BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 011130
(493 letters)
Database: pdbaa
62,578 sequences; 14,973,337 total letters
Searching..................................................done
>pdb|1AG8|A Chain A, Aldehyde Dehydrogenase From Bovine Mitochondria
pdb|1AG8|B Chain B, Aldehyde Dehydrogenase From Bovine Mitochondria
pdb|1AG8|C Chain C, Aldehyde Dehydrogenase From Bovine Mitochondria
pdb|1AG8|D Chain D, Aldehyde Dehydrogenase From Bovine Mitochondria
pdb|1A4Z|A Chain A, Aldehyde Dehydrogenase From Bovine Mitochondria Complex
With Nad (Reduced) And Samarium (Iii)
pdb|1A4Z|B Chain B, Aldehyde Dehydrogenase From Bovine Mitochondria Complex
With Nad (Reduced) And Samarium (Iii)
pdb|1A4Z|C Chain C, Aldehyde Dehydrogenase From Bovine Mitochondria Complex
With Nad (Reduced) And Samarium (Iii)
pdb|1A4Z|D Chain D, Aldehyde Dehydrogenase From Bovine Mitochondria Complex
With Nad (Reduced) And Samarium (Iii)
Length = 499
Score = 483 bits (1244), Expect = e-137, Method: Compositional matrix adjust.
Identities = 246/476 (51%), Positives = 308/476 (64%), Gaps = 54/476 (11%)
Query: 62 KVDYTQLLINGQFVDSASGKTFPTLDPRTGDVITHVAEGEAEDVNRAVSAARKAFDEG-P 120
+V Y Q+ IN ++ D+ S KTFPT++P TGDVI HVAEG+ DV+RAV AAR AF G P
Sbjct: 15 EVLYNQIFINNEWHDAVSKKTFPTVNPSTGDVICHVAEGDKADVDRAVKAARAAFQLGSP 74
Query: 121 WPRMTAYERSKIILRFADLLERHNDEIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGW 180
W RM A ER +++ R ADL+ER +AALET DNGKP+ S ++ M + RYYAGW
Sbjct: 75 WRRMDASERGRLLNRLADLIERDRTYLAALETLDNGKPYIISYLVDLDMVLKCLRYYAGW 134
Query: 181 ADKIQGLTAPADGPYHVQTLHEPIGVAG-------------------------------- 208
ADK G T P DG Y T HEP+GV G
Sbjct: 135 ADKYHGKTIPIDGDYFSYTRHEPVGVCGQIIPWNFPLLMQAWKLGPALATGNVVVMKVAE 194
Query: 209 ---------------------VLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQ 247
V+N++ G+GPTAGAA+ASH +VDK+AFTGST G ++
Sbjct: 195 QTPLTALYVANLIKEAGFPPGVVNVIPGFGPTAGAAIASHEDVDKVAFTGSTEVGHLIQV 254
Query: 248 LAAKSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVY 307
A KSNLK VTLE+GGKSP I+ DAD+D A E AH+ALFFNQGQCCCAGSRTFV E +Y
Sbjct: 255 AAGKSNLKRVTLEIGGKSPNIIMSDADMDWAVEQAHFALFFNQGQCCCAGSRTFVQEDIY 314
Query: 308 DQFVEKANALAMKRVVGDPFKGGIQQGPQIDSEQFEKILKYIRSGVDGGAKLETGGERLG 367
+FVE++ A A RVVG+PF +QGPQ+D QF+K+L YI+SG + G KL GG
Sbjct: 315 AEFVERSVARAKSRVVGNPFDSRTEQGPQVDETQFKKVLGYIKSGKEEGLKLLCGGGAAA 374
Query: 368 AKGYYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYKDLDEVIQRSNASQYGLAAGVFTHN 427
+GY+I+PTVF ++D M IAK+EIFGPV ILK+K ++EV+ R+N S+YGLAA VFT +
Sbjct: 375 DRGYFIQPTVFGDLQDGMTIAKEEIFGPVMQILKFKSMEEVVGRANNSKYGLAAAVFTKD 434
Query: 428 LDTANTLMRALRVGSVWINCFDVFDAAIPFGGYKQSGQGREKGSYSLSNYLQVKAV 483
LD AN L +AL+ G+VW+NC+DVF A PFGGYK SG GRE G Y L Y +VK V
Sbjct: 435 LDKANYLSQALQAGTVWVNCYDVFGAQSPFGGYKLSGSGRELGEYGLQAYTEVKTV 490
>pdb|1O05|A Chain A, Apo Form Of Human Mitochondrial Aldehyde Dehydrogenase
pdb|1O05|B Chain B, Apo Form Of Human Mitochondrial Aldehyde Dehydrogenase
pdb|1O05|C Chain C, Apo Form Of Human Mitochondrial Aldehyde Dehydrogenase
pdb|1O05|D Chain D, Apo Form Of Human Mitochondrial Aldehyde Dehydrogenase
pdb|1O05|E Chain E, Apo Form Of Human Mitochondrial Aldehyde Dehydrogenase
pdb|1O05|F Chain F, Apo Form Of Human Mitochondrial Aldehyde Dehydrogenase
pdb|1O05|G Chain G, Apo Form Of Human Mitochondrial Aldehyde Dehydrogenase
pdb|1O05|H Chain H, Apo Form Of Human Mitochondrial Aldehyde Dehydrogenase
pdb|1NZX|A Chain A, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Nad+ In The Presence Of Low Mg2+
pdb|1NZX|B Chain B, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Nad+ In The Presence Of Low Mg2+
pdb|1NZX|C Chain C, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Nad+ In The Presence Of Low Mg2+
pdb|1NZX|D Chain D, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Nad+ In The Presence Of Low Mg2+
pdb|1NZX|E Chain E, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Nad+ In The Presence Of Low Mg2+
pdb|1NZX|F Chain F, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Nad+ In The Presence Of Low Mg2+
pdb|1NZX|G Chain G, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Nad+ In The Presence Of Low Mg2+
pdb|1NZX|H Chain H, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Nad+ In The Presence Of Low Mg2+
pdb|1NZZ|A Chain A, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Nadh In The Presence Of Low Mg2+
pdb|1NZZ|B Chain B, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Nadh In The Presence Of Low Mg2+
pdb|1NZZ|C Chain C, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Nadh In The Presence Of Low Mg2+
pdb|1NZZ|D Chain D, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Nadh In The Presence Of Low Mg2+
pdb|1NZZ|E Chain E, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Nadh In The Presence Of Low Mg2+
pdb|1NZZ|F Chain F, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Nadh In The Presence Of Low Mg2+
pdb|1NZZ|G Chain G, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Nadh In The Presence Of Low Mg2+
pdb|1NZZ|H Chain H, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Nadh In The Presence Of Low Mg2+
pdb|1O00|A Chain A, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Nad+ And Mg2+ Showing Dual Nad(H) Conformations
pdb|1O00|B Chain B, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Nad+ And Mg2+ Showing Dual Nad(H) Conformations
pdb|1O00|C Chain C, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Nad+ And Mg2+ Showing Dual Nad(H) Conformations
pdb|1O00|D Chain D, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Nad+ And Mg2+ Showing Dual Nad(H) Conformations
pdb|1O00|E Chain E, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Nad+ And Mg2+ Showing Dual Nad(H) Conformations
pdb|1O00|F Chain F, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Nad+ And Mg2+ Showing Dual Nad(H) Conformations
pdb|1O00|G Chain G, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Nad+ And Mg2+ Showing Dual Nad(H) Conformations
pdb|1O00|H Chain H, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Nad+ And Mg2+ Showing Dual Nad(H) Conformations
pdb|1O01|A Chain A, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Crotonaldehyde, Nad(H) And Mg2+
pdb|1O01|B Chain B, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Crotonaldehyde, Nad(H) And Mg2+
pdb|1O01|C Chain C, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Crotonaldehyde, Nad(H) And Mg2+
pdb|1O01|D Chain D, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Crotonaldehyde, Nad(H) And Mg2+
pdb|1O01|E Chain E, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Crotonaldehyde, Nad(H) And Mg2+
pdb|1O01|F Chain F, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Crotonaldehyde, Nad(H) And Mg2+
pdb|1O01|G Chain G, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Crotonaldehyde, Nad(H) And Mg2+
pdb|1O01|H Chain H, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Crotonaldehyde, Nad(H) And Mg2+
pdb|1O02|A Chain A, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Nadh In The Presence Of Mg2+
pdb|1O02|B Chain B, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Nadh In The Presence Of Mg2+
pdb|1O02|C Chain C, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Nadh In The Presence Of Mg2+
pdb|1O02|D Chain D, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Nadh In The Presence Of Mg2+
pdb|1O02|E Chain E, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Nadh In The Presence Of Mg2+
pdb|1O02|F Chain F, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Nadh In The Presence Of Mg2+
pdb|1O02|G Chain G, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Nadh In The Presence Of Mg2+
pdb|1O02|H Chain H, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Nadh In The Presence Of Mg2+
pdb|3INJ|A Chain A, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Agonist Alda-1
pdb|3INJ|B Chain B, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Agonist Alda-1
pdb|3INJ|C Chain C, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Agonist Alda-1
pdb|3INJ|D Chain D, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Agonist Alda-1
pdb|3INJ|E Chain E, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Agonist Alda-1
pdb|3INJ|F Chain F, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Agonist Alda-1
pdb|3INJ|G Chain G, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Agonist Alda-1
pdb|3INJ|H Chain H, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Agonist Alda-1
pdb|3SZ9|A Chain A, Crystal Structure Of Human Aldh2 Modified With The
Beta-Elimination Product Of Aldi-3;
1-(4-Ethylbenzene)prop-2-En-1-One
pdb|3SZ9|B Chain B, Crystal Structure Of Human Aldh2 Modified With The
Beta-Elimination Product Of Aldi-3;
1-(4-Ethylbenzene)prop-2-En-1-One
pdb|3SZ9|C Chain C, Crystal Structure Of Human Aldh2 Modified With The
Beta-Elimination Product Of Aldi-3;
1-(4-Ethylbenzene)prop-2-En-1-One
pdb|3SZ9|D Chain D, Crystal Structure Of Human Aldh2 Modified With The
Beta-Elimination Product Of Aldi-3;
1-(4-Ethylbenzene)prop-2-En-1-One
pdb|3SZ9|E Chain E, Crystal Structure Of Human Aldh2 Modified With The
Beta-Elimination Product Of Aldi-3;
1-(4-Ethylbenzene)prop-2-En-1-One
pdb|3SZ9|F Chain F, Crystal Structure Of Human Aldh2 Modified With The
Beta-Elimination Product Of Aldi-3;
1-(4-Ethylbenzene)prop-2-En-1-One
pdb|3SZ9|G Chain G, Crystal Structure Of Human Aldh2 Modified With The
Beta-Elimination Product Of Aldi-3;
1-(4-Ethylbenzene)prop-2-En-1-One
pdb|3SZ9|H Chain H, Crystal Structure Of Human Aldh2 Modified With The
Beta-Elimination Product Of Aldi-3;
1-(4-Ethylbenzene)prop-2-En-1-One
pdb|4FQF|A Chain A, Crystal Structure Of A Thionitrate Intermediate Of Human
Aldehyde Dehydrogenase-2
pdb|4FQF|B Chain B, Crystal Structure Of A Thionitrate Intermediate Of Human
Aldehyde Dehydrogenase-2
pdb|4FQF|C Chain C, Crystal Structure Of A Thionitrate Intermediate Of Human
Aldehyde Dehydrogenase-2
pdb|4FQF|D Chain D, Crystal Structure Of A Thionitrate Intermediate Of Human
Aldehyde Dehydrogenase-2
Length = 500
Score = 478 bits (1229), Expect = e-135, Method: Compositional matrix adjust.
Identities = 245/476 (51%), Positives = 304/476 (63%), Gaps = 54/476 (11%)
Query: 66 TQLLINGQFVDSASGKTFPTLDPRTGDVITHVAEGEAEDVNRAVSAARKAFDEG-PWPRM 124
Q+ IN ++ D+ S KTFPT++P TG+VI VAEG+ EDV++AV AAR AF G PW RM
Sbjct: 20 NQIFINNEWHDAVSRKTFPTVNPSTGEVICQVAEGDKEDVDKAVKAARAAFQLGSPWRRM 79
Query: 125 TAYERSKIILRFADLLERHNDEIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADKI 184
A R +++ R ADL+ER +AALET DNGKP+ S ++ M + RYYAGWADK
Sbjct: 80 DASHRGRLLNRLADLIERDRTYLAALETLDNGKPYVISYLVDLDMVLKCLRYYAGWADKY 139
Query: 185 QGLTAPADGPYHVQTLHEPIGVAG------------------------------------ 208
G T P DG + T HEP+GV G
Sbjct: 140 HGKTIPIDGDFFSYTRHEPVGVCGQIIPWNFPLLMQAWKLGPALATGNVVVMKVAEQTPL 199
Query: 209 -----------------VLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLAAK 251
V+NIV G+GPTAGAA+ASH +VDK+AFTGST G+++ A
Sbjct: 200 TALYVANLIKEAGFPPGVVNIVPGFGPTAGAAIASHEDVDKVAFTGSTEIGRVIQVAAGS 259
Query: 252 SNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFV 311
SNLK VTLELGGKSP I+ DAD+D A E AH+ALFFNQGQCCCAGSRTFV E +YD+FV
Sbjct: 260 SNLKRVTLELGGKSPNIIMSDADMDWAVEQAHFALFFNQGQCCCAGSRTFVQEDIYDEFV 319
Query: 312 EKANALAMKRVVGDPFKGGIQQGPQIDSEQFEKILKYIRSGVDGGAKLETGGERLGAKGY 371
E++ A A RVVG+PF +QGPQ+D QF+KIL YI +G GAKL GG +GY
Sbjct: 320 ERSVARAKSRVVGNPFDSKTEQGPQVDETQFKKILGYINTGKQEGAKLLCGGGIAADRGY 379
Query: 372 YIKPTVFTGVKDDMLIAKDEIFGPVQSILKYKDLDEVIQRSNASQYGLAAGVFTHNLDTA 431
+I+PTVF V+D M IAK+EIFGPV ILK+K ++EV+ R+N S YGLAA VFT +LD A
Sbjct: 380 FIQPTVFGDVQDGMTIAKEEIFGPVMQILKFKTIEEVVGRANNSTYGLAAAVFTKDLDKA 439
Query: 432 NTLMRALRVGSVWINCFDVFDAAIPFGGYKQSGQGREKGSYSLSNYLQVKAVVTAL 487
N L +AL+ G+VW+NC+DVF A PFGGYK SG GRE G Y L Y +VK V +
Sbjct: 440 NYLSQALQAGTVWVNCYDVFGAQSPFGGYKMSGSGRELGEYGLQAYTEVKTVTVKV 495
>pdb|1CW3|A Chain A, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Nad+ And Mn2+
pdb|1CW3|B Chain B, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Nad+ And Mn2+
pdb|1CW3|C Chain C, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Nad+ And Mn2+
pdb|1CW3|D Chain D, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Nad+ And Mn2+
pdb|1CW3|E Chain E, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Nad+ And Mn2+
pdb|1CW3|F Chain F, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Nad+ And Mn2+
pdb|1CW3|G Chain G, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Nad+ And Mn2+
pdb|1CW3|H Chain H, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Nad+ And Mn2+
pdb|2VLE|A Chain A, The Structure Of Daidzin, A Naturally Occurring Anti
Alcohol-Addiction Agent, In Complex With Human
Mitochondrial Aldehyde Dehydrogenase
pdb|2VLE|B Chain B, The Structure Of Daidzin, A Naturally Occurring Anti
Alcohol-Addiction Agent, In Complex With Human
Mitochondrial Aldehyde Dehydrogenase
pdb|2VLE|C Chain C, The Structure Of Daidzin, A Naturally Occurring Anti
Alcohol-Addiction Agent, In Complex With Human
Mitochondrial Aldehyde Dehydrogenase
pdb|2VLE|D Chain D, The Structure Of Daidzin, A Naturally Occurring Anti
Alcohol-Addiction Agent, In Complex With Human
Mitochondrial Aldehyde Dehydrogenase
pdb|2VLE|E Chain E, The Structure Of Daidzin, A Naturally Occurring Anti
Alcohol-Addiction Agent, In Complex With Human
Mitochondrial Aldehyde Dehydrogenase
pdb|2VLE|F Chain F, The Structure Of Daidzin, A Naturally Occurring Anti
Alcohol-Addiction Agent, In Complex With Human
Mitochondrial Aldehyde Dehydrogenase
pdb|2VLE|G Chain G, The Structure Of Daidzin, A Naturally Occurring Anti
Alcohol-Addiction Agent, In Complex With Human
Mitochondrial Aldehyde Dehydrogenase
pdb|2VLE|H Chain H, The Structure Of Daidzin, A Naturally Occurring Anti
Alcohol-Addiction Agent, In Complex With Human
Mitochondrial Aldehyde Dehydrogenase
Length = 494
Score = 477 bits (1228), Expect = e-135, Method: Compositional matrix adjust.
Identities = 245/476 (51%), Positives = 304/476 (63%), Gaps = 54/476 (11%)
Query: 66 TQLLINGQFVDSASGKTFPTLDPRTGDVITHVAEGEAEDVNRAVSAARKAFDEG-PWPRM 124
Q+ IN ++ D+ S KTFPT++P TG+VI VAEG+ EDV++AV AAR AF G PW RM
Sbjct: 14 NQIFINNEWHDAVSRKTFPTVNPSTGEVICQVAEGDKEDVDKAVKAARAAFQLGSPWRRM 73
Query: 125 TAYERSKIILRFADLLERHNDEIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADKI 184
A R +++ R ADL+ER +AALET DNGKP+ S ++ M + RYYAGWADK
Sbjct: 74 DASHRGRLLNRLADLIERDRTYLAALETLDNGKPYVISYLVDLDMVLKCLRYYAGWADKY 133
Query: 185 QGLTAPADGPYHVQTLHEPIGVAG------------------------------------ 208
G T P DG + T HEP+GV G
Sbjct: 134 HGKTIPIDGDFFSYTRHEPVGVCGQIIPWNFPLLMQAWKLGPALATGNVVVMKVAEQTPL 193
Query: 209 -----------------VLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLAAK 251
V+NIV G+GPTAGAA+ASH +VDK+AFTGST G+++ A
Sbjct: 194 TALYVANLIKEAGFPPGVVNIVPGFGPTAGAAIASHEDVDKVAFTGSTEIGRVIQVAAGS 253
Query: 252 SNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFV 311
SNLK VTLELGGKSP I+ DAD+D A E AH+ALFFNQGQCCCAGSRTFV E +YD+FV
Sbjct: 254 SNLKRVTLELGGKSPNIIMSDADMDWAVEQAHFALFFNQGQCCCAGSRTFVQEDIYDEFV 313
Query: 312 EKANALAMKRVVGDPFKGGIQQGPQIDSEQFEKILKYIRSGVDGGAKLETGGERLGAKGY 371
E++ A A RVVG+PF +QGPQ+D QF+KIL YI +G GAKL GG +GY
Sbjct: 314 ERSVARAKSRVVGNPFDSKTEQGPQVDETQFKKILGYINTGKQEGAKLLCGGGIAADRGY 373
Query: 372 YIKPTVFTGVKDDMLIAKDEIFGPVQSILKYKDLDEVIQRSNASQYGLAAGVFTHNLDTA 431
+I+PTVF V+D M IAK+EIFGPV ILK+K ++EV+ R+N S YGLAA VFT +LD A
Sbjct: 374 FIQPTVFGDVQDGMTIAKEEIFGPVMQILKFKTIEEVVGRANNSTYGLAAAVFTKDLDKA 433
Query: 432 NTLMRALRVGSVWINCFDVFDAAIPFGGYKQSGQGREKGSYSLSNYLQVKAVVTAL 487
N L +AL+ G+VW+NC+DVF A PFGGYK SG GRE G Y L Y +VK V +
Sbjct: 434 NYLSQALQAGTVWVNCYDVFGAQSPFGGYKMSGSGRELGEYGLQAYTEVKTVTVKV 489
>pdb|2ONN|A Chain A, Arg475gln Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase, Apo Form
pdb|2ONN|B Chain B, Arg475gln Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase, Apo Form
pdb|2ONN|C Chain C, Arg475gln Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase, Apo Form
pdb|2ONN|D Chain D, Arg475gln Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase, Apo Form
pdb|2ONN|E Chain E, Arg475gln Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase, Apo Form
pdb|2ONN|F Chain F, Arg475gln Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase, Apo Form
pdb|2ONN|G Chain G, Arg475gln Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase, Apo Form
pdb|2ONN|H Chain H, Arg475gln Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase, Apo Form
pdb|2ONO|A Chain A, Arg475gln Mutant Of Mitochondrial Aldehyde Dehydrogenase,
Apo Form, Pseudo-Merohedrally Twinned
pdb|2ONO|B Chain B, Arg475gln Mutant Of Mitochondrial Aldehyde Dehydrogenase,
Apo Form, Pseudo-Merohedrally Twinned
pdb|2ONO|C Chain C, Arg475gln Mutant Of Mitochondrial Aldehyde Dehydrogenase,
Apo Form, Pseudo-Merohedrally Twinned
pdb|2ONO|D Chain D, Arg475gln Mutant Of Mitochondrial Aldehyde Dehydrogenase,
Apo Form, Pseudo-Merohedrally Twinned
pdb|2ONO|E Chain E, Arg475gln Mutant Of Mitochondrial Aldehyde Dehydrogenase,
Apo Form, Pseudo-Merohedrally Twinned
pdb|2ONO|F Chain F, Arg475gln Mutant Of Mitochondrial Aldehyde Dehydrogenase,
Apo Form, Pseudo-Merohedrally Twinned
pdb|2ONO|G Chain G, Arg475gln Mutant Of Mitochondrial Aldehyde Dehydrogenase,
Apo Form, Pseudo-Merohedrally Twinned
pdb|2ONO|H Chain H, Arg475gln Mutant Of Mitochondrial Aldehyde Dehydrogenase,
Apo Form, Pseudo-Merohedrally Twinned
pdb|2ONP|A Chain A, Arg475gln Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase, Complexed With Nad+
pdb|2ONP|B Chain B, Arg475gln Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase, Complexed With Nad+
pdb|2ONP|C Chain C, Arg475gln Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase, Complexed With Nad+
pdb|2ONP|D Chain D, Arg475gln Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase, Complexed With Nad+
pdb|2ONP|E Chain E, Arg475gln Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase, Complexed With Nad+
pdb|2ONP|F Chain F, Arg475gln Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase, Complexed With Nad+
pdb|2ONP|G Chain G, Arg475gln Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase, Complexed With Nad+
pdb|2ONP|H Chain H, Arg475gln Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase, Complexed With Nad+
Length = 500
Score = 476 bits (1224), Expect = e-134, Method: Compositional matrix adjust.
Identities = 244/476 (51%), Positives = 304/476 (63%), Gaps = 54/476 (11%)
Query: 66 TQLLINGQFVDSASGKTFPTLDPRTGDVITHVAEGEAEDVNRAVSAARKAFDEG-PWPRM 124
Q+ IN ++ D+ S KTFPT++P TG+VI VAEG+ EDV++AV AAR AF G PW RM
Sbjct: 20 NQIFINNEWHDAVSRKTFPTVNPSTGEVICQVAEGDKEDVDKAVKAARAAFQLGSPWRRM 79
Query: 125 TAYERSKIILRFADLLERHNDEIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADKI 184
A R +++ R ADL+ER +AALET DNGKP+ S ++ M + RYYAGWADK
Sbjct: 80 DASHRGRLLNRLADLIERDRTYLAALETLDNGKPYVISYLVDLDMVLKCLRYYAGWADKY 139
Query: 185 QGLTAPADGPYHVQTLHEPIGVAG------------------------------------ 208
G T P DG + T HEP+GV G
Sbjct: 140 HGKTIPIDGDFFSYTRHEPVGVCGQIIPWNFPLLMQAWKLGPALATGNVVVMKVAEQTPL 199
Query: 209 -----------------VLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLAAK 251
V+NIV G+GPTAGAA+ASH +VDK+AFTGST G+++ A
Sbjct: 200 TALYVANLIKEAGFPPGVVNIVPGFGPTAGAAIASHEDVDKVAFTGSTEIGRVIQVAAGS 259
Query: 252 SNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFV 311
SNLK VTLELGGKSP I+ DAD+D A E AH+ALFFNQGQCCCAGSRTFV E +YD+FV
Sbjct: 260 SNLKRVTLELGGKSPNIIMSDADMDWAVEQAHFALFFNQGQCCCAGSRTFVQEDIYDEFV 319
Query: 312 EKANALAMKRVVGDPFKGGIQQGPQIDSEQFEKILKYIRSGVDGGAKLETGGERLGAKGY 371
E++ A A RVVG+PF +QGPQ+D QF+KIL YI +G GAKL GG +GY
Sbjct: 320 ERSVARAKSRVVGNPFDSKTEQGPQVDETQFKKILGYINTGKQEGAKLLCGGGIAADRGY 379
Query: 372 YIKPTVFTGVKDDMLIAKDEIFGPVQSILKYKDLDEVIQRSNASQYGLAAGVFTHNLDTA 431
+I+PTVF V+D M IAK+EIFGPV ILK+K ++EV+ R+N S YGLAA VFT +LD A
Sbjct: 380 FIQPTVFGDVQDGMTIAKEEIFGPVMQILKFKTIEEVVGRANNSTYGLAAAVFTKDLDKA 439
Query: 432 NTLMRALRVGSVWINCFDVFDAAIPFGGYKQSGQGREKGSYSLSNYLQVKAVVTAL 487
N L +AL+ G+VW+NC+DVF A PFGGYK SG G+E G Y L Y +VK V +
Sbjct: 440 NYLSQALQAGTVWVNCYDVFGAQSPFGGYKMSGSGQELGEYGLQAYTEVKTVTVKV 495
>pdb|3N81|A Chain A, T244a Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase, Apo Form
pdb|3N81|B Chain B, T244a Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase, Apo Form
pdb|3N81|C Chain C, T244a Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase, Apo Form
pdb|3N81|D Chain D, T244a Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase, Apo Form
pdb|3N81|E Chain E, T244a Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase, Apo Form
pdb|3N81|F Chain F, T244a Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase, Apo Form
pdb|3N81|G Chain G, T244a Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase, Apo Form
pdb|3N81|H Chain H, T244a Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase, Apo Form
pdb|3N82|A Chain A, T244a Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase, Nadh Complex
pdb|3N82|B Chain B, T244a Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase, Nadh Complex
pdb|3N82|C Chain C, T244a Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase, Nadh Complex
pdb|3N82|D Chain D, T244a Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase, Nadh Complex
pdb|3N82|E Chain E, T244a Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase, Nadh Complex
pdb|3N82|F Chain F, T244a Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase, Nadh Complex
pdb|3N82|G Chain G, T244a Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase, Nadh Complex
pdb|3N82|H Chain H, T244a Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase, Nadh Complex
pdb|3N83|A Chain A, T244a Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase, Nad Complex
pdb|3N83|B Chain B, T244a Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase, Nad Complex
pdb|3N83|C Chain C, T244a Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase, Nad Complex
pdb|3N83|D Chain D, T244a Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase, Nad Complex
pdb|3N83|E Chain E, T244a Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase, Nad Complex
pdb|3N83|F Chain F, T244a Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase, Nad Complex
pdb|3N83|G Chain G, T244a Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase, Nad Complex
pdb|3N83|H Chain H, T244a Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase, Nad Complex
Length = 500
Score = 475 bits (1223), Expect = e-134, Method: Compositional matrix adjust.
Identities = 244/476 (51%), Positives = 303/476 (63%), Gaps = 54/476 (11%)
Query: 66 TQLLINGQFVDSASGKTFPTLDPRTGDVITHVAEGEAEDVNRAVSAARKAFDEG-PWPRM 124
Q+ IN ++ D+ S KTFPT++P TG+VI VAEG+ EDV++AV AAR AF G PW RM
Sbjct: 20 NQIFINNEWHDAVSRKTFPTVNPSTGEVICQVAEGDKEDVDKAVKAARAAFQLGSPWRRM 79
Query: 125 TAYERSKIILRFADLLERHNDEIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADKI 184
A R +++ R ADL+ER +AALET DNGKP+ S ++ M + RYYAGWADK
Sbjct: 80 DASHRGRLLNRLADLIERDRTYLAALETLDNGKPYVISYLVDLDMVLKCLRYYAGWADKY 139
Query: 185 QGLTAPADGPYHVQTLHEPIGVAG------------------------------------ 208
G T P DG + T HEP+GV G
Sbjct: 140 HGKTIPIDGDFFSYTRHEPVGVCGQIIPWNFPLLMQAWKLGPALATGNVVVMKVAEQTPL 199
Query: 209 -----------------VLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLAAK 251
V+NIV G+GPTAGAA+ASH +VDK+AF GST G+++ A
Sbjct: 200 TALYVANLIKEAGFPPGVVNIVPGFGPTAGAAIASHEDVDKVAFAGSTEIGRVIQVAAGS 259
Query: 252 SNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFV 311
SNLK VTLELGGKSP I+ DAD+D A E AH+ALFFNQGQCCCAGSRTFV E +YD+FV
Sbjct: 260 SNLKRVTLELGGKSPNIIMSDADMDWAVEQAHFALFFNQGQCCCAGSRTFVQEDIYDEFV 319
Query: 312 EKANALAMKRVVGDPFKGGIQQGPQIDSEQFEKILKYIRSGVDGGAKLETGGERLGAKGY 371
E++ A A RVVG+PF +QGPQ+D QF+KIL YI +G GAKL GG +GY
Sbjct: 320 ERSVARAKSRVVGNPFDSKTEQGPQVDETQFKKILGYINTGKQEGAKLLCGGGIAADRGY 379
Query: 372 YIKPTVFTGVKDDMLIAKDEIFGPVQSILKYKDLDEVIQRSNASQYGLAAGVFTHNLDTA 431
+I+PTVF V+D M IAK+EIFGPV ILK+K ++EV+ R+N S YGLAA VFT +LD A
Sbjct: 380 FIQPTVFGDVQDGMTIAKEEIFGPVMQILKFKTIEEVVGRANNSTYGLAAAVFTKDLDKA 439
Query: 432 NTLMRALRVGSVWINCFDVFDAAIPFGGYKQSGQGREKGSYSLSNYLQVKAVVTAL 487
N L +AL+ G+VW+NC+DVF A PFGGYK SG GRE G Y L Y +VK V +
Sbjct: 440 NYLSQALQAGTVWVNCYDVFGAQSPFGGYKMSGSGRELGEYGLQAYTEVKTVTVKV 495
>pdb|1NZW|A Chain A, Cys302ser Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase Complexed With Nadh And Mg2+
pdb|1NZW|B Chain B, Cys302ser Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase Complexed With Nadh And Mg2+
pdb|1NZW|C Chain C, Cys302ser Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase Complexed With Nadh And Mg2+
pdb|1NZW|D Chain D, Cys302ser Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase Complexed With Nadh And Mg2+
pdb|1NZW|E Chain E, Cys302ser Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase Complexed With Nadh And Mg2+
pdb|1NZW|F Chain F, Cys302ser Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase Complexed With Nadh And Mg2+
pdb|1NZW|G Chain G, Cys302ser Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase Complexed With Nadh And Mg2+
pdb|1NZW|H Chain H, Cys302ser Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase Complexed With Nadh And Mg2+
pdb|1O04|A Chain A, Cys302ser Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase Complexed With Nad+ And Mg2+
pdb|1O04|B Chain B, Cys302ser Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase Complexed With Nad+ And Mg2+
pdb|1O04|C Chain C, Cys302ser Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase Complexed With Nad+ And Mg2+
pdb|1O04|D Chain D, Cys302ser Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase Complexed With Nad+ And Mg2+
pdb|1O04|E Chain E, Cys302ser Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase Complexed With Nad+ And Mg2+
pdb|1O04|F Chain F, Cys302ser Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase Complexed With Nad+ And Mg2+
pdb|1O04|G Chain G, Cys302ser Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase Complexed With Nad+ And Mg2+
pdb|1O04|H Chain H, Cys302ser Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase Complexed With Nad+ And Mg2+
Length = 500
Score = 473 bits (1218), Expect = e-134, Method: Compositional matrix adjust.
Identities = 244/476 (51%), Positives = 303/476 (63%), Gaps = 54/476 (11%)
Query: 66 TQLLINGQFVDSASGKTFPTLDPRTGDVITHVAEGEAEDVNRAVSAARKAFDEG-PWPRM 124
Q+ IN ++ D+ S KTFPT++P TG+VI VAEG+ EDV++AV AAR AF G PW RM
Sbjct: 20 NQIFINNEWHDAVSRKTFPTVNPSTGEVICQVAEGDKEDVDKAVKAARAAFQLGSPWRRM 79
Query: 125 TAYERSKIILRFADLLERHNDEIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADKI 184
A R +++ R ADL+ER +AALET DNGKP+ S ++ M + RYYAGWADK
Sbjct: 80 DASHRGRLLNRLADLIERDRTYLAALETLDNGKPYVISYLVDLDMVLKCLRYYAGWADKY 139
Query: 185 QGLTAPADGPYHVQTLHEPIGVAG------------------------------------ 208
G T P DG + T HEP+GV G
Sbjct: 140 HGKTIPIDGDFFSYTRHEPVGVCGQIIPWNFPLLMQAWKLGPALATGNVVVMKVAEQTPL 199
Query: 209 -----------------VLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLAAK 251
V+NIV G+GPTAGAA+ASH +VDK+AFTGST G+++ A
Sbjct: 200 TALYVANLIKEAGFPPGVVNIVPGFGPTAGAAIASHEDVDKVAFTGSTEIGRVIQVAAGS 259
Query: 252 SNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFV 311
SNLK VTLELGGKSP I+ DAD+D A E AH+ALFFNQGQC CAGSRTFV E +YD+FV
Sbjct: 260 SNLKRVTLELGGKSPNIIMSDADMDWAVEQAHFALFFNQGQCSCAGSRTFVQEDIYDEFV 319
Query: 312 EKANALAMKRVVGDPFKGGIQQGPQIDSEQFEKILKYIRSGVDGGAKLETGGERLGAKGY 371
E++ A A RVVG+PF +QGPQ+D QF+KIL YI +G GAKL GG +GY
Sbjct: 320 ERSVARAKSRVVGNPFDSKTEQGPQVDETQFKKILGYINTGKQEGAKLLCGGGIAADRGY 379
Query: 372 YIKPTVFTGVKDDMLIAKDEIFGPVQSILKYKDLDEVIQRSNASQYGLAAGVFTHNLDTA 431
+I+PTVF V+D M IAK+EIFGPV ILK+K ++EV+ R+N S YGLAA VFT +LD A
Sbjct: 380 FIQPTVFGDVQDGMTIAKEEIFGPVMQILKFKTIEEVVGRANNSTYGLAAAVFTKDLDKA 439
Query: 432 NTLMRALRVGSVWINCFDVFDAAIPFGGYKQSGQGREKGSYSLSNYLQVKAVVTAL 487
N L +AL+ G+VW+NC+DVF A PFGGYK SG GRE G Y L Y +VK V +
Sbjct: 440 NYLSQALQAGTVWVNCYDVFGAQSPFGGYKMSGSGRELGEYGLQAYTEVKTVTVKV 495
>pdb|3N80|A Chain A, Human Mitochondrial Aldehyde Dehydrogenase, Apo Form
pdb|3N80|B Chain B, Human Mitochondrial Aldehyde Dehydrogenase, Apo Form
pdb|3N80|C Chain C, Human Mitochondrial Aldehyde Dehydrogenase, Apo Form
pdb|3N80|D Chain D, Human Mitochondrial Aldehyde Dehydrogenase, Apo Form
pdb|3N80|E Chain E, Human Mitochondrial Aldehyde Dehydrogenase, Apo Form
pdb|3N80|F Chain F, Human Mitochondrial Aldehyde Dehydrogenase, Apo Form
pdb|3N80|G Chain G, Human Mitochondrial Aldehyde Dehydrogenase, Apo Form
pdb|3N80|H Chain H, Human Mitochondrial Aldehyde Dehydrogenase, Apo Form
Length = 500
Score = 473 bits (1217), Expect = e-133, Method: Compositional matrix adjust.
Identities = 244/476 (51%), Positives = 303/476 (63%), Gaps = 54/476 (11%)
Query: 66 TQLLINGQFVDSASGKTFPTLDPRTGDVITHVAEGEAEDVNRAVSAARKAFDEG-PWPRM 124
Q+ IN ++ D+ S KTFPT++P TG+VI VAEG+ EDV++AV AAR AF G PW RM
Sbjct: 20 NQIFINNEWHDAVSRKTFPTVNPSTGEVICQVAEGDKEDVDKAVKAARAAFQLGSPWRRM 79
Query: 125 TAYERSKIILRFADLLERHNDEIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADKI 184
A R +++ R ADL+ER +AALET DNGKP+ S ++ M + RYYAGWADK
Sbjct: 80 DASHRGRLLNRLADLIERDRTYLAALETLDNGKPYVISYLVDLDMVLKCLRYYAGWADKY 139
Query: 185 QGLTAPADGPYHVQTLHEPIGVAG------------------------------------ 208
G T P DG + T HEP+GV G
Sbjct: 140 HGKTIPIDGDFFSYTRHEPVGVCGQIIPWNFPLLMQAWKLGPALATGNVVVMKVAEQTPL 199
Query: 209 -----------------VLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLAAK 251
V+NIV G+GPTAGAA+ASH +VDK+AFTGST G+++ A
Sbjct: 200 TALYVANLIKEAGFPPGVVNIVPGFGPTAGAAIASHEDVDKVAFTGSTEIGRVIQVAAGS 259
Query: 252 SNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFV 311
SNLK VTLELGGKSP I+ DAD+D A E AH+ALFFNQGQC CAGSRTFV E +YD+FV
Sbjct: 260 SNLKRVTLELGGKSPNIIMSDADMDWAVEQAHFALFFNQGQCXCAGSRTFVQEDIYDEFV 319
Query: 312 EKANALAMKRVVGDPFKGGIQQGPQIDSEQFEKILKYIRSGVDGGAKLETGGERLGAKGY 371
E++ A A RVVG+PF +QGPQ+D QF+KIL YI +G GAKL GG +GY
Sbjct: 320 ERSVARAKSRVVGNPFDSKTEQGPQVDETQFKKILGYINTGKQEGAKLLCGGGIAADRGY 379
Query: 372 YIKPTVFTGVKDDMLIAKDEIFGPVQSILKYKDLDEVIQRSNASQYGLAAGVFTHNLDTA 431
+I+PTVF V+D M IAK+EIFGPV ILK+K ++EV+ R+N S YGLAA VFT +LD A
Sbjct: 380 FIQPTVFGDVQDGMTIAKEEIFGPVMQILKFKTIEEVVGRANNSTYGLAAAVFTKDLDKA 439
Query: 432 NTLMRALRVGSVWINCFDVFDAAIPFGGYKQSGQGREKGSYSLSNYLQVKAVVTAL 487
N L +AL+ G+VW+NC+DVF A PFGGYK SG GRE G Y L Y +VK V +
Sbjct: 440 NYLSQALQAGTVWVNCYDVFGAQSPFGGYKMSGSGRELGEYGLQAYTEVKTVTVKV 495
>pdb|1ZUM|A Chain A, Human Mitochondrial Aldehyde Dehydrogenase Asian Variant,
Aldh22, Apo Form
pdb|1ZUM|B Chain B, Human Mitochondrial Aldehyde Dehydrogenase Asian Variant,
Aldh22, Apo Form
pdb|1ZUM|C Chain C, Human Mitochondrial Aldehyde Dehydrogenase Asian Variant,
Aldh22, Apo Form
pdb|1ZUM|D Chain D, Human Mitochondrial Aldehyde Dehydrogenase Asian Variant,
Aldh22, Apo Form
pdb|1ZUM|E Chain E, Human Mitochondrial Aldehyde Dehydrogenase Asian Variant,
Aldh22, Apo Form
pdb|1ZUM|F Chain F, Human Mitochondrial Aldehyde Dehydrogenase Asian Variant,
Aldh22, Apo Form
pdb|1ZUM|G Chain G, Human Mitochondrial Aldehyde Dehydrogenase Asian Variant,
Aldh22, Apo Form
pdb|1ZUM|H Chain H, Human Mitochondrial Aldehyde Dehydrogenase Asian Variant,
Aldh22, Apo Form
pdb|1ZUM|I Chain I, Human Mitochondrial Aldehyde Dehydrogenase Asian Variant,
Aldh22, Apo Form
pdb|1ZUM|J Chain J, Human Mitochondrial Aldehyde Dehydrogenase Asian Variant,
Aldh22, Apo Form
pdb|1ZUM|K Chain K, Human Mitochondrial Aldehyde Dehydrogenase Asian Variant,
Aldh22, Apo Form
pdb|1ZUM|L Chain L, Human Mitochondrial Aldehyde Dehydrogenase Asian Variant,
Aldh22, Apo Form
pdb|2ONM|A Chain A, Human Mitochondrial Aldehyde Dehydrogenase Asian Variant,
Aldh22, Complexed With Nad+
pdb|2ONM|B Chain B, Human Mitochondrial Aldehyde Dehydrogenase Asian Variant,
Aldh22, Complexed With Nad+
pdb|2ONM|C Chain C, Human Mitochondrial Aldehyde Dehydrogenase Asian Variant,
Aldh22, Complexed With Nad+
pdb|2ONM|D Chain D, Human Mitochondrial Aldehyde Dehydrogenase Asian Variant,
Aldh22, Complexed With Nad+
pdb|2ONM|E Chain E, Human Mitochondrial Aldehyde Dehydrogenase Asian Variant,
Aldh22, Complexed With Nad+
pdb|2ONM|F Chain F, Human Mitochondrial Aldehyde Dehydrogenase Asian Variant,
Aldh22, Complexed With Nad+
pdb|2ONM|G Chain G, Human Mitochondrial Aldehyde Dehydrogenase Asian Variant,
Aldh22, Complexed With Nad+
pdb|2ONM|H Chain H, Human Mitochondrial Aldehyde Dehydrogenase Asian Variant,
Aldh22, Complexed With Nad+
pdb|2ONM|I Chain I, Human Mitochondrial Aldehyde Dehydrogenase Asian Variant,
Aldh22, Complexed With Nad+
pdb|2ONM|J Chain J, Human Mitochondrial Aldehyde Dehydrogenase Asian Variant,
Aldh22, Complexed With Nad+
pdb|2ONM|K Chain K, Human Mitochondrial Aldehyde Dehydrogenase Asian Variant,
Aldh22, Complexed With Nad+
pdb|2ONM|L Chain L, Human Mitochondrial Aldehyde Dehydrogenase Asian Variant,
Aldh22, Complexed With Nad+
Length = 500
Score = 471 bits (1213), Expect = e-133, Method: Compositional matrix adjust.
Identities = 242/466 (51%), Positives = 299/466 (64%), Gaps = 54/466 (11%)
Query: 66 TQLLINGQFVDSASGKTFPTLDPRTGDVITHVAEGEAEDVNRAVSAARKAFDEG-PWPRM 124
Q+ IN ++ D+ S KTFPT++P TG+VI VAEG+ EDV++AV AAR AF G PW RM
Sbjct: 20 NQIFINNEWHDAVSRKTFPTVNPSTGEVICQVAEGDKEDVDKAVKAARAAFQLGSPWRRM 79
Query: 125 TAYERSKIILRFADLLERHNDEIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADKI 184
A R +++ R ADL+ER +AALET DNGKP+ S ++ M + RYYAGWADK
Sbjct: 80 DASHRGRLLNRLADLIERDRTYLAALETLDNGKPYVISYLVDLDMVLKCLRYYAGWADKY 139
Query: 185 QGLTAPADGPYHVQTLHEPIGVAG------------------------------------ 208
G T P DG + T HEP+GV G
Sbjct: 140 HGKTIPIDGDFFSYTRHEPVGVCGQIIPWNFPLLMQAWKLGPALATGNVVVMKVAEQTPL 199
Query: 209 -----------------VLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLAAK 251
V+NIV G+GPTAGAA+ASH +VDK+AFTGST G+++ A
Sbjct: 200 TALYVANLIKEAGFPPGVVNIVPGFGPTAGAAIASHEDVDKVAFTGSTEIGRVIQVAAGS 259
Query: 252 SNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFV 311
SNLK VTLELGGKSP I+ DAD+D A E AH+ALFFNQGQCCCAGSRTFV E +YD+FV
Sbjct: 260 SNLKRVTLELGGKSPNIIMSDADMDWAVEQAHFALFFNQGQCCCAGSRTFVQEDIYDEFV 319
Query: 312 EKANALAMKRVVGDPFKGGIQQGPQIDSEQFEKILKYIRSGVDGGAKLETGGERLGAKGY 371
E++ A A RVVG+PF +QGPQ+D QF+KIL YI +G GAKL GG +GY
Sbjct: 320 ERSVARAKSRVVGNPFDSKTEQGPQVDETQFKKILGYINTGKQEGAKLLCGGGIAADRGY 379
Query: 372 YIKPTVFTGVKDDMLIAKDEIFGPVQSILKYKDLDEVIQRSNASQYGLAAGVFTHNLDTA 431
+I+PTVF V+D M IAK+EIFGPV ILK+K ++EV+ R+N S YGLAA VFT +LD A
Sbjct: 380 FIQPTVFGDVQDGMTIAKEEIFGPVMQILKFKTIEEVVGRANNSTYGLAAAVFTKDLDKA 439
Query: 432 NTLMRALRVGSVWINCFDVFDAAIPFGGYKQSGQGREKGSYSLSNY 477
N L +AL+ G+VW+NC+DVF A PFGGYK SG GRE G Y L Y
Sbjct: 440 NYLSQALQAGTVWVNCYDVFGAQSPFGGYKMSGSGRELGEYGLQAY 485
>pdb|4FR8|A Chain A, Crystal Structure Of Human Aldehyde Dehydrogenase-2 In
Complex With Nitroglycerin
pdb|4FR8|B Chain B, Crystal Structure Of Human Aldehyde Dehydrogenase-2 In
Complex With Nitroglycerin
pdb|4FR8|C Chain C, Crystal Structure Of Human Aldehyde Dehydrogenase-2 In
Complex With Nitroglycerin
pdb|4FR8|D Chain D, Crystal Structure Of Human Aldehyde Dehydrogenase-2 In
Complex With Nitroglycerin
pdb|4FR8|E Chain E, Crystal Structure Of Human Aldehyde Dehydrogenase-2 In
Complex With Nitroglycerin
pdb|4FR8|F Chain F, Crystal Structure Of Human Aldehyde Dehydrogenase-2 In
Complex With Nitroglycerin
pdb|4FR8|G Chain G, Crystal Structure Of Human Aldehyde Dehydrogenase-2 In
Complex With Nitroglycerin
pdb|4FR8|H Chain H, Crystal Structure Of Human Aldehyde Dehydrogenase-2 In
Complex With Nitroglycerin
Length = 500
Score = 468 bits (1205), Expect = e-132, Method: Compositional matrix adjust.
Identities = 242/476 (50%), Positives = 302/476 (63%), Gaps = 54/476 (11%)
Query: 66 TQLLINGQFVDSASGKTFPTLDPRTGDVITHVAEGEAEDVNRAVSAARKAFDEG-PWPRM 124
Q+ IN ++ D+ S KTFPT++P TG+VI VAEG+ EDV++AV AAR AF G PW RM
Sbjct: 20 NQIFINNEWHDAVSRKTFPTVNPSTGEVICQVAEGDKEDVDKAVKAARAAFQLGSPWRRM 79
Query: 125 TAYERSKIILRFADLLERHNDEIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADKI 184
A R +++ R ADL+ER +AALET DNGKP+ S ++ M + RYYAGWADK
Sbjct: 80 DASHRGRLLNRLADLIERDRTYLAALETLDNGKPYVISYLVDLDMVLKCLRYYAGWADKY 139
Query: 185 QGLTAPADGPYHVQTLHEPIGVAG------------------------------------ 208
G T P DG + T HEP+GV G
Sbjct: 140 HGKTIPIDGDFFSYTRHEPVGVCGQIIPWNFPLLMQAWKLGPALATGNVVVMKVAEQTPL 199
Query: 209 -----------------VLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLAAK 251
V+NIV G+GPTAGAA+ASH +VDK+AFTGST G+++ A
Sbjct: 200 TALYVANLIKEAGFPPGVVNIVPGFGPTAGAAIASHEDVDKVAFTGSTEIGRVIQVAAGS 259
Query: 252 SNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFV 311
SNLK VTL+LGGKSP I+ DAD+D A E AH+ALFFNQGQ C AGSRTFV E +YD+FV
Sbjct: 260 SNLKRVTLQLGGKSPNIIMSDADMDWAVEQAHFALFFNQGQSCSAGSRTFVQEDIYDEFV 319
Query: 312 EKANALAMKRVVGDPFKGGIQQGPQIDSEQFEKILKYIRSGVDGGAKLETGGERLGAKGY 371
E++ A A RVVG+PF +QGPQ+D QF+KIL YI +G GAKL GG +GY
Sbjct: 320 ERSVARAKSRVVGNPFDSKTEQGPQVDETQFKKILGYINTGKQEGAKLLCGGGIAADRGY 379
Query: 372 YIKPTVFTGVKDDMLIAKDEIFGPVQSILKYKDLDEVIQRSNASQYGLAAGVFTHNLDTA 431
+I+PTVF V+D M IAK+EIFGPV ILK+K ++EV+ R+N S YGLAA VFT +LD A
Sbjct: 380 FIQPTVFGDVQDGMTIAKEEIFGPVMQILKFKTIEEVVGRANNSTYGLAAAVFTKDLDKA 439
Query: 432 NTLMRALRVGSVWINCFDVFDAAIPFGGYKQSGQGREKGSYSLSNYLQVKAVVTAL 487
N L +AL+ G+VW+NC+DVF A PFGGYK SG GRE G Y L Y +VK V +
Sbjct: 440 NYLSQALQAGTVWVNCYDVFGAQSPFGGYKMSGSGRELGEYGLQAYTEVKTVTVKV 495
>pdb|3INL|A Chain A, Human Mitochondrial Aldehyde Dehydrogenase Asian Variant,
Aldh22, Complexed With Agonist Alda-1
pdb|3INL|B Chain B, Human Mitochondrial Aldehyde Dehydrogenase Asian Variant,
Aldh22, Complexed With Agonist Alda-1
pdb|3INL|C Chain C, Human Mitochondrial Aldehyde Dehydrogenase Asian Variant,
Aldh22, Complexed With Agonist Alda-1
pdb|3INL|D Chain D, Human Mitochondrial Aldehyde Dehydrogenase Asian Variant,
Aldh22, Complexed With Agonist Alda-1
pdb|3INL|E Chain E, Human Mitochondrial Aldehyde Dehydrogenase Asian Variant,
Aldh22, Complexed With Agonist Alda-1
pdb|3INL|F Chain F, Human Mitochondrial Aldehyde Dehydrogenase Asian Variant,
Aldh22, Complexed With Agonist Alda-1
pdb|3INL|G Chain G, Human Mitochondrial Aldehyde Dehydrogenase Asian Variant,
Aldh22, Complexed With Agonist Alda-1
pdb|3INL|H Chain H, Human Mitochondrial Aldehyde Dehydrogenase Asian Variant,
Aldh22, Complexed With Agonist Alda-1
Length = 500
Score = 468 bits (1203), Expect = e-132, Method: Compositional matrix adjust.
Identities = 241/466 (51%), Positives = 298/466 (63%), Gaps = 54/466 (11%)
Query: 66 TQLLINGQFVDSASGKTFPTLDPRTGDVITHVAEGEAEDVNRAVSAARKAFDEG-PWPRM 124
Q+ IN ++ D+ S KTFPT++P TG+VI VAEG+ EDV++AV AAR AF G PW RM
Sbjct: 20 NQIFINNEWHDAVSRKTFPTVNPSTGEVICQVAEGDKEDVDKAVKAARAAFQLGSPWRRM 79
Query: 125 TAYERSKIILRFADLLERHNDEIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADKI 184
A R +++ R ADL+ER +AALET DNGKP+ S ++ M + RYYAGWADK
Sbjct: 80 DASHRGRLLNRLADLIERDRTYLAALETLDNGKPYVISYLVDLDMVLKCLRYYAGWADKY 139
Query: 185 QGLTAPADGPYHVQTLHEPIGVAG------------------------------------ 208
G T P DG + T HEP+GV G
Sbjct: 140 HGKTIPIDGDFFSYTRHEPVGVCGQIIPWNFPLLMQAWKLGPALATGNVVVMKVAEQTPL 199
Query: 209 -----------------VLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLAAK 251
V+NIV G+GPTAGAA+ASH +VDK+AFTGST G+++ A
Sbjct: 200 TALYVANLIKEAGFPPGVVNIVPGFGPTAGAAIASHEDVDKVAFTGSTEIGRVIQVAAGS 259
Query: 252 SNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFV 311
SNLK VTLELGGKSP I+ DAD+D A E AH+ALFFNQGQC CAGSRTFV E +YD+FV
Sbjct: 260 SNLKRVTLELGGKSPNIIMSDADMDWAVEQAHFALFFNQGQCSCAGSRTFVQEDIYDEFV 319
Query: 312 EKANALAMKRVVGDPFKGGIQQGPQIDSEQFEKILKYIRSGVDGGAKLETGGERLGAKGY 371
E++ A A RVVG+PF +QGPQ+D QF+KIL YI +G GAKL GG +GY
Sbjct: 320 ERSVARAKSRVVGNPFDSKTEQGPQVDETQFKKILGYINTGKQEGAKLLCGGGIAADRGY 379
Query: 372 YIKPTVFTGVKDDMLIAKDEIFGPVQSILKYKDLDEVIQRSNASQYGLAAGVFTHNLDTA 431
+I+PTVF V+D M IAK+EIFGPV ILK+K ++EV+ R+N S YGLAA VFT +LD A
Sbjct: 380 FIQPTVFGDVQDGMTIAKEEIFGPVMQILKFKTIEEVVGRANNSTYGLAAAVFTKDLDKA 439
Query: 432 NTLMRALRVGSVWINCFDVFDAAIPFGGYKQSGQGREKGSYSLSNY 477
N L +AL+ G+VW+NC+DVF A PFGGYK SG GRE G Y L Y
Sbjct: 440 NYLSQALQAGTVWVNCYDVFGAQSPFGGYKMSGSGRELGEYGLQAY 485
>pdb|1BI9|A Chain A, Retinal Dehydrogenase Type Two With Nad Bound
pdb|1BI9|B Chain B, Retinal Dehydrogenase Type Two With Nad Bound
pdb|1BI9|C Chain C, Retinal Dehydrogenase Type Two With Nad Bound
pdb|1BI9|D Chain D, Retinal Dehydrogenase Type Two With Nad Bound
Length = 499
Score = 456 bits (1174), Expect = e-128, Method: Compositional matrix adjust.
Identities = 226/484 (46%), Positives = 309/484 (63%), Gaps = 54/484 (11%)
Query: 58 TPPVKVDYTQLLINGQFVDSASGKTFPTLDPRTGDVITHVAEGEAEDVNRAVSAARKAFD 117
TP +++ YT++ IN ++ +S SG+ FP +P TG+ + V E + D+++AV AAR AF
Sbjct: 11 TPNLEIKYTKIFINNEWQNSESGRVFPVCNPATGEQVCEVQEADKVDIDKAVQAARLAFS 70
Query: 118 EGP-WPRMTAYERSKIILRFADLLERHNDEIAALETWDNGKPFEQSAQTEVPMTTRLFRY 176
G W RM A ER +++ + ADL+ER +A +E+ + GKPF Q+ ++ + RY
Sbjct: 71 LGSVWRRMDASERGRLLDKLADLVERDRATLATMESLNGGKPFLQAFYIDLQGVIKTLRY 130
Query: 177 YAGWADKIQGLTAPADGPYHVQTLHEPIGVAG---------------------------- 208
YAGWADKI G+T P DG Y T HEPIGV G
Sbjct: 131 YAGWADKIHGMTIPVDGDYFTFTRHEPIGVCGQIIPWNFPLLMFTWKIAPALCCGNTVVI 190
Query: 209 -------------------------VLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGK 243
V+NI+ GYGPTAGAA+ASH+ +DK+AFTGST GK
Sbjct: 191 KPAEQTPLSALYMGALIKEAGFPPGVVNILPGYGPTAGAAIASHIGIDKIAFTGSTEVGK 250
Query: 244 IVLQLAAKSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVH 303
++ + A +SNLK VTLELGGKSP I+ DAD+D A E AH +FFNQGQCC AGSR FV
Sbjct: 251 LIQEAAGRSNLKRVTLELGGKSPNIIFADADLDYAVEQAHQGVFFNQGQCCTAGSRIFVE 310
Query: 304 ESVYDQFVEKANALAMKRVVGDPFKGGIQQGPQIDSEQFEKILKYIRSGVDGGAKLETGG 363
ES+Y++FV+++ A +R+VG PF +QGPQID +Q+ KIL+ I+SGV GAKLE GG
Sbjct: 311 ESIYEEFVKRSVERAKRRIVGSPFDPTTEQGPQIDKKQYNKILELIQSGVAEGAKLECGG 370
Query: 364 ERLGAKGYYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYKDLDEVIQRSNASQYGLAAGV 423
+ LG KG++I+PTVF+ V DDM IAK+EIFGPVQ IL++K +DEVI+R+N S +GL A V
Sbjct: 371 KGLGRKGFFIEPTVFSNVTDDMRIAKEEIFGPVQEILRFKTMDEVIERANNSDFGLVAAV 430
Query: 424 FTHNLDTANTLMRALRVGSVWINCFDVFDAAIPFGGYKQSGQGREKGSYSLSNYLQVKAV 483
FT++++ A + A++ G+VWINC++ +A PFGG+K SG GRE G + L Y +VK V
Sbjct: 431 FTNDINKALMVSSAMQAGTVWINCYNALNAQSPFGGFKMSGNGREMGEFGLREYSEVKTV 490
Query: 484 VTAL 487
+
Sbjct: 491 TVKI 494
>pdb|1BXS|A Chain A, Sheep Liver Class 1 Aldehyde Dehydrogenase With Nad Bound
pdb|1BXS|B Chain B, Sheep Liver Class 1 Aldehyde Dehydrogenase With Nad Bound
pdb|1BXS|C Chain C, Sheep Liver Class 1 Aldehyde Dehydrogenase With Nad Bound
pdb|1BXS|D Chain D, Sheep Liver Class 1 Aldehyde Dehydrogenase With Nad Bound
Length = 501
Score = 444 bits (1142), Expect = e-125, Method: Compositional matrix adjust.
Identities = 227/481 (47%), Positives = 298/481 (61%), Gaps = 54/481 (11%)
Query: 61 VKVDYTQLLINGQFVDSASGKTFPTLDPRTGDVITHVAEGEAEDVNRAVSAARKAFDEG- 119
++ YT++ IN ++ S SGK FP +P T + + V EG+ EDV++AV AAR+AF G
Sbjct: 16 LQFKYTKIFINNEWHSSVSGKKFPVFNPATEEKLCEVEEGDKEDVDKAVKAARQAFQIGS 75
Query: 120 PWPRMTAYERSKIILRFADLLERHNDEIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAG 179
PW M A ER +++ + ADL+ER +A +E + GK F + ++ + RY AG
Sbjct: 76 PWRTMDASERGRLLNKLADLIERDRLLLATMEAMNGGKLFSNAYLMDLGGCIKTLRYCAG 135
Query: 180 WADKIQGLTAPADGPYHVQTLHEPIGVAG------------------------------- 208
WADKIQG T P DG + T EP+GV G
Sbjct: 136 WADKIQGRTIPMDGNFFTYTRSEPVGVCGQIIPWNFPLLMFLWKIGPALSCGNTVVVKPA 195
Query: 209 ----------------------VLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVL 246
V+NIV GYGPTAGAA++SHM+VDK+AFTGST GK++
Sbjct: 196 EQTPLTALHMGSLIKEAGFPPGVVNIVPGYGPTAGAAISSHMDVDKVAFTGSTEVGKLIK 255
Query: 247 QLAAKSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESV 306
+ A KSNLK V+LELGGKSP IV DAD+D A E AH +F++QGQCC A SR FV ES+
Sbjct: 256 EAAGKSNLKRVSLELGGKSPCIVFADADLDNAVEFAHQGVFYHQGQCCIAASRLFVEESI 315
Query: 307 YDQFVEKANALAMKRVVGDPFKGGIQQGPQIDSEQFEKILKYIRSGVDGGAKLETGGERL 366
YD+FV ++ A K V+G+P G+ QGPQID EQ+EKIL I SG GAKLE GG
Sbjct: 316 YDEFVRRSVERAKKYVLGNPLTPGVSQGPQIDKEQYEKILDLIESGKKEGAKLECGGGPW 375
Query: 367 GAKGYYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYKDLDEVIQRSNASQYGLAAGVFTH 426
G KGY+I+PTVF+ V DDM IAK+EIFGPVQ I+K+K LD+VI+R+N + YGL+AG+FT+
Sbjct: 376 GNKGYFIQPTVFSDVTDDMRIAKEEIFGPVQQIMKFKSLDDVIKRANNTFYGLSAGIFTN 435
Query: 427 NLDTANTLMRALRVGSVWINCFDVFDAAIPFGGYKQSGQGREKGSYSLSNYLQVKAVVTA 486
++D A T+ AL+ G+VW+NC+ V A PFGG+K SG GRE G Y Y +VK V
Sbjct: 436 DIDKAITVSSALQSGTVWVNCYSVVSAQCPFGGFKMSGNGRELGEYGFHEYTEVKTVTIK 495
Query: 487 L 487
+
Sbjct: 496 I 496
>pdb|1O9J|A Chain A, The X-Ray Crystal Structure Of Eta-Crystallin
pdb|1O9J|B Chain B, The X-Ray Crystal Structure Of Eta-Crystallin
pdb|1O9J|C Chain C, The X-Ray Crystal Structure Of Eta-Crystallin
pdb|1O9J|D Chain D, The X-Ray Crystal Structure Of Eta-Crystallin
Length = 501
Score = 436 bits (1121), Expect = e-122, Method: Compositional matrix adjust.
Identities = 227/481 (47%), Positives = 294/481 (61%), Gaps = 54/481 (11%)
Query: 61 VKVDYTQLLINGQFVDSASGKTFPTLDPRTGDVITHVAEGEAEDVNRAVSAARKAFDEG- 119
+K+ +T+L IN ++ +S SGKTFP +P T + I V E + EDV++AV AAR+AF G
Sbjct: 16 IKIQHTKLFINNEWHESVSGKTFPVFNPATEEKICEVEEADKEDVDKAVKAAREAFQMGS 75
Query: 120 PWPRMTAYERSKIILRFADLLERHNDEIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAG 179
PW M A ER ++I + ADL+ER +A LE+ + GK F + ++ + RY AG
Sbjct: 76 PWRTMDASERGQLIYKLADLIERDRLLLATLESINAGKVFASAYLMDLDYCIKALRYCAG 135
Query: 180 WADKIQGLTAPADGPYHVQTLHEPIGVAG------------------------------- 208
WADKIQG T P DG + T HEPIGV G
Sbjct: 136 WADKIQGRTIPVDGEFFSYTRHEPIGVCGLIFPWNAPMILLACKIGPALCCGNTVIVKPA 195
Query: 209 ----------------------VLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVL 246
V+NIV GYGPTAGAA++SHM+VDK+AFTGST GK++
Sbjct: 196 EQTPLTALHVASLIKEAGFPPGVVNIVPGYGPTAGAAISSHMDVDKVAFTGSTEVGKMIQ 255
Query: 247 QLAAKSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESV 306
+ AAKSNLK VTLELG K+P IV DAD+D A E AH +F NQGQ C A S+ FV E++
Sbjct: 256 EAAAKSNLKRVTLELGAKNPCIVFADADLDSAVEFAHQGVFTNQGQSCIAASKLFVEEAI 315
Query: 307 YDQFVEKANALAMKRVVGDPFKGGIQQGPQIDSEQFEKILKYIRSGVDGGAKLETGGERL 366
YD+FV+++ A K V G+P G+ GPQI+ Q KI++ I SG GAKLE GG
Sbjct: 316 YDEFVQRSVERAKKYVFGNPLTPGVNHGPQINKAQHNKIMELIESGKKEGAKLECGGGPW 375
Query: 367 GAKGYYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYKDLDEVIQRSNASQYGLAAGVFTH 426
G KGY+I+PTVF+ V DDM IAK+EIFGPVQ I+K+K LDEVI+R+N + YGL AGVFT
Sbjct: 376 GNKGYFIQPTVFSNVTDDMRIAKEEIFGPVQQIMKFKSLDEVIKRANNTYYGLVAGVFTK 435
Query: 427 NLDTANTLMRALRVGSVWINCFDVFDAAIPFGGYKQSGQGREKGSYSLSNYLQVKAVVTA 486
+LD A T+ AL+ G+VW+NC+ A P GG+K SG GRE G Y + Y +VK V
Sbjct: 436 DLDKAVTVSSALQAGTVWVNCYLAASAQSPAGGFKMSGHGREMGEYGIHEYTEVKTVTMK 495
Query: 487 L 487
+
Sbjct: 496 I 496
>pdb|2O2P|A Chain A, Crystal Structure Of The C-Terminal Domain Of Rat
10'formyltetrahydrofolate Dehydrogenase
pdb|2O2P|B Chain B, Crystal Structure Of The C-Terminal Domain Of Rat
10'formyltetrahydrofolate Dehydrogenase
pdb|2O2P|C Chain C, Crystal Structure Of The C-Terminal Domain Of Rat
10'formyltetrahydrofolate Dehydrogenase
pdb|2O2P|D Chain D, Crystal Structure Of The C-Terminal Domain Of Rat
10'formyltetrahydrofolate Dehydrogenase
pdb|2O2Q|A Chain A, Crystal Structure Of The C-Terminal Domain Of Rat
10'formyltetrahydrofolate Dehydrogenase In Complex With
Nadp
pdb|2O2Q|B Chain B, Crystal Structure Of The C-Terminal Domain Of Rat
10'formyltetrahydrofolate Dehydrogenase In Complex With
Nadp
pdb|2O2Q|C Chain C, Crystal Structure Of The C-Terminal Domain Of Rat
10'formyltetrahydrofolate Dehydrogenase In Complex With
Nadp
pdb|2O2Q|D Chain D, Crystal Structure Of The C-Terminal Domain Of Rat
10'formyltetrahydrofolate Dehydrogenase In Complex With
Nadp
pdb|2O2R|A Chain A, Crystal Structure Of The C-terminal Domain Of Rat
10'formyltetrahydrofolate Dehydrogenase In Complex With
Nadph
pdb|2O2R|B Chain B, Crystal Structure Of The C-terminal Domain Of Rat
10'formyltetrahydrofolate Dehydrogenase In Complex With
Nadph
pdb|2O2R|C Chain C, Crystal Structure Of The C-terminal Domain Of Rat
10'formyltetrahydrofolate Dehydrogenase In Complex With
Nadph
pdb|2O2R|D Chain D, Crystal Structure Of The C-terminal Domain Of Rat
10'formyltetrahydrofolate Dehydrogenase In Complex With
Nadph
pdb|4GO2|A Chain A, Crystal Structure Of The C-terminal Domain Of
10'formyltetrahydrofolate Dehydrogenase In Complex With
Thio-nadp
pdb|4GO2|B Chain B, Crystal Structure Of The C-terminal Domain Of
10'formyltetrahydrofolate Dehydrogenase In Complex With
Thio-nadp
pdb|4GO2|C Chain C, Crystal Structure Of The C-terminal Domain Of
10'formyltetrahydrofolate Dehydrogenase In Complex With
Thio-nadp
pdb|4GO2|D Chain D, Crystal Structure Of The C-terminal Domain Of
10'formyltetrahydrofolate Dehydrogenase In Complex With
Thio-nadp
Length = 517
Score = 341 bits (875), Expect = 4e-94, Method: Compositional matrix adjust.
Identities = 179/476 (37%), Positives = 275/476 (57%), Gaps = 59/476 (12%)
Query: 67 QLLINGQFVDSASGKTFPTLDPRTGDVITHVAEGEAEDVNRAVSAARKAFDEGPWPRMTA 126
QL I G+FVD+ KT+ T++P G VI V+ + DV++AV+AA++AF+ G W ++ A
Sbjct: 38 QLFIGGEFVDAEGSKTYNTINPTDGSVICQVSLAQVSDVDKAVAAAKEAFENGLWGKINA 97
Query: 127 YERSKIILRFADLLERHNDEIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADKIQG 186
+R +++ R AD++E+H +E+A +E D G + + +T V M+ + FRY+AGW DKIQG
Sbjct: 98 RDRGRLLYRLADVMEQHQEELATIEALDAGAVYTLALKTHVGMSIQTFRYFAGWCDKIQG 157
Query: 187 LTAPADG--PYHVQTL--HEPIGVAG---------------------------------- 208
T P + P TL EP+GV G
Sbjct: 158 ATIPINQARPNRNLTLTKKEPVGVCGIVIPWNYPLMMLSWKTAACLAAGNTVVIKPAQVT 217
Query: 209 -------------------VLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLA 249
V+NI+ G G G L+ H +V K+ FTGST GK +++
Sbjct: 218 PLTALKFAELTLKAGIPKGVVNILPGSGSLVGQRLSDHPDVRKIGFTGSTEVGKHIMKSC 277
Query: 250 AKSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQ 309
A SN+K V+LELGGKSP I+ D D++KA ++ ++FFN+G+ C A R FV ES+++Q
Sbjct: 278 ALSNVKKVSLELGGKSPLIIFADCDLNKAVQMGMSSVFFNKGENCIAAGRLFVEESIHNQ 337
Query: 310 FVEKANALAMKRVVGDPFKGGIQQGPQIDSEQFEKILKYIRSGVDGGAKLETGGERLGAK 369
FV+K K +G+P + GPQ K+++Y + GV GA L GG ++
Sbjct: 338 FVQKVVEEVEKMKIGNPLERDTNHGPQNHEAHLRKLVEYCQRGVKEGATLVCGGNQVPRP 397
Query: 370 GYYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYK--DLDEVIQRSNASQYGLAAGVFTHN 427
G++ +PTVFT V+D M IAK+E FGP+ I ++ D+D V+ R+NA+++GLA+GVFT +
Sbjct: 398 GFFFQPTVFTDVEDHMYIAKEESFGPIMIISRFADGDVDAVLSRANATEFGLASGVFTRD 457
Query: 428 LDTANTLMRALRVGSVWINCFDVFDAAIPFGGYKQSGQGREKGSYSLSNYLQVKAV 483
++ A + L+ G+V+IN ++ D A PFGG+KQSG G++ G +L+ YL++K V
Sbjct: 458 INKALYVSDKLQAGTVFINTYNKTDVAAPFGGFKQSGFGKDLGEAALNEYLRIKTV 513
>pdb|3RHM|A Chain A, Crystal Structure Of The E673q Mutant Of C-Terminal Domain
Of 10'formyltetrahydrofolate Dehydrogenase
pdb|3RHM|B Chain B, Crystal Structure Of The E673q Mutant Of C-Terminal Domain
Of 10'formyltetrahydrofolate Dehydrogenase
pdb|3RHM|C Chain C, Crystal Structure Of The E673q Mutant Of C-Terminal Domain
Of 10'formyltetrahydrofolate Dehydrogenase
pdb|3RHM|D Chain D, Crystal Structure Of The E673q Mutant Of C-Terminal Domain
Of 10'formyltetrahydrofolate Dehydrogenase
pdb|3RHO|A Chain A, Crystal Structure Of The E673q Mutant Of C-Terminal Domain
Of 10'formyltetrahydrofolate Dehydrogenase In Complex
With Nadp
pdb|3RHO|B Chain B, Crystal Structure Of The E673q Mutant Of C-Terminal Domain
Of 10'formyltetrahydrofolate Dehydrogenase In Complex
With Nadp
pdb|3RHO|C Chain C, Crystal Structure Of The E673q Mutant Of C-Terminal Domain
Of 10'formyltetrahydrofolate Dehydrogenase In Complex
With Nadp
pdb|3RHO|D Chain D, Crystal Structure Of The E673q Mutant Of C-Terminal Domain
Of 10'formyltetrahydrofolate Dehydrogenase In Complex
With Nadp
Length = 517
Score = 340 bits (873), Expect = 9e-94, Method: Compositional matrix adjust.
Identities = 178/476 (37%), Positives = 275/476 (57%), Gaps = 59/476 (12%)
Query: 67 QLLINGQFVDSASGKTFPTLDPRTGDVITHVAEGEAEDVNRAVSAARKAFDEGPWPRMTA 126
QL I G+FVD+ KT+ T++P G VI V+ + DV++AV+AA++AF+ G W ++ A
Sbjct: 38 QLFIGGEFVDAEGSKTYNTINPTDGSVICQVSLAQVSDVDKAVAAAKEAFENGLWGKINA 97
Query: 127 YERSKIILRFADLLERHNDEIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADKIQG 186
+R +++ R AD++E+H +E+A +E D G + + +T V M+ + FRY+AGW DKIQG
Sbjct: 98 RDRGRLLYRLADVMEQHQEELATIEALDAGAVYTLALKTHVGMSIQTFRYFAGWCDKIQG 157
Query: 187 LTAPADG--PYHVQTL--HEPIGVAG---------------------------------- 208
T P + P TL EP+GV G
Sbjct: 158 ATIPINQARPNRNLTLTKKEPVGVCGIVIPWNYPLMMLSWKTAACLAAGNTVVIKPAQVT 217
Query: 209 -------------------VLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLA 249
V+NI+ G G G L+ H +V K+ FTGST GK +++
Sbjct: 218 PLTALKFAELTLKAGIPKGVVNILPGSGSLVGQRLSDHPDVRKIGFTGSTEVGKHIMKSC 277
Query: 250 AKSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQ 309
A SN+K V+L+LGGKSP I+ D D++KA ++ ++FFN+G+ C A R FV ES+++Q
Sbjct: 278 ALSNVKKVSLQLGGKSPLIIFADCDLNKAVQMGMSSVFFNKGENCIAAGRLFVEESIHNQ 337
Query: 310 FVEKANALAMKRVVGDPFKGGIQQGPQIDSEQFEKILKYIRSGVDGGAKLETGGERLGAK 369
FV+K K +G+P + GPQ K+++Y + GV GA L GG ++
Sbjct: 338 FVQKVVEEVEKMKIGNPLERDTNHGPQNHEAHLRKLVEYCQRGVKEGATLVCGGNQVPRP 397
Query: 370 GYYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYK--DLDEVIQRSNASQYGLAAGVFTHN 427
G++ +PTVFT V+D M IAK+E FGP+ I ++ D+D V+ R+NA+++GLA+GVFT +
Sbjct: 398 GFFFQPTVFTDVEDHMYIAKEESFGPIMIISRFADGDVDAVLSRANATEFGLASGVFTRD 457
Query: 428 LDTANTLMRALRVGSVWINCFDVFDAAIPFGGYKQSGQGREKGSYSLSNYLQVKAV 483
++ A + L+ G+V+IN ++ D A PFGG+KQSG G++ G +L+ YL++K V
Sbjct: 458 INKALYVSDKLQAGTVFINTYNKTDVAAPFGGFKQSGFGKDLGEAALNEYLRIKTV 513
>pdb|3RHJ|A Chain A, Crystal Structure Of The E673a Mutant Of The C-Terminal
Domain Of Rat 10'formyltetrahydrofolate Dehydrogenase In
Complex With Co-Purified Nadp
pdb|3RHJ|B Chain B, Crystal Structure Of The E673a Mutant Of The C-Terminal
Domain Of Rat 10'formyltetrahydrofolate Dehydrogenase In
Complex With Co-Purified Nadp
pdb|3RHJ|C Chain C, Crystal Structure Of The E673a Mutant Of The C-Terminal
Domain Of Rat 10'formyltetrahydrofolate Dehydrogenase In
Complex With Co-Purified Nadp
pdb|3RHJ|D Chain D, Crystal Structure Of The E673a Mutant Of The C-Terminal
Domain Of Rat 10'formyltetrahydrofolate Dehydrogenase In
Complex With Co-Purified Nadp
Length = 517
Score = 339 bits (869), Expect = 2e-93, Method: Compositional matrix adjust.
Identities = 178/476 (37%), Positives = 274/476 (57%), Gaps = 59/476 (12%)
Query: 67 QLLINGQFVDSASGKTFPTLDPRTGDVITHVAEGEAEDVNRAVSAARKAFDEGPWPRMTA 126
QL I G+FVD+ KT+ T++P G VI V+ + DV++AV+AA++AF+ G W ++ A
Sbjct: 38 QLFIGGEFVDAEGSKTYNTINPTDGSVICQVSLAQVSDVDKAVAAAKEAFENGLWGKINA 97
Query: 127 YERSKIILRFADLLERHNDEIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADKIQG 186
+R +++ R AD++E+H +E+A +E D G + + +T V M+ + FRY+AGW DKIQG
Sbjct: 98 RDRGRLLYRLADVMEQHQEELATIEALDAGAVYTLALKTHVGMSIQTFRYFAGWCDKIQG 157
Query: 187 LTAPADG--PYHVQTL--HEPIGVAG---------------------------------- 208
T P + P TL EP+GV G
Sbjct: 158 ATIPINQARPNRNLTLTKKEPVGVCGIVIPWNYPLMMLSWKTAACLAAGNTVVIKPAQVT 217
Query: 209 -------------------VLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLA 249
V+NI+ G G G L+ H +V K+ FTGST GK +++
Sbjct: 218 PLTALKFAELTLKAGIPKGVVNILPGSGSLVGQRLSDHPDVRKIGFTGSTEVGKHIMKSC 277
Query: 250 AKSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQ 309
A SN+K V+L LGGKSP I+ D D++KA ++ ++FFN+G+ C A R FV ES+++Q
Sbjct: 278 ALSNVKKVSLALGGKSPLIIFADCDLNKAVQMGMSSVFFNKGENCIAAGRLFVEESIHNQ 337
Query: 310 FVEKANALAMKRVVGDPFKGGIQQGPQIDSEQFEKILKYIRSGVDGGAKLETGGERLGAK 369
FV+K K +G+P + GPQ K+++Y + GV GA L GG ++
Sbjct: 338 FVQKVVEEVEKMKIGNPLERDTNHGPQNHEAHLRKLVEYCQRGVKEGATLVCGGNQVPRP 397
Query: 370 GYYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYK--DLDEVIQRSNASQYGLAAGVFTHN 427
G++ +PTVFT V+D M IAK+E FGP+ I ++ D+D V+ R+NA+++GLA+GVFT +
Sbjct: 398 GFFFQPTVFTDVEDHMYIAKEESFGPIMIISRFADGDVDAVLSRANATEFGLASGVFTRD 457
Query: 428 LDTANTLMRALRVGSVWINCFDVFDAAIPFGGYKQSGQGREKGSYSLSNYLQVKAV 483
++ A + L+ G+V+IN ++ D A PFGG+KQSG G++ G +L+ YL++K V
Sbjct: 458 INKALYVSDKLQAGTVFINTYNKTDVAAPFGGFKQSGFGKDLGEAALNEYLRIKTV 513
>pdb|4GNZ|A Chain A, Crystal Structure Of The C707s Mutant Of C-terminal Domain
Of 10'formyltetrahydrofolate Dehydrogenase In Complex
With Nadp
pdb|4GNZ|B Chain B, Crystal Structure Of The C707s Mutant Of C-terminal Domain
Of 10'formyltetrahydrofolate Dehydrogenase In Complex
With Nadp
pdb|4GNZ|C Chain C, Crystal Structure Of The C707s Mutant Of C-terminal Domain
Of 10'formyltetrahydrofolate Dehydrogenase In Complex
With Nadp
pdb|4GNZ|D Chain D, Crystal Structure Of The C707s Mutant Of C-terminal Domain
Of 10'formyltetrahydrofolate Dehydrogenase In Complex
With Nadp
pdb|4GO0|A Chain A, Crystal Structure Of The C707s Mutant Of C-terminal Domain
Of 10'formyltetrahydrofolate Dehydrogenase In Complex
With Nadph
pdb|4GO0|B Chain B, Crystal Structure Of The C707s Mutant Of C-terminal Domain
Of 10'formyltetrahydrofolate Dehydrogenase In Complex
With Nadph
pdb|4GO0|C Chain C, Crystal Structure Of The C707s Mutant Of C-terminal Domain
Of 10'formyltetrahydrofolate Dehydrogenase In Complex
With Nadph
pdb|4GO0|D Chain D, Crystal Structure Of The C707s Mutant Of C-terminal Domain
Of 10'formyltetrahydrofolate Dehydrogenase In Complex
With Nadph
Length = 517
Score = 338 bits (866), Expect = 6e-93, Method: Compositional matrix adjust.
Identities = 178/476 (37%), Positives = 274/476 (57%), Gaps = 59/476 (12%)
Query: 67 QLLINGQFVDSASGKTFPTLDPRTGDVITHVAEGEAEDVNRAVSAARKAFDEGPWPRMTA 126
QL I G+FVD+ KT+ T++P G VI V+ + DV++AV+AA++AF+ G W ++ A
Sbjct: 38 QLFIGGEFVDAEGSKTYNTINPTDGSVICQVSLAQVSDVDKAVAAAKEAFENGLWGKINA 97
Query: 127 YERSKIILRFADLLERHNDEIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADKIQG 186
+R +++ R AD++E+H +E+A +E D G + + +T V M+ + FRY+AGW DKIQG
Sbjct: 98 RDRGRLLYRLADVMEQHQEELATIEALDAGAVYTLALKTHVGMSIQTFRYFAGWCDKIQG 157
Query: 187 LTAPADG--PYHVQTL--HEPIGVAG---------------------------------- 208
T P + P TL EP+GV G
Sbjct: 158 ATIPINQARPNRNLTLTKKEPVGVCGIVIPWNYPLMMLSWKTAACLAAGNTVVIKPAQVT 217
Query: 209 -------------------VLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLA 249
V+NI+ G G G L+ H +V K+ FTGST GK +++
Sbjct: 218 PLTALKFAELTLKAGIPKGVVNILPGSGSLVGQRLSDHPDVRKIGFTGSTEVGKHIMKSC 277
Query: 250 AKSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQ 309
A SN+K V+LELGGKSP I+ D D++KA ++ ++FFN+G+ A R FV ES+++Q
Sbjct: 278 ALSNVKKVSLELGGKSPLIIFADCDLNKAVQMGMSSVFFNKGENSIAAGRLFVEESIHNQ 337
Query: 310 FVEKANALAMKRVVGDPFKGGIQQGPQIDSEQFEKILKYIRSGVDGGAKLETGGERLGAK 369
FV+K K +G+P + GPQ K+++Y + GV GA L GG ++
Sbjct: 338 FVQKVVEEVEKMKIGNPLERDTNHGPQNHEAHLRKLVEYCQRGVKEGATLVCGGNQVPRP 397
Query: 370 GYYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYK--DLDEVIQRSNASQYGLAAGVFTHN 427
G++ +PTVFT V+D M IAK+E FGP+ I ++ D+D V+ R+NA+++GLA+GVFT +
Sbjct: 398 GFFFQPTVFTDVEDHMYIAKEESFGPIMIISRFADGDVDAVLSRANATEFGLASGVFTRD 457
Query: 428 LDTANTLMRALRVGSVWINCFDVFDAAIPFGGYKQSGQGREKGSYSLSNYLQVKAV 483
++ A + L+ G+V+IN ++ D A PFGG+KQSG G++ G +L+ YL++K V
Sbjct: 458 INKALYVSDKLQAGTVFINTYNKTDVAAPFGGFKQSGFGKDLGEAALNEYLRIKTV 513
>pdb|3RHR|A Chain A, Crystal Structure Of The C707a Mutant Of The C-Terminal
Domain Of 10'formyltetrahydrofolate Dehydrogenase In
Complex With Nadph
pdb|3RHR|B Chain B, Crystal Structure Of The C707a Mutant Of The C-Terminal
Domain Of 10'formyltetrahydrofolate Dehydrogenase In
Complex With Nadph
pdb|3RHR|C Chain C, Crystal Structure Of The C707a Mutant Of The C-Terminal
Domain Of 10'formyltetrahydrofolate Dehydrogenase In
Complex With Nadph
pdb|3RHR|D Chain D, Crystal Structure Of The C707a Mutant Of The C-Terminal
Domain Of 10'formyltetrahydrofolate Dehydrogenase In
Complex With Nadph
pdb|3RHP|A Chain A, Crystal Structure Of The C707a Mutant Of The C-Terminal
Domain Of 10'formyltetrahydrofolate Dehydrogenase
pdb|3RHP|B Chain B, Crystal Structure Of The C707a Mutant Of The C-Terminal
Domain Of 10'formyltetrahydrofolate Dehydrogenase
pdb|3RHP|C Chain C, Crystal Structure Of The C707a Mutant Of The C-Terminal
Domain Of 10'formyltetrahydrofolate Dehydrogenase
pdb|3RHP|D Chain D, Crystal Structure Of The C707a Mutant Of The C-Terminal
Domain Of 10'formyltetrahydrofolate Dehydrogenase
pdb|3RHQ|A Chain A, Crystal Structure Of The C707a Mutant Of C-Terminal Domain
Of 10'formyltetrahydrofolate Dehydrogenase In Complex
With Nadp
pdb|3RHQ|B Chain B, Crystal Structure Of The C707a Mutant Of C-Terminal Domain
Of 10'formyltetrahydrofolate Dehydrogenase In Complex
With Nadp
pdb|3RHQ|C Chain C, Crystal Structure Of The C707a Mutant Of C-Terminal Domain
Of 10'formyltetrahydrofolate Dehydrogenase In Complex
With Nadp
pdb|3RHQ|D Chain D, Crystal Structure Of The C707a Mutant Of C-Terminal Domain
Of 10'formyltetrahydrofolate Dehydrogenase In Complex
With Nadp
Length = 517
Score = 337 bits (865), Expect = 7e-93, Method: Compositional matrix adjust.
Identities = 178/476 (37%), Positives = 274/476 (57%), Gaps = 59/476 (12%)
Query: 67 QLLINGQFVDSASGKTFPTLDPRTGDVITHVAEGEAEDVNRAVSAARKAFDEGPWPRMTA 126
QL I G+FVD+ KT+ T++P G VI V+ + DV++AV+AA++AF+ G W ++ A
Sbjct: 38 QLFIGGEFVDAEGSKTYNTINPTDGSVICQVSLAQVSDVDKAVAAAKEAFENGLWGKINA 97
Query: 127 YERSKIILRFADLLERHNDEIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADKIQG 186
+R +++ R AD++E+H +E+A +E D G + + +T V M+ + FRY+AGW DKIQG
Sbjct: 98 RDRGRLLYRLADVMEQHQEELATIEALDAGAVYTLALKTHVGMSIQTFRYFAGWCDKIQG 157
Query: 187 LTAPADG--PYHVQTL--HEPIGVAG---------------------------------- 208
T P + P TL EP+GV G
Sbjct: 158 ATIPINQARPNRNLTLTKKEPVGVCGIVIPWNYPLMMLSWKTAACLAAGNTVVIKPAQVT 217
Query: 209 -------------------VLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLA 249
V+NI+ G G G L+ H +V K+ FTGST GK +++
Sbjct: 218 PLTALKFAELTLKAGIPKGVVNILPGSGSLVGQRLSDHPDVRKIGFTGSTEVGKHIMKSC 277
Query: 250 AKSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQ 309
A SN+K V+LELGGKSP I+ D D++KA ++ ++FFN+G+ A R FV ES+++Q
Sbjct: 278 ALSNVKKVSLELGGKSPLIIFADCDLNKAVQMGMSSVFFNKGENAIAAGRLFVEESIHNQ 337
Query: 310 FVEKANALAMKRVVGDPFKGGIQQGPQIDSEQFEKILKYIRSGVDGGAKLETGGERLGAK 369
FV+K K +G+P + GPQ K+++Y + GV GA L GG ++
Sbjct: 338 FVQKVVEEVEKMKIGNPLERDTNHGPQNHEAHLRKLVEYCQRGVKEGATLVCGGNQVPRP 397
Query: 370 GYYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYK--DLDEVIQRSNASQYGLAAGVFTHN 427
G++ +PTVFT V+D M IAK+E FGP+ I ++ D+D V+ R+NA+++GLA+GVFT +
Sbjct: 398 GFFFQPTVFTDVEDHMYIAKEESFGPIMIISRFADGDVDAVLSRANATEFGLASGVFTRD 457
Query: 428 LDTANTLMRALRVGSVWINCFDVFDAAIPFGGYKQSGQGREKGSYSLSNYLQVKAV 483
++ A + L+ G+V+IN ++ D A PFGG+KQSG G++ G +L+ YL++K V
Sbjct: 458 INKALYVSDKLQAGTVFINTYNKTDVAAPFGGFKQSGFGKDLGEAALNEYLRIKTV 513
>pdb|3RHL|A Chain A, Crystal Structure Of The E673aC707A DOUBLE MUTANT OF THE
C-Terminal Domain Of Rat 10'formyltetrahydrofolate
Dehydrogenase In Complex With Co-Purified Nadp
pdb|3RHL|B Chain B, Crystal Structure Of The E673aC707A DOUBLE MUTANT OF THE
C-Terminal Domain Of Rat 10'formyltetrahydrofolate
Dehydrogenase In Complex With Co-Purified Nadp
pdb|3RHL|C Chain C, Crystal Structure Of The E673aC707A DOUBLE MUTANT OF THE
C-Terminal Domain Of Rat 10'formyltetrahydrofolate
Dehydrogenase In Complex With Co-Purified Nadp
pdb|3RHL|D Chain D, Crystal Structure Of The E673aC707A DOUBLE MUTANT OF THE
C-Terminal Domain Of Rat 10'formyltetrahydrofolate
Dehydrogenase In Complex With Co-Purified Nadp
Length = 517
Score = 335 bits (859), Expect = 3e-92, Method: Compositional matrix adjust.
Identities = 177/476 (37%), Positives = 273/476 (57%), Gaps = 59/476 (12%)
Query: 67 QLLINGQFVDSASGKTFPTLDPRTGDVITHVAEGEAEDVNRAVSAARKAFDEGPWPRMTA 126
QL I G+FVD+ KT+ T++P G VI V+ + DV++AV+AA++AF+ G W ++ A
Sbjct: 38 QLFIGGEFVDAEGSKTYNTINPTDGSVICQVSLAQVSDVDKAVAAAKEAFENGLWGKINA 97
Query: 127 YERSKIILRFADLLERHNDEIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADKIQG 186
+R +++ R AD++E+H +E+A +E D G + + +T V M+ + FRY+AGW DKIQG
Sbjct: 98 RDRGRLLYRLADVMEQHQEELATIEALDAGAVYTLALKTHVGMSIQTFRYFAGWCDKIQG 157
Query: 187 LTAPADG--PYHVQTL--HEPIGVAG---------------------------------- 208
T P + P TL EP+GV G
Sbjct: 158 ATIPINQARPNRNLTLTKKEPVGVCGIVIPWNYPLMMLSWKTAACLAAGNTVVIKPAQVT 217
Query: 209 -------------------VLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLA 249
V+NI+ G G G L+ H +V K+ FTGST GK +++
Sbjct: 218 PLTALKFAELTLKAGIPKGVVNILPGSGSLVGQRLSDHPDVRKIGFTGSTEVGKHIMKSC 277
Query: 250 AKSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQ 309
A SN+K V+L LGGKSP I+ D D++KA ++ ++FFN+G+ A R FV ES+++Q
Sbjct: 278 ALSNVKKVSLALGGKSPLIIFADCDLNKAVQMGMSSVFFNKGENAIAAGRLFVEESIHNQ 337
Query: 310 FVEKANALAMKRVVGDPFKGGIQQGPQIDSEQFEKILKYIRSGVDGGAKLETGGERLGAK 369
FV+K K +G+P + GPQ K+++Y + GV GA L GG ++
Sbjct: 338 FVQKVVEEVEKMKIGNPLERDTNHGPQNHEAHLRKLVEYCQRGVKEGATLVCGGNQVPRP 397
Query: 370 GYYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYK--DLDEVIQRSNASQYGLAAGVFTHN 427
G++ +PTVFT V+D M IAK+E FGP+ I ++ D+D V+ R+NA+++GLA+GVFT +
Sbjct: 398 GFFFQPTVFTDVEDHMYIAKEESFGPIMIISRFADGDVDAVLSRANATEFGLASGVFTRD 457
Query: 428 LDTANTLMRALRVGSVWINCFDVFDAAIPFGGYKQSGQGREKGSYSLSNYLQVKAV 483
++ A + L+ G+V+IN ++ D A PFGG+KQSG G++ G +L+ YL++K V
Sbjct: 458 INKALYVSDKLQAGTVFINTYNKTDVAAPFGGFKQSGFGKDLGEAALNEYLRIKTV 513
>pdb|2WME|A Chain A, Crystallographic Structure Of Betaine Aldehyde
Dehydrogenase From Pseudomonas Aeruginosa
pdb|2WME|B Chain B, Crystallographic Structure Of Betaine Aldehyde
Dehydrogenase From Pseudomonas Aeruginosa
pdb|2WME|D Chain D, Crystallographic Structure Of Betaine Aldehyde
Dehydrogenase From Pseudomonas Aeruginosa
pdb|2WME|F Chain F, Crystallographic Structure Of Betaine Aldehyde
Dehydrogenase From Pseudomonas Aeruginosa
pdb|2WME|G Chain G, Crystallographic Structure Of Betaine Aldehyde
Dehydrogenase From Pseudomonas Aeruginosa
pdb|2WME|H Chain H, Crystallographic Structure Of Betaine Aldehyde
Dehydrogenase From Pseudomonas Aeruginosa
Length = 490
Score = 324 bits (830), Expect = 9e-89, Method: Compositional matrix adjust.
Identities = 187/487 (38%), Positives = 261/487 (53%), Gaps = 59/487 (12%)
Query: 62 KVDYTQLLINGQFVDSASGKTFPTLDPRTGDVITHVAEGEAEDVNRAVSAARKAFDEGPW 121
+ + +L I G++V+++SG TF T++P G+V+ V EDV RAV +A + + W
Sbjct: 3 RFEEQKLYIGGRYVEASSGATFETINPANGEVLAKVQRASREDVERAVQSAVEG--QKVW 60
Query: 122 PRMTAYERSKIILRFADLLERHNDEIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWA 181
MTA +RS+I+ R D+L NDE+AALET D GKP ++ ++ + YYAG
Sbjct: 61 AAMTAMQRSRILRRAVDILRERNDELAALETLDTGKPLAETRSVDIVTGADVLEYYAGLV 120
Query: 182 DKIQGLTAPADGPYHVQTLHEPIGVA---------------------------------- 207
I+G P V T EP+GV
Sbjct: 121 PAIEGEQIPLRETSFVYTRREPLGVVAGIGAWNYPVQIALWKSAPALAAGNAMIFKPSEV 180
Query: 208 -------------------GVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQL 248
GV N+++G G G L H ++K++FTG T+TGK V+
Sbjct: 181 TPLTALKLAEIYTEAGVPDGVFNVLTGSGREVGQWLTEHPLIEKISFTGGTSTGKKVMAS 240
Query: 249 AAKSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYD 308
A+ S+LK VT+ELGGKSP I+ DAD+D+AA++A A FF+ GQ C G+R F+H S
Sbjct: 241 ASSSSLKEVTMELGGKSPLIIFPDADLDRAADIAVMANFFSSGQVCTNGTRVFIHRSQQA 300
Query: 309 QFVEKANALAMKRVVGDPFKGGIQQGPQIDSEQFEKILKYIRSGVDGGAKLETGGERL-- 366
+F K + +GDP GP + E +L YI SG A+L GGER+
Sbjct: 301 RFEAKVLERVQRIRLGDPQDENTNFGPLVSFPHMESVLGYIESGKAQKARLLCGGERVTD 360
Query: 367 GA--KGYYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYKDLDEVIQRSNASQYGLAAGVF 424
GA KG Y+ PTVFT +DDM I ++EIFGPV SIL Y D DE I+R+N ++YGLAAGV
Sbjct: 361 GAFGKGAYVAPTVFTDCRDDMTIVREEIFGPVMSILVYDDEDEAIRRANDTEYGLAAGVV 420
Query: 425 THNLDTANTLMRALRVGSVWINCFDVFDAAIPFGGYKQSGQGREKGSYSLSNYLQVKAVV 484
T +L A+ + L G WIN + A +P GGYKQSG GRE G +L++Y ++K+V
Sbjct: 421 TQDLARAHRAIHRLEAGICWINTWGESPAEMPVGGYKQSGVGRENGLTTLAHYTRIKSVQ 480
Query: 485 TALKNPA 491
L + A
Sbjct: 481 VELGDYA 487
>pdb|2WOX|A Chain A, Betaine Aldehyde Dehydrogenase From Pseudomonas Aeruginosa
With Nad(P)h-Catalytic Thiol Adduct.
pdb|2WOX|B Chain B, Betaine Aldehyde Dehydrogenase From Pseudomonas Aeruginosa
With Nad(P)h-Catalytic Thiol Adduct.
pdb|2WOX|C Chain C, Betaine Aldehyde Dehydrogenase From Pseudomonas Aeruginosa
With Nad(P)h-Catalytic Thiol Adduct.
pdb|2WOX|D Chain D, Betaine Aldehyde Dehydrogenase From Pseudomonas Aeruginosa
With Nad(P)h-Catalytic Thiol Adduct
Length = 489
Score = 323 bits (829), Expect = 1e-88, Method: Compositional matrix adjust.
Identities = 187/487 (38%), Positives = 261/487 (53%), Gaps = 59/487 (12%)
Query: 62 KVDYTQLLINGQFVDSASGKTFPTLDPRTGDVITHVAEGEAEDVNRAVSAARKAFDEGPW 121
+ + +L I G++V+++SG TF T++P G+V+ V EDV RAV +A + + W
Sbjct: 2 RFEEQKLYIGGRYVEASSGATFETINPANGEVLAKVQRASREDVERAVQSAVEG--QKVW 59
Query: 122 PRMTAYERSKIILRFADLLERHNDEIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWA 181
MTA +RS+I+ R D+L NDE+AALET D GKP ++ ++ + YYAG
Sbjct: 60 AAMTAMQRSRILRRAVDILRERNDELAALETLDTGKPLAETRSVDIVTGADVLEYYAGLV 119
Query: 182 DKIQGLTAPADGPYHVQTLHEPIGVA---------------------------------- 207
I+G P V T EP+GV
Sbjct: 120 PAIEGEQIPLRETSFVYTRREPLGVVAGIGAWNYPVQIALWKSAPALAAGNAMIFKPSEV 179
Query: 208 -------------------GVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQL 248
GV N+++G G G L H ++K++FTG T+TGK V+
Sbjct: 180 TPLTALKLAEIYTEAGVPDGVFNVLTGSGREVGQWLTEHPLIEKISFTGGTSTGKKVMAS 239
Query: 249 AAKSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYD 308
A+ S+LK VT+ELGGKSP I+ DAD+D+AA++A A FF+ GQ C G+R F+H S
Sbjct: 240 ASSSSLKEVTMELGGKSPLIIFPDADLDRAADIAVMANFFSSGQVCTNGTRVFIHRSQQA 299
Query: 309 QFVEKANALAMKRVVGDPFKGGIQQGPQIDSEQFEKILKYIRSGVDGGAKLETGGERL-- 366
+F K + +GDP GP + E +L YI SG A+L GGER+
Sbjct: 300 RFEAKVLERVQRIRLGDPQDENTNFGPLVSFPHMESVLGYIESGKAQKARLLCGGERVTD 359
Query: 367 GA--KGYYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYKDLDEVIQRSNASQYGLAAGVF 424
GA KG Y+ PTVFT +DDM I ++EIFGPV SIL Y D DE I+R+N ++YGLAAGV
Sbjct: 360 GAFGKGAYVAPTVFTDCRDDMTIVREEIFGPVMSILVYDDEDEAIRRANDTEYGLAAGVV 419
Query: 425 THNLDTANTLMRALRVGSVWINCFDVFDAAIPFGGYKQSGQGREKGSYSLSNYLQVKAVV 484
T +L A+ + L G WIN + A +P GGYKQSG GRE G +L++Y ++K+V
Sbjct: 420 TQDLARAHRAIHRLEAGICWINTWGESPAEMPVGGYKQSGVGRENGLTTLAHYTRIKSVQ 479
Query: 485 TALKNPA 491
L + A
Sbjct: 480 VELGDYA 486
>pdb|2XDR|A Chain A, Crystallographic Structure Of Betaine Aldehyde
Dehydrogenase Mutant E252a From Pseudomonas Aeruginosa
pdb|2XDR|B Chain B, Crystallographic Structure Of Betaine Aldehyde
Dehydrogenase Mutant E252a From Pseudomonas Aeruginosa
pdb|2XDR|C Chain C, Crystallographic Structure Of Betaine Aldehyde
Dehydrogenase Mutant E252a From Pseudomonas Aeruginosa
pdb|2XDR|D Chain D, Crystallographic Structure Of Betaine Aldehyde
Dehydrogenase Mutant E252a From Pseudomonas Aeruginosa
Length = 489
Score = 321 bits (823), Expect = 5e-88, Method: Compositional matrix adjust.
Identities = 186/487 (38%), Positives = 260/487 (53%), Gaps = 59/487 (12%)
Query: 62 KVDYTQLLINGQFVDSASGKTFPTLDPRTGDVITHVAEGEAEDVNRAVSAARKAFDEGPW 121
+ + +L I G++V+++SG TF T++P G+V+ V EDV RAV +A + + W
Sbjct: 2 RFEEQKLYIGGRYVEASSGATFETINPANGEVLAKVQRASREDVERAVQSAVEG--QKVW 59
Query: 122 PRMTAYERSKIILRFADLLERHNDEIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWA 181
MTA +RS+I+ R D+L NDE+AALET D GKP ++ ++ + YYAG
Sbjct: 60 AAMTAMQRSRILRRAVDILRERNDELAALETLDTGKPLAETRSVDIVTGADVLEYYAGLV 119
Query: 182 DKIQGLTAPADGPYHVQTLHEPIGVA---------------------------------- 207
I+G P V T EP+GV
Sbjct: 120 PAIEGEQIPLRETSFVYTRREPLGVVAGIGAWNYPVQIALWKSAPALAAGNAMIFKPSEV 179
Query: 208 -------------------GVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQL 248
GV N+++G G G L H ++K++FTG T+TGK V+
Sbjct: 180 TPLTALKLAEIYTEAGVPDGVFNVLTGSGREVGQWLTEHPLIEKISFTGGTSTGKKVMAS 239
Query: 249 AAKSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYD 308
A+ S+LK VT+ LGGKSP I+ DAD+D+AA++A A FF+ GQ C G+R F+H S
Sbjct: 240 ASSSSLKEVTMALGGKSPLIIFPDADLDRAADIAVMANFFSSGQVCTNGTRVFIHRSQQA 299
Query: 309 QFVEKANALAMKRVVGDPFKGGIQQGPQIDSEQFEKILKYIRSGVDGGAKLETGGERL-- 366
+F K + +GDP GP + E +L YI SG A+L GGER+
Sbjct: 300 RFEAKVLERVQRIRLGDPQDENTNFGPLVSFPHMESVLGYIESGKAQKARLLCGGERVTD 359
Query: 367 GA--KGYYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYKDLDEVIQRSNASQYGLAAGVF 424
GA KG Y+ PTVFT +DDM I ++EIFGPV SIL Y D DE I+R+N ++YGLAAGV
Sbjct: 360 GAFGKGAYVAPTVFTDCRDDMTIVREEIFGPVMSILVYDDEDEAIRRANDTEYGLAAGVV 419
Query: 425 THNLDTANTLMRALRVGSVWINCFDVFDAAIPFGGYKQSGQGREKGSYSLSNYLQVKAVV 484
T +L A+ + L G WIN + A +P GGYKQSG GRE G +L++Y ++K+V
Sbjct: 420 TQDLARAHRAIHRLEAGICWINTWGESPAEMPVGGYKQSGVGRENGLTTLAHYTRIKSVQ 479
Query: 485 TALKNPA 491
L + A
Sbjct: 480 VELGDYA 486
>pdb|3ZQA|A Chain A, Crystallographic Structure Of Betaine Aldehyde
Dehydrogenase Mutant C286a From Pseudomonas Aeruginosa
In Complex With Nadph
pdb|3ZQA|B Chain B, Crystallographic Structure Of Betaine Aldehyde
Dehydrogenase Mutant C286a From Pseudomonas Aeruginosa
In Complex With Nadph
pdb|3ZQA|C Chain C, Crystallographic Structure Of Betaine Aldehyde
Dehydrogenase Mutant C286a From Pseudomonas Aeruginosa
In Complex With Nadph
pdb|3ZQA|D Chain D, Crystallographic Structure Of Betaine Aldehyde
Dehydrogenase Mutant C286a From Pseudomonas Aeruginosa
In Complex With Nadph
Length = 490
Score = 320 bits (821), Expect = 1e-87, Method: Compositional matrix adjust.
Identities = 186/487 (38%), Positives = 260/487 (53%), Gaps = 59/487 (12%)
Query: 62 KVDYTQLLINGQFVDSASGKTFPTLDPRTGDVITHVAEGEAEDVNRAVSAARKAFDEGPW 121
+ + +L I G++V+++SG TF T++P G+V+ V EDV RAV +A + + W
Sbjct: 3 RFEEQKLYIGGRYVEASSGATFETINPANGEVLAKVQRASREDVERAVQSAVEG--QKVW 60
Query: 122 PRMTAYERSKIILRFADLLERHNDEIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWA 181
MTA +RS+I+ R D+L NDE+AALET D GKP ++ ++ + YYAG
Sbjct: 61 AAMTAMQRSRILRRAVDILRERNDELAALETLDTGKPLAETRSVDIVTGADVLEYYAGLV 120
Query: 182 DKIQGLTAPADGPYHVQTLHEPIGVA---------------------------------- 207
I+G P V T EP+GV
Sbjct: 121 PAIEGEQIPLRETSFVYTRREPLGVVAGIGAWNYPVQIALWKSAPALAAGNAMIFKPSEV 180
Query: 208 -------------------GVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQL 248
GV N+++G G G L H ++K++FTG T+TGK V+
Sbjct: 181 TPLTALKLAEIYTEAGVPDGVFNVLTGSGREVGQWLTEHPLIEKISFTGGTSTGKKVMAS 240
Query: 249 AAKSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYD 308
A+ S+LK VT+ELGGKSP I+ DAD+D+AA++A A FF+ GQ G+R F+H S
Sbjct: 241 ASSSSLKEVTMELGGKSPLIIFPDADLDRAADIAVMANFFSSGQVATNGTRVFIHRSQQA 300
Query: 309 QFVEKANALAMKRVVGDPFKGGIQQGPQIDSEQFEKILKYIRSGVDGGAKLETGGERL-- 366
+F K + +GDP GP + E +L YI SG A+L GGER+
Sbjct: 301 RFEAKVLERVQRIRLGDPQDENTNFGPLVSFPHMESVLGYIESGKAQKARLLCGGERVTD 360
Query: 367 GA--KGYYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYKDLDEVIQRSNASQYGLAAGVF 424
GA KG Y+ PTVFT +DDM I ++EIFGPV SIL Y D DE I+R+N ++YGLAAGV
Sbjct: 361 GAFGKGAYVAPTVFTDCRDDMTIVREEIFGPVMSILVYDDEDEAIRRANDTEYGLAAGVV 420
Query: 425 THNLDTANTLMRALRVGSVWINCFDVFDAAIPFGGYKQSGQGREKGSYSLSNYLQVKAVV 484
T +L A+ + L G WIN + A +P GGYKQSG GRE G +L++Y ++K+V
Sbjct: 421 TQDLARAHRAIHRLEAGICWINTWGESPAEMPVGGYKQSGVGRENGLTTLAHYTRIKSVQ 480
Query: 485 TALKNPA 491
L + A
Sbjct: 481 VELGDYA 487
>pdb|2WME|C Chain C, Crystallographic Structure Of Betaine Aldehyde
Dehydrogenase From Pseudomonas Aeruginosa
pdb|2WME|E Chain E, Crystallographic Structure Of Betaine Aldehyde
Dehydrogenase From Pseudomonas Aeruginosa
Length = 490
Score = 319 bits (818), Expect = 2e-87, Method: Compositional matrix adjust.
Identities = 186/487 (38%), Positives = 260/487 (53%), Gaps = 59/487 (12%)
Query: 62 KVDYTQLLINGQFVDSASGKTFPTLDPRTGDVITHVAEGEAEDVNRAVSAARKAFDEGPW 121
+ + +L I G++V+++SG TF T++P G+V+ V EDV RAV +A + + W
Sbjct: 3 RFEEQKLYIGGRYVEASSGATFETINPANGEVLAKVQRASREDVERAVQSAVEG--QKVW 60
Query: 122 PRMTAYERSKIILRFADLLERHNDEIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWA 181
MTA +RS+I+ R D+L NDE+AALET D GKP ++ ++ + YYAG
Sbjct: 61 AAMTAMQRSRILRRAVDILRERNDELAALETLDTGKPLAETRSVDIVTGADVLEYYAGLV 120
Query: 182 DKIQGLTAPADGPYHVQTLHEPIGVA---------------------------------- 207
I+G P V T EP+GV
Sbjct: 121 PAIEGEQIPLRETSFVYTRREPLGVVAGIGAWNYPVQIALWKSAPALAAGNAMIFKPSEV 180
Query: 208 -------------------GVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQL 248
GV N+++G G G L H ++K++FTG T+TGK V+
Sbjct: 181 TPLTALKLAEIYTEAGVPDGVFNVLTGSGREVGQWLTEHPLIEKISFTGGTSTGKKVMAS 240
Query: 249 AAKSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYD 308
A+ S+LK VT+ELGGKSP I+ DAD+D+AA++A A FF+ GQ G+R F+H S
Sbjct: 241 ASSSSLKEVTMELGGKSPLIIFPDADLDRAADIAVMANFFSSGQVXTNGTRVFIHRSQQA 300
Query: 309 QFVEKANALAMKRVVGDPFKGGIQQGPQIDSEQFEKILKYIRSGVDGGAKLETGGERL-- 366
+F K + +GDP GP + E +L YI SG A+L GGER+
Sbjct: 301 RFEAKVLERVQRIRLGDPQDENTNFGPLVSFPHMESVLGYIESGKAQKARLLCGGERVTD 360
Query: 367 GA--KGYYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYKDLDEVIQRSNASQYGLAAGVF 424
GA KG Y+ PTVFT +DDM I ++EIFGPV SIL Y D DE I+R+N ++YGLAAGV
Sbjct: 361 GAFGKGAYVAPTVFTDCRDDMTIVREEIFGPVMSILVYDDEDEAIRRANDTEYGLAAGVV 420
Query: 425 THNLDTANTLMRALRVGSVWINCFDVFDAAIPFGGYKQSGQGREKGSYSLSNYLQVKAVV 484
T +L A+ + L G WIN + A +P GGYKQSG GRE G +L++Y ++K+V
Sbjct: 421 TQDLARAHRAIHRLEAGICWINTWGESPAEMPVGGYKQSGVGRENGLTTLAHYTRIKSVQ 480
Query: 485 TALKNPA 491
L + A
Sbjct: 481 VELGDYA 487
>pdb|4A0M|A Chain A, Crystal Structure Of Betaine Aldehyde Dehydrogenase From
Spinach In Complex With Nad
pdb|4A0M|B Chain B, Crystal Structure Of Betaine Aldehyde Dehydrogenase From
Spinach In Complex With Nad
pdb|4A0M|C Chain C, Crystal Structure Of Betaine Aldehyde Dehydrogenase From
Spinach In Complex With Nad
pdb|4A0M|D Chain D, Crystal Structure Of Betaine Aldehyde Dehydrogenase From
Spinach In Complex With Nad
Length = 496
Score = 301 bits (770), Expect = 6e-82, Method: Compositional matrix adjust.
Identities = 174/485 (35%), Positives = 248/485 (51%), Gaps = 61/485 (12%)
Query: 67 QLLINGQFVDSASGKTFPTLDPRTGDVITHVAEGEAEDVNRAVSAARKAFDEGPWPRMTA 126
QL I+G++ + P ++P T ++I + AEDV AV AAR+AF W +
Sbjct: 9 QLFIDGEWREPIKKNRIPVINPSTEEIIGDIPAATAEDVEVAVVAARRAFRRNNWSATSG 68
Query: 127 YERSKIILRFADLLERHNDEIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADKIQG 186
R+ + A + D LET D+GKPF++ A ++ F Y+AG A+ + G
Sbjct: 69 AHRATYLRAIAAKITEKKDHFVKLETIDSGKPFDE-AVLDIDDVASCFEYFAGQAEALDG 127
Query: 187 -LTAPADGP---YHVQTLHEPIGVAG---------------------------------- 208
AP P + L +P+GV G
Sbjct: 128 KQKAPVTLPMERFKSHVLRQPLGVVGLISPWNYPLLMATWKIAPALAAGCTAVLKPSELA 187
Query: 209 -------------------VLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLA 249
VLNI++G GP AGA L SH +VDK+AFTGS+ TG V+ A
Sbjct: 188 SVTCLEFGEVCNEVGLPPGVLNILTGLGPDAGAPLVSHPDVDKIAFTGSSATGSKVMASA 247
Query: 250 AKSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQ 309
A+ +KPVTLELGGKSP +V ED D+DK E + F+ GQ C A SR VHES+ +
Sbjct: 248 AQL-VKPVTLELGGKSPIVVFEDVDIDKVVEWTIFGCFWTNGQICSATSRLLVHESIAAE 306
Query: 310 FVEKANALAMKRVVGDPFKGGIQQGPQIDSEQFEKILKYIRSGVDGGAKLETGGERLG-- 367
FV+K + DPF+ G + GP I Q++KI+K+I + GA + GG R
Sbjct: 307 FVDKLVKWTKNIKISDPFEEGCRLGPVISKGQYDKIMKFISTAKSEGATILYGGSRPEHL 366
Query: 368 AKGYYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYKDLDEVIQRSNASQYGLAAGVFTHN 427
KGYYI+PT+ T + M I K+E+FGPV + + DE I +N ++YGLAA VF+++
Sbjct: 367 KKGYYIEPTIVTDISTSMQIWKEEVFGPVLCVKTFSSEDEAIALANDTEYGLAAAVFSND 426
Query: 428 LDTANTLMRALRVGSVWINCFDVFDAAIPFGGYKQSGQGREKGSYSLSNYLQVKAVVTAL 487
L+ + +AL VG+VW+NC P+GG K+SG GRE G + + NYL +K V +
Sbjct: 427 LERCERITKALEVGAVWVNCSQPCFVQAPWGGIKRSGFGRELGEWGIQNYLNIKQVTQDI 486
Query: 488 KNPAW 492
+ W
Sbjct: 487 SDEPW 491
>pdb|3IWK|A Chain A, Crystal Structure Of Aminoaldehyde Dehydrogenase 1 From
Pisum Sativum (Psamadh1)
pdb|3IWK|B Chain B, Crystal Structure Of Aminoaldehyde Dehydrogenase 1 From
Pisum Sativum (Psamadh1)
pdb|3IWK|C Chain C, Crystal Structure Of Aminoaldehyde Dehydrogenase 1 From
Pisum Sativum (Psamadh1)
pdb|3IWK|D Chain D, Crystal Structure Of Aminoaldehyde Dehydrogenase 1 From
Pisum Sativum (Psamadh1)
pdb|3IWK|E Chain E, Crystal Structure Of Aminoaldehyde Dehydrogenase 1 From
Pisum Sativum (Psamadh1)
pdb|3IWK|F Chain F, Crystal Structure Of Aminoaldehyde Dehydrogenase 1 From
Pisum Sativum (Psamadh1)
pdb|3IWK|G Chain G, Crystal Structure Of Aminoaldehyde Dehydrogenase 1 From
Pisum Sativum (Psamadh1)
pdb|3IWK|H Chain H, Crystal Structure Of Aminoaldehyde Dehydrogenase 1 From
Pisum Sativum (Psamadh1)
pdb|3IWK|I Chain I, Crystal Structure Of Aminoaldehyde Dehydrogenase 1 From
Pisum Sativum (Psamadh1)
pdb|3IWK|J Chain J, Crystal Structure Of Aminoaldehyde Dehydrogenase 1 From
Pisum Sativum (Psamadh1)
pdb|3IWK|K Chain K, Crystal Structure Of Aminoaldehyde Dehydrogenase 1 From
Pisum Sativum (Psamadh1)
pdb|3IWK|L Chain L, Crystal Structure Of Aminoaldehyde Dehydrogenase 1 From
Pisum Sativum (Psamadh1)
Length = 503
Score = 281 bits (720), Expect = 5e-76, Method: Compositional matrix adjust.
Identities = 171/495 (34%), Positives = 249/495 (50%), Gaps = 66/495 (13%)
Query: 61 VKVDYTQLLINGQFVDSASGKTFPTLDPRTGDVITHVAEGEAEDVNRAVSAARKAFDEG- 119
+ V QL I+G++ K P ++P T ++I + EDV+ AV AA++A
Sbjct: 3 ITVSSRQLFIDGEWRVPILNKRIPNINPSTENIIGDIPAATKEDVDLAVDAAKRAISRKN 62
Query: 120 --PWPRMTAYERSKIILRFADLLERHNDEIAALETWDNGKPFEQSAQTEVPMTTRLFRYY 177
W + R++ + A ++ DE+ LE+ D GKP E+ A ++ F YY
Sbjct: 63 GRDWSAASGSLRARYLRAIAAKIKEKKDELGKLESIDCGKPLEE-ALADLDDVVACFEYY 121
Query: 178 AGWADKIQG-----LTAPADGPYHVQTLHEPIGVA------------------------- 207
AG A+++ ++ P D + L EPIGV
Sbjct: 122 AGLAEELDSKQKAPISLPMD-TFKSYILKEPIGVVALITPWNYPFLMATWKIAPALAAGC 180
Query: 208 ----------------------------GVLNIVSGYGPTAGAALASHMEVDKLAFTGST 239
GVLNIV+G G AGA+LASH +VDK++FTGS+
Sbjct: 181 AAILKPSELASVTCLELGEICKEVGLPRGVLNIVTGLGHEAGASLASHPDVDKISFTGSS 240
Query: 240 TTGKIVLQLAAKSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSR 299
TG ++ AA+ +KPV+LELGGKSP +V ED D+DK AE + FF GQ C A SR
Sbjct: 241 ATGSKIMTTAAQL-VKPVSLELGGKSPIVVFEDVDLDKVAEWTVFGCFFTNGQICSATSR 299
Query: 300 TFVHESVYDQFVEKANALAMKRVVGDPFKGGIQQGPQIDSEQFEKILKYIRSGVDGGAKL 359
VHES+ +FV+K A + DP + G + GP + Q++K+L I S GA +
Sbjct: 300 LIVHESIAVEFVDKLVKWAENIKISDPLEEGCRLGPIVSEAQYKKVLNCISSAKSEGATI 359
Query: 360 ETGGERLG--AKGYYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYKDLDEVIQRSNASQY 417
TGG R KGY+++PT+ T V M I ++E+FGPV ++ + +E I +N + Y
Sbjct: 360 LTGGRRPEHLKKGYFVEPTIITDVTTSMQIWREEVFGPVLAVKTFSTEEEAINLANDTHY 419
Query: 418 GLAAGVFTHNLDTANTLMRALRVGSVWINCFDVFDAAIPFGGYKQSGQGREKGSYSLSNY 477
GL + V +++L+ L +AL+ G VWINC P+GG K+SG GRE G + L NY
Sbjct: 420 GLGSAVMSNDLERCERLSKALQAGIVWINCAQPSFIQAPWGGIKRSGFGRELGEWGLENY 479
Query: 478 LQVKAVVTALKNPAW 492
L VK V + W
Sbjct: 480 LSVKQVTRYTSDEPW 494
>pdb|3IWJ|A Chain A, Crystal Structure Of Aminoaldehyde Dehydrogenase 2 From
Pisum Sativum (Psamadh2)
pdb|3IWJ|B Chain B, Crystal Structure Of Aminoaldehyde Dehydrogenase 2 From
Pisum Sativum (Psamadh2)
Length = 503
Score = 279 bits (713), Expect = 3e-75, Method: Compositional matrix adjust.
Identities = 167/494 (33%), Positives = 247/494 (50%), Gaps = 64/494 (12%)
Query: 61 VKVDYTQLLINGQFVDSASGKTFPTLDPRTGDVITHVAEGEAEDVNRAVSAARKAFDEGP 120
+ + QL ING + K P ++P T ++I + EDV+ AV+AA+ A
Sbjct: 3 IPIPTRQLFINGDWKAPVLNKRIPVINPATQNIIGDIPAATKEDVDVAVAAAKTALTRNK 62
Query: 121 ---WPRMTAYERSKIILRFADLLERHNDEIAALETWDNGKPFEQSAQTEVPMTTRLFRYY 177
W + R++ + A + E+A LE+ D GKP +++A ++ F YY
Sbjct: 63 GADWATASGAVRARYLRAIAAKVTEKKPELAKLESIDCGKPLDEAAW-DIDDVAGCFEYY 121
Query: 178 AGWADKIQGL-TAPADGP---YHVQTLHEPIGVAG------------------------- 208
A A+K+ AP P + L EPIGV G
Sbjct: 122 ADLAEKLDARQKAPVSLPMDTFKSHVLREPIGVVGLITPWNYPMLMATWKVAPALAAGCA 181
Query: 209 ----------------------------VLNIVSGYGPTAGAALASHMEVDKLAFTGSTT 240
VLNI++G GP AGA LA+H +VDK+AFTGS+
Sbjct: 182 AILKPSELASLTCLELGEICKEVGLPPGVLNILTGLGPEAGAPLATHPDVDKVAFTGSSA 241
Query: 241 TGKIVLQLAAKSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRT 300
TG ++ AA+ +KPV+LELGGKSP +V ED D+DKAAE A + F+ GQ C A SR
Sbjct: 242 TGSKIMTAAAQL-VKPVSLELGGKSPLVVFEDVDLDKAAEWAIFGCFWTNGQICSATSRL 300
Query: 301 FVHESVYDQFVEKANALAMKRVVGDPFKGGIQQGPQIDSEQFEKILKYIRSGVDGGAKLE 360
+HES+ +F+ + + DP + G + GP + Q+EKILK++ + GA +
Sbjct: 301 ILHESIATEFLNRIVKWIKNIKISDPLEEGCRLGPVVSEGQYEKILKFVSNAKSEGATIL 360
Query: 361 TGGERLG--AKGYYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYKDLDEVIQRSNASQYG 418
TGG R KG++I+PT+ T V +M I ++E+FGPV + + +E I +N + YG
Sbjct: 361 TGGSRPEHLKKGFFIEPTIITDVTTNMQIWREEVFGPVLCVKTFSTEEEAIDLANDTVYG 420
Query: 419 LAAGVFTHNLDTANTLMRALRVGSVWINCFDVFDAAIPFGGYKQSGQGREKGSYSLSNYL 478
L A V +++L+ + +A + G VW+NC P+GG K+SG GRE G + L NYL
Sbjct: 421 LGAAVISNDLERCERVTKAFKAGIVWVNCSQPCFTQAPWGGVKRSGFGRELGEWGLDNYL 480
Query: 479 QVKAVVTALKNPAW 492
VK V + W
Sbjct: 481 SVKQVTQYISEEPW 494
>pdb|2D4E|A Chain A, Crystal Structure Of The Hpcc From Thermus Thermophilus
Hb8
pdb|2D4E|B Chain B, Crystal Structure Of The Hpcc From Thermus Thermophilus
Hb8
pdb|2D4E|C Chain C, Crystal Structure Of The Hpcc From Thermus Thermophilus
Hb8
pdb|2D4E|D Chain D, Crystal Structure Of The Hpcc From Thermus Thermophilus
Hb8
Length = 515
Score = 274 bits (700), Expect = 1e-73, Method: Compositional matrix adjust.
Identities = 172/484 (35%), Positives = 252/484 (52%), Gaps = 67/484 (13%)
Query: 69 LINGQFVDSASGKTFPTLDPRTGDVITHVAEGEAEDVNRAVSAARKAFDEGPWPRMTAYE 128
I G+FV S SG+TFP+LDP T +V+ A G +V+RA AA +AF W R A E
Sbjct: 30 FIAGEFVPSESGETFPSLDPATNEVLGVAARGGEREVDRAAKAAHEAFQR--WSRTKAKE 87
Query: 129 RSKIILRFADLLERHNDEIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADK-IQGL 187
R + +LR A+L+E+H DE+A +E D G+ + + +V F +YA +A+ ++
Sbjct: 88 RKRYLLRIAELIEKHADELAVMECLDAGQVL-RIVRAQVARAAENFAFYAEYAEHAMEDR 146
Query: 188 TAPADGP---YHVQTLHEPIGV-------------------------------------- 206
T P D Y V+ P+G+
Sbjct: 147 TFPVDRDWLYYTVRVPAGPVGIITPWNAPLMLSTWRIAPALAFGNTVVLKPAEWSPFTAT 206
Query: 207 ------------AGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLAAKSNL 254
GV N+V G+G AGAAL +H V L TG T TGKIV++ AA +L
Sbjct: 207 KLAEILKEADLPPGVFNLVQGFGEEAGAALVAHPLVPLLTLTGETETGKIVMRNAA-DHL 265
Query: 255 KPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFVEKA 314
K ++ ELGGKSP +V DAD+++A + + +F G+ C A SR V E +++ FV K
Sbjct: 266 KRLSPELGGKSPALVFADADLERALDAVVFQIFSFNGERCTASSRLLVEEKIFEDFVGKV 325
Query: 315 NALAMKRVVGDPFKGGIQQGPQIDSEQFEKILKYIRSGVDGGAKLETGGERLG------- 367
A VG P + GP I E +++L Y+ +G GA+L GGER
Sbjct: 326 VERARAIRVGHPLDPETEVGPLIHPEHLQRVLGYVEAGKREGARLLVGGERAKTSFRGED 385
Query: 368 -AKGYYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYKDLDEVIQRSNASQYGLAAGVFTH 426
++G Y+ PTVF G ++ M IA++EIFGPV + +KD +E ++++N ++YGLAA VFT
Sbjct: 386 LSRGNYLLPTVFVG-ENHMKIAQEEIFGPVLVAIPFKDEEEALRKANDTKYGLAAYVFTR 444
Query: 427 NLDTANTLMRALRVGSVWINCFDVFDAAIPFGGYKQSGQGREKGSYSLSNYLQVKAVVTA 486
+L+ A+ L L G V++N +V PFGG K SG RE G+Y+L Y +K +
Sbjct: 445 DLERAHRLALELEAGMVYLNSHNVRHLPTPFGGVKGSGDRREGGTYALDFYTDLKTIALP 504
Query: 487 LKNP 490
L+ P
Sbjct: 505 LRPP 508
>pdb|3U4J|A Chain A, Crystal Structure Of Nad-Dependent Aldehyde Dehydrogenase
From Sinorhizobium Meliloti
pdb|3U4J|B Chain B, Crystal Structure Of Nad-Dependent Aldehyde Dehydrogenase
From Sinorhizobium Meliloti
pdb|3U4J|C Chain C, Crystal Structure Of Nad-Dependent Aldehyde Dehydrogenase
From Sinorhizobium Meliloti
pdb|3U4J|D Chain D, Crystal Structure Of Nad-Dependent Aldehyde Dehydrogenase
From Sinorhizobium Meliloti
Length = 528
Score = 273 bits (699), Expect = 1e-73, Method: Compositional matrix adjust.
Identities = 183/481 (38%), Positives = 254/481 (52%), Gaps = 58/481 (12%)
Query: 67 QLLINGQFVDSASGKTFPTLDP-RTGDVITHVAEGEAEDVNRAVSAARKAFDEGPWPRMT 125
Q L++G+ VD+ASG T + P G+V+ E A+DV +AV+AARKAFD GPWPR +
Sbjct: 24 QXLVDGKSVDAASGSTIDRVSPGHAGEVVGTWPEASADDVRKAVAAARKAFDAGPWPRXS 83
Query: 126 AYERSKIILRFADLLERHNDEIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADKIQ 185
ERS++ + ADL+ +E+A +E+ + GKP Q A+ E+ L+ Y AG A ++
Sbjct: 84 GAERSRLXFKVADLILARQEELALIESLEVGKPIAQ-ARGEIGFCADLWSYAAGQARALE 142
Query: 186 GLTAPADGPYHVQ-TLHEPIGVAGVL---------------------------------- 210
G T G + L EP+GV G++
Sbjct: 143 GQTHNNIGDDRLGLVLREPVGVVGIITPWNFPFIIASERVPWAIGSGCTVVLKPSEFTSG 202
Query: 211 -------------------NIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLAAK 251
N+V+GYG AG LA VD +AFTGS G + ++AA+
Sbjct: 203 TSIRLAELAREAGIPDGVFNVVTGYGDPAGQVLAEDPNVDXVAFTGSVRVGTKLGEIAAR 262
Query: 252 SNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFV 311
+ +K V LELGGK P IV DAD+D AA+ Y ++ N GQCC +GSR V E + D
Sbjct: 263 T-VKRVGLELGGKGPQIVFADADLDAAADGIAYGVYHNAGQCCISGSRLLVQEGIRDALX 321
Query: 312 EKANALAMKRVVGDPFKGGIQQGPQIDSEQFEKILKYIRSGVDGGAKLETGGERLGAK-G 370
E+ ++ K GDP + G I EK+ Y+ +G+ GA+L GGER+G + G
Sbjct: 322 ERLLDISRKVAFGDPLNERTKIGAXISEAHAEKVHSYVTAGITSGAELLLGGERIGREAG 381
Query: 371 YYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYKDLDEVIQRSNASQYGLAAGVFTHNLDT 430
Y PTVF GV D IA++EIFGPV S L +K DE + +NA+++GL+A V++ NL+T
Sbjct: 382 LYYAPTVFAGVTPDXSIAREEIFGPVLSTLTFKTADEAVALANATEFGLSASVWSTNLET 441
Query: 431 ANTLMRALRVGSVWINCFDVFDAAIPFGGYKQSGQGREKGSYSLSNYLQVKAVVTALKNP 490
A +R +R G WIN +P GGYK+SG GRE G Y Y Q K V L P
Sbjct: 442 ALQTIRRIRAGRCWINSVIDGTPELPIGGYKKSGLGRELGRYGFDEYSQFKGVHVTLGRP 501
Query: 491 A 491
A
Sbjct: 502 A 502
>pdb|3R31|A Chain A, Crystal Structure Of Betaine Aldehyde Dehydrogenase From
Agrobacterium Tumefaciens
pdb|3R31|B Chain B, Crystal Structure Of Betaine Aldehyde Dehydrogenase From
Agrobacterium Tumefaciens
Length = 517
Score = 265 bits (676), Expect = 6e-71, Method: Compositional matrix adjust.
Identities = 160/472 (33%), Positives = 240/472 (50%), Gaps = 62/472 (13%)
Query: 69 LINGQFVDSASGKTFPTLDPRTGDVITHVAEGEAEDVNRAVSAARKAFDEGPWPRMTAYE 128
I+G +V+ +G F ++ P TG++I + V RA+++A++A E W M+
Sbjct: 18 FIDGDYVEDNTGTPFESIFPATGEMIAKLHAATPAIVERAIASAKRAQKE--WAAMSPMA 75
Query: 129 RSKIILRFADLLERHNDEIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWA-DKIQGL 187
R +I+ R AD++ ND ++ LET D GKP +++ + F ++ G A + G
Sbjct: 76 RGRILKRAADIMRERNDALSTLETLDTGKPIQETIVADPTSGADAFEFFGGIAPSALNGD 135
Query: 188 TAPADGPYHVQTLHEPIGVA---------------------------------------- 207
P G + T P+GV
Sbjct: 136 YIPLGGDF-AYTKRVPLGVCVGIGAWNYPQQIACWKAAPALVAGNAMVFKPSENTPLGAL 194
Query: 208 -------------GVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLAAKSNL 254
G+ N++ G T G L +H +V K++ TGS TG+ V AA +L
Sbjct: 195 KIAEILIEAGLPKGLFNVIQGDRDT-GPLLVNHPDVAKVSLTGSVPTGRKVAA-AAAGHL 252
Query: 255 KPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFVEKA 314
K VT+ELGGKSP IV +DAD++ A A F++ GQ C G+R FV + +F+E
Sbjct: 253 KHVTMELGGKSPMIVFDDADIESAVGGAMLGNFYSSGQVCSNGTRVFVQKKAKARFLENL 312
Query: 315 NALAMKRVVGDPFKGGIQQGPQIDSEQFEKILKYIRSGVDGGAKLETGG---ERLGAKGY 371
++GDP GP + Q EK+L YI G GA L TGG + +G
Sbjct: 313 KRRTEAMILGDPLDYATHLGPLVSKAQQEKVLSYIEKGKAEGATLITGGGIPNNVAGEGA 372
Query: 372 YIKPTVFTGVKDDMLIAKDEIFGPVQSILKYKDLDEVIQRSNASQYGLAAGVFTHNLDTA 431
Y++PTVF V DDM IA++EIFGPV +L + D DEV+ R+NA+++GLA GVFT +L A
Sbjct: 373 YVQPTVFADVTDDMTIAREEIFGPVMCVLDFDDEDEVLARANATEFGLAGGVFTADLARA 432
Query: 432 NTLMRALRVGSVWINCFDVFDAAIPFGGYKQSGQGREKGSYSLSNYLQVKAV 483
+ ++ L G++WIN +++ IPFGG KQSG GRE + +L +Y ++K V
Sbjct: 433 HRVVDGLEAGTLWINTYNLCPVEIPFGGSKQSGFGRENSAAALEHYSELKTV 484
>pdb|4I9B|A Chain A, Structure Of Aminoaldehyde Dehydrogenase 1 From Solanum
Lycopersium (slamadh1) With A Thiohemiacetal
Intermediate
pdb|4I9B|B Chain B, Structure Of Aminoaldehyde Dehydrogenase 1 From Solanum
Lycopersium (slamadh1) With A Thiohemiacetal
Intermediate
Length = 517
Score = 261 bits (667), Expect = 7e-70, Method: Compositional matrix adjust.
Identities = 161/490 (32%), Positives = 242/490 (49%), Gaps = 62/490 (12%)
Query: 54 EDPITPPVKVDYTQLLINGQFVDSASGKTFPTLDPRTGDVITHVAEGEAEDVNRAVSAAR 113
+DP V + QL I G++ + P ++P T ++I + AEDV+ AV AAR
Sbjct: 12 QDPANRNVPIPRRQLYIGGEWREPVKKNRIPIINPATEEIIGDIPAATAEDVDIAVEAAR 71
Query: 114 KAFDEGPWPRMTAYERSKIILRFADLLERHNDEIAALETWDNGKPFEQSAQTEVPMTTRL 173
KA W T +R+K + A + +A LE+ D+GK +SA ++
Sbjct: 72 KAIARDDWGSTTGAQRAKYLRAIAAKVLEKKSVLATLESLDSGKTLYESA-ADMDDVAGC 130
Query: 174 FRYYAGWADKIQGL-TAPAD---GPYHVQTLHEPIGVAGV-------------------- 209
F YYAG A+ + P + Y L EP+GV G+
Sbjct: 131 FEYYAGLAEALDSRRMTPVNLNSDSYKSYVLREPLGVVGLITPWNYPLLMAIWKVAPALA 190
Query: 210 ---------------------------------LNIVSGYGPTAGAALASHMEVDKLAFT 236
LNI++G GP AG LASH VDK++FT
Sbjct: 191 AGCAAILKPSELASITCLELGEICREIGLPSGALNILTGLGPEAGGPLASHPHVDKISFT 250
Query: 237 GSTTTGKIVLQLAAKSNLKPVTLELGGKSPFIVCEDAD-VDKAAELAHYALFFNQGQCCC 295
GS TG ++ AA+ +KPV+LELGGKSP +V +D D +D AAE + +F N GQ C
Sbjct: 251 GSGPTGSKIMTAAAQL-VKPVSLELGGKSPIVVFDDIDNLDIAAEWTLFGIFANTGQVCS 309
Query: 296 AGSRTFVHESVYDQFVEKANALAMKRVVGDPFKGGIQQGPQIDSEQFEKILKYIRSGVDG 355
A SR V E++ F+++ + DP + + GP + + Q+EK+LK+I +
Sbjct: 310 ATSRLIVQENIASAFMDRLLKWTKNIKISDPLEEDCKLGPVVSAGQYEKVLKFISNAKSE 369
Query: 356 GAKLETGGERLG--AKGYYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYKDLDEVIQRSN 413
GA + GGER KGYY++PT+ T V M I K+E+FGPV + +K ++ I+ +N
Sbjct: 370 GATILCGGERPQHLKKGYYVQPTIITDVNTSMEIWKEEVFGPVLCVKTFKTEEQAIELAN 429
Query: 414 ASQYGLAAGVFTHNLDTANTLMRALRVGSVWINCFDVFDAAIPFGGYKQSGQGREKGSYS 473
++YGL A V + ++ +A + G +WINC +P+GG K+SG GR+ G +
Sbjct: 430 DTKYGLGAAVMSKDVKRCERFTKAFQTGIIWINCSQPTFNELPWGGKKRSGFGRDLGKWG 489
Query: 474 LSNYLQVKAV 483
L N+L +K V
Sbjct: 490 LENFLNIKQV 499
>pdb|4I8Q|A Chain A, Structure Of The Aminoaldehyde Dehydrogenase 1 E260a
Mutant From Solanum Lycopersicum (slamadh1-e260a)
Length = 514
Score = 258 bits (660), Expect = 4e-69, Method: Compositional matrix adjust.
Identities = 160/490 (32%), Positives = 241/490 (49%), Gaps = 62/490 (12%)
Query: 54 EDPITPPVKVDYTQLLINGQFVDSASGKTFPTLDPRTGDVITHVAEGEAEDVNRAVSAAR 113
+DP V + QL I G++ + P ++P T ++I + AEDV+ AV AAR
Sbjct: 12 QDPANRNVPIPRRQLYIGGEWREPVKKNRIPIINPATEEIIGDIPAATAEDVDIAVEAAR 71
Query: 114 KAFDEGPWPRMTAYERSKIILRFADLLERHNDEIAALETWDNGKPFEQSAQTEVPMTTRL 173
KA W T +R+K + A + +A LE+ D+GK +SA ++
Sbjct: 72 KAIARDDWGSTTGAQRAKYLRAIAAKVLEKKSVLATLESLDSGKTLYESA-ADMDDVAGC 130
Query: 174 FRYYAGWADKIQGL-TAPAD---GPYHVQTLHEPIGVAGV-------------------- 209
F YYAG A+ + P + Y L EP+GV G+
Sbjct: 131 FEYYAGLAEALDSRRMTPVNLNSDSYKSYVLREPLGVVGLITPWNYPLLMAIWKVAPALA 190
Query: 210 ---------------------------------LNIVSGYGPTAGAALASHMEVDKLAFT 236
LNI++G GP AG LASH VDK++FT
Sbjct: 191 AGCAAILKPSELASITCLELGEICREIGLPSGALNILTGLGPEAGGPLASHPHVDKISFT 250
Query: 237 GSTTTGKIVLQLAAKSNLKPVTLELGGKSPFIVCEDAD-VDKAAELAHYALFFNQGQCCC 295
GS TG ++ AA+ +KPV+L LGGKSP +V +D D +D AAE + +F N GQ C
Sbjct: 251 GSGPTGSKIMTAAAQL-VKPVSLALGGKSPIVVFDDIDNLDIAAEWTLFGIFANTGQVCS 309
Query: 296 AGSRTFVHESVYDQFVEKANALAMKRVVGDPFKGGIQQGPQIDSEQFEKILKYIRSGVDG 355
A SR V E++ F+++ + DP + + GP + + Q+EK+LK+I +
Sbjct: 310 ATSRLIVQENIASAFMDRLLKWTKNIKISDPLEEDCKLGPVVSAGQYEKVLKFISNAKSE 369
Query: 356 GAKLETGGERLG--AKGYYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYKDLDEVIQRSN 413
GA + GGER KGYY++PT+ T V M I K+E+FGPV + +K ++ I+ +N
Sbjct: 370 GATILCGGERPQHLKKGYYVQPTIITDVNTSMEIWKEEVFGPVLCVKTFKTEEQAIELAN 429
Query: 414 ASQYGLAAGVFTHNLDTANTLMRALRVGSVWINCFDVFDAAIPFGGYKQSGQGREKGSYS 473
++YGL A V + ++ +A + G +WINC +P+GG K+SG GR+ G +
Sbjct: 430 DTKYGLGAAVMSKDVKRCERFTKAFQTGIIWINCSQPTFNELPWGGKKRSGFGRDLGKWG 489
Query: 474 LSNYLQVKAV 483
L N+L +K V
Sbjct: 490 LENFLNIKQV 499
>pdb|1A4S|A Chain A, Betaine Aldehyde Dehydrogenase From Cod Liver
pdb|1A4S|B Chain B, Betaine Aldehyde Dehydrogenase From Cod Liver
pdb|1A4S|C Chain C, Betaine Aldehyde Dehydrogenase From Cod Liver
pdb|1A4S|D Chain D, Betaine Aldehyde Dehydrogenase From Cod Liver
pdb|1BPW|A Chain A, Betaine Aldehyde Dehydrogenase From Cod Liver
pdb|1BPW|B Chain B, Betaine Aldehyde Dehydrogenase From Cod Liver
pdb|1BPW|C Chain C, Betaine Aldehyde Dehydrogenase From Cod Liver
pdb|1BPW|D Chain D, Betaine Aldehyde Dehydrogenase From Cod Liver
Length = 503
Score = 258 bits (659), Expect = 6e-69, Method: Compositional matrix adjust.
Identities = 156/476 (32%), Positives = 237/476 (49%), Gaps = 65/476 (13%)
Query: 72 GQFVDSASGKTF-PTLDPRTGDVITHVAEGEAEDVNRAVSAARKAFDEGPWPRMTAYERS 130
G+ + S G T P +P TG V+ + AE+V++AV +A+ A+ + W +M ERS
Sbjct: 26 GRRIKSKDGATTEPVFEPATGRVLCQMVPCGAEEVDQAVQSAQAAYLK--WSKMAGIERS 83
Query: 131 KIILRFADLLERHNDEIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADKIQGLTAP 190
+++L A ++ D IA LE +NGK + A+ ++ + YYAG A + G
Sbjct: 84 RVMLEAARIIRERRDNIAKLEVINNGKTITE-AEYDIDAAWQCIEYYAGLAPTLSGQHIQ 142
Query: 191 ADGPYHVQTLHEPIGVA------------------------------------------- 207
G T EP+GV
Sbjct: 143 LPGGAFAYTRREPLGVCAGILAWNYPFMIAAWKCAPALACGNAVVFKPSPMTPVTGVILA 202
Query: 208 ----------GVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLAAKSNLKPV 257
G++N+V G G G+ L H V K++FTGS TGK V++++AK+ +K V
Sbjct: 203 EIFHEAGVPVGLVNVVQG-GAETGSLLCHHPNVAKVSFTGSVPTGKKVMEMSAKT-VKHV 260
Query: 258 TLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFVEKANAL 317
TLELGGKSP ++ +D +++ A A A F QGQ C G+R FV + QF+E+
Sbjct: 261 TLELGGKSPLLIFKDCELENAVRGALMANFLTQGQVCTNGTRVFVQREIMPQFLEEVVKR 320
Query: 318 AMKRVVGDPFKGGIQQGPQIDSEQFEKILKYIRSGVDGGAKLETGGERLG------AKGY 371
VVGDP + G I Q +K+L ++ GA++ GGE L GY
Sbjct: 321 TKAIVVGDPLLTETRMGGLISKPQLDKVLGFVAQAKKEGARVLCGGEPLTPSDPKLKNGY 380
Query: 372 YIKPTVFTGVKDDMLIAKDEIFGPVQSILKYKDLDEVIQRSNASQYGLAAGVFTHNLDTA 431
++ P V +DDM K+EIFGPV S+L + +EV+QR+N + +GLA+GVFT ++ A
Sbjct: 381 FMSPCVLDNCRDDMTCVKEEIFGPVMSVLPFDTEEEVLQRANNTTFGLASGVFTRDISRA 440
Query: 432 NTLMRALRVGSVWINCFDVFDAAIPFGGYKQSGQGREKGSYSLSNYLQVKAVVTAL 487
+ + L G+ +IN + + +PFGGYK SG GRE G ++ Y Q+K V+ +
Sbjct: 441 HRVAANLEAGTCYINTYSISPVEVPFGGYKMSGFGRENGQATVDYYSQLKTVIVEM 496
>pdb|3ED6|A Chain A, 1.7 Angstrom Resolution Crystal Structure Of Betaine
Aldehyde Dehydrogenase (Betb) From Staphylococcus Aureus
pdb|3ED6|B Chain B, 1.7 Angstrom Resolution Crystal Structure Of Betaine
Aldehyde Dehydrogenase (Betb) From Staphylococcus Aureus
pdb|3FG0|A Chain A, 1.85 Angstrom Resolution Crystal Structure Of Betaine
Aldehyde Dehydrogenase (Betb) From Staphylococcus Aureus
(Idp00699) In Complex With Nad+
pdb|3FG0|B Chain B, 1.85 Angstrom Resolution Crystal Structure Of Betaine
Aldehyde Dehydrogenase (Betb) From Staphylococcus Aureus
(Idp00699) In Complex With Nad+
pdb|3FG0|C Chain C, 1.85 Angstrom Resolution Crystal Structure Of Betaine
Aldehyde Dehydrogenase (Betb) From Staphylococcus Aureus
(Idp00699) In Complex With Nad+
pdb|3FG0|D Chain D, 1.85 Angstrom Resolution Crystal Structure Of Betaine
Aldehyde Dehydrogenase (Betb) From Staphylococcus Aureus
(Idp00699) In Complex With Nad+
pdb|3FG0|E Chain E, 1.85 Angstrom Resolution Crystal Structure Of Betaine
Aldehyde Dehydrogenase (Betb) From Staphylococcus Aureus
(Idp00699) In Complex With Nad+
pdb|3FG0|F Chain F, 1.85 Angstrom Resolution Crystal Structure Of Betaine
Aldehyde Dehydrogenase (Betb) From Staphylococcus Aureus
(Idp00699) In Complex With Nad+
pdb|3FG0|G Chain G, 1.85 Angstrom Resolution Crystal Structure Of Betaine
Aldehyde Dehydrogenase (Betb) From Staphylococcus Aureus
(Idp00699) In Complex With Nad+
pdb|3FG0|H Chain H, 1.85 Angstrom Resolution Crystal Structure Of Betaine
Aldehyde Dehydrogenase (Betb) From Staphylococcus Aureus
(Idp00699) In Complex With Nad+
Length = 520
Score = 254 bits (648), Expect = 1e-67, Method: Compositional matrix adjust.
Identities = 161/475 (33%), Positives = 242/475 (50%), Gaps = 62/475 (13%)
Query: 70 INGQFVDSASGKTFPTLDPRTGDVITHVAEGEAEDVNRAVSAARKAFDEGPWPRMTAYER 129
I+G++V+SA+ T ++P +VI V+EG ED RA+ AAR+AF+ G W + TA R
Sbjct: 37 IDGEWVESANKNTRDIINPYNQEVIFTVSEGTKEDAERAILAARRAFESGEWSQETAETR 96
Query: 130 SKIILRFADLLERHNDEIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADKIQGLTA 189
K + AD ++ H + +A LET D GK E+S ++ +F Y+AG ADK G
Sbjct: 97 GKKVRAIADKIKEHREALARLETLDTGKTLEES-YADMDDIHNVFMYFAGLADKDGGEMI 155
Query: 190 PADGP-YHVQTLHEPIGVA----------------------------------------- 207
+ P + + EP+GV
Sbjct: 156 DSPIPDTESKIVKEPVGVVTQITPWNYPLLQASWKIAPALATGCSLVMKPSEITPLTTIR 215
Query: 208 ------------GVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLAAKSNLK 255
G +N++ G G G ++ H EVD ++FTG TGK +++ AA +N+
Sbjct: 216 VFELMEEVGFPKGTINLILGAGSEVGDVMSGHKEVDLVSFTGGIETGKHIMKNAA-NNVT 274
Query: 256 PVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFVEKAN 315
+ LELGGK+P I+ +DAD + A + A +F+ GQ C AGSR V S+ D+F E+A
Sbjct: 275 NIALELGGKNPNIIFDDADFELAVDQALNGGYFHAGQVCSAGSRILVQNSIKDKF-EQAL 333
Query: 316 ALAMKRV-VGDPFKGGIQQGPQIDSEQFEKILKYIRSGVDGGAKLETGGERLG----AKG 370
+K++ +G+ F + GP I +E KI Y+ GA + GG+R G
Sbjct: 334 IDRVKKIKLGNGFDADTEMGPVISTEHRNKIESYMDVAKAEGATIAVGGKRPDRDDLKDG 393
Query: 371 YYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYKDLDEVIQRSNASQYGLAAGVFTHNLDT 430
+ +PTV T M I ++E+FGPV ++ ++ E IQ +N S YGLA VF+ ++
Sbjct: 394 LFFEPTVITNCDTSMRIVQEEVFGPVVTVEGFETEQEAIQLANDSIYGLAGAVFSKDIGK 453
Query: 431 ANTLMRALRVGSVWINCFDVFDAAIPFGGYKQSGQGREKGSYSLSNYLQVKAVVT 485
A + L++G+VWIN F + A P+GGYKQSG GRE G L YL K ++T
Sbjct: 454 AQRVANKLKLGTVWINDFHPYFAQAPWGGYKQSGIGRELGKEGLEEYLVSKHILT 508
>pdb|4I8P|A Chain A, Crystal Structure Of Aminoaldehyde Dehydrogenase 1a From
Zea Mays (zmamadh1a)
pdb|4I8P|B Chain B, Crystal Structure Of Aminoaldehyde Dehydrogenase 1a From
Zea Mays (zmamadh1a)
Length = 520
Score = 252 bits (644), Expect = 3e-67, Method: Compositional matrix adjust.
Identities = 169/495 (34%), Positives = 244/495 (49%), Gaps = 64/495 (12%)
Query: 60 PVKVDYTQLLINGQFVDSASGKTFPTLDPRTGDVITHVAEGEAEDVNRAVSAARKAFDEG 119
P V QL ++G++ A G+ P ++P T I + G AEDV+ AV+AAR A
Sbjct: 19 PAMVPLRQLFVDGEWRPPAQGRRLPVVNPTTEAHIGEIPAGTAEDVDAAVAAARAALKRN 78
Query: 120 ---PWPRMTAYERSKIILRFADLLERHNDEIAALETWDNGKPFEQSAQTEVPMTTRLFRY 176
W R R+K + A + E+A LE D GKP++++A ++ F Y
Sbjct: 79 RGRDWARAPGAVRAKYLRAIAAKVIERKPELAKLEALDCGKPYDEAAW-DMDDVAGCFEY 137
Query: 177 YAGWADKI-QGLTAPADGPYHVQTLH---EPIGV-------------------------- 206
+A A+ + + +P P H EPIGV
Sbjct: 138 FADQAEALDKRQNSPVSLPMETFKCHLRREPIGVVGLITPWNYPLLMATWKIAPALAAGC 197
Query: 207 ---------------------------AGVLNIVSGYGPTAGAALASHMEVDKLAFTGST 239
+GVLNIV+G GP AGA L++H +VDK+AFTGS
Sbjct: 198 TAVLKPSELASVTCLELADICKEVGLPSGVLNIVTGLGPDAGAPLSAHPDVDKVAFTGSF 257
Query: 240 TTGKIVLQLAAKSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSR 299
TGK ++ AA +KPVTLELGGKSP +V +D D+DKA E + F+ GQ C A SR
Sbjct: 258 ETGKKIMASAAPM-VKPVTLELGGKSPIVVFDDVDIDKAVEWTLFGCFWTNGQICSATSR 316
Query: 300 TFVHESVYDQFVEKANALAMKRVVGDPFKGGIQQGPQIDSEQFEKILKYIRSGVDGGAKL 359
+H + +F E+ A A V DP + G + GP + Q+EKI K+I + GA +
Sbjct: 317 LLIHTKIAKKFNERMVAWAKNIKVSDPLEEGCRLGPVVSEGQYEKIKKFISNAKSQGATI 376
Query: 360 ETGGERLG--AKGYYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYKDLDEVIQRSNASQY 417
TGG R KG++I+PT+ T + M I ++E+FGPV + ++ DE I+ +N +QY
Sbjct: 377 LTGGVRPAHLEKGFFIEPTIITDITTSMEIWREEVFGPVLCVKEFSTEDEAIELANDTQY 436
Query: 418 GLAAGVFTHNLDTANTLMRALRVGSVWINCFDVFDAAIPFGGYKQSGQGREKGSYSLSNY 477
GLA V + + + L + G +W+NC P+GG K+SG GRE G + NY
Sbjct: 437 GLAGAVISGDRERCQRLSEEIDAGCIWVNCSQPCFCQAPWGGNKRSGFGRELGEGGIDNY 496
Query: 478 LQVKAVVTALKNPAW 492
L VK V + + W
Sbjct: 497 LSVKQVTEYISDEPW 511
>pdb|3JZ4|C Chain C, Crystal Structure Of E. Coli Nadp Dependent Enzyme
Length = 481
Score = 239 bits (611), Expect = 2e-63, Method: Compositional matrix adjust.
Identities = 148/475 (31%), Positives = 236/475 (49%), Gaps = 58/475 (12%)
Query: 67 QLLINGQFVDSASGKTFPTLDPRTGDVITHVAEGEAEDVNRAVSAARKAFDEGPWPRMTA 126
Q LING+++D+ +G+ +P GD + V + A++ A+ AA +A W +TA
Sbjct: 11 QALINGEWLDANNGEAIDVTNPANGDKLGSVPKMGADETRAAIDAANRALP--AWRALTA 68
Query: 127 YERSKIILRFADLLERHNDEIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADKIQG 186
ER+ I+ + +L+ H D++A L T + GKP + A+ E+ ++A +I G
Sbjct: 69 KERATILRNWFNLMMEHQDDLARLMTLEQGKPLAE-AKGEISYAASFIEWFAEEGKRIYG 127
Query: 187 LTAPA-DGPYHVQTLHEPIGV--------------------------------------- 206
T P + + +PIGV
Sbjct: 128 DTIPGHQADKRLIVIKQPIGVTAAITPWNFPAAMITRKAGPALAAGCTMVLKPASQTPFS 187
Query: 207 --------------AGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLAAKS 252
AGV N+V+G G L S+ V KL+FTGST G+ +++ AK
Sbjct: 188 ALALAELAIRAGVPAGVFNVVTGSAGAVGNELTSNPLVRKLSFTGSTEIGRQLMEQCAK- 246
Query: 253 NLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFVE 312
++K V+LELGG +PFIV +DAD+DKA E A + F N GQ C +R +V + VYD+F E
Sbjct: 247 DIKKVSLELGGNAPFIVFDDADLDKAVEGALASKFRNAGQTCVCANRLYVQDGVYDRFAE 306
Query: 313 KANALAMKRVVGDPFKGGIQQGPQIDSEQFEKILKYIRSGVDGGAKLETGGERLGAKGYY 372
K K +GD G+ GP ID + K+ ++I ++ GA++ GG+ G +
Sbjct: 307 KLQQAMSKLHIGDGLDNGVTIGPLIDEKAVAKVEEHIADALEKGARVVCGGKAHERGGNF 366
Query: 373 IKPTVFTGVKDDMLIAKDEIFGPVQSILKYKDLDEVIQRSNASQYGLAAGVFTHNLDTAN 432
+PT+ V + ++K+E FGP+ + ++KD +VI ++N +++GLAA + +L
Sbjct: 367 FQPTILVDVPANAKVSKEETFGPLAPLFRFKDEADVIAQANDTEFGLAAYFYARDLSRVF 426
Query: 433 TLMRALRVGSVWINCFDVFDAAIPFGGYKQSGQGREKGSYSLSNYLQVKAVVTAL 487
+ AL G V IN + + PFGG K SG GRE Y + +YL++K + L
Sbjct: 427 RVGEALEYGIVGINTGIISNEVAPFGGIKASGLGREGSKYGIEDYLEIKYMCIGL 481
>pdb|3TY7|A Chain A, Crystal Structure Of Aldehyde Dehydrogenase Family Protein
From Staphylococcus Aureus
pdb|3TY7|B Chain B, Crystal Structure Of Aldehyde Dehydrogenase Family Protein
From Staphylococcus Aureus
Length = 478
Score = 239 bits (611), Expect = 2e-63, Method: Compositional matrix adjust.
Identities = 160/478 (33%), Positives = 239/478 (50%), Gaps = 58/478 (12%)
Query: 64 DYTQLLINGQFVDSASGKTFPTLDPRTGDVITHVAEGEAEDVNRAVSAARKAFDEGPWPR 123
DYT+ ING++V+S S +T ++P T +VI VA+G DV++AV AA + E +
Sbjct: 6 DYTKQYINGEWVESNSNETIEVINPATEEVIGKVAKGNKADVDKAVEAADDVYLE--FRH 63
Query: 124 MTAYERSKIILRFADLLERHNDEIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADK 183
+ ER ++ + E D+I T + G P S + F D
Sbjct: 64 TSVKERQALLDKIVKEYENRKDDIVQAITDELGAPLSLSERVHYQXGLNHFVAARDALDN 123
Query: 184 ------------------IQGLTAPADGPYHVQTLH------------------------ 201
+ GL P + P + +L
Sbjct: 124 YEFEERRGDDLVVKEAIGVSGLITPWNFPTNQTSLKLAAAFAAGSPVVLKPSEETPFAAV 183
Query: 202 ------EPIGV-AGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLAAKSNL 254
+ +GV GV N+V+G G G L+ H +V +FTGS TG + + AAK +
Sbjct: 184 ILAEIFDKVGVPKGVFNLVNGDGAGVGNPLSEHPKVRXXSFTGSGPTGSKIXEKAAK-DF 242
Query: 255 KPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFVEKA 314
K V+LELGGKSP+IV +D D+ +AA+ + N GQ C AG+R V + D F+ +
Sbjct: 243 KKVSLELGGKSPYIVLDDVDIKEAAKATTGKVVNNTGQVCTAGTRVLVPNKIKDAFLAEL 302
Query: 315 NALAMKRVVGDPFKGGIQQGPQIDSEQFEKILKYIRSGVDGGAKLETGG----ERLGAKG 370
+ VG+P + G Q GP I +QF+++ YI G++ GA+L GG E L KG
Sbjct: 303 KEQFSQVRVGNPREDGTQVGPIISKKQFDQVQNYINKGIEEGAELFYGGPGKPEGL-EKG 361
Query: 371 YYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYKDLDEVIQRSNASQYGLAAGVFTHNLDT 430
Y+ +PT+F V + IA++EIFGPV S++ Y DLDE IQ +N ++YGLA V + +T
Sbjct: 362 YFARPTIFINVDNQXTIAQEEIFGPVXSVITYNDLDEAIQIANDTKYGLAGYVIGKDKET 421
Query: 431 ANTLMRALRVGSVWINCFDVFDAAIPFGGYKQSGQGREKGSYSLSNYLQVKAVVTALK 488
+ + R++ G+V IN +PFGGYKQSG GRE G Y + +L+VK++ K
Sbjct: 422 LHKVARSIEAGTVEINEAG-RKPDLPFGGYKQSGLGREWGDYGIEEFLEVKSIAGYFK 478
>pdb|3JZ4|A Chain A, Crystal Structure Of E. Coli Nadp Dependent Enzyme
pdb|3JZ4|B Chain B, Crystal Structure Of E. Coli Nadp Dependent Enzyme
pdb|3JZ4|D Chain D, Crystal Structure Of E. Coli Nadp Dependent Enzyme
Length = 481
Score = 239 bits (610), Expect = 2e-63, Method: Compositional matrix adjust.
Identities = 148/475 (31%), Positives = 236/475 (49%), Gaps = 58/475 (12%)
Query: 67 QLLINGQFVDSASGKTFPTLDPRTGDVITHVAEGEAEDVNRAVSAARKAFDEGPWPRMTA 126
Q LING+++D+ +G+ +P GD + V + A++ A+ AA +A W +TA
Sbjct: 11 QALINGEWLDANNGEAIDVTNPANGDKLGSVPKMGADETRAAIDAANRALP--AWRALTA 68
Query: 127 YERSKIILRFADLLERHNDEIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADKIQG 186
ER+ I+ + +L+ H D++A L T + GKP + A+ E+ ++A +I G
Sbjct: 69 KERATILRNWFNLMMEHQDDLARLMTLEQGKPLAE-AKGEISYAASFIEWFAEEGKRIYG 127
Query: 187 LTAPA-DGPYHVQTLHEPIGV--------------------------------------- 206
T P + + +PIGV
Sbjct: 128 DTIPGHQADKRLIVIKQPIGVTAAITPWNFPAAMITRKAGPALAAGCTMVLKPASQTPFS 187
Query: 207 --------------AGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLAAKS 252
AGV N+V+G G L S+ V KL+FTGST G+ +++ AK
Sbjct: 188 ALALAELAIRAGVPAGVFNVVTGSAGAVGNELTSNPLVRKLSFTGSTEIGRQLMEQCAK- 246
Query: 253 NLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFVE 312
++K V+LELGG +PFIV +DAD+DKA E A + F N GQ C +R +V + VYD+F E
Sbjct: 247 DIKKVSLELGGNAPFIVFDDADLDKAVEGALASKFRNAGQTCVCANRLYVQDGVYDRFAE 306
Query: 313 KANALAMKRVVGDPFKGGIQQGPQIDSEQFEKILKYIRSGVDGGAKLETGGERLGAKGYY 372
K K +GD G+ GP ID + K+ ++I ++ GA++ GG+ G +
Sbjct: 307 KLQQAMSKLHIGDGLDNGVTIGPLIDEKAVAKVEEHIADALEKGARVVCGGKAHERGGNF 366
Query: 373 IKPTVFTGVKDDMLIAKDEIFGPVQSILKYKDLDEVIQRSNASQYGLAAGVFTHNLDTAN 432
+PT+ V + ++K+E FGP+ + ++KD +VI ++N +++GLAA + +L
Sbjct: 367 FQPTILVDVPANAKVSKEETFGPLAPLFRFKDEADVIAQANDTEFGLAAYFYARDLSRVF 426
Query: 433 TLMRALRVGSVWINCFDVFDAAIPFGGYKQSGQGREKGSYSLSNYLQVKAVVTAL 487
+ AL G V IN + + PFGG K SG GRE Y + +YL++K + L
Sbjct: 427 RVGEALEYGIVGINTGIISNEVAPFGGIKASGLGREGSKYGIEDYLEIKYMCIGL 481
>pdb|3EK1|A Chain A, Crystal Structure Of Aldehyde Dehydrogenase From Brucella
Melitensis Biovar Abortus 2308
pdb|3EK1|B Chain B, Crystal Structure Of Aldehyde Dehydrogenase From Brucella
Melitensis Biovar Abortus 2308
pdb|3EK1|C Chain C, Crystal Structure Of Aldehyde Dehydrogenase From Brucella
Melitensis Biovar Abortus 2308
pdb|3EK1|D Chain D, Crystal Structure Of Aldehyde Dehydrogenase From Brucella
Melitensis Biovar Abortus 2308
pdb|3EK1|E Chain E, Crystal Structure Of Aldehyde Dehydrogenase From Brucella
Melitensis Biovar Abortus 2308
pdb|3EK1|F Chain F, Crystal Structure Of Aldehyde Dehydrogenase From Brucella
Melitensis Biovar Abortus 2308
pdb|3EK1|G Chain G, Crystal Structure Of Aldehyde Dehydrogenase From Brucella
Melitensis Biovar Abortus 2308
pdb|3EK1|H Chain H, Crystal Structure Of Aldehyde Dehydrogenase From Brucella
Melitensis Biovar Abortus 2308
Length = 504
Score = 235 bits (599), Expect = 4e-62, Method: Compositional matrix adjust.
Identities = 159/477 (33%), Positives = 238/477 (49%), Gaps = 60/477 (12%)
Query: 66 TQLLINGQFVDSASGKTFPTLDPRTGDVITHVAEGEAEDVNRAVSAARKAFDEGPWPRMT 125
+Q L+NG+++D+A G T +P G VI V + A+ A+ KA W T
Sbjct: 33 SQCLVNGRWIDAADGTTIKVTNPADGSVIGTVPSLSVATIKEAIDASAKALSG--WAAKT 90
Query: 126 AYERSKIILRFADLLERHNDEIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADKIQ 185
A ER+ I+ ++ DL+ + D+IA + T + GKP + A+ EV ++A A ++
Sbjct: 91 AKERAGILRKWFDLIIANADDIALIMTSEQGKPLAE-ARGEVLYAASFIEWFAEEAKRVY 149
Query: 186 GLTAPA-DGPYHVQTLHEPIGV-------------------------------------- 206
G T PA + + +P+GV
Sbjct: 150 GDTIPAPQNGQRLTVIRQPVGVTAAITPWNFPAAMITRKAAPALAAGCTMIVRPADLTPL 209
Query: 207 ---------------AGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLAAK 251
AGVL IV+G GA L S+ V KL+FTGST G++++ A
Sbjct: 210 TALALGVLAEKAGIPAGVLQIVTGKAREIGAELTSNDTVRKLSFTGSTEVGRLLMAQCAP 269
Query: 252 SNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFV 311
+ +K ++LELGG +PFIV +DAD+D A + A + + N GQ C +R +V VYD+F
Sbjct: 270 T-IKRISLELGGNAPFIVFDDADLDAAVDGAMVSKYRNAGQTCVCANRIYVQRGVYDKFA 328
Query: 312 EKANALAMKRVVGDPFKGGIQQGPQIDSEQFEKILKYIRSGVDGGAKLETGGERLGAKGY 371
EK A + VG+ + G+ GP I+ + K+ +I V GAKL TGG+ LG G
Sbjct: 329 EKLAAKVKELKVGNGTEPGVVIGPMIEEKAITKVKAHIEDAVSKGAKLITGGKELG--GL 386
Query: 372 YIKPTVFTGVKDDMLIAKDEIFGPVQSILKYKDLDEVIQRSNASQYGLAAGVFTHNLDTA 431
+ +P + TGV DML+AK+E FGP+ + + +EVI ++N + +GLAA +T N A
Sbjct: 387 FFEPGILTGVTSDMLVAKEETFGPLAPLFAFDTEEEVIAQANDTIFGLAAYFYTENFSRA 446
Query: 432 NTLMRALRVGSVWINCFDVFDAAIPFGGYKQSGQGREKGSYSLSNYLQVKAVVTALK 488
+ AL G V N + + PFGG KQSG GRE Y + YL+ K + +A K
Sbjct: 447 IRVSEALEYGMVGHNTGLISNEVAPFGGVKQSGLGREGSKYGIEEYLETKYICSAYK 503
>pdb|3IFG|A Chain A, Crystal Structure Of Succinate-Semialdehyde Dehydrogenase
From Burkholderia Pseudomallei, Part 1 Of 2
pdb|3IFG|B Chain B, Crystal Structure Of Succinate-Semialdehyde Dehydrogenase
From Burkholderia Pseudomallei, Part 1 Of 2
pdb|3IFG|C Chain C, Crystal Structure Of Succinate-Semialdehyde Dehydrogenase
From Burkholderia Pseudomallei, Part 1 Of 2
pdb|3IFG|D Chain D, Crystal Structure Of Succinate-Semialdehyde Dehydrogenase
From Burkholderia Pseudomallei, Part 1 Of 2
pdb|3IFG|E Chain E, Crystal Structure Of Succinate-Semialdehyde Dehydrogenase
From Burkholderia Pseudomallei, Part 1 Of 2
pdb|3IFG|F Chain F, Crystal Structure Of Succinate-Semialdehyde Dehydrogenase
From Burkholderia Pseudomallei, Part 1 Of 2
pdb|3IFG|G Chain G, Crystal Structure Of Succinate-Semialdehyde Dehydrogenase
From Burkholderia Pseudomallei, Part 1 Of 2
pdb|3IFG|H Chain H, Crystal Structure Of Succinate-Semialdehyde Dehydrogenase
From Burkholderia Pseudomallei, Part 1 Of 2
pdb|3IFG|I Chain I, Crystal Structure Of Succinate-Semialdehyde Dehydrogenase
From Burkholderia Pseudomallei, Part 1 Of 2
pdb|3IFG|J Chain J, Crystal Structure Of Succinate-Semialdehyde Dehydrogenase
From Burkholderia Pseudomallei, Part 1 Of 2
pdb|3IFG|K Chain K, Crystal Structure Of Succinate-Semialdehyde Dehydrogenase
From Burkholderia Pseudomallei, Part 1 Of 2
pdb|3IFG|L Chain L, Crystal Structure Of Succinate-Semialdehyde Dehydrogenase
From Burkholderia Pseudomallei, Part 1 Of 2
pdb|3IFG|M Chain M, Crystal Structure Of Succinate-Semialdehyde Dehydrogenase
From Burkholderia Pseudomallei, Part 1 Of 2
pdb|3IFG|N Chain N, Crystal Structure Of Succinate-Semialdehyde Dehydrogenase
From Burkholderia Pseudomallei, Part 1 Of 2
pdb|3IFG|O Chain O, Crystal Structure Of Succinate-Semialdehyde Dehydrogenase
From Burkholderia Pseudomallei, Part 1 Of 2
pdb|3IFG|P Chain P, Crystal Structure Of Succinate-Semialdehyde Dehydrogenase
From Burkholderia Pseudomallei, Part 1 Of 2
pdb|3IFH|Q Chain Q, Crystal Structure Of Succinate-Semialdehyde Dehydrogenase
From Burkholderia Pseudomallei, Part 2 Of 2
pdb|3IFH|R Chain R, Crystal Structure Of Succinate-Semialdehyde Dehydrogenase
From Burkholderia Pseudomallei, Part 2 Of 2
pdb|3IFH|S Chain S, Crystal Structure Of Succinate-Semialdehyde Dehydrogenase
From Burkholderia Pseudomallei, Part 2 Of 2
pdb|3IFH|T Chain T, Crystal Structure Of Succinate-Semialdehyde Dehydrogenase
From Burkholderia Pseudomallei, Part 2 Of 2
pdb|3IFH|U Chain U, Crystal Structure Of Succinate-Semialdehyde Dehydrogenase
From Burkholderia Pseudomallei, Part 2 Of 2
pdb|3IFH|V Chain V, Crystal Structure Of Succinate-Semialdehyde Dehydrogenase
From Burkholderia Pseudomallei, Part 2 Of 2
pdb|3IFH|W Chain W, Crystal Structure Of Succinate-Semialdehyde Dehydrogenase
From Burkholderia Pseudomallei, Part 2 Of 2
pdb|3IFH|X Chain X, Crystal Structure Of Succinate-Semialdehyde Dehydrogenase
From Burkholderia Pseudomallei, Part 2 Of 2
pdb|3IFH|Y Chain Y, Crystal Structure Of Succinate-Semialdehyde Dehydrogenase
From Burkholderia Pseudomallei, Part 2 Of 2
pdb|3IFH|Z Chain Z, Crystal Structure Of Succinate-Semialdehyde Dehydrogenase
From Burkholderia Pseudomallei, Part 2 Of 2
pdb|3IFH|1 Chain 1, Crystal Structure Of Succinate-Semialdehyde Dehydrogenase
From Burkholderia Pseudomallei, Part 2 Of 2
pdb|3IFH|2 Chain 2, Crystal Structure Of Succinate-Semialdehyde Dehydrogenase
From Burkholderia Pseudomallei, Part 2 Of 2
pdb|3IFH|3 Chain 3, Crystal Structure Of Succinate-Semialdehyde Dehydrogenase
From Burkholderia Pseudomallei, Part 2 Of 2
pdb|3IFH|4 Chain 4, Crystal Structure Of Succinate-Semialdehyde Dehydrogenase
From Burkholderia Pseudomallei, Part 2 Of 2
pdb|3IFH|5 Chain 5, Crystal Structure Of Succinate-Semialdehyde Dehydrogenase
From Burkholderia Pseudomallei, Part 2 Of 2
pdb|3IFH|6 Chain 6, Crystal Structure Of Succinate-Semialdehyde Dehydrogenase
From Burkholderia Pseudomallei, Part 2 Of 2
Length = 484
Score = 222 bits (565), Expect = 4e-58, Method: Compositional matrix adjust.
Identities = 150/476 (31%), Positives = 233/476 (48%), Gaps = 60/476 (12%)
Query: 67 QLLINGQFVDSASGKTFPTLDPRTGDVITHVAE-GEAEDVNRAVSAARKAFDEGPWPRMT 125
Q I G++ + S TF DP TG+ + V + G AE +A W T
Sbjct: 14 QAYIGGEWQAADSDATFEVFDPATGESLGTVPKMGAAETARAIEAAQAAWAG---WRMKT 70
Query: 126 AYERSKIILRFADLLERHNDEIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADKIQ 185
A ER+ I+ R+ DL+ ++D++A + T + GKP + A+ E+ ++A ++
Sbjct: 71 AKERAAILRRWFDLVIANSDDLALILTTEQGKPLAE-AKGEIAYAASFIEWFAEEGKRVA 129
Query: 186 GLTAPA-DGPYHVQTLHEPIGVA------------------------------------- 207
G T P D + + EPIGV
Sbjct: 130 GDTLPTPDANKRIVVVKEPIGVCAAITPWNFPAAMIARKVGPALAAGCPIVVKPAESTPF 189
Query: 208 ----------------GVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLAAK 251
GVL++V G G + S+ V KL+FTGST G++++ +A
Sbjct: 190 SALAMAFLAERAGVPKGVLSVVIGDPKAIGTEITSNPIVRKLSFTGSTAVGRLLMAQSAP 249
Query: 252 SNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFV 311
+ +K +TLELGG +PFIV +DAD+D A E A + + N GQ C +R FVHE VYD F
Sbjct: 250 T-VKKLTLELGGNAPFIVFDDADLDAAVEGAIASKYRNNGQTCVCTNRFFVHERVYDAFA 308
Query: 312 EKANALAMKRVVGDPFKGGIQQGPQIDSEQFEKILKYIRSGVDGGAKLETGGERLGAKGY 371
+K A K VG + G GP I+ +K+ +I + GA L TGG+R
Sbjct: 309 DKLAAAVSKLKVGRGTESGATLGPLINEAAVKKVESHIADALAKGASLMTGGKRHALGHG 368
Query: 372 YIKPTVFTGVKDDMLIAKDEIFGPVQSILKYKDLDEVIQRSNASQYGLAAGVFTHNLDTA 431
+ +PTV TGVK DM +AK+E FGP+ + ++ +E+++ +N +++GLAA +++ ++
Sbjct: 369 FFEPTVLTGVKPDMDVAKEETFGPLAPLFRFASEEELVRLANDTEFGLAAYLYSRDIGRV 428
Query: 432 NTLMRALRVGSVWINCFDVFDAAIPFGGYKQSGQGREKGSYSLSNYLQVKAVVTAL 487
+ AL G V IN + + PFGG KQSG GRE Y + +Y+ +K + A+
Sbjct: 429 WRVAEALEYGMVGINTGLISNEVAPFGGVKQSGLGREGSHYGIDDYVVIKYLCVAV 484
>pdb|1WNB|A Chain A, Escherichia Coli Ydcw Gene Product Is A Medium-Chain
Aldehyde Dehydrogenase (Complexed With Nadh And Betaine
Aldehyde)
pdb|1WNB|B Chain B, Escherichia Coli Ydcw Gene Product Is A Medium-Chain
Aldehyde Dehydrogenase (Complexed With Nadh And Betaine
Aldehyde)
pdb|1WNB|C Chain C, Escherichia Coli Ydcw Gene Product Is A Medium-Chain
Aldehyde Dehydrogenase (Complexed With Nadh And Betaine
Aldehyde)
pdb|1WNB|D Chain D, Escherichia Coli Ydcw Gene Product Is A Medium-Chain
Aldehyde Dehydrogenase (Complexed With Nadh And Betaine
Aldehyde)
pdb|1WND|A Chain A, Escherichia Coli Ydcw Gene Product Is A Medium-Chain
Aldehyde Dehydrogenase As Determined By Kinetics And
Crystal Stucture
pdb|1WND|B Chain B, Escherichia Coli Ydcw Gene Product Is A Medium-Chain
Aldehyde Dehydrogenase As Determined By Kinetics And
Crystal Stucture
pdb|1WND|C Chain C, Escherichia Coli Ydcw Gene Product Is A Medium-Chain
Aldehyde Dehydrogenase As Determined By Kinetics And
Crystal Stucture
pdb|1WND|D Chain D, Escherichia Coli Ydcw Gene Product Is A Medium-Chain
Aldehyde Dehydrogenase As Determined By Kinetics And
Crystal Stucture
Length = 495
Score = 221 bits (563), Expect = 8e-58, Method: Compositional matrix adjust.
Identities = 150/473 (31%), Positives = 228/473 (48%), Gaps = 58/473 (12%)
Query: 67 QLLINGQFVDSASGKTFPTLDPRTGDVITHVAEGEAEDVNRAVSAARKAFDEGPWPRMTA 126
+LLING+ V S G+ P +P TGDV+ +AE AE V+ AV AA AF E W + T
Sbjct: 25 KLLINGELV-SGEGEKQPVYNPATGDVLLEIAEASAEQVDAAVRAADAAFAE--WGQTTP 81
Query: 127 YERSKIILRFADLLERHNDEIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADKIQG 186
R++ +L+ AD++E + A LE+ + GKP + E+P +FR++AG A + G
Sbjct: 82 KVRAECLLKLADVIEENGQVFAELESRNCGKPLHSAFNDEIPAIVDVFRFFAGAARCLNG 141
Query: 187 LTAPADGPYHVQTLH-EPIGV--------------------------------------- 206
L A H + +P+GV
Sbjct: 142 LAAGEYLEGHTSMIRRDPLGVVASIAPWNYPLMMAAWKLAPALAAGNCVVLKPSEITPLT 201
Query: 207 -------------AGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLAAKSN 253
AGV+NI+ G G T G L H +V ++ TGS TG+ ++ A S+
Sbjct: 202 ALKLAELAKDIFPAGVVNILFGRGKTVGDPLTGHPKVRMVSLTGSIATGEHIISHTA-SS 260
Query: 254 LKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFVEK 313
+K +ELGGK+P IV +DAD++ E ++N GQ C A R + + +YD VEK
Sbjct: 261 IKRTHMELGGKAPVIVFDDADIEAVVEGVRTFGYYNAGQDCTAACRIYAQKGIYDTLVEK 320
Query: 314 ANALAMKRVVGDPFKGGIQQGPQIDSEQFEKILKYIRSG-VDGGAKLETGGERLGAKGYY 372
A G P + GP E++ K + G K+ TGGE+ GYY
Sbjct: 321 LGAAVATLKSGAPDDESTELGPLSSLAHLERVGKAVEEAKATGHIKVITGGEKRKGNGYY 380
Query: 373 IKPTVFTGVKDDMLIAKDEIFGPVQSILKYKDLDEVIQRSNASQYGLAAGVFTHNLDTAN 432
PT+ G D I + E+FGPV S+ + + ++V+ +N SQYGLA+ V+T ++ A+
Sbjct: 381 YAPTLLAGALQDDAIVQKEVFGPVVSVTPFDNEEQVVNWANDSQYGLASSVWTKDVGRAH 440
Query: 433 TLMRALRVGSVWINCFDVFDAAIPFGGYKQSGQGREKGSYSLSNYLQVKAVVT 485
+ L+ G W+N + + +P GG K SG G++ Y L +Y V+ V+
Sbjct: 441 RVSARLQYGCTWVNTHFMLVSEMPHGGQKLSGYGKDMSLYGLEDYTVVRHVMV 493
>pdb|4DAL|A Chain A, Crystal Structure Of Putative Aldehyde Dehydrogenase From
Sinorhizobium Meliloti 1021
pdb|4DAL|B Chain B, Crystal Structure Of Putative Aldehyde Dehydrogenase From
Sinorhizobium Meliloti 1021
pdb|4DAL|C Chain C, Crystal Structure Of Putative Aldehyde Dehydrogenase From
Sinorhizobium Meliloti 1021
pdb|4DAL|D Chain D, Crystal Structure Of Putative Aldehyde Dehydrogenase From
Sinorhizobium Meliloti 1021
pdb|4DAL|E Chain E, Crystal Structure Of Putative Aldehyde Dehydrogenase From
Sinorhizobium Meliloti 1021
pdb|4DAL|F Chain F, Crystal Structure Of Putative Aldehyde Dehydrogenase From
Sinorhizobium Meliloti 1021
pdb|4DAL|G Chain G, Crystal Structure Of Putative Aldehyde Dehydrogenase From
Sinorhizobium Meliloti 1021
pdb|4DAL|H Chain H, Crystal Structure Of Putative Aldehyde Dehydrogenase From
Sinorhizobium Meliloti 1021
pdb|4F3X|A Chain A, Crystal Structure Of Putative Aldehyde Dehydrogenase From
Sinorhizobium Meliloti 1021 Complexed With Nad
pdb|4F3X|B Chain B, Crystal Structure Of Putative Aldehyde Dehydrogenase From
Sinorhizobium Meliloti 1021 Complexed With Nad
pdb|4F3X|C Chain C, Crystal Structure Of Putative Aldehyde Dehydrogenase From
Sinorhizobium Meliloti 1021 Complexed With Nad
pdb|4F3X|D Chain D, Crystal Structure Of Putative Aldehyde Dehydrogenase From
Sinorhizobium Meliloti 1021 Complexed With Nad
Length = 498
Score = 211 bits (536), Expect = 9e-55, Method: Compositional matrix adjust.
Identities = 146/477 (30%), Positives = 226/477 (47%), Gaps = 68/477 (14%)
Query: 66 TQLLINGQFVDSASGKTFPTLDPRTGDVITHVAEGEAEDVNRAVSAARKAFDEGPWPRMT 125
TQLLI +F ++ + L+PRTG I +AE ++ AV AA +AF W + T
Sbjct: 26 TQLLIGSRF-EAGTEAEEHILNPRTGAGIIDLAEASHAQIDAAVDAAERAFV--GWSQTT 82
Query: 126 AYERSKIILRFADLLERHNDEIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADKIQ 185
ERS +L+ AD +E+ DE AALE + GKP E+P +R++AG ++
Sbjct: 83 PAERSNALLKIADAIEKEADEFAALEALNCGKPINAVKNDELPAIIDCWRFFAG---AVR 139
Query: 186 GLTAPADGPY---HVQTLH-EPIGVAG--------------------------------- 208
L APA G Y H + +PIG+ G
Sbjct: 140 NLHAPAAGEYLPGHTSXIRRDPIGIVGSIAPWNYPLXXXAWKLAPAIGGGNTVVFKPSEQ 199
Query: 209 -------------------VLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLA 249
V+N+++G G T G AL +H +V ++ TG TGK VL A
Sbjct: 200 TPLTALKLARLIADILPEGVVNVITGRGETVGNALINHPKVGXVSITGDIATGKKVLAAA 259
Query: 250 AKSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQ 309
AK+ +K LELGGK+P IV DAD++ ++N GQ C A R + +Y++
Sbjct: 260 AKT-VKRTHLELGGKAPVIVYGDADLEAVVNGIRTFGYYNAGQDCTAACRIYAEAGIYEK 318
Query: 310 FV-EKANALAMKRV-VGDPFKGGIQQGPQIDSEQFEKILKYIRSGVD-GGAKLETGGERL 366
V + +A++ R + D + I GP I Q +++ ++ D ++ TGG
Sbjct: 319 LVADLTSAVSTIRYNLDDDTENEI--GPLISRRQRDRVASFVERAADQKHIEITTGGRTG 376
Query: 367 GAKGYYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYKDLDEVIQRSNASQYGLAAGVFTH 426
+G++ +PTV G + I + E+FGPV S+ ++ D+ + +N S YGLA+ V+T
Sbjct: 377 SDEGFFFQPTVVAGATQEDEIVRREVFGPVVSVTRFTGKDDAVAWANDSDYGLASSVWTK 436
Query: 427 NLDTANTLMRALRVGSVWINCFDVFDAAIPFGGYKQSGQGREKGSYSLSNYLQVKAV 483
++ A L+ G WIN P GG KQSG G++ Y+L +Y V+ +
Sbjct: 437 DISKAXRAASRLQYGCTWINTHFXLTNEXPHGGIKQSGYGKDXSVYALEDYTAVRHI 493
>pdb|2HG2|A Chain A, Structure Of Lactaldehyde Dehydrogenase
Length = 479
Score = 208 bits (529), Expect = 6e-54, Method: Compositional matrix adjust.
Identities = 140/472 (29%), Positives = 226/472 (47%), Gaps = 61/472 (12%)
Query: 68 LLINGQFVDSASGKTFPTLDPRTGDVITHVAEGEAEDVNRAVSAARKAFDEGPWPRMTAY 127
+ I+GQFV ++P T VI+ + +G+AED +A+ AA +A E W + A
Sbjct: 9 MYIDGQFVTWRGDAWIDVVNPATEAVISRIPDGQAEDARKAIDAAERAQPE--WEALPAI 66
Query: 128 ERSKIILRFADLLERHNDEIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADKIQGL 187
ER+ + + + + EI+AL + GK +Q A+ EV T Y A WA + +G
Sbjct: 67 ERASWLRKISAGIRERASEISALIVEEGGK-IQQLAEVEVAFTADYIDYMAEWARRYEGE 125
Query: 188 TAPADGP-YHVQTLHEPIGV-AGVL----------------------------------- 210
+D P ++ +GV G+L
Sbjct: 126 IIQSDRPGENILLFKRALGVTTGILPWNFPFFLIARKMAPALLTGNTIVIKPSEFTPNNA 185
Query: 211 -----------------NIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLAAKSN 253
N+V G G T G LA + +V ++ TGS + G+ ++ AAK N
Sbjct: 186 IAFAKIVDEIGLPRGVFNLVLGRGETVGQELAGNPKVAMVSMTGSVSAGEKIMATAAK-N 244
Query: 254 LKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFVEK 313
+ V LELGGK+P IV +DAD++ A + + N GQ C R +V + +YDQFV +
Sbjct: 245 ITKVCLELGGKAPAIVMDDADLELAVKAIVDSRVINSGQVCNCAERVYVQKGIYDQFVNR 304
Query: 314 ANALAMKRVVGDPF-KGGIQQGPQIDSEQFEKILKYIRSGVDGGAKLETGGERLGAKGYY 372
G+P + I GP I++ E++ + + V+ GA++ GG+ + KGYY
Sbjct: 305 LGEAMQAVQFGNPAERNDIAMGPLINAAALERVEQKVARAVEEGARVAFGGKAVEGKGYY 364
Query: 373 IKPTVFTGVKDDMLIAKDEIFGPVQSILKYKDLDEVIQRSNASQYGLAAGVFTHNLDTAN 432
PT+ V+ +M I +E FGPV ++ + L++ I +N S YGL + ++T NL+ A
Sbjct: 365 YPPTLLLDVRQEMSIMHEETFGPVLPVVAFDTLEDAISMANDSDYGLTSSIYTQNLNVAM 424
Query: 433 TLMRALRVGSVWINCFDVFDAAIPF-GGYKQSGQGREKGSYSLSNYLQVKAV 483
++ L+ G +IN + F+A F G+++SG G G + L YLQ + V
Sbjct: 425 KAIKGLKFGETYINR-ENFEAMQGFHAGWRKSGIGGADGKHGLHEYLQTQVV 475
>pdb|3B4W|A Chain A, Crystal Structure Of Mycobacterium Tuberculosis Aldehyde
Dehydrogenase Complexed With Nad+
Length = 495
Score = 204 bits (520), Expect = 8e-53, Method: Compositional matrix adjust.
Identities = 153/480 (31%), Positives = 221/480 (46%), Gaps = 60/480 (12%)
Query: 64 DYTQLLINGQFVDSASGKTFPTLDPRTGDVITHVAEGEAEDVNRAVSAARKAFDEGPWPR 123
+Y +L I G++ ++ P TG+ + V A DV+ AV+AAR AFD GPWP
Sbjct: 7 EYDKLFIGGKWTKPSTSDVIEVRCPATGEYVGKVPMAAAADVDAAVAAARAAFDNGPWPS 66
Query: 124 MTAYERSKIILRFADLLERHNDEIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADK 183
+ER+ +I +L D L + G+P + Y+AG ADK
Sbjct: 67 TPPHERAAVIAAAVKMLAERKDLFTKLLAAETGQPPTIIETMHWMGSMGAMNYFAGAADK 126
Query: 184 IQGLTAPADGPYHVQTL-HEPIGVAG---------------------------------- 208
+ T G Y + EP+GV G
Sbjct: 127 VT-WTETRTGSYGQSIVSREPVGVVGAIVAWNVPLFLAVNKIAPALLAGCTIVLKPAAET 185
Query: 209 -------------------VLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLA 249
VL++V G G G AL S+ ++D FTGS+ G+ V + A
Sbjct: 186 PLTANALAEVFAEVGLPEGVLSVVPG-GIETGQALTSNPDIDMFTFTGSSAVGREVGRRA 244
Query: 250 AKSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQ 309
A+ LKP TLELGGKS I+ ED D+ A + ++ N GQ C +R S YD+
Sbjct: 245 AEM-LKPCTLELGGKSAAIILEDVDLAAAIPMMVFSGVMNAGQGCVNQTRILAPRSRYDE 303
Query: 310 FVEKANALAMKRVVGDPFKGGIQQGPQIDSEQFEKILKYIRSGVDGGAKLETGGERLGA- 368
V VG P Q GP I +Q ++ YI G++ GA+L GG R
Sbjct: 304 IVAAVTNFVTALPVGPPSDPAAQIGPLISEKQRTRVEGYIAKGIEEGARLVCGGGRPEGL 363
Query: 369 -KGYYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYKDLDEVIQRSNASQYGLAAGVFTHN 427
G++I+PTVF V + M IA++EIFGPV +I+ Y ++ I +N S YGLA V+T +
Sbjct: 364 DNGFFIQPTVFADVDNKMTIAQEEIFGPVLAIIPYDTEEDAIAIANDSVYGLAGSVWTTD 423
Query: 428 LDTANTLMRALRVGSVWINCFDVFDAAIPFGGYKQSGQGREKGSYSLSNYLQVKAVVTAL 487
+ + + +R G+ IN + FD PFGGYK SG GRE G + ++ Q K+V+ +
Sbjct: 424 VPKGIKISQQIRTGTYGINWY-AFDPGSPFGGYKNSGIGRENGPEGVEHFTQQKSVLLPM 482
>pdb|3I44|A Chain A, Crystal Structure Of Aldehyde Dehydrogenase From
Bartonella Henselae At 2.0a Resolution
Length = 497
Score = 203 bits (516), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 138/481 (28%), Positives = 233/481 (48%), Gaps = 61/481 (12%)
Query: 59 PPVKVDYTQLLINGQFVDSASGKTFPTLDPRTGDVITHVAEGEAEDVNRAVSAARKAFDE 118
P ++ + ING + D ++ +DP T + ++ G D ++A++AA+KAF
Sbjct: 19 PGSMLNKRKFYINGLWDDPSTPHDLYVIDPSTEEACAVISLGSTRDADKAINAAKKAFQT 78
Query: 119 GPWPRMTAYERSKIILRFADLLERHNDEIAALETWDNGKPFEQSAQTEVPMTTRLFRYYA 178
W + +ER + + ++ E+ + ++A + + G P + + + + R +
Sbjct: 79 --WKTTSPHERLGFVEKILEIYEKRSSDMAKTISMEMGAPIDMALNAQTATGSSHIRNFI 136
Query: 179 GW----------------------ADKIQGLTAPADGPYHVQTLH-------------EP 203
A + GL P + P + TL +P
Sbjct: 137 KAYKEFSFQEALIEGNEQAILHYDAIGVVGLITPWNWPMNQVTLKVIPALLAGCTMVLKP 196
Query: 204 IGVA------------------GVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIV 245
+A GV N+++G G G+ L++H +++ ++FTGST GK +
Sbjct: 197 SEIAPLSAMLFAEILDEAALPSGVFNLINGDGANVGSYLSAHPDLEMISFTGSTRAGKDI 256
Query: 246 LQLAAKSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHES 305
+ A+ + LK V LELGGK I+ DAD+D A + F+N GQ C A +R V ++
Sbjct: 257 SKNASNT-LKRVCLELGGKGANIIFADADID-ALQRGVRHCFYNSGQSCNAPTRMLVEQA 314
Query: 306 VYDQFVEKANALAMKRVVGDPFKGGIQQGPQIDSEQFEKILKYIRSGVDGGAKLETGGER 365
+YD+ ++ A +A K VG + G GP + EQ++KI I+SG+D GA L TGG
Sbjct: 315 IYDKAIKTAKDIAEKTQVGPGHQTGNHIGPVVSKEQYDKIQDLIQSGIDEGATLVTGGTG 374
Query: 366 LGA---KGYYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYKDLDEVIQRSNASQYGLAAG 422
L +GYY++PTVF VK M I ++EIFGPV S+L + DE + +N ++YGL
Sbjct: 375 LPMGMERGYYVRPTVFADVKPHMRIFREEIFGPVLSLLPFNTEDEAVTLANDTEYGLTNY 434
Query: 423 VFTHNLDTANTLMRALRVGSVWINCFDVFDAAIPFGGYKQSGQGREKGSYSLSNYLQVKA 482
+ + + + +R G V +N ++ + FGG K SG+ RE G + + +L KA
Sbjct: 435 IQSQDRSKCRRIAAQVRSGMVEVNGHELPGGSY-FGGVKFSGRAREGGLWGIKEFLDTKA 493
Query: 483 V 483
+
Sbjct: 494 I 494
>pdb|2OPX|A Chain A, Crystal Structure Of Lactaldehyde Dehydrogenase From
Escherichia Coli
Length = 479
Score = 197 bits (501), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 139/472 (29%), Positives = 224/472 (47%), Gaps = 61/472 (12%)
Query: 68 LLINGQFVDSASGKTFPTLDPRTGDVITHVAEGEAEDVNRAVSAARKAFDEGPWPRMTAY 127
+ I+GQFV ++P T VI+ + +G+AED +A+ AA +A E W + A
Sbjct: 9 MYIDGQFVTWRGDAWIDVVNPATEAVISRIPDGQAEDARKAIDAAERAQPE--WEALPAI 66
Query: 128 ERSKIILRFADLLERHNDEIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADKIQGL 187
ER+ + + + + EI+AL + GK +Q A+ EV T Y A WA + +G
Sbjct: 67 ERASWLRKISAGIRERATEISALIVEEGGK-IQQLAEVEVAFTADYIDYMAEWARRYEGE 125
Query: 188 TAPADGP-YHVQTLHEPIGV-AGVL---------------------NIV---SGYGPTAG 221
+D P ++ +GV G+L IV S + P
Sbjct: 126 IIQSDRPGENILLFKRALGVTTGILPWNFPFFLIARKMAPALLTGNTIVIKPSEFTPNNA 185
Query: 222 AALASHME----------------------------VDKLAFTGSTTTGKIVLQLAAKSN 253
A A ++ V ++ TGS + G+ ++ AAK N
Sbjct: 186 IAFAKIVDEIGLPRGVFNLVLGRGETVGQELAGNPKVAMVSMTGSVSAGEKIMATAAK-N 244
Query: 254 LKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFVEK 313
+ V LELGGK+P IV +DAD++ A + + N GQ C R +V + +YDQFV +
Sbjct: 245 ITKVCLELGGKAPAIVMDDADLELAVKAIVDSRVINSGQVCNCAERVYVQKGIYDQFVNR 304
Query: 314 ANALAMKRVVGDPF-KGGIQQGPQIDSEQFEKILKYIRSGVDGGAKLETGGERLGAKGYY 372
G+P + I GP I++ E++ + + V+ GA++ GG+ + KGYY
Sbjct: 305 LGEAMQAVQFGNPAERNDIAMGPLINAAALERVEQKVARAVEEGARVALGGKAVEGKGYY 364
Query: 373 IKPTVFTGVKDDMLIAKDEIFGPVQSILKYKDLDEVIQRSNASQYGLAAGVFTHNLDTAN 432
PT+ V+ +M I +E FGPV ++ + L+E I +N S YGL + ++T NL+ A
Sbjct: 365 YPPTLLLDVRQEMSIMHEETFGPVLPVVAFDTLEEAISMANDSDYGLTSSIYTQNLNVAM 424
Query: 433 TLMRALRVGSVWINCFDVFDAAIPF-GGYKQSGQGREKGSYSLSNYLQVKAV 483
++ L+ G +IN + F+A F G+++SG G G + L YLQ + V
Sbjct: 425 KAIKGLKFGETYINR-ENFEAMQGFHAGWRKSGIGGADGKHGLHEYLQTQVV 475
>pdb|2IMP|A Chain A, Crystal Structure Of Lactaldehyde Dehydrogenase From E.
Coli: The Ternary Complex With Product Bound (L)-Lactate
And Nadh.
pdb|2ILU|A Chain A, Crystal Structure Of Lactaldehyde Dehydrogenase From E.
Coli: The Binary Complex With Nadph
Length = 479
Score = 196 bits (498), Expect = 3e-50, Method: Compositional matrix adjust.
Identities = 138/472 (29%), Positives = 224/472 (47%), Gaps = 61/472 (12%)
Query: 68 LLINGQFVDSASGKTFPTLDPRTGDVITHVAEGEAEDVNRAVSAARKAFDEGPWPRMTAY 127
+ I+GQFV ++P T VI+ + +G+AED +A+ AA +A E W + A
Sbjct: 9 MYIDGQFVTWRGDAWIDVVNPATEAVISRIPDGQAEDARKAIDAAERAQPE--WEALPAI 66
Query: 128 ERSKIILRFADLLERHNDEIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADKIQGL 187
ER+ + + + + EI+AL + GK +Q A+ EV T Y A WA + +G
Sbjct: 67 ERASWLRKISAGIRERASEISALIVEEGGK-IQQLAEVEVAFTADYIDYMAEWARRYEGE 125
Query: 188 TAPADGP-YHVQTLHEPIGV-AGVL---------------------NIV---SGYGPTAG 221
+D P ++ +GV G+L IV S + P
Sbjct: 126 IIQSDRPGENILLFKRALGVTTGILPWNFPFFLIARKMAPALLTGNTIVIKPSEFTPNNA 185
Query: 222 AALASHME----------------------------VDKLAFTGSTTTGKIVLQLAAKSN 253
A A ++ V ++ TGS + G+ ++ AAK N
Sbjct: 186 IAFAKIVDEIGLPRGVFNLVLGRGETVGQELAGNPKVAMVSMTGSVSAGEKIMATAAK-N 244
Query: 254 LKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFVEK 313
+ V LELGGK+P IV +DAD++ A + + N GQ C R +V + +YDQFV +
Sbjct: 245 ITKVXLELGGKAPAIVMDDADLELAVKAIVDSRVINSGQVCNCAERVYVQKGIYDQFVNR 304
Query: 314 ANALAMKRVVGDPF-KGGIQQGPQIDSEQFEKILKYIRSGVDGGAKLETGGERLGAKGYY 372
G+P + I GP I++ E++ + + V+ GA++ GG+ + KGYY
Sbjct: 305 LGEAMQAVQFGNPAERNDIAMGPLINAAALERVEQKVARAVEEGARVAFGGKAVEGKGYY 364
Query: 373 IKPTVFTGVKDDMLIAKDEIFGPVQSILKYKDLDEVIQRSNASQYGLAAGVFTHNLDTAN 432
PT+ V+ +M I +E FGPV ++ + L++ I +N S YGL + ++T NL+ A
Sbjct: 365 YPPTLLLDVRQEMSIMHEETFGPVLPVVAFDTLEDAISMANDSDYGLTSSIYTQNLNVAM 424
Query: 433 TLMRALRVGSVWINCFDVFDAAIPF-GGYKQSGQGREKGSYSLSNYLQVKAV 483
++ L+ G +IN + F+A F G+++SG G G + L YLQ + V
Sbjct: 425 KAIKGLKFGETYINR-ENFEAMQGFHAGWRKSGIGGADGKHGLHEYLQTQVV 475
>pdb|3K2W|A Chain A, Crystal Structure Of Betaine-Aldehyde Dehydrogenase From
Pseudoalteromonas Atlantica T6c
pdb|3K2W|B Chain B, Crystal Structure Of Betaine-Aldehyde Dehydrogenase From
Pseudoalteromonas Atlantica T6c
pdb|3K2W|C Chain C, Crystal Structure Of Betaine-Aldehyde Dehydrogenase From
Pseudoalteromonas Atlantica T6c
pdb|3K2W|D Chain D, Crystal Structure Of Betaine-Aldehyde Dehydrogenase From
Pseudoalteromonas Atlantica T6c
pdb|3K2W|E Chain E, Crystal Structure Of Betaine-Aldehyde Dehydrogenase From
Pseudoalteromonas Atlantica T6c
pdb|3K2W|F Chain F, Crystal Structure Of Betaine-Aldehyde Dehydrogenase From
Pseudoalteromonas Atlantica T6c
pdb|3K2W|G Chain G, Crystal Structure Of Betaine-Aldehyde Dehydrogenase From
Pseudoalteromonas Atlantica T6c
pdb|3K2W|H Chain H, Crystal Structure Of Betaine-Aldehyde Dehydrogenase From
Pseudoalteromonas Atlantica T6c
Length = 497
Score = 192 bits (489), Expect = 3e-49, Method: Compositional matrix adjust.
Identities = 142/473 (30%), Positives = 209/473 (44%), Gaps = 62/473 (13%)
Query: 69 LINGQFVDSASGKTFPTLDPRTGDVITHVAEGEAEDVNRAVSAARKAFDEGPWPRMTAYE 128
I GQ+V S T L P TG VI + G D A+ A+ A ++TA
Sbjct: 16 FIGGQYVPSNESDTIDILSPSTGKVIGEIPAGCKADAENALEVAQAAQKAWA--KLTART 73
Query: 129 RSKIILRFADLLERHNDEIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADKIQGLT 188
R ++ FA+ + + +A + + GK A+ EV +T Y A I+G
Sbjct: 74 RQNMLRTFANKIRENKHILAPMLVAEQGKLL-SVAEMEVDVTATFIDYGCDNALTIEGDI 132
Query: 189 APADGPYHVQTLHE--------------PIGVAG-------------------------- 208
P+D +H+ P+ +AG
Sbjct: 133 LPSDNQDEKIYIHKVPRGVVVGITAWNFPLALAGRKIGPALITGNTMVLKPTQETPLATT 192
Query: 209 --------------VLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLAAKSNL 254
VLN+++G G G L + TGST GK + + +A+ +
Sbjct: 193 ELGRIAKEAGLPDGVLNVINGTGSVVGQTLCESPITKMITMTGSTVAGKQIYKTSAEY-M 251
Query: 255 KPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFVEKA 314
PV LELGGK+P +V +DAD+DKAAE A + F N GQ C R +VH SVYD+F+ K
Sbjct: 252 TPVMLELGGKAPMVVMDDADLDKAAEDALWGRFANCGQVCTCVERLYVHASVYDEFMAKF 311
Query: 315 NALAMKRVVGDPFKGGIQQGPQIDSEQFEKILKYIRSGVDGGAKLETGGERLGAKGY--- 371
L VGDP Q GP+ + + + I + + GA + TGG+ +G+
Sbjct: 312 LPLVKGLKVGDPMDADSQMGPKCNQREIDNIDHIVHEAIKQGATVATGGKTATVEGFEGG 371
Query: 372 -YIKPTVFTGVKDDMLIAKDEIFGPVQSILKYKDLDEVIQRSNASQYGLAAGVFTHNLDT 430
+ +PTV VK D ++ +E FGP+ I+K +++ I+ N S YGL+A V T +
Sbjct: 372 CWYEPTVLVDVKQDNIVVHEETFGPILPIVKVSSMEQAIEFCNDSIYGLSAYVHTQSFAN 431
Query: 431 ANTLMRALRVGSVWINCFDVFDAAIPFGGYKQSGQGREKGSYSLSNYLQVKAV 483
N + L VG V+IN G+KQSG G E G + L YL+ K V
Sbjct: 432 INQAISDLEVGEVYINRGMGEQHQGFHNGWKQSGFGGEDGKFGLEQYLEKKTV 484
>pdb|2W8N|A Chain A, The Crytal Structure Of The Oxidized Form Of Human Ssadh
pdb|2W8O|A Chain A, The Crystal Structure Of The Reduced Form Of Human Ssadh
Length = 487
Score = 187 bits (474), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 150/478 (31%), Positives = 235/478 (49%), Gaps = 68/478 (14%)
Query: 66 TQLLINGQFVDSASGKTFPTLDPRTGDVITHVAEGEAEDVNRAVSAARKAFDEGPWPRMT 125
T + G+++ +A+ TFP DP +G + VA+ + AV AA +AF W ++
Sbjct: 13 TDSFVGGRWLPAAA--TFPVQDPASGAALGMVADCGVREARAAVRAAYEAFCR--WREVS 68
Query: 126 AYERSKIILRFADLLERHNDEIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADKIQ 185
A ERS ++ ++ +L+ ++ D++A + T ++GKP ++ A E+ + +++ A ++
Sbjct: 69 AKERSSLLRKWYNLMIQNKDDLARIITAESGKPLKE-AHGEILYSAFFLEWFSEEARRVY 127
Query: 186 G--LTAPADGPYHVQTLHEPIGVA------------------------------------ 207
G + PA L +PIGVA
Sbjct: 128 GDIIHTPAK-DRRALVLKQPIGVAAVITPWNFPSAMITRKVGAALAAGCTVVVKPAEDTP 186
Query: 208 -----------------GVLNIVSGYGPTA---GAALASHMEVDKLAFTGSTTTGKIVLQ 247
GV N++ A G A+ + V K++FTGSTTTGKI+L
Sbjct: 187 FSALALAELASQAGIPSGVYNVIPCSRKNAKEVGEAICTDPLVSKISFTGSTTTGKILLH 246
Query: 248 LAAKSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVY 307
AA S +K V++ELGG +PFIV + A+VD+A A + F N GQ C ++ V ++
Sbjct: 247 HAANS-VKRVSMELGGLAPFIVFDSANVDQAVAGAMASKFRNTGQTCVCSNQFLVQRGIH 305
Query: 308 DQFVEKANALAMKR--VVGDPFKGGIQQGPQIDSEQFEKILKYIRSGVDGGAKLETGGER 365
D FV KA A AMK+ VG+ F+ G QGP I+ + EK+ K + V GA + TGG+R
Sbjct: 306 DAFV-KAFAEAMKKNLRVGNGFEEGTTQGPLINEKAVEKVEKQVNDAVSKGATVVTGGKR 364
Query: 366 LGAKGYYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYKDLDEVIQRSNASQYGLAAGVFT 425
+ +PT+ V DML +E FGP+ ++K+ +E I +NA+ GLA ++
Sbjct: 365 HQLGKNFFEPTLLCNVTQDMLCTHEETFGPLAPVIKFDTEEEAIAIANAADVGLAGYFYS 424
Query: 426 HNLDTANTLMRALRVGSVWINCFDVFDAAIPFGGYKQSGQGREKGSYSLSNYLQVKAV 483
+ + L VG V +N + PFGG KQSG GRE Y + YL++K V
Sbjct: 425 QDPAQIWRVAEQLEVGMVGVNEGLISSVECPFGGVKQSGLGREGSKYGIDEYLELKYV 482
>pdb|3RH9|A Chain A, The Crystal Structure Of Oxidoreductase From Marinobacter
Aquaeolei
pdb|3RH9|B Chain B, The Crystal Structure Of Oxidoreductase From Marinobacter
Aquaeolei
Length = 506
Score = 184 bits (466), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 149/471 (31%), Positives = 213/471 (45%), Gaps = 63/471 (13%)
Query: 70 INGQFVDSASGKTFPTLDPRTGDVITHVAEGEAEDVNRAVSAARKAFD-EGPWPRMTAYE 128
I G++ DSA G TF +P TG VI V EDV AV A + A PWP T
Sbjct: 16 IGGRWKDSAGGATFDVYNPATGSVIAKVPSXPEEDVVAAVEAGQSALRLTNPWPIET--- 72
Query: 129 RSKIILRFADLLERHNDEIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADKIQGLT 188
R K + D L+ + +EI + ++GKP+++ AQ EV F Y A + T
Sbjct: 73 RRKWLEDIRDGLKENREEIGRILCXEHGKPWKE-AQGEVDYAAGFFDYCAKHISALDSHT 131
Query: 189 APADGPYHVQTLH-EPIGVAGVL------------------------------------- 210
P T+H P+GV G++
Sbjct: 132 IPEKPKDCTWTVHYRPVGVTGLIVPWNFPIGXIAKKLSAALAAGCPSVIKPASETPLTXI 191
Query: 211 ----------------NIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLAAKSNL 254
N+V G G L H +V L+FTGST G+ ++ A+ +
Sbjct: 192 AFFSVXDKLDLPDGXVNLVXGKASVIGKVLCEHKDVPXLSFTGSTEVGRKLIVDTAE-QV 250
Query: 255 KPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFVEKA 314
K + LELGG +PFIV +DAD++ AA+ F GQ C +R FVHE V D F +K
Sbjct: 251 KKLALELGGNAPFIVFDDADLEAAADNLIANKFRGGGQTCVCANRIFVHEKVADAFGQKL 310
Query: 315 NALAMKRVVGDPFKGGIQQGPQIDSEQFEKILKYIRSGVDGGAKLETGGE--RLGAKGYY 372
K VGD GI GP I+ + F+K+ ++++ +D GA L G + LG G +
Sbjct: 311 AERVNKXTVGDGXNDGIDIGPLINKQGFDKVKRHLQDALDKGASLVAGKQPAELG-DGLF 369
Query: 373 IKPTVFTGVKDDMLIAKDEIFGPVQSILKYKDLDEVIQRSNASQYGLAAGVFTHNLDTAN 432
PTV GV + ++E FGP+ ++ +EVI N +++GLA+ VFT + + A
Sbjct: 370 FPPTVVQGVDREXCCYQEETFGPLVPXALFRTEEEVIDAGNDTEFGLASYVFTADAERAQ 429
Query: 433 TLMRALRVGSVWINCFDVFDAAIPFGGYKQSGQGREKGSYSLSNYLQVKAV 483
+ LR G V N PFGG K SG GRE G L +++ + V
Sbjct: 430 RVAAGLRFGHVGWNTGTGPTPEAPFGGXKASGIGREGGLEGLFEFVEAQTV 480
>pdb|2W8P|A Chain A, The Crystal Structure Of Human C340a Ssadh
pdb|2W8Q|A Chain A, The Crystal Structure Of Human Ssadh In Complex With Ssa.
pdb|2W8R|A Chain A, The Crystal Structure Of Human Ssadh In Complex With Nad+
Length = 487
Score = 183 bits (464), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 149/478 (31%), Positives = 234/478 (48%), Gaps = 68/478 (14%)
Query: 66 TQLLINGQFVDSASGKTFPTLDPRTGDVITHVAEGEAEDVNRAVSAARKAFDEGPWPRMT 125
T + G+++ +A+ TFP DP +G + VA+ + AV AA +AF W ++
Sbjct: 13 TDSFVGGRWLPAAA--TFPVQDPASGAALGMVADCGVREARAAVRAAYEAFCR--WREVS 68
Query: 126 AYERSKIILRFADLLERHNDEIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADKIQ 185
A ERS ++ ++ +L+ ++ D++A + T ++GKP ++ A E+ + +++ A ++
Sbjct: 69 AKERSSLLRKWYNLMIQNKDDLARIITAESGKPLKE-AHGEILYSAFFLEWFSEEARRVY 127
Query: 186 G--LTAPADGPYHVQTLHEPIGVA------------------------------------ 207
G + PA L +PIGVA
Sbjct: 128 GDIIHTPAK-DRRALVLKQPIGVAAVITPWNFPSAMITRKVGAALAAGCTVVVKPAEDTP 186
Query: 208 -----------------GVLNIVSGYGPTA---GAALASHMEVDKLAFTGSTTTGKIVLQ 247
GV N++ A G A+ + V K++FTGSTTTGKI+L
Sbjct: 187 FSALALAELASQAGIPSGVYNVIPCSRKNAKEVGEAICTDPLVSKISFTGSTTTGKILLH 246
Query: 248 LAAKSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVY 307
AA S +K V++ELGG +PFIV + A+VD+A A + F N GQ ++ V ++
Sbjct: 247 HAANS-VKRVSMELGGLAPFIVFDSANVDQAVAGAMASKFRNTGQTAVCSNQFLVQRGIH 305
Query: 308 DQFVEKANALAMKR--VVGDPFKGGIQQGPQIDSEQFEKILKYIRSGVDGGAKLETGGER 365
D FV KA A AMK+ VG+ F+ G QGP I+ + EK+ K + V GA + TGG+R
Sbjct: 306 DAFV-KAFAEAMKKNLRVGNGFEEGTTQGPLINEKAVEKVEKQVNDAVSKGATVVTGGKR 364
Query: 366 LGAKGYYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYKDLDEVIQRSNASQYGLAAGVFT 425
+ +PT+ V DML +E FGP+ ++K+ +E I +NA+ GLA ++
Sbjct: 365 HQLGKNFFEPTLLCNVTQDMLCTHEETFGPLAPVIKFDTEEEAIAIANAADVGLAGYFYS 424
Query: 426 HNLDTANTLMRALRVGSVWINCFDVFDAAIPFGGYKQSGQGREKGSYSLSNYLQVKAV 483
+ + L VG V +N + PFGG KQSG GRE Y + YL++K V
Sbjct: 425 QDPAQIWRVAEQLEVGMVGVNEGLISSVECPFGGVKQSGLGREGSKYGIDEYLELKYV 482
>pdb|3RJL|A Chain A, Crystal Structure Of 1-Pyrroline-5-Carboxylate
Dehydrogenase From Bacillus Licheniformis (Target
Nysgrc-000337)
pdb|3RJL|B Chain B, Crystal Structure Of 1-Pyrroline-5-Carboxylate
Dehydrogenase From Bacillus Licheniformis (Target
Nysgrc-000337)
pdb|3RJL|C Chain C, Crystal Structure Of 1-Pyrroline-5-Carboxylate
Dehydrogenase From Bacillus Licheniformis (Target
Nysgrc-000337)
pdb|3RJL|D Chain D, Crystal Structure Of 1-Pyrroline-5-Carboxylate
Dehydrogenase From Bacillus Licheniformis (Target
Nysgrc-000337)
pdb|3RJL|E Chain E, Crystal Structure Of 1-Pyrroline-5-Carboxylate
Dehydrogenase From Bacillus Licheniformis (Target
Nysgrc-000337)
pdb|3RJL|F Chain F, Crystal Structure Of 1-Pyrroline-5-Carboxylate
Dehydrogenase From Bacillus Licheniformis (Target
Nysgrc-000337)
pdb|3RJL|G Chain G, Crystal Structure Of 1-Pyrroline-5-Carboxylate
Dehydrogenase From Bacillus Licheniformis (Target
Nysgrc-000337)
pdb|3RJL|H Chain H, Crystal Structure Of 1-Pyrroline-5-Carboxylate
Dehydrogenase From Bacillus Licheniformis (Target
Nysgrc-000337)
Length = 538
Score = 182 bits (463), Expect = 3e-46, Method: Compositional matrix adjust.
Identities = 137/453 (30%), Positives = 206/453 (45%), Gaps = 64/453 (14%)
Query: 92 DVITHVAEGEAEDVNRAVSAARKAFDEGPWPRMTAYERSKIILRFADLLERHNDEIAALE 151
+V+ V++ + +A+ AA KAF+ W ER+ ++ R + R E +AL
Sbjct: 63 EVVGTVSKATQDHAEKAIQAAAKAFE--TWRYTDPEERAAVLFRAVAKVRRKKHEFSALL 120
Query: 152 TWDNGKPF-EQSAQTE-------------------VPMTTR------------------- 172
+ GKP+ E A T P+ +R
Sbjct: 121 VKEAGKPWNEADADTAEAIDFMEYYARQMIELAKGKPVNSREGERNQYVYTPTGVTVVIP 180
Query: 173 ----LFRYYAGW--ADKIQGLT--------APADGPYHVQTLHEPIGVAGVLNIVSGYGP 218
LF AG A + G T AP V+ L E GV+N V G G
Sbjct: 181 PWNFLFAIMAGTTVAPIVTGNTVVLKPASAAPVIAAKFVEVLEESGLPKGVVNFVPGSGA 240
Query: 219 TAGAALASHMEVDKLAFTGSTTTGKIVLQLAAK-----SNLKPVTLELGGKSPFIVCEDA 273
G L H + + FTGS G + + AAK ++LK V E+GGK +V ED
Sbjct: 241 EVGDYLVDHPKTSIITFTGSREVGTRIFERAAKVQPGQTHLKQVIAEMGGKDTVVVDEDC 300
Query: 274 DVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMKRVVGDPFKGGIQQ 333
D++ AA+ + F GQ C AGSR VHE VYD+ +++ + + VG+P +
Sbjct: 301 DIELAAQSIFTSAFGFAGQKCSAGSRAVVHEKVYDEVLKRVIEITESKKVGEPDSADVYM 360
Query: 334 GPQIDSEQFEKILKYIRSGVDGGAKLETGGERLGAKGYYIKPTVFTGVKDDMLIAKDEIF 393
GP ID F KI+ YI G + G +L +GG+ +KGY+I+PT+F + + ++EIF
Sbjct: 361 GPVIDQASFNKIMDYIEIGKEEG-RLVSGGKGDDSKGYFIEPTIFADLDPKARLMQEEIF 419
Query: 394 GPVQSILKYKDLDEVIQRSNASQYGLAAGVFTHNLDTANTLMRALRVGSVWI--NCFDVF 451
GPV + K DE ++ +N ++YGL V T N D N + VG+++ NC
Sbjct: 420 GPVVAFSKVSSFDEALEVANNTEYGLTGAVITKNRDHINRAKQEFHVGNLYFNRNCTGAI 479
Query: 452 DAAIPFGGYKQSGQGREKGSYS-LSNYLQVKAV 483
PFGG+K SG + G L+ ++Q K +
Sbjct: 480 VGYHPFGGFKMSGTDSKAGGPDYLALHMQAKTI 512
>pdb|3R64|A Chain A, Crystal Structure Of A Nad-Dependent Benzaldehyde
Dehydrogenase From Corynebacterium Glutamicum
pdb|3R64|B Chain B, Crystal Structure Of A Nad-Dependent Benzaldehyde
Dehydrogenase From Corynebacterium Glutamicum
pdb|3R64|C Chain C, Crystal Structure Of A Nad-Dependent Benzaldehyde
Dehydrogenase From Corynebacterium Glutamicum
pdb|3R64|D Chain D, Crystal Structure Of A Nad-Dependent Benzaldehyde
Dehydrogenase From Corynebacterium Glutamicum
Length = 508
Score = 179 bits (455), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 150/475 (31%), Positives = 220/475 (46%), Gaps = 69/475 (14%)
Query: 63 VDYTQLLINGQFVDSASGKTFPTLDPRTGDVITHVAEGEAEDVNRAVSAARKAFDEGPWP 122
+D T+ LI GQ+V+ S + ++P VI + DV+ A AA+KA E W
Sbjct: 10 IDATKHLIGGQWVEGNSDRISTNINPYDDSVIAESKQASIADVDAAYEAAKKAQAE--WA 67
Query: 123 RMTAYERSKIILRFADLLERHNDEI--------------AALETWDNGKPFEQSAQ---- 164
A ERS II R A+LLE H +EI A LE G ++SA
Sbjct: 68 ATPAAERSAIIYRAAELLEEHREEIVEWLIKESGSTRSKANLEITLAGNITKESASFPGR 127
Query: 165 -------TEVP-MTTRLFRYYAGWADKIQGLTAPADGPYHVQT----------------- 199
+ P R++R G + G+ +P + P ++
Sbjct: 128 VHGRISPSNTPGKENRVYRVAKG----VVGVISPWNFPLNLSIRSVAPALAVGNAVVIKP 183
Query: 200 --------------LHEPIGV-AGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKI 244
+ E GV AGV++ V+G G G +H ++FTGST G+
Sbjct: 184 ASDTPVTGGVIPARIFEEAGVPAGVISTVAGAGSEIGDHFVTHAVPKLISFTGSTPVGRR 243
Query: 245 VLQLAAKSN-LKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVH 303
V +LA +K V LELGG +PF+V DAD+D AA+ A F +QGQ C + +R V
Sbjct: 244 VGELAINGGPMKTVALELGGNAPFVVLADADIDAAAQAAAVGAFLHQGQICMSINRVIVD 303
Query: 304 ESVYDQFVEKANALAMKRVVGDPFKGGIQQGPQIDSEQFEKILKYIRSGVDGGAKLETGG 363
+V+D+F+EK GDP G GP I+ Q + + I GA ++ G
Sbjct: 304 AAVHDEFLEKFVEAVKNIPTGDPSAEGTLVGPVINDSQLSGLKEKIELAKKEGATVQVEG 363
Query: 364 ERLGAKGYYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYKDLDEVIQRSNASQYGLAAGV 423
+G + P VF+ V DM IA++EIFGP+ S+LK D + +NAS +GL+A V
Sbjct: 364 P---IEGRLVHPHVFSDVTSDMEIAREEIFGPLISVLKADDEAHAAELANASDFGLSAAV 420
Query: 424 FTHNLDTANTLMRALRVGSVWINCFDVFDAA-IPFGGYKQSGQGREKGSYSLSNY 477
++ ++D A + G V IN V D + FGG K SG GR G +++ +
Sbjct: 421 WSKDIDRAAQFALQIDSGMVHINDLTVNDEPHVMFGGSKNSGLGRFNGDWAIEEF 475
>pdb|3QAN|A Chain A, Crystal Structure Of 1-Pyrroline-5-Carboxylate
Dehydrogenase From Bacillus Halodurans
pdb|3QAN|B Chain B, Crystal Structure Of 1-Pyrroline-5-Carboxylate
Dehydrogenase From Bacillus Halodurans
pdb|3QAN|C Chain C, Crystal Structure Of 1-Pyrroline-5-Carboxylate
Dehydrogenase From Bacillus Halodurans
Length = 538
Score = 179 bits (454), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 111/304 (36%), Positives = 157/304 (51%), Gaps = 9/304 (2%)
Query: 188 TAPADGPYHVQTLHEPIGVAGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQ 247
T P V+ L + GV+N V G G G L H + + FTGS G + +
Sbjct: 210 TTPVVAAKFVEVLEDAGLPKGVINYVPGSGAEVGDYLVDHPKTSLITFTGSKDVGVRLYE 269
Query: 248 LAA-----KSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFV 302
AA +++LK V +E+GGK +V DAD+D AAE + F GQ C AGSR +
Sbjct: 270 RAAVVRPGQNHLKRVIVEMGGKDTVVVDRDADLDLAAESILVSAFGFSGQKCSAGSRAVI 329
Query: 303 HESVYDQFVEKANALAMKRVVGDPFKGGIQQGPQIDSEQFEKILKYIRSGVDGGAKLETG 362
H+ VYD+ +EK ALA VGDP GP ID + FEKI+ YI G G +L TG
Sbjct: 330 HKDVYDEVLEKTVALAKNLTVGDPTNRDNYMGPVIDEKAFEKIMSYIEIGKKEG-RLMTG 388
Query: 363 GERLGAKGYYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYKDLDEVIQRSNASQYGLAAG 422
GE + G++I+PT+ + + +I ++EIFGPV + K D D ++ +N ++YGL
Sbjct: 389 GEGDSSTGFFIQPTIIADLDPEAVIMQEEIFGPVVAFSKANDFDHALEIANNTEYGLTGA 448
Query: 423 VFTHNLDTANTLMRALRVGSVWI--NCFDVFDAAIPFGGYKQSGQGREKGSYS-LSNYLQ 479
V T N R VG+++ NC PFGG+K SG + G L+ ++Q
Sbjct: 449 VITRNRAHIEQAKREFHVGNLYFNRNCTGAIVGYHPFGGFKMSGTDSKAGGPDYLALHMQ 508
Query: 480 VKAV 483
K V
Sbjct: 509 AKTV 512
>pdb|4DNG|A Chain A, Crystal Structure Of Putative Aldehyde Dehydrogenase From
Bacillus Subtilis Subsp. Subtilis Str. 168
pdb|4DNG|B Chain B, Crystal Structure Of Putative Aldehyde Dehydrogenase From
Bacillus Subtilis Subsp. Subtilis Str. 168
Length = 485
Score = 162 bits (411), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 131/455 (28%), Positives = 201/455 (44%), Gaps = 62/455 (13%)
Query: 69 LINGQFVDSASGKTFPTLDPRTGDVITHVAEGEAEDVNRAVSAARKAFDEGPWPRMTAYE 128
ING++ SG+T L+P VIT + + + A A+KA E W + T +
Sbjct: 10 FINGKWTGGESGRTEDILNPYDQSVITTASLATGKQLEDAFDIAQKAQKE--WAKSTTED 67
Query: 129 RSKIILRFADLLERHNDEIAALETWDNGKPFEQSA----QT------------------E 166
R ++ + L + D+I + + G +S QT E
Sbjct: 68 RKAVLQKARGYLHENRDDIIMMIARETGGTIIKSTIELEQTIAILDEAMTYTGELGGVKE 127
Query: 167 VP-----MTTRLFRYYAGWADKIQGLTAPAD---------------------------GP 194
VP T +++R G I P + G
Sbjct: 128 VPSDIEGKTNKIYRLPLGVISSISPFNFPMNLSMRSIAPAIALGNSVVHKPDIQTAISGG 187
Query: 195 YHVQTLHEPIGV-AGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLAAKSN 253
+ E G+ AGVLN++ G + ++ ++FTGST G+ + ++A ++
Sbjct: 188 TIIAKAFEHAGLPAGVLNVMLTDVKEIGDGMLTNPIPRLISFTGSTAVGRHIGEIAGRA- 246
Query: 254 LKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFVEK 313
K + LELGG +PF V DADVD+A + A + F +QGQ C +R VH+ VYD+FVEK
Sbjct: 247 FKRMALELGGNNPFAVLSDADVDRAVDAAIFGKFIHQGQICMIINRIIVHQDVYDEFVEK 306
Query: 314 ANALAMKRVVGDPFKGGIQQGPQIDSEQFEKILKYIRSGVDGGAKLETGGERLGAKGYYI 373
A + GD GP I+ Q EK L+ I G +L G+R+ G +
Sbjct: 307 FTARVKQLPYGDQTDPKTVVGPLINERQIEKALEIIEQAKTDGIELAVEGKRV---GNVL 363
Query: 374 KPTVFTGVKDDMLIAKDEIFGPVQSILKYKDLDEVIQRSNASQYGLAAGVFTHNLDTANT 433
P VF G ++ IA+ E+F P+ +I+K E I +N ++YGL++ VFT +L+
Sbjct: 364 TPYVFVGADNNSKIAQTELFAPIATIIKAGSDQEAIDMANDTEYGLSSAVFTSDLEKGEK 423
Query: 434 LMRALRVGSVWINCFDVFDAA-IPFGGYKQSGQGR 467
+ G +N V D+ I FGG K SG GR
Sbjct: 424 FALQIDSGMTHVNDQSVNDSPNIAFGGNKASGVGR 458
>pdb|3PQA|A Chain A, Crystal Structure Of Glyceraldehyde-3-Phosphate
Dehydrogenase Gapn From Methanocaldococcus Jannaschii
Dsm 2661
pdb|3PQA|B Chain B, Crystal Structure Of Glyceraldehyde-3-Phosphate
Dehydrogenase Gapn From Methanocaldococcus Jannaschii
Dsm 2661
pdb|3PQA|C Chain C, Crystal Structure Of Glyceraldehyde-3-Phosphate
Dehydrogenase Gapn From Methanocaldococcus Jannaschii
Dsm 2661
pdb|3PQA|D Chain D, Crystal Structure Of Glyceraldehyde-3-Phosphate
Dehydrogenase Gapn From Methanocaldococcus Jannaschii
Dsm 2661
pdb|3RHD|A Chain A, Crystal Structure Of Glyceraldehyde-3-Phosphate
Dehydrogenase Gapn From Methanocaldococcus Jannaschii
Dsm 2661 Complexed With Nadp
pdb|3RHD|B Chain B, Crystal Structure Of Glyceraldehyde-3-Phosphate
Dehydrogenase Gapn From Methanocaldococcus Jannaschii
Dsm 2661 Complexed With Nadp
pdb|3RHD|C Chain C, Crystal Structure Of Glyceraldehyde-3-Phosphate
Dehydrogenase Gapn From Methanocaldococcus Jannaschii
Dsm 2661 Complexed With Nadp
pdb|3RHD|D Chain D, Crystal Structure Of Glyceraldehyde-3-Phosphate
Dehydrogenase Gapn From Methanocaldococcus Jannaschii
Dsm 2661 Complexed With Nadp
Length = 486
Score = 159 bits (403), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 123/476 (25%), Positives = 215/476 (45%), Gaps = 71/476 (14%)
Query: 68 LLINGQFVDSASGKTFPTLDPRTGDVITHVAEGEAEDVNRAVSAARKAFDEGPWPRMTAY 127
+ I+G++++ + ++P + +VI + E+ A+ A K + +
Sbjct: 2 MFIDGKWINR---EDMDVINPYSLEVIKKIPALSREEAKEAIDTAEKY--KEVMKNLPIT 56
Query: 128 ERSKIILRFADLLERHNDEIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADK---- 183
+R I++ A ++ +E+A + D GKP +Q A+ EV + F+ A + +
Sbjct: 57 KRYNILMNIAKQIKEKKEELAKILAIDAGKPIKQ-ARVEVERSIGTFKLAAFYVKEHRDE 115
Query: 184 -----------------IQGLTAPADGPYHVQ-------------TLHEPIGVA------ 207
I G P + P ++ +H P A
Sbjct: 116 VIPSDDRLIFTRREPVGIVGAITPFNFPLNLSAHKIAPAIATGNVIVHHPSSKAPLVCIE 175
Query: 208 ----------------GVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLAAK 251
GV N+++G G G + + +V+ ++FTGS+ G+++ + K
Sbjct: 176 LAKIIENALKKYNVPLGVYNLLTGAGEVVGDEIVVNEKVNMISFTGSSKVGELITK---K 232
Query: 252 SNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFV 311
+ K + LELGG +P IV +DAD++KA F GQ C + V ES+ D+F+
Sbjct: 233 AGFKKIALELGGVNPNIVLKDADLNKAVNALIKGSFIYAGQVCISVGMILVDESIADKFI 292
Query: 312 EKANALAMKRVVGDPFKGGIQQGPQIDSEQFEKILKYIRSGVDGGAKLETGGERLGAKGY 371
E A VG+P GP I E E + K + +D G KL GG+R A Y
Sbjct: 293 EMFVNKAKVLNVGNPLDEKTDVGPLISVEHAEWVEKVVEKAIDEGGKLLLGGKRDKALFY 352
Query: 372 YIKPTVFTGVKDDMLIAKDEIFGPVQSILKYKDLDEVIQRSNASQYGLAAGVFTHNLDTA 431
PT+ +D++L K E F PV I++ + +E+I +N+++YGL + +FT++++ +
Sbjct: 353 ---PTILEVDRDNIL-CKTETFAPVIPIIRTNE-EEMIDIANSTEYGLHSAIFTNDINKS 407
Query: 432 NTLMRALRVGSVWINCFDVF-DAAIPFGGYKQSGQGREKGSYSLSNYLQVKAVVTA 486
L G V IN +F +PFGG K+SG GRE Y++ +K ++ +
Sbjct: 408 LKFAENLEFGGVVINDSSLFRQDNMPFGGVKKSGLGREGVKYAMEEMSNIKTIIIS 463
>pdb|1UZB|A Chain A, 1-pyrroline-5-carboxylate Dehydrogenase
pdb|1UZB|B Chain B, 1-pyrroline-5-carboxylate Dehydrogenase
pdb|2EIW|A Chain A, Crystal Analysis Of Delta1-Pyrroline-5-Carboxylate
Dehydrogenase From Thermus Thermophilus With Bound
L-Proline
pdb|2EIW|B Chain B, Crystal Analysis Of Delta1-Pyrroline-5-Carboxylate
Dehydrogenase From Thermus Thermophilus With Bound
L-Proline
Length = 516
Score = 158 bits (400), Expect = 5e-39, Method: Compositional matrix adjust.
Identities = 103/294 (35%), Positives = 152/294 (51%), Gaps = 10/294 (3%)
Query: 198 QTLHEPIGVAGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLAAK-----S 252
+ HE GV+N + G G GA L H + + FTGS G + + A + +
Sbjct: 221 EIFHEAGFPPGVVNFLPGVGEEVGAYLVEHPRIRFINFTGSLEVGLKIYEAAGRLAPGQT 280
Query: 253 NLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFVE 312
K +E GGK+ IV E AD D AAE + + QGQ C A SR + + Y+ +E
Sbjct: 281 WFKRAYVETGGKNAIIVDETADFDLAAEGVVVSAYGFQGQKCSAASRLILTQGAYEPVLE 340
Query: 313 KANALAMKRVVGDPFKGGIQQGPQIDSEQFEKILKYIRSGVDGGAKLETGGERLGAKGYY 372
+ A + VG P + GP + +EQ K+L YI G + G +L GG+RL +GY+
Sbjct: 341 RVLKRAERLSVG-PAEENPDLGPVVSAEQERKVLSYIEIGKNEG-QLVLGGKRLEGEGYF 398
Query: 373 IKPTVFTGVKDDMLIAKDEIFGPVQSILKYKDLDEVIQRSNASQYGLAAGVFTHNLDTAN 432
I PTVFT V IA++EIFGPV S+++ KD E ++ +N + YGL GV++ +
Sbjct: 399 IAPTVFTEVPPKARIAQEEIFGPVLSVIRVKDFAEALEVANDTPYGLTGGVYSRKREHLE 458
Query: 433 TLMRALRVGSVWIN--CFDVFDAAIPFGGYKQSGQGREKGSYS-LSNYLQVKAV 483
R VG+++ N PFGG+K SG + G+ L +L++KAV
Sbjct: 459 WARREFHVGNLYFNRKITGALVGVQPFGGFKLSGTNAKTGALDYLRLFLEMKAV 512
>pdb|2BHP|A Chain A, Crystal Analysis Of 1-Pyrroline-5-Carboxylate
Dehydrogenase From Thermus With Bound Nad.
pdb|2BHP|B Chain B, Crystal Analysis Of 1-Pyrroline-5-Carboxylate
Dehydrogenase From Thermus With Bound Nad.
pdb|2BJK|A Chain A, Crystal Analysis Of 1-Pyrroline-5-Carboxylate
Dehydrogenase From Thermus With Bound Nad And Citrate.
pdb|2BJK|B Chain B, Crystal Analysis Of 1-Pyrroline-5-Carboxylate
Dehydrogenase From Thermus With Bound Nad And Citrate.
pdb|2IY6|A Chain A, 1-Pyrroline-5-Carboxylate Dehydrogenase From Thermus With
Bound Citrate
pdb|2IY6|B Chain B, 1-Pyrroline-5-Carboxylate Dehydrogenase From Thermus With
Bound Citrate
pdb|2EHQ|A Chain A, Crystal Analysis Of 1-Pyrroline-5-Carboxylate
Dehydrogenase From Thermus With Bound Nadp
pdb|2EHQ|B Chain B, Crystal Analysis Of 1-Pyrroline-5-Carboxylate
Dehydrogenase From Thermus With Bound Nadp
pdb|2EJ6|A Chain A, Crystal Analysis Of Delta1-Pyrroline-5-Carboxylate
Dehydrogenase From Thermus Thermophilus With Bound
D-Proline
pdb|2EJ6|B Chain B, Crystal Analysis Of Delta1-Pyrroline-5-Carboxylate
Dehydrogenase From Thermus Thermophilus With Bound
D-Proline
pdb|2BHQ|A Chain A, Crystal Analysis Of 1-Pyrroline-5-Carboxylate
Dehydrogenase From Thermus With Bound Product Glutamate.
pdb|2BHQ|B Chain B, Crystal Analysis Of 1-Pyrroline-5-Carboxylate
Dehydrogenase From Thermus With Bound Product Glutamate.
pdb|2J5N|A Chain A, 1-Pyrroline-5-Carboxylate Dehydrogenase From Thermus
Thermophirus With Bound Inhibitor Glycine And Nad.
pdb|2J5N|B Chain B, 1-Pyrroline-5-Carboxylate Dehydrogenase From Thermus
Thermophirus With Bound Inhibitor Glycine And Nad.
pdb|2EIT|A Chain A, Crystal Analysis Of Delta1-Pyrroline-5-Carboxylate
Dehydrogenase From Thermus Thermophilus With Bound
L-Alanine And Nad
pdb|2EIT|B Chain B, Crystal Analysis Of Delta1-Pyrroline-5-Carboxylate
Dehydrogenase From Thermus Thermophilus With Bound
L-Alanine And Nad
pdb|2EHU|A Chain A, Crystal Analysis Of 1-Pyrroline-5-Carboxylate
Dehydrogenase From Thermus With Bound Nad And Inhibitor
L-Serine
pdb|2EHU|B Chain B, Crystal Analysis Of 1-Pyrroline-5-Carboxylate
Dehydrogenase From Thermus With Bound Nad And Inhibitor
L-Serine
pdb|2EII|A Chain A, Crystal Analysis Of Delta1-Pyrroline-5-Carboxylate
Dehydrogenase From Thermus Thermophilus With Bound
L-Valine And Nad.
pdb|2EII|B Chain B, Crystal Analysis Of Delta1-Pyrroline-5-Carboxylate
Dehydrogenase From Thermus Thermophilus With Bound
L-Valine And Nad
Length = 516
Score = 158 bits (399), Expect = 8e-39, Method: Compositional matrix adjust.
Identities = 103/294 (35%), Positives = 151/294 (51%), Gaps = 10/294 (3%)
Query: 198 QTLHEPIGVAGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLAAK-----S 252
+ HE GV+N + G G GA L H + + FTGS G + + A + +
Sbjct: 221 EIFHEAGFPPGVVNFLPGVGEEVGAYLVEHPRIRFINFTGSLEVGLKIYEAAGRLAPGQT 280
Query: 253 NLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFVE 312
K +E GGK IV E AD D AAE + + QGQ C A SR + + Y+ +E
Sbjct: 281 WFKRAYVETGGKDAIIVDETADFDLAAEGVVVSAYGFQGQKCSAASRLILTQGAYEPVLE 340
Query: 313 KANALAMKRVVGDPFKGGIQQGPQIDSEQFEKILKYIRSGVDGGAKLETGGERLGAKGYY 372
+ A + VG P + GP + +EQ K+L YI G + G +L GG+RL +GY+
Sbjct: 341 RVLKRAERLSVG-PAEENPDLGPVVSAEQERKVLSYIEIGKNEG-QLVLGGKRLEGEGYF 398
Query: 373 IKPTVFTGVKDDMLIAKDEIFGPVQSILKYKDLDEVIQRSNASQYGLAAGVFTHNLDTAN 432
I PTVFT V IA++EIFGPV S+++ KD E ++ +N + YGL GV++ +
Sbjct: 399 IAPTVFTEVPPKARIAQEEIFGPVLSVIRVKDFAEALEVANDTPYGLTGGVYSRKREHLE 458
Query: 433 TLMRALRVGSVWIN--CFDVFDAAIPFGGYKQSGQGREKGSYS-LSNYLQVKAV 483
R VG+++ N PFGG+K SG + G+ L +L++KAV
Sbjct: 459 WARREFHVGNLYFNRKITGALVGVQPFGGFKLSGTNAKTGALDYLRLFLEMKAV 512
>pdb|1T90|A Chain A, Crystal Structure Of Methylmalonate Semialdehyde
Dehydrogenase From Bacillus Subtilis
pdb|1T90|B Chain B, Crystal Structure Of Methylmalonate Semialdehyde
Dehydrogenase From Bacillus Subtilis
pdb|1T90|C Chain C, Crystal Structure Of Methylmalonate Semialdehyde
Dehydrogenase From Bacillus Subtilis
pdb|1T90|D Chain D, Crystal Structure Of Methylmalonate Semialdehyde
Dehydrogenase From Bacillus Subtilis
Length = 486
Score = 157 bits (396), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 131/478 (27%), Positives = 208/478 (43%), Gaps = 70/478 (14%)
Query: 70 INGQFVDSASGKTFPTLDPRTGDVITHVAEGEAEDVNRAVSAARKAFDEGPWPRMTAYER 129
ING++V+S + + ++P T +V+ V ED++ A A +AF W ++ R
Sbjct: 10 INGEWVESKTDQYEDVVNPATKEVLCQVPISTKEDIDYAAQTAAEAFKT--WSKVAVPRR 67
Query: 130 SKIILRFADLLERHNDEIAALETWDNGKPFEQS--------------------------A 163
++I+ F LL +H +E+A L T +NGK +++ A
Sbjct: 68 ARILFNFQQLLSQHKEELAHLITIENGKNTKEALGEVGRGIENVEFAAGAPSLMMGDSLA 127
Query: 164 QTEVPMTTRLFRYYAGWADKIQGLTAPADGPYHVQTLHEPIGVA---------------- 207
+ +RY G + G AP + P V P+ +A
Sbjct: 128 SIATDVEAANYRYPIG----VVGGIAPFNFPMMVPCWMFPMAIALGNTFILKPSERTPLL 183
Query: 208 ---------------GVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLAAKS 252
GV N+V G L H E+ ++F GS G+ V + ++
Sbjct: 184 TEKLVELFEKAGLPKGVFNVVYGAHDVVNGIL-EHPEIKAISFVGSKPVGEYVYKKGSE- 241
Query: 253 NLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFVE 312
NLK V G K+ IV DA+++ A F + G+ C A + V E + D+F+
Sbjct: 242 NLKRVQSLTGAKNHTIVLNDANLEDTVTNIVGAAFGSAGERCMACAVVTVEEGIADEFMA 301
Query: 313 KANALAMKRVVGDPFKGGIQQGPQIDSEQFEKILKYIRSGVDGGAKLETGG-ERLGAKGY 371
K +G+ G+ GP I + ++ L YI G++ GA+L G E + GY
Sbjct: 302 KLQEKVADIKIGNGLDDGVFLGPVIREDNKKRTLSYIEKGLEEGARLVCDGRENVSDDGY 361
Query: 372 YIKPTVFTGVKDDMLIAKDEIFGPVQSILKYKDLDEVIQRSNASQYGLAAGVFTHNLDTA 431
++ PT+F V +M I KDEIF PV S+++ K+L E I+ +N S++ A +FT N +
Sbjct: 362 FVGPTIFDNVTTEMTIWKDEIFAPVLSVIRVKNLKEAIEIANKSEFANGACLFTSNSNAI 421
Query: 432 NTLMRALRVGSVWINC-FDVFDAAIPFGGYKQS--GQGREKGSYSLSNYLQVKAVVTA 486
+ G + IN A PF G+K S G G S+ Y + K VVTA
Sbjct: 422 RYFRENIDAGMLGINLGVPAPMAFFPFSGWKSSFFGTLHANGKDSVDFYTR-KKVVTA 478
>pdb|2BJA|A Chain A, Crystal Analysis Of 1-Pyrroline-5-Carboxylate
Dehydrogenase From Thermus With Bound Nadh
pdb|2BJA|B Chain B, Crystal Analysis Of 1-Pyrroline-5-Carboxylate
Dehydrogenase From Thermus With Bound Nadh
pdb|2J40|A Chain A, 1-Pyrroline-5-Carboxylate Dehydrogenase From Thermus
Thermophilus With Bound Inhibitor L-Proline And Nad.
pdb|2J40|B Chain B, 1-Pyrroline-5-Carboxylate Dehydrogenase From Thermus
Thermophilus With Bound Inhibitor L-Proline And Nad.
pdb|2EJD|A Chain A, Crystal Analysis Of Delta1-Pyrroline-5-Carboxylate
Dehydrogenase From Thermus Thermophilus With Bound
L-Alanine
pdb|2EJD|B Chain B, Crystal Analysis Of Delta1-Pyrroline-5-Carboxylate
Dehydrogenase From Thermus Thermophilus With Bound
L-Alanine
pdb|2EJL|A Chain A, Crystal Analysis Of Delta1-pyrroline-5-carboxylate
Dehydrogenase From Thermus Thermophilus With Bound
L-serine
pdb|2EJL|B Chain B, Crystal Analysis Of Delta1-pyrroline-5-carboxylate
Dehydrogenase From Thermus Thermophilus With Bound
L-serine
Length = 516
Score = 154 bits (388), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 102/294 (34%), Positives = 150/294 (51%), Gaps = 10/294 (3%)
Query: 198 QTLHEPIGVAGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLAAK-----S 252
+ HE GV+N + G G GA L H + + FTGS G + + A + +
Sbjct: 221 EIFHEAGFPPGVVNFLPGVGEEVGAYLVEHPRIRFINFTGSLEVGLKIYEAAGRLAPGQT 280
Query: 253 NLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFVE 312
K +E GGK IV E AD D AAE + + QGQ A SR + + Y+ +E
Sbjct: 281 WFKRAYVETGGKDAIIVDETADFDLAAEGVVVSAYGFQGQKXSAASRLILTQGAYEPVLE 340
Query: 313 KANALAMKRVVGDPFKGGIQQGPQIDSEQFEKILKYIRSGVDGGAKLETGGERLGAKGYY 372
+ A + VG P + GP + +EQ K+L YI G + G +L GG+RL +GY+
Sbjct: 341 RVLKRAERLSVG-PAEENPDLGPVVSAEQERKVLSYIEIGKNEG-QLVLGGKRLEGEGYF 398
Query: 373 IKPTVFTGVKDDMLIAKDEIFGPVQSILKYKDLDEVIQRSNASQYGLAAGVFTHNLDTAN 432
I PTVFT V IA++EIFGPV S+++ KD E ++ +N + YGL GV++ +
Sbjct: 399 IAPTVFTEVPPKARIAQEEIFGPVLSVIRVKDFAEALEVANDTPYGLTGGVYSRKREHLE 458
Query: 433 TLMRALRVGSVWIN--CFDVFDAAIPFGGYKQSGQGREKGSYS-LSNYLQVKAV 483
R VG+++ N PFGG+K SG + G+ L +L++KAV
Sbjct: 459 WARREFHVGNLYFNRKITGALVGVQPFGGFKLSGTNAKTGALDYLRLFLEMKAV 512
>pdb|1EUH|A Chain A, Apo Form Of A Nadp Dependent Aldehyde Dehydrogenase From
Streptococcus Mutans
pdb|1EUH|B Chain B, Apo Form Of A Nadp Dependent Aldehyde Dehydrogenase From
Streptococcus Mutans
pdb|1EUH|C Chain C, Apo Form Of A Nadp Dependent Aldehyde Dehydrogenase From
Streptococcus Mutans
pdb|1EUH|D Chain D, Apo Form Of A Nadp Dependent Aldehyde Dehydrogenase From
Streptococcus Mutans
pdb|2EUH|A Chain A, Holo Form Of A Nadp Dependent Aldehyde Dehydrogenase
Complex With Nadp+
pdb|2EUH|B Chain B, Holo Form Of A Nadp Dependent Aldehyde Dehydrogenase
Complex With Nadp+
pdb|2EUH|C Chain C, Holo Form Of A Nadp Dependent Aldehyde Dehydrogenase
Complex With Nadp+
pdb|2EUH|D Chain D, Holo Form Of A Nadp Dependent Aldehyde Dehydrogenase
Complex With Nadp+
pdb|1QI6|A Chain A, Second Apo Form Of An Nadp Dependent Aldehyde
Dehydrogenase With Glu250 Situated 3.7 A From Cys284
pdb|1QI6|B Chain B, Second Apo Form Of An Nadp Dependent Aldehyde
Dehydrogenase With Glu250 Situated 3.7 A From Cys284
pdb|1QI6|C Chain C, Second Apo Form Of An Nadp Dependent Aldehyde
Dehydrogenase With Glu250 Situated 3.7 A From Cys284
pdb|1QI6|D Chain D, Second Apo Form Of An Nadp Dependent Aldehyde
Dehydrogenase With Glu250 Situated 3.7 A From Cys284
Length = 475
Score = 148 bits (373), Expect = 7e-36, Method: Compositional matrix adjust.
Identities = 103/287 (35%), Positives = 148/287 (51%), Gaps = 16/287 (5%)
Query: 207 AGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLAAKSNLKPVTLELGGKSP 266
AGV N ++G G G + H V+ + FTGST G+ + ++A ++P+ LELGGK
Sbjct: 200 AGVFNTITGRGSEIGDYIVEHQAVNFINFTGSTGIGERIGKMAG---MRPIMLELGGKDS 256
Query: 267 FIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMKRVVGDP 326
IV EDAD++ A+ F GQ C A R V ESV D+ VEK + +G+P
Sbjct: 257 AIVLEDADLELTAKNIIAGAFGYSGQRCTAVKRVLVMESVADELVEKIREKVLALTIGNP 316
Query: 327 FKGGIQQGPQIDSEQFEKILKYIRSGVDGGAKLETGGERLGAKGYYIKPTVFTGVKDDML 386
+ P ID++ + + I D GA T +R +G I P +F V DM
Sbjct: 317 -EDDADITPLIDTKSADYVEGLINDANDKGATALTEIKR---EGNLICPILFDKVTTDMR 372
Query: 387 IAKDEIFGPVQSILKYKDLDEVIQRSNASQYGLAAGVFTHNLDTANTLMRALRVGSVWIN 446
+A +E FGPV I++ ++E I+ SN S+YGL A +FT++ A + L VG+V IN
Sbjct: 373 LAWEEPFGPVLPIIRVTSVEEAIEISNKSEYGLQASIFTNDFPRAFGIAEQLEVGTVHIN 432
Query: 447 C-----FDVFDAAIPFGGYKQSGQGREKGSYSLSNYLQVKAVVTALK 488
D F PF G K+SG G + YS+ VK+VV +K
Sbjct: 433 NKTQRGTDNF----PFLGAKKSGAGIQGVKYSIEAMTTVKSVVFDIK 475
>pdb|3ROS|A Chain A, Crystal Structure Of Nad-Dependent Aldehyde Dehydrogenase
From Lactobacillus Acidophilus
Length = 484
Score = 147 bits (372), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 116/459 (25%), Positives = 192/459 (41%), Gaps = 56/459 (12%)
Query: 83 FPTLDPRTGDVITHVAEGEAEDVNRAVSAARKAFDEGPWPRMTAYERSKIILRFADLLER 142
+ +++P T + ++ ++ A++ A + + W R++I+ A+ L+
Sbjct: 6 YQSVNPYTNEAFASYDNPTSKQIDEAINLAHALYKK--WRHEEPASRAEILHDIANALKE 63
Query: 143 HNDEIAALETWDNGKPFEQSAQTEVPMTTRLFRYYA----------------GWADKIQG 186
H DE+A T + GK +S + EV + + YYA G A ++
Sbjct: 64 HEDELAKXXTLEXGKLLSESKE-EVELCVSICNYYADHGPEXLKPTKLNSDLGNAYYLKQ 122
Query: 187 LTA------PADGP-YHVQTLHEPIGVAG-----------------VLNIVSGYGPTAGA 222
T P + P Y V + P + G I+ G G+
Sbjct: 123 STGVIXACEPWNFPLYQVIRVFAPNFIVGNPILLKHAHNVPGSAALTAKIIKRAGAPEGS 182
Query: 223 ALASHMEVDKLA------------FTGSTTTGKIVLQLAAKSNLKPVTLELGGKSPFIVC 270
+ + D+LA TGS G V + A K NLK T ELGG FIV
Sbjct: 183 LINLYPSYDQLADIIADPRIQGVALTGSERGGSAVAEAAGK-NLKKSTXELGGNDAFIVL 241
Query: 271 EDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMKRVVGDPFKGG 330
+DAD + + A +N GQ C + R V +S YD+ + + + GDP +
Sbjct: 242 DDADPQVLRNVLNDARTYNDGQVCTSSKRIIVEKSRYDEVLHELKNVFSNLKAGDPLEAD 301
Query: 331 IQQGPQIDSEQFEKILKYIRSGVDGGAKLETGGERLGAKGYYIKPTVFTGVKDDMLIAKD 390
P + EK+ ++ +D GAK+ + +KG + +PT+ T + D +
Sbjct: 302 TTLPPXNSEKAKEKLEAQVKEAIDAGAKVFYQYPEIDSKGAFFRPTILTDIAKDNPVFDK 361
Query: 391 EIFGPVQSILKYKDLDEVIQRSNASQYGLAAGVFTHNLDTANTLMRALRVGSVWINCFDV 450
E+FGP+ + +D + IQ +N S YGL + V ++D A + + G IN +
Sbjct: 362 EVFGPIAEVFVVEDDNAAIQLANDSSYGLGSSVIGSDIDRAKKVSAQIETGXTVINGRWI 421
Query: 451 FDAAIPFGGYKQSGQGREKGSYSLSNYLQVKAVVTALKN 489
+PFGG K+SG GRE L ++ V+ KN
Sbjct: 422 TSGELPFGGIKKSGYGRELSGLGLXAFVNEHLVIDVTKN 460
>pdb|2ID2|A Chain A, Gapn T244s Mutant X-Ray Structure At 2.5 A
pdb|2ID2|B Chain B, Gapn T244s Mutant X-Ray Structure At 2.5 A
pdb|2ID2|C Chain C, Gapn T244s Mutant X-Ray Structure At 2.5 A
pdb|2ID2|D Chain D, Gapn T244s Mutant X-Ray Structure At 2.5 A
Length = 475
Score = 147 bits (370), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 102/287 (35%), Positives = 148/287 (51%), Gaps = 16/287 (5%)
Query: 207 AGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLAAKSNLKPVTLELGGKSP 266
AGV N ++G G G + H V+ + F+GST G+ + ++A ++P+ LELGGK
Sbjct: 200 AGVFNTITGRGSEIGDYIVEHQAVNFINFSGSTGIGERIGKMAG---MRPIMLELGGKDS 256
Query: 267 FIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMKRVVGDP 326
IV EDAD++ A+ F GQ C A R V ESV D+ VEK + +G+P
Sbjct: 257 AIVLEDADLELTAKNIIAGAFGYSGQRCTAVKRVLVMESVADELVEKIREKVLALTIGNP 316
Query: 327 FKGGIQQGPQIDSEQFEKILKYIRSGVDGGAKLETGGERLGAKGYYIKPTVFTGVKDDML 386
+ P ID++ + + I D GA T +R +G I P +F V DM
Sbjct: 317 -EDDADITPLIDTKSADYVEGLINDANDKGATALTEIKR---EGNLICPILFDKVTTDMR 372
Query: 387 IAKDEIFGPVQSILKYKDLDEVIQRSNASQYGLAAGVFTHNLDTANTLMRALRVGSVWIN 446
+A +E FGPV I++ ++E I+ SN S+YGL A +FT++ A + L VG+V IN
Sbjct: 373 LAWEEPFGPVLPIIRVTSVEEAIEISNKSEYGLQASIFTNDFPRAFGIAEQLEVGTVHIN 432
Query: 447 C-----FDVFDAAIPFGGYKQSGQGREKGSYSLSNYLQVKAVVTALK 488
D F PF G K+SG G + YS+ VK+VV +K
Sbjct: 433 NKTQRGTDNF----PFLGAKKSGAGIQGVKYSIEAMTTVKSVVFDIK 475
>pdb|2ESD|A Chain A, Crystal Structure Of Thioacylenzyme Intermediate Of An
Nadp Dependent Aldehyde Dehydrogenase
pdb|2ESD|B Chain B, Crystal Structure Of Thioacylenzyme Intermediate Of An
Nadp Dependent Aldehyde Dehydrogenase
pdb|2ESD|C Chain C, Crystal Structure Of Thioacylenzyme Intermediate Of An
Nadp Dependent Aldehyde Dehydrogenase
pdb|2ESD|D Chain D, Crystal Structure Of Thioacylenzyme Intermediate Of An
Nadp Dependent Aldehyde Dehydrogenase
pdb|2QE0|A Chain A, Thioacylenzyme Intermediate Of Gapn From S. Mutans, New
Data Integration And Refinement.
pdb|2QE0|B Chain B, Thioacylenzyme Intermediate Of Gapn From S. Mutans, New
Data Integration And Refinement.
pdb|2QE0|C Chain C, Thioacylenzyme Intermediate Of Gapn From S. Mutans, New
Data Integration And Refinement.
pdb|2QE0|D Chain D, Thioacylenzyme Intermediate Of Gapn From S. Mutans, New
Data Integration And Refinement
Length = 475
Score = 145 bits (367), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 102/287 (35%), Positives = 147/287 (51%), Gaps = 16/287 (5%)
Query: 207 AGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLAAKSNLKPVTLELGGKSP 266
AGV N ++G G G + H V+ + FTGST G+ + ++A ++P+ L LGGK
Sbjct: 200 AGVFNTITGRGSEIGDYIVEHQAVNFINFTGSTGIGERIGKMAG---MRPIMLALGGKDS 256
Query: 267 FIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMKRVVGDP 326
IV EDAD++ A+ F GQ C A R V ESV D+ VEK + +G+P
Sbjct: 257 AIVLEDADLELTAKNIIAGAFGYSGQRCTAVKRVLVMESVADELVEKIREKVLALTIGNP 316
Query: 327 FKGGIQQGPQIDSEQFEKILKYIRSGVDGGAKLETGGERLGAKGYYIKPTVFTGVKDDML 386
+ P ID++ + + I D GA T +R +G I P +F V DM
Sbjct: 317 -EDDADITPLIDTKSADYVEGLINDANDKGATALTEIKR---EGNLICPILFDKVTTDMR 372
Query: 387 IAKDEIFGPVQSILKYKDLDEVIQRSNASQYGLAAGVFTHNLDTANTLMRALRVGSVWIN 446
+A +E FGPV I++ ++E I+ SN S+YGL A +FT++ A + L VG+V IN
Sbjct: 373 LAWEEPFGPVLPIIRVTSVEEAIEISNKSEYGLQASIFTNDFPRAFGIAEQLEVGTVHIN 432
Query: 447 C-----FDVFDAAIPFGGYKQSGQGREKGSYSLSNYLQVKAVVTALK 488
D F PF G K+SG G + YS+ VK+VV +K
Sbjct: 433 NKTQRGTDNF----PFLGAKKSGAGIQGVKYSIEAMTTVKSVVFDIK 475
>pdb|1KY8|A Chain A, Crystal Structure Of The Non-Phosphorylating
Glyceraldehyde-3- Phosphate Dehydrogenase
Length = 501
Score = 145 bits (367), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 132/471 (28%), Positives = 195/471 (41%), Gaps = 76/471 (16%)
Query: 79 SGKTFPTLDPRTGDVITHVAEGEAEDVNRAVSAARKAFDEGPWPR--MTAYERSKIILRF 136
SG+ P I V E+V R + F G W M ER ++ +
Sbjct: 30 SGQEIEVKSPIDLATIAKVISPSREEVERTLDVL---FKRGRWSARDMPGTERLAVLRKA 86
Query: 137 ADLLERHNDEIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADKIQGLTAPADGPYH 196
AD++ER+ D A + + GKP + +A EV R KI G P D Y
Sbjct: 87 ADIIERNLDVFAEVLVMNAGKP-KSAAVGEVKAAVDRLRLAELDLKKIGGDYIPGDWTYD 145
Query: 197 VQ-----TLHEPIGVAGVLN---------------------------------------- 211
EP+GV +
Sbjct: 146 TLETEGLVRREPLGVVAAITPFNYPLFDAVNKITYSFIYGNAVVVKPSISDPLPAAMAVK 205
Query: 212 --IVSGYGPTAGAAL----------ASHMEVDKLAFTGSTTTGKIVLQLAAKSNLKPVTL 259
+ +G+ P A A L + V ++FTGST G+ V+++ +K +
Sbjct: 206 ALLDAGFPPDAIALLNLPGKEAEKIVADDRVAAVSFTGSTEVGERVVKV---GGVKQYVM 262
Query: 260 ELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFVEKANALAM 319
ELGG P IV EDAD+D AA+ ++ GQ C A VY + VE+
Sbjct: 263 ELGGGDPAIVLEDADLDLAADKIARGIYSYAGQRCDAIKLVLAERPVYGKLVEEVAKRLS 322
Query: 320 KRVVGDPFKGGIQQGPQIDSEQFEKILKYIRSGVDGGAKLETGGERLGAKGYYIKPTVFT 379
VGDP + GP I ++++ I V+ G ++ GG RLG Y++PT+
Sbjct: 323 SLRVGDPRDPTVDVGPLISPSAVDEMMAAIEDAVEKGGRVLAGGRRLGPT--YVQPTLVE 380
Query: 380 GVKD---DMLIAKDEIFGPVQSILKYKDLDEVIQRSNASQYGLAAGVFTHNLDTANTLMR 436
D DM++ K E+F PV S ++ KDLD+ I+ +N YGL A VF ++ +R
Sbjct: 381 APADRVKDMVLYKREVFAPVASAVEVKDLDQAIELANGRPYGLDAAVFGRDVVKIRRAVR 440
Query: 437 ALRVGSVWINCFDVFDAAI---PFGGYKQSGQGREKGSYSLSNYLQVKAVV 484
L VG+++IN D+ I PFGG K+SG RE Y++ K +V
Sbjct: 441 LLEVGAIYIN--DMPRHGIGYYPFGGRKKSGVFREGIGYAVEAVTAYKTIV 489
>pdb|1QI1|A Chain A, Ternary Complex Of An Nadp Dependent Aldehyde
Dehydrogenase
pdb|1QI1|B Chain B, Ternary Complex Of An Nadp Dependent Aldehyde
Dehydrogenase
pdb|1QI1|C Chain C, Ternary Complex Of An Nadp Dependent Aldehyde
Dehydrogenase
pdb|1QI1|D Chain D, Ternary Complex Of An Nadp Dependent Aldehyde
Dehydrogenase
Length = 475
Score = 144 bits (363), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 102/287 (35%), Positives = 147/287 (51%), Gaps = 16/287 (5%)
Query: 207 AGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLAAKSNLKPVTLELGGKSP 266
AGV N ++G G G + H V+ + FTGST G+ + ++A ++P+ LELGGK
Sbjct: 200 AGVFNTITGRGSEIGDYIVEHQAVNFINFTGSTGIGERIGKMAG---MRPIMLELGGKDS 256
Query: 267 FIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMKRVVGDP 326
IV EDAD++ A+ F GQ A R V ESV D+ VEK + +G+P
Sbjct: 257 AIVLEDADLELTAKNIIAGAFGYSGQRSTAVKRVLVMESVADELVEKIREKVLALTIGNP 316
Query: 327 FKGGIQQGPQIDSEQFEKILKYIRSGVDGGAKLETGGERLGAKGYYIKPTVFTGVKDDML 386
+ P ID++ + + I D GA T +R +G I P +F V DM
Sbjct: 317 -EDDADITPLIDTKSADYVEGLINDANDKGATALTEIKR---EGNLICPILFDKVTTDMR 372
Query: 387 IAKDEIFGPVQSILKYKDLDEVIQRSNASQYGLAAGVFTHNLDTANTLMRALRVGSVWIN 446
+A +E FGPV I++ ++E I+ SN S+YGL A +FT++ A + L VG+V IN
Sbjct: 373 LAWEEPFGPVLPIIRVTSVEEAIEISNKSEYGLQASIFTNDFPRAFGIAEQLEVGTVHIN 432
Query: 447 C-----FDVFDAAIPFGGYKQSGQGREKGSYSLSNYLQVKAVVTALK 488
D F PF G K+SG G + YS+ VK+VV +K
Sbjct: 433 NKTQRGTDNF----PFLGAKKSGAGIQGVKYSIEAMTTVKSVVFDIK 475
>pdb|1UXV|A Chain A, Structural Basis For Allosteric Regulation And Substrate
Specificity Of The Non-Phosphorylating
Glyceraldehyde-3-Phosphate Dehydrogenase (Gapn) From
Thermoproteus Tenax
Length = 501
Score = 143 bits (360), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 131/471 (27%), Positives = 194/471 (41%), Gaps = 76/471 (16%)
Query: 79 SGKTFPTLDPRTGDVITHVAEGEAEDVNRAVSAARKAFDEGPWPR--MTAYERSKIILRF 136
SG+ P I V E+V R + F G W M ER ++ +
Sbjct: 30 SGQEIEVKSPIDLATIAKVISPSREEVERTLDVL---FKRGRWSARDMPGTERLAVLRKA 86
Query: 137 ADLLERHNDEIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADKIQGLTAPADGPYH 196
AD++ER+ D A + + GKP + +A EV R KI G P D Y
Sbjct: 87 ADIIERNLDVFAEVLVMNAGKP-KSAAVGEVKAAVDRLRLAELDLKKIGGDYIPGDWTYD 145
Query: 197 VQ-----TLHEPIGVAGVLN---------------------------------------- 211
EP+GV +
Sbjct: 146 TLETEGLVRREPLGVVAAITPFNYPLFDAVNKITYSFIYGNAVVVKPSISDPLPAAMAVK 205
Query: 212 --IVSGYGPTAGAAL----------ASHMEVDKLAFTGSTTTGKIVLQLAAKSNLKPVTL 259
+ +G+ P A A L + V ++FTGST G+ V+++ +K +
Sbjct: 206 ALLDAGFPPDAIALLNLPGKEAEKIVADDRVAAVSFTGSTEVGERVVKV---GGVKQYVM 262
Query: 260 ELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFVEKANALAM 319
ELGG P IV EDAD+D AA+ ++ GQ C A VY + VE+
Sbjct: 263 ELGGGDPAIVLEDADLDLAADKIARGIYSYAGQRCDAIKLVLAERPVYGKLVEEVAKRLS 322
Query: 320 KRVVGDPFKGGIQQGPQIDSEQFEKILKYIRSGVDGGAKLETGGERLGAKGYYIKPTVFT 379
VGDP + GP I ++++ I V+ G ++ GG RLG Y++PT+
Sbjct: 323 SLRVGDPRDPTVDVGPLISPSAVDEMMAAIEDAVEKGGRVLAGGRRLGPT--YVQPTLVE 380
Query: 380 GVKD---DMLIAKDEIFGPVQSILKYKDLDEVIQRSNASQYGLAAGVFTHNLDTANTLMR 436
D DM++ K E+F PV ++ KDLD+ I+ +N YGL A VF ++ +R
Sbjct: 381 APADRVKDMVLYKREVFAPVALAVEVKDLDQAIELANGRPYGLDAAVFGRDVVKIRRAVR 440
Query: 437 ALRVGSVWINCFDVFDAAI---PFGGYKQSGQGREKGSYSLSNYLQVKAVV 484
L VG+++IN D+ I PFGG K+SG RE Y++ K +V
Sbjct: 441 LLEVGAIYIN--DMPRHGIGYYPFGGRKKSGVFREGIGYAVEAVTAYKTIV 489
>pdb|1UXN|A Chain A, Structural Basis For Allosteric Regulation And Substrate
Specificity Of The Non-Phosphorylating
Glyceraldehyde-3-Phosphate Dehydrogenase (Gapn) From
Thermoproteus Tenax
pdb|1UXP|A Chain A, Structural Basis For Allosteric Regulation And Substrate
Specificity Of The Non-Phosphorylating
Glyceraldehyde-3-Phosphate Dehydrogenase (Gapn) From
Thermoproteus Tenax
pdb|1UXQ|A Chain A, Structural Basis For Allosteric Regulation And Substrate
Specificity Of The Non-Phosphorylating
Glyceraldehyde-3-Phosphate Dehydrogenase (Gapn) From
Thermoproteus Tenax
pdb|1UXR|A Chain A, Structural Basis For Allosteric Regulation And Substrate
Specificity Of The Non-Phosphorylating
Glyceraldehyde-3-Phosphate Dehydrogenase (Gapn) From
Thermoproteus Tenax
pdb|1UXT|A Chain A, Structural Basis For Allosteric Regulation And Substrate
Specificity Of The Non-phosphorylating
Glyceraldehyde-3-phosphate Dehydrogenase (gapn) From
Thermoproteus Tenax
pdb|1UXU|A Chain A, Structural Basis For Allosteric Regulation And Substrate
Specificity Of The Non-Phosphorylating
Glyceraldehyde-3-Phosphate Dehydrogenase (Gapn) From
Thermoproteus Tenax
Length = 501
Score = 142 bits (358), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 131/471 (27%), Positives = 193/471 (40%), Gaps = 76/471 (16%)
Query: 79 SGKTFPTLDPRTGDVITHVAEGEAEDVNRAVSAARKAFDEGPWPR--MTAYERSKIILRF 136
SG+ P I V E+V R + F G W M ER ++ +
Sbjct: 30 SGQEIEVKSPIDLATIAKVISPSREEVERTLDVL---FKRGRWSARDMPGTERLAVLRKA 86
Query: 137 ADLLERHNDEIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADKIQGLTAPADGPYH 196
AD++ER+ D A + + GKP + +A EV R KI G P D Y
Sbjct: 87 ADIIERNLDVFAEVLVMNAGKP-KSAAVGEVKAAVDRLRLAELDLKKIGGDYIPGDWTYD 145
Query: 197 VQ-----TLHEPIGVAGVLN---------------------------------------- 211
EP+GV +
Sbjct: 146 TLETEGLVRREPLGVVAAITPFNYPLFDAVNKITYSFIYGNAVVVKPSISDPLPAAMAVK 205
Query: 212 --IVSGYGPTAGAAL----------ASHMEVDKLAFTGSTTTGKIVLQLAAKSNLKPVTL 259
+ +G+ P A A L + V ++FTGST G+ V+++ +K +
Sbjct: 206 ALLDAGFPPDAIALLNLPGKEAEKIVADDRVAAVSFTGSTEVGERVVKV---GGVKQYVM 262
Query: 260 ELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFVEKANALAM 319
ELGG P IV EDAD+D AA+ ++ GQ C A VY + VE+
Sbjct: 263 ELGGGDPAIVLEDADLDLAADKIARGIYSYAGQRCDAIKLVLAERPVYGKLVEEVAKRLS 322
Query: 320 KRVVGDPFKGGIQQGPQIDSEQFEKILKYIRSGVDGGAKLETGGERLGAKGYYIKPTVFT 379
VGDP + GP I ++++ I V+ G ++ GG RLG Y++PT
Sbjct: 323 SLRVGDPRDPTVDVGPLISPSAVDEMMAAIEDAVEKGGRVLAGGRRLGPT--YVQPTFVE 380
Query: 380 GVKD---DMLIAKDEIFGPVQSILKYKDLDEVIQRSNASQYGLAAGVFTHNLDTANTLMR 436
D DM++ K E+F PV ++ KDLD+ I+ +N YGL A VF ++ +R
Sbjct: 381 APADRVKDMVLYKREVFAPVALAVEVKDLDQAIELANGRPYGLDAAVFGRDVVKIRRAVR 440
Query: 437 ALRVGSVWINCFDVFDAAI---PFGGYKQSGQGREKGSYSLSNYLQVKAVV 484
L VG+++IN D+ I PFGG K+SG RE Y++ K +V
Sbjct: 441 LLEVGAIYIN--DMPRHGIGYYPFGGRKKSGVFREGIGYAVEAVTAYKTIV 489
>pdb|3PRL|A Chain A, Crystal Structure Of Nadp-Dependent
Glyceraldehyde-3-Phosphate Dehydrogenase From Bacillus
Halodurans C-125
pdb|3PRL|B Chain B, Crystal Structure Of Nadp-Dependent
Glyceraldehyde-3-Phosphate Dehydrogenase From Bacillus
Halodurans C-125
pdb|3PRL|C Chain C, Crystal Structure Of Nadp-Dependent
Glyceraldehyde-3-Phosphate Dehydrogenase From Bacillus
Halodurans C-125
pdb|3PRL|D Chain D, Crystal Structure Of Nadp-Dependent
Glyceraldehyde-3-Phosphate Dehydrogenase From Bacillus
Halodurans C-125
pdb|3RHH|A Chain A, Crystal Structure Of Nadp-Dependent
Glyceraldehyde-3-Phosphate Dehydrogenase From Bacillus
Halodurans C-125 Complexed With Nadp
pdb|3RHH|B Chain B, Crystal Structure Of Nadp-Dependent
Glyceraldehyde-3-Phosphate Dehydrogenase From Bacillus
Halodurans C-125 Complexed With Nadp
pdb|3RHH|C Chain C, Crystal Structure Of Nadp-Dependent
Glyceraldehyde-3-Phosphate Dehydrogenase From Bacillus
Halodurans C-125 Complexed With Nadp
pdb|3RHH|D Chain D, Crystal Structure Of Nadp-Dependent
Glyceraldehyde-3-Phosphate Dehydrogenase From Bacillus
Halodurans C-125 Complexed With Nadp
Length = 505
Score = 138 bits (348), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 142/485 (29%), Positives = 208/485 (42%), Gaps = 78/485 (16%)
Query: 67 QLLINGQFVDSASGKTFPTLDPRTGDVITHVAEGEAEDVNRAVSAARKAFDEGPWPRMTA 126
+L NG++V+S +G+ P +G + + E+VN A+ A+ A + W
Sbjct: 13 NILRNGEWVESRTGERISISAPASGVALGSIPALSQEEVNDAIQGAKDA--QKIWKIRPI 70
Query: 127 YERSKIIL---------------------------------RFADLLERHNDEIAAL--E 151
+ER ++ R AD++ DE L E
Sbjct: 71 HERVDLLYAWADLLEERKEIIGELIMHEVAKPKKSAIGEVSRTADIIRHTADEALRLNGE 130
Query: 152 TWDNGKPFEQSAQTEVPMTTRL----------FRYYAGWADK------IQGLTA---PA- 191
T G F+ + ++ + R F Y A + G T PA
Sbjct: 131 TL-KGDQFKGGSSKKIALVEREPLGVVLAISPFNYPVNLAAAKIAPALVTGNTVVFKPAT 189
Query: 192 ----DGPYHVQTLHEPIGVAGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQ 247
G V+ L + G++ +V+G G G L H +D + FTG TTTG+ +
Sbjct: 190 QGSLSGIKMVEALADAGAPEGIIQVVTGRGSVIGDHLVEHPGIDMITFTGGTTTGE---R 246
Query: 248 LAAKSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVY 307
++ K+ + PV LELGGK P IV +DAD+ A F GQ C A R FV +SV
Sbjct: 247 ISEKAKMIPVVLELGGKDPAIVLDDADLKLTASQIVSGAFSYSGQRCTAIKRVFVQDSVA 306
Query: 308 DQFVEKANALAMKRVVGDPFKGGIQQGPQIDSEQFEKILKYIRSGVDGGAKLETGGERLG 367
DQ V L + VG P + P ID + I I ++ GA L +G +R
Sbjct: 307 DQLVANIKELVEQLTVGSP-EDDADITPVIDEKSAAFIQGLIDDALENGATLLSGNKR-- 363
Query: 368 AKGYYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYKDLDEVIQRSNASQYGLAAGVFTHN 427
+G + PT+ V M +A +E FGPV I++ KD +E I SN S YGL A +FT +
Sbjct: 364 -QGNLLSPTLLDDVTPAMRVAWEEPFGPVLPIIRVKDANEAISLSNQSDYGLQASIFTKD 422
Query: 428 LDTANTLMRALRVGSVWINCF-----DVFDAAIPFGGYKQSGQGREKGSYSLSNYLQVKA 482
D A + + L VG+V IN D F PF G K+SG G + SL + + +
Sbjct: 423 TDRAINIGKHLEVGTVHINAKTERGPDHF----PFLGVKKSGLGVQGIKPSLLSMTRERV 478
Query: 483 VVTAL 487
V L
Sbjct: 479 TVLNL 483
>pdb|3EFV|A Chain A, Crystal Structure Of A Putative Succinate-Semialdehyde
Dehydrogenase From Salmonella Typhimurium Lt2 With Bound
Nad
pdb|3EFV|B Chain B, Crystal Structure Of A Putative Succinate-Semialdehyde
Dehydrogenase From Salmonella Typhimurium Lt2 With Bound
Nad
pdb|3EFV|C Chain C, Crystal Structure Of A Putative Succinate-Semialdehyde
Dehydrogenase From Salmonella Typhimurium Lt2 With Bound
Nad
pdb|3EFV|D Chain D, Crystal Structure Of A Putative Succinate-Semialdehyde
Dehydrogenase From Salmonella Typhimurium Lt2 With Bound
Nad
pdb|3ETF|A Chain A, Crystal Structure Of A Putative Succinate-Semialdehyde
Dehydrogenase From Salmonella Typhimurium Lt2
pdb|3ETF|B Chain B, Crystal Structure Of A Putative Succinate-Semialdehyde
Dehydrogenase From Salmonella Typhimurium Lt2
pdb|3ETF|C Chain C, Crystal Structure Of A Putative Succinate-Semialdehyde
Dehydrogenase From Salmonella Typhimurium Lt2
pdb|3ETF|D Chain D, Crystal Structure Of A Putative Succinate-Semialdehyde
Dehydrogenase From Salmonella Typhimurium Lt2
Length = 462
Score = 138 bits (347), Expect = 8e-33, Method: Compositional matrix adjust.
Identities = 80/230 (34%), Positives = 116/230 (50%)
Query: 254 LKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFVEK 313
LK LELGG PFIV DAD++ A + A + N GQ C A R V E + F ++
Sbjct: 228 LKKCVLELGGSDPFIVLNDADLELAVKAAVAGRYQNTGQVCAAAKRFIVEEGIAQAFTDR 287
Query: 314 ANALAMKRVVGDPFKGGIQQGPQIDSEQFEKILKYIRSGVDGGAKLETGGERLGAKGYYI 373
A A GDP GP + +++ + +++ V GA+L GGE++ +G Y
Sbjct: 288 FVAAAAALKXGDPLVEENDLGPXARFDLRDELHQQVQASVAEGARLLLGGEKIAGEGNYY 347
Query: 374 KPTVFTGVKDDMLIAKDEIFGPVQSILKYKDLDEVIQRSNASQYGLAAGVFTHNLDTANT 433
TV V D + E+FGPV +I KD + +N S++GL+A +FT + A
Sbjct: 348 AATVLADVTPDXTAFRQELFGPVAAITVAKDAAHALALANDSEFGLSATIFTADDTLAAE 407
Query: 434 LMRALRVGSVWINCFDVFDAAIPFGGYKQSGQGREKGSYSLSNYLQVKAV 483
L G V+IN + DA + FGG K+SG GRE + L + V+ V
Sbjct: 408 XAARLECGGVFINGYSASDARVAFGGVKKSGFGRELSHFGLHEFCNVQTV 457
>pdb|4F9I|A Chain A, Crystal Structure Of Proline Utilization A (Puta) From
Geobacter Sulfurreducens Pca
pdb|4F9I|B Chain B, Crystal Structure Of Proline Utilization A (Puta) From
Geobacter Sulfurreducens Pca
Length = 1026
Score = 137 bits (346), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 95/284 (33%), Positives = 152/284 (53%), Gaps = 9/284 (3%)
Query: 195 YHVQTLHEPIGV-AGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLAAK-- 251
+H+ L G+ GV N G G G L H ++ +AFTGS TG +++ AAK
Sbjct: 710 WHLVELFREAGLPEGVFNFTPGRGSVMGDYLVDHPDISLIAFTGSMETGLRIIERAAKVH 769
Query: 252 ---SNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYD 308
+N+K + E+GGK+ I+ +DAD+D+A Y+ F QGQ C A SR V ++VYD
Sbjct: 770 PGQANVKKIISEMGGKNAIIIDDDADLDEAVPHVLYSAFGFQGQKCSACSRVIVLDAVYD 829
Query: 309 QFVEKANALAMKRVVGDPFKGGIQQGPQIDSEQFEKILKYIRSGVDGGAKLETGGERLGA 368
+F+E+ ++A VG G D + + I +Y G G L G
Sbjct: 830 KFIERLVSMAKATKVGPSEDPANYMGAVADDKAMKSIKEYAEIGKREGHVLYESPVPAG- 888
Query: 369 KGYYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYKDLDEVIQRSNASQYGLAAGVFTHNL 428
+GY++ T+ G+K + IA++EIFGPV ++++ KD D+ I+ +N++Q+ L G+F+ +
Sbjct: 889 EGYFVPMTIIGGIKPEHRIAQEEIFGPVLAVMRAKDFDQAIEWANSTQFALTGGIFSRSP 948
Query: 429 DTANTLMRALRVGSVWINCFDV--FDAAIPFGGYKQSGQGREKG 470
+ R RVG+++IN + PFGG + SG G + G
Sbjct: 949 EHLAKARREFRVGNLYINRNNTGALVERQPFGGARMSGVGTKAG 992
>pdb|2JG7|A Chain A, Crystal Structure Of Seabream Antiquitin And Elucidation
Of Its Substrate Specificity
pdb|2JG7|B Chain B, Crystal Structure Of Seabream Antiquitin And Elucidation
Of Its Substrate Specificity
pdb|2JG7|C Chain C, Crystal Structure Of Seabream Antiquitin And Elucidation
Of Its Substrate Specificity
pdb|2JG7|D Chain D, Crystal Structure Of Seabream Antiquitin And Elucidation
Of Its Substrate Specificity
pdb|2JG7|E Chain E, Crystal Structure Of Seabream Antiquitin And Elucidation
Of Its Substrate Specificity
pdb|2JG7|F Chain F, Crystal Structure Of Seabream Antiquitin And Elucidation
Of Its Substrate Specificity
pdb|2JG7|G Chain G, Crystal Structure Of Seabream Antiquitin And Elucidation
Of Its Substrate Specificity
pdb|2JG7|H Chain H, Crystal Structure Of Seabream Antiquitin And Elucidation
Of Its Substrate Specificity
Length = 510
Score = 137 bits (345), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 126/477 (26%), Positives = 197/477 (41%), Gaps = 82/477 (17%)
Query: 71 NGQFVDSASGKTFPTLDPRTGDVITHVAEGEAEDVNRAVSAARKAFDEGPWPRMTAYERS 130
NG + SG+ + P + I V + + V R+A+ W + A +R
Sbjct: 27 NGSW--GGSGEVITSYCPANNEPIARVTQATLAEYEETVQKTREAWKM--WADIPAPKRG 82
Query: 131 KIILRFADLLERHNDEIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADKIQGLTAP 190
+I+ + D L + + +L + + GK + + EV + Y G + I G P
Sbjct: 83 EIVRQIGDALRKKIKVLGSLVSLEMGKIYVEGV-GEVQEYVDVCDYAVGLSRMIGGPVLP 141
Query: 191 ADGPYH--------------VQTLHEPIGVAGVLNIV----------------------- 213
++ P H + + P+ V G N +
Sbjct: 142 SERPGHALIEQWNPVGLVGIITAFNFPVAVYGWNNAIALTCGNVCLWKGAPTTPLTSVAV 201
Query: 214 --------------------SGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLAAKSN 253
+ G G A+A VD L+FTGST GK+V + +
Sbjct: 202 TKIVAEVLEQNNLPGAICSMTCGGADIGTAMAKDERVDLLSFTGSTHVGKMVAMMVQERF 261
Query: 254 LKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFVEK 313
+ + LELGG + IV EDAD++ A +A GQ C R +HESV+D VE+
Sbjct: 262 GRKL-LELGGNNAIIVFEDADLNLVVPSAVFASVGTAGQRCTTTRRLMLHESVHDAVVER 320
Query: 314 ANALAMKRV-VGDPFKGGIQQGPQIDSEQFEKILKYIRSGVDGGAKLETGGERLGAKGYY 372
A A K+V +GDP+ GP + ++ L I G L GG+ + G Y
Sbjct: 321 I-AKAYKQVRIGDPWDPSTLYGPLHTKQAVDQYLAAIEQAKQQGGTLVCGGKVMDRPGNY 379
Query: 373 IKPTVFTGVKDDMLIAKDEIFGPVQSILKYKDLDEVIQRSNASQYGLAAGVFTHNLDTAN 432
++PT+ TG+ D I E F P+ +LK+K +E +N Q GL++ +FT +L
Sbjct: 380 VEPTIITGLAHDAPIVHTETFVPILYVLKFKTEEEAFAWNNEVQQGLSSSIFTKDLG--- 436
Query: 433 TLMRALR-VGSVWINCFDVFDAAIP---------FGGYKQSGQGREKGSYSLSNYLQ 479
R R +G +C + + IP FGG K +G GRE GS S Y++
Sbjct: 437 ---RVFRWLGPKGSDC-GIVNVNIPTSGAEIGGAFGGEKHTGGGRESGSDSWKQYMR 489
>pdb|3JU8|A Chain A, Crystal Structure Of Succinylglutamic Semialdehyde
Dehydrogenase From Pseudomonas Aeruginosa.
pdb|3JU8|B Chain B, Crystal Structure Of Succinylglutamic Semialdehyde
Dehydrogenase From Pseudomonas Aeruginosa
Length = 490
Score = 129 bits (323), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 130/461 (28%), Positives = 199/461 (43%), Gaps = 76/461 (16%)
Query: 70 INGQFVDSASGKTFPTLDPRTGDVITHVAEGEAEDVNRAVSAARKAFDEGPWPRMTAYER 129
I GQ++ + G+T +LDP V+ +A V+ AV AAR+AF W R +R
Sbjct: 10 IAGQWL-AGQGETLESLDPVGQGVVWSGRGADATQVDAAVCAAREAFPA--WARRPLEQR 66
Query: 130 SKIILRFADLLERHNDEIAALETWDNGKPFEQSAQ------TEVPMTTRLFRYYAG---- 179
+++ RFA L+ DE+A + + GKP +SA +V ++ + FR G
Sbjct: 67 IELLERFAATLKSRADELARVIGEETGKPLWESATEVTSXVNKVAISVQAFRERTGEKSG 126
Query: 180 -WAD-------KIQGLTA---PADGPYHVQTLH-------------EPIGV--------- 206
AD K G+ A P + P H+ H +P +
Sbjct: 127 PLADATAVLRHKPHGVVAVFGPYNFPGHLPNGHIVPALLAGNCVVFKPSELTPKVAELTL 186
Query: 207 ---------AGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLAAKSNLKPV 257
AGVLN+V G G G ALA+H +D L FTGS+ TG ++ K +
Sbjct: 187 KAWIQAGLPAGVLNLVQG-GRETGVALAAHRGLDGLFFTGSSRTGNLLHSQFGGQPQKIL 245
Query: 258 TLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVY-DQFVEKANA 316
LE GG +P +V E AD+D A + F + GQ C R V + + D + + A
Sbjct: 246 ALEXGGNNPLVVEEVADLDAAVYTIIQSAFISAGQRCTCARRLLVPQGAWGDALLARLVA 305
Query: 317 LAMKRVVGD------PFKGGIQQGPQIDSEQFEKILKYIRSGVDGGAKLETGGERLGAKG 370
++ VG PF G + I E +LK + GA+ +
Sbjct: 306 VSATLRVGRFDEQPAPFXGAV-----ISLSAAEHLLKAQEHLIGKGAQPLLAXTQPIDGA 360
Query: 371 YYIKPTVFTGVKDDMLIAK---DEIFGPVQSILKYKDLDEVIQRSNASQYGLAAGVFTHN 427
+ P G+ D +A+ +E FGP+ +++Y D I+ +NA+QYGLAAG+ + +
Sbjct: 361 ALLTP----GILDVSAVAERPDEEFFGPLLQVIRYSDFAAAIREANATQYGLAAGLLSDS 416
Query: 428 LDTANTLMRALRVGSV-WINCFDVFDAAIPFGGYKQSGQGR 467
+ + R G V W ++ PFGG SG R
Sbjct: 417 RERFEQFLVESRAGIVNWNKQLTGAASSAPFGGIGASGNHR 457
>pdb|2J6L|A Chain A, Structure Of Aminoadipate-Semialdehyde Dehydrogenase
pdb|2J6L|B Chain B, Structure Of Aminoadipate-Semialdehyde Dehydrogenase
pdb|2J6L|C Chain C, Structure Of Aminoadipate-Semialdehyde Dehydrogenase
pdb|2J6L|D Chain D, Structure Of Aminoadipate-Semialdehyde Dehydrogenase
pdb|2J6L|E Chain E, Structure Of Aminoadipate-Semialdehyde Dehydrogenase
pdb|2J6L|F Chain F, Structure Of Aminoadipate-Semialdehyde Dehydrogenase
pdb|2J6L|G Chain G, Structure Of Aminoadipate-Semialdehyde Dehydrogenase
pdb|2J6L|H Chain H, Structure Of Aminoadipate-Semialdehyde Dehydrogenase
Length = 500
Score = 128 bits (322), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 115/467 (24%), Positives = 184/467 (39%), Gaps = 78/467 (16%)
Query: 80 GKTFPTLDPRTGDVITHVAEGEAEDVNRAVSAARKAFDEGPWPRMTAYERSKIILRFADL 139
G+ T P + I V + D V AR+A+ W + A +R +I+ + D
Sbjct: 36 GEVITTYCPANNEPIARVRQASVADYEETVKKAREAWK--IWADIPAPKRGEIVRQIGDA 93
Query: 140 LERHNDEIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADKIQGLTAPADGPYH--- 196
L + +L + + GK + EV + Y G + I G P++ H
Sbjct: 94 LREKIQVLGSLVSLEMGKILVEGV-GEVQEYVDICDYAVGLSRMIGGPILPSERSGHALI 152
Query: 197 -----------VQTLHEPIGVAGVLNIVSGY----------------------------- 216
+ + P+ V G N ++
Sbjct: 153 EQWNPVGLVGIITAFNFPVAVYGWNNAIAMICGNVCLWKGAPTTSLISVAVTKIIAKVLE 212
Query: 217 --------------GPTAGAALASHMEVDKLAFTGSTTTGKIVLQLAAKSNLKPVTLELG 262
G G A+A V+ L+FTGST GK V L + LELG
Sbjct: 213 DNKLPGAICSLTCGGADIGTAMAKDERVNLLSFTGSTQVGKQV-GLMVQERFGRSLLELG 271
Query: 263 GKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMKRV 322
G + I EDAD+ A +A GQ C R F+HES++D+ V + +
Sbjct: 272 GNNAIIAFEDADLSLVVPSALFAAVGTAGQRCTTARRLFIHESIHDEVVNRLKKAYAQIR 331
Query: 323 VGDPFKGGIQQGPQIDSEQFEKILKYIRSGVDGGAKLETGGERLGAKGYYIKPTVFTGVK 382
VG+P+ + GP + L + G + GG+ + G Y++PT+ TG+
Sbjct: 332 VGNPWDPNVLYGPLHTKQAVSMFLGAVEEAKKEGGTVVYGGKVMDRPGNYVEPTIVTGLG 391
Query: 383 DDMLIAKDEIFGPVQSILKYKDLDEVIQRSNASQYGLAAGVFTHNLDTANTLMRALR-VG 441
D IA E F P+ + K+++ +EV +N + GL++ +FT +L R R +G
Sbjct: 392 HDASIAHTETFAPILYVFKFQNEEEVFAWNNEVKQGLSSSIFTKDLG------RIFRWLG 445
Query: 442 SVWINCFDVFDAAIP---------FGGYKQSGQGREKGSYSLSNYLQ 479
+C + + IP FGG K +G GRE GS + Y++
Sbjct: 446 PKGSDC-GIVNVNIPTSGAEIGGAFGGEKHTGGGRESGSDAWKQYMR 491
>pdb|4H7N|A Chain A, The Structure Of Putative Aldehyde Dehydrogenase Puta From
Anabaena Variabilis.
pdb|4H7N|B Chain B, The Structure Of Putative Aldehyde Dehydrogenase Puta From
Anabaena Variabilis.
pdb|4H7N|C Chain C, The Structure Of Putative Aldehyde Dehydrogenase Puta From
Anabaena Variabilis.
pdb|4H7N|D Chain D, The Structure Of Putative Aldehyde Dehydrogenase Puta From
Anabaena Variabilis
Length = 474
Score = 127 bits (318), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 98/295 (33%), Positives = 147/295 (49%), Gaps = 17/295 (5%)
Query: 209 VLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLAAKSNLKPVTLELGGKSPFI 268
VL V G G T GA L ++ VD + FTGS TG+ V + AA+ + P LELGGK P I
Sbjct: 185 VLIFVEGGGET-GANLINY--VDFVCFTGSVATGREVAETAARRFI-PAYLELGGKDPAI 240
Query: 269 VCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMKRVVGDPFK 328
V E A+++ A + N GQ C + R +V ES +++F + A A + + P
Sbjct: 241 VLESANLELATSAILWGAVVNTGQSCLSIERIYVAESKFEEFYHQLIAKAHRLQLAYPLV 300
Query: 329 GGIQQGPQIDSEQFEKILKYIRSGVDGGAKLETGG--ERLGAKGYYIKPTVFTGVKDDML 386
GP I +Q I +I V+ GA + GG E LG G++ +PTV T V
Sbjct: 301 EDGAIGPIIAEKQAGIINDHILDAVEKGAVIHCGGKVEELGG-GWWCRPTVXTNVNHSXK 359
Query: 387 IAKDEIFGPVQSILKYKDLDEVIQRSNASQYGLAAGVFTHNLDTANTLMRALRVGSVWIN 446
+ +E FGP+ + + D++E + +N + YGL+A VF + D A + R L G++ IN
Sbjct: 360 VXTEETFGPIXPVXPFPDVEEAVYLANDTIYGLSAAVFAGSEDEALKVARQLNAGAISIN 419
Query: 447 CFDVFDAAIPFGGYKQ----SGQGREK-GSYSLSNYLQVKAVV---TALKNPAWL 493
D A G K SG G + G+ L +L+ +A + + +P W
Sbjct: 420 --DAALTAXXHEGEKNAFNFSGLGGSRVGAAGLKRFLRKQAFLIKTNSTSDPWWF 472
>pdb|3SZA|A Chain A, Crystal Structure Of Human Aldh3a1 - Apo Form
pdb|3SZA|B Chain B, Crystal Structure Of Human Aldh3a1 - Apo Form
pdb|3SZB|A Chain A, Crystal Structure Of Human Aldh3a1 Modified With The
Beta-Elimination Product Of Aldi-1; 1-Phenyl-
2-Propen-1-One
pdb|3SZB|B Chain B, Crystal Structure Of Human Aldh3a1 Modified With The
Beta-Elimination Product Of Aldi-1; 1-Phenyl-
2-Propen-1-One
Length = 469
Score = 123 bits (309), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 84/249 (33%), Positives = 121/249 (48%), Gaps = 10/249 (4%)
Query: 231 DKLAFTGSTTTGKIVLQLAAKSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQ 290
D + +TGST GKI++ AAK +L PVTLELGGKSP V ++ D+D A + F N
Sbjct: 198 DHILYTGSTGVGKIIMTAAAK-HLTPVTLELGGKSPCYVDKNCDLDVACRRIAWGKFMNS 256
Query: 291 GQCCCAGSRTFVHESVYDQFVEKANALAMKRVVGDPFKGGIQQGPQIDSEQFEKILKYIR 350
GQ C A S+ +Q VEK ++K G+ K G I + F++++
Sbjct: 257 GQTCVAPDYILCDPSIQNQIVEKLKK-SLKEFYGEDAKKSRDYGRIISARHFQRVM---- 311
Query: 351 SGVDGGAKLETGGERLGAKGYYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYKDLDEVIQ 410
G+ G K+ GG A YI PT+ T V + ++EIFGPV I+ + L+E IQ
Sbjct: 312 -GLIEGQKVAYGGTG-DAATRYIAPTILTDVDPQSPVMQEEIFGPVLPIVCVRSLEEAIQ 369
Query: 411 RSNASQYGLAAGVFTHNLDTANTLMRALRVGSVWIN--CFDVFDAAIPFGGYKQSGQGRE 468
N + LA +F+ N ++ G V N + ++PFGG SG G
Sbjct: 370 FINQREKPLALYMFSSNDKVIKKMIAETSSGGVAANDVIVHITLHSLPFGGVGNSGMGSY 429
Query: 469 KGSYSLSNY 477
G S +
Sbjct: 430 HGKKSFETF 438
>pdb|1AD3|A Chain A, Class 3 Aldehyde Dehydrogenase Complex With Nicotinamide-
Adenine-Dinucleotide
pdb|1AD3|B Chain B, Class 3 Aldehyde Dehydrogenase Complex With Nicotinamide-
Adenine-Dinucleotide
Length = 452
Score = 123 bits (308), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 87/262 (33%), Positives = 124/262 (47%), Gaps = 11/262 (4%)
Query: 231 DKLAFTGSTTTGKIVLQLAAKSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQ 290
D + +TGST GKIV+ AAK +L PVTLELGGKSP V +D D+D A + F N
Sbjct: 181 DHIMYTGSTAVGKIVMAAAAK-HLTPVTLELGGKSPCYVDKDCDLDVACRRIAWGKFMNS 239
Query: 291 GQCCCAGSRTFVHESVYDQFVEKANALAMKRVVGDPFKGGIQQGPQIDSEQFEKILKYIR 350
GQ C A S+ +Q VEK ++K G+ K G I+ F+++
Sbjct: 240 GQTCVAPDYILCDPSIQNQIVEKLKK-SLKDFYGEDAKQSRDYGRIINDRHFQRV----- 293
Query: 351 SGVDGGAKLETGGERLGAKGYYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYKDLDEVIQ 410
G+ K+ GG YI PT+ V + ++EIFGPV I+ + L+E IQ
Sbjct: 294 KGLIDNQKVAHGGT-WDQSSRYIAPTILVDVDPQSPVMQEEIFGPVMPIVCVRSLEEAIQ 352
Query: 411 RSNASQYGLAAGVFTHNLDTANTLMRALRVGSVWIN--CFDVFDAAIPFGGYKQSGQGRE 468
N + LA VF++N ++ G V N + +PFGG SG G
Sbjct: 353 FINQREKPLALYVFSNNEKVIKKMIAETSSGGVTANDVIVHITVPTLPFGGVGNSGMGAY 412
Query: 469 KGSYSLSNYLQVKA-VVTALKN 489
G S + ++ +V +L N
Sbjct: 413 HGKKSFETFSHRRSCLVKSLLN 434
>pdb|3LV1|A Chain A, Benzaldehyde Dehydrogenase, A Class 3 Aldehyde
Dehydrogenase, With Bound Nadp+
pdb|3LV1|B Chain B, Benzaldehyde Dehydrogenase, A Class 3 Aldehyde
Dehydrogenase, With Bound Nadp+
pdb|3LV1|C Chain C, Benzaldehyde Dehydrogenase, A Class 3 Aldehyde
Dehydrogenase, With Bound Nadp+
pdb|3LV1|D Chain D, Benzaldehyde Dehydrogenase, A Class 3 Aldehyde
Dehydrogenase, With Bound Nadp+
Length = 457
Score = 113 bits (283), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 78/259 (30%), Positives = 122/259 (47%), Gaps = 13/259 (5%)
Query: 228 MEVDKLAFTGSTTTGKIVLQLAAKSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALF 287
+ D + FTGS GK+V+Q AAK +L PV LELGGK P IV DAD+D+ + F
Sbjct: 205 LPFDFIFFTGSPNVGKVVMQAAAK-HLTPVVLELGGKCPLIVLPDADLDQTVNQLMFGKF 263
Query: 288 FNQGQCCCAGSRTFVHESVYDQFVEKANALAMKRVVGDPFKGGIQQGPQIDSEQFEKILK 347
N GQ C A +VH SV D +E+ + G + Q+ ++ +L+
Sbjct: 264 INSGQTCIAPDYLYVHYSVKDALLERLVERVKTELPEINSTGKLVTERQV--QRLVSLLE 321
Query: 348 YIRSGVDGGAKLETGGERLGAKGYYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYKDLDE 407
+ V G++ + L A TV GV+ + + +E+FGP+ +L++ +
Sbjct: 322 ATQGQVLVGSQADVSKRALSA-------TVVDGVEWNDPLMSEELFGPILPVLEFDSVRT 374
Query: 408 VIQRSNASQ-YGLAAGVFTHNLDTANTLMRALRVGSVWIN--CFDVFDAAIPFGGYKQSG 464
I + N LA VF ++D A ++ ++ G +N F +PFGG SG
Sbjct: 375 AIDQVNKHHPKPLAVYVFGKDMDVAKGIINQIQSGDAQVNGVMLHAFSPYLPFGGIGASG 434
Query: 465 QGREKGSYSLSNYLQVKAV 483
G G +S + K+V
Sbjct: 435 MGEYHGHFSYLTFTHKKSV 453
>pdb|3LNS|A Chain A, Benzaldehyde Dehydrogenase, A Class 3 Aldehyde
Dehydrogenase, With Bound Nadp+ And Benzoate Adduct
pdb|3LNS|B Chain B, Benzaldehyde Dehydrogenase, A Class 3 Aldehyde
Dehydrogenase, With Bound Nadp+ And Benzoate Adduct
pdb|3LNS|C Chain C, Benzaldehyde Dehydrogenase, A Class 3 Aldehyde
Dehydrogenase, With Bound Nadp+ And Benzoate Adduct
pdb|3LNS|D Chain D, Benzaldehyde Dehydrogenase, A Class 3 Aldehyde
Dehydrogenase, With Bound Nadp+ And Benzoate Adduct
Length = 457
Score = 109 bits (272), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 77/259 (29%), Positives = 121/259 (46%), Gaps = 13/259 (5%)
Query: 228 MEVDKLAFTGSTTTGKIVLQLAAKSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALF 287
+ D + FTGS GK+V+Q AAK +L PV LELGGK P IV DAD+D+ + F
Sbjct: 205 LPFDFIFFTGSPNVGKVVMQAAAK-HLTPVVLELGGKCPLIVLPDADLDQTVNQLMFGKF 263
Query: 288 FNQGQCCCAGSRTFVHESVYDQFVEKANALAMKRVVGDPFKGGIQQGPQIDSEQFEKILK 347
N GQ A +VH SV D +E+ + G + Q+ ++ +L+
Sbjct: 264 INSGQTXIAPDYLYVHYSVKDALLERLVERVKTELPEINSTGKLVTERQV--QRLVSLLE 321
Query: 348 YIRSGVDGGAKLETGGERLGAKGYYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYKDLDE 407
+ V G++ + L A TV GV+ + + +E+FGP+ +L++ +
Sbjct: 322 ATQGQVLVGSQADVSKRALSA-------TVVDGVEWNDPLMSEELFGPILPVLEFDSVRT 374
Query: 408 VIQRSNASQ-YGLAAGVFTHNLDTANTLMRALRVGSVWIN--CFDVFDAAIPFGGYKQSG 464
I + N LA VF ++D A ++ ++ G +N F +PFGG SG
Sbjct: 375 AIDQVNKHHPKPLAVYVFGKDMDVAKGIINQIQSGDAQVNGVMLHAFSPYLPFGGIGASG 434
Query: 465 QGREKGSYSLSNYLQVKAV 483
G G +S + K+V
Sbjct: 435 MGEYHGHFSYLTFTHKKSV 453
>pdb|3HAZ|A Chain A, Crystal Structure Of Bifunctional Proline Utilization A
(Puta) Protein
pdb|3HAZ|B Chain B, Crystal Structure Of Bifunctional Proline Utilization A
(Puta) Protein
Length = 1001
Score = 103 bits (258), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 83/281 (29%), Positives = 140/281 (49%), Gaps = 14/281 (4%)
Query: 197 VQTLHEPIGVAGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGK-IVLQLAAKSN-L 254
V LHE L +V+G G GAAL +H ++ + FTGST + I LAAK +
Sbjct: 696 VALLHEAGIPKSALYLVTGDG-RIGAALTAHPDIAGVVFTGSTEVARSINRALAAKDGPI 754
Query: 255 KPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFVEKA 314
P+ E GG + I A ++ A+ + F + GQ C A FV E V D+ +E
Sbjct: 755 VPLIAETGGINAMIADATALPEQVADDVVTSAFRSAGQRCSALRLLFVQEDVADRMIEMV 814
Query: 315 NALAMKRVVGDPFKGGIQQGPQIDSEQFEKILKYIRSGVDGGAKLETGGERLGAKGYYIK 374
A + +GDP GP ID E +++ +I + + A+L G +G ++
Sbjct: 815 AGAARELKIGDPSDVATHVGPVIDVEAKQRLDAHI-ARMKTEARLHFAGP--APEGCFVA 871
Query: 375 PTVFTGVKDDMLIAKDEIFGPVQSILKYK--DLDEVIQRSNASQYGLAAGVFTHNLDTAN 432
P +F + L +E+FGP+ +++Y+ +L+ V++ + YGL GV + D+
Sbjct: 872 PHIFELTEAGQL--TEEVFGPILHVVRYRPENLERVLRAIERTGYGLTLGVHSRIDDSIE 929
Query: 433 TLMRALRVGSVWINCFDVFDAAI---PFGGYKQSGQGREKG 470
++ ++VG++++N ++ A + PFGG SG G + G
Sbjct: 930 AIIDRVQVGNIYVNR-NMIGAVVGVQPFGGNGLSGTGPKAG 969
Score = 28.9 bits (63), Expect = 6.6, Method: Compositional matrix adjust.
Identities = 22/74 (29%), Positives = 31/74 (41%), Gaps = 1/74 (1%)
Query: 121 WPRMTAYERSKIILRFADLLERHNDEIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGW 180
W R A R+ + + A LLE + AL + GK + A +E+ RYYA
Sbjct: 566 WSRTPAGIRAAALEQAAHLLESRSAHFIALLQREGGKTLD-DALSELREAADFCRYYAAQ 624
Query: 181 ADKIQGLTAPADGP 194
K+ G GP
Sbjct: 625 GRKLFGSETAMPGP 638
>pdb|4E4G|A Chain A, Crystal Structure Of Putative Methylmalonate-Semialdehyde
Dehydrogenase From Sinorhizobium Meliloti 1021
pdb|4E4G|B Chain B, Crystal Structure Of Putative Methylmalonate-Semialdehyde
Dehydrogenase From Sinorhizobium Meliloti 1021
pdb|4E4G|C Chain C, Crystal Structure Of Putative Methylmalonate-Semialdehyde
Dehydrogenase From Sinorhizobium Meliloti 1021
pdb|4E4G|D Chain D, Crystal Structure Of Putative Methylmalonate-Semialdehyde
Dehydrogenase From Sinorhizobium Meliloti 1021
pdb|4E4G|E Chain E, Crystal Structure Of Putative Methylmalonate-Semialdehyde
Dehydrogenase From Sinorhizobium Meliloti 1021
pdb|4E4G|F Chain F, Crystal Structure Of Putative Methylmalonate-Semialdehyde
Dehydrogenase From Sinorhizobium Meliloti 1021
pdb|4E4G|G Chain G, Crystal Structure Of Putative Methylmalonate-Semialdehyde
Dehydrogenase From Sinorhizobium Meliloti 1021
pdb|4E4G|H Chain H, Crystal Structure Of Putative Methylmalonate-Semialdehyde
Dehydrogenase From Sinorhizobium Meliloti 1021
Length = 521
Score = 100 bits (249), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 83/287 (28%), Positives = 135/287 (47%), Gaps = 10/287 (3%)
Query: 207 AGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLAAKSNLKPVTLELGGKSP 266
AG+LN+V+G A A+ +H ++ ++F GST + V AA N K G K+
Sbjct: 219 AGILNVVNG-DKGAVDAILTHPDIAAVSFVGSTPIARYVYGTAA-XNGKRAQCFGGAKNH 276
Query: 267 FIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTF-VHESVYDQFVEKANALAMKRVVGD 325
I+ DAD+D+AA A + + G+ C A S V E ++ ++K +G
Sbjct: 277 XIIXPDADLDQAANALIGAGYGSAGERCXAISVAVPVGEETANRLIDKLVPXVESLRIGP 336
Query: 326 PFKGGIQQGPQIDSEQFEKILKYIRSGVDGGAKLETGGERLGAKGY----YIKPTVFTGV 381
GP + E ++I I SG++ GAKL G +GY +I +F V
Sbjct: 337 YTDEKADXGPVVTKEAEQRIRSLIDSGIEQGAKLVVDGRDFKLQGYENGHFIGGCLFDDV 396
Query: 382 KDDMLIAKDEIFGPVQSILKYKDLDEVIQRSNASQYGLAAGVFTHNLDTANTLMRALRVG 441
D I K EIFGPV S+++ ++ +E + +YG ++T + D A + +G
Sbjct: 397 TPDXDIYKTEIFGPVLSVVRARNYEEALSLPXKHEYGNGVAIYTRDGDAARDFASRINIG 456
Query: 442 SVWINC-FDVFDAAIPFGGYKQSGQG--REKGSYSLSNYLQVKAVVT 485
V +N V A FGG+K S G + G+ S+ + + K + +
Sbjct: 457 XVGVNVPIPVPLAYHSFGGWKSSSFGDLNQHGTDSIKFWTRTKTITS 503
>pdb|3V9J|A Chain A, Crystal Structure Of Mouse 1-Pyrroline-5-Carboxylate
Dehydrogenase Complexed With Sulfate Ion
pdb|3V9J|B Chain B, Crystal Structure Of Mouse 1-Pyrroline-5-Carboxylate
Dehydrogenase Complexed With Sulfate Ion
pdb|3V9K|A Chain A, Crystal Structure Of Mouse 1-Pyrroline-5-Carboxylate
Dehydrogenase Complexed With The Product Glutamate
pdb|3V9K|B Chain B, Crystal Structure Of Mouse 1-Pyrroline-5-Carboxylate
Dehydrogenase Complexed With The Product Glutamate
pdb|3V9L|A Chain A, Crystal Structure Of Mouse 1-Pyrroline-5-Carboxylate
Dehydrogenase Complexed With Nad+
pdb|3V9L|B Chain B, Crystal Structure Of Mouse 1-Pyrroline-5-Carboxylate
Dehydrogenase Complexed With Nad+
pdb|4E3X|A Chain A, Crystal Structure Of Mus Musculus
1-Pyrroline-5-Carboxylate Dehydrogenase Cryoprotected In
Proline
pdb|4E3X|B Chain B, Crystal Structure Of Mus Musculus
1-Pyrroline-5-Carboxylate Dehydrogenase Cryoprotected In
Proline
Length = 563
Score = 86.3 bits (212), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 79/278 (28%), Positives = 125/278 (44%), Gaps = 18/278 (6%)
Query: 209 VLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLAAKSNLKPVTL-----ELGG 263
++ V GPT G + S + + FTGS T K + + A++ + T E GG
Sbjct: 258 IIQFVPADGPTFGDTVTSSEHLCGINFTGSVPTFKHLWRQVAQNLDRFRTFPRLAGECGG 317
Query: 264 KSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMKRVV 323
K+ V ADVD + F GQ C A SR +V +S++ Q + + V
Sbjct: 318 KNFHFVHSSADVDSVVSGTLRSAFEYGGQKCSACSRLYVPKSLWPQIKGRLLEEHSRIKV 377
Query: 324 GDPFKG-GIQQGPQIDSEQFEKILKYIRSGVDGGA-KLETGGERLGAKGYYIKPTVFTGV 381
GDP + G ID++ F +I K++ + + GG+ + GYY++P +
Sbjct: 378 GDPAEDFGTFFSAVIDAKAFARIKKWLEHARSSPSLSILAGGQCNESVGYYVEPCIIESK 437
Query: 382 KDDMLIAKDEIFGPVQSILKYKD--LDEVIQRSNA-SQYGLAAGVFTHNLDTANTLMRAL 438
I K+EIFGPV ++ Y D E ++ ++ + YGL VF + R L
Sbjct: 438 DPQEPIMKEEIFGPVLTVYVYPDDKYRETLKLVDSTTSYGLTGAVFAQDKAIVQEATRML 497
Query: 439 R--VGSVWINCFDVFDAAI----PFGGYKQSGQGREKG 470
R G+ +IN D ++ PFGG + SG + G
Sbjct: 498 RNAAGNFYIN--DKSTGSVVGQQPFGGARASGTNDKPG 533
>pdb|3V9G|A Chain A, Crystal Structure Of Human 1-Pyrroline-5-Carboxylate
Dehydrogenase
pdb|3V9G|B Chain B, Crystal Structure Of Human 1-Pyrroline-5-Carboxylate
Dehydrogenase
pdb|3V9G|C Chain C, Crystal Structure Of Human 1-Pyrroline-5-Carboxylate
Dehydrogenase
pdb|3V9G|D Chain D, Crystal Structure Of Human 1-Pyrroline-5-Carboxylate
Dehydrogenase
Length = 566
Score = 86.3 bits (212), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 78/278 (28%), Positives = 124/278 (44%), Gaps = 18/278 (6%)
Query: 209 VLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLAAKS-----NLKPVTLELGG 263
++ V GP G + S + + FTGS T K + + A++ + E GG
Sbjct: 261 IIQFVPADGPLFGDTVTSSEHLCGINFTGSVPTFKHLWKQVAQNLDRFHTFPRLAGECGG 320
Query: 264 KSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMKRVV 323
K+ V ADV+ + F GQ C A SR +V S++ Q + + V
Sbjct: 321 KNFHFVHRSADVESVVSGTLRSAFEYGGQKCSACSRLYVPHSLWPQIKGRLLEEHSRIKV 380
Query: 324 GDPFKG-GIQQGPQIDSEQFEKILKYIRSGVDGGA-KLETGGERLGAKGYYIKPTVFTGV 381
GDP + G ID++ F +I K++ + + GG+ + GY+++P +
Sbjct: 381 GDPAEDFGTFFSAVIDAKSFARIKKWLEHARSSPSLTILAGGKCDDSVGYFVEPCIVESK 440
Query: 382 KDDMLIAKDEIFGPVQSILKYKD--LDEVIQRSNA-SQYGLAAGVFTHNLDTANTLMRAL 438
I K+EIFGPV S+ Y D E +Q ++ + YGL VF+ + D + L
Sbjct: 441 DPQEPIMKEEIFGPVLSVYVYPDDKYKETLQLVDSTTSYGLTGAVFSQDKDVVQEATKVL 500
Query: 439 R--VGSVWINCFDVFDAAI----PFGGYKQSGQGREKG 470
R G+ +IN D +I PFGG + SG + G
Sbjct: 501 RNAAGNFYIN--DKSTGSIVGQQPFGGARASGTNDKPG 536
>pdb|3V9H|A Chain A, Crystal Structure Of Human 1-Pyrroline-5-Carboxylate
Dehydrogenase Mutant S352a
pdb|3V9H|B Chain B, Crystal Structure Of Human 1-Pyrroline-5-Carboxylate
Dehydrogenase Mutant S352a
pdb|3V9H|C Chain C, Crystal Structure Of Human 1-Pyrroline-5-Carboxylate
Dehydrogenase Mutant S352a
pdb|3V9H|D Chain D, Crystal Structure Of Human 1-Pyrroline-5-Carboxylate
Dehydrogenase Mutant S352a
Length = 566
Score = 85.1 bits (209), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 77/278 (27%), Positives = 124/278 (44%), Gaps = 18/278 (6%)
Query: 209 VLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLAAKS-----NLKPVTLELGG 263
++ V GP G + S + + FTGS T K + + A++ + E GG
Sbjct: 261 IIQFVPADGPLFGDTVTSSEHLCGINFTGSVPTFKHLWKQVAQNLDRFHTFPRLAGECGG 320
Query: 264 KSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMKRVV 323
K+ V ADV+ + F GQ C A +R +V S++ Q + + V
Sbjct: 321 KNFHFVHRSADVESVVSGTLRSAFEYGGQKCSACARLYVPHSLWPQIKGRLLEEHSRIKV 380
Query: 324 GDPFKG-GIQQGPQIDSEQFEKILKYIRSGVDGGA-KLETGGERLGAKGYYIKPTVFTGV 381
GDP + G ID++ F +I K++ + + GG+ + GY+++P +
Sbjct: 381 GDPAEDFGTFFSAVIDAKSFARIKKWLEHARSSPSLTILAGGKCDDSVGYFVEPCIVESK 440
Query: 382 KDDMLIAKDEIFGPVQSILKYKD--LDEVIQRSNA-SQYGLAAGVFTHNLDTANTLMRAL 438
I K+EIFGPV S+ Y D E +Q ++ + YGL VF+ + D + L
Sbjct: 441 DPQEPIMKEEIFGPVLSVYVYPDDKYKETLQLVDSTTSYGLTGAVFSQDKDVVQEATKVL 500
Query: 439 R--VGSVWINCFDVFDAAI----PFGGYKQSGQGREKG 470
R G+ +IN D +I PFGG + SG + G
Sbjct: 501 RNAAGNFYIN--DKSTGSIVGQQPFGGARASGTNDKPG 536
>pdb|3V9I|A Chain A, Crystal Structure Of Human 1-Pyrroline-5-Carboxylate
Dehydrogenase Mutant S352l
pdb|3V9I|B Chain B, Crystal Structure Of Human 1-Pyrroline-5-Carboxylate
Dehydrogenase Mutant S352l
pdb|3V9I|C Chain C, Crystal Structure Of Human 1-Pyrroline-5-Carboxylate
Dehydrogenase Mutant S352l
pdb|3V9I|D Chain D, Crystal Structure Of Human 1-Pyrroline-5-Carboxylate
Dehydrogenase Mutant S352l
Length = 566
Score = 84.0 bits (206), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 77/278 (27%), Positives = 123/278 (44%), Gaps = 18/278 (6%)
Query: 209 VLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLAAKS-----NLKPVTLELGG 263
++ V GP G + S + + FTGS T K + + A++ + E GG
Sbjct: 261 IIQFVPADGPLFGDTVTSSEHLCGINFTGSVPTFKHLWKQVAQNLDRFHTFPRLAGECGG 320
Query: 264 KSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMKRVV 323
K+ V ADV+ + F GQ C A R +V S++ Q + + V
Sbjct: 321 KNFHFVHRSADVESVVSGTLRSAFEYGGQKCSACLRLYVPHSLWPQIKGRLLEEHSRIKV 380
Query: 324 GDPFKG-GIQQGPQIDSEQFEKILKYIRSGVDGGA-KLETGGERLGAKGYYIKPTVFTGV 381
GDP + G ID++ F +I K++ + + GG+ + GY+++P +
Sbjct: 381 GDPAEDFGTFFSAVIDAKSFARIKKWLEHARSSPSLTILAGGKCDDSVGYFVEPCIVESK 440
Query: 382 KDDMLIAKDEIFGPVQSILKYKD--LDEVIQRSNA-SQYGLAAGVFTHNLDTANTLMRAL 438
I K+EIFGPV S+ Y D E +Q ++ + YGL VF+ + D + L
Sbjct: 441 DPQEPIMKEEIFGPVLSVYVYPDDKYKETLQLVDSTTSYGLTGAVFSQDKDVVQEATKVL 500
Query: 439 R--VGSVWINCFDVFDAAI----PFGGYKQSGQGREKG 470
R G+ +IN D +I PFGG + SG + G
Sbjct: 501 RNAAGNFYIN--DKSTGSIVGQQPFGGARASGTNDKPG 536
>pdb|2Y53|A Chain A, Crystal Structure Of E257q Mutant Of The Box Pathway
Encoded Aldh From Burkholderia Xenovorans Lb400
pdb|2Y53|B Chain B, Crystal Structure Of E257q Mutant Of The Box Pathway
Encoded Aldh From Burkholderia Xenovorans Lb400
Length = 534
Score = 53.1 bits (126), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 58/221 (26%), Positives = 90/221 (40%), Gaps = 40/221 (18%)
Query: 208 GVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIV------LQLAAKSNLKPVTLEL 261
G L+I+ G ++ L D ++FTGS T + +Q A+ N++ +L
Sbjct: 210 GALSIICG---SSAGLLDQIRSFDVVSFTGSADTAATLRAHPAFVQRGARLNVQADSLNS 266
Query: 262 GGKSPFIVCEDADVDKAAELAHYALFFNQ---------GQCCCAGSRTFVHESVYDQFVE 312
I+C DA D A + LF + GQ C A R FV E+ + +E
Sbjct: 267 A-----ILCADATPDTPA----FDLFIKEVVREMTVKSGQKCTAIRRAFVPEAALEPVLE 317
Query: 313 KANALAMKRVVGDPFKGGIQQGPQIDSEQFEKILKYIRS-------GVDGGA-KLETGGE 364
A K VG+P ++ G + EQ+E +L I + D A L
Sbjct: 318 ALKAKLAKITVGNPRNDAVRMGSLVSREQYENVLAGIAALREEAVLAYDSSAVPLIDADA 377
Query: 365 RLGAKGYYIKPTVFTGVKDD--MLIAKDEIFGPVQSILKYK 403
+ A + P +F D L+ E+FGPV S+ Y+
Sbjct: 378 NIAA---CVAPHLFVVNDPDNATLLHDVEVFGPVASVAPYR 415
>pdb|2VRO|A Chain A, Crystal Structure Of Aldehyde Dehydrogenase From
Burkholderia Xenovorans Lb400
pdb|2VRO|B Chain B, Crystal Structure Of Aldehyde Dehydrogenase From
Burkholderia Xenovorans Lb400
Length = 532
Score = 52.8 bits (125), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 58/221 (26%), Positives = 90/221 (40%), Gaps = 40/221 (18%)
Query: 208 GVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIV------LQLAAKSNLKPVTLEL 261
G L+I+ G ++ L D ++FTGS T + +Q A+ N++ +L
Sbjct: 208 GALSIICG---SSAGLLDQIRSFDVVSFTGSADTAATLRAHPAFVQRGARLNVEADSLNS 264
Query: 262 GGKSPFIVCEDADVDKAAELAHYALFFNQ---------GQCCCAGSRTFVHESVYDQFVE 312
I+C DA D A + LF + GQ C A R FV E+ + +E
Sbjct: 265 A-----ILCADATPDTPA----FDLFIKEVVREMTVKSGQKCTAIRRAFVPEAALEPVLE 315
Query: 313 KANALAMKRVVGDPFKGGIQQGPQIDSEQFEKILKYIRS-------GVDGGA-KLETGGE 364
A K VG+P ++ G + EQ+E +L I + D A L
Sbjct: 316 ALKAKLAKITVGNPRNDAVRMGSLVSREQYENVLAGIAALREEAVLAYDSSAVPLIDADA 375
Query: 365 RLGAKGYYIKPTVFTGVKDD--MLIAKDEIFGPVQSILKYK 403
+ A + P +F D L+ E+FGPV S+ Y+
Sbjct: 376 NIAA---CVAPHLFVVNDPDNATLLHDVEVFGPVASVAPYR 413
>pdb|2Y51|A Chain A, Crystal Structure Of E167a Mutant Of The Box Pathway
Encoded Aldh From Burkholderia Xenovorans Lb400
pdb|2Y51|B Chain B, Crystal Structure Of E167a Mutant Of The Box Pathway
Encoded Aldh From Burkholderia Xenovorans Lb400
Length = 534
Score = 52.8 bits (125), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 58/221 (26%), Positives = 90/221 (40%), Gaps = 40/221 (18%)
Query: 208 GVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIV------LQLAAKSNLKPVTLEL 261
G L+I+ G ++ L D ++FTGS T + +Q A+ N++ +L
Sbjct: 210 GALSIICG---SSAGLLDQIRSFDVVSFTGSADTAATLRAHPAFVQRGARLNVEADSLNS 266
Query: 262 GGKSPFIVCEDADVDKAAELAHYALFFNQ---------GQCCCAGSRTFVHESVYDQFVE 312
I+C DA D A + LF + GQ C A R FV E+ + +E
Sbjct: 267 A-----ILCADATPDTPA----FDLFIKEVVREMTVKSGQKCTAIRRAFVPEAALEPVLE 317
Query: 313 KANALAMKRVVGDPFKGGIQQGPQIDSEQFEKILKYIRS-------GVDGGA-KLETGGE 364
A K VG+P ++ G + EQ+E +L I + D A L
Sbjct: 318 ALKAKLAKITVGNPRNDAVRMGSLVSREQYENVLAGIAALREEAVLAYDSSAVPLIDADA 377
Query: 365 RLGAKGYYIKPTVFTGVKDD--MLIAKDEIFGPVQSILKYK 403
+ A + P +F D L+ E+FGPV S+ Y+
Sbjct: 378 NIAA---CVAPHLFVVNDPDNATLLHDVEVFGPVASVAPYR 415
>pdb|2Y52|A Chain A, Crystal Structure Of E496a Mutant Of The Box Pathway
Encoded Aldh From Burkholderia Xenovorans Lb400
pdb|2Y52|B Chain B, Crystal Structure Of E496a Mutant Of The Box Pathway
Encoded Aldh From Burkholderia Xenovorans Lb400
Length = 534
Score = 52.8 bits (125), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 58/221 (26%), Positives = 90/221 (40%), Gaps = 40/221 (18%)
Query: 208 GVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIV------LQLAAKSNLKPVTLEL 261
G L+I+ G ++ L D ++FTGS T + +Q A+ N++ +L
Sbjct: 210 GALSIICG---SSAGLLDQIRSFDVVSFTGSADTAATLRAHPAFVQRGARLNVEADSLNS 266
Query: 262 GGKSPFIVCEDADVDKAAELAHYALFFNQ---------GQCCCAGSRTFVHESVYDQFVE 312
I+C DA D A + LF + GQ C A R FV E+ + +E
Sbjct: 267 A-----ILCADATPDTPA----FDLFIKEVVREMTVKSGQKCTAIRRAFVPEAALEPVLE 317
Query: 313 KANALAMKRVVGDPFKGGIQQGPQIDSEQFEKILKYIRS-------GVDGGA-KLETGGE 364
A K VG+P ++ G + EQ+E +L I + D A L
Sbjct: 318 ALKAKLAKITVGNPRNDAVRMGSLVSREQYENVLAGIAALREEAVLAYDSSAVPLIDADA 377
Query: 365 RLGAKGYYIKPTVFTGVKDD--MLIAKDEIFGPVQSILKYK 403
+ A + P +F D L+ E+FGPV S+ Y+
Sbjct: 378 NIAA---CVAPHLFVVNDPDNATLLHDVEVFGPVASVAPYR 415
>pdb|2Y5D|A Chain A, Crystal Structure Of C296a Mutant Of The Box Pathway
Encoded Aldh From Burkholderia Xenovorans Lb400
pdb|2Y5D|B Chain B, Crystal Structure Of C296a Mutant Of The Box Pathway
Encoded Aldh From Burkholderia Xenovorans Lb400
Length = 534
Score = 48.9 bits (115), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 57/221 (25%), Positives = 89/221 (40%), Gaps = 40/221 (18%)
Query: 208 GVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIV------LQLAAKSNLKPVTLEL 261
G L+I+ G ++ L D ++FTGS T + +Q A+ N++ +L
Sbjct: 210 GALSIICG---SSAGLLDQIRSFDVVSFTGSADTAATLRAHPAFVQRGARLNVEADSLNS 266
Query: 262 GGKSPFIVCEDADVDKAAELAHYALFFNQ---------GQCCCAGSRTFVHESVYDQFVE 312
I+C DA D A + LF + GQ A R FV E+ + +E
Sbjct: 267 A-----ILCADATPDTPA----FDLFIKEVVREMTVKSGQKATAIRRAFVPEAALEPVLE 317
Query: 313 KANALAMKRVVGDPFKGGIQQGPQIDSEQFEKILKYIRS-------GVDGGA-KLETGGE 364
A K VG+P ++ G + EQ+E +L I + D A L
Sbjct: 318 ALKAKLAKITVGNPRNDAVRMGSLVSREQYENVLAGIAALREEAVLAYDSSAVPLIDADA 377
Query: 365 RLGAKGYYIKPTVFTGVKDD--MLIAKDEIFGPVQSILKYK 403
+ A + P +F D L+ E+FGPV S+ Y+
Sbjct: 378 NIAA---CVAPHLFVVNDPDNATLLHDVEVFGPVASVAPYR 415
>pdb|1EYY|A Chain A, Crystal Structure Of The Nadp+ Dependent Aldehyde
Dehydrogenase From Vibrio Harveyi.
pdb|1EYY|B Chain B, Crystal Structure Of The Nadp+ Dependent Aldehyde
Dehydrogenase From Vibrio Harveyi.
pdb|1EYY|C Chain C, Crystal Structure Of The Nadp+ Dependent Aldehyde
Dehydrogenase From Vibrio Harveyi.
pdb|1EYY|D Chain D, Crystal Structure Of The Nadp+ Dependent Aldehyde
Dehydrogenase From Vibrio Harveyi.
pdb|1EZ0|A Chain A, Crystal Structure Of The Nadp+ Dependent Aldehyde
Dehydrogenase From Vibrio Harveyi.
pdb|1EZ0|B Chain B, Crystal Structure Of The Nadp+ Dependent Aldehyde
Dehydrogenase From Vibrio Harveyi.
pdb|1EZ0|C Chain C, Crystal Structure Of The Nadp+ Dependent Aldehyde
Dehydrogenase From Vibrio Harveyi.
pdb|1EZ0|D Chain D, Crystal Structure Of The Nadp+ Dependent Aldehyde
Dehydrogenase From Vibrio Harveyi
Length = 510
Score = 37.7 bits (86), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 39/151 (25%), Positives = 62/151 (41%), Gaps = 9/151 (5%)
Query: 208 GVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLA-AKSNLKPVTLELGGKSP 266
+ ++ G G AL SH E+ + FTGS G+ + LA + P ELG +P
Sbjct: 200 AIFTLLQGNQRALGQALVSHPEIKAVGFTGSVGGGRALFNLAHERPEPIPFYGELGAINP 259
Query: 267 FIVCEDADVDKA--AELAHYALFFNQGQCCCAGSRTFVHESVYDQ-FVEKANALAMKRVV 323
+ A KA A+ ++ GQ C F + Q F+E A +L ++
Sbjct: 260 TFIFPSAMRAKADLADQFVASMTMGCGQFCTKPGVVFALNTPETQAFIETAQSLIRQQSP 319
Query: 324 GDPFKGGIQQGPQIDSEQFEKILKYIRSGVD 354
GI+ DS Q + + + G+D
Sbjct: 320 STLLTPGIR-----DSYQSQVVSRGSDDGID 345
>pdb|3MY7|A Chain A, The Crystal Structure Of The Acdh Domain Of An Alcohol
Dehyd From Vibrio Parahaemolyticus To 2.25a
pdb|3MY7|B Chain B, The Crystal Structure Of The Acdh Domain Of An Alcohol
Dehyd From Vibrio Parahaemolyticus To 2.25a
pdb|3MY7|C Chain C, The Crystal Structure Of The Acdh Domain Of An Alcohol
Dehyd From Vibrio Parahaemolyticus To 2.25a
pdb|3MY7|D Chain D, The Crystal Structure Of The Acdh Domain Of An Alcohol
Dehyd From Vibrio Parahaemolyticus To 2.25a
Length = 452
Score = 34.7 bits (78), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 25/91 (27%), Positives = 39/91 (42%), Gaps = 5/91 (5%)
Query: 223 ALASHMEVDKLAFTGSTTTGKIVLQLAAKSNLKPVTLELGGKSPFIVCEDADVDKAAELA 282
AL H ++ + TG K AA S+ KP G P ++ E AD+ +A
Sbjct: 180 ALXKHDDIALILATGGPGXVK-----AAYSSGKPAIGVGAGNVPVVIDETADIKRAVASV 234
Query: 283 HYALFFNQGQCCCAGSRTFVHESVYDQFVEK 313
+ F+ G C + V + VYD+ E+
Sbjct: 235 LXSKTFDNGVVCASEQAVIVVDEVYDEVKER 265
>pdb|4J2U|A Chain A, Crystal Structure Of An Enoyl-coa Hydratase From
Rhodobacter Sphaeroides 2.4.1
pdb|4J2U|B Chain B, Crystal Structure Of An Enoyl-coa Hydratase From
Rhodobacter Sphaeroides 2.4.1
Length = 365
Score = 32.0 bits (71), Expect = 0.84, Method: Compositional matrix adjust.
Identities = 26/91 (28%), Positives = 39/91 (42%), Gaps = 6/91 (6%)
Query: 145 DEIAALETWDNGKPFEQSAQTEVP-MTTRLFRYYAGWADKIQGLTAPADGPYHVQTLH-- 201
D IAALE D P + + +P + + R +AG +I D P + L
Sbjct: 213 DLIAALEGGDLALPDHAAPEGRLPVLQDEIDRLFAGTLAEIPARLEATDTPLAAEALKAL 272
Query: 202 ---EPIGVAGVLNIVSGYGPTAGAALASHME 229
P+ +A L I+ GP+AG A +E
Sbjct: 273 RRSSPLALAATLEILQRLGPSAGIREALDLE 303
>pdb|3V4C|A Chain A, Crystal Structure Of A Semialdehyde Dehydrogenase From
Sinorhizobium Meliloti 1021
pdb|3V4C|B Chain B, Crystal Structure Of A Semialdehyde Dehydrogenase From
Sinorhizobium Meliloti 1021
Length = 528
Score = 30.4 bits (67), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 54/196 (27%), Positives = 76/196 (38%), Gaps = 26/196 (13%)
Query: 69 LINGQFVDSASGKTFPTLDPRTGDVITHVAEGEAEDVNRAVSAARKAFDEGPWP--RMTA 126
L+ G+++D A TF + P G A G E VNRA AA +AF W +
Sbjct: 33 LVAGEWLDGAG--TFASA-PAHGPA-HDFAVGTVELVNRACEAAEEAF----WTYGYSSR 84
Query: 127 YERSKIILRFADLLERHNDEIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADKIQG 186
ER+ + AD +E + I + + + G P E E TT R +A +K
Sbjct: 85 KERAAFLRAIADEIEARAEAITEIGSQETGLP-EARLNGERGRTTGQLRLFADHIEKGDY 143
Query: 187 L------------TAPADGPYHVQTLHEPIGVAGVLNIVSGYGPTAG---AALASHMEVD 231
L AP VQ P+ V G N + G AALA+ V
Sbjct: 144 LDRRVDAAXPERQPAPRQEIRLVQRPVGPVAVFGASNFPLAFSTAGGDTAAALAAGCPVV 203
Query: 232 KLAFTGSTTTGKIVLQ 247
+ TG+IV +
Sbjct: 204 VKGHSAHPGTGEIVAE 219
>pdb|4B93|B Chain B, Complex Of Vamp7 Cytoplasmic Domain With 2nd Ankyrin
Repeat Domain Of Varp
Length = 269
Score = 30.4 bits (67), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 32/125 (25%), Positives = 50/125 (40%), Gaps = 20/125 (16%)
Query: 193 GPYHVQTLHEPIGVAGVLNIVSGYGPTAGA-----ALASHMEVDKLAFTGSTTTGKIVLQ 247
P HV LH G A ++ ++ +G AGA A+ H+ + F V++
Sbjct: 88 SPLHVAALH---GRADLIPLLLKHGANAGARNADQAVPLHLACQQGHFQ--------VVK 136
Query: 248 LAAKSNLKPVTLELGGKSPFI-VCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESV 306
SN KP +L G +P I C + A L + N T +HE+V
Sbjct: 137 CLLDSNAKPNKKDLSGNTPLIYACSGGHHELVALLLQHGASINASN---NKGNTALHEAV 193
Query: 307 YDQFV 311
++ V
Sbjct: 194 IEKHV 198
>pdb|3IDE|A Chain A, Structure Of Ipnv Subviral Particle
pdb|3IDE|B Chain B, Structure Of Ipnv Subviral Particle
pdb|3IDE|C Chain C, Structure Of Ipnv Subviral Particle
pdb|3IDE|D Chain D, Structure Of Ipnv Subviral Particle
pdb|3IDE|E Chain E, Structure Of Ipnv Subviral Particle
Length = 442
Score = 28.9 bits (63), Expect = 6.2, Method: Compositional matrix adjust.
Identities = 23/83 (27%), Positives = 38/83 (45%), Gaps = 6/83 (7%)
Query: 411 RSNASQYGLAAGVFTHNLDTANTLMRALRVGSVWINCFDVFDAAIPFGGYKQSGQ---GR 467
R NA+Q GL F L+T+ L +A G + +D+ + +P G Y +G
Sbjct: 69 RWNANQTGLE---FDQWLETSQDLKKAFNYGRLISRKYDIQSSTLPAGLYALNGTLNAAT 125
Query: 468 EKGSYSLSNYLQVKAVVTALKNP 490
+GS S L ++++ NP
Sbjct: 126 FEGSLSEVESLTYNSLMSLTTNP 148
Database: pdbaa
Posted date: Mar 3, 2013 10:34 PM
Number of letters in database: 14,973,337
Number of sequences in database: 62,578
Lambda K H
0.318 0.135 0.399
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 14,318,980
Number of Sequences: 62578
Number of extensions: 605743
Number of successful extensions: 2019
Number of sequences better than 100.0: 101
Number of HSP's better than 100.0 without gapping: 94
Number of HSP's successfully gapped in prelim test: 7
Number of HSP's that attempted gapping in prelim test: 1638
Number of HSP's gapped (non-prelim): 172
length of query: 493
length of database: 14,973,337
effective HSP length: 103
effective length of query: 390
effective length of database: 8,527,803
effective search space: 3325843170
effective search space used: 3325843170
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 53 (25.0 bits)