BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 011137
(493 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q9S7R4|PP125_ARATH Pentatricopeptide repeat-containing protein At1g74900,
mitochondrial OS=Arabidopsis thaliana GN=OTP43 PE=2 SV=1
Length = 482
Score = 672 bits (1735), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 323/474 (68%), Positives = 384/474 (81%), Gaps = 8/474 (1%)
Query: 26 TTTSPAPLPPAAADPAALASLILTSTDPRTLTQT----LHCPSLHWTPQLVDQIIKRLWN 81
T+ + A L P AD AA+A LIL+S P T Q L + WTP LV+ ++KRLWN
Sbjct: 11 TSAAGANLKPPPADSAAIAKLILSS--PNTTHQDDQFLLSTKTTPWTPNLVNSVLKRLWN 68
Query: 82 HALKALHFFNIL-SYHPTYAHSPSSFDHAIDLAARLRDYRTVWTLVHRMKSLSLGPTQKT 140
H KAL FF+ L ++H Y H SSFD AID+AARL + TVW+L+HRM+SL +GP+ KT
Sbjct: 69 HGPKALQFFHFLDNHHREYVHDASSFDLAIDIAARLHLHPTVWSLIHRMRSLRIGPSPKT 128
Query: 141 FAIIAERYVSAGKADRAVKIFLSMHEHGCRQSLNSFNTILDLLCKEKKVEKAYNLFKVFR 200
FAI+AERY SAGK D+AVK+FL+MHEHGC Q L SFNTILD+LCK K+VEKAY LF+ R
Sbjct: 129 FAIVAERYASAGKPDKAVKLFLNMHEHGCFQDLASFNTILDVLCKSKRVEKAYELFRALR 188
Query: 201 GKFKADVISYNVIANGWCLVKRTNKALEVLKEMVDRGLNPNLTTYNIVLKGYFRAGQIEE 260
G+F D ++YNVI NGWCL+KRT KALEVLKEMV+RG+NPNLTTYN +LKG+FRAGQI
Sbjct: 189 GRFSVDTVTYNVILNGWCLIKRTPKALEVLKEMVERGINPNLTTYNTMLKGFFRAGQIRH 248
Query: 261 AWRFFLEMKKRKCEIDVVTYTTIVHGFGVVGEIKRARNVFDGMVNGGVLPSVATYNAMIQ 320
AW FFLEMKKR CEIDVVTYTT+VHGFGV GEIKRARNVFD M+ GVLPSVATYNAMIQ
Sbjct: 249 AWEFFLEMKKRDCEIDVVTYTTVVHGFGVAGEIKRARNVFDEMIREGVLPSVATYNAMIQ 308
Query: 321 VLCKKDSVENAILVFEEMVGKGYMPNSTTYNVVIRGLCHTGEMERALEFVGRMKDDECEP 380
VLCKKD+VENA+++FEEMV +GY PN TTYNV+IRGL H GE R E + RM+++ CEP
Sbjct: 309 VLCKKDNVENAVVMFEEMVRRGYEPNVTTYNVLIRGLFHAGEFSRGEELMQRMENEGCEP 368
Query: 381 NVQTYNILIRYFCDAGEIERGLELFEKMGSGVCLPNLDTYNILISSMFVRKKSDDLLVAG 440
N QTYN++IRY+ + E+E+ L LFEKMGSG CLPNLDTYNILIS MFVRK+S+D++VAG
Sbjct: 369 NFQTYNMMIRYYSECSEVEKALGLFEKMGSGDCLPNLDTYNILISGMFVRKRSEDMVVAG 428
Query: 441 KLLIEMVDRGFMPRKFTFNRVLNGLLLIGNQGLAKEILRLQSRCG-RLPRQFKL 493
KLL+EMV+RGF+PRKFTFNRVLNGLLL GNQ AKEILRLQS+ G RL R+F+L
Sbjct: 429 KLLLEMVERGFIPRKFTFNRVLNGLLLTGNQAFAKEILRLQSKSGSRLLRKFRL 482
>sp|Q9FVX2|PP129_ARATH Pentatricopeptide repeat-containing protein At1g77360,
mitochondrial OS=Arabidopsis thaliana GN=At1g77360 PE=2
SV=2
Length = 517
Score = 226 bits (575), Expect = 4e-58, Method: Compositional matrix adjust.
Identities = 133/456 (29%), Positives = 227/456 (49%), Gaps = 6/456 (1%)
Query: 11 NHLHFFCIYRGLSPLTTTSPAPLPPAAADPAALASLILTSTDPRTLTQTLHCPSLHWTPQ 70
N FC LS +S + A D A S +L S+ L L L + +
Sbjct: 43 NRQSRFCCKSFLSARLYSSSEQVRDVA-DVAKNISKVLMSSPQLVLDSALDQSGLRVSQE 101
Query: 71 LVDQIIKRLWNHALKALHFFNILSYHPTYAHSPSSFDHAIDLAARLRDYRTVWTLVHRMK 130
+V+ ++ R N L FF Y HS ++ I+ A++R Y+ +W L++ M+
Sbjct: 102 VVEDVLNRFRNAGLLTYRFFQWSEKQRHYEHSVRAYHMMIESTAKIRQYKLMWDLINAMR 161
Query: 131 SLSLGPTQKTFAIIAERYVSAGKADRAVKIFLSMHEHGCRQSLNSFNTILDLLCKEKKVE 190
+ + TF I+ +Y A K D A+ F M ++ +L +FN +L LCK K V
Sbjct: 162 KKKMLNVE-TFCIVMRKYARAQKVDEAIYAFNVMEKYDLPPNLVAFNGLLSALCKSKNVR 220
Query: 191 KAYNLFKVFRGKFKADVISYNVIANGWCLVKRTNKALEVLKEMVDRGLNPNLTTYNIVLK 250
KA +F+ R +F D +Y+++ GW KA EV +EM+D G +P++ TY+I++
Sbjct: 221 KAQEVFENMRDRFTPDSKTYSILLEGWGKEPNLPKAREVFREMIDAGCHPDIVTYSIMVD 280
Query: 251 GYFRAGQIEEAWRFFLEMKKRKCEIDVVTYTTIVHGFGVVGEIKRARNVFDGMVNGGVLP 310
+AG+++EA M C+ Y+ +VH +G ++ A + F M G+
Sbjct: 281 ILCKAGRVDEALGIVRSMDPSICKPTTFIYSVLVHTYGTENRLEEAVDTFLEMERSGMKA 340
Query: 311 SVATYNAMIQVLCKKDSVENAILVFEEMVGKGYMPNSTTYNVVIRGLCHTGEMERALEFV 370
VA +N++I CK + ++N V +EM KG PNS + N+++R L GE + A +
Sbjct: 341 DVAVFNSLIGAFCKANRMKNVYRVLKEMKSKGVTPNSKSCNIILRHLIERGEKDEAFDVF 400
Query: 371 GRMKDDECEPNVQTYNILIRYFCDAGEIERGLELFEKMGSGVCLPNLDTYNILISSMFVR 430
+M CEP+ TY ++I+ FC+ E+E ++++ M P++ T+++LI+ +
Sbjct: 401 RKMI-KVCEPDADTYTMVIKMFCEKKEMETADKVWKYMRKKGVFPSMHTFSVLINGLCEE 459
Query: 431 KKSDDLLVAGKLLIEMVDRGFMPRKFTFNRVLNGLL 466
+ + V LL EM++ G P TF R+ L+
Sbjct: 460 RTTQKACV---LLEEMIEMGIRPSGVTFGRLRQLLI 492
Score = 72.8 bits (177), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 54/248 (21%), Positives = 107/248 (43%), Gaps = 38/248 (15%)
Query: 125 LVHRMKSLSLGPTQKTFAIIAERYVSAGKADRAVKIFLSMHEHGCRQSLNSFNTILDLLC 184
+V M PT ++++ Y + + + AV FL M G + + FN+++ C
Sbjct: 294 IVRSMDPSICKPTTFIYSVLVHTYGTENRLEEAVDTFLEMERSGMKADVAVFNSLIGAFC 353
Query: 185 KEKKVEKAYNLFKVFRGK-FKADVISYNVIANGWCLVKRTNKALEVLKEMVDRGLNPNLT 243
K +++ Y + K + K + S N+I ++A +V ++M+ + P+
Sbjct: 354 KANRMKNVYRVLKEMKSKGVTPNSKSCNIILRHLIERGEKDEAFDVFRKMI-KVCEPDAD 412
Query: 244 TYNIVLKGYFRAGQIEEAWRFFLEMKKRKCEIDVVTYTTIVHGFGVVGEIKRARNVFDGM 303
TY +V+K + ++E A + + M+K+
Sbjct: 413 TYTMVIKMFCEKKEMETADKVWKYMRKK-------------------------------- 440
Query: 304 VNGGVLPSVATYNAMIQVLCKKDSVENAILVFEEMVGKGYMPNSTTYNVVIRGLCHTGEM 363
GV PS+ T++ +I LC++ + + A ++ EEM+ G P+ T+ +R L E
Sbjct: 441 ---GVFPSMHTFSVLINGLCEERTTQKACVLLEEMIEMGIRPSGVTFG-RLRQLLIKEER 496
Query: 364 ERALEFVG 371
E L+F+
Sbjct: 497 EDVLKFLN 504
Score = 47.4 bits (111), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 43/171 (25%), Positives = 79/171 (46%), Gaps = 9/171 (5%)
Query: 311 SVATYNAMIQVLCKKDSVENAILVFE--EMVGKGYMPNSTTYNVVIRGLCHTGEMERALE 368
SV Y+ MI+ K + L+++ + K M N T+ +V+R +++ A+
Sbjct: 133 SVRAYHMMIESTAK---IRQYKLMWDLINAMRKKKMLNVETFCIVMRKYARAQKVDEAIY 189
Query: 369 FVGRMKDDECEPNVQTYNILIRYFCDAGEIERGLELFEKMGSGVCLPNLDTYNILISSMF 428
M+ + PN+ +N L+ C + + + E+FE M P+ TY+IL+
Sbjct: 190 AFNVMEKYDLPPNLVAFNGLLSALCKSKNVRKAQEVFENMRDRFT-PDSKTYSILLEGW- 247
Query: 429 VRKKSDDLLVAGKLLIEMVDRGFMPRKFTFNRVLNGLLLIGNQGLAKEILR 479
K +L A ++ EM+D G P T++ +++ L G A I+R
Sbjct: 248 --GKEPNLPKAREVFREMIDAGCHPDIVTYSIMVDILCKAGRVDEALGIVR 296
>sp|Q9C9A2|PP112_ARATH Pentatricopeptide repeat-containing protein At1g71060,
mitochondrial OS=Arabidopsis thaliana GN=At1g71060 PE=2
SV=1
Length = 510
Score = 220 bits (560), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 130/475 (27%), Positives = 240/475 (50%), Gaps = 12/475 (2%)
Query: 16 FCIYRGLSPLTTTSPAPLPPAAADPAALASLILTSTDPRTLTQTLHCPSLHWTPQLVDQI 75
F +Y + + A+ D + ++ TD + T L+ S+ +P L++++
Sbjct: 42 FTLYGSFHASSVETQVSANDASQDAERICKILTKFTDSKVET-LLNEASVKLSPALIEEV 100
Query: 76 IKRLWNHALKALHFFNILSYHPTYAHSPSSFDHAIDLAARLRDYRTVWTLVHRMKSLSLG 135
+K+L N + AL F + H+ S+++ I+ +++ ++ +W+LV MK+ L
Sbjct: 101 LKKLSNAGVLALSVFKWAENQKGFKHTTSNYNALIESLGKIKQFKLIWSLVDDMKAKKL- 159
Query: 136 PTQKTFAIIAERYVSAGKADRAVKIFLSMHEHGCRQSLNSFNTILDLLCKEKKVEKAYNL 195
+++TFA+I+ RY A K A+ F M E G + + FN +LD L K + V A +
Sbjct: 160 LSKETFALISRRYARARKVKEAIGAFHKMEEFGFKMESSDFNRMLDTLSKSRNVGDAQKV 219
Query: 196 F-KVFRGKFKADVISYNVIANGWCLVKRTNKALEVLKEMVDRGLNPNLTTYNIVLKGYFR 254
F K+ + +F+ D+ SY ++ GW + EV +EM D G P++ Y I++ + +
Sbjct: 220 FDKMKKKRFEPDIKSYTILLEGWGQELNLLRVDEVNREMKDEGFEPDVVAYGIIINAHCK 279
Query: 255 AGQIEEAWRFFLEMKKRKCEIDVVTYTTIVHGFGVVGEIKRARNVFDGMVNGGVLPSVAT 314
A + EEA RFF EM++R C+ + ++++G G ++ A F+ + G T
Sbjct: 280 AKKYEEAIRFFNEMEQRNCKPSPHIFCSLINGLGSEKKLNDALEFFERSKSSGFPLEAPT 339
Query: 315 YNAMIQVLCKKDSVENAILVFEEMVGKGYMPNSTTYNVVIRGLCHTGEMERALEFVGRMK 374
YNA++ C +E+A +EM KG PN+ TY++++ L + A E M
Sbjct: 340 YNALVGAYCWSQRMEDAYKTVDEMRLKGVGPNARTYDIILHHLIRMQRSKEAYEVYQTM- 398
Query: 375 DDECEPNVQTYNILIRYFCDAGEIERGLELFEKMGSGVCLPNLDTYNILISSMFVRKKSD 434
CEP V TY I++R FC+ ++ ++++++M LP + ++ LI+++ K D
Sbjct: 399 --SCEPTVSTYEIMVRMFCNKERLDMAIKIWDEMKGKGVLPGMHMFSSLITALCHENKLD 456
Query: 435 DLLVAGKLLIEMVDRGFMPRKFTFNRVLNGLLLIGNQGLAKEILRLQSRCGRLPR 489
+ A + EM+D G P F+R+ LL ++G ++ L + RL +
Sbjct: 457 E---ACEYFNEMLDVGIRPPGHMFSRLKQTLL---DEGRKDKVTDLVVKMDRLRK 505
Score = 101 bits (252), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 96/422 (22%), Positives = 181/422 (42%), Gaps = 43/422 (10%)
Query: 80 WNHALKALHFFNILSYHPTYAHSPSSFDHAIDLAARLRDYRTVWTLVHRMKSLSLGPTQK 139
W H KA +F S+H + + S + A A R+ T +T L+ +
Sbjct: 35 WIH--KASNFTLYGSFHASSVETQVSANDASQDAERICKILTKFTDSKVETLLNEASVKL 92
Query: 140 TFAIIAE---RYVSAGKADRAVKIF-LSMHEHGCRQSLNSFNTILDLLCKEKKVEKAYNL 195
+ A+I E + +AG A+ +F + ++ G + + +++N +++ L K K+ + ++L
Sbjct: 93 SPALIEEVLKKLSNAGVL--ALSVFKWAENQKGFKHTTSNYNALIESLGKIKQFKLIWSL 150
Query: 196 FKVFRGKFKADVISYNVIANGWCLVKRTNKALEVLKEMVDRGLNPNLTTYNIVLKGYFRA 255
+ K ++ +I+ + ++ +A+ +M + G + +N +L ++
Sbjct: 151 VDDMKAKKLLSKETFALISRRYARARKVKEAIGAFHKMEEFGFKMESSDFNRMLDTLSKS 210
Query: 256 GQIEEAWRFFLEMKKRKCEIDVVTYTTIVHGFGVVGEIKRARNVFDGMVNGGVLPSVATY 315
+ +A + F +MKK++ E D+ +YT ++ G+G + R V M + G P V Y
Sbjct: 211 RNVGDAQKVFDKMKKKRFEPDIKSYTILLEGWGQELNLLRVDEVNREMKDEGFEPDVVAY 270
Query: 316 NAMIQVLCKKDSVENAILVFEEMVGKGYMPNSTTYNVVIRGLCHTGEMERALEFVGRMKD 375
+I CK E AI F EM + P+ + +I GL ++ ALEF R K
Sbjct: 271 GIIINAHCKAKKYEEAIRFFNEMEQRNCKPSPHIFCSLINGLGSEKKLNDALEFFERSKS 330
Query: 376 DECEPNVQTYNILIRYFCDAGEIE--------------------------------RGLE 403
TYN L+ +C + +E R E
Sbjct: 331 SGFPLEAPTYNALVGAYCWSQRMEDAYKTVDEMRLKGVGPNARTYDIILHHLIRMQRSKE 390
Query: 404 LFEKMGSGVCLPNLDTYNILISSMFVRKKSDDLLVAGKLLIEMVDRGFMPRKFTFNRVLN 463
+E + C P + TY I++ MF K+ D+ + K+ EM +G +P F+ ++
Sbjct: 391 AYEVYQTMSCEPTVSTYEIMV-RMFCNKERLDMAI--KIWDEMKGKGVLPGMHMFSSLIT 447
Query: 464 GL 465
L
Sbjct: 448 AL 449
>sp|Q0WP85|PP150_ARATH Pentatricopeptide repeat-containing protein At2g13420,
mitochondrial OS=Arabidopsis thaliana GN=At2g13420 PE=2
SV=1
Length = 509
Score = 211 bits (537), Expect = 1e-53, Method: Compositional matrix adjust.
Identities = 137/485 (28%), Positives = 247/485 (50%), Gaps = 31/485 (6%)
Query: 1 MFALLRKPPKNHLHFFCIYRGLSPLTT---TSPAPLPPAAADPAALASLILTSTDP-RTL 56
M L + P HLH + R +S + + T P ++D ++ +++T+ +P +
Sbjct: 1 MLLLKQISPPFHLH--QLRRRISTIISAGFTLNLPKLEPSSDAELISQMLITNHNPFHFM 58
Query: 57 TQTLHCPSLHWTPQLVDQIIKRLWNHALKALHFFNILSYHPTYAHSPSSFDHAIDLAARL 116
+L + TP L+ Q + RL +++ AL FF L P+ + +P+SF+ ID+ R+
Sbjct: 59 ESSLQLNGISLTPNLIHQTLLRLRHNSKIALSFFQYLRSLPSPSTTPTSFNLIIDILGRV 118
Query: 117 RDYRTVWTLVHRMKSLSLGPTQKTFAIIAERYVSAGKADRAVKIFLSMHEHGC-----RQ 171
R + V L+ M S +TF I+ +R ++AG +AV+ F + C R
Sbjct: 119 RQFDVVRQLIVEMDQTS----PETFLILVKRLIAAGLTRQAVRAF---DDAPCFLENRRF 171
Query: 172 SLNSFNTILDLLCKEKKVEKAYNLFKVFRGKFKADVISYNVIANGWCLVKRTNKALEVLK 231
L F +LD LCK + A +F + +F +D Y ++ GWC ++R + A + L
Sbjct: 172 RLVEFGFLLDTLCKYGYTKMAVGVFNERKEEFGSDEKVYTILIAGWCKLRRIDMAEKFLV 231
Query: 232 EMVDRGLNPNLTTYNIVLKGYFRAGQIEEAWRF----------FLEMKKRKCEIDVVTYT 281
EM++ G+ PN+ TYN++L G R + RF F EM++R E DV +++
Sbjct: 232 EMIESGIEPNVVTYNVLLNGICRTASLHPEERFERNVRNAEKVFDEMRQRGIEPDVTSFS 291
Query: 282 TIVHGFGVVGEIKRARNVFDGMVNGGVLPSVATYNAMIQVLCKKDSVENAILVFEEMVGK 341
++H + + + + M G+ P++ TY ++++ LC +E A + E MV
Sbjct: 292 IVLHMYSRAHKAELTLDKMKLMKAKGISPTIETYTSVVKCLCSCGRLEEAEELLETMVES 351
Query: 342 GYMPNSTTYNVVIRGLCHTGEMERALEFVGRMKDDECEPNVQTYNILIRYFCDAGEIERG 401
G P+S TYN + + A+ +MK+ C+P+ QTYN+L+ F + G++E
Sbjct: 352 GISPSSATYNCFFKEYKGRKDANGAMNLYRKMKNGLCKPSTQTYNVLLGTFINLGKMETV 411
Query: 402 LELFEKMGSGVCLPNLDTYNILISSMFVRKKSDDLLVAGKLLIEMVDRGFMPRKFTFNRV 461
E+++ + + P+LD+Y L+ + ++K + A +EM++RGF+P+K TF +
Sbjct: 412 KEIWDDLKASETGPDLDSYTSLVHGLCSKEKWKE---ACGYFVEMIERGFLPQKLTFETL 468
Query: 462 LNGLL 466
GL+
Sbjct: 469 YKGLI 473
Score = 90.1 bits (222), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 52/208 (25%), Positives = 101/208 (48%), Gaps = 1/208 (0%)
Query: 157 AVKIFLSMHEHGCRQSLNSFNTILDLLCKEKKVEKAYNLFKVFRGKFKADVI-SYNVIAN 215
A K+F M + G + SF+ +L + + K E + K+ + K + I +Y +
Sbjct: 271 AEKVFDEMRQRGIEPDVTSFSIVLHMYSRAHKAELTLDKMKLMKAKGISPTIETYTSVVK 330
Query: 216 GWCLVKRTNKALEVLKEMVDRGLNPNLTTYNIVLKGYFRAGQIEEAWRFFLEMKKRKCEI 275
C R +A E+L+ MV+ G++P+ TYN K Y A + +MK C+
Sbjct: 331 CLCSCGRLEEAEELLETMVESGISPSSATYNCFFKEYKGRKDANGAMNLYRKMKNGLCKP 390
Query: 276 DVVTYTTIVHGFGVVGEIKRARNVFDGMVNGGVLPSVATYNAMIQVLCKKDSVENAILVF 335
TY ++ F +G+++ + ++D + P + +Y +++ LC K+ + A F
Sbjct: 391 STQTYNVLLGTFINLGKMETVKEIWDDLKASETGPDLDSYTSLVHGLCSKEKWKEACGYF 450
Query: 336 EEMVGKGYMPNSTTYNVVIRGLCHTGEM 363
EM+ +G++P T+ + +GL + +M
Sbjct: 451 VEMIERGFLPQKLTFETLYKGLIQSNKM 478
>sp|Q9LFF1|PP281_ARATH Pentatricopeptide repeat-containing protein At3g53700,
chloroplastic OS=Arabidopsis thaliana GN=MEE40 PE=2 SV=1
Length = 754
Score = 207 bits (526), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 121/387 (31%), Positives = 197/387 (50%), Gaps = 5/387 (1%)
Query: 104 SSFDHAIDLAARLRDYRTVWTLVHRMKSLSLGPTQKTFAIIAERYVSAGKADRAVKIFLS 163
S+F+ I R R ++ M S L P +KTF + + Y+ G D A++I
Sbjct: 190 STFNVLIKALCRAHQLRPAILMLEDMPSYGLVPDEKTFTTVMQGYIEEGDLDGALRIREQ 249
Query: 164 MHEHGCRQSLNSFNTILDLLCKEKKVEKAYNLFKVFRGK--FKADVISYNVIANGWCLVK 221
M E GC S S N I+ CKE +VE A N + + F D ++N + NG C
Sbjct: 250 MVEFGCSWSNVSVNVIVHGFCKEGRVEDALNFIQEMSNQDGFFPDQYTFNTLVNGLCKAG 309
Query: 222 RTNKALEVLKEMVDRGLNPNLTTYNIVLKGYFRAGQIEEAWRFFLEMKKRKCEIDVVTYT 281
A+E++ M+ G +P++ TYN V+ G + G+++EA +M R C + VTY
Sbjct: 310 HVKHAIEIMDVMLQEGYDPDVYTYNSVISGLCKLGEVKEAVEVLDQMITRDCSPNTVTYN 369
Query: 282 TIVHGFGVVGEIKRARNVFDGMVNGGVLPSVATYNAMIQVLCKKDSVENAILVFEEMVGK 341
T++ +++ A + + + G+LP V T+N++IQ LC + A+ +FEEM K
Sbjct: 370 TLISTLCKENQVEEATELARVLTSKGILPDVCTFNSLIQGLCLTRNHRVAMELFEEMRSK 429
Query: 342 GYMPNSTTYNVVIRGLCHTGEMERALEFVGRMKDDECEPNVQTYNILIRYFCDAGEIERG 401
G P+ TYN++I LC G+++ AL + +M+ C +V TYN LI FC A +
Sbjct: 430 GCEPDEFTYNMLIDSLCSKGKLDEALNMLKQMELSGCARSVITYNTLIDGFCKANKTREA 489
Query: 402 LELFEKMGSGVCLPNLDTYNILISSMFVRKKSDDLLVAGKLLIEMVDRGFMPRKFTFNRV 461
E+F++M N TYN LI + ++ +D A +L+ +M+ G P K+T+N +
Sbjct: 490 EEIFDEMEVHGVSRNSVTYNTLIDGLCKSRRVED---AAQLMDQMIMEGQKPDKYTYNSL 546
Query: 462 LNGLLLIGNQGLAKEILRLQSRCGRLP 488
L G+ A +I++ + G P
Sbjct: 547 LTHFCRGGDIKKAADIVQAMTSNGCEP 573
Score = 182 bits (463), Expect = 4e-45, Method: Compositional matrix adjust.
Identities = 129/434 (29%), Positives = 210/434 (48%), Gaps = 15/434 (3%)
Query: 61 HCPSLHWTP-QLVDQIIKRLWNHALKALHFFNILSYHPTYAHSPSSFDHAIDLAARLRDY 119
H +L T +L+D + + + A AL FN+ S P ++ P+ ++ + R +
Sbjct: 42 HSAALSSTDVKLLDSLRSQPDDSA--ALRLFNLASKKPNFSPEPALYEEILLRLGRSGSF 99
Query: 120 RTVWTLVHRMKSLSLGPTQKTFAIIAERYVSAGKADRAVKIFLSM-HEHGCRQSLNSFNT 178
+ ++ MKS TF I+ E Y D + + M E G + + +N
Sbjct: 100 DDMKKILEDMKSSRCEMGTSTFLILIESYAQFELQDEILSVVDWMIDEFGLKPDTHFYNR 159
Query: 179 ILDLLCKE---KKVEKAYNLFKVFRGKFKADVISYNVIANGWCLVKRTNKALEVLKEMVD 235
+L+LL K VE ++ V+ K DV ++NV+ C + A+ +L++M
Sbjct: 160 MLNLLVDGNSLKLVEISHAKMSVW--GIKPDVSTFNVLIKALCRAHQLRPAILMLEDMPS 217
Query: 236 RGLNPNLTTYNIVLKGYFRAGQIEEAWRFFLEMKKRKCEIDVVTYTTIVHGFGVVGEIKR 295
GL P+ T+ V++GY G ++ A R +M + C V+ IVHGF G ++
Sbjct: 218 YGLVPDEKTFTTVMQGYIEEGDLDGALRIREQMVEFGCSWSNVSVNVIVHGFCKEGRVED 277
Query: 296 ARNVFDGMVN-GGVLPSVATYNAMIQVLCKKDSVENAILVFEEMVGKGYMPNSTTYNVVI 354
A N M N G P T+N ++ LCK V++AI + + M+ +GY P+ TYN VI
Sbjct: 278 ALNFIQEMSNQDGFFPDQYTFNTLVNGLCKAGHVKHAIEIMDVMLQEGYDPDVYTYNSVI 337
Query: 355 RGLCHTGEMERALEFVGRMKDDECEPNVQTYNILIRYFCDAGEIERGLELFEKMGSGVCL 414
GLC GE++ A+E + +M +C PN TYN LI C ++E EL + S L
Sbjct: 338 SGLCKLGEVKEAVEVLDQMITRDCSPNTVTYNTLISTLCKENQVEEATELARVLTSKGIL 397
Query: 415 PNLDTYNILISSMFVRKKSDDLLVAGKLLIEMVDRGFMPRKFTFNRVLNGLLLIGNQGLA 474
P++ T+N LI + + + VA +L EM +G P +FT+N +++ L G A
Sbjct: 398 PDVCTFNSLIQGLCLTRNHR---VAMELFEEMRSKGCEPDEFTYNMLIDSLCSKGKLDEA 454
Query: 475 KEILRLQ--SRCGR 486
+L+ S C R
Sbjct: 455 LNMLKQMELSGCAR 468
Score = 172 bits (435), Expect = 8e-42, Method: Compositional matrix adjust.
Identities = 103/371 (27%), Positives = 183/371 (49%), Gaps = 8/371 (2%)
Query: 86 ALHFFNILSYHPTYAHSPSSFDHAIDLAARLRDYRTVWTLVHRMKSLSLGPTQKTFAIIA 145
AL+F +S + +F+ ++ + + ++ M P T+ +
Sbjct: 278 ALNFIQEMSNQDGFFPDQYTFNTLVNGLCKAGHVKHAIEIMDVMLQEGYDPDVYTYNSVI 337
Query: 146 ERYVSAGKADRAVKIFLSMHEHGCRQSLNSFNTILDLLCKEKKVEKAYNLFKVFRGK-FK 204
G+ AV++ M C + ++NT++ LCKE +VE+A L +V K
Sbjct: 338 SGLCKLGEVKEAVEVLDQMITRDCSPNTVTYNTLISTLCKENQVEEATELARVLTSKGIL 397
Query: 205 ADVISYNVIANGWCLVKRTNKALEVLKEMVDRGLNPNLTTYNIVLKGYFRAGQIEEAWRF 264
DV ++N + G CL + A+E+ +EM +G P+ TYN+++ G+++EA
Sbjct: 398 PDVCTFNSLIQGLCLTRNHRVAMELFEEMRSKGCEPDEFTYNMLIDSLCSKGKLDEALNM 457
Query: 265 FLEMKKRKCEIDVVTYTTIVHGFGVVGEIKRARNVFDGMVNGGVLPSVATYNAMIQVLCK 324
+M+ C V+TY T++ GF + + A +FD M GV + TYN +I LCK
Sbjct: 458 LKQMELSGCARSVITYNTLIDGFCKANKTREAEEIFDEMEVHGVSRNSVTYNTLIDGLCK 517
Query: 325 KDSVENAILVFEEMVGKGYMPNSTTYNVVIRGLCHTGEMERALEFVGRMKDDECEPNVQT 384
VE+A + ++M+ +G P+ TYN ++ C G++++A + V M + CEP++ T
Sbjct: 518 SRRVEDAAQLMDQMIMEGQKPDKYTYNSLLTHFCRGGDIKKAADIVQAMTSNGCEPDIVT 577
Query: 385 YNILIRYFCDAGEIERGLELFEKMG-SGVCL-PNLDTYNILISSMFVRKKSDDLLVAGKL 442
Y LI C AG +E +L + G+ L P+ YN +I +F ++K+ + A L
Sbjct: 578 YGTLISGLCKAGRVEVASKLLRSIQMKGINLTPH--AYNPVIQGLFRKRKTTE---AINL 632
Query: 443 LIEMVDRGFMP 453
EM+++ P
Sbjct: 633 FREMLEQNEAP 643
Score = 135 bits (339), Expect = 8e-31, Method: Compositional matrix adjust.
Identities = 76/269 (28%), Positives = 135/269 (50%), Gaps = 3/269 (1%)
Query: 105 SFDHAIDLAARLRDYRTVWTLVHRMKSLSLGPTQKTFAIIAERYVSAGKADRAVKIFLSM 164
+F+ I R++R L M+S P + T+ ++ + S GK D A+ + M
Sbjct: 402 TFNSLIQGLCLTRNHRVAMELFEEMRSKGCEPDEFTYNMLIDSLCSKGKLDEALNMLKQM 461
Query: 165 HEHGCRQSLNSFNTILDLLCKEKKVEKAYNLFKVFR-GKFKADVISYNVIANGWCLVKRT 223
GC +S+ ++NT++D CK K +A +F + ++YN + +G C +R
Sbjct: 462 ELSGCARSVITYNTLIDGFCKANKTREAEEIFDEMEVHGVSRNSVTYNTLIDGLCKSRRV 521
Query: 224 NKALEVLKEMVDRGLNPNLTTYNIVLKGYFRAGQIEEAWRFFLEMKKRKCEIDVVTYTTI 283
A +++ +M+ G P+ TYN +L + R G I++A M CE D+VTY T+
Sbjct: 522 EDAAQLMDQMIMEGQKPDKYTYNSLLTHFCRGGDIKKAADIVQAMTSNGCEPDIVTYGTL 581
Query: 284 VHGFGVVGEIKRARNVFDGMVNGGVLPSVATYNAMIQVLCKKDSVENAILVFEEMVGKGY 343
+ G G ++ A + + G+ + YN +IQ L +K AI +F EM+ +
Sbjct: 582 ISGLCKAGRVEVASKLLRSIQMKGINLTPHAYNPVIQGLFRKRKTTEAINLFREMLEQNE 641
Query: 344 MP-NSTTYNVVIRGLCH-TGEMERALEFV 370
P ++ +Y +V RGLC+ G + A++F+
Sbjct: 642 APPDAVSYRIVFRGLCNGGGPIREAVDFL 670
>sp|Q9LN22|PPR54_ARATH Pentatricopeptide repeat-containing protein At1g20300,
mitochondrial OS=Arabidopsis thaliana GN=At1g20300 PE=2
SV=1
Length = 537
Score = 204 bits (519), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 114/381 (29%), Positives = 200/381 (52%), Gaps = 14/381 (3%)
Query: 59 TLHCPSLHWT--------PQLVDQIIKRLWN--HAL---KALHFFNILSYHPTYAH-SPS 104
TLH SL ++ P +V +I++ + H + ++L FFN + Y H SP
Sbjct: 93 TLHALSLDFSQIETSQVSPSVVRCVIEKCGSVRHGIPLHQSLAFFNWATSRDDYDHKSPH 152
Query: 105 SFDHAIDLAARLRDYRTVWTLVHRMKSLSLGPTQKTFAIIAERYVSAGKADRAVKIFLSM 164
++ IDL+ ++R + W L+ MKS ++ + +TF I+ RYV AG A AV F M
Sbjct: 153 PYNEMIDLSGKVRQFDLAWHLIDLMKSRNVEISIETFTILIRRYVRAGLASEAVHCFNRM 212
Query: 165 HEHGCRQSLNSFNTILDLLCKEKKVEKAYNLFKVFRGKFKADVISYNVIANGWCLVKRTN 224
++GC +F+ ++ L ++++ +A + F + +F+ DVI Y + GWC +
Sbjct: 213 EDYGCVPDKIAFSIVISNLSRKRRASEAQSFFDSLKDRFEPDVIVYTNLVRGWCRAGEIS 272
Query: 225 KALEVLKEMVDRGLNPNLTTYNIVLKGYFRAGQIEEAWRFFLEMKKRKCEIDVVTYTTIV 284
+A +V KEM G+ PN+ TY+IV+ R GQI A F +M C + +T+ ++
Sbjct: 273 EAEKVFKEMKLAGIEPNVYTYSIVIDALCRCGQISRAHDVFADMLDSGCAPNAITFNNLM 332
Query: 285 HGFGVVGEIKRARNVFDGMVNGGVLPSVATYNAMIQVLCKKDSVENAILVFEEMVGKGYM 344
G ++ V++ M G P TYN +I+ C+ +++ENA+ V M+ K
Sbjct: 333 RVHVKAGRTEKVLQVYNQMKKLGCEPDTITYNFLIEAHCRDENLENAVKVLNTMIKKKCE 392
Query: 345 PNSTTYNVVIRGLCHTGEMERALEFVGRMKDDECEPNVQTYNILIRYFCDAGEIERGLEL 404
N++T+N + R + ++ A +M + +CEPN TYNIL+R F + + L++
Sbjct: 393 VNASTFNTIFRYIEKKRDVNGAHRMYSKMMEAKCEPNTVTYNILMRMFVGSKSTDMVLKM 452
Query: 405 FEKMGSGVCLPNLDTYNILIS 425
++M PN++TY +L++
Sbjct: 453 KKEMDDKEVEPNVNTYRLLVT 473
Score = 75.9 bits (185), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 49/183 (26%), Positives = 86/183 (46%), Gaps = 4/183 (2%)
Query: 280 YTTIVHGFGVVGEIKRARNVFDGMVNGGVLPSVATYNAMIQVLCKKDSVENAILVFEEMV 339
Y ++ G V + A ++ D M + V S+ T+ +I+ + A+ F M
Sbjct: 154 YNEMIDLSGKVRQFDLAWHLIDLMKSRNVEISIETFTILIRRYVRAGLASEAVHCFNRME 213
Query: 340 GKGYMPNSTTYNVVIRGLCHTGEMERALEFVGRMKDDECEPNVQTYNILIRYFCDAGEIE 399
G +P+ +++VI L A F +KD EP+V Y L+R +C AGEI
Sbjct: 214 DYGCVPDKIAFSIVISNLSRKRRASEAQSFFDSLKD-RFEPDVIVYTNLVRGWCRAGEIS 272
Query: 400 RGLELFEKMGSGVCLPNLDTYNILISSMFVRKKSDDLLVAGKLLIEMVDRGFMPRKFTFN 459
++F++M PN+ TY+I+I ++ + + A + +M+D G P TFN
Sbjct: 273 EAEKVFKEMKLAGIEPNVYTYSIVIDALC---RCGQISRAHDVFADMLDSGCAPNAITFN 329
Query: 460 RVL 462
++
Sbjct: 330 NLM 332
>sp|Q6NQ83|PP247_ARATH Pentatricopeptide repeat-containing protein At3g22470,
mitochondrial OS=Arabidopsis thaliana GN=At3g22470 PE=2
SV=1
Length = 619
Score = 201 bits (510), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 111/368 (30%), Positives = 186/368 (50%), Gaps = 4/368 (1%)
Query: 125 LVHRMKSLSLGPTQKTFAIIAERYVSAGKADRAVKIFLSMHEHGCRQSLNSFNTILDLLC 184
L+ RM P + T+ + R +G + A+ +F M E + S+ ++ ++D LC
Sbjct: 197 LIDRMVEYGFQPDEVTYGPVLNRLCKSGNSALALDLFRKMEERNIKASVVQYSIVIDSLC 256
Query: 185 KEKKVEKAYNLFKVFRGK-FKADVISYNVIANGWCLVKRTNKALEVLKEMVDRGLNPNLT 243
K+ + A +LF K KADV++Y+ + G C + + ++L+EM+ R + P++
Sbjct: 257 KDGSFDDALSLFNEMEMKGIKADVVTYSSLIGGLCNDGKWDDGAKMLREMIGRNIIPDVV 316
Query: 244 TYNIVLKGYFRAGQIEEAWRFFLEMKKRKCEIDVVTYTTIVHGFGVVGEIKRARNVFDGM 303
T++ ++ + + G++ EA + EM R D +TY +++ GF + A +FD M
Sbjct: 317 TFSALIDVFVKEGKLLEAKELYNEMITRGIAPDTITYNSLIDGFCKENCLHEANQMFDLM 376
Query: 304 VNGGVLPSVATYNAMIQVLCKKDSVENAILVFEEMVGKGYMPNSTTYNVVIRGLCHTGEM 363
V+ G P + TY+ +I CK V++ + +F E+ KG +PN+ TYN ++ G C +G++
Sbjct: 377 VSKGCEPDIVTYSILINSYCKAKRVDDGMRLFREISSKGLIPNTITYNTLVLGFCQSGKL 436
Query: 364 ERALEFVGRMKDDECEPNVQTYNILIRYFCDAGEIERGLELFEKMGSGVCLPNLDTYNIL 423
A E M P+V TY IL+ CD GE+ + LE+FEKM + YNI+
Sbjct: 437 NAAKELFQEMVSRGVPPSVVTYGILLDGLCDNGELNKALEIFEKMQKSRMTLGIGIYNII 496
Query: 424 ISSMFVRKKSDDLLVAGKLLIEMVDRGFMPRKFTFNRVLNGLLLIGNQGLAKEILRLQSR 483
I M K DD A L + D+G P T+N ++ GL G+ A + R
Sbjct: 497 IHGMCNASKVDD---AWSLFCSLSDKGVKPDVVTYNVMIGGLCKKGSLSEADMLFRKMKE 553
Query: 484 CGRLPRQF 491
G P F
Sbjct: 554 DGCTPDDF 561
Score = 158 bits (400), Expect = 9e-38, Method: Compositional matrix adjust.
Identities = 91/312 (29%), Positives = 161/312 (51%), Gaps = 4/312 (1%)
Query: 125 LVHRMKSLSLGPTQKTFAIIAERYVSAGKADRAVKIFLSMHEHGCRQSLNSFNTILDLLC 184
++ M ++ P TF+ + + +V GK A +++ M G ++N+++D C
Sbjct: 302 MLREMIGRNIIPDVVTFSALIDVFVKEGKLLEAKELYNEMITRGIAPDTITYNSLIDGFC 361
Query: 185 KEKKVEKAYNLFKVFRGK-FKADVISYNVIANGWCLVKRTNKALEVLKEMVDRGLNPNLT 243
KE + +A +F + K + D+++Y+++ N +C KR + + + +E+ +GL PN
Sbjct: 362 KENCLHEANQMFDLMVSKGCEPDIVTYSILINSYCKAKRVDDGMRLFREISSKGLIPNTI 421
Query: 244 TYNIVLKGYFRAGQIEEAWRFFLEMKKRKCEIDVVTYTTIVHGFGVVGEIKRARNVFDGM 303
TYN ++ G+ ++G++ A F EM R VVTY ++ G GE+ +A +F+ M
Sbjct: 422 TYNTLVLGFCQSGKLNAAKELFQEMVSRGVPPSVVTYGILLDGLCDNGELNKALEIFEKM 481
Query: 304 VNGGVLPSVATYNAMIQVLCKKDSVENAILVFEEMVGKGYMPNSTTYNVVIRGLCHTGEM 363
+ + YN +I +C V++A +F + KG P+ TYNV+I GLC G +
Sbjct: 482 QKSRMTLGIGIYNIIIHGMCNASKVDDAWSLFCSLSDKGVKPDVVTYNVMIGGLCKKGSL 541
Query: 364 ERALEFVGRMKDDECEPNVQTYNILIRYFCDAGEIERGLELFEKMGSGVCLPNLDTYNI- 422
A +MK+D C P+ TYNILIR + +EL E+M VC + D+ I
Sbjct: 542 SEADMLFRKMKEDGCTPDDFTYNILIRAHLGGSGLISSVELIEEM--KVCGFSADSSTIK 599
Query: 423 LISSMFVRKKSD 434
++ M ++ D
Sbjct: 600 MVIDMLSDRRLD 611
Score = 157 bits (397), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 109/404 (26%), Positives = 193/404 (47%), Gaps = 11/404 (2%)
Query: 81 NHALKALHFFNILSYHPTYAHSPSSFDHAIDLAARLRDYRTVWTLVHRMKSLSLGPTQKT 140
N AL AL F + A S + ID + + +L + M+ + T
Sbjct: 225 NSAL-ALDLFRKMEERNIKA-SVVQYSIVIDSLCKDGSFDDALSLFNEMEMKGIKADVVT 282
Query: 141 FAIIAERYVSAGKADRAVKIFLSMHEHGCRQSLNSFNTILDLLCKEKKVEKAYNLFK--V 198
++ + + GK D K+ M + +F+ ++D+ KE K+ +A L+ +
Sbjct: 283 YSSLIGGLCNDGKWDDGAKMLREMIGRNIIPDVVTFSALIDVFVKEGKLLEAKELYNEMI 342
Query: 199 FRGKFKADVISYNVIANGWCLVKRTNKALEVLKEMVDRGLNPNLTTYNIVLKGYFRAGQI 258
RG D I+YN + +G+C ++A ++ MV +G P++ TY+I++ Y +A ++
Sbjct: 343 TRG-IAPDTITYNSLIDGFCKENCLHEANQMFDLMVSKGCEPDIVTYSILINSYCKAKRV 401
Query: 259 EEAWRFFLEMKKRKCEIDVVTYTTIVHGFGVVGEIKRARNVFDGMVNGGVLPSVATYNAM 318
++ R F E+ + + +TY T+V GF G++ A+ +F MV+ GV PSV TY +
Sbjct: 402 DDGMRLFREISSKGLIPNTITYNTLVLGFCQSGKLNAAKELFQEMVSRGVPPSVVTYGIL 461
Query: 319 IQVLCKKDSVENAILVFEEMVGKGYMPNSTTYNVVIRGLCHTGEMERALEFVGRMKDDEC 378
+ LC + A+ +FE+M YN++I G+C+ +++ A + D
Sbjct: 462 LDGLCDNGELNKALEIFEKMQKSRMTLGIGIYNIIIHGMCNASKVDDAWSLFCSLSDKGV 521
Query: 379 EPNVQTYNILIRYFCDAGEIERGLELFEKMGSGVCLPNLDTYNILISSMFVRKKSDDLLV 438
+P+V TYN++I C G + LF KM C P+ TYNILI + L+
Sbjct: 522 KPDVVTYNVMIGGLCKKGSLSEADMLFRKMKEDGCTPDDFTYNILIRAHL---GGSGLIS 578
Query: 439 AGKLLIEMVDRGFMPRKFTFNRVLNGLLLIGNQGLAKEILRLQS 482
+ +L+ EM GF T V++ ++ ++ L K L + S
Sbjct: 579 SVELIEEMKVCGFSADSSTIKMVID---MLSDRRLDKSFLDMLS 619
Score = 146 bits (369), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 110/429 (25%), Positives = 195/429 (45%), Gaps = 13/429 (3%)
Query: 57 TQTLHCPS-----LHWTPQLVDQIIKRLWNHALKALHFFNILSYHPTYAHSPSSFDHAID 111
T LH S L + +L + I+ N A+ F +++ P +P F+
Sbjct: 23 TSLLHYSSITEAKLSYKERLRNGIVDIKVNDAIDL--FESMIQSRPL--PTPIDFNRLCS 78
Query: 112 LAARLRDYRTVWTLVHRMKSLSLGPTQKTFAIIAERYVSAGKADRAVKIFLSMHEHGCRQ 171
AR + Y V M+ + T I+ Y K A + + G
Sbjct: 79 AVARTKQYDLVLGFCKGMELNGIEHDMYTMTIMINCYCRKKKLLFAFSVLGRAWKLGYEP 138
Query: 172 SLNSFNTILDLLCKEKKVEKAYNLF-KVFRGKFKADVISYNVIANGWCLVKRTNKALEVL 230
+F+T+++ C E +V +A L ++ K + D+++ + + NG CL R ++AL ++
Sbjct: 139 DTITFSTLVNGFCLEGRVSEAVALVDRMVEMKQRPDLVTVSTLINGLCLKGRVSEALVLI 198
Query: 231 KEMVDRGLNPNLTTYNIVLKGYFRAGQIEEAWRFFLEMKKRKCEIDVVTYTTIVHGFGVV 290
MV+ G P+ TY VL ++G A F +M++R + VV Y+ ++
Sbjct: 199 DRMVEYGFQPDEVTYGPVLNRLCKSGNSALALDLFRKMEERNIKASVVQYSIVIDSLCKD 258
Query: 291 GEIKRARNVFDGMVNGGVLPSVATYNAMIQVLCKKDSVENAILVFEEMVGKGYMPNSTTY 350
G A ++F+ M G+ V TY+++I LC ++ + EM+G+ +P+ T+
Sbjct: 259 GSFDDALSLFNEMEMKGIKADVVTYSSLIGGLCNDGKWDDGAKMLREMIGRNIIPDVVTF 318
Query: 351 NVVIRGLCHTGEMERALEFVGRMKDDECEPNVQTYNILIRYFCDAGEIERGLELFEKMGS 410
+ +I G++ A E M P+ TYN LI FC + ++F+ M S
Sbjct: 319 SALIDVFVKEGKLLEAKELYNEMITRGIAPDTITYNSLIDGFCKENCLHEANQMFDLMVS 378
Query: 411 GVCLPNLDTYNILISSMFVRKKSDDLLVAGKLLIEMVDRGFMPRKFTFNRVLNGLLLIGN 470
C P++ TY+ILI+S K+ DD + +L E+ +G +P T+N ++ G G
Sbjct: 379 KGCEPDIVTYSILINSYCKAKRVDDGM---RLFREISSKGLIPNTITYNTLVLGFCQSGK 435
Query: 471 QGLAKEILR 479
AKE+ +
Sbjct: 436 LNAAKELFQ 444
>sp|Q9SXD1|PPR91_ARATH Pentatricopeptide repeat-containing protein At1g62670,
mitochondrial OS=Arabidopsis thaliana GN=At1g62670 PE=2
SV=2
Length = 630
Score = 193 bits (491), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 107/366 (29%), Positives = 189/366 (51%), Gaps = 4/366 (1%)
Query: 124 TLVHRMKSLSLGPTQKTFAIIAERYVSAGKADRAVKIFLSMHEHGCRQSLNSFNTILDLL 183
L+ RM + P T+ ++ G D A + M + + +NTI+D L
Sbjct: 207 ALIDRMVAKGCQPDLVTYGVVVNGLCKRGDTDLAFNLLNKMEQGKLEPGVLIYNTIIDGL 266
Query: 184 CKEKKVEKAYNLFKVFRGK-FKADVISYNVIANGWCLVKRTNKALEVLKEMVDRGLNPNL 242
CK K ++ A NLFK K + +V++Y+ + + C R + A +L +M++R +NP++
Sbjct: 267 CKYKHMDDALNLFKEMETKGIRPNVVTYSSLISCLCNYGRWSDASRLLSDMIERKINPDV 326
Query: 243 TTYNIVLKGYFRAGQIEEAWRFFLEMKKRKCEIDVVTYTTIVHGFGVVGEIKRARNVFDG 302
T++ ++ + + G++ EA + + EM KR + +VTY+++++GF + + A+ +F+
Sbjct: 327 FTFSALIDAFVKEGKLVEAEKLYDEMVKRSIDPSIVTYSSLINGFCMHDRLDEAKQMFEF 386
Query: 303 MVNGGVLPSVATYNAMIQVLCKKDSVENAILVFEEMVGKGYMPNSTTYNVVIRGLCHTGE 362
MV+ P V TYN +I+ CK VE + VF EM +G + N+ TYN++I+GL G+
Sbjct: 387 MVSKHCFPDVVTYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYNILIQGLFQAGD 446
Query: 363 MERALEFVGRMKDDECEPNVQTYNILIRYFCDAGEIERGLELFEKMGSGVCLPNLDTYNI 422
+ A E M D PN+ TYN L+ C G++E+ + +FE + P + TYNI
Sbjct: 447 CDMAQEIFKEMVSDGVPPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPTIYTYNI 506
Query: 423 LISSMFVRKKSDDLLVAGKLLIEMVDRGFMPRKFTFNRVLNGLLLIGNQGLAKEILRLQS 482
+I M K +D L + +G P +N +++G G++ A + +
Sbjct: 507 MIEGMCKAGKVED---GWDLFCNLSLKGVKPDVVAYNTMISGFCRKGSKEEADALFKEMK 563
Query: 483 RCGRLP 488
G LP
Sbjct: 564 EDGTLP 569
Score = 168 bits (425), Expect = 9e-41, Method: Compositional matrix adjust.
Identities = 103/379 (27%), Positives = 184/379 (48%), Gaps = 6/379 (1%)
Query: 90 FNILSYHPTYAHSPSS--FDHAIDLAARLRDYRTVWTLVHRMKSLSLGPTQKTFAIIAER 147
FN+L+ P ++ ID + + L M++ + P T++ +
Sbjct: 241 FNLLNKMEQGKLEPGVLIYNTIIDGLCKYKHMDDALNLFKEMETKGIRPNVVTYSSLISC 300
Query: 148 YVSAGKADRAVKIFLSMHEHGCRQSLNSFNTILDLLCKEKKVEKAYNLF-KVFRGKFKAD 206
+ G+ A ++ M E + +F+ ++D KE K+ +A L+ ++ +
Sbjct: 301 LCNYGRWSDASRLLSDMIERKINPDVFTFSALIDAFVKEGKLVEAEKLYDEMVKRSIDPS 360
Query: 207 VISYNVIANGWCLVKRTNKALEVLKEMVDRGLNPNLTTYNIVLKGYFRAGQIEEAWRFFL 266
+++Y+ + NG+C+ R ++A ++ + MV + P++ TYN ++KG+ + ++EE F
Sbjct: 361 IVTYSSLINGFCMHDRLDEAKQMFEFMVSKHCFPDVVTYNTLIKGFCKYKRVEEGMEVFR 420
Query: 267 EMKKRKCEIDVVTYTTIVHGFGVVGEIKRARNVFDGMVNGGVLPSVATYNAMIQVLCKKD 326
EM +R + VTY ++ G G+ A+ +F MV+ GV P++ TYN ++ LCK
Sbjct: 421 EMSQRGLVGNTVTYNILIQGLFQAGDCDMAQEIFKEMVSDGVPPNIMTYNTLLDGLCKNG 480
Query: 327 SVENAILVFEEMVGKGYMPNSTTYNVVIRGLCHTGEMERALEFVGRMKDDECEPNVQTYN 386
+E A++VFE + P TYN++I G+C G++E + + +P+V YN
Sbjct: 481 KLEKAMVVFEYLQRSKMEPTIYTYNIMIEGMCKAGKVEDGWDLFCNLSLKGVKPDVVAYN 540
Query: 387 ILIRYFCDAGEIERGLELFEKMGSGVCLPNLDTYNILISSMFVRKKSDDLLVAGKLLIEM 446
+I FC G E LF++M LPN YN LI + R + D + +L+ EM
Sbjct: 541 TMISGFCRKGSKEEADALFKEMKEDGTLPNSGCYNTLIRA---RLRDGDREASAELIKEM 597
Query: 447 VDRGFMPRKFTFNRVLNGL 465
GF T V N L
Sbjct: 598 RSCGFAGDASTIGLVTNML 616
Score = 144 bits (362), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 98/380 (25%), Positives = 179/380 (47%), Gaps = 39/380 (10%)
Query: 136 PTQKTFAIIAERYVSAGKADRAVKIFLSMHEHGCRQSLNSFNTILDLLCKEKKVEKAYNL 195
P+ F+ + K D + + M G + +++ +++ C+ ++ A +
Sbjct: 79 PSIIEFSKLLSAIAKMNKFDVVISLGEQMQNLGIPHNHYTYSILINCFCRRSQLPLALAV 138
Query: 196 F-KVFRGKFKADVISYNVIANGWCLVKRTNKALEVLKEMVDRGLNPNLTTYNIVLKGYFR 254
K+ + ++ ++++ + + NG+C KR ++A+ ++ +M G PN T+N ++ G F
Sbjct: 139 LGKMMKLGYEPNIVTLSSLLNGYCHSKRISEAVALVDQMFVTGYQPNTVTFNTLIHGLFL 198
Query: 255 AGQIEEAWRFFLEMKKRKCEIDVVTYTTIVHGFGVVGEIKRARNVFDGMVNGGVLPSVAT 314
+ EA M + C+ D+VTY +V+G G+ A N+ + M G + P V
Sbjct: 199 HNKASEAMALIDRMVAKGCQPDLVTYGVVVNGLCKRGDTDLAFNLLNKMEQGKLEPGVLI 258
Query: 315 YNAMIQVLCKKDSVENAILVFEEMVGKGYMPNSTTYNVVIRGLCHTGE-----------M 363
YN +I LCK +++A+ +F+EM KG PN TY+ +I LC+ G +
Sbjct: 259 YNTIIDGLCKYKHMDDALNLFKEMETKGIRPNVVTYSSLISCLCNYGRWSDASRLLSDMI 318
Query: 364 ERALE------------FVGRMKDDECE------------PNVQTYNILIRYFCDAGEIE 399
ER + FV K E E P++ TY+ LI FC ++
Sbjct: 319 ERKINPDVFTFSALIDAFVKEGKLVEAEKLYDEMVKRSIDPSIVTYSSLINGFCMHDRLD 378
Query: 400 RGLELFEKMGSGVCLPNLDTYNILISSMFVRKKSDDLLVAGKLLIEMVDRGFMPRKFTFN 459
++FE M S C P++ TYN LI K+ ++ + ++ EM RG + T+N
Sbjct: 379 EAKQMFEFMVSKHCFPDVVTYNTLIKGFCKYKRVEEGM---EVFREMSQRGLVGNTVTYN 435
Query: 460 RVLNGLLLIGNQGLAKEILR 479
++ GL G+ +A+EI +
Sbjct: 436 ILIQGLFQAGDCDMAQEIFK 455
Score = 78.6 bits (192), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 49/209 (23%), Positives = 102/209 (48%), Gaps = 3/209 (1%)
Query: 257 QIEEAWRFFLEMKKRKCEIDVVTYTTIVHGFGVVGEIKRARNVFDGMVNGGVLPSVATYN 316
++++A F EM K + ++ ++ ++ + + ++ + M N G+ + TY+
Sbjct: 61 KLDDAVALFGEMVKSRPFPSIIEFSKLLSAIAKMNKFDVVISLGEQMQNLGIPHNHYTYS 120
Query: 317 AMIQVLCKKDSVENAILVFEEMVGKGYMPNSTTYNVVIRGLCHTGEMERALEFVGRMKDD 376
+I C++ + A+ V +M+ GY PN T + ++ G CH+ + A+ V +M
Sbjct: 121 ILINCFCRRSQLPLALAVLGKMMKLGYEPNIVTLSSLLNGYCHSKRISEAVALVDQMFVT 180
Query: 377 ECEPNVQTYNILIRYFCDAGEIERGLELFEKMGSGVCLPNLDTYNILISSMFVRKKSDDL 436
+PN T+N LI + + L ++M + C P+L TY ++++ + R +D
Sbjct: 181 GYQPNTVTFNTLIHGLFLHNKASEAMALIDRMVAKGCQPDLVTYGVVVNGLCKRGDTD-- 238
Query: 437 LVAGKLLIEMVDRGFMPRKFTFNRVLNGL 465
+A LL +M P +N +++GL
Sbjct: 239 -LAFNLLNKMEQGKLEPGVLIYNTIIDGL 266
>sp|Q3ECK2|PPR92_ARATH Pentatricopeptide repeat-containing protein At1g62680,
mitochondrial OS=Arabidopsis thaliana GN=At1g62680 PE=2
SV=2
Length = 548
Score = 192 bits (489), Expect = 4e-48, Method: Compositional matrix adjust.
Identities = 108/361 (29%), Positives = 191/361 (52%), Gaps = 7/361 (1%)
Query: 124 TLVHRMKSLSLGPTQKTFAIIAERYVSAGKADRAVKIFLSMHEHGCRQSLNSFNTILDLL 183
+++ +M L P + T + + + AV + M E G + + ++N I+D L
Sbjct: 141 SILGKMLKLGYEPDRVTIGSLVNGFCRRNRVSDAVSLVDKMVEIGYKPDIVAYNAIIDSL 200
Query: 184 CKEKKVEKAYNLFK-VFRGKFKADVISYNVIANGWCLVKRTNKALEVLKEMVDRGLNPNL 242
CK K+V A++ FK + R + +V++Y + NG C R + A +L +M+ + + PN+
Sbjct: 201 CKTKRVNDAFDFFKEIERKGIRPNVVTYTALVNGLCNSSRWSDAARLLSDMIKKKITPNV 260
Query: 243 TTYNIVLKGYFRAGQIEEAWRFFLEMKKRKCEIDVVTYTTIVHGFGVVGEIKRARNVFDG 302
TY+ +L + + G++ EA F EM + + D+VTY+++++G + I A +FD
Sbjct: 261 ITYSALLDAFVKNGKVLEAKELFEEMVRMSIDPDIVTYSSLINGLCLHDRIDEANQMFDL 320
Query: 303 MVNGGVLPSVATYNAMIQVLCKKDSVENAILVFEEMVGKGYMPNSTTYNVVIRGLCHTGE 362
MV+ G L V +YN +I CK VE+ + +F EM +G + N+ TYN +I+G G+
Sbjct: 321 MVSKGCLADVVSYNTLINGFCKAKRVEDGMKLFREMSQRGLVSNTVTYNTLIQGFFQAGD 380
Query: 363 MERALEFVGRMKDDECEPNVQTYNILIRYFCDAGEIERGLELFEKMGSGVCLPNLDTYNI 422
+++A EF +M P++ TYNIL+ CD GE+E+ L +FE M ++ TY
Sbjct: 381 VDKAQEFFSQMDFFGISPDIWTYNILLGGLCDNGELEKALVIFEDMQKREMDLDIVTYTT 440
Query: 423 LISSMFVRKKSDDLLVAGKLLIEMVDRGFMPRKFTFNRVLNGLLLIGNQGLAKEILRLQS 482
+I M K ++ A L + +G P T+ +++GL +GL E+ L +
Sbjct: 441 VIRGMCKTGKVEE---AWSLFCSLSLKGLKPDIVTYTTMMSGLC---TKGLLHEVEALYT 494
Query: 483 R 483
+
Sbjct: 495 K 495
Score = 143 bits (361), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 84/356 (23%), Positives = 171/356 (48%), Gaps = 12/356 (3%)
Query: 99 YAHSPSSFDHAIDLAARLRDYRTVWTLVHRMKSLSLGPTQKTFAIIAERYVSAGKADRAV 158
Y +++ ID + + + ++ + P T+ + ++ + A
Sbjct: 186 YKPDIVAYNAIIDSLCKTKRVNDAFDFFKEIERKGIRPNVVTYTALVNGLCNSSRWSDAA 245
Query: 159 KIFLSMHEHGCRQSLNSFNTILDLLCKEKKVEKAYNLFK-VFRGKFKADVISYNVIANGW 217
++ M + ++ +++ +LD K KV +A LF+ + R D+++Y+ + NG
Sbjct: 246 RLLSDMIKKKITPNVITYSALLDAFVKNGKVLEAKELFEEMVRMSIDPDIVTYSSLINGL 305
Query: 218 CLVKRTNKALEVLKEMVDRGLNPNLTTYNIVLKGYFRAGQIEEAWRFFLEMKKRKCEIDV 277
CL R ++A ++ MV +G ++ +YN ++ G+ +A ++E+ + F EM +R +
Sbjct: 306 CLHDRIDEANQMFDLMVSKGCLADVVSYNTLINGFCKAKRVEDGMKLFREMSQRGLVSNT 365
Query: 278 VTYTTIVHGFGVVGEIKRARNVFDGMVNGGVLPSVATYNAMIQVLCKKDSVENAILVFEE 337
VTY T++ GF G++ +A+ F M G+ P + TYN ++ LC +E A+++FE+
Sbjct: 366 VTYNTLIQGFFQAGDVDKAQEFFSQMDFFGISPDIWTYNILLGGLCDNGELEKALVIFED 425
Query: 338 MVGKGYMPNSTTYNVVIRGLCHTGEMERALEFVGRMKDDECEPNVQTYNILIRYFCDAGE 397
M + + TY VIRG+C TG++E A + +P++ TY ++ C G
Sbjct: 426 MQKREMDLDIVTYTTVIRGMCKTGKVEEAWSLFCSLSLKGLKPDIVTYTTMMSGLCTKGL 485
Query: 398 IERGLELFEKMGSGVCLPNLDTYNILISSMFVRKKSDDLLVAGKLLIEMVDRGFMP 453
+ L+ KM + N T + D+ ++ +L+ +M+ G+ P
Sbjct: 486 LHEVEALYTKMKQEGLMKNDCTLS-----------DGDITLSAELIKKMLSCGYAP 530
Score = 124 bits (312), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 83/325 (25%), Positives = 153/325 (47%), Gaps = 4/325 (1%)
Query: 153 KADRAVKIFLSMHEHGCRQSLNSFNTILDLLCKEKKVEKAYNLFKVFRG-KFKADVISYN 211
K + A+ +F M + S+ FN +L + K KK + +L K + D+ ++N
Sbjct: 65 KLNDAIDLFSDMVKSRPFPSIVDFNRLLSAIVKLKKYDVVISLGKKMEVLGIRNDLYTFN 124
Query: 212 VIANGWCLVKRTNKALEVLKEMVDRGLNPNLTTYNIVLKGYFRAGQIEEAWRFFLEMKKR 271
++ N +C + + AL +L +M+ G P+ T ++ G+ R ++ +A +M +
Sbjct: 125 IVINCFCCCFQVSLALSILGKMLKLGYEPDRVTIGSLVNGFCRRNRVSDAVSLVDKMVEI 184
Query: 272 KCEIDVVTYTTIVHGFGVVGEIKRARNVFDGMVNGGVLPSVATYNAMIQVLCKKDSVENA 331
+ D+V Y I+ + A + F + G+ P+V TY A++ LC +A
Sbjct: 185 GYKPDIVAYNAIIDSLCKTKRVNDAFDFFKEIERKGIRPNVVTYTALVNGLCNSSRWSDA 244
Query: 332 ILVFEEMVGKGYMPNSTTYNVVIRGLCHTGEMERALEFVGRMKDDECEPNVQTYNILIRY 391
+ +M+ K PN TY+ ++ G++ A E M +P++ TY+ LI
Sbjct: 245 ARLLSDMIKKKITPNVITYSALLDAFVKNGKVLEAKELFEEMVRMSIDPDIVTYSSLING 304
Query: 392 FCDAGEIERGLELFEKMGSGVCLPNLDTYNILISSMFVRKKSDDLLVAGKLLIEMVDRGF 451
C I+ ++F+ M S CL ++ +YN LI+ K+ +D + KL EM RG
Sbjct: 305 LCLHDRIDEANQMFDLMVSKGCLADVVSYNTLINGFCKAKRVEDGM---KLFREMSQRGL 361
Query: 452 MPRKFTFNRVLNGLLLIGNQGLAKE 476
+ T+N ++ G G+ A+E
Sbjct: 362 VSNTVTYNTLIQGFFQAGDVDKAQE 386
Score = 120 bits (300), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 79/282 (28%), Positives = 142/282 (50%), Gaps = 4/282 (1%)
Query: 185 KEKKVEKAYNLFK-VFRGKFKADVISYNVIANGWCLVKRTNKALEVLKEMVDRGLNPNLT 243
++ K+ A +LF + + + ++ +N + + +K+ + + + K+M G+ +L
Sbjct: 62 RDIKLNDAIDLFSDMVKSRPFPSIVDFNRLLSAIVKLKKYDVVISLGKKMEVLGIRNDLY 121
Query: 244 TYNIVLKGYFRAGQIEEAWRFFLEMKKRKCEIDVVTYTTIVHGFGVVGEIKRARNVFDGM 303
T+NIV+ + Q+ A +M K E D VT ++V+GF + A ++ D M
Sbjct: 122 TFNIVINCFCCCFQVSLALSILGKMLKLGYEPDRVTIGSLVNGFCRRNRVSDAVSLVDKM 181
Query: 304 VNGGVLPSVATYNAMIQVLCKKDSVENAILVFEEMVGKGYMPNSTTYNVVIRGLCHTGEM 363
V G P + YNA+I LCK V +A F+E+ KG PN TY ++ GLC++
Sbjct: 182 VEIGYKPDIVAYNAIIDSLCKTKRVNDAFDFFKEIERKGIRPNVVTYTALVNGLCNSSRW 241
Query: 364 ERALEFVGRMKDDECEPNVQTYNILIRYFCDAGEIERGLELFEKMGSGVCLPNLDTYNIL 423
A + M + PNV TY+ L+ F G++ ELFE+M P++ TY+ L
Sbjct: 242 SDAARLLSDMIKKKITPNVITYSALLDAFVKNGKVLEAKELFEEMVRMSIDPDIVTYSSL 301
Query: 424 ISSMFVRKKSDDLLVAGKLLIEMVDRGFMPRKFTFNRVLNGL 465
I+ + + + D+ A ++ MV +G + ++N ++NG
Sbjct: 302 INGLCLHDRIDE---ANQMFDLMVSKGCLADVVSYNTLINGF 340
>sp|Q9SXD8|PPR90_ARATH Pentatricopeptide repeat-containing protein At1g62590
OS=Arabidopsis thaliana GN=At1g62590 PE=2 SV=1
Length = 634
Score = 191 bits (486), Expect = 8e-48, Method: Compositional matrix adjust.
Identities = 103/343 (30%), Positives = 181/343 (52%), Gaps = 4/343 (1%)
Query: 124 TLVHRMKSLSLGPTQKTFAIIAERYVSAGKADRAVKIFLSMHEHGCRQSLNSFNTILDLL 183
LV RM P T+ ++ G D A+ + M + FNTI+D L
Sbjct: 211 ALVDRMVQRGCQPNLVTYGVVVNGLCKRGDTDLALNLLNKMEAAKIEADVVIFNTIIDSL 270
Query: 184 CKEKKVEKAYNLFKVFRGK-FKADVISYNVIANGWCLVKRTNKALEVLKEMVDRGLNPNL 242
CK + V+ A NLFK K + +V++Y+ + + C R + A ++L +M+++ +NPNL
Sbjct: 271 CKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMIEKKINPNL 330
Query: 243 TTYNIVLKGYFRAGQIEEAWRFFLEMKKRKCEIDVVTYTTIVHGFGVVGEIKRARNVFDG 302
T+N ++ + + G+ EA + + +M KR + D+ TY ++V+GF + + +A+ +F+
Sbjct: 331 VTFNALIDAFVKEGKFVEAEKLYDDMIKRSIDPDIFTYNSLVNGFCMHDRLDKAKQMFEF 390
Query: 303 MVNGGVLPSVATYNAMIQVLCKKDSVENAILVFEEMVGKGYMPNSTTYNVVIRGLCHTGE 362
MV+ P V TYN +I+ CK VE+ +F EM +G + ++ TY +I+GL H G+
Sbjct: 391 MVSKDCFPDVVTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQGLFHDGD 450
Query: 363 MERALEFVGRMKDDECEPNVQTYNILIRYFCDAGEIERGLELFEKMGSGVCLPNLDTYNI 422
+ A + +M D P++ TY+IL+ C+ G++E+ LE+F+ M ++ Y
Sbjct: 451 CDNAQKVFKQMVSDGVPPDIMTYSILLDGLCNNGKLEKALEVFDYMQKSEIKLDIYIYTT 510
Query: 423 LISSMFVRKKSDDLLVAGKLLIEMVDRGFMPRKFTFNRVLNGL 465
+I M K DD L + +G P T+N +++GL
Sbjct: 511 MIEGMCKAGKVDD---GWDLFCSLSLKGVKPNVVTYNTMISGL 550
Score = 156 bits (395), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 97/379 (25%), Positives = 182/379 (48%), Gaps = 4/379 (1%)
Query: 102 SPSSFDHAIDLAARLRDYRTVWTLVHRMKSLSLGPTQKTFAIIAERYVSAGKADRAVKIF 161
S F+ + A+++ + V +L +M+ L + T+ I+ + + A+ +
Sbjct: 84 SIVEFNKLLSAIAKMKKFDVVISLGEKMQRLEIVHGLYTYNILINCFCRRSQISLALALL 143
Query: 162 LSMHEHGCRQSLNSFNTILDLLCKEKKVEKAYNLF-KVFRGKFKADVISYNVIANGWCLV 220
M + G S+ + +++L+ C K++ A L ++ ++ D I++ + +G L
Sbjct: 144 GKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTTLIHGLFLH 203
Query: 221 KRTNKALEVLKEMVDRGLNPNLTTYNIVLKGYFRAGQIEEAWRFFLEMKKRKCEIDVVTY 280
+ ++A+ ++ MV RG PNL TY +V+ G + G + A +M+ K E DVV +
Sbjct: 204 NKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDTDLALNLLNKMEAAKIEADVVIF 263
Query: 281 TTIVHGFGVVGEIKRARNVFDGMVNGGVLPSVATYNAMIQVLCKKDSVENAILVFEEMVG 340
TI+ + A N+F M G+ P+V TY+++I LC +A + +M+
Sbjct: 264 NTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMIE 323
Query: 341 KGYMPNSTTYNVVIRGLCHTGEMERALEFVGRMKDDECEPNVQTYNILIRYFCDAGEIER 400
K PN T+N +I G+ A + M +P++ TYN L+ FC +++
Sbjct: 324 KKINPNLVTFNALIDAFVKEGKFVEAEKLYDDMIKRSIDPDIFTYNSLVNGFCMHDRLDK 383
Query: 401 GLELFEKMGSGVCLPNLDTYNILISSMFVRKKSDDLLVAGKLLIEMVDRGFMPRKFTFNR 460
++FE M S C P++ TYN LI K+ +D +L EM RG + T+
Sbjct: 384 AKQMFEFMVSKDCFPDVVTYNTLIKGFCKSKRVED---GTELFREMSHRGLVGDTVTYTT 440
Query: 461 VLNGLLLIGNQGLAKEILR 479
++ GL G+ A+++ +
Sbjct: 441 LIQGLFHDGDCDNAQKVFK 459
Score = 152 bits (384), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 97/341 (28%), Positives = 156/341 (45%), Gaps = 36/341 (10%)
Query: 106 FDHAIDLAARLRDYRTVWTLVHRMKSLSLGPTQKTFAIIAERYVSAGKADRAVKIFLSMH 165
F+ ID + R L M++ + P T++ + S G+ A ++ M
Sbjct: 263 FNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMI 322
Query: 166 EHGCRQSLNSFNTILDLLCKEKKVEKAYNLFK-VFRGKFKADVISYNVIANGWCLVKRTN 224
E +L +FN ++D KE K +A L+ + + D+ +YN + NG+C+ R +
Sbjct: 323 EKKINPNLVTFNALIDAFVKEGKFVEAEKLYDDMIKRSIDPDIFTYNSLVNGFCMHDRLD 382
Query: 225 KALEVLKEMVDRGLNPNLTTYNIVLKGYFRAGQIEEAWRFFLEMKKRKCEIDVVTYTTIV 284
KA ++ + MV + P++ TYN ++KG+ ++ ++E+ F EM R D VTYTT++
Sbjct: 383 KAKQMFEFMVSKDCFPDVVTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTLI 442
Query: 285 HGFGVVGEIKRARNVFDGMVNGGVLPSVATYNAMIQVLCKKDSVENAILVFEEMVG---- 340
G G+ A+ VF MV+ GV P + TY+ ++ LC +E A+ VF+ M
Sbjct: 443 QGLFHDGDCDNAQKVFKQMVSDGVPPDIMTYSILLDGLCNNGKLEKALEVFDYMQKSEIK 502
Query: 341 -------------------------------KGYMPNSTTYNVVIRGLCHTGEMERALEF 369
KG PN TYN +I GLC ++ A
Sbjct: 503 LDIYIYTTMIEGMCKAGKVDDGWDLFCSLSLKGVKPNVVTYNTMISGLCSKRLLQEAYAL 562
Query: 370 VGRMKDDECEPNVQTYNILIRYFCDAGEIERGLELFEKMGS 410
+ +MK+D PN TYN LIR G+ EL +M S
Sbjct: 563 LKKMKEDGPLPNSGTYNTLIRAHLRDGDKAASAELIREMRS 603
Score = 130 bits (327), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 78/272 (28%), Positives = 135/272 (49%), Gaps = 3/272 (1%)
Query: 105 SFDHAIDLAARLRDYRTVWTLVHRMKSLSLGPTQKTFAIIAERYVSAGKADRAVKIFLSM 164
+F+ ID + + L M S+ P T+ + + + D+A ++F M
Sbjct: 332 TFNALIDAFVKEGKFVEAEKLYDDMIKRSIDPDIFTYNSLVNGFCMHDRLDKAKQMFEFM 391
Query: 165 HEHGCRQSLNSFNTILDLLCKEKKVEKAYNLFKVF--RGKFKADVISYNVIANGWCLVKR 222
C + ++NT++ CK K+VE LF+ RG D ++Y + G
Sbjct: 392 VSKDCFPDVVTYNTLIKGFCKSKRVEDGTELFREMSHRG-LVGDTVTYTTLIQGLFHDGD 450
Query: 223 TNKALEVLKEMVDRGLNPNLTTYNIVLKGYFRAGQIEEAWRFFLEMKKRKCEIDVVTYTT 282
+ A +V K+MV G+ P++ TY+I+L G G++E+A F M+K + ++D+ YTT
Sbjct: 451 CDNAQKVFKQMVSDGVPPDIMTYSILLDGLCNNGKLEKALEVFDYMQKSEIKLDIYIYTT 510
Query: 283 IVHGFGVVGEIKRARNVFDGMVNGGVLPSVATYNAMIQVLCKKDSVENAILVFEEMVGKG 342
++ G G++ ++F + GV P+V TYN MI LC K ++ A + ++M G
Sbjct: 511 MIEGMCKAGKVDDGWDLFCSLSLKGVKPNVVTYNTMISGLCSKRLLQEAYALLKKMKEDG 570
Query: 343 YMPNSTTYNVVIRGLCHTGEMERALEFVGRMK 374
+PNS TYN +IR G+ + E + M+
Sbjct: 571 PLPNSGTYNTLIRAHLRDGDKAASAELIREMR 602
Score = 113 bits (282), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 74/282 (26%), Positives = 140/282 (49%), Gaps = 4/282 (1%)
Query: 186 EKKVEKAYNLFK-VFRGKFKADVISYNVIANGWCLVKRTNKALEVLKEMVDRGLNPNLTT 244
+ K++ A LF + + + ++ +N + + +K+ + + + ++M + L T
Sbjct: 63 DMKLDDAIGLFGGMVKSRPLPSIVEFNKLLSAIAKMKKFDVVISLGEKMQRLEIVHGLYT 122
Query: 245 YNIVLKGYFRAGQIEEAWRFFLEMKKRKCEIDVVTYTTIVHGFGVVGEIKRARNVFDGMV 304
YNI++ + R QI A +M K E +VT +++++G+ I A + D MV
Sbjct: 123 YNILINCFCRRSQISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMV 182
Query: 305 NGGVLPSVATYNAMIQVLCKKDSVENAILVFEEMVGKGYMPNSTTYNVVIRGLCHTGEME 364
G P T+ +I L + A+ + + MV +G PN TY VV+ GLC G+ +
Sbjct: 183 EMGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDTD 242
Query: 365 RALEFVGRMKDDECEPNVQTYNILIRYFCDAGEIERGLELFEKMGSGVCLPNLDTYNILI 424
AL + +M+ + E +V +N +I C ++ L LF++M + PN+ TY+ LI
Sbjct: 243 LALNLLNKMEAAKIEADVVIFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLI 302
Query: 425 SSMFVRKKSDDLLVAGKLLIEMVDRGFMPRKFTFNRVLNGLL 466
S + + D A +LL +M+++ P TFN +++ +
Sbjct: 303 SCLCSYGRWSD---ASQLLSDMIEKKINPNLVTFNALIDAFV 341
Score = 64.3 bits (155), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 47/230 (20%), Positives = 100/230 (43%), Gaps = 3/230 (1%)
Query: 236 RGLNPNLTTYNIVLKGYFRAGQIEEAWRFFLEMKKRKCEIDVVTYTTIVHGFGVVGEIKR 295
R + Y +L+ ++++A F M K + +V + ++ + +
Sbjct: 44 RAFSSGSGDYREILRNGLHDMKLDDAIGLFGGMVKSRPLPSIVEFNKLLSAIAKMKKFDV 103
Query: 296 ARNVFDGMVNGGVLPSVATYNAMIQVLCKKDSVENAILVFEEMVGKGYMPNSTTYNVVIR 355
++ + M ++ + TYN +I C++ + A+ + +M+ GY P+ T + ++
Sbjct: 104 VISLGEKMQRLEIVHGLYTYNILINCFCRRSQISLALALLGKMMKLGYEPSIVTLSSLLN 163
Query: 356 GLCHTGEMERALEFVGRMKDDECEPNVQTYNILIRYFCDAGEIERGLELFEKMGSGVCLP 415
G CH + A+ V +M + P+ T+ LI + + L ++M C P
Sbjct: 164 GYCHGKRISDAVALVDQMVEMGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQP 223
Query: 416 NLDTYNILISSMFVRKKSDDLLVAGKