Query 011125
Match_columns 493
No_of_seqs 140 out of 155
Neff 4.4
Searched_HMMs 29240
Date Mon Mar 25 21:19:36 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/011125.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/011125hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3eqn_A Glucan 1,3-beta-glucosi 100.0 2.1E-30 7.2E-35 284.4 27.3 236 23-323 16-265 (758)
2 2pyg_A Poly(beta-D-mannuronate 99.9 1.6E-23 5.6E-28 210.1 24.7 279 58-373 2-333 (377)
3 3jur_A EXO-poly-alpha-D-galact 99.9 1E-22 3.4E-27 213.7 21.3 228 55-311 24-329 (448)
4 3gq8_A Preneck appendage prote 99.8 8.7E-20 3E-24 197.4 25.2 320 55-406 19-408 (609)
5 1rmg_A Rgase A, rhamnogalactur 99.8 6.2E-19 2.1E-23 183.4 29.3 223 55-311 17-253 (422)
6 2uvf_A Exopolygalacturonase; G 99.8 2.4E-19 8.1E-24 194.1 25.6 287 55-373 153-532 (608)
7 3gqn_A Preneck appendage prote 99.8 4.4E-19 1.5E-23 195.3 25.1 319 55-405 19-407 (772)
8 1h80_A IOTA-carrageenase; hydr 99.8 1.6E-17 5.4E-22 175.3 22.9 158 55-243 18-186 (464)
9 1bhe_A PEHA, polygalacturonase 99.7 1.5E-16 5.2E-21 162.4 24.1 241 57-335 13-304 (376)
10 2vbk_A Tailspike-protein; vira 99.7 1.7E-14 5.7E-19 151.2 25.4 158 55-242 48-229 (514)
11 2x6w_A Tail spike protein; vir 99.6 1.9E-15 6.6E-20 163.3 16.8 191 55-298 48-287 (600)
12 2iq7_A Endopolygalacturonase; 99.5 2.3E-12 8E-17 130.2 20.9 219 73-334 6-254 (339)
13 1hg8_A Endopolygalacturonase; 99.5 2.1E-12 7.3E-17 131.2 20.7 223 74-335 7-267 (349)
14 1nhc_A Polygalacturonase I; be 99.4 8.7E-12 3E-16 125.9 20.5 220 73-335 6-254 (336)
15 1czf_A Polygalacturonase II; b 99.4 8.9E-12 3E-16 127.4 17.8 217 75-335 35-280 (362)
16 1ia5_A Polygalacturonase; glyc 99.4 1.1E-11 3.7E-16 125.5 17.8 219 73-334 10-258 (339)
17 2inu_A Insulin fructotransfera 99.4 6.8E-11 2.3E-15 123.1 22.3 247 55-347 11-298 (410)
18 1x0c_A Isopullulanase; glycosi 99.3 8.8E-12 3E-16 134.0 14.3 210 59-299 143-400 (549)
19 1k5c_A Endopolygalacturonase; 99.3 3.5E-11 1.2E-15 121.9 16.0 216 75-335 8-251 (335)
20 1ogo_X Dextranase; hydrolase, 99.2 3E-10 1E-14 122.9 20.8 168 101-299 229-438 (574)
21 3eqn_A Glucan 1,3-beta-glucosi 99.1 8.2E-10 2.8E-14 122.1 16.6 185 55-266 397-605 (758)
22 1ru4_A Pectate lyase, PEL9A; p 98.4 1E-05 3.4E-10 84.0 17.2 163 186-353 116-298 (400)
23 1dbg_A Chondroitinase B; beta 98.2 6.4E-05 2.2E-09 80.4 20.6 32 75-122 31-62 (506)
24 2pyg_A Poly(beta-D-mannuronate 98.2 1.4E-05 4.7E-10 80.1 13.4 160 199-373 171-360 (377)
25 1gq8_A Pectinesterase; hydrola 97.8 0.00062 2.1E-08 68.9 17.1 196 77-326 21-241 (319)
26 1xg2_A Pectinesterase 1; prote 97.7 0.00084 2.9E-08 67.8 16.6 196 77-326 17-237 (317)
27 3jur_A EXO-poly-alpha-D-galact 97.3 0.012 3.9E-07 62.0 19.4 168 182-373 219-413 (448)
28 1hg8_A Endopolygalacturonase; 97.3 0.013 4.3E-07 59.5 18.3 104 182-300 133-263 (349)
29 2inu_A Insulin fructotransfera 97.2 0.013 4.4E-07 61.4 18.2 142 211-373 143-299 (410)
30 1rmg_A Rgase A, rhamnogalactur 97.2 0.018 6.1E-07 59.9 19.1 144 199-373 126-274 (422)
31 3gq8_A Preneck appendage prote 97.2 0.019 6.5E-07 62.8 19.7 183 182-384 103-355 (609)
32 1ia5_A Polygalacturonase; glyc 97.2 0.0091 3.1E-07 60.3 15.9 93 201-297 105-199 (339)
33 2iq7_A Endopolygalacturonase; 97.2 0.0082 2.8E-07 60.5 15.6 80 201-284 101-181 (339)
34 1ru4_A Pectate lyase, PEL9A; p 96.9 0.0039 1.3E-07 64.7 11.1 148 207-373 113-292 (400)
35 1nhc_A Polygalacturonase I; be 96.9 0.022 7.4E-07 57.4 16.3 80 201-285 101-181 (336)
36 3gqn_A Preneck appendage prote 96.9 0.057 2E-06 60.5 20.1 183 182-384 103-355 (772)
37 1bhe_A PEHA, polygalacturonase 96.7 0.024 8.1E-07 57.7 14.7 141 260-403 153-304 (376)
38 1czf_A Polygalacturonase II; b 96.7 0.02 6.8E-07 58.5 14.1 93 201-298 127-221 (362)
39 2uvf_A Exopolygalacturonase; G 96.7 0.053 1.8E-06 58.9 17.6 78 199-285 330-408 (608)
40 1idk_A Pectin lyase A; signal, 96.6 0.18 6.2E-06 51.7 20.0 47 199-245 152-200 (359)
41 1ogo_X Dextranase; hydrolase, 96.6 0.075 2.6E-06 57.7 17.9 125 103-242 264-413 (574)
42 2nsp_A Pectinesterase A; micha 96.5 0.12 4E-06 52.7 18.1 35 206-242 137-171 (342)
43 1dbg_A Chondroitinase B; beta 96.5 0.019 6.3E-07 61.5 12.5 150 208-373 125-312 (506)
44 3zsc_A Pectate trisaccharide-l 96.5 0.19 6.6E-06 51.3 19.3 48 199-247 115-164 (340)
45 3uw0_A Pectinesterase; right-h 96.4 0.17 5.9E-06 52.0 18.8 40 202-242 158-198 (364)
46 1pxz_A Major pollen allergen J 96.2 0.037 1.3E-06 56.4 12.3 133 279-417 105-266 (346)
47 1pxz_A Major pollen allergen J 96.2 0.057 1.9E-06 55.1 13.4 48 197-245 147-196 (346)
48 1k5c_A Endopolygalacturonase; 96.0 0.16 5.5E-06 51.3 15.8 91 202-298 99-193 (335)
49 1qcx_A Pectin lyase B; beta-he 95.5 1.1 3.9E-05 45.8 19.7 47 199-245 152-200 (359)
50 1idk_A Pectin lyase A; signal, 94.9 0.13 4.4E-06 52.8 10.8 129 281-417 125-274 (359)
51 1x0c_A Isopullulanase; glycosi 94.9 0.15 5E-06 55.0 11.7 128 102-242 221-375 (549)
52 1qcx_A Pectin lyase B; beta-he 94.5 0.19 6.5E-06 51.5 10.9 129 281-417 125-274 (359)
53 1pcl_A Pectate lyase E; lyase 94.3 0.34 1.2E-05 49.6 12.0 132 281-417 97-274 (355)
54 2qy1_A Pectate lyase II; GAG l 94.0 0.32 1.1E-05 49.1 11.1 133 281-417 87-244 (330)
55 3zsc_A Pectate trisaccharide-l 93.6 0.5 1.7E-05 48.3 11.7 132 281-417 84-244 (340)
56 3vmv_A Pectate lyase; polysacc 92.8 2.1 7.1E-05 43.4 14.9 18 55-83 19-36 (326)
57 1air_A Pectate lyase C, PELC; 92.6 0.54 1.8E-05 48.1 10.3 131 281-417 104-255 (353)
58 1h80_A IOTA-carrageenase; hydr 92.5 1.4 4.8E-05 46.6 13.6 41 201-242 168-210 (464)
59 2qy1_A Pectate lyase II; GAG l 92.0 3.6 0.00012 41.4 15.4 48 199-246 112-176 (330)
60 3vmv_A Pectate lyase; polysacc 91.9 0.91 3.1E-05 46.0 10.9 131 281-417 96-244 (326)
61 1vbl_A Pectate lyase 47; PL 47 91.6 0.77 2.6E-05 48.1 10.2 132 281-417 149-328 (416)
62 1pcl_A Pectate lyase E; lyase 91.1 1.4 4.8E-05 45.1 11.4 48 199-246 132-197 (355)
63 3grh_A YBHC, acyl-COA thioeste 90.8 18 0.00062 38.0 19.9 46 76-133 90-136 (422)
64 2o04_A Pectate lyase, PL; hexa 89.8 0.95 3.2E-05 47.1 8.9 133 280-417 143-323 (399)
65 1pe9_A Pectate lyase A; parall 89.6 1.2 4.1E-05 45.8 9.4 133 281-417 104-285 (361)
66 2x3h_A K5 lyase, K5A lyase; ba 87.7 10 0.00036 38.9 14.4 62 55-137 61-123 (542)
67 1air_A Pectate lyase C, PELC; 87.2 6.9 0.00024 39.9 13.1 48 199-246 129-190 (353)
68 1pe9_A Pectate lyase A; parall 85.0 14 0.00047 37.9 14.1 47 200-246 143-208 (361)
69 1vbl_A Pectate lyase 47; PL 47 81.5 17 0.00057 38.0 13.2 19 201-219 190-208 (416)
70 3ju4_A Endo-N-acetylneuraminid 73.8 1.3 4.4E-05 47.2 2.1 38 64-116 4-41 (670)
71 2o04_A Pectate lyase, PL; hexa 70.5 48 0.0016 34.3 13.0 48 199-246 182-247 (399)
72 2x6w_A Tail spike protein; vir 58.4 58 0.002 35.7 11.2 43 182-232 207-254 (600)
73 3t9g_A Pectate lyase; PL3, par 27.4 4.1E+02 0.014 25.3 13.1 50 188-240 55-104 (196)
74 3riq_A Tailspike protein; righ 23.6 1.7E+02 0.0058 31.2 7.4 88 266-363 308-407 (543)
75 3n6z_A Putative immunoglobulin 20.7 1.5E+02 0.0051 30.3 6.3 86 255-347 97-208 (363)
No 1
>3eqn_A Glucan 1,3-beta-glucosidase; tandem beta-helix domains, glycosidase, hydrolase; HET: NAG BMA; 1.70A {Phanerochaete chrysosporium} PDB: 3eqo_A*
Probab=99.97 E-value=2.1e-30 Score=284.36 Aligned_cols=236 Identities=22% Similarity=0.181 Sum_probs=180.7
Q ss_pred ccccccccchhhHhhhhhcccCCCCCCCCCCCCCeEE-eeccccCCCCCCchhHHHHHHHHHhhhcc---CCCccccccc
Q 011125 23 TSISEENMPARLLAKLQVAQNAPCPSASSIKNNGRVF-YPIGYGADPTGANESSDAILQALNDAFNV---QSGLELLPGV 98 (493)
Q Consensus 23 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~rv~-nV~dYGAdptG~tDsT~Aiq~AI~~A~~~---~~~~~l~pgi 98 (493)
++.......+|||++|+|+|.+||.+.++ .|+|| ||+||||++||++|||+|||+||++|.++ |..++.
T Consensus 16 ~~~~~~~~~~~Wl~~i~h~G~~p~~~~~~---~y~v~~nV~dfGA~GDG~tDDT~Aiq~Ai~~a~~~Gggc~~st~---- 88 (758)
T 3eqn_A 16 THGSAAPGDPFWLQNIQHQGIAAFNGNPG---GYPVFRNVKNYGAKGDGNTDDTAAIQAAINAGGRCGQGCDSTTT---- 88 (758)
T ss_dssp CSCCCCTTSCCHHHHSCCCCCCTTSSCTT---TCCSEEEGGGGTCCCEEEEECHHHHHHHHHTTSCSCTTCCCCSS----
T ss_pred CCCccccCCCcchhccccCCcCCCCCCCC---CCeEEEEHHHcCcCCCCCchhHHHHHHHHHHhhhcccccccccc----
Confidence 44444456679999999999999976322 78888 99999999999999999999999987443 222322
Q ss_pred ccCCceEEEecCceEEeeccEEeCCCCcceeEe---CCeEEecCCCCCCcceEEeccCCCcccccccceeeccceeeccc
Q 011125 99 KDLGGVIIDFQGGNYKISKPIRFPPGVGNVVVQ---GGTLRASDTFPSDRHLIELWAPNSQKLKRTDAIKIDRNYVFNDV 175 (493)
Q Consensus 99 ~~~Gga~V~lPgGTYlIs~pI~lp~g~Gni~i~---~GTLkAs~~Fpgd~~lI~~~~~n~~~i~G~~~GtlDg~w~~~c~ 175 (493)
.+++||||+|+|+|++||++|++. .+... .++|||.+.|.+.. +|+...-. +. | ..||.
T Consensus 89 ---~~~~V~~P~GtYlvs~tI~l~~~t-~L~G~~~~~pvIka~~~F~G~~-li~~d~y~-----~~--G--~~w~~---- 150 (758)
T 3eqn_A 89 ---QPALVYFPPGTYKVSSPLVVLYQT-QLIGDAKNLPTLLAAPNFSGIA-LIDADPYL-----AG--G--AQYYV---- 150 (758)
T ss_dssp ---SCEEEEECSSEEEESSCEECCTTE-EEEECSSSCCEEEECTTCCSSC-SEESSCBC-----GG--G--CBSSC----
T ss_pred ---cceEEEECCceEEEcccEEccCCe-EEEecCCCCCeEecCCCCCCcc-eeeccccC-----CC--C--ccccc----
Confidence 348999999999999999999874 44322 25899999998754 67542111 00 0 11331
Q ss_pred ccCcCCccccceeeeeeEeecce---eecceEEeeeecEEEeeeEEeeeccCcEEEeeeeeEEEeeeeeeeccccCCCCC
Q 011125 176 KDQTARTYYEDITFRDVLFDSGF---RGGGIFVIDSARIRINNCFFLHFTTQGILVQRGHETFISSCFLGQRSTVGGDPG 252 (493)
Q Consensus 176 ~s~~~~~~~~~IT~~~lv~D~n~---~ggGI~v~nSq~v~I~NC~~~~fnTDGI~V~~s~~v~Isns~ig~~~t~ggd~~ 252 (493)
+.+.+++.+++|++|... ...+|+|..+|.++|.||+|. |++..|
T Consensus 151 -----~~~~F~r~irNlviD~t~~~~~~~gIhw~vaQatsL~Nv~i~------------------------m~~~sg--- 198 (758)
T 3eqn_A 151 -----NQNNFFRSVRNFVIDLRQVSGSATGIHWQVSQATSLINIVFQ------------------------MSTAAG--- 198 (758)
T ss_dssp -----GGGCCCEEEEEEEEECTTCSSCEEEEECCCCSSEEEEEEEEE------------------------CCCSTT---
T ss_pred -----cccceeeeecceEEeccccCCCceEEEEEecCceEEEEEEEE------------------------ecCCCC---
Confidence 467899999999999864 368999999999999999887 664322
Q ss_pred ccccceEEEEEc-cCCceeeeEEEeecceeEEEecceeEEEeeEEecccccccceeEEEec-cc--cccceeccc
Q 011125 253 EKGFSGTAIDLA-SNDNAITDVTIFSAAIGVLLRGQANIVTRVHCYNKATAFGGIGILVKL-AD--AALTRIDNC 323 (493)
Q Consensus 253 e~~f~gtGI~l~-gNd~~ItD~~i~sa~~GI~v~gq~~ii~gvh~yN~~t~~GG~Gi~~~~-~~--~~~~rI~nc 323 (493)
..+.||.|+ |....|+|++|.++++||++++||+++++++|+|++|+ |+..- -+ +..-.|.||
T Consensus 199 ---~~~~GI~~e~GSgg~i~Dl~f~GG~~G~~~gnQQfT~rnltF~~~~ta-----I~~~w~wgwt~~~~~i~nc 265 (758)
T 3eqn_A 199 ---NQHQGIFMENGSGGFLGDLVFNGGNIGATFGNQQFTVRNLTFNNANTA-----INAIWNWGWTFQRITINNC 265 (758)
T ss_dssp ---CCEEEEEECSCCCCEEEEEEEESCSEEEEEECSCCEEEEEEEESCSEE-----EEEEEBSCEEEEEEEEESC
T ss_pred ---CcceeEEecCCCceEEEeeEEeCCceEEEcCCcceEEeccEEeChHHH-----HhhhcCceEEEEEeEEECC
Confidence 248999999 67889999999999999999999999999999999874 34431 12 445677888
No 2
>2pyg_A Poly(beta-D-mannuronate) C5 epimerase 4; beta-helix, isomerase; 2.10A {Azotobacter vinelandii} PDB: 2pyh_A*
Probab=99.92 E-value=1.6e-23 Score=210.08 Aligned_cols=279 Identities=15% Similarity=0.215 Sum_probs=189.7
Q ss_pred EEeeccccCCCCCCchhHHHHHHHHHhhhccCCCcccccccccCCceEEEecCceEEeec-------cEEeCCCCcceeE
Q 011125 58 VFYPIGYGADPTGANESSDAILQALNDAFNVQSGLELLPGVKDLGGVIIDFQGGNYKISK-------PIRFPPGVGNVVV 130 (493)
Q Consensus 58 v~nV~dYGAdptG~tDsT~Aiq~AI~~A~~~~~~~~l~pgi~~~Gga~V~lPgGTYlIs~-------pI~lp~g~Gni~i 130 (493)
+|||++|||+|||++|+|+|||+||++|++ .|+.+|+||+|+|+++. ||.+++.. .+ .
T Consensus 2 ~~~v~~~ga~~dg~~ddt~aiq~Ai~~a~~-------------~gg~~v~~p~G~y~~~~~~~~~~g~l~~~~~v-~l-~ 66 (377)
T 2pyg_A 2 DYNVKDFGALGDGVSDDRASIQAAIDAAYA-------------AGGGTVYLPAGEYRVSAAGEPGDGCLMLKDGV-YL-A 66 (377)
T ss_dssp CEEGGGGTCCCEEEEECHHHHHHHHHHHHH-------------TTSEEEEECSEEEEECCCSSGGGCSEECCTTE-EE-E
T ss_pred EeeeeecCCCCCCCcchHHHHHHHHHHHHh-------------cCCCEEEECCeEEEEcccccCCcccEEecCCe-EE-E
Confidence 689999999999999999999999999873 24689999999999973 89988753 23 3
Q ss_pred eCC----eEEecCCCCCCc-ceEE--------eccCCCccccccc---ceeeccceeecccccCcCCccccceeeeeeEe
Q 011125 131 QGG----TLRASDTFPSDR-HLIE--------LWAPNSQKLKRTD---AIKIDRNYVFNDVKDQTARTYYEDITFRDVLF 194 (493)
Q Consensus 131 ~~G----TLkAs~~Fpgd~-~lI~--------~~~~n~~~i~G~~---~GtlDg~w~~~c~~s~~~~~~~~~IT~~~lv~ 194 (493)
.+| +|++++...... .++. +.....++++|.. .|++||||...|... ...|..++++++.+
T Consensus 67 g~g~~~t~l~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~I~G~~~~~~G~idGw~~~~~~~~---~~~~~nv~I~~~~i 143 (377)
T 2pyg_A 67 GAGMGETVIKLIDGSDQKITGMVRSAYGEETSNFGMRDLTLDGNRDNTSGKVDGWFNGYIPGG---DGADRDVTIERVEV 143 (377)
T ss_dssp ESSBTTEEEEECTTCBSCEEEEEECCTTSCCEEEEEEEEEEECCGGGCBSCEEEEEECSCTTS---SCCEEEEEEEEEEE
T ss_pred EcCCCCcEEEecCCCccCccceEeccCCCcceEEEEEEEEEECCCccCCccccceecccCccc---cccccceEEEeEEE
Confidence 332 456554222100 0111 1112234566643 278999776444322 34688888877655
Q ss_pred ecceeecceEEeeeec-EEEeeeEEeeeccCcEEEeeeeeEEEeeeeeeeccccCCCCCccccceEEEEEc--cCCceee
Q 011125 195 DSGFRGGGIFVIDSAR-IRINNCFFLHFTTQGILVQRGHETFISSCFLGQRSTVGGDPGEKGFSGTAIDLA--SNDNAIT 271 (493)
Q Consensus 195 D~n~~ggGI~v~nSq~-v~I~NC~~~~fnTDGI~V~~s~~v~Isns~ig~~~t~ggd~~e~~f~gtGI~l~--gNd~~It 271 (493)
- +..+.|+++..+.. +.+.||.+.+.+.|||.++.++...|+++++-... .-||.+. +.+..|.
T Consensus 144 ~-n~~~~gi~~~~~~~~~~i~n~~~~~~~~dGI~~~~s~~~~i~~N~~~~~~------------~~GI~~~~~s~~v~I~ 210 (377)
T 2pyg_A 144 R-EMSGYGFDPHEQTINLTIRDSVAHDNGLDGFVADYLVDSVFENNVAYAND------------RHGFNVVTSTHDFVMT 210 (377)
T ss_dssp E-CCSSCSEEECSSEEEEEEESCEEESCSSCSEEEESEEEEEEESCEEESCS------------SCSEEEETTCEEEEEE
T ss_pred E-ecccceEEeecccCCeEEEeEEeecCCCCceeEeccCCcEEECcEEEccc------------cCcEEEEeccCCeEEE
Confidence 3 33457888887654 88999999888999999999999999999653221 2236644 3466888
Q ss_pred eEEEeecceeEEE--------ecc-eeEEEeeEEecccccccceeEEEeccc---cccceecccccccceeeeeCCeeEE
Q 011125 272 DVTIFSAAIGVLL--------RGQ-ANIVTRVHCYNKATAFGGIGILVKLAD---AALTRIDNCYLDYTGIVLEDPVQVH 339 (493)
Q Consensus 272 D~~i~sa~~GI~v--------~gq-~~ii~gvh~yN~~t~~GG~Gi~~~~~~---~~~~rI~ncyldy~~iv~~d~~~~~ 339 (493)
|..+.....|+.+ ... ...|+++++++. .+.|+.++... +..++|.+| .+.+|+++...++.
T Consensus 211 nN~i~~~~~g~~~~~~g~~~~~~s~nv~i~~N~~~~n----~~~Gi~~~~~~~v~i~~N~i~~~--~~~GI~i~g~~~~~ 284 (377)
T 2pyg_A 211 NNVAYGNGSSGLVVQRGLEDLALPSNILIDGGAYYDN----AREGVLLKMTSDITLQNADIHGN--GSSGVRVYGAQDVQ 284 (377)
T ss_dssp SCEEESCSSCSEEEECCSSCCCCCEEEEEESCEEESC----SSCSEEEEEEEEEEEESCEEESC--SSCSEEEEEEEEEE
T ss_pred CCEEECccCceEEEeccccCCCCCccEEEECCEEEcC----ccCceEeccccCeEEECCEEECC--CCceEEEecCCCcE
Confidence 8888876666666 222 447888888865 35577766432 455555555 46799999999999
Q ss_pred EEceeeeecc------eeEEEeecce---------eeeeEEEeeeccCC
Q 011125 340 VTNGFFLGDA------NIVLKSIKGR---------ISGLTIVENMFNGS 373 (493)
Q Consensus 340 It~~~flg~a------~v~l~~~~~~---------~~g~~I~~N~~~g~ 373 (493)
|.+|.|.+.. ++++..-.+. .+...|.+|.|.|.
T Consensus 285 i~~N~i~~n~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~i~~N~i~g~ 333 (377)
T 2pyg_A 285 ILDNQIHDNAQAAAVPEVLLQSFDDTAGASGTYYTTLNTRIEGNTISGS 333 (377)
T ss_dssp EESCEEESCCSSSSCCSEEEECEEETTSSSCEEECCBCCEEESCEEECC
T ss_pred EECcEEECCcccccccceEEEEecCCCccceeeeeccCeEEECCEEECc
Confidence 9999998753 3444331111 25778888888884
No 3
>3jur_A EXO-poly-alpha-D-galacturonosidase; beta-helix, cell WALL biogenesis/degradation, glycosidase; 2.05A {Thermotoga maritima}
Probab=99.90 E-value=1e-22 Score=213.69 Aligned_cols=228 Identities=16% Similarity=0.186 Sum_probs=150.7
Q ss_pred CCeEEeeccccCCCCCCchhHHHHHHHHHhhhccCCCcccccccccCCceEEEecCceEEeeccEEeCCCCcceeEeCCe
Q 011125 55 NGRVFYPIGYGADPTGANESSDAILQALNDAFNVQSGLELLPGVKDLGGVIIDFQGGNYKISKPIRFPPGVGNVVVQGGT 134 (493)
Q Consensus 55 ~~rv~nV~dYGAdptG~tDsT~Aiq~AI~~A~~~~~~~~l~pgi~~~Gga~V~lPgGTYlIs~pI~lp~g~Gni~i~~GT 134 (493)
..++|||++|||++||++|+|+|||+||++ |.. .||++|++|+|+|++ +||.|+++. .+ ..+|+
T Consensus 24 ~~~~~~v~~~GA~gdg~tddt~Aiq~Ai~~-c~~------------~ggg~v~vP~G~yl~-~~l~l~s~v-~l-~l~gt 87 (448)
T 3jur_A 24 PDREVNLLDFGARGDGRTDCSESFKRAIEE-LSK------------QGGGRLIVPEGVFLT-GPIHLKSNI-EL-HVKGT 87 (448)
T ss_dssp CSCEEEGGGGTCCCEEEEECHHHHHHHHHH-HHH------------HTCEEEEECSSEEEE-SCEECCTTE-EE-EESSE
T ss_pred CCcEEEEEecccCCCCCeecHHHHHHHHHh-hhh------------cCCeEEEECCCcEEE-eeeEeCCCc-EE-EEEEE
Confidence 356999999999999999999999999975 422 256899999999986 799998753 33 56699
Q ss_pred EEecCC---C-CC------------CcceEEeccCCCcccccccceeecc------ceeecccccC------cC------
Q 011125 135 LRASDT---F-PS------------DRHLIELWAPNSQKLKRTDAIKIDR------NYVFNDVKDQ------TA------ 180 (493)
Q Consensus 135 LkAs~~---F-pg------------d~~lI~~~~~n~~~i~G~~~GtlDg------~w~~~c~~s~------~~------ 180 (493)
|+|+++ | |. ...||.+...+...+.|+ |+||| ||...+.+.. .+
T Consensus 88 L~~s~d~~~y~p~~~~~~~G~~~~~~~~lI~~~~~~ni~ItG~--GtIDG~G~~~~ww~~~~~~~~~~~~~~~~~~~~~~ 165 (448)
T 3jur_A 88 IKFIPDPERYLPVVLTRFEGIELYNYSPLVYALDCENVAITGS--GVLDGSADNEHWWPWKGKKDFGWKEGLPNQQEDVK 165 (448)
T ss_dssp EEECCCGGGGCSCEEEEETTEEEEESCCSEEEESCEEEEEESS--CEEECCCBTTBBGGGGCCGGGTCCTTSCCSHHHHH
T ss_pred EEecCCHHHhCcccccccccccccCccceEEEeCcEeeEEEEe--EEEECCCCchhhhhhcccccccccccccccccchh
Confidence 999863 4 31 123788877777788887 89998 4432221100 00
Q ss_pred -----------------Cccc-cceeeeeeEeecceeecceEEeeeec--EEEeeeEEeee----------ccCcEEEee
Q 011125 181 -----------------RTYY-EDITFRDVLFDSGFRGGGIFVIDSAR--IRINNCFFLHF----------TTQGILVQR 230 (493)
Q Consensus 181 -----------------~~~~-~~IT~~~lv~D~n~~ggGI~v~nSq~--v~I~NC~~~~f----------nTDGI~V~~ 230 (493)
+..+ ....+..|....+....|++++||+. +++.+|....+ |||||++.+
T Consensus 166 ~l~~~~~~~~p~~~~~~~~~~~~RP~~i~~~~~~nv~i~giti~nsp~~~i~~~~~~nv~i~~v~I~~~~~NtDGidi~~ 245 (448)
T 3jur_A 166 KLKEMAERGTPVEERVFGKGHYLRPSFVQFYRCRNVLVEGVKIINSPMWCIHPVLSENVIIRNIEISSTGPNNDGIDPES 245 (448)
T ss_dssp HHHHHHHHTCCGGGCBCSTTCCCCCCSEEEESCEEEEEESCEEESCSSCSEEEESCEEEEEESCEEEECSTTCCSBCCBS
T ss_pred hhhhhhcccCcchhhhccccccCCceEEEEEcccceEEEeeEEEeCCCceEeeeccCCEEEEeEEEeeccCCCccccccC
Confidence 0011 11234455555667888888888776 55555544433 999999999
Q ss_pred eeeEEEeeeeeeeccccCCCCCccccceEEEEEc-----------cCCceeeeEEE--eecceeEEEecc-eeEEEeeEE
Q 011125 231 GHETFISSCFLGQRSTVGGDPGEKGFSGTAIDLA-----------SNDNAITDVTI--FSAAIGVLLRGQ-ANIVTRVHC 296 (493)
Q Consensus 231 s~~v~Isns~ig~~~t~ggd~~e~~f~gtGI~l~-----------gNd~~ItD~~i--~sa~~GI~v~gq-~~ii~gvh~ 296 (493)
|+.+.|++|+|.. ||. +..|+-. ..+=.|.++.+ ..+..||.++.+ ..-++++++
T Consensus 246 s~nV~I~n~~i~~-----gDD------cIaiksg~~~dg~~~~~ps~nI~I~n~~~~~~~gh~gisiGS~~~~~v~nV~v 314 (448)
T 3jur_A 246 CKYMLIEKCRFDT-----GDD------SVVIKSGRDADGRRIGVPSEYILVRDNLVISQASHGGLVIGSEMSGGVRNVVA 314 (448)
T ss_dssp CEEEEEESCEEEE-----SSE------EEEEBCCCHHHHHHHCCCEEEEEEESCEEECSSCSEEEEECSSCTTCEEEEEE
T ss_pred CcCEEEEeeEEEe-----CCC------cEEeccCccccccccCCCceeEEEEEeEEecCCCcceEEECCcccCcEEEEEE
Confidence 9999999999962 222 2222221 11226677877 345568888644 224666666
Q ss_pred ecccccccceeEEEe
Q 011125 297 YNKATAFGGIGILVK 311 (493)
Q Consensus 297 yN~~t~~GG~Gi~~~ 311 (493)
.|+.-.-.-.|+.+|
T Consensus 315 ~n~~~~~t~~GirIK 329 (448)
T 3jur_A 315 RNNVYMNVERALRLK 329 (448)
T ss_dssp ESCEEESCSEEEEEE
T ss_pred EEEEEecccceEEEE
Confidence 666543223566666
No 4
>3gq8_A Preneck appendage protein; beta helix, viral protein; HET: NHE; 2.00A {Bacillus phage PHI29} PDB: 3gq7_A* 3gq9_A* 3gqa_A
Probab=99.85 E-value=8.7e-20 Score=197.42 Aligned_cols=320 Identities=15% Similarity=0.146 Sum_probs=199.3
Q ss_pred CCeEEeeccccCCCCCCchhHHHHHHHHHhhhccCCCcccccccccCCceEEEecCceEEeeccEEeCCCCcceeEe---
Q 011125 55 NGRVFYPIGYGADPTGANESSDAILQALNDAFNVQSGLELLPGVKDLGGVIIDFQGGNYKISKPIRFPPGVGNVVVQ--- 131 (493)
Q Consensus 55 ~~rv~nV~dYGAdptG~tDsT~Aiq~AI~~A~~~~~~~~l~pgi~~~Gga~V~lPgGTYlIs~pI~lp~g~Gni~i~--- 131 (493)
..+++||+||||+|||++|+|+|||+||++ | ++|+||+|+|++++||.|+++. .+...
T Consensus 19 ~~~~~nV~dfGA~gDG~tDdT~Aiq~Ai~~-----------------G-g~V~iP~GtYlis~~l~l~snv-~L~g~g~~ 79 (609)
T 3gq8_A 19 KQFGVSVKTYGAKGDGVTDDIRAFEKAIES-----------------G-FPVYVPYGTFMVSRGIKLPSNT-VLTGAGKR 79 (609)
T ss_dssp CSSSEEGGGGTCCCEEEEECHHHHHHHHHT-----------------S-SCEEECSEEEEESSCEEECSSE-EEEESCTT
T ss_pred CCcEEEeEecccCCCCCchhHHHHHHHHHc-----------------C-CEEEECCccEEEeCceEECCCc-EEEEeeCC
Confidence 346899999999999999999999999984 2 5899999999998999999753 34332
Q ss_pred CCeEEecCCCCCCcceEE----eccCCCcccccccceeecc---ceeecccccC---c---CCccccceeeeeeEeecce
Q 011125 132 GGTLRASDTFPSDRHLIE----LWAPNSQKLKRTDAIKIDR---NYVFNDVKDQ---T---ARTYYEDITFRDVLFDSGF 198 (493)
Q Consensus 132 ~GTLkAs~~Fpgd~~lI~----~~~~n~~~i~G~~~GtlDg---~w~~~c~~s~---~---~~~~~~~IT~~~lv~D~n~ 198 (493)
.++|++++.+|....++. +...+...+.| ++||| +|...+.... . .-..|+.++++++.+-..-
T Consensus 80 ~t~L~~~~~~p~~~~li~~lI~a~~~~NItItG---~TIDGNG~~~g~~~~~~g~~RP~lI~f~~c~NV~I~gVti~NSp 156 (609)
T 3gq8_A 80 NAVIRFMDSVGRGESLMYNENVTTGNENIFLSS---FTLDGNNKRLGQGISGIGGSRESNLSIRACHNVYIRDIEAVDCT 156 (609)
T ss_dssp TEEEEECTTCCSSCCSEEESCTTTCCEEEEEEE---EEEECCGGGGCSSCCCSSTTTTCSEEEESCEEEEEEEEEEESCS
T ss_pred CCEEEeCCCCCCCCceeeeeeeecccccEEEEe---eEEECCccccCcccccCCCCCccEEEEEeeceEEEEeeEEEeCC
Confidence 258999888776543332 22333455665 38888 2211111000 0 0135666666665553221
Q ss_pred eecceEEee-----------------eecEEEeeeEEeeeccCcEEEeeeeeEEEeeeeeeeccccCCCCCccccceEEE
Q 011125 199 RGGGIFVID-----------------SARIRINNCFFLHFTTQGILVQRGHETFISSCFLGQRSTVGGDPGEKGFSGTAI 261 (493)
Q Consensus 199 ~ggGI~v~n-----------------Sq~v~I~NC~~~~fnTDGI~V~~s~~v~Isns~ig~~~t~ggd~~e~~f~gtGI 261 (493)
..++.+.+ |+.+.|.||++....+|+|.+.+++.+.|+||++.... |.. .+-||
T Consensus 157 -~~gI~I~~~~~NDGid~DGi~fd~~S~NV~I~Nc~I~~tGDDcIaIksseNI~I~Nc~~~gp~--G~S------~~~GI 227 (609)
T 3gq8_A 157 -LHGIDITCGGLDYPYLGDGTTAPNPSENIWIENCEATGFGDDGITTHHSQYINILNCYSHDPR--LTA------NCNGF 227 (609)
T ss_dssp -SCSEEEECSSSSCCCCCTTCCCSSCCEEEEEESCEEESCSSCSEEECSCEEEEEESCEEECCS--SCS------SCCSE
T ss_pred -CCCeEEeCCCCCccccCCCccccccceeEEEEeeEEEecCCCEEEecCCeeEEEEeEEEECCC--CCC------CcccE
Confidence 12333322 78899999999889999999999999999999993111 100 13467
Q ss_pred EEccC--CceeeeEEEeecceeEEEecc--eeEEEeeEEeccccc-------ccceeEEEe-ccc---cccceeccc---
Q 011125 262 DLASN--DNAITDVTIFSAAIGVLLRGQ--ANIVTRVHCYNKATA-------FGGIGILVK-LAD---AALTRIDNC--- 323 (493)
Q Consensus 262 ~l~gN--d~~ItD~~i~sa~~GI~v~gq--~~ii~gvh~yN~~t~-------~GG~Gi~~~-~~~---~~~~rI~nc--- 323 (493)
++.+. +-+|.|+.|.....||++--+ .-.+++|+++|+-.. +-=+|-|.. .|. .+.-.|.||
T Consensus 228 sIGsgs~NVtV~Nc~i~nt~~GIrIKt~~~~~~v~NV~I~n~vs~~nvrsyn~r~iG~~~a~dp~s~~a~nV~l~n~~~~ 307 (609)
T 3gq8_A 228 EIDDGSRHVVLSNNRSKGCYGGIEIKAHGDAPAAYNISINGHMSVEDVRSYNFRHIGHHAATAPQSVSAKNIVASNLVSI 307 (609)
T ss_dssp EECTTCEEEEEESEEEESSSEEEEEEECTTSCCCEEEEEEEEEEESCSEEEEEEETTSCSTTSCCCSSCEEEEEEEEEEE
T ss_pred EccCCcccEEEEeeEEECCCCEEEEEecCCCCccccEEEECCEeecCceEecceEEccccCCCCCcceecceEeecceEE
Confidence 77732 448999999999999999632 223455555543211 011111210 000 222333333
Q ss_pred ccccc----------eeeeeCCeeEEEEceeeeeccee-----EEEeecceeeeeEEEeeeccCCCCCCcceEeecCc--
Q 011125 324 YLDYT----------GIVLEDPVQVHVTNGFFLGDANI-----VLKSIKGRISGLTIVENMFNGSPARNVPIIKLDGE-- 386 (493)
Q Consensus 324 yldy~----------~iv~~d~~~~~It~~~flg~a~v-----~l~~~~~~~~g~~I~~N~~~g~~~~gv~iv~~~g~-- 386 (493)
+--|+ ++++++-.+|.|.+..+.||.+- ++.-. ...+.+.+-+-++.|--.+..+|.-|-|.
T Consensus 308 ~p~~~~~~y~~~~~r~l~vs~~~~v~i~~~~~~~d~~y~~~~~~~~~q-~~~~~~~l~~~~i~gf~~a~~~i~~~gg~~~ 386 (609)
T 3gq8_A 308 RPNNKRGFQDNATPRVLAVSAYYGVVINGLTGYTDDPNLLTETVVSVQ-FRARNCSLNGVVLTGFSNSENGIYVIGGSRG 386 (609)
T ss_dssp SCCCTTCHHHHCCCEEEEEESCEEEEEEEEEEECSCTTSCCSEEEEEE-TTCEEEEEEEEEEESCTTCSEEEEECCCCCT
T ss_pred eecccCceeeCCCcceEEEEcCCCeEEcCceEccCCccccCCceEEEE-EecceeEEcceEEecccCCCCCeEEeCCCCc
Confidence 22222 89999999999999999997652 22222 45566677777777664445555544432
Q ss_pred --eeeeeeEEEeeecccceeeE
Q 011125 387 --FSNIDQVVIERNNVNGMSLK 406 (493)
Q Consensus 387 --f~~i~~v~vd~n~~~gm~~~ 406 (493)
-=.|.++.+..-...|+.+-
T Consensus 387 ~~~v~i~n~~i~~s~~~gi~~g 408 (609)
T 3gq8_A 387 GDAVNISNVTLNNSGRYGVSIG 408 (609)
T ss_dssp TCCEEEEEEEEESCCSEEEEEC
T ss_pred CCeEEEeccEEeecccccEEec
Confidence 23345666655555566654
No 5
>1rmg_A Rgase A, rhamnogalacturonase A; hydrolase, inverting, parallel beta-helix, glycosidase; HET: NAG BMA MAN GLC; 2.00A {Aspergillus aculeatus} SCOP: b.80.1.3
Probab=99.84 E-value=6.2e-19 Score=183.39 Aligned_cols=223 Identities=13% Similarity=0.110 Sum_probs=141.8
Q ss_pred CCeEEeeccccCCCCCCchhHHHHHHHHHhhhccCCCcccccccccCCceEEEecCceEEeeccEEeCCCCccee-EeCC
Q 011125 55 NGRVFYPIGYGADPTGANESSDAILQALNDAFNVQSGLELLPGVKDLGGVIIDFQGGNYKISKPIRFPPGVGNVV-VQGG 133 (493)
Q Consensus 55 ~~rv~nV~dYGAdptG~tDsT~Aiq~AI~~A~~~~~~~~l~pgi~~~Gga~V~lPgGTYlIs~pI~lp~g~Gni~-i~~G 133 (493)
..+++||++|||++||++|+|+|||+||+ ||+ ++++|+||+|+|++.+||.|+.. .++. ..+|
T Consensus 17 ~~~~~~V~~~GA~~dg~tddT~Aiq~Ai~-ac~--------------~g~~V~vP~G~Yli~~~l~l~g~-s~v~l~l~G 80 (422)
T 1rmg_A 17 ATKTCNILSYGAVADNSTDVGPAITSAWA-ACK--------------SGGLVYIPSGNYALNTWVTLTGG-SATAIQLDG 80 (422)
T ss_dssp HHCEEEGGGGTCCCSSSSBCHHHHHHHHH-HHT--------------BTCEEEECSSEEEECSCEEEESC-EEEEEEECS
T ss_pred CCcEEEeeeccccCCCCcccHHHHHHHHH-HCC--------------CCCEEEECCCeEEeCCceeecCC-CeEEEEEcC
Confidence 46789999999999999999999999999 563 24699999999999767999832 2343 5679
Q ss_pred eEEecCCCCCCcceEEeccCCC---cccccccceeecc----ceeecccccC-cCCccccceeeeeeEeecceeecceEE
Q 011125 134 TLRASDTFPSDRHLIELWAPNS---QKLKRTDAIKIDR----NYVFNDVKDQ-TARTYYEDITFRDVLFDSGFRGGGIFV 205 (493)
Q Consensus 134 TLkAs~~Fpgd~~lI~~~~~n~---~~i~G~~~GtlDg----~w~~~c~~s~-~~~~~~~~IT~~~lv~D~n~~ggGI~v 205 (493)
++.++.+-. ..|+.+..... ..+.|. |+||| ||...+.+.. -.-..|+.++++++.+... ..-++.+
T Consensus 81 ~~l~~~~~~--~~~~~~~~~~~~~~i~i~G~--G~IdG~G~~~w~~~~~rp~~i~~~~~~nv~I~~iti~ns-p~~~i~i 155 (422)
T 1rmg_A 81 IIYRTGTAS--GNMIAVTDTTDFELFSSTSK--GAVQGFGYVYHAEGTYGARILRLTDVTHFSVHDIILVDA-PAFHFTM 155 (422)
T ss_dssp EEEECCCCS--SEEEEEEEEEEEEEECSSSC--CEEECCTHHHHTTTCCCCEEEEEEEEEEEEEEEEEEECC-SSCSEEE
T ss_pred cEEcccCCC--CceEEEEecCceeEEeeccC--EEEECCcchhhcCCCCCceEEEEcccceEEEECeEEECC-CceEEEE
Confidence 888765422 35777644332 234554 89999 4531111000 0012344444444444321 1124555
Q ss_pred eeeecEEEeeeEEee---eccCcEEEeeeeeEEEeeeeeeeccccCCCCCccccceEEEEEccCCceeeeEEEeecceeE
Q 011125 206 IDSARIRINNCFFLH---FTTQGILVQRGHETFISSCFLGQRSTVGGDPGEKGFSGTAIDLASNDNAITDVTIFSAAIGV 282 (493)
Q Consensus 206 ~nSq~v~I~NC~~~~---fnTDGI~V~~s~~v~Isns~ig~~~t~ggd~~e~~f~gtGI~l~gNd~~ItD~~i~sa~~GI 282 (493)
..|+.+.|.||.+.. -++|||++.. +.+.|+||+|.. ||. +..|+-...+-.|.|+.+.++ +||
T Consensus 156 ~~~~nv~I~n~~I~~~d~~ntDGidi~~-~nV~I~n~~i~~-----gDD------~Iai~s~~~nI~I~n~~~~~~-~Gi 222 (422)
T 1rmg_A 156 DTCSDGEVYNMAIRGGNEGGLDGIDVWG-SNIWVHDVEVTN-----KDE------CVTVKSPANNILVESIYCNWS-GGC 222 (422)
T ss_dssp EEEEEEEEEEEEEECCSSTTCCSEEEEE-EEEEEEEEEEES-----SSE------EEEEEEEEEEEEEEEEEEESS-SEE
T ss_pred eCcCCEEEEeEEEECCCCCCCccEeecC-CeEEEEeeEEeC-----CCC------eEEeCCCCcCEEEEeEEEcCC-cce
Confidence 666677778887776 2799999999 999999999951 222 434443233458899986554 699
Q ss_pred EEe--cceeEEEeeEEecccccccceeEEEe
Q 011125 283 LLR--GQANIVTRVHCYNKATAFGGIGILVK 311 (493)
Q Consensus 283 ~v~--gq~~ii~gvh~yN~~t~~GG~Gi~~~ 311 (493)
.+. |....++++++.|+.-.--..|+.+|
T Consensus 223 sIGS~g~~~~v~nV~v~n~~~~~~~~Gi~Ik 253 (422)
T 1rmg_A 223 AMGSLGADTDVTDIVYRNVYTWSSNQMYMIK 253 (422)
T ss_dssp EEEEECTTEEEEEEEEEEEEEESSSCSEEEE
T ss_pred eecccCCCCcEEEEEEEeEEEeccceEEEEE
Confidence 984 32223555555555332223466766
No 6
>2uvf_A Exopolygalacturonase; GH28, pectin, cell WALL, hydrolase, periplasm, beta-helix, glycosidase, EXO-activity; HET: AD0; 2.1A {Yersinia enterocolitica} PDB: 2uve_A*
Probab=99.84 E-value=2.4e-19 Score=194.08 Aligned_cols=287 Identities=15% Similarity=0.176 Sum_probs=166.6
Q ss_pred CCeEEeeccccCCCCCCchhHHHHHHHHHhhhccCCCcccccccccCCceEEEecCceEEeeccEEeCCCCcceeEe-CC
Q 011125 55 NGRVFYPIGYGADPTGANESSDAILQALNDAFNVQSGLELLPGVKDLGGVIIDFQGGNYKISKPIRFPPGVGNVVVQ-GG 133 (493)
Q Consensus 55 ~~rv~nV~dYGAdptG~tDsT~Aiq~AI~~A~~~~~~~~l~pgi~~~Gga~V~lPgGTYlIs~pI~lp~g~Gni~i~-~G 133 (493)
..+++||++|||++||++|+|+|||+||+ ||+. |++|+||+|+|++ +||.|++.. .+.+. ++
T Consensus 153 ~~~~~~v~~~Ga~~dg~~ddt~aiq~Ai~-~c~~--------------g~~v~vP~G~y~~-g~i~lks~v-~L~l~~ga 215 (608)
T 2uvf_A 153 KPQIVNVRDFGAIDDGKTLNTKAIQQAID-SCKP--------------GCRVEIPAGTYKS-GALWLKSDM-TLNLQAGA 215 (608)
T ss_dssp CCCEEEGGGGTCCSSSSCCCHHHHHHHHH-TCCT--------------TEEEEECSEEEEE-CCEECCSSE-EEEECTTE
T ss_pred CCCEEecccccccCCCCccCHHHHHHHHH-hcCC--------------CCEEEECCCceEe-cceeccCce-EEEecCCc
Confidence 56789999999999999999999999997 5521 4699999999998 799998653 33232 67
Q ss_pred eEEecC---CCCCC------------cceEEecc--------CCCcccccccceeecc----ceeeccccc-C-------
Q 011125 134 TLRASD---TFPSD------------RHLIELWA--------PNSQKLKRTDAIKIDR----NYVFNDVKD-Q------- 178 (493)
Q Consensus 134 TLkAs~---~Fpgd------------~~lI~~~~--------~n~~~i~G~~~GtlDg----~w~~~c~~s-~------- 178 (493)
+|+++. +|+.. ..||.... .+...|.|+ |+||| +|...+... .
T Consensus 216 tL~~s~d~~~y~~~~~~~~~~~~~~~~~lI~~~~~~~~~~g~~~ni~I~G~--GtIDG~G~~~~~~~~~~~~~g~~~p~~ 293 (608)
T 2uvf_A 216 ILLGSENPDDYPAGYRLYPYSTIERPASLINAIDPNNSKPGTFRNIRITGS--GVIDGNGWLRAKTAEITDELGRSLPQY 293 (608)
T ss_dssp EEEECSCGGGSCEEECSSTTCCSCEECCSEEECCSSCCCTTSEEEEEEESS--CEEECCCBCEEEEEEEECTTSCEEEEE
T ss_pred EEEecCCHHHCcCcceeeeccccccccceEEeeccccccccceeeEEEEee--EEEcCcccccccccccccccccccccc
Confidence 999986 34421 02555443 244567776 89999 221100000 0
Q ss_pred ----c-------------------CCc-----ccc-ceeeeeeEeecceeecceEEeeeec--EEEeeeEEeee------
Q 011125 179 ----T-------------------ART-----YYE-DITFRDVLFDSGFRGGGIFVIDSAR--IRINNCFFLHF------ 221 (493)
Q Consensus 179 ----~-------------------~~~-----~~~-~IT~~~lv~D~n~~ggGI~v~nSq~--v~I~NC~~~~f------ 221 (493)
. .+. +|. .-.+..|....+....|++++||+. +.+.+|....+
T Consensus 294 ~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~rP~~i~~~~~~nv~I~giti~ns~~~~i~~~~~~nv~i~~v~i~ 373 (608)
T 2uvf_A 294 VASKNSKVHEDGILAKNQVEKAVSDGMDLKNAYGQRRSSLMTLRGVENVYLAGFTVRNPAFHGIMNLENHNVVANGLIHQ 373 (608)
T ss_dssp CCCCTTTHHHHBSHHHHHHHHHHHTTCCHHHHHHHSSCCSEEEESEEEEEEESCEEECCSSCSEEEESCEEEEEESCEEE
T ss_pred cccccccccccccccccccccccccccccccccccCCCeEEEEEeeeeEEEeCcEEecCCCCEEEEecCCCEEEeeEEEc
Confidence 0 000 011 1133444445567778888888765 55555553332
Q ss_pred -----ccCcEEEeeeeeEEEeeeeeeeccccCCCCCccccceEEEEEc----------cCCceeeeEEEeecceeEEEec
Q 011125 222 -----TTQGILVQRGHETFISSCFLGQRSTVGGDPGEKGFSGTAIDLA----------SNDNAITDVTIFSAAIGVLLRG 286 (493)
Q Consensus 222 -----nTDGI~V~~s~~v~Isns~ig~~~t~ggd~~e~~f~gtGI~l~----------gNd~~ItD~~i~sa~~GI~v~g 286 (493)
|||||++.+|+.+.|++|+|.. ||. ...|+-. ..+-.|.|+.+.++..++.++.
T Consensus 374 ~~~~~NtDGidi~~s~nV~I~n~~i~~-----gDD------~Iaiksg~~~~g~~~~~s~nI~I~n~~~~~ghg~~~iGS 442 (608)
T 2uvf_A 374 TYDANNGDGIEFGNSQNVMVFNNFFDT-----GDD------CINFAAGTGEKAQEQEPMKGAWLFNNYFRMGHGAIVTGS 442 (608)
T ss_dssp CTTCTTCCSEEEESCEEEEEESCEEEC-----SSC------SEEEECCCSGGGGGSCCEEEEEEESCEECSSSCSEEEES
T ss_pred CCCCCCCCeEEecCCceEEEEeeEEec-----CCc------eEEecCCcCccccccccccCEEEEeEEEeCCCCeEEEcc
Confidence 8999999999999999999962 232 2222211 1123678887777654444553
Q ss_pred c-eeEEEeeEEecccccccceeEEEeccccccceecccccccceeeeeCC--eeEEEEceeeeecceeEEE--eecceee
Q 011125 287 Q-ANIVTRVHCYNKATAFGGIGILVKLADAALTRIDNCYLDYTGIVLEDP--VQVHVTNGFFLGDANIVLK--SIKGRIS 361 (493)
Q Consensus 287 q-~~ii~gvh~yN~~t~~GG~Gi~~~~~~~~~~rI~ncyldy~~iv~~d~--~~~~It~~~flg~a~v~l~--~~~~~~~ 361 (493)
+ ..-++++++.|+.-.-...|+.+|-..-....++|- -|..|.+++- .-+.|.-+.+.+....-.. ...+.++
T Consensus 443 ~~~~~v~nI~v~n~~~~~t~~GirIKt~~g~gG~v~nI--~~~ni~m~~v~~~~i~I~~~y~~~~~~~~~~~~~~~~~~~ 520 (608)
T 2uvf_A 443 HTGAWIEDILAENNVMYLTDIGLRAKSTSTIGGGARNV--TFRNNAMRDLAKQVMVMTLDYADSNANIDYPPAKIPAQFY 520 (608)
T ss_dssp CCTTCEEEEEEESCEEESCSEEEEEEEETTTCCEEEEE--EEEEEEEEEESSEEEEEEEECCCCSCCCSSCCCSSCCEEE
T ss_pred cCCCCEEEEEEEeEEEECCCceEEEeeecCCCceEECc--EEEeeEEEccccccEEEEeccCCCCcccccCCcCCCCccc
Confidence 3 223555555555332233577777321122345554 4455555553 2344443333221100000 1235677
Q ss_pred eeEEEeeeccCC
Q 011125 362 GLTIVENMFNGS 373 (493)
Q Consensus 362 g~~I~~N~~~g~ 373 (493)
++.|-|-.|.+.
T Consensus 521 ~V~i~nI~~~n~ 532 (608)
T 2uvf_A 521 DFTLKNVTVDNS 532 (608)
T ss_dssp EEEEEEEEEEEE
T ss_pred cEEEEeEEEEee
Confidence 888877777654
No 7
>3gqn_A Preneck appendage protein; beta helix, beta barrel, ATP binding, viral protein; HET: ATP; 2.15A {Bacillus phage PHI29} PDB: 3suc_A*
Probab=99.83 E-value=4.4e-19 Score=195.32 Aligned_cols=319 Identities=15% Similarity=0.152 Sum_probs=195.9
Q ss_pred CCeEEeeccccCCCCCCchhHHHHHHHHHhhhccCCCcccccccccCCceEEEecCceEEeeccEEeCCCCcceeEe---
Q 011125 55 NGRVFYPIGYGADPTGANESSDAILQALNDAFNVQSGLELLPGVKDLGGVIIDFQGGNYKISKPIRFPPGVGNVVVQ--- 131 (493)
Q Consensus 55 ~~rv~nV~dYGAdptG~tDsT~Aiq~AI~~A~~~~~~~~l~pgi~~~Gga~V~lPgGTYlIs~pI~lp~g~Gni~i~--- 131 (493)
..+++||++|||+|||++|+|+|||+||++ | ++|+||+|+|++++||.|+++. .+...
T Consensus 19 ~~~~~nV~dfGA~gDG~tDdT~Aiq~Ai~a-----------------G-g~V~IPaGtYlisg~I~L~snv-~L~Geg~~ 79 (772)
T 3gqn_A 19 KQFGVSVKTYGAKGDGVTDDIRAFEKAIES-----------------G-FPVYVPYGTFMVSRGIKLPSNT-VLTGAGKR 79 (772)
T ss_dssp CSSSEESGGGTCCCEEEEECHHHHHHHHHT-----------------T-SCEEECSEEEEESSCEEECSSC-EEEEEEEE
T ss_pred CCcEEEeEecccCCCCChhHHHHHHHHHHc-----------------C-CEEEECCccEEEEeEEEECCCc-EEEEecCC
Confidence 346899999999999999999999999984 2 5899999999998999999753 34332
Q ss_pred CCeEEecCCCCCCcceE----EeccCCCcccccccceeecc--c-eee----cccccCc--CCccccceeeeeeEeecce
Q 011125 132 GGTLRASDTFPSDRHLI----ELWAPNSQKLKRTDAIKIDR--N-YVF----NDVKDQT--ARTYYEDITFRDVLFDSGF 198 (493)
Q Consensus 132 ~GTLkAs~~Fpgd~~lI----~~~~~n~~~i~G~~~GtlDg--~-w~~----~c~~s~~--~~~~~~~IT~~~lv~D~n~ 198 (493)
.++|++++.+|....++ .+...+...+.| ++||| . |.. .|..... .-..|..++++++.+-..-
T Consensus 80 ~t~Lk~~~d~p~~~~li~~lI~a~gveNItItG---~TIDGNG~~~g~~~~~~g~~RP~lI~f~~ckNV~I~gVti~NSp 156 (772)
T 3gqn_A 80 NAVIRFMDSVGRGESLMYNENVTTGNENIFLSS---FTLDGNNKRLGQGISGIGGSRESNLSIRACHNVYIRDIEAVDCT 156 (772)
T ss_dssp EEEEEECTTCCSSCCSEEESCTTTCCEEEEEEE---EEEECCGGGGCSSCCCSSTTTTCSEEEESCEEEEEEEEEEESCS
T ss_pred CCEEEeCCCCCCCCceeeeeeeccCceeEEEEe---eEEeCCccccCcccccCCCCCccEEEEEeeceEEEEeEEEEeCC
Confidence 25899988877655333 223334455665 38888 2 211 1110000 0135666666665553221
Q ss_pred eecceEEee-----------------eecEEEeeeEEeeeccCcEEEeeeeeEEEeeeeeeeccccCCCCCccccceEEE
Q 011125 199 RGGGIFVID-----------------SARIRINNCFFLHFTTQGILVQRGHETFISSCFLGQRSTVGGDPGEKGFSGTAI 261 (493)
Q Consensus 199 ~ggGI~v~n-----------------Sq~v~I~NC~~~~fnTDGI~V~~s~~v~Isns~ig~~~t~ggd~~e~~f~gtGI 261 (493)
..++++.+ |+.+.|.||++....+|+|.+.+++.+.|+||++.... |.. .+-||
T Consensus 157 -~~gI~I~np~~NDGid~DGi~fdi~S~NV~I~Nc~I~ntGDDcIAIksSeNI~I~Nc~c~gph--G~S------~~~GI 227 (772)
T 3gqn_A 157 -LHGIDITCGGLDYPYLGDGTTAPNPSENIWIENCEATGFGDDGITTHHSQYINILNCYSHDPR--LTA------NCNGF 227 (772)
T ss_dssp -SCSEEEECSSSSCCCCCTTCCCSSCCEEEEEESCEEESCSSCSEEECSCEEEEEESCEEECCS--SSS------SCCSE
T ss_pred -CCCEEEeCCCcCCcCCCcCcccccccceEEEEeeEEEecCcCeEEecCCceEEEEeEEEECCC--CCC------CcccE
Confidence 12333321 78899999999888999999999999999999994111 111 13467
Q ss_pred EEccC--CceeeeEEEeecceeEEEecc--eeEEEeeEEeccccc-------ccceeEEEe-cc---ccccceeccc---
Q 011125 262 DLASN--DNAITDVTIFSAAIGVLLRGQ--ANIVTRVHCYNKATA-------FGGIGILVK-LA---DAALTRIDNC--- 323 (493)
Q Consensus 262 ~l~gN--d~~ItD~~i~sa~~GI~v~gq--~~ii~gvh~yN~~t~-------~GG~Gi~~~-~~---~~~~~rI~nc--- 323 (493)
++.+. +-+|.|+.|.....||++-.+ ...++++++.+.-.- +.=+|-+.. .| -...-.|.||
T Consensus 228 sIGsgs~NVtV~Nc~~~nT~nGIRIKt~~~gg~v~NV~I~gnis~~dvrsynir~iG~h~a~dp~s~~a~nV~l~n~~~~ 307 (772)
T 3gqn_A 228 EIDDGSRHVVLSNNRSKGCYGGIEIKAHGDAPAAYNISINGHMSVEDVRSYNFRHIGHHAATAPQSVSAKNIVASNLVSI 307 (772)
T ss_dssp EECTTCEEEEEEEEEEESSSEEEEECCCTTSCCCEEEEEEEEEEESCSEEEEECCTTSCSSSSCCCSSCEEEEEEEEEEE
T ss_pred EecCCcccEEEEceEEECCCcEEEEEEeCCCCccccEEEECCEEeccCeEecceEEccccCCCCCCccCccEEeecceEE
Confidence 77743 448999999999999999622 223444444432110 011111110 00 0222333333
Q ss_pred ----------ccccceeeeeCCeeEEEEceeeeeccee-----EEEeecceeeeeEEEeeeccCCCCCCcceEeecCce-
Q 011125 324 ----------YLDYTGIVLEDPVQVHVTNGFFLGDANI-----VLKSIKGRISGLTIVENMFNGSPARNVPIIKLDGEF- 387 (493)
Q Consensus 324 ----------yldy~~iv~~d~~~~~It~~~flg~a~v-----~l~~~~~~~~g~~I~~N~~~g~~~~gv~iv~~~g~f- 387 (493)
=.+..++++++-.+|.|.+..+.||.+- ++.-. ...+.+++-+-++.|--.+..+|.-|-|.=
T Consensus 308 ~P~~~~~ly~~~~praL~vsay~~v~i~~~~~igd~~y~~~~~~i~~q-~~~~~~~ln~i~i~gf~~a~~~i~v~gg~~~ 386 (772)
T 3gqn_A 308 RPNNKRGFQDNATPRVLAVSAYYGVVINGLTGYTDDPNLLTETVVSVQ-FRARNCSLNGVVLTGFSNSENGIYVIGGSRG 386 (772)
T ss_dssp SCCCSSCHHHHCCCEEEEEESCEEEEEEEEEEECSCTTSCCSEEEEEE-TTCEEEEEEEEEEESCTTCSEEEEECCSTTC
T ss_pred cccccCceeeCCCcceEEEEcCCCcEecCceeccCcccccCCceEEEE-EecceeEEcceEEecccCCCCCeEEeCCCCC
Confidence 1223389999999999999999997652 22222 455666666666666644454554444321
Q ss_pred ---eeeeeEEEeeecccceee
Q 011125 388 ---SNIDQVVIERNNVNGMSL 405 (493)
Q Consensus 388 ---~~i~~v~vd~n~~~gm~~ 405 (493)
=.|.++.+..-...|+.+
T Consensus 387 ~~~v~i~n~~i~~s~~~gi~~ 407 (772)
T 3gqn_A 387 GDAVNISNVTLNNSGRYGVSI 407 (772)
T ss_dssp CEEEEEEEEEEESCCSEEEEE
T ss_pred CCeEEEeccEEeecccccEEe
Confidence 233555554444446554
No 8
>1h80_A IOTA-carrageenase; hydrolase, IOTA-carrageenan double helix degradation; 1.6A {Alteromonas SP} SCOP: b.80.1.8 PDB: 1ktw_A* 3lmw_A
Probab=99.78 E-value=1.6e-17 Score=175.34 Aligned_cols=158 Identities=13% Similarity=0.134 Sum_probs=104.5
Q ss_pred CCeEEe-eccccCCCCCCchhHHHHHHHHHhhhccCCCcccccccccCCceEEEecCceEEeeccEEeCCCCcceeEe-C
Q 011125 55 NGRVFY-PIGYGADPTGANESSDAILQALNDAFNVQSGLELLPGVKDLGGVIIDFQGGNYKISKPIRFPPGVGNVVVQ-G 132 (493)
Q Consensus 55 ~~rv~n-V~dYGAdptG~tDsT~Aiq~AI~~A~~~~~~~~l~pgi~~~Gga~V~lPgGTYlIs~pI~lp~g~Gni~i~-~ 132 (493)
..++|+ |++|||+|||++|+|+|||+||+++++.+ |+++|+||+|+|++ +||.|++.. .+.+. +
T Consensus 18 ~~~~~~~V~dfGA~gDG~tDdT~Aiq~Aidac~~~~------------ggg~V~vP~GtYl~-g~I~lks~v-~L~l~~G 83 (464)
T 1h80_A 18 QDVNYDLVDDFGANGNDTSDDSNALQRAINAISRKP------------NGGTLLIPNGTYHF-LGIQMKSNV-HIRVESD 83 (464)
T ss_dssp CSEEEEHHHHHCCCTTSSSBCHHHHHHHHHHHHTST------------TCEEEEECSSEEEE-CSEECCTTE-EEEECTT
T ss_pred CcceeeehhccCcCCCCCchhHHHHHHHHHHHhhcc------------CCcEEEECCCeEEE-eeEeccCce-EEEEcCC
Confidence 456888 99999999999999999999997543211 46799999999998 799998753 34344 4
Q ss_pred CeEEecCC--CCCCcceEEe---ccCCCcccccccce---eeccceeecccccCcCCccccceeeeeeEeecceeecceE
Q 011125 133 GTLRASDT--FPSDRHLIEL---WAPNSQKLKRTDAI---KIDRNYVFNDVKDQTARTYYEDITFRDVLFDSGFRGGGIF 204 (493)
Q Consensus 133 GTLkAs~~--Fpgd~~lI~~---~~~n~~~i~G~~~G---tlDg~w~~~c~~s~~~~~~~~~IT~~~lv~D~n~~ggGI~ 204 (493)
++|+++.+ +. +..++.+ ...+.+.+.|. | ++||... .....++..|....+....+++
T Consensus 84 atL~~s~~td~~-~y~~~~~~~~~~~~nItI~G~--Gg~~~iDG~G~-----------~~~rp~~i~~~~~~Nv~I~gIt 149 (464)
T 1h80_A 84 VIIKPTWNGDGK-NHRLFEVGVNNIVRNFSFQGL--GNGFLVDFKDS-----------RDKNLAVFKLGDVRNYKISNFT 149 (464)
T ss_dssp CEEEECCCTTCS-CEEEEEESSSSCEEEEEEEEC--TTCEEEECTTC-----------SCCBEEEEEECSEEEEEEEEEE
T ss_pred cEEEeccCCCcc-cCCceEeecccCccceEEECc--CcceEEeCCCC-----------CCCCceEEEEEeeccEEEeeeE
Confidence 68888763 22 2224544 22333456664 4 6665321 1111122333334456677777
Q ss_pred EeeeecEEEeeeEEee-eccCcEEEeeeeeEEEeeeeeee
Q 011125 205 VIDSARIRINNCFFLH-FTTQGILVQRGHETFISSCFLGQ 243 (493)
Q Consensus 205 v~nSq~v~I~NC~~~~-fnTDGI~V~~s~~v~Isns~ig~ 243 (493)
++|+.. +.+|...+ .|||||++ .|+.+.|++|+|..
T Consensus 150 i~n~w~--ih~s~~V~i~NtDGi~i-~s~nV~I~n~~I~~ 186 (464)
T 1h80_A 150 IDDNKT--IFASILVDVTERNGRLH-WSRNGIIERIKQNN 186 (464)
T ss_dssp EECCSC--BSCSEEECEEEETTEEE-EEEEEEEEEEEEES
T ss_pred Eeccce--EeeceeeeeecCCCcee-eccCEEEeceEEec
Confidence 777544 44443222 28999999 88999999999973
No 9
>1bhe_A PEHA, polygalacturonase; family 28 glycosyl hydrolase, hydrolyses polygalacturonic acid, glycosidase; 1.90A {Pectobacterium carotovorum subsp} SCOP: b.80.1.3
Probab=99.75 E-value=1.5e-16 Score=162.37 Aligned_cols=241 Identities=16% Similarity=0.195 Sum_probs=146.3
Q ss_pred eEEeeccccCCCCCCchhHHHHHHHHHhhhccCCCcccccccccCCceEEEecC--ceEEeeccEEeCCCCcceeEeCC-
Q 011125 57 RVFYPIGYGADPTGANESSDAILQALNDAFNVQSGLELLPGVKDLGGVIIDFQG--GNYKISKPIRFPPGVGNVVVQGG- 133 (493)
Q Consensus 57 rv~nV~dYGAdptG~tDsT~Aiq~AI~~A~~~~~~~~l~pgi~~~Gga~V~lPg--GTYlIs~pI~lp~g~Gni~i~~G- 133 (493)
.+++|++|| .+|+|+|||+||+ ||+. ||.+++.|+ |+|++ +||.|++.. .+.+.+|
T Consensus 13 ~~~~v~~~G-----~~~dT~aiq~Ai~-ac~~-------------Gg~v~~~~~~~g~yl~-g~i~l~s~v-tL~l~~Ga 71 (376)
T 1bhe_A 13 SSCTTLKAD-----SSTATSTIQKALN-NCDQ-------------GKAVRLSAGSTSVFLS-GPLSLPSGV-SLLIDKGV 71 (376)
T ss_dssp CEEEEEECC-----SSBCHHHHHHHHT-TCCT-------------TCEEEEECSSSSEEEE-SCEECCTTC-EEEECTTC
T ss_pred CeEEECCCC-----CCccHHHHHHHHH-Hhcc-------------CCcEEEECCCCceEEE-eEEEECCCC-EEEECCCe
Confidence 369999986 6899999999998 5521 333444443 89987 799999764 4544433
Q ss_pred eEEecC---CCCC--------------CcceEEeccCCCcccccccceeeccc------------eeecccccCcCCccc
Q 011125 134 TLRASD---TFPS--------------DRHLIELWAPNSQKLKRTDAIKIDRN------------YVFNDVKDQTARTYY 184 (493)
Q Consensus 134 TLkAs~---~Fpg--------------d~~lI~~~~~n~~~i~G~~~GtlDg~------------w~~~c~~s~~~~~~~ 184 (493)
+|+++. .|+. ...||.+...+...+.|. |++||. |...+... ......
T Consensus 72 ~L~~s~~~~~y~~~~~~~g~~~~~g~~~~~~I~~~~~~ni~I~G~--G~IdG~G~~~~~~~~~~ww~~~~~~~-~~~~~~ 148 (376)
T 1bhe_A 72 TLRAVNNAKSFENAPSSCGVVDKNGKGCDAFITAVSTTNSGIYGP--GTIDGQGGVKLQDKKVSWWELAADAK-VKKLKQ 148 (376)
T ss_dssp EEEECSCSGGGBSSTTCSSCEESCSCCBCCSEEEESCBSCEEECS--SEEECCTTSCCSSSSSCTTHHHHHHH-HHTCEE
T ss_pred EEEeCCCHHHCcCCCccccccccCCCCcccEEEEECCEeEEEEeC--EEEECCCCcccCCCcccccccccccc-ccCccC
Confidence 899975 3432 135888877777778776 788872 32111000 000011
Q ss_pred cceeeeeeEeecceeecceEEeeee----------cEEEeeeEEeee----ccCcEEEeeeeeEEEeeeeeeeccccCCC
Q 011125 185 EDITFRDVLFDSGFRGGGIFVIDSA----------RIRINNCFFLHF----TTQGILVQRGHETFISSCFLGQRSTVGGD 250 (493)
Q Consensus 185 ~~IT~~~lv~D~n~~ggGI~v~nSq----------~v~I~NC~~~~f----nTDGI~V~~s~~v~Isns~ig~~~t~ggd 250 (493)
....+..|....+....+++++||+ .+.|.|+.+... |||||++.+|+.+.|++|+|.. ||
T Consensus 149 ~rp~~i~~~~~~nv~I~~iti~nsp~~~i~~~~~~~v~i~~v~I~~~~~~~NtDGid~~~s~nV~I~n~~i~~-----gD 223 (376)
T 1bhe_A 149 NTPRLIQINKSKNFTLYNVSLINSPNFHVVFSDGDGFTAWKTTIKTPSTARNTDGIDPMSSKNITIAYSNIAT-----GD 223 (376)
T ss_dssp CCCCSEEEESCEEEEEEEEEEECCSSCSEEEESCEEEEEEEEEEECCTTCSSCCSEEEESCEEEEEESCEEEC-----SS
T ss_pred CCCeEEEEEcceEEEEEeEEEECCCcEEEEEeCCCcEEEEeEEEECCCCCCCCceEeecCCceEEEEeCEEec-----CC
Confidence 1112333333445666777777754 455566655553 8999999999999999999962 33
Q ss_pred CCccccceEEEEE-----ccCCceeeeEEEeecceeEEEecceeEEEeeEEecccccccceeEEEeccccccceeccccc
Q 011125 251 PGEKGFSGTAIDL-----ASNDNAITDVTIFSAAIGVLLRGQANIVTRVHCYNKATAFGGIGILVKLADAALTRIDNCYL 325 (493)
Q Consensus 251 ~~e~~f~gtGI~l-----~gNd~~ItD~~i~sa~~GI~v~gq~~ii~gvh~yN~~t~~GG~Gi~~~~~~~~~~rI~ncyl 325 (493)
. ...|+- ...+-.|.++.+.+ .+||.++.+..-++++++.|+.-----.|+.+|-..-....++|-
T Consensus 224 D------cIaiks~~~~~~s~nI~I~n~~~~~-ghGisiGSe~~~v~nV~v~n~~~~~t~~GirIKt~~g~~G~v~ni-- 294 (376)
T 1bhe_A 224 D------NVAIKAYKGRAETRNISILHNDFGT-GHGMSIGSETMGVYNVTVDDLKMNGTTNGLRIKSDKSAAGVVNGV-- 294 (376)
T ss_dssp C------SEEEEECTTSCCEEEEEEEEEEECS-SSCEEEEEEESSEEEEEEEEEEEESCSEEEEEECCTTTCCEEEEE--
T ss_pred C------eEEEcccCCCCCceEEEEEeeEEEc-cccEEeccCCccEeeEEEEeeEEeCCCcEEEEEEecCCCceEeeE--
Confidence 2 455553 12233788888776 578888654324555555555433334577777321133445555
Q ss_pred ccceeeeeCC
Q 011125 326 DYTGIVLEDP 335 (493)
Q Consensus 326 dy~~iv~~d~ 335 (493)
-|..|.+++-
T Consensus 295 ~f~ni~~~~v 304 (376)
T 1bhe_A 295 RYSNVVMKNV 304 (376)
T ss_dssp EEEEEEEESC
T ss_pred EEEeEEEeCC
Confidence 5556666654
No 10
>2vbk_A Tailspike-protein; viral adhesion protein, viral protein, hydrolase, endorhamnosidase, right-handed parallel beta-helix; 1.25A {Enterobacteria phage SF6} PDB: 2vbe_A 2vbm_A*
Probab=99.66 E-value=1.7e-14 Score=151.23 Aligned_cols=158 Identities=14% Similarity=0.147 Sum_probs=102.5
Q ss_pred CCeEEeeccccCCCCCCchhHHHHHHHHHhhhccCCCcccccccccCCceEEEecCc----eEEeeccEEeCCCCcceeE
Q 011125 55 NGRVFYPIGYGADPTGANESSDAILQALNDAFNVQSGLELLPGVKDLGGVIIDFQGG----NYKISKPIRFPPGVGNVVV 130 (493)
Q Consensus 55 ~~rv~nV~dYGAdptG~tDsT~Aiq~AI~~A~~~~~~~~l~pgi~~~Gga~V~lPgG----TYlIs~pI~lp~g~Gni~i 130 (493)
..+++||+||||++||++|+|+|||+||++||+.+ ||++||+|+| +|+++++|.||++. ++..
T Consensus 48 ~s~~~NVkDFGAkGDGvTDDTaAIQkAIdaA~a~~------------GGGtVyVPaG~~~~tYlvt~tI~LkSnV-~L~G 114 (514)
T 2vbk_A 48 NKEAISILDFGVIDDGVTDNYQAIQNAIDAVASLP------------SGGELFIPASNQAVGYIVGSTLLIPGGV-NIRG 114 (514)
T ss_dssp HTTCCBGGGGCCCCSSSSCCHHHHHHHHHHHHTST------------TCEEEECCCCSSTTCEEESSCEEECTTE-EEEC
T ss_pred CCcEEEeeccCcCCCCCcccHHHHHHHHHHHhhcC------------CCeEEEECCCCcceeEEECCeEEecCCe-EEEE
Confidence 45789999999999999999999999999998542 5689999999 99999899988652 2221
Q ss_pred ------------eCCeEEecCCCCCCcceEEeccCCCcccccccceeecc---ceeecccccCcCCccccceeeeeeEee
Q 011125 131 ------------QGGTLRASDTFPSDRHLIELWAPNSQKLKRTDAIKIDR---NYVFNDVKDQTARTYYEDITFRDVLFD 195 (493)
Q Consensus 131 ------------~~GTLkAs~~Fpgd~~lI~~~~~n~~~i~G~~~GtlDg---~w~~~c~~s~~~~~~~~~IT~~~lv~D 195 (493)
..|++.++. |+ .||.+...+.+.++|+ |++|| +|....+ .......+.+|
T Consensus 115 e~~AtIl~s~~~I~GtIia~~-y~---s~I~~~~VeNIaITG~--GTIDG~g~n~t~e~~---------~~Rq~~~~~fd 179 (514)
T 2vbk_A 115 VGKASQLRAKSGLTGSVLRLS-YD---SDTIGRYLRNIRVTGN--NTCNGIDTNITAEDS---------VIRQVYGWVFD 179 (514)
T ss_dssp CSTTSEEEECTTCCSEEEEEC-CC---SCCSCEEEESCEEECC--SSSEEEEESCCTTCS---------SCCCEESEEEE
T ss_pred ecCceEeeccccccccEEecc-CC---ccccccCceEEEEECC--CeEeCCCCCccccce---------eeeccceEEee
Confidence 123333221 21 1333444456678876 88888 3321110 00012222233
Q ss_pred cceeecceEEe--eeec--EEEeeeEEeeeccCcEEEe-eeeeEEEeeeeee
Q 011125 196 SGFRGGGIFVI--DSAR--IRINNCFFLHFTTQGILVQ-RGHETFISSCFLG 242 (493)
Q Consensus 196 ~n~~ggGI~v~--nSq~--v~I~NC~~~~fnTDGI~V~-~s~~v~Isns~ig 242 (493)
+....+++.. ++.. +++..|++..+. .||++. +|+.+.|++|.|.
T Consensus 180 -nV~Vn~Vt~~v~~Sg~WTIhPi~Cqnvt~r-~gL~f~eSCrNV~IsnC~Fs 229 (514)
T 2vbk_A 180 -NVMVNEVETAYLMQGLWHSKFIACQAGTCR-VGLHFLGQCVSVSVSSCHFS 229 (514)
T ss_dssp -SCEEEEEEEEEEEESEEEEEEESCEEEEEE-EEEEEESCCEEEEEESCEEE
T ss_pred -eEEEEeEEEeEeccCcEEEeEeccCceecc-cCccccCCCCeEEEeccEEe
Confidence 3334444332 2222 667788887775 688887 7899999999985
No 11
>2x6w_A Tail spike protein; viral protein, beta-helix, hydrolase; HET: RAM GLC GLA NAG NDG; 1.35A {Enterobacteria phage HK620} PDB: 2vji_A 2vjj_A* 2x85_A* 2x6x_A* 2x6y_A*
Probab=99.64 E-value=1.9e-15 Score=163.26 Aligned_cols=191 Identities=12% Similarity=0.007 Sum_probs=119.9
Q ss_pred CCeEEeeccccCCCCCCchhHHHHHHHHHhhhccCCCcccccccccCCceEEEecCc-eEEe-----------eccEEeC
Q 011125 55 NGRVFYPIGYGADPTGANESSDAILQALNDAFNVQSGLELLPGVKDLGGVIIDFQGG-NYKI-----------SKPIRFP 122 (493)
Q Consensus 55 ~~rv~nV~dYGAdptG~tDsT~Aiq~AI~~A~~~~~~~~l~pgi~~~Gga~V~lPgG-TYlI-----------s~pI~lp 122 (493)
..++|||++|||++| +|+|||+||++ |.. .|+++|++|+| +|++ ++||.|+
T Consensus 48 ~~~~~nV~dfGA~gD----dT~AIqkAIda-Cs~------------~GGgtV~VPaG~tYLt~sv~~gp~~~~sGpI~Lk 110 (600)
T 2x6w_A 48 CDPSGNVIQPGPNVD----SRQYLQAAIDY-VSS------------NGGGTITIPAGYTWYLGSYGVGGIAGHSGIIQLR 110 (600)
T ss_dssp BCTTSCBCCCCTTCC----CHHHHHHHHHH-HHH------------TTCEEEEECTTCEEEECSCCCGGGGGGTEEEECC
T ss_pred CCcEEeeecCCCCcc----CHHHHHHHHHH-hhh------------cCCCEEEECCCCEEEecccccccccccccceEEc
Confidence 356899999999998 89999999974 532 25689999999 9998 3799998
Q ss_pred CCCcceeEeCCeEEecC---CCCCC----cce---EEeccCCCcccccccceeecc----ceeecccccCcCCcccccee
Q 011125 123 PGVGNVVVQGGTLRASD---TFPSD----RHL---IELWAPNSQKLKRTDAIKIDR----NYVFNDVKDQTARTYYEDIT 188 (493)
Q Consensus 123 ~g~Gni~i~~GTLkAs~---~Fpgd----~~l---I~~~~~n~~~i~G~~~GtlDg----~w~~~c~~s~~~~~~~~~IT 188 (493)
+.. .+ ..+|+|++++ +||.. ..| |.+...+...+.|+ |+||| ||. ++ ...|..-.
T Consensus 111 SnV-tL-~LdGtL~as~d~~~yp~~~~v~~~w~slI~~~~~~NItItG~--GtIDGqG~~wW~----~~---~~~~~RP~ 179 (600)
T 2x6w_A 111 SNV-NL-NIEGRIHLSPFFDLKPFQVFVGFDNGDPASSGNLENCHIYGH--GVVDFGGYEFGA----SS---QLRNGVAF 179 (600)
T ss_dssp TTE-EE-EECSEEEECGGGTTSCEEEEECCSSSSGGGCCCEEEEEEESS--CEEECTTCCCSS----TT---CCEEEEEC
T ss_pred Cce-EE-eeecEEEEcCChHHCcccccccccccceEEEecceeEEEecc--eeeeCCcccccc----cc---ccCCCCCE
Confidence 653 23 6778999986 44431 123 44444455678776 89999 443 11 11111111
Q ss_pred eeeeEeecceeecceEEeee-ec--EEE---eeeEEee-------------eccCcEEEeeeeeEEEeeeeeeeccccCC
Q 011125 189 FRDVLFDSGFRGGGIFVIDS-AR--IRI---NNCFFLH-------------FTTQGILVQRGHETFISSCFLGQRSTVGG 249 (493)
Q Consensus 189 ~~~lv~D~n~~ggGI~v~nS-q~--v~I---~NC~~~~-------------fnTDGI~V~~s~~v~Isns~ig~~~t~gg 249 (493)
+ .| ..+. ..||+++|| +. +++ .+|+... -||||| +.|+||+|..-
T Consensus 180 l-~f-~~c~--I~GITi~NSDP~w~I~iG~~~~c~NVtI~nvtfi~aI~sspNTDGI-------V~I~nc~I~tG----- 243 (600)
T 2x6w_A 180 G-RS-YNCS--VTGITFQNGDVTWAITLGWNGYGSNCYVRKCRFINLVNSSVNADHS-------TVYVNCPYSGV----- 243 (600)
T ss_dssp C-SE-EEEE--EESCEEESCCCSCSEEECBTTBEEEEEEESCEEECCCCCSSCCCEE-------EEEECSSSEEE-----
T ss_pred E-EE-eeeE--EeCeEEECCCCccEEEeCCCCCcccEEEeCeEEcceEecCCCCCEE-------EEEEeeEEecC-----
Confidence 1 11 1222 677778777 54 445 4444332 269999 99999999632
Q ss_pred CCCccccceEEEEE-ccC--CceeeeEEEeecceeEEEecc-eeEEEeeEEec
Q 011125 250 DPGEKGFSGTAIDL-ASN--DNAITDVTIFSAAIGVLLRGQ-ANIVTRVHCYN 298 (493)
Q Consensus 250 d~~e~~f~gtGI~l-~gN--d~~ItD~~i~sa~~GI~v~gq-~~ii~gvh~yN 298 (493)
|. . |.+ .++ .+.... .+.++..||.++.+ ...++++++.|
T Consensus 244 DD------C--IAI~KSGs~~ni~~e-~~~~GHgGISIGSe~~ggV~NV~V~N 287 (600)
T 2x6w_A 244 ES------C--YFSMSSSFARNIACS-VQLHQHDTFYRGSTVNGYCRGAYVVM 287 (600)
T ss_dssp ES------C--EEECCCTTHHHHEEE-EEECSSSEEEESCEEEEESEEEEEEE
T ss_pred Cc------E--EEEecCCCcCCeEEE-EEcCCCCcEEecccccCcEEEEEEEE
Confidence 22 2 444 322 111222 34455568988754 34678888776
No 12
>2iq7_A Endopolygalacturonase; parallel beta helix, hydrolase; HET: NAG MAN PG4; 1.94A {Colletotrichum lupini}
Probab=99.48 E-value=2.3e-12 Score=130.21 Aligned_cols=219 Identities=15% Similarity=0.138 Sum_probs=132.2
Q ss_pred hhHHHHHHHHHhhhccCCCcccccccccCCceEEEecCceEEeeccE-EeCCCCcceeEeCCeEEec-CCCCCCcceEEe
Q 011125 73 ESSDAILQALNDAFNVQSGLELLPGVKDLGGVIIDFQGGNYKISKPI-RFPPGVGNVVVQGGTLRAS-DTFPSDRHLIEL 150 (493)
Q Consensus 73 DsT~Aiq~AI~~A~~~~~~~~l~pgi~~~Gga~V~lPgGTYlIs~pI-~lp~g~Gni~i~~GTLkAs-~~Fpgd~~lI~~ 150 (493)
.+|+|||+||+++. . .|+++|++|+|+|+. | .|..+ -.+..+|+++++ ..+.+ .||.+
T Consensus 6 ~dt~aiq~ai~~c~-~------------~~g~~v~vP~G~~~~---l~~l~~~--~~l~~~g~~~~~~~~w~g--~~i~~ 65 (339)
T 2iq7_A 6 TDAAAAIKGKASCT-S------------IILNGIVVPAGTTLD---MTGLKSG--TTVTFQGKTTFGYKEWEG--PLISF 65 (339)
T ss_dssp SCHHHHHHHGGGCS-E------------EEEESCEECTTCCEE---ECSCCTT--CEEEEESEEEECCCCSCC--CSEEE
T ss_pred CCHHHHHHHHHHhh-c------------cCCCeEEECCCEEEE---eeccCCC--eEEEEeCcEEcccccccC--cEEEE
Confidence 46999999997532 1 246789999999974 4 22333 233667888875 23332 47877
Q ss_pred ccCCCcccccccceeecc----ceeecccccCcCCccccce-eeeeeEeecceeecceEEeee----------ecEEEee
Q 011125 151 WAPNSQKLKRTDAIKIDR----NYVFNDVKDQTARTYYEDI-TFRDVLFDSGFRGGGIFVIDS----------ARIRINN 215 (493)
Q Consensus 151 ~~~n~~~i~G~~~GtlDg----~w~~~c~~s~~~~~~~~~I-T~~~lv~D~n~~ggGI~v~nS----------q~v~I~N 215 (493)
.. +...+.|...|+||| ||...+.. .+... .+..|....+....+++++|| +.+.|.+
T Consensus 66 ~~-~nv~I~G~~gG~IdG~G~~~w~~~~~~------~~~~rp~~i~~~~~~nv~i~giti~nsp~~~i~i~~~~nv~i~~ 138 (339)
T 2iq7_A 66 SG-TNININGASGHSIDCQGSRWWDSKGSN------GGKTKPKFFYAHSLKSSNIKGLNVLNTPVQAFSINSATTLGVYD 138 (339)
T ss_dssp EE-ESCEEEECTTCEEECCGGGTCCSCGGG------SSSCCCCCEEEEEEEEEEEECCEEECCSSCCEEEESCEEEEEES
T ss_pred Ec-ccEEEEcCCCCEEECCccccccccccc------CCCCCCeEEEEeeeCcEEEEEEEEEeCCcceEEEeccCCEEEEE
Confidence 66 566788754579999 55422211 01111 222233333445555555554 4466666
Q ss_pred eEEee--------eccCcEEEeeeeeEEEeeeeeeeccccCCCCCccccceEEEEEc-cCCceeeeEEEeecceeEEEec
Q 011125 216 CFFLH--------FTTQGILVQRGHETFISSCFLGQRSTVGGDPGEKGFSGTAIDLA-SNDNAITDVTIFSAAIGVLLRG 286 (493)
Q Consensus 216 C~~~~--------fnTDGI~V~~s~~v~Isns~ig~~~t~ggd~~e~~f~gtGI~l~-gNd~~ItD~~i~sa~~GI~v~g 286 (493)
|.+.. .|||||++..|+.+.|++|+|.. ||. + |.+. +.+-.|.++.+.++ +||.+..
T Consensus 139 ~~I~~~~~d~~~~~ntDGid~~~s~nV~I~n~~i~~-----gDD------c--iaiksg~nI~i~n~~~~~g-hGisiGS 204 (339)
T 2iq7_A 139 VIIDNSAGDSAGGHNTDAFDVGSSTGVYISGANVKN-----QDD------C--LAINSGTNITFTGGTCSGG-HGLSIGS 204 (339)
T ss_dssp CEEECGGGGGTTCCSCCSEEEESCEEEEEESCEEEC-----SSC------S--EEESSEEEEEEESCEEESS-CCEEEEE
T ss_pred EEEECCccccccCCCCCcEEEcCcceEEEEecEEec-----CCC------E--EEEcCCccEEEEeEEEECC-ceEEECc
Confidence 66653 27999999999999999999962 222 2 4444 33447888887775 5898842
Q ss_pred --c--eeEEEeeEEecccccccceeEEEeccccccceecccccccceeeeeC
Q 011125 287 --Q--ANIVTRVHCYNKATAFGGIGILVKLADAALTRIDNCYLDYTGIVLED 334 (493)
Q Consensus 287 --q--~~ii~gvh~yN~~t~~GG~Gi~~~~~~~~~~rI~ncyldy~~iv~~d 334 (493)
+ ...++++++.|+.-.--..|+.+|-..-....++|- -|..|.+++
T Consensus 205 lg~~~~~~v~nV~v~n~~~~~~~~girIkt~~g~~G~v~nI--~~~ni~~~~ 254 (339)
T 2iq7_A 205 VGGRSDNTVKTVTISNSKIVNSDNGVRIKTVSGATGSVSGV--TYSGITLSN 254 (339)
T ss_dssp ESSSSCCEEEEEEEEEEEEESCSEEEEEEEETTCCCEEEEE--EEEEEEEEE
T ss_pred CCcccCCCEEEEEEEeeEEECCCcEEEEEEeCCCCeEEEEE--EEEeEEccC
Confidence 2 235777777776543345678887321123445555 555666665
No 13
>1hg8_A Endopolygalacturonase; hydrolase, pectin degradation; HET: NAG; 1.73A {Fusarium moniliforme} SCOP: b.80.1.3
Probab=99.48 E-value=2.1e-12 Score=131.20 Aligned_cols=223 Identities=11% Similarity=0.078 Sum_probs=135.2
Q ss_pred hHHHHHHHHHhhhccCCCcccccccccCCceEEEecCceEEeeccEEeCCCCcceeEeCCeEEec-CCCCCCcceEEecc
Q 011125 74 SSDAILQALNDAFNVQSGLELLPGVKDLGGVIIDFQGGNYKISKPIRFPPGVGNVVVQGGTLRAS-DTFPSDRHLIELWA 152 (493)
Q Consensus 74 sT~Aiq~AI~~A~~~~~~~~l~pgi~~~Gga~V~lPgGTYlIs~pI~lp~g~Gni~i~~GTLkAs-~~Fpgd~~lI~~~~ 152 (493)
+|+|||+|++++. . .|+++|++|+|+|+. |+ +.+.+-.+..+|+++++ ..++. ..||.+..
T Consensus 7 ~t~aiq~ai~~c~-~------------~gg~~v~vP~G~~l~---l~-~l~~~~~l~~~g~~~~~~~~w~~-g~~i~~~~ 68 (349)
T 1hg8_A 7 EYSGLATAVSSCK-N------------IVLNGFQVPTGKQLD---LS-SLQNDSTVTFKGTTTFATTADND-FNPIVISG 68 (349)
T ss_dssp SGGGHHHHHHHCS-E------------EEECCCEECTTCCEE---ET-TCCTTCEEEECSEEEECCCCCTT-CCSEEEEE
T ss_pred CHHHHHHHHHhcc-c------------cCCCEEEECCCEEEE---ee-ccCCCeEEEEcCceecccccccC-CceEEEEC
Confidence 5899999997632 1 245799999999974 31 22222334667888875 33422 34788865
Q ss_pred CCCcccccccceeecc----ceeecccccCcCCccccceeeeee-E-eecceeecceEEeeee----------cEEEeee
Q 011125 153 PNSQKLKRTDAIKIDR----NYVFNDVKDQTARTYYEDITFRDV-L-FDSGFRGGGIFVIDSA----------RIRINNC 216 (493)
Q Consensus 153 ~n~~~i~G~~~GtlDg----~w~~~c~~s~~~~~~~~~IT~~~l-v-~D~n~~ggGI~v~nSq----------~v~I~NC 216 (493)
+...+.|...|+||| ||...+.. ...+....+..| . ...+....|++++||+ .+.|.++
T Consensus 69 -~ni~I~G~~~G~IdG~G~~ww~~~~~~----~~~~~rP~~i~~~~~~~~nv~I~giti~nsp~~~i~i~~~~nv~i~~~ 143 (349)
T 1hg8_A 69 -SNITITGASGHVIDGNGQAYWDGKGSN----SNSNQKPDHFIVVQKTTGNSKITNLNIQNWPVHCFDITGSSQLTISGL 143 (349)
T ss_dssp -ESCEEEECTTCEEECCGGGTCCSCTTC----TTSCCCCSEEEEEEEEESSEEEESCEEECCSSEEEEEESCEEEEEEEE
T ss_pred -ccEEEEecCCCEEcCCcchhhhccccc----CCCCCCCeEEEEeecCcCcEEEEEEEEEcCCCceEEEeccCCEEEEEE
Confidence 566788844489999 55422211 001011123333 2 2335667777777654 4666666
Q ss_pred EEee----------------eccCcEEEeeeeeEEEeeeeeeeccccCCCCCccccceEEEEEc-cCCceeeeEEEeecc
Q 011125 217 FFLH----------------FTTQGILVQRGHETFISSCFLGQRSTVGGDPGEKGFSGTAIDLA-SNDNAITDVTIFSAA 279 (493)
Q Consensus 217 ~~~~----------------fnTDGI~V~~s~~v~Isns~ig~~~t~ggd~~e~~f~gtGI~l~-gNd~~ItD~~i~sa~ 279 (493)
.+.. .|||||++..|+.+.|++|+|.. ||. + |.+. |.+-.|.|+.+.++
T Consensus 144 ~I~~~~~~~~~~~~~~~~~~~NtDGid~~~s~nV~I~n~~i~~-----gDD------c--Iaiksg~nI~i~n~~~~~g- 209 (349)
T 1hg8_A 144 ILDNRAGDKPNAKSGSLPAAHNTDGFDISSSDHVTLDNNHVYN-----QDD------C--VAVTSGTNIVVSNMYCSGG- 209 (349)
T ss_dssp EEECGGGSSCCTTTTTSCSCCSCCSEEEESCEEEEEEEEEEEC-----SSC------S--EEESSEEEEEEEEEEEESS-
T ss_pred EEECCCCccccccccccccCCCCCeEEEccccEEEEEeeEEec-----CCC------e--EEeeCCeEEEEEeEEEeCC-
Confidence 6653 46999999999999999999962 222 2 4444 33447888887764
Q ss_pred eeEEEec--c--eeEEEeeEEecccccccceeEEEeccccccceecccccccceeeeeCC
Q 011125 280 IGVLLRG--Q--ANIVTRVHCYNKATAFGGIGILVKLADAALTRIDNCYLDYTGIVLEDP 335 (493)
Q Consensus 280 ~GI~v~g--q--~~ii~gvh~yN~~t~~GG~Gi~~~~~~~~~~rI~ncyldy~~iv~~d~ 335 (493)
+||.+.. + ...++++++.|+.-.-..-|+++|-..-....++|- -|..|.+++.
T Consensus 210 hGisiGS~G~~~~~~v~nV~v~n~~~~~~~~GirIKt~~g~~G~v~nI--~~~ni~~~~v 267 (349)
T 1hg8_A 210 HGLSIGSVGGKSDNVVDGVQFLSSQVVNSQNGCRIKSNSGATGTINNV--TYQNIALTNI 267 (349)
T ss_dssp CCEEEEEESSSSCCEEEEEEEEEEEEEEEEEEEEEEEETTCCEEEEEE--EEEEEEEEEE
T ss_pred cceEEccccccccCCEEEEEEEEEEEECCCcEEEEEecCCCCccccce--EEEEEEEEcc
Confidence 5898853 2 245667776666544444578888322123445555 5666666664
No 14
>1nhc_A Polygalacturonase I; beta-helix, hydrolase; HET: MAN NAG BMA; 1.70A {Aspergillus niger} SCOP: b.80.1.3
Probab=99.42 E-value=8.7e-12 Score=125.90 Aligned_cols=220 Identities=15% Similarity=0.146 Sum_probs=130.7
Q ss_pred hhHHHHHHHHHhhhccCCCcccccccccCCceEEEecCceEEeeccE-EeCCCCcceeEeCCeEEecC-CCCCCcceEEe
Q 011125 73 ESSDAILQALNDAFNVQSGLELLPGVKDLGGVIIDFQGGNYKISKPI-RFPPGVGNVVVQGGTLRASD-TFPSDRHLIEL 150 (493)
Q Consensus 73 DsT~Aiq~AI~~A~~~~~~~~l~pgi~~~Gga~V~lPgGTYlIs~pI-~lp~g~Gni~i~~GTLkAs~-~Fpgd~~lI~~ 150 (493)
.+|+|||+||+++ +. .|+++|++|+|+|+. | .|..+ -.+...|+++++. .+.+ .||.+
T Consensus 6 ~~t~aiq~ai~~c-~~------------~gg~~v~vP~G~~~~---l~~l~~~--~~l~~~g~~~~~~~~w~g--~li~~ 65 (336)
T 1nhc_A 6 TSASEASESISSC-SD------------VVLSSIEVPAGETLD---LSDAADG--STITFEGTTSFGYKEWKG--PLIRF 65 (336)
T ss_dssp SSHHHHHHHGGGC-SE------------EEEESCEECTTCCEE---CTTCCTT--CEEEEESEEEECCCCSCC--CSEEC
T ss_pred CCHHHHHHHHHHh-hc------------cCCCeEEECCCEEEE---eeccCCC--eEEEEeceEEcccccccC--cEEEE
Confidence 4699999999753 21 245789999999973 3 22232 2336678888752 3332 47777
Q ss_pred ccCCCcccccccceeecc----ceeecccccCcCCccccc-eeeeeeEeecceeecceEEee---------eecEEEeee
Q 011125 151 WAPNSQKLKRTDAIKIDR----NYVFNDVKDQTARTYYED-ITFRDVLFDSGFRGGGIFVID---------SARIRINNC 216 (493)
Q Consensus 151 ~~~n~~~i~G~~~GtlDg----~w~~~c~~s~~~~~~~~~-IT~~~lv~D~n~~ggGI~v~n---------Sq~v~I~NC 216 (493)
.. +...+.|...|++|| ||...+.. .+.. ..+..|....+....+++++| ++.+.|.||
T Consensus 66 ~~-~nv~I~G~~gG~IdG~G~~~w~~~~~~------~~~~rp~~i~~~~~~nv~i~~i~i~nsp~~~i~i~~~nv~i~~~ 138 (336)
T 1nhc_A 66 GG-KDLTVTMADGAVIDGDGSRWWDSKGTN------GGKTKPKFMYIHDVEDSTFKGINIKNTPVQAISVQATNVHLNDF 138 (336)
T ss_dssp CE-ESCEEEECTTCEEECCGGGTCCSCTTT------SSSCCCCCEEEEEEEEEEEESCEEECCSSCCEEEEEEEEEEESC
T ss_pred ec-CCEEEEcCCCeEEECCccccccccCcC------CCCCCceEEEEeeeCcEEEEEEEEEeCCccEEEEEeCCEEEEEE
Confidence 55 556777754479999 55422211 0111 122222223334444444444 555666666
Q ss_pred EEee--------eccCcEEEeeeeeEEEeeeeeeeccccCCCCCccccceEEEEEc-cCCceeeeEEEeecceeEEEec-
Q 011125 217 FFLH--------FTTQGILVQRGHETFISSCFLGQRSTVGGDPGEKGFSGTAIDLA-SNDNAITDVTIFSAAIGVLLRG- 286 (493)
Q Consensus 217 ~~~~--------fnTDGI~V~~s~~v~Isns~ig~~~t~ggd~~e~~f~gtGI~l~-gNd~~ItD~~i~sa~~GI~v~g- 286 (493)
.+.. .|||||++.+|+.+.|++|+|.. ||. +|.+. |.+-.|.++.+.++ +||.+..
T Consensus 139 ~I~~~~~d~~~~~ntDGidi~~s~nV~I~n~~i~~-----gDD--------ciaiksg~nI~i~n~~~~~g-hGisiGS~ 204 (336)
T 1nhc_A 139 TIDNSDGDDNGGHNTDGFDISESTGVYISGATVKN-----QDD--------CIAINSGESISFTGGTCSGG-HGLSIGSV 204 (336)
T ss_dssp EEECTTHHHHTCCSCCSEEECSCEEEEEESCEEES-----SSE--------EEEESSEEEEEEESCEEESS-SEEEEEEE
T ss_pred EEECCCcccccCCCCCcEEecCCCeEEEEeCEEEc-----CCC--------EEEEeCCeEEEEEeEEEECC-cCceEccC
Confidence 6664 37999999999999999999962 221 24444 33447788877764 5899842
Q ss_pred -c--eeEEEeeEEecccccccceeEEEeccccccceecccccccceeeeeCC
Q 011125 287 -Q--ANIVTRVHCYNKATAFGGIGILVKLADAALTRIDNCYLDYTGIVLEDP 335 (493)
Q Consensus 287 -q--~~ii~gvh~yN~~t~~GG~Gi~~~~~~~~~~rI~ncyldy~~iv~~d~ 335 (493)
+ ...++++++.|+.-.--..|+.+|...-....++|- -|..|.+++.
T Consensus 205 g~~~~~~v~nV~v~n~~~~~t~~girIkt~~g~~G~v~nI--~~~ni~~~~v 254 (336)
T 1nhc_A 205 GGRDDNTVKNVTISDSTVSNSANGVRIKTIYKETGDVSEI--TYSNIQLSGI 254 (336)
T ss_dssp SSSSCCEEEEEEEEEEEEESCSEEEEEEEETTCCCEEEEE--EEEEEEEEEE
T ss_pred ccccCCCEEEEEEEeeEEECCCcEEEEEEECCCCCEEeee--EEeeEEeecc
Confidence 2 235777777776543345577777321123345555 5666666654
No 15
>1czf_A Polygalacturonase II; beta helix, hydrolase; HET: NAG; 1.68A {Aspergillus niger} SCOP: b.80.1.3
Probab=99.38 E-value=8.9e-12 Score=127.43 Aligned_cols=217 Identities=13% Similarity=0.089 Sum_probs=134.1
Q ss_pred HHHHHHHHHhhhccCCCcccccccccCCceEEEecCceEEeeccEEeCCCCcceeEeCCeEEec-CCCCCCcceEEeccC
Q 011125 75 SDAILQALNDAFNVQSGLELLPGVKDLGGVIIDFQGGNYKISKPIRFPPGVGNVVVQGGTLRAS-DTFPSDRHLIELWAP 153 (493)
Q Consensus 75 T~Aiq~AI~~A~~~~~~~~l~pgi~~~Gga~V~lPgGTYlIs~pI~lp~g~Gni~i~~GTLkAs-~~Fpgd~~lI~~~~~ 153 (493)
++|||+||++ |+. .++.+|++|+|+|+. |+ ..+.+-.+..+|+++++ ..+++ .||.+..
T Consensus 35 ~~aiq~ai~~-c~~------------~~g~~v~vP~G~~l~---l~-~l~~~~~l~~~g~~~~~~~~w~g--~~i~~~~- 94 (362)
T 1czf_A 35 AAAAKAGKAK-CST------------ITLNNIEVPAGTTLD---LT-GLTSGTKVIFEGTTTFQYEEWAG--PLISMSG- 94 (362)
T ss_dssp HHHHHHHGGG-CSE------------EEEESCEECTTCCEE---EC-SCCTTCEEEEESEEEECCCCSCC--CSEEEEE-
T ss_pred HHHHHHHHHH-hhc------------cCCCEEEECCCEEEE---ee-ccCCCeEEEEeCcEEeccccCCC--cEEEEeC-
Confidence 6899999965 321 245789999999973 32 22222233667888874 34443 4888755
Q ss_pred CCcccccccceeecc----ceeecccccCcCCccccc-eeeeeeEeecceeecceEEee---------eecEEEeeeEEe
Q 011125 154 NSQKLKRTDAIKIDR----NYVFNDVKDQTARTYYED-ITFRDVLFDSGFRGGGIFVID---------SARIRINNCFFL 219 (493)
Q Consensus 154 n~~~i~G~~~GtlDg----~w~~~c~~s~~~~~~~~~-IT~~~lv~D~n~~ggGI~v~n---------Sq~v~I~NC~~~ 219 (493)
+...+.|...|++|| ||...+. .+.. ..+..|....+....+++++| |+.+.|+||.+.
T Consensus 95 ~nv~I~G~~~g~IdG~G~~~w~~~~~-------~~~~rP~~i~~~~~~nv~i~~iti~nsp~~~i~i~~~nv~i~~~~I~ 167 (362)
T 1czf_A 95 EHITVTGASGHLINCDGARWWDGKGT-------SGKKKPKFFYAHGLDSSSITGLNIKNTPLMAFSVQANDITFTDVTIN 167 (362)
T ss_dssp ESCEEEECTTCEEECCGGGTCCSCTT-------SSSCCCCCEEEEEEETEEEESCEEECCSSCCEEEECSSEEEESCEEE
T ss_pred ccEEEEcCCCcEEECCCchhhcccCC-------CCCCCCeEEEEeecccEEEEEEEEecCCccEEEEeeCCEEEEEEEEE
Confidence 556788743489999 5542111 0111 122222333344444444444 566778888777
Q ss_pred e--------eccCcEEEeeeeeEEEeeeeeeeccccCCCCCccccceEEEEEc-cCCceeeeEEEeecceeEEEec--c-
Q 011125 220 H--------FTTQGILVQRGHETFISSCFLGQRSTVGGDPGEKGFSGTAIDLA-SNDNAITDVTIFSAAIGVLLRG--Q- 287 (493)
Q Consensus 220 ~--------fnTDGI~V~~s~~v~Isns~ig~~~t~ggd~~e~~f~gtGI~l~-gNd~~ItD~~i~sa~~GI~v~g--q- 287 (493)
. .|||||++..|+.+.|+||+|.. ||. . |.+. |.+-.|.|+.+.++ +||.+.- +
T Consensus 168 ~~~~d~~~~~NtDGidi~~s~nV~I~n~~i~~-----gDD------c--Iaiksg~nI~i~n~~~~~g-hGisiGS~G~~ 233 (362)
T 1czf_A 168 NADGDTQGGHNTDAFDVGNSVGVNIIKPWVHN-----QDD------C--LAVNSGENIWFTGGTCIGG-HGLSIGSVGDR 233 (362)
T ss_dssp CGGGGTTTCCSCCSEEECSCEEEEEESCEEEC-----SSC------S--EEESSEEEEEEESCEEESS-CCEEEEEECSS
T ss_pred CCccccccCCCCCceeecCcceEEEEeeEEec-----CCC------E--EEEeCCeEEEEEEEEEeCC-ceeEEeecccc
Confidence 5 37999999999999999999962 232 2 4444 23457888877765 5898853 2
Q ss_pred -eeEEEeeEEecccccccceeEEEec-cccccceecccccccceeeeeCC
Q 011125 288 -ANIVTRVHCYNKATAFGGIGILVKL-ADAALTRIDNCYLDYTGIVLEDP 335 (493)
Q Consensus 288 -~~ii~gvh~yN~~t~~GG~Gi~~~~-~~~~~~rI~ncyldy~~iv~~d~ 335 (493)
...++++++.|+.-.--..|+.+|- ++ ....++|- -|..|.+++.
T Consensus 234 ~~~~v~nV~v~n~~~~~t~~GirIKt~~g-~~G~v~nI--~~~ni~~~~v 280 (362)
T 1czf_A 234 SNNVVKNVTIEHSTVSNSENAVRIKTISG-ATGSVSEI--TYSNIVMSGI 280 (362)
T ss_dssp SCCEEEEEEEEEEEEEEEEEEEEEEEETT-CCEEEEEE--EEEEEEEEEE
T ss_pred CCCCEEEEEEEeeEEECCceEEEEEEeCC-CCceEeeE--EEEeEEEECc
Confidence 2468888888876444456788883 22 33456665 5666666654
No 16
>1ia5_A Polygalacturonase; glycosylhydrolase, hydrolase; HET: MAN NAG; 2.00A {Aspergillus aculeatus} SCOP: b.80.1.3 PDB: 1ib4_A*
Probab=99.38 E-value=1.1e-11 Score=125.46 Aligned_cols=219 Identities=11% Similarity=0.086 Sum_probs=129.6
Q ss_pred hhHHHHHHHHHhhhccCCCcccccccccCCceEEEecCceEEeeccE-EeCCCCcceeEeCCeEEec-CCCCCCcceEEe
Q 011125 73 ESSDAILQALNDAFNVQSGLELLPGVKDLGGVIIDFQGGNYKISKPI-RFPPGVGNVVVQGGTLRAS-DTFPSDRHLIEL 150 (493)
Q Consensus 73 DsT~Aiq~AI~~A~~~~~~~~l~pgi~~~Gga~V~lPgGTYlIs~pI-~lp~g~Gni~i~~GTLkAs-~~Fpgd~~lI~~ 150 (493)
+-++|||+||+++. . .|+.+|++|+|+|+. | .|.++ -.+..+|+++++ ..+.+ .||.+
T Consensus 10 ~g~~aiq~ai~~c~-~------------~gg~~v~vP~G~~l~---l~~l~~~--~~l~~~g~~~~~~~~w~g--~li~~ 69 (339)
T 1ia5_A 10 NGASSASKSKTSCS-T------------IVLSNVAVPSGTTLD---LTKLNDG--THVIFSGETTFGYKEWSG--PLISV 69 (339)
T ss_dssp GHHHHHHHHGGGCS-E------------EEEESCEECTTCCEE---ECSCCTT--CEEEEESEEEECCCCSCC--CSEEE
T ss_pred cchHHHHHHHHHhh-c------------cCCCeEEECCCEEEE---eeccCCC--eEEEEeCcEEcccccccC--cEEEE
Confidence 45789999997532 1 246789999999974 4 22333 233667888875 33432 47877
Q ss_pred ccCCCcccccccceeecc----ceeecccccCcCCccccce-eeeeeEeecceeecceEEee----------eecEEEee
Q 011125 151 WAPNSQKLKRTDAIKIDR----NYVFNDVKDQTARTYYEDI-TFRDVLFDSGFRGGGIFVID----------SARIRINN 215 (493)
Q Consensus 151 ~~~n~~~i~G~~~GtlDg----~w~~~c~~s~~~~~~~~~I-T~~~lv~D~n~~ggGI~v~n----------Sq~v~I~N 215 (493)
.. +...+.|...|++|| ||...+.. .+... .+..|....+....+++++| |+.+.|.|
T Consensus 70 ~~-~nv~I~G~~gG~IdG~G~~~w~~~~~~------~~~~rp~~i~~~~~~nv~i~~i~i~nsp~~~i~i~~~~nv~i~~ 142 (339)
T 1ia5_A 70 SG-SDLTITGASGHSINGDGSRWWDGEGGN------GGKTKPKFFAAHSLTNSVISGLKIVNSPVQVFSVAGSDYLTLKD 142 (339)
T ss_dssp EE-ESCEEEECTTCEEECCGGGTCSSCTTT------SSSCCCCCEEEEEEEEEEEESCEEECCSSCCEEEESCEEEEEES
T ss_pred Ec-CcEEEEcCCCeEEeCCCCccccccccC------CCCCCCeEEEEeecCcEEEEEEEEEcCCcceEEEecccCeEEee
Confidence 66 556788754479999 55422111 01111 22223333344555555555 45566666
Q ss_pred eEEee--------eccCcEEEeeeeeEEEeeeeeeeccccCCCCCccccceEEEEEc-cCCceeeeEEEeecceeEEEec
Q 011125 216 CFFLH--------FTTQGILVQRGHETFISSCFLGQRSTVGGDPGEKGFSGTAIDLA-SNDNAITDVTIFSAAIGVLLRG 286 (493)
Q Consensus 216 C~~~~--------fnTDGI~V~~s~~v~Isns~ig~~~t~ggd~~e~~f~gtGI~l~-gNd~~ItD~~i~sa~~GI~v~g 286 (493)
|.+.. .|||||++..|+.+.|++|+|.. +|. . |.+. |.+-.|.++.+.++ +||.+..
