BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 011123
(493 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q8BHY2|NOC4L_MOUSE Nucleolar complex protein 4 homolog OS=Mus musculus GN=Noc4l PE=2
SV=1
Length = 516
Score = 216 bits (551), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 112/279 (40%), Positives = 170/279 (60%), Gaps = 30/279 (10%)
Query: 160 KKMKSKFTKAWITFLRLPLPVDIYKEVLVTLHRAVIPFLSNPIMLCDFLTRSYDIGGVVS 219
K+ K F + W+ FL+ LP+ +YK+VLV +H +++P L+ P ++ DFLT + D+GG +S
Sbjct: 246 KEHKKAFQEMWLGFLKHKLPLSLYKKVLVAMHDSILPHLAQPTLMIDFLTSACDVGGAIS 305
Query: 220 VMALSSLFILMTQHGLEYPNFYEKLYALLVPSIFMAKHRAKFFELLDSCLRSPLLPAYLA 279
++AL+ LFIL+ +H LEYP+FY+KLY LL PSIF K+RA+FF L D L S LPAYL
Sbjct: 306 LLALNGLFILIHKHNLEYPDFYQKLYGLLDPSIFHVKYRARFFHLADLFLSSSHLPAYLV 365
Query: 280 AAFVKKLSRLSILVPPSGALVIMALIHNLLRRHPSINCLLHREDGNETHNDDSKAEKEIV 339
AAF K+L+RL++ PP L+++ LI NLLRRHP+ ++HR G E +
Sbjct: 366 AAFAKRLARLALTAPPEALLMVLPLICNLLRRHPACRVMVHRPQGPE------------L 413
Query: 340 DAATVANISSIKPGIDHFDDEESNPVKSNAMRSSLWEIDTLRHHYCPPVSRFVLSLENDL 399
DA D +D E +P +S A+ S LWE+ TL+ HY P VS+ + L
Sbjct: 414 DA-------------DPYDPTEKDPARSRALESCLWELQTLQQHYHPEVSKAASVINQVL 460
Query: 400 TVRAKTTEINVKDFCSGSYATIFGEEIRRRVKQ-VPLAF 437
+V E+++ + IF +++++++ + VPL F
Sbjct: 461 SV----PEVSIAPLLELTAYEIFEQDLKKKMPESVPLEF 495
>sp|Q5I0I8|NOC4L_RAT Nucleolar complex protein 4 homolog OS=Rattus norvegicus GN=Noc4l
PE=2 SV=1
Length = 516
Score = 216 bits (551), Expect = 3e-55, Method: Compositional matrix adjust.
Identities = 115/300 (38%), Positives = 173/300 (57%), Gaps = 32/300 (10%)
Query: 160 KKMKSKFTKAWITFLRLPLPVDIYKEVLVTLHRAVIPFLSNPIMLCDFLTRSYDIGGVVS 219
K+ + F + W+ FL+ LP+ +YK+VLV +H +++P L+ P ++ DFLT + D+GG +S
Sbjct: 246 KEQRKAFQEMWLGFLKHKLPLSLYKKVLVAMHDSILPHLAQPTLMIDFLTSACDVGGAIS 305
Query: 220 VMALSSLFILMTQHGLEYPNFYEKLYALLVPSIFMAKHRAKFFELLDSCLRSPLLPAYLA 279
++AL+ LFIL+ +H LEYP+FY++LY LL PSIF K+RA+FF L D L S LPAYL
Sbjct: 306 LLALNGLFILIHKHNLEYPDFYQRLYGLLDPSIFHVKYRARFFHLADLFLSSSHLPAYLV 365
Query: 280 AAFVKKLSRLSILVPPSGALVIMALIHNLLRRHPSINCLLHREDGNETHNDDSKAEKEIV 339
AAF K+L+RL++ PP L+++ LI NLLRRHP+ ++HR G E +
Sbjct: 366 AAFAKRLARLALTAPPEALLMVLPLICNLLRRHPACRVMVHRPQGPE------------L 413
Query: 340 DAATVANISSIKPGIDHFDDEESNPVKSNAMRSSLWEIDTLRHHYCPPVSRFVLSLENDL 399
DA D +D E +P +S A+ S LWE+ TL+ HY P VSR + L
Sbjct: 414 DA-------------DPYDPTEKDPARSRALESCLWELQTLQQHYHPEVSRAASVINQAL 460
Query: 400 TVRAKTTEINVKDFCSGSYATIFGEEIRRRVKQ-VPLAFYKTTPTSLFSDSDFAGWTFIC 458
+V E+++ + IF +++++ + + VPL F L D F C
Sbjct: 461 SV----PEVSIAPLLELTAYEIFEQDLKKMMPESVPLEFIPA--KGLLGRQDDLCTQFFC 514
>sp|Q5ZJC7|NOC4L_CHICK Nucleolar complex protein 4 homolog OS=Gallus gallus GN=NOC4L PE=2
SV=1
Length = 508
Score = 216 bits (550), Expect = 3e-55, Method: Compositional matrix adjust.
Identities = 109/275 (39%), Positives = 166/275 (60%), Gaps = 28/275 (10%)
Query: 163 KSKFTKAWITFLRLPLPVDIYKEVLVTLHRAVIPFLSNPIMLCDFLTRSYDIGGVVSVMA 222
K F + W+TFL+ LP +YK+VLV LH +++P+++ P ++ DFLT +Y +GG +S++A
Sbjct: 241 KQAFERMWLTFLKHQLPSGLYKKVLVILHDSILPYMNEPTLMIDFLTVAYGVGGAISLLA 300
Query: 223 LSSLFILMTQHGLEYPNFYEKLYALLVPSIFMAKHRAKFFELLDSCLRSPLLPAYLAAAF 282
L+ LFIL+ QH LEYP+FY+KLY+LL PSI+ K+RA+FF L D L S LPAYL AAF
Sbjct: 301 LNGLFILIHQHNLEYPDFYKKLYSLLDPSIYHVKYRARFFHLADLFLSSSHLPAYLVAAF 360
Query: 283 VKKLSRLSILVPPSGALVIMALIHNLLRRHPSINCLLHREDGNETHNDDSKAEKEIVDAA 342
+K+LSRL++ PP L+++ I NL RRHP+ L+HR +G + ++D
Sbjct: 361 IKRLSRLALTAPPEALLMVIPFICNLFRRHPACKVLMHRPNGPQDLSEDP---------- 410
Query: 343 TVANISSIKPGIDHFDDEESNPVKSNAMRSSLWEIDTLRHHYCPPVSRFVLSLENDLTVR 402
+ E+ P +S A+ SSLWE+ +L++HY P V++ L L+
Sbjct: 411 --------------YIMEQEEPSESRALESSLWELQSLQNHYHPDVAQAAAILNQSLS-- 454
Query: 403 AKTTEINVKDFCSGSYATIFGEEIRRRVKQVPLAF 437
E ++ S + +F +EI++ VPL F
Sbjct: 455 --EIEDDISGLLELSASELFDKEIKKTSANVPLEF 487
>sp|Q6NU91|NOC4B_XENLA Nucleolar complex protein 4 homolog B OS=Xenopus laevis GN=noc4l-b
PE=2 SV=1
Length = 525
Score = 208 bits (529), Expect = 9e-53, Method: Compositional matrix adjust.
Identities = 109/278 (39%), Positives = 162/278 (58%), Gaps = 29/278 (10%)
Query: 160 KKMKSKFTKAWITFLRLPLPVDIYKEVLVTLHRAVIPFLSNPIMLCDFLTRSYDIGGVVS 219
K+ K F + W++FL+ L V +YK+VL+ LH +++P +S P ++ DFLT +YD+GG +S
Sbjct: 257 KEQKRVFERVWMSFLKHQLSVSLYKKVLLILHESILPHMSKPSLMIDFLTAAYDVGGAIS 316
Query: 220 VMALSSLFILMTQHGLEYPNFYEKLYALLVPSIFMAKHRAKFFELLDSCLRSPLLPAYLA 279
++AL+ LFIL+ QH LEYP+FY+KLY+LL PS+F K+RA+FF L + L S LP YL
Sbjct: 317 LLALNGLFILIHQHNLEYPDFYKKLYSLLEPSVFHVKYRARFFHLANLFLSSTHLPVYLV 376
Query: 280 AAFVKKLSRLSILVPPSGALVIMALIHNLLRRHPSINCLLHREDGNETHNDDSKAEKEIV 339
AAF K+L+RL++ PP L+I+ I NL+RRHP+ L+HR + D
Sbjct: 377 AAFAKRLARLALTAPPQVLLMIIPFICNLIRRHPACRVLIHRPSAGDLVTD--------- 427
Query: 340 DAATVANISSIKPGIDHFDDEESNPVKSNAMRSSLWEIDTLRHHYCPPVSRFVLSLENDL 399
P I EE +P KS A+ S LWE++ L+ HY V R N +
Sbjct: 428 ------------PYI----MEEQDPAKSQALESCLWELEVLQQHYHGDVVRAA----NVI 467
Query: 400 TVRAKTTEINVKDFCSGSYATIFGEEIRRRVKQVPLAF 437
+ E +V S +F +E++++ K VPL +
Sbjct: 468 SRALSAQESDVSGLLEMSSCELFDKEMKKKFKSVPLEY 505
>sp|Q4VBT2|NOC4L_DANRE Nucleolar complex protein 4 homolog OS=Danio rerio GN=noc4l PE=2
SV=1
Length = 525
Score = 207 bits (527), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 111/296 (37%), Positives = 173/296 (58%), Gaps = 29/296 (9%)
Query: 146 EKSNNNALSAAIISKKMKSKFTKAWITFLRLPLPVDIYKEVLVTLHRAVIPFLSNPIMLC 205
++S ++ AA + K+ K F + W+ FLR LP +YK++LV LH +++P +S+P ++
Sbjct: 242 QQSKHDDWKAAKL-KEHKRAFEQMWLLFLRYKLPGSMYKKILVILHESILPQMSDPKLMM 300
Query: 206 DFLTRSYDIGGVVSVMALSSLFILMTQHGLEYPNFYEKLYALLVPSIFMAKHRAKFFELL 265
DFL+ +YDIGG +S+ AL+ LF+ + +H L+YP+FY+KLY LL PSIF K+RA+FF L
Sbjct: 301 DFLSAAYDIGGAISLSALNGLFVPIHEHNLDYPDFYKKLYNLLDPSIFHVKYRARFFHLA 360
Query: 266 DSCLRSPLLPAYLAAAFVKKLSRLSILVPPSGALVIMALIHNLLRRHPSINCLLHREDGN 325
+ L S LP YL AAFVK+L+RLS+ PP+ L+++ I NL+RRHPS L+HR
Sbjct: 361 NIFLSSTHLPVYLVAAFVKRLARLSLTAPPTALLILLPFICNLIRRHPSCRVLIHRPSAA 420
Query: 326 ETHNDDSKAEKEIVDAATVANISSIKPGIDHFDDEESNPVKSNAMRSSLWEIDTLRHHYC 385
+ +P D + EE +P + +A+ SSLWEI TL++H+
Sbjct: 421 D------------------------EPCDDPYVMEEEDPAQCHALESSLWEIKTLQNHHH 456
Query: 386 PPVSRFVLSLENDLTVRAKTTEINVKDFCSGSYATIFGEEIRRRVKQVPLAFYKTT 441
P VS+ + L+ + E ++ + + + E++ K VPL F T
Sbjct: 457 PDVSKAATMINEPLSAQ----EEDISELLELTTFELMERELKGEKKTVPLEFDMAT 508
>sp|Q6NRQ2|NOC41_XENLA Nucleolar complex protein 4 homolog A OS=Xenopus laevis GN=noc4l-a
PE=2 SV=1
Length = 526
Score = 201 bits (510), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 102/231 (44%), Positives = 142/231 (61%), Gaps = 25/231 (10%)
Query: 160 KKMKSKFTKAWITFLRLPLPVDIYKEVLVTLHRAVIPFLSNPIMLCDFLTRSYDIGGVVS 219
K K F + W+ FL+ L V +YK+VL+ LH +++P +S P ++ DFLT +YD+GG +S
Sbjct: 257 KDHKRVFERVWMIFLKHQLSVSLYKKVLLILHESILPHMSKPTLMIDFLTAAYDVGGAIS 316
Query: 220 VMALSSLFILMTQHGLEYPNFYEKLYALLVPSIFMAKHRAKFFELLDSCLRSPLLPAYLA 279
++AL+ LFIL+ QH LEYP+FY+KLY+LL PSIF K+RA+FF L + L S LP YL
Sbjct: 317 LLALNGLFILIHQHNLEYPDFYKKLYSLLEPSIFHVKYRARFFHLANMFLSSTHLPVYLV 376
Query: 280 AAFVKKLSRLSILVPPSGALVIMALIHNLLRRHPSINCLLHREDGNETHNDDSKAEKEIV 339
AAF K+L+RL++ PP L+I+ I NL+RRHP+ L+HR
Sbjct: 377 AAFAKRLARLALTAPPQVLLMIIPFICNLIRRHPACRVLIHRPSAG-------------- 422
Query: 340 DAATVANISSIKPGIDHFDDEESNPVKSNAMRSSLWEIDTLRHHYCPPVSR 390
D AT D + EE +P KS A+ SSLWE++ L+ HY V R
Sbjct: 423 DLAT-----------DPYIMEEQDPAKSQALESSLWELEVLQQHYHGDVVR 462
>sp|Q9BVI4|NOC4L_HUMAN Nucleolar complex protein 4 homolog OS=Homo sapiens GN=NOC4L PE=1
SV=1
Length = 516
Score = 192 bits (489), Expect = 4e-48, Method: Compositional matrix adjust.
Identities = 110/279 (39%), Positives = 167/279 (59%), Gaps = 30/279 (10%)
Query: 160 KKMKSKFTKAWITFLRLPLPVDIYKEVLVTLHRAVIPFLSNPIMLCDFLTRSYDIGGVVS 219
K+ + F W++FL+ LP+ +YK+VL+ +H A++P L+ P ++ DFLTR+ D+GG +S
Sbjct: 246 KEHRRVFQAMWLSFLKHKLPLSLYKKVLLIVHDAILPQLAQPTLMIDFLTRACDLGGALS 305
Query: 220 VMALSSLFILMTQHGLEYPNFYEKLYALLVPSIFMAKHRAKFFELLDSCLRSPLLPAYLA 279
++AL+ LFIL+ +H LEYP+FY KLY LL PS+F K+RA+FF L D L S LPAYL
Sbjct: 306 LLALNGLFILIHKHNLEYPDFYRKLYGLLDPSVFHVKYRARFFHLADLFLSSSHLPAYLV 365
Query: 280 AAFVKKLSRLSILVPPSGALVIMALIHNLLRRHPSINCLLHREDGNETHNDDSKAEKEIV 339
AAF K+L+RL++ PP L+++ I NLLRRHP+ L+HR G E +
Sbjct: 366 AAFAKRLARLALTAPPEALLMVLPFICNLLRRHPACRVLVHRPHGPE------------L 413
Query: 340 DAATVANISSIKPGIDHFDDEESNPVKSNAMRSSLWEIDTLRHHYCPPVSRFVLSLENDL 399
DA D +D E +P +S A+ SSLWE+ L+ HY P VS+ + L
Sbjct: 414 DA-------------DPYDPGEEDPAQSRALESSLWELQALQRHYHPEVSKAASVINQAL 460
Query: 400 TVRAKTTEINVKDFCSGSYATIFGEEIRRRVKQ-VPLAF 437
++ E+++ + IF +++++ + VPL F
Sbjct: 461 SM----PEVSIAPLLELTAYEIFERDLKKKGPEPVPLEF 495
>sp|O94372|YG06_SCHPO Uncharacterized protein C1604.06c OS=Schizosaccharomyces pombe
(strain 972 / ATCC 24843) GN=SPBC1604.06c PE=3 SV=1
Length = 485
Score = 189 bits (480), Expect = 4e-47, Method: Compositional matrix adjust.
Identities = 108/284 (38%), Positives = 165/284 (58%), Gaps = 32/284 (11%)
Query: 162 MKSKFTKAWITFLRLPLPVDIYKEVLVTLHRAVIPFLSNPIMLCDFLTRSYDIGGVVSVM 221
+K F ++W++ L LPL V++YK+VL +H+ VIPFL P +L DFLT +Y+ VS++
Sbjct: 226 IKRAFQESWLSALSLPLSVNLYKQVLNVIHKRVIPFLQKPNLLMDFLTDAYNSHHAVSLL 285
Query: 222 ALSSLFILMTQHGLEYPNFYEKLYALLVPSIFMAKHRAKFFELLDSCLRSPLLPAYLAAA 281
AL+ LF LM H L+YP FY KLYALL ++ K R++FF LLD L S LPA L A+
Sbjct: 286 ALNGLFTLMISHNLDYPLFYPKLYALLDRNLLYLKTRSRFFRLLDLFLSSTHLPATLIAS 345
Query: 282 FVKKLSRLSILVPPSGALVIMALIHNLLRRHPSINCLLHREDGNETHNDDSKAEKEIVDA 341
F+K+L+RL++ PP +++ I+N L+RHP+ +LHR
Sbjct: 346 FIKRLARLALTAPPGAIAIVIPFIYNCLQRHPTCMQMLHR-------------------- 385
Query: 342 ATVANISSIKPGIDHFDDEESNPVKSNAMRSSLWEIDTLRHHYCPPVSRFVLSLENDLTV 401
SS + G D FD ++ +P+ + A+ SSLWE+ TL++HY ++ SL + ++
Sbjct: 386 ------SSAESG-DSFDFDQPDPLLTGAIESSLWELSTLQNHYYSNIA----SLASIMSQ 434
Query: 402 RAKTTEINVKDFCSGSYATIFGEEIRRRVK-QVPLAFYKTTPTS 444
+ ++DF YAT+ E+RR +K + P+ F K T S
Sbjct: 435 KFTKPRYELEDFLDHGYATMCDAELRRPLKNEPPIEFEKRTLAS 478
>sp|Q06512|NOC4_YEAST Nucleolar complex protein 4 OS=Saccharomyces cerevisiae (strain
ATCC 204508 / S288c) GN=NOC4 PE=1 SV=1
Length = 552
Score = 189 bits (480), Expect = 5e-47, Method: Compositional matrix adjust.
Identities = 112/315 (35%), Positives = 175/315 (55%), Gaps = 29/315 (9%)
Query: 161 KMKSKFTKAWITFLRLPLPVDIYKEVLVTLHRAVIPFLSNPIMLCDFLTRSYDI------ 214
K KS F K W++ L L + YK +L+ LH+ +IP P L DFLT SY++
Sbjct: 252 KFKSNFEKNWLSLLNGQLSLQQYKSILLILHKRIIPHFHTPTKLMDFLTDSYNLQSSNKN 311
Query: 215 GGVVSVMALSSLFILMTQHGLEYPNFYEKLYALLVPSIFMAKHRAKFFELLDSCLRSPLL 274
GVV ++AL+ LF LM + LEYPNFY KLY ++ P + K+RA+FF L+D L S L
Sbjct: 312 AGVVPILALNGLFELMKRFNLEYPNFYMKLYQIINPDLMHVKYRARFFRLMDVFLSSTHL 371
Query: 275 PAYLAAAFVKKLSRLSILVPPSGALVIMALIHNLLRRHPSINCLLHREDGNETHNDDSKA 334
A+L A+F+KKL+RL++ PPS + ++ I+NL+R+HP NC++ + N
Sbjct: 372 SAHLVASFIKKLARLTLESPPSAIVTVIPFIYNLIRKHP--NCMIMLHNPAFISNPFQTP 429
Query: 335 EKEIVDAATVANISSIKPG-IDHFDDEESNPVKSNAMRSSLWEIDTLRHHYCPPVSRFVL 393
++ VAN+ ++K +D FD ES+P ++A+ SSLWE+ +L HY P V+
Sbjct: 430 DQ-------VANLKTLKENYVDPFDVHESDPELTHALDSSLWELASLMEHYHPNVA---- 478
Query: 394 SLENDLTVRAKTTEINVKDFCSGSYATIFGEEIRRRVKQVPLAFYKTTPTSLFSDSDFAG 453
+L K N++DF +Y ++ E R++K +P ++ T++F + D
Sbjct: 479 TLAKIFAQPFKKLSYNMEDFLDWNYDSLLNAESSRKLKTLPTLEFEAF-TNVFDNED--- 534
Query: 454 WTFICDKTEENSNGN 468
+E +S GN
Sbjct: 535 -----GDSEASSQGN 544
>sp|P41843|YO93_CAEEL Uncharacterized protein T20B12.3 OS=Caenorhabditis elegans
GN=T20B12.3 PE=3 SV=1
Length = 504
Score = 114 bits (286), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 65/229 (28%), Positives = 114/229 (49%), Gaps = 25/229 (10%)
Query: 162 MKSKFTKAWITFLRLPLPVDIYKEVLVTLHRAVIPFLSNPIMLCDFLTRSYDIGGVVSVM 221
+ + + W+ + + + +++ + + VI L P DF + +D ++
Sbjct: 190 ISTDYDNVWMAVMNGKISDKLTLKLIPYITQNVISKLKAPFKSADFFFKMFDKTDYHGIL 249
Query: 222 ALSSLFILMTQHGLEYPNFYEKLYALLVPSIFMAKHRAKFFELLDSCLRSPLLPAYLAAA 281
+L ++F L+++H EYP FY+K+Y+L PS+ + LLDS L S LP Y+ A+
Sbjct: 250 SLGAIFRLISEHNFEYPKFYDKVYSLTNPSLLYMSQKESILTLLDSFLSSTHLPTYITAS 309
Query: 282 FVKKLSRLSILVPPSGALVIMALIHNLLRRHPSINCLLHREDGNETHNDDSKAEKEIVDA 341
F+K+LSR +L P I+ LI NL+ RHP+ + L+HRE ++D
Sbjct: 310 FLKRLSRCLLLAPIDAQEPILGLIRNLVIRHPNCSELVHREVPQTLYDDP---------- 359
Query: 342 ATVANISSIKPGIDHFDDEESNPVKSNAMRSSLWEIDTLRHHYCPPVSR 390
FD++E++ K+ A+ SSLWE+ L+ H+ V +
Sbjct: 360 ---------------FDNDETDLHKTRALESSLWEMKLLQCHWNQSVRK 393
>sp|Q03701|CEBPZ_HUMAN CCAAT/enhancer-binding protein zeta OS=Homo sapiens GN=CEBPZ PE=1
SV=3
Length = 1054
Score = 51.2 bits (121), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 54/214 (25%), Positives = 90/214 (42%), Gaps = 37/214 (17%)
Query: 218 VSVMALSSLFILMTQHGLEYPNFYEKLY-ALLVPSIFMAKHRAKFFELLDSCLRSPLLPA 276
SV AL LF +M +Y LY +L P + +A F L+ L++ ++
Sbjct: 522 TSVQALMLLFQVMNSQQTISDRYYTALYRKMLDPGLMTCSKQAMFLNLVYKSLKADIVLR 581
Query: 277 YLAAAFVKKLSRLSILVPPSGALVIMALIHNLLRRHPSINCLL--HREDGNETH----ND 330
+ A FVK+L +++ P + L+ +L+ P + L H E +E + ND
Sbjct: 582 RVKA-FVKRLLQVTCQQMPPFICGALYLVSEILKAKPGLRSQLDDHPESDDEENFIDAND 640
Query: 331 DSKAEK--------EIV------DAATVANISSIKPGID---HFDDEES----------- 362
D EK EIV + ++ + KP + HFD+ +
Sbjct: 641 DEDMEKFTDADKETEIVKKLETEETVPETDVETKKPEVASWVHFDNLKGGKQLNKYDPFS 700
Query: 363 -NPVKSNAMRSSLWEIDTLRHHYCPPVSRFVLSL 395
NP+ A +SLWE+ L H+ P V+ F ++
Sbjct: 701 RNPLFCGAENTSLWELKKLSVHFHPSVALFAKTI 734
>sp|Q07896|NOC3_YEAST Nucleolar complex-associated protein 3 OS=Saccharomyces cerevisiae
(strain ATCC 204508 / S288c) GN=NOC3 PE=1 SV=1
Length = 663
Score = 49.3 bits (116), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 33/117 (28%), Positives = 48/117 (41%), Gaps = 27/117 (23%)
Query: 279 AAAFVKKLSRLSILVPPSGALVIMALIHNLLRRHPSINCLLHREDGNETHNDDSKAEKEI 338
A AF K+L P ++ I+ I L+ R+P I+ L ED
Sbjct: 565 ATAFTKRLYMCISHTPEKTSIAILKFIDKLMNRYPEISGLYSSED--------------- 609
Query: 339 VDAATVANISSIKPGIDHFDDEESNPVKSNAMRSSLWEIDTLRHHYCPPVSRFVLSL 395
+ G HF E NP +SN ++LW+ L HYCP V++ + SL
Sbjct: 610 ------------RIGNGHFIMEADNPSRSNPEAATLWDNALLEKHYCPVVTKGLRSL 654
>sp|P53569|CEBPZ_MOUSE CCAAT/enhancer-binding protein zeta OS=Mus musculus GN=Cebpz PE=2
SV=2
Length = 1052
Score = 49.3 bits (116), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 51/215 (23%), Positives = 85/215 (39%), Gaps = 38/215 (17%)
Query: 218 VSVMALSSLFILMTQHGLEYPNFYEKLY-ALLVPSIFMAKHRAKFFELLDSCLRSPLLPA 276
SV AL LF +M +Y LY +L P + +A F L+ L++ ++
Sbjct: 522 TSVQALMLLFQVMNSQQTISDRYYTALYRKMLDPGLTTCSKQAMFLNLIYKSLKADIMLR 581
Query: 277 YLAAAFVKKLSRLSILVPPSGALVIMALIHNLLRRHPSINCLL--HREDGNETHND---- 330
+ A FVK+L +++ P + L+ +L+ P + L H E E D
Sbjct: 582 RVKA-FVKRLLQVTCTQMPPFICGALYLVSEILKAKPDLRSQLDDHPESDEENFVDVGDD 640
Query: 331 ----------------------------DSKAEKEIVDAATVANISSIKPG--IDHFDDE 360
+S AE E AA+ + ++K G I +D
Sbjct: 641 SDDEKFTDADKGTATDAVKEVESKETEPESSAEAEKPKAASWVHFDNLKGGKQIKTYDPF 700
Query: 361 ESNPVKSNAMRSSLWEIDTLRHHYCPPVSRFVLSL 395
NP+ A ++LWE+ L H+ P V+ F ++
Sbjct: 701 SRNPLFCGAENTTLWELKKLSEHFHPSVALFAKTI 735
>sp|Q5R952|NOC3L_PONAB Nucleolar complex protein 3 homolog OS=Pongo abelii GN=NOC3L PE=2
SV=1
Length = 800
Score = 49.3 bits (116), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 52/215 (24%), Positives = 87/215 (40%), Gaps = 40/215 (18%)
Query: 191 HRAVIPFLSNPIMLCDFLTRSYDIGGVVSVMALSSLFILMTQHG----LEYPNFYEKLYA 246
H + F + +++ L S D+ S+ + + F +++ G ++ FY LY
Sbjct: 527 HLINVEFFDDLLVVLHTLIESGDLSYKESLHCVQTAFHILSGQGDVLNIDPMKFYTHLYK 586
Query: 247 LLVPSIFMAKHRAKFFELLDSCL------RSPLLPAYLAAAFVKKLSRLSILVPPSGALV 300
L A + E++ CL R + A AF+K+L L++ V P+ ++
Sbjct: 587 TLFK--LHAGATNEGVEIVLQCLDVMLTKRRKQVSQQRALAFIKRLCTLALHVLPNSSIG 644
Query: 301 IMALIHNLLRRHPSINCLLHREDGNETHNDDSKAEKEIVDAATVANISSIKPGIDHFDDE 360
I+A L+ P + LL DS+++ G F E
Sbjct: 645 ILATTRILMHTFPKTDLLL-----------DSESQ-----------------GSGVFLPE 676
Query: 361 ESNPVKSNAMRSSLWEIDTLRHHYCPPVSRFVLSL 395
P NA ++LWE+ LR HY P V RF + L
Sbjct: 677 LDEPEYCNAQNTALWELHALRRHYHPIVQRFAVHL 711
>sp|Q8WTT2|NOC3L_HUMAN Nucleolar complex protein 3 homolog OS=Homo sapiens GN=NOC3L PE=1
SV=1
Length = 800
Score = 48.1 bits (113), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 52/215 (24%), Positives = 86/215 (40%), Gaps = 40/215 (18%)
Query: 191 HRAVIPFLSNPIMLCDFLTRSYDIGGVVSVMALSSLFILMTQHG----LEYPNFYEKLYA 246
H + F + +++ L S D+ S+ + + F +++ G ++ FY LY
Sbjct: 527 HLINVEFFDDLLVVLHTLIESGDLSYQESLHCVQTAFHILSGQGDVLNIDPLKFYTHLYK 586
Query: 247 LLVPSIFMAKHRAKFFELLDSCL------RSPLLPAYLAAAFVKKLSRLSILVPPSGALV 300
L A + E++ CL R + A AF+K+L L++ V P+ ++
Sbjct: 587 TLFK--LHAGATNEGVEIVLQCLDVMLTKRRKQVSQQRALAFIKRLCTLALHVLPNSSIG 644
Query: 301 IMALIHNLLRRHPSINCLLHREDGNETHNDDSKAEKEIVDAATVANISSIKPGIDHFDDE 360
I+A L+ P + LL DS+++ G F E
Sbjct: 645 ILATTRILMHTFPKTDLLL-----------DSESQ-----------------GSGVFLPE 676
Query: 361 ESNPVKSNAMRSSLWEIDTLRHHYCPPVSRFVLSL 395
P NA ++LWE+ LR HY P V RF L
Sbjct: 677 LDEPEYCNAQNTALWELHALRRHYHPIVQRFAAHL 711
>sp|Q91Y26|NOC3L_CRIGR Nucleolar complex protein 3 homolog OS=Cricetulus griseus GN=NOC3L
PE=2 SV=1
Length = 800
Score = 47.0 bits (110), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 51/215 (23%), Positives = 84/215 (39%), Gaps = 40/215 (18%)
Query: 191 HRAVIPFLSNPIMLCDFLTRSYDIGGVVSVMALSSLFILMTQHG----LEYPNFYEKLYA 246
H + F + +++ L S D+ S+ + + F +++ G ++ FY LY
Sbjct: 527 HLINVEFFDDLLVVLHTLIESGDLSYQESLHCVQTAFHILSGQGDVLNIDPMKFYTHLYK 586
Query: 247 LLVPSIFMAKHRAKFFELLDSCL------RSPLLPAYLAAAFVKKLSRLSILVPPSGALV 300
L A E++ CL R + A AF+K+L L++ V P+ ++
Sbjct: 587 TLFK--LHAGATNDGIEIVLHCLDVMLSKRRKQVSHQRALAFIKRLCTLALQVLPNSSIG 644
Query: 301 IMALIHNLLRRHPSINCLLHREDGNETHNDDSKAEKEIVDAATVANISSIKPGIDHFDDE 360
++A L+ P + LL NE+ G F E
Sbjct: 645 LLATTRILMHTFPRTDLLL----DNESQ------------------------GSGVFLPE 676
Query: 361 ESNPVKSNAMRSSLWEIDTLRHHYCPPVSRFVLSL 395
P NA ++LWE+ LR HY P V RF + L
Sbjct: 677 LEEPEYCNAQNTALWELHALRRHYHPVVQRFAVHL 711
>sp|Q8VI84|NOC3L_MOUSE Nucleolar complex protein 3 homolog OS=Mus musculus GN=Noc3l PE=2
SV=2
Length = 807
Score = 45.8 bits (107), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 34/117 (29%), Positives = 49/117 (41%), Gaps = 28/117 (23%)
Query: 279 AAAFVKKLSRLSILVPPSGALVIMALIHNLLRRHPSINCLLHREDGNETHNDDSKAEKEI 338
A AF+K+L L++ V P+ ++ ++A L+ P + LL NE+
Sbjct: 622 ALAFIKRLCTLALQVLPNSSIGLLATTRILMHTFPRTDLLL----DNESQ---------- 667
Query: 339 VDAATVANISSIKPGIDHFDDEESNPVKSNAMRSSLWEIDTLRHHYCPPVSRFVLSL 395
G F E P NA ++LWE+ TLR HY P V RF L
Sbjct: 668 --------------GSGVFLPELEEPEYCNAQNTALWELHTLRRHYHPIVRRFAAHL 710
>sp|Q12176|MAK21_YEAST Ribosome biogenesis protein MAK21 OS=Saccharomyces cerevisiae
(strain ATCC 204508 / S288c) GN=MAK21 PE=1 SV=1
Length = 1025
Score = 44.3 bits (103), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 54/234 (23%), Positives = 93/234 (39%), Gaps = 18/234 (7%)
Query: 218 VSVMALSSLFILMTQHGLEYPNFYEKLY-ALLVPSIFMAKHRAKFFELLDSCLRSPLLPA 276
S+ AL + + + L +Y LY +L P + + + + LL L+ L
Sbjct: 596 TSIQALVLINQVTVKAKLNSDRYYRTLYESLFDPRLVNSSKQGIYLNLLYKSLKQDALNV 655
Query: 277 YLAAAFVKKLSRLSILVPPSGALV-IMALIHNLLRRHPSINCLLHREDGNETHNDDSKAE 335
AFVK++ ++ G + L+ L + P I LL + + D++ E
Sbjct: 656 ERVEAFVKRILQVCSHWLNVGTITGFFFLLIQLAKTVPQIKNLLTNTPVDYEYESDAEEE 715
Query: 336 KEIVDAATVANISSIKPGIDHFDDEESNPVKSNAMRSSLWEIDTLRHHYCPPVSRFVLSL 395
+ D IK +D + +P +NA +SSLWEI+ +H+ P V +
Sbjct: 716 QGDKD---------IKRK--EYDGRKRDPKFANAEKSSLWEINNFINHFHPTVKTYA--- 761
Query: 396 ENDLTVRAKTTEINVKDFCSGSYATIFGEEIRRRVKQVPLAFYKTTPTSLFSDS 449
+ V +T +I D + + + R KQ A + LFS S
Sbjct: 762 --NAYVTGETEQIAKPDLGLFTLSHFLDRFVYRSAKQTNTARGTSIMQPLFSGS 813
>sp|O36021|YEK9_SCHPO Uncharacterized protein C4F10.09c OS=Schizosaccharomyces pombe
(strain 972 / ATCC 24843) GN=SPAC4F10.09c PE=1 SV=1
Length = 860
Score = 43.9 bits (102), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 53/205 (25%), Positives = 84/205 (40%), Gaps = 29/205 (14%)
Query: 218 VSVMALSSLFILMTQHGLEYPNFYEKLY-ALLVPSIFMAKHRAKFFELL-DSCLRSPLLP 275
SV L +F +Y+ LY +LL P + + ++ + LL S + +P
Sbjct: 409 TSVQVLMLIFQASASRDFISDRYYKSLYESLLDPRLTTSSKQSLYLNLLYKSLIIDNNIP 468
Query: 276 AYLAAAFVKKLSRLSILVPPSGALVIMALIHNLL-----RRHPSINCLLHREDGNETH-- 328
AF+K++ ++S P + ++H L+ R N +H DG+E
Sbjct: 469 R--VRAFIKRMVQVSAWQQPPLVTGLFHVMHQLVIATTALRSMFTNAEIHDFDGDEEEVF 526
Query: 329 ---NDDSKAEKEIVD--------------AATVANIS-SIKPGIDHFDDEESNPVKSNAM 370
+D +E + VD A V N+S S K +D + +P SNA
Sbjct: 527 KDVEEDDVSEDQKVDSDKDGKLSDKQSHSAYVVGNVSVSTKKEHLSYDGRKRDPQYSNAD 586
Query: 371 RSSLWEIDTLRHHYCPPVSRFVLSL 395
S LWEI +H+ P VS SL
Sbjct: 587 GSCLWEIHPFLNHFHPTVSLLAKSL 611
>sp|Q5XGZ8|NOC3L_XENLA Nucleolar complex protein 3 homolog OS=Xenopus laevis GN=noc3l PE=2
SV=1
Length = 795
Score = 40.0 bits (92), Expect = 0.047, Method: Compositional matrix adjust.
Identities = 34/117 (29%), Positives = 50/117 (42%), Gaps = 28/117 (23%)
Query: 279 AAAFVKKLSRLSILVPPSGALVIMALIHNLLRRHPSINCLLHREDGNETHNDDSKAEKEI 338
A AF+K+LS L++ V P ++ I++ L++ P + LL + DS+
Sbjct: 621 ALAFIKRLSTLALHVLPDSSIGILSTNRVLMQTFPKTDLLL---------DSDSQGS--- 668
Query: 339 VDAATVANISSIKPGIDHFDDEESNPVKSNAMRSSLWEIDTLRHHYCPPVSRFVLSL 395
GI + E P NA S+LWE+ TL HY P V F L
Sbjct: 669 --------------GI--YLPELDEPEYCNAQNSALWELHTLMRHYHPVVQIFAAHL 709
>sp|P91136|NOC3L_CAEEL Nucleolar complex protein 3 homolog OS=Caenorhabditis elegans
GN=C37H5.5 PE=3 SV=3
Length = 778
Score = 38.5 bits (88), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 33/150 (22%), Positives = 72/150 (48%), Gaps = 20/150 (13%)
Query: 191 HRAVIPFLSNPIMLCDFLTRSYDIGGVVSVMALSSLFILMTQHG----LEYPNFYEKLYA 246
H I F + + + + ++ ++ + + ++++F++++ G ++ FY Y
Sbjct: 513 HLLSIEFYEDIVSTMENMVQNENLKSLDQLHCINTVFVILSGDGQLLNIDPSKFYRLAYR 572
Query: 247 LL--VP----------SIFMAKHRAKFFELLDSCLRSPLLPAYLAAAFVKKLSRLSILVP 294
+L +P I MA AK E + +R +P AAFVK+L ++ ++
Sbjct: 573 VLNHLPFEKRPEQRKNQIIMA---AKTLETM-LVIRRKAVPLSRVAAFVKRLLSIATVLD 628
Query: 295 PSGALVIMALIHNLLRRHPSINCLLHREDG 324
AL I++L+ +L HP ++ ++ E+G
Sbjct: 629 DFPALCIVSLVRSLFIAHPKLSSMIEDEEG 658
>sp|Q8EC50|EX7L_SHEON Exodeoxyribonuclease 7 large subunit OS=Shewanella oneidensis
(strain MR-1) GN=xseA PE=3 SV=1
Length = 445
Score = 37.0 bits (84), Expect = 0.40, Method: Compositional matrix adjust.
Identities = 32/105 (30%), Positives = 48/105 (45%), Gaps = 9/105 (8%)
Query: 245 YALLVPSIFMAKHR--AKFFELLDSCLRS-PLLPAYLAAAFVKKLSRLSILVPPSGALVI 301
Y LL+ S+ A A+ FE L L + L A A K + R+ ++ P+GA I
Sbjct: 94 YQLLIESMLPAGDGLLAQQFEALKMKLAALGLFAADTKRALPKNIQRIGVITSPTGA-AI 152
Query: 302 MALIHNLLRRHPSINCLLHREDGNETHNDDSKAEKEIVDAATVAN 346
++H L RR PSI +++ T A+ I A +AN
Sbjct: 153 RDVLHVLARRDPSIEVIIY-----PTQVQGENADINICQAINIAN 192
>sp|Q0HKV4|EX7L_SHESM Exodeoxyribonuclease 7 large subunit OS=Shewanella sp. (strain
MR-4) GN=xseA PE=3 SV=1
Length = 448
Score = 36.2 bits (82), Expect = 0.58, Method: Compositional matrix adjust.
Identities = 32/105 (30%), Positives = 47/105 (44%), Gaps = 9/105 (8%)
Query: 245 YALLVPSIFMAKHR--AKFFELLDSCLRSP-LLPAYLAAAFVKKLSRLSILVPPSGALVI 301
Y LL+ S+ A A+ FE L L + L A K + R+ ++ PSGA I
Sbjct: 94 YQLLIESMLPAGDGLLAQQFEALKMKLAAQGLFAADTKRQLPKNIQRIGVITSPSGA-AI 152
Query: 302 MALIHNLLRRHPSINCLLHREDGNETHNDDSKAEKEIVDAATVAN 346
++H L RR PSI +++ T A+ I A +AN
Sbjct: 153 RDVLHVLARRDPSIEVIIY-----PTQVQGESADLNICQAINIAN 192
>sp|A0KUK0|EX7L_SHESA Exodeoxyribonuclease 7 large subunit OS=Shewanella sp. (strain
ANA-3) GN=xseA PE=3 SV=1
Length = 448
Score = 36.2 bits (82), Expect = 0.60, Method: Compositional matrix adjust.
Identities = 31/105 (29%), Positives = 47/105 (44%), Gaps = 9/105 (8%)
Query: 245 YALLVPSIFMAKHR--AKFFELLDSCLRSP-LLPAYLAAAFVKKLSRLSILVPPSGALVI 301
Y LL+ S+ A A+ FE L L + L A K + R+ ++ P+GA I
Sbjct: 94 YQLLIESMLPAGDGLLAQQFEALKMKLAAQGLFAADTKRQLPKNIQRIGVITSPTGA-AI 152
Query: 302 MALIHNLLRRHPSINCLLHREDGNETHNDDSKAEKEIVDAATVAN 346
++H L RR PSI +++ T A+ I A +AN
Sbjct: 153 RDVLHVLARRDPSIEVIIY-----PTQVQGENADMNICQAINIAN 192
>sp|Q61LN7|NOC3L_CAEBR Nucleolar complex protein 3 homolog OS=Caenorhabditis briggsae
GN=CBG08826 PE=3 SV=1
Length = 779
Score = 36.2 bits (82), Expect = 0.63, Method: Compositional matrix adjust.
Identities = 33/150 (22%), Positives = 70/150 (46%), Gaps = 20/150 (13%)
Query: 191 HRAVIPFLSNPIMLCDFLTRSYDIGGVVSVMALSSLFILMTQHG----LEYPNFYEKLYA 246
H I F + + + + ++ ++ + + ++++F++++ G ++ FY Y
Sbjct: 514 HLLSIEFYEDIVSTMENMVQNENLKPLDQLHCINTVFVILSGDGQLLNIDPSKFYRLAYR 573
Query: 247 LL--VP----------SIFMAKHRAKFFELLDSCLRSPLLPAYLAAAFVKKLSRLSILVP 294
+L P I MA AK E + R +P AAFVK+L ++ ++
Sbjct: 574 VLNHFPFEKRPEQRKNQIVMA---AKTLETM-LVTRRKAVPLSRVAAFVKRLLSIATVLD 629
Query: 295 PSGALVIMALIHNLLRRHPSINCLLHREDG 324
AL I++L+ +L HP ++ ++ E+G
Sbjct: 630 DFPALCIVSLVRSLFIAHPKLSSMIEDEEG 659
>sp|Q0HX52|EX7L_SHESR Exodeoxyribonuclease 7 large subunit OS=Shewanella sp. (strain
MR-7) GN=xseA PE=3 SV=1
Length = 448
Score = 35.4 bits (80), Expect = 0.94, Method: Compositional matrix adjust.
Identities = 31/105 (29%), Positives = 47/105 (44%), Gaps = 9/105 (8%)
Query: 245 YALLVPSIFMAKHR--AKFFELLDSCLRSP-LLPAYLAAAFVKKLSRLSILVPPSGALVI 301
Y LL+ S+ A A+ FE L L + L A K + R+ ++ P+GA I
Sbjct: 94 YQLLIESMLPAGDGLLAQQFEALKMKLAAQGLFAADTKRQLPKNIQRIGVITSPTGA-AI 152
Query: 302 MALIHNLLRRHPSINCLLHREDGNETHNDDSKAEKEIVDAATVAN 346
++H L RR PSI +++ T A+ I A +AN
Sbjct: 153 RDVLHVLARRDPSIEVIIY-----PTQVQGESADLNICQAINIAN 192
>sp|Q6DRN3|NOC3L_DANRE Nucleolar complex protein 3 homolog OS=Danio rerio GN=noc3l PE=2
SV=1
Length = 800
Score = 34.7 bits (78), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 42/178 (23%), Positives = 66/178 (37%), Gaps = 54/178 (30%)
Query: 279 AAAFVKKLSRLSILVPPSGALVIMALIHNLLRRHPSINCLLHREDGNETHNDDSKAEKEI 338
A AF+K+L+ +++ + P + I+A L++ P + LL NET
Sbjct: 623 AQAFLKRLNTVALHLLPDSCVGILAANRMLMQTFPKCDILL----DNETQ---------- 668
Query: 339 VDAATVANISSIKPGIDHFDDEESNPVKSNAMRSSLWEIDTLRHHYCPPVSRFVLSLEND 398
G + E P N ++LWE+ L+ HY P V +F L
Sbjct: 669 --------------GSGVYLPELDVPEYCNPQNTALWELHLLKSHYHPVVRKFAAHL--- 711
Query: 399 LTVRAKTTEINVKDFCSGSYATIFGEEIRRRVKQVPLAFYKTTPTSLFSDSDFAGWTF 456
++ +E GS A G E+ RR +P LF D +F
Sbjct: 712 --MKGAPSE--------GSGA--LGVELSRR-----------SPLQLFEDYSVKDMSF 746
>sp|A6WQP2|EX7L_SHEB8 Exodeoxyribonuclease 7 large subunit OS=Shewanella baltica (strain
OS185) GN=xseA PE=3 SV=1
Length = 448
Score = 34.3 bits (77), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 30/105 (28%), Positives = 47/105 (44%), Gaps = 9/105 (8%)
Query: 245 YALLVPSIFMAKHR--AKFFELLDSCLRSP-LLPAYLAAAFVKKLSRLSILVPPSGALVI 301
Y LL+ S+ A A+ F+ L L + L A K + R+ ++ P+GA I
Sbjct: 94 YQLLIESMLPAGDGLLAQQFDALKMKLAAEGLFAADTKRPLPKNIQRIGVITSPTGA-AI 152
Query: 302 MALIHNLLRRHPSINCLLHREDGNETHNDDSKAEKEIVDAATVAN 346
++H L RR PSI +++ T A + I A +AN
Sbjct: 153 RDVLHVLARRDPSIEVIIY-----PTQVQGETAAQSICQAINIAN 192
>sp|A3D6V4|EX7L_SHEB5 Exodeoxyribonuclease 7 large subunit OS=Shewanella baltica (strain
OS155 / ATCC BAA-1091) GN=xseA PE=3 SV=1
Length = 448
Score = 34.3 bits (77), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 30/105 (28%), Positives = 47/105 (44%), Gaps = 9/105 (8%)
Query: 245 YALLVPSIFMAKHR--AKFFELLDSCLRSP-LLPAYLAAAFVKKLSRLSILVPPSGALVI 301
Y LL+ S+ A A+ F+ L L + L A K + R+ ++ P+GA I
Sbjct: 94 YQLLIESMLPAGDGLLAQQFDALKMKLAAEGLFAADTKRPLPKNIQRIGVITSPTGA-AI 152
Query: 302 MALIHNLLRRHPSINCLLHREDGNETHNDDSKAEKEIVDAATVAN 346
++H L RR PSI +++ T A + I A +AN
Sbjct: 153 RDVLHVLARRDPSIEVIIY-----PTQVQGETAAQSICQAINIAN 192
>sp|A9KWW8|EX7L_SHEB9 Exodeoxyribonuclease 7 large subunit OS=Shewanella baltica (strain
OS195) GN=xseA PE=3 SV=1
Length = 448
Score = 34.3 bits (77), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 30/105 (28%), Positives = 47/105 (44%), Gaps = 9/105 (8%)
Query: 245 YALLVPSIFMAKHR--AKFFELLDSCLRSP-LLPAYLAAAFVKKLSRLSILVPPSGALVI 301
Y LL+ S+ A A+ F+ L L + L A K + R+ ++ P+GA I
Sbjct: 94 YQLLIESMLPAGDGLLAQQFDALKMKLAAEGLFAADTKRPLPKNIQRIGVITSPTGA-AI 152
Query: 302 MALIHNLLRRHPSINCLLHREDGNETHNDDSKAEKEIVDAATVAN 346
++H L RR PSI +++ T A + I A +AN
Sbjct: 153 RDVLHVLARRDPSIEVIIY-----PTQVQGETAAQSICQAINIAN 192
>sp|B8E9T2|EX7L_SHEB2 Exodeoxyribonuclease 7 large subunit OS=Shewanella baltica (strain
OS223) GN=xseA PE=3 SV=1
Length = 448
Score = 34.3 bits (77), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 30/105 (28%), Positives = 47/105 (44%), Gaps = 9/105 (8%)
Query: 245 YALLVPSIFMAKHR--AKFFELLDSCLRSP-LLPAYLAAAFVKKLSRLSILVPPSGALVI 301
Y LL+ S+ A A+ F+ L L + L A K + R+ ++ P+GA I
Sbjct: 94 YQLLIESMLPAGDGLLAQQFDALKMKLAAEGLFAADTKRRLPKNIQRIGVITSPTGA-AI 152
Query: 302 MALIHNLLRRHPSINCLLHREDGNETHNDDSKAEKEIVDAATVAN 346
++H L RR PSI +++ T A + I A +AN
Sbjct: 153 RDVLHVLARRDPSIEVIIY-----PTQVQGETAAQSICQAINIAN 192
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.317 0.132 0.378
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 176,137,147
Number of Sequences: 539616
Number of extensions: 6980625
Number of successful extensions: 21708
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 26
Number of HSP's successfully gapped in prelim test: 56
Number of HSP's that attempted gapping in prelim test: 21570
Number of HSP's gapped (non-prelim): 159
length of query: 493
length of database: 191,569,459
effective HSP length: 122
effective length of query: 371
effective length of database: 125,736,307
effective search space: 46648169897
effective search space used: 46648169897
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 63 (28.9 bits)