379)
110 TIGR00895 2A0115 benzoate tran 97.9 0.00049 1.1E-08 70.3 16.5 130 314-450 38-168 (398)
111 KOG0569 Permease of the major 97.9 0.043 9.2E-07 59.6 31.5 149 285-436 256-416 (485)
112 PF03092 BT1: BT1 family; Int 97.8 0.005 1.1E-07 65.9 23.2 366 37-464 9-402 (433)
113 PRK10054 putative transporter; 97.8 0.002 4.4E-08 67.6 19.5 129 312-447 26-156 (395)
114 PRK05122 major facilitator sup 97.8 0.0012 2.5E-08 68.7 17.6 136 313-448 35-173 (399)
115 PRK03633 putative MFS family t 97.8 0.0017 3.7E-08 67.4 18.7 131 311-448 24-155 (381)
116 TIGR00712 glpT glycerol-3-phos 97.8 0.00059 1.3E-08 72.5 15.4 126 317-445 50-176 (438)
117 PRK11102 bicyclomycin/multidru 97.8 0.00068 1.5E-08 69.7 15.3 128 313-447 11-139 (377)
118 KOG2816 Predicted transporter 97.7 0.002 4.4E-08 69.5 19.0 126 303-437 250-379 (463)
119 PRK12382 putative transporter; 97.7 0.0024 5.2E-08 66.3 18.9 136 312-447 34-172 (392)
120 KOG1330 Sugar transporter/spin 97.7 0.00025 5.5E-09 75.3 11.4 75 25-99 37-114 (493)
121 TIGR02332 HpaX 4-hydroxyphenyl 97.7 0.0018 3.8E-08 68.4 17.7 129 311-447 26-156 (412)
122 PRK10473 multidrug efflux syst 97.7 0.0026 5.6E-08 66.0 18.7 121 316-443 26-146 (392)
123 KOG2504 Monocarboxylate transp 97.7 0.01 2.2E-07 64.9 23.8 388 45-474 73-475 (509)
124 TIGR00897 2A0118 polyol permea 97.7 0.003 6.4E-08 66.2 18.7 132 315-449 35-168 (402)
125 TIGR00891 2A0112 putative sial 97.7 0.0036 7.8E-08 64.3 18.9 129 312-447 31-160 (405)
126 PRK10091 MFS transport protein 97.6 0.0027 5.9E-08 66.0 18.0 130 310-446 20-150 (382)
127 TIGR00885 fucP L-fucose:H+ sym 97.6 0.0041 8.8E-08 65.9 19.0 129 315-447 25-154 (410)
128 COG2223 NarK Nitrate/nitrite t 97.6 0.14 3E-06 54.3 30.0 380 14-476 8-403 (417)
129 KOG2532 Permease of the major 97.6 0.036 7.8E-07 60.1 25.9 359 52-475 72-447 (466)
130 TIGR00711 efflux_EmrB drug res 97.6 0.0029 6.4E-08 67.3 17.2 129 314-449 23-152 (485)
131 PRK10504 putative transporter; 97.6 0.0045 9.9E-08 66.0 18.5 132 311-449 28-160 (471)
132 PRK03699 putative transporter; 97.5 0.0075 1.6E-07 63.0 19.6 129 310-446 24-154 (394)
133 TIGR00886 2A0108 nitrite extru 97.5 0.0056 1.2E-07 62.4 18.0 133 307-446 15-149 (366)
134 PRK03893 putative sialic acid 97.5 0.0084 1.8E-07 64.2 19.4 127 315-448 42-169 (496)
135 PRK11902 ampG muropeptide tran 97.5 0.0082 1.8E-07 62.8 18.8 140 302-447 4-154 (402)
136 PRK10213 nepI ribonucleoside t 97.5 0.0092 2E-07 62.6 19.0 128 313-447 40-168 (394)
137 TIGR00806 rfc RFC reduced fola 97.5 0.079 1.7E-06 57.5 26.0 133 36-194 45-178 (511)
138 TIGR01299 synapt_SV2 synaptic 97.4 0.0082 1.8E-07 68.6 19.5 119 312-437 186-304 (742)
139 PRK12307 putative sialic acid 97.4 0.012 2.5E-07 61.7 19.5 111 321-438 46-156 (426)
140 PRK03545 putative arabinose tr 97.4 0.0087 1.9E-07 62.2 18.4 126 315-447 31-157 (390)
141 KOG2533 Permease of the major 97.4 0.021 4.5E-07 62.3 21.6 305 56-422 84-401 (495)
142 TIGR01301 GPH_sucrose GPH fami 97.4 0.29 6.3E-06 53.3 39.4 131 48-188 34-175 (477)
143 PRK09528 lacY galactoside perm 97.4 0.0045 9.8E-08 65.1 16.1 77 289-365 5-83 (420)
144 TIGR00899 2A0120 sugar efflux 97.4 0.0078 1.7E-07 61.4 17.3 163 17-203 199-361 (375)
145 TIGR00924 yjdL_sub1_fam amino 97.4 0.0094 2E-07 64.5 18.4 173 291-471 6-188 (475)
146 PRK08633 2-acyl-glycerophospho 97.4 0.0069 1.5E-07 71.9 18.9 154 291-448 6-164 (1146)
147 TIGR00890 2A0111 Oxalate/Forma 97.3 0.012 2.5E-07 59.6 17.6 119 310-436 20-138 (377)
148 PRK09705 cynX putative cyanate 97.3 0.014 3E-07 61.1 18.6 131 311-449 27-158 (393)
149 PLN00028 nitrate transmembrane 97.3 0.019 4.1E-07 61.9 19.7 125 311-444 54-180 (476)
150 TIGR00901 2A0125 AmpG-related 97.3 0.012 2.7E-07 60.0 17.4 131 313-449 8-145 (356)
151 PRK11652 emrD multidrug resist 97.3 0.017 3.7E-07 60.0 18.7 148 293-447 4-156 (394)
152 PRK15402 multidrug efflux syst 97.3 0.018 3.8E-07 60.2 18.8 130 312-448 32-162 (406)
153 TIGR00880 2_A_01_02 Multidrug 97.3 0.0025 5.4E-08 54.6 10.4 107 336-449 6-113 (141)
154 PRK11043 putative transporter; 97.3 0.022 4.7E-07 59.3 18.9 126 316-448 29-155 (401)
155 PRK09874 drug efflux system pr 97.3 0.017 3.6E-07 59.9 18.0 127 312-448 33-167 (408)
156 PRK15462 dipeptide/tripeptide 97.2 0.025 5.3E-07 61.7 19.5 136 307-448 23-163 (493)
157 PRK11195 lysophospholipid tran 97.2 0.011 2.4E-07 61.9 16.5 123 316-448 26-149 (393)
158 PRK11273 glpT sn-glycerol-3-ph 97.2 0.011 2.4E-07 63.1 16.5 118 316-436 51-168 (452)
159 TIGR00879 SP MFS transporter, 97.2 0.014 2.9E-07 61.0 16.5 116 325-444 68-183 (481)
160 PRK10133 L-fucose transporter; 97.2 0.039 8.5E-07 59.0 20.2 123 312-438 45-167 (438)
161 PF06609 TRI12: Fungal trichot 97.1 0.43 9.4E-06 53.3 28.2 136 294-436 310-453 (599)
162 TIGR00896 CynX cyanate transpo 97.1 0.019 4E-07 58.8 16.5 128 312-448 19-147 (355)
163 KOG3764 Vesicular amine transp 97.1 0.017 3.6E-07 60.8 15.5 293 50-423 103-396 (464)
164 PRK10077 xylE D-xylose transpo 97.1 0.031 6.7E-07 59.5 18.1 122 323-444 50-176 (479)
165 PRK11010 ampG muropeptide tran 97.0 0.036 7.7E-07 60.2 18.5 144 312-463 31-181 (491)
166 TIGR00903 2A0129 major facilit 97.0 0.029 6.4E-07 58.6 17.1 138 311-459 9-147 (368)
167 TIGR00892 2A0113 monocarboxyla 97.0 0.019 4.1E-07 61.5 16.0 153 19-193 243-397 (455)
168 PRK14995 methyl viologen resis 97.0 0.046 9.9E-07 59.2 18.9 130 313-449 26-157 (495)
169 TIGR00880 2_A_01_02 Multidrug 97.0 0.0093 2E-07 51.0 10.8 123 63-208 8-130 (141)
170 TIGR00887 2A0109 phosphate:H+ 97.0 0.053 1.1E-06 58.7 19.1 116 324-442 52-169 (502)
171 PRK10406 alpha-ketoglutarate t 96.9 0.087 1.9E-06 55.8 20.0 116 324-442 56-178 (432)
172 PRK15011 sugar efflux transpor 96.9 0.055 1.2E-06 56.5 18.2 154 22-199 221-374 (393)
173 PRK09556 uhpT sugar phosphate 96.9 0.011 2.5E-07 63.2 13.2 137 299-437 35-171 (467)
174 PF05977 MFS_3: Transmembrane 96.9 0.031 6.7E-07 61.5 16.7 155 291-448 7-164 (524)
175 PRK15034 nitrate/nitrite trans 96.9 0.077 1.7E-06 57.4 19.1 118 310-436 51-175 (462)
176 PTZ00207 hypothetical protein; 96.9 0.047 1E-06 60.8 17.7 121 311-437 45-168 (591)
177 KOG4686 Predicted sugar transp 96.8 0.48 1E-05 48.2 22.4 181 294-483 264-451 (459)
178 TIGR00894 2A0114euk Na(+)-depe 96.8 0.015 3.2E-07 62.1 12.8 121 322-447 70-191 (465)
179 PRK15403 multidrug efflux syst 96.7 0.086 1.9E-06 55.7 17.7 121 319-447 42-164 (413)
180 TIGR00889 2A0110 nucleoside tr 96.7 0.051 1.1E-06 57.6 15.7 122 53-193 251-373 (418)
181 TIGR00792 gph sugar (Glycoside 96.6 0.058 1.3E-06 56.6 15.1 161 17-194 222-383 (437)
182 TIGR00883 2A0106 metabolite-pr 96.5 0.045 9.7E-07 55.6 13.8 71 19-89 221-291 (394)
183 KOG0254 Predicted transporter 96.5 1.7 3.8E-05 47.3 30.2 118 317-438 319-445 (513)
184 PF01770 Folate_carrier: Reduc 96.5 1.2 2.5E-05 47.6 24.1 111 50-193 44-157 (412)
185 PRK10207 dipeptide/tripeptide 96.4 0.19 4.2E-06 54.6 18.5 137 307-449 28-169 (489)
186 PRK09584 tppB putative tripept 96.4 0.33 7.1E-06 52.9 20.0 152 292-449 18-176 (500)
187 KOG0255 Synaptic vesicle trans 96.3 2.1 4.4E-05 46.5 32.0 51 46-96 111-161 (521)
188 TIGR00806 rfc RFC reduced fola 96.3 0.11 2.5E-06 56.2 15.7 156 315-481 47-208 (511)
189 PRK09952 shikimate transporter 96.3 0.37 7.9E-06 51.3 19.6 110 324-437 56-174 (438)
190 PRK11128 putative 3-phenylprop 96.3 0.13 2.8E-06 53.4 15.9 46 312-357 23-68 (382)
191 TIGR00882 2A0105 oligosacchari 96.3 0.18 3.8E-06 52.5 16.9 56 311-366 20-76 (396)
192 PF05631 DUF791: Protein of un 96.3 0.68 1.5E-05 48.3 20.5 77 17-95 34-111 (354)
193 TIGR00898 2A0119 cation transp 96.3 0.093 2E-06 56.4 14.9 116 322-444 118-236 (505)
194 TIGR01301 GPH_sucrose GPH fami 96.2 0.15 3.2E-06 55.5 16.2 158 314-474 25-217 (477)
195 TIGR02718 sider_RhtX_FptX side 96.1 0.3 6.5E-06 50.7 17.2 148 299-449 3-159 (390)
196 PF11700 ATG22: Vacuole efflux 96.0 0.41 8.8E-06 52.1 18.5 181 17-219 281-467 (477)
197 PRK15075 citrate-proton sympor 96.0 0.43 9.3E-06 50.5 18.4 122 311-436 33-165 (434)
198 PF13347 MFS_2: MFS/sugar tran 95.9 0.064 1.4E-06 56.7 11.4 79 17-96 225-303 (428)
199 PRK06814 acylglycerophosphoeth 95.8 0.36 7.9E-06 57.6 18.3 118 328-449 52-170 (1140)
200 PRK10642 proline/glycine betai 95.7 1.1 2.4E-05 48.4 20.3 98 334-434 63-164 (490)
201 TIGR00902 2A0127 phenyl propri 95.6 0.63 1.4E-05 48.3 17.3 46 312-357 23-68 (382)
202 KOG0254 Predicted transporter 95.5 0.28 6.1E-06 53.5 14.6 137 329-472 90-228 (513)
203 COG2814 AraJ Arabinose efflux 95.5 1.1 2.4E-05 47.5 18.4 161 293-461 9-178 (394)
204 PF01306 LacY_symp: LacY proto 95.4 0.16 3.5E-06 54.1 11.9 76 291-366 4-81 (412)
205 KOG2532 Permease of the major 95.0 0.37 8E-06 52.3 13.5 129 322-457 67-196 (466)
206 KOG0569 Permease of the major 95.0 0.84 1.8E-05 49.7 16.1 128 331-462 63-192 (485)
207 PRK09848 glucuronide transport 94.9 0.9 2E-05 48.2 16.0 160 17-194 228-391 (448)
208 TIGR00805 oat sodium-independe 94.7 0.3 6.6E-06 55.0 12.2 135 310-444 49-228 (633)
209 COG2271 UhpC Sugar phosphate p 94.6 0.37 7.9E-06 51.3 11.7 168 296-471 32-203 (448)
210 PF12832 MFS_1_like: MFS_1 lik 94.5 0.25 5.4E-06 40.0 8.2 52 312-363 19-70 (77)
211 PRK10429 melibiose:sodium symp 94.4 1.1 2.4E-05 48.1 15.4 119 314-436 27-155 (473)
212 COG2223 NarK Nitrate/nitrite t 93.0 2.1 4.5E-05 45.6 13.8 141 295-444 15-160 (417)
213 PRK09669 putative symporter Ya 92.6 2.5 5.4E-05 44.8 14.3 118 316-436 32-158 (444)
214 COG2807 CynX Cyanate permease 92.5 7.9 0.00017 40.7 17.0 165 311-487 30-197 (395)
215 PF06609 TRI12: Fungal trichot 91.9 6.8 0.00015 43.9 16.9 133 289-430 35-172 (599)
216 KOG2563 Permease of the major 91.1 26 0.00056 38.0 20.5 162 303-470 272-446 (480)
217 COG0738 FucP Fucose permease [ 90.9 6.6 0.00014 41.8 14.6 120 313-436 32-152 (422)
218 PF00083 Sugar_tr: Sugar (and 90.7 0.00041 8.8E-09 73.4 -17.2 125 321-451 281-413 (451)
219 PF06813 Nodulin-like: Nodulin 90.7 15 0.00032 36.6 16.3 145 311-465 20-172 (250)
220 PF05978 UNC-93: Ion channel r 89.9 8.1 0.00017 35.6 12.8 96 329-436 42-137 (156)
221 TIGR01272 gluP glucose/galacto 89.9 24 0.00053 35.7 18.0 133 40-198 163-297 (310)
222 KOG2325 Predicted transporter/ 88.9 13 0.00029 40.5 15.5 81 399-479 399-479 (488)
223 COG0477 ProP Permeases of the 88.4 21 0.00045 33.5 15.1 71 22-92 7-78 (338)
224 TIGR00788 fbt folate/biopterin 87.8 21 0.00046 38.5 16.4 129 315-449 47-184 (468)
225 KOG4686 Predicted sugar transp 87.7 6.7 0.00015 40.2 11.3 167 3-193 245-416 (459)
226 COG4262 Predicted spermidine s 86.1 40 0.00086 35.6 16.0 171 17-219 7-194 (508)
227 COG2270 Permeases of the major 85.8 8.9 0.00019 41.0 11.6 158 18-199 253-412 (438)
228 TIGR00769 AAA ADP/ATP carrier 85.6 60 0.0013 35.5 31.8 187 283-474 253-466 (472)
229 KOG0255 Synaptic vesicle trans 84.7 16 0.00036 39.5 13.7 112 324-444 114-226 (521)
230 PTZ00207 hypothetical protein; 84.5 66 0.0014 36.1 18.4 150 21-190 29-181 (591)
231 PRK11462 putative transporter; 84.5 31 0.00068 37.0 15.6 118 316-436 33-158 (460)
232 PF00083 Sugar_tr: Sugar (and 84.1 0.046 1E-06 57.7 -6.4 120 326-449 44-163 (451)
233 TIGR00926 2A1704 Peptide:H+ sy 83.5 22 0.00047 40.4 14.3 52 312-366 6-62 (654)
234 KOG1330 Sugar transporter/spin 83.0 1.5 3.2E-05 47.4 4.4 107 323-436 63-169 (493)
235 KOG3762 Predicted transporter 82.3 6.4 0.00014 43.5 8.9 140 315-465 393-538 (618)
236 PF03825 Nuc_H_symport: Nucleo 81.7 76 0.0016 33.6 20.4 54 305-358 13-67 (400)
237 KOG3626 Organic anion transpor 78.4 19 0.00042 41.2 11.5 79 288-366 386-469 (735)
238 KOG0252 Inorganic phosphate tr 77.9 10 0.00022 41.2 8.6 167 308-474 58-243 (538)
239 PF12832 MFS_1_like: MFS_1 lik 76.2 3.6 7.7E-05 33.2 3.7 48 41-89 24-71 (77)
240 PF03219 TLC: TLC ATP/ADP tran 76.0 1.3E+02 0.0028 33.1 20.2 82 283-365 269-356 (491)
241 KOG2504 Monocarboxylate transp 73.9 53 0.0012 36.1 13.2 147 310-463 63-210 (509)
242 PRK03612 spermidine synthase; 72.5 1.6E+02 0.0034 32.5 21.6 174 18-210 15-191 (521)
243 PF06779 DUF1228: Protein of u 70.4 41 0.00089 27.8 8.7 56 311-366 10-65 (85)
244 KOG2325 Predicted transporter/ 69.1 68 0.0015 35.2 12.4 176 297-474 37-228 (488)
245 COG2211 MelB Na+/melibiose sym 65.3 82 0.0018 34.3 12.1 154 319-474 39-204 (467)
246 PF05631 DUF791: Protein of un 63.7 2E+02 0.0043 30.3 16.7 42 322-363 63-104 (354)
247 KOG3762 Predicted transporter 63.1 11 0.00024 41.7 4.9 54 313-366 31-84 (618)
248 KOG3764 Vesicular amine transp 61.0 72 0.0016 34.3 10.3 112 323-442 101-214 (464)
249 COG3263 NhaP-type Na+/H+ and K 60.7 1.5E+02 0.0033 32.2 12.6 99 334-456 194-297 (574)
250 PF03092 BT1: BT1 family; Int 56.5 2.6E+02 0.0057 29.8 14.3 137 316-457 12-158 (433)
251 PF04884 DUF647: Vitamin B6 ph 55.5 2.2E+02 0.0047 28.5 12.2 114 61-193 85-198 (250)
252 COG4232 Thiol:disulfide interc 53.8 71 0.0015 35.6 9.2 73 284-356 235-317 (569)
253 KOG2615 Permease of the major 52.6 1.7E+02 0.0038 31.4 11.4 131 303-446 42-179 (451)
254 KOG2533 Permease of the major 51.7 3.6E+02 0.0077 29.7 14.4 115 323-445 76-192 (495)
255 PF06796 NapE: Periplasmic nit 50.2 67 0.0014 24.5 5.9 23 51-73 33-55 (56)
256 PF13955 Fst_toxin: Toxin Fst, 46.8 28 0.00061 21.1 2.7 17 177-193 2-18 (21)
257 PF01169 UPF0016: Uncharacteri 46.0 90 0.0019 25.3 6.6 62 23-86 5-67 (78)
258 TIGR02230 ATPase_gene1 F0F1-AT 44.3 37 0.00081 29.0 4.2 28 52-80 42-69 (100)
259 PF03137 OATP: Organic Anion T 43.3 7.9 0.00017 42.9 0.0 79 284-362 295-376 (539)
260 COG3104 PTR2 Dipeptide/tripept 42.7 5E+02 0.011 28.6 26.2 92 383-474 389-487 (498)
261 COG3104 PTR2 Dipeptide/tripept 40.1 5.1E+02 0.011 28.6 13.0 173 291-475 17-204 (498)
262 TIGR02973 nitrate_rd_NapE peri 39.0 89 0.0019 22.4 4.7 23 51-73 20-42 (42)
263 PF03839 Sec62: Translocation 37.6 78 0.0017 31.1 5.9 70 329-405 109-180 (224)
264 TIGR01667 YCCS_YHJK integral m 37.4 2.2E+02 0.0048 32.8 10.3 53 31-85 3-55 (701)
265 TIGR02972 TMAO_torE trimethyla 34.8 1.1E+02 0.0023 22.6 4.7 23 51-73 25-47 (47)
266 KOG0253 Synaptic vesicle trans 34.8 3.4E+02 0.0074 29.3 10.3 186 4-212 309-521 (528)
267 PF14986 DUF4514: Domain of un 32.4 28 0.00062 26.1 1.5 36 451-486 18-53 (61)
268 COG0670 Integral membrane prot 29.4 5.6E+02 0.012 25.2 16.6 97 310-413 99-197 (233)
269 PF10856 DUF2678: Protein of u 28.4 39 0.00085 29.6 1.9 56 424-481 29-86 (118)
270 KOG2563 Permease of the major 28.1 2.1E+02 0.0046 31.2 7.7 84 397-481 274-358 (480)
271 TIGR03750 conj_TIGR03750 conju 26.9 2.6E+02 0.0057 24.4 6.7 25 323-347 16-40 (111)
272 PF03209 PUCC: PUCC protein; 26.9 8.1E+02 0.018 26.3 15.9 60 395-454 96-156 (403)
273 PRK03612 spermidine synthase; 26.6 8.9E+02 0.019 26.7 18.1 46 422-467 143-190 (521)
274 PF09577 Spore_YpjB: Sporulati 26.4 1.3E+02 0.0028 29.7 5.3 56 417-480 168-224 (232)
275 TIGR01666 YCCS hypothetical me 22.6 6E+02 0.013 29.3 10.5 53 31-85 3-55 (704)
No 1
>PF06963 FPN1: Ferroportin1 (FPN1); InterPro: IPR009716 This entry represents the solute carrier family 40 member 1 family of proteins, also known as Ferroportin 1. It is thought to be involved in iron export from duodenal epithelial cells and also in transfer of iron between maternal and fetal circulation. This family of proteins is known to be localised in the basolateral membrane of polarized epithelial cells [].; GO: 0005381 iron ion transmembrane transporter activity, 0034755 iron ion transmembrane transport, 0016021 integral to membrane
Probab=100.00 E-value=2.7e-108 Score=863.91 Aligned_cols=428 Identities=45% Similarity=0.786 Sum_probs=378.4
Q ss_pred hhHHHHHHHHHHHHHhhHHHHHHHHHHHHHhCCCchHHHHHHHHHHHHHHHhhhccceeeecccchhHHHHHHHHHHHHH
Q 011118 17 FLTTYLYVAHFLARWGARMWEFSVGLYMISVWPDSLLFAAIYGAVESASIALFGPIVGHWVDKLTYVKVLQIWLVTQNLS 96 (493)
Q Consensus 17 ~~~~~L~~s~~lS~~Gdr~~~Fa~~L~lv~l~~~sll~~sv~gl~~~l~~llfg~~vG~~vDr~~R~~v~~~~~~~q~~~ 96 (493)
|..++||+||++|+||||||||++|+++++++|+|++|+|+||++++++.++|||.+|+|+||+||+|+++.+++.||++
T Consensus 2 ~~~~~Ly~sh~ls~w~dR~w~Fa~~L~L~~i~p~sLl~~siygl~~~~~~~~f~~~vG~~iD~~~Rl~~~~~~l~~Qn~s 81 (432)
T PF06963_consen 2 RALWRLYLSHFLSTWGDRMWEFAVPLFLISIFPGSLLPVSIYGLVRSLSAILFGPWVGRWIDRSPRLKVIRTSLVVQNLS 81 (432)
T ss_pred chHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCcHHHHHHHHHHHHHHHHhhHHHHHHHhCCcchhhHHHHHHHHHHH
Confidence 57899999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHhhcccccchhHHHHHHHHHHHHHHHHHHhhhhhhhhhhccceEEEecCCCChhhhhhhhhHHHhHHHH
Q 011118 97 FIVAGVSVITLLFFSSLKSTNFIAFVLLVILTNISGAVGVISTLAGTILIEREWVVVISEGHPPEALTKMNSIIRRIDLT 176 (493)
Q Consensus 97 v~~s~~~~~~~l~~~~~~~~~~~~~~~l~~~~~~~g~~~~l~~~a~~iaieRDWvv~i~~~~~~~~L~~~Na~mrriDl~ 176 (493)
|++||+++++++........+...+..++++.+++||++++++++++++|||||||+|+++|+ ++|+++||+||||||+
T Consensus 82 v~~s~~~~~~l~~~~~~~~~~~~~~~~l~~~~~~~~~i~~Las~~~~iavERDWVvvi~~~~~-~~La~~NA~mRRIDL~ 160 (432)
T PF06963_consen 82 VAASCALFLLLLSYPSSSSQSSWLFIALFALLILLGAIERLASIANTIAVERDWVVVIAGGDP-GALARMNATMRRIDLF 160 (432)
T ss_pred HHHHHHHHHHHHhCCccccccchHHHHHHHHHHHHHHHHHHHHhhhhheeccchhhhhcCCCh-hhHHHHHHHHHHHHHH
Confidence 999999876655432222111223345555666789999999999999999999999997776 8999999999999999
Q ss_pred HHhhhhHHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCcchhhhhhhhccCCCcccccccCCcccccccc
Q 011118 177 CKLLAPAITGFIISFVSLQASAMTLAIWTTVTVWVEYWLFMSVYKGIPALAESSQRRIRRSMPIDMEQSTSMPRERESLL 256 (493)
Q Consensus 177 ~~l~gP~~~G~l~~~~s~~~a~~~i~~~n~~S~~ve~~~l~~Vy~~~p~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 256 (493)
||++||+++|+++++.|+.+++.++++||.+|+++||+++++||+++|+|++|++++++++.+ +.++
T Consensus 161 ckllaPl~vG~l~t~~s~~~~~~~i~~~N~~S~~vEy~~l~~VY~~~P~L~~~~~~~~~~~~~-~~~~------------ 227 (432)
T PF06963_consen 161 CKLLAPLFVGLLMTFASPVIAAIFIAGWNLASVFVEYFLLARVYNSVPALAVKKRSSESESSS-DEES------------ 227 (432)
T ss_pred HHHHHHHHHHHHhhccCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhChHhcCCCCCccccccc-cccc------------
Confidence 999999999999999999999999999999999999999999999999999764444221100 0000
Q ss_pred ccccchhHHHHHHHHHHHHhhhccccccccceeeecccchHHHHHHHHHHHHhhhhhhHHHHHHHHcCCCchHHHHHHHH
Q 011118 257 SHDENNAELAEKRWRWKIIDWISNAPCVGAWQVYLKQEVVLPGVSLALLFFTVLSFGTLMTATLEWEGIPAYIIGIARGI 336 (493)
Q Consensus 257 ~~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~y~~q~v~la~~alalLy~tVL~f~~l~~~yl~~~gls~~~iG~~r~~ 336 (493)
+.++.. ++++.+++.+.+.+ +++||+.|+|||+|+|++++++||||||+||++|++|++++|+|+..+|++||+
T Consensus 228 ~~~~~~----~~~~~~~~~~~~~~--~~~~w~~Y~~q~vflas~alalLY~TVLsf~~lmt~yl~~~G~s~~~igi~R~~ 301 (432)
T PF06963_consen 228 SSESSS----DPSILKRLWNPLRT--IIRGWRTYFRQPVFLASFALALLYFTVLSFGGLMTAYLKSQGYSPSVIGIFRGL 301 (432)
T ss_pred cccccc----hhhHHHHHHHHHHH--HhccHHHHHhCHHHHHHHHHHHHHHHHhcCcHHHHHHHHHCCCCHHHHHHHHHH
Confidence 000000 11122222222222 589999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHhhhchhhhhHHHHHHHHHHHHHHHHHHhhcc---hHHHHHHHHHHHHhhhchhhhhhhhhhhhh
Q 011118 337 SATIGIAATILYPILQSRISTLRTGLWSIWSQWFCLLICVASIWIHN---SLVAAYMLMVGVATSRLGLWMFDLSVIQQM 413 (493)
Q Consensus 337 ~av~GllgT~~~~~l~~riGl~r~g~~~~~~q~~~L~~~v~~~~~~~---~~~s~~~l~~gi~~SR~GLw~fDl~~~~l~ 413 (493)
||++|++||++||+++||+|++|+|+|++++|+.|+.+|+.++|.++ +.++.++|+.|+++||+|||+||++++|++
T Consensus 302 gav~Gl~gT~~~p~l~~riGlvr~G~~~l~~q~~~L~~~v~~~~~~~~~~~~~s~~~l~~gi~~SR~GLW~fDL~~~qi~ 381 (432)
T PF06963_consen 302 GAVFGLLGTWVYPWLMKRIGLVRAGLWSLWWQWVCLALCVVSFWAPGSPFSSISAYLLLGGIALSRIGLWSFDLAVTQIM 381 (432)
T ss_pred HHHHHHHHHHHHHHHHHHhcchhhHHHHHHHHHHHHHHHHHHHhcCCCCchhhHHHHHHHHHHHHHHHHHhhhHHHHHhh
Confidence 99999999999999999999999999999999999999999999866 578999999999999999999999999999
Q ss_pred hccCCCCcchhHHHHHHHHHHhhHHHHHHHHHhccCCCCchHHHHHHHHHH
Q 011118 414 QDLVPESDRCVVGGVQNSLQSTMDLMAYTMGIIISNPQDFWKLILISVIVV 464 (493)
Q Consensus 414 Qe~vp~~~rG~v~gv~~sl~~~f~l~~~~~~ii~~~p~~F~~l~~~S~~~V 464 (493)
||.|||++||+++|+|+|+|++|||++|+++|++|+|++|++++++|+++|
T Consensus 382 Qe~V~~~~Rg~v~gvq~sl~~lf~ll~~~~~ii~~~P~~F~~lv~iS~~~V 432 (432)
T PF06963_consen 382 QENVPESERGAVSGVQNSLQSLFELLSFVLTIIFPRPSQFGWLVLISVAAV 432 (432)
T ss_pred cccCCHHHhhHHHHHHHHHHHHHHHHHHHHHhccCChHhcChHHHhhheeC
Confidence 999999999999999999999999999999999999999999999999875
No 2
>KOG2601 consensus Iron transporter [Inorganic ion transport and metabolism]
Probab=100.00 E-value=2.2e-88 Score=677.63 Aligned_cols=467 Identities=53% Similarity=0.851 Sum_probs=402.6
Q ss_pred cccCCCcchhhHHHHHHHHHHHHHhhHHHHHHHHHHHHHhCCCchHHHHHHHHHHHHHHHhhhccceeeecccchhHHHH
Q 011118 8 VQEQPAITSFLTTYLYVAHFLARWGARMWEFSVGLYMISVWPDSLLFAAIYGAVESASIALFGPIVGHWVDKLTYVKVLQ 87 (493)
Q Consensus 8 ~~~~~~~~~~~~~~L~~s~~lS~~Gdr~~~Fa~~L~lv~l~~~sll~~sv~gl~~~l~~llfg~~vG~~vDr~~R~~v~~ 87 (493)
++.++..+++...+||.+|++++||||||+|++.+|++.++|+|++.+|+||++++.+.+++||.+|.|+|+.+|+|+++
T Consensus 18 ~~~~~~~ls~~~i~Ly~gy~lt~wgdR~W~F~VsL~M~~L~gnsl~lvAvyglvesgs~lvlg~ivGq~vDg~sr~Kvi~ 97 (503)
T KOG2601|consen 18 EGSAEGLLSSTVIFLYLGYFLTTWGDRMWEFSVSLFMILLGGNSLLLVAVYGLVESGSQLVLGPIVGQWVDGMSRVKVIQ 97 (503)
T ss_pred cccccccccceeehhhHHHHHhHhhHhHHHHHHHHHHHHHcCceehhHHHHHHHHHhHHHhhHHHHHHHhcchhHHHHHH
Confidence 33444567778899999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhhcccccchhHHHHHHHHHHHHHHHHHHhhhhhhhhhhccceEEEecCCCChhhhhhhh
Q 011118 88 IWLVTQNLSFIVAGVSVITLLFFSSLKSTNFIAFVLLVILTNISGAVGVISTLAGTILIEREWVVVISEGHPPEALTKMN 167 (493)
Q Consensus 88 ~~~~~q~~~v~~s~~~~~~~l~~~~~~~~~~~~~~~l~~~~~~~g~~~~l~~~a~~iaieRDWvv~i~~~~~~~~L~~~N 167 (493)
.+.+.||++++++.++++.++..++.+....++|..|+++++..+++.++++.|.++.+|||||+++.++++|+.+++||
T Consensus 98 ~~L~lqNlSv~vagglvi~~l~~~~~~~~t~pv~t~~lvLa~~i~aI~~Las~A~~i~i~RDWvvV~s~g~s~s~lt~mn 177 (503)
T KOG2601|consen 98 TWLLLQNLSVIVAGGLVITLLVHKDLKSATSPVFTVCLVLANLIAAIAVLASLAGTILIERDWVVVMSEGESPSVLTNMN 177 (503)
T ss_pred HHHhhccHHHHHHHHHHhhheeecchhcccccHHHHHHHHHHHHHHHHHHHHhhheEEecccEEEEecCCCCHHHHhhcc
Confidence 99999999999998887666654455666777999999999999999999999999999999999998877778999999
Q ss_pred hHHHhHHHHHHhhhhHHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCcchhhhhhhhccCCCcccccccC
Q 011118 168 SIIRRIDLTCKLLAPAITGFIISFVSLQASAMTLAIWTTVTVWVEYWLFMSVYKGIPALAESSQRRIRRSMPIDMEQSTS 247 (493)
Q Consensus 168 a~mrriDl~~~l~gP~~~G~l~~~~s~~~a~~~i~~~n~~S~~ve~~~l~~Vy~~~p~L~~~~~~~~~~~~~~~~~~~~~ 247 (493)
|.+|+||+.+|+++|+..|++++++|.+.++.++++||++|+.+||+++..||+.+|.|+.|+.++..+.+.+..+.- +
T Consensus 178 atir~iDq~tn~Lapv~tg~Iitfvsl~~~~g~f~~w~~vsm~~ey~ll~~vy~g~palavs~~~k~~rs~~~q~~~~-~ 256 (503)
T KOG2601|consen 178 ATIRGIDQSTNLLAPVITGLIITFVSLRASAGTFAAWALVSMWVEYWLLISVYIGVPALAVSKGRKNLRSKESQVELR-D 256 (503)
T ss_pred hhhhhhhhhhhchhhhhhcccceeechhhhhhhhHHHHHHHHHHHHHHHHHHHhCCcHHhhhcchhhhhhhhheeeee-c
Confidence 999999999999999999999999999999999999999999999999999999999999765444333222111110 0
Q ss_pred Ccc--ccccccccccchhHHHHHHHHHHHHhhhccccccccceeeecccchHHHHHHHHHHHHhhhhhhHHHHHHHHcCC
Q 011118 248 MPR--ERESLLSHDENNAELAEKRWRWKIIDWISNAPCVGAWQVYLKQEVVLPGVSLALLFFTVLSFGTLMTATLEWEGI 325 (493)
Q Consensus 248 ~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~y~~q~v~la~~alalLy~tVL~f~~l~~~yl~~~gl 325 (493)
+.. ....+.++.-........+ .-.+..+...++.+++|+.|+.||+++++.+++++|+|+++|+.+|++|+.+.|.
T Consensus 257 ~~~s~~v~~~~s~~~~~~~~~~~~-~~~~l~~~~~~sF~~~w~~y~nq~vvl~g~slallf~tvl~f~~L~t~~~~~~G~ 335 (503)
T KOG2601|consen 257 CQSSFPVAGTHSEGFMTNLASRYG-ILVILPRFSISSFRSAWRVYFNQEVVLPGVSLALLFFTVLGFGVLMTATLFWPGS 335 (503)
T ss_pred CCcccccccccceeeeccccccCc-cccccchhhhHHHHhHHHhhccCeeeehhhHHHHHHHHHHhhheeeeeeeecCCC
Confidence 000 0000000000000000000 0001111222336899999999999999999999999999999999999999999
Q ss_pred CchHHHHHHHHHHHHHHHHHHHHHHHHhhhchhhhhHHHHHHHHHHHHHHHHHHhhcchHHHHHHHHHHHHhhhchhhhh
Q 011118 326 PAYIIGIARGISATIGIAATILYPILQSRISTLRTGLWSIWSQWFCLLICVASIWIHNSLVAAYMLMVGVATSRLGLWMF 405 (493)
Q Consensus 326 s~~~iG~~r~~~av~GllgT~~~~~l~~riGl~r~g~~~~~~q~~~L~~~v~~~~~~~~~~s~~~l~~gi~~SR~GLw~f 405 (493)
|-..+|+.|++++..|+.+|+.+|.+.+|.++.|+|.|+.|.|+. -+..++++|++|++.+|+|||+|
T Consensus 336 p~~i~gi~~g~Sa~tg~~~tv~~~~~~~~~nl~rtg~ws~~sq~s------------v~~isv~ll~agVaaaR~GLW~f 403 (503)
T KOG2601|consen 336 PMYIIGIGRGISAGTGLAATVHYPLMQSRTNLLRTGLWSFWSQDS------------VSKISVYLLFAGVAAARLGLWMF 403 (503)
T ss_pred CceehhhccCcchhhhhhhhhhcccccCccCCCcceehhhccccc------------chhHHHHHHHHHHHHHHhhHHhc
Confidence 999999999999999999999999999999999999999987764 36788999999999999999999
Q ss_pred hhhhhhhhhccCCCCcchhHHHHHHHHHHhhHHHHHHHHHhccCCCCchHHHHHHHHHHHHHHHHHHHHHHHhhcCCCCh
Q 011118 406 DLSVIQQMQDLVPESDRCVVGGVQNSLQSTMDLMAYTMGIIISNPQDFWKLILISVIVVTLAAILYTFHLYRIRKHLFHF 485 (493)
Q Consensus 406 Dl~~~~l~Qe~vp~~~rG~v~gv~~sl~~~f~l~~~~~~ii~~~p~~F~~l~~~S~~~V~~~~~l~~~~~~~~Rghl~h~ 485 (493)
|++++|++||+|||++|+.++|+|+|+|+.+|+++++++|++|.|.+|+.+.++|+.+|..|+.+|.+|+.|.|.|.+|+
T Consensus 404 DlAVtqimQe~VpEseR~vv~gvqnsL~~~ldll~~ilvIi~pnp~~F~iltliS~~fVs~g~m~y~~~l~q~~~~~~hl 483 (503)
T KOG2601|consen 404 DLAVTQIMQETVPESERCVVFGVQNSLNSALDLLKDILVIIVPNPKDFGILTLISFSFVSLGHMFYTFYLAQIRSHNFHL 483 (503)
T ss_pred cHHHHHHHHHhcchhhhhhhHhHHHHHHHHHHHHHHhEEEEecCccceeeeeeehhhHhhhhhhhhhhhhhhccccccch
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hhh
Q 011118 486 DKL 488 (493)
Q Consensus 486 ~~~ 488 (493)
++.
T Consensus 484 ~~~ 486 (503)
T KOG2601|consen 484 EKI 486 (503)
T ss_pred hcC
Confidence 653
No 3
>PF05977 MFS_3: Transmembrane secretion effector; InterPro: IPR010290 This family consists of the enterobactin exporter EntS proteins and putative permeases all belonging to the major facilitator superfamily. EntS exports the siderophore enterobactin out of the cell. The genetic locus entS was changed from ybdA so as to reflect its relevant biological function [].
Probab=100.00 E-value=3.7e-34 Score=310.20 Aligned_cols=387 Identities=16% Similarity=0.146 Sum_probs=289.9
Q ss_pred cchhhHHHHHHHHHHHHHhhHHHHHHHHHHHHHhCCCchHHHHHHHHHHHHHHHhhhccceeeecccchhHHHHHHHHHH
Q 011118 14 ITSFLTTYLYVAHFLARWGARMWEFSVGLYMISVWPDSLLFAAIYGAVESASIALFGPIVGHWVDKLTYVKVLQIWLVTQ 93 (493)
Q Consensus 14 ~~~~~~~~L~~s~~lS~~Gdr~~~Fa~~L~lv~l~~~sll~~sv~gl~~~l~~llfg~~vG~~vDr~~R~~v~~~~~~~q 93 (493)
...|+|+++|.++++|++||.|..+|.+|++.++ ++|...+|+.+.++++|.++|+++.|.++||++|||+|+.+++.+
T Consensus 7 lr~~~Fr~lw~a~~iS~lG~~~~~va~~wlv~~l-t~S~~~valv~~a~~LP~~Llsl~aG~laDr~drrrili~~~~~~ 85 (524)
T PF05977_consen 7 LRNRNFRRLWIAQLISNLGDWMQTVALAWLVTQL-TGSPLMVALVQAASTLPILLLSLFAGALADRFDRRRILILSQLLR 85 (524)
T ss_pred ccCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-hCCHHHHHHHHHHHHHHHHHHHHHHHHHhhcccchHHHHHHHHHH
Confidence 4457999999999999999999999999987766 679999999999999999999999999999999999999999888
Q ss_pred HHHHHHHHHHHHHHHhhcccccchhHHHHHHHHHHHHHHHHHHhhhhhhhhhhccceEEEecCCCChhhhhhhhhHHHhH
Q 011118 94 NLSFIVAGVSVITLLFFSSLKSTNFIAFVLLVILTNISGAVGVISTLAGTILIEREWVVVISEGHPPEALTKMNSIIRRI 173 (493)
Q Consensus 94 ~~~v~~s~~~~~~~l~~~~~~~~~~~~~~~l~~~~~~~g~~~~l~~~a~~iaieRDWvv~i~~~~~~~~L~~~Na~mrri 173 (493)
.+..++.+.+ .... .... +.+++++++.|+.+.+..++.+.. +|.++++ ++|.++|+....+
T Consensus 86 ~~~~~~L~~l---~~~~---~~~~----~~Ll~~~fl~g~~~a~~~PA~~A~-----ip~lV~~---~~L~~A~al~s~~ 147 (524)
T PF05977_consen 86 ALVALLLAVL---AFFG---LLSP----WLLLILTFLLGIGSAFFNPAWQAI-----IPELVPK---EDLPAANALNSIS 147 (524)
T ss_pred HHHHHHHHHH---HHhC---cCCH----HHHHHHHHHHHHHHHHHHHHHHHH-----HHHhccH---hhHHHHHHHHHHH
Confidence 7653322221 1110 1122 233344557799999999998888 8999886 6899999999999
Q ss_pred HHHHHhhhhHHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCcchhhhhhhhccCCCcccccccCCccccc
Q 011118 174 DLTCKLLAPAITGFIISFVSLQASAMTLAIWTTVTVWVEYWLFMSVYKGIPALAESSQRRIRRSMPIDMEQSTSMPRERE 253 (493)
Q Consensus 174 Dl~~~l~gP~~~G~l~~~~s~~~a~~~i~~~n~~S~~ve~~~l~~Vy~~~p~L~~~~~~~~~~~~~~~~~~~~~~~~~~~ 253 (493)
..++.++||.++|.+++.+|...+. ..|++||++...++.++. |+.. +++ .+
T Consensus 148 ~niar~iGPalgG~Lva~~G~~~~f----~inalsfl~~i~~l~~~~---~~~~-----------~~~-~~--------- 199 (524)
T PF05977_consen 148 FNIARIIGPALGGILVAFFGAAAAF----LINALSFLISILALLRWK---PPPP-----------PSS-LP--------- 199 (524)
T ss_pred HHHHHhccchHHHHHHHHHHHHHHH----HHHHHHHHHHHHHHHHcc---cccc-----------ccc-cc---------
Confidence 9999999999999999999965554 889999999877776551 1100 000 00
Q ss_pred cccccccchhHHHHHHHHHHHHhhhccccccccceeeecccchHHHHHHHHHHHHh-hhhhhHHHHHHHH-cCCCchHHH
Q 011118 254 SLLSHDENNAELAEKRWRWKIIDWISNAPCVGAWQVYLKQEVVLPGVSLALLFFTV-LSFGTLMTATLEW-EGIPAYIIG 331 (493)
Q Consensus 254 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~y~~q~v~la~~alalLy~tV-L~f~~l~~~yl~~-~gls~~~iG 331 (493)
+ +++.++ +++|+|+..++|.++..+..+.+++.. -.+..++..|.++ .|.++..+|
T Consensus 200 -------------~----e~~~~~-----l~~G~ryv~~~~~l~~~l~~~~~~~l~~~a~~aLlPl~a~~~l~~~a~~yG 257 (524)
T PF05977_consen 200 -------------R----ERFFSA-----LREGLRYVRSSPPLRSVLLRSFLFNLFASAVWALLPLFARDVLGGGASGYG 257 (524)
T ss_pred -------------h----hhhhhh-----HHHHHHHHhcchHHHHHHHHHHHHHHhhhHHHHhhhHHHHHHhCCcHHHHH
Confidence 0 111222 689999999999999888877776433 3466778888884 899999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhhhchhhhhHHHHHHHHHHHHHHHHHH-hhcchHHHHHHHHHHHHhhhchhhhhhhhhh
Q 011118 332 IARGISATIGIAATILYPILQSRISTLRTGLWSIWSQWFCLLICVASI-WIHNSLVAAYMLMVGVATSRLGLWMFDLSVI 410 (493)
Q Consensus 332 ~~r~~~av~GllgT~~~~~l~~riGl~r~g~~~~~~q~~~L~~~v~~~-~~~~~~~s~~~l~~gi~~SR~GLw~fDl~~~ 410 (493)
++.+..++|+++|+++.+++.+|++..|....+... ...+.+.. +.+..+.. +...++..++.-..+...+
T Consensus 258 ll~a~~gvGai~Gal~~~~l~~~~~~~~lv~~~~~~----~a~~~~~lal~~~~~~~----~~~l~l~G~~~~~~~~~~~ 329 (524)
T PF05977_consen 258 LLLAAFGVGAILGALLLPRLRRRLSSRRLVLLASLL----FALALLLLALSPSFWLA----LIALFLAGAAWIIANSSLN 329 (524)
T ss_pred HHHHHHHHHHHHHHHHHHHhhcccCcchhhHHHHHH----HHHHHHHHhcchHHHHH----HHHHHHHHHHHHHHHHHHH
Confidence 999999999999999999999999877655444321 11111111 12212221 2223333444456678888
Q ss_pred hhhhccCCCCcchhHHHHHHHHHHhh-HHHHHHHHHhccCCCCchHHHHHHHHHHHHHHHHHHHHHHH
Q 011118 411 QQMQDLVPESDRCVVGGVQNSLQSTM-DLMAYTMGIIISNPQDFWKLILISVIVVTLAAILYTFHLYR 477 (493)
Q Consensus 411 ~l~Qe~vp~~~rG~v~gv~~sl~~~f-~l~~~~~~ii~~~p~~F~~l~~~S~~~V~~~~~l~~~~~~~ 477 (493)
.++|+.+|++.|||++++..++.++. ++++++.|.+...-+.-..+.+.+++.+.++.+.+...+++
T Consensus 330 t~~Q~~~P~~~~GRv~si~~~~~~g~~~lGsll~G~la~~~g~~~al~~a~~~lll~~~~~~~~~l~~ 397 (524)
T PF05977_consen 330 TLVQLSVPDWVRGRVFSIYQMVFFGGMPLGSLLWGFLADHFGVRTALLIAGAALLLSALIALRFPLRQ 397 (524)
T ss_pred HHHHHhCCHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHHhcCcc
Confidence 99999999999999999999888887 99999999999887777777665555545444444444443
No 4
>PRK11195 lysophospholipid transporter LplT; Provisional
Probab=99.90 E-value=1.2e-20 Score=197.67 Aligned_cols=385 Identities=15% Similarity=0.038 Sum_probs=246.4
Q ss_pred hhHHHHHHHHHHHHHhhHHHHHHHHHHHHHhCCCchHHHHHHHHHHHHHHHhhhccceeeecccchhHHHHHHHHHHHHH
Q 011118 17 FLTTYLYVAHFLARWGARMWEFSVGLYMISVWPDSLLFAAIYGAVESASIALFGPIVGHWVDKLTYVKVLQIWLVTQNLS 96 (493)
Q Consensus 17 ~~~~~L~~s~~lS~~Gdr~~~Fa~~L~lv~l~~~sll~~sv~gl~~~l~~llfg~~vG~~vDr~~R~~v~~~~~~~q~~~ 96 (493)
|+++.++.+++++..||.+..++.+... .-++.|....+.......++..+++|+.|.+.||++|||++..+++.+.+.
T Consensus 3 ~~f~~l~~~~~~~~~~~~~~~~~~~~~~-~~~~~s~~~~~~~~~~~~l~~~l~~~~~G~laDr~grr~vl~~~~~~~~~~ 81 (393)
T PRK11195 3 KGFYAIMAAQFFSALADNALLFAAIALL-KELHYPDWSQPLLQMFFVLAYIVLAPFVGAFADSFPKGRVMFIANGIKLLG 81 (393)
T ss_pred CcHHHHHHHHHHHHHHHHHHHHHHHHHH-HHcCCcHHHHHHHHHHHHHHHHHHHhhhhHhhhccCCchhhHHHHHHHHHH
Confidence 5899999999999999999999999874 455667778899999999999999999999999999999999999877654
Q ss_pred HHHHHHHHHHHHhhcccccchhHHHHHHHHHHHHHHHHHHhhhhhhhhhhccceEEEecCCCChhhhhhhhhHHHhHHHH
Q 011118 97 FIVAGVSVITLLFFSSLKSTNFIAFVLLVILTNISGAVGVISTLAGTILIEREWVVVISEGHPPEALTKMNSIIRRIDLT 176 (493)
Q Consensus 97 v~~s~~~~~~~l~~~~~~~~~~~~~~~l~~~~~~~g~~~~l~~~a~~iaieRDWvv~i~~~~~~~~L~~~Na~mrriDl~ 176 (493)
.+. + . ... +. .... .+.|..+....++ ..++-+||+ ++ +++.++|+.+......
T Consensus 82 ~~~-~----~-~~~------~~---~~~r---~l~G~~~a~~~pa-~~a~i~~~~----~~---~~~~~a~~~~~~~~~~ 135 (393)
T PRK11195 82 CLL-M----L-FGI------HP---LLAY---GLVGIGAAAYSPA-KYGILTELL----PG---EKLVKANGWMEGSTIA 135 (393)
T ss_pred HHH-H----H-HHH------HH---HHHH---HHHHHHHHHHHHH-HHHHHHHHc----CH---HHHHHHHHHHHHHHHH
Confidence 211 1 1 111 11 1111 2346667777777 444445665 43 6799999999999999
Q ss_pred HHhhhhHHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCcchhhhhhhhccCCCcccccccCCcccccccc
Q 011118 177 CKLLAPAITGFIISFVSLQASAMTLAIWTTVTVWVEYWLFMSVYKGIPALAESSQRRIRRSMPIDMEQSTSMPRERESLL 256 (493)
Q Consensus 177 ~~l~gP~~~G~l~~~~s~~~a~~~i~~~n~~S~~ve~~~l~~Vy~~~p~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 256 (493)
+.++||.++|.+.+.. ..... ..+.+.++...+... ..|+.+++ + + ..+.
T Consensus 136 ~~~~Gp~lgG~l~~~~-~~~~~----~i~~~~~~~~~~~~~----~l~~~~~~---~-----~-~~~~------------ 185 (393)
T PRK11195 136 AILLGTVLGGALADPH-AEAAL----AVCALIYLLAALFNL----FIPRLGAR---R-----P-GQSW------------ 185 (393)
T ss_pred HHHHHHHHHHHHHHHH-HHHHH----HHHHHHHHHHHHHHh----cCCCCccc---c-----c-ccCC------------
Confidence 9999999999998853 32222 455555544433222 34432100 0 0 0000
Q ss_pred ccccchhHHHHHHHHHHHHhhhccccccccceeeecccchHHHHHHHHHH-HHhhhhhhHHHHHHHH-cCCCchHHHHHH
Q 011118 257 SHDENNAELAEKRWRWKIIDWISNAPCVGAWQVYLKQEVVLPGVSLALLF-FTVLSFGTLMTATLEW-EGIPAYIIGIAR 334 (493)
Q Consensus 257 ~~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~y~~q~v~la~~alalLy-~tVL~f~~l~~~yl~~-~gls~~~iG~~r 334 (493)
+ . ++..++ .+++++..+++|.++..+....++ +........+..|+.+ .|+++.+.|.+.
T Consensus 186 ----~-----~----~~~~~~-----~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lg~s~~~~G~~~ 247 (393)
T PRK11195 186 ----N-----P----IALLRD-----FFHACRVLWRDKLGRFSLAGTTLFWGAGATLRFLVLAWAPVALGITLNQPAYLQ 247 (393)
T ss_pred ----C-----H----HHHHHH-----HHHHHHHHHhCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCChhHHHHHH
Confidence 0 0 000111 245566667888877766555333 3323344455667774 899999999999
Q ss_pred HHHHHHHHHHHHHHHHHHhhhchhhhhHHHHHHHHHHHHHHHHHHhhcchHHHHHHHHHHHHhhhchhhhhhhhhhhhhh
Q 011118 335 GISATIGIAATILYPILQSRISTLRTGLWSIWSQWFCLLICVASIWIHNSLVAAYMLMVGVATSRLGLWMFDLSVIQQMQ 414 (493)
Q Consensus 335 ~~~av~GllgT~~~~~l~~riGl~r~g~~~~~~q~~~L~~~v~~~~~~~~~~s~~~l~~gi~~SR~GLw~fDl~~~~l~Q 414 (493)
+..++++++|+++.+++.+|.+..+....+.. .... .....+.+ + .........+..+|...++...++.+|
T Consensus 248 ~~~~~g~i~g~~~~~~l~~~~~~~~~~~~g~~---~~~~-~~~~~~~~-~---~~~~~~~~~~~G~~~g~~~~~~~~~~q 319 (393)
T PRK11195 248 AVVAIGIAVGAGAAARLVTLETVLRVLPAGIL---MGLV-VLLMALQH-S---LLPAYPLLILIGALGGFFVVPMNALLQ 319 (393)
T ss_pred HHHHHHHHHHHHHHHHHhcCCcccchHHHHHH---HHHH-HHHHHHHh-H---HHHHHHHHHHHHHhhhhhhhhHHHHHH
Confidence 99999999999999999998886665443322 1110 11111111 1 122223333445566677888999999
Q ss_pred ccCCCCc-chhHHHHHHHHHHhh-HHHHHHHHHhccCCCCchHHHHHHHHHHHHHHHHHHHHHHHhhcCCCChhh
Q 011118 415 DLVPESD-RCVVGGVQNSLQSTM-DLMAYTMGIIISNPQDFWKLILISVIVVTLAAILYTFHLYRIRKHLFHFDK 487 (493)
Q Consensus 415 e~vp~~~-rG~v~gv~~sl~~~f-~l~~~~~~ii~~~p~~F~~l~~~S~~~V~~~~~l~~~~~~~~Rghl~h~~~ 487 (493)
+..|++. +|++.++.+..+++. .++.-+.+.+ ..-+-....++...+.+ ...++-..| |..|.+.-++|.
T Consensus 320 ~~~~~~~~~g~~~a~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~-~~~~~~~~~-~~~~~~~~~~~~ 391 (393)
T PRK11195 320 HRGHVLVGAGHSIAVQNFNENLAMLLMLGLYSLL-VKLGVPVVAVIVGFGLL-VALAMALLW-RWHRRNQRQFDS 391 (393)
T ss_pred hhCcccccchhHHHHHhHHHHHHHHHHHHHHHHH-HHcCCCHHHHHHHHHHH-HHHHHHHHH-HHHHhccccccC
Confidence 9877765 899999999999999 5555555544 33344444443333333 444444455 333333344443
No 5
>PRK10489 enterobactin exporter EntS; Provisional
Probab=99.88 E-value=1.8e-20 Score=196.61 Aligned_cols=395 Identities=14% Similarity=0.089 Sum_probs=253.6
Q ss_pred CCCCCcccccCCCcchhhHHHHHHHHHHHHHhhHHHHHHHHHHHHHhCCCchHHHHHHHHHHHHHHHhhhccceeeeccc
Q 011118 1 MESEPLIVQEQPAITSFLTTYLYVAHFLARWGARMWEFSVGLYMISVWPDSLLFAAIYGAVESASIALFGPIVGHWVDKL 80 (493)
Q Consensus 1 ~~~~~~~~~~~~~~~~~~~~~L~~s~~lS~~Gdr~~~Fa~~L~lv~l~~~sll~~sv~gl~~~l~~llfg~~vG~~vDr~ 80 (493)
||.|+-...-+.-...|.++.++++++++..|+.+..+++|+++.+.. .+....+.......++.++.++..|.+.||+
T Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~s~~~~g~~~~~~~l~~~~~~~~~G~l~dr~ 79 (417)
T PRK10489 1 MNKQSWLLDLSLLKTHPAFRAVFIARFISIFGLGLLGVAVPVQIQMMT-GSTLQVGLSVTLTGGAMFIGLMVGGVLADRY 79 (417)
T ss_pred CcHHHHHHHHHHHHhCCChhhHHHHHHHHHHHHHHHHHHHHHHHHHHH-CCHHHHHHHHHHHHHHHHHHHHhhHHHhhhc
Confidence 444444322222233468889999999999999999999999877764 5778899999999999999999999999999
Q ss_pred chhHHHHHHHHHHHHHHHHHHHHHHHHHhhcccccchhHHHHHHHHHHHHHHHHHHhhhhhhhhhhccceEEEecCCCCh
Q 011118 81 TYVKVLQIWLVTQNLSFIVAGVSVITLLFFSSLKSTNFIAFVLLVILTNISGAVGVISTLAGTILIEREWVVVISEGHPP 160 (493)
Q Consensus 81 ~R~~v~~~~~~~q~~~v~~s~~~~~~~l~~~~~~~~~~~~~~~l~~~~~~~g~~~~l~~~a~~iaieRDWvv~i~~~~~~ 160 (493)
+|||++..+.+...+........ .. ....++..+ ++...+.|....+..++.+.. ++.++++
T Consensus 80 g~~~~l~~~~~~~~~~~~~~~~~----~~---~~~~~~~~l---~~~~~~~g~~~~~~~~~~~~~-----~~~~~~~--- 141 (417)
T PRK10489 80 DRKKLILLARGTCGLGFIGLALN----AF---LPEPSLLAI---YLLGLWDGFFGSLGVTALLAA-----TPALVGR--- 141 (417)
T ss_pred CCceEEEehHHHHHHHHHHHHHH----HH---cCCCcHHHH---HHHHHHHHHHHHHHHHHHhhh-----hhhccCH---
Confidence 99999888765544432211110 01 011122121 112223344444444443333 3333343
Q ss_pred hhhhhhhhHHHhHHHHHHhhhhHHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCcchhhhhhhhccCCCc
Q 011118 161 EALTKMNSIIRRIDLTCKLLAPAITGFIISFVSLQASAMTLAIWTTVTVWVEYWLFMSVYKGIPALAESSQRRIRRSMPI 240 (493)
Q Consensus 161 ~~L~~~Na~mrriDl~~~l~gP~~~G~l~~~~s~~~a~~~i~~~n~~S~~ve~~~l~~Vy~~~p~L~~~~~~~~~~~~~~ 240 (493)
++..+.|+.......++.++||.++|.+....+.+.... .+.+..++-.+++. +.|+.+++
T Consensus 142 ~~~~~~~~~~~~~~~~g~~~g~~l~g~l~~~~~~~~~~~----~~~~~~~~~~~~~~----~l~~~~~~----------- 202 (417)
T PRK10489 142 ENLMQAGAITMLTVRLGSVISPALGGLLIAAGGVAWNYG----LAAAGTFITLLPLL----RLPALPPP----------- 202 (417)
T ss_pred HHHHHHHHHHHHHHhHHHHhHHHHHHHHHHHHhhHHHHH----HHHHHHHHHHHHHH----hCCCCCCC-----------
Confidence 568899999999999999999999999988777665543 23333333333322 34432100
Q ss_pred ccccccCCccccccccccccchhHHHHHHHHHHHHhhhccccccccceeeecccchHHHHHHHHHHHHhhhhhhHHHHHH
Q 011118 241 DMEQSTSMPRERESLLSHDENNAELAEKRWRWKIIDWISNAPCVGAWQVYLKQEVVLPGVSLALLFFTVLSFGTLMTATL 320 (493)
Q Consensus 241 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~y~~q~v~la~~alalLy~tVL~f~~l~~~yl 320 (493)
+.++ . .. . + + ..++++..+++|.++..+...+.++...++......|+
T Consensus 203 ~~~~----------------~-~~--~----~----~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~ 250 (417)
T PRK10489 203 PQPR----------------E-HP--L----R----S-----LLAGFRFLLASPVVGGIALLGGLLTMASAVRVLYPALA 250 (417)
T ss_pred Cccc----------------c-cc--h----H----H-----HHHHHHHHHcChHHHHHHHHHHHHHHHHhHHHhhHHHH
Confidence 0000 0 00 0 0 0 23455666788877766655544433345566777888
Q ss_pred HH-cCCCchHHHHHHHHHHHHHHHHHHHHHHHHhhhchhhhhHHHHHHHHHHHHHHHHHHhhcchHHHHHHHHHHHHhhh
Q 011118 321 EW-EGIPAYIIGIARGISATIGIAATILYPILQSRISTLRTGLWSIWSQWFCLLICVASIWIHNSLVAAYMLMVGVATSR 399 (493)
Q Consensus 321 ~~-~gls~~~iG~~r~~~av~GllgT~~~~~l~~riGl~r~g~~~~~~q~~~L~~~v~~~~~~~~~~s~~~l~~gi~~SR 399 (493)
++ .|+++...|.+.+..+++++.|+++.+++.+|.+..|....+.. +...+.......++.. ....+.....
T Consensus 251 ~~~~g~~~~~~g~~~~~~~~g~~ig~~~~~~l~~~~~~~~~l~~~~~----~~~~~~~~~~~~~~~~---~~~~~~~~~g 323 (417)
T PRK10489 251 DEVWQMGAAQIGLLYAAVPLGAALGALTSGWLAHSARPGLLMLLSTL----GSFLAVGLFGLMPMWI---LAVLCLALFG 323 (417)
T ss_pred HhccCCChhHhHHHHHHHHHHHHHHHHHHHHhhhccCcchHHHHHHH----HHHHHHHHHHccchHH---HHHHHHHHHH
Confidence 87 89999999999999999999999999999988765555443332 1222222121111211 1222233333
Q ss_pred chhhhhhhhhhhhhhccCCCCcchhHHHHHHHHHHhh-HHHHHHHHHhccCCCCchHHHHHHHHHHHHHHHHHH
Q 011118 400 LGLWMFDLSVIQQMQDLVPESDRCVVGGVQNSLQSTM-DLMAYTMGIIISNPQDFWKLILISVIVVTLAAILYT 472 (493)
Q Consensus 400 ~GLw~fDl~~~~l~Qe~vp~~~rG~v~gv~~sl~~~f-~l~~~~~~ii~~~p~~F~~l~~~S~~~V~~~~~l~~ 472 (493)
+|.-..+.....++|+.+|++.||+++|+.++.+++. .++..+.+.+....+......+...+....+..++.
T Consensus 324 ~~~~~~~~~~~~~~~~~~p~~~~g~~~g~~~~~~~~g~~~g~~l~G~l~~~~g~~~~~~~~~~~~~~~~~~~~~ 397 (417)
T PRK10489 324 YLSAISSLLQYTLLQTQTPDEMLGRINGLWTAQNVTGDAIGAALLGGLGAMMTPVASASASGFGLLIIGVLLLL 397 (417)
T ss_pred HHHHHHHHHHHHHHHhhCCHHHHHHHHHHHHHHHhhhHhHHHHHHHHHHHHhchhhHHHHHHHHHHHHHHHHHH
Confidence 4444556777789999999999999999999988866 899999999988777666666666555555554444
No 6
>PRK06814 acylglycerophosphoethanolamine acyltransferase; Provisional
Probab=99.88 E-value=3.4e-20 Score=218.29 Aligned_cols=364 Identities=12% Similarity=0.071 Sum_probs=240.5
Q ss_pred chhhHHHHHHHHHHHHHhhHHHHHHHHHHHHHhCCCch-----HHHHHHHHHHHHHHHhhhccceeeecccchhHHHHHH
Q 011118 15 TSFLTTYLYVAHFLARWGARMWEFSVGLYMISVWPDSL-----LFAAIYGAVESASIALFGPIVGHWVDKLTYVKVLQIW 89 (493)
Q Consensus 15 ~~~~~~~L~~s~~lS~~Gdr~~~Fa~~L~lv~l~~~sl-----l~~sv~gl~~~l~~llfg~~vG~~vDr~~R~~v~~~~ 89 (493)
..++++++|.++++|.+||.+..++++.++.....++. ...++...+..++.++++|++|.++||++||++++..
T Consensus 9 ~~~~f~~l~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~l~~~l~~~~~G~laDr~~rk~~~~~~ 88 (1140)
T PRK06814 9 KSRRFAPLFWTQFFGAFNDNFLKNALVILILYGLSGALGAYNNALVTLAGAVFILPFFIFSALAGQLADKYDKAKLAKIL 88 (1140)
T ss_pred hccccHHHHHHHHHhHHHHHHHHHHHHHHHHHHhccccccchHHHHHHHHHHHHHHHHHHhhhHHhhhhhccHHHHHHHH
Confidence 45789999999999999999999998876654444443 5678888889999999999999999999999999887
Q ss_pred HHHHHHHHHHHHHHHHHHHhhcccccchhHHHHHHHHHHHHHHHHHHhhhhhhhhhhccceEEEecCCCChhhhhhhhhH
Q 011118 90 LVTQNLSFIVAGVSVITLLFFSSLKSTNFIAFVLLVILTNISGAVGVISTLAGTILIEREWVVVISEGHPPEALTKMNSI 169 (493)
Q Consensus 90 ~~~q~~~v~~s~~~~~~~l~~~~~~~~~~~~~~~l~~~~~~~g~~~~l~~~a~~iaieRDWvv~i~~~~~~~~L~~~Na~ 169 (493)
+.+..+..+++.. . .. . .+ +..+++...+.|..+.++.++.+. +-+||+ .+ +++.++|+.
T Consensus 89 ~~~~~~~~~~~~~---~-~~----~-~s---~~~l~~~~~l~gi~~a~~~p~~~a-~l~~~~----~~---~~~~~a~~~ 148 (1140)
T PRK06814 89 KFAEIGIAALAIY---G-FH----L-NS---VPLLFAALFLMGIHSALFGPIKYS-ILPDHL----NK---DELLGANAL 148 (1140)
T ss_pred HHHHHHHHHHHHH---H-HH----H-hh---HHHHHHHHHHHHHHHHhhchHHHH-hhHhhc----Cc---cccchhhHH
Confidence 7655544322111 1 11 0 11 122333344567888888888444 446665 44 579999999
Q ss_pred HHhHHHHHHhhhhHHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCcchhhhhhhhccCCCcccccccCCc
Q 011118 170 IRRIDLTCKLLAPAITGFIISFVSLQASAMTLAIWTTVTVWVEYWLFMSVYKGIPALAESSQRRIRRSMPIDMEQSTSMP 249 (493)
Q Consensus 170 mrriDl~~~l~gP~~~G~l~~~~s~~~a~~~i~~~n~~S~~ve~~~l~~Vy~~~p~L~~~~~~~~~~~~~~~~~~~~~~~ 249 (493)
+.....++.++||.++|+++...|........ ++..+....+.. .+|+.... + + + ..
T Consensus 149 ~~~~~~ig~~igp~l~g~l~~~~~~~~~~~~~----~~~~~~~~~~~~----~~~~~~~~---~-----~-~-~~----- 205 (1140)
T PRK06814 149 VEAGTFIAILLGTIIGGLATISGNFVILVALL----MGIAVLGWLASL----FIPKTGNA---A-----P-D-LK----- 205 (1140)
T ss_pred HHHHHHHHHHHHHHHHHHHHhccccHHHHHHH----HHHHHHHHHHHh----hCCCCCCC---C-----C-C-Ce-----
Confidence 99999999999999999999988765554211 122222111211 23321100 0 0 0 00
Q ss_pred cccccccccccchhHHHHHHHHHHHHhhhccccccccceeeecccchHHHHHHHHH-HHHhhhhhhHHHHHHHH-cCCCc
Q 011118 250 RERESLLSHDENNAELAEKRWRWKIIDWISNAPCVGAWQVYLKQEVVLPGVSLALL-FFTVLSFGTLMTATLEW-EGIPA 327 (493)
Q Consensus 250 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~y~~q~v~la~~alalL-y~tVL~f~~l~~~yl~~-~gls~ 327 (493)
. . .. ..++ ..+++++..++|.++.......+ ++....+...+..|+++ .|.++
T Consensus 206 ~----------~-~~---------~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~g~~~ 260 (1140)
T PRK06814 206 I----------D-RN---------IIRS-----TITLLKYAKADKRIWLAILGISWFWLVGAVVLSQLPLLAKETLGGDE 260 (1140)
T ss_pred e----------c-cc---------hHHH-----HHHHHHHHhcCchHHHHHHHHHHHHHHHHHHHHHhHHHHHHHcCCch
Confidence 0 0 00 0011 24577777888877766555433 34334566678899986 79999
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHhhhchhhhhHHHHHHHHHHHH-HHHH---------------HHhhcchHHHHHHH
Q 011118 328 YIIGIARGISATIGIAATILYPILQSRISTLRTGLWSIWSQWFCLL-ICVA---------------SIWIHNSLVAAYML 391 (493)
Q Consensus 328 ~~iG~~r~~~av~GllgT~~~~~l~~riGl~r~g~~~~~~q~~~L~-~~v~---------------~~~~~~~~~s~~~l 391 (493)
...|.+.++-++++++|.++.+++.++.+..+...++...-.++.. .+.. .++...+ ...+
T Consensus 261 ~~~g~~~~~~~~g~~ig~~~~g~l~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~ 337 (1140)
T PRK06814 261 NVATLFLAVFSVGVAVGSFLASKLSEGRITLLYVPIGALLMGLFGLDLAFASSSVPAEPAQLKSILVFLSKRH---GWRI 337 (1140)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhCCceeeeeehHHHHHHHHHHHHHHhcccccccccccccchhhhhcccc---cHHH
Confidence 9999999999999999999999999877654433333221111111 1110 0010011 1222
Q ss_pred HHHHHhhhchhhhhhhhhhhhhhccCCCCcchhHHHHHHHHHHhh-HHHHHHHHHhccC
Q 011118 392 MVGVATSRLGLWMFDLSVIQQMQDLVPESDRCVVGGVQNSLQSTM-DLMAYTMGIIISN 449 (493)
Q Consensus 392 ~~gi~~SR~GLw~fDl~~~~l~Qe~vp~~~rG~v~gv~~sl~~~f-~l~~~~~~ii~~~ 449 (493)
..+.++..+|...+......++|+.+|+++|||+.|+.+..++++ .++..+.+.+...
T Consensus 338 ~~~~~~~g~~~~~~~~~~~~~~~~~~p~~~~G~v~g~~~~~~~~~~~ig~~~~g~l~~~ 396 (1140)
T PRK06814 338 LIDLFGLAAAGGLYIVPLFAALQAWANPAHRARVIAANNVLNAAFMVAGTIILALLQAL 396 (1140)
T ss_pred HHHHHHHHHHHHHhHHHHHHHHHhhCCcccceeeeHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 333444456677788899999999999999999999999999987 8888888877643
No 7
>TIGR00900 2A0121 H+ Antiporter protein.
Probab=99.84 E-value=2.5e-18 Score=174.13 Aligned_cols=358 Identities=18% Similarity=0.139 Sum_probs=234.4
Q ss_pred HHHHHHHHHHHHHhhHHHHHHHHHHHHHhCCCchHHHHHHHHHHHHHHHhhhccceeeecccchhHHHHHHHHHHHHHHH
Q 011118 19 TTYLYVAHFLARWGARMWEFSVGLYMISVWPDSLLFAAIYGAVESASIALFGPIVGHWVDKLTYVKVLQIWLVTQNLSFI 98 (493)
Q Consensus 19 ~~~L~~s~~lS~~Gdr~~~Fa~~L~lv~l~~~sll~~sv~gl~~~l~~llfg~~vG~~vDr~~R~~v~~~~~~~q~~~v~ 98 (493)
++.++.+++++.+|+.+...++|+++.+ ...|....++......++.++++++.|.+.||++|||++..+.+...+...
T Consensus 1 ~~~l~~~~~~~~~~~~~~~~~~~~~~~~-~~~s~~~~g~~~~~~~~~~~i~~~~~G~l~dr~g~r~~~~~~~~~~~~~~~ 79 (365)
T TIGR00900 1 FRLLFAAQLISLIGTAITQVALPLYVLA-GTGSASVLSLAALAGMLPYVVLSPIAGALADRYDRKKVMIGADLIRAVLVA 79 (365)
T ss_pred CeehHHHHHHHHHHHHHHHHHHHHHHHH-hhccHHHHHHHHHHHHHHHHHHHHhhhHHHHhhchhHHHHHHHHHHHHHHH
Confidence 3568899999999999999999998876 567888999999999999999999999999999999999888654443311
Q ss_pred HHHHHHHHHHhhcccccchhHHHHHHHHHHHHHHHHHHhhhhhhhhhhccceEEEecCCCChhhhhhhhhHHHhHHHHHH
Q 011118 99 VAGVSVITLLFFSSLKSTNFIAFVLLVILTNISGAVGVISTLAGTILIEREWVVVISEGHPPEALTKMNSIIRRIDLTCK 178 (493)
Q Consensus 99 ~s~~~~~~~l~~~~~~~~~~~~~~~l~~~~~~~g~~~~l~~~a~~iaieRDWvv~i~~~~~~~~L~~~Na~mrriDl~~~ 178 (493)
+ .. ... .....+...+ ++...+.|.......++. .+.-.||. ++ ++..+.|+..+.....+.
T Consensus 80 ~-----~~-~~~-~~~~~~~~~~---~~~~~l~g~~~~~~~~~~-~~~~~~~~----~~---~~~~~~~~~~~~~~~~g~ 141 (365)
T TIGR00900 80 V-----LP-FVA-LLGGLNIWQV---YVLAGILAIAQAFFTPAY-QAMLPDLV----PE---EQLTQANSLSQAVRSLFY 141 (365)
T ss_pred H-----HH-HHH-HcCCCcHHHH---HHHHHHHHHHHHHHHHHH-HHHHHhcC----CH---HHHHHHHhHHHHHHHHHH
Confidence 1 11 111 0011122221 111223455555555553 33344554 33 578999999999999999
Q ss_pred hhhhHHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCcchhhhhhhhccCCCcccccccCCcccccccccc
Q 011118 179 LLAPAITGFIISFVSLQASAMTLAIWTTVTVWVEYWLFMSVYKGIPALAESSQRRIRRSMPIDMEQSTSMPRERESLLSH 258 (493)
Q Consensus 179 l~gP~~~G~l~~~~s~~~a~~~i~~~n~~S~~ve~~~l~~Vy~~~p~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 258 (493)
++||.++|.+.+..|.+.... .+.+..++...++..+ +.|+.+++ +.++ .
T Consensus 142 ~~g~~l~~~l~~~~g~~~~~~----~~~~~~~~~~~~~~~~--~~~~~~~~-----------~~~~-----~-------- 191 (365)
T TIGR00900 142 IVGPGIGGLMYATLGIKWAIW----VDAVGFAISALLIVSV--RIPELAAS-----------EIQA-----L-------- 191 (365)
T ss_pred HHHHHHHHHHHHHhhHHHHHH----HHHHHHHHHHHHHHhc--ccccCCCc-----------cccc-----c--------
Confidence 999999999999888776653 3333333333333322 22321100 0000 0
Q ss_pred ccchhHHHHHHHHHHHHhhhccccccccceeeecccchHHHHHHHHHHHHh-hhhh-hHHHHHHHH-cCCCchHHHHHHH
Q 011118 259 DENNAELAEKRWRWKIIDWISNAPCVGAWQVYLKQEVVLPGVSLALLFFTV-LSFG-TLMTATLEW-EGIPAYIIGIARG 335 (493)
Q Consensus 259 ~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~y~~q~v~la~~alalLy~tV-L~f~-~l~~~yl~~-~gls~~~iG~~r~ 335 (493)
.++.. + + ..++++..+++|.++..+....++... .+.. ..++.|.++ .|.++...|.+.+
T Consensus 192 ----~~~~~----~----~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 254 (365)
T TIGR00900 192 ----SNAVL----R----D-----TREGIKFVLKNPLLRTLLLLALLFNLVFAPAIVALFPYVQSKYLGRGSTHYGWVLA 254 (365)
T ss_pred ----chhHH----H----H-----HHhHHHHHHcCcHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHhCCchHHHHHHHH
Confidence 00000 0 1 234555566788777666666555333 3333 566667775 7999999999999
Q ss_pred HHHHHHHHHHHHHHHHHhhhchhhhhHHHHHHHHHHHHHHHHHHhhcchHHHHHHHHHHHHhhhchhhhhhhhhhhhhhc
Q 011118 336 ISATIGIAATILYPILQSRISTLRTGLWSIWSQWFCLLICVASIWIHNSLVAAYMLMVGVATSRLGLWMFDLSVIQQMQD 415 (493)
Q Consensus 336 ~~av~GllgT~~~~~l~~riGl~r~g~~~~~~q~~~L~~~v~~~~~~~~~~s~~~l~~gi~~SR~GLw~fDl~~~~l~Qe 415 (493)
..++++++++++.+++.||.|..+....+.... ........+.++ +...+....++..+|.-........++|+
T Consensus 255 ~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~---~~~~~~~~~~~~g~~~~~~~~~~~~~~~~ 328 (365)
T TIGR00900 255 AFGLGALLGALLLGLLGRYFKRMALMTGAIFVI---GLAILVVGLTPP---NFPLFLVLWFAIGVGYGPINVPQGTLLQR 328 (365)
T ss_pred HHHHHHHHHHHHHHHHHHHhchhHHHHHHHHHH---HHHHHHHHhhch---hHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 999999999999999999999776655443211 111111122221 12233333444445555668888999999
Q ss_pred cCCCCcchhHHHHHHHHHHhh-HHHHHHHHHhcc
Q 011118 416 LVPESDRCVVGGVQNSLQSTM-DLMAYTMGIIIS 448 (493)
Q Consensus 416 ~vp~~~rG~v~gv~~sl~~~f-~l~~~~~~ii~~ 448 (493)
.+|+++||++.|+.++.+++. .++..+.+.+..
T Consensus 329 ~~~~~~~g~~~~~~~~~~~~~~~~g~~~~g~l~~ 362 (365)
T TIGR00900 329 RVPAELLGRVFGAQFSLSHAAWPLGLILAGPLAD 362 (365)
T ss_pred hCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 999999999999999999988 667777776653
No 8
>PRK08633 2-acyl-glycerophospho-ethanolamine acyltransferase; Validated
Probab=99.76 E-value=1.8e-15 Score=177.96 Aligned_cols=359 Identities=14% Similarity=0.078 Sum_probs=224.9
Q ss_pred cchhhHHHHHHHHHHHHHhhHHHHHHHHHHHHHhCCC--chHHHHHHHHHHHHHHHhhhccceeeecccchhHHHHHHHH
Q 011118 14 ITSFLTTYLYVAHFLARWGARMWEFSVGLYMISVWPD--SLLFAAIYGAVESASIALFGPIVGHWVDKLTYVKVLQIWLV 91 (493)
Q Consensus 14 ~~~~~~~~L~~s~~lS~~Gdr~~~Fa~~L~lv~l~~~--sll~~sv~gl~~~l~~llfg~~vG~~vDr~~R~~v~~~~~~ 91 (493)
...+.|+.++.+++++..+|++...++..++...+.. +....++...+..++.++++++.|.+.||++||+++..+.+
T Consensus 6 ~~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~G~l~Dr~grk~~l~~~~~ 85 (1146)
T PRK08633 6 LKIIGFLPLLLTQFLNAFNDLGHKILIQNTLIKAYDGSEQVILTAIVNALFLLPFLLLSSPAGFLADKFSKNRVIRIVKL 85 (1146)
T ss_pred hhhhhhHHHHHHHHHhHHHHHHHHHHHHHHHHHHcCcccHHHHHHHHHHHHHHHHHHHhhhHhhhcccccHHHHHHHHHH
Confidence 4557899999999999999999988888877665543 44557888888999999999999999999999999998886
Q ss_pred HHHHHHHHHHHHHHHHHhhcccccchhHHHHHHHHHHHHHHHHHHhhhhhhhhhhccceEEEecCCCChhhhhhhhhHHH
Q 011118 92 TQNLSFIVAGVSVITLLFFSSLKSTNFIAFVLLVILTNISGAVGVISTLAGTILIEREWVVVISEGHPPEALTKMNSIIR 171 (493)
Q Consensus 92 ~q~~~v~~s~~~~~~~l~~~~~~~~~~~~~~~l~~~~~~~g~~~~l~~~a~~iaieRDWvv~i~~~~~~~~L~~~Na~mr 171 (493)
+..+..++...+ .. . .+ +..+++...+.|....+..++.. ++-.||+ .+ +++.++|+...
T Consensus 86 ~~~~~~~~~~~~----~~----~-~~---~~~l~~~r~l~G~~~~~~~~~~~-~~i~~~~----~~---~~r~~~~~~~~ 145 (1146)
T PRK08633 86 FEVGLTLLIVLA----YY----L-GW---FWLAFAVTFLLGAQSAIYSPAKY-GIIPELV----GK---ENLSRANGLLE 145 (1146)
T ss_pred HHHHHHHHHHHH----HH----H-cc---HHHHHHHHHHHHHHHHhhchHHH-hhhHHhc----Cc---ccchhhhhHHH
Confidence 665553221111 11 0 11 12222223345666666666643 3344554 33 56899999999
Q ss_pred hHHHHHHhhhhHHHHHHHHh--------hhhHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCcchhhhhhhhccCCCcccc
Q 011118 172 RIDLTCKLLAPAITGFIISF--------VSLQASAMTLAIWTTVTVWVEYWLFMSVYKGIPALAESSQRRIRRSMPIDME 243 (493)
Q Consensus 172 riDl~~~l~gP~~~G~l~~~--------~s~~~a~~~i~~~n~~S~~ve~~~l~~Vy~~~p~L~~~~~~~~~~~~~~~~~ 243 (493)
....++.++||.++|.+... .+......+ .......++-.++.. ..|+..+.++.. + +
T Consensus 146 ~~~~ig~~lg~~l~~~l~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~----~~~~~~~~~~~~-------~-~ 211 (1146)
T PRK08633 146 AFTIVAILAGTALFSFLFESVNGNTPSEILGRIAPAG--LVLLAVAVLGLIFAY----RLPKVPAAAPEV-------F-D 211 (1146)
T ss_pred HHHHHHHHHHHHHHHHHHHhhccccccccccchHHHH--HHHHHHHHHHHHHHh----cCcCCCCCCccc-------c-c
Confidence 99999999999999999875 221111111 111111111111111 234322100000 0 0
Q ss_pred cccCCccccccccccccchhHHHHHHHHHHHHhhhccccccccceeeecccchHHHHHHHHHH-HHhhhhhhHHHHHHH-
Q 011118 244 QSTSMPRERESLLSHDENNAELAEKRWRWKIIDWISNAPCVGAWQVYLKQEVVLPGVSLALLF-FTVLSFGTLMTATLE- 321 (493)
Q Consensus 244 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~y~~q~v~la~~alalLy-~tVL~f~~l~~~yl~- 321 (493)
. +.... . + + ..++++..+++|.++..+....++ +....+...+..|+.
T Consensus 212 ~---------------~~~~~--~----~----~-----~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 261 (1146)
T PRK08633 212 K---------------KKYLF--P----K----L-----LWRNLKLLRSDRVLWLAIIGLSYFWFISQLAQANFPAYAKE 261 (1146)
T ss_pred c---------------ccccc--H----H----H-----HHHHHHHHhcCcHHHHHHHHHHHHHHHHHHHHHhhHHHHHH
Confidence 0 00000 0 0 0 234455566777766555444333 333345556777877
Q ss_pred HcCCCch-HHHHHHHHHHHHHHHHHHHHHHHHhhhchhhhhHHHHHHHHHHHHHHHHH-HhhcchHHHHHHHHHHHHhhh
Q 011118 322 WEGIPAY-IIGIARGISATIGIAATILYPILQSRISTLRTGLWSIWSQWFCLLICVAS-IWIHNSLVAAYMLMVGVATSR 399 (493)
Q Consensus 322 ~~gls~~-~iG~~r~~~av~GllgT~~~~~l~~riGl~r~g~~~~~~q~~~L~~~v~~-~~~~~~~~s~~~l~~gi~~SR 399 (493)
..|+++. ..|++.+..++++++|+++.+++.+|.+..+...++.. +...+.+. .+.+ +...++.+.++..
T Consensus 262 ~~g~s~~~~~g~~~~~~~ig~~~g~~~~g~l~~r~~~~~~~~~~~~----~~~~~~~~~~~~~----~~~~~~~~~~~~g 333 (1146)
T PRK08633 262 VLGLDNTFQVQYLLAASAIGIGIGSLLAGRLSGRHIELGLVPLGAL----GLALSLFLLPTAP----SLASVLVLFFLFG 333 (1146)
T ss_pred HhCCCcHHHHHHHHHHHHHHHHHHHHHHHHHhCCceEccchhHHHH----HHHHHHHHHHHhh----hHHHHHHHHHHHH
Confidence 4899999 99999999999999999999999999986655444432 11111111 1222 2223333344445
Q ss_pred chhhhhhhhhhhhhhccCCCCcchhHHHHHHHHHHhhHHHHHHHH
Q 011118 400 LGLWMFDLSVIQQMQDLVPESDRCVVGGVQNSLQSTMDLMAYTMG 444 (493)
Q Consensus 400 ~GLw~fDl~~~~l~Qe~vp~~~rG~v~gv~~sl~~~f~l~~~~~~ 444 (493)
++.-++......++|+.+|+++||++.|+.+.++++...+...++
T Consensus 334 ~~~~~~~~~~~~~~~~~~p~~~rg~~~~~~~~~~~lg~~~~~~~~ 378 (1146)
T PRK08633 334 FSAGLFIVPLNALIQFRAPEKELGKVLAANNFLQNVGMLLFLALT 378 (1146)
T ss_pred HHHHHhhHHHHHHHhhcCCccchhhhhHHHHHHHHHHHHHHHHHH
Confidence 566666778889999999999999999999999887754433333
No 9
>PRK09874 drug efflux system protein MdtG; Provisional
Probab=99.75 E-value=1.8e-14 Score=149.62 Aligned_cols=362 Identities=13% Similarity=0.029 Sum_probs=211.4
Q ss_pred cccccCCCcchhhHHHHHHHHHHHHHhhHHHHHHHHHHHHHhCC--Cch--HHHHHHHHHHHHHHHhhhccceeeecccc
Q 011118 6 LIVQEQPAITSFLTTYLYVAHFLARWGARMWEFSVGLYMISVWP--DSL--LFAAIYGAVESASIALFGPIVGHWVDKLT 81 (493)
Q Consensus 6 ~~~~~~~~~~~~~~~~L~~s~~lS~~Gdr~~~Fa~~L~lv~l~~--~sl--l~~sv~gl~~~l~~llfg~~vG~~vDr~~ 81 (493)
+.|.|++..-+|.+..+|.+.+++.+++-++...+|.++.+..- ++. ...+.......+...+++|..|.+.||++
T Consensus 3 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~~~~~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g 82 (408)
T PRK09874 3 PCENDTPINWKRNLTVAWLGCFLTGAAFSLVMPFLPLYVEQLGVTGHSALNMWSGLVFSITFLFSAIASPFWGGLADRKG 82 (408)
T ss_pred CCcCCCCCcHHHHHHHHHHHHHHHHHHHHHhhhhHHHHHHHhCCccchhHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhC
Confidence 45667888788899999999999999999999999998877421 111 23466666777888999999999999999
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHHhhcccccchhHHHHHHHHHHHHHHHHHHhhhhhhhhhhccceEEEecCCCChh
Q 011118 82 YVKVLQIWLVTQNLSFIVAGVSVITLLFFSSLKSTNFIAFVLLVILTNISGAVGVISTLAGTILIEREWVVVISEGHPPE 161 (493)
Q Consensus 82 R~~v~~~~~~~q~~~v~~s~~~~~~~l~~~~~~~~~~~~~~~l~~~~~~~g~~~~l~~~a~~iaieRDWvv~i~~~~~~~ 161 (493)
||+++..+.+...+. +.+ .... .++..+.+.. .+.|......... ... -.||. ++ +
T Consensus 83 ~r~~~~~~~~~~~~~----~~~--~~~~------~~~~~~~~~~---~~~g~~~~~~~~~-~~~-~~~~~----~~---~ 138 (408)
T PRK09874 83 RKIMLLRSALGMGIV----MVL--MGLA------QNIWQFLILR---ALLGLLGGFVPNA-NAL-IATQV----PR---N 138 (408)
T ss_pred cHHHHHHHHHHHHHH----HHH--HHHH------hhHHHHHHHH---HHHHHhhhhHHhH-HHH-HHHhc----CH---h
Confidence 999988775433322 111 1111 1222222111 1223333333222 222 23443 22 4
Q ss_pred hhhhhhhHHHhHHHHHHhhhhHHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCcchhhhhhhhccCCCcc
Q 011118 162 ALTKMNSIIRRIDLTCKLLAPAITGFIISFVSLQASAMTLAIWTTVTVWVEYWLFMSVYKGIPALAESSQRRIRRSMPID 241 (493)
Q Consensus 162 ~L~~~Na~mrriDl~~~l~gP~~~G~l~~~~s~~~a~~~i~~~n~~S~~ve~~~l~~Vy~~~p~L~~~~~~~~~~~~~~~ 241 (493)
+..+.|+..........++||.++|.+.+..+.+.+..+..+...+..+.-.. ..|+... +.+
T Consensus 139 ~~~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~----------~~~ 201 (408)
T PRK09874 139 KSGWALGTLSTGGVSGALLGPLAGGLLADSYGLRPVFFITASVLFLCFLVTLF-------CIRENFQ----------PVS 201 (408)
T ss_pred hhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHH-------HhccCcc----------ccc
Confidence 57888999999999999999999999988778766654333333333222111 1121000 000
Q ss_pred cccccCCccccccccccccchhHHHHHHHHHHHHhhhccccccccceeeeccc-chHHHHHHHHHHHHh-hhhhhHHHHH
Q 011118 242 MEQSTSMPRERESLLSHDENNAELAEKRWRWKIIDWISNAPCVGAWQVYLKQE-VVLPGVSLALLFFTV-LSFGTLMTAT 319 (493)
Q Consensus 242 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~y~~q~-v~la~~alalLy~tV-L~f~~l~~~y 319 (493)
.++ ..+ . + +.++ .+++| .++..+...+.+... -.+...+..|
T Consensus 202 ~~~------------------~~~-~----~------------~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 245 (408)
T PRK09874 202 KKE------------------MLH-M----R------------EVVT-SLKNPKLVLSLFVTTLIIQVATGSIAPILTLY 245 (408)
T ss_pred chh------------------hhH-H----H------------HHHH-hCcCCchHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 000 000 0 0 1111 12333 333333333333222 2355667778
Q ss_pred HHHcCCCch----HHHHHHHHHHHHHHHHHHHHHHHHhhhchhhhhHHHHHHHHHHHHHHHHHHhhcchHHHHHHHHHHH
Q 011118 320 LEWEGIPAY----IIGIARGISATIGIAATILYPILQSRISTLRTGLWSIWSQWFCLLICVASIWIHNSLVAAYMLMVGV 395 (493)
Q Consensus 320 l~~~gls~~----~iG~~r~~~av~GllgT~~~~~l~~riGl~r~g~~~~~~q~~~L~~~v~~~~~~~~~~s~~~l~~gi 395 (493)
..+.+.+.. ..|.+.++.+++++++....+++.+|+|..|...++.....+ ..+...+.+. .+.. ....
T Consensus 246 ~~~~~~~~~~~~~~~g~~~~~~~l~~~~~~~~~g~l~dr~g~~~~~~~~~~~~~~---~~~~~~~~~~-~~~~---~~~~ 318 (408)
T PRK09874 246 VRELAGNVSNIAFISGMIASVPGVAALLSAPRLGKLGDRIGPEKILITALIFSVL---LLIPMSFVQT-PLQL---GILR 318 (408)
T ss_pred HHHHhccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccchhHHHHHHHHHH---HHHHHHHhcc-HHHH---HHHH
Confidence 876543333 345666666777888888899999999987776655542211 1111122221 1211 1112
Q ss_pred HhhhchhhhhhhhhhhhhhccCCCCcchhHHHHHHHHHHhh-HHHHHHHHHhccCCC
Q 011118 396 ATSRLGLWMFDLSVIQQMQDLVPESDRCVVGGVQNSLQSTM-DLMAYTMGIIISNPQ 451 (493)
Q Consensus 396 ~~SR~GLw~fDl~~~~l~Qe~vp~~~rG~v~gv~~sl~~~f-~l~~~~~~ii~~~p~ 451 (493)
++..++.-.+-.....++|+..|++++|++.|...+.+++. .++..+.+.+...-+
T Consensus 319 ~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~g~~~gp~~~G~l~~~~g 375 (408)
T PRK09874 319 FLLGAADGALLPAVQTLLVYNSSNQIAGRIFSYNQSFRDIGNVTGPLMGAAISANYG 375 (408)
T ss_pred HHHHhhhHhhHHHHHHHHHHhCCcccceeeehHHHHHHHHHHHhhHHHHHHHHhhcc
Confidence 22223333446667788899999999999999999998877 677777777765433
No 10
>PRK05122 major facilitator superfamily transporter; Provisional
Probab=99.73 E-value=1.8e-14 Score=149.92 Aligned_cols=383 Identities=14% Similarity=0.153 Sum_probs=221.7
Q ss_pred chhhHHHHHHHHHHHHHhhHHHHHHHHHHHHHhCCCchHHHHHHHHHHHHHHHhhhccceeeecccchhHHHHHHHHHHH
Q 011118 15 TSFLTTYLYVAHFLARWGARMWEFSVGLYMISVWPDSLLFAAIYGAVESASIALFGPIVGHWVDKLTYVKVLQIWLVTQN 94 (493)
Q Consensus 15 ~~~~~~~L~~s~~lS~~Gdr~~~Fa~~L~lv~l~~~sll~~sv~gl~~~l~~llfg~~vG~~vDr~~R~~v~~~~~~~q~ 94 (493)
.++++..++++++++..|..|-....|+++.+-++.|....+....+..++..+++++.|.++||++|||++..+++.-.
T Consensus 13 ~~~~~~~l~~~~~~~~~~~~~~~~~l~~~i~~~~g~s~~~~g~~~~~~~~~~~i~~~~~G~l~Dr~g~r~~l~~~~~~~~ 92 (399)
T PRK05122 13 LTLRIVSIVMFTFISYLTIGLPLAVLPGYVHDQLGFSAFLAGLVISLQYLATLLSRPHAGRYADTLGPKKAVVFGLCGCA 92 (399)
T ss_pred ccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCccHHHHHHHHHHHHHHHHHhchhhHhHHhccCCcchHHHHHHHHH
Confidence 44788999999999999999999999998888888889999999999999999999999999999999999999875544
Q ss_pred HHHHHHHHHHHHHHhhcccccchhHHHHHHHHHHHHHHHHHHhhhhhhhhhhccceEEEecCCCChhhhhhhhhHHHhHH
Q 011118 95 LSFIVAGVSVITLLFFSSLKSTNFIAFVLLVILTNISGAVGVISTLAGTILIEREWVVVISEGHPPEALTKMNSIIRRID 174 (493)
Q Consensus 95 ~~v~~s~~~~~~~l~~~~~~~~~~~~~~~l~~~~~~~g~~~~l~~~a~~iaieRDWvv~i~~~~~~~~L~~~Na~mrriD 174 (493)
++ +..... ... . .......+..+++.-.+.|+......++....+ .||+ ++ ++..++++....-.
T Consensus 93 ~~----~~~~~~-~~~-~-~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~~-~~~~----~~---~~r~~~~~~~~~~~ 157 (399)
T PRK05122 93 LS----GLLYLL-AGL-L-AAWPVLSLLLLLLGRLLLGIGESLAGTGSILWG-IGRV----GA---LHTGRVISWNGIAT 157 (399)
T ss_pred HH----HHHHHH-hhh-h-hccchhHHHHHHHHHHHHHhhHHhhcchHHHHH-Hhhc----Ch---hhhccchhhhhhhh
Confidence 43 111011 110 0 110111222233233345666666655543332 3443 33 45678888887778
Q ss_pred HHHHhhhhHHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCcchhhhhhhhccCCCcccccccCCcccccc
Q 011118 175 LTCKLLAPAITGFIISFVSLQASAMTLAIWTTVTVWVEYWLFMSVYKGIPALAESSQRRIRRSMPIDMEQSTSMPRERES 254 (493)
Q Consensus 175 l~~~l~gP~~~G~l~~~~s~~~a~~~i~~~n~~S~~ve~~~l~~Vy~~~p~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 254 (493)
..+.++||.++|.+....|.+....+. .+..++-.++ + ...|+.+ +++ ++
T Consensus 158 ~~g~~~g~~l~~~l~~~~g~~~~~~~~----~~~~~~~~~~---~-~~~~~~~-----------~~~-~~---------- 207 (399)
T PRK05122 158 YGALAIGAPLGVLLYHWGGLAGLGLLI----MLLALLGLLL---A-RPRPAVP-----------PVK-GE---------- 207 (399)
T ss_pred hHHHHHHHHHHHHHHHcccHHHHHHHH----HHHHHHHHHH---H-hcCCCCC-----------CCC-cc----------
Confidence 888999999999999887865433211 1111111111 1 1222110 000 00
Q ss_pred ccccccchhHHHHHHHHHHHHhhhccccccccceeeecccchHHHHHHHHHHHHhhhhhhHHHHHHHHcCCCchHHHHHH
Q 011118 255 LLSHDENNAELAEKRWRWKIIDWISNAPCVGAWQVYLKQEVVLPGVSLALLFFTVLSFGTLMTATLEWEGIPAYIIGIAR 334 (493)
Q Consensus 255 ~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~y~~q~v~la~~alalLy~tVL~f~~l~~~yl~~~gls~~~iG~~r 334 (493)
.++. ++ .++.++... ..+.+..+........+..|.+++|++. .+...
T Consensus 208 ------------~~~~-~~------------~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~ 255 (399)
T PRK05122 208 ------------RLPF-RR------------VLGRVWPYG-----MGLALASIGFGTIATFITLYYAARGWDG--AALAL 255 (399)
T ss_pred ------------chhH-HH------------HHHHHHHHH-----HHHHHHHHHHHHHHHHHHHHHHHccccc--chHHH
Confidence 0000 00 001011111 1111111111123334556777777743 35555
Q ss_pred HHHHHHHHHHHHHHHHHHhhhchhhhhHHHHHHHHHHHHHHHHHHhhcchHHHHHHHHHHHHhhhchhhhhhhhhhhhhh
Q 011118 335 GISATIGIAATILYPILQSRISTLRTGLWSIWSQWFCLLICVASIWIHNSLVAAYMLMVGVATSRLGLWMFDLSVIQQMQ 414 (493)
Q Consensus 335 ~~~av~GllgT~~~~~l~~riGl~r~g~~~~~~q~~~L~~~v~~~~~~~~~~s~~~l~~gi~~SR~GLw~fDl~~~~l~Q 414 (493)
+.-.++++.+.+..+++.+|+|..|....+... ...+........+.+. +..+.++..+|.-..........+
T Consensus 256 ~~~~~~~~~~~~~~g~l~~r~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~---~~~~~~l~G~~~~~~~~~~~~~~~ 328 (399)
T PRK05122 256 TLFGVAFVGARLLFGNLINRLGGLRVAIVSLLV----EILGLLLLWLAPSPWM---ALIGAALTGFGFSLVFPALGVEAV 328 (399)
T ss_pred HHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHH----HHHHHHHHHHhccHHH---HHHHHHHHHHhHHHHHHHHHHHHH
Confidence 666778889999999999999987766555432 2222221111112111 122223333333334455556777
Q ss_pred ccCCCCcchhHHHHHHHHHHhh-HHHHHHHHHhccCCCCchHHHHHHHHHHHHHHHHHHHHHHHhhcCCC
Q 011118 415 DLVPESDRCVVGGVQNSLQSTM-DLMAYTMGIIISNPQDFWKLILISVIVVTLAAILYTFHLYRIRKHLF 483 (493)
Q Consensus 415 e~vp~~~rG~v~gv~~sl~~~f-~l~~~~~~ii~~~p~~F~~l~~~S~~~V~~~~~l~~~~~~~~Rghl~ 483 (493)
+.+|+++||++.|+.++.+++. .++..+.+.+...-+ +........+.... +.+...+.++.++|.+
T Consensus 329 ~~~~~~~~g~~~g~~~~~~~~g~~~~~~~~g~l~~~~g-~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~ 396 (399)
T PRK05122 329 KRVPPQNRGAALGAYSVFLDLSLGITGPLAGLVASWFG-YPSIFLAAALAALL-GLALTWLLYRRAPRAV 396 (399)
T ss_pred HhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcC-HHHHHHHHHHHHHH-HHHHHHHhcccccccC
Confidence 8899999999999999888877 677788887765544 33333333222222 3344445566777765
No 11
>PRK11646 multidrug resistance protein MdtH; Provisional
Probab=99.72 E-value=1.8e-14 Score=151.37 Aligned_cols=354 Identities=10% Similarity=0.058 Sum_probs=218.6
Q ss_pred cccCCCcchhhHHHHHHHHHHHHHhhHHHHHHHHHHHHHhCCCchHHHHHHHHHHHHHHHhhhccceeeecccchhHHHH
Q 011118 8 VQEQPAITSFLTTYLYVAHFLARWGARMWEFSVGLYMISVWPDSLLFAAIYGAVESASIALFGPIVGHWVDKLTYVKVLQ 87 (493)
Q Consensus 8 ~~~~~~~~~~~~~~L~~s~~lS~~Gdr~~~Fa~~L~lv~l~~~sll~~sv~gl~~~l~~llfg~~vG~~vDr~~R~~v~~ 87 (493)
..|..++|+ ..++.+.++...|--+---..|.++....+-|...++.......++.+++++..|.+.||++||+++.
T Consensus 4 ~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~gl~~~~~~l~~~~~~~~~G~l~dr~g~k~~l~ 80 (400)
T PRK11646 4 VSQARNLGK---YFLLIDNMLVVLGFFVVFPLISIRFVDQLGWAAVMVGIALGLRQFIQQGLGIFGGAIADRFGAKPMIV 80 (400)
T ss_pred CcccccccH---HHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCcHHHHHHHHHHHHHHHHHHHhhhhHHHHHhCchHHHH
Confidence 455666666 66778888999998887777788888888889999999999889999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhhcccccchhHHHHHHHHHHHHHHHHHHhhhhhhhhhhccceEEEecCCCChhhhhhhh
Q 011118 88 IWLVTQNLSFIVAGVSVITLLFFSSLKSTNFIAFVLLVILTNISGAVGVISTLAGTILIEREWVVVISEGHPPEALTKMN 167 (493)
Q Consensus 88 ~~~~~q~~~v~~s~~~~~~~l~~~~~~~~~~~~~~~l~~~~~~~g~~~~l~~~a~~iaieRDWvv~i~~~~~~~~L~~~N 167 (493)
.+++...+... .+.. ....|..+ +...+.|+...++.++.+.. -.||+ ++ +++.+.+
T Consensus 81 ~~~~~~~~~~~-------~~~~----~~~~~~l~----~~~~l~g~~~~~~~~~~~~~-~~~~~----~~---~~~~~a~ 137 (400)
T PRK11646 81 TGMLMRAAGFA-------TMAI----AHEPWLLW----LSCILSGLGGTLFDPPRTAL-VIKLI----RP---HQRGRFF 137 (400)
T ss_pred HHHHHHHHHHH-------HHHH----hccHHHHH----HHHHHHHHHHHHHHHHHHHH-HHHhc----CH---HHHHHHH
Confidence 88865555421 1111 11112111 11223455555555553333 23443 32 6789999
Q ss_pred hHHHhHHHHHHhhhhHHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCcchhhhhhhhccCCCcccccccC
Q 011118 168 SIIRRIDLTCKLLAPAITGFIISFVSLQASAMTLAIWTTVTVWVEYWLFMSVYKGIPALAESSQRRIRRSMPIDMEQSTS 247 (493)
Q Consensus 168 a~mrriDl~~~l~gP~~~G~l~~~~s~~~a~~~i~~~n~~S~~ve~~~l~~Vy~~~p~L~~~~~~~~~~~~~~~~~~~~~ 247 (493)
+..+..+..+..+||.++|.+. ..|.+....+ +++..++..++.... .|+..+ + + .+
T Consensus 138 ~~~~~~~~~g~~ig~~l~g~l~-~~g~~~~f~~----~~~~~~~~~i~~~~~---~~~~~~----~-----~---~~--- 194 (400)
T PRK11646 138 SLLMMQDSAGAVIGALLGSWLL-QYDFRLVCAT----GAVLFVLAAAFNAWL---LPAYKL----S-----T---VR--- 194 (400)
T ss_pred HHHHHHHHHHHHHHHHHHHHHH-HhhHHHHHHH----HHHHHHHHHHHHHHh---CCcccc----c-----c---cc---
Confidence 9999999999999999999998 4676655433 333333332222211 232110 0 0 00
Q ss_pred CccccccccccccchhHHHHHHHHHHHHhhhccccccccceeeecccchHHHHHHHHHH-HHhhhhhhHHHHHHHHcCCC
Q 011118 248 MPRERESLLSHDENNAELAEKRWRWKIIDWISNAPCVGAWQVYLKQEVVLPGVSLALLF-FTVLSFGTLMTATLEWEGIP 326 (493)
Q Consensus 248 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~y~~q~v~la~~alalLy-~tVL~f~~l~~~yl~~~gls 326 (493)
. + ..++++..+++|.++........+ +........+..|+++.+.+
T Consensus 195 ----------------~--~---------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~ 241 (400)
T PRK11646 195 ----------------T--P---------------VREGMTRVLRDKRFVTYVLTLTGYYMLAVQVMLMLPIMVNDIAGS 241 (400)
T ss_pred ----------------h--h---------------hHHHHHHHHcCchHHHHHHHHHHHHHHHHHHHHhhhhhHHhhcCC
Confidence 0 0 123344445666555433332222 22223334566788877678
Q ss_pred chHHHHHHHHHHHHHHHHH-HHHHHHHhhhchhhhhHHHHHHHHHHHHHHHHHH-hhcchHHHHHHHHHHHHhhhchhhh
Q 011118 327 AYIIGIARGISATIGIAAT-ILYPILQSRISTLRTGLWSIWSQWFCLLICVASI-WIHNSLVAAYMLMVGVATSRLGLWM 404 (493)
Q Consensus 327 ~~~iG~~r~~~av~GllgT-~~~~~l~~riGl~r~g~~~~~~q~~~L~~~v~~~-~~~~~~~s~~~l~~gi~~SR~GLw~ 404 (493)
+..+|.+.++.++.++.+. .+.++..||.+..|....+.. ....+.... +.+ ... .+....++..+|.-.
T Consensus 242 ~~~~g~l~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~----~~~~~~~~l~~~~-~~~---~~~~~~~l~~~g~~~ 313 (400)
T PRK11646 242 PSAVKWMYAIEACLSLTLLYPIARWSEKRFRLEHRLMAGLL----IMSLSMFPIGMVS-NLQ---QLFTLICLFYIGSII 313 (400)
T ss_pred chHHHHHHHHHHHHHHHHHHHHHHHHHHhcchhHHHHHHHH----HHHHHHHHHHHhh-hHH---HHHHHHHHHHHHHHH
Confidence 8999999888777776544 444555566765554333322 111111111 122 111 111222233345556
Q ss_pred hhhhhhhhhhccCCCCcchhHHHHHHHHHHhh-HHHHHHHHHhccCCC
Q 011118 405 FDLSVIQQMQDLVPESDRCVVGGVQNSLQSTM-DLMAYTMGIIISNPQ 451 (493)
Q Consensus 405 fDl~~~~l~Qe~vp~~~rG~v~gv~~sl~~~f-~l~~~~~~ii~~~p~ 451 (493)
.+.....+.|+.+|+++||++.|..+...+.. .++..+.|.+....+
T Consensus 314 ~~p~~~~~~~~~~p~~~~g~~~g~~~~~~~~g~~ig~~l~G~l~~~~~ 361 (400)
T PRK11646 314 AEPARETLSASLADARARGSYMGFSRLGLALGGAIGYIGGGWLFDLGK 361 (400)
T ss_pred HHccHHHHHHhcCCcccchhhhhHHHHHHHHHHHhcccchHHHHHHHh
Confidence 67788899999999999999999999888777 788888888877653
No 12
>PF07690 MFS_1: Major Facilitator Superfamily; InterPro: IPR011701 Among the different families of transporter, only two occur ubiquitously in all classifications of organisms. These are the ATP-Binding Cassette (ABC) superfamily and the Major Facilitator Superfamily (MFS). The MFS transporters are single-polypeptide secondary carriers capable only of transporting small solutes in response to chemiosmotic ion gradients [, ].; GO: 0055085 transmembrane transport, 0016021 integral to membrane; PDB: 2GFP_B 3O7P_A 3O7Q_A 1PW4_A.
Probab=99.72 E-value=9.4e-16 Score=154.71 Aligned_cols=345 Identities=20% Similarity=0.235 Sum_probs=221.6
Q ss_pred HHHHHHHHHHhhHHHHHHHHHHHHHhCCCchHHHHHHHHHHHHHHHhhhccceeeecccchhHHHHHHHHHHHHHHHHHH
Q 011118 22 LYVAHFLARWGARMWEFSVGLYMISVWPDSLLFAAIYGAVESASIALFGPIVGHWVDKLTYVKVLQIWLVTQNLSFIVAG 101 (493)
Q Consensus 22 L~~s~~lS~~Gdr~~~Fa~~L~lv~l~~~sll~~sv~gl~~~l~~llfg~~vG~~vDr~~R~~v~~~~~~~q~~~v~~s~ 101 (493)
|+.+.+++..++.+...+.|..+.+-++-|....+.......++..+++++.|.+.||++|||++..+.+...+. .+
T Consensus 1 L~l~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~r~~l~~~~~~~~~~-~~-- 77 (352)
T PF07690_consen 1 LFLAFFLSGFGFSIISPALPLYLAEELGLSPSQIGLLFSAFFLGSALFSPFAGYLSDRFGRRRVLIIGLLLFALG-SL-- 77 (352)
T ss_dssp HHHHHHHHHHHHHHHHHHHH-HHHCCSTTTSHCHHHHHHHHHHHHHHHHHHHHHHHHHS-HHHHHHHHHHHHHHH-HH--
T ss_pred CcHHHHHHHHHHHHHHHHHHHHHHHccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCeeeEeehhhhhhhH-HH--
Confidence 578899999999999999997667777778888999999999999999999999999999999998887665555 11
Q ss_pred HHHHHHHhhcccccchhHHHHHHHHHHHHHHHHHHhhhhhhhhhhccceEEEecCCCChhhhhhhhhHHHhHHHHHHhhh
Q 011118 102 VSVITLLFFSSLKSTNFIAFVLLVILTNISGAVGVISTLAGTILIEREWVVVISEGHPPEALTKMNSIIRRIDLTCKLLA 181 (493)
Q Consensus 102 ~~~~~~l~~~~~~~~~~~~~~~l~~~~~~~g~~~~l~~~a~~iaieRDWvv~i~~~~~~~~L~~~Na~mrriDl~~~l~g 181 (493)
+. .+ ....+ .+. +...+.|.......++.. ++-.||. ++ ++..+.|+.+......+.++|
T Consensus 78 ---~~-~~----~~~~~-~~~---~~~~l~g~~~~~~~~~~~-~~i~~~~----~~---~~~~~~~~~~~~~~~~g~~~g 137 (352)
T PF07690_consen 78 ---LL-AF----ASNFW-LLL---IARFLLGIGSGFFSPASN-ALIADWF----PP---EERGRAFGILSAGFSLGSILG 137 (352)
T ss_dssp ---HH-HH----HCCHH-HHH---HHHHHHHHHHHHHHHHHH-HHHHHCC----CT---CCHHHHHHHHHHHHHHHHHHH
T ss_pred ---Hh-hh----hhhHH-HHh---hhcccccccccccccccc-ccccccc----hh---hhhhhccccccchhhhhhhcc
Confidence 11 11 01222 222 122244556566665533 3345665 33 468999999999999999999
Q ss_pred hHHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCcchhhhhhhhccCCCcccccccCCccccccccccccc
Q 011118 182 PAITGFIISFVSLQASAMTLAIWTTVTVWVEYWLFMSVYKGIPALAESSQRRIRRSMPIDMEQSTSMPRERESLLSHDEN 261 (493)
Q Consensus 182 P~~~G~l~~~~s~~~a~~~i~~~n~~S~~ve~~~l~~Vy~~~p~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 261 (493)
|.++|.+.+..|.+....+.++...++.+.-.. ..|+.+.+++++ ++ . +.
T Consensus 138 ~~l~~~l~~~~~~~~~~~~~~~~~~~~~il~~~-------~~~~~~~~~~~~---------~~-----~---------~~ 187 (352)
T PF07690_consen 138 PLLGGFLISYFGWRWAFLISAILSLIAAILFIL-------FLPEPPPPRERE---------SP-----K---------ES 187 (352)
T ss_dssp HHHHHHCCCHCHHCCHHHHHHHHHHHHHHHHHC-------CC---STTTT-----------SS-----T---------TT
T ss_pred cchhhhhhhccccccccccccchhhhhhhhHhh-------hhhhcccccccc---------cc-----c---------cc
Confidence 999999998777666654444444444331111 112111000000 00 0 00
Q ss_pred hhHHHHHHHHHHHHhhhccccccccceeeecccchHHHHHHHHHH-HHhhhhhhHHHHHHH-HcCCC-chHHHHHHHHHH
Q 011118 262 NAELAEKRWRWKIIDWISNAPCVGAWQVYLKQEVVLPGVSLALLF-FTVLSFGTLMTATLE-WEGIP-AYIIGIARGISA 338 (493)
Q Consensus 262 ~~~~~~~~~~~~~~~~l~~~~~~~g~~~y~~q~v~la~~alalLy-~tVL~f~~l~~~yl~-~~gls-~~~iG~~r~~~a 338 (493)
.... . ++ ..++|+...++|.++..+...+++ +..-.+...+..|+. ..|++ +...|.+.++..
T Consensus 188 ~~~~-~--------~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~ 253 (352)
T PF07690_consen 188 ESKK-P--------KP-----LKPGFKSLFKNPVLWILLIAFFLFFFVFSGFSFFLPLYLQEVLGFSGPSQAGLLFSIFG 253 (352)
T ss_dssp T--H-H--------HC-----CCH-CTHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHCCTHHHHHHHHHHHH
T ss_pred cccc-c--------cc-----cccccccccccchhhhhhhhhhHHHHHHHHhhcccchhhhhccCCCHHHHHHHHHHHHH
Confidence 0000 0 01 345678888888776333333333 233456777788855 68999 899999999999
Q ss_pred HHHHHHHHHHHHHHhhhchhhhhHHHHHHHHHHHHHHHHHHhhcchHHHHHHHHHHHHhhhchhhhhhhhhhhhhhccCC
Q 011118 339 TIGIAATILYPILQSRISTLRTGLWSIWSQWFCLLICVASIWIHNSLVAAYMLMVGVATSRLGLWMFDLSVIQQMQDLVP 418 (493)
Q Consensus 339 v~GllgT~~~~~l~~riGl~r~g~~~~~~q~~~L~~~v~~~~~~~~~~s~~~l~~gi~~SR~GLw~fDl~~~~l~Qe~vp 418 (493)
+.++.+.++.+++.+|+|..+...+... +...+...........+........++..++.-..+.....+.|+.+|
T Consensus 254 ~~~~~~~~~~~~l~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~ 329 (352)
T PF07690_consen 254 IVGIIGSLLAGRLSDRFGRRRRLLIAIL----LLILGALGLLLLPFSSSPVWLIIALFLIGFGFGIVFPILFSLIQELVP 329 (352)
T ss_dssp HHHHHHHHHHHHHHHHTTCHHHHHHHHH----HHHHHHHHHCCSHHHCHHHHHHHHHHHHHHHHHHHCHHHHHHHHCCCH
T ss_pred HHHHHHHHHHHHHHHHcCcHHHHHHHHH----HHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCC
Confidence 9999999999999999997666554443 222222222111111111222223333445555669999999999999
Q ss_pred CCcchhHHHHHHHHHHhhH
Q 011118 419 ESDRCVVGGVQNSLQSTMD 437 (493)
Q Consensus 419 ~~~rG~v~gv~~sl~~~f~ 437 (493)
+++||++.|+.++.+++..
T Consensus 330 ~~~~g~~~g~~~~~~~~~~ 348 (352)
T PF07690_consen 330 PEYRGTAFGLFNSIGSLGG 348 (352)
T ss_dssp TCHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHH
Confidence 9999999999999888764
No 13
>PRK12382 putative transporter; Provisional
Probab=99.68 E-value=1.8e-13 Score=142.25 Aligned_cols=359 Identities=14% Similarity=0.089 Sum_probs=209.5
Q ss_pred ccCCCcchhhHHHHHHHHHHHHHhhHHHHHHHHHHHHHhCCCchHHHHHHHHHHHHHHHhhhccceeeecccchhHHHHH
Q 011118 9 QEQPAITSFLTTYLYVAHFLARWGARMWEFSVGLYMISVWPDSLLFAAIYGAVESASIALFGPIVGHWVDKLTYVKVLQI 88 (493)
Q Consensus 9 ~~~~~~~~~~~~~L~~s~~lS~~Gdr~~~Fa~~L~lv~l~~~sll~~sv~gl~~~l~~llfg~~vG~~vDr~~R~~v~~~ 88 (493)
.|+++.-++.+..++.+++++..+..+..=.+|+++.+-++-|....++......++..+++|+.|.++||++|||++..
T Consensus 7 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~l~~~l~~~lg~s~~~~g~~~s~~~~~~~i~~~~~G~l~Dr~g~r~~l~~ 86 (392)
T PRK12382 7 TETRSSANFSLFRIAFAVFLTYMTVGLPLPVIPLFVHHDLGFGNTMVGIAVGIQFLATVLTRGYAGRLADQYGAKRSALQ 86 (392)
T ss_pred CcCCCcccccHHHHHHHHHHHHHHHHHHhhhhhHHHHHhcCCcHHHHHHHHHHHHHHHHHHhhhhhHHHHhhcchHHHHH
Confidence 45566666788889999999999988887778877777777788999999999999999999999999999999999988
Q ss_pred HHHHHHHHHHHHHHHHHHHHhhcccccchhHHHHHHHHHHHHHHHHHHhhhhhhhhhhccceEEEecCCCChhhhhhhhh
Q 011118 89 WLVTQNLSFIVAGVSVITLLFFSSLKSTNFIAFVLLVILTNISGAVGVISTLAGTILIEREWVVVISEGHPPEALTKMNS 168 (493)
Q Consensus 89 ~~~~q~~~v~~s~~~~~~~l~~~~~~~~~~~~~~~l~~~~~~~g~~~~l~~~a~~iaieRDWvv~i~~~~~~~~L~~~Na 168 (493)
+.+...++ +......... .......+..+++.-.+.|+......++.. +.-.||+ ++ ++..+.++
T Consensus 87 ~~~~~~~~----~~~~~~~~~~---~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~-~~~~~~~----~~---~~r~~a~~ 151 (392)
T PRK12382 87 GMLACGLA----GLAYLLAAIL---PVSAPFKFALLVVGRLILGFGESQLLTGAL-TWGLGLV----GP---KHSGKVMS 151 (392)
T ss_pred HHHHHHHH----HHHHHhhhcc---ccchhHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHhhC----Cc---cccchhhh
Confidence 87543322 1110110100 000111222222222344555554444432 2223444 33 45788888
Q ss_pred HHHhHHHHHHhhhhHHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCcchhhhhhhhccCCCcccccccCC
Q 011118 169 IIRRIDLTCKLLAPAITGFIISFVSLQASAMTLAIWTTVTVWVEYWLFMSVYKGIPALAESSQRRIRRSMPIDMEQSTSM 248 (493)
Q Consensus 169 ~mrriDl~~~l~gP~~~G~l~~~~s~~~a~~~i~~~n~~S~~ve~~~l~~Vy~~~p~L~~~~~~~~~~~~~~~~~~~~~~ 248 (493)
.+......+.++||.++|.+....|..... ....+..+...++ +.+.|+.+ ++ ++
T Consensus 152 ~~~~~~~~g~~~g~~~~~~l~~~~g~~~~~----~~~~~~~~~~~~~----~~~~~~~~-----------~~--~~---- 206 (392)
T PRK12382 152 WNGMAMYGALAAGAPLGLLLHSHFGFAALA----LTTMVLPLLAWAF----NGTVRKVP-----------AH--AG---- 206 (392)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhccChHHHH----HHHHHHHHHHHHH----HHhccCCC-----------CC--cc----
Confidence 888888889999999999998877765322 2222222211111 12233211 00 00
Q ss_pred ccccccccccccchhHHHHHHHHHHHHhhhccccccccceeeecccchHHHHHHHHHHHHhhhhhhHHHHHHHHcCCCch
Q 011118 249 PRERESLLSHDENNAELAEKRWRWKIIDWISNAPCVGAWQVYLKQEVVLPGVSLALLFFTVLSFGTLMTATLEWEGIPAY 328 (493)
Q Consensus 249 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~y~~q~v~la~~alalLy~tVL~f~~l~~~yl~~~gls~~ 328 (493)
+ .. + . ++ .++..++ ..+...+..+...........|+.+.|.++.
T Consensus 207 -~----------~~-~--~----~~------------~~~~~~~-----~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~ 251 (392)
T PRK12382 207 -E----------RP-S--L----WS------------VVGLIWK-----PGLGLALQGVGFAVIGTFVSLYFASKGWAMA 251 (392)
T ss_pred -c----------Cc-h--H----HH------------HHHHHHH-----hHHHHHHHHHHHhHHHHHHHHHHHhcCCchh
Confidence 0 00 0 0 00 0111111 1111111111111223344567777777654
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhhhchhhhhHHHHHHHHHHHHHHHHHHhhcchHHHHHHHHHHHHhhhchhhhhhhh
Q 011118 329 IIGIARGISATIGIAATILYPILQSRISTLRTGLWSIWSQWFCLLICVASIWIHNSLVAAYMLMVGVATSRLGLWMFDLS 408 (493)
Q Consensus 329 ~iG~~r~~~av~GllgT~~~~~l~~riGl~r~g~~~~~~q~~~L~~~v~~~~~~~~~~s~~~l~~gi~~SR~GLw~fDl~ 408 (493)
|......+++++.+.+..+++.+|+|..|...++.....+.. +.....+.. + .+..+.++..+|.-.....
T Consensus 252 --~~~~~~~~~~~~~~~~~~g~l~~r~g~~~~~~~~~~~~~~~~---~~~~~~~~~-~---~~~~~~~l~g~~~~~~~~~ 322 (392)
T PRK12382 252 --GFTLTAFGGAFVLMRVLFGWMPDRFGGVKVAIVSLLVETVGL---LLLWLAPTA-W---VALAGAALTGAGCSLIFPA 322 (392)
T ss_pred --HHHHHHHHHHHHHHHHHHHHHHHhcCCCeehHHHHHHHHHHH---HHHHHcccH-H---HHHHHHHHHHHHHHhHHHH
Confidence 445556677788999999999999998887766554322211 111122221 1 1112222222333333445
Q ss_pred hhhhhhccCCCCcchhHHHHHHHHHHhh-HHHHHHHHHhccCCC
Q 011118 409 VIQQMQDLVPESDRCVVGGVQNSLQSTM-DLMAYTMGIIISNPQ 451 (493)
Q Consensus 409 ~~~l~Qe~vp~~~rG~v~gv~~sl~~~f-~l~~~~~~ii~~~p~ 451 (493)
.....++..|+++||+.+|+.++..++. .++..+.+.+.+.-+
T Consensus 323 ~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~ig~~~~g~l~~~~g 366 (392)
T PRK12382 323 LGVEVVKRVPSQVRGTALGGYAAFQDIAYGVSGPLAGMLATSFG 366 (392)
T ss_pred HHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhC
Confidence 6667788899999999999999988877 788888888876544
No 14
>PRK12307 putative sialic acid transporter; Provisional
Probab=99.66 E-value=2.3e-13 Score=142.73 Aligned_cols=369 Identities=11% Similarity=0.044 Sum_probs=216.4
Q ss_pred cCCCcchhhHHHHHHHHHHHHHhhHHHHHHHHHHHHHhCCCchHHHHHHHHHHHHHHHhhhccceeeecccchhHHHHHH
Q 011118 10 EQPAITSFLTTYLYVAHFLARWGARMWEFSVGLYMISVWPDSLLFAAIYGAVESASIALFGPIVGHWVDKLTYVKVLQIW 89 (493)
Q Consensus 10 ~~~~~~~~~~~~L~~s~~lS~~Gdr~~~Fa~~L~lv~l~~~sll~~sv~gl~~~l~~llfg~~vG~~vDr~~R~~v~~~~ 89 (493)
|.+..+.+.+...+.+.++...+.-+..++.|.+. +-++-|....+.......++.++.+++.|.+.||++||+++..+
T Consensus 11 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~-~~~~~s~~~~~~~~~~~~~~~~l~~~~~g~l~dr~g~r~~l~~~ 89 (426)
T PRK12307 11 EITRPQKNALFSAWLGYVFDGFDFMLIFYIMYLIK-ADLGLTDMEGAFLATAAFIGRPFGGALFGLLADKFGRKPLMMWS 89 (426)
T ss_pred cCCHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHH-HHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCChHHHHHH
Confidence 33444456677888999998888888888888855 44555777888888889999999999999999999999999888
Q ss_pred HHHHHHHHHHHHHHHHHHHhhcccccchhHHHHHHHHHHHHHHHHHHhhhhhhhhhhccceEEEecCCCChhhhhhhhhH
Q 011118 90 LVTQNLSFIVAGVSVITLLFFSSLKSTNFIAFVLLVILTNISGAVGVISTLAGTILIEREWVVVISEGHPPEALTKMNSI 169 (493)
Q Consensus 90 ~~~q~~~v~~s~~~~~~~l~~~~~~~~~~~~~~~l~~~~~~~g~~~~l~~~a~~iaieRDWvv~i~~~~~~~~L~~~Na~ 169 (493)
.+.-.+... + .... .++..+.. .-.+.|.......+..... --||. ++ ++..+.++.
T Consensus 90 ~~~~~~~~~----~--~~~~------~~~~~l~~---~r~l~G~g~g~~~~~~~~~-~~~~~----~~---~~r~~~~~~ 146 (426)
T PRK12307 90 IVAYSVGTG----L--SGLA------SGVIMLTL---SRFIVGMGMAGEYACASTY-AVESW----PK---HLKSKASAF 146 (426)
T ss_pred HHHHHHHHH----H--HHHH------hHHHHHHH---HHHHHHHHHhhHHHHHHHH-HHHhC----CH---hHhhHhhhH
Confidence 755444311 1 1011 11111111 1122333333222222222 22333 22 457788888
Q ss_pred HHhHHHHHHhhhhHHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCcchhhhhhhhccCCCcccccccCCc
Q 011118 170 IRRIDLTCKLLAPAITGFIISFVSLQASAMTLAIWTTVTVWVEYWLFMSVYKGIPALAESSQRRIRRSMPIDMEQSTSMP 249 (493)
Q Consensus 170 mrriDl~~~l~gP~~~G~l~~~~s~~~a~~~i~~~n~~S~~ve~~~l~~Vy~~~p~L~~~~~~~~~~~~~~~~~~~~~~~ 249 (493)
....-.+..+++|.+.+.+.+..|.+.... .+....+.-.+ +....|+-.+..+++.+ . +. +
T Consensus 147 ~~~~~~lg~~~~~~l~~~l~~~~~w~~~f~----i~~~~~~~~~~----~~~~~p~~~~~~~~~~~---~----~~-~-- 208 (426)
T PRK12307 147 LVSGFGIGNIIAAYFMPSFAEAYGWRAAFF----VGLLPVLLVIY----IRARAPESKEWEEAKLS---G----KG-K-- 208 (426)
T ss_pred HHHHHhHHHHHHHHHHHHHcccCCHHHHHH----HHHHHHHHHHH----HHHHCCCChHHHHhhhh---c----cc-c--
Confidence 777777778888888887777677666543 23333332221 12234542211111000 0 00 0
Q ss_pred cccccccccccchhHHHHHHHHHHHHhhhccccccccceeeecccchHHHHHHHHHHHHh----hhhhhHHHHHHHHcCC
Q 011118 250 RERESLLSHDENNAELAEKRWRWKIIDWISNAPCVGAWQVYLKQEVVLPGVSLALLFFTV----LSFGTLMTATLEWEGI 325 (493)
Q Consensus 250 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~y~~q~v~la~~alalLy~tV----L~f~~l~~~yl~~~gl 325 (493)
+.... . + . ...+++..+++|.++.......+++.. ......+..|+.+.|.
T Consensus 209 ----------~~~~~--~----~----~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~ 263 (426)
T PRK12307 209 ----------HSQSA--W----S----V-----FSLSMKGLFNRAQFPLTLCVFIVLFSIFGANWPIFGLLPTYLAGEGF 263 (426)
T ss_pred ----------ccccc--h----h----h-----hhHHHHHHHhhchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCC
Confidence 00000 0 0 0 112344455666665544433333222 1245567888888999
Q ss_pred CchHHHHHHHHHHHHHHHHHHHHHHHHhhhchhhhhHHHHHHHHHHHHHHHHHHhhcc-hHHHHHHHHHHHHhhhchhhh
Q 011118 326 PAYIIGIARGISATIGIAATILYPILQSRISTLRTGLWSIWSQWFCLLICVASIWIHN-SLVAAYMLMVGVATSRLGLWM 404 (493)
Q Consensus 326 s~~~iG~~r~~~av~GllgT~~~~~l~~riGl~r~g~~~~~~q~~~L~~~v~~~~~~~-~~~s~~~l~~gi~~SR~GLw~ 404 (493)
++...|.+.+..++++++|+.+.+++.+|+|..+....+..... .........+. ........+.+......|.
T Consensus 264 ~~~~~~~~~~~~~~~~~~g~~~~g~l~dr~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-- 338 (426)
T PRK12307 264 DTGVVSNLMTAAAFGTVLGNIVWGLCADRIGLKKTFSIGLLMSF---LFIFPLFRIPQDNYLLLGACLFGLMATNVGV-- 338 (426)
T ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHH---HHHHHHHHHccccHHHHHHHHHHHHHhcccH--
Confidence 99999999999999999999999999999997776555543211 11111111221 1111222223332222232
Q ss_pred hhhhhhhhhhccCCCCcchhHHHHHHHHHHhh-HHHHHHHHHhccCCC
Q 011118 405 FDLSVIQQMQDLVPESDRCVVGGVQNSLQSTM-DLMAYTMGIIISNPQ 451 (493)
Q Consensus 405 fDl~~~~l~Qe~vp~~~rG~v~gv~~sl~~~f-~l~~~~~~ii~~~p~ 451 (493)
......+.||.+|++.||++.|...++.++. .++..+.+.+...-+
T Consensus 339 -~~~~~~~~~~~~p~~~~g~~~g~~~~~~~~~~~~gp~~~g~l~~~~g 385 (426)
T PRK12307 339 -GGLVPKFLYDYFPLEVRGLGTGLIYNLAATSGTFNSMAATWLGITMG 385 (426)
T ss_pred -hHHHHHHHHHhCcHHHHhhhhhHHHHHHhHHHHHHHHHHHHHHHccc
Confidence 2334567899999999999999998888877 667777777765544
No 15
>TIGR00893 2A0114 d-galactonate transporter.
Probab=99.65 E-value=2.4e-13 Score=138.08 Aligned_cols=379 Identities=14% Similarity=0.098 Sum_probs=212.8
Q ss_pred HHHHHHHHHHHHHhCCCchHHHHHHHHHHHHHHHhhhccceeeecccchhHHHHHHHHHHHHHHHHHHHHHHHHHhhccc
Q 011118 34 RMWEFSVGLYMISVWPDSLLFAAIYGAVESASIALFGPIVGHWVDKLTYVKVLQIWLVTQNLSFIVAGVSVITLLFFSSL 113 (493)
Q Consensus 34 r~~~Fa~~L~lv~l~~~sll~~sv~gl~~~l~~llfg~~vG~~vDr~~R~~v~~~~~~~q~~~v~~s~~~~~~~l~~~~~ 113 (493)
.+..++.|. +.+-++-|....+.......+..++.+++.|.+.||++||+++..+.+...+. +.+ ....
T Consensus 11 ~~~~~~~~~-~~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~d~~g~r~~~~~~~~~~~~~----~~~--~~~~---- 79 (399)
T TIGR00893 11 ANLSFAAPM-LQEDLGLSAAQYGYVFSAFSWGYVVGQFPGGWLLDRFGARKTLAVFIVIWGVF----TGL--QAFA---- 79 (399)
T ss_pred HhhhHhHHH-HHHhhCCChhhHHHHHHHHHHHHHHHHHhHHHHHHhcCcceeeHHHHHHHHHH----HHH--HHHH----
Confidence 566777787 44556667788889999999999999999999999999999988776433332 111 1111
Q ss_pred ccchhHHHHHHHHHHHHHHHHHHhhhhhhhhhhccceEEEecCCCChhhhhhhhhHHHhHHHHHHhhhhHHHHHHHHhhh
Q 011118 114 KSTNFIAFVLLVILTNISGAVGVISTLAGTILIEREWVVVISEGHPPEALTKMNSIIRRIDLTCKLLAPAITGFIISFVS 193 (493)
Q Consensus 114 ~~~~~~~~~~l~~~~~~~g~~~~l~~~a~~iaieRDWvv~i~~~~~~~~L~~~Na~mrriDl~~~l~gP~~~G~l~~~~s 193 (493)
.++..+.+. ..+.|.......++.... -.||. ++ ++..+.++........+.++||.++|.+.+..+
T Consensus 80 --~~~~~~~~~---~~l~g~~~~~~~~~~~~~-~~~~~----~~---~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~ 146 (399)
T TIGR00893 80 --GAYVSLYIL---RVLLGAAEAPFFPGIILI-VASWF----PA---SERATAVSIFNSAQGLGGIIGGPLVGWILIHFS 146 (399)
T ss_pred --cCHHHHHHH---HHHHHHHHHhhhhHHHHH-HHHhC----CH---HHHHHHHHHHHHhchHHHHHHHHHHHHHHHhCC
Confidence 122222111 123344444444443332 33443 32 568899999999999999999999999988777
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCcchhhhhhhhccCCCcccccccCCccccccccccccchhHHHHHHHHHH
Q 011118 194 LQASAMTLAIWTTVTVWVEYWLFMSVYKGIPALAESSQRRIRRSMPIDMEQSTSMPRERESLLSHDENNAELAEKRWRWK 273 (493)
Q Consensus 194 ~~~a~~~i~~~n~~S~~ve~~~l~~Vy~~~p~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 273 (493)
.+......++...+..++ .... .|+.+++++..+++.+..+.+. . ..+.+...+
T Consensus 147 ~~~~~~~~~~~~~~~~~~----~~~~---~~~~~~~~~~~~~~~~~~~~~~----~------~~~~~~~~~--------- 200 (399)
T TIGR00893 147 WQWAFIIEGVLGIIWGVL----WLKF---IPDPPQKAKWLTEEEKYIVVGG----L------LAEQQGKGP--------- 200 (399)
T ss_pred chHHHHHHHHHHHHHHHH----hhhe---ecCCCCccccCCHHHHhhcchh----h------ccccccccc---------
Confidence 666554333332222222 1111 1221111000000000000000 0 000000000
Q ss_pred HHhhhccccccccceeeecccchHHHHHHHHHH-HHhhhhhhHHHHHHHH-cCCCchHHHHHHHHHHHHHHHHHHHHHHH
Q 011118 274 IIDWISNAPCVGAWQVYLKQEVVLPGVSLALLF-FTVLSFGTLMTATLEW-EGIPAYIIGIARGISATIGIAATILYPIL 351 (493)
Q Consensus 274 ~~~~l~~~~~~~g~~~y~~q~v~la~~alalLy-~tVL~f~~l~~~yl~~-~gls~~~iG~~r~~~av~GllgT~~~~~l 351 (493)
. +...+.++..+++|.++..+...+++ +....+...+..|+.+ .|.++...|...+...+++++|.++.+++
T Consensus 201 -----~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~ 274 (399)
T TIGR00893 201 -----S-TPKKYQIKELLKDRRVWGLALGQFLVNIGLGFFLTWFPTYLVQERGLSILEAGFMASLPGIVGFIGMILGGRL 274 (399)
T ss_pred -----c-CCCccchHHHhcCHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHhcccHHHhhHHHHHHHHHHHHHHHHHHHH
Confidence 0 00123344456667666555555444 3334566677888875 79999999999999999999999999999
Q ss_pred HhhhchhhhhHHHH--HHHHHHHHHHHHHHhhcchHHHHHHHHHHHHhhhchhhhhhhhhhhhhhccCCCCcchhHHHHH
Q 011118 352 QSRISTLRTGLWSI--WSQWFCLLICVASIWIHNSLVAAYMLMVGVATSRLGLWMFDLSVIQQMQDLVPESDRCVVGGVQ 429 (493)
Q Consensus 352 ~~riGl~r~g~~~~--~~q~~~L~~~v~~~~~~~~~~s~~~l~~gi~~SR~GLw~fDl~~~~l~Qe~vp~~~rG~v~gv~ 429 (493)
.+|+|-.+...... ..-..++..+......+. .......+......-.+ ..+......+.+|.+|+++||+..|+.
T Consensus 275 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~g~~~~~~ 352 (399)
T TIGR00893 275 SDLLLRRGKSLVFARKTAIIAGLVLSLLMFATNY-VNIPYAALALVALGFFG-LGAGAIGWALISDNAPGNIAGLTGGLI 352 (399)
T ss_pred HHHHhhcccchhHHHHHHHHHHHHHHHHHHHhcc-chhHHHHHHHHHHHHhc-hhhhhHHHHHHHhhcChhHHHHHHHHH
Confidence 99998664111110 000011111222111110 01111111111111122 225778889999999999999999999
Q ss_pred HHHHHhh-HHHHHHHHHhccCCCCchHHHHHHHHHHHHHHHH
Q 011118 430 NSLQSTM-DLMAYTMGIIISNPQDFWKLILISVIVVTLAAIL 470 (493)
Q Consensus 430 ~sl~~~f-~l~~~~~~ii~~~p~~F~~l~~~S~~~V~~~~~l 470 (493)
+...++. -++..+.+.+....+.+.............+..+
T Consensus 353 ~~~~~~g~~~~~~i~g~l~~~~g~~~~~~~~~~~~~~~~~~~ 394 (399)
T TIGR00893 353 NSLGNLGGIVGPIVIGAIAATTGSFAGALMVVAALALIGALS 394 (399)
T ss_pred HHHHHHhhhhhhHHhhhhccCCCchhHHHHHHHHHHHHHHHH
Confidence 9998877 6777788887766554544444443333333333
No 16
>PRK15011 sugar efflux transporter B; Provisional
Probab=99.65 E-value=3.9e-12 Score=132.93 Aligned_cols=362 Identities=11% Similarity=0.093 Sum_probs=205.5
Q ss_pred CCCCCcccccCCCcchhhHHHHHHHHHHHHHhhHHHHHHHHHHHHHhCCCchHHHHHHHHHHHHHHHhhhccceeeeccc
Q 011118 1 MESEPLIVQEQPAITSFLTTYLYVAHFLARWGARMWEFSVGLYMISVWPDSLLFAAIYGAVESASIALFGPIVGHWVDKL 80 (493)
Q Consensus 1 ~~~~~~~~~~~~~~~~~~~~~L~~s~~lS~~Gdr~~~Fa~~L~lv~l~~~sll~~sv~gl~~~l~~llfg~~vG~~vDr~ 80 (493)
|.|+|....-+.= +...+.++++.+++..+..+.....|.++.+-+.-|.-..+.......+...+++++.|.+.||+
T Consensus 1 ~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~p~~~~~l~~~~~~s~~~~g~~~~~~~~~~~~~~~~~~~~~dr~ 78 (393)
T PRK15011 1 MHNSPAVSSAKSF--DLTSTAFLIVAFLTGIAGALQTPTLSIFLTDEVHARPAMVGFFFTGSAVIGILVSQFLAGRSDKR 78 (393)
T ss_pred CCCCcccccchhc--cchhHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhcc
Confidence 5666665544333 34678899999999999999999999999888887888888776666777888899999999999
Q ss_pred chhHH-HHHHHHHHHHHHHHHHHHHHHHHhhcccccchhHHHHHHHHHHHHHHHHHHhhhhhhhhhhccceEEEecCCCC
Q 011118 81 TYVKV-LQIWLVTQNLSFIVAGVSVITLLFFSSLKSTNFIAFVLLVILTNISGAVGVISTLAGTILIEREWVVVISEGHP 159 (493)
Q Consensus 81 ~R~~v-~~~~~~~q~~~v~~s~~~~~~~l~~~~~~~~~~~~~~~l~~~~~~~g~~~~l~~~a~~iaieRDWvv~i~~~~~ 159 (493)
.|||. +..+.+.- ++.+.+ +. +. .++..+ +++..+.+..+....+. ..++-+||. ++++
T Consensus 79 g~r~~~~~~~~~~~----~~~~~~-~~-~~------~~~~~l---~~~~~~~~~~~~~~~~~-~~~~~~~~~----~~~~ 138 (393)
T PRK15011 79 GDRKSLIVFCCLLG----VLACTL-FA-WN------RNYFVL---LFVGVFLSSFGSTANPQ-MFALAREHA----DKTG 138 (393)
T ss_pred cchhHHHHHHHHHH----HHHHHH-HH-Hh------hHHHHH---HHHHHHHHHHHHhhHHH-HHHHHHHHh----hhcc
Confidence 87765 44554221 111111 11 11 111111 11112233344444433 344446665 2211
Q ss_pred hhhhhhhhhHHHhHHHHHHhhhhHHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCcchhhhhhhhccCCC
Q 011118 160 PEALTKMNSIIRRIDLTCKLLAPAITGFIISFVSLQASAMTLAIWTTVTVWVEYWLFMSVYKGIPALAESSQRRIRRSMP 239 (493)
Q Consensus 160 ~~~L~~~Na~mrriDl~~~l~gP~~~G~l~~~~s~~~a~~~i~~~n~~S~~ve~~~l~~Vy~~~p~L~~~~~~~~~~~~~ 239 (493)
.+....|+.++..-.++.++||.++|.+....|.+...... ++..++-.+.+.. ..|+.++++ +
T Consensus 139 -~~~~~~~~~~~~~~~lg~~~g~~i~~~l~~~~gw~~~f~~~----~~~~~~~~~~~~~---~~~~~~~~~--------~ 202 (393)
T PRK15011 139 -REAVMFSSFLRAQVSLAWVIGPPLAYALAMGFSFTVMYLSA----AVAFIVCGVMVWL---FLPSMRKEL--------P 202 (393)
T ss_pred -chHHHHHHHHHHHHHHHHHHhhHHHHHHHHhcChHHHHHHH----HHHHHHHHHHHHh---hcCccCCCC--------c
Confidence 23456788888888899999999999999888887655322 2222222222221 234322100 0
Q ss_pred cccccccCCccccccccccccchhHHHHHHHHHHHHhhhccccccccceeeecccchHHHHHHHHHHHHh-hhhhhHHHH
Q 011118 240 IDMEQSTSMPRERESLLSHDENNAELAEKRWRWKIIDWISNAPCVGAWQVYLKQEVVLPGVSLALLFFTV-LSFGTLMTA 318 (493)
Q Consensus 240 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~y~~q~v~la~~alalLy~tV-L~f~~l~~~ 318 (493)
+ ++ . + . + . .++ +.+.....+..+.+.+.. -.+...+..
T Consensus 203 -~-~~-----~-------------~--~----~----~-----~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~p~ 241 (393)
T PRK15011 203 -L-AT-----G-------------T--L----E----A-----PRR------NRRDTLLLFVICTLMWGTNSLYIINMPL 241 (393)
T ss_pred -c-cc-----c-------------c--c----c----c-----ccc------ccccHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 0 00 0 0 0 0 0 000 011112222222222222 224446777
Q ss_pred HHH-HcCCCchHHHHHHHHHHHHHHHHHHHHHHHHhhhchhhhhHHHHHHHHHHHHHHHHHHhhcchHHHHHHHHHHHHh
Q 011118 319 TLE-WEGIPAYIIGIARGISATIGIAATILYPILQSRISTLRTGLWSIWSQWFCLLICVASIWIHNSLVAAYMLMVGVAT 397 (493)
Q Consensus 319 yl~-~~gls~~~iG~~r~~~av~GllgT~~~~~l~~riGl~r~g~~~~~~q~~~L~~~v~~~~~~~~~~s~~~l~~gi~~ 397 (493)
|++ +.|+++...|.+.+...+.++.+.++.+++.+|+|..|....+.. .+..........+.+.......+.+.+.
T Consensus 242 ~l~~~~~~~~~~~g~~~~~~~~~~i~~~~~~G~l~dr~g~~~~~~~~~~---~~~~~~~~~~~~~~~~~~l~~~~l~~~~ 318 (393)
T PRK15011 242 FIINELHLPEKLAGVMMGTAAGLEIPTMLIAGYFAKRLGKRFLMRVAAV---AGVCFYAGMLMAHSPAILLGLQLLNAIY 318 (393)
T ss_pred HHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhChHHHHHHHHH---HHHHHHHHHHHHhhHHHHHHHHHHHHHH
Confidence 887 479999999999998888889999999999999998776544432 1111111111222222211111111111
Q ss_pred hhchhhhhhhhhhhhhhccCCCCcchhHHHHHHHHHHhh-HHHHHHHHHhccC
Q 011118 398 SRLGLWMFDLSVIQQMQDLVPESDRCVVGGVQNSLQSTM-DLMAYTMGIIISN 449 (493)
Q Consensus 398 SR~GLw~fDl~~~~l~Qe~vp~~~rG~v~gv~~sl~~~f-~l~~~~~~ii~~~ 449 (493)
.|.- .-....+.||..|+ +||+.++..++..++. -++..+.+++...
T Consensus 319 --~g~~--~~~~~~~~~~~~p~-~~g~~~~~~~~~~~lg~~~g~~l~G~i~~~ 366 (393)
T PRK15011 319 --IGIL--GGIGMLYFQDLMPG-QAGSATTLYTNTSRVGWIIAGSLAGIVAEI 366 (393)
T ss_pred --HHHH--HHHHHHHHHHhCCC-CcchHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 1111 11223556888886 5999999987777665 7777888887654
No 17
>PRK11551 putative 3-hydroxyphenylpropionic transporter MhpT; Provisional
Probab=99.64 E-value=9.6e-13 Score=137.10 Aligned_cols=376 Identities=12% Similarity=-0.002 Sum_probs=218.1
Q ss_pred hHHHHHHHHHHHHHhhHHHHHHHHHHHHHhCCCchHHHHHHHHHHHHHHHhhhccceeeecccchhHHHHHHHHHHHHHH
Q 011118 18 LTTYLYVAHFLARWGARMWEFSVGLYMISVWPDSLLFAAIYGAVESASIALFGPIVGHWVDKLTYVKVLQIWLVTQNLSF 97 (493)
Q Consensus 18 ~~~~L~~s~~lS~~Gdr~~~Fa~~L~lv~l~~~sll~~sv~gl~~~l~~llfg~~vG~~vDr~~R~~v~~~~~~~q~~~v 97 (493)
.....+...++..+.......+.|.+..+ +.-|....+.......+..++.+++.|.+.||++|||++..+.+.-.+.
T Consensus 16 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~- 93 (406)
T PRK11551 16 TIGLCFLVALLEGLDLQSAGVAAPRMAQE-FGLDVAQMGWAFSAGILGLLPGALLGGRLADRIGRKRILIVSVALFGLF- 93 (406)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHH-hCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCchhHHHHHHHHHHH-
Confidence 34556778888888888899999986554 5668888999999999999999999999999999999988876432222
Q ss_pred HHHHHHHHHHHhhcccccchhHHHHHHHHHHHHHHHHHHhhhhhhhhhhccceEEEecCCCChhhhhhhhhHHHhHHHHH
Q 011118 98 IVAGVSVITLLFFSSLKSTNFIAFVLLVILTNISGAVGVISTLAGTILIEREWVVVISEGHPPEALTKMNSIIRRIDLTC 177 (493)
Q Consensus 98 ~~s~~~~~~~l~~~~~~~~~~~~~~~l~~~~~~~g~~~~l~~~a~~iaieRDWvv~i~~~~~~~~L~~~Na~mrriDl~~ 177 (493)
+. .. .. . .++..+... ..+.|.......+. ..++-.||. ++ ++..+.++.........
T Consensus 94 ---~~--~~-~~----~-~~~~~~~~~---~~l~G~~~~~~~~~-~~~~~~~~~----~~---~~r~~~~~~~~~~~~~g 151 (406)
T PRK11551 94 ---SL--AT-AQ----A-WDFPSLLVA---RLLTGVGLGGALPN-LIALTSEAV----GP---RLRGTAVSLMYCGVPFG 151 (406)
T ss_pred ---HH--HH-HH----h-ccHHHHHHH---HHHHHhhHHHHHHH-HHHHHHHHc----CH---HHHHHHHHHHHHHHHHH
Confidence 11 11 11 1 122221111 12334333333333 233344554 22 56788899988888999
Q ss_pred HhhhhHHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCcchhhhhhhhccCCCcccccccCCccccccccc
Q 011118 178 KLLAPAITGFIISFVSLQASAMTLAIWTTVTVWVEYWLFMSVYKGIPALAESSQRRIRRSMPIDMEQSTSMPRERESLLS 257 (493)
Q Consensus 178 ~l~gP~~~G~l~~~~s~~~a~~~i~~~n~~S~~ve~~~l~~Vy~~~p~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 257 (493)
..++|.+++.+....+.+....+..+...+.. .++.. ..|+..++.+++ + + ++
T Consensus 152 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~---~l~~~~~~~~~~-~---~---~~------------- 204 (406)
T PRK11551 152 GALASVIGVLAAGDAAWRHIFYVGGVGPLLLV----PLLMR---WLPESRAFAQAA-G---A---GK------------- 204 (406)
T ss_pred HHHHHHHHHHHccccCHHHHHHHHHHHHHHHH----HHHHH---hCCCChhHHhcc-C---c---ch-------------
Confidence 99999999888776666554432222222211 11111 234322110000 0 0 00
Q ss_pred cccchhHHHHHHHHHHHHhhhccccccccceeeecccchHH-HHHHHHHHHHhhhhhhHHHHHHHHcCCCchHHHHHHHH
Q 011118 258 HDENNAELAEKRWRWKIIDWISNAPCVGAWQVYLKQEVVLP-GVSLALLFFTVLSFGTLMTATLEWEGIPAYIIGIARGI 336 (493)
Q Consensus 258 ~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~y~~q~v~la-~~alalLy~tVL~f~~l~~~yl~~~gls~~~iG~~r~~ 336 (493)
+ .+...+...++ . +.+..+. .+.....+.....+...+..|+.++|+++...|...+.
T Consensus 205 -----~---~~~~~~~~~~~------~-------~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~g~s~~~~~~~~~~ 263 (406)
T PRK11551 205 -----Q---RAPVLRALFGE------G-------RATATLLLWISYFFTLIVLYFLLNWLPSLLVGQGLSRSQAGLVQIA 263 (406)
T ss_pred -----h---hhhhHHHHhhh------h-------hhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCChhhhhHHHHH
Confidence 0 00000110000 0 0011111 11111111111223345677888899999999999999
Q ss_pred HHHHHHHHHHHHHHHHhhhchhhhhHHHHHHHHHHHHHHHHH-HhhcchHHHHHHHHHHHHhhhchhhhhhhhhhhhhhc
Q 011118 337 SATIGIAATILYPILQSRISTLRTGLWSIWSQWFCLLICVAS-IWIHNSLVAAYMLMVGVATSRLGLWMFDLSVIQQMQD 415 (493)
Q Consensus 337 ~av~GllgT~~~~~l~~riGl~r~g~~~~~~q~~~L~~~v~~-~~~~~~~~s~~~l~~gi~~SR~GLw~fDl~~~~l~Qe 415 (493)
..++++.|.++.+++.+|+|..|.-...... ...+... ...+ ...... ...++..++.-........+.||
T Consensus 264 ~~~~~~~~~~~~g~l~dr~g~~~~~~~~~~~----~~~~~~~~~~~~-~~~~~~---~~~~~~g~~~~~~~~~~~~~~~~ 335 (406)
T PRK11551 264 FNIGGALGSLLIGALMDRLRPRRVVLLIYAG----ILASLAALAAAP-SFAGML---LAGFAAGLFVVGGQSVLYALAPL 335 (406)
T ss_pred HHHHHHHHHHHHHHHHHHHhHHHHHHHHHHH----HHHHHHHHHhcC-cHHHHH---HHHHHHHHHHHhHHHHHHHHHHH
Confidence 9999999999999999999977765543321 1111111 1122 111111 11122222222345566778999
Q ss_pred cCCCCcchhHHHHHHHHHHhh-HHHHHHHHHhccCCCCchHHHHHHHHHHHHHHHHHHH
Q 011118 416 LVPESDRCVVGGVQNSLQSTM-DLMAYTMGIIISNPQDFWKLILISVIVVTLAAILYTF 473 (493)
Q Consensus 416 ~vp~~~rG~v~gv~~sl~~~f-~l~~~~~~ii~~~p~~F~~l~~~S~~~V~~~~~l~~~ 473 (493)
.+|+++||++.|+.++..++. .++..+.+.+................+...+..+...
T Consensus 336 ~~p~~~~g~~~g~~~~~~~~g~~~g~~~~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~ 394 (406)
T PRK11551 336 FYPTQVRGTGVGAAVAVGRLGSMAGPLLAGQLLALGRSTVGVIGASIPVILVAALAALL 394 (406)
T ss_pred HcchhhhhhhhhHHHHhhhHHHHHHhhhHhhhhccCCchHHHHHHHHHHHHHHHHHHHH
Confidence 999999999999999999888 7888888888876555555555555555544444433
No 18
>PRK15402 multidrug efflux system translocase MdfA; Provisional
Probab=99.64 E-value=8.6e-13 Score=137.92 Aligned_cols=359 Identities=13% Similarity=0.118 Sum_probs=211.6
Q ss_pred HHHHHHHHHHHhhHHHHHHHHHHHHHhCCCchHHHHHHHHHHHHHHHhhhccceeeecccchhHHHHHHHHHHHHHHHHH
Q 011118 21 YLYVAHFLARWGARMWEFSVGLYMISVWPDSLLFAAIYGAVESASIALFGPIVGHWVDKLTYVKVLQIWLVTQNLSFIVA 100 (493)
Q Consensus 21 ~L~~s~~lS~~Gdr~~~Fa~~L~lv~l~~~sll~~sv~gl~~~l~~llfg~~vG~~vDr~~R~~v~~~~~~~q~~~v~~s 100 (493)
.+..+++++..+..+..-..|.+ .+-++-|....+.......+...+..++.|.+.||++|||++..+.+.-.+.
T Consensus 17 ~~~l~~~~~~~~~~~~~~~~~~~-~~~~~~s~~~~~~~~~~~~~~~~~~~~~~G~l~dr~g~r~~l~~~~~~~~~~---- 91 (406)
T PRK15402 17 CLVLFEFATYIANDMIQPGMLAV-VEDFNAGAEWVPTSMTAYLAGGMFLQWLLGPLSDRIGRRPVMLAGVAFFILT---- 91 (406)
T ss_pred HHHHHHHHHHhhhhhHhcchHHH-HHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCChHHHHHHHHHHHHH----
Confidence 35566667777888888888874 4556667777777777888888999999999999999999988776332222
Q ss_pred HHHHHHHHhhcccccchhHHHHHHHHHHHHHHHHHHhhhhhhhhhhccceEEEecCCCChhhhhhhhhHHHhHHHHHHhh
Q 011118 101 GVSVITLLFFSSLKSTNFIAFVLLVILTNISGAVGVISTLAGTILIEREWVVVISEGHPPEALTKMNSIIRRIDLTCKLL 180 (493)
Q Consensus 101 ~~~~~~~l~~~~~~~~~~~~~~~l~~~~~~~g~~~~l~~~a~~iaieRDWvv~i~~~~~~~~L~~~Na~mrriDl~~~l~ 180 (493)
+.. .... .++..+.. ...+.|+......+..... -.|+. ++ ++..+.++.+...-.....+
T Consensus 92 ~~~---~~~~-----~~~~~l~~---~~~l~G~~~~~~~~~~~~~-i~~~~----~~---~~~~~~~~~~~~~~~~~~~~ 152 (406)
T PRK15402 92 CLA---ILLA-----QSIEQFTL---LRFLQGIGLCFIGAVGYAA-IQESF----EE---ADAIKITALMANVALLAPLL 152 (406)
T ss_pred HHH---HHHH-----ccHHHHHH---HHHHHHhHhhhHHHHHHHH-HHHHh----Ch---hHHHHHHHHHHHHHHHHHHH
Confidence 111 1110 12212111 1123343333333332333 23454 22 45667788888888888899
Q ss_pred hhHHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCcchhhhhhhhccCCCcccccccCCcccccccccccc
Q 011118 181 APAITGFIISFVSLQASAMTLAIWTTVTVWVEYWLFMSVYKGIPALAESSQRRIRRSMPIDMEQSTSMPRERESLLSHDE 260 (493)
Q Consensus 181 gP~~~G~l~~~~s~~~a~~~i~~~n~~S~~ve~~~l~~Vy~~~p~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 260 (493)
||.+++.+.+..+.+.+..+..+.-.++.. .. +...|+-.++ + ++
T Consensus 153 g~~i~~~l~~~~~w~~~~~~~~~~~~~~~~----~~---~~~~~~~~~~---~---------~~---------------- 197 (406)
T PRK15402 153 GPLVGAALIHVLPWRGMFVLFAALAALSFF----GL---WRAMPETAGR---V---------GE---------------- 197 (406)
T ss_pred HHHHHHHHHHccCccHHHHHHHHHHHHHHH----HH---HHhCCCCCcc---c---------cc----------------
Confidence 999999999887877666444444333332 11 1123431100 0 00
Q ss_pred chhHHHHHHHHHHHHhhhccccccccceeeecccchHHHHHHH-HHHHHhhhhhhHHHHHHH-HcCCCchHHHHHHHHHH
Q 011118 261 NNAELAEKRWRWKIIDWISNAPCVGAWQVYLKQEVVLPGVSLA-LLFFTVLSFGTLMTATLE-WEGIPAYIIGIARGISA 338 (493)
Q Consensus 261 ~~~~~~~~~~~~~~~~~l~~~~~~~g~~~y~~q~v~la~~ala-lLy~tVL~f~~l~~~yl~-~~gls~~~iG~~r~~~a 338 (493)
+... ++ ..++++..+++|.++...... +.++....+....+.|+. ..|+++.+.|.......
T Consensus 198 ~~~~-------~~---------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~g~~~~~~g~~~~~~~ 261 (406)
T PRK15402 198 KLSL-------KE---------LGRDYKLVLKNRRFVAGALALGLVSLPLLAWIALSPVILISGEQLSSYEYGLLQVPVF 261 (406)
T ss_pred cccH-------HH---------HHHHHHHHHcCcHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHhCCCHHHHHHHHHHHH
Confidence 0000 00 123344456677655443333 332333445556677776 48999999999888888
Q ss_pred HHHHHHHHHHHHHHhhhchhhhhHHHHHHHHHHHHHHHHHH-hhcchHHHHHHHHHHHHhhhchhhhhhhhhhhhhhccC
Q 011118 339 TIGIAATILYPILQSRISTLRTGLWSIWSQWFCLLICVASI-WIHNSLVAAYMLMVGVATSRLGLWMFDLSVIQQMQDLV 417 (493)
Q Consensus 339 v~GllgT~~~~~l~~riGl~r~g~~~~~~q~~~L~~~v~~~-~~~~~~~s~~~l~~gi~~SR~GLw~fDl~~~~l~Qe~v 417 (493)
++.+.|.++.+++.+|+|..|.-..+...+.+.+....... ..+.+ ...++.+.++-.+|.-..........+. .
T Consensus 262 ~~~~~g~~~~g~l~~r~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~---~~~~~~~~~~~g~g~~~~~~~~~~~~~~-~ 337 (406)
T PRK15402 262 GALIAGNLTLARLTSRRPLRSLIRMGLWPMVAGLLLAALATVISSHA---YLWLTAGLSLYAFGIGLANAGLYRLTLF-S 337 (406)
T ss_pred HHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHccccc---HHHHHHHHHHHHHHHHHHhhhHHHHHhh-h
Confidence 88899999999999999987765555432211111111111 11111 1112233333333433334444444443 3
Q ss_pred CCCcchhHHHHHHHHHHhh-HHHHHHHHHhccCCCCchHHHH
Q 011118 418 PESDRCVVGGVQNSLQSTM-DLMAYTMGIIISNPQDFWKLIL 458 (493)
Q Consensus 418 p~~~rG~v~gv~~sl~~~f-~l~~~~~~ii~~~p~~F~~l~~ 458 (493)
++++||++++..+..+.+. .++..+.+.+....+.......
T Consensus 338 ~~~~~g~~~~~~~~~~~~~~~~g~~~~~~l~~~~~~~~~~~~ 379 (406)
T PRK15402 338 SDVSKGTVSAAMGMLSMLIFTVGIELSKHAYLGGGNGLFNLF 379 (406)
T ss_pred ccccccHHHHHHHHHHHHHHHHHHHHHHhcccCCchHHHHHH
Confidence 5589999999999999888 8888999998887776665554
No 19
>PRK11652 emrD multidrug resistance protein D; Provisional
Probab=99.63 E-value=2.3e-12 Score=134.03 Aligned_cols=350 Identities=15% Similarity=0.148 Sum_probs=202.1
Q ss_pred hhhHHHHHHHHHHHHHhhHHHHHHHHHH--HHHhCCCchHHHHHHHHHHHHHHHhhhccceeeecccchhHHHHHHHHHH
Q 011118 16 SFLTTYLYVAHFLARWGARMWEFSVGLY--MISVWPDSLLFAAIYGAVESASIALFGPIVGHWVDKLTYVKVLQIWLVTQ 93 (493)
Q Consensus 16 ~~~~~~L~~s~~lS~~Gdr~~~Fa~~L~--lv~l~~~sll~~sv~gl~~~l~~llfg~~vG~~vDr~~R~~v~~~~~~~q 93 (493)
.|+++.++..-+++..+.-...+..|.+ +..-++-|....+.......++.++..++.|.+.||++|||++..+.+.-
T Consensus 4 ~~~~~~l~~~~~~~~~~~~~~~~~~p~~~~i~~~~~~s~~~~~~~~~~~~~~~~~~~~~~G~l~Dr~grr~~~~~~~~~~ 83 (394)
T PRK11652 4 QRNVNLLFMLVLLVAVGQMAQTIYVPAIADMARDLNVREGAVQAVMAAYLLTYGLSQLFYGPLSDRVGRRPVILVGMSIF 83 (394)
T ss_pred hhhHHHHHHHHHHHHHHHHHHHHHhccHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHhhhhHHHhcCChHHHHHHHHHH
Confidence 3477777777777766665555444432 33445667778888888899999999999999999999999988775433
Q ss_pred HHHHHHHHHHHHHHHhhcccccchhHHHHHHHHHHHHHHHHHHhhhhhhhhhhccceEEEecCCCChhhhhhhhhHHHhH
Q 011118 94 NLSFIVAGVSVITLLFFSSLKSTNFIAFVLLVILTNISGAVGVISTLAGTILIEREWVVVISEGHPPEALTKMNSIIRRI 173 (493)
Q Consensus 94 ~~~v~~s~~~~~~~l~~~~~~~~~~~~~~~l~~~~~~~g~~~~l~~~a~~iaieRDWvv~i~~~~~~~~L~~~Na~mrri 173 (493)
.+.. . .. .. . .+...+... ..+.|.......+... .+-+|+. ++ +++.+.|+...-.
T Consensus 84 ~~~~----~--~~-~~----~-~~~~~l~~~---~~~~g~~~~~~~~~~~-~~~~~~~----~~---~~~~~~~~~~~~~ 140 (394)
T PRK11652 84 ILGT----L--VA-LF----A-HSLTVLIAA---SAIQGLGTGVGGVMAR-TLPRDLY----EG---TQLRHANSLLNMG 140 (394)
T ss_pred HHHH----H--HH-HH----H-ccHHHHHHH---HHHHHhhhhHHHHHHH-HHHHHhc----CH---HHHHHHHHHHHHH
Confidence 2221 1 11 11 1 122222111 1222333322232222 2234544 22 5688899998888
Q ss_pred HHHHHhhhhHHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCcchhhhhhhhccCCCcccccccCCccccc
Q 011118 174 DLTCKLLAPAITGFIISFVSLQASAMTLAIWTTVTVWVEYWLFMSVYKGIPALAESSQRRIRRSMPIDMEQSTSMPRERE 253 (493)
Q Consensus 174 Dl~~~l~gP~~~G~l~~~~s~~~a~~~i~~~n~~S~~ve~~~l~~Vy~~~p~L~~~~~~~~~~~~~~~~~~~~~~~~~~~ 253 (493)
-....++||.++|.+.+..|.+....+..++..+..+. . +...||..++ ++
T Consensus 141 ~~~~~~~g~~i~~~l~~~~g~~~~f~~~~~~~~~~~~~---~----~~~~~~~~~~-------------~~--------- 191 (394)
T PRK11652 141 ILVSPLLAPLIGGLLTTLFGWRACYLFLLLLGAGVTFS---M----ARWMPETRPA-------------DA--------- 191 (394)
T ss_pred HHHHHHHHHHHHHHHHhccChHHHHHHHHHHHHHHHHH---H----HHhCCccCcc-------------cc---------
Confidence 88899999999999988778776654433333322111 1 1123431100 00
Q ss_pred cccccccchhHHHHHHHHHHHHhhhccccccccceeeecccchHHHHHHHHHHHHh-hhhhhHHHHHHHH-cCCCchHHH
Q 011118 254 SLLSHDENNAELAEKRWRWKIIDWISNAPCVGAWQVYLKQEVVLPGVSLALLFFTV-LSFGTLMTATLEW-EGIPAYIIG 331 (493)
Q Consensus 254 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~y~~q~v~la~~alalLy~tV-L~f~~l~~~yl~~-~gls~~~iG 331 (493)
... + .+++++..+++|.++..+...+.++.. ..+......|..+ .|+++...|
T Consensus 192 -------~~~---~---------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~ 246 (394)
T PRK11652 192 -------RRT---R---------------VLASYRTLLSNRRFNCYLLMLIGTLAGIAVFEACSGVLMGAVLGLSSMTVS 246 (394)
T ss_pred -------chh---H---------------HHHHHHHHHcChHHHHHHHHHHHHHHHHHHHHHhChHHHHHHcCCCHHHHH
Confidence 000 0 012233344566665544444333322 2344445557775 899999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhhhchhhhhHHHHHHHHHHHHHHHHHHhhcc--hHHHHHHHHHHHHhhhchhhhhhhhh
Q 011118 332 IARGISATIGIAATILYPILQSRISTLRTGLWSIWSQWFCLLICVASIWIHN--SLVAAYMLMVGVATSRLGLWMFDLSV 409 (493)
Q Consensus 332 ~~r~~~av~GllgT~~~~~l~~riGl~r~g~~~~~~q~~~L~~~v~~~~~~~--~~~s~~~l~~gi~~SR~GLw~fDl~~ 409 (493)
++.....++.++|+++.+++.+|.+ |....+.. +...+....+.+. ...+...+..+.++.-+|.-......
T Consensus 247 ~~~~~~~~~~~~g~~~~~~l~~~~~--~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~ 320 (394)
T PRK11652 247 ILFILPIPAAFFGAWFAGRPNKRFS--TLMWQSVI----CCLLAGLLMWIPGWFGVMNVWTLLVPAALFFFGAGMLFPLA 320 (394)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHH--HHHHHHHH----HHHHHHHHHHHHHHhccccHHHHHHHHHHHHHHHHHHHHHH
Confidence 9999999999999999999999998 33333322 1111111111110 00111222333344444444566777
Q ss_pred hhhhhccCCCCcchhHHHHHHHHHHhh-HHHHHHHHHhccC
Q 011118 410 IQQMQDLVPESDRCVVGGVQNSLQSTM-DLMAYTMGIIISN 449 (493)
Q Consensus 410 ~~l~Qe~vp~~~rG~v~gv~~sl~~~f-~l~~~~~~ii~~~ 449 (493)
+...|+..|+ ++|+.+++.++.+++. -++..+.+.+...
T Consensus 321 ~~~~~~~~~~-~~g~~~~~~~~~~~lg~~~~~~~~~~~~~~ 360 (394)
T PRK11652 321 TSGAMEPFPY-LAGTAGALLGGLQNIGSGLAALLSAMLPQT 360 (394)
T ss_pred HHHHHhhccc-cchHHHHHHHHHHHHHHHHHHHHHHHccCC
Confidence 8888888874 7899999998887766 6666666666433
No 20
>TIGR00901 2A0125 AmpG-related permease.
Probab=99.63 E-value=2.2e-13 Score=139.60 Aligned_cols=325 Identities=13% Similarity=0.029 Sum_probs=191.3
Q ss_pred HHHHHHHHHHHHhCCCchHHHHHHHHHHHHHHHhhhccceeeeccc-----chhHH-HHHHHHHHHHHHHHHHHHHHHHH
Q 011118 35 MWEFSVGLYMISVWPDSLLFAAIYGAVESASIALFGPIVGHWVDKL-----TYVKV-LQIWLVTQNLSFIVAGVSVITLL 108 (493)
Q Consensus 35 ~~~Fa~~L~lv~l~~~sll~~sv~gl~~~l~~llfg~~vG~~vDr~-----~R~~v-~~~~~~~q~~~v~~s~~~~~~~l 108 (493)
+..+++|.++.+. .-|....+.+.+. .++..+ .+..|.++||+ +|||. +..+.+.-.++ .. .+..
T Consensus 6 ~~~~~~~~~~~~~-g~s~~~~g~~~~~-~~~~~~-~~~~g~~~Dr~~~~~~Grr~~~l~~~~~~~~~~----~~--~l~~ 76 (356)
T TIGR00901 6 LVGNTLPYWLRSK-NVSLKTIGFFSLV-GLPYSL-KFLWSPLVDTVYLPFFGRRRSWLVLTQVLLLSL----LL--ILSF 76 (356)
T ss_pred hHHhHHHHHHHHc-CCCHHHHHHHHHH-HHHHHH-HHHHHHHHhcccCCCCCccHHHHHHHHHHHHHH----HH--HHHc
Confidence 3457788877765 5577788888765 677765 99999999998 47675 45444322222 11 1111
Q ss_pred hhcccccchhHHHHHHHHHHHHHHHHHHhhhhhhhhhhccceEEEecCCCChhhhhhhhhHHHhHHHHHHhhhhHHHHHH
Q 011118 109 FFSSLKSTNFIAFVLLVILTNISGAVGVISTLAGTILIEREWVVVISEGHPPEALTKMNSIIRRIDLTCKLLAPAITGFI 188 (493)
Q Consensus 109 ~~~~~~~~~~~~~~~l~~~~~~~g~~~~l~~~a~~iaieRDWvv~i~~~~~~~~L~~~Na~mrriDl~~~l~gP~~~G~l 188 (493)
.++ ...-+..+ .+..+.+......+++.+.. ++.++++ +++.+.|+....--....+++|.+++.+
T Consensus 77 ~~~--~~~l~~l~----~~~~~~~~~~~~~~~~~~a~-----~~~~~~~---~~r~~~~~~~~~~~~~G~~~~~~l~~~l 142 (356)
T TIGR00901 77 LVP--STDLPLLA----GLAFLIAFFSATQDIALDAW-----RLEILSD---EELGYGSTIYIVGYRAGMLLSGSLALVL 142 (356)
T ss_pred CCc--chhHHHHH----HHHHHHHHHHHHHHHHHHHH-----HHHhCCH---hhhchHHHHHHHHHHHHHHHHHHHHHHH
Confidence 110 11111122 11122334444445554433 3344433 5688999998888999999999999999
Q ss_pred HHhhh--------hHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCcchhhhhhhhccCCCcccccccCCcccccccccccc
Q 011118 189 ISFVS--------LQASAMTLAIWTTVTVWVEYWLFMSVYKGIPALAESSQRRIRRSMPIDMEQSTSMPRERESLLSHDE 260 (493)
Q Consensus 189 ~~~~s--------~~~a~~~i~~~n~~S~~ve~~~l~~Vy~~~p~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 260 (493)
.+..| .+... .++++..++-.+. ... ..||..++ ++.
T Consensus 143 ~~~~g~~~~~~~~wr~~f----~i~ai~~l~~~~~-~~~--~~~e~~~~-------------~~~--------------- 187 (356)
T TIGR00901 143 ASPEFANTGLITLWGYIF----FWTALLILPGLLV-TLF--LAKEPQED-------------ASV--------------- 187 (356)
T ss_pred hhhcccccccccccHHHH----HHHHHHHHHHHHH-HHH--hccCCCcc-------------ccc---------------
Confidence 98877 55555 3344444442222 211 12321100 000
Q ss_pred chhHHHHHHHHHHHHhhhccccccccceeeecccc---hHHHHHHHHHH-HHhhhhhhHHHHHHHHcCCCchHHHHHHHH
Q 011118 261 NNAELAEKRWRWKIIDWISNAPCVGAWQVYLKQEV---VLPGVSLALLF-FTVLSFGTLMTATLEWEGIPAYIIGIARGI 336 (493)
Q Consensus 261 ~~~~~~~~~~~~~~~~~l~~~~~~~g~~~y~~q~v---~la~~alalLy-~tVL~f~~l~~~yl~~~gls~~~iG~~r~~ 336 (493)
.... . ++ .+++++..+++|. ++..+...+++ +..-.....++.|+.+.|+++.++|.+.++
T Consensus 188 ~~~~--~----~~---------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~~g~~~~~ 252 (356)
T TIGR00901 188 PKPL--T----QA---------VLKPIREFFQRKNMIQALLLLLLIVLYKLGDSAATVLTTLFLLDMGFSKEEIALVAKI 252 (356)
T ss_pred chhH--H----HH---------HHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHhHH
Confidence 0000 0 00 1223344455554 33333333444 333345667888988899999999988876
Q ss_pred -HHHHHHHHHHHHHHHHhhhchhhhhHHHHHHHHHHHHHHHHHHhhcchH-------HHHHHHHHHHHhhhchhhhhhhh
Q 011118 337 -SATIGIAATILYPILQSRISTLRTGLWSIWSQWFCLLICVASIWIHNSL-------VAAYMLMVGVATSRLGLWMFDLS 408 (493)
Q Consensus 337 -~av~GllgT~~~~~l~~riGl~r~g~~~~~~q~~~L~~~v~~~~~~~~~-------~s~~~l~~gi~~SR~GLw~fDl~ 408 (493)
+.+.+++|.++.+++.+|+|..|...++...+.+.. ....+..... .....+....++..++.-.+...
T Consensus 253 ~~~~~~~~g~~~~g~l~~r~g~~~~l~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~ 329 (356)
T TIGR00901 253 NGLLGAILGGLIGGIIMQPLNILYALLLFGIVQALTN---AGFVWLASNGHHDGITFPHLLMLFLTITLEAVTGGLGTVA 329 (356)
T ss_pred HHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHH---HHHHHHHhcCcccccccchHHHHHHHHHHHHHHhHHHHHH
Confidence 457889999999999999998887665554322211 1111211000 12233344455556666778999
Q ss_pred hhhhhhccCCCCcchhHHHHHHHHHHh
Q 011118 409 VIQQMQDLVPESDRCVVGGVQNSLQST 435 (493)
Q Consensus 409 ~~~l~Qe~vp~~~rG~v~gv~~sl~~~ 435 (493)
...++||.+|+++||++.|..++++++
T Consensus 330 ~~~~~~~~~p~~~~g~~~g~~~~~~~~ 356 (356)
T TIGR00901 330 FVAFLSKLSNPKFGATQMALLSSLSAL 356 (356)
T ss_pred HHHHHHHhcCCCccHHHHHHHHHHHhC
Confidence 999999999999999999999988763
No 21
>TIGR00891 2A0112 putative sialic acid transporter.
Probab=99.62 E-value=8.4e-13 Score=135.99 Aligned_cols=375 Identities=11% Similarity=0.069 Sum_probs=213.1
Q ss_pred hhHHHHHHHHHHHHHhhHHHHHHHHHHHHHhCCCchHHHHHHHHHHHHHHHhhhccceeeecccchhHHHHHHHHHHHHH
Q 011118 17 FLTTYLYVAHFLARWGARMWEFSVGLYMISVWPDSLLFAAIYGAVESASIALFGPIVGHWVDKLTYVKVLQIWLVTQNLS 96 (493)
Q Consensus 17 ~~~~~L~~s~~lS~~Gdr~~~Fa~~L~lv~l~~~sll~~sv~gl~~~l~~llfg~~vG~~vDr~~R~~v~~~~~~~q~~~ 96 (493)
+.+...+.+++++..+.-+..+..|.+. .-++-|....+.......+...+.+++.|.+.||++||+++..+.+...+.
T Consensus 12 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~-~~~~~s~~~~g~~~~~~~~~~~~~~~~~G~l~Dr~g~r~~~~~~~~~~~~~ 90 (405)
T TIGR00891 12 NAFSAAWLGWLLDAFDFFLVALVLAEVA-GEFGLTTVDAASLISAALISRWFGALMFGLWGDRYGRRLPMVTSIVLFSAG 90 (405)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHhCCChhhHHHHHHHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHH
Confidence 5678889999999999999999999854 455667788898888899999999999999999999999988775333222
Q ss_pred HHHHHHHHHHHHhhcccccchhHHHHHHHHHHHHHHHHHHhhhhhhhhhhccceEEEecCCCChhhhhhhhhHHHhHHHH
Q 011118 97 FIVAGVSVITLLFFSSLKSTNFIAFVLLVILTNISGAVGVISTLAGTILIEREWVVVISEGHPPEALTKMNSIIRRIDLT 176 (493)
Q Consensus 97 v~~s~~~~~~~l~~~~~~~~~~~~~~~l~~~~~~~g~~~~l~~~a~~iaieRDWvv~i~~~~~~~~L~~~Na~mrriDl~ 176 (493)
+.+ .... .++..+ ++...+.|+......+..... -.||. ++ ++..+.++.......+
T Consensus 91 ----~~~--~~~~------~~~~~l---~~~~~l~G~~~~~~~~~~~~~-i~~~~----~~---~~~~~~~~~~~~~~~~ 147 (405)
T TIGR00891 91 ----TLA--CGFA------PGYITM---FIARLVIGIGMGGEYGSSAAY-VIESW----PK---HLRNKASGLLISGYAV 147 (405)
T ss_pred ----HHH--HHHh------ccHHHH---HHHHHHHHhhhhhhhHHHHHH-HHHhC----Ch---hhhhHHHHHHHHHHHH
Confidence 111 1111 112111 112223344444443332222 23554 22 5678899999999999
Q ss_pred HHhhhhHHHHHHHHhhh--hHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCcchhhhhhhhccCCCcccccccCCcccccc
Q 011118 177 CKLLAPAITGFIISFVS--LQASAMTLAIWTTVTVWVEYWLFMSVYKGIPALAESSQRRIRRSMPIDMEQSTSMPRERES 254 (493)
Q Consensus 177 ~~l~gP~~~G~l~~~~s--~~~a~~~i~~~n~~S~~ve~~~l~~Vy~~~p~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 254 (493)
+.++||.+++.+....+ .+.... ...+..+.-.+. +.+.||.++.+++++++ + +..+ + .+
T Consensus 148 g~~~~~~l~~~l~~~~~~~w~~~f~----~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~--~-~~~~--~-~~---- 209 (405)
T TIGR00891 148 GAVVAAQVYSLVVPVWGDGWRALFF----ISILPIIFALWL----RKNIPEAEDWKEKHAGK--A-LVRT--M-VD---- 209 (405)
T ss_pred HHHHHHHHHHHHHHhcCccHHHHHH----HHHHHHHHHHHH----HHhCCCChhHHHHhhhh--h-hhhh--H-HH----
Confidence 99999999999988765 443331 222222222111 22455532211111000 0 0000 0 00
Q ss_pred ccccccchhHHHHHHHHHHHHhhhcccccccccee-eecc-cchHHHHHHH-HHHHHhhhhhhHHHHHHH-HcCCCchHH
Q 011118 255 LLSHDENNAELAEKRWRWKIIDWISNAPCVGAWQV-YLKQ-EVVLPGVSLA-LLFFTVLSFGTLMTATLE-WEGIPAYII 330 (493)
Q Consensus 255 ~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~-y~~q-~v~la~~ala-lLy~tVL~f~~l~~~yl~-~~gls~~~i 330 (493)
+.... + ...+...++ ....++. ..+. +.+....... +.++...+....++.|++ +.|+++.+.
T Consensus 210 -----~~~~~--~-~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~ 276 (405)
T TIGR00891 210 -----ILYGG--E-HRIANIVMT-----LAAAMVQSAGKRWPTFVYLVVLVLFANLYSHPIQDLLPTYLKADLGLSPHTV 276 (405)
T ss_pred -----HHhcc--c-hhhhhhhhh-----hhHHhhhhhhhhhHHHHHHHHHHHHHHHHHhhhhhhhHHHHHHHhCCCHHHH
Confidence 00000 0 000000000 0000000 0111 1121111111 222222345566788887 479999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhhhchhhhhHHHHHHHHHHHHHHHHHHhhcchHHH--HHHHHHHHHhhhchhhhhhhh
Q 011118 331 GIARGISATIGIAATILYPILQSRISTLRTGLWSIWSQWFCLLICVASIWIHNSLVA--AYMLMVGVATSRLGLWMFDLS 408 (493)
Q Consensus 331 G~~r~~~av~GllgT~~~~~l~~riGl~r~g~~~~~~q~~~L~~~v~~~~~~~~~~s--~~~l~~gi~~SR~GLw~fDl~ 408 (493)
|.+.+...+++++|+++.+++.+|+|..|.-..+... +...+......+.+.+. ...++.+... .+.+ ..
T Consensus 277 ~~~~~~~~~~~~~g~~~~g~l~dr~g~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~---~~ 348 (405)
T TIGR00891 277 ANIVVFSNIGAIVGGCVFGFLGDWLGRRKAYVCSLLA---GQLLIIPVFAIGANVAVLGLGLFFQQMLV--QGIW---GI 348 (405)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhCchhhhHHHHHH---HHHHHHHHHHhCCchHHHHHHHHHHHHHH--ccch---hh
Confidence 9999999999999999999999999987765544431 11111111111222111 1112222211 1222 23
Q ss_pred hhhhhhccCCCCcchhHHHHHHHHHHhh-HHHHHHHHHhccCCCCch
Q 011118 409 VIQQMQDLVPESDRCVVGGVQNSLQSTM-DLMAYTMGIIISNPQDFW 454 (493)
Q Consensus 409 ~~~l~Qe~vp~~~rG~v~gv~~sl~~~f-~l~~~~~~ii~~~p~~F~ 454 (493)
...++||.+|+++||+++|+.+++.++. .++..+.+.+...-+.+.
T Consensus 349 ~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~~g~~~~g~l~~~~g~~~ 395 (405)
T TIGR00891 349 LPKHLGEYFPTDQRAAGLGFTYQLGNLGGALAPIIGALLAQRLDEYG 395 (405)
T ss_pred HHHHHhhhCCcchhHHHhhHHHHHHHHHHHHHHHHHHHHHHhccccc
Confidence 4467899999999999999999988877 888888888887655443
No 22
>PRK03545 putative arabinose transporter; Provisional
Probab=99.62 E-value=2.7e-12 Score=133.65 Aligned_cols=350 Identities=12% Similarity=0.042 Sum_probs=201.7
Q ss_pred HHHHHHhhHHHHHHHHHHHHHhCCCchHHHHHHHHHHHHHHHhhhccceeeecccchhHHHHHHHHHHHHHHHHHHHHHH
Q 011118 26 HFLARWGARMWEFSVGLYMISVWPDSLLFAAIYGAVESASIALFGPIVGHWVDKLTYVKVLQIWLVTQNLSFIVAGVSVI 105 (493)
Q Consensus 26 ~~lS~~Gdr~~~Fa~~L~lv~l~~~sll~~sv~gl~~~l~~llfg~~vG~~vDr~~R~~v~~~~~~~q~~~v~~s~~~~~ 105 (493)
.++-.-++++-.-..|.+ .+-++-|....+.......+...+++++.|.+.||++|||++..+.+.- ++++..
T Consensus 18 ~~~~~~~~~~~~~~~~~l-~~~~~~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~----~~~~~~-- 90 (390)
T PRK03545 18 AFIFNTTEFVPVGLLSDI-AQSFHMQTAQVGLMLTIYAWVVALMSLPLMLLTSNVERRKLLIGLFVLF----IASHVL-- 90 (390)
T ss_pred HHHHHhHHHHHHcchHHH-HhHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHcCCChHHHHHHHHHHH----HHHHHH--
Confidence 333334444433345664 4556778888888888888888899999999999999999998875322 222221
Q ss_pred HHHhhcccccchhHHHHHHHHHHHHHHHHHHhhhhhhhhhhccceEEEecCCCChhhhhhhhhHHHhHHHHHHhhhhHHH
Q 011118 106 TLLFFSSLKSTNFIAFVLLVILTNISGAVGVISTLAGTILIEREWVVVISEGHPPEALTKMNSIIRRIDLTCKLLAPAIT 185 (493)
Q Consensus 106 ~~l~~~~~~~~~~~~~~~l~~~~~~~g~~~~l~~~a~~iaieRDWvv~i~~~~~~~~L~~~Na~mrriDl~~~l~gP~~~ 185 (493)
. .. . .++..+.+. -.+.|.......+.....+ -||. ++ ++..+.++.+..-...+.++||.++
T Consensus 91 ~-~~----~-~~~~~l~~~---r~~~G~~~~~~~~~~~~~i-~~~~----~~---~~r~~~~g~~~~~~~~g~~ig~~l~ 153 (390)
T PRK03545 91 S-AL----A-WNFTVLLIS---RIGIAFAHAIFWSITASLA-IRVA----PA---GKKAQALSLLATGTALAMVLGLPLG 153 (390)
T ss_pred H-HH----h-ccHHHHHHH---HHHHHHHHHHHHHHHHHHH-HHhC----Ch---hhhhhHHHHHHHHHHHHHHHHhhHH
Confidence 1 11 1 111111111 1223433333333322222 2343 33 5678999999999999999999999
Q ss_pred HHHHHhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCcchhhhhhhhccCCCcccccccCCccccccccccccchhHH
Q 011118 186 GFIISFVSLQASAMTLAIWTTVTVWVEYWLFMSVYKGIPALAESSQRRIRRSMPIDMEQSTSMPRERESLLSHDENNAEL 265 (493)
Q Consensus 186 G~l~~~~s~~~a~~~i~~~n~~S~~ve~~~l~~Vy~~~p~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 265 (493)
+.+.+..|.+.......+...+.. .+.. ...|+.++ + ++ .+
T Consensus 154 ~~l~~~~gw~~~f~~~~~~~~l~~----~~~~---~~~~~~~~------------~-~~------------------~~- 194 (390)
T PRK03545 154 RVIGQYLGWRTTFLAIGGGALITL----LLLI---KLLPLLPS------------E-HS------------------GS- 194 (390)
T ss_pred HHHHHHhcHHHHHHHHHHHHHHHH----HHHH---HhCCCCCC------------C-Cc------------------ch-
Confidence 999998888776644333332222 1111 12332110 0 00 00
Q ss_pred HHHHHHHHHHhhhccccccccceeeecccchHHHHHHHHHH-HHhhhhhhHHHHHHHH-cCCCchHHHHHHHHHHHHHHH
Q 011118 266 AEKRWRWKIIDWISNAPCVGAWQVYLKQEVVLPGVSLALLF-FTVLSFGTLMTATLEW-EGIPAYIIGIARGISATIGIA 343 (493)
Q Consensus 266 ~~~~~~~~~~~~l~~~~~~~g~~~y~~q~v~la~~alalLy-~tVL~f~~l~~~yl~~-~gls~~~iG~~r~~~av~Gll 343 (493)
. ++++..+++|.++..+....++ +...+..+.+..|+.+ .|+++...|.+.+..+++++.
T Consensus 195 -~-----------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~s~~~~~~~~~~~~~~~~~ 256 (390)
T PRK03545 195 -L-----------------KSLPLLFRRPALVSLYLLTVVVVTAHFTAYSYIEPFVQQVAGLSENFATLLLLLFGGAGII 256 (390)
T ss_pred -H-----------------HHHHHHHhCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCccHHHHHHHHHHHHHHH
Confidence 0 0112234556555444443333 2222333455667775 699999999999999999999
Q ss_pred HHHHHHHHHhhhchhhhhHHHHHHHHHHHHHHHHHH-hhcchHHHHHHHHHHHHhhhchhhhhhhhhhhhhhccCCCCcc
Q 011118 344 ATILYPILQSRISTLRTGLWSIWSQWFCLLICVASI-WIHNSLVAAYMLMVGVATSRLGLWMFDLSVIQQMQDLVPESDR 422 (493)
Q Consensus 344 gT~~~~~l~~riGl~r~g~~~~~~q~~~L~~~v~~~-~~~~~~~s~~~l~~gi~~SR~GLw~fDl~~~~l~Qe~vp~~~r 422 (493)
|+++.+++.+|.|.. ...++.. +...+.... ....+.+ .+....++..++...+.......+|+..| ++|
T Consensus 257 g~~~~g~l~dr~~~~-~~~~~~~----~~~~~~~~l~~~~~~~~---~~~~~~~l~g~~~~~~~~~~~~~~~~~~~-~~~ 327 (390)
T PRK03545 257 GSVLFSRLGNRHPSG-FLLIAIA----LLLVCLLLLLPAANSEW---HLSVLSIFWGIAIMCIGLAMQVKVLKLAP-DAT 327 (390)
T ss_pred HHHHHHHHhhccchh-HHHHHHH----HHHHHHHHHHHHhchHH---HHHHHHHHHHHHHhcchHHHHHHHHHhCC-CcH
Confidence 999999999999843 3222221 111221111 1111211 11222223333444455666677887766 588
Q ss_pred hhHHHHHHHHHHhh-HHHHHHHHHhccCCCCchHHHHHHHHHHH
Q 011118 423 CVVGGVQNSLQSTM-DLMAYTMGIIISNPQDFWKLILISVIVVT 465 (493)
Q Consensus 423 G~v~gv~~sl~~~f-~l~~~~~~ii~~~p~~F~~l~~~S~~~V~ 465 (493)
|++.|..+++.++- .++..+.+.+...-+............+.
T Consensus 328 ~~~~g~~~~~~~~g~~~G~~~~G~~~~~~g~~~~~~~~~~~~~~ 371 (390)
T PRK03545 328 DVAMALFSGIFNIGIGAGALLGNQVSLHLGLSSIGYVGAALALA 371 (390)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhccChhHHHHHHHHHHHH
Confidence 99999988887655 88999999888665544444444444433
No 23
>PRK10213 nepI ribonucleoside transporter; Reviewed
Probab=99.62 E-value=3.2e-12 Score=134.03 Aligned_cols=333 Identities=12% Similarity=0.050 Sum_probs=197.5
Q ss_pred HHhCCCchHHHHHHHHHHHHHHHhhhccceeeecccchhHHHHHHHHHHHHHHHHHHHHHHHHHhhcccccchhHHHHHH
Q 011118 45 ISVWPDSLLFAAIYGAVESASIALFGPIVGHWVDKLTYVKVLQIWLVTQNLSFIVAGVSVITLLFFSSLKSTNFIAFVLL 124 (493)
Q Consensus 45 v~l~~~sll~~sv~gl~~~l~~llfg~~vG~~vDr~~R~~v~~~~~~~q~~~v~~s~~~~~~~l~~~~~~~~~~~~~~~l 124 (493)
.+-++-|...++....+..+...+.+++.|.+.||.+|||++..+.+...+. +.+ . .. . .+...+
T Consensus 47 ~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~Dr~grr~~~~~~~~~~~~~----~~~--~-~~----~-~~~~~l--- 111 (394)
T PRK10213 47 AQDLGISEGVAGQSVTVTAFVAMFASLFITQTIQATDRRYVVILFAVLLTLS----CLL--V-SF----A-NSFSLL--- 111 (394)
T ss_pred HHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHhcccCcHHHHHHHHHHHHHH----HHH--H-HH----H-ChHHHH---
Confidence 3445667777788777888889999999999999999999999998665443 111 1 11 1 111111
Q ss_pred HHHHHHHHHHHHhhhhhhhhhhccceEEEecCCCChhhhhhhhhHHHhHHHHHHhhhhHHHHHHHHhhhhHHHHHHHHHH
Q 011118 125 VILTNISGAVGVISTLAGTILIEREWVVVISEGHPPEALTKMNSIIRRIDLTCKLLAPAITGFIISFVSLQASAMTLAIW 204 (493)
Q Consensus 125 ~~~~~~~g~~~~l~~~a~~iaieRDWvv~i~~~~~~~~L~~~Na~mrriDl~~~l~gP~~~G~l~~~~s~~~a~~~i~~~ 204 (493)
++.-.+.|.......+.... +-.||+ ++ ++..+.|+.+...-.++.++||.+++.+.+..|.+....+....
T Consensus 112 ~~~r~l~G~~~g~~~~~~~~-~i~~~~----~~---~~~~~a~~~~~~~~~~g~~ig~~l~~~l~~~~gw~~~f~~~~~l 183 (394)
T PRK10213 112 LIGRACLGLALGGFWAMSAS-LTMRLV----PP---RTVPKALSVIFGAVSIALVIAAPLGSFLGELIGWRNVFNAAAVM 183 (394)
T ss_pred HHHHHHHHHhhHHHHHHHHH-HHHHHc----CH---hHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCHHHHHHHHHHH
Confidence 11122334444444433232 335665 33 56889999999999999999999999999988887766433322
Q ss_pred HHHHHHHHHHHHHHHHhhcCcchhhhhhhhccCCCcccccccCCccccccccccccchhHHHHHHHHHHHHhhhcccccc
Q 011118 205 TTVTVWVEYWLFMSVYKGIPALAESSQRRIRRSMPIDMEQSTSMPRERESLLSHDENNAELAEKRWRWKIIDWISNAPCV 284 (493)
Q Consensus 205 n~~S~~ve~~~l~~Vy~~~p~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~ 284 (493)
..+ ++..++...|+.++ +.++ . .
T Consensus 184 ~~~-------~~l~~~~~~p~~~~------------~~~~------------------~---~----------------- 206 (394)
T PRK10213 184 GVL-------CIFWIIKSLPSLPG------------EPSH------------------Q---K----------------- 206 (394)
T ss_pred HHH-------HHHHHHHHCCCCCc------------cccc------------------c---h-----------------
Confidence 222 11122233453210 0000 0 0
Q ss_pred ccceeeecccchHHHHHHHHH-HHHhhhhhh-HHHHHHHHcCCCchHHHHHHHHHHHHHHHHHHHHHHHHhhhchhhhhH
Q 011118 285 GAWQVYLKQEVVLPGVSLALL-FFTVLSFGT-LMTATLEWEGIPAYIIGIARGISATIGIAATILYPILQSRISTLRTGL 362 (493)
Q Consensus 285 ~g~~~y~~q~v~la~~alalL-y~tVL~f~~-l~~~yl~~~gls~~~iG~~r~~~av~GllgT~~~~~l~~riGl~r~g~ 362 (493)
+.++..+++|.++..+...++ +....++.. +.+.|.++.|+++...|.+....+++++.|.++.+++.+|.+ .+...
T Consensus 207 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~g~s~~~~g~~~~~~~~~~iig~~~~~~l~~r~~-~~~l~ 285 (394)
T PRK10213 207 QNTFRLLQRPGVMAGMIAIFMSFAGQFAFFTYIRPVYMNLAGFGVDGLTLVLLSFGIASFVGTSLSSFILKRSV-KLALA 285 (394)
T ss_pred hHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCChhHHHHHHHHHHHHHHHHHHHHHHHHhccc-hhHHH
Confidence 001112356655554433322 222223322 235566678999999999999999999999999999999943 23222
Q ss_pred HHHHHHHHHHHHHHHHHhhcchHHHHHHHHHHHHhhhchhhhhhhhhhhhhhccCCCCcchhHHHHHHHHHHhh-HHHHH
Q 011118 363 WSIWSQWFCLLICVASIWIHNSLVAAYMLMVGVATSRLGLWMFDLSVIQQMQDLVPESDRCVVGGVQNSLQSTM-DLMAY 441 (493)
Q Consensus 363 ~~~~~q~~~L~~~v~~~~~~~~~~s~~~l~~gi~~SR~GLw~fDl~~~~l~Qe~vp~~~rG~v~gv~~sl~~~f-~l~~~ 441 (493)
+.... .....+++..+.+ +.+ .+....++..+|.-.+....++.+|+.+| ++++++++...+..++. .++..
T Consensus 286 ~~~~~--~~~~~~~l~~~~~-~~~---~~~~~~~l~G~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~lg~~~G~~ 358 (394)
T PRK10213 286 GAPLV--LAVSALVLTLWGS-DKI---VATGVAIIWGLTFALVPVGWSTWITRSLA-DQAEKAGSIQVAVIQLANTCGAA 358 (394)
T ss_pred HHHHH--HHHHHHHHHHHhh-hHH---HHHHHHHHHHHHHHhhhHHHHHHHHHHCc-ccHHHHHHHHHHHHHHHHHHHHH
Confidence 22210 0111111212222 111 12223333445556778888889999998 45788888887777766 89999
Q ss_pred HHHHhccCCCCchHHHHHHHHHHH
Q 011118 442 TMGIIISNPQDFWKLILISVIVVT 465 (493)
Q Consensus 442 ~~~ii~~~p~~F~~l~~~S~~~V~ 465 (493)
+.|.+...-+.....+...+..+.
T Consensus 359 l~G~l~~~~g~~~~~~~~~~~~~~ 382 (394)
T PRK10213 359 IGGYALDNIGLTSPLMLSGTLMLL 382 (394)
T ss_pred HHHHHHhccChhhHHHHHHHHHHH
Confidence 999998765444444444333333
No 24
>PRK11102 bicyclomycin/multidrug efflux system; Provisional
Probab=99.62 E-value=1.5e-12 Score=133.93 Aligned_cols=371 Identities=16% Similarity=0.154 Sum_probs=199.1
Q ss_pred HHhhHHHHHHHHHHHHHhCCCchHHHHHHHHHHHHHHHhhhccceeeecccchhHHHHHHHHHHHHHHHHHHHHHHHHHh
Q 011118 30 RWGARMWEFSVGLYMISVWPDSLLFAAIYGAVESASIALFGPIVGHWVDKLTYVKVLQIWLVTQNLSFIVAGVSVITLLF 109 (493)
Q Consensus 30 ~~Gdr~~~Fa~~L~lv~l~~~sll~~sv~gl~~~l~~llfg~~vG~~vDr~~R~~v~~~~~~~q~~~v~~s~~~~~~~l~ 109 (493)
.++..+|.-..|.+..+ ++-|....+.......+...+.+++.|.+.||++||+++..+.+...+.. .. . ..
T Consensus 4 ~~~~~~~~p~~~~~~~~-~~~s~~~~~~~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~~~i~~----~~--~-~~ 75 (377)
T PRK11102 4 PLAIDMYLPALPVIAAD-FGVSAGSVQMTLSAYILGFAIGQLFYGPMADSFGRKPVILGGTLVFALAA----VA--C-AL 75 (377)
T ss_pred chHHHHHhccHHHHHHH-hCCCHHHHHHHHHHHHHHHHHHHHhhchHHhhcCChHHHHHHHHHHHHHH----HH--H-HH
Confidence 45667788888887665 56677888888888889999999999999999999999887764444431 11 1 11
Q ss_pred hcccccchhHHHHHHHHHHHHHHHHHHhhhhhhhhhhccceEEEecCCCChhhhhhhhhHHHhHHHHHHhhhhHHHHHHH
Q 011118 110 FSSLKSTNFIAFVLLVILTNISGAVGVISTLAGTILIEREWVVVISEGHPPEALTKMNSIIRRIDLTCKLLAPAITGFII 189 (493)
Q Consensus 110 ~~~~~~~~~~~~~~l~~~~~~~g~~~~l~~~a~~iaieRDWvv~i~~~~~~~~L~~~Na~mrriDl~~~l~gP~~~G~l~ 189 (493)
. .++..+... ..+.|.......+... +.-.||. ++ ++..+.++........+.+++|.++|.+.
T Consensus 76 ~-----~~~~~~~~~---~~l~g~~~~~~~~~~~-~~~~~~~----~~---~~~~~~~~~~~~~~~~g~~~~~~~~~~l~ 139 (377)
T PRK11102 76 A-----QTIDQLIYM---RFLHGLAAAAASVVIN-ALMRDMF----PK---EEFSRMMSFVTLVMTIAPLLAPIIGGWLL 139 (377)
T ss_pred H-----ccHHHHHHH---HHHHHHHHHHHHHHHH-HHHHHhc----CH---HHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 0 111111111 1223333333333322 2233443 32 56788888888888999999999999998
Q ss_pred HhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCcchhhhhhhhccCCCcccccccCCccccccccccccchhHHHHHH
Q 011118 190 SFVSLQASAMTLAIWTTVTVWVEYWLFMSVYKGIPALAESSQRRIRRSMPIDMEQSTSMPRERESLLSHDENNAELAEKR 269 (493)
Q Consensus 190 ~~~s~~~a~~~i~~~n~~S~~ve~~~l~~Vy~~~p~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 269 (493)
+..+.+...........+..+.- .. ..|+..++ ++ + ++ . + ... .
T Consensus 140 ~~~~~~~~~~~~~~~~~~~~~~~----~~---~~~~~~~~--~~-----~---~~-----~----------~-~~~-~-- 183 (377)
T PRK11102 140 VWFSWHAIFWVLALAAILAAALV----FF---FIPETLPK--ER-----R---QP-----F----------H-LRT-T-- 183 (377)
T ss_pred HHcChHHHHHHHHHHHHHHHHHH----HH---hCCccCcc--cc-----c---CC-----C----------C-hHH-H--
Confidence 87777665543333333332221 11 22321100 00 0 00 0 0 000 0
Q ss_pred HHHHHHhhhccccccccceeeecccchHHHHHHHHHHHH-hhhhhhHHHHHHH-HcCCCchHHHHHHHHHHHHHHHHHHH
Q 011118 270 WRWKIIDWISNAPCVGAWQVYLKQEVVLPGVSLALLFFT-VLSFGTLMTATLE-WEGIPAYIIGIARGISATIGIAATIL 347 (493)
Q Consensus 270 ~~~~~~~~l~~~~~~~g~~~y~~q~v~la~~alalLy~t-VL~f~~l~~~yl~-~~gls~~~iG~~r~~~av~GllgT~~ 347 (493)
.+.++..+++|.++.......+++. ...+-.....|.. ..|+++...|.+.++.+++++.+.++
T Consensus 184 --------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~g~~~~~~~~~~~~~~~~ 249 (377)
T PRK11102 184 --------------IRNFASLFRHKRVLGYMLASGFSFAGMFSFLTAGPFVYIELNGVSPQNFGYYFALNIVFLFVMTII 249 (377)
T ss_pred --------------HHHHHHHHcChHHHHHHHHHHHHHHHHHHHHHcCHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHH
Confidence 1112223445544433333333222 1222222233444 57999999999999999999999999
Q ss_pred HHHHHhhhchhhhhHHHHHHHHHHHHHHHHHHhhcchHHHHHHHHHHHHhhhchhhhhhhhhhhhhhccCCCCcchhHHH
Q 011118 348 YPILQSRISTLRTGLWSIWSQWFCLLICVASIWIHNSLVAAYMLMVGVATSRLGLWMFDLSVIQQMQDLVPESDRCVVGG 427 (493)
Q Consensus 348 ~~~l~~riGl~r~g~~~~~~q~~~L~~~v~~~~~~~~~~s~~~l~~gi~~SR~GLw~fDl~~~~l~Qe~vp~~~rG~v~g 427 (493)
.+++.+|+|..|.-.++...+.++..........+...+. +..+....-.+.-........+.||..| +++|++++
T Consensus 250 ~g~l~~r~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~g~~~~ 325 (377)
T PRK11102 250 NSRFVRRVGALNMLRFGLWIQFIMGIWLVVSALLDLGFWA---LVVGVAAFVGCVSMISSNAMAVILDEFP-HMAGTASS 325 (377)
T ss_pred HHHHHHHhCHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHH---HHHHHHHHHHHHHHhhHHHHHHHhcccc-ccchHHHH
Confidence 9999999998877666655332221111111111111111 1111111111122223334456777766 78999999
Q ss_pred HHHHHHHhhHHHHHHHHHhccCCCCchHHHHHHHHHHHHHHHHHHHHHHHhhc
Q 011118 428 VQNSLQSTMDLMAYTMGIIISNPQDFWKLILISVIVVTLAAILYTFHLYRIRK 480 (493)
Q Consensus 428 v~~sl~~~f~l~~~~~~ii~~~p~~F~~l~~~S~~~V~~~~~l~~~~~~~~Rg 480 (493)
..++..... +..+..++.....+..+......+.......++..+.+|.++
T Consensus 326 ~~~~~~~~~--g~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 376 (377)
T PRK11102 326 LAGTLRFGI--GAIVGALLSLAPFTSAWPMVWSMAFCSILSILFYLYASRPKK 376 (377)
T ss_pred HHHHHHHHH--HHHHHHHHHhccCCChHHHHHHHHHHHHHHHHHHHHhccccc
Confidence 987776544 333444433333333333333333333333444445454443
No 25
>cd06174 MFS The Major Facilitator Superfamily (MFS) is a large and diverse group of secondary transporters that includes uniporters, symporters, and antiporters. MFS proteins facilitate the transport across cytoplasmic or internal membranes of a variety of substrates including ions, sugar phosphates, drugs, neurotransmitters, nucleosides, amino acids, and peptides. They do so using the electrochemical potential of the transported substrates. Uniporters transport a single substrate, while symporters and antiporters transport two substrates in the same or in opposite directions, respectively, across membranes. MFS proteins are typically 400 to 600 amino acids in length, and the majority contain 12 transmembrane alpha helices (TMs) connected by hydrophilic loops. The N- and C-terminal halves of these proteins display weak similarity and may be the result of a gene duplication/fusion event. Based on kinetic studies and the structures of a few bacterial superfamily members, GlpT (glycerol-3
Probab=99.60 E-value=2.7e-12 Score=128.59 Aligned_cols=338 Identities=17% Similarity=0.161 Sum_probs=224.2
Q ss_pred HHHHHHHHHHHHhhHHHHHHHHHHHHHhCCCchHHHHHHHHHHHHHHHhhhccceeeecccchhHHHHHHHHHHHHHHHH
Q 011118 20 TYLYVAHFLARWGARMWEFSVGLYMISVWPDSLLFAAIYGAVESASIALFGPIVGHWVDKLTYVKVLQIWLVTQNLSFIV 99 (493)
Q Consensus 20 ~~L~~s~~lS~~Gdr~~~Fa~~L~lv~l~~~sll~~sv~gl~~~l~~llfg~~vG~~vDr~~R~~v~~~~~~~q~~~v~~ 99 (493)
..+..+.++..+++.++....|.+..+. +.+....+.......+..++.+++.|.+.||.+|||.+..+.+...+....
T Consensus 2 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~g~~~d~~g~r~~~~~~~~~~~~~~~~ 80 (352)
T cd06174 2 LLLFLGFFLSGLDRGLLSPALPLLAEDL-GLSASQAGLIVSAFSLGYALGSLLAGYLSDRFGRRRVLLLGLLLFALGSLL 80 (352)
T ss_pred HHHHHHHHHHHHhhhhhHhhHHHHHHHc-CCCHHHHHHHHHHHHHHHHHHHHhHHHHHHHhCCchhhHHHHHHHHHHHHH
Confidence 4567889999999999999999987664 667788899999999999999999999999999999888887655554211
Q ss_pred HHHHHHHHHhhcccccchhHHHHHHHHHHHHHHHHHHhhhhhhhhhhccceEEEecCCCChhhhhhhhhHHHhHHHHHHh
Q 011118 100 AGVSVITLLFFSSLKSTNFIAFVLLVILTNISGAVGVISTLAGTILIEREWVVVISEGHPPEALTKMNSIIRRIDLTCKL 179 (493)
Q Consensus 100 s~~~~~~~l~~~~~~~~~~~~~~~l~~~~~~~g~~~~l~~~a~~iaieRDWvv~i~~~~~~~~L~~~Na~mrriDl~~~l 179 (493)
. ... .++..+. +...+.|.......+. ..+.-.||. ++ ++..+.++........+..
T Consensus 81 ------~-~~~-----~~~~~~~---~~~~l~g~~~~~~~~~-~~~~~~~~~----~~---~~~~~~~~~~~~~~~~g~~ 137 (352)
T cd06174 81 ------L-AFA-----SSLWLLL---VGRFLLGLGGGALYPA-AAALIAEWF----PP---KERGRALGLFSAGFGLGAL 137 (352)
T ss_pred ------H-HHh-----ccHHHHH---HHHHHHHcccccccHh-HHHHHHHhC----Cc---cchhhhhhHHHHHHHHHHH
Confidence 1 110 1221211 1122334444444444 333344454 33 4678999999999999999
Q ss_pred hhhHHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCcchhhhhhhhccCCCcccccccCCccccccccccc
Q 011118 180 LAPAITGFIISFVSLQASAMTLAIWTTVTVWVEYWLFMSVYKGIPALAESSQRRIRRSMPIDMEQSTSMPRERESLLSHD 259 (493)
Q Consensus 180 ~gP~~~G~l~~~~s~~~a~~~i~~~n~~S~~ve~~~l~~Vy~~~p~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 259 (493)
+||.+++.+.+..+.+....+......++.+.-..+.
T Consensus 138 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------------------------------------------- 174 (352)
T cd06174 138 LGPLLGGLLAESLGWRWLFLILAILGLLLALLLLFLL------------------------------------------- 174 (352)
T ss_pred HHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHH-------------------------------------------
Confidence 9999999999877766555433333333322211110
Q ss_pred cchhHHHHHHHHHHHHhhhccccccccceeeecccchHHHHHHHHHH-HHhhhhhhHHHHHHHHc-CCCchHHHHHHHHH
Q 011118 260 ENNAELAEKRWRWKIIDWISNAPCVGAWQVYLKQEVVLPGVSLALLF-FTVLSFGTLMTATLEWE-GIPAYIIGIARGIS 337 (493)
Q Consensus 260 ~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~y~~q~v~la~~alalLy-~tVL~f~~l~~~yl~~~-gls~~~iG~~r~~~ 337 (493)
|.++.......++ +..-.+...+..|.++. |.++...|.+.+..
T Consensus 175 ----------------------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 220 (352)
T cd06174 175 ----------------------------------RLLLLLALAFFLLSFGYYGLLTYLPLYLQEVLGLSAAEAGLLLSLF 220 (352)
T ss_pred ----------------------------------HHHHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHH
Confidence 1111222222222 22334556677787765 99999999999999
Q ss_pred HHHHHHHHHHHHHHHhhhchhh-hhHHHHHHHHHHHHHHHHHHhhcchHHHHHHHHHHHHhhhchhhhhhhhhhhhhhcc
Q 011118 338 ATIGIAATILYPILQSRISTLR-TGLWSIWSQWFCLLICVASIWIHNSLVAAYMLMVGVATSRLGLWMFDLSVIQQMQDL 416 (493)
Q Consensus 338 av~GllgT~~~~~l~~riGl~r-~g~~~~~~q~~~L~~~v~~~~~~~~~~s~~~l~~gi~~SR~GLw~fDl~~~~l~Qe~ 416 (493)
.++++.+.++.+++.+|+|..+ ...++... +....+...+.+. ...+..+..+..++.-........+.||.
T Consensus 221 ~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~---~~i~~~~~~~~~~----~~~~~~~~~~~g~~~~~~~~~~~~~~~~~ 293 (352)
T cd06174 221 GLGGILGALLGGLLSDRLGRRRLLLLIGLLL---AALGLLLLALAPS----LALLLVALLLLGFGLGFAFPALLTLASEL 293 (352)
T ss_pred HHHHHHHHHHHHHHHHHHHhhhHHHHHHHHH---HHHHHHHHHHhcc----HHHHHHHHHHHHHHHhccchhHHHHHHhh
Confidence 9999999999999999999777 55544431 1111122122221 12223334444455566688999999999
Q ss_pred CCCCcchhHHHHHHHHHHhh-HHHHHHHHHhccCCCCchHHHHHHHHHHH
Q 011118 417 VPESDRCVVGGVQNSLQSTM-DLMAYTMGIIISNPQDFWKLILISVIVVT 465 (493)
Q Consensus 417 vp~~~rG~v~gv~~sl~~~f-~l~~~~~~ii~~~p~~F~~l~~~S~~~V~ 465 (493)
+|+++||+..|+.+..++.. -++..+.+.+.+..+......+.+...+.
T Consensus 294 ~~~~~~~~~~~~~~~~~~~~~~i~~~i~g~l~~~~~~~~~~~~~~~~~~i 343 (352)
T cd06174 294 APPEARGTASGLFNTFGSLGGALGPLLAGLLLDTGGYGGVFLILAALALL 343 (352)
T ss_pred cCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccCcchHHHHHHHHHHH
Confidence 99999999999999999998 77777777877655544444444444443
No 26
>PRK11902 ampG muropeptide transporter; Reviewed
Probab=99.59 E-value=4.4e-12 Score=132.83 Aligned_cols=383 Identities=11% Similarity=0.027 Sum_probs=214.1
Q ss_pred HHHHHHHHHHHHHhhHHHHHHHHHHHHHhCCCchHHHHHHHHHHHHHHHhhhccceeeeccc-----chh-HHHHHHHHH
Q 011118 19 TTYLYVAHFLARWGARMWEFSVGLYMISVWPDSLLFAAIYGAVESASIALFGPIVGHWVDKL-----TYV-KVLQIWLVT 92 (493)
Q Consensus 19 ~~~L~~s~~lS~~Gdr~~~Fa~~L~lv~l~~~sll~~sv~gl~~~l~~llfg~~vG~~vDr~-----~R~-~v~~~~~~~ 92 (493)
+..||..|.+ .-.....++|.++-+. +-|.-..+....+.. + .++.+..|.++||+ +|| +.+..+++.
T Consensus 4 ~~~l~~~~~~---~~~~~~~~~~~~l~~~-g~~~~~ig~~~~~~~-~-~~~~~l~g~~~Dr~~~~~~g~rr~~l~~~~~~ 77 (402)
T PRK11902 4 MLLLGFASGL---PLALTSGTLQAWMTVE-GLDIQTIGFFSLVGQ-A-YIFKFLWAPLMDRYTPPLLGRRRGWLLLTQVG 77 (402)
T ss_pred HHHHHHHHhh---hHHHHHHHHHHHHHHc-CCCHHHHHHHHHHHH-H-HHHHHHHHHHHHcccccCCCcchhHHHHHHHH
Confidence 5566666654 4567788999999876 668888888866554 3 68899999999999 454 577777644
Q ss_pred HHHHHHHHHHHHHHHHhhcccccchhHHHHHHHHHHHHHHHHHHhhhhhhhhhhccceEEEecCCCChhhhhhhhhHHHh
Q 011118 93 QNLSFIVAGVSVITLLFFSSLKSTNFIAFVLLVILTNISGAVGVISTLAGTILIEREWVVVISEGHPPEALTKMNSIIRR 172 (493)
Q Consensus 93 q~~~v~~s~~~~~~~l~~~~~~~~~~~~~~~l~~~~~~~g~~~~l~~~a~~iaieRDWvv~i~~~~~~~~L~~~Na~mrr 172 (493)
-.++.. . +.+.+ ...+...+ +++..+.+......+++.+.. --||+ ++ ++..+.|+....
T Consensus 78 ~~l~~~----~--l~~~~---~~~~~~~l---~~~~~~~~~~~~~~~~~~~al-~~~~~----~~---~~r~~~~~~~~~ 137 (402)
T PRK11902 78 LAASIA----A--MAFCP---PHAALWPL---AGLAVLVAFLSASQDIVFDAY-STDVL----HP---EERGAGAAVKVL 137 (402)
T ss_pred HHHHHH----H--HHhcC---ccchHHHH---HHHHHHHHHHHHHHHHHHHHH-HHHhc----Ch---hhhhHHHHHHHH
Confidence 433311 1 11111 11122111 111122344445455553333 23343 33 567899999887
Q ss_pred HHHHHHhhhhHHHHHHHHh-hhhHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCcchhhhhhhhccCCCcccccccCCccc
Q 011118 173 IDLTCKLLAPAITGFIISF-VSLQASAMTLAIWTTVTVWVEYWLFMSVYKGIPALAESSQRRIRRSMPIDMEQSTSMPRE 251 (493)
Q Consensus 173 iDl~~~l~gP~~~G~l~~~-~s~~~a~~~i~~~n~~S~~ve~~~l~~Vy~~~p~L~~~~~~~~~~~~~~~~~~~~~~~~~ 251 (493)
--..+.++||.+++.+.+. .|.+....+.++.-.+..+ . .. ..||...+ + + ++
T Consensus 138 g~~~g~i~g~~l~~~l~~~~~gw~~~f~i~a~~~l~~~l----~--~~--~~~e~~~~---~-------~-~~------- 191 (402)
T PRK11902 138 GYRLAMLVSGGLALWLADRVLGWGNTYLLMAGLMLAGAL----T--TL--WAPEPEVP---A-------R-PP------- 191 (402)
T ss_pred HHHHHHHHHhHHHHHHHhcccCHHHHHHHHHHHHHHHHH----H--HH--hcCCCccc---c-------c-cc-------
Confidence 7888999999999999885 4776665444443332222 1 11 23432110 0 0 00
Q ss_pred cccccccccchhHHHHHHHHHHHHhhhccccccccceeeecccchHHHHHHHHHHHH-hhhhhhHHHHHHH-HcCCCchH
Q 011118 252 RESLLSHDENNAELAEKRWRWKIIDWISNAPCVGAWQVYLKQEVVLPGVSLALLFFT-VLSFGTLMTATLE-WEGIPAYI 329 (493)
Q Consensus 252 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~y~~q~v~la~~alalLy~t-VL~f~~l~~~yl~-~~gls~~~ 329 (493)
. .. . ++ ..++++..++||.++..+...+++.. ...+....+.|+. +.|+++..
T Consensus 192 ---------~-~~--~----~~---------~~~~~~~l~~~~~~~~~l~~~~l~~~~~~~~~~~~~~~l~~~~G~~~~~ 246 (402)
T PRK11902 192 ---------R-SL--G----EA---------VVGPLRDFFSRRGAWALLLLIVLYKLGDAFAGSLSTTFLIRGAGFSAGE 246 (402)
T ss_pred ---------c-hh--H----HH---------HHHHHHHHHhCcCHHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCHHH
Confidence 0 00 0 00 13455667888988877776666532 2222233444555 58999999
Q ss_pred HHHHHHH-HHHHHHHHHHHHHHHHhhhchhhhhHHHHHHHHHHHHHHHHHHhhcchHHHHH-HHHHHHHhhhchhhhhhh
Q 011118 330 IGIARGI-SATIGIAATILYPILQSRISTLRTGLWSIWSQWFCLLICVASIWIHNSLVAAY-MLMVGVATSRLGLWMFDL 407 (493)
Q Consensus 330 iG~~r~~-~av~GllgT~~~~~l~~riGl~r~g~~~~~~q~~~L~~~v~~~~~~~~~~s~~-~l~~gi~~SR~GLw~fDl 407 (493)
+|.+.+. +.++++.|+++.+++.+|+|..|...++...+.++........+.+.+.+... ..+...+...++......
T Consensus 247 ~g~~~~~~~~~~~i~g~~~~g~l~~r~g~~~~l~~~~~~~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~ 326 (402)
T PRK11902 247 VGIVNKTLGLAATIVGALAGGTLMVRLGLYRSLMLFGVLQAVSNLGYWVLAVTPKHLWTMALAIGIENLCGGMGTAAFVA 326 (402)
T ss_pred HHHHHhHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHhcCCcHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 9999865 56678999999999999999888765555433222211111112222222111 111111344566667788
Q ss_pred hhhhhhhccCCCCcchhHHHHHHHHHHhhHHHHHHHHHhccCCCCchHHHHHHHHHHHHHHHHHHHHHHHhhcCCCChh
Q 011118 408 SVIQQMQDLVPESDRCVVGGVQNSLQSTMDLMAYTMGIIISNPQDFWKLILISVIVVTLAAILYTFHLYRIRKHLFHFD 486 (493)
Q Consensus 408 ~~~~l~Qe~vp~~~rG~v~gv~~sl~~~f~l~~~~~~ii~~~p~~F~~l~~~S~~~V~~~~~l~~~~~~~~Rghl~h~~ 486 (493)
....+.|+..|.++++..+++. ++... .+..+.|.+... +++-.....+++++...+.. .+|.++|+-|.|
T Consensus 327 ~~~~~~~~~~~~~~~~~~~~~~-~l~~~--~~~~~~G~l~~~---~G~~~~f~~~~~~~~~~~~~--~~~~~~~~~~~~ 397 (402)
T PRK11902 327 LLMALCNRSFSATQYALLSALA-SVGRV--YVGPTSGYLVEA---YGWPGFYLMTVVIALPGLAL--LWLMRGTIGRYE 397 (402)
T ss_pred HHHHhcCCCCcHHHHHHHHHHH-HHHHH--HHHHHHHHHHHH---hChHHHHHHHHHHHHHHHHH--HHHHhhhccccc
Confidence 8999999999988776644443 33332 234456666543 44443333333332222111 244556655554
No 27
>TIGR00897 2A0118 polyol permease family. This family of proteins includes the ribitol and D-arabinitol transporters from Klebsiella pneumoniae and the alpha-ketoglutarate permease from Bacillus subtilis.
Probab=99.58 E-value=2.6e-12 Score=134.69 Aligned_cols=368 Identities=12% Similarity=0.058 Sum_probs=209.2
Q ss_pred hhhHHHHHHHHHHHHHhhHHHHHHHHHHHHHhCCCchHHHHHHHHHHHHHHHhhhccceeeecccchhHHHHHHHHHHHH
Q 011118 16 SFLTTYLYVAHFLARWGARMWEFSVGLYMISVWPDSLLFAAIYGAVESASIALFGPIVGHWVDKLTYVKVLQIWLVTQNL 95 (493)
Q Consensus 16 ~~~~~~L~~s~~lS~~Gdr~~~Fa~~L~lv~l~~~sll~~sv~gl~~~l~~llfg~~vG~~vDr~~R~~v~~~~~~~q~~ 95 (493)
+|+....|.+.++..+++-+.....|.++.+ ++-|....+.....-.+...+++++.|++.||++|||++..+.+.-.+
T Consensus 12 ~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~-~g~s~~~~g~~~~~~~~~~~i~~~~~g~l~dr~g~k~~l~~~~~~~~~ 90 (402)
T TIGR00897 12 PLNLLWGYIGVVVFMTGDGLEQGWLSPFLKA-LGLSPQQSASAFTLYGIAAAISAWISGVVAEIIGPLKTMMIGLLLWCV 90 (402)
T ss_pred CchhhHHHHHHHHHHHhhhhHHHhHHHHHHH-hCCCHHHhHHHHHHHHHHHHHHHHHHHHHHHHcCcHHHHHHHHHHHHH
Confidence 4688999999999999999877777777754 566778888888888899999999999999999999999888754433
Q ss_pred HHHHHHHHHHHHHhhcccccchhHHHHHHHHHHHHHHHHHHhhhhhhhhhhccceEEEecCCCChhhhhhhhhHHHhHHH
Q 011118 96 SFIVAGVSVITLLFFSSLKSTNFIAFVLLVILTNISGAVGVISTLAGTILIEREWVVVISEGHPPEALTKMNSIIRRIDL 175 (493)
Q Consensus 96 ~v~~s~~~~~~~l~~~~~~~~~~~~~~~l~~~~~~~g~~~~l~~~a~~iaieRDWvv~i~~~~~~~~L~~~Na~mrriDl 175 (493)
. ..+ ..... ....++..+..+. .+.|.......+... +...||+ ++ ++..+.|+.....-.
T Consensus 91 ~----~~~-~~~~~---~~~~~~~~l~~~~---~i~G~g~~~~~~~~~-~~~~~~~----~~---~~~g~~~g~~~~~~~ 151 (402)
T TIGR00897 91 G----HAA-FIVFG---LGHANYPLILLFY---GIRGLGYPLFAYSFL-VWVVYNT----KQ---DNLSSAVGWFWAVYS 151 (402)
T ss_pred H----HHH-HHHHh---ccCccHHHHHHHH---HHHHcchHHHHhHHH-HHHHHhC----CH---HHHHHHHHHHHHHHH
Confidence 3 111 11011 0111222221222 122222222222222 2223443 22 567889998888777
Q ss_pred HHH-hhhhHHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCcchhhhhhhhccCCCcccccccCCcccccc
Q 011118 176 TCK-LLAPAITGFIISFVSLQASAMTLAIWTTVTVWVEYWLFMSVYKGIPALAESSQRRIRRSMPIDMEQSTSMPRERES 254 (493)
Q Consensus 176 ~~~-l~gP~~~G~l~~~~s~~~a~~~i~~~n~~S~~ve~~~l~~Vy~~~p~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 254 (493)
.+. +.||.++|.+.+..|.....+.... ..... ..+.... .++..+ |++.++ +
T Consensus 152 ~g~~~~g~~~~~~l~~~~g~~~~~~~~~~---~~~~~--~~~~~~~--~~~~~~----------~~~~~~-----~---- 205 (402)
T TIGR00897 152 IGIGVFGSYYSSYAIPAFGEMNTLWSALA---FVLTG--GVIALFS--NKDIFT----------PQHMQT-----R---- 205 (402)
T ss_pred HHHHHHHHHHHHhcccccchHHHHHHHHH---HHHHH--HHHHHhc--cCCCCC----------cccccC-----C----
Confidence 775 6899999998877664322211111 11111 1111111 111000 000000 0
Q ss_pred ccccccchhHHHHHHHHHHHHhhhccccccccceeeecccchHHHHHHHHHH-HHhhhhhhHHHHHHHHcCCCchHHHHH
Q 011118 255 LLSHDENNAELAEKRWRWKIIDWISNAPCVGAWQVYLKQEVVLPGVSLALLF-FTVLSFGTLMTATLEWEGIPAYIIGIA 333 (493)
Q Consensus 255 ~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~y~~q~v~la~~alalLy-~tVL~f~~l~~~yl~~~gls~~~iG~~ 333 (493)
+. . + + ..++++..+++|.++......... ....++...++.|+++.|+++...+.+
T Consensus 206 -----~~--~--~---------~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~g~s~~~~~~~ 262 (402)
T TIGR00897 206 -----EK--F--S---------E-----LGKAATILFTNPNVLLGGMVRIINTIGLFGFAVFLPMFVAELGFSTSEWLQI 262 (402)
T ss_pred -----cc--h--h---------h-----HHHHHHHHHcChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCChhHHHHH
Confidence 00 0 0 0 122344456677666544433332 333455667788988899999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHhhhchhhhhHH-HHHHHHHHHHHHHHHHhh----cchHHH--HHHHHHHHHhhhchhhhhh
Q 011118 334 RGISATIGIAATILYPILQSRISTLRTGLW-SIWSQWFCLLICVASIWI----HNSLVA--AYMLMVGVATSRLGLWMFD 406 (493)
Q Consensus 334 r~~~av~GllgT~~~~~l~~riGl~r~g~~-~~~~q~~~L~~~v~~~~~----~~~~~s--~~~l~~gi~~SR~GLw~fD 406 (493)
.+...++++.|++..+++.+|+|..|.-.+ +.. .+...+....+. ....+. ...++.|+. ...+
T Consensus 263 ~~~~~~~~~ig~~~~g~l~dr~~~~~~~~~~~~l---~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~G~~-----~~~~- 333 (402)
T TIGR00897 263 WGTFFFTNIVFNVIFGIVGDKLGWMNTVRWFGGV---GCGIFTLALYYIPQHFGHSFAVALIIAIALGIF-----LAGY- 333 (402)
T ss_pred HHHHHHHHHHHHHHHHHHHHhhcchhHHHHHHHH---HHHHHHHHHHHHHHccCCcHHHHHHHHHHHHHH-----HHHH-
Confidence 999999999999999999999996554321 111 111111111111 111111 222233332 2222
Q ss_pred hhhhhhhhccCCCCcchhHHHHHHHHHHhh-HHHHHHHHHhccCCCCchHHHHHHHH
Q 011118 407 LSVIQQMQDLVPESDRCVVGGVQNSLQSTM-DLMAYTMGIIISNPQDFWKLILISVI 462 (493)
Q Consensus 407 l~~~~l~Qe~vp~~~rG~v~gv~~sl~~~f-~l~~~~~~ii~~~p~~F~~l~~~S~~ 462 (493)
....+..++. ++++||+..|+.++..++. -++.++.+.+....+-....++.+..
T Consensus 334 ~~~~~~~~~~-~~~~~g~~~g~~~~~~~lg~~~gp~i~g~l~~~~g~~~~~~~~a~~ 389 (402)
T TIGR00897 334 VPLAAVFPTL-APKHKGAAMSVLNLSAGLSAFLAPAIAVLFIGFFGAIGVVWIFAAL 389 (402)
T ss_pred HHHHHHHHhh-CcchhHHHHHHHHHHHHHHHHHHHHHHHHHHhhcchHHHHHHHHHH
Confidence 2334566664 5568999999999888877 67777788877665444443434333
No 28
>TIGR00899 2A0120 sugar efflux transporter. This family of proteins is an efflux system for lactose, glucose, aromatic glucosides and galactosides, cellobiose, maltose, a-methyl glucoside and other sugar compounds. They are found in both gram-negative and gram-postitive bacteria.
Probab=99.58 E-value=9.1e-12 Score=127.52 Aligned_cols=344 Identities=13% Similarity=0.080 Sum_probs=193.7
Q ss_pred HHHHHHHHHhhHHHHHHHHHHHHHhCCCchHHHHHHHHHHHHHHHhhhccceeeecccchhHHHHH-HHHHHHHHHHHHH
Q 011118 23 YVAHFLARWGARMWEFSVGLYMISVWPDSLLFAAIYGAVESASIALFGPIVGHWVDKLTYVKVLQI-WLVTQNLSFIVAG 101 (493)
Q Consensus 23 ~~s~~lS~~Gdr~~~Fa~~L~lv~l~~~sll~~sv~gl~~~l~~llfg~~vG~~vDr~~R~~v~~~-~~~~q~~~v~~s~ 101 (493)
....++...+..++....|+++.+-++-|....+.......+..++.+|+.|.+.||++|||.+.. +.+.- ++++
T Consensus 3 ~~~~~~~~~~~~~~~~~l~~~l~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~Dr~g~r~~~~~~~~~~~----~~~~ 78 (375)
T TIGR00899 3 LLVAFLTGIAGALQFPTLSLFLSEEVRARPAMIGLFYTGSAIVGIAVSQLLATRSDYQGDRKGLILFCCLLA----ALAC 78 (375)
T ss_pred hHHHHHHHHHHHHHhhHHHHHHHcccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCchHHHHHHHHHH----HHHH
Confidence 356788889999999999999888788888888888888888899999999999999988876544 32111 1111
Q ss_pred HHHHHHHhhcccccchhHHHHHHHHHHHHHHHHHHhhhhhhhhhhccceEEEecCCCChhhhhhhhhHHHhHHHHHHhhh
Q 011118 102 VSVITLLFFSSLKSTNFIAFVLLVILTNISGAVGVISTLAGTILIEREWVVVISEGHPPEALTKMNSIIRRIDLTCKLLA 181 (493)
Q Consensus 102 ~~~~~~l~~~~~~~~~~~~~~~l~~~~~~~g~~~~l~~~a~~iaieRDWvv~i~~~~~~~~L~~~Na~mrriDl~~~l~g 181 (493)
. +... . .++..+ ++...+.+.......+. ..++-+||. ++++ ......|+.++.....+.++|
T Consensus 79 ~---~~~~----~-~~~~~l---~~~~~~~g~~~~~~~p~-~~~~~~~~~----~~~~-~~~~~~~~~~~~~~~~g~~ig 141 (375)
T TIGR00899 79 L---LFAW----N-RNYFLL---LVLGVLLSSFASTANPQ-LFALAREHA----DRTG-REAVMFSSVMRAQISLAWVIG 141 (375)
T ss_pred H---HHHh----c-chHHHH---HHHHHHHHhhhhhhHHH-HHHHHHHHh----hhcc-hhhHHHHHHHHHHHhHHHHHh
Confidence 1 1111 1 122111 11111223233333333 223345554 2211 122233777887788999999
Q ss_pred hHHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCcchhhhhhhhccCCCcccccccCCccccccccccccc
Q 011118 182 PAITGFIISFVSLQASAMTLAIWTTVTVWVEYWLFMSVYKGIPALAESSQRRIRRSMPIDMEQSTSMPRERESLLSHDEN 261 (493)
Q Consensus 182 P~~~G~l~~~~s~~~a~~~i~~~n~~S~~ve~~~l~~Vy~~~p~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 261 (493)
|.++|.+.+..|.+....+ +++..++-..+.... .|+.+++ + +++ ++ +
T Consensus 142 ~~~~~~l~~~~~~~~~f~~----~~~~~~~~~~~~~~~---~~~~~~~---~-----~~~-~~-----~----------- 189 (375)
T TIGR00899 142 PPLAFWLALGFGFTVMFLT----AALAFVLCGVLVWLF---LPSYPRG---A-----PGA-LT-----R----------- 189 (375)
T ss_pred hhHHHHHHHhcccHHHHHH----HHHHHHHHHHHHHHh---CCCcccC---c-----ccc-cC-----c-----------
Confidence 9999999988887766533 333222222222222 3432110 0 000 00 0
Q ss_pred hhHHHHHHHHHHHHhhhccccccccceeeecccchHHHHHHHHH-HHHhhhhhhHHHHHHH-HcCCCchHHHHHHHHHHH
Q 011118 262 NAELAEKRWRWKIIDWISNAPCVGAWQVYLKQEVVLPGVSLALL-FFTVLSFGTLMTATLE-WEGIPAYIIGIARGISAT 339 (493)
Q Consensus 262 ~~~~~~~~~~~~~~~~l~~~~~~~g~~~y~~q~v~la~~alalL-y~tVL~f~~l~~~yl~-~~gls~~~iG~~r~~~av 339 (493)
. + ++..+++|.++..+...++ +...-.+...+..|+. +.|.++...|.+.+....
T Consensus 190 -~---~-------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~g~~~~~~~~ 246 (375)
T TIGR00899 190 -L---E-------------------VRGLLASRDTRLLFVACTLMWGCNILYIINMPLLIIHELGLPDKLAGLMMGTAAG 246 (375)
T ss_pred -c---h-------------------hhhhhcCcchHHHHHHHHHHHHHHHHHHhhhHHHHHHHcCCCHHHHHHHHHHHHH
Confidence 0 0 0001233334333332222 2212223445566776 589999999999998888
Q ss_pred HHHHHHHHHHHHHhhhchhhhhHHHHHHHHHHHHHHHHHHhhcchHHHHHHHHHHHHhhhchhhhhhhhhhhhhhccCCC
Q 011118 340 IGIAATILYPILQSRISTLRTGLWSIWSQWFCLLICVASIWIHNSLVAAYMLMVGVATSRLGLWMFDLSVIQQMQDLVPE 419 (493)
Q Consensus 340 ~GllgT~~~~~l~~riGl~r~g~~~~~~q~~~L~~~v~~~~~~~~~~s~~~l~~gi~~SR~GLw~fDl~~~~l~Qe~vp~ 419 (493)
.++.+..+.+++.+|+|..|...++... +..........+ +.+... ...++..++.-........+.||..|+
T Consensus 247 ~~~~~~~~~g~l~~r~g~~~~~~~~~~~---~~~~~~~~~~~~-~~~~~~---~~~~~~g~~~g~~~~~~~~~~~~~~~~ 319 (375)
T TIGR00899 247 LEIPFMLLAGYLIKRFGKRRLMLLAALA---GVAFYTGLAADN-SLWALL---MLQLLNAIFIGILAGIGMLYFQDLMPG 319 (375)
T ss_pred HHHHHHHhHHHHHHHhcchhHHHHHHHH---HHHHHHHHHHHH-HHHHHH---HHHHHHHHHHHHHHHHHHHHHHHhCcc
Confidence 8899999999999999977765544331 111111111122 222111 111111222222234555678888876
Q ss_pred CcchhHHHHHHHHHHhh-HHHHHHHHHhccCC
Q 011118 420 SDRCVVGGVQNSLQSTM-DLMAYTMGIIISNP 450 (493)
Q Consensus 420 ~~rG~v~gv~~sl~~~f-~l~~~~~~ii~~~p 450 (493)
++|+.+|..++..++. -++..+.+.+...-
T Consensus 320 -~~~~~~~~~~~~~~~g~~~g~~~~g~~~~~~ 350 (375)
T TIGR00899 320 -RAGAATTLYTNTGRVGWIIAGSVGGILAERW 350 (375)
T ss_pred -hhhHHHHHHHHHHHHHHHHHHHHHHHHHHhc
Confidence 5679999988887766 66777777776543
No 29
>PRK11043 putative transporter; Provisional
Probab=99.58 E-value=2.3e-11 Score=126.82 Aligned_cols=349 Identities=15% Similarity=0.084 Sum_probs=197.0
Q ss_pred HHHHHHHHHHHHHhhHHHHHHHHHH--HHHhCCCchHHHHHHHHHHHHHHHhhhccceeeecccchhHHHHHHHHHHHHH
Q 011118 19 TTYLYVAHFLARWGARMWEFSVGLY--MISVWPDSLLFAAIYGAVESASIALFGPIVGHWVDKLTYVKVLQIWLVTQNLS 96 (493)
Q Consensus 19 ~~~L~~s~~lS~~Gdr~~~Fa~~L~--lv~l~~~sll~~sv~gl~~~l~~llfg~~vG~~vDr~~R~~v~~~~~~~q~~~ 96 (493)
.+.+.....++..+.-.++...|.+ +.+-+.-|....+....+-.++..+.+++.|.+.||++||+++..+.+.-.+.
T Consensus 5 ~~~~~~~~~~~~~~~~~~~~~~p~~~~i~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~ 84 (401)
T PRK11043 5 KGFLVYLAGLSMLGFLATDMYLPAFKAIQADLQTSASAVSASLSLFLAGFALGQLLWGPLSDRYGRKPVLLAGLSLFALG 84 (401)
T ss_pred hhHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHhhhhHHhhcCCcHHHHHHHHHHHHH
Confidence 3344455555666666777777765 44555668888899998899999999999999999999999987776433222
Q ss_pred HHHHHHHHHHHHhhcccccchhHHHHHHHHHHHHHHHHHHhhhhhhhhhhccceEEEecCCCChhhhhhhhhHHHhHHHH
Q 011118 97 FIVAGVSVITLLFFSSLKSTNFIAFVLLVILTNISGAVGVISTLAGTILIEREWVVVISEGHPPEALTKMNSIIRRIDLT 176 (493)
Q Consensus 97 v~~s~~~~~~~l~~~~~~~~~~~~~~~l~~~~~~~g~~~~l~~~a~~iaieRDWvv~i~~~~~~~~L~~~Na~mrriDl~ 176 (493)
+.+ . .. . .++..+.... .+.|.......+. ..+...||. ++ ++..+.++....+-..
T Consensus 85 ----~~~--~-~~----~-~~~~~l~~~~---~l~G~~~~~~~~~-~~~~~~~~~----~~---~~~~~~~~~~~~~~~~ 141 (401)
T PRK11043 85 ----SLG--M-LW----V-ESAAQLLVLR---FVQAVGVCSAAVI-WQALVIDRY----PA---QKANRVFATIMPLVAL 141 (401)
T ss_pred ----HHH--H-HH----h-cCHHHHHHHH---HHHHhhhHHHHHH-HHHHHHHhc----Cc---HHHHHHHHHHHHHHHH
Confidence 111 1 11 0 1221211111 1222222222222 233445665 22 4567777788788888
Q ss_pred HHhhhhHHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCcchhhhhhhhccCCCcccccccCCcccccccc
Q 011118 177 CKLLAPAITGFIISFVSLQASAMTLAIWTTVTVWVEYWLFMSVYKGIPALAESSQRRIRRSMPIDMEQSTSMPRERESLL 256 (493)
Q Consensus 177 ~~l~gP~~~G~l~~~~s~~~a~~~i~~~n~~S~~ve~~~l~~Vy~~~p~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 256 (493)
+..+||.++|.+.+..|.+.......+...+..+. .. ..|+..+ ++ ++
T Consensus 142 ~~~~g~~i~~~l~~~~g~~~~~~~~~~~~~~~~~~----~~----~~~~~~~---~~---------~~------------ 189 (401)
T PRK11043 142 SPALAPLLGAWLLNHFGWQAIFATLFAITLLLILP----TL----RLKPSKK---AR---------KQ------------ 189 (401)
T ss_pred HHHHHHHHHHHHHhcCChHHHHHHHHHHHHHHHHH----HH----HcCCCCC---cc---------cc------------
Confidence 99999999999998888776655444444443322 11 1221000 00 00
Q ss_pred ccccchhHHHHHHHHHHHHhhhccccccccceeeecccchHHHHHH-HHHHHHhhhhhhHHHHHHHHcCCCchHHHHHHH
Q 011118 257 SHDENNAELAEKRWRWKIIDWISNAPCVGAWQVYLKQEVVLPGVSL-ALLFFTVLSFGTLMTATLEWEGIPAYIIGIARG 335 (493)
Q Consensus 257 ~~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~y~~q~v~la~~al-alLy~tVL~f~~l~~~yl~~~gls~~~iG~~r~ 335 (493)
+ + + +++++..+++|.++..+.. .........+......|+++.|+++...|....
T Consensus 190 ----~--~--~----------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~g~s~~~~g~~~~ 245 (401)
T PRK11043 190 ----S--Q--D----------------ALTFKQLLKSKTYLGNVLIFAACSAAFFAWLTGSPFILEQMGYSPADIGLSYV 245 (401)
T ss_pred ----c--h--H----------------HHHHHHHHcChhHHHHHHHHHHHHHHHHHHHHHhHHHHHHcCCCHHHHHHHHH
Confidence 0 0 0 0111122334433322211 111111223444556677778999999999888
Q ss_pred HHHHHHHHHHHHHHHHHhhhchhhhhHHHHHHHHHHHHHHHHHHhh-cchHHHHHHHHHHHHhhhchhhhhhhhhhhhhh
Q 011118 336 ISATIGIAATILYPILQSRISTLRTGLWSIWSQWFCLLICVASIWI-HNSLVAAYMLMVGVATSRLGLWMFDLSVIQQMQ 414 (493)
Q Consensus 336 ~~av~GllgT~~~~~l~~riGl~r~g~~~~~~q~~~L~~~v~~~~~-~~~~~s~~~l~~gi~~SR~GLw~fDl~~~~l~Q 414 (493)
..+++.+.|.++.+++.+|+|..|.-.+......++.......... +...+... .+....-++....-........
T Consensus 246 ~~~~~~~~g~~~~~~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~ 322 (401)
T PRK11043 246 PQTIAFLVGGYGCRAALQKWGGEQLLPWLLVLFAVSVIAIWLASLLSHPSLVPLL---IPFCVMAAANGAIYPIVVAQAL 322 (401)
T ss_pred HHHHHHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHHHHhccCcHHHHH---HHHHHHHHHHHHHHHHHHHHHh
Confidence 8888999999999999999997765544443222222221111111 11222111 1111112233333344444444
Q ss_pred ccCCCCcchhHHHHHHHHHHhh-HHHHHHHHHhccCC
Q 011118 415 DLVPESDRCVVGGVQNSLQSTM-DLMAYTMGIIISNP 450 (493)
Q Consensus 415 e~vp~~~rG~v~gv~~sl~~~f-~l~~~~~~ii~~~p 450 (493)
+..| +++|++.|+.++++.+. ..+.++.+.+....
T Consensus 323 ~~~~-~~~g~~~g~~~~~~~~~~~~~~~~~g~l~~~~ 358 (401)
T PRK11043 323 RPFP-QATGKAAALQNTLQLGLCFLASLLVSALISTP 358 (401)
T ss_pred hhCc-ccChHHHHHHHHHHHHHHHHHHHHHHHccCCC
Confidence 4455 47999999999999887 88888888776543
No 30
>PRK11128 putative 3-phenylpropionic acid transporter; Provisional
Probab=99.57 E-value=6.8e-12 Score=130.46 Aligned_cols=349 Identities=13% Similarity=0.064 Sum_probs=207.3
Q ss_pred chhhHHHHHHHHHHHHHhhHHHHHHHHHHHHHhCCCchHHHHHHHHHHHHHHHhhhccceeeecccchhHHHH-HHHHHH
Q 011118 15 TSFLTTYLYVAHFLARWGARMWEFSVGLYMISVWPDSLLFAAIYGAVESASIALFGPIVGHWVDKLTYVKVLQ-IWLVTQ 93 (493)
Q Consensus 15 ~~~~~~~L~~s~~lS~~Gdr~~~Fa~~L~lv~l~~~sll~~sv~gl~~~l~~llfg~~vG~~vDr~~R~~v~~-~~~~~q 93 (493)
|.+.+...|.+.+++ -.+..=.+|+++.+ +..|...++..-.+-.+..++.++..|.++||.+|++..+ ...
T Consensus 5 ~~~~~~~~~~~~~~~---~g~~~p~l~~~l~~-~g~s~~~iG~~~~~~~l~~~l~~~~~g~l~dr~g~~~~~~~~~~--- 77 (382)
T PRK11128 5 PTRWLALSYFGYFFA---YGVFLPFWSVWLKG-QGYTPETIGLLLGAGLVARFLGSLLIAPRVKDPSQLIPALRLLA--- 77 (382)
T ss_pred ccHHHHHHHHHHHHH---HHHHhhhHHHHHHh-cCCCHHHHHHHHHHHHHHHHhhhHHHHHHHhhhcchHHHHHHHH---
Confidence 344556566666543 34555556677755 5778999999999999999999999999999998853322 111
Q ss_pred HHHHHHHHHHHHHHHhhcccccchhHHHHHHHHHHHHHHHHHHhhhhhhhhhhccceEEEecCCCChhhhhhhhhHHHhH
Q 011118 94 NLSFIVAGVSVITLLFFSSLKSTNFIAFVLLVILTNISGAVGVISTLAGTILIEREWVVVISEGHPPEALTKMNSIIRRI 173 (493)
Q Consensus 94 ~~~v~~s~~~~~~~l~~~~~~~~~~~~~~~l~~~~~~~g~~~~l~~~a~~iaieRDWvv~i~~~~~~~~L~~~Na~mrri 173 (493)
... ++..+..... ...-|..+. ...+.+.......++.... -.||. ++..+.+++.|-.
T Consensus 78 ~~~----~~~~~~~~~~---~~~~~~l~i----~~~l~g~~~~~~~~~~~a~-~~~~~---------~~~~~a~~~~~~~ 136 (382)
T PRK11128 78 LLT----LLFAVAFWFG---AHSFWLLFV----AIGLFNLFFSPLVPLTDAL-ANTWQ---------KQIGLDYGKVRLW 136 (382)
T ss_pred HHH----HHHHHHHHHh---cccHHHHHH----HHHHHHHHHcccccHHHHH-HHHHH---------hhccCCcchHHHH
Confidence 111 1110111111 112222221 1122343343344443333 33562 2345667777777
Q ss_pred HHHHHhhhhHHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCcchhhhhhhhccCCCcccccccCCccccc
Q 011118 174 DLTCKLLAPAITGFIISFVSLQASAMTLAIWTTVTVWVEYWLFMSVYKGIPALAESSQRRIRRSMPIDMEQSTSMPRERE 253 (493)
Q Consensus 174 Dl~~~l~gP~~~G~l~~~~s~~~a~~~i~~~n~~S~~ve~~~l~~Vy~~~p~L~~~~~~~~~~~~~~~~~~~~~~~~~~~ 253 (493)
......+||.++|.+.+..|.+....+.+ +....-.+++ + ..|+.. |.+.++ +
T Consensus 137 ~~lg~~igp~lgg~l~~~~g~~~~f~~~~----~~~~~~~~~~--~--~~~~~~-----------~~~~~~-----~--- 189 (382)
T PRK11128 137 GSIAFVIGSALTGKLVSWFGEQAILWILT----AGVASMLLGQ--L--LRPTIM-----------PQGESR-----Q--- 189 (382)
T ss_pred HHHHHHHHHHHHHHHHHHcChhHHHHHHH----HHHHHHHHHH--H--ccCCCC-----------Cccccc-----c---
Confidence 78999999999999999889876553322 2222211111 1 223211 000000 0
Q ss_pred cccccccchhHHHHHHHHHHHHhhhccccccccceeeecccchHHHHHHHHHHH-HhhhhhhHHHHHHHHcCCCchHHHH
Q 011118 254 SLLSHDENNAELAEKRWRWKIIDWISNAPCVGAWQVYLKQEVVLPGVSLALLFF-TVLSFGTLMTATLEWEGIPAYIIGI 332 (493)
Q Consensus 254 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~y~~q~v~la~~alalLy~-tVL~f~~l~~~yl~~~gls~~~iG~ 332 (493)
+ . . + ..++++..+++|.++..+...+++. ...++.+.+..|+.+.|+++..+|.
T Consensus 190 -------~--~--~---------~-----~~~~~~~i~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~g~s~~~~g~ 244 (382)
T PRK11128 190 -------Q--E--S---------A-----GWPAWKALLKEPTVWRFLLCVSLLQGSHAAYYGFSAIYWQAAGYSASTIGY 244 (382)
T ss_pred -------c--c--c---------c-----ccchHHHHHcChhHHHHHHHHHHHHHHhHhHHHHHHHHHHHCCCCHhHHHH
Confidence 0 0 0 0 1234555677888777666555553 3334666777899889999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHhhhchhhhhHHHHHHHHHHHHHHHHH-HhhcchHHHHHHHHHHHHhhhchhhhhhhhhhh
Q 011118 333 ARGISATIGIAATILYPILQSRISTLRTGLWSIWSQWFCLLICVAS-IWIHNSLVAAYMLMVGVATSRLGLWMFDLSVIQ 411 (493)
Q Consensus 333 ~r~~~av~GllgT~~~~~l~~riGl~r~g~~~~~~q~~~L~~~v~~-~~~~~~~~s~~~l~~gi~~SR~GLw~fDl~~~~ 411 (493)
+.+.+.++++.+.+..+++.+|.|..+.-..+.. +...+... .+.+++ + .+....++..++.-.+.....+
T Consensus 245 ~~~~~~~~~~~~~~~~g~l~~r~~~~~~l~~~~~----~~~~~~~~~~~~~~~-~---~~~~~~~l~g~~~~~~~~~~~~ 316 (382)
T PRK11128 245 LWSLGVVAEVLIFAFSNRLFRRWSARDLLLLSAI----CGVVRWGLMGSTTAL-P---WLIVIQILHCGTFTVCHLAAMR 316 (382)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHH----HHHHHHHHHHhhhhH-H---HHHHHHHHHHHHHHHHHHHHHH
Confidence 9999999999999999999999998877554443 22222111 122211 1 1222333333443445778888
Q ss_pred hhhccCCCCcchhHHHHHHHHHHhh--HHHHHHHHHhccCCCC
Q 011118 412 QMQDLVPESDRCVVGGVQNSLQSTM--DLMAYTMGIIISNPQD 452 (493)
Q Consensus 412 l~Qe~vp~~~rG~v~gv~~sl~~~f--~l~~~~~~ii~~~p~~ 452 (493)
+.|+. |++++|+..+..+++++.. .++..+.|.+.+.-+.
T Consensus 317 ~~~~~-~~~~~~~~~~~~~~~~~~~g~~ig~~i~G~l~~~~g~ 358 (382)
T PRK11128 317 YIAAR-PGSEVIRLQALYSALAMGGSIAIMTVLSGFLYQHLGA 358 (382)
T ss_pred HHHHC-CHhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccH
Confidence 88886 6777899999887776555 6888999988866543
No 31
>TIGR00710 efflux_Bcr_CflA drug resistance transporter, Bcr/CflA subfamily. This subfamily of drug efflux proteins, a part of the major faciliator family, is predicted to have 12 membrane-spanning regions. Members with known activity include Bcr (bicyclomycin resistance protein) in E. coli, Flor (chloramphenicol and florfenicol resistance) in Salmonella typhimurium DT104, and CmlA (chloramphenicol resistance) in Pseudomonas sp. plasmid R1033.
Probab=99.57 E-value=1.6e-11 Score=126.02 Aligned_cols=350 Identities=13% Similarity=0.094 Sum_probs=201.5
Q ss_pred hHHHHHHHHHHHHHhhHHHHHHHHHHHHHhCCCchHHHHHHHHHHHHHHHhhhccceeeecccchhHHHHHHHHHHHHHH
Q 011118 18 LTTYLYVAHFLARWGARMWEFSVGLYMISVWPDSLLFAAIYGAVESASIALFGPIVGHWVDKLTYVKVLQIWLVTQNLSF 97 (493)
Q Consensus 18 ~~~~L~~s~~lS~~Gdr~~~Fa~~L~lv~l~~~sll~~sv~gl~~~l~~llfg~~vG~~vDr~~R~~v~~~~~~~q~~~v 97 (493)
....+...-++..++..+..-+.|.+..+ ++.|....+.......+..++.++..|.+.||++||+++..+.+.-.+.
T Consensus 6 ~~~~~~~~~~~~~~~~~~~~~~~p~~~~~-~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~d~~g~r~~~~~~~~~~~~~- 83 (385)
T TIGR00710 6 FALLLGCLSILGPLGIDMYLPAFPEIAAD-LSTPASIVQMTLTLYLLGFAAGQLLWGPLSDRYGRRPVLLLGLFIFALS- 83 (385)
T ss_pred HHHHHHHHHHHHHHHHHHhcccHHHHHHH-hCCCHHHHHHHHHHHHHHHHHHHHhhhhHHHhcCChHHHHHHHHHHHHH-
Confidence 34444455566778888888888886544 5667778888888888999999999999999999999988765333222
Q ss_pred HHHHHHHHHHHhhcccccchhHHHHHHHHHHHHHHHHHHhhhhhhhhhhccceEEEecCCCChhhhhhhhhHHHhHHHHH
Q 011118 98 IVAGVSVITLLFFSSLKSTNFIAFVLLVILTNISGAVGVISTLAGTILIEREWVVVISEGHPPEALTKMNSIIRRIDLTC 177 (493)
Q Consensus 98 ~~s~~~~~~~l~~~~~~~~~~~~~~~l~~~~~~~g~~~~l~~~a~~iaieRDWvv~i~~~~~~~~L~~~Na~mrriDl~~ 177 (493)
+. .... . .++..+... ..+.|.......++.. ++-.||. ++ ++..+.++.........
T Consensus 84 ---~~---~~~~----~-~~~~~~~~~---~~l~g~~~~~~~~~~~-~~~~~~~----~~---~~~~~~~~~~~~~~~~g 141 (385)
T TIGR00710 84 ---SL---GLAL----S-NNIETLLVL---RFVQAFGASAGSVISQ-ALVRDIY----PG---EELSRIYSILMPVLALA 141 (385)
T ss_pred ---HH---HHHH----H-ccHHHHHHH---HHHHHcchhHHHHHHH-HHHHHhc----Cc---HHHHHHHHHHHHHHHHH
Confidence 11 1111 0 112121111 1223434444444422 3335565 22 56789999999999999
Q ss_pred HhhhhHHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCcchhhhhhhhccCCCcccccccCCccccccccc
Q 011118 178 KLLAPAITGFIISFVSLQASAMTLAIWTTVTVWVEYWLFMSVYKGIPALAESSQRRIRRSMPIDMEQSTSMPRERESLLS 257 (493)
Q Consensus 178 ~l~gP~~~G~l~~~~s~~~a~~~i~~~n~~S~~ve~~~l~~Vy~~~p~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 257 (493)
..+||.++|.+.+..+.+....+..+.-.+..+. .. ...|+.+++ +.++
T Consensus 142 ~~~g~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~----~~---~~~~~~~~~-----------~~~~------------- 190 (385)
T TIGR00710 142 PAVAPLLGGYILVWLSWHAIFAFLSLAGILLSAL----IF---FILPETLPY-----------EARI------------- 190 (385)
T ss_pred HHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHH----HH---HhCCCCCCC-----------cccC-------------
Confidence 9999999999998888776654333333332221 11 123321100 0000
Q ss_pred cccchhHHHHHHHHHHHHhhhccccccccceeeecccchHHHHHHH-HHHHHhhhhhhHHHHHHH-HcCCCchHHHHHHH
Q 011118 258 HDENNAELAEKRWRWKIIDWISNAPCVGAWQVYLKQEVVLPGVSLA-LLFFTVLSFGTLMTATLE-WEGIPAYIIGIARG 335 (493)
Q Consensus 258 ~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~y~~q~v~la~~ala-lLy~tVL~f~~l~~~yl~-~~gls~~~iG~~r~ 335 (493)
. .++. .+.++..+++|.++...... +.+.....+......|+. ..|+++...|.+.+
T Consensus 191 ---~--~~~~----------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~g~~~~ 249 (385)
T TIGR00710 191 ---Q--ISTY----------------FETFLLLLKSKMFWGYALIYGASFGGFFAFFSGAPFVYIDIMGVSPSVFGLLFA 249 (385)
T ss_pred ---C--HHHH----------------HHHHHHHHcCchhHHHHHHHHHHHHHHHHHHHcChHHHHHHcCCCHHHHHHHHH
Confidence 0 0000 01112223445444333322 222223334444455666 58999999999999
Q ss_pred HHHHHHHHHHHHHHHHHhhhchhhhhHHHHHHHHHHHHHHHHHHhhcchHHHHHHHHHHHHhhhchhhhhhhhhhhhhhc
Q 011118 336 ISATIGIAATILYPILQSRISTLRTGLWSIWSQWFCLLICVASIWIHNSLVAAYMLMVGVATSRLGLWMFDLSVIQQMQD 415 (493)
Q Consensus 336 ~~av~GllgT~~~~~l~~riGl~r~g~~~~~~q~~~L~~~v~~~~~~~~~~s~~~l~~gi~~SR~GLw~fDl~~~~l~Qe 415 (493)
...++++.|.++.+++.+|+|..|.-.++.....+...........+.+. ...+........+|....-........|
T Consensus 250 ~~~~~~~~~~~~~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~g~~~~~~~~~~~~~~~~ 327 (385)
T TIGR00710 250 LNIIAMIFGGFLNGRFIKKWGAKSLLRMGLILFAVSAVLLEITAILGLGS--WAMIIGPMMFVGIGNSMISSIAMAYALE 327 (385)
T ss_pred HHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHhccch--HHHHHHHHHHHHHHHHHHHHHHHHHHhc
Confidence 99999999999999999999987766554432221111111111111111 1122222223334444344445555556
Q ss_pred cCCCCcchhHHHHHHHHHHhh-HHHHHHHHHh
Q 011118 416 LVPESDRCVVGGVQNSLQSTM-DLMAYTMGII 446 (493)
Q Consensus 416 ~vp~~~rG~v~gv~~sl~~~f-~l~~~~~~ii 446 (493)
..| +++|+++++.++.++.. .+.....+..
T Consensus 328 ~~~-~~~g~~~~~~~~~~~~~g~i~~~~~~~~ 358 (385)
T TIGR00710 328 DFP-HVAGTASALFGTLRLVLGAIVGYLVSLI 358 (385)
T ss_pred cCc-ccchHHHHHHHHHHHHHHHHHHHHHHhc
Confidence 555 67999999999988776 6666666644
No 32
>PRK10091 MFS transport protein AraJ; Provisional
Probab=99.56 E-value=1.3e-11 Score=128.33 Aligned_cols=375 Identities=11% Similarity=0.066 Sum_probs=216.4
Q ss_pred hhHHHHHHHHHHHHHhhHHHHHHHHHHHHHhCCCchHHHHHHHHHHHHHHHhhhccceeeecccchhHHHHHHHHHHHHH
Q 011118 17 FLTTYLYVAHFLARWGARMWEFSVGLYMISVWPDSLLFAAIYGAVESASIALFGPIVGHWVDKLTYVKVLQIWLVTQNLS 96 (493)
Q Consensus 17 ~~~~~L~~s~~lS~~Gdr~~~Fa~~L~lv~l~~~sll~~sv~gl~~~l~~llfg~~vG~~vDr~~R~~v~~~~~~~q~~~ 96 (493)
+.+..+..+.++...++.+..-.+|.+..+ ++-|.-..+.......+..++..+..|.+.||.+||+++..+.+...+.
T Consensus 3 ~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~-~g~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~ 81 (382)
T PRK10091 3 KVILSLALGTFGLGMAEFGIMGVLTELAHD-VGISIPAAGHMISYYALGVVVGAPIIALFSSRYSLKHILLFLVALCVIG 81 (382)
T ss_pred chHHHHHHHHHHHHhhHHHHHhChHHHHHH-cCCCHHHHhHHHHHHHHHHHHHHHHHHHHHccCccHHHHHHHHHHHHHH
Confidence 467778888888888888888888886554 4556677888888889999999999999999999999998887554433
Q ss_pred HHHHHHHHHHHHhhcccccchhHHHHHHHHHHHHHHHHHHhhhhhhhhhhccceEEEecCCCChhhhhhhhhHHHhHHHH
Q 011118 97 FIVAGVSVITLLFFSSLKSTNFIAFVLLVILTNISGAVGVISTLAGTILIEREWVVVISEGHPPEALTKMNSIIRRIDLT 176 (493)
Q Consensus 97 v~~s~~~~~~~l~~~~~~~~~~~~~~~l~~~~~~~g~~~~l~~~a~~iaieRDWvv~i~~~~~~~~L~~~Na~mrriDl~ 176 (493)
.. ++.. ...-+..+..- .+.|.......+.... +-.||. ++ ++..+.++.+...-.+
T Consensus 82 ~~-------l~~~----~~~~~~l~~~r----~l~G~~~~~~~~~~~~-~~~~~~----~~---~~~~~~~~~~~~~~~~ 138 (382)
T PRK10091 82 NA-------MFTL----SSSYLMLAIGR----LVSGFPHGAFFGVGAI-VLSKII----KP---GKVTAAVAGMVSGMTV 138 (382)
T ss_pred HH-------HHHH----hCcHHHHHHHH----HHHHhhhHHHHHHHHH-HHHHhC----Ch---HHhhHHHHHHHHHHHH
Confidence 11 1111 11112222111 1233333332223222 233554 32 4566778887777788
Q ss_pred HHhhhhHHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCcchhhhhhhhccCCCcccccccCCcccccccc
Q 011118 177 CKLLAPAITGFIISFVSLQASAMTLAIWTTVTVWVEYWLFMSVYKGIPALAESSQRRIRRSMPIDMEQSTSMPRERESLL 256 (493)
Q Consensus 177 ~~l~gP~~~G~l~~~~s~~~a~~~i~~~n~~S~~ve~~~l~~Vy~~~p~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 256 (493)
...+||.++|.+.+..|.+.+.........+..+. .+...|+.+++ + +.
T Consensus 139 g~~~g~~l~~~l~~~~gwr~~f~~~~~~~~~~~~~-------~~~~lp~~~~~---------~---~~------------ 187 (382)
T PRK10091 139 ANLLGIPLGTYLSQEFSWRYTFLLIAVFNIAVLAS-------IYFWVPDIRDE---------A---KG------------ 187 (382)
T ss_pred HHHHhccHHHHHhhhccHHHHHHHHHHHHHHHHHH-------HHHhCCCCCcc---------c---cc------------
Confidence 88999999999988888877765444444433321 12234542200 0 00
Q ss_pred ccccchhHHHHHHHHHHHHhhhccccccccceeeecccchHHHHHHHHH-HHHhhhhhhHHHHHHH-HcCCCchHHHHHH
Q 011118 257 SHDENNAELAEKRWRWKIIDWISNAPCVGAWQVYLKQEVVLPGVSLALL-FFTVLSFGTLMTATLE-WEGIPAYIIGIAR 334 (493)
Q Consensus 257 ~~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~y~~q~v~la~~alalL-y~tVL~f~~l~~~yl~-~~gls~~~iG~~r 334 (493)
.. .+. ++ .+++|.++..+....+ +.....+.+....|.. ..|+++...|.+.
T Consensus 188 ------~~--~~~-----------------~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~~~~~ 241 (382)
T PRK10091 188 ------GL--REQ-----------------FH-FLRSPAPWLIFAATMFGNAGVFAWFSYIKPYMMFISGFSETSMTFIM 241 (382)
T ss_pred ------CH--HHH-----------------HH-HhcChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHH
Confidence 00 000 00 0122322222222221 2222222233345666 4799999999999
Q ss_pred HHHHHHHHHHHHHHHHHHhhhchhhhhHHHHHHHHHHHHHHHHHHhhcchHHHHHHHHHHHHhhhchhhhhhhh-hhhhh
Q 011118 335 GISATIGIAATILYPILQSRISTLRTGLWSIWSQWFCLLICVASIWIHNSLVAAYMLMVGVATSRLGLWMFDLS-VIQQM 413 (493)
Q Consensus 335 ~~~av~GllgT~~~~~l~~riGl~r~g~~~~~~q~~~L~~~v~~~~~~~~~~s~~~l~~gi~~SR~GLw~fDl~-~~~l~ 413 (493)
...++++++|.++.+++.+|+|..|...++.....+.. +.........+. ......+...|....... .....
T Consensus 242 ~~~~~~~~ig~~~~g~l~~r~~~~~~~~~~~~~~~i~~---~~~~~~~~~~~~---~~~~~~~~~~g~~~~~~~~~~~~~ 315 (382)
T PRK10091 242 MLVGLGMVLGNLLSGRLSGRYSPLRIAAVTDFIIVLAL---LMLFFFGGMKTA---SLIFAFICCAGLFALSAPLQILLL 315 (382)
T ss_pred HHHHHHHHHHhHHHheeccccCchhHHHHHHHHHHHHH---HHHHHHHhhHHH---HHHHHHHHHHHHHhhhHHHHHHHH
Confidence 99999999999999999999998777665554222111 111111111111 112222333444444433 23466
Q ss_pred hccCCCCcchhHHHHHHHHHHhhHHHHHHHHHhccCCCCchHHHHHHHHHHHHHHHHHHHHHHHhh
Q 011118 414 QDLVPESDRCVVGGVQNSLQSTMDLMAYTMGIIISNPQDFWKLILISVIVVTLAAILYTFHLYRIR 479 (493)
Q Consensus 414 Qe~vp~~~rG~v~gv~~sl~~~f~l~~~~~~ii~~~p~~F~~l~~~S~~~V~~~~~l~~~~~~~~R 479 (493)
|+..|++.+|+..+ +...+-+..++..+.|.+...-..+......+.+.+..+......+.+++|
T Consensus 316 ~~~~~~~~~~~~~~-~~~~~~g~~~Gp~~~G~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 380 (382)
T PRK10091 316 QNAKGGELLGAAGG-QIAFNLGSAIGAYCGGMMLTLGLAYNYVALPAALLSFAAMSSLLLYGRYKR 380 (382)
T ss_pred HhCCcchHHHHHHH-HHHHHHHHHHHHHHhHHHHHcccCcchHHHHHHHHHHHHHHHHHHHhhhhc
Confidence 77777777877654 333444448888888988876555666666665555555555555544443
No 33
>PRK10054 putative transporter; Provisional
Probab=99.56 E-value=1.2e-11 Score=129.79 Aligned_cols=353 Identities=11% Similarity=0.075 Sum_probs=210.7
Q ss_pred hhHHHHHHHHHHHHHhhHHHHHHHHHHHHHhCCCchHHHHHHHHHHHHHHHhhhccceeeecccchhHHHHHHHHHHHHH
Q 011118 17 FLTTYLYVAHFLARWGARMWEFSVGLYMISVWPDSLLFAAIYGAVESASIALFGPIVGHWVDKLTYVKVLQIWLVTQNLS 96 (493)
Q Consensus 17 ~~~~~L~~s~~lS~~Gdr~~~Fa~~L~lv~l~~~sll~~sv~gl~~~l~~llfg~~vG~~vDr~~R~~v~~~~~~~q~~~ 96 (493)
|+++.+..+.++...|..+..--.|.++.+.++-|...++.......+..++++++.|.+.||.+||+++..+.+...+.
T Consensus 7 ~~~~~l~~~~~~~~~g~~~~~~~l~~~l~~~~g~s~~~~g~~~s~~~~~~~~~~~~~G~l~Dr~g~k~~~~~~~~~~~~~ 86 (395)
T PRK10054 7 RSTSALLASSLLLTIGRGATLPFMTIYLSRQYSLSVDLIGYAMTIALTIGVVFSLGFGILADKFDKKRYMLLAITAFASG 86 (395)
T ss_pred chHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCcchhHHHHHHHHHHH
Confidence 47889999999999999998888888888888888889999888888999999999999999999999988776544333
Q ss_pred HHHHHHHHHHHHhhcccccchhHHHHHHHHHHHHHHHHHHhhhhhhhhhhccceEEEecCCCChhhhhhhhhHHHhHHHH
Q 011118 97 FIVAGVSVITLLFFSSLKSTNFIAFVLLVILTNISGAVGVISTLAGTILIEREWVVVISEGHPPEALTKMNSIIRRIDLT 176 (493)
Q Consensus 97 v~~s~~~~~~~l~~~~~~~~~~~~~~~l~~~~~~~g~~~~l~~~a~~iaieRDWvv~i~~~~~~~~L~~~Na~mrriDl~ 176 (493)
+.. +. ..+ ++..+..+. .+.++....+.++. ..|+....++ ++..+.++..+.....
T Consensus 87 ----~~~-~~-~~~------~~~~~~~~~---~~~g~~~~~~~~~~-----~~~~~~~~~~---~~~~~~~g~~~~~~~l 143 (395)
T PRK10054 87 ----FIA-IP-LVN------NVTLVVLFF---ALINCAYSVFSTVL-----KAWFADNLSS---TSKTKIFSLNYTMLNI 143 (395)
T ss_pred ----HHH-HH-HHh------HHHHHHHHH---HHHHHHHHHHHHHH-----HHHHHHhcCH---hHHHHHHHHHHHHHHH
Confidence 111 11 111 111111111 12233222322221 2234333332 5688899999999999
Q ss_pred HHhhhhHHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCcchhhhhhhhccCCCcccccccCCcccccccc
Q 011118 177 CKLLAPAITGFIISFVSLQASAMTLAIWTTVTVWVEYWLFMSVYKGIPALAESSQRRIRRSMPIDMEQSTSMPRERESLL 256 (493)
Q Consensus 177 ~~l~gP~~~G~l~~~~s~~~a~~~i~~~n~~S~~ve~~~l~~Vy~~~p~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 256 (493)
...+||.++|.+.. .+.+....+. ++..++...++... .|+.+ |++.++
T Consensus 144 g~~igp~l~~~l~~-~g~~~~f~~~----~~~~~i~~i~~~~~---~~~~~-----------~~~~~~------------ 192 (395)
T PRK10054 144 GWTVGPPLGTLLVM-QSINLPFWLA----AICSAFPLVFIQIW---VQRSE-----------KAIATE------------ 192 (395)
T ss_pred HHHHHHHHHHHHHH-hccCcHHHHH----HHHHHHHHHHHHHH---Hhccc-----------cccccc------------
Confidence 99999999999876 4654443222 22222222222221 12111 000000
Q ss_pred ccccchhHHHHHHHHHHHHhhhccccccccceeeecccchHHHHHHHHHH-HHhhhhhhHHHHHH---HHcCCCchHHHH
Q 011118 257 SHDENNAELAEKRWRWKIIDWISNAPCVGAWQVYLKQEVVLPGVSLALLF-FTVLSFGTLMTATL---EWEGIPAYIIGI 332 (493)
Q Consensus 257 ~~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~y~~q~v~la~~alalLy-~tVL~f~~l~~~yl---~~~gls~~~iG~ 332 (493)
. ++. .+ .+..+++|.++......+++ +..-.+......|+ .+.+.++..+|.
T Consensus 193 ----~-----~~~--~~-------------~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~ 248 (395)
T PRK10054 193 ----T-----GSV--WS-------------PSVLLQDKALLWFTCSGFLASFVSGAFASCISQYVMVVADSDFAEKVVAV 248 (395)
T ss_pred ----h-----hhh--hh-------------hhhhccCceehHHHHHHHHHHHHHHHhhhhHHHHHHHhcccchHHHHHHH
Confidence 0 000 00 02234666665544444332 22112222333444 346778889999
Q ss_pred HHHHHHHHHHHHHHHHHHHHhhhchhhhhHHHHHHHHHHHHHHHHHHh-hcchHHHHHHHHHHHHhhhchhhhhhhhhhh
Q 011118 333 ARGISATIGIAATILYPILQSRISTLRTGLWSIWSQWFCLLICVASIW-IHNSLVAAYMLMVGVATSRLGLWMFDLSVIQ 411 (493)
Q Consensus 333 ~r~~~av~GllgT~~~~~l~~riGl~r~g~~~~~~q~~~L~~~v~~~~-~~~~~~s~~~l~~gi~~SR~GLw~fDl~~~~ 411 (493)
+....++..+...+..+++.+|.+..+.-.++.. +...+..... ...+ ...+....++..+|....-.+...
T Consensus 249 ~~~~~~~~~~~~~~~~g~~~~~~~~~~~l~~~~~----~~~~~~~~~~~~~~~---~~~~~~~~~~~~~g~~~~~p~~~~ 321 (395)
T PRK10054 249 VLPVNAAMVVSLQYSVGRRLNAANIRPLMTAGTL----CFVIGLVGFIFSGNS---LLLWGMSAAVFTVGEIIYAPGEYM 321 (395)
T ss_pred HHHhhhhheeeehhHHHHHHccCCchhHHHHHHH----HHHHHHHHHHHcchH---HHHHHHHHHHHHHHHHHHHhhHHH
Confidence 9999888888777888888888876654443332 1122221111 1111 122223344455666665667778
Q ss_pred hhhccCCCCcchhHHHHHHHHHHhhHHHHHHHHHhccCCCCch
Q 011118 412 QMQDLVPESDRCVVGGVQNSLQSTMDLMAYTMGIIISNPQDFW 454 (493)
Q Consensus 412 l~Qe~vp~~~rG~v~gv~~sl~~~f~l~~~~~~ii~~~p~~F~ 454 (493)
++++.+|++.||+..++++...-+.-++.++.|.+...-+.+.
T Consensus 322 ~~~~~~p~~~~~~~~~~~~~~~~G~~~Gp~~~G~l~~~~g~~~ 364 (395)
T PRK10054 322 LIDHIAPPGMKASYFSAQSLGWLGAAINPLVSGVILTTLPPWS 364 (395)
T ss_pred HHHHhCCcccceehHhHHHHHHHHHHHHHHHHHHHHHHcChhh
Confidence 8999999999999999876433344888888888887654433
No 34
>PRK10504 putative transporter; Provisional
Probab=99.55 E-value=1.1e-11 Score=131.98 Aligned_cols=397 Identities=11% Similarity=0.055 Sum_probs=223.7
Q ss_pred cCCCcchhhHHHHHHHHHHHHHhhHHHHHHHHHHHHHhCCCchHHHHHHHHHHHHHHHhhhccceeeecccchhHHHHHH
Q 011118 10 EQPAITSFLTTYLYVAHFLARWGARMWEFSVGLYMISVWPDSLLFAAIYGAVESASIALFGPIVGHWVDKLTYVKVLQIW 89 (493)
Q Consensus 10 ~~~~~~~~~~~~L~~s~~lS~~Gdr~~~Fa~~L~lv~l~~~sll~~sv~gl~~~l~~llfg~~vG~~vDr~~R~~v~~~~ 89 (493)
.+++.+++.++.++.+.++......+.....|.++.+ ++.|....+.......+...+..+..|.+.||++|||++..+
T Consensus 3 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~-~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~d~~g~r~~~~~~ 81 (471)
T PRK10504 3 DLPDSVRWQLWIVAFGFFMQSLDTTIVNTALPSMAQS-LGESPLHMHMVIVSYVLTVAVMLPASGWLADRVGVRNIFFTA 81 (471)
T ss_pred CcchhhHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHH-hCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhchHHHHHHH
Confidence 3445566788999999999999988999999998766 566777777777777788888999999999999999998766
Q ss_pred HHHHHHHHHHHHHHHHHHHhhcccccchhHHHHHHHHHHHHHHHHHHhhhhhhhhhhccceEEEecCCCChhhhhhhhhH
Q 011118 90 LVTQNLSFIVAGVSVITLLFFSSLKSTNFIAFVLLVILTNISGAVGVISTLAGTILIEREWVVVISEGHPPEALTKMNSI 169 (493)
Q Consensus 90 ~~~q~~~v~~s~~~~~~~l~~~~~~~~~~~~~~~l~~~~~~~g~~~~l~~~a~~iaieRDWvv~i~~~~~~~~L~~~Na~ 169 (493)
.+.-.+. +. .+.. . .+...+.+. -.+.|.......+..... -.||. ++ ++..+.++.
T Consensus 82 ~~~~~~~----~~---~~~~----~-~~~~~l~~~---~~l~g~~~~~~~~~~~~~-~~~~~----~~---~~~~~~~~~ 138 (471)
T PRK10504 82 IVLFTLG----SL---FCAL----S-GTLNELLLA---RVLQGVGGAMMVPVGRLT-VMKIV----PR---EQYMAAMTF 138 (471)
T ss_pred HHHHHHH----HH---HHHH----h-CCHHHHHHH---HHHHHhhhHHHHHHHHHH-HHHHc----CH---HHHHHHHHH
Confidence 4332221 11 1111 1 111111111 112233333333232222 23444 22 567888999
Q ss_pred HHhHHHHHHhhhhHHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCcchhhhhhhhccCCCcccc-cccC-
Q 011118 170 IRRIDLTCKLLAPAITGFIISFVSLQASAMTLAIWTTVTVWVEYWLFMSVYKGIPALAESSQRRIRRSMPIDME-QSTS- 247 (493)
Q Consensus 170 mrriDl~~~l~gP~~~G~l~~~~s~~~a~~~i~~~n~~S~~ve~~~l~~Vy~~~p~L~~~~~~~~~~~~~~~~~-~~~~- 247 (493)
.+....+...+||.++|.+.+..|++...........+..+.- .. ..|+...++ ++. +..... ....
T Consensus 139 ~~~~~~~g~~~g~~~~g~l~~~~gw~~~f~~~~~~~~l~~~~~----~~---~~~~~~~~~-~r~---~~~~~~~~~~~~ 207 (471)
T PRK10504 139 VTLPGQVGPLLGPALGGLLVEYASWHWIFLINIPVGIIGAIAT----LM---LMPNYTMQT-RRF---DLSGFLLLAVGM 207 (471)
T ss_pred HHHHHHHHHHhhhHHHHHHHhhccHHHHHHHHHHHHHHHHHHH----HH---hCCCccccC-CCC---ChHHHHHHHHHH
Confidence 9988899999999999999998887766644434444333221 11 223211100 000 000000 0000
Q ss_pred Ccccccccccccc-chhHHHHHH--------HHHHHHhhhccccccccceeeecccchHHHHHHHHHHHHhh-hhhhHHH
Q 011118 248 MPRERESLLSHDE-NNAELAEKR--------WRWKIIDWISNAPCVGAWQVYLKQEVVLPGVSLALLFFTVL-SFGTLMT 317 (493)
Q Consensus 248 ~~~~~~~~~~~~~-~~~~~~~~~--------~~~~~~~~l~~~~~~~g~~~y~~q~v~la~~alalLy~tVL-~f~~l~~ 317 (493)
..... ....++. +-....... ......++-...+-.-.++ .+++|.++..+...+++.... ......+
T Consensus 208 ~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-l~~~~~~~~~l~~~~~~~~~~~~~~~~~~ 285 (471)
T PRK10504 208 ATLTL-ALDGSKGLGLSPLAIAGLVAVGVVALLLYLLHARNNNRALFSLK-LFRTRTFSLGLAGSFAGRIGSGMLPFMTP 285 (471)
T ss_pred HHHHH-HHhcCCcCCcchHHHHHHHHHHHHHHHHHHHHHhcCCCCccCHH-HhcccchHHHHHHHHHHHHHHHHHHHHHH
Confidence 00000 0000000 000000000 0000000000000011222 478888888877777664433 3445666
Q ss_pred HHHHH-cCCCchHHHHHHHHHHHHHHHHHHHHHHHHhhhchhhhhHHHHHHHHHHHHHHHHHHhhcchHHHHHHHHHHHH
Q 011118 318 ATLEW-EGIPAYIIGIARGISATIGIAATILYPILQSRISTLRTGLWSIWSQWFCLLICVASIWIHNSLVAAYMLMVGVA 396 (493)
Q Consensus 318 ~yl~~-~gls~~~iG~~r~~~av~GllgT~~~~~l~~riGl~r~g~~~~~~q~~~L~~~v~~~~~~~~~~s~~~l~~gi~ 396 (493)
-|.++ +|.++...|+......++++.+..+.+++.+|+|..|...++... ....+....+.+.... ...+....+
T Consensus 286 ~~~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~~~l~~r~g~~~~~~~~~~~---~~~~~~~~~~~~~~~~-~~~~~~~~~ 361 (471)
T PRK10504 286 VFLQIGLGFSPFHAGLMMIPMVLGSMGMKRIVVQVVNRFGYRRVLVATTLG---LALVSLLFMLVALLGW-YYLLPFVLF 361 (471)
T ss_pred HHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCchHHHHHHHHH---HHHHHHHHHhcccccc-HHHHHHHHH
Confidence 77774 899999999999999999999999999999999987776554431 1111122222221111 111111222
Q ss_pred hhhchhhhhhhhhhhhhhccCCCCcchhHHHHHHHHHHhh-HHHHHHHHHhc
Q 011118 397 TSRLGLWMFDLSVIQQMQDLVPESDRCVVGGVQNSLQSTM-DLMAYTMGIII 447 (493)
Q Consensus 397 ~SR~GLw~fDl~~~~l~Qe~vp~~~rG~v~gv~~sl~~~f-~l~~~~~~ii~ 447 (493)
+..+|........+.+.++.+|++++|+.+|+.+..+++. .++..+.+.+.
T Consensus 362 ~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~g~~ig~~i~g~ll 413 (471)
T PRK10504 362 LQGMVNSTRFSSMNTLTLKDLPDNLASSGNSLLSMIMQLSMSIGVTIAGLLL 413 (471)
T ss_pred HHHHHHHHHHHHHHHHHHHcCCHHhccchHHHHHHHHHHHHHHHHHHHHHHH
Confidence 2224444445667788889999999999999998888777 66666655553
No 35
>PRK03893 putative sialic acid transporter; Provisional
Probab=99.55 E-value=1.8e-11 Score=130.99 Aligned_cols=389 Identities=10% Similarity=0.002 Sum_probs=209.2
Q ss_pred cchhhHHHHHHHHHHHHHhhHHHHHHHHHHHHHhCCCchHHHHHHHHHHHHHHHhhhccceeeecccchhHHHHHHHHHH
Q 011118 14 ITSFLTTYLYVAHFLARWGARMWEFSVGLYMISVWPDSLLFAAIYGAVESASIALFGPIVGHWVDKLTYVKVLQIWLVTQ 93 (493)
Q Consensus 14 ~~~~~~~~L~~s~~lS~~Gdr~~~Fa~~L~lv~l~~~sll~~sv~gl~~~l~~llfg~~vG~~vDr~~R~~v~~~~~~~q 93 (493)
.+.+.+..++++.+++.+...+.....|.+. +-++-|....+.....-.+..++.+++.|.+.||++||+++..+.+..
T Consensus 17 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~-~~~~~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~ 95 (496)
T PRK03893 17 AQWKAFSAAWLGYLLDGFDFVLITLVLTEVQ-GEFGLTTVQAASLISAAFISRWFGGLLLGAMGDRYGRRLAMVISIVLF 95 (496)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcHHHHHHHHHHH
Confidence 3446778899999999998888888888854 455667777777777788888899999999999999999887776443
Q ss_pred HHHHHHHHHHHHHHHhhcccccchhHHHHHHHHHHHHHHHHHHhhhhhhhhhhccceEEEecCCCChhhhhhhhhHHHhH
Q 011118 94 NLSFIVAGVSVITLLFFSSLKSTNFIAFVLLVILTNISGAVGVISTLAGTILIEREWVVVISEGHPPEALTKMNSIIRRI 173 (493)
Q Consensus 94 ~~~v~~s~~~~~~~l~~~~~~~~~~~~~~~l~~~~~~~g~~~~l~~~a~~iaieRDWvv~i~~~~~~~~L~~~Na~mrri 173 (493)
.+. +.+ . .. . .+...+.. ...+.|............. -.|+. ++ ++..+.++.+...
T Consensus 96 ~~~----~~~--~-~~----~-~~~~~l~~---~~~l~G~~~~~~~~~~~~~-~~~~~----~~---~~r~~~~~~~~~~ 152 (496)
T PRK03893 96 SVG----TLA--C-GF----A-PGYWTLFI---ARLVIGMGMAGEYGSSATY-VIESW----PK---HLRNKASGFLISG 152 (496)
T ss_pred HHH----HHH--H-HH----H-hHHHHHHH---HHHHHHHHHHHHHHHHHHH-HHHHc----CH---HHHHHHHHHHHHH
Confidence 332 111 1 11 1 11212111 1123343333333222222 12333 22 5678888888888
Q ss_pred HHHHHhhhhHHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCcchhhhhhhhccCCCcccccccCCccccc
Q 011118 174 DLTCKLLAPAITGFIISFVSLQASAMTLAIWTTVTVWVEYWLFMSVYKGIPALAESSQRRIRRSMPIDMEQSTSMPRERE 253 (493)
Q Consensus 174 Dl~~~l~gP~~~G~l~~~~s~~~a~~~i~~~n~~S~~ve~~~l~~Vy~~~p~L~~~~~~~~~~~~~~~~~~~~~~~~~~~ 253 (493)
-.+..+++|.+.+.+.+..|.+.... ..++....- ++ .+...|+..+.++++++ + ++. . +..+
T Consensus 153 ~~~g~~~~~~~~~~l~~~~~w~~~f~----~~~~~~~~~-~~---~~~~~p~~~~~~~~~~~---~---~~~-~--~~~~ 215 (496)
T PRK03893 153 FSIGAVVAAQVYSLVVPVWGWRALFF----IGILPIIFA-LW---LRKNLPEAEDWKEKHAG---K---APV-R--TMVD 215 (496)
T ss_pred HHHHHHHHHHHHHHHhccCCHHHHHH----HHHHHHHHH-HH---HHHhCCCchhhhhhccc---c---ccc-h--hHHH
Confidence 88999999999999998877765542 223332221 11 12244543211110000 0 000 0 0000
Q ss_pred cccccccchhHHHHHHHHHH-HHhhhccccccccce-------------e-----e-ecccchHHHHHHHHHH-HH-hhh
Q 011118 254 SLLSHDENNAELAEKRWRWK-IIDWISNAPCVGAWQ-------------V-----Y-LKQEVVLPGVSLALLF-FT-VLS 311 (493)
Q Consensus 254 ~~~~~~~~~~~~~~~~~~~~-~~~~l~~~~~~~g~~-------------~-----y-~~q~v~la~~alalLy-~t-VL~ 311 (493)
.....+...... ....... ............+|. . . .+.|.+. .+.....+ +. ..+
T Consensus 216 ~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~ 293 (496)
T PRK03893 216 ILYRGEHRIINI-LLTLAAAAALWFCFAGNLQNAAIVAVLGLLCAAIFISFMVQSSGKRWPTGV-MLMVVVLFAFLYSWP 293 (496)
T ss_pred HHhcchhHHHHH-HHHHHHHHHHHHHHHhhhcchhHHHHHHHHHHHHHHHHHHHhcccchhHHH-HHHHHHHHHHhccch
Confidence 000000000000 0000000 000000000000000 0 0 0111111 11111111 11 123
Q ss_pred hhhHHHHHHH-HcCCCchHHHHHHHHHHHHHHHHHHHHHHHHhhhchhhhhHHHHHHHHHHHHHHHHHHhh-cchHHHHH
Q 011118 312 FGTLMTATLE-WEGIPAYIIGIARGISATIGIAATILYPILQSRISTLRTGLWSIWSQWFCLLICVASIWI-HNSLVAAY 389 (493)
Q Consensus 312 f~~l~~~yl~-~~gls~~~iG~~r~~~av~GllgT~~~~~l~~riGl~r~g~~~~~~q~~~L~~~v~~~~~-~~~~~s~~ 389 (493)
....+..|++ ..|+++...|.+.+...+++++|+++++++.+|+|..+....+..... ......... ....+...
T Consensus 294 ~~~~lp~~l~~~~g~~~~~~g~~~~~~~~~~~~g~~~~g~l~dr~g~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~ 370 (496)
T PRK03893 294 IQALLPTYLKTDLGYDPHTVANVLFFSGFGAAVGCCVGGFLGDWLGTRKAYVCSLLISQ---LLIIPVFAIGGANVWVLG 370 (496)
T ss_pred HHHHHHHHHHhhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcchHHHHHHHHHHH---HHHHHHhhccccHHHHHH
Confidence 4567888997 689999999999999999999999999999999997776554433111 111111111 11212111
Q ss_pred HHHHHHHhhhchhhhhhhhhhhhhhccCCCCcchhHHHHHHHHHHhh-HHHHHHHHHhccCCC
Q 011118 390 MLMVGVATSRLGLWMFDLSVIQQMQDLVPESDRCVVGGVQNSLQSTM-DLMAYTMGIIISNPQ 451 (493)
Q Consensus 390 ~l~~gi~~SR~GLw~fDl~~~~l~Qe~vp~~~rG~v~gv~~sl~~~f-~l~~~~~~ii~~~p~ 451 (493)
.........-.| .......++|+.+|+++||+.+|++.+..++. .++.++.+.+...-+
T Consensus 371 ~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~g~~lgp~l~g~l~~~~g 430 (496)
T PRK03893 371 LLLFFQQMLGQG---ISGLLPKLIGGYFDTEQRAAGLGFTYNVGALGGALAPILGALIAQRLD 430 (496)
T ss_pred HHHHHHHHHhcc---cchhhHHHHHhhCCHHHhhcccchhhhhhhHHHHHHHHHHHHHhccCC
Confidence 111111111122 23455678999999999999999999999887 777888888876644
No 36
>TIGR00881 2A0104 phosphoglycerate transporter family protein.
Probab=99.54 E-value=1.5e-12 Score=132.34 Aligned_cols=361 Identities=11% Similarity=0.042 Sum_probs=200.5
Q ss_pred HHHHHHHhhHHHHHHHHHHHHHhCCCchHHHHHHHHHHHHHHHhhhccceeeecccchhHHHHHHHHHHHHHHHHHHHHH
Q 011118 25 AHFLARWGARMWEFSVGLYMISVWPDSLLFAAIYGAVESASIALFGPIVGHWVDKLTYVKVLQIWLVTQNLSFIVAGVSV 104 (493)
Q Consensus 25 s~~lS~~Gdr~~~Fa~~L~lv~l~~~sll~~sv~gl~~~l~~llfg~~vG~~vDr~~R~~v~~~~~~~q~~~v~~s~~~~ 104 (493)
+.++.......+.++.|. +.+-+.-|....+.......+...+..++.|.+.||++||+++..+.+...+.. .
T Consensus 3 ~~~~~~~~~~~~~~~~~~-~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~----~-- 75 (379)
T TIGR00881 3 GYAAYYLVRKNFALAMPY-LVEEIGLSKTDLGLLLSSFSIAYGISKFVMGSVSDRSNPRVFLPIGLILCAIVN----L-- 75 (379)
T ss_pred hhhHHHHhHHhhhhhhHH-HHHHhCCCHhHHHHHHHHHHHHHHhhhhhhhHHHHhhCCeehhHHHHHHHHHHH----H--
Confidence 345555666777888887 455667788888999999999999999999999999999999888764444331 1
Q ss_pred HHHHhhcccccchhHHHHHHHHHHHHHHHHHHhhhhhhhhhhccceEEEecCCCChhhhhhhhhHHHhHHHHHHhhhh-H
Q 011118 105 ITLLFFSSLKSTNFIAFVLLVILTNISGAVGVISTLAGTILIEREWVVVISEGHPPEALTKMNSIIRRIDLTCKLLAP-A 183 (493)
Q Consensus 105 ~~~l~~~~~~~~~~~~~~~l~~~~~~~g~~~~l~~~a~~iaieRDWvv~i~~~~~~~~L~~~Na~mrriDl~~~l~gP-~ 183 (493)
+.... .+...+.+ .-.+.|.......+... ++-.||. ++ ++..+.++..........+++| +
T Consensus 76 -~~~~~-----~~~~~~~~---~~~~~g~~~~~~~~~~~-~~~~~~~----~~---~~r~~~~~~~~~~~~~g~~~~~~~ 138 (379)
T TIGR00881 76 -FFGFS-----TSLWVMAA---LWALNGIFQGMGWPPCG-RTVTKWF----SR---SERGTWVSFWNCSHNVGGGLLPPL 138 (379)
T ss_pred -HHHHh-----hhHHHHHH---HHHHHHhhccccCCchH-HHHHHhc----CH---hhheeeEeehhccchhHHHHHHHH
Confidence 11110 12112111 11233444444443323 2334554 22 4577888888888899999999 5
Q ss_pred HHHHHHHhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCcchhhhhhhhccCCCcccccccCCccccccccccccchh
Q 011118 184 ITGFIISFVSLQASAMTLAIWTTVTVWVEYWLFMSVYKGIPALAESSQRRIRRSMPIDMEQSTSMPRERESLLSHDENNA 263 (493)
Q Consensus 184 ~~G~l~~~~s~~~a~~~i~~~n~~S~~ve~~~l~~Vy~~~p~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 263 (493)
+++.+....+.+....+..+...+..++ +.. ..|+.+++++.++.+ + ++. ++.+ + +...
T Consensus 139 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~----~~~~~~~~~~~~~~~--~---~~~-~~~~-------~-~~~~ 197 (379)
T TIGR00881 139 VLFGIAELYSWHWVFIVPGIIAIIVSLI---CFL----LLRDSPQSCGLPPAE--E---MPN-EEPD-------G-DAEK 197 (379)
T ss_pred HHHHHHhcCCchhHHHHHHHHHHHHHHH---Hhe----eeCCCccccccCccc--c---Ccc-cccc-------c-cccc
Confidence 6666666666555443322222222211 111 122211111000000 0 000 0000 0 0000
Q ss_pred HHHHHHHHHHHHhhhccccccccceeeecccchHHHHHHH-HHHHHhhhhhhHHHHHHHH-cCCCchHHHHHHHHHHHHH
Q 011118 264 ELAEKRWRWKIIDWISNAPCVGAWQVYLKQEVVLPGVSLA-LLFFTVLSFGTLMTATLEW-EGIPAYIIGIARGISATIG 341 (493)
Q Consensus 264 ~~~~~~~~~~~~~~l~~~~~~~g~~~y~~q~v~la~~ala-lLy~tVL~f~~l~~~yl~~-~gls~~~iG~~r~~~av~G 341 (493)
.+.++. + ....++..+++|.++...... +.++...++...+..|+.+ .|+++...|...+...+++
T Consensus 198 ~~~~~~-------~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~ 265 (379)
T TIGR00881 198 KEEELT-------K-----KQIFLQYVLLNKVLWYISLGYVFVYVVRTGILDWSPLYLTQEKGFSKEKASWAFTLYELGG 265 (379)
T ss_pred cccccc-------c-----hHHHHHHHHhcchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHc
Confidence 000000 0 012233445666555443333 3344445677778888875 7999999999999999999
Q ss_pred HHHHHHHHHHHhhhchhhhhHHHHHHHHHHHHHHHHHHhh-cc-hHHH--HHHHHHHHHhhhchhhhhhhhhhhhhhccC
Q 011118 342 IAATILYPILQSRISTLRTGLWSIWSQWFCLLICVASIWI-HN-SLVA--AYMLMVGVATSRLGLWMFDLSVIQQMQDLV 417 (493)
Q Consensus 342 llgT~~~~~l~~riGl~r~g~~~~~~q~~~L~~~v~~~~~-~~-~~~s--~~~l~~gi~~SR~GLw~fDl~~~~l~Qe~v 417 (493)
+.|.++.+++.+|.+..|........- .....++...+. +. .... ...+..| +...........+.+|.+
T Consensus 266 ~~~~~~~g~l~~r~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~g-----~~~~~~~~~~~~~~~~~~ 339 (379)
T TIGR00881 266 LVGTLLAGWLSDKLFNGRRGPLAVFFM-ALIIVSLLVYWLNPAANPLMDLICLFALG-----FLVYGPQMLIGVIASELA 339 (379)
T ss_pred chhHHHHHHHHHHHcCCcchHHHHHHH-HHHHHHHHHHhcCcchhHHHHHHHHHHHH-----HHHhhhhHHHHHHHHHhc
Confidence 999999999999865444332222110 111112222222 11 1111 1122222 222333444556789999
Q ss_pred CCCcchhHHHHHHHHHHhh-HHHHHHHHHhcc
Q 011118 418 PESDRCVVGGVQNSLQSTM-DLMAYTMGIIIS 448 (493)
Q Consensus 418 p~~~rG~v~gv~~sl~~~f-~l~~~~~~ii~~ 448 (493)
|+++||+..|+.++.+++. .++..+.+.+..
T Consensus 340 ~~~~~g~~~g~~~~~~~~g~~~~~~~~g~l~~ 371 (379)
T TIGR00881 340 PKKAAGTAAGFVGFFAYLGGILAGLPLGYLAD 371 (379)
T ss_pred CcchhHHHHHHHHHhhhhhhhhhhhhHHHHHH
Confidence 9999999999999988887 666677776654
No 37
>PRK15403 multidrug efflux system protein MdtM; Provisional
Probab=99.53 E-value=5.5e-11 Score=125.53 Aligned_cols=377 Identities=14% Similarity=0.122 Sum_probs=207.2
Q ss_pred HHHHHhhHHHHHHHHHHHHHhCCCchHHHHHHHHHHHHHHHhhhccceeeecccchhHHHHHHHHHHHHHHHHHHHHHHH
Q 011118 27 FLARWGARMWEFSVGLYMISVWPDSLLFAAIYGAVESASIALFGPIVGHWVDKLTYVKVLQIWLVTQNLSFIVAGVSVIT 106 (493)
Q Consensus 27 ~lS~~Gdr~~~Fa~~L~lv~l~~~sll~~sv~gl~~~l~~llfg~~vG~~vDr~~R~~v~~~~~~~q~~~v~~s~~~~~~ 106 (493)
+.+....-+..=++|- +..-+..+.-..+..-..-.+...+..++.|.+.||.+||+++..+.+...+. +. .
T Consensus 26 ~~~~~~~~~~~p~l~~-i~~~~~~~~~~~~~~~s~~~~~~~~~~~~~G~l~dr~Grr~~l~~~~~~~~~~----~~---~ 97 (413)
T PRK15403 26 FAAYLTTDLIQPGIIN-VVRDFNADVSLAPASVSLYLAGGMALQWLLGPLSDRIGRRPVLITGALIFTLA----CA---A 97 (413)
T ss_pred HHHHHHHHhhccCHHH-HHHHhCCCHHHHHHHHHHHHHHHHHHHHhhhHHHHHcCchHHHHHHHHHHHHH----HH---H
Confidence 3344444455555555 34445556555565555556777788889999999999999998876433332 11 1
Q ss_pred HHhhcccccchhHHHHHHHHHHHHHHHHHHhhhhhhhhhhccceEEEecCCCChhhhhhhhhHHHhHHHHHHhhhhHHHH
Q 011118 107 LLFFSSLKSTNFIAFVLLVILTNISGAVGVISTLAGTILIEREWVVVISEGHPPEALTKMNSIIRRIDLTCKLLAPAITG 186 (493)
Q Consensus 107 ~l~~~~~~~~~~~~~~~l~~~~~~~g~~~~l~~~a~~iaieRDWvv~i~~~~~~~~L~~~Na~mrriDl~~~l~gP~~~G 186 (493)
... . .++..+.+. -.+.|+.+....+... +.-+||. ++ ++..+.++.+...-.++.++||.++|
T Consensus 98 ~~~----a-~~~~~l~~~---r~l~Gi~~~~~~~~~~-~~~~~~~----~~---~~~~~~~~~~~~~~~~~~~~g~~lg~ 161 (413)
T PRK15403 98 TLF----T-TSMTQFLIA---RFIQGTSICFIATVGY-VTVQEAF----GQ---TKGIKLMAIITSIVLVAPIIGPLSGA 161 (413)
T ss_pred HHH----c-CCHHHHHHH---HHHHHHHHHHHHHHHH-HHHHHhc----CH---HHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 111 1 122121111 1223444433333322 4456665 22 46788889888888999999999999
Q ss_pred HHHHhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCcchhhhhhhhccCCCcccccccCCccccccccccccchhHHH
Q 011118 187 FIISFVSLQASAMTLAIWTTVTVWVEYWLFMSVYKGIPALAESSQRRIRRSMPIDMEQSTSMPRERESLLSHDENNAELA 266 (493)
Q Consensus 187 ~l~~~~s~~~a~~~i~~~n~~S~~ve~~~l~~Vy~~~p~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 266 (493)
.+.+..|++.......+...+..+ +.. ...||-.+ ++ +.+. ..
T Consensus 162 ~l~~~~gw~~~f~~~~~~~~i~~~----~~~---~~lp~~~~---~~-------~~~~------------------~~-- 204 (413)
T PRK15403 162 ALMHFVHWKVLFAIIAVMGLIAFV----GLL---LAMPETVK---RG-------AVPF------------------SA-- 204 (413)
T ss_pred HHHHhcCHHHHHHHHHHHHHHHHH----HHH---HhCCCCcc---cc-------CCCC------------------Ch--
Confidence 999888887776544444333322 211 12343110 00 0000 00
Q ss_pred HHHHHHHHHhhhccccccccceeeecccchHHHHHHHHHH-HHhhhhhhHHHHHHHH-cCCCchHHHHHHHHHHHHHHHH
Q 011118 267 EKRWRWKIIDWISNAPCVGAWQVYLKQEVVLPGVSLALLF-FTVLSFGTLMTATLEW-EGIPAYIIGIARGISATIGIAA 344 (493)
Q Consensus 267 ~~~~~~~~~~~l~~~~~~~g~~~y~~q~v~la~~alalLy-~tVL~f~~l~~~yl~~-~gls~~~iG~~r~~~av~Gllg 344 (493)
++ ..++++..++||.++.......++ ....++....+.|+.+ .|+++...|........+++.|
T Consensus 205 -----~~---------~~~~~~~ll~~~~~~~~~l~~~~~~~~~~~~~~~~P~~l~~~~g~s~~~~gl~~~~~~~~~~i~ 270 (413)
T PRK15403 205 -----KS---------VLRDFRNVFRNRLFLTGAATLSLSYIPMMSWVAVSPVILIDAGGMTTSQFAWTQVPVFGAVIVA 270 (413)
T ss_pred -----HH---------HHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHHhChHHHHHhcCCCHHHHHHHHHHHHHHHHHH
Confidence 00 123344456777777655444333 3445566667778886 5999999999887777788888
Q ss_pred HHHHHHHHhhhchhhhhHHHHHHHHHHH-HHHHHHHhhcchHHHHHHHHHHHHhhhchhhhhhhhhh--hhhhccCCCCc
Q 011118 345 TILYPILQSRISTLRTGLWSIWSQWFCL-LICVASIWIHNSLVAAYMLMVGVATSRLGLWMFDLSVI--QQMQDLVPESD 421 (493)
Q Consensus 345 T~~~~~l~~riGl~r~g~~~~~~q~~~L-~~~v~~~~~~~~~~s~~~l~~gi~~SR~GLw~fDl~~~--~l~Qe~vp~~~ 421 (493)
+.+..++.++.+-.|........+.+.. .......+.+... ..+..+.++.-+|......... .+.|..+|
T Consensus 271 ~~l~~~~~~~~~~~~~~~~~~~~~~ig~~l~~~~~~~~~~~~---~~~~~~~~l~~~G~~~~~p~~~~~al~~~~~~--- 344 (413)
T PRK15403 271 NAIVARFVKDPTEPRFIWRAVPIQLVGLALLIVGNLLWPHVW---LWSVLGTSLYAFGIGLIFPTLFRFTLFSNNLP--- 344 (413)
T ss_pred HHHHHHHhccCCchhHHHHHHHHHHHHHHHHHHHHHHccccH---HHHHHHHHHHHHHHHHHhHHHHHHHhccCCCC---
Confidence 8888887765543343221111111111 1111111122221 1123344444445444444444 56666665
Q ss_pred chhHHHHHHHHHHhh-HHHHHHHHHhccCCCCchHHHHHHHHHHHHHHHHHHHHHHHhhcCCCCh
Q 011118 422 RCVVGGVQNSLQSTM-DLMAYTMGIIISNPQDFWKLILISVIVVTLAAILYTFHLYRIRKHLFHF 485 (493)
Q Consensus 422 rG~v~gv~~sl~~~f-~l~~~~~~ii~~~p~~F~~l~~~S~~~V~~~~~l~~~~~~~~Rghl~h~ 485 (493)
+|+++|+.+.++.+. .++..+.+.+...-..-.+.. ..+.........+....+++|+|-.|-
T Consensus 345 ~G~a~a~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~ 408 (413)
T PRK15403 345 KGTVSASLNMVILMVMAVSVEIGRWLWFNGGRLPFHL-LAVVAGVIVVFTLAGLLNRVRQHQAAE 408 (413)
T ss_pred CcHHHHHHHHHHHHHHHHHHHHHHHHHHcCCchHHHH-HHHHHHHHHHHHHHHHHhhhhhhhhhh
Confidence 699999999999888 888888887755533333322 222222333333334456677876663
No 38
>PRK11663 regulatory protein UhpC; Provisional
Probab=99.52 E-value=3e-11 Score=128.12 Aligned_cols=396 Identities=12% Similarity=0.048 Sum_probs=205.8
Q ss_pred HHHHHHHHHHhhHHHHHHHHHHHHHhCCCchHHHHHHHHHHHHHHHhhhccceeeecccchhHHHHHHHHHHHHHHHHHH
Q 011118 22 LYVAHFLARWGARMWEFSVGLYMISVWPDSLLFAAIYGAVESASIALFGPIVGHWVDKLTYVKVLQIWLVTQNLSFIVAG 101 (493)
Q Consensus 22 L~~s~~lS~~Gdr~~~Fa~~L~lv~l~~~sll~~sv~gl~~~l~~llfg~~vG~~vDr~~R~~v~~~~~~~q~~~v~~s~ 101 (493)
+..+.++............|.+..+ ++-|...++.....-.++..+.+++.|.+.||++||+++..+.+.-.+. +
T Consensus 28 ~~~~~~~~~~~~~~~~~~~~~~~~~-~g~s~~~~g~~~~~~~~~~~~~~~~~G~l~dr~g~r~~~~~~~~~~~~~----~ 102 (434)
T PRK11663 28 MYLGYALFYFTRKSFNAAMPEMLAD-LGLSRSDIGLLATLFYITYGVSKFVSGIVSDRSNARYFMGIGLIATGII----N 102 (434)
T ss_pred HHHHHHHHHHhhhhHHHhhHHHHHh-cCCCHHHHHHHHHHHHHHHHHHHhhhhHHHhhcCCchhHHHHHHHHHHH----H
Confidence 4555555544444667778876554 6678888899999999999999999999999999999987765322211 1
Q ss_pred HHHHHHHhhcccccchhHHHHHHHHHHHHHHHHHHhhhhhhhhhhccceEEEecCCCChhhhhhhhhHHHhHHHHHHhhh
Q 011118 102 VSVITLLFFSSLKSTNFIAFVLLVILTNISGAVGVISTLAGTILIEREWVVVISEGHPPEALTKMNSIIRRIDLTCKLLA 181 (493)
Q Consensus 102 ~~~~~~l~~~~~~~~~~~~~~~l~~~~~~~g~~~~l~~~a~~iaieRDWvv~i~~~~~~~~L~~~Na~mrriDl~~~l~g 181 (493)
. +... ..++..+.+. -.+.|.......+... ++-.||. ++ ++..+..+.+...-....+++
T Consensus 103 ~---~~~~-----~~~~~~l~~~---~~l~g~~~g~~~~~~~-~~~~~~~----~~---~~rg~~~~~~~~~~~~g~~~~ 163 (434)
T PRK11663 103 I---LFGF-----SSSLWAFALL---WVLNAFFQGWGWPVCA-KLLTAWY----SR---TERGGWWAIWNTAHNVGGALI 163 (434)
T ss_pred H---HHHH-----HhHHHHHHHH---HHHHHHHHHccchHHH-HHHHHhC----CH---HHHHHHHHHHHHHHHHHHHHH
Confidence 1 1111 0111111111 1122333333333322 3334565 22 457888888888889999999
Q ss_pred hHHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCcchhhhhhhhccCCCcccccccCCccccccccccccc
Q 011118 182 PAITGFIISFVSLQASAMTLAIWTTVTVWVEYWLFMSVYKGIPALAESSQRRIRRSMPIDMEQSTSMPRERESLLSHDEN 261 (493)
Q Consensus 182 P~~~G~l~~~~s~~~a~~~i~~~n~~S~~ve~~~l~~Vy~~~p~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 261 (493)
|.+.|.+....|.+....+.++...+..+. ... ..|+.++..+. |+..++.++. . ..+++.
T Consensus 164 ~~~~~~l~~~~gw~~~f~~~~i~~~~~~~~---~~~----~~~~~p~~~~~------~~~~~~~~~~-~-----~~~~~~ 224 (434)
T PRK11663 164 PLVVGAIALHYGWRYGMMIAGIIAIVVGLF---LCW----RLRDKPQAMGL------PSVGEWRHDA-L-----ELAQQQ 224 (434)
T ss_pred HHHHHHHHHcccHHHHHHHHHHHHHHHHHH---HHH----HcCCCHhhcCC------CCcccccccc-c-----ccchhc
Confidence 999999998888776654433333322211 111 12221110000 0000000000 0 000000
Q ss_pred hhHHHHHHHHHHHHhhhccccccccce-eeecccchHHHHHHH-HHHHHhhhhhhHHHHHHH-HcCCCchHHHHHHHHHH
Q 011118 262 NAELAEKRWRWKIIDWISNAPCVGAWQ-VYLKQEVVLPGVSLA-LLFFTVLSFGTLMTATLE-WEGIPAYIIGIARGISA 338 (493)
Q Consensus 262 ~~~~~~~~~~~~~~~~l~~~~~~~g~~-~y~~q~v~la~~ala-lLy~tVL~f~~l~~~yl~-~~gls~~~iG~~r~~~a 338 (493)
.++..+ .++-++ ..+++|.+....... +.|+...++...+..|++ +.|+++...+...+.-.
T Consensus 225 --~~~~~~-------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~l~~~~g~s~~~a~~~~~~~~ 289 (434)
T PRK11663 225 --EGAGLS-------------RKEILTKYVLLNPYIWLLSFSYVLVYVVRAAINDWGNLYMSETLGVDLVTANSAVSMFE 289 (434)
T ss_pred --cccCCC-------------hhhhHHHHHhcChHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCHHHHHHHHHHHH
Confidence 000000 011111 124555444433322 333333345567788886 57999999999999889
Q ss_pred HHHHHHHHHHHHHHhhhch-hhhhHHHHHHHHHHHHHHHHHH-hhcc-hHHHHHHHHHHHHhhhchhhhhhhhhhhhhhc
Q 011118 339 TIGIAATILYPILQSRIST-LRTGLWSIWSQWFCLLICVASI-WIHN-SLVAAYMLMVGVATSRLGLWMFDLSVIQQMQD 415 (493)
Q Consensus 339 v~GllgT~~~~~l~~riGl-~r~g~~~~~~q~~~L~~~v~~~-~~~~-~~~s~~~l~~gi~~SR~GLw~fDl~~~~l~Qe 415 (493)
++++.|.++.+++.+|++- .|....-.. .++...+.... ..+. +......++.++...-.|. -.....+..|
T Consensus 290 ~~~~~g~~~~g~l~dr~~~~~r~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~---~~~~~~~~~~ 364 (434)
T PRK11663 290 LGGFIGALVAGWGSDKLFNGNRGPMNLIF--AAGILLSVGSLWLMPFASYVMQAACFFTIGFFVFGP---QMLIGMAAAE 364 (434)
T ss_pred HHHHHHHHHHhhhHHHhccCCccHHHHHH--HHHHHHHHHHHHHcccccHHHHHHHHHHHHHHHhhH---HHHHHHHHHh
Confidence 9999999999999999831 222111000 01111111111 1111 1111111111111111111 1111234577
Q ss_pred cCCCCcchhHHHHHHHHHHhh-HHHHHHHHHhccCCCCchHHHHHHHHHHHHHHHHHHHHHHHhhcCC
Q 011118 416 LVPESDRCVVGGVQNSLQSTM-DLMAYTMGIIISNPQDFWKLILISVIVVTLAAILYTFHLYRIRKHL 482 (493)
Q Consensus 416 ~vp~~~rG~v~gv~~sl~~~f-~l~~~~~~ii~~~p~~F~~l~~~S~~~V~~~~~l~~~~~~~~Rghl 482 (493)
..|+++||++.|+.+++.++. -++..+.+.+....+ ......+..+....++ +...+..|.|.|.
T Consensus 365 ~~~~~~~g~~~g~~~~~~~~g~~~~p~~~g~l~~~~g-~~~~f~~~~~~~~~~~-~~~~~~~~~~~~~ 430 (434)
T PRK11663 365 CSHKEAAGAATGFVGLFAYLGAALSGYPLAKVLEIWH-WTGFFVVISIAAGISA-LLLLPFLNAQAPR 430 (434)
T ss_pred cccHhhHHhHHHHHHHHHHHHHHHhcccHHHHHHhcc-cHHHHHHHHHHHHHHH-HHHHHHHhhhchh
Confidence 889999999999999998887 566777787776544 3333333322222222 3334445566654
No 39
>TIGR00895 2A0115 benzoate transport.
Probab=99.51 E-value=4.1e-12 Score=130.19 Aligned_cols=367 Identities=11% Similarity=0.044 Sum_probs=191.4
Q ss_pred HHHHHHHHHHhhHHHHHHHHHHHHHhCCCchHHHHHHHHHHHHHHHhhhccceeeecccchhHHHHHHHHHHHHHHHHHH
Q 011118 22 LYVAHFLARWGARMWEFSVGLYMISVWPDSLLFAAIYGAVESASIALFGPIVGHWVDKLTYVKVLQIWLVTQNLSFIVAG 101 (493)
Q Consensus 22 L~~s~~lS~~Gdr~~~Fa~~L~lv~l~~~sll~~sv~gl~~~l~~llfg~~vG~~vDr~~R~~v~~~~~~~q~~~v~~s~ 101 (493)
.+...+....+...+.+..|.+.. -++-+....+.......+..++.+++.|.+.||++||+++..+.+...+. +
T Consensus 22 ~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~~~~~----~ 96 (398)
T TIGR00895 22 SFLIMLMDGYDLAAMGFAAPAISA-EWGLDPVQLGFLFSAGLIGMAFGALFFGPLADRIGRKRVLLWSILLFSVF----T 96 (398)
T ss_pred HHHHHHHHHHHHHHHHhhHHHHhh-ccCCCHHHHHHHHHHHHHHHHHHHHHhHHHHHHhhhHHHHHHHHHHHHHH----H
Confidence 344455555555566667777544 35557777888888888999999999999999999999988876443333 1
Q ss_pred HHHHHHHhhcccccchhHHHHHHHHHHHHHHHHHHhhhhhhhhhhccceEEEecCCCChhhhhhhhhHHHhHHHHHHhhh
Q 011118 102 VSVITLLFFSSLKSTNFIAFVLLVILTNISGAVGVISTLAGTILIEREWVVVISEGHPPEALTKMNSIIRRIDLTCKLLA 181 (493)
Q Consensus 102 ~~~~~~l~~~~~~~~~~~~~~~l~~~~~~~g~~~~l~~~a~~iaieRDWvv~i~~~~~~~~L~~~Na~mrriDl~~~l~g 181 (493)
. .+... .++..+.+. ..+.|.......+.. .+.-.||. ++ ++..+.++...........+|
T Consensus 97 ~---~~~~~-----~~~~~~~~~---~~~~g~~~~~~~~~~-~~~~~~~~----~~---~~r~~~~~~~~~~~~~g~~~~ 157 (398)
T TIGR00895 97 L---LCALA-----TNVTQLLIL---RFLAGLGLGGLMPNL-NALVSEYA----PK---RFRGTAVGLMFCGYPIGAAVG 157 (398)
T ss_pred H---HHHHc-----cchHHHHHH---HHHHhcccccchhhH-HHHHHHHc----CH---HhhchhHhhHhhHHHHHHHHH
Confidence 1 11110 122222111 112233333333332 22333444 22 457888999999999999999
Q ss_pred hHHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCcchhhhhhhhccC---CCcccccccCCcccccccccc
Q 011118 182 PAITGFIISFVSLQASAMTLAIWTTVTVWVEYWLFMSVYKGIPALAESSQRRIRRS---MPIDMEQSTSMPRERESLLSH 258 (493)
Q Consensus 182 P~~~G~l~~~~s~~~a~~~i~~~n~~S~~ve~~~l~~Vy~~~p~L~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~ 258 (493)
|.++|.+.+..|.+....+.++...+..++- .. ..|+..+..++++++. ..++..+....+. ++..++
T Consensus 158 ~~~~~~l~~~~g~~~~~~~~~~~~~~~~~~~----~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~ 228 (398)
T TIGR00895 158 GFLAGWLIPVFGWRSLFYVGGIAPLLLLLLL----MR---FLPESIDFLVSKRPETVRRIVNAIAPQMQAEA--QSALPE 228 (398)
T ss_pred HHHHHHHhhcccceeehhhhhhHHHHHHHHH----HH---hCCCCChHHHhcCHHHHHHHHHHHHHhccccc--cccccc
Confidence 9999999887776554432222222222221 11 1222211000000000 0000000000000 000000
Q ss_pred ccchhHHHHHHHHHHHHhhhccccccccceeeecccchHHHHHHHHHH----HHhhhhhhHHHHHHHHcCCCchHHHHHH
Q 011118 259 DENNAELAEKRWRWKIIDWISNAPCVGAWQVYLKQEVVLPGVSLALLF----FTVLSFGTLMTATLEWEGIPAYIIGIAR 334 (493)
Q Consensus 259 ~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~y~~q~v~la~~alalLy----~tVL~f~~l~~~yl~~~gls~~~iG~~r 334 (493)
+....... + +.++..++++..+....+.+.+ +........+..|.++.|+++...|.+.
T Consensus 229 -~~~~~~~~----~------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~ 291 (398)
T TIGR00895 229 -QKATQGTK----R------------SVFKALFQGKTARITVLLWLLYFMLLVGVYFLTNWLPKLMVELGFSLSLAATGG 291 (398)
T ss_pred -cccccchh----h------------HHHHHHhcchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHH
Confidence 00000000 0 1111112222222222222222 1122233344445557899999999999
Q ss_pred HHHHHHHHHHHHHHHHHHhhhchhhhhHHHHHHHHHHHHHHHHHHhhcchHHHHHHHHHHHHhhhchhhhhhhhhhhhhh
Q 011118 335 GISATIGIAATILYPILQSRISTLRTGLWSIWSQWFCLLICVASIWIHNSLVAAYMLMVGVATSRLGLWMFDLSVIQQMQ 414 (493)
Q Consensus 335 ~~~av~GllgT~~~~~l~~riGl~r~g~~~~~~q~~~L~~~v~~~~~~~~~~s~~~l~~gi~~SR~GLw~fDl~~~~l~Q 414 (493)
+...+++++|.++.+++.+|+|..+....... +...+....+...+.. .+....++..++.-........+.+
T Consensus 292 ~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~---~~~~~~~~~g~~~~~~~~~~~~~~~ 364 (398)
T TIGR00895 292 ALFNFGGVIGSIIFGWLADRLGPRVTALLLLL----GAVFAVLVGSTLFSPT---LLLLLGAIAGFFVNGGQSGLYALMA 364 (398)
T ss_pred HHHHHHHHHHHHHHHHHHhhcchHHHHHHHHH----HHHHHHHHHHHhhCHH---HHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 99999999999999999999996533222111 1111111111111111 1112223333444455677889999
Q ss_pred ccCCCCcchhHHHHHHHHHHhh-HHHHHHHHH
Q 011118 415 DLVPESDRCVVGGVQNSLQSTM-DLMAYTMGI 445 (493)
Q Consensus 415 e~vp~~~rG~v~gv~~sl~~~f-~l~~~~~~i 445 (493)
+.+|+++||+..|+..+..++. .++.++.|.
T Consensus 365 ~~~~~~~~g~~~g~~~~~~~~g~~~g~~~~G~ 396 (398)
T TIGR00895 365 LFYPTAIRATGVGWAIGIGRLGAIIGPILAGY 396 (398)
T ss_pred hcCCHHHHHHHHHHHHHHHHHHHHHHHHhHHh
Confidence 9999999999999999988777 555555554
No 40
>PRK09705 cynX putative cyanate transporter; Provisional
Probab=99.49 E-value=1.8e-10 Score=120.58 Aligned_cols=369 Identities=12% Similarity=0.037 Sum_probs=208.7
Q ss_pred HHHHHHHHHHhhHHHHH----HHHHHHHHhCCCchHHHHHHHHHHHHHHHhhhccceeeecccchhHHHHHHHHHHHHHH
Q 011118 22 LYVAHFLARWGARMWEF----SVGLYMISVWPDSLLFAAIYGAVESASIALFGPIVGHWVDKLTYVKVLQIWLVTQNLSF 97 (493)
Q Consensus 22 L~~s~~lS~~Gdr~~~F----a~~L~lv~l~~~sll~~sv~gl~~~l~~llfg~~vG~~vDr~~R~~v~~~~~~~q~~~v 97 (493)
+...-.+....+|.+.. +.|.+.. -++-|.-.++.....-.+...+..++.|.+.||++||+++..+...-.+..
T Consensus 10 ~~~~~~~~~~~~~~~~~~~~~~lp~i~~-~~~~s~~~~g~~~s~~~~~~~l~~~~~g~l~dr~G~r~~l~~~~~l~~~~~ 88 (393)
T PRK09705 10 MLLVLVLIGLNMRPLLTSVGPLLPQLRQ-ASGMSFSVAALLTALPVVTMGGLALAGSWLHQHVSERRSVAISLLLIAVGA 88 (393)
T ss_pred HHHHHHHHHHHcchhhhccchhHHHHHH-HhCCCHHHHHHHHHHHHHHHHHHhhhhHHHHHHhCchHHHHHHHHHHHHHH
Confidence 33445666666665444 4565443 345577778888888888999999999999999999999988874433331
Q ss_pred HHHHHHHHHHHhhcccccchhHHHHHHHHHHHHHHHHHHhhhhhhhhhhccceEEEecCCCChhhhhhhhhHHHhHHHHH
Q 011118 98 IVAGVSVITLLFFSSLKSTNFIAFVLLVILTNISGAVGVISTLAGTILIEREWVVVISEGHPPEALTKMNSIIRRIDLTC 177 (493)
Q Consensus 98 ~~s~~~~~~~l~~~~~~~~~~~~~~~l~~~~~~~g~~~~l~~~a~~iaieRDWvv~i~~~~~~~~L~~~Na~mrriDl~~ 177 (493)
. .... ..++..+.. .-.+.|.......+. ...+-+||.+ ++..++++.........
T Consensus 89 ~-------~~~~-----a~~~~~ll~---~r~l~Gig~~~~~~~-~~~~~~~~~~--------~~~~~~~g~~~~~~~~g 144 (393)
T PRK09705 89 L-------MREL-----YPQSALLLS---SALLGGVGIGIIQAV-MPSVIKRRFQ--------QRTPLVMGLWSAALMGG 144 (393)
T ss_pred H-------HHHH-----CcchHHHHH---HHHHHHhHHHHHhhh-hhHHHHHHcc--------ccchhHHHHHHHHHHHH
Confidence 1 1111 112222211 122334444444433 2334566752 23467788777767777
Q ss_pred HhhhhHHHHHHHHhh-hhHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCcchhhhhhhhccCCCcccccccCCcccccccc
Q 011118 178 KLLAPAITGFIISFV-SLQASAMTLAIWTTVTVWVEYWLFMSVYKGIPALAESSQRRIRRSMPIDMEQSTSMPRERESLL 256 (493)
Q Consensus 178 ~l~gP~~~G~l~~~~-s~~~a~~~i~~~n~~S~~ve~~~l~~Vy~~~p~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 256 (493)
-.+||.+++.+.+.. +.+.+..+..+...+..+ ......++.|+ +.++.
T Consensus 145 ~~~g~~~~~~l~~~~~~w~~~~~~~~~~~~~~~~----~~~~~~~~~~~---------------~~~~~----------- 194 (393)
T PRK09705 145 GGLGAAITPWLVQHSETWYQTLAWWALPAVVALF----AWWWQSAREVA---------------SSHKT----------- 194 (393)
T ss_pred HHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHH----HHHHHhcCCCc---------------cccCC-----------
Confidence 888888888887764 555544332222222211 11111111110 00000
Q ss_pred ccccchhHHHHHHHHHHHHhhhccccccccceeeecccch-HHHHHHHHHHHHhhhhhhHHHHHHHHcCCCchHHHHHHH
Q 011118 257 SHDENNAELAEKRWRWKIIDWISNAPCVGAWQVYLKQEVV-LPGVSLALLFFTVLSFGTLMTATLEWEGIPAYIIGIARG 335 (493)
Q Consensus 257 ~~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~y~~q~v~-la~~alalLy~tVL~f~~l~~~yl~~~gls~~~iG~~r~ 335 (493)
. . . .. ..+++|.+ ...+...+.++...++...+..|+.++|+++...|...+
T Consensus 195 ----~--~--~---------------~~----~~l~~~~~~~l~~~~~~~~~~~~~~~~~lp~~l~~~g~s~~~ag~~~~ 247 (393)
T PRK09705 195 ----T--T--T---------------PV----RVVFTPRAWTLGVYFGLINGGYASLIAWLPAFYIEIGASAQYSGSLLA 247 (393)
T ss_pred ----C--c--C---------------Cc----ccccCHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCChhhhhHHHH
Confidence 0 0 0 00 01122322 222222222233334555677888889999999999999
Q ss_pred HHHHHHHHHHHHHHHHHhhhchhhhhHHHHHHHHHHHHHHHHHHhhcchHHHHHHHHHHHHhhhchhhhhhhhhhhhhhc
Q 011118 336 ISATIGIAATILYPILQSRISTLRTGLWSIWSQWFCLLICVASIWIHNSLVAAYMLMVGVATSRLGLWMFDLSVIQQMQD 415 (493)
Q Consensus 336 ~~av~GllgT~~~~~l~~riGl~r~g~~~~~~q~~~L~~~v~~~~~~~~~~s~~~l~~gi~~SR~GLw~fDl~~~~l~Qe 415 (493)
+.++++++|.++.+++.+|+|..+....+... +........+.+........++.|+. .|.. +..+.....|+
T Consensus 248 ~~~i~~i~g~~~~g~l~~r~~~~~~~~~~~~l---~~~~~~~~~~~~~~~~~~~~~l~g~g---~g~~-~~~~~~~~~~~ 320 (393)
T PRK09705 248 LMTLGQAAGALLMPAMARHQDRRKLLMLALVL---QLVGFCGFIWLPLQLPVLWAMVCGLG---LGGA-FPLCLLLALDH 320 (393)
T ss_pred HHHHHHHHHHHHHHHHHhhccchHHHHHHHHH---HHHHHHHHHHccchHHHHHHHHHHHh---ccch-HHHHHHHHHhh
Confidence 99999999999999999999977766655432 22221222223322222222233332 2211 22344455666
Q ss_pred cCCCCcchhHHHHHHHHHHhh-HHHHHHHHHhccCCCCchHHHHHHHHHHHHHHHHHHHHHHHhh
Q 011118 416 LVPESDRCVVGGVQNSLQSTM-DLMAYTMGIIISNPQDFWKLILISVIVVTLAAILYTFHLYRIR 479 (493)
Q Consensus 416 ~vp~~~rG~v~gv~~sl~~~f-~l~~~~~~ii~~~p~~F~~l~~~S~~~V~~~~~l~~~~~~~~R 479 (493)
..|++++|+++|+.+++.+.. .++..+.+.+...-+.+.....+.......+......+..+.|
T Consensus 321 ~~~~~~~g~~~g~~~~~~~~~~~~gp~~~G~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 385 (393)
T PRK09705 321 SVQPAIAGKLVAFMQGIGFIIAGLAPWFSGVLRSISGNYLMDWAFHALCVVGLMIITLRFAPARF 385 (393)
T ss_pred cCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCchHHHHHHHHHHHHHHHHHHHhccccc
Confidence 667789999999999999887 7788888888887766666555555444444444444433333
No 41
>PRK10473 multidrug efflux system protein MdtL; Provisional
Probab=99.49 E-value=9.3e-11 Score=121.90 Aligned_cols=273 Identities=14% Similarity=0.055 Sum_probs=163.6
Q ss_pred hhHHHHHHHHHHHHHhhHHHHHHHHHHHHHhCCCchHHHHHHHHHHHHHHHhhhccceeeecccchhHHHHHHHHHHHHH
Q 011118 17 FLTTYLYVAHFLARWGARMWEFSVGLYMISVWPDSLLFAAIYGAVESASIALFGPIVGHWVDKLTYVKVLQIWLVTQNLS 96 (493)
Q Consensus 17 ~~~~~L~~s~~lS~~Gdr~~~Fa~~L~lv~l~~~sll~~sv~gl~~~l~~llfg~~vG~~vDr~~R~~v~~~~~~~q~~~ 96 (493)
|-.+..+..-.....|..++--+.|.+..+ ++.|...++.....-.+..++..++.|.+.||++|||++..+.+.-.+.
T Consensus 3 ~~~~~~~~~~~~~~~~~~~~~~~lp~~~~~-~~~s~~~~~~~~~~~~~~~~~~~~~~G~l~Dr~g~r~~l~~~~~~~~i~ 81 (392)
T PRK10473 3 RFLLCSFALVLLYPAGIDMYLVGLPRIAAD-LNASEAQLHIAFSVYLAGMAAAMLFAGKIADRSGRKPVAIPGAALFIIA 81 (392)
T ss_pred hHHHHHHHHHHHHHHHHHHHhhhHHHHHHH-hCCCHHHHHHHHHHHHHHHHHHHHhHhHHHHHhCChHHHHHHHHHHHHH
Confidence 445667778888999999999999997665 4557777787777788888899999999999999999887765332222
Q ss_pred HHHHHHHHHHHHhhcccccchhHHHHHHHHHHHHHHHHHHhhhhhhhhhhccceEEEecCCCChhhhhhhhhHHHhHHHH
Q 011118 97 FIVAGVSVITLLFFSSLKSTNFIAFVLLVILTNISGAVGVISTLAGTILIEREWVVVISEGHPPEALTKMNSIIRRIDLT 176 (493)
Q Consensus 97 v~~s~~~~~~~l~~~~~~~~~~~~~~~l~~~~~~~g~~~~l~~~a~~iaieRDWvv~i~~~~~~~~L~~~Na~mrriDl~ 176 (493)
+.+ . .. . .+...+... -.+.|.......+... +.-+||. ++ ++..+.++.......+
T Consensus 82 ----~~~--~-~~----~-~~~~~~~~~---~~l~g~~~~~~~~~~~-~~i~~~~----~~---~~r~~~~~~~~~~~~i 138 (392)
T PRK10473 82 ----SLL--C-SL----A-ETSSLFLAG---RFLQGIGAGCCYVVAF-AILRDTL----DD---RRRAKVLSLLNGITCI 138 (392)
T ss_pred ----HHH--H-HH----h-CcHHHHHHH---HHHHHhhhhHHHHHHH-HHHHHHc----CH---HHHHHHHHHHHHHHHH
Confidence 211 1 11 1 111111111 1123333333332222 2234444 22 5678889998888889
Q ss_pred HHhhhhHHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCcchhhhhhhhccCCCcccccccCCcccccccc
Q 011118 177 CKLLAPAITGFIISFVSLQASAMTLAIWTTVTVWVEYWLFMSVYKGIPALAESSQRRIRRSMPIDMEQSTSMPRERESLL 256 (493)
Q Consensus 177 ~~l~gP~~~G~l~~~~s~~~a~~~i~~~n~~S~~ve~~~l~~Vy~~~p~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 256 (493)
+.+++|.+++.+.+..|.+....+..+...+..+.-+ . ..||.+++ ++ ++
T Consensus 139 ~~~~~~~i~~~l~~~~g~~~~~~~~~~~~~i~~~~~~---~----~~~~~~~~--~~---------~~------------ 188 (392)
T PRK10473 139 IPVLAPVLGHLIMLKFPWQSLFYTMAAMGILVLLLSL---F----ILKETRPA--RA---------PA------------ 188 (392)
T ss_pred HHHHHHHHHHHHHhCcChHHHHHHHHHHHHHHHHHHH---H----HcCCCCCc--cc---------CC------------
Confidence 9999999999988777776655444443333332211 1 12321100 00 00
Q ss_pred ccccchhHHHHHHHHHHHHhhhccccccccceeeecccchHHHHHHHHHH-HHhhhhhhHHHHHHH-HcCCCchHHHHHH
Q 011118 257 SHDENNAELAEKRWRWKIIDWISNAPCVGAWQVYLKQEVVLPGVSLALLF-FTVLSFGTLMTATLE-WEGIPAYIIGIAR 334 (493)
Q Consensus 257 ~~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~y~~q~v~la~~alalLy-~tVL~f~~l~~~yl~-~~gls~~~iG~~r 334 (493)
+... . ++ .+..+++|.++.......+. .....+......|.. +.|+++...|.+.
T Consensus 189 ----~~~~--~----~~-------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~ 245 (392)
T PRK10473 189 ----ASSK--P----RE-------------NSESLLNRFFLSRLVITTLSVTVILTFVNTSPVLLMEQMGFSRGEYAIIM 245 (392)
T ss_pred ----ccch--H----HH-------------HHHHHhCHHHHHHHHHHHHHHHHHHHHHHhCHHHHHHHcCCCHHHHHHHH
Confidence 0000 0 00 00113444444333333222 222333333444555 5799999999999
Q ss_pred HHHHHHHHHHHHHHHHHHhhhchhhhhHHHHH
Q 011118 335 GISATIGIAATILYPILQSRISTLRTGLWSIW 366 (493)
Q Consensus 335 ~~~av~GllgT~~~~~l~~riGl~r~g~~~~~ 366 (493)
...+++++++.+..+++.+|+|..|...++..
T Consensus 246 ~~~~~~~i~~~~~~~~l~~r~g~~~~~~~~~~ 277 (392)
T PRK10473 246 ALTAGVSMTVSFSTPFALGIFKPRTLMLTSQV 277 (392)
T ss_pred HHHHHHHHHHHHHHHHHHHhcCHHHHHHHHHH
Confidence 99999999999999999999998776655543
No 42
>PRK11273 glpT sn-glycerol-3-phosphate transporter; Provisional
Probab=99.48 E-value=9.1e-11 Score=125.07 Aligned_cols=402 Identities=10% Similarity=0.044 Sum_probs=202.1
Q ss_pred hhHHHHHHHHHHHHHhhHHH----HHHHHHHHHHhCCCchHHHHHHHHHHHHHHHhhhccceeeecccchhHHHHHHHHH
Q 011118 17 FLTTYLYVAHFLARWGARMW----EFSVGLYMISVWPDSLLFAAIYGAVESASIALFGPIVGHWVDKLTYVKVLQIWLVT 92 (493)
Q Consensus 17 ~~~~~L~~s~~lS~~Gdr~~----~Fa~~L~lv~l~~~sll~~sv~gl~~~l~~llfg~~vG~~vDr~~R~~v~~~~~~~ 92 (493)
+.-+.++.+.++...+..+. .++.|.+ ... .-|....+.......+...+.+++.|.+.||++||+++..+.+.
T Consensus 25 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~l-~~~-g~s~~~~g~~~~~~~i~~~~~~~~~G~l~Dr~g~k~~l~~~~~~ 102 (452)
T PRK11273 25 RLRWQIFLGIFFGYAAYYLVRKNFALAMPYL-VEQ-GFSRGDLGFALSGISIAYGFSKFIMGSVSDRSNPRVFLPAGLIL 102 (452)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhhHHH-HHc-CCCHHHHHHHHHHHHHHHHHHHhhhhhhhhccCCchhHHHHHHH
Confidence 34456677777776665544 4566653 344 56778888888889999999999999999999999998887643
Q ss_pred HHHHHHHHHHHHHHHHhhcccccchhHHHHHHHHHHHHHHHHHHhhhhhhhhhhccceEEEecCCCChhhhhhhhhHHHh
Q 011118 93 QNLSFIVAGVSVITLLFFSSLKSTNFIAFVLLVILTNISGAVGVISTLAGTILIEREWVVVISEGHPPEALTKMNSIIRR 172 (493)
Q Consensus 93 q~~~v~~s~~~~~~~l~~~~~~~~~~~~~~~l~~~~~~~g~~~~l~~~a~~iaieRDWvv~i~~~~~~~~L~~~Na~mrr 172 (493)
-.+. +.+ .. +.+ ....++..+..+. .+.|..+....+.....+ -||. .+ ++..+.++....
T Consensus 103 ~~i~----~~~-~~-~~~--~~~~~~~~~~~~~---~l~gi~~g~~~~~~~~~~-~~~~----~~---~~r~~~~~~~~~ 163 (452)
T PRK11273 103 AAAV----MLF-MG-FVP--WATSSIAVMFVLL---FLCGWFQGMGWPPCGRTM-VHWW----SQ---KERGGIVSVWNC 163 (452)
T ss_pred HHHH----HHH-HH-hhh--cccccHHHHHHHH---HHHHHHHhccchHHHHHH-HHhC----Ch---HHHHHHHHHHHH
Confidence 3332 111 11 111 0111221111111 123434443333222222 2343 22 456777777655
Q ss_pred HHHHHH-hhhhHHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCcchh-hhhhhhccCCCcccccccCCcc
Q 011118 173 IDLTCK-LLAPAITGFIISFVSLQASAMTLAIWTTVTVWVEYWLFMSVYKGIPALAE-SSQRRIRRSMPIDMEQSTSMPR 250 (493)
Q Consensus 173 iDl~~~-l~gP~~~G~l~~~~s~~~a~~~i~~~n~~S~~ve~~~l~~Vy~~~p~L~~-~~~~~~~~~~~~~~~~~~~~~~ 250 (493)
.-.++- +.+|+..+.+....+.+.+..+.+..-.+.. .+.+..+ ++.|+-.. +++++.++ +. ++. .
T Consensus 164 ~~~~g~~~~~~l~~~~~~~~~gw~~~f~i~~~~~~~~~---~l~~~~~-~~~~~~~~~~~~~~~~~-~~---~~~----~ 231 (452)
T PRK11273 164 AHNVGGGLPPLLFLLGMAWFNDWHAALYMPAFAAILVA---LFAFAMM-RDTPQSCGLPPIEEYKN-DY---PDD----Y 231 (452)
T ss_pred HHHhhhhHHHHHHHHHHHHhccHHHHHHHHHHHHHHHH---HHHHHHc-cCCHhhcCCCChhhhhh-cc---ccc----c
Confidence 555554 5667654444333355544433222222222 2222211 12221100 00000000 00 000 0
Q ss_pred ccccccccccchhHHHHHHHHHHHHhhhccccccccce-eeecccchHHHHHHH-HHHHHhhhhhhHHHHHHHH-cCCCc
Q 011118 251 ERESLLSHDENNAELAEKRWRWKIIDWISNAPCVGAWQ-VYLKQEVVLPGVSLA-LLFFTVLSFGTLMTATLEW-EGIPA 327 (493)
Q Consensus 251 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~-~y~~q~v~la~~ala-lLy~tVL~f~~l~~~yl~~-~gls~ 327 (493)
.+++.. +++ ..+.++ ..+++|.++...... +.|....++....+.|+.+ .|+++
T Consensus 232 ------~~~~~~----~~~-------------~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~P~~l~~~~g~s~ 288 (452)
T PRK11273 232 ------NEKHEQ----ELT-------------AKQIFMQYVLPNKLLWYIAIANVFVYLLRYGILDWSPTYLKEVKHFAL 288 (452)
T ss_pred ------ccccCC----Ccc-------------HHHHHHHHHHcChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCH
Confidence 000000 000 011111 124566665544443 3344445677788999986 79999
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHhhhchhhhhHHHHHHHHHHHHHHHHHHhh-c-chHHH--HHHHHHHHHhhhchhh
Q 011118 328 YIIGIARGISATIGIAATILYPILQSRISTLRTGLWSIWSQWFCLLICVASIWI-H-NSLVA--AYMLMVGVATSRLGLW 403 (493)
Q Consensus 328 ~~iG~~r~~~av~GllgT~~~~~l~~riGl~r~g~~~~~~q~~~L~~~v~~~~~-~-~~~~s--~~~l~~gi~~SR~GLw 403 (493)
...|......+++++.|+++++++.+|++..|-....+.. ..+...+....+. + ...+. ..++..|.. .+
T Consensus 289 ~~~~~~~~~~~~~~~~g~~~~G~l~dr~~~~r~~~~~~~~-~~l~~~~~~~~~~~~~~~~~~~~~~~~~~g~~-----~~ 362 (452)
T PRK11273 289 DKSSWAYFLYEYAGIPGTLLCGWMSDKVFRGNRGATGVFF-MTLVTIATIVYWLNPAGNPTVDMACMIVIGFL-----IY 362 (452)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHccCCcchHHHHH-HHHHHHHHHHHHHhcccChHHHHHHHHHHHHH-----HH
Confidence 9999999999999999999999999999544422111111 0122222222222 1 11111 122222221 11
Q ss_pred hhhhhhhhhhhccCCCCcchhHHHHHHHHHHhh-HH-HHHHHHHhccCCCCchHHHHHHHHHHHHHHHHHHHHHHHhhcC
Q 011118 404 MFDLSVIQQMQDLVPESDRCVVGGVQNSLQSTM-DL-MAYTMGIIISNPQDFWKLILISVIVVTLAAILYTFHLYRIRKH 481 (493)
Q Consensus 404 ~fDl~~~~l~Qe~vp~~~rG~v~gv~~sl~~~f-~l-~~~~~~ii~~~p~~F~~l~~~S~~~V~~~~~l~~~~~~~~Rgh 481 (493)
........+.+|..|+++||+.+|..++..++. .+ +..+.+.+....+.-....+....++. +.+....+.+-+|+|
T Consensus 363 ~~~~~~~~~~~~~~p~~~~g~~~g~~~~~~~~g~~~~g~~v~g~l~~~~g~~~~f~~~~~~~~~-~~~~~~~~~~~~~~~ 441 (452)
T PRK11273 363 GPVMLIGLHALELAPKKAAGTAAGFTGLFGYLGGSVAASAIVGYTVDFFGWDGGFMVMIGGSIL-AVILLIVVMIGEKRH 441 (452)
T ss_pred hHHHHHHHHHHHHcChhhhhhHHHHHHHHHHHHHHHhhhhhHHHHHHHhcchHHHHHHHHHHHH-HHHHHHHHhccccch
Confidence 111122335678999999999999999887776 44 467888877665532333333333333 333444444434444
No 43
>TIGR00711 efflux_EmrB drug resistance transporter, EmrB/QacA subfamily. This subfamily of drug efflux proteins, a part of the major faciliator family, is predicted to have 14 potential membrane-spanning regions. Members with known activities include EmrB (multiple drug resistance efflux pump) in E. coli, FarB (antibacterial fatty acid resistance) in Neisseria gonorrhoeae, TcmA (tetracenomycin C resistance) in Streptomyces glaucescens, etc. In most cases, the efflux pump is described as having a second component encoded in the same operon, such as EmrA of E. coli.
Probab=99.47 E-value=6e-11 Score=126.26 Aligned_cols=394 Identities=11% Similarity=-0.010 Sum_probs=221.1
Q ss_pred hHHHHHHHHHHHHHhhHHHHHHHHHHHHHhCCCchHHHHHHHHHHHHHHHhhhccceeeecccchhHHHHHHHHHHHHHH
Q 011118 18 LTTYLYVAHFLARWGARMWEFSVGLYMISVWPDSLLFAAIYGAVESASIALFGPIVGHWVDKLTYVKVLQIWLVTQNLSF 97 (493)
Q Consensus 18 ~~~~L~~s~~lS~~Gdr~~~Fa~~L~lv~l~~~sll~~sv~gl~~~l~~llfg~~vG~~vDr~~R~~v~~~~~~~q~~~v 97 (493)
.+..+..+.++..++..+...+.|.+..+ ++.|....+.......++.++..+..|.+.||++||+++..+.+...+.
T Consensus 3 ~~~~~~~~~~~~~~~~~~~~~~~p~~~~~-~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~- 80 (485)
T TIGR00711 3 LTIVLMLGTFMAVLDSTIVNVAIPTIAGD-LGSSLSQVQWVITSYMLANAISIPLTGWLAKRFGTRRLFLISTFAFTLG- 80 (485)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHh-cCCChhhhhHHHHHHHHHHHHHHHhHHHHHHHhCcHHHHHHHHHHHHHH-
Confidence 45667889999999999999999997655 5557777888888889999999999999999999999998886544333
Q ss_pred HHHHHHHHHHHhhcccccchhHHHHHHHHHHHHHHHHHHhhhhhhhhhhccceEEEecCCCChhhhhhhhhHHHhHHHHH
Q 011118 98 IVAGVSVITLLFFSSLKSTNFIAFVLLVILTNISGAVGVISTLAGTILIEREWVVVISEGHPPEALTKMNSIIRRIDLTC 177 (493)
Q Consensus 98 ~~s~~~~~~~l~~~~~~~~~~~~~~~l~~~~~~~g~~~~l~~~a~~iaieRDWvv~i~~~~~~~~L~~~Na~mrriDl~~ 177 (493)
+. .+.. ..++..+.... .+.|.......+..... -.||. ++ ++..+.++.......+.
T Consensus 81 ---~~---~~~~-----~~~~~~l~~~~---~~~G~~~~~~~~~~~~~-i~~~~----~~---~~r~~~~~~~~~~~~~g 138 (485)
T TIGR00711 81 ---SL---LCGV-----APNLELMIIFR---VIQGFGGGPLIPLSFST-LLNIY----PP---EKRGRAMAIWGLTVLVA 138 (485)
T ss_pred ---HH---HHhC-----cCCHHHHHHHH---HHHHhhhhhHHHHHHHH-HHHHC----CH---HHHHHHHHHHHHHHHHH
Confidence 11 1111 11222222211 22344444444332322 24454 22 56788888888889999
Q ss_pred HhhhhHHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCcchhhhhhhhccCCCcccccccC---Ccccccc
Q 011118 178 KLLAPAITGFIISFVSLQASAMTLAIWTTVTVWVEYWLFMSVYKGIPALAESSQRRIRRSMPIDMEQSTS---MPRERES 254 (493)
Q Consensus 178 ~l~gP~~~G~l~~~~s~~~a~~~i~~~n~~S~~ve~~~l~~Vy~~~p~L~~~~~~~~~~~~~~~~~~~~~---~~~~~~~ 254 (493)
..+||.++|.+.+..|.+...........+..+. ... ..|+.+++++++.|. .+....... .....++
T Consensus 139 ~~~g~~~~~~l~~~~~w~~~f~~~~~~~~~~~~~----~~~---~~~~~~~~~~~~~d~--~g~~l~~~~~~~~~~~~~~ 209 (485)
T TIGR00711 139 PALGPTLGGWIIENYHWRWIFLINVPIGIIVVVV----AFF---ILPRDKPAASENFDF--LGLLLLSVGLGSLLYGLSE 209 (485)
T ss_pred hhhhhccHhHhccCcCceehhhhhhHHHHHHHHH----HHH---HcCCccccccCCCcH--HHHHHHHHHHHHHHHHHhh
Confidence 9999999999988777665543333333332221 111 123211100000000 000000000 0000000
Q ss_pred ccccccchhHHHHHH-------HHHHHHhhhccccccccceeeecccchHHHHHHHHHH-HHhhhhhhHHHHHHHH-cCC
Q 011118 255 LLSHDENNAELAEKR-------WRWKIIDWISNAPCVGAWQVYLKQEVVLPGVSLALLF-FTVLSFGTLMTATLEW-EGI 325 (493)
Q Consensus 255 ~~~~~~~~~~~~~~~-------~~~~~~~~l~~~~~~~g~~~y~~q~v~la~~alalLy-~tVL~f~~l~~~yl~~-~gl 325 (493)
...++...+...... ......++.+++.....++ .+++|.+........++ +...+....+..|+.+ .|+
T Consensus 210 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~g~ 288 (485)
T TIGR00711 210 GPERGWFDSNEILILSITGLVAIIAFVVWELTDDNPLVDLR-LFKYRNFTIGCVYMSLLGLGLYGSFYLLPLYLQQVLGY 288 (485)
T ss_pred CCCCCCCCchHHHHHHHHHHHHHHHHHHHHHcCCCCccCHH-HHcCCChHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCC
Confidence 000000000000000 0000001111100111222 35666665554444333 4444555677788885 899
Q ss_pred CchHHHHHHHHHHHHHHHHHHHHHHHHhhhchhhhhHHHHHHHHHHHHHHHHHHh-hcchHHHHHHHHHHHHhhhchhhh
Q 011118 326 PAYIIGIARGISATIGIAATILYPILQSRISTLRTGLWSIWSQWFCLLICVASIW-IHNSLVAAYMLMVGVATSRLGLWM 404 (493)
Q Consensus 326 s~~~iG~~r~~~av~GllgT~~~~~l~~riGl~r~g~~~~~~q~~~L~~~v~~~~-~~~~~~s~~~l~~gi~~SR~GLw~ 404 (493)
++...|.......++.+++..+.+++.+|+|..+...++.. +...+..... ...+..+...+....++..+|.-.
T Consensus 289 s~~~~g~~~~~~~~~~~~~~~~~g~l~~r~~~~~~~~~g~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~~~ 364 (485)
T TIGR00711 289 TALQAGLHILPVGLAPMLSSPIAGRMGDKIDPRKLVTIGLI----LYAVGFYWRAFTFTPDTPFLAIALPQFIRGFGMGC 364 (485)
T ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCcHHHHHHHHH----HHHHHHHHHhccCCCCCCHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999997666554443 2222211111 101111111112223334455555
Q ss_pred hhhhhhhhhhccCCCCcchhHHHHHHHHHHhh-HHHHHHHHHhccC
Q 011118 405 FDLSVIQQMQDLVPESDRCVVGGVQNSLQSTM-DLMAYTMGIIISN 449 (493)
Q Consensus 405 fDl~~~~l~Qe~vp~~~rG~v~gv~~sl~~~f-~l~~~~~~ii~~~ 449 (493)
+........|+.+|+++||+.+|+.+...++. .++..+.+.+..+
T Consensus 365 ~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~g~~ig~~i~g~~~~~ 410 (485)
T TIGR00711 365 FFMPLTTIALSGLPPHKIARGSSLSNFTRQLGGSIGTALITTILTN 410 (485)
T ss_pred HHHHHHHHHHhcCCHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 56677788889999999999999999998877 6666776766543
No 44
>TIGR00892 2A0113 monocarboxylate transporter 1.
Probab=99.47 E-value=7.3e-11 Score=126.24 Aligned_cols=385 Identities=10% Similarity=0.023 Sum_probs=201.7
Q ss_pred CcccccCCCcchhhHHHHHHHHHHHHHhhHHHHHHHHHHHH---HhCCCchHHHHHHHHHHHHHHHhhhccceeeecccc
Q 011118 5 PLIVQEQPAITSFLTTYLYVAHFLARWGARMWEFSVGLYMI---SVWPDSLLFAAIYGAVESASIALFGPIVGHWVDKLT 81 (493)
Q Consensus 5 ~~~~~~~~~~~~~~~~~L~~s~~lS~~Gdr~~~Fa~~L~lv---~l~~~sll~~sv~gl~~~l~~llfg~~vG~~vDr~~ 81 (493)
|....|+++.++..-|.++.+.++.....-.+.++.+.++. ..+..|.-..+.....-.+...+.+|..|.++||++
T Consensus 3 ~~~~~~~~~~~~~~~w~i~~~~~~~~~~~~~~~~~~~~~~~~i~~~~g~s~~~~~~~~s~~~~~~~~~~~~~G~l~dr~g 82 (455)
T TIGR00892 3 PALPPEGPPPDGGWGWVVLGATFVSIGFSYAFPKAVTVFFKELQQIFQATYSETAWISSIMLAVLYAGGPISSILVNRFG 82 (455)
T ss_pred CCCCCCCCCCCCCcchHHHHHHHHHHHHHHhhhcchhhhHHHHHHHhCcchhHHHHHHHHHHHHHHHhhHHHHHHHHHcC
Confidence 33444555544433456666666554333233333333332 344445556666655555666788899999999999
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHHhhcccccchhHHHHHHHHHHHHHHHHHHhhhhhhhhhhccceEEEecCCCChh
Q 011118 82 YVKVLQIWLVTQNLSFIVAGVSVITLLFFSSLKSTNFIAFVLLVILTNISGAVGVISTLAGTILIEREWVVVISEGHPPE 161 (493)
Q Consensus 82 R~~v~~~~~~~q~~~v~~s~~~~~~~l~~~~~~~~~~~~~~~l~~~~~~~g~~~~l~~~a~~iaieRDWvv~i~~~~~~~ 161 (493)
||+++..+.+.-.+. +++ .... ..-+..+... ..+.|.......+... ++-.||. + +
T Consensus 83 ~r~~l~~~~~~~~~~----~~~--~~~~-----~~~~~l~~~~---~~l~G~~~~~~~~~~~-~~~~~~~----~----~ 139 (455)
T TIGR00892 83 CRPVVIAGGLLASLG----MIL--ASFS-----SNVIELYLTA---GFITGLGLAFNFQPSL-TMLGKYF----Y----R 139 (455)
T ss_pred chHHHHhhHHHHHHH----HHH--HHHh-----hhHHHHHHHH---HHHHHhcchhhhhHHH-HHHHHHH----H----h
Confidence 999988776433322 221 1011 1111111111 0122322222222222 2334575 2 2
Q ss_pred hhhhhhhHHHhHHHHHHhhhhHHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCcchhhhhhhhccCCCcc
Q 011118 162 ALTKMNSIIRRIDLTCKLLAPAITGFIISFVSLQASAMTLAIWTTVTVWVEYWLFMSVYKGIPALAESSQRRIRRSMPID 241 (493)
Q Consensus 162 ~L~~~Na~mrriDl~~~l~gP~~~G~l~~~~s~~~a~~~i~~~n~~S~~ve~~~l~~Vy~~~p~L~~~~~~~~~~~~~~~ 241 (493)
+..+.++.....-.+...++|.++|.+....|.+.+..+.++.-++..+. ...+ ++.|...++.+.+.+ + .
T Consensus 140 ~r~~a~g~~~~~~~~g~~~~~~l~~~l~~~~gwr~~f~~~~~~~~~~~v~----~~~~-~~~~~~~~~~~~~~~---~-~ 210 (455)
T TIGR00892 140 RRPLANGLAMAGSPVFLSTLAPLNQYLFESFGWRGSFLILGGLLLHCCVC----GALM-RPVGPSQRVSKSKSK---E-G 210 (455)
T ss_pred hHHHHHHHHHhcccHHHHHHHHHHHHHHHHhChHHHHHHHHHHHHHHHHH----HHHh-CCCCccccccccccc---c-c
Confidence 34667777777777788899999999999888877765444433332221 1111 111111000000000 0 0
Q ss_pred cccccCCccccccccccccchhHHHHHHHHHHHHhhhccccccc--cceeeecccchHHHHHHHHHHHHh-hhhhhHHHH
Q 011118 242 MEQSTSMPRERESLLSHDENNAELAEKRWRWKIIDWISNAPCVG--AWQVYLKQEVVLPGVSLALLFFTV-LSFGTLMTA 318 (493)
Q Consensus 242 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~--g~~~y~~q~v~la~~alalLy~tV-L~f~~l~~~ 318 (493)
.++. +..++.++ .+..++ ..+ .++ ++++|.++..+....+.+.. ......+..
T Consensus 211 ~~~~---------------~~~~~~~~---~~~~~~-----~~~~~~~~-~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~ 266 (455)
T TIGR00892 211 LPPD---------------GSTKKLSK---KSTAEK-----INRFLDFS-LFTHRGFLVYLSGNVIMFLGFFAPIIFLVP 266 (455)
T ss_pred CCCC---------------Cccccccc---cchhhh-----hhhhcchH-HhcCchHHHHHHHHHHHHHHccchHHHHHH
Confidence 0000 00000000 000000 111 122 56788777655544444322 334456677
Q ss_pred HHHHcCCCchHHHHHHHHHHHHHHHHHHHHHHHHhhh--chhhhhHHHHHHHHHHHHHHH-HHHhhcchHHHHHHHHHHH
Q 011118 319 TLEWEGIPAYIIGIARGISATIGIAATILYPILQSRI--STLRTGLWSIWSQWFCLLICV-ASIWIHNSLVAAYMLMVGV 395 (493)
Q Consensus 319 yl~~~gls~~~iG~~r~~~av~GllgT~~~~~l~~ri--Gl~r~g~~~~~~q~~~L~~~v-~~~~~~~~~~s~~~l~~gi 395 (493)
|+.+.|+++...|.+.++.+++++.+....+++.+|. +..|.-.++... ++...+. .....+ ..+.. ....
T Consensus 267 ~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~--~~~~l~~ll~~~~~-~~~~~---~i~~ 340 (455)
T TIGR00892 267 YAKDKGVDEYEAAFLLSIIGFVDIFARPSCGLIAGLKWIRPHVQYLFSFAL--LFNGLTHLLCALAG-DYTGL---VIYC 340 (455)
T ss_pred HHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHhcccccCHHHHHHHHHHH--HHHHHHHHHHHHhc-hHHHH---HHHH
Confidence 8888999999999999999999999999999988763 333333222210 1111111 111122 12211 1122
Q ss_pred HhhhchhhhhhhhhhhhhhccCCCCcchhHHHHHHHHHHhh-HHHHHHHHHhccCCC
Q 011118 396 ATSRLGLWMFDLSVIQQMQDLVPESDRCVVGGVQNSLQSTM-DLMAYTMGIIISNPQ 451 (493)
Q Consensus 396 ~~SR~GLw~fDl~~~~l~Qe~vp~~~rG~v~gv~~sl~~~f-~l~~~~~~ii~~~p~ 451 (493)
.+..++......+..++.++.+|++++|+..|+.++.+++. .++..+.+.+....+
T Consensus 341 ~~~G~~~g~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~lg~~igp~i~G~l~~~~g 397 (455)
T TIGR00892 341 IFFGLSFGSVGALLFEVLMDLVGAQRFSSAVGLVTIVECCAVLIGPPLAGRLVDATK 397 (455)
T ss_pred HHHHHHhchHHHHHHHHHHHHhhHHHHhhHHhHHHHHHHHHHHccccceeeeehhcC
Confidence 22223444557778889999999999999999999998888 677777777766544
No 45
>PRK14995 methyl viologen resistance protein SmvA; Provisional
Probab=99.47 E-value=2.3e-10 Score=123.70 Aligned_cols=386 Identities=11% Similarity=0.061 Sum_probs=225.9
Q ss_pred hHHHHHHHHHHHHHhhHHHHHHHHHHHHHhCCCchHHHHHHHHHHHHHHHhhhccceeeecccchhHHHHHHHHHHHHHH
Q 011118 18 LTTYLYVAHFLARWGARMWEFSVGLYMISVWPDSLLFAAIYGAVESASIALFGPIVGHWVDKLTYVKVLQIWLVTQNLSF 97 (493)
Q Consensus 18 ~~~~L~~s~~lS~~Gdr~~~Fa~~L~lv~l~~~sll~~sv~gl~~~l~~llfg~~vG~~vDr~~R~~v~~~~~~~q~~~v 97 (493)
....+..+.++......+-..+.|-+..++ +.|.-.++.....-.+...++.++.|.+.||++||+++..+.+.-.+.
T Consensus 7 ~~~~~~~~~~~~~ld~tiv~~a~p~i~~~l-~~s~~~~~~~~~~~~l~~~~~~~~~G~l~D~~Grk~~l~~~~~~~~~~- 84 (495)
T PRK14995 7 TLVIIVLVYIPVAIDATVLHVAAPTLSMTL-GASGNELLWIIDIYSLVMAGMVLPMGALGDRIGFKRLLMLGGTLFGLA- 84 (495)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHh-CCCHhHHHHHHHHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHH-
Confidence 456688899999999999999999976554 556677777777778888888899999999999999998887544333
Q ss_pred HHHHHHHHHHHhhcccccchhHHHHHHHHHHHHHHHHHHhhhhhhhhhhccceEEEecCCCChhhhhhhhhHHHhHHHHH
Q 011118 98 IVAGVSVITLLFFSSLKSTNFIAFVLLVILTNISGAVGVISTLAGTILIEREWVVVISEGHPPEALTKMNSIIRRIDLTC 177 (493)
Q Consensus 98 ~~s~~~~~~~l~~~~~~~~~~~~~~~l~~~~~~~g~~~~l~~~a~~iaieRDWvv~i~~~~~~~~L~~~Na~mrriDl~~ 177 (493)
+.. . .. . .++..+.+. -.+.|+......++....+.+++. + + ++..+.++.+.......
T Consensus 85 ---~~~--~-~~----a-~~~~~li~~---r~l~G~g~~~~~~~~~~~l~~~~~----~--~-~~r~~~~g~~~~~~~~g 143 (495)
T PRK14995 85 ---SLA--A-AF----S-PTASWLIAT---RALLAIGAAMIVPATLAGIRATFT----E--E-KQRNMALGVWAAVGSGG 143 (495)
T ss_pred ---HHH--H-HH----c-CCHHHHHHH---HHHHHHHHHHHHHHHHHHHHHHcC----C--H-HHHHHHHHHHHHHHHHH
Confidence 111 1 11 1 122222211 123344444444443444334442 1 2 67899999999999999
Q ss_pred HhhhhHHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCcchhhhhhhhccCCCcccccccCC-------cc
Q 011118 178 KLLAPAITGFIISFVSLQASAMTLAIWTTVTVWVEYWLFMSVYKGIPALAESSQRRIRRSMPIDMEQSTSM-------PR 250 (493)
Q Consensus 178 ~l~gP~~~G~l~~~~s~~~a~~~i~~~n~~S~~ve~~~l~~Vy~~~p~L~~~~~~~~~~~~~~~~~~~~~~-------~~ 250 (493)
..+||.++|.+.+..|.+.... .|..-.++-..+... ..|+-+++ ++ + +.|....... ..
T Consensus 144 ~~~gp~lgg~l~~~~gwr~~f~----i~~~~~~~~~~l~~~---~l~~~~~~--~~-~---~~d~~g~~~~~~~~~~l~~ 210 (495)
T PRK14995 144 AAFGPLVGGILLEHFYWGSVFL----INVPIVLVVMGLTAR---YVPRQAGR--RD-Q---PLNLGHALMLIVAILLLVY 210 (495)
T ss_pred HHHHHHHHHHhhccCChHHHHH----HHHHHHHHHHHHHHH---hCCCCCCC--CC-C---CCChHhHHHHHHHHHHHHH
Confidence 9999999999999888776653 344333332222222 23431110 00 0 0000000000 00
Q ss_pred ccccccccccchhHHHHH-------HHHHHHHhhhc-cccccccceeeecccchHHHHHHHHHHH-HhhhhhhHHHHHHH
Q 011118 251 ERESLLSHDENNAELAEK-------RWRWKIIDWIS-NAPCVGAWQVYLKQEVVLPGVSLALLFF-TVLSFGTLMTATLE 321 (493)
Q Consensus 251 ~~~~~~~~~~~~~~~~~~-------~~~~~~~~~l~-~~~~~~g~~~y~~q~v~la~~alalLy~-tVL~f~~l~~~yl~ 321 (493)
... ....+...+....- .......++.+ ++. .-.++ .+++|.+.......+..+ ...++...+..|+.
T Consensus 211 ~~~-~~~~~~~~~~~~~~~~~~~~~~l~~f~~~e~~~~~p-~~~~~-lf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lq 287 (495)
T PRK14995 211 SAK-TALKGFLSLWVTSLTLLTGALLLGLFIRTQLAASRP-MIDMR-LFTHRIILSGVVMAMTAMITLVGFELLMAQELQ 287 (495)
T ss_pred HHH-hccccCCchHHHHHHHHHHHHHHHHHHHHHhcCCCC-CcCHH-HhCCcccHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 000 00000000000000 00000011111 011 11122 367788877776665553 33456667777888
Q ss_pred H-cCCCchHHHHHHHHHHHHHHHHHHHHHHHHhhhchhhhhHHHHHHHHHHHHHHHHHHhh-cchHHHHHHHHHHHHhhh
Q 011118 322 W-EGIPAYIIGIARGISATIGIAATILYPILQSRISTLRTGLWSIWSQWFCLLICVASIWI-HNSLVAAYMLMVGVATSR 399 (493)
Q Consensus 322 ~-~gls~~~iG~~r~~~av~GllgT~~~~~l~~riGl~r~g~~~~~~q~~~L~~~v~~~~~-~~~~~s~~~l~~gi~~SR 399 (493)
. +|+++.+.|.......++..+++.+.+++.+|+|..+.-..+.....+ ......... ..+.+. .....++..
T Consensus 288 ~v~g~s~~~ag~~~~~~~~~~~~~~~~~g~l~~r~g~~~~~~~g~~~~~~--~~~~l~~~~~~~~~~~---~~~~~~l~G 362 (495)
T PRK14995 288 FVHGLSPLEAGMFMLPVMVASGFSGPIAGILVSRLGLRLVATGGMALSAL--SFYGLAMTDFSTQQWQ---AWGLMALLG 362 (495)
T ss_pred HHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCchHHHHHHHHHHHH--HHHHHHHhcCCCchHH---HHHHHHHHH
Confidence 5 899999999999999999999999999999999975544433331111 111111111 112221 123344455
Q ss_pred chhhhhhhhhhhhhhccCCCCcchhHHHHHHHHHHhh-HHHHHHHHHhc
Q 011118 400 LGLWMFDLSVIQQMQDLVPESDRCVVGGVQNSLQSTM-DLMAYTMGIII 447 (493)
Q Consensus 400 ~GLw~fDl~~~~l~Qe~vp~~~rG~v~gv~~sl~~~f-~l~~~~~~ii~ 447 (493)
+|.-......+...|+.+|++++|+.+++.+...++. .++.-+.+.++
T Consensus 363 ~g~g~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~lG~~~G~ai~g~i~ 411 (495)
T PRK14995 363 FSAASALLASTSAIMAAAPPEKAAAAGAIETMAYELGAGLGIAIFGLLL 411 (495)
T ss_pred HhHHHHHHHHHHHHHhcCCHHhcchHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 6666667778889999999999999999999888777 66766666654
No 46
>TIGR00902 2A0127 phenyl proprionate permease family protein. This family of proteins is involved in the uptake of 3-phenylpropionic acid. This uptake mechanism is for the metabolism of phenylpropanoid compounds and plays an important role in the natural degradative cycle of these aromatic molecules.
Probab=99.45 E-value=4.1e-10 Score=117.23 Aligned_cols=349 Identities=12% Similarity=0.039 Sum_probs=200.3
Q ss_pred HHHHHHHHHHHHhhHHHHHHHHHHHHHhCCCchHHHHHHHHHHHHHHHhhhccceeeecccchhHHHHHHHHHHHHHHHH
Q 011118 20 TYLYVAHFLARWGARMWEFSVGLYMISVWPDSLLFAAIYGAVESASIALFGPIVGHWVDKLTYVKVLQIWLVTQNLSFIV 99 (493)
Q Consensus 20 ~~L~~s~~lS~~Gdr~~~Fa~~L~lv~l~~~sll~~sv~gl~~~l~~llfg~~vG~~vDr~~R~~v~~~~~~~q~~~v~~ 99 (493)
+.++.+.+.--.+..+..=-.|.++.+ +.-|...++.....-.+...+.++..|.+.||++|++..+... . ..
T Consensus 7 ~~l~~~~~~~~~~~~~~~p~l~~~l~~-~g~s~~~ig~~~s~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~-----~-~~ 79 (382)
T TIGR00902 7 RWLALGFFGYFCAYGIFLPFFPAWLKG-IGLGEEMIGLLIGAALIARFAGGLFFAPLIKDANHIIIALRLL-----A-LA 79 (382)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHH-cCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCcHHHHHHHH-----H-HH
Confidence 345555555555555555556677765 4668888888888888899999999999999998855432221 1 11
Q ss_pred HHHHHHHHHhhcccccchhHHHHHHHHHHHHHHHHHHhhhhhhhhhhccceEEEecCCCChhhhhhhhhHHHhHHHHHHh
Q 011118 100 AGVSVITLLFFSSLKSTNFIAFVLLVILTNISGAVGVISTLAGTILIEREWVVVISEGHPPEALTKMNSIIRRIDLTCKL 179 (493)
Q Consensus 100 s~~~~~~~l~~~~~~~~~~~~~~~l~~~~~~~g~~~~l~~~a~~iaieRDWvv~i~~~~~~~~L~~~Na~mrriDl~~~l 179 (493)
+... ...+.. ..++...+.... .+.+....-..+... ++-+||. ++..+.-+.+|..-.++-+
T Consensus 80 ~~l~-~~~~~~---~~~~~~~l~~~~---~l~~~~~~~~~p~~~-al~~~~~---------~~~~~~~g~~~~~~slG~~ 142 (382)
T TIGR00902 80 SAIF-AAAFSA---GAHNAWLLFIAI---GLFALFFSAGMPIGD-ALANTWQ---------KQFGLDYGKVRLIGSAAFI 142 (382)
T ss_pred HHHH-HHHHHH---hhhhHHHHHHHH---HHHHHHHccchhHHH-HHHHHHH---------HHcCCCccHHHHHHHHHHH
Confidence 1110 110110 111221111111 112222222222212 2224551 2335566778888889999
Q ss_pred hhhHHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCcchhhhhhhhccCCCcccccccCCccccccccccc
Q 011118 180 LAPAITGFIISFVSLQASAMTLAIWTTVTVWVEYWLFMSVYKGIPALAESSQRRIRRSMPIDMEQSTSMPRERESLLSHD 259 (493)
Q Consensus 180 ~gP~~~G~l~~~~s~~~a~~~i~~~n~~S~~ve~~~l~~Vy~~~p~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 259 (493)
+||.++|.+.+..|.+......... ... ..+... ..|+.+++ + + ++. +
T Consensus 143 ~g~~l~g~l~~~~g~~~~f~~~~~~----~~~--~~~~~~--~~~~~~~~---~-----~---~~~----~--------- 190 (382)
T TIGR00902 143 IGSALFGGLIGMFDEQNILAILTAG----LAF--MLIGFL--IKPTIPPK---D-----A---IPE----D--------- 190 (382)
T ss_pred HHHHHHHHHHHHcChhHHHHHHHHH----HHH--HHHHHH--cCCCCCCC---c-----c---ccc----c---------
Confidence 9999999999988876654322111 111 111111 12221100 0 0 000 0
Q ss_pred cchhHHHHHHHHHHHHhhhccccccccceeeecccchHHHHHHHHHHH-HhhhhhhHHHHHHHHcCCCchHHHHHHHHHH
Q 011118 260 ENNAELAEKRWRWKIIDWISNAPCVGAWQVYLKQEVVLPGVSLALLFF-TVLSFGTLMTATLEWEGIPAYIIGIARGISA 338 (493)
Q Consensus 260 ~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~y~~q~v~la~~alalLy~-tVL~f~~l~~~yl~~~gls~~~iG~~r~~~a 338 (493)
+. . ..+.++..+|+|.++..+...+++. ....+.+....|+++.|+++..+|.+.++++
T Consensus 191 ~~-----~---------------~~~~~~~~l~~~~~~~~l~~~~l~~~~~~~~~~~~~~~l~~~g~s~~~~g~l~~~~~ 250 (382)
T TIGR00902 191 ES-----Q---------------GDSAFIALLKNPMNLRFLAAVCLIQGAHAAYYGFSAIYWQAAGISASATGLLWGIGV 250 (382)
T ss_pred cc-----c---------------cchhHHHHHcChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHhHHHHHHHHHH
Confidence 00 0 0111233457777766666665543 3345667778899899999999999999999
Q ss_pred HHHHHHHHHHHHHHhhhchhhhhHHHHHHHHHHHHHHHHHHhhcchHHHHHHHHHHHHhhhchhhhhhhhhhhhhhccCC
Q 011118 339 TIGIAATILYPILQSRISTLRTGLWSIWSQWFCLLICVASIWIHNSLVAAYMLMVGVATSRLGLWMFDLSVIQQMQDLVP 418 (493)
Q Consensus 339 v~GllgT~~~~~l~~riGl~r~g~~~~~~q~~~L~~~v~~~~~~~~~~s~~~l~~gi~~SR~GLw~fDl~~~~l~Qe~vp 418 (493)
+.++.+.+..+++.||+|..+.-.++.....+... ...+.+ +.+. +.....+-.+..-.+-.+..+++|+. |
T Consensus 251 ~~~i~~~~~~~~l~~r~g~~~~l~~~~~~~~~~~~---~~~~~~-~~~~---~~~~q~l~g~~~~~~~~~~~~~i~~~-~ 322 (382)
T TIGR00902 251 LAEIIIFAFSNKLFQNCSARDLLLISAIACVGRWA---IIGAIE-AFPL---IFLLQILHCGTFAVCHLAAMRYIAAQ-P 322 (382)
T ss_pred HHHHHHHHHhHHHHhhCCHHHHHHHHHHHHHHHHH---HHHhHh-hHHH---HHHHHHHHHHHHHHHHHHHHHHHHhC-C
Confidence 99999999999999999988876655542221111 111122 1111 11122222233334567788899988 9
Q ss_pred CCcchhHHHHHHHHHHhh--HHHHHHHHHhccCCCC
Q 011118 419 ESDRCVVGGVQNSLQSTM--DLMAYTMGIIISNPQD 452 (493)
Q Consensus 419 ~~~rG~v~gv~~sl~~~f--~l~~~~~~ii~~~p~~ 452 (493)
+++|++..|+.+++.+.. -++..+.|.+...-+.
T Consensus 323 ~~~~~~~q~~~~~~~~g~g~~~g~~~~G~l~~~~g~ 358 (382)
T TIGR00902 323 GSEIAKLQALYNALAMGGLIAIFTAFAGFIYPTLGA 358 (382)
T ss_pred HhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccH
Confidence 999999999887665554 5678888888876653
No 47
>TIGR00890 2A0111 Oxalate/Formate Antiporter.
Probab=99.45 E-value=2.3e-10 Score=116.07 Aligned_cols=333 Identities=12% Similarity=0.014 Sum_probs=179.2
Q ss_pred HHHHHHHHHHHHhCCCchHHHHHHHHHHHHHHHhhhccceeeecccchhHHHHHHHHHHHHHHHHHHHHHHHHHhhcccc
Q 011118 35 MWEFSVGLYMISVWPDSLLFAAIYGAVESASIALFGPIVGHWVDKLTYVKVLQIWLVTQNLSFIVAGVSVITLLFFSSLK 114 (493)
Q Consensus 35 ~~~Fa~~L~lv~l~~~sll~~sv~gl~~~l~~llfg~~vG~~vDr~~R~~v~~~~~~~q~~~v~~s~~~~~~~l~~~~~~ 114 (493)
.|....|.+..+ ++-|....+.......+...+..++.|.+.||++||+++..+.+...+. +. .....
T Consensus 21 ~~~~~~~~~~~~-~~~s~~~~g~~~s~~~~~~~~~~~~~G~l~d~~G~r~~~~~~~~~~~~~----~~--~~~~~----- 88 (377)
T TIGR00890 21 TWTLLAPPLGRY-FGVGVTAVAIWFTLLLIGLAMSMPVGGLLADKFGPRAVAMLGGILYGLG----FT--FYAIA----- 88 (377)
T ss_pred hhhhHHHHHHHH-hCCCHHHHHHHHHHHHHHHHHHhhhhHHHHHHcCccchhHHhHHHHHHH----HH--HHHHH-----
Confidence 455566664443 4557888899999999999999999999999999999988776433332 11 11111
Q ss_pred cchhHHHHHHHHHHHHHHHHHHhhhhhhhhhhccceEEEecCCCChhhhhhhhhHHHhHHHHHHhhhhHHHHHHHHhhhh
Q 011118 115 STNFIAFVLLVILTNISGAVGVISTLAGTILIEREWVVVISEGHPPEALTKMNSIIRRIDLTCKLLAPAITGFIISFVSL 194 (493)
Q Consensus 115 ~~~~~~~~~l~~~~~~~g~~~~l~~~a~~iaieRDWvv~i~~~~~~~~L~~~Na~mrriDl~~~l~gP~~~G~l~~~~s~ 194 (493)
.++..+.... .+.|............. -.+|. + ++..++++.....-....+++|.+.+.+.+..|.
T Consensus 89 -~~~~~~~~~~---~~~g~~~~~~~~~~~~~-~~~~~----~----~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~ 155 (377)
T TIGR00890 89 -DSLAALYLTY---GLASAGVGIAYGIALNT-AVKWF----P----DKRGLASGIIIGGYGLGSFILSPLITSVINLEGV 155 (377)
T ss_pred -HHHHHHHHHH---HHHhHHHHHHHHhHHHH-HHHHc----C----cccHHHHHHHHHhcchhHhHHHHHHHHHHhcccH
Confidence 1222221111 12222222221111222 23454 2 2346667777666666665555555555565666
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhhcCcchhhhhhhhccCCCcccccccCCccccccccccccchhHHHHHHHHHHH
Q 011118 195 QASAMTLAIWTTVTVWVEYWLFMSVYKGIPALAESSQRRIRRSMPIDMEQSTSMPRERESLLSHDENNAELAEKRWRWKI 274 (493)
Q Consensus 195 ~~a~~~i~~~n~~S~~ve~~~l~~Vy~~~p~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 274 (493)
+....+..+...+..+.-+.++ +.|+.+ ++ + + + ++ . .+ +++
T Consensus 156 ~~~f~~~~~~~~~~~~~~~~~~-----~~~~~~----~~-~---~-~-~~----------------~-~~-~~~------ 196 (377)
T TIGR00890 156 PAAFIYMGIIFLLVIVLGAFLI-----GYPPGQ----LI-K---T-N-IE----------------V-SV-KDY------ 196 (377)
T ss_pred HHHHHHHHHHHHHHHHHHHHhe-----ecCchh----cc-c---c-C-cc----------------c-ch-hhh------
Confidence 6655444443333333222211 112100 00 0 0 0 00 0 00 000
Q ss_pred HhhhccccccccceeeecccchHHHHHHH-HHHHHhhhhhhHHHHHHHHcCCCchHHHHHHHHHHHHHHHHHHHHHHHHh
Q 011118 275 IDWISNAPCVGAWQVYLKQEVVLPGVSLA-LLFFTVLSFGTLMTATLEWEGIPAYIIGIARGISATIGIAATILYPILQS 353 (493)
Q Consensus 275 ~~~l~~~~~~~g~~~y~~q~v~la~~ala-lLy~tVL~f~~l~~~yl~~~gls~~~iG~~r~~~av~GllgT~~~~~l~~ 353 (493)
.++..+++|.++...... +.++......+....|.++.|.++...+.+.+...++++.++++.+++.+
T Consensus 197 -----------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d 265 (377)
T TIGR00890 197 -----------TVWEMLRTPQFWVLYLSFFLNAVSGLLLIGLYKPYGQSLGLSDGFLVLAVSISSIFNGGGRPFLGALSD 265 (377)
T ss_pred -----------hHHHHHcCccHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 011122334333222222 22222233444556677788999999999999999999999999999999
Q ss_pred hhchhhhhHHHHHHHHHHHHHHHHHHhhcchHHH-H--HHHHHHHHhhhchhhhhhhhhhhhhhccCCCCcchhHHHHHH
Q 011118 354 RISTLRTGLWSIWSQWFCLLICVASIWIHNSLVA-A--YMLMVGVATSRLGLWMFDLSVIQQMQDLVPESDRCVVGGVQN 430 (493)
Q Consensus 354 riGl~r~g~~~~~~q~~~L~~~v~~~~~~~~~~s-~--~~l~~gi~~SR~GLw~fDl~~~~l~Qe~vp~~~rG~v~gv~~ 430 (493)
|+|..+...++..... ...+...+.+..... . ..++.+.. .| ........+.+|..|+++||+..|..+
T Consensus 266 r~g~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~g~~---~g--~~~~~~~~~~~~~~~~~~~~~~~g~~~ 337 (377)
T TIGR00890 266 KIGRQKTMSIVFGISA---VGMAAMLFIPMLNDVLFLATVALVFFT---WG--GTISLFPSLVSDIFGPANSAANYGFLY 337 (377)
T ss_pred HHhhhhhhhHHHHHHH---HHHHHHHHcccchhHHHHHHHHHHHHH---hc--cchhccHHHHHHHhhhhhhhhHhHHHH
Confidence 9997666554443111 111111222211111 1 11112221 11 112334567889999999999999999
Q ss_pred HHHHhh-HHHHHHHHHhccCC
Q 011118 431 SLQSTM-DLMAYTMGIIISNP 450 (493)
Q Consensus 431 sl~~~f-~l~~~~~~ii~~~p 450 (493)
+.+++. -++.++.+.+...-
T Consensus 338 ~~~~~g~~~~~~~~g~l~~~~ 358 (377)
T TIGR00890 338 TAKAVAGIFGGLIASHALTEI 358 (377)
T ss_pred HHHHHHHHHHHHHHHHHHhhh
Confidence 988887 67777777776543
No 48
>PRK09528 lacY galactoside permease; Reviewed
Probab=99.45 E-value=1e-10 Score=123.12 Aligned_cols=364 Identities=11% Similarity=0.004 Sum_probs=190.5
Q ss_pred hhhHHHHHHHHHHHHHhhHHHHHHHHHHHHHhCCCchHHHHHHHHHHHHHHHhhhccceeeecccchhHHHHHHHHHHHH
Q 011118 16 SFLTTYLYVAHFLARWGARMWEFSVGLYMISVWPDSLLFAAIYGAVESASIALFGPIVGHWVDKLTYVKVLQIWLVTQNL 95 (493)
Q Consensus 16 ~~~~~~L~~s~~lS~~Gdr~~~Fa~~L~lv~l~~~sll~~sv~gl~~~l~~llfg~~vG~~vDr~~R~~v~~~~~~~q~~ 95 (493)
++.++.++...++-..+--++.=-.|.++.+-++-|....++......+...+++++.|.+.||.+|||++..+..+-.+
T Consensus 9 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~s~~~~g~~~s~~~l~~~i~~~~~G~l~Dr~g~r~~~~~~~~~~~~ 88 (420)
T PRK09528 9 NPNYWIFSLFFFFFFFIWSSWFSFFPIWLHDINGLSGTDTGIIFSANSLFALLFQPLYGLISDKLGLKKHLLWIISGLLV 88 (420)
T ss_pred CcchHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCchHHHHHHHHHHHH
Confidence 35788888888888887777777777777776777999999999999999999999999999999999998665422111
Q ss_pred HHHHHHHHHHHHHhhcccccchhHHHHHHHHHHHHHHHHHHhhhhhhhhhhccceEEEecCCCChhhhhhhhhHHHhHHH
Q 011118 96 SFIVAGVSVITLLFFSSLKSTNFIAFVLLVILTNISGAVGVISTLAGTILIEREWVVVISEGHPPEALTKMNSIIRRIDL 175 (493)
Q Consensus 96 ~v~~s~~~~~~~l~~~~~~~~~~~~~~~l~~~~~~~g~~~~l~~~a~~iaieRDWvv~i~~~~~~~~L~~~Na~mrriDl 175 (493)
. ... ........ .......+. .+ +.+.....+..+.... -.+|.... . ++....-...|....
T Consensus 89 ~----~~~-~~~~~~~~-~~~~~~~~~-~~----~~~~~~~~~~~~~~~~-~~~~~~~~----~-~~~g~~~g~~~~~~~ 151 (420)
T PRK09528 89 L----FGP-FFIYVFAP-LLQYNILLG-AI----VGGIYLGFGFLAGAGA-IEAYIERV----S-RRSGFEYGRARMWGS 151 (420)
T ss_pred H----HHH-HHHHHHHH-HHHHHHHHH-HH----HHHHHhhhhhccchhh-hhhHHHHH----H-hhccccchhhHHhhh
Confidence 1 000 00000000 000000110 11 0111111111111112 23343111 1 122223356677788
Q ss_pred HHHhhhhHHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCcchhhhhhhhccCCCcccccccCCccccccc
Q 011118 176 TCKLLAPAITGFIISFVSLQASAMTLAIWTTVTVWVEYWLFMSVYKGIPALAESSQRRIRRSMPIDMEQSTSMPRERESL 255 (493)
Q Consensus 176 ~~~l~gP~~~G~l~~~~s~~~a~~~i~~~n~~S~~ve~~~l~~Vy~~~p~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 255 (493)
++..+||.++|.+... +.+.... ...+..++-.... +...|+.+++.+.+ + + ++.
T Consensus 152 ~g~~i~~~~~g~l~~~-~~~~~f~----~~~~~~~~~~~~~---~~~~~~~~~~~~~~-~---~---~~~---------- 206 (420)
T PRK09528 152 LGWALCAFIAGILFNI-NPQINFW----LGSGSALILLVLL---FFAKPDAPSTAKVA-N---A---LGA---------- 206 (420)
T ss_pred HHHHHHHHHHHHHHhc-CchHhHH----HHHHHHHHHHHHH---hcccccccchhhhc-c---c---hhc----------
Confidence 8999999999999763 4433222 1222222211111 11222211100000 0 0 000
Q ss_pred cccccchhHHHHHHHHHHHHhhhccccccccceeeecccchHHHHHHHHHH-HHhhhhhhHHHHHHH----HcCCCchHH
Q 011118 256 LSHDENNAELAEKRWRWKIIDWISNAPCVGAWQVYLKQEVVLPGVSLALLF-FTVLSFGTLMTATLE----WEGIPAYII 330 (493)
Q Consensus 256 ~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~y~~q~v~la~~alalLy-~tVL~f~~l~~~yl~----~~gls~~~i 330 (493)
+.... . .+.++..++||.++..+...+.. +..-.++..+..|+. +.+.+...+
T Consensus 207 ----~~~~~--~----------------~~~~~~~l~~~~~~~l~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 264 (420)
T PRK09528 207 ----NASAV--S----------------LKDALALLKLPKFWFLVLYVIGVACFYDVFDQQFPNFFASFFATPEQGTRVF 264 (420)
T ss_pred ----ccccc--c----------------HHHHHHHccCCCeEeehHHHHHHHHHHHHHHHHHHHHHHHHHhccCcchHHH
Confidence 00000 0 01112234555544333222222 111123334555554 347788899
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhhhchhhhhHHHHHHHHHHHHHHH-HHHhhcchHHHHHHHHHHHHhhhchhhhhhhhh
Q 011118 331 GIARGISATIGIAATILYPILQSRISTLRTGLWSIWSQWFCLLICV-ASIWIHNSLVAAYMLMVGVATSRLGLWMFDLSV 409 (493)
Q Consensus 331 G~~r~~~av~GllgT~~~~~l~~riGl~r~g~~~~~~q~~~L~~~v-~~~~~~~~~~s~~~l~~gi~~SR~GLw~fDl~~ 409 (493)
|.+.++..+....+.+..+++.+|+|..|...++... ...+. ...+.+++ +... ....+..++.-.+..+.
T Consensus 265 g~~~~~~~~~~~~~~~~~g~l~dr~g~~~~~~~~~~l----~~~~~~l~~~~~~~-~~~~---~~~~l~g~~~~~~~~~~ 336 (420)
T PRK09528 265 GYLNSFQVFLEALIMFFAPFIINRIGAKNALLLAGTI----MAVRIIGSGFATGP-LEVS---ILKLLHAFEVPFLLVGV 336 (420)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhCcchhhHHHHHH----HHHHHHHHHhcccH-HHHH---HHHHHHHHHHHHHHHHH
Confidence 9999999999999999999999999988765544431 11111 11223322 2111 11222223333445566
Q ss_pred hhhhhccCCCCcchhHHHH-HHHHHHhh-HHHHHHHHHhccCCC
Q 011118 410 IQQMQDLVPESDRCVVGGV-QNSLQSTM-DLMAYTMGIIISNPQ 451 (493)
Q Consensus 410 ~~l~Qe~vp~~~rG~v~gv-~~sl~~~f-~l~~~~~~ii~~~p~ 451 (493)
.+++++..|++.+++..++ .++...+- -++..+.|.+.+..+
T Consensus 337 ~~~~~~~~~~~~~a~~~~~~~~~~~~lg~~ig~~~~G~l~~~~G 380 (420)
T PRK09528 337 FKYITLNFDVRLSATIYLVGFQFAKQLGAVFLSTLAGNLYDSIG 380 (420)
T ss_pred HHHHHHHcCccceeeeeeehHHHHHHHHHHHHHHHHHHHHHhhC
Confidence 7889999999999987655 33333333 566777777766543
No 49
>TIGR00883 2A0106 metabolite-proton symporter. This model represents the metabolite:H+ symport subfamily of the major facilitator superfamily (pfam00083), including citrate-H+ symporters, dicarboxylate:H+ symporters, the proline/glycine-betaine transporter ProP, etc.
Probab=99.44 E-value=2.9e-10 Score=116.13 Aligned_cols=138 Identities=14% Similarity=0.094 Sum_probs=88.9
Q ss_pred hhhhhHHHHHHH-HcCCCchHHHHHHHHHHHHHHHHHHHHHHHHhhhchhhhhHHHHHHHHHHHHHH--HHHHhhcchHH
Q 011118 310 LSFGTLMTATLE-WEGIPAYIIGIARGISATIGIAATILYPILQSRISTLRTGLWSIWSQWFCLLIC--VASIWIHNSLV 386 (493)
Q Consensus 310 L~f~~l~~~yl~-~~gls~~~iG~~r~~~av~GllgT~~~~~l~~riGl~r~g~~~~~~q~~~L~~~--v~~~~~~~~~~ 386 (493)
..+...+..|.+ ..|.++...|.......++++++..+.+++.+|+|..|....... ++...+ ....+...+
T Consensus 236 ~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~~~~~~~~~~---~~~~~~~~~~~~~~~~~-- 310 (394)
T TIGR00883 236 YLITTYLPTYLTQTLGLSANSALLVLMLSLILFFITIPLSGALSDRIGRRPVLIIFTV---LAALLAVPLLMALLDSG-- 310 (394)
T ss_pred HHHHHHHHHHHHHhcCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHhchHHHHHHHHH---HHHHHHHHHHHHHhcCC--
Confidence 345566778885 589999999999999999999999999999999997665443322 111111 111111111
Q ss_pred HHHHHHHHHHhhhchhhhhhhhhhhhhhccCCCCcchhHHHHHHHHHH-hh-HHHHHHHHHhccCCCC
Q 011118 387 AAYMLMVGVATSRLGLWMFDLSVIQQMQDLVPESDRCVVGGVQNSLQS-TM-DLMAYTMGIIISNPQD 452 (493)
Q Consensus 387 s~~~l~~gi~~SR~GLw~fDl~~~~l~Qe~vp~~~rG~v~gv~~sl~~-~f-~l~~~~~~ii~~~p~~ 452 (493)
+...+.....+..++.-.+....+.+++|.+|+++||+..|....+.+ .. -++.++.+.+...-+.
T Consensus 311 ~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~g~~~~p~~~g~l~~~~g~ 378 (394)
T TIGR00883 311 SFTLFFFLVLGLALIGGMYTGPMGSFLPELFPTEVRYTGASLAYNLAGAIFGGFAPYIAAALVAMTGD 378 (394)
T ss_pred chHHHHHHHHHHHHHHHHHhhhHHHHHHHhCCccceeeEeeehhHhHHHHHhhHHHHHHHHHHHHcCc
Confidence 111122222333344445567778999999999999999998655544 33 3667777777665443
No 50
>TIGR00792 gph sugar (Glycoside-Pentoside-Hexuronide) transporter. GPH:cation symporters catalyze uptake of sugars in symport with a monovalent cation (H+ or Na+). Members of this family includes transporters for melibiose, lactose, raffinose, glucuronides, pentosides and isoprimeverose. Mutants of two groups of these symporters (the melibiose permeases of enteric bacteria, and the lactose permease of Streptococcus thermophilus) have been isolated in which altered cation specificity is observed or in which sugar transport is uncoupled from cation symport (i.e., uniport is catalyzed). The various members of the family can use Na+, H+ or Li, Na+ or Li+, H+ or Li+, or only H+ as the symported cation. All of these proteins possess twelve putative transmembrane a-helical spanners.
Probab=99.40 E-value=6.3e-10 Score=116.94 Aligned_cols=350 Identities=15% Similarity=0.106 Sum_probs=191.8
Q ss_pred HHHHHHHhhHHHHHHHHHHHHHhCCCchHHHHHHHHHHHHHHHhhhccceeeeccc----ch-hHHHHHHHHHHHHHHHH
Q 011118 25 AHFLARWGARMWEFSVGLYMISVWPDSLLFAAIYGAVESASIALFGPIVGHWVDKL----TY-VKVLQIWLVTQNLSFIV 99 (493)
Q Consensus 25 s~~lS~~Gdr~~~Fa~~L~lv~l~~~sll~~sv~gl~~~l~~llfg~~vG~~vDr~----~R-~~v~~~~~~~q~~~v~~ 99 (493)
+++..+.-..+...-.+.++...+.-|...++..-....+...+..|.+|.+.||. .| |+.+..+.+.- ++
T Consensus 7 g~~~~~~~~~~~~~~l~~~~~~~~g~s~~~~g~i~~~~~i~~~i~~p~~G~lsDr~~~r~Grrr~~i~~~~~~~----~i 82 (437)
T TIGR00792 7 GDFGNNFIFAIVSTYLLFFYTDVLGLSAAFVGTLFLVARILDAITDPIMGNIVDRTRTRWGKFRPWLLIGAIPF----SI 82 (437)
T ss_pred chHHHHHHHHHHHHHHHHHHHHccCCCHHHHHHHHHHHHHHHHhccchheEeeecCCCCCCCcchhHHHhHHHH----HH
Confidence 44555555666665566667777777888889999999999999999999999984 33 44554443211 22
Q ss_pred HHHHHHHHHhhcccccchhHHHHHHHHHHHHHHHHHHhhhhhhhhhhccceEEEecCCCChhhhhhhhhHHHhHHHHHHh
Q 011118 100 AGVSVITLLFFSSLKSTNFIAFVLLVILTNISGAVGVISTLAGTILIEREWVVVISEGHPPEALTKMNSIIRRIDLTCKL 179 (493)
Q Consensus 100 s~~~~~~~l~~~~~~~~~~~~~~~l~~~~~~~g~~~~l~~~a~~iaieRDWvv~i~~~~~~~~L~~~Na~mrriDl~~~l 179 (493)
++.+ +...++........++.... .+.+....+.++..... .+.++.+ + ++.+++|+.-+....+..+
T Consensus 83 ~~~~--~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~al-----~~~~~~~-~-~~R~~~~~~~~~~~~~g~~ 150 (437)
T TIGR00792 83 VLVL--LFTTPDFSATGKLVYAYITY---ILLGLFYSFVNIPYWSL-----VPAITLD-P-RERESLSTFRRFGATLGGL 150 (437)
T ss_pred HHHH--HHhCCCCCcchHHHHHHHHH---HHHHHHHHhhcccHhhC-----cccccCC-H-HHHHHHHHHHHHHHHHHHH
Confidence 2221 11222110111111211111 12334444444432222 4555443 3 5678888887777777777
Q ss_pred hhhHHHHHHHHhh-------hhHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCcchhhhhhhhccCCCcccccccCCcccc
Q 011118 180 LAPAITGFIISFV-------SLQASAMTLAIWTTVTVWVEYWLFMSVYKGIPALAESSQRRIRRSMPIDMEQSTSMPRER 252 (493)
Q Consensus 180 ~gP~~~G~l~~~~-------s~~~a~~~i~~~n~~S~~ve~~~l~~Vy~~~p~L~~~~~~~~~~~~~~~~~~~~~~~~~~ 252 (493)
+++.+++.+.... +.+....+.++.-.+..+ ++ +...||..+ +. + + ++ +
T Consensus 151 l~~~~~~~l~~~~~~~~~~~g~~~~~~i~~~l~~~~~~---~~----~~~~~e~~~---~~-----~-~-~~-----~-- 206 (437)
T TIGR00792 151 LVAVIVLPLVSYFGGGDDKFGWFMFALVLALIGVVSLI---IC----FFGTKERYS---EI-----P-K-NI-----E-- 206 (437)
T ss_pred HHHHHHHHHHHHhCCCcccccHHHHHHHHHHHHHHHHH---HH----HcCCEecCC---CC-----C-c-cc-----c--
Confidence 7777777776533 333333322222222221 11 112332110 00 0 0 00 0
Q ss_pred ccccccccchhHHHHHHHHHHHHhhhccccccccceeeecccchHHHHHHHHHHHHh-hhhhhHHHHHHHH-cCCCchHH
Q 011118 253 ESLLSHDENNAELAEKRWRWKIIDWISNAPCVGAWQVYLKQEVVLPGVSLALLFFTV-LSFGTLMTATLEW-EGIPAYII 330 (493)
Q Consensus 253 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~y~~q~v~la~~alalLy~tV-L~f~~l~~~yl~~-~gls~~~i 330 (493)
++.+ .++.++..+++|.++..+...+++... ..+.....-|.+. .| ++...
T Consensus 207 -------~~~~-------------------~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~ 259 (437)
T TIGR00792 207 -------KKLS-------------------LKQIFKALFKNDQLLILCLAYLFYNLAFNIKNGVQVYYFTYVLG-DPELF 259 (437)
T ss_pred -------cCCC-------------------HHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHcchhheeEeeecC-ChHHH
Confidence 0000 123344456777777666555555332 2233344445443 45 56778
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhhhchhhhhHHHHHHHHHHHHHHHHHHhhcchHHHHHHHHHHHHhhhchhhhhhhhhh
Q 011118 331 GIARGISATIGIAATILYPILQSRISTLRTGLWSIWSQWFCLLICVASIWIHNSLVAAYMLMVGVATSRLGLWMFDLSVI 410 (493)
Q Consensus 331 G~~r~~~av~GllgT~~~~~l~~riGl~r~g~~~~~~q~~~L~~~v~~~~~~~~~~s~~~l~~gi~~SR~GLw~fDl~~~ 410 (493)
+.+.++..+++++++.+.+++.+|+|..++-.++... +....+...+.+.+. ..+....++..+|.-.......
T Consensus 260 ~~~~~~~~i~~ii~~~~~~~l~~r~g~~~~~~~~~~~---~~~~~~~~~~~~~~~---~~~~~~~~~~g~~~~~~~~~~~ 333 (437)
T TIGR00792 260 SYMGSIAIVAGLIGVLLFPRLVKKFGRKILFAGGILL---MVLGYLIFFFAGSNL---PLILVLIILAGFGQNFVTGLVW 333 (437)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhCcHHHHHHHHHH---HHHHHHHHHHcchhH---HHHHHHHHHHHHHHHHHHHHHH
Confidence 8888889999999999999999999987776655432 111111212222121 1222233333455555566677
Q ss_pred hhhhccCC-------CCcchhHHHHHHHHHHhh-HHHHHHHHHhc
Q 011118 411 QQMQDLVP-------ESDRCVVGGVQNSLQSTM-DLMAYTMGIII 447 (493)
Q Consensus 411 ~l~Qe~vp-------~~~rG~v~gv~~sl~~~f-~l~~~~~~ii~ 447 (493)
.++++.+| ++.+|+.+|+.+..+++. .++..+.+.+.
T Consensus 334 ~~~~~~~~~~~~~~~~~~~G~~~~~~~~~~~~g~~lg~~i~g~ll 378 (437)
T TIGR00792 334 ALVADTVDYGEWKTGVRAEGLVYSVRTFVRKLGQALAGFLVGLIL 378 (437)
T ss_pred HHHhhhhhhhhhhcCccchHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 77777765 456899999998888877 67777777664
No 51
>TIGR00879 SP MFS transporter, sugar porter (SP) family. This model represent the sugar porter subfamily of the major facilitator superfamily (pfam00083)
Probab=99.38 E-value=9.1e-11 Score=122.69 Aligned_cols=386 Identities=10% Similarity=-0.044 Sum_probs=184.3
Q ss_pred HHHHHHHhhHHHHHHHHHHHHHhCC-------CchHHHHHHHHHHHHHHHhhhccceeeecccchhHHHHHHHHHHHHHH
Q 011118 25 AHFLARWGARMWEFSVGLYMISVWP-------DSLLFAAIYGAVESASIALFGPIVGHWVDKLTYVKVLQIWLVTQNLSF 97 (493)
Q Consensus 25 s~~lS~~Gdr~~~Fa~~L~lv~l~~-------~sll~~sv~gl~~~l~~llfg~~vG~~vDr~~R~~v~~~~~~~q~~~v 97 (493)
+.++..++.-....+.|.......- .+....+.......+...+.+++.|.+.||++||+++..+.+...+.
T Consensus 36 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~g~l~d~~grr~~~~~~~~~~~~~- 114 (481)
T TIGR00879 36 GGLMFGYDTGVIGGALALPAFEFKFTSANSDSYSSSLWGLVVSIFLVGGFIGALFAGWLSDRFGRKKSLLIIALLFVIG- 114 (481)
T ss_pred HHHhcccccchhhhhhhcHHHHHhcCCcccCCCChhHHHHHHHHHHHHHHHHHHHhhHhhhhhhhHHHHHHHHHHHHHH-
Confidence 3344444555555566654444322 22567788888899999999999999999999999988876544333
Q ss_pred HHHHHHHHHHHhhcccccchhHHHHHHHHHHHHHHHHHHhhhhhhhhhhccceEEEecCCCChhhhhhhhhHHHhHHHHH
Q 011118 98 IVAGVSVITLLFFSSLKSTNFIAFVLLVILTNISGAVGVISTLAGTILIEREWVVVISEGHPPEALTKMNSIIRRIDLTC 177 (493)
Q Consensus 98 ~~s~~~~~~~l~~~~~~~~~~~~~~~l~~~~~~~g~~~~l~~~a~~iaieRDWvv~i~~~~~~~~L~~~Na~mrriDl~~ 177 (493)
+.+ ..... ...+...+... -.+.|.......+... +.-.||. .+ ++..+.++.....-.+.
T Consensus 115 ---~~~--~~~~~---~~~~~~~~~~~---r~l~G~~~~~~~~~~~-~~i~~~~----~~---~~r~~~~~~~~~~~~~G 175 (481)
T TIGR00879 115 ---AIL--MGLAA---FALSVEMLIVG---RVLLGIGVGIASALVP-MYLSEIA----PK---ALRGALTSLYQLAITFG 175 (481)
T ss_pred ---HHH--HHHhc---cccchHHHHHH---HHHHHhhhhHHHhHHH-HHHHccC----Ch---hhhhhhhhHHHHHHHHH
Confidence 221 11111 11111111111 1223333333333322 2334555 22 45677788887778888
Q ss_pred HhhhhHHH---HHHHHhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCcchhhhhhhhccCC-CcccccccCCccccc
Q 011118 178 KLLAPAIT---GFIISFVSLQASAMTLAIWTTVTVWVEYWLFMSVYKGIPALAESSQRRIRRSM-PIDMEQSTSMPRERE 253 (493)
Q Consensus 178 ~l~gP~~~---G~l~~~~s~~~a~~~i~~~n~~S~~ve~~~l~~Vy~~~p~L~~~~~~~~~~~~-~~~~~~~~~~~~~~~ 253 (493)
.+++|.++ +......+.+....+....-.+.. .+.. ..|+.......+..+++ .+...+..+.
T Consensus 176 ~~~~~~~~~~~~~~~~~~~w~~~f~~~~~~~~~~~----~~~~----~l~~~~~~~~~~~~~~~~~~~~~~~~~~----- 242 (481)
T TIGR00879 176 ILVAYGFGSGKVSLNNTLGWRIPLGLQLIPAGLLF----LGLF----FLPESPRWLVGKGRVEEARKSLARLRGT----- 242 (481)
T ss_pred HHHHHHHHHHhhcCCCCccHHHHHHHHHHHHHHHH----HHHh----cCCCChHHHHHcCChHHHHHHHHHHhCC-----
Confidence 88888888 555455666655433222211111 1111 12321110000000000 0000000000
Q ss_pred cccccccchhHHHHHHHHHHHHhhhccccccccceeeec------ccchHHHHHHHHHHHHhh-hhhhHHHHHHHHcCCC
Q 011118 254 SLLSHDENNAELAEKRWRWKIIDWISNAPCVGAWQVYLK------QEVVLPGVSLALLFFTVL-SFGTLMTATLEWEGIP 326 (493)
Q Consensus 254 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~y~~------q~v~la~~alalLy~tVL-~f~~l~~~yl~~~gls 326 (493)
.+++....+..+....+...+... ....|+..++ .+.+...+...+.++... .+......++.+.|++
T Consensus 243 ---~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~ 317 (481)
T TIGR00879 243 ---SGEDKELLDELELIDIKRSIEKRS--VQPSWGSLFSSTRRIRRRLFLGVVLQWFQQFTGINAIMYYSPTIFENAGVS 317 (481)
T ss_pred ---CCCcHHHHHHHHHHHHHHHHHHhh--ccccHHHHHhcCchhHHHHHHHHHHHHHHHHhCCeehHHHHHHHHHHcCCC
Confidence 000000000000000000000000 0111222222 222222222222222211 1233344455578999
Q ss_pred chHHHHHHHHHHHHHHHHHHHHHHHHhhhchhhhhHHHHHHHHHHHHHHHHHHhhcchH-----HHHHHHHHHHHhhhch
Q 011118 327 AYIIGIARGISATIGIAATILYPILQSRISTLRTGLWSIWSQWFCLLICVASIWIHNSL-----VAAYMLMVGVATSRLG 401 (493)
Q Consensus 327 ~~~iG~~r~~~av~GllgT~~~~~l~~riGl~r~g~~~~~~q~~~L~~~v~~~~~~~~~-----~s~~~l~~gi~~SR~G 401 (493)
+...+.......++++.++++.+++.+|+|..+...++.....++........+...+. ....+........-+|
T Consensus 318 ~~~~~~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 397 (481)
T TIGR00879 318 TDHAFLVSIIVGAVNFAFTFVAIFLVDRFGRRPLLLIGAAGMAICLFVLGILGASFVTGSSKSSGNVAIVFILLFIAFFA 397 (481)
T ss_pred chHHHHHHHHHHHHHHHHHHHHHHHHHHhcchHHHHHHHHHHHHHHHHHHHHhhcccCCcccchhHHHHHHHHHHHHHHH
Confidence 98889999999999999999999999999977766555442222221111111111110 1111111111111111
Q ss_pred hhhhhhhhhhhhhccCCCCcchhHHHHHHHHHHhh-HHHHHHHHHhccC
Q 011118 402 LWMFDLSVIQQMQDLVPESDRCVVGGVQNSLQSTM-DLMAYTMGIIISN 449 (493)
Q Consensus 402 Lw~fDl~~~~l~Qe~vp~~~rG~v~gv~~sl~~~f-~l~~~~~~ii~~~ 449 (493)
.++......+.+|..|+++||+..|+.+...++. -++..+.+.+...
T Consensus 398 -~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~lg~~i~~~~~~~~~~~ 445 (481)
T TIGR00879 398 -MGWGPVPWVIVSEIFPLSLRPKGISIAVAANWLANFIVGFLFPTMLES 445 (481)
T ss_pred -ccccCeehhhhhccCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 1223444556689999999999999999988887 4555566666554
No 52
>TIGR02718 sider_RhtX_FptX siderophore transporter, RhtX/FptX family. RhtX from Sinorhizobium meliloti 2011 and FptX from Pseudomonas aeruginosa appear to be single polypeptide transporters, from the major facilitator family (see pfam07690) for import of siderophores as a means to import iron. This function was suggested by proximity to siderophore biosynthesis genes and then confirmed by study of knockout and heterologous expression phenotypes.
Probab=99.34 E-value=1e-08 Score=106.72 Aligned_cols=347 Identities=14% Similarity=0.010 Sum_probs=181.5
Q ss_pred HHHHHhhHHHHHHHHHHHHHhCCCchHHHHHHH--HHHHHHHHhhhccceee-ecccchhHHHHHHHHHHHHHHHHHHHH
Q 011118 27 FLARWGARMWEFSVGLYMISVWPDSLLFAAIYG--AVESASIALFGPIVGHW-VDKLTYVKVLQIWLVTQNLSFIVAGVS 103 (493)
Q Consensus 27 ~lS~~Gdr~~~Fa~~L~lv~l~~~sll~~sv~g--l~~~l~~llfg~~vG~~-vDr~~R~~v~~~~~~~q~~~v~~s~~~ 103 (493)
+.+=..-.++.-.+|.++.+. .-|.-..++++ ..-.....+.+|+++++ .||.+|||..+.. .|.+. ++ +..
T Consensus 11 ~~~g~~~~~~~p~lp~~l~~~-g~~~~~iGl~~~~~l~~~~~~l~~p~~~~~~~~~~g~r~~~i~~--~~~~~-~~-~~~ 85 (390)
T TIGR02718 11 LSQGIPIGLAMDALPTLLRED-GAPLTALAFLPLVGLPWVVKFLWAPLVDNWWSWRLGRRRSWVLP--MQCLV-SA-CLA 85 (390)
T ss_pred HHHHhHHHHHHHHHHHHHHHc-CCCHHHHHHHHHHHHHHHHHHHHHHHHhccccccCCcchhHHHH--HHHHH-HH-HHH
Confidence 444455677888889988876 45777778875 34488888999999774 7888888875444 23322 11 111
Q ss_pred HHHHHhhcccccchhHHHHHHHHHHHHHHHHHHhhhhhhhhhhccceEEEecCCCChhhhhhhhhHHHhHHHHHHhhhhH
Q 011118 104 VITLLFFSSLKSTNFIAFVLLVILTNISGAVGVISTLAGTILIEREWVVVISEGHPPEALTKMNSIIRRIDLTCKLLAPA 183 (493)
Q Consensus 104 ~~~~l~~~~~~~~~~~~~~~l~~~~~~~g~~~~l~~~a~~iaieRDWvv~i~~~~~~~~L~~~Na~mrriDl~~~l~gP~ 183 (493)
.+.... . ......++..+.. +.+......+++.+.. ..||. ++ ++....|+...---....++|+.
T Consensus 86 -~~~~~~-~-~~~~~~~~~~~~~---~~~~~~a~~d~~~d~~-~~~~~----~~---~~~~~~~~~~~~g~~lG~~~g~~ 151 (390)
T TIGR02718 86 -SLALVG-P-DVAGAGWAVGLLA---CASLASATQDIATDGM-AAEHF----NG---RTLAKGNAVQIAGVMIGFFGGGA 151 (390)
T ss_pred -HHHcCC-c-chhhHHHHHHHHH---HHHHHHHHHHHHHHHH-HHHhC----CH---hhhhHHHHHHHHHHHHHHHHHHH
Confidence 111111 1 1111112211111 1112222223322211 11121 11 34455555543333455566666
Q ss_pred HHHHHHHhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCcchhhhhhhhccCCCcccccccCCccccccccccccchh
Q 011118 184 ITGFIISFVSLQASAMTLAIWTTVTVWVEYWLFMSVYKGIPALAESSQRRIRRSMPIDMEQSTSMPRERESLLSHDENNA 263 (493)
Q Consensus 184 ~~G~l~~~~s~~~a~~~i~~~n~~S~~ve~~~l~~Vy~~~p~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 263 (493)
..|.+.+..|.+....+.++...+..+.-+ . ..|+..+ + + ++ + .
T Consensus 152 ~~~~l~~~~gw~~~f~~~a~l~~~~~~~~~----~---~~~~~~~----~-----~---~~-----~------------~ 195 (390)
T TIGR02718 152 GTLVLFGKFGQRPAFLLVACVPLASLVCVL----W---LKDRAVA----S-----P---EA-----P------------L 195 (390)
T ss_pred HHHHHHHHhCHHHHHHHHHHHHHHHHHHHH----H---cCCCCcC----c-----c---cc-----c------------h
Confidence 666777778877766555554444333311 1 1111000 0 0 00 0 0
Q ss_pred HHHHHHHHHHHHhhhccccccccceeeecccchHHHHHHHHHHHH-hhhhhhHHHHHHHHcCCCchHHHHHHHHHH-HHH
Q 011118 264 ELAEKRWRWKIIDWISNAPCVGAWQVYLKQEVVLPGVSLALLFFT-VLSFGTLMTATLEWEGIPAYIIGIARGISA-TIG 341 (493)
Q Consensus 264 ~~~~~~~~~~~~~~l~~~~~~~g~~~y~~q~v~la~~alalLy~t-VL~f~~l~~~yl~~~gls~~~iG~~r~~~a-v~G 341 (493)
. . ...++..+|+|.++..+...+++.. .....+....|++++|+++..+|...+... +.+
T Consensus 196 ~--~----------------~~~~~~~l~~~~~~~~~~~~~l~~~~~~~~~~~~~~~l~~~G~s~~~ig~~~~~~~~~~~ 257 (390)
T TIGR02718 196 A--R----------------RASLFRFFRRPLAWSLLALALLSAMTAVSGFGLSKLYLVDAGWPLEWIGRLGMAGGAVTV 257 (390)
T ss_pred h--h----------------HHHHHHHHcCcCHHHHHHHHHHHHHHHHHHHHHhhHHHHhcCCCHHHHHHHHhHHHHHHH
Confidence 0 0 0112234566767766666666643 334445667889999999999999998876 467
Q ss_pred HHHHHHHHHHHhhhchhhhhHHHHHHHHHHHHHHHH-H-HhhcchHHHHHHHHHHHHhhhchhhhhhhhhhhh-hhccCC
Q 011118 342 IAATILYPILQSRISTLRTGLWSIWSQWFCLLICVA-S-IWIHNSLVAAYMLMVGVATSRLGLWMFDLSVIQQ-MQDLVP 418 (493)
Q Consensus 342 llgT~~~~~l~~riGl~r~g~~~~~~q~~~L~~~v~-~-~~~~~~~~s~~~l~~gi~~SR~GLw~fDl~~~~l-~Qe~vp 418 (493)
+.|.++.+++.+|+|..|...++...+.+....... . .+.......... ...+..++.-......... ++...|
T Consensus 258 ~~g~~~~g~l~~r~g~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~g~~~~~~~~~~~~~~~~ 334 (390)
T TIGR02718 258 LLGCGGGAWLVRRAGLWRTFILGVGLAGSLALLWFAQAAFWLAPGIAVAWS---CSAFGSLITGITSVAIYTAFMRFAGD 334 (390)
T ss_pred HHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHcccCCcHHHHHH---HHHHHHHHHHHHHHHHHHHHHHHhCc
Confidence 788999999999999888776655433211111111 1 111111111111 1111111111112222333 333334
Q ss_pred CCcchhHHHHHHHHHHhh-HHHHHHHHHhccC
Q 011118 419 ESDRCVVGGVQNSLQSTM-DLMAYTMGIIISN 449 (493)
Q Consensus 419 ~~~rG~v~gv~~sl~~~f-~l~~~~~~ii~~~ 449 (493)
++++|+..+..+++.++. -++..+.|.+...
T Consensus 335 ~~~~g~~~~~~~~~~~lg~~~g~~~~G~l~~~ 366 (390)
T TIGR02718 335 GDQAGTDVTAVQSTRDLGELIASSIAGYLTDR 366 (390)
T ss_pred ccchHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 489999999999998887 7777888877653
No 53
>TIGR00889 2A0110 nucleoside transporter. This family of proteins transports nucleosides at a high affinity. The transport mechanism is driven by proton motive force. This family includes nucleoside permease NupG and xanthosine permease from E.Coli.
Probab=99.34 E-value=2.5e-09 Score=113.22 Aligned_cols=184 Identities=14% Similarity=0.060 Sum_probs=110.5
Q ss_pred eecccchHHHHHHHHHHHHhh-hhhhHHHHHHHHcCCCc--------hHHHHHHHHHHHHHHHHHHHHHHHHhhhchhhh
Q 011118 290 YLKQEVVLPGVSLALLFFTVL-SFGTLMTATLEWEGIPA--------YIIGIARGISATIGIAATILYPILQSRISTLRT 360 (493)
Q Consensus 290 y~~q~v~la~~alalLy~tVL-~f~~l~~~yl~~~gls~--------~~iG~~r~~~av~GllgT~~~~~l~~riGl~r~ 360 (493)
..|+|.+...+...++..... ........|..+.|.++ ...|...++..+.++.+.+..+++.+|+|..+.
T Consensus 204 ~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~g~~~~~~~i~~i~~~~~~g~l~dr~g~r~~ 283 (418)
T TIGR00889 204 LFKNKRMAIFFFFSMLLGAPLQITNIFGNGFLHEFGRNPEFADSFVVKNASIWMSLSQFSEIFFILTIPFFLKRFGIKKV 283 (418)
T ss_pred HhcCCCeeeHHHHHHHHHhHHHHHHHhHHHHHHHhcccccccchhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHhCcHHH
Confidence 345665554444444432221 22234456776666554 788999999999999999999999999998877
Q ss_pred hHHHHHHHHHHHHHHHHHHhhcchHHHHHHHHHHHHhhhchhhhhhhhhhhhhhccCCCCcchhHHHHHHH-HHHhh-HH
Q 011118 361 GLWSIWSQWFCLLICVASIWIHNSLVAAYMLMVGVATSRLGLWMFDLSVIQQMQDLVPESDRCVVGGVQNS-LQSTM-DL 438 (493)
Q Consensus 361 g~~~~~~q~~~L~~~v~~~~~~~~~~s~~~l~~gi~~SR~GLw~fDl~~~~l~Qe~vp~~~rG~v~gv~~s-l~~~f-~l 438 (493)
..++.....++. ++. ....+.......+..+.++..++.-.+..+...++.|..|+++||+..|..+. .+.+. -+
T Consensus 284 l~~~~~~~~v~~--~l~-~~~~~~~~~~~~l~l~~~l~g~~~~~~~~~~~~~i~~~~p~~~~g~~~g~~~~~~~~lg~~i 360 (418)
T TIGR00889 284 MLLSLVAWALRF--GFF-AYGDPEYFGYALLFLSMIVYGCAFDFFNISGSVFVEKEVPVHIRASAQGLFTLMCNGFGSLL 360 (418)
T ss_pred HHHHHHHHHHHH--HHH-HHcCcchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHhhHHHH
Confidence 666554221111 111 11111122223333334444444445577888899999999999999999974 44434 67
Q ss_pred HHHHHHHhccCCCC---chH--HHHHHHHHHHHHHHHHHHHHH
Q 011118 439 MAYTMGIIISNPQD---FWK--LILISVIVVTLAAILYTFHLY 476 (493)
Q Consensus 439 ~~~~~~ii~~~p~~---F~~--l~~~S~~~V~~~~~l~~~~~~ 476 (493)
+..+.|.+.+..+. ++| .+.+.......+..++..+.+
T Consensus 361 Gp~l~G~l~~~~g~~~~~~~~~~f~~~~~~~~i~~~l~~~~~~ 403 (418)
T TIGR00889 361 GYILSGVMVEKMFAYGTFDWQTMWLFFAGYIAILAVLFMIFFK 403 (418)
T ss_pred HHHHHHHHHHHhccccCCchHHHHHHHHHHHHHHHHHHHHHhC
Confidence 77888888776443 333 344444444444444444444
No 54
>PRK03699 putative transporter; Provisional
Probab=99.33 E-value=1e-08 Score=107.11 Aligned_cols=361 Identities=12% Similarity=0.058 Sum_probs=193.8
Q ss_pred hhHHHHHHHHHHHHHhhHHHHHHHHHHHHHhCCCchHHHHHHHHHHHHHHHhhhccceeeecccchhHHHHHHHHHHHHH
Q 011118 17 FLTTYLYVAHFLARWGARMWEFSVGLYMISVWPDSLLFAAIYGAVESASIALFGPIVGHWVDKLTYVKVLQIWLVTQNLS 96 (493)
Q Consensus 17 ~~~~~L~~s~~lS~~Gdr~~~Fa~~L~lv~l~~~sll~~sv~gl~~~l~~llfg~~vG~~vDr~~R~~v~~~~~~~q~~~ 96 (493)
|.++..+.+.++...-..+.....|-+.. -++-|....+.......+...+..++.|.+.||++|||++..+.+...+.
T Consensus 7 ~~~~~~~~~~~~~~~~~~~~g~~~~~i~~-~~~~s~~~~g~~~s~~~~~~~i~~~~~g~l~dr~g~r~~~~~~~~~~~i~ 85 (394)
T PRK03699 7 KLTWISFLSYALTGALVIVTGMVMGPIAE-YFNLPVSSMSNTFTFLNAGILISIFLNAWLMEIIPLKRQLIFGFALMILA 85 (394)
T ss_pred HHHHHHHHHHHHHHHHHHHHhhhhHHHHH-HhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHH
Confidence 45667777777776666667777777554 45657778888888888889999999999999999999988776443332
Q ss_pred HHHHHHHHHHHHhhcccccchhHHHHHHHHHHHHHHHHHHhhhhhhhhhhccceEEEecCCCChhhhhhhhhHHHhHHHH
Q 011118 97 FIVAGVSVITLLFFSSLKSTNFIAFVLLVILTNISGAVGVISTLAGTILIEREWVVVISEGHPPEALTKMNSIIRRIDLT 176 (493)
Q Consensus 97 v~~s~~~~~~~l~~~~~~~~~~~~~~~l~~~~~~~g~~~~l~~~a~~iaieRDWvv~i~~~~~~~~L~~~Na~mrriDl~ 176 (493)
+.+ . .. . .++..+.... .+.|.......+.....+ -||. ++ ++....+......-..
T Consensus 86 ----~~l--~-~~----~-~~~~~~~~~~---~l~G~~~g~~~~~~~~~i-~~~~----~~---~~r~~~~~~~~~~~~~ 142 (394)
T PRK03699 86 ----VAG--L-MF----S-HSLALFSIAM---FVLGVVSGITMSIGTFLI-THVY----EG---KQRGSRLLFTDSFFSM 142 (394)
T ss_pred ----HHH--H-HH----c-chHHHHHHHH---HHHHHhhHhhccchhHHh-hhhc----cc---chHHHHHHHHHHHHHH
Confidence 111 1 11 1 1222221111 122333332222222221 1222 22 2233444444444456
Q ss_pred HHhhhhHHHHHHHH-hhhhHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCcchhhhhhhhccCCCcccccccCCccccccc
Q 011118 177 CKLLAPAITGFIIS-FVSLQASAMTLAIWTTVTVWVEYWLFMSVYKGIPALAESSQRRIRRSMPIDMEQSTSMPRERESL 255 (493)
Q Consensus 177 ~~l~gP~~~G~l~~-~~s~~~a~~~i~~~n~~S~~ve~~~l~~Vy~~~p~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 255 (493)
.-.++|.+.+.++. ..|.+....+..+...+..+ +. .+.+.|++.++ + + ++
T Consensus 143 g~~~~~~~~~~l~~~~~gw~~~f~~~~~~~~~~~~----~~--~~~~~p~~~~~---~-----~---~~----------- 194 (394)
T PRK03699 143 AGMIFPIIAAYLLARSIEWYWVYACIGLVYVAIFI----LT--LFSEFPALGKH---A-----P---KA----------- 194 (394)
T ss_pred HHHHHHHHHHHHHhccccHHHHHHHHHHHHHHHHH----HH--HhcCCcccccc---C-----c---cc-----------
Confidence 67888999888765 45777665443443333221 11 12233432100 0 0 00
Q ss_pred cccccchhHHHHHHHHHHHHhhhccccccccceeeecccchHHHHHHHHHHHHh-hhhhhHHHHHHHH-cCCCchHHHHH
Q 011118 256 LSHDENNAELAEKRWRWKIIDWISNAPCVGAWQVYLKQEVVLPGVSLALLFFTV-LSFGTLMTATLEW-EGIPAYIIGIA 333 (493)
Q Consensus 256 ~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~y~~q~v~la~~alalLy~tV-L~f~~l~~~yl~~-~gls~~~iG~~ 333 (493)
+.. + .++.| +|.++......++|+.. .++.+.+..|+++ .|+++.+.|.+
T Consensus 195 -----~~~---~---------------~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~p~~l~~~~g~s~~~~~~~ 246 (394)
T PRK03699 195 -----DKP---V---------------AKEKW-----GIGVLFLAIAALLYILAQLTFISWVPEYAQKKFGMSLEDAGNL 246 (394)
T ss_pred -----cCc---c---------------ccccC-----ChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCChHHhhHH
Confidence 000 0 01112 12233222233444322 3566778889975 79999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHhhhchhhhhHHHHHHHHHHHHHHHHHHhhcch-HHHHHHHHHHHHhhhchhhhhhhhhhhh
Q 011118 334 RGISATIGIAATILYPILQSRISTLRTGLWSIWSQWFCLLICVASIWIHNS-LVAAYMLMVGVATSRLGLWMFDLSVIQQ 412 (493)
Q Consensus 334 r~~~av~GllgT~~~~~l~~riGl~r~g~~~~~~q~~~L~~~v~~~~~~~~-~~s~~~l~~gi~~SR~GLw~fDl~~~~l 412 (493)
.+.-.+++.+|.++.+++.+|+|..|........ +..........+.. ......+..|.... +.+ .....+
T Consensus 247 ~~~~~~~~~ig~~~~g~l~dr~~~~~~l~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~G~~~~--~~~---~~~~~~ 318 (394)
T PRK03699 247 VSNFWMAYMVGMWIFSFIVRFFDLQRILTVLAGL---ALVLMYLFVNTDDPSHLLYAILGLGFFSS--AIY---TTIITL 318 (394)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhchhhHHHHHHHH---HHHHHHHHHHcCCchHHHHHHHHHHHHHH--HHH---HHHHHH
Confidence 9998889999999999999999987765543321 11111111122222 22223333333211 111 222334
Q ss_pred hhccCCCCcchhHHHHHHHHHHhh-HHHHHHHHHhccCCCCchHHHHHHHHHHHH
Q 011118 413 MQDLVPESDRCVVGGVQNSLQSTM-DLMAYTMGIIISNPQDFWKLILISVIVVTL 466 (493)
Q Consensus 413 ~Qe~vp~~~rG~v~gv~~sl~~~f-~l~~~~~~ii~~~p~~F~~l~~~S~~~V~~ 466 (493)
..+..|++ +++..|...+..++. -++..+.+.+....+............+.+
T Consensus 319 ~~~~~~~~-~~~~~g~~~~~~~~g~~i~p~~~G~l~~~~g~~~~~~~~~~~~~~~ 372 (394)
T PRK03699 319 GSQQTKVA-SPKLVNFILTCGTIGTMLTFVVTSPIVAHFGLQAALLTANGLYAVV 372 (394)
T ss_pred HHHHccCC-CHHHHHHHHHhhhHHHHHHHHHHHHHHHHhCchhhhhhhHHHHHHH
Confidence 44445544 556666666655555 567777787777666555555444444443
No 55
>TIGR00882 2A0105 oligosaccharide:H+ symporter.
Probab=99.33 E-value=2.6e-09 Score=111.49 Aligned_cols=363 Identities=11% Similarity=0.001 Sum_probs=193.6
Q ss_pred hhHHHHHHHHHHHHHhhHHHHHHHHHHHHHhCCCchHHHHHHHHHHHHHHHhhhccceeeecccchhHHHHHHHHHHHHH
Q 011118 17 FLTTYLYVAHFLARWGARMWEFSVGLYMISVWPDSLLFAAIYGAVESASIALFGPIVGHWVDKLTYVKVLQIWLVTQNLS 96 (493)
Q Consensus 17 ~~~~~L~~s~~lS~~Gdr~~~Fa~~L~lv~l~~~sll~~sv~gl~~~l~~llfg~~vG~~vDr~~R~~v~~~~~~~q~~~ 96 (493)
|+++++...+++=..+--++.=-.|.++.+.++-+...+++....-.+...+.+++.|.+.||.+|||.+..+.+.-.+.
T Consensus 2 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~g~~~~~~~l~~~i~~~~~G~l~Dr~grr~~~~~~~~~~~~~ 81 (396)
T TIGR00882 2 TNFWMFGLFFFLYFFIMSAYFPFFPIWLHDVNGLSKTDTGIVFSCISLFSILFQPLFGLISDKLGLKKHLLWIISGLLVL 81 (396)
T ss_pred hhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcHHHHHHHHHHHHHH
Confidence 57788878888888887777777788888878888899999999999999999999999999999999998775443221
Q ss_pred HHHHHHHHHHHHhhcccccchhHHHHHHHHHHHHHHHHHHhhhhhhhhhhccceEEEecCCCChhhhhhhhhHHHhHHHH
Q 011118 97 FIVAGVSVITLLFFSSLKSTNFIAFVLLVILTNISGAVGVISTLAGTILIEREWVVVISEGHPPEALTKMNSIIRRIDLT 176 (493)
Q Consensus 97 v~~s~~~~~~~l~~~~~~~~~~~~~~~l~~~~~~~g~~~~l~~~a~~iaieRDWvv~i~~~~~~~~L~~~Na~mrriDl~ 176 (493)
+..+...... .......+....+...+.+.......++. .+|++...+ ++ .+.....|.....
T Consensus 82 ----~~~~~~~~~~---~~~~~~~~~~~~~~~~~~g~~~~~~~~~~-----~~~~~~~~~----~~-~~~~g~~~~~~~~ 144 (396)
T TIGR00882 82 ----FAPFFIYVFG---PLLQSNILVGAIVGGLYLGFVFSAGAGAI-----EAYIEKVSR----NS-NFEYGKARMFGCV 144 (396)
T ss_pred ----HHHHHHHHhh---hHHHHHHHHHHHHHHHHHHHHhccchhhH-----HHHHHHhhh----hc-ccccchhhhhccc
Confidence 1110111110 00000011111111111222222222221 233322111 11 1233467777789
Q ss_pred HHhhhhHHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCcchhhhhhhhccCCCcccccccCCcccccccc
Q 011118 177 CKLLAPAITGFIISFVSLQASAMTLAIWTTVTVWVEYWLFMSVYKGIPALAESSQRRIRRSMPIDMEQSTSMPRERESLL 256 (493)
Q Consensus 177 ~~l~gP~~~G~l~~~~s~~~a~~~i~~~n~~S~~ve~~~l~~Vy~~~p~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 256 (493)
+..+||.++|.+.+ .+.+.......+.-.+..+. ... ..|+..++ ++.+ +..+.
T Consensus 145 g~~~g~~~~g~l~~-~~~~~~f~~~~~~~~~~~~~----~~~---~~~~~~~~--~~~~-----~~~~~----------- 198 (396)
T TIGR00882 145 GWALCASIAGILFS-IDPQIVFWLGSGFALILMLL----LMF---AKPKAPSS--ATVA-----NALGA----------- 198 (396)
T ss_pred HHHHHHHHHhhhhc-cCchHHHHHHHHHHHHHHHH----HHH---hCCCCchh--hhhh-----ccccc-----------
Confidence 99999999998876 46554433222322322211 111 12322111 0000 00000
Q ss_pred ccccchhHHHHHHHHHHHHhhhccccccccceeeecccchHHHHHHHHHH-HHhhhhhhHHHHHHHH----cCCCchHHH
Q 011118 257 SHDENNAELAEKRWRWKIIDWISNAPCVGAWQVYLKQEVVLPGVSLALLF-FTVLSFGTLMTATLEW----EGIPAYIIG 331 (493)
Q Consensus 257 ~~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~y~~q~v~la~~alalLy-~tVL~f~~l~~~yl~~----~gls~~~iG 331 (493)
+++... . +.++..+++|.++..+...+.. ...-.++..+..|+++ .|.+...+|
T Consensus 199 -~~~~~~---~-----------------~~~~~~l~~~~~~~~~l~~~~~~~~~~~~~~~~~~y~~~~~~~~~~~~~~~g 257 (396)
T TIGR00882 199 -NASAFS---L-----------------KLALELFRQRKFWMFVLYVVGVACVYDVFDQQFANFFTSFFATPQQGTRVFG 257 (396)
T ss_pred -ccCCCC---H-----------------HHHHHHHcCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccccchHHHH
Confidence 000000 0 0112233455443322222222 1222344456677664 366778899
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhhhchhhhhHHHHHHHHHHHHHHHHH-HhhcchHHHHHHHHHHHHhhhchhhhhhhhhh
Q 011118 332 IARGISATIGIAATILYPILQSRISTLRTGLWSIWSQWFCLLICVAS-IWIHNSLVAAYMLMVGVATSRLGLWMFDLSVI 410 (493)
Q Consensus 332 ~~r~~~av~GllgT~~~~~l~~riGl~r~g~~~~~~q~~~L~~~v~~-~~~~~~~~s~~~l~~gi~~SR~GLw~fDl~~~ 410 (493)
...+++++.+..+....+++.+|+|..|.-.++.. +....... .+.+.+.... ....+..++.-.......
T Consensus 258 ~~~~~~~i~~~~~~~~~g~l~~r~g~~~~l~~~~~----l~~l~~~~~~~~~~~~~~~----~~~~l~g~~~~~~~~~~~ 329 (396)
T TIGR00882 258 YVTTMGELLNALIMFCAPLIINRIGAKNALLIAGT----IMSVRIIGSSFATTALEVV----ILKMLHAFEVPFLLVGCF 329 (396)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhccchhHHHHHH----HHHHHHHHHHhcCChHHHH----HHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999998876655443 11212221 2222222111 112222222222233455
Q ss_pred hhhhccCCCCcchhHHHH-HHHHHHh-hHHHHHHHHHhccCCC
Q 011118 411 QQMQDLVPESDRCVVGGV-QNSLQST-MDLMAYTMGIIISNPQ 451 (493)
Q Consensus 411 ~l~Qe~vp~~~rG~v~gv-~~sl~~~-f~l~~~~~~ii~~~p~ 451 (493)
++.++..|++.+++..+. .++...+ .-++..+.|.+...-+
T Consensus 330 ~~~~~~~~~~~~at~~~~~~~~~~~lg~~~~~~l~G~l~~~~G 372 (396)
T TIGR00882 330 KYITSQFDVRLSATIYLIGFQFAKQLAMIFLSTLAGNMYDSIG 372 (396)
T ss_pred HHHHHhCCcceEEEeehHHHHHHHHHHHHHHHHhHHHHHHhcc
Confidence 677888888888886665 3333333 3777788888876543
No 56
>TIGR00886 2A0108 nitrite extrusion protein (nitrite facilitator).
Probab=99.32 E-value=9.6e-10 Score=112.35 Aligned_cols=346 Identities=13% Similarity=0.003 Sum_probs=187.8
Q ss_pred hhHHHHHHHHHHHHHhhHHHHHHHHHHHHHhCCCchHHHHHHHHHHHHHHHhhhccceeeecccchhHHHHHHHHHHHHH
Q 011118 17 FLTTYLYVAHFLARWGARMWEFSVGLYMISVWPDSLLFAAIYGAVESASIALFGPIVGHWVDKLTYVKVLQIWLVTQNLS 96 (493)
Q Consensus 17 ~~~~~L~~s~~lS~~Gdr~~~Fa~~L~lv~l~~~sll~~sv~gl~~~l~~llfg~~vG~~vDr~~R~~v~~~~~~~q~~~ 96 (493)
|.++..+...+++-.+.-++....|.++.+-++-|....+.......+..++.+++.|.+.||++||+++..+.+.-.+.
T Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~i~ 80 (366)
T TIGR00886 1 RNLFFSWFGFFLSFSVWFAFSPLAVQMIKDDLGLSTAQLGNLVAVPVLAGAVLRIILGFLVDKFGPRYTTTLSLLLLAIP 80 (366)
T ss_pred CchHHHHHHHHHHHHHHHHhHHhhhHHHHHHhCCCHHHhhHhhHHHHHHHHHHHHHHHHHHHHhCchHHHHHHHHHHHHH
Confidence 35667888888888888888888886677777888889999999999999999999999999999999988776433332
Q ss_pred HHHHHHHHHHHHhhcccccchhHHHHHHHHHHHHHHHHHHhhhhhhhhhhccceEEEecCCCChhhhhhhhhHHHhHHHH
Q 011118 97 FIVAGVSVITLLFFSSLKSTNFIAFVLLVILTNISGAVGVISTLAGTILIEREWVVVISEGHPPEALTKMNSIIRRIDLT 176 (493)
Q Consensus 97 v~~s~~~~~~~l~~~~~~~~~~~~~~~l~~~~~~~g~~~~l~~~a~~iaieRDWvv~i~~~~~~~~L~~~Na~mrriDl~ 176 (493)
+.+ .... .. ++..+.... .+.|..+....++ . ..-.||. ++ ++..+.++.....-..
T Consensus 81 ----~~~--~~~~----~~-~~~~~~~~~---~~~g~~~~~~~~~-~-~~~~~~~----~~---~~r~~~~~~~~~~~~~ 137 (366)
T TIGR00886 81 ----CLW--AGLA----VQ-SYSVLLLLR---LFIGIAGGSFASC-M-PWISFFF----PK---KIQGTALGLAAGWGNM 137 (366)
T ss_pred ----HHH--HHHH----hh-hHHHHHHHH---HHHHHhchhhHhH-H-HHHHHhc----CH---hhhhHHHHHHHHHhHH
Confidence 111 1111 10 222221111 1223333333322 2 2234554 22 4567788887777778
Q ss_pred HHhhhhHHHHHHHHhh----------hhHHHH-HHHHHHHHHHHHHHHHHHHHHHhhcCcchhhhhhhhccCCCcccccc
Q 011118 177 CKLLAPAITGFIISFV----------SLQASA-MTLAIWTTVTVWVEYWLFMSVYKGIPALAESSQRRIRRSMPIDMEQS 245 (493)
Q Consensus 177 ~~l~gP~~~G~l~~~~----------s~~~a~-~~i~~~n~~S~~ve~~~l~~Vy~~~p~L~~~~~~~~~~~~~~~~~~~ 245 (493)
+..++|.+++.+.... +.+... ....+...+..+ ++.....+.|+-. +++++. +.+ ++
T Consensus 138 g~~~~~~i~~~l~~~~~~~~~~~~~~~w~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~--~~~~~~--~~~--~~- 206 (366)
T TIGR00886 138 GGGVAQFVMPPIIGSLIFGAGLPAHLAWGWAFVIVPAGILLLPAL----LIFFVGADTPPGK--PATGKL--SFK--GA- 206 (366)
T ss_pred HHHHHHHHHHHHHHHHHhcccccccccccchhHHHHHHHHHHHHH----HHHHhcccCCccc--ccchhc--ccc--cc-
Confidence 8888888888776532 233222 111122221111 1111111222100 000000 000 00
Q ss_pred cCCccccccccccccchhHHHHHHHHHHHHhhhccccccccceeeecccchHHHHHHHHHH-HHhhhhhhHHHHHHHH-c
Q 011118 246 TSMPRERESLLSHDENNAELAEKRWRWKIIDWISNAPCVGAWQVYLKQEVVLPGVSLALLF-FTVLSFGTLMTATLEW-E 323 (493)
Q Consensus 246 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~y~~q~v~la~~alalLy-~tVL~f~~l~~~yl~~-~ 323 (493)
. .. ... + . .+.++..+++|.++.......++ ....++.+.+..|+++ .
T Consensus 207 ----~------~~-~~~-~--~----------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 256 (366)
T TIGR00886 207 ----R------WS-VGT-G--A----------------LGDQLKVFRDRHTWILALLYSVTFGSFLGVSSIFAMFFKDQF 256 (366)
T ss_pred ----c------cc-ccc-h--h----------------HHHHHHHHhccchhhHHHHHHHHHHHHHHHHHHHHHHHHHHc
Confidence 0 00 000 0 0 00111123445444333333333 3334566777788885 7
Q ss_pred CCCchHHHHHHHHHHHHHHHHHHHHHHHHhhhchhhhhHHHHHHHHHHHHHHHHHHh--hcc--hH-HHHHHHHHHHHhh
Q 011118 324 GIPAYIIGIARGISATIGIAATILYPILQSRISTLRTGLWSIWSQWFCLLICVASIW--IHN--SL-VAAYMLMVGVATS 398 (493)
Q Consensus 324 gls~~~iG~~r~~~av~GllgT~~~~~l~~riGl~r~g~~~~~~q~~~L~~~v~~~~--~~~--~~-~s~~~l~~gi~~S 398 (493)
|+++...|.+.....+.++.|+.+.+++.+|+|..|....+... ...+..... ..+ +. .....+....+..
T Consensus 257 g~~~~~~~~~~~~~~~~~~~~~~~~g~l~~r~g~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 332 (366)
T TIGR00886 257 GLSKVTAGAYASLGGLLGSLARPLGGAISDRLGGARKLLMSFLG----VAMGAFLVVLGLVSPLSLAVFIVLFVALFFFS 332 (366)
T ss_pred CCcHHHHHHHHHHHHHHHHHHhhccchHHHhhccchhHHHHHHH----HHHHHHHHHhcCCCcchHHHHHHHHHHHHHHh
Confidence 99999999999999999999999999999999977665544431 111111111 111 11 1112222222222
Q ss_pred hchhhhhhhhhhhhhhccCCCCcchhHHHHHHHHHHh
Q 011118 399 RLGLWMFDLSVIQQMQDLVPESDRCVVGGVQNSLQST 435 (493)
Q Consensus 399 R~GLw~fDl~~~~l~Qe~vp~~~rG~v~gv~~sl~~~ 435 (493)
..+.. ....+..+..| +++|+++|+.+++.++
T Consensus 333 g~~~~----~~~~~~~~~~~-~~~g~~~g~~~~~~~~ 364 (366)
T TIGR00886 333 GAGNG----STFALVPHIFR-RATGAVSGLVGAIGNL 364 (366)
T ss_pred ccccc----hhhhcchhhch-hhcccHHHHHHHhccC
Confidence 22222 23334445455 6999999998887653
No 57
>PRK09556 uhpT sugar phosphate antiporter; Reviewed
Probab=99.32 E-value=3.5e-09 Score=113.36 Aligned_cols=369 Identities=11% Similarity=0.064 Sum_probs=192.5
Q ss_pred HHHHHHHHHHHhhHHHHHHHHHHHHHhCCCchHHHHHHHHHHHHHHHhhhccceeeecccchhHHHHHHHHHHHHHHHHH
Q 011118 21 YLYVAHFLARWGARMWEFSVGLYMISVWPDSLLFAAIYGAVESASIALFGPIVGHWVDKLTYVKVLQIWLVTQNLSFIVA 100 (493)
Q Consensus 21 ~L~~s~~lS~~Gdr~~~Fa~~L~lv~l~~~sll~~sv~gl~~~l~~llfg~~vG~~vDr~~R~~v~~~~~~~q~~~v~~s 100 (493)
.+..+.++..........+.|.+.. -++-|....+.....-.+...+..++.|.+.||++||+++..+.+.-.+...+
T Consensus 33 ~~~~~~~~~y~~r~~~~~~~~~i~~-~~~~s~~~~g~~~s~~~~~~~~~~~~~G~l~Dr~g~r~~l~~~~~~~~~~~~~- 110 (467)
T PRK09556 33 VVFIGYLTMYLIRKNFKAAQNDMIS-TYGLSTTELGMIGLGFSITYGVGKTLVGYYADGKNTKQFLPFLLILSAICMLG- 110 (467)
T ss_pred HHHHHHHHHHHHhcChhhhhHHHHH-hcCCCHHHHHHHHHHHHHHHHHHHhhhhhHhhccCccchHHHHHHHHHHHHHH-
Confidence 3445555555566667788887554 45567788888888889999999999999999999999987765333222111
Q ss_pred HHHHHHHHhhcccccchhHHHHHHHHHHHHHHHHHHhhhhhhhhhhccceEEEecCCCChhhhhhhhhHHHhHHHHHHhh
Q 011118 101 GVSVITLLFFSSLKSTNFIAFVLLVILTNISGAVGVISTLAGTILIEREWVVVISEGHPPEALTKMNSIIRRIDLTCKLL 180 (493)
Q Consensus 101 ~~~~~~~l~~~~~~~~~~~~~~~l~~~~~~~g~~~~l~~~a~~iaieRDWvv~i~~~~~~~~L~~~Na~mrriDl~~~l~ 180 (493)
..++.. . ...+... +++.-.+.|..+....++ ...+-.||.+ + ++..++++.....-.+..++
T Consensus 111 ----~~~~~~-~-~~~~~~~---l~~~r~l~G~~~~~~~~~-~~~~i~~~~~----~---~~rg~a~gi~~~~~~lG~~l 173 (467)
T PRK09556 111 ----FGASLG-S-GSVSLGL---MIALWALSGFFQSTGGPC-SYSTITRWTP----R---RKRGRFLGFWNISHNLGGAG 173 (467)
T ss_pred ----HHHHHh-c-ccchHHH---HHHHHHHHHHHHhccchH-HHHHHHHHcC----c---cceeeeEEeeecccchhhhH
Confidence 111100 0 1112222 222222345555555555 3345678873 3 34566677665555566666
Q ss_pred hhHHHHHHHHhh---hhHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCcchhhhhhhhccCCCcccccccCCccccccccc
Q 011118 181 APAITGFIISFV---SLQASAMTLAIWTTVTVWVEYWLFMSVYKGIPALAESSQRRIRRSMPIDMEQSTSMPRERESLLS 257 (493)
Q Consensus 181 gP~~~G~l~~~~---s~~~a~~~i~~~n~~S~~ve~~~l~~Vy~~~p~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 257 (493)
||.+...+.... +.+....+.++ ++.++-..+ ..+.+..|+-. +..+ ++ +..++ .. .
T Consensus 174 ~~~i~~~~~~~~~~~~~~~~f~~~g~---~~~~~~i~~-~~~~~~~p~~~---~~~~----~~--~~~~~-~~------~ 233 (467)
T PRK09556 174 AGGVALWGANYFFDGHVIGMFIFPSI---IALIIGFIG-LRYGSDSPEEL---GWGK----AE--EIFGE-PI------S 233 (467)
T ss_pred HHHHHHHHHHhhccCcchhHHHHHHH---HHHHHHHHH-HHhCCCChhhc---CCCC----hh--hcccC-cc------c
Confidence 666665554432 11111111111 122221111 11112223211 0000 00 00000 00 0
Q ss_pred cccchhHHHHHHHHHHHHhhhccccccccc-eeeecccchHHHHHHH-HHHHHhhhhhhHHHHHHHH-cCCCchHHHHHH
Q 011118 258 HDENNAELAEKRWRWKIIDWISNAPCVGAW-QVYLKQEVVLPGVSLA-LLFFTVLSFGTLMTATLEW-EGIPAYIIGIAR 334 (493)
Q Consensus 258 ~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~-~~y~~q~v~la~~ala-lLy~tVL~f~~l~~~yl~~-~gls~~~iG~~r 334 (493)
+++...+..+.+ ..+.+ +..+++|.+....... +.|....++...++.|+++ .|+++.+.+...
T Consensus 234 ~~~~~~~~~~~~-------------~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~p~yl~~~~g~s~~~a~~~~ 300 (467)
T PRK09556 234 EEDKETESTDMT-------------KWQIFVEYVLKNPVIWLLCFANIFLYIVRIGIDNWSPVYAFQELGFSKEDAINTF 300 (467)
T ss_pred hhhhccccccCc-------------HHHHHHHHHHcChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccCCCHHHHHHHH
Confidence 000000000000 00111 1135666555444333 3333334566778889985 899999999998
Q ss_pred HHHHHHHHHHHHHHHHHHhhhchhhhhHHHHHHHHHHHHHHHHHHhhcchHH--HHHHHHHHHHhhhchhhhhhhhhhhh
Q 011118 335 GISATIGIAATILYPILQSRISTLRTGLWSIWSQWFCLLICVASIWIHNSLV--AAYMLMVGVATSRLGLWMFDLSVIQQ 412 (493)
Q Consensus 335 ~~~av~GllgT~~~~~l~~riGl~r~g~~~~~~q~~~L~~~v~~~~~~~~~~--s~~~l~~gi~~SR~GLw~fDl~~~~l 412 (493)
....+++++|..+.+++..|+|..|...........++ .........+.. .+..+..|... .|.. ......
T Consensus 301 ~~~~~~~~ig~~~~G~lsDr~g~r~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~G~~~--~~~~---~~~~~~ 373 (467)
T PRK09556 301 TLFEIGALVGSLLWGWLSDLANGRRALVACIALALIIF--TLGVYQHATSEYMYLASLFALGFLV--FGPQ---LLIGVA 373 (467)
T ss_pred HHHHHHHHHHHHHHHHHHHHHCCCchHHHHHHHHHHHH--HHHHHHhcCcHHHHHHHHHHHHHHH--hhHH---HHHHHH
Confidence 88889999999999999999997665443332111111 111111111221 12333333221 1111 112235
Q ss_pred hhccCCCCcchhHHHHHHHHHHhh--HHHHHHHHHhcc
Q 011118 413 MQDLVPESDRCVVGGVQNSLQSTM--DLMAYTMGIIIS 448 (493)
Q Consensus 413 ~Qe~vp~~~rG~v~gv~~sl~~~f--~l~~~~~~ii~~ 448 (493)
..|..|+++||+++|+.+...++. -+...+.|.+..
T Consensus 374 ~~~~~p~~~~g~a~gi~~~~g~l~g~~~~~~~~G~i~~ 411 (467)
T PRK09556 374 AVGFVPKKAIGVANGIKGTFAYLFGDSFAKVGLGMIAD 411 (467)
T ss_pred HHhhcchhhHHHHHHHHHHHHHHHhHHHHhhhHHHHhc
Confidence 568999999999999999998863 577788888876
No 58
>PRK03633 putative MFS family transporter protein; Provisional
Probab=99.29 E-value=1.1e-08 Score=106.32 Aligned_cols=341 Identities=10% Similarity=0.040 Sum_probs=188.9
Q ss_pred hhhHHHHHHHHHHHHHhhHHHHHHHHHHHHHhCCCchHHHHHHHHHHHHHHHhhhccceeeecccchhHHHHHHHHHHHH
Q 011118 16 SFLTTYLYVAHFLARWGARMWEFSVGLYMISVWPDSLLFAAIYGAVESASIALFGPIVGHWVDKLTYVKVLQIWLVTQNL 95 (493)
Q Consensus 16 ~~~~~~L~~s~~lS~~Gdr~~~Fa~~L~lv~l~~~sll~~sv~gl~~~l~~llfg~~vG~~vDr~~R~~v~~~~~~~q~~ 95 (493)
+++...+..++++...+..+..-..|.++.+. +-|...++.......+...+..+..|.+.||.+|||++..+.+.-.+
T Consensus 5 ~~~~~~~~~~~~~~~~~~~~~~~~lp~~~~~~-~~s~~~~G~~~s~~~l~~~~~~~~~g~l~dr~g~k~~~~~~~~~~~~ 83 (381)
T PRK03633 5 TRPVLLLLCGLLLLTLAIAVLNTLVPLWLAQE-HLPTWQVGVVSSSYFTGNLVGTLLAGYVIKRIGFNRSYYLASLIFAA 83 (381)
T ss_pred HHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHc-CCCHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHH
Confidence 45789999999999999999999999988865 56888889999989999999999999999999999998776533222
Q ss_pred HHHHHHHHHHHHHhhcccccchhHHHHHHHHHHHHHHHHHHhhhhhhhhhhccceEEEecCCCChhhhhhhhhHHHhHHH
Q 011118 96 SFIVAGVSVITLLFFSSLKSTNFIAFVLLVILTNISGAVGVISTLAGTILIEREWVVVISEGHPPEALTKMNSIIRRIDL 175 (493)
Q Consensus 96 ~v~~s~~~~~~~l~~~~~~~~~~~~~~~l~~~~~~~g~~~~l~~~a~~iaieRDWvv~i~~~~~~~~L~~~Na~mrriDl 175 (493)
. +.. . .. . .++..+... -.+.|.......+.....+-+++ .+ ++..+..+.....-.
T Consensus 84 ~----~~~--~-~~----~-~~~~~l~~~---~~l~G~~~~~~~~~~~~~~~~~~-----~~---~~~~~~~~~~~~~~~ 140 (381)
T PRK03633 84 G----CAG--L-GL----M-VGFWSWLAW---RFVAGIGCAMIWVVVESALMCSG-----TS---RNRGRLLAAYMMVYY 140 (381)
T ss_pred H----HHH--H-HH----h-ccHHHHHHH---HHHHHHHHHHHHHHHHHHHHHhC-----CH---HHHHHHHHHHHHHHH
Confidence 2 111 1 11 1 122222111 12334333333333333322222 12 344555565555566
Q ss_pred HHHhhhhHHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCcchhhhhhhhccCCCcccccccCCccccccc
Q 011118 176 TCKLLAPAITGFIISFVSLQASAMTLAIWTTVTVWVEYWLFMSVYKGIPALAESSQRRIRRSMPIDMEQSTSMPRERESL 255 (493)
Q Consensus 176 ~~~l~gP~~~G~l~~~~s~~~a~~~i~~~n~~S~~ve~~~l~~Vy~~~p~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 255 (493)
....+||.+.+.+.+......... . .. +... .+.-++.+.|+.. +++ ++
T Consensus 141 ~g~~~g~~~~~~l~~~~~~~~~~~-~-~~--~~~~----~~~~~~~~~~~~~-----------~~~-~~----------- 189 (381)
T PRK03633 141 LGTVLGQLLVSKVSTELMSVLPWV-T-GL--VLAA----ILPLLFTRILNQQ-----------AEN-HD----------- 189 (381)
T ss_pred HHHHHHHHHHhcccccccchHHHH-H-HH--HHHH----HHHHHHhcccCCC-----------CCC-CC-----------
Confidence 677777777777655321111100 0 00 0000 0001111222100 000 00
Q ss_pred cccccchhHHHHHHHHHHHHhhhccccccccceeeecccchHHHHHHHHHHH-HhhhhhhHHHHHHHHcCCCchHHHHHH
Q 011118 256 LSHDENNAELAEKRWRWKIIDWISNAPCVGAWQVYLKQEVVLPGVSLALLFF-TVLSFGTLMTATLEWEGIPAYIIGIAR 334 (493)
Q Consensus 256 ~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~y~~q~v~la~~alalLy~-tVL~f~~l~~~yl~~~gls~~~iG~~r 334 (493)
... . ++ .+++|.++..+...+.+. ....+.+.+..|++++|+++...|.+.
T Consensus 190 -----~~~---~----~~----------------~~~~~~~~~~~~~~~~~~~~~~~~~~~lp~~~~~~g~s~~~~g~~~ 241 (381)
T PRK03633 190 -----STS---I----WP----------------MLKLRQARLGVNGCIISGIVLGSLYGLMPLYLNHQGMSDASIGFWM 241 (381)
T ss_pred -----CCC---H----HH----------------HHHhcchHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHH
Confidence 000 0 00 123333333222222221 112233456778888999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHhhhchhhhhHHHHHHHHHHHHHHHHHHhhcchHHHHHHHHHHHHhhhchhhhhhhhhhhhhh
Q 011118 335 GISATIGIAATILYPILQSRISTLRTGLWSIWSQWFCLLICVASIWIHNSLVAAYMLMVGVATSRLGLWMFDLSVIQQMQ 414 (493)
Q Consensus 335 ~~~av~GllgT~~~~~l~~riGl~r~g~~~~~~q~~~L~~~v~~~~~~~~~~s~~~l~~gi~~SR~GLw~fDl~~~~l~Q 414 (493)
+...++++.+.+..+++.+|+|..+....+.....++. .. .. +........++.|.. -...-.+.+....
T Consensus 242 ~~~~~~~~~~~~~~g~l~dr~~~~~~l~~~~~~~~~~~---~~-~~-~~~~~~~~~~l~g~~-----~~~~~p~~~~~~~ 311 (381)
T PRK03633 242 ALLVSAGILGQWPIGRLADRFGRLLVLRVQVFVVILGS---IA-ML-SQAAMAPALFILGAA-----GFTLYPVAMAWAC 311 (381)
T ss_pred HHHHHHHHHHHhhhHHHHHHcCcHHHHHHHHHHHHHHH---HH-Hh-hhHHHHHHHHHHHHH-----HHhHHHHHHHHHH
Confidence 99999999999999999999998766554443222111 11 11 111111111222221 1122355666677
Q ss_pred ccCCCCcchhHHHHHHHHHHhh-HHHHHHHHHhccC
Q 011118 415 DLVPESDRCVVGGVQNSLQSTM-DLMAYTMGIIISN 449 (493)
Q Consensus 415 e~vp~~~rG~v~gv~~sl~~~f-~l~~~~~~ii~~~ 449 (493)
|.+|+++++..++......++- -++..+.|.+...
T Consensus 312 ~~~~~~~~~~~~~~~~~~~~lG~~igp~~~G~l~~~ 347 (381)
T PRK03633 312 EKVEHHELVAMNQALLLSYTVGSLLGPSFTAMLMQN 347 (381)
T ss_pred ccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 8889988888777776554443 5666677766554
No 59
>PRK10406 alpha-ketoglutarate transporter; Provisional
Probab=99.28 E-value=3.1e-08 Score=104.94 Aligned_cols=346 Identities=12% Similarity=0.070 Sum_probs=169.5
Q ss_pred HHHHHHHHHhhHHHHHHHHHHHHHhCCCc--hHH----HHHHHHHHHHHHHhhhccceeeecccchhHHHHHHHHHHHHH
Q 011118 23 YVAHFLARWGARMWEFSVGLYMISVWPDS--LLF----AAIYGAVESASIALFGPIVGHWVDKLTYVKVLQIWLVTQNLS 96 (493)
Q Consensus 23 ~~s~~lS~~Gdr~~~Fa~~L~lv~l~~~s--ll~----~sv~gl~~~l~~llfg~~vG~~vDr~~R~~v~~~~~~~q~~~ 96 (493)
+.+.++.-..-.++.++.|.+..+.+|.+ ... .+++ ....+...+.+...|.+.||++|||++..+.+.-.+.
T Consensus 28 ~~~~~~~~~d~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~ig~~~~G~l~Dr~Grr~~l~~~~~~~~~~ 106 (432)
T PRK10406 28 SSGNLVEWFDFYVYSFCSLYFAHIFFPSGNTTTQLLQTAGVF-AAGFLMRPIGGWLFGRIADKHGRKKSMLISVCMMCFG 106 (432)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhCCCCCchHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHhcCcHHHHHHHHHHHHHH
Confidence 34577777777788888888777776532 221 1233 2344555588889999999999999998887544333
Q ss_pred HHHHHHHHHHHHhhcccccchhHHHHHHHHHHHHHHHHHHhhhhhhhhhhccceEEEecCCCChhhhhhhhhHHHhHHHH
Q 011118 97 FIVAGVSVITLLFFSSLKSTNFIAFVLLVILTNISGAVGVISTLAGTILIEREWVVVISEGHPPEALTKMNSIIRRIDLT 176 (493)
Q Consensus 97 v~~s~~~~~~~l~~~~~~~~~~~~~~~l~~~~~~~g~~~~l~~~a~~iaieRDWvv~i~~~~~~~~L~~~Na~mrriDl~ 176 (493)
+.+ ..+.++. ...+......+++.=.+.|.......+... ..-.||.| + ++..+.++....--..
T Consensus 107 ----~~~--~~~~~~~-~~~~~~~~~~l~~~R~l~G~g~g~~~~~~~-~~i~e~~p----~---~~rg~~~~~~~~~~~~ 171 (432)
T PRK10406 107 ----SLV--IACLPGY-ETIGTWAPALLLLARLFQGLSVGGEYGTSA-TYMSEVAV----E---GRKGFYASFQYVTLIG 171 (432)
T ss_pred ----HHH--HhhcCCc-hhHHHHHHHHHHHHHHHHHhhhhhhHhhHH-HHHHHhCC----C---CcccHHHHHHHHHHHH
Confidence 111 1111111 000011111122122233433332222322 22345653 2 2223344444433445
Q ss_pred HHhhhhHHHHHHHH--------hhhhHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCcchhhhhhhhccCCCcccccccCC
Q 011118 177 CKLLAPAITGFIIS--------FVSLQASAMTLAIWTTVTVWVEYWLFMSVYKGIPALAESSQRRIRRSMPIDMEQSTSM 248 (493)
Q Consensus 177 ~~l~gP~~~G~l~~--------~~s~~~a~~~i~~~n~~S~~ve~~~l~~Vy~~~p~L~~~~~~~~~~~~~~~~~~~~~~ 248 (493)
..+++|.+.+.+.. ..|.+....+.++...+. +++ +...||..+.++++ .
T Consensus 172 G~~~~~~~~~~~~~~~~~~~~~~~gWr~~F~i~~~~~ll~-----~~~---~~~~~e~~~~~~~~----------~---- 229 (432)
T PRK10406 172 GQLLALLVVVVLQQTLEDAELREWGWRIPFALGAVLAVVA-----LWL---RRQLDETSQQETRA----------L---- 229 (432)
T ss_pred HHHHHHHHHHHHHHhCCHHHHhccchHHHHHHHHHHHHHH-----HHH---HhcCCCCchHHHhh----------h----
Confidence 55566655444432 345555543222222221 111 22344422100000 0
Q ss_pred ccccccccccccchhHHHHHHHHHHHHhhhccccccccceeeecccchH-HHHHHHHH-HHHhhhhhhHHHHHHHH-cCC
Q 011118 249 PRERESLLSHDENNAELAEKRWRWKIIDWISNAPCVGAWQVYLKQEVVL-PGVSLALL-FFTVLSFGTLMTATLEW-EGI 325 (493)
Q Consensus 249 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~y~~q~v~l-a~~alalL-y~tVL~f~~l~~~yl~~-~gl 325 (493)
+ + ...++..++++.+. ..+...+. ++...++..-+..|+.+ .|+
T Consensus 230 ----------------~-~----------------~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~lp~~l~~~~g~ 276 (432)
T PRK10406 230 ----------------K-E----------------AGSLKGLWRNRRAFIMVLGFTAAGSLCFYTFTTYMQKYLVNTAGM 276 (432)
T ss_pred ----------------c-c----------------cccHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCC
Confidence 0 0 00112222333222 22222222 22222345567778874 799
Q ss_pred CchHHHHHHHHHHHHHHHHHHHHHHHHhhhchhhhhHHHHHHHHHHHHHHHHHH-hh---cchHHHHHHHHHHHHhhhch
Q 011118 326 PAYIIGIARGISATIGIAATILYPILQSRISTLRTGLWSIWSQWFCLLICVASI-WI---HNSLVAAYMLMVGVATSRLG 401 (493)
Q Consensus 326 s~~~iG~~r~~~av~GllgT~~~~~l~~riGl~r~g~~~~~~q~~~L~~~v~~~-~~---~~~~~s~~~l~~gi~~SR~G 401 (493)
+....+...++..+.+.++..+.+++.+|+|..|...+... .+...+.... .. ..+.....++..+... .|
T Consensus 277 s~~~~~~~~~i~~~~~~i~~~~~G~l~Dr~grr~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~ 351 (432)
T PRK10406 277 HANVASGIMTAALFVFMLIQPLIGALSDKIGRRTSMLCFGS---LAALFTVPILSALQNVSSPYAAFGLVMCALLI--VS 351 (432)
T ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCchHHHHHHHH---HHHHHHHHHHHHHHcCCcHHHHHHHHHHHHHH--HH
Confidence 99999999998888888888899999999997665543332 1111111111 11 1111111111111111 11
Q ss_pred hhhhhhhhhhhhhccCCCCcchhHHHHHHHHHHhh--HHHHHHHHHh
Q 011118 402 LWMFDLSVIQQMQDLVPESDRCVVGGVQNSLQSTM--DLMAYTMGII 446 (493)
Q Consensus 402 Lw~fDl~~~~l~Qe~vp~~~rG~v~gv~~sl~~~f--~l~~~~~~ii 446 (493)
. +......+.+|..|++.||+..|+.+++.+.. ....++.+++
T Consensus 352 ~--~~~~~~~~~~e~fp~~~r~t~~g~~~~~g~~~~g~~~p~~~~~l 396 (432)
T PRK10406 352 F--YTSISGILKAEMFPAQVRALGVGLSYAVANALFGGSAEYVALSL 396 (432)
T ss_pred H--HHHHHHHHHHHHCCCCccchhhhHHHHHHHHHHHhHHHHHHHHH
Confidence 1 12234567899999999999999999886652 3333444443
No 60
>TIGR00712 glpT glycerol-3-phosphate transporter. This model describes a very hydrophobic protein, predicted to span the membrane at least 8 times. The two members confirmed experimentally as glycerol-3-phosphate transporters, from E. coli and B. subtilis, share more than 50 % amino acid identity. Proteins of the hexose phosphate and phosphoglycerate transport systems are also quite similar.
Probab=99.27 E-value=8.9e-09 Score=109.27 Aligned_cols=372 Identities=11% Similarity=0.059 Sum_probs=194.2
Q ss_pred HHHHHHHHHHHHhhHH----HHHHHHHHHHHhCCCchHHHHHHHHHHHHHHHhhhccceeeecccchhHHHHHHHHHHHH
Q 011118 20 TYLYVAHFLARWGARM----WEFSVGLYMISVWPDSLLFAAIYGAVESASIALFGPIVGHWVDKLTYVKVLQIWLVTQNL 95 (493)
Q Consensus 20 ~~L~~s~~lS~~Gdr~----~~Fa~~L~lv~l~~~sll~~sv~gl~~~l~~llfg~~vG~~vDr~~R~~v~~~~~~~q~~ 95 (493)
+..+.+.++......+ +-+..|.+. + .+-|....+.......+...+..+..|.+.||.+||+.+..+.+...+
T Consensus 26 ~~~~~~~~~~~~~~~~~~~~~~~~~p~~~-~-~g~s~~~~g~~~~~~~~~~~~~~~~~G~l~dr~g~~~~~~~~~~~~~~ 103 (438)
T TIGR00712 26 WQVFLGIFFGYAAYYLVRKNFALAMPYLV-E-QGFSKGELGFALSAISIAYGFSKFIMGSVSDRSNPRVFLPAGLILSAA 103 (438)
T ss_pred HHHHHHHHHHHHHHHHHhccHHhhhHHHH-H-cCCCHhHhHHHHHHHHHHHHHhhhccchhhhccCCceehHHHHHHHHH
Confidence 3344444444444333 455667543 4 366777888888888899999999999999999999988776543333
Q ss_pred HHHHHHHHHHHHHhhcccccchhHHHHHHHHHHHHHHHHHHhhhhhhhhhhccceEEEecCCCChhhhhhhhhHHHhHHH
Q 011118 96 SFIVAGVSVITLLFFSSLKSTNFIAFVLLVILTNISGAVGVISTLAGTILIEREWVVVISEGHPPEALTKMNSIIRRIDL 175 (493)
Q Consensus 96 ~v~~s~~~~~~~l~~~~~~~~~~~~~~~l~~~~~~~g~~~~l~~~a~~iaieRDWvv~i~~~~~~~~L~~~Na~mrriDl 175 (493)
. +.+ ....+ . ...++..+ ++.-.+.|.......+.....+. ||. ++ ++..+.++.....-.
T Consensus 104 ~----~~~--~~~~~-~-~~~~~~~l---~~~~~l~g~~~g~~~~~~~~~i~-~~~----~~---~~rg~~~~~~~~~~~ 164 (438)
T TIGR00712 104 V----MLL--MGFVP-W-ATSSIAIM---FVLLFLNGWFQGMGWPPCGRTMV-HWW----SQ---SERGTIVSIWNCAHN 164 (438)
T ss_pred H----HHH--Hhccc-c-ccchHHHH---HHHHHHHHHHhhcchHHHHHHHH-Hhc----Cc---ccchhHHHHHHHHHH
Confidence 2 111 11111 0 01111111 11111223333333222222222 454 22 356778888777778
Q ss_pred HHHhhhhHHHHHHHH-hhhhHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCcchhhhhhhhccCCCcccccccCCcccccc
Q 011118 176 TCKLLAPAITGFIIS-FVSLQASAMTLAIWTTVTVWVEYWLFMSVYKGIPALAESSQRRIRRSMPIDMEQSTSMPRERES 254 (493)
Q Consensus 176 ~~~l~gP~~~G~l~~-~~s~~~a~~~i~~~n~~S~~ve~~~l~~Vy~~~p~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 254 (493)
....++|.+.+.++. ..+.+.+.....+..++..++-++++ ++.|+-.+.++.++.+ .+.++ .
T Consensus 165 ~g~~~~~~l~~~~~~~~~~w~~~f~~~~~~~~i~~~~~~~~~----~~~~~~~~~~~~~~~~---~~~~~------~--- 228 (438)
T TIGR00712 165 IGGGIPPLLVLLGMAWFNDWHAALYFPAICAIIVALFAFAMM----RDTPQSCGLPPIEEYR---NDYPD------D--- 228 (438)
T ss_pred hHhHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHHhc----cCCHHhcCCCCchhcc---ccccc------c---
Confidence 888888887776554 34666665544455554443322221 1222110000000000 00000 0
Q ss_pred ccccccchhHHHHHHHHHHHHhhhccccccccceeeecccchHHHHHHHHHH-HHhhhhhhHHHHHHHH-cCCCchHHHH
Q 011118 255 LLSHDENNAELAEKRWRWKIIDWISNAPCVGAWQVYLKQEVVLPGVSLALLF-FTVLSFGTLMTATLEW-EGIPAYIIGI 332 (493)
Q Consensus 255 ~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~y~~q~v~la~~alalLy-~tVL~f~~l~~~yl~~-~gls~~~iG~ 332 (493)
....++.+.+ .++.. ++..+++|.++........+ ....++....+.|+++ .|+++...|.
T Consensus 229 -----~~~~~~~~~~-~~~~~-----------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~l~~~~g~s~~~~~~ 291 (438)
T TIGR00712 229 -----YNEKAEQELT-AKEIF-----------MQYVLPNKLLWYIAIANVFVYLLRYGVLDWSPTYLKEVKHFALDKSSW 291 (438)
T ss_pred -----cccccccccc-hHHHH-----------HHHHccCchHHHHHHHHHHHHHHHHHHHHhHHHHHHHccCCChhhHHH
Confidence 0000000000 00000 11235677666665554443 3334566678889986 7999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHhhhchhhhhHHHHHHHHHHHHHHHHHHhhc--chHHH--HHHHHHHHHhhhchhhhhhhh
Q 011118 333 ARGISATIGIAATILYPILQSRISTLRTGLWSIWSQWFCLLICVASIWIH--NSLVA--AYMLMVGVATSRLGLWMFDLS 408 (493)
Q Consensus 333 ~r~~~av~GllgT~~~~~l~~riGl~r~g~~~~~~q~~~L~~~v~~~~~~--~~~~s--~~~l~~gi~~SR~GLw~fDl~ 408 (493)
...+-.+.+++|+++.+++.+|++..|....+...-.. ...++...+.. ...+. ..++..|. +.++--..
T Consensus 292 ~~~~~~~~~~ig~~~~g~l~dr~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~g~-----~~~~~~~~ 365 (438)
T TIGR00712 292 AYFLYEYAGIPGTLLCGWMSDKVFKGNRGATGVFFMTL-VTIAVIVYWMNPAGNPLVDMICMIVIGF-----LIYGPVML 365 (438)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhccCcccHHHHHHHHH-HHHHHHHHHhcCCCchHHHHHHHHHHHH-----HHccHHHH
Confidence 99998999999999999999999754433322211001 11112222221 11121 11222222 22222222
Q ss_pred hhhhhhccCCCCcchhHHHHHHHHHHhh-H-HHHHHHHHhccCCC
Q 011118 409 VIQQMQDLVPESDRCVVGGVQNSLQSTM-D-LMAYTMGIIISNPQ 451 (493)
Q Consensus 409 ~~~l~Qe~vp~~~rG~v~gv~~sl~~~f-~-l~~~~~~ii~~~p~ 451 (493)
.....+|..|+++||+..|+.++..+.. . .+.++.+.+....+
T Consensus 366 ~~~~~~~~~~~~~~g~~~g~~~~~~~~gg~~~gp~l~G~l~~~~g 410 (438)
T TIGR00712 366 IGLHALELAPKKAAGTAAGFTGLFGYLGGSVAASAIVGYTVDFFG 410 (438)
T ss_pred HHHHHHHhcChhheeeehhhhchHHHhhhhhhcchhHHHHHHhcc
Confidence 2335678899999999999998887764 3 46688887776544
No 61
>PRK11010 ampG muropeptide transporter; Validated
Probab=99.27 E-value=2.3e-08 Score=108.21 Aligned_cols=352 Identities=12% Similarity=0.018 Sum_probs=188.9
Q ss_pred HHHHHHHHHHhhHHHHHHHHHHHHHhCCCchHHHHHHHHHHHHHHHhhhccceeeeccc-----chhHH-HHHHHHHHHH
Q 011118 22 LYVAHFLARWGARMWEFSVGLYMISVWPDSLLFAAIYGAVESASIALFGPIVGHWVDKL-----TYVKV-LQIWLVTQNL 95 (493)
Q Consensus 22 L~~s~~lS~~Gdr~~~Fa~~L~lv~l~~~sll~~sv~gl~~~l~~llfg~~vG~~vDr~-----~R~~v-~~~~~~~q~~ 95 (493)
++.-.+.+-...-+..-..|.++.+. .-++-..+...+ ...+. ++.+..|.++||+ +|||. +..+. ..
T Consensus 17 ~~~l~~~~gl~~~~~~~~l~~~l~~~-g~~~~~ig~~~~-~~~~~-~~~~l~gpl~Dr~~~~~~Grrr~~ll~~~---i~ 90 (491)
T PRK11010 17 LLILGFASGLPLALTSGTLQAWMTVE-NIDLKTIGFFSL-VGQAY-VFKFLWSPLMDRYTPPFLGRRRGWLLATQ---LL 90 (491)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhC-CCCHHHHHHHHH-HHHHH-HHHHHHHHHHHcccccCCCCchHHHHHHH---HH
Confidence 33333444445557777788876654 446666666533 23332 5788999999998 77775 44443 22
Q ss_pred HHHHHHHHHHHHHhhcccccchhHHHHHHHHHHHHHHHHHHhhhhhhhhhhccceEEEecCCCChhhhhhhhhHHHhHHH
Q 011118 96 SFIVAGVSVITLLFFSSLKSTNFIAFVLLVILTNISGAVGVISTLAGTILIEREWVVVISEGHPPEALTKMNSIIRRIDL 175 (493)
Q Consensus 96 ~v~~s~~~~~~~l~~~~~~~~~~~~~~~l~~~~~~~g~~~~l~~~a~~iaieRDWvv~i~~~~~~~~L~~~Na~mrriDl 175 (493)
. +++... .. ... ...+...+..+. .+.+......+++ ..+.--||. ++ ++..+.|+...-.-.
T Consensus 91 ~-~~~~~~-~a-~~~---~~~~l~~l~~~~---~l~~~~~a~~~i~-~~a~~~~~~----~~---~~rg~~~~i~~~g~~ 153 (491)
T PRK11010 91 L-LVAIAA-MG-FLE---PGTQLRWLAALA---VVIAFCSASQDIV-FDAWKTDVL----PA---EERGAGAAISVLGYR 153 (491)
T ss_pred H-HHHHHH-HH-HcC---CcchHHHHHHHH---HHHHHHHHHHHHH-HHHHHHHhc----Ch---hhhHHHHHHHHHHHH
Confidence 2 111111 11 111 112222222221 1223334444444 334455665 22 467888999988888
Q ss_pred HHHhhhhHHHHHHHH-hhhhHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCcchhhhhhhhccCCCcccccccCCcccccc
Q 011118 176 TCKLLAPAITGFIIS-FVSLQASAMTLAIWTTVTVWVEYWLFMSVYKGIPALAESSQRRIRRSMPIDMEQSTSMPRERES 254 (493)
Q Consensus 176 ~~~l~gP~~~G~l~~-~~s~~~a~~~i~~~n~~S~~ve~~~l~~Vy~~~p~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 254 (493)
+..++||.+.+.+.+ ..|.+....+.++...+.++. .. ..||..++ ++ + ++
T Consensus 154 lG~llg~~l~~~l~~~~~GWr~~f~i~a~l~ll~~l~----~~----~~~e~~~~--~~-----~---~~---------- 205 (491)
T PRK11010 154 LAMLVSGGLALWLADRYLGWQGMYWLMAALLIPCIIA----TL----LAPEPTDT--IP-----V---PK---------- 205 (491)
T ss_pred HHHHHHHHHHHHHHhcccCHHHHHHHHHHHHHHHHHH----HH----hcCCCccc--cc-----c---cc----------
Confidence 899999999999988 468777665444443333221 11 12332100 00 0 00
Q ss_pred ccccccchhHHHHHHHHHHHHhhhccccccccceeeecccchHHHHHHHHHHH-HhhhhhhHHHHHHH-HcCCCchHHHH
Q 011118 255 LLSHDENNAELAEKRWRWKIIDWISNAPCVGAWQVYLKQEVVLPGVSLALLFF-TVLSFGTLMTATLE-WEGIPAYIIGI 332 (493)
Q Consensus 255 ~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~y~~q~v~la~~alalLy~-tVL~f~~l~~~yl~-~~gls~~~iG~ 332 (493)
.. . + . ..+.++.++++|..+..+...++|. ........+..|+. ..|+++..+|.
T Consensus 206 ------~~-~--~-~-------------~~~~l~~~~~~~~~~~~ll~~~l~~~~~~~~~~~~~~~l~~~~G~s~~~~g~ 262 (491)
T PRK11010 206 ------TL-E--Q-A-------------VVAPLRDFFGRNNAWLILLLIVLYKLGDAFAMSLTTTFLIRGVGFDAGEVGL 262 (491)
T ss_pred ------ch-h--h-h-------------HHHHHHHHHcCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHH
Confidence 00 0 0 0 0111222334444443344444443 22233445667776 58999999999
Q ss_pred HH-HHHHHHHHHHHHHHHHHHhhhchhhhhHHHHHHHHHHHHHHHHHHhhcchHHHHHHHHHHHHhhhchhhhhhhhhhh
Q 011118 333 AR-GISATIGIAATILYPILQSRISTLRTGLWSIWSQWFCLLICVASIWIHNSLVAAYMLMVGVATSRLGLWMFDLSVIQ 411 (493)
Q Consensus 333 ~r-~~~av~GllgT~~~~~l~~riGl~r~g~~~~~~q~~~L~~~v~~~~~~~~~~s~~~l~~gi~~SR~GLw~fDl~~~~ 411 (493)
.. ..+.++++.|+++.+++.+|+|..|....+...+.++..........+.+..... ..+.+..+..-........
T Consensus 263 ~~~~~g~i~~iiG~ll~G~L~dr~g~~~~l~i~~~l~~l~~l~~~~l~~~~~~~~~l~---~~~~l~~~~~g~~~~~~~a 339 (491)
T PRK11010 263 VNKTLGLLATIVGALYGGILMQRLSLFRALMIFGILQGVSNAGYWLLSITDKNLYSMG---AAVFFENLCGGMGTAAFVA 339 (491)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHhccccHHHHH---HHHHHHHHHHHHHHHHHHH
Confidence 98 5888999999999999999999877665544433322211111111221221111 1111111110111233467
Q ss_pred hhhccCCCCcchhHHHHHHHHHHhh-HHHHHHHHHhccCC
Q 011118 412 QMQDLVPESDRCVVGGVQNSLQSTM-DLMAYTMGIIISNP 450 (493)
Q Consensus 412 l~Qe~vp~~~rG~v~gv~~sl~~~f-~l~~~~~~ii~~~p 450 (493)
+.++.+|++.+|+..|..+++.++. -++..+.|.+...-
T Consensus 340 ~~~~l~~~~~~~t~~gl~~s~~~lg~~~~~~~~G~l~~~~ 379 (491)
T PRK11010 340 LLMTLCNKSFSATQFALLSALSAVGRVYVGPVAGWFVEAH 379 (491)
T ss_pred HHHHHcCCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 7788889999999999888888776 44666777776543
No 62
>PRK15075 citrate-proton symporter; Provisional
Probab=99.26 E-value=5.3e-08 Score=103.23 Aligned_cols=361 Identities=9% Similarity=0.010 Sum_probs=181.3
Q ss_pred hhHHHHHHHHHHHHHhhHHHHHHHHHHHHHhCCCchH----HHHHHHHHH-HHHHHhhhccceeeecccchhHHHHHHHH
Q 011118 17 FLTTYLYVAHFLARWGARMWEFSVGLYMISVWPDSLL----FAAIYGAVE-SASIALFGPIVGHWVDKLTYVKVLQIWLV 91 (493)
Q Consensus 17 ~~~~~L~~s~~lS~~Gdr~~~Fa~~L~lv~l~~~sll----~~sv~gl~~-~l~~llfg~~vG~~vDr~~R~~v~~~~~~ 91 (493)
+..-.++.+.++....-....++.|.+..+..+...- ..+++.+.. .+...+.+.+.|.+.||++|||++..+.+
T Consensus 15 ~~~~~~~~~~~~~~~d~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ig~~~~G~l~Dr~Grr~~l~~~~~ 94 (434)
T PRK15075 15 RAILRVTSGNFLEMFDFFLFGFYATAIAKTFFPAGNEFASLMLTFAVFGAGFLMRPLGAIVLGAYIDRVGRRKGLIVTLS 94 (434)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCCchHHHHHHHHHHHHHHHHhhhHHHHHHHHhhhhchHHHHHHHHH
Confidence 3455667777777777778888999877777554322 122222222 22223446778999999999999988764
Q ss_pred HHHHHHHHHHHHHHHHHhhcccccchhHHHHHHHHHHHHHHHHHHhhhhhhhhhhccceEEEecCCCChhhhhhhhhHHH
Q 011118 92 TQNLSFIVAGVSVITLLFFSSLKSTNFIAFVLLVILTNISGAVGVISTLAGTILIEREWVVVISEGHPPEALTKMNSIIR 171 (493)
Q Consensus 92 ~q~~~v~~s~~~~~~~l~~~~~~~~~~~~~~~l~~~~~~~g~~~~l~~~a~~iaieRDWvv~i~~~~~~~~L~~~Na~mr 171 (493)
.-.+. +.+ ..+.++. ...+......+++.-.+.|.......++. ...-.||.| + ++..+.++...
T Consensus 95 ~~~~~----~~l--~~~~~~~-~~~~~~~~~~l~~~R~l~G~~~g~~~~~~-~~~~~e~~p----~---~~rg~~~~~~~ 159 (434)
T PRK15075 95 IMASG----TLL--IAFVPGY-ATIGLAAPLLVLLGRLLQGFSAGVELGGV-SVYLAEIAT----P---GRKGFYTSWQS 159 (434)
T ss_pred HHHHH----HHH--HHhCCcH-HHHHHHHHHHHHHHHHHhhccccccHHHH-HHHHHhhCC----c---ccchHHHHHHH
Confidence 33222 221 1111110 00000000011111122233332222221 233446653 3 45677788877
Q ss_pred hHHHHHHhhhhHHHHHHHH--------hhhhHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCcchhhhhhhhccCCCcccc
Q 011118 172 RIDLTCKLLAPAITGFIIS--------FVSLQASAMTLAIWTTVTVWVEYWLFMSVYKGIPALAESSQRRIRRSMPIDME 243 (493)
Q Consensus 172 riDl~~~l~gP~~~G~l~~--------~~s~~~a~~~i~~~n~~S~~ve~~~l~~Vy~~~p~L~~~~~~~~~~~~~~~~~ 243 (493)
......-.+||.+++.+.. ..|.+....+ +.+..++ +..+++..||-.+..+++ + +
T Consensus 160 ~~~~~g~~~g~~~g~~l~~~~~~~~~~~~gWr~~f~~----~~~~~~~----~~~~~~~~~e~~~~~~~~-----~---~ 223 (434)
T PRK15075 160 ASQQVAVVFAALLGYLLNQWLSPAQMAEWGWRIPFLI----GCLIVPF----IFLIRRSLEETEEFLARK-----H---R 223 (434)
T ss_pred HHHHHHHHHHHHHHHHHHHhCCHHHHhccchHHHHHH----HHHHHHH----HHHHHHhcCCCHHHHHhh-----h---c
Confidence 7788888889988888743 3455544422 2221111 111222333211000000 0 0
Q ss_pred cccCCccccccccccccchhHHHHHHHHHHHHhhhccccccccceeeeccc-chHHHHHHHHHH-HHhhhhhhHHHHHHH
Q 011118 244 QSTSMPRERESLLSHDENNAELAEKRWRWKIIDWISNAPCVGAWQVYLKQE-VVLPGVSLALLF-FTVLSFGTLMTATLE 321 (493)
Q Consensus 244 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~y~~q~-v~la~~alalLy-~tVL~f~~l~~~yl~ 321 (493)
+ + ..+-++...+++ .+..++...... .........++.|++
T Consensus 224 ~----------------------~---------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~l~ 266 (434)
T PRK15075 224 P----------------------S---------------MREIFRSLAANWRIVLAGMLMVAMTTVSFYLITVYTPTFGK 266 (434)
T ss_pred c----------------------c---------------cccHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 0 0 000001011111 122222211111 112234455788888
Q ss_pred H-cCCCchHHHHHHHHHHHHHHHHHHHHHHHHhhhchhhhhHHHHHHHHHHHHHHHHHHhhcch-HHHH--HHHHHHHHh
Q 011118 322 W-EGIPAYIIGIARGISATIGIAATILYPILQSRISTLRTGLWSIWSQWFCLLICVASIWIHNS-LVAA--YMLMVGVAT 397 (493)
Q Consensus 322 ~-~gls~~~iG~~r~~~av~GllgT~~~~~l~~riGl~r~g~~~~~~q~~~L~~~v~~~~~~~~-~~s~--~~l~~gi~~ 397 (493)
+ .|+++.+.+.+.....++++.++.+.+++.+|+|..|.-.++......+..+ ........+ .... ..++.+..
T Consensus 267 ~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~Dr~g~r~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~- 344 (434)
T PRK15075 267 TVLHLSAADSLLVTLCVGVSNFIWLPIGGALSDRIGRRPVLIAFTVLAILTAYP-ALSWLVAAPSFARMLAVELWLSFL- 344 (434)
T ss_pred HhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcchHHHHHHHHHHHHHHHH-HHHHHHcCCchHHHHHHHHHHHHH-
Confidence 6 7999999998888888999999999999999999766554433211111110 111111111 1111 11222222
Q ss_pred hhchhhhhhhhhhhhhhccCCCCcchhHHHHHHHHHHhh--HHHHHHHHHhccCCC
Q 011118 398 SRLGLWMFDLSVIQQMQDLVPESDRCVVGGVQNSLQSTM--DLMAYTMGIIISNPQ 451 (493)
Q Consensus 398 SR~GLw~fDl~~~~l~Qe~vp~~~rG~v~gv~~sl~~~f--~l~~~~~~ii~~~p~ 451 (493)
.| .+......+.+|..|+++||+..|...++.... -++.++.+.+....+
T Consensus 345 --~g--~~~~~~~~~~~e~~p~~~rg~~~g~~~~~~~~~~g~~~p~~~g~i~~~~g 396 (434)
T PRK15075 345 --YG--SYNGAMVVALTEVMPAEVRTAGFSLAYSLATAIFGGFTPAISTWLIHVTG 396 (434)
T ss_pred --HH--HHHhhHHHHHHHHCCCCccchheeHHHHHHHHHHhhhHHHHHHHHHHhcC
Confidence 22 334445567899999999999999876655532 445666666665544
No 63
>TIGR00896 CynX cyanate transporter. This family of proteins is involved in active transport of cyanate. The cyanate transporter in E.Coli is used to transport cyanate into the cell so it can be metabolized into ammonia and bicarbonate. This process is used to overcome the toxicity of environmental cyanate.
Probab=99.22 E-value=1.1e-08 Score=104.88 Aligned_cols=325 Identities=13% Similarity=0.001 Sum_probs=177.1
Q ss_pred HHHHHHHHHHHhCCCchHHHHHHHHHHHHHHHhhhccceeeecccchhHHHHHHHHHHHHHHHHHHHHHHHHHhhccccc
Q 011118 36 WEFSVGLYMISVWPDSLLFAAIYGAVESASIALFGPIVGHWVDKLTYVKVLQIWLVTQNLSFIVAGVSVITLLFFSSLKS 115 (493)
Q Consensus 36 ~~Fa~~L~lv~l~~~sll~~sv~gl~~~l~~llfg~~vG~~vDr~~R~~v~~~~~~~q~~~v~~s~~~~~~~l~~~~~~~ 115 (493)
+.-.+|.+ .+-++-|....+.......+...+.+++.|.+.||++|||++..+.+...+. .. .... .
T Consensus 19 ~~~~lp~l-~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~----~~---~~~~-----~ 85 (355)
T TIGR00896 19 VGPLLPQI-RSALGMSFSVAGLLTALPVLCFAVLAPLAPWLARRFGEERSVAAGLLLIAAG----IL---IRSA-----P 85 (355)
T ss_pred CcccHHHH-HHHhCCCHHHHHHHHHHHHHHHHHHHHhHHHHHHHhCchHHHHHHHHHHHHH----HH---HHHh-----c
Confidence 33456664 4455668888899999999999999999999999999999988776432222 11 1111 1
Q ss_pred chhHHHHHHHHHHHHHHHHHHhhhhhhhhhhccceEEEecCCCChhhhhhhhhHHHhHHHHHHhhhhHHHHHHHHhhh--
Q 011118 116 TNFIAFVLLVILTNISGAVGVISTLAGTILIEREWVVVISEGHPPEALTKMNSIIRRIDLTCKLLAPAITGFIISFVS-- 193 (493)
Q Consensus 116 ~~~~~~~~l~~~~~~~g~~~~l~~~a~~iaieRDWvv~i~~~~~~~~L~~~Na~mrriDl~~~l~gP~~~G~l~~~~s-- 193 (493)
..+..+ +...+.|........+.. .+-+||.+ ++..+.++.....-..+..+||.+++.+.+..+
T Consensus 86 ~~~~l~----~~~~~~g~g~~~~~~~~~-~~~~~~~~--------~~~~~~~~~~~~~~~~g~~i~~~~~~~l~~~~~~~ 152 (355)
T TIGR00896 86 GTALLF----AGTALIGVGIAIINVLLP-SLIKRDFP--------QRVGLMTGLYSMALMGGAALAAAATVPLAQHSGGH 152 (355)
T ss_pred cHHHHH----HHHHHHHHHHHHHhccch-HHHHHhCc--------chhhHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhh
Confidence 111111 111122322222222212 22244531 345677777777777888889999888877543
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCcchhhhhhhhccCCCcccccccCCccccccccccccchhHHHHHHHHHH
Q 011118 194 LQASAMTLAIWTTVTVWVEYWLFMSVYKGIPALAESSQRRIRRSMPIDMEQSTSMPRERESLLSHDENNAELAEKRWRWK 273 (493)
Q Consensus 194 ~~~a~~~i~~~n~~S~~ve~~~l~~Vy~~~p~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 273 (493)
.+.......+...+. .+. ..|+.+++ +++.++ .
T Consensus 153 w~~~f~~~~~~~~~~------~~~----~~~~~~~~---------~~~~~~----------------------~------ 185 (355)
T TIGR00896 153 WQQALAWWALPALLA------LLA----WIPQVRRR---------VAANQT----------------------T------ 185 (355)
T ss_pred HHHHHHHHHHHHHHH------HHH----Hhhhhccc---------cCCCCC----------------------C------
Confidence 333322222211111 111 12221100 000000 0
Q ss_pred HHhhhccccccccceeeecccchHHHHHHHHHH-HHhhhhhhHHHHHHHHcCCCchHHHHHHHHHHHHHHHHHHHHHHHH
Q 011118 274 IIDWISNAPCVGAWQVYLKQEVVLPGVSLALLF-FTVLSFGTLMTATLEWEGIPAYIIGIARGISATIGIAATILYPILQ 352 (493)
Q Consensus 274 ~~~~l~~~~~~~g~~~y~~q~v~la~~alalLy-~tVL~f~~l~~~yl~~~gls~~~iG~~r~~~av~GllgT~~~~~l~ 352 (493)
....++..+++|.++.......++ +...++...+..|+++.|.++...|.+.++..+++++|++..+++.
T Consensus 186 ---------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lp~~~~~~g~~~~~~g~~~~~~~~~~i~~~~~~g~l~ 256 (355)
T TIGR00896 186 ---------TRLTPVRIWRSPLAWQVTVFFGLQSGLYYSLIGWLPAILISHGASAATAGSLLALMQLAQAASALLIPALA 256 (355)
T ss_pred ---------CCCCCchhhcCHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHhHHHHH
Confidence 001223334566555433333333 2233455667788888999999999999999999999999999999
Q ss_pred hhhchhh-hhHHHHHHHHHHHHHHHHHHhhcchHHHHHHHHHHHHhhhchhhhhhhhh-hhhhhccCCCCcchhHHHHHH
Q 011118 353 SRISTLR-TGLWSIWSQWFCLLICVASIWIHNSLVAAYMLMVGVATSRLGLWMFDLSV-IQQMQDLVPESDRCVVGGVQN 430 (493)
Q Consensus 353 ~riGl~r-~g~~~~~~q~~~L~~~v~~~~~~~~~~s~~~l~~gi~~SR~GLw~fDl~~-~~l~Qe~vp~~~rG~v~gv~~ 430 (493)
+|++-.| ...++.....++. +...+.+......... +..+|.-..-... ..+.|+..+++++|+..|..+
T Consensus 257 dr~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~-----l~g~~~g~~~~~~~~~~~~~~~~~~~~g~~~~~~~ 328 (355)
T TIGR00896 257 RRVKDQRGIVAVLAVLQLVGL---CGLLFAPMHGLWAWAL-----VLGLGQGGAFPLALTLIGLRSRQAAQAAALSAMAQ 328 (355)
T ss_pred hhhccchHHHHHHHHHHHHHH---HHHHHhhhhHHHHHHH-----HHHHhhhhHhHHHHHHHHHhccCHHHHHHHHHHHH
Confidence 9996443 4444433221111 1112222211111222 2233333333333 334455566778899999888
Q ss_pred HHHHhh-HHHHHHHHHhccCC
Q 011118 431 SLQSTM-DLMAYTMGIIISNP 450 (493)
Q Consensus 431 sl~~~f-~l~~~~~~ii~~~p 450 (493)
++.++. -++..+.+.+...-
T Consensus 329 ~~~~~~~~~gp~~~G~l~~~~ 349 (355)
T TIGR00896 329 SIGYLLAALGPLFVGVLHDIS 349 (355)
T ss_pred HHHHHHHHHHHHHHHHHHHHh
Confidence 877665 45666666665433
No 64
>PRK10429 melibiose:sodium symporter; Provisional
Probab=99.22 E-value=1.7e-08 Score=108.53 Aligned_cols=358 Identities=11% Similarity=0.055 Sum_probs=188.6
Q ss_pred HHHHHHHHhhHHHHHHHHHHHHHhCCCchHHHHHHHHHHHHHHHhhhccceeeeccc----ch-hHHHHHHHHHHHHHHH
Q 011118 24 VAHFLARWGARMWEFSVGLYMISVWPDSLLFAAIYGAVESASIALFGPIVGHWVDKL----TY-VKVLQIWLVTQNLSFI 98 (493)
Q Consensus 24 ~s~~lS~~Gdr~~~Fa~~L~lv~l~~~sll~~sv~gl~~~l~~llfg~~vG~~vDr~----~R-~~v~~~~~~~q~~~v~ 98 (493)
.+++-...-..+...-.+.|..+...-+...+|..-++..+.-.+..|.+|.+.||. +| |+-+..+.+...++
T Consensus 13 ~g~~~~~~~~~~~~~~l~~yyt~v~Gls~~~vg~i~~i~ri~dai~dp~~G~lsD~t~sr~Grrrp~il~g~i~~~i~-- 90 (473)
T PRK10429 13 FGAFGKDFAIGIVYMYLMYYYTDVVGLSVGLVGTLFLVARIWDAINDPIMGWIVNNTRSRWGKFKPWILIGTLANSVV-- 90 (473)
T ss_pred cchhHHhHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHhhchheeehhcCCCCCCCcchhHhhhhHHHHHH--
Confidence 344444444444333356666677777888888888888888899999999999954 55 56665554333222
Q ss_pred HHHHHHHHHHhhcccccc-hhHHHHHHHHHHHHHHHHHHhhhhhhhhhhccceEEEecCCCChhhhhhhhhHHHhHHHHH
Q 011118 99 VAGVSVITLLFFSSLKST-NFIAFVLLVILTNISGAVGVISTLAGTILIEREWVVVISEGHPPEALTKMNSIIRRIDLTC 177 (493)
Q Consensus 99 ~s~~~~~~~l~~~~~~~~-~~~~~~~l~~~~~~~g~~~~l~~~a~~iaieRDWvv~i~~~~~~~~L~~~Na~mrriDl~~ 177 (493)
.. ++..++..... .+.++.+.+ ++.+....+.++.... +++.++++ + ++.+++|+.-|-.-.+.
T Consensus 91 --~~---llf~~p~~~~~~~~~~~~~~~---~l~~~~~t~~~ip~~a-----l~~~lt~~-~-~eR~~l~~~~~~~~~ig 155 (473)
T PRK10429 91 --LF---LLFSAHLFEGTAQYVFVCVTY---ILWGMTYTIMDIPFWS-----LVPTLTLD-K-REREQLVPYPRFFASLA 155 (473)
T ss_pred --HH---HHHcCCCCCccHHHHHHHHHH---HHHHHHHHHHcchHHh-----hhHHhCCC-H-HHHHHHHHHHHHHHHHH
Confidence 11 11222111111 111211111 1223334444444332 26777654 3 67889998844445555
Q ss_pred HhhhhHHHHHHHHhhh---hHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCcchhhhhhhhccCCCcccccccCCcccccc
Q 011118 178 KLLAPAITGFIISFVS---LQASAMTLAIWTTVTVWVEYWLFMSVYKGIPALAESSQRRIRRSMPIDMEQSTSMPRERES 254 (493)
Q Consensus 178 ~l~gP~~~G~l~~~~s---~~~a~~~i~~~n~~S~~ve~~~l~~Vy~~~p~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 254 (493)
.++++.+...+.+..| ...+........++...+-.++ .+...+|-.. +++.++ +
T Consensus 156 ~~~~~~~~~~~~~~~g~~~~~~g~~~~~~i~~~~~~~~~~~---~~~~~~e~~~----------~~~~~~-----~---- 213 (473)
T PRK10429 156 GFVTAGFTLPFVNYVGGGDRGFGFQMFTLVLIAFFIVSTII---TLRNVHEVYS----------SDNQVS-----A---- 213 (473)
T ss_pred HHHHHHHHHHHHHHhCCCchhhhHHHHHHHHHHHHHHHHHH---HHcCceecCC----------cccccc-----c----
Confidence 5666666555444332 1111111112222222211111 1112232110 000000 0
Q ss_pred ccccccchhHHHHHHHHHHHHhhhccccccccceeeecccchHHHHHHHHHHHHhh-hhhhHHHHHHHHcCCCchHHHHH
Q 011118 255 LLSHDENNAELAEKRWRWKIIDWISNAPCVGAWQVYLKQEVVLPGVSLALLFFTVL-SFGTLMTATLEWEGIPAYIIGIA 333 (493)
Q Consensus 255 ~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~y~~q~v~la~~alalLy~tVL-~f~~l~~~yl~~~gls~~~iG~~ 333 (493)
+++.. ..++.++..++||.++..+...+++.... ...+.+.-|.+...-++...+.+
T Consensus 214 ---~~~~~-------------------~~~~~~~~~~~n~~~~~ll~~~~~~~~~~~~~~~~~~y~~~y~~~~~~~~~~~ 271 (473)
T PRK10429 214 ---EGSHL-------------------TLKDIVALIYKNDQLSCLLGMALAYNIASNIINGFAIYYFTYVIGDADLFPYY 271 (473)
T ss_pred ---cccCC-------------------CHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHhhheeeEEEEECCCHHHHHHH
Confidence 00000 02344555568888887777776664332 34444554555433467788888
Q ss_pred HHHHHHHHHHHHHHHHHHHhhhchhhhhHHHHHHHHHHHHHHHHHHh---hcchHHHHHHHHHHHHhhhchhhhhhhhhh
Q 011118 334 RGISATIGIAATILYPILQSRISTLRTGLWSIWSQWFCLLICVASIW---IHNSLVAAYMLMVGVATSRLGLWMFDLSVI 410 (493)
Q Consensus 334 r~~~av~GllgT~~~~~l~~riGl~r~g~~~~~~q~~~L~~~v~~~~---~~~~~~s~~~l~~gi~~SR~GLw~fDl~~~ 410 (493)
.+..++.++++..+.+++.||+|-.++-.++... +...++...+ .+.. ....++...++..+|.-.+.....
T Consensus 272 ~~~~~i~~ii~~~~~~~l~~r~gkk~~~~~~~~~---~~~~~~~~~~~~~~~~~--~~~~~~i~~~l~g~~~~~~~~~~~ 346 (473)
T PRK10429 272 LSYAGAANLVTLILFPRLVKSLSRRILWAGASIF---PVLSCGVLLLMGLAAPH--NALLIVIAGILLNIGTALFWVLQV 346 (473)
T ss_pred HHHHHHHHHHHHHHHHHHHHHcCcHHHHHHHHHH---HHHHHHHHHHHhccCch--hHHHHHHHHHHHHHHHHHHHHHHH
Confidence 8888899999999999999999988876655542 1211111111 1211 122233344445566666778888
Q ss_pred hhhhccCCCC--cch-----hHHHHHHHHHHhh-HHHHHHHHHhc
Q 011118 411 QQMQDLVPES--DRC-----VVGGVQNSLQSTM-DLMAYTMGIII 447 (493)
Q Consensus 411 ~l~Qe~vp~~--~rG-----~v~gv~~sl~~~f-~l~~~~~~ii~ 447 (493)
.+++|.+|++ +.| .++|.+...+.+. .++..+.+.+.
T Consensus 347 am~ad~id~~e~~tG~R~~G~~~s~~~~~~K~~~al~~~i~g~~l 391 (473)
T PRK10429 347 IMVADTVDYGEYKLGIRCESIAYSVQTMVVKGGSAFAAFFIGVVL 391 (473)
T ss_pred HHHhhhhhhhhHhcCccchhHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 8999998843 234 4777777766666 66666666543
No 65
>PRK09848 glucuronide transporter; Provisional
Probab=99.21 E-value=3.5e-08 Score=104.91 Aligned_cols=358 Identities=10% Similarity=0.002 Sum_probs=186.6
Q ss_pred cchhhHHHHHHHHHHHHHhhHHHHHHHHHHHHHhCCCchHHHHHHHHHHHHHHHhhhccceeeeccc----chhH-HHHH
Q 011118 14 ITSFLTTYLYVAHFLARWGARMWEFSVGLYMISVWPDSLLFAAIYGAVESASIALFGPIVGHWVDKL----TYVK-VLQI 88 (493)
Q Consensus 14 ~~~~~~~~L~~s~~lS~~Gdr~~~Fa~~L~lv~l~~~sll~~sv~gl~~~l~~llfg~~vG~~vDr~----~R~~-v~~~ 88 (493)
.+.+....+-.+++..+.+..+...-++.++.....-+...+|...+...+...+.+|.+|.++||. +||| .+..
T Consensus 5 ~~~~~~~~yg~g~~~~~~~~~~~~~~l~~y~~~~~gl~~~~~g~~~~~~~~~~~~~~~~~G~l~Dr~~~~~Gr~~~~~~~ 84 (448)
T PRK09848 5 LSWRTIVGYSLGDVANNFAFAMGALFLLSYYTDVAGVGAAAAGTMLLLVRVFDAFADVFAGRVVDSVNTRWGKFRPFLLF 84 (448)
T ss_pred ccHHHHHhhccchHHhHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHhhhhheeeeecCCCCCcCchHHHHH
Confidence 3433333333677777777666544455678888777889999999999999999999999999996 3344 3333
Q ss_pred HHHHHHHHHHHHHHHHHHHHhhccccc-chhHHHHHHHHHHHHHHHHHHhhhhhhhhhhccceEEEecCCCChhhhhhhh
Q 011118 89 WLVTQNLSFIVAGVSVITLLFFSSLKS-TNFIAFVLLVILTNISGAVGVISTLAGTILIEREWVVVISEGHPPEALTKMN 167 (493)
Q Consensus 89 ~~~~q~~~v~~s~~~~~~~l~~~~~~~-~~~~~~~~l~~~~~~~g~~~~l~~~a~~iaieRDWvv~i~~~~~~~~L~~~N 167 (493)
+. +...+++.+ ....+..... ..+.++...+ .+.++...+..+..... ...++.++ ++.++.|
T Consensus 85 ~~----~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~al-----~~~~~~~~--~~r~~~~ 148 (448)
T PRK09848 85 GT----APLMIFSVL--VFWVPTDWSHSSKVVYAYLTY---MGLGLCYSLVNIPYGSL-----ATAMTQQP--QSRARLG 148 (448)
T ss_pred HH----HHHHHHHHH--HHhCcCCCCcchHHHHHHHHH---HHHHHHHHHhcccHhhh-----hhhhcCCH--HHHHHHH
Confidence 32 111222221 1112211111 1111111111 12344444555443322 34444432 3445544
Q ss_pred hHHHhH------HHHHHhhhhHHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCcchhhhhhhhccCCCcc
Q 011118 168 SIIRRI------DLTCKLLAPAITGFIISFVSLQASAMTLAIWTTVTVWVEYWLFMSVYKGIPALAESSQRRIRRSMPID 241 (493)
Q Consensus 168 a~mrri------Dl~~~l~gP~~~G~l~~~~s~~~a~~~i~~~n~~S~~ve~~~l~~Vy~~~p~L~~~~~~~~~~~~~~~ 241 (493)
+ .|.+ -...-.++|++.+..-+........+. ...-++..+ +....+...||-.+ + +
T Consensus 149 ~-~r~~~~~~~~~~~~~~~~p~i~~~~g~~~~~~~~~~~-~~~~v~~~~----~~~~~~~~~~e~~~----------~-~ 211 (448)
T PRK09848 149 A-ARGIAASLTFVCLAFLIGPSIKNSSPEEMVSVYHFWT-IVLAIAGMV----LYFICFKSTRENVV----------R-I 211 (448)
T ss_pred H-HHHHHHHHHHHHHHHHHHHHHHHhCCCchhhhHHHHH-HHHHHHHHH----HHHHHHcCcEeccC----------C-C
Confidence 3 3442 234555666665532110000000000 011111111 11122223332110 0 0
Q ss_pred cccccCCccccccccccccchhHHHHHHHHHHHHhhhccccccccceeeecccchHHHHHHHHHHHHh-hhhhhHHHHHH
Q 011118 242 MEQSTSMPRERESLLSHDENNAELAEKRWRWKIIDWISNAPCVGAWQVYLKQEVVLPGVSLALLFFTV-LSFGTLMTATL 320 (493)
Q Consensus 242 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~y~~q~v~la~~alalLy~tV-L~f~~l~~~yl 320 (493)
++ ..+ +.+.++..+++|.++......++++.. ..+.....-|.
T Consensus 212 -~~----------------~~~-------------------~~~~~~~l~~n~~f~~~~~~~~~~~~~~~~~~~~~~~~~ 255 (448)
T PRK09848 212 -VA----------------QPS-------------------LKISLQTLKRNRPLFMLCIGALCVLISTFAVSASSLFYV 255 (448)
T ss_pred -cc----------------CCC-------------------HHHHHHHHhCCchHHHHHHHHHHHHHHHHHHhhhheeeE
Confidence 00 000 123344556888887777666666433 34555555566
Q ss_pred HH-cCCCchHHHHHHHHHHHHHHHHHHHHHHHHhhhchhhhhHHHHHHHHHHHHHHHHHHhhcchHHHHHHHHHHHHhhh
Q 011118 321 EW-EGIPAYIIGIARGISATIGIAATILYPILQSRISTLRTGLWSIWSQWFCLLICVASIWIHNSLVAAYMLMVGVATSR 399 (493)
Q Consensus 321 ~~-~gls~~~iG~~r~~~av~GllgT~~~~~l~~riGl~r~g~~~~~~q~~~L~~~v~~~~~~~~~~s~~~l~~gi~~SR 399 (493)
.+ .|.++..-+++...+.++.++++.+.+++.+|+|..+.-.++.. ++...++...+.+.. +...+.....+..
T Consensus 256 ~~~~g~~~~~~~~~~~~~~~~~~~~~~l~~~l~~r~g~~~~~~~g~~---~~~i~~~~~~~~~~~--~~~~~~~~~~l~g 330 (448)
T PRK09848 256 RYVLNDTGLFTVLVLVQNLVGTVASAPLVPGMVARIGKKNTFLIGAL---LGTCGYLLFFWVSVW--SLPVALVALAIAS 330 (448)
T ss_pred eeecCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcHHHHHHHHH---HHHHHHHHHHHcCch--hHHHHHHHHHHHH
Confidence 64 78776655555555577788899999999999998887776664 222222222233211 1222333445556
Q ss_pred chhhhhhhhhhhhhhccCCCCc-------chhHHHHHHHHHHhh-HHHHHHHHH
Q 011118 400 LGLWMFDLSVIQQMQDLVPESD-------RCVVGGVQNSLQSTM-DLMAYTMGI 445 (493)
Q Consensus 400 ~GLw~fDl~~~~l~Qe~vp~~~-------rG~v~gv~~sl~~~f-~l~~~~~~i 445 (493)
+|...+......+.++.+|+++ +|..+|+++..+.+. -++..+.+.
T Consensus 331 ~G~~~~~~~~~al~~~~~~~~~~~~g~r~~G~~~~~~~~~~klg~aig~~i~g~ 384 (448)
T PRK09848 331 IGQGVTMTVMWALEADTVEYGEYLTGVRIEGLTYSLFSFTRKCGQAIGGSIPAF 384 (448)
T ss_pred HHHHHHHHHHHHHHHHhhhhhHHhhCccchhHHHHHHHHHHHHHHHHHHHHHHH
Confidence 7777778888888888887654 588888887777666 444444443
No 66
>PRK10642 proline/glycine betaine transporter; Provisional
Probab=99.21 E-value=7.2e-08 Score=104.07 Aligned_cols=134 Identities=9% Similarity=0.018 Sum_probs=80.9
Q ss_pred hhhhHHHHHHH-HcCCCchHHHHHHHHHHHHHHHHHHHHHHHHhhhchhhhhHHHHHHHHHHHHHHHHHH-hhcchHHHH
Q 011118 311 SFGTLMTATLE-WEGIPAYIIGIARGISATIGIAATILYPILQSRISTLRTGLWSIWSQWFCLLICVASI-WIHNSLVAA 388 (493)
Q Consensus 311 ~f~~l~~~yl~-~~gls~~~iG~~r~~~av~GllgT~~~~~l~~riGl~r~g~~~~~~q~~~L~~~v~~~-~~~~~~~s~ 388 (493)
++...++.|++ ..|+++...+.......++.+++..+.+++.+|+|-.+...++.. .+...++... ...... .
T Consensus 268 ~~~~~~p~~l~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~grr~~~~~~~~---~~~~~~~~~~~~~~~~~--~ 342 (490)
T PRK10642 268 MLLTYMPSYLSHNLHYSEDHGVLIIIAIMIGMLFVQPVMGLLSDRFGRRPFVILGSV---ALFVLAIPAFILINSNV--I 342 (490)
T ss_pred HHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccHHHHHHHHH---HHHHHHHHHHHHHhCCC--H
Confidence 44456778886 479998888877778888889999999999999997665544332 1111111111 111111 1
Q ss_pred HHHHHHHHhhhchhhhhhhhhhhhhhccCCCCcchhHHHHHHHHHHhh-HHHHHHHHHhccC
Q 011118 389 YMLMVGVATSRLGLWMFDLSVIQQMQDLVPESDRCVVGGVQNSLQSTM-DLMAYTMGIIISN 449 (493)
Q Consensus 389 ~~l~~gi~~SR~GLw~fDl~~~~l~Qe~vp~~~rG~v~gv~~sl~~~f-~l~~~~~~ii~~~ 449 (493)
..+..+.++..++.-.+.-....+..|..|++.||+..|+...+.... -++.++.+.+...
T Consensus 343 ~~~~~~~~~~g~~~~~~~g~~~~~~~~~~p~~~Rg~~~g~~~~~~~~~g~~~p~i~g~l~~~ 404 (490)
T PRK10642 343 GLIFAGLLMLAVILNCFTGVMASTLPAMFPTHIRYSALAAAFNISVLVAGLTPTLAAWLVES 404 (490)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCccchHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 112222222222222223344556678899999999888766665555 6677777766543
No 67
>TIGR02332 HpaX 4-hydroxyphenylacetate permease. This protein is a part of the Major Facilitator Superfamily (Pfam family pfam07690). Member of this family are found in a number of proteobacterial genomes, but only in the context of having genes for 4-hydroxyphenylacetate (4-HPA) degradation. The protein is characterized by Prieto, et al. (PubMed:9315705) as 4-hydroxyphenylacetate permease in E. coli, where 3-HPA and 3,4-dihydroxyphenylacetate are shown to competitively inhibit 4-HPA transport and therefore also interact specificially.
Probab=99.19 E-value=2.2e-08 Score=105.61 Aligned_cols=382 Identities=12% Similarity=0.064 Sum_probs=203.5
Q ss_pred cchhhHHHHHHHHHHHHHhhHHHHHHHHHHHHHhCCCchHHHHHHHHHHHHHHHhhhccceeeecccchhHHHHHHHHHH
Q 011118 14 ITSFLTTYLYVAHFLARWGARMWEFSVGLYMISVWPDSLLFAAIYGAVESASIALFGPIVGHWVDKLTYVKVLQIWLVTQ 93 (493)
Q Consensus 14 ~~~~~~~~L~~s~~lS~~Gdr~~~Fa~~L~lv~l~~~sll~~sv~gl~~~l~~llfg~~vG~~vDr~~R~~v~~~~~~~q 93 (493)
.+.+.+..++...++..+.-..-.++.|. +.+-++-|....+....+-.+...+..++.|.+.||++||+++..+.+.-
T Consensus 5 ~~~~~~~~~~~~~~~~~~d~~~~~~~~~~-l~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~G~r~~~~~~~~~~ 83 (412)
T TIGR02332 5 LFRRLIIFLFILFIFSFLDRINIGFAGLT-MGKDLGLSATMFGLAATLFYAAYVICGIPSNIMLAIIGARRWIAGIMVLW 83 (412)
T ss_pred ehhHHHHHHHHHHHHHHhhhhhHHHHHHh-hHhhcCCCHHHHHHHHHHHHHHHHHHHhhHHHHHHHhChHHHHHHHHHHH
Confidence 34456777888888877777778888885 55566778888888888889999999999999999999999987776433
Q ss_pred HHHHHHHHHHHHHHHhhcccccchhHHHHHHHHHHHHHHHHHHhhhhhhhhhhccceEEEecCCCChhhhhhhhhHHHhH
Q 011118 94 NLSFIVAGVSVITLLFFSSLKSTNFIAFVLLVILTNISGAVGVISTLAGTILIEREWVVVISEGHPPEALTKMNSIIRRI 173 (493)
Q Consensus 94 ~~~v~~s~~~~~~~l~~~~~~~~~~~~~~~l~~~~~~~g~~~~l~~~a~~iaieRDWvv~i~~~~~~~~L~~~Na~mrri 173 (493)
.+. +.+ ..+. .++..+... -.+.|..+....++.. .+-.||.+ + ++..+.++.....
T Consensus 84 ~~~----~~~--~~~~------~~~~~l~~~---r~l~G~~~~~~~~~~~-~~~~~~~~----~---~~rg~~~~~~~~~ 140 (412)
T TIGR02332 84 GIA----STA--TMFA------TGPESLYLL---RILVGIAEAGFLPGIL-LYLTFWFP----A---YFRARANALFMIA 140 (412)
T ss_pred HHH----HHH--HHHh------cCHHHHHHH---HHHHHHHHhhHHHHHH-HHHHHHcC----H---HHHHHHHHHHHHH
Confidence 332 111 1111 112222111 1233444444444433 33467762 2 4567788888877
Q ss_pred HHHHHhhhhHHHHHHHH------hhhhHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCcc----hhhhhhhhccCCCcccc
Q 011118 174 DLTCKLLAPAITGFIIS------FVSLQASAMTLAIWTTVTVWVEYWLFMSVYKGIPAL----AESSQRRIRRSMPIDME 243 (493)
Q Consensus 174 Dl~~~l~gP~~~G~l~~------~~s~~~a~~~i~~~n~~S~~ve~~~l~~Vy~~~p~L----~~~~~~~~~~~~~~~~~ 243 (493)
-..+.++||.++|.+.. ..|.+....+.++.-++..++ .....+..|+- .+++++...+ +. +.+
T Consensus 141 ~~~g~~~~~~~~~~l~~~~~~~~~~gwr~~f~~~~~~~l~~~~~----~~~~~~~~p~~~~~l~~~~~~~~~~-~~-~~~ 214 (412)
T TIGR02332 141 MPVTMALGLILSGYILALDGLMALKGWQWLFLLEGFPSVILGVM----TWFWLDDSPDKAKWLDEEDKKALKE-MI-DND 214 (412)
T ss_pred HHHHHHHHHHHHHHHHhCCCCCCccchhHHHHHHHHHHHHHHHH----HhhccCCCcccCCCCCHHHHHHHHH-HH-Hhc
Confidence 78889999999998874 246666654333333332221 11111222210 0000000000 00 000
Q ss_pred cccCCccccccccccccchhHHHHHHHHHHHHhhhccccccccceeeecccchH-HHHHHHHHHHHhhhhhhHHHHHHHH
Q 011118 244 QSTSMPRERESLLSHDENNAELAEKRWRWKIIDWISNAPCVGAWQVYLKQEVVL-PGVSLALLFFTVLSFGTLMTATLEW 322 (493)
Q Consensus 244 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~y~~q~v~l-a~~alalLy~tVL~f~~l~~~yl~~ 322 (493)
.. + .++.++...+ ++. + .++-|+..++ |.++ ..+...+.+....++.+-++.|+.+
T Consensus 215 ~~-----~----~~~~~~~~~~-~~~--~----------~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~p~~l~~ 271 (412)
T TIGR02332 215 QL-----T----LEQPEGAFAH-AAM--P----------QRSMLREIFT-PAIMLYTLAYFCLTNTLSAINIWTPQILQS 271 (412)
T ss_pred cc-----c----cccccccccc-ccc--c----------HHHHHHHhcC-hHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 00 0 0000000000 000 0 0011221222 2222 1222222222223455667788876
Q ss_pred c--CCCchHHHHHHHHHHHHHHHHHHHHHHHHhhhchhhhhH-HHHHHHHHHHHHHHHHHhhcchHHHHHHHHHHHHhhh
Q 011118 323 E--GIPAYIIGIARGISATIGIAATILYPILQSRISTLRTGL-WSIWSQWFCLLICVASIWIHNSLVAAYMLMVGVATSR 399 (493)
Q Consensus 323 ~--gls~~~iG~~r~~~av~GllgT~~~~~l~~riGl~r~g~-~~~~~q~~~L~~~v~~~~~~~~~~s~~~l~~gi~~SR 399 (493)
. |+++...|.+-+.-.++++.|+++.+++..|++..|... .......+.+ ++. ...+.+......+. +.-
T Consensus 272 ~~~~~s~~~~~~~~~~~~l~~~~g~l~~g~l~dr~~~r~~~~~~~~~~~~~~~--~~~-~~~~~~~~~~~~~~----~~~ 344 (412)
T TIGR02332 272 FNQGSSNIMIGLLAAIPQFCTIFGMIWWSRHSDRLKERKHHTALPYLFAAAGW--LLA-SATDHNLIQLLGII----MAS 344 (412)
T ss_pred cCCCCcHHHhHHHhhHHHHHHHHHHHHHHHHhcccCccHHHHHHHHHHHHHHH--HHH-HhcCCHHHHHHHHH----HHH
Confidence 3 678889999999999999999999999999998544321 1111111111 111 11121221111111 111
Q ss_pred chhhhhhhhhhhhhhccCCCCcchhHHHHHHHHHHhh-HHHHHHHHHhccCCCCchH
Q 011118 400 LGLWMFDLSVIQQMQDLVPESDRCVVGGVQNSLQSTM-DLMAYTMGIIISNPQDFWK 455 (493)
Q Consensus 400 ~GLw~fDl~~~~l~Qe~vp~~~rG~v~gv~~sl~~~f-~l~~~~~~ii~~~p~~F~~ 455 (493)
+|...--.......+|..|+++||++.|+.++..++. -++.++.+.+....+.+.+
T Consensus 345 ~g~~~~~~~~~~~~~~~~~~~~~~~a~g~~~~~~~~g~~~~p~~~g~i~~~~g~~~~ 401 (412)
T TIGR02332 345 MGSFSAMAIFWTTPDQSISLQARAIAIAVINATGNIGSALSPFLIGILKDATGSFNS 401 (412)
T ss_pred HHhhhhhhHHHhhcccccchHHHHHHHHHHHHhhhhhhhhhhhhcccccccCCCCch
Confidence 2221111112244467789999999999999998877 5666777788777665444
No 68
>PF13347 MFS_2: MFS/sugar transport protein
Probab=99.18 E-value=1.1e-08 Score=108.21 Aligned_cols=334 Identities=11% Similarity=0.104 Sum_probs=189.2
Q ss_pred HHHHHHHHhCCCchHHHHHHHHHHHHHHHhhhccceeeec----ccchhH-HHHHHHHHHHHHHHHHHHHHHHHHhhccc
Q 011118 39 SVGLYMISVWPDSLLFAAIYGAVESASIALFGPIVGHWVD----KLTYVK-VLQIWLVTQNLSFIVAGVSVITLLFFSSL 113 (493)
Q Consensus 39 a~~L~lv~l~~~sll~~sv~gl~~~l~~llfg~~vG~~vD----r~~R~~-v~~~~~~~q~~~v~~s~~~~~~~l~~~~~ 113 (493)
-.+.|..+...=+...++..-++..+.-.+..|.+|.++| |+.||| -+...- +..+++.. ++..+...
T Consensus 23 ~~~~f~~~~~gl~~~~~g~i~~~~~i~dai~dp~~G~~sDr~~tr~Grrrp~~l~g~----i~~~~~~~---llf~~~p~ 95 (428)
T PF13347_consen 23 YLLYFYTDVLGLSPALAGLILLVGRIWDAITDPLIGYLSDRTRTRWGRRRPWILIGA----ILLALSFF---LLFSPPPA 95 (428)
T ss_pred HHHHHHHHHcCCCHHHHHHHHHHHHHhhhhcCCcEEEEEeeecccccccceEeehhh----HHHHHHHH---Hhhccccc
Confidence 3344455666666777777777888888899999999999 565444 444443 12122222 22211011
Q ss_pred ccc---hhHHHHHHHHHHHHHHHHHHhhhhhhhhhhccceEEEecCCCChhhhhhhhhHHHhHHHHHHhhhhHHHHHHHH
Q 011118 114 KST---NFIAFVLLVILTNISGAVGVISTLAGTILIEREWVVVISEGHPPEALTKMNSIIRRIDLTCKLLAPAITGFIIS 190 (493)
Q Consensus 114 ~~~---~~~~~~~l~~~~~~~g~~~~l~~~a~~iaieRDWvv~i~~~~~~~~L~~~Na~mrriDl~~~l~gP~~~G~l~~ 190 (493)
+.. ...++.+.+ .+....-.+..+. .+-+.+.+++++ ++.+++++.-+-......++...+.+.+.+
T Consensus 96 ~~~~~~~~~~~~~~~---~l~~~~~t~~~i~-----~~al~~~lt~~~--~~R~~l~~~~~~~~~~g~~l~~~~~~~l~~ 165 (428)
T PF13347_consen 96 GLSFTAKLVWLFVFY---ILFDIAYTFVQIP-----YNALIPELTPDP--DERTRLSSWRMIFSMIGSLLASFLAPILVS 165 (428)
T ss_pred hhhhhhHHHHHHHHH---HHHHHhhhhccCc-----hhhcCccccccH--hhhhhHHHHHHHHHHHHHHHHHHHhhhhhh
Confidence 111 111211111 1223333333333 233477777653 567788887777777777777777777776
Q ss_pred hhh-------hHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCcchhhhhhhhccCCCcccccccCCccccccccccccchh
Q 011118 191 FVS-------LQASAMTLAIWTTVTVWVEYWLFMSVYKGIPALAESSQRRIRRSMPIDMEQSTSMPRERESLLSHDENNA 263 (493)
Q Consensus 191 ~~s-------~~~a~~~i~~~n~~S~~ve~~~l~~Vy~~~p~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 263 (493)
..+ +.....+.++.-.+++++.+. .++| . ++ + + ++. .
T Consensus 166 ~~g~~~~~~~~~~~~~v~~iv~~v~~~i~~~-------~~ke-~----~~-----~-~-~~~-----------------~ 209 (428)
T PF13347_consen 166 WFGGGDTSNGYRWMALVLAIVGLVFFLITFF-------FVKE-R----SV-----E-V-TEQ-----------------E 209 (428)
T ss_pred hhccCccchHHHHHHHHHHHHHHHHhhhhhh-------eeee-c----cc-----c-c-ccc-----------------c
Confidence 554 333343333433333333222 2222 0 00 0 0 000 0
Q ss_pred HHHHHHHHHHHHhhhccccccccceeeecccchHHHHHHHHHHHHhh-hhhhHHHHHHHH-cCCCchHHHHHHHHHHHHH
Q 011118 264 ELAEKRWRWKIIDWISNAPCVGAWQVYLKQEVVLPGVSLALLFFTVL-SFGTLMTATLEW-EGIPAYIIGIARGISATIG 341 (493)
Q Consensus 264 ~~~~~~~~~~~~~~l~~~~~~~g~~~y~~q~v~la~~alalLy~tVL-~f~~l~~~yl~~-~gls~~~iG~~r~~~av~G 341 (493)
+ +...++.++..++||.++..+...+++.... ...+.+.-|.++ .|.+ ...+.+..+..+.+
T Consensus 210 ---~------------~~~~~~~~~~~~~nr~~~~l~~~~~~~~~~~~~~~~~~~y~~~~vl~~~-~~~~~~~~~~~~~~ 273 (428)
T PF13347_consen 210 ---K------------KISLRDSLRSLFRNRPFRILLLAFFLQWLAFALMNTFLPYYFTYVLGNE-GLISIFMLIFFVAS 273 (428)
T ss_pred ---c------------ccccccchhhhcccchHHHHHHHHHHHHhhhhhhhhHHHHHHHHHhcCc-hhhHHHHHHHHHHH
Confidence 0 0014677888899999888877777764432 234445556664 6655 67899999999999
Q ss_pred HHHHHHHHHHHhhhchhhhhHHHHHHHHHHHHHHHHHHhhcchHHHHHHHHHHHHhhhchhhhhhhhhhhhhhccCCCCc
Q 011118 342 IAATILYPILQSRISTLRTGLWSIWSQWFCLLICVASIWIHNSLVAAYMLMVGVATSRLGLWMFDLSVIQQMQDLVPESD 421 (493)
Q Consensus 342 llgT~~~~~l~~riGl~r~g~~~~~~q~~~L~~~v~~~~~~~~~~s~~~l~~gi~~SR~GLw~fDl~~~~l~Qe~vp~~~ 421 (493)
+++..+.+++.||+|-.|+...+.... ....+...+.+. .+...+....++..+|.-.+......++-|.+|++|
T Consensus 274 ~v~~~~~~~l~~r~gk~~~~~~~~~~~---~~~~~~~~~~~~--~~~~~~~i~~~l~gi~~~~~~~~~~a~~ad~id~~e 348 (428)
T PF13347_consen 274 IVGSPLWGRLSKRFGKKKVYIIGLLLA---ALGFLLLFFLGP--GSPWLVLILFILAGIGYGAFFVIPWAMLADVIDYDE 348 (428)
T ss_pred HHHHHHHHHHHHHccceeehhhhHHHH---HHHHHHHHHHHh--hhHHHHHHHHHHhHhhhcccccccccccccchhhHH
Confidence 999999999999999999877766532 222222233331 233444445555556666667777888888877543
Q ss_pred -------chhHHHHHHHHHHhh-HHHHHHHHHh
Q 011118 422 -------RCVVGGVQNSLQSTM-DLMAYTMGII 446 (493)
Q Consensus 422 -------rG~v~gv~~sl~~~f-~l~~~~~~ii 446 (493)
-|.++|++...+... -+...+.+.+
T Consensus 349 ~~tg~r~~g~~~s~~~~~~k~~~~la~~i~g~~ 381 (428)
T PF13347_consen 349 WKTGRRREGMYFSVNSFFIKIGQGLAGAIVGLL 381 (428)
T ss_pred HhcCCCchHHHHHhhhhhhHHHHHHHHHHHHHH
Confidence 466666666665555 4444444433
No 69
>PRK10133 L-fucose transporter; Provisional
Probab=99.18 E-value=2.7e-07 Score=98.45 Aligned_cols=357 Identities=10% Similarity=-0.006 Sum_probs=198.1
Q ss_pred hhHHHHHHHHHHHHHhhHHHHHHHHHHHHHhCCCchHHHHHHHHHHHHHHHhhhccceeeecccchhHHHHHHHHHHHHH
Q 011118 17 FLTTYLYVAHFLARWGARMWEFSVGLYMISVWPDSLLFAAIYGAVESASIALFGPIVGHWVDKLTYVKVLQIWLVTQNLS 96 (493)
Q Consensus 17 ~~~~~L~~s~~lS~~Gdr~~~Fa~~L~lv~l~~~sll~~sv~gl~~~l~~llfg~~vG~~vDr~~R~~v~~~~~~~q~~~ 96 (493)
..+..+..-.++--+.+.+-...+|.+ .+-++-|....+.....-.+...+.+++.|.++||++|||++..+.+.-.+.
T Consensus 26 ~~~~~~~~~~~~~~~~~~~~~~~~p~i-~~~~~~s~~~~gl~~~~~~~g~~i~~~~~g~l~dr~G~r~~l~~g~~~~~~~ 104 (438)
T PRK10133 26 IPFALLCSLFFLWAVANNLNDILLPQF-QQAFTLTNFQAGLIQSAFYFGYFIIPIPAGILMKKLSYKAGIITGLFLYALG 104 (438)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcHHHHHHHHHHHHHH
Confidence 344556666666677777888889986 6677778899999999999999999999999999999999998886443333
Q ss_pred HHHHHHHHHHHHhhcccccchhHHHHHHHHHHHHHHHHHHhhhhhhhhhhccceEEEecCCCChhhhhhhhhHHHhHHHH
Q 011118 97 FIVAGVSVITLLFFSSLKSTNFIAFVLLVILTNISGAVGVISTLAGTILIEREWVVVISEGHPPEALTKMNSIIRRIDLT 176 (493)
Q Consensus 97 v~~s~~~~~~~l~~~~~~~~~~~~~~~l~~~~~~~g~~~~l~~~a~~iaieRDWvv~i~~~~~~~~L~~~Na~mrriDl~ 176 (493)
+.++.. .. ...++..+... -.+.|+......++.+..+ +|+- ++ ++-....+.+...-.+
T Consensus 105 ----~~l~~~-~~----~a~~~~~ll~~---r~l~G~g~g~~~~~~~~~v-~~~~----~~---~~~~~~~s~~~~~~~~ 164 (438)
T PRK10133 105 ----AALFWP-AA----EIMNYTLFLVG---LFIIAAGLGCLETAANPFV-TVLG----PE---SSGHFRLNLAQTFNSF 164 (438)
T ss_pred ----HHHHHH-HH----hcCCHHHHHHH---HHHHHHHHHHHHhhHHHHH-HHhC----Ch---hhHHHHHHHHHHHHHH
Confidence 211110 01 11222222211 1233444445554544443 2442 22 1222234556666678
Q ss_pred HHhhhhHHHHHHHHhh------------------hhHHHHHHHHHHHH----HHHHHHHHHHHHHHhhcCcchhhhhhhh
Q 011118 177 CKLLAPAITGFIISFV------------------SLQASAMTLAIWTT----VTVWVEYWLFMSVYKGIPALAESSQRRI 234 (493)
Q Consensus 177 ~~l~gP~~~G~l~~~~------------------s~~~a~~~i~~~n~----~S~~ve~~~l~~Vy~~~p~L~~~~~~~~ 234 (493)
.-.+||++++.+.... +.+... ...|-. +..+.-...+...+.+.|+..++ +
T Consensus 165 G~~~g~~~g~~l~~~~~~~~~~~~~~~l~~~~~~~w~~~~--~~~w~~~f~~~~~v~~~~~~~~~~~~~p~~~~~--~-- 238 (438)
T PRK10133 165 GAIIAVVFGQSLILSNVPHQSQDVLDKMTPEQLSAYKHSL--VLSVQTPYMIIVAIVLLVALLIMLTKFPALQSD--N-- 238 (438)
T ss_pred HHHHHHHHHHHHHhcCCcccchhhhhccChhhHHHHHHHH--HHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCcc--c--
Confidence 8888888887665211 110000 000000 00011111111223345542100 0
Q ss_pred ccCCCcccccccCCccccccccccccchhHHHHHHHHHHHHhhhccccccccceeeecccchHHHHHHHHHHHHh-hhhh
Q 011118 235 RRSMPIDMEQSTSMPRERESLLSHDENNAELAEKRWRWKIIDWISNAPCVGAWQVYLKQEVVLPGVSLALLFFTV-LSFG 313 (493)
Q Consensus 235 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~y~~q~v~la~~alalLy~tV-L~f~ 313 (493)
+. ++ +..+ ..+.++..+++|.++..+...++|... .+..
T Consensus 239 ----~~--~~----------------~~~~------------------~~~~~~~ll~~~~~~~~~l~~~~~~~~~~~~~ 278 (438)
T PRK10133 239 ----HS--DA----------------KQGS------------------FSASLSRLARIRHWRWAVLAQFCYVGAQTACW 278 (438)
T ss_pred ----cc--cc----------------cccc------------------hhhhHHHHHhCchHHHHHHHHHHHHHHHHHHH
Confidence 00 00 0000 011122335677666555444555332 2233
Q ss_pred hHHHHHHH--HcCCCchHHHHHHHHHHHHHHHHHHHHHHHHhhhchhhhhHHHHHHHHHHHHHHHHHHhhcchHHHHHHH
Q 011118 314 TLMTATLE--WEGIPAYIIGIARGISATIGIAATILYPILQSRISTLRTGLWSIWSQWFCLLICVASIWIHNSLVAAYML 391 (493)
Q Consensus 314 ~l~~~yl~--~~gls~~~iG~~r~~~av~GllgT~~~~~l~~riGl~r~g~~~~~~q~~~L~~~v~~~~~~~~~~s~~~l 391 (493)
+....|+. ..|+++...|.......+++++|.+..+++.+|+|..|...++... .........+.++. ...
T Consensus 279 ~~~~~~l~~~~~g~s~~~ag~~~~~~~~~~~vG~~~~g~l~~r~g~~~~l~~~~~~---~~~~~~~~~~~~~~-~~~--- 351 (438)
T PRK10133 279 SYLIRYAVEEIPGMTAGFAANYLTGTMVCFFIGRFTGTWLISRFAPHKVLAAYALI---AMALCLISAFAGGH-VGL--- 351 (438)
T ss_pred HHHHHHHhhhcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCHHHHHHHHHHH---HHHHHHHHHHcCCh-HHH---
Confidence 34566764 3799999999999999999999999999999999988776655431 11111222223322 221
Q ss_pred HHHHHhhhchhhhhhhhhhhhhhccCCCCcchhHHHHHHHHHHh-hHHHHHHHHHhccCC
Q 011118 392 MVGVATSRLGLWMFDLSVIQQMQDLVPESDRCVVGGVQNSLQST-MDLMAYTMGIIISNP 450 (493)
Q Consensus 392 ~~gi~~SR~GLw~fDl~~~~l~Qe~vp~~~rG~v~gv~~sl~~~-f~l~~~~~~ii~~~p 450 (493)
.+..+..+|.-..=.+....-++..|++ .|..+++... +.. .-++..+.+.+...-
T Consensus 352 -~~~~l~glg~~~i~P~~~s~a~~~~~~~-~~~as~l~~~-~~~g~~~~~~i~G~l~~~~ 408 (438)
T PRK10133 352 -IALTLCSAFMSIQYPTIFSLGIKNLGQD-TKYGSSFIVM-TIIGGGIVTPVMGFVSDAA 408 (438)
T ss_pred -HHHHHHHHHHHHHHHHHHHHHHcccchh-hccchhHHhH-HhccchHHHHHHHHHHHhc
Confidence 2233444555555677777778877764 5666766653 333 367777778776544
No 70
>COG2814 AraJ Arabinose efflux permease [Carbohydrate transport and metabolism]
Probab=99.18 E-value=2e-07 Score=97.73 Aligned_cols=357 Identities=16% Similarity=0.144 Sum_probs=210.5
Q ss_pred HHHHHHHHHHHhhHHHHHHHHHHHHHh---CCCchHHHHHHHHHHHHHHHhhhccceeeecccchhHHHHHHHHHHHHHH
Q 011118 21 YLYVAHFLARWGARMWEFSVGLYMISV---WPDSLLFAAIYGAVESASIALFGPIVGHWVDKLTYVKVLQIWLVTQNLSF 97 (493)
Q Consensus 21 ~L~~s~~lS~~Gdr~~~Fa~~L~lv~l---~~~sll~~sv~gl~~~l~~llfg~~vG~~vDr~~R~~v~~~~~~~q~~~v 97 (493)
.--..-.++.++-.+.||...=.+-.+ +.=|.-..+..-..-.+...+.+|+...+.||++|||++......=.++
T Consensus 13 ~~l~aLa~~~F~igttEfv~~gLLp~iA~dl~vs~~~aG~lis~yAl~~ai~ap~l~~lt~r~~Rr~lLl~~l~lFi~~- 91 (394)
T COG2814 13 LALLALALAAFAIGTTEFVPVGLLPPIAADLGVSEGAAGQLITAYALGVALGAPLLALLTGRLERRRLLLGLLALFIVS- 91 (394)
T ss_pred HHHHHHHHHHHHHHhHHHHHHhchHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHcccchHHHHHHHHHHHHHH-
Confidence 334556778888889999865544444 2224444444444444566677888899999999999987775322222
Q ss_pred HHHHHHHHHHHhhcccccchhHHHHHHHHHHHHHH-HHHHhhhhhhhhhhccceEEEecCCCChhhhhhhhhHHHhHHHH
Q 011118 98 IVAGVSVITLLFFSSLKSTNFIAFVLLVILTNISG-AVGVISTLAGTILIEREWVVVISEGHPPEALTKMNSIIRRIDLT 176 (493)
Q Consensus 98 ~~s~~~~~~~l~~~~~~~~~~~~~~~l~~~~~~~g-~~~~l~~~a~~iaieRDWvv~i~~~~~~~~L~~~Na~mrriDl~ 176 (493)
..+ ..+.+ ++..+.+-= .+.| +.+.+.+++..++ ..++.+ ++-.++=+.|-.=-..
T Consensus 92 ---n~l--~alAp------~f~~Ll~aR---~~~g~a~G~f~~i~~~~a------~~lvpp---~~~~~Aiaiv~~G~tl 148 (394)
T COG2814 92 ---NLL--SALAP------SFAVLLLAR---ALAGLAHGVFWSIAAALA------ARLVPP---GKRGRALALVFTGLTL 148 (394)
T ss_pred ---HHH--HHHhc------cHHHHHHHH---HHHHHHHHHHHHHHHHHH------HHHcCc---cchhhHHHHHHHHHHH
Confidence 221 11111 222211111 1112 2335555554444 334444 3455666666666689
Q ss_pred HHhhhhHHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCcchhhhhhhhccCCCcccccccCCcccccccc
Q 011118 177 CKLLAPAITGFIISFVSLQASAMTLAIWTTVTVWVEYWLFMSVYKGIPALAESSQRRIRRSMPIDMEQSTSMPRERESLL 256 (493)
Q Consensus 177 ~~l~gP~~~G~l~~~~s~~~a~~~i~~~n~~S~~ve~~~l~~Vy~~~p~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 256 (493)
+.++|.-++.++-+.+|.+.+...+.+...+.++.. ++..| +++. + +..+
T Consensus 149 A~v~GvPLGt~ig~~~GWR~~F~~ia~l~ll~~~~~-------~~~lP-~~~~---------~-~~~~------------ 198 (394)
T COG2814 149 ATVLGVPLGTFLGQLFGWRATFLAIAVLALLALLLL-------WKLLP-PSEI---------S-GSLP------------ 198 (394)
T ss_pred HHHHhccHHHHHHHHhhHHHHHHHHHHHHHHHHHHH-------HHhCC-CccC---------C-CCCC------------
Confidence 999999999999999999999988888888777543 34567 1100 0 0000
Q ss_pred ccccchhHHHHHHHHHHHHhhhccccccccceeeecccchHHHHHHHHHHHH-h-hhhhhHHHHHHHH-cCCCchHHHHH
Q 011118 257 SHDENNAELAEKRWRWKIIDWISNAPCVGAWQVYLKQEVVLPGVSLALLFFT-V-LSFGTLMTATLEW-EGIPAYIIGIA 333 (493)
Q Consensus 257 ~~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~y~~q~v~la~~alalLy~t-V-L~f~~l~~~yl~~-~gls~~~iG~~ 333 (493)
.+. ++ + ...+|+|-.+..+...++.++ . -.|..+-+ |+.+ .|++++.+++.
T Consensus 199 -----~~~-------~~---~----------~~~l~~p~v~~~l~~t~l~~~g~F~~ftYi~P-~L~~v~g~s~~~vs~~ 252 (394)
T COG2814 199 -----GPL-------RT---L----------LRLLRRPGVLLGLLATFLFMTGHFALYTYIRP-FLESVAGFSVSAVSLV 252 (394)
T ss_pred -----cch-------hH---H----------HHHhcCchHHHHHHHHHHHHcchhhhHHhHHH-HHHHccCCCHhHHHHH
Confidence 000 00 0 112577777777777766643 1 12333333 4443 79999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHhhhchhhhhHHHHHHHHHHHHHHHHHHhhcchHHHHHHHHHHHHhhhchhhhhh-hhhhhh
Q 011118 334 RGISATIGIAATILYPILQSRISTLRTGLWSIWSQWFCLLICVASIWIHNSLVAAYMLMVGVATSRLGLWMFD-LSVIQQ 412 (493)
Q Consensus 334 r~~~av~GllgT~~~~~l~~riGl~r~g~~~~~~q~~~L~~~v~~~~~~~~~~s~~~l~~gi~~SR~GLw~fD-l~~~~l 412 (493)
.-+-.++|+.|+++.+++.+| +..|+.......+...+.. +.++...+.... ....+ |+|- ....|.
T Consensus 253 Ll~~Gv~~~~Gn~~gGrl~dr-~~~~~l~~~~~l~a~~~l~--l~~~~~~~~~~~----~~~~~-----wg~a~~~~~~~ 320 (394)
T COG2814 253 LLAFGIAGFIGNLLGGRLADR-GPRRALIAALLLLALALLA--LTFTGASPALAL----ALLFL-----WGFAFSPALQG 320 (394)
T ss_pred HHHHHHHHHHHHHHHhhhccc-cchhHHHHHHHHHHHHHHH--HHHhcchHHHHH----HHHHH-----HHHHhhhhhhH
Confidence 999999999999999999999 8888776554432222211 222222221111 11221 4333 233444
Q ss_pred hhccCCC---CcchhHHHHHHHHHHhh-HHHHHHHHHhccCCCCchHHHHHHHHHHHHHHHH
Q 011118 413 MQDLVPE---SDRCVVGGVQNSLQSTM-DLMAYTMGIIISNPQDFWKLILISVIVVTLAAIL 470 (493)
Q Consensus 413 ~Qe~vp~---~~rG~v~gv~~sl~~~f-~l~~~~~~ii~~~p~~F~~l~~~S~~~V~~~~~l 470 (493)
.|..+-+ +.++.+.+...+.-|+- -+++.+.|++... .-.......+...+..+..+
T Consensus 321 ~~~~~a~~~p~~~~~a~sl~~aa~nlgia~GA~lGG~v~~~-~g~~~~~~~~a~l~~~a~~~ 381 (394)
T COG2814 321 LQTRLARLAPDAADLAGSLNVAAFNLGIALGAALGGLVLDA-LGYAATGWVGAALLLLALLL 381 (394)
T ss_pred HHHHhcccCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHh-hchHHHHHHHHHHHHHHHHH
Confidence 4444433 78999999888888877 9999999999988 44444444444444444433
No 71
>TIGR00903 2A0129 major facilitator 4 family protein. This family of proteins are uncharacterized proteins from archaea. This family includes proteins from Archaeoglobus fulgidus and Aeropyrum pernix.
Probab=99.17 E-value=4.6e-08 Score=102.10 Aligned_cols=350 Identities=13% Similarity=0.010 Sum_probs=189.5
Q ss_pred HHHHhhHHHHHHHHHHHHHhCCCchHHHHHHHHHHHHHHHhhhccceeeecccchhHHHHHHHHHHHHHHHHHHHHHHHH
Q 011118 28 LARWGARMWEFSVGLYMISVWPDSLLFAAIYGAVESASIALFGPIVGHWVDKLTYVKVLQIWLVTQNLSFIVAGVSVITL 107 (493)
Q Consensus 28 lS~~Gdr~~~Fa~~L~lv~l~~~sll~~sv~gl~~~l~~llfg~~vG~~vDr~~R~~v~~~~~~~q~~~v~~s~~~~~~~ 107 (493)
.|+.+--.+.+..|.+..+. +-|....+.....-.+...+..++.|.+.||++||+++..+.. ..+.+. ...
T Consensus 2 ~~~~~~~~~~~~lp~i~~~~-~~s~~~~g~~~s~~~~g~~i~~~~~G~l~Dr~grr~~~~~~~~-----~~~~~~--~~~ 73 (368)
T TIGR00903 2 ASQAIWVTFSPVLSLVAEDI-DVSKEELGLLAITYPAAFLALTIPSGLLLDRAFKRWFLFGSLA-----TFAAAA--GRL 73 (368)
T ss_pred hhhHHHHHHHhhHHHHHHHh-CcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHccchHHHHHHHH-----HHHHHH--HHH
Confidence 45666667788888866554 4477788888888888889999999999999999987654421 111111 111
Q ss_pred HhhcccccchhHHHHHHHHHHHHHHHHHHhhhhhhhhhhccceEEEecCCCChhhhhhhhhHHHhHHHHHHhhhhHHHHH
Q 011118 108 LFFSSLKSTNFIAFVLLVILTNISGAVGVISTLAGTILIEREWVVVISEGHPPEALTKMNSIIRRIDLTCKLLAPAITGF 187 (493)
Q Consensus 108 l~~~~~~~~~~~~~~~l~~~~~~~g~~~~l~~~a~~iaieRDWvv~i~~~~~~~~L~~~Na~mrriDl~~~l~gP~~~G~ 187 (493)
.. ..++..+...- .+.|..+....++... + .||.| + ++..++++.+..--....+++|.+++.
T Consensus 74 ~~-----~~~~~~l~~~R---~l~G~g~~~~~~~~~~-~-~~~~~----~---~~r~~a~~~~~~~~~lG~~l~~~~~~~ 136 (368)
T TIGR00903 74 LD-----PFNYEWLLACQ---LLAALGQPFLLNAFAP-A-ASQIR----E---ERRDLVISLLSFAMYLGIIFALAAGLK 136 (368)
T ss_pred HH-----hccHHHHHHHH---HHHHhHhHHHHHHHHH-H-HHHcC----H---HHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 11 01222222222 1223333322222222 2 46652 2 567889999999999999999999999
Q ss_pred HHHhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCcchhhhhhhhccCCCcccccccCCccccccccccccchhHHHH
Q 011118 188 IISFVSLQASAMTLAIWTTVTVWVEYWLFMSVYKGIPALAESSQRRIRRSMPIDMEQSTSMPRERESLLSHDENNAELAE 267 (493)
Q Consensus 188 l~~~~s~~~a~~~i~~~n~~S~~ve~~~l~~Vy~~~p~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 267 (493)
+....|.+....+.++..++..++ ++...||.+++ + ++. .+..+ .
T Consensus 137 l~~~~gWr~~f~~~~~l~~~~~~~-------~~~~lp~~p~~---~---------~~~---------------~~~~~-~ 181 (368)
T TIGR00903 137 IYTAGGLQLLIIPIAAVAAAGIIL-------VLAALPALPFQ---A---------AEG---------------FGFKD-A 181 (368)
T ss_pred HHHccchHHHHHHHHHHHHHHHHH-------HHHHcCCCCCC---C---------CCC---------------cchHH-H
Confidence 998888887765545554444322 12234542210 0 000 00000 0
Q ss_pred HHHHHHHHhhhccccccccceeeecccchHHHHHHHHHHH-HhhhhhhHHHHHHHHcCCCchHHHHHHHHHHHHHHHHHH
Q 011118 268 KRWRWKIIDWISNAPCVGAWQVYLKQEVVLPGVSLALLFF-TVLSFGTLMTATLEWEGIPAYIIGIARGISATIGIAATI 346 (493)
Q Consensus 268 ~~~~~~~~~~l~~~~~~~g~~~y~~q~v~la~~alalLy~-tVL~f~~l~~~yl~~~gls~~~iG~~r~~~av~GllgT~ 346 (493)
.+.|+..++||.++........+. ...++.+-+..|+++.|++.. .|..-.+..+.|..|.
T Consensus 182 ----------------~~~~~~ll~~~~~~~~~~~~~~~~~~~~~~~~wlp~~L~~~g~s~~-~~~~~~l~~~~g~~g~- 243 (368)
T TIGR00903 182 ----------------VKEFGALAGRKDLWIIGAILGFGVALFDNLAIWLEAALRPAGLEDI-AGDAVALAILAGLIGV- 243 (368)
T ss_pred ----------------HHHHHHHHcChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCChH-HHHHHHHHHHHHHHHH-
Confidence 011233456665544443333332 223566778899988888864 5666555555555443
Q ss_pred HHHHHHhhhc---hhhhhHHHHHHHHHHHHHHH---HHHhhcchHHHHHHHHHHHHhhhchhhhhhhhhhhhhhccCCCC
Q 011118 347 LYPILQSRIS---TLRTGLWSIWSQWFCLLICV---ASIWIHNSLVAAYMLMVGVATSRLGLWMFDLSVIQQMQDLVPES 420 (493)
Q Consensus 347 ~~~~l~~riG---l~r~g~~~~~~q~~~L~~~v---~~~~~~~~~~s~~~l~~gi~~SR~GLw~fDl~~~~l~Qe~vp~~ 420 (493)
+++..|.. ..+.... . .++..++ ...+...+..... ...++.++.-..-.....+.||..|++
T Consensus 244 --~~~~d~~~r~~~r~~~~~-~----~~~~~a~~~~~~~~~~~~~~~~~----~~~l~~~~~~~~~~~~~~~~~~~~p~~ 312 (368)
T TIGR00903 244 --AVIPDRVARAGLRSIYIR-A----AALLIAAFFLALAFELNRLALFA----FIGIAGLLMLPAYAIIMDWIGKFCDKE 312 (368)
T ss_pred --HHhhHHhhhhhhHHHHHH-H----HHHHHHHHHHHHHHccccHHHHH----HHHHHHHhhhhhHHHHHHHHHHhcchh
Confidence 45554443 2111111 0 0111111 1111222222211 112222222222223567899999999
Q ss_pred cchhHHHHHHHHHHhh-HHHHHHHHHhccCCCCchHHHHHHHHHHHHHH
Q 011118 421 DRCVVGGVQNSLQSTM-DLMAYTMGIIISNPQDFWKLILISVIVVTLAA 468 (493)
Q Consensus 421 ~rG~v~gv~~sl~~~f-~l~~~~~~ii~~~p~~F~~l~~~S~~~V~~~~ 468 (493)
.||+..|+.++..++. -.+.++.+.+.. +..+...+.+...+..+.
T Consensus 313 ~rgt~~G~~~~~g~~~~~~~~~~~~~~~~--~~~~~f~~~~~~~~i~~~ 359 (368)
T TIGR00903 313 LHGKAAGAIGFTSRAISVALALAAMLFIS--SAEAYFTFLAILITIAFA 359 (368)
T ss_pred hcCcccchhhHHHHHHHHHHHHHHHHHhc--CHHHHHHHHHHHHHHHHH
Confidence 9999999999999988 466676665553 333444444444444333
No 72
>TIGR00894 2A0114euk Na(+)-dependent inorganic phosphate cotransporter.
Probab=99.17 E-value=7.1e-09 Score=110.60 Aligned_cols=362 Identities=13% Similarity=0.045 Sum_probs=187.3
Q ss_pred CchHHHHHHHHHHHHHHHhhhccceeeecccchhHHHHHHHHHHHHHHHHHHHHHHHHHhhcccccchhHHHHHHHHHHH
Q 011118 50 DSLLFAAIYGAVESASIALFGPIVGHWVDKLTYVKVLQIWLVTQNLSFIVAGVSVITLLFFSSLKSTNFIAFVLLVILTN 129 (493)
Q Consensus 50 ~sll~~sv~gl~~~l~~llfg~~vG~~vDr~~R~~v~~~~~~~q~~~v~~s~~~~~~~l~~~~~~~~~~~~~~~l~~~~~ 129 (493)
-+....|.....-.+..++.+++.|.+.||++||+++..+.+.-.+. +.+ ..... . .+. ..+++.-.
T Consensus 73 ~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~g~r~~l~~~~~~~~~~----~~~-~~~~~----~-~~~---~~l~~~r~ 139 (465)
T TIGR00894 73 WSGALQGLILSSHFYGQIIIQIPVGYLAGKYVFKWSIGIGMFLSSVI----SIV-IPWAA----G-GGI---ALVVFCRV 139 (465)
T ss_pred CCHHHhhHHHHHHHHHHHHHHcchHHHHHHhCcchhhHHHHHHHHHH----HHH-HHHHH----H-cCc---hHHHHHHH
Confidence 35566777777788899999999999999999999887776332222 111 00010 0 111 11222223
Q ss_pred HHHHHHHhhhhhhhhhhccceEEEecCCCChhhhhhhhhHHHhHHHHHHhhhhHHHHHHHHhh-hhHHHHHHHHHHHHHH
Q 011118 130 ISGAVGVISTLAGTILIEREWVVVISEGHPPEALTKMNSIIRRIDLTCKLLAPAITGFIISFV-SLQASAMTLAIWTTVT 208 (493)
Q Consensus 130 ~~g~~~~l~~~a~~iaieRDWvv~i~~~~~~~~L~~~Na~mrriDl~~~l~gP~~~G~l~~~~-s~~~a~~~i~~~n~~S 208 (493)
+.|..+....++.. ..-.||. ++ ++..+.++.....-.+..+++|.++|.+.... |.+....+.+++..+.
T Consensus 140 ~~G~~~~~~~~~~~-~~~~~~~----~~---~~r~~~~~~~~~~~~~g~~i~~~l~~~l~~~~~gw~~~f~i~~~~~~~~ 211 (465)
T TIGR00894 140 IQGLAQGSVSPATH-KIIVKWA----PP---KERSRLLGMSTSGFQLGTFIFLPISGWLCESWGGWPMIFYVFGIVGCAW 211 (465)
T ss_pred HHHHhcccchhhHH-HHHHhcC----CH---HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCCeehhhhhHHHHHH
Confidence 34555555554433 3334564 32 56889999999989999999999999998873 7665544333333222
Q ss_pred HHHHHHHHHHHHhhcCcchhhhhhhhccCCCcccccccCCccccccccccccchhHHHHHHHHHHHHhhhccccccccce
Q 011118 209 VWVEYWLFMSVYKGIPALAESSQRRIRRSMPIDMEQSTSMPRERESLLSHDENNAELAEKRWRWKIIDWISNAPCVGAWQ 288 (493)
Q Consensus 209 ~~ve~~~l~~Vy~~~p~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~ 288 (493)
.+ +....++..|+-.++ .+ +.++ +...+...++-.+..-...|+
T Consensus 212 ~~----~~~~~~~~~p~~~~~--~~-------~~~~-----------------------~~i~~~~~~~~~~~~~~~~~~ 255 (465)
T TIGR00894 212 SL----LWFVFPADDPSIHPC--IS-------KFEK-----------------------KYINSSLQGQKGSTRQSLPIK 255 (465)
T ss_pred HH----HHHHHhcCCcccCCC--CC-------HHHH-----------------------HHHHhhcccccCCCCCCCCHH
Confidence 21 111111122221100 00 0000 000000000000000022466
Q ss_pred eeecccchHHHHHHHHHH-HHhhhhhhHHHHHHHH-cCCCchHHHHHHHHHHHHHHHHHHHHHHHHhhhchhhhhH---H
Q 011118 289 VYLKQEVVLPGVSLALLF-FTVLSFGTLMTATLEW-EGIPAYIIGIARGISATIGIAATILYPILQSRISTLRTGL---W 363 (493)
Q Consensus 289 ~y~~q~v~la~~alalLy-~tVL~f~~l~~~yl~~-~gls~~~iG~~r~~~av~GllgT~~~~~l~~riGl~r~g~---~ 363 (493)
..+++|.++......+.+ +....+...++.|+.+ .|++....|++.++..++++.+..+.+++.+|++..|... .
T Consensus 256 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~lp~~l~~~~g~s~~~~g~~~~~~~~~~~i~~~~~g~l~d~~~~~~~~~~~~~ 335 (465)
T TIGR00894 256 AIPKSLPVWAIWFAIFGHFWLYTILPTYLPTFISWVLRVSGKENGLLSSLPYLFAWLCSIFAGYLADFLKSSKTLSLTAA 335 (465)
T ss_pred HHhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcChHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCcHHHH
Confidence 667777665554444333 2333455677889885 7999999999999999999999999999988875321110 0
Q ss_pred HHHHHHH-HHHHHHHHH---h-hcchHHHHHHHHHHHHhhhchhhhhhhhhhhhhhccCCCCcchhHHHHHHHHHHhh-H
Q 011118 364 SIWSQWF-CLLICVASI---W-IHNSLVAAYMLMVGVATSRLGLWMFDLSVIQQMQDLVPESDRCVVGGVQNSLQSTM-D 437 (493)
Q Consensus 364 ~~~~q~~-~L~~~v~~~---~-~~~~~~s~~~l~~gi~~SR~GLw~fDl~~~~l~Qe~vp~~~rG~v~gv~~sl~~~f-~ 437 (493)
......+ ++.+++... . .......+..+..+.... +.. -.......|+..|+ .+|.++|+.+..+++. -
T Consensus 336 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~--~~~--~~~~~~~~~~~~~~-~~g~~~g~~~~~~~l~~~ 410 (465)
T TIGR00894 336 RKIFNGIGGLGPGIFAYALPYLSAAFYLTIIILTLANAVS--SGP--LAGVLINSLDLAPR-FLGFIKGITGLPGFIGGL 410 (465)
T ss_pred HHHHHHHHHHHHHHHHHHHHHcCCchHHHHHHHHHHHHHh--hhh--hhhhhhchhhcChh-HHHHHHHHHHHHHHHHHH
Confidence 0011111 111111111 1 111122222222222211 111 12222344555565 8999999999888877 4
Q ss_pred HHHHHHHHhccCC--CCchHHHHHHHHHHHHHHHHHHH
Q 011118 438 LMAYTMGIIISNP--QDFWKLILISVIVVTLAAILYTF 473 (493)
Q Consensus 438 l~~~~~~ii~~~p--~~F~~l~~~S~~~V~~~~~l~~~ 473 (493)
+..++.+.+...- +.|.....+..+....+..++..
T Consensus 411 i~p~l~g~~~~~~~~~~~~~~f~~~~~~~~i~~i~~~~ 448 (465)
T TIGR00894 411 IASTLAGNILSQDSKNVWLIVFLIMAFVNILCVIFYLI 448 (465)
T ss_pred HHHHhhheeeCCCCchHHHHHHHHHHHHHHHHHHHeee
Confidence 4445555554432 33544444444444444444443
No 73
>PF03825 Nuc_H_symport: Nucleoside H+ symporter
Probab=99.13 E-value=4.4e-07 Score=96.02 Aligned_cols=190 Identities=16% Similarity=0.123 Sum_probs=124.9
Q ss_pred eecccchHHHHHHHHHHH-HhhhhhhHHHHHHHHcC-CCchHHHHHHHHHHHHHHHHHHHHHHHHhhhchhhhhHHHHHH
Q 011118 290 YLKQEVVLPGVSLALLFF-TVLSFGTLMTATLEWEG-IPAYIIGIARGISATIGIAATILYPILQSRISTLRTGLWSIWS 367 (493)
Q Consensus 290 y~~q~v~la~~alalLy~-tVL~f~~l~~~yl~~~g-ls~~~iG~~r~~~av~GllgT~~~~~l~~riGl~r~g~~~~~~ 367 (493)
.+|+|.++.-+..+++.. .--.+.+....|+++.| ++...+|...+++++.|+.-=+..+++.||+|..+...++...
T Consensus 203 llk~~~~~~Fll~~~l~~~~~~~~~~f~~~yl~~~gg~~~~~~g~~~~l~~~aEi~~f~~~~~~~~r~g~~~ll~~a~~~ 282 (400)
T PF03825_consen 203 LLKNPRFLVFLLAAFLIGISHAAYYTFFSIYLQELGGYSGSTIGILWALGVVAEIPFFFFSGRFLKRFGIKWLLLLALVA 282 (400)
T ss_pred HhcCccHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccchhhHHHHHHHHHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHH
Confidence 467787776666665553 22335667788999988 8999999999999999999999999999999988876655532
Q ss_pred HHHHHHHHHHHHhhcchHHHHHHHHHHHHhhhchhhhhhhhhhhhhhccCCCCcchhHHHHHHHHHHhh--HHHHHHHHH
Q 011118 368 QWFCLLICVASIWIHNSLVAAYMLMVGVATSRLGLWMFDLSVIQQMQDLVPESDRCVVGGVQNSLQSTM--DLMAYTMGI 445 (493)
Q Consensus 368 q~~~L~~~v~~~~~~~~~~s~~~l~~gi~~SR~GLw~fDl~~~~l~Qe~vp~~~rG~v~gv~~sl~~~f--~l~~~~~~i 445 (493)
.. +--.+.+...++.+....+.+.+..+-.+--=.|-.+..+++.+.+|++.|++.-|...++.++. -+++++.|.
T Consensus 283 ~~--vR~~l~a~~~~~~~~~~~~~~l~q~lhG~tf~~~~~a~~~yi~~~~p~~~~at~Q~l~~~~~~Glg~~iG~~igG~ 360 (400)
T PF03825_consen 283 YA--VRWLLYAYFSDPWPFIVALQLLGQLLHGLTFGLFHAASVRYIDRIAPPELRATAQGLYSALSFGLGGAIGSLIGGW 360 (400)
T ss_pred HH--HHHHHHHHhcCCcHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHhCCccchHHHHHHHHHHHhhHHHHHHHHHHHH
Confidence 11 11111222222222333333333333333223447889999999999999999999999999887 778999999
Q ss_pred hccCC---CCchHHHHHHHHHHHHHHHHHHHHHHHhhcC
Q 011118 446 IISNP---QDFWKLILISVIVVTLAAILYTFHLYRIRKH 481 (493)
Q Consensus 446 i~~~p---~~F~~l~~~S~~~V~~~~~l~~~~~~~~Rgh 481 (493)
+...- +.|.+..+..+.++.+.......+..-+++|
T Consensus 361 l~~~~g~~~~~~~~~~~~v~a~~~~~~~~~f~~~fk~~~ 399 (400)
T PF03825_consen 361 LYDAFGARGMFDWSAVFLVFAVMALVILVLFVILFKPKH 399 (400)
T ss_pred HHHHhcchhhhhHHHHHHHHHHHHHHHHHHHHhhccCCC
Confidence 88763 3455555555554443333333333323444
No 74
>PRK09952 shikimate transporter; Provisional
Probab=99.12 E-value=1.4e-06 Score=92.73 Aligned_cols=135 Identities=8% Similarity=0.044 Sum_probs=80.9
Q ss_pred hhhHHHHHHH-HcCCCchHHHHHHHHHHHHHHHHHHHHHHHHhhhchhhhhHHHHHHHHHHHHHHHHHHhhcchHHHHHH
Q 011118 312 FGTLMTATLE-WEGIPAYIIGIARGISATIGIAATILYPILQSRISTLRTGLWSIWSQWFCLLICVASIWIHNSLVAAYM 390 (493)
Q Consensus 312 f~~l~~~yl~-~~gls~~~iG~~r~~~av~GllgT~~~~~l~~riGl~r~g~~~~~~q~~~L~~~v~~~~~~~~~~s~~~ 390 (493)
+.+.+..|++ ..|+++...+.......+.++.++.+.+++.+|+|-.|...++.....++..+............ .
T Consensus 269 ~~~~~~~y~~~~~g~s~~~~~~~~~~~g~~~~i~~~~~g~l~Dr~grr~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~ 345 (438)
T PRK09952 269 VTAFALNYSTQNLGLPRELFLNIGLLVGGLSCLTIPCFAWLADRFGRRRVYITGALIGTLSAFPFFMALEAQSIFW---I 345 (438)
T ss_pred HHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCchHHHHHHHHHHHHHHHHHHHHHHcCChHH---H
Confidence 4455667887 48999887666666666778889999999999999877766554322111111111111111111 1
Q ss_pred HHHHHHhhhchhhhhhhhhhhhhhccCCCCcchhHHHHHHHHHH-hh-HHHHHHHHHhccC
Q 011118 391 LMVGVATSRLGLWMFDLSVIQQMQDLVPESDRCVVGGVQNSLQS-TM-DLMAYTMGIIISN 449 (493)
Q Consensus 391 l~~gi~~SR~GLw~fDl~~~~l~Qe~vp~~~rG~v~gv~~sl~~-~f-~l~~~~~~ii~~~ 449 (493)
++.+..+..++..........++.|..|.+.|+...|....+.+ +. -+..++.+.+...
T Consensus 346 ~~~~~~l~~~~~~~~~~~~~~~~~e~~p~~~r~tg~g~~~~~~~~lgg~~~p~i~g~l~~~ 406 (438)
T PRK09952 346 VFFSIMLANIAHDMVVCVQQPMFTEMFGASYRYSGAGVGYQVASVVGGGFTPFIAAALVTY 406 (438)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHCCcchhHHHHhHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 11222222333333344456788899999999999998777655 33 4566666666553
No 75
>PRK09669 putative symporter YagG; Provisional
Probab=99.11 E-value=2.3e-07 Score=98.61 Aligned_cols=347 Identities=11% Similarity=0.041 Sum_probs=178.5
Q ss_pred HHHHHHHhhHHH----HHHHHHHHHHhCCCchHHHHHHHHHHHHHHHhhhccceeeecccc----h-hHHHHHHHHHHHH
Q 011118 25 AHFLARWGARMW----EFSVGLYMISVWPDSLLFAAIYGAVESASIALFGPIVGHWVDKLT----Y-VKVLQIWLVTQNL 95 (493)
Q Consensus 25 s~~lS~~Gdr~~----~Fa~~L~lv~l~~~sll~~sv~gl~~~l~~llfg~~vG~~vDr~~----R-~~v~~~~~~~q~~ 95 (493)
++.+..+|+.+. ..-++.++...+.=|...++..-++..+.-.+..|.+|.++||.+ | |+.+..+.+.-
T Consensus 13 ~yg~g~~~~~~~~~~~~~~l~~~~t~~~gls~~~~g~i~~i~~i~dai~dp~~G~lsD~~~~r~Grrrp~il~~~~~~-- 90 (444)
T PRK09669 13 GYGLGDTACNLVWQTVMLFLAYFYTDVFGLSAAIMGTMFLVVRVLDAVTDPLMGALVDRTRTRHGQFRPYLLWFAIPF-- 90 (444)
T ss_pred hhcchhhhhhHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHcccceeeEeeecCCCCCCCcchhHHHHHHHH--
Confidence 344444554443 334455666777778888888888888889999999999999953 3 55555443222
Q ss_pred HHHHHHHHHHHHHhhcccccchhHHHHHHHHHHHHHHHHHHhhhhhhhhhhccceEEEecCCCChhhhhhhhhHHHhHHH
Q 011118 96 SFIVAGVSVITLLFFSSLKSTNFIAFVLLVILTNISGAVGVISTLAGTILIEREWVVVISEGHPPEALTKMNSIIRRIDL 175 (493)
Q Consensus 96 ~v~~s~~~~~~~l~~~~~~~~~~~~~~~l~~~~~~~g~~~~l~~~a~~iaieRDWvv~i~~~~~~~~L~~~Na~mrriDl 175 (493)
++++. ++...|.........++...+ ++.+......++... + +.+.++++ + ++.+++|+.=...-.
T Consensus 91 --~i~~~--l~f~~p~~~~~~~~~~~~~~~---~l~~~~~t~~~ip~~-a----l~~~~t~~-~-~eR~~l~~~r~~~~~ 156 (444)
T PRK09669 91 --GVVCL--LTFYTPDFGATGKIIYACVTY---ILLSLVYTAINVPYC-A----MPGAITND-P-RERHSLQSWRFALSF 156 (444)
T ss_pred --HHHHH--HHHhCCCCCcchHHHHHHHHH---HHHHHHHHhhcchHH-H----hHHHhcCC-H-HHHHHHHHHHHHHHH
Confidence 22222 111222110111122222222 122333333443322 2 24555544 3 566778877777777
Q ss_pred HHHhhhhHHHHHHHHhhh-------hHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCcchhhhhhhhccCCCcccccccCC
Q 011118 176 TCKLLAPAITGFIISFVS-------LQASAMTLAIWTTVTVWVEYWLFMSVYKGIPALAESSQRRIRRSMPIDMEQSTSM 248 (493)
Q Consensus 176 ~~~l~gP~~~G~l~~~~s-------~~~a~~~i~~~n~~S~~ve~~~l~~Vy~~~p~L~~~~~~~~~~~~~~~~~~~~~~ 248 (493)
+...++|.+...+....+ ......+.++...+..+..+ ...+|.. + +++ ++
T Consensus 157 ~G~~i~~~~~~pl~~~~~~~~~~~g~~~~~~i~~ii~~v~~~~~~-------~~~~e~~-----~-----~~~-~~---- 214 (444)
T PRK09669 157 IGGLIVSVIALPLVDILGKGDEQKGYFYAMMVMGLLGVVLFFCCF-------FMTKERY-----T-----PEV-DN---- 214 (444)
T ss_pred HHHHHHHHHHHHHHHHhCCCchhhhHHHHHHHHHHHHHHHHHHHh-------CCeEEec-----C-----CCC-cC----
Confidence 777788777666665442 22233322333323222211 1111100 0 000 00
Q ss_pred ccccccccccccchhHHHHHHHHHHHHhhhccccccccceeeecccchHHHHHHHHHHHHhhh-hhhHHHHHHHH-cCCC
Q 011118 249 PRERESLLSHDENNAELAEKRWRWKIIDWISNAPCVGAWQVYLKQEVVLPGVSLALLFFTVLS-FGTLMTATLEW-EGIP 326 (493)
Q Consensus 249 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~y~~q~v~la~~alalLy~tVL~-f~~l~~~yl~~-~gls 326 (493)
..+ ..++++..+++|.++..+...+++..... .++...-|.+. .+ +
T Consensus 215 ------------~~~-------------------~~~~~~~~~~n~~~~~l~~~~~~~~~~~~~~~~~~~y~~~~~~~-~ 262 (444)
T PRK09669 215 ------------SSS-------------------VWKDLKLLLGNSQWRIMFIFNVVLLTAVVTRGGATLYYVNYVLL-R 262 (444)
T ss_pred ------------CCC-------------------HHHHHHHHhCCchHHHHHHHHHHHHHHHHHHhhhhheeeeeecC-C
Confidence 000 12233344577777777666655533322 23333323333 33 3
Q ss_pred chHHHHHHHHHHHHHHHHHHHHHHHHhhhchhhhhHHHHHHHHHHHHHHHHHHhhcchHHHHHHHHHHHHhhhchhhhhh
Q 011118 327 AYIIGIARGISATIGIAATILYPILQSRISTLRTGLWSIWSQWFCLLICVASIWIHNSLVAAYMLMVGVATSRLGLWMFD 406 (493)
Q Consensus 327 ~~~iG~~r~~~av~GllgT~~~~~l~~riGl~r~g~~~~~~q~~~L~~~v~~~~~~~~~~s~~~l~~gi~~SR~GLw~fD 406 (493)
+...+.+...+.+.+++++.+.+++.+|+|-.+.-.++... +...++..+..+... ...+....++..+|.....
T Consensus 263 ~~~~~~~~~~~~i~~ii~~~~~~~l~~r~gk~~~~~~~~~~---~~~~~~~~~~~~~~~--~~~~~~~~~i~g~~~~~~~ 337 (444)
T PRK09669 263 PDLATLFLVTGMIAGLFGALLSERLLGKFDRVRAFKWTIVA---FVILSALIFFIPPSN--VWLIFALNILFNFIQNLTT 337 (444)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHhChHHHHHHHHHH---HHHHHHHHHHhCcch--HHHHHHHHHHHHHHHHHHH
Confidence 44556677788889999999999999999977766655431 111122222222111 2223334445566666666
Q ss_pred hhhhhhhhccCCCC-------cchhHHHHHHHHHHhh-HHHHHHHHHh
Q 011118 407 LSVIQQMQDLVPES-------DRCVVGGVQNSLQSTM-DLMAYTMGII 446 (493)
Q Consensus 407 l~~~~l~Qe~vp~~-------~rG~v~gv~~sl~~~f-~l~~~~~~ii 446 (493)
.....++=+.+|++ ..|..+|+....+++. -++..+.+.+
T Consensus 338 ~~~~am~ad~~d~~e~~~G~r~~g~~~s~~~~~~klg~alg~~i~g~l 385 (444)
T PRK09669 338 PLQWSMFSDVVDYEEKRSGRRLDGLVFSTNLFAIKLGLAIGGAVVGWI 385 (444)
T ss_pred HHHHHHHHhhhhhhhhhcCcCcchHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 66677776666533 3455667666655655 4555555543
No 76
>PRK10077 xylE D-xylose transporter XylE; Provisional
Probab=99.08 E-value=3.1e-07 Score=97.84 Aligned_cols=126 Identities=8% Similarity=0.062 Sum_probs=74.4
Q ss_pred HHHHcCCCchHHHHHHHHHHHHHHHHHHHHHHHHhhhchhhhhHHHHHHHHHHHHHHHHHHhhcchHHHHHHHHHHHHhh
Q 011118 319 TLEWEGIPAYIIGIARGISATIGIAATILYPILQSRISTLRTGLWSIWSQWFCLLICVASIWIHNSLVAAYMLMVGVATS 398 (493)
Q Consensus 319 yl~~~gls~~~iG~~r~~~av~GllgT~~~~~l~~riGl~r~g~~~~~~q~~~L~~~v~~~~~~~~~~s~~~l~~gi~~S 398 (493)
+..+.|++...-+..-...++.++.++++.+++.+|+|-.+...++.....++..........+.... .. ..++...
T Consensus 297 i~~~~g~~~~~~~~~~~~~~~~~~i~~~~~g~l~dr~g~r~~~i~~~~~~~v~~~~l~~~~~~~~~~~-~~--~~~~~~~ 373 (479)
T PRK10077 297 IFKTLGASTDIALLQTIIVGVINLTFTVLAIMTVDKFGRKPLQIIGALGMAIGMFSLGTAFYTQAPGI-VA--LLSMLFY 373 (479)
T ss_pred HHHHcCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHhcChHHHHHhHHHHHHHHHHHHHHHhcCcccH-HH--HHHHHHH
Confidence 33467888776666666677788999999999999999666555555432222221111111111111 11 1111111
Q ss_pred hchhh-hhhhhhhhhhhccCCCCcchhHHHHHHHHHHhhH-HHHHHHHHhc
Q 011118 399 RLGLW-MFDLSVIQQMQDLVPESDRCVVGGVQNSLQSTMD-LMAYTMGIII 447 (493)
Q Consensus 399 R~GLw-~fDl~~~~l~Qe~vp~~~rG~v~gv~~sl~~~f~-l~~~~~~ii~ 447 (493)
..+.. .+......+.+|..|+++||+..|...+.+++.. ++.++...+.
T Consensus 374 ~~~~~~~~~~~~~~~~~e~~p~~~r~~~~g~~~~~~~~g~~~~~~~~p~~~ 424 (479)
T PRK10077 374 VAAFAMSWGPVCWVLLSEIFPNAIRGKALAIAVAAQWIANYFVSWTFPMMD 424 (479)
T ss_pred HHHHhccccchhHHHhHhhCChhHHHHHHHHHHHHHHHHHHHHHHHhHHHH
Confidence 11111 1235567889999999999999999999988884 4445555443
No 77
>TIGR00924 yjdL_sub1_fam amino acid/peptide transporter (Peptide:H+ symporter), bacterial. The model describes proton-dependent oligopeptide transporters in bacteria. This model is restricted in its range in recognizing bacterial proton-dependent oligopeptide transporters, although they are found in yeast, plants and animals. They function by proton symport in a 1:1 stoichiometry, which is variable in different species. All of them are predicted to contain 12 transmembrane domains, for which limited experimental evidence exists.
Probab=99.05 E-value=7.3e-07 Score=96.25 Aligned_cols=388 Identities=9% Similarity=-0.030 Sum_probs=195.0
Q ss_pred chhhHHHHHHHHHHHHHhhHHHHHHHHHHHHHh--CCCchHHHHHHHHHHHHHHHhhhccceeeecc-cchhHHHHHHHH
Q 011118 15 TSFLTTYLYVAHFLARWGARMWEFSVGLYMISV--WPDSLLFAAIYGAVESASIALFGPIVGHWVDK-LTYVKVLQIWLV 91 (493)
Q Consensus 15 ~~~~~~~L~~s~~lS~~Gdr~~~Fa~~L~lv~l--~~~sll~~sv~gl~~~l~~llfg~~vG~~vDr-~~R~~v~~~~~~ 91 (493)
+.|..+.++...++.+.+--...--+|+++..- ++-|....+..-..-.+...+..+..|.+.|| .+|||++..+.+
T Consensus 8 ~p~~~~~l~~~~~~~~~~~~~~~~~L~~yl~~~~~lg~s~~~ag~~~~~~~~~~~~~~~~~G~laDr~~G~~~~l~~~~~ 87 (475)
T TIGR00924 8 HPKPLFTLFFVELWERFSYYGMQGILAVYLVQQAGLGFSQEQAFIIFGAYSALVYLLTSVGWWFGDRVWGTKKTMVLGGI 87 (475)
T ss_pred CChhHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHhhHHHHHHhhcchHHHHHHHHH
Confidence 335788899999999999888888888888765 66677888888888888889999999999999 799999888875
Q ss_pred HHHHHHHHHHHHHHHHHhhcccccchhHHHHHHHHHHHHHHHHHHhhhhhhhhhhccceEEEecCCCChhhhhhhhhHHH
Q 011118 92 TQNLSFIVAGVSVITLLFFSSLKSTNFIAFVLLVILTNISGAVGVISTLAGTILIEREWVVVISEGHPPEALTKMNSIIR 171 (493)
Q Consensus 92 ~q~~~v~~s~~~~~~~l~~~~~~~~~~~~~~~l~~~~~~~g~~~~l~~~a~~iaieRDWvv~i~~~~~~~~L~~~Na~mr 171 (493)
...+. .. ++.. . .++..+.... .+.+..+.++.+. ..+.-.||.+ ++++++..+..+...
T Consensus 88 ~~~~g----~~---~~~~----~-~~~~~~~~~~---~l~g~g~g~~~~~-~~~~~a~~~~----~~~~~~r~~~~~~~~ 147 (475)
T TIGR00924 88 VLMLG----HF---MLAM----S-IYPDLIFYGL---GTIAVGSGLFKAN-PSSMVGKLYE----RGDMPRRDGGFTLFY 147 (475)
T ss_pred HHHHH----HH---HHHh----c-ccHhHHHHHH---HHHHhccccccCC-HHHHHHHhcC----CCCcccccceehhHH
Confidence 43333 11 1111 1 1111111111 1223334444333 2233335553 221123455666777
Q ss_pred hHHHHHHhhhhHHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCcchhhhhhhhccCCCcccccccCCccc
Q 011118 172 RIDLTCKLLAPAITGFIISFVSLQASAMTLAIWTTVTVWVEYWLFMSVYKGIPALAESSQRRIRRSMPIDMEQSTSMPRE 251 (493)
Q Consensus 172 riDl~~~l~gP~~~G~l~~~~s~~~a~~~i~~~n~~S~~ve~~~l~~Vy~~~p~L~~~~~~~~~~~~~~~~~~~~~~~~~ 251 (493)
-.-.++.++||.++|.+.+..|++.+....++...++.+. +++..+-|+..|.-. + +.+.++.+.....
T Consensus 148 ~~~niG~~ig~~l~g~l~~~~g~~~~f~~~~~~~~~~~l~-~~~~~~~~~~~~~~~---~-------~~~~~~~~~~~~~ 216 (475)
T TIGR00924 148 MSINIGSFISPLLAGVIAENYGYHVGFNLAAVGMVIGLLT-FFAGRHMLRDIGSVP---D-------PLSGQGKTYGKLL 216 (475)
T ss_pred HHHHHHHHHHHHHHHHHHHhcChHHHHHHHHHHHHHHHHH-HHHcccccccCCCCC---C-------CcchhhhhhHHHH
Confidence 7888999999999999998778766553333222222211 222222221111100 0 0000000000000
Q ss_pred -----------cccccccccchhHHHHH-----HHHHHHHhhhccccccccceeeecccchHHHHHHHHHHHHhh-hhhh
Q 011118 252 -----------RESLLSHDENNAELAEK-----RWRWKIIDWISNAPCVGAWQVYLKQEVVLPGVSLALLFFTVL-SFGT 314 (493)
Q Consensus 252 -----------~~~~~~~~~~~~~~~~~-----~~~~~~~~~l~~~~~~~g~~~y~~q~v~la~~alalLy~tVL-~f~~ 314 (493)
.......+....+.... .+.. ..++..+. ......-.+...+.+.+....+|..+. ..++
T Consensus 217 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~--~~~~~~~~~~~~~l~l~~~~~~~~~~~~Q~~s 293 (475)
T TIGR00924 217 LALLAALALVFFCAWLMHHVVIANILLMTVTLAVIIF-FFRLAFKP--RLDAVARNKMYAYIVLFLEAVVFWVLYAQMPT 293 (475)
T ss_pred HHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHH-HHHHHHhc--cCCHHHHhHHHHHHHHHHHHHHHHHHHHHhhh
Confidence 00000000000000000 0000 00000000 000000011223455555555554442 3444
Q ss_pred HHHHHHHH-cCCCch----HHHHHHHHHHHHHHHHHHH----HHHHHhh-hchhhhh--HHHHHHHHHH-HHHHHHHHhh
Q 011118 315 LMTATLEW-EGIPAY----IIGIARGISATIGIAATIL----YPILQSR-ISTLRTG--LWSIWSQWFC-LLICVASIWI 381 (493)
Q Consensus 315 l~~~yl~~-~gls~~----~iG~~r~~~av~GllgT~~----~~~l~~r-iGl~r~g--~~~~~~q~~~-L~~~v~~~~~ 381 (493)
.++.|..+ .+.+.. -.+.+.++.++.=++.+.. ++++.|| .+..... .++...-.++ ...++.....
T Consensus 294 ~l~l~~~~~~~~~~~~~~ip~~~~~~~n~~~iil~~p~~~~~~~~l~~~~~~~~~~~k~~~G~~l~~~~~~~~~~~~~~~ 373 (475)
T TIGR00924 294 SLNFFADNNMHHEMLGMSVPVIWFQSLNPFWVVVGSPVLAMIWTRLGRKGKDPTTPLKFTLGMLFCGASFLTFAASIWFA 373 (475)
T ss_pred HHHHHHHHhccccccceEECHHHHHhhhHHHHHHHHHHHHHHHHHHHhCCCCCCcHHHHHHHHHHHHHHHHHHHHHHhhc
Confidence 45556653 333321 2566777766666666544 4566665 2222111 2222211111 1111111111
Q ss_pred c-chHHHHHHHHHHHHhhhchhhhhhhhhhhhhhccCCCCcchhHHHHHHHHHHhh
Q 011118 382 H-NSLVAAYMLMVGVATSRLGLWMFDLSVIQQMQDLVPESDRCVVGGVQNSLQSTM 436 (493)
Q Consensus 382 ~-~~~~s~~~l~~gi~~SR~GLw~fDl~~~~l~Qe~vp~~~rG~v~gv~~sl~~~f 436 (493)
. +...+...++...++..+|=-....+..++.=+..|++.||+..|+......+-
T Consensus 374 ~~~~~~s~~~~i~~~~~~~~ge~~~~p~~~~~~~~~aP~~~~g~~~g~~~l~~~~g 429 (475)
T TIGR00924 374 DAGGLTSPWFMVLIYLFQTLGELMISPLGLSWWTKIAPQRLMGQMLGMWFLAQAMG 429 (475)
T ss_pred CCCCccCHHHHHHHHHHHHHHHHHHhHHHHHHHHHhCCHHHHHHHHHHHHHHHHHH
Confidence 1 113456666667777778878888899999989999999999999988555554
No 78
>TIGR00898 2A0119 cation transport protein.
Probab=99.03 E-value=6.5e-08 Score=104.11 Aligned_cols=366 Identities=13% Similarity=0.109 Sum_probs=173.4
Q ss_pred hHHHHHHHHHHHHHHHhhhccceeeecccchhHHHHHHHHHHHHHHHHHHHHHHHHHhhcccccchhHHHHHHHHHHHHH
Q 011118 52 LLFAAIYGAVESASIALFGPIVGHWVDKLTYVKVLQIWLVTQNLSFIVAGVSVITLLFFSSLKSTNFIAFVLLVILTNIS 131 (493)
Q Consensus 52 ll~~sv~gl~~~l~~llfg~~vG~~vDr~~R~~v~~~~~~~q~~~v~~s~~~~~~~l~~~~~~~~~~~~~~~l~~~~~~~ 131 (493)
....+....+..+..++.++..|.+.||++||+++..+.+...+. +. ...+. .++..+.+.. .+.
T Consensus 126 ~~~~~~~~s~~~~g~~~g~~~~g~l~Dr~Grr~~~~~~~~~~~i~----~~--~~~~~------~~~~~~~~~r---~l~ 190 (505)
T TIGR00898 126 AWKVDLTQSCFFVGVLLGSFVFGYLSDRFGRKKVLLLSTLVTAVS----GV--LTAFS------PNYTVFLVFR---LLV 190 (505)
T ss_pred HHHHHHHHHHHHHHHHHHHHhHHHhhhhccchHHHHHHHHHHHHH----HH--HHHHc------ccHHHHHHHH---HHH
Confidence 566788888888999999999999999999999988876444433 11 11111 1222222221 223
Q ss_pred HHHHHhhhhhhhhhhccceEEEecCCCChhhhhhhhhHHHhHHHHHHhhhhHHHHHHHHhhhhHHHHHHHHHHHHHHHHH
Q 011118 132 GAVGVISTLAGTILIEREWVVVISEGHPPEALTKMNSIIRRIDLTCKLLAPAITGFIISFVSLQASAMTLAIWTTVTVWV 211 (493)
Q Consensus 132 g~~~~l~~~a~~iaieRDWvv~i~~~~~~~~L~~~Na~mrriDl~~~l~gP~~~G~l~~~~s~~~a~~~i~~~n~~S~~v 211 (493)
|.......+. ...+-.||+ ++ ++....++...-.-.+..+++|.+++.+.++ +....+..+..++..+
T Consensus 191 G~~~~~~~~~-~~~~~~e~~----~~---~~r~~~~~~~~~~~~~g~~~~~~~~~~~~~w---r~~~~~~~i~~~~~~~- 258 (505)
T TIGR00898 191 GMGIGGIWVQ-AVVLNTEFL----PK---KQRAIVGTLIQVFFSLGLVLLPLVAYFIPDW---RWLQLAVSLPTFLFFL- 258 (505)
T ss_pred HhhccchHHH-HHHHhheec----Ch---hhhHHHHHHHHHHHHHHHHHHHHHHHHhhHH---HHHHHHHHHHHHHHHH-
Confidence 3333333322 223334554 33 3456677777777778888899888777653 2222222222222211
Q ss_pred HHHHHHHHHhhcCcchh----hhhhhhccCCCcccccccCCccccccccccccchhHHHHHHHHHHHHhhhccccccccc
Q 011118 212 EYWLFMSVYKGIPALAE----SSQRRIRRSMPIDMEQSTSMPRERESLLSHDENNAELAEKRWRWKIIDWISNAPCVGAW 287 (493)
Q Consensus 212 e~~~l~~Vy~~~p~L~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~ 287 (493)
+.. ..||-++ +.+.++.++.-.+..+.++... . ++...... .++ .++ +. -..++
T Consensus 259 ---~~~----~~~esp~~l~~~~~~~~a~~~l~~~~~~~~~~~------~--~~~~~~~~---~~~-~~~--~~-~~~~~ 316 (505)
T TIGR00898 259 ---LSW----FVPESPRWLISQGRIEEALKILQRIAKINGKKL------P--AEVLSLSL---EKD-LSS--SK-KQYSF 316 (505)
T ss_pred ---HHH----hcCCChHHHHHCCCHHHHHHHHHHHHHHcCCCC------C--HHHHhhhh---hhh-hhh--cc-CCCcH
Confidence 111 2333210 0000000000000000000000 0 00000000 000 000 00 02355
Q ss_pred eeeecccchHHHHHHH-HHHHHh-hhhhhHHHHHHHHcCCCchHHHHHHHHHHHHHHHHHHHHHHHHhhhchhhhhHHHH
Q 011118 288 QVYLKQEVVLPGVSLA-LLFFTV-LSFGTLMTATLEWEGIPAYIIGIARGISATIGIAATILYPILQSRISTLRTGLWSI 365 (493)
Q Consensus 288 ~~y~~q~v~la~~ala-lLy~tV-L~f~~l~~~yl~~~gls~~~iG~~r~~~av~GllgT~~~~~l~~riGl~r~g~~~~ 365 (493)
+..+++|.++...... +.++.. ..+.+ +..+....+.+......+ .++.++.|.++.+++.+|+|-.+...++.
T Consensus 317 ~~l~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~---~~~~~i~~~~~~~~l~dr~grr~~~~~~~ 392 (505)
T TIGR00898 317 LDLFRTPNLRKTTLCLMMLWFTTAFSYYG-LVLDLGNLGGNIYLDLFI---SGLVELPAKLITLLLIDRLGRRYTMAASL 392 (505)
T ss_pred HHHhCChHHHHHHHHHHHHHHHHHHHHHH-HhccccccCCChHHHHHH---HHHHHHHHHHHHHHHHHHhCCHHHHHHHH
Confidence 5567777666554443 323221 11111 122333456555444443 44577888899999999999766655554
Q ss_pred HHHHHHHHHHHHHHhhcch--HHHHHHHHHHHHhhhchhhhhhhhhhhhhhccCCCCcchhHHHHHHHHHHhhH-HHHHH
Q 011118 366 WSQWFCLLICVASIWIHNS--LVAAYMLMVGVATSRLGLWMFDLSVIQQMQDLVPESDRCVVGGVQNSLQSTMD-LMAYT 442 (493)
Q Consensus 366 ~~q~~~L~~~v~~~~~~~~--~~s~~~l~~gi~~SR~GLw~fDl~~~~l~Qe~vp~~~rG~v~gv~~sl~~~f~-l~~~~ 442 (493)
.... ..+++..+.+.. ..... ...+..++.-+.-.....+.+|..|++.||+..|+.++...+.. +..++
T Consensus 393 ~~~~---~~~l~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~~~g~~~~~~~ig~~i~p~i 465 (505)
T TIGR00898 393 LLAG---VALLLLLFVPVDLYFLRTA----LAVLGKFGITSAFQMVYLYTAELYPTVVRNLGVGVCSTMARVGSIISPFL 465 (505)
T ss_pred HHHH---HHHHHHHHcCCCchHHHHH----HHHHHHHHHHHHHHHHHHHhcccccHHHHhhhHhHHHHHHHHHHHHHhHH
Confidence 3222 222222233322 11111 12222233333334556788999999999999999988887773 33344
Q ss_pred HHHhccCCCCchHHHHHHHHHHHHHHHHHHHHHHHhhcC
Q 011118 443 MGIIISNPQDFWKLILISVIVVTLAAILYTFHLYRIRKH 481 (493)
Q Consensus 443 ~~ii~~~p~~F~~l~~~S~~~V~~~~~l~~~~~~~~Rgh 481 (493)
.+ + .+........+.+..++.++... .++...||+
T Consensus 466 ~~-~-~~~~~~~~~~~~~~~~~~~~~~~--~~lpet~~~ 500 (505)
T TIGR00898 466 VY-L-GEKWLFLPLVLFGGLALLAGILT--LFLPETKGV 500 (505)
T ss_pred HH-H-HHHHHhhHHHHHHHHHHHHHHHH--HcCcCCCCC
Confidence 44 2 22223333444444444433333 344445553
No 79
>TIGR00885 fucP L-fucose:H+ symporter permease. This family describes the L-fucose permease in bacteria. L-fucose(6-deoxy-L-galactose) is a monosaccharide found in glycoproteins and cell wall polysaccharides. L-fucose is used in bacteria through an inducible pathway mediated by atleast four enzymes: a permease, isomerase, kinase and an aldolase which are encoded by fucP, fucI, fucK, fucA respectively. The fuc genes belong to a regulon comprising of four linked operons: fucO, fucA, fucPIK and fucR. The positive regulator is encoded by fucR, whose protein responds to fuculose-1-phosphate, which acts as an effector.
Probab=99.02 E-value=2.2e-06 Score=90.74 Aligned_cols=348 Identities=13% Similarity=0.092 Sum_probs=184.8
Q ss_pred HHHHHHHHHHHHHhhHHHHHHHHHHHHHhCCCchHHHHHHHHHHHHHHHhhhccceeeecccchhHHHHHHHHHHHHHHH
Q 011118 19 TTYLYVAHFLARWGARMWEFSVGLYMISVWPDSLLFAAIYGAVESASIALFGPIVGHWVDKLTYVKVLQIWLVTQNLSFI 98 (493)
Q Consensus 19 ~~~L~~s~~lS~~Gdr~~~Fa~~L~lv~l~~~sll~~sv~gl~~~l~~llfg~~vG~~vDr~~R~~v~~~~~~~q~~~v~ 98 (493)
+..++..-++--..+.+..-..|.+ .+-++-|....+.......+..++.+++.|.+.||++||+++..+.++-.+.
T Consensus 5 ~~~~~~~f~~~G~~~~~~~~l~~~~-~~~~~~s~~~~g~l~s~~~~g~~i~~~~~g~l~~r~G~r~~~~~g~~l~~~g-- 81 (410)
T TIGR00885 5 FALITSLFALWGFANDITNPMVPQF-QQAFTLTAFQAALVQSAFYGGYFIMAIPAAIFMKKLSYKAGILLGLFLYALG-- 81 (410)
T ss_pred HHHHHHHHHHHHHHHHhHHHHHHHH-HHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCchHHHHHHHHHHHHH--
Confidence 3344444444445556666667775 4566778889999999999999999999999999999999998887443333
Q ss_pred HHHHHHHHHHhhcccccchhHHHHHHHHHHHHHHHHHHhhhhhhhhhhccceEEEecCCCChhhhhhhhhHHHhHHHHHH
Q 011118 99 VAGVSVITLLFFSSLKSTNFIAFVLLVILTNISGAVGVISTLAGTILIEREWVVVISEGHPPEALTKMNSIIRRIDLTCK 178 (493)
Q Consensus 99 ~s~~~~~~~l~~~~~~~~~~~~~~~l~~~~~~~g~~~~l~~~a~~iaieRDWvv~i~~~~~~~~L~~~Na~mrriDl~~~ 178 (493)
+.+ ..+ .....++..+... ..+.|+...+..++.+.. +..+.++ ++..+..+..+..-.+..
T Consensus 82 --~~l----~~~-~~~~~~~~~~l~~---~~l~G~g~g~~~~~~~~~-----~~~~~~~---~~~~~~~~~~~~~~~lG~ 143 (410)
T TIGR00885 82 --AFL----FWP-AAEIMNYTLFLVG---LFILTAGLGFLETAANPY-----ILVMGPE---STATRRLNLAQSFNPFGS 143 (410)
T ss_pred --HHH----HHH-HHhhccHHHHHHH---HHHHHhhHHHHHhhhhHH-----HHHHCCH---hHHHHHHHHHHHHHHHHH
Confidence 111 111 0011222222211 122233333333222222 1112222 345666777788888999
Q ss_pred hhhhHHHHHHHHhh--------------------------hhHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCcchhhhhh
Q 011118 179 LLAPAITGFIISFV--------------------------SLQASAMTLAIWTTVTVWVEYWLFMSVYKGIPALAESSQR 232 (493)
Q Consensus 179 l~gP~~~G~l~~~~--------------------------s~~~a~~~i~~~n~~S~~ve~~~l~~Vy~~~p~L~~~~~~ 232 (493)
.+||.+++.+.... +.+.....+++...+. ..+.. +.+.|+..++
T Consensus 144 ~~g~~i~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~~~fl~~a~~~~~~----~~~~~--~~~~p~~~~~--- 214 (410)
T TIGR00885 144 IIGMVVAQQLILSNLPHQSQDVLDKLSPEELSAIKHSDLASVQTPYMIIGAVVLAV----ALLIM--LTKMPALNHS--- 214 (410)
T ss_pred HHHHHHHHHHHhcCCccchhhhhhhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH----HHHHH--HhcCCCCCcc---
Confidence 99999999886431 2233332222222211 11111 2234532100
Q ss_pred hhccCCCcccccccCCccccccccccccchhHHHHHHHHHHHHhhhccccccccceeeecccchHHHHHHHHHHHHh-hh
Q 011118 233 RIRRSMPIDMEQSTSMPRERESLLSHDENNAELAEKRWRWKIIDWISNAPCVGAWQVYLKQEVVLPGVSLALLFFTV-LS 311 (493)
Q Consensus 233 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~y~~q~v~la~~alalLy~tV-L~ 311 (493)
+ + ++ .+ ..+.++..+++|.++......++|..+ .+
T Consensus 215 ~-----~---~~-----------------~~-------------------~~~~~~~~~~~~~~~~~~l~~f~yvg~e~~ 250 (410)
T TIGR00885 215 D-----A---KQ-----------------IS-------------------FSASLSRLARIRHYREGVIAQFFYVGVQIM 250 (410)
T ss_pred c-----c---cc-----------------cc-------------------chhhHHHHHhChhHHHHHHHHHHHHHHHHH
Confidence 0 0 00 00 001111224566666666666777544 34
Q ss_pred hhhHHHHHHHHc--CCCchHHHHHHHHHHHHHHHHHHHHHHHHhhhchhhhhHHHHHHHHHHHHHHHHHHhhcchHHHHH
Q 011118 312 FGTLMTATLEWE--GIPAYIIGIARGISATIGIAATILYPILQSRISTLRTGLWSIWSQWFCLLICVASIWIHNSLVAAY 389 (493)
Q Consensus 312 f~~l~~~yl~~~--gls~~~iG~~r~~~av~GllgT~~~~~l~~riGl~r~g~~~~~~q~~~L~~~v~~~~~~~~~~s~~ 389 (493)
..+.+..|+.+. +.++..-+.+.+..-.....|-++.+++.+|++..|.-.+... .+...+++..+.++......
T Consensus 251 ~~s~l~~y~~~~~~~~~~~~a~~~~~~~~~~~~vGR~~~~~l~~r~~~~~~l~i~~~---~~~~~~ll~~~~~~~~~~~~ 327 (410)
T TIGR00885 251 CWTFIIQYAVRLIPGMTAGFAANYNIGAMVIFFISRFIGTWLISYLAAHKVLMAYAI---IGMALCLGSIFAGGHVGLYC 327 (410)
T ss_pred HHHHHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCHHHHHHHHHH---HHHHHHHHHHHcCChHHHHH
Confidence 556678888764 3343333333333333445677777888888887765444333 23333333344443222333
Q ss_pred HHHHHHHhhhchhhhhhhhhhhhhhccCCCCcchhHHHHHHHHHHhhHHHHHHHHHhccC
Q 011118 390 MLMVGVATSRLGLWMFDLSVIQQMQDLVPESDRCVVGGVQNSLQSTMDLMAYTMGIIISN 449 (493)
Q Consensus 390 ~l~~gi~~SR~GLw~fDl~~~~l~Qe~vp~~~rG~v~gv~~sl~~~f~l~~~~~~ii~~~ 449 (493)
+.+.|...|-+ | .+..++..+..+++......+...+. -+--++..++|.+...
T Consensus 328 l~~~glf~s~~--f---p~i~sl~~~~~g~~~~~~s~~l~~~~-~Gga~~p~l~G~~~d~ 381 (410)
T TIGR00885 328 LTLCSAFMSLM--F---PTIYGIALKGLGQDTKYGAAGLVMAI-IGGGIVPPLQGFIIDM 381 (410)
T ss_pred HHHHHHHHHHH--H---HHHHHHHHhhhhhhhhhhHHHHHHHH-hccchHHHHHHHHHHH
Confidence 44444444432 3 56677777777777654455555554 3446667777877763
No 80
>TIGR00788 fbt folate/biopterin transporter. The only functionally characterized members of the family are from protozoa and include FT1, the major folate transporter in Leishmania, and BT1, the Leishmania biopterin/folate transporter. A related protein in Trypanosoma brucei, ESAGIO, shows weak folate/biopterin transport activity.
Probab=99.02 E-value=4e-08 Score=105.83 Aligned_cols=382 Identities=8% Similarity=-0.055 Sum_probs=197.8
Q ss_pred HHHHHHHHHHHHHhhHHHHHHHHHHHHHhCCCchHHHHHHHHHHHHHHHhhhccceeeecccc-----hhHHHHHHHHHH
Q 011118 19 TTYLYVAHFLARWGARMWEFSVGLYMISVWPDSLLFAAIYGAVESASIALFGPIVGHWVDKLT-----YVKVLQIWLVTQ 93 (493)
Q Consensus 19 ~~~L~~s~~lS~~Gdr~~~Fa~~L~lv~l~~~sll~~sv~gl~~~l~~llfg~~vG~~vDr~~-----R~~v~~~~~~~q 93 (493)
...+|.++-+. .+-..+++.++-.-+.-|.-.++.+.....+|..+ -++.|.++||++ ||+.+..+.+..
T Consensus 31 ~~~~y~~qGl~----~l~~~~~~~~l~~~lg~s~~~i~~~~sl~~lpw~~-K~l~g~l~D~~~i~G~rRr~~l~~~~~l~ 105 (468)
T TIGR00788 31 GLQVLFVKGIA----GLMRLPLSPMLTDDLGLDGARYQRLVGLSSLGWAL-KPFAGVMSDTFPLFGYTKRWYLVLSGLLG 105 (468)
T ss_pred HHHHHHHhhHH----HHhhhhhhHHHHHhcCCCHHHHHHHHHHHHHHHHH-HHHHHHHHHhcCCCCccchHHHHHHHHHH
Confidence 34456655553 55556677767766677888888888888888887 777999999997 777666554221
Q ss_pred HHHHHHHHHHHHHHHhhcccccchhH-HHHHHHHHHHHHHHHHHhhhhhhhhhhccceEEEecCCCChhhhhhhhhHHHh
Q 011118 94 NLSFIVAGVSVITLLFFSSLKSTNFI-AFVLLVILTNISGAVGVISTLAGTILIEREWVVVISEGHPPEALTKMNSIIRR 172 (493)
Q Consensus 94 ~~~v~~s~~~~~~~l~~~~~~~~~~~-~~~~l~~~~~~~g~~~~l~~~a~~iaieRDWvv~i~~~~~~~~L~~~Na~mrr 172 (493)
. +.+ +..+.. ..+.. ....+.. +.+......+++..-. ++...+ ++++....+-+..-+
T Consensus 106 ~------~~~-~~~l~~----~~~~~~~~~~~~~---l~~~~~a~~dv~~da~-----~~e~~~-~~~~~~~~~~s~~~~ 165 (468)
T TIGR00788 106 S------AIL-YGLLPG----KVSSAKVAAAFIF---LAALAKALYDVLVDSL-----YSERIR-ESPSAGPSLVSWMWG 165 (468)
T ss_pred H------HHH-HHhccc----ccchHHHHHHHHH---HHHHHHHHHHHhHHHH-----Hhhhhh-cCCCcCCCeeeHHHH
Confidence 1 111 111111 11211 2211221 2233334444443222 222223 221111112223334
Q ss_pred HHHHHHhhhhHHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCcchhhhhhhhccCCCcccccccCCcccc
Q 011118 173 IDLTCKLLAPAITGFIISFVSLQASAMTLAIWTTVTVWVEYWLFMSVYKGIPALAESSQRRIRRSMPIDMEQSTSMPRER 252 (493)
Q Consensus 173 iDl~~~l~gP~~~G~l~~~~s~~~a~~~i~~~n~~S~~ve~~~l~~Vy~~~p~L~~~~~~~~~~~~~~~~~~~~~~~~~~ 252 (493)
.-....++||.++|.+....+......+.++.-.+..+ ... ..||.+. . . +|+..+....-+.
T Consensus 166 ~~~~G~~vg~~l~G~l~~~~~~~~~f~~~a~l~ll~~~----~~~----~~~E~~~----~-~--~~~~~~~~~~~~~-- 228 (468)
T TIGR00788 166 ASATGGLISSLLGGPLLDKTLTRILFLITAALLLLQLF----VSN----LSKERRA----F-V--RPRIGTYLEMNMA-- 228 (468)
T ss_pred HHHHHHHHHHHHHHHHHHhcCcchHHHHHHHHHHHHHH----HHH----hcccccc----c-c--cccccccchhhhh--
Confidence 44579999999999999887766655433333222211 111 2333110 0 0 0000000000000
Q ss_pred ccccccccchhHHHHHHHHHHHHhhhccccccccceeeecccchHHHHHHHHH-HHHhhhhhhHH-HHHHHHcCCCchHH
Q 011118 253 ESLLSHDENNAELAEKRWRWKIIDWISNAPCVGAWQVYLKQEVVLPGVSLALL-FFTVLSFGTLM-TATLEWEGIPAYII 330 (493)
Q Consensus 253 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~y~~q~v~la~~alalL-y~tVL~f~~l~-~~yl~~~gls~~~i 330 (493)
.. ..+......++ + .+.+..+++|.+...+++.++ |...-+..+-+ ..+-...|+++..+
T Consensus 229 ----------~~--~~~~~~~~~~~-----~-~~l~~~l~~~~i~~~l~fifl~~~~~~~~~~~~f~~~~~~lG~s~~~~ 290 (468)
T TIGR00788 229 ----------LL--TLGVLANVKVQ-----I-LGLRGAIQLLEIAKPLIFIFLSYANLPGASGSVFCATTQCLPGGPSFS 290 (468)
T ss_pred ----------hh--hhhHHHHHHHH-----H-HHHHHHHhcHHHHHHHHHHHHHHhhcCCCCceeEEEEcccCCCCcchh
Confidence 00 00000000000 1 112223577877777777766 64332222111 11122589999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhhhchhhhhHHHHHHHHHHHHHHH--HHHhhcchH-HHHHHHHHHHHhhhchhhhhhh
Q 011118 331 GIARGISATIGIAATILYPILQSRISTLRTGLWSIWSQWFCLLICV--ASIWIHNSL-VAAYMLMVGVATSRLGLWMFDL 407 (493)
Q Consensus 331 G~~r~~~av~GllgT~~~~~l~~riGl~r~g~~~~~~q~~~L~~~v--~~~~~~~~~-~s~~~l~~gi~~SR~GLw~fDl 407 (493)
|.+.+.+++++++|...++++.||++..+.-.++...+..+..... ..-|..... ..........++-.++--..-+
T Consensus 291 G~~~~~~~v~~i~g~~~~~~~~~~~~~r~~l~~~~~l~~~~~~~~~~l~~~~~~~~gi~~~~~~~~~~~l~~~~~g~~~~ 370 (468)
T TIGR00788 291 GMSKVVGNLGSLCGVGGYDRFLKTFPYRLLFGVTTLLYTLSSLFDLILVKRWNLAFGISDEVFVLGDSIIAEVLAQLKFM 370 (468)
T ss_pred hhHHHHHHHHHHHHHHHHHHHHhhCCHHHHHHHHHHHHHHHHhCceeeeeccccccCCCCeeeeeehhHHHHHHHHHHHc
Confidence 9999999999999999999999999987777666553322211100 001100000 0011111222223333334456
Q ss_pred hhhhhhhccCCCCcchhHHHHHHHHHHhh-HHHHHHHHHhcc----CCCCchHHHHHH
Q 011118 408 SVIQQMQDLVPESDRCVVGGVQNSLQSTM-DLMAYTMGIIIS----NPQDFWKLILIS 460 (493)
Q Consensus 408 ~~~~l~Qe~vp~~~rG~v~gv~~sl~~~f-~l~~~~~~ii~~----~p~~F~~l~~~S 460 (493)
....++++.+|++++|+..|...++.++. .++..+.+++.. .-++|..+++..
T Consensus 371 ~~~~~~~~~~p~~~egt~~al~~s~~~lg~~v~~~~gg~l~~~~g~~~~~~~~~~~~i 428 (468)
T TIGR00788 371 PFLVLLARLCPSGCESSVFALLASILHLGSSVSGFLGVLLMETIGITCDNSNNLWLLI 428 (468)
T ss_pred cHHHHHHHhCCCCceehHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCcccccchHHHH
Confidence 67899999999999999999999999888 666655554433 333444444433
No 81
>PLN00028 nitrate transmembrane transporter; Provisional
Probab=98.99 E-value=1.4e-06 Score=93.82 Aligned_cols=270 Identities=7% Similarity=-0.029 Sum_probs=134.8
Q ss_pred hHHHHHHHHHHHHHhhHHHHHHHHHHHHHhCCCchHHHHHHHHHHHHHHHhhhccceeeecccchhHHHHHHHHHHHHHH
Q 011118 18 LTTYLYVAHFLARWGARMWEFSVGLYMISVWPDSLLFAAIYGAVESASIALFGPIVGHWVDKLTYVKVLQIWLVTQNLSF 97 (493)
Q Consensus 18 ~~~~L~~s~~lS~~Gdr~~~Fa~~L~lv~l~~~sll~~sv~gl~~~l~~llfg~~vG~~vDr~~R~~v~~~~~~~q~~~v 97 (493)
.+...|...++..++.-.|....|.+. +-++-|....+.......+..++..+..|.+.||++||+++..+.+.-.+.
T Consensus 37 ~~~~~~~~~~~~~~~~~~~~~~~~~l~-~~~gls~~~~g~~~~~~~~~~~~~~~~~G~l~dr~G~r~~~~~~~~~~~~~- 114 (476)
T PLN00028 37 AFHLSWISFFTCFVSTFAAAPLLPIIR-DNLNLTKSDIGNAGIASVSGSIFSRLAMGPVCDLYGPRYGSAFLLMLTAPA- 114 (476)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHH-HHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCChHHHHHHHHHHHHH-
Confidence 344555666666666656666666644 344556666777666666777777899999999999999876654222211
Q ss_pred HHHHHHHHHHHhhcccccchhHHHHHHHHHHHHHHHHHHhhhhhhhhhhccceEEEecCCCChhhhhhhhhHHHhHHHHH
Q 011118 98 IVAGVSVITLLFFSSLKSTNFIAFVLLVILTNISGAVGVISTLAGTILIEREWVVVISEGHPPEALTKMNSIIRRIDLTC 177 (493)
Q Consensus 98 ~~s~~~~~~~l~~~~~~~~~~~~~~~l~~~~~~~g~~~~l~~~a~~iaieRDWvv~i~~~~~~~~L~~~Na~mrriDl~~ 177 (493)
. ++... . .++..+.++. .+.|.......++ . ..-.||.+ + ++....++.....-..+
T Consensus 115 ---~---~~~~~----~-~s~~~l~~~r---~l~G~~~~~~~~~-~-~~i~~~~~----~---~~rg~a~g~~~~~~~~g 171 (476)
T PLN00028 115 ---V---FCMSL----V-SSATGFIAVR---FFIGFSLATFVSC-Q-YWMSTMFN----G---KIVGTANGIAAGWGNLG 171 (476)
T ss_pred ---H---HHHHH----h-cCHHHHHHHH---HHHHHHHHhhHHH-H-HHHHHhcC----h---hheeHHHHHHHHHHHHH
Confidence 1 11111 1 1221211111 1223222212222 1 12246652 2 34555666655444455
Q ss_pred HhhhhHHHHHHHHh---------hhhHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCcchhhhhhhhccCCCcccccccCC
Q 011118 178 KLLAPAITGFIISF---------VSLQASAMTLAIWTTVTVWVEYWLFMSVYKGIPALAESSQRRIRRSMPIDMEQSTSM 248 (493)
Q Consensus 178 ~l~gP~~~G~l~~~---------~s~~~a~~~i~~~n~~S~~ve~~~l~~Vy~~~p~L~~~~~~~~~~~~~~~~~~~~~~ 248 (493)
-.++|.+.+.+... .|.+....+.++..++..+.-+ ...+..|+-.. ++. ++
T Consensus 172 ~~~~~~~~~~i~~~~~~~~~~~~~gWr~~f~i~g~l~l~~~l~~~----~~~~~~p~~~~--~~~---------~~---- 232 (476)
T PLN00028 172 GGVTQLLMPLVFPLIKDAGAPSFTAWRIAFFVPGLLHIIMGILVL----TLGQDLPDGNY--REL---------KK---- 232 (476)
T ss_pred HHHHHHHHHHHHHHHHhcCCcchhhhHHHHHHHHHHHHHHHHHHH----HHcCcCCCCch--hhH---------Hh----
Confidence 55555555444321 3555555444444433332211 11111221000 000 00
Q ss_pred ccccccccccccchhHHHHHHHHHHHHhhhccccccccceeeecccch-HHHHHHHHHHHHhhhhhhHHHHHHHH-cCCC
Q 011118 249 PRERESLLSHDENNAELAEKRWRWKIIDWISNAPCVGAWQVYLKQEVV-LPGVSLALLFFTVLSFGTLMTATLEW-EGIP 326 (493)
Q Consensus 249 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~y~~q~v~-la~~alalLy~tVL~f~~l~~~yl~~-~gls 326 (493)
+...++ . .. .+ .|+..++++.+ ...+.+...+.....+.+.+..|+.+ .|++
T Consensus 233 -----------~~~~~~-~-~~-~~------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~l~~~~g~s 286 (476)
T PLN00028 233 -----------SGTMPK-D-SF-SK------------VLRYGVTNYRTWILALTYGYSFGVELTMDNIIAEYFYDRFGLS 286 (476)
T ss_pred -----------cCcccc-c-cH-HH------------HHHHHHcCchhHHHHHHHHHHHHHHHHHHhHHHHHHHHhcCCC
Confidence 000000 0 00 00 01111233322 22222222233334455667788875 6999
Q ss_pred chHHHHHHHHHHHHHHHHHHHHHHHHhhhch
Q 011118 327 AYIIGIARGISATIGIAATILYPILQSRIST 357 (493)
Q Consensus 327 ~~~iG~~r~~~av~GllgT~~~~~l~~riGl 357 (493)
+...|.+-++..++++.|.++.+++..|+|-
T Consensus 287 ~~~a~~~~~~~~~~~~ig~~~~G~lsDr~~~ 317 (476)
T PLN00028 287 LETAGAIAASFGLMNLFARPAGGYLSDVAAR 317 (476)
T ss_pred HHHHHHHHHHHHHHHHHHHhhhHHHHHHHHH
Confidence 9999999999999999999999999998874
No 82
>TIGR01299 synapt_SV2 synaptic vesicle protein SV2. This model describes a tightly conserved subfamily of the larger family of sugar (and other) transporters described by pfam model pfam00083. Members of this subfamily include closely related forms SV2A and SV2B of synaptic vesicle protein from vertebrates and a more distantly related homolog (below trusted cutoff) from Drosophila melanogaster. Members are predicted to have two sets of six transmembrane helices.
Probab=98.95 E-value=1.4e-06 Score=98.76 Aligned_cols=154 Identities=16% Similarity=0.029 Sum_probs=89.6
Q ss_pred hhHHHHHHHHHHHHHhhHHHHHHHHHHHHHh---CCCchHHHHHHHHHHHHHHHhhhccceeeecccchhHHHHHHHHHH
Q 011118 17 FLTTYLYVAHFLARWGARMWEFSVGLYMISV---WPDSLLFAAIYGAVESASIALFGPIVGHWVDKLTYVKVLQIWLVTQ 93 (493)
Q Consensus 17 ~~~~~L~~s~~lS~~Gdr~~~Fa~~L~lv~l---~~~sll~~sv~gl~~~l~~llfg~~vG~~vDr~~R~~v~~~~~~~q 93 (493)
+..+.+...-.+..+.|.+..+.+...+..+ +.-+....+....+-.+..++.++..|.+.||.+||+++..+.++.
T Consensus 163 ~~~~~l~~i~~l~~~~~g~d~~~is~ilp~i~~~~gls~~~~g~l~s~~~lG~iiG~li~G~LsDR~GRR~~lii~lil~ 242 (742)
T TIGR01299 163 RFQWALFFVLGLALMADGVEVFVVGFVLPSAEKDLCIPDSGKGMLGLIVYLGMMVGAFFWGGLADKLGRKQCLLICLSVN 242 (742)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcHHHHHHHHHHH
Confidence 4566677777777777766444444433332 4456677788888889999999999999999999999988876443
Q ss_pred HHHHHHHHHHHHHHHhhcccccchhHHHHHHHHHHHHHHHHHHhhhhhhhhhhccceEEEecCCCChhhhhhhhhHHHhH
Q 011118 94 NLSFIVAGVSVITLLFFSSLKSTNFIAFVLLVILTNISGAVGVISTLAGTILIEREWVVVISEGHPPEALTKMNSIIRRI 173 (493)
Q Consensus 94 ~~~v~~s~~~~~~~l~~~~~~~~~~~~~~~l~~~~~~~g~~~~l~~~a~~iaieRDWvv~i~~~~~~~~L~~~Na~mrri 173 (493)
.+. ++ +..+. .++..+.+.- ++.|.......+.... .-.||. .. +...+..+.++..
T Consensus 243 ~i~----~l--l~afa------~s~~~llv~R---~l~G~g~g~~~p~~~~-~isE~~----p~---~~Rg~~~g~~~~~ 299 (742)
T TIGR01299 243 GFF----AF--FSSFV------QGYGFFLFCR---LLSGFGIGGAIPIVFS-YFAEFL----AQ---EKRGEHLSWLCMF 299 (742)
T ss_pred HHH----HH--HHHHH------hhHHHHHHHH---HHHHHHHHHHHHHHHH-HHHHHC----CH---HHHHHHHHHHHHH
Confidence 332 11 11111 1122221111 1222222222222122 223343 22 3456667777777
Q ss_pred HHHHHhhhhHHHHHHHHhhh
Q 011118 174 DLTCKLLAPAITGFIISFVS 193 (493)
Q Consensus 174 Dl~~~l~gP~~~G~l~~~~s 193 (493)
-.+..+++|.+++.++...|
T Consensus 300 ~~iG~ila~~la~~il~~~G 319 (742)
T TIGR01299 300 WMIGGIYAAAMAWAIIPHYG 319 (742)
T ss_pred HHHHHHHHHHHHHHHHHhcc
Confidence 77888888888877765443
No 83
>PF11700 ATG22: Vacuole effluxer Atg22 like; InterPro: IPR024671 Autophagy is a major survival mechanism in which eukaryotes recycle cellular nutrients during stress conditions. Atg22, Avt3 and Avt4 are partially redundant vacuolar effluxers, which mediate the efflux of leucine and other amino acids resulting from autophagy []. This family also includes other transporter proteins.
Probab=98.95 E-value=2.5e-06 Score=92.32 Aligned_cols=164 Identities=15% Similarity=0.098 Sum_probs=106.1
Q ss_pred eecccchHHHHHHHHHHH-HhhhhhhHHHHHHH-HcCCCchHHHHHHHHHHHHHHHHHHHHHHHHhhhchh--hhhHHHH
Q 011118 290 YLKQEVVLPGVSLALLFF-TVLSFGTLMTATLE-WEGIPAYIIGIARGISATIGIAATILYPILQSRISTL--RTGLWSI 365 (493)
Q Consensus 290 y~~q~v~la~~alalLy~-tVL~f~~l~~~yl~-~~gls~~~iG~~r~~~av~GllgT~~~~~l~~riGl~--r~g~~~~ 365 (493)
..++|...--+.--++|. -+-....+...|.+ ..|++..++..+.-+..+.++.|+++++++.||+|.. |+....+
T Consensus 277 ~~~~~~~~~fLia~~l~~dg~~ti~~~~~i~a~~~lg~s~~~l~~~~l~~~i~a~~Ga~~~g~l~~r~g~k~~~~l~~~l 356 (477)
T PF11700_consen 277 IRKLRQLFLFLIAYFLYSDGVNTIISFAGIYATEVLGMSTTQLIVFGLVVQIVAIIGALLFGWLQDRFGPKTKRTLLISL 356 (477)
T ss_pred HHhChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCchhHHHHHHH
Confidence 334453333222234443 23345567888999 5999999999999999999999999999999999998 7766666
Q ss_pred HHHHHHHHHHHHHHhh----cchHHHHH--HHHHHHHhhhchhhhhhhhhhhhhhccCCCCcchhHHHHHHHHHHhh-HH
Q 011118 366 WSQWFCLLICVASIWI----HNSLVAAY--MLMVGVATSRLGLWMFDLSVIQQMQDLVPESDRCVVGGVQNSLQSTM-DL 438 (493)
Q Consensus 366 ~~q~~~L~~~v~~~~~----~~~~~s~~--~l~~gi~~SR~GLw~fDl~~~~l~Qe~vp~~~rG~v~gv~~sl~~~f-~l 438 (493)
..=.++...+...++. ..+.+..+ .++.|.+ .-..--...+++-+.+|+++.+..+|...-..... =+
T Consensus 357 ~~~~~i~~~g~~G~~~~~~g~~~~~~f~~~a~~~G~~-----~G~~qs~sRs~~~~LiP~g~e~efFgly~i~gk~ss~l 431 (477)
T PF11700_consen 357 ILWIIIPLYGLFGFWPSFFGLKSPWEFWVLAVLIGLF-----MGGIQSASRSLFSRLIPPGREAEFFGLYAITGKASSWL 431 (477)
T ss_pred HHHHHHHHHHHHHhhhcccCcccHHHHHHHHHHHHHH-----hhhHHHHHHHHHHHhCCCchhhHHHHHHHHHHHHHHHH
Confidence 4211111111121111 11222222 2223332 12224555788999999999999999999988888 67
Q ss_pred HHHHHHHhccCCCCchHHHH
Q 011118 439 MAYTMGIIISNPQDFWKLIL 458 (493)
Q Consensus 439 ~~~~~~ii~~~p~~F~~l~~ 458 (493)
+.++.+.+....++-.+-..
T Consensus 432 GPll~g~i~~~tg~~r~g~~ 451 (477)
T PF11700_consen 432 GPLLFGLITDATGSQRYGFL 451 (477)
T ss_pred HHHHHHHHHHHhCCchhHHH
Confidence 77888888777764444433
No 84
>COG0738 FucP Fucose permease [Carbohydrate transport and metabolism]
Probab=98.91 E-value=7.4e-06 Score=85.47 Aligned_cols=394 Identities=12% Similarity=0.126 Sum_probs=224.7
Q ss_pred cchhhHHHHHHHHHHHHHhhHHHHHHHHHHHHHhCCCchHHHHHHHHHHHHHHHhhhccceeeecccchhHHHHHHHHHH
Q 011118 14 ITSFLTTYLYVAHFLARWGARMWEFSVGLYMISVWPDSLLFAAIYGAVESASIALFGPIVGHWVDKLTYVKVLQIWLVTQ 93 (493)
Q Consensus 14 ~~~~~~~~L~~s~~lS~~Gdr~~~Fa~~L~lv~l~~~sll~~sv~gl~~~l~~llfg~~vG~~vDr~~R~~v~~~~~~~q 93 (493)
-++-.+..++.=-++--+.+.+-+--+|- +.+.++-|....+..+++...+..+.+.+.|..++|.++|+.+.....+=
T Consensus 10 ~~~~~~v~~t~lFfl~G~~~~l~diLip~-l~~~f~ls~~~a~liqfaff~gYf~~~lpa~~~~kk~gyk~gi~lgL~l~ 88 (422)
T COG0738 10 SVKLAFVLLTSLFFLWGFITCLNDILIPH-LKEVFDLTYFEASLIQFAFFGGYFIMSLPAGLLIKKLGYKAGIVLGLLLY 88 (422)
T ss_pred CceeHHHHHHHHHHHHHHHhhcchhhHHH-HHHHhCccHHHHHHHHHHHHHHHHHHhccHHHHHHHhhhHHHHHHHHHHH
Confidence 34434555666666666667777778888 67889999999999999999999999999999999999999988776222
Q ss_pred HHHHHHHHHHHHHHHhhcccccchhHHHH-HHHHHHHHHHHHHHhhhhhhhhhhccceEEEecCCCChhhhhhhhhHHHh
Q 011118 94 NLSFIVAGVSVITLLFFSSLKSTNFIAFV-LLVILTNISGAVGVISTLAGTILIEREWVVVISEGHPPEALTKMNSIIRR 172 (493)
Q Consensus 94 ~~~v~~s~~~~~~~l~~~~~~~~~~~~~~-~l~~~~~~~g~~~~l~~~a~~iaieRDWvv~i~~~~~~~~L~~~Na~mrr 172 (493)
++.|.++ .| .+...++..|. .+++++.-.++.+.=+++- +..+ ++++ .+=.|+| .++.
T Consensus 89 ----avg~~lF----~p-Aa~~~~y~~FL~~lFila~Gi~~LetaaNp~---------v~~l-g~~~-~a~~rln-l~q~ 147 (422)
T COG0738 89 ----AVGAALF----WP-AASSKSYGFFLVALFILASGIGLLETAANPY---------VTLL-GKPE-SAAFRLN-LAQA 147 (422)
T ss_pred ----HHHHHHH----hh-hhhhhhHHHHHHHHHHHHhhhHHHHhccchH---------HHHh-CCch-hHHHHHH-HHHH
Confidence 3333332 22 22333443333 3454444444444444433 2333 3322 2333444 5677
Q ss_pred HHHHHHhhhhHHHHHHHHh-----hh------hHHH--HHHHHHHHHHHHHHHHHHHHHHHhhcCcchhhhhhhhccCCC
Q 011118 173 IDLTCKLLAPAITGFIISF-----VS------LQAS--AMTLAIWTTVTVWVEYWLFMSVYKGIPALAESSQRRIRRSMP 239 (493)
Q Consensus 173 iDl~~~l~gP~~~G~l~~~-----~s------~~~a--~~~i~~~n~~S~~ve~~~l~~Vy~~~p~L~~~~~~~~~~~~~ 239 (493)
-.-...++||.+++.++-. .+ .+.. ..+-.-.=..+.+.=.+.+...+.|.|+.++.
T Consensus 148 fn~lGa~~gp~~g~~lils~~~~~~~~~~~~~~~~~~~~~v~~pYl~~~~~lvll~v~~~~~k~p~~~~~---------- 217 (422)
T COG0738 148 FNGLGAILGPLLGSSLILSGVALTMSAAQILAIKGADASSVQFPYLILAGLLVLLAVLILLSKLPDLQVA---------- 217 (422)
T ss_pred hhhhHHHHHHHHHHHHHHhhhhhccCHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHhccCCcCCcc----------
Confidence 7888999999999999872 11 1110 00000111112222223333444455654311
Q ss_pred cccccccCCccccccccccccchhHHHHHHHHHHHHhhhccccccccceeeecccchHHHHHHHHHHHHh-hhhhhHHHH
Q 011118 240 IDMEQSTSMPRERESLLSHDENNAELAEKRWRWKIIDWISNAPCVGAWQVYLKQEVVLPGVSLALLFFTV-LSFGTLMTA 318 (493)
Q Consensus 240 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~y~~q~v~la~~alalLy~tV-L~f~~l~~~ 318 (493)
++ +. .+. + ..+...-+|||-++.+...-++|--+ ...++.++.
T Consensus 218 ---~~--~~------------~~~---~----------------~~~~~~l~~~~~~~~gvl~~FlYVG~Eva~gsfl~~ 261 (422)
T COG0738 218 ---AP--SL------------GAS---G----------------SAGLSSLFQNKHLRLGVLAIFLYVGAEVAIGSFLVS 261 (422)
T ss_pred ---cc--cc------------ccc---c----------------cchHHHHHhChHHHHHHHHHHHHHhHHHHHHHHHHH
Confidence 00 00 000 0 01233446888999888888999655 578889999
Q ss_pred HHHH-cCCCchHHHHHHHHHHHHHHHHHHHHHHHHhhhchhhhhHHHHHHHHHHHHHHHHHHhhcchHHHHHHHHHHHHh
Q 011118 319 TLEW-EGIPAYIIGIARGISATIGIAATILYPILQSRISTLRTGLWSIWSQWFCLLICVASIWIHNSLVAAYMLMVGVAT 397 (493)
Q Consensus 319 yl~~-~gls~~~iG~~r~~~av~GllgT~~~~~l~~riGl~r~g~~~~~~q~~~L~~~v~~~~~~~~~~s~~~l~~gi~~ 397 (493)
|+.+ +|+++.+-+.+.+.-=++-.+|=++..++++|+...|.-.+.-. +-...|....++++-..-..+++.|...
T Consensus 262 y~~~~~g~~~~~aa~~~s~~~~~~~vGRFig~~lm~~~~~~k~Laf~a~---~~ill~~~~~l~~g~v~~~~l~~ig~F~ 338 (422)
T COG0738 262 YLEELLGLNEQQAAYYLSFFWVGFMVGRFIGSALMSRIKPEKYLAFYAL---IAILLLLAVALIGGVVALYALFLIGLFN 338 (422)
T ss_pred HHHhcCCccHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCHHHHHHHHHH---HHHHHHHHHHHhcChHHHHHHHHHHHHh
Confidence 9997 99999988888888777788999999999999999987664442 2233344445555433333455666665
Q ss_pred hhchhhhhhhhhhhhhhccCCCCcchhHHHHHHHHHHhhHHHHHHHHHhccCCCCchHHHHHHHHHHHHHHHHHHHHHHH
Q 011118 398 SRLGLWMFDLSVIQQMQDLVPESDRCVVGGVQNSLQSTMDLMAYTMGIIISNPQDFWKLILISVIVVTLAAILYTFHLYR 477 (493)
Q Consensus 398 SR~GLw~fDl~~~~l~Qe~vp~~~rG~v~gv~~sl~~~f~l~~~~~~ii~~~p~~F~~l~~~S~~~V~~~~~l~~~~~~~ 477 (493)
|-..=..|-++...+- ++.+. .++....-.-+--+..++.|.+...-+.-..-.+....+...- ..|..+-.+
T Consensus 339 simfPTIfslal~~l~----~~ts~--~s~~l~maivGGAiiP~l~G~i~d~~g~~~~~~~~pllc~lyV-~~~~~~~~~ 411 (422)
T COG0738 339 SIMFPTIFSLALKNLG----EHTSV--GSGLLVMAIVGGAIIPPLQGVIADMFGIQLTFLIVPLLCYLYV-LFFALIGKK 411 (422)
T ss_pred HHHHHHHHHHHHhccC----ccccc--cceeeeeheecchHHHHHHHHHHHhhhhHHHHHHHHHHHHHHH-HHHHHHhcc
Confidence 6554455555543332 22222 2222222222224455555655533222222112333333322 233333334
Q ss_pred hhcCCCCh
Q 011118 478 IRKHLFHF 485 (493)
Q Consensus 478 ~Rghl~h~ 485 (493)
.|||+-|=
T Consensus 412 ~k~~~~~~ 419 (422)
T COG0738 412 SKGRLSAE 419 (422)
T ss_pred cccchhhh
Confidence 78887664
No 85
>PRK11462 putative transporter; Provisional
Probab=98.87 E-value=8.2e-06 Score=87.74 Aligned_cols=328 Identities=11% Similarity=0.033 Sum_probs=160.3
Q ss_pred HHHHHHHhCCCchHHHHHHHHHHHHHHHhhhccceeeeccc----chh-HHHHHHHHHHHHHHHHHHHHHHHHHhhcccc
Q 011118 40 VGLYMISVWPDSLLFAAIYGAVESASIALFGPIVGHWVDKL----TYV-KVLQIWLVTQNLSFIVAGVSVITLLFFSSLK 114 (493)
Q Consensus 40 ~~L~lv~l~~~sll~~sv~gl~~~l~~llfg~~vG~~vDr~----~R~-~v~~~~~~~q~~~v~~s~~~~~~~l~~~~~~ 114 (493)
+..|..+...=+...+|..-++.-+-=.+..|.+|.++||. +|+ +-+..+- +..++++.+ ++..| ...
T Consensus 32 l~~fyt~~~Gl~~~~~g~i~~~~ri~Dai~Dp~~G~~~D~t~~r~Gr~rp~il~g~----i~~~i~~~l--lf~~p-~~s 104 (460)
T PRK11462 32 MMFFYTDIFGIPAGFVGTMFLVARALDAISDPCMGLLADRTRSRWGKFRPWVLFGA----LPFGIVCVL--AYSTP-DLS 104 (460)
T ss_pred HHHHHHHhhCCCHHHHHHHHHHHHHHHHHHhhhheehhccCCCCCCCcchhHhHHH----HHHHHHHHH--HHhCC-CCC
Confidence 34444455554666666666666677778899999999985 344 4443332 222323221 21222 211
Q ss_pred cch-hHHHHHHHHHHHHHHHHHHhhhhhhhhhhccceEEEecCCCChhhhhhhhhHHHhHHHHHHhhhhHHHHHHHHhhh
Q 011118 115 STN-FIAFVLLVILTNISGAVGVISTLAGTILIEREWVVVISEGHPPEALTKMNSIIRRIDLTCKLLAPAITGFIISFVS 193 (493)
Q Consensus 115 ~~~-~~~~~~l~~~~~~~g~~~~l~~~a~~iaieRDWvv~i~~~~~~~~L~~~Na~mrriDl~~~l~gP~~~G~l~~~~s 193 (493)
... ..++...++ +....-.+.++- +.+ |.+.++++ . ++.+++++.-.-...+..+++|++...+.+..|
T Consensus 105 ~~~~~~y~~~~~~---~~~~~~t~~~ip-y~a----l~~~lt~d-~-~eRt~l~s~r~~~~~iG~~~~~~~~~plv~~~g 174 (460)
T PRK11462 105 MNGKMIYAAITYT---LLTLLYTVVNIP-YCA----LGGVITND-P-TQRISLQSWRFVLATAGGMLSTVLMMPLVNLIG 174 (460)
T ss_pred cchHHHHHHHHHH---HHHHHHHHHhcc-HHH----HHHHhcCC-H-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhC
Confidence 111 222222221 222333344433 222 36777665 3 678889887777777777788888777766543
Q ss_pred -------hHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCcchhhhhhhhccCCCcccccccCCccccccccccccchhHHH
Q 011118 194 -------LQASAMTLAIWTTVTVWVEYWLFMSVYKGIPALAESSQRRIRRSMPIDMEQSTSMPRERESLLSHDENNAELA 266 (493)
Q Consensus 194 -------~~~a~~~i~~~n~~S~~ve~~~l~~Vy~~~p~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 266 (493)
+.....++++.-.+..++ +.. ..+|..+ + + ++ ..+
T Consensus 175 ~~~~~~g~~~~~~i~~ii~~i~~~i---~~~----~~kE~~~----------~-~-~~----------------~~~--- 216 (460)
T PRK11462 175 GDNKPLGFQGGIAVLSVVAFMMLAF---CFF----TTKERVE----------A-P-PT----------------TTS--- 216 (460)
T ss_pred CCchhhhHHHHHHHHHHHHHHHHHH---HHh----cceeccC----------C-C-cc----------------CCC---
Confidence 233332222222222221 111 1222110 0 0 00 000
Q ss_pred HHHHHHHHHhhhccccccccceeeecccchHHHHHHHHHHHHh-hhhhhHHHHHHHH-cCCCchHHHHHHHHHHHHHHHH
Q 011118 267 EKRWRWKIIDWISNAPCVGAWQVYLKQEVVLPGVSLALLFFTV-LSFGTLMTATLEW-EGIPAYIIGIARGISATIGIAA 344 (493)
Q Consensus 267 ~~~~~~~~~~~l~~~~~~~g~~~y~~q~v~la~~alalLy~tV-L~f~~l~~~yl~~-~gls~~~iG~~r~~~av~Gllg 344 (493)
+++..+..++++.++..+...++++.- ..+.+.++-|.+. .|. +...+.+.+...+.+++|
T Consensus 217 ----------------~~~~l~~~~~Nk~~~~l~~~~~~~~~~~~~~~~~~~y~~~y~~g~-~~~~~~~l~~~~i~~iig 279 (460)
T PRK11462 217 ----------------MREDLRDIWQNDQWRIVGLLTIFNILAVCVRGGAMMYYVTWILGT-PEVFVAFLTTYCVGNLIG 279 (460)
T ss_pred ----------------HHHHHHHHhCChHHHHHHHHHHHHHHHHHHHHhHhhhhhhhhcCC-hHHHHHHHHHHHHHHHHH
Confidence 112223335677777665555555332 2244555555554 453 445677788888899999
Q ss_pred HHHHHHHHhhhchhhhhHHHHHHHHHHHHHHHHHHhhcchHHHHHHHHHHHHhhhchhhhhhhhhhhhhhccCCC-----
Q 011118 345 TILYPILQSRISTLRTGLWSIWSQWFCLLICVASIWIHNSLVAAYMLMVGVATSRLGLWMFDLSVIQQMQDLVPE----- 419 (493)
Q Consensus 345 T~~~~~l~~riGl~r~g~~~~~~q~~~L~~~v~~~~~~~~~~s~~~l~~gi~~SR~GLw~fDl~~~~l~Qe~vp~----- 419 (493)
+.+.+++.+|+|-.+...+... .....++..++.+..... .+....++..+|.-.+......++.+.++.
T Consensus 280 ~~l~~~l~~r~gkk~~~~~~~~---~~~~~~~~~~~~~~~~~~--~~~~~~~l~g~~~~~~~~l~~~m~ad~~d~~e~~t 354 (460)
T PRK11462 280 SALAKPLTDWKCKVTIFWWTNA---LLAVISLAMFFVPMQASI--TMFVFIFVIGVLHQLVTPIQWVMMSDTVDYGEWCN 354 (460)
T ss_pred HHHHHHHHHHhChHHHHHHHHH---HHHHHHHHHHHhchhHHH--HHHHHHHHHHHHHHHHHHHHHHHHHHhHhhhHHhc
Confidence 9999999999996655443332 111112222223221111 111122223334334455555666666663
Q ss_pred --CcchhHHHHHHHHHHhh-HHHHHHHH
Q 011118 420 --SDRCVVGGVQNSLQSTM-DLMAYTMG 444 (493)
Q Consensus 420 --~~rG~v~gv~~sl~~~f-~l~~~~~~ 444 (493)
+.-|...+.....+.+. -++..+.+
T Consensus 355 G~r~~g~~~a~~~f~~Klg~alg~~i~g 382 (460)
T PRK11462 355 GKRLTGISFAGTLFVLKLGLAFGGALIG 382 (460)
T ss_pred CCCchHHHHHHHHHHHHHHHHHHHHHHH
Confidence 22355455555445444 44444444
No 86
>KOG2615 consensus Permease of the major facilitator superfamily [General function prediction only]
Probab=98.80 E-value=4.3e-07 Score=93.80 Aligned_cols=350 Identities=18% Similarity=0.196 Sum_probs=175.3
Q ss_pred HHHHHHHHHHHHh-CCC--chHHHHHHHHHHHHHHHhhhccceeeecccchhHHHHHHHHHHHHHHHHHHHHHHHHHhhc
Q 011118 35 MWEFSVGLYMISV-WPD--SLLFAAIYGAVESASIALFGPIVGHWVDKLTYVKVLQIWLVTQNLSFIVAGVSVITLLFFS 111 (493)
Q Consensus 35 ~~~Fa~~L~lv~l-~~~--sll~~sv~gl~~~l~~llfg~~vG~~vDr~~R~~v~~~~~~~q~~~v~~s~~~~~~~l~~~ 111 (493)
.|.+.+-.|.+.. -|+ +-+..+..|-+-++-+.+-+|..|.|.||++||+++.++.+. ++++..+ .. .
T Consensus 47 ~~~~~V~~F~~a~~~~~~~~~~yaGflGSsF~ilQ~~sS~~~G~~SD~yGRkpvll~c~~~----va~s~ll-~~-~--- 117 (451)
T KOG2615|consen 47 FVVFMVRDFNIAIGEPDGASVFYAGFLGSSFSILQFISSPLWGCLSDRYGRKPVLLACLIG----VALSYLL-WA-L--- 117 (451)
T ss_pred HHHHhhHHHHHhhCCcccccchhhhhHhhHHHHHHHHhhhhhhhhhhhhCchHHHHHHHHH----HHHHHHH-HH-H---
Confidence 4444555544433 344 888999999999999999999999999999999999888633 3332221 11 0
Q ss_pred ccccchhHHHHHHHHHHHHHHHHHHhhhhhhhhhhccceEEEecCCCChhhhhhhhhHHHhHHHHHHhhhhHHHHHHHHh
Q 011118 112 SLKSTNFIAFVLLVILTNISGAVGVISTLAGTILIEREWVVVISEGHPPEALTKMNSIIRRIDLTCKLLAPAITGFIISF 191 (493)
Q Consensus 112 ~~~~~~~~~~~~l~~~~~~~g~~~~l~~~a~~iaieRDWvv~i~~~~~~~~L~~~Na~mrriDl~~~l~gP~~~G~l~~~ 191 (493)
.. .|.+.++.=.+.|+....-++...+. -.++.+ +.-...=+.+..--.+.-++||+++|.+.++
T Consensus 118 ---S~---~F~afv~aR~l~Gi~kgnl~v~rAii------sdV~se---k~r~l~ms~v~~a~~lGfilGPmIGgyla~f 182 (451)
T KOG2615|consen 118 ---SR---NFAAFVLARFLGGIFKGNLSVIRAII------SDVVSE---KYRPLGMSLVGTAFGLGFILGPMIGGYLAQF 182 (451)
T ss_pred ---HH---HHHHHHHHHHhhhhccCchHHHHHHH------HhhcCh---hhccceeeeeehhhhcchhhcchhhhHHHhh
Confidence 11 23222211122344433333333222 222221 2334444555566689999999999999883
Q ss_pred h----hhHHH--HHHHHHHHHHHHHHHHHHHHHHHhhcCc-chhhhhhhhccCCCcccccccCCccccccccccccchhH
Q 011118 192 V----SLQAS--AMTLAIWTTVTVWVEYWLFMSVYKGIPA-LAESSQRRIRRSMPIDMEQSTSMPRERESLLSHDENNAE 264 (493)
Q Consensus 192 ~----s~~~a--~~~i~~~n~~S~~ve~~~l~~Vy~~~p~-L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 264 (493)
- +++.+ ++++.+.++.-...-.+ +.|| |+. +|++ ++.++ ..+. .+++.+..
T Consensus 183 ~~~~g~~p~alP~~~v~i~a~~~v~~~~~-------~lpETL~~-rk~~-~~~~~--~~~~-----------~~~~~~~~ 240 (451)
T KOG2615|consen 183 SSISGSYPFALPCLLVFILAAGDVTFFPW-------FLPETLPL-RKRN-DEHST--LQEA-----------ADDRLALL 240 (451)
T ss_pred HhhhccCchHHHHHHHHHHHHHHHHHHHH-------hCCccccc-hhhc-ccccc--hhhh-----------hhhhhhhc
Confidence 3 12232 23333333331211111 2343 221 2222 11000 0000 00000000
Q ss_pred HHHHHHHHHHHhhhccccccccceeeeccc--chHHHHHHH-HHHHHhhh-hhhHHHHHHH--HcCCCchHHHHHHHHHH
Q 011118 265 LAEKRWRWKIIDWISNAPCVGAWQVYLKQE--VVLPGVSLA-LLFFTVLS-FGTLMTATLE--WEGIPAYIIGIARGISA 338 (493)
Q Consensus 265 ~~~~~~~~~~~~~l~~~~~~~g~~~y~~q~--v~la~~ala-lLy~tVL~-f~~l~~~yl~--~~gls~~~iG~~r~~~a 338 (493)
+.+ +..+ ..-.|.+-.+. ...-.+++- ++|+.+++ +.+ ...++. .-|+++.+.|-+....+
T Consensus 241 ~~~--~~~~----------v~~lrn~p~~~~i~~~~i~~l~~~ly~~l~s~~~~-t~~~l~~~rfg~ss~~~G~vl~~tG 307 (451)
T KOG2615|consen 241 KFA--RIFK----------VAALRNPPLLDFISVLRIFGLHYFLYLELFSGLEN-TVLFLTHGRFGYSSMQQGKVLSTTG 307 (451)
T ss_pred chh--hhhh----------hhhhcCccccchHHHHHHHHHHHHHHHHHHHHHHh-hHHHhhcCccCCChhhheeeeehhh
Confidence 000 0111 01111121111 122233333 55555543 333 333443 36889999999998866
Q ss_pred HHHH-HHHHHHHHHHhhhchhhhhHHHHHHHHHHHHHHHHHH-hhcchH-H--HHHHHHHHHHhhhchhhhhhhhhhhhh
Q 011118 339 TIGI-AATILYPILQSRISTLRTGLWSIWSQWFCLLICVASI-WIHNSL-V--AAYMLMVGVATSRLGLWMFDLSVIQQM 413 (493)
Q Consensus 339 v~Gl-lgT~~~~~l~~riGl~r~g~~~~~~q~~~L~~~v~~~-~~~~~~-~--s~~~l~~gi~~SR~GLw~fDl~~~~l~ 413 (493)
++++ ..-.++|++.+..|...+-+.-.. .+..+..+.+ +.+.+. . ...+.-..-+.- --|.+.++
T Consensus 308 l~m~~~ql~~~~~l~~~~~~~~a~l~~~l---~~~vP~~llls~~~~~~~l~~~s~l~sf~~A~~-------vt~Lt~Lv 377 (451)
T KOG2615|consen 308 LLMLVIQLALVPILPRYKGNIKAVLLFSL---LLIVPAFLLLSLARTPVVLYLGSTLKSFSTASV-------VTCLTSLV 377 (451)
T ss_pred HHHHHHHHhccccccccccchhhHHHHHH---HHHHHHHHHHhccccchhhhHHHHHHHHHHHHh-------hHHHHHHH
Confidence 6665 455667777776666444433222 2333333322 222221 1 111111111111 12334444
Q ss_pred hccCCCCcchhHHHHHHHHHHhh-HHHHHHHHHhccCCCCc
Q 011118 414 QDLVPESDRCVVGGVQNSLQSTM-DLMAYTMGIIISNPQDF 453 (493)
Q Consensus 414 Qe~vp~~~rG~v~gv~~sl~~~f-~l~~~~~~ii~~~p~~F 453 (493)
-...|+++||.++|+.+|+..++ -++-.+.|.++.+-+.-
T Consensus 378 ~~~~~~~qrG~~~Gi~~Sl~alaRaiGPlv~g~i~~Ws~~~ 418 (451)
T KOG2615|consen 378 HKYGPQSQRGTLNGIFRSLGALARAIGPLVSGVIFSWSQGA 418 (451)
T ss_pred HhcCCcccchHHHHHHHHHHHHHHHhhhhhhheeEEEecCC
Confidence 55669999999999999999999 77777777777764433
No 87
>COG2271 UhpC Sugar phosphate permease [Carbohydrate transport and metabolism]
Probab=98.75 E-value=1.3e-05 Score=84.11 Aligned_cols=396 Identities=13% Similarity=0.132 Sum_probs=234.6
Q ss_pred HHHHHHHHHHHHHhhHHHHHHHHHHHHHhCCCchHHHHHHHHHHHHHHHhhhccceeeecccchhHHHHHHHHHHHHHHH
Q 011118 19 TTYLYVAHFLARWGARMWEFSVGLYMISVWPDSLLFAAIYGAVESASIALFGPIVGHWVDKLTYVKVLQIWLVTQNLSFI 98 (493)
Q Consensus 19 ~~~L~~s~~lS~~Gdr~~~Fa~~L~lv~l~~~sll~~sv~gl~~~l~~llfg~~vG~~vDr~~R~~v~~~~~~~q~~~v~ 98 (493)
+.-.+.++..=-+--.-+++|.|-++.+. .-|.-..++.+..-++..=+-=-..|.+.||.+-|+.|-..++.-.+.
T Consensus 31 f~~~fiGYa~fYl~RknF~~a~p~l~e~~-~lsk~~lG~i~s~f~i~YG~sKf~~G~~sDr~npr~fm~~gLilsai~-- 107 (448)
T COG2271 31 FLSIFIGYAAFYLTRKNFNLAMPALIEDG-GLSKTQLGILGSAFSITYGVSKFVMGVLSDRSNPRYFMAFGLILSAIV-- 107 (448)
T ss_pred HHHHHHHHHHHHHHHHhHhhccHHHHHhc-CCCHHHHHHHHHHHHHHHHHHHHHhhhhcccCCCceeehHHHHHHHHH--
Confidence 44466677777777888999999965554 356778888888888877777778899999998888877666322222
Q ss_pred HHHHHHHHHHhhcccccchhHHHHHHHHHHHHHHHHHHhhhhhhhhhhccceEEEecCCCChhhhhhhhhHHHhHHHHHH
Q 011118 99 VAGVSVITLLFFSSLKSTNFIAFVLLVILTNISGAVGVISTLAGTILIEREWVVVISEGHPPEALTKMNSIIRRIDLTCK 178 (493)
Q Consensus 99 ~s~~~~~~~l~~~~~~~~~~~~~~~l~~~~~~~g~~~~l~~~a~~iaieRDWvv~i~~~~~~~~L~~~Na~mrriDl~~~ 178 (493)
+ +++-.. .+...+.++. .+.|.....-.+.....+.. |-+ +++|-....-=|. .-.+.-
T Consensus 108 --n---il~Gfs-----~s~~~~~~l~---~lng~fQg~Gwpp~~~~i~~-Wfs---r~eRG~~~siWn~----shNiGG 166 (448)
T COG2271 108 --N---ILFGFS-----PSLFLFAVLW---VLNGWFQGMGWPPCARTITH-WFS---RKERGTWWSIWNT----SHNIGG 166 (448)
T ss_pred --H---HHHhhh-----hHHHHHHHHH---HHHHHHhcCCCcHHHHHHHH-HcC---ccccCceEEEehh----hhhccc
Confidence 1 111111 1222332222 23455555555555544433 331 2222111222222 234555
Q ss_pred hhhhHHH--HHHHHhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCcchhhhhhhhccCCCcccccccCCcccccccc
Q 011118 179 LLAPAIT--GFIISFVSLQASAMTLAIWTTVTVWVEYWLFMSVYKGIPALAESSQRRIRRSMPIDMEQSTSMPRERESLL 256 (493)
Q Consensus 179 l~gP~~~--G~l~~~~s~~~a~~~i~~~n~~S~~ve~~~l~~Vy~~~p~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 256 (493)
-+.|.++ |.+....+.+.+..+ =-.++.++..+++.+..++-.+..-++-++. ++||.+.++
T Consensus 167 al~~~~~~la~~~~~~~w~~~f~~---pgiiaiival~~~~~~rd~Pqs~GLP~ie~~-~~d~~e~~~------------ 230 (448)
T COG2271 167 ALAPLVALLAFFAFHGGWRAAFYF---PGIIAIIVALILLFLLRDRPQSEGLPPIEEY-RGDPLEIYE------------ 230 (448)
T ss_pred chHHHHHHHHHHHhccchhHHHHH---HHHHHHHHHHHHHHHhCCCccccCCCCHHHh-hcCchhhhh------------
Confidence 5666666 777665566655543 2345666777777766443222211111110 101111000
Q ss_pred ccccchhHHHHHHHHHHHHhhhccccccccceeeeccc-chHHHHHHHHHHHHhhhhhhHHHHHHHH-cCCCchHHHHHH
Q 011118 257 SHDENNAELAEKRWRWKIIDWISNAPCVGAWQVYLKQE-VVLPGVSLALLFFTVLSFGTLMTATLEW-EGIPAYIIGIAR 334 (493)
Q Consensus 257 ~~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~y~~q~-v~la~~alalLy~tVL~f~~l~~~yl~~-~gls~~~iG~~r 334 (493)
++++++.. + .++ .=++++++|| ++..+++..++|+-=.+...=...|+++ +|++...-+..-
T Consensus 231 ~~~~~~~l----s-~~~-----------i~~~YVL~Nk~iW~la~a~vfvYivR~gi~dW~p~YL~e~k~~s~~~a~~a~ 294 (448)
T COG2271 231 EEKENEGL----T-AWQ-----------IFVKYVLKNKLIWLLALANVFVYVVRYGINDWGPLYLSEVKGFSLVKANWAI 294 (448)
T ss_pred hhccCCCc----c-HHH-----------HHHHHHHcChHHHHHHHHHHHHHHHHHHHhhhHHHHHHHhcCCCHHHHHHHH
Confidence 00000000 0 011 1135568898 6777788889998767777888999996 999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHhhhchhhhhHHHHHHHHHHHHHHHHHHhhcchH----HHHHHHHHHHHhhhchhhhhhhhhh
Q 011118 335 GISATIGIAATILYPILQSRISTLRTGLWSIWSQWFCLLICVASIWIHNSL----VAAYMLMVGVATSRLGLWMFDLSVI 410 (493)
Q Consensus 335 ~~~av~GllgT~~~~~l~~riGl~r~g~~~~~~q~~~L~~~v~~~~~~~~~----~s~~~l~~gi~~SR~GLw~fDl~~~ 410 (493)
+.==++|+.||++.+++..|+--.|-+.-.+.. .+.+..|++..|..+.. ..+.++.+|.. +++=++-.-
T Consensus 295 ~lfE~agl~G~Ll~GwlSDklfkgrR~p~~~i~-~~~i~~~~~~~w~~~~~~~~l~~~~l~~iGf~-----IyGPqmLiG 368 (448)
T COG2271 295 SLFEVAGLPGTLLAGWLSDKLFKGRRGPMALIF-MLLITASLVLYWLAPNGSYLLDAILLFIIGFL-----IYGPQMLIG 368 (448)
T ss_pred HHHHHHhhHHHHHHHHHHHHhcccccchHHHHH-HHHHHHHHHHHHcCCCccHHHHHHHHHHHHHH-----HhhHHHHHH
Confidence 999999999999999999999866666555532 12345566666753221 12333333332 122222222
Q ss_pred hhhhccCCCCcchhHHHHHHHHHHhh--HHHHHHHHHhccCCCCchHHHHHHHHHHHHHHHHHHHHHH
Q 011118 411 QQMQDLVPESDRCVVGGVQNSLQSTM--DLMAYTMGIIISNPQDFWKLILISVIVVTLAAILYTFHLY 476 (493)
Q Consensus 411 ~l~Qe~vp~~~rG~v~gv~~sl~~~f--~l~~~~~~ii~~~p~~F~~l~~~S~~~V~~~~~l~~~~~~ 476 (493)
-.-=|.+|.+--|..+|.-....+++ .+..+.++.+...-+=.+.-++.+++++++..++...+.+
T Consensus 369 l~a~e~~pK~AaGtA~Gf~Glf~Yl~Ga~~a~~~~g~i~d~~gW~g~Fi~~~~~a~l~~lll~~~~~~ 436 (448)
T COG2271 369 LAAAEFVPKKAAGTATGFVGLFAYLIGAALAGLPLGYIADTWGWDGGFIVLSIAALLAILLLLPVWNA 436 (448)
T ss_pred HHHhccccHhhccchhchhhhHHHHhhHHhcCCcceeeEecCCCcchHHHHHHHHHHHHHHHHHHHhh
Confidence 33347789999999999999998885 6777777777665344555667777777777777777744
No 88
>PRK09584 tppB putative tripeptide transporter permease; Reviewed
Probab=98.72 E-value=2.9e-05 Score=84.46 Aligned_cols=163 Identities=9% Similarity=-0.045 Sum_probs=90.8
Q ss_pred hhHHHHHHHHHHHHHhhHHHHHHHHHHHHHhCCCchHHHHHHHHHHHHHHHhhhccceeeecc-cchhHHHHHHHHHHHH
Q 011118 17 FLTTYLYVAHFLARWGARMWEFSVGLYMISVWPDSLLFAAIYGAVESASIALFGPIVGHWVDK-LTYVKVLQIWLVTQNL 95 (493)
Q Consensus 17 ~~~~~L~~s~~lS~~Gdr~~~Fa~~L~lv~l~~~sll~~sv~gl~~~l~~llfg~~vG~~vDr-~~R~~v~~~~~~~q~~ 95 (493)
+.++.++...++.+.+--.+..-.+.++.+-++-|....+.....-........+..|.+.|| .+||+++..+.+...+
T Consensus 21 ~~~~~~~~~~~~~~~~~y~~~~~l~~yl~~~lg~s~~~a~~~~~~~~~~~~~~~~~~G~LaDr~~G~r~~~~~g~~~~~i 100 (500)
T PRK09584 21 KAFYLIFSIELWERFGYYGLQGIMAVYLVKQLGMSEADSITLFSSFSALVYGLVAIGGWLGDKVLGTKRVIMLGAIVLAI 100 (500)
T ss_pred chHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhccchHHHHHHHHHHHHH
Confidence 367777777777777766666667777766655554443333322333334445678999999 5999998877644433
Q ss_pred HHHHHHHHHHHHHhhcccccchhHHHHHHHHHHHHHHHHHHhhhhhhhhhhccceEEEecCCCChhhhhhhhhHHHhHHH
Q 011118 96 SFIVAGVSVITLLFFSSLKSTNFIAFVLLVILTNISGAVGVISTLAGTILIEREWVVVISEGHPPEALTKMNSIIRRIDL 175 (493)
Q Consensus 96 ~v~~s~~~~~~~l~~~~~~~~~~~~~~~l~~~~~~~g~~~~l~~~a~~iaieRDWvv~i~~~~~~~~L~~~Na~mrriDl 175 (493)
. .. .+... . ..+..+.... .+.+....+..+. ..++-.||. ++++ ++..+.-+...-.-.
T Consensus 101 g----~~---l~~~~---~-~~~~~l~~~~---~l~gig~g~~~~~-~~~l~~~~f----~~~~-~~~~~~~~~~~~~~~ 160 (500)
T PRK09584 101 G----YA---LVAWS---G-HDAGIVYMGM---ATIAVGNGLFKAN-PSSLLSTCY----EKDD-PRLDGAFTMYYMSIN 160 (500)
T ss_pred H----HH---HHHHh---c-ccHHHHHHHH---HHHHHhhhcccCC-HHHHHHHhc----CCCc-hhhhhcchHHHHHHH
Confidence 2 11 11110 1 1111111111 1123333333322 223344554 2322 334444445556667
Q ss_pred HHHhhhhHHHHHHHHhhhhHHHHH
Q 011118 176 TCKLLAPAITGFIISFVSLQASAM 199 (493)
Q Consensus 176 ~~~l~gP~~~G~l~~~~s~~~a~~ 199 (493)
++..+||.++|.+.+..|++.+..
T Consensus 161 iG~~~gp~i~g~l~~~~g~~~~F~ 184 (500)
T PRK09584 161 IGSFFSMLATPWLAAKYGWSVAFA 184 (500)
T ss_pred HHHHHHHHHHHHHHHhhCHHHHHH
Confidence 889999999999999888776663
No 89
>TIGR00887 2A0109 phosphate:H+ symporter. This model represents the phosphate uptake symporter subfamily of the major facilitator superfamily (pfam00083).
Probab=98.66 E-value=0.00013 Score=79.08 Aligned_cols=152 Identities=13% Similarity=-0.008 Sum_probs=80.9
Q ss_pred HHHHHHHHHHhhHHHHHHHHHHHHHhCC----CchHHHHHHHHHHHHHHHhhhccceeeecccchhHHHHHHHHHHHHHH
Q 011118 22 LYVAHFLARWGARMWEFSVGLYMISVWP----DSLLFAAIYGAVESASIALFGPIVGHWVDKLTYVKVLQIWLVTQNLSF 97 (493)
Q Consensus 22 L~~s~~lS~~Gdr~~~Fa~~L~lv~l~~----~sll~~sv~gl~~~l~~llfg~~vG~~vDr~~R~~v~~~~~~~q~~~v 97 (493)
...++++--.......++.|.+--+.+. .+....+.....-.+..++..++.|.+.||++||+++..+.+.-.+..
T Consensus 21 ~~~~~~~~g~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ig~~ig~~~~g~l~d~~Grr~~~~~~~~~~~v~~ 100 (502)
T TIGR00887 21 AGVGFFTDSYDLFCISLVTKMLGYVYYHGKGPLPSSVSAAVNGSASIGTLAGQLFFGWLADKLGRKRVYGMELIIMIIAT 100 (502)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhccCcccchHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccHHHHHHHHHHHHHHH
Confidence 3344444444444555555653222211 122344667777778888999999999999999999877764444331
Q ss_pred HHHHHHHHHHHhhcccccchhHHHHHHHHHHHHHHHHHHhhhhhhhhhhccceEEEecCCCChhhhhhhhhHHHhHHHHH
Q 011118 98 IVAGVSVITLLFFSSLKSTNFIAFVLLVILTNISGAVGVISTLAGTILIEREWVVVISEGHPPEALTKMNSIIRRIDLTC 177 (493)
Q Consensus 98 ~~s~~~~~~~l~~~~~~~~~~~~~~~l~~~~~~~g~~~~l~~~a~~iaieRDWvv~i~~~~~~~~L~~~Na~mrriDl~~ 177 (493)
. +..+.+ .......+..+++.-.+.|.......+..... -.||. +. +...+..+.+.-.-...
T Consensus 101 ----~--~~~~~~---~~~~~~~~~~~~~~r~l~G~~~g~~~~~~~~~-~~e~~----p~---~~Rg~~~~~~~~~~~~g 163 (502)
T TIGR00887 101 ----V--ASGLSP---GSSPKSVMATLCFWRFWLGVGIGGDYPLSAII-TSEFA----TK---KWRGAMMAAVFAMQGFG 163 (502)
T ss_pred ----H--HHHHcc---CcccchHHHHHHHHHHHHHHHHhhhhHHHHHH-HHHhc----Ch---hhHHHHHHHHHHHHHHH
Confidence 1 111111 11111011111111122333333333332222 23444 22 34567778888778888
Q ss_pred HhhhhHHHHHHHH
Q 011118 178 KLLAPAITGFIIS 190 (493)
Q Consensus 178 ~l~gP~~~G~l~~ 190 (493)
.++||.+++.+..
T Consensus 164 ~~~g~~~~~~~~~ 176 (502)
T TIGR00887 164 ILAGAIVALIVLA 176 (502)
T ss_pred HHHHHHHHHHHHH
Confidence 8899988877643
No 90
>COG2211 MelB Na+/melibiose symporter and related transporters [Carbohydrate transport and metabolism]
Probab=98.66 E-value=2.2e-05 Score=84.09 Aligned_cols=342 Identities=14% Similarity=0.132 Sum_probs=193.1
Q ss_pred HHHHHHHhhHHHHHHHHHHHHHhCCCchHHHHHHHHHHHHHHHhhhccceeeecccchhH-----HHHHHHHHHHHHHHH
Q 011118 25 AHFLARWGARMWEFSVGLYMISVWPDSLLFAAIYGAVESASIALFGPIVGHWVDKLTYVK-----VLQIWLVTQNLSFIV 99 (493)
Q Consensus 25 s~~lS~~Gdr~~~Fa~~L~lv~l~~~sll~~sv~gl~~~l~~llfg~~vG~~vDr~~R~~-----v~~~~~~~q~~~v~~ 99 (493)
+.+-+...-.+-..-+.-|..+...=+...+|..=++.-+.-.+..|.+|..+||.++|. =+... .+..++
T Consensus 20 gd~~~~~~~~~~~~yLl~fYTdv~Gis~~~aG~iflv~RiiDAi~DP~~G~i~D~t~~r~GrfRP~lL~g----~ip~~i 95 (467)
T COG2211 20 GDFASNFAFGIVVLYLLFFYTDVFGLSAALAGTIFLVARIIDAITDPIMGFIVDRTRSRWGRFRPWLLWG----AIPFAI 95 (467)
T ss_pred hhhHHHHHHHHHHHHHHHHHhcccCCcHHHHHHHHHHHHHHHHHhcchheeeecccccccccccHHHHHH----hHHHHH
Confidence 333333333333333444555566667778888888888888899999999999876332 22222 223233
Q ss_pred HHHHHHHHHhhcccccchhHHHHHHHHHHHHHHHHHHhhhhhhhhhhccceEEEecCCCChhhhhhhhhHHHhHHHHHHh
Q 011118 100 AGVSVITLLFFSSLKSTNFIAFVLLVILTNISGAVGVISTLAGTILIEREWVVVISEGHPPEALTKMNSIIRRIDLTCKL 179 (493)
Q Consensus 100 s~~~~~~~l~~~~~~~~~~~~~~~l~~~~~~~g~~~~l~~~a~~iaieRDWvv~i~~~~~~~~L~~~Na~mrriDl~~~l 179 (493)
.+.+ .+..++.....++....+.+. +.+..-.+-++- +-+ |.++|+.+. ++.+++|+.=+-.-..+.+
T Consensus 96 ~~~l--~F~~p~~~~~~k~~ya~vtY~---l~~l~YT~vniP-y~a----l~~~iT~d~--~ER~~l~s~R~~~~~~g~~ 163 (467)
T COG2211 96 VAVL--LFITPDFSMTGKLIYALVTYM---LLGLGYTLVNIP-YGA----LGPEITQDP--QERASLTSWRMVFASLGGL 163 (467)
T ss_pred HHHH--HHcCCCcccCcchHHHHHHHH---HHHHHHHheeCc-hhh----cchhhcCCH--HHHHHHHHHHHHHHHHHHH
Confidence 3332 112222112223332222231 122222322222 222 378887753 6788888876665555555
Q ss_pred hhhHHHHHHHHhhh-------hHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCcchhhhhhhhccCCCcccccccCCcccc
Q 011118 180 LAPAITGFIISFVS-------LQASAMTLAIWTTVTVWVEYWLFMSVYKGIPALAESSQRRIRRSMPIDMEQSTSMPRER 252 (493)
Q Consensus 180 ~gP~~~G~l~~~~s-------~~~a~~~i~~~n~~S~~ve~~~l~~Vy~~~p~L~~~~~~~~~~~~~~~~~~~~~~~~~~ 252 (493)
+.-.+.+.+++..+ +..... .+-+++.+.=++|...+++|.++-+ |.+ +
T Consensus 164 l~~~~~~plv~~~g~~~~~~g~~~~~~---~~~vi~~i~~l~~~~~v~ER~~~~~-----------~~~-~--------- 219 (467)
T COG2211 164 LVAVLFPPLVKLFGGGDKALGYQGTAL---VLGVIGVILLLFCFFNVKERVVETQ-----------PTK-T--------- 219 (467)
T ss_pred HHHHHHHHHHHHhCCCcchhhHHHHHH---HHHHHHHHHHHHHHHHhhcccCccc-----------cCc-c---------
Confidence 55555555555543 444444 4445555555667777766664211 000 0
Q ss_pred ccccccccchhHHHHHHHHHHHHhhhccccccccceeeecccchHHHHHHHHHHHHhhh-hhhHHHHHHHH-cCCCchHH
Q 011118 253 ESLLSHDENNAELAEKRWRWKIIDWISNAPCVGAWQVYLKQEVVLPGVSLALLFFTVLS-FGTLMTATLEW-EGIPAYII 330 (493)
Q Consensus 253 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~y~~q~v~la~~alalLy~tVL~-f~~l~~~yl~~-~gls~~~i 330 (493)
+. . .+ ..+.+...++++.++--+...++++.... -++.++-|... .|-++...
T Consensus 220 ----------~~--~----~~---------~~~~~~~~~~Nrp~~~~l~~~l~~~~~~~i~~s~~~yy~~y~lg~~~l~~ 274 (467)
T COG2211 220 ----------GV--K----LK---------LKDSFLLIFKNRPLLLLLLMNLLLFIAFNIRGSIMVYYVTYVLGDPELFA 274 (467)
T ss_pred ----------cc--c----cc---------HHHHHHHHHccchHHHHHHHHHHHHHHHHHHhhhhheeEEEEcCChHHHH
Confidence 00 0 00 12223344677777766665555554443 34466666664 89999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhhhchhhhhHHHHHHHHHHHHHHHHHHhhcchHHHHHHHHHHHHhhhchhhhhhhhhh
Q 011118 331 GIARGISATIGIAATILYPILQSRISTLRTGLWSIWSQWFCLLICVASIWIHNSLVAAYMLMVGVATSRLGLWMFDLSVI 410 (493)
Q Consensus 331 G~~r~~~av~GllgT~~~~~l~~riGl~r~g~~~~~~q~~~L~~~v~~~~~~~~~~s~~~l~~gi~~SR~GLw~fDl~~~ 410 (493)
+.....+..+.+.+....|+|.||+|-.+.-.++.. +....++..++.+ ..+..+.+...+...+|.-..+....
T Consensus 275 ~~~~~~~~~~~l~~~~~~p~L~~~~gkk~~~~~~~~---~~~i~~~~~~f~~--~~~~~l~~~~~~i~~~g~~~~~~l~w 349 (467)
T COG2211 275 YLLLLASGAGLLIGLILWPRLVKKFGKKKLFLIGLL---LLAVGYLLLYFTP--AGSVVLIVVALIIAGVGTGIANPLPW 349 (467)
T ss_pred HHHHHHHHHHHHHHHHhHHHHHHHhchHHHHHHHHH---HHHHHHHHHHhhc--CcchHHHHHHHHHHHHHhhccccccH
Confidence 999999999999999999999999999888877754 3334444445554 22333333444455567777788888
Q ss_pred hhhhccCCCCcc---hhHHHHHHHHHHhh
Q 011118 411 QQMQDLVPESDR---CVVGGVQNSLQSTM 436 (493)
Q Consensus 411 ~l~Qe~vp~~~r---G~v~gv~~sl~~~f 436 (493)
.++=+.+|.+|- -|..|+..+.+.++
T Consensus 350 am~~d~vDyge~~TG~R~eGi~~s~~tF~ 378 (467)
T COG2211 350 AMVADTVDYGEWKTGVRREGIVYSGMTFF 378 (467)
T ss_pred HHhcchhhHHHHHhCCCchhhHHHHHHHH
Confidence 888887765432 24445555554444
No 91
>PRK10207 dipeptide/tripeptide permease B; Provisional
Probab=98.65 E-value=8.9e-05 Score=80.54 Aligned_cols=162 Identities=10% Similarity=-0.024 Sum_probs=89.4
Q ss_pred hhHHHHHHHHHHHHHhhHHHHHHHHHHHHHhCCCchHHHHHHHHHHHHHHHhhhccceeeecc-cchhHHHHHHHHHHHH
Q 011118 17 FLTTYLYVAHFLARWGARMWEFSVGLYMISVWPDSLLFAAIYGAVESASIALFGPIVGHWVDK-LTYVKVLQIWLVTQNL 95 (493)
Q Consensus 17 ~~~~~L~~s~~lS~~Gdr~~~Fa~~L~lv~l~~~sll~~sv~gl~~~l~~llfg~~vG~~vDr-~~R~~v~~~~~~~q~~ 95 (493)
|..+.+....+..+++--.+.--++.++..-++-+.-..+.....-.+...++.+..|.+.|| .+|||++....++..+
T Consensus 14 ~~~~~~~~~~~~er~~~y~~~~~l~~yl~~~lg~~~~~a~~i~~~~~~~~~~~~~~~G~laDr~~G~r~~~~~g~~~~~~ 93 (489)
T PRK10207 14 RPFFMIFFVELWERFGYYGVQGILAVFFVKQLGFSQEQAFITFGAFAALVYGLISIGGYVGDHLLGTKRTIVLGAIVLAI 93 (489)
T ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHhhHHHhhhhccchHHHHHHHHHHHHH
Confidence 467777777777777766666566666666554343333222222333344445678999999 8999999888755544
Q ss_pred HHHHHHHHHHHHHhhcccccchhHHHHHHHHHHHHHHHHHHhhhhhhhhhhccceEEEecCCCChhhhhhhhhHHHhHHH
Q 011118 96 SFIVAGVSVITLLFFSSLKSTNFIAFVLLVILTNISGAVGVISTLAGTILIEREWVVVISEGHPPEALTKMNSIIRRIDL 175 (493)
Q Consensus 96 ~v~~s~~~~~~~l~~~~~~~~~~~~~~~l~~~~~~~g~~~~l~~~a~~iaieRDWvv~i~~~~~~~~L~~~Na~mrriDl 175 (493)
... . + ... .......+.... +.+..+.+..+. ..++-.|+.| +++ ++..+.-+...-.-.
T Consensus 94 g~~---~---~-~~~---~~~~~ll~~~~~----l~~ig~g~~~~~-~~~li~~~~p----~~~-~~~~~~~~~~~~~~n 153 (489)
T PRK10207 94 GYF---M---T-GMS---LLKPDLIFIALG----TIAVGNGLFKAN-PASLLSKCYP----PKD-PRLDGAFTLFYMSIN 153 (489)
T ss_pred HHH---H---H-HHh---ccchhHHHHHHH----HHHhccccccCC-HHHHHHHhcC----CCc-hhhhcchhHHHHHHH
Confidence 311 1 1 111 111111111111 123333333322 2333345552 322 233444445555667
Q ss_pred HHHhhhhHHHHHHHHhhhhHHHH
Q 011118 176 TCKLLAPAITGFIISFVSLQASA 198 (493)
Q Consensus 176 ~~~l~gP~~~G~l~~~~s~~~a~ 198 (493)
++..+||.++|.+.+..|.+.+.
T Consensus 154 ig~~~g~~l~g~l~~~~gw~~~F 176 (489)
T PRK10207 154 IGSLISLSLAPVIADKFGYSVTY 176 (489)
T ss_pred HHHHHHHHHHHHHHHhhChHHHH
Confidence 78889999999999999977655
No 92
>PRK15034 nitrate/nitrite transport protein NarU; Provisional
Probab=98.60 E-value=0.00013 Score=78.65 Aligned_cols=76 Identities=11% Similarity=-0.218 Sum_probs=49.8
Q ss_pred hhHHHHHHHHHHHHHhhHHHHHHHHHHHHHhCCCchHHHHHHHHHHHHHHHhhhccceeeecccchhHHHHHHHHH
Q 011118 17 FLTTYLYVAHFLARWGARMWEFSVGLYMISVWPDSLLFAAIYGAVESASIALFGPIVGHWVDKLTYVKVLQIWLVT 92 (493)
Q Consensus 17 ~~~~~L~~s~~lS~~Gdr~~~Fa~~L~lv~l~~~sll~~sv~gl~~~l~~llfg~~vG~~vDr~~R~~v~~~~~~~ 92 (493)
|++..-+.+-+++=+.--+|.-..+.+...-++=|.-..+.....-.+...++-.+.|.++||++.|+++..+.+.
T Consensus 34 r~l~~s~~~f~~~F~~w~~~~~l~~~~~~~~~~ls~~q~g~l~ai~~l~~al~rip~G~l~Dr~G~R~v~~~~~ll 109 (462)
T PRK15034 34 RNLWISVSCLLLAFCVWMLFSAVTVNLNKIGFNFTTDQLFLLTALPSVSGALLRVPYSFMVPIFGGRRWTVFSTAI 109 (462)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCChHHHHHHHHH
Confidence 5555566666666555555555444432222555666777777767777777777789999999988888777643
No 93
>COG2270 Permeases of the major facilitator superfamily [General function prediction only]
Probab=98.59 E-value=1.8e-05 Score=83.07 Aligned_cols=158 Identities=11% Similarity=0.041 Sum_probs=102.0
Q ss_pred eeeecccchHHHHHHHHHHH-HhhhhhhHHHHHHH-HcCCCchHHHHHHHHHHHHHHHHHHHHHHHHhhhchhhhhHHHH
Q 011118 288 QVYLKQEVVLPGVSLALLFF-TVLSFGTLMTATLE-WEGIPAYIIGIARGISATIGIAATILYPILQSRISTLRTGLWSI 365 (493)
Q Consensus 288 ~~y~~q~v~la~~alalLy~-tVL~f~~l~~~yl~-~~gls~~~iG~~r~~~av~GllgT~~~~~l~~riGl~r~g~~~~ 365 (493)
|...+|+.+.--+.-.++|. -+-.--.....|.+ ..|++..++.++...-.+.++.|++++|+|.+|+|..+.-..++
T Consensus 246 k~i~~~~~i~~FLiA~~~~~DGv~til~~~~~fg~~~~gls~~~lll~g~~~~vvA~lg~ii~g~Ld~rfg~k~vl~~~l 325 (438)
T COG2270 246 KEIRGRKNLVLFLIARFFYIDGVNTILAMGGVFGAADLGLSSTELLLIGIALSVVAALGAIIAGFLDERFGSKPVLMIGL 325 (438)
T ss_pred HHHhcccchHHHHHHHHHHHhhHHHHHHHHHHHHHHHcCccHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCceeehHHH
Confidence 33445553333333335553 12222335778999 69999999999999999999999999999999999998877777
Q ss_pred HHHHHHHHHHHHHHhhcch-HHHHHHHHHHHHhhhchhhhhhhhhhhhhhccCCCCcchhHHHHHHHHHHhh-HHHHHHH
Q 011118 366 WSQWFCLLICVASIWIHNS-LVAAYMLMVGVATSRLGLWMFDLSVIQQMQDLVPESDRCVVGGVQNSLQSTM-DLMAYTM 443 (493)
Q Consensus 366 ~~q~~~L~~~v~~~~~~~~-~~s~~~l~~gi~~SR~GLw~fDl~~~~l~Qe~vp~~~rG~v~gv~~sl~~~f-~l~~~~~ 443 (493)
. +....|+...+..++ ..-++.++.|.. ==|.++ ...+++=+.+|+++-|+.+|..+-.-... -++.+..
T Consensus 326 v---i~~~~~~~~~~~~~~~~f~i~gll~g~s--~G~~qA---~SRSy~~~lvp~~k~~~fFglyaltgra~S~~gp~lv 397 (438)
T COG2270 326 V---ILSIAALYLIFLEGELDFWILGLLVGTS--LGGAQA---SSRSYLARLVPKGKEGRFFGLYALTGRAASFLGPFLV 397 (438)
T ss_pred H---HHHHHHHHHHHccccHHHHHHHHHHHHh--cchHHH---HHHHHHHHhCCCccccceeehhhhhhhHHHHHHHHHH
Confidence 5 345556665555332 112222333322 222332 33567778999999999999877665555 5555666
Q ss_pred HHhccCCCCc
Q 011118 444 GIIISNPQDF 453 (493)
Q Consensus 444 ~ii~~~p~~F 453 (493)
+++-.-.++.
T Consensus 398 ~v~t~iTg~~ 407 (438)
T COG2270 398 AVITQITGSS 407 (438)
T ss_pred HHHHHHhcch
Confidence 6555444443
No 94
>PF03209 PUCC: PUCC protein; InterPro: IPR004896 This protein is required for high-level transcription of the PUC operon. It is an integral membrane protein. The family includes other proteins form Rhodobacter eg. bacteriochlorophyll synthase.
Probab=98.41 E-value=0.00027 Score=74.20 Aligned_cols=318 Identities=12% Similarity=0.083 Sum_probs=178.0
Q ss_pred hhccceeeecccc-----hhHH-HHHHHHHHHHHHHHHHHHHHHHHhhc--ccccchhHHHHHHHHHHHHHHHHHHhhhh
Q 011118 69 FGPIVGHWVDKLT-----YVKV-LQIWLVTQNLSFIVAGVSVITLLFFS--SLKSTNFIAFVLLVILTNISGAVGVISTL 140 (493)
Q Consensus 69 fg~~vG~~vDr~~-----R~~v-~~~~~~~q~~~v~~s~~~~~~~l~~~--~~~~~~~~~~~~l~~~~~~~g~~~~l~~~ 140 (493)
+-++.|+..|+++ ||.- ++...+.+.....+.....+. +-.+ ......|.......+...+.|..-..+++
T Consensus 30 ~R~~~G~~SD~~~s~~G~rRtPyI~~G~~~~~~g~~~ap~a~~~-l~~~~~~~~~~~~~g~~~a~l~F~l~G~G~~~s~T 108 (403)
T PF03209_consen 30 LRVWFGHRSDTHPSILGWRRTPYIWGGTLLQAGGLAIAPFALLL-LAESGQQSSGPFWLGLALAALAFLLYGLGVHASGT 108 (403)
T ss_pred HHHHhccccccCcccCcCCchhhhHHHHHHHHHHHHHHHHHHHH-HcccccccccccHHHHHHHHHHHHHHHhhHhHhHH
Confidence 5789999999999 6665 444445555543433333121 1110 11112333333333222334444444444
Q ss_pred hhhhhhccceEEEecCCCChhhhhhhhhHHHhHHHHHHhhhhHHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 011118 141 AGTILIEREWVVVISEGHPPEALTKMNSIIRRIDLTCKLLAPAITGFIISFVSLQASAMTLAIWTTVTVWVEYWLFMSVY 220 (493)
Q Consensus 141 a~~iaieRDWvv~i~~~~~~~~L~~~Na~mrriDl~~~l~gP~~~G~l~~~~s~~~a~~~i~~~n~~S~~ve~~~l~~Vy 220 (493)
+ ..+.-.| ++++ ++..+.=+.+=..=.+.-+++.++.|.+..-+++.-=.-++...-.+++..-...+.++.
T Consensus 109 ~-~lALl~D----~~~e---~~R~~~v~ivw~Mli~G~iv~ai~~g~lL~~~s~~rL~~v~~~~a~i~~~l~~ia~wg~E 180 (403)
T PF03209_consen 109 S-FLALLAD----LAPE---ERRPRVVAIVWVMLIVGIIVSAIVFGRLLDPFSPERLIQVIQGVALIALLLNLIALWGQE 180 (403)
T ss_pred H-HHHHHHh----cCCH---hhhhhhHHHHHHHHHHHHHHHHHHHHHHccccCHHHHHHHHHHHHHHHHHHHHHHHHhcc
Confidence 4 2332222 2222 456677777777778888899999998877666543333333333444444444444443
Q ss_pred hhcCcchhhhhhhhccCCCcccccccCCccccccccccccchhHHHHHHHHHHHHhhhccccccccceeeecccchHHHH
Q 011118 221 KGIPALAESSQRRIRRSMPIDMEQSTSMPRERESLLSHDENNAELAEKRWRWKIIDWISNAPCVGAWQVYLKQEVVLPGV 300 (493)
Q Consensus 221 ~~~p~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~y~~q~v~la~~ 300 (493)
+|.|... +. + + ++ +.. .++-|+.+.++|--+--+
T Consensus 181 ~r~~~~~------~~---~-~-~~----------------------~~~-------------f~~a~~~~~~~~~a~~f~ 214 (403)
T PF03209_consen 181 PRRSRRA------AA---A-E-RP----------------------RPP-------------FREAWRQVWASPQARRFF 214 (403)
T ss_pred cCCcccc------cC---C-C-CC----------------------Ccc-------------HHHHHHHHHhCCChhHHH
Confidence 3333211 00 0 0 00 000 234455566777666555
Q ss_pred HHHHHHHHh-hhhhhHHHHHHHH-cCCCchH---HHHHHHHHHHHHHHHHHHHHHHHhhhchhhhhHHHHHHHHHHHHHH
Q 011118 301 SLALLFFTV-LSFGTLMTATLEW-EGIPAYI---IGIARGISATIGIAATILYPILQSRISTLRTGLWSIWSQWFCLLIC 375 (493)
Q Consensus 301 alalLy~tV-L~f~~l~~~yl~~-~gls~~~---iG~~r~~~av~GllgT~~~~~l~~riGl~r~g~~~~~~q~~~L~~~ 375 (493)
.+-++.+.- ..=|.++=.|.-+ .|+|.++ +..+.+.|...|+..+ .-.+.+|.+..|+..++...-..++..-
T Consensus 215 ~fl~l~t~a~~~QD~iLEPygg~Vfgmsv~eTT~Lta~~~~G~L~G~~~~--g~~l~~~~~~~~~a~~G~~~~~~~f~li 292 (403)
T PF03209_consen 215 VFLFLGTLAFFMQDVILEPYGGEVFGMSVGETTRLTAFWGGGTLLGMLLA--GFLLSRRLGKKRTAALGCLLGALAFALI 292 (403)
T ss_pred HHHHHHHHHHHhhHHHcCCchhHHcCCCHHHHHHHHHHHHHHHHHHHHHH--HHHhcCCCCchHHHHHHHHHHHHHHHHH
Confidence 555555332 2345577778887 7998764 5566666666666443 2234568888887776665222222221
Q ss_pred HHHHhhcchHHHHHHHHHHHHhhhchhhhhhhhhhhhhhccCCCCcchhHHHHHHHHHHhh-HHHHHHHHHhc
Q 011118 376 VASIWIHNSLVAAYMLMVGVATSRLGLWMFDLSVIQQMQDLVPESDRCVVGGVQNSLQSTM-DLMAYTMGIII 447 (493)
Q Consensus 376 v~~~~~~~~~~s~~~l~~gi~~SR~GLw~fDl~~~~l~Qe~vp~~~rG~v~gv~~sl~~~f-~l~~~~~~ii~ 447 (493)
.+. ++..+...|-.+..+-.+|-=.|.......+-+.+++++-|...|.-...|... -++.+..|.+.
T Consensus 293 ---i~a-~~~~~~~~~~~~~~l~G~g~G~f~vgals~mM~lt~~~~aG~~mG~WGaaQA~A~Glg~~~GG~~~ 361 (403)
T PF03209_consen 293 ---ILA-GPLGSPWLFRPGVFLLGLGNGLFTVGALSLMMDLTSAGRAGLFMGAWGAAQAIARGLGTFLGGALR 361 (403)
T ss_pred ---HHH-HhcccchHHHHHHHHHHHhhhHHHHHHHHHHHhCCCCcchhHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 111 122234555566666667777889999999999999999999999999998888 77777777553
No 95
>PF01306 LacY_symp: LacY proton/sugar symporter; InterPro: IPR022814 In bacteria there are a number of families of transport proteins, including symporters and antiporters, that mediate the intake of a variety of sugars with the concomitant uptake of hydrogen ions (proton symporters) []. The lacY family of Escherichia coli and Klebsiella pneumoniae are proton/beta-galactoside symporters, which, like most sugar transporters, are integral membrane proteins with 12 predicted transmembrane (TM) regions. Also similar to the lacY family are the rafinose (rafB) and sucrose (cscB) permeases from E. coli []. This entry also includes bacterial phenylproprionate permease.; PDB: 1PV7_B 1PV6_A 2Y5Y_B 2CFQ_A 2V8N_B 2CFP_A.
Probab=98.31 E-value=0.00017 Score=76.52 Aligned_cols=184 Identities=13% Similarity=0.057 Sum_probs=103.3
Q ss_pred ecccchHHHHHHHHHH-HHhhhhhhHHHHHHH----HcCCCchHHHHHHHHHHHHHHHHHHHHHHHHhhhchhhhhHHHH
Q 011118 291 LKQEVVLPGVSLALLF-FTVLSFGTLMTATLE----WEGIPAYIIGIARGISATIGIAATILYPILQSRISTLRTGLWSI 365 (493)
Q Consensus 291 ~~q~v~la~~alalLy-~tVL~f~~l~~~yl~----~~gls~~~iG~~r~~~av~GllgT~~~~~l~~riGl~r~g~~~~ 365 (493)
++.|.++....+...- ...-.||.+...|.+ +.+.+...+|...+++.+.+...=+..|++.+|+|..+.-+++.
T Consensus 217 ~k~~~fw~~~l~v~g~~~~Y~vfdqqf~~y~~~~f~~~~~g~~~~G~l~s~~v~~E~~~m~~~p~li~rig~k~~Lllag 296 (412)
T PF01306_consen 217 FKMRNFWFFVLFVIGVAAIYDVFDQQFPIYFASFFQSAGQGNQMYGYLWSVQVFLEALMMFFSPWLINRIGAKNLLLLAG 296 (412)
T ss_dssp TTSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTSSSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHH
T ss_pred hcchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccccChhHHhHHHHHHHHHHHHHHHHHHHHHHhcChHhHHHHHH
Confidence 4566665544443221 222347777777776 45677789999999999999999999999999999887765444
Q ss_pred HHHHHHHHHHHHHHhhcchH-HHHHHHHHHHHhhhchhhhhhhhhhhhhhccCCCCcchhHHHHH--HHHHHhhHHHHHH
Q 011118 366 WSQWFCLLICVASIWIHNSL-VAAYMLMVGVATSRLGLWMFDLSVIQQMQDLVPESDRCVVGGVQ--NSLQSTMDLMAYT 442 (493)
Q Consensus 366 ~~q~~~L~~~v~~~~~~~~~-~s~~~l~~gi~~SR~GLw~fDl~~~~l~Qe~vp~~~rG~v~gv~--~sl~~~f~l~~~~ 442 (493)
.. .++-.. .+-+.+++. ....=++=| --++ .+-++..+++++..|++...++..+- .+.+-..-+++..
T Consensus 297 ~i--~~iRi~-~~~~~~~~~~i~~~klLH~---~e~~--l~lva~fkYI~~~fd~rlsAt~y~v~~~~~~~~~~~i~s~~ 368 (412)
T PF01306_consen 297 VI--MAIRII-GSGFATNPWVISLIKLLHA---LEFP--LLLVAAFKYITAHFDKRLSATLYLVGFQFAKQIGIIILSPL 368 (412)
T ss_dssp HH--HHHHHH-HHHT--SHHHHHHHHHHHH---HHHH--HHHHHHHHHHHHHS-GGGHHHHHHHHHTTTHHHHHHHHHHH
T ss_pred HH--HHHHHH-HHhhhcchHHHHHHHHHHH---HHHH--HHHHHHHHHHHHhCCHhHHHHHHHHHHHHHHHHHHHHHhhh
Confidence 31 011111 112222221 111111111 1233 34788999999999988766655553 2333333556667
Q ss_pred HHHhccCCCC-chHHHHHHHHHHHHHHHHHHHH-HHHhhcCCCCh
Q 011118 443 MGIIISNPQD-FWKLILISVIVVTLAAILYTFH-LYRIRKHLFHF 485 (493)
Q Consensus 443 ~~ii~~~p~~-F~~l~~~S~~~V~~~~~l~~~~-~~~~Rghl~h~ 485 (493)
.|.+..+-+- -.++++..+ .....++..+ +++.++|.+|-
T Consensus 369 ~G~lyd~~G~~~tylimg~i---v~~~~li~~f~l~~~~~~~~~~ 410 (412)
T PF01306_consen 369 AGYLYDRIGFQHTYLIMGLI---VLPFTLISAFTLKKDKKQIVHP 410 (412)
T ss_dssp HHHHHHHHHHHHHHHHHHHH---HHHHHHHHHHHS--SSSTTCCC
T ss_pred HHhhHhhcCcHHHHHHHHHH---HHHHHHHheeeecCCCcccccC
Confidence 7777655542 234443333 2223344444 57778888884
No 96
>PRK15462 dipeptide/tripeptide permease D; Provisional
Probab=98.14 E-value=0.014 Score=63.75 Aligned_cols=164 Identities=10% Similarity=-0.039 Sum_probs=91.8
Q ss_pred hhhHHHHHHHHHHHHHhhHHHHHHHHHHHHHhCCCchHHHHHHHHHHHHHHHhhhccceeeeccc-chhHHHHHHHHHHH
Q 011118 16 SFLTTYLYVAHFLARWGARMWEFSVGLYMISVWPDSLLFAAIYGAVESASIALFGPIVGHWVDKL-TYVKVLQIWLVTQN 94 (493)
Q Consensus 16 ~~~~~~L~~s~~lS~~Gdr~~~Fa~~L~lv~l~~~sll~~sv~gl~~~l~~llfg~~vG~~vDr~-~R~~v~~~~~~~q~ 94 (493)
.+.+..++.-.+..+.+.-....-.|+++..-++-+.-..+..-..-.+...+..+..|.+.||. +|||++..+.+...
T Consensus 8 p~~l~~l~~~~~~e~fs~Yg~~~~L~~yL~~~lgls~~~a~~i~~~~~~~~~l~~ligG~LaDRilGrrr~iliG~il~~ 87 (493)
T PRK15462 8 PRAIYYVVALQIWEYFSFYGMRALLILYLTNQLKYDDNHAYELFSAYCSLVYVTPILGGFLADKVLGNRMAVMLGALLMA 87 (493)
T ss_pred ChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHccCcHHHHHHHHHHHH
Confidence 34666666666666666666666778888776555555555555555566666777899999999 99999887765544
Q ss_pred HHHHHHHHHHHHHHhhcccccchhHHHHHHHHHHHHHHHHHHhhhhhhhhhhccceEEEecCCCChhhhhhhhhHHHhHH
Q 011118 95 LSFIVAGVSVITLLFFSSLKSTNFIAFVLLVILTNISGAVGVISTLAGTILIEREWVVVISEGHPPEALTKMNSIIRRID 174 (493)
Q Consensus 95 ~~v~~s~~~~~~~l~~~~~~~~~~~~~~~l~~~~~~~g~~~~l~~~a~~iaieRDWvv~i~~~~~~~~L~~~Na~mrriD 174 (493)
+... ++ ... .......+..+... ++...++.+ +..++-.|+. ++++ ++....-+..-..-
T Consensus 88 lg~l------ll-~~~---~~~~~~~~l~l~li----~iG~G~~~~-~~~alv~elf----p~~~-~~R~sgf~i~Y~~~ 147 (493)
T PRK15462 88 IGHV------VL-GAS---EIHPSFLYLSLAII----VCGYGLFKS-NVSCLLGELY----EPTD-PRRDGGFSLMYAAG 147 (493)
T ss_pred HHHH------HH-HHh---hcchhHHHHHHHHH----HHhcccccc-cHHHHHHHHC----CCCC-ccccceehHHHHHH
Confidence 4311 11 111 10111111111111 111122221 1222323333 2221 13344444444444
Q ss_pred HHHHhhhhHHHHHHHHhhhhHHHHH
Q 011118 175 LTCKLLAPAITGFIISFVSLQASAM 199 (493)
Q Consensus 175 l~~~l~gP~~~G~l~~~~s~~~a~~ 199 (493)
.+.-.++|.++|.+.+..|.+.+..
T Consensus 148 nlG~~iap~l~g~L~~~~Gw~~~F~ 172 (493)
T PRK15462 148 NVGSIIAPIACGYAQEEYSWAMGFG 172 (493)
T ss_pred HHHHHHHHHHHHHHHhhhChHHHHH
Confidence 5688999999999988778776653
No 97
>TIGR00805 oat sodium-independent organic anion transporter. Proteins of the OAT family catalyze the Na+-independent facilitated transport of organic anions such as bromosulfobromophthalein and prostaglandins as well as conjugated and unconjugated bile acids (taurocholate and cholate, respectively). These transporters have been characterized in mammals, but homologues are present in C. elegans and A. thaliana. Some of the mammalian proteins exhibit a high degree of tissue specificity. For example, the rat OAT is found at high levels in liver and kidney and at lower levels in other tissues. These proteins possess 10-12 putative a-helical transmembrane spanners. They may catalyze electrogenic anion uniport or anion exchange.
Probab=98.10 E-value=6.2e-05 Score=84.35 Aligned_cols=73 Identities=10% Similarity=0.029 Sum_probs=58.9
Q ss_pred cceeeecccchHHHHHHHHHHH-HhhhhhhHHHHHHHH-cCCCchHHHHHHHHHHH-HHHHHHHHHHHHHhhhchh
Q 011118 286 AWQVYLKQEVVLPGVSLALLFF-TVLSFGTLMTATLEW-EGIPAYIIGIARGISAT-IGIAATILYPILQSRISTL 358 (493)
Q Consensus 286 g~~~y~~q~v~la~~alalLy~-tVL~f~~l~~~yl~~-~gls~~~iG~~r~~~av-~GllgT~~~~~l~~riGl~ 358 (493)
.++..+++|.+........+.. ...++...+..|+.+ .|+++...|.+.+...+ ++++|.++.+++.+|++..
T Consensus 322 ~~~~Ll~n~~f~~~~l~~~~~~~~~~~~~~~lP~yl~~~~g~s~~~ag~l~~~~~i~~~~vG~~l~G~l~~r~~~~ 397 (633)
T TIGR00805 322 IIKRLLCNPIYMLVILAQVIDSLAFNGYITFLPKYLENQYGISSAEANFLIGVVNLPAAGLGYLIGGFIMKKFKLN 397 (633)
T ss_pred HHHHHHcCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCcHHHHHHHhhhhhhhHHHHHHhhhhheeeeeccc
Confidence 3455688998888777766654 445788889999985 89999999999988766 5689999999999999854
No 98
>COG2807 CynX Cyanate permease [Inorganic ion transport and metabolism]
Probab=98.10 E-value=0.0079 Score=62.49 Aligned_cols=361 Identities=14% Similarity=0.163 Sum_probs=203.3
Q ss_pred HHHHHHHHHHHHhhHHHHHHHHHHHHHhCCCchHHHHHHHHHHHHHHHhhh---ccceeeecccchhHHHHHHHHHHHHH
Q 011118 20 TYLYVAHFLARWGARMWEFSVGLYMISVWPDSLLFAAIYGAVESASIALFG---PIVGHWVDKLTYVKVLQIWLVTQNLS 96 (493)
Q Consensus 20 ~~L~~s~~lS~~Gdr~~~Fa~~L~lv~l~~~sll~~sv~gl~~~l~~llfg---~~vG~~vDr~~R~~v~~~~~~~q~~~ 96 (493)
..+.++=.+-..|=|.---+++-.+-++-.+.=+-.+.-|+.+++|.+.|+ |+..++.-|..-.|.+-.+. +.
T Consensus 11 ~~li~gIvlia~NLR~~itsvgPLL~~Ir~~~gls~s~aGlLTtLPll~fg~~ap~a~~Lar~~g~er~l~~~L----ll 86 (395)
T COG2807 11 LLLLAGIVLIAFNLRPAITSVGPLLDEIRQDLGLSFSVAGLLTTLPLLAFGLFAPAAPRLARRFGEERSLFLAL----LL 86 (395)
T ss_pred hHHHHHHHHHHhccchhhhhhhhhHHHHHHHhcccHHHHHHHHHHHHHHHHHHHhhhHHHHHHHhhHHHHHHHH----HH
Confidence 566677777777777766666666777777766667777888888877655 45555544444334333332 11
Q ss_pred HHHHHHHHHHHHhhcccccchhHHHHHHHHHHHHHHHHHHhhhhhhhhhhccceEEEecCCCChhhhhhhhhHHHhHHHH
Q 011118 97 FIVAGVSVITLLFFSSLKSTNFIAFVLLVILTNISGAVGVISTLAGTILIEREWVVVISEGHPPEALTKMNSIIRRIDLT 176 (493)
Q Consensus 97 v~~s~~~~~~~l~~~~~~~~~~~~~~~l~~~~~~~g~~~~l~~~a~~iaieRDWvv~i~~~~~~~~L~~~Na~mrriDl~ 176 (493)
+++.+. +.. ....+. ++.-+.+.|+.-.+.++-.-..|.||. |.+...+-..-...=..
T Consensus 87 i~~G~~-----iR~---~~~~~~----L~~gt~l~G~gIav~nVLLPslIK~~F---------pk~~~~mtglYs~sl~~ 145 (395)
T COG2807 87 IAAGIL-----IRS---LGGLPL----LFLGTLLAGAGIAVINVLLPSLIKRDF---------PKRVGLMTGLYSTSLGA 145 (395)
T ss_pred HHHHHH-----HHh---cccHHH----HHHHHHHHHhhHHHHHHhhhHHHHhhc---------ccchhhHHhHHHHHHHH
Confidence 111111 110 111222 222233334444444555444444443 23333333333333344
Q ss_pred HHhhhhHHHHHHHHhh-hhHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCcc-hhhhhhhhccCCCcccccccCCcccccc
Q 011118 177 CKLLAPAITGFIISFV-SLQASAMTLAIWTTVTVWVEYWLFMSVYKGIPAL-AESSQRRIRRSMPIDMEQSTSMPRERES 254 (493)
Q Consensus 177 ~~l~gP~~~G~l~~~~-s~~~a~~~i~~~n~~S~~ve~~~l~~Vy~~~p~L-~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 254 (493)
+.-+||.+.-.+.+.. |.+.++. .|-..+++.-..+ .|+. +++ . ++..+. .
T Consensus 146 ~aaLaa~lavpla~~~~gW~~aL~---~WAl~allAl~~W-------lPq~~r~~---~-----~~~~~~-----~---- 198 (395)
T COG2807 146 GAALAAALAVPLAQHSGGWRGALG---FWALLALLALLIW-------LPQALREQ---A-----ASIATK-----L---- 198 (395)
T ss_pred HHHHHhhhhhHHHHhhccHHHHHH---HHHHHHHHHHHHH-------hhhccccc---c-----cccccc-----c----
Confidence 5555666666666665 4665554 4555555433322 2331 110 0 000000 0
Q ss_pred ccccccchhHHHHHHHHHHHHhhhccccccccceeeecccchHHHHHH----HHHHHHhhhhhhHHHHHHHHcCCCchHH
Q 011118 255 LLSHDENNAELAEKRWRWKIIDWISNAPCVGAWQVYLKQEVVLPGVSL----ALLFFTVLSFGTLMTATLEWEGIPAYII 330 (493)
Q Consensus 255 ~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~y~~q~v~la~~al----alLy~tVL~f~~l~~~yl~~~gls~~~i 330 (493)
.-=+..+|+|.-.....+ +++|.++.+ =+..++.++|+|+.+-
T Consensus 199 ------------------------------~~~~~vw~~~~aW~vtLfmGlqS~~~Y~~~~---WLP~ili~~G~sa~~a 245 (395)
T COG2807 199 ------------------------------VSVRKVWRSPLAWQVTLFMGLQSLLYYIVIG---WLPAILIDRGLSAAEA 245 (395)
T ss_pred ------------------------------ccccccccCchhHHHHHHHHhhHHHHHHHHH---HHHHHHHHcCCCHHHh
Confidence 000112344421111111 334433333 3777888999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhhhchhhhhHHHHHHHHHHHHHHHHHH-hhcchHHHHHHHHHHHHhhhchhhhhhhhh
Q 011118 331 GIARGISATIGIAATILYPILQSRISTLRTGLWSIWSQWFCLLICVASI-WIHNSLVAAYMLMVGVATSRLGLWMFDLSV 409 (493)
Q Consensus 331 G~~r~~~av~GllgT~~~~~l~~riGl~r~g~~~~~~q~~~L~~~v~~~-~~~~~~~s~~~l~~gi~~SR~GLw~fDl~~ 409 (493)
|.+.+...+.++..++..|.+.+|..--|--..... .|-..+.+.+ +.|...+-...++.|+- - =-.|-++.
T Consensus 246 G~llsl~~l~~~~~~ll~P~la~R~~n~r~~~~~~~---~~~l~G~~G~~~~P~~~~~lw~~llG~G---~-G~~F~laL 318 (395)
T COG2807 246 GSLLSLMQLAQLPTALLIPLLARRSKNQRPLVVLAL---LLMLVGLVGLLLAPGQLPILWALLLGLG---Q-GGAFPLAL 318 (395)
T ss_pred hhHHHHHHHHHHHHHHHHHHHHHHhcccchHHHHHH---HHHHHHHHHHHHhhhhHHHHHHHHHhCc---c-chHHHHHH
Confidence 999999999999999999999999765555443332 2333333333 34433222223344432 1 13578888
Q ss_pred hhhhhccCCCCcchhHHHHHHHHHHhh-HHHHHHHHHhccCCCCchHHHHHHHHHHHHHHHHHHHH
Q 011118 410 IQQMQDLVPESDRCVVGGVQNSLQSTM-DLMAYTMGIIISNPQDFWKLILISVIVVTLAAILYTFH 474 (493)
Q Consensus 410 ~~l~Qe~vp~~~rG~v~gv~~sl~~~f-~l~~~~~~ii~~~p~~F~~l~~~S~~~V~~~~~l~~~~ 474 (493)
+-+.++.-++++-++-+|.-.+.-++. -.+-+++|.+-...+.|...++.=+.... ..+.+.+
T Consensus 319 ~li~~rs~~a~~Aa~LSgmaQg~GYllAa~GP~l~G~lhDa~gsw~~~~~~l~~~~i--~m~i~Gl 382 (395)
T COG2807 319 TLILLRSSDAAIAAALSGMAQGVGYLLAAFGPWLFGFLHDATGSWSAPLVLLALATL--LMLIFGL 382 (395)
T ss_pred HHHHhhcCChHHHHHHHHHhhhhhHHHHhhhhhhHhHHHHhcCChHHHHHHHHHHHH--HHHHHHh
Confidence 888899999999999999999999999 99999999999999998877655444433 3444444
No 99
>TIGR01272 gluP glucose/galactose transporter. Disruption of the loci leads to the total loss of glucose or galactose uptake in E.coli. Putative transporters in other bacterial species were isolated by functional complementation, which restored it functional activity.
Probab=98.07 E-value=0.0031 Score=64.33 Aligned_cols=151 Identities=11% Similarity=0.095 Sum_probs=88.5
Q ss_pred ecccchHHHHHHHHHHHHh-hhhhhHHHHHHHH---cCCCchHHHHHHHHHHHHHHHHHHHHHHHHhhhchhhhhHHHHH
Q 011118 291 LKQEVVLPGVSLALLFFTV-LSFGTLMTATLEW---EGIPAYIIGIARGISATIGIAATILYPILQSRISTLRTGLWSIW 366 (493)
Q Consensus 291 ~~q~v~la~~alalLy~tV-L~f~~l~~~yl~~---~gls~~~iG~~r~~~av~GllgT~~~~~l~~riGl~r~g~~~~~ 366 (493)
+++|.+.-++..-++|.-+ -+..+-+..|+++ .|+++...+...+....+..+|.++.+++.+|+|..|...++..
T Consensus 137 ~~~~~~~l~~~~~f~yvg~e~~~~~w~~~yl~~~~~~g~s~~~a~~~~s~~~~~~~iGr~~~~~l~~r~g~~~~l~~~~~ 216 (310)
T TIGR01272 137 FQFTHLVLGALGIFVYVGAEVSAGSFLVNFLSDPHALGLPEDQAAHFTAYTWGGAMVGRFIGSAVMPMISQGRYLAFNAF 216 (310)
T ss_pred HhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCHHHHHHHHHH
Confidence 3455555444444556433 4678889999984 49999999999999999999999999999999998887655544
Q ss_pred HHHHHHHHHHHHHhhcchHHHHHHHHHHHHhhhchhhhhhhhhhhhhhccCCCCcchhHHHHHHHHHHhh-HHHHHHHHH
Q 011118 367 SQWFCLLICVASIWIHNSLVAAYMLMVGVATSRLGLWMFDLSVIQQMQDLVPESDRCVVGGVQNSLQSTM-DLMAYTMGI 445 (493)
Q Consensus 367 ~q~~~L~~~v~~~~~~~~~~s~~~l~~gi~~SR~GLw~fDl~~~~l~Qe~vp~~~rG~v~gv~~sl~~~f-~l~~~~~~i 445 (493)
...++ ..+....++......+++.| +|.-..=.+.....++..|++ .|+.+++. .....- -+...+.|.
T Consensus 217 l~~~~---~~l~~~~~~~~~~~~~~l~g-----~~~s~i~P~~~s~a~~~~~~~-~~~asai~-~~~~~Gg~i~P~l~G~ 286 (310)
T TIGR01272 217 LAVLL---SIGAALTHGYVAMWFVLALG-----LFNSIMFPTIFSLALNALGRH-TSQGSGIL-CLAIVGGAIVPLLQGS 286 (310)
T ss_pred HHHHH---HHHHHHcCCHHHHHHHHHHH-----HHHHHHHHHHHHHHHhhhhhh-hhhhHHHH-HHHHhcchHHHHHHHH
Confidence 22211 11111222211112222223 232222345555555556653 45666663 333332 445556676
Q ss_pred hccCCC
Q 011118 446 IISNPQ 451 (493)
Q Consensus 446 i~~~p~ 451 (493)
+...-+
T Consensus 287 lad~~g 292 (310)
T TIGR01272 287 LADCLG 292 (310)
T ss_pred HHHhcc
Confidence 665433
No 100
>TIGR00900 2A0121 H+ Antiporter protein.
Probab=98.07 E-value=0.00014 Score=73.42 Aligned_cols=132 Identities=10% Similarity=0.029 Sum_probs=92.3
Q ss_pred hhHHHHHHHHcCCCchHHHHHHHHHHHHHHHHHHHHHHHHhhhchhhhhHHHHHHHHHHHHHHHHHHhhc-chHHHHHHH
Q 011118 313 GTLMTATLEWEGIPAYIIGIARGISATIGIAATILYPILQSRISTLRTGLWSIWSQWFCLLICVASIWIH-NSLVAAYML 391 (493)
Q Consensus 313 ~~l~~~yl~~~gls~~~iG~~r~~~av~GllgT~~~~~l~~riGl~r~g~~~~~~q~~~L~~~v~~~~~~-~~~~s~~~l 391 (493)
...+..|..+.|.++.++|++.++..++..++....+++.+|+|..|...++.....++ +....+.+ ....+...+
T Consensus 19 ~~~~~~~~~~~~~s~~~~g~~~~~~~~~~~i~~~~~G~l~dr~g~r~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~ 95 (365)
T TIGR00900 19 QVALPLYVLAGTGSASVLSLAALAGMLPYVVLSPIAGALADRYDRKKVMIGADLIRAVL---VAVLPFVALLGGLNIWQV 95 (365)
T ss_pred HHHHHHHHHHhhccHHHHHHHHHHHHHHHHHHHHhhhHHHHhhchhHHHHHHHHHHHHH---HHHHHHHHHcCCCcHHHH
Confidence 34556688889999999999999999999999999999999999888776655422211 11111111 000123333
Q ss_pred HHHHHhhhchhhhhhhhhhhhhhccCCCCcchhHHHHHHHHHHhhHH-HHHHHHHhc
Q 011118 392 MVGVATSRLGLWMFDLSVIQQMQDLVPESDRCVVGGVQNSLQSTMDL-MAYTMGIII 447 (493)
Q Consensus 392 ~~gi~~SR~GLw~fDl~~~~l~Qe~vp~~~rG~v~gv~~sl~~~f~l-~~~~~~ii~ 447 (493)
..+..+..++.-.++.+...++.|..|+++|++++|...+..++..+ +..+.+.+.
T Consensus 96 ~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~l~~~l~ 152 (365)
T TIGR00900 96 YVLAGILAIAQAFFTPAYQAMLPDLVPEEQLTQANSLSQAVRSLFYIVGPGIGGLMY 152 (365)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHhHHHHHHHHHHHHHHHHHHHHH
Confidence 34444455566667888999999999999999999999988887743 344444444
No 101
>TIGR00710 efflux_Bcr_CflA drug resistance transporter, Bcr/CflA subfamily. This subfamily of drug efflux proteins, a part of the major faciliator family, is predicted to have 12 membrane-spanning regions. Members with known activity include Bcr (bicyclomycin resistance protein) in E. coli, Flor (chloramphenicol and florfenicol resistance) in Salmonella typhimurium DT104, and CmlA (chloramphenicol resistance) in Pseudomonas sp. plasmid R1033.
Probab=98.02 E-value=0.00022 Score=73.00 Aligned_cols=131 Identities=12% Similarity=0.055 Sum_probs=94.2
Q ss_pred hhhHHHHHHHHcCCCchHHHHHHHHHHHHHHHHHHHHHHHHhhhchhhhhHHHHHHHHHHHHHHHHHHhhcchHHHHHHH
Q 011118 312 FGTLMTATLEWEGIPAYIIGIARGISATIGIAATILYPILQSRISTLRTGLWSIWSQWFCLLICVASIWIHNSLVAAYML 391 (493)
Q Consensus 312 f~~l~~~yl~~~gls~~~iG~~r~~~av~GllgT~~~~~l~~riGl~r~g~~~~~~q~~~L~~~v~~~~~~~~~~s~~~l 391 (493)
+......+.++.|+++.++|.+.++..++...+..+.+++.+|+|..|....+... +........+.+ + ...+
T Consensus 24 ~~~~~p~~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~d~~g~r~~~~~~~~~---~~~~~~~~~~~~-~---~~~~ 96 (385)
T TIGR00710 24 YLPAFPEIAADLSTPASIVQMTLTLYLLGFAAGQLLWGPLSDRYGRRPVLLLGLFI---FALSSLGLALSN-N---IETL 96 (385)
T ss_pred hcccHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHhhhhHHHhcCChHHHHHHHHH---HHHHHHHHHHHc-c---HHHH
Confidence 33445556668999999999999999999999999999999999987776655431 112222222222 2 2223
Q ss_pred HHHHHhhhchhhhhhhhhhhhhhccCCCCcchhHHHHHHHHHHhh-HHHHHHHHHhccC
Q 011118 392 MVGVATSRLGLWMFDLSVIQQMQDLVPESDRCVVGGVQNSLQSTM-DLMAYTMGIIISN 449 (493)
Q Consensus 392 ~~gi~~SR~GLw~fDl~~~~l~Qe~vp~~~rG~v~gv~~sl~~~f-~l~~~~~~ii~~~ 449 (493)
..+.++..+|.-..+.....+++|..|+++||+++|...+..++. -++..+.+.+.+.
T Consensus 97 ~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~l~~~ 155 (385)
T TIGR00710 97 LVLRFVQAFGASAGSVISQALVRDIYPGEELSRIYSILMPVLALAPAVAPLLGGYILVW 155 (385)
T ss_pred HHHHHHHHcchhHHHHHHHHHHHHhcCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 344445556666778889999999999999999999999888877 4555666665543
No 102
>PRK11646 multidrug resistance protein MdtH; Provisional
Probab=97.99 E-value=0.00038 Score=73.17 Aligned_cols=128 Identities=16% Similarity=0.063 Sum_probs=92.0
Q ss_pred hhHHHHHHH-HcCCCchHHHHHHHHHHHHHHHHHHHHHHHHhhhchhhhhHHHHHHHHHHHHHHHHHHhhcchHHHHHHH
Q 011118 313 GTLMTATLE-WEGIPAYIIGIARGISATIGIAATILYPILQSRISTLRTGLWSIWSQWFCLLICVASIWIHNSLVAAYML 391 (493)
Q Consensus 313 ~~l~~~yl~-~~gls~~~iG~~r~~~av~GllgT~~~~~l~~riGl~r~g~~~~~~q~~~L~~~v~~~~~~~~~~s~~~l 391 (493)
-+.+..|+. +.|+++..+|+..+...+.+.....+.+++.+|+|..|...++.....+ .++...+.+ +.+. +
T Consensus 30 ~~~~~~~~~~~~g~s~~~~gl~~~~~~l~~~~~~~~~G~l~dr~g~k~~l~~~~~~~~~---~~~~~~~~~-~~~~---l 102 (400)
T PRK11646 30 FPLISIRFVDQLGWAAVMVGIALGLRQFIQQGLGIFGGAIADRFGAKPMIVTGMLMRAA---GFATMAIAH-EPWL---L 102 (400)
T ss_pred HHHHHHHHHHHhCCcHHHHHHHHHHHHHHHHHHHhhhhHHHHHhCchHHHHHHHHHHHH---HHHHHHHhc-cHHH---H
Confidence 345556665 6899999999999999999999999999999999988877766653222 122222222 2222 2
Q ss_pred HHHHHhhhchhhhhhhhhhhhhhccCCCCcchhHHHHHHHHHHhh-HHHHHHHHHhc
Q 011118 392 MVGVATSRLGLWMFDLSVIQQMQDLVPESDRCVVGGVQNSLQSTM-DLMAYTMGIII 447 (493)
Q Consensus 392 ~~gi~~SR~GLw~fDl~~~~l~Qe~vp~~~rG~v~gv~~sl~~~f-~l~~~~~~ii~ 447 (493)
..+.++..++--.++...+.++++.+|+++||+.+|...+..++. .++..+.+.+.
T Consensus 103 ~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~g~~ig~~l~g~l~ 159 (400)
T PRK11646 103 WLSCILSGLGGTLFDPPRTALVIKLIRPHQRGRFFSLLMMQDSAGAVIGALLGSWLL 159 (400)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 222333334444567888899999999999999999999988888 66667777776
No 103
>PRK10489 enterobactin exporter EntS; Provisional
Probab=97.96 E-value=8.9e-05 Score=77.88 Aligned_cols=160 Identities=7% Similarity=-0.001 Sum_probs=102.0
Q ss_pred ceeeecccchHHHHHHHHHHHHhhhh-hhHHHHHHHHcCCCchHHHHHHHHHHHHHHHHHHHHHHHHhhhchhhhhHHHH
Q 011118 287 WQVYLKQEVVLPGVSLALLFFTVLSF-GTLMTATLEWEGIPAYIIGIARGISATIGIAATILYPILQSRISTLRTGLWSI 365 (493)
Q Consensus 287 ~~~y~~q~v~la~~alalLy~tVL~f-~~l~~~yl~~~gls~~~iG~~r~~~av~GllgT~~~~~l~~riGl~r~g~~~~ 365 (493)
++...++|.++..+...++++...++ ......|.++.+.++.+.|..-+...++.++++...+++.+|+|..|....+.
T Consensus 10 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~g~~~~~~~l~~~~~~~~~G~l~dr~g~~~~l~~~~ 89 (417)
T PRK10489 10 LSLLKTHPAFRAVFIARFISIFGLGLLGVAVPVQIQMMTGSTLQVGLSVTLTGGAMFIGLMVGGVLADRYDRKKLILLAR 89 (417)
T ss_pred HHHHHhCCChhhHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHhhHHHhhhcCCceEEEehH
Confidence 33344667777666666666544443 33455566678889999999999999999999999999999999877666554
Q ss_pred HHHHHHHHHHHHHHhhcchHHHHHHHHHHHHhhhchhhhhhhhhhhhhhccCCCCcchhHHHHHHHHHHhh-HHHHHHHH
Q 011118 366 WSQWFCLLICVASIWIHNSLVAAYMLMVGVATSRLGLWMFDLSVIQQMQDLVPESDRCVVGGVQNSLQSTM-DLMAYTMG 444 (493)
Q Consensus 366 ~~q~~~L~~~v~~~~~~~~~~s~~~l~~gi~~SR~GLw~fDl~~~~l~Qe~vp~~~rG~v~gv~~sl~~~f-~l~~~~~~ 444 (493)
....++........+...+ +...+....++..++--.+..+...++++.+|+++|++.++......++. -++..+.+
T Consensus 90 ~~~~~~~~~~~~~~~~~~~--~~~~l~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~l~g 167 (417)
T PRK10489 90 GTCGLGFIGLALNAFLPEP--SLLAIYLLGLWDGFFGSLGVTALLAATPALVGRENLMQAGAITMLTVRLGSVISPALGG 167 (417)
T ss_pred HHHHHHHHHHHHHHHcCCC--cHHHHHHHHHHHHHHHHHHHHHHhhhhhhccCHHHHHHHHHHHHHHHhHHHHhHHHHHH
Confidence 4222222111111111111 11122222233333333456777889999999999999999987766665 55566666
Q ss_pred Hhcc
Q 011118 445 IIIS 448 (493)
Q Consensus 445 ii~~ 448 (493)
.+..
T Consensus 168 ~l~~ 171 (417)
T PRK10489 168 LLIA 171 (417)
T ss_pred HHHH
Confidence 6544
No 104
>PF07690 MFS_1: Major Facilitator Superfamily; InterPro: IPR011701 Among the different families of transporter, only two occur ubiquitously in all classifications of organisms. These are the ATP-Binding Cassette (ABC) superfamily and the Major Facilitator Superfamily (MFS). The MFS transporters are single-polypeptide secondary carriers capable only of transporting small solutes in response to chemiosmotic ion gradients [, ].; GO: 0055085 transmembrane transport, 0016021 integral to membrane; PDB: 2GFP_B 3O7P_A 3O7Q_A 1PW4_A.
Probab=97.96 E-value=0.00025 Score=71.34 Aligned_cols=127 Identities=14% Similarity=0.103 Sum_probs=93.0
Q ss_pred hHHHHHHH-HcCCCchHHHHHHHHHHHHHHHHHHHHHHHHhhhchhhhhHHHHHHHHHHHHHHHHHHhhcchHHHHHHHH
Q 011118 314 TLMTATLE-WEGIPAYIIGIARGISATIGIAATILYPILQSRISTLRTGLWSIWSQWFCLLICVASIWIHNSLVAAYMLM 392 (493)
Q Consensus 314 ~l~~~yl~-~~gls~~~iG~~r~~~av~GllgT~~~~~l~~riGl~r~g~~~~~~q~~~L~~~v~~~~~~~~~~s~~~l~ 392 (493)
..+..++. +.|.++.++|+..++..++..++....+++.+|+|..|....+.....++ +....+.++ .+ .++
T Consensus 17 ~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~r~~l~~~~~~~~~~---~~~~~~~~~-~~---~~~ 89 (352)
T PF07690_consen 17 PALPLYLAEELGLSPSQIGLLFSAFFLGSALFSPFAGYLSDRFGRRRVLIIGLLLFALG---SLLLAFASN-FW---LLL 89 (352)
T ss_dssp HHHH-HHHCCSTTTSHCHHHHHHHHHHHHHHHHHHHHHHHHHS-HHHHHHHHHHHHHHH---HHHHHHHCC-HH---HHH
T ss_pred HHHHHHHHHccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCeeeEeehhhhhhhH---HHHhhhhhh-HH---HHh
Confidence 34442444 68999999999999999999999999999999999888777776643333 112122222 12 344
Q ss_pred HHHHhhhchhhhhhhhhhhhhhccCCCCcchhHHHHHHHHHHhhHHHH-HHHHHhc
Q 011118 393 VGVATSRLGLWMFDLSVIQQMQDLVPESDRCVVGGVQNSLQSTMDLMA-YTMGIII 447 (493)
Q Consensus 393 ~gi~~SR~GLw~fDl~~~~l~Qe~vp~~~rG~v~gv~~sl~~~f~l~~-~~~~ii~ 447 (493)
.+.++..+|--.++.+...++.+..|+++|++.+|...+..++..+.. .+.+.+.
T Consensus 90 ~~~~l~g~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~g~~~g~~l~~~l~ 145 (352)
T PF07690_consen 90 IARFLLGIGSGFFSPASNALIADWFPPEERGRAFGILSAGFSLGSILGPLLGGFLI 145 (352)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHCCCTCCHHHHHHHHHHHHHHHHHHHHHHHHHCC
T ss_pred hhccccccccccccccccccccccchhhhhhhccccccchhhhhhhcccchhhhhh
Confidence 555566666677899999999999999999999999999988885544 4444554
No 105
>TIGR00893 2A0114 d-galactonate transporter.
Probab=97.94 E-value=0.00016 Score=73.24 Aligned_cols=131 Identities=15% Similarity=-0.017 Sum_probs=90.4
Q ss_pred hhhHHHHHHHHcCCCchHHHHHHHHHHHHHHHHHHHHHHHHhhhchhhhhHHHHHHHHHHHHHHHHHHhhcchHHHHHHH
Q 011118 312 FGTLMTATLEWEGIPAYIIGIARGISATIGIAATILYPILQSRISTLRTGLWSIWSQWFCLLICVASIWIHNSLVAAYML 391 (493)
Q Consensus 312 f~~l~~~yl~~~gls~~~iG~~r~~~av~GllgT~~~~~l~~riGl~r~g~~~~~~q~~~L~~~v~~~~~~~~~~s~~~l 391 (493)
++.....+.++.|+++.++|...++..++..++....+++.+|+|..|.-.++... +........+.+ +...+
T Consensus 13 ~~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~d~~g~r~~~~~~~~~---~~~~~~~~~~~~----~~~~~ 85 (399)
T TIGR00893 13 LSFAAPMLQEDLGLSAAQYGYVFSAFSWGYVVGQFPGGWLLDRFGARKTLAVFIVI---WGVFTGLQAFAG----AYVSL 85 (399)
T ss_pred hhHhHHHHHHhhCCChhhHHHHHHHHHHHHHHHHHhHHHHHHhcCcceeeHHHHHH---HHHHHHHHHHHc----CHHHH
Confidence 33334444456899999999999999999999999999999999977776655542 222222222222 22233
Q ss_pred HHHHHhhhchhhhhhhhhhhhhhccCCCCcchhHHHHHHHHHHhhH-HHHHHHHHhccC
Q 011118 392 MVGVATSRLGLWMFDLSVIQQMQDLVPESDRCVVGGVQNSLQSTMD-LMAYTMGIIISN 449 (493)
Q Consensus 392 ~~gi~~SR~GLw~fDl~~~~l~Qe~vp~~~rG~v~gv~~sl~~~f~-l~~~~~~ii~~~ 449 (493)
..+.++..+|.-.+..+...+..|..|+++||+.+|...+..++.. ++..+.+.+...
T Consensus 86 ~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~~ 144 (399)
T TIGR00893 86 YILRVLLGAAEAPFFPGIILIVASWFPASERATAVSIFNSAQGLGGIIGGPLVGWILIH 144 (399)
T ss_pred HHHHHHHHHHHHhhhhHHHHHHHHhCCHHHHHHHHHHHHHhchHHHHHHHHHHHHHHHh
Confidence 3344444555556788889999999999999999999888888774 444444544443
No 106
>PRK11663 regulatory protein UhpC; Provisional
Probab=97.94 E-value=0.00044 Score=73.37 Aligned_cols=138 Identities=15% Similarity=0.018 Sum_probs=92.8
Q ss_pred HHHHHhhhhhhHHHHHHHHcCCCchHHHHHHHHHHHHHHHHHHHHHHHHhhhchhhhhHHHHHHHHHHHHHHHHHHhhcc
Q 011118 304 LLFFTVLSFGTLMTATLEWEGIPAYIIGIARGISATIGIAATILYPILQSRISTLRTGLWSIWSQWFCLLICVASIWIHN 383 (493)
Q Consensus 304 lLy~tVL~f~~l~~~yl~~~gls~~~iG~~r~~~av~GllgT~~~~~l~~riGl~r~g~~~~~~q~~~L~~~v~~~~~~~ 383 (493)
+.|+....++..+..+..+.|+++.+.|.+.+...++..++....+++.+|+|..|...++.. .+....+...+.+
T Consensus 34 ~~~~~~~~~~~~~~~~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~G~l~dr~g~r~~~~~~~~---~~~~~~~~~~~~~- 109 (434)
T PRK11663 34 LFYFTRKSFNAAMPEMLADLGLSRSDIGLLATLFYITYGVSKFVSGIVSDRSNARYFMGIGLI---ATGIINILFGFSS- 109 (434)
T ss_pred HHHHhhhhHHHhhHHHHHhcCCCHHHHHHHHHHHHHHHHHHHhhhhHHHhhcCCchhHHHHHH---HHHHHHHHHHHHh-
Confidence 334444466777788888899999999999999999999999999999999998887665554 1222222222222
Q ss_pred hHHHHHHHHHHHHhhhchhhhhhhhhhhhhhccCCCCcchhHHHHHHHHHHhh-HHHHHHHHHhcc
Q 011118 384 SLVAAYMLMVGVATSRLGLWMFDLSVIQQMQDLVPESDRCVVGGVQNSLQSTM-DLMAYTMGIIIS 448 (493)
Q Consensus 384 ~~~s~~~l~~gi~~SR~GLw~fDl~~~~l~Qe~vp~~~rG~v~gv~~sl~~~f-~l~~~~~~ii~~ 448 (493)
+.+... ...++.+++.-..-.+...++++..|+++||+..|...+.+++. -++..+.+.+.+
T Consensus 110 ~~~~l~---~~~~l~g~~~g~~~~~~~~~~~~~~~~~~rg~~~~~~~~~~~~g~~~~~~~~~~l~~ 172 (434)
T PRK11663 110 SLWAFA---LLWVLNAFFQGWGWPVCAKLLTAWYSRTERGGWWAIWNTAHNVGGALIPLVVGAIAL 172 (434)
T ss_pred HHHHHH---HHHHHHHHHHHccchHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 222111 11111222221223566788899999999999999998888777 555566666654
No 107
>PRK11551 putative 3-hydroxyphenylpropionic transporter MhpT; Provisional
Probab=97.91 E-value=0.00073 Score=70.35 Aligned_cols=127 Identities=17% Similarity=0.035 Sum_probs=87.9
Q ss_pred hhhhHHHHHHHHcCCCchHHHHHHHHHHHHHHHHHHHHHHHHhhhchhhhhHHHHHHHHHHHHHHHHHHhhcchHHHHHH
Q 011118 311 SFGTLMTATLEWEGIPAYIIGIARGISATIGIAATILYPILQSRISTLRTGLWSIWSQWFCLLICVASIWIHNSLVAAYM 390 (493)
Q Consensus 311 ~f~~l~~~yl~~~gls~~~iG~~r~~~av~GllgT~~~~~l~~riGl~r~g~~~~~~q~~~L~~~v~~~~~~~~~~s~~~ 390 (493)
.++.....+.++.|+++.++|...+...++.+++.+..+++.+|+|..|...++..... ...+...+.+ +. ..
T Consensus 33 ~~~~~~~~~~~~~~~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~---~~~~~~~~~~-~~---~~ 105 (406)
T PRK11551 33 SAGVAAPRMAQEFGLDVAQMGWAFSAGILGLLPGALLGGRLADRIGRKRILIVSVALFG---LFSLATAQAW-DF---PS 105 (406)
T ss_pred HHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCchhHHHHHHHHH---HHHHHHHHhc-cH---HH
Confidence 34555666667899999999999999999999999999999999998888776654221 1112222222 21 12
Q ss_pred HHHHHHhhhchhhhhhhhhhhhhhccCCCCcchhHHHHHHHHHHhhHHHHHHHH
Q 011118 391 LMVGVATSRLGLWMFDLSVIQQMQDLVPESDRCVVGGVQNSLQSTMDLMAYTMG 444 (493)
Q Consensus 391 l~~gi~~SR~GLw~fDl~~~~l~Qe~vp~~~rG~v~gv~~sl~~~f~l~~~~~~ 444 (493)
++.+.++..++.-........+++|..|+++||+.+|................+
T Consensus 106 ~~~~~~l~G~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~ 159 (406)
T PRK11551 106 LLVARLLTGVGLGGALPNLIALTSEAVGPRLRGTAVSLMYCGVPFGGALASVIG 159 (406)
T ss_pred HHHHHHHHHhhHHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 222333333444445677788999999999999999998887766654444444
No 108
>cd06174 MFS The Major Facilitator Superfamily (MFS) is a large and diverse group of secondary transporters that includes uniporters, symporters, and antiporters. MFS proteins facilitate the transport across cytoplasmic or internal membranes of a variety of substrates including ions, sugar phosphates, drugs, neurotransmitters, nucleosides, amino acids, and peptides. They do so using the electrochemical potential of the transported substrates. Uniporters transport a single substrate, while symporters and antiporters transport two substrates in the same or in opposite directions, respectively, across membranes. MFS proteins are typically 400 to 600 amino acids in length, and the majority contain 12 transmembrane alpha helices (TMs) connected by hydrophilic loops. The N- and C-terminal halves of these proteins display weak similarity and may be the result of a gene duplication/fusion event. Based on kinetic studies and the structures of a few bacterial superfamily members, GlpT (glycerol-3
Probab=97.90 E-value=0.00079 Score=67.19 Aligned_cols=131 Identities=15% Similarity=0.073 Sum_probs=96.3
Q ss_pred hhhhHHHHHHHHcCCCchHHHHHHHHHHHHHHHHHHHHHHHHhhhchhhhhHHHHHHHHHHHHHHHHHHhhcchHHHHHH
Q 011118 311 SFGTLMTATLEWEGIPAYIIGIARGISATIGIAATILYPILQSRISTLRTGLWSIWSQWFCLLICVASIWIHNSLVAAYM 390 (493)
Q Consensus 311 ~f~~l~~~yl~~~gls~~~iG~~r~~~av~GllgT~~~~~l~~riGl~r~g~~~~~~q~~~L~~~v~~~~~~~~~~s~~~ 390 (493)
........|.++.|.++.++|...+...++.+.+....+++.+|+|..|.-.++.....++.. .....+ +...
T Consensus 17 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~d~~g~r~~~~~~~~~~~~~~~---~~~~~~----~~~~ 89 (352)
T cd06174 17 LLSPALPLLAEDLGLSASQAGLIVSAFSLGYALGSLLAGYLSDRFGRRRVLLLGLLLFALGSL---LLAFAS----SLWL 89 (352)
T ss_pred hhHhhHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHhHHHHHHHhCCchhhHHHHHHHHHHHH---HHHHhc----cHHH
Confidence 456677888888999999999999999999999999999999999988866655542222221 111121 2233
Q ss_pred HHHHHHhhhchhhhhhhhhhhhhhccCCCCcchhHHHHHHHHHHhh-HHHHHHHHHhcc
Q 011118 391 LMVGVATSRLGLWMFDLSVIQQMQDLVPESDRCVVGGVQNSLQSTM-DLMAYTMGIIIS 448 (493)
Q Consensus 391 l~~gi~~SR~GLw~fDl~~~~l~Qe~vp~~~rG~v~gv~~sl~~~f-~l~~~~~~ii~~ 448 (493)
+..+..+..++.-.++.....+..|..|+++|++.++......++. -++..+.+.+.+
T Consensus 90 ~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~ 148 (352)
T cd06174 90 LLVGRFLLGLGGGALYPAAAALIAEWFPPKERGRALGLFSAGFGLGALLGPLLGGLLAE 148 (352)
T ss_pred HHHHHHHHHcccccccHhHHHHHHHhCCccchhhhhhHHHHHHHHHHHHHHHHHHHHHH
Confidence 4444555556666778899999999999999999999998888777 444455555544
No 109
>TIGR00881 2A0104 phosphoglycerate transporter family protein.
Probab=97.88 E-value=0.00012 Score=74.34 Aligned_cols=130 Identities=8% Similarity=-0.072 Sum_probs=90.6
Q ss_pred HHHHHhhhhhhHHHHHHHHcCCCchHHHHHHHHHHHHHHHHHHHHHHHHhhhchhhhhHHHHHHHHHHHHHHHHHHhhcc
Q 011118 304 LLFFTVLSFGTLMTATLEWEGIPAYIIGIARGISATIGIAATILYPILQSRISTLRTGLWSIWSQWFCLLICVASIWIHN 383 (493)
Q Consensus 304 lLy~tVL~f~~l~~~yl~~~gls~~~iG~~r~~~av~GllgT~~~~~l~~riGl~r~g~~~~~~q~~~L~~~v~~~~~~~ 383 (493)
..|+..-.++..+..+..+.|+++.++|.+.++..++..++.+..+++.+|+|..+...++..... ...+...+.+
T Consensus 6 ~~~~~~~~~~~~~~~~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~---~~~~~~~~~~- 81 (379)
T TIGR00881 6 AYYLVRKNFALAMPYLVEEIGLSKTDLGLLLSSFSIAYGISKFVMGSVSDRSNPRVFLPIGLILCA---IVNLFFGFST- 81 (379)
T ss_pred HHHHhHHhhhhhhHHHHHHhCCCHhHHHHHHHHHHHHHHhhhhhhhHHHHhhCCeehhHHHHHHHH---HHHHHHHHhh-
Confidence 334444456666664445689999999999999999999999999999999998887766554221 2222222222
Q ss_pred hHHHHHHHHHHHHhhhchhhhhhhhhhhhhhccCCCCcchhHHHHHHHHHHhhHHHH
Q 011118 384 SLVAAYMLMVGVATSRLGLWMFDLSVIQQMQDLVPESDRCVVGGVQNSLQSTMDLMA 440 (493)
Q Consensus 384 ~~~s~~~l~~gi~~SR~GLw~fDl~~~~l~Qe~vp~~~rG~v~gv~~sl~~~f~l~~ 440 (493)
+...++.+.++..+|.-..+.....++.|..|+++||+..|...+..++...+.
T Consensus 82 ---~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~ 135 (379)
T TIGR00881 82 ---SLWVMAALWALNGIFQGMGWPPCGRTVTKWFSRSERGTWVSFWNCSHNVGGGLL 135 (379)
T ss_pred ---hHHHHHHHHHHHHhhccccCCchHHHHHHhcCHhhheeeEeehhccchhHHHHH
Confidence 222333344444455555678888899999999999999998888777764333
No 110
>TIGR00895 2A0115 benzoate transport.
Probab=97.87 E-value=0.00049 Score=70.33 Aligned_cols=130 Identities=15% Similarity=0.073 Sum_probs=92.2
Q ss_pred hHHHHHHHHcCCCchHHHHHHHHHHHHHHHHHHHHHHHHhhhchhhhhHHHHHHHHHHHHHHHHHHhhcchHHHHHHHHH
Q 011118 314 TLMTATLEWEGIPAYIIGIARGISATIGIAATILYPILQSRISTLRTGLWSIWSQWFCLLICVASIWIHNSLVAAYMLMV 393 (493)
Q Consensus 314 ~l~~~yl~~~gls~~~iG~~r~~~av~GllgT~~~~~l~~riGl~r~g~~~~~~q~~~L~~~v~~~~~~~~~~s~~~l~~ 393 (493)
..+..+.++.|+++..+|.+.+...++.+++.++.+++.+|+|..+...++.....++ .......+ + ...+..
T Consensus 38 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~~~~~---~~~~~~~~-~---~~~~~~ 110 (398)
T TIGR00895 38 FAAPAISAEWGLDPVQLGFLFSAGLIGMAFGALFFGPLADRIGRKRVLLWSILLFSVF---TLLCALAT-N---VTQLLI 110 (398)
T ss_pred hhHHHHhhccCCCHHHHHHHHHHHHHHHHHHHHHhHHHHHHhhhHHHHHHHHHHHHHH---HHHHHHcc-c---hHHHHH
Confidence 3445555578999999999999999999999999999999999777766655422221 11112222 2 222333
Q ss_pred HHHhhhchhhhhhhhhhhhhhccCCCCcchhHHHHHHHHHHhh-HHHHHHHHHhccCC
Q 011118 394 GVATSRLGLWMFDLSVIQQMQDLVPESDRCVVGGVQNSLQSTM-DLMAYTMGIIISNP 450 (493)
Q Consensus 394 gi~~SR~GLw~fDl~~~~l~Qe~vp~~~rG~v~gv~~sl~~~f-~l~~~~~~ii~~~p 450 (493)
+.++..+|.-..+.....++.|..|+++||+.+|...+.+.+. -++..+.+.+.+..
T Consensus 111 ~~~~~g~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~~~ 168 (398)
T TIGR00895 111 LRFLAGLGLGGLMPNLNALVSEYAPKRFRGTAVGLMFCGYPIGAAVGGFLAGWLIPVF 168 (398)
T ss_pred HHHHHhcccccchhhHHHHHHHHcCHHhhchhHhhHhhHHHHHHHHHHHHHHHHhhcc
Confidence 4444556666678889999999999999999999988888776 55566666665543
No 111
>KOG0569 consensus Permease of the major facilitator superfamily [Carbohydrate transport and metabolism]
Probab=97.85 E-value=0.043 Score=59.62 Aligned_cols=149 Identities=13% Similarity=0.107 Sum_probs=88.8
Q ss_pred ccceeeecccchHHHHHHHHHHHHhhhhhh------HHHHHHHHcCCCchHHHHHHHHHHHHHHHHHHHHHHHHhhhchh
Q 011118 285 GAWQVYLKQEVVLPGVSLALLFFTVLSFGT------LMTATLEWEGIPAYIIGIARGISATIGIAATILYPILQSRISTL 358 (493)
Q Consensus 285 ~g~~~y~~q~v~la~~alalLy~tVL~f~~------l~~~yl~~~gls~~~iG~~r~~~av~GllgT~~~~~l~~riGl~ 358 (493)
..++.++++|..|-.+...+......-|++ -.+..+++.|+++..--..-....+.-+..|++++++..|+|-.
T Consensus 256 ~sl~~~~~~~~lR~~~~i~~~v~~~qq~sGi~ai~~Yst~i~~~aG~~~~~a~~an~~~g~v~~~~t~~~~~lid~~gRR 335 (485)
T KOG0569|consen 256 ISLRQLLKNPTLRRPLLIGIVVSFAQQFSGINAIFFYSTSIFKTAGFTPEEAQYANLGIGIVNLLSTLVSPFLIDRLGRR 335 (485)
T ss_pred CcHHHHhcCcchhHHHHHHHHHHHHHHhcCcceeHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCc
Confidence 456777777777766444433332222322 22333446799998888888887888899999999999999944
Q ss_pred hhhHHHHHHHHHHHHHHHHHHhh-cch-HH----HHHHHHHHHHhhhchhhhhhhhhhhhhhccCCCCcchhHHHHHHHH
Q 011118 359 RTGLWSIWSQWFCLLICVASIWI-HNS-LV----AAYMLMVGVATSRLGLWMFDLSVIQQMQDLVPESDRCVVGGVQNSL 432 (493)
Q Consensus 359 r~g~~~~~~q~~~L~~~v~~~~~-~~~-~~----s~~~l~~gi~~SR~GLw~fDl~~~~l~Qe~vp~~~rG~v~gv~~sl 432 (493)
.--+.+...-.+++..-...... ... .+ .+...+..++...+|+ ...-.-+..|.+|++.|..+.++-.+.
T Consensus 336 pLll~~~~~~~~~~~~~~~~~~l~~~~~~~~~y~~i~~~~~~~~~f~~G~---gpi~~fi~aELf~~~~R~aa~s~~~~~ 412 (485)
T KOG0569|consen 336 PLLLISLSLMAVALLLMSIALFLSNSFGSWLSYLCIAAIFLFIISFAIGP---GPIPWFIGAELFPQSARSAAQSVATAV 412 (485)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHhhhcCC---CchhHHHHHHhCCccchHHHHHHHHHH
Confidence 44444443222222221111111 111 12 2222333333333332 344556788999999999999999998
Q ss_pred HHhh
Q 011118 433 QSTM 436 (493)
Q Consensus 433 ~~~f 436 (493)
|++.
T Consensus 413 ~w~~ 416 (485)
T KOG0569|consen 413 NWLS 416 (485)
T ss_pred HHHH
Confidence 8877
No 112
>PF03092 BT1: BT1 family; InterPro: IPR004324 Members of this family are transmembrane proteins. Several are Leishmania putative proteins that are thought to be pteridine transporters [, ]. This family also contains five putative Arabidopsis thaliana proteins of unknown function as well as two predicted prokaryotic proteins (from the cyanobacteria Synechocystis and Synechococcus).
Probab=97.79 E-value=0.005 Score=65.92 Aligned_cols=366 Identities=13% Similarity=0.159 Sum_probs=176.6
Q ss_pred HHHHHHHHHHhCCCchHHHHHHHHHHHHHHHhhhccceeeecccc-----hhHHHHHHHHHHHHHHHHHHHHHHHHHhhc
Q 011118 37 EFSVGLYMISVWPDSLLFAAIYGAVESASIALFGPIVGHWVDKLT-----YVKVLQIWLVTQNLSFIVAGVSVITLLFFS 111 (493)
Q Consensus 37 ~Fa~~L~lv~l~~~sll~~sv~gl~~~l~~llfg~~vG~~vDr~~-----R~~v~~~~~~~q~~~v~~s~~~~~~~l~~~ 111 (493)
..++.-++-.-+.-+.-..+.|....++|..+ -|+.|.+.|..| ||.=+.++-+...++ +. .+.+.+.
T Consensus 9 ~~~~~~~l~~~l~ls~~~~~~~~~~~~lPw~~-Kp~~g~lsD~~pi~G~rr~~Y~~i~~~~~~~~----~~--~~~~~~~ 81 (433)
T PF03092_consen 9 RLAIYPFLKDDLGLSPAQLQRLSSLASLPWSI-KPLYGLLSDSFPIFGYRRKPYMIIGWLLGAVS----AL--VLALLPA 81 (433)
T ss_pred HHHHHHHHHHHcCCCHHHHHHHHHHHhCchHH-hhhHHhhcccccccCCcchHHHHHHHHHHHHH----HH--HHHhccc
Confidence 34445556666677778888888888888887 999999999996 444454444332221 11 1222221
Q ss_pred ccccchhHHHHHHHHHHHHHHHHHHhhhhhhhhhhccceEEEecCCCChhhhhhhhhHHHhHHHHHHhhhhHHHHHHHHh
Q 011118 112 SLKSTNFIAFVLLVILTNISGAVGVISTLAGTILIEREWVVVISEGHPPEALTKMNSIIRRIDLTCKLLAPAITGFIISF 191 (493)
Q Consensus 112 ~~~~~~~~~~~~l~~~~~~~g~~~~l~~~a~~iaieRDWvv~i~~~~~~~~L~~~Na~mrriDl~~~l~gP~~~G~l~~~ 191 (493)
...+......++ ++......+++++..-- ++..+++++ +.-.++.+.......+..++|-.++|.+...
T Consensus 82 --~~~s~~~~~~~l---~la~~g~a~~DV~aDa~-----vvE~~~~~p-~~~g~lqS~~~~~~~~G~lv~~~l~G~l~~~ 150 (433)
T PF03092_consen 82 --SESSAAIAVVLL---FLASFGYAFADVAADAL-----VVELARREP-ESRGDLQSFVWGVRSVGSLVGSLLSGPLLDS 150 (433)
T ss_pred --ccchhhhHHHHH---HHHHHHHHHHHHhhhHH-----HHHHhhcCC-chhHHHHHHHHHHHHHHHHHHHHhhhhhhhc
Confidence 111111211222 12233345555554432 333344443 4455677777788888899998899998887
Q ss_pred hhhHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCcchhhhhhhhccCCCcccccccCCccccccccccccchhHHHHHHHH
Q 011118 192 VSLQASAMTLAIWTTVTVWVEYWLFMSVYKGIPALAESSQRRIRRSMPIDMEQSTSMPRERESLLSHDENNAELAEKRWR 271 (493)
Q Consensus 192 ~s~~~a~~~i~~~n~~S~~ve~~~l~~Vy~~~p~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 271 (493)
.++.....+....-.+..+....+ .+| +. ++++.+. .....++ .... .
T Consensus 151 ~~~~~~f~i~~~~~~l~~~~~~~~-------~~e-~~-~~~~~~~-~~~~~~~----------------~~~~--~---- 198 (433)
T PF03092_consen 151 FGPQGVFLISAALPLLMLIVALFL-------LEE-RK-VRPADEV-FSFGKEE----------------VPCL--F---- 198 (433)
T ss_pred CCCeEEehHHHHHHHHHHHHHHHh-------hhh-cc-ccccchh-hcccccc----------------cchh--h----
Confidence 775544322222222222211111 121 10 0000000 0000000 0000 0
Q ss_pred HHHHhhhccccccccceeeecccchHHHHHHHHHHHHhhhhhhHHHHHH-H-HcC---CCchHHHHHHHHHHHHHHHHHH
Q 011118 272 WKIIDWISNAPCVGAWQVYLKQEVVLPGVSLALLFFTVLSFGTLMTATL-E-WEG---IPAYIIGIARGISATIGIAATI 346 (493)
Q Consensus 272 ~~~~~~l~~~~~~~g~~~y~~q~v~la~~alalLy~tVL~f~~l~~~yl-~-~~g---ls~~~iG~~r~~~av~GllgT~ 346 (493)
....+. +.+-|+..-+..++.+.+-+-+++....+.+.-...|. + ..+ +++..+|....+|++++++|++
T Consensus 199 ~~~~~~-----~~~l~~~~~~~~i~~~~~~~~~~~~~~~~~~~a~~fy~~~~~~~gp~fs~~f~~~~~~vg~~~~l~g~~ 273 (433)
T PF03092_consen 199 GSFREQ-----LSELWRALQQRAIWQPILFFIFFFNLPPSISSASSFYFQTDALGGPHFSPSFYGTLSIVGSIASLLGIL 273 (433)
T ss_pred HHHHHH-----HHHHHHHHhhhHHHHHHHHHHHHHHhccCCCCccEEEEEeccccccccCHHHHHHHHHHHHHHHHHHHH
Confidence 000111 22333333333355555422222211122221111122 2 366 8999999999999999999999
Q ss_pred HHHHHHhhhchhhhhHHHHHHHHHHHHHHHHHH-hhcc---hH-HH--HHHHHH---HHHhhhchhhhhhhhhhhhhhcc
Q 011118 347 LYPILQSRISTLRTGLWSIWSQWFCLLICVASI-WIHN---SL-VA--AYMLMV---GVATSRLGLWMFDLSVIQQMQDL 416 (493)
Q Consensus 347 ~~~~l~~riGl~r~g~~~~~~q~~~L~~~v~~~-~~~~---~~-~s--~~~l~~---gi~~SR~GLw~fDl~~~~l~Qe~ 416 (493)
+|....++....+.-.++... .....+.-. +... .. .+ .+.+.. .-+..++.. +-..-+.=|.
T Consensus 274 ~y~~~~~~~~~R~~~~~t~~~---~~~~~l~~~~lv~~~n~~~Gi~d~~f~lgd~~l~~~~~~i~~----mP~lvl~a~l 346 (433)
T PF03092_consen 274 LYRKYFSNWSWRRIFVVTTLV---SVLASLFDLLLVTRWNLDLGIPDQWFALGDTILEEVIGMIAF----MPSLVLAARL 346 (433)
T ss_pred HHHHHHhCCCHHHHHHHHHHH---HHHHhcccEEEEEEEeeeeCcCCeEEEEEhHHHHHHHHHHHH----HHHHHHHHHH
Confidence 999999988865554433321 111111100 0000 00 00 000000 011111111 2222334467
Q ss_pred CCCCcchhHHHHHHHHHHhh-HHHHHHHHHhcc----CCCCc---hHHHHHHHHHH
Q 011118 417 VPESDRCVVGGVQNSLQSTM-DLMAYTMGIIIS----NPQDF---WKLILISVIVV 464 (493)
Q Consensus 417 vp~~~rG~v~gv~~sl~~~f-~l~~~~~~ii~~----~p~~F---~~l~~~S~~~V 464 (493)
+|+..-|.+.|...|..|+. ++.+.+...+.. +-++| +++++++...-
T Consensus 347 cP~G~Egt~yall~s~~Nlg~~~s~~lg~~l~~~~~vt~~~f~~l~~lili~~~~~ 402 (433)
T PF03092_consen 347 CPKGSEGTVYALLASFSNLGSSVSSTLGAFLMELFGVTRDDFSNLWLLILICSVIQ 402 (433)
T ss_pred CCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCcccccchHHHHHHHHHHH
Confidence 89999999999999999998 444444443322 23334 45555544444
No 113
>PRK10054 putative transporter; Provisional
Probab=97.77 E-value=0.002 Score=67.60 Aligned_cols=129 Identities=15% Similarity=0.122 Sum_probs=88.7
Q ss_pred hhhHHHHHHH-HcCCCchHHHHHHHHHHHHHHHHHHHHHHHHhhhchhhhhHHHHHHHHHHHHHHHHHHhhcchHHHHHH
Q 011118 312 FGTLMTATLE-WEGIPAYIIGIARGISATIGIAATILYPILQSRISTLRTGLWSIWSQWFCLLICVASIWIHNSLVAAYM 390 (493)
Q Consensus 312 f~~l~~~yl~-~~gls~~~iG~~r~~~av~GllgT~~~~~l~~riGl~r~g~~~~~~q~~~L~~~v~~~~~~~~~~s~~~ 390 (493)
..+.+..|+. +.|+++..+|+..++..+.++++....+++.+|+|-.|...++... +....+...+.+ +.+...+
T Consensus 26 ~~~~l~~~l~~~~g~s~~~~g~~~s~~~~~~~~~~~~~G~l~Dr~g~k~~~~~~~~~---~~~~~~~~~~~~-~~~~~~~ 101 (395)
T PRK10054 26 TLPFMTIYLSRQYSLSVDLIGYAMTIALTIGVVFSLGFGILADKFDKKRYMLLAITA---FASGFIAIPLVN-NVTLVVL 101 (395)
T ss_pred HHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCcchhHHHHHHH---HHHHHHHHHHHh-HHHHHHH
Confidence 3456778887 4899999999999999999999999999999999987766655542 222222223333 2222211
Q ss_pred HHHHHHhhhchhhhhhhhhhhhhhccCCCCcchhHHHHHHHHHHhh-HHHHHHHHHhc
Q 011118 391 LMVGVATSRLGLWMFDLSVIQQMQDLVPESDRCVVGGVQNSLQSTM-DLMAYTMGIII 447 (493)
Q Consensus 391 l~~gi~~SR~GLw~fDl~~~~l~Qe~vp~~~rG~v~gv~~sl~~~f-~l~~~~~~ii~ 447 (493)
+..+-..+...+..+..+...+.+|+++||+..|..++..++. -++..+.+.+.
T Consensus 102 ---~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~lg~~igp~l~~~l~ 156 (395)
T PRK10054 102 ---FFALINCAYSVFSTVLKAWFADNLSSTSKTKIFSLNYTMLNIGWTVGPPLGTLLV 156 (395)
T ss_pred ---HHHHHHHHHHHHHHHHHHHHHHhcCHhHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 1111123334567778888889999999999999999888877 44445555443
No 114
>PRK05122 major facilitator superfamily transporter; Provisional
Probab=97.77 E-value=0.0012 Score=68.74 Aligned_cols=136 Identities=8% Similarity=0.018 Sum_probs=94.9
Q ss_pred hhHHHHHHH-HcCCCchHHHHHHHHHHHHHHHHHHHHHHHHhhhchhhhhHHHHHHHHHHHHHHHHHHhhcc-hHHHHHH
Q 011118 313 GTLMTATLE-WEGIPAYIIGIARGISATIGIAATILYPILQSRISTLRTGLWSIWSQWFCLLICVASIWIHN-SLVAAYM 390 (493)
Q Consensus 313 ~~l~~~yl~-~~gls~~~iG~~r~~~av~GllgT~~~~~l~~riGl~r~g~~~~~~q~~~L~~~v~~~~~~~-~~~s~~~ 390 (493)
...+..|++ +.|.|+.++|+..++..++..++....+++.+|+|..|....+...-.+....+....+.+. ...+...
T Consensus 35 ~~~l~~~i~~~~g~s~~~~g~~~~~~~~~~~i~~~~~G~l~Dr~g~r~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 114 (399)
T PRK05122 35 LAVLPGYVHDQLGFSAFLAGLVISLQYLATLLSRPHAGRYADTLGPKKAVVFGLCGCALSGLLYLLAGLLAAWPVLSLLL 114 (399)
T ss_pred HHHHHHHHHHhcCccHHHHHHHHHHHHHHHHHhchhhHhHHhccCCcchHHHHHHHHHHHHHHHHHhhhhhccchhHHHH
Confidence 345666776 57999999999999999999999999999999999988877666422111111112222211 1223445
Q ss_pred HHHHHHhhhchhhhhhhhhhhhhhccCCCCcchhHHHHHHHHHHhh-HHHHHHHHHhcc
Q 011118 391 LMVGVATSRLGLWMFDLSVIQQMQDLVPESDRCVVGGVQNSLQSTM-DLMAYTMGIIIS 448 (493)
Q Consensus 391 l~~gi~~SR~GLw~fDl~~~~l~Qe~vp~~~rG~v~gv~~sl~~~f-~l~~~~~~ii~~ 448 (493)
++.+-++..+|.-.++.+...+..+.+|+++||+.+|......++. -++..+.+.+.+
T Consensus 115 l~~~r~l~G~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~g~~l~~~l~~ 173 (399)
T PRK05122 115 LLLGRLLLGIGESLAGTGSILWGIGRVGALHTGRVISWNGIATYGALAIGAPLGVLLYH 173 (399)
T ss_pred HHHHHHHHHhhHHhhcchHHHHHHhhcChhhhccchhhhhhhhhHHHHHHHHHHHHHHH
Confidence 5555556666666778888889999999999999999876666655 345555566654
No 115
>PRK03633 putative MFS family transporter protein; Provisional
Probab=97.77 E-value=0.0017 Score=67.37 Aligned_cols=131 Identities=14% Similarity=0.039 Sum_probs=88.3
Q ss_pred hhhhHHHHHHHHcCCCchHHHHHHHHHHHHHHHHHHHHHHHHhhhchhhhhHHHHHHHHHHHHHHHHHHhhcchHHHHHH
Q 011118 311 SFGTLMTATLEWEGIPAYIIGIARGISATIGIAATILYPILQSRISTLRTGLWSIWSQWFCLLICVASIWIHNSLVAAYM 390 (493)
Q Consensus 311 ~f~~l~~~yl~~~gls~~~iG~~r~~~av~GllgT~~~~~l~~riGl~r~g~~~~~~q~~~L~~~v~~~~~~~~~~s~~~ 390 (493)
.....+..|+.+.|+|+.++|+..+...++..++..+.+++.+|+|..|.-..+... .........+.+ +.+ .
T Consensus 24 ~~~~~lp~~~~~~~~s~~~~G~~~s~~~l~~~~~~~~~g~l~dr~g~k~~~~~~~~~---~~~~~~~~~~~~-~~~---~ 96 (381)
T PRK03633 24 VLNTLVPLWLAQEHLPTWQVGVVSSSYFTGNLVGTLLAGYVIKRIGFNRSYYLASLI---FAAGCAGLGLMV-GFW---S 96 (381)
T ss_pred hHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHH---HHHHHHHHHHhc-cHH---H
Confidence 355678889889999999999999999999999999999999999988877665542 222222222333 222 2
Q ss_pred HHHHHHhhhchhhhhhhhhhhhhhccCCCCcchhHHHHHHHHHHhh-HHHHHHHHHhcc
Q 011118 391 LMVGVATSRLGLWMFDLSVIQQMQDLVPESDRCVVGGVQNSLQSTM-DLMAYTMGIIIS 448 (493)
Q Consensus 391 l~~gi~~SR~GLw~fDl~~~~l~Qe~vp~~~rG~v~gv~~sl~~~f-~l~~~~~~ii~~ 448 (493)
++.+-++..+|.=.+-......+.+..|+++||+..|...+..++. .++..+.+.+.+
T Consensus 97 l~~~~~l~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~l~~ 155 (381)
T PRK03633 97 WLAWRFVAGIGCAMIWVVVESALMCSGTSRNRGRLLAAYMMVYYLGTVLGQLLVSKVST 155 (381)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHhcccc
Confidence 2222223333322334445566677788899999999887777666 555555555543
No 116
>TIGR00712 glpT glycerol-3-phosphate transporter. This model describes a very hydrophobic protein, predicted to span the membrane at least 8 times. The two members confirmed experimentally as glycerol-3-phosphate transporters, from E. coli and B. subtilis, share more than 50 % amino acid identity. Proteins of the hexose phosphate and phosphoglycerate transport systems are also quite similar.
Probab=97.76 E-value=0.00059 Score=72.46 Aligned_cols=126 Identities=10% Similarity=-0.063 Sum_probs=79.2
Q ss_pred HHHHHHcCCCchHHHHHHHHHHHHHHHHHHHHHHHHhhhchhhhhHHHHHHHHHHHHHHHHHHhhcchHHHHHHHHHHHH
Q 011118 317 TATLEWEGIPAYIIGIARGISATIGIAATILYPILQSRISTLRTGLWSIWSQWFCLLICVASIWIHNSLVAAYMLMVGVA 396 (493)
Q Consensus 317 ~~yl~~~gls~~~iG~~r~~~av~GllgT~~~~~l~~riGl~r~g~~~~~~q~~~L~~~v~~~~~~~~~~s~~~l~~gi~ 396 (493)
..|+++.|+++.++|...++..++...+....+++.+|+|..|.-.++.....++.... .+.+....+...+.....
T Consensus 50 ~p~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~G~l~dr~g~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~l~~~~~ 126 (438)
T TIGR00712 50 MPYLVEQGFSKGELGFALSAISIAYGFSKFIMGSVSDRSNPRVFLPAGLILSAAVMLLM---GFVPWATSSIAIMFVLLF 126 (438)
T ss_pred hHHHHHcCCCHhHhHHHHHHHHHHHHHhhhccchhhhccCCceehHHHHHHHHHHHHHH---hccccccchHHHHHHHHH
Confidence 44667789999999999999999999999999999999998776555443222211111 111100011122222222
Q ss_pred hhhchhhhhhhhhhhhhhccCCCCcchhHHHHHHHHHHhh-HHHHHHHHH
Q 011118 397 TSRLGLWMFDLSVIQQMQDLVPESDRCVVGGVQNSLQSTM-DLMAYTMGI 445 (493)
Q Consensus 397 ~SR~GLw~fDl~~~~l~Qe~vp~~~rG~v~gv~~sl~~~f-~l~~~~~~i 445 (493)
+.+++.-.........+.|..|+++||+.+|+.++..++. -++..+.+.
T Consensus 127 l~g~~~g~~~~~~~~~i~~~~~~~~rg~~~~~~~~~~~~g~~~~~~l~~~ 176 (438)
T TIGR00712 127 LNGWFQGMGWPPCGRTMVHWWSQSERGTIVSIWNCAHNIGGGIPPLLVLL 176 (438)
T ss_pred HHHHHhhcchHHHHHHHHHhcCcccchhHHHHHHHHHHhHhHHHHHHHHH
Confidence 2333322223445566778899999999999998887766 334444443
No 117
>PRK11102 bicyclomycin/multidrug efflux system; Provisional
Probab=97.75 E-value=0.00068 Score=69.65 Aligned_cols=128 Identities=9% Similarity=-0.007 Sum_probs=89.6
Q ss_pred hhHHHHHHHHcCCCchHHHHHHHHHHHHHHHHHHHHHHHHhhhchhhhhHHHHHHHHHHHHHHHHHHhhcchHHHHHHHH
Q 011118 313 GTLMTATLEWEGIPAYIIGIARGISATIGIAATILYPILQSRISTLRTGLWSIWSQWFCLLICVASIWIHNSLVAAYMLM 392 (493)
Q Consensus 313 ~~l~~~yl~~~gls~~~iG~~r~~~av~GllgT~~~~~l~~riGl~r~g~~~~~~q~~~L~~~v~~~~~~~~~~s~~~l~ 392 (493)
...+..|.++.|+++.++|...++..++..++....+++.+|+|..|...++.....++.. ...+.+ ..+ .+.
T Consensus 11 ~p~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~~~i~~~---~~~~~~-~~~---~~~ 83 (377)
T PRK11102 11 LPALPVIAADFGVSAGSVQMTLSAYILGFAIGQLFYGPMADSFGRKPVILGGTLVFALAAV---ACALAQ-TID---QLI 83 (377)
T ss_pred hccHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHhhchHHhhcCChHHHHHHHHHHHHHHH---HHHHHc-cHH---HHH
Confidence 3456778888999999999999999999999999999999999987776666543322222 222222 111 122
Q ss_pred HHHHhhhchhhhhhhhhhhhhhccCCCCcchhHHHHHHHHHHhh-HHHHHHHHHhc
Q 011118 393 VGVATSRLGLWMFDLSVIQQMQDLVPESDRCVVGGVQNSLQSTM-DLMAYTMGIII 447 (493)
Q Consensus 393 ~gi~~SR~GLw~fDl~~~~l~Qe~vp~~~rG~v~gv~~sl~~~f-~l~~~~~~ii~ 447 (493)
.+.++..++.-.++.....++++..|+++||+..|.......+. -++..+.+.+.
T Consensus 84 ~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~l~ 139 (377)
T PRK11102 84 YMRFLHGLAAAAASVVINALMRDMFPKEEFSRMMSFVTLVMTIAPLLAPIIGGWLL 139 (377)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 23333445555678888899999999999999999988777666 33333444443
No 118
>KOG2816 consensus Predicted transporter ADD1 (major facilitator superfamily) [General function prediction only]
Probab=97.73 E-value=0.002 Score=69.53 Aligned_cols=126 Identities=16% Similarity=0.146 Sum_probs=77.0
Q ss_pred HHHHHHhhh-hhhHHHHHHH-HcCCCchHHHHHHHHHHHHHHHHH-HHHHHHHhhhchhhhhHHHHHHHHHHHHHHHHHH
Q 011118 303 ALLFFTVLS-FGTLMTATLE-WEGIPAYIIGIARGISATIGIAAT-ILYPILQSRISTLRTGLWSIWSQWFCLLICVASI 379 (493)
Q Consensus 303 alLy~tVL~-f~~l~~~yl~-~~gls~~~iG~~r~~~av~GllgT-~~~~~l~~riGl~r~g~~~~~~q~~~L~~~v~~~ 379 (493)
-++|....+ .....+.|++ .-|.++..++.+.+.....+..+- +..|.+++.+|..+....+++.+.+.+.. ..+
T Consensus 250 ~~~~~~~~~~~~~~~~~yl~~~f~w~~~~~s~~~~~~~~~~~i~~l~~~~~l~~~l~~~~~i~lGl~~~~~~~~~--~af 327 (463)
T KOG2816|consen 250 FLSSLPEAGGASDVLLLYLKAKFGWNKKEFSDLLSLVSILGIISQLLLLPLLSSILGEKRLISLGLLSEFLQLLL--FAF 327 (463)
T ss_pred HHHHHHHhcCceeEEEEEEeeecCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhHhhHHHHHHHHHHHH--HHH
Confidence 355555543 3323477888 489999999988888777777654 45568899999888777777765544332 112
Q ss_pred hhcchH-HHHHHHHHHHHhhhchhhhhhhhhhhhhhccCCCCcchhHHHHHHHHHHhhH
Q 011118 380 WIHNSL-VAAYMLMVGVATSRLGLWMFDLSVIQQMQDLVPESDRCVVGGVQNSLQSTMD 437 (493)
Q Consensus 380 ~~~~~~-~s~~~l~~gi~~SR~GLw~fDl~~~~l~Qe~vp~~~rG~v~gv~~sl~~~f~ 437 (493)
...... +.... +.++ ++ .--.+.-.+.=..++++++|.+.++..-++.+.+
T Consensus 328 ~~~~w~~~~~~v-~~~~--~~----~~~pa~~s~~s~~v~~~e~g~v~~~is~i~~l~~ 379 (463)
T KOG2816|consen 328 ATETWMMFAAGV-VVAL--AG----IVFPAIRAFASILVSPEEQGKVFGIISGIEGLSG 379 (463)
T ss_pred hccchhhhHHHH-HHHh--hc----chhHHHHhHHHhhcccccccchhhHHHHHHHHhh
Confidence 111110 11111 1111 11 1134555566677999999999998887777763
No 119
>PRK12382 putative transporter; Provisional
Probab=97.72 E-value=0.0024 Score=66.28 Aligned_cols=136 Identities=13% Similarity=-0.012 Sum_probs=89.7
Q ss_pred hhhHHHHHHH-HcCCCchHHHHHHHHHHHHHHHHHHHHHHHHhhhchhhhhHHHHHHHHHHHHHHHHHHhhcc-hHHHHH
Q 011118 312 FGTLMTATLE-WEGIPAYIIGIARGISATIGIAATILYPILQSRISTLRTGLWSIWSQWFCLLICVASIWIHN-SLVAAY 389 (493)
Q Consensus 312 f~~l~~~yl~-~~gls~~~iG~~r~~~av~GllgT~~~~~l~~riGl~r~g~~~~~~q~~~L~~~v~~~~~~~-~~~s~~ 389 (493)
....+..|+. +.|+++.++|+..++..++..++....+++..|+|..|....+.....++....+.....+. ...+..
T Consensus 34 ~~p~l~~~l~~~lg~s~~~~g~~~s~~~~~~~i~~~~~G~l~Dr~g~r~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 113 (392)
T PRK12382 34 PLPVIPLFVHHDLGFGNTMVGIAVGIQFLATVLTRGYAGRLADQYGAKRSALQGMLACGLAGLAYLLAAILPVSAPFKFA 113 (392)
T ss_pred HhhhhhHHHHHhcCCcHHHHHHHHHHHHHHHHHHhhhhhHHHHhhcchHHHHHHHHHHHHHHHHHHhhhccccchhHHHH
Confidence 3445666776 58999999999999999999999999999999999888776665422111111111111111 122334
Q ss_pred HHHHHHHhhhchhhhhhhhhhhhhhccCCCCcchhHHHHHHHHHHhh-HHHHHHHHHhc
Q 011118 390 MLMVGVATSRLGLWMFDLSVIQQMQDLVPESDRCVVGGVQNSLQSTM-DLMAYTMGIII 447 (493)
Q Consensus 390 ~l~~gi~~SR~GLw~fDl~~~~l~Qe~vp~~~rG~v~gv~~sl~~~f-~l~~~~~~ii~ 447 (493)
.++.+-.+..+|-=.+..+...++++.+|+++||+..|......++. -++..+.+.+.
T Consensus 114 ~l~~~r~l~G~~~~~~~~~~~~~~~~~~~~~~r~~a~~~~~~~~~~g~~~g~~~~~~l~ 172 (392)
T PRK12382 114 LLVVGRLILGFGESQLLTGALTWGLGLVGPKHSGKVMSWNGMAMYGALAAGAPLGLLLH 172 (392)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhhCCccccchhhhHHHHHHHHHHHHHHHHHHHHH
Confidence 44444445555544556677788899999999999999876655554 34444445444
No 120
>KOG1330 consensus Sugar transporter/spinster transmembrane protein [Carbohydrate transport and metabolism]
Probab=97.71 E-value=0.00025 Score=75.30 Aligned_cols=75 Identities=12% Similarity=0.099 Sum_probs=59.0
Q ss_pred HHHHHHHhhHHHHHHHHHHHHHh---CCCchHHHHHHHHHHHHHHHhhhccceeeecccchhHHHHHHHHHHHHHHHH
Q 011118 25 AHFLARWGARMWEFSVGLYMISV---WPDSLLFAAIYGAVESASIALFGPIVGHWVDKLTYVKVLQIWLVTQNLSFIV 99 (493)
Q Consensus 25 s~~lS~~Gdr~~~Fa~~L~lv~l---~~~sll~~sv~gl~~~l~~llfg~~vG~~vDr~~R~~v~~~~~~~q~~~v~~ 99 (493)
--.+...=++|-++++|=.+-++ ++-+.-.-++.+.+..+..++++|..|.+.||++|++++.+.+.+=.+++.+
T Consensus 37 il~~vnlmny~Dr~~iagv~~~v~~~fni~~s~~Gll~~vf~v~~~i~sPl~gyLadryNR~~v~~vG~~iW~~Av~~ 114 (493)
T KOG1330|consen 37 ILCLVNLMNYADRYTIAGVLKEVQTYFNISDSELGLLQTVFIVVFMIASPLFGYLADRYNRKRVIAVGIFIWTLAVFA 114 (493)
T ss_pred HHHHHHHHHHhhhhhhhhhhHHHHHhcCCCchhccchhHHHHHHHHHHHHHHHHHHhhcCcceEEeeHHHHHHHHHHH
Confidence 33444455678888888776665 5557778899999999999999999999999999999998887665555443
No 121
>TIGR02332 HpaX 4-hydroxyphenylacetate permease. This protein is a part of the Major Facilitator Superfamily (Pfam family pfam07690). Member of this family are found in a number of proteobacterial genomes, but only in the context of having genes for 4-hydroxyphenylacetate (4-HPA) degradation. The protein is characterized by Prieto, et al. (PubMed:9315705) as 4-hydroxyphenylacetate permease in E. coli, where 3-HPA and 3,4-dihydroxyphenylacetate are shown to competitively inhibit 4-HPA transport and therefore also interact specificially.
Probab=97.70 E-value=0.0018 Score=68.44 Aligned_cols=129 Identities=14% Similarity=0.024 Sum_probs=85.5
Q ss_pred hhhhHHHHHHH-HcCCCchHHHHHHHHHHHHHHHHHHHHHHHHhhhchhhhhHHHHHHHHHHHHHHHHHHhhcchHHHHH
Q 011118 311 SFGTLMTATLE-WEGIPAYIIGIARGISATIGIAATILYPILQSRISTLRTGLWSIWSQWFCLLICVASIWIHNSLVAAY 389 (493)
Q Consensus 311 ~f~~l~~~yl~-~~gls~~~iG~~r~~~av~GllgT~~~~~l~~riGl~r~g~~~~~~q~~~L~~~v~~~~~~~~~~s~~ 389 (493)
..+.... ++. +.|+++..+|...++..++..++.+..+++.+|+|..|....+... .....+...+.++ ...
T Consensus 26 ~~~~~~~-~l~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~G~r~~~~~~~~~---~~~~~~~~~~~~~-~~~-- 98 (412)
T TIGR02332 26 NIGFAGL-TMGKDLGLSATMFGLAATLFYAAYVICGIPSNIMLAIIGARRWIAGIMVL---WGIASTATMFATG-PES-- 98 (412)
T ss_pred hHHHHHH-hhHhhcCCCHHHHHHHHHHHHHHHHHHHhhHHHHHHHhChHHHHHHHHHH---HHHHHHHHHHhcC-HHH--
Confidence 3433444 444 7999999999999999999999999999999999998877655542 1222222223322 111
Q ss_pred HHHHHHHhhhchhhhhhhhhhhhhhccCCCCcchhHHHHHHHHHHhh-HHHHHHHHHhc
Q 011118 390 MLMVGVATSRLGLWMFDLSVIQQMQDLVPESDRCVVGGVQNSLQSTM-DLMAYTMGIII 447 (493)
Q Consensus 390 ~l~~gi~~SR~GLw~fDl~~~~l~Qe~vp~~~rG~v~gv~~sl~~~f-~l~~~~~~ii~ 447 (493)
+..+-.+..+|.-.+-.+...+++|..|+++||+..|...+..... -++..+.+.+.
T Consensus 99 -l~~~r~l~G~~~~~~~~~~~~~~~~~~~~~~rg~~~~~~~~~~~~g~~~~~~~~~~l~ 156 (412)
T TIGR02332 99 -LYLLRILVGIAEAGFLPGILLYLTFWFPAYFRARANALFMIAMPVTMALGLILSGYIL 156 (412)
T ss_pred -HHHHHHHHHHHHhhHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 1122222233333344677788999999999999999988777665 44445555554
No 122
>PRK10473 multidrug efflux system protein MdtL; Provisional
Probab=97.69 E-value=0.0026 Score=66.04 Aligned_cols=121 Identities=10% Similarity=0.070 Sum_probs=81.7
Q ss_pred HHHHHHHcCCCchHHHHHHHHHHHHHHHHHHHHHHHHhhhchhhhhHHHHHHHHHHHHHHHHHHhhcchHHHHHHHHHHH
Q 011118 316 MTATLEWEGIPAYIIGIARGISATIGIAATILYPILQSRISTLRTGLWSIWSQWFCLLICVASIWIHNSLVAAYMLMVGV 395 (493)
Q Consensus 316 ~~~yl~~~gls~~~iG~~r~~~av~GllgT~~~~~l~~riGl~r~g~~~~~~q~~~L~~~v~~~~~~~~~~s~~~l~~gi 395 (493)
+..+.++.|.++..+|+..+...++...+....+++.+|+|-.|....+.. .+........+.+ +.. .+..+.
T Consensus 26 lp~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~G~l~Dr~g~r~~l~~~~~---~~~i~~~~~~~~~-~~~---~~~~~~ 98 (392)
T PRK10473 26 LPRIAADLNASEAQLHIAFSVYLAGMAAAMLFAGKIADRSGRKPVAIPGAA---LFIIASLLCSLAE-TSS---LFLAGR 98 (392)
T ss_pred HHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHhHhHHHHHhCChHHHHHHHH---HHHHHHHHHHHhC-cHH---HHHHHH
Confidence 344455789999999999999999999999999999999997766655443 1222222222222 211 222233
Q ss_pred HhhhchhhhhhhhhhhhhhccCCCCcchhHHHHHHHHHHhhHHHHHHH
Q 011118 396 ATSRLGLWMFDLSVIQQMQDLVPESDRCVVGGVQNSLQSTMDLMAYTM 443 (493)
Q Consensus 396 ~~SR~GLw~fDl~~~~l~Qe~vp~~~rG~v~gv~~sl~~~f~l~~~~~ 443 (493)
.+..++.-.++.....++.|..|+++|++..|..+...++........
T Consensus 99 ~l~g~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~i~~~~~~~i 146 (392)
T PRK10473 99 FLQGIGAGCCYVVAFAILRDTLDDRRRAKVLSLLNGITCIIPVLAPVL 146 (392)
T ss_pred HHHHhhhhHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 333444445567778888999999999999999888877664443333
No 123
>KOG2504 consensus Monocarboxylate transporter [Carbohydrate transport and metabolism]
Probab=97.68 E-value=0.01 Score=64.93 Aligned_cols=388 Identities=14% Similarity=0.125 Sum_probs=200.5
Q ss_pred HHhCCCchHHHHHHHHHHHHHHHhhhccceeeecccchhHHHHHHHHHHHHHHHHHHHHHHHHHhhcccccchhHHHHHH
Q 011118 45 ISVWPDSLLFAAIYGAVESASIALFGPIVGHWVDKLTYVKVLQIWLVTQNLSFIVAGVSVITLLFFSSLKSTNFIAFVLL 124 (493)
Q Consensus 45 v~l~~~sll~~sv~gl~~~l~~llfg~~vG~~vDr~~R~~v~~~~~~~q~~~v~~s~~~~~~~l~~~~~~~~~~~~~~~l 124 (493)
.+-++.+--.++..+.+......+.+|.++.+.||++.|+++++..++..+...+++.+ ..-|..+ +.
T Consensus 73 ~~~f~~s~~~~~~i~sl~~~~~~~~gpl~s~l~~rfg~R~v~i~G~~v~~~g~~lssF~-----------~~i~~l~-lt 140 (509)
T KOG2504|consen 73 MDYFGSSSSQIAWIGSLLLGVYLLAGPLVSALCNRFGCRTVMIAGGLVAALGLLLSSFA-----------TSLWQLY-LT 140 (509)
T ss_pred HHHhCCCccHHHHHHHHHHHHHHHhccHHHHHHhhcCchHHHHHHHHHHHHHHHHHHHH-----------hhHHHHH-HH
Confidence 34566666668888888888889999999999999999999988875555553322221 1112111 11
Q ss_pred HHHHHHHHHHHHhhhhhhhhhhccceEEEecCCCChhhhhhhhhHHHhHHHHHHhhhhHHHHHHHHhhhhHHHHHHHHHH
Q 011118 125 VILTNISGAVGVISTLAGTILIEREWVVVISEGHPPEALTKMNSIIRRIDLTCKLLAPAITGFIISFVSLQASAMTLAIW 204 (493)
Q Consensus 125 ~~~~~~~g~~~~l~~~a~~iaieRDWvv~i~~~~~~~~L~~~Na~mrriDl~~~l~gP~~~G~l~~~~s~~~a~~~i~~~ 204 (493)
+ ..+.|+-..+.. ..+ ++.+..-=+ .+...+|..--.-+-+.-++=|.+.-.++...|.+.+.......
T Consensus 141 ~--gvi~G~G~~~~~---~pa-----iviv~~YF~-kkR~lA~Gia~~GsG~G~~~~~~l~~~l~~~~G~r~~~l~~~~~ 209 (509)
T KOG2504|consen 141 F--GVIGGLGLGLIY---LPA-----VVILGTYFE-KKRALATGIAVSGTGVGTVVFPPLLKYLLSKYGWRGALLIFGGI 209 (509)
T ss_pred H--HHHhhccchhhh---cch-----hhhhhhHhH-HHHHHHHhhhhccCCcceeeHHHHHHHHHHHhCcHHHHHHHHHH
Confidence 1 111122111111 112 222221111 34567777776666676777777777788888888776544333
Q ss_pred HHHHHHHHHHHHHHHHhhcCcchhhhhhhhccCCCcccccccCCcc----ccccccccccchhHHHHHHHHHHHHhhhcc
Q 011118 205 TTVTVWVEYWLFMSVYKGIPALAESSQRRIRRSMPIDMEQSTSMPR----ERESLLSHDENNAELAEKRWRWKIIDWISN 280 (493)
Q Consensus 205 n~~S~~ve~~~l~~Vy~~~p~L~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 280 (493)
- ++. ......|+..+....++++++.++...+.+......+ +.++.... ...++... .++..++...
T Consensus 210 ~-l~~----~~~~~~~rp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~---~~~~~~~~~~ 280 (509)
T KOG2504|consen 210 S-LNV----LVAGALLRPLSPPKKPNEEKDLRNSAASVESTPKPVELRISERDSGLKK-LSLSNLAT---LKRGPDKWRN 280 (509)
T ss_pred H-HHH----HHHHHHcCCCCcCCCchhhhhhccccccccccccccccccccCCCCCCc-ccccchhh---hhhCCccccc
Confidence 3 223 2333333332111111101100000000000000000 00000000 00000000 0000000000
Q ss_pred ccccccc----eeeecccchHHHH-HHHHHHHHhhhhhhHHHHHHHHcCCCchHHHHHHHHHHHHHHHHHHHHHHHHhhh
Q 011118 281 APCVGAW----QVYLKQEVVLPGV-SLALLFFTVLSFGTLMTATLEWEGIPAYIIGIARGISATIGIAATILYPILQSRI 355 (493)
Q Consensus 281 ~~~~~g~----~~y~~q~v~la~~-alalLy~tVL~f~~l~~~yl~~~gls~~~iG~~r~~~av~GllgT~~~~~l~~ri 355 (493)
....... ...+++|.|+--. +..+.++-...+......|.+++|+++...+...++.++..+.|=++.+++..+-
T Consensus 281 ~~~~~~~~~~d~~ll~~~~fl~~~~~~~~~~~g~~~p~~~l~~~~~~~g~~~~~aa~l~Siigi~~i~gRi~~G~laD~~ 360 (509)
T KOG2504|consen 281 SPLQAFLSMLDLSLLKDPKFLLLALSNLFAYLGFNVPFVYLPSYAKSLGLSSNDAAFLLSIIGVSDIIGRIILGLLADKP 360 (509)
T ss_pred cchhhhhhhhhHHHHcCchHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCChhhhHHHHHHHHHhhhhhhhhhhhhcCcc
Confidence 0001111 2345666554322 2223333334466678888899999999999999999999999999999999988
Q ss_pred chhhhhHHHHHHHHHHHHHHHHH-Hhhcc--hHH--HHHHHHHHHHhhhchhhhhhhhhhhhhhccCCCCcchhHHHHHH
Q 011118 356 STLRTGLWSIWSQWFCLLICVAS-IWIHN--SLV--AAYMLMVGVATSRLGLWMFDLSVIQQMQDLVPESDRCVVGGVQN 430 (493)
Q Consensus 356 Gl~r~g~~~~~~q~~~L~~~v~~-~~~~~--~~~--s~~~l~~gi~~SR~GLw~fDl~~~~l~Qe~vp~~~rG~v~gv~~ 430 (493)
...+.-.. .+++..+.+. .+.|. +.+ ..+-.+.|.. .| .|-.-...+.=+.++.++.....|.+.
T Consensus 361 ~~~~~~~~-----~~~ll~~gl~~~~~p~~~~~~~l~~~~~~fG~~---~g--~~~~l~~~i~~~~~g~~~l~~a~Gl~l 430 (509)
T KOG2504|consen 361 GIRALVLF-----LLTLLIAGLARLFLPFATTYVGLIVFSILFGFC---VG--SFSSLTPVILVDLVGLEKLSNAYGLLL 430 (509)
T ss_pred ccchHHHH-----HHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHH---HH--HHHHHHHHHHHHHcChhhcchHHHHHH
Confidence 84333322 2344333332 33321 221 1111222222 11 112222256667788888999999988
Q ss_pred HHHHhh-HHHHHHHHHhccCCCCchHHHHHHHHHHHHHHHHHHHH
Q 011118 431 SLQSTM-DLMAYTMGIIISNPQDFWKLILISVIVVTLAAILYTFH 474 (493)
Q Consensus 431 sl~~~f-~l~~~~~~ii~~~p~~F~~l~~~S~~~V~~~~~l~~~~ 474 (493)
-.+.++ =.+.-+.+.+-...+++......+-.....++.++...
T Consensus 431 ~~~gi~~l~gpPiag~~~d~tg~Y~~~f~~~g~~~~~s~~~~~~~ 475 (509)
T KOG2504|consen 431 LFQGIGALVGPPIAGLLYDITGNYDHAFYFCGLCFLLSAVLLLIL 475 (509)
T ss_pred HHhHHHHHcCcccceeeeeccCCeeeehhhcChHHHHHHHHHHHh
Confidence 888888 56666777777888878777777766666666555443
No 124
>TIGR00897 2A0118 polyol permease family. This family of proteins includes the ribitol and D-arabinitol transporters from Klebsiella pneumoniae and the alpha-ketoglutarate permease from Bacillus subtilis.
Probab=97.66 E-value=0.003 Score=66.24 Aligned_cols=132 Identities=11% Similarity=0.009 Sum_probs=86.7
Q ss_pred HHHHHHHHcCCCchHHHHHHHHHHHHHHHHHHHHHHHHhhhchhhhhHHHHHHHHHHHHHHHHHHhhcchHHHHHHHHHH
Q 011118 315 LMTATLEWEGIPAYIIGIARGISATIGIAATILYPILQSRISTLRTGLWSIWSQWFCLLICVASIWIHNSLVAAYMLMVG 394 (493)
Q Consensus 315 l~~~yl~~~gls~~~iG~~r~~~av~GllgT~~~~~l~~riGl~r~g~~~~~~q~~~L~~~v~~~~~~~~~~s~~~l~~g 394 (493)
.+..|+++.|+++.++|...+...++..++....+++.+|+|..|...++.....++...........++.+.. ...
T Consensus 35 ~~~~~~~~~g~s~~~~g~~~~~~~~~~~i~~~~~g~l~dr~g~k~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l---~~~ 111 (402)
T TIGR00897 35 WLSPFLKALGLSPQQSASAFTLYGIAAAISAWISGVVAEIIGPLKTMMIGLLLWCVGHAAFIVFGLGHANYPLI---LLF 111 (402)
T ss_pred hHHHHHHHhCCCHHHhHHHHHHHHHHHHHHHHHHHHHHHHcCcHHHHHHHHHHHHHHHHHHHHHhccCccHHHH---HHH
Confidence 45567778999999999999999999999999999999999999887776653222211111101111122211 122
Q ss_pred HHhhhchhhhhhhhhhhhhhccCCCCcchhHHHHHHHHHHhhH--HHHHHHHHhccC
Q 011118 395 VATSRLGLWMFDLSVIQQMQDLVPESDRCVVGGVQNSLQSTMD--LMAYTMGIIISN 449 (493)
Q Consensus 395 i~~SR~GLw~fDl~~~~l~Qe~vp~~~rG~v~gv~~sl~~~f~--l~~~~~~ii~~~ 449 (493)
-.+..+|.-.+-......+.+.+|+++||+.+|...+.+++.. ++..+.+.+.+.
T Consensus 112 ~~i~G~g~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~~~g~~~~~~l~~~ 168 (402)
T TIGR00897 112 YGIRGLGYPLFAYSFLVWVVYNTKQDNLSSAVGWFWAVYSIGIGVFGSYYSSYAIPA 168 (402)
T ss_pred HHHHHcchHHHHhHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccc
Confidence 2223344433444556677788999999999999888877652 344555555543
No 125
>TIGR00891 2A0112 putative sialic acid transporter.
Probab=97.65 E-value=0.0036 Score=64.33 Aligned_cols=129 Identities=9% Similarity=-0.031 Sum_probs=89.3
Q ss_pred hhhHHHHHHHHcCCCchHHHHHHHHHHHHHHHHHHHHHHHHhhhchhhhhHHHHHHHHHHHHHHHHHHhhcchHHHHHHH
Q 011118 312 FGTLMTATLEWEGIPAYIIGIARGISATIGIAATILYPILQSRISTLRTGLWSIWSQWFCLLICVASIWIHNSLVAAYML 391 (493)
Q Consensus 312 f~~l~~~yl~~~gls~~~iG~~r~~~av~GllgT~~~~~l~~riGl~r~g~~~~~~q~~~L~~~v~~~~~~~~~~s~~~l 391 (493)
++.....+.++.|+++.++|...++..++..++....+++.+|+|..|.-.++... ....+....+.+ + ...+
T Consensus 31 ~~~~~~~l~~~~~~s~~~~g~~~~~~~~~~~~~~~~~G~l~Dr~g~r~~~~~~~~~---~~~~~~~~~~~~-~---~~~l 103 (405)
T TIGR00891 31 VALVLAEVAGEFGLTTVDAASLISAALISRWFGALMFGLWGDRYGRRLPMVTSIVL---FSAGTLACGFAP-G---YITM 103 (405)
T ss_pred HHHHHHHHHHHhCCChhhHHHHHHHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHH---HHHHHHHHHHhc-c---HHHH
Confidence 44455656567999999999999999999999999999999999988876655431 112222222222 2 2223
Q ss_pred HHHHHhhhchhhhhhhhhhhhhhccCCCCcchhHHHHHHHHHHhh-HHHHHHHHHhc
Q 011118 392 MVGVATSRLGLWMFDLSVIQQMQDLVPESDRCVVGGVQNSLQSTM-DLMAYTMGIII 447 (493)
Q Consensus 392 ~~gi~~SR~GLw~fDl~~~~l~Qe~vp~~~rG~v~gv~~sl~~~f-~l~~~~~~ii~ 447 (493)
+.+-++..+|.-.++.....++-|..|+++||+.+|...+...+. -++..+.+.+.
T Consensus 104 ~~~~~l~G~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~g~~~~~~l~~~l~ 160 (405)
T TIGR00891 104 FIARLVIGIGMGGEYGSSAAYVIESWPKHLRNKASGLLISGYAVGAVVAAQVYSLVV 160 (405)
T ss_pred HHHHHHHHhhhhhhhHHHHHHHHHhCChhhhhHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 334444455555677888888889999999999999888776665 44444444443
No 126
>PRK10091 MFS transport protein AraJ; Provisional
Probab=97.65 E-value=0.0027 Score=65.96 Aligned_cols=130 Identities=13% Similarity=-0.002 Sum_probs=85.9
Q ss_pred hhhhhHHHHHHHHcCCCchHHHHHHHHHHHHHHHHHHHHHHHHhhhchhhhhHHHHHHHHHHHHHHHHHHhhcchHHHHH
Q 011118 310 LSFGTLMTATLEWEGIPAYIIGIARGISATIGIAATILYPILQSRISTLRTGLWSIWSQWFCLLICVASIWIHNSLVAAY 389 (493)
Q Consensus 310 L~f~~l~~~yl~~~gls~~~iG~~r~~~av~GllgT~~~~~l~~riGl~r~g~~~~~~q~~~L~~~v~~~~~~~~~~s~~ 389 (493)
....++++.+..+.|+++..+|...++..++.+++....+++.+|+|..|.-..+... +....+...+.+ +.+.
T Consensus 20 ~~~~~~l~~~~~~~g~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~---~~~~~~l~~~~~-~~~~-- 93 (382)
T PRK10091 20 FGIMGVLTELAHDVGISIPAAGHMISYYALGVVVGAPIIALFSSRYSLKHILLFLVAL---CVIGNAMFTLSS-SYLM-- 93 (382)
T ss_pred HHHHhChHHHHHHcCCCHHHHhHHHHHHHHHHHHHHHHHHHHHccCccHHHHHHHHHH---HHHHHHHHHHhC-cHHH--
Confidence 4466677777778999999999999999999999999999999999988777665542 222222223333 2222
Q ss_pred HHHHHHHhhhchhhhhhhhhhhhhhccCCCCcchhHHHHHHHHHHhhH-HHHHHHHHh
Q 011118 390 MLMVGVATSRLGLWMFDLSVIQQMQDLVPESDRCVVGGVQNSLQSTMD-LMAYTMGII 446 (493)
Q Consensus 390 ~l~~gi~~SR~GLw~fDl~~~~l~Qe~vp~~~rG~v~gv~~sl~~~f~-l~~~~~~ii 446 (493)
++.+-++..++.-.+-.....+.++..|+++|++..|...+.+++.. ++..+.+.+
T Consensus 94 -l~~~r~l~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~l~~~l 150 (382)
T PRK10091 94 -LAIGRLVSGFPHGAFFGVGAIVLSKIIKPGKVTAAVAGMVSGMTVANLLGIPLGTYL 150 (382)
T ss_pred -HHHHHHHHHhhhHHHHHHHHHHHHHhCChHHhhHHHHHHHHHHHHHHHHhccHHHHH
Confidence 22222233333223334556678888999999999988776666553 333444444
No 127
>TIGR00885 fucP L-fucose:H+ symporter permease. This family describes the L-fucose permease in bacteria. L-fucose(6-deoxy-L-galactose) is a monosaccharide found in glycoproteins and cell wall polysaccharides. L-fucose is used in bacteria through an inducible pathway mediated by atleast four enzymes: a permease, isomerase, kinase and an aldolase which are encoded by fucP, fucI, fucK, fucA respectively. The fuc genes belong to a regulon comprising of four linked operons: fucO, fucA, fucPIK and fucR. The positive regulator is encoded by fucR, whose protein responds to fuculose-1-phosphate, which acts as an effector.
Probab=97.61 E-value=0.0041 Score=65.89 Aligned_cols=129 Identities=12% Similarity=0.027 Sum_probs=95.5
Q ss_pred HHHHHHHHcCCCchHHHHHHHHHHHHHHHHHHHHHHHHhhhchhhhhHHHHHHHHHHHHHHHHHHhhcchHHHHHHHHHH
Q 011118 315 LMTATLEWEGIPAYIIGIARGISATIGIAATILYPILQSRISTLRTGLWSIWSQWFCLLICVASIWIHNSLVAAYMLMVG 394 (493)
Q Consensus 315 l~~~yl~~~gls~~~iG~~r~~~av~GllgT~~~~~l~~riGl~r~g~~~~~~q~~~L~~~v~~~~~~~~~~s~~~l~~g 394 (493)
+...+..+.|+++.+.|...+...++.++++...+++.+|+|..|+..++... +...+......+ ...+...++.+
T Consensus 25 l~~~~~~~~~~s~~~~g~l~s~~~~g~~i~~~~~g~l~~r~G~r~~~~~g~~l---~~~g~~l~~~~~-~~~~~~~~l~~ 100 (410)
T TIGR00885 25 MVPQFQQAFTLTAFQAALVQSAFYGGYFIMAIPAAIFMKKLSYKAGILLGLFL---YALGAFLFWPAA-EIMNYTLFLVG 100 (410)
T ss_pred HHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCchHHHHHHHHH---HHHHHHHHHHHH-hhccHHHHHHH
Confidence 44444446899999999999999999999999999999999988888777652 222222211111 11234455666
Q ss_pred HHhhhchhhhhhhhhhhhhhccCCCCcchhHHHHHHHHHHhh-HHHHHHHHHhc
Q 011118 395 VATSRLGLWMFDLSVIQQMQDLVPESDRCVVGGVQNSLQSTM-DLMAYTMGIII 447 (493)
Q Consensus 395 i~~SR~GLw~fDl~~~~l~Qe~vp~~~rG~v~gv~~sl~~~f-~l~~~~~~ii~ 447 (493)
..+.++|.-.++...+.++++..|+++|++..+..++.+++- -++..+.+.+.
T Consensus 101 ~~l~G~g~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lG~~~g~~i~~~l~ 154 (410)
T TIGR00885 101 LFILTAGLGFLETAANPYILVMGPESTATRRLNLAQSFNPFGSIIGMVVAQQLI 154 (410)
T ss_pred HHHHHhhHHHHHhhhhHHHHHHCCHhHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 777888888999999999999999999999988887777776 55555555443
No 128
>COG2223 NarK Nitrate/nitrite transporter [Inorganic ion transport and metabolism]
Probab=97.61 E-value=0.14 Score=54.26 Aligned_cols=380 Identities=14% Similarity=0.113 Sum_probs=202.6
Q ss_pred cchhhHHHHHHHHHHHHHhhHHHHHHHHHHH--HHhCCCchHHHHHHHHHHHHHHHhhhccceeeecccchhHHHHHHHH
Q 011118 14 ITSFLTTYLYVAHFLARWGARMWEFSVGLYM--ISVWPDSLLFAAIYGAVESASIALFGPIVGHWVDKLTYVKVLQIWLV 91 (493)
Q Consensus 14 ~~~~~~~~L~~s~~lS~~Gdr~~~Fa~~L~l--v~l~~~sll~~sv~gl~~~l~~llfg~~vG~~vDr~~R~~v~~~~~~ 91 (493)
.++..-+.|+.|-+.-..+--+|..--|+-. ..-+.=|--+.+.....-.+...++=.+.|-|.||++-|++...+.+
T Consensus 8 ~k~~~~~~L~~S~~af~v~F~VW~l~s~l~~~i~~~~~LS~~q~~ll~aiPil~GallRl~~g~l~drfGgR~~~~~s~~ 87 (417)
T COG2223 8 GKRIARRNLWLSTLAFDVGFMVWTLFSPLGVFIKSDFGLSEGQKGLLVAIPILVGALLRLPYGFLTDRFGGRKWTILSML 87 (417)
T ss_pred cccchhHHHHHHHHHHHHHHHHHHHHHHHHhhhccccCCCHHHHHHHHHHHHHHhHHHHHHHHhhhcccCchHHHHHHHH
Confidence 3444567788888888888888888777632 22344467777888888888888888999999999976666555542
Q ss_pred HHHHHHHHHHHHHHHHHhhcccccchhHHHHHHHHHHHHHHHHHHhhhhhhhhhhccceEEEecCCCChhhhhhhhhHHH
Q 011118 92 TQNLSFIVAGVSVITLLFFSSLKSTNFIAFVLLVILTNISGAVGVISTLAGTILIEREWVVVISEGHPPEALTKMNSIIR 171 (493)
Q Consensus 92 ~q~~~v~~s~~~~~~~l~~~~~~~~~~~~~~~l~~~~~~~g~~~~l~~~a~~iaieRDWvv~i~~~~~~~~L~~~Na~mr 171 (493)
+-.+. | +.+.. .. . ++.+..+.++.+++|..+.-|+++...+ -.|-| +++.+.=...|..=+
T Consensus 88 l~~IP----~---~~~~~-a~-~---~~~~~~ll~~gll~G~~GasFav~m~~~--s~~fP----~~~qG~AlGI~g~GN 149 (417)
T COG2223 88 LLLIP----C---LGLAF-AV-T---YPSTWQLLVIGLLLGLAGASFAVGMPNA--SFFFP----KEKQGLALGIAGAGN 149 (417)
T ss_pred HHHHH----H---HHHHH-Hc-c---CCchHHHHHHHHHHhcccceehcccccc--cccCC----hhhhhHHHHHhcccc
Confidence 21111 1 11111 01 1 1111344444556777776666563322 23443 222122223344112
Q ss_pred hHHHHHHhhhhHHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCcchhhhhhhhccCCCcccccccCCccc
Q 011118 172 RIDLTCKLLAPAITGFIISFVSLQASAMTLAIWTTVTVWVEYWLFMSVYKGIPALAESSQRRIRRSMPIDMEQSTSMPRE 251 (493)
Q Consensus 172 riDl~~~l~gP~~~G~l~~~~s~~~a~~~i~~~n~~S~~ve~~~l~~Vy~~~p~L~~~~~~~~~~~~~~~~~~~~~~~~~ 251 (493)
-=-.+.++++|.++...-.. ..+.++.+-+..-++..+.-... -+..|+.+.+ +++..+
T Consensus 150 ~G~av~q~~~P~v~~~~g~~-~w~~~~~i~~~~l~v~~v~~~~~----~~d~p~~r~~---------~~~~~~------- 208 (417)
T COG2223 150 LGVAVAQLVAPLVAVAFGFL-AWRNVAGIYVVALAIAAVLAWLG----MNDVPEHRAS---------VKPQLP------- 208 (417)
T ss_pred ccHHHHHHHHHHHHHHHhhH-HHHHHHHHHHHHHHHHHHHHHHH----hCCChhhhcc---------ccccch-------
Confidence 22467788888887665320 13333333223333333222222 2233432100 000000
Q ss_pred cccccccccchhHHHHHHHHHHHHhhhccccccccceeeeccc-chHHHHHHHHHHHH----hhhhhhHHHHHHHH-cCC
Q 011118 252 RESLLSHDENNAELAEKRWRWKIIDWISNAPCVGAWQVYLKQE-VVLPGVSLALLFFT----VLSFGTLMTATLEW-EGI 325 (493)
Q Consensus 252 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~y~~q~-v~la~~alalLy~t----VL~f~~l~~~yl~~-~gl 325 (493)
.+. +..++++ +++ ++++|+- ..+|+....-|+++ =|+
T Consensus 209 -------------~~~--------------------~~v~~~~~~W~----lsllY~~tFG~Fvgfs~~l~~~~~~~fg~ 251 (417)
T COG2223 209 -------------AQL--------------------KAVFSNKDTWL----LSLLYFATFGGFVGFSAYLPMYLVTQFGL 251 (417)
T ss_pred -------------hHH--------------------HHHhcCcchHH----HHHHHHHHHHHHHHHHHHHHHHHHHhcCC
Confidence 000 1111222 333 4666643 35688899999995 699
Q ss_pred CchHHHHHHHHHHHHHHHHHHHHHHHHhhhchhhhhHHHHHHHHHHHHHHHHHHhh------cchHHHHHHHHHHHHhhh
Q 011118 326 PAYIIGIARGISATIGIAATILYPILQSRISTLRTGLWSIWSQWFCLLICVASIWI------HNSLVAAYMLMVGVATSR 399 (493)
Q Consensus 326 s~~~iG~~r~~~av~GllgT~~~~~l~~riGl~r~g~~~~~~q~~~L~~~v~~~~~------~~~~~s~~~l~~gi~~SR 399 (493)
++..-|.+-..++..|-+.=-+.+++..|+|-.|.-++..+. .++...+++... ++.......++.-.+++.
T Consensus 252 ~~~~Ag~~a~~f~~~g~l~Rp~GG~LsDR~Gg~rv~~~~f~~--~~~~~~~l~~~~~~~~~~~~~~~~~~~~l~l~~~~G 329 (417)
T COG2223 252 SPVTAGLIAFLFPLIGALARPLGGWLSDRIGGRRVTLAVFVG--MALAAALLSLFLTGFGHGGSFVVFVAVFLALFVFAG 329 (417)
T ss_pred ChhhHHHHHHHHHHHHHHHHhccchhhhhccchhHHHHHHHH--HHHHHHHHHccccccccCcchHHHHHHHHHHHHHhc
Confidence 999999888888888888888889999999999988876652 122222333322 112223333343344444
Q ss_pred chhhhhhhhhhhhhhccCCCCcchhHHHHHHHHHHhh-HHHHHHHHHhc-cCCCCchHHHHHHHHHHHHHHHHHHHHHH
Q 011118 400 LGLWMFDLSVIQQMQDLVPESDRCVVGGVQNSLQSTM-DLMAYTMGIII-SNPQDFWKLILISVIVVTLAAILYTFHLY 476 (493)
Q Consensus 400 ~GLw~fDl~~~~l~Qe~vp~~~rG~v~gv~~sl~~~f-~l~~~~~~ii~-~~p~~F~~l~~~S~~~V~~~~~l~~~~~~ 476 (493)
+| |=++-+++=.. -+++-|.|+|...+.-.+- -.+....+... ...+.....++.....+.+..+.+..|.|
T Consensus 330 ~G----nGsvfk~Ip~i-f~~~~G~v~G~vga~G~lGGf~lp~~~g~~~~~tg~~~~~f~~~~~~~~~a~v~~~~~y~r 403 (417)
T COG2223 330 LG----NGSVFKMIPVI-FPKETGAVTGIVGAIGGLGGFFLPLAFGVSLDLTGSYTGAFMLLLAFYLVALVLTWALYAR 403 (417)
T ss_pred cC----cchheeechHH-HHhhhhHHHHHHHHhccccccchhHHHHHHHHhcccHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 43 22222222221 1236788888877776554 22222333333 33346666676766666655555656644
No 129
>KOG2532 consensus Permease of the major facilitator superfamily [Carbohydrate transport and metabolism]
Probab=97.58 E-value=0.036 Score=60.07 Aligned_cols=359 Identities=13% Similarity=0.054 Sum_probs=206.9
Q ss_pred hHHHHHHHHHHHHHHHhhhccceeeecccchhHHHHHHHHHHHHHHHHHHHHHHHHHhhcccccchhHHHHHHHHHHHHH
Q 011118 52 LLFAAIYGAVESASIALFGPIVGHWVDKLTYVKVLQIWLVTQNLSFIVAGVSVITLLFFSSLKSTNFIAFVLLVILTNIS 131 (493)
Q Consensus 52 ll~~sv~gl~~~l~~llfg~~vG~~vDr~~R~~v~~~~~~~q~~~v~~s~~~~~~~l~~~~~~~~~~~~~~~l~~~~~~~ 131 (493)
.-.-+..--+.....++---++|.++||++-|+++..+.+.-.++ .++.|..+....+. ++++=.+-
T Consensus 72 ~~~k~~i~ss~~~G~i~~~iP~g~l~~k~G~r~v~~~~~~~sa~~---------t~l~P~aa~~~~~~----~~~~R~lq 138 (466)
T KOG2532|consen 72 STEKGLIFSSFFWGYILGQIPGGYLADKFGARRVFFISGLISALL---------TLLTPLAASIGFYL----LLVLRFLQ 138 (466)
T ss_pred HHHHHHHHHHHHHHHHHHHcCcHHHHHHcCchHHHHHHHHHHHHH---------HHHHHHHHHhcchh----hHHHHHHh
Confidence 344455556677778888888999999999999887776333222 22333111222221 12222344
Q ss_pred HHHHHhhhhhhhhhhccceEEEecCCCChhhhhhhhhHHHhHHHHHHhhhhHHHHHHHHh-hhhHHHHHHHHHHHHHHHH
Q 011118 132 GAVGVISTLAGTILIEREWVVVISEGHPPEALTKMNSIIRRIDLTCKLLAPAITGFIISF-VSLQASAMTLAIWTTVTVW 210 (493)
Q Consensus 132 g~~~~l~~~a~~iaieRDWvv~i~~~~~~~~L~~~Na~mrriDl~~~l~gP~~~G~l~~~-~s~~~a~~~i~~~n~~S~~ 210 (493)
|..+...-++ .-.+...|.| . .+..+.=+.+-.--+...+.+=.++|.+.+. .|.+....+.++.-.+-+
T Consensus 139 Gl~~g~~~pa-~~~i~~~W~P----~---~Ers~~~ail~~g~q~g~v~~mp~sg~lc~s~~GW~sifY~~g~~g~i~~- 209 (466)
T KOG2532|consen 139 GLGQGVLFPA-IGSILAKWAP----P---NERSTFIAILTAGSQLGTIITMPVSGLLCESSLGWPSIFYVFGIVGLIWF- 209 (466)
T ss_pred HHHHhHHHhh-hhceeeeECC----H---HHHHHHHHHHHHHHHHHHHHHHHhHHHHhccCCCCchHHHHHHHHHHHHH-
Confidence 5444444444 4556778875 2 2344455555555577777777777888776 676555443333333322
Q ss_pred HHHHHHHHHHhhcCcchhh--hhhhhccCCCcccccccCCccccccccccccchhHHHHHHHHHHHHhhhccccccccce
Q 011118 211 VEYWLFMSVYKGIPALAES--SQRRIRRSMPIDMEQSTSMPRERESLLSHDENNAELAEKRWRWKIIDWISNAPCVGAWQ 288 (493)
Q Consensus 211 ve~~~l~~Vy~~~p~L~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~ 288 (493)
..+ ..+|..-|+-+.. +++.+. ..+...++-.++...-.|+
T Consensus 210 --~~w-~~~~~d~P~~h~~is~~El~~----------------------------------I~~~k~~~~~~~~~~vP~~ 252 (466)
T KOG2532|consen 210 --ILW-FLFYSDSPSKHPNISEKELKY----------------------------------IEKGKSEAHVKKKPPVPYK 252 (466)
T ss_pred --HHH-HHHhcCCcccCCCCCHHHHHH----------------------------------HHhcccccccCCCCCCCHH
Confidence 222 3345555543210 000000 0000000000000134688
Q ss_pred eeecccchHHHHHHHHHHHH-hhhhhhHHHHHHHH-cCCCchHHHHHHHHHHHHHHHHHHHHHHHHhhh---chhhhhHH
Q 011118 289 VYLKQEVVLPGVSLALLFFT-VLSFGTLMTATLEW-EGIPAYIIGIARGISATIGIAATILYPILQSRI---STLRTGLW 363 (493)
Q Consensus 289 ~y~~q~v~la~~alalLy~t-VL~f~~l~~~yl~~-~gls~~~iG~~r~~~av~GllgT~~~~~l~~ri---Gl~r~g~~ 363 (493)
..+++|.+++.....+-++. ..-+-.-+++|+++ +|++-..-|.+-++=-+.-..-.++++.+..++ ++-.+...
T Consensus 253 ~i~ts~~vwai~~~~f~~~~~~~~l~~y~PtY~~~VL~f~v~~~G~~salP~l~~~~~k~~~g~lsD~l~~~~ls~t~~r 332 (466)
T KOG2532|consen 253 AILTSPPVWAIWISAFGGNWGFYLLLTYLPTYLKEVLGFDVRETGFLSALPFLAMAIVKFVAGQLSDRLTFRILSETTVR 332 (466)
T ss_pred HHHcCHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHhCCChhhhhHHHHHHHHHHHHHHHHHHHHHHHHhhccCchHhHH
Confidence 88999999998888877643 34466778899997 999988888888776666666666666655544 33222211
Q ss_pred HHHHHHH-HHHHHHHHH---hhc--chHHHHHHHHHHHHhhhchhhhhhhhhhhhhhccCCCCcchhHHHHHHHHHHhh-
Q 011118 364 SIWSQWF-CLLICVASI---WIH--NSLVAAYMLMVGVATSRLGLWMFDLSVIQQMQDLVPESDRCVVGGVQNSLQSTM- 436 (493)
Q Consensus 364 ~~~~q~~-~L~~~v~~~---~~~--~~~~s~~~l~~gi~~SR~GLw~fDl~~~~l~Qe~vp~~~rG~v~gv~~sl~~~f- 436 (493)
-+ ++.+ +..+++... +.+ ....++..+..++.++.+-.-+|..+.+.. -+++-|.+.|+.+....+.
T Consensus 333 ki-fn~i~~~~~ai~l~~l~~~~~~~~~~a~~~l~~~~~~~g~~~~Gf~~~~~~~-----apq~a~~l~g~~~~~~~~~~ 406 (466)
T KOG2532|consen 333 KI-FNTIAFGGPAVFLLVLAFTSDEHRLLAVILLTIAIGLSGFNISGFYKNHQDI-----APQHAGFVMGIINFVGALAG 406 (466)
T ss_pred HH-HHhHHHHHHHHHHHeeeecCCCcchHHHHHHHHHHHHcccchhhhHhhhhhc-----cchHHHHHHHHHHHHHHHHH
Confidence 11 1222 233333322 222 223566666666777766666666655432 5667899999999999998
Q ss_pred HHHHHHHHHhcc--CCCCchHHHHHHHHHHHHHHHHHHHHH
Q 011118 437 DLMAYTMGIIIS--NPQDFWKLILISVIVVTLAAILYTFHL 475 (493)
Q Consensus 437 ~l~~~~~~ii~~--~p~~F~~l~~~S~~~V~~~~~l~~~~~ 475 (493)
-+..++.+.+.+ ++++-.+.-++..+....+...|..|.
T Consensus 407 ~~~P~~vg~~~~~~t~~eW~~VF~i~a~i~~~~~i~f~~f~ 447 (466)
T KOG2532|consen 407 FIAPLLVGIIVTDNTREEWRIVFLIAAGILIVGNIIFLFFG 447 (466)
T ss_pred HHHHHheeeEeCCCCHHHHHHHHHHHHHHHHHhchheeEee
Confidence 466666677775 245777788888888888887877774
No 130
>TIGR00711 efflux_EmrB drug resistance transporter, EmrB/QacA subfamily. This subfamily of drug efflux proteins, a part of the major faciliator family, is predicted to have 14 potential membrane-spanning regions. Members with known activities include EmrB (multiple drug resistance efflux pump) in E. coli, FarB (antibacterial fatty acid resistance) in Neisseria gonorrhoeae, TcmA (tetracenomycin C resistance) in Streptomyces glaucescens, etc. In most cases, the efflux pump is described as having a second component encoded in the same operon, such as EmrA of E. coli.
Probab=97.56 E-value=0.0029 Score=67.28 Aligned_cols=129 Identities=13% Similarity=-0.032 Sum_probs=92.5
Q ss_pred hHHHHHHHHcCCCchHHHHHHHHHHHHHHHHHHHHHHHHhhhchhhhhHHHHHHHHHHHHHHHHHHhhcchHHHHHHHHH
Q 011118 314 TLMTATLEWEGIPAYIIGIARGISATIGIAATILYPILQSRISTLRTGLWSIWSQWFCLLICVASIWIHNSLVAAYMLMV 393 (493)
Q Consensus 314 ~l~~~yl~~~gls~~~iG~~r~~~av~GllgT~~~~~l~~riGl~r~g~~~~~~q~~~L~~~v~~~~~~~~~~s~~~l~~ 393 (493)
.....+..+.|.++..+|...+...++..++..+++++.+|+|..|...++.... ....+.....+ +...++.
T Consensus 23 ~~~p~~~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~---~~~~~~~~~~~----~~~~l~~ 95 (485)
T TIGR00711 23 VAIPTIAGDLGSSLSQVQWVITSYMLANAISIPLTGWLAKRFGTRRLFLISTFAF---TLGSLLCGVAP----NLELMII 95 (485)
T ss_pred HHHHHHHHhcCCChhhhhHHHHHHHHHHHHHHHhHHHHHHHhCcHHHHHHHHHHH---HHHHHHHhCcC----CHHHHHH
Confidence 3455555679999999999999999999999999999999999888776655422 22222222222 2233444
Q ss_pred HHHhhhchhhhhhhhhhhhhhccCCCCcchhHHHHHHHHHHhh-HHHHHHHHHhccC
Q 011118 394 GVATSRLGLWMFDLSVIQQMQDLVPESDRCVVGGVQNSLQSTM-DLMAYTMGIIISN 449 (493)
Q Consensus 394 gi~~SR~GLw~fDl~~~~l~Qe~vp~~~rG~v~gv~~sl~~~f-~l~~~~~~ii~~~ 449 (493)
+.++..+|.-..+.....++.|..|+++||+..|...+...+. -++..+.+.+...
T Consensus 96 ~~~~~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~ 152 (485)
T TIGR00711 96 FRVIQGFGGGPLIPLSFSTLLNIYPPEKRGRAMAIWGLTVLVAPALGPTLGGWIIEN 152 (485)
T ss_pred HHHHHHhhhhhHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHhhhhhccHhHhccC
Confidence 5555556666678888999999999999999999988877776 4555555665543
No 131
>PRK10504 putative transporter; Provisional
Probab=97.55 E-value=0.0045 Score=65.98 Aligned_cols=132 Identities=10% Similarity=-0.066 Sum_probs=89.3
Q ss_pred hhhhHHHHHHHHcCCCchHHHHHHHHHHHHHHHHHHHHHHHHhhhchhhhhHHHHHHHHHHHHHHHHHHhhcchHHHHHH
Q 011118 311 SFGTLMTATLEWEGIPAYIIGIARGISATIGIAATILYPILQSRISTLRTGLWSIWSQWFCLLICVASIWIHNSLVAAYM 390 (493)
Q Consensus 311 ~f~~l~~~yl~~~gls~~~iG~~r~~~av~GllgT~~~~~l~~riGl~r~g~~~~~~q~~~L~~~v~~~~~~~~~~s~~~ 390 (493)
.+...+..|.++.|.++...|...+...++...+..+.+++.+|+|..|...++...-.++. +...+.+ +...
T Consensus 28 ~~~~~~p~~~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~d~~g~r~~~~~~~~~~~~~~---~~~~~~~-~~~~--- 100 (471)
T PRK10504 28 IVNTALPSMAQSLGESPLHMHMVIVSYVLTVAVMLPASGWLADRVGVRNIFFTAIVLFTLGS---LFCALSG-TLNE--- 100 (471)
T ss_pred HHHHHHHHHHHHhCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhchHHHHHHHHHHHHHHH---HHHHHhC-CHHH---
Confidence 45567888888999999999999999888888999999999999998887665543221111 1112222 2111
Q ss_pred HHHHHHhhhchhhhhhhhhhhhhhccCCCCcchhHHHHHHHHHHhh-HHHHHHHHHhccC
Q 011118 391 LMVGVATSRLGLWMFDLSVIQQMQDLVPESDRCVVGGVQNSLQSTM-DLMAYTMGIIISN 449 (493)
Q Consensus 391 l~~gi~~SR~GLw~fDl~~~~l~Qe~vp~~~rG~v~gv~~sl~~~f-~l~~~~~~ii~~~ 449 (493)
+..+.++..+|.-.+-.....+.++..|+++|++..|+.+...++. -++..+.+.+...
T Consensus 101 l~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~g~l~~~ 160 (471)
T PRK10504 101 LLLARVLQGVGGAMMVPVGRLTVMKIVPREQYMAAMTFVTLPGQVGPLLGPALGGLLVEY 160 (471)
T ss_pred HHHHHHHHHhhhHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHhh
Confidence 2222333334443344556777888999999999999988777666 4555666666543
No 132
>PRK03699 putative transporter; Provisional
Probab=97.54 E-value=0.0075 Score=62.96 Aligned_cols=129 Identities=12% Similarity=0.068 Sum_probs=83.8
Q ss_pred hhhhhHHHHHHHHcCCCchHHHHHHHHHHHHHHHHHHHHHHHHhhhchhhhhHHHHHHHHHHHHHHHHHHhhcchH-HHH
Q 011118 310 LSFGTLMTATLEWEGIPAYIIGIARGISATIGIAATILYPILQSRISTLRTGLWSIWSQWFCLLICVASIWIHNSL-VAA 388 (493)
Q Consensus 310 L~f~~l~~~yl~~~gls~~~iG~~r~~~av~GllgT~~~~~l~~riGl~r~g~~~~~~q~~~L~~~v~~~~~~~~~-~s~ 388 (493)
..++.++..+..+.|+++.++|...+...++..++.++.+++.+|+|..|...++... +...+....+.++.. ..+
T Consensus 24 ~~~g~~~~~i~~~~~~s~~~~g~~~s~~~~~~~i~~~~~g~l~dr~g~r~~~~~~~~~---~~i~~~l~~~~~~~~~~~~ 100 (394)
T PRK03699 24 IVTGMVMGPIAEYFNLPVSSMSNTFTFLNAGILISIFLNAWLMEIIPLKRQLIFGFAL---MILAVAGLMFSHSLALFSI 100 (394)
T ss_pred HHHhhhhHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHH---HHHHHHHHHHcchHHHHHH
Confidence 4577778877778999999999999999999999999999999999988877665542 222222222232111 111
Q ss_pred HHHHHHHHhhhchhhhhhhhhhhhhhccCCCCcchhHHHHHHHHHHhh-HHHHHHHHHh
Q 011118 389 YMLMVGVATSRLGLWMFDLSVIQQMQDLVPESDRCVVGGVQNSLQSTM-DLMAYTMGII 446 (493)
Q Consensus 389 ~~l~~gi~~SR~GLw~fDl~~~~l~Qe~vp~~~rG~v~gv~~sl~~~f-~l~~~~~~ii 446 (493)
..++.|+. .-........++.+..|+++||+..+...+...+. -+...+.+.+
T Consensus 101 ~~~l~G~~-----~g~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l 154 (394)
T PRK03699 101 AMFVLGVV-----SGITMSIGTFLITHVYEGKQRGSRLLFTDSFFSMAGMIFPIIAAYL 154 (394)
T ss_pred HHHHHHHh-----hHhhccchhHHhhhhcccchHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 22223322 22223455677788889999999988776655444 3334444443
No 133
>TIGR00886 2A0108 nitrite extrusion protein (nitrite facilitator).
Probab=97.52 E-value=0.0056 Score=62.38 Aligned_cols=133 Identities=14% Similarity=0.117 Sum_probs=85.4
Q ss_pred HHhhhhhhHHHHHHH-HcCCCchHHHHHHHHHHHHHHHHHHHHHHHHhhhchhhhhHHHHHHHHHHHHHHHHHHhhcchH
Q 011118 307 FTVLSFGTLMTATLE-WEGIPAYIIGIARGISATIGIAATILYPILQSRISTLRTGLWSIWSQWFCLLICVASIWIHNSL 385 (493)
Q Consensus 307 ~tVL~f~~l~~~yl~-~~gls~~~iG~~r~~~av~GllgT~~~~~l~~riGl~r~g~~~~~~q~~~L~~~v~~~~~~~~~ 385 (493)
++...+....+.|+. +.|+++..+|.+.++..++...+....+++.+|+|..|.-.++... +....+...+.+.+.
T Consensus 15 ~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~---~~i~~~~~~~~~~~~ 91 (366)
T TIGR00886 15 SVWFAFSPLAVQMIKDDLGLSTAQLGNLVAVPVLAGAVLRIILGFLVDKFGPRYTTTLSLLL---LAIPCLWAGLAVQSY 91 (366)
T ss_pred HHHHHhHHhhhHHHHHHhCCCHHHhhHhhHHHHHHHHHHHHHHHHHHHHhCchHHHHHHHHH---HHHHHHHHHHHhhhH
Confidence 334456677775565 6999999999999999999999999999999999988877666542 222222222222011
Q ss_pred HHHHHHHHHHHhhhchhhhhhhhhhhhhhccCCCCcchhHHHHHHHHHHhh-HHHHHHHHHh
Q 011118 386 VAAYMLMVGVATSRLGLWMFDLSVIQQMQDLVPESDRCVVGGVQNSLQSTM-DLMAYTMGII 446 (493)
Q Consensus 386 ~s~~~l~~gi~~SR~GLw~fDl~~~~l~Qe~vp~~~rG~v~gv~~sl~~~f-~l~~~~~~ii 446 (493)
+ .++.+-++..+|--.+ .....++-+..|+++||+..+...+.++.. -++..+.+.+
T Consensus 92 ~---~~~~~~~~~g~~~~~~-~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~i~~~l 149 (366)
T TIGR00886 92 S---VLLLLRLFIGIAGGSF-ASCMPWISFFFPKKIQGTALGLAAGWGNMGGGVAQFVMPPI 149 (366)
T ss_pred H---HHHHHHHHHHHhchhh-HhHHHHHHHhcCHhhhhHHHHHHHHHhHHHHHHHHHHHHHH
Confidence 1 1112222222221123 345667888899999999999988766655 4444444433
No 134
>PRK03893 putative sialic acid transporter; Provisional
Probab=97.48 E-value=0.0084 Score=64.23 Aligned_cols=127 Identities=13% Similarity=-0.001 Sum_probs=88.5
Q ss_pred HHHHHHHHcCCCchHHHHHHHHHHHHHHHHHHHHHHHHhhhchhhhhHHHHHHHHHHHHHHHHHHhhcchHHHHHHHHHH
Q 011118 315 LMTATLEWEGIPAYIIGIARGISATIGIAATILYPILQSRISTLRTGLWSIWSQWFCLLICVASIWIHNSLVAAYMLMVG 394 (493)
Q Consensus 315 l~~~yl~~~gls~~~iG~~r~~~av~GllgT~~~~~l~~riGl~r~g~~~~~~q~~~L~~~v~~~~~~~~~~s~~~l~~g 394 (493)
....+..+.|+++...|.+.+...++...+.+..+++.+|+|..|...++.. .+...++...+.+ + ...+..+
T Consensus 42 ~~~~i~~~~~~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~---~~~~~~~~~~~~~-~---~~~l~~~ 114 (496)
T PRK03893 42 VLTEVQGEFGLTTVQAASLISAAFISRWFGGLLLGAMGDRYGRRLAMVISIV---LFSVGTLACGFAP-G---YWTLFIA 114 (496)
T ss_pred HHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcHHHHHHHHH---HHHHHHHHHHHHh-H---HHHHHHH
Confidence 3344444689999999999999999999999999999999998887665553 2222222222222 1 2223333
Q ss_pred HHhhhchhhhhhhhhhhhhhccCCCCcchhHHHHHHHHHHhh-HHHHHHHHHhcc
Q 011118 395 VATSRLGLWMFDLSVIQQMQDLVPESDRCVVGGVQNSLQSTM-DLMAYTMGIIIS 448 (493)
Q Consensus 395 i~~SR~GLw~fDl~~~~l~Qe~vp~~~rG~v~gv~~sl~~~f-~l~~~~~~ii~~ 448 (493)
.++..++.-..+.+...+++|..|+++||+.+|...+.+++. -++..+.+.+.+
T Consensus 115 ~~l~G~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~ 169 (496)
T PRK03893 115 RLVIGMGMAGEYGSSATYVIESWPKHLRNKASGFLISGFSIGAVVAAQVYSLVVP 169 (496)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhc
Confidence 444445555668888899999999999999999998887777 444445555543
No 135
>PRK11902 ampG muropeptide transporter; Reviewed
Probab=97.46 E-value=0.0082 Score=62.82 Aligned_cols=140 Identities=16% Similarity=0.016 Sum_probs=86.7
Q ss_pred HHHHHHHh---hh-hhhHHHHHHHHcCCCchHHHHHHHHHHHHHHHHHHHHHHHHhhh-----chhhh-hHHHHHHHHHH
Q 011118 302 LALLFFTV---LS-FGTLMTATLEWEGIPAYIIGIARGISATIGIAATILYPILQSRI-----STLRT-GLWSIWSQWFC 371 (493)
Q Consensus 302 lalLy~tV---L~-f~~l~~~yl~~~gls~~~iG~~r~~~av~GllgT~~~~~l~~ri-----Gl~r~-g~~~~~~q~~~ 371 (493)
+..||+.- .+ +...+..|++++|+|..++|.+..++.. ....++.+++..|+ |-.|. -.++ +..+
T Consensus 4 ~~~l~~~~~~~~~~~~~~~~~~l~~~g~~~~~ig~~~~~~~~--~~~~~l~g~~~Dr~~~~~~g~rr~~l~~~---~~~~ 78 (402)
T PRK11902 4 MLLLGFASGLPLALTSGTLQAWMTVEGLDIQTIGFFSLVGQA--YIFKFLWAPLMDRYTPPLLGRRRGWLLLT---QVGL 78 (402)
T ss_pred HHHHHHHHhhhHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHH--HHHHHHHHHHHHcccccCCCcchhHHHHH---HHHH
Confidence 45667531 23 4457888999999999999999888887 58889999999999 54432 2222 2222
Q ss_pred HHHHHHHHhhcchHHHHHHHHHHHHhhhchhhhhhhhhhhhhhccCCCCcchhHHHHHHHHHHhhH-HHHHHHHHhc
Q 011118 372 LLICVASIWIHNSLVAAYMLMVGVATSRLGLWMFDLSVIQQMQDLVPESDRCVVGGVQNSLQSTMD-LMAYTMGIII 447 (493)
Q Consensus 372 L~~~v~~~~~~~~~~s~~~l~~gi~~SR~GLw~fDl~~~~l~Qe~vp~~~rG~v~gv~~sl~~~f~-l~~~~~~ii~ 447 (493)
....+...+.+ +..+...++...++..++--..|+....+.-|.+|+++||+.++....-+++.. ++..+.+.+.
T Consensus 79 ~l~~~~l~~~~-~~~~~~~l~~~~~~~~~~~~~~~~~~~al~~~~~~~~~r~~~~~~~~~g~~~g~i~g~~l~~~l~ 154 (402)
T PRK11902 79 AASIAAMAFCP-PHAALWPLAGLAVLVAFLSASQDIVFDAYSTDVLHPEERGAGAAVKVLGYRLAMLVSGGLALWLA 154 (402)
T ss_pred HHHHHHHHhcC-ccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcChhhhhHHHHHHHHHHHHHHHHHhHHHHHHH
Confidence 21111212222 111222122221112244556899999999999999999999999987666553 3333333443
No 136
>PRK10213 nepI ribonucleoside transporter; Reviewed
Probab=97.45 E-value=0.0092 Score=62.60 Aligned_cols=128 Identities=17% Similarity=0.075 Sum_probs=88.2
Q ss_pred hhHHHHHHHHcCCCchHHHHHHHHHHHHHHHHHHHHHHHHhhhchhhhhHHHHHHHHHHHHHHHHHHhhcchHHHHHHHH
Q 011118 313 GTLMTATLEWEGIPAYIIGIARGISATIGIAATILYPILQSRISTLRTGLWSIWSQWFCLLICVASIWIHNSLVAAYMLM 392 (493)
Q Consensus 313 ~~l~~~yl~~~gls~~~iG~~r~~~av~GllgT~~~~~l~~riGl~r~g~~~~~~q~~~L~~~v~~~~~~~~~~s~~~l~ 392 (493)
.+++..+.++.|.++.++|...++..++..++....+++.+|+|..|...++..... ...+...+.+ +.+ .+.
T Consensus 40 ~~~l~~~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~Dr~grr~~~~~~~~~~~---~~~~~~~~~~-~~~---~l~ 112 (394)
T PRK10213 40 VSLLTPMAQDLGISEGVAGQSVTVTAFVAMFASLFITQTIQATDRRYVVILFAVLLT---LSCLLVSFAN-SFS---LLL 112 (394)
T ss_pred HhhHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHhcccCcHHHHHHHHHHHH---HHHHHHHHHC-hHH---HHH
Confidence 345667777899999999999999999999999999999999999888777765322 2222222222 222 222
Q ss_pred HHHHhhhchhhhhhhhhhhhhhccCCCCcchhHHHHHHHHHHhh-HHHHHHHHHhc
Q 011118 393 VGVATSRLGLWMFDLSVIQQMQDLVPESDRCVVGGVQNSLQSTM-DLMAYTMGIII 447 (493)
Q Consensus 393 ~gi~~SR~GLw~fDl~~~~l~Qe~vp~~~rG~v~gv~~sl~~~f-~l~~~~~~ii~ 447 (493)
..-++..++.-.+-.....+..+.+|+++||+.++...+..++. -++..+.+.+.
T Consensus 113 ~~r~l~G~~~g~~~~~~~~~i~~~~~~~~~~~a~~~~~~~~~~g~~ig~~l~~~l~ 168 (394)
T PRK10213 113 IGRACLGLALGGFWAMSASLTMRLVPPRTVPKALSVIFGAVSIALVIAAPLGSFLG 168 (394)
T ss_pred HHHHHHHHhhHHHHHHHHHHHHHHcCHhHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 22222233333345667778889999999999999988877766 34455555554
No 137
>TIGR00806 rfc RFC reduced folate carrier. Proteins of the RFC family are so-far restricted to animals. RFC proteins possess 12 putative transmembrane a-helical spanners (TMSs) and evidence for a 12 TMS topology has been published for the human RFC. The RFC transporters appear to transport reduced folate by an energy-dependent, pH-dependent, Na+-independent mechanism. Folate:H+ symport, folate:OH- antiport and folate:anion antiport mechanisms have been proposed, but the energetic mechanism is not well defined.
Probab=97.45 E-value=0.079 Score=57.47 Aligned_cols=133 Identities=13% Similarity=-0.025 Sum_probs=84.4
Q ss_pred HHHHHHHHHHHhCCCchHH-HHHHHHHHHHHHHhhhccceeeecccchhHHHHHHHHHHHHHHHHHHHHHHHHHhhcccc
Q 011118 36 WEFSVGLYMISVWPDSLLF-AAIYGAVESASIALFGPIVGHWVDKLTYVKVLQIWLVTQNLSFIVAGVSVITLLFFSSLK 114 (493)
Q Consensus 36 ~~Fa~~L~lv~l~~~sll~-~sv~gl~~~l~~llfg~~vG~~vDr~~R~~v~~~~~~~q~~~v~~s~~~~~~~l~~~~~~ 114 (493)
..|+.|-+ ..-++=|.-. .+...-+-+.+..++..++|.+.||.+-|+++....+.-.+. +++ . ..
T Consensus 45 ~s~a~p~L-~~elglT~~qv~G~I~s~F~ysYal~qIp~GlLaDrlG~K~vL~l~~l~Wsl~----t~L--~-~f----- 111 (511)
T TIGR00806 45 ESFITPYL-LTVLNFTEETVTNEIIPVLPYSHLAVLVPVFLLTDYLRYKPVLVLQALSFVCV----WLL--L-LL----- 111 (511)
T ss_pred HHHHHHHH-HHHcCCCHHHhcchHHHHHHHHHHHHHHHHHHHHHHhCchHHHHHHHHHHHHH----HHH--H-HH-----
Confidence 34566653 3344445555 666667778889999999999999999999887665322221 111 1 11
Q ss_pred cchhHHHHHHHHHHHHHHHHHHhhhhhhhhhhccceEEEecCCCChhhhhhhhhHHHhHHHHHHhhhhHHHHHHHHhhhh
Q 011118 115 STNFIAFVLLVILTNISGAVGVISTLAGTILIEREWVVVISEGHPPEALTKMNSIIRRIDLTCKLLAPAITGFIISFVSL 194 (493)
Q Consensus 115 ~~~~~~~~~l~~~~~~~g~~~~l~~~a~~iaieRDWvv~i~~~~~~~~L~~~Na~mrriDl~~~l~gP~~~G~l~~~~s~ 194 (493)
..+ +..+.+.=++.|..+...- +.... --.|+| + ++..++++..+.--.+..++||.+++.+. ..|.
T Consensus 112 a~S---l~~L~i~R~llGvaEA~~~-A~~sy-I~~WfP----~---kER~ratsi~~sg~~vG~~Ia~~L~qll~-s~gW 178 (511)
T TIGR00806 112 GTS---VWHMQLMEVFYSVTMAARI-AYSSY-IFSLVP----P---SRYQRAAAYSRAAVLLGVFLSSVLGQLLV-TLGW 178 (511)
T ss_pred HHH---HHHHHHHHHHHHHHHHHHH-HHHHH-HHHHCC----H---HHHHHHHHHHHHHHHHHHHHHHHHHHHHH-hcCc
Confidence 011 2222222334566665554 43433 345763 2 67899999999999999999999999954 4553
No 138
>TIGR01299 synapt_SV2 synaptic vesicle protein SV2. This model describes a tightly conserved subfamily of the larger family of sugar (and other) transporters described by pfam model pfam00083. Members of this subfamily include closely related forms SV2A and SV2B of synaptic vesicle protein from vertebrates and a more distantly related homolog (below trusted cutoff) from Drosophila melanogaster. Members are predicted to have two sets of six transmembrane helices.
Probab=97.44 E-value=0.0082 Score=68.57 Aligned_cols=119 Identities=10% Similarity=-0.009 Sum_probs=84.2
Q ss_pred hhhHHHHHHHHcCCCchHHHHHHHHHHHHHHHHHHHHHHHHhhhchhhhhHHHHHHHHHHHHHHHHHHhhcchHHHHHHH
Q 011118 312 FGTLMTATLEWEGIPAYIIGIARGISATIGIAATILYPILQSRISTLRTGLWSIWSQWFCLLICVASIWIHNSLVAAYML 391 (493)
Q Consensus 312 f~~l~~~yl~~~gls~~~iG~~r~~~av~GllgT~~~~~l~~riGl~r~g~~~~~~q~~~L~~~v~~~~~~~~~~s~~~l 391 (493)
.+.+++.+..+.|+++...|.+.++..++.++|.++.+++..|+|-.+..+++.... .+.+++..+.+ +...+
T Consensus 186 is~ilp~i~~~~gls~~~~g~l~s~~~lG~iiG~li~G~LsDR~GRR~~lii~lil~---~i~~ll~afa~----s~~~l 258 (742)
T TIGR01299 186 VGFVLPSAEKDLCIPDSGKGMLGLIVYLGMMVGAFFWGGLADKLGRKQCLLICLSVN---GFFAFFSSFVQ----GYGFF 258 (742)
T ss_pred HHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcHHHHHHHHHHH---HHHHHHHHHHh----hHHHH
Confidence 333444444578999999999999999999999999999999999888777665422 22222222332 12233
Q ss_pred HHHHHhhhchhhhhhhhhhhhhhccCCCCcchhHHHHHHHHHHhhH
Q 011118 392 MVGVATSRLGLWMFDLSVIQQMQDLVPESDRCVVGGVQNSLQSTMD 437 (493)
Q Consensus 392 ~~gi~~SR~GLw~fDl~~~~l~Qe~vp~~~rG~v~gv~~sl~~~f~ 437 (493)
+.+-++..+|.-+.-.....++-|..|+++||+..+...+...+..
T Consensus 259 lv~R~l~G~g~g~~~p~~~~~isE~~p~~~Rg~~~g~~~~~~~iG~ 304 (742)
T TIGR01299 259 LFCRLLSGFGIGGAIPIVFSYFAEFLAQEKRGEHLSWLCMFWMIGG 304 (742)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHH
Confidence 3344445555555568888999999999999999998877665543
No 139
>PRK12307 putative sialic acid transporter; Provisional
Probab=97.43 E-value=0.012 Score=61.70 Aligned_cols=111 Identities=11% Similarity=-0.045 Sum_probs=78.1
Q ss_pred HHcCCCchHHHHHHHHHHHHHHHHHHHHHHHHhhhchhhhhHHHHHHHHHHHHHHHHHHhhcchHHHHHHHHHHHHhhhc
Q 011118 321 EWEGIPAYIIGIARGISATIGIAATILYPILQSRISTLRTGLWSIWSQWFCLLICVASIWIHNSLVAAYMLMVGVATSRL 400 (493)
Q Consensus 321 ~~~gls~~~iG~~r~~~av~GllgT~~~~~l~~riGl~r~g~~~~~~q~~~L~~~v~~~~~~~~~~s~~~l~~gi~~SR~ 400 (493)
.+.|+++.+.|...++..++.+++....+++.+|+|..+...++.....+ .+....+.+ +...+..+-.+..+
T Consensus 46 ~~~~~s~~~~~~~~~~~~~~~~l~~~~~g~l~dr~g~r~~l~~~~~~~~~---~~~~~~~~~----~~~~l~~~r~l~G~ 118 (426)
T PRK12307 46 ADLGLTDMEGAFLATAAFIGRPFGGALFGLLADKFGRKPLMMWSIVAYSV---GTGLSGLAS----GVIMLTLSRFIVGM 118 (426)
T ss_pred HHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCChHHHHHHHHHHHH---HHHHHHHHh----HHHHHHHHHHHHHH
Confidence 46899999999999999999999999999999999988777766652222 111222222 12223333334444
Q ss_pred hhhhhhhhhhhhhhccCCCCcchhHHHHHHHHHHhhHH
Q 011118 401 GLWMFDLSVIQQMQDLVPESDRCVVGGVQNSLQSTMDL 438 (493)
Q Consensus 401 GLw~fDl~~~~l~Qe~vp~~~rG~v~gv~~sl~~~f~l 438 (493)
|.-.+..+...++.|..|+++||+.+|...+-..+-.+
T Consensus 119 g~g~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~lg~~ 156 (426)
T PRK12307 119 GMAGEYACASTYAVESWPKHLKSKASAFLVSGFGIGNI 156 (426)
T ss_pred HHhhHHHHHHHHHHHhCCHhHhhHhhhHHHHHHhHHHH
Confidence 44456777888999999999999999987765555433
No 140
>PRK03545 putative arabinose transporter; Provisional
Probab=97.43 E-value=0.0087 Score=62.23 Aligned_cols=126 Identities=10% Similarity=-0.008 Sum_probs=84.1
Q ss_pred HHHHHHHHcCCCchHHHHHHHHHHHHHHHHHHHHHHHHhhhchhhhhHHHHHHHHHHHHHHHHHHhhcchHHHHHHHHHH
Q 011118 315 LMTATLEWEGIPAYIIGIARGISATIGIAATILYPILQSRISTLRTGLWSIWSQWFCLLICVASIWIHNSLVAAYMLMVG 394 (493)
Q Consensus 315 l~~~yl~~~gls~~~iG~~r~~~av~GllgT~~~~~l~~riGl~r~g~~~~~~q~~~L~~~v~~~~~~~~~~s~~~l~~g 394 (493)
+...+.++.|+++.++|...+...++..++....+++.+|+|..|....+.. .+...++...+.+ +.+.. ..+
T Consensus 31 ~~~~l~~~~~~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~---~~~~~~~~~~~~~-~~~~l---~~~ 103 (390)
T PRK03545 31 LLSDIAQSFHMQTAQVGLMLTIYAWVVALMSLPLMLLTSNVERRKLLIGLFV---LFIASHVLSALAW-NFTVL---LIS 103 (390)
T ss_pred chHHHHhHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHcCCChHHHHHHHHH---HHHHHHHHHHHhc-cHHHH---HHH
Confidence 4455566799999999999999998888899999999999998887766554 2222223333333 22222 222
Q ss_pred HHhhhchhhhhhhhhhhhhhccCCCCcchhHHHHHHHHHHhhH-HHHHHHHHhc
Q 011118 395 VATSRLGLWMFDLSVIQQMQDLVPESDRCVVGGVQNSLQSTMD-LMAYTMGIII 447 (493)
Q Consensus 395 i~~SR~GLw~fDl~~~~l~Qe~vp~~~rG~v~gv~~sl~~~f~-l~~~~~~ii~ 447 (493)
-.+..++--.+-.....++.+..|+++||++.|...+.+++.. ++..+.+.+.
T Consensus 104 r~~~G~~~~~~~~~~~~~i~~~~~~~~r~~~~g~~~~~~~~g~~ig~~l~~~l~ 157 (390)
T PRK03545 104 RIGIAFAHAIFWSITASLAIRVAPAGKKAQALSLLATGTALAMVLGLPLGRVIG 157 (390)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhCChhhhhhHHHHHHHHHHHHHHHHhhHHHHHH
Confidence 2222233333445667788889999999999999888777763 3344444444
No 141
>KOG2533 consensus Permease of the major facilitator superfamily [Carbohydrate transport and metabolism]
Probab=97.42 E-value=0.021 Score=62.31 Aligned_cols=305 Identities=12% Similarity=0.061 Sum_probs=152.7
Q ss_pred HHHHHHHHHHHHhhhccceeeecccchhHHHHHHHHHHHHHHHHHHHHHHHHHhhcccccchhHHHHHHHHHHHHHHHHH
Q 011118 56 AIYGAVESASIALFGPIVGHWVDKLTYVKVLQIWLVTQNLSFIVAGVSVITLLFFSSLKSTNFIAFVLLVILTNISGAVG 135 (493)
Q Consensus 56 sv~gl~~~l~~llfg~~vG~~vDr~~R~~v~~~~~~~q~~~v~~s~~~~~~~l~~~~~~~~~~~~~~~l~~~~~~~g~~~ 135 (493)
+....+-.+..+++-.+.|.+.||.|=.+.+-.+.+.=.+...+.|. ..+.+.|. ++=++.|.++
T Consensus 84 ~~~~t~F~v~Yii~~~p~~~L~~r~~ls~~l~~~~~~w~~~~~~~~~------------~~s~~~~i---alr~llGl~e 148 (495)
T KOG2533|consen 84 GVLDTVFYVGYIIGQFPSGLLGDRFPLSKGLSVSGILWGLFGFLTAA------------VHSFPGLI---ALRFLLGLFE 148 (495)
T ss_pred hhHHHHHHHHHHHHHhhHHHHHHhCChHHHHHHHHHHHHHHHHHHHH------------HhhhHHHH---HHHHHHHHHh
Confidence 44455667889999999999999999555554444222222111111 11222222 2234568888
Q ss_pred HhhhhhhhhhhccceEEEecCCCChhhhhhhhhHHHhHHHHHHhhhhHHHHHHHH------hhhhHHHHHHHHHHHHHHH
Q 011118 136 VISTLAGTILIEREWVVVISEGHPPEALTKMNSIIRRIDLTCKLLAPAITGFIIS------FVSLQASAMTLAIWTTVTV 209 (493)
Q Consensus 136 ~l~~~a~~iaieRDWvv~i~~~~~~~~L~~~Na~mrriDl~~~l~gP~~~G~l~~------~~s~~~a~~~i~~~n~~S~ 209 (493)
...-++ .+++-.-|- ++ +++...=+..-.--+++.++|.+++..+.. ..|++...++.+ .+++
T Consensus 149 s~~wP~-~~~~lg~wy----~~---~e~g~r~~~~~a~~~~g~i~ggliA~g~~~~~~~~~~~gW~~~FiI~G---~i~~ 217 (495)
T KOG2533|consen 149 SGGWPG-VVAILGNWY----GK---SERGLRMGIWYASASLGNIFGGLIAYGVFKLNGSGGLAGWRWLFIIEG---VITL 217 (495)
T ss_pred cccchH-HHHHHHhhc----Ch---hhhhhhHHHHHHhcchhhHHHHHHHHHhhhhcCCCCcCCceeehhHHH---HHHH
Confidence 877777 555566676 33 345544445544456667777766666532 234444433222 3344
Q ss_pred HHHHHHHHHHHhhcCcchhhhhhhhccCC---CcccccccCCccccccccccccchhHHHHHHHHHHHHhhhcccccccc
Q 011118 210 WVEYWLFMSVYKGIPALAESSQRRIRRSM---PIDMEQSTSMPRERESLLSHDENNAELAEKRWRWKIIDWISNAPCVGA 286 (493)
Q Consensus 210 ~ve~~~l~~Vy~~~p~L~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~g 286 (493)
+...+. +--.|.-+++.+-.+++++ +++.++.++ ++..++ + -..+
T Consensus 218 ~~gi~~----f~~lp~~P~~~~fl~~~ek~~~~~~~~~~~~------------~~~~~~----~------------~~~~ 265 (495)
T KOG2533|consen 218 VLGIVV----FFFLPDNPSKAWFLTDEEKELVVERLRESPS------------GGIENK----F------------KWKG 265 (495)
T ss_pred HHHheE----EEEecCChhhccccchHHHHHHHHHHHhccC------------CCcccc----c------------CHHH
Confidence 333222 1123432211000000000 000000000 000000 0 0234
Q ss_pred ceeeecccchHHH-HHHHHHHHHhhhhhhHHHHHHHH-cCCCchHHHHHHHHHHHHHHHHHHHHHHHHhhhc--hhhhhH
Q 011118 287 WQVYLKQEVVLPG-VSLALLFFTVLSFGTLMTATLEW-EGIPAYIIGIARGISATIGIAATILYPILQSRIS--TLRTGL 362 (493)
Q Consensus 287 ~~~y~~q~v~la~-~alalLy~tVL~f~~l~~~yl~~-~gls~~~iG~~r~~~av~GllgT~~~~~l~~riG--l~r~g~ 362 (493)
++.-+++|...+. +...+....--++.+-.+.|+++ .|+++...+.+-..-.++|++|+++++.+..|+. ..+-..
T Consensus 266 ~~~a~~dp~vw~~~l~~~~~~lv~~~~~~~lpl~l~~~~~~s~~~a~~ls~~~~~~g~v~~i~ag~lsdr~~~~~~~~~~ 345 (495)
T KOG2533|consen 266 FKEALKDPGVWPFSLCYFFLKLVNYGFSYWLPLYLKSNGGYSELQANLLSTPYDVGGIVGLILAGYLSDRLKTIFARRLL 345 (495)
T ss_pred HHHHHhchhHHHHHHHHHHHhhccccHHHHHHHHHHcCCCcChHHhccccchHHhhhHHHHHHHHHHHHHHhhhHHHHHH
Confidence 4555666644433 22223222223588899999997 7799999999999999999999999999999986 222233
Q ss_pred HHHHHHHHHHHHHHHHHhhcchHHHHHHHHHHHHhhhchhhhhhhhhhhhhhccCCCCcc
Q 011118 363 WSIWSQWFCLLICVASIWIHNSLVAAYMLMVGVATSRLGLWMFDLSVIQQMQDLVPESDR 422 (493)
Q Consensus 363 ~~~~~q~~~L~~~v~~~~~~~~~~s~~~l~~gi~~SR~GLw~fDl~~~~l~Qe~vp~~~r 422 (493)
+...........++...+...+......++.+ ..+++.--.+...-.|.......|
T Consensus 346 ~~~~~~~~~~~g~~~l~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~w~s~~~~g~~k 401 (495)
T KOG2533|consen 346 FIVFLCLYAIIGAISLLAAAVLPGAYGAFLIG----PYGLIATAIIALSWTSANLAGNTK 401 (495)
T ss_pred HHHHHHHHHHHHHHHHHhhccchHHhHHHHhc----chhhHHHHHHHHhhccccccchHH
Confidence 22221111222223323332122222222222 245555566666667777744433
No 142
>TIGR01301 GPH_sucrose GPH family sucrose/H+ symporter. This model represents sucrose/proton symporters, found in plants, from the Glycoside-Pentoside-Hexuronide (GPH)/cation symporter family. These proteins are predicted to have 12 transmembrane domains. Members may export sucrose (e.g. SUT1, SUT4) from green parts to the phloem for long-distance transport or import sucrose (e.g SUT2) to sucrose sinks such as the tap root of the carrot.
Probab=97.41 E-value=0.29 Score=53.26 Aligned_cols=131 Identities=11% Similarity=-0.008 Sum_probs=73.9
Q ss_pred CCCchHHHHHHHHHHHHHHHhhhccceeeecc----cchhHHHHHHHHHHHHHHHHHHHHHHHHHhhccc-------ccc
Q 011118 48 WPDSLLFAAIYGAVESASIALFGPIVGHWVDK----LTYVKVLQIWLVTQNLSFIVAGVSVITLLFFSSL-------KST 116 (493)
Q Consensus 48 ~~~sll~~sv~gl~~~l~~llfg~~vG~~vDr----~~R~~v~~~~~~~q~~~v~~s~~~~~~~l~~~~~-------~~~ 116 (493)
..-+...++..-.+..+..++..|.+|.+.|| ++|||..+..- .+..+++..+ +. ...+.. +..
T Consensus 34 lg~~~~~~~~i~~~~~l~~~i~~Pi~G~lSDr~~sr~GRRrp~il~g---~~~~~~~l~l-l~-~~~~~~~~~~~~~~~~ 108 (477)
T TIGR01301 34 LGIPHAWASIIWLCGPLSGLLVQPLVGYLSDRCTSRFGRRRPFIAAG---AALVAFAVIL-IG-FAADIGHLFGDNLDKK 108 (477)
T ss_pred cCCCHHHHHHHHHHHHHHHHHHHhHeeehhcCCCCCCCChHHHHHHH---HHHHHHHHHH-HH-hCchhhhhcccccccc
Confidence 44577888888889999999999999999995 88998876542 1111111111 11 111000 000
Q ss_pred hhHHHHHHHHHHHHHHHHHHhhhhhhhhhhccceEEEecCCCChhhhhhhhhHHHhHHHHHHhhhhHHHHHH
Q 011118 117 NFIAFVLLVILTNISGAVGVISTLAGTILIEREWVVVISEGHPPEALTKMNSIIRRIDLTCKLLAPAITGFI 188 (493)
Q Consensus 117 ~~~~~~~l~~~~~~~g~~~~l~~~a~~iaieRDWvv~i~~~~~~~~L~~~Na~mrriDl~~~l~gP~~~G~l 188 (493)
........+++.+ ++.-++....+.. -|-.+..++++++ ++....|+...+.-.+..++|++++|..
T Consensus 109 ~~~~~i~~~~i~~---~lld~~~n~~~~p-~rALiaDl~p~~~-~~~~~a~~~~~~~~~lG~ilg~~~g~~~ 175 (477)
T TIGR01301 109 TKPRAIIVFVVGF---WILDVANNMLQGP-CRAFLADLTGGDA-RRTRIANAYFSFFMAIGNVLGYAAGAYS 175 (477)
T ss_pred chhHHHHHHHHHH---HHHHHHHHHHHHH-HHHhcccccCchh-HHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 0001001111110 1111222221222 2444777777643 3456799999999999999999999975
No 143
>PRK09528 lacY galactoside permease; Reviewed
Probab=97.41 E-value=0.0045 Score=65.12 Aligned_cols=77 Identities=19% Similarity=0.284 Sum_probs=63.9
Q ss_pred eeecccchHHHHHHHHHHHHhh-hhhhHHHHHHHH-cCCCchHHHHHHHHHHHHHHHHHHHHHHHHhhhchhhhhHHHH
Q 011118 289 VYLKQEVVLPGVSLALLFFTVL-SFGTLMTATLEW-EGIPAYIIGIARGISATIGIAATILYPILQSRISTLRTGLWSI 365 (493)
Q Consensus 289 ~y~~q~v~la~~alalLy~tVL-~f~~l~~~yl~~-~gls~~~iG~~r~~~av~GllgT~~~~~l~~riGl~r~g~~~~ 365 (493)
+++++|.++.....-+++.... .+.+.+..|+++ .|+++.++|+..++..++..++....+++.+|+|..|...++.
T Consensus 5 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~s~~~~g~~~s~~~l~~~i~~~~~G~l~Dr~g~r~~~~~~~ 83 (420)
T PRK09528 5 YYLKNPNYWIFSLFFFFFFFIWSSWFSFFPIWLHDINGLSGTDTGIIFSANSLFALLFQPLYGLISDKLGLKKHLLWII 83 (420)
T ss_pred hhhcCcchHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCchHHHHHHH
Confidence 3567888877766666665544 467889999996 8999999999999999999999999999999999888776544
No 144
>TIGR00899 2A0120 sugar efflux transporter. This family of proteins is an efflux system for lactose, glucose, aromatic glucosides and galactosides, cellobiose, maltose, a-methyl glucoside and other sugar compounds. They are found in both gram-negative and gram-postitive bacteria.
Probab=97.40 E-value=0.0078 Score=61.43 Aligned_cols=163 Identities=12% Similarity=0.052 Sum_probs=93.6
Q ss_pred hhHHHHHHHHHHHHHhhHHHHHHHHHHHHHhCCCchHHHHHHHHHHHHHHHhhhccceeeecccchhHHHHHHHHHHHHH
Q 011118 17 FLTTYLYVAHFLARWGARMWEFSVGLYMISVWPDSLLFAAIYGAVESASIALFGPIVGHWVDKLTYVKVLQIWLVTQNLS 96 (493)
Q Consensus 17 ~~~~~L~~s~~lS~~Gdr~~~Fa~~L~lv~l~~~sll~~sv~gl~~~l~~llfg~~vG~~vDr~~R~~v~~~~~~~q~~~ 96 (493)
+.++.++...++...+..+.....|.++.+.++.+....+..........+...+..|.+.||++||+++..+.+.-
T Consensus 199 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~g~l~~r~g~~~~~~~~~~~~--- 275 (375)
T TIGR00899 199 RDTRLLFVACTLMWGCNILYIINMPLLIIHELGLPDKLAGLMMGTAAGLEIPFMLLAGYLIKRFGKRRLMLLAALAG--- 275 (375)
T ss_pred cchHHHHHHHHHHHHHHHHHHhhhHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHhHHHHHHHhcchhHHHHHHHHH---
Confidence 44566667776665556666666788887777767666666655555666777788999999999999876654321
Q ss_pred HHHHHHHHHHHHhhcccccchhHHHHHHHHHHHHHHHHHHhhhhhhhhhhccceEEEecCCCChhhhhhhhhHHHhHHHH
Q 011118 97 FIVAGVSVITLLFFSSLKSTNFIAFVLLVILTNISGAVGVISTLAGTILIEREWVVVISEGHPPEALTKMNSIIRRIDLT 176 (493)
Q Consensus 97 v~~s~~~~~~~l~~~~~~~~~~~~~~~l~~~~~~~g~~~~l~~~a~~iaieRDWvv~i~~~~~~~~L~~~Na~mrriDl~ 176 (493)
... +..... ....+..+. +. .+.+.......+.....+ .|.. + ++..+.++........
T Consensus 276 ----~~~-~~~~~~---~~~~~~~~~-~~---~~~g~~~g~~~~~~~~~~-~~~~----~----~~~~~~~~~~~~~~~~ 334 (375)
T TIGR00899 276 ----VAF-YTGLAA---DNSLWALLM-LQ---LLNAIFIGILAGIGMLYF-QDLM----P----GRAGAATTLYTNTGRV 334 (375)
T ss_pred ----HHH-HHHHHH---HHHHHHHHH-HH---HHHHHHHHHHHHHHHHHH-HHhC----c----chhhHHHHHHHHHHHH
Confidence 111 111111 111121111 11 111222222222212221 1212 2 2345778888877888
Q ss_pred HHhhhhHHHHHHHHhhhhHHHHHHHHH
Q 011118 177 CKLLAPAITGFIISFVSLQASAMTLAI 203 (493)
Q Consensus 177 ~~l~gP~~~G~l~~~~s~~~a~~~i~~ 203 (493)
...+||.++|.+.+..|+........+
T Consensus 335 g~~~g~~~~g~~~~~~g~~~~~~~~~~ 361 (375)
T TIGR00899 335 GWIIAGSVGGILAERWSYHAVYWFAIV 361 (375)
T ss_pred HHHHHHHHHHHHHHhccchhHHHHHHH
Confidence 999999999999998886655533333
No 145
>TIGR00924 yjdL_sub1_fam amino acid/peptide transporter (Peptide:H+ symporter), bacterial. The model describes proton-dependent oligopeptide transporters in bacteria. This model is restricted in its range in recognizing bacterial proton-dependent oligopeptide transporters, although they are found in yeast, plants and animals. They function by proton symport in a 1:1 stoichiometry, which is variable in different species. All of them are predicted to contain 12 transmembrane domains, for which limited experimental evidence exists.
Probab=97.38 E-value=0.0094 Score=64.48 Aligned_cols=173 Identities=12% Similarity=0.005 Sum_probs=103.4
Q ss_pred eccc-chHHHHHHHHHH-HHhhhhhhHHHHHHHH---cCCCchHHHHHHHHHHHHHHHHHHHHHHHHhh-hchhhhhHHH
Q 011118 291 LKQE-VVLPGVSLALLF-FTVLSFGTLMTATLEW---EGIPAYIIGIARGISATIGIAATILYPILQSR-ISTLRTGLWS 364 (493)
Q Consensus 291 ~~q~-v~la~~alalLy-~tVL~f~~l~~~yl~~---~gls~~~iG~~r~~~av~GllgT~~~~~l~~r-iGl~r~g~~~ 364 (493)
++|| .+...+...+.. +...+..+.++.|+.+ .|+++...|...+.-++++.++.+..+++..| +|..|+..++
T Consensus 6 ~~~p~~~~~l~~~~~~~~~~~~~~~~~L~~yl~~~~~lg~s~~~ag~~~~~~~~~~~~~~~~~G~laDr~~G~~~~l~~~ 85 (475)
T TIGR00924 6 FGHPKPLFTLFFVELWERFSYYGMQGILAVYLVQQAGLGFSQEQAFIIFGAYSALVYLLTSVGWWFGDRVWGTKKTMVLG 85 (475)
T ss_pred cCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHhhHHHHHHhhcchHHHHHHH
Confidence 4566 333333333443 4444566678889885 69999999999999999999999999999988 8999988877
Q ss_pred HHHHHHHHHHHHHHHhhcchHHHHHHHHHHHHhhhchhhhhhhhhhhhhhccCCCC---cchhHHHHHHHHHHhh-HHHH
Q 011118 365 IWSQWFCLLICVASIWIHNSLVAAYMLMVGVATSRLGLWMFDLSVIQQMQDLVPES---DRCVVGGVQNSLQSTM-DLMA 440 (493)
Q Consensus 365 ~~~q~~~L~~~v~~~~~~~~~~s~~~l~~gi~~SR~GLw~fDl~~~~l~Qe~vp~~---~rG~v~gv~~sl~~~f-~l~~ 440 (493)
..... ....+..+.+ .. ..+..+..+..+|--.+..+...+.=+..|++ +|++..+...+..++- -++.
T Consensus 86 ~~~~~---~g~~~~~~~~-~~---~~~~~~~~l~g~g~g~~~~~~~~~~a~~~~~~~~~~r~~~~~~~~~~~niG~~ig~ 158 (475)
T TIGR00924 86 GIVLM---LGHFMLAMSI-YP---DLIFYGLGTIAVGSGLFKANPSSMVGKLYERGDMPRRDGGFTLFYMSINIGSFISP 158 (475)
T ss_pred HHHHH---HHHHHHHhcc-cH---hHHHHHHHHHHhccccccCCHHHHHHHhcCCCCcccccceehhHHHHHHHHHHHHH
Confidence 65221 1111112222 11 12223333334444445666666655555554 4888888777766666 5555
Q ss_pred HHHHHhccCCCCchHHHHHHHHHHHHHHHHH
Q 011118 441 YTMGIIISNPQDFWKLILISVIVVTLAAILY 471 (493)
Q Consensus 441 ~~~~ii~~~p~~F~~l~~~S~~~V~~~~~l~ 471 (493)
.+.+.+...-+ +.+...++......+.+.|
T Consensus 159 ~l~g~l~~~~g-~~~~f~~~~~~~~~~~l~~ 188 (475)
T TIGR00924 159 LLAGVIAENYG-YHVGFNLAAVGMVIGLLTF 188 (475)
T ss_pred HHHHHHHHhcC-hHHHHHHHHHHHHHHHHHH
Confidence 66666654322 3333333333333343333
No 146
>PRK08633 2-acyl-glycerophospho-ethanolamine acyltransferase; Validated
Probab=97.38 E-value=0.0069 Score=71.90 Aligned_cols=154 Identities=13% Similarity=0.032 Sum_probs=98.4
Q ss_pred ecccchHHHHHHHHHH-HHhhhhhhHHHHHHH-HcCCC--chHHHHHHHHHHHHHHHHHHHHHHHHhhhchhhhhHHHHH
Q 011118 291 LKQEVVLPGVSLALLF-FTVLSFGTLMTATLE-WEGIP--AYIIGIARGISATIGIAATILYPILQSRISTLRTGLWSIW 366 (493)
Q Consensus 291 ~~q~v~la~~alalLy-~tVL~f~~l~~~yl~-~~gls--~~~iG~~r~~~av~GllgT~~~~~l~~riGl~r~g~~~~~ 366 (493)
++++.|+..+...++. +.-......+..++. +.+.+ ...+|+..++-.++.++++..++++..|+|-.|...++..
T Consensus 6 ~~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~G~l~Dr~grk~~l~~~~~ 85 (1146)
T PRK08633 6 LKIIGFLPLLLTQFLNAFNDLGHKILIQNTLIKAYDGSEQVILTAIVNALFLLPFLLLSSPAGFLADKFSKNRVIRIVKL 85 (1146)
T ss_pred hhhhhhHHHHHHHHHhHHHHHHHHHHHHHHHHHHcCcccHHHHHHHHHHHHHHHHHHHhhhHhhhcccccHHHHHHHHHH
Confidence 3455555555444433 222233334444554 34443 4557888888888899999999999999998888877765
Q ss_pred HHHHHHHHHHHHHhhcchHHHHHHHHHHHHhhhchhhhhhhhhhhhhhccCCCCcchhHHHHHHHHHHhhHH-HHHHHHH
Q 011118 367 SQWFCLLICVASIWIHNSLVAAYMLMVGVATSRLGLWMFDLSVIQQMQDLVPESDRCVVGGVQNSLQSTMDL-MAYTMGI 445 (493)
Q Consensus 367 ~q~~~L~~~v~~~~~~~~~~s~~~l~~gi~~SR~GLw~fDl~~~~l~Qe~vp~~~rG~v~gv~~sl~~~f~l-~~~~~~i 445 (493)
...++.....+..+.+ + ...++.+.++..++.-.+..+...++.+.+|+++||+.+|...+..++..+ +..+.+.
T Consensus 86 ~~~~~~~~~~~~~~~~-~---~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~ig~~lg~~l~~~ 161 (1146)
T PRK08633 86 FEVGLTLLIVLAYYLG-W---FWLAFAVTFLLGAQSAIYSPAKYGIIPELVGKENLSRANGLLEAFTIVAILAGTALFSF 161 (1146)
T ss_pred HHHHHHHHHHHHHHHc-c---HHHHHHHHHHHHHHHHhhchHHHhhhHHhcCcccchhhhhHHHHHHHHHHHHHHHHHHH
Confidence 4433333222222222 1 333444444455556667888889999999999999999999998887744 4454555
Q ss_pred hcc
Q 011118 446 IIS 448 (493)
Q Consensus 446 i~~ 448 (493)
+..
T Consensus 162 l~~ 164 (1146)
T PRK08633 162 LFE 164 (1146)
T ss_pred HHH
Confidence 543
No 147
>TIGR00890 2A0111 Oxalate/Formate Antiporter.
Probab=97.35 E-value=0.012 Score=59.60 Aligned_cols=119 Identities=11% Similarity=-0.011 Sum_probs=76.4
Q ss_pred hhhhhHHHHHHHHcCCCchHHHHHHHHHHHHHHHHHHHHHHHHhhhchhhhhHHHHHHHHHHHHHHHHHHhhcchHHHHH
Q 011118 310 LSFGTLMTATLEWEGIPAYIIGIARGISATIGIAATILYPILQSRISTLRTGLWSIWSQWFCLLICVASIWIHNSLVAAY 389 (493)
Q Consensus 310 L~f~~l~~~yl~~~gls~~~iG~~r~~~av~GllgT~~~~~l~~riGl~r~g~~~~~~q~~~L~~~v~~~~~~~~~~s~~ 389 (493)
..++.+...+.++.|+++.++|...++..++..++....+++.+|+|..|....+... +...++...+.+ +.+.
T Consensus 20 ~~~~~~~~~~~~~~~~s~~~~g~~~s~~~~~~~~~~~~~G~l~d~~G~r~~~~~~~~~---~~~~~~~~~~~~-~~~~-- 93 (377)
T TIGR00890 20 YTWTLLAPPLGRYFGVGVTAVAIWFTLLLIGLAMSMPVGGLLADKFGPRAVAMLGGIL---YGLGFTFYAIAD-SLAA-- 93 (377)
T ss_pred hhhhhHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHhhhhHHHHHHcCccchhHHhHHH---HHHHHHHHHHHH-HHHH--
Confidence 3566666666667999999999999999999999999999999999988776655532 222222222222 2111
Q ss_pred HHHHHHHhhhchhhhhhhhhhhhhhccCCCCcchhHHHHHHHHHHhh
Q 011118 390 MLMVGVATSRLGLWMFDLSVIQQMQDLVPESDRCVVGGVQNSLQSTM 436 (493)
Q Consensus 390 ~l~~gi~~SR~GLw~fDl~~~~l~Qe~vp~~~rG~v~gv~~sl~~~f 436 (493)
+..+-.+..+|.-....+.....++..| ++||+..+...+..++-
T Consensus 94 -~~~~~~~~g~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~g 138 (377)
T TIGR00890 94 -LYLTYGLASAGVGIAYGIALNTAVKWFP-DKRGLASGIIIGGYGLG 138 (377)
T ss_pred -HHHHHHHHhHHHHHHHHhHHHHHHHHcC-cccHHHHHHHHHhcchh
Confidence 1122222223322233344556677766 47999999887776554
No 148
>PRK09705 cynX putative cyanate transporter; Provisional
Probab=97.34 E-value=0.014 Score=61.14 Aligned_cols=131 Identities=11% Similarity=0.075 Sum_probs=92.6
Q ss_pred hhhhHHHHHHHHcCCCchHHHHHHHHHHHHHHHHHHHHHHHHhhhchhhhhHHHHHHHHHHHHHHHHHHhhcchHHHHHH
Q 011118 311 SFGTLMTATLEWEGIPAYIIGIARGISATIGIAATILYPILQSRISTLRTGLWSIWSQWFCLLICVASIWIHNSLVAAYM 390 (493)
Q Consensus 311 ~f~~l~~~yl~~~gls~~~iG~~r~~~av~GllgT~~~~~l~~riGl~r~g~~~~~~q~~~L~~~v~~~~~~~~~~s~~~ 390 (493)
+++..++....+.|+|..++|..-++..++..++....+++.+|+|..|+..++..... ...+...+.++. . .
T Consensus 27 ~~~~~lp~i~~~~~~s~~~~g~~~s~~~~~~~l~~~~~g~l~dr~G~r~~l~~~~~l~~---~~~~~~~~a~~~-~---~ 99 (393)
T PRK09705 27 SVGPLLPQLRQASGMSFSVAALLTALPVVTMGGLALAGSWLHQHVSERRSVAISLLLIA---VGALMRELYPQS-A---L 99 (393)
T ss_pred ccchhHHHHHHHhCCCHHHHHHHHHHHHHHHHHHhhhhHHHHHHhCchHHHHHHHHHHH---HHHHHHHHCcch-H---H
Confidence 35556666666799999999999999999999999999999999999999888776322 222222333321 1 2
Q ss_pred HHHHHHhhhchhhhhhhhhhhhhhccCCCCcchhHHHHHHHHHHhh-HHHHHHHHHhccC
Q 011118 391 LMVGVATSRLGLWMFDLSVIQQMQDLVPESDRCVVGGVQNSLQSTM-DLMAYTMGIIISN 449 (493)
Q Consensus 391 l~~gi~~SR~GLw~fDl~~~~l~Qe~vp~~~rG~v~gv~~sl~~~f-~l~~~~~~ii~~~ 449 (493)
++.+-++..+|.=........++++..| ++||+++|...+..+.- .++..+...+.+.
T Consensus 100 ll~~r~l~Gig~~~~~~~~~~~~~~~~~-~~~~~~~g~~~~~~~~g~~~g~~~~~~l~~~ 158 (393)
T PRK09705 100 LLSSALLGGVGIGIIQAVMPSVIKRRFQ-QRTPLVMGLWSAALMGGGGLGAAITPWLVQH 158 (393)
T ss_pred HHHHHHHHHhHHHHHhhhhhHHHHHHcc-ccchhHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 2333444455555667777788888876 78999999988766555 6666666655544
No 149
>PLN00028 nitrate transmembrane transporter; Provisional
Probab=97.31 E-value=0.019 Score=61.93 Aligned_cols=125 Identities=11% Similarity=0.042 Sum_probs=78.7
Q ss_pred hhhhHHHHHHHHcCCCchHHHHHHHHHHHHHHHHHHHHHHHHhhhchhhhhHHHHHHHHHHHHHHHHHHhhcchH-HHHH
Q 011118 311 SFGTLMTATLEWEGIPAYIIGIARGISATIGIAATILYPILQSRISTLRTGLWSIWSQWFCLLICVASIWIHNSL-VAAY 389 (493)
Q Consensus 311 ~f~~l~~~yl~~~gls~~~iG~~r~~~av~GllgT~~~~~l~~riGl~r~g~~~~~~q~~~L~~~v~~~~~~~~~-~s~~ 389 (493)
+....+..+.++.|+++.++|...+...++...+.++.+++.+|+|..+...++.. .+....+...+.+... .-+.
T Consensus 54 ~~~~~~~~l~~~~gls~~~~g~~~~~~~~~~~~~~~~~G~l~dr~G~r~~~~~~~~---~~~~~~~~~~~~~s~~~l~~~ 130 (476)
T PLN00028 54 AAAPLLPIIRDNLNLTKSDIGNAGIASVSGSIFSRLAMGPVCDLYGPRYGSAFLLM---LTAPAVFCMSLVSSATGFIAV 130 (476)
T ss_pred HHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCChHHHHHHHH---HHHHHHHHHHHhcCHHHHHHH
Confidence 34444555555799999999999888888999999999999999998776665543 2222222222232111 1112
Q ss_pred HHHHHHHhhhchhhhhhhhhhhhhhccCCCCcchhHHHHHHHHHHhh-HHHHHHHH
Q 011118 390 MLMVGVATSRLGLWMFDLSVIQQMQDLVPESDRCVVGGVQNSLQSTM-DLMAYTMG 444 (493)
Q Consensus 390 ~l~~gi~~SR~GLw~fDl~~~~l~Qe~vp~~~rG~v~gv~~sl~~~f-~l~~~~~~ 444 (493)
-++.|+. ...+ .....++-+..|+++||+++|+.++..++. .++.++..
T Consensus 131 r~l~G~~-----~~~~-~~~~~~i~~~~~~~~rg~a~g~~~~~~~~g~~~~~~~~~ 180 (476)
T PLN00028 131 RFFIGFS-----LATF-VSCQYWMSTMFNGKIVGTANGIAAGWGNLGGGVTQLLMP 180 (476)
T ss_pred HHHHHHH-----HHhh-HHHHHHHHHhcChhheeHHHHHHHHHHHHHHHHHHHHHH
Confidence 2333333 2222 234456778899999999999988766554 44444443
No 150
>TIGR00901 2A0125 AmpG-related permease.
Probab=97.30 E-value=0.012 Score=60.04 Aligned_cols=131 Identities=10% Similarity=0.019 Sum_probs=78.1
Q ss_pred hhHHHHHHHHcCCCchHHHHHHHHHHHHHHHHHHHHHHHHhhh-----chhhhhHHHHHHHHHHHHHHHHHHhhcchHHH
Q 011118 313 GTLMTATLEWEGIPAYIIGIARGISATIGIAATILYPILQSRI-----STLRTGLWSIWSQWFCLLICVASIWIHNSLVA 387 (493)
Q Consensus 313 ~~l~~~yl~~~gls~~~iG~~r~~~av~GllgT~~~~~l~~ri-----Gl~r~g~~~~~~q~~~L~~~v~~~~~~~~~~s 387 (493)
+..+..++++.|+|..++|..-.++...+ + .++.+++..|+ |-.|.-+ +..+..+........+.++ ..+
T Consensus 8 ~~~~~~~~~~~g~s~~~~g~~~~~~~~~~-~-~~~~g~~~Dr~~~~~~Grr~~~l--~~~~~~~~~~~~~l~~~~~-~~~ 82 (356)
T TIGR00901 8 GNTLPYWLRSKNVSLKTIGFFSLVGLPYS-L-KFLWSPLVDTVYLPFFGRRRSWL--VLTQVLLLSLLLILSFLVP-STD 82 (356)
T ss_pred HhHHHHHHHHcCCCHHHHHHHHHHHHHHH-H-HHHHHHHHhcccCCCCCccHHHH--HHHHHHHHHHHHHHHcCCc-chh
Confidence 34677788899999999999976643333 3 77888888887 4334322 1222222222112222221 111
Q ss_pred HH-HHHHHHHhhhchhhhhhhhhhhhhhccCCCCcchhHHHHHHHHHHhhHH-HHHHHHHhccC
Q 011118 388 AY-MLMVGVATSRLGLWMFDLSVIQQMQDLVPESDRCVVGGVQNSLQSTMDL-MAYTMGIIISN 449 (493)
Q Consensus 388 ~~-~l~~gi~~SR~GLw~fDl~~~~l~Qe~vp~~~rG~v~gv~~sl~~~f~l-~~~~~~ii~~~ 449 (493)
.. +...+... .++--..|+....++-|.+|+++||+++|.+.+-.++..+ +..+.+.+.+.
T Consensus 83 l~~l~~~~~~~-~~~~~~~~~~~~a~~~~~~~~~~r~~~~~~~~~~~~~G~~~~~~l~~~l~~~ 145 (356)
T TIGR00901 83 LPLLAGLAFLI-AFFSATQDIALDAWRLEILSDEELGYGSTIYIVGYRAGMLLSGSLALVLASP 145 (356)
T ss_pred HHHHHHHHHHH-HHHHHHHHHHHHHHHHHhCCHhhhchHHHHHHHHHHHHHHHHHHHHHHHhhh
Confidence 11 11222222 2444567999999999999999999999998876666644 44444444443
No 151
>PRK11652 emrD multidrug resistance protein D; Provisional
Probab=97.30 E-value=0.017 Score=59.95 Aligned_cols=148 Identities=14% Similarity=0.032 Sum_probs=88.7
Q ss_pred ccchHHHHHHHHHHHHh----hhhhhHHHHHHHHcCCCchHHHHHHHHHHHHHHHHHHHHHHHHhhhchhhhhHHHHHHH
Q 011118 293 QEVVLPGVSLALLFFTV----LSFGTLMTATLEWEGIPAYIIGIARGISATIGIAATILYPILQSRISTLRTGLWSIWSQ 368 (493)
Q Consensus 293 q~v~la~~alalLy~tV----L~f~~l~~~yl~~~gls~~~iG~~r~~~av~GllgT~~~~~l~~riGl~r~g~~~~~~q 368 (493)
|+.++......+.++.. -.+...+..+.++.|+++.++|...+...++..++....+++.+|+|..|...++....
T Consensus 4 ~~~~~~l~~~~~~~~~~~~~~~~~~p~~~~i~~~~~~s~~~~~~~~~~~~~~~~~~~~~~G~l~Dr~grr~~~~~~~~~~ 83 (394)
T PRK11652 4 QRNVNLLFMLVLLVAVGQMAQTIYVPAIADMARDLNVREGAVQAVMAAYLLTYGLSQLFYGPLSDRVGRRPVILVGMSIF 83 (394)
T ss_pred hhhHHHHHHHHHHHHHHHHHHHHHhccHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHhhhhHHHhcCChHHHHHHHHHH
Confidence 44555555555444321 12333456667789999999999999999999999999999999999877766554321
Q ss_pred HHHHHHHHHHHhhcchHHHHHHHHHHHHhhhchhhhhhhhhhhhhhccCCCCcchhHHHHHHHHHHhhHH-HHHHHHHhc
Q 011118 369 WFCLLICVASIWIHNSLVAAYMLMVGVATSRLGLWMFDLSVIQQMQDLVPESDRCVVGGVQNSLQSTMDL-MAYTMGIII 447 (493)
Q Consensus 369 ~~~L~~~v~~~~~~~~~~s~~~l~~gi~~SR~GLw~fDl~~~~l~Qe~vp~~~rG~v~gv~~sl~~~f~l-~~~~~~ii~ 447 (493)
.+ ........+ +.+ .++.+-.+..+|.-........+..+..|++++++.++....-.....+ +..+.+.+.
T Consensus 84 ~~---~~~~~~~~~-~~~---~l~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~i~~~l~ 156 (394)
T PRK11652 84 IL---GTLVALFAH-SLT---VLIAASAIQGLGTGVGGVMARTLPRDLYEGTQLRHANSLLNMGILVSPLLAPLIGGLLT 156 (394)
T ss_pred HH---HHHHHHHHc-cHH---HHHHHHHHHHhhhhHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 11 111112222 111 1112222222222233455556667778889999988887666665543 334444443
No 152
>PRK15402 multidrug efflux system translocase MdfA; Provisional
Probab=97.29 E-value=0.018 Score=60.22 Aligned_cols=130 Identities=16% Similarity=0.081 Sum_probs=83.6
Q ss_pred hhhHHHHHHHHcCCCchHHHHHHHHHHHHHHHHHHHHHHHHhhhchhhhhHHHHHHHHHHHHHHHHHHhhcchHHHHHHH
Q 011118 312 FGTLMTATLEWEGIPAYIIGIARGISATIGIAATILYPILQSRISTLRTGLWSIWSQWFCLLICVASIWIHNSLVAAYML 391 (493)
Q Consensus 312 f~~l~~~yl~~~gls~~~iG~~r~~~av~GllgT~~~~~l~~riGl~r~g~~~~~~q~~~L~~~v~~~~~~~~~~s~~~l 391 (493)
+...+..+.++.|+++.++|...+...++...+.+..+++.+|+|..|...++... +...+....+.+ +.+. +
T Consensus 32 ~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~G~l~dr~g~r~~l~~~~~~---~~~~~~~~~~~~-~~~~---l 104 (406)
T PRK15402 32 IQPGMLAVVEDFNAGAEWVPTSMTAYLAGGMFLQWLLGPLSDRIGRRPVMLAGVAF---FILTCLAILLAQ-SIEQ---F 104 (406)
T ss_pred HhcchHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCChHHHHHHHHH---HHHHHHHHHHHc-cHHH---H
Confidence 33445556678999999999999999999999999999999999988876665542 111222222222 2221 2
Q ss_pred HHHHHhhhchhhhhhhhhhhhhhccCCCCcchhHHHHHHHHHHhh-HHHHHHHHHhcc
Q 011118 392 MVGVATSRLGLWMFDLSVIQQMQDLVPESDRCVVGGVQNSLQSTM-DLMAYTMGIIIS 448 (493)
Q Consensus 392 ~~gi~~SR~GLw~fDl~~~~l~Qe~vp~~~rG~v~gv~~sl~~~f-~l~~~~~~ii~~ 448 (493)
..+-.+..++.-.+.......++|..|+++|++.++......... -++..+.+.+..
T Consensus 105 ~~~~~l~G~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~g~~i~~~l~~ 162 (406)
T PRK15402 105 TLLRFLQGIGLCFIGAVGYAAIQESFEEADAIKITALMANVALLAPLLGPLVGAALIH 162 (406)
T ss_pred HHHHHHHHhHhhhHHHHHHHHHHHHhChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 222222223322335566788889999999999988877766554 333344444433
No 153
>TIGR00880 2_A_01_02 Multidrug resistance protein.
Probab=97.29 E-value=0.0025 Score=54.64 Aligned_cols=107 Identities=14% Similarity=0.056 Sum_probs=68.8
Q ss_pred HHHHHHHHHHHHHHHHHhhhchhhhhHHHHHHHHHHHHHHHHHHhhcchHHHHHHHHHHHHhhhchhhhhhhhhhhhhhc
Q 011118 336 ISATIGIAATILYPILQSRISTLRTGLWSIWSQWFCLLICVASIWIHNSLVAAYMLMVGVATSRLGLWMFDLSVIQQMQD 415 (493)
Q Consensus 336 ~~av~GllgT~~~~~l~~riGl~r~g~~~~~~q~~~L~~~v~~~~~~~~~~s~~~l~~gi~~SR~GLw~fDl~~~~l~Qe 415 (493)
...++++++....+++.+|+|..|.-..+.... ........+.+ +.+ .+.....+..++.-..+.....+.+|
T Consensus 6 ~~~~~~~~~~~~~g~~~d~~g~~~~~~~~~~~~---~~~~~~~~~~~-~~~---~~~~~~~~~g~~~~~~~~~~~~~~~~ 78 (141)
T TIGR00880 6 GYALGQLIYSPLSGLLTDRFGRKPVLLVGLFIF---VLSTAMFALSS-NIT---VLIIARFLQGFGAAFALVAGAALIAD 78 (141)
T ss_pred eehhHHHHHHhhHHHHHhhcchhHHHHHHHHHH---HHHHHHHHHhc-cHH---HHHHHHHHHHHHHHHHHHhHHHHHHH
Confidence 345677888999999999999777655444321 11111111222 222 12222333334444557788889999
Q ss_pred cCCCCcchhHHHHHHHHHHhh-HHHHHHHHHhccC
Q 011118 416 LVPESDRCVVGGVQNSLQSTM-DLMAYTMGIIISN 449 (493)
Q Consensus 416 ~vp~~~rG~v~gv~~sl~~~f-~l~~~~~~ii~~~ 449 (493)
..|+++|+++++..++.++.. -++..+.+.+...
T Consensus 79 ~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~ 113 (141)
T TIGR00880 79 IYPPEERGVALGLMSAGIALGPLLGPPLGGVLAQF 113 (141)
T ss_pred HCChhhhhHHHHHHHHhHHHHHHHhHHhHHHHhcc
Confidence 999999999999999988888 6666666666533
No 154
>PRK11043 putative transporter; Provisional
Probab=97.26 E-value=0.022 Score=59.31 Aligned_cols=126 Identities=13% Similarity=0.047 Sum_probs=81.4
Q ss_pred HHHHHHHcCCCchHHHHHHHHHHHHHHHHHHHHHHHHhhhchhhhhHHHHHHHHHHHHHHHHHHhhcchHHHHHHHHHHH
Q 011118 316 MTATLEWEGIPAYIIGIARGISATIGIAATILYPILQSRISTLRTGLWSIWSQWFCLLICVASIWIHNSLVAAYMLMVGV 395 (493)
Q Consensus 316 ~~~yl~~~gls~~~iG~~r~~~av~GllgT~~~~~l~~riGl~r~g~~~~~~q~~~L~~~v~~~~~~~~~~s~~~l~~gi 395 (493)
+..+.++.|.++.++|...++..++..++.+..+++.+|+|..|...++.. .+...+....+.+ +.+ .+..+.
T Consensus 29 ~~~i~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~---~~~~~~~~~~~~~-~~~---~l~~~~ 101 (401)
T PRK11043 29 FKAIQADLQTSASAVSASLSLFLAGFALGQLLWGPLSDRYGRKPVLLAGLS---LFALGSLGMLWVE-SAA---QLLVLR 101 (401)
T ss_pred HHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHhhhhHHhhcCCcHHHHHHHH---HHHHHHHHHHHhc-CHH---HHHHHH
Confidence 333455789999999999999999999999999999999998877665543 1222222222232 211 122222
Q ss_pred HhhhchhhhhhhhhhhhhhccCCCCcchhHHHHHHHHHHhh-HHHHHHHHHhcc
Q 011118 396 ATSRLGLWMFDLSVIQQMQDLVPESDRCVVGGVQNSLQSTM-DLMAYTMGIIIS 448 (493)
Q Consensus 396 ~~SR~GLw~fDl~~~~l~Qe~vp~~~rG~v~gv~~sl~~~f-~l~~~~~~ii~~ 448 (493)
.+..+|.-........+..+..|++++++..+...+...+. -++..+.+.+..
T Consensus 102 ~l~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~i~~~l~~ 155 (401)
T PRK11043 102 FVQAVGVCSAAVIWQALVIDRYPAQKANRVFATIMPLVALSPALAPLLGAWLLN 155 (401)
T ss_pred HHHHhhhHHHHHHHHHHHHHhcCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 23333333334556677888899999999888777666555 444555555543
No 155
>PRK09874 drug efflux system protein MdtG; Provisional
Probab=97.25 E-value=0.017 Score=59.91 Aligned_cols=127 Identities=14% Similarity=0.077 Sum_probs=80.7
Q ss_pred hhhHHHHHHHHcCCCchH-----HHHHHHHHHHHHHHHHHHHHHHHhhhchhhhhHHHHHHHHHHHHHHHHHHhhcchHH
Q 011118 312 FGTLMTATLEWEGIPAYI-----IGIARGISATIGIAATILYPILQSRISTLRTGLWSIWSQWFCLLICVASIWIHNSLV 386 (493)
Q Consensus 312 f~~l~~~yl~~~gls~~~-----iG~~r~~~av~GllgT~~~~~l~~riGl~r~g~~~~~~q~~~L~~~v~~~~~~~~~~ 386 (493)
....+..|.++.|+++.. .|...++..+++.++..+.+++.+|+|..|...++..... .......+.+ +.+
T Consensus 33 ~~~~l~~~~~~~g~~~~~~~~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~---~~~~~~~~~~-~~~ 108 (408)
T PRK09874 33 VMPFLPLYVEQLGVTGHSALNMWSGLVFSITFLFSAIASPFWGGLADRKGRKIMLLRSALGMG---IVMVLMGLAQ-NIW 108 (408)
T ss_pred hhhhHHHHHHHhCCccchhHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhCcHHHHHHHHHHHH---HHHHHHHHHh-hHH
Confidence 445678888888988654 5999999999999999999999999998777665443211 1111111222 221
Q ss_pred H--HHHHHHHHHhhhchhhhhhhhhhhhhhccCCCCcchhHHHHHHHHHHhh-HHHHHHHHHhcc
Q 011118 387 A--AYMLMVGVATSRLGLWMFDLSVIQQMQDLVPESDRCVVGGVQNSLQSTM-DLMAYTMGIIIS 448 (493)
Q Consensus 387 s--~~~l~~gi~~SR~GLw~fDl~~~~l~Qe~vp~~~rG~v~gv~~sl~~~f-~l~~~~~~ii~~ 448 (493)
. +..++.|+. .+ +......++.+..|+++||+.+|......+.. -++..+.+.+..
T Consensus 109 ~~~~~~~~~g~~---~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~l~~ 167 (408)
T PRK09874 109 QFLILRALLGLL---GG---FVPNANALIATQVPRNKSGWALGTLSTGGVSGALLGPLAGGLLAD 167 (408)
T ss_pred HHHHHHHHHHHh---hh---hHHhHHHHHHHhcCHhhhhHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 1 122223332 12 23445677888899999999999887766555 344555555543
No 156
>PRK15462 dipeptide/tripeptide permease D; Provisional
Probab=97.23 E-value=0.025 Score=61.74 Aligned_cols=136 Identities=10% Similarity=-0.015 Sum_probs=90.0
Q ss_pred HHhhhhhhHHHHHHHH-cCCCchHHHHHHHHHHHHHHHHHHHHHHHHhhh-chhhhhHHHHHHHHHHHHHHHHHHhhcch
Q 011118 307 FTVLSFGTLMTATLEW-EGIPAYIIGIARGISATIGIAATILYPILQSRI-STLRTGLWSIWSQWFCLLICVASIWIHNS 384 (493)
Q Consensus 307 ~tVL~f~~l~~~yl~~-~gls~~~iG~~r~~~av~GllgT~~~~~l~~ri-Gl~r~g~~~~~~q~~~L~~~v~~~~~~~~ 384 (493)
+..-++...++.|+.+ .|+++...+...+...+...++.++.+++..|+ |-.|+-.++.....+... + ...+..
T Consensus 23 fs~Yg~~~~L~~yL~~~lgls~~~a~~i~~~~~~~~~l~~ligG~LaDRilGrrr~iliG~il~~lg~l---l-l~~~~~ 98 (493)
T PRK15462 23 FSFYGMRALLILYLTNQLKYDDNHAYELFSAYCSLVYVTPILGGFLADKVLGNRMAVMLGALLMAIGHV---V-LGASEI 98 (493)
T ss_pred HHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHccCcHHHHHHHHHHHHHHHH---H-HHHhhc
Confidence 4455677788999985 799999999999999999999999999999998 998888777764332211 1 111111
Q ss_pred HHHHHHHHHHHHhhhchhhhhhhhhhhhhhccCCCC--cchhHHHHHHHHHHhh-HHHHHHHHHhcc
Q 011118 385 LVAAYMLMVGVATSRLGLWMFDLSVIQQMQDLVPES--DRCVVGGVQNSLQSTM-DLMAYTMGIIIS 448 (493)
Q Consensus 385 ~~s~~~l~~gi~~SR~GLw~fDl~~~~l~Qe~vp~~--~rG~v~gv~~sl~~~f-~l~~~~~~ii~~ 448 (493)
.... +..+..+.-+|...+-.+...++.|..|++ +|++..+...+..++. -+..++.+.+..
T Consensus 99 ~~~~--~~l~l~li~iG~G~~~~~~~alv~elfp~~~~~R~sgf~i~Y~~~nlG~~iap~l~g~L~~ 163 (493)
T PRK15462 99 HPSF--LYLSLAIIVCGYGLFKSNVSCLLGELYEPTDPRRDGGFSLMYAAGNVGSIIAPIACGYAQE 163 (493)
T ss_pred chhH--HHHHHHHHHHhcccccccHHHHHHHHCCCCCccccceehHHHHHHHHHHHHHHHHHHHHHh
Confidence 0111 111211222343444555667888888765 7988999988888876 444455555543
No 157
>PRK11195 lysophospholipid transporter LplT; Provisional
Probab=97.23 E-value=0.011 Score=61.92 Aligned_cols=123 Identities=10% Similarity=0.023 Sum_probs=91.7
Q ss_pred HHHHHHHcCCCchHHHHHHHHHHHHHHHHHHHHHHHHhhhchhhhhHHHHHHHHHHHHHHHHHHhhcchHHHHHHHHHHH
Q 011118 316 MTATLEWEGIPAYIIGIARGISATIGIAATILYPILQSRISTLRTGLWSIWSQWFCLLICVASIWIHNSLVAAYMLMVGV 395 (493)
Q Consensus 316 ~~~yl~~~gls~~~iG~~r~~~av~GllgT~~~~~l~~riGl~r~g~~~~~~q~~~L~~~v~~~~~~~~~~s~~~l~~gi 395 (493)
+..+.++.|.++..+|+..++..+...+...+++++..|+|..|...++...+.+... ...+...+ ..+-
T Consensus 26 ~~~~~~~~~~s~~~~~~~~~~~~l~~~l~~~~~G~laDr~grr~vl~~~~~~~~~~~~---~~~~~~~~-------~~~r 95 (393)
T PRK11195 26 AIALLKELHYPDWSQPLLQMFFVLAYIVLAPFVGAFADSFPKGRVMFIANGIKLLGCL---LMLFGIHP-------LLAY 95 (393)
T ss_pred HHHHHHHcCCcHHHHHHHHHHHHHHHHHHHhhhhHhhhccCCchhhHHHHHHHHHHHH---HHHHHHHH-------HHHH
Confidence 3345668899999999999999999999999999999999999998888764433222 21222111 1122
Q ss_pred HhhhchhhhhhhhhhhhhhccCCCCcchhHHHHHHHHHHhh-HHHHHHHHHhcc
Q 011118 396 ATSRLGLWMFDLSVIQQMQDLVPESDRCVVGGVQNSLQSTM-DLMAYTMGIIIS 448 (493)
Q Consensus 396 ~~SR~GLw~fDl~~~~l~Qe~vp~~~rG~v~gv~~sl~~~f-~l~~~~~~ii~~ 448 (493)
++..+|.-.+..+...++-|.+|+++|++.+|......++. -++..+.+++..
T Consensus 96 ~l~G~~~a~~~pa~~a~i~~~~~~~~~~~a~~~~~~~~~~~~~~Gp~lgG~l~~ 149 (393)
T PRK11195 96 GLVGIGAAAYSPAKYGILTELLPGEKLVKANGWMEGSTIAAILLGTVLGGALAD 149 (393)
T ss_pred HHHHHHHHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 33456666789999999999999999999999998888876 455566666654
No 158
>PRK11273 glpT sn-glycerol-3-phosphate transporter; Provisional
Probab=97.22 E-value=0.011 Score=63.12 Aligned_cols=118 Identities=9% Similarity=-0.121 Sum_probs=75.3
Q ss_pred HHHHHHHcCCCchHHHHHHHHHHHHHHHHHHHHHHHHhhhchhhhhHHHHHHHHHHHHHHHHHHhhcchHHHHHHHHHHH
Q 011118 316 MTATLEWEGIPAYIIGIARGISATIGIAATILYPILQSRISTLRTGLWSIWSQWFCLLICVASIWIHNSLVAAYMLMVGV 395 (493)
Q Consensus 316 ~~~yl~~~gls~~~iG~~r~~~av~GllgT~~~~~l~~riGl~r~g~~~~~~q~~~L~~~v~~~~~~~~~~s~~~l~~gi 395 (493)
...|+.+.|+++..+|+..+...++-.++....+++.+|+|..|...++..... +.+....+.+....+...+..+.
T Consensus 51 ~~p~l~~~g~s~~~~g~~~~~~~i~~~~~~~~~G~l~Dr~g~k~~l~~~~~~~~---i~~~~~~~~~~~~~~~~~~~~~~ 127 (452)
T PRK11273 51 AMPYLVEQGFSRGDLGFALSGISIAYGFSKFIMGSVSDRSNPRVFLPAGLILAA---AVMLFMGFVPWATSSIAVMFVLL 127 (452)
T ss_pred hhHHHHHcCCCHHHHHHHHHHHHHHHHHHHhhhhhhhhccCCchhHHHHHHHHH---HHHHHHHhhhcccccHHHHHHHH
Confidence 344666559999999999999999999999999999999999887666554211 11111111110000111222222
Q ss_pred HhhhchhhhhhhhhhhhhhccCCCCcchhHHHHHHHHHHhh
Q 011118 396 ATSRLGLWMFDLSVIQQMQDLVPESDRCVVGGVQNSLQSTM 436 (493)
Q Consensus 396 ~~SR~GLw~fDl~~~~l~Qe~vp~~~rG~v~gv~~sl~~~f 436 (493)
.+.+++.-.+.......+.+..|+++||+..|+.+...+..
T Consensus 128 ~l~gi~~g~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g 168 (452)
T PRK11273 128 FLCGWFQGMGWPPCGRTMVHWWSQKERGGIVSVWNCAHNVG 168 (452)
T ss_pred HHHHHHHhccchHHHHHHHHhCChHHHHHHHHHHHHHHHhh
Confidence 23333332334555667788899999999999876666654
No 159
>TIGR00879 SP MFS transporter, sugar porter (SP) family. This model represent the sugar porter subfamily of the major facilitator superfamily (pfam00083)
Probab=97.18 E-value=0.014 Score=61.01 Aligned_cols=116 Identities=16% Similarity=0.149 Sum_probs=81.6
Q ss_pred CCchHHHHHHHHHHHHHHHHHHHHHHHHhhhchhhhhHHHHHHHHHHHHHHHHHHhhcchHHHHHHHHHHHHhhhchhhh
Q 011118 325 IPAYIIGIARGISATIGIAATILYPILQSRISTLRTGLWSIWSQWFCLLICVASIWIHNSLVAAYMLMVGVATSRLGLWM 404 (493)
Q Consensus 325 ls~~~iG~~r~~~av~GllgT~~~~~l~~riGl~r~g~~~~~~q~~~L~~~v~~~~~~~~~~s~~~l~~gi~~SR~GLw~ 404 (493)
.+..+.|+..++..++..++....+++.+|+|..|.-..+... +...++...+.+. ..+...++.+-.+..+|.-.
T Consensus 68 ~~~~~~~~~~~~~~~~~~i~~~~~g~l~d~~grr~~~~~~~~~---~~~~~~~~~~~~~-~~~~~~~~~~r~l~G~~~~~ 143 (481)
T TIGR00879 68 YSSSLWGLVVSIFLVGGFIGALFAGWLSDRFGRKKSLLIIALL---FVIGAILMGLAAF-ALSVEMLIVGRVLLGIGVGI 143 (481)
T ss_pred CChhHHHHHHHHHHHHHHHHHHHhhHhhhhhhhHHHHHHHHHH---HHHHHHHHHHhcc-ccchHHHHHHHHHHHhhhhH
Confidence 4489999999999999999999999999999987776665542 2222222222221 11122344445555556556
Q ss_pred hhhhhhhhhhccCCCCcchhHHHHHHHHHHhhHHHHHHHH
Q 011118 405 FDLSVIQQMQDLVPESDRCVVGGVQNSLQSTMDLMAYTMG 444 (493)
Q Consensus 405 fDl~~~~l~Qe~vp~~~rG~v~gv~~sl~~~f~l~~~~~~ 444 (493)
+......++.|..|+++||+..+...+..++-..+....+
T Consensus 144 ~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~~~~~~ 183 (481)
T TIGR00879 144 ASALVPMYLSEIAPKALRGALTSLYQLAITFGILVAYGFG 183 (481)
T ss_pred HHhHHHHHHHccCChhhhhhhhhHHHHHHHHHHHHHHHHH
Confidence 6778888999999999999999998777766655555555
No 160
>PRK10133 L-fucose transporter; Provisional
Probab=97.18 E-value=0.039 Score=58.95 Aligned_cols=123 Identities=13% Similarity=0.035 Sum_probs=85.7
Q ss_pred hhhHHHHHHHHcCCCchHHHHHHHHHHHHHHHHHHHHHHHHhhhchhhhhHHHHHHHHHHHHHHHHHHhhcchHHHHHHH
Q 011118 312 FGTLMTATLEWEGIPAYIIGIARGISATIGIAATILYPILQSRISTLRTGLWSIWSQWFCLLICVASIWIHNSLVAAYML 391 (493)
Q Consensus 312 f~~l~~~yl~~~gls~~~iG~~r~~~av~GllgT~~~~~l~~riGl~r~g~~~~~~q~~~L~~~v~~~~~~~~~~s~~~l 391 (493)
.+.+++.+-.+.|+++.+.|...+.-.++-.++....+++.+|+|..|+-.++...-.+....+......+ +...+
T Consensus 45 ~~~~~p~i~~~~~~s~~~~gl~~~~~~~g~~i~~~~~g~l~dr~G~r~~l~~g~~~~~~~~~l~~~~~~a~----~~~~l 120 (438)
T PRK10133 45 NDILLPQFQQAFTLTNFQAGLIQSAFYFGYFIIPIPAGILMKKLSYKAGIITGLFLYALGAALFWPAAEIM----NYTLF 120 (438)
T ss_pred HHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHHHhcC----CHHHH
Confidence 44566666447999999999999999999999999999999999999988877763222222111111121 23344
Q ss_pred HHHHHhhhchhhhhhhhhhhhhhccCCCCcchhHHHHHHHHHHhhHH
Q 011118 392 MVGVATSRLGLWMFDLSVIQQMQDLVPESDRCVVGGVQNSLQSTMDL 438 (493)
Q Consensus 392 ~~gi~~SR~GLw~fDl~~~~l~Qe~vp~~~rG~v~gv~~sl~~~f~l 438 (493)
+.+.++..+|.=..|.+.+.++.+..|+++|++..+...+.+.+-..
T Consensus 121 l~~r~l~G~g~g~~~~~~~~~v~~~~~~~~~~~~~s~~~~~~~~G~~ 167 (438)
T PRK10133 121 LVGLFIIAAGLGCLETAANPFVTVLGPESSGHFRLNLAQTFNSFGAI 167 (438)
T ss_pred HHHHHHHHHHHHHHHhhHHHHHHHhCChhhHHHHHHHHHHHHHHHHH
Confidence 55566666777788999999998876777776666665555555533
No 161
>PF06609 TRI12: Fungal trichothecene efflux pump (TRI12); InterPro: IPR010573 This family consists of several fungal specific trichothecene efflux pump proteins. Many of the genes involved in trichothecene toxin biosynthesis in Fusarium sporotrichioides are present within a gene cluster. It has been suggested that TRI12 may play a role in F. sporotrichioides self-protection against trichothecenes [].
Probab=97.14 E-value=0.43 Score=53.26 Aligned_cols=136 Identities=14% Similarity=0.075 Sum_probs=75.9
Q ss_pred cchHHHHHHHHHH----HHhhhhhhHHHHHHHHcCC-CchHHHHHHHHHHHHHHHHHHHHHHHHhhhchhhhhH-HHHHH
Q 011118 294 EVVLPGVSLALLF----FTVLSFGTLMTATLEWEGI-PAYIIGIARGISATIGIAATILYPILQSRISTLRTGL-WSIWS 367 (493)
Q Consensus 294 ~v~la~~alalLy----~tVL~f~~l~~~yl~~~gl-s~~~iG~~r~~~av~GllgT~~~~~l~~riGl~r~g~-~~~~~ 367 (493)
+.|-..+..++++ +.+..+-.++..+..+... +....|..-.....+...|.++.+.+.++++..|--+ .+..+
T Consensus 310 r~~~~~lvi~fi~G~~~~s~~~l~p~~~~~vf~~d~~~~~~~~~~s~~~~fg~~~g~~i~g~l~~~ir~~Kw~li~~~~~ 389 (599)
T PF06609_consen 310 RGFAALLVISFISGMNFFSVNILWPQQVVNVFGSDPISITEIGWISSPVGFGSCAGAVILGLLFSKIRHIKWQLIFGSVL 389 (599)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCCcccceeehhhhhHHHHHHHHHHHHHHHHHHccchhHHHHHHHHH
Confidence 5665555554444 2333455556655554432 2223444444455566677788999999998777553 33333
Q ss_pred HHHHHHHHHHHHhhcch--HHHHHHHHHHHHhhhchhhhhhhhhhhhhhccCCCCcchhHHHHHHHHHHhh
Q 011118 368 QWFCLLICVASIWIHNS--LVAAYMLMVGVATSRLGLWMFDLSVIQQMQDLVPESDRCVVGGVQNSLQSTM 436 (493)
Q Consensus 368 q~~~L~~~v~~~~~~~~--~~s~~~l~~gi~~SR~GLw~fDl~~~~l~Qe~vp~~~rG~v~gv~~sl~~~f 436 (493)
+..+.. ......+.. ..-.+ .+++.+|.-.......-+.|-.+|+++.|.++|+-.+...+.
T Consensus 390 ~ta~~G--ama~~~~~n~~~~i~~-----~~l~g~giG~~~~~~~~~~ql~~p~~~ig~a~gL~~s~R~~G 453 (599)
T PF06609_consen 390 MTAFCG--AMAAVRPDNKNAAIAF-----LVLAGFGIGGILVPAIVIAQLIVPDEDIGTATGLTGSIRSIG 453 (599)
T ss_pred HHHHHH--HHHHccCCCcchHHHH-----HHHHHHhHHHHHHHHHHeeEeeeCchHHHHHHHHHHHHHHHh
Confidence 332221 111112211 11122 233344544556666778899999999999998777666554
No 162
>TIGR00896 CynX cyanate transporter. This family of proteins is involved in active transport of cyanate. The cyanate transporter in E.Coli is used to transport cyanate into the cell so it can be metabolized into ammonia and bicarbonate. This process is used to overcome the toxicity of environmental cyanate.
Probab=97.12 E-value=0.019 Score=58.80 Aligned_cols=128 Identities=13% Similarity=0.092 Sum_probs=84.6
Q ss_pred hhhHHHHHHHHcCCCchHHHHHHHHHHHHHHHHHHHHHHHHhhhchhhhhHHHHHHHHHHHHHHHHHHhhcchHHHHHHH
Q 011118 312 FGTLMTATLEWEGIPAYIIGIARGISATIGIAATILYPILQSRISTLRTGLWSIWSQWFCLLICVASIWIHNSLVAAYML 391 (493)
Q Consensus 312 f~~l~~~yl~~~gls~~~iG~~r~~~av~GllgT~~~~~l~~riGl~r~g~~~~~~q~~~L~~~v~~~~~~~~~~s~~~l 391 (493)
++..+..+.++.|+++.+.|...++..++..++....+++.+|+|..|...++.... ....+.. ..+. . ..+
T Consensus 19 ~~~~lp~l~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~---~~~~~~~-~~~~-~---~~l 90 (355)
T TIGR00896 19 VGPLLPQIRSALGMSFSVAGLLTALPVLCFAVLAPLAPWLARRFGEERSVAAGLLLI---AAGILIR-SAPG-T---ALL 90 (355)
T ss_pred CcccHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHhHHHHHHHhCchHHHHHHHHHH---HHHHHHH-Hhcc-H---HHH
Confidence 556777777789999999999999999999999999999999999988877766522 1111121 2221 1 122
Q ss_pred HHHHHhhhchhhhhhhhhhhhhhccCCCCcchhHHHHHHHHHHhhH-HHHHHHHHhcc
Q 011118 392 MVGVATSRLGLWMFDLSVIQQMQDLVPESDRCVVGGVQNSLQSTMD-LMAYTMGIIIS 448 (493)
Q Consensus 392 ~~gi~~SR~GLw~fDl~~~~l~Qe~vp~~~rG~v~gv~~sl~~~f~-l~~~~~~ii~~ 448 (493)
+.+-.+..+|.-..+.....+..+..| ++||+.+|...+.+++.. ++..+.+.+..
T Consensus 91 ~~~~~~~g~g~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~g~~i~~~~~~~l~~ 147 (355)
T TIGR00896 91 FAGTALIGVGIAIINVLLPSLIKRDFP-QRVGLMTGLYSMALMGGAALAAAATVPLAQ 147 (355)
T ss_pred HHHHHHHHHHHHHHhccchHHHHHhCc-chhhHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 222223333333345555566666666 589999999888777663 44444444443
No 163
>KOG3764 consensus Vesicular amine transporter [Intracellular trafficking, secretion, and vesicular transport]
Probab=97.09 E-value=0.017 Score=60.82 Aligned_cols=293 Identities=16% Similarity=0.151 Sum_probs=149.4
Q ss_pred CchHHHHHHHHHHHHHHHhhhccceeeecccchhHHHHHHHHHHHHHHHHHHHHHHHHHhhcccccchhHHHHHHHHHHH
Q 011118 50 DSLLFAAIYGAVESASIALFGPIVGHWVDKLTYVKVLQIWLVTQNLSFIVAGVSVITLLFFSSLKSTNFIAFVLLVILTN 129 (493)
Q Consensus 50 ~sll~~sv~gl~~~l~~llfg~~vG~~vDr~~R~~v~~~~~~~q~~~v~~s~~~~~~~l~~~~~~~~~~~~~~~l~~~~~ 129 (493)
++-..+|+.-.+-.+..++.+|++|.++||..++--|.+...+-..+ .++ +.+. .+ |..+++.=.
T Consensus 103 ~e~~~iG~LFaskA~~qllvnp~~G~l~~~iGy~ipm~~Gl~vmf~s----Til-Fafg-------~s---y~~l~vAR~ 167 (464)
T KOG3764|consen 103 RENTQIGLLFASKALVQLLVNPFFGNLIDRIGYKIPMVAGLFVMFLS----TIL-FAFG-------NS---YPMLFVARS 167 (464)
T ss_pred ccccchhHHHHHHHHHHHHhcccchhhHHHhccccHHHHHHHHHHHH----HHH-HHHc-------ch---hHHHHHHHH
Confidence 45567788888889999999999999999999988887776433332 332 2111 11 122222222
Q ss_pred HHHHHHHhhhhhhhhhhccceEEEecCCCChhhhhhhhhHHHhHHHHHHhhhhHHHHHHHHhhhhHHHHHHHHHHHHHHH
Q 011118 130 ISGAVGVISTLAGTILIEREWVVVISEGHPPEALTKMNSIIRRIDLTCKLLAPAITGFIISFVSLQASAMTLAIWTTVTV 209 (493)
Q Consensus 130 ~~g~~~~l~~~a~~iaieRDWvv~i~~~~~~~~L~~~Na~mrriDl~~~l~gP~~~G~l~~~~s~~~a~~~i~~~n~~S~ 209 (493)
+-|.-+..++++ ..++--|=. .+|+ ++=..+- ....--....++||-++|.+++++|...-..+.+..-++.-
T Consensus 168 LQgvgsA~~~ts-glamlAd~f----~~d~-er~~vmG-ialgfislG~lvgPpfGGilYe~~Gk~aPFlVL~~v~Lld~ 240 (464)
T KOG3764|consen 168 LQGVGSAFADTS-GLAMLADVF----PEDN-ERGSVMG-IALGFISLGVLVGPPFGGILYEFAGKSAPFLVLAIVLLLDG 240 (464)
T ss_pred HhhhhHHHHHhh-hHHHHHHHc----ccch-hhhHHHH-HHHHHHhccceecCCcccchHhhcCCcCcHHHHHHHHHHHH
Confidence 333334444433 222211212 2332 2222222 33333456778999999999999996554433333333333
Q ss_pred HHHHHHHHHHHhhcCcchhhhhhhhccCCCcccccccCCccccccccccccchhHHHHHHHHHHHHhhhcccccccccee
Q 011118 210 WVEYWLFMSVYKGIPALAESSQRRIRRSMPIDMEQSTSMPRERESLLSHDENNAELAEKRWRWKIIDWISNAPCVGAWQV 289 (493)
Q Consensus 210 ~ve~~~l~~Vy~~~p~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~ 289 (493)
....+ ...|. |.+ + +..+ + ++. .+++.+
T Consensus 241 ~L~l~------vi~p~-----~~~-----~-~~~~-----~----------------~~~-~~~Ll~------------- 268 (464)
T KOG3764|consen 241 ALQLL------VIEPT-----EMD-----P-DSTE-----Q----------------GTP-MWSLLM------------- 268 (464)
T ss_pred HHHHh------eeCcc-----ccC-----c-cccc-----c----------------Ccc-HHHHHh-------------
Confidence 32221 11221 000 0 0000 0 000 111111
Q ss_pred eecccchHHHHHHHHHHHHhhhhhhHHHHHHH-HcCCCchHHHHHHHHHHHHHHHHHHHHHHHHhhhchhhhhHHHHHHH
Q 011118 290 YLKQEVVLPGVSLALLFFTVLSFGTLMTATLE-WEGIPAYIIGIARGISATIGIAATILYPILQSRISTLRTGLWSIWSQ 368 (493)
Q Consensus 290 y~~q~v~la~~alalLy~tVL~f~~l~~~yl~-~~gls~~~iG~~r~~~av~GllgT~~~~~l~~riGl~r~g~~~~~~q 368 (493)
.+-+..+..+.....++.---+.....+-. +-..+..++|+..--.++.=.+||-+++.+.+|++..| |-...+
T Consensus 269 --dP~I~~~agai~~~n~~lafLePtlslwm~e~m~~p~w~~G~~fLp~~~~y~ig~~lfg~la~k~~~~~---wl~~~~ 343 (464)
T KOG3764|consen 269 --DPYILLIAGAITFSNSSLAFLEPTLSLWMLETMFTPGWEVGLAFLPASLSYAIGTNLFGKLADKYPHLR---WLLSLG 343 (464)
T ss_pred --CchHhhhhcchhhccchHHHhCcccHHHHHHhccCCCcceeeeecccccchhccCchHHHHHHhcCchh---HHHHHH
Confidence 112344444433333222112333334444 34545559999988888999999999999999999776 222211
Q ss_pred HHHHHHHHHHHhhcchHHHHHHHHHHHHhhhchhhhhhhhhhhhhhccCCCCcch
Q 011118 369 WFCLLICVASIWIHNSLVAAYMLMVGVATSRLGLWMFDLSVIQQMQDLVPESDRC 423 (493)
Q Consensus 369 ~~~L~~~v~~~~~~~~~~s~~~l~~gi~~SR~GLw~fDl~~~~l~Qe~vp~~~rG 423 (493)
- .+..++.+...| .-.+..-+..-....++|.=+.|-+..-.+|..|++++-.
T Consensus 344 g-l~~~G~~~~~iP-~~~~~~~L~vp~~~l~~~i~~~dasl~P~l~~lvd~rh~s 396 (464)
T KOG3764|consen 344 G-LATVGVSSGPIP-FATSIAQLWVPNFGLGFGIGLADASLIPTLGYLVDPRHVS 396 (464)
T ss_pred H-HHHHHHHhchhH-hhhhHHHHhhhhHHHHHHHHHHHHHHhhhhHHhcchhhcc
Confidence 1 112222222121 0111122222233344666677988888899988776544
No 164
>PRK10077 xylE D-xylose transporter XylE; Provisional
Probab=97.07 E-value=0.031 Score=59.52 Aligned_cols=122 Identities=9% Similarity=-0.017 Sum_probs=84.7
Q ss_pred cCCCchHHHHHHHHHHHHHHHHHHHHHHHHhhhchhhhhHHHHHHHHHHHHHHHHHH-hh----cchHHHHHHHHHHHHh
Q 011118 323 EGIPAYIIGIARGISATIGIAATILYPILQSRISTLRTGLWSIWSQWFCLLICVASI-WI----HNSLVAAYMLMVGVAT 397 (493)
Q Consensus 323 ~gls~~~iG~~r~~~av~GllgT~~~~~l~~riGl~r~g~~~~~~q~~~L~~~v~~~-~~----~~~~~s~~~l~~gi~~ 397 (493)
.|.++.+.|..-+.-.++..+|+++.+++.+|+|-.|...++...-.++...+.... +. .+.......++.+=++
T Consensus 50 ~~~~~~~~~~~~s~~~ig~~~~~~~~G~l~dr~Grr~~~~~~~~l~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~~R~l 129 (479)
T PRK10077 50 ESAANSLLGFCVASALIGCIIGGALGGYCSNRFGRRDSLKIAAVLFFISALGSAWPEFGFTSIGPDNTGYVPEFVIYRII 129 (479)
T ss_pred ccCChhHHHHHHHHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHhhccccccccccchhHHHHHHHHHHH
Confidence 488999999999999999999999999999999998888777664332222221110 10 1122233444455555
Q ss_pred hhchhhhhhhhhhhhhhccCCCCcchhHHHHHHHHHHhhHHHHHHHH
Q 011118 398 SRLGLWMFDLSVIQQMQDLVPESDRCVVGGVQNSLQSTMDLMAYTMG 444 (493)
Q Consensus 398 SR~GLw~fDl~~~~l~Qe~vp~~~rG~v~gv~~sl~~~f~l~~~~~~ 444 (493)
..+|.-..-.....++.|..|+++||+..|.......+-.+...+.+
T Consensus 130 ~G~~~g~~~~~~~~~i~e~~~~~~rg~~~~~~~~~~~~G~~~~~~~~ 176 (479)
T PRK10077 130 GGIGVGLASMLSPMYIAEIAPAHIRGKLVSFNQFAIIFGQLVVYFVN 176 (479)
T ss_pred HhhhHhHHhhHHHHHHHhhCChhhhhHHHHHHHHHHHHHHHHHHHHH
Confidence 56666666788888999999999999999987665444444444443
No 165
>PRK11010 ampG muropeptide transporter; Validated
Probab=97.04 E-value=0.036 Score=60.22 Aligned_cols=144 Identities=13% Similarity=0.018 Sum_probs=85.0
Q ss_pred hhhHHHHHHHHcCCCchHHHHHHHHHHHHHHHHHHHHHHHHhhh-----chhhhhHHHHHHHHHHHHHHH-HHHhhcchH
Q 011118 312 FGTLMTATLEWEGIPAYIIGIARGISATIGIAATILYPILQSRI-----STLRTGLWSIWSQWFCLLICV-ASIWIHNSL 385 (493)
Q Consensus 312 f~~l~~~yl~~~gls~~~iG~~r~~~av~GllgT~~~~~l~~ri-----Gl~r~g~~~~~~q~~~L~~~v-~~~~~~~~~ 385 (493)
..+.+..|+.+.|.+..++|.+-.++.. ..+.++.+++..|+ |-.|.-+ +..|. ++..+. ...+.+ +.
T Consensus 31 ~~~~l~~~l~~~g~~~~~ig~~~~~~~~--~~~~~l~gpl~Dr~~~~~~Grrr~~l--l~~~i-~~~~~~~~~a~~~-~~ 104 (491)
T PRK11010 31 TSGTLQAWMTVENIDLKTIGFFSLVGQA--YVFKFLWSPLMDRYTPPFLGRRRGWL--LATQL-LLLVAIAAMGFLE-PG 104 (491)
T ss_pred HHHHHHHHHHhCCCCHHHHHHHHHHHHH--HHHHHHHHHHHHcccccCCCCchHHH--HHHHH-HHHHHHHHHHHcC-Cc
Confidence 4557888999999999999998444433 36788999999998 6433311 11122 222221 111222 11
Q ss_pred HHHHHHHHHHHhhhchhhhhhhhhhhhhhccCCCCcchhHHHHHHHHHHhhH-HHHHHHHHhccCCCCchHHHHHHHHH
Q 011118 386 VAAYMLMVGVATSRLGLWMFDLSVIQQMQDLVPESDRCVVGGVQNSLQSTMD-LMAYTMGIIISNPQDFWKLILISVIV 463 (493)
Q Consensus 386 ~s~~~l~~gi~~SR~GLw~fDl~~~~l~Qe~vp~~~rG~v~gv~~sl~~~f~-l~~~~~~ii~~~p~~F~~l~~~S~~~ 463 (493)
.+...+....++..++--..|+....+..|..|+++||+.+|+...-..+.. ++..+.+.+.+. .++|-...-+.+
T Consensus 105 ~~l~~l~~~~~l~~~~~a~~~i~~~a~~~~~~~~~~rg~~~~i~~~g~~lG~llg~~l~~~l~~~--~~GWr~~f~i~a 181 (491)
T PRK11010 105 TQLRWLAALAVVIAFCSASQDIVFDAWKTDVLPAEERGAGAAISVLGYRLAMLVSGGLALWLADR--YLGWQGMYWLMA 181 (491)
T ss_pred chHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcChhhhHHHHHHHHHHHHHHHHHHHHHHHHHHhc--ccCHHHHHHHHH
Confidence 1222222222233344457899999999999999999999999887766663 333444444431 234444443333
No 166
>TIGR00903 2A0129 major facilitator 4 family protein. This family of proteins are uncharacterized proteins from archaea. This family includes proteins from Archaeoglobus fulgidus and Aeropyrum pernix.
Probab=97.03 E-value=0.029 Score=58.57 Aligned_cols=138 Identities=16% Similarity=0.060 Sum_probs=84.8
Q ss_pred hhhhHHHHHHHHcCCCchHHHHHHHHHHHHHHHHHHHHHHHHhhhchhhhhHHHHHHHHHHHHHHHHHHhhcchHHHHHH
Q 011118 311 SFGTLMTATLEWEGIPAYIIGIARGISATIGIAATILYPILQSRISTLRTGLWSIWSQWFCLLICVASIWIHNSLVAAYM 390 (493)
Q Consensus 311 ~f~~l~~~yl~~~gls~~~iG~~r~~~av~GllgT~~~~~l~~riGl~r~g~~~~~~q~~~L~~~v~~~~~~~~~~s~~~ 390 (493)
.|+..+....++.|+++.++|..-+...++..++.+..+++.+|+|- |...+... .+...+......+. +...
T Consensus 9 ~~~~~lp~i~~~~~~s~~~~g~~~s~~~~g~~i~~~~~G~l~Dr~gr-r~~~~~~~---~~~~~~~~~~~~~~---~~~~ 81 (368)
T TIGR00903 9 TFSPVLSLVAEDIDVSKEELGLLAITYPAAFLALTIPSGLLLDRAFK-RWFLFGSL---ATFAAAAGRLLDPF---NYEW 81 (368)
T ss_pred HHHhhHHHHHHHhCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHccc-hHHHHHHH---HHHHHHHHHHHHhc---cHHH
Confidence 36667777777899999999999999899999999999999999994 43333222 11111111112211 2222
Q ss_pred HHHHHHhhhchhhhhhhhhhhhhhccCCCCcchhHHHHHHHHHHhhHHHHHHHH-HhccCCCCchHHHHH
Q 011118 391 LMVGVATSRLGLWMFDLSVIQQMQDLVPESDRCVVGGVQNSLQSTMDLMAYTMG-IIISNPQDFWKLILI 459 (493)
Q Consensus 391 l~~gi~~SR~GLw~fDl~~~~l~Qe~vp~~~rG~v~gv~~sl~~~f~l~~~~~~-ii~~~p~~F~~l~~~ 459 (493)
+..+-++-.+|.=.+ ........|..|+++||+..+...+-+.+-.++....+ .+.+ +++|-...
T Consensus 82 l~~~R~l~G~g~~~~-~~~~~~~~~~~~~~~r~~a~~~~~~~~~lG~~l~~~~~~~l~~---~~gWr~~f 147 (368)
T TIGR00903 82 LLACQLLAALGQPFL-LNAFAPAASQIREERRDLVISLLSFAMYLGIIFALAAGLKIYT---AGGLQLLI 147 (368)
T ss_pred HHHHHHHHHhHhHHH-HHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH---ccchHHHH
Confidence 222322223333222 34455568899999999999988887777744444443 4433 34554443
No 167
>TIGR00892 2A0113 monocarboxylate transporter 1.
Probab=97.02 E-value=0.019 Score=61.52 Aligned_cols=153 Identities=8% Similarity=0.006 Sum_probs=81.3
Q ss_pred HHHHHHHHHHHHHhhHHHHHHHHHHHHHhCCCchHHHHHHHHHHHHHHHhhhccceeeeccc--chhHHHHHHHHHHHHH
Q 011118 19 TTYLYVAHFLARWGARMWEFSVGLYMISVWPDSLLFAAIYGAVESASIALFGPIVGHWVDKL--TYVKVLQIWLVTQNLS 96 (493)
Q Consensus 19 ~~~L~~s~~lS~~Gdr~~~Fa~~L~lv~l~~~sll~~sv~gl~~~l~~llfg~~vG~~vDr~--~R~~v~~~~~~~q~~~ 96 (493)
++.+..+.++..++.-......|.++.+ .+-+....+..-....+..++..+..|.+.||. ++++...... +
T Consensus 243 ~~~~~~~~~l~~~~~~~~~~~l~~~~~~-~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~-----~ 316 (455)
T TIGR00892 243 FLVYLSGNVIMFLGFFAPIIFLVPYAKD-KGVDEYEAAFLLSIIGFVDIFARPSCGLIAGLKWIRPHVQYLFSF-----A 316 (455)
T ss_pred HHHHHHHHHHHHHHccchHHHHHHHHHH-cCCCHHHHHHHHHHHHHHHHHHHHHHHHHhcccccCHHHHHHHHH-----H
Confidence 4444455555555544444445666655 466777778887778888888889999999984 2333222111 0
Q ss_pred HHHHHHHHHHHHhhcccccchhHHHHHHHHHHHHHHHHHHhhhhhhhhhhccceEEEecCCCChhhhhhhhhHHHhHHHH
Q 011118 97 FIVAGVSVITLLFFSSLKSTNFIAFVLLVILTNISGAVGVISTLAGTILIEREWVVVISEGHPPEALTKMNSIIRRIDLT 176 (493)
Q Consensus 97 v~~s~~~~~~~l~~~~~~~~~~~~~~~l~~~~~~~g~~~~l~~~a~~iaieRDWvv~i~~~~~~~~L~~~Na~mrriDl~ 176 (493)
....+..++++.. . .+...+... ..+.|.......+... ++-.| .+++ ++..+.++.+......
T Consensus 317 ~~~~~l~~ll~~~----~-~~~~~~~i~---~~~~G~~~g~~~~~~~-~~~~~----~~~~---~~~g~~~g~~~~~~~l 380 (455)
T TIGR00892 317 LLFNGLTHLLCAL----A-GDYTGLVIY---CIFFGLSFGSVGALLF-EVLMD----LVGA---QRFSSAVGLVTIVECC 380 (455)
T ss_pred HHHHHHHHHHHHH----h-chHHHHHHH---HHHHHHHhchHHHHHH-HHHHH----HhhH---HHHhhHHhHHHHHHHH
Confidence 0100111011111 1 111121111 1122322222222211 11112 2232 5678889999999999
Q ss_pred HHhhhhHHHHHHHHhhh
Q 011118 177 CKLLAPAITGFIISFVS 193 (493)
Q Consensus 177 ~~l~gP~~~G~l~~~~s 193 (493)
+..+||.++|.+.+..+
T Consensus 381 g~~igp~i~G~l~~~~g 397 (455)
T TIGR00892 381 AVLIGPPLAGRLVDATK 397 (455)
T ss_pred HHHccccceeeeehhcC
Confidence 99999999999988664
No 168
>PRK14995 methyl viologen resistance protein SmvA; Provisional
Probab=97.00 E-value=0.046 Score=59.22 Aligned_cols=130 Identities=15% Similarity=0.057 Sum_probs=84.6
Q ss_pred hhHHHHHHHHcCCCchHHHHHHHHHHHHHHHHHHHHHHHHhhhchhhhhHHHHHHHHHHHHHHHHHHhhcchHHHHHHHH
Q 011118 313 GTLMTATLEWEGIPAYIIGIARGISATIGIAATILYPILQSRISTLRTGLWSIWSQWFCLLICVASIWIHNSLVAAYMLM 392 (493)
Q Consensus 313 ~~l~~~yl~~~gls~~~iG~~r~~~av~GllgT~~~~~l~~riGl~r~g~~~~~~q~~~L~~~v~~~~~~~~~~s~~~l~ 392 (493)
+.-+.....+.|.++..+++.-+.-.++...+...++++.+|+|..|.-.++... +...++.....+ + ...++
T Consensus 26 ~~a~p~i~~~l~~s~~~~~~~~~~~~l~~~~~~~~~G~l~D~~Grk~~l~~~~~~---~~~~~~~~~~a~-~---~~~li 98 (495)
T PRK14995 26 HVAAPTLSMTLGASGNELLWIIDIYSLVMAGMVLPMGALGDRIGFKRLLMLGGTL---FGLASLAAAFSP-T---ASWLI 98 (495)
T ss_pred HHHHHHHHHHhCCCHhHHHHHHHHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHH---HHHHHHHHHHcC-C---HHHHH
Confidence 3345556667999999999999988888888889999999999998888776652 222222222232 1 12222
Q ss_pred HHHHhhhchhhhhhhhhhhhh-hccCCCCcchhHHHHHHHHHHhh-HHHHHHHHHhccC
Q 011118 393 VGVATSRLGLWMFDLSVIQQM-QDLVPESDRCVVGGVQNSLQSTM-DLMAYTMGIIISN 449 (493)
Q Consensus 393 ~gi~~SR~GLw~fDl~~~~l~-Qe~vp~~~rG~v~gv~~sl~~~f-~l~~~~~~ii~~~ 449 (493)
.+-++..+|--.+-.....++ ++..|+++||+..|+..+...+. -++..+.+.+.+.
T Consensus 99 ~~r~l~G~g~~~~~~~~~~~l~~~~~~~~~r~~~~g~~~~~~~~g~~~gp~lgg~l~~~ 157 (495)
T PRK14995 99 ATRALLAIGAAMIVPATLAGIRATFTEEKQRNMALGVWAAVGSGGAAFGPLVGGILLEH 157 (495)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcc
Confidence 222233333333344444434 55668899999999998888877 5566666666554
No 169
>TIGR00880 2_A_01_02 Multidrug resistance protein.
Probab=96.97 E-value=0.0093 Score=51.00 Aligned_cols=123 Identities=19% Similarity=0.211 Sum_probs=71.6
Q ss_pred HHHHHhhhccceeeecccchhHHHHHHHHHHHHHHHHHHHHHHHHHhhcccccchhHHHHHHHHHHHHHHHHHHhhhhhh
Q 011118 63 SASIALFGPIVGHWVDKLTYVKVLQIWLVTQNLSFIVAGVSVITLLFFSSLKSTNFIAFVLLVILTNISGAVGVISTLAG 142 (493)
Q Consensus 63 ~l~~llfg~~vG~~vDr~~R~~v~~~~~~~q~~~v~~s~~~~~~~l~~~~~~~~~~~~~~~l~~~~~~~g~~~~l~~~a~ 142 (493)
.+..++.++..|.+.||.+||+.+..+.....+.. +..... ...+ .+.... .+.+.......+..
T Consensus 8 ~~~~~~~~~~~g~~~d~~g~~~~~~~~~~~~~~~~-------~~~~~~----~~~~-~~~~~~---~~~g~~~~~~~~~~ 72 (141)
T TIGR00880 8 ALGQLIYSPLSGLLTDRFGRKPVLLVGLFIFVLST-------AMFALS----SNIT-VLIIAR---FLQGFGAAFALVAG 72 (141)
T ss_pred hhHHHHHHhhHHHHHhhcchhHHHHHHHHHHHHHH-------HHHHHh----ccHH-HHHHHH---HHHHHHHHHHHHhH
Confidence 45677889999999999999998876654333321 111111 1111 111111 12233333333222
Q ss_pred hhhhccceEEEecCCCChhhhhhhhhHHHhHHHHHHhhhhHHHHHHHHhhhhHHHHHHHHHHHHHH
Q 011118 143 TILIEREWVVVISEGHPPEALTKMNSIIRRIDLTCKLLAPAITGFIISFVSLQASAMTLAIWTTVT 208 (493)
Q Consensus 143 ~iaieRDWvv~i~~~~~~~~L~~~Na~mrriDl~~~l~gP~~~G~l~~~~s~~~a~~~i~~~n~~S 208 (493)
... -.|+. ++ ++..+.|+..+........++|.+.|.+.+..+.............++
T Consensus 73 ~~~-~~~~~----~~---~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 130 (141)
T TIGR00880 73 AAL-IADIY----PP---EERGVALGLMSAGIALGPLLGPPLGGVLAQFLGWRAPFLFLAILALAA 130 (141)
T ss_pred HHH-HHHHC----Ch---hhhhHHHHHHHHhHHHHHHHhHHhHHHHhcccchHHHHHHHHHHHHHH
Confidence 222 12222 32 467889999999999999999999999998777655554444444443
No 170
>TIGR00887 2A0109 phosphate:H+ symporter. This model represents the phosphate uptake symporter subfamily of the major facilitator superfamily (pfam00083).
Probab=96.97 E-value=0.053 Score=58.75 Aligned_cols=116 Identities=11% Similarity=-0.032 Sum_probs=82.5
Q ss_pred CCCchHHHHHHHHHHHHHHHHHHHHHHHHhhhchhhhhHHHHHHHHHHHHHHHHHHhhcc--hHHHHHHHHHHHHhhhch
Q 011118 324 GIPAYIIGIARGISATIGIAATILYPILQSRISTLRTGLWSIWSQWFCLLICVASIWIHN--SLVAAYMLMVGVATSRLG 401 (493)
Q Consensus 324 gls~~~iG~~r~~~av~GllgT~~~~~l~~riGl~r~g~~~~~~q~~~L~~~v~~~~~~~--~~~s~~~l~~gi~~SR~G 401 (493)
..++...|.+-+...++.++|+++.+++.+|+|-.+.-.++.....++ .++....+. +..+...++.+-++..+|
T Consensus 52 ~~~~~~~~~~~~~~~ig~~ig~~~~g~l~d~~Grr~~~~~~~~~~~v~---~~~~~~~~~~~~~~~~~~~~~~r~l~G~~ 128 (502)
T TIGR00887 52 PLPSSVSAAVNGSASIGTLAGQLFFGWLADKLGRKRVYGMELIIMIIA---TVASGLSPGSSPKSVMATLCFWRFWLGVG 128 (502)
T ss_pred cchHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccHHHHHHHHHHHHHH---HHHHHHccCcccchHHHHHHHHHHHHHHH
Confidence 456778899999999999999999999999999877776655422222 222222221 112234556666666677
Q ss_pred hhhhhhhhhhhhhccCCCCcchhHHHHHHHHHHhhHHHHHH
Q 011118 402 LWMFDLSVIQQMQDLVPESDRCVVGGVQNSLQSTMDLMAYT 442 (493)
Q Consensus 402 Lw~fDl~~~~l~Qe~vp~~~rG~v~gv~~sl~~~f~l~~~~ 442 (493)
.-+.......+++|..|+++||+..+.......+-.++...
T Consensus 129 ~g~~~~~~~~~~~e~~p~~~Rg~~~~~~~~~~~~g~~~g~~ 169 (502)
T TIGR00887 129 IGGDYPLSAIITSEFATKKWRGAMMAAVFAMQGFGILAGAI 169 (502)
T ss_pred HhhhhHHHHHHHHHhcChhhHHHHHHHHHHHHHHHHHHHHH
Confidence 77777888999999999999999999887776665444433
No 171
>PRK10406 alpha-ketoglutarate transporter; Provisional
Probab=96.93 E-value=0.087 Score=55.80 Aligned_cols=116 Identities=10% Similarity=-0.024 Sum_probs=76.6
Q ss_pred CCCch---HHHHHHHHHHHHHHHHHHHHHHHHhhhchhhhhHHHHHHHHHHHHHHHHHHhhcch----HHHHHHHHHHHH
Q 011118 324 GIPAY---IIGIARGISATIGIAATILYPILQSRISTLRTGLWSIWSQWFCLLICVASIWIHNS----LVAAYMLMVGVA 396 (493)
Q Consensus 324 gls~~---~iG~~r~~~av~GllgT~~~~~l~~riGl~r~g~~~~~~q~~~L~~~v~~~~~~~~----~~s~~~l~~gi~ 396 (493)
+.++. .++...+++.++..+|.++++++..|+|-.|+..+++.. +...++...+.++- ..+...++..=+
T Consensus 56 ~~~~~~~~~~~~~~~~~~~~~~ig~~~~G~l~Dr~Grr~~l~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~l~~~R~ 132 (432)
T PRK10406 56 GNTTTQLLQTAGVFAAGFLMRPIGGWLFGRIADKHGRKKSMLISVCM---MCFGSLVIACLPGYETIGTWAPALLLLARL 132 (432)
T ss_pred CCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCcHHHHHHHHHH---HHHHHHHHhhcCCchhHHHHHHHHHHHHHH
Confidence 45554 455566777777779999999999999999988777752 22222232222221 123344445555
Q ss_pred hhhchhhhhhhhhhhhhhccCCCCcchhHHHHHHHHHHhhHHHHHH
Q 011118 397 TSRLGLWMFDLSVIQQMQDLVPESDRCVVGGVQNSLQSTMDLMAYT 442 (493)
Q Consensus 397 ~SR~GLw~fDl~~~~l~Qe~vp~~~rG~v~gv~~sl~~~f~l~~~~ 442 (493)
+..+|.=..-.+...++-|..|+++||+..+......+.-.++...
T Consensus 133 l~G~g~g~~~~~~~~~i~e~~p~~~rg~~~~~~~~~~~~G~~~~~~ 178 (432)
T PRK10406 133 FQGLSVGGEYGTSATYMSEVAVEGRKGFYASFQYVTLIGGQLLALL 178 (432)
T ss_pred HHHhhhhhhHhhHHHHHHHhCCCCcccHHHHHHHHHHHHHHHHHHH
Confidence 5556655566778899999999999999988876665555444443
No 172
>PRK15011 sugar efflux transporter B; Provisional
Probab=96.93 E-value=0.055 Score=56.46 Aligned_cols=154 Identities=12% Similarity=0.139 Sum_probs=80.5
Q ss_pred HHHHHHHHHHhhHHHHHHHHHHHHHhCCCchHHHHHHHHHHHHHHHhhhccceeeecccchhHHHHHHHHHHHHHHHHHH
Q 011118 22 LYVAHFLARWGARMWEFSVGLYMISVWPDSLLFAAIYGAVESASIALFGPIVGHWVDKLTYVKVLQIWLVTQNLSFIVAG 101 (493)
Q Consensus 22 L~~s~~lS~~Gdr~~~Fa~~L~lv~l~~~sll~~sv~gl~~~l~~llfg~~vG~~vDr~~R~~v~~~~~~~q~~~v~~s~ 101 (493)
+....++.....-.+....|.++.+.++-+....+.+-....+..++.....|.+.||++||+.+....+. . ++.+
T Consensus 221 ~~~~~~~~~~~~~~~~~~~p~~l~~~~~~~~~~~g~~~~~~~~~~i~~~~~~G~l~dr~g~~~~~~~~~~~---~-~~~~ 296 (393)
T PRK15011 221 LFVICTLMWGTNSLYIINMPLFIINELHLPEKLAGVMMGTAAGLEIPTMLIAGYFAKRLGKRFLMRVAAVA---G-VCFY 296 (393)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhChHHHHHHHHHH---H-HHHH
Confidence 33334444444445556678777776666666666665555566667788999999999999876554321 1 1111
Q ss_pred HHHHHHHhhcccccchhHHHHHHHHHHHHHHHHHHhhhhhhhhhhccceEEEecCCCChhhhhhhhhHHHhHHHHHHhhh
Q 011118 102 VSVITLLFFSSLKSTNFIAFVLLVILTNISGAVGVISTLAGTILIEREWVVVISEGHPPEALTKMNSIIRRIDLTCKLLA 181 (493)
Q Consensus 102 ~~~~~~l~~~~~~~~~~~~~~~l~~~~~~~g~~~~l~~~a~~iaieRDWvv~i~~~~~~~~L~~~Na~mrriDl~~~l~g 181 (493)
...... . ..+......++.....+ ...... ... -.|.. ++ +..+.++.+..+-.....+|
T Consensus 297 ---~~~~~~---~-~~~~~l~~~~l~~~~~g---~~~~~~-~~~-~~~~~----p~----~~g~~~~~~~~~~~lg~~~g 356 (393)
T PRK15011 297 ---AGMLMA---H-SPAILLGLQLLNAIYIG---ILGGIG-MLY-FQDLM----PG----QAGSATTLYTNTSRVGWIIA 356 (393)
T ss_pred ---HHHHHH---h-hHHHHHHHHHHHHHHHH---HHHHHH-HHH-HHHhC----CC----CcchHHHHHHHHHHHHHHHH
Confidence 111111 1 11111111111111111 111111 111 11222 22 23455555555566788999
Q ss_pred hHHHHHHHHhhhhHHHHH
Q 011118 182 PAITGFIISFVSLQASAM 199 (493)
Q Consensus 182 P~~~G~l~~~~s~~~a~~ 199 (493)
|.++|.+.+..|.+....
T Consensus 357 ~~l~G~i~~~~g~~~~~~ 374 (393)
T PRK15011 357 GSLAGIVAEIWNYHAVFW 374 (393)
T ss_pred HHHHHHHHHHhhhHHHHH
Confidence 999999999877665543
No 173
>PRK09556 uhpT sugar phosphate antiporter; Reviewed
Probab=96.91 E-value=0.011 Score=63.24 Aligned_cols=137 Identities=9% Similarity=-0.052 Sum_probs=86.5
Q ss_pred HHHHHHHHHHhhhhhhHHHHHHHHcCCCchHHHHHHHHHHHHHHHHHHHHHHHHhhhchhhhhHHHHHHHHHHHHHHHHH
Q 011118 299 GVSLALLFFTVLSFGTLMTATLEWEGIPAYIIGIARGISATIGIAATILYPILQSRISTLRTGLWSIWSQWFCLLICVAS 378 (493)
Q Consensus 299 ~~alalLy~tVL~f~~l~~~yl~~~gls~~~iG~~r~~~av~GllgT~~~~~l~~riGl~r~g~~~~~~q~~~L~~~v~~ 378 (493)
.+++.+.|+.-..++..+....++.|+++.++|..-++..++..++....+++..|+|..|.-..++..- .+......
T Consensus 35 ~~~~~~~y~~r~~~~~~~~~i~~~~~~s~~~~g~~~s~~~~~~~~~~~~~G~l~Dr~g~r~~l~~~~~~~--~~~~~~~~ 112 (467)
T PRK09556 35 FIGYLTMYLIRKNFKAAQNDMISTYGLSTTELGMIGLGFSITYGVGKTLVGYYADGKNTKQFLPFLLILS--AICMLGFG 112 (467)
T ss_pred HHHHHHHHHHhcChhhhhHHHHHhcCCCHHHHHHHHHHHHHHHHHHHhhhhhHhhccCccchHHHHHHHH--HHHHHHHH
Confidence 3333444444445666677666789999999999999999999999999999999999888765554311 11111111
Q ss_pred HhhcchHHHHHHHHHHHHhhhchhhhhhhhhhhhhhccCCCCcchhHHHHHHHHHHhhH
Q 011118 379 IWIHNSLVAAYMLMVGVATSRLGLWMFDLSVIQQMQDLVPESDRCVVGGVQNSLQSTMD 437 (493)
Q Consensus 379 ~~~~~~~~s~~~l~~gi~~SR~GLw~fDl~~~~l~Qe~vp~~~rG~v~gv~~sl~~~f~ 437 (493)
........+...++..-.+.++|--..-.+...++-+..|+++||+.+|+..+..++..
T Consensus 113 ~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~rg~a~gi~~~~~~lG~ 171 (467)
T PRK09556 113 ASLGSGSVSLGLMIALWALSGFFQSTGGPCSYSTITRWTPRRKRGRFLGFWNISHNLGG 171 (467)
T ss_pred HHHhcccchHHHHHHHHHHHHHHHhccchHHHHHHHHHcCccceeeeEEeeecccchhh
Confidence 11000001222222332333333333345667789999999999999998877666553
No 174
>PF05977 MFS_3: Transmembrane secretion effector; InterPro: IPR010290 This family consists of the enterobactin exporter EntS proteins and putative permeases all belonging to the major facilitator superfamily. EntS exports the siderophore enterobactin out of the cell. The genetic locus entS was changed from ybdA so as to reflect its relevant biological function [].
Probab=96.91 E-value=0.031 Score=61.47 Aligned_cols=155 Identities=14% Similarity=0.108 Sum_probs=103.0
Q ss_pred ecccchHHHHHHHHHHHHhhhhhhHHHH-HHHHcCCCchHHHHHHHHHHHHHHHHHHHHHHHHhhhchhhhhHHHHHHHH
Q 011118 291 LKQEVVLPGVSLALLFFTVLSFGTLMTA-TLEWEGIPAYIIGIARGISATIGIAATILYPILQSRISTLRTGLWSIWSQW 369 (493)
Q Consensus 291 ~~q~v~la~~alalLy~tVL~f~~l~~~-yl~~~gls~~~iG~~r~~~av~GllgT~~~~~l~~riGl~r~g~~~~~~q~ 369 (493)
+|||.|+....-.++-..--.+..+... |.++..=|+..+|+...+..+--++-+..++.+..|+.-.|..+++-.++.
T Consensus 7 lr~~~Fr~lw~a~~iS~lG~~~~~va~~wlv~~lt~S~~~valv~~a~~LP~~Llsl~aG~laDr~drrrili~~~~~~~ 86 (524)
T PF05977_consen 7 LRNRNFRRLWIAQLISNLGDWMQTVALAWLVTQLTGSPLMVALVQAASTLPILLLSLFAGALADRFDRRRILILSQLLRA 86 (524)
T ss_pred ccCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHhhcccchHHHHHHHHHHH
Confidence 5788888776655544322222233333 333566789999999999999999999999999999998888877666554
Q ss_pred HHHH-HHHHHHhhcchHHHHHHHHHHHHhhhchhhhhhhhhhhhhhccCCCCcchhHHHHHHHHHHhhH-HHHHHHHHhc
Q 011118 370 FCLL-ICVASIWIHNSLVAAYMLMVGVATSRLGLWMFDLSVIQQMQDLVPESDRCVVGGVQNSLQSTMD-LMAYTMGIII 447 (493)
Q Consensus 370 ~~L~-~~v~~~~~~~~~~s~~~l~~gi~~SR~GLw~fDl~~~~l~Qe~vp~~~rG~v~gv~~sl~~~f~-l~~~~~~ii~ 447 (493)
++.. .+++ .+.+ ..+...+++..++..+|--.++.+.+.++.+.||+++....++......|+.. ++--+.|++.
T Consensus 87 ~~~~~L~~l-~~~~--~~~~~~Ll~~~fl~g~~~a~~~PA~~A~ip~lV~~~~L~~A~al~s~~~niar~iGPalgG~Lv 163 (524)
T PF05977_consen 87 LVALLLAVL-AFFG--LLSPWLLLILTFLLGIGSAFFNPAWQAIIPELVPKEDLPAANALNSISFNIARIIGPALGGILV 163 (524)
T ss_pred HHHHHHHHH-HHhC--cCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccHhhHHHHHHHHHHHHHHHHhccchHHHHHH
Confidence 3222 2222 2222 12222233333444455667799999999999999999999998887777773 3434555554
Q ss_pred c
Q 011118 448 S 448 (493)
Q Consensus 448 ~ 448 (493)
.
T Consensus 164 a 164 (524)
T PF05977_consen 164 A 164 (524)
T ss_pred H
Confidence 4
No 175
>PRK15034 nitrate/nitrite transport protein NarU; Provisional
Probab=96.88 E-value=0.077 Score=57.42 Aligned_cols=118 Identities=11% Similarity=0.099 Sum_probs=80.8
Q ss_pred hhhhhHHHHHHH-HcCCCchHHHHHHHHHHHHHHHHHHHHHHHHhhhchhhhhHHHHHHHHHHHHHHHHHHhh-c---ch
Q 011118 310 LSFGTLMTATLE-WEGIPAYIIGIARGISATIGIAATILYPILQSRISTLRTGLWSIWSQWFCLLICVASIWI-H---NS 384 (493)
Q Consensus 310 L~f~~l~~~yl~-~~gls~~~iG~~r~~~av~GllgT~~~~~l~~riGl~r~g~~~~~~q~~~L~~~v~~~~~-~---~~ 384 (493)
..++.+.+.+-+ +.|+|++++|.+.++-.+.|-++-+.++++..|+|..|...++.. .+..+.....+. + ++
T Consensus 51 ~~~~~l~~~~~~~~~~ls~~q~g~l~ai~~l~~al~rip~G~l~Dr~G~R~v~~~~~l---l~~i~~~~~~~a~~~~~~s 127 (462)
T PRK15034 51 MLFSAVTVNLNKIGFNFTTDQLFLLTALPSVSGALLRVPYSFMVPIFGGRRWTVFSTA---ILIIPCVWLGIAVQNPNTP 127 (462)
T ss_pred HHHHHHHHHhhhhhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCChHHHHHHHH---HHHHHHHHHHHHHcccCCC
Confidence 456667665555 699999999999999888888888899999999999988877765 233333333332 1 12
Q ss_pred HHH--HHHHHHHHHhhhchhhhhhhhhhhhhhccCCCCcchhHHHHHHHHHHhh
Q 011118 385 LVA--AYMLMVGVATSRLGLWMFDLSVIQQMQDLVPESDRCVVGGVQNSLQSTM 436 (493)
Q Consensus 385 ~~s--~~~l~~gi~~SR~GLw~fDl~~~~l~Qe~vp~~~rG~v~gv~~sl~~~f 436 (493)
... +.-++.|+ |- ..-......+.+.-|+++||+..|+.....+.-
T Consensus 128 ~~~lli~r~l~Gi-----gg-~~f~~~~~~vs~wfp~~~rG~A~Gi~~g~G~~G 175 (462)
T PRK15034 128 FGIFIVIALLCGF-----AG-ANFASSMGNISFFFPKAKQGSALGINGGLGNLG 175 (462)
T ss_pred HHHHHHHHHHHHH-----HH-HhHHHHHHHHHHHCCHhHhHHHHHHHHHHHhhH
Confidence 222 22223333 21 123667778888999999999999986544433
No 176
>PTZ00207 hypothetical protein; Provisional
Probab=96.85 E-value=0.047 Score=60.79 Aligned_cols=121 Identities=13% Similarity=0.146 Sum_probs=80.3
Q ss_pred hhhhHHHHHHH-HcCCCchHHHHHHHHHHHHHHHHHHHHHHHHhhhchhhhhHHHHHHHHHHHHHHHHHHhh-cch-HHH
Q 011118 311 SFGTLMTATLE-WEGIPAYIIGIARGISATIGIAATILYPILQSRISTLRTGLWSIWSQWFCLLICVASIWI-HNS-LVA 387 (493)
Q Consensus 311 ~f~~l~~~yl~-~~gls~~~iG~~r~~~av~GllgT~~~~~l~~riGl~r~g~~~~~~q~~~L~~~v~~~~~-~~~-~~s 387 (493)
+|+.... .++ +.|++..+++.+-+++...|. ..+.++++..|+|..+...++... +....+...+. .+. ..+
T Consensus 45 ~fsv~s~-~L~~~lgls~~~l~~i~svg~~~g~-~~lp~G~L~Dr~G~R~vllig~ll---~~iG~ll~ala~~~~i~~s 119 (591)
T PTZ00207 45 AFNLISG-AMQARYNLTQRDLSTITTVGIAVGY-FLLPYSFIYDYLGPRPIFVLSMTV---FCLGTLLFALTFQEVIEGS 119 (591)
T ss_pred HHHHHHH-HHHHHhCcCHHHHHHHHHHHHHHHH-HHHHHHHHHHHhCcHHHHHHHHHH---HHHHHHHHHHHhcccccCc
Confidence 4443333 445 689999999999988877775 455689999999998888777652 22222221111 100 012
Q ss_pred HHHHHHHHHhhhchhhhhhhhhhhhhhccCCCCcchhHHHHHHHHHHhhH
Q 011118 388 AYMLMVGVATSRLGLWMFDLSVIQQMQDLVPESDRCVVGGVQNSLQSTMD 437 (493)
Q Consensus 388 ~~~l~~gi~~SR~GLw~fDl~~~~l~Qe~vp~~~rG~v~gv~~sl~~~f~ 437 (493)
...+....++..+|--.+|........++.| ++||++.|+..+...+-.
T Consensus 120 ~~~l~l~r~l~G~G~~~~~~~~~~~i~~~Fp-~~RG~a~Gi~~~~~gLGs 168 (591)
T PTZ00207 120 VVRLSVYNGLMTLGCMLFDLGAVVTVLSVFP-SNRGAVVAIMKTFTGLGS 168 (591)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHhCh-hhhHHHHHHHHHHHHHHH
Confidence 3333344445556666778888888888887 679999999988887774
No 177
>KOG4686 consensus Predicted sugar transporter [Carbohydrate transport and metabolism]
Probab=96.81 E-value=0.48 Score=48.23 Aligned_cols=181 Identities=15% Similarity=0.144 Sum_probs=100.0
Q ss_pred cchHHHHHHHHHH-HHhhhhhhHHHHHHH-HcCCCchHHHHHHHHHHHHHHHHHHHHHHHHhhhchhhhhHHHHHHHHHH
Q 011118 294 EVVLPGVSLALLF-FTVLSFGTLMTATLE-WEGIPAYIIGIARGISATIGIAATILYPILQSRISTLRTGLWSIWSQWFC 371 (493)
Q Consensus 294 ~v~la~~alalLy-~tVL~f~~l~~~yl~-~~gls~~~iG~~r~~~av~GllgT~~~~~l~~riGl~r~g~~~~~~q~~~ 371 (493)
|.|...+.++.+| ..+.+|-++-..|-. .-|+|+..-|...+.--.....-.-+++.+..++|-. -+|-...-...
T Consensus 264 ppfw~~~iicv~yyva~fPFi~lg~~fF~~rfGlS~~~a~~i~s~vy~Isav~spvfg~i~Dk~G~n--~~wv~~a~~~t 341 (459)
T KOG4686|consen 264 PPFWVLVIICVLYYVAWFPFITLGPMFFQKRFGLSAVSAGNILSTVYGISAVLSPVFGAISDKYGFN--LWWVASACILT 341 (459)
T ss_pred ccHHHHHHHHHHHHHHHHHHhhhhHHHHHHhhCCChhhccchhhhhhhhhhhhhhhHHHhHhhhcce--ehhHHHHHHHH
Confidence 5677777777776 667888887777776 4799877555444331111111123456677788733 33333211122
Q ss_pred HHHHHHHHhh-cchHHHHHHHHHHHHhhhchhhhhhhhhhhhhhccCCCCcchhHHHHHHHHHHhh-HHHHHHHHHhccC
Q 011118 372 LLICVASIWI-HNSLVAAYMLMVGVATSRLGLWMFDLSVIQQMQDLVPESDRCVVGGVQNSLQSTM-DLMAYTMGIIISN 449 (493)
Q Consensus 372 L~~~v~~~~~-~~~~~s~~~l~~gi~~SR~GLw~fDl~~~~l~Qe~vp~~~rG~v~gv~~sl~~~f-~l~~~~~~ii~~~ 449 (493)
+..-....++ -.|+.+..++-....+--..+| ..+--.|||++.|+..|...|+||+- .....+.+++...
T Consensus 342 l~~H~~l~Ft~lsPy~~m~~lGLsysllAcslW-------P~va~~vpE~qLGTaygf~qsIqNLgla~i~Iiag~i~d~ 414 (459)
T KOG4686|consen 342 LLGHSGLFFTFLSPYTSMTFLGLSYSLLACSLW-------PCVASLVPEEQLGTAYGFIQSIQNLGLAFIPIIAGFIADG 414 (459)
T ss_pred HHHhhhHHhhhccHHHHHHHHhhhHHHHHHHHh-------hhhhhhCCHHHhcchHHHHHHHHhhhhhHHhhhhheeecC
Confidence 2221111222 1244444332222222223345 34556789999999999999999998 9999999999877
Q ss_pred CCCchHHHHHHHHHHHHHH---HHHHHHHHHhhcCCC
Q 011118 450 PQDFWKLILISVIVVTLAA---ILYTFHLYRIRKHLF 483 (493)
Q Consensus 450 p~~F~~l~~~S~~~V~~~~---~l~~~~~~~~Rghl~ 483 (493)
-+...++=..=.+.+..+. .+...+-+|.||.|.
T Consensus 415 ~g~y~~le~ffl~~~~~aL~svgil~~~N~kq~gnLN 451 (459)
T KOG4686|consen 415 DGSYDNLEAFFLIIGLMALTSVGILFYLNKKQSGNLN 451 (459)
T ss_pred CCchhhHHHHHHHHHHHHHHHHHHHhheeccccCCCC
Confidence 7654443222222222211 122233466777765
No 178
>TIGR00894 2A0114euk Na(+)-dependent inorganic phosphate cotransporter.
Probab=96.80 E-value=0.015 Score=62.13 Aligned_cols=121 Identities=10% Similarity=0.001 Sum_probs=81.6
Q ss_pred HcCCCchHHHHHHHHHHHHHHHHHHHHHHHHhhhchhhhhHHHHHHHHHHHHHHHHHHhhcchHHHHHHHHHHHHhhhch
Q 011118 322 WEGIPAYIIGIARGISATIGIAATILYPILQSRISTLRTGLWSIWSQWFCLLICVASIWIHNSLVAAYMLMVGVATSRLG 401 (493)
Q Consensus 322 ~~gls~~~iG~~r~~~av~GllgT~~~~~l~~riGl~r~g~~~~~~q~~~L~~~v~~~~~~~~~~s~~~l~~gi~~SR~G 401 (493)
+.|+++...|.+.++-.++.+++.+..+++.+|+|..+...++.. ++.....+..+... .+...++..-++..+|
T Consensus 70 ~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~g~r~~l~~~~~---~~~~~~~~~~~~~~--~~~~~l~~~r~~~G~~ 144 (465)
T TIGR00894 70 NFKWSGALQGLILSSHFYGQIIIQIPVGYLAGKYVFKWSIGIGMF---LSSVISIVIPWAAG--GGIALVVFCRVIQGLA 144 (465)
T ss_pred CCCCCHHHhhHHHHHHHHHHHHHHcchHHHHHHhCcchhhHHHHH---HHHHHHHHHHHHHH--cCchHHHHHHHHHHHh
Confidence 467899999999999999999999999999999998877665553 22222222222110 0112223333333344
Q ss_pred hhhhhhhhhhhhhccCCCCcchhHHHHHHHHHHhh-HHHHHHHHHhc
Q 011118 402 LWMFDLSVIQQMQDLVPESDRCVVGGVQNSLQSTM-DLMAYTMGIII 447 (493)
Q Consensus 402 Lw~fDl~~~~l~Qe~vp~~~rG~v~gv~~sl~~~f-~l~~~~~~ii~ 447 (493)
--..-.....++.+..|+++||+.+|...+..++. -++..+.+.+.
T Consensus 145 ~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~i~~~l~~~l~ 191 (465)
T TIGR00894 145 QGSVSPATHKIIVKWAPPKERSRLLGMSTSGFQLGTFIFLPISGWLC 191 (465)
T ss_pred cccchhhHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 44556778889999999999999999998877666 44555555554
No 179
>PRK15403 multidrug efflux system protein MdtM; Provisional
Probab=96.70 E-value=0.086 Score=55.68 Aligned_cols=121 Identities=10% Similarity=0.066 Sum_probs=78.2
Q ss_pred HHHHcCCCchHHHHHHHHHHHHHHHHHHHHHHHHhhhchhhhhHHHHHHHHHHHHHHHHHHhhcch-HHHHHHHHHHHHh
Q 011118 319 TLEWEGIPAYIIGIARGISATIGIAATILYPILQSRISTLRTGLWSIWSQWFCLLICVASIWIHNS-LVAAYMLMVGVAT 397 (493)
Q Consensus 319 yl~~~gls~~~iG~~r~~~av~GllgT~~~~~l~~riGl~r~g~~~~~~q~~~L~~~v~~~~~~~~-~~s~~~l~~gi~~ 397 (493)
...+.|.++...+...++-.+++.++.+..+++.+|+|-.|.-.++... +...++...+.++. ...+.-++.|+..
T Consensus 42 i~~~~~~~~~~~~~~~s~~~~~~~~~~~~~G~l~dr~Grr~~l~~~~~~---~~~~~~~~~~a~~~~~l~~~r~l~Gi~~ 118 (413)
T PRK15403 42 VVRDFNADVSLAPASVSLYLAGGMALQWLLGPLSDRIGRRPVLITGALI---FTLACAATLFTTSMTQFLIARFIQGTSI 118 (413)
T ss_pred HHHHhCCCHHHHHHHHHHHHHHHHHHHHhhhHHHHHcCchHHHHHHHHH---HHHHHHHHHHcCCHHHHHHHHHHHHHHH
Confidence 3346799999999999999999999999999999999988877666542 22222222333321 1122223333322
Q ss_pred hhchhhhhhhhhhhhhhccCCCCcchhHHHHHHHHHHhhHHHHH-HHHHhc
Q 011118 398 SRLGLWMFDLSVIQQMQDLVPESDRCVVGGVQNSLQSTMDLMAY-TMGIII 447 (493)
Q Consensus 398 SR~GLw~fDl~~~~l~Qe~vp~~~rG~v~gv~~sl~~~f~l~~~-~~~ii~ 447 (493)
| .+-.....+.+|..|+++|++..+...+..++...... +.+.+.
T Consensus 119 ---~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~lg~~l~ 164 (413)
T PRK15403 119 ---C--FIATVGYVTVQEAFGQTKGIKLMAIITSIVLVAPIIGPLSGAALM 164 (413)
T ss_pred ---H--HHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 1 11233345788889999999999988888777744444 344444
No 180
>TIGR00889 2A0110 nucleoside transporter. This family of proteins transports nucleosides at a high affinity. The transport mechanism is driven by proton motive force. This family includes nucleoside permease NupG and xanthosine permease from E.Coli.
Probab=96.66 E-value=0.051 Score=57.58 Aligned_cols=122 Identities=14% Similarity=0.163 Sum_probs=71.4
Q ss_pred HHHHHHHHHHHHHHHhhhccceeeecccchhHHHHHHHHHHHHHHHHHHHHHHHHHhhcccccchhHHHHHHHHHHHHHH
Q 011118 53 LFAAIYGAVESASIALFGPIVGHWVDKLTYVKVLQIWLVTQNLSFIVAGVSVITLLFFSSLKSTNFIAFVLLVILTNISG 132 (493)
Q Consensus 53 l~~sv~gl~~~l~~llfg~~vG~~vDr~~R~~v~~~~~~~q~~~v~~s~~~~~~~l~~~~~~~~~~~~~~~l~~~~~~~g 132 (493)
-.++....+..++.++....+|++.||.+||+++..+.+...+. .. +.... .. .+..+..+++...+.+
T Consensus 251 ~~~g~~~~~~~i~~i~~~~~~g~l~dr~g~r~~l~~~~~~~~v~----~~---l~~~~---~~-~~~~~~~l~l~~~l~g 319 (418)
T TIGR00889 251 KNASIWMSLSQFSEIFFILTIPFFLKRFGIKKVMLLSLVAWALR----FG---FFAYG---DP-EYFGYALLFLSMIVYG 319 (418)
T ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHHhCcHHHHHHHHHHHHHH----HH---HHHHc---Cc-chhhHHHHHHHHHHHH
Confidence 44466666666777888899999999999999988876433222 11 11111 11 1111111222222334
Q ss_pred HHHHhhhhhhhhhhccceEEEecCCCChhhhhhhhhHHH-hHHHHHHhhhhHHHHHHHHhhh
Q 011118 133 AVGVISTLAGTILIEREWVVVISEGHPPEALTKMNSIIR-RIDLTCKLLAPAITGFIISFVS 193 (493)
Q Consensus 133 ~~~~l~~~a~~iaieRDWvv~i~~~~~~~~L~~~Na~mr-riDl~~~l~gP~~~G~l~~~~s 193 (493)
....+..+..... -.||. ++ +...+.++.+. -.-.....+||.++|.+.+..|
T Consensus 320 ~~~~~~~~~~~~~-i~~~~----p~---~~~g~~~g~~~~~~~~lg~~iGp~l~G~l~~~~g 373 (418)
T TIGR00889 320 CAFDFFNISGSVF-VEKEV----PV---HIRASAQGLFTLMCNGFGSLLGYILSGVMVEKMF 373 (418)
T ss_pred HHHHHHHHHHHHH-HHHHC----CH---HHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHhc
Confidence 4444444343332 23343 22 56788888886 4567889999999999998753
No 181
>TIGR00792 gph sugar (Glycoside-Pentoside-Hexuronide) transporter. GPH:cation symporters catalyze uptake of sugars in symport with a monovalent cation (H+ or Na+). Members of this family includes transporters for melibiose, lactose, raffinose, glucuronides, pentosides and isoprimeverose. Mutants of two groups of these symporters (the melibiose permeases of enteric bacteria, and the lactose permease of Streptococcus thermophilus) have been isolated in which altered cation specificity is observed or in which sugar transport is uncoupled from cation symport (i.e., uniport is catalyzed). The various members of the family can use Na+, H+ or Li, Na+ or Li+, H+ or Li+, or only H+ as the symported cation. All of these proteins possess twelve putative transmembrane a-helical spanners.
Probab=96.55 E-value=0.058 Score=56.60 Aligned_cols=161 Identities=13% Similarity=0.007 Sum_probs=88.2
Q ss_pred hhHHHHHHHHHHHHHhhHHHHHHHHHHHHHhCCCchHHHHHHHHHHHHHHHhhhccceeeecccchhHHHHHHHHHHHHH
Q 011118 17 FLTTYLYVAHFLARWGARMWEFSVGLYMISVWPDSLLFAAIYGAVESASIALFGPIVGHWVDKLTYVKVLQIWLVTQNLS 96 (493)
Q Consensus 17 ~~~~~L~~s~~lS~~Gdr~~~Fa~~L~lv~l~~~sll~~sv~gl~~~l~~llfg~~vG~~vDr~~R~~v~~~~~~~q~~~ 96 (493)
|.++.+....++...+...+....+.+...... +....+.+.....++.++..+..|.+.||.+||+++..+.+...+.
T Consensus 222 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~i~~ii~~~~~~~l~~r~g~~~~~~~~~~~~~~~ 300 (437)
T TIGR00792 222 DQLLILCLAYLFYNLAFNIKNGVQVYYFTYVLG-DPELFSYMGSIAIVAGLIGVLLFPRLVKKFGRKILFAGGILLMVLG 300 (437)
T ss_pred HHHHHHHHHHHHHHHHHHHHcchhheeEeeecC-ChHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcHHHHHHHHHHHHHH
Confidence 455666777777777766655544554444443 3344566666678889999999999999999999887765332222
Q ss_pred HHHHHHHHHHHHhhcccccchhHHHHHHHHHHHHHHHHHHhhhhhhhhhhccceEEEec-CCCChhhhhhhhhHHHhHHH
Q 011118 97 FIVAGVSVITLLFFSSLKSTNFIAFVLLVILTNISGAVGVISTLAGTILIEREWVVVIS-EGHPPEALTKMNSIIRRIDL 175 (493)
Q Consensus 97 v~~s~~~~~~~l~~~~~~~~~~~~~~~l~~~~~~~g~~~~l~~~a~~iaieRDWvv~i~-~~~~~~~L~~~Na~mrriDl 175 (493)
... . ... ....+..+...+ +.+.......+... ++-.|-++.-- +.++ ++-...++...-.+.
T Consensus 301 ----~~~--~-~~~---~~~~~~~~~~~~----~~g~~~~~~~~~~~-~~~~~~~~~~~~~~~~-~~~G~~~~~~~~~~~ 364 (437)
T TIGR00792 301 ----YLI--F-FFA---GSNLPLILVLII----LAGFGQNFVTGLVW-ALVADTVDYGEWKTGV-RAEGLVYSVRTFVRK 364 (437)
T ss_pred ----HHH--H-HHc---chhHHHHHHHHH----HHHHHHHHHHHHHH-HHHhhhhhhhhhhcCc-cchHHHHHHHHHHHH
Confidence 111 1 111 111111111111 11222111111111 11111111000 0111 335667788888889
Q ss_pred HHHhhhhHHHHHHHHhhhh
Q 011118 176 TCKLLAPAITGFIISFVSL 194 (493)
Q Consensus 176 ~~~l~gP~~~G~l~~~~s~ 194 (493)
++..+||.+.|.+.+..|+
T Consensus 365 ~g~~lg~~i~g~ll~~~G~ 383 (437)
T TIGR00792 365 LGQALAGFLVGLILGIIGY 383 (437)
T ss_pred HHHHHHHHHHHHHHHHcCC
Confidence 9999999999999987664
No 182
>TIGR00883 2A0106 metabolite-proton symporter. This model represents the metabolite:H+ symport subfamily of the major facilitator superfamily (pfam00083), including citrate-H+ symporters, dicarboxylate:H+ symporters, the proline/glycine-betaine transporter ProP, etc.
Probab=96.53 E-value=0.045 Score=55.64 Aligned_cols=71 Identities=13% Similarity=-0.031 Sum_probs=53.9
Q ss_pred HHHHHHHHHHHHHhhHHHHHHHHHHHHHhCCCchHHHHHHHHHHHHHHHhhhccceeeecccchhHHHHHH
Q 011118 19 TTYLYVAHFLARWGARMWEFSVGLYMISVWPDSLLFAAIYGAVESASIALFGPIVGHWVDKLTYVKVLQIW 89 (493)
Q Consensus 19 ~~~L~~s~~lS~~Gdr~~~Fa~~L~lv~l~~~sll~~sv~gl~~~l~~llfg~~vG~~vDr~~R~~v~~~~ 89 (493)
+.......++...+...+....|.++.+.++.+....+.......+..++..+..|.+.||.+||+.+...
T Consensus 221 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~~~~~~~~ 291 (394)
T TIGR00883 221 FLLGLGLVIATTTTFYLITTYLPTYLTQTLGLSANSALLVLMLSLILFFITIPLSGALSDRIGRRPVLIIF 291 (394)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHhchHHHHHHH
Confidence 44555566666666767777788888776666667777777777888888899999999999999876544
No 183
>KOG0254 consensus Predicted transporter (major facilitator superfamily) [General function prediction only]
Probab=96.49 E-value=1.7 Score=47.26 Aligned_cols=118 Identities=13% Similarity=0.100 Sum_probs=70.9
Q ss_pred HHHHHHcCCCchHHHHHHHHHHHHHHHHHHHHHHHHhhhchhhhhHHHHHHHHHHHHHHHHH-Hhhcc--------hHHH
Q 011118 317 TATLEWEGIPAYIIGIARGISATIGIAATILYPILQSRISTLRTGLWSIWSQWFCLLICVAS-IWIHN--------SLVA 387 (493)
Q Consensus 317 ~~yl~~~gls~~~iG~~r~~~av~GllgT~~~~~l~~riGl~r~g~~~~~~q~~~L~~~v~~-~~~~~--------~~~s 387 (493)
....++.|.+... ...--+-++..+.+|+++..+.+|+|-.+..+++...+.+|....... ..... ....
T Consensus 319 ~~if~~~g~~~~~-~~~~~~~~~v~~~~t~~~~~lvd~~gRr~lll~s~~~m~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 397 (513)
T KOG0254|consen 319 TTIFKSAGLKSDT-FLASIILGVVNFLGTLVATYLVDRFGRRKLLLFGAAGMSICLVILAVVGVFALYYPNSSKGAGWLA 397 (513)
T ss_pred HHHHHhcCCCCch-HHHHHHHHHHHHHHHHHHHHHHHHhccHHHHHHhHHHHHHHHHHHHHHHHHhccCCCcccchhHHH
Confidence 3345567777543 222223334667888888999999998777777777666665543332 22111 1112
Q ss_pred HHHHHHHHHhhhchhhhhhhhhhhhhhccCCCCcchhHHHHHHHHHHhhHH
Q 011118 388 AYMLMVGVATSRLGLWMFDLSVIQQMQDLVPESDRCVVGGVQNSLQSTMDL 438 (493)
Q Consensus 388 ~~~l~~gi~~SR~GLw~fDl~~~~l~Qe~vp~~~rG~v~gv~~sl~~~f~l 438 (493)
+.....-+. ..-++....-..+.=|..|.+.|+...+.-.+.|+++..
T Consensus 398 ~~~~~~~v~---~f~~g~g~v~w~~~sEifp~~~r~~~~s~~~~~n~~~~~ 445 (513)
T KOG0254|consen 398 IVFLCLFIF---SFAIGWGPVPWVIVSEIFPLRLRSKGASLAVAVNWLWNF 445 (513)
T ss_pred HHHHHHHHH---HHhcccccchhhhhhccCcHhHHhhhHHHHHHHHHHHHH
Confidence 222221222 122334444445667888999999999999999999843
No 184
>PF01770 Folate_carrier: Reduced folate carrier; InterPro: IPR002666 The reduced folate carrier (a transmembrane glycoprotein) transports reduced folate into mammalian cells via the carrier mediated mechanism (as opposed to the receptor mediated mechanism) it also transports cytotoxic folate analogues used in chemotherapy [], such as methotrexate (MTX). Mammalian cells have an absolute requirement for exogenous folates which are needed for growth, and biosynthesis of macromolecules [].; GO: 0005542 folic acid binding, 0008518 reduced folate carrier activity, 0006810 transport, 0016020 membrane
Probab=96.48 E-value=1.2 Score=47.61 Aligned_cols=111 Identities=17% Similarity=0.213 Sum_probs=63.4
Q ss_pred CchHHHHHHHHHHHHHHHhhhccceeeecccchhHHHHHHHHHHHHHHHHHHHHHHHHHhhcccccchhHHHH---HHHH
Q 011118 50 DSLLFAAIYGAVESASIALFGPIVGHWVDKLTYVKVLQIWLVTQNLSFIVAGVSVITLLFFSSLKSTNFIAFV---LLVI 126 (493)
Q Consensus 50 ~sll~~sv~gl~~~l~~llfg~~vG~~vDr~~R~~v~~~~~~~q~~~v~~s~~~~~~~l~~~~~~~~~~~~~~---~l~~ 126 (493)
+...|+..|.-+.. -.+++-+-|..+.|++++..-+.+.+. .. ++... .+...+- +.+.
T Consensus 44 ~~i~Pv~tYSyl~~------l~~vflltd~l~Ykpviil~~~~~i~t----~~----lll~~----~sv~~mq~~q~~yg 105 (412)
T PF01770_consen 44 NEIYPVWTYSYLAF------LLPVFLLTDYLRYKPVIILQALSYIIT----WL----LLLFG----TSVLAMQLMQFFYG 105 (412)
T ss_pred HhhhhHHHHHHHHH------HHHHHHHHHHhhhhHHHHHHHHHHHHH----HH----HHHHH----CcHHHHHHHHHHHH
Confidence 35667777765443 334555789999999876654332222 11 12210 1111110 1111
Q ss_pred HHHHHHHHHHhhhhhhhhhhccceEEEecCCCChhhhhhhhhHHHhHHHHHHhhhhHHHHHHHHhhh
Q 011118 127 LTNISGAVGVISTLAGTILIEREWVVVISEGHPPEALTKMNSIIRRIDLTCKLLAPAITGFIISFVS 193 (493)
Q Consensus 127 ~~~~~g~~~~l~~~a~~iaieRDWvv~i~~~~~~~~L~~~Na~mrriDl~~~l~gP~~~G~l~~~~s 193 (493)
+..-+.++.... +=..++ + ++..++-+..|..-+.++..|-+++=++++.-+
T Consensus 106 -------~~~a~evay~sY-----iys~v~--~-~~yq~vts~~raa~l~g~~~s~~lgQllvs~~~ 157 (412)
T PF01770_consen 106 -------LATAAEVAYYSY-----IYSVVD--K-EHYQKVTSYTRAATLVGRFISSLLGQLLVSFGG 157 (412)
T ss_pred -------HHHHHHHHHHHH-----heeecC--H-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcC
Confidence 112223444444 333334 3 789999999999999999999999888888543
No 185
>PRK10207 dipeptide/tripeptide permease B; Provisional
Probab=96.42 E-value=0.19 Score=54.62 Aligned_cols=137 Identities=9% Similarity=-0.024 Sum_probs=86.7
Q ss_pred HHhhhhhhHHHHHHH-HcCCCchHHHHHHHHHHHHHHHHHHHHHHHHhh-hchhhhhHHHHHHHHHHHHHHHHHHhhcch
Q 011118 307 FTVLSFGTLMTATLE-WEGIPAYIIGIARGISATIGIAATILYPILQSR-ISTLRTGLWSIWSQWFCLLICVASIWIHNS 384 (493)
Q Consensus 307 ~tVL~f~~l~~~yl~-~~gls~~~iG~~r~~~av~GllgT~~~~~l~~r-iGl~r~g~~~~~~q~~~L~~~v~~~~~~~~ 384 (493)
+..-+....+..|++ +.|+++...+...+.-....-....+++++..| +|..|+-.++.....+...++ .+.+..
T Consensus 28 ~~~y~~~~~l~~yl~~~lg~~~~~a~~i~~~~~~~~~~~~~~~G~laDr~~G~r~~~~~g~~~~~~g~~~~---~~~~~~ 104 (489)
T PRK10207 28 FGYYGVQGILAVFFVKQLGFSQEQAFITFGAFAALVYGLISIGGYVGDHLLGTKRTIVLGAIVLAIGYFMT---GMSLLK 104 (489)
T ss_pred HHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHhhHHHhhhhccchHHHHHHHHHHHHHHHHHH---HHhccc
Confidence 334455667888988 489999998888887777777777899999999 999999988886433222222 222211
Q ss_pred HHHHHHHHHHHHhhhchhhhhhhhhhhhhhccCCCC--cchhHHHHHHHHHHhh-HHHHHHHHHhccC
Q 011118 385 LVAAYMLMVGVATSRLGLWMFDLSVIQQMQDLVPES--DRCVVGGVQNSLQSTM-DLMAYTMGIIISN 449 (493)
Q Consensus 385 ~~s~~~l~~gi~~SR~GLw~fDl~~~~l~Qe~vp~~--~rG~v~gv~~sl~~~f-~l~~~~~~ii~~~ 449 (493)
. . ++..+.++..+|--.+-.+...++-|..|++ +|++..+......++. -++..+.+.+...
T Consensus 105 ~-~--ll~~~~~l~~ig~g~~~~~~~~li~~~~p~~~~~~~~~~~~~~~~~nig~~~g~~l~g~l~~~ 169 (489)
T PRK10207 105 P-D--LIFIALGTIAVGNGLFKANPASLLSKCYPPKDPRLDGAFTLFYMSINIGSLISLSLAPVIADK 169 (489)
T ss_pred h-h--HHHHHHHHHHhccccccCCHHHHHHHhcCCCchhhhcchhHHHHHHHHHHHHHHHHHHHHHHh
Confidence 1 1 1223334444555556666777888888776 4566666665555555 3444555565443
No 186
>PRK09584 tppB putative tripeptide transporter permease; Reviewed
Probab=96.36 E-value=0.33 Score=52.91 Aligned_cols=152 Identities=12% Similarity=0.005 Sum_probs=86.0
Q ss_pred ccc-chHHHHHHHHHH-HHhhhhhhHHHHHHH-HcCCCchHHHHHHHHHHHHHHHHHHHHHHHHhh-hchhhhhHHHHHH
Q 011118 292 KQE-VVLPGVSLALLF-FTVLSFGTLMTATLE-WEGIPAYIIGIARGISATIGIAATILYPILQSR-ISTLRTGLWSIWS 367 (493)
Q Consensus 292 ~q~-v~la~~alalLy-~tVL~f~~l~~~yl~-~~gls~~~iG~~r~~~av~GllgT~~~~~l~~r-iGl~r~g~~~~~~ 367 (493)
+|| .+...+...+.- +..-+....++.|+. +.|+++...+...+...........+.+++..| +|..|+..++...
T Consensus 18 ~~p~~~~~~~~~~~~~~~~~y~~~~~l~~yl~~~lg~s~~~a~~~~~~~~~~~~~~~~~~G~LaDr~~G~r~~~~~g~~~ 97 (500)
T PRK09584 18 KQPKAFYLIFSIELWERFGYYGLQGIMAVYLVKQLGMSEADSITLFSSFSALVYGLVAIGGWLGDKVLGTKRVIMLGAIV 97 (500)
T ss_pred cCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhccchHHHHHHHHHH
Confidence 454 354444443332 333445567888997 589999988877776554444445688999999 5988888777653
Q ss_pred HHHHHHHHHHHHhhcchHHHHHHHHHHHHhhhchhhhhhhhhhhhhhccCCCCc--chhHHHHHHHHHHhh-HHHHHHHH
Q 011118 368 QWFCLLICVASIWIHNSLVAAYMLMVGVATSRLGLWMFDLSVIQQMQDLVPESD--RCVVGGVQNSLQSTM-DLMAYTMG 444 (493)
Q Consensus 368 q~~~L~~~v~~~~~~~~~~s~~~l~~gi~~SR~GLw~fDl~~~~l~Qe~vp~~~--rG~v~gv~~sl~~~f-~l~~~~~~ 444 (493)
..+.. ....+.+.... .+..+.++-.+|.-.+-.+...++.+..|+++ |++..+..+...++. -++..+.+
T Consensus 98 ~~ig~---~l~~~~~~~~~---~l~~~~~l~gig~g~~~~~~~~l~~~~f~~~~~~~~~~~~~~~~~~~iG~~~gp~i~g 171 (500)
T PRK09584 98 LAIGY---ALVAWSGHDAG---IVYMGMATIAVGNGLFKANPSSLLSTCYEKDDPRLDGAFTMYYMSINIGSFFSMLATP 171 (500)
T ss_pred HHHHH---HHHHHhcccHH---HHHHHHHHHHHhhhcccCCHHHHHHHhcCCCchhhhhcchHHHHHHHHHHHHHHHHHH
Confidence 32221 11112221111 11222222223333345666778888777654 445566655555555 44556666
Q ss_pred HhccC
Q 011118 445 IIISN 449 (493)
Q Consensus 445 ii~~~ 449 (493)
.+...
T Consensus 172 ~l~~~ 176 (500)
T PRK09584 172 WLAAK 176 (500)
T ss_pred HHHHh
Confidence 66543
No 187
>KOG0255 consensus Synaptic vesicle transporter SVOP and related transporters (major facilitator superfamily) [General function prediction only]
Probab=96.35 E-value=2.1 Score=46.53 Aligned_cols=51 Identities=18% Similarity=0.078 Sum_probs=42.2
Q ss_pred HhCCCchHHHHHHHHHHHHHHHhhhccceeeecccchhHHHHHHHHHHHHH
Q 011118 46 SVWPDSLLFAAIYGAVESASIALFGPIVGHWVDKLTYVKVLQIWLVTQNLS 96 (493)
Q Consensus 46 ~l~~~sll~~sv~gl~~~l~~llfg~~vG~~vDr~~R~~v~~~~~~~q~~~ 96 (493)
..+.++...+..-+.+..+..++-+...|.+.||++||+++..+.+.+.+.
T Consensus 111 ~~~c~~~~~~~~~~s~~~~G~~vG~~i~g~lsD~~GRk~~~~~~~~~~~i~ 161 (521)
T KOG0255|consen 111 NLVCDSSTLVALGQSLFFLGVLVGSLIFGPLSDRFGRKPVLLVSLLLFIIF 161 (521)
T ss_pred ceeeCcHhHHHHHHHHHHHHHHHHHhhheehHhhcccHHHHHHHHHHHHHH
Confidence 455567777777777788888888888899999999999999998777776
No 188
>TIGR00806 rfc RFC reduced folate carrier. Proteins of the RFC family are so-far restricted to animals. RFC proteins possess 12 putative transmembrane a-helical spanners (TMSs) and evidence for a 12 TMS topology has been published for the human RFC. The RFC transporters appear to transport reduced folate by an energy-dependent, pH-dependent, Na+-independent mechanism. Folate:H+ symport, folate:OH- antiport and folate:anion antiport mechanisms have been proposed, but the energetic mechanism is not well defined.
Probab=96.32 E-value=0.11 Score=56.25 Aligned_cols=156 Identities=12% Similarity=0.071 Sum_probs=101.2
Q ss_pred HHHHHHH-HcCCCchH-HHHHHHHHHHHHHHHHHHHHHHHhhhchhhhhHHHHHHHHHHHHHHHHHHhhcchHH--HHHH
Q 011118 315 LMTATLE-WEGIPAYI-IGIARGISATIGIAATILYPILQSRISTLRTGLWSIWSQWFCLLICVASIWIHNSLV--AAYM 390 (493)
Q Consensus 315 l~~~yl~-~~gls~~~-iG~~r~~~av~GllgT~~~~~l~~riGl~r~g~~~~~~q~~~L~~~v~~~~~~~~~~--s~~~ 390 (493)
..+.|+. +.|+++.+ .|...++...+=.+.-+..+++..|+|..|.-.++.. ...+...+..+.. +.. -+.=
T Consensus 47 ~a~p~L~~elglT~~qv~G~I~s~F~ysYal~qIp~GlLaDrlG~K~vL~l~~l---~Wsl~t~L~~fa~-Sl~~L~i~R 122 (511)
T TIGR00806 47 FITPYLLTVLNFTEETVTNEIIPVLPYSHLAVLVPVFLLTDYLRYKPVLVLQAL---SFVCVWLLLLLGT-SVWHMQLME 122 (511)
T ss_pred HHHHHHHHHcCCCHHHhcchHHHHHHHHHHHHHHHHHHHHHHhCchHHHHHHHH---HHHHHHHHHHHHH-HHHHHHHHH
Confidence 3455776 79999999 9999999999999999999999999998887665553 1222222222321 111 1111
Q ss_pred HHHHHHhhhchhhhhhhhhhhhhhccCCCCcchhHHHHHHHHHHhhHHHHHHHH-H-hccCCCCchHHHHHHHHHHHHHH
Q 011118 391 LMVGVATSRLGLWMFDLSVIQQMQDLVPESDRCVVGGVQNSLQSTMDLMAYTMG-I-IISNPQDFWKLILISVIVVTLAA 468 (493)
Q Consensus 391 l~~gi~~SR~GLw~fDl~~~~l~Qe~vp~~~rG~v~gv~~sl~~~f~l~~~~~~-i-i~~~p~~F~~l~~~S~~~V~~~~ 468 (493)
++.|+. -+.+.+...++-.++|+++|+|++|.-++-..+-..+...++ + ..-.-..+..|-.+|.++++.+.
T Consensus 123 ~llGva------EA~~~A~~syI~~WfP~kER~ratsi~~sg~~vG~~Ia~~L~qll~s~gWr~y~~Ln~Isl~s~~~a~ 196 (511)
T TIGR00806 123 VFYSVT------MAARIAYSSYIFSLVPPSRYQRAAAYSRAAVLLGVFLSSVLGQLLVTLGWISYSTLNIISLVFMTFSV 196 (511)
T ss_pred HHHHHH------HHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCchhHHHHHHHHHHHHHHHH
Confidence 222222 122337888999999999999999998887776633333322 2 22245567778889999998776
Q ss_pred HHHHHHHHHhhcC
Q 011118 469 ILYTFHLYRIRKH 481 (493)
Q Consensus 469 ~l~~~~~~~~Rgh 481 (493)
.+ ..++-+..+.
T Consensus 197 ~~-a~~LP~~~~s 208 (511)
T TIGR00806 197 FL-ALFLKRPKRS 208 (511)
T ss_pred HH-HHhCCCCchh
Confidence 44 3444444333
No 189
>PRK09952 shikimate transporter; Provisional
Probab=96.31 E-value=0.37 Score=51.28 Aligned_cols=110 Identities=8% Similarity=0.016 Sum_probs=69.3
Q ss_pred CCCchHHHHHH-----HHHHHHHHHHHHHHHHHHhhhchhhhhHHHHHHHHHHHHHHHHHHhhcch----HHHHHHHHHH
Q 011118 324 GIPAYIIGIAR-----GISATIGIAATILYPILQSRISTLRTGLWSIWSQWFCLLICVASIWIHNS----LVAAYMLMVG 394 (493)
Q Consensus 324 gls~~~iG~~r-----~~~av~GllgT~~~~~l~~riGl~r~g~~~~~~q~~~L~~~v~~~~~~~~----~~s~~~l~~g 394 (493)
+.++. .|..- +++-++..+|+++++++..|+|-.|.-.++... +...+++..+.++- .++...++.+
T Consensus 56 ~~~~~-~~~~~~~~~~~~~~~~~~~g~~~~G~l~Dr~Grr~~l~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 131 (438)
T PRK09952 56 QVSPA-MGTLAAFATFGVGFLFRPLGGVVFGHFGDRLGRKRMLMLTVWM---MGIATALIGLLPSFSTIGWWAPVLLVTL 131 (438)
T ss_pred CCCcH-HHHHHHHHHHHHHHHHHhhHHHHHHHHHHhhccHHHHHHHHHH---HHHHHHHHhcCCcHHHHHHHHHHHHHHH
Confidence 66665 45543 344455568899999999999988887766652 22233333334321 1223344444
Q ss_pred HHhhhchhhhhhhhhhhhhhccCCCCcchhHHHHHHHHHHhhH
Q 011118 395 VATSRLGLWMFDLSVIQQMQDLVPESDRCVVGGVQNSLQSTMD 437 (493)
Q Consensus 395 i~~SR~GLw~fDl~~~~l~Qe~vp~~~rG~v~gv~~sl~~~f~ 437 (493)
-.+..+|.=..-.+...+..|..|+++||+..+....-..+-.
T Consensus 132 R~l~G~~~g~~~~~~~~~~~e~~p~~~rg~~~~~~~~g~~~G~ 174 (438)
T PRK09952 132 RAIQGFAVGGEWGGAALLAVESAPKNKKAFYSSGVQVGYGVGL 174 (438)
T ss_pred HHHHHhhhcccHHHHHHHHHHhCCCCCCcHHHHHHHHHHHHHH
Confidence 4555565555556777899999999999998877655444443
No 190
>PRK11128 putative 3-phenylpropionic acid transporter; Provisional
Probab=96.31 E-value=0.13 Score=53.36 Aligned_cols=46 Identities=17% Similarity=0.163 Sum_probs=41.6
Q ss_pred hhhHHHHHHHHcCCCchHHHHHHHHHHHHHHHHHHHHHHHHhhhch
Q 011118 312 FGTLMTATLEWEGIPAYIIGIARGISATIGIAATILYPILQSRIST 357 (493)
Q Consensus 312 f~~l~~~yl~~~gls~~~iG~~r~~~av~GllgT~~~~~l~~riGl 357 (493)
+...+..|+++.|.|+.++|+..++..+..+++..+.+++..|.|.
T Consensus 23 ~~p~l~~~l~~~g~s~~~iG~~~~~~~l~~~l~~~~~g~l~dr~g~ 68 (382)
T PRK11128 23 FLPFWSVWLKGQGYTPETIGLLLGAGLVARFLGSLLIAPRVKDPSQ 68 (382)
T ss_pred HhhhHHHHHHhcCCCHHHHHHHHHHHHHHHHhhhHHHHHHHhhhcc
Confidence 4556778999999999999999999999999999999999999985
No 191
>TIGR00882 2A0105 oligosaccharide:H+ symporter.
Probab=96.30 E-value=0.18 Score=52.53 Aligned_cols=56 Identities=16% Similarity=0.235 Sum_probs=48.5
Q ss_pred hhhhHHHHHHHH-cCCCchHHHHHHHHHHHHHHHHHHHHHHHHhhhchhhhhHHHHH
Q 011118 311 SFGTLMTATLEW-EGIPAYIIGIARGISATIGIAATILYPILQSRISTLRTGLWSIW 366 (493)
Q Consensus 311 ~f~~l~~~yl~~-~gls~~~iG~~r~~~av~GllgT~~~~~l~~riGl~r~g~~~~~ 366 (493)
.+...+..|+++ .|+++.++|++.++..+....+....+++..|+|..|.-.+...
T Consensus 20 ~~~~~~~~~~~~~~g~s~~~~g~~~~~~~l~~~i~~~~~G~l~Dr~grr~~~~~~~~ 76 (396)
T TIGR00882 20 AYFPFFPIWLHDVNGLSKTDTGIVFSCISLFSILFQPLFGLISDKLGLKKHLLWIIS 76 (396)
T ss_pred HHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcHHHHHHHHH
Confidence 355678888885 79999999999999999999999999999999998777665543
No 192
>PF05631 DUF791: Protein of unknown function (DUF791); InterPro: IPR008509 This family consists of several eukaryotic proteins of unknown function.
Probab=96.28 E-value=0.68 Score=48.27 Aligned_cols=77 Identities=22% Similarity=0.160 Sum_probs=60.0
Q ss_pred hhHHHHHHHHHHHHHhhHHHHH-HHHHHHHHhCCCchHHHHHHHHHHHHHHHhhhccceeeecccchhHHHHHHHHHHHH
Q 011118 17 FLTTYLYVAHFLARWGARMWEF-SVGLYMISVWPDSLLFAAIYGAVESASIALFGPIVGHWVDKLTYVKVLQIWLVTQNL 95 (493)
Q Consensus 17 ~~~~~L~~s~~lS~~Gdr~~~F-a~~L~lv~l~~~sll~~sv~gl~~~l~~llfg~~vG~~vDr~~R~~v~~~~~~~q~~ 95 (493)
|--+.+..-+.+..++|.+.-- .-.++ +-++-+--.++..-....++.+++|+++|.+.||++|||.....-+...+
T Consensus 34 ~Fqr~yl~vY~La~~aDWLQGpY~Y~LY--~~yg~~~~qIa~Lf~~Gf~Ss~i~g~~~G~laD~~Grk~~cl~~cily~~ 111 (354)
T PF05631_consen 34 RFQRKYLLVYLLAMAADWLQGPYLYALY--ESYGFSEHQIAILFVAGFASSAIFGTFVGSLADRYGRKKACLLFCILYSL 111 (354)
T ss_pred HHHHHHHHHHHHHHHHHHhhcchhHHHH--HHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCchHHHHHHHHHHHH
Confidence 3446677788899999999843 33343 45677777899999999999999999999999999999987766544433
No 193
>TIGR00898 2A0119 cation transport protein.
Probab=96.25 E-value=0.093 Score=56.45 Aligned_cols=116 Identities=11% Similarity=0.091 Sum_probs=78.9
Q ss_pred HcCCC---chHHHHHHHHHHHHHHHHHHHHHHHHhhhchhhhhHHHHHHHHHHHHHHHHHHhhcchHHHHHHHHHHHHhh
Q 011118 322 WEGIP---AYIIGIARGISATIGIAATILYPILQSRISTLRTGLWSIWSQWFCLLICVASIWIHNSLVAAYMLMVGVATS 398 (493)
Q Consensus 322 ~~gls---~~~iG~~r~~~av~GllgT~~~~~l~~riGl~r~g~~~~~~q~~~L~~~v~~~~~~~~~~s~~~l~~gi~~S 398 (493)
+.|++ +...|+..++..++.++|.++.+++..|+|-.+...++..... +.++...+.+ + ...++..-++.
T Consensus 118 e~~l~c~~~~~~~~~~s~~~~g~~~g~~~~g~l~Dr~Grr~~~~~~~~~~~---i~~~~~~~~~-~---~~~~~~~r~l~ 190 (505)
T TIGR00898 118 EWDLVCEDAWKVDLTQSCFFVGVLLGSFVFGYLSDRFGRKKVLLLSTLVTA---VSGVLTAFSP-N---YTVFLVFRLLV 190 (505)
T ss_pred EecceechHHHHHHHHHHHHHHHHHHHHhHHHhhhhccchHHHHHHHHHHH---HHHHHHHHcc-c---HHHHHHHHHHH
Confidence 56777 8899999999999999999999999999998777766554322 2222222333 2 22233333444
Q ss_pred hchhhhhhhhhhhhhhccCCCCcchhHHHHHHHHHHhhHHHHHHHH
Q 011118 399 RLGLWMFDLSVIQQMQDLVPESDRCVVGGVQNSLQSTMDLMAYTMG 444 (493)
Q Consensus 399 R~GLw~fDl~~~~l~Qe~vp~~~rG~v~gv~~sl~~~f~l~~~~~~ 444 (493)
.+|.-..-.....++.|.+|+++||++.+.......+..+.....+
T Consensus 191 G~~~~~~~~~~~~~~~e~~~~~~r~~~~~~~~~~~~~g~~~~~~~~ 236 (505)
T TIGR00898 191 GMGIGGIWVQAVVLNTEFLPKKQRAIVGTLIQVFFSLGLVLLPLVA 236 (505)
T ss_pred HhhccchHHHHHHHhheecChhhhHHHHHHHHHHHHHHHHHHHHHH
Confidence 4555566777888999999999999999887544444333333333
No 194
>TIGR01301 GPH_sucrose GPH family sucrose/H+ symporter. This model represents sucrose/proton symporters, found in plants, from the Glycoside-Pentoside-Hexuronide (GPH)/cation symporter family. These proteins are predicted to have 12 transmembrane domains. Members may export sucrose (e.g. SUT1, SUT4) from green parts to the phloem for long-distance transport or import sucrose (e.g SUT2) to sucrose sinks such as the tap root of the carrot.
Probab=96.24 E-value=0.15 Score=55.48 Aligned_cols=158 Identities=15% Similarity=0.116 Sum_probs=96.1
Q ss_pred hHHHHHHHHcCCCchHHHHHHHHHHHHHHHHHHHHHHHHh----hhchhhhhHHHHHHHHHHHHHHH-HHHhhcc-----
Q 011118 314 TLMTATLEWEGIPAYIIGIARGISATIGIAATILYPILQS----RISTLRTGLWSIWSQWFCLLICV-ASIWIHN----- 383 (493)
Q Consensus 314 ~l~~~yl~~~gls~~~iG~~r~~~av~GllgT~~~~~l~~----riGl~r~g~~~~~~q~~~L~~~v-~~~~~~~----- 383 (493)
+.++.|+.+.|+++...|....++.+.|++...+.+.+.. |+|-.|.-++... .....+. +..+.+.
T Consensus 25 ~~l~~yl~~lg~~~~~~~~i~~~~~l~~~i~~Pi~G~lSDr~~sr~GRRrp~il~g~---~~~~~~l~ll~~~~~~~~~~ 101 (477)
T TIGR01301 25 SLLTPYVQELGIPHAWASIIWLCGPLSGLLVQPLVGYLSDRCTSRFGRRRPFIAAGA---ALVAFAVILIGFAADIGHLF 101 (477)
T ss_pred HHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHhHeeehhcCCCCCCCChHHHHHHHH---HHHHHHHHHHHhCchhhhhc
Confidence 3566688899999999999999999999999999999998 5897776554322 1111111 1122221
Q ss_pred --------hHHHHHHHHHHHHhhhchhhhhhhhhhhhhhccCCCCcc--hhHHHHHHHHHHhhHHHHHHHHHhc------
Q 011118 384 --------SLVAAYMLMVGVATSRLGLWMFDLSVIQQMQDLVPESDR--CVVGGVQNSLQSTMDLMAYTMGIII------ 447 (493)
Q Consensus 384 --------~~~s~~~l~~gi~~SR~GLw~fDl~~~~l~Qe~vp~~~r--G~v~gv~~sl~~~f~l~~~~~~ii~------ 447 (493)
.......++.++.+..+..=.+......++=|.+|+++| ++.++.++...++-.++.++++-+.
T Consensus 102 ~~~~~~~~~~~~i~~~~i~~~lld~~~n~~~~p~rALiaDl~p~~~~~~~~a~~~~~~~~~lG~ilg~~~g~~~~~~~~~ 181 (477)
T TIGR01301 102 GDNLDKKTKPRAIIVFVVGFWILDVANNMLQGPCRAFLADLTGGDARRTRIANAYFSFFMAIGNVLGYAAGAYSGLYKIF 181 (477)
T ss_pred cccccccchhHHHHHHHHHHHHHHHHHHHHHHHHHHhcccccCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHhc
Confidence 011122333333322232223333444677888998865 6899988888887776666666432
Q ss_pred cC---------CCCchHHHHHHHHHHHHHHHHHHHH
Q 011118 448 SN---------PQDFWKLILISVIVVTLAAILYTFH 474 (493)
Q Consensus 448 ~~---------p~~F~~l~~~S~~~V~~~~~l~~~~ 474 (493)
+. |.+++..-.++.........+-+..
T Consensus 182 ~~~~~~~~~~~~~~~~~~F~i~a~~l~i~~l~t~~~ 217 (477)
T TIGR01301 182 PFTKTEACGVSCANLKSCFLIDIILLAILTYIALSA 217 (477)
T ss_pred ccccccccccccchHHHHHHHHHHHHHHHHHHHeee
Confidence 11 2356666666665555544444444
No 195
>TIGR02718 sider_RhtX_FptX siderophore transporter, RhtX/FptX family. RhtX from Sinorhizobium meliloti 2011 and FptX from Pseudomonas aeruginosa appear to be single polypeptide transporters, from the major facilitator family (see pfam07690) for import of siderophores as a means to import iron. This function was suggested by proximity to siderophore biosynthesis genes and then confirmed by study of knockout and heterologous expression phenotypes.
Probab=96.08 E-value=0.3 Score=50.68 Aligned_cols=148 Identities=11% Similarity=0.014 Sum_probs=79.6
Q ss_pred HHHHHHHHHHh-hh---hhhHHHHHHHHcCCCchHHHHHH--HHHHHHHHHHHHHH-HHHHhhhchhhhhHHHHHHHHHH
Q 011118 299 GVSLALLFFTV-LS---FGTLMTATLEWEGIPAYIIGIAR--GISATIGIAATILY-PILQSRISTLRTGLWSIWSQWFC 371 (493)
Q Consensus 299 ~~alalLy~tV-L~---f~~l~~~yl~~~gls~~~iG~~r--~~~av~GllgT~~~-~~l~~riGl~r~g~~~~~~q~~~ 371 (493)
.+.++.+|++- +. ....+..|++++|+++.++|++- ++..+..++.+-+- ++..+|+|..|.-++. .|...
T Consensus 3 ~~~~~~ly~~~g~~~~~~~p~lp~~l~~~g~~~~~iGl~~~~~l~~~~~~l~~p~~~~~~~~~~g~r~~~i~~--~~~~~ 80 (390)
T TIGR02718 3 VITLGLLYLSQGIPIGLAMDALPTLLREDGAPLTALAFLPLVGLPWVVKFLWAPLVDNWWSWRLGRRRSWVLP--MQCLV 80 (390)
T ss_pred HHHHHHHHHHHHhHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHhccccccCCcchhHHHH--HHHHH
Confidence 45667888753 33 33577889999999999999983 44455554444333 3345567766663222 23221
Q ss_pred H-HHHHHHHhhcchHHHHHHHHHHHHhhhchhhhhhhhhhhhhhccCCCCcchhHHHHHHHHHH-hhHHHHHHHHHhccC
Q 011118 372 L-LICVASIWIHNSLVAAYMLMVGVATSRLGLWMFDLSVIQQMQDLVPESDRCVVGGVQNSLQS-TMDLMAYTMGIIISN 449 (493)
Q Consensus 372 L-~~~v~~~~~~~~~~s~~~l~~gi~~SR~GLw~fDl~~~~l~Qe~vp~~~rG~v~gv~~sl~~-~f~l~~~~~~ii~~~ 449 (493)
. .......+.+.... ...++....+.-+.--..|.....+.-|..++++++..++.+..-.. ++-++..+.+.+.+.
T Consensus 81 ~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~a~~d~~~d~~~~~~~~~~~~~~~~~~~~~g~~lG~~~g~~~~~~l~~~ 159 (390)
T TIGR02718 81 SACLASLALVGPDVAG-AGWAVGLLACASLASATQDIATDGMAAEHFNGRTLAKGNAVQIAGVMIGFFGGGAGTLVLFGK 159 (390)
T ss_pred HHHHHHHHcCCcchhh-HHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCHhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 1 11111111111111 11112222333344455688777777777788888887777765423 335555555555543
No 196
>PF11700 ATG22: Vacuole effluxer Atg22 like; InterPro: IPR024671 Autophagy is a major survival mechanism in which eukaryotes recycle cellular nutrients during stress conditions. Atg22, Avt3 and Avt4 are partially redundant vacuolar effluxers, which mediate the efflux of leucine and other amino acids resulting from autophagy []. This family also includes other transporter proteins.
Probab=96.05 E-value=0.41 Score=52.11 Aligned_cols=181 Identities=16% Similarity=0.144 Sum_probs=112.4
Q ss_pred hhHHHHHHHHHHHHHhhHHHHHHHHHHHHHhCCCchHHHHHHHHHHHHHHHhhhccceeeecccchh--HHHHHHHHHHH
Q 011118 17 FLTTYLYVAHFLARWGARMWEFSVGLYMISVWPDSLLFAAIYGAVESASIALFGPIVGHWVDKLTYV--KVLQIWLVTQN 94 (493)
Q Consensus 17 ~~~~~L~~s~~lS~~Gdr~~~Fa~~L~lv~l~~~sll~~sv~gl~~~l~~llfg~~vG~~vDr~~R~--~v~~~~~~~q~ 94 (493)
|+..++.++.++-.=|-..---...++....+.=|.....+++++..+..++.+...|.+-||.+-| +++..+++.=.
T Consensus 281 ~~~~~fLia~~l~~dg~~ti~~~~~i~a~~~lg~s~~~l~~~~l~~~i~a~~Ga~~~g~l~~r~g~k~~~~l~~~l~~~~ 360 (477)
T PF11700_consen 281 RQLFLFLIAYFLYSDGVNTIISFAGIYATEVLGMSTTQLIVFGLVVQIVAIIGALLFGWLQDRFGPKTKRTLLISLILWI 360 (477)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCchhHHHHHHHHHHH
Confidence 4556677777776656555555556667777888889999999999999999999999888888655 66666553221
Q ss_pred HHHHHHHHHHHHHH--hhccc-ccchhHHHHHHHHHHHHHHHHHHhhhhhhhhhhccceEEEecCCCChhhhhhhhhHHH
Q 011118 95 LSFIVAGVSVITLL--FFSSL-KSTNFIAFVLLVILTNISGAVGVISTLAGTILIEREWVVVISEGHPPEALTKMNSIIR 171 (493)
Q Consensus 95 ~~v~~s~~~~~~~l--~~~~~-~~~~~~~~~~l~~~~~~~g~~~~l~~~a~~iaieRDWvv~i~~~~~~~~L~~~Na~mr 171 (493)
+. +. +.++ .+... ....|..+..-++..+..|.....+- -....+..+ ++-.+.-+...
T Consensus 361 ~i----~~--~g~~G~~~~~~g~~~~~~f~~~a~~~G~~~G~~qs~sR---------s~~~~LiP~---g~e~efFgly~ 422 (477)
T PF11700_consen 361 II----PL--YGLFGFWPSFFGLKSPWEFWVLAVLIGLFMGGIQSASR---------SLFSRLIPP---GREAEFFGLYA 422 (477)
T ss_pred HH----HH--HHHHHhhhcccCcccHHHHHHHHHHHHHHhhhHHHHHH---------HHHHHhCCC---chhhHHHHHHH
Confidence 11 11 1111 11111 11122222221212223333333333 234455555 45689999999
Q ss_pred hHHHHHHhhhhHHHHHHHHhhh-hHHHHHHHHHHHHHHHHHHHHHHHHH
Q 011118 172 RIDLTCKLLAPAITGFIISFVS-LQASAMTLAIWTTVTVWVEYWLFMSV 219 (493)
Q Consensus 172 riDl~~~l~gP~~~G~l~~~~s-~~~a~~~i~~~n~~S~~ve~~~l~~V 219 (493)
-.|..+..+||++.|.+.+..| .+.+...+.+ =+++-..++.+|
T Consensus 423 i~gk~ss~lGPll~g~i~~~tg~~r~g~~~l~~----lf~~gl~ll~~v 467 (477)
T PF11700_consen 423 ITGKASSWLGPLLFGLITDATGSQRYGFLFLLV----LFLIGLILLFFV 467 (477)
T ss_pred HHHHHHHHHHHHHHHHHHHHhCCchhHHHHHHH----HHHHHHHHHhhc
Confidence 9999999999999999999886 7777744444 344444555544
No 197
>PRK15075 citrate-proton symporter; Provisional
Probab=96.03 E-value=0.43 Score=50.52 Aligned_cols=122 Identities=9% Similarity=-0.004 Sum_probs=73.8
Q ss_pred hhhhHHHHHHHHcCCCchHHHHHH------HHHHHHHHHHHHHHHHHHhhhchhhhhHHHHHHHHHHHHHHHHHHhhcch
Q 011118 311 SFGTLMTATLEWEGIPAYIIGIAR------GISATIGIAATILYPILQSRISTLRTGLWSIWSQWFCLLICVASIWIHNS 384 (493)
Q Consensus 311 ~f~~l~~~yl~~~gls~~~iG~~r------~~~av~GllgT~~~~~l~~riGl~r~g~~~~~~q~~~L~~~v~~~~~~~~ 384 (493)
.++...+...++.|.++...+... +.+.+...+|+++.+++.+|+|-.|.-.++... +....+...+.+ +
T Consensus 33 ~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ig~~~~G~l~Dr~Grr~~l~~~~~~---~~~~~~l~~~~~-~ 108 (434)
T PRK15075 33 LFGFYATAIAKTFFPAGNEFASLMLTFAVFGAGFLMRPLGAIVLGAYIDRVGRRKGLIVTLSI---MASGTLLIAFVP-G 108 (434)
T ss_pred HHHHHHHHHHHHhCCCCCchHHHHHHHHHHHHHHHHhhhHHHHHHHHhhhhchHHHHHHHHHH---HHHHHHHHHhCC-c
Confidence 344444444446888887765443 222333346889999999999988887766652 222222223333 2
Q ss_pred HHH-----HHHHHHHHHhhhchhhhhhhhhhhhhhccCCCCcchhHHHHHHHHHHhh
Q 011118 385 LVA-----AYMLMVGVATSRLGLWMFDLSVIQQMQDLVPESDRCVVGGVQNSLQSTM 436 (493)
Q Consensus 385 ~~s-----~~~l~~gi~~SR~GLw~fDl~~~~l~Qe~vp~~~rG~v~gv~~sl~~~f 436 (493)
... ...++.+-++..+|.-..-.+...++-|..|+++||+..+......+..
T Consensus 109 ~~~~~~~~~~~l~~~R~l~G~~~g~~~~~~~~~~~e~~p~~~rg~~~~~~~~~~~~g 165 (434)
T PRK15075 109 YATIGLAAPLLVLLGRLLQGFSAGVELGGVSVYLAEIATPGRKGFYTSWQSASQQVA 165 (434)
T ss_pred HHHHHHHHHHHHHHHHHHhhccccccHHHHHHHHHhhCCcccchHHHHHHHHHHHHH
Confidence 111 1123444444445443334556678999999999999999988877655
No 198
>PF13347 MFS_2: MFS/sugar transport protein
Probab=95.91 E-value=0.064 Score=56.74 Aligned_cols=79 Identities=18% Similarity=0.149 Sum_probs=68.3
Q ss_pred hhHHHHHHHHHHHHHhhHHHHHHHHHHHHHhCCCchHHHHHHHHHHHHHHHhhhccceeeecccchhHHHHHHHHHHHHH
Q 011118 17 FLTTYLYVAHFLARWGARMWEFSVGLYMISVWPDSLLFAAIYGAVESASIALFGPIVGHWVDKLTYVKVLQIWLVTQNLS 96 (493)
Q Consensus 17 ~~~~~L~~s~~lS~~Gdr~~~Fa~~L~lv~l~~~sll~~sv~gl~~~l~~llfg~~vG~~vDr~~R~~v~~~~~~~q~~~ 96 (493)
|.++.++..+++...+..+..-..+.+..+...+. -..+.+.....++.++..+..+...||.+|||++..+.+...+.
T Consensus 225 r~~~~l~~~~~~~~~~~~~~~~~~~y~~~~vl~~~-~~~~~~~~~~~~~~~v~~~~~~~l~~r~gk~~~~~~~~~~~~~~ 303 (428)
T PF13347_consen 225 RPFRILLLAFFLQWLAFALMNTFLPYYFTYVLGNE-GLISIFMLIFFVASIVGSPLWGRLSKRFGKKKVYIIGLLLAALG 303 (428)
T ss_pred chHHHHHHHHHHHHhhhhhhhhHHHHHHHHHhcCc-hhhHHHHHHHHHHHHHHHHHHHHHHHHccceeehhhhHHHHHHH
Confidence 67899999999999999998888888888888877 56688888899999999999999999999999998887554443
No 199
>PRK06814 acylglycerophosphoethanolamine acyltransferase; Provisional
Probab=95.79 E-value=0.36 Score=57.65 Aligned_cols=118 Identities=7% Similarity=-0.006 Sum_probs=82.3
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHhhhchhhhhHHHHHHHHHHHHHHHHHHhhcchHHHHHHHHHHHHhhhchhhhhhh
Q 011118 328 YIIGIARGISATIGIAATILYPILQSRISTLRTGLWSIWSQWFCLLICVASIWIHNSLVAAYMLMVGVATSRLGLWMFDL 407 (493)
Q Consensus 328 ~~iG~~r~~~av~GllgT~~~~~l~~riGl~r~g~~~~~~q~~~L~~~v~~~~~~~~~~s~~~l~~gi~~SR~GLw~fDl 407 (493)
..+|+..++..+..++.+.+++++..|+|..|...+.......+...+...++.+ +...++.+-++..+|--.+..
T Consensus 52 ~~~~l~~~~~~l~~~l~~~~~G~laDr~~rk~~~~~~~~~~~~~~~~~~~~~~~~----s~~~l~~~~~l~gi~~a~~~p 127 (1140)
T PRK06814 52 ALVTLAGAVFILPFFIFSALAGQLADKYDKAKLAKILKFAEIGIAALAIYGFHLN----SVPLLFAALFLMGIHSALFGP 127 (1140)
T ss_pred HHHHHHHHHHHHHHHHHhhhHHhhhhhccHHHHHHHHHHHHHHHHHHHHHHHHHh----hHHHHHHHHHHHHHHHHhhch
Confidence 5678888888899999999999999999987754333332222332222222222 233444455555566667789
Q ss_pred hhhhhhhccCCCCcchhHHHHHHHHHHhh-HHHHHHHHHhccC
Q 011118 408 SVIQQMQDLVPESDRCVVGGVQNSLQSTM-DLMAYTMGIIISN 449 (493)
Q Consensus 408 ~~~~l~Qe~vp~~~rG~v~gv~~sl~~~f-~l~~~~~~ii~~~ 449 (493)
+...++-+.+|+++|++.+|...+..++. -++..+.+++...
T Consensus 128 ~~~a~l~~~~~~~~~~~a~~~~~~~~~ig~~igp~l~g~l~~~ 170 (1140)
T PRK06814 128 IKYSILPDHLNKDELLGANALVEAGTFIAILLGTIIGGLATIS 170 (1140)
T ss_pred HHHHhhHhhcCccccchhhHHHHHHHHHHHHHHHHHHHHHHhc
Confidence 99999999999999999999998888888 4556666666553
No 200
>PRK10642 proline/glycine betaine transporter; Provisional
Probab=95.75 E-value=1.1 Score=48.38 Aligned_cols=98 Identities=9% Similarity=0.021 Sum_probs=64.9
Q ss_pred HHHHHHHHHHHHHHHHHHHhhhchhhhhHHHHHHHHHHHHHHHHHHhhcch----HHHHHHHHHHHHhhhchhhhhhhhh
Q 011118 334 RGISATIGIAATILYPILQSRISTLRTGLWSIWSQWFCLLICVASIWIHNS----LVAAYMLMVGVATSRLGLWMFDLSV 409 (493)
Q Consensus 334 r~~~av~GllgT~~~~~l~~riGl~r~g~~~~~~q~~~L~~~v~~~~~~~~----~~s~~~l~~gi~~SR~GLw~fDl~~ 409 (493)
.+++-++-.+|.++++++..|+|-.|+..+++..- ....++..+.++- .++..+++.+-++..+|.=..-.+.
T Consensus 63 ~~~~~l~~~ig~~~~G~l~Dr~Grr~~l~~~~~l~---~i~~~~~a~~~~~~~~g~~a~~~l~~~R~l~G~g~g~~~~~~ 139 (490)
T PRK10642 63 FSVPFLIRPLGGLFFGMLGDKYGRQKILAITIVIM---SISTFCIGLIPSYATIGIWAPILLLLCKMAQGFSVGGEYTGA 139 (490)
T ss_pred HHHHHHHHHHHHHHHHHHHHhcccHHHHHHHHHHH---HHHHHHHHhcccHHHHHHHHHHHHHHHHHHHHhHhHhhHHHH
Confidence 35556777799999999999999999888777632 2222222233321 1222334444445555555556778
Q ss_pred hhhhhccCCCCcchhHHHHHHHHHH
Q 011118 410 IQQMQDLVPESDRCVVGGVQNSLQS 434 (493)
Q Consensus 410 ~~l~Qe~vp~~~rG~v~gv~~sl~~ 434 (493)
..++.|..|+++||+..+....-..
T Consensus 140 ~~~~~e~~p~~~Rg~~~~~~~~~~~ 164 (490)
T PRK10642 140 SIFVAEYSPDRKRGFMGSWLDFGSI 164 (490)
T ss_pred HHHHHHhCCCCCCcHHHHHHHHHHH
Confidence 8899999999999999887654443
No 201
>TIGR00902 2A0127 phenyl proprionate permease family protein. This family of proteins is involved in the uptake of 3-phenylpropionic acid. This uptake mechanism is for the metabolism of phenylpropanoid compounds and plays an important role in the natural degradative cycle of these aromatic molecules.
Probab=95.62 E-value=0.63 Score=48.31 Aligned_cols=46 Identities=20% Similarity=0.267 Sum_probs=41.3
Q ss_pred hhhHHHHHHHHcCCCchHHHHHHHHHHHHHHHHHHHHHHHHhhhch
Q 011118 312 FGTLMTATLEWEGIPAYIIGIARGISATIGIAATILYPILQSRIST 357 (493)
Q Consensus 312 f~~l~~~yl~~~gls~~~iG~~r~~~av~GllgT~~~~~l~~riGl 357 (493)
+.+.+..|+++.|+++.++|+..++..+...++..+.+++..|.|-
T Consensus 23 ~~p~l~~~l~~~g~s~~~ig~~~s~~~~~~~~~~~~~g~l~d~~~~ 68 (382)
T TIGR00902 23 FLPFFPAWLKGIGLGEEMIGLLIGAALIARFAGGLFFAPLIKDANH 68 (382)
T ss_pred HHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCc
Confidence 4556779999999999999999999999999999999999999883
No 202
>KOG0254 consensus Predicted transporter (major facilitator superfamily) [General function prediction only]
Probab=95.47 E-value=0.28 Score=53.46 Aligned_cols=137 Identities=18% Similarity=0.123 Sum_probs=101.9
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhhhchhhhhHHHHHHHHHHHHHHHHHHhhcchHHHHHHHHHHHHhhhchhhhhhhh
Q 011118 329 IIGIARGISATIGIAATILYPILQSRISTLRTGLWSIWSQWFCLLICVASIWIHNSLVAAYMLMVGVATSRLGLWMFDLS 408 (493)
Q Consensus 329 ~iG~~r~~~av~GllgT~~~~~l~~riGl~r~g~~~~~~q~~~L~~~v~~~~~~~~~~s~~~l~~gi~~SR~GLw~fDl~ 408 (493)
..+++-+.-.+++.+|.++++++..++|-.++.+.+.. .+.+..+...+++ +...+..|=++..+|.-.....
T Consensus 90 ~~s~~~s~~~lga~~g~l~~g~l~d~~GRk~~l~~~~~---~~~iG~ii~~~a~----~~~~l~~GR~l~G~g~G~~~~~ 162 (513)
T KOG0254|consen 90 RQGLLTSILNLGALVGSLLAGRLGDRIGRKKTLLLAVV---LFLIGAIIIALAP----SWYQLIVGRILTGLGVGGASVL 162 (513)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHH---HHHHHHHHHHHhh----hHHHHHHHHHHhccchhhhhhc
Confidence 45899999999999999999999999998888876665 3444444434333 6777888888899999999988
Q ss_pred hhhhhhccCCCCcchhHHHHHHHHHHhhHHHHHHHHHhccCC--CCchHHHHHHHHHHHHHHHHHH
Q 011118 409 VIQQMQDLVPESDRCVVGGVQNSLQSTMDLMAYTMGIIISNP--QDFWKLILISVIVVTLAAILYT 472 (493)
Q Consensus 409 ~~~l~Qe~vp~~~rG~v~gv~~sl~~~f~l~~~~~~ii~~~p--~~F~~l~~~S~~~V~~~~~l~~ 472 (493)
+.-+.=|..|++.||...+...-...+--+..|+.+...+.. +=+-.+.+..+.++.....++.
T Consensus 163 ~piy~sEiap~~~RG~l~~~~~l~~~~Gi~~~~~~~~~~~~~~~~Wr~~~~~~~i~~~~~~~~~~~ 228 (513)
T KOG0254|consen 163 APVYISEIAPAHIRGTLVSLYQLFITIGILLGYCINYGTSKVYAGWRIPLGLALIPAVILALGMLF 228 (513)
T ss_pred chhhHhhcCChhhhHHHHHHHHHHHHHHHHHHHHHhhhhccCCccHHHHHHHHHHHHHHHHHHHHh
Confidence 888888888999999999977776666677778888887764 2223334444445554444444
No 203
>COG2814 AraJ Arabinose efflux permease [Carbohydrate transport and metabolism]
Probab=95.47 E-value=1.1 Score=47.48 Aligned_cols=161 Identities=17% Similarity=0.106 Sum_probs=102.3
Q ss_pred ccchHHHHHHHHHHH---Hh-hhhhhHHHHHHHHcCCCchHHHHHHHHHHHHHHHHHHHHHHHHhhhchhhhhHHHHHHH
Q 011118 293 QEVVLPGVSLALLFF---TV-LSFGTLMTATLEWEGIPAYIIGIARGISATIGIAATILYPILQSRISTLRTGLWSIWSQ 368 (493)
Q Consensus 293 q~v~la~~alalLy~---tV-L~f~~l~~~yl~~~gls~~~iG~~r~~~av~GllgT~~~~~l~~riGl~r~g~~~~~~q 368 (493)
++...+.+++++--| |. +-..++++.-..+.|+|+...|.+-++-|.+..+++.....+.+|+.-.|.-++...
T Consensus 9 ~~~~~~l~aLa~~~F~igttEfv~~gLLp~iA~dl~vs~~~aG~lis~yAl~~ai~ap~l~~lt~r~~Rr~lLl~~l~-- 86 (394)
T COG2814 9 KPMWLALLALALAAFAIGTTEFVPVGLLPPIAADLGVSEGAAGQLITAYALGVALGAPLLALLTGRLERRRLLLGLLA-- 86 (394)
T ss_pred ccchHHHHHHHHHHHHHHhHHHHHHhchHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHcccchHHHHHHHHH--
Confidence 344445555553333 22 457788888888999999999999999999999999999999999996666554443
Q ss_pred HHHHHHHHHHHhhcchHHHHHHHHHHHHhhhchhhhhhhhhhhhhhccCCCCcchhHHHHHHH---HHHhh--HHHHHHH
Q 011118 369 WFCLLICVASIWIHNSLVAAYMLMVGVATSRLGLWMFDLSVIQQMQDLVPESDRCVVGGVQNS---LQSTM--DLMAYTM 443 (493)
Q Consensus 369 ~~~L~~~v~~~~~~~~~~s~~~l~~gi~~SR~GLw~fDl~~~~l~Qe~vp~~~rG~v~gv~~s---l~~~f--~l~~~~~ 443 (493)
+|....+++.+.| +..+++.+=+++.+.+=.|=-....+-=+.||+++|+|.-|+..+ +.... |++.++.
T Consensus 87 -lFi~~n~l~alAp----~f~~Ll~aR~~~g~a~G~f~~i~~~~a~~lvpp~~~~~Aiaiv~~G~tlA~v~GvPLGt~ig 161 (394)
T COG2814 87 -LFIVSNLLSALAP----SFAVLLLARALAGLAHGVFWSIAAALAARLVPPGKRGRALALVFTGLTLATVLGVPLGTFLG 161 (394)
T ss_pred -HHHHHHHHHHHhc----cHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCccchhhHHHHHHHHHHHHHHHhccHHHHHH
Confidence 3333334434343 223333333333333334445555666688999999998886653 33333 8888887
Q ss_pred HHhccCCCCchHHHHHHH
Q 011118 444 GIIISNPQDFWKLILISV 461 (493)
Q Consensus 444 ~ii~~~p~~F~~l~~~S~ 461 (493)
..+ .+-..|.....+++
T Consensus 162 ~~~-GWR~~F~~ia~l~l 178 (394)
T COG2814 162 QLF-GWRATFLAIAVLAL 178 (394)
T ss_pred HHh-hHHHHHHHHHHHHH
Confidence 766 23334444443333
No 204
>PF01306 LacY_symp: LacY proton/sugar symporter; InterPro: IPR022814 In bacteria there are a number of families of transport proteins, including symporters and antiporters, that mediate the intake of a variety of sugars with the concomitant uptake of hydrogen ions (proton symporters) []. The lacY family of Escherichia coli and Klebsiella pneumoniae are proton/beta-galactoside symporters, which, like most sugar transporters, are integral membrane proteins with 12 predicted transmembrane (TM) regions. Also similar to the lacY family are the rafinose (rafB) and sucrose (cscB) permeases from E. coli []. This entry also includes bacterial phenylproprionate permease.; PDB: 1PV7_B 1PV6_A 2Y5Y_B 2CFQ_A 2V8N_B 2CFP_A.
Probab=95.38 E-value=0.16 Score=54.06 Aligned_cols=76 Identities=17% Similarity=0.247 Sum_probs=56.2
Q ss_pred ecccchHHHHHHHHHHHHhh-hhhhHHHHHHHH-cCCCchHHHHHHHHHHHHHHHHHHHHHHHHhhhchhhhhHHHHH
Q 011118 291 LKQEVVLPGVSLALLFFTVL-SFGTLMTATLEW-EGIPAYIIGIARGISATIGIAATILYPILQSRISTLRTGLWSIW 366 (493)
Q Consensus 291 ~~q~v~la~~alalLy~tVL-~f~~l~~~yl~~-~gls~~~iG~~r~~~av~GllgT~~~~~l~~riGl~r~g~~~~~ 366 (493)
.+++.+.-.-..-++||... .+-+....|+.+ .|+++.++|+..+++++..++.-.+++.+..|+|..|.-++.+.
T Consensus 4 ~~~~~~~~~s~~~f~~Ff~~gi~~pF~~iWL~~~~GLs~~~iG~i~s~~~~~~l~~qp~~G~i~Dklg~kK~Ll~~i~ 81 (412)
T PF01306_consen 4 FKNKNYWWLSLFYFFYFFIWGIFLPFFPIWLTQVAGLSGTEIGIIFSAGSLFALLAQPVYGFISDKLGLKKHLLWFIA 81 (412)
T ss_dssp CHSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH---HHHHHHHHHHHHHHHHHTHHHHHHHHHHCTTCSHHHHHHH
T ss_pred ccCchHHHHHHHHHHHHHHHHHHHHHHHHHHccccCCCHHHHHHHHHHHHHHHHHHHHhHHHhcchhhhhHHHHHHHH
Confidence 44544443333344454443 366678889985 99999999999999999999999999999999999998887665
No 205
>KOG2532 consensus Permease of the major facilitator superfamily [Carbohydrate transport and metabolism]
Probab=95.01 E-value=0.37 Score=52.31 Aligned_cols=129 Identities=12% Similarity=0.019 Sum_probs=85.4
Q ss_pred HcCCCchHHHHHHHHHHHHHHHHHHHHHHHHhhhchhhhhHHHHHHHHHHHHHHHHHHhhcchHHHHHHHHHHHHhhhch
Q 011118 322 WEGIPAYIIGIARGISATIGIAATILYPILQSRISTLRTGLWSIWSQWFCLLICVASIWIHNSLVAAYMLMVGVATSRLG 401 (493)
Q Consensus 322 ~~gls~~~iG~~r~~~av~GllgT~~~~~l~~riGl~r~g~~~~~~q~~~L~~~v~~~~~~~~~~s~~~l~~gi~~SR~G 401 (493)
+-..++.+-|.+.+.-+.|.+++.+-.+++.+|+|..|.-.++.. +......+.++... .+...++..=++-.++
T Consensus 67 ~~~ws~~~k~~i~ss~~~G~i~~~iP~g~l~~k~G~r~v~~~~~~---~sa~~t~l~P~aa~--~~~~~~~~~R~lqGl~ 141 (466)
T KOG2532|consen 67 EYDWSSTEKGLIFSSFFWGYILGQIPGGYLADKFGARRVFFISGL---ISALLTLLTPLAAS--IGFYLLLVLRFLQGLG 141 (466)
T ss_pred eecCCHHHHHHHHHHHHHHHHHHHcCcHHHHHHcCchHHHHHHHH---HHHHHHHHHHHHHH--hcchhhHHHHHHhHHH
Confidence 356688999999999999999999999999999999887665554 22223333333210 1111112222222233
Q ss_pred hhhhhhhhhhhhhccCCCCcchhHHHHHHHHHHhhHHHHH-HHHHhccCCCCchHHH
Q 011118 402 LWMFDLSVIQQMQDLVPESDRCVVGGVQNSLQSTMDLMAY-TMGIIISNPQDFWKLI 457 (493)
Q Consensus 402 Lw~fDl~~~~l~Qe~vp~~~rG~v~gv~~sl~~~f~l~~~-~~~ii~~~p~~F~~l~ 457 (493)
--.-=.+...+..++.|++||++..++-.+-.++..+..+ +.|.+... ++||..
T Consensus 142 ~g~~~pa~~~i~~~W~P~~Ers~~~ail~~g~q~g~v~~mp~sg~lc~s--~~GW~s 196 (466)
T KOG2532|consen 142 QGVLFPAIGSILAKWAPPNERSTFIAILTAGSQLGTIITMPVSGLLCES--SLGWPS 196 (466)
T ss_pred HhHHHhhhhceeeeECCHHHHHHHHHHHHHHHHHHHHHHHHhHHHHhcc--CCCCch
Confidence 3333467788899999999999999999998877755555 66665544 444444
No 206
>KOG0569 consensus Permease of the major facilitator superfamily [Carbohydrate transport and metabolism]
Probab=94.99 E-value=0.84 Score=49.75 Aligned_cols=128 Identities=16% Similarity=0.102 Sum_probs=72.9
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhhhchhhhhHHHHHHHHHHHHHHHHHHhhcchHHHHHHHHHHHHhhhchhhhhhhhhh
Q 011118 331 GIARGISATIGIAATILYPILQSRISTLRTGLWSIWSQWFCLLICVASIWIHNSLVAAYMLMVGVATSRLGLWMFDLSVI 410 (493)
Q Consensus 331 G~~r~~~av~GllgT~~~~~l~~riGl~r~g~~~~~~q~~~L~~~v~~~~~~~~~~s~~~l~~gi~~SR~GLw~fDl~~~ 410 (493)
+..-+.-.+||+.|+++.+++..|+|-..+-..+... ....++...+.. ...+.-++..|-.+..+..=..+-.+.
T Consensus 63 S~~vs~f~iG~~~Gs~~~~~la~~~GRK~~l~~~~~l---~~~~~~~~~~s~-~~~~~e~li~GR~i~Gl~~gl~~~~~p 138 (485)
T KOG0569|consen 63 SLIVSIFFIGGMIGSFSSGLLADRFGRKNALLLSNLL---AVLAALLMGLSK-SAPSFEMLILGRLIVGLACGLSTGLVP 138 (485)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhcchHHHHHHHHH---HHHHHHHHHHHH-HhhhHHHHHHHHHHHHHHhHHHHHHHH
Confidence 3444555679999999999999999966554444432 222222222221 111223333443333333333466777
Q ss_pred hhhhccCCCCcchhHHHHHHHHHHhhHHHHHHHH--HhccCCCCchHHHHHHHH
Q 011118 411 QQMQDLVPESDRCVVGGVQNSLQSTMDLMAYTMG--IIISNPQDFWKLILISVI 462 (493)
Q Consensus 411 ~l~Qe~vp~~~rG~v~gv~~sl~~~f~l~~~~~~--ii~~~p~~F~~l~~~S~~ 462 (493)
-++||.-|++.||.++......-.+..+++.+++ -++.+++.-+++-..+..
T Consensus 139 myl~E~sP~~~RG~~g~~~~~~~~~g~ll~~~~~l~~ilGt~~~W~~l~~~~~i 192 (485)
T KOG0569|consen 139 MYLTEISPKNLRGALGTLLQIGVVIGILLGQVLGLPSLLGTEDLWPYLLAFPLI 192 (485)
T ss_pred HHHhhcChhhhccHHHHHHHHHHHHHHHHHHHHccHHhcCCCcchHHHHHHHHH
Confidence 7899999999999988766655555555554444 233444444444444443
No 207
>PRK09848 glucuronide transporter; Provisional
Probab=94.89 E-value=0.9 Score=48.24 Aligned_cols=160 Identities=13% Similarity=0.011 Sum_probs=90.1
Q ss_pred hhHHHHHHHHHHHHHhhHHHHHHHHHHHHHhCCCchHHHHHHHHHHHHHHHhhhccceeeecccchhHHHHHHHHHHHHH
Q 011118 17 FLTTYLYVAHFLARWGARMWEFSVGLYMISVWPDSLLFAAIYGAVESASIALFGPIVGHWVDKLTYVKVLQIWLVTQNLS 96 (493)
Q Consensus 17 ~~~~~L~~s~~lS~~Gdr~~~Fa~~L~lv~l~~~sll~~sv~gl~~~l~~llfg~~vG~~vDr~~R~~v~~~~~~~q~~~ 96 (493)
|.+..+....++...+--.+....|.++.+.+..+....+++.....+..++.++..|++.||.++++++..+.+...+.
T Consensus 228 ~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~l~~~l~~r~g~~~~~~~g~~~~~i~ 307 (448)
T PRK09848 228 RPLFMLCIGALCVLISTFAVSASSLFYVRYVLNDTGLFTVLVLVQNLVGTVASAPLVPGMVARIGKKNTFLIGALLGTCG 307 (448)
T ss_pred chHHHHHHHHHHHHHHHHHHhhhheeeEeeecCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcHHHHHHHHHHHHHH
Confidence 45666777777777776677666777777777666554444444345667778899999999999999988776433222
Q ss_pred HHHHHHHHHHHHhhcccccchhHHHHHHHHHHHHHHHHHHhhhhhhhhhhccceEEEecCCCC----hhhhhhhhhHHHh
Q 011118 97 FIVAGVSVITLLFFSSLKSTNFIAFVLLVILTNISGAVGVISTLAGTILIEREWVVVISEGHP----PEALTKMNSIIRR 172 (493)
Q Consensus 97 v~~s~~~~~~~l~~~~~~~~~~~~~~~l~~~~~~~g~~~~l~~~a~~iaieRDWvv~i~~~~~----~~~L~~~Na~mrr 172 (493)
+.. +. +.+ ....|..+..++ +.+....+..+. ..+. +...++.|+ .++-...++...-
T Consensus 308 ----~~~-~~-~~~---~~~~~~~~~~~~----l~g~G~~~~~~~-~~al----~~~~~~~~~~~~g~r~~G~~~~~~~~ 369 (448)
T PRK09848 308 ----YLL-FF-WVS---VWSLPVALVALA----IASIGQGVTMTV-MWAL----EADTVEYGEYLTGVRIEGLTYSLFSF 369 (448)
T ss_pred ----HHH-HH-HcC---chhHHHHHHHHH----HHHHHHHHHHHH-HHHH----HHHhhhhhHHhhCccchhHHHHHHHH
Confidence 221 11 111 111122211111 122222222222 1111 111112110 0123556777777
Q ss_pred HHHHHHhhhhHHHHHHHHhhhh
Q 011118 173 IDLTCKLLAPAITGFIISFVSL 194 (493)
Q Consensus 173 iDl~~~l~gP~~~G~l~~~~s~ 194 (493)
.+.++..+||.+.|.+++..|+
T Consensus 370 ~~klg~aig~~i~g~~l~~~G~ 391 (448)
T PRK09848 370 TRKCGQAIGGSIPAFILGLSGY 391 (448)
T ss_pred HHHHHHHHHHHHHHHHHHHcCC
Confidence 8889999999999999887664
No 208
>TIGR00805 oat sodium-independent organic anion transporter. Proteins of the OAT family catalyze the Na+-independent facilitated transport of organic anions such as bromosulfobromophthalein and prostaglandins as well as conjugated and unconjugated bile acids (taurocholate and cholate, respectively). These transporters have been characterized in mammals, but homologues are present in C. elegans and A. thaliana. Some of the mammalian proteins exhibit a high degree of tissue specificity. For example, the rat OAT is found at high levels in liver and kidney and at lower levels in other tissues. These proteins possess 10-12 putative a-helical transmembrane spanners. They may catalyze electrogenic anion uniport or anion exchange.
Probab=94.65 E-value=0.3 Score=54.95 Aligned_cols=135 Identities=10% Similarity=0.046 Sum_probs=95.1
Q ss_pred hhhhh-HHHHHHHHcCCCchHHHHHHHHHHHHHHHHHHHHHHHHhhhchhhhhHHHHHHHHH-HHHHHHHHHhhcc----
Q 011118 310 LSFGT-LMTATLEWEGIPAYIIGIARGISATIGIAATILYPILQSRISTLRTGLWSIWSQWF-CLLICVASIWIHN---- 383 (493)
Q Consensus 310 L~f~~-l~~~yl~~~gls~~~iG~~r~~~av~GllgT~~~~~l~~riGl~r~g~~~~~~q~~-~L~~~v~~~~~~~---- 383 (493)
-++-+ ..+..-++-|+++.+.|++-+.--++..++.+..+++..|.|-.|...++...-.+ +++.++..+..+.
T Consensus 49 ~g~~~~~l~~iek~F~lss~~~G~i~s~~~i~~~~~~i~v~~~~~r~~r~~~i~~g~ll~~lg~ll~alphf~~~~y~~~ 128 (633)
T TIGR00805 49 NGLVNSSLTTIERRFKLSTSSSGLINGSYEIGNLLLIIFVSYFGTKLHRPIVIGIGCAIMGLGSFLLSLPHFLSGRYSYS 128 (633)
T ss_pred HHHHHhhchhhhhhhCCCCCcceeeeehhhHHHHHHHHHHHHhhcccCcceEEEecHHHHHHHHHHHhChHHhcCCcccc
Confidence 34434 34444446899999999999999999999999999999999977765555431111 1111111111100
Q ss_pred ---------h------------------------------HHHHHHHHHHHHhhhchhhhhhhhhhhhhhccCCCCcchh
Q 011118 384 ---------S------------------------------LVAAYMLMVGVATSRLGLWMFDLSVIQQMQDLVPESDRCV 424 (493)
Q Consensus 384 ---------~------------------------------~~s~~~l~~gi~~SR~GLw~fDl~~~~l~Qe~vp~~~rG~ 424 (493)
+ .....+++.+-++..+|.-.+-.....++-|++|+++|++
T Consensus 129 ~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~l~GiG~~~~~~~~~~~i~d~~~~~~~~~ 208 (633)
T TIGR00805 129 TTVSSTGNLSSANSFLCMENLTQALRPTQCPSECQKQHKESLMWLLFLVSQLLRGIGATPIFPLGISYIDDFAKSKNSPL 208 (633)
T ss_pred ccccccccccccccccccCCCCCCccccccccccccccCCCceehhhHHHHHHHhccCCcchhcCchhhhccCCccccHH
Confidence 0 0124456677888888888888888999999999999999
Q ss_pred HHHHHHHHHHhhHHHHHHHH
Q 011118 425 VGGVQNSLQSTMDLMAYTMG 444 (493)
Q Consensus 425 v~gv~~sl~~~f~l~~~~~~ 444 (493)
..|+..+...+.+.+.++++
T Consensus 209 ~~~i~~~~~~iG~~lG~llg 228 (633)
T TIGR00805 209 YIGILESIAVFGPAFGYLLG 228 (633)
T ss_pred HHHHHHHHHHhhhHHHHHHH
Confidence 99999999888877666665
No 209
>COG2271 UhpC Sugar phosphate permease [Carbohydrate transport and metabolism]
Probab=94.61 E-value=0.37 Score=51.31 Aligned_cols=168 Identities=13% Similarity=0.081 Sum_probs=105.3
Q ss_pred hHHHHHHHHHHHHhhhhhhHHHHHHHHcCCCchHHHHHHHHHHHHHHHHHHHHHHHHhhhchhhhhHHHHHHHHHHHHHH
Q 011118 296 VLPGVSLALLFFTVLSFGTLMTATLEWEGIPAYIIGIARGISATIGIAATILYPILQSRISTLRTGLWSIWSQWFCLLIC 375 (493)
Q Consensus 296 ~la~~alalLy~tVL~f~~l~~~yl~~~gls~~~iG~~r~~~av~GllgT~~~~~l~~riGl~r~g~~~~~~q~~~L~~~ 375 (493)
+-.-++++.-|++=-+|+-.|..-..+.|++.+++|++.++-.++==++-++.+.+..|.++.+-...++. +.+
T Consensus 32 ~~~fiGYa~fYl~RknF~~a~p~l~e~~~lsk~~lG~i~s~f~i~YG~sKf~~G~~sDr~npr~fm~~gLi------lsa 105 (448)
T COG2271 32 LSIFIGYAAFYLTRKNFNLAMPALIEDGGLSKTQLGILGSAFSITYGVSKFVMGVLSDRSNPRYFMAFGLI------LSA 105 (448)
T ss_pred HHHHHHHHHHHHHHHhHhhccHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHhhhhcccCCCceeehHHHH------HHH
Confidence 34557788999988888877775444566999999999999777767899999999999998876555553 111
Q ss_pred HHHHhhcchHHHHHHHHHHHHhhhchh-hhhhhhhhhhhhccCCCCcchhHHHHHHHHHHhh-HHHHHHH--HHhccCCC
Q 011118 376 VASIWIHNSLVAAYMLMVGVATSRLGL-WMFDLSVIQQMQDLVPESDRCVVGGVQNSLQSTM-DLMAYTM--GIIISNPQ 451 (493)
Q Consensus 376 v~~~~~~~~~~s~~~l~~gi~~SR~GL-w~fDl~~~~l~Qe~vp~~~rG~v~gv~~sl~~~f-~l~~~~~--~ii~~~p~ 451 (493)
+.....+- ..++.++....++..+.= |+. ..-...+-.+-|.+|||+.-++=++-.|+- -+...+. +.+...-+
T Consensus 106 i~nil~Gf-s~s~~~~~~l~~lng~fQg~Gw-pp~~~~i~~Wfsr~eRG~~~siWn~shNiGGal~~~~~~la~~~~~~~ 183 (448)
T COG2271 106 IVNILFGF-SPSLFLFAVLWVLNGWFQGMGW-PPCARTITHWFSRKERGTWWSIWNTSHNIGGALAPLVALLAFFAFHGG 183 (448)
T ss_pred HHHHHHhh-hhHHHHHHHHHHHHHHHhcCCC-cHHHHHHHHHcCccccCceEEEehhhhhcccchHHHHHHHHHHHhccc
Confidence 22222211 114444444333332211 111 223334456789999999999888777766 4444444 55655445
Q ss_pred CchHHHHHHHHHHHHHHHHH
Q 011118 452 DFWKLILISVIVVTLAAILY 471 (493)
Q Consensus 452 ~F~~l~~~S~~~V~~~~~l~ 471 (493)
-......-++.++..|.+++
T Consensus 184 w~~~f~~pgiiaiival~~~ 203 (448)
T COG2271 184 WRAAFYFPGIIAIIVALILL 203 (448)
T ss_pred hhHHHHHHHHHHHHHHHHHH
Confidence 55555555666666554433
No 210
>PF12832 MFS_1_like: MFS_1 like family
Probab=94.52 E-value=0.25 Score=39.98 Aligned_cols=52 Identities=21% Similarity=0.261 Sum_probs=46.2
Q ss_pred hhhHHHHHHHHcCCCchHHHHHHHHHHHHHHHHHHHHHHHHhhhchhhhhHH
Q 011118 312 FGTLMTATLEWEGIPAYIIGIARGISATIGIAATILYPILQSRISTLRTGLW 363 (493)
Q Consensus 312 f~~l~~~yl~~~gls~~~iG~~r~~~av~GllgT~~~~~l~~riGl~r~g~~ 363 (493)
+-.-...|++++|+++.++|++.++.-...++++.+.+.+.+|.|-.|..+.
T Consensus 19 ~~Pfl~~~~~~~Gl~~~~iGil~~i~~~~~~~~~pl~g~laDk~~~~~~~l~ 70 (77)
T PF12832_consen 19 LYPFLPLYLKQLGLSPSQIGILSAIRPLIRFLAPPLWGFLADKFGKRKVILL 70 (77)
T ss_pred HHhhhhHhhhhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCccHHHHH
Confidence 4446778888999999999999999999999999999999999998777653
No 211
>PRK10429 melibiose:sodium symporter; Provisional
Probab=94.38 E-value=1.1 Score=48.12 Aligned_cols=119 Identities=7% Similarity=0.014 Sum_probs=77.5
Q ss_pred hHHHHHHHH-cCCCchHHHHHHHHHHHHHHHHHHHHHHHHhhh----chhhh-hHHHHHHHHHHHHHHHHHHhhcc---h
Q 011118 314 TLMTATLEW-EGIPAYIIGIARGISATIGIAATILYPILQSRI----STLRT-GLWSIWSQWFCLLICVASIWIHN---S 384 (493)
Q Consensus 314 ~l~~~yl~~-~gls~~~iG~~r~~~av~GllgT~~~~~l~~ri----Gl~r~-g~~~~~~q~~~L~~~v~~~~~~~---~ 384 (493)
..+..|.++ .|+++..+|.+..++-+.....-.+.+.+..|. |-.|- -+++.. ....+....|.++ .
T Consensus 27 ~~l~~yyt~v~Gls~~~vg~i~~i~ri~dai~dp~~G~lsD~t~sr~Grrrp~il~g~i----~~~i~~~llf~~p~~~~ 102 (473)
T PRK10429 27 MYLMYYYTDVVGLSVGLVGTLFLVARIWDAINDPIMGWIVNNTRSRWGKFKPWILIGTL----ANSVVLFLLFSAHLFEG 102 (473)
T ss_pred HHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHhhchheeehhcCCCCCCCcchhHhhhhH----HHHHHHHHHHcCCCCCc
Confidence 334556664 799999999999999998888888888888854 64332 222221 1111212223321 1
Q ss_pred HHHHHHHHHHHHhhhchhhhhhhhhhhhhhccC-CCCcchhHHHHHHHHHHhh
Q 011118 385 LVAAYMLMVGVATSRLGLWMFDLSVIQQMQDLV-PESDRCVVGGVQNSLQSTM 436 (493)
Q Consensus 385 ~~s~~~l~~gi~~SR~GLw~fDl~~~~l~Qe~v-p~~~rG~v~gv~~sl~~~f 436 (493)
......++...++.+++...+|+....+.=|.. +++||.++++..+...++.
T Consensus 103 ~~~~~~~~~~~~l~~~~~t~~~ip~~al~~~lt~~~~eR~~l~~~~~~~~~ig 155 (473)
T PRK10429 103 TAQYVFVCVTYILWGMTYTIMDIPFWSLVPTLTLDKREREQLVPYPRFFASLA 155 (473)
T ss_pred cHHHHHHHHHHHHHHHHHHHHcchHHhhhHHhCCCHHHHHHHHHHHHHHHHHH
Confidence 122333444455567888888999999998888 6889999999866655544
No 212
>COG2223 NarK Nitrate/nitrite transporter [Inorganic ion transport and metabolism]
Probab=92.99 E-value=2.1 Score=45.60 Aligned_cols=141 Identities=15% Similarity=0.156 Sum_probs=92.0
Q ss_pred chHHHHHHHHHHHHh-hhhhhHHHHHHHHcCCCchHHHHHHHHHHHHHHHHHHHHHHHHhhhchhhhhHHHHHHHHHHHH
Q 011118 295 VVLPGVSLALLFFTV-LSFGTLMTATLEWEGIPAYIIGIARGISATIGIAATILYPILQSRISTLRTGLWSIWSQWFCLL 373 (493)
Q Consensus 295 v~la~~alalLy~tV-L~f~~l~~~yl~~~gls~~~iG~~r~~~av~GllgT~~~~~l~~riGl~r~g~~~~~~q~~~L~ 373 (493)
.+..+...-.+.|.| .-++.+++..-..-|+|+.+.+++-++-.+.|-+-=+.++.+..|+|-.+....+.. +.++
T Consensus 15 ~L~~S~~af~v~F~VW~l~s~l~~~i~~~~~LS~~q~~ll~aiPil~GallRl~~g~l~drfGgR~~~~~s~~---l~~I 91 (417)
T COG2223 15 NLWLSTLAFDVGFMVWTLFSPLGVFIKSDFGLSEGQKGLLVAIPILVGALLRLPYGFLTDRFGGRKWTILSML---LLLI 91 (417)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhhccccCCCHHHHHHHHHHHHHHhHHHHHHHHhhhcccCchHHHHHHHH---HHHH
Confidence 444444444444444 346666664444799999999999999999999999999999999998888776665 5677
Q ss_pred HHHHHHhh--cch--HHHHHHHHHHHHhhhchhhhhhhhhhhhhhccCCCCcchhHHHHHHHHHHhhHHHHHHHH
Q 011118 374 ICVASIWI--HNS--LVAAYMLMVGVATSRLGLWMFDLSVIQQMQDLVPESDRCVVGGVQNSLQSTMDLMAYTMG 444 (493)
Q Consensus 374 ~~v~~~~~--~~~--~~s~~~l~~gi~~SR~GLw~fDl~~~~l~Qe~vp~~~rG~v~gv~~sl~~~f~l~~~~~~ 444 (493)
|+....+. .++ ..-+..++.|+.-..+-.-+ ...-+.-|++++|..+|+...=|.+..+..++.=
T Consensus 92 P~~~~~~a~~~~~~~~ll~~gll~G~~GasFav~m------~~~s~~fP~~~qG~AlGI~g~GN~G~av~q~~~P 160 (417)
T COG2223 92 PCLGLAFAVTYPSTWQLLVIGLLLGLAGASFAVGM------PNASFFFPKEKQGLALGIAGAGNLGVAVAQLVAP 160 (417)
T ss_pred HHHHHHHHccCCchHHHHHHHHHHhcccceehccc------ccccccCChhhhhHHHHHhccccccHHHHHHHHH
Confidence 77665554 222 22333444444433332222 2334677999999999998733333344444433
No 213
>PRK09669 putative symporter YagG; Provisional
Probab=92.60 E-value=2.5 Score=44.82 Aligned_cols=118 Identities=14% Similarity=0.103 Sum_probs=73.3
Q ss_pred HHHHHH-HcCCCchHHHHHHHHHHHHHHHHHHHHHHHHhhhch----hhhhH-HHHHHHHHHHHHHHHHHhhcc--hHHH
Q 011118 316 MTATLE-WEGIPAYIIGIARGISATIGIAATILYPILQSRIST----LRTGL-WSIWSQWFCLLICVASIWIHN--SLVA 387 (493)
Q Consensus 316 ~~~yl~-~~gls~~~iG~~r~~~av~GllgT~~~~~l~~riGl----~r~g~-~~~~~q~~~L~~~v~~~~~~~--~~~s 387 (493)
+..|.+ ..|+|+..+|.+..++.+.......+.+.+..|.+. .|--+ ++.. .+.....+.++.|. ....
T Consensus 32 l~~~~t~~~gls~~~~g~i~~i~~i~dai~dp~~G~lsD~~~~r~Grrrp~il~~~~---~~~i~~~l~f~~p~~~~~~~ 108 (444)
T PRK09669 32 LAYFYTDVFGLSAAIMGTMFLVVRVLDAVTDPLMGALVDRTRTRHGQFRPYLLWFAI---PFGVVCLLTFYTPDFGATGK 108 (444)
T ss_pred HHHHHHHhcCCCHHHHHHHHHHHHHHHHcccceeeEeeecCCCCCCCcchhHHHHHH---HHHHHHHHHHhCCCCCcchH
Confidence 344444 589999999999999999988888888999888552 22211 2211 11122222233432 1122
Q ss_pred HHHHHHHHHhhhchhhhhhhhhhhhhhccC-CCCcchhHHHHHHHHHHhh
Q 011118 388 AYMLMVGVATSRLGLWMFDLSVIQQMQDLV-PESDRCVVGGVQNSLQSTM 436 (493)
Q Consensus 388 ~~~l~~gi~~SR~GLw~fDl~~~~l~Qe~v-p~~~rG~v~gv~~sl~~~f 436 (493)
...+.+...+...+...+++....+.=|.. ++++|++.++......+..
T Consensus 109 ~~~~~~~~~l~~~~~t~~~ip~~al~~~~t~~~~eR~~l~~~r~~~~~~G 158 (444)
T PRK09669 109 IIYACVTYILLSLVYTAINVPYCAMPGAITNDPRERHSLQSWRFALSFIG 158 (444)
T ss_pred HHHHHHHHHHHHHHHHhhcchHHHhHHHhcCCHHHHHHHHHHHHHHHHHH
Confidence 333333334446666778888888887776 5678998888776665554
No 214
>COG2807 CynX Cyanate permease [Inorganic ion transport and metabolism]
Probab=92.51 E-value=7.9 Score=40.75 Aligned_cols=165 Identities=13% Similarity=0.074 Sum_probs=105.8
Q ss_pred hhhhHHHHHHHHcCCCchHHHHHHHHHHHHHHHHHHHHHHHHhhhchhhhhHHHHHHHHHHHHHHHHHHhhcchHHHHHH
Q 011118 311 SFGTLMTATLEWEGIPAYIIGIARGISATIGIAATILYPILQSRISTLRTGLWSIWSQWFCLLICVASIWIHNSLVAAYM 390 (493)
Q Consensus 311 ~f~~l~~~yl~~~gls~~~iG~~r~~~av~GllgT~~~~~l~~riGl~r~g~~~~~~q~~~L~~~v~~~~~~~~~~s~~~ 390 (493)
+.+.+.-.--.+.|+|.+..|++-++=.+.==+-+...|++.||+|..|+-.+++. ++..+. .+- +......
T Consensus 30 svgPLL~~Ir~~~gls~s~aGlLTtLPll~fg~~ap~a~~Lar~~g~er~l~~~Ll----li~~G~--~iR--~~~~~~~ 101 (395)
T COG2807 30 SVGPLLDEIRQDLGLSFSVAGLLTTLPLLAFGLFAPAAPRLARRFGEERSLFLALL----LIAAGI--LIR--SLGGLPL 101 (395)
T ss_pred hhhhhHHHHHHHhcccHHHHHHHHHHHHHHHHHHHhhhHHHHHHHhhHHHHHHHHH----HHHHHH--HHH--hcccHHH
Confidence 44455443333689999999999988776655677888999999999999876553 333222 221 2225667
Q ss_pred HHHHHHhhhchhhhhhhhhhhhhhccCCCCcchhHHHHHHHHHHhh-HHHHHHHHHhccCCCCchHHHHHHHHHHHHHHH
Q 011118 391 LMVGVATSRLGLWMFDLSVIQQMQDLVPESDRCVVGGVQNSLQSTM-DLMAYTMGIIISNPQDFWKLILISVIVVTLAAI 469 (493)
Q Consensus 391 l~~gi~~SR~GLw~fDl~~~~l~Qe~vp~~~rG~v~gv~~sl~~~f-~l~~~~~~ii~~~p~~F~~l~~~S~~~V~~~~~ 469 (493)
++.|..+...|.=.-|+-.-.++++.-|++ -|.++|+...--+.. -+.+....=+...- ++|=....+-+..+...
T Consensus 102 L~~gt~l~G~gIav~nVLLPslIK~~Fpk~-~~~mtglYs~sl~~~aaLaa~lavpla~~~--~gW~~aL~~WAl~allA 178 (395)
T COG2807 102 LFLGTLLAGAGIAVINVLLPSLIKRDFPKR-VGLMTGLYSTSLGAGAALAAALAVPLAQHS--GGWRGALGFWALLALLA 178 (395)
T ss_pred HHHHHHHHHhhHHHHHHhhhHHHHhhcccc-hhhHHhHHHHHHHHHHHHHhhhhhHHHHhh--ccHHHHHHHHHHHHHHH
Confidence 778888888888888999999999999876 678888876544443 55554444333222 35655555555554433
Q ss_pred HHHHHHHH-hhc-CCCChhh
Q 011118 470 LYTFHLYR-IRK-HLFHFDK 487 (493)
Q Consensus 470 l~~~~~~~-~Rg-hl~h~~~ 487 (493)
+. .|.-. .|+ |.-|-.+
T Consensus 179 l~-~WlPq~~r~~~~~~~~~ 197 (395)
T COG2807 179 LL-IWLPQALREQAASIATK 197 (395)
T ss_pred HH-HHhhhcccccccccccc
Confidence 33 33222 343 5555544
No 215
>PF06609 TRI12: Fungal trichothecene efflux pump (TRI12); InterPro: IPR010573 This family consists of several fungal specific trichothecene efflux pump proteins. Many of the genes involved in trichothecene toxin biosynthesis in Fusarium sporotrichioides are present within a gene cluster. It has been suggested that TRI12 may play a role in F. sporotrichioides self-protection against trichothecenes [].
Probab=91.89 E-value=6.8 Score=43.91 Aligned_cols=133 Identities=10% Similarity=-0.018 Sum_probs=75.2
Q ss_pred eeecccchHHHHHHHHHHH----HhhhhhhHHHHHHH-HcCCCchHHHHHHHHHHHHHHHHHHHHHHHHhhhchhhhhHH
Q 011118 289 VYLKQEVVLPGVSLALLFF----TVLSFGTLMTATLE-WEGIPAYIIGIARGISATIGIAATILYPILQSRISTLRTGLW 363 (493)
Q Consensus 289 ~y~~q~v~la~~alalLy~----tVL~f~~l~~~yl~-~~gls~~~iG~~r~~~av~GllgT~~~~~l~~riGl~r~g~~ 363 (493)
-|++.|.+.++++...+++ .++...+-...|.. +.|=+ ...+++-+.-.+..-.+..+.++|...+|- |-..+
T Consensus 35 g~~~s~~~i~~~~~~~~~~~~~~~~~~~~a~~l~~I~~diG~~-~~~~w~~~~~~l~~av~~~~~G~LSDlfGR-r~~~i 112 (599)
T PF06609_consen 35 GYYRSPRFIASFAAFSLAVIAAYFVLVLPASILPYINADIGGS-DNWSWFSTAWTLASAVSFPFVGRLSDLFGR-RYFFI 112 (599)
T ss_pred CceeCHHHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHhcCCC-ccchHHHHHHHHHHHHHHHhhHHHHHHhcc-hHHHH
Confidence 3567888888876544432 12333233334666 46644 344445455555555666677888888883 33222
Q ss_pred HHHHHHHHHHHHHHHHhhcchHHHHHHHHHHHHhhhchhhhhhhhhhhhhhccCCCCcchhHHHHHH
Q 011118 364 SIWSQWFCLLICVASIWIHNSLVAAYMLMVGVATSRLGLWMFDLSVIQQMQDLVPESDRCVVGGVQN 430 (493)
Q Consensus 364 ~~~~q~~~L~~~v~~~~~~~~~~s~~~l~~gi~~SR~GLw~fDl~~~~l~Qe~vp~~~rG~v~gv~~ 430 (493)
.-. .+.+...+.. ...-++-.+..|.++..+| -+......-.++|.+|.+.|+...++..
T Consensus 113 ~g~--~l~vvG~Iv~----atA~~~~~~iag~~l~Gvg-aG~~~~~~~~isEl~p~k~R~~~~~~~~ 172 (599)
T PF06609_consen 113 IGS--LLGVVGSIVC----ATAQNMNTFIAGMVLYGVG-AGVQELAALAISELVPNKWRGLGLAIAS 172 (599)
T ss_pred HHH--HHHHhHHHHh----hcCCcHHHHHHHHHHHHHh-hHHHHHHHHHHHHhcccchhhhHhHHHH
Confidence 111 1222222211 1223455667788888887 4666666667899999998887655443
No 216
>KOG2563 consensus Permease of the major facilitator superfamily [General function prediction only]
Probab=91.06 E-value=26 Score=37.97 Aligned_cols=162 Identities=12% Similarity=0.087 Sum_probs=88.3
Q ss_pred HHHH-HHhhhhhhHHHHHH---HHcCCCchHHHHHHHHHHHHHHHHHHHHHHHHhhhchhhh-hHHHHHHHHHHHHHHHH
Q 011118 303 ALLF-FTVLSFGTLMTATL---EWEGIPAYIIGIARGISATIGIAATILYPILQSRISTLRT-GLWSIWSQWFCLLICVA 377 (493)
Q Consensus 303 alLy-~tVL~f~~l~~~yl---~~~gls~~~iG~~r~~~av~GllgT~~~~~l~~riGl~r~-g~~~~~~q~~~L~~~v~ 377 (493)
++.| ..+-.|.++++.-- .-+|++...-|..-..+.+.|++|+.+++.+..|.+--+. ...... .-..+++
T Consensus 272 ~~~ygi~~g~F~~l~~~l~~~l~~sgY~~~~aG~ig~l~iv~Gmlga~~~gii~Dktk~fk~~~~v~~~----~~~v~~~ 347 (480)
T KOG2563|consen 272 AICYGIGLGLFNSLSTLLNLALCPSGYEGVFAGYIGALMIVAGMLGALASGIIADKTKKFKLTTLVLYL----FALVGTL 347 (480)
T ss_pred HHHHhhhHHHHHHHHHHhhhccccccCCccccchhHHHHHHHHHHHHHHHHhhhhhhhhHHHHHHHHHH----HHHHHHH
Confidence 3444 23334666655444 2478887778888888899999999999999988775443 221111 1111111
Q ss_pred HHh--hcchHHHHHHHHHHHHhhhchhhhhhhhhhhhhhccC-CCCcchhHHHHHHHHHHhh-HHHHHHHHHhccCCC--
Q 011118 378 SIW--IHNSLVAAYMLMVGVATSRLGLWMFDLSVIQQMQDLV-PESDRCVVGGVQNSLQSTM-DLMAYTMGIIISNPQ-- 451 (493)
Q Consensus 378 ~~~--~~~~~~s~~~l~~gi~~SR~GLw~fDl~~~~l~Qe~v-p~~~rG~v~gv~~sl~~~f-~l~~~~~~ii~~~p~-- 451 (493)
.+. +..+..++.++.....+- +..-++=..-..+==|.+ |+.|+. =+|+.+...+.| -...+.++....+++
T Consensus 348 ~l~~~t~~~~~~viv~~t~~~~g-~~~~~~~Pig~ElgvE~TyPv~E~t-SsGll~~~gq~f~~~~~~~~~~~~~~~~~~ 425 (480)
T KOG2563|consen 348 MLLTCTLFLGDSVIVFTTCGLLG-FFGTGYLPIGFELGVETTYPVAEGT-SSGLLNLSGQIFGVILVFIMGILAEDLGPP 425 (480)
T ss_pred HHHHhhccCCceEehhhhHHHHH-HhhcCCCCcceeeeeeeccccCCcc-cceeEEeehhHHHHHHHHHHHHHhhccCCC
Confidence 111 111222222222221110 001111122222333555 666553 466667777777 778888999999998
Q ss_pred --CchHHHHHHHHHHHHHHHH
Q 011118 452 --DFWKLILISVIVVTLAAIL 470 (493)
Q Consensus 452 --~F~~l~~~S~~~V~~~~~l 470 (493)
.+...+.....++......
T Consensus 426 ~~~~~~~i~~~~~~~l~~~lv 446 (480)
T KOG2563|consen 426 GNTFPANIFLTVSALLGAILV 446 (480)
T ss_pred CCCccchhHhHHHHHHHHHHH
Confidence 8877776666666544433
No 217
>COG0738 FucP Fucose permease [Carbohydrate transport and metabolism]
Probab=90.93 E-value=6.6 Score=41.81 Aligned_cols=120 Identities=6% Similarity=-0.003 Sum_probs=88.1
Q ss_pred hhHHHHHHHH-cCCCchHHHHHHHHHHHHHHHHHHHHHHHHhhhchhhhhHHHHHHHHHHHHHHHHHHhhcchHHHHHHH
Q 011118 313 GTLMTATLEW-EGIPAYIIGIARGISATIGIAATILYPILQSRISTLRTGLWSIWSQWFCLLICVASIWIHNSLVAAYML 391 (493)
Q Consensus 313 ~~l~~~yl~~-~gls~~~iG~~r~~~av~GllgT~~~~~l~~riGl~r~g~~~~~~q~~~L~~~v~~~~~~~~~~s~~~l 391 (493)
.+.++..+++ -+++..+.+...-.-=.+=.++.+.++++.||+|-.++-..++. ++...|.+ +|.......-..|
T Consensus 32 ~diLip~l~~~f~ls~~~a~liqfaff~gYf~~~lpa~~~~kk~gyk~gi~lgL~---l~avg~~l-F~pAa~~~~y~~F 107 (422)
T COG0738 32 NDILIPHLKEVFDLTYFEASLIQFAFFGGYFIMSLPAGLLIKKLGYKAGIVLGLL---LYAVGAAL-FWPAASSKSYGFF 107 (422)
T ss_pred chhhHHHHHHHhCccHHHHHHHHHHHHHHHHHHhccHHHHHHHhhhHHHHHHHHH---HHHHHHHH-HhhhhhhhhHHHH
Confidence 3466667775 89999999988877666667899999999999999998887775 45554443 4433345566777
Q ss_pred HHHHHhhhchhhhhhhhhhhhhhccCCCCcchhHHHHHHHHHHhh
Q 011118 392 MVGVATSRLGLWMFDLSVIQQMQDLVPESDRCVVGGVQNSLQSTM 436 (493)
Q Consensus 392 ~~gi~~SR~GLw~fDl~~~~l~Qe~vp~~~rG~v~gv~~sl~~~f 436 (493)
+++......|+-..|.+.+.++-..=|++.-.+=.+...++|.+-
T Consensus 108 L~~lFila~Gi~~LetaaNp~v~~lg~~~~a~~rlnl~q~fn~lG 152 (422)
T COG0738 108 LVALFILASGIGLLETAANPYVTLLGKPESAAFRLNLAQAFNGLG 152 (422)
T ss_pred HHHHHHHHhhhHHHHhccchHHHHhCCchhHHHHHHHHHHhhhhH
Confidence 888888889999999999999998887754444444444444444
No 218
>PF00083 Sugar_tr: Sugar (and other) transporter; InterPro: IPR005828 Recent genome-sequencing data and a wealth of biochemical and molecular genetic investigations have revealed the occurrence of dozens of families of primary and secondary transporters. Two such families have been found to occur ubiquitously in all classifications of living organisms. These are the ATP-binding cassette (ABC) superfamily and the major facilitator superfamily (MFS), also called the uniporter-symporter-antiporter family. While ABC family permeases are in general multicomponent primary active transporters, capable of transporting both small molecules and macromolecules in response to ATP hydrolysis the MFS transporters are single-polypeptide secondary carriers capable only of transporting small solutes in response to chemiosmotic ion gradients. Although well over 100 families of transporters have now been recognised and classified, the ABC superfamily and MFS account for nearly half of the solute transporters encoded within the genomes of microorganisms. They are also prevalent in higher organisms. The importance of these two families of transport systems to living organisms can therefore not be overestimated []. The MFS was originally believed to function primarily in the uptake of sugars but subsequent studies revealed that drug efflux systems, Krebs cycle metabolites, organophosphate:phosphate exchangers, oligosaccharide:H1 symport permeases, and bacterial aromatic acid permeases were all members of the MFS. These observations led to the probability that the MFS is far more widespread in nature and far more diverse in function than had been thought previously. 17 subgroups of the MFS have been identified []. Evidence suggests that the MFS permeases arose by a tandem intragenic duplication event in the early prokaryotes. This event generated a 2-transmembrane-spanner (TMS) protein topology from a primordial 6-TMS unit. Surprisingly, all currently recognised MFS permeases retain the two six-TMS units within a single polypeptide chain, although in 3 of the 17 MFS families, an additional two TMSs are found []. Moreover, the well-conserved MFS specific motif between TMS2 and TMS3 and the related but less well conserved motif between TMS8 and TMS9 [] prove to be a characteristic of virtually all of the more than 300 MFS proteins identified.; GO: 0022857 transmembrane transporter activity, 0055085 transmembrane transport, 0016021 integral to membrane
Probab=90.72 E-value=0.00041 Score=73.42 Aligned_cols=125 Identities=14% Similarity=0.131 Sum_probs=66.9
Q ss_pred HHcCCCch-HHHHHHHHHHHHHHHHHHHHHHHHhhhchhhhhHHHHHHHHHHHHHHH-HHHhh-cch----HHHHHHHHH
Q 011118 321 EWEGIPAY-IIGIARGISATIGIAATILYPILQSRISTLRTGLWSIWSQWFCLLICV-ASIWI-HNS----LVAAYMLMV 393 (493)
Q Consensus 321 ~~~gls~~-~iG~~r~~~av~GllgT~~~~~l~~riGl~r~g~~~~~~q~~~L~~~v-~~~~~-~~~----~~s~~~l~~ 393 (493)
++.|.++. ...... .+..+.+++.+..+.+|+|-.+.-+.+.....+|..... ...+. ..+ .........
T Consensus 281 ~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~GRr~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~l 357 (451)
T PF00083_consen 281 ENAGISNSFLATLIL---GLVNFLGTLLAIFLIDRFGRRKLLIIGLLLMAICSLILGIIFFLGVSSSSWWSILSIVFLAL 357 (451)
T ss_pred ccccccccccccccc---ccccccccccccccccccccccccccccccccccccccccccccccccccccccccceeeee
Confidence 35777776 233222 246677788888888999866565555543333322211 11121 111 111111111
Q ss_pred HHHhhhchhhhhhhhhhhhhhccCCCCcchhHHHHHHHHHHhhH-HHHHHHHHhccCCC
Q 011118 394 GVATSRLGLWMFDLSVIQQMQDLVPESDRCVVGGVQNSLQSTMD-LMAYTMGIIISNPQ 451 (493)
Q Consensus 394 gi~~SR~GLw~fDl~~~~l~Qe~vp~~~rG~v~gv~~sl~~~f~-l~~~~~~ii~~~p~ 451 (493)
..+ .++ .+.......+..|..|.+.|++..|.-.+++++.. +..++...+....+
T Consensus 358 ~~~--~~~-~g~~~~~~~~~~ElfPt~~R~~~~~~~~~~~~i~~~i~~~~~~~~~~~~~ 413 (451)
T PF00083_consen 358 FFA--FFS-LGWGPLPWIYTAELFPTKVRSTGIGLSYAVGRIGGFIIPFLFPYLFNNLG 413 (451)
T ss_pred ccc--ccc-cccccccccccccccccccccccccccccccccccccccccccccccccc
Confidence 111 111 13355555777999999999999999999888663 33334444443433
No 219
>PF06813 Nodulin-like: Nodulin-like; InterPro: IPR010658 This entry represents a conserved region within plant nodulin-like proteins and a number of uncharacterised proteins.
Probab=90.68 E-value=15 Score=36.64 Aligned_cols=145 Identities=10% Similarity=0.080 Sum_probs=85.7
Q ss_pred hhhhHHHHHHHHcCCCchHHHHHHHHHHHHHHHHHHHHHHHHhhhchhhhhHHHHHHHHHHHHHHHHHHhh------c-c
Q 011118 311 SFGTLMTATLEWEGIPAYIIGIARGISATIGIAATILYPILQSRISTLRTGLWSIWSQWFCLLICVASIWI------H-N 383 (493)
Q Consensus 311 ~f~~l~~~yl~~~gls~~~iG~~r~~~av~GllgT~~~~~l~~riGl~r~g~~~~~~q~~~L~~~v~~~~~------~-~ 383 (493)
.|+.--.......|++-.++..+-.++-+++-+| +..+.+-.+.|+-.+-.++.. +...+-...|. + .
T Consensus 20 ~Fs~yS~~Lk~~l~~sq~~l~~l~~~~~~G~~~G-~~~G~l~d~~gp~~~l~iG~~----~~~~GY~~~~l~~~~~i~~~ 94 (250)
T PF06813_consen 20 TFSAYSPQLKSRLGYSQSQLNTLSTAGDIGSYFG-ILAGLLYDRFGPWVVLLIGAV----LGFVGYGLLWLAVSGRIPSL 94 (250)
T ss_pred chhhhhHHHHHHhCCCHHHHHHHHHHHHHHhhcc-HHHHHHHHhcchHHHHHHHHH----HHHHHHHHHHHHHhCccCcc
Confidence 3444444333368999999999998888888876 788999999997665555543 11111112221 1 2
Q ss_pred hHHHHHHHHHHHHhhhchhhhhhhhhhhhhhccCCCCcchhHHHHHHHHHHhh-HHHHHHHHHhccCCCCchHHHHHHHH
Q 011118 384 SLVAAYMLMVGVATSRLGLWMFDLSVIQQMQDLVPESDRCVVGGVQNSLQSTM-DLMAYTMGIIISNPQDFWKLILISVI 462 (493)
Q Consensus 384 ~~~s~~~l~~gi~~SR~GLw~fDl~~~~l~Qe~vp~~~rG~v~gv~~sl~~~f-~l~~~~~~ii~~~p~~F~~l~~~S~~ 462 (493)
+.+... .-..+...|--.+|-+...---++-|+ +||.+.|+.-+..-+. .+.+.+-..++++ +.-.++.+.+..
T Consensus 95 ~~~~~~---~~~~l~~~s~~~~~ta~lvt~~~NFP~-~RG~vvgilk~~~GLSaai~t~i~~~~f~~-~~~~fll~la~~ 169 (250)
T PF06813_consen 95 PVWLMC---LFLFLGGNSSCWFNTASLVTCVRNFPR-SRGTVVGILKGFFGLSAAIFTQIYSAFFGD-DPSSFLLFLAVL 169 (250)
T ss_pred chHHHH---HHHHHHcccHHHhhhHHHHHHHHhCcc-ccCceehhhhHHHHhHHHHHHHHHHHHcCC-ChHHHHHHHHHH
Confidence 233322 222233344444555433333355675 7999999999988887 6666666666555 444445555554
Q ss_pred HHH
Q 011118 463 VVT 465 (493)
Q Consensus 463 ~V~ 465 (493)
...
T Consensus 170 ~~~ 172 (250)
T PF06813_consen 170 PAV 172 (250)
T ss_pred HHH
Confidence 443
No 220
>PF05978 UNC-93: Ion channel regulatory protein UNC-93; InterPro: IPR010291 The proteins in this family are represented by UNC-93 from Caenorhabditis elegans. UNC-93 colocalizes with SUP-10 and SUP-9 within muscle cells. Genetic studies suggest that these three proteins forms complex that coordinates muscle contraction. The function of UNC-93 is not known but is most likely an ion channel regulatory protein [].
Probab=89.90 E-value=8.1 Score=35.63 Aligned_cols=96 Identities=15% Similarity=0.131 Sum_probs=60.1
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhhhchhhhhHHHHHHHHHHHHHHHHHHhhcchHHHHHHHHHHHHhhhchhhhhhhh
Q 011118 329 IIGIARGISATIGIAATILYPILQSRISTLRTGLWSIWSQWFCLLICVASIWIHNSLVAAYMLMVGVATSRLGLWMFDLS 408 (493)
Q Consensus 329 ~iG~~r~~~av~GllgT~~~~~l~~riGl~r~g~~~~~~q~~~L~~~v~~~~~~~~~~s~~~l~~gi~~SR~GLw~fDl~ 408 (493)
-.++..+..+ ++.+..|.+.+++|..++..++.. +-.+-+++.+-+. -+.+..+-++..+|--.+-.+
T Consensus 42 slai~Y~~~~----~s~l~~P~iv~~lg~K~sm~lg~~----~y~~y~~~~~~~~----~~~l~~~s~l~G~~~a~lW~a 109 (156)
T PF05978_consen 42 SLAILYGSFA----ISCLFAPSIVNKLGPKWSMILGSL----GYAIYIASFFYPN----SYTLYPASALLGFGAALLWTA 109 (156)
T ss_pred HHHHHHHHHH----HHHHhHHHHHHHHhhHHHHHHHHH----HHHHHHHHHHhhh----HHHHHHHHHHHhhhhHHhhHh
Confidence 4444444433 445678999999999888877765 3333333333332 233334444445554444567
Q ss_pred hhhhhhccCCCCcchhHHHHHHHHHHhh
Q 011118 409 VIQQMQDLVPESDRCVVGGVQNSLQSTM 436 (493)
Q Consensus 409 ~~~l~Qe~vp~~~rG~v~gv~~sl~~~f 436 (493)
+-.++-+..+++.++|-.|++-++.+.-
T Consensus 110 qg~ylt~~s~~~~~~~~~~ifw~i~~~s 137 (156)
T PF05978_consen 110 QGTYLTSYSTEETIGRNTGIFWAIFQSS 137 (156)
T ss_pred hhHHHHHcCCHHHHhhHHHHHHHHHHHH
Confidence 7777778888999999888877776643
No 221
>TIGR01272 gluP glucose/galactose transporter. Disruption of the loci leads to the total loss of glucose or galactose uptake in E.coli. Putative transporters in other bacterial species were isolated by functional complementation, which restored it functional activity.
Probab=89.87 E-value=24 Score=35.73 Aligned_cols=133 Identities=8% Similarity=0.014 Sum_probs=69.2
Q ss_pred HHHHHHHh--CCCchHHHHHHHHHHHHHHHhhhccceeeecccchhHHHHHHHHHHHHHHHHHHHHHHHHHhhcccccch
Q 011118 40 VGLYMISV--WPDSLLFAAIYGAVESASIALFGPIVGHWVDKLTYVKVLQIWLVTQNLSFIVAGVSVITLLFFSSLKSTN 117 (493)
Q Consensus 40 ~~L~lv~l--~~~sll~~sv~gl~~~l~~llfg~~vG~~vDr~~R~~v~~~~~~~q~~~v~~s~~~~~~~l~~~~~~~~~ 117 (493)
.+.++.+. ++-+....+.+...-....++-....+.++||.+++|.++.+.+...+. .++.... . ..
T Consensus 163 ~~~yl~~~~~~g~s~~~a~~~~s~~~~~~~iGr~~~~~l~~r~g~~~~l~~~~~l~~~~-------~~l~~~~---~-~~ 231 (310)
T TIGR01272 163 LVNFLSDPHALGLPEDQAAHFTAYTWGGAMVGRFIGSAVMPMISQGRYLAFNAFLAVLL-------SIGAALT---H-GY 231 (310)
T ss_pred HHHHHHhcccCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHH-------HHHHHHc---C-CH
Confidence 45555533 3446666666666666666666667778899999888887665333222 1111111 1 11
Q ss_pred hHHHHHHHHHHHHHHHHHHhhhhhhhhhhccceEEEecCCCChhhhhhhhhHHHhHHHHHHhhhhHHHHHHHHhhhhHHH
Q 011118 118 FIAFVLLVILTNISGAVGVISTLAGTILIEREWVVVISEGHPPEALTKMNSIIRRIDLTCKLLAPAITGFIISFVSLQAS 197 (493)
Q Consensus 118 ~~~~~~l~~~~~~~g~~~~l~~~a~~iaieRDWvv~i~~~~~~~~L~~~Na~mrriDl~~~l~gP~~~G~l~~~~s~~~a 197 (493)
+..+. +.+ +.-+.+..+......+.++ . + ++-.+..+.+ ......-.++|.+.|.+.+..|...+
T Consensus 232 ~~~~~-~~l---~g~~~s~i~P~~~s~a~~~--~----~----~~~~~asai~-~~~~~Gg~i~P~l~G~lad~~g~~~a 296 (310)
T TIGR01272 232 VAMWF-VLA---LGLFNSIMFPTIFSLALNA--L----G----RHTSQGSGIL-CLAIVGGAIVPLLQGSLADCLGIQLA 296 (310)
T ss_pred HHHHH-HHH---HHHHHHHHHHHHHHHHHhh--h----h----hhhhhhHHHH-HHHHhcchHHHHHHHHHHHhccchHH
Confidence 11211 111 1112233333332333111 1 1 1212233333 56777888999999999998887666
Q ss_pred H
Q 011118 198 A 198 (493)
Q Consensus 198 ~ 198 (493)
.
T Consensus 297 ~ 297 (310)
T TIGR01272 297 F 297 (310)
T ss_pred H
Confidence 5
No 222
>KOG2325 consensus Predicted transporter/transmembrane protein [General function prediction only]
Probab=88.90 E-value=13 Score=40.52 Aligned_cols=81 Identities=12% Similarity=0.129 Sum_probs=54.5
Q ss_pred hchhhhhhhhhhhhhhccCCCCcchhHHHHHHHHHHhhHHHHHHHHHhccCCCCchHHHHHHHHHHHHHHHHHHHHHHHh
Q 011118 399 RLGLWMFDLSVIQQMQDLVPESDRCVVGGVQNSLQSTMDLMAYTMGIIISNPQDFWKLILISVIVVTLAAILYTFHLYRI 478 (493)
Q Consensus 399 R~GLw~fDl~~~~l~Qe~vp~~~rG~v~gv~~sl~~~f~l~~~~~~ii~~~p~~F~~l~~~S~~~V~~~~~l~~~~~~~~ 478 (493)
..+.=.-|....++--|...+..+|.+.|+...-.+..++..-+.....-.-...++++.+....++.+..+.....+|.
T Consensus 399 g~~~P~~~~~~~tlySkiLgp~~q~~~qg~~~~~~s~~~~~~~~~~t~~~~~~g~~~v~~~~~~~~l~~~~l~~~~~~r~ 478 (488)
T KOG2325|consen 399 GIAFPFISTALDTLYSKILGPRDQGTMQGVFSISGSIARVVGPIFSTAIFTLSGPRPVWIILLCLLLVVAALWIVFLKRL 478 (488)
T ss_pred ccccccccchHHHHHHHHhCCccccceeEEEEeccchhhhhhHHHHhhhHHhcCccHHHHHHHHHHHHHHHHHHHHHHhc
Confidence 33333446667788888889999999999887777777655544444444445566777777777776666666665554
Q ss_pred h
Q 011118 479 R 479 (493)
Q Consensus 479 R 479 (493)
+
T Consensus 479 ~ 479 (488)
T KOG2325|consen 479 V 479 (488)
T ss_pred c
Confidence 3
No 223
>COG0477 ProP Permeases of the major facilitator superfamily [Carbohydrate transport and metabolism / Amino acid transport and metabolism / Inorganic ion transport and metabolism / General function prediction only]
Probab=88.36 E-value=21 Score=33.45 Aligned_cols=71 Identities=20% Similarity=0.100 Sum_probs=51.8
Q ss_pred HHHHHHHHHHhhHHHHHHHHHHHHHhCCCch-HHHHHHHHHHHHHHHhhhccceeeecccchhHHHHHHHHH
Q 011118 22 LYVAHFLARWGARMWEFSVGLYMISVWPDSL-LFAAIYGAVESASIALFGPIVGHWVDKLTYVKVLQIWLVT 92 (493)
Q Consensus 22 L~~s~~lS~~Gdr~~~Fa~~L~lv~l~~~sl-l~~sv~gl~~~l~~llfg~~vG~~vDr~~R~~v~~~~~~~ 92 (493)
+..+.+.+..+...+....+.+......... ...+.......+...+..+..|.+.||++||+.+......
T Consensus 7 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~ 78 (338)
T COG0477 7 LALAALLLGLDLGLLSPALPLLLSTLSLSSGRLLYGLLLSAFFLGYAIGSLLAGPLGDRYGRRKVLIIGLLL 78 (338)
T ss_pred HHHHHHHHHHhcchHHHHHHHHHHHcCCCchhHHHHHHHHHHHHHHHHHhhhhhhccccccchHHHHHHHHH
Confidence 6677777778888999999997776654432 3455566666666666679999999999888666665543
No 224
>TIGR00788 fbt folate/biopterin transporter. The only functionally characterized members of the family are from protozoa and include FT1, the major folate transporter in Leishmania, and BT1, the Leishmania biopterin/folate transporter. A related protein in Trypanosoma brucei, ESAGIO, shows weak folate/biopterin transport activity.
Probab=87.81 E-value=21 Score=38.50 Aligned_cols=129 Identities=7% Similarity=-0.059 Sum_probs=75.2
Q ss_pred HHHHHHHH-cCCCchHHHHHHHHHHHHHHHHHHHHHHHHhhhch---hhhhHHHHHHHHHHHHHHHHHHhh-cchHHHHH
Q 011118 315 LMTATLEW-EGIPAYIIGIARGISATIGIAATILYPILQSRIST---LRTGLWSIWSQWFCLLICVASIWI-HNSLVAAY 389 (493)
Q Consensus 315 l~~~yl~~-~gls~~~iG~~r~~~av~GllgT~~~~~l~~riGl---~r~g~~~~~~q~~~L~~~v~~~~~-~~~~~s~~ 389 (493)
....|+++ +|++++++|.+.+.-.+.-.+--+ .+++..|+++ .|-. .+..+++........... +.+....
T Consensus 47 ~~~~~l~~~lg~s~~~i~~~~sl~~lpw~~K~l-~g~l~D~~~i~G~rRr~--~l~~~~~l~~~~~~~~l~~~~~~~~~- 122 (468)
T TIGR00788 47 PLSPMLTDDLGLDGARYQRLVGLSSLGWALKPF-AGVMSDTFPLFGYTKRW--YLVLSGLLGSAILYGLLPGKVSSAKV- 122 (468)
T ss_pred hhhHHHHHhcCCCHHHHHHHHHHHHHHHHHHHH-HHHHHHhcCCCCccchH--HHHHHHHHHHHHHHHhcccccchHHH-
Confidence 44556664 799999999999998888777666 8888888863 1222 222222111111111112 1121111
Q ss_pred HHHHHHHhhhchhhhhhhhhhhhhhccCCCCcchhHHHHHHH----HHHhhHHHHHHHHHhccC
Q 011118 390 MLMVGVATSRLGLWMFDLSVIQQMQDLVPESDRCVVGGVQNS----LQSTMDLMAYTMGIIISN 449 (493)
Q Consensus 390 ~l~~gi~~SR~GLw~fDl~~~~l~Qe~vp~~~rG~v~gv~~s----l~~~f~l~~~~~~ii~~~ 449 (493)
......+..++--..|++...++=|..+ ++++..++.|.. .+.++-++.++.+.+...
T Consensus 123 -~~~~~~l~~~~~a~~dv~~da~~~e~~~-~~~~~~~~~~s~~~~~~~~G~~vg~~l~G~l~~~ 184 (468)
T TIGR00788 123 -AAAFIFLAALAKALYDVLVDSLYSERIR-ESPSAGPSLVSWMWGASATGGLISSLLGGPLLDK 184 (468)
T ss_pred -HHHHHHHHHHHHHHHHHhHHHHHhhhhh-cCCCcCCCeeeHHHHHHHHHHHHHHHHHHHHHHh
Confidence 1223445557777889999999988888 555555555532 223446666677766654
No 225
>KOG4686 consensus Predicted sugar transporter [Carbohydrate transport and metabolism]
Probab=87.74 E-value=6.7 Score=40.20 Aligned_cols=167 Identities=17% Similarity=0.085 Sum_probs=93.8
Q ss_pred CCCcccccCCCcchhh-----HHHHHHHHHHHHHhhHHHHHHHHHHHHHhCCCchHHHHHHHHHHHHHHHhhhccceeee
Q 011118 3 SEPLIVQEQPAITSFL-----TTYLYVAHFLARWGARMWEFSVGLYMISVWPDSLLFAAIYGAVESASIALFGPIVGHWV 77 (493)
Q Consensus 3 ~~~~~~~~~~~~~~~~-----~~~L~~s~~lS~~Gdr~~~Fa~~L~lv~l~~~sll~~sv~gl~~~l~~llfg~~vG~~v 77 (493)
.|+-.-||+|++..++ |+.+..-+.+=-..--=+-=.-|.|...-|.-|....+-.-........+.+|..|..+
T Consensus 245 ~e~g~~Ge~pkLtdv~~f~ppfw~~~iicv~yyva~fPFi~lg~~fF~~rfGlS~~~a~~i~s~vy~Isav~spvfg~i~ 324 (459)
T KOG4686|consen 245 LEEGFLGEEPKLTDVNTFYPPFWVLVIICVLYYVAWFPFITLGPMFFQKRFGLSAVSAGNILSTVYGISAVLSPVFGAIS 324 (459)
T ss_pred hhcCcccCCcccccccccCccHHHHHHHHHHHHHHHHHHhhhhHHHHHHhhCCChhhccchhhhhhhhhhhhhhhHHHhH
Confidence 4566778888876643 44444444332221111111234555666666666555555556667778899999999
Q ss_pred cccchhHHHHHHHHHHHHHHHHHHHHHHHHHhhcccccchhHHHHHHHHHHHHHHHHHHhhhhhhhhhhccceEEEecCC
Q 011118 78 DKLTYVKVLQIWLVTQNLSFIVAGVSVITLLFFSSLKSTNFIAFVLLVILTNISGAVGVISTLAGTILIEREWVVVISEG 157 (493)
Q Consensus 78 Dr~~R~~v~~~~~~~q~~~v~~s~~~~~~~l~~~~~~~~~~~~~~~l~~~~~~~g~~~~l~~~a~~iaieRDWvv~i~~~ 157 (493)
|+++|+-....+-..-.+. +=.. +.++ ..+.|.... ++|-...+-..+.--. |+.++.+
T Consensus 325 Dk~G~n~~wv~~a~~~tl~---~H~~----l~Ft--~lsPy~~m~-------~lGLsysllAcslWP~-----va~~vpE 383 (459)
T KOG4686|consen 325 DKYGFNLWWVASACILTLL---GHSG----LFFT--FLSPYTSMT-------FLGLSYSLLACSLWPC-----VASLVPE 383 (459)
T ss_pred hhhcceehhHHHHHHHHHH---Hhhh----HHhh--hccHHHHHH-------HHhhhHHHHHHHHhhh-----hhhhCCH
Confidence 9999886654442111110 1000 0010 111221111 1122222222222223 4555553
Q ss_pred CChhhhhhhhhHHHhHHHHHHhhhhHHHHHHHHhhh
Q 011118 158 HPPEALTKMNSIIRRIDLTCKLLAPAITGFIISFVS 193 (493)
Q Consensus 158 ~~~~~L~~~Na~mrriDl~~~l~gP~~~G~l~~~~s 193 (493)
++|-.+-..|+.|....--..|+++|++.+.-|
T Consensus 384 ---~qLGTaygf~qsIqNLgla~i~Iiag~i~d~~g 416 (459)
T KOG4686|consen 384 ---EQLGTAYGFIQSIQNLGLAFIPIIAGFIADGDG 416 (459)
T ss_pred ---HHhcchHHHHHHHHhhhhhHHhhhhheeecCCC
Confidence 799999999999999999999999999988654
No 226
>COG4262 Predicted spermidine synthase with an N-terminal membrane domain [General function prediction only]
Probab=86.12 E-value=40 Score=35.59 Aligned_cols=171 Identities=16% Similarity=0.160 Sum_probs=95.0
Q ss_pred hhHHHHHHHHHHHHHhhHHHHHHHHHHHHHhCCCchHHHHHHHHHHHHHHHhhhccceeeeccc--chhHHHHHHHH--H
Q 011118 17 FLTTYLYVAHFLARWGARMWEFSVGLYMISVWPDSLLFAAIYGAVESASIALFGPIVGHWVDKL--TYVKVLQIWLV--T 92 (493)
Q Consensus 17 ~~~~~L~~s~~lS~~Gdr~~~Fa~~L~lv~l~~~sll~~sv~gl~~~l~~llfg~~vG~~vDr~--~R~~v~~~~~~--~ 92 (493)
|....|.++-+.-..---.+|.+..-...++.+++.+..|+ -++.-+++.=.|.|+-|+ +-....+..++ .
T Consensus 7 ~~~alL~laVf~~aa~GlvyElal~tLatyLlG~~Ilq~S~-----Iia~yl~amGlGs~~sry~~dd~~~~~Fv~vEll 81 (508)
T COG4262 7 RWRALLLLAVFVCAACGLVYELALGTLATYLLGGGILQTSL-----IIAGYLAAMGLGSLLSRYVLDDAALARFVDVELL 81 (508)
T ss_pred HHHHHHHHHHHHHHHhHHHHHHHHHHHHHHhcCCceeehHH-----HHHHHHHHhchhhhhhccccCchHHHHHHHHHHH
Confidence 45556666777777777899999999999999887766554 445556666677787777 33333323321 2
Q ss_pred HHHHHHHHHHHHHHHHhhcccccchhHHHHHHHHHHHHHHHHHHhhhhhhhhhhccceEEEecCCCChhhhhhhhhH---
Q 011118 93 QNLSFIVAGVSVITLLFFSSLKSTNFIAFVLLVILTNISGAVGVISTLAGTILIEREWVVVISEGHPPEALTKMNSI--- 169 (493)
Q Consensus 93 q~~~v~~s~~~~~~~l~~~~~~~~~~~~~~~l~~~~~~~g~~~~l~~~a~~iaieRDWvv~i~~~~~~~~L~~~Na~--- 169 (493)
-.+..+.|+.++++.+.. .+-+...++++.+ ..++.+-+.= + .-+.+||-+
T Consensus 82 lgligg~Sa~~ly~~FA~-----~~~~~~~Vly~lt---~vIG~LVG~E---------i---------PL~mrml~~r~a 135 (508)
T COG4262 82 LGLIGGVSAAALYLLFAL-----ESAPSRLVLYALT---AVIGVLVGAE---------I---------PLLMRMLQRRQA 135 (508)
T ss_pred HHHhccchHHHHHHHHHh-----ccchHHHHHHHHH---HHHHHHHhcc---------h---------HHHHHHHHHHHH
Confidence 223334555553322211 1111222233222 2233332211 1 122233322
Q ss_pred -----HHhHHHHHHhhhhHHHHHHHH-----hhhhHHHHHHHHHHHHHHHHHHHHHHHHH
Q 011118 170 -----IRRIDLTCKLLAPAITGFIIS-----FVSLQASAMTLAIWTTVTVWVEYWLFMSV 219 (493)
Q Consensus 170 -----mrriDl~~~l~gP~~~G~l~~-----~~s~~~a~~~i~~~n~~S~~ve~~~l~~V 219 (493)
-++.- .-+-+|.+.+|++.. ..|..-++...+..|.++-++..++++++
T Consensus 136 ~~k~~~s~vl-~~DYLGal~~gLl~p~lllP~LGl~rta~laG~~Nl~aAvv~~fllr~v 194 (508)
T COG4262 136 KAKDLGSRVL-TLDYLGALAGGLLWPFLLLPRLGLVRTAALAGLCNLAAAVVTLFLLRHV 194 (508)
T ss_pred HHHhhhhhhh-hhHhhhhhhHHHHHHHHHhhhhccHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 11111 114456666676654 36777777888899999999998888877
No 227
>COG2270 Permeases of the major facilitator superfamily [General function prediction only]
Probab=85.80 E-value=8.9 Score=41.04 Aligned_cols=158 Identities=17% Similarity=0.181 Sum_probs=93.2
Q ss_pred hHHHHHHHHHHHHHhhH-HHHHHHHHHHHHhCCCchHHHHHHHHHHHHHHHhhhccceeeecccchhHHHHHHHHHHHHH
Q 011118 18 LTTYLYVAHFLARWGAR-MWEFSVGLYMISVWPDSLLFAAIYGAVESASIALFGPIVGHWVDKLTYVKVLQIWLVTQNLS 96 (493)
Q Consensus 18 ~~~~L~~s~~lS~~Gdr-~~~Fa~~L~lv~l~~~sll~~sv~gl~~~l~~llfg~~vG~~vDr~~R~~v~~~~~~~q~~~ 96 (493)
+..++..+.++=+=|-. +..++ ..|.+..++=|-..+.+++...++..++.+...|.+-||.+-|+++...+
T Consensus 253 ~i~~FLiA~~~~~DGv~til~~~-~~fg~~~~gls~~~lll~g~~~~vvA~lg~ii~g~Ld~rfg~k~vl~~~l------ 325 (438)
T COG2270 253 NLVLFLIARFFYIDGVNTILAMG-GVFGAADLGLSSTELLLIGIALSVVAALGAIIAGFLDERFGSKPVLMIGL------ 325 (438)
T ss_pred chHHHHHHHHHHHhhHHHHHHHH-HHHHHHHcCccHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCceeehHHH------
Confidence 34444444444333322 23333 34456677778899999999999999999999998888887777766655
Q ss_pred HHHHHHHHHHHHhhcccccchhHHHHHHHHHHHHHHHHHHhhhhhhhhhhccceEEEecCCCChhhhhhhhhHHHhHHHH
Q 011118 97 FIVAGVSVITLLFFSSLKSTNFIAFVLLVILTNISGAVGVISTLAGTILIEREWVVVISEGHPPEALTKMNSIIRRIDLT 176 (493)
Q Consensus 97 v~~s~~~~~~~l~~~~~~~~~~~~~~~l~~~~~~~g~~~~l~~~a~~iaieRDWvv~i~~~~~~~~L~~~Na~mrriDl~ 176 (493)
+..+.++++..+.. ...+...+++++ ....| -.-+..|-+...++.+++ =.+.=....-.+..
T Consensus 326 vi~~~~~~~~~~~~---~~~~f~i~gll~--g~s~G---------~~qA~SRSy~~~lvp~~k---~~~fFglyaltgra 388 (438)
T COG2270 326 VILSIAALYLIFLE---GELDFWILGLLV--GTSLG---------GAQASSRSYLARLVPKGK---EGRFFGLYALTGRA 388 (438)
T ss_pred HHHHHHHHHHHHcc---ccHHHHHHHHHH--HHhcc---------hHHHHHHHHHHHhCCCcc---ccceeehhhhhhhH
Confidence 22333332332221 222222222222 11122 223335666777777654 24444455667889
Q ss_pred HHhhhhHHHHHHHHhhh-hHHHHH
Q 011118 177 CKLLAPAITGFIISFVS-LQASAM 199 (493)
Q Consensus 177 ~~l~gP~~~G~l~~~~s-~~~a~~ 199 (493)
+.++||.++|.+.+..| .+.+..
T Consensus 389 ~S~~gp~lv~v~t~iTg~~r~g~~ 412 (438)
T COG2270 389 ASFLGPFLVAVITQITGSSRAGVL 412 (438)
T ss_pred HHHHHHHHHHHHHHHhcchhhHHH
Confidence 99999999999988654 344443
No 228
>TIGR00769 AAA ADP/ATP carrier protein family. These proteins are members of the ATP:ADP Antiporter (AAA) Family (TC 2.A.12), which consists of nucleotide transporters that have 12 GES predicted transmembrane regions. One protein from Rickettsia prowazekii functions to take up ATP from the eukaryotic cell cytoplasm into the bacterium in exchange for ADP. Five AAA family paralogues are encoded within the genome of R. prowazekii. This organism transports UMP and GMP but not CMP, and it seems likely that one or more of the AAA family paralogues are responsible. The genome of Chlamydia trachomatis encodes two AAA family members, Npt1 and Npt2, which catalyse ATP/ADP exchange and GTP, CTP, ATP and UTP uptake probably employing a proton symport mechanism. Two homologous adenylate translocators of Arabidopsis thaliana are postulated to be localized to the intracellular plastid membrane where they function as ATP importers.
Probab=85.64 E-value=60 Score=35.45 Aligned_cols=187 Identities=10% Similarity=0.052 Sum_probs=98.0
Q ss_pred ccccceeeecccchHHHHHHHHHHHHhhh-hhhHHHHHHHHcCCCch----HHHHHHHHHHHHHHHHHHHHHHHHhhhch
Q 011118 283 CVGAWQVYLKQEVVLPGVSLALLFFTVLS-FGTLMTATLEWEGIPAY----IIGIARGISATIGIAATILYPILQSRIST 357 (493)
Q Consensus 283 ~~~g~~~y~~q~v~la~~alalLy~tVL~-f~~l~~~yl~~~gls~~----~iG~~r~~~av~GllgT~~~~~l~~riGl 357 (493)
+.||++..++.|.++....+.++|..+-. ....--..++++--++. ..|-+-..-.+.-+.--+..+++.||+|.
T Consensus 253 ~~es~k~i~~S~yL~~ia~~vi~y~~~~nlve~~~k~~v~~~~p~~~~~~~f~g~~~~~~gi~tl~~~l~~~~l~~~~Gw 332 (472)
T TIGR00769 253 TMESLKFLVSSPYILDLALLVIAYGISINLVEVTWKSKLKAQYPSPNEYSAFMGDFSTWTGVVSVTMMLLSGNVIRKYGW 332 (472)
T ss_pred HHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhH
Confidence 57899999999999998888888843322 33334444454443433 33443333222333334455999999998
Q ss_pred hhhhHHHHHHHHHHHHHHHHHH---hhcc-----------hHHHHHHHHH--HHHhhhchhhhh-hhhhhhhhhccCCCC
Q 011118 358 LRTGLWSIWSQWFCLLICVASI---WIHN-----------SLVAAYMLMV--GVATSRLGLWMF-DLSVIQQMQDLVPES 420 (493)
Q Consensus 358 ~r~g~~~~~~q~~~L~~~v~~~---~~~~-----------~~~s~~~l~~--gi~~SR~GLw~f-Dl~~~~l~Qe~vp~~ 420 (493)
.-+..+... +++..++..+ ..+. .+.....+++ -.+++|.+=+++ |.+- ++.=.-+|++
T Consensus 333 ~~~a~i~Pi---i~lit~~~Ff~~~~f~~~~~~~~~~l~~~pl~l~v~~g~~~~v~~k~~kYsl~dp~k-Emly~pld~e 408 (472)
T TIGR00769 333 LTAALITPL---VMLLTGVAFFSLIFFGGPAAPLVAKLGMTPLLLAVYVGAIQNILSKSTKYSLFDATK-EMAYIPLDEE 408 (472)
T ss_pred HHHHHHHHH---HHHHHHHHHHHHHHhcccchhhhhhhccChHHHHHHHHHHHHHHHHHhhhccccHHH-HHhcccCCHH
Confidence 766654443 2222211111 0010 1112233333 455677765543 5544 4444457888
Q ss_pred cchhHHHHHHHHHHhh--HHHHHHHHH---hccCCCCchHHHHHHHHHHHHHHHHHHHH
Q 011118 421 DRCVVGGVQNSLQSTM--DLMAYTMGI---IISNPQDFWKLILISVIVVTLAAILYTFH 474 (493)
Q Consensus 421 ~rG~v~gv~~sl~~~f--~l~~~~~~i---i~~~p~~F~~l~~~S~~~V~~~~~l~~~~ 474 (493)
+|.+.=++...+.+=. ..++.+-.. .+..- ......+..+..+.+..|++...
T Consensus 409 ~K~K~Ka~iD~v~~r~Gks~gs~i~~~l~~~~~~~-~~~~~~~~~i~~~i~~~Wi~~v~ 466 (472)
T TIGR00769 409 QKVKGKAAIDVVAARLGKSGGALIQQGLLVIFGSL-AASTPYLAVILLIIVTAWLAAAK 466 (472)
T ss_pred HHHHhHhhhhhhhhhhhhHHHHHHHHHHHHHHHHh-hhhhHHHHHHHHHHHHHHHHHHH
Confidence 8888777766665533 223332221 11111 13445555555566556666544
No 229
>KOG0255 consensus Synaptic vesicle transporter SVOP and related transporters (major facilitator superfamily) [General function prediction only]
Probab=84.71 E-value=16 Score=39.49 Aligned_cols=112 Identities=10% Similarity=0.053 Sum_probs=73.3
Q ss_pred CCCchHHHHHHHHHHHHHHHHHHHHHHHHhhhchhhhhHHHHHHHHHHHHHHHHHHhhcc-hHHHHHHHHHHHHhhhchh
Q 011118 324 GIPAYIIGIARGISATIGIAATILYPILQSRISTLRTGLWSIWSQWFCLLICVASIWIHN-SLVAAYMLMVGVATSRLGL 402 (493)
Q Consensus 324 gls~~~iG~~r~~~av~GllgT~~~~~l~~riGl~r~g~~~~~~q~~~L~~~v~~~~~~~-~~~s~~~l~~gi~~SR~GL 402 (493)
+.+.....+..++--+|-++|+++++.+..|+|-.++-+++...+.+|-.++ .+++. ....+.=++.|+..+..
T Consensus 114 c~~~~~~~~~~s~~~~G~~vG~~i~g~lsD~~GRk~~~~~~~~~~~i~~~~~---a~a~~~~~~~~~Rfl~G~~~~~~-- 188 (521)
T KOG0255|consen 114 CDSSTLVALGQSLFFLGVLVGSLIFGPLSDRFGRKPVLLVSLLLFIIFGILT---AFAPNYWMFLIFRFLSGFFGSGP-- 188 (521)
T ss_pred eCcHhHHHHHHHHHHHHHHHHHhhheehHhhcccHHHHHHHHHHHHHHHHHH---HHhCcHHHHHHHHHHHHhhccch--
Confidence 4456666666777777888999999999999998888888887555544332 22321 12233334444444333
Q ss_pred hhhhhhhhhhhhccCCCCcchhHHHHHHHHHHhhHHHHHHHH
Q 011118 403 WMFDLSVIQQMQDLVPESDRCVVGGVQNSLQSTMDLMAYTMG 444 (493)
Q Consensus 403 w~fDl~~~~l~Qe~vp~~~rG~v~gv~~sl~~~f~l~~~~~~ 444 (493)
..+...++=|.+++++|+.+... .......++....++
T Consensus 189 ---~~~~~~~~~E~~~~~~R~~~~~~-~~~~~~~~~~~~~~~ 226 (521)
T KOG0255|consen 189 ---LTVGFGLVAEIVSPKQRGLALTL-GGFFFVGGLMLPAGA 226 (521)
T ss_pred ---hHHhHhhheeecCcchhhHHHHH-HHHHHHHHHHHHHHH
Confidence 45555666799999999999999 666666644444444
No 230
>PTZ00207 hypothetical protein; Provisional
Probab=84.53 E-value=66 Score=36.14 Aligned_cols=150 Identities=9% Similarity=0.076 Sum_probs=72.9
Q ss_pred HHHHHHHHHHHhhH--HHHHHHHHHHHHhCCCchHHHHHHHHHHHHHHHhhhccceeeecccchhHHHHHHHHHHHHHHH
Q 011118 21 YLYVAHFLARWGAR--MWEFSVGLYMISVWPDSLLFAAIYGAVESASIALFGPIVGHWVDKLTYVKVLQIWLVTQNLSFI 98 (493)
Q Consensus 21 ~L~~s~~lS~~Gdr--~~~Fa~~L~lv~l~~~sll~~sv~gl~~~l~~llfg~~vG~~vDr~~R~~v~~~~~~~q~~~v~ 98 (493)
.+.++-.+.....- .|....|-+ ..-++-|....+....+. .....+..+.|.+.||++||+++.++.+.-.+.
T Consensus 29 ~lva~~~~~~~~g~~y~fsv~s~~L-~~~lgls~~~l~~i~svg-~~~g~~~lp~G~L~Dr~G~R~vllig~ll~~iG-- 104 (591)
T PTZ00207 29 LLVLGAFCSICTSFMYAFNLISGAM-QARYNLTQRDLSTITTVG-IAVGYFLLPYSFIYDYLGPRPIFVLSMTVFCLG-- 104 (591)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHH-HHHhCcCHHHHHHHHHHH-HHHHHHHHHHHHHHHHhCcHHHHHHHHHHHHHH--
Confidence 34444443333333 344444653 444554555555554432 233345667899999999999998886443333
Q ss_pred HHHHHHHHHHhhcccccchhHHHHHHHHHHHHHHHHHHhhhhhhhhhhccceEEEecCCCChhhhhhhhhHHHhHHHHHH
Q 011118 99 VAGVSVITLLFFSSLKSTNFIAFVLLVILTNISGAVGVISTLAGTILIEREWVVVISEGHPPEALTKMNSIIRRIDLTCK 178 (493)
Q Consensus 99 ~s~~~~~~~l~~~~~~~~~~~~~~~l~~~~~~~g~~~~l~~~a~~iaieRDWvv~i~~~~~~~~L~~~Na~mrriDl~~~ 178 (493)
+.. .. +..+.....+...+.+. -.+.|..+..+.++....+. +|.| ++| ..+.+.+...--++.
T Consensus 105 --~ll-~a-la~~~~i~~s~~~l~l~---r~l~G~G~~~~~~~~~~~i~-~~Fp----~~R----G~a~Gi~~~~~gLGs 168 (591)
T PTZ00207 105 --TLL-FA-LTFQEVIEGSVVRLSVY---NGLMTLGCMLFDLGAVVTVL-SVFP----SNR----GAVVAIMKTFTGLGS 168 (591)
T ss_pred --HHH-HH-HHhcccccCcHHHHHHH---HHHHHHHHHHHHHHHHHHHH-HhCh----hhh----HHHHHHHHHHHHHHH
Confidence 221 11 11101011121111111 12334444555555455543 3874 322 445555555544444
Q ss_pred -hhhhHHHHHHHH
Q 011118 179 -LLAPAITGFIIS 190 (493)
Q Consensus 179 -l~gP~~~G~l~~ 190 (493)
+.+|+..+++..
T Consensus 169 aI~~~l~~~l~~~ 181 (591)
T PTZ00207 169 AILGSIQLAFFSD 181 (591)
T ss_pred HHHHHHHHHHHHH
Confidence 467777766543
No 231
>PRK11462 putative transporter; Provisional
Probab=84.46 E-value=31 Score=37.00 Aligned_cols=118 Identities=12% Similarity=0.104 Sum_probs=74.2
Q ss_pred HHHHHHHcCCCchHHHHHHHHHHHHHHHHHHHHHHHHhhh----chhhhhHHHHHHHHHHHHHHHHHHh-hcc--hHHHH
Q 011118 316 MTATLEWEGIPAYIIGIARGISATIGIAATILYPILQSRI----STLRTGLWSIWSQWFCLLICVASIW-IHN--SLVAA 388 (493)
Q Consensus 316 ~~~yl~~~gls~~~iG~~r~~~av~GllgT~~~~~l~~ri----Gl~r~g~~~~~~q~~~L~~~v~~~~-~~~--~~~s~ 388 (493)
++-|....|+++..+|.+..++-+..-..--+.+.+..|. |-.|- |=++.- +.+..+....| .|. .....
T Consensus 33 ~~fyt~~~Gl~~~~~g~i~~~~ri~Dai~Dp~~G~~~D~t~~r~Gr~rp--~il~g~-i~~~i~~~llf~~p~~s~~~~~ 109 (460)
T PRK11462 33 MFFYTDIFGIPAGFVGTMFLVARALDAISDPCMGLLADRTRSRWGKFRP--WVLFGA-LPFGIVCVLAYSTPDLSMNGKM 109 (460)
T ss_pred HHHHHHhhCCCHHHHHHHHHHHHHHHHHHhhhheehhccCCCCCCCcch--hHhHHH-HHHHHHHHHHHhCCCCCcchHH
Confidence 3334345899999999999998888777777777776654 43332 212110 11222222233 331 11222
Q ss_pred HHHHHHHHhhhchhhhhhhhhhhhhhccCC-CCcchhHHHHHHHHHHhh
Q 011118 389 YMLMVGVATSRLGLWMFDLSVIQQMQDLVP-ESDRCVVGGVQNSLQSTM 436 (493)
Q Consensus 389 ~~l~~gi~~SR~GLw~fDl~~~~l~Qe~vp-~~~rG~v~gv~~sl~~~f 436 (493)
.-++...++-+++...+|+.-..+.=|..+ ++||++.++......+..
T Consensus 110 ~y~~~~~~~~~~~~t~~~ipy~al~~~lt~d~~eRt~l~s~r~~~~~iG 158 (460)
T PRK11462 110 IYAAITYTLLTLLYTVVNIPYCALGGVITNDPTQRISLQSWRFVLATAG 158 (460)
T ss_pred HHHHHHHHHHHHHHHHHhccHHHHHHHhcCCHHHHHHHHHHHHHHHHHH
Confidence 333444445588889999999999888885 779999999888777654
No 232
>PF00083 Sugar_tr: Sugar (and other) transporter; InterPro: IPR005828 Recent genome-sequencing data and a wealth of biochemical and molecular genetic investigations have revealed the occurrence of dozens of families of primary and secondary transporters. Two such families have been found to occur ubiquitously in all classifications of living organisms. These are the ATP-binding cassette (ABC) superfamily and the major facilitator superfamily (MFS), also called the uniporter-symporter-antiporter family. While ABC family permeases are in general multicomponent primary active transporters, capable of transporting both small molecules and macromolecules in response to ATP hydrolysis the MFS transporters are single-polypeptide secondary carriers capable only of transporting small solutes in response to chemiosmotic ion gradients. Although well over 100 families of transporters have now been recognised and classified, the ABC superfamily and MFS account for nearly half of the solute transporters encoded within the genomes of microorganisms. They are also prevalent in higher organisms. The importance of these two families of transport systems to living organisms can therefore not be overestimated []. The MFS was originally believed to function primarily in the uptake of sugars but subsequent studies revealed that drug efflux systems, Krebs cycle metabolites, organophosphate:phosphate exchangers, oligosaccharide:H1 symport permeases, and bacterial aromatic acid permeases were all members of the MFS. These observations led to the probability that the MFS is far more widespread in nature and far more diverse in function than had been thought previously. 17 subgroups of the MFS have been identified []. Evidence suggests that the MFS permeases arose by a tandem intragenic duplication event in the early prokaryotes. This event generated a 2-transmembrane-spanner (TMS) protein topology from a primordial 6-TMS unit. Surprisingly, all currently recognised MFS permeases retain the two six-TMS units within a single polypeptide chain, although in 3 of the 17 MFS families, an additional two TMSs are found []. Moreover, the well-conserved MFS specific motif between TMS2 and TMS3 and the related but less well conserved motif between TMS8 and TMS9 [] prove to be a characteristic of virtually all of the more than 300 MFS proteins identified.; GO: 0022857 transmembrane transporter activity, 0055085 transmembrane transport, 0016021 integral to membrane
Probab=84.06 E-value=0.046 Score=57.73 Aligned_cols=120 Identities=13% Similarity=0.139 Sum_probs=80.0
Q ss_pred CchHHHHHHHHHHHHHHHHHHHHHHHHhhhchhhhhHHHHHHHHHHHHHHHHHHhhcchHHHHHHHHHHHHhhhchhhhh
Q 011118 326 PAYIIGIARGISATIGIAATILYPILQSRISTLRTGLWSIWSQWFCLLICVASIWIHNSLVAAYMLMVGVATSRLGLWMF 405 (493)
Q Consensus 326 s~~~iG~~r~~~av~GllgT~~~~~l~~riGl~r~g~~~~~~q~~~L~~~v~~~~~~~~~~s~~~l~~gi~~SR~GLw~f 405 (493)
++...+...+...++.++|+++++.+..|+|-.++-..+... ....+++..+.+. ..+...+..+-.+..+|.=+.
T Consensus 44 ~~~~~~~~~~~~~~g~~~G~~~~g~~~d~~GRk~~~~~~~~~---~~i~~~~~~~~~~-~~~~~~~~~~R~~~G~~~g~~ 119 (451)
T PF00083_consen 44 SSLLSSLLTSSFFIGAIVGALIFGFLADRYGRKPALIISALL---MIIGSILIAFAPS-YNNFWMLLIGRFLIGFGIGGA 119 (451)
T ss_pred hHHHHHHHHHHHHhhhcccccccccccccccccccccccccc---ccccccccccccc-ccccccccccccccccccccc
Confidence 345678888888999999999999999999977766654431 1122222222221 123444555555555565566
Q ss_pred hhhhhhhhhccCCCCcchhHHHHHHHHHHhhHHHHHHHHHhccC
Q 011118 406 DLSVIQQMQDLVPESDRCVVGGVQNSLQSTMDLMAYTMGIIISN 449 (493)
Q Consensus 406 Dl~~~~l~Qe~vp~~~rG~v~gv~~sl~~~f~l~~~~~~ii~~~ 449 (493)
......+++|..|+++||+..+.+.....+-.+.....+.....
T Consensus 120 ~~~~~~~~~E~~~~~~R~~~~~~~~~~~~~G~~~~~~~~~~~~~ 163 (451)
T PF00083_consen 120 YVVSPIYISEIAPPKHRGFLSSLFQLFWALGILLASLIGYIVSY 163 (451)
T ss_pred cccccccccccccccccccccccccccccccccccccccccccc
Confidence 78888999999999999999887776665555555555544443
No 233
>TIGR00926 2A1704 Peptide:H+ symporter (also transports b-lactam antibiotics, the antitumor agent, bestatin, and various protease inhibitors).
Probab=83.49 E-value=22 Score=40.43 Aligned_cols=52 Identities=10% Similarity=0.084 Sum_probs=35.8
Q ss_pred hhhHHHHHHHH-cCCCch----HHHHHHHHHHHHHHHHHHHHHHHHhhhchhhhhHHHHH
Q 011118 312 FGTLMTATLEW-EGIPAY----IIGIARGISATIGIAATILYPILQSRISTLRTGLWSIW 366 (493)
Q Consensus 312 f~~l~~~yl~~-~gls~~----~iG~~r~~~av~GllgT~~~~~l~~riGl~r~g~~~~~ 366 (493)
.-.+++.|+.+ .|+++. ..+.+-+.+-+.+++|++++ -+++|-.|+..++..
T Consensus 6 m~aiLvlYl~~~lg~~~~~A~~i~~~f~~l~yl~pilGg~iA---D~~lG~~~tIl~~~i 62 (654)
T TIGR00926 6 MRTILVLYFLNFLGFSESTSTVLFHTFTYLCYLTPLIGAIIA---DGWLGKFKTILYLSI 62 (654)
T ss_pred cHHHHHHHHHHHcCCcHHHHHHHHHHHHHHHHHHHHHHHHHH---HHHhhhHHHHHHHHH
Confidence 34566667663 677654 67777788888888888887 466777777666554
No 234
>KOG1330 consensus Sugar transporter/spinster transmembrane protein [Carbohydrate transport and metabolism]
Probab=83.01 E-value=1.5 Score=47.36 Aligned_cols=107 Identities=17% Similarity=0.148 Sum_probs=76.1
Q ss_pred cCCCchHHHHHHHHHHHHHHHHHHHHHHHHhhhchhhhhHHHHHHHHHHHHHHHHHHhhcchHHHHHHHHHHHHhhhchh
Q 011118 323 EGIPAYIIGIARGISATIGIAATILYPILQSRISTLRTGLWSIWSQWFCLLICVASIWIHNSLVAAYMLMVGVATSRLGL 402 (493)
Q Consensus 323 ~gls~~~iG~~r~~~av~GllgT~~~~~l~~riGl~r~g~~~~~~q~~~L~~~v~~~~~~~~~~s~~~l~~gi~~SR~GL 402 (493)
-+++++..|++...=-+.=.++.-+++.|.+|++-.+....++. ++..+..++-+. .- .+.++..=.+-.+|.
T Consensus 63 fni~~s~~Gll~~vf~v~~~i~sPl~gyLadryNR~~v~~vG~~---iW~~Av~~~~fs-~~---Fwq~~l~R~~vGiGe 135 (493)
T KOG1330|consen 63 FNISDSELGLLQTVFIVVFMIASPLFGYLADRYNRKRVIAVGIF---IWTLAVFASGFS-NH---FWQVLLCRGFVGIGE 135 (493)
T ss_pred cCCCchhccchhHHHHHHHHHHHHHHHHHHhhcCcceEEeeHHH---HHHHHHHHHHHH-HH---HHHHHHHHHHhccch
Confidence 68899999999998888888999999999999997665554443 122221121111 11 122223333446899
Q ss_pred hhhhhhhhhhhhccCCCCcchhHHHHHHHHHHhh
Q 011118 403 WMFDLSVIQQMQDLVPESDRCVVGGVQNSLQSTM 436 (493)
Q Consensus 403 w~fDl~~~~l~Qe~vp~~~rG~v~gv~~sl~~~f 436 (493)
=+|....++++-+..|+++|+++.++.+---..-
T Consensus 136 As~~~ia~s~IaD~f~~~~Rs~~~~ify~~ipvG 169 (493)
T KOG1330|consen 136 ASYSPIAPSLIADSFPDDKRSRVLGIFYFAIPVG 169 (493)
T ss_pred hhhcccchhHhhhcCcchhhhHHHHHhhhhcccc
Confidence 9999999999999999999999999877655544
No 235
>KOG3762 consensus Predicted transporter [General function prediction only]
Probab=82.25 E-value=6.4 Score=43.45 Aligned_cols=140 Identities=12% Similarity=0.149 Sum_probs=93.6
Q ss_pred HHHHHHHHcCCCchHHHHHHHHHHHHHHHHHHHHHHHHhhhchhhhhHHHHHHHHHHHHHH--HHHHhhcchHHHH--HH
Q 011118 315 LMTATLEWEGIPAYIIGIARGISATIGIAATILYPILQSRISTLRTGLWSIWSQWFCLLIC--VASIWIHNSLVAA--YM 390 (493)
Q Consensus 315 l~~~yl~~~gls~~~iG~~r~~~av~GllgT~~~~~l~~riGl~r~g~~~~~~q~~~L~~~--v~~~~~~~~~~s~--~~ 390 (493)
.|.=++++.|-.+..-|+.-..+=++++..=+...++.|++|-+|....++. |...= ..|.+- .+|.+ .=
T Consensus 393 FLfWHled~~~~~~LfGv~~a~~~~gEI~~~ffs~klI~kiGHv~v~~lgLa----~~~~Rf~~~S~L~--n~W~vLPie 466 (618)
T KOG3762|consen 393 FLFWHLEDLGGIKTLFGVVSALCHAGEILFYFFSFKLIEKIGHVNVMYLGLA----CNVGRFLYYSYLQ--NPWMVLPIE 466 (618)
T ss_pred HHHHHHhhcCCcceeeeehhhhhccchHHHHHHHHHHHHHhcccceeeehhh----HHHHHHHHHHHhc--CchheeeHH
Confidence 3555677788899999999999999999999999999999998876554432 22211 111111 11111 11
Q ss_pred HHHHHHhhhchhhhhhhhhhhhhhccCCCCcchhHHHHHHHHHHhh--HHHHHHHHHhccCCCCchHHHHHHHHHHH
Q 011118 391 LMVGVATSRLGLWMFDLSVIQQMQDLVPESDRCVVGGVQNSLQSTM--DLMAYTMGIIISNPQDFWKLILISVIVVT 465 (493)
Q Consensus 391 l~~gi~~SR~GLw~fDl~~~~l~Qe~vp~~~rG~v~gv~~sl~~~f--~l~~~~~~ii~~~p~~F~~l~~~S~~~V~ 465 (493)
++-|+...- +| -+..+++-...|++.|-.+.|+....-.+. .+++++.|.+..+-+....-.+..+++++
T Consensus 467 ilqgit~al--iW---aa~~sY~s~vaPp~l~at~Q~l~~g~f~GlG~g~GslIGG~~v~~fg~~ttf~~~giAcl~ 538 (618)
T KOG3762|consen 467 ILQGITHAL--IW---AAIISYASHVAPPGLRATAQGLLQGIFHGLGKGLGSLIGGFVVERFGARTTFRIFGIACLV 538 (618)
T ss_pred HHHHHHHHH--HH---HHHHHHHHhhCCCcchHHHHHHHHHHhcccCcchhhhhhhhhheeehhHHHHHHHHHHHHH
Confidence 222222111 23 466677788899999988888777776666 89999999999886666666655555554
No 236
>PF03825 Nuc_H_symport: Nucleoside H+ symporter
Probab=81.71 E-value=76 Score=33.65 Aligned_cols=54 Identities=20% Similarity=0.343 Sum_probs=45.5
Q ss_pred HHHHhh-hhhhHHHHHHHHcCCCchHHHHHHHHHHHHHHHHHHHHHHHHhhhchh
Q 011118 305 LFFTVL-SFGTLMTATLEWEGIPAYIIGIARGISATIGIAATILYPILQSRISTL 358 (493)
Q Consensus 305 Ly~tVL-~f~~l~~~yl~~~gls~~~iG~~r~~~av~GllgT~~~~~l~~riGl~ 358 (493)
+|+.+. .+-+.+..|+++.|+++.++|++.+++.+..+.+....+.+..|.+..
T Consensus 13 ~~f~~~G~~~p~~~~~L~~~G~s~~qIG~l~a~~~~~~i~~~~~~g~~aDr~~~~ 67 (400)
T PF03825_consen 13 LYFFAYGAFLPYLPLYLESRGFSGTQIGILLAVGPLARIVSPPFWGAIADRFGSA 67 (400)
T ss_pred HHHHHHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhHhhhH
Confidence 333443 366678899999999999999999999999999999999999998643
No 237
>KOG3626 consensus Organic anion transporter [Secondary metabolites biosynthesis, transport and catabolism]
Probab=78.43 E-value=19 Score=41.22 Aligned_cols=79 Identities=15% Similarity=0.140 Sum_probs=62.1
Q ss_pred eeeecccchHHHHHHHHHHHH-hhhhhhHHHHHHHH-cCCCchHHHHHHHHHHHHHH-HHHHHHHHHHhhhchh--hhhH
Q 011118 288 QVYLKQEVVLPGVSLALLFFT-VLSFGTLMTATLEW-EGIPAYIIGIARGISATIGI-AATILYPILQSRISTL--RTGL 362 (493)
Q Consensus 288 ~~y~~q~v~la~~alalLy~t-VL~f~~l~~~yl~~-~gls~~~iG~~r~~~av~Gl-lgT~~~~~l~~riGl~--r~g~ 362 (493)
+-.+++|+|.-.......+.. +-|+.+.+.-|+.+ -|++++.--.+.|.-++.+. +|.++.+++.||+.+. .+..
T Consensus 386 ~~ll~N~if~~~~l~~~~~~~~~~G~~tFlPKyLE~Qfg~sas~An~l~G~i~vp~~~~Gi~lGG~iikkfkl~~r~~a~ 465 (735)
T KOG3626|consen 386 KRLLSNPIFMLVVLASVIESLAITGYITFLPKYLETQFGISASLANILTGSIGVPAAAVGIFLGGLIIKKFKLSARGAAK 465 (735)
T ss_pred HHHhcCchHHHHHHHHHHHHHHHhhHHHhhHHHHHHHcCCCHHHHHHHhhhhhhhhhhhhhhccceeeeeecccHHHHHH
Confidence 334689999988888888855 46899999999996 69999999988877666655 8999999999999874 3444
Q ss_pred HHHH
Q 011118 363 WSIW 366 (493)
Q Consensus 363 ~~~~ 366 (493)
|.++
T Consensus 466 ~~~~ 469 (735)
T KOG3626|consen 466 FVIV 469 (735)
T ss_pred HHHH
Confidence 4443
No 238
>KOG0252 consensus Inorganic phosphate transporter [Inorganic ion transport and metabolism]
Probab=77.90 E-value=10 Score=41.22 Aligned_cols=167 Identities=14% Similarity=0.065 Sum_probs=101.4
Q ss_pred HhhhhhhHHHHHHHHcC------CCchHHHHHHHHHHHHHHHHHHHHHHHHhhhchhhhhHHHHHHHHHHHHHHHHHHhh
Q 011118 308 TVLSFGTLMTATLEWEG------IPAYIIGIARGISATIGIAATILYPILQSRISTLRTGLWSIWSQWFCLLICVASIWI 381 (493)
Q Consensus 308 tVL~f~~l~~~yl~~~g------ls~~~iG~~r~~~av~GllgT~~~~~l~~riGl~r~g~~~~~~q~~~L~~~v~~~~~ 381 (493)
+..+.-+-+..|++++| +++...+..-++.-++=+.|=+.++++..++|-.|.....+..-.+|-..+.++.-.
T Consensus 58 F~I~lVt~il~~lY~~~~~~~g~~ps~i~~~Vn~~A~vGti~GQl~FG~lgD~~GRK~vYG~~liImIi~t~~~~~s~~~ 137 (538)
T KOG0252|consen 58 FSISLVTKILGYLYYHGDESGGHYPSGVLALVNAAALVGTIFGQLFFGWLGDKFGRKKVYGKELIIMIICSALSGLSVGT 137 (538)
T ss_pred hhHHHHHHHHHHHhcCCCCCCCcCCchHHHHHHHHHHHHHHHHHHHHHHHHhhhcchhhhhHHHHHHHHHHHHhccCCCC
Confidence 44555667888999755 578889999999999999999999999999997665544333222333322222222
Q ss_pred cchHHHHHHHHHHHHhhhchhhhhhhhhhhhhhccCCCCcchhHHHHHHHHHHhhHHHHHHHHHhc--------cCCC--
Q 011118 382 HNSLVAAYMLMVGVATSRLGLWMFDLSVIQQMQDLVPESDRCVVGGVQNSLQSTMDLMAYTMGIII--------SNPQ-- 451 (493)
Q Consensus 382 ~~~~~s~~~l~~gi~~SR~GLw~fDl~~~~l~Qe~vp~~~rG~v~gv~~sl~~~f~l~~~~~~ii~--------~~p~-- 451 (493)
+++.--...+..-=.+=.+|.=+=-.....+.-|.--+..||..-+...++|.+--+...+.+++. +.|+
T Consensus 138 ~~~~~~m~~L~~~R~~LGiGIGGDYPlSAtI~SE~an~~~RGa~iaavFa~Qg~GilaG~ivt~Iv~~~fe~~~~~~~~~ 217 (538)
T KOG0252|consen 138 TSPLGVMMTLCFFRFLLGIGIGGDYPLSATIMSESANKKTRGAFIAAVFAMQGFGILAGGIVALIVSAIFEKIFNGPSTY 217 (538)
T ss_pred CCCcchhhHHHHHHHHhhccccCCCcchHHHhhhhhhhccccceeEEEEEecchhHhhccHHHHHHHHHHhccCCCCCCc
Confidence 222011111111111112344444477788888999999999999988888877744444444332 2221
Q ss_pred ---CchHHHHHHHHHHHHHHHHHHHH
Q 011118 452 ---DFWKLILISVIVVTLAAILYTFH 474 (493)
Q Consensus 452 ---~F~~l~~~S~~~V~~~~~l~~~~ 474 (493)
+--|-.++.+++|-+...+|...
T Consensus 218 ~~ld~vWRl~~glg~vpa~~~ly~Rl 243 (538)
T KOG0252|consen 218 PHLDGVWRIIFGLGAVPALLVLYFRL 243 (538)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHhhh
Confidence 22355666677777666666544
No 239
>PF12832 MFS_1_like: MFS_1 like family
Probab=76.18 E-value=3.6 Score=33.21 Aligned_cols=48 Identities=25% Similarity=0.195 Sum_probs=39.1
Q ss_pred HHHHHHhCCCchHHHHHHHHHHHHHHHhhhccceeeecccchhHHHHHH
Q 011118 41 GLYMISVWPDSLLFAAIYGAVESASIALFGPIVGHWVDKLTYVKVLQIW 89 (493)
Q Consensus 41 ~L~lv~l~~~sll~~sv~gl~~~l~~llfg~~vG~~vDr~~R~~v~~~~ 89 (493)
|+++-+ .+=|...+++...+..+..++..|..|..+||.+|+|.+...
T Consensus 24 ~~~~~~-~Gl~~~~iGil~~i~~~~~~~~~pl~g~laDk~~~~~~~l~~ 71 (77)
T PF12832_consen 24 PLYLKQ-LGLSPSQIGILSAIRPLIRFLAPPLWGFLADKFGKRKVILLG 71 (77)
T ss_pred hHhhhh-cCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCccHHHHHH
Confidence 344443 455889999999999999999999999999999888876544
No 240
>PF03219 TLC: TLC ATP/ADP transporter; InterPro: IPR004667 These proteins are members of the ATP:ADP Antiporter (AAA) family, which consists of nucleotide transporters that have 12 GES predicted transmembrane regions. One protein from Rickettsia prowazekii functions to take up ATP from the eukaryotic cell cytoplasm into the bacterium in exchange for ADP. Five AAA family paralogues are encoded within the genome of R. prowazekii. This organism transports UMP and GMP but not CMP, and it seems likely that one or more of the AAA family paralogues are responsible. The genome of Chlamydia trachomatis encodes two AAA family members, Npt1 and Npt2, which catalyse ATP/ADP exchange and GTP, CTP, ATP and UTP uptake probably employing a proton symport mechanism. Two homologous adenylate translocators of Arabidopsis thaliana are postulated to be localized to the intracellular plastid membrane where they function as ATP importers.; GO: 0005471 ATP:ADP antiporter activity, 0005524 ATP binding, 0006810 transport, 0016021 integral to membrane
Probab=75.99 E-value=1.3e+02 Score=33.06 Aligned_cols=82 Identities=12% Similarity=0.017 Sum_probs=51.5
Q ss_pred ccccceeeecccchHHHHHHHHHHH-HhhhhhhHHHHHHHHcCCCchHH----HHHHH-HHHHHHHHHHHHHHHHHhhhc
Q 011118 283 CVGAWQVYLKQEVVLPGVSLALLFF-TVLSFGTLMTATLEWEGIPAYII----GIARG-ISATIGIAATILYPILQSRIS 356 (493)
Q Consensus 283 ~~~g~~~y~~q~v~la~~alalLy~-tVL~f~~l~~~yl~~~gls~~~i----G~~r~-~~av~GllgT~~~~~l~~riG 356 (493)
+.|+++...++|.++....+++.|. +.--.+...-..++.+-=++..+ |-+.. .|.++.++. ++++++.||+|
T Consensus 269 ~~es~k~l~kS~yL~~Ia~lvi~Ygi~inLvE~~wK~~lk~~~~~~~~ysafmG~~~~~tGivtii~~-~l~~~iir~~G 347 (491)
T PF03219_consen 269 LKESFKLLLKSKYLLCIALLVIAYGISINLVEVVWKSQLKQLYPDPNDYSAFMGKFSSWTGIVTIIMM-FLSSNIIRRFG 347 (491)
T ss_pred HHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCchHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHhh
Confidence 5788899999999999999999994 33235555555555433333332 22222 233333333 77788899999
Q ss_pred hhhhhHHHH
Q 011118 357 TLRTGLWSI 365 (493)
Q Consensus 357 l~r~g~~~~ 365 (493)
-..+..+..
T Consensus 348 W~~~AlitP 356 (491)
T PF03219_consen 348 WRTAALITP 356 (491)
T ss_pred HHHHHHHhH
Confidence 776665544
No 241
>KOG2504 consensus Monocarboxylate transporter [Carbohydrate transport and metabolism]
Probab=73.88 E-value=53 Score=36.12 Aligned_cols=147 Identities=19% Similarity=0.155 Sum_probs=94.6
Q ss_pred hhhhhHHHHHHHHcCCCchHHHHHHHHHHHHHHHHHHHHHHHHhhhchhhhhHHHHHHHHHHHHHHHHHHhhcchHHHHH
Q 011118 310 LSFGTLMTATLEWEGIPAYIIGIARGISATIGIAATILYPILQSRISTLRTGLWSIWSQWFCLLICVASIWIHNSLVAAY 389 (493)
Q Consensus 310 L~f~~l~~~yl~~~gls~~~iG~~r~~~av~GllgT~~~~~l~~riGl~r~g~~~~~~q~~~L~~~v~~~~~~~~~~s~~ 389 (493)
-+|+-+...+..+.+-+.+++++.-++-.-..+...-+...+.+|+|...+.+.+.. ++....+++.|.. +.+-.+
T Consensus 63 ~~~Gv~~~~~~~~f~~s~~~~~~i~sl~~~~~~~~gpl~s~l~~rfg~R~v~i~G~~---v~~~g~~lssF~~-~i~~l~ 138 (509)
T KOG2504|consen 63 NSFGLLFEELMDYFGSSSSQIAWIGSLLLGVYLLAGPLVSALCNRFGCRTVMIAGGL---VAALGLLLSSFAT-SLWQLY 138 (509)
T ss_pred heehhhHHHHHHHhCCCccHHHHHHHHHHHHHHHhccHHHHHHhhcCchHHHHHHHH---HHHHHHHHHHHHh-hHHHHH
Confidence 346534444444688888889998888888888888888999999998887777665 4445555555553 233332
Q ss_pred HHHHHHHhhhchhhhhhhhhhhhhhccCCCCcchhHHHHHHHHHHhh-HHHHHHHHHhccCCCCchHHHHHHHHH
Q 011118 390 MLMVGVATSRLGLWMFDLSVIQQMQDLVPESDRCVVGGVQNSLQSTM-DLMAYTMGIIISNPQDFWKLILISVIV 463 (493)
Q Consensus 390 ~l~~gi~~SR~GLw~fDl~~~~l~Qe~vp~~~rG~v~gv~~sl~~~f-~l~~~~~~ii~~~p~~F~~l~~~S~~~ 463 (493)
+ ..|+ ...+|+=+-=.....++. .--+++|+.++|+-.+=.... -+...+...+....+-++.+.+.....
T Consensus 139 l-t~gv-i~G~G~~~~~~paiviv~-~YF~kkR~lA~Gia~~GsG~G~~~~~~l~~~l~~~~G~r~~~l~~~~~~ 210 (509)
T KOG2504|consen 139 L-TFGV-IGGLGLGLIYLPAVVILG-TYFEKKRALATGIAVSGTGVGTVVFPPLLKYLLSKYGWRGALLIFGGIS 210 (509)
T ss_pred H-HHHH-Hhhccchhhhcchhhhhh-hHhHHHHHHHHhhhhccCCcceeeHHHHHHHHHHHhCcHHHHHHHHHHH
Confidence 2 2222 334444322333333333 457789999999888766665 555666666667777777776666655
No 242
>PRK03612 spermidine synthase; Provisional
Probab=72.50 E-value=1.6e+02 Score=32.52 Aligned_cols=174 Identities=16% Similarity=0.144 Sum_probs=90.2
Q ss_pred hHHHHHHHHHHHHHhhHHHHHHHHHHHHHhCCCchHHHHHHHHHHHHHHHhhhccceeeecccchhHHHHHHHHHHHHHH
Q 011118 18 LTTYLYVAHFLARWGARMWEFSVGLYMISVWPDSLLFAAIYGAVESASIALFGPIVGHWVDKLTYVKVLQIWLVTQNLSF 97 (493)
Q Consensus 18 ~~~~L~~s~~lS~~Gdr~~~Fa~~L~lv~l~~~sll~~sv~gl~~~l~~llfg~~vG~~vDr~~R~~v~~~~~~~q~~~v 97 (493)
..+.++..-++|-.-.=++|..+.=.+...+.+| +|.+...++..++|..+|.|.=+.-+++..+.-...+...
T Consensus 15 ~~~~l~~~~f~sg~~~L~yEv~~~r~l~~~~G~s-----~~~~~~ii~~fl~glalGs~l~~~~~~~~~~~~~~~e~~i- 88 (521)
T PRK03612 15 DRALLLAAVFVCAACGLVYELLLGTLASYLLGDS-----VTQFSTVIGLMLFAMGVGALLSKYLLRDAAAGFVAVELLL- 88 (521)
T ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCch-----HHHHHHHHHHHHHHHHHHHHHHHhhhhhHHHHHHHHHHHH-
Confidence 4467888888999989999999998888887755 4555566666666666666554321122222222222222
Q ss_pred HHHHHHHHHHHhhcccccc--hhHHHHHHHHHHHHHHHHHHhhhhhhhhhhccceEEEecCCCChhhhhhhhhHHHhHHH
Q 011118 98 IVAGVSVITLLFFSSLKST--NFIAFVLLVILTNISGAVGVISTLAGTILIEREWVVVISEGHPPEALTKMNSIIRRIDL 175 (493)
Q Consensus 98 ~~s~~~~~~~l~~~~~~~~--~~~~~~~l~~~~~~~g~~~~l~~~a~~iaieRDWvv~i~~~~~~~~L~~~Na~mrriDl 175 (493)
++.+.+...++........ ....+..+++.+++.|.. +-....+. .+.+.++..+.=+++=..|.
T Consensus 89 ~l~~~~~~~ll~~~~~~~~~~~~~~~~~~~~~~~l~G~~---~Pl~~~~~----------~~~~~~~~g~~~g~ly~~nt 155 (521)
T PRK03612 89 ALLGGLSALILYAAFAFQGLSRLLLYVLVLLIGLLIGME---IPLLMRIL----------QRIRDQHLGHNVATVLAADY 155 (521)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH---HHHHHHHH----------HhccccchhhhhhhhHhHHh
Confidence 2211111111110000000 111122222222222222 11111111 11110123344467778899
Q ss_pred HHHhhhhHHHHHHHH-hhhhHHHHHHHHHHHHHHHH
Q 011118 176 TCKLLAPAITGFIIS-FVSLQASAMTLAIWTTVTVW 210 (493)
Q Consensus 176 ~~~l~gP~~~G~l~~-~~s~~~a~~~i~~~n~~S~~ 210 (493)
+..++|+++.|+++= .+|...+...+++.|++.-+
T Consensus 156 lGa~~G~l~~~~vLlp~lG~~~t~~~~a~l~~~~a~ 191 (521)
T PRK03612 156 LGALVGGLAFPFLLLPRLGLIRTAALTGSLNLLAAL 191 (521)
T ss_pred HHHHHHHHHHHHHHHHhcchHHHHHHHHHHHHHHHH
Confidence 999999999998865 78877777777777865543
No 243
>PF06779 DUF1228: Protein of unknown function (DUF1228); InterPro: IPR010645 This entry represents the N terminus of several putative bacterial membrane proteins, which may be sugar transporters. Note that many members are hypothetical proteins.
Probab=70.40 E-value=41 Score=27.82 Aligned_cols=56 Identities=11% Similarity=0.006 Sum_probs=45.2
Q ss_pred hhhhHHHHHHHHcCCCchHHHHHHHHHHHHHHHHHHHHHHHHhhhchhhhhHHHHH
Q 011118 311 SFGTLMTATLEWEGIPAYIIGIARGISATIGIAATILYPILQSRISTLRTGLWSIW 366 (493)
Q Consensus 311 ~f~~l~~~yl~~~gls~~~iG~~r~~~av~GllgT~~~~~l~~riGl~r~g~~~~~ 366 (493)
.|..+++.-..+.++|+.+-|.+-++-.++=++|++...++.++.+..|.-..+++
T Consensus 10 ayTplLP~M~~~~~ls~~~ag~lasaNy~GYL~GAl~~~~~~~~~~~~~~~~~~l~ 65 (85)
T PF06779_consen 10 AYTPLLPLMQADGGLSLSQAGWLASANYLGYLVGALLASRLPRHSRPRRLLRAGLL 65 (85)
T ss_pred HHHhHhHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhcccHHHHHHHHHH
Confidence 45666776666899999999999999999999999999999988665555554443
No 244
>KOG2325 consensus Predicted transporter/transmembrane protein [General function prediction only]
Probab=69.15 E-value=68 Score=35.19 Aligned_cols=176 Identities=10% Similarity=0.075 Sum_probs=101.1
Q ss_pred HHHHHHHHHHHHhh-hhhhHHHHHHHH--cCCCchHHHHHHHHHHHHHHHHHHHHHHHHhhhchhhhhHHHHHHHHHHHH
Q 011118 297 LPGVSLALLFFTVL-SFGTLMTATLEW--EGIPAYIIGIARGISATIGIAATILYPILQSRISTLRTGLWSIWSQWFCLL 373 (493)
Q Consensus 297 la~~alalLy~tVL-~f~~l~~~yl~~--~gls~~~iG~~r~~~av~GllgT~~~~~l~~riGl~r~g~~~~~~q~~~L~ 373 (493)
+-....++++..-. -+...|-.|+++ .|-++...|+.-++++++=..+..+++....|-+-+|--++-.. .++..
T Consensus 37 ~l~~~~sfl~~v~~sI~~~s~wpYl~~lD~~A~~~ffG~viaa~slg~~i~~liF~~Ws~k~~~~k~Pli~s~--ii~~~ 114 (488)
T KOG2325|consen 37 YLALLNSFLVAVQFSIYLTSMWPYLQKLDPTATATFFGLVIAASSLGHAIFSLIFGIWSNKTGSVKKPLIVSF--LIAII 114 (488)
T ss_pred HHHHHHHHHHhhhheEEEeecchhhhhcCCCCCcchhhHHHHHHHHHHHhcchhhcccccccCCcccCHHHHH--HHHHH
Confidence 33444455553222 245578889997 88899999999999999999999999999999986554332221 12333
Q ss_pred HHHHHHhhc-chHHHHHHHHHHHHhhhchhhhhhhhhhhhhhccCCCCcchhHHHHHH--HHHHhh-HHHHHHHHHhc-c
Q 011118 374 ICVASIWIH-NSLVAAYMLMVGVATSRLGLWMFDLSVIQQMQDLVPESDRCVVGGVQN--SLQSTM-DLMAYTMGIII-S 448 (493)
Q Consensus 374 ~~v~~~~~~-~~~~s~~~l~~gi~~SR~GLw~fDl~~~~l~Qe~vp~~~rG~v~gv~~--sl~~~f-~l~~~~~~ii~-~ 448 (493)
.++.=.... -+.-..++++.+=++..+|--.+-+.=.-+--...+++++-.+.++-. .+.... |.+...++-+. +
T Consensus 115 g~llY~~l~~~~~~~~y~mL~~R~l~Gvg~~n~a~lR~Y~a~~s~~~dR~rA~a~~~~~~vlg~ilGp~~q~~f~~Lg~~ 194 (488)
T KOG2325|consen 115 GNLLYLALAYVPNGVKYLMLVARILTGVGVGNFAVLRAYIADASTVEDRPRAFAATSGGFVLGIILGPTIQLAFTPLGEK 194 (488)
T ss_pred HHHHHHHHHhcccchHHHHHHHHHHcCcCcccHHHHHHHHHhccCccchHHHHHHhhhHHHHHHHHhHHHHHHHhhhcCC
Confidence 333321111 112267777888777777766444443333334456666656666555 333333 44444443332 2
Q ss_pred --------CCCCchHHHHHHHHHHHHHHHHHHHH
Q 011118 449 --------NPQDFWKLILISVIVVTLAAILYTFH 474 (493)
Q Consensus 449 --------~p~~F~~l~~~S~~~V~~~~~l~~~~ 474 (493)
.-+++...+++++..-.....+...+
T Consensus 195 G~~i~~~~~~n~YTap~w~m~i~~i~~~v~i~~~ 228 (488)
T KOG2325|consen 195 GFMILPGLIFNMYTAPAWLMAILWIIYIVIILFF 228 (488)
T ss_pred ceEEcCcceEEecchHHHHHHHHHHHHHHHHHhh
Confidence 22445555555555444444333333
No 245
>COG2211 MelB Na+/melibiose symporter and related transporters [Carbohydrate transport and metabolism]
Probab=65.32 E-value=82 Score=34.35 Aligned_cols=154 Identities=14% Similarity=0.106 Sum_probs=93.9
Q ss_pred HHHHcCCCchHHHHHHHHHHHHHHHHHHHHHHHHhhhchhhhhH---HHHHHHHHHHHHHHHHHhhcch---HHHHHHHH
Q 011118 319 TLEWEGIPAYIIGIARGISATIGIAATILYPILQSRISTLRTGL---WSIWSQWFCLLICVASIWIHNS---LVAAYMLM 392 (493)
Q Consensus 319 yl~~~gls~~~iG~~r~~~av~GllgT~~~~~l~~riGl~r~g~---~~~~~q~~~L~~~v~~~~~~~~---~~s~~~l~ 392 (493)
|-.-.|+|+...|.+..+.=+.=-..--+.+.+..|-. .|-|- |-++.-.-+-+.+++.++.|.. .-..+.++
T Consensus 39 YTdv~Gis~~~aG~iflv~RiiDAi~DP~~G~i~D~t~-~r~GrfRP~lL~g~ip~~i~~~l~F~~p~~~~~~k~~ya~v 117 (467)
T COG2211 39 YTDVFGLSAALAGTIFLVARIIDAITDPIMGFIVDRTR-SRWGRFRPWLLWGAIPFAIVAVLLFITPDFSMTGKLIYALV 117 (467)
T ss_pred HhcccCCcHHHHHHHHHHHHHHHHHhcchheeeecccc-cccccccHHHHHHhHHHHHHHHHHHcCCCcccCcchHHHHH
Confidence 33358999999999998876666555555555555444 22222 2222101122233333334421 11223333
Q ss_pred HHHHhhhchhhhhhhhhhhhhhccC-CCCcchhHHHHHHHHHHhhHHH-H----HHHHHhccCCCCchHHHHHHHHHHHH
Q 011118 393 VGVATSRLGLWMFDLSVIQQMQDLV-PESDRCVVGGVQNSLQSTMDLM-A----YTMGIIISNPQDFWKLILISVIVVTL 466 (493)
Q Consensus 393 ~gi~~SR~GLw~fDl~~~~l~Qe~v-p~~~rG~v~gv~~sl~~~f~l~-~----~~~~ii~~~p~~F~~l~~~S~~~V~~ 466 (493)
..+. -.++-.+.|+--.++.=|.+ +++||-+.++..+...++..++ . .+..++.+++.++++.....+.++..
T Consensus 118 tY~l-~~l~YT~vniPy~al~~~iT~d~~ER~~l~s~R~~~~~~g~~l~~~~~~plv~~~g~~~~~~g~~~~~~~~~vi~ 196 (467)
T COG2211 118 TYML-LGLGYTLVNIPYGALGPEITQDPQERASLTSWRMVFASLGGLLVAVLFPPLVKLFGGGDKALGYQGTALVLGVIG 196 (467)
T ss_pred HHHH-HHHHHHheeCchhhcchhhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCcchhhHHHHHHHHHHHH
Confidence 3332 22555667888888888877 6679999999988888877333 2 33446666777899998888888887
Q ss_pred HHHHHHHH
Q 011118 467 AAILYTFH 474 (493)
Q Consensus 467 ~~~l~~~~ 474 (493)
...+++.|
T Consensus 197 ~i~~l~~~ 204 (467)
T COG2211 197 VILLLFCF 204 (467)
T ss_pred HHHHHHHH
Confidence 77777766
No 246
>PF05631 DUF791: Protein of unknown function (DUF791); InterPro: IPR008509 This family consists of several eukaryotic proteins of unknown function.
Probab=63.68 E-value=2e+02 Score=30.28 Aligned_cols=42 Identities=14% Similarity=-0.013 Sum_probs=35.7
Q ss_pred HcCCCchHHHHHHHHHHHHHHHHHHHHHHHHhhhchhhhhHH
Q 011118 322 WEGIPAYIIGIARGISATIGIAATILYPILQSRISTLRTGLW 363 (493)
Q Consensus 322 ~~gls~~~iG~~r~~~av~GllgT~~~~~l~~riGl~r~g~~ 363 (493)
+.|+++.+++.+...|-+.+.+-..+.+.+..|+|-.|.-+.
T Consensus 63 ~yg~~~~qIa~Lf~~Gf~Ss~i~g~~~G~laD~~Grk~~cl~ 104 (354)
T PF05631_consen 63 SYGFSEHQIAILFVAGFASSAIFGTFVGSLADRYGRKKACLL 104 (354)
T ss_pred HcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCchHHHHH
Confidence 579999999999999999888777777999999997776543
No 247
>KOG3762 consensus Predicted transporter [General function prediction only]
Probab=63.06 E-value=11 Score=41.70 Aligned_cols=54 Identities=19% Similarity=0.225 Sum_probs=48.1
Q ss_pred hhHHHHHHHHcCCCchHHHHHHHHHHHHHHHHHHHHHHHHhhhchhhhhHHHHH
Q 011118 313 GTLMTATLEWEGIPAYIIGIARGISATIGIAATILYPILQSRISTLRTGLWSIW 366 (493)
Q Consensus 313 ~~l~~~yl~~~gls~~~iG~~r~~~av~GllgT~~~~~l~~riGl~r~g~~~~~ 366 (493)
..+|.+|.+.+|++++++|.+.+.-=+.++++.-+.+.+.+|+--.|--+++..
T Consensus 31 ~pll~vy~kQLGl~p~~~Gtl~g~~P~v~~L~~P~~g~~Adr~r~~r~lllgsl 84 (618)
T KOG3762|consen 31 FPLLAVYFKQLGLNPAVVGTLTGTLPLVEFLAAPLWGFLADRYRKRRPLLLGSL 84 (618)
T ss_pred chHHHHHHHHcCCCHHHhhhhhhHHHHHHHHhHHHHHHHHHHHHhcCchhHHHH
Confidence 348999999999999999999999999999999999999999987776665553
No 248
>KOG3764 consensus Vesicular amine transporter [Intracellular trafficking, secretion, and vesicular transport]
Probab=61.04 E-value=72 Score=34.33 Aligned_cols=112 Identities=20% Similarity=0.207 Sum_probs=77.2
Q ss_pred cCCCchHHHHHHHHHHHHHHHHHHHHHHHHhhhchhhhhHHHHHHHHHHHHHHHHHHh-hcchHHHHHHHHHHHHhhhch
Q 011118 323 EGIPAYIIGIARGISATIGIAATILYPILQSRISTLRTGLWSIWSQWFCLLICVASIW-IHNSLVAAYMLMVGVATSRLG 401 (493)
Q Consensus 323 ~gls~~~iG~~r~~~av~GllgT~~~~~l~~riGl~r~g~~~~~~q~~~L~~~v~~~~-~~~~~~s~~~l~~gi~~SR~G 401 (493)
.+-++.++|++.+.=|+.-++..-..+.+..|+|-.--..+++. .+......+ ...+.+ +++..=++..+|
T Consensus 101 ~~~e~~~iG~LFaskA~~qllvnp~~G~l~~~iGy~ipm~~Gl~-----vmf~sTilFafg~sy~---~l~vAR~LQgvg 172 (464)
T KOG3764|consen 101 LDRENTQIGLLFASKALVQLLVNPFFGNLIDRIGYKIPMVAGLF-----VMFLSTILFAFGNSYP---MLFVARSLQGVG 172 (464)
T ss_pred ccccccchhHHHHHHHHHHHHhcccchhhHHHhccccHHHHHHH-----HHHHHHHHHHHcchhH---HHHHHHHHhhhh
Confidence 55678899999999999999999999999999995444444443 111111122 222332 555666677788
Q ss_pred hhhhhhhhhhhhhccCCCC-cchhHHHHHHHHHHhhHHHHHH
Q 011118 402 LWMFDLSVIQQMQDLVPES-DRCVVGGVQNSLQSTMDLMAYT 442 (493)
Q Consensus 402 Lw~fDl~~~~l~Qe~vp~~-~rG~v~gv~~sl~~~f~l~~~~ 442 (493)
--..|.+...++=...||+ +||++.|+.-..-++-.+....
T Consensus 173 sA~~~tsglamlAd~f~~d~er~~vmGialgfislG~lvgPp 214 (464)
T KOG3764|consen 173 SAFADTSGLAMLADVFPEDNERGSVMGIALGFISLGVLVGPP 214 (464)
T ss_pred HHHHHhhhHHHHHHHcccchhhhHHHHHHHHHHhccceecCC
Confidence 8888999888887777555 7899999877666655444433
No 249
>COG3263 NhaP-type Na+/H+ and K+/H+ antiporters with a unique C-terminal domain [Inorganic ion transport and metabolism]
Probab=60.70 E-value=1.5e+02 Score=32.17 Aligned_cols=99 Identities=19% Similarity=0.242 Sum_probs=68.0
Q ss_pred HHHHHHHHHHHHHHHHHHHhhhchhhhhHHHHHHHHHHHHHHHHHH----hhcchH-HHHHHHHHHHHhhhchhhhhhhh
Q 011118 334 RGISATIGIAATILYPILQSRISTLRTGLWSIWSQWFCLLICVASI----WIHNSL-VAAYMLMVGVATSRLGLWMFDLS 408 (493)
Q Consensus 334 r~~~av~GllgT~~~~~l~~riGl~r~g~~~~~~q~~~L~~~v~~~----~~~~~~-~s~~~l~~gi~~SR~GLw~fDl~ 408 (493)
.|.|++.|+.|.++.-++.+|+.+- .|+..+. .+..+++.+ +.+++. .++| +.|..+
T Consensus 194 ~glG~l~G~~gg~l~~~~Inr~nLd-~GL~pil----~la~~Ll~fs~t~aiGGsG~LaVY--l~Gll~----------- 255 (574)
T COG3263 194 FGLGLLLGLGGGKLLLQLINRINLD-SGLYPIL----ALAGGLLIFSLTGAIGGSGILAVY--LAGLLL----------- 255 (574)
T ss_pred hhHHHHHHHHHHHHHHHHHHhhccc-cchhHHH----HHHHHHHHHHHHHHhcCcccHHHH--HHHHHh-----------
Confidence 5789999999999999999999876 6665553 233333322 223332 2232 233331
Q ss_pred hhhhhhccCCCCcchhHHHHHHHHHHhhHHHHHHHHHhccCCCCchHH
Q 011118 409 VIQQMQDLVPESDRCVVGGVQNSLQSTMDLMAYTMGIIISNPQDFWKL 456 (493)
Q Consensus 409 ~~~l~Qe~vp~~~rG~v~gv~~sl~~~f~l~~~~~~ii~~~p~~F~~l 456 (493)
-+-|-+.|-.+--.+.-+.+++.+++|.+==++-.|+|+...
T Consensus 256 ------GN~~i~~r~~I~~f~dG~twlaQI~MFlvLGLLvtPsql~~i 297 (574)
T COG3263 256 ------GNRPIRARHGILRFFDGLAWLAQILMFLVLGLLVTPSQLLPI 297 (574)
T ss_pred ------CCCcchhHHHHHHHhccHHHHHHHHHHHHHHHhcCHhhhhHh
Confidence 234777788888889999999999998877777889998773
No 250
>PF03092 BT1: BT1 family; InterPro: IPR004324 Members of this family are transmembrane proteins. Several are Leishmania putative proteins that are thought to be pteridine transporters [, ]. This family also contains five putative Arabidopsis thaliana proteins of unknown function as well as two predicted prokaryotic proteins (from the cyanobacteria Synechocystis and Synechococcus).
Probab=56.53 E-value=2.6e+02 Score=29.77 Aligned_cols=137 Identities=14% Similarity=0.094 Sum_probs=66.6
Q ss_pred HHHHHH-HcCCCchHHHHHHHHHHHHHH--HHHHHHHHHHhhh---chhhhhHHHHHHHHHHHHHHHHHHhhcchHHHHH
Q 011118 316 MTATLE-WEGIPAYIIGIARGISATIGI--AATILYPILQSRI---STLRTGLWSIWSQWFCLLICVASIWIHNSLVAAY 389 (493)
Q Consensus 316 ~~~yl~-~~gls~~~iG~~r~~~av~Gl--lgT~~~~~l~~ri---Gl~r~g~~~~~~q~~~L~~~v~~~~~~~~~~s~~ 389 (493)
...|++ ++|++++++..+.+. .++ .--.+++.+...+ |-.|-...-+.+- ++......-...+....+..
T Consensus 12 ~~~~l~~~l~ls~~~~~~~~~~---~~lPw~~Kp~~g~lsD~~pi~G~rr~~Y~~i~~~-~~~~~~~~~~~~~~~~~s~~ 87 (433)
T PF03092_consen 12 IYPFLKDDLGLSPAQLQRLSSL---ASLPWSIKPLYGLLSDSFPIFGYRRKPYMIIGWL-LGAVSALVLALLPASESSAA 87 (433)
T ss_pred HHHHHHHHcCCCHHHHHHHHHH---HhCchHHhhhHHhhcccccccCCcchHHHHHHHH-HHHHHHHHHHhcccccchhh
Confidence 445777 599999998887666 444 2222233333332 3344443322211 11111111111222122333
Q ss_pred HHHHHHHhhhchhhhhhhhhhhhhhccC---CCCcchhHHHHHHHHHHhhH-HHHHHHHHhccCCCCchHHH
Q 011118 390 MLMVGVATSRLGLWMFDLSVIQQMQDLV---PESDRCVVGGVQNSLQSTMD-LMAYTMGIIISNPQDFWKLI 457 (493)
Q Consensus 390 ~l~~gi~~SR~GLw~fDl~~~~l~Qe~v---p~~~rG~v~gv~~sl~~~f~-l~~~~~~ii~~~p~~F~~l~ 457 (493)
.....+.++.+|...-|+....+.=|.. |++ ||..-+......+... ++.++.|.+...-+......
T Consensus 88 ~~~~~l~la~~g~a~~DV~aDa~vvE~~~~~p~~-~g~lqS~~~~~~~~G~lv~~~l~G~l~~~~~~~~~f~ 158 (433)
T PF03092_consen 88 IAVVLLFLASFGYAFADVAADALVVELARREPES-RGDLQSFVWGVRSVGSLVGSLLSGPLLDSFGPQGVFL 158 (433)
T ss_pred hHHHHHHHHHHHHHHHHHhhhHHHHHHhhcCCch-hHHHHHHHHHHHHHHHHHHHHhhhhhhhcCCCeEEeh
Confidence 3344556678899999998877666655 333 6665544444444443 33334445544443333333
No 251
>PF04884 DUF647: Vitamin B6 photo-protection and homoeostasis; InterPro: IPR006968 This is a family of proteins of unknown function, restricted to eukaryotes.
Probab=55.45 E-value=2.2e+02 Score=28.49 Aligned_cols=114 Identities=20% Similarity=0.133 Sum_probs=75.3
Q ss_pred HHHHHHHhhhccceeeecccchhHHHHHHHHHHHHHHHHHHHHHHHHHhhcccccchhHHHHHHHHHHHHHHHHHHhhhh
Q 011118 61 VESASIALFGPIVGHWVDKLTYVKVLQIWLVTQNLSFIVAGVSVITLLFFSSLKSTNFIAFVLLVILTNISGAVGVISTL 140 (493)
Q Consensus 61 ~~~l~~llfg~~vG~~vDr~~R~~v~~~~~~~q~~~v~~s~~~~~~~l~~~~~~~~~~~~~~~l~~~~~~~g~~~~l~~~ 140 (493)
...+..++|+...|.-.|-.+|+-=+ .+|+...++.++=+ +.| ..++ .|..+..++.++=.+..++.-
T Consensus 85 ~G~lg~ilfa~~~g~~~D~d~K~wRl-~ad~l~d~a~~lEl------~tP---~~P~--~fl~la~~a~~~k~v~~va~g 152 (250)
T PF04884_consen 85 LGMLGRILFAWRFGSSFDSDPKRWRL-VADVLNDAAMILEL------LTP---LFPQ--YFLPLACLANVAKAVCGVAGG 152 (250)
T ss_pred HHHHHHHHhhhcccccccccchhHhh-HHHHHHHHHHHHHH------HHH---hhhH--HHHHHHHHHHHHHHHHHHHhh
Confidence 35678899999999999999765443 46777777643211 111 0011 333333334444444455555
Q ss_pred hhhhhhccceEEEecCCCChhhhhhhhhHHHhHHHHHHhhhhHHHHHHHHhhh
Q 011118 141 AGTILIEREWVVVISEGHPPEALTKMNSIIRRIDLTCKLLAPAITGFIISFVS 193 (493)
Q Consensus 141 a~~iaieRDWvv~i~~~~~~~~L~~~Na~mrriDl~~~l~gP~~~G~l~~~~s 193 (493)
+..-++.+-+- .+ +.+.+.||+-..-...++++|=+++-.+....+
T Consensus 153 aTraai~~hfA----~~---~NlaDv~AK~~sQet~~~LlG~~~Gi~l~~~~~ 198 (250)
T PF04884_consen 153 ATRAAITQHFA----RR---NNLADVTAKDGSQETAANLLGMLLGIFLSSLVS 198 (250)
T ss_pred hhHHHHHHHHH----hh---CcHHHHHHHHhHHHHHHHHHHHHHHHHHHHHhc
Confidence 55666666553 44 469999999999999999999999988888776
No 252
>COG4232 Thiol:disulfide interchange protein [Posttranslational modification, protein turnover, chaperones / Energy production and conversion]
Probab=53.79 E-value=71 Score=35.56 Aligned_cols=73 Identities=21% Similarity=0.240 Sum_probs=40.4
Q ss_pred cccceeeecccchHHHHHHHHHHH--Hhhh-hh----hHHHHHHH--HcCCCchHHHHHHHHHHHHHHHHH-HHHHHHHh
Q 011118 284 VGAWQVYLKQEVVLPGVSLALLFF--TVLS-FG----TLMTATLE--WEGIPAYIIGIARGISATIGIAAT-ILYPILQS 353 (493)
Q Consensus 284 ~~g~~~y~~q~v~la~~alalLy~--tVL~-f~----~l~~~yl~--~~gls~~~iG~~r~~~av~GllgT-~~~~~l~~ 353 (493)
.-+|..-++||.++..+++-++-+ ..+| |. +-+.+++. +.+-+...++.....|++.|++.+ -.+|+|..
T Consensus 235 gl~~q~qLQ~P~vl~~la~lf~llALSMfGlFelqlP~s~q~~l~~~S~~~~gG~~~GaF~mG~La~Lv~sPCt~ppLa~ 314 (569)
T COG4232 235 GLGWQAQLQQPWVLGGLAALFVLLALSMFGLFELQLPSSLQTRLTQQSNRASGGSIVGAFFMGALAGLVVSPCTAPPLAG 314 (569)
T ss_pred cchhhHhHcccHHHHHHHHHHHHHHHHhhhheeecCcHHHhhHHhhhhcccCCCchHHHHHHHHHHHHhcCcCcchhHHH
Confidence 468999999999998888764443 2222 11 13334443 233344435555555666666433 33455555
Q ss_pred hhc
Q 011118 354 RIS 356 (493)
Q Consensus 354 riG 356 (493)
-++
T Consensus 315 aL~ 317 (569)
T COG4232 315 ALL 317 (569)
T ss_pred HHH
Confidence 555
No 253
>KOG2615 consensus Permease of the major facilitator superfamily [General function prediction only]
Probab=52.55 E-value=1.7e+02 Score=31.36 Aligned_cols=131 Identities=19% Similarity=0.222 Sum_probs=71.9
Q ss_pred HHHH-HHhhhhhhHHHHHHHHcCCCchHHHHHHHHHHHHHHHHHHHHHHHHhhhchhhhhHHHHHHHHHHHHHHHHHH--
Q 011118 303 ALLF-FTVLSFGTLMTATLEWEGIPAYIIGIARGISATIGIAATILYPILQSRISTLRTGLWSIWSQWFCLLICVASI-- 379 (493)
Q Consensus 303 alLy-~tVL~f~~l~~~yl~~~gls~~~iG~~r~~~av~GllgT~~~~~l~~riGl~r~g~~~~~~q~~~L~~~v~~~-- 379 (493)
+-|| +-+-+.+...++--..+|-+...=|..-+.=++.-...+...+.+..++|-..+.+ +|+....++.
T Consensus 42 ~~L~~~~~~~V~~F~~a~~~~~~~~~~yaGflGSsF~ilQ~~sS~~~G~~SD~yGRkpvll-------~c~~~va~s~ll 114 (451)
T KOG2615|consen 42 SSLYPFVVFMVRDFNIAIGEPDGASVFYAGFLGSSFSILQFISSPLWGCLSDRYGRKPVLL-------ACLIGVALSYLL 114 (451)
T ss_pred cchhHHHHHhhHHHHHhhCCcccccchhhhhHhhHHHHHHHHhhhhhhhhhhhhCchHHHH-------HHHHHHHHHHHH
Confidence 4555 22333444444444445534444445445555666777778888899999444433 3444443332
Q ss_pred hhcchHHHHHHHHHHHHhhhchhhhhh--hh-hhhhhhccCCCCcchhHHHHHHH-HHHhhHHHHHHHHHh
Q 011118 380 WIHNSLVAAYMLMVGVATSRLGLWMFD--LS-VIQQMQDLVPESDRCVVGGVQNS-LQSTMDLMAYTMGII 446 (493)
Q Consensus 380 ~~~~~~~s~~~l~~gi~~SR~GLw~fD--l~-~~~l~Qe~vp~~~rG~v~gv~~s-l~~~f~l~~~~~~ii 446 (493)
|.-... +..++++|+=.-.|+ +. .+.++-|.++|++|+...++... .+-+|-++-.+.+.+
T Consensus 115 ~~~S~~------F~afv~aR~l~Gi~kgnl~v~rAiisdV~sek~r~l~ms~v~~a~~lGfilGPmIGgyl 179 (451)
T KOG2615|consen 115 WALSRN------FAAFVLARFLGGIFKGNLSVIRAIISDVVSEKYRPLGMSLVGTAFGLGFILGPMIGGYL 179 (451)
T ss_pred HHHHHH------HHHHHHHHHhhhhccCchHHHHHHHHhhcChhhccceeeeeehhhhcchhhcchhhhHH
Confidence 221111 134556666444444 22 35688899999999998876543 334444444444444
No 254
>KOG2533 consensus Permease of the major facilitator superfamily [Carbohydrate transport and metabolism]
Probab=51.72 E-value=3.6e+02 Score=29.67 Aligned_cols=115 Identities=15% Similarity=0.049 Sum_probs=73.2
Q ss_pred cCCCchHHHHHHHHHHHHHHHHHHHHHHHHhhhchhhhhHHHHHHHHHHHHHHHHHHhhc-chHHHHHHHHHHHHhhhch
Q 011118 323 EGIPAYIIGIARGISATIGIAATILYPILQSRISTLRTGLWSIWSQWFCLLICVASIWIH-NSLVAAYMLMVGVATSRLG 401 (493)
Q Consensus 323 ~gls~~~iG~~r~~~av~GllgT~~~~~l~~riGl~r~g~~~~~~q~~~L~~~v~~~~~~-~~~~s~~~l~~gi~~SR~G 401 (493)
.++...++|..-++--++=++|=+.++.|.+|+++.|....... +.-..+.+..+.. -+..-+.-++.|++=| +
T Consensus 76 l~~~~~~l~~~~t~F~v~Yii~~~p~~~L~~r~~ls~~l~~~~~---~w~~~~~~~~~~~s~~~~ialr~llGl~es--~ 150 (495)
T KOG2533|consen 76 LKLVGNQLGVLDTVFYVGYIIGQFPSGLLGDRFPLSKGLSVSGI---LWGLFGFLTAAVHSFPGLIALRFLLGLFES--G 150 (495)
T ss_pred cchhhhhhhhHHHHHHHHHHHHHhhHHHHHHhCChHHHHHHHHH---HHHHHHHHHHHHhhhHHHHHHHHHHHHHhc--c
Confidence 44556689999998888889999999999999996654332221 1111222222321 1222233334444322 2
Q ss_pred hhhhhhhhhhhhhccCCCCcchhHHHHHHHHHHhh-HHHHHHHHH
Q 011118 402 LWMFDLSVIQQMQDLVPESDRCVVGGVQNSLQSTM-DLMAYTMGI 445 (493)
Q Consensus 402 Lw~fDl~~~~l~Qe~vp~~~rG~v~gv~~sl~~~f-~l~~~~~~i 445 (493)
.| ++...++...-.++|||...|+-.+-+++. -++.++...
T Consensus 151 ~w---P~~~~~lg~wy~~~e~g~r~~~~~a~~~~g~i~ggliA~g 192 (495)
T KOG2533|consen 151 GW---PGVVAILGNWYGKSERGLRMGIWYASASLGNIFGGLIAYG 192 (495)
T ss_pred cc---hHHHHHHHhhcChhhhhhhHHHHHHhcchhhHHHHHHHHH
Confidence 34 888899999999999999999988777766 334444444
No 255
>PF06796 NapE: Periplasmic nitrate reductase protein NapE; InterPro: IPR010649 This family consists of several bacterial periplasmic nitrate reductase NapE proteins. Seven genes, napKEFDABC, encoding the periplasmic nitrate reductase system were cloned from the denitrifying phototrophic bacterium Rhodobacter sphaeroides. NapE is thought to be a transmembrane protein [].
Probab=50.22 E-value=67 Score=24.53 Aligned_cols=23 Identities=26% Similarity=0.389 Sum_probs=20.1
Q ss_pred chHHHHHHHHHHHHHHHhhhccc
Q 011118 51 SLLFAAIYGAVESASIALFGPIV 73 (493)
Q Consensus 51 sll~~sv~gl~~~l~~llfg~~v 73 (493)
+..-+|.|||+....++++||+.
T Consensus 33 ~v~~Vg~YGF~VWm~Q~~~GpPg 55 (56)
T PF06796_consen 33 AVAFVGGYGFIVWMYQIFFGPPG 55 (56)
T ss_pred HHHHHHHHHHHHHHHHHHcCCCC
Confidence 55678999999999999999874
No 256
>PF13955 Fst_toxin: Toxin Fst, type I toxin-antitoxin system; PDB: 2KV5_A.
Probab=46.75 E-value=28 Score=21.15 Aligned_cols=17 Identities=18% Similarity=0.671 Sum_probs=14.1
Q ss_pred HHhhhhHHHHHHHHhhh
Q 011118 177 CKLLAPAITGFIISFVS 193 (493)
Q Consensus 177 ~~l~gP~~~G~l~~~~s 193 (493)
..+.+|+++|.++..++
T Consensus 2 ~~iIaPi~VGvvl~l~~ 18 (21)
T PF13955_consen 2 TTIIAPIVVGVVLTLFD 18 (21)
T ss_dssp HHHHHHHHHHHHHHHHH
T ss_pred ceehhhHHHHHHHHHHH
Confidence 46899999999988665
No 257
>PF01169 UPF0016: Uncharacterized protein family UPF0016; InterPro: IPR001727 A number of uncharacterised proteins share regions of similarities. These include, Saccharomyces cerevisiae (Baker's yeast) hypothetical protein YBR187w. Schizosaccharomyces pombe (Fission yeast) hypothetical protein SpAC17G8.08c. Mus musculus (Mouse) protein pFT27. Synechocystis sp. (strain PCC 6803) hypothetical protein sll0615. These are hydrophobic proteins of 200 to 320 amino acids that seem to contain six or seven transmembrane domains.; GO: 0016020 membrane
Probab=46.03 E-value=90 Score=25.26 Aligned_cols=62 Identities=15% Similarity=0.258 Sum_probs=43.6
Q ss_pred HHHHHHHHHhhHHHHHHHHHHHHHhCCCchHHHHHHHHHHHHHHHhhhccceeee-cccchhHHH
Q 011118 23 YVAHFLARWGARMWEFSVGLYMISVWPDSLLFAAIYGAVESASIALFGPIVGHWV-DKLTYVKVL 86 (493)
Q Consensus 23 ~~s~~lS~~Gdr~~~Fa~~L~lv~l~~~sll~~sv~gl~~~l~~llfg~~vG~~v-Dr~~R~~v~ 86 (493)
...-+++.|||+..-.++.+ +.-+|++..++-.=...-....-.++..+|+++ ++.|++.+-
T Consensus 5 f~~iflaE~GDKTQl~t~~L--a~~~~~~~~~V~~G~~~al~~~~~lav~~G~~l~~~ip~~~i~ 67 (78)
T PF01169_consen 5 FLLIFLAELGDKTQLATIAL--AARYPRNPWPVFAGATLALALATGLAVLLGSWLASRIPERYIK 67 (78)
T ss_pred HHHHHHHHhCcHHHHHHHHH--HhcCccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHH
Confidence 35568999999987666655 455666767766666666666777788888888 555666543
No 258
>TIGR02230 ATPase_gene1 F0F1-ATPase subunit, putative. This model represents a protein found encoded in F1F0-ATPase operons in several genomes, including Methanosarcina barkeri (archaeal) and Chlorobium tepidum (bacterial). It is a small protein (about 100 amino acids) with long hydrophic stretches and is presumed to be a subunit of the enzyme.
Probab=44.29 E-value=37 Score=29.01 Aligned_cols=28 Identities=29% Similarity=0.503 Sum_probs=20.1
Q ss_pred hHHHHHHHHHHHHHHHhhhccceeeeccc
Q 011118 52 LLFAAIYGAVESASIALFGPIVGHWVDKL 80 (493)
Q Consensus 52 ll~~sv~gl~~~l~~llfg~~vG~~vDr~ 80 (493)
+-.+|..|....+| ++.|.++|.|.|++
T Consensus 42 l~~~g~IG~~~v~p-il~G~~lG~WLD~~ 69 (100)
T TIGR02230 42 LGMFGLIGWSVAIP-TLLGVAVGIWLDRH 69 (100)
T ss_pred HHHHHHHHHHHHHH-HHHHHHHHHHHHhh
Confidence 34556777755444 45599999999998
No 259
>PF03137 OATP: Organic Anion Transporter Polypeptide (OATP) family; InterPro: IPR004156 This family consists of several eukaryotic Organic-Anion-Transporting Polypeptides (OATPs). Several have been identified mostly in human and rat. Different OATPs vary in tissue distribution and substrate specificity. Since the numbering of different OATPs in particular species was based originally on the order of discovery, similarly numbered OATPs in humans and rats did not necessarily correspond in function, tissue distribution and substrate specificity (in spite of the name, some OATPs also transport organic cations and neutral molecules) so a scheme of using digits for rat OATPs and letters for human ones was introduced []. Prostaglandin transporter (PGT) proteins are also considered to be OATP family members. In addition, the methotrexate transporter OATK is closely related to OATPs. This family also includes several predicted proteins from Caenorhabditis elegans and Drosophila melanogaster. This similarity was not previously noted. Note: Members of this family are described (in the UniProtKB/Swiss-Prot database) as belonging to the SLC21 family of transporters.; GO: 0005215 transporter activity, 0006810 transport, 0016020 membrane; PDB: 3MRR_P.
Probab=43.33 E-value=7.9 Score=42.87 Aligned_cols=79 Identities=19% Similarity=0.183 Sum_probs=0.0
Q ss_pred cccceeeecccchHHHHHHHHHH-HHhhhhhhHHHHHHHH-cCCCchHHHHHHHHHHH-HHHHHHHHHHHHHhhhchhhh
Q 011118 284 VGAWQVYLKQEVVLPGVSLALLF-FTVLSFGTLMTATLEW-EGIPAYIIGIARGISAT-IGIAATILYPILQSRISTLRT 360 (493)
Q Consensus 284 ~~g~~~y~~q~v~la~~alalLy-~tVL~f~~l~~~yl~~-~gls~~~iG~~r~~~av-~GllgT~~~~~l~~riGl~r~ 360 (493)
....+.-+++|+|.-........ +.+.+|.+.+.-|+.+ -|++++.-+.+.|+-.+ ++.+|+++.+.++||+.+..-
T Consensus 295 ~~~l~~Ll~Np~f~~~~la~~~~~~~~~G~~tF~pKylE~QF~~sas~A~~l~G~v~ip~~~~G~llGG~ivkk~kl~~~ 374 (539)
T PF03137_consen 295 PKALKRLLTNPVFMCLILAGVFESFIVSGFATFLPKYLESQFGLSASQASLLTGIVSIPGAALGILLGGYIVKKFKLSAR 374 (539)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred HHHHHHHhcChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCHHHHHHHHhhhhcchhheehheEEEEEEEecCcHH
Confidence 34456668888777655555444 5567899999999995 69999988888876665 666999999999999987544
Q ss_pred hH
Q 011118 361 GL 362 (493)
Q Consensus 361 g~ 362 (493)
+.
T Consensus 375 ~~ 376 (539)
T PF03137_consen 375 GA 376 (539)
T ss_dssp --
T ss_pred HH
Confidence 43
No 260
>COG3104 PTR2 Dipeptide/tripeptide permease [Amino acid transport and metabolism]
Probab=42.69 E-value=5e+02 Score=28.62 Aligned_cols=92 Identities=12% Similarity=0.150 Sum_probs=57.1
Q ss_pred chHHHHHHHHHHHHhhhchhhhhhhhhhhhhhccCCCCcchhHHHHHHHHHHhh-HHHHHHHHH------hccCCCCchH
Q 011118 383 NSLVAAYMLMVGVATSRLGLWMFDLSVIQQMQDLVPESDRCVVGGVQNSLQSTM-DLMAYTMGI------IISNPQDFWK 455 (493)
Q Consensus 383 ~~~~s~~~l~~gi~~SR~GLw~fDl~~~~l~Qe~vp~~~rG~v~gv~~sl~~~f-~l~~~~~~i------i~~~p~~F~~ 455 (493)
....|...++.+.++-.+|=-..|....++.-+..|++..+.+.|+-.--+..- -+...+.+. ......+-..
T Consensus 389 ~~~~s~~~lil~y~l~s~gEL~iSpvGLs~~t~laP~~~~s~~ma~wfLt~a~~~~l~g~va~~~~~~~~~~~~~~~~~~ 468 (498)
T COG3104 389 SGLVSVWWLVLSYVLQSFGELFISPVGLSMVTKLAPPALKSFIMAMWFLTVAAGQTLGGQVAGLTAVTDPAYTAFIEGRV 468 (498)
T ss_pred CCCcCHHHHHHHHHHHHHHHHHhCHHHHHHHHHhChHHHHHHHHHHHHHHHHHHHHhhceecccccccchhhhhhhhhhh
Confidence 345677777777777778878888999999999999988888877655444333 222222221 2223333444
Q ss_pred HHHHHHHHHHHHHHHHHHH
Q 011118 456 LILISVIVVTLAAILYTFH 474 (493)
Q Consensus 456 l~~~S~~~V~~~~~l~~~~ 474 (493)
-+.+...++..+.+++...
T Consensus 469 F~~~g~v~i~~~~~~~~~~ 487 (498)
T COG3104 469 FGTIGVVAIVIGILLLLLS 487 (498)
T ss_pred HHHHHHHHHHHHHHHHHhh
Confidence 4555555666666655543
No 261
>COG3104 PTR2 Dipeptide/tripeptide permease [Amino acid transport and metabolism]
Probab=40.13 E-value=5.1e+02 Score=28.57 Aligned_cols=173 Identities=17% Similarity=0.177 Sum_probs=80.2
Q ss_pred ecccchHHHHHHHHHH--HHhhhhhhHHHHHHHH-cC----CCch----HHHHHHHHHHHHHHHHHHHHHHHHhh-hchh
Q 011118 291 LKQEVVLPGVSLALLF--FTVLSFGTLMTATLEW-EG----IPAY----IIGIARGISATIGIAATILYPILQSR-ISTL 358 (493)
Q Consensus 291 ~~q~v~la~~alalLy--~tVL~f~~l~~~yl~~-~g----ls~~----~iG~~r~~~av~GllgT~~~~~l~~r-iGl~ 358 (493)
++||-=+.-+...=++ |..-|...+++.|+++ .+ ++++ ..|.+-+..=+ -+++.+++..| +|-.
T Consensus 17 f~~Pr~l~~if~vE~WERFsyYGmraiL~~Yl~~~~~~gLg~~~~~A~~l~~~y~slVY~----t~i~GG~laDr~LG~~ 92 (498)
T COG3104 17 FGQPRGLYLIFFVELWERFSYYGMRAILILYLYYQLGDGLGFDETHATGLFSAYGSLVYL----TPIIGGWLADRVLGTR 92 (498)
T ss_pred CCCCchHHHHHHHHHHHHHhhhhhHHHHHHHHHHhccccCCcChHhhHHHHHHHHHHHHH----HHHHHHHHHHHhcchh
Confidence 4455333333333222 5666777888889884 56 7665 33333333333 44445556555 5777
Q ss_pred hhhHHHHHHHHHHHHHHHHHHhhcchHHHHHHHHHHHHhhhchhhhhhhhhhhhhhccCCCCcchhHHH---HHHHHHHh
Q 011118 359 RTGLWSIWSQWFCLLICVASIWIHNSLVAAYMLMVGVATSRLGLWMFDLSVIQQMQDLVPESDRCVVGG---VQNSLQST 435 (493)
Q Consensus 359 r~g~~~~~~q~~~L~~~v~~~~~~~~~~s~~~l~~gi~~SR~GLw~fDl~~~~l~Qe~vp~~~rG~v~g---v~~sl~~~ 435 (493)
||-..+-. ....+-.....++ ..+...+.++.++--+|-=.+--+...++=|.-|+++.=|..| -..+.|.+
T Consensus 93 ~tI~lGai----l~~iGh~~L~~~~-~~~~~gl~i~L~~I~iG~Gl~K~NiS~llg~ly~~~DprrD~gFt~fY~~iNiG 167 (498)
T COG3104 93 RTIVLGAI----LMAIGHLVLAISS-VSGPGGLYIGLALIIVGTGLFKPNISSLLGELYPKDDPRRDGGFTLFYMGINIG 167 (498)
T ss_pred HHHHHHHH----HHHHHHHHHhccc-cccccHHHHHHHHHHhccccccccHHHHHHHhcCCCCcccCCCccEEEEEeehH
Confidence 77665543 2222322222221 0111122222222224444456666666655554332214333 22333333
Q ss_pred hHHHHHHHHHhccCCCCchHHHHHHHHHHHHHHHHHHHHH
Q 011118 436 MDLMAYTMGIIISNPQDFWKLILISVIVVTLAAILYTFHL 475 (493)
Q Consensus 436 f~l~~~~~~ii~~~p~~F~~l~~~S~~~V~~~~~l~~~~~ 475 (493)
.-...++.+.+. +..+|.+.....+|.....+..+++
T Consensus 168 sl~~p~i~~~~~---~~~g~~~gF~~aavGm~~gl~~f~~ 204 (498)
T COG3104 168 SLIAPIITGLLA---INYGWHVGFGLAAVGMIIGLVIFLL 204 (498)
T ss_pred HHHHHHHHHHHH---HhhCHHHHHHHHHHHHHHHHHHHHH
Confidence 211122222222 3445777777777776666666654
No 262
>TIGR02973 nitrate_rd_NapE periplasmic nitrate reductase, NapE protein. NapE, homologous to TorE (TIGR02972), is a membrane protein of unknown function that is part of the periplasmic nitrate reductase system; it may be part of the enzyme complex. The periplasmic nitrate reductase allows for nitrate respiration in anaerobic conditions.
Probab=39.04 E-value=89 Score=22.44 Aligned_cols=23 Identities=26% Similarity=0.181 Sum_probs=20.4
Q ss_pred chHHHHHHHHHHHHHHHhhhccc
Q 011118 51 SLLFAAIYGAVESASIALFGPIV 73 (493)
Q Consensus 51 sll~~sv~gl~~~l~~llfg~~v 73 (493)
+...+|.||+.....++++||+.
T Consensus 20 sV~~V~~YGF~vWm~Q~~~GpPg 42 (42)
T TIGR02973 20 SVITVGGYGFAVWMYQILAGPPG 42 (42)
T ss_pred HHHHHHHHHHHHHHHHHhcCCCC
Confidence 66789999999999999999873
No 263
>PF03839 Sec62: Translocation protein Sec62; InterPro: IPR004728 Members of the NSCC2 family have been sequenced from various yeast, fungal and animals species including Saccharomyces cerevisiae, Drosophila melanogaster and Homo sapiens. These proteins are the Sec62 proteins, believed to be associated with the Sec61 and Sec63 constituents of the general protein secretary systems of yeast microsomes. They are also the non-selective cation (NS) channels of the mammalian cytoplasmic membrane. The yeast Sec62 protein has been shown to be essential for cell growth. The mammalian NS channel proteins have been implicated in platelet derived growth factor(PGDF) dependent single channel current in fibroblasts. These channels are essentially closed in serum deprived tissue-culture cells and are specifically opened by exposure to PDGF. These channels are reported to exhibit equal selectivity for Na+, K+ and Cs+ with low permeability to Ca2+, and no permeability to anions.; GO: 0008565 protein transporter activity, 0015031 protein transport, 0016021 integral to membrane
Probab=37.60 E-value=78 Score=31.05 Aligned_cols=70 Identities=19% Similarity=0.438 Sum_probs=38.1
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhhhchhhhhHHHHHHHHHHHHHHHHHHhhcchHHHHHHHHHHHHhh--hchhhhh
Q 011118 329 IIGIARGISATIGIAATILYPILQSRISTLRTGLWSIWSQWFCLLICVASIWIHNSLVAAYMLMVGVATS--RLGLWMF 405 (493)
Q Consensus 329 ~iG~~r~~~av~GllgT~~~~~l~~riGl~r~g~~~~~~q~~~L~~~v~~~~~~~~~~s~~~l~~gi~~S--R~GLw~f 405 (493)
....+.+++.+.|+++-.++|..=..+ |-|.|.+++-.++++. ++..-..+..+++++-.++. +-|.|.|
T Consensus 109 ~~~~l~~~~~~~~v~a~~lFPlWP~~~---r~gv~YlS~~~lgll~----~~~~laivRlilf~i~w~~~~g~~~fWlf 180 (224)
T PF03839_consen 109 LMQYLIGALLLVGVIAICLFPLWPRWM---RQGVYYLSVGALGLLG----LFFALAIVRLILFLITWFFTGGKHGFWLF 180 (224)
T ss_pred HHHHHHHHHHHHHHHHHHhhhcChHHH---hheeehhHHHHHHHHH----HHHHHHHHHHHHHHHHHHHhcCCCCEEeC
Confidence 444556777778888888888766554 3445555421111221 11111233445555555555 6788877
No 264
>TIGR01667 YCCS_YHJK integral membrane protein, YccS/YhfK family. TMHMM on members of this model shows a consensus of 11 transmembrane helices separated into two clusters, an N-terminal cluster of 6 and a central cluster of 5. This would indicate two non-membrane domains one on each side of the membrane
Probab=37.37 E-value=2.2e+02 Score=32.77 Aligned_cols=53 Identities=9% Similarity=-0.031 Sum_probs=41.2
Q ss_pred HhhHHHHHHHHHHHHHhCCCchHHHHHHHHHHHHHHHhhhccceeeecccchhHH
Q 011118 31 WGARMWEFSVGLYMISVWPDSLLFAAIYGAVESASIALFGPIVGHWVDKLTYVKV 85 (493)
Q Consensus 31 ~Gdr~~~Fa~~L~lv~l~~~sll~~sv~gl~~~l~~llfg~~vG~~vDr~~R~~v 85 (493)
|-+..+.+.+|.+++.. ...++.-.+|..+....+.+|...+.+.|.-+|.+.
T Consensus 3 ~~~~~~~~~l~v~ia~~--~~~~~~~~~g~~~~~i~l~lG~ia~~l~D~~~~~~~ 55 (701)
T TIGR01667 3 ALNQKLVYCLPVFIALM--GAELRIWWFGLLFLLIPLCLGIIAAGLDDLDDRLTG 55 (701)
T ss_pred chhhHHHHHHHHHHHHH--HHHHHHHHhCCccHHHHHHHhhHhhccCCCCccHHH
Confidence 34566778899987765 344555668999999999999999999999987543
No 265
>TIGR02972 TMAO_torE trimethylamine N-oxide reductase system, TorE protein. Members of this small, apparent transmembrane protein are designated TorE and occur in operons for the trimethylamine N-oxide (TMAO) reductase system. Members are closely related to the NapE protein of the related periplasmic nitrate reductase system. It may be that TorE is an integral membrane subunit of a complex with the reductase TorA.
Probab=34.81 E-value=1.1e+02 Score=22.55 Aligned_cols=23 Identities=22% Similarity=-0.060 Sum_probs=20.3
Q ss_pred chHHHHHHHHHHHHHHHhhhccc
Q 011118 51 SLLFAAIYGAVESASIALFGPIV 73 (493)
Q Consensus 51 sll~~sv~gl~~~l~~llfg~~v 73 (493)
+...+|-||+.....++++||+.
T Consensus 25 sV~~Vg~YGF~vWm~Q~~~GpPg 47 (47)
T TIGR02972 25 SVAGIGGYGFIIWMIQAFGGVPG 47 (47)
T ss_pred HHHHHHHHHHHHHHHHHHcCCCC
Confidence 66789999999999999999863
No 266
>KOG0253 consensus Synaptic vesicle transporter SV2 (major facilitator superfamily) [General function prediction only]
Probab=34.78 E-value=3.4e+02 Score=29.30 Aligned_cols=186 Identities=14% Similarity=0.050 Sum_probs=0.0
Q ss_pred CCcccccCCCcchhhHHHHHHHHHHHHHhhHHHHHHHHHHHHHhCCCch--------HHHHHHH---------------H
Q 011118 4 EPLIVQEQPAITSFLTTYLYVAHFLARWGARMWEFSVGLYMISVWPDSL--------LFAAIYG---------------A 60 (493)
Q Consensus 4 ~~~~~~~~~~~~~~~~~~L~~s~~lS~~Gdr~~~Fa~~L~lv~l~~~sl--------l~~sv~g---------------l 60 (493)
+.+.-|+...+-.+++++--.-|-.=.+|++--.+...|+-.+++.... .|+=.-- +
T Consensus 309 ~ke~rg~~~nLlsp~lrkttlllw~iwfgnafsyyg~VLlttelfqsgd~c~~~~r~~p~e~e~~~~c~~s~~~dYrdll 388 (528)
T KOG0253|consen 309 AKEVRGGTTNLLSPKLRKTTLLLWRIWFGNAFSYYGSVLLTTELFQSGDACPLYNRFLPTELETRANCPLSVAKDYRDLL 388 (528)
T ss_pred ccccccchHhhcChHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHhccCccccchhcchhHHHhhhcCCccchhHHHHHH
Q ss_pred HHHHHHHhhhccceeeecccchhHHHHHHHHHHHHHHHHHHHHHHHHHhhcccccchhHHHHHHHHHHHHHHHHHHhhhh
Q 011118 61 VESASIALFGPIVGHWVDKLTYVKVLQIWLVTQNLSFIVAGVSVITLLFFSSLKSTNFIAFVLLVILTNISGAVGVISTL 140 (493)
Q Consensus 61 ~~~l~~llfg~~vG~~vDr~~R~~v~~~~~~~q~~~v~~s~~~~~~~l~~~~~~~~~~~~~~~l~~~~~~~g~~~~l~~~ 140 (493)
..+++-.=-....|..|||.+||+.| .++..+-|+..+++... ......+...+. .-.+++.-+.+
T Consensus 389 itslaefPGlLIt~~iverlGRKkTM-------al~l~~f~iflfll~~c---~~rn~~tvllf~----arafisg~fqv 454 (528)
T KOG0253|consen 389 ITSLAEFPGLLITGVIVERLGRKKTM-------ALSLILFGIFLFLLTTC---KTRNAYTVLLFT----ARAFISGAFQV 454 (528)
T ss_pred HHHHhhCCchhHHHHHHHHhcchhHH-------HHHHHHHHHHHHHHHHh---cCcchhHHHHHH----HHHHHhchheE
Q ss_pred hhhhhhccceEEEecCCCChhhhhhhhhHHHhHHHHHHhhhhHHHHHHHHhhhhHH----HHHHHHHHHHHHHHHH
Q 011118 141 AGTILIEREWVVVISEGHPPEALTKMNSIIRRIDLTCKLLAPAITGFIISFVSLQA----SAMTLAIWTTVTVWVE 212 (493)
Q Consensus 141 a~~iaieRDWvv~i~~~~~~~~L~~~Na~mrriDl~~~l~gP~~~G~l~~~~s~~~----a~~~i~~~n~~S~~ve 212 (493)
+ +++ .|.+-.. .-.+..=-.-....-+.-++.|+++-..=...+.++ ++..+++.-.+.+++|
T Consensus 455 a-YvY-----tPEVyPT---avRatgvGtcSsmaRIggI~~p~iA~~~e~s~sl~i~vy~~~~ilagIavcffPiE 521 (528)
T KOG0253|consen 455 A-YVY-----TPEVYPT---AVRATGVGTCSSMARIGGIFSPVIAMRAELSTSLPIFVYGALFILAGIAVCFFPIE 521 (528)
T ss_pred E-EEe-----cCcccch---hhhhcchhhhhhHHhhhhhhhhHHHHHhccceeehHHHHHHHHHHHHHHheeeeec
No 267
>PF14986 DUF4514: Domain of unknown function (DUF4514)
Probab=32.41 E-value=28 Score=26.14 Aligned_cols=36 Identities=31% Similarity=0.398 Sum_probs=26.9
Q ss_pred CCchHHHHHHHHHHHHHHHHHHHHHHHhhcCCCChh
Q 011118 451 QDFWKLILISVIVVTLAAILYTFHLYRIRKHLFHFD 486 (493)
Q Consensus 451 ~~F~~l~~~S~~~V~~~~~l~~~~~~~~Rghl~h~~ 486 (493)
-+|+|.+++....|..++.....-.--.|+|++..|
T Consensus 18 id~KYa~IGtalGvaisAgFLaLKicmIrkhlfD~d 53 (61)
T PF14986_consen 18 IDIKYAIIGTALGVAISAGFLALKICMIRKHLFDND 53 (61)
T ss_pred eeeeeeeehhHHHHHHHHHHHHHHHHHHHHhhccCc
Confidence 368888888888887777666655455799999765
No 268
>COG0670 Integral membrane protein, interacts with FtsH [General function prediction only]
Probab=29.35 E-value=5.6e+02 Score=25.20 Aligned_cols=97 Identities=15% Similarity=0.175 Sum_probs=53.2
Q ss_pred hhhhhHHHHHHHH-cCCCchHHHHHHHHHHHHHHHHHHHHHHHHhhhc-hhhhhHHHHHHHHHHHHHHHHHHhhcchHHH
Q 011118 310 LSFGTLMTATLEW-EGIPAYIIGIARGISATIGIAATILYPILQSRIS-TLRTGLWSIWSQWFCLLICVASIWIHNSLVA 387 (493)
Q Consensus 310 L~f~~l~~~yl~~-~gls~~~iG~~r~~~av~GllgT~~~~~l~~riG-l~r~g~~~~~~q~~~L~~~v~~~~~~~~~~s 387 (493)
+..+.+...|+.. .| ......+-..++++|.++...+.--.+ ++ +.+.-.++++ .+....++..|.+.+...
T Consensus 99 ~tL~~i~~~Y~~~~~~--~~i~~af~~t~~~F~~ls~~g~~tk~D-ls~l~~~l~~ali---gLiiasvvn~Fl~s~~l~ 172 (233)
T COG0670 99 LTLSPILLVYAAISGG--DAIAAAFGITALVFGALSLYGYTTKRD-LSSLGSFLFMALI---GLIIASLVNIFLGSSALH 172 (233)
T ss_pred HHHHHHHHHHHhcccc--cHHHHHHHHHHHHHHHHHHHHHHHhhh-HHHHHHHHHHHHH---HHHHHHHHHHHHcCcHHH
Confidence 4467788888874 44 455556666666666666655443333 44 3344444443 556666777777655333
Q ss_pred HHHHHHHHHhhhchhhhhhhhhhhhh
Q 011118 388 AYMLMVGVATSRLGLWMFDLSVIQQM 413 (493)
Q Consensus 388 ~~~l~~gi~~SR~GLw~fDl~~~~l~ 413 (493)
.++=..|+.+ =.|+-.||.....-+
T Consensus 173 ~~IS~lgvli-fsgli~yDtq~I~~~ 197 (233)
T COG0670 173 LAISVLGVLI-FSGLIAYDTQNIKRM 197 (233)
T ss_pred HHHHHHHHHH-HHHHHHHHHHHHHHH
Confidence 3332333222 256778885444433
No 269
>PF10856 DUF2678: Protein of unknown function (DUF2678); InterPro: IPR022564 This family of proteins has no known function.
Probab=28.45 E-value=39 Score=29.58 Aligned_cols=56 Identities=13% Similarity=0.348 Sum_probs=38.6
Q ss_pred hHHHHHHHHHHhhHHHHHHHHHhccC--CCCchHHHHHHHHHHHHHHHHHHHHHHHhhcC
Q 011118 424 VVGGVQNSLQSTMDLMAYTMGIIISN--PQDFWKLILISVIVVTLAAILYTFHLYRIRKH 481 (493)
Q Consensus 424 ~v~gv~~sl~~~f~l~~~~~~ii~~~--p~~F~~l~~~S~~~V~~~~~l~~~~~~~~Rgh 481 (493)
.++=+..++..++-+.+.+.++++|. |.-..+.-.+.+..++..+++...|.| ||.
T Consensus 29 iinliiG~vT~l~VLvtii~afvf~~~~p~p~~iffavcI~l~~~s~~lLI~WYR--~gd 86 (118)
T PF10856_consen 29 IINLIIGAVTSLFVLVTIISAFVFPQDPPKPLHIFFAVCILLICISAILLIFWYR--QGD 86 (118)
T ss_pred EEEeehHHHHHHHHHHHHhheEEecCCCCCceEEehHHHHHHHHHHHHhheeehh--cCC
Confidence 34445556666677778888888884 454556666677777777888888866 455
No 270
>KOG2563 consensus Permease of the major facilitator superfamily [General function prediction only]
Probab=28.09 E-value=2.1e+02 Score=31.16 Aligned_cols=84 Identities=19% Similarity=0.174 Sum_probs=62.6
Q ss_pred hhhchhhhhhhhhhhhhhccCCCCcchhHHHHHHHHHHhh-HHHHHHHHHhccCCCCchHHHHHHHHHHHHHHHHHHHHH
Q 011118 397 TSRLGLWMFDLSVIQQMQDLVPESDRCVVGGVQNSLQSTM-DLMAYTMGIIISNPQDFWKLILISVIVVTLAAILYTFHL 475 (493)
Q Consensus 397 ~SR~GLw~fDl~~~~l~Qe~vp~~~rG~v~gv~~sl~~~f-~l~~~~~~ii~~~p~~F~~l~~~S~~~V~~~~~l~~~~~ 475 (493)
+..+|+-+|+---+-+-|..+|...=|...|....+.... -+++.++|++..+.+.|+-..++.......+. ++....
T Consensus 274 ~ygi~~g~F~~l~~~l~~~l~~sgY~~~~aG~ig~l~iv~Gmlga~~~gii~Dktk~fk~~~~v~~~~~~v~~-~~l~~~ 352 (480)
T KOG2563|consen 274 CYGIGLGLFNSLSTLLNLALCPSGYEGVFAGYIGALMIVAGMLGALASGIIADKTKKFKLTTLVLYLFALVGT-LMLLTC 352 (480)
T ss_pred HHhhhHHHHHHHHHHhhhccccccCCccccchhHHHHHHHHHHHHHHHHhhhhhhhhHHHHHHHHHHHHHHHH-HHHHHh
Confidence 3345555666555666667888888888888888888888 89999999999999999999999888877665 333333
Q ss_pred HHhhcC
Q 011118 476 YRIRKH 481 (493)
Q Consensus 476 ~~~Rgh 481 (493)
..--+|
T Consensus 353 t~~~~~ 358 (480)
T KOG2563|consen 353 TLFLGD 358 (480)
T ss_pred hccCCc
Confidence 333444
No 271
>TIGR03750 conj_TIGR03750 conjugative transfer region protein, TIGR03750 family. Members of this protein family are found occasionally on plasmids. Usually, however, they are found on the bacterial main chromosome in regions flanked by markers of conjugative transfer and/or transposition.
Probab=26.94 E-value=2.6e+02 Score=24.36 Aligned_cols=25 Identities=28% Similarity=0.585 Sum_probs=19.1
Q ss_pred cCCCchHHHHHHHHHHHHHHHHHHH
Q 011118 323 EGIPAYIIGIARGISATIGIAATIL 347 (493)
Q Consensus 323 ~gls~~~iG~~r~~~av~GllgT~~ 347 (493)
.|++..++++.-++|.+.|+.-.+.
T Consensus 16 rGlT~~El~~~~~~~~~~gl~~g~~ 40 (111)
T TIGR03750 16 RGLTADELGVAAGVGLAAGLVLGLL 40 (111)
T ss_pred cccCHHHHHHHHHHHHHHHHHHHHH
Confidence 5888888888888888888754443
No 272
>PF03209 PUCC: PUCC protein; InterPro: IPR004896 This protein is required for high-level transcription of the PUC operon. It is an integral membrane protein. The family includes other proteins form Rhodobacter eg. bacteriochlorophyll synthase.
Probab=26.91 E-value=8.1e+02 Score=26.27 Aligned_cols=60 Identities=18% Similarity=0.140 Sum_probs=37.5
Q ss_pred HHhhhchhhhhhhhhhhhhhccCCCCcchhHHHHHHHHHH-hhHHHHHHHHHhccCCCCch
Q 011118 395 VATSRLGLWMFDLSVIQQMQDLVPESDRCVVGGVQNSLQS-TMDLMAYTMGIIISNPQDFW 454 (493)
Q Consensus 395 i~~SR~GLw~fDl~~~~l~Qe~vp~~~rG~v~gv~~sl~~-~f~l~~~~~~ii~~~p~~F~ 454 (493)
..+-.+|+=.---+...+.=+.+||++|+++-++--++-- ++-..+.+.+.+.++-++-.
T Consensus 96 F~l~G~G~~~s~T~~lALl~D~~~e~~R~~~v~ivw~Mli~G~iv~ai~~g~lL~~~s~~r 156 (403)
T PF03209_consen 96 FLLYGLGVHASGTSFLALLADLAPEERRPRVVAIVWVMLIVGIIVSAIVFGRLLDPFSPER 156 (403)
T ss_pred HHHHHhhHhHhHHHHHHHHHhcCCHhhhhhhHHHHHHHHHHHHHHHHHHHHHHccccCHHH
Confidence 3333444444444555677889999999999887665533 33666666666666533333
No 273
>PRK03612 spermidine synthase; Provisional
Probab=26.62 E-value=8.9e+02 Score=26.66 Aligned_cols=46 Identities=4% Similarity=-0.155 Sum_probs=24.1
Q ss_pred chhHHHHHHHHHHhh-HHHHHHHH-HhccCCCCchHHHHHHHHHHHHH
Q 011118 422 RCVVGGVQNSLQSTM-DLMAYTMG-IIISNPQDFWKLILISVIVVTLA 467 (493)
Q Consensus 422 rG~v~gv~~sl~~~f-~l~~~~~~-ii~~~p~~F~~l~~~S~~~V~~~ 467 (493)
-|+..|--.+.+.+- -++.++.+ ++.|.-+....+.+.....+.+|
T Consensus 143 ~g~~~g~ly~~ntlGa~~G~l~~~~vLlp~lG~~~t~~~~a~l~~~~a 190 (521)
T PRK03612 143 LGHNVATVLAADYLGALVGGLAFPFLLLPRLGLIRTAALTGSLNLLAA 190 (521)
T ss_pred hhhhhhhhHhHHhHHHHHHHHHHHHHHHHhcchHHHHHHHHHHHHHHH
Confidence 344445455555555 55555555 34455666555555555444444
No 274
>PF09577 Spore_YpjB: Sporulation protein YpjB (SpoYpjB); InterPro: IPR014231 Proteins in thie entry, typified by YpjB, are restricted to a subset of the endospore-forming bacteria which includes Bacillus species, but not species. In Bacillus subtilis, ypjB was found to be part of the sigma-E regulon []. Sigma-E is a sporulation sigma factor that regulates expression in the mother cell compartment. Null mutants of ypjB show a sporulation defect, but this gene is not, however, a part of the endospore formation minimal gene set.
Probab=26.40 E-value=1.3e+02 Score=29.73 Aligned_cols=56 Identities=14% Similarity=0.146 Sum_probs=38.7
Q ss_pred CCCCcchhHHHHHHHHHHhhHHHHHHHHHhccCCCCchHHH-HHHHHHHHHHHHHHHHHHHHhhc
Q 011118 417 VPESDRCVVGGVQNSLQSTMDLMAYTMGIIISNPQDFWKLI-LISVIVVTLAAILYTFHLYRIRK 480 (493)
Q Consensus 417 vp~~~rG~v~gv~~sl~~~f~l~~~~~~ii~~~p~~F~~l~-~~S~~~V~~~~~l~~~~~~~~Rg 480 (493)
-.++.+....-.+..++.+|+=.. .++.+=..+| +++.|++..+++.|..| ||.||
T Consensus 168 ~~~~~~~~l~~le~~l~~lF~~~k-------~d~~dpsl~Wv~l~iG~iIi~tLtYvGw-RKYrg 224 (232)
T PF09577_consen 168 DQKEVQEALEQLEEDLQKLFDGVK-------EDEADPSLIWVMLSIGGIIIATLTYVGW-RKYRG 224 (232)
T ss_pred ChHHHHHHHHHHHHHHHHHhCccc-------ccccccchHHHHHHHHHHHHHHHHHHHH-HHHHH
Confidence 355567778888999999994222 1222212233 47888999999999999 88886
No 275
>TIGR01666 YCCS hypothetical membrane protein, TIGR01666. This model represents a clade of sequences from gamma and beta proteobacteria. These proteins are 700 amino acids long and many have been annotated as putative membrane proteins. The gene from Salmonella has been annotated as a putative efflux transporter. The gene from E. coli has the name yccS.
Probab=22.63 E-value=6e+02 Score=29.31 Aligned_cols=53 Identities=8% Similarity=0.024 Sum_probs=41.1
Q ss_pred HhhHHHHHHHHHHHHHhCCCchHHHHHHHHHHHHHHHhhhccceeeecccchhHH
Q 011118 31 WGARMWEFSVGLYMISVWPDSLLFAAIYGAVESASIALFGPIVGHWVDKLTYVKV 85 (493)
Q Consensus 31 ~Gdr~~~Fa~~L~lv~l~~~sll~~sv~gl~~~l~~llfg~~vG~~vDr~~R~~v 85 (493)
|-+--|.++++.+++.. ....+.-.+|-.+....+.+|...+...|.-+|.+.
T Consensus 3 ~~~~~~~~~lri~ia~~--~~~~~~~~~~~~~~~~~l~LG~ia~al~D~d~~~~~ 55 (704)
T TIGR01666 3 RLNAKVIYTIPIFIALN--GAAVGIWFFDISSQSMPLILGIIAAALVDLDDRLTG 55 (704)
T ss_pred cchhHHHHHHHHHHHHH--HHHHHHHHhCchhHHHHHHHHHHhhccCCCCCcHHH
Confidence 34456778888887765 345556678999999999999999999999876654
Done!