Query 011130
Match_columns 493
No_of_seqs 240 out of 1621
Neff 8.4
Searched_HMMs 29240
Date Mon Mar 25 21:25:46 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/011130.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/011130hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 2wme_A BADH, betaine aldehyde 100.0 2.5E-96 9E-101 771.5 45.0 427 63-491 4-487 (490)
2 3ed6_A Betaine aldehyde dehydr 100.0 6.1E-91 2.1E-95 736.4 49.2 425 65-493 32-518 (520)
3 3rh9_A Succinate-semialdehyde 100.0 1.4E-90 4.9E-95 731.3 49.3 421 63-487 9-484 (506)
4 3ifg_A Succinate-semialdehyde 100.0 4.4E-91 1.5E-95 732.7 43.5 418 65-486 12-483 (484)
5 4f3x_A Putative aldehyde dehyd 100.0 1E-90 3.5E-95 731.7 42.8 420 64-487 24-497 (498)
6 3u4j_A NAD-dependent aldehyde 100.0 4.8E-90 1.7E-94 730.8 47.9 425 65-493 22-505 (528)
7 1bxs_A Aldehyde dehydrogenase; 100.0 9.8E-90 3.3E-94 724.8 48.9 422 66-488 21-497 (501)
8 3iwj_A Putative aminoaldehyde 100.0 1.3E-89 4.4E-94 725.4 49.0 429 63-493 5-497 (503)
9 2o2p_A Formyltetrahydrofolate 100.0 4.9E-90 1.7E-94 729.0 45.6 420 66-486 37-516 (517)
10 3ek1_A Aldehyde dehydrogenase; 100.0 2.8E-90 9.7E-95 728.7 41.7 417 65-487 32-502 (504)
11 3k2w_A Betaine-aldehyde dehydr 100.0 1.1E-89 3.7E-94 725.0 43.3 423 63-489 10-490 (497)
12 3b4w_A Aldehyde dehydrogenase; 100.0 2.8E-89 9.7E-94 720.8 44.8 420 65-487 8-482 (495)
13 1o04_A Aldehyde dehydrogenase, 100.0 3E-89 1E-93 720.8 43.6 421 67-488 21-496 (500)
14 3r31_A BADH, betaine aldehyde 100.0 1.3E-89 4.5E-94 725.7 40.8 416 63-487 12-488 (517)
15 3jz4_A Succinate-semialdehyde 100.0 9.5E-89 3.3E-93 716.1 46.4 418 65-486 9-480 (481)
16 3i44_A Aldehyde dehydrogenase; 100.0 8E-89 2.7E-93 717.1 45.7 427 53-485 12-496 (497)
17 1wnd_A Putative betaine aldehy 100.0 8.1E-89 2.8E-93 716.8 44.9 417 65-486 23-494 (495)
18 1a4s_A ALDH, betaine aldehyde 100.0 6.5E-89 2.2E-93 719.5 43.4 419 64-487 18-496 (503)
19 2ve5_A BADH, betaine aldehyde 100.0 1.2E-88 4.2E-93 717.3 45.3 424 62-488 3-484 (490)
20 2d4e_A 5-carboxymethyl-2-hydro 100.0 2E-88 7E-93 717.6 46.9 417 66-487 27-505 (515)
21 3prl_A NADP-dependent glyceral 100.0 1.4E-88 4.7E-93 716.7 44.2 415 65-489 11-485 (505)
22 2imp_A Lactaldehyde dehydrogen 100.0 2.9E-88 9.9E-93 712.1 45.1 418 65-486 6-478 (479)
23 3qan_A 1-pyrroline-5-carboxyla 100.0 4.5E-88 1.5E-92 717.3 46.2 416 65-487 37-516 (538)
24 4e4g_A Methylmalonate-semialde 100.0 2.8E-88 9.4E-93 716.3 41.7 422 63-489 24-507 (521)
25 3r64_A NAD dependent benzaldeh 100.0 3.1E-87 1.1E-91 708.0 44.5 420 61-487 8-485 (508)
26 4dng_A Uncharacterized aldehyd 100.0 3.8E-87 1.3E-91 705.1 44.3 419 64-489 5-480 (485)
27 2w8n_A Succinate-semialdehyde 100.0 3E-87 1E-91 704.7 42.2 414 66-486 13-485 (487)
28 3pqa_A Lactaldehyde dehydrogen 100.0 6.3E-87 2.2E-91 700.9 42.9 405 68-487 2-464 (486)
29 3ros_A NAD-dependent aldehyde 100.0 6.1E-87 2.1E-91 700.6 41.1 401 82-487 5-458 (484)
30 2j6l_A Aldehyde dehydrogenase 100.0 1.4E-86 4.8E-91 701.7 44.0 417 64-487 22-499 (500)
31 3ty7_A Putative aldehyde dehyd 100.0 8.7E-87 3E-91 701.1 38.1 414 64-485 6-475 (478)
32 1t90_A MMSDH, probable methylm 100.0 4.6E-86 1.6E-90 696.0 43.5 421 65-491 5-484 (486)
33 1euh_A NADP dependent non phos 100.0 3.3E-86 1.1E-90 695.7 41.5 411 65-487 4-474 (475)
34 1uxt_A Glyceraldehyde-3-phosph 100.0 2.4E-86 8.4E-91 699.5 39.8 429 53-492 6-498 (501)
35 1uzb_A 1-pyrroline-5-carboxyla 100.0 3.3E-85 1.1E-89 693.7 46.3 413 66-486 38-515 (516)
36 4e3x_A Delta-1-pyrroline-5-car 100.0 1.4E-85 4.7E-90 699.6 40.1 423 64-491 62-555 (563)
37 3etf_A Putative succinate-semi 100.0 2.8E-84 9.6E-89 679.7 44.0 404 79-487 5-461 (462)
38 3ju8_A Succinylglutamic semial 100.0 1.8E-82 6E-87 669.4 41.8 408 67-487 7-471 (490)
39 4h7n_A Aldehyde dehydrogenase; 100.0 3.4E-82 1.2E-86 665.1 41.2 408 78-493 3-472 (474)
40 4f9i_A Proline dehydrogenase/d 100.0 2.1E-81 7.1E-86 701.8 42.8 417 65-487 531-1010(1026)
41 2y53_A Aldehyde dehydrogenase 100.0 2.6E-80 8.9E-85 659.4 40.9 411 66-486 8-518 (534)
42 3lns_A Benzaldehyde dehydrogen 100.0 3.5E-79 1.2E-83 639.4 41.4 392 81-486 6-456 (457)
43 3sza_A Aldehyde dehydrogenase, 100.0 3.2E-77 1.1E-81 625.1 42.0 376 100-487 15-448 (469)
44 3v4c_A Aldehyde dehydrogenase 100.0 3E-77 1E-81 635.0 34.9 400 63-483 27-514 (528)
45 1ez0_A ALDH, aldehyde dehydrog 100.0 2.8E-74 9.5E-79 609.8 37.3 390 77-484 3-480 (510)
46 3haz_A Proline dehydrogenase; 100.0 9E-73 3.1E-77 630.8 39.0 382 97-487 544-987 (1001)
47 2h5g_A Delta 1-pyrroline-5-car 100.0 3.4E-68 1.1E-72 555.6 19.6 354 84-487 10-435 (463)
48 3k9d_A LMO1179 protein, aldehy 100.0 2.6E-65 9E-70 535.5 20.9 367 96-489 5-451 (464)
49 1vlu_A Gamma-glutamyl phosphat 100.0 4.8E-65 1.6E-69 532.4 14.9 344 104-487 15-440 (468)
50 1o20_A Gamma-glutamyl phosphat 100.0 1.7E-63 5.8E-68 516.2 21.4 337 101-487 12-422 (427)
51 4ghk_A Gamma-glutamyl phosphat 100.0 8.2E-63 2.8E-67 513.5 21.7 338 102-487 25-439 (444)
52 3my7_A Alcohol dehydrogenase/a 100.0 4.2E-61 1.4E-65 502.0 18.7 361 97-490 1-452 (452)
53 4gic_A HDH, histidinol dehydro 89.7 17 0.0006 36.2 21.0 82 398-483 313-399 (423)
54 2fiu_A Conserved hypothetical 78.5 4.5 0.00015 31.8 6.1 60 338-417 16-76 (99)
55 3lo3_A Uncharacterized conserv 69.3 12 0.0004 29.0 6.4 61 337-417 14-75 (94)
56 1kae_A HDH, histidinol dehydro 65.9 2.9 0.0001 41.8 2.7 77 398-483 306-392 (434)
57 3hhl_A RPA0582; alpha-beta-bar 58.2 16 0.00054 30.8 5.5 66 335-417 44-110 (143)
58 3fxd_A Protein ICMQ; helix bun 53.4 32 0.0011 23.7 5.2 47 100-152 5-51 (57)
59 1s7i_A Hypothetical protein PA 50.8 45 0.0015 27.1 7.1 73 340-418 30-108 (124)
60 2l82_A Designed protein OR32; 26.9 2.3E+02 0.0079 22.2 12.4 140 232-413 5-146 (162)
61 2ioj_A Hypothetical protein AF 25.1 45 0.0015 27.4 3.0 44 208-251 53-96 (139)
62 4g6u_B EC869 CDII; beta-augmen 23.9 99 0.0034 26.8 4.9 82 67-156 12-96 (177)
63 1use_A VAsp, vasodilator-stimu 20.9 1.5E+02 0.0052 19.4 4.1 27 130-156 14-40 (45)
No 1
>2wme_A BADH, betaine aldehyde dehydrogenase; aldehyde oxidation, NAD, NADP complex, oxidoreductase; HET: NAP CSO; 2.10A {Pseudomonas aeruginosa} PDB: 2wox_A* 3zqa_A* 2xdr_A*
Probab=100.00 E-value=2.5e-96 Score=771.52 Aligned_cols=427 Identities=43% Similarity=0.729 Sum_probs=407.3
Q ss_pred CccccceeCCEeeeCCCCCeeeeecCCCCCeEEEEecCCHHHHHHHHHHHHHHccCCCCCCCCHHHHHHHHHHHHHHHHH
Q 011130 63 VDYTQLLINGQFVDSASGKTFPTLDPRTGDVITHVAEGEAEDVNRAVSAARKAFDEGPWPRMTAYERSKIILRFADLLER 142 (493)
Q Consensus 63 ~~~~~~~I~G~~~~~~~~~~~~v~~P~tg~~i~~v~~~~~~~v~~av~~A~~A~~~~~w~~~~~~~R~~iL~~la~~l~~ 142 (493)
++..++||||+|+.+.++++++++||+||++|++++.++.+|+++||++|++||+ .|+++|..+|.++|++++++|++
T Consensus 4 ~~~~kl~I~G~~~~~~~~~~~~v~nP~tg~~i~~v~~a~~~dv~~Av~aA~~A~~--~W~~~~~~~R~~~L~~~a~~l~~ 81 (490)
T 2wme_A 4 FEEQKLYIGGRYVEASSGATFETINPANGEVLAKVQRASREDVERAVQSAVEGQK--VWAAMTAMQRSRILRRAVDILRE 81 (490)
T ss_dssp SCCBCEECSSSEECCSSSCEEEEECTTTCCEEEEEECCCHHHHHHHHHHHHHHHH--HHHHSCHHHHHHHHHHHHHHHHH
T ss_pred CCCCcEEECCeeeCCCCCCEEEeeCCCCCCEEEEEeCCCHHHHHHHHHHHHHHHH--HHhhCCHHHHHHHHHHHHHHHHH
Confidence 3456899999999988899999999999999999999999999999999999999 99999999999999999999999
Q ss_pred hHHHHHHHHHHHcCCChhhhhhccHHHHHHHHHHHHHhhHHhcCccCCCCCCceeEEEeeeeeeE---------------
Q 011130 143 HNDEIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADKIQGLTAPADGPYHVQTLHEPIGVA--------------- 207 (493)
Q Consensus 143 ~~~ela~~~~~e~Gk~~~~a~~~Ev~~~~~~l~~~a~~~~~~~~~~~~~~~~~~~~~~~~PlGVv--------------- 207 (493)
|.++|++++++|+|||+.+++..|+..+++.++||+++++++.+...+...+...++.++|+|||
T Consensus 82 ~~~ela~~~~~e~Gk~~~ea~~~~v~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~PwNfP~~~~~~ 161 (490)
T 2wme_A 82 RNDELAALETLDTGKPLAETRSVDIVTGADVLEYYAGLVPAIEGEQIPLRETSFVYTRREPLGVVAGIGAWNYPVQIALW 161 (490)
T ss_dssp THHHHHHHHHHHHCCCHHHHTTTHHHHHHHHHHHHHHHGGGCCEEEEEEETTEEEEEEEEECSEEEEECCSSSHHHHHHH
T ss_pred hHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHhccccccCccccccCCcceeEEecceeEEEEeccccCcchhhhh
Confidence 99999999999999999999866799999999999999999888777766777889999999999
Q ss_pred --------------------------------------eEEEeeeCCccchhhhhhccccccEEEEecCcHHHHHHHHHH
Q 011130 208 --------------------------------------GVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLA 249 (493)
Q Consensus 208 --------------------------------------gvv~vv~~~~~~~~~~L~~~~~v~~v~fTGs~~~g~~v~~~a 249 (493)
|++|+|+|.+.++++.|+.||+||+|+||||+.+|+.|++.+
T Consensus 162 ~~a~ALaaGNtVVlKPse~tp~ta~~l~~l~~eaGlP~gv~~vv~g~g~~~g~~L~~~p~v~~I~FTGS~~~G~~i~~~~ 241 (490)
T 2wme_A 162 KSAPALAAGNAMIFKPSEVTPLTALKLAEIYTEAGVPDGVFNVLTGSGREVGQWLTEHPLIEKISFTGGTSTGKKVMASA 241 (490)
T ss_dssp HHHHHHHTTCEEEEECCTTSCHHHHHHHHHHHHHTCCTTSEEECCSCTTTHHHHHHHCTTCCEEEEESCHHHHHHHHHHH
T ss_pred hHHHHHHcCCeEEEECCcCCHHHHHHHHHHHHHhCCCCCcEEEEeCChHHHHHHHHhCCCCCEEEEECChHHHHHHHHhh
Confidence 899999998889999999999999999999999999998755
Q ss_pred hhcCCCceeEecCCCCceEEccCCCHHHHHHHHHHHHHhhcCCcccCCCeeEecchhHHHHHHHHHHHHhhcccCCCCCC
Q 011130 250 AKSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMKRVVGDPFKG 329 (493)
Q Consensus 250 ~~~~~~pv~lelgG~~p~iV~~daDl~~aa~~i~~~~~~~~GQ~C~a~~~v~V~~~i~d~f~~~l~~~~~~~~vg~p~~~ 329 (493)
+..++||++||||||||+||++|||++.|++.+++++|.|+||.|++++|||||+++||+|+++|+++++++++|||.|+
T Consensus 242 a~~~lk~v~lELGGk~p~iV~~dAdl~~A~~~~~~~~~~n~GQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~l~vGdp~~~ 321 (490)
T 2wme_A 242 SSSSLKEVTMELGGKSPLIIFPDADLDRAADIAVMANFFSSGQVCTNGTRVFIHRSQQARFEAKVLERVQRIRLGDPQDE 321 (490)
T ss_dssp HHHHCCEEEEECCCCCEEEECTTSCHHHHHHHHHHHHHGGGGCCTTCCCEEEEEGGGHHHHHHHHHHHHHTCCBSCTTST
T ss_pred hccCCceEEEEcCCcCeEEEccCccHHHHHHHHHHHHhccCCCcCCCceeeccchhHHHHHHHHHHHHHHhCcCCCCccc
Confidence 44489999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCccccCCCHHHHHHHHHHHHHHHhCCCEEEeCCcccC----CCCceeeceEEecCCCCccccccccccceEEEEEeCCH
Q 011130 330 GIQQGPQIDSEQFEKILKYIRSGVDGGAKLETGGERLG----AKGYYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYKDL 405 (493)
Q Consensus 330 ~~~~gpli~~~~~~~~~~~i~~a~~~ga~v~~gg~~~~----~~g~~~~Ptvl~~~~~~~~i~~~E~fgPvl~v~~~~~~ 405 (493)
++++||+++..+++++.++|++++++|+++++||.... .+|+|++||||.+++++|++++||+||||++|++|+|+
T Consensus 322 ~~~~Gpli~~~~~~rv~~~i~~a~~~Ga~v~~gG~~~~~~~~~~G~~~~Ptvl~~v~~~~~i~~eEiFGPVl~v~~~~~~ 401 (490)
T 2wme_A 322 NTNFGPLVSFPHMESVLGYIESGKAQKARLLCGGERVTDGAFGKGAYVAPTVFTDCRDDMTIVREEIFGPVMSILVYDDE 401 (490)
T ss_dssp TCCBCCCSCHHHHHHHHHHHHHHHHTTCEEEECCSBCCTTTGGGTTCBCCEEEESCCTTSHHHHSCCCSSEEEEEEESCH
T ss_pred cCccCCcCCHHHHHHHHHHHHHHHhcCCEEEECCcccCcccccCCCccCCEEEEcCCCCChhhhccccCCEEEEEEeCCH
Confidence 99999999999999999999999999999999998653 36899999999999999999999999999999999999
Q ss_pred HHHHHHHHcCCCCcEEEEecCCHHHHHHHHHhcceeEEEECCcCCCCCCCCccCCCCCCCCCcchHHHHHhhhhceEEEE
Q 011130 406 DEVIQRSNASQYGLAAGVFTHNLDTANTLMRALRVGSVWINCFDVFDAAIPFGGYKQSGQGREKGSYSLSNYLQVKAVVT 485 (493)
Q Consensus 406 ~eai~~~n~~~~gl~a~v~t~d~~~~~~~~~~l~~g~V~VN~~~~~~~~~pfGG~~~SG~G~~~g~~~l~~~~~~k~v~~ 485 (493)
||||+++|+++|||+++|||+|.++++++++++++|+||||++....+.+||||+|+||+|+++|.++|++||+.|+|++
T Consensus 402 deAi~~aN~~~yGL~a~v~t~d~~~a~~~~~~l~aG~v~iN~~~~~~~~~PFGG~k~SG~Gre~G~~gl~~ft~~K~v~i 481 (490)
T 2wme_A 402 DEAIRRANDTEYGLAAGVVTQDLARAHRAIHRLEAGICWINTWGESPAEMPVGGYKQSGVGRENGLTTLAHYTRIKSVQV 481 (490)
T ss_dssp HHHHHHHHCSSCCSEEEEECSBHHHHHHHHHHSCCSEEEESCCSCCCTTSCBCCSGGGEESCBSHHHHHHTTEEEEEEEE
T ss_pred HHHHHHHhcCCCCCeEEEEcCCHHHHHHHHHHCCeeEEEEeCCCCCCCCCCcccccccccCchhHHHHHHHhhceeEEEE
Confidence 99999999999999999999999999999999999999999987778899999999999999999999999999999999
Q ss_pred eCCCCC
Q 011130 486 ALKNPA 491 (493)
Q Consensus 486 ~~~~~~ 491 (493)
++.+++
T Consensus 482 ~~g~~~ 487 (490)
T 2wme_A 482 ELGDYA 487 (490)
T ss_dssp ECSCCC
T ss_pred ECCCCC
Confidence 986653
No 2
>3ed6_A Betaine aldehyde dehydrogenase; structural genomics, infecti deseases, NAD, oxidoreductase, PSI; 1.70A {Staphylococcus aureus} PDB: 3fg0_A*
Probab=100.00 E-value=6.1e-91 Score=736.41 Aligned_cols=425 Identities=37% Similarity=0.635 Sum_probs=404.2
Q ss_pred cccceeCCEeeeCCCCCeeeeecCCCCCeEEEEecCCHHHHHHHHHHHHHHc--cCCCCCCCCHHHHHHHHHHHHHHHHH
Q 011130 65 YTQLLINGQFVDSASGKTFPTLDPRTGDVITHVAEGEAEDVNRAVSAARKAF--DEGPWPRMTAYERSKIILRFADLLER 142 (493)
Q Consensus 65 ~~~~~I~G~~~~~~~~~~~~v~~P~tg~~i~~v~~~~~~~v~~av~~A~~A~--~~~~w~~~~~~~R~~iL~~la~~l~~ 142 (493)
..++||||+|+.+.++++++++||+||++|++++.++.+|+++|+++|++|| + .|++++..+|.++|++++++|++
T Consensus 32 ~~~~~I~G~~~~~~~~~~~~v~nP~tg~~i~~v~~~~~~dv~~Av~aA~~A~~~~--~w~~~~~~~R~~~L~~~a~~l~~ 109 (520)
T 3ed6_A 32 SQRQYIDGEWVESANKNTRDIINPYNQEVIFTVSEGTKEDAERAILAARRAFESG--EWSQETAETRGKKVRAIADKIKE 109 (520)
T ss_dssp CCSEEETTEEECCTTCCEEEEEETTTTEEEEEEECCCHHHHHHHHHHHHHHHHHT--TTTTSCHHHHHHHHHHHHHHHHH
T ss_pred CCceEECCEEecCCCCCEEEeECCCCCCEEEEEcCCCHHHHHHHHHHHHHhcccc--ccccCCHHHHHHHHHHHHHHHHH
Confidence 4578999999988788999999999999999999999999999999999999 7 89999999999999999999999
Q ss_pred hHHHHHHHHHHHcCCChhhhhhccHHHHHHHHHHHHHhhHHhcCccCCCC-CCceeEEEeeeeeeE--------------
Q 011130 143 HNDEIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADKIQGLTAPAD-GPYHVQTLHEPIGVA-------------- 207 (493)
Q Consensus 143 ~~~ela~~~~~e~Gk~~~~a~~~Ev~~~~~~l~~~a~~~~~~~~~~~~~~-~~~~~~~~~~PlGVv-------------- 207 (493)
+.++|++++++|+|||+.+++. |+..+++.++|++++++++.+...+.. .+...++.++|+|||
T Consensus 110 ~~~ela~~~~~e~Gk~~~ea~~-ev~~~~~~~~~~a~~~~~~~g~~~~~~~~~~~~~~~~~P~GVV~~I~PwN~P~~~~~ 188 (520)
T 3ed6_A 110 HREALARLETLDTGKTLEESYA-DMDDIHNVFMYFAGLADKDGGEMIDSPIPDTESKIVKEPVGVVTQITPWNYPLLQAS 188 (520)
T ss_dssp THHHHHHHHHHHHCCCHHHHHH-HHHHHHHHHHHHHHHTTSCCEEEECCSSTTEEEEEEEEECCEEEEECCSSSHHHHHH
T ss_pred hHHHHHHHHHHHhCCCHHHHHH-HHHHHHHHHHHHHHHHHHhcCeecccCCCCCcccccccCccEEEEECCCccHHHHHH
Confidence 9999999999999999999985 999999999999999988776655543 456788999999999
Q ss_pred ---------------------------------------eEEEeeeCCccchhhhhhccccccEEEEecCcHHHHHHHHH
Q 011130 208 ---------------------------------------GVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQL 248 (493)
Q Consensus 208 ---------------------------------------gvv~vv~~~~~~~~~~L~~~~~v~~v~fTGs~~~g~~v~~~ 248 (493)
|++|+|++.+.++++.|+.||+||+|+||||+.+|+.|++.
T Consensus 189 ~~~apALaaGNtVVlKPs~~tp~t~~~l~~l~~eaGlP~gvvnvv~g~~~~~g~~L~~~p~vd~V~FTGS~~vG~~i~~~ 268 (520)
T 3ed6_A 189 WKIAPALATGCSLVMKPSEITPLTTIRVFELMEEVGFPKGTINLILGAGSEVGDVMSGHKEVDLVSFTGGIETGKHIMKN 268 (520)
T ss_dssp HHHHHHHHHTCEEEEECCTTCCHHHHHHHHHHHHHCCCTTSEEECCSCCTTHHHHHHHCTTCSEEEEESCHHHHHHHHHH
T ss_pred HHHHHHHHcCCEEEEEcCCcchHHHHHHHHHHHHhCCCCCeEEEEeCCChHHHHHHHhCCCcCEEEEECCHHHHHHHHHH
Confidence 89999999888899999999999999999999999999999
Q ss_pred HhhcCCCceeEecCCCCceEEccCCCHHHHHHHHHHHHHhhcCCcccCCCeeEecchhHHHHHHHHHHHHhhcccCCCCC
Q 011130 249 AAKSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMKRVVGDPFK 328 (493)
Q Consensus 249 a~~~~~~pv~lelgG~~p~iV~~daDl~~aa~~i~~~~~~~~GQ~C~a~~~v~V~~~i~d~f~~~l~~~~~~~~vg~p~~ 328 (493)
+++ ++||+++|||||||+||++|||++.|++.+++++|.|+||.|++++|||||+++||+|+++|+++++++++|||.|
T Consensus 269 aa~-~l~~v~lELGGk~p~IV~~dADl~~Aa~~i~~~~f~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~l~vG~p~d 347 (520)
T 3ed6_A 269 AAN-NVTNIALELGGKNPNIIFDDADFELAVDQALNGGYFHAGQVCSAGSRILVQNSIKDKFEQALIDRVKKIKLGNGFD 347 (520)
T ss_dssp HHT-TTCEEEEECCCCCEEEECTTSCHHHHHHHHHHHHHGGGGTSTTCCCEEEEEHHHHHHHHHHHHHHHTTCCBCCTTS
T ss_pred hhh-cCCCEEEEcCCCCeeEECCCCCHHHHHHHHHHHHHhcCCCCcccCceEEEcHHHHHHHHHHHHHHHHhccCCCCcc
Confidence 998 8999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCccccCCCHHHHHHHHHHHHHHHhCCCEEEeCCcccC----CCCceeeceEEecCCCCccccccccccceEEEEEeCC
Q 011130 329 GGIQQGPQIDSEQFEKILKYIRSGVDGGAKLETGGERLG----AKGYYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYKD 404 (493)
Q Consensus 329 ~~~~~gpli~~~~~~~~~~~i~~a~~~ga~v~~gg~~~~----~~g~~~~Ptvl~~~~~~~~i~~~E~fgPvl~v~~~~~ 404 (493)
+++++||++++.+++++.++|++++++|+++++||.... ..|+|++|||+.+++++|++++||+||||++|++|+|
T Consensus 348 ~~~~~Gpli~~~~~~~v~~~i~~a~~~Ga~v~~gG~~~~~~~~~~g~f~~PTvl~~v~~~~~i~~eEiFGPVl~v~~~~~ 427 (520)
T 3ed6_A 348 ADTEMGPVISTEHRNKIESYMDVAKAEGATIAVGGKRPDRDDLKDGLFFEPTVITNCDTSMRIVQEEVFGPVVTVEGFET 427 (520)
T ss_dssp TTCSBCCCSCHHHHHHHHHHHHHHHHTTCEEEECCSCCCCGGGTTTTCCCCEEEESCCTTSHHHHSCCCSSEEEEEEESS
T ss_pred CCCcccccCCHHHHHHHHHHHHHHHhCCCEEEeCCCcCccccCCCCceECCeEEecCCCCCccccCceeCcEEEEEEeCC
Confidence 999999999999999999999999999999999997642 4799999999999999999999999999999999999
Q ss_pred HHHHHHHHHcCCCCcEEEEecCCHHHHHHHHHhcceeEEEECCcCCCCCCCCccCCCCCCCCCcchHHHHHhhhhceEEE
Q 011130 405 LDEVIQRSNASQYGLAAGVFTHNLDTANTLMRALRVGSVWINCFDVFDAAIPFGGYKQSGQGREKGSYSLSNYLQVKAVV 484 (493)
Q Consensus 405 ~~eai~~~n~~~~gl~a~v~t~d~~~~~~~~~~l~~g~V~VN~~~~~~~~~pfGG~~~SG~G~~~g~~~l~~~~~~k~v~ 484 (493)
+||||+++|+++|||+++|||+|.++++++++++++|+||||+++...+.+||||+|+||+|+++|.+++++|++.|+|+
T Consensus 428 ~deAi~~aN~~~~GL~a~v~t~d~~~a~~~a~~l~aG~V~iN~~~~~~~~~PfGG~k~SG~Gre~G~~gl~~~t~~k~v~ 507 (520)
T 3ed6_A 428 EQEAIQLANDSIYGLAGAVFSKDIGKAQRVANKLKLGTVWINDFHPYFAQAPWGGYKQSGIGRELGKEGLEEYLVSKHIL 507 (520)
T ss_dssp HHHHHHHHTCSSCCSEEEEECSCHHHHHHHHHHSCCSEEEESCSCCCCTTSCBCCSGGGEESCBSHHHHHHTTEEEEEEE
T ss_pred HHHHHHHHhCCCCCcEEEEECCCHHHHHHHHHHCCcceEEECCCCCCCCCCCcCCcCcCcCCccchHHHHHHhhceEEEE
Confidence 99999999999999999999999999999999999999999998877889999999999999999999999999999999
Q ss_pred EeCCC--CCCC
Q 011130 485 TALKN--PAWL 493 (493)
Q Consensus 485 ~~~~~--~~~~ 493 (493)
++... ..||
T Consensus 508 ~~~~~~~~~~~ 518 (520)
T 3ed6_A 508 TNTNPQLVNWF 518 (520)
T ss_dssp EESSCCCCCCS
T ss_pred EcCCCCccCcc
Confidence 98753 3565
No 3
>3rh9_A Succinate-semialdehyde dehydrogenase (NAD(P)(+)); structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.63A {Marinobacter aquaeolei}
Probab=100.00 E-value=1.4e-90 Score=731.29 Aligned_cols=421 Identities=34% Similarity=0.537 Sum_probs=402.0
Q ss_pred CccccceeCCEeeeCCCCCeeeeecCCCCCeEEEEecCCHHHHHHHHHHHHHHccCCCCCCCCHHHHHHHHHHHHHHHHH
Q 011130 63 VDYTQLLINGQFVDSASGKTFPTLDPRTGDVITHVAEGEAEDVNRAVSAARKAFDEGPWPRMTAYERSKIILRFADLLER 142 (493)
Q Consensus 63 ~~~~~~~I~G~~~~~~~~~~~~v~~P~tg~~i~~v~~~~~~~v~~av~~A~~A~~~~~w~~~~~~~R~~iL~~la~~l~~ 142 (493)
....++||||+|+.+.++++++++||+||+++++++.++.+|+++|+++|++||+ .|+.++..+|.++|++++++|++
T Consensus 9 ~~~~~~~I~G~~~~~~~~~~~~v~~P~tg~~i~~v~~~~~~dv~~av~aA~~A~~--~w~~~~~~~R~~~L~~~a~~l~~ 86 (506)
T 3rh9_A 9 LENLTGYIGGRWKDSAGGATFDVYNPATGSVIAKVPSMPEEDVVAAVEAGQSALR--LTNPWPIETRRKWLEDIRDGLKE 86 (506)
T ss_dssp GSCCSEEETTEEECCCTTCEEEEECTTTCCEEEEEECCCHHHHHHHHHHHHHHCC--SSSCCCHHHHHHHHHHHHHHHHH
T ss_pred ccccCeeECCEEeeCCCCCEEEEECCCCCCEEEEEcCCCHHHHHHHHHHHHHHHH--HhccCCHHHHHHHHHHHHHHHHH
Confidence 3456899999999887889999999999999999999999999999999999999 99999999999999999999999
Q ss_pred hHHHHHHHHHHHcCCChhhhhhccHHHHHHHHHHHHHhhHHhcCccCCCCCCceeEEEe-eeeeeE--------------
Q 011130 143 HNDEIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADKIQGLTAPADGPYHVQTLH-EPIGVA-------------- 207 (493)
Q Consensus 143 ~~~ela~~~~~e~Gk~~~~a~~~Ev~~~~~~l~~~a~~~~~~~~~~~~~~~~~~~~~~~-~PlGVv-------------- 207 (493)
+.++|++++++|+|||+.+++ .|+..+++.++|++++++++.+...+...+...++.+ +|+|||
T Consensus 87 ~~~ela~~~~~e~Gk~~~ea~-~ev~~~~~~l~~~a~~~~~~~~~~~~~~~~~~~~~~~~~P~GVV~~I~PwN~P~~~~~ 165 (506)
T 3rh9_A 87 NREEIGRILCMEHGKPWKEAQ-GEVDYAAGFFDYCAKHISALDSHTIPEKPKDCTWTVHYRPVGVTGLIVPWNFPIGMIA 165 (506)
T ss_dssp THHHHHHHHHHHHCCCHHHHH-HHHHHHHHHHHHHHHHGGGGCCEECSCCGGGCEEEEEEEECCSEEEECCSSSTTHHHH
T ss_pred hHHHHHHHHHHHhCCCHHHHH-HHHHHHHHHHHHHHHHHHHhcCcccccCCCceeeEeecccceEEEEECCCchHHHHHH
Confidence 999999999999999999998 5999999999999999998877765544456778889 999998
Q ss_pred ---------------------------------------eEEEeeeCCccchhhhhhccccccEEEEecCcHHHHHHHHH
Q 011130 208 ---------------------------------------GVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQL 248 (493)
Q Consensus 208 ---------------------------------------gvv~vv~~~~~~~~~~L~~~~~v~~v~fTGs~~~g~~v~~~ 248 (493)
|++|+|++.+.++++.|+.||+||+|+||||+.+|+.|++.
T Consensus 166 ~~~a~ALaaGN~VVlKps~~tp~t~~~l~~l~~eaGlP~gvv~vv~g~~~~~g~~L~~~p~vd~I~FTGS~~vG~~i~~~ 245 (506)
T 3rh9_A 166 KKLSAALAAGCPSVIKPASETPLTMIAFFSVMDKLDLPDGMVNLVMGKASVIGKVLCEHKDVPMLSFTGSTEVGRKLIVD 245 (506)
T ss_dssp HHHHHHHHHTCCEEEECCTTSCHHHHHHHHHHTTTTCCTTSEEECCSCHHHHHHHHHHCTTCCEEEEESCHHHHHHHHHH
T ss_pred HHHHHHHHcCCEEEEEcCCccHHHHHHHHHHHHHhCcChhhEEEEeCCChHHHHHHHhCCCCCEEEEECCHHHHHHHHHH
Confidence 89999999888899999999999999999999999999999
Q ss_pred HhhcCCCceeEecCCCCceEEccCCCHHHHHHHHHHHHHhhcCCcccCCCeeEecchhHHHHHHHHHHHHhhcccCCCCC
Q 011130 249 AAKSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMKRVVGDPFK 328 (493)
Q Consensus 249 a~~~~~~pv~lelgG~~p~iV~~daDl~~aa~~i~~~~~~~~GQ~C~a~~~v~V~~~i~d~f~~~l~~~~~~~~vg~p~~ 328 (493)
+++ ++||+++|||||||+||++|||++.|++.+++++|.|+||.|++++|||||++++|+|+++|+++++++++|+|.+
T Consensus 246 aa~-~l~~v~lElGGk~p~iV~~dADl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~~G~p~~ 324 (506)
T 3rh9_A 246 TAE-QVKKLALELGGNAPFIVFDDADLEAAADNLIANKFRGGGQTCVCANRIFVHEKVADAFGQKLAERVNKMTVGDGMN 324 (506)
T ss_dssp TTT-TTCEEEEECCCCCEEEECTTSCHHHHHHHHHHHHHGGGGCSSSSCCEEEEETTTHHHHHHHHHHHHHHCCBSCTTS
T ss_pred hhh-cCCceEEecCCCCceEECCCCCHHHHHHHHHHHHHHhCCCCcccCcEEEEcHHHHHHHHHHHHHHHHhccCCCCcc
Confidence 988 8999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCccccCCCHHHHHHHHHHHHHHHhCCCEEEeCCcccCC-CCceeeceEEecCCCCccccccccccceEEEEEeCCHHH
Q 011130 329 GGIQQGPQIDSEQFEKILKYIRSGVDGGAKLETGGERLGA-KGYYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYKDLDE 407 (493)
Q Consensus 329 ~~~~~gpli~~~~~~~~~~~i~~a~~~ga~v~~gg~~~~~-~g~~~~Ptvl~~~~~~~~i~~~E~fgPvl~v~~~~~~~e 407 (493)
+++++||++++.+++++.++|++++++|+++++||...+. .|+|++|||+.+++++|++++||+||||++|++|+|+||
T Consensus 325 ~~~~~Gpli~~~~~~rv~~~i~~a~~~Ga~v~~gG~~~~~~~g~~~~PTvl~~v~~~~~i~~eEiFGPVl~v~~~~~~de 404 (506)
T 3rh9_A 325 DGIDIGPLINKQGFDKVKRHLQDALDKGASLVAGKQPAELGDGLFFPPTVVQGVDREMCCYQEETFGPLVPMALFRTEEE 404 (506)
T ss_dssp TTCSBCCCSCHHHHHHHHHHHHHHHHTTCEEEESCCGGGCCSSSCCCCEEEECCCTTSHHHHSCCCSSEEEEEEECCHHH
T ss_pred cCCcccccCCHHHHHHHHHHHHHHHHCCCEEEecCCcCCCCCCcEECCeEEccCCCCChhhcccccCcEEEEEEeCCHHH
Confidence 9999999999999999999999999999999999986444 799999999999999999999999999999999999999
Q ss_pred HHHHHHcCCCCcEEEEecCCHHHHHHHHHhcceeEEEECCcCCCCCCCCccCCCCCCCCCcchHHHHHhhhhceEEEEeC
Q 011130 408 VIQRSNASQYGLAAGVFTHNLDTANTLMRALRVGSVWINCFDVFDAAIPFGGYKQSGQGREKGSYSLSNYLQVKAVVTAL 487 (493)
Q Consensus 408 ai~~~n~~~~gl~a~v~t~d~~~~~~~~~~l~~g~V~VN~~~~~~~~~pfGG~~~SG~G~~~g~~~l~~~~~~k~v~~~~ 487 (493)
||+++|+++|||+++|||+|.+.++++++++++|+||||++....+.+||||+|+||+|+++|++++++|++.|+|+++.
T Consensus 405 Ai~~aN~~~~gLaa~v~t~d~~~a~~~~~~l~aG~V~vN~~~~~~~~~PfGG~k~SG~G~~~G~~gl~~ft~~K~v~~~~ 484 (506)
T 3rh9_A 405 VIDAGNDTEFGLASYVFTADAERAQRVAAGLRFGHVGWNTGTGPTPEAPFGGMKASGIGREGGLEGLFEFVEAQTVPRGF 484 (506)
T ss_dssp HHHHHTCSSCCSEEEEECSCHHHHHHHHHHCCCSEEEESCCCCCCTTSCBCCSGGGEESCBSHHHHHTTTEEEEEEEEC-
T ss_pred HHHHHhCCCCCceEEEEcCCHHHHHHHHHhCCcceEEEcCCCCCCCCCCccCcCcCcCCcCccHHHHHHhcceEEEEEcC
Confidence 99999999999999999999999999999999999999998888889999999999999999999999999999998763
No 4
>3ifg_A Succinate-semialdehyde dehydrogenase (NADP+); niaid,.infectious disease, ssgcid, seattle structural genomi for infectious disease; 2.70A {Burkholderia pseudomallei} PDB: 3ifh_Q
Probab=100.00 E-value=4.4e-91 Score=732.67 Aligned_cols=418 Identities=36% Similarity=0.593 Sum_probs=399.3
Q ss_pred cccceeCCEeeeCCCCCeeeeecCCCCCeEEEEecCCHHHHHHHHHHHHHHccCCCCCCCCHHHHHHHHHHHHHHHHHhH
Q 011130 65 YTQLLINGQFVDSASGKTFPTLDPRTGDVITHVAEGEAEDVNRAVSAARKAFDEGPWPRMTAYERSKIILRFADLLERHN 144 (493)
Q Consensus 65 ~~~~~I~G~~~~~~~~~~~~v~~P~tg~~i~~v~~~~~~~v~~av~~A~~A~~~~~w~~~~~~~R~~iL~~la~~l~~~~ 144 (493)
..++||||+|+.+.++++++++||+||+++++++.++.+|+++|+++|++||+ .|++++..+|.++|++++++|+++.
T Consensus 12 ~~~~~I~G~~~~~~~~~~~~v~~P~tg~~i~~~~~~~~~dv~~av~aA~~A~~--~w~~~~~~~R~~~L~~~a~~l~~~~ 89 (484)
T 3ifg_A 12 RHQAYIGGEWQAADSDATFEVFDPATGESLGTVPKMGAAETARAIEAAQAAWA--GWRMKTAKERAAILRRWFDLVIANS 89 (484)
T ss_dssp CCSEEETTEEECCTTCCEEEEECTTTCCEEEEEECBCHHHHHHHHHHHHHHHH--HHHTSCHHHHHHHHHHHHHHHHHTH
T ss_pred ccceeECCEEeeCCCCCEEEeECCCCCCEEEEEcCCCHHHHHHHHHHHHHHHH--HhccCCHHHHHHHHHHHHHHHHHHH
Confidence 45789999999877889999999999999999999999999999999999999 9999999999999999999999999
Q ss_pred HHHHHHHHHHcCCChhhhhhccHHHHHHHHHHHHHhhHHhcCccCCCC-CCceeEEEeeeeeeE----------------
Q 011130 145 DEIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADKIQGLTAPAD-GPYHVQTLHEPIGVA---------------- 207 (493)
Q Consensus 145 ~ela~~~~~e~Gk~~~~a~~~Ev~~~~~~l~~~a~~~~~~~~~~~~~~-~~~~~~~~~~PlGVv---------------- 207 (493)
++|++++++|+|||..+++. |+..+++.++|++.+++++.+...+.. .+...++.++|+|||
T Consensus 90 ~ela~~~~~e~Gk~~~~a~~-ev~~~~~~l~~~a~~~~~~~g~~~~~~~~~~~~~~~~~P~GVv~~I~PwN~P~~~~~~~ 168 (484)
T 3ifg_A 90 DDLALILTTEQGKPLAEAKG-EIAYAASFIEWFAEEGKRVAGDTLPTPDANKRIVVVKEPIGVCAAITPWNFPAAMIARK 168 (484)
T ss_dssp HHHHHHHHHHHCCCHHHHHH-HHHHHHHHHHHHHHHHTTCCEEEECCSSTTEEEEEEEEECSSEEEECCSSSTTHHHHHH
T ss_pred HHHHHHHHHHcCCCHHHHHH-HHHHHHHHHHHHHHHHHhhcCccccccCCCceeEEEecCCcEEEEECCCcChHHHHHHH
Confidence 99999999999999999985 999999999999999888766655533 456788999999998
Q ss_pred -------------------------------------eEEEeeeCCccchhhhhhccccccEEEEecCcHHHHHHHHHHh
Q 011130 208 -------------------------------------GVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLAA 250 (493)
Q Consensus 208 -------------------------------------gvv~vv~~~~~~~~~~L~~~~~v~~v~fTGs~~~g~~v~~~a~ 250 (493)
|++|+|++.+.++++.|+.||+||+|+||||+.+|+.|++.++
T Consensus 169 ~a~ALaaGN~VVlKps~~tp~t~~~l~~l~~~aGlP~gv~~vv~g~~~~~g~~L~~~p~v~~v~FTGS~~~G~~i~~~aa 248 (484)
T 3ifg_A 169 VGPALAAGCPIVVKPAESTPFSALAMAFLAERAGVPKGVLSVVIGDPKAIGTEITSNPIVRKLSFTGSTAVGRLLMAQSA 248 (484)
T ss_dssp HHHHHHHTCCEEEECCTTSCHHHHHHHHHHHHHTCCTTSEEECCBCHHHHHHHHHHCTTCCEEEEESCHHHHHHHHHHTG
T ss_pred HHHHHHcCCEEEEECCCCCcHHHHHHHHHHHHhCCCcccEEEEeCCCHHHHHHHHhCCCcCEEEEECCHHHHHHHHHHhh
Confidence 8999999988889999999999999999999999999999998
Q ss_pred hcCCCceeEecCCCCceEEccCCCHHHHHHHHHHHHHhhcCCcccCCCeeEecchhHHHHHHHHHHHHhhcccCCCCCCC
Q 011130 251 KSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMKRVVGDPFKGG 330 (493)
Q Consensus 251 ~~~~~pv~lelgG~~p~iV~~daDl~~aa~~i~~~~~~~~GQ~C~a~~~v~V~~~i~d~f~~~l~~~~~~~~vg~p~~~~ 330 (493)
+ ++||+++|||||||+||++|||+|.|++.+++++|.|+||.|++++|||||+++||+|+++|+++++++++|||.|++
T Consensus 249 ~-~~k~v~lElGGk~p~iV~~dADl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~~G~p~~~~ 327 (484)
T 3ifg_A 249 P-TVKKLTLELGGNAPFIVFDDADLDAAVEGAIASKYRNNGQTCVCTNRFFVHERVYDAFADKLAAAVSKLKVGRGTESG 327 (484)
T ss_dssp G-GTCEEEEECCCCCEEEECTTSCHHHHHHHHHHHHHGGGGCSTTCCCEEEEEGGGHHHHHHHHHHHHHTCCBSCTTSTT
T ss_pred c-cCCceEEecCCCCeEEECCCCCHHHHHHHHHHHHHhcCCCcccCCCeEEEcHHHHHHHHHHHHHHHHhccCCCCCCCC
Confidence 8 899999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CccccCCCHHHHHHHHHHHHHHHhCCCEEEeCCcccCCCCceeeceEEecCCCCccccccccccceEEEEEeCCHHHHHH
Q 011130 331 IQQGPQIDSEQFEKILKYIRSGVDGGAKLETGGERLGAKGYYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYKDLDEVIQ 410 (493)
Q Consensus 331 ~~~gpli~~~~~~~~~~~i~~a~~~ga~v~~gg~~~~~~g~~~~Ptvl~~~~~~~~i~~~E~fgPvl~v~~~~~~~eai~ 410 (493)
+++||+++..+++++.++|++++++|+++++||...+..|+|++|||+.+++++|++++||+||||++|++|+|+||||+
T Consensus 328 ~~~Gpli~~~~~~~v~~~i~~a~~~Ga~v~~gG~~~~~~g~~~~PTvl~~v~~~~~i~~eEiFGPVl~v~~~~~~deAi~ 407 (484)
T 3ifg_A 328 ATLGPLINEAAVKKVESHIADALAKGASLMTGGKRHALGHGFFEPTVLTGVKPDMDVAKEETFGPLAPLFRFASEEELVR 407 (484)
T ss_dssp CCBCCCSSHHHHHHHHHHHHHHHHTTCEEEECCSBCTTCTTCBCCEEEEEECTTSGGGTSCCCSSEEEEEEECCHHHHHH
T ss_pred CCCCCCcCHHHHHHHHHHHHHHHHCCCEEEECCCccCCCCceEcCEEEecCCCCChhhCCeeeCcEEEEEEeCCHHHHHH
Confidence 99999999999999999999999999999999987555799999999999999999999999999999999999999999
Q ss_pred HHHcCCCCcEEEEecCCHHHHHHHHHhcceeEEEECCcCCCCCCCCccCCCCCCCCCcchHHHHHhhhhceEEEEe
Q 011130 411 RSNASQYGLAAGVFTHNLDTANTLMRALRVGSVWINCFDVFDAAIPFGGYKQSGQGREKGSYSLSNYLQVKAVVTA 486 (493)
Q Consensus 411 ~~n~~~~gl~a~v~t~d~~~~~~~~~~l~~g~V~VN~~~~~~~~~pfGG~~~SG~G~~~g~~~l~~~~~~k~v~~~ 486 (493)
++|+++|||+++|||+|.++++++++++++|+||||+.....+.+||||+|+||+|+++|.+++++|++.|+|++.
T Consensus 408 ~aN~~~~GL~a~v~t~d~~~a~~~~~~l~aG~v~iN~~~~~~~~~PfGG~k~SG~Gr~~g~~gl~~~~~~k~v~~~ 483 (484)
T 3ifg_A 408 LANDTEFGLAAYLYSRDIGRVWRVAEALEYGMVGINTGLISNEVAPFGGVKQSGLGREGSHYGIDDYVVIKYLCVA 483 (484)
T ss_dssp HHHCSSEESEEEEECCBHHHHHHHHHHCCCSEEEESCSCCCCSSSCBCCEETTEECCBSTTTTTGGGEEEEEEEEE
T ss_pred HHhCCCCCceEEEECCCHHHHHHHHHhCCcceEEEcCCCCCCCCCCcCCcCcCcCCCCchHHHHHHhhceEEEEEe
Confidence 9999999999999999999999999999999999999777788999999999999999999999999999999875
No 5
>4f3x_A Putative aldehyde dehydrogenase; structural genomics, protein structure initiative, nysgrc, P biology; HET: MSE NAD; 2.01A {Sinorhizobium meliloti} PDB: 4dal_A*
Probab=100.00 E-value=1e-90 Score=731.73 Aligned_cols=420 Identities=32% Similarity=0.554 Sum_probs=399.6
Q ss_pred ccccceeCCEeeeCCCCCeeeeecCCCCCeEEEEecCCHHHHHHHHHHHHHHccCCCCCCCCHHHHHHHHHHHHHHHHHh
Q 011130 64 DYTQLLINGQFVDSASGKTFPTLDPRTGDVITHVAEGEAEDVNRAVSAARKAFDEGPWPRMTAYERSKIILRFADLLERH 143 (493)
Q Consensus 64 ~~~~~~I~G~~~~~~~~~~~~v~~P~tg~~i~~v~~~~~~~v~~av~~A~~A~~~~~w~~~~~~~R~~iL~~la~~l~~~ 143 (493)
...++||||+|+.+.++ +++++||+||+++++++.++.+|+++||++|++||+ .|++++..+|.++|++++++|+++
T Consensus 24 ~~~~~~I~G~~~~~~~~-~~~v~nP~tg~~i~~v~~~~~~dv~~Av~aA~~A~~--~w~~~~~~~R~~~L~~~a~~l~~~ 100 (498)
T 4f3x_A 24 MDTQLLIGSRFEAGTEA-EEHILNPRTGAGIIDLAEASHAQIDAAVDAAERAFV--GWSQTTPAERSNALLKIADAIEKE 100 (498)
T ss_dssp CCCCEEETTEEECCCSC-EEEEECTTTCCEEEEEECCCHHHHHHHHHHHHHHHH--HHTTCCHHHHHHHHHHHHHHHHHT
T ss_pred cccCeeECCEEeeCCCC-eEEEECCCCCCEEEEEcCCCHHHHHHHHHHHHHHHH--HhccCCHHHHHHHHHHHHHHHHHh
Confidence 44689999999987666 999999999999999999999999999999999999 999999999999999999999999
Q ss_pred HHHHHHHHHHHcCCChhhhhhccHHHHHHHHHHHHHhhHHhcCccCCC-CCCceeEEEeeeeeeE---------------
Q 011130 144 NDEIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADKIQGLTAPA-DGPYHVQTLHEPIGVA--------------- 207 (493)
Q Consensus 144 ~~ela~~~~~e~Gk~~~~a~~~Ev~~~~~~l~~~a~~~~~~~~~~~~~-~~~~~~~~~~~PlGVv--------------- 207 (493)
.++|++++++|+|||..++...|+..+++.++|++++++++.+...+. ..+...++.++|+|||
T Consensus 101 ~~ela~~~~~e~Gk~~~ea~~~ev~~~~~~l~~~a~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~PwN~P~~~~~~ 180 (498)
T 4f3x_A 101 ADEFAALEALNCGKPINAVKNDELPAIIDCWRFFAGAVRNLHAPAAGEYLPGHTSMIRRDPIGIVGSIAPWNYPLMMMAW 180 (498)
T ss_dssp HHHHHHHHHHHHCCCHHHHHHTHHHHHHHHHHHHHHHTTCCEEECBEEEETTEEEEEEEEECCEEEEECCSSSHHHHHHH
T ss_pred HHHHHHHHHHHhCCCHHHHhHHHHHHHHHHHHHHHHHHHHhcCccccCCcccccceEEEcCcceEEEECCCchHHHHHHH
Confidence 999999999999999999933599999999999999998877665442 2456788999999999
Q ss_pred -------------------------------------eEEEeeeCCccchhhhhhccccccEEEEecCcHHHHHHHHHHh
Q 011130 208 -------------------------------------GVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLAA 250 (493)
Q Consensus 208 -------------------------------------gvv~vv~~~~~~~~~~L~~~~~v~~v~fTGs~~~g~~v~~~a~ 250 (493)
|++|+|++.+.++++.|+.||+||+|+||||+.+|+.|++.++
T Consensus 181 ~~a~ALaaGNtVVlKPs~~tp~t~~~l~~l~~ealP~gv~nvv~g~~~~~g~~L~~~p~v~~V~FTGS~~~G~~i~~~aa 260 (498)
T 4f3x_A 181 KLAPAIGGGNTVVFKPSEQTPLTALKLARLIADILPEGVVNVITGRGETVGNALINHPKVGMVSITGDIATGKKVLAAAA 260 (498)
T ss_dssp HHHHHHHTTCEEEEECCTTCCHHHHHHHHHHHTTSCTTSEEECCCCTTTHHHHHHTCTTCCEEEEESCHHHHHHHHHHHH
T ss_pred HHHHHHHcCCeEEEECCcccHHHHHHHHHHHHHhCCcCeEEEEeCCchHHHHHHHhCCCcCEEEEECCHHHHHHHHHHHH
Confidence 9999999988889999999999999999999999999999999
Q ss_pred hcCCCceeEecCCCCceEEccCCCHHHHHHHHHHHHHhhcCCcccCCCeeEecchhHHHHHHHHHHHHhhcccCCCCCCC
Q 011130 251 KSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMKRVVGDPFKGG 330 (493)
Q Consensus 251 ~~~~~pv~lelgG~~p~iV~~daDl~~aa~~i~~~~~~~~GQ~C~a~~~v~V~~~i~d~f~~~l~~~~~~~~vg~p~~~~ 330 (493)
+ ++||+++|||||||+||++|||++.|++.+++++|.|+||.|++++|||||+++||+|+++|+++++++++|||.|++
T Consensus 261 ~-~~k~v~lElGGk~p~IV~~dADl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~vG~p~d~~ 339 (498)
T 4f3x_A 261 K-TVKRTHLELGGKAPVIVYGDADLEAVVNGIRTFGYYNAGQDCTAACRIYAEAGIYEKLVADLTSAVSTIRYNLDDDTE 339 (498)
T ss_dssp T-TTCEEEEECCCCEEEEECTTSCHHHHHHHHHHHTTGGGGCSTTCEEEEEEETTTHHHHHHHHHHHHTTCCCSCSSGGG
T ss_pred h-hCCceeecCCCCCcEEECCCCCHHHHHHHHHHHHHhcCCCCccCCceEEecHHHHHHHHHHHHHHHHhcccCCCcccc
Confidence 8 899999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CccccCCCHHHHHHHHHHHHHHHhCCC-EEEeCCcccCCCCceeeceEEecCCCCccccccccccceEEEEEeCCHHHHH
Q 011130 331 IQQGPQIDSEQFEKILKYIRSGVDGGA-KLETGGERLGAKGYYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYKDLDEVI 409 (493)
Q Consensus 331 ~~~gpli~~~~~~~~~~~i~~a~~~ga-~v~~gg~~~~~~g~~~~Ptvl~~~~~~~~i~~~E~fgPvl~v~~~~~~~eai 409 (493)
+++||++++.+++++.++|++++++|+ ++++||...+..|+|++|||+.+++++|++++||+||||++|++|+|+||||
T Consensus 340 ~~~Gpli~~~~~~~v~~~i~~a~~~Ga~~v~~gG~~~~~~g~~~~PTvl~~v~~~~~i~~eEiFGPVl~v~~~~~~deAi 419 (498)
T 4f3x_A 340 NEIGPLISRRQRDRVASFVERAADQKHIEITTGGRTGSDEGFFFQPTVVAGATQEDEIVRREVFGPVVSVTRFTGKDDAV 419 (498)
T ss_dssp CSSCCCSCHHHHHHHHHHHHHHHHSTTCEEEECCSBCCSSSCCBCCEEEESCCTTSHHHHSCCCSSEEEEEEECTTSCHH
T ss_pred CccccCcCHHHHHHHHHHHHHHHHCCCCEEEECCccCCCCCcEECCEEeecCCCCChhhCCceeCcEEEEEEeCCHHHHH
Confidence 999999999999999999999999999 9999998765689999999999999999999999999999999999999999
Q ss_pred HHHHcCCCCcEEEEecCCHHHHHHHHHhcceeEEEECCcCCCCCCCCccCCCCCCCCCcchHHHHHhhhhceEEEEeC
Q 011130 410 QRSNASQYGLAAGVFTHNLDTANTLMRALRVGSVWINCFDVFDAAIPFGGYKQSGQGREKGSYSLSNYLQVKAVVTAL 487 (493)
Q Consensus 410 ~~~n~~~~gl~a~v~t~d~~~~~~~~~~l~~g~V~VN~~~~~~~~~pfGG~~~SG~G~~~g~~~l~~~~~~k~v~~~~ 487 (493)
+++|+++|||+++|||+|.+.++++++++++|+||||+++...+.+||||+|+||+|+++|.+++++|++.|+|++++
T Consensus 420 ~~aN~~~~GL~a~v~t~d~~~a~~~a~~l~aG~V~vN~~~~~~~~~PfGG~k~SG~Gr~~G~~~l~~~t~~k~v~~~~ 497 (498)
T 4f3x_A 420 AWANDSDYGLASSVWTKDISKAMRAASRLQYGCTWINTHFMLTNEMPHGGIKQSGYGKDMSVYALEDYTAVRHIMINH 497 (498)
T ss_dssp HHHHSSSCCSEEEEECSBHHHHHHHHHHCCSSEEEESCCSCCCTTSCBCCSGGGEECCBSHHHHHHHTEEEEEEEEEC
T ss_pred HHHhcCCCCceEEEECCCHHHHHHHHHhCCcceEEEcCCCCCCCCCCcCCcCcCCcCccchHHHHHHhhceEEEEEeC
Confidence 999999999999999999999999999999999999998877899999999999999999999999999999998764
No 6
>3u4j_A NAD-dependent aldehyde dehydrogenase; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium, tetramer; 2.00A {Sinorhizobium meliloti}
Probab=100.00 E-value=4.8e-90 Score=730.79 Aligned_cols=425 Identities=43% Similarity=0.732 Sum_probs=404.0
Q ss_pred cccceeCCEeeeCCCCCeeeeecCCC-CCeEEEEecCCHHHHHHHHHHHHHHc--cCCCCCCCCHHHHHHHHHHHHHHHH
Q 011130 65 YTQLLINGQFVDSASGKTFPTLDPRT-GDVITHVAEGEAEDVNRAVSAARKAF--DEGPWPRMTAYERSKIILRFADLLE 141 (493)
Q Consensus 65 ~~~~~I~G~~~~~~~~~~~~v~~P~t-g~~i~~v~~~~~~~v~~av~~A~~A~--~~~~w~~~~~~~R~~iL~~la~~l~ 141 (493)
..++||||+|+.+.++++++++||+| |+++++++.++.+|+++|+++|++|| . .|+.++..+|.++|++++++|+
T Consensus 22 ~~~~~I~G~~~~~~~~~~~~v~nP~t~g~~i~~~~~~~~~dv~~av~aA~~A~~~~--~w~~~~~~~R~~~L~~~a~~l~ 99 (528)
T 3u4j_A 22 RYQMLVDGKSVDAASGSTIDRVSPGHAGEVVGTWPEASADDVRKAVAAARKAFDAG--PWPRMSGAERSRLMFKVADLIL 99 (528)
T ss_dssp BCCEEETTEEECCTTCCEEEEECTTSTTCEEEEEECCCHHHHHHHHHHHHHHHHTS--SGGGSCHHHHHHHHHHHHHHHH
T ss_pred ccceeECCEEecCCCCCEEEEeCCCCCCcEEEEEeCCCHHHHHHHHHHHHHhcccc--ccccCCHHHHHHHHHHHHHHHH
Confidence 45899999999887889999999999 99999999999999999999999999 6 8999999999999999999999
Q ss_pred HhHHHHHHHHHHHcCCChhhhhhccHHHHHHHHHHHHHhhHHhcCccCCCC-CCceeEEEeeeeeeE-------------
Q 011130 142 RHNDEIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADKIQGLTAPAD-GPYHVQTLHEPIGVA------------- 207 (493)
Q Consensus 142 ~~~~ela~~~~~e~Gk~~~~a~~~Ev~~~~~~l~~~a~~~~~~~~~~~~~~-~~~~~~~~~~PlGVv------------- 207 (493)
++.++|++++++|+|||..++. .|+..+++.++|++++++++.+...+.. .+...++.++|+|||
T Consensus 100 ~~~~ela~~~~~e~Gk~~~ea~-~ev~~~~~~l~~~a~~~~~~~~~~~~~~~~~~~~~~~~~P~GVV~~I~PwN~P~~~~ 178 (528)
T 3u4j_A 100 ARQEELALIESLEVGKPIAQAR-GEIGFCADLWSYAAGQARALEGQTHNNIGDDRLGLVLREPVGVVGIITPWNFPFIIA 178 (528)
T ss_dssp HTHHHHHHHHHHHHCCCHHHHH-HHHHHHHHHHHHHHHHHTTCCEEEECCSCTTEEEEEEEEECCEEEEECCSSSHHHHH
T ss_pred HHHHHHHHHHHHHhCCCHHHHH-HHHHHHHHHHHHHHHHHHHhcCeeeccCCCCceeEEEeccceEEEEECCCccHHHHH
Confidence 9999999999999999999995 5999999999999999988776655544 456789999999999
Q ss_pred ----------------------------------------eEEEeeeCCccchhhhhhccccccEEEEecCcHHHHHHHH
Q 011130 208 ----------------------------------------GVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQ 247 (493)
Q Consensus 208 ----------------------------------------gvv~vv~~~~~~~~~~L~~~~~v~~v~fTGs~~~g~~v~~ 247 (493)
|++|+|++.+.++++.|+.||+||+|+||||+.+|+.|++
T Consensus 179 ~~~~a~ALaaGN~VVlKps~~tp~t~~~l~~l~~eaGlP~gvv~vv~g~~~~~g~~L~~~p~vd~I~FTGS~~~G~~i~~ 258 (528)
T 3u4j_A 179 SERVPWAIGSGCTVVLKPSEFTSGTSIRLAELAREAGIPDGVFNVVTGYGDPAGQVLAEDPNVDMVAFTGSVRVGTKLGE 258 (528)
T ss_dssp HHHHHHHHHTTCEEEEECCTTCCHHHHHHHHHHHHHTCCTTSEEECCCSSTTHHHHHHHCTTCCEEEEESCHHHHHHHHH
T ss_pred HHHHHHHHHcCCeEEEEcCCccHHHHHHHHHHHHHhCCCCCeEEEEeCCcHHHHHHHHhCCCcCEEEEeCCHHHHHHHHH
Confidence 8999999988889999999999999999999999999999
Q ss_pred HHhhcCCCceeEecCCCCceEEccCCCHHHHHHHHHHHHHhhcCCcccCCCeeEecchhHHHHHHHHHHHHhhcccCCCC
Q 011130 248 LAAKSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMKRVVGDPF 327 (493)
Q Consensus 248 ~a~~~~~~pv~lelgG~~p~iV~~daDl~~aa~~i~~~~~~~~GQ~C~a~~~v~V~~~i~d~f~~~l~~~~~~~~vg~p~ 327 (493)
.+++ ++||+++|||||||+||++|||+|.|++.+++++|.|+||.|++++|||||++++|+|+++|+++++++++|||.
T Consensus 259 ~aa~-~lk~v~lELGGk~p~iV~~dADl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~~G~p~ 337 (528)
T 3u4j_A 259 IAAR-TVKRVGLELGGKGPQIVFADADLDAAADGIAYGVYHNAGQCCISGSRLLVQEGIRDALMERLLDISRKVAFGDPL 337 (528)
T ss_dssp HHHT-TTCEEEEECCCCEEEEECTTSCHHHHHHHHHHHHHGGGGCCTTCEEEEEEEGGGHHHHHHHHHHHHHHCCEECTT
T ss_pred HHHh-cCCceEEecCCCCeeEECCCCCHHHHHHHHHHHHhhcCCCCCcCCCEEEEechHHHHHHHHHHHHHHhhcCCCCC
Confidence 9988 899999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCccccCCCHHHHHHHHHHHHHHHhCCCEEEeCCcccCC-CCceeeceEEecCCCCccccccccccceEEEEEeCCHH
Q 011130 328 KGGIQQGPQIDSEQFEKILKYIRSGVDGGAKLETGGERLGA-KGYYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYKDLD 406 (493)
Q Consensus 328 ~~~~~~gpli~~~~~~~~~~~i~~a~~~ga~v~~gg~~~~~-~g~~~~Ptvl~~~~~~~~i~~~E~fgPvl~v~~~~~~~ 406 (493)
++++++||++++.+++++.++|++++++|+++++||..... .|+|++|||+.+++++|++++||+||||++|++|+|+|
T Consensus 338 ~~~~~~Gpli~~~~~~rv~~~i~~a~~~Ga~v~~gG~~~~~~~g~~~~PTvl~~v~~~~~i~~eEiFGPVl~v~~~~~~d 417 (528)
T 3u4j_A 338 NERTKIGAMISEAHAEKVHSYVTAGITSGAELLLGGERIGREAGLYYAPTVFAGVTPDMSIAREEIFGPVLSTLTFKTAD 417 (528)
T ss_dssp STTCSBCCCSCHHHHHHHHHHHHHHHHTTCEEEECCSEECTTTSCEECCEEEESCCTTSHHHHSCCCSSEEEEEEESSHH
T ss_pred CcCCccCCccCHHHHHHHHHHHHHHHHCCCEEEeCCCcCCCCCCcEecceEEecCCCCCccccceeeccEEEEEEeCCHH
Confidence 99999999999999999999999999999999999986544 79999999999999999999999999999999999999
Q ss_pred HHHHHHHcCCCCcEEEEecCCHHHHHHHHHhcceeEEEECCcCCCCCCCCccCCCCCCCCCcchHHHHHhhhhceEEEEe
Q 011130 407 EVIQRSNASQYGLAAGVFTHNLDTANTLMRALRVGSVWINCFDVFDAAIPFGGYKQSGQGREKGSYSLSNYLQVKAVVTA 486 (493)
Q Consensus 407 eai~~~n~~~~gl~a~v~t~d~~~~~~~~~~l~~g~V~VN~~~~~~~~~pfGG~~~SG~G~~~g~~~l~~~~~~k~v~~~ 486 (493)
|||+++|+++|||+++|||+|.++++++++++++|+||||+++...+.+||||+|+||+|+++|.+++++|++.|+|++.
T Consensus 418 eAi~~aN~~~~GL~a~v~t~d~~~a~~~~~~l~aG~V~vN~~~~~~~~~PfGG~k~SG~Gr~~G~~gl~~ft~~K~v~~~ 497 (528)
T 3u4j_A 418 EAVALANATEFGLSASVWSTNLETALQTIRRIRAGRCWINSVIDGTPELPIGGYKKSGLGRELGRYGFDEYSQFKGVHVT 497 (528)
T ss_dssp HHHHHHHCSSCCSEEEEECSBHHHHHHHHHHSCCSEEEESCCSCCCTTSCBCCSGGGEESCBSTTHHHHHTEEEEEEEEE
T ss_pred HHHHHHhcCCCCcEEEEEcCCHHHHHHHHHhCCeeEEEECCCCCCCCCCCcCCcCcCCCCcCchHHHHHHhhceEEEEEe
Confidence 99999999999999999999999999999999999999999888889999999999999999999999999999999988
Q ss_pred CC-CCCCC
Q 011130 487 LK-NPAWL 493 (493)
Q Consensus 487 ~~-~~~~~ 493 (493)
.. ..+||
T Consensus 498 ~~~~~~~~ 505 (528)
T 3u4j_A 498 LGRPAPWF 505 (528)
T ss_dssp SSCCCCSC
T ss_pred CCCCCCcc
Confidence 64 22454
No 7
>1bxs_A Aldehyde dehydrogenase; retinal, class 1, tetramer, NAD, cytosolic, oxidoreductase; HET: NAD; 2.35A {Ovis aries} SCOP: c.82.1.1 PDB: 1o9j_A* 1bi9_A*
Probab=100.00 E-value=9.8e-90 Score=724.76 Aligned_cols=422 Identities=53% Similarity=0.921 Sum_probs=399.2
Q ss_pred ccceeCCEeeeCCCCCeeeeecCCCCCeEEEEecCCHHHHHHHHHHHHHHccCC-CCCCCCHHHHHHHHHHHHHHHHHhH
Q 011130 66 TQLLINGQFVDSASGKTFPTLDPRTGDVITHVAEGEAEDVNRAVSAARKAFDEG-PWPRMTAYERSKIILRFADLLERHN 144 (493)
Q Consensus 66 ~~~~I~G~~~~~~~~~~~~v~~P~tg~~i~~v~~~~~~~v~~av~~A~~A~~~~-~w~~~~~~~R~~iL~~la~~l~~~~ 144 (493)
.++||||+|+.+.++++++++||+||+++++++.++.+|+++++++|++||++| .|++++..+|.++|++++++|++|.
T Consensus 21 ~~~~i~G~~~~~~~~~~~~v~nP~tg~~i~~~~~~~~~~v~~av~~A~~A~~~~~~w~~~~~~~R~~~L~~~a~~l~~~~ 100 (501)
T 1bxs_A 21 TKIFINNEWHSSVSGKKFPVFNPATEEKLCEVEEGDKEDVDKAVKAARQAFQIGSPWRTMDASERGRLLNKLADLIERDR 100 (501)
T ss_dssp CSEEETTEEECCTTCCEEEEECTTTCCEEEEEECCCHHHHHHHHHHHHHHTSTTSHHHHSCHHHHHHHHHHHHHHHHHTH
T ss_pred cCeeECCEEecCCCCCeEEEECCCCCCEEEEEeCCCHHHHHHHHHHHHHHhhcccchhhCCHHHHHHHHHHHHHHHHHHH
Confidence 468999999987677899999999999999999999999999999999999743 6999999999999999999999999
Q ss_pred HHHHHHHHHHcCCChhhhhhccHHHHHHHHHHHHHhhHHhcCccCCCCCCceeEEEeeeeeeE-----------------
Q 011130 145 DEIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADKIQGLTAPADGPYHVQTLHEPIGVA----------------- 207 (493)
Q Consensus 145 ~ela~~~~~e~Gk~~~~a~~~Ev~~~~~~l~~~a~~~~~~~~~~~~~~~~~~~~~~~~PlGVv----------------- 207 (493)
++|++++++|+|||+.++...|+..+++.++|++++++++.+...+...+...++.++|+|||
T Consensus 101 ~ela~~~~~e~Gk~~~e~~~~ev~~~~~~~~~~a~~~~~~~g~~~~~~~~~~~~~~~~P~GVV~~I~PwN~P~~~~~~~~ 180 (501)
T 1bxs_A 101 LLLATMEAMNGGKLFSNAYLMDLGGCIKTLRYCAGWADKIQGRTIPMDGNFFTYTRSEPVGVCGQIIPWNFPLLMFLWKI 180 (501)
T ss_dssp HHHHHHHHHHHTCCHHHHHHTHHHHHHHHHHHHHHHGGGCCEEEECCSSSEEEEEEEEECCEEEEECCSSSHHHHHHHHH
T ss_pred HHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHhhCCeeeccCCcceeEEecCCceEEEECCCcchHHHHHHHH
Confidence 999999999999999987656999999999999999988776654444455678999999999
Q ss_pred ------------------------------------eEEEeeeCCccchhhhhhccccccEEEEecCcHHHHHHHHHHh-
Q 011130 208 ------------------------------------GVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLAA- 250 (493)
Q Consensus 208 ------------------------------------gvv~vv~~~~~~~~~~L~~~~~v~~v~fTGs~~~g~~v~~~a~- 250 (493)
|++|+|++.+.++++.|+.||+||+|+||||+.+|+.|++.++
T Consensus 181 a~ALaaGN~VVlKps~~tp~t~~~l~~l~~~aGlP~gv~~vv~g~~~~~g~~L~~~~~v~~I~FTGS~~~G~~i~~~aa~ 260 (501)
T 1bxs_A 181 GPALSCGNTVVVKPAEQTPLTALHMGSLIKEAGFPPGVVNIVPGYGPTAGAAISSHMDVDKVAFTGSTEVGKLIKEAAGK 260 (501)
T ss_dssp HHHHHTTCEEEEECCTTCCHHHHHHHHHHHHHTCCTTSEEECCSCTTTHHHHHHTCTTCSEEEEESCHHHHHHHHHHHHH
T ss_pred HHHHHcCCeeeccCCCccHHHHHHHHHHHHHhCCCcceEEEEecCchHHHHHHHhCCCcCEEEEECCHHHHHHHHHHhhh
Confidence 8999999988889999999999999999999999999999998
Q ss_pred hcCCCceeEecCCCCceEEccCCCHHHHHHHHHHHHHhhcCCcccCCCeeEecchhHHHHHHHHHHHHhhcccCCCCCCC
Q 011130 251 KSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMKRVVGDPFKGG 330 (493)
Q Consensus 251 ~~~~~pv~lelgG~~p~iV~~daDl~~aa~~i~~~~~~~~GQ~C~a~~~v~V~~~i~d~f~~~l~~~~~~~~vg~p~~~~ 330 (493)
+ ++||+++|||||||+||++|||++.|++.+++++|.|+||.|++++|||||++++|+|+++|+++++++++|||.|++
T Consensus 261 ~-~l~~v~lELGGk~p~iV~~dADl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~~G~p~~~~ 339 (501)
T 1bxs_A 261 S-NLKRVSLELGGKSPCIVFADADLDNAVEFAHQGVFYHQGQCCIAASRLFVEESIYDEFVRRSVERAKKYVLGNPLTPG 339 (501)
T ss_dssp T-TCCEEEEECCCCCEEEECTTSCHHHHHHHHHHHHHTTTTCCTTCCCEEEEEHHHHHHHHHHHHHHHTCCCBSCTTSTT
T ss_pred c-cCCcEEEecCCcCeEEECCCCCHHHHHHHHHHHHHhcCCCCCCCCCEEEEchhHHHHHHHHHHHHHHhcCCCCCcccC
Confidence 6 899999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CccccCCCHHHHHHHHHHHHHHHhCCCEEEeCCcccCCCCceeeceEEecCCCCccccccccccceEEEEEeCCHHHHHH
Q 011130 331 IQQGPQIDSEQFEKILKYIRSGVDGGAKLETGGERLGAKGYYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYKDLDEVIQ 410 (493)
Q Consensus 331 ~~~gpli~~~~~~~~~~~i~~a~~~ga~v~~gg~~~~~~g~~~~Ptvl~~~~~~~~i~~~E~fgPvl~v~~~~~~~eai~ 410 (493)
+++||++++.+++++.++|++++++|+++++||...+..|+|++|||+.+++++|++++||+||||++|++|+|+||||+
T Consensus 340 ~~~Gpli~~~~~~rv~~~i~~a~~~Ga~~~~gG~~~~~~g~~~~PTvl~~v~~~~~i~~eEiFGPVl~v~~~~~~deAi~ 419 (501)
T 1bxs_A 340 VSQGPQIDKEQYEKILDLIESGKKEGAKLECGGGPWGNKGYFIQPTVFSDVTDDMRIAKEEIFGPVQQIMKFKSLDDVIK 419 (501)
T ss_dssp CCBCCCSCHHHHHHHHHHHHHHHHTTCEECSCCSEECSSSCEECCEEEESCCTTSHHHHSCCCSSEEEEEEECCHHHHHH
T ss_pred CccCCCcCHHHHHHHHHHHHHHHhCCCEEEeCCccCCCCCCeeCCEEEecCCCCCHHHhcccccceEEEEEeCCHHHHHH
Confidence 99999999999999999999999999999999976544699999999999999999999999999999999999999999
Q ss_pred HHHcCCCCcEEEEecCCHHHHHHHHHhcceeEEEECCcCCCCCCCCccCCCCCCCCCcchHHHHHhhhhceEEEEeCC
Q 011130 411 RSNASQYGLAAGVFTHNLDTANTLMRALRVGSVWINCFDVFDAAIPFGGYKQSGQGREKGSYSLSNYLQVKAVVTALK 488 (493)
Q Consensus 411 ~~n~~~~gl~a~v~t~d~~~~~~~~~~l~~g~V~VN~~~~~~~~~pfGG~~~SG~G~~~g~~~l~~~~~~k~v~~~~~ 488 (493)
++|+++|||+++|||+|.+.++++++++++|+||||+++...+.+||||+|.||+|+++|.+++++|++.|+|++++.
T Consensus 420 ~aN~~~~gL~a~v~t~d~~~a~~~~~~l~aG~V~iN~~~~~~~~~pfGG~k~SG~G~~~G~~~l~~f~~~K~v~~~~~ 497 (501)
T 1bxs_A 420 RANNTFYGLSAGIFTNDIDKAITVSSALQSGTVWVNCYSVVSAQCPFGGFKMSGNGRELGEYGFHEYTEVKTVTIKIS 497 (501)
T ss_dssp HHHCSSCCSEEEEECSBHHHHHHHHHHSCCSEEEESCCCCCCTTSCBCCSGGGEESCBSHHHHHHTTEEEEEEEEECS
T ss_pred HHhcCCCCeeEEEEcCCHHHHHHHHHhcCeeEEEECCCCCCCCCCCCCCcCcCCcCccchHHHHHHhhCeeEEEEccC
Confidence 999999999999999999999999999999999999987777899999999999999999999999999999988753
No 8
>3iwj_A Putative aminoaldehyde dehydrogenase; rossmann fold, dimer, betaine aldehyde dehydrogenase, NAD, oxidoreductase; HET: NAD; 2.15A {Pisum sativum} SCOP: c.82.1.0 PDB: 3iwk_A* 4a0m_A*
Probab=100.00 E-value=1.3e-89 Score=725.37 Aligned_cols=429 Identities=38% Similarity=0.697 Sum_probs=402.9
Q ss_pred CccccceeCCEeeeCCCCCeeeeecCCCCCeEEEEecCCHHHHHHHHHHHHHHccCC---CCCCCCHHHHHHHHHHHHHH
Q 011130 63 VDYTQLLINGQFVDSASGKTFPTLDPRTGDVITHVAEGEAEDVNRAVSAARKAFDEG---PWPRMTAYERSKIILRFADL 139 (493)
Q Consensus 63 ~~~~~~~I~G~~~~~~~~~~~~v~~P~tg~~i~~v~~~~~~~v~~av~~A~~A~~~~---~w~~~~~~~R~~iL~~la~~ 139 (493)
+...++||||+|+.+.++++++++||+||+++++++.++.+|+++|+++|++||+++ .|++++..+|.++|++++++
T Consensus 5 ~~~~~~~i~g~~~~~~~~~~~~~~nP~tg~~i~~~~~~~~~~v~~av~~A~~A~~~~~~~~w~~~~~~~R~~~L~~~a~~ 84 (503)
T 3iwj_A 5 IPTRQLFINGDWKAPVLNKRIPVINPATQNIIGDIPAATKEDVDVAVAAAKTALTRNKGADWATASGAVRARYLRAIAAK 84 (503)
T ss_dssp CCCCCEEETTEEECCTTCCEEEEECTTTCCEEEEEECCCHHHHHHHHHHHHHHHHGGGGTTTTSSCHHHHHHHHHHHHHH
T ss_pred CCCCceeECCEEecCCCCCeEEeECCCCCCEEEEEcCCCHHHHHHHHHHHHHHhhhcCCcchhhCCHHHHHHHHHHHHHH
Confidence 344578999999988788999999999999999999999999999999999999743 79999999999999999999
Q ss_pred HHHhHHHHHHHHHHHcCCChhhhhhccHHHHHHHHHHHHHhhHHhcCccC-C---CCCCceeEEEeeeeeeE--------
Q 011130 140 LERHNDEIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADKIQGLTA-P---ADGPYHVQTLHEPIGVA-------- 207 (493)
Q Consensus 140 l~~~~~ela~~~~~e~Gk~~~~a~~~Ev~~~~~~l~~~a~~~~~~~~~~~-~---~~~~~~~~~~~~PlGVv-------- 207 (493)
|++|.++|++++++|+|||+.++.. |+..+++.++|++.+++++.+... + ...+...++.++|+|||
T Consensus 85 l~~~~~ela~~~~~e~Gk~~~ea~~-ev~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~PwN~ 163 (503)
T 3iwj_A 85 VTEKKPELAKLESIDCGKPLDEAAW-DIDDVAGCFEYYADLAEKLDARQKAPVSLPMDTFKSHVLREPIGVVGLITPWNY 163 (503)
T ss_dssp HHHTHHHHHHHHHHHHCCCHHHHHH-HHHHHHHHHHHHHHHHHHHHHHTTEEECCSCTTEEEEEEEEECCEEEEECCSSS
T ss_pred HHHHHHHHHHHHHHHhCCCHHHHHH-HHHHHHHHHHHHHHHHHHhcCCccccccccCCCccceEEEcCCceEEEECCCch
Confidence 9999999999999999999999975 999999999999999887765431 1 11346788999999999
Q ss_pred ---------------------------------------------eEEEeeeCCccchhhhhhccccccEEEEecCcHHH
Q 011130 208 ---------------------------------------------GVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTG 242 (493)
Q Consensus 208 ---------------------------------------------gvv~vv~~~~~~~~~~L~~~~~v~~v~fTGs~~~g 242 (493)
|++|+|++.+.++++.|+.||+||+|+||||+.+|
T Consensus 164 P~~~~~~~~~~ALaaGN~VVlKps~~tp~t~~~l~~l~~~aGlP~gvv~vv~g~~~~~g~~L~~~~~v~~I~FTGS~~~G 243 (503)
T 3iwj_A 164 PMLMATWKVAPALAAGCAAILKPSELASLTCLELGEICKEVGLPPGVLNILTGLGPEAGAPLATHPDVDKVAFTGSSATG 243 (503)
T ss_dssp HHHHHHHHHHHHHHTTCEEEEECCTTSCHHHHHHHHHHHHHTCCTTSEEECCSCHHHHTHHHHTCTTCCEEEEESCHHHH
T ss_pred HHHHHHHHHHHHHhcCCeEEEECCCcchHHHHHHHHHHHHhCcCcCeEEEEeCCcHHHHHHHhhCCCccEEEEECcHHHH
Confidence 89999999888899999999999999999999999
Q ss_pred HHHHHHHhhcCCCceeEecCCCCceEEccCCCHHHHHHHHHHHHHhhcCCcccCCCeeEecchhHHHHHHHHHHHHhhcc
Q 011130 243 KIVLQLAAKSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMKRV 322 (493)
Q Consensus 243 ~~v~~~a~~~~~~pv~lelgG~~p~iV~~daDl~~aa~~i~~~~~~~~GQ~C~a~~~v~V~~~i~d~f~~~l~~~~~~~~ 322 (493)
+.|++.++. ++||+++|||||||+||++|||++.|++.+++++|.|+||.|++++|||||+++||+|+++|++++++++
T Consensus 244 ~~i~~~aa~-~l~~v~lElGGk~p~iV~~dADl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~ 322 (503)
T 3iwj_A 244 SKIMTAAAQ-LVKPVSLELGGKSPLVVFEDVDLDKAAEWAIFGCFWTNGQICSATSRLILHESIATEFLNRIVKWIKNIK 322 (503)
T ss_dssp HHHHHHHGG-GTCCEEEECCCCEEEEECSSSCHHHHHHHHHHHHTGGGGCCTTCEEEEEEETTTHHHHHHHHHHHHHTCC
T ss_pred HHHHHHHhc-CCCCEEEECCCCCceEEcCCCCHHHHHHHHHHHHHhcCCCCcccCCeeEEcHHHHHHHHHHHHHHHHhcc
Confidence 999999988 8999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cCCCCCCCCccccCCCHHHHHHHHHHHHHHHhCCCEEEeCCcccC--CCCceeeceEEecCCCCccccccccccceEEEE
Q 011130 323 VGDPFKGGIQQGPQIDSEQFEKILKYIRSGVDGGAKLETGGERLG--AKGYYIKPTVFTGVKDDMLIAKDEIFGPVQSIL 400 (493)
Q Consensus 323 vg~p~~~~~~~gpli~~~~~~~~~~~i~~a~~~ga~v~~gg~~~~--~~g~~~~Ptvl~~~~~~~~i~~~E~fgPvl~v~ 400 (493)
+|||.++++++||++++.+++++.++|++++++|+++++||...+ ..|+|++|||+.+++++|++++||+||||++|+
T Consensus 323 ~g~p~~~~~~~gpli~~~~~~~v~~~i~~a~~~Ga~v~~gG~~~~~~~~g~~~~PTvl~~v~~~~~i~~eEiFGPVl~v~ 402 (503)
T 3iwj_A 323 ISDPLEEGCRLGPVVSEGQYEKILKFVSNAKSEGATILTGGSRPEHLKKGFFIEPTIITDVTTNMQIWREEVFGPVLCVK 402 (503)
T ss_dssp BSCTTSTTCCBCCCSCHHHHHHHHHHHHHHHHTTCEEEECCSCCTTCCSSSCCCCEEEESCCTTSHHHHSCCCSSEEEEE
T ss_pred CCCCCCCCCcccCccCHHHHHHHHHHHHHHHHCCCEEEecCCCCccCCCCceeCCeeeecCCCCchhhCceeeCceEEEE
Confidence 999999999999999999999999999999999999999997654 579999999999999999999999999999999
Q ss_pred EeCCHHHHHHHHHcCCCCcEEEEecCCHHHHHHHHHhcceeEEEECCcCCCCCCCCccCCCCCCCCCcchHHHHHhhhhc
Q 011130 401 KYKDLDEVIQRSNASQYGLAAGVFTHNLDTANTLMRALRVGSVWINCFDVFDAAIPFGGYKQSGQGREKGSYSLSNYLQV 480 (493)
Q Consensus 401 ~~~~~~eai~~~n~~~~gl~a~v~t~d~~~~~~~~~~l~~g~V~VN~~~~~~~~~pfGG~~~SG~G~~~g~~~l~~~~~~ 480 (493)
+|+|+||||+++|+++|||+++|||+|.+.++++++++++|+|+||+++...+.+||||+|+||+|+++|.+++++|++.
T Consensus 403 ~~~~~deAi~~aN~~~~gL~a~v~t~d~~~a~~~~~~l~aG~v~iN~~~~~~~~~PfGG~k~SG~G~~~G~~g~~~f~~~ 482 (503)
T 3iwj_A 403 TFSTEEEAIDLANDTVYGLGAAVISNDLERCERVTKAFKAGIVWVNCSQPCFTQAPWGGVKRSGFGRELGEWGLDNYLSV 482 (503)
T ss_dssp EESSHHHHHHHHTCSSCCSEEEEECSCHHHHHHHHHHCCSSEEEESSSCCCCTTSCBCCSGGGEECCBSHHHHHHTTEEE
T ss_pred EeCCHHHHHHHHhCCCCCcEEEEECCCHHHHHHHHHhCCcceEEEcCCCCCCCCCCcCCcCcccCCCcchHHHHHHhhCe
Confidence 99999999999999999999999999999999999999999999999877788999999999999999999999999999
Q ss_pred eEEEEeCCC--CCCC
Q 011130 481 KAVVTALKN--PAWL 493 (493)
Q Consensus 481 k~v~~~~~~--~~~~ 493 (493)
|+|++.+.. +.||
T Consensus 483 k~v~~~~~~~~~~~~ 497 (503)
T 3iwj_A 483 KQVTQYISEEPWGWY 497 (503)
T ss_dssp EEEEEECCSSCCCCS
T ss_pred EEEEEeCCCCccccc
Confidence 999998643 3464
No 9
>2o2p_A Formyltetrahydrofolate dehydrogenase; aldehyde dehydrogenase, FDH, oxidoreductase; 1.70A {Rattus norvegicus} PDB: 2o2q_A* 2o2r_A* 3rho_A* 3rhm_A* 3rhj_A* 3rhq_A* 3rhp_A* 3rhr_A* 3rhl_A*
Probab=100.00 E-value=4.9e-90 Score=729.02 Aligned_cols=420 Identities=42% Similarity=0.778 Sum_probs=397.0
Q ss_pred ccceeCCEeeeCCCCCeeeeecCCCCCeEEEEecCCHHHHHHHHHHHHHHccCCCCCCCCHHHHHHHHHHHHHHHHHhHH
Q 011130 66 TQLLINGQFVDSASGKTFPTLDPRTGDVITHVAEGEAEDVNRAVSAARKAFDEGPWPRMTAYERSKIILRFADLLERHND 145 (493)
Q Consensus 66 ~~~~I~G~~~~~~~~~~~~v~~P~tg~~i~~v~~~~~~~v~~av~~A~~A~~~~~w~~~~~~~R~~iL~~la~~l~~~~~ 145 (493)
.++||||+|+.+.++++++++||+||++|++++.++.+|+++||++|++||+.|.|+++|..+|.++|++++++|+++.+
T Consensus 37 ~~~~I~G~~~~~~~~~~~~v~nP~tg~~i~~v~~a~~~dv~~av~aA~~A~~~g~w~~~~~~~R~~~L~~~a~~l~~~~~ 116 (517)
T 2o2p_A 37 YQLFIGGEFVDAEGSKTYNTINPTDGSVICQVSLAQVSDVDKAVAAAKEAFENGLWGKINARDRGRLLYRLADVMEQHQE 116 (517)
T ss_dssp CSEEETTEEECCGGGCEEEEECTTTCCEEEEEECCCHHHHHHHHHHHHHHHHTSGGGTSCHHHHHHHHHHHHHHHHHTHH
T ss_pred CCeEECCEEecCCCCCeEEEECCCCCCEEEEEeCCCHHHHHHHHHHHHHhcccCccccCCHHHHHHHHHHHHHHHHHhHH
Confidence 36899999998666789999999999999999999999999999999999986569999999999999999999999999
Q ss_pred HHHHHHHHHcCCChhhhhhccHHHHHHHHHHHHHhhHHhcCccCCC----CCCceeEEEeeeeeeE--------------
Q 011130 146 EIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADKIQGLTAPA----DGPYHVQTLHEPIGVA-------------- 207 (493)
Q Consensus 146 ela~~~~~e~Gk~~~~a~~~Ev~~~~~~l~~~a~~~~~~~~~~~~~----~~~~~~~~~~~PlGVv-------------- 207 (493)
+|++++++|+|||+.+++..|+..+++.++|++++++++.+...+. ......++.++|+|||
T Consensus 117 ela~~~~~e~Gk~~~ea~~~Ev~~~~~~~~~~a~~~~~~~g~~~~~~~~~~~~~~~~~~~~P~GVV~~I~PwN~P~~~~~ 196 (517)
T 2o2p_A 117 ELATIEALDAGAVYTLALKTHVGMSIQTFRYFAGWCDKIQGATIPINQARPNRNLTLTKKEPVGVCGIVIPWNYPLMMLS 196 (517)
T ss_dssp HHHHHHHHHHCCCHHHHHHTTTHHHHHHHHHHHHHGGGCCEEEECCCCCTTSCEEEEEEEEECCEEEEECCSSSHHHHHH
T ss_pred HHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHhcCccccccccCCCCceEEEEecCCccEEEECCCcchHHHHH
Confidence 9999999999999999874599999999999999998876655443 2233578999999999
Q ss_pred ---------------------------------------eEEEeeeCCccchhhhhhccccccEEEEecCcHHHHHHHHH
Q 011130 208 ---------------------------------------GVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQL 248 (493)
Q Consensus 208 ---------------------------------------gvv~vv~~~~~~~~~~L~~~~~v~~v~fTGs~~~g~~v~~~ 248 (493)
|++|+|++.+.++++.|+.||+||+|+||||+.+|+.|++.
T Consensus 197 ~~~a~ALaaGNtVVlKps~~tp~ta~~l~~l~~eaGlP~gvv~vv~g~g~~~g~~L~~~~~v~~V~FTGS~~~G~~I~~~ 276 (517)
T 2o2p_A 197 WKTAACLAAGNTVVIKPAQVTPLTALKFAELTLKAGIPKGVVNILPGSGSLVGQRLSDHPDVRKIGFTGSTEVGKHIMKS 276 (517)
T ss_dssp HHHHHHHHTTCEEEEECCTTCCHHHHHHHHHHHHTTCCTTSEEECCSCHHHHHHHHHHCTTCCEEEEESCHHHHHHHHHH
T ss_pred HHHHHHHHcCCEEEEECCCccHHHHHHHHHHHHHhCCCcCeEEEEeCCCHHHHHHHHhCCCCCEEEEECCHHHHHHHHHH
Confidence 99999999877889999999999999999999999999999
Q ss_pred Hh-hcCCCceeEecCCCCceEEccCCCHHHHHHHHHHHHHhhcCCcccCCCeeEecchhHHHHHHHHHHHHhhcccCCCC
Q 011130 249 AA-KSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMKRVVGDPF 327 (493)
Q Consensus 249 a~-~~~~~pv~lelgG~~p~iV~~daDl~~aa~~i~~~~~~~~GQ~C~a~~~v~V~~~i~d~f~~~l~~~~~~~~vg~p~ 327 (493)
++ + ++||+++|||||||+||++|||++.|++.+++++|.|+||.|++++|||||+++||+|+++|+++++++++|||+
T Consensus 277 aa~~-~lk~v~lELGGk~p~IV~~dADl~~Aa~~i~~~~f~n~GQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~~~vGdp~ 355 (517)
T 2o2p_A 277 CALS-NVKKVSLELGGKSPLIIFADCDLNKAVQMGMSSVFFNKGENCIAAGRLFVEESIHNQFVQKVVEEVEKMKIGNPL 355 (517)
T ss_dssp HHHH-TCCEEEEECCCCEEEEECTTSCHHHHHHHHHHHHHGGGGCCTTCEEEEEEEHHHHHHHHHHHHHHHTTCCBSCTT
T ss_pred hHHh-cCCeEEEECCCcCeEEECCCCCHHHHHHHHHHHHHhcCCCCCcCCeEEEEeHHHHHHHHHHHHHHHHhcCCCCCC
Confidence 98 7 899999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCccccCCCHHHHHHHHHHHHHHHhCCCEEEeCCcccCCCCceeeceEEecCCCCccccccccccceEEEEEeCC--H
Q 011130 328 KGGIQQGPQIDSEQFEKILKYIRSGVDGGAKLETGGERLGAKGYYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYKD--L 405 (493)
Q Consensus 328 ~~~~~~gpli~~~~~~~~~~~i~~a~~~ga~v~~gg~~~~~~g~~~~Ptvl~~~~~~~~i~~~E~fgPvl~v~~~~~--~ 405 (493)
|+++++||+++..+++++.++|++++++|+++++||......|+|++||||.+++++|++++||+||||++|++|+| +
T Consensus 356 ~~~~~~Gpli~~~~~~~v~~~i~~a~~~Ga~~~~gG~~~~~~g~~~~PTvl~~v~~~~~i~~eEiFGPVl~v~~~~~~~~ 435 (517)
T 2o2p_A 356 ERDTNHGPQNHEAHLRKLVEYCQRGVKEGATLVCGGNQVPRPGFFFQPTVFTDVEDHMYIAKEESFGPIMIISRFADGDV 435 (517)
T ss_dssp STTCCBCCCSSHHHHHHHHHHHHHHHHTTCEEEECCSBCSSSSCCBCCEEEESCCTTSGGGTSCCCSSEEEEEEECTTCS
T ss_pred CCCCccCCCcCHHHHHHHHHHHHHHHHCCCEEEeccccCCCCCCeECCEEEeCCCCCChhhhccccccEEEEEEcCCCCH
Confidence 99999999999999999999999999999999999986544699999999999999999999999999999999999 9
Q ss_pred HHHHHHHHcCCCCcEEEEecCCHHHHHHHHHhcceeEEEECCcCCCCCCCCccCCCCCCCCCcchHHHHHhhhhceEEEE
Q 011130 406 DEVIQRSNASQYGLAAGVFTHNLDTANTLMRALRVGSVWINCFDVFDAAIPFGGYKQSGQGREKGSYSLSNYLQVKAVVT 485 (493)
Q Consensus 406 ~eai~~~n~~~~gl~a~v~t~d~~~~~~~~~~l~~g~V~VN~~~~~~~~~pfGG~~~SG~G~~~g~~~l~~~~~~k~v~~ 485 (493)
||||+++|+++|||+++|||+|.+.++++++++++|+||||+++...+.+||||+|+||+|+++|.+++++|++.|+|++
T Consensus 436 deAi~~aN~~~~GL~a~v~t~d~~~a~~~~~~l~aG~V~iN~~~~~~~~~PfGG~k~SG~Gr~~G~~~l~~~~~~k~v~~ 515 (517)
T 2o2p_A 436 DAVLSRANATEFGLASGVFTRDINKALYVSDKLQAGTVFINTYNKTDVAAPFGGFKQSGFGKDLGEAALNEYLRIKTVTF 515 (517)
T ss_dssp HHHHHHHTCSSCCSCCEEECSBHHHHHHHHHHCCSSEEEESCSSCCCTTSCBCCCGGGEECCBSHHHHHHTTEEEEEEEE
T ss_pred HHHHHHHhcCCCCceEEEeCCCHHHHHHHHHhcCEeEEEECCCCCCCCCCCcCCcCcCCcCccChHHHHHHhCCceEEEe
Confidence 99999999999999999999999999999999999999999987778899999999999999999999999999999987
Q ss_pred e
Q 011130 486 A 486 (493)
Q Consensus 486 ~ 486 (493)
+
T Consensus 516 ~ 516 (517)
T 2o2p_A 516 E 516 (517)
T ss_dssp E
T ss_pred e
Confidence 5
No 10
>3ek1_A Aldehyde dehydrogenase; ssgcid, oxidoreductase, structural genomics; HET: MES; 2.10A {Brucella melitensis biovar ABORTUS2308}
Probab=100.00 E-value=2.8e-90 Score=728.68 Aligned_cols=417 Identities=37% Similarity=0.620 Sum_probs=398.3
Q ss_pred cccceeCCEeeeCCCCCeeeeecCCCCCeEEEEecCCHHHHHHHHHHHHHHccCCCCCCCCHHHHHHHHHHHHHHHHHhH
Q 011130 65 YTQLLINGQFVDSASGKTFPTLDPRTGDVITHVAEGEAEDVNRAVSAARKAFDEGPWPRMTAYERSKIILRFADLLERHN 144 (493)
Q Consensus 65 ~~~~~I~G~~~~~~~~~~~~v~~P~tg~~i~~v~~~~~~~v~~av~~A~~A~~~~~w~~~~~~~R~~iL~~la~~l~~~~ 144 (493)
..++||||+|+.+.++++++++||+||+++++++.++.+|+++||++|++||+ .|++++..+|.++|++++++|+++.
T Consensus 32 ~~~~~I~G~~~~~~~~~~~~v~nP~tg~~i~~v~~~~~~dv~~Av~aA~~A~~--~w~~~~~~~R~~~L~~~a~~l~~~~ 109 (504)
T 3ek1_A 32 KSQCLVNGRWIDAADGTTIKVTNPADGSVIGTVPSLSVATIKEAIDASAKALS--GWAAKTAKERAGILRKWFDLIIANA 109 (504)
T ss_dssp CSSEEETTEEECCTTCCEEEEECTTTCCEEEEEECCCHHHHHHHHHHHHHHHH--HHHHSCHHHHHHHHHHHHHHHHHTH
T ss_pred ccCeEECCEEeeCCCCCEEEEECCCCCCEEEEEcCCCHHHHHHHHHHHHHHHH--hhccCCHHHHHHHHHHHHHHHHHHH
Confidence 34789999999877889999999999999999999999999999999999999 9999999999999999999999999
Q ss_pred HHHHHHHHHHcCCChhhhhhccHHHHHHHHHHHHHhhHHhcCccCCCC-CCceeEEEeeeeeeE----------------
Q 011130 145 DEIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADKIQGLTAPAD-GPYHVQTLHEPIGVA---------------- 207 (493)
Q Consensus 145 ~ela~~~~~e~Gk~~~~a~~~Ev~~~~~~l~~~a~~~~~~~~~~~~~~-~~~~~~~~~~PlGVv---------------- 207 (493)
++|++++++|+|||+.+++. |+..+++.++|++.+++++.+...+.. .+...++.++|+|||
T Consensus 110 ~ela~~~~~e~Gk~~~ea~~-ev~~~~~~~~~~a~~~~~~~g~~~~~~~~~~~~~~~~~P~GVV~~I~PwN~P~~~~~~~ 188 (504)
T 3ek1_A 110 DDIALIMTSEQGKPLAEARG-EVLYAASFIEWFAEEAKRVYGDTIPAPQNGQRLTVIRQPVGVTAAITPWNFPAAMITRK 188 (504)
T ss_dssp HHHHHHHHHHHCCCHHHHHH-HHHHHHHHHHHHHHHHTTCCEEEECCSSTTEEEEEEEEECCEEEEECCSSSTTHHHHHH
T ss_pred HHHHHHHHHHhCCCHHHHHH-HHHHHHHHHHHHHHHHHHhcCcccccccccccceeeccCceEEEEECCCcchHHHHHHH
Confidence 99999999999999999986 999999999999999988766654433 346788999999999
Q ss_pred -------------------------------------eEEEeeeCCccchhhhhhccccccEEEEecCcHHHHHHHHHHh
Q 011130 208 -------------------------------------GVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLAA 250 (493)
Q Consensus 208 -------------------------------------gvv~vv~~~~~~~~~~L~~~~~v~~v~fTGs~~~g~~v~~~a~ 250 (493)
|++|+|++.+.++++.|+.||+||+|+||||+.+|+.|++.++
T Consensus 189 ~a~ALaaGN~VVlKPs~~tp~t~~~l~~l~~eaGlP~gv~~vv~g~~~~~g~~L~~~p~v~~V~FTGS~~~G~~i~~~aa 268 (504)
T 3ek1_A 189 AAPALAAGCTMIVRPADLTPLTALALGVLAEKAGIPAGVLQIVTGKAREIGAELTSNDTVRKLSFTGSTEVGRLLMAQCA 268 (504)
T ss_dssp HHHHHHHTCEEEEECCTTSCHHHHHHHHHHHHTTCCTTTEEECCSCHHHHHHHHHHCTTCCEEEEESCHHHHHHHHHHHG
T ss_pred HHHHHHcCCEEEEECCCcChHHHHHHHHHHHHhCCCcccEEEEeCCCHHHHHHHHhCCCcCEEEEECCHHHHHHHHHhhh
Confidence 8999999888889999999999999999999999999999999
Q ss_pred hcCCCceeEecCCCCceEEccCCCHHHHHHHHHHHHHhhcCCcccCCCeeEecchhHHHHHHHHHHHHhhcccCCCCCCC
Q 011130 251 KSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMKRVVGDPFKGG 330 (493)
Q Consensus 251 ~~~~~pv~lelgG~~p~iV~~daDl~~aa~~i~~~~~~~~GQ~C~a~~~v~V~~~i~d~f~~~l~~~~~~~~vg~p~~~~ 330 (493)
+ ++||+++|||||||+||++|||+|.|++.+++++|.|+||.|++++|||||+++||+|+++|+++++++++|||.|++
T Consensus 269 ~-~lk~v~lELGGk~p~IV~~dADl~~Aa~~i~~~~f~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~~G~p~~~~ 347 (504)
T 3ek1_A 269 P-TIKRISLELGGNAPFIVFDDADLDAAVDGAMVSKYRNAGQTCVCANRIYVQRGVYDKFAEKLAAKVKELKVGNGTEPG 347 (504)
T ss_dssp G-GTCEEEEECCCCEEEEECTTSCHHHHHHHHHHHHHGGGGCSTTSEEEEEEEHHHHHHHHHHHHHHHHTCCBSCTTSTT
T ss_pred h-hcCCeEecCCCCCeeEEcCCCCHHHHHHHHHHHHHhcCCCCCCCCCEEEEehhHHHHHHHHHHHHHhhcccCCCcccc
Confidence 8 899999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CccccCCCHHHHHHHHHHHHHHHhCCCEEEeCCcccCCCCceeeceEEecCCCCccccccccccceEEEEEeCCHHHHHH
Q 011130 331 IQQGPQIDSEQFEKILKYIRSGVDGGAKLETGGERLGAKGYYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYKDLDEVIQ 410 (493)
Q Consensus 331 ~~~gpli~~~~~~~~~~~i~~a~~~ga~v~~gg~~~~~~g~~~~Ptvl~~~~~~~~i~~~E~fgPvl~v~~~~~~~eai~ 410 (493)
+++||++++.+++++.++|++++++|+++++||.. ..|+|++|||+.+++++|++++||+||||++|++|+|+||||+
T Consensus 348 ~~~Gpli~~~~~~~v~~~i~~a~~~Ga~v~~gG~~--~~g~~~~PTvl~~v~~~~~i~~eEiFGPVl~v~~~~~~deAi~ 425 (504)
T 3ek1_A 348 VVIGPMIEEKAITKVKAHIEDAVSKGAKLITGGKE--LGGLFFEPGILTGVTSDMLVAKEETFGPLAPLFAFDTEEEVIA 425 (504)
T ss_dssp CCBCCCSSHHHHHHHHHHHHHHHHTTCEEEECCCE--EETTEECCEEEEEECTTSGGGTSCCCSSEEEEEEECCHHHHHH
T ss_pred CccccccCHHHHHHHHHHHHHHHHCCCEEEeCCcc--CCCceECCeEEecCCCcChhhcccccCcEEEEEEeCCHHHHHH
Confidence 99999999999999999999999999999999975 3689999999999999999999999999999999999999999
Q ss_pred HHHcCCCCcEEEEecCCHHHHHHHHHhcceeEEEECCcCCCCCCCCccCCCCCCCCCcchHHHHHhhhhceEEEEeC
Q 011130 411 RSNASQYGLAAGVFTHNLDTANTLMRALRVGSVWINCFDVFDAAIPFGGYKQSGQGREKGSYSLSNYLQVKAVVTAL 487 (493)
Q Consensus 411 ~~n~~~~gl~a~v~t~d~~~~~~~~~~l~~g~V~VN~~~~~~~~~pfGG~~~SG~G~~~g~~~l~~~~~~k~v~~~~ 487 (493)
++|+++|||+++|||+|.++++++++++++|+||||++....+.+||||+|+||+|+++|.+++++|++.|+|++.+
T Consensus 426 ~aN~~~~GL~a~v~t~d~~~a~~~a~~l~aG~V~vN~~~~~~~~~PfGG~k~SG~Gr~~G~~gl~~~t~~K~v~~~~ 502 (504)
T 3ek1_A 426 QANDTIFGLAAYFYTENFSRAIRVSEALEYGMVGHNTGLISNEVAPFGGVKQSGLGREGSKYGIEEYLETKYICSAY 502 (504)
T ss_dssp HHHCSSCCSEEEEECCBHHHHHHHHHHSCCSEEEESCSCCCCSSSCBCCSGGGEESCBSTTTSGGGGEEEEEEEEEC
T ss_pred HHhCCCCCeEEEEEcCCHHHHHHHHHhCCcCeEEECCCCCCCCCCCcCCcCcCcCCCCCcHHHHHHhhceEEEEEec
Confidence 99999999999999999999999999999999999998777889999999999999999999999999999998875
No 11
>3k2w_A Betaine-aldehyde dehydrogenase; structural genomics, PSI-2, protein initiative; 1.90A {Pseudoalteromonas atlantica T6C}
Probab=100.00 E-value=1.1e-89 Score=724.98 Aligned_cols=423 Identities=33% Similarity=0.535 Sum_probs=399.6
Q ss_pred CccccceeCCEeeeCCCCCeeeeecCCCCCeEEEEecCCHHHHHHHHHHHHHHccCCCCCCCCHHHHHHHHHHHHHHHHH
Q 011130 63 VDYTQLLINGQFVDSASGKTFPTLDPRTGDVITHVAEGEAEDVNRAVSAARKAFDEGPWPRMTAYERSKIILRFADLLER 142 (493)
Q Consensus 63 ~~~~~~~I~G~~~~~~~~~~~~v~~P~tg~~i~~v~~~~~~~v~~av~~A~~A~~~~~w~~~~~~~R~~iL~~la~~l~~ 142 (493)
.+..++||||+|+.+.++++++++||+||+++++++.++.+|+++++++|++||+ .|+.++..+|.++|++++++|++
T Consensus 10 ~~~~~~~I~G~~~~~~~~~~~~~~nP~tg~~i~~~~~~~~~dv~~av~aA~~A~~--~w~~~~~~~R~~~L~~~a~~l~~ 87 (497)
T 3k2w_A 10 FKNKVNFIGGQYVPSNESDTIDILSPSTGKVIGEIPAGCKADAENALEVAQAAQK--AWAKLTARTRQNMLRTFANKIRE 87 (497)
T ss_dssp CCTTCEEETTEEECCSSCCEEEEECSSSCSEEEEEECCCHHHHHHHHHHHHHHHH--HHHTSCHHHHHHHHHHHHHHHHT
T ss_pred ccccceeECCEEecCCCCCEEEEECCCCCCEEEEEcCCCHHHHHHHHHHHHHHHH--HhccCCHHHHHHHHHHHHHHHHH
Confidence 3456899999999887789999999999999999999999999999999999999 99999999999999999999999
Q ss_pred hHHHHHHHHHHHcCCChhhhhhccHHHHHHHHHHHHHhhHHhcCccCCC-CCCceeEEEeeeeeeE--------------
Q 011130 143 HNDEIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADKIQGLTAPA-DGPYHVQTLHEPIGVA-------------- 207 (493)
Q Consensus 143 ~~~ela~~~~~e~Gk~~~~a~~~Ev~~~~~~l~~~a~~~~~~~~~~~~~-~~~~~~~~~~~PlGVv-------------- 207 (493)
+.++|++++++|+|||..+++. |+..+++.++|++.+++++.+...+. ..+...++.++|+|||
T Consensus 88 ~~~~la~~~~~e~Gk~~~~a~~-ev~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~P~GVV~~I~PwN~P~~~~~ 166 (497)
T 3k2w_A 88 NKHILAPMLVAEQGKLLSVAEM-EVDVTATFIDYGCDNALTIEGDILPSDNQDEKIYIHKVPRGVVVGITAWNFPLALAG 166 (497)
T ss_dssp THHHHHHHHHHHHCCCHHHHHH-HHHHHHHHHHHHHHTTTTCCEEEEECSSTTEEEEEEEEECSEEEEECCSSSHHHHHH
T ss_pred HHHHHHHHHHHHhCCCHHHHHH-HHHHHHHHHHHHHHHHHHhcCcccccCCCCcceeEEEcCCceEEEECCCccHHHHHH
Confidence 9999999999999999999984 99999999999999988877665443 2456788999999998
Q ss_pred ---------------------------------------eEEEeeeCCccchhhhhhccccccEEEEecCcHHHHHHHHH
Q 011130 208 ---------------------------------------GVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQL 248 (493)
Q Consensus 208 ---------------------------------------gvv~vv~~~~~~~~~~L~~~~~v~~v~fTGs~~~g~~v~~~ 248 (493)
|++|+|++.+.++++.|+.||+||+|+||||+.+|+.|++.
T Consensus 167 ~~~~~ALaaGN~VVlKps~~tp~t~~~l~~ll~~aGlP~gvv~vv~g~~~~~g~~L~~~p~vd~I~fTGS~~~G~~i~~~ 246 (497)
T 3k2w_A 167 RKIGPALITGNTMVLKPTQETPLATTELGRIAKEAGLPDGVLNVINGTGSVVGQTLCESPITKMITMTGSTVAGKQIYKT 246 (497)
T ss_dssp HHHHHHHHTTCEEEEECCSSSCHHHHHHHHHHHHTTCCTTSEEECCSCTTTHHHHHHHCSSEEEEEEESCHHHHHHHHHH
T ss_pred HHHHHHHHcCCEEEEECCCCChHHHHHHHHHHHHhCcCcCeEEEEeCCchHHHHHHHhCCCcCEEEEECcHHHHHHHHHH
Confidence 89999999888899999999999999999999999999999
Q ss_pred HhhcCCCceeEecCCCCceEEccCCCHHHHHHHHHHHHHhhcCCcccCCCeeEecchhHHHHHHHHHHHHhhcccCCCCC
Q 011130 249 AAKSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMKRVVGDPFK 328 (493)
Q Consensus 249 a~~~~~~pv~lelgG~~p~iV~~daDl~~aa~~i~~~~~~~~GQ~C~a~~~v~V~~~i~d~f~~~l~~~~~~~~vg~p~~ 328 (493)
+++ ++||+++|||||||+||++|||++.|++.+++++|.|+||.|++++|||||++++|+|+++|+++++++++|||.+
T Consensus 247 aa~-~l~pv~lElGGk~p~iV~~dADl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~vg~p~~ 325 (497)
T 3k2w_A 247 SAE-YMTPVMLELGGKAPMVVMDDADLDKAAEDALWGRFANCGQVCTCVERLYVHASVYDEFMAKFLPLVKGLKVGDPMD 325 (497)
T ss_dssp HTT-TTCCEEEECCCCEEEEECTTCCHHHHHHHHHHHHHGGGGCSTTSEEEEEEETTTHHHHHHHHHHHHHTCCBSCTTS
T ss_pred hhh-cCCCeEEEcCCCCceEEcCCCCHHHHHHHHHHHHHhCCCCCCcCCcEEEEeHHHHHHHHHHHHHHHHhccCCCCCC
Confidence 998 8999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCccccCCCHHHHHHHHHHHHHHHhCCCEEEeCCcc--cCC--CCceeeceEEecCCCCccccccccccceEEEEEeCC
Q 011130 329 GGIQQGPQIDSEQFEKILKYIRSGVDGGAKLETGGER--LGA--KGYYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYKD 404 (493)
Q Consensus 329 ~~~~~gpli~~~~~~~~~~~i~~a~~~ga~v~~gg~~--~~~--~g~~~~Ptvl~~~~~~~~i~~~E~fgPvl~v~~~~~ 404 (493)
+++++||+++..+++++.++|++++++|+++++||.. .+. .|+|++|||+.+++++|++++||+||||++|++|+|
T Consensus 326 ~~~~~gpli~~~~~~~v~~~i~~a~~~Ga~v~~gG~~~~~~~~~~g~~~~Ptvl~~v~~~~~i~~eEiFGPVl~v~~~~~ 405 (497)
T 3k2w_A 326 ADSQMGPKCNQREIDNIDHIVHEAIKQGATVATGGKTATVEGFEGGCWYEPTVLVDVKQDNIVVHEETFGPILPIVKVSS 405 (497)
T ss_dssp TTCSBCCCSCHHHHHHHHHHHHHHHHHHCEEEECCC---------CCCCCCEEEESCCTTSHHHHSCCCSSEEEEEEESC
T ss_pred CCCccccCcCHHHHHHHHHHHHHHHHCCCEEEecCccCCccccCCCceeCCEEEecCCCCcHhhcCCccCcEEEEEEeCC
Confidence 9999999999999999999999999999999999973 332 689999999999999999999999999999999999
Q ss_pred HHHHHHHHHcCCCCcEEEEecCCHHHHHHHHHhcceeEEEECCcCCCCCCCCccCCCCCCCCCcchHHHHHhhhhceEEE
Q 011130 405 LDEVIQRSNASQYGLAAGVFTHNLDTANTLMRALRVGSVWINCFDVFDAAIPFGGYKQSGQGREKGSYSLSNYLQVKAVV 484 (493)
Q Consensus 405 ~~eai~~~n~~~~gl~a~v~t~d~~~~~~~~~~l~~g~V~VN~~~~~~~~~pfGG~~~SG~G~~~g~~~l~~~~~~k~v~ 484 (493)
+||||+++|+++|||+++|||+|.+.++++++++++|+||||+++...+.+||||+|+||+|+++|.+++++|++.|+|+
T Consensus 406 ~deAi~~aN~~~~gL~a~v~t~d~~~a~~~~~~l~aG~v~vN~~~~~~~~~PfGG~k~SG~G~~~G~~gl~~ft~~k~v~ 485 (497)
T 3k2w_A 406 MEQAIEFCNDSIYGLSAYVHTQSFANINQAISDLEVGEVYINRGMGEQHQGFHNGWKQSGFGGEDGKFGLEQYLEKKTVY 485 (497)
T ss_dssp HHHHHHHHTCSSEESEEEEECSBHHHHHHHHHHCCSSEEEESCCSCCCTTSCBCCEETSEESCBSHHHHHHTTEEEEEEE
T ss_pred HHHHHHHHhcCCCCcEEEEEcCCHHHHHHHHHhCCeeEEEEcCCCCCCCCCCcCCcCCCcCCccchHHHHHHhcceEEEE
Confidence 99999999999999999999999999999999999999999998888899999999999999999999999999999999
Q ss_pred EeCCC
Q 011130 485 TALKN 489 (493)
Q Consensus 485 ~~~~~ 489 (493)
+++..
T Consensus 486 ~~~~~ 490 (497)
T 3k2w_A 486 INEAE 490 (497)
T ss_dssp EECCC
T ss_pred EEccc
Confidence 88643
No 12
>3b4w_A Aldehyde dehydrogenase; RV0223C-NAD complex, structural genomics, PSI-2, protein STR initiative; HET: NAD GOL; 1.80A {Mycobacterium tuberculosis}
Probab=100.00 E-value=2.8e-89 Score=720.83 Aligned_cols=420 Identities=36% Similarity=0.600 Sum_probs=397.3
Q ss_pred cccceeCCEeeeCCCCCeeeeecCCCCCeEEEEecCCHHHHHHHHHHHHHHccCCCCCCCCHHHHHHHHHHHHHHHHHhH
Q 011130 65 YTQLLINGQFVDSASGKTFPTLDPRTGDVITHVAEGEAEDVNRAVSAARKAFDEGPWPRMTAYERSKIILRFADLLERHN 144 (493)
Q Consensus 65 ~~~~~I~G~~~~~~~~~~~~v~~P~tg~~i~~v~~~~~~~v~~av~~A~~A~~~~~w~~~~~~~R~~iL~~la~~l~~~~ 144 (493)
+.++||||+|+.+.++++++++||+||+++++++.++.+|+++|+++|++||+.|.|+++|..+|.++|++++++|+++.
T Consensus 8 ~~~~~i~G~~~~~~~~~~~~~~nP~tg~~i~~~~~~~~~~v~~av~~A~~A~~~g~w~~~~~~~R~~~L~~~a~~l~~~~ 87 (495)
T 3b4w_A 8 YDKLFIGGKWTKPSTSDVIEVRCPATGEYVGKVPMAAAADVDAAVAAARAAFDNGPWPSTPPHERAAVIAAAVKMLAERK 87 (495)
T ss_dssp CSSEEETTEEECCSSCCEEEEECTTTCCEEEEEECCCHHHHHHHHHHHHHHHHHSSTTTSCHHHHHHHHHHHHHHHHHTH
T ss_pred ccceeECCEEecCCCCCeEEEECCCCCCEEEEEeCCCHHHHHHHHHHHHHhcccCccccCCHHHHHHHHHHHHHHHHHHH
Confidence 44789999999876778999999999999999999999999999999999997556999999999999999999999999
Q ss_pred HHHHHHHHHHcCCChhhhhhccHHHHHHHHHHHHHhhHHhcCccCCCCCCceeEEEeeeeeeE-----------------
Q 011130 145 DEIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADKIQGLTAPADGPYHVQTLHEPIGVA----------------- 207 (493)
Q Consensus 145 ~ela~~~~~e~Gk~~~~a~~~Ev~~~~~~l~~~a~~~~~~~~~~~~~~~~~~~~~~~~PlGVv----------------- 207 (493)
++|++++++|+|||+.+++..|+..+++.++|++++++++.+...+...+...++.++|+|||
T Consensus 88 ~ela~~~~~e~Gk~~~ea~~~Ev~~~~~~~~~~a~~~~~~~g~~~~~~~~~~~~~~~~P~GVv~~I~PwN~P~~~~~~~~ 167 (495)
T 3b4w_A 88 DLFTKLLAAETGQPPTIIETMHWMGSMGAMNYFAGAADKVTWTETRTGSYGQSIVSREPVGVVGAIVAWNVPLFLAVNKI 167 (495)
T ss_dssp HHHHHHHHHHHCCCHHHHHHTTTHHHHHHHHHHHTCGGGSCSEEEEEETTEEEEEEEEECCEEEEECCSSSHHHHHHHHH
T ss_pred HHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcccCCCCceEEEEEccCceEEEECCCcchHHHHHHHH
Confidence 999999999999999998745999999999999999988777654433344678999999999
Q ss_pred ------------------------------------eEEEeeeCCccchhhhhhccccccEEEEecCcHHHHHHHHHHhh
Q 011130 208 ------------------------------------GVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLAAK 251 (493)
Q Consensus 208 ------------------------------------gvv~vv~~~~~~~~~~L~~~~~v~~v~fTGs~~~g~~v~~~a~~ 251 (493)
|++|+|++ +.++++.|+.||+||+|+||||+.+|+.|++.+++
T Consensus 168 ~~ALaaGN~VVlKps~~tp~t~~~l~~l~~eaGlP~gvv~vv~g-~~~~g~~L~~~~~v~~I~FTGS~~~G~~i~~~aa~ 246 (495)
T 3b4w_A 168 APALLAGCTIVLKPAAETPLTANALAEVFAEVGLPEGVLSVVPG-GIETGQALTSNPDIDMFTFTGSSAVGREVGRRAAE 246 (495)
T ss_dssp HHHHHTTCEEEEECBTTSCHHHHHHHHHHHHTTCCTTSEEECCB-SHHHHHHHTTCTTCCEEEEESCHHHHHHHHHHHHH
T ss_pred HHHHHcCCEEEEecCCccHHHHHHHHHHHHHhCCCcCeEEEEeC-CHHHHHHHHhCCCcCEEEEeCCHHHHHHHHHHhhh
Confidence 89999999 88899999999999999999999999999999998
Q ss_pred cCCCceeEecCCCCceEEccCCCHHHHHHHHHHHHHhhcCCcccCCCeeEecchhHHHHHHHHHHHHhhcccCCCCCCCC
Q 011130 252 SNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMKRVVGDPFKGGI 331 (493)
Q Consensus 252 ~~~~pv~lelgG~~p~iV~~daDl~~aa~~i~~~~~~~~GQ~C~a~~~v~V~~~i~d~f~~~l~~~~~~~~vg~p~~~~~ 331 (493)
++||+++|||||||+||++|||++.|++.+++++|.|+||.|++++|||||++++|+|+++|+++++++++|||.++++
T Consensus 247 -~l~pv~lELGGk~p~iV~~dADl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~~g~p~~~~~ 325 (495)
T 3b4w_A 247 -MLKPCTLELGGKSAAIILEDVDLAAAIPMMVFSGVMNAGQGCVNQTRILAPRSRYDEIVAAVTNFVTALPVGPPSDPAA 325 (495)
T ss_dssp -TTCCEEEECCCCEEEEECTTCCHHHHHHHHHHHHHGGGGCCTTCEEEEEEEGGGHHHHHHHHHHHHHHSCBCCTTCTTC
T ss_pred -cCCceeecCCCcceEEECCCCCHHHHHHHHHHHHhhcCCCCCCCCeEEEEcccHHHHHHHHHHHHHHhcCCCCCccCCC
Confidence 8999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ccccCCCHHHHHHHHHHHHHHHhCCCEEEeCCcccC--CCCceeeceEEecCCCCccccccccccceEEEEEeCCHHHHH
Q 011130 332 QQGPQIDSEQFEKILKYIRSGVDGGAKLETGGERLG--AKGYYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYKDLDEVI 409 (493)
Q Consensus 332 ~~gpli~~~~~~~~~~~i~~a~~~ga~v~~gg~~~~--~~g~~~~Ptvl~~~~~~~~i~~~E~fgPvl~v~~~~~~~eai 409 (493)
++||+++..+++++.++|++++++|+++++||.... ..|+|++|||+.+++++|++++||+||||++|++|+|+||||
T Consensus 326 ~~gpli~~~~~~rv~~~i~~a~~~Ga~~~~gG~~~~~~~~g~~~~PTvl~~v~~~~~i~~eEiFGPVl~v~~~~~~deAi 405 (495)
T 3b4w_A 326 QIGPLISEKQRTRVEGYIAKGIEEGARLVCGGGRPEGLDNGFFIQPTVFADVDNKMTIAQEEIFGPVLAIIPYDTEEDAI 405 (495)
T ss_dssp CBCCCSCHHHHHHHHHHHHHHHHTTCEEEECCSCCTTCTTSCCCCCEEEESCCTTSHHHHSCCCSSEEEEEEESSHHHHH
T ss_pred ccCCCcCHHHHHHHHHHHHHHHhCCCEEEecCcccccccCCceeCCEEecCCCCCChhhhcccccceEEEEecCCHHHHH
Confidence 999999999999999999999999999999997643 369999999999999999999999999999999999999999
Q ss_pred HHHHcCCCCcEEEEecCCHHHHHHHHHhcceeEEEECCcCCCCCCCCccCCCCCCCCCcchHHHHHhhhhceEEEEeC
Q 011130 410 QRSNASQYGLAAGVFTHNLDTANTLMRALRVGSVWINCFDVFDAAIPFGGYKQSGQGREKGSYSLSNYLQVKAVVTAL 487 (493)
Q Consensus 410 ~~~n~~~~gl~a~v~t~d~~~~~~~~~~l~~g~V~VN~~~~~~~~~pfGG~~~SG~G~~~g~~~l~~~~~~k~v~~~~ 487 (493)
+++|+++|||+++|||+|.++++++++++++|+||||+++ ..+.+||||+|+||+|+++|.+++++|++.|+|++.+
T Consensus 406 ~~aN~~~~gL~a~v~t~d~~~a~~~~~~l~aG~V~iN~~~-~~~~~PfGG~k~SG~Gr~~G~~gl~~~~~~k~v~~~~ 482 (495)
T 3b4w_A 406 AIANDSVYGLAGSVWTTDVPKGIKISQQIRTGTYGINWYA-FDPGSPFGGYKNSGIGRENGPEGVEHFTQQKSVLLPM 482 (495)
T ss_dssp HHHHCSSCCSCCEEECSCHHHHHHHHHHSCCSCCEESSCC-CCTTSCBCCSGGGEESCBSHHHHHHTTEEEEEEECCT
T ss_pred HHHhcCCCCeEEEEECCCHHHHHHHHHhCCEeEEEECCCC-CCCCCCCCCCCCCCcCccchHHHHHHhcceeEEEEcc
Confidence 9999999999999999999999999999999999999987 7789999999999999999999999999999998864
No 13
>1o04_A Aldehyde dehydrogenase, mitochondrial precursor; ALDH, NAD, NADH, isomerization, oxidoreductase; HET: NAD; 1.42A {Homo sapiens} SCOP: c.82.1.1 PDB: 1nzw_A* 3inl_A* 3n80_A* 1nzz_A* 1o00_A* 1nzx_A* 1o01_A* 1o05_A 1of7_A* 1o02_A* 3inj_A* 3sz9_A* 1zum_A 2onm_A* 2onp_A* 2onn_A 2ono_A* 3n81_A 3n82_A* 3n83_A* ...
Probab=100.00 E-value=3e-89 Score=720.82 Aligned_cols=421 Identities=58% Similarity=0.969 Sum_probs=397.9
Q ss_pred cceeCCEeeeCCCCCeeeeecCCCCCeEEEEecCCHHHHHHHHHHHHHHccCC-CCCCCCHHHHHHHHHHHHHHHHHhHH
Q 011130 67 QLLINGQFVDSASGKTFPTLDPRTGDVITHVAEGEAEDVNRAVSAARKAFDEG-PWPRMTAYERSKIILRFADLLERHND 145 (493)
Q Consensus 67 ~~~I~G~~~~~~~~~~~~v~~P~tg~~i~~v~~~~~~~v~~av~~A~~A~~~~-~w~~~~~~~R~~iL~~la~~l~~~~~ 145 (493)
++||||+|+.+.++++++++||+||+++++++.++.+|+++++++|++||++| .|++++..+|.++|++++++|++|.+
T Consensus 21 ~~~i~G~~~~~~~~~~~~v~nP~tg~~i~~~~~~~~~~v~~av~~A~~A~~~~~~w~~~~~~~R~~~L~~~a~~l~~~~~ 100 (500)
T 1o04_A 21 QIFINNEWHDAVSRKTFPTVNPSTGEVICQVAEGDKEDVDKAVKAARAAFQLGSPWRRMDASHRGRLLNRLADLIERDRT 100 (500)
T ss_dssp SEEETTEEECCTTCCEEEEEETTTTEEEEEEECBCHHHHHHHHHHHHHHTSTTSHHHHSCHHHHHHHHHHHHHHHHHTHH
T ss_pred CeeECCEEecCCCCCeEEEECCCCCCEEEEEeCCCHHHHHHHHHHHHHHhhcccccccCCHHHHHHHHHHHHHHHHHHHH
Confidence 58999999987678899999999999999999999999999999999999732 59999999999999999999999999
Q ss_pred HHHHHHHHHcCCChhhhhhccHHHHHHHHHHHHHhhHHhcCccCCCCCCceeEEEeeeeeeE------------------
Q 011130 146 EIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADKIQGLTAPADGPYHVQTLHEPIGVA------------------ 207 (493)
Q Consensus 146 ela~~~~~e~Gk~~~~a~~~Ev~~~~~~l~~~a~~~~~~~~~~~~~~~~~~~~~~~~PlGVv------------------ 207 (493)
+|++++++|+|||+.++...|+..+++.++|++++++++.+...+...+...++.++|+|||
T Consensus 101 ela~~~~~e~Gk~~~ea~~~ev~~~~~~~~~~a~~~~~~~g~~~~~~~~~~~~~~~~P~GVv~~I~PwN~P~~~~~~~~a 180 (500)
T 1o04_A 101 YLAALETLDNGKPYVISYLVDLDMVLKCLRYYAGWADKYHGKTIPIDGDFFSYTRHEPVGVCGQIIPWNFPLLMQAWKLG 180 (500)
T ss_dssp HHHHHHHHHHCCCHHHHHHTHHHHHHHHHHHHHHHTTTCCEEEECCSSSEEEEEEEEECCEEEEECCSSSHHHHHHHHHH
T ss_pred HHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHhhCcceecCCCceEEEEEecCCcEEEECCCCchHHHHHHHHH
Confidence 99999999999999987656999999999999999888766544444445678999999999
Q ss_pred -----------------------------------eEEEeeeCCccchhhhhhccccccEEEEecCcHHHHHHHHHHh-h
Q 011130 208 -----------------------------------GVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLAA-K 251 (493)
Q Consensus 208 -----------------------------------gvv~vv~~~~~~~~~~L~~~~~v~~v~fTGs~~~g~~v~~~a~-~ 251 (493)
|++|+|++.+.++++.|+.||+||+|+||||+.+|+.|++.++ +
T Consensus 181 ~ALaaGN~VVlKps~~tp~t~~~l~~l~~~aGlP~gvv~vv~g~~~~~g~~L~~~p~v~~I~FTGS~~~G~~i~~~aa~~ 260 (500)
T 1o04_A 181 PALATGNVVVMKVAEQTPLTALYVANLIKEAGFPPGVVNIVPGFGPTAGAAIASHEDVDKVAFTGSTEIGRVIQVAAGSS 260 (500)
T ss_dssp HHHHTTCEEEEECCTTSCHHHHHHHHHHHHHTCCTTSEEECCBCTTTHHHHHHTCTTCCEEEEESCHHHHHHHHHHHHHT
T ss_pred HHHHcCCEEEEECCccChHHHHHHHHHHHHhCCCcCeEEEEecCcHHHHHHHHhCCCcCEEEEECCHHHHHHHHHhhhhh
Confidence 8999999988889999999999999999999999999999999 6
Q ss_pred cCCCceeEecCCCCceEEccCCCHHHHHHHHHHHHHhhcCCcccCCCeeEecchhHHHHHHHHHHHHhhcccCCCCCCCC
Q 011130 252 SNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMKRVVGDPFKGGI 331 (493)
Q Consensus 252 ~~~~pv~lelgG~~p~iV~~daDl~~aa~~i~~~~~~~~GQ~C~a~~~v~V~~~i~d~f~~~l~~~~~~~~vg~p~~~~~ 331 (493)
++||+++|||||||+||++|||++.|++.+++++|.|+||.|++++|||||++++|+|+++|+++++++++|||.|+++
T Consensus 261 -~l~pv~lELGGk~p~iV~~dADl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~~G~p~~~~~ 339 (500)
T 1o04_A 261 -NLKRVTLELGGKSPNIIMSDADMDWAVEQAHFALFFNQGQCSCAGSRTFVQEDIYDEFVERSVARAKSRVVGNPFDSKT 339 (500)
T ss_dssp -TCCEEEEECCCCEEEEECTTSCHHHHHHHHHHHHHGGGGCCTTCEEEEEEEHHHHHHHHHHHHHHHHHCCBCCTTSTTC
T ss_pred -cCceEEEEcCCcCeEEECCCCCHHHHHHHHHHHHhccCCCCCCCCCEEEEehhHHHHHHHHHHHHHHhCcCCCcccccC
Confidence 8999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ccccCCCHHHHHHHHHHHHHHHhCCCEEEeCCcccCCCCceeeceEEecCCCCccccccccccceEEEEEeCCHHHHHHH
Q 011130 332 QQGPQIDSEQFEKILKYIRSGVDGGAKLETGGERLGAKGYYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYKDLDEVIQR 411 (493)
Q Consensus 332 ~~gpli~~~~~~~~~~~i~~a~~~ga~v~~gg~~~~~~g~~~~Ptvl~~~~~~~~i~~~E~fgPvl~v~~~~~~~eai~~ 411 (493)
++||+++..+++++.++|++++++|+++++||...+..|+|++||||.+++++|++++||+||||++|++|+|+||||++
T Consensus 340 ~~Gpli~~~~~~rv~~~i~~a~~~Ga~~~~gG~~~~~~g~~~~PTvl~~v~~~~~i~~eEiFGPVl~v~~~~~~deAi~~ 419 (500)
T 1o04_A 340 EQGPQVDETQFKKILGYINTGKQEGAKLLCGGGIAADRGYFIQPTVFGDVQDGMTIAKEEIFGPVMQILKFKTIEEVVGR 419 (500)
T ss_dssp SBCCCSSHHHHHHHHHHHHHHHHTTCEEEECCSBCCSSSSCBCCEEEESCCTTSHHHHSCCCSSEEEEEEECCHHHHHHH
T ss_pred ccCcccCHHHHHHHHHHHHHHHhCCCEEEeCCccCCCCCCeeCCEEEeCCCCCChhhhCcccceEEEEEeeCCHHHHHHH
Confidence 99999999999999999999999999999999764446999999999999999999999999999999999999999999
Q ss_pred HHcCCCCcEEEEecCCHHHHHHHHHhcceeEEEECCcCCCCCCCCccCCCCCCCCCcchHHHHHhhhhceEEEEeCC
Q 011130 412 SNASQYGLAAGVFTHNLDTANTLMRALRVGSVWINCFDVFDAAIPFGGYKQSGQGREKGSYSLSNYLQVKAVVTALK 488 (493)
Q Consensus 412 ~n~~~~gl~a~v~t~d~~~~~~~~~~l~~g~V~VN~~~~~~~~~pfGG~~~SG~G~~~g~~~l~~~~~~k~v~~~~~ 488 (493)
+|+++|||+++|||+|.++++++++++++|+||||+++...+.+||||+|.||+|+++|.+++++|++.|+|++++.
T Consensus 420 aN~~~~gL~a~v~t~d~~~a~~~~~~l~aG~V~iN~~~~~~~~~PfGG~k~SG~G~~~G~~gl~~f~~~K~v~~~~~ 496 (500)
T 1o04_A 420 ANNSTYGLAAAVFTKDLDKANYLSQALQAGTVWVNCYDVFGAQSPFGGYKMSGSGRELGEYGLQAYTEVKTVTVKVP 496 (500)
T ss_dssp HHCSSCCSEEEEECSBHHHHHHHHHHCCSSEEEESCSSCCCTTSCBCCSGGGEESCBSTGGGGGGGEEEEEEEEECS
T ss_pred HhcCCCCceEEEECCCHHHHHHHHHhCCeeEEEECCCCCCCCCCCCCCcCCCCCCccchHHHHHHhcceEEEEEecC
Confidence 99999999999999999999999999999999999987777899999999999999999999999999999988753
No 14
>3r31_A BADH, betaine aldehyde dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.15A {Agrobacterium tumefaciens}
Probab=100.00 E-value=1.3e-89 Score=725.74 Aligned_cols=416 Identities=38% Similarity=0.676 Sum_probs=397.1
Q ss_pred CccccceeCCEeeeCCCCCeeeeecCCCCCeEEEEecCCHHHHHHHHHHHHHHccCCCCCCCCHHHHHHHHHHHHHHHHH
Q 011130 63 VDYTQLLINGQFVDSASGKTFPTLDPRTGDVITHVAEGEAEDVNRAVSAARKAFDEGPWPRMTAYERSKIILRFADLLER 142 (493)
Q Consensus 63 ~~~~~~~I~G~~~~~~~~~~~~v~~P~tg~~i~~v~~~~~~~v~~av~~A~~A~~~~~w~~~~~~~R~~iL~~la~~l~~ 142 (493)
....++||||+|+.+.++++++++||+||+++++++.++.+|+++|+++|++||+ .|++++..+|.++|++++++|++
T Consensus 12 ~~~~~~~I~G~~~~~~~~~~~~v~nP~tg~~i~~~~~~~~~dv~~av~aA~~A~~--~w~~~~~~~R~~~L~~~a~~l~~ 89 (517)
T 3r31_A 12 QPKASHFIDGDYVEDNTGTPFESIFPATGEMIAKLHAATPAIVERAIASAKRAQK--EWAAMSPMARGRILKRAADIMRE 89 (517)
T ss_dssp CCSSSEEETTEEECCTTSCEEEEECTTTCCEEEEEECCCHHHHHHHHHHHHHHHH--HHHHSCHHHHHHHHHHHHHHHHH
T ss_pred ccccCeeECCEEecCCCCCEEEEECCCCCCEEEEECCCCHHHHHHHHHHHHHHHH--HhhhCCHHHHHHHHHHHHHHHHH
Confidence 4456899999999887889999999999999999999999999999999999999 99999999999999999999999
Q ss_pred hHHHHHHHHHHHcCCChhhhhhccHHHHHHHHHHHHHhhHH----hcCccCCCCCCceeEEEeeeeeeE-----------
Q 011130 143 HNDEIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADK----IQGLTAPADGPYHVQTLHEPIGVA----------- 207 (493)
Q Consensus 143 ~~~ela~~~~~e~Gk~~~~a~~~Ev~~~~~~l~~~a~~~~~----~~~~~~~~~~~~~~~~~~~PlGVv----------- 207 (493)
+.++|++++++|+|||..++ |+..+++.++|+++++++ +.+...+...+. .++.++|+|||
T Consensus 90 ~~~ela~~~~~e~Gk~~~ea---ev~~~~~~~~~~a~~~~~~~~~~~g~~~~~~~~~-~~~~~~P~GVV~~I~PwN~P~~ 165 (517)
T 3r31_A 90 RNDALSTLETLDTGKPIQET---IVADPTSGADAFEFFGGIAPSALNGDYIPLGGDF-AYTKRVPLGVCVGIGAWNYPQQ 165 (517)
T ss_dssp THHHHHHHHHHHHCCCHHHH---HHHSHHHHHHHHHHHHHHHHHHTCCCEEECSSSE-EEEEEEECSEEEEECCSSSHHH
T ss_pred HHHHHHHHHHHHhCCCHHHH---HHHHHHHHHHHHHHHhhhccccccCcccccCCCc-ceEEEcCccEEEEECCCcchHH
Confidence 99999999999999999887 899999999999999988 777655544445 89999999998
Q ss_pred ------------------------------------------eEEEeeeCCccchhhhhhccccccEEEEecCcHHHHHH
Q 011130 208 ------------------------------------------GVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIV 245 (493)
Q Consensus 208 ------------------------------------------gvv~vv~~~~~~~~~~L~~~~~v~~v~fTGs~~~g~~v 245 (493)
|++|+|++ +.++++.|+.||+||+|+||||+.+|+.|
T Consensus 166 ~~~~~~a~ALaaGN~VVlKps~~tp~t~~~l~~ll~eaGlP~gvv~vv~g-~~~~g~~L~~~p~vd~I~FTGS~~~G~~i 244 (517)
T 3r31_A 166 IACWKAAPALVAGNAMVFKPSENTPLGALKIAEILIEAGLPKGLFNVIQG-DRDTGPLLVNHPDVAKVSLTGSVPTGRKV 244 (517)
T ss_dssp HHHHHHHHHHHTTCEEEEECCTTSCSHHHHHHHHHHHTTCCTTSEEECCC-CTTHHHHHHTCTTEEEEEEESCHHHHHHH
T ss_pred HHHHHHHHHHHcCCEEEEEcCcccHHHHHHHHHHHHHhCcCcccEEEEEC-CHHHHHHHHhCCCcCEEeccCCHHHHHHH
Confidence 89999999 88899999999999999999999999999
Q ss_pred HHHHhhcCCCceeEecCCCCceEEccCCCHHHHHHHHHHHHHhhcCCcccCCCeeEecchhHHHHHHHHHHHHhhcccCC
Q 011130 246 LQLAAKSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMKRVVGD 325 (493)
Q Consensus 246 ~~~a~~~~~~pv~lelgG~~p~iV~~daDl~~aa~~i~~~~~~~~GQ~C~a~~~v~V~~~i~d~f~~~l~~~~~~~~vg~ 325 (493)
++.+++ ++||+++|||||||+||++|||++.|++.+++++|.|+||.|++++|||||++++|+|+++|+++++++++||
T Consensus 245 ~~~aa~-~lk~v~lElGGk~p~IV~~dADl~~Aa~~i~~~~f~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~~G~ 323 (517)
T 3r31_A 245 AAAAAG-HLKHVTMELGGKSPMIVFDDADIESAVGGAMLGNFYSSGQVCSNGTRVFVQKKAKARFLENLKRRTEAMILGD 323 (517)
T ss_dssp HHHHHH-TTCEEEEECCCCEEEEECTTSCHHHHHHHHHHHHTSCCHHHHTTCEEEEEEGGGHHHHHHHHHHHHHHCCBCC
T ss_pred HHHhhc-CCCcEEEEcCCcCeEEEecCCCHHHHHHHHHHHHhcCCCceeccCceEEEeHHHHHHHHHHHHHHHHhccCCC
Confidence 999998 8999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCCccccCCCHHHHHHHHHHHHHHHhCCCEEEeCCcc-cC---CCCceeeceEEecCCCCccccccccccceEEEEE
Q 011130 326 PFKGGIQQGPQIDSEQFEKILKYIRSGVDGGAKLETGGER-LG---AKGYYIKPTVFTGVKDDMLIAKDEIFGPVQSILK 401 (493)
Q Consensus 326 p~~~~~~~gpli~~~~~~~~~~~i~~a~~~ga~v~~gg~~-~~---~~g~~~~Ptvl~~~~~~~~i~~~E~fgPvl~v~~ 401 (493)
|.|+++++||++++.+++++.++|++++++|+++++|| . .+ ..|+|++|||+.+++++|++++||+||||++|++
T Consensus 324 p~~~~~~~Gpli~~~~~~rv~~~i~~a~~~Ga~v~~gG-~~~~~~~~~g~~~~PTvl~~v~~~~~i~~eEiFGPVl~v~~ 402 (517)
T 3r31_A 324 PLDYATHLGPLVSKAQQEKVLSYIEKGKAEGATLITGG-GIPNNVAGEGAYVQPTVFADVTDDMTIAREEIFGPVMCVLD 402 (517)
T ss_dssp TTSTTCSBCCBSCHHHHHHHHHHHHHHHHHTCEEEECC-SCCSSCCSSSBCCCCEEEEEECTTSHHHHSCCSSSEEEEEE
T ss_pred CCCcCCcccCCcCHHHHHHHHHHHHHHHhCCCEEEECC-ccCcccCCCCceECCEEEecCCCCCccccceeeccEEEEEE
Confidence 99999999999999999999999999999999999999 4 22 3799999999999999999999999999999999
Q ss_pred eCCHHHHHHHHHcCCCCcEEEEecCCHHHHHHHHHhcceeEEEECCcCCCCCCCCccCCCCCCCCCcchHHHHHhhhhce
Q 011130 402 YKDLDEVIQRSNASQYGLAAGVFTHNLDTANTLMRALRVGSVWINCFDVFDAAIPFGGYKQSGQGREKGSYSLSNYLQVK 481 (493)
Q Consensus 402 ~~~~~eai~~~n~~~~gl~a~v~t~d~~~~~~~~~~l~~g~V~VN~~~~~~~~~pfGG~~~SG~G~~~g~~~l~~~~~~k 481 (493)
|+|+||||+++|+++|||+++|||+|.+.++++++++++|+|+||+++...+.+||||+|+||+|+++|++++++|++.|
T Consensus 403 ~~~~deAi~~aN~~~~gLaa~v~t~d~~~a~~~~~~l~aG~V~iN~~~~~~~~~PfGG~k~SG~Gr~~G~~gl~~ft~~K 482 (517)
T 3r31_A 403 FDDEDEVLARANATEFGLAGGVFTADLARAHRVVDGLEAGTLWINTYNLCPVEIPFGGSKQSGFGRENSAAALEHYSELK 482 (517)
T ss_dssp ECCHHHHHHHHHCSSEESEEEEECSCHHHHHHHHHHSCCSEEEESSCCCCCTTSCBCCEETTEECCBSTGGGGGGSEEEE
T ss_pred eCCHHHHHHHHhCCCCCeeEEEEeCCHHHHHHHHHHCCcceEEECCCCCCCCCCCcCCcCcCCCCcCchHHHHHHhhceE
Confidence 99999999999999999999999999999999999999999999998888899999999999999999999999999999
Q ss_pred EEEEeC
Q 011130 482 AVVTAL 487 (493)
Q Consensus 482 ~v~~~~ 487 (493)
+|+++.
T Consensus 483 ~v~~~~ 488 (517)
T 3r31_A 483 TVYVST 488 (517)
T ss_dssp EEEECC
T ss_pred EEEEcC
Confidence 999875
No 15
>3jz4_A Succinate-semialdehyde dehydrogenase [NADP+]; tetramer, NADP binding, oxidoreductase; HET: NAP; 2.30A {Escherichia coli}
Probab=100.00 E-value=9.5e-89 Score=716.07 Aligned_cols=418 Identities=35% Similarity=0.620 Sum_probs=398.5
Q ss_pred cccceeCCEeeeCCCCCeeeeecCCCCCeEEEEecCCHHHHHHHHHHHHHHccCCCCCCCCHHHHHHHHHHHHHHHHHhH
Q 011130 65 YTQLLINGQFVDSASGKTFPTLDPRTGDVITHVAEGEAEDVNRAVSAARKAFDEGPWPRMTAYERSKIILRFADLLERHN 144 (493)
Q Consensus 65 ~~~~~I~G~~~~~~~~~~~~v~~P~tg~~i~~v~~~~~~~v~~av~~A~~A~~~~~w~~~~~~~R~~iL~~la~~l~~~~ 144 (493)
..++||||+|+.+.++++++++||+||+++++++.++.+|+++++++|++||+ .|+.++..+|.++|++++++|+++.
T Consensus 9 ~~~~~i~g~~~~~~~~~~~~~~~P~t~~~i~~~~~~~~~~v~~av~~A~~A~~--~w~~~~~~~R~~~L~~~a~~l~~~~ 86 (481)
T 3jz4_A 9 RQQALINGEWLDANNGEAIDVTNPANGDKLGSVPKMGADETRAAIDAANRALP--AWRALTAKERATILRNWFNLMMEHQ 86 (481)
T ss_dssp CCSEEETTEEECCTTCCEEEEECTTTCCEEEEEECBCHHHHHHHHHHHHHHHH--HHHHSCHHHHHHHHHHHHHHHHHTH
T ss_pred ccceeECCEEecCCCCCeEEeECCCCCCEEEEEcCCCHHHHHHHHHHHHHHHH--hcccCCHHHHHHHHHHHHHHHHHHH
Confidence 34789999999887889999999999999999999999999999999999999 9999999999999999999999999
Q ss_pred HHHHHHHHHHcCCChhhhhhccHHHHHHHHHHHHHhhHHhcCccCCCC-CCceeEEEeeeeeeE----------------
Q 011130 145 DEIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADKIQGLTAPAD-GPYHVQTLHEPIGVA---------------- 207 (493)
Q Consensus 145 ~ela~~~~~e~Gk~~~~a~~~Ev~~~~~~l~~~a~~~~~~~~~~~~~~-~~~~~~~~~~PlGVv---------------- 207 (493)
++|++++++|+|||..+++. |+..+++.++|++.+..+..+...+.. .+...++.++|+|||
T Consensus 87 ~~la~~~~~e~Gk~~~~a~~-ev~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~PwN~P~~~~~~~ 165 (481)
T 3jz4_A 87 DDLARLMTLEQGKPLAEAKG-EISYAASFIEWFAEEGKRIYGDTIPGHQADKRLIVIKQPIGVTAAITPWNFPAAMITRK 165 (481)
T ss_dssp HHHHHHHHHHHCCCHHHHHH-HHHHHHHHHHHHHHHGGGCCEEEECCSSTTEEEEEEEEECCEEEEECCSSSTTHHHHHH
T ss_pred HHHHHHHHHHcCCCHHHHHH-HHHHHHHHHHHHHHHHHHhcCccccccCCCceEEEEEcCccEEEEECCCcchHHHHHHH
Confidence 99999999999999999985 999999999999998877666554432 356788999999999
Q ss_pred -------------------------------------eEEEeeeCCccchhhhhhccccccEEEEecCcHHHHHHHHHHh
Q 011130 208 -------------------------------------GVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLAA 250 (493)
Q Consensus 208 -------------------------------------gvv~vv~~~~~~~~~~L~~~~~v~~v~fTGs~~~g~~v~~~a~ 250 (493)
|++|+|++.+.++++.|+.||+||+|+||||+.+|+.|++.++
T Consensus 166 ~~~ALaaGN~VVlKps~~tp~~~~~l~~l~~~aGlP~gvv~vv~g~~~~~g~~L~~~p~v~~I~fTGS~~~g~~i~~~aa 245 (481)
T 3jz4_A 166 AGPALAAGCTMVLKPASQTPFSALALAELAIRAGVPAGVFNVVTGSAGAVGNELTSNPLVRKLSFTGSTEIGRQLMEQCA 245 (481)
T ss_dssp HHHHHHHTCEEEEECCTTSCHHHHHHHHHHHHHTCCTTTEEECCBCTHHHHHHHHHCTTEEEEEEESCHHHHHHHHHHHT
T ss_pred HHHHHHcCCEEEEECCCCCcHHHHHHHHHHHHhCcCCCeEEEEeCCChHHHHHHHhCCCcCEEEEECCHHHHHHHHHHHh
Confidence 8999999988889999999999999999999999999999999
Q ss_pred hcCCCceeEecCCCCceEEccCCCHHHHHHHHHHHHHhhcCCcccCCCeeEecchhHHHHHHHHHHHHhhcccCCCCCCC
Q 011130 251 KSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMKRVVGDPFKGG 330 (493)
Q Consensus 251 ~~~~~pv~lelgG~~p~iV~~daDl~~aa~~i~~~~~~~~GQ~C~a~~~v~V~~~i~d~f~~~l~~~~~~~~vg~p~~~~ 330 (493)
+ ++||+++|||||||+||++|||++.|++.+++++|.|+||.|+++++||||++++|+|+++|+++++++++|+|.+++
T Consensus 246 ~-~~~~v~lElGGk~p~iV~~dADl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~~G~p~~~~ 324 (481)
T 3jz4_A 246 K-DIKKVSLELGGNAPFIVFDDADLDKAVEGALASKFRNAGQTCVCANRLYVQDGVYDRFAEKLQQAMSKLHIGDGLDNG 324 (481)
T ss_dssp T-TTCEEEEECCCCEEEEECTTSCHHHHHHHHHHHHHGGGGCSTTSEEEEEEEGGGHHHHHHHHHHHHTTCCBSCTTSTT
T ss_pred h-cCCceEEecCCCCeEEEcCCCCHHHHHHHHHHHHHHhCCCcccCCcEEEEeHHHHHHHHHHHHHHHHhccCCCCccCc
Confidence 8 899999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CccccCCCHHHHHHHHHHHHHHHhCCCEEEeCCcccCCCCceeeceEEecCCCCccccccccccceEEEEEeCCHHHHHH
Q 011130 331 IQQGPQIDSEQFEKILKYIRSGVDGGAKLETGGERLGAKGYYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYKDLDEVIQ 410 (493)
Q Consensus 331 ~~~gpli~~~~~~~~~~~i~~a~~~ga~v~~gg~~~~~~g~~~~Ptvl~~~~~~~~i~~~E~fgPvl~v~~~~~~~eai~ 410 (493)
+++||++++.+++++.++|++++++|+++++||...+..|+|++|||+.+++++|++++||+||||++|++|+|+||||+
T Consensus 325 ~~~gpli~~~~~~~v~~~i~~a~~~Ga~v~~gg~~~~~~g~~~~Ptvl~~v~~~~~i~~eEiFGPVl~v~~~~~~deAi~ 404 (481)
T 3jz4_A 325 VTIGPLIDEKAVAKVEEHIADALEKGARVVCGGKAHERGGNFFQPTILVDVPANAKVSKEETFGPLAPLFRFKDEADVIA 404 (481)
T ss_dssp CCBCCCSCHHHHHHHHHHHHHHHHTTCEEEECCSBCTTCTTCBCCEEEESCCTTSGGGTSCCCSSEEEEEEECCHHHHHH
T ss_pred CccccccCHHHHHHHHHHHHHHHHCCCEEEeCCcccCCCCceeccEEEecCCCCcccccccccCceEEEEEECCHHHHHH
Confidence 99999999999999999999999999999999986555689999999999999999999999999999999999999999
Q ss_pred HHHcCCCCcEEEEecCCHHHHHHHHHhcceeEEEECCcCCCCCCCCccCCCCCCCCCcchHHHHHhhhhceEEEEe
Q 011130 411 RSNASQYGLAAGVFTHNLDTANTLMRALRVGSVWINCFDVFDAAIPFGGYKQSGQGREKGSYSLSNYLQVKAVVTA 486 (493)
Q Consensus 411 ~~n~~~~gl~a~v~t~d~~~~~~~~~~l~~g~V~VN~~~~~~~~~pfGG~~~SG~G~~~g~~~l~~~~~~k~v~~~ 486 (493)
++|+++|||+++|||+|.++++++++++++|+||||++....+.+||||+|+||+|+++|.+++++|++.|+|++.
T Consensus 405 ~aN~~~~gL~a~v~t~d~~~a~~~~~~l~~G~v~iN~~~~~~~~~PfGG~k~SG~G~~~g~~g~~~~t~~k~v~~~ 480 (481)
T 3jz4_A 405 QANDTEFGLAAYFYARDLSRVFRVGEALEYGIVGINTGIISNEVAPFGGIKASGLGREGSKYGIEDYLEIKYMCIG 480 (481)
T ss_dssp HHHCSSCCSEEEEECCBHHHHHHHHHHCCCSEEEESCSCCCCSSSCBCCSGGGEESCBSHHHHHHTTEEEEEEEEE
T ss_pred HHhcCCCCceEEEECCCHHHHHHHHHhCCeeeEEECCCCCCCCCCCcCCcccCcCCCCchHHHHHHhhceeEEEEe
Confidence 9999999999999999999999999999999999999877788999999999999999999999999999999875
No 16
>3i44_A Aldehyde dehydrogenase; oxidoreductase, structural genomics, seattle structural genomics center for infectious disease, ssgcid; 2.00A {Bartonella henselae}
Probab=100.00 E-value=8e-89 Score=717.13 Aligned_cols=427 Identities=31% Similarity=0.533 Sum_probs=390.4
Q ss_pred cCCCCCCCCCC-ccccceeCCEeeeCCCCCeeeeecCCCCCeEEEEecCCHHHHHHHHHHHHHHccCCCCCCCCHHHHHH
Q 011130 53 AEDPITPPVKV-DYTQLLINGQFVDSASGKTFPTLDPRTGDVITHVAEGEAEDVNRAVSAARKAFDEGPWPRMTAYERSK 131 (493)
Q Consensus 53 ~~~~~~~~~~~-~~~~~~I~G~~~~~~~~~~~~v~~P~tg~~i~~v~~~~~~~v~~av~~A~~A~~~~~w~~~~~~~R~~ 131 (493)
++.+...+..+ +..++||||+|+.+.++++++++||+||+++++++.++.+|+++||++|++||+ .|++++..+|.+
T Consensus 12 ~~~~~~~~~~m~~~~~~~I~G~~~~~~~~~~~~v~nP~tg~~i~~v~~~~~~dv~~av~aA~~A~~--~w~~~~~~~R~~ 89 (497)
T 3i44_A 12 LEAQTQGPGSMLNKRKFYINGLWDDPSTPHDLYVIDPSTEEACAVISLGSTRDADKAINAAKKAFQ--TWKTTSPHERLG 89 (497)
T ss_dssp ----------CEEECCEEETTEEECCSSCCEEEEEETTTTEEEEEEECCCHHHHHHHHHHHHHHHH--HHTTSCHHHHHH
T ss_pred hhhhhcCCcccccccCeeECCEEecCCCCCeEEeECCCCCCEEEEEcCCCHHHHHHHHHHHHHHHH--HHccCCHHHHHH
Confidence 34444444444 467899999999887788999999999999999999999999999999999999 999999999999
Q ss_pred HHHHHHHHHHHhHHHHHHHHHHHcCCChhhhhhccHHHHHHHHHHHHHhhHHhcCccCCCCCCceeEEE-eeeeeeE---
Q 011130 132 IILRFADLLERHNDEIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADKIQGLTAPADGPYHVQTL-HEPIGVA--- 207 (493)
Q Consensus 132 iL~~la~~l~~~~~ela~~~~~e~Gk~~~~a~~~Ev~~~~~~l~~~a~~~~~~~~~~~~~~~~~~~~~~-~~PlGVv--- 207 (493)
+|++++++|+++.++|++++++|+|||+.+++..|+..+++.++++++..+.......+. .+...++. ++|+|||
T Consensus 90 ~L~~~a~~l~~~~~ela~~~~~e~Gk~~~~a~~~ev~~~~~~~~~~a~~~~~~~~~~~~~-~~~~~~~~~~~P~GVv~~I 168 (497)
T 3i44_A 90 FVEKILEIYEKRSSDMAKTISMEMGAPIDMALNAQTATGSSHIRNFIKAYKEFSFQEALI-EGNEQAILHYDAIGVVGLI 168 (497)
T ss_dssp HHHHHHHHHHHTHHHHHHHHHHHHCCCHHHHHHTHHHHHHHHHHHHHHHHHHCCSEEESS-TTCSSCEEEEEECCEEEEE
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHhhccccccccc-CCceeEEEeecCceEEEEE
Confidence 999999999999999999999999999999984599999999999998876654332221 13345677 9999998
Q ss_pred --------------------------------------------------eEEEeeeCCccchhhhhhccccccEEEEec
Q 011130 208 --------------------------------------------------GVLNIVSGYGPTAGAALASHMEVDKLAFTG 237 (493)
Q Consensus 208 --------------------------------------------------gvv~vv~~~~~~~~~~L~~~~~v~~v~fTG 237 (493)
|++|+|++.+.++++.|+.||+||+|+|||
T Consensus 169 ~PwN~P~~~~~~~~a~ALaaGN~VVlKps~~tp~t~~~l~~l~~eaGlP~gvvnvv~g~~~~~g~~L~~hp~v~~I~FTG 248 (497)
T 3i44_A 169 TPWNWPMNQVTLKVIPALLAGCTMVLKPSEIAPLSAMLFAEILDEAALPSGVFNLINGDGANVGSYLSAHPDLEMISFTG 248 (497)
T ss_dssp CCSSSHHHHHHHHHHHHHHHTCEEEEECCTTSCHHHHHHHHHHHHTTCCTTSEEECCCCTTTHHHHHHHCTTCCEEEEES
T ss_pred CCCcchHHHHHHHHHHHHHcCCEEEEECCcccHHHHHHHHHHHHHhCcCCCeEEEEeCCChHHHHHHHhCCCcCEEEEeC
Confidence 899999998888999999999999999999
Q ss_pred CcHHHHHHHHHHhhcCCCceeEecCCCCceEEccCCCHHHHHHHHHHHHHhhcCCcccCCCeeEecchhHHHHHHHHHHH
Q 011130 238 STTTGKIVLQLAAKSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFVEKANAL 317 (493)
Q Consensus 238 s~~~g~~v~~~a~~~~~~pv~lelgG~~p~iV~~daDl~~aa~~i~~~~~~~~GQ~C~a~~~v~V~~~i~d~f~~~l~~~ 317 (493)
|+.+|+.|++.+++ ++||+++|||||||+||++||| +.|++.++.++|.|+||.|++++|||||+++||+|+++|+++
T Consensus 249 S~~~G~~i~~~aa~-~~k~v~lElGGk~p~IV~~dAD-~~Aa~~i~~~~f~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~ 326 (497)
T 3i44_A 249 STRAGKDISKNASN-TLKRVCLELGGKGANIIFADAD-IDALQRGVRHCFYNSGQSCNAPTRMLVEQAIYDKAIKTAKDI 326 (497)
T ss_dssp CHHHHHHHHHHHHT-TTCEEEEECCCCCEEEECTTSC-TTHHHHHHHHHHGGGGCCTTCCCEEEEEGGGHHHHHHHHHHH
T ss_pred cHHHHHHHHHHHhh-cCCceeeccCCCCceEECCChh-HHHHHHHHHHHHhcCCCCcccCCEEEEcHHHHHHHHHHHHHH
Confidence 99999999999998 8999999999999999999999 999999999999999999999999999999999999999999
Q ss_pred HhhcccCCCCCCCCccccCCCHHHHHHHHHHHHHHHhCCCEEEeCCc-ccC--CCCceeeceEEecCCCCcccccccccc
Q 011130 318 AMKRVVGDPFKGGIQQGPQIDSEQFEKILKYIRSGVDGGAKLETGGE-RLG--AKGYYIKPTVFTGVKDDMLIAKDEIFG 394 (493)
Q Consensus 318 ~~~~~vg~p~~~~~~~gpli~~~~~~~~~~~i~~a~~~ga~v~~gg~-~~~--~~g~~~~Ptvl~~~~~~~~i~~~E~fg 394 (493)
++++++|||.|+++++||++++.+++++.++|++++++|+++++||. ... ..|+|++|||+.+++++|++++||+||
T Consensus 327 ~~~~~vG~p~~~~~~~Gpli~~~~~~~v~~~i~~a~~~Ga~v~~gG~~~~~~~~~g~~~~PTvl~~v~~~~~i~~eEiFG 406 (497)
T 3i44_A 327 AEKTQVGPGHQTGNHIGPVVSKEQYDKIQDLIQSGIDEGATLVTGGTGLPMGMERGYYVRPTVFADVKPHMRIFREEIFG 406 (497)
T ss_dssp HHHCCBCCTTSCSSCBCCCSCHHHHHHHHHHHHHHHHTTCEEEECCSSCCTTCCSSCCCCCEEEESCCTTSHHHHSCCCS
T ss_pred HHhccCCCCCCCCCccCCCcCHHHHHHHHHHHHHHHHCCCEEEECCCcCCCcCCCCcEECCEEEEeCCCCCHHHcCcccC
Confidence 99999999999999999999999999999999999999999999994 332 269999999999999999999999999
Q ss_pred ceEEEEEeCCHHHHHHHHHcCCCCcEEEEecCCHHHHHHHHHhcceeEEEECCcCCCCCCCCccCCCCCCCCCcchHHHH
Q 011130 395 PVQSILKYKDLDEVIQRSNASQYGLAAGVFTHNLDTANTLMRALRVGSVWINCFDVFDAAIPFGGYKQSGQGREKGSYSL 474 (493)
Q Consensus 395 Pvl~v~~~~~~~eai~~~n~~~~gl~a~v~t~d~~~~~~~~~~l~~g~V~VN~~~~~~~~~pfGG~~~SG~G~~~g~~~l 474 (493)
||++|++|+|+||||+++|+++|||+++|||+|.+.++++++++++|+||||. ....+.+||||+|+||+|+++|.+++
T Consensus 407 PVl~v~~~~~~deAi~~aN~~~~GL~a~v~t~d~~~a~~~a~~l~aG~V~iN~-~~~~~~~PfGG~k~SG~Gr~~G~~gl 485 (497)
T 3i44_A 407 PVLSLLPFNTEDEAVTLANDTEYGLTNYIQSQDRSKCRRIAAQVRSGMVEVNG-HELPGGSYFGGVKFSGRAREGGLWGI 485 (497)
T ss_dssp SEEEEEEESSHHHHHHHHHCSSCCSEEEEECSCHHHHHHHHHHSCCSEEEETT-CCCCTTCCBCCSGGGCCCCBSHHHHH
T ss_pred ceEEEEecCCHHHHHHHHhCCCCCcEEEEECCCHHHHHHHHHhCCcCeEEECC-CCCCCCCCcCCcCcCcCCccchHHHH
Confidence 99999999999999999999999999999999999999999999999999995 55678899999999999999999999
Q ss_pred HhhhhceEEEE
Q 011130 475 SNYLQVKAVVT 485 (493)
Q Consensus 475 ~~~~~~k~v~~ 485 (493)
++|++.|+|+.
T Consensus 486 ~~~t~~K~v~~ 496 (497)
T 3i44_A 486 KEFLDTKAISY 496 (497)
T ss_dssp HTTEEEEEESC
T ss_pred HHhcceeEEEe
Confidence 99999999853
No 17
>1wnd_A Putative betaine aldehyde dehydrogenase; NADH, fluorescence, kinetics, oxidor; 2.10A {Escherichia coli} SCOP: c.82.1.1 PDB: 1wnb_A
Probab=100.00 E-value=8.1e-89 Score=716.77 Aligned_cols=417 Identities=35% Similarity=0.609 Sum_probs=394.4
Q ss_pred cccceeCCEeeeCCCCCeeeeecCCCCCeEEEEecCCHHHHHHHHHHHHHHccCCCCCCCCHHHHHHHHHHHHHHHHHhH
Q 011130 65 YTQLLINGQFVDSASGKTFPTLDPRTGDVITHVAEGEAEDVNRAVSAARKAFDEGPWPRMTAYERSKIILRFADLLERHN 144 (493)
Q Consensus 65 ~~~~~I~G~~~~~~~~~~~~v~~P~tg~~i~~v~~~~~~~v~~av~~A~~A~~~~~w~~~~~~~R~~iL~~la~~l~~~~ 144 (493)
..++||||+|+.+.+ ++++++||+||+++++++.++.+|+++++++|++||+ .|++++..+|.++|++++++|+++.
T Consensus 23 ~~~~~i~G~~~~~~~-~~~~v~nP~tg~~i~~~~~~~~~~v~~av~~A~~A~~--~w~~~~~~~R~~~L~~~a~~l~~~~ 99 (495)
T 1wnd_A 23 QHKLLINGELVSGEG-EKQPVYNPATGDVLLEIAEASAEQVDAAVRAADAAFA--EWGQTTPKVRAECLLKLADVIEENG 99 (495)
T ss_dssp CCCEEETTEEECCCS-CEEEEEETTTTEEEEEEECCCHHHHHHHHHHHHHHHH--HHTTSCHHHHHHHHHHHHHHHHHTH
T ss_pred ccCeEECCEEecCCC-CeEEEECCCCCCEEEEEeCCCHHHHHHHHHHHHHHHH--HhhhCCHHHHHHHHHHHHHHHHHHH
Confidence 357899999997655 8899999999999999999999999999999999999 8999999999999999999999999
Q ss_pred HHHHHHHHHHcCCChhhhhhccHHHHHHHHHHHHHhhHHhcCccCCCC-CCceeEEEeeeeeeE----------------
Q 011130 145 DEIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADKIQGLTAPAD-GPYHVQTLHEPIGVA---------------- 207 (493)
Q Consensus 145 ~ela~~~~~e~Gk~~~~a~~~Ev~~~~~~l~~~a~~~~~~~~~~~~~~-~~~~~~~~~~PlGVv---------------- 207 (493)
++|++++++|+|||+.++...|+..+++.++|++++++++.+...+.. .+...++.++|+|||
T Consensus 100 ~ela~~~~~e~Gk~~~ea~~~Ev~~~~~~~~~~a~~~~~~~g~~~~~~~~~~~~~~~~~P~GVV~~I~PwN~P~~~~~~~ 179 (495)
T 1wnd_A 100 QVFAELESRNCGKPLHSAFNDEIPAIVDVFRFFAGAARCLNGLAAGEYLEGHTSMIRRDPLGVVASIAPWNYPLMMAAWK 179 (495)
T ss_dssp HHHHHHHHHHHCCCHHHHHHTHHHHHHHHHHHHHHHTTCCEEECBEEEETTEEEEEEEEECSEEEEECCSSSHHHHHHHH
T ss_pred HHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHhcCccccCCCCCceeEEeeecCCeEEEECCCcchHHHHHHH
Confidence 999999999999999998755999999999999999888766544432 234678899999998
Q ss_pred ------------------------------------eEEEeeeCCccchhhhhhccccccEEEEecCcHHHHHHHHHHhh
Q 011130 208 ------------------------------------GVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLAAK 251 (493)
Q Consensus 208 ------------------------------------gvv~vv~~~~~~~~~~L~~~~~v~~v~fTGs~~~g~~v~~~a~~ 251 (493)
|++|+|+|.+.++++.|+.||+||+|+||||+.+|+.|++.+++
T Consensus 180 ~a~ALaaGN~VVlKps~~tp~t~~~l~~l~~ealP~gvv~vv~g~~~~~g~~L~~~p~vd~I~FTGS~~~G~~i~~~aa~ 259 (495)
T 1wnd_A 180 LAPALAAGNCVVLKPSEITPLTALKLAELAKDIFPAGVVNILFGRGKTVGDPLTGHPKVRMVSLTGSIATGEHIISHTAS 259 (495)
T ss_dssp HHHHHHTTCEEEEECCTTCCHHHHHHHHHHTTTSCTTSEEECCCCTTTTHHHHHTCTTEEEEEEESCHHHHHHHHHHHGG
T ss_pred HHHHHHcCCeeEeeCCCCChHHHHHHHHHHHHhCCcCeEEEEeCCCHHHHHHHHhCCCcCEEEEECcHHHHHHHHHHHHh
Confidence 99999999888889999999999999999999999999999998
Q ss_pred cCCCceeEecCCCCceEEccCCCHHHHHHHHHHHHHhhcCCcccCCCeeEecchhHHHHHHHHHHHHhhcccCCCCCCCC
Q 011130 252 SNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMKRVVGDPFKGGI 331 (493)
Q Consensus 252 ~~~~pv~lelgG~~p~iV~~daDl~~aa~~i~~~~~~~~GQ~C~a~~~v~V~~~i~d~f~~~l~~~~~~~~vg~p~~~~~ 331 (493)
++||+++|||||||+||++|||++.|++.+++++|.|+||.|++++|||||++++|+|+++|+++++++++|||.|+++
T Consensus 260 -~l~~v~lELGGk~p~iV~~dADl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~~g~p~~~~~ 338 (495)
T 1wnd_A 260 -SIKRTHMELGGKAPVIVFDDADIEAVVEGVRTFGYYNAGQDCTAACRIYAQKGIYDTLVEKLGAAVATLKSGAPDDEST 338 (495)
T ss_dssp -GTCEEEEECCCCCEEEECTTSCHHHHHHHHHHHTTGGGGCSTTCCCEEEEETTTHHHHHHHHHHHHHTCCBCCTTSTTC
T ss_pred -cCCccccccCCCCeEEECCcCCHHHHHHHHHHHHHhcCCCCCCCCcEEEecchhHHHHHHHHHHHHHhccCCCCccCCC
Confidence 8999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ccccCCCHHHHHHHHHHHHHHHhCC-CEEEeCCc-ccCCCCceeeceEEecCCCCccccccccccceEEEEEeCCHHHHH
Q 011130 332 QQGPQIDSEQFEKILKYIRSGVDGG-AKLETGGE-RLGAKGYYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYKDLDEVI 409 (493)
Q Consensus 332 ~~gpli~~~~~~~~~~~i~~a~~~g-a~v~~gg~-~~~~~g~~~~Ptvl~~~~~~~~i~~~E~fgPvl~v~~~~~~~eai 409 (493)
++|||+++.+++++.++|++++++| +++++||. .. +.|+|++|||+.+++++|++++||+||||++|++|+|+||||
T Consensus 339 ~~Gpli~~~~~~rv~~~i~~a~~~G~a~~~~gG~~~~-~~g~~~~PTvl~~v~~~~~i~~eEiFGPVl~v~~~~~~deAi 417 (495)
T 1wnd_A 339 ELGPLSSLAHLERVGKAVEEAKATGHIKVITGGEKRK-GNGYYYAPTLLAGALQDDAIVQKEVFGPVVSVTPFDNEEQVV 417 (495)
T ss_dssp CBCCCSCHHHHHHHHHHHHHHHHTSSCEEEECCSBCS-SSSCCBCCEEEECCCTTSHHHHSCCCSSEEEEEEECCHHHHH
T ss_pred CccCCCCHHHHHHHHHHHHHHHhCCCeEEEECCcccC-CCCCeeCCEEEeCCCCCChhhhccccCceEEEEEeCCHHHHH
Confidence 9999999999999999999999999 99999997 43 368999999999999999999999999999999999999999
Q ss_pred HHHHcCCCCcEEEEecCCHHHHHHHHHhcceeEEEECCcCCCCCCCCccCCCCCCCCCcchHHHHHhhhhceEEEEe
Q 011130 410 QRSNASQYGLAAGVFTHNLDTANTLMRALRVGSVWINCFDVFDAAIPFGGYKQSGQGREKGSYSLSNYLQVKAVVTA 486 (493)
Q Consensus 410 ~~~n~~~~gl~a~v~t~d~~~~~~~~~~l~~g~V~VN~~~~~~~~~pfGG~~~SG~G~~~g~~~l~~~~~~k~v~~~ 486 (493)
+++|+++|||+++|||+|.+.++++++++++|+|+||+++...+.+||||+|.||+|+++|.+++++|++.|+|+.+
T Consensus 418 ~~aN~~~~gL~a~v~t~d~~~a~~~~~~l~aG~V~iN~~~~~~~~~PfGG~k~SG~Gr~~G~~gl~~f~~~k~v~~~ 494 (495)
T 1wnd_A 418 NWANDSQYGLASSVWTKDVGRAHRVSARLQYGCTWVNTHFMLVSEMPHGGQKLSGYGKDMSLYGLEDYTVVRHVMVK 494 (495)
T ss_dssp HHHHSSSCCSEEEEECSBHHHHHHHHHHCCSSEEEESCCCCCCTTSCBCCSGGGEECCBSHHHHHHTTEEEEEEEEE
T ss_pred HHHhcCCCCeeEEEECCCHHHHHHHHHhCCcceEEECCCCCCCCCCCCCCCCcCcCCccchHHHHHHhhCeEEEEec
Confidence 99999999999999999999999999999999999999877778999999999999999999999999999999875
No 18
>1a4s_A ALDH, betaine aldehyde dehydrogenase; oxidoreductase, aldehyde oxidation; 2.10A {Gadus callarias} SCOP: c.82.1.1 PDB: 1bpw_A*
Probab=100.00 E-value=6.5e-89 Score=719.46 Aligned_cols=419 Identities=37% Similarity=0.658 Sum_probs=396.2
Q ss_pred ccccceeCCEeeeCCCCCe-eeeecCCCCCeEEEEecCCHHHHHHHHHHHHHHccCCCCCCCCHHHHHHHHHHHHHHHHH
Q 011130 64 DYTQLLINGQFVDSASGKT-FPTLDPRTGDVITHVAEGEAEDVNRAVSAARKAFDEGPWPRMTAYERSKIILRFADLLER 142 (493)
Q Consensus 64 ~~~~~~I~G~~~~~~~~~~-~~v~~P~tg~~i~~v~~~~~~~v~~av~~A~~A~~~~~w~~~~~~~R~~iL~~la~~l~~ 142 (493)
...++||||+|+.+.++++ ++++||+||+++++++.++.+|+++++++|++||+ .|++++..+|.++|++++++|++
T Consensus 18 ~~~~~~i~g~~~~~~~~~~~~~v~nP~tg~~i~~~~~~~~~dv~~av~aA~~A~~--~w~~~~~~~R~~~L~~~a~~l~~ 95 (503)
T 1a4s_A 18 TDDLNYWGGRRIKSKDGATTEPVFEPATGRVLCQMVPCGAEEVDQAVQSAQAAYL--KWSKMAGIERSRVMLEAARIIRE 95 (503)
T ss_dssp CSCCEEETTEEECCCTTCCCEEEECTTTCCEEEEECCCCHHHHHHHHHHHHHHHH--HHTTSCHHHHHHHHHHHHHHHHH
T ss_pred cccceeECCEEecCCCCCceEEEECCCCCCEEEEEeCCCHHHHHHHHHHHHHHHH--hcccCCHHHHHHHHHHHHHHHHH
Confidence 3457899999998766788 99999999999999999999999999999999999 99999999999999999999999
Q ss_pred hHHHHHHHHHHHcCCChhhhhhccHHHHHHHHHHHHHhhHHhcCccCCCCCCceeEEEeeeeeeE---------------
Q 011130 143 HNDEIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADKIQGLTAPADGPYHVQTLHEPIGVA--------------- 207 (493)
Q Consensus 143 ~~~ela~~~~~e~Gk~~~~a~~~Ev~~~~~~l~~~a~~~~~~~~~~~~~~~~~~~~~~~~PlGVv--------------- 207 (493)
|.++|++++++|+|||+.++.. |+..+++.++|++++++++.+...+...+...++.++|+|||
T Consensus 96 ~~~ela~~~~~e~Gk~~~ea~~-ev~~~~~~~~~~a~~~~~~~g~~~~~~~~~~~~~~~~P~GVv~~I~PwN~P~~~~~~ 174 (503)
T 1a4s_A 96 RRDNIAKLEVINNGKTITEAEY-DIDAAWQCIEYYAGLAPTLSGQHIQLPGGAFAYTRREPLGVCAGILAWNYPFMIAAW 174 (503)
T ss_dssp THHHHHHHHHHHHCCCHHHHHH-HHHHHHHHHHHHHHHGGGCCEEEEECGGGCEEEEEEEECSEEEEECCSSSHHHHHHH
T ss_pred HHHHHHHHHHHHhCCCHHHHHH-HHHHHHHHHHHHHHHHHHhcCCcccCCCCceeEEEEecCceEEEECCCcchHHHHHH
Confidence 9999999999999999999875 999999999999999988766544333334678899999998
Q ss_pred --------------------------------------eEEEeeeCCccchhhhhhccccccEEEEecCcHHHHHHHHHH
Q 011130 208 --------------------------------------GVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLA 249 (493)
Q Consensus 208 --------------------------------------gvv~vv~~~~~~~~~~L~~~~~v~~v~fTGs~~~g~~v~~~a 249 (493)
|++|+|++.+ ++++.|+.||+||+|+||||+.+|+.|++.+
T Consensus 175 ~~a~ALaaGN~VVlKps~~tp~ta~~l~~l~~~aGlP~gvv~vv~g~~-~~g~~L~~~p~v~~V~FTGS~~~G~~i~~~a 253 (503)
T 1a4s_A 175 KCAPALACGNAVVFKPSPMTPVTGVILAEIFHEAGVPVGLVNVVQGGA-ETGSLLCHHPNVAKVSFTGSVPTGKKVMEMS 253 (503)
T ss_dssp HHHHHHHTTCEEEEECCTTSCHHHHHHHHHHHHTTCCTTSEEECCCSH-HHHHHHHHCTTCCEEEEESCHHHHHHHHHHH
T ss_pred HHHHHHHcCCEEEEECCCCChHHHHHHHHHHHHhCCCcCeEEEEecCc-hHHHHHHhCCCcCEEEEeCCHHHHHHHHHHh
Confidence 8999999977 8899999999999999999999999999999
Q ss_pred hhcCCCceeEecCCCCceEEccCCCHHHHHHHHHHHHHhhcCCcccCCCeeEecchhHHHHHHHHHHHHhhcccCCCCCC
Q 011130 250 AKSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMKRVVGDPFKG 329 (493)
Q Consensus 250 ~~~~~~pv~lelgG~~p~iV~~daDl~~aa~~i~~~~~~~~GQ~C~a~~~v~V~~~i~d~f~~~l~~~~~~~~vg~p~~~ 329 (493)
++ ++||+++|||||||+||++|||++.|++.+++++|.|+||.|++++|||||+++||+|+++|+++++++++|||.|+
T Consensus 254 a~-~~~~v~lELGGk~p~IV~~dADl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~~G~p~~~ 332 (503)
T 1a4s_A 254 AK-TVKHVTLELGGKSPLLIFKDCELENAVRGALMANFLTQGQVCTNGTRVFVQREIMPQFLEEVVKRTKAIVVGDPLLT 332 (503)
T ss_dssp HT-TTCEEEEECCCCCEEEECTTSCHHHHHHHHHHTTCGGGGCCTTCCCEEEEEGGGHHHHHHHHHHHHHTCCBSCTTST
T ss_pred hh-cCCceEEecCCcCeEEECCCCCHHHHHHHHHHHHHhcCCCCCcCCcEEEEehHHHHHHHHHHHHHHHhcCCCCCccc
Confidence 98 89999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCccccCCCHHHHHHHHHHHHHHHhCCCEEEeCCccc--C----CCCceeeceEEecCCCCccccccccccceEEEEEeC
Q 011130 330 GIQQGPQIDSEQFEKILKYIRSGVDGGAKLETGGERL--G----AKGYYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYK 403 (493)
Q Consensus 330 ~~~~gpli~~~~~~~~~~~i~~a~~~ga~v~~gg~~~--~----~~g~~~~Ptvl~~~~~~~~i~~~E~fgPvl~v~~~~ 403 (493)
++++||++++.+++++.++|++++++|+++++||... + ..|+|++|||+.+++++|++++||+||||++|++|+
T Consensus 333 ~~~~gpli~~~~~~rv~~~i~~a~~~Ga~~~~gG~~~~~~~~~~~~g~~~~PTvl~~v~~~~~i~~eEiFGPVl~v~~~~ 412 (503)
T 1a4s_A 333 ETRMGGLISKPQLDKVLGFVAQAKKEGARVLCGGEPLTPSDPKLKNGYFMSPCVLDNCRDDMTCVKEEIFGPVMSVLPFD 412 (503)
T ss_dssp TCCBCCCSCHHHHHHHHHHHHHHHHHTCEEEECCSBCCCSSGGGTTSCCBCCEEEESCCTTSHHHHSCCCSSEEEEEEEC
T ss_pred CCccCCCcCHHHHHHHHHHHHHHHHCCCEEEeCCcccccccccccCCceeCCEEEecCCCCCHHHhccccCceEEEEecC
Confidence 9999999999999999999999999999999999764 2 368999999999999999999999999999999999
Q ss_pred CHHHHHHHHHcCCCCcEEEEecCCHHHHHHHHHhcceeEEEECCcCCCCCCCCccCCCCCCCCCcchHHHHHhhhhceEE
Q 011130 404 DLDEVIQRSNASQYGLAAGVFTHNLDTANTLMRALRVGSVWINCFDVFDAAIPFGGYKQSGQGREKGSYSLSNYLQVKAV 483 (493)
Q Consensus 404 ~~~eai~~~n~~~~gl~a~v~t~d~~~~~~~~~~l~~g~V~VN~~~~~~~~~pfGG~~~SG~G~~~g~~~l~~~~~~k~v 483 (493)
|+||||+++|+++|||+++|||+|.+.++++++++++|+||||++....+.+||||+|+||+|+++|.+++++|++.|+|
T Consensus 413 ~~deAi~~aN~~~~gL~a~v~t~d~~~a~~~~~~l~aG~V~vN~~~~~~~~~PfGG~k~SG~G~~~G~~~l~~f~~~k~v 492 (503)
T 1a4s_A 413 TEEEVLQRANNTTFGLASGVFTRDISRAHRVAANLEAGTCYINTYSISPVEVPFGGYKMSGFGRENGQATVDYYSQLKTV 492 (503)
T ss_dssp CHHHHHHHHHCSSCCSEEEEECSBHHHHHHHHHHSCSSEEEESCCCCCCTTSCBCCSGGGEECCBSTTGGGGGSEEEEEE
T ss_pred CHHHHHHHHhcCCCCceEEEECCCHHHHHHHHHHCceeEEEECCCCCCCCCCCCCCcCCCCCCccchHHHHHHhcCceEE
Confidence 99999999999999999999999999999999999999999999877788999999999999999999999999999999
Q ss_pred EEeC
Q 011130 484 VTAL 487 (493)
Q Consensus 484 ~~~~ 487 (493)
+++.
T Consensus 493 ~~~~ 496 (503)
T 1a4s_A 493 IVEM 496 (503)
T ss_dssp EECC
T ss_pred EEcc
Confidence 8864
No 19
>2ve5_A BADH, betaine aldehyde dehydrogenase; aldehyde oxidation, NAD, NADP complex, oxidoreductase; HET: NAP CSO; 2.10A {Pseudomonas aeruginosa} PDB: 2wme_A* 2wox_A* 3zqa_A* 2xdr_A*
Probab=100.00 E-value=1.2e-88 Score=717.30 Aligned_cols=424 Identities=43% Similarity=0.734 Sum_probs=403.5
Q ss_pred CCccccceeCCEeeeCCCCCeeeeecCCCCCeEEEEecCCHHHHHHHHHHHHHHccCCCCCCCCHHHHHHHHHHHHHHHH
Q 011130 62 KVDYTQLLINGQFVDSASGKTFPTLDPRTGDVITHVAEGEAEDVNRAVSAARKAFDEGPWPRMTAYERSKIILRFADLLE 141 (493)
Q Consensus 62 ~~~~~~~~I~G~~~~~~~~~~~~v~~P~tg~~i~~v~~~~~~~v~~av~~A~~A~~~~~w~~~~~~~R~~iL~~la~~l~ 141 (493)
+++..++||||+|+.+.++++++++||+||+++++++.++.+|+++++++|++||+ .|+.++..+|.++|++++++|+
T Consensus 3 ~~~~~~~~I~G~~~~~~~~~~~~~~~P~tg~~~~~~~~~~~~~v~~av~~A~~A~~--~w~~~~~~~R~~~L~~~a~~l~ 80 (490)
T 2ve5_A 3 RFEEQKLYIGGRYVEASSGATFETINPANGEVLAKVQRASREDVERAVQSAVEGQK--VWAAMTAMQRSRILRRAVDILR 80 (490)
T ss_dssp CSCCBCEECSSSEECCSSSCEEEEECTTTCCEEEEEECCCHHHHHHHHHHHHHHHH--HHHHSCHHHHHHHHHHHHHHHH
T ss_pred ccccCCeeECCEEecCCCCCeEEeECCCCCCEEEEEcCCCHHHHHHHHHHHHHHHH--HhccCCHHHHHHHHHHHHHHHH
Confidence 45567899999999887889999999999999999999999999999999999999 9999999999999999999999
Q ss_pred HhHHHHHHHHHHHcCCChhhhhhccHHHHHHHHHHHHHhhHHhcCccCCCCCCceeEEEeeeeeeE--------------
Q 011130 142 RHNDEIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADKIQGLTAPADGPYHVQTLHEPIGVA-------------- 207 (493)
Q Consensus 142 ~~~~ela~~~~~e~Gk~~~~a~~~Ev~~~~~~l~~~a~~~~~~~~~~~~~~~~~~~~~~~~PlGVv-------------- 207 (493)
+|.++|++++++|+|||..+++..|+..+++.++|++++++++.+...+...+...++.++|+|||
T Consensus 81 ~~~~~la~~~~~e~Gk~~~ea~~~ev~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~pwN~P~~~~~ 160 (490)
T 2ve5_A 81 ERNDELAALETLDTGKPLAETRSVDIVTGADVLEYYAGLVPAIEGEQIPLRETSFVYTRREPLGVVAGIGAWNYPVQIAL 160 (490)
T ss_dssp HTHHHHHHHHHHHHCCCHHHHTTTHHHHHHHHHHHHHHHGGGCCEEEEEEETTEEEEEEEEECSEEEEECCSSSHHHHHH
T ss_pred HHHHHHHHHHHHHhCCCHHHHhHHHHHHHHHHHHHHHHHHHHhcCccccCCCCceeeEeeccccEEEEECCCcchHHHHH
Confidence 999999999999999999999855999999999999999988766655544566788999999998
Q ss_pred ---------------------------------------eEEEeeeCCccchhhhhhccccccEEEEecCcHHHHHHHHH
Q 011130 208 ---------------------------------------GVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQL 248 (493)
Q Consensus 208 ---------------------------------------gvv~vv~~~~~~~~~~L~~~~~v~~v~fTGs~~~g~~v~~~ 248 (493)
|++|+|++.+.++++.|+.||+||+|+||||+.+|+.|++.
T Consensus 161 ~~~~~ALaaGN~vVlKps~~tp~t~~~l~~l~~~aGlP~gvv~vv~g~~~~~~~~L~~~p~vd~v~fTGS~~~g~~i~~~ 240 (490)
T 2ve5_A 161 WKSAPALAAGNAMIFKPSEVTPLTALKLAEIYTEAGVPDGVFNVLTGSGREVGQWLTEHPLIEKISFTGGTSTGKKVMAS 240 (490)
T ss_dssp HHHHHHHHTTCEEEEECCTTSCHHHHHHHHHHHHHTCCTTSEEECCSCTTTHHHHHHHCTTCCEEEEESCHHHHHHHHHH
T ss_pred HHHHHHHHcCCEEEEECCCcchHHHHHHHHHHHHhCcCcCeEEEEeCCChHHHHHHHhCCCcCEEEEeCCcHHHHHHHHh
Confidence 89999999888899999999999999999999999999999
Q ss_pred H-hhcCCCceeEecCCCCceEEccCCCHHHHHHHHHHHHHhhcCCcccCCCeeEecchhHHHHHHHHHHHHhhcccCCCC
Q 011130 249 A-AKSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMKRVVGDPF 327 (493)
Q Consensus 249 a-~~~~~~pv~lelgG~~p~iV~~daDl~~aa~~i~~~~~~~~GQ~C~a~~~v~V~~~i~d~f~~~l~~~~~~~~vg~p~ 327 (493)
+ +. ++||+++|||||||+||++|||++.|++.+++++|.|+||.|+++++||||++++|+|+++|++++.++++|+|.
T Consensus 241 a~a~-~l~~v~lElGGk~p~iV~~dADl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~~g~p~ 319 (490)
T 2ve5_A 241 ASSS-SLKEVTMELGGKSPLIIFPDADLDRAADIAVMANFFSSGQVCTNGTRVFIHRSQQARFEAKVLERVQRIRLGDPQ 319 (490)
T ss_dssp HHHH-HCCEEEEECCCCCEEEECTTSCHHHHHHHHHHHHHGGGGCCTTCCCEEEEEGGGHHHHHHHHHHHHHTCCBSCTT
T ss_pred chhc-cccceEEEcCCCceeEECCCCCHHHHHHHHHHHHHhcCCCCccCCCeEEEcHHHHHHHHHHHHHHHHhccCCCCC
Confidence 9 77 899999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCccccCCCHHHHHHHHHHHHHHHhCCCEEEeCCcccC----CCCceeeceEEecCCCCccccccccccceEEEEEeC
Q 011130 328 KGGIQQGPQIDSEQFEKILKYIRSGVDGGAKLETGGERLG----AKGYYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYK 403 (493)
Q Consensus 328 ~~~~~~gpli~~~~~~~~~~~i~~a~~~ga~v~~gg~~~~----~~g~~~~Ptvl~~~~~~~~i~~~E~fgPvl~v~~~~ 403 (493)
|+++++||+++..+++++.++|++++++|+++++||.... ..|+|++|||+.+++++|++++||+||||++|++|+
T Consensus 320 d~~~~~gpli~~~~~~~v~~~i~~a~~~Ga~~~~gG~~~~~~~~~~g~~~~Ptvl~~v~~~~~i~~eEiFGPvl~v~~~~ 399 (490)
T 2ve5_A 320 DENTNFGPLVSFPHMESVLGYIESGKAQKARLLCGGERVTDGAFGKGAYVAPTVFTDCRDDMTIVREEIFGPVMSILVYD 399 (490)
T ss_dssp STTCCBCCCSCHHHHHHHHHHHHHHHHTTCEEEECCSBCCTTTGGGTTCBCCEEEESCCTTSHHHHSCCCSSEEEEEEES
T ss_pred CCCCccCCCCCHHHHHHHHHHHHHHHHCCCEEEeCCcccccccCCCCceEccEEEecCCCCCccccceeeCCeEEEEEeC
Confidence 9999999999999999999999999999999999997632 368999999999999999999999999999999999
Q ss_pred CHHHHHHHHHcCCCCcEEEEecCCHHHHHHHHHhcceeEEEECCcCCCCCCCCccCCCCCCCCCcchHHHHHhhhhceEE
Q 011130 404 DLDEVIQRSNASQYGLAAGVFTHNLDTANTLMRALRVGSVWINCFDVFDAAIPFGGYKQSGQGREKGSYSLSNYLQVKAV 483 (493)
Q Consensus 404 ~~~eai~~~n~~~~gl~a~v~t~d~~~~~~~~~~l~~g~V~VN~~~~~~~~~pfGG~~~SG~G~~~g~~~l~~~~~~k~v 483 (493)
|+||||+++|+++|||+++|||+|.++++++++++++|+|+||+++...+.+||||+|+||+|+++|.+++++|++.|+|
T Consensus 400 ~~deAi~~aN~~~~gL~a~v~t~d~~~a~~~~~~l~aG~v~vN~~~~~~~~~pfGG~k~SG~G~~~G~~~~~~f~~~k~v 479 (490)
T 2ve5_A 400 DEDEAIRRANDTEYGLAAGVVTQDLARAHRAIHRLEAGICWINTWGESPAEMPVGGYKQSGVGRENGLTTLAHYTRIKSV 479 (490)
T ss_dssp CHHHHHHHHHCSSCCSEEEEECSBHHHHHHHHHHSCCSEEEESCCSCCCTTSCBCCSGGGEESCBSHHHHHHTTEEEEEE
T ss_pred CHHHHHHHHhCCCCCceEEEEcCCHHHHHHHHHhCCcceEEECCCCCCCCCCCcCCCCCCCCCCcchHHHHHHhheeEEE
Confidence 99999999999999999999999999999999999999999999887889999999999999999999999999999999
Q ss_pred EEeCC
Q 011130 484 VTALK 488 (493)
Q Consensus 484 ~~~~~ 488 (493)
++++.
T Consensus 480 ~~~~~ 484 (490)
T 2ve5_A 480 QVELG 484 (490)
T ss_dssp EEECS
T ss_pred EEccC
Confidence 98863
No 20
>2d4e_A 5-carboxymethyl-2-hydroxymuconate semialdehyde dehydrogenase; HPCC; HET: NAD; 2.10A {Thermus thermophilus}
Probab=100.00 E-value=2e-88 Score=717.60 Aligned_cols=417 Identities=40% Similarity=0.688 Sum_probs=396.7
Q ss_pred ccceeCCEeeeCCCCCeeeeecCCCCCeEEEEecCCHHHHHHHHHHHHHHccCCCCCCCCHHHHHHHHHHHHHHHHHhHH
Q 011130 66 TQLLINGQFVDSASGKTFPTLDPRTGDVITHVAEGEAEDVNRAVSAARKAFDEGPWPRMTAYERSKIILRFADLLERHND 145 (493)
Q Consensus 66 ~~~~I~G~~~~~~~~~~~~v~~P~tg~~i~~v~~~~~~~v~~av~~A~~A~~~~~w~~~~~~~R~~iL~~la~~l~~~~~ 145 (493)
.++||||+|+.+.++++++++||+||+++++++.++.+|+++++++|++||+ .|++++..+|.++|++++++|++|.+
T Consensus 27 ~~~~i~G~~~~~~~~~~~~~~nP~tg~~i~~~~~~~~~dv~~av~~A~~A~~--~w~~~~~~~R~~~L~~~a~~l~~~~~ 104 (515)
T 2d4e_A 27 ALHFIAGEFVPSESGETFPSLDPATNEVLGVAARGGEREVDRAAKAAHEAFQ--RWSRTKAKERKRYLLRIAELIEKHAD 104 (515)
T ss_dssp BCEEETTEEECCTTCCEEEEEETTTTEEEEEEECCCHHHHHHHHHHHHHHHH--HHHHSCHHHHHHHHHHHHHHHHHTHH
T ss_pred cCeeECCEEecCCCCCeEEEECCCCCCEEEEEeCCCHHHHHHHHHHHHHHHH--HhccCCHHHHHHHHHHHHHHHHHHHH
Confidence 4689999999876788999999999999999999999999999999999999 89999999999999999999999999
Q ss_pred HHHHHHHHHcCCChhhhhhccHHHHHHHHHHHHHhhHHhcCccCCC-CCCceeEEEeeeeeeE-----------------
Q 011130 146 EIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADKIQGLTAPA-DGPYHVQTLHEPIGVA----------------- 207 (493)
Q Consensus 146 ela~~~~~e~Gk~~~~a~~~Ev~~~~~~l~~~a~~~~~~~~~~~~~-~~~~~~~~~~~PlGVv----------------- 207 (493)
+|++++++|+|||+.+++ .|+..+++.++|++++++++.+...+. ..+...++.++|+|||
T Consensus 105 ela~~~~~e~Gk~~~ea~-~ev~~~~~~l~~~a~~~~~~~g~~~~~~~~~~~~~~~~~P~GVv~~I~PwN~P~~~~~~~~ 183 (515)
T 2d4e_A 105 ELAVMECLDAGQVLRIVR-AQVARAAENFAFYAEYAEHAMEDRTFPVDRDWLYYTVRVPAGPVGIITPWNAPLMLSTWRI 183 (515)
T ss_dssp HHHHHHHHHHCCCHHHHH-HHHHHHHHHHHHHHTTGGGTTCEEECCBTTTEEEEEEEEECCCEEEECCSSSHHHHHHHHH
T ss_pred HHHHHHHHHhCCCHHHHH-HHHHHHHHHHHHHHHHHHHhcCcccccCCCCceeEEEEecCCceEEECCCCchhhhhhhhh
Confidence 999999999999999998 599999999999999998877765443 3345678899999998
Q ss_pred ------------------------------------eEEEeeeCCccchhhhhhccccccEEEEecCcHHHHHHHHHHhh
Q 011130 208 ------------------------------------GVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLAAK 251 (493)
Q Consensus 208 ------------------------------------gvv~vv~~~~~~~~~~L~~~~~v~~v~fTGs~~~g~~v~~~a~~ 251 (493)
|++|+|+|.+.++++.|+.||+||+|+||||+.+|+.|++.+++
T Consensus 184 ~~ALaaGN~VVlKps~~tp~t~~~l~~l~~eaGlP~gvv~vv~g~~~~~g~~L~~~p~vd~I~FTGS~~~G~~I~~~aa~ 263 (515)
T 2d4e_A 184 APALAFGNTVVLKPAEWSPFTATKLAEILKEADLPPGVFNLVQGFGEEAGAALVAHPLVPLLTLTGETETGKIVMRNAAD 263 (515)
T ss_dssp HHHHHTTCCEEEECCTTSCHHHHHHHHHHHHTTCCTTSEEECCCCTTTHHHHHHHCTTCCEEEEESCHHHHHHHHHHHGG
T ss_pred hHHHHcCCeeeecCCCCcHHHHHHHHHHHHHhCCCcCeEEEEeCCchHHHHHHHhCCCcCEEEEeCcHHHHHHHHHHHhh
Confidence 89999999777889999999999999999999999999999998
Q ss_pred cCCCceeEecCCCCceEEccCCCHHHHHHHHHHHHHhhcCCcccCCCeeEecchhHHHHHHHHHHHHhhcccCCCCCCCC
Q 011130 252 SNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMKRVVGDPFKGGI 331 (493)
Q Consensus 252 ~~~~pv~lelgG~~p~iV~~daDl~~aa~~i~~~~~~~~GQ~C~a~~~v~V~~~i~d~f~~~l~~~~~~~~vg~p~~~~~ 331 (493)
++||+++|||||||+||++|||++.|++.+++++|.|+||.|++++|||||++++|+|+++|+++++++++|+|.++++
T Consensus 264 -~l~~v~lELGGk~p~iV~~dADl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~~g~p~~~~~ 342 (515)
T 2d4e_A 264 -HLKRLSPELGGKSPALVFADADLERALDAVVFQIFSFNGERCTASSRLLVEEKIFEDFVGKVVERARAIRVGHPLDPET 342 (515)
T ss_dssp -GTCEEEEECCCCCEEEECTTSCHHHHHHHHHHHHHGGGGCSTTCCCEEEEEHHHHHHHHHHHHHHHHHCCBCCTTSTTC
T ss_pred -cCCceEecCCCcCeEEEcCCCCHHHHHHHHHHHHHhcCCCCCCCCeEEEEehhHHHHHHHHHHHHHhhcccCCcccccC
Confidence 8999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ccccCCCHHHHHHHHHHHHHHHhCCCEEEeCCcccC--------CCCceeeceEEecCCCCccccccccccceEEEEEeC
Q 011130 332 QQGPQIDSEQFEKILKYIRSGVDGGAKLETGGERLG--------AKGYYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYK 403 (493)
Q Consensus 332 ~~gpli~~~~~~~~~~~i~~a~~~ga~v~~gg~~~~--------~~g~~~~Ptvl~~~~~~~~i~~~E~fgPvl~v~~~~ 403 (493)
++||++++.+++++.++|++++++|+++++||.... ..|+|++|||+.+ +++|++++||+||||++|++|+
T Consensus 343 ~~gpli~~~~~~rv~~~i~~a~~~Ga~~~~gG~~~~~~~~~~~~~~g~~~~PTvl~~-~~~~~i~~eEiFGPVl~v~~~~ 421 (515)
T 2d4e_A 343 EVGPLIHPEHLQRVLGYVEAGKREGARLLVGGERAKTSFRGEDLSRGNYLLPTVFVG-ENHMKIAQEEIFGPVLVAIPFK 421 (515)
T ss_dssp SBCCCSCHHHHHHHHHHHHHHHHTTCEEEECCSBCCBCTTSCBCTTTTCBCCEEEEC-CTTSHHHHSCCCSSEEEEEEES
T ss_pred ccCCCcCHHHHHHHHHHHHHHHHCCCEEEeCCccccccccccccCCCceeCCEEEeC-CCCChhhhccccCCceEEEeeC
Confidence 999999999999999999999999999999997643 2699999999999 9999999999999999999999
Q ss_pred CHHHHHHHHHcCCCCcEEEEecCCHHHHHHHHHhcceeEEEECCcCCCCCCCCccCCCCCCCCCcchHHHHHhhhhceEE
Q 011130 404 DLDEVIQRSNASQYGLAAGVFTHNLDTANTLMRALRVGSVWINCFDVFDAAIPFGGYKQSGQGREKGSYSLSNYLQVKAV 483 (493)
Q Consensus 404 ~~~eai~~~n~~~~gl~a~v~t~d~~~~~~~~~~l~~g~V~VN~~~~~~~~~pfGG~~~SG~G~~~g~~~l~~~~~~k~v 483 (493)
|+||||+++|+++|||+++|||+|.++++++++++++|+|+||+++...+.+||||+|+||+|+++|.+++++|++.|+|
T Consensus 422 ~~deAi~~aN~~~~gL~a~v~t~d~~~a~~~~~~l~aG~V~vN~~~~~~~~~PfGG~k~SG~Gr~~G~~gl~~~~~~K~v 501 (515)
T 2d4e_A 422 DEEEALRKANDTKYGLAAYVFTRDLERAHRLALELEAGMVYLNSHNVRHLPTPFGGVKGSGDRREGGTYALDFYTDLKTI 501 (515)
T ss_dssp SHHHHHHHHHCSSCCSEEEEECSBHHHHHHHHHHSCSSEEEESSSCCCCTTSCBCCSGGGBCSCBSHHHHHHHHEEEEEE
T ss_pred CHHHHHHHHhcCCCCceEEEECCCHHHHHHHHHhCCeeEEEECCCCCCCCCCCCCCcCCCCCCccchHHHHHHhCceeEE
Confidence 99999999999999999999999999999999999999999999877788999999999999999999999999999999
Q ss_pred EEeC
Q 011130 484 VTAL 487 (493)
Q Consensus 484 ~~~~ 487 (493)
++.+
T Consensus 502 ~~~~ 505 (515)
T 2d4e_A 502 ALPL 505 (515)
T ss_dssp EEES
T ss_pred EEcC
Confidence 9875
No 21
>3prl_A NADP-dependent glyceraldehyde-3-phosphate dehydro; structural genomics, protein structure initiative, dehydroge PSI-biology; 2.00A {Bacillus halodurans} PDB: 3rhh_A*
Probab=100.00 E-value=1.4e-88 Score=716.70 Aligned_cols=415 Identities=34% Similarity=0.494 Sum_probs=392.2
Q ss_pred cccceeCCEeeeCCCCCeeeeecCCCCCeEEEEecCCHHHHHHHHHHHHHHccCCCCCCCCHHHHHHHHHHHHHHHHHhH
Q 011130 65 YTQLLINGQFVDSASGKTFPTLDPRTGDVITHVAEGEAEDVNRAVSAARKAFDEGPWPRMTAYERSKIILRFADLLERHN 144 (493)
Q Consensus 65 ~~~~~I~G~~~~~~~~~~~~v~~P~tg~~i~~v~~~~~~~v~~av~~A~~A~~~~~w~~~~~~~R~~iL~~la~~l~~~~ 144 (493)
..++||||+|+.+.++++++++||+||+++++++.++.+|+++|+++|++||+ .|+.++..+|.++|++++++|+++.
T Consensus 11 ~~~~~I~G~~~~~~~~~~~~v~nP~tg~~i~~~~~~~~~dv~~av~aA~~A~~--~w~~~~~~~R~~~L~~~a~~l~~~~ 88 (505)
T 3prl_A 11 NANILRNGEWVESRTGERISISAPASGVALGSIPALSQEEVNDAIQGAKDAQK--IWKIRPIHERVDLLYAWADLLEERK 88 (505)
T ss_dssp ECCEEETTEEECCTTCCEEEEECTTTCCEEEEEECCCHHHHHHHHHHHHHHHH--HHTTSCHHHHHHHHHHHHHHHHHTH
T ss_pred ccCeeECCEEecCCCCCEEEEECCCCCCEEEEEcCCCHHHHHHHHHHHHHHHH--HhccCCHHHHHHHHHHHHHHHHHHH
Confidence 35789999999887789999999999999999999999999999999999999 9999999999999999999999999
Q ss_pred HHHHHHHHHHcCCChhhhhhccHHHHHHHHHHHHHhhHHhcCccCCCC--C----CceeEEEeeeeeeE-----------
Q 011130 145 DEIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADKIQGLTAPAD--G----PYHVQTLHEPIGVA----------- 207 (493)
Q Consensus 145 ~ela~~~~~e~Gk~~~~a~~~Ev~~~~~~l~~~a~~~~~~~~~~~~~~--~----~~~~~~~~~PlGVv----------- 207 (493)
++|++++++|+|||..+++. |+..+++.++|++++++++.+...+.. . +...++.++|+|||
T Consensus 89 ~ela~~~~~e~Gk~~~ea~~-Ev~~~~~~~~~~a~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~P~GVV~~I~PwN~P~~ 167 (505)
T 3prl_A 89 EIIGELIMHEVAKPKKSAIG-EVSRTADIIRHTADEALRLNGETLKGDQFKGGSSKKIALVEREPLGVVLAISPFNYPVN 167 (505)
T ss_dssp HHHHHHHHHHHTCCHHHHHH-HHHHHHHHHHHHHHHHHTCCEEEEEGGGSTTTCSSEEEEEEEEECSEEEEEECSSSTTH
T ss_pred HHHHHHHHHHhCCCHHHHHH-HHHHHHHHHHHHHHHHHHhcCccccccccccccCCceeEEEEcCCcEEEEECCCccHHH
Confidence 99999999999999999986 999999999999999888766543322 1 45678899999999
Q ss_pred ------------------------------------------eEEEeeeCCccchhhhhhccccccEEEEecCcHHHHHH
Q 011130 208 ------------------------------------------GVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIV 245 (493)
Q Consensus 208 ------------------------------------------gvv~vv~~~~~~~~~~L~~~~~v~~v~fTGs~~~g~~v 245 (493)
|++|+|++.+.++++.|+.||+||+|+||||+.+|+.|
T Consensus 168 ~~~~~~a~ALaaGN~VVlKpse~tp~ta~~l~~ll~eaGlP~gvv~vv~g~~~~~g~~L~~~p~vd~I~FTGS~~~G~~i 247 (505)
T 3prl_A 168 LAAAKIAPALVTGNTVVFKPATQGSLSGIKMVEALADAGAPEGIIQVVTGRGSVIGDHLVEHPGIDMITFTGGTTTGERI 247 (505)
T ss_dssp HHHHHHHHHHHTTCEEEEEECSTTHHHHHHHHHHHHHTTCCTTSEEECCCCHHHHHHHHHTCTTCCEEEEESCHHHHHHH
T ss_pred HHHHHHHHHHHcCCEEEEECCCCChHHHHHHHHHHHHhCcCcCeEEEEeCCCHHHHHHHHhCCCCCEEEEeCCHHHHHHH
Confidence 89999999878899999999999999999999999999
Q ss_pred HHHHhhcCCCceeEecCCCCceEEccCCCHHHHHHHHHHHHHhhcCCcccCCCeeEecchhHHHHHHHHHHHHhhcccCC
Q 011130 246 LQLAAKSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMKRVVGD 325 (493)
Q Consensus 246 ~~~a~~~~~~pv~lelgG~~p~iV~~daDl~~aa~~i~~~~~~~~GQ~C~a~~~v~V~~~i~d~f~~~l~~~~~~~~vg~ 325 (493)
++.++ +||+++|||||||+||++|||++.|++.+++++|.|+||.|++++|||||++++|+|+++|+++++++++||
T Consensus 248 ~~~aa---l~~v~lELGGk~p~iV~~dADl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~~g~ 324 (505)
T 3prl_A 248 SEKAK---MIPVVLELGGKDPAIVLDDADLKLTASQIVSGAFSYSGQRCTAIKRVFVQDSVADQLVANIKELVEQLTVGS 324 (505)
T ss_dssp HHHCC---SSCEEEECCCCEEEEECTTCCHHHHHHHHHHHHHGGGGCCSSSEEEEEEEHHHHHHHHHHHHHHHHHCCBSC
T ss_pred HHHcc---CCcEEEECCCCCCCccCCCCCHHHHHHHHHHHHHhcCCCccccCceEEEeHHHHHHHHHHHHHHHHhcccCC
Confidence 99876 799999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCCccccCCCHHHHHHHHHHHHHHHhCCCEEEeCCcccCCCCceeeceEEecCCCCccccccccccceEEEEEeCCH
Q 011130 326 PFKGGIQQGPQIDSEQFEKILKYIRSGVDGGAKLETGGERLGAKGYYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYKDL 405 (493)
Q Consensus 326 p~~~~~~~gpli~~~~~~~~~~~i~~a~~~ga~v~~gg~~~~~~g~~~~Ptvl~~~~~~~~i~~~E~fgPvl~v~~~~~~ 405 (493)
|. +++++||+++..+++++.++|++++++|+++++||.. .|+|++|||+.+++++|++++||+||||++|++|+|+
T Consensus 325 p~-~~~~~gpli~~~~~~rv~~~i~~a~~~Ga~v~~gG~~---~g~~~~PTvl~~v~~~~~i~~eEiFGPVl~V~~~~~~ 400 (505)
T 3prl_A 325 PE-DDADITPVIDEKSAAFIQGLIDDALENGATLLSGNKR---QGNLLSPTLLDDVTPAMRVAWEEPFGPVLPIIRVKDA 400 (505)
T ss_dssp TT-TTCSBCCCSCHHHHHHHHHHHHHHHHTTCEEEECCCE---ETTEECCEEEESCCTTSGGGTSCCCSSEEEEEEESSH
T ss_pred CC-CcCcCCcccCHHHHHHHHHHHHHHHHCCCEEEecCCC---CCceeCCeEeecCCCCChhhcCCccCcEEEEEEeCCH
Confidence 99 9999999999999999999999999999999999974 6899999999999999999999999999999999999
Q ss_pred HHHHHHHHcCCCCcEEEEecCCHHHHHHHHHhcceeEEEECCcCC-CCCCCCccCCCCCCCCCcchHHHHHhhhhceEEE
Q 011130 406 DEVIQRSNASQYGLAAGVFTHNLDTANTLMRALRVGSVWINCFDV-FDAAIPFGGYKQSGQGREKGSYSLSNYLQVKAVV 484 (493)
Q Consensus 406 ~eai~~~n~~~~gl~a~v~t~d~~~~~~~~~~l~~g~V~VN~~~~-~~~~~pfGG~~~SG~G~~~g~~~l~~~~~~k~v~ 484 (493)
||||+++|+++|||+++|||+|.+.++++++++++|+|+||+++. ..+.+||||+|+||+|+++|.+++++|++.|+|+
T Consensus 401 deAi~~aN~~~~gL~a~v~t~d~~~a~~~~~~l~aG~V~iN~~~~~~~~~~PFGG~k~SG~Gr~~g~~~~~~f~~~k~v~ 480 (505)
T 3prl_A 401 NEAISLSNQSDYGLQASIFTKDTDRAINIGKHLEVGTVHINAKTERGPDHFPFLGVKKSGLGVQGIKPSLLSMTRERVTV 480 (505)
T ss_dssp HHHHHHHHTSSEESEEEEECSCHHHHHHHHHTSCSSEEEESSCCCSCSTTSCBCCEETTEESCBSHHHHHHHTEEEEEEE
T ss_pred HHHHHHHhCCCCCeEEEEEcCCHHHHHHHHHHCCeeEEEEcCCCCCCCCCCCcCCcCcCCCCcCccHHHHHHhhceEEEE
Confidence 999999999999999999999999999999999999999999866 4588999999999999999999999999999999
Q ss_pred EeCCC
Q 011130 485 TALKN 489 (493)
Q Consensus 485 ~~~~~ 489 (493)
++...
T Consensus 481 ~~~~~ 485 (505)
T 3prl_A 481 LNLAE 485 (505)
T ss_dssp EEC--
T ss_pred EeCCC
Confidence 88643
No 22
>2imp_A Lactaldehyde dehydrogenase; protein-lactate-NADH ternary complex, oxidoreductase; HET: NAI; 2.10A {Escherichia coli} PDB: 2ilu_A* 2hg2_A* 2opx_A*
Probab=100.00 E-value=2.9e-88 Score=712.05 Aligned_cols=418 Identities=32% Similarity=0.565 Sum_probs=395.7
Q ss_pred cccceeCCEeeeCCCCCeeeeecCCCCCeEEEEecCCHHHHHHHHHHHHHHccCCCCCCCCHHHHHHHHHHHHHHHHHhH
Q 011130 65 YTQLLINGQFVDSASGKTFPTLDPRTGDVITHVAEGEAEDVNRAVSAARKAFDEGPWPRMTAYERSKIILRFADLLERHN 144 (493)
Q Consensus 65 ~~~~~I~G~~~~~~~~~~~~v~~P~tg~~i~~v~~~~~~~v~~av~~A~~A~~~~~w~~~~~~~R~~iL~~la~~l~~~~ 144 (493)
+.++||||+|+.+.++++++++||+||+++++++.++.+|+++++++|++||+ .|+++|..+|.++|++++++|++|.
T Consensus 6 ~~~~~i~g~~~~~~~~~~~~v~~P~tg~~~~~~~~~~~~~v~~av~~A~~A~~--~w~~~~~~~R~~~L~~~a~~l~~~~ 83 (479)
T 2imp_A 6 QHPMYIDGQFVTWRGDAWIDVVNPATEAVISRIPDGQAEDARKAIDAAERAQP--EWEALPAIERASWLRKISAGIRERA 83 (479)
T ss_dssp ECCEEETTEEECCCCSCEEEEECTTTCCEEEEEECCCHHHHHHHHHHHHHHHH--HHHHSCHHHHHHHHHHHHHHHHHTH
T ss_pred ccceeECCEEecCCCCCeEEEECCCCCCEEEEEeCCCHHHHHHHHHHHHHHHH--HHhhCCHHHHHHHHHHHHHHHHHHH
Confidence 45789999999876778999999999999999999999999999999999999 9999999999999999999999999
Q ss_pred HHHHHHHHHHcCCChhhhhhccHHHHHHHHHHHHHhhHHhcCccCCCC-CCceeEEEeeeeeeE----------------
Q 011130 145 DEIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADKIQGLTAPAD-GPYHVQTLHEPIGVA---------------- 207 (493)
Q Consensus 145 ~ela~~~~~e~Gk~~~~a~~~Ev~~~~~~l~~~a~~~~~~~~~~~~~~-~~~~~~~~~~PlGVv---------------- 207 (493)
++|++++++|+|||+.++. .|+..+++.++|++++++++.+...+.. .+...++.++|+|||
T Consensus 84 ~ela~~~~~e~Gk~~~ea~-~ev~~~~~~l~~~a~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~PwN~P~~~~~~~ 162 (479)
T 2imp_A 84 SEISALIVEEGGKIQQLAE-VEVAFTADYIDYMAEWARRYEGEIIQSDRPGENILLFKRALGVTTGILPWNFPFFLIARK 162 (479)
T ss_dssp HHHHHHHHHHHCCCHHHHH-HHHHHHHHHHHHHHTTTTTCCCEEECCSSTTEEEEEEEEECSEEEEECCSSSHHHHHHHH
T ss_pred HHHHHHHHHHhCCCHHHHH-HHHHHHHHHHHHHHHHHHHhhCCccccCCCCceeEEEEeccceEEEECCCchHHHHHHHH
Confidence 9999999999999999988 4999999999999998887766654432 244678999999999
Q ss_pred -------------------------------------eEEEeeeCCccchhhhhhccccccEEEEecCcHHHHHHHHHHh
Q 011130 208 -------------------------------------GVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLAA 250 (493)
Q Consensus 208 -------------------------------------gvv~vv~~~~~~~~~~L~~~~~v~~v~fTGs~~~g~~v~~~a~ 250 (493)
|++|+|++.+.++++.|+.||+||+|+||||+.+|+.|++.++
T Consensus 163 ~~~ALaaGN~VVlKps~~tp~t~~~l~~l~~~aGlP~gvv~vv~g~~~~~~~~L~~~~~v~~V~fTGS~~~g~~i~~~aa 242 (479)
T 2imp_A 163 MAPALLTGNTIVIKPSEFTPNNAIAFAKIVDEIGLPRGVFNLVLGRGETVGQELAGNPKVAMVSMTGSVSAGEKIMATAA 242 (479)
T ss_dssp HHHHHHTTCEEEEECCTTSCHHHHHHHHHHHHHTCCTTSEEECCSCTTTHHHHHHHCTTEEEEEEESCHHHHHHHHHHHH
T ss_pred HHHHHHcCCEEEEECCccchHHHHHHHHHHHHhCCCcCeEEEEECCcHHHHHHHHhCCCcCEEEEeCCHHHHHHHHHHHh
Confidence 8999999977788999999999999999999999999999999
Q ss_pred hcCCCceeEecCCCCceEEccCCCHHHHHHHHHHHHHhhcCCcccCCCeeEecchhHHHHHHHHHHHHhhcccCCCCC-C
Q 011130 251 KSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMKRVVGDPFK-G 329 (493)
Q Consensus 251 ~~~~~pv~lelgG~~p~iV~~daDl~~aa~~i~~~~~~~~GQ~C~a~~~v~V~~~i~d~f~~~l~~~~~~~~vg~p~~-~ 329 (493)
+ ++||+++|||||||+||++|||++.|++.+++++|.|+||.|+++++||||++++|+|+++|+++++++++|||.| +
T Consensus 243 ~-~~~~v~lElGGk~p~iV~~dADl~~aa~~i~~~~~~n~GQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~~~~g~p~~~~ 321 (479)
T 2imp_A 243 K-NITKVCLELGGKAPAIVMDDADLELAVKAIVDSRVINSGQVCNCAERVYVQKGIYDQFVNRLGEAMQAVQFGNPAERN 321 (479)
T ss_dssp T-TTCEEEEECCCCCEEEECTTSCHHHHHHHHHTTSSTTTTCCSSSCSEEEEEGGGHHHHHHHHHHHHHTCCBSCTTTCS
T ss_pred c-cCCcEEEEcCCcCeEEECCCCCHHHHHHHHHHHHhhcCCCcCcCCcEEEEehhhHHHHHHHHHHHHHhcccCCccccC
Confidence 8 8999999999999999999999999999999999999999999999999999999999999999999999999999 9
Q ss_pred CCccccCCCHHHHHHHHHHHHHHHhCCCEEEeCCcccCCCCceeeceEEecCCCCccccccccccceEEEEEeCCHHHHH
Q 011130 330 GIQQGPQIDSEQFEKILKYIRSGVDGGAKLETGGERLGAKGYYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYKDLDEVI 409 (493)
Q Consensus 330 ~~~~gpli~~~~~~~~~~~i~~a~~~ga~v~~gg~~~~~~g~~~~Ptvl~~~~~~~~i~~~E~fgPvl~v~~~~~~~eai 409 (493)
++++||++++.+++++.++|++++++|+++++||...+..|+|++|||+.+++++|++++||+||||++|++|+|+||||
T Consensus 322 ~~~~gpli~~~~~~rv~~~i~~a~~~Ga~~~~gG~~~~~~g~~~~Ptvl~~v~~~~~~~~eEiFGPVl~v~~~~~~~eAi 401 (479)
T 2imp_A 322 DIAMGPLINAAALERVEQKVARAVEEGARVAFGGKAVEGKGYYYPPTLLLDVRQEMSIMHEETFGPVLPVVAFDTLEDAI 401 (479)
T ss_dssp SCSBCCCSSHHHHHHHHHHHHHHHHTTCEEEECCCCCCSSSCCCCCEEEESCCTTSGGGGSCCCSSEEEEEEESSHHHHH
T ss_pred CCccCCCcCHHHHHHHHHHHHHHHHCCCEEEECCcccCCCCceECCEEEeCCCCCCHHHhCccCCceEEEEeeCCHHHHH
Confidence 99999999999999999999999999999999997643468999999999999999999999999999999999999999
Q ss_pred HHHHcCCCCcEEEEecCCHHHHHHHHHhcceeEEEECCcCCCCCCCCccCCCCCCCCCcchHHHHHhhhhceEEEEe
Q 011130 410 QRSNASQYGLAAGVFTHNLDTANTLMRALRVGSVWINCFDVFDAAIPFGGYKQSGQGREKGSYSLSNYLQVKAVVTA 486 (493)
Q Consensus 410 ~~~n~~~~gl~a~v~t~d~~~~~~~~~~l~~g~V~VN~~~~~~~~~pfGG~~~SG~G~~~g~~~l~~~~~~k~v~~~ 486 (493)
+++|+++|||+++|||+|.+.++++++++++|+|+||++....+.+||||+|+||+|+++|.+++++|++.|+|++.
T Consensus 402 ~~aN~~~~gL~a~v~t~d~~~~~~~~~~l~~G~v~iN~~~~~~~~~PfGG~k~SG~G~~~g~~~l~~~~~~k~v~~~ 478 (479)
T 2imp_A 402 SMANDSDYGLTSSIYTQNLNVAMKAIKGLKFGETYINRENFEAMQGFHAGWRKSGIGGADGKHGLHEYLQTQVVYLQ 478 (479)
T ss_dssp HHHHCSSEESEEEEECCCHHHHHHHHHHCCSSEEEESSCCCCCTTSCBCCEETTEESCBSHHHHHHTTEEEEEEEEE
T ss_pred HHHhcCCCCeeEEEECCCHHHHHHHHHhCCEeEEEECCCCCCCCCCCCCCCCCCCCCCCchHHHHHHhcCeeEEEec
Confidence 99999999999999999999999999999999999999877778999999999999999999999999999999764
No 23
>3qan_A 1-pyrroline-5-carboxylate dehydrogenase 1; proline oxidation, redox control, apoptosis, NAD binding, oxidoreductase, PSI-biology; 1.95A {Bacillus halodurans} PDB: 3rjl_A
Probab=100.00 E-value=4.5e-88 Score=717.26 Aligned_cols=416 Identities=32% Similarity=0.546 Sum_probs=396.2
Q ss_pred cccceeCCEeeeCCCCCeeeeecCCC-CCeEEEEecCCHHHHHHHHHHHHHHccCCCCCCCCHHHHHHHHHHHHHHHHHh
Q 011130 65 YTQLLINGQFVDSASGKTFPTLDPRT-GDVITHVAEGEAEDVNRAVSAARKAFDEGPWPRMTAYERSKIILRFADLLERH 143 (493)
Q Consensus 65 ~~~~~I~G~~~~~~~~~~~~v~~P~t-g~~i~~v~~~~~~~v~~av~~A~~A~~~~~w~~~~~~~R~~iL~~la~~l~~~ 143 (493)
.+++||||+|+. ++++++++||+| |+++++++.++.+|+++|+++|++||+ .|+.++..+|.++|++++++|+++
T Consensus 37 ~~~~~I~G~~~~--~~~~~~~~nP~t~~~~i~~~~~~~~~dv~~av~aA~~A~~--~w~~~~~~~R~~~L~~~a~~l~~~ 112 (538)
T 3qan_A 37 EYPLIINGERVT--TEDKIQSWNPARKDQLVGSVSKANQDLAEKAIQSADEAFQ--TWRNVNPEERANILVKAAAIIRRR 112 (538)
T ss_dssp EECEEETTEEEC--CSSEEEEECSSSTTCEEEEEECBCHHHHHHHHHHHHHHHH--HHTTSCHHHHHHHHHHHHHHHHHT
T ss_pred ccceeECCEEec--CCCeEEEECCCCCCcEEEEEcCCCHHHHHHHHHHHHHHHH--hhccCCHHHHHHHHHHHHHHHHHH
Confidence 468999999997 778999999999 999999999999999999999999999 999999999999999999999999
Q ss_pred HHHHHHHHHHHcCCChhhhhhccHHHHHHHHHHHHHh-hHHhcCccCCCCCCceeEEEeeeeeeE---------------
Q 011130 144 NDEIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGW-ADKIQGLTAPADGPYHVQTLHEPIGVA--------------- 207 (493)
Q Consensus 144 ~~ela~~~~~e~Gk~~~~a~~~Ev~~~~~~l~~~a~~-~~~~~~~~~~~~~~~~~~~~~~PlGVv--------------- 207 (493)
.++|++++++|+|||+.++.. |+..+++.++|++++ .+...+...+...+...++.++|+|||
T Consensus 113 ~~ela~~~~~e~Gk~~~ea~~-Ev~~~~~~l~~~a~~~~~~~~~~~~~~~~~~~~~~~~~P~GVV~~I~PwN~P~~~~~~ 191 (538)
T 3qan_A 113 KHEFSAWLVHEAGKPWKEADA-DTAEAIDFLEYYARQMIELNRGKEILSRPGEQNRYFYTPMGVTVTISPWNFALAIMVG 191 (538)
T ss_dssp HHHHHHHHHHHTCCCHHHHHH-HHHHHHHHHHHHHHHHHHHHTCBCCCCCTTEEEEEEEEECCEEEEECCSTTTTHHHHH
T ss_pred HHHHHHHHHHHhCCCHHHHHH-HHHHHHHHHHHHHHHHHHhcCCeeecccCCcceeeecCCCcEEEEECCCchHHHHHHH
Confidence 999999999999999999986 999999999999998 666777666554567789999999999
Q ss_pred --------------------------------------eEEEeeeCCccchhhhhhccccccEEEEecCcHHHHHHHHHH
Q 011130 208 --------------------------------------GVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLA 249 (493)
Q Consensus 208 --------------------------------------gvv~vv~~~~~~~~~~L~~~~~v~~v~fTGs~~~g~~v~~~a 249 (493)
|++|+|+|.+.++++.|+.||+||+|+||||+.+|+.|++.+
T Consensus 192 ~~a~ALaaGN~VVlKps~~tp~ta~~l~~l~~eaGlP~gvv~vv~g~~~~~g~~L~~~p~v~~I~FTGS~~~G~~i~~~a 271 (538)
T 3qan_A 192 TAVAPIVTGNTVVLKPASTTPVVAAKFVEVLEDAGLPKGVINYVPGSGAEVGDYLVDHPKTSLITFTGSKDVGVRLYERA 271 (538)
T ss_dssp HHHHHHHTTCEEEEECCTTSHHHHHHHHHHHHHTTCCTTSEEECCBCTTTTHHHHHHCTTEEEEEEESCHHHHHHHHHHH
T ss_pred HHHHHHHcCCEEEEECCCccHHHHHHHHHHHHHhCCCCCeEEEEecCCHHHHHHHHhCCCcCEEEEECCHHHHHHHHHHh
Confidence 899999998888999999999999999999999999999999
Q ss_pred hhcC------CCceeEecCCCCceEEccCCCHHHHHHHHHHHHHhhcCCcccCCCeeEecchhHHHHHHHHHHHHhhccc
Q 011130 250 AKSN------LKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMKRVV 323 (493)
Q Consensus 250 ~~~~------~~pv~lelgG~~p~iV~~daDl~~aa~~i~~~~~~~~GQ~C~a~~~v~V~~~i~d~f~~~l~~~~~~~~v 323 (493)
+. + +||+++|||||||+||++|||+|.|++.+++++|.|+||.|++++|||||++++|+|+++|+++++++++
T Consensus 272 a~-~~~~~~~lkpv~lELGGk~p~IV~~dADl~~Aa~~i~~~~f~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~v 350 (538)
T 3qan_A 272 AV-VRPGQNHLKRVIVEMGGKDTVVVDRDADLDLAAESILVSAFGFSGQKCSAGSRAVIHKDVYDEVLEKTVALAKNLTV 350 (538)
T ss_dssp TS-CCTTCCSCCEEEEECCCCCEEEECTTSCHHHHHHHHHHHHHGGGGCSTTCCCEEEEETTTHHHHHHHHHHHHTTCCB
T ss_pred hh-ccccccccccEEEecCCCCceEECCCCCHHHHHHHHHHHHHhcCCCCCccCceeEEehHHHHHHHHHHHHHHHhccC
Confidence 87 6 9999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCCCCccccCCCHHHHHHHHHHHHHHHhCCCEEEeCCcccCCCCceeeceEEecCCCCccccccccccceEEEEEeC
Q 011130 324 GDPFKGGIQQGPQIDSEQFEKILKYIRSGVDGGAKLETGGERLGAKGYYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYK 403 (493)
Q Consensus 324 g~p~~~~~~~gpli~~~~~~~~~~~i~~a~~~ga~v~~gg~~~~~~g~~~~Ptvl~~~~~~~~i~~~E~fgPvl~v~~~~ 403 (493)
|||.|+++++||+++..+++++.++|++++++| ++++||...+..|+|++|||+.+++++|++++||+||||++|++|+
T Consensus 351 G~p~~~~~~~Gpli~~~~~~rv~~~i~~a~~~G-~~~~gG~~~~~~g~~~~PTvl~~v~~~~~i~~eEiFGPVl~V~~~~ 429 (538)
T 3qan_A 351 GDPTNRDNYMGPVIDEKAFEKIMSYIEIGKKEG-RLMTGGEGDSSTGFFIQPTIIADLDPEAVIMQEEIFGPVVAFSKAN 429 (538)
T ss_dssp SCTTSTTCSBCCCSCHHHHHHHHHHHHHHHHHS-EEEECCCEECSSSCEECCEEEESCCTTSHHHHSCCCSSEEEEEEES
T ss_pred CCCCCCCCCCcCccCHHHHHHHHHHHHHHHHCC-eEEeCCCcCCCCCceeCCeeeecCCCCChhhCCCcCCcEEEEEEeC
Confidence 999999999999999999999999999999999 9999998754479999999999999999999999999999999999
Q ss_pred CHHHHHHHHHcCCCCcEEEEecCCHHHHHHHHHhcceeEEEEC-CcCCC-CCCCCccCCCCCCCC-CcchHHHHHhhhhc
Q 011130 404 DLDEVIQRSNASQYGLAAGVFTHNLDTANTLMRALRVGSVWIN-CFDVF-DAAIPFGGYKQSGQG-REKGSYSLSNYLQV 480 (493)
Q Consensus 404 ~~~eai~~~n~~~~gl~a~v~t~d~~~~~~~~~~l~~g~V~VN-~~~~~-~~~~pfGG~~~SG~G-~~~g~~~l~~~~~~ 480 (493)
|+||||+++|+++|||+++|||+|.+.++++++++++|+|||| ++... .+.+||||+|+||+| +++|.++|++|++.
T Consensus 430 ~~deAi~~aN~~~~gLaa~v~t~d~~~a~~~~~~l~aG~V~iN~~~~~~~~~~~PfGG~k~SG~G~~~~G~~gl~~ft~~ 509 (538)
T 3qan_A 430 DFDHALEIANNTEYGLTGAVITRNRAHIEQAKREFHVGNLYFNRNCTGAIVGYHPFGGFKMSGTDSKAGGPDYLALHMQA 509 (538)
T ss_dssp SHHHHHHHHHCSSEESEEEEECSCHHHHHHHHHHCCCSEEEESSCSCCCCTTTSCBCCEETTBSCCCBTSTTTGGGGEEE
T ss_pred CHHHHHHHHhcCCCCcEEEEECCCHHHHHHHHHhCCeeEEEEeCCCCCCCCCCCCcCCcCcCCCCcccccHHHHHHhhCe
Confidence 9999999999999999999999999999999999999999999 55554 789999999999999 99999999999999
Q ss_pred eEEEEeC
Q 011130 481 KAVVTAL 487 (493)
Q Consensus 481 k~v~~~~ 487 (493)
|+|+++.
T Consensus 510 k~v~~~~ 516 (538)
T 3qan_A 510 KTVSEMY 516 (538)
T ss_dssp EEEEEEC
T ss_pred EEEEEec
Confidence 9998875
No 24
>4e4g_A Methylmalonate-semialdehyde dehydrogenase; structural genomics, protein structure INI nysgrc, PSI-biology; 2.90A {Sinorhizobium meliloti}
Probab=100.00 E-value=2.8e-88 Score=716.27 Aligned_cols=422 Identities=25% Similarity=0.398 Sum_probs=396.3
Q ss_pred CccccceeCCEeeeCCCCCeeeeecCCCCCeEEEEecCCHHHHHHHHHHHHHHccCCCCCCCCHHHHHHHHHHHHHHHHH
Q 011130 63 VDYTQLLINGQFVDSASGKTFPTLDPRTGDVITHVAEGEAEDVNRAVSAARKAFDEGPWPRMTAYERSKIILRFADLLER 142 (493)
Q Consensus 63 ~~~~~~~I~G~~~~~~~~~~~~v~~P~tg~~i~~v~~~~~~~v~~av~~A~~A~~~~~w~~~~~~~R~~iL~~la~~l~~ 142 (493)
+...++||||+|+.+.++++++++||+||+++++++.++.+|+++|+++|++||+ .|+.++..+|.++|++++++|++
T Consensus 24 m~~~~~~I~G~~~~~~~~~~~~v~nP~tg~~i~~~~~~~~~dv~~av~~A~~A~~--~w~~~~~~~R~~~L~~~a~~l~~ 101 (521)
T 4e4g_A 24 MYELGHFIDGKRVAGTSGRVSNIFNPATGEVQGTVALASDADLAAAVESAKAAQP--KWAATNPQRRARVFMKFVQLLND 101 (521)
T ss_dssp CEEECEEETTEEECCSSSCEEEEEETTTTEEEEEEECCCHHHHHHHHHHHHHHHH--HHHTSCHHHHHHHHHHHHHHHHH
T ss_pred hhccCeeECCEEecCCCCCEEEEECCCCCCEEEEEcCCCHHHHHHHHHHHHHHHH--HhccCCHHHHHHHHHHHHHHHHH
Confidence 4567899999999887789999999999999999999999999999999999999 99999999999999999999999
Q ss_pred hHHHHHHHHHHHcCCChhhhhhccHHHHHHHHHHHHHhhHHhcCccCCC-CCCceeEEEeeeeeeE--------------
Q 011130 143 HNDEIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADKIQGLTAPA-DGPYHVQTLHEPIGVA-------------- 207 (493)
Q Consensus 143 ~~~ela~~~~~e~Gk~~~~a~~~Ev~~~~~~l~~~a~~~~~~~~~~~~~-~~~~~~~~~~~PlGVv-------------- 207 (493)
+.++|++++++|+|||+.+++. |+..+++.++|++++.+.+.+...+. ..+...++.++|+|||
T Consensus 102 ~~~ela~~~~~e~Gk~~~ea~~-Ev~~~~~~l~~~a~~~~~~~~~~~~~~~~~~~~~~~~~P~GVV~~I~PwN~P~~~~~ 180 (521)
T 4e4g_A 102 NMNELAEMLSREHGKTIDDAKG-DIVRGLEVCEFVIGIPHLQKSEFTEGAGPGIDMYSIRQPVGIGAGITPFNFPGMIPM 180 (521)
T ss_dssp HHHHHHHHHHHHHCSCHHHHHH-HHHHHHHHHHHHHTHHHHTCEEEEEEEETTEEEEEEEEECCEEEEECCSSCTTHHHH
T ss_pred HHHHHHHHHHHHhCCCHHHHHH-HHHHHHHHHHHHHHHHHHhcCcccccCCCCcceeEEEcCCcEEEEECCCcchHHHHH
Confidence 9999999999999999999985 99999999999999887776654332 2345678999999998
Q ss_pred ---------------------------------------eEEEeeeCCccchhhhhhccccccEEEEecCcHHHHHHHHH
Q 011130 208 ---------------------------------------GVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQL 248 (493)
Q Consensus 208 ---------------------------------------gvv~vv~~~~~~~~~~L~~~~~v~~v~fTGs~~~g~~v~~~ 248 (493)
|++|+|++. .+.++.|+.||+||+|+||||+.+|+.|++.
T Consensus 181 ~~~a~ALaaGN~VVlKpse~tp~t~~~l~~l~~eaGlP~gvv~vv~g~-~~~~~~L~~~p~vd~I~FTGS~~vG~~i~~~ 259 (521)
T 4e4g_A 181 WMFAPAIACGNAFILKPSERDPSVPIRLAELMIEAGLPAGILNVVNGD-KGAVDAILTHPDIAAVSFVGSTPIARYVYGT 259 (521)
T ss_dssp HHHHHHHHTTCEEEEECCTTSTHHHHHHHHHHHHTTCCTTSEEECCCC-HHHHHHHHTCTTCCEEEEESCHHHHHHHHHH
T ss_pred HHHHHHHHcCCEEEEECCCcchHHHHHHHHHHHHhCCCcCeEEEEeCC-hHHHHHHHhCCCcCEEEEECCHHHHHHHHHH
Confidence 899999994 5567899999999999999999999999999
Q ss_pred HhhcCCCceeEecCCCCceEEccCCCHHHHHHHHHHHHHhhcCCcccCCCeeEecch-hHHHHHHHHHHHHhhcccCCCC
Q 011130 249 AAKSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHES-VYDQFVEKANALAMKRVVGDPF 327 (493)
Q Consensus 249 a~~~~~~pv~lelgG~~p~iV~~daDl~~aa~~i~~~~~~~~GQ~C~a~~~v~V~~~-i~d~f~~~l~~~~~~~~vg~p~ 327 (493)
+++ ++||+++|||||||+||++|||++.|++.+++++|.|+||.|++++|||||++ ++|+|+++|+++++++++|+|.
T Consensus 260 aa~-~lkpv~lELGGk~p~IV~~dADl~~Aa~~i~~~~f~n~GQ~C~a~~rvlV~~~~i~d~f~~~l~~~~~~~~vG~~~ 338 (521)
T 4e4g_A 260 AAM-NGKRAQCFGGAKNHMIIMPDADLDQAANALIGAGYGSAGERCMAISVAVPVGEETANRLIDKLVPMVESLRIGPYT 338 (521)
T ss_dssp HHH-TTCEEEEECCCCEEEEECTTSCHHHHHHHHHHHHHGGGGCCTTSEEEEEEBSHHHHHHHHHHHHHHHHTCCBCCTT
T ss_pred Hhh-cCCCeeecCCCCCeEEEcCCCCHHHHHHHHHHHHHhCCCCCcccCeEEEEeCchHHHHHHHHHHHHHHhccCCCCC
Confidence 998 89999999999999999999999999999999999999999999999999999 9999999999999999999999
Q ss_pred CCCCccccCCCHHHHHHHHHHHHHHHhCCCEEEeCCccc----CCCCceeeceEEecCCCCccccccccccceEEEEEeC
Q 011130 328 KGGIQQGPQIDSEQFEKILKYIRSGVDGGAKLETGGERL----GAKGYYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYK 403 (493)
Q Consensus 328 ~~~~~~gpli~~~~~~~~~~~i~~a~~~ga~v~~gg~~~----~~~g~~~~Ptvl~~~~~~~~i~~~E~fgPvl~v~~~~ 403 (493)
++++++||+++..+++++.++|++++++|+++++||... ...|+|++|||+.+++++|++++||+||||++|++|+
T Consensus 339 ~~~~~~gpli~~~~~~rv~~~i~~a~~~Ga~v~~gG~~~~~~~~~~g~~~~PTvl~~v~~~~~i~~eEiFGPVl~v~~~~ 418 (521)
T 4e4g_A 339 DEKADMGPVVTKEAEQRIRSLIDSGIEQGAKLVVDGRDFKLQGYENGHFIGGCLFDDVTPDMDIYKTEIFGPVLSVVRAR 418 (521)
T ss_dssp CTTCSBCCCSCHHHHHHHHHHHHHHHHHTCEEEECCSSCCCTTCTTSCCCCCEEEESCCTTSHHHHSCCCSSEEEECCBS
T ss_pred CccCccCCCCCHHHHHHHHHHHHHHHHCCCEEEecCcccCCCcCCCCcEECCEEEEcCCCCCHhhcCcccCcEEEEEEeC
Confidence 999999999999999999999999999999999999753 2479999999999999999999999999999999999
Q ss_pred CHHHHHHHHHcCCCCcEEEEecCCHHHHHHHHHhcceeEEEECCcCCC-CCCCCccCCCCCCCC--CcchHHHHHhhhhc
Q 011130 404 DLDEVIQRSNASQYGLAAGVFTHNLDTANTLMRALRVGSVWINCFDVF-DAAIPFGGYKQSGQG--REKGSYSLSNYLQV 480 (493)
Q Consensus 404 ~~~eai~~~n~~~~gl~a~v~t~d~~~~~~~~~~l~~g~V~VN~~~~~-~~~~pfGG~~~SG~G--~~~g~~~l~~~~~~ 480 (493)
|+||||+++|+++|||+++|||+|.+.++++++++++|+||||++..+ .+.+||||+|+||+| +++|++++++|++.
T Consensus 419 ~~deAi~~aN~~~~gLaa~v~t~d~~~a~~~~~~l~aG~V~vN~~~~~~~~~~PfGG~k~SG~G~~~~~G~~gl~~ft~~ 498 (521)
T 4e4g_A 419 NYEEALSLPMKHEYGNGVAIYTRDGDAARDFASRINIGMVGVNVPIPVPLAYHSFGGWKSSSFGDLNQHGTDSIKFWTRT 498 (521)
T ss_dssp SHHHHHHHHHHSSEESEEEEECSBHHHHHHHHHHCCCSEEEESCSSCCCCTTSCBCCEETTEESSCCBSHHHHHHHTEEE
T ss_pred CHHHHHHHHhcCCCCeEEEEECCCHHHHHHHHHhCCeeeEEECCCCCCCCCCCCcCCcccCCCCCCccchHHHHHHhheE
Confidence 999999999999999999999999999999999999999999997654 478999999999999 79999999999999
Q ss_pred eEEEEeCCC
Q 011130 481 KAVVTALKN 489 (493)
Q Consensus 481 k~v~~~~~~ 489 (493)
|+|+++...
T Consensus 499 K~v~~~~~~ 507 (521)
T 4e4g_A 499 KTITSRWPS 507 (521)
T ss_dssp EEEEECCCC
T ss_pred EEEEEecCc
Confidence 999987643
No 25
>3r64_A NAD dependent benzaldehyde dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.57A {Corynebacterium glutamicum}
Probab=100.00 E-value=3.1e-87 Score=708.00 Aligned_cols=420 Identities=33% Similarity=0.519 Sum_probs=380.6
Q ss_pred CCCccccceeCCEeeeCCCCCeeeeecCCCCCeEEEEecCCHHHHHHHHHHHHHHccCCCCCCCCHHHHHHHHHHHHHHH
Q 011130 61 VKVDYTQLLINGQFVDSASGKTFPTLDPRTGDVITHVAEGEAEDVNRAVSAARKAFDEGPWPRMTAYERSKIILRFADLL 140 (493)
Q Consensus 61 ~~~~~~~~~I~G~~~~~~~~~~~~v~~P~tg~~i~~v~~~~~~~v~~av~~A~~A~~~~~w~~~~~~~R~~iL~~la~~l 140 (493)
.++...++||||+|+.+.++++++++||+||+++++++.++.+|+++++++|++||+ .|+.++..+|.++|++++++|
T Consensus 8 ~~~~~~~~~I~G~~~~~~~~~~~~~~~P~tg~~~~~~~~~~~~~v~~av~~A~~A~~--~w~~~~~~~R~~~L~~~a~~l 85 (508)
T 3r64_A 8 AGIDATKHLIGGQWVEGNSDRISTNINPYDDSVIAESKQASIADVDAAYEAAKKAQA--EWAATPAAERSAIIYRAAELL 85 (508)
T ss_dssp TTBCTTSEEETTEEECCCSSCEEEEECTTTCCEEEEEECCCHHHHHHHHHHHHHHHH--HHHHSCHHHHHHHHHHHHHHH
T ss_pred CCccccceeECCEEecCCCCCEEEeECCCCCCEEEEECCCCHHHHHHHHHHHHHHHH--HhCcCCHHHHHHHHHHHHHHH
Confidence 445667899999999887889999999999999999999999999999999999999 999999999999999999999
Q ss_pred HHhHHHHHHHHHHHcCCChhhhhhccHHHHHHHHHHHHHhhHHhcCccCCCC--CCceeEEEeeeeeeE-----------
Q 011130 141 ERHNDEIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADKIQGLTAPAD--GPYHVQTLHEPIGVA----------- 207 (493)
Q Consensus 141 ~~~~~ela~~~~~e~Gk~~~~a~~~Ev~~~~~~l~~~a~~~~~~~~~~~~~~--~~~~~~~~~~PlGVv----------- 207 (493)
+++.++|++++++|+|||..+++. |+..+++.++|++++.+++.+ ..+.. .+...++.++|+|||
T Consensus 86 ~~~~~ela~~~~~e~Gk~~~~a~~-Ev~~~~~~~~~~a~~~~~~~~-~~~~~~~~~~~~~~~~~P~GVv~~I~PwN~P~~ 163 (508)
T 3r64_A 86 EEHREEIVEWLIKESGSTRSKANL-EITLAGNITKESASFPGRVHG-RISPSNTPGKENRVYRVAKGVVGVISPWNFPLN 163 (508)
T ss_dssp HHTHHHHHHHHHHTSCCCHHHHHH-HHHHHHHHHHHHTTSTTTCCE-EEECCSSTTEEEEEEEEECSEEEEECCSSSHHH
T ss_pred HHhHHHHHHHHHHHcCCCHHHHHH-HHHHHHHHHHHHHHHhhhhcC-cccccCCCCceeEEEEecceEEEEECCCcchHH
Confidence 999999999999999999999986 999999999999998877666 44432 346788999999998
Q ss_pred -------------------------------------------eEEEeeeCCccchhhhhhccccccEEEEecCcHHHHH
Q 011130 208 -------------------------------------------GVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKI 244 (493)
Q Consensus 208 -------------------------------------------gvv~vv~~~~~~~~~~L~~~~~v~~v~fTGs~~~g~~ 244 (493)
|++|+|++.+.++++.|+.||+||+|+||||+.+|+.
T Consensus 164 ~~~~~~~~ALaaGN~VVlKps~~tp~t~~~~l~~ll~~aGlP~gvv~vv~g~~~~~g~~L~~~p~vd~I~fTGS~~~g~~ 243 (508)
T 3r64_A 164 LSIRSVAPALAVGNAVVIKPASDTPVTGGVIPARIFEEAGVPAGVISTVAGAGSEIGDHFVTHAVPKLISFTGSTPVGRR 243 (508)
T ss_dssp HHHHHHHHHHHTTCEEEEECCTTCHHHHTHHHHHHHHTTTCCTTTEEECCCCTTTTHHHHHHCSSCSEEEEESCHHHHHH
T ss_pred HHHHHHHHHHhcCCEEEEECCCCChHHHHHHHHHHHHHhCcCcCeEEEEeCCCHHHHHHHhhCCCccEEEEECCHHHHHH
Confidence 8899999987889999999999999999999999999
Q ss_pred HHHHHhhc-CCCceeEecCCCCceEEccCCCHHHHHHHHHHHHHhhcCCcccCCCeeEecchhHHHHHHHHHHHHhhccc
Q 011130 245 VLQLAAKS-NLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMKRVV 323 (493)
Q Consensus 245 v~~~a~~~-~~~pv~lelgG~~p~iV~~daDl~~aa~~i~~~~~~~~GQ~C~a~~~v~V~~~i~d~f~~~l~~~~~~~~v 323 (493)
|++.+++. ++||+++|||||||+||++|||++.|++.++.++|.|+||.|+++++||||++++|+|+++|+++++++++
T Consensus 244 i~~~aa~~~~l~~v~lElGGk~p~iV~~dADl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~~ 323 (508)
T 3r64_A 244 VGELAINGGPMKTVALELGGNAPFVVLADADIDAAAQAAAVGAFLHQGQICMSINRVIVDAAVHDEFLEKFVEAVKNIPT 323 (508)
T ss_dssp HHHHHHSSSSCCEEEEECCCCCEEEECTTSCHHHHHHHHHHHHHTSTTCTTTCCSEEEEEHHHHHHHHHHHHHHHHTCCB
T ss_pred HHHHhhcccCCCceEeecCCcCceEECCCCCHHHHHHHHHHHHHhcCCCCcccCcEEEEehhHHHHHHHHHHHHHHhccC
Confidence 99988641 57999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCCCCccccCCCHHHHHHHHHHHHHHHhCCCEEEeCCcccCCCCceeeceEEecCCCCccccccccccceEEEEEeC
Q 011130 324 GDPFKGGIQQGPQIDSEQFEKILKYIRSGVDGGAKLETGGERLGAKGYYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYK 403 (493)
Q Consensus 324 g~p~~~~~~~gpli~~~~~~~~~~~i~~a~~~ga~v~~gg~~~~~~g~~~~Ptvl~~~~~~~~i~~~E~fgPvl~v~~~~ 403 (493)
|||.++++++||++++.+++++.++|++++++|+++++||.. .|+|++|||+.+++++|++++||+||||++|++|+
T Consensus 324 G~p~~~~~~~gpli~~~~~~~v~~~i~~a~~~Ga~v~~gG~~---~g~~~~Ptvl~~v~~~~~i~~eEiFGPVl~v~~~~ 400 (508)
T 3r64_A 324 GDPSAEGTLVGPVINDSQLSGLKEKIELAKKEGATVQVEGPI---EGRLVHPHVFSDVTSDMEIAREEIFGPLISVLKAD 400 (508)
T ss_dssp SCTTSSSCCBCCCSCHHHHHHHHHHHHHHHTTTCEEEECCCE---ETTEECCEEEEEECTTSGGGTSCCCSSEEEEEEES
T ss_pred CCCccCCCcccCCCCHHHHHHHHHHHHHHHHcCCEEEecCCC---CCcEEecEEEecCCCCChhhcccccCceEEEEEeC
Confidence 999999999999999999999999999999999999999975 68999999999999999999999999999999999
Q ss_pred CHHHHHHHHHcCCCCcEEEEecCCHHHHHHHHHhcceeEEEECCcCCC-CCCCCccCCCCCCCCCcchHHHHHhhhhceE
Q 011130 404 DLDEVIQRSNASQYGLAAGVFTHNLDTANTLMRALRVGSVWINCFDVF-DAAIPFGGYKQSGQGREKGSYSLSNYLQVKA 482 (493)
Q Consensus 404 ~~~eai~~~n~~~~gl~a~v~t~d~~~~~~~~~~l~~g~V~VN~~~~~-~~~~pfGG~~~SG~G~~~g~~~l~~~~~~k~ 482 (493)
|+||||+++|+++|||+++|||+|.+.++++++++++|+|+||+++.. .+.+||||+|.||+|+++|.+++++|++.|+
T Consensus 401 ~~deAi~~aN~~~~gL~a~v~t~d~~~a~~~~~~l~aG~V~vN~~~~~~~~~~PfGG~~~SG~Gr~~G~~~l~~ft~~k~ 480 (508)
T 3r64_A 401 DEAHAAELANASDFGLSAAVWSKDIDRAAQFALQIDSGMVHINDLTVNDEPHVMFGGSKNSGLGRFNGDWAIEEFTTDRW 480 (508)
T ss_dssp SHHHHHHHHTSSSCCSCEEEECSCHHHHHHHHTTSCSSEEEECC--------------------CCCHHHHHHHTEEEEE
T ss_pred CHHHHHHHHhCCCCCcEEEEEcCCHHHHHHHHHhCCcceEEEcCCCCCCCCCCCcCCcCCCCCCcCccHHHHHHhhceEE
Confidence 999999999999999999999999999999999999999999998654 6889999999999999999999999999999
Q ss_pred EEEeC
Q 011130 483 VVTAL 487 (493)
Q Consensus 483 v~~~~ 487 (493)
|+++.
T Consensus 481 v~~~~ 485 (508)
T 3r64_A 481 IGIKR 485 (508)
T ss_dssp EEEEC
T ss_pred EEEec
Confidence 99885
No 26
>4dng_A Uncharacterized aldehyde dehydrogenase ALDY; structural genomics, protein structure initiative, nysgrc, P biology; 2.50A {Bacillus subtilis}
Probab=100.00 E-value=3.8e-87 Score=705.08 Aligned_cols=419 Identities=29% Similarity=0.475 Sum_probs=375.2
Q ss_pred ccccceeCCEeeeCCCCCeeeeecCCCCCeEEEEecCCHHHHHHHHHHHHHHccCCCCCCCCHHHHHHHHHHHHHHHHHh
Q 011130 64 DYTQLLINGQFVDSASGKTFPTLDPRTGDVITHVAEGEAEDVNRAVSAARKAFDEGPWPRMTAYERSKIILRFADLLERH 143 (493)
Q Consensus 64 ~~~~~~I~G~~~~~~~~~~~~v~~P~tg~~i~~v~~~~~~~v~~av~~A~~A~~~~~w~~~~~~~R~~iL~~la~~l~~~ 143 (493)
+.+++||||+|+.+.++++++++||+||+++++++.++.+|+++++++|++||+ .|++++..+|.++|++++++|+++
T Consensus 5 ~~~~~~i~g~~~~~~~~~~~~~~~P~t~~~~~~~~~~~~~~v~~av~~A~~A~~--~w~~~~~~~R~~~L~~~a~~l~~~ 82 (485)
T 4dng_A 5 TLNKSFINGKWTGGESGRTEDILNPYDQSVITTASLATGKQLEDAFDIAQKAQK--EWAKSTTEDRKAVLQKARGYLHEN 82 (485)
T ss_dssp GCCSEEETTEEECCSSSCEEEEECTTTCCEEEEEECCCHHHHHHHHHHHHHHHH--HHTTCCHHHHHHHHHHHHHHHHHT
T ss_pred cccceeECCEEecCCCCCeEEeECCCCCCEEEEEcCCCHHHHHHHHHHHHHHHH--HhCcCCHHHHHHHHHHHHHHHHHH
Confidence 346889999999877889999999999999999999999999999999999999 999999999999999999999999
Q ss_pred HHHHHHHHHHHcCCChhhhhhccHHHHHHHHHHHHHhhHHhcCccCCCC--CCceeEEEeeeeeeE--------------
Q 011130 144 NDEIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADKIQGLTAPAD--GPYHVQTLHEPIGVA-------------- 207 (493)
Q Consensus 144 ~~ela~~~~~e~Gk~~~~a~~~Ev~~~~~~l~~~a~~~~~~~~~~~~~~--~~~~~~~~~~PlGVv-------------- 207 (493)
.++|++++++|+|||+.+++. |+..+++.++|++++.+++.+...+.. .+...++.++|+|||
T Consensus 83 ~~ela~~~~~e~Gk~~~~a~~-ev~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~PwN~P~~~~~ 161 (485)
T 4dng_A 83 RDDIIMMIARETGGTIIKSTI-ELEQTIAILDEAMTYTGELGGVKEVPSDIEGKTNKIYRLPLGVISSISPFNFPMNLSM 161 (485)
T ss_dssp HHHHHHHHHHHHCCCHHHHHH-HHHHHHHHHHHHHHHGGGCSCEECCCCSSTTEEEEEEEEECCEEEEECCSSSHHHHHH
T ss_pred HHHHHHHHHHHhCCCHHHHHH-HHHHHHHHHHHHHHHHHHhCCeeccccCCCCceEEEEEecceEEEEECCCccHHHHHH
Confidence 999999999999999999986 999999999999999888777655532 346788999999999
Q ss_pred ----------------------------------------eEEEeeeCCccchhhhhhccccccEEEEecCcHHHHHHHH
Q 011130 208 ----------------------------------------GVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQ 247 (493)
Q Consensus 208 ----------------------------------------gvv~vv~~~~~~~~~~L~~~~~v~~v~fTGs~~~g~~v~~ 247 (493)
|++|+|++.+.++++.|+.||+||+|+||||+.+|+.|++
T Consensus 162 ~~~~~ALaaGN~VVlKps~~tp~~~~~~l~~~l~~aGlP~gvv~vv~g~~~~~~~~L~~~p~v~~v~fTGS~~~g~~i~~ 241 (485)
T 4dng_A 162 RSIAPAIALGNSVVHKPDIQTAISGGTIIAKAFEHAGLPAGVLNVMLTDVKEIGDGMLTNPIPRLISFTGSTAVGRHIGE 241 (485)
T ss_dssp HHHHHHHHTTCEEEEECCGGGHHHHTHHHHHHHHHTTCCTTSEEECCCCHHHHTTHHHHCSSCSEEEEEECHHHHHHHHH
T ss_pred HHHHHHHHcCCEEEEECCCcChHHHHHHHHHHHHHhCcCCCeEEEEeCCChhHHHHHHhCCCCCEEEEECCcHHHHHHHH
Confidence 8999999987779999999999999999999999999999
Q ss_pred HHhhcCCCceeEecCCCCceEEccCCCHHHHHHHHHHHHHhhcCCcccCCCeeEecchhHHHHHHHHHHHHhhcccCCCC
Q 011130 248 LAAKSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMKRVVGDPF 327 (493)
Q Consensus 248 ~a~~~~~~pv~lelgG~~p~iV~~daDl~~aa~~i~~~~~~~~GQ~C~a~~~v~V~~~i~d~f~~~l~~~~~~~~vg~p~ 327 (493)
.+++ ++||+++|||||||+||++|||++.|++.+++++|.|+||.|+++++||||++++|+|+++|++++.++++|+|.
T Consensus 242 ~aa~-~~~~v~lElGGk~p~iV~~dADl~~Aa~~i~~~~~~~~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~~g~~~ 320 (485)
T 4dng_A 242 IAGR-AFKRMALELGGNNPFAVLSDADVDRAVDAAIFGKFIHQGQICMIINRIIVHQDVYDEFVEKFTARVKQLPYGDQT 320 (485)
T ss_dssp HHHH-HTCEEEEEECCCEEEEECTTSCHHHHHHHHHHHHTTCC----CCEEEEEEEHHHHHHHHHHHHHHHHHCCBSCTT
T ss_pred HHhh-hccchhhhcCCCCceEEcCCCCHHHHHHHHHHHHHhcCCCccccCCEEEEeHHHHHHHHHHHHHHHHhccCCCCC
Confidence 9988 899999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCccccCCCHHHHHHHHHHHHHHHhCCCEEEeCCcccCCCCceeeceEEecCCCCccccccccccceEEEEEeCCHHH
Q 011130 328 KGGIQQGPQIDSEQFEKILKYIRSGVDGGAKLETGGERLGAKGYYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYKDLDE 407 (493)
Q Consensus 328 ~~~~~~gpli~~~~~~~~~~~i~~a~~~ga~v~~gg~~~~~~g~~~~Ptvl~~~~~~~~i~~~E~fgPvl~v~~~~~~~e 407 (493)
|+++++||+++..+++++.++|++++++|+++++||.. .|+|++|||+.+++++|++++||+||||++|++|+|+||
T Consensus 321 ~~~~~~gpli~~~~~~~v~~~i~~a~~~Ga~v~~gg~~---~g~~~~Ptvl~~v~~~~~i~~eE~FGPvl~v~~~~~~~e 397 (485)
T 4dng_A 321 DPKTVVGPLINERQIEKALEIIEQAKTDGIELAVEGKR---VGNVLTPYVFVGADNNSKIAQTELFAPIATIIKAGSDQE 397 (485)
T ss_dssp STTCSBCCCSSHHHHHHHHHHHHHHHHTTCEEEECCCE---ETTEECCEEEESCCTTSHHHHCCCCSSEEEEEEESSHHH
T ss_pred cCCCccCCCCCHHHHHHHHHHHHHHHHCCCEEEeCCCC---CCcEECCEEEecCCCCChhhcCccccceEEEEEeCCHHH
Confidence 99999999999999999999999999999999999976 689999999999999999999999999999999999999
Q ss_pred HHHHHHcCCCCcEEEEecCCHHHHHHHHHhcceeEEEECCcCCC-CCCCCccCCCCCCCCCcchHHHHHhhhhceEEEEe
Q 011130 408 VIQRSNASQYGLAAGVFTHNLDTANTLMRALRVGSVWINCFDVF-DAAIPFGGYKQSGQGREKGSYSLSNYLQVKAVVTA 486 (493)
Q Consensus 408 ai~~~n~~~~gl~a~v~t~d~~~~~~~~~~l~~g~V~VN~~~~~-~~~~pfGG~~~SG~G~~~g~~~l~~~~~~k~v~~~ 486 (493)
||+++|+++|||+++|||+|.+.++++++++++|+||||+++.. .+.+||||+|.||+|+++|.+++++|++.|+|+++
T Consensus 398 Ai~~an~~~~gL~a~v~t~d~~~a~~~~~~l~~G~v~vN~~~~~~~~~~pfGG~~~SG~G~~~g~~~l~~~t~~k~v~~~ 477 (485)
T 4dng_A 398 AIDMANDTEYGLSSAVFTSDLEKGEKFALQIDSGMTHVNDQSVNDSPNIAFGGNKASGVGRFGNPWVVEEFTVTKWISIQ 477 (485)
T ss_dssp HHHHHHCSSCCSEEEEECSCHHHHHHHHTTSCSSEEEESCC----------------------CHHHHHHHEEEEEEEEE
T ss_pred HHHHHhCCCCCceEEEECCCHHHHHHHHHhcCcceEEECCCCCCCCCCCCcCCcCCCCCCccchHHHHHHhhceEEEEEe
Confidence 99999999999999999999999999999999999999998654 68899999999999999999999999999999988
Q ss_pred CCC
Q 011130 487 LKN 489 (493)
Q Consensus 487 ~~~ 489 (493)
+..
T Consensus 478 ~~~ 480 (485)
T 4dng_A 478 KQY 480 (485)
T ss_dssp C--
T ss_pred cCC
Confidence 643
No 27
>2w8n_A Succinate-semialdehyde dehydrogenase, mitochondrial; mitochondrion, oxidoreductase, transit peptide, disease mutation, SSA, NAD, ssadh; 2.00A {Homo sapiens} PDB: 2w8o_A 2w8p_A 2w8q_A 2w8r_A*
Probab=100.00 E-value=3e-87 Score=704.70 Aligned_cols=414 Identities=34% Similarity=0.567 Sum_probs=392.8
Q ss_pred ccceeCCEeeeCCCCCeeeeecCCCCCeEEEEecCCHHHHHHHHHHHHHHccCCCCCCCCHHHHHHHHHHHHHHHHHhHH
Q 011130 66 TQLLINGQFVDSASGKTFPTLDPRTGDVITHVAEGEAEDVNRAVSAARKAFDEGPWPRMTAYERSKIILRFADLLERHND 145 (493)
Q Consensus 66 ~~~~I~G~~~~~~~~~~~~v~~P~tg~~i~~v~~~~~~~v~~av~~A~~A~~~~~w~~~~~~~R~~iL~~la~~l~~~~~ 145 (493)
.++||||+|+.+. ++++++||+||+++++++.++.+|+++++++|++||+ .|+++|..+|.++|++++++|++|.+
T Consensus 13 ~~~~i~g~~~~~~--~~~~~~~P~tg~~~~~~~~~~~~~v~~av~~A~~A~~--~w~~~~~~~R~~~L~~~a~~l~~~~~ 88 (487)
T 2w8n_A 13 TDSFVGGRWLPAA--ATFPVQDPASGAALGMVADCGVREARAAVRAAYEAFC--RWREVSAKERSSLLRKWYNLMIQNKD 88 (487)
T ss_dssp CSEEETTEEECCS--CEEEEECTTTCCEEEEEECCCHHHHHHHHHHHHHHHH--HHTTSCHHHHHHHHHHHHHHHHHTHH
T ss_pred cCeeECCEEecCC--CeEEEECCCCCCEEEEEeCCCHHHHHHHHHHHHHHHH--HhccCCHHHHHHHHHHHHHHHHHHHH
Confidence 4689999999753 7899999999999999999999999999999999999 99999999999999999999999999
Q ss_pred HHHHHHHHHcCCChhhhhhccHHHHHHHHHHHHHhhHHhcCccCCC-CCCceeEEEeeeeeeE-----------------
Q 011130 146 EIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADKIQGLTAPA-DGPYHVQTLHEPIGVA----------------- 207 (493)
Q Consensus 146 ela~~~~~e~Gk~~~~a~~~Ev~~~~~~l~~~a~~~~~~~~~~~~~-~~~~~~~~~~~PlGVv----------------- 207 (493)
+|++++++|+|||+.++.. |+..+++.++|++++++++.+...+. ..+...++.++|+|||
T Consensus 89 ela~~~~~e~Gk~~~ea~~-ev~~~~~~~~~~a~~~~~~~g~~~~~~~~~~~~~~~~~P~GVv~~I~PwN~P~~~~~~~~ 167 (487)
T 2w8n_A 89 DLARIITAESGKPLKEAHG-EILYSAFFLEWFSEEARRVYGDIIHTPAKDRRALVLKQPIGVAAVITPWNFPSAMITRKV 167 (487)
T ss_dssp HHHHHHHHHHCCCHHHHHH-HHHHHHHHHHHHHHHGGGCCCEEECCSCTTCEEEEEEEECCEEEEECCSSSTTHHHHHHH
T ss_pred HHHHHHHHHhCCCHHHHHH-HHHHHHHHHHHHHHHHHHhcCcccccCCCCceeEEEEecceEEEEECCCcchHHHHHHHH
Confidence 9999999999999999985 99999999999999988877665443 2345678999999999
Q ss_pred ------------------------------------eEEEeee---CCccchhhhhhccccccEEEEecCcHHHHHHHHH
Q 011130 208 ------------------------------------GVLNIVS---GYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQL 248 (493)
Q Consensus 208 ------------------------------------gvv~vv~---~~~~~~~~~L~~~~~v~~v~fTGs~~~g~~v~~~ 248 (493)
|++|+|+ |.+.++++.|+.||+||+|+||||+.+|+.|++.
T Consensus 168 ~~ALaaGN~VVlKps~~tp~t~~~l~~l~~~aGlP~gvv~vv~~~~g~~~~~~~~L~~~~~v~~V~fTGS~~~g~~i~~~ 247 (487)
T 2w8n_A 168 GAALAAGCTVVVKPAEDTPFSALALAELASQAGIPSGVYNVIPCSRKNAKEVGEAICTDPLVSKISFTGSTTTGKILLHH 247 (487)
T ss_dssp HHHHHHTCEEEEECCTTCCHHHHHHHHHHHHHTCCTTSEEECCCCHHHHHHHHHHHTTCTTEEEEEEEECHHHHHHHHHH
T ss_pred HHHHHcCCEEEEECCCcchHHHHHHHHHHHHhCCCCCeEEEEecCCCCcHHHHHHHHhCCCcCEEEEeCCHHHHHHHHHH
Confidence 8999999 7677789999999999999999999999999999
Q ss_pred HhhcCCCceeEecCCCCceEEccCCCHHHHHHHHHHHHHhhcCCcccCCCeeEecchhHHHHHHHHHHHHhh-cccCCCC
Q 011130 249 AAKSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMK-RVVGDPF 327 (493)
Q Consensus 249 a~~~~~~pv~lelgG~~p~iV~~daDl~~aa~~i~~~~~~~~GQ~C~a~~~v~V~~~i~d~f~~~l~~~~~~-~~vg~p~ 327 (493)
+++ ++||+++|||||||+||++|||++.|++.+++++|.|+||.|+++++||||++++|+|+++|++++++ +++|||.
T Consensus 248 aa~-~~~pv~lElGGk~p~iV~~dADl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~~~G~p~ 326 (487)
T 2w8n_A 248 AAN-SVKRVSMELGGLAPFIVFDSANVDQAVAGAMASKFRNTGQTCVCSNQFLVQRGIHDAFVKAFAEAMKKNLRVGNGF 326 (487)
T ss_dssp HHT-TTCEEEEEECEEEEEEECTTSCHHHHHHHHHHHHTCCCSCCCSEEEEEEEEHHHHHHHHHHHHHHHHHHCCBSCTT
T ss_pred Hhc-cCCcEEEecCCCCeEEECCCCCHHHHHHHHHHHHHhCCCCccccCCEEEEcccHHHHHHHHHHHHHHhhcccCCcc
Confidence 998 89999999999999999999999999999999999999999999999999999999999999999999 9999999
Q ss_pred CCCCccccCCCHHHHHHHHHHHHHHHhCCCEEEeCCcccCCCCc-eeeceEEecCCCCccccccccccceEEEEEeCCHH
Q 011130 328 KGGIQQGPQIDSEQFEKILKYIRSGVDGGAKLETGGERLGAKGY-YIKPTVFTGVKDDMLIAKDEIFGPVQSILKYKDLD 406 (493)
Q Consensus 328 ~~~~~~gpli~~~~~~~~~~~i~~a~~~ga~v~~gg~~~~~~g~-~~~Ptvl~~~~~~~~i~~~E~fgPvl~v~~~~~~~ 406 (493)
++++++||+++..+++++.++|++++++|+++++||... ..|+ |++|||+.+++++|++++||+||||++|++|+|+|
T Consensus 327 ~~~~~~gpli~~~~~~rv~~~i~~a~~~Ga~~~~gg~~~-~~g~~~~~Ptvl~~v~~~~~i~~eEiFGPVl~v~~~~~~~ 405 (487)
T 2w8n_A 327 EEGTTQGPLINEKAVEKVEKQVNDAVSKGATVVTGGKRH-QLGKNFFEPTLLCNVTQDMLCTHEETFGPLAPVIKFDTEE 405 (487)
T ss_dssp STTCCBCCCSSHHHHHHHHHHHHHHHTTTCEEEECCSBC-TTCTTCBCCEEEEEECGGGGTTCTTCCSSEEEEEEESCHH
T ss_pred cccCcccCCCCHHHHHHHHHHHHHHHHCCCEEEeCCccC-CCCCceECCEEEecCCCcchhhhcccccceEEEEEeCCHH
Confidence 999999999999999999999999999999999999764 3689 99999999999999999999999999999999999
Q ss_pred HHHHHHHcCCCCcEEEEecCCHHHHHHHHHhcceeEEEECCcCCCCCCCCccCCCCCCCCCcchHHHHHhhhhceEEEEe
Q 011130 407 EVIQRSNASQYGLAAGVFTHNLDTANTLMRALRVGSVWINCFDVFDAAIPFGGYKQSGQGREKGSYSLSNYLQVKAVVTA 486 (493)
Q Consensus 407 eai~~~n~~~~gl~a~v~t~d~~~~~~~~~~l~~g~V~VN~~~~~~~~~pfGG~~~SG~G~~~g~~~l~~~~~~k~v~~~ 486 (493)
|||+++|+++|||+++|||+|.+.++++++++++|+|+||++....+.+||||+|.||+|+++|.+++++|++.|+|+.+
T Consensus 406 eAi~~aN~~~~gL~a~v~t~d~~~a~~~~~~l~aG~v~vN~~~~~~~~~PfGG~~~SG~G~~~G~~~l~~f~~~k~v~~~ 485 (487)
T 2w8n_A 406 EAIAIANAADVGLAGYFYSQDPAQIWRVAEQLEVGMVGVNEGLISSVECPFGGVKQSGLGREGSKYGIDEYLELKYVCYG 485 (487)
T ss_dssp HHHHHHTCTTCCSEEEEECCCHHHHHHHHHHSCSSEEEESCSCCCCTTSCBCCSGGGEESCBSTTTGGGGGEEEEEEEEC
T ss_pred HHHHHHhCCCCCceEEEeCCCHHHHHHHHHhCCeeeEEEcCCCCCCCCCCCCCCCCCCcCCCchHHHHHHhcCccEEEEe
Confidence 99999999999999999999999999999999999999999877778899999999999999999999999999999875
No 28
>3pqa_A Lactaldehyde dehydrogenase; structural genomics, protein structure initiative, nysgrc, P biology, oxidoreductase; 1.50A {Methanocaldococcus jannaschii} PDB: 3rhd_A*
Probab=100.00 E-value=6.3e-87 Score=700.87 Aligned_cols=405 Identities=29% Similarity=0.527 Sum_probs=379.4
Q ss_pred ceeCCEeeeCCCCCeeeeecCCCCCeEEEEecCCHHHHHHHHHHHHHHccCCCCCCCCHHHHHHHHHHHHHHHHHhHHHH
Q 011130 68 LLINGQFVDSASGKTFPTLDPRTGDVITHVAEGEAEDVNRAVSAARKAFDEGPWPRMTAYERSKIILRFADLLERHNDEI 147 (493)
Q Consensus 68 ~~I~G~~~~~~~~~~~~v~~P~tg~~i~~v~~~~~~~v~~av~~A~~A~~~~~w~~~~~~~R~~iL~~la~~l~~~~~el 147 (493)
+||||+|+.+ ++ ++++||+||+++++++.++.+|+++|+++|++||+ .|+.++..+|.++|++++++|+++.++|
T Consensus 2 ~~I~G~~~~~--~~-~~~~nP~tg~~i~~~~~~~~~~v~~av~aA~~A~~--~w~~~~~~~R~~~L~~~a~~l~~~~~el 76 (486)
T 3pqa_A 2 MFIDGKWINR--ED-MDVINPYSLEVIKKIPALSREEAKEAIDTAEKYKE--VMKNLPITKRYNILMNIAKQIKEKKEEL 76 (486)
T ss_dssp -------CCC--CC-EEEECTTTCCEEEEECCCCHHHHHHHHHHHHHTHH--HHHTCCHHHHHHHHHHHHHHHHHTHHHH
T ss_pred eeECCEEecC--CC-eEEECCCCCCEEEEEcCCCHHHHHHHHHHHHHHHH--HhhhCCHHHHHHHHHHHHHHHHHHHHHH
Confidence 5899999974 56 99999999999999999999999999999999999 9999999999999999999999999999
Q ss_pred HHHHHHHcCCChhhhhhccHHHHHHHHHHHHHhhHHhcCccCCCCCCceeEEEeeeeeeE--------------------
Q 011130 148 AALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADKIQGLTAPADGPYHVQTLHEPIGVA-------------------- 207 (493)
Q Consensus 148 a~~~~~e~Gk~~~~a~~~Ev~~~~~~l~~~a~~~~~~~~~~~~~~~~~~~~~~~~PlGVv-------------------- 207 (493)
++++++|+|||..+++. |+..+++.++|++++++++.+...+.. +...++.++|+|||
T Consensus 77 a~~~~~e~Gk~~~ea~~-Ev~~~~~~~~~~a~~~~~~~~~~~~~~-~~~~~~~~~P~GVv~~I~PwN~P~~~~~~~~~~A 154 (486)
T 3pqa_A 77 AKILAIDAGKPIKQARV-EVERSIGTFKLAAFYVKEHRDEVIPSD-DRLIFTRREPVGIVGAITPFNFPLNLSAHKIAPA 154 (486)
T ss_dssp HHHHHHHHCCCHHHHHH-HHHHHHHHHHHHHHHHHHCCEEEECCT-TEEEEEEEEECSEEEEEECSSSHHHHHHHHHHHH
T ss_pred HHHHHHHhCCCHHHHHH-HHHHHHHHHHHHHHHHHHhcCceecCC-CceeEEEEccccEEEEECCCchHHHHHHHHHHHH
Confidence 99999999999999985 999999999999999988776655543 56788999999999
Q ss_pred -------------------------------------eEEEeeeCCccchhhhhhccccccEEEEecCcHHHHHHHHHHh
Q 011130 208 -------------------------------------GVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLAA 250 (493)
Q Consensus 208 -------------------------------------gvv~vv~~~~~~~~~~L~~~~~v~~v~fTGs~~~g~~v~~~a~ 250 (493)
|++|+|++.+.++++.|+.||+||+|+||||+.+|+.|++.++
T Consensus 155 LaaGN~VVlKps~~tp~t~~~l~~l~~~al~~~GlP~gvv~vv~g~~~~~g~~L~~~p~vd~V~fTGS~~~g~~i~~~aa 234 (486)
T 3pqa_A 155 IATGNVIVHHPSSKAPLVCIELAKIIENALKKYNVPLGVYNLLTGAGEVVGDEIVVNEKVNMISFTGSSKVGELITKKAG 234 (486)
T ss_dssp HHTTCEEEEEECTTSCHHHHHHHHHHHHHHHHTTCCGGGEEECCSCTTTHHHHHHHCTTCCEEEEESCHHHHHHHHHHCC
T ss_pred HHcCCEEEEECCCCchHHHHHHHHHHHHHHHhcCCCCCeEEEEeCCchHHHHHHHhCCCccEEEEECChHHHHHHHHHcC
Confidence 8899999988888999999999999999999999999999875
Q ss_pred hcCCCceeEecCCCCceEEccCCCHHHHHHHHHHHHHhhcCCcccCCCeeEecchhHHHHHHHHHHHHhhcccCCCCCCC
Q 011130 251 KSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMKRVVGDPFKGG 330 (493)
Q Consensus 251 ~~~~~pv~lelgG~~p~iV~~daDl~~aa~~i~~~~~~~~GQ~C~a~~~v~V~~~i~d~f~~~l~~~~~~~~vg~p~~~~ 330 (493)
+||+++|||||||+||++|||++.|++.+++++|.|+||.|++++|||||++++|+|+++|+++++++++|||+|++
T Consensus 235 ---~~~v~lELGGk~p~iV~~dADl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~~g~p~~~~ 311 (486)
T 3pqa_A 235 ---FKKIALELGGVNPNIVLKDADLNKAVNALIKGSFIYAGQVCISVGMILVDESIADKFIEMFVNKAKVLNVGNPLDEK 311 (486)
T ss_dssp ---SSEEEEECCCCEEEEECTTSCHHHHHHHHHHHHHGGGGCSTTSEEEEEEEGGGHHHHHHHHHHHHHTCCBSCTTSTT
T ss_pred ---CCceeeccCCcCcEEEcCCCCHHHHHHHHHHHHHhcCCCCccCCcEEEEeHHHHHHHHHHHHHHHHhcccCCCCcCC
Confidence 69999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CccccCCCHHHHHHHHHHHHHHHhCCCEEEeCCcccCCCCceeeceEEecCCCCccccccccccceEEEEEeCCHHHHHH
Q 011130 331 IQQGPQIDSEQFEKILKYIRSGVDGGAKLETGGERLGAKGYYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYKDLDEVIQ 410 (493)
Q Consensus 331 ~~~gpli~~~~~~~~~~~i~~a~~~ga~v~~gg~~~~~~g~~~~Ptvl~~~~~~~~i~~~E~fgPvl~v~~~~~~~eai~ 410 (493)
+++||+++..+++++.++|++++++|+++++||.. .|+|++|||+ +++++|++++||+||||++|++|+| ||||+
T Consensus 312 ~~~gpli~~~~~~~v~~~i~~a~~~Ga~v~~gG~~---~g~~~~Ptvl-~v~~~~~i~~eEiFGPVl~v~~~~~-deAi~ 386 (486)
T 3pqa_A 312 TDVGPLISVEHAEWVEKVVEKAIDEGGKLLLGGKR---DKALFYPTIL-EVDRDNILCKTETFAPVIPIIRTNE-EEMID 386 (486)
T ss_dssp CSBCCCSCHHHHHHHHHHHHHHHHTTCEEEECCCE---ETTEECCEEE-ECCTTSGGGTCCCCSSEEEEEEECH-HHHHH
T ss_pred CCcCCCCCHHHHHHHHHHHHHHHHCCCEEEecCCC---CCcEeccEEE-eCCCCChhhcccccccEEEEEEEcH-HHHHH
Confidence 99999999999999999999999999999999975 5899999999 9999999999999999999999999 99999
Q ss_pred HHHcCCCCcEEEEecCCHHHHHHHHHhcceeEEEECCcCCC-CCCCCccCCCCCCCCCcchHHHHHhhhhceEEEEeC
Q 011130 411 RSNASQYGLAAGVFTHNLDTANTLMRALRVGSVWINCFDVF-DAAIPFGGYKQSGQGREKGSYSLSNYLQVKAVVTAL 487 (493)
Q Consensus 411 ~~n~~~~gl~a~v~t~d~~~~~~~~~~l~~g~V~VN~~~~~-~~~~pfGG~~~SG~G~~~g~~~l~~~~~~k~v~~~~ 487 (493)
++|+++|||+++|||+|.+.++++++++++|+|+||+++.. .+.+||||+|+||+|+++|.+++++|++.|+|+++.
T Consensus 387 ~aN~~~~gL~a~v~t~d~~~a~~~~~~l~aG~v~vN~~~~~~~~~~PfGG~k~SG~Gr~~g~~gl~~f~~~k~v~~~~ 464 (486)
T 3pqa_A 387 IANSTEYGLHSAIFTNDINKSLKFAENLEFGGVVINDSSLFRQDNMPFGGVKKSGLGREGVKYAMEEMSNIKTIIISK 464 (486)
T ss_dssp HHTCSSCCSEEEEECSBHHHHHHHHHHSCSSEEEESSCTTCCCTTSCBCCSGGGEESCBSHHHHHHHTEEEEEEEEEC
T ss_pred HHhcCCCCcEEEEECCCHHHHHHHHHhCCcceEEEeCCCCcCCCCCCCCCcCcCcCCCCCcHHHHHHhhceEEEEEcC
Confidence 99999999999999999999999999999999999998653 358999999999999999999999999999998875
No 29
>3ros_A NAD-dependent aldehyde dehydrogenase; nysgrc, PSI-biology, structural genomics, NEW YORK structura genomics research consortium; 1.88A {Lactobacillus acidophilus}
Probab=100.00 E-value=6.1e-87 Score=700.63 Aligned_cols=401 Identities=26% Similarity=0.442 Sum_probs=385.8
Q ss_pred eeeeecCCCCCeEEEEecCCHHHHHHHHHHHHHHccCCCCCCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCChhh
Q 011130 82 TFPTLDPRTGDVITHVAEGEAEDVNRAVSAARKAFDEGPWPRMTAYERSKIILRFADLLERHNDEIAALETWDNGKPFEQ 161 (493)
Q Consensus 82 ~~~v~~P~tg~~i~~v~~~~~~~v~~av~~A~~A~~~~~w~~~~~~~R~~iL~~la~~l~~~~~ela~~~~~e~Gk~~~~ 161 (493)
+++++||+||++|++++.++.+|+++++++|++||+ .|++++..+|.++|++++++|+++.++|++++++|+|||..+
T Consensus 5 ~~~~~nP~tg~~i~~~~~~~~~~v~~av~~A~~A~~--~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~e 82 (484)
T 3ros_A 5 KYQSVNPYTNEAFASYDNPTSKQIDEAINLAHALYK--KWRHEEPASRAEILHDIANALKEHEDELAKMMTLEMGKLLSE 82 (484)
T ss_dssp CCEEEETTTTEEEEECCCCCHHHHHHHHHHHHHHHH--HHTTSCTHHHHHHHHHHHHHHHHTHHHHHHHHHHHHCCCHHH
T ss_pred ccceeCCCCCCEEEEECCCCHHHHHHHHHHHHHHHH--HhCcCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhCCCHHH
Confidence 589999999999999999999999999999999999 999999999999999999999999999999999999999999
Q ss_pred hhhccHHHHHHHHHHHHHhhHHhcCccCCCCCCceeEEEeeeeeeE----------------------------------
Q 011130 162 SAQTEVPMTTRLFRYYAGWADKIQGLTAPADGPYHVQTLHEPIGVA---------------------------------- 207 (493)
Q Consensus 162 a~~~Ev~~~~~~l~~~a~~~~~~~~~~~~~~~~~~~~~~~~PlGVv---------------------------------- 207 (493)
++ .|+..+++.++|++++++++.+...+...+...++.++|+|||
T Consensus 83 a~-~ev~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~P~GVV~~I~PwN~P~~~~~~~~a~ALaaGN~VVlKps~~ 161 (484)
T 3ros_A 83 SK-EEVELCVSICNYYADHGPEMLKPTKLNSDLGNAYYLKQSTGVIMACEPWNFPLYQVIRVFAPNFIVGNPILLKHAHN 161 (484)
T ss_dssp HH-HHHHHHHHHHHHHHHHHHHHTSCEEECCTTSEEEEEEECCCEEEEECCSSSTTHHHHHHHHHHHHHTCCEEEECCTT
T ss_pred HH-HHHHHHHHHHHHHHHHHHHhcCCeeccCCCceeEEEecCCceEEEECCCchHHHHHHHHHHHHHHcCCEEEEECCCC
Confidence 98 4999999999999999988877655544566889999999998
Q ss_pred -------------------eEEEeeeCCccchhhhhhccccccEEEEecCcHHHHHHHHHHhhcCCCceeEecCCCCceE
Q 011130 208 -------------------GVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLAAKSNLKPVTLELGGKSPFI 268 (493)
Q Consensus 208 -------------------gvv~vv~~~~~~~~~~L~~~~~v~~v~fTGs~~~g~~v~~~a~~~~~~pv~lelgG~~p~i 268 (493)
|++|+|++.+.++++ |+.||+||+|+||||+.+|+.|++.+++ ++||+++|||||||+|
T Consensus 162 tp~t~~~l~~l~~~aGlP~gvv~vv~g~~~~~~~-L~~~p~vd~I~fTGS~~~G~~i~~~aa~-~lk~v~lELGGk~p~i 239 (484)
T 3ros_A 162 VPGSAALTAKIIKRAGAPEGSLINLYPSYDQLAD-IIADPRIQGVALTGSERGGSAVAEAAGK-NLKKSTMELGGNDAFI 239 (484)
T ss_dssp CHHHHHHHHHHHHHHTCCTTSEEEECCCHHHHHH-HHTSTTEEEEEEESCHHHHHHHHHHHHH-TTCEEEEECCCCCEEE
T ss_pred ChHHHHHHHHHHHHhCcCcCeEEEEeCChHHHHH-HHhCCCcCEEEEECCHHHHHHHHHHHhc-cCCceEeecCCCCcce
Confidence 899999998778888 9999999999999999999999999998 8999999999999999
Q ss_pred EccCCCHHHHHHHHHHHHHhhcCCcccCCCeeEecchhHHHHHHHHHHHHhhcccCCCCCCCCccccCCCHHHHHHHHHH
Q 011130 269 VCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMKRVVGDPFKGGIQQGPQIDSEQFEKILKY 348 (493)
Q Consensus 269 V~~daDl~~aa~~i~~~~~~~~GQ~C~a~~~v~V~~~i~d~f~~~l~~~~~~~~vg~p~~~~~~~gpli~~~~~~~~~~~ 348 (493)
|++|||+|.|++.+++++|.|+||.|++++|||||++++|+|+++|+++++++++|||.|+++++||+++..+++++.++
T Consensus 240 V~~dADl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~~G~p~~~~~~~gpli~~~~~~rv~~~ 319 (484)
T 3ros_A 240 VLDDADPQVLRNVLNDARTYNDGQVCTSSKRIIVEKSRYDEVLHELKNVFSNLKAGDPLEADTTLPPMNSEKAKEKLEAQ 319 (484)
T ss_dssp ECTTCCHHHHHHHHTTTTTGGGGCCTTSCCEEEEEGGGHHHHHHHHHHHHHTCCBSCTTSTTCCBCCCSCHHHHHHHHHH
T ss_pred eCCCCCHHHHHHHHHHHHhcCCCCCccCCceEEEcHHHHHHHHHHHHHHHHhccCCCCCCCCCccCCCCCHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHhCCCEEEeCCcccCCCCceeeceEEecCCCCccccccccccceEEEEEeCCHHHHHHHHHcCCCCcEEEEecCCH
Q 011130 349 IRSGVDGGAKLETGGERLGAKGYYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYKDLDEVIQRSNASQYGLAAGVFTHNL 428 (493)
Q Consensus 349 i~~a~~~ga~v~~gg~~~~~~g~~~~Ptvl~~~~~~~~i~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~a~v~t~d~ 428 (493)
|++++++|+++++||...+..|+|++|||+.+++++|++++||+||||++|++|+|+||||+++|+++|||+++|||+|.
T Consensus 320 i~~a~~~Ga~v~~gG~~~~~~g~~~~PTvl~~v~~~~~i~~eEiFGPVl~v~~~~~~deAi~~aN~~~~GL~a~v~t~d~ 399 (484)
T 3ros_A 320 VKEAIDAGAKVFYQYPEIDSKGAFFRPTILTDIAKDNPVFDKEVFGPIAEVFVVEDDNAAIQLANDSSYGLGSSVIGSDI 399 (484)
T ss_dssp HHHHHHTTCEEEEECCCCCCSSCCCCCEEEECCCTTSTTTTSCCCSSEEEEEEESSHHHHHHHHHSSSCCSCEEEECSCH
T ss_pred HHHHHHcCCeEEecCCcCCCCCceeCCeEeecCCCCCcccccccccceEEEEEcCCHHHHHHHHhCCCCCcEEEEECCCH
Confidence 99999999999999986556899999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHhcceeEEEECCcCCCCCCCCccCCCCCCCCCcchHHHHHhhhhceEEEEeC
Q 011130 429 DTANTLMRALRVGSVWINCFDVFDAAIPFGGYKQSGQGREKGSYSLSNYLQVKAVVTAL 487 (493)
Q Consensus 429 ~~~~~~~~~l~~g~V~VN~~~~~~~~~pfGG~~~SG~G~~~g~~~l~~~~~~k~v~~~~ 487 (493)
+.++++++++++|+||||++....+.+||||+|+||+|+++|++++++|++.|+|+++.
T Consensus 400 ~~a~~~~~~l~aG~V~vN~~~~~~~~~PfGG~k~SG~Gr~~G~~gl~~ft~~K~v~~~~ 458 (484)
T 3ros_A 400 DRAKKVSAQIETGMTVINGRWITSGELPFGGIKKSGYGRELSGLGLMAFVNEHLVIDVT 458 (484)
T ss_dssp HHHHHHHHHSCSSCCEETSCCCCCTTSCBCCSGGGEESCBSHHHHHTTTCEEEEEEECG
T ss_pred HHHHHHHHhCccceEEECCCCCCCCCCCcCCcCcccCCcCchHHHHHHhheeEEEEECC
Confidence 99999999999999999998778899999999999999999999999999999999875
No 30
>2j6l_A Aldehyde dehydrogenase family 7 member A1; NAD, reductase, oxidoreductase, lysine catabolism; HET: NAI; 1.3A {Homo sapiens} PDB: 2jg7_A*
Probab=100.00 E-value=1.4e-86 Score=701.71 Aligned_cols=417 Identities=27% Similarity=0.454 Sum_probs=392.0
Q ss_pred ccccceeCCEeeeCCCCCeeeeecCCCCCeEEEEecCCHHHHHHHHHHHHHHccCCCCCCCCHHHHHHHHHHHHHHHHHh
Q 011130 64 DYTQLLINGQFVDSASGKTFPTLDPRTGDVITHVAEGEAEDVNRAVSAARKAFDEGPWPRMTAYERSKIILRFADLLERH 143 (493)
Q Consensus 64 ~~~~~~I~G~~~~~~~~~~~~v~~P~tg~~i~~v~~~~~~~v~~av~~A~~A~~~~~w~~~~~~~R~~iL~~la~~l~~~ 143 (493)
+.+++||||+|+. ++++++++||+||+++++++.++.+|+++++++|++||+ .|++++..+|.++|++++++|+++
T Consensus 22 ~~~~~~i~g~~~~--~~~~~~v~nP~tg~~i~~~~~~~~~~v~~av~~A~~A~~--~w~~~~~~~R~~~L~~~a~~l~~~ 97 (500)
T 2j6l_A 22 EENEGVYNGSWGG--RGEVITTYCPANNEPIARVRQASVADYEETVKKAREAWK--IWADIPAPKRGEIVRQIGDALREK 97 (500)
T ss_dssp SEEECEESSSEEC--CSCEEEEEETTTTEEEEEEECCCHHHHHHHHHHHHHHHH--HHTTSCHHHHHHHHHHHHHHHHHT
T ss_pred CCCCceECCEEec--CCCeEEEECCCCCCEEEEEeCCCHHHHHHHHHHHHHHHH--HhccCCHHHHHHHHHHHHHHHHHH
Confidence 4678999999994 678999999999999999999999999999999999999 999999999999999999999999
Q ss_pred HHHHHHHHHHHcCCChhhhhhccHHHHHHHHHHHHHhhHHhcCccCCCC-CCceeEEEeeeeeeE---------------
Q 011130 144 NDEIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADKIQGLTAPAD-GPYHVQTLHEPIGVA--------------- 207 (493)
Q Consensus 144 ~~ela~~~~~e~Gk~~~~a~~~Ev~~~~~~l~~~a~~~~~~~~~~~~~~-~~~~~~~~~~PlGVv--------------- 207 (493)
.++|++++++|+|||+.++. .|+..+++.++|++++.+++.+...+.. .+...++.++|+|||
T Consensus 98 ~~ela~~~~~e~Gk~~~ea~-~ev~~~~~~~~~~a~~~~~~~g~~~~~~~~~~~~~~~~~P~GVv~~I~PwN~P~~~~~~ 176 (500)
T 2j6l_A 98 IQVLGSLVSLEMGKILVEGV-GEVQEYVDICDYAVGLSRMIGGPILPSERSGHALIEQWNPVGLVGIITAFNFPVAVYGW 176 (500)
T ss_dssp HHHHHHHHHHHTCCCHHHHH-HHHHHHHHHHHHHHHHTTTCCCBEECCSSTTEEEEEEEEECSEEEEECCSSSTTHHHHH
T ss_pred HHHHHHHHHHHcCCCHHHHH-HHHHHHHHHHHHHHHHHHHhcCccccccCCCceeEEEEecccEEEEECCCcchhhHHHH
Confidence 99999999999999999986 5999999999999998877766544432 334567889999999
Q ss_pred ------------------------------------------eEEEeeeCCccchhhhhhccccccEEEEecCcHHHHHH
Q 011130 208 ------------------------------------------GVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIV 245 (493)
Q Consensus 208 ------------------------------------------gvv~vv~~~~~~~~~~L~~~~~v~~v~fTGs~~~g~~v 245 (493)
|++|+|++ +.++++.|+.||+||+|+||||+.+|+.|
T Consensus 177 ~~~~ALaaGN~VVlKps~~tp~t~~~l~~l~~~al~~aGlP~gvv~vv~g-~~~~g~~L~~~~~vd~I~FTGS~~~g~~i 255 (500)
T 2j6l_A 177 NNAIAMICGNVCLWKGAPTTSLISVAVTKIIAKVLEDNKLPGAICSLTCG-GADIGTAMAKDERVNLLSFTGSTQVGKQV 255 (500)
T ss_dssp HHHHHHHTTCEEEEECCGGGHHHHHHHHHHHHHHHHHTTCCGGGEEEECC-SHHHHHHHHHCTTCSEEEEESCHHHHHHH
T ss_pred HHHHHHHhCCEEEEECCCccHHHHHHHHHHHHHHHHhhcCCcCeEEEEeC-CHHHHHHHhcCCCcCEEEEECCHHHHHHH
Confidence 88999999 78889999999999999999999999999
Q ss_pred HHHHhhcCCCceeEecCCCCceEEccCCCHHHHHHHHHHHHHhhcCCcccCCCeeEecchhHHHHHHHHHHHHhhcccCC
Q 011130 246 LQLAAKSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMKRVVGD 325 (493)
Q Consensus 246 ~~~a~~~~~~pv~lelgG~~p~iV~~daDl~~aa~~i~~~~~~~~GQ~C~a~~~v~V~~~i~d~f~~~l~~~~~~~~vg~ 325 (493)
++.+++ ++||+++|||||||+||++|||++.|++.+++++|.|+||.|++++|||||++++|+|+++|+++++++++||
T Consensus 256 ~~~aa~-~l~~v~lELGGk~p~iV~~dADl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~~G~ 334 (500)
T 2j6l_A 256 GLMVQE-RFGRSLLELGGNNAIIAFEDADLSLVVPSALFAAVGTAGQRCTTARRLFIHESIHDEVVNRLKKAYAQIRVGN 334 (500)
T ss_dssp HHHHHH-TTCEEEEECCCCEEEEECTTCCHHHHHHHHHHHHHGGGGCSTTCEEEEEEETTTHHHHHHHHHHHHHTCCBSC
T ss_pred HHHhcc-CCCceEEEcCCCCceEECCCCCHHHHHHHHHHHHHhcCCCCcCCCcEEEEcHHHHHHHHHHHHHHhhhcccCC
Confidence 999998 8999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCCccccCCCHHHHHHHHHHHHHHHhCCCEEEeCCcccCCCCceeeceEEecCCCCccccccccccceEEEEEeCCH
Q 011130 326 PFKGGIQQGPQIDSEQFEKILKYIRSGVDGGAKLETGGERLGAKGYYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYKDL 405 (493)
Q Consensus 326 p~~~~~~~gpli~~~~~~~~~~~i~~a~~~ga~v~~gg~~~~~~g~~~~Ptvl~~~~~~~~i~~~E~fgPvl~v~~~~~~ 405 (493)
|.++++++|||+++.+++++.++|++++++|+++++||...+..|+|++|||+.+++++|++++||+||||++|++|+|+
T Consensus 335 p~~~~~~~gpli~~~~~~rv~~~i~~a~~~Ga~v~~gg~~~~~~g~~~~PTvl~~v~~~~~i~~eEiFGPVl~v~~~~~~ 414 (500)
T 2j6l_A 335 PWDPNVLYGPLHTKQAVSMFLGAVEEAKKEGGTVVYGGKVMDRPGNYVEPTIVTGLGHDASIAHTETFAPILYVFKFQNE 414 (500)
T ss_dssp TTSTTCCBCCCSCHHHHHHHHHHHHHHHHTTCEEEECCSBCSSSSSCBCCEEEESCCTTCHHHHSCCSSSEEEEEEECCH
T ss_pred cccCCCccccCCCHHHHHHHHHHHHHHHHCCCEEEECCcccCCCCCEEcCEEEECCCCcChhhcCcccCceEEEEeeCCH
Confidence 99999999999999999999999999999999999999864456999999999999999999999999999999999999
Q ss_pred HHHHHHHHcCCCCcEEEEecCCHHHHHHHH--HhcceeEEEECCcCC-CCCCCCccCCCCCCCCCcchHHHHHhhhhceE
Q 011130 406 DEVIQRSNASQYGLAAGVFTHNLDTANTLM--RALRVGSVWINCFDV-FDAAIPFGGYKQSGQGREKGSYSLSNYLQVKA 482 (493)
Q Consensus 406 ~eai~~~n~~~~gl~a~v~t~d~~~~~~~~--~~l~~g~V~VN~~~~-~~~~~pfGG~~~SG~G~~~g~~~l~~~~~~k~ 482 (493)
||||+++|+++|||+++|||+|.+++++++ .++++|+|+||++.. ..+.+||||+|+||+|+++|.+++++|++.|+
T Consensus 415 deAi~~aN~~~~gL~a~v~t~d~~~a~~~~~~~~~~~G~V~vN~~~~~~~~~~PfGG~k~SG~G~~~g~~~~~~f~~~k~ 494 (500)
T 2j6l_A 415 EEVFAWNNEVKQGLSSSIFTKDLGRIFRWLGPKGSDCGIVNVNIPTSGAEIGGAFGGEKHTGGGRESGSDAWKQYMRRST 494 (500)
T ss_dssp HHHHHHHHTSSCCSEEEEECCCHHHHHHHHSTTSCCSSEEEESSCTTCCCTTSEECCSGGGCSCCEESTTGGGGGEEEEE
T ss_pred HHHHHHHhCCCCCcEEEEECCCHHHHHHHHhhccCCeeEEEECCCCccCCCCCCcCCcCCCCCCCcchHHHHHHhhceEE
Confidence 999999999999999999999999999999 779999999998654 34789999999999999999999999999999
Q ss_pred EEEeC
Q 011130 483 VVTAL 487 (493)
Q Consensus 483 v~~~~ 487 (493)
|++++
T Consensus 495 v~~~~ 499 (500)
T 2j6l_A 495 CTINY 499 (500)
T ss_dssp EEEEC
T ss_pred EEEeC
Confidence 98753
No 31
>3ty7_A Putative aldehyde dehydrogenase SAV2122; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; HET: MSE; 2.40A {Staphylococcus aureus}
Probab=100.00 E-value=8.7e-87 Score=701.09 Aligned_cols=414 Identities=37% Similarity=0.618 Sum_probs=369.7
Q ss_pred ccccceeCCEeeeCCCCCeeeeecCCCCCeEEEEecCCHHHHHHHHHHHHHHccCCCCCCCCHHHHHHHHHHHHHHHHHh
Q 011130 64 DYTQLLINGQFVDSASGKTFPTLDPRTGDVITHVAEGEAEDVNRAVSAARKAFDEGPWPRMTAYERSKIILRFADLLERH 143 (493)
Q Consensus 64 ~~~~~~I~G~~~~~~~~~~~~v~~P~tg~~i~~v~~~~~~~v~~av~~A~~A~~~~~w~~~~~~~R~~iL~~la~~l~~~ 143 (493)
+..++||||+|+.+.++++++++||+||+++++++.++.+|+++++++|++||+ .|+.++..+|.++|++++++|+++
T Consensus 6 ~~~~~~i~G~~~~~~~~~~~~~~~P~tg~~i~~~~~~~~~~v~~av~~A~~A~~--~w~~~~~~~R~~~L~~~a~~l~~~ 83 (478)
T 3ty7_A 6 DYTKQYINGEWVESNSNETIEVINPATEEVIGKVAKGNKADVDKAVEAADDVYL--EFRHTSVKERQALLDKIVKEYENR 83 (478)
T ss_dssp ECCEEEETTEEEECSSSCEEEEECTTTCCEEEEEECCCHHHHHHHHHHHHHHHH--HHHTSCHHHHHHHHHHHHHHHHHT
T ss_pred hhhhheECCEEecCCCCCeEEeECCCCCCEEEEECCCCHHHHHHHHHHHHHHHH--HhccCCHHHHHHHHHHHHHHHHHh
Confidence 456899999999988889999999999999999999999999999999999999 999999999999999999999999
Q ss_pred HHHHHHHHHHHcCCChhhhhhccHHHHHHHHHHHHHhhHHhcCccCCCCCCceeEEEeeeeeeE----------------
Q 011130 144 NDEIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADKIQGLTAPADGPYHVQTLHEPIGVA---------------- 207 (493)
Q Consensus 144 ~~ela~~~~~e~Gk~~~~a~~~Ev~~~~~~l~~~a~~~~~~~~~~~~~~~~~~~~~~~~PlGVv---------------- 207 (493)
.++|++++++|+|||+.++...|+..+++.++|++++++++.+... ....++.++|+|||
T Consensus 84 ~~~la~~~~~e~Gk~~~ea~~~ev~~~~~~~~~~a~~~~~~~~~~~----~~~~~~~~~P~GVv~~I~PwN~P~~~~~~~ 159 (478)
T 3ty7_A 84 KDDIVQAITDELGAPLSLSERVHYQMGLNHFVAARDALDNYEFEER----RGDDLVVKEAIGVSGLITPWNFPTNQTSLK 159 (478)
T ss_dssp HHHHHHHHHHHHCCCHHHHHHTHHHHHHHHHHHHHHHHHHCCSEEE----ETTEEEEEEECCCEEEECCSSSTTHHHHHH
T ss_pred HHHHHHHHHHHhCCCHHHHhHHHHHHHHHHHHHHHHHHHHhhcccC----CccceEEecCceEEEEECCCcchHHHHHHH
Confidence 9999999999999999999546999999999999999888765432 23568899999998
Q ss_pred -------------------------------------eEEEeeeCCccchhhhhhccccccEEEEecCcHHHHHHHHHHh
Q 011130 208 -------------------------------------GVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLAA 250 (493)
Q Consensus 208 -------------------------------------gvv~vv~~~~~~~~~~L~~~~~v~~v~fTGs~~~g~~v~~~a~ 250 (493)
|++|+|++.+.++++.|+.||+||+|+||||+.+|+.|++.++
T Consensus 160 ~~~ALaaGN~VVlKps~~tp~t~~~l~~~~~~aGlP~gvv~vv~g~~~~~~~~L~~~~~v~~v~fTGS~~~G~~i~~~aa 239 (478)
T 3ty7_A 160 LAAAFAAGSPVVLKPSEETPFAAVILAEIFDKVGVPKGVFNLVNGDGAGVGNPLSEHPKVRMMSFTGSGPTGSKIMEKAA 239 (478)
T ss_dssp HHHHHHHTCCEEEECCTTSCHHHHHHHHHHHHHTCCTTTEEECCCCTTTTHHHHHHCTTCCEEEECSCHHHHCC--CSTT
T ss_pred HHHHHHcCCeEEEECCCcchHHHHHHHHHHHHhCcCcCeEEEEECCChHHHHHHHhCCCcCEEEEECcHHHHHHHHHHHH
Confidence 8999999988889999999999999999999999999999988
Q ss_pred hcCCCceeEecCCCCceEEccCCCHHHHHHHHHHHHHhhcCCcccCCCeeEecchhHHHHHHHHHHHHhhcccCCCCCCC
Q 011130 251 KSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMKRVVGDPFKGG 330 (493)
Q Consensus 251 ~~~~~pv~lelgG~~p~iV~~daDl~~aa~~i~~~~~~~~GQ~C~a~~~v~V~~~i~d~f~~~l~~~~~~~~vg~p~~~~ 330 (493)
+ ++||+++|||||||+||++|||++.|++.+++++|.|+||.|+++++||||++++|+|+++|++++.++++|||.+++
T Consensus 240 ~-~~~~v~lElGGk~p~iV~~dADl~~Aa~~i~~~~~~~~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~~g~p~~~~ 318 (478)
T 3ty7_A 240 K-DFKKVSLELGGKSPYIVLDDVDIKEAAKATTGKVVNNTGQVCTAGTRVLVPNKIKDAFLAELKEQFSQVRVGNPREDG 318 (478)
T ss_dssp T-TTCEEECCCCCCCEEEECTTSCHHHHHHHHHHHHHGGGGCCTTCCCEEEEETTTHHHHHHHHHHHHHTCCBSCTTSTT
T ss_pred h-cCCceEEecCCCCCcccCCCCCHHHHHHHHHHHHHHhCCCCccCCCeEEEcHHHHHHHHHHHHHHHHhccCCCCCCCC
Confidence 8 899999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CccccCCCHHHHHHHHHHHHHHHhCCCEEEeCCccc-C--CCCceeeceEEecCCCCccccccccccceEEEEEeCCHHH
Q 011130 331 IQQGPQIDSEQFEKILKYIRSGVDGGAKLETGGERL-G--AKGYYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYKDLDE 407 (493)
Q Consensus 331 ~~~gpli~~~~~~~~~~~i~~a~~~ga~v~~gg~~~-~--~~g~~~~Ptvl~~~~~~~~i~~~E~fgPvl~v~~~~~~~e 407 (493)
+++||+++..+++++.++|++++++|+++++||... . ..|+|++|||+.+++++|++++||+||||++|++|+|+||
T Consensus 319 ~~~gpli~~~~~~~v~~~i~~a~~~Ga~~~~gg~~~~~~~~~g~~~~Ptvl~~v~~~~~~~~eE~FGPvl~v~~~~~~~e 398 (478)
T 3ty7_A 319 TQVGPIISKKQFDQVQNYINKGIEEGAELFYGGPGKPEGLEKGYFARPTIFINVDNQMTIAQEEIFGPVMSVITYNDLDE 398 (478)
T ss_dssp CCBCCCSCHHHHHHHHHHHHHHHHHTCEEEECCSSCCTTCCSSCCCCCEEEESCCTTSHHHHSCCCSSEEEEEEESSHHH
T ss_pred CccCCCcCHHHHHHHHHHHHHHHHCCCEEEecCccCccccCCCceeCCEEEecCCCCCcccCceeECceeEEEecCCHHH
Confidence 999999999999999999999999999999999432 2 4799999999999999999999999999999999999999
Q ss_pred HHHHHHcCCCCcEEEEecCCHHHHHHHHHhcceeEEEECCcCCCCCCCCccCCCCCCCCCcchHHHHHhhhhceEEEE
Q 011130 408 VIQRSNASQYGLAAGVFTHNLDTANTLMRALRVGSVWINCFDVFDAAIPFGGYKQSGQGREKGSYSLSNYLQVKAVVT 485 (493)
Q Consensus 408 ai~~~n~~~~gl~a~v~t~d~~~~~~~~~~l~~g~V~VN~~~~~~~~~pfGG~~~SG~G~~~g~~~l~~~~~~k~v~~ 485 (493)
||+++|+++|||+++|||+|.+.++++++++++|+|+||+ +...+.+||||+|+||+|+++|.+++++||+.|+|+.
T Consensus 399 Ai~~an~~~~gL~a~v~t~d~~~a~~~~~~l~~G~v~vN~-~~~~~~~PfGG~k~SG~G~~~G~~~l~~~t~~k~v~~ 475 (478)
T 3ty7_A 399 AIQIANDTKYGLAGYVIGKDKETLHKVARSIEAGTVEINE-AGRKPDLPFGGYKQSGLGREWGDYGIEEFLEVKSIAG 475 (478)
T ss_dssp HHHHHTCSSCCSEEEEECSCHHHHHHHHHHSCSSEEEETT-CC----------------------CCGGGEEEEEEET
T ss_pred HHHHHhCCCCCceEEEECCCHHHHHHHHHhCCcCeEEECC-CCCCCCCCcCCcCcCcCCccchHHHHHHhcCeEEEEE
Confidence 9999999999999999999999999999999999999999 6667889999999999999999999999999999874
No 32
>1t90_A MMSDH, probable methylmalonate-semialdehyde dehydrogenase; oxidoreductase, NAD; HET: NAD; 2.50A {Bacillus subtilis}
Probab=100.00 E-value=4.6e-86 Score=696.03 Aligned_cols=421 Identities=29% Similarity=0.458 Sum_probs=393.8
Q ss_pred cccceeCCEeeeCCCCCeeeeecCCCCCeEEEEecCCHHHHHHHHHHHHHHccCCCCCCCCHHHHHHHHHHHHHHHHHhH
Q 011130 65 YTQLLINGQFVDSASGKTFPTLDPRTGDVITHVAEGEAEDVNRAVSAARKAFDEGPWPRMTAYERSKIILRFADLLERHN 144 (493)
Q Consensus 65 ~~~~~I~G~~~~~~~~~~~~v~~P~tg~~i~~v~~~~~~~v~~av~~A~~A~~~~~w~~~~~~~R~~iL~~la~~l~~~~ 144 (493)
..++||||+|+.+.++++++++||+||+++++++.++.+|+++++++|++||+ .|+++|..+|.++|++++++|++|.
T Consensus 5 ~~~~~i~g~~~~~~~~~~~~~~~P~t~~~~~~~~~~~~~~v~~av~~A~~A~~--~w~~~~~~~R~~~L~~~a~~l~~~~ 82 (486)
T 1t90_A 5 KLKNYINGEWVESKTDQYEDVVNPATKEVLCQVPISTKEDIDYAAQTAAEAFK--TWSKVAVPRRARILFNFQQLLSQHK 82 (486)
T ss_dssp BCCEEETTEEECCSCSCEEEEECTTTCCEEEEEECCCHHHHHHHHHHHHHHHH--HHTTSCHHHHHHHHHHHHHHHHTTH
T ss_pred ccceeECCEEecCCCCCeEEEECCCCCCEEEEEeCCCHHHHHHHHHHHHHHHH--HhhhCCHHHHHHHHHHHHHHHHHHH
Confidence 45789999999876778999999999999999999999999999999999999 9999999999999999999999999
Q ss_pred HHHHHHHHHHcCCChhhhhhccHHHHHHHHHHHHHhhHHhcCccCC-CCCCceeEEEeeeeeeE----------------
Q 011130 145 DEIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADKIQGLTAP-ADGPYHVQTLHEPIGVA---------------- 207 (493)
Q Consensus 145 ~ela~~~~~e~Gk~~~~a~~~Ev~~~~~~l~~~a~~~~~~~~~~~~-~~~~~~~~~~~~PlGVv---------------- 207 (493)
++|++++++|+|||+.++. .|+..+++.++|++.+.+.+.+...+ ...+...++.++|+|||
T Consensus 83 ~ela~~~~~e~Gk~~~~a~-~ev~~~~~~~~~~a~~~~~~~g~~~~~~~~~~~~~~~~~P~GVV~~I~PwN~P~~~~~~~ 161 (486)
T 1t90_A 83 EELAHLITIENGKNTKEAL-GEVGRGIENVEFAAGAPSLMMGDSLASIATDVEAANYRYPIGVVGGIAPFNFPMMVPCWM 161 (486)
T ss_dssp HHHHHHHHHHHCCCHHHHH-HHHHHHHHHHHHHTTHHHHHCEEEEEEEETTEEEEEEEEECSEEEEECCSSCTTHHHHHH
T ss_pred HHHHHHHHHHhCCCHHHHH-HHHHHHHHHHHHHHHHHHHhcCcccccCCCCceeEEEecccCEEEEECCCchhHHHHHHH
Confidence 9999999999999999987 49999999999999877776655433 12344678899999999
Q ss_pred -------------------------------------eEEEeeeCCccchhhhhhccccccEEEEecCcHHHHHHHHHHh
Q 011130 208 -------------------------------------GVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLAA 250 (493)
Q Consensus 208 -------------------------------------gvv~vv~~~~~~~~~~L~~~~~v~~v~fTGs~~~g~~v~~~a~ 250 (493)
|++|+|++ +.++++.|+.||+||+|+||||+.+|+.|++.++
T Consensus 162 ~~~ALaaGN~VVlKps~~tp~t~~~l~~l~~~aGlP~gvv~vv~g-~~~~~~~L~~~~~v~~I~fTGS~~~g~~i~~~aa 240 (486)
T 1t90_A 162 FPMAIALGNTFILKPSERTPLLTEKLVELFEKAGLPKGVFNVVYG-AHDVVNGILEHPEIKAISFVGSKPVGEYVYKKGS 240 (486)
T ss_dssp HHHHHHTTCEEEEECCSSSCHHHHHHHHHHHHTTCCTTSEEECCC-SHHHHHHHHHCTTEEEEEEESCHHHHHHHHHHHH
T ss_pred HHHHHHcCCEEEEECCCCChHHHHHHHHHHHHhCCCCCEEEEEEC-CHHHHHHHHhCCCCCEEEEeCCHHHHHHHHHHHh
Confidence 89999998 5678999999999999999999999999999998
Q ss_pred hcCCCceeEecCCCCceEEccCCCHHHHHHHHHHHHHhhcCCcccCCCe-eEecchhHHHHHHHHHHHHhhcccCCCCCC
Q 011130 251 KSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSR-TFVHESVYDQFVEKANALAMKRVVGDPFKG 329 (493)
Q Consensus 251 ~~~~~pv~lelgG~~p~iV~~daDl~~aa~~i~~~~~~~~GQ~C~a~~~-v~V~~~i~d~f~~~l~~~~~~~~vg~p~~~ 329 (493)
+ ++||+++|||||||+||++|||++.|++.+++++|.|+||.|++++| ||||++ +|+|+++|+++++++++|+|.++
T Consensus 241 ~-~~~pv~lElGGk~p~iV~~dADl~~Aa~~i~~~~~~n~GQ~C~a~~rvv~v~~~-~d~f~~~l~~~~~~~~vG~~~~~ 318 (486)
T 1t90_A 241 E-NLKRVQSLTGAKNHTIVLNDANLEDTVTNIVGAAFGSAGERCMACAVVTVEEGI-ADEFMAKLQEKVADIKIGNGLDD 318 (486)
T ss_dssp H-TTCEEEEECCCCEEEEECTTSCHHHHHHHHHHHHHGGGGCCTTCEEEEEEEHHH-HHHHHHHHHHHHTTCCBSCTTST
T ss_pred c-cCCcEEeccCCCCcEEECCCCCHHHHHHHHHHHHHhCCCCCcccCCeeEEecCC-HHHHHHHHHHHHHhcccCCCCcc
Confidence 8 89999999999999999999999999999999999999999999999 999999 99999999999999999999999
Q ss_pred CCccccCCCHHHHHHHHHHHHHHHhCCCEEEeCCcccC-CCCceeeceEEecCCCCccccccccccceEEEEEeCCHHHH
Q 011130 330 GIQQGPQIDSEQFEKILKYIRSGVDGGAKLETGGERLG-AKGYYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYKDLDEV 408 (493)
Q Consensus 330 ~~~~gpli~~~~~~~~~~~i~~a~~~ga~v~~gg~~~~-~~g~~~~Ptvl~~~~~~~~i~~~E~fgPvl~v~~~~~~~ea 408 (493)
++++||+++..+++++.++|++++++|+++++||...+ ..|+|++|||+.+++++|++++||+||||++|++|+|+|||
T Consensus 319 ~~~~gpli~~~~~~~v~~~i~~a~~~Ga~~~~gg~~~~~~~g~~~~Ptvl~~v~~~~~~~~eEiFGPvl~v~~~~~~~ea 398 (486)
T 1t90_A 319 GVFLGPVIREDNKKRTLSYIEKGLEEGARLVCDGRENVSDDGYFVGPTIFDNVTTEMTIWKDEIFAPVLSVIRVKNLKEA 398 (486)
T ss_dssp TCCBCCCSCHHHHHHHHHHHHHHHHHTCEEEECSSSSCCSSSSCCCCEEEESCCTTSHHHHSCCCSSEEEEEEESSHHHH
T ss_pred CCccCCCCCHHHHHHHHHHHHHHHhCCCEEEeCCccCCCCCCCEECCEEEeCCCCCCHhhcCcccCceEEEEEeCCHHHH
Confidence 99999999999999999999999999999999997432 36899999999999999999999999999999999999999
Q ss_pred HHHHHcCCCCcEEEEecCCHHHHHHHHHhcceeEEEECCcCCC-CCCCCccCCCCCCCC--CcchHHHHHhhhhceEEEE
Q 011130 409 IQRSNASQYGLAAGVFTHNLDTANTLMRALRVGSVWINCFDVF-DAAIPFGGYKQSGQG--REKGSYSLSNYLQVKAVVT 485 (493)
Q Consensus 409 i~~~n~~~~gl~a~v~t~d~~~~~~~~~~l~~g~V~VN~~~~~-~~~~pfGG~~~SG~G--~~~g~~~l~~~~~~k~v~~ 485 (493)
|+++|+++|||+++|||+|.++++++++++++|+|+||++... .+.+||||+|+||+| +++|.+++++|++.|+|+.
T Consensus 399 i~~aN~~~~gL~a~v~t~d~~~a~~~~~~l~aG~v~vN~~~~~~~~~~PfGG~k~SG~G~~~~~g~~g~~~~~~~k~v~~ 478 (486)
T 1t90_A 399 IEIANKSEFANGACLFTSNSNAIRYFRENIDAGMLGINLGVPAPMAFFPFSGWKSSFFGTLHANGKDSVDFYTRKKVVTA 478 (486)
T ss_dssp HHHHHHSSEESEEEEECCBHHHHHHHHHHCCCSEEEESCSCCCCCTTSCCCCEETTEESSSCSSHHHHHHHTEEEEEEEE
T ss_pred HHHHhCCCCCeEEEEEcCCHHHHHHHHHhCCcCeEEECCCCCCCCCCCCcCCCCcCCCCCCccchHHHHHHhhceEEEEE
Confidence 9999999999999999999999999999999999999986433 478999999999999 8999999999999999999
Q ss_pred eCCCCC
Q 011130 486 ALKNPA 491 (493)
Q Consensus 486 ~~~~~~ 491 (493)
+..+|.
T Consensus 479 ~~~~~~ 484 (486)
T 1t90_A 479 RYPAPD 484 (486)
T ss_dssp ECCCCC
T ss_pred ecCCCC
Confidence 887764
No 33
>1euh_A NADP dependent non phosphorylating glyceraldehyde-3-phosphate dehydrogenase; oxidoreductase; 1.82A {Streptococcus mutans} SCOP: c.82.1.1 PDB: 1qi6_A 2euh_A* 2id2_A* 2qe0_A* 2esd_A* 1qi1_A*
Probab=100.00 E-value=3.3e-86 Score=695.73 Aligned_cols=411 Identities=31% Similarity=0.472 Sum_probs=386.7
Q ss_pred cccceeCCEeeeCCCCCeeeeecCCCCCeEEEEecCCHHHHHHHHHHHHHHccCCCCCCCCHHHHHHHHHHHHHHHHHhH
Q 011130 65 YTQLLINGQFVDSASGKTFPTLDPRTGDVITHVAEGEAEDVNRAVSAARKAFDEGPWPRMTAYERSKIILRFADLLERHN 144 (493)
Q Consensus 65 ~~~~~I~G~~~~~~~~~~~~v~~P~tg~~i~~v~~~~~~~v~~av~~A~~A~~~~~w~~~~~~~R~~iL~~la~~l~~~~ 144 (493)
.+++||||+|+.+.+ +++++||+||+++++++.++.+|+++++++|++||+ .|+.+|..+|.++|++++++|++|.
T Consensus 4 ~~~~~i~g~~~~~~~--~~~~~~P~tg~~i~~~~~~~~~~v~~av~~A~~A~~--~w~~~~~~~R~~~L~~~a~~l~~~~ 79 (475)
T 1euh_A 4 QYKNYVNGEWKLSEN--EIKIYEPASGAELGSVPAMSTEEVDYVYASAKKAQP--AWRALSYIERAAYLHKVADILMRDK 79 (475)
T ss_dssp BCCEEETTEEECCSS--EEEEECTTTCCEEEEEECCCHHHHHHHHHHHHHHHH--HHHHSCHHHHHHHHHHHHHHHHHTH
T ss_pred ccceeECCEEecCCC--ceEEECCCCCCEEEEEeCCCHHHHHHHHHHHHHHHH--HhhhCCHHHHHHHHHHHHHHHHHhH
Confidence 457899999997543 899999999999999999999999999999999999 9999999999999999999999999
Q ss_pred HHHHHHHHHHcCCChhhhhhccHHHHHHHHHHHHHhhHHhcCccCCCC-CC----cee-EEEeeeeeeE-----------
Q 011130 145 DEIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADKIQGLTAPAD-GP----YHV-QTLHEPIGVA----------- 207 (493)
Q Consensus 145 ~ela~~~~~e~Gk~~~~a~~~Ev~~~~~~l~~~a~~~~~~~~~~~~~~-~~----~~~-~~~~~PlGVv----------- 207 (493)
++|++++++|+|||+.++.. |+..+++.++|++++++++.+...+.. .+ ... ++.++|+|||
T Consensus 80 ~ela~~~~~e~Gk~~~ea~~-ev~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~PwN~P~~ 158 (475)
T 1euh_A 80 EKIGAILSKEVAKGYKSAVS-EVVRTAEIINYAAEEGLRMEGEVLEGGSFEAASKKKIAVVRREPVGLVLAISPFNYPVN 158 (475)
T ss_dssp HHHHHHHHHHHTCCHHHHHH-HHHHHHHHHHHHHHHHTTCCEEEEEGGGTCGGGTTEEEEEEEEECSEEEEECCTTSTTH
T ss_pred HHHHHHHHHHhCCCHHHHHH-HHHHHHHHHHHHHHHHHHhcCCcccCCCCCccccceeeEEEEeccceEEEECCCCchHH
Confidence 99999999999999999874 999999999999998887665543322 23 355 8999999999
Q ss_pred ------------------------------------------eEEEeeeCCccchhhhhhccccccEEEEecCcHHHHHH
Q 011130 208 ------------------------------------------GVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIV 245 (493)
Q Consensus 208 ------------------------------------------gvv~vv~~~~~~~~~~L~~~~~v~~v~fTGs~~~g~~v 245 (493)
|++|+|++.+.++++.|+.||+||+|+||||+.+|+.|
T Consensus 159 ~~~~~~~~ALaaGN~vVlKps~~tp~t~~~l~~ll~~aGlP~gvv~vv~g~~~~~~~~L~~~~~v~~V~fTGS~~~g~~i 238 (475)
T 1euh_A 159 LAGSKIAPALIAGNVIAFKPPTQGSISGLLLAEAFAEAGLPAGVFNTITGRGSEIGDYIVEHQAVNFINFTGSTGIGERI 238 (475)
T ss_dssp HHHHHHHHHHHTTCEEEEECCSTTHHHHHHHHHHHHHHTCCTTTEEECCCCHHHHHHHHHHCTTCCEEEEESCHHHHHHH
T ss_pred HHHHHHHHHHHcCCEEEEeCCCcChHHHHHHHHHHHHhCCCcCeEEEEeCCcHHHHHHHHhCCCcCEEEEECchHHHHHH
Confidence 89999998777789999999999999999999999999
Q ss_pred HHHHhhcCCCceeEecCCCCceEEccCCCHHHHHHHHHHHHHhhcCCcccCCCeeEecchhHHHHHHHHHHHHhhcccCC
Q 011130 246 LQLAAKSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMKRVVGD 325 (493)
Q Consensus 246 ~~~a~~~~~~pv~lelgG~~p~iV~~daDl~~aa~~i~~~~~~~~GQ~C~a~~~v~V~~~i~d~f~~~l~~~~~~~~vg~ 325 (493)
++.++ +||+++|||||||+||++|||++.|++.+++++|.|+||.|+++++||||++++|+|+++|+++++++++||
T Consensus 239 ~~~aa---~~~v~lElGGk~p~iV~~dADl~~aa~~i~~~~~~n~GQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~~~~g~ 315 (475)
T 1euh_A 239 GKMAG---MRPIMLELGGKDSAIVLEDADLELTAKNIIAGAFGYSGQRCTAVKRVLVMESVADELVEKIREKVLALTIGN 315 (475)
T ss_dssp HHHTT---TSCEEEECCCCEEEEECTTSCHHHHHHHHHHHHHGGGGCCSSSEEEEEEEHHHHHHHHHHHHHHHHTSCBSC
T ss_pred HHhcC---CCcEEEEcCCcCeEEECCCCCHHHHHHHHHHHHhhcCCCcCCCCcEEEEehhHHHHHHHHHHHHHHhccCCC
Confidence 99876 699999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCCccccCCCHHHHHHHHHHHHHHHhCCCEEEeCCcccCCCCceeeceEEecCCCCccccccccccceEEEEEeCCH
Q 011130 326 PFKGGIQQGPQIDSEQFEKILKYIRSGVDGGAKLETGGERLGAKGYYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYKDL 405 (493)
Q Consensus 326 p~~~~~~~gpli~~~~~~~~~~~i~~a~~~ga~v~~gg~~~~~~g~~~~Ptvl~~~~~~~~i~~~E~fgPvl~v~~~~~~ 405 (493)
|.+ ++++||+++..+++++.++|++++++|+++++||.. .|+|++|||+.+++++|++++||+||||++|++|+|+
T Consensus 316 p~~-~~~~gpli~~~~~~~v~~~i~~a~~~Ga~~~~gG~~---~g~~~~Ptvl~~v~~~~~~~~eE~FGPvl~v~~~~~~ 391 (475)
T 1euh_A 316 PED-DADITPLIDTKSADYVEGLINDANDKGATALTEIKR---EGNLICPILFDKVTTDMRLAWEEPFGPVLPIIRVTSV 391 (475)
T ss_dssp GGG-TCSBCCCSCHHHHHHHHHHHHHHHHTTCEECSCCCE---ETTEECCEEEESCCTTSGGGTSCCCSSEEEEEEESCH
T ss_pred ccc-cCccCCCCCHHHHHHHHHHHHHHHHCCCEEEeCCcc---CCceeCCEEEeCCCCcCHHHcCccccceEEEEecCCH
Confidence 999 999999999999999999999999999999999975 5899999999999999999999999999999999999
Q ss_pred HHHHHHHHcCCCCcEEEEecCCHHHHHHHHHhcceeEEEECC-cCCCCCCCCccCCCCCCCCCcchHHHHHhhhhceEEE
Q 011130 406 DEVIQRSNASQYGLAAGVFTHNLDTANTLMRALRVGSVWINC-FDVFDAAIPFGGYKQSGQGREKGSYSLSNYLQVKAVV 484 (493)
Q Consensus 406 ~eai~~~n~~~~gl~a~v~t~d~~~~~~~~~~l~~g~V~VN~-~~~~~~~~pfGG~~~SG~G~~~g~~~l~~~~~~k~v~ 484 (493)
||||+++|+++|||+++|||+|.+.++++++++++|+|+||+ +....+.+||||+|+||+|+++|.+++++|++.|+|+
T Consensus 392 ~eai~~an~~~~gL~a~v~t~d~~~~~~~~~~l~~G~v~vN~~~~~~~~~~pfGG~k~SG~G~~~g~~~~~~~~~~k~v~ 471 (475)
T 1euh_A 392 EEAIEISNKSEYGLQASIFTNDFPRAFGIAEQLEVGTVHINNKTQRGTDNFPFLGAKKSGAGIQGVKYSIEAMTTVKSVV 471 (475)
T ss_dssp HHHHHHHHHSSEESEEEEECSCHHHHHHHHHHSCSSEEEESSCCCCCSTTSCBCCEETTEESCBSHHHHHHHTEEEEEEE
T ss_pred HHHHHHHhCCCCCeeEEEEeCCHHHHHHHHHhCCEeeEEECCCCCCCCCCCCcCCCCCCCcCCCccHHHHHHhCCeeEEE
Confidence 999999999999999999999999999999999999999999 6666789999999999999999999999999999998
Q ss_pred EeC
Q 011130 485 TAL 487 (493)
Q Consensus 485 ~~~ 487 (493)
+.+
T Consensus 472 ~~~ 474 (475)
T 1euh_A 472 FDI 474 (475)
T ss_dssp EEC
T ss_pred Eec
Confidence 764
No 34
>1uxt_A Glyceraldehyde-3-phosphate dehydrogenase (NADP+); GAPN, ALDH, glucose 1-phosphate, glycolysis, regulation, catatysis, oxidoreductase; HET: G1P NAD; 2.2A {Thermoproteus tenax} SCOP: c.82.1.1 PDB: 1uxp_A* 1uxq_A* 1uxr_A* 1uxn_A* 1uxu_A* 1uxv_A* 1ky8_A*
Probab=100.00 E-value=2.4e-86 Score=699.47 Aligned_cols=429 Identities=28% Similarity=0.408 Sum_probs=397.2
Q ss_pred cCCCCCCCCCCccccceeCCEeeeCCCCCeeeeecCCCCCeEEEEecCCHHHHHHHHHHHHHHccCCCCCCCCHHHHHHH
Q 011130 53 AEDPITPPVKVDYTQLLINGQFVDSASGKTFPTLDPRTGDVITHVAEGEAEDVNRAVSAARKAFDEGPWPRMTAYERSKI 132 (493)
Q Consensus 53 ~~~~~~~~~~~~~~~~~I~G~~~~~~~~~~~~v~~P~tg~~i~~v~~~~~~~v~~av~~A~~A~~~~~w~~~~~~~R~~i 132 (493)
++--++....+..+++||||+|+.+. .+++++||+||+++++++.++.+|+++++++|++||+. .|+++|..+|.++
T Consensus 6 ~~~~~~~~~~~~~~~~~i~g~~~~~~--~~~~v~nP~tg~~i~~~~~~~~~~v~~av~~A~~A~~~-~w~~~~~~~R~~~ 82 (501)
T 1uxt_A 6 LEGVIKEKGGVPVYPSYLAGEWGGSG--QEIEVKSPIDLATIAKVISPSREEVERTLDVLFKRGRW-SARDMPGTERLAV 82 (501)
T ss_dssp GTTTSEEETTEEEECEECSSSEECCS--CEEEEECTTTCCEEEEEECCCHHHHHHHHHHHHHTHHH-HHHTSCHHHHHHH
T ss_pred HHHHHHHhcCCcccceeECCEEecCC--CeEEEECCCCCCEEEEEeCCCHHHHHHHHHHHHHHhhh-hhccCCHHHHHHH
Confidence 34444445555567899999999753 78999999999999999999999999999999999862 4999999999999
Q ss_pred HHHHHHHHHHhHHHHHHHHHHHcCCChhhhhhccHHHHHHHHHHHHHhhHHhcCccCCC---CC--CceeEEEeeeeeeE
Q 011130 133 ILRFADLLERHNDEIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADKIQGLTAPA---DG--PYHVQTLHEPIGVA 207 (493)
Q Consensus 133 L~~la~~l~~~~~ela~~~~~e~Gk~~~~a~~~Ev~~~~~~l~~~a~~~~~~~~~~~~~---~~--~~~~~~~~~PlGVv 207 (493)
|++++++|++|.++|++++++|+|||+.++. .|+..+++.++|++++++++.+...+. .. ....++.++|+|||
T Consensus 83 L~~~a~~l~~~~~ela~~~~~e~Gk~~~ea~-~Ev~~~~~~l~~~a~~~~~~~g~~~~~~~~~~~~~~~~~~~~~P~GVv 161 (501)
T 1uxt_A 83 LRKAADIIERNLDVFAEVLVMNAGKPKSAAV-GEVKAAVDRLRLAELDLKKIGGDYIPGDWTYDTLETEGLVRREPLGVV 161 (501)
T ss_dssp HHHHHHHHHHTHHHHHHHHHHHHCCCHHHHH-HHHHHHHHHHHTGGGGGGGTCCEEEESTTSSTTTTEEEEEEEEECSEE
T ss_pred HHHHHHHHHHhHHHHHHHHHHHhCCCHHHHH-HHHHHHHHHHHHHHHHHHHhcCccccccccCCCcCceEEEEEeeccEE
Confidence 9999999999999999999999999999998 599999999999999998876654443 22 33678999999999
Q ss_pred -----------------------------------------------------eEEEeeeCCccchhhhhhccccccEEE
Q 011130 208 -----------------------------------------------------GVLNIVSGYGPTAGAALASHMEVDKLA 234 (493)
Q Consensus 208 -----------------------------------------------------gvv~vv~~~~~~~~~~L~~~~~v~~v~ 234 (493)
|++|+|++.+ ++++.|+.||+||+|+
T Consensus 162 ~~I~PwN~P~~~~~~~~~~ALaaGN~VVlKps~~tp~t~~~l~~l~~eaGlP~gvv~vv~g~~-~~g~~L~~~~~vd~I~ 240 (501)
T 1uxt_A 162 AAITPFNYPLFDAVNKITYSFIYGNAVVVKPSISDPLPAAMAVKALLDAGFPPDAIALLNLPG-KEAEKIVADDRVAAVS 240 (501)
T ss_dssp EEECCTTSTTHHHHHHHHHHHHTTCEEEEECCTTSCHHHHHHHHHHHHTTCCTTSEEECCCCH-HHHHHHHTCTTCCEEE
T ss_pred EEECCCccHHHHHHHHHHHHHHcCCEEEEeCCCCchHHHHHHHHHHHHhCCCcCeEEEEeCCc-HHHHHHHhCCCcCEEE
Confidence 8999999977 8899999999999999
Q ss_pred EecCcHHHHHHHHHHhhcCCCceeEecCCCCceEEccCCCHHHHHHHHHHHHHhhcCCcccCCCeeEecchhHHHHHHHH
Q 011130 235 FTGSTTTGKIVLQLAAKSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFVEKA 314 (493)
Q Consensus 235 fTGs~~~g~~v~~~a~~~~~~pv~lelgG~~p~iV~~daDl~~aa~~i~~~~~~~~GQ~C~a~~~v~V~~~i~d~f~~~l 314 (493)
||||+.+|+.|++.++ +||+++|||||||+||++|||++.|++.+++++|.|+||.|++++|||||++++|+|+++|
T Consensus 241 FTGS~~~G~~i~~~aa---l~~v~lELGGk~p~iV~~dADl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~i~d~f~~~l 317 (501)
T 1uxt_A 241 FTGSTEVGERVVKVGG---VKQYVMELGGGDPAIVLEDADLDLAADKIARGIYSYAGQRCDAIKLVLAERPVYGKLVEEV 317 (501)
T ss_dssp EESCHHHHHHHHHHHC---SSEEEEECCCCEEEEECTTSCHHHHHHHHHHHHHGGGGCSTTCEEEEEEEHHHHHHHHHHH
T ss_pred EeCcHHHHHHHHHhcC---CCeEEEEcCCcCeEEECCCCCHHHHHHHHHHHHhcCCCCCCcCCcEEEeccchHHHHHHHH
Confidence 9999999999999876 7999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHhhcccCCCCCCCCccccCCCHHHHHHHHHHHHHHHhCCCEEEeCCcccCCCC-ceeeceEEecCC---CCcccccc
Q 011130 315 NALAMKRVVGDPFKGGIQQGPQIDSEQFEKILKYIRSGVDGGAKLETGGERLGAKG-YYIKPTVFTGVK---DDMLIAKD 390 (493)
Q Consensus 315 ~~~~~~~~vg~p~~~~~~~gpli~~~~~~~~~~~i~~a~~~ga~v~~gg~~~~~~g-~~~~Ptvl~~~~---~~~~i~~~ 390 (493)
+++++++++|||.|+++++||++++.+++++.++|++++++|+++++||.. .| +|++|||+.+++ ++|++++|
T Consensus 318 ~~~~~~~~~g~p~~~~~~~Gpli~~~~~~rv~~~i~~a~~~Ga~~~~gG~~---~g~~~~~Ptvl~~v~~~~~~~~i~~e 394 (501)
T 1uxt_A 318 AKRLSSLRVGDPRDPTVDVGPLISPSAVDEMMAAIEDAVEKGGRVLAGGRR---LGPTYVQPTFVEAPADRVKDMVLYKR 394 (501)
T ss_dssp HHHHHTCCBSCTTSTTCSBCCCSCHHHHHHHHHHHHHHHHTTCEEEECCCB---CSSSCBCCEEEECCHHHHTTSHHHHS
T ss_pred HHHHHhccCCCccccCCcccCCCCHHHHHHHHHHHHHHHHCCCEEEeCCcc---CCCceECCEEEeCCCCCCCcCHHHhC
Confidence 999999999999999999999999999999999999999999999999975 58 999999999999 99999999
Q ss_pred ccccceEEEEEeCCHHHHHHHHHcCCCCcEEEEecCCHHHHHHHHHhcceeEEEECCc-CCCCCCCCccCCCCCCCCCcc
Q 011130 391 EIFGPVQSILKYKDLDEVIQRSNASQYGLAAGVFTHNLDTANTLMRALRVGSVWINCF-DVFDAAIPFGGYKQSGQGREK 469 (493)
Q Consensus 391 E~fgPvl~v~~~~~~~eai~~~n~~~~gl~a~v~t~d~~~~~~~~~~l~~g~V~VN~~-~~~~~~~pfGG~~~SG~G~~~ 469 (493)
|+||||++|++|+|+||||+++|+++|||+++|||+|.+.++++++++++|+|+||++ ....+.+||||+|+||+|+++
T Consensus 395 EiFGPVl~v~~~~~~deAi~~aN~~~~gL~a~v~t~d~~~a~~~~~~l~~G~V~iN~~~~~~~~~~PfGG~k~SG~G~~~ 474 (501)
T 1uxt_A 395 EVFAPVALAVEVKDLDQAIELANGRPYGLDAAVFGRDVVKIRRAVRLLEVGAIYINDMPRHGIGYYPFGGRKKSGVFREG 474 (501)
T ss_dssp CCCSSEEEEEEESSHHHHHHHHHTSSEESEEEEECCCHHHHHHHHHHCCSSEEEETSCCCCTTSSSCBCCEETTEESCBS
T ss_pred cccCceEEEEeeCCHHHHHHHHhcCCCCcEEEEeCCCHHHHHHHHHhCCEeeEEEeCCCCCCCCCCCCCCcCCCCCCccC
Confidence 9999999999999999999999999999999999999999999999999999999997 566789999999999999999
Q ss_pred hHHHHHhhhhceEEEEeC-CCCCC
Q 011130 470 GSYSLSNYLQVKAVVTAL-KNPAW 492 (493)
Q Consensus 470 g~~~l~~~~~~k~v~~~~-~~~~~ 492 (493)
|.+++++|++.|+|++.+ ..+.|
T Consensus 475 G~~~l~~f~~~k~v~~~~~~~~~~ 498 (501)
T 1uxt_A 475 IGYAVEAVTAYKTIVFNYKGKGVW 498 (501)
T ss_dssp TTTTHHHHEEEEEEEEECTTSSSS
T ss_pred hHHHHHHhCceeEEEEecCCCccc
Confidence 999999999999999876 33444
No 35
>1uzb_A 1-pyrroline-5-carboxylate dehydrogenase; oxidoreductase, riken structural genomics/proteomics initiative, RSGI, structural genomics; 1.4A {Thermus thermophilus} SCOP: c.82.1.1 PDB: 2eiw_A 2bhq_A* 2bhp_A* 2bja_A* 2bjk_A* 2ehq_A* 2ehu_A* 2eii_A* 2eit_A* 2ej6_A 2ejd_A* 2ejl_A 2iy6_A* 2j40_A* 2j5n_A*
Probab=100.00 E-value=3.3e-85 Score=693.73 Aligned_cols=413 Identities=32% Similarity=0.522 Sum_probs=387.3
Q ss_pred ccceeCCEeeeCCCCCeeeeecCC-CCCeEEEEecCCHHHHHHHHHHHHHHccCCCCCCCCHHHHHHHHHHHHHHHHHhH
Q 011130 66 TQLLINGQFVDSASGKTFPTLDPR-TGDVITHVAEGEAEDVNRAVSAARKAFDEGPWPRMTAYERSKIILRFADLLERHN 144 (493)
Q Consensus 66 ~~~~I~G~~~~~~~~~~~~v~~P~-tg~~i~~v~~~~~~~v~~av~~A~~A~~~~~w~~~~~~~R~~iL~~la~~l~~~~ 144 (493)
+++||||+|+. ++.+++++||+ ||+++++++.++.+|+++++++|++||+ .|+.+|..+|.++|++++++|++|.
T Consensus 38 ~~~~i~G~~~~--~~~~~~~~nP~~t~~~i~~~~~~~~~~v~~av~aA~~A~~--~w~~~~~~~R~~~L~~~a~~l~~~~ 113 (516)
T 1uzb_A 38 YPLYIGGEWVD--TKERMVSLNPSAPSEVVGTTAKAGKAEAEAALEAAWKAFK--TWKDWPQEDRSRLLLKAAALMRRRK 113 (516)
T ss_dssp ECEEETTEEEC--CSSEEEEEETTEEEEEEEEEECCCHHHHHHHHHHHHHHHH--HHTTSCHHHHHHHHHHHHHHHHHTH
T ss_pred cceeECCEEec--CCCeEEEECCCCCCcEEEEEeCCCHHHHHHHHHHHHHHHH--HhccCCHHHHHHHHHHHHHHHHHHH
Confidence 47899999996 46789999999 6999999999999999999999999999 9999999999999999999999999
Q ss_pred HHHHHHHHHHcCCChhhhhhccHHHHHHHHHHHHHhhHHhcCccCC--CCCCceeEEEeeeeeeE---------------
Q 011130 145 DEIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADKIQGLTAP--ADGPYHVQTLHEPIGVA--------------- 207 (493)
Q Consensus 145 ~ela~~~~~e~Gk~~~~a~~~Ev~~~~~~l~~~a~~~~~~~~~~~~--~~~~~~~~~~~~PlGVv--------------- 207 (493)
++|++++++|+|||+.+++ .|+..+++.++|++++++++.+...+ ...+...++.++|+|||
T Consensus 114 ~ela~~~~~e~Gk~~~ea~-~ev~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~PwN~P~~~~~~ 192 (516)
T 1uzb_A 114 RELEATLVYEVGKNWVEAS-ADVAEAIDFIEYYARAALRYRYPAVEVVPYPGEDNESFYVPLGAGVVIAPWNFPVAIFTG 192 (516)
T ss_dssp HHHHHHHHHHHCCCHHHHH-HHHHHHHHHHHHHHHHHGGGCSSCCCCCCCTTEEEEEEEEECCEEEEECCSSSTTHHHHH
T ss_pred HHHHHHHHHHhCCCHHHHH-HHHHHHHHHHHHHHHHHHHhcCCcccccCCCCceEEEEEeccceEEEECCCccHHHHHHH
Confidence 9999999999999999998 49999999999999999888775432 22345678899999999
Q ss_pred --------------------------------------eEEEeeeCCccchhhhhhccccccEEEEecCcHHHHHHHHHH
Q 011130 208 --------------------------------------GVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLA 249 (493)
Q Consensus 208 --------------------------------------gvv~vv~~~~~~~~~~L~~~~~v~~v~fTGs~~~g~~v~~~a 249 (493)
|++|+|+|.+.++++.|+.||+||+|+||||+.+|+.|++.+
T Consensus 193 ~~a~ALaaGN~VVlKps~~tp~ta~~l~~l~~eaGlP~gvv~vv~g~~~~~~~~L~~~~~v~~I~FTGS~~~G~~i~~~a 272 (516)
T 1uzb_A 193 MIVGPVAVGNTVIAKPAEDAVVVGAKVFEIFHEAGFPPGVVNFLPGVGEEVGAYLVEHPRIRFINFTGSLEVGLKIYEAA 272 (516)
T ss_dssp HHHHHHHTTCEEEEECCGGGHHHHHHHHHHHHHHTCCTTSEEECCCSSSHHHHHHHTCTTCCEEEEESCHHHHHHHHHHH
T ss_pred HHHHHHHcCCeEEEeCCCCCHHHHHHHHHHHHHhCCCcCeEEEEeCCCchhhhhhhcCCCcCEEEecCCHHHHHHHHHHh
Confidence 899999998888899999999999999999999999999998
Q ss_pred h------hcCCCceeEecCCCCceEEccCCCHHHHHHHHHHHHHhhcCCcccCCCeeEecchhHHHHHHHHHHHHhhccc
Q 011130 250 A------KSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMKRVV 323 (493)
Q Consensus 250 ~------~~~~~pv~lelgG~~p~iV~~daDl~~aa~~i~~~~~~~~GQ~C~a~~~v~V~~~i~d~f~~~l~~~~~~~~v 323 (493)
+ + ++||+++|||||||+||++|||++.|++.+++++|.|+||.|++++|||||++++|+|+++|+++++++++
T Consensus 273 a~~~~~~~-~~~~v~lElGGk~p~iV~~dADl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~~ 351 (516)
T 1uzb_A 273 GRLAPGQT-WFKRAYVETGGKNAIIVDETADFDLAAEGVVVSAYGFQGQKCSAASRLILTQGAYEPVLERVLKRAERLSV 351 (516)
T ss_dssp TSCCTTCC-SCCEEEEECCCCEEEEECTTSCHHHHHHHHHHHHHGGGGCSTTCEEEEEEEHHHHHHHHHHHHHHHTTCCB
T ss_pred hhcccccc-ccceeEEecCCccceeECCCCCHHHHHHHHHHHHHhCCCCccccCcEEEEchHHHHHHHHHHHHHHHhccC
Confidence 8 5 89999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCCCCccccCCCHHHHHHHHHHHHHHHhCCCEEEeCCcccCCCCceeeceEEecCCCCccccccccccceEEEEEeC
Q 011130 324 GDPFKGGIQQGPQIDSEQFEKILKYIRSGVDGGAKLETGGERLGAKGYYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYK 403 (493)
Q Consensus 324 g~p~~~~~~~gpli~~~~~~~~~~~i~~a~~~ga~v~~gg~~~~~~g~~~~Ptvl~~~~~~~~i~~~E~fgPvl~v~~~~ 403 (493)
||| ++++++|||+++.+++++.++|++++++| ++++||...+..|+|++|||+.+++++|++++||+||||++|++|+
T Consensus 352 G~p-~~~~~~Gpli~~~~~~~v~~~i~~a~~~G-~v~~gg~~~~~~g~~~~Ptvl~~v~~~~~i~~eEiFGPVl~v~~~~ 429 (516)
T 1uzb_A 352 GPA-EENPDLGPVVSAEQERKVLSYIEIGKNEG-QLVLGGKRLEGEGYFIAPTVFTEVPPKARIAQEEIFGPVLSVIRVK 429 (516)
T ss_dssp SCG-GGCCSBCCCSCHHHHHHHHHHHHHHTTTS-EEEECCSBCSSSSCCBCCEEEESCCTTSGGGTSCCCSSEEEEEEES
T ss_pred CCC-ccccccCCCCCHHHHHHHHHHHHHHHHCC-CEEECCccCCCCCcEECCEEEECCCCCCHhhhccccCceEEEEEeC
Confidence 999 99999999999999999999999999998 8999997533469999999999999999999999999999999999
Q ss_pred CHHHHHHHHHcCCCCcEEEEecCCHHHHHHHHHhcceeEEEECCcCC--CCCCCCccCCCCCCCC-CcchHHHHHhhhhc
Q 011130 404 DLDEVIQRSNASQYGLAAGVFTHNLDTANTLMRALRVGSVWINCFDV--FDAAIPFGGYKQSGQG-REKGSYSLSNYLQV 480 (493)
Q Consensus 404 ~~~eai~~~n~~~~gl~a~v~t~d~~~~~~~~~~l~~g~V~VN~~~~--~~~~~pfGG~~~SG~G-~~~g~~~l~~~~~~ 480 (493)
|+||||+++|+++|||+++|||+|.+.++++++++++|+|+||++.. ..+.+||||+|.||+| +++|.+++++|++.
T Consensus 430 ~~~eAi~~aN~~~~gL~a~v~t~d~~~a~~~~~~l~aG~v~iN~~~~~~~~~~~PfGG~k~SG~G~~~~g~~~l~~f~~~ 509 (516)
T 1uzb_A 430 DFAEALEVANDTPYGLTGGVYSRKREHLEWARREFHVGNLYFNRKITGALVGVQPFGGFKLSGTNAKTGALDYLRLFLEM 509 (516)
T ss_dssp SHHHHHHHHHCSSCCSEEEEECSCHHHHHHHHHHSCCSEEEESSCSCCCCTTTSCBCCSGGGBSCCCBTSHHHHHTTEEE
T ss_pred CHHHHHHHHhcCCCCceEEEECCCHHHHHHHHHhCCEeEEEEeCCCCCCCCCCCCCCCcCcCCCCCccchHHHHHHcCCe
Confidence 99999999999999999999999999999999999999999998644 3578999999999999 58999999999999
Q ss_pred eEEEEe
Q 011130 481 KAVVTA 486 (493)
Q Consensus 481 k~v~~~ 486 (493)
|+|+++
T Consensus 510 k~v~~~ 515 (516)
T 1uzb_A 510 KAVAER 515 (516)
T ss_dssp EEEEEE
T ss_pred eEEEec
Confidence 999875
No 36
>4e3x_A Delta-1-pyrroline-5-carboxylate dehydrogenase, mitochondrial; amino acid metabolism, proline inhibition, oxidoreductase; HET: 16P PGE; 1.24A {Mus musculus} PDB: 3v9k_A* 3v9l_A* 3v9j_A* 3v9g_A 3v9h_A 3v9i_A
Probab=100.00 E-value=1.4e-85 Score=699.58 Aligned_cols=423 Identities=25% Similarity=0.361 Sum_probs=391.3
Q ss_pred ccccceeCCEeeeCCCCCeeeeecCCC-CCeEEEEecCCHHHHHHHHHHHHHHccCCCCCCCCHHHHHHHHHHHHHHHHH
Q 011130 64 DYTQLLINGQFVDSASGKTFPTLDPRT-GDVITHVAEGEAEDVNRAVSAARKAFDEGPWPRMTAYERSKIILRFADLLER 142 (493)
Q Consensus 64 ~~~~~~I~G~~~~~~~~~~~~v~~P~t-g~~i~~v~~~~~~~v~~av~~A~~A~~~~~w~~~~~~~R~~iL~~la~~l~~ 142 (493)
..+++||||+|+.+ +..+.++||.| |++|++++.++.+|+++||++|++||+ .|++++..+|.++|++++++|++
T Consensus 62 ~~~~~~I~G~~~~~--~~~~~~~~P~~~~~~i~~~~~a~~~dv~~Av~aA~~A~~--~W~~~~~~~R~~iL~~~a~~l~~ 137 (563)
T 4e3x_A 62 EAIPCVVGDEEVWT--SDIQYQLSPFNHAHKVAKFCYADKALLNRAIDAALAARK--EWDLKPMADRAQVFLKAADMLSG 137 (563)
T ss_dssp EECCEEETTEEECC--SCEEEEEETTEEEEEEEEEECCCHHHHHHHHHHHHHHHH--HHHHSCHHHHHHHHHHHHHHHHT
T ss_pred ccCCeEECCEEeec--CCceeeeCCCCCCcEEEEEeCCCHHHHHHHHHHHHHHHH--HHhcCCHHHHHHHHHHHHHHHHh
Confidence 45789999999974 35678999998 899999999999999999999999999 99999999999999999999999
Q ss_pred h-HHHHHHHHHHHcCCChhhhhhccHHHHHHHHHHHHHhhHHhcCccCCCC-CCceeEEEeeeeeeE-------------
Q 011130 143 H-NDEIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADKIQGLTAPAD-GPYHVQTLHEPIGVA------------- 207 (493)
Q Consensus 143 ~-~~ela~~~~~e~Gk~~~~a~~~Ev~~~~~~l~~~a~~~~~~~~~~~~~~-~~~~~~~~~~PlGVv------------- 207 (493)
+ +++|++++++|+|||+.++...|+..+++.++|++.+++++.+...... .....+.++.|+|||
T Consensus 138 ~~~~el~~~~~~e~Gk~~~ea~~e~v~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~r~p~GVV~~I~PwNfP~~~~ 217 (563)
T 4e3x_A 138 PRRAEVLAKTMVGQGKTVIQAEIDAAAELIDFFRFNAKFAVELEGEQPISVPPSTNHTVYRGLEGFVAAISPFNFTAIGG 217 (563)
T ss_dssp TTHHHHHHHHHHHHCCCHHHHHHHTTHHHHHHHHHHHHHHHHHTTCCCCCCTTEEEEEECCBCSSEEEEECCSSCHHHHH
T ss_pred ccHHHHHHHHHHHcCCCHHHHhHHHHHHHHHHHHHHHHHHHHhhCCCccCCCCCcceEEEecCceEEEEECCchHHHHHH
Confidence 8 9999999999999999999864499999999999999988877543222 234456677888998
Q ss_pred ---------------------------------------eEEEeeeCCccchhhhhhccccccEEEEecCcHHHHHHHHH
Q 011130 208 ---------------------------------------GVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQL 248 (493)
Q Consensus 208 ---------------------------------------gvv~vv~~~~~~~~~~L~~~~~v~~v~fTGs~~~g~~v~~~ 248 (493)
|+||+|++.+.++++.|+.||+|++|.||||+.+|+.|++.
T Consensus 218 ~~~~apALaGNtVVlKPs~~tp~sa~~l~~ll~eAGlP~Gvvnvv~g~g~~~g~~L~~hp~v~~I~FTGSt~vG~~i~~~ 297 (563)
T 4e3x_A 218 NLAGAPALMGNVVLWKPSDTAMLASYAVYRILREAGLPPNIIQFVPADGPTFGDTVTSSEHLCGINFTGSVPTFKHLWRQ 297 (563)
T ss_dssp HHHHHHHHTTCCEEEECCGGGHHHHHHHHHHHHHTTCCTTSEEECCCCHHHHHHHHTTCTTEEEEEEESCHHHHHHHHHH
T ss_pred HHHHHHhhcCCEEEEECCCCChHHHHHHHHHHHHhCCCCCeEEEEeCCcHHHHHHHHhCCCcCEEEEECCHHHHHHHHHH
Confidence 89999999888899999999999999999999999999999
Q ss_pred HhhcCCCc------eeEecCCCCceEEccCCCHHHHHHHHHHHHHhhcCCcccCCCeeEecchhHHHHHHHHHHHHhhcc
Q 011130 249 AAKSNLKP------VTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMKRV 322 (493)
Q Consensus 249 a~~~~~~p------v~lelgG~~p~iV~~daDl~~aa~~i~~~~~~~~GQ~C~a~~~v~V~~~i~d~f~~~l~~~~~~~~ 322 (493)
+++ ++|| +++|||||||+||++|||+|.|++.+++++|.|+||.|++++|||||+++||+|+++|++++++++
T Consensus 298 aa~-~lk~~~~~prv~lElGGk~p~IV~~dADld~Aa~~iv~~~f~~~GQ~C~A~~rv~V~~si~d~f~~~l~~~~~~l~ 376 (563)
T 4e3x_A 298 VAQ-NLDRFRTFPRLAGECGGKNFHFVHSSADVDSVVSGTLRSAFEYGGQKCSACSRLYVPKSLWPQIKGRLLEEHSRIK 376 (563)
T ss_dssp HHH-TTTTCSSCCEEEEECCCCEEEEECTTSCHHHHHHHHHHHHHGGGGCSTTCEEEEEEEGGGHHHHHHHHHHHHHTCC
T ss_pred HHh-hCCccccCCceeccCCCCCceeeCCCCCHHHHHHHHHHHHHhcCCCCCcCCcEEEEecchHHHHHHHHHHHHHhcc
Confidence 998 7874 999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cCCC-CCCCCccccCCCHHHHHHHHHHHHHHHh-CCCEEEeCCcccCCCCceeeceEEecCCCCccccccccccceEEEE
Q 011130 323 VGDP-FKGGIQQGPQIDSEQFEKILKYIRSGVD-GGAKLETGGERLGAKGYYIKPTVFTGVKDDMLIAKDEIFGPVQSIL 400 (493)
Q Consensus 323 vg~p-~~~~~~~gpli~~~~~~~~~~~i~~a~~-~ga~v~~gg~~~~~~g~~~~Ptvl~~~~~~~~i~~~E~fgPvl~v~ 400 (493)
+||| .|+++++||++++.+++++.++|+++++ .|+++++||...+..|+|++|||+.+++++|++++||+||||++|+
T Consensus 377 vGdp~~d~~~~~Gpli~~~~~~rv~~~i~~a~~~~ga~v~~GG~~~~~~G~fv~PTvl~~v~~~~~i~~eEiFGPVl~V~ 456 (563)
T 4e3x_A 377 VGDPAEDFGTFFSAVIDAKAFARIKKWLEHARSSPSLSILAGGQCNESVGYYVEPCIIESKDPQEPIMKEEIFGPVLTVY 456 (563)
T ss_dssp BSCTTTCTTCSBCCCSCHHHHHHHHHHHHHHHHCTTEEEEECCCEECSSSCEECCEEEEESCTTCGGGTSCCCSSEEEEE
T ss_pred CCCcccCcCCccCCCcCHHHHHHHHHHHHHHhhcCCCEEEeCCccCCCCCcEecCEEEecCCCCChhhcCCCcCeEEEEE
Confidence 9999 9999999999999999999999999996 8999999998766689999999999999999999999999999999
Q ss_pred EeCC--HHHHHHHH-HcCCCCcEEEEecCCHHHHHHHHHhcc--eeEEEECCcCCC--CCCCCccCCCCCCCC-CcchHH
Q 011130 401 KYKD--LDEVIQRS-NASQYGLAAGVFTHNLDTANTLMRALR--VGSVWINCFDVF--DAAIPFGGYKQSGQG-REKGSY 472 (493)
Q Consensus 401 ~~~~--~~eai~~~-n~~~~gl~a~v~t~d~~~~~~~~~~l~--~g~V~VN~~~~~--~~~~pfGG~~~SG~G-~~~g~~ 472 (493)
+|+| +||||+++ |+++|||+++|||+|.+.+++++++++ +|+||||+.++. .+.+||||+|.||+| +++|++
T Consensus 457 ~~~d~~~deAi~~ann~s~yGLta~V~t~d~~~~~~~~~~l~~~aG~v~IN~~~~~~~~~~~PFGG~k~SG~g~~~~G~~ 536 (563)
T 4e3x_A 457 VYPDDKYRETLKLVDSTTSYGLTGAVFAQDKAIVQEATRMLRNAAGNFYINDKSTGSVVGQQPFGGARASGTNDKPGGPH 536 (563)
T ss_dssp EECGGGHHHHHHHHHHSSSEESEEEEECSCHHHHHHHHHHTTTTCSEEEESSCSCCCCTTTSCCCCEETTBCCCCTTSTT
T ss_pred EECCCCHHHHHHHHHcCCCCCCEEEEEeCCHHHHHHHHHhhhcCeeEEEEcCCCCCCCcCCCCCCCccccCCCCccCCHH
Confidence 9997 79999999 789999999999999999999999976 999999997643 578999999999998 899999
Q ss_pred HHHhhhhceEEEEeCCCCC
Q 011130 473 SLSNYLQVKAVVTALKNPA 491 (493)
Q Consensus 473 ~l~~~~~~k~v~~~~~~~~ 491 (493)
+|++|++.|+|...+..|.
T Consensus 537 ~l~~~~~~k~v~~~~~~~~ 555 (563)
T 4e3x_A 537 YILRWTSPQVIKETHKPLG 555 (563)
T ss_dssp GGGGGBCCEEEEEECSCCC
T ss_pred HHHHhCceEEEEEeCcCCC
Confidence 9999999999999875443
No 37
>3etf_A Putative succinate-semialdehyde dehydrogenase; center for ST genomics of infectious diseases, oxidoreductase, csgid; 1.85A {Salmonella typhimurium} PDB: 3efv_A
Probab=100.00 E-value=2.8e-84 Score=679.69 Aligned_cols=404 Identities=29% Similarity=0.467 Sum_probs=383.9
Q ss_pred CCCeeeeecCCCCCeEEEEecCCHHHHHHHHHHHHHHccCCCCCCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCC
Q 011130 79 SGKTFPTLDPRTGDVITHVAEGEAEDVNRAVSAARKAFDEGPWPRMTAYERSKIILRFADLLERHNDEIAALETWDNGKP 158 (493)
Q Consensus 79 ~~~~~~v~~P~tg~~i~~v~~~~~~~v~~av~~A~~A~~~~~w~~~~~~~R~~iL~~la~~l~~~~~ela~~~~~e~Gk~ 158 (493)
+..+++++||+||++|++++.++.+|+++++++|++||+ .|++++..+|.++|++++++|+++.++|++++++|+|||
T Consensus 5 s~~~~~~~~P~t~~~i~~~~~~~~~~v~~av~~A~~A~~--~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~ 82 (462)
T 3etf_A 5 TATQALSVNPATGQTLAAMPWANAQEIEHALSLAASGFK--KWKMTSVAQRAQTLRDIGQALRAHAEEMAQCITREMGKP 82 (462)
T ss_dssp -CCCSEEECTTTCCEEEECCCCCHHHHHHHHHHHHHHHH--HHTTSCHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHCCC
T ss_pred ccCccceECCCCCCEEEEecCCCHHHHHHHHHHHHHHHH--HhhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCC
Confidence 567799999999999999999999999999999999999 999999999999999999999999999999999999999
Q ss_pred hhhhhhccHHHHHHHHHHHHHhhHHhcCccCCCCCCceeEEEeeeeeeE-------------------------------
Q 011130 159 FEQSAQTEVPMTTRLFRYYAGWADKIQGLTAPADGPYHVQTLHEPIGVA------------------------------- 207 (493)
Q Consensus 159 ~~~a~~~Ev~~~~~~l~~~a~~~~~~~~~~~~~~~~~~~~~~~~PlGVv------------------------------- 207 (493)
..+++. |+..+++.++|++++.+++.+.......+...++.++|+|||
T Consensus 83 ~~~a~~-ev~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~PwN~P~~~~~~~~~~ALaaGN~VvlKp 161 (462)
T 3etf_A 83 IKQARA-EVTKSAALCDWYAEHGPAMLNPEPTLVENQQAVIEYRPLGVILAIMPWNFPLWQVLRGAVPILLAGNSYLLKH 161 (462)
T ss_dssp HHHHHH-HHHHHHHHHHHHHHHHHHHTSCEECSSGGGCEEEEEEECSEEEEECCSSSTTHHHHHHHHHHHHTTCEEEEEC
T ss_pred HHHHHH-HHHHHHHHHHHHHHhHHHhcCCcccCCCCceeEEEeecCcEEEEECCCchHHHHHHHHHHHHHhcCCEEEEEC
Confidence 999985 999999999999999888776553222345678999999999
Q ss_pred ----------------------eEEEeeeCCccchhhhhhccccccEEEEecCcHHHHHHHHHHhhcCCCceeEecCCCC
Q 011130 208 ----------------------GVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLAAKSNLKPVTLELGGKS 265 (493)
Q Consensus 208 ----------------------gvv~vv~~~~~~~~~~L~~~~~v~~v~fTGs~~~g~~v~~~a~~~~~~pv~lelgG~~ 265 (493)
|++|+|++ +.+.+..|+.||+|++|+||||+.+|+.|++.+++ ++||+++||||||
T Consensus 162 s~~tp~~~~~l~~~l~~aglP~gv~~vv~g-~~~~~~~l~~~~~v~~v~fTGS~~~g~~i~~~aa~-~~~~v~lElGGk~ 239 (462)
T 3etf_A 162 APNVTGCAQMIARILAEAGTPAGVYGWVNA-NNEGVSQMINDPRIAAVTVTGSVRAGAAIGAQAGA-ALKKCVLELGGSD 239 (462)
T ss_dssp CTTCHHHHHHHHHHHHHTTCCBTTEEECCC-CHHHHHHHHTSTTEEEEEEESCHHHHHHHHHHHHH-TTCCEEEECCCCE
T ss_pred CCCCcHHHHHHHHHHHHhCCCcCeEEEEEC-CHHHHHHHhcCCCCCEEEEeCCchHHHHHHHHHhc-cCCceEEEcCCCC
Confidence 89999998 56778899999999999999999999999999998 8999999999999
Q ss_pred ceEEccCCCHHHHHHHHHHHHHhhcCCcccCCCeeEecchhHHHHHHHHHHHHhhcccCCCCCCCCccccCCCHHHHHHH
Q 011130 266 PFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMKRVVGDPFKGGIQQGPQIDSEQFEKI 345 (493)
Q Consensus 266 p~iV~~daDl~~aa~~i~~~~~~~~GQ~C~a~~~v~V~~~i~d~f~~~l~~~~~~~~vg~p~~~~~~~gpli~~~~~~~~ 345 (493)
|+||++|||++.|++.+++++|+|+||.|+++++||||++++|+|+++|++++.++++|||.++++++||+++..+++++
T Consensus 240 p~iV~~dADl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~~G~p~~~~~~~gpli~~~~~~~v 319 (462)
T 3etf_A 240 PFIVLNDADLELAVKAAVAGRYQNTGQVCAAAKRFIVEEGIAQAFTDRFVAAAAALKMGDPLVEENDLGPMARFDLRDEL 319 (462)
T ss_dssp EEEECTTSCHHHHHHHHHHHHHGGGGCCTTCEEEEEEEHHHHHHHHHHHHHHHHHCCBSCTTSTTCSBCCCSCHHHHHHH
T ss_pred ccEECCCCCHHHHHHHHHHHHHhcCCCcccCCcEEEEehhHHHHHHHHHHHHHHhhcCCCCccccCcccCCCCHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHhCCCEEEeCCcccCCCCceeeceEEecCCCCccccccccccceEEEEEeCCHHHHHHHHHcCCCCcEEEEec
Q 011130 346 LKYIRSGVDGGAKLETGGERLGAKGYYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYKDLDEVIQRSNASQYGLAAGVFT 425 (493)
Q Consensus 346 ~~~i~~a~~~ga~v~~gg~~~~~~g~~~~Ptvl~~~~~~~~i~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~a~v~t 425 (493)
.++|++++++|+++++||...+..|+|++|||+.+++++|++++||+||||++|++|+|+||||+++|+++|||+++|||
T Consensus 320 ~~~i~~a~~~ga~~~~gg~~~~~~g~~~~Ptvl~~v~~~~~~~~eE~FGPVl~v~~~~~~deAi~~an~~~~gL~a~v~t 399 (462)
T 3etf_A 320 HQQVQASVAEGARLLLGGEKIAGEGNYYAATVLADVTPDMTAFRQELFGPVAAITVAKDAAHALALANDSEFGLSATIFT 399 (462)
T ss_dssp HHHHHHHHHTTCEEEECCSBCSSSSCCBCCEEEESCCTTSHHHHSCCCSSEEEEEEESSHHHHHHHHHCSSCCSCEEEEC
T ss_pred HHHHHHHHHCCCEEEeCCcccCCCCcEEeeEEEECCCCCChhhcCceeCcEEEEEEcCCHHHHHHHHhCCCCCceEEEEC
Confidence 99999999999999999986666899999999999999999999999999999999999999999999999999999999
Q ss_pred CCHHHHHHHHHhcceeEEEECCcCCCCCCCCccCCCCCCCCCcchHHHHHhhhhceEEEEeC
Q 011130 426 HNLDTANTLMRALRVGSVWINCFDVFDAAIPFGGYKQSGQGREKGSYSLSNYLQVKAVVTAL 487 (493)
Q Consensus 426 ~d~~~~~~~~~~l~~g~V~VN~~~~~~~~~pfGG~~~SG~G~~~g~~~l~~~~~~k~v~~~~ 487 (493)
+|.+.++++++++++|+||||++....+.+||||+|+||+|+++|.+++++|++.|+|+++.
T Consensus 400 ~d~~~a~~~~~~l~aG~v~vN~~~~~~~~~PfGG~k~SG~G~~~g~~g~~~~~~~k~v~~~r 461 (462)
T 3etf_A 400 ADDTLAAEMAARLECGGVFINGYSASDARVAFGGVKKSGFGRELSHFGLHEFCNVQTVWKNR 461 (462)
T ss_dssp SCHHHHHHHHHHCCSSEEEESSCCCCCTTSCBCCSGGGEECCBSHHHHHHTTEEEEEEEECC
T ss_pred CCHHHHHHHHHhCCcceEEECCCCCCCCCCCcCCcCCCCCCccchHHHHHHHhceeEEEEec
Confidence 99999999999999999999998877889999999999999999999999999999998753
No 38
>3ju8_A Succinylglutamic semialdehyde dehydrogenase; alpha-beta structure, structural genomics, PSI-2, protein ST initiative; HET: NAD; 1.82A {Pseudomonas aeruginosa}
Probab=100.00 E-value=1.8e-82 Score=669.37 Aligned_cols=408 Identities=29% Similarity=0.409 Sum_probs=382.6
Q ss_pred cceeCCEeeeCCCCCeeeeecCCCCCeEEEEecCCHHHHHHHHHHHHHHccCCCCCCCCHHHHHHHHHHHHHHHHHhHHH
Q 011130 67 QLLINGQFVDSASGKTFPTLDPRTGDVITHVAEGEAEDVNRAVSAARKAFDEGPWPRMTAYERSKIILRFADLLERHNDE 146 (493)
Q Consensus 67 ~~~I~G~~~~~~~~~~~~v~~P~tg~~i~~v~~~~~~~v~~av~~A~~A~~~~~w~~~~~~~R~~iL~~la~~l~~~~~e 146 (493)
++||||+|+.+ ++.++.++||+||+++++++.++.+|+++++++|++||+ .|+.++..+|.++|++++++|+++.++
T Consensus 7 ~~~I~G~~~~~-~~~~~~~~~P~tg~~~~~~~~~~~~~v~~av~~A~~A~~--~w~~~~~~~R~~~L~~~a~~l~~~~~e 83 (490)
T 3ju8_A 7 THYIAGQWLAG-QGETLESLDPVGQGVVWSGRGADATQVDAAVCAAREAFP--AWARRPLEQRIELLERFAATLKSRADE 83 (490)
T ss_dssp CEEETTEEECC-CSCEEEEECTTTCCEEEEEECCCHHHHHHHHHHHHHHHH--HHHHSCHHHHHHHHHHHHHHHHHTHHH
T ss_pred CceECCEEecC-CCCeEEEECCCCCCEEEEECCCCHHHHHHHHHHHHHHHH--HhccCCHHHHHHHHHHHHHHHHHHHHH
Confidence 78999999975 357899999999999999999999999999999999999 999999999999999999999999999
Q ss_pred HHHHHHHHcCCChhhhhhccHHHHHHHHHHHHHhhHHhcCccCCCCCCceeEEEeeeeeeE-------------------
Q 011130 147 IAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADKIQGLTAPADGPYHVQTLHEPIGVA------------------- 207 (493)
Q Consensus 147 la~~~~~e~Gk~~~~a~~~Ev~~~~~~l~~~a~~~~~~~~~~~~~~~~~~~~~~~~PlGVv------------------- 207 (493)
|++++++|+|||+.+++. |+..+++.++|++.+.+++.+...+...+...++.++|+|||
T Consensus 84 la~~~~~e~Gk~~~ea~~-ev~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~PwN~P~~~~~~~~~~ 162 (490)
T 3ju8_A 84 LARVIGEETGKPLWESAT-EVTSMVNKVAISVQAFRERTGEKSGPLADATAVLRHKPHGVVAVFGPYNFPGHLPNGHIVP 162 (490)
T ss_dssp HHHHHHHHHCCCHHHHHH-HHHHHHHHHHHHHHHHHHHSCCEEEEETTEEEEEEEEECSEEEEECCSSSTTHHHHHHHHH
T ss_pred HHHHHHHHhCCCHHHHHH-HHHHHHHHHHHHHHHHHHhcCCccccCCCCeeeEEECCCCEEEEECCCcchHHHHHHHHHH
Confidence 999999999999999985 999999999999998888776654322344567779999999
Q ss_pred ----------------------------------eEEEeeeCCccchhhhhhccccccEEEEecCcHHHHHHHHHHhhcC
Q 011130 208 ----------------------------------GVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLAAKSN 253 (493)
Q Consensus 208 ----------------------------------gvv~vv~~~~~~~~~~L~~~~~v~~v~fTGs~~~g~~v~~~a~~~~ 253 (493)
|++|+|++ +.+.++.|+.||+||+|+||||+.+|+.|++.+++ +
T Consensus 163 ALaaGN~VVlKps~~tp~t~~~l~~l~~~aGlP~gvv~vv~g-~~~~~~~L~~~~~v~~V~fTGS~~~g~~i~~~aa~-~ 240 (490)
T 3ju8_A 163 ALLAGNCVVFKPSELTPKVAELTLKAWIQAGLPAGVLNLVQG-GRETGVALAAHRGLDGLFFTGSSRTGNLLHSQFGG-Q 240 (490)
T ss_dssp HHHHTCEEEEECCTTCHHHHHHHHHHHHHTTCCTTTEEECCC-SHHHHHHHHTCTTCSEEEEESCHHHHHHHHHHTTT-C
T ss_pred HHHcCCeEEEECCCCCcHHHHHHHHHHHHhCcCcCeEEEEeC-CHHHHHHHHhCCCcCEEEEECcHHHHHHHHHHhhc-c
Confidence 89999998 67889999999999999999999999999999988 8
Q ss_pred CCce-eEecCCCCceEEccCCCHHHHHHHHHHHHHhhcCCcccCCCeeEecchh-HHHHHHHHHHHHhhcccCC-CCCCC
Q 011130 254 LKPV-TLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESV-YDQFVEKANALAMKRVVGD-PFKGG 330 (493)
Q Consensus 254 ~~pv-~lelgG~~p~iV~~daDl~~aa~~i~~~~~~~~GQ~C~a~~~v~V~~~i-~d~f~~~l~~~~~~~~vg~-p~~~~ 330 (493)
++|+ ++|||||||+||++|||+|.|++.+++++|.|+||.|++++++|||+++ +|+|+++|+++++++++|+ |.|++
T Consensus 241 ~~~v~~lElGGk~p~iV~~dADl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~~i~d~f~~~l~~~~~~~~~G~~~~~~~ 320 (490)
T 3ju8_A 241 PQKILALEMGGNNPLVVEEVADLDAAVYTIIQSAFISAGQRCTCARRLLVPQGAWGDALLARLVAVSATLRVGRFDEQPA 320 (490)
T ss_dssp TTSEEEEECCCCEEEEECCCSCHHHHHHHHHHHHHGGGGCSTTSEEEEEEESSHHHHHHHHHHHHHHHHCCBCCTTCSSC
T ss_pred CCCcEEeecCCCCeEEECCCCCHHHHHHHHHHHHHhcCCCCCcCCCEEEEECCccHHHHHHHHHHHHHhccCCCCCCCCc
Confidence 9998 8999999999999999999999999999999999999999999999996 9999999999999999999 99999
Q ss_pred CccccCCCHHHHHHHHHHHHHHHhCCCEEEeCCcccCCCCceeeceEEecCCCCccccccccccceEEEEEeCCHHHHHH
Q 011130 331 IQQGPQIDSEQFEKILKYIRSGVDGGAKLETGGERLGAKGYYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYKDLDEVIQ 410 (493)
Q Consensus 331 ~~~gpli~~~~~~~~~~~i~~a~~~ga~v~~gg~~~~~~g~~~~Ptvl~~~~~~~~i~~~E~fgPvl~v~~~~~~~eai~ 410 (493)
+++||+++..+++++.++|++++++|+++++||...+..|+|++|||+. ++++|++++||+||||++|++|+|+||||+
T Consensus 321 ~~~Gpli~~~~~~~v~~~i~~a~~~Ga~~~~gg~~~~~~g~~~~PTvl~-v~~~~~i~~eEiFGPVl~v~~~~~~~eAi~ 399 (490)
T 3ju8_A 321 PFMGAVISLSAAEHLLKAQEHLIGKGAQPLLAMTQPIDGAALLTPGILD-VSAVAERPDEEFFGPLLQVIRYSDFAAAIR 399 (490)
T ss_dssp CSBCCCSCHHHHHHHHHHHHHHHHTTCEEEECCCCCSTTSCCCCCEEEE-CTTCSSCCCCCCCSSEEEEEEESSHHHHHH
T ss_pred CccccccCHHHHHHHHHHHHHHHHCCCEEEECCCccCCCCCEEccEEEE-eCCCCccccccccccEEEEEEeCCHHHHHH
Confidence 9999999999999999999999999999999998666689999999999 999999999999999999999999999999
Q ss_pred HHHcCCCCcEEEEecCCHHHHHHHHHhcceeEEEECCcCC-CCCCCCccCCCCCCCCCcchHHHHHhhhhceEEEEeC
Q 011130 411 RSNASQYGLAAGVFTHNLDTANTLMRALRVGSVWINCFDV-FDAAIPFGGYKQSGQGREKGSYSLSNYLQVKAVVTAL 487 (493)
Q Consensus 411 ~~n~~~~gl~a~v~t~d~~~~~~~~~~l~~g~V~VN~~~~-~~~~~pfGG~~~SG~G~~~g~~~l~~~~~~k~v~~~~ 487 (493)
++|+++|||+++|||+|.++++++++++++|+|+||++.. ..+.+||||+|.||++ ++++|++.|+|++..
T Consensus 400 ~aN~~~~gL~a~v~t~d~~~a~~~~~~l~aG~v~vN~~~~~~~~~~PfGG~~~SG~~------~~~~~~~~k~v~~~~ 471 (490)
T 3ju8_A 400 EANATQYGLAAGLLSDSRERFEQFLVESRAGIVNWNKQLTGAASSAPFGGIGASGNH------RPSAYYAADYCAYPV 471 (490)
T ss_dssp HHHCSSCCSEEEEECSCHHHHHHHHHHCCSSEEEESSCSSCCCTTSEECCCGGGBSS------CCEETTHHHHHEEEE
T ss_pred HHhcCCCCceEEEEcCCHHHHHHHHHhcCcceEEECCCcCCCCCCCCcCCccccchh------HHHhhheeEEEEEec
Confidence 9999999999999999999999999999999999999765 3578999999999974 489999999988774
No 39
>4h7n_A Aldehyde dehydrogenase; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, ALDH_ddaldh, COG1012, glyco_hydro_97; 2.00A {Anabaena variabilis}
Probab=100.00 E-value=3.4e-82 Score=665.09 Aligned_cols=408 Identities=27% Similarity=0.411 Sum_probs=376.5
Q ss_pred CCCCeeeeecCCCCCeEEEEecCCHHHHHHHHHHHHHHccCCCCCCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCC
Q 011130 78 ASGKTFPTLDPRTGDVITHVAEGEAEDVNRAVSAARKAFDEGPWPRMTAYERSKIILRFADLLERHNDEIAALETWDNGK 157 (493)
Q Consensus 78 ~~~~~~~v~~P~tg~~i~~v~~~~~~~v~~av~~A~~A~~~~~w~~~~~~~R~~iL~~la~~l~~~~~ela~~~~~e~Gk 157 (493)
.+.++++++||+||+++++++.++.+|+++||++|++||+ .|+++|..+|.++|++++++|++|+++|++++++|+||
T Consensus 3 a~~~t~~v~nP~tg~~~~~~~~~~~~~v~~av~~A~~A~~--~W~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk 80 (474)
T 4h7n_A 3 AMTKTIEVRNPRTGKFDYVIIPPPPRLLAQQCNRARRAQS--RWQELGVEGRITTLQQWKQAILSRREQLTEALVNDTGR 80 (474)
T ss_dssp CCCCCEEEECTTTCSEEEEECCCCHHHHHHHHHHHHHHHH--HHHHTHHHHHHHHHHHHHHHHHTTHHHHHHHHHHHHSC
T ss_pred CCCCEEeeECCCCCCEEEEEcCCCHHHHHHHHHHHHHHHH--HHhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCC
Confidence 4678999999999999999999999999999999999999 99999999999999999999999999999999999999
Q ss_pred ChhhhhhccHHHHHHHHHHHHHhhHHhcCccC-CCC-CCceeEEEeeeeeeE----------------------------
Q 011130 158 PFEQSAQTEVPMTTRLFRYYAGWADKIQGLTA-PAD-GPYHVQTLHEPIGVA---------------------------- 207 (493)
Q Consensus 158 ~~~~a~~~Ev~~~~~~l~~~a~~~~~~~~~~~-~~~-~~~~~~~~~~PlGVv---------------------------- 207 (493)
+... . .|+..++..+++++.++.++..... +.. .....+..++|+|||
T Consensus 81 ~~~~-~-~ev~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~PwNfP~~~~~~~~~~ALaaGN~VV 158 (474)
T 4h7n_A 81 LSIT-V-LEIDSFLASIDRWCGLAPELLQTSAKNTSIPFIALQQSLVPYPLVGVISPWNFPLTLSMIDTIPALLAGCAVV 158 (474)
T ss_dssp SHHH-H-HHHHHHHHHHHHHHHHHHHHHCCEEEECSSTTEEEEEEEEECSEEEEEECSSSHHHHHHTTHHHHHHHTCEEE
T ss_pred cHHH-H-HHHHHHHHHHHHHHhhhhhcccccccCCCCCCccceEEEEeccEEEEECCCCcHHHHHhcccCcchhcCCcee
Confidence 8654 3 4999999999999988776554322 212 334566788999998
Q ss_pred -------------------------eEEEeeeCCccchhhhhhccccccEEEEecCcHHHHHHHHHHhhcCCCceeEecC
Q 011130 208 -------------------------GVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLAAKSNLKPVTLELG 262 (493)
Q Consensus 208 -------------------------gvv~vv~~~~~~~~~~L~~~~~v~~v~fTGs~~~g~~v~~~a~~~~~~pv~lelg 262 (493)
|++|+|++ +.+.+..|+.| +|+|+||||+.+|+.|++.+++ ++||+++|||
T Consensus 159 lKps~~tp~~~~~l~~~~~~ag~p~gv~~~v~g-~~~~~~~l~~~--v~~v~FTGS~~~G~~i~~~aa~-~~~~v~lElG 234 (474)
T 4h7n_A 159 VKPSEIAPRFVAPLLMALNTVPELRDVLIFVEG-GGETGANLINY--VDFVCFTGSVATGREVAETAAR-RFIPAYLELG 234 (474)
T ss_dssp EEECTTSCTTHHHHHHHHTTCTTTTTTEEECCC-CHHHHHHHHTT--CSEEEEESCHHHHHHHHHHHHH-HTCCEEEECC
T ss_pred ecccccCchHHHHHHhhhhhhcccccceeeccc-cchhhhhhhhc--cceEEeccccchhhhhhhhhhc-ccccccccCC
Confidence 89999998 56778888876 8999999999999999999998 8999999999
Q ss_pred CCCceEEccCCCHHHHHHHHHHHHHhhcCCcccCCCeeEecchhHHHHHHHHHHHHhhcccCCCCCCCCccccCCCHHHH
Q 011130 263 GKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMKRVVGDPFKGGIQQGPQIDSEQF 342 (493)
Q Consensus 263 G~~p~iV~~daDl~~aa~~i~~~~~~~~GQ~C~a~~~v~V~~~i~d~f~~~l~~~~~~~~vg~p~~~~~~~gpli~~~~~ 342 (493)
||||+||++|||++.|++.+++++|.|+||.|++++|||||++++|+|+++|++++.++++|+|.++++++||++++.++
T Consensus 235 Gk~p~iV~~dAdl~~aa~~i~~~~~~n~GQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~~~~g~p~~~~~~~gpli~~~~~ 314 (474)
T 4h7n_A 235 GKDPAIVLESANLELATSAILWGAVVNTGQSCLSIERIYVAESKFEEFYHQLIAKAHRLQLAYPLVEDGAIGPIIAEKQA 314 (474)
T ss_dssp CCEEEEECTTSCHHHHHHHHHHHHHGGGGCSTTCEEEEEEEGGGHHHHHHHHHHHHHHCCBCCSSGGGCSBCCCSSHHHH
T ss_pred CcCccccCchhhHHHHHHHHHhhhccCCCCceeecccccchHHHHHHHHHHHHHHhhccccCCCcccccccCccccHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHhCCCEEEeCCcccC-CCCceeeceEEecCCCCccccccccccceEEEEEeCCHHHHHHHHHcCCCCcEE
Q 011130 343 EKILKYIRSGVDGGAKLETGGERLG-AKGYYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYKDLDEVIQRSNASQYGLAA 421 (493)
Q Consensus 343 ~~~~~~i~~a~~~ga~v~~gg~~~~-~~g~~~~Ptvl~~~~~~~~i~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~a 421 (493)
+++.+++++++++|+++++||...+ ..|+|++|||+.+++++|++++||+||||++|++|+|+||||+++|+++|||++
T Consensus 315 ~~v~~~i~~a~~~ga~v~~Gg~~~~~~~g~~~~Ptv~~~v~~~~~i~~eEiFGPVl~v~~~~~~deAi~~aN~~~~GL~a 394 (474)
T 4h7n_A 315 GIINDHILDAVEKGAVIHCGGKVEELGGGWWCRPTVMTNVNHSMKVMTEETFGPIMPVMPFPDVEEAVYLANDTIYGLSA 394 (474)
T ss_dssp HHHHHHHHHHHHTTCEEEECCCCEEETTEEECCCEEEESCCTTSGGGTSCCCSSEEEEEEESSHHHHHHHHHCSSCCSEE
T ss_pred HHHHHHHHHHHhhCceeccCCcccccCCCcccCceeEEeeccccccccccccCcEEEEEEECCHHHHHHHHHcCCCCCeE
Confidence 9999999999999999999997543 468999999999999999999999999999999999999999999999999999
Q ss_pred EEecCCHHHHHHHHHhcceeEEEECCcCC--CCCCCCccCCCCCCCC-CcchHHHHHhhhhceEEEEeC---CCCCCC
Q 011130 422 GVFTHNLDTANTLMRALRVGSVWINCFDV--FDAAIPFGGYKQSGQG-REKGSYSLSNYLQVKAVVTAL---KNPAWL 493 (493)
Q Consensus 422 ~v~t~d~~~~~~~~~~l~~g~V~VN~~~~--~~~~~pfGG~~~SG~G-~~~g~~~l~~~~~~k~v~~~~---~~~~~~ 493 (493)
+|||+|.++++++++++++|+|+||++.. ..+..||||+|.||+| +++|.+++++|++.|+|+++. ..|-||
T Consensus 395 ~v~t~d~~~a~~~a~~l~aG~v~iN~~~~~~~~~~~pfgG~~~SG~G~~~~G~~g~~~f~~~k~v~~~~~~~~~p~w~ 472 (474)
T 4h7n_A 395 AVFAGSEDEALKVARQLNAGAISINDAALTAMMHEGEKNAFNFSGLGGSRVGAAGLKRFLRKQAFLIKTNSTSDPWWF 472 (474)
T ss_dssp EEECSSHHHHHHHHTTSCCSEEEESSSCGGGTCCCSCCCCCGGGEESCCSSTTHHHHTTEEEEEEEEECSSSCCTTSC
T ss_pred EEEeCCHHHHHHHHHhCCeeEEEECCCCccCCcCCCCCCCcCCCCCCCCcchHHHHHHhCeEEEEEECCCCCCCCCCc
Confidence 99999999999999999999999998654 3578999999999998 789999999999999999885 445565
No 40
>4f9i_A Proline dehydrogenase/delta-1-pyrroline-5-carboxy dehydrogenase; proline utilization A, PUTA, flavoenzyme, structural genomic biology; HET: FAD MES; 2.20A {Geobacter sulfurreducens}
Probab=100.00 E-value=2.1e-81 Score=701.82 Aligned_cols=417 Identities=30% Similarity=0.504 Sum_probs=392.3
Q ss_pred cccceeCCEeeeCCCCCeeeeecCCC-CCeEEEEecCCHHHHHHHHHHHHHHccCCCCCCCCHHHHHHHHHHHHHHHHHh
Q 011130 65 YTQLLINGQFVDSASGKTFPTLDPRT-GDVITHVAEGEAEDVNRAVSAARKAFDEGPWPRMTAYERSKIILRFADLLERH 143 (493)
Q Consensus 65 ~~~~~I~G~~~~~~~~~~~~v~~P~t-g~~i~~v~~~~~~~v~~av~~A~~A~~~~~w~~~~~~~R~~iL~~la~~l~~~ 143 (493)
..++||||+|+. ++++++++||+| ++++++++.++.+|+++||++|++||+ .|+.+|..+|.++|++++++|+++
T Consensus 531 ~~~~~I~G~~~~--~~~~~~v~nPa~~~~~i~~v~~a~~~dv~~Av~aA~~A~~--~W~~~~~~eRa~iL~~~Adll~~~ 606 (1026)
T 4f9i_A 531 TYPLFINGKEVR--TNDLIPTVNPNKPSEVLGQICQAGTTEVGDAIAAAKAAFP--AWRDTDPRTRAEYLLKAAQAARKR 606 (1026)
T ss_dssp EECEEETTEEEC--CSCEEEEEETTEEEEEEEEEECCCHHHHHHHHHHHHHHHH--HHHTSCHHHHHHHHHHHHHHHHHT
T ss_pred ccCceECCEEec--CCCcEEEeCCCCCCceEEEEeCCCHHHHHHHHHHHHHHHH--hcccCCHHHHHHHHHHHHHHHHHH
Confidence 468899999996 578999999998 999999999999999999999999999 999999999999999999999999
Q ss_pred HHHHHHHHHHHcCCChhhhhhccHHHHHHHHHHHHHhhHHhcCccCCC-CCCceeEEEeeeeeeE---------------
Q 011130 144 NDEIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADKIQGLTAPA-DGPYHVQTLHEPIGVA--------------- 207 (493)
Q Consensus 144 ~~ela~~~~~e~Gk~~~~a~~~Ev~~~~~~l~~~a~~~~~~~~~~~~~-~~~~~~~~~~~PlGVv--------------- 207 (493)
+++|++++++|+|||..++.. |+..+++.++||+.+++++.+...+. ..+...++.++|+|||
T Consensus 607 ~~eLa~~~~~E~GK~~~ea~~-Ev~~aid~lr~~a~~~~~~~~~~~~~~~~g~~~~~~~~PlGVV~~I~PwNfPl~i~~~ 685 (1026)
T 4f9i_A 607 LFELSAWQVLEIGKQWDQAYA-DVTEAIDFLEYYAREMIRLGQPQRVGHAPGELNHYFYEPKGVAAVIAPWNFPLAISMG 685 (1026)
T ss_dssp HHHHHHHHHHHTCCCHHHHHH-HHHHHHHHHHHHHHHHHHHTSCEEECCCTTEEEEEEEEECSEEEEECCSSSTTHHHHH
T ss_pred HHHHHHHHHHHhCCChhhHHH-HHHHHHHHHHHHHHHHHHhcCCccccCCCCccceeEeecCceEEEeCCCccHHHHHHH
Confidence 999999999999999999985 99999999999999998877654332 3455678899999999
Q ss_pred --------------------------------------eEEEeeeCCccchhhhhhccccccEEEEecCcHHHHHHHHHH
Q 011130 208 --------------------------------------GVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLA 249 (493)
Q Consensus 208 --------------------------------------gvv~vv~~~~~~~~~~L~~~~~v~~v~fTGs~~~g~~v~~~a 249 (493)
|++|+|+|.+.++++.|+.||+|++|+||||+.+|+.|++.+
T Consensus 686 ~~a~ALaaGNtVVlKPse~tplsa~~l~ell~eAGlP~gvvnvV~G~g~~vg~~L~~hp~v~~V~FTGSt~vg~~I~~~a 765 (1026)
T 4f9i_A 686 MASAAIVTGNCVVFKPSGITSIIGWHLVELFREAGLPEGVFNFTPGRGSVMGDYLVDHPDISLIAFTGSMETGLRIIERA 765 (1026)
T ss_dssp HHHHHHHTTCEEEEECCGGGHHHHHHHHHHHHHTTCCTTSEEECCCCHHHHHHHHHHCTTEEEEEEESCHHHHHHHHHHH
T ss_pred HHHHHHHcCCEEEEEcCccchHHHHHHHHHHHHhCcCCCeEEEEecCcHHHHHHHHhCCCCCEEEeCCCHHHHHHHHHHh
Confidence 899999998888999999999999999999999999999998
Q ss_pred hh-----cCCCceeEecCCCCceEEccCCCHHHHHHHHHHHHHhhcCCcccCCCeeEecchhHHHHHHHHHHHHhhcccC
Q 011130 250 AK-----SNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMKRVVG 324 (493)
Q Consensus 250 ~~-----~~~~pv~lelgG~~p~iV~~daDl~~aa~~i~~~~~~~~GQ~C~a~~~v~V~~~i~d~f~~~l~~~~~~~~vg 324 (493)
+. .++||+++|+|||||+||++|||++.|++.++.++|.|+||.|+++++||||++++|+|+++|+++++++++|
T Consensus 766 a~~~~~~~~lkpv~lElGGknp~IV~~dADld~Aa~~iv~saf~~aGQ~C~A~~rl~V~~~i~d~f~~~L~~~~~~l~vG 845 (1026)
T 4f9i_A 766 AKVHPGQANVKKIISEMGGKNAIIIDDDADLDEAVPHVLYSAFGFQGQKCSACSRVIVLDAVYDKFIERLVSMAKATKVG 845 (1026)
T ss_dssp TSCCTTCCSCCEEEEECCCCEEEEECTTCCHHHHHHHHHHHHHGGGGCSTTCEEEEEEEGGGHHHHHHHHHHHHHHCCBC
T ss_pred hcccccccCccceEEecCCCCeEEECCCCCHHHHHHHHHHHHHhCCCCCCCCCceEEecHHHHHHHHHHHHHHHHhcccC
Confidence 73 3789999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCCCccccCCCHHHHHHHHHHHHHHHhCCCEEEeCCcccCCCCceeeceEEecCCCCccccccccccceEEEEEeCC
Q 011130 325 DPFKGGIQQGPQIDSEQFEKILKYIRSGVDGGAKLETGGERLGAKGYYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYKD 404 (493)
Q Consensus 325 ~p~~~~~~~gpli~~~~~~~~~~~i~~a~~~ga~v~~gg~~~~~~g~~~~Ptvl~~~~~~~~i~~~E~fgPvl~v~~~~~ 404 (493)
+|.++++++||+|++.+++++.++|++++++| ++++||..++..|+|++|||+.+++++|++++||+||||++|++|+|
T Consensus 846 ~p~d~~t~~Gpvi~~~~~~~v~~~i~~a~~~G-~~v~gG~~~~~~G~fv~PTvl~~v~~~~~i~~eEiFGPVl~V~~~~d 924 (1026)
T 4f9i_A 846 PSEDPANYMGAVADDKAMKSIKEYAEIGKREG-HVLYESPVPAGEGYFVPMTIIGGIKPEHRIAQEEIFGPVLAVMRAKD 924 (1026)
T ss_dssp CTTSTTCSBCCCSSHHHHHHHHHHHHHHHHHS-EEEEECCCCSSSSCCCCCEEEESCCTTSGGGTSCCCSSEEEEEEESS
T ss_pred CcccccCccccccCHHHHHHHHHHHHHHHhCC-eEEecCCcCCCCCceecceeeecCCCCccccCceecCcEEEEEEeCC
Confidence 99999999999999999999999999999988 99999976554599999999999999999999999999999999999
Q ss_pred HHHHHHHHHcCCCCcEEEEecCCHHHHHHHHHhcceeEEEECCcCCC--CCCCCccCCCCCCCC-CcchHHHHHhhhhce
Q 011130 405 LDEVIQRSNASQYGLAAGVFTHNLDTANTLMRALRVGSVWINCFDVF--DAAIPFGGYKQSGQG-REKGSYSLSNYLQVK 481 (493)
Q Consensus 405 ~~eai~~~n~~~~gl~a~v~t~d~~~~~~~~~~l~~g~V~VN~~~~~--~~~~pfGG~~~SG~G-~~~g~~~l~~~~~~k 481 (493)
+||||+++|+++|||+++|||+|.+.++++++++++|+||||+.++. .+.+||||+|.||+| +++|++++++|++.|
T Consensus 925 ~deAI~~aN~t~yGLt~~V~t~d~~~a~~~~~~l~aG~v~IN~~~~~~~~~~~PFGG~k~SG~G~~~gG~~~l~~f~~~k 1004 (1026)
T 4f9i_A 925 FDQAIEWANSTQFALTGGIFSRSPEHLAKARREFRVGNLYINRNNTGALVERQPFGGARMSGVGTKAGGPDYLLHFMDPR 1004 (1026)
T ss_dssp HHHHHHHHTCSSCCSEEEEECCCHHHHHHHHHHSCCSEEEESSCSCCCCTTTSCBCCCGGGBSSCCBTSTTTGGGGEEEE
T ss_pred HHHHHHHHHcCCCCCeEEEECCCHHHHHHHHHhCCEeeEEEcCCCCCCCCCCCCCCCcCcCCCCCCcCCHHHHHHhceEE
Confidence 99999999999999999999999999999999999999999997653 478999999999999 579999999999999
Q ss_pred EEEEeC
Q 011130 482 AVVTAL 487 (493)
Q Consensus 482 ~v~~~~ 487 (493)
+|++..
T Consensus 1005 ~v~~~~ 1010 (1026)
T 4f9i_A 1005 VVTENT 1010 (1026)
T ss_dssp EEEEEC
T ss_pred EEEEec
Confidence 998875
No 41
>2y53_A Aldehyde dehydrogenase (BOX pathway); oxidoreductase, NADP, nucleotide-binding; HET: NAP; 1.40A {Burkholderia xenovorans LB400} PDB: 2y52_A 2y51_A 2vro_A* 2y5d_A*
Probab=100.00 E-value=2.6e-80 Score=659.37 Aligned_cols=411 Identities=24% Similarity=0.329 Sum_probs=371.1
Q ss_pred ccceeCCEeeeCCCCCeeeeecCCCCCeEEEEecCCHHHHHHHHHHHHHH-ccCCCCCCCCHHHHHHHHHHHHHHHHHhH
Q 011130 66 TQLLINGQFVDSASGKTFPTLDPRTGDVITHVAEGEAEDVNRAVSAARKA-FDEGPWPRMTAYERSKIILRFADLLERHN 144 (493)
Q Consensus 66 ~~~~I~G~~~~~~~~~~~~v~~P~tg~~i~~v~~~~~~~v~~av~~A~~A-~~~~~w~~~~~~~R~~iL~~la~~l~~~~ 144 (493)
.++||||+|+.+.+ .+++++||+||+++++++.++ +|+++|+++|++| |+ .|+++|..+|.++|++++++|++|.
T Consensus 8 ~~~~i~G~~~~~~~-~~~~v~nP~tg~~i~~~~~~~-~dv~~Av~aA~~A~~~--~w~~~~~~~R~~~L~~~a~~l~~~~ 83 (534)
T 2y53_A 8 LKNHVAGQWIAGTG-AGITLTDPVTGVALVRVSSEG-LDLARAFSFAREDGGA--ALRALTYAQRAARLADIVKLLQAKR 83 (534)
T ss_dssp CCEEETTEEECCSS-SCEEEECTTTCCEEEEECCTT-CCHHHHHHHHHHHHHH--HHHHSCHHHHHHHHHHHHHHHHHTH
T ss_pred hhhEECCEEecCCC-CeEEEECCCCCCEEEEEeCCH-HHHHHHHHHHHHHhhh--hhhhCCHHHHHHHHHHHHHHHHHhH
Confidence 57899999997544 579999999999999999988 9999999999999 58 8999999999999999999999999
Q ss_pred HHHHHHHHHHcCCChhhhhhccHHHHHHHHHHHHHhhHHhcCcc-------CCCC--CCceeEEEeeee-eeE-------
Q 011130 145 DEIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADKIQGLT-------APAD--GPYHVQTLHEPI-GVA------- 207 (493)
Q Consensus 145 ~ela~~~~~e~Gk~~~~a~~~Ev~~~~~~l~~~a~~~~~~~~~~-------~~~~--~~~~~~~~~~Pl-GVv------- 207 (493)
++|++++++|+|||+.++.. |+..+++.++||+.+++++.+.. .+.. .....+..++|+ |||
T Consensus 84 ~ela~~~~~e~Gk~~~ea~~-ev~~~~~~~~~~a~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~P~~GVv~~I~PwN 162 (534)
T 2y53_A 84 GDYYAIATANSGTTRNDSAV-DIDGGIFTLSYYAKLGASLGEVHALRDGSAESLSKDRSFSAQHVLSPTRGVALFINAFN 162 (534)
T ss_dssp HHHHHHHHHHHCCCHHHHHH-HHHHHHHHHHHHHHHHHTTCSCSEEEEEEEEECSTTSSEEEEEEEEECSSCEEEECCTT
T ss_pred HHHHHHHHHHhCCCHHHHHH-HHHHHHHHHHHHHHHHHhccccccccCCccccCCCCCcccceEEEecCCCEEEEECCCc
Confidence 99999999999999999985 99999999999999887765321 1221 122457889997 998
Q ss_pred -----------------------------------------------eEEEeeeCCccchhhhhhccccccEEEEecCcH
Q 011130 208 -----------------------------------------------GVLNIVSGYGPTAGAALASHMEVDKLAFTGSTT 240 (493)
Q Consensus 208 -----------------------------------------------gvv~vv~~~~~~~~~~L~~~~~v~~v~fTGs~~ 240 (493)
|++|+|++.+.++++.| +++|+|+||||+.
T Consensus 163 ~P~~~~~~~~a~ALaaGN~VVlKPs~~tp~~~~~l~~l~~~aG~lP~gvv~vv~g~~~~l~~~l---~~vd~V~FTGS~~ 239 (534)
T 2y53_A 163 FPSWGLWEKAAPALLSGVPVIVKPATATAWLTQRMVADVVDAGILPPGALSIICGSSAGLLDQI---RSFDVVSFTGSAD 239 (534)
T ss_dssp CTTHHHHHHHHHHHHTTCCEEEECCGGGHHHHHHHHHHHHHHTCSCTTSEEECCSCCTTSGGGC---CTTCEEEEESCHH
T ss_pred hHHHHHHHHHHHHHHcCCEEEEECCCcchHHHHHHHHHHHHhCCCCCCeEEEEeCChHHHHhcc---cccCEEEEECCHH
Confidence 77999998654433333 5799999999999
Q ss_pred HHHHHHHHHh--hcCCCceeEecCCCCceEEccCC-----CHHHHHHHHHHHHHhhcCCcccCCCeeEecchhHHHHHHH
Q 011130 241 TGKIVLQLAA--KSNLKPVTLELGGKSPFIVCEDA-----DVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFVEK 313 (493)
Q Consensus 241 ~g~~v~~~a~--~~~~~pv~lelgG~~p~iV~~da-----Dl~~aa~~i~~~~~~~~GQ~C~a~~~v~V~~~i~d~f~~~ 313 (493)
+|+.|++.++ + ++||+++|||||||+||++|| |+|.|++.+++++|.|+||.|++++|||||++++|+|+++
T Consensus 240 ~G~~i~~~aa~a~-~~k~v~lELGGk~p~iV~~dA~~~~~Dl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~i~d~f~~~ 318 (534)
T 2y53_A 240 TAATLRAHPAFVQ-RGARLNVQADSLNSAILCADATPDTPAFDLFIKEVVREMTVKSGQKCTAIRRAFVPEAALEPVLEA 318 (534)
T ss_dssp HHHHHHTSHHHHT-TCCEEEEECCCCEEEEECTTCCTTSHHHHHHHHHHHHHHHGGGGCCTTSEEEEEEEGGGHHHHHHH
T ss_pred HHHHHHHhhhhhc-CCCcEEEEcCCCCeEEECCCccccccCHHHHHHHHHHHHHhCCCCcccCCCEEEEeccHHHHHHHH
Confidence 9999998764 5 899999999999999999999 9999999999999999999999999999999999999999
Q ss_pred HHHHHhhcccCCCCCCCCccccCCCHHHHHHHHHHHHHHHhCCCEEEeCCcccC------CCCceeeceEEecCCCC--c
Q 011130 314 ANALAMKRVVGDPFKGGIQQGPQIDSEQFEKILKYIRSGVDGGAKLETGGERLG------AKGYYIKPTVFTGVKDD--M 385 (493)
Q Consensus 314 l~~~~~~~~vg~p~~~~~~~gpli~~~~~~~~~~~i~~a~~~ga~v~~gg~~~~------~~g~~~~Ptvl~~~~~~--~ 385 (493)
|+++++++++|||.|+++++||++++.+++++.++|+++ .+|+++++||.... ..|+|++|||+.+++++ |
T Consensus 319 l~~~~~~~~vG~p~~~~~~~Gpli~~~~~~rv~~~i~~a-~~ga~~~~GG~~~~~~~~~~~~g~~~~PTvl~~v~~~~~~ 397 (534)
T 2y53_A 319 LKAKLAKITVGNPRNDAVRMGSLVSREQYENVLAGIAAL-REEAVLAYDSSAVPLIDADANIAACVAPHLFVVNDPDNAT 397 (534)
T ss_dssp HHHHHTTCCBBCTTSTTCSBCCCSCHHHHHHHHHHHHHH-HTSSEEEEECTTSCCBSCCTTTSCCCCCEEEECSCGGGCS
T ss_pred HHHHHHhccCCCCCcCCCCccCCCCHHHHHHHHHHHHHH-HcCCEEEECCcccccccccCCCCceecCEEEEecCccccC
Confidence 999999999999999999999999999999999999999 68999999997421 36899999999999877 6
Q ss_pred cccccccccceEEEEEeC---CH-----HHHHHHHHcCCCCcEEEEecCCHHHHHHHHHhc--ceeEEEECCcCC-----
Q 011130 386 LIAKDEIFGPVQSILKYK---DL-----DEVIQRSNASQYGLAAGVFTHNLDTANTLMRAL--RVGSVWINCFDV----- 450 (493)
Q Consensus 386 ~i~~~E~fgPvl~v~~~~---~~-----~eai~~~n~~~~gl~a~v~t~d~~~~~~~~~~l--~~g~V~VN~~~~----- 450 (493)
++++||+||||++|++|+ |+ ||||+++|+++|||+++|||+|.+.++++++++ ++|+||||++..
T Consensus 398 ~i~~eEiFGPVl~v~~~~~~~~~~~~~~deAi~~aN~~~~gL~a~v~t~d~~~a~~~~~~l~~~aG~V~vN~~~~~~~~~ 477 (534)
T 2y53_A 398 LLHDVEVFGPVASVAPYRVTTDTNALPEAHAVALARRGQGSLVASIYSNDDAHLGRLALELADSHGRVHAISPSVQHSQT 477 (534)
T ss_dssp STTTCCCSSSEEEEEEECCCCC---CTTHHHHHHHHTTSSEEEEEEECSCHHHHHHHHHHHTTTEEEEEEECGGGTTTCC
T ss_pred HHHhCCCcCCEEEEEEECCCCCcccCCHHHHHHHHhCCCCCceEEEECCCHHHHHHHHHHHHhhCCEEEEcCCccccccc
Confidence 899999999999999999 99 999999999999999999999999999999999 899999998642
Q ss_pred ----CCCCCCccCCCCCCCCCc-chHHHHHhhhhceEEEEe
Q 011130 451 ----FDAAIPFGGYKQSGQGRE-KGSYSLSNYLQVKAVVTA 486 (493)
Q Consensus 451 ----~~~~~pfGG~~~SG~G~~-~g~~~l~~~~~~k~v~~~ 486 (493)
..+.+||||+|+||+|++ +|.+++++|++.|++...
T Consensus 478 ~~~~~~~~~pfGG~k~SG~Gr~~~g~~~l~~~~~~k~v~~~ 518 (534)
T 2y53_A 478 GHGNVMPMSLHGGPGRAGGGEELGGLRALAFYHRRSAIQAA 518 (534)
T ss_dssp CSSCCCTTSEECCSGGGCSCCEESGGGGGGGGEEEEEEEEE
T ss_pred ccCCCCCCCCCCCcccCCCCCCcchHHHHHHHhhhheeecC
Confidence 357899999999999999 699999999999998764
No 42
>3lns_A Benzaldehyde dehydrogenase; oxidoreductase, NADP+, class 3 aldehyde dehyd adduct, covalent catalysis, mandelate racemase pathway; HET: ZBZ NAP; 2.50A {Pseudomonas putida} PDB: 3lv1_A*
Probab=100.00 E-value=3.5e-79 Score=639.35 Aligned_cols=392 Identities=25% Similarity=0.394 Sum_probs=348.8
Q ss_pred CeeeeecCCCCCeEEEEecCCHHHHHHHHHHHHHHccCCCCCCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCChh
Q 011130 81 KTFPTLDPRTGDVITHVAEGEAEDVNRAVSAARKAFDEGPWPRMTAYERSKIILRFADLLERHNDEIAALETWDNGKPFE 160 (493)
Q Consensus 81 ~~~~v~~P~tg~~i~~v~~~~~~~v~~av~~A~~A~~~~~w~~~~~~~R~~iL~~la~~l~~~~~ela~~~~~e~Gk~~~ 160 (493)
..+++.||.||++|++++.++.+|+++++++|++||+ .|+.+|..+|.++|++++++|+++.++|++++++|+|||..
T Consensus 6 ~~~~~~~~~~~~~i~~v~~~~~~~v~~av~~A~~A~~--~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~ 83 (457)
T 3lns_A 6 HHHHHSSGHIDDDDKHMNYLSPAKIDSLFSAQKAYFA--TRATADVGFRKQSLERLKEAVINNKEALYSALAEDLGKPKD 83 (457)
T ss_dssp -----------------CCCCHHHHHHHHHHHHHHHH--TTTTCSHHHHHHHHHHHHHHHHTTHHHHHHHHHHHHCCCHH
T ss_pred ccccccCCCCCCeeeecCCCCHHHHHHHHHHHHHHHH--HhccCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhCCCHH
Confidence 4578999999999999999999999999999999999 99999999999999999999999999999999999999999
Q ss_pred hhhhccHHHHHHHHHHHHHhhHHhcCcc-CCC---CCCceeEEEeeeeeeE-----------------------------
Q 011130 161 QSAQTEVPMTTRLFRYYAGWADKIQGLT-APA---DGPYHVQTLHEPIGVA----------------------------- 207 (493)
Q Consensus 161 ~a~~~Ev~~~~~~l~~~a~~~~~~~~~~-~~~---~~~~~~~~~~~PlGVv----------------------------- 207 (493)
+++..|+..+++.++|+++.++++.... .+. ..+...++.++|+|||
T Consensus 84 ea~~~ev~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~PwN~P~~~~~~~~~~ALaaGN~VVl 163 (457)
T 3lns_A 84 VVDLAEIGAVLHEIDFALAHLDEWVAPVSVPSPDIIAPSECYVVQEPYGVTYIIGPFNYPVNLTLTPLIGAIIGGNTCII 163 (457)
T ss_dssp HHHHHTHHHHHHHHHHHHHHHHHHTSCEEECCCGGGCSCEEEEEEEECCEEEEECCSSSTTHHHHHHHHHHHHTTCEEEE
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhccccccccccCCCcceEEEeecceEEEEECCCcchHHHHHHHHHHHHHcCCEEEE
Confidence 9985699999999999998887765431 111 1245678999999999
Q ss_pred -----------------------eEEEeeeCCccchhhhhhccccccEEEEecCcHHHHHHHHHHhhcCCCceeEecCCC
Q 011130 208 -----------------------GVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLAAKSNLKPVTLELGGK 264 (493)
Q Consensus 208 -----------------------gvv~vv~~~~~~~~~~L~~~~~v~~v~fTGs~~~g~~v~~~a~~~~~~pv~lelgG~ 264 (493)
|++|+|++ +.+.++.|+. ++||+|+||||+.+|+.|++.+++ ++||+++|||||
T Consensus 164 Kps~~tp~t~~~l~~l~~~alP~gvv~vv~g-~~~~~~~L~~-~~vd~V~fTGS~~~G~~i~~~aa~-~l~pv~lElGGk 240 (457)
T 3lns_A 164 KPSETTPETSAVIEKIIAEAFAPEYVAVIQG-GRDENSHLLS-LPFDFIFFTGSPNVGKVVMQAAAK-HLTPVVLELGGK 240 (457)
T ss_dssp ECCTTCHHHHHHHHHHHHHHCCTTTEEECCC-CHHHHHHHTT-SCCSEEEEESCHHHHHHHHHHHHT-TTCCEEEECCCC
T ss_pred ECCCCChHHHHHHHHHHHHhCCHhhEEEecC-CHHHHHHHhc-CCCCEEEEECCHHHHHHHHHHHhh-ccCceEEECCCC
Confidence 89999999 6788889998 789999999999999999999998 899999999999
Q ss_pred CceEEccCCCHHHHHHHHHHHHHhhcCCcccCCCeeEecchhHHHHHHHHHHHHhhcccCCCCCCCCccccCCCHHHHHH
Q 011130 265 SPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMKRVVGDPFKGGIQQGPQIDSEQFEK 344 (493)
Q Consensus 265 ~p~iV~~daDl~~aa~~i~~~~~~~~GQ~C~a~~~v~V~~~i~d~f~~~l~~~~~~~~vg~p~~~~~~~gpli~~~~~~~ 344 (493)
||+||++|||++.|++.+++++|.|+||.|++++|||||++++|+|+++|++++++++ |.++ ++||++++.++++
T Consensus 241 ~p~iV~~dADl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~---p~~~--~~gpli~~~~~~r 315 (457)
T 3lns_A 241 CPLIVLPDADLDQTVNQLMFGKFINSGQTXIAPDYLYVHYSVKDALLERLVERVKTEL---PEIN--STGKLVTERQVQR 315 (457)
T ss_dssp EEEEECTTCCHHHHHHHHHHHHHGGGGCCTTSEEEEEEEGGGHHHHHHHHHHHHHHHC---CSTT--TTCCCSSHHHHHH
T ss_pred CCCeECCCCCHHHHHHHHHHHHHHhCCCCccCCceEEEcHHHHHHHHHHHHHHHHhcC---CCcc--cccCCCCHHHHHH
Confidence 9999999999999999999999999999999999999999999999999999999987 6666 9999999999999
Q ss_pred HHHHHHHHHhCCCEEEeCCcccCCCCceeeceEEecCCCCccccccccccceEEEEEeCCHHHHHHHHHc-CCCCcEEEE
Q 011130 345 ILKYIRSGVDGGAKLETGGERLGAKGYYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYKDLDEVIQRSNA-SQYGLAAGV 423 (493)
Q Consensus 345 ~~~~i~~a~~~ga~v~~gg~~~~~~g~~~~Ptvl~~~~~~~~i~~~E~fgPvl~v~~~~~~~eai~~~n~-~~~gl~a~v 423 (493)
+.++|+++ ++++++||... ..|+|++|||+.+++++|++++||+||||++|++|+|+||||+++|+ ++|||+++|
T Consensus 316 v~~~i~~a---~~~~~~gg~~~-~~g~~~~Ptvl~~v~~~~~i~~eEiFGPVl~v~~~~~~deAi~~aN~~~~~gL~a~v 391 (457)
T 3lns_A 316 LVSLLEAT---QGQVLVGSQAD-VSKRALSATVVDGVEWNDPLMSEELFGPILPVLEFDSVRTAIDQVNKHHPKPLAVYV 391 (457)
T ss_dssp HHHHHHHC---CSEEEECCCEE-GGGTEECCEEEESCCTTSGGGSSCCCSSEEEEEEESCHHHHHHHHHHHSCSCSEEEE
T ss_pred HHHHHHhc---CCeEEeCCccC-CCCceeCCEEEecCCCCChhhcCcccCcEEEEEEeCCHHHHHHHHHcCCCCCeEEEE
Confidence 99999985 36999999753 36899999999999999999999999999999999999999999999 999999999
Q ss_pred ecCCHHHHHHHHHhcceeEEEECCcCC--CCCCCCccCCCCCCCCCcchHHHHHhhhhceEEEEe
Q 011130 424 FTHNLDTANTLMRALRVGSVWINCFDV--FDAAIPFGGYKQSGQGREKGSYSLSNYLQVKAVVTA 486 (493)
Q Consensus 424 ~t~d~~~~~~~~~~l~~g~V~VN~~~~--~~~~~pfGG~~~SG~G~~~g~~~l~~~~~~k~v~~~ 486 (493)
||+|.+.++++++++++|+||||++.. ..+.+||||+|+||+|+++|.+++++|++.|+|++.
T Consensus 392 ~t~d~~~a~~~~~~l~aG~v~vN~~~~~~~~~~~PfGG~k~SG~G~~~g~~~~~~f~~~k~v~~~ 456 (457)
T 3lns_A 392 FGKDMDVAKGIINQIQSGDAQVNGVMLHAFSPYLPFGGIGASGMGEYHGHFSYLTFTHKKSVRIV 456 (457)
T ss_dssp ECSCHHHHHHHHHTSCCSEEEESCCSGGGGCTTSCBCCCGGGEECCBSHHHHHHHTEEEEEEEEC
T ss_pred ECCCHHHHHHHHHhCCcceEEEcCCCCCCCCCCCCcCCcCcCCCCCCchHHHHHHhhCeeEEEeC
Confidence 999999999999999999999999753 468899999999999999999999999999999764
No 43
>3sza_A Aldehyde dehydrogenase, dimeric NADP-preferring; ALDH, rossmann fold, oxidoreductase; 1.48A {Homo sapiens} SCOP: c.82.1.1 PDB: 3szb_A* 1ad3_A*
Probab=100.00 E-value=3.2e-77 Score=625.09 Aligned_cols=376 Identities=28% Similarity=0.384 Sum_probs=343.2
Q ss_pred CCHHHHHHHHHHHHHHccCCCCCCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCChhhhhhccHHHHHHHHHHHHH
Q 011130 100 GEAEDVNRAVSAARKAFDEGPWPRMTAYERSKIILRFADLLERHNDEIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAG 179 (493)
Q Consensus 100 ~~~~~v~~av~~A~~A~~~~~w~~~~~~~R~~iL~~la~~l~~~~~ela~~~~~e~Gk~~~~a~~~Ev~~~~~~l~~~a~ 179 (493)
.+.+|+++++++|++||+ .|+.++..+|.++|++++++|+++.++|++++++|+|||..++...|+..++..+++++.
T Consensus 15 ~s~~dv~~av~aA~~A~~--~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~ea~~~ev~~~~~~~~~~~~ 92 (469)
T 3sza_A 15 SHMSKISEAVKRARAAFS--SGRTRPLQFRIQQLEALQRLIQEQEQELVGALAADLHKNEWNAYYEEVVYVLEEIEYMIQ 92 (469)
T ss_dssp ---CHHHHHHHHHHHHHH--TTTTCSHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHCCCHHHHHHTTHHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHHHH--HhccCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHH
Confidence 567799999999999999 999999999999999999999999999999999999999999876699999999988876
Q ss_pred hhHHhcCcc----CCCCCCceeEEEeeeeeeE------------------------------------------------
Q 011130 180 WADKIQGLT----APADGPYHVQTLHEPIGVA------------------------------------------------ 207 (493)
Q Consensus 180 ~~~~~~~~~----~~~~~~~~~~~~~~PlGVv------------------------------------------------ 207 (493)
..++..... .....+...++.++|+|||
T Consensus 93 ~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~PwN~P~~~~~~~~~~ALaaGN~vVlKps~~tp~t~~~l~~l~~~ 172 (469)
T 3sza_A 93 KLPEWAADEPVEKTPQTQQDELYIHSEPLGVVLVIGTWNYPFNLTIQPMVGAIAAGNAVVLKPSELSENMASLLATIIPQ 172 (469)
T ss_dssp HHHHHHSCEECCCCGGGTTSEEEEEEEECSEEEEECCSSSTTHHHHHHHHHHHHTTCEEEEECCTTSHHHHHHHHHHHHH
T ss_pred HHHhhhcccccCccccCCCccceeeccCCCEEEEECCCcchHHHHHHHHHHHHHcCCEEEEECCCCChHHHHHHHHHHHH
Confidence 655443221 1112234678899999999
Q ss_pred ----eEEEeeeCCccchhhhhhccccccEEEEecCcHHHHHHHHHHhhcCCCceeEecCCCCceEEccCCCHHHHHHHHH
Q 011130 208 ----GVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLAAKSNLKPVTLELGGKSPFIVCEDADVDKAAELAH 283 (493)
Q Consensus 208 ----gvv~vv~~~~~~~~~~L~~~~~v~~v~fTGs~~~g~~v~~~a~~~~~~pv~lelgG~~p~iV~~daDl~~aa~~i~ 283 (493)
|++|+|+|.+ +.+..|+.| +||+|+||||+.+|+.|++.+++ ++||+++|||||||+||++|||+|.|++.++
T Consensus 173 alP~gvv~vv~g~~-~~~~~ll~~-~vd~I~FTGS~~vG~~i~~~aa~-~lkpv~lELGGk~p~iV~~dADl~~Aa~~i~ 249 (469)
T 3sza_A 173 YLDKDLYPVINGGV-PETTELLKE-RFDHILYTGSTGVGKIIMTAAAK-HLTPVTLELGGKSPCYVDKNCDLDVACRRIA 249 (469)
T ss_dssp HSCTTTSCBCCCSH-HHHHHHTTS-CCSEEEEESCHHHHHHHHHHHHT-TTCCEEEECCCCCEEEECTTSCHHHHHHHHH
T ss_pred hCCcceEEEEECCH-HHHHHHHhc-CCCEEEEECCHHHHHHHHHHHhh-ccCceEEecCCCCceEECCCCCHHHHHHHHH
Confidence 8999999844 445567777 89999999999999999999998 8999999999999999999999999999999
Q ss_pred HHHHhhcCCcccCCCeeEecchhHHHHHHHHHHHHhhcccCCCCCCCCccccCCCHHHHHHHHHHHHHHHhCCCEEEeCC
Q 011130 284 YALFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMKRVVGDPFKGGIQQGPQIDSEQFEKILKYIRSGVDGGAKLETGG 363 (493)
Q Consensus 284 ~~~~~~~GQ~C~a~~~v~V~~~i~d~f~~~l~~~~~~~~vg~p~~~~~~~gpli~~~~~~~~~~~i~~a~~~ga~v~~gg 363 (493)
+++|.|+||.|++++|||||++++|+|+++|+++++++ +|+|.++++++||++++.+++++.++| +|+++++||
T Consensus 250 ~~~~~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~-~g~~~~~~~~~gpli~~~~~~rv~~~i-----~ga~v~~GG 323 (469)
T 3sza_A 250 WGKFMNSGQTCVAPDYILCDPSIQNQIVEKLKKSLKEF-YGEDAKKSRDYGRIISARHFQRVMGLI-----EGQKVAYGG 323 (469)
T ss_dssp HHHHGGGGCCTTSCCEEEECGGGHHHHHHHHHHHHHHH-HCSCGGGCTTCCCCSCHHHHHHHHHHH-----TTSEEEECC
T ss_pred HHHHhcCCCCCCCCcEEEEehhHHHHHHHHHHHHHHHh-cCCCCcccCcccccCCHHHHHHHHHHH-----cCCEEEeCC
Confidence 99999999999999999999999999999999999988 699999999999999999999999998 589999999
Q ss_pred cccCCCCceeeceEEecCCCCccccccccccceEEEEEeCCHHHHHHHHHcCCCCcEEEEecCCHHHHHHHHHhcceeEE
Q 011130 364 ERLGAKGYYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYKDLDEVIQRSNASQYGLAAGVFTHNLDTANTLMRALRVGSV 443 (493)
Q Consensus 364 ~~~~~~g~~~~Ptvl~~~~~~~~i~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~a~v~t~d~~~~~~~~~~l~~g~V 443 (493)
... ..|+|++|||+.+++++|++++||+||||++|++|+|+||||+++|+++|||+++|||+|.+.++++++++++|+|
T Consensus 324 ~~~-~~g~~~~PTvl~~v~~~~~i~~eEiFGPVl~v~~~~~~deAi~~aN~~~~gLaa~v~t~d~~~a~~~~~~l~~G~V 402 (469)
T 3sza_A 324 TGD-AATRYIAPTILTDVDPQSPVMQEEIFGPVLPIVCVRSLEEAIQFINQREKPLALYMFSSNDKVIKKMIAETSSGGV 402 (469)
T ss_dssp CEE-TTTTEECCEEEESCCTTSGGGTSCCCSSEEEEEECSSHHHHHHHHHHSCCCSEEEEECSCHHHHHHHHHHCCCSEE
T ss_pred ccC-CCCceeCCeeecCCCCcchhhhccccCCeEEEEecCCHHHHHHHHHcCCCCceEEEECCCHHHHHHHHHhCCcceE
Confidence 864 4689999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred EECCcCC--CCCCCCccCCCCCCCCCcchHHHHHhhhhceEEEEeC
Q 011130 444 WINCFDV--FDAAIPFGGYKQSGQGREKGSYSLSNYLQVKAVVTAL 487 (493)
Q Consensus 444 ~VN~~~~--~~~~~pfGG~~~SG~G~~~g~~~l~~~~~~k~v~~~~ 487 (493)
|||++.. ..+.+||||+|+||+|+++|.+++++||+.|+|++..
T Consensus 403 ~vN~~~~~~~~~~~PfGG~k~SG~Gr~~G~~g~~~ft~~K~v~~~~ 448 (469)
T 3sza_A 403 AANDVIVHITLHSLPFGGVGNSGMGSYHGKKSFETFSHRRSCLVRP 448 (469)
T ss_dssp EESCSSGGGSCTTSCBCCCGGGEECCBSTHHHHHHTEEEEEEEECC
T ss_pred EEeCCCCCCCCCCCCcCCccccccCccchHHHHHHhhCeeEEEECC
Confidence 9999753 4688999999999999999999999999999998874
No 44
>3v4c_A Aldehyde dehydrogenase (NADP+); structural genomics, PSI-biology, nysgrc, NEW YORK structura genomics research consortium; HET: PE4; 1.91A {Sinorhizobium meliloti}
Probab=100.00 E-value=3e-77 Score=634.99 Aligned_cols=400 Identities=24% Similarity=0.317 Sum_probs=363.0
Q ss_pred CccccceeCCEeeeCCCCCeeeeecCCCCCeEE-EEecCCHHHHHHHHHHHHHHccCCCCCCCCHHHHHHHHHHHHHHHH
Q 011130 63 VDYTQLLINGQFVDSASGKTFPTLDPRTGDVIT-HVAEGEAEDVNRAVSAARKAFDEGPWPRMTAYERSKIILRFADLLE 141 (493)
Q Consensus 63 ~~~~~~~I~G~~~~~~~~~~~~v~~P~tg~~i~-~v~~~~~~~v~~av~~A~~A~~~~~w~~~~~~~R~~iL~~la~~l~ 141 (493)
....++||||+|+.+.+ ++||+||++++ +++.++.+|+++++++|++||+ .|++++..+|.++|++++++|+
T Consensus 27 ~~~~~~~I~G~~~~~~~-----v~nP~tg~~i~~~~~~~~~~dv~~av~~A~~A~~--~w~~~~~~~R~~~L~~~a~~l~ 99 (528)
T 3v4c_A 27 TPKGKHLVAGEWLDGAG-----TFASAPAHGPAHDFAVGTVELVNRACEAAEEAFW--TYGYSSRKERAAFLRAIADEIE 99 (528)
T ss_dssp CCCCCEEETTEEECCSS-----EEECCCSSSCCCEEECCCHHHHHHHHHHHHHHHH--HHTTCCHHHHHHHHHHHHHHHH
T ss_pred ccccCceECCEEecCCC-----ccCCCCCCEeeeEeCCCCHHHHHHHHHHHHHHHH--HHhhCCHHHHHHHHHHHHHHHH
Confidence 44568999999997532 89999999998 9999999999999999999999 9999999999999999999999
Q ss_pred HhHHHHHHHHHHHcCCChhhhhhccHHHHHHHHHHHHHhhHHh--cCccC----CC---CCCceeEEEeeeeeeE-----
Q 011130 142 RHNDEIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADKI--QGLTA----PA---DGPYHVQTLHEPIGVA----- 207 (493)
Q Consensus 142 ~~~~ela~~~~~e~Gk~~~~a~~~Ev~~~~~~l~~~a~~~~~~--~~~~~----~~---~~~~~~~~~~~PlGVv----- 207 (493)
+|.++|++++++|+|||+.+++. |+..+++.++|+++++++. ..... +. ..+...++.++|+|||
T Consensus 100 ~~~~ela~~~~~e~Gk~~~~a~~-ev~~~~~~l~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~P 178 (528)
T 3v4c_A 100 ARAEAITEIGSQETGLPEARLNG-ERGRTTGQLRLFADHIEKGDYLDRRVDAAMPERQPAPRQEIRLVQRPVGPVAVFGA 178 (528)
T ss_dssp HTHHHHHHHHHHHHCCCHHHHHH-HHHHHHHHHHHHHHHHHHCGGGCCEEECCBTTCSSSCBCCEEEEEEECSCEEEECC
T ss_pred HhHHHHHHHHHHHhCCCHHHHHH-HHHHHHHHHHHHHHHHhhccccccccccccccccCCCCCcceeEeeCCcEEEEECC
Confidence 99999999999999999999885 9999999999999988772 22211 11 1123467899999998
Q ss_pred ------------------------------------------------------eEEEeeeCCccchhhhhhccccccEE
Q 011130 208 ------------------------------------------------------GVLNIVSGYGPTAGAALASHMEVDKL 233 (493)
Q Consensus 208 ------------------------------------------------------gvv~vv~~~~~~~~~~L~~~~~v~~v 233 (493)
|++|+|++.+.++++.|+.||+||+|
T Consensus 179 wN~P~~~~~~~~~~a~ALaaGN~VVlKps~~tp~t~~~l~~l~~~~l~~aGlP~gvv~vv~g~~~~~g~~L~~~p~v~~V 258 (528)
T 3v4c_A 179 SNFPLAFSTAGGDTAAALAAGCPVVVKGHSAHPGTGEIVAEAVDAAIRKTGVHPGVFSLIQGGSRDVGHALVQHPHIKAV 258 (528)
T ss_dssp SSSTTTTSTTSHHHHHHHHHTCCEEEECCTTCHHHHHHHHHHHHHHHHHHTCCGGGEEEECCCCHHHHHHHHHCTTCCEE
T ss_pred CcchHHHhhhhhhhHHHHhcCCEEEEECCCCCcHHHHHHHHHHHHHHHhcCCCcCeEEEEeCCCHHHHHHHHhCCCCCEE
Confidence 88999999888899999999999999
Q ss_pred EEecCcHHHHHHHHHHhhcCC--CceeEecCCCCceEEccCC---CHHHHHHHHHHHHHhhcCCcccCCCeeEecch-hH
Q 011130 234 AFTGSTTTGKIVLQLAAKSNL--KPVTLELGGKSPFIVCEDA---DVDKAAELAHYALFFNQGQCCCAGSRTFVHES-VY 307 (493)
Q Consensus 234 ~fTGs~~~g~~v~~~a~~~~~--~pv~lelgG~~p~iV~~da---Dl~~aa~~i~~~~~~~~GQ~C~a~~~v~V~~~-i~ 307 (493)
+||||+.+|+.|++.+++ ++ ||+++|||||||+||++|| |++.|++.+++++|.|+||.|++++|||||++ ++
T Consensus 259 ~fTGS~~~G~~i~~~aa~-~~~~~pv~lElGGk~p~iV~~dAd~~dl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~~i~ 337 (528)
T 3v4c_A 259 GFTGSLAGGRALFDLCAA-RPEPIPFFGELGSVNPMFLLPEALKARAETLGQGWAGSLTMGAGQFCTNPGIAVVIEGADA 337 (528)
T ss_dssp EEESCHHHHHHHHHHHHH-SSSCCCEEEECCCCCCEEECHHHHHHHHHHHHHHHHHHHHGGGGCCTTCCCEEEEESSHHH
T ss_pred EEECChHHHHHHHHHHhh-ccCCCceEEecCCCCeEEECCCCChhhHHHHHHHHHHHHHhcCCCccccCcEEEEecccHH
Confidence 999999999999999998 88 9999999999999999999 88999999999999999999999999999997 99
Q ss_pred HHHHHHHHHHHhhcccCCCCCCCCccccCCCHHHHHHHHHHHHHHHhCCCEEEeCCcccCCCCceeeceEEecCCCC---
Q 011130 308 DQFVEKANALAMKRVVGDPFKGGIQQGPQIDSEQFEKILKYIRSGVDGGAKLETGGERLGAKGYYIKPTVFTGVKDD--- 384 (493)
Q Consensus 308 d~f~~~l~~~~~~~~vg~p~~~~~~~gpli~~~~~~~~~~~i~~a~~~ga~v~~gg~~~~~~g~~~~Ptvl~~~~~~--- 384 (493)
|+|+++|+++++++++| +.+||+++..+.+++.++++ ++|+++++||.. .|+|++|||+.++.++
T Consensus 338 d~f~~~l~~~~~~~~~~------~~~gp~~~~~~~~~v~~~~~---~~Ga~v~~gG~~---~g~~~~PTvl~~~~~~~~~ 405 (528)
T 3v4c_A 338 DRFTTAAVEALAKVAPQ------TMLTDGIAKAYRDGQARFAT---RNAVKPLLATES---SGRDASPNLFETTGAQFLA 405 (528)
T ss_dssp HHHHHHHHHHHHTCCCE------ECSCHHHHHHHHHHHHHHHT---CTTCEEEECCCC---CTTEECCEEEEEEHHHHHH
T ss_pred HHHHHHHHHHHHhcccC------CCCCHHHHHHHHHHHHHHHH---hCCCEEEeCCCc---CCceeccEEEEecCccccc
Confidence 99999999999988654 57899998888777777763 479999999975 6999999999988777
Q ss_pred ccccccccccceEEEEEeCCHHHHHHHHHcCCCCcEEEEecC--CHHHHHHHHHhcc--eeEEEECCcCC---CCCCCCc
Q 011130 385 MLIAKDEIFGPVQSILKYKDLDEVIQRSNASQYGLAAGVFTH--NLDTANTLMRALR--VGSVWINCFDV---FDAAIPF 457 (493)
Q Consensus 385 ~~i~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~a~v~t~--d~~~~~~~~~~l~--~g~V~VN~~~~---~~~~~pf 457 (493)
|++++||+||||++|++|+|+||||+++|+++|||+++|||+ |.+++++++++++ +|+||||++++ ..+.+||
T Consensus 406 ~~i~~eEiFGPVl~V~~~~~~deAi~~aN~~~~GL~a~v~t~d~d~~~a~~~a~~l~~~aG~V~vN~~~~~~~~~~~~pf 485 (528)
T 3v4c_A 406 DHALGEEVFGPLGLVVRVGSPAEMEELARGFQGQLTATIHMDAGDLETARRLRPVLERKAGRVLVNGFPTGVEVVDSMVH 485 (528)
T ss_dssp CGGGGCCCSSSEEEEEEESSHHHHHHHHHHCCCEEEEEEECCGGGHHHHHHHHHHHHHHEEEEEESSCTTCCCCSTTCCC
T ss_pred ChhhcccccCCeEEEEecCCHHHHHHHHhcCCCCceEEEEcCCCCHHHHHHHHHHHhhcCcEEEEcCCCCCCccCCCCCC
Confidence 899999999999999999999999999999999999999999 8899999999998 99999999765 3588999
Q ss_pred cC-CCCCCCCCcc--hHHHHHhhhhceEE
Q 011130 458 GG-YKQSGQGREK--GSYSLSNYLQVKAV 483 (493)
Q Consensus 458 GG-~~~SG~G~~~--g~~~l~~~~~~k~v 483 (493)
|| +|.||+|+++ |++++++|++.|++
T Consensus 486 GG~~~~Sg~gr~~~~G~~gl~~~~~~k~~ 514 (528)
T 3v4c_A 486 GGPYPASTNFGATSVGTMSIRRFLRPVAY 514 (528)
T ss_dssp CCTTTTBSCTTCCSSSGGGGGGGEEEEEE
T ss_pred CCCCCCCCCCCCCCCcHHHHHHhchhHHh
Confidence 99 9999999875 99999999999874
No 45
>1ez0_A ALDH, aldehyde dehydrogenase; nucleotide binding domain, NADP+, oxidoreductase; HET: NAP; 2.10A {Vibrio harveyi} SCOP: c.82.1.1 PDB: 1eyy_A*
Probab=100.00 E-value=2.8e-74 Score=609.79 Aligned_cols=390 Identities=20% Similarity=0.299 Sum_probs=354.5
Q ss_pred CCCCCeeeeecCCCCCeE-EEEecCCHHHHHHHHHHHHHHccCCCCCCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHc
Q 011130 77 SASGKTFPTLDPRTGDVI-THVAEGEAEDVNRAVSAARKAFDEGPWPRMTAYERSKIILRFADLLERHNDEIAALETWDN 155 (493)
Q Consensus 77 ~~~~~~~~v~~P~tg~~i-~~v~~~~~~~v~~av~~A~~A~~~~~w~~~~~~~R~~iL~~la~~l~~~~~ela~~~~~e~ 155 (493)
+.++++++++||+||+++ ++++.++.+|+++++++|++||+ .|++++..+|.++|++++++|++|.++|++++++|+
T Consensus 3 ~~~~~~~~~~nP~tg~~i~~~~~~~~~~~v~~av~aA~~A~~--~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~ 80 (510)
T 1ez0_A 3 PQTDNVFYATNAFTGEALPLAFPVHTEVEVNQAATAAAKVAR--DFRRLNNSKRASLLRTIASELEARSDDIIARAHLET 80 (510)
T ss_dssp --CCCEEEEECTTTSSEEEEEEECCCHHHHHHHHHHHHHHHH--HHHHSCHHHHHHHHHHHHHHHHHTHHHHHHHHHHHH
T ss_pred CCCCCeEEeECCCCCCEEEEEECCCCHHHHHHHHHHHHHHHH--HHccCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHh
Confidence 446788999999999999 79999999999999999999999 899999999999999999999999999999999999
Q ss_pred CCChhhhhhccHHHHHHHHHHHHHhhHH--hcCccC----CCC--CC-ceeEEEeeeeeeE-------------------
Q 011130 156 GKPFEQSAQTEVPMTTRLFRYYAGWADK--IQGLTA----PAD--GP-YHVQTLHEPIGVA------------------- 207 (493)
Q Consensus 156 Gk~~~~a~~~Ev~~~~~~l~~~a~~~~~--~~~~~~----~~~--~~-~~~~~~~~PlGVv------------------- 207 (493)
|||+.++.. |+..+++.++|+++++++ ..+... +.. .+ ...++.++|+|||
T Consensus 81 Gk~~~~a~~-Ev~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~PwN~P~~~~~~~~~~ 159 (510)
T 1ez0_A 81 ALPEVRLTG-EIARTANQLRLFADVVNSGSYHQAILDTPNPTRAPLPKPDIRRQQIALGPVAVFGASNFPLAFSAAGGDT 159 (510)
T ss_dssp CCCHHHHHH-HHHHHHHHHHHHHHHHHHTGGGCEEEECCBTTCSSSCBCCEEEEEEECSCEEEECCSSCTTTTSTTSHHH
T ss_pred CCCHHHHHH-HHHHHHHHHHHHHHHHHhCccccccccccccccCCCCCCCceEEEecCcEEEEECCccchhhhhhhHHHH
Confidence 999988864 999999999999998876 333221 111 11 1357899999998
Q ss_pred ----------------------------------------eEEEeeeCCccchhhhhhccccccEEEEecCcHHHHHHHH
Q 011130 208 ----------------------------------------GVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQ 247 (493)
Q Consensus 208 ----------------------------------------gvv~vv~~~~~~~~~~L~~~~~v~~v~fTGs~~~g~~v~~ 247 (493)
|++|+|++.+.++++.|+.||+||+|+||||+.+|+.|++
T Consensus 160 ~~ALaaGN~VVlKps~~tp~t~~~l~~l~~~al~~aGlP~gvv~vv~g~~~~~g~~L~~~p~v~~I~FTGS~~~G~~i~~ 239 (510)
T 1ez0_A 160 ASALAAGCPVIVKGHTAHPGTSQIVAECIEQALKQEQLPQAIFTLLQGNQRALGQALVSHPEIKAVGFTGSVGGGRALFN 239 (510)
T ss_dssp HHHHHHTCCEEEECCTTCHHHHHHHHHHHHHHHHHHTCCGGGEEEECCSCTHHHHHHHHCTTCCEEEEESCHHHHHHHHH
T ss_pred HHHHHcCCEEEEECCCCchHHHHHHHHHHHHHHHHhCCCCCeEEEEeCCcHHHHHHHHcCCCCCEEEEeCcHHHHHHHHH
Confidence 8899999977888999999999999999999999999999
Q ss_pred HHhhcCC--CceeEecCCCCceEEccCCCHH--HHHHHHHHHHHhhcCCcccCCCeeEecch-hHHHHHHHHHHHHhhcc
Q 011130 248 LAAKSNL--KPVTLELGGKSPFIVCEDADVD--KAAELAHYALFFNQGQCCCAGSRTFVHES-VYDQFVEKANALAMKRV 322 (493)
Q Consensus 248 ~a~~~~~--~pv~lelgG~~p~iV~~daDl~--~aa~~i~~~~~~~~GQ~C~a~~~v~V~~~-i~d~f~~~l~~~~~~~~ 322 (493)
.+++ ++ ||+++|||||||+||++|||+| .|++.+++++|.|+||.|++++|||||++ ++|+|+++|++++++++
T Consensus 240 ~aa~-~l~~~pv~lELGGk~p~iV~~dADl~~~~aa~~i~~~~~~n~GQ~C~a~~rvlV~~~~i~d~f~~~l~~~~~~~~ 318 (510)
T 1ez0_A 240 LAHE-RPEPIPFYGELGAINPTFIFPSAMRAKADLADQFVASMTMGCGQFCTKPGVVFALNTPETQAFIETAQSLIRQQS 318 (510)
T ss_dssp HHHH-SSSCCCEEEECCCCCEEEECHHHHHHCTTHHHHHHHHHTGGGGCCTTCCCEEEEESSHHHHHHHHHHHHHHHHCC
T ss_pred Hhhc-cCCCccEEEECCCCCeEEEeCCCCccHHHHHHHHHHHHHcCCCCCcCCCCEEEEeCCccHHHHHHHHHHHHHhcC
Confidence 9988 65 9999999999999999999999 99999999999999999999999999999 99999999999999876
Q ss_pred cCCCCCCCCccccCCCHHHHHHHHHHHHHHHh-CCCEEEeCCcccCCCCceeeceEEecCCCC---ccccccccccceEE
Q 011130 323 VGDPFKGGIQQGPQIDSEQFEKILKYIRSGVD-GGAKLETGGERLGAKGYYIKPTVFTGVKDD---MLIAKDEIFGPVQS 398 (493)
Q Consensus 323 vg~p~~~~~~~gpli~~~~~~~~~~~i~~a~~-~ga~v~~gg~~~~~~g~~~~Ptvl~~~~~~---~~i~~~E~fgPvl~ 398 (493)
.||++++.+.+++.++|+++++ +|+++++||. .|+|++|||+.++.++ |++++||+||||++
T Consensus 319 ----------~gp~~~~~~~~~~~~~v~~~~~~~Ga~~~~gg~----~g~~~~Ptvl~~~~~~~~~~~i~~eEiFGPVl~ 384 (510)
T 1ez0_A 319 ----------PSTLLTPGIRDSYQSQVVSRGSDDGIDVTFSQA----ESPCVASALFVTSSENWRKHPAWEEEIFGPQSL 384 (510)
T ss_dssp ----------CBCCSSHHHHHHHHHHHHHHHTSTTEEEEECCC----CTTSBCCEEEEEEHHHHHHCGGGGSCCCSSEEE
T ss_pred ----------CCCCCCHHHHHHHHHHHHHHHhcCCCEEEecCC----CCCEecCEEEEecCCccccCHHHcCCccCCeEE
Confidence 3688999999999999999984 7999999997 2899999999987777 99999999999999
Q ss_pred EEEeCCHHHHHHHHHcCCCCcEEEEecCCH--HHHHHHHHhc--ceeEEEECCcCC---CCCCCCccC-CCCCCCCC--c
Q 011130 399 ILKYKDLDEVIQRSNASQYGLAAGVFTHNL--DTANTLMRAL--RVGSVWINCFDV---FDAAIPFGG-YKQSGQGR--E 468 (493)
Q Consensus 399 v~~~~~~~eai~~~n~~~~gl~a~v~t~d~--~~~~~~~~~l--~~g~V~VN~~~~---~~~~~pfGG-~~~SG~G~--~ 468 (493)
|++|+|+||||+++|+++|||+++|||+|. +.++++++++ ++|+||||+++. +.+.+|||| +|.||+|+ +
T Consensus 385 v~~~~~~deai~~aN~~~~gLaa~v~t~d~~~~~a~~~~~~l~~~aG~V~iN~~~~~~~~~~~~pfGG~~~~sG~g~~~~ 464 (510)
T 1ez0_A 385 IVVCENVADMLSLSEMLAGSLTATIHATEEDYPQVSQLIPRLEEIAGRLVFNGWPTGVEVGYAMVHGGPYPASTHSASTS 464 (510)
T ss_dssp EEEESSHHHHHHHHHTCCCEEEEEEECCGGGHHHHHHHHHHHHTTEEEEEESSCSSCCCCSSSCCCCCSTTSCSCSSCCS
T ss_pred EEEeCCHHHHHHHHhcCCCCeEEEEEccCcCHHHHHHHHHHHhhcccEEEECCCCccCccCCCCCCCCCCCCcCCCCCCC
Confidence 999999999999999999999999999987 7899999999 799999998764 457899999 79999875 4
Q ss_pred chHHHHHhhhhceEEE
Q 011130 469 KGSYSLSNYLQVKAVV 484 (493)
Q Consensus 469 ~g~~~l~~~~~~k~v~ 484 (493)
+|.+++++|++.|.+.
T Consensus 465 ~G~~gl~~~~~~k~~~ 480 (510)
T 1ez0_A 465 VGAEAIHRWLRPVAYQ 480 (510)
T ss_dssp SSGGGGGGGEEEEEEE
T ss_pred ccHHHHHHhheEEEEc
Confidence 7999999999998764
No 46
>3haz_A Proline dehydrogenase; proline utilization A, PUTA, flavoenzyme, 1-pyrroline-5-carboxylate dehydrogenase, oxidoreductase; HET: FAD NAD; 2.10A {Bradyrhizobium japonicum usda 110}
Probab=100.00 E-value=9e-73 Score=630.84 Aligned_cols=382 Identities=27% Similarity=0.421 Sum_probs=356.9
Q ss_pred EecCCHHHHHHHHHHHHHHccCCCCCCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCChhhhhhccHHHHHHHHHH
Q 011130 97 VAEGEAEDVNRAVSAARKAFDEGPWPRMTAYERSKIILRFADLLERHNDEIAALETWDNGKPFEQSAQTEVPMTTRLFRY 176 (493)
Q Consensus 97 v~~~~~~~v~~av~~A~~A~~~~~w~~~~~~~R~~iL~~la~~l~~~~~ela~~~~~e~Gk~~~~a~~~Ev~~~~~~l~~ 176 (493)
|+.++.+|+++||++|++||. .|+.+|..+|.++|++++++|+++.++|++++++|+|||+.++.. |+..+++.++|
T Consensus 544 v~~a~~~dv~~Av~aA~~A~~--~W~~~~~~eR~~iL~~~ad~l~~~~~eLa~~~~~E~GK~~~ea~~-Ev~~ai~~lr~ 620 (1001)
T 3haz_A 544 IADATPDQAHAAVAAARAGFA--GWSRTPAGIRAAALEQAAHLLESRSAHFIALLQREGGKTLDDALS-ELREAADFCRY 620 (1001)
T ss_dssp CCCCCHHHHHHHHHHHHHHHH--HHHTSCHHHHHHHHHHHHHHHHHTHHHHHHHHHHTTCCCHHHHHH-HHHHHHHHHHH
T ss_pred cccCCHHHHHHHHHHHHHHHH--HhccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCChhHHHH-HHHHHHHHHHH
Confidence 889999999999999999999 999999999999999999999999999999999999999999975 99999999999
Q ss_pred HHHhhHHhcCcc--CCCCCCceeEEEeeeeeeE-----------------------------------------------
Q 011130 177 YAGWADKIQGLT--APADGPYHVQTLHEPIGVA----------------------------------------------- 207 (493)
Q Consensus 177 ~a~~~~~~~~~~--~~~~~~~~~~~~~~PlGVv----------------------------------------------- 207 (493)
|+.+++++.+.. .+...+...++.++|+|||
T Consensus 621 ~a~~a~~~~g~~~~~~~~~g~~~~~~~~P~GVV~~I~PwNfPl~i~~~~va~ALAAGNtVVlKPse~tp~ta~~l~ell~ 700 (1001)
T 3haz_A 621 YAAQGRKLFGSETAMPGPTGESNALTMRGRGVFVAISPWNFPLAIFLGQVTAALMAGNSVVAKPAEQTPRIAREAVALLH 700 (1001)
T ss_dssp HHHHHHHHHSSCEECCCCTTEEEEEEEEECSEEEEECCSSSTTHHHHHHHHHHHHTTCEEEEECCTTCHHHHHHHHHHHH
T ss_pred HHHHHHhhcCccccccCCCCCceEEEEeCCcEEEEEcCCCChHHHHHHHHHHHHHcCCEEEEecchhhHHHHHHHHHHHH
Confidence 999998876643 3333456788899999998
Q ss_pred ------eEEEeeeCCccchhhhhhccccccEEEEecCcHHHHHHHHHHhhc--CCCceeEecCCCCceEEccCCCHHHHH
Q 011130 208 ------GVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLAAKS--NLKPVTLELGGKSPFIVCEDADVDKAA 279 (493)
Q Consensus 208 ------gvv~vv~~~~~~~~~~L~~~~~v~~v~fTGs~~~g~~v~~~a~~~--~~~pv~lelgG~~p~iV~~daDl~~aa 279 (493)
|++|+|+|.+.+ ++.|+.||+|++|+||||+.+|+.|++.+++. ++||+++|+|||||+||++|||++.|+
T Consensus 701 eAGlP~gvv~vV~G~g~~-g~~L~~~p~Vd~V~FTGSt~vGr~I~~~aA~~~~~l~pv~lElGGknp~IV~~dADld~Aa 779 (1001)
T 3haz_A 701 EAGIPKSALYLVTGDGRI-GAALTAHPDIAGVVFTGSTEVARSINRALAAKDGPIVPLIAETGGINAMIADATALPEQVA 779 (1001)
T ss_dssp HHTCCTTTEEECCCCHHH-HHHHHHCTTCCEEEEESCHHHHHHHHHHHHHSSSCCCCEEEECCCCEEEEECTTSCHHHHH
T ss_pred HhCcCcCcEEEEecCchH-HHHHHhCCCcCEEEecCCHHHHHHHHHHHhcccCCCceEEeecCCcceEEEcCCCCHHHHH
Confidence 899999998777 99999999999999999999999999998862 489999999999999999999999999
Q ss_pred HHHHHHHHhhcCCcccCCCeeEecchhHHHHHHHHHHHHhhcccCCCCCCCCccccCCCHHHHHHHHHHHHHHHhCCCEE
Q 011130 280 ELAHYALFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMKRVVGDPFKGGIQQGPQIDSEQFEKILKYIRSGVDGGAKL 359 (493)
Q Consensus 280 ~~i~~~~~~~~GQ~C~a~~~v~V~~~i~d~f~~~l~~~~~~~~vg~p~~~~~~~gpli~~~~~~~~~~~i~~a~~~ga~v 359 (493)
+.+++++|.|+||.|+++++||||++++|+|+++|++++.++++|+|.++++++||+++..+++++.++|+++++.| ++
T Consensus 780 ~~iv~s~f~naGQ~C~A~~rllV~e~i~d~f~~~L~~~~~~l~vGdp~d~~t~~Gpli~~~~~~rv~~~i~~a~~~g-~v 858 (1001)
T 3haz_A 780 DDVVTSAFRSAGQRCSALRLLFVQEDVADRMIEMVAGAARELKIGDPSDVATHVGPVIDVEAKQRLDAHIARMKTEA-RL 858 (1001)
T ss_dssp HHHHHHHHGGGGCSTTCEEEEEEEHHHHHHHHHHHHHHHHTCCBSCTTSTTCSBCCCSCHHHHHHHHHHHHHHHHHS-EE
T ss_pred HHHHHHHHhCCCCCCCCCceeeccHHHHHHHHHHHHHHHHhcCCCCcccccCccCCCCCHHHHHHHHHHHHHHHhcC-eE
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999998888 88
Q ss_pred EeCCcccCCCCceeeceEEecCCCCccccccccccceEEEEEeCC--HHHHHHHHHcCCCCcEEEEecCCHHHHHHHHHh
Q 011130 360 ETGGERLGAKGYYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYKD--LDEVIQRSNASQYGLAAGVFTHNLDTANTLMRA 437 (493)
Q Consensus 360 ~~gg~~~~~~g~~~~Ptvl~~~~~~~~i~~~E~fgPvl~v~~~~~--~~eai~~~n~~~~gl~a~v~t~d~~~~~~~~~~ 437 (493)
+||..+ +.|+|+.|||+.+ +++.+++||+||||++|++|++ +||||+++|+++|||+++|||+|.+++++++++
T Consensus 859 -~gg~~~-~~G~fv~PTvl~~--~~~~~~~eEiFGPVL~V~~~~~~~ldeAI~~aN~t~yGLta~V~T~d~~~a~~~a~~ 934 (1001)
T 3haz_A 859 -HFAGPA-PEGCFVAPHIFEL--TEAGQLTEEVFGPILHVVRYRPENLERVLRAIERTGYGLTLGVHSRIDDSIEAIIDR 934 (1001)
T ss_dssp -EEECCC-CSSSCCCCEEEEC--SSGGGCCSCCCSSEEEEEEECGGGHHHHHHHHHHTCCCSEEEEECSCHHHHHHHHHH
T ss_pred -eccccC-CCCcEEeeEEecC--CCHHHHhccccCcEEEEEEeCCCCHHHHHHHHHcCCCCceEEEEcCCHHHHHHHHHh
Confidence 888754 3599999999985 6789999999999999999996 799999999999999999999999999999999
Q ss_pred cceeEEEECCcCCC--CCCCCccCCCCCCCC-CcchHHHHHhhhhceEEEEeC
Q 011130 438 LRVGSVWINCFDVF--DAAIPFGGYKQSGQG-REKGSYSLSNYLQVKAVVTAL 487 (493)
Q Consensus 438 l~~g~V~VN~~~~~--~~~~pfGG~~~SG~G-~~~g~~~l~~~~~~k~v~~~~ 487 (493)
+++|+||||++... .+.+||||+|.||+| +++|++++++|++.|+|+++.
T Consensus 935 l~aG~V~VN~~~~~~~~~~~PFGG~k~SG~G~~~gG~~gl~~ft~~K~v~~~~ 987 (1001)
T 3haz_A 935 VQVGNIYVNRNMIGAVVGVQPFGGNGLSGTGPKAGGPHYLARFATEQTVTINT 987 (1001)
T ss_dssp CCCSEEEESSCSCCCCTTTSCBCCCGGGBCCCCBTSTTSGGGGEEEEEEEEEC
T ss_pred CCeeeEEEeCCCcCCCCCCCCCCCcccCcCCCCCCCHHHHHHhceeeEEEECC
Confidence 99999999997653 357899999999999 678999999999999998874
No 47
>2h5g_A Delta 1-pyrroline-5-carboxylate synthetase; dehydrogenase, structural genomics, structural genomics CONS SGC, oxidoreductase; 2.25A {Homo sapiens}
Probab=100.00 E-value=3.4e-68 Score=555.56 Aligned_cols=354 Identities=18% Similarity=0.162 Sum_probs=287.8
Q ss_pred eeecCCCCCeEEEEecCCHHHHHHHHHHHHHHccCCCCCCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHc-------C
Q 011130 84 PTLDPRTGDVITHVAEGEAEDVNRAVSAARKAFDEGPWPRMTAYERSKIILRFADLLERHNDEIAALETWDN-------G 156 (493)
Q Consensus 84 ~v~~P~tg~~i~~v~~~~~~~v~~av~~A~~A~~~~~w~~~~~~~R~~iL~~la~~l~~~~~ela~~~~~e~-------G 156 (493)
-++||+||+++++++.++.+|+++++++|++||+ .|+.+|..+|.++|++++++|+++.++|++++++|+ |
T Consensus 10 ~~~~P~tg~~~~~~~~~~~~~v~~av~aA~~A~~--~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~g~~~~~~G 87 (463)
T 2h5g_A 10 GVDLGTENLYFQSMVKPAGPTVEQQGEMARSGGR--MLATLEPEQRAEIIHHLADLLTDQRDEILLANKKDLEEAEGRLA 87 (463)
T ss_dssp -------------------CCHHHHHHHHHHHHH--HHHHSCHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHHHHTTTSC
T ss_pred CCcCCCCCCEEEEecCCCHHHHHHHHHHHHHHHH--HHhhCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhhcccccCC
Confidence 4789999999999999999999999999999999 899999999999999999999999999999999999 7
Q ss_pred CChh----hhhhccHHHHHHHHHHHHHhhHHhcCccCCCC---CCceeEEEeeeeeeE----------------------
Q 011130 157 KPFE----QSAQTEVPMTTRLFRYYAGWADKIQGLTAPAD---GPYHVQTLHEPIGVA---------------------- 207 (493)
Q Consensus 157 k~~~----~a~~~Ev~~~~~~l~~~a~~~~~~~~~~~~~~---~~~~~~~~~~PlGVv---------------------- 207 (493)
||+. ++. .|+..+++.++|+++++++..+...+.. .+...++.++|+|||
T Consensus 88 k~~~~rl~~a~-~ev~~~~~~~~~~a~~~~~~~g~~~~~~~~~~~~~~~~~~~P~GVv~~I~p~nP~n~p~~~a~ALaaG 166 (463)
T 2h5g_A 88 APLLKRLSLST-SKLNSLAIGLRQIAASSQDSVGRVLRRTRIAKNLELEQVTVPIGVLLVIFESRPDCLPQVAALAIASG 166 (463)
T ss_dssp HHHHHTTCCCH-HHHHHHHHHHHHHHHHCTTSTTCEEEEEEEETTEEEEEEEEECCEEEEEESSCTTHHHHHHHHHHHHT
T ss_pred CchhhhhhhhH-HHHHHHHHHHHHHHHhhHhhcCcccccccCCCCceeEEEEEcCceEEEEecCCcHHHHHHHHHHHHcC
Confidence 9987 455 5999999999999988877766543321 234568899999998
Q ss_pred --------------------------------eEEEeeeCCccchhhhhhccccccEEEEecCcHHHHHHHHHHhhcCCC
Q 011130 208 --------------------------------GVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLAAKSNLK 255 (493)
Q Consensus 208 --------------------------------gvv~vv~~~~~~~~~~L~~~~~v~~v~fTGs~~~g~~v~~~a~~~~~~ 255 (493)
|++|+|++ +.++++.|+.||+||+|+||||+.+|+.|++.++ +|
T Consensus 167 N~VVlKps~~tp~t~~~l~~l~~~al~~~GP~gvv~vv~g-~~~~g~~L~~~p~vd~I~FTGS~~~G~~i~~~aa---l~ 242 (463)
T 2h5g_A 167 NGLLLKGGKEAAHSNRILHLLTQEALSIHGVKEAVQLVNT-REEVEDLCRLDKMIDLIIPRGSSQLVRDIQKAAK---GI 242 (463)
T ss_dssp CEEEEECCGGGHHHHHHHHHHHHHHHHTTTCGGGEEECCT-TCCC-------CCCSEEEEESCHHHHHHHHHHCS---SS
T ss_pred CEEEEECCCCcHHHHHHHHHHHHHHHHhcCCCCeEEEEcC-CHHHHHHHHhCCCcCEEEEECCHHHHHHHHHhcC---CC
Confidence 36899998 7788999999999999999999999999999876 69
Q ss_pred ceeEecCCCCceEEccCCCHHHHHHHHHHHHHhhcCCcccCCCeeEecchhHHHHHHHHHHHHhhcccCCCCCCCCcccc
Q 011130 256 PVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMKRVVGDPFKGGIQQGP 335 (493)
Q Consensus 256 pv~lelgG~~p~iV~~daDl~~aa~~i~~~~~~~~GQ~C~a~~~v~V~~~i~d~f~~~l~~~~~~~~vg~p~~~~~~~gp 335 (493)
|+++|||||||+||++|||++.|++.+++++|.| ||.|++++|||||++++| ||
T Consensus 243 pv~lElGGk~p~iV~~dADl~~Aa~~i~~~~f~n-GQ~C~a~~rvlV~~~i~d-------------------------~p 296 (463)
T 2h5g_A 243 PVMGHSEGICHMYVDSEASVDKVTRLVRDSKCEY-PAACNALETLLIHRDLLR-------------------------TP 296 (463)
T ss_dssp CBCSCSCCCEEEEECTTCCTTTHHHHHHHHHHSC-TTSTTSEEEEEEEGGGTT-------------------------SH
T ss_pred CEEEecCCcceEEEcCCCCHHHHHHHHHHHhccC-CCccccCcEEEEeccccc-------------------------hH
Confidence 9999999999999999999999999999999999 999999999999999998 23
Q ss_pred CCCHHHHHHHHHHHHHHHhCCCEEEeCCcccCCCCceeeceEEecCCCCccccccccccceEEEEEeCCHHHHHHHHHcC
Q 011130 336 QIDSEQFEKILKYIRSGVDGGAKLETGGERLGAKGYYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYKDLDEVIQRSNAS 415 (493)
Q Consensus 336 li~~~~~~~~~~~i~~a~~~ga~v~~gg~~~~~~g~~~~Ptvl~~~~~~~~i~~~E~fgPvl~v~~~~~~~eai~~~n~~ 415 (493)
+ ++ +++++++++|++++.|+.. ...|+|+ +++|++++||+||||++|++|+|+||||+++|++
T Consensus 297 ~-----~~---~~i~~~~~~Ga~v~~G~~~-~~~g~~~--------~~~~~i~~eE~FgPvl~v~~~~~~deAi~~aN~~ 359 (463)
T 2h5g_A 297 L-----FD---QIIDMLRVEQVKIHAGPKF-ASYLTFS--------PSEVKSLRTEYGDLELCIEVVDNVQDAIDHIHKY 359 (463)
T ss_dssp H-----HH---HHHHHHHHTTCEEEECHHH-HC-----------------CCSSCCCCSSEEEEEEESSHHHHHHHHHHH
T ss_pred H-----HH---HHHHHHHhCCCEEEeCCcc-cccCccC--------CCCchHHhccccCceEEEEEeCCHHHHHHHHHcC
Confidence 2 23 3577788899999855432 2245553 5789999999999999999999999999999999
Q ss_pred CCCcEEEEecCCHHHHHHHHHhcceeEEEECCcCCCCCCCCccCCCCCCCC--Cc--chHHHHHhhhhceEEEEeC
Q 011130 416 QYGLAAGVFTHNLDTANTLMRALRVGSVWINCFDVFDAAIPFGGYKQSGQG--RE--KGSYSLSNYLQVKAVVTAL 487 (493)
Q Consensus 416 ~~gl~a~v~t~d~~~~~~~~~~l~~g~V~VN~~~~~~~~~pfGG~~~SG~G--~~--~g~~~l~~~~~~k~v~~~~ 487 (493)
+|||+++|||+|.+.++++++++++|+||||++....+.+||||+|+||+| ++ +|.+++++|++.|+|++..
T Consensus 360 ~~gLaa~v~t~d~~~a~~~~~~l~aG~V~iN~~~~~~~~~PfGG~k~SG~G~~r~~~~G~~gl~~ft~~K~v~~~~ 435 (463)
T 2h5g_A 360 GSSHTDVIVTEDENTAEFFLQHVDSACVFWNASTRFSDGYRFGLGAEVGISTSRIHARGPVGLEGLLTTKWLLRGK 435 (463)
T ss_dssp CCSSEEEEECSCHHHHHHHHHHCCSSEEEESSCGGGCSTTTTTSSCCSCEECCSSSCCEECCGGGGEEEEEEEECS
T ss_pred CCCceEEEEeCCHHHHHHHHHhCCeeEEEEeCCccCCCCCCCCCCccCcCCCCcccCCCHHHHHHhceeEEEEECC
Confidence 999999999999999999999999999999998777889999999999999 65 9999999999999998864
No 48
>3k9d_A LMO1179 protein, aldehyde dehydrogenase; structural genomics, PSI-2, protein initiative; 2.00A {Listeria monocytogenes}
Probab=100.00 E-value=2.6e-65 Score=535.46 Aligned_cols=367 Identities=14% Similarity=0.188 Sum_probs=320.8
Q ss_pred EEecCCHHHHHHHHHHHHHHccCCCCCCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCChhhhhhccHHHHHHHHH
Q 011130 96 HVAEGEAEDVNRAVSAARKAFDEGPWPRMTAYERSKIILRFADLLERHNDEIAALETWDNGKPFEQSAQTEVPMTTRLFR 175 (493)
Q Consensus 96 ~v~~~~~~~v~~av~~A~~A~~~~~w~~~~~~~R~~iL~~la~~l~~~~~ela~~~~~e~Gk~~~~a~~~Ev~~~~~~l~ 175 (493)
+++.++.+|+++++++|++||+ .|+.++.++|.++|++++++|+++.++|++++++|+|||..+++..+...+++
T Consensus 5 ~~~~~~~~~v~~av~~A~~A~~--~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~e~~~~~~~~~~~--- 79 (464)
T 3k9d_A 5 DKDLRSIQEVRNLIESANKAQK--ELAAMSQQQIDTIVKAIADAGYGAREKLAKMAHEETGFGIWQDKVIKNVFASK--- 79 (464)
T ss_dssp SHHHHHHHHHHHHHHHHHHHHH--HHTTSCHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHCCSCHHHHHHHHHHHHH---
T ss_pred ccCCCCHHHHHHHHHHHHHHHH--HHhcCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhCcCHHHHHHHHHHHHHH---
Confidence 4566789999999999999999 99999999999999999999999999999999999999988865434434443
Q ss_pred HHHHhhHHhcC-ccCCCCCCceeEEEeeeeeeE-----------------------------------------------
Q 011130 176 YYAGWADKIQG-LTAPADGPYHVQTLHEPIGVA----------------------------------------------- 207 (493)
Q Consensus 176 ~~a~~~~~~~~-~~~~~~~~~~~~~~~~PlGVv----------------------------------------------- 207 (493)
++..+++.... ...+.+.+...+..++|+|||
T Consensus 80 ~~~~~~~~~~~~g~~~~~~~~~~~~~~~P~GVv~~I~P~N~P~~~~~~~~~~ALaaGN~VVlKps~~ap~t~~~l~~ll~ 159 (464)
T 3k9d_A 80 HVYNYIKDMKTIGMLKEDNEKKVMEVAVPLGVVAGLIPSTNPTSTVIYKTLISIKAGNSIVFSPHPNALKAILETVRIIS 159 (464)
T ss_dssp HHHHHHTTCCCSEEEEEETTTTEEEEEEECCEEEEEECSSSHHHHHHHHHHHHHHTTCEEEEEECGGGHHHHHHHHHHHH
T ss_pred HHHHhhhcccccceeccCCCceeEEEEecceEEEEECCCcChHHHHHHHHHHHHHhCCeEEEECCcchHHHHHHHHHHHH
Confidence 33333332211 111223455678899999998
Q ss_pred ----------eEEEeeeCCccchhhhhhccccccEEEEecCcHHHHHHHHHHhhcCCCceeEecC-CCCceEEccCCCHH
Q 011130 208 ----------GVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLAAKSNLKPVTLELG-GKSPFIVCEDADVD 276 (493)
Q Consensus 208 ----------gvv~vv~~~~~~~~~~L~~~~~v~~v~fTGs~~~g~~v~~~a~~~~~~pv~lelg-G~~p~iV~~daDl~ 276 (493)
|++|+|++++.+.++.|+.||+||+|+||||+.+ ++.++. ++||+ +|+| ||+|+||++|||++
T Consensus 160 ~~~~~aG~P~gvv~vv~g~~~~~~~~L~~~~~vd~I~fTGs~~v----~~~a~~-~~kpv-lelG~G~~p~iV~~dADl~ 233 (464)
T 3k9d_A 160 EAAEKAGCPKGAISCMTVPTIQGTDQLMKHKDTAVILATGGSAM----VKAAYS-SGTPA-IGVGPGNGPAFIERSANIP 233 (464)
T ss_dssp HHHHHTTCCTTSEEECSSCCHHHHHHHHHCTTEEEEEECSCHHH----HHHHTT-SSSCE-EEBCCCCCEEEECTTSCHH
T ss_pred HHHHHhCCCCCeEEEEeCCCHHHHHHHHhCCCCCEEEEeCChHH----HHHHHh-cCCcE-EeeCCCCCeEEECCCCCHH
Confidence 8899999988889999999999999999999985 444555 88999 7888 99999999999999
Q ss_pred HHHHHHHHHHHhhcCCcccCCCeeEecchhHHHHHHHHHHHH-------hhcccCCCC-CCCCccccCCCHHHHHHHHHH
Q 011130 277 KAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFVEKANALA-------MKRVVGDPF-KGGIQQGPQIDSEQFEKILKY 348 (493)
Q Consensus 277 ~aa~~i~~~~~~~~GQ~C~a~~~v~V~~~i~d~f~~~l~~~~-------~~~~vg~p~-~~~~~~gpli~~~~~~~~~~~ 348 (493)
.|++.|++++|+|+||.|+++++||||+++||+|+++|+++. +.+++|+|. ++++++||+++.++++++.++
T Consensus 234 ~Aa~~i~~~~~~n~Gq~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~~~~~~~~~g~~~~~~~~~~gp~i~~~~~~~i~~~ 313 (464)
T 3k9d_A 234 RAVKHILDSKTFDNGTICASEQSVVVERVNKEAVIAEFRKQGAHFLSDAEAVQLGKFILRPNGSMNPAIVGKSVQHIANL 313 (464)
T ss_dssp HHHHHHHHHHTGGGGCSTTSCCEEEEEHHHHHHHHHHHHHTTEEECCHHHHHHHHHHHBCTTSCBCGGGTTCCHHHHHHH
T ss_pred HHHHHHHHHHhcCCCCCCCCCcEEEEeHHHHHHHHHHHHHhhhhhcChhhhhhhcccccCCCCccCcccCHHHHHHHHHH
Confidence 999999999999999999999999999999999999999985 567889988 788999999999999999999
Q ss_pred HHHHHhCCCEEEeCCcccCCCCceeeceEEecCCCCccccccccccceEEEEEeCCHHHHH----HHHHcCCCCcEEEEe
Q 011130 349 IRSGVDGGAKLETGGERLGAKGYYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYKDLDEVI----QRSNASQYGLAAGVF 424 (493)
Q Consensus 349 i~~a~~~ga~v~~gg~~~~~~g~~~~Ptvl~~~~~~~~i~~~E~fgPvl~v~~~~~~~eai----~~~n~~~~gl~a~v~ 424 (493)
++.++.+|+++++||.. ++++++++. +|+||||++|++|+|+|||| +++|+++|||+++||
T Consensus 314 ~~~a~~~ga~vl~gg~~--------------~v~~~~~~~-~E~fgPVl~v~~~~~~~eAi~~ai~~~n~~~~gl~a~i~ 378 (464)
T 3k9d_A 314 AGLTVPADARVLIAEET--------------KVGAKIPYS-REKLAPILAFYTAETWQEACELSMDILYHEGAGHTLIIH 378 (464)
T ss_dssp TTCCCCTTCCEEEEECC--------------CCSTTCGGG-SCCCSSEEEEEEESSHHHHHHHHHHHHHHTTTEEEEEEE
T ss_pred hhhhhcCCCEEEEcCCC--------------CCCCCCccc-ccccCceEEEEEeCCHHHHHHHHHHHHhcCCCCCeEEEE
Confidence 99888899999999863 456777765 89999999999999999997 799999999999999
Q ss_pred cCCHHHHHHHHHhcceeEEEECCcCC---------CCCCCCccCCCCCCCCCcchHHHHHhhhhceEEEEeCCC
Q 011130 425 THNLDTANTLMRALRVGSVWINCFDV---------FDAAIPFGGYKQSGQGREKGSYSLSNYLQVKAVVTALKN 489 (493)
Q Consensus 425 t~d~~~~~~~~~~l~~g~V~VN~~~~---------~~~~~pfGG~~~SG~G~~~g~~~l~~~~~~k~v~~~~~~ 489 (493)
|+|.+.+++|++++++|+|+||++.. ..+.+|||| +.+|.|.++|..++++|++.|+|....+.
T Consensus 379 t~d~~~a~~~~~~l~~G~v~vN~~~~~~~~g~~~~~~~~~~~G~-G~~G~g~~~~~~~~~~~~~~k~v~~~~~~ 451 (464)
T 3k9d_A 379 SEDKEIIREFALKKPVSRLLVNTPGALGGIGATTNLVPALTLGC-GAVGGSSSSDNIGPENLFNIRRIATGVLE 451 (464)
T ss_dssp CSCHHHHHHHHHHSSEEEEEESSCHHHHHTTSSSSSCCCSCBBC-TGGGTCSCCSBCCGGGSEEEEEEEECCCC
T ss_pred eCCHHHHHHHHHhCCEeEEEEECCccccccccCCCCCccccccC-cCCCCCcCCCCCCHHHheEEEEEEecCCc
Confidence 99999999999999999999999764 468899998 77899999999999999999999888654
No 49
>1vlu_A Gamma-glutamyl phosphate reductase; YOR323C, structural GENO JCSG, protein structure initiative, PSI, joint center for S genomics; 2.29A {Saccharomyces cerevisiae} SCOP: c.82.1.1
Probab=100.00 E-value=4.8e-65 Score=532.43 Aligned_cols=344 Identities=17% Similarity=0.167 Sum_probs=275.5
Q ss_pred HHHHHHHHHHHHccCCCCCCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCCh----hhhhhccHHH-HHHHHHHHH
Q 011130 104 DVNRAVSAARKAFDEGPWPRMTAYERSKIILRFADLLERHNDEIAALETWDNGKPF----EQSAQTEVPM-TTRLFRYYA 178 (493)
Q Consensus 104 ~v~~av~~A~~A~~~~~w~~~~~~~R~~iL~~la~~l~~~~~ela~~~~~e~Gk~~----~~a~~~Ev~~-~~~~l~~~a 178 (493)
.+++++++|++||+ .|+.++..+|.++|++++++|+++.++|++++++|+|||. .++...|+.. ++..++|++
T Consensus 15 ~~~~av~aA~~A~~--~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~~g~~ea~~~ev~~~~~~~~~~~a 92 (468)
T 1vlu_A 15 SSQQIAKNARKAGN--ILKTISNEGRSDILYKIHDALKANAHAIEEANKIDLAVAKETGLADSLLKRLDLFKGDKFEVML 92 (468)
T ss_dssp HHHHHHHHHHHHHH--HHTTSCHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHSSCCHHHHHHHCTTSTTHHHHHH
T ss_pred hHHHHHHHHHHHHH--HHhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcccccccchHHHHHHhhhhHHHHHHHH
Confidence 58999999999999 9999999999999999999999999999999999999998 7775458888 889999999
Q ss_pred HhhHHhc------CccCCC---CCCceeEEEeeeeeeE------------------------------------------
Q 011130 179 GWADKIQ------GLTAPA---DGPYHVQTLHEPIGVA------------------------------------------ 207 (493)
Q Consensus 179 ~~~~~~~------~~~~~~---~~~~~~~~~~~PlGVv------------------------------------------ 207 (493)
++++++. +...+. +.+...++.++|+|||
T Consensus 93 ~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~P~GVV~~I~pwNP~~~~~~~~~ALaaGN~VVlKps~~tp~t~~~l~~ 172 (468)
T 1vlu_A 93 QGIKDVAELEDPVGKVKMARELDDGLTLYQVTAPVGVLLVIFESRPEVIANITALSIKSGNAAILKGGKESVNTFREMAK 172 (468)
T ss_dssp HHHHHHHHSCCSSSCEEEEEEEETTEEEEEEEEECCEEEEEESSCTHHHHHHHHHHHHHTCEEEEECCGGGHHHHHHHHH
T ss_pred HHHHHHhhcCCCCCeecccccCCCCceeEEEecCcceEEEEeccChHHHHHHHHHHHHcCCEEEEEcCCccHHHHHHHHH
Confidence 8887765 333221 1234568899999998
Q ss_pred -----------------eEEEeeeCCccchhhhhhccccccEEEEecCcHHHHHHHHHHhhcCCCceeEecCCCCceEEc
Q 011130 208 -----------------GVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLAAKSNLKPVTLELGGKSPFIVC 270 (493)
Q Consensus 208 -----------------gvv~vv~~~~~~~~~~L~~~~~v~~v~fTGs~~~g~~v~~~a~~~~~~pv~lelgG~~p~iV~ 270 (493)
|++|+|+ .++++++.|..||+||+|+||||+.+|+.|++.+ +||+++|||||||+||+
T Consensus 173 l~~~aL~e~~~~aGlP~gvv~vv~-~~~~~g~~L~~~p~vd~I~fTGS~~~g~~i~~~a----~kpv~lElGGk~p~iV~ 247 (468)
T 1vlu_A 173 IVNDTIAQFQSETGVPVGSVQLIE-TRQDVSDLLDQDEYIDLVVPRGSNALVRKIKDTT----KIPVLGHADGICSIYLD 247 (468)
T ss_dssp HHHHHHHHHHHHHCCCTTSEEECC-CC--CGGGGGCTTTCCEEEEESCHHHHHHHHHTC----CSCBTTBCSCCEEEEEC
T ss_pred HHHHHHHhhchhcCCCCCcEEEEC-CHHHHHHHHhhCCCcCEEEEECCHHHHHHHHHhc----CCCEEeecCCccceEEC
Confidence 5688898 6667899999999999999999999999999865 58999999999999999
Q ss_pred cCCCHHHHHHHHHHHHHhhcCCcccCCCeeEecchhHHHHHHHHHHHHhhccc---CCCCCCCCccccCCCHHHHHHHHH
Q 011130 271 EDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMKRVV---GDPFKGGIQQGPQIDSEQFEKILK 347 (493)
Q Consensus 271 ~daDl~~aa~~i~~~~~~~~GQ~C~a~~~v~V~~~i~d~f~~~l~~~~~~~~v---g~p~~~~~~~gpli~~~~~~~~~~ 347 (493)
+|||++.|++.+++++|.|+| .|++++|||||+++ |+|+++|+++++++++ |||.+ .+
T Consensus 248 ~dADl~~Aa~~i~~~~~~n~G-~C~a~~rvlV~~~i-d~f~~~l~~~~~~~~v~~~Gdp~~-----------------~~ 308 (468)
T 1vlu_A 248 EDADLIKAKRISLDAKTNYPA-GCNAMETLLINPKF-SKWWEVLENLTLEGGVTIHATKDL-----------------KT 308 (468)
T ss_dssp TTCCHHHHHHHHHHTTCC-----CCCCEEEEECTTS-TTHHHHHHHHHHHHCCCBEECHHH-----------------HH
T ss_pred CCCCHHHHHHHHHHHhcCCCC-cCCcCcEEEEECCH-HHHHHHHHHHHHhcCCeecCCHHH-----------------hc
Confidence 999999999999999999999 99999999999999 9999999999999987 87643 34
Q ss_pred H-HHHHHhCCCEEEeCCcccCCCCceeeceEEecCCCCccccccccccceEEEEEeCCHHHHHHHHHcCCCCcEEEEecC
Q 011130 348 Y-IRSGVDGGAKLETGGERLGAKGYYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYKDLDEVIQRSNASQYGLAAGVFTH 426 (493)
Q Consensus 348 ~-i~~a~~~ga~v~~gg~~~~~~g~~~~Ptvl~~~~~~~~i~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~a~v~t~ 426 (493)
+ |++++ ++++||. | +.||++ ++++|++++||+||||++|++|+|+||||+++|+++|||+++|||+
T Consensus 309 ~~i~~a~----~~~~gG~-----g--~~Ptvl--v~~~~~i~~eEiFGPVl~v~~~~~~deAi~~aN~~~~gL~a~v~t~ 375 (468)
T 1vlu_A 309 AYFDKLN----ELGKLTE-----A--IQCKTV--DADEEQDFDKEFLSLDLAAKFVTSTESAIQHINTHSSRHTDAIVTE 375 (468)
T ss_dssp HHHHHHH----HHTCCCH-----H--HHTTBC---------------CCCCEEEECCSHHHHHHHHTTSCSSCEEEEECS
T ss_pred ccccccc----eeeccCC-----C--CCCcee--eCCCchhhhcCccCceEEEEEeCCHHHHHHHHHhCCCCceEEEEeC
Confidence 5 66664 3667775 4 689887 7889999999999999999999999999999999999999999999
Q ss_pred CHHHHHHHHHhcceeEEEECCcCCCCCCCCcc-----CCCCCCCCCcchHHHHHhhhhceEEEEeC
Q 011130 427 NLDTANTLMRALRVGSVWINCFDVFDAAIPFG-----GYKQSGQGREKGSYSLSNYLQVKAVVTAL 487 (493)
Q Consensus 427 d~~~~~~~~~~l~~g~V~VN~~~~~~~~~pfG-----G~~~SG~G~~~g~~~l~~~~~~k~v~~~~ 487 (493)
|.+.++++++++++|+|+||++....+..||| |+|.||+|++ |.+++++|++.|+|+...
T Consensus 376 d~~~a~~~~~~l~aG~V~vN~~~~~~~~~pfG~Gg~~G~~~SG~g~~-G~~gl~~f~~~K~v~~~~ 440 (468)
T 1vlu_A 376 NKANAEKFMKGVDSSGVYWNASTRFADGFRYGFGAEVGISTSKIHAR-GPVGLDGLVSYQYQIRGD 440 (468)
T ss_dssp CHHHHHHHHHHCCCSEEEESSCGGGCC-----------------------CCSGGGEEEEEEEECS
T ss_pred CHHHHHHHHHhCCeeEEEEcCCCCCCCCCCCCCCCCcceecCCCCCC-cchHHHHhcceEEEEECC
Confidence 99999999999999999999987777889999 9999999999 999999999999998863
No 50
>1o20_A Gamma-glutamyl phosphate reductase; TM0293, structural genom JCSG, PSI, protein structure initiative, joint center for S genomics; 2.00A {Thermotoga maritima} SCOP: c.82.1.1
Probab=100.00 E-value=1.7e-63 Score=516.16 Aligned_cols=337 Identities=20% Similarity=0.229 Sum_probs=295.6
Q ss_pred CHHHHHHHHHHHHHHccCCCCCCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCCh----hhhhh-------ccHHH
Q 011130 101 EAEDVNRAVSAARKAFDEGPWPRMTAYERSKIILRFADLLERHNDEIAALETWDNGKPF----EQSAQ-------TEVPM 169 (493)
Q Consensus 101 ~~~~v~~av~~A~~A~~~~~w~~~~~~~R~~iL~~la~~l~~~~~ela~~~~~e~Gk~~----~~a~~-------~Ev~~ 169 (493)
.-+++++++++|++||+ .|+++|..+|.++|++++++|++|.++|++++++|+||+. .++.. .|+..
T Consensus 12 ~~~~~~~av~aA~~A~~--~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~gk~~~~g~~ea~~~~~~~~~~ev~~ 89 (427)
T 1o20_A 12 HMDELLEKAKKVREAWD--VLRNATTREKNKAIKKIAEKLDERRKEILEANRIDVEKARERGVKESLVDRLALNDKRIDE 89 (427)
T ss_dssp --CHHHHHHHHHHHHHH--HHTTCCHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTTCCHHHHHHHCCCHHHHHH
T ss_pred hhHHHHHHHHHHHHHHH--HHhhCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhhccccccccHHHHHHHhcCHHHHHH
Confidence 34689999999999999 9999999999999999999999999999999999999985 45431 48999
Q ss_pred HHHHHHHHHHhhHHhcCccCCC---CCCceeEEEeeeeeeE---------------------------------------
Q 011130 170 TTRLFRYYAGWADKIQGLTAPA---DGPYHVQTLHEPIGVA--------------------------------------- 207 (493)
Q Consensus 170 ~~~~l~~~a~~~~~~~~~~~~~---~~~~~~~~~~~PlGVv--------------------------------------- 207 (493)
+++.+++++++.++ .+...+. ..+...++.++|+|||
T Consensus 90 ~~~~l~~~a~~~~~-~g~~~~~~~~~~~~~~~~~~~P~GVV~~I~p~p~~~~~~~~~~ALaaGNtVVlKps~~tp~t~~~ 168 (427)
T 1o20_A 90 MIKACETVIGLKDP-VGEVIDSWVREDGLRIARVRVPIGPIGIIYESRPNVTVETTILALKSGNTILLRGGSDALNSNKA 168 (427)
T ss_dssp HHHHHHHHHHSCCC-TTCEEEEEECTTSCEEEEEEEECCCEEEECCSCTHHHHHHHHHHHHTTCCEEEECCGGGHHHHHH
T ss_pred HHHHHHHHHhcccc-cCccccccccCCCceeEEEeecceeEEEEecCChHHHHHHHHHHHHcCCEEEEECCHhHHHHHHH
Confidence 99999999998765 3433221 2234568899999999
Q ss_pred ----------------eEEEeeeCC-ccchhhhhhccccccEEEEecCcHHHHHHHHHHhhcCCCceeEecCCCCceEEc
Q 011130 208 ----------------GVLNIVSGY-GPTAGAALASHMEVDKLAFTGSTTTGKIVLQLAAKSNLKPVTLELGGKSPFIVC 270 (493)
Q Consensus 208 ----------------gvv~vv~~~-~~~~~~~L~~~~~v~~v~fTGs~~~g~~v~~~a~~~~~~pv~lelgG~~p~iV~ 270 (493)
|++|+|++. +.++++.|..||+||+|+||||+.+|+.|++.+ +||+++|||||||+||+
T Consensus 169 l~~l~~~al~eaGlP~gvv~vv~g~~~~~~~~~L~~~~~v~~I~fTGS~~~G~~i~~~a----~~~v~lELGGk~p~iV~ 244 (427)
T 1o20_A 169 IVSAIREALKETEIPESSVEFIENTDRSLVLEMIRLREYLSLVIPRGGYGLISFVRDNA----TVPVLETGVGNCHIFVD 244 (427)
T ss_dssp HHHHHHHHHTTSSSCGGGEEECCCCCTHHHHHHTTCTTTCSEEEECSCHHHHHHHHHHC----SSCBCCCCCCCEEEEEC
T ss_pred HHHHHHHHHHHcCCCcccEEEecCCChHHHHHHHhCCCCccEEEeCCChHHHHHHHHhc----CCCEEEecCCCceEEEe
Confidence 889999984 456788999999999999999999999999876 48999999999999999
Q ss_pred cCCCHHHHHHHHHHHHHhhcCCcccCCCeeEecchhHHHHHHHHHHHHhhcccCCCCCCCCccccCCCHHHHHHHHHHHH
Q 011130 271 EDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMKRVVGDPFKGGIQQGPQIDSEQFEKILKYIR 350 (493)
Q Consensus 271 ~daDl~~aa~~i~~~~~~~~GQ~C~a~~~v~V~~~i~d~f~~~l~~~~~~~~vg~p~~~~~~~gpli~~~~~~~~~~~i~ 350 (493)
+|||+|.|++.+++++|.|+| .|++++|||||+++||+|+++|++++++++++
T Consensus 245 ~dADl~~Aa~~i~~~~f~n~G-~C~a~~rv~V~~~i~d~f~~~l~~~~~~~~~~-------------------------- 297 (427)
T 1o20_A 245 ESADLKKAVPVIINAKTQRPG-TCNAAEKLLVHEKIAKEFLPVIVEELRKHGVE-------------------------- 297 (427)
T ss_dssp TTSCHHHHHHHHHHHHHSCTT-STTSEEEEEEEHHHHHHHHHHHHHHHHHTTCE--------------------------
T ss_pred CCCCHHHHHHHHHHHhccCCC-CCCCccEEEEehhhHHHHHHHHHHHHHHcCCe--------------------------
Confidence 999999999999999999999 99999999999999999999999999887642
Q ss_pred HHHhCCCEEEeCCcccCCCCceeeceEEecCCCCccccccccccceEEEEEeCCHHHHHHHHHcCCCCcEEEEecCCHHH
Q 011130 351 SGVDGGAKLETGGERLGAKGYYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYKDLDEVIQRSNASQYGLAAGVFTHNLDT 430 (493)
Q Consensus 351 ~a~~~ga~v~~gg~~~~~~g~~~~Ptvl~~~~~~~~i~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~a~v~t~d~~~ 430 (493)
+.||... .+ |+ ||| ++.++.+++||+||||++|++|+|+||||+++|+++|||+++|||+|.+.
T Consensus 298 ---------~~gg~~~--~~-~~-Ptl---~~~~~~i~~eEiFGPVl~v~~~~~~deAi~~aN~~~~gL~a~v~t~d~~~ 361 (427)
T 1o20_A 298 ---------VRGCEKT--RE-IV-PDV---VPATEDDWPTEYLDLIIAIKVVKNVDEAIEHIKKYSTGHSESILTENYSN 361 (427)
T ss_dssp ---------EEECHHH--HH-HS-TTS---EECCGGGTTCCCCSSEEEEEEESSHHHHHHHHHHHCCSSEEEEECSCHHH
T ss_pred ---------eecChhh--hh-hC-Ccc---cCCCcchhhcccccceEEEEEECCHHHHHHHHHhCCCCCeEEEEeCCHHH
Confidence 2233321 12 33 885 24578999999999999999999999999999999999999999999999
Q ss_pred HHHHHHhcceeEEEECCcCCCCCCCCccCCCCCCCC----CcchHHHHHhhhhceEEEEeC
Q 011130 431 ANTLMRALRVGSVWINCFDVFDAAIPFGGYKQSGQG----REKGSYSLSNYLQVKAVVTAL 487 (493)
Q Consensus 431 ~~~~~~~l~~g~V~VN~~~~~~~~~pfGG~~~SG~G----~~~g~~~l~~~~~~k~v~~~~ 487 (493)
++++++++++|+|+||++....+.+||||.|+||+| +++|++++++|++.|+|+...
T Consensus 362 a~~~~~~l~~G~V~iN~~~~~~~~~pfGg~~~SG~g~~~~~~~g~~gl~~~~~~k~v~~~~ 422 (427)
T 1o20_A 362 AKKFVSEIDAAAVYVNASTRFTDGGQFGFGAEIGISTQRFHARGPVGLRELTTYKFVVLGE 422 (427)
T ss_dssp HHHHHHHCCSSEEEESSCGGGCSTTTTTCSCCSCEECSSSSCCEECCTGGGEEEEEEEECS
T ss_pred HHHHHHhCCccEEEECCCCccCCCCCCCCcccccccCCcccCCChHHHHHHhceEEEEECC
Confidence 999999999999999997777788999999999997 578999999999999998864
No 51
>4ghk_A Gamma-glutamyl phosphate reductase; structural genomics, niaid, national institute of allergy AN infectious diseases; 2.25A {Burkholderia thailandensis}
Probab=100.00 E-value=8.2e-63 Score=513.49 Aligned_cols=338 Identities=19% Similarity=0.205 Sum_probs=285.7
Q ss_pred HHHHHHHHHHHHHHccCCCCCCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCChh----hhhh-------ccHHHH
Q 011130 102 AEDVNRAVSAARKAFDEGPWPRMTAYERSKIILRFADLLERHNDEIAALETWDNGKPFE----QSAQ-------TEVPMT 170 (493)
Q Consensus 102 ~~~v~~av~~A~~A~~~~~w~~~~~~~R~~iL~~la~~l~~~~~ela~~~~~e~Gk~~~----~a~~-------~Ev~~~ 170 (493)
.+|+++++++|++||+ .|+.+|..+|.++|++++++|+++.++|++++++|+||+.. ++.. .|+..+
T Consensus 25 ~~~v~~av~~A~~A~~--~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~gk~~~~g~~ea~~~~~~~~~~~v~~~ 102 (444)
T 4ghk_A 25 DQYMTDVGRRARRASR--SIARASTAAKNAALEAVARAIERDAGALKAANARDVARAKDKGLDAAFVDRLTLSDKALKTM 102 (444)
T ss_dssp HHHHHHHHHHHHHHHH--HHHHCCHHHHHHHHHHHHHHHHHSHHHHHHHHHHHHCC------CCSHHHHHCCCTTHHHHH
T ss_pred HHHHHHHHHHHHHHHH--HhhhCCHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHhhhhhccchHHHHHHhhccHHHHHHH
Confidence 5789999999999999 99999999999999999999999999999999999999853 5442 378889
Q ss_pred HHHHHHHHHhhHHhcCccCCC---CCCceeEEEeeeeeeE----------------------------------------
Q 011130 171 TRLFRYYAGWADKIQGLTAPA---DGPYHVQTLHEPIGVA---------------------------------------- 207 (493)
Q Consensus 171 ~~~l~~~a~~~~~~~~~~~~~---~~~~~~~~~~~PlGVv---------------------------------------- 207 (493)
++.+++++.+++.. +...+. ..+...++.++|+|||
T Consensus 103 ~~~l~~~a~~~~~~-g~~~~~~~~~~~~~~~~~~~P~GVV~~I~p~nP~~~~~~~~~ALaaGN~VVlKps~~tp~t~~~l 181 (444)
T 4ghk_A 103 VEGLRQVATLPDPI-GEMSNLKYRPSGIQVGQMRVPLGVIGIIYESRPNVTIDAAALCLKSGNATILRGGSEALESNTAL 181 (444)
T ss_dssp HHHHHHHHHSCCCT-TCEEEEEECTTSCEEEEEEEECSEEEEECCSCHHHHHHHHHHHHHTTCEEEEECCGGGHHHHHHH
T ss_pred HHHHHHHHhhcccc-CccCCcccCCCCccceEEEeccEEEEEEeCCCcHHHHHHHHHHHHcCCEEEEECCccchHHHHHH
Confidence 99999999887643 333221 2345678999999998
Q ss_pred ---------------eEEEeeeCCcc-chhhhhhccccccEEEEecCcHHHHHHHHHHhhcCCCceeEecCCCCceEEcc
Q 011130 208 ---------------GVLNIVSGYGP-TAGAALASHMEVDKLAFTGSTTTGKIVLQLAAKSNLKPVTLELGGKSPFIVCE 271 (493)
Q Consensus 208 ---------------gvv~vv~~~~~-~~~~~L~~~~~v~~v~fTGs~~~g~~v~~~a~~~~~~pv~lelgG~~p~iV~~ 271 (493)
|++|+|++.+. ++++.|..||+||+|+||||+.+|+.|++.+ +||+++|||||||+||++
T Consensus 182 ~~l~~~~l~~aGlP~gvv~vv~g~~~~~~~~~L~~~p~vd~V~fTGs~~vg~~v~~~a----~~pv~lELGGk~p~IV~~ 257 (444)
T 4ghk_A 182 AKLIGEGLAEAGLPQDTVQVVETADRAAVGRLITMTEYVDVIVPRGGKSLIERLINEA----RVPMIKHLDGICHVYVDD 257 (444)
T ss_dssp HHHHHHHHHHTTCCGGGEEECCCCCTHHHHHHTTCTTTCSEEEECSCHHHHHHHHHHC----CSCBCCCCCCCCEEEECT
T ss_pred HHHHHHHHHHcCCCcccEEEEeCCCHHHHHHHHhcCCCccEEEEECcHHHHHHHHHhC----CCCEEEEcCCcCeEEECC
Confidence 88999998665 5788899999999999999999999998764 589999999999999999
Q ss_pred CCCHHHHHHHHHHHHHhhcCCcccCCCeeEecchhHHHHHHHHHHHHhhccc---CCCCCCCCccccCCCHHHHHHHHHH
Q 011130 272 DADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMKRVV---GDPFKGGIQQGPQIDSEQFEKILKY 348 (493)
Q Consensus 272 daDl~~aa~~i~~~~~~~~GQ~C~a~~~v~V~~~i~d~f~~~l~~~~~~~~v---g~p~~~~~~~gpli~~~~~~~~~~~ 348 (493)
|||++.|++.+++++|.|+| .|++++|||||++++|+|+++|+++++++++ |||. ..++
T Consensus 258 dADl~~Aa~~i~~~~~~n~G-~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~~~~~g~p~-----------------~~~~ 319 (444)
T 4ghk_A 258 RASVTKALTVCDNAKTHRYG-TCNTMETLLVARGIAPAVLSPLGRLYREKGVELRVDAD-----------------ARAV 319 (444)
T ss_dssp TCCHHHHHHHCC----------CCCCCEEEEEGGGHHHHHHHHHHHHHHTTCEEEECHH-----------------HHHH
T ss_pred CCCHHHHHHHHHHHhcCCCc-ccCcCceEEEeHHHHHHHHHHHHHHHHHcCCeecCCHH-----------------HHHH
Confidence 99999999999999999999 9999999999999999999999999999988 7653 2456
Q ss_pred HHHHHhCCCEEEeCCcccCCCCceeeceEEecCCCCccccccccccceEEEEEeCCHHHHHHHHHcCCCCcEEEEecCCH
Q 011130 349 IRSGVDGGAKLETGGERLGAKGYYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYKDLDEVIQRSNASQYGLAAGVFTHNL 428 (493)
Q Consensus 349 i~~a~~~ga~v~~gg~~~~~~g~~~~Ptvl~~~~~~~~i~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~a~v~t~d~ 428 (493)
|+++. .| ++ +++++++++||+||||++|++|+|+||||+++|+++|||++||||+|.
T Consensus 320 i~~a~---------------~G------~~--~~~~~~~~~eEiFGPVl~v~~~~~~deAi~~aN~~~~gL~a~v~t~d~ 376 (444)
T 4ghk_A 320 LEAAG---------------VG------PL--VDATDEDWRTEYLAPVLAIKIVDGIDAAIEHINEYGSHHTDAIVTEDH 376 (444)
T ss_dssp HHHTT---------------CC------CC--EECCSGGGTCC---CEEEEEEESSHHHHHHHHHHHSCSSEEEEECSBH
T ss_pred HHhcc---------------cC------cc--cCCCchhhhccccCceEEEEEeCCHHHHHHHHHhCCCCceEEEEeCCH
Confidence 66542 12 11 245789999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHhcceeEEEECCcCCCCCCCCccCCCCCCCC----CcchHHHHHhhhhceEEEEeC
Q 011130 429 DTANTLMRALRVGSVWINCFDVFDAAIPFGGYKQSGQG----REKGSYSLSNYLQVKAVVTAL 487 (493)
Q Consensus 429 ~~~~~~~~~l~~g~V~VN~~~~~~~~~pfGG~~~SG~G----~~~g~~~l~~~~~~k~v~~~~ 487 (493)
+.++++++++++|+|+||+++.+.+..||||.++||+| +++|++++++|++.|+|++..
T Consensus 377 ~~a~~~a~~l~aG~V~vN~~~~~~~~~pfGg~~~sG~g~~~~~~~G~~gl~~~t~~K~v~~~~ 439 (444)
T 4ghk_A 377 DRAMRFLREVDSASVMVNASTRFADGFEFGLGAEIGISNDKLHARGPVGLEGLTSLKYVVLGH 439 (444)
T ss_dssp HHHHHHHHHCCSSEEEEEECGGGCSTTTTTCSCCSEEECCSSSCCEEECGGGGEEEEEEEEEE
T ss_pred HHHHHHHHhCCcceEEEcCCCccCCCCCcCCcccccccCCcccCCChhHHHhhceEEEEEECC
Confidence 99999999999999999998878889999999999987 688999999999999998764
No 52
>3my7_A Alcohol dehydrogenase/acetaldehyde dehydrogenase; ACDH, PSI, MCSG, structural genomics, midwest center for STR genomics; 2.30A {Vibrio parahaemolyticus}
Probab=100.00 E-value=4.2e-61 Score=502.01 Aligned_cols=361 Identities=17% Similarity=0.242 Sum_probs=292.4
Q ss_pred EecCCHHHHHHHHHHHHHHccCCCCCCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCChhhhhhccHHHHHHHH-H
Q 011130 97 VAEGEAEDVNRAVSAARKAFDEGPWPRMTAYERSKIILRFADLLERHNDEIAALETWDNGKPFEQSAQTEVPMTTRLF-R 175 (493)
Q Consensus 97 v~~~~~~~v~~av~~A~~A~~~~~w~~~~~~~R~~iL~~la~~l~~~~~ela~~~~~e~Gk~~~~a~~~Ev~~~~~~l-~ 175 (493)
++.++.+|+++++++|++||+ .|+++|.++|.++|++++++|+++.++|++++++|+|||..+++..|+..+.+.+ +
T Consensus 1 ~~~a~~~~v~~av~~A~~A~~--~w~~~~~~~R~~il~~~a~~l~~~~~~la~~~~~e~Gk~~~e~~~~~~~~a~~~~~~ 78 (452)
T 3my7_A 1 MPVTNMAELDAMIARVKKAQE--EFATYSQEQVDKIFRAASLAANQARIPLAQQAVEESGMGIVEDKVIKNHFASEFIYN 78 (452)
T ss_dssp -CCSSHHHHHHHHHHHHHHHH--HHTTCCHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHCCSCHHHHHHHHHHHHHHHHH
T ss_pred CCCCCHHHHHHHHHHHHHHHH--HHhcCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHH
Confidence 467899999999999999999 9999999999999999999999999999999999999999998755666666665 3
Q ss_pred HHHHhhHHhcCccCCCCCCceeEEEeeeeeeE------------------------------------------------
Q 011130 176 YYAGWADKIQGLTAPADGPYHVQTLHEPIGVA------------------------------------------------ 207 (493)
Q Consensus 176 ~~a~~~~~~~~~~~~~~~~~~~~~~~~PlGVv------------------------------------------------ 207 (493)
+++.. +..+ ..+.+.....+..++|+|||
T Consensus 79 ~~~~~--~~~g-~~~~~~~~~~~~~~~P~GVv~~I~P~N~P~~~~~~k~~~ALaaGN~VVlKps~~tp~~~~~~~~~~~~ 155 (452)
T 3my7_A 79 KYKDE--QTCG-ILEEDDNLGTMTIAEPVGIICGIVPTTNPTSTAIFKSLISLKTRNGIIFSPHPRAKNSTNDAAKLVLD 155 (452)
T ss_dssp HHTTC--CCSE-EC-------CEEEEEECCEEEEEECTTSTTHHHHHHHHHHHHTTCEEEEEECGGGHHHHHHHHHHHHH
T ss_pred Hhhhc--cccc-cccCCCCCceEEEecCceEEEEEcCCCChHHHHHHHHHHHHhcCCeEEEEcCCCchHHHHHHHHHHHH
Confidence 44321 1111 12223344568899999998
Q ss_pred ---------eEEEeeeCCccchhhhhhccccccEEEEecCcHHHHHHHHHHhhcCCCceeEecCCCCceEEccCCCHHHH
Q 011130 208 ---------GVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLAAKSNLKPVTLELGGKSPFIVCEDADVDKA 278 (493)
Q Consensus 208 ---------gvv~vv~~~~~~~~~~L~~~~~v~~v~fTGs~~~g~~v~~~a~~~~~~pv~lelgG~~p~iV~~daDl~~a 278 (493)
|++|+|++++.++++.|+.||+|++|+||||+.+++ .++. ++||+++|+|||+|+||++|||++.|
T Consensus 156 a~~~aG~P~gvv~~v~g~~~~~~~~L~~~p~v~~V~fTGs~~~~~----~a~~-~~kp~~~e~gG~~p~iV~~dADl~~A 230 (452)
T 3my7_A 156 AAVAAGAPKDIIGWIDQPSVELSNALMKHDDIALILATGGPGMVK----AAYS-SGKPAIGVGAGNVPVVIDETADIKRA 230 (452)
T ss_dssp HHHHTTCCTTSEEECSSCCHHHHHHHHHCTTCCEEEECSCHHHHH----HHHT-SSSCEEECC--CEEEEECTTSCHHHH
T ss_pred HHHHcCCCcCcEEEEcCCCHHHHHHHHhCCCccEEEEECcHHHHH----HHHh-cCCCEEecCCCCCeEEEeCCCCHHHH
Confidence 889999998888999999999999999999998655 3444 78999999999999999999999999
Q ss_pred HHHHHHHHHhhcCCcccCCCeeEecchhHHHHHHHHHHHHhhcccCCCCCCCCccccCCCHHHHHHHHHHHHHHHhCCCE
Q 011130 279 AELAHYALFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMKRVVGDPFKGGIQQGPQIDSEQFEKILKYIRSGVDGGAK 358 (493)
Q Consensus 279 a~~i~~~~~~~~GQ~C~a~~~v~V~~~i~d~f~~~l~~~~~~~~vg~p~~~~~~~gpli~~~~~~~~~~~i~~a~~~ga~ 358 (493)
++.++.++|+|+||.|+++++||||+++||+|+++|+++ +||++++.+++++.++|+++...|++
T Consensus 231 a~~iv~s~~~~~GQ~C~a~~rv~V~~~i~d~f~~~l~~~---------------~gpli~~~~~~~v~~~i~~~~~~~a~ 295 (452)
T 3my7_A 231 VASVLMSKTFDNGVVCASEQAVIVVDEVYDEVKERFASH---------------KAHVLSKTDADKVRKVLLIDGALNAK 295 (452)
T ss_dssp HHHHHHGGGGGGGCCTTCEEEEEEEGGGHHHHHHHHHTT---------------TEEECCHHHHHHHHHHHEETTEECGG
T ss_pred HHHHHHHHhCCCCCccCCCcEEEEcHHHHHHHHHHHHHh---------------CCCcCCHHHHHHHHHHHHhhcccCCe
Confidence 999999999999999999999999999999999999874 49999999999999999876566777
Q ss_pred EEeCCccc---CCCCceeeceE-------EecCCCCccccccccccceEEEEEeCCHHHHHHHHHcCC----CCcEEEEe
Q 011130 359 LETGGERL---GAKGYYIKPTV-------FTGVKDDMLIAKDEIFGPVQSILKYKDLDEVIQRSNASQ----YGLAAGVF 424 (493)
Q Consensus 359 v~~gg~~~---~~~g~~~~Ptv-------l~~~~~~~~i~~~E~fgPvl~v~~~~~~~eai~~~n~~~----~gl~a~v~ 424 (493)
+ +||... ...|+|++||+ +.++.+++++.+ |+||||++|++|+|+||||+++|++. |||+++||
T Consensus 296 v-~G~~~~~~~~~~G~~v~pt~~vl~~~~~~~v~~~~~~~~-E~FgPVl~v~~~~~~~eAi~~an~~~~~~g~Glta~i~ 373 (452)
T 3my7_A 296 I-VGQPATAIAEMAGVKVPADTKVLIGEGLGKVSYDDAFAH-EKLSPTLGMFRADNFEDAVAQAVTMVEIGGIGHTSGLY 373 (452)
T ss_dssp G-TTCCHHHHHHHHTCCCCTTCCEEEEECSSSCCTTCGGGS-CCSSSEEEEEEESSHHHHHHHHHHHHHHHSSCCEEEEE
T ss_pred E-ecCccchhHHhCCceeCCCeeEEeeccccCCCCcchhhc-CccCcEEEEEEeCCHHHHHHHHHhcccccCCCCEEEEE
Confidence 6 466532 13589999997 667888999876 89999999999999999999999974 99999999
Q ss_pred cCCHHHHHH---HHHhcceeEEEECCcCCCCCCCCccCCCCC-----------CCC-----CcchHHHHHhhhhceEEEE
Q 011130 425 THNLDTANT---LMRALRVGSVWINCFDVFDAAIPFGGYKQS-----------GQG-----REKGSYSLSNYLQVKAVVT 485 (493)
Q Consensus 425 t~d~~~~~~---~~~~l~~g~V~VN~~~~~~~~~pfGG~~~S-----------G~G-----~~~g~~~l~~~~~~k~v~~ 485 (493)
|+|.+.+++ +++++++|+|+||+++. |||.|.. |.| ...+.-+..++.+.|+|..
T Consensus 374 t~d~~~a~~i~~~a~~l~~G~V~VN~~~~------~Gg~G~~~~f~~~~~~t~g~g~~Gg~~~~~nv~~~~l~n~~~v~~ 447 (452)
T 3my7_A 374 TNQDVNADRIRYFGDKMKTARILINIPTT------HGGIGDLYNFNVAPSLTLGCGSWGGNSISENVGPKHLINKKTVAK 447 (452)
T ss_dssp SCTTTCHHHHHHHHHHCCCSEEEESCCCC----------------------------------CCCCCGGGGEEEEEEEC
T ss_pred cCCHHHHHHHHHHHHhCCEEEEEECCCCC------CcccccccccCcCceEeeeccccCCCccCCCCChhHeeeeeEEEe
Confidence 999877777 99999999999999754 4443321 222 2333456778888898887
Q ss_pred eCCCC
Q 011130 486 ALKNP 490 (493)
Q Consensus 486 ~~~~~ 490 (493)
+.+|+
T Consensus 448 ~~~~~ 452 (452)
T 3my7_A 448 RAENM 452 (452)
T ss_dssp CC---
T ss_pred ecCCC
Confidence 76653
No 53
>4gic_A HDH, histidinol dehydrogenase; protein structure initiative, STR genomics, PSI-biology, NEW YORK structural genomics researc consortium; 2.05A {Methylococcus capsulatus}
Probab=89.73 E-value=17 Score=36.17 Aligned_cols=82 Identities=11% Similarity=0.189 Sum_probs=50.6
Q ss_pred EEEEeCCHHHHHHHHHcCCCCcEEEEecCCHHHHHHHHHhc-ceeEEEECCcCCC--CCC--CCccCCCCCCCCCcchHH
Q 011130 398 SILKYKDLDEVIQRSNASQYGLAAGVFTHNLDTANTLMRAL-RVGSVWINCFDVF--DAA--IPFGGYKQSGQGREKGSY 472 (493)
Q Consensus 398 ~v~~~~~~~eai~~~n~~~~gl~a~v~t~d~~~~~~~~~~l-~~g~V~VN~~~~~--~~~--~pfGG~~~SG~G~~~g~~ 472 (493)
.++.++|++|+++++|..-. -..-|.++|+. .+..++ .+|.|++..+... ..+ -|-.=.+.+|..|..+.-
T Consensus 313 ~ii~v~~~~ea~~~~N~~AP-EHLel~~~~~~---~~l~~i~nAGaIFlG~~tp~~~GDY~aG~NHvLPT~G~Ar~~sgL 388 (423)
T 4gic_A 313 GMILVDDLEQAAAVANRIAP-EHLELSVESPE---VLVESIRNAGAIFMGRYTAEALGDYCAGPNHVLPTSGTARFSSPL 388 (423)
T ss_dssp EEEECSSHHHHHHHHHHHCC-SEEEEESSCHH---HHGGGCCCCSEEEEC----------------CCCCTTGGGTCCCC
T ss_pred eEEEEeehHHHHHHHHhhCh-HHhhhhhCCHH---HHHhhCcEeceeecCCCCchhhhhcCcCCCccCCCCCcccccCCC
Confidence 45678999999999998432 35678888875 566777 4999999876431 111 111113345556666666
Q ss_pred HHHhhhhceEE
Q 011130 473 SLSNYLQVKAV 483 (493)
Q Consensus 473 ~l~~~~~~k~v 483 (493)
+.+.|++.-++
T Consensus 389 sv~~F~K~~s~ 399 (423)
T 4gic_A 389 GVYDFQKRSSL 399 (423)
T ss_dssp CGGGGEEEEEE
T ss_pred CHHHeeeeeeE
Confidence 77888776554
No 54
>2fiu_A Conserved hypothetical protein; alpha-beta, dimeric alpha-beta barrels, structural genomics, protein structure initiative; 2.00A {Agrobacterium tumefaciens str} SCOP: d.58.4.16
Probab=78.49 E-value=4.5 Score=31.82 Aligned_cols=60 Identities=18% Similarity=0.360 Sum_probs=39.6
Q ss_pred CHHHHHHHHHHHHHHH-hCCCEEEeCCcccCCCCceeeceEEecCCCCccccccccccceEEEEEeCCHHHHHHHHHcCC
Q 011130 338 DSEQFEKILKYIRSGV-DGGAKLETGGERLGAKGYYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYKDLDEVIQRSNASQ 416 (493)
Q Consensus 338 ~~~~~~~~~~~i~~a~-~~ga~v~~gg~~~~~~g~~~~Ptvl~~~~~~~~i~~~E~fgPvl~v~~~~~~~eai~~~n~~~ 416 (493)
+.+.+++..+....++ +.|++++..|.. |.++.+.. .+-+.|+.|+|.+.+.++.|+-+
T Consensus 16 d~e~y~~Y~~~~~~~~~~~gGr~l~~g~~---------~~~~eG~~-----------~~~~viieFpS~~aa~~~~~s~~ 75 (99)
T 2fiu_A 16 DSERYKDYVSTAKPAFERFGANFLARGGS---------VTELEGTA-----------RARNVVIEFPSVQHAIDCYNSPE 75 (99)
T ss_dssp CHHHHHHHHHHHHHHHHHTTCEEEEESCC---------EEEEESCC-----------CSEEEEEEESSHHHHHHHHHSHH
T ss_pred CHHHHHHHHHHHHHHHHHcCcEEEEECCC---------ceEEecCC-----------cCeEEEEECCCHHHHHHHHcCHH
Confidence 4455555555555444 358888886653 55554421 23678999999999999998754
Q ss_pred C
Q 011130 417 Y 417 (493)
Q Consensus 417 ~ 417 (493)
|
T Consensus 76 Y 76 (99)
T 2fiu_A 76 Y 76 (99)
T ss_dssp H
T ss_pred H
Confidence 4
No 55
>3lo3_A Uncharacterized conserved protein; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; 2.38A {Colwellia psychrerythraea} SCOP: d.58.4.0
Probab=69.34 E-value=12 Score=29.04 Aligned_cols=61 Identities=15% Similarity=0.199 Sum_probs=40.6
Q ss_pred CCHHHHHHHHHHHHHHHh-CCCEEEeCCcccCCCCceeeceEEecCCCCccccccccccceEEEEEeCCHHHHHHHHHcC
Q 011130 337 IDSEQFEKILKYIRSGVD-GGAKLETGGERLGAKGYYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYKDLDEVIQRSNAS 415 (493)
Q Consensus 337 i~~~~~~~~~~~i~~a~~-~ga~v~~gg~~~~~~g~~~~Ptvl~~~~~~~~i~~~E~fgPvl~v~~~~~~~eai~~~n~~ 415 (493)
.+++.+++..+....+++ .|++++..| . +.++++.. -...+.|+.|+|.+.+.++.|+.
T Consensus 14 ~d~e~y~~Y~~~~~~~l~~~GG~~l~rg-~---------~~~lEG~~----------~~~~~viieFps~~aa~a~y~Sp 73 (94)
T 3lo3_A 14 KDAEKLQQYGARVASTLAKYSGEVLVKG-S---------VEQLHGKF----------EHKAQVILEFPSREDAYNWYHSE 73 (94)
T ss_dssp CCHHHHHHHHHHHHHHHHTTTCEEEEEE-E---------CEEEESCC----------CCSEEEEEEESSHHHHHHHHHSH
T ss_pred CCHHHHHHHHHHHHHHHHHcCCEEEEEc-c---------cccccCCC----------CCCeEEEEECCCHHHHHHHHCCH
Confidence 355556666665555554 488888766 3 44554421 12568999999999999999875
Q ss_pred CC
Q 011130 416 QY 417 (493)
Q Consensus 416 ~~ 417 (493)
.|
T Consensus 74 eY 75 (94)
T 3lo3_A 74 EY 75 (94)
T ss_dssp HH
T ss_pred HH
Confidence 54
No 56
>1kae_A HDH, histidinol dehydrogenase; L-histidinol dehydrogenase, homodimer, rossman fold, 4 domai L-histidine biosynthesis, NAD cofactor; HET: HSO NAD; 1.70A {Escherichia coli} SCOP: c.82.1.2 PDB: 1k75_A* 1kah_A* 1kar_A
Probab=65.94 E-value=2.9 Score=41.80 Aligned_cols=77 Identities=21% Similarity=0.266 Sum_probs=54.5
Q ss_pred EEEEeCCHHHHHHHHHcCCCCcEEEEecCCHHHHHHHHHhc-ceeEEEECCcCCC---------CCCCCccCCCCCCCCC
Q 011130 398 SILKYKDLDEVIQRSNASQYGLAAGVFTHNLDTANTLMRAL-RVGSVWINCFDVF---------DAAIPFGGYKQSGQGR 467 (493)
Q Consensus 398 ~v~~~~~~~eai~~~n~~~~gl~a~v~t~d~~~~~~~~~~l-~~g~V~VN~~~~~---------~~~~pfGG~~~SG~G~ 467 (493)
.|+.++|++|+++++|..-. -..-|.++|+. .+..++ .+|.|++..+... +.-+|- +|..|
T Consensus 306 ~ii~v~~l~ea~~~~N~~AP-EHLel~~~dp~---~~l~~I~nAGaIFlG~~tpe~~GDY~aG~NHvLPT-----~G~AR 376 (434)
T 1kae_A 306 RLIVTKDLAQCVEISNQYGP-EHLIIQTRNAR---ELVDSITSAGSVFLGDWSPESAGDYASGTNHVLPT-----YGYTA 376 (434)
T ss_dssp EEEECSSHHHHHHHHHHHCC-SEEEEESTTHH---HHGGGCCSCSEEEESTTCCHHHHHHTSSSCCCCCC-----TTGGG
T ss_pred eEEEECCHHHHHHHHHHhhh-HhhhhhhcCHH---HHHhhcCcccchhcCCCCchhhcccccCCCcccCC-----CCcee
Confidence 67789999999999998532 36688899875 566666 5999999986541 122444 45555
Q ss_pred cchHHHHHhhhhceEE
Q 011130 468 EKGSYSLSNYLQVKAV 483 (493)
Q Consensus 468 ~~g~~~l~~~~~~k~v 483 (493)
..|.-+.+.|++.-++
T Consensus 377 ~~sgLsV~~F~K~~s~ 392 (434)
T 1kae_A 377 TCSSLGLADFQKRMTV 392 (434)
T ss_dssp TCCCSCGGGGEEEEEE
T ss_pred ccCCCcHHhccceeeE
Confidence 6666677888776554
No 57
>3hhl_A RPA0582; alpha-beta-barrel, structural genomics, PSI-2, protein struc initiative, reductive methylation; HET: MLY MLZ PGE 2PE PE8 1PE PG4; 2.65A {Rhodopseudomonas palustris} PDB: 3hhl_B* 3hhl_C* 3dca_A
Probab=58.23 E-value=16 Score=30.82 Aligned_cols=66 Identities=14% Similarity=0.130 Sum_probs=44.3
Q ss_pred cCCCHHHHHHHHHHHHHHHh-CCCEEEeCCcccCCCCceeeceEEecCCCCccccccccccceEEEEEeCCHHHHHHHHH
Q 011130 335 PQIDSEQFEKILKYIRSGVD-GGAKLETGGERLGAKGYYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYKDLDEVIQRSN 413 (493)
Q Consensus 335 pli~~~~~~~~~~~i~~a~~-~ga~v~~gg~~~~~~g~~~~Ptvl~~~~~~~~i~~~E~fgPvl~v~~~~~~~eai~~~n 413 (493)
++.+.+.+++..+....+++ .|++++..|.. +.++.+... |. ...+.|+.|+|.+.++++.+
T Consensus 44 ~vtd~e~y~~Y~~~~~~~l~~~GG~~l~rG~~---------~~~lEG~~~-------e~-~~~~viieFPS~~aa~a~y~ 106 (143)
T 3hhl_A 44 ETTGAEAYAAYGRDSGPVSERLGGXVVWQGQF---------ELMLIGPQD-------EH-WDHVFIAEYPSVAAFVEMIR 106 (143)
T ss_dssp CCBHHHHHHHHHHHHHHHHHHTTCEEEEEEEE---------EEEEESCTT-------CC-CSEEEEEEESCHHHHHHHHH
T ss_pred CcCCHHHHHHHHHHHHHHHHHcCCEEEeecCC---------ceeEECCCC-------CC-CCeEEEEECCCHHHHHHHHc
Confidence 35566777777776665554 58898887653 444544221 11 14679999999999999988
Q ss_pred cCCC
Q 011130 414 ASQY 417 (493)
Q Consensus 414 ~~~~ 417 (493)
+-.|
T Consensus 107 SpeY 110 (143)
T 3hhl_A 107 DPVY 110 (143)
T ss_dssp CHHH
T ss_pred CHHH
Confidence 7543
No 58
>3fxd_A Protein ICMQ; helix bundle, helix-turn-helix, unknown function; 2.10A {Legionella pneumophila} PDB: 3fxe_A
Probab=53.35 E-value=32 Score=23.72 Aligned_cols=47 Identities=19% Similarity=0.283 Sum_probs=37.0
Q ss_pred CCHHHHHHHHHHHHHHccCCCCCCCCHHHHHHHHHHHHHHHHHhHHHHHHHHH
Q 011130 100 GEAEDVNRAVSAARKAFDEGPWPRMTAYERSKIILRFADLLERHNDEIAALET 152 (493)
Q Consensus 100 ~~~~~v~~av~~A~~A~~~~~w~~~~~~~R~~iL~~la~~l~~~~~ela~~~~ 152 (493)
.+.++.++.+++.-+|-..|+|.+ ..+|+-+.+-|.+-++.++.-+.
T Consensus 5 lt~eq~~aILkaLdeaIe~GPWe~------SNFLRvIGKnL~eIRd~F~~~i~ 51 (57)
T 3fxd_A 5 LSDEQKETILKALNDAIEKGPWDK------SNFLRVIGKKLIAIRDRFLKRIG 51 (57)
T ss_dssp CCHHHHHHHHHHHHHHHHHSCTTS------CHHHHHHHHHHHHHHHHHHHHHH
T ss_pred hhHHHHHHHHHHHHHHHHcCCchH------HHHHHHHHHhHHHHHHHHHHHhc
Confidence 467777888888888888889986 46788888889888888887653
No 59
>1s7i_A Hypothetical protein PA1349; structural genomics, protein structure initiative, pseudomon aeruginosa, MCSG, PSI; 1.80A {Pseudomonas aeruginosa} SCOP: d.58.4.9
Probab=50.83 E-value=45 Score=27.12 Aligned_cols=73 Identities=12% Similarity=0.147 Sum_probs=40.1
Q ss_pred HHHHHHHHHHHHHHhCCCEEEeCCcc-cCCCCceee-----ceEEecCCCCccccccccccceEEEEEeCCHHHHHHHHH
Q 011130 340 EQFEKILKYIRSGVDGGAKLETGGER-LGAKGYYIK-----PTVFTGVKDDMLIAKDEIFGPVQSILKYKDLDEVIQRSN 413 (493)
Q Consensus 340 ~~~~~~~~~i~~a~~~ga~v~~gg~~-~~~~g~~~~-----Ptvl~~~~~~~~i~~~E~fgPvl~v~~~~~~~eai~~~n 413 (493)
..++...+++++..+.|. ++.|+.. +...+..+. |+|..+.-.+ .+|..|- +.|+.++|+|||++++.
T Consensus 30 ~~~~~~~~~~~~l~~~G~-lv~g~~L~~~~~a~~Vr~~~g~~~VtdGPfaE----tkE~lgG-~~iie~~s~deA~e~A~ 103 (124)
T 1s7i_A 30 AIVDECMTYSDQLGKAGH-YIASHALQSVQTATTLRHQGGRLAMTDGPFAE----TKEQLGG-FYLIEARDLNQALQIAA 103 (124)
T ss_dssp HHHHHHHHHHHHHHHHTC-EEEEEECCCGGGCEEEEECSSCEEEEESCSSC----CSSEEEE-EEEEEESSHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHHCCE-EEecCcCCCCcceEEEEecCCceeEecCCCcC----Cccccee-EEEEEeCCHHHHHHHHH
Confidence 344555666666666664 3333221 111222222 3444332222 4466665 45678999999999999
Q ss_pred cCCCC
Q 011130 414 ASQYG 418 (493)
Q Consensus 414 ~~~~g 418 (493)
..++.
T Consensus 104 ~~P~~ 108 (124)
T 1s7i_A 104 KIPPG 108 (124)
T ss_dssp TCGGG
T ss_pred hCCcc
Confidence 87653
No 60
>2l82_A Designed protein OR32; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative, de novo protein; NMR {Artificial gene}
Probab=26.88 E-value=2.3e+02 Score=22.23 Aligned_cols=140 Identities=18% Similarity=0.182 Sum_probs=88.6
Q ss_pred EEEEecCcHHHHHHHHHHhhcCCCceeEecCCCCceEEccCCCHHHHHHHHHHHHHhhcCCcccCCCeeEecchhHHHHH
Q 011130 232 KLAFTGSTTTGKIVLQLAAKSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFV 311 (493)
Q Consensus 232 ~v~fTGs~~~g~~v~~~a~~~~~~pv~lelgG~~p~iV~~daDl~~aa~~i~~~~~~~~GQ~C~a~~~v~V~~~i~d~f~ 311 (493)
.++|...++.-+.|...... . |...+++..|.|-..--+.+ .-|..+|-. .--| ++ .++|.
T Consensus 5 fvvfssdpeilkeivreikr-q---------gvrvvllysdqdekrrrerl--eefekqgvd-----vrtv-ed-kedfr 65 (162)
T 2l82_A 5 FVVFSSDPEILKEIVREIKR-Q---------GVRVVLLYSDQDEKRRRERL--EEFEKQGVD-----VRTV-ED-KEDFR 65 (162)
T ss_dssp EEEEESCHHHHHHHHHHHHH-T---------TCEEEEEECCSCHHHHHHHH--HHHHTTTCE-----EEEC-CS-HHHHH
T ss_pred EEEecCCHHHHHHHHHHHHh-C---------CeEEEEEecCchHHHHHHHH--HHHHHcCCc-----eeee-cc-HHHHH
Confidence 46788888888887776655 2 33345566777766544443 346667722 2222 22 47788
Q ss_pred HHHHHHHhhcccCCCCCCCCccccCCCHHHHHHHHHHHHHHHhCCCEEEeCCcccCCCCceeeceEEecCCCCc--cccc
Q 011130 312 EKANALAMKRVVGDPFKGGIQQGPQIDSEQFEKILKYIRSGVDGGAKLETGGERLGAKGYYIKPTVFTGVKDDM--LIAK 389 (493)
Q Consensus 312 ~~l~~~~~~~~vg~p~~~~~~~gpli~~~~~~~~~~~i~~a~~~ga~v~~gg~~~~~~g~~~~Ptvl~~~~~~~--~i~~ 389 (493)
+.+.+....++ ..++--+++.+..+.++++|++|.+.|..+..- .+..++. .-.+
T Consensus 66 enireiweryp-------qldvvvivttddkewikdfieeakergvevfvv----------------ynnkdddrrkeaq 122 (162)
T 2l82_A 66 ENIREIWERYP-------QLDVVVIVTTDDKEWIKDFIEEAKERGVEVFVV----------------YNNKDDDRRKEAQ 122 (162)
T ss_dssp HHHHHHHHHCT-------TCCEEEEEECCCHHHHHHHHHHHHHTTCEEEEE----------------EECSCHHHHHHHH
T ss_pred HHHHHHHHhCC-------CCcEEEEEecCcHHHHHHHHHHHHhcCcEEEEE----------------ecCCCchhHHHHH
Confidence 88888776642 233444566677799999999999999876532 1222221 2245
Q ss_pred cccccceEEEEEeCCHHHHHHHHH
Q 011130 390 DEIFGPVQSILKYKDLDEVIQRSN 413 (493)
Q Consensus 390 ~E~fgPvl~v~~~~~~~eai~~~n 413 (493)
+|.-.-=+-+..+.+-+|.|+...
T Consensus 123 qefrsdgvdvrtvsdkeelieqvr 146 (162)
T 2l82_A 123 QEFRSDGVDVRTVSDKEELIEQVR 146 (162)
T ss_dssp HHHCCSSCEEEEESSHHHHHHHHH
T ss_pred HHhhhcCceeeecCCHHHHHHHHH
Confidence 666666677888888888887654
No 61
>2ioj_A Hypothetical protein AF_1212; NYSGXRC, PFAM:DRTGG, structural genomics, PSI-2, protein structure initiative; HET: MSE; 2.15A {Archaeoglobus fulgidus} SCOP: c.98.2.2
Probab=25.07 E-value=45 Score=27.42 Aligned_cols=44 Identities=18% Similarity=0.123 Sum_probs=25.3
Q ss_pred eEEEeeeCCccchhhhhhccccccEEEEecCcHHHHHHHHHHhh
Q 011130 208 GVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLAAK 251 (493)
Q Consensus 208 gvv~vv~~~~~~~~~~L~~~~~v~~v~fTGs~~~g~~v~~~a~~ 251 (493)
|.+.+++|...+.-..+...+++..|.+||+......+.+.+.+
T Consensus 53 ~~l~I~~G~r~~~~l~a~~~~~~~~iIlt~g~~~~~~i~~~A~~ 96 (139)
T 2ioj_A 53 NAALVTGGDRSDLLLTALEMPNVRCLILTGNLEPVQLVLTKAEE 96 (139)
T ss_dssp SEEEEEETTCHHHHHHHTTCTTEEEEEEETTCCCCHHHHHHHHH
T ss_pred CEEEEEcCCHHHHHHHHHhCCCCcEEEEcCCCCCCHHHHHHHHH
Confidence 34666666544433222222467777788777666666666554
No 62
>4g6u_B EC869 CDII; beta-augmentation, DNAse, toxin, immunity; 2.35A {Escherichia coli O157}
Probab=23.86 E-value=99 Score=26.82 Aligned_cols=82 Identities=12% Similarity=0.093 Sum_probs=57.2
Q ss_pred cceeCCEee--eCCCCCeeeeecCCCCCeEEEEecCCHHHHHHHHHHHHHHccCCCCCCCC-HHHHHHHHHHHHHHHHHh
Q 011130 67 QLLINGQFV--DSASGKTFPTLDPRTGDVITHVAEGEAEDVNRAVSAARKAFDEGPWPRMT-AYERSKIILRFADLLERH 143 (493)
Q Consensus 67 ~~~I~G~~~--~~~~~~~~~v~~P~tg~~i~~v~~~~~~~v~~av~~A~~A~~~~~w~~~~-~~~R~~iL~~la~~l~~~ 143 (493)
..+.|+++. .+.++..+...|| .+.+..--+..+..++-.++..|-...+ .++ ++++.+++.. +.+++.
T Consensus 12 ~~~~n~~f~~I~T~sg~~l~~~Dp-~~~~~~L~~dvdd~~LG~~i~~AL~~SR-----~i~~~ee~~~~f~~--~~~~~~ 83 (177)
T 4g6u_B 12 NIFVTPDFLSVETYSGLGMTGRDP-LFSPRLLQPDVDDKSLGEEILQALSDSR-----TLDVLEERVAFFDL--EKSKEQ 83 (177)
T ss_dssp EEEECSSCEEEEEEEESSSEEECT-TSCCEEECTTCCHHHHHHHHHHHHHTCC-----BCCSHHHHHHHHCT--TTTHHH
T ss_pred EEEecCCEEEEEEEecCceEecCC-CCCCeeCCCCCCHHHHHHHHHHHHHhCC-----ccCCHHHHHHHhcc--hhhhHH
Confidence 457788874 3445666778899 5677777788999999999888876544 667 8888888764 344555
Q ss_pred HHHHHHHHHHHcC
Q 011130 144 NDEIAALETWDNG 156 (493)
Q Consensus 144 ~~ela~~~~~e~G 156 (493)
-.++.+.++...|
T Consensus 84 yk~w~~~lm~~yG 96 (177)
T 4g6u_B 84 YAAWIATLMEKYG 96 (177)
T ss_dssp HHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHhC
Confidence 5555555665555
No 63
>1use_A VAsp, vasodilator-stimulated phosphoprotein; signaling protein, null; 1.3A {Homo sapiens} SCOP: h.1.29.1 PDB: 1usd_A
Probab=20.86 E-value=1.5e+02 Score=19.39 Aligned_cols=27 Identities=11% Similarity=0.121 Sum_probs=22.4
Q ss_pred HHHHHHHHHHHHHhHHHHHHHHHHHcC
Q 011130 130 SKIILRFADLLERHNDEIAALETWDNG 156 (493)
Q Consensus 130 ~~iL~~la~~l~~~~~ela~~~~~e~G 156 (493)
.++|..+...|++..++|.+++..|..
T Consensus 14 qEIL~E~RkElqK~K~EIIeAi~~El~ 40 (45)
T 1use_A 14 QELLEEVKKELQKVKEEIIEAFVQELR 40 (45)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 578889999999999999998876643
Done!