T Consensus 143 ~~I~~~~~d~~~~~ntDGid~~~s~nV~I~n~~i~~-----gDD------c--Iaiksg~nI~i~n~~~~~g-hGisiGS 208 (339)
T 1ia5_A 143 ITIDNSDGDDNGGHNTDAFDIGTSTYVTISGATVYN-----QDD------C--VAVNSGENIYFSGGYCSGG-HGLSIGS 208 (339)
T ss_dssp CEEECGGGTTTTCCSCCSEEEESCEEEEEESCEEEC-----SSC------S--EEESSEEEEEEESCEEESS-SCEEEEE
T ss_pred EEEECCccccccCCCCCcEEecCCceEEEEeeEEEc-----CCC------e--EEEeCCeEEEEEeEEEECC-ceEEECc
Confidence 66664 37999999999999999999962 222 2 4444 33447788877764 5888842
Q ss_pred --c--eeEEEeeEEecccccccceeEEEeccccccceecccccccceeeeeC
Q 011125 287 --Q--ANIVTRVHCYNKATAFGGIGILVKLADAALTRIDNCYLDYTGIVLED 334 (493)
Q Consensus 287 --q--~~ii~gvh~yN~~t~~GG~Gi~~~~~~~~~~rI~ncyldy~~iv~~d 334 (493)
. ...++++++.|+.-.--..|+.+|-..-....++|- -|..|.+++
T Consensus 209 ~g~~~~~~v~nV~v~n~~~~~t~~girIKt~~g~~G~v~nI--~~~ni~~~~ 258 (339)
T 1ia5_A 209 VGGRSDNTVKNVTFVDSTIINSDNGVRIKTNIDTTGSVSDV--TYKDITLTS 258 (339)
T ss_dssp ECSSSCCEEEEEEEEEEEEESCSEEEEEEEETTCCCEEEEE--EEEEEEEEE
T ss_pred CCcccCCCEEEEEEEeeEEECCCcEEEEEEeCCCCcEEEee--EEEEEEEEC
Confidence 2 235777777777544445677777311122334444 444454443
No 17
>2inu_A Insulin fructotransferase; right-handed parallel beta-helix, lyase; 1.80A {Bacillus SP} PDB: 2inv_A*
Probab=99.35 E-value=6.8e-11 Score=123.08 Aligned_cols=247 Identities=16% Similarity=0.217 Sum_probs=153.6
Q ss_pred CCeEEeeccc----cCCCCCCchhHHHHHHHHHhhhccCCCcccccccccCCceEEEecCceEEeeccEEeC-CCCccee
Q 011125 55 NGRVFYPIGY----GADPTGANESSDAILQALNDAFNVQSGLELLPGVKDLGGVIIDFQGGNYKISKPIRFP-PGVGNVV 129 (493)
Q Consensus 55 ~~rv~nV~dY----GAdptG~tDsT~Aiq~AI~~A~~~~~~~~l~pgi~~~Gga~V~lPgGTYlIs~pI~lp-~g~Gni~ 129 (493)
+...|||++| +|.+++.+|.+++|+++|.+.-+.+....-.| |.+|+||+|+|++.+|+.+. |+. .|.
T Consensus 11 ~~~~~~vt~~~~~~~~~~~~~~d~~~~i~~~ia~~~~~~~~~~A~p------GdvI~L~~G~Y~l~g~ivIdkp~L-tL~ 83 (410)
T 2inu_A 11 SPNTYDVTTWRIKAHPEVTAQSDIGAVINDIIADIKQRQTSPDARP------GAAIIIPPGDYDLHTQVVVDVSYL-TIA 83 (410)
T ss_dssp -CCEEETTTCCBTTBTTCCHHHHHHHHHHHHHHHHHHHCCCTTSCC------CEEEECCSEEEEECSCEEECCTTE-EEE
T ss_pred cCceEEEEEecccCCCcCCCchhHHHHHHHHHHHhhcccccccCCC------CCEEEECCCeeccCCcEEEecCcE-EEE
Confidence 4568999999 89999999999999999999866554443333 78999999999865566665 421 111
Q ss_pred EeC-Ce----EE------ecCC-CCCCcceEEeccCCC----cccccccceeeccceeecccccCcCCccccceeeeeeE
Q 011125 130 VQG-GT----LR------ASDT-FPSDRHLIELWAPNS----QKLKRTDAIKIDRNYVFNDVKDQTARTYYEDITFRDVL 193 (493)
Q Consensus 130 i~~-GT----Lk------As~~-Fpgd~~lI~~~~~n~----~~i~G~~~GtlDg~w~~~c~~s~~~~~~~~~IT~~~lv 193 (493)
..+ |+ |+ +.-. .++. ..|....+.. +.+++. ..---..+++++|.
T Consensus 84 G~~~g~~s~~Id~~~~~~g~~~~~g~G-s~I~V~a~~~~g~a~~V~~~------------------g~~r~s~V~~~~v~ 144 (410)
T 2inu_A 84 GFGHGFFSRSILDNSNPTGWQNLQPGA-SHIRVLTSPSAPQAFLVKRA------------------GDPRLSGIVFRDFC 144 (410)
T ss_dssp CSCCCCCCHHHHHTSCCTTCSCCSCCS-EEEEECCCTTSCEEEEECCC------------------SSSCEECCEEESCE
T ss_pred ecCCCcceeEEecccccCcccccCCCC-cEEEEeccccccceeEEeec------------------cCcccCCcEECCEE
Confidence 111 22 22 1000 1111 1222222100 011100 00011233444444
Q ss_pred eecc----------eeecceEEee-eecEEEeeeEEeeeccCcEEEeeeeeEEEeeeeeeeccccCCCCCccccceEEEE
Q 011125 194 FDSG----------FRGGGIFVID-SARIRINNCFFLHFTTQGILVQRGHETFISSCFLGQRSTVGGDPGEKGFSGTAID 262 (493)
Q Consensus 194 ~D~n----------~~ggGI~v~n-Sq~v~I~NC~~~~fnTDGI~V~~s~~v~Isns~ig~~~t~ggd~~e~~f~gtGI~ 262 (493)
++.- ....||.+.. +.+..|.+|.+. -+-.||.++.+....|++++|. | +|-||+
T Consensus 145 I~G~~~~~~G~s~~~~dAGI~v~~~~d~~~I~nn~i~-~~~fGI~l~~a~~~~I~~N~I~----------e---~GNgI~ 210 (410)
T 2inu_A 145 LDGVGFTPGKNSYHNGKTGIEVASDNDSFHITGMGFV-YLEHALIVRGADALRVNDNMIA----------E---CGNCVE 210 (410)
T ss_dssp EECCCCSSSTTSCCCSCEEEEECSCEESCEEESCEEE-SCSEEEEETTEESCEEESCEEE----------S---SSEEEE
T ss_pred EECCEeecCCCCcccCceeEEEeccCCeEEEECCEEe-cccEEEEEccCCCcEEECCEEE----------e---cCCcee
Confidence 4443 1345777654 666778888664 3567899999999999999986 1 367788
Q ss_pred Ecc--CCceeeeEEEeeccee--EEEecc-eeEEEeeEEecccccccceeEEEec---cccccceecccccccceeeeeC
Q 011125 263 LAS--NDNAITDVTIFSAAIG--VLLRGQ-ANIVTRVHCYNKATAFGGIGILVKL---ADAALTRIDNCYLDYTGIVLED 334 (493)
Q Consensus 263 l~g--Nd~~ItD~~i~sa~~G--I~v~gq-~~ii~gvh~yN~~t~~GG~Gi~~~~---~~~~~~rI~ncyldy~~iv~~d 334 (493)
|-| .++.|+|..+..+.-| |.+++. .+.|++++++.. +=-|||+.- --+.+|++.+- -|--.+|.+
T Consensus 211 L~G~~~~~~I~~N~i~~~~dG~gIyl~ns~~~~I~~N~i~~~----~R~gIh~m~s~~~~i~~N~f~~~--~~Gi~~M~s 284 (410)
T 2inu_A 211 LTGAGQATIVSGNHMGAGPDGVTLLAENHEGLLVTGNNLFPR----GRSLIEFTGCNRCSVTSNRLQGF--YPGMLRLLN 284 (410)
T ss_dssp ECSCEESCEEESCEEECCTTSEEEEEESEESCEEESCEECSC----SSEEEEEESCBSCEEESCEEEES--SSCSEEEES
T ss_pred eccccccceEecceeeecCCCCEEEEEeCCCCEEECCCcccC----cceEEEEEccCCCEEECCEEecc--eeEEEEEEc
Confidence 887 6778888888888888 888866 667888877543 556777762 22666776654 333344443
Q ss_pred C-eeEEEEceeeee
Q 011125 335 P-VQVHVTNGFFLG 347 (493)
Q Consensus 335 ~-~~~~It~~~flg 347 (493)
- ....|++|.|++
T Consensus 285 ~~~~n~v~~N~f~~ 298 (410)
T 2inu_A 285 GCKENLITANHIRR 298 (410)
T ss_dssp SCBSCEEESCEEEE
T ss_pred CCCCCEEECCEEec
Confidence 2 477888888886
No 18
>1x0c_A Isopullulanase; glycoside hydrolase family 49, glycoprotein, hydro; HET: NAG; 1.70A {Aspergillus niger} PDB: 1wmr_A* 2z8g_A*
Probab=99.33 E-value=8.8e-12 Score=134.00 Aligned_cols=210 Identities=15% Similarity=0.178 Sum_probs=132.2
Q ss_pred EeeccccCCCCCCchhHHHHHHHHHhhhccCC--Ccc-------cccc----cccCCceEEEecCceEEe--eccEEeCC
Q 011125 59 FYPIGYGADPTGANESSDAILQALNDAFNVQS--GLE-------LLPG----VKDLGGVIIDFQGGNYKI--SKPIRFPP 123 (493)
Q Consensus 59 ~nV~dYGAdptG~tDsT~Aiq~AI~~A~~~~~--~~~-------l~pg----i~~~Gga~V~lPgGTYlI--s~pI~lp~ 123 (493)
||...|||++||++|.++||. +|.++|.... +.. +.|| +...|+++|++|+|+|++ +++|.|++
T Consensus 143 ~n~~~~~~~~dg~~~~~~~l~-ifa~p~~~~~~~P~~~~~~~~~~~~g~~~~~~~~ggg~v~vP~G~yl~g~~G~i~l~s 221 (549)
T 1x0c_A 143 FDDDLISLAPSGARQPENALL-IFASPFENSSTKPQPGSPNSIAPAPGRVLGLNTTSASTVVFNPGVYYFTGHDHMVLSS 221 (549)
T ss_dssp EGGGEEEETTTTEEEESEEEE-EEEECCCCTTTSCCTTCSSEECCCSEECCCTTTCCCSEEEECSEEEECCTTCCEEECT
T ss_pred ECCccccccccCcCCCcceEE-EEcCChhhccCCCCcCCCCceeeccccccccccCCCCEEEECCeEEecCCceEEEecC
Confidence 377789999999999999999 8887776522 111 1122 223589999999999997 57999998
Q ss_pred CCcc-eeEeCCe-EEecCCCCCCcceEEec-cCCCcccccccceeecc----ceeecccccCcCCccccce-eeeee---
Q 011125 124 GVGN-VVVQGGT-LRASDTFPSDRHLIELW-APNSQKLKRTDAIKIDR----NYVFNDVKDQTARTYYEDI-TFRDV--- 192 (493)
Q Consensus 124 g~Gn-i~i~~GT-LkAs~~Fpgd~~lI~~~-~~n~~~i~G~~~GtlDg----~w~~~c~~s~~~~~~~~~I-T~~~l--- 192 (493)
+. + +...+|. |+++ +.+. ..+.+.+.|. |++|| ||+..+. .. ...|+.. ....|
T Consensus 222 ~~-~~L~l~~GA~L~gs---------~~~~~~~~nv~ItG~--GtIDG~G~~ww~~~~~-~~--~~~~~~rp~~i~~~~~ 286 (549)
T 1x0c_A 222 SV-TWVYFAPGAYVKGA---------VEFLSTASEVKASGH--GVLSGEQYVWYADPDE-GY--QKASGANNNGLRMWRG 286 (549)
T ss_dssp TC-CEEEECTTEEEESC---------EEECCCSSEEEEESS--CEEECTTSCTTEEGGG-TT--EECGGGCSCCCCSEEE
T ss_pred CC-CeEecCCCCEEEEE---------EEEecCceeEEEEee--EEEECCCceecccCcc-cc--cccccCCCceEEEeec
Confidence 75 5 5566664 5643 2233 4555667776 89999 4432111 00 0012111 11122
Q ss_pred ---EeecceeecceEEeeee------------c--EEEeeeEEee---eccCcEEEeeeeeEEEeeeeeeeccccCCCCC
Q 011125 193 ---LFDSGFRGGGIFVIDSA------------R--IRINNCFFLH---FTTQGILVQRGHETFISSCFLGQRSTVGGDPG 252 (493)
Q Consensus 193 ---v~D~n~~ggGI~v~nSq------------~--v~I~NC~~~~---fnTDGI~V~~s~~v~Isns~ig~~~t~ggd~~ 252 (493)
....+....|++++||+ . +.|+|+.+.. .|||||++. +.+.|+||+|..-. |
T Consensus 287 ~~~~~c~nV~I~Giti~Nsp~w~i~i~~~~~~ni~V~I~n~~i~~~~~~NTDGidi~--~nV~I~n~~i~~gD----D-- 358 (549)
T 1x0c_A 287 TLGNSSQTFVLNGVTVSAPPFNSMDWSGNSLDLITCRVDDYKQVGAFYGQTDGLEMY--PGTILQDVFYHTDD----D-- 358 (549)
T ss_dssp ECCSSCEEEEEESCEEECCSSCSEEEECSCGGGEEEEEEEEEEECCCBTTCCCCBCC--TTCEEEEEEEEESS----C--
T ss_pred cccCCceEEEEECcEEECCCceeEEeeccCCCCCeEEEEeeEeEcCCCCCCCccccc--CCEEEEeeEEeCCC----C--
Confidence 33445566777777654 3 5555555542 279999999 89999999997322 2
Q ss_pred ccccceEEEEEccCCceeeeEEEeecc-ee-EEEecceeEEEeeEEecc
Q 011125 253 EKGFSGTAIDLASNDNAITDVTIFSAA-IG-VLLRGQANIVTRVHCYNK 299 (493)
Q Consensus 253 e~~f~gtGI~l~gNd~~ItD~~i~sa~-~G-I~v~gq~~ii~gvh~yN~ 299 (493)
+|.+.+.+=.|.+|.+.++. .| |.++.....++++++.|+
T Consensus 359 -------cIaIks~NI~I~n~~~~~~~g~~~IsiGs~~~~V~NV~v~n~ 400 (549)
T 1x0c_A 359 -------GLKMYYSNVTARNIVMWKESVAPVVEFGWTPRNTENVLFDNV 400 (549)
T ss_dssp -------CEECCSSSEEEEEEEEEECSSSCSEECCBSCCCEEEEEEEEE
T ss_pred -------EEEECCCCEEEEeeEEEcCCCCceEEECCCCCcEEEEEEEee
Confidence 25555544589999998654 45 777644344555655555
No 19
>1k5c_A Endopolygalacturonase; beta helical structure, glycoside hydrolase, silver-LEAF IND substance, hydrolase; HET: NAG; 0.96A {Chondrostereum purpureum} SCOP: b.80.1.3 PDB: 1kcc_A* 1kcd_A*
Probab=99.30 E-value=3.5e-11 Score=121.86 Aligned_cols=216 Identities=13% Similarity=0.089 Sum_probs=134.3
Q ss_pred HHHHHHHHHhhhccCCCcccccccccCCceEEEecCceEEeeccEEeCCCCcceeEeCCeEEecC-CCCCCcceEEeccC
Q 011125 75 SDAILQALNDAFNVQSGLELLPGVKDLGGVIIDFQGGNYKISKPIRFPPGVGNVVVQGGTLRASD-TFPSDRHLIELWAP 153 (493)
Q Consensus 75 T~Aiq~AI~~A~~~~~~~~l~pgi~~~Gga~V~lPgGTYlIs~pI~lp~g~Gni~i~~GTLkAs~-~Fpgd~~lI~~~~~ 153 (493)
++|||+ + +||+.. |+++|++|+|+|+. |.|..+ -.+..+|+++++. .+.+ .||.+..
T Consensus 8 ~~aiq~-i-~aC~~~------------gg~~v~vP~G~~l~---l~l~~~--~~l~~~g~~~~~~~~w~~--~~i~~~~- 65 (335)
T 1k5c_A 8 VDDAKD-I-AGCSAV------------TLNGFTVPAGNTLV---LNPDKG--ATVTMAGDITFAKTTLDG--PLFTIDG- 65 (335)
T ss_dssp TTGGGG-C-TTCSEE------------EECCEEECTTCCEE---ECCCTT--CEEEECSCEEECCCCSCS--CSEEEEE-
T ss_pred HHHhHH-H-HhcccC------------CCCEEEECCCEEEE---EEeCCC--eEEEEeccEecccccccC--cEEEEEc-
Confidence 679999 5 556322 56799999999973 444443 2347889998753 3433 4888764
Q ss_pred CCcccccccceeecc----ceeecccccCcCCccccceeeeeeEeecceeecceEEeeeec--EEEeeeEE---------
Q 011125 154 NSQKLKRTDAIKIDR----NYVFNDVKDQTARTYYEDITFRDVLFDSGFRGGGIFVIDSAR--IRINNCFF--------- 218 (493)
Q Consensus 154 n~~~i~G~~~GtlDg----~w~~~c~~s~~~~~~~~~IT~~~lv~D~n~~ggGI~v~nSq~--v~I~NC~~--------- 218 (493)
+...+.|. .|+||| ||...+.. . ......+..|.... ....||+++||++ +.+.+|..
T Consensus 66 ~ni~I~G~-~G~idG~G~~ww~~~~~~----~-~~~rP~~i~~~~~~-v~i~giti~nsp~~~i~i~~~~n~v~i~~v~I 138 (335)
T 1k5c_A 66 TGINFVGA-DHIFDGNGALYWDGKGTN----N-GTHKPHPFLKIKGS-GTYKKFEVLNSPAQAISVGPTDAHLTLDGITV 138 (335)
T ss_dssp EEEEEECT-TCEEECCGGGTCCSCTTT----S-SSCCCCCSEEEEEE-EEEESCEEESCSSCCEEEEEEEEEEEEESCEE
T ss_pred cCEEEEeC-ccEEcCChhHhhhccccc----C-CCCCCeEEEEeceE-EEEEEEEEECCCcceEEEEccCCeEEEEEEEE
Confidence 55678873 389999 55422211 0 11111333333333 6667777777655 55555554
Q ss_pred ee---------eccCcEEEeeeeeEEEeeeeeeeccccCCCCCccccceEEEEEccCCceeeeEEEeecceeEEEecc--
Q 011125 219 LH---------FTTQGILVQRGHETFISSCFLGQRSTVGGDPGEKGFSGTAIDLASNDNAITDVTIFSAAIGVLLRGQ-- 287 (493)
Q Consensus 219 ~~---------fnTDGI~V~~s~~v~Isns~ig~~~t~ggd~~e~~f~gtGI~l~gNd~~ItD~~i~sa~~GI~v~gq-- 287 (493)
.. .|||||++ .|+.+.|+||+|.. ||. ...|+- |.+=.|.|+.+.++ +||.+...
T Consensus 139 ~~~~~d~~~~~~NtDGidi-~s~nV~I~n~~i~~-----gDD------cIaiks-g~nI~i~n~~~~~g-hGisIGS~g~ 204 (335)
T 1k5c_A 139 DDFAGDTKNLGHNTDGFDV-SANNVTIQNCIVKN-----QDD------CIAIND-GNNIRFENNQCSGG-HGISIGSIAT 204 (335)
T ss_dssp ECGGGGGGGCCCSCCSEEE-ECSSEEEESCEEES-----SSC------SEEEEE-EEEEEEESCEEESS-CCEEEEEECT
T ss_pred ECCCCcccccCCCCCeEcc-cCCeEEEEeeEEEc-----CCC------EEEeeC-CeeEEEEEEEEECC-ccCeEeeccC
Confidence 43 38999999 99999999999962 332 333433 23347888887775 68988633
Q ss_pred eeEEEeeEEecccccccceeEEEecccccc-ceecccccccceeeeeCC
Q 011125 288 ANIVTRVHCYNKATAFGGIGILVKLADAAL-TRIDNCYLDYTGIVLEDP 335 (493)
Q Consensus 288 ~~ii~gvh~yN~~t~~GG~Gi~~~~~~~~~-~rI~ncyldy~~iv~~d~ 335 (493)
...++++++.|+.-.---.|+++|-..-.. ..++|= -|..|.+++.
T Consensus 205 ~~~v~nV~v~n~~~~~t~~girIKt~~g~~~G~v~nI--~f~ni~~~~v 251 (335)
T 1k5c_A 205 GKHVSNVVIKGNTVTRSMYGVRIKAQRTATSASVSGV--TYDANTISGI 251 (335)
T ss_dssp TCEEEEEEEESCEEEEEEEEEEEEEETTCCSCEEEEE--EEESCEEEEE
T ss_pred CCCEEEEEEEeeEEECCCceEEEEEeCCCCcceEeee--EEEEEEEEcc
Confidence 356888888888655555678888321122 445555 5666666654
No 20
>1ogo_X Dextranase; hydrolase, dextran degradation, glycosidase; HET: BGC GLC; 1.65A {Penicillium minioluteum} SCOP: b.133.1.1 b.80.1.10 PDB: 1ogm_X*
Probab=99.25 E-value=3e-10 Score=122.93 Aligned_cols=168 Identities=14% Similarity=0.125 Sum_probs=102.7
Q ss_pred CCceEEEecCceEEee------------ccEEeCCCCcc-eeEeCCe-EEecCCCCCCcceEEeccCCCcccccccceee
Q 011125 101 LGGVIIDFQGGNYKIS------------KPIRFPPGVGN-VVVQGGT-LRASDTFPSDRHLIELWAPNSQKLKRTDAIKI 166 (493)
Q Consensus 101 ~Gga~V~lPgGTYlIs------------~pI~lp~g~Gn-i~i~~GT-LkAs~~Fpgd~~lI~~~~~n~~~i~G~~~Gtl 166 (493)
.||++||+|+|+|++. +||.|++.. + +...+|. |+ .+|.+.....+.|.|. |+|
T Consensus 229 ~ggg~v~vP~G~yl~~~~~~~gpc~~g~G~i~lkSnv-t~L~L~~GA~l~---------g~i~~~~~~nv~ItG~--GtI 296 (574)
T 1ogo_X 229 GAKSILYFPPGVYWMNQDQSGNSGKLGSNHIRLNSNT-YWVYLAPGAYVK---------GAIEYFTKQNFYATGH--GIL 296 (574)
T ss_dssp CSSSEEEECSEEEEECBCTTCCBSCSSSCCEECCTTC-CEEEECTTEEEE---------SCEEECCSSCEEEESS--CEE
T ss_pred CCCCEEEECCcEEEEeccccCCcccccceEEEecCCC-ceEEecCCcEEE---------ccEEEeCceeEEEEeC--EEE
Confidence 5889999999999981 344444432 2 3233332 22 2466777777888887 899
Q ss_pred cc----ceeecccccCcCCccccce-eee------eeEeecceeecceEEeeeec----------E--EEeeeEEee---
Q 011125 167 DR----NYVFNDVKDQTARTYYEDI-TFR------DVLFDSGFRGGGIFVIDSAR----------I--RINNCFFLH--- 220 (493)
Q Consensus 167 Dg----~w~~~c~~s~~~~~~~~~I-T~~------~lv~D~n~~ggGI~v~nSq~----------v--~I~NC~~~~--- 220 (493)
|| ||. .+... ...|... +.. .++...+....|++++||++ + .|+||....
T Consensus 297 DG~G~~ww~-~~~~~---~~~~~~rp~~i~~~~~~~~~~c~NV~I~Giti~NSp~w~i~~~~c~nV~~~I~nv~i~~~~~ 372 (574)
T 1ogo_X 297 SGENYVYQA-NAGDN---YIAVKSDSTSLRMWWHNNLGGGQTWYCVGPTINAPPFNTMDFNGNSGISSQISDYKQVGAFF 372 (574)
T ss_dssp ECTTSCTTC-BTTTT---TBSCCCTTTBCCSEEECSCCSSEEEEEESCEEECCSSCSEEECSSSCEEEEEEEEEEECCCS
T ss_pred eCCCccccc-ccccc---cccccCCcceEEEEeccccCCceeEEEECeEEECCCCcEEeecCCCChhhEEEeeEeeCCCC
Confidence 99 443 22111 0112110 111 22244566677777777654 4 556665442
Q ss_pred eccCcEEEeeeeeEEEeeeeeeeccccCCCCCccccceEEEEEccCCceeeeEEEeecc-ee-EEEecceeEEEeeEEec
Q 011125 221 FTTQGILVQRGHETFISSCFLGQRSTVGGDPGEKGFSGTAIDLASNDNAITDVTIFSAA-IG-VLLRGQANIVTRVHCYN 298 (493)
Q Consensus 221 fnTDGI~V~~s~~v~Isns~ig~~~t~ggd~~e~~f~gtGI~l~gNd~~ItD~~i~sa~-~G-I~v~gq~~ii~gvh~yN 298 (493)
.+||||++. +.+.|+||+|..-. | . |.+.+.+=.|.+|.+.++. .| |.++.....++++++.|
T Consensus 373 ~nTDGIDi~--~NV~I~nc~I~~gD----D-------c--IaIks~NI~I~nc~i~~g~g~g~IsIGS~~g~V~NV~v~N 437 (574)
T 1ogo_X 373 FQTDGPEIY--PNSVVHDVFWHVND----D-------A--IKIYYSGASVSRATIWKCHNDPIIQMGWTSRDISGVTIDT 437 (574)
T ss_dssp TTCCCCBCC--TTCEEEEEEEEESS----C-------S--EECCSTTCEEEEEEEEECSSSCSEECCSSCCCEEEEEEEE
T ss_pred CCCccCccc--CCEEEEeeEEECCC----C-------E--EEECCccEEEEeEEEECCCCCceEEEcCCCCcEEEEEEEe
Confidence 269999998 89999999997322 2 2 5555555599999998765 45 77764434466666666
Q ss_pred c
Q 011125 299 K 299 (493)
Q Consensus 299 ~ 299 (493)
+
T Consensus 438 ~ 438 (574)
T 1ogo_X 438 L 438 (574)
T ss_dssp E
T ss_pred E
Confidence 5
No 21
>3eqn_A Glucan 1,3-beta-glucosidase; tandem beta-helix domains, glycosidase, hydrolase; HET: NAG BMA; 1.70A {Phanerochaete chrysosporium} PDB: 3eqo_A*
Probab=99.12 E-value=8.2e-10 Score=122.13 Aligned_cols=185 Identities=18% Similarity=0.257 Sum_probs=106.1
Q ss_pred CCeEEeeccccCCCCCCchhHHHHHHHHHhhhccCCCcccccccccCCceEEEecCceEEeeccEEeCCCCcceeE-eCC
Q 011125 55 NGRVFYPIGYGADPTGANESSDAILQALNDAFNVQSGLELLPGVKDLGGVIIDFQGGNYKISKPIRFPPGVGNVVV-QGG 133 (493)
Q Consensus 55 ~~rv~nV~dYGAdptG~tDsT~Aiq~AI~~A~~~~~~~~l~pgi~~~Gga~V~lPgGTYlIs~pI~lp~g~Gni~i-~~G 133 (493)
..+++||+||||++||++|||+|||+||++|. ++.+||||+|+|+|+++|++|++. .++. .-.
T Consensus 397 ~~~~vnVkd~GA~GDG~tDDT~Ai~~al~aa~---------------~g~~v~~P~G~Y~vt~Ti~ip~~~-~ivG~~~~ 460 (758)
T 3eqn_A 397 PSDFVSVRSQGAKGDGHTDDTQAIKNVFAKYA---------------GCKIIFFDAGTYIVTDTIQIPAGT-QIVGEVWS 460 (758)
T ss_dssp GGGEEETTTTTCCCEEEEECHHHHHHHHHHHT---------------TTSEEECCSEEEEESSCEEECTTC-EEECCSSE
T ss_pred ccceEEeeeccccCCCCchhHHHHHHHHHHhc---------------CCCEEEECCCEeEECCeEEcCCCC-EEEecccc
Confidence 56899999999999999999999999999652 456999999999999999999874 3421 124
Q ss_pred eEEecC-CCCCC---cceEEeccCCC---ccccc---ccceeeccceeecccccCcCCccccceeeeeeEeecceeecce
Q 011125 134 TLRASD-TFPSD---RHLIELWAPNS---QKLKR---TDAIKIDRNYVFNDVKDQTARTYYEDITFRDVLFDSGFRGGGI 203 (493)
Q Consensus 134 TLkAs~-~Fpgd---~~lI~~~~~n~---~~i~G---~~~GtlDg~w~~~c~~s~~~~~~~~~IT~~~lv~D~n~~ggGI 203 (493)
+|.+.- .|... ..+++...+.. ..+.+ ++.|..-+..-..+..... ... .-..-|.|.-+|++|-
T Consensus 461 ~I~~~G~~F~d~~~P~pvv~VG~~gd~G~veisdl~~~t~g~~~gail~ewn~~~~-~~~----~~~~~mwDvh~RiGG~ 535 (758)
T 3eqn_A 461 VIMGTGSKFTDYNNPQPVIQVGAPGSSGVVEITDMIFTTRGPAAGAIIVEWNVHDP-SGQ----QAAAGAWDTHLIIGGT 535 (758)
T ss_dssp EEEECSGGGCCTTSCEEEEEESCTTCBSCEEEESCEEEECSCCTTEEEEEECCBCC-TTC----TTCEEEESCBEEESSS
T ss_pred eEecCCccccCCCCCeeeEEeCCCCCCCeEEEEeEEEEecCCCCCcEEEEEcCCCC-CCC----CCCeeEEEEEEEeccc
Confidence 677653 34322 24666643321 11111 0001111100000000000 000 0123456777776653
Q ss_pred EEeeeecEEEeee----------EEeeeccCcEEEeeeeeEEEeeeee--eeccccCCCC-CccccceEEEEEccC
Q 011125 204 FVIDSARIRINNC----------FFLHFTTQGILVQRGHETFISSCFL--GQRSTVGGDP-GEKGFSGTAIDLASN 266 (493)
Q Consensus 204 ~v~nSq~v~I~NC----------~~~~fnTDGI~V~~s~~v~Isns~i--g~~~t~ggd~-~e~~f~gtGI~l~gN 266 (493)
.- ++ +....| .-. --.+||..+...|++|+++ +.|...+... ....+.+.|+-+++.
T Consensus 536 ~g--t~-l~~~~C~~~~~~~~~C~aa---~~~lhvt~~ss~y~en~W~W~ADH~~d~~~~~qi~~~~~rGllVes~ 605 (758)
T 3eqn_A 536 AQ--SG-LQVGQCPTSGAGGNNCFAD---FLGLHLTSGSSAYLEGMWVWLADHDLDSGGSQQISLWSNGGIMSESQ 605 (758)
T ss_dssp TT--SS-CSTTTCCTTCTTGGGGEEE---EEEEEECTTCCEEEESCEEEECSBCSSSSTTCBCCCEEEEEEEECCC
T ss_pred cC--cc-cccccCCCCCCCCccchhh---eeEEEEecCCCeEEEeeEEEeccCCCCCccccceEEecCceEEEeCC
Confidence 21 10 111223 111 1257887777789999777 7776553321 235678888888875
No 22
>1ru4_A Pectate lyase, PEL9A; parallel beta-helix; 1.60A {Erwinia chrysanthemi} SCOP: b.80.1.9
Probab=98.35 E-value=1e-05 Score=83.99 Aligned_cols=163 Identities=15% Similarity=0.137 Sum_probs=97.2
Q ss_pred ceeeeeeEeecceeecceEEeeeecEEEeeeEEeeeccCcEEEeeee-eEEEeeeeeeeccccCCCCCccccceEEEEEc
Q 011125 186 DITFRDVLFDSGFRGGGIFVIDSARIRINNCFFLHFTTQGILVQRGH-ETFISSCFLGQRSTVGGDPGEKGFSGTAIDLA 264 (493)
Q Consensus 186 ~IT~~~lv~D~n~~ggGI~v~nSq~v~I~NC~~~~fnTDGI~V~~s~-~v~Isns~ig~~~t~ggd~~e~~f~gtGI~l~ 264 (493)
++++++|.+.... ..||.+. +.+..|.||.+.+....||.++.+. ...|++|.+..-... ...++ +-+|.++++.
T Consensus 116 ~~~i~gl~I~n~g-~~GI~v~-gs~~~i~n~~i~~n~~~GI~l~~~~s~n~I~nn~i~~N~d~-~~~g~-~~dG~~~~~~ 191 (400)
T 1ru4_A 116 YWYFKGVEVTRAG-YQGAYVI-GSHNTFENTAFHHNRNTGLEINNGGSYNTVINSDAYRNYDP-KKNGS-MADGFGPKQK 191 (400)
T ss_dssp CEEEESEEEESCS-SCSEEEC-SSSCEEESCEEESCSSCSEEECTTCCSCEEESCEEECCCCT-TTTTS-SCCSEEECTT
T ss_pred eEEEEeEEEEeCC-CCcEEEe-CCCcEEEeEEEECCCceeEEEEcccCCeEEEceEEEcccCc-cccCc-ccceEEEEec
Confidence 4455665553322 1277655 3567899999998888899998754 788889998632211 11112 2235555544
Q ss_pred -cCCceeeeEEEee-cceeEEEecc--eeEEEeeEEeccccccc--------ceeEEEecc-ccccceecccccccc---
Q 011125 265 -SNDNAITDVTIFS-AAIGVLLRGQ--ANIVTRVHCYNKATAFG--------GIGILVKLA-DAALTRIDNCYLDYT--- 328 (493)
Q Consensus 265 -gNd~~ItD~~i~s-a~~GI~v~gq--~~ii~gvh~yN~~t~~G--------G~Gi~~~~~-~~~~~rI~ncyldy~--- 328 (493)
+.++.|.++.+.. ...|+.+.+. ..+|+++..|+...... |.|+.+--. ......|.||- .|.
T Consensus 192 ~g~Gn~~~~~~~~~N~ddGidl~~~~~~v~i~nn~a~~Ng~~~~~~n~~~gngnGf~lgg~~~~~~~~v~nn~-a~~N~~ 270 (400)
T 1ru4_A 192 QGPGNRFVGCRAWENSDDGFDLFDSPQKVVIENSWAFRNGINYWNDSAFAGNGNGFKLGGNQAVGNHRITRSV-AFGNVS 270 (400)
T ss_dssp CCSCCEEESCEEESCSSCSEECTTCCSCCEEESCEEESTTCCCSCCTTCCCCCCSEECCCTTCCCCCEEESCE-EESCSS
T ss_pred ccCCeEEECCEEeecCCCcEEEEecCCCEEEEeEEEECCccccccccccccCCCCEEEeccCCcCCEEEEeeE-EECCcC
Confidence 4567888887763 4578888644 34788988888754332 445554210 12346677773 333
Q ss_pred -eeeeeCC-eeEEEEceeeeecc-eeEE
Q 011125 329 -GIVLEDP-VQVHVTNGFFLGDA-NIVL 353 (493)
Q Consensus 329 -~iv~~d~-~~~~It~~~flg~a-~v~l 353 (493)
|+-.+.. -.+.|.+|.+.+.+ ++.|
T Consensus 271 ~G~~~n~~~~~~~i~nNt~~~N~~~~~~ 298 (400)
T 1ru4_A 271 KGFDQNNNAGGVTVINNTSYKNGINYGF 298 (400)
T ss_dssp EEEECTTCSSCCEEESCEEESSSEEEEE
T ss_pred cCEeecCCCCCEEEECeEEECCccceEE
Confidence 6666443 34777777666653 4444
No 23
>1dbg_A Chondroitinase B; beta helix, polysaccharide lyase, dematan sulfate; HET: MAN RAM GCU MXY G4D BGC; 1.70A {Pedobacter heparinus} SCOP: b.80.1.4 PDB: 1dbo_A* 1ofl_A* 1ofm_A*
Probab=98.24 E-value=6.4e-05 Score=80.40 Aligned_cols=32 Identities=16% Similarity=0.362 Sum_probs=23.6
Q ss_pred HHHHHHHHHhhhccCCCcccccccccCCceEEEecCceEEeeccEEeC
Q 011125 75 SDAILQALNDAFNVQSGLELLPGVKDLGGVIIDFQGGNYKISKPIRFP 122 (493)
Q Consensus 75 T~Aiq~AI~~A~~~~~~~~l~pgi~~~Gga~V~lPgGTYlIs~pI~lp 122 (493)
.+.||+|++.|- -|-+|+|++|+|.- ++|.+.
T Consensus 31 ~~~Lq~Ai~~A~---------------pGDtI~L~~GtY~~-~~i~i~ 62 (506)
T 1dbg_A 31 NETLYQVVKEVK---------------PGGLVQIADGTYKD-VQLIVS 62 (506)
T ss_dssp HHHHHHHHHHCC---------------TTCEEEECSEEEET-CEEEEC
T ss_pred HHHHHHHHHhCC---------------CCCEEEECCCEEec-ceEEEe
Confidence 467999999762 24699999999973 356664
No 24
>2pyg_A Poly(beta-D-mannuronate) C5 epimerase 4; beta-helix, isomerase; 2.10A {Azotobacter vinelandii} PDB: 2pyh_A*
Probab=98.19 E-value=1.4e-05 Score=80.08 Aligned_cols=160 Identities=13% Similarity=0.113 Sum_probs=110.2
Q ss_pred eecceEEeeeecEEEeeeEEeeeccCcEEEee-eeeEEEeeeeeeeccccCCCCCccccceEEEE-------EccCCcee
Q 011125 199 RGGGIFVIDSARIRINNCFFLHFTTQGILVQR-GHETFISSCFLGQRSTVGGDPGEKGFSGTAID-------LASNDNAI 270 (493)
Q Consensus 199 ~ggGI~v~nSq~v~I~NC~~~~fnTDGI~V~~-s~~v~Isns~ig~~~t~ggd~~e~~f~gtGI~-------l~gNd~~I 270 (493)
...||.+..|....|.+|...+.++|||++.. |+.+.|+++.+..-. . +..+. +.+.+..|
T Consensus 171 ~~dGI~~~~s~~~~i~~N~~~~~~~~GI~~~~~s~~v~I~nN~i~~~~-~----------g~~~~~~g~~~~~~s~nv~i 239 (377)
T 2pyg_A 171 GLDGFVADYLVDSVFENNVAYANDRHGFNVVTSTHDFVMTNNVAYGNG-S----------SGLVVQRGLEDLALPSNILI 239 (377)
T ss_dssp SSCSEEEESEEEEEEESCEEESCSSCSEEEETTCEEEEEESCEEESCS-S----------CSEEEECCSSCCCCCEEEEE
T ss_pred CCCceeEeccCCcEEECcEEEccccCcEEEEeccCCeEEECCEEECcc-C----------ceEEEeccccCCCCCccEEE
Confidence 45788888899999999988888999999888 999999999997321 1 11111 22223466
Q ss_pred eeEEEee-cceeEEEecc-eeEEEeeEEecccccccceeEEEeccc---cccceeccccc--ccceeeee----------
Q 011125 271 TDVTIFS-AAIGVLLRGQ-ANIVTRVHCYNKATAFGGIGILVKLAD---AALTRIDNCYL--DYTGIVLE---------- 333 (493)
Q Consensus 271 tD~~i~s-a~~GI~v~gq-~~ii~gvh~yN~~t~~GG~Gi~~~~~~---~~~~rI~ncyl--dy~~iv~~---------- 333 (493)
.+..+++ ...|+.+..- ..+|+++++++. .+.||+++-.. +..++|.+|.. .|..+..+
T Consensus 240 ~~N~~~~n~~~Gi~~~~~~~v~i~~N~i~~~----~~~GI~i~g~~~~~i~~N~i~~n~~~~~~~~v~~~~~~~~~~~~~ 315 (377)
T 2pyg_A 240 DGGAYYDNAREGVLLKMTSDITLQNADIHGN----GSSGVRVYGAQDVQILDNQIHDNAQAAAVPEVLLQSFDDTAGASG 315 (377)
T ss_dssp ESCEEESCSSCSEEEEEEEEEEEESCEEESC----SSCSEEEEEEEEEEEESCEEESCCSSSSCCSEEEECEEETTSSSC
T ss_pred ECCEEEcCccCceEeccccCeEEECCEEECC----CCceEEEecCCCcEEECcEEECCcccccccceEEEEecCCCccce
Confidence 6666664 5788888754 557899999877 46788877322 67778887743 23333221
Q ss_pred ---CCeeEEEEceeeee--cceeEEEeecceeeeeEEEeeeccCC
Q 011125 334 ---DPVQVHVTNGFFLG--DANIVLKSIKGRISGLTIVENMFNGS 373 (493)
Q Consensus 334 ---d~~~~~It~~~flg--~a~v~l~~~~~~~~g~~I~~N~~~g~ 373 (493)
++.++.|++|.|.| .+...+.......+++.|.+|.|.|.
T Consensus 316 ~~~~~~~~~i~~N~i~g~~~~~~~i~~~~~~~~~~~i~~n~i~~~ 360 (377)
T 2pyg_A 316 TYYTTLNTRIEGNTISGSANSTYGIQERNDGTDYSSLIDNDIAGV 360 (377)
T ss_dssp EEECCBCCEEESCEEECCSSCCEEEEECSSSCBCCEEESCEEESS
T ss_pred eeeeccCeEEECCEEECcCCCccceEEccCCCccEEEECcEEeCC
Confidence 24688899999998 33334444323456889999999988
No 25
>1gq8_A Pectinesterase; hydrolase, carboxylic ester hydrolase; 1.75A {Daucus carota} SCOP: b.80.1.5
Probab=97.80 E-value=0.00062 Score=68.86 Aligned_cols=196 Identities=15% Similarity=0.218 Sum_probs=107.4
Q ss_pred HHHHHHHhhhccCCCcccccccccCCceEEEecCceEEeeccEEeCCCCccee-EeCCeEEecCCCCCCcceEEeccCCC
Q 011125 77 AILQALNDAFNVQSGLELLPGVKDLGGVIIDFQGGNYKISKPIRFPPGVGNVV-VQGGTLRASDTFPSDRHLIELWAPNS 155 (493)
Q Consensus 77 Aiq~AI~~A~~~~~~~~l~pgi~~~Gga~V~lPgGTYlIs~pI~lp~g~Gni~-i~~GTLkAs~~Fpgd~~lI~~~~~n~ 155 (493)
-||+||++|-.... ...+|+|.+|+|+ ..|.+|..+.+|. +.+|. +...|+......
T Consensus 21 TIq~AI~aap~~~~-----------~~~~I~I~~G~Y~--E~V~I~~~k~~Itl~G~g~---------~~tiI~~~~~~~ 78 (319)
T 1gq8_A 21 TVSEAVAAAPEDSK-----------TRYVIRIKAGVYR--ENVDVPKKKKNIMFLGDGR---------TSTIITASKNVQ 78 (319)
T ss_dssp SHHHHHHHSCSSCS-----------SCEEEEECSEEEE--CCEEECTTCCSEEEEESCT---------TTEEEEECCCTT
T ss_pred CHHHHHHhccccCC-----------ceEEEEEcCCeEe--eeeeccCCCccEEEEEcCC---------CccEEEeccccc
Confidence 39999998643221 2369999999997 5799985555665 33331 222444322110
Q ss_pred cccccccceeeccceeecccccCcCCccccceeeeeeEeecce-----eecceEEeeeecEEEeeeEEeeeccCcEEEee
Q 011125 156 QKLKRTDAIKIDRNYVFNDVKDQTARTYYEDITFRDVLFDSGF-----RGGGIFVIDSARIRINNCFFLHFTTQGILVQR 230 (493)
Q Consensus 156 ~~i~G~~~GtlDg~w~~~c~~s~~~~~~~~~IT~~~lv~D~n~-----~ggGI~v~nSq~v~I~NC~~~~fnTDGI~V~~ 230 (493)
+|. ++..... . .....++++++|.+-+.. ..-+|.+ .+.+..|.||.|.++ -|++.++.
T Consensus 79 ---~g~--~t~~sat----v-----~v~a~~f~~~nlt~~Nt~g~~~~qAvAl~v-~~d~~~f~~c~f~g~-QDTLy~~~ 142 (319)
T 1gq8_A 79 ---DGS--TTFNSAT----V-----AAVGAGFLARDITFQNTAGAAKHQAVALRV-GSDLSAFYRCDILAY-QDSLYVHS 142 (319)
T ss_dssp ---TTC--CTGGGCS----E-----EECSTTCEEEEEEEEECCCGGGCCCCSEEE-CCTTEEEEEEEEECS-TTCEEECS
T ss_pred ---CCC--CccceEE----E-----EEECCCEEEEEeEeEccCCCcCCceEEEEe-cCCcEEEEEeEECcc-ceeeeecC
Confidence 000 0110000 0 011233445555554432 3345544 577799999999987 56799988
Q ss_pred eeeEEEeeeeeeeccccCCCCCccccceEEEEEccC-CceeeeEEEeecc-----ee-EEEec-----c--eeEEEeeEE
Q 011125 231 GHETFISSCFLGQRSTVGGDPGEKGFSGTAIDLASN-DNAITDVTIFSAA-----IG-VLLRG-----Q--ANIVTRVHC 296 (493)
Q Consensus 231 s~~v~Isns~ig~~~t~ggd~~e~~f~gtGI~l~gN-d~~ItD~~i~sa~-----~G-I~v~g-----q--~~ii~gvh~ 296 (493)
++. ++++|+|.... |- |. |+ .....+|.|.+-. .| |...+ + +.+|.+|++
T Consensus 143 ~r~-~~~~c~I~G~v----DF---------If--G~~~a~f~~c~i~~~~~~~~~~~~itA~~r~~~~~~~G~vf~~c~i 206 (319)
T 1gq8_A 143 NRQ-FFINCFIAGTV----DF---------IF--GNAAVVLQDCDIHARRPGSGQKNMVTAQGRTDPNQNTGIVIQKSRI 206 (319)
T ss_dssp SEE-EEESCEEEESS----SC---------EE--ESCEEEEESCEEEECCCSTTCCEEEEEECCCSTTCCCEEEEESCEE
T ss_pred ccE-EEEecEEEeee----eE---------Ee--cCCcEEEEeeEEEEecCCCCCceEEEeCCCCCCCCCceEEEECCEE
Confidence 764 99999997432 11 11 22 1244455555421 22 33333 2 557888888
Q ss_pred ecccccc---cceeEEEeccc--cccceecccccc
Q 011125 297 YNKATAF---GGIGILVKLAD--AALTRIDNCYLD 326 (493)
Q Consensus 297 yN~~t~~---GG~Gi~~~~~~--~~~~rI~ncyld 326 (493)
....... +..-.||-||= .+.+=+.+|||+
T Consensus 207 ~~~~~~~~~~~~~~~yLGRpW~~~sr~v~~~t~~~ 241 (319)
T 1gq8_A 207 GATSDLQPVQSSFPTYLGRPWKEYSRTVVMQSSIT 241 (319)
T ss_dssp EECTTTGGGGGGSCEEEECCSSTTCEEEEESCEEC
T ss_pred ecCCCccccccceeEEecccCCCcceEEEEeccCC
Confidence 6432111 11246777654 567777888876
No 26
>1xg2_A Pectinesterase 1; protein-protein complex, beta helix,four helix bundle, hydrolase/hydrolase inhibitor complex; 1.90A {Solanum lycopersicum}
Probab=97.73 E-value=0.00084 Score=67.84 Aligned_cols=196 Identities=12% Similarity=0.132 Sum_probs=107.1
Q ss_pred HHHHHHHhhhccCCCcccccccccCCceEEEecCceEEeeccEEeCCCCccee-EeCCeEEecCCCCCCcceEEeccCCC
Q 011125 77 AILQALNDAFNVQSGLELLPGVKDLGGVIIDFQGGNYKISKPIRFPPGVGNVV-VQGGTLRASDTFPSDRHLIELWAPNS 155 (493)
Q Consensus 77 Aiq~AI~~A~~~~~~~~l~pgi~~~Gga~V~lPgGTYlIs~pI~lp~g~Gni~-i~~GTLkAs~~Fpgd~~lI~~~~~n~ 155 (493)
-||+||++|-.... ...+|+|.+|+|+ ..|.+|..+.+|. +.+|. +...|+......
T Consensus 17 TIq~AI~aap~~~~-----------~~~~I~I~~G~Y~--E~V~I~~~k~~Itl~G~g~---------~~tiI~~~~~~~ 74 (317)
T 1xg2_A 17 TLAEAVAAAPDKSK-----------TRYVIYVKRGTYK--ENVEVASNKMNLMIVGDGM---------YATTITGSLNVV 74 (317)
T ss_dssp SHHHHHHHSCSSCS-----------SCEEEEECSEEEE--CCEEECTTSCSEEEEESCT---------TTEEEEECCCTT
T ss_pred cHHHHHhhcccCCC-----------ceEEEEEcCCEEe--eeeecCCCCCcEEEEEcCC---------CCcEEEeccccc
Confidence 39999998643221 2369999999997 5799985555675 34431 122444322110
Q ss_pred cccccccceeeccceeecccccCcCCccccceeeeeeEeecc-----eeecceEEeeeecEEEeeeEEeeeccCcEEEee
Q 011125 156 QKLKRTDAIKIDRNYVFNDVKDQTARTYYEDITFRDVLFDSG-----FRGGGIFVIDSARIRINNCFFLHFTTQGILVQR 230 (493)
Q Consensus 156 ~~i~G~~~GtlDg~w~~~c~~s~~~~~~~~~IT~~~lv~D~n-----~~ggGI~v~nSq~v~I~NC~~~~fnTDGI~V~~ 230 (493)
+|. ++..... . .....++++++|.+-+. ...-+|++ .+.+..|.||.+.++ -|++.++.
T Consensus 75 ---~g~--~t~~sat----v-----~v~a~~f~~~~lt~~Nt~g~~~~qAvAl~v-~~d~~~f~~c~f~g~-QDTLy~~~ 138 (317)
T 1xg2_A 75 ---DGS--TTFRSAT----L-----AAVGQGFILQDICIQNTAGPAKDQAVALRV-GADMSVINRCRIDAY-QDTLYAHS 138 (317)
T ss_dssp ---TTC--CSGGGCS----E-----EECSTTCEEESCEEEECCCGGGCCCCSEEE-CCTTEEEESCEEECS-TTCEEECS
T ss_pred ---CCC--cccceeE----E-----EEECCCEEEEEeEEecccCCccCceEEEEE-eCCcEEEEEeEeCcc-ccceeecC
Confidence 000 0110000 0 01122334444444433 23345544 577799999999987 56799988
Q ss_pred eeeEEEeeeeeeeccccCCCCCccccceEEEEEccC-CceeeeEEEeecc-----ee-EEEec-----c--eeEEEeeEE
Q 011125 231 GHETFISSCFLGQRSTVGGDPGEKGFSGTAIDLASN-DNAITDVTIFSAA-----IG-VLLRG-----Q--ANIVTRVHC 296 (493)
Q Consensus 231 s~~v~Isns~ig~~~t~ggd~~e~~f~gtGI~l~gN-d~~ItD~~i~sa~-----~G-I~v~g-----q--~~ii~gvh~ 296 (493)
++. ++++|+|.... |- +=|+ .....+|.|.+-. .| |...+ + +.++.+|++
T Consensus 139 ~r~-~~~~c~I~G~v----DF-----------IfG~~~avf~~c~i~~~~~~~~~~~~itA~~r~~~~~~~G~vf~~c~i 202 (317)
T 1xg2_A 139 QRQ-FYRDSYVTGTV----DF-----------IFGNAAVVFQKCQLVARKPGKYQQNMVTAQGRTDPNQATGTSIQFCNI 202 (317)
T ss_dssp SEE-EEESCEEEESS----SC-----------EEECCEEEEESCEEEECCCSTTCCEEEEEECCCCTTSCCEEEEESCEE
T ss_pred ccE-EEEeeEEEece----eE-----------EcCCceEEEeeeEEEEeccCCCCccEEEecCcCCCCCCcEEEEECCEE
Confidence 764 89999997433 11 1122 1244455555422 23 33333 2 568888888
Q ss_pred ecccccc---cceeEEEeccc--cccceecccccc
Q 011125 297 YNKATAF---GGIGILVKLAD--AALTRIDNCYLD 326 (493)
Q Consensus 297 yN~~t~~---GG~Gi~~~~~~--~~~~rI~ncyld 326 (493)
....... +-.-.||-||= .+++=+.+|||+
T Consensus 203 ~~~~~~~~~~~~~~~yLGRpW~~~sr~v~~~t~~~ 237 (317)
T 1xg2_A 203 IASSDLEPVLKEFPTYLGRPWKEYSRTVVMESYLG 237 (317)
T ss_dssp EECTTTGGGTTTSCEEEECCSSTTCEEEEESCEEC
T ss_pred ecCCCccccccceeEEeecccCCCceEEEEecccC
Confidence 6432111 11246777754 567778888876
No 27
>3jur_A EXO-poly-alpha-D-galacturonosidase; beta-helix, cell WALL biogenesis/degradation, glycosidase; 2.05A {Thermotoga maritima}
Probab=97.33 E-value=0.012 Score=62.00 Aligned_cols=168 Identities=13% Similarity=0.201 Sum_probs=105.3
Q ss_pred ccccceeeeeeEeecc-eeecceEEeeeecEEEeeeEEeeeccCcEEEee------------eeeEEEeeeeeeeccccC
Q 011125 182 TYYEDITFRDVLFDSG-FRGGGIFVIDSARIRINNCFFLHFTTQGILVQR------------GHETFISSCFLGQRSTVG 248 (493)
Q Consensus 182 ~~~~~IT~~~lv~D~n-~~ggGI~v~nSq~v~I~NC~~~~fnTDGI~V~~------------s~~v~Isns~ig~~~t~g 248 (493)
..|+.+++.++.++.. ...+|+.+..|+.+.|.||++.. ++|+|.+.+ ++.+.|+||++-...
T Consensus 219 ~~~~nv~i~~v~I~~~~~NtDGidi~~s~nV~I~n~~i~~-gDDcIaiksg~~~dg~~~~~ps~nI~I~n~~~~~~~--- 294 (448)
T 3jur_A 219 VLSENVIIRNIEISSTGPNNDGIDPESCKYMLIEKCRFDT-GDDSVVIKSGRDADGRRIGVPSEYILVRDNLVISQA--- 294 (448)
T ss_dssp ESCEEEEEESCEEEECSTTCCSBCCBSCEEEEEESCEEEE-SSEEEEEBCCCHHHHHHHCCCEEEEEEESCEEECSS---
T ss_pred eccCCEEEEeEEEeeccCCCccccccCCcCEEEEeeEEEe-CCCcEEeccCccccccccCCCceeEEEEEeEEecCC---
Confidence 4677888888777763 34578999999999999999875 899999986 479999999982101
Q ss_pred CCCCccccceEEEEEccC------CceeeeEEEeecceeEEEe---cceeEEEeeEEecccccccceeEEEeccccccce
Q 011125 249 GDPGEKGFSGTAIDLASN------DNAITDVTIFSAAIGVLLR---GQANIVTRVHCYNKATAFGGIGILVKLADAALTR 319 (493)
Q Consensus 249 gd~~e~~f~gtGI~l~gN------d~~ItD~~i~sa~~GI~v~---gq~~ii~gvh~yN~~t~~GG~Gi~~~~~~~~~~r 319 (493)
.+-||.+.+. +=+|.|+.+.+...|+.+- +..-.++++++.|+.-.--...+ .+
T Consensus 295 --------gh~gisiGS~~~~~v~nV~v~n~~~~~t~~GirIKt~~g~gG~v~nI~f~ni~m~~v~~~~---------i~ 357 (448)
T 3jur_A 295 --------SHGGLVIGSEMSGGVRNVVARNNVYMNVERALRLKTNSRRGGYMENIFFIDNVAVNVSEEV---------IR 357 (448)
T ss_dssp --------CSEEEEECSSCTTCEEEEEEESCEEESCSEEEEEECCTTTCSEEEEEEEESCEEEEESSEE---------EE
T ss_pred --------CcceEEECCcccCcEEEEEEEEEEEecccceEEEEEEcCCCceEeeEEEEEEEEECCcccc---------EE
Confidence 1335666422 1277888888888999884 33456888888888422111122 12
Q ss_pred ecccccccceeeeeC-C--eeEEEEceeeee-cceeEEEee-cceeeeeEEEeeeccCC
Q 011125 320 IDNCYLDYTGIVLED-P--VQVHVTNGFFLG-DANIVLKSI-KGRISGLTIVENMFNGS 373 (493)
Q Consensus 320 I~ncyldy~~iv~~d-~--~~~~It~~~flg-~a~v~l~~~-~~~~~g~~I~~N~~~g~ 373 (493)
|+-+|-+- ..+. | .+|++.+-...+ ..-+.|... +..++++.+-|-.+++.
T Consensus 358 I~~~Y~~~---~~~~~~~i~nI~~~NI~~t~~~~~i~i~g~~~~p~~~I~~~nv~i~~~ 413 (448)
T 3jur_A 358 INLRYDNE---EGEYLPVVRSVFVKNLKATGGKYAVRIEGLENDYVKDILISDTIIEGA 413 (448)
T ss_dssp EESCGGGC---CCSCCCEEEEEEEESCEEEECSEEEEEECBTTBCEEEEEEEEEEEESC
T ss_pred EEeeccCC---CCCCCceEEEEEEEeEEEEecceEEEEEeCCCCCEeeEEEEEEEEEcc
Confidence 33333221 0111 1 455555544443 222334443 24677777777777776
No 28
>1hg8_A Endopolygalacturonase; hydrolase, pectin degradation; HET: NAG; 1.73A {Fusarium moniliforme} SCOP: b.80.1.3
Probab=97.26 E-value=0.013 Score=59.49 Aligned_cols=104 Identities=15% Similarity=0.286 Sum_probs=80.1
Q ss_pred ccccceeeeeeEeecc---------------eeecceEEeeeecEEEeeeEEeeeccCcEEEeeeeeEEEeeeeeeeccc
Q 011125 182 TYYEDITFRDVLFDSG---------------FRGGGIFVIDSARIRINNCFFLHFTTQGILVQRGHETFISSCFLGQRST 246 (493)
Q Consensus 182 ~~~~~IT~~~lv~D~n---------------~~ggGI~v~nSq~v~I~NC~~~~fnTDGI~V~~s~~v~Isns~ig~~~t 246 (493)
..|..+++.++.++.. ...+|+.+..|+.+.|.||++. ..+|+|.+..++.+.|++|++..
T Consensus 133 ~~~~nv~i~~~~I~~~~~~~~~~~~~~~~~~~NtDGid~~~s~nV~I~n~~i~-~gDDcIaiksg~nI~i~n~~~~~--- 208 (349)
T 1hg8_A 133 TGSSQLTISGLILDNRAGDKPNAKSGSLPAAHNTDGFDISSSDHVTLDNNHVY-NQDDCVAVTSGTNIVVSNMYCSG--- 208 (349)
T ss_dssp ESCEEEEEEEEEEECGGGSSCCTTTTTSCSCCSCCSEEEESCEEEEEEEEEEE-CSSCSEEESSEEEEEEEEEEEES---
T ss_pred eccCCEEEEEEEEECCCCccccccccccccCCCCCeEEEccccEEEEEeeEEe-cCCCeEEeeCCeEEEEEeEEEeC---
Confidence 4578888888888763 2467999999999999999986 58999999999999999999861
Q ss_pred cCCCCCccccceEEEEEcc----C-----CceeeeEEEeecceeEEEe---cceeEEEeeEEeccc
Q 011125 247 VGGDPGEKGFSGTAIDLAS----N-----DNAITDVTIFSAAIGVLLR---GQANIVTRVHCYNKA 300 (493)
Q Consensus 247 ~ggd~~e~~f~gtGI~l~g----N-----d~~ItD~~i~sa~~GI~v~---gq~~ii~gvh~yN~~ 300 (493)
+-||.+.+ . +=.|.|+++.+...|+.+. |..-.++++++.|+.
T Consensus 209 -----------ghGisiGS~G~~~~~~v~nV~v~n~~~~~~~~GirIKt~~g~~G~v~nI~~~ni~ 263 (349)
T 1hg8_A 209 -----------GHGLSIGSVGGKSDNVVDGVQFLSSQVVNSQNGCRIKSNSGATGTINNVTYQNIA 263 (349)
T ss_dssp -----------SCCEEEEEESSSSCCEEEEEEEEEEEEEEEEEEEEEEEETTCCEEEEEEEEEEEE
T ss_pred -----------CcceEEccccccccCCEEEEEEEEEEEECCCcEEEEEecCCCCccccceEEEEEE
Confidence 12355531 1 1277888888888999985 333468888888885
No 29
>2inu_A Insulin fructotransferase; right-handed parallel beta-helix, lyase; 1.80A {Bacillus SP} PDB: 2inv_A*
Probab=97.23 E-value=0.013 Score=61.38 Aligned_cols=142 Identities=18% Similarity=0.110 Sum_probs=100.8
Q ss_pred EEEeeeEEeee------ccCcEEEee-eeeEEEeeeeeeeccccCCCCCccccceEEEEEcc-CCceeeeEEEeecceeE
Q 011125 211 IRINNCFFLHF------TTQGILVQR-GHETFISSCFLGQRSTVGGDPGEKGFSGTAIDLAS-NDNAITDVTIFSAAIGV 282 (493)
Q Consensus 211 v~I~NC~~~~f------nTDGI~V~~-s~~v~Isns~ig~~~t~ggd~~e~~f~gtGI~l~g-Nd~~ItD~~i~sa~~GI 282 (493)
+.|+++.+... .+-||.++. .+...|+++.|. ....||.+++ .+..|.+-.|.+...||
T Consensus 143 v~I~G~~~~~~G~s~~~~dAGI~v~~~~d~~~I~nn~i~-------------~~~fGI~l~~a~~~~I~~N~I~e~GNgI 209 (410)
T 2inu_A 143 FCLDGVGFTPGKNSYHNGKTGIEVASDNDSFHITGMGFV-------------YLEHALIVRGADALRVNDNMIAECGNCV 209 (410)
T ss_dssp CEEECCCCSSSTTSCCCSCEEEEECSCEESCEEESCEEE-------------SCSEEEEETTEESCEEESCEEESSSEEE
T ss_pred EEEECCEeecCCCCcccCceeEEEeccCCeEEEECCEEe-------------cccEEEEEccCCCcEEECCEEEecCCce
Confidence 55555544433 367999987 777889999986 2378999994 47799999999999999
Q ss_pred EEec--ceeEEEeeEEecccccccceeEEEeccccccceeccccc-ccc--eeeeeCCeeEEEEceeeee--cceeEEEe
Q 011125 283 LLRG--QANIVTRVHCYNKATAFGGIGILVKLADAALTRIDNCYL-DYT--GIVLEDPVQVHVTNGFFLG--DANIVLKS 355 (493)
Q Consensus 283 ~v~g--q~~ii~gvh~yN~~t~~GG~Gi~~~~~~~~~~rI~ncyl-dy~--~iv~~d~~~~~It~~~flg--~a~v~l~~ 355 (493)
.++| +++.|+++++.... -|.|||+.- ....+|.+=++ .+. +|-.+....-.|++|.|.. -|-.++++
T Consensus 210 ~L~G~~~~~~I~~N~i~~~~---dG~gIyl~n--s~~~~I~~N~i~~~~R~gIh~m~s~~~~i~~N~f~~~~~Gi~~M~s 284 (410)
T 2inu_A 210 ELTGAGQATIVSGNHMGAGP---DGVTLLAEN--HEGLLVTGNNLFPRGRSLIEFTGCNRCSVTSNRLQGFYPGMLRLLN 284 (410)
T ss_dssp EECSCEESCEEESCEEECCT---TSEEEEEES--EESCEEESCEECSCSSEEEEEESCBSCEEESCEEEESSSCSEEEES
T ss_pred eeccccccceEecceeeecC---CCCEEEEEe--CCCCEEECCCcccCcceEEEEEccCCCEEECCEEecceeEEEEEEc
Confidence 9999 78899998887654 788999883 23333333333 222 6777778888899999987 34667774
Q ss_pred ecceeeeeEEEeeeccCC
Q 011125 356 IKGRISGLTIVENMFNGS 373 (493)
Q Consensus 356 ~~~~~~g~~I~~N~~~g~ 373 (493)
- =+...|.+|.|...
T Consensus 285 ~---~~~n~v~~N~f~~~ 299 (410)
T 2inu_A 285 G---CKENLITANHIRRT 299 (410)
T ss_dssp S---CBSCEEESCEEEEE
T ss_pred C---CCCCEEECCEEecc
Confidence 3 02455666666643
No 30
>1rmg_A Rgase A, rhamnogalacturonase A; hydrolase, inverting, parallel beta-helix, glycosidase; HET: NAG BMA MAN GLC; 2.00A {Aspergillus aculeatus} SCOP: b.80.1.3
Probab=97.21 E-value=0.018 Score=59.91 Aligned_cols=144 Identities=13% Similarity=0.156 Sum_probs=87.7
Q ss_pred eecceEEeeeecEEEeeeEEeeeccCcEEEeeeeeEEEeeeeeeeccccCCCCCccccceEEEEEccCCceeeeEEEeec
Q 011125 199 RGGGIFVIDSARIRINNCFFLHFTTQGILVQRGHETFISSCFLGQRSTVGGDPGEKGFSGTAIDLASNDNAITDVTIFSA 278 (493)
Q Consensus 199 ~ggGI~v~nSq~v~I~NC~~~~fnTDGI~V~~s~~v~Isns~ig~~~t~ggd~~e~~f~gtGI~l~gNd~~ItD~~i~sa 278 (493)
+-..|++.+++.+.|.++.+....-.+|++..|+.+.|+++.|-. . +. .+ .-||++.+.+-.|.|+.|..+
T Consensus 126 rp~~i~~~~~~nv~I~~iti~nsp~~~i~i~~~~nv~I~n~~I~~-~----d~--~n--tDGidi~~~nV~I~n~~i~~g 196 (422)
T 1rmg_A 126 GARILRLTDVTHFSVHDIILVDAPAFHFTMDTCSDGEVYNMAIRG-G----NE--GG--LDGIDVWGSNIWVHDVEVTNK 196 (422)
T ss_dssp CCEEEEEEEEEEEEEEEEEEECCSSCSEEEEEEEEEEEEEEEEEC-C----SS--TT--CCSEEEEEEEEEEEEEEEESS
T ss_pred CceEEEEcccceEEEECeEEECCCceEEEEeCcCCEEEEeEEEEC-C----CC--CC--CccEeecCCeEEEEeeEEeCC
Confidence 445677777888888888888777789999999999999999964 1 11 12 334666653337788888877
Q ss_pred ceeEEEec-cee-EEEeeEEecccccccceeEEEeccccccceecccccccceeeeeCCeeEEEEceeeeecce-eEEEe
Q 011125 279 AIGVLLRG-QAN-IVTRVHCYNKATAFGGIGILVKLADAALTRIDNCYLDYTGIVLEDPVQVHVTNGFFLGDAN-IVLKS 355 (493)
Q Consensus 279 ~~GI~v~g-q~~-ii~gvh~yN~~t~~GG~Gi~~~~~~~~~~rI~ncyldy~~iv~~d~~~~~It~~~flg~a~-v~l~~ 355 (493)
.-+|.+.. -.+ +|++|+|+. |-||-+.-.+ + + ..-.+|+|.++.|.+..+ +-+|.
T Consensus 197 DD~Iai~s~~~nI~I~n~~~~~------~~GisIGS~g----~-------~-----~~v~nV~v~n~~~~~~~~Gi~Ikt 254 (422)
T 1rmg_A 197 DECVTVKSPANNILVESIYCNW------SGGCAMGSLG----A-------D-----TDVTDIVYRNVYTWSSNQMYMIKS 254 (422)
T ss_dssp SEEEEEEEEEEEEEEEEEEEES------SSEEEEEEEC----T-------T-----EEEEEEEEEEEEEESSSCSEEEEE
T ss_pred CCeEEeCCCCcCEEEEeEEEcC------CcceeecccC----C-------C-----CcEEEEEEEeEEEeccceEEEEEe
Confidence 77877764 233 566666653 2244333111 0 0 013456666666655332 44554
Q ss_pred e--cceeeeeEEEeeeccCC
Q 011125 356 I--KGRISGLTIVENMFNGS 373 (493)
Q Consensus 356 ~--~~~~~g~~I~~N~~~g~ 373 (493)
. .|.++.+.+-|......
T Consensus 255 ~~g~G~v~nI~~~NI~~~~v 274 (422)
T 1rmg_A 255 NGGSGTVSNVLLENFIGHGN 274 (422)
T ss_dssp BBCCEEEEEEEEEEEEEEEE
T ss_pred cCCCcEEEEEEEEeEEEECc
Confidence 2 14556666655555443
No 31
>3gq8_A Preneck appendage protein; beta helix, viral protein; HET: NHE; 2.00A {Bacillus phage PHI29} PDB: 3gq7_A* 3gq9_A* 3gqa_A
Probab=97.19 E-value=0.019 Score=62.81 Aligned_cols=183 Identities=15% Similarity=0.132 Sum_probs=111.7
Q ss_pred ccccceeeeeeEeecce-------------eecceEEeeeecEEEeeeEEeeecc-----------CcEEEee------e
Q 011125 182 TYYEDITFRDVLFDSGF-------------RGGGIFVIDSARIRINNCFFLHFTT-----------QGILVQR------G 231 (493)
Q Consensus 182 ~~~~~IT~~~lv~D~n~-------------~ggGI~v~nSq~v~I~NC~~~~fnT-----------DGI~V~~------s 231 (493)
..++.+++.++.+|.+. +-..|.+.+++.+.|.++.+...-. |||++.+ |
T Consensus 103 ~~~~NItItG~TIDGNG~~~g~~~~~~g~~RP~lI~f~~c~NV~I~gVti~NSp~~gI~I~~~~~NDGid~DGi~fd~~S 182 (609)
T 3gq8_A 103 TGNENIFLSSFTLDGNNKRLGQGISGIGGSRESNLSIRACHNVYIRDIEAVDCTLHGIDITCGGLDYPYLGDGTTAPNPS 182 (609)
T ss_dssp TCCEEEEEEEEEEECCGGGGCSSCCCSSTTTTCSEEEESCEEEEEEEEEEESCSSCSEEEECSSSSCCCCCTTCCCSSCC
T ss_pred cccccEEEEeeEEECCccccCcccccCCCCCccEEEEEeeceEEEEeeEEEeCCCCCeEEeCCCCCccccCCCccccccc
Confidence 45677788877888731 2234667777777777777755533 4555555 8
Q ss_pred eeEEEeeeeeeeccccCCCCCccccceEEEEEccCC-ceeeeEEEe-----ecceeEEEecc-ee-EEEeeEEecccccc
Q 011125 232 HETFISSCFLGQRSTVGGDPGEKGFSGTAIDLASND-NAITDVTIF-----SAAIGVLLRGQ-AN-IVTRVHCYNKATAF 303 (493)
Q Consensus 232 ~~v~Isns~ig~~~t~ggd~~e~~f~gtGI~l~gNd-~~ItD~~i~-----sa~~GI~v~gq-~~-ii~gvh~yN~~t~~ 303 (493)
+.+.|++|+|... ||. + |.+.+.. =.|+||.+. +...||.+.+. .+ .+++|++++...
T Consensus 183 ~NV~I~Nc~I~~t----GDD------c--IaIksseNI~I~Nc~~~gp~G~S~~~GIsIGsgs~NVtV~Nc~i~nt~~-- 248 (609)
T 3gq8_A 183 ENIWIENCEATGF----GDD------G--ITTHHSQYINILNCYSHDPRLTANCNGFEIDDGSRHVVLSNNRSKGCYG-- 248 (609)
T ss_dssp EEEEEESCEEESC----SSC------S--EEECSCEEEEEESCEEECCSSCSSCCSEEECTTCEEEEEESEEEESSSE--
T ss_pred eeEEEEeeEEEec----CCC------E--EEecCCeeEEEEeEEEECCCCCCCcccEEccCCcccEEEEeeEEECCCC--
Confidence 9999999999311 222 2 4555443 389999884 34689999754 44 677777777643
Q ss_pred cceeEEEec----cccccceecccccccceee-----------eeCC-----eeEEEEceeeee----------cceeEE
Q 011125 304 GGIGILVKL----ADAALTRIDNCYLDYTGIV-----------LEDP-----VQVHVTNGFFLG----------DANIVL 353 (493)
Q Consensus 304 GG~Gi~~~~----~~~~~~rI~ncyldy~~iv-----------~~d~-----~~~~It~~~flg----------~a~v~l 353 (493)
|+.+|- +....-+|.||. .|..++ ++|| .+|.++++.-+- .+-=+|
T Consensus 249 ---GIrIKt~~~~~~v~NV~I~n~v-s~~nvrsyn~r~iG~~~a~dp~s~~a~nV~l~n~~~~~p~~~~~~y~~~~~r~l 324 (609)
T 3gq8_A 249 ---GIEIKAHGDAPAAYNISINGHM-SVEDVRSYNFRHIGHHAATAPQSVSAKNIVASNLVSIRPNNKRGFQDNATPRVL 324 (609)
T ss_dssp ---EEEEEECTTSCCCEEEEEEEEE-EESCSEEEEEEETTSCSTTSCCCSSCEEEEEEEEEEESCCCTTCHHHHCCCEEE
T ss_pred ---EEEEEecCCCCccccEEEECCE-eecCceEecceEEccccCCCCCcceecceEeecceEEeecccCceeeCCCcceE
Confidence 566661 225566677772 333222 2233 566666654332 111122
Q ss_pred EeecceeeeeEEEeeeccCCCC--CCcceEeec
Q 011125 354 KSIKGRISGLTIVENMFNGSPA--RNVPIIKLD 384 (493)
Q Consensus 354 ~~~~~~~~g~~I~~N~~~g~~~--~gv~iv~~~ 384 (493)
.. ...++++|.++.+.|+|. .+-|++.++
T Consensus 325 ~v--s~~~~v~i~~~~~~~d~~y~~~~~~~~~q 355 (609)
T 3gq8_A 325 AV--SAYYGVVINGLTGYTDDPNLLTETVVSVQ 355 (609)
T ss_dssp EE--ESCEEEEEEEEEEECSCTTSCCSEEEEEE
T ss_pred EE--EcCCCeEEcCceEccCCccccCCceEEEE
Confidence 22 256899999999999972 224666553
No 32
>1ia5_A Polygalacturonase; glycosylhydrolase, hydrolase; HET: MAN NAG; 2.00A {Aspergillus aculeatus} SCOP: b.80.1.3 PDB: 1ib4_A*
Probab=97.16 E-value=0.0091 Score=60.27 Aligned_cols=93 Identities=13% Similarity=0.117 Sum_probs=59.9
Q ss_pred cceEEeeeecEEEeeeEEeeeccCcEEEeeeeeEEEeeeeeeeccccCCCCCccccceEEEEEccCCc-eeeeEEEeecc
Q 011125 201 GGIFVIDSARIRINNCFFLHFTTQGILVQRGHETFISSCFLGQRSTVGGDPGEKGFSGTAIDLASNDN-AITDVTIFSAA 279 (493)
Q Consensus 201 gGI~v~nSq~v~I~NC~~~~fnTDGI~V~~s~~v~Isns~ig~~~t~ggd~~e~~f~gtGI~l~gNd~-~ItD~~i~sa~ 279 (493)
..+++.+++.+.|.++.+......+|++..|+.+.|+++.|-... ++. ......-||++.+..+ .|.|+.|..+.
T Consensus 105 ~~i~~~~~~nv~i~~i~i~nsp~~~i~i~~~~nv~i~~~~I~~~~---~d~-~~~~ntDGid~~~s~nV~I~n~~i~~gD 180 (339)
T 1ia5_A 105 KFFAAHSLTNSVISGLKIVNSPVQVFSVAGSDYLTLKDITIDNSD---GDD-NGGHNTDAFDIGTSTYVTISGATVYNQD 180 (339)
T ss_dssp CCEEEEEEEEEEEESCEEECCSSCCEEEESCEEEEEESCEEECGG---GTT-TTCCSCCSEEEESCEEEEEESCEEECSS
T ss_pred eEEEEeecCcEEEEEEEEEcCCcceEEEecccCeEEeeEEEECCc---ccc-ccCCCCCcEEecCCceEEEEeeEEEcCC
Confidence 357777788888888888887889999999999999999996432 111 0011133467765433 66666666666
Q ss_pred eeEEEecc-eeEEEeeEEe
Q 011125 280 IGVLLRGQ-ANIVTRVHCY 297 (493)
Q Consensus 280 ~GI~v~gq-~~ii~gvh~y 297 (493)
-+|.+... .-+|++++|+
T Consensus 181 DcIaiksg~nI~i~n~~~~ 199 (339)
T 1ia5_A 181 DCVAVNSGENIYFSGGYCS 199 (339)
T ss_dssp CSEEESSEEEEEEESCEEE
T ss_pred CeEEEeCCeEEEEEeEEEE
Confidence 66666432 2245555555
No 33
>2iq7_A Endopolygalacturonase; parallel beta helix, hydrolase; HET: NAG MAN PG4; 1.94A {Colletotrichum lupini}
Probab=97.16 E-value=0.0082 Score=60.52 Aligned_cols=80 Identities=11% Similarity=0.124 Sum_probs=50.3
Q ss_pred cceEEeeeecEEEeeeEEeeeccCcEEEeeeeeEEEeeeeeeeccccCCCCCccccceEEEEEccCCc-eeeeEEEeecc
Q 011125 201 GGIFVIDSARIRINNCFFLHFTTQGILVQRGHETFISSCFLGQRSTVGGDPGEKGFSGTAIDLASNDN-AITDVTIFSAA 279 (493)
Q Consensus 201 gGI~v~nSq~v~I~NC~~~~fnTDGI~V~~s~~v~Isns~ig~~~t~ggd~~e~~f~gtGI~l~gNd~-~ItD~~i~sa~ 279 (493)
..+++.+++.+.|.++.+......+|++..|+.+.|+++.|-.... +. ......-||++.+..+ .|.|+.|..+.
T Consensus 101 ~~i~~~~~~nv~i~giti~nsp~~~i~i~~~~nv~i~~~~I~~~~~---d~-~~~~ntDGid~~~s~nV~I~n~~i~~gD 176 (339)
T 2iq7_A 101 KFFYAHSLKSSNIKGLNVLNTPVQAFSINSATTLGVYDVIIDNSAG---DS-AGGHNTDAFDVGSSTGVYISGANVKNQD 176 (339)
T ss_dssp CCEEEEEEEEEEEECCEEECCSSCCEEEESCEEEEEESCEEECGGG---GG-TTCCSCCSEEEESCEEEEEESCEEECSS
T ss_pred eEEEEeeeCcEEEEEEEEEeCCcceEEEeccCCEEEEEEEEECCcc---cc-ccCCCCCcEEEcCcceEEEEecEEecCC
Confidence 4577777888888888888777899999999999999999864321 10 0001122366654422 55555555444
Q ss_pred eeEEE
Q 011125 280 IGVLL 284 (493)
Q Consensus 280 ~GI~v 284 (493)
-+|.+
T Consensus 177 Dciai 181 (339)
T 2iq7_A 177 DCLAI 181 (339)
T ss_dssp CSEEE
T ss_pred CEEEE
Confidence 44444
No 34
>1ru4_A Pectate lyase, PEL9A; parallel beta-helix; 1.60A {Erwinia chrysanthemi} SCOP: b.80.1.9
Probab=96.95 E-value=0.0039 Score=64.68 Aligned_cols=148 Identities=12% Similarity=0.147 Sum_probs=90.9
Q ss_pred eeecEEEeeeEEeeeccCcEEEeeeeeEEEeeeeeeeccccCCCCCccccceEEEEEcc--CCceeeeEEEeecc-----
Q 011125 207 DSARIRINNCFFLHFTTQGILVQRGHETFISSCFLGQRSTVGGDPGEKGFSGTAIDLAS--NDNAITDVTIFSAA----- 279 (493)
Q Consensus 207 nSq~v~I~NC~~~~fnTDGI~V~~s~~v~Isns~ig~~~t~ggd~~e~~f~gtGI~l~g--Nd~~ItD~~i~sa~----- 279 (493)
....+.|.++++.+....||.+++ +...|++|.|... ..+||.+.+ .++.|.++.|.+..
T Consensus 113 ~~~~~~i~gl~I~n~g~~GI~v~g-s~~~i~n~~i~~n------------~~~GI~l~~~~s~n~I~nn~i~~N~d~~~~ 179 (400)
T 1ru4_A 113 TGDYWYFKGVEVTRAGYQGAYVIG-SHNTFENTAFHHN------------RNTGLEINNGGSYNTVINSDAYRNYDPKKN 179 (400)
T ss_dssp CSSCEEEESEEEESCSSCSEEECS-SSCEEESCEEESC------------SSCSEEECTTCCSCEEESCEEECCCCTTTT
T ss_pred ECCeEEEEeEEEEeCCCCcEEEeC-CCcEEEeEEEECC------------CceeEEEEcccCCeEEEceEEEcccCcccc
Confidence 455688888888777778999987 5668999999621 134688874 26789999887643
Q ss_pred ----eeEEEe---cceeEEEeeEEecccccccceeEEEeccccccceecccccccc---------------eeee---eC
Q 011125 280 ----IGVLLR---GQANIVTRVHCYNKATAFGGIGILVKLADAALTRIDNCYLDYT---------------GIVL---ED 334 (493)
Q Consensus 280 ----~GI~v~---gq~~ii~gvh~yN~~t~~GG~Gi~~~~~~~~~~rI~ncyldy~---------------~iv~---~d 334 (493)
.|+.+. +..++|++|++|+. ..-|+++..+. ....|.||..-.+ ++.+ ..
T Consensus 180 g~~~dG~~~~~~~g~Gn~~~~~~~~~N----~ddGidl~~~~-~~v~i~nn~a~~Ng~~~~~~n~~~gngnGf~lgg~~~ 254 (400)
T 1ru4_A 180 GSMADGFGPKQKQGPGNRFVGCRAWEN----SDDGFDLFDSP-QKVVIENSWAFRNGINYWNDSAFAGNGNGFKLGGNQA 254 (400)
T ss_dssp TSSCCSEEECTTCCSCCEEESCEEESC----SSCSEECTTCC-SCCEEESCEEESTTCCCSCCTTCCCCCCSEECCCTTC
T ss_pred CcccceEEEEecccCCeEEECCEEeec----CCCcEEEEecC-CCEEEEeEEEECCccccccccccccCCCCEEEeccCC
Confidence 467665 46889999998877 44566654322 3456777744222 2332 12
Q ss_pred CeeEEEEceeeeecceeEEEeecceeeeeEEEeeeccCC
Q 011125 335 PVQVHVTNGFFLGDANIVLKSIKGRISGLTIVENMFNGS 373 (493)
Q Consensus 335 ~~~~~It~~~flg~a~v~l~~~~~~~~g~~I~~N~~~g~ 373 (493)
+....|.+|...+...-=+.. ++.-..+.|.||++.++
T Consensus 255 ~~~~~v~nn~a~~N~~~G~~~-n~~~~~~~i~nNt~~~N 292 (400)
T 1ru4_A 255 VGNHRITRSVAFGNVSKGFDQ-NNNAGGVTVINNTSYKN 292 (400)
T ss_dssp CCCCEEESCEEESCSSEEEEC-TTCSSCCEEESCEEESS
T ss_pred cCCEEEEeeEEECCcCcCEee-cCCCCCEEEECeEEECC
Confidence 344555555555543322222 12222356666666555
No 35
>1nhc_A Polygalacturonase I; beta-helix, hydrolase; HET: MAN NAG BMA; 1.70A {Aspergillus niger} SCOP: b.80.1.3
Probab=96.94 E-value=0.022 Score=57.39 Aligned_cols=80 Identities=13% Similarity=0.181 Sum_probs=50.3
Q ss_pred cceEEeeeecEEEeeeEEeeeccCcEEEeeeeeEEEeeeeeeeccccCCCCCccccceEEEEEccCCc-eeeeEEEeecc
Q 011125 201 GGIFVIDSARIRINNCFFLHFTTQGILVQRGHETFISSCFLGQRSTVGGDPGEKGFSGTAIDLASNDN-AITDVTIFSAA 279 (493)
Q Consensus 201 gGI~v~nSq~v~I~NC~~~~fnTDGI~V~~s~~v~Isns~ig~~~t~ggd~~e~~f~gtGI~l~gNd~-~ItD~~i~sa~ 279 (493)
..+++.+++.+.|.++.+......+|++. |+.+.|++..|-.... +. ......-||++.+..+ .|.|+.|..+.
T Consensus 101 ~~i~~~~~~nv~i~~i~i~nsp~~~i~i~-~~nv~i~~~~I~~~~~---d~-~~~~ntDGidi~~s~nV~I~n~~i~~gD 175 (336)
T 1nhc_A 101 KFMYIHDVEDSTFKGINIKNTPVQAISVQ-ATNVHLNDFTIDNSDG---DD-NGGHNTDGFDISESTGVYISGATVKNQD 175 (336)
T ss_dssp CCEEEEEEEEEEEESCEEECCSSCCEEEE-EEEEEEESCEEECTTH---HH-HTCCSCCSEEECSCEEEEEESCEEESSS
T ss_pred eEEEEeeeCcEEEEEEEEEeCCccEEEEE-eCCEEEEEEEEECCCc---cc-ccCCCCCcEEecCCCeEEEEeCEEEcCC
Confidence 35677777778888888877777889999 9999999999863210 00 0001123467765422 55666555555
Q ss_pred eeEEEe
Q 011125 280 IGVLLR 285 (493)
Q Consensus 280 ~GI~v~ 285 (493)
-+|.+.
T Consensus 176 Dciaik 181 (336)
T 1nhc_A 176 DCIAIN 181 (336)
T ss_dssp EEEEES
T ss_pred CEEEEe
Confidence 555553
No 36
>3gqn_A Preneck appendage protein; beta helix, beta barrel, ATP binding, viral protein; HET: ATP; 2.15A {Bacillus phage PHI29} PDB: 3suc_A*
Probab=96.86 E-value=0.057 Score=60.45 Aligned_cols=183 Identities=15% Similarity=0.133 Sum_probs=112.6
Q ss_pred ccccceeeeeeEeecce-------------eecceEEeeeecEEEeeeEEeeecc-----------CcEEEee------e
Q 011125 182 TYYEDITFRDVLFDSGF-------------RGGGIFVIDSARIRINNCFFLHFTT-----------QGILVQR------G 231 (493)
Q Consensus 182 ~~~~~IT~~~lv~D~n~-------------~ggGI~v~nSq~v~I~NC~~~~fnT-----------DGI~V~~------s 231 (493)
..++.+++.++.+|.+. +-..|.+.+++.+.|.++.+...-. |||++.+ |
T Consensus 103 ~gveNItItG~TIDGNG~~~g~~~~~~g~~RP~lI~f~~ckNV~I~gVti~NSp~~gI~I~np~~NDGid~DGi~fdi~S 182 (772)
T 3gqn_A 103 TGNENIFLSSFTLDGNNKRLGQGISGIGGSRESNLSIRACHNVYIRDIEAVDCTLHGIDITCGGLDYPYLGDGTTAPNPS 182 (772)
T ss_dssp TCCEEEEEEEEEEECCGGGGCSSCCCSSTTTTCSEEEESCEEEEEEEEEEESCSSCSEEEECSSSSCCCCCTTCCCSSCC
T ss_pred cCceeEEEEeeEEeCCccccCcccccCCCCCccEEEEEeeceEEEEeEEEEeCCCCCEEEeCCCcCCcCCCcCccccccc
Confidence 45677788777888731 2234667777777777777755433 5555555 8
Q ss_pred eeEEEeeeeeeeccccCCCCCccccceEEEEEccCCc-eeeeEEEe-----ecceeEEEecc-ee-EEEeeEEecccccc
Q 011125 232 HETFISSCFLGQRSTVGGDPGEKGFSGTAIDLASNDN-AITDVTIF-----SAAIGVLLRGQ-AN-IVTRVHCYNKATAF 303 (493)
Q Consensus 232 ~~v~Isns~ig~~~t~ggd~~e~~f~gtGI~l~gNd~-~ItD~~i~-----sa~~GI~v~gq-~~-ii~gvh~yN~~t~~ 303 (493)
+.+.|++|+|-.. ||. + |.+.+..+ .|.||.+. +...||.+.+. .+ ++++|++++...
T Consensus 183 ~NV~I~Nc~I~nt----GDD------c--IAIksSeNI~I~Nc~c~gphG~S~~~GIsIGsgs~NVtV~Nc~~~nT~n-- 248 (772)
T 3gqn_A 183 ENIWIENCEATGF----GDD------G--ITTHHSQYINILNCYSHDPRLTANCNGFEIDDGSRHVVLSNNRSKGCYG-- 248 (772)
T ss_dssp EEEEEESCEEESC----SSC------S--EEECSCEEEEEESCEEECCSSSSSCCSEEECTTCEEEEEEEEEEESSSE--
T ss_pred ceEEEEeeEEEec----CcC------e--EEecCCceEEEEeEEEECCCCCCCcccEEecCCcccEEEEceEEECCCc--
Confidence 9999999999311 222 3 45565434 89999984 34689999764 44 688888887653
Q ss_pred cceeEEEe-c---cccccceecccccccceee-----------eeCC-----eeEEEEceeeee----------cceeEE
Q 011125 304 GGIGILVK-L---ADAALTRIDNCYLDYTGIV-----------LEDP-----VQVHVTNGFFLG----------DANIVL 353 (493)
Q Consensus 304 GG~Gi~~~-~---~~~~~~rI~ncyldy~~iv-----------~~d~-----~~~~It~~~flg----------~a~v~l 353 (493)
|+.+| + +...+-+|.+|. .+..++ +.|| .+|.++++.-+- .+-=+|
T Consensus 249 ---GIRIKt~~~gg~v~NV~I~gni-s~~dvrsynir~iG~h~a~dp~s~~a~nV~l~n~~~~~P~~~~~ly~~~~praL 324 (772)
T 3gqn_A 249 ---GIEIKAHGDAPAAYNISINGHM-SVEDVRSYNFRHIGHHAATAPQSVSAKNIVASNLVSIRPNNKRGFQDNATPRVL 324 (772)
T ss_dssp ---EEEECCCTTSCCCEEEEEEEEE-EESCSEEEEECCTTSCSSSSCCCSSCEEEEEEEEEEESCCCSSCHHHHCCCEEE
T ss_pred ---EEEEEEeCCCCccccEEEECCE-EeccCeEecceEEccccCCCCCCccCccEEeecceEEcccccCceeeCCCcceE
Confidence 56666 2 225555677663 333322 2233 667777664332 111122
Q ss_pred EeecceeeeeEEEeeeccCCCC--CCcceEeec
Q 011125 354 KSIKGRISGLTIVENMFNGSPA--RNVPIIKLD 384 (493)
Q Consensus 354 ~~~~~~~~g~~I~~N~~~g~~~--~gv~iv~~~ 384 (493)
.. ...++++|.++.+.|+|+ .+-|++.++
T Consensus 325 ~v--say~~v~i~~~~~igd~~y~~~~~~i~~q 355 (772)
T 3gqn_A 325 AV--SAYYGVVINGLTGYTDDPNLLTETVVSVQ 355 (772)
T ss_dssp EE--ESCEEEEEEEEEEECSCTTSCCSEEEEEE
T ss_pred EE--EcCCCcEecCceeccCcccccCCceEEEE
Confidence 22 256899999999999972 224666653
No 37
>1bhe_A PEHA, polygalacturonase; family 28 glycosyl hydrolase, hydrolyses polygalacturonic acid, glycosidase; 1.90A {Pectobacterium carotovorum subsp} SCOP: b.80.1.3
Probab=96.73 E-value=0.024 Score=57.73 Aligned_cols=141 Identities=11% Similarity=0.119 Sum_probs=98.2
Q ss_pred EEEEccC-CceeeeEEEe-ecceeEEEecc-eeEEEeeEEecccccccceeEEEeccccccceecccccccc--eeeee-
Q 011125 260 AIDLASN-DNAITDVTIF-SAAIGVLLRGQ-ANIVTRVHCYNKATAFGGIGILVKLADAALTRIDNCYLDYT--GIVLE- 333 (493)
Q Consensus 260 GI~l~gN-d~~ItD~~i~-sa~~GI~v~gq-~~ii~gvh~yN~~t~~GG~Gi~~~~~~~~~~rI~ncyldy~--~iv~~- 333 (493)
.|.+... +-.|.|+.+. +...++.+.+- .-+++++++.+...+.-+=||-+. .-+.-+|.||+++-. .|.+.
T Consensus 153 ~i~~~~~~nv~I~~iti~nsp~~~i~~~~~~~v~i~~v~I~~~~~~~NtDGid~~--~s~nV~I~n~~i~~gDDcIaiks 230 (376)
T 1bhe_A 153 LIQINKSKNFTLYNVSLINSPNFHVVFSDGDGFTAWKTTIKTPSTARNTDGIDPM--SSKNITIAYSNIATGDDNVAIKA 230 (376)
T ss_dssp SEEEESCEEEEEEEEEEECCSSCSEEEESCEEEEEEEEEEECCTTCSSCCSEEEE--SCEEEEEESCEEECSSCSEEEEE
T ss_pred EEEEEcceEEEEEeEEEECCCcEEEEEeCCCcEEEEeEEEECCCCCCCCceEeec--CCceEEEEeCEEecCCCeEEEcc
Confidence 3555532 3356666665 35566666544 346777777776555566677654 246678888887643 55555
Q ss_pred -----CCeeEEEEceeeeecceeEEEeecceeeeeEEEeeeccCCCCCCcceEeecCceeeeeeEEEeeecccce
Q 011125 334 -----DPVQVHVTNGFFLGDANIVLKSIKGRISGLTIVENMFNGSPARNVPIIKLDGEFSNIDQVVIERNNVNGM 403 (493)
Q Consensus 334 -----d~~~~~It~~~flg~a~v~l~~~~~~~~g~~I~~N~~~g~~~~gv~iv~~~g~f~~i~~v~vd~n~~~gm 403 (493)
...+|.|++|.|.+..-+.+=|+...++.+.+-||.|.+. ..|++|=-..|.--.|.+|.+++...+++
T Consensus 231 ~~~~~~s~nI~I~n~~~~~ghGisiGSe~~~v~nV~v~n~~~~~t-~~GirIKt~~g~~G~v~ni~f~ni~~~~v 304 (376)
T 1bhe_A 231 YKGRAETRNISILHNDFGTGHGMSIGSETMGVYNVTVDDLKMNGT-TNGLRIKSDKSAAGVVNGVRYSNVVMKNV 304 (376)
T ss_dssp CTTSCCEEEEEEEEEEECSSSCEEEEEEESSEEEEEEEEEEEESC-SEEEEEECCTTTCCEEEEEEEEEEEEESC
T ss_pred cCCCCCceEEEEEeeEEEccccEEeccCCccEeeEEEEeeEEeCC-CcEEEEEEecCCCceEeeEEEEeEEEeCC
Confidence 3489999999999876688888755899999999999999 88888765555556678888877755543
No 38
>1czf_A Polygalacturonase II; beta helix, hydrolase; HET: NAG; 1.68A {Aspergillus niger} SCOP: b.80.1.3
Probab=96.71 E-value=0.02 Score=58.46 Aligned_cols=93 Identities=11% Similarity=0.087 Sum_probs=64.8
Q ss_pred cceEEeeeecEEEeeeEEeeeccCcEEEeeeeeEEEeeeeeeeccccCCCCCccccceEEEEEccCCc-eeeeEEEeecc
Q 011125 201 GGIFVIDSARIRINNCFFLHFTTQGILVQRGHETFISSCFLGQRSTVGGDPGEKGFSGTAIDLASNDN-AITDVTIFSAA 279 (493)
Q Consensus 201 gGI~v~nSq~v~I~NC~~~~fnTDGI~V~~s~~v~Isns~ig~~~t~ggd~~e~~f~gtGI~l~gNd~-~ItD~~i~sa~ 279 (493)
..+++.+++.+.|.+..+...--.+|++. |+.+.|++++|-.... +. ......-||++.+..+ .|.|+.|..+.
T Consensus 127 ~~i~~~~~~nv~i~~iti~nsp~~~i~i~-~~nv~i~~~~I~~~~~---d~-~~~~NtDGidi~~s~nV~I~n~~i~~gD 201 (362)
T 1czf_A 127 KFFYAHGLDSSSITGLNIKNTPLMAFSVQ-ANDITFTDVTINNADG---DT-QGGHNTDAFDVGNSVGVNIIKPWVHNQD 201 (362)
T ss_dssp CCEEEEEEETEEEESCEEECCSSCCEEEE-CSSEEEESCEEECGGG---GT-TTCCSCCSEEECSCEEEEEESCEEECSS
T ss_pred eEEEEeecccEEEEEEEEecCCccEEEEe-eCCEEEEEEEEECCcc---cc-ccCCCCCceeecCcceEEEEeeEEecCC
Confidence 35777778778888887777767889999 9999999999974321 11 0011233488886544 88888888888
Q ss_pred eeEEEecc-eeEEEeeEEec
Q 011125 280 IGVLLRGQ-ANIVTRVHCYN 298 (493)
Q Consensus 280 ~GI~v~gq-~~ii~gvh~yN 298 (493)
-+|.+... .-+|++++|+.
T Consensus 202 DcIaiksg~nI~i~n~~~~~ 221 (362)
T 1czf_A 202 DCLAVNSGENIWFTGGTCIG 221 (362)
T ss_dssp CSEEESSEEEEEEESCEEES
T ss_pred CEEEEeCCeEEEEEEEEEeC
Confidence 88888643 33677777774
No 39
>2uvf_A Exopolygalacturonase; GH28, pectin, cell WALL, hydrolase, periplasm, beta-helix, glycosidase, EXO-activity; HET: AD0; 2.1A {Yersinia enterocolitica} PDB: 2uve_A*
Probab=96.65 E-value=0.053 Score=58.90 Aligned_cols=78 Identities=9% Similarity=0.095 Sum_probs=56.1
Q ss_pred eecceEEeeeecEEEeeeEEeeeccCcEEEeeeeeEEEeeeeeeeccccCCCCCccccceEEEEEccC-CceeeeEEEee
Q 011125 199 RGGGIFVIDSARIRINNCFFLHFTTQGILVQRGHETFISSCFLGQRSTVGGDPGEKGFSGTAIDLASN-DNAITDVTIFS 277 (493)
Q Consensus 199 ~ggGI~v~nSq~v~I~NC~~~~fnTDGI~V~~s~~v~Isns~ig~~~t~ggd~~e~~f~gtGI~l~gN-d~~ItD~~i~s 277 (493)
|-..|.+.+++.+.|.++.+....--+|++..|+.+.|++..+... +. ...-||++.+. +-.|.|+.|..
T Consensus 330 rP~~i~~~~~~nv~I~giti~ns~~~~i~~~~~~nv~i~~v~i~~~-----~~----~NtDGidi~~s~nV~I~n~~i~~ 400 (608)
T 2uvf_A 330 RSSLMTLRGVENVYLAGFTVRNPAFHGIMNLENHNVVANGLIHQTY-----DA----NNGDGIEFGNSQNVMVFNNFFDT 400 (608)
T ss_dssp SCCSEEEESEEEEEEESCEEECCSSCSEEEESCEEEEEESCEEECT-----TC----TTCCSEEEESCEEEEEESCEEEC
T ss_pred CCeEEEEEeeeeEEEeCcEEecCCCCEEEEecCCCEEEeeEEEcCC-----CC----CCCCeEEecCCceEEEEeeEEec
Confidence 4457888889999999998888778899999999999999987421 10 11345777754 33677776666
Q ss_pred cceeEEEe
Q 011125 278 AAIGVLLR 285 (493)
Q Consensus 278 a~~GI~v~ 285 (493)
+.-+|.+.
T Consensus 401 gDD~Iaik 408 (608)
T 2uvf_A 401 GDDCINFA 408 (608)
T ss_dssp SSCSEEEE
T ss_pred CCceEEec
Confidence 66666553
No 40
>1idk_A Pectin lyase A; signal, glycoprotein, multigene family; 1.93A {Aspergillus niger} SCOP: b.80.1.2 PDB: 1idj_A
Probab=96.57 E-value=0.18 Score=51.72 Aligned_cols=47 Identities=13% Similarity=0.168 Sum_probs=36.4
Q ss_pred eecceEEeeeecEEEeeeEEeeeccCcEE--EeeeeeEEEeeeeeeecc
Q 011125 199 RGGGIFVIDSARIRINNCFFLHFTTQGIL--VQRGHETFISSCFLGQRS 245 (493)
Q Consensus 199 ~ggGI~v~nSq~v~I~NC~~~~fnTDGI~--V~~s~~v~Isns~ig~~~ 245 (493)
.+++|.+..++.++||.|.+....+.-+. .+.+..+.|++|.|.++.
T Consensus 152 g~DaI~i~~s~nVwIDHcs~s~~~d~~~~~g~~~s~~VTISnn~f~~~~ 200 (359)
T 1idk_A 152 GGDAITLDDCDLVWIDHVTTARIGRQHYVLGTSADNRVSLTNNYIDGVS 200 (359)
T ss_dssp SCCSEEECSCEEEEEESCEEEEESSCSEEECCCTTCEEEEESCEEECBC
T ss_pred cCCceeecCCCcEEEEeeEeecCCCCcEEecccCcceEEEECcEecCCc
Confidence 45788888888899999999877544444 356789999999998665
No 41
>1ogo_X Dextranase; hydrolase, dextran degradation, glycosidase; HET: BGC GLC; 1.65A {Penicillium minioluteum} SCOP: b.133.1.1 b.80.1.10 PDB: 1ogm_X*
Probab=96.55 E-value=0.075 Score=57.75 Aligned_cols=125 Identities=13% Similarity=0.152 Sum_probs=77.4
Q ss_pred ceE-EEecCceEEeeccEEeCCCCcceeE-eCCeEEecC-CC--------C---CCcceEEec------cCCCccccccc
Q 011125 103 GVI-IDFQGGNYKISKPIRFPPGVGNVVV-QGGTLRASD-TF--------P---SDRHLIELW------APNSQKLKRTD 162 (493)
Q Consensus 103 ga~-V~lPgGTYlIs~pI~lp~g~Gni~i-~~GTLkAs~-~F--------p---gd~~lI~~~------~~n~~~i~G~~ 162 (493)
+.+ +||++|.++. ++|.+..+. ++.+ ..|+|...- .| + .....|.+. ......++|-
T Consensus 264 nvt~L~L~~GA~l~-g~i~~~~~~-nv~ItG~GtIDG~G~~ww~~~~~~~~~~~~rp~~i~~~~~~~~~~c~NV~I~Gi- 340 (574)
T 1ogo_X 264 NTYWVYLAPGAYVK-GAIEYFTKQ-NFYATGHGILSGENYVYQANAGDNYIAVKSDSTSLRMWWHNNLGGGQTWYCVGP- 340 (574)
T ss_dssp TCCEEEECTTEEEE-SCEEECCSS-CEEEESSCEEECTTSCTTCBTTTTTBSCCCTTTBCCSEEECSCCSSEEEEEESC-
T ss_pred CCceEEecCCcEEE-ccEEEeCce-eEEEEeCEEEeCCCcccccccccccccccCCcceEEEEeccccCCceeEEEECe-
Confidence 456 9999999987 689888654 6764 448885541 11 1 011122222 2222233332
Q ss_pred ceeecc-ceeecccccCcCCccccce--eeeeeEeecc--eeecceEEeeeecEEEeeeEEeeeccCcEEEeeeeeEEEe
Q 011125 163 AIKIDR-NYVFNDVKDQTARTYYEDI--TFRDVLFDSG--FRGGGIFVIDSARIRINNCFFLHFTTQGILVQRGHETFIS 237 (493)
Q Consensus 163 ~GtlDg-~w~~~c~~s~~~~~~~~~I--T~~~lv~D~n--~~ggGI~v~nSq~v~I~NC~~~~fnTDGI~V~~s~~v~Is 237 (493)
...+. .|.+. -..|+.+ +++++-.+.. ...+||.+- +.+.|.||.+. -++|.|.+.+ +.+.|+
T Consensus 341 -ti~NSp~w~i~-------~~~c~nV~~~I~nv~i~~~~~~nTDGIDi~--~NV~I~nc~I~-~gDDcIaIks-~NI~I~ 408 (574)
T 1ogo_X 341 -TINAPPFNTMD-------FNGNSGISSQISDYKQVGAFFFQTDGPEIY--PNSVVHDVFWH-VNDDAIKIYY-SGASVS 408 (574)
T ss_dssp -EEECCSSCSEE-------ECSSSCEEEEEEEEEEECCCSTTCCCCBCC--TTCEEEEEEEE-ESSCSEECCS-TTCEEE
T ss_pred -EEECCCCcEEe-------ecCCCChhhEEEeeEeeCCCCCCCccCccc--CCEEEEeeEEE-CCCCEEEECC-ccEEEE
Confidence 11221 33211 2467888 8888765542 226788776 78999999775 5799999987 899999
Q ss_pred eeeee
Q 011125 238 SCFLG 242 (493)
Q Consensus 238 ns~ig 242 (493)
||.+.
T Consensus 409 nc~i~ 413 (574)
T 1ogo_X 409 RATIW 413 (574)
T ss_dssp EEEEE
T ss_pred eEEEE
Confidence 99975
No 42
>2nsp_A Pectinesterase A; michaelis complex, hydrolase; HET: M8C ADA; 1.70A {Erwinia chrysanthemi} PDB: 2nst_A* 2nt6_A* 2nt9_A* 2ntp_A* 2ntb_A* 2ntq_A* 1qjv_A
Probab=96.51 E-value=0.12 Score=52.71 Aligned_cols=35 Identities=17% Similarity=0.421 Sum_probs=28.5
Q ss_pred eeeecEEEeeeEEeeeccCcEEEeeeeeEEEeeeeee
Q 011125 206 IDSARIRINNCFFLHFTTQGILVQRGHETFISSCFLG 242 (493)
Q Consensus 206 ~nSq~v~I~NC~~~~fnTDGI~V~~s~~v~Isns~ig 242 (493)
..+.+..|.||.|.++- |.+.++.+ ..+.++|+|.
T Consensus 137 v~~d~~~f~~c~f~G~Q-DTLy~~~g-r~~~~~c~I~ 171 (342)
T 2nsp_A 137 KSGDRAYFKDVSLVGYQ-ATLYVSGG-RSFFSDCRIS 171 (342)
T ss_dssp TTCBSEEEEEEEEECST-TCEEECSS-EEEEESCEEE
T ss_pred eccCcEEEEeeEEeccc-ceEEECCC-CEEEEcCEEE
Confidence 45777999999999874 56888866 5888999997
No 43
>1dbg_A Chondroitinase B; beta helix, polysaccharide lyase, dematan sulfate; HET: MAN RAM GCU MXY G4D BGC; 1.70A {Pedobacter heparinus} SCOP: b.80.1.4 PDB: 1dbo_A* 1ofl_A* 1ofm_A*
Probab=96.48 E-value=0.019 Score=61.53 Aligned_cols=150 Identities=13% Similarity=0.125 Sum_probs=93.0
Q ss_pred eecEEEeeeEEeeecc-CcEEEe--------eeeeEEEeeeeeeeccccCCCCCccccceE-EEEEcc--------CCce
Q 011125 208 SARIRINNCFFLHFTT-QGILVQ--------RGHETFISSCFLGQRSTVGGDPGEKGFSGT-AIDLAS--------NDNA 269 (493)
Q Consensus 208 Sq~v~I~NC~~~~fnT-DGI~V~--------~s~~v~Isns~ig~~~t~ggd~~e~~f~gt-GI~l~g--------Nd~~ 269 (493)
+.+..|.||.+.++.. +.+.++ .++..+|.+|.|..-... | ... .|- ||++.+ +++.
T Consensus 125 G~~~~I~nn~I~~~~~gd~i~i~~~~~~~~l~g~~n~I~~N~I~Gk~~~-G-~~i---~gnngI~l~~~~~~~~~~~~~~ 199 (506)
T 1dbg_A 125 GSYNRITACVFDCFDEANSAYITTSLTEDGKVPQHCRIDHCSFTDKITF-D-QVI---NLNNTARAIKDGSVGGPGMYHR 199 (506)
T ss_dssp SSSCEEESCEEESCCSSCSCSEEECCCTTCCCCCSCEEESCEEECCCSS-S-CSE---EECSSCCCSCCCSCCCCCCCCE
T ss_pred cCCeEEEeeEEEcCCCCceeeEeecccceeeeccccEEECcEEECCcCc-c-eEE---ecCceeEeccCcccccccCCeE
Confidence 4567888888887733 125565 566778888888742211 1 000 011 344443 3445
Q ss_pred eeeEEEeec------ceeEEEec-----ceeEEEeeEEecccccccceeEEEec---cccccceecccccccceeeeeCC
Q 011125 270 ITDVTIFSA------AIGVLLRG-----QANIVTRVHCYNKATAFGGIGILVKL---ADAALTRIDNCYLDYTGIVLEDP 335 (493)
Q Consensus 270 ItD~~i~sa------~~GI~v~g-----q~~ii~gvh~yN~~t~~GG~Gi~~~~---~~~~~~rI~ncyldy~~iv~~d~ 335 (493)
|.+..|.+- ..++.++- +.++++++.|+++. ||..++... .-+..|++.+| .+ +|.+++.
T Consensus 200 I~nN~f~~~~~~~N~~e~iR~G~h~m~s~~~~VenN~f~~~~---gg~aim~skS~~n~i~~N~~~~~--~g-gi~l~~~ 273 (506)
T 1dbg_A 200 VDHCFFSNPQKPGNAGGGIRIGYYRNDIGRCLVDSNLFMRQD---SEAEIITSKSQENVYYGNTYLNC--QG-TMNFRHG 273 (506)
T ss_dssp EESCEEEECCCSSSCCCSEEECSSTTCBCCCEEESCEEEEEC---SSSEEEEEESBSCEEESCEEESC--SS-EEEEEEC
T ss_pred EeCcEEcccccCCCccccEEEEEEecccCCcEEECCEEEecc---CcEEEEEEecCCEEEECCEEEcc--cC-cEEEeec
Confidence 555555432 23444442 36688889998874 566665443 23788888888 66 6888888
Q ss_pred eeEEEEceeeeecc------eeEEEeecceeeeeEEEeeeccCC
Q 011125 336 VQVHVTNGFFLGDA------NIVLKSIKGRISGLTIVENMFNGS 373 (493)
Q Consensus 336 ~~~~It~~~flg~a------~v~l~~~~~~~~g~~I~~N~~~g~ 373 (493)
..-.|.+|.|+|.+ -|.++.+ +-.|.+|.|.+.
T Consensus 274 ~~s~I~~N~f~gN~~~~~~~Gi~i~~~-----~~~I~nN~f~~~ 312 (506)
T 1dbg_A 274 DHQVAINNFYIGNDQRFGYGGMFVWGS-----RHVIACNYFELS 312 (506)
T ss_dssp SSCEEESCEEEECSSSSCBCCEEECSB-----SCEEESCEEEES
T ss_pred CccEEECCEEECCcCccCceEEEEECC-----CCEEECCEEECC
Confidence 77789999999864 3455444 348888888887
No 44
>3zsc_A Pectate trisaccharide-lyase; hydrolase; HET: ADA AQA; 1.94A {Thermotoga maritima}
Probab=96.46 E-value=0.19 Score=51.31 Aligned_cols=48 Identities=19% Similarity=0.105 Sum_probs=40.4
Q ss_pred eecceEEeeeecEEEeeeEEeeeccCc-EEEe-eeeeEEEeeeeeeecccc
Q 011125 199 RGGGIFVIDSARIRINNCFFLHFTTQG-ILVQ-RGHETFISSCFLGQRSTV 247 (493)
Q Consensus 199 ~ggGI~v~nSq~v~I~NC~~~~fnTDG-I~V~-~s~~v~Isns~ig~~~t~ 247 (493)
.+++|.+..++.++||.|.+... .|| |.+. .+..+.|++|.|.+|...
T Consensus 115 ~~DaI~i~~s~nVWIDHcs~s~~-~Dg~idi~~~s~~vTISnn~f~~h~k~ 164 (340)
T 3zsc_A 115 DFDYINVENSHHIWIDHITFVNG-NDGAVDIKKYSNYITVSWNKFVDHDKV 164 (340)
T ss_dssp CCCSEEEESCEEEEEESCEEESC-SSCSEEEETTCEEEEEESCEEESCSBC
T ss_pred CCCeEEEecCCcEEEEeeeeccC-CccceEEecCCceEEEECcEeccCcee
Confidence 56889999999999999999876 555 7776 489999999999988653
No 45
>3uw0_A Pectinesterase; right-handed beta-helix, carbohydrate esterase, hydrolase; 3.50A {Yersinia enterocolitica subsp}
Probab=96.43 E-value=0.17 Score=52.01 Aligned_cols=40 Identities=13% Similarity=0.409 Sum_probs=31.5
Q ss_pred ceEEe-eeecEEEeeeEEeeeccCcEEEeeeeeEEEeeeeee
Q 011125 202 GIFVI-DSARIRINNCFFLHFTTQGILVQRGHETFISSCFLG 242 (493)
Q Consensus 202 GI~v~-nSq~v~I~NC~~~~fnTDGI~V~~s~~v~Isns~ig 242 (493)
+|++. ++.+..|.||.|.++- |.+.++....-+.++|+|.
T Consensus 158 Al~v~~~~D~~~f~~C~f~G~Q-DTLy~~~~gr~yf~~c~I~ 198 (364)
T 3uw0_A 158 ALLLAENSDKARFKAVKLEGYQ-DTLYSKTGSRSYFSDCEIS 198 (364)
T ss_dssp SEEECTTCEEEEEEEEEEECSB-SCEEECTTCEEEEESCEEE
T ss_pred EEEEecCCCeEEEEeeEEEecc-cceEeCCCCCEEEEcCEEE
Confidence 44443 4778999999999884 8898885557889999997
No 46
>1pxz_A Major pollen allergen JUN A 1; parallel beta-helix, cedar pollen; 1.70A {Juniperus ashei} SCOP: b.80.1.1
Probab=96.19 E-value=0.037 Score=56.43 Aligned_cols=133 Identities=16% Similarity=0.248 Sum_probs=90.9
Q ss_pred ceeEEEeccee-EEEeeEEeccc------------------ccccceeEEEeccccccceecccccccc--eee-e-eCC
Q 011125 279 AIGVLLRGQAN-IVTRVHCYNKA------------------TAFGGIGILVKLADAALTRIDNCYLDYT--GIV-L-EDP 335 (493)
Q Consensus 279 ~~GI~v~gq~~-ii~gvh~yN~~------------------t~~GG~Gi~~~~~~~~~~rI~ncyldy~--~iv-~-~d~ 335 (493)
..|+.+.+..+ ||+++|+.++. ...+|-||.+. +.+..+|+.|.|+.. +++ + +..
T Consensus 105 G~gi~i~~a~NVIIrnl~i~~~~~~~~~~I~~~~~~~~g~~~~~~~DaI~i~--~s~nVwIDHcs~s~~~Dg~id~~~~s 182 (346)
T 1pxz_A 105 GPCLFMRKVSHVILHSLHIHGCNTSVLGDVLVSESIGVEPVHAQDGDAITMR--NVTNAWIDHNSLSDCSDGLIDVTLGS 182 (346)
T ss_dssp SCCEEEESCEEEEEESCEEECCCCCCSEEEEEETTTEEEEECCCCCCSEEEE--SCEEEEEESCEEECCSSEEEEEESSC
T ss_pred cceEEEEccCCEEEEeeEEEeeccCCCceEEeccCcccccccCCCCCEEEEe--cCceEEEEeeEEecCCCCcEeeccCc
Confidence 35666665544 77889988763 23456677665 468899999988776 553 3 678
Q ss_pred eeEEEEceeeeecceeEEEeec-----ceeeeeEEEeeec-cCCCCCCcceEeecCceeeeeeEEEeeecccceeeEeee
Q 011125 336 VQVHVTNGFFLGDANIVLKSIK-----GRISGLTIVENMF-NGSPARNVPIIKLDGEFSNIDQVVIERNNVNGMSLKSTA 409 (493)
Q Consensus 336 ~~~~It~~~flg~a~v~l~~~~-----~~~~g~~I~~N~~-~g~~~~gv~iv~~~g~f~~i~~v~vd~n~~~gm~~~~t~ 409 (493)
.++.|++|.|..-....|-... ..-.-+++.+|.| .+. ....|-+++ |.+..+.+++.+ +...++..+ .-
T Consensus 183 ~~vTISnn~f~~H~k~~l~G~sd~~~~d~~~~vT~~~N~f~~~~-~~R~Pr~r~-g~~hv~NN~~~~-~~~~~i~~~-~~ 258 (346)
T 1pxz_A 183 TGITISNNHFFNHHKVMLLGHDDTYDDDKSMKVTVAFNQFGPNA-GQRMPRARY-GLVHVANNNYDP-WNIYAIGGS-SN 258 (346)
T ss_dssp EEEEEESCEEESEEEEEEESCCSSCGGGGGCEEEEESCEECSSE-EECTTEEES-SEEEEESCEECC-CSSCSEEEE-SC
T ss_pred ceEEEEeeEEecCCceeEECCCCccccCCceEEEEEeeEEeCCc-cccCccEec-ceEEEEeeEEEc-ccceEEecc-CC
Confidence 9999999999986666665421 1123688999999 666 333355654 888888888865 333555543 24
Q ss_pred eEEEeecc
Q 011125 410 GKLSVAGN 417 (493)
Q Consensus 410 ~r~~~~gn 417 (493)
+++.++||
T Consensus 259 ~~i~~egN 266 (346)
T 1pxz_A 259 PTILSEGN 266 (346)
T ss_dssp CEEEEESC
T ss_pred ceEEEECC
Confidence 67888888
No 47
>1pxz_A Major pollen allergen JUN A 1; parallel beta-helix, cedar pollen; 1.70A {Juniperus ashei} SCOP: b.80.1.1
Probab=96.16 E-value=0.057 Score=55.09 Aligned_cols=48 Identities=15% Similarity=0.115 Sum_probs=40.2
Q ss_pred ceeecceEEeeeecEEEeeeEEeeeccCcE-EE-eeeeeEEEeeeeeeecc
Q 011125 197 GFRGGGIFVIDSARIRINNCFFLHFTTQGI-LV-QRGHETFISSCFLGQRS 245 (493)
Q Consensus 197 n~~ggGI~v~nSq~v~I~NC~~~~fnTDGI-~V-~~s~~v~Isns~ig~~~ 245 (493)
...+++|.+..++.++||.|.+.. +.||+ .+ ..++.+.|++|.|.+|.
T Consensus 147 ~~~~DaI~i~~s~nVwIDHcs~s~-~~Dg~id~~~~s~~vTISnn~f~~H~ 196 (346)
T 1pxz_A 147 AQDGDAITMRNVTNAWIDHNSLSD-CSDGLIDVTLGSTGITISNNHFFNHH 196 (346)
T ss_dssp CCCCCSEEEESCEEEEEESCEEEC-CSSEEEEEESSCEEEEEESCEEESEE
T ss_pred CCCCCEEEEecCceEEEEeeEEec-CCCCcEeeccCcceEEEEeeEEecCC
Confidence 356789999999999999999875 57887 45 68999999999998764
No 48
>1k5c_A Endopolygalacturonase; beta helical structure, glycoside hydrolase, silver-LEAF IND substance, hydrolase; HET: NAG; 0.96A {Chondrostereum purpureum} SCOP: b.80.1.3 PDB: 1kcc_A* 1kcd_A*
Probab=96.01 E-value=0.16 Score=51.27 Aligned_cols=91 Identities=12% Similarity=0.109 Sum_probs=60.5
Q ss_pred ceEEeeeecEEEeeeEEeeeccCcEEEeeeee-EEEeeeeeeeccccCCCCC-ccccceEEEEEccCCc-eeeeEEEeec
Q 011125 202 GIFVIDSARIRINNCFFLHFTTQGILVQRGHE-TFISSCFLGQRSTVGGDPG-EKGFSGTAIDLASNDN-AITDVTIFSA 278 (493)
Q Consensus 202 GI~v~nSq~v~I~NC~~~~fnTDGI~V~~s~~-v~Isns~ig~~~t~ggd~~-e~~f~gtGI~l~gNd~-~ItD~~i~sa 278 (493)
.+++.+++ +.|.+..+....-..|++..|+. +.|++.+|-..... ... -.|.+ ||++ +..+ .|.|+.|..+
T Consensus 99 ~i~~~~~~-v~i~giti~nsp~~~i~i~~~~n~v~i~~v~I~~~~~d--~~~~~~NtD--Gidi-~s~nV~I~n~~i~~g 172 (335)
T 1k5c_A 99 PFLKIKGS-GTYKKFEVLNSPAQAISVGPTDAHLTLDGITVDDFAGD--TKNLGHNTD--GFDV-SANNVTIQNCIVKNQ 172 (335)
T ss_dssp CSEEEEEE-EEEESCEEESCSSCCEEEEEEEEEEEEESCEEECGGGG--GGGCCCSCC--SEEE-ECSSEEEESCEEESS
T ss_pred EEEEeceE-EEEEEEEEECCCcceEEEEccCCeEEEEEEEEECCCCc--ccccCCCCC--eEcc-cCCeEEEEeeEEEcC
Confidence 35556666 67777766666788999999999 99999999643210 000 12233 4677 5444 8888888888
Q ss_pred ceeEEEeccee-EEEeeEEec
Q 011125 279 AIGVLLRGQAN-IVTRVHCYN 298 (493)
Q Consensus 279 ~~GI~v~gq~~-ii~gvh~yN 298 (493)
.-.|.+....+ +|++++|+.
T Consensus 173 DDcIaiksg~nI~i~n~~~~~ 193 (335)
T 1k5c_A 173 DDCIAINDGNNIRFENNQCSG 193 (335)
T ss_dssp SCSEEEEEEEEEEEESCEEES
T ss_pred CCEEEeeCCeeEEEEEEEEEC
Confidence 88888864333 566666664
No 49
>1qcx_A Pectin lyase B; beta-helix protein, plant cell WALL; 1.70A {Aspergillus niger} SCOP: b.80.1.2
Probab=95.46 E-value=1.1 Score=45.77 Aligned_cols=47 Identities=26% Similarity=0.264 Sum_probs=35.0
Q ss_pred eecceEEeeeecEEEeeeEEeeeccCcEE--EeeeeeEEEeeeeeeecc
Q 011125 199 RGGGIFVIDSARIRINNCFFLHFTTQGIL--VQRGHETFISSCFLGQRS 245 (493)
Q Consensus 199 ~ggGI~v~nSq~v~I~NC~~~~fnTDGI~--V~~s~~v~Isns~ig~~~ 245 (493)
.+++|.+..++.++||.|.+....+.-+. .+.++.+.|++|.|.++.
T Consensus 152 ~~DaI~i~~s~nvwIDHcs~s~~~d~~~~~~~~~s~~vTISnn~f~~~~ 200 (359)
T 1qcx_A 152 GGDAITVDDSDLVWIDHVTTARIGRQHIVLGTSADNRVTISYSLIDGRS 200 (359)
T ss_dssp SCCSEEEESCCCEEEESCEEEEESSCSEEECSSCCEEEEEESCEEECBC
T ss_pred cCceeEecCCceEEEEeeEeeccCcCceeecccccccEEEECcEecCCc
Confidence 45788888888899999988866433332 346889999999998654
No 50
>1idk_A Pectin lyase A; signal, glycoprotein, multigene family; 1.93A {Aspergillus niger} SCOP: b.80.1.2 PDB: 1idj_A
Probab=94.93 E-value=0.13 Score=52.78 Aligned_cols=129 Identities=18% Similarity=0.256 Sum_probs=87.6
Q ss_pred eEEEe-ccee-EEEeeEEecccc--cccceeEEEeccccccceecccccccc--eee---eeCCeeEEEEceeeeecc--
Q 011125 281 GVLLR-GQAN-IVTRVHCYNKAT--AFGGIGILVKLADAALTRIDNCYLDYT--GIV---LEDPVQVHVTNGFFLGDA-- 349 (493)
Q Consensus 281 GI~v~-gq~~-ii~gvh~yN~~t--~~GG~Gi~~~~~~~~~~rI~ncyldy~--~iv---~~d~~~~~It~~~flg~a-- 349 (493)
|+.+. +..| ||+++|+.+... ..||-+|.+. +.+.-+|+.|-|.+. ++. .+...+|.|++|.|.+..
T Consensus 125 gl~i~~~a~NVIIrnL~i~~~~~~~~~g~DaI~i~--~s~nVwIDHcs~s~~~d~~~~~g~~~s~~VTISnn~f~~~~~~ 202 (359)
T 1idk_A 125 GLRIVSGAENIIIQNIAVTDINPKYVWGGDAITLD--DCDLVWIDHVTTARIGRQHYVLGTSADNRVSLTNNYIDGVSDY 202 (359)
T ss_dssp CEEECTTCEEEEEESCEEEEECTTEETSCCSEEEC--SCEEEEEESCEEEEESSCSEEECCCTTCEEEEESCEEECBCSC
T ss_pred eEEEecCCCcEEEeCeEEEcccccccccCCceeec--CCCcEEEEeeEeecCCCCcEEecccCcceEEEECcEecCCccc
Confidence 56675 3444 889999988532 3577888876 578999999977654 222 356789999999998643
Q ss_pred ----------eeEEEeecceeeeeEEEeeeccCCCCCCcceEeecCceeeeeeEEEeeecccceeeEeeeeEEEeecc
Q 011125 350 ----------NIVLKSIKGRISGLTIVENMFNGSPARNVPIIKLDGEFSNIDQVVIERNNVNGMSLKSTAGKLSVAGN 417 (493)
Q Consensus 350 ----------~v~l~~~~~~~~g~~I~~N~~~g~~~~gv~iv~~~g~f~~i~~v~vd~n~~~gm~~~~t~~r~~~~gn 417 (493)
...|-.. =..+.+.+|.|.+. ..-.|-+++...+..+++++-+. .-.++..+. -+++.+++|
T Consensus 203 s~~~~G~h~~~~~L~G~---sd~vT~hhN~f~~~-~~R~Pr~r~g~~~hv~NN~~~n~-~~~~i~~~~-~~~i~~e~N 274 (359)
T 1idk_A 203 SATCDGYHYWAIYLDGD---ADLVTMKGNYIYHT-SGRSPKVQDNTLLHAVNNYWYDI-SGHAFEIGE-GGYVLAEGN 274 (359)
T ss_dssp BTTSSSBBSCCEEECCS---SCEEEEESCEEESB-CSCTTEECTTCEEEEESCEEEEE-EEEEEEECT-TCEEEEESC
T ss_pred ccccCccccceEEEEec---CCCeEEEceEeecC-cccCccccCCceEEEECCEEecc-cceEEeccC-CcEEEEEcc
Confidence 2333222 13789999999977 44447777655688888877653 334555432 367888888
No 51
>1x0c_A Isopullulanase; glycoside hydrolase family 49, glycoprotein, hydro; HET: NAG; 1.70A {Aspergillus niger} PDB: 1wmr_A* 2z8g_A*
Probab=94.91 E-value=0.15 Score=55.05 Aligned_cols=128 Identities=10% Similarity=0.106 Sum_probs=74.2
Q ss_pred CceE-EEecCceEEeeccEEeCCCCcceeE-eCCeEEecC-CC--------C----CCcceEEe------ccCCCccccc
Q 011125 102 GGVI-IDFQGGNYKISKPIRFPPGVGNVVV-QGGTLRASD-TF--------P----SDRHLIEL------WAPNSQKLKR 160 (493)
Q Consensus 102 Gga~-V~lPgGTYlIs~pI~lp~g~Gni~i-~~GTLkAs~-~F--------p----gd~~lI~~------~~~n~~~i~G 160 (493)
.+.+ +||++|.++. +++.+....-++.+ ..|+|...- .| + .....|++ .......++|
T Consensus 221 s~~~~L~l~~GA~L~-gs~~~~~~~~nv~ItG~GtIDG~G~~ww~~~~~~~~~~~~~rp~~i~~~~~~~~~~c~nV~I~G 299 (549)
T 1x0c_A 221 SSVTWVYFAPGAYVK-GAVEFLSTASEVKASGHGVLSGEQYVWYADPDEGYQKASGANNNGLRMWRGTLGNSSQTFVLNG 299 (549)
T ss_dssp TTCCEEEECTTEEEE-SCEEECCCSSEEEEESSCEEECTTSCTTEEGGGTTEECGGGCSCCCCSEEEECCSSCEEEEEES
T ss_pred CCCCeEecCCCCEEE-EEEEEecCceeEEEEeeEEEECCCceecccCcccccccccCCCceEEEeeccccCCceEEEEEC
Confidence 4566 9999999976 68888743336664 447876542 11 0 00112222 2222222332
Q ss_pred ccceeecc-ceeecccccCcCCccc-cc--eeeeeeEeecc--eeecceEEeeeecEEEeeeEEeeeccCcEEEeeeeeE
Q 011125 161 TDAIKIDR-NYVFNDVKDQTARTYY-ED--ITFRDVLFDSG--FRGGGIFVIDSARIRINNCFFLHFTTQGILVQRGHET 234 (493)
Q Consensus 161 ~~~GtlDg-~w~~~c~~s~~~~~~~-~~--IT~~~lv~D~n--~~ggGI~v~nSq~v~I~NC~~~~fnTDGI~V~~s~~v 234 (493)
- -..+. .|...- ..+| .. +++.++-.+.. ..-+|+.+. +.+.|.||.+. -++|.|.+.+ +.+
T Consensus 300 i--ti~Nsp~w~i~i------~~~~~~ni~V~I~n~~i~~~~~~NTDGidi~--~nV~I~n~~i~-~gDDcIaIks-~NI 367 (549)
T 1x0c_A 300 V--TVSAPPFNSMDW------SGNSLDLITCRVDDYKQVGAFYGQTDGLEMY--PGTILQDVFYH-TDDDGLKMYY-SNV 367 (549)
T ss_dssp C--EEECCSSCSEEE------ECSCGGGEEEEEEEEEEECCCBTTCCCCBCC--TTCEEEEEEEE-ESSCCEECCS-SSE
T ss_pred c--EEECCCceeEEe------eccCCCCCeEEEEeeEeEcCCCCCCCccccc--CCEEEEeeEEe-CCCCEEEECC-CCE
Confidence 1 11111 332110 0133 46 67777665542 124777776 77999999875 4799999987 899
Q ss_pred EEeeeeee
Q 011125 235 FISSCFLG 242 (493)
Q Consensus 235 ~Isns~ig 242 (493)
.|+||.+.
T Consensus 368 ~I~n~~~~ 375 (549)
T 1x0c_A 368 TARNIVMW 375 (549)
T ss_dssp EEEEEEEE
T ss_pred EEEeeEEE
Confidence 99999985
No 52
>1qcx_A Pectin lyase B; beta-helix protein, plant cell WALL; 1.70A {Aspergillus niger} SCOP: b.80.1.2
Probab=94.55 E-value=0.19 Score=51.53 Aligned_cols=129 Identities=19% Similarity=0.303 Sum_probs=88.8
Q ss_pred eEEEe-ccee-EEEeeEEecccc--cccceeEEEeccccccceecccccccc--e-ee--eeCCeeEEEEceeeeecc--
Q 011125 281 GVLLR-GQAN-IVTRVHCYNKAT--AFGGIGILVKLADAALTRIDNCYLDYT--G-IV--LEDPVQVHVTNGFFLGDA-- 349 (493)
Q Consensus 281 GI~v~-gq~~-ii~gvh~yN~~t--~~GG~Gi~~~~~~~~~~rI~ncyldy~--~-iv--~~d~~~~~It~~~flg~a-- 349 (493)
|+.+. +..| ||+++|+.+... ..+|-+|.+. +.+.-+|+.|.|.+. + ++ .+...+|.|++|.|.+.-
T Consensus 125 gl~i~~~a~NVIIrnl~i~~~~~~~~~~~DaI~i~--~s~nvwIDHcs~s~~~d~~~~~~~~~s~~vTISnn~f~~~~~~ 202 (359)
T 1qcx_A 125 GLRVVSGAKNVIIQNIAVTDINPKYVWGGDAITVD--DSDLVWIDHVTTARIGRQHIVLGTSADNRVTISYSLIDGRSDY 202 (359)
T ss_dssp CEEEETTCCCEEEESCEEEEECTTEETSCCSEEEE--SCCCEEEESCEEEEESSCSEEECSSCCEEEEEESCEEECBCSS
T ss_pred eEEEecCCCCEEEeCcEEEecCCcccccCceeEec--CCceEEEEeeEeeccCcCceeecccccccEEEECcEecCCccc
Confidence 56665 4333 889999988654 3577888876 467889999977765 2 21 446789999999998642
Q ss_pred ----------eeEEEeecceeeeeEEEeeeccCCCCCCcceEeecCceeeeeeEEEeeecccceeeEeeeeEEEeecc
Q 011125 350 ----------NIVLKSIKGRISGLTIVENMFNGSPARNVPIIKLDGEFSNIDQVVIERNNVNGMSLKSTAGKLSVAGN 417 (493)
Q Consensus 350 ----------~v~l~~~~~~~~g~~I~~N~~~g~~~~gv~iv~~~g~f~~i~~v~vd~n~~~gm~~~~t~~r~~~~gn 417 (493)
...|-.. =..+.+.+|+|.+. ....|.+++.+.++.+.+++-+. .-.++..+ .-+++.+++|
T Consensus 203 s~~~~G~H~~~~~l~G~---sd~vT~~~N~f~~~-~~R~Pr~r~~~~~hv~NN~~~n~-~~~a~~~~-~~~~i~~e~N 274 (359)
T 1qcx_A 203 SATCNGHHYWGVYLDGS---NDMVTLKGNYFYNL-SGRMPKVQGNTLLHAVNNLFHNF-DGHAFEIG-TGGYVLAEGN 274 (359)
T ss_dssp BTTSSSBBSCCEEECCS---SEEEEEESCEEESB-CSCTTEECSSEEEEEESCEEEEE-EEEEEEEC-TTEEEEEESC
T ss_pred cccCcccccceeEEecC---CCCeehcccEeccC-cccCceecCCceEEEEccEEECc-cCeEEecC-CCceEEEEee
Confidence 2233221 13689999999988 66668888877788888887653 23344432 2467888888
No 53
>1pcl_A Pectate lyase E; lyase (acting on polysaccharides); 2.20A {Erwinia chrysanthemi} SCOP: b.80.1.1
Probab=94.25 E-value=0.34 Score=49.61 Aligned_cols=132 Identities=14% Similarity=0.230 Sum_probs=85.5
Q ss_pred eEEEeccee-EEEeeEEecccc---------c--ccceeEEEeccccccceecccccccc-------------------e
Q 011125 281 GVLLRGQAN-IVTRVHCYNKAT---------A--FGGIGILVKLADAALTRIDNCYLDYT-------------------G 329 (493)
Q Consensus 281 GI~v~gq~~-ii~gvh~yN~~t---------~--~GG~Gi~~~~~~~~~~rI~ncyldy~-------------------~ 329 (493)
|+.+.+..| ||+++||.+... + ..|-+|.+. +.+.-+|+.|.+... +
T Consensus 97 gl~i~~~~NVIIrnl~i~~~~~~~p~~~~~~g~~~~~DaI~i~--~s~nVWIDH~s~s~~~~~d~~~~~~~G~~~~~~Dg 174 (355)
T 1pcl_A 97 SLVIKGVKNVILRNLYIETPVDVAPHYESGDGWNAEWDAAVID--NSTNVWVDHVTISDGSFTDDKYTTKDGEKYVQHDG 174 (355)
T ss_pred EEEEecCCeEEEeeeEEEcCcccccccccccCccccCceEEec--CCCcEEEEeeEEeccccCccccccccCcccccccc
Confidence 666666545 789999986421 1 235566664 578999999977642 2
Q ss_pred e--eeeCCeeEEEEceeeeecceeEEEeecce-------eeeeEEEeeeccCCCCCCcceEeecCceeeeeeEEEeeec-
Q 011125 330 I--VLEDPVQVHVTNGFFLGDANIVLKSIKGR-------ISGLTIVENMFNGSPARNVPIIKLDGEFSNIDQVVIERNN- 399 (493)
Q Consensus 330 i--v~~d~~~~~It~~~flg~a~v~l~~~~~~-------~~g~~I~~N~~~g~~~~gv~iv~~~g~f~~i~~v~vd~n~- 399 (493)
. +.++.-.|.|++|.|.+-....|-...-. -..+++.+|.|.+. ..-.|-+++ |.+..+.+++.+..+
T Consensus 175 l~Di~~~s~~VTiS~n~f~~h~k~~LiG~sd~~~~~d~g~~~vT~hhN~f~~~-~~R~PrvR~-G~~Hv~NN~~~~~~~~ 252 (355)
T 1pcl_A 175 ALDIKKGSDYVTISYSRFELHDKTILIGHSDSNGSQDSGKLRVTFHNNVFDRV-TERAPRVRF-GSIHAYNNVYLGDVKH 252 (355)
T ss_pred ceeeecCCCcEEEEeeEEcCCCceEEeCCCCCCcccccCcceEEEECcEEeCC-cccCCceec-ceEEEEcceEEcccCC
Confidence 1 33467899999999999777766654211 22599999999877 333455554 778888888764321
Q ss_pred -----ccceeeEeeeeEEEeecc
Q 011125 400 -----VNGMSLKSTAGKLSVAGN 417 (493)
Q Consensus 400 -----~~gm~~~~t~~r~~~~gn 417 (493)
..++.. ..-+++.+++|
T Consensus 253 ~~~~~~ya~g~-~~~~~i~~e~N 274 (355)
T 1pcl_A 253 SVYPYLYSFGL-GTSGSILSESN 274 (355)
T ss_pred CccccceEecC-CCCcEEEEEcc
Confidence 122221 22456788888
No 54
>2qy1_A Pectate lyase II; GAG lyase; 1.90A {Xanthomonas campestris PV} PDB: 2qxz_A 2qx3_A
Probab=93.97 E-value=0.32 Score=49.15 Aligned_cols=133 Identities=14% Similarity=0.171 Sum_probs=90.2
Q ss_pred eEEEe-ccee-EEEeeEEecccccccceeEEEecc---ccccceecccccccc-------------ee--eeeCCeeEEE
Q 011125 281 GVLLR-GQAN-IVTRVHCYNKATAFGGIGILVKLA---DAALTRIDNCYLDYT-------------GI--VLEDPVQVHV 340 (493)
Q Consensus 281 GI~v~-gq~~-ii~gvh~yN~~t~~GG~Gi~~~~~---~~~~~rI~ncyldy~-------------~i--v~~d~~~~~I 340 (493)
|+.+. +..| ||+++||.+...+.+|=+|.+.-. ..+.-+|+.|.+.+. +. +.+.+.+|.|
T Consensus 87 gl~i~~~~~NVIIrnl~i~~~~~~~~~DaI~i~g~~~~~s~nVWIDH~s~s~~~~~~~~~~~~~~Dg~idi~~~s~~VTI 166 (330)
T 2qy1_A 87 GIRVVGNAHNVIIQNMTIGLLQGGEDADSISLEGNSSGEPSKIWVDHNTVFASLTKCSGAGDASFDGGIDMKKGVHHVTV 166 (330)
T ss_dssp EEEEESSCEEEEEESCEEESCSSGGGCCSEEEECBTTBCCEEEEEESCEEECCCCCCTTCTTCSSCCSEEEESSCEEEEE
T ss_pred eEEEeCCCCeEEEeCeEEeCCCCCCCCcceeeccccCcccccEEEEeEEEEccccccccCCcceeecccccccCcceEEE
Confidence 66666 4445 889999998877667777776521 258899999977432 11 1345789999
Q ss_pred EceeeeecceeEEEeec-c----eeeeeEEEeeeccCCCCCCcceEeecCceeeeeeEEEeeecccceeeEeeeeEEEee
Q 011125 341 TNGFFLGDANIVLKSIK-G----RISGLTIVENMFNGSPARNVPIIKLDGEFSNIDQVVIERNNVNGMSLKSTAGKLSVA 415 (493)
Q Consensus 341 t~~~flg~a~v~l~~~~-~----~~~g~~I~~N~~~g~~~~gv~iv~~~g~f~~i~~v~vd~n~~~gm~~~~t~~r~~~~ 415 (493)
++|.|..-....|-... . .-.-+++.+|.|.+. ..-.|-+++ |.+..+++++-+- .-.++..+. -+++.++
T Consensus 167 Snn~f~~h~k~~L~G~sd~~~~~~~~~vT~h~N~f~~~-~~R~Pr~r~-G~~hv~NN~~~n~-~~~~i~~~~-~~~i~~e 242 (330)
T 2qy1_A 167 SYNYVYNYQKVALNGYSDSDTKNSAARTTYHHNRFENV-ESRVPLQRF-GLSHIYNNYFNNV-TTSGINVRM-GGIAKIE 242 (330)
T ss_dssp ESCEEEEEEECCEESSSTTCGGGGGCEEEEESCEEEEE-EECTTEEES-SEEEEESCEEEEE-CSCSEEEET-TCEEEEE
T ss_pred EcceeccCCeEEEECCCCccccCCCceEEEECcEEcCC-CCCCCceec-ceEEEEeeEEEcc-cceEeccCC-CcEEEEE
Confidence 99999876666665431 0 014799999999876 333466665 7788888877653 345555432 4678888
Q ss_pred cc
Q 011125 416 GN 417 (493)
Q Consensus 416 gn 417 (493)
+|
T Consensus 243 ~N 244 (330)
T 2qy1_A 243 SN 244 (330)
T ss_dssp SC
T ss_pred cc
Confidence 88
No 55
>3zsc_A Pectate trisaccharide-lyase; hydrolase; HET: ADA AQA; 1.94A {Thermotoga maritima}
Probab=93.59 E-value=0.5 Score=48.28 Aligned_cols=132 Identities=17% Similarity=0.229 Sum_probs=90.1
Q ss_pred eEEEeccee-EEEeeEEeccc-------ccccceeEEEeccccccceecccccccc--e-eee-eCCeeEEEEceeeeec
Q 011125 281 GVLLRGQAN-IVTRVHCYNKA-------TAFGGIGILVKLADAALTRIDNCYLDYT--G-IVL-EDPVQVHVTNGFFLGD 348 (493)
Q Consensus 281 GI~v~gq~~-ii~gvh~yN~~-------t~~GG~Gi~~~~~~~~~~rI~ncyldy~--~-iv~-~d~~~~~It~~~flg~ 348 (493)
|+.+.+..| ||+++|+.+.. ...+|=+|.+. +.+.-+|+.|.+... + +-+ +++.++.|++|.|..-
T Consensus 84 Gi~I~~a~NVIIrnl~i~~~~~~~~~~~~~~~~DaI~i~--~s~nVWIDHcs~s~~~Dg~idi~~~s~~vTISnn~f~~h 161 (340)
T 3zsc_A 84 GLVIKDAQNVIIRNIHFEGFYMEDDPRGKKYDFDYINVE--NSHHIWIDHITFVNGNDGAVDIKKYSNYITVSWNKFVDH 161 (340)
T ss_dssp EEEEESCEEEEEESCEEECCCCTTCTTSCSSCCCSEEEE--SCEEEEEESCEEESCSSCSEEEETTCEEEEEESCEEESC
T ss_pred ceEEEcCceEEEeCeEEECCccccCccCCcCCCCeEEEe--cCCcEEEEeeeeccCCccceEEecCCceEEEECcEeccC
Confidence 666665544 88999998863 12367777765 368899999977665 2 444 4679999999999987
Q ss_pred ceeEEEeec-ce-------eeeeEEEeeeccCCCCCCcceEeecCceeeeeeEEEee---------ecccceeeEeeeeE
Q 011125 349 ANIVLKSIK-GR-------ISGLTIVENMFNGSPARNVPIIKLDGEFSNIDQVVIER---------NNVNGMSLKSTAGK 411 (493)
Q Consensus 349 a~v~l~~~~-~~-------~~g~~I~~N~~~g~~~~gv~iv~~~g~f~~i~~v~vd~---------n~~~gm~~~~t~~r 411 (493)
....|-... +. -..+.+.+|.|.+. ..-.|-+++ |.+..+.+++-+- ..-.++..+ .-++
T Consensus 162 ~k~~LiG~sd~~~~~~d~g~~~vT~hhN~f~~~-~~R~Pr~r~-G~~Hv~NN~~~n~~~~~~~~~~~~~yai~~~-~~a~ 238 (340)
T 3zsc_A 162 DKVSLVGSSDKEDPEQAGQAYKVTYHHNYFKNL-IQRMPRIRF-GMAHVFNNFYSMGLRTGVSGNVFPIYGVASA-MGAK 238 (340)
T ss_dssp SBCCEECCCTTSCHHHHHHSCEEEEESCEEESC-CBCTTEEES-SEEEEESCEEECCCCCSCSSCCSCCEEEEEE-TTCE
T ss_pred ceeeEeCcCCCCccccccCCcEEEEECeEecCC-CCCCCcccC-CeEEEEccEEECCccccccccceeeeeEecC-CCCE
Confidence 666665431 11 13689999999988 444566664 7888889988770 112222222 2467
Q ss_pred EEeecc
Q 011125 412 LSVAGN 417 (493)
Q Consensus 412 ~~~~gn 417 (493)
+.+++|
T Consensus 239 i~~E~N 244 (340)
T 3zsc_A 239 VHVEGN 244 (340)
T ss_dssp EEEESC
T ss_pred EEEECc
Confidence 888998
No 56
>3vmv_A Pectate lyase; polysaccharide lyase family 1, beta-helix, pectolytic, polygalacturonate; 1.54A {Bacillus} PDB: 3vmw_A*
Probab=92.84 E-value=2.1 Score=43.43 Aligned_cols=18 Identities=33% Similarity=0.401 Sum_probs=12.9
Q ss_pred CCeEEeeccccCCCCCCchhHHHHHHHHH
Q 011125 55 NGRVFYPIGYGADPTGANESSDAILQALN 83 (493)
Q Consensus 55 ~~rv~nV~dYGAdptG~tDsT~Aiq~AI~ 83 (493)
..+++.|+..- .|++|++
T Consensus 19 gG~vv~Vttl~-----------dL~~Al~ 36 (326)
T 3vmv_A 19 GGRVEYASTGA-----------QIQQLID 36 (326)
T ss_dssp TSEEEEESSHH-----------HHHHHHH
T ss_pred CCeEEEECCHH-----------HHHHHHh
Confidence 56788887662 2888887
No 57
>1air_A Pectate lyase C, PELC; pectate cleavage, pectinolyitc activity, trans-elimination; 2.20A {Erwinia chrysanthemi} SCOP: b.80.1.1 PDB: 1o88_A 1o8d_A 1o8e_A 1o8f_A 1o8g_A 1o8h_A 1o8i_A 1o8j_A 1o8k_A 1o8l_A 1o8m_A 1plu_A 2pec_A 2ewe_A*
Probab=92.62 E-value=0.54 Score=48.09 Aligned_cols=131 Identities=18% Similarity=0.215 Sum_probs=82.6
Q ss_pred eEEEeccee-EEEeeEEecccc-cccceeEEEeccccccceecccccccc---------------ee-e-eeCCeeEEEE
Q 011125 281 GVLLRGQAN-IVTRVHCYNKAT-AFGGIGILVKLADAALTRIDNCYLDYT---------------GI-V-LEDPVQVHVT 341 (493)
Q Consensus 281 GI~v~gq~~-ii~gvh~yN~~t-~~GG~Gi~~~~~~~~~~rI~ncyldy~---------------~i-v-~~d~~~~~It 341 (493)
|+.+.+..| ||+++||-.... ..+|-+|.+. +.+.-+|+.|.+... +. - ..+.-+|.|+
T Consensus 104 gl~i~~~~NVIIrnl~i~~~~~~~~~~DaI~i~--~s~nVWIDH~s~s~~~~~~~g~~~~~~~~DGl~di~~~s~~VTIS 181 (353)
T 1air_A 104 GIWIKKSSDVVVQNMRIGYLPGGAKDGDMIRVD--DSPNVWVDHNELFAANHECDGTPDNDTTFESAVDIKGASNTVTVS 181 (353)
T ss_dssp EEEEESCCSEEEESCEEESCSCGGGTCCSEEEE--SCCSEEEESCEEECCSCCCTTCGGGCCSSCCSEEEESSCCEEEEE
T ss_pred eEEEeccCcEEEeccEEEeCCCCCCCCCeEEee--CCCcEEEEeeEEecCCcccccccccccccccceeeecccCcEEEE
Confidence 455554433 788888875421 2355666665 468999999976542 11 1 1466899999
Q ss_pred ceeeeecceeEEEeec--ceeeeeEEEeeeccCCCCCCcceEeecCceeeeeeEEEeeecccceeeEeeeeEEEeecc
Q 011125 342 NGFFLGDANIVLKSIK--GRISGLTIVENMFNGSPARNVPIIKLDGEFSNIDQVVIERNNVNGMSLKSTAGKLSVAGN 417 (493)
Q Consensus 342 ~~~flg~a~v~l~~~~--~~~~g~~I~~N~~~g~~~~gv~iv~~~g~f~~i~~v~vd~n~~~gm~~~~t~~r~~~~gn 417 (493)
+|.|.+.....|-... ..-.-+.+.+|.|.+.-.++ |-+++ |.++.+.+++-+- .-.++..+. -+++.+++|
T Consensus 182 nn~f~~h~k~~LiG~sd~~~g~~vT~hhN~f~~~~~R~-Pr~r~-G~~Hv~NN~~~n~-~~~~~~~~~-~~~i~~e~N 255 (353)
T 1air_A 182 YNYIHGVKKVGLDGSSSSDTGRNITYHHNYYNDVNARL-PLQRG-GLVHAYNNLYTNI-TGSGLNVRQ-NGQALIENN 255 (353)
T ss_dssp SCEEEEEEECCEESSSTTCCCCEEEEESCEEEEEEECS-CEEES-SEEEEESCEEEEE-SSCSEEEET-TCEEEEESC
T ss_pred eeEEcCCCceeEECCCcCCCCceEEEEceEEcCCcCCC-CCCcC-ceEEEEccEEECC-CCceeccCC-CcEEEEEce
Confidence 9999986655554321 11146999999998762333 44554 8888888877553 334555432 456777777
No 58
>1h80_A IOTA-carrageenase; hydrolase, IOTA-carrageenan double helix degradation; 1.6A {Alteromonas SP} SCOP: b.80.1.8 PDB: 1ktw_A* 3lmw_A
Probab=92.50 E-value=1.4 Score=46.60 Aligned_cols=41 Identities=12% Similarity=-0.077 Sum_probs=34.0
Q ss_pred cceEEeeeecEEEeeeEEeee-ccCc-EEEeeeeeEEEeeeeee
Q 011125 201 GGIFVIDSARIRINNCFFLHF-TTQG-ILVQRGHETFISSCFLG 242 (493)
Q Consensus 201 gGI~v~nSq~v~I~NC~~~~f-nTDG-I~V~~s~~v~Isns~ig 242 (493)
+|+.+ .|+.+.|.||.+..- +++| ++...++.+.|+||++.
T Consensus 168 DGi~i-~s~nV~I~n~~I~~gddgiGs~~~~~~~NV~V~n~~~~ 210 (464)
T 1h80_A 168 NGRLH-WSRNGIIERIKQNNALFGYGLIQTYGADNILFRNLHSE 210 (464)
T ss_dssp TTEEE-EEEEEEEEEEEEESCCTTCEEEEESEEEEEEEEEEEEE
T ss_pred CCcee-eccCEEEeceEEecCCCeEEecccCCEeEEEEEeeEEE
Confidence 45555 788899999998866 4567 78889999999999986
No 59
>2qy1_A Pectate lyase II; GAG lyase; 1.90A {Xanthomonas campestris PV} PDB: 2qxz_A 2qx3_A
Probab=91.98 E-value=3.6 Score=41.45 Aligned_cols=48 Identities=13% Similarity=0.186 Sum_probs=27.3
Q ss_pred eecceEEe-----eeecEEEeeeEEeee---cc-------Cc-EEEe-eeeeEEEeeeeeeeccc
Q 011125 199 RGGGIFVI-----DSARIRINNCFFLHF---TT-------QG-ILVQ-RGHETFISSCFLGQRST 246 (493)
Q Consensus 199 ~ggGI~v~-----nSq~v~I~NC~~~~f---nT-------DG-I~V~-~s~~v~Isns~ig~~~t 246 (493)
.+++|.+. +++.++||.|.+..- +. || |.+. .+..+.|++|+|.+|..
T Consensus 112 ~~DaI~i~g~~~~~s~nVWIDH~s~s~~~~~~~~~~~~~~Dg~idi~~~s~~VTISnn~f~~h~k 176 (330)
T 2qy1_A 112 DADSISLEGNSSGEPSKIWVDHNTVFASLTKCSGAGDASFDGGIDMKKGVHHVTVSYNYVYNYQK 176 (330)
T ss_dssp GCCSEEEECBTTBCCEEEEEESCEEECCCCCCTTCTTCSSCCSEEEESSCEEEEEESCEEEEEEE
T ss_pred CCcceeeccccCcccccEEEEeEEEEccccccccCCcceeecccccccCcceEEEEcceeccCCe
Confidence 34666666 466677777766421 11 33 3443 35677777777766543
No 60
>3vmv_A Pectate lyase; polysaccharide lyase family 1, beta-helix, pectolytic, polygalacturonate; 1.54A {Bacillus} PDB: 3vmw_A*
Probab=91.91 E-value=0.91 Score=46.03 Aligned_cols=131 Identities=19% Similarity=0.217 Sum_probs=90.8
Q ss_pred eEEEeccee-EEEeeEEecccccccceeEEEeccccccceecccccccc-----------ee-e-eeCCeeEEEEceeee
Q 011125 281 GVLLRGQAN-IVTRVHCYNKATAFGGIGILVKLADAALTRIDNCYLDYT-----------GI-V-LEDPVQVHVTNGFFL 346 (493)
Q Consensus 281 GI~v~gq~~-ii~gvh~yN~~t~~GG~Gi~~~~~~~~~~rI~ncyldy~-----------~i-v-~~d~~~~~It~~~fl 346 (493)
|+.+.+..| ||+++|+.+.. ..+|=+|.+.- ..+.-+|+.|-+.+. ++ - -++.-.|.|++|.|.
T Consensus 96 gl~i~~a~NVIIrNl~i~~~~-~~~~DaI~i~~-~s~nVWIDH~s~s~~~~g~~~~~~~Dgl~di~~~s~~VTISnn~f~ 173 (326)
T 3vmv_A 96 GIRLSNAHNIIIQNVSIHHVR-EGEGTAIEVTD-DSKNVWIDHNEFYSEFPGNGDSDYYDGLVDMKRNAEYITVSWNKFE 173 (326)
T ss_dssp CEEEESEEEEEEESCEEECCC-STTSCSEEEET-TCEEEEEESCEEECCSSTTSCTTSSCCSEEECTTCEEEEEESCEEE
T ss_pred EEEEEecceEEEECeEEEcCC-CCCCCeEEEec-CCCcEEEEeeEEeccccCCcCccccCcceEecCCCceEEEEceEEe
Confidence 677765545 89999999876 45777777662 147889999976421 22 1 245689999999999
Q ss_pred ecceeEEEeecce----eeeeEEEeeeccCCCCCCcceEeecCceeeeeeEEEeeecccceeeEeeeeEEEeecc
Q 011125 347 GDANIVLKSIKGR----ISGLTIVENMFNGSPARNVPIIKLDGEFSNIDQVVIERNNVNGMSLKSTAGKLSVAGN 417 (493)
Q Consensus 347 g~a~v~l~~~~~~----~~g~~I~~N~~~g~~~~gv~iv~~~g~f~~i~~v~vd~n~~~gm~~~~t~~r~~~~gn 417 (493)
.-....|-...-. -..+++.+|.|.+. ..-.|-+++ |.+..+.+++-+.. -.++..+. -+++.+++|
T Consensus 174 ~h~k~~LiG~sd~~~~~~~~vT~~~N~f~~~-~~R~Pr~r~-G~~Hv~NN~~~n~~-~~~~~~~~-~a~v~~e~N 244 (326)
T 3vmv_A 174 NHWKTMLVGHTDNASLAPDKITYHHNYFNNL-NSRVPLIRY-ADVHMFNNYFKDIN-DTAINSRV-GARVFVENN 244 (326)
T ss_dssp EEEECEEECSSSCGGGCCEEEEEESCEEEEE-EECTTEEES-CEEEEESCEEEEES-SCSEEEET-TCEEEEESC
T ss_pred cCceEEEECCCCCCcccCccEEEEeeEecCC-cCcCCcccC-CcEEEEccEEECCC-ceEEeecC-CcEEEEEce
Confidence 8777776654210 13699999999877 444466665 78888888887543 35555543 377888888
No 61
>1vbl_A Pectate lyase 47; PL 47, thermostable, bacillus subtilis, pectin, calcium ION; 1.91A {Bacillus SP}
Probab=91.59 E-value=0.77 Score=48.05 Aligned_cols=132 Identities=13% Similarity=0.199 Sum_probs=85.9
Q ss_pred eEEEeccee-EEEeeEEecccc---------------cccceeEEEeccccccceeccccccc-----------------
Q 011125 281 GVLLRGQAN-IVTRVHCYNKAT---------------AFGGIGILVKLADAALTRIDNCYLDY----------------- 327 (493)
Q Consensus 281 GI~v~gq~~-ii~gvh~yN~~t---------------~~GG~Gi~~~~~~~~~~rI~ncyldy----------------- 327 (493)
|+.+.+..| ||+++||.+... ..+|=+|.+. +.+.-+|+.|.|..
T Consensus 149 gl~i~~~~NVIIrNl~i~~~~~~~p~~~p~~~~~~~~~~~~DaI~i~--~s~nVWIDHcs~s~~~~~d~~~~~~~Gr~~~ 226 (416)
T 1vbl_A 149 GFLIKNVDNVIIRNIEFEAPLDYFPEWDPTDGTLGEWNSEYDSISIE--GSSHIWIDHNTFTDGDHPDRSLGTYFGRPFQ 226 (416)
T ss_dssp EEEEESCEEEEEESCEEECCCCSSCEEETTSTTTCEEECCCCSEEEE--SCEEEEEESCEEECTTCCGGGSCEETTEECC
T ss_pred EEEeecCceEEEeCeEEEcCccccccccccccccccccCCCceEEec--CCceEEEEccEEecCCCcccccccccCccee
Confidence 677776555 889999976421 1234455553 56899999997763
Q ss_pred --cee--eeeCCeeEEEEceeeeecceeEEEeec-ce-----eeeeEEEeeeccCCCCCCcceEeecCceeeeeeEEEee
Q 011125 328 --TGI--VLEDPVQVHVTNGFFLGDANIVLKSIK-GR-----ISGLTIVENMFNGSPARNVPIIKLDGEFSNIDQVVIER 397 (493)
Q Consensus 328 --~~i--v~~d~~~~~It~~~flg~a~v~l~~~~-~~-----~~g~~I~~N~~~g~~~~gv~iv~~~g~f~~i~~v~vd~ 397 (493)
-+. +.++.-.|.|++|.|.+-....|-... .. -.-+++.+|.|.+. ..-.|-+++ |.+..+.+++.+.
T Consensus 227 ~~DGl~Di~~~s~~VTISnn~f~~h~k~~LiG~sd~~~~d~g~~~VT~hhN~f~~~-~~R~Pr~R~-G~~Hv~NN~~~n~ 304 (416)
T 1vbl_A 227 QHDGALDIKNSSDFITISYNVFTNHDKVTLIGASDSRMADSGHLRVTLHHNYYKNV-TQRLPRVRF-GQVHIYNNYYEFS 304 (416)
T ss_dssp CCCCSEEEESSCEEEEEESCEEEEEEECCEECSCTTCGGGTTCCCEEEESCEEEEE-EECSSEESS-CEEEEESCEEEEC
T ss_pred ecccceeeecCCCcEEEEeeEEcCCCceeEeCCCCCCcccCCceEEEEECcEecCC-ccCCccccc-ceEEEEcceEECC
Confidence 122 244678999999999986665555431 11 12499999999876 333355654 7888888887654
Q ss_pred ec-----ccceeeEeeeeEEEeecc
Q 011125 398 NN-----VNGMSLKSTAGKLSVAGN 417 (493)
Q Consensus 398 n~-----~~gm~~~~t~~r~~~~gn 417 (493)
.. ..++.. ..-+++.+++|
T Consensus 305 ~~~~~~~~ya~g~-~~~~~i~~E~N 328 (416)
T 1vbl_A 305 NLADYDFQYAWGV-GVFSQIYAQNN 328 (416)
T ss_dssp TTSSSCCCCSEEE-ETTCEEEEESC
T ss_pred CCCcccceeEecc-CCCcEEEEECC
Confidence 32 134443 23567888888
No 62
>1pcl_A Pectate lyase E; lyase (acting on polysaccharides); 2.20A {Erwinia chrysanthemi} SCOP: b.80.1.1
Probab=91.12 E-value=1.4 Score=45.10 Aligned_cols=48 Identities=8% Similarity=0.035 Sum_probs=35.5
Q ss_pred eecceEEeeeecEEEeeeEEeee----------------ccCcE-EEe-eeeeEEEeeeeeeeccc
Q 011125 199 RGGGIFVIDSARIRINNCFFLHF----------------TTQGI-LVQ-RGHETFISSCFLGQRST 246 (493)
Q Consensus 199 ~ggGI~v~nSq~v~I~NC~~~~f----------------nTDGI-~V~-~s~~v~Isns~ig~~~t 246 (493)
.+++|.+..++.++||.|.+... ..||. .+. .+..+.|++|+|.+|..
T Consensus 132 ~~DaI~i~~s~nVWIDH~s~s~~~~~d~~~~~~~G~~~~~~Dgl~Di~~~s~~VTiS~n~f~~h~k 197 (355)
T 1pcl_A 132 EWDAAVIDNSTNVWVDHVTISDGSFTDDKYTTKDGEKYVQHDGALDIKKGSDYVTISYSRFELHDK 197 (355)
T ss_pred cCceEEecCCCcEEEEeeEEeccccCccccccccCccccccccceeeecCCCcEEEEeeEEcCCCc
Confidence 35788888888899999988753 14663 244 57889999999987763
No 63
>3grh_A YBHC, acyl-COA thioester hydrolase YBGC; beta-helix, periplasmic, lipoprotein, outer membrane, carbohydrate esterase family 8; 1.70A {Escherichia coli k-12}
Probab=90.78 E-value=18 Score=38.01 Aligned_cols=46 Identities=20% Similarity=0.306 Sum_probs=31.0
Q ss_pred HHHHHHHHhhhccCCCcccccccccCCceEEEecCceEEeeccEEeCCCCccee-EeCC
Q 011125 76 DAILQALNDAFNVQSGLELLPGVKDLGGVIIDFQGGNYKISKPIRFPPGVGNVV-VQGG 133 (493)
Q Consensus 76 ~Aiq~AI~~A~~~~~~~~l~pgi~~~Gga~V~lPgGTYlIs~pI~lp~g~Gni~-i~~G 133 (493)
.-||+||++|-.... ....+|++.+|+|+ ..|.+|..+.+|+ +.+|
T Consensus 90 ~TIqeAVdaap~~~~----------~~r~vI~Ik~GvY~--E~V~Ip~~K~~ItL~G~G 136 (422)
T 3grh_A 90 TTIQAAVDAAIIKRT----------NKRQYIAVMPGEYQ--GTVYVPAAPGGITLYGTG 136 (422)
T ss_dssp SSHHHHHHHHHTTCC----------SSCEEEEECSEEEE--SCEEECCCSSCEEEEECS
T ss_pred CCHHHHHHhchhcCC----------CccEEEEEeCCeEe--eeEEecCCCCcEEEEecc
Confidence 458888887642111 12369999999998 3699996666776 4445
No 64
>2o04_A Pectate lyase, PL; hexasaccharide compound II, calciums; HET: ADA; 1.70A {Bacillus subtilis} PDB: 2nzm_A* 2o0v_A* 2o0w_A 2o17_A* 2o1d_A* 2bsp_A 1bn8_A 3krg_A*
Probab=89.79 E-value=0.95 Score=47.09 Aligned_cols=133 Identities=9% Similarity=0.172 Sum_probs=84.7
Q ss_pred eeEEEecceeEEEeeEEecccc---------------cccceeEEEeccccccceecccccccc----------------
Q 011125 280 IGVLLRGQANIVTRVHCYNKAT---------------AFGGIGILVKLADAALTRIDNCYLDYT---------------- 328 (493)
Q Consensus 280 ~GI~v~gq~~ii~gvh~yN~~t---------------~~GG~Gi~~~~~~~~~~rI~ncyldy~---------------- 328 (493)
.|+.+.++--||+++||.+... ...+=+|.+. +.+.-+|+.|.+...
T Consensus 143 ~gl~i~~~NVIIrnl~i~~~~~~~p~~~p~~~~~~~~~~~~DaI~i~--~s~nVWIDHcs~s~~~~~d~~~~~~~G~~~~ 220 (399)
T 2o04_A 143 GNFQIKSDNVIIRNIEFQDAYDYFPQWDPTDGSSGNWNSQYDNITIN--GGTHIWIDHCTFNDGSRPDSTSPKYYGRKYQ 220 (399)
T ss_dssp CEEEECSEEEEEESCEEECCCCSSCEEETTSSTTCEEECCCCSEEEE--SCEEEEEESCEEECTTCCGGGSCEETTEECC
T ss_pred CEEEeeCCCEEEeCeEEecCccccccccccccccccccCCCCeEEec--CCCcEEEEeeeeecCCCccccccccccceee
Confidence 3677777323789999965421 1234455553 468899999977631
Q ss_pred ---ee--eeeCCeeEEEEceeeeecceeEEEeec-ce-----eeeeEEEeeeccCCCCCCcceEeecCceeeeeeEEEee
Q 011125 329 ---GI--VLEDPVQVHVTNGFFLGDANIVLKSIK-GR-----ISGLTIVENMFNGSPARNVPIIKLDGEFSNIDQVVIER 397 (493)
Q Consensus 329 ---~i--v~~d~~~~~It~~~flg~a~v~l~~~~-~~-----~~g~~I~~N~~~g~~~~gv~iv~~~g~f~~i~~v~vd~ 397 (493)
+. +.++.-+|.|++|.|.+-....|-... .. -..+++.+|.|.+. ..-.|-+++ |.+..+++++.+.
T Consensus 221 ~~Dgl~Di~~~s~~VTISnn~f~~h~k~~LiG~sd~~~~d~g~~~vT~h~N~f~~~-~~R~Pr~R~-G~~Hv~NN~~~n~ 298 (399)
T 2o04_A 221 HHDGQTDASNGANYITMSYNYYHDHDKSSIFGSSDSKTSDDGKLKITLHHNRYKNI-VQAAPRVRF-GQVHVYNNYYEGS 298 (399)
T ss_dssp CCCCSEEEETTCEEEEEESCEEEEEEECCEESCCTTCGGGTTCCCEEEESCEEEEE-EECTTEESS-CEEEEESCEEECC
T ss_pred ccccceeeeccCCcEEEEeeEEcCCCceeEeCCCCCCccccCceeEEEECcEecCC-cccCCCccc-ceEEEEcceEECC
Confidence 21 234678999999999986665555431 11 12699999999877 333366654 7888888887654
Q ss_pred ec------ccceeeEeeeeEEEeecc
Q 011125 398 NN------VNGMSLKSTAGKLSVAGN 417 (493)
Q Consensus 398 n~------~~gm~~~~t~~r~~~~gn 417 (493)
.. ..++.. ..-+++.+++|
T Consensus 299 ~~~~~~~~~ya~g~-~~~~~i~~e~N 323 (399)
T 2o04_A 299 TSSSSYPFSYAWGI-GKSSKIYAQNN 323 (399)
T ss_dssp TTCSSSCCCCSEEE-CTTCEEEEESC
T ss_pred CCCCccceeeEecc-CCCcEEEEEce
Confidence 32 133332 23467888888
No 65
>1pe9_A Pectate lyase A; parallel beta helix; 1.60A {Erwinia chrysanthemi} SCOP: b.80.1.1 PDB: 1ooc_A 1jta_A 1jrg_A
Probab=89.60 E-value=1.2 Score=45.76 Aligned_cols=133 Identities=17% Similarity=0.244 Sum_probs=83.5
Q ss_pred eEEE---eccee-EEEeeEEecccc---------c--ccceeEEEeccccccceeccccccc------------------
Q 011125 281 GVLL---RGQAN-IVTRVHCYNKAT---------A--FGGIGILVKLADAALTRIDNCYLDY------------------ 327 (493)
Q Consensus 281 GI~v---~gq~~-ii~gvh~yN~~t---------~--~GG~Gi~~~~~~~~~~rI~ncyldy------------------ 327 (493)
|+.+ .+..| ||+++||.+... + ..|-+|.+.. +.+.-+|+-|-|..
T Consensus 104 gl~i~~~~~~~NVIIrNl~i~~~~d~~p~~~~~~g~~~~~DaI~i~~-~s~nVWIDHcs~s~~~~~~~~~~~~~G~~~~~ 182 (361)
T 1pe9_A 104 SLIIDGTDGTNNVIIRNVYIQTPIDVEPHYEKGDGWNAEWDAMNITN-GAHHVWIDHVTISDGNFTDDMYTTKDGETYVQ 182 (361)
T ss_dssp EEEEEGGGTCEEEEEESCEEECCCCSSCEEETTTEEECCCCSEEEET-TCEEEEEESCEEECTTSCGGGCCEETTEECCC
T ss_pred EEEEecCCCCceEEEeCeEEEcCcccccccccccCcccCCceEEeec-CCceEEEEccEeecccccccccccccCcceee
Confidence 5666 34444 788899876421 0 2345555541 15889999997763
Q ss_pred -cee--eeeCCeeEEEEceeeeecceeEEEeecce-------eeeeEEEeeeccCCCCCCcceEeecCceeeeeeEEEee
Q 011125 328 -TGI--VLEDPVQVHVTNGFFLGDANIVLKSIKGR-------ISGLTIVENMFNGSPARNVPIIKLDGEFSNIDQVVIER 397 (493)
Q Consensus 328 -~~i--v~~d~~~~~It~~~flg~a~v~l~~~~~~-------~~g~~I~~N~~~g~~~~gv~iv~~~g~f~~i~~v~vd~ 397 (493)
-+. +.+++-.|.|++|.|.+-....|-...-. -.-+++.+|.|.+. ..-.|-+++ |.+..+.+++.+.
T Consensus 183 ~DgllDi~~~s~~VTiS~n~f~~h~k~~LiG~sd~~~~~d~g~~~vT~hhN~f~~~-~~R~Pr~R~-G~~Hv~NN~~~~~ 260 (361)
T 1pe9_A 183 HDGALDIKRGSDYVTISNSLIDQHDKTMLIGHSDSNGSQDKGKLHVTLFNNVFNRV-TERAPRVRY-GSIHSFNNVFKGD 260 (361)
T ss_dssp CCCSEEECTTCEEEEEESCEEEEEEECEEESCCTTCHHHHTTCCEEEEESCEEEEE-EECSSEESS-CEEEEESCEEEEE
T ss_pred ccceeeeecCCCcEEEEeeEEcCCCceeEecCCCCCcccccCcceEEEECeEEcCc-cccCccccc-ceEEEEcceEecc
Confidence 121 23467899999999998766666553211 12599999999876 333466654 7788888888653
Q ss_pred ec------ccceeeEeeeeEEEeecc
Q 011125 398 NN------VNGMSLKSTAGKLSVAGN 417 (493)
Q Consensus 398 n~------~~gm~~~~t~~r~~~~gn 417 (493)
.. ..++..+ .-+++.+++|
T Consensus 261 ~~~~~~~~~ya~g~~-~~~~i~~E~N 285 (361)
T 1pe9_A 261 AKDPVYRYQYSFGIG-TSGSVLSEGN 285 (361)
T ss_dssp TTCSSSCCCCSEEEC-TTCEEEEESC
T ss_pred cCCCccccceEecCC-CCcEEEEECC
Confidence 21 2233322 2467888888
No 66
>2x3h_A K5 lyase, K5A lyase; bacteriophage, glycosaminoglycan; 1.60A {Enterobacteria phage k1-5}
Probab=87.67 E-value=10 Score=38.94 Aligned_cols=62 Identities=21% Similarity=0.304 Sum_probs=49.3
Q ss_pred CCeEEeeccccCCCCCCchhHHHHHHHHHhhhccCCCcccccccccCCceEEEecCceEEeeccEEeCCCCccee-EeCC
Q 011125 55 NGRVFYPIGYGADPTGANESSDAILQALNDAFNVQSGLELLPGVKDLGGVIIDFQGGNYKISKPIRFPPGVGNVV-VQGG 133 (493)
Q Consensus 55 ~~rv~nV~dYGAdptG~tDsT~Aiq~AI~~A~~~~~~~~l~pgi~~~Gga~V~lPgGTYlIs~pI~lp~g~Gni~-i~~G 133 (493)
..||...++|||.++-.+|+++||.+.+..- ..|.+|.|.|--| -|.+..| ++- ...|
T Consensus 61 darvls~k~fga~~~~~~d~~~~~~~sl~s~------------------~~v~i~~gvf~ss-~i~~~~c--~l~g~g~g 119 (542)
T 2x3h_A 61 DARVLTSKPFGAAGDATTDDTEVIAASLNSQ------------------KAVTISDGVFSSS-GINSNYC--NLDGRGSG 119 (542)
T ss_dssp HHHBCBSSCTTCCCBSSSCCHHHHHHHHTSS------------------SCEECCSEEEEEC-CEEESCC--EEECTTTE
T ss_pred hheeeecccccccCCcccCcHHHHHhhhccc------------------ccEeccccccccc-ccccccc--cccccCCc
Confidence 3688889999999999999999999988631 3688999999875 5888888 344 4557
Q ss_pred eEEe
Q 011125 134 TLRA 137 (493)
Q Consensus 134 TLkA 137 (493)
+|+-
T Consensus 120 ~~~~ 123 (542)
T 2x3h_A 120 VLSH 123 (542)
T ss_dssp EEEE
T ss_pred eeee
Confidence 7773
No 67
>1air_A Pectate lyase C, PELC; pectate cleavage, pectinolyitc activity, trans-elimination; 2.20A {Erwinia chrysanthemi} SCOP: b.80.1.1 PDB: 1o88_A 1o8d_A 1o8e_A 1o8f_A 1o8g_A 1o8h_A 1o8i_A 1o8j_A 1o8k_A 1o8l_A 1o8m_A 1plu_A 2pec_A 2ewe_A*
Probab=87.19 E-value=6.9 Score=39.94 Aligned_cols=48 Identities=13% Similarity=0.111 Sum_probs=32.7
Q ss_pred eecceEEeeeecEEEeeeEEeeec------------cCcE-EE-eeeeeEEEeeeeeeeccc
Q 011125 199 RGGGIFVIDSARIRINNCFFLHFT------------TQGI-LV-QRGHETFISSCFLGQRST 246 (493)
Q Consensus 199 ~ggGI~v~nSq~v~I~NC~~~~fn------------TDGI-~V-~~s~~v~Isns~ig~~~t 246 (493)
.+++|.+..++.++||.|.+.... -||. .+ ..+..+.|++|.|.+|..
T Consensus 129 ~~DaI~i~~s~nVWIDH~s~s~~~~~~~g~~~~~~~~DGl~di~~~s~~VTISnn~f~~h~k 190 (353)
T 1air_A 129 DGDMIRVDDSPNVWVDHNELFAANHECDGTPDNDTTFESAVDIKGASNTVTVSYNYIHGVKK 190 (353)
T ss_dssp TCCSEEEESCCSEEEESCEEECCSCCCTTCGGGCCSSCCSEEEESSCCEEEEESCEEEEEEE
T ss_pred CCCeEEeeCCCcEEEEeeEEecCCcccccccccccccccceeeecccCcEEEEeeEEcCCCc
Confidence 456787777888888888776421 1443 44 357788888888887764
No 68
>1pe9_A Pectate lyase A; parallel beta helix; 1.60A {Erwinia chrysanthemi} SCOP: b.80.1.1 PDB: 1ooc_A 1jta_A 1jrg_A
Probab=85.03 E-value=14 Score=37.88 Aligned_cols=47 Identities=11% Similarity=0.171 Sum_probs=34.9
Q ss_pred ecceEEee-eecEEEeeeEEeee----------------ccCc-EEEe-eeeeEEEeeeeeeeccc
Q 011125 200 GGGIFVID-SARIRINNCFFLHF----------------TTQG-ILVQ-RGHETFISSCFLGQRST 246 (493)
Q Consensus 200 ggGI~v~n-Sq~v~I~NC~~~~f----------------nTDG-I~V~-~s~~v~Isns~ig~~~t 246 (493)
+++|.+.. +..++||.|.+... ..|| |.+. .+..+.|++|+|.+|..
T Consensus 143 ~DaI~i~~~s~nVWIDHcs~s~~~~~~~~~~~~~G~~~~~~DgllDi~~~s~~VTiS~n~f~~h~k 208 (361)
T 1pe9_A 143 WDAMNITNGAHHVWIDHVTISDGNFTDDMYTTKDGETYVQHDGALDIKRGSDYVTISNSLIDQHDK 208 (361)
T ss_dssp CCSEEEETTCEEEEEESCEEECTTSCGGGCCEETTEECCCCCCSEEECTTCEEEEEESCEEEEEEE
T ss_pred CceEEeecCCceEEEEccEeecccccccccccccCcceeeccceeeeecCCCcEEEEeeEEcCCCc
Confidence 57888888 88899999988743 1466 3344 57888899999888764
No 69
>1vbl_A Pectate lyase 47; PL 47, thermostable, bacillus subtilis, pectin, calcium ION; 1.91A {Bacillus SP}
Probab=81.53 E-value=17 Score=38.01 Aligned_cols=19 Identities=26% Similarity=0.310 Sum_probs=10.7
Q ss_pred cceEEeeeecEEEeeeEEe
Q 011125 201 GGIFVIDSARIRINNCFFL 219 (493)
Q Consensus 201 gGI~v~nSq~v~I~NC~~~ 219 (493)
++|.+..+..|+||.|.+.
T Consensus 190 DaI~i~~s~nVWIDHcs~s 208 (416)
T 1vbl_A 190 DSISIEGSSHIWIDHNTFT 208 (416)
T ss_dssp CSEEEESCEEEEEESCEEE
T ss_pred ceEEecCCceEEEEccEEe
Confidence 4555555555666666554
No 70
>3ju4_A Endo-N-acetylneuraminidase; endonf, polysia, high-resolution, glycosidase, hydrolase; HET: SLB; 0.98A {Enterobacteria phage K1F} PDB: 3gvl_A* 3gvj_A* 3gvk_A* 1v0e_A 1v0f_A*
Probab=73.79 E-value=1.3 Score=47.23 Aligned_cols=38 Identities=32% Similarity=0.423 Sum_probs=31.0
Q ss_pred ccCCCCCCchhHHHHHHHHHhhhccCCCcccccccccCCceEEEecCceEEee
Q 011125 64 YGADPTGANESSDAILQALNDAFNVQSGLELLPGVKDLGGVIIDFQGGNYKIS 116 (493)
Q Consensus 64 YGAdptG~tDsT~Aiq~AI~~A~~~~~~~~l~pgi~~~Gga~V~lPgGTYlIs 116 (493)
=||++||++|+|+|+..|+.++- +|-.|.=.+=||+++
T Consensus 4 ~~a~gdgvtddt~a~~~~l~~~~---------------~~~~IDG~G~T~kVs 41 (670)
T 3ju4_A 4 GSAKGDGVTDDTAALTSALNDTP---------------VGQKINGNGKTYKVT 41 (670)
T ss_dssp CCCCCEEEEECHHHHHHHHHHSC---------------TTSCEECTTCEEECS
T ss_pred CcccCCCccCcHHHHHHHhccCC---------------CCeEEeCCCceEEee
Confidence 47999999999999999998742 455777777788886
No 71
>2o04_A Pectate lyase, PL; hexasaccharide compound II, calciums; HET: ADA; 1.70A {Bacillus subtilis} PDB: 2nzm_A* 2o0v_A* 2o0w_A 2o17_A* 2o1d_A* 2bsp_A 1bn8_A 3krg_A*
Probab=70.45 E-value=48 Score=34.34 Aligned_cols=48 Identities=15% Similarity=0.164 Sum_probs=29.3
Q ss_pred eecceEEeeeecEEEeeeEEeee----------------ccCcE-EEe-eeeeEEEeeeeeeeccc
Q 011125 199 RGGGIFVIDSARIRINNCFFLHF----------------TTQGI-LVQ-RGHETFISSCFLGQRST 246 (493)
Q Consensus 199 ~ggGI~v~nSq~v~I~NC~~~~f----------------nTDGI-~V~-~s~~v~Isns~ig~~~t 246 (493)
.+++|.+..+..|+||.|.+... ..||. .+. .+..+.|++|+|.+|..
T Consensus 182 ~~DaI~i~~s~nVWIDHcs~s~~~~~d~~~~~~~G~~~~~~Dgl~Di~~~s~~VTISnn~f~~h~k 247 (399)
T 2o04_A 182 QYDNITINGGTHIWIDHCTFNDGSRPDSTSPKYYGRKYQHHDGQTDASNGANYITMSYNYYHDHDK 247 (399)
T ss_dssp CCCSEEEESCEEEEEESCEEECTTCCGGGSCEETTEECCCCCCSEEEETTCEEEEEESCEEEEEEE
T ss_pred CCCeEEecCCCcEEEEeeeeecCCCccccccccccceeeccccceeeeccCCcEEEEeeEEcCCCc
Confidence 34667666677777777777632 13553 233 46677777777776653
No 72
>2x6w_A Tail spike protein; viral protein, beta-helix, hydrolase; HET: RAM GLC GLA NAG NDG; 1.35A {Enterobacteria phage HK620} PDB: 2vji_A 2vjj_A* 2x85_A* 2x6x_A* 2x6y_A*
Probab=58.37 E-value=58 Score=35.71 Aligned_cols=43 Identities=12% Similarity=0.083 Sum_probs=29.4
Q ss_pred ccccceeeeeeE----eecceeecceEEeeeecEEEeeeEEeeeccCcEEE-eeee
Q 011125 182 TYYEDITFRDVL----FDSGFRGGGIFVIDSARIRINNCFFLHFTTQGILV-QRGH 232 (493)
Q Consensus 182 ~~~~~IT~~~lv----~D~n~~ggGI~v~nSq~v~I~NC~~~~fnTDGI~V-~~s~ 232 (493)
..|+.++++++. .+.....+|| +.|.||.+. -++|.|.+ .++.
T Consensus 207 ~~c~NVtI~nvtfi~aI~sspNTDGI-------V~I~nc~I~-tGDDCIAI~KSGs 254 (600)
T 2x6w_A 207 GYGSNCYVRKCRFINLVNSSVNADHS-------TVYVNCPYS-GVESCYFSMSSSF 254 (600)
T ss_dssp TBEEEEEEESCEEECCCCCSSCCCEE-------EEEECSSSE-EEESCEEECCCTT
T ss_pred CCcccEEEeCeEEcceEecCCCCCEE-------EEEEeeEEe-cCCcEEEEecCCC
Confidence 568888888877 5542234565 888888775 47888888 5543
No 73
>3t9g_A Pectate lyase; PL3, parallel beta-helix; HET: GOL; 1.50A {Caldicellulosiruptor bescii}
Probab=27.43 E-value=4.1e+02 Score=25.25 Aligned_cols=50 Identities=10% Similarity=0.145 Sum_probs=37.1
Q ss_pred eeeeeEeecceeecceEEeeeecEEEeeeEEeeeccCcEEEeeeeeEEEeeee
Q 011125 188 TFRDVLFDSGFRGGGIFVIDSARIRINNCFFLHFTTQGILVQRGHETFISSCF 240 (493)
Q Consensus 188 T~~~lv~D~n~~ggGI~v~nSq~v~I~NC~~~~fnTDGI~V~~s~~v~Isns~ 240 (493)
|++++++-.+ .+.|||...+ -.|+|+.+...+.|-+++.++....|.+.-
T Consensus 55 TLkNvIIG~~-~~dGIHC~G~--ctl~NVwwedVcEDA~T~kg~g~~~I~GGg 104 (196)
T 3t9g_A 55 NLKNVIIGAP-GCDGIHCYGD--NVVENVVWEDVGEDALTVKSEGVVEVIGGS 104 (196)
T ss_dssp EEEEEEECSC-CTTCEEECSS--EEEEEEEESSCCSCSEEECSSEEEEEESCE
T ss_pred EEEEEEECCC-CcCcEEEcCC--EeEEEEEeeeeeceeeEEcCCCeEEEECCC
Confidence 7888888555 5688888654 788899888889999999866555555443
No 74
>3riq_A Tailspike protein; right handed beta-helix, endorhamnosidase, lipopolysaccharide, viral protein; 1.50A {Siphovirus 9na}
Probab=23.64 E-value=1.7e+02 Score=31.19 Aligned_cols=88 Identities=16% Similarity=0.148 Sum_probs=54.7
Q ss_pred CCceeeeEEEe-ecceeEEEecceeEEEeeEEecccccccceeEEEeccc--cccceeccc-ccccceeeeeCCeeEEEE
Q 011125 266 NDNAITDVTIF-SAAIGVLLRGQANIVTRVHCYNKATAFGGIGILVKLAD--AALTRIDNC-YLDYTGIVLEDPVQVHVT 341 (493)
Q Consensus 266 Nd~~ItD~~i~-sa~~GI~v~gq~~ii~gvh~yN~~t~~GG~Gi~~~~~~--~~~~rI~nc-yldy~~iv~~d~~~~~It 341 (493)
+++.|.+...+ +--.|++.-||..+++++..+.+ .|.|+|..-.+ +++.-+-+| |++|+ ..||.|.
T Consensus 308 ~nHii~Ni~~~~~lGVG~~~DG~~~~v~ni~~~dc----ag~G~~~~~~~~~ftNitvI~~N~~~~~------~nQI~i~ 377 (543)
T 3riq_A 308 TQHIIRNIITRDCMGIGAWWDGQKNIIDNVVTYEA----HKEGMFDRGTNNDITNITVVCANKDLTN------LNQIVCE 377 (543)
T ss_dssp CCCEEEEEEEESCSSCSSEECSSSCEEEEEEEESC----SSCSEEECSSSCEEEEEEEESCSTTCSS------CCSEEEC
T ss_pred hhhhhhhhheeccceeeeeecCCCCeEeeEEeecc----ccCcceeeccCcceeeEEEEeccccCCC------cceEEEe
Confidence 34577777666 45678888899889999999999 79999988433 233222223 33332 3677776
Q ss_pred ceeeeecce--------eEEEeecceeeee
Q 011125 342 NGFFLGDAN--------IVLKSIKGRISGL 363 (493)
Q Consensus 342 ~~~flg~a~--------v~l~~~~~~~~g~ 363 (493)
+-..+.-=+ .++++-+..++|+
T Consensus 378 G~~~vnGi~I~~~~~~G~~I~APnStvS~i 407 (543)
T 3riq_A 378 GGSRLRGIMVHAYTTQGYAVYAPSSEVSNV 407 (543)
T ss_dssp SCCEEEEEEEECSSCSSCSEEEEEEEEEEE
T ss_pred cCcEecceEeeccCCCceEEECCCcccccc
Confidence 655554222 3445555556654
No 75
>3n6z_A Putative immunoglobulin A1 protease; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE; 1.30A {Bacteroides ovatus}
Probab=20.73 E-value=1.5e+02 Score=30.34 Aligned_cols=86 Identities=21% Similarity=0.224 Sum_probs=45.0
Q ss_pred ccceEEEEEccCCceeeeEEEee----cceeEEEecceeEEEeeEEeccc-----ccccceeEEEecc--c--cccceec
Q 011125 255 GFSGTAIDLASNDNAITDVTIFS----AAIGVLLRGQANIVTRVHCYNKA-----TAFGGIGILVKLA--D--AALTRID 321 (493)
Q Consensus 255 ~f~gtGI~l~gNd~~ItD~~i~s----a~~GI~v~gq~~ii~gvh~yN~~-----t~~GG~Gi~~~~~--~--~~~~rI~ 321 (493)
.|.|+ .+|+.++|+++.+.. +..|.+ .| +|+++++.|.. ...|.++=++... + .....|.
T Consensus 97 ~F~G~---FDG~ghtI~nL~i~~~~~~GLFg~i-~g---~I~Nl~l~~~~i~g~~~~~G~laG~vg~~~~g~~~n~gtI~ 169 (363)
T 3n6z_A 97 PYEID---FDGDSHVIKNFKCSAGDYPSFFGVL-CG---DCRNVGFVNASVSSARQGIGIITGYLGLKDKGNGNKTGRIV 169 (363)
T ss_dssp CCCEE---EEEEEEEEESCEECSSSSCSSSSEE-CE---EEEEEEEEEEEEECSSSCEESSEEEESCSSCSSGGGCEEEE
T ss_pred ceEEE---ECCCCeEEeeeEcCCCCceeEEEEe-eE---EEEEEEEEeeeEeccceecceeeeeecccccccccCceEEE
Confidence 46663 667777888877753 345544 22 57777766532 1122222232210 0 0357899
Q ss_pred ccccccc--------eeeeeCC-----eeEEEEceeeee
Q 011125 322 NCYLDYT--------GIVLEDP-----VQVHVTNGFFLG 347 (493)
Q Consensus 322 ncyldy~--------~iv~~d~-----~~~~It~~~flg 347 (493)
|||..-+ +|+.... ....|++|.+.+
T Consensus 170 Nc~~tGsV~G~~~vGGIVG~~~g~~~~~~g~I~nC~~~g 208 (363)
T 3n6z_A 170 NCYTTGEVIGSGAAGGIAGVLANSYDGQESYIKNCYSNA 208 (363)
T ss_dssp SCEEEEEEEESSCEESSEEEECCCBTTBCCEEEEEEECC
T ss_pred EeEEeeeEEeeeecceEEeecccccccCceEEEeEEEEE
Confidence 9976543 3333321 346677776654
Done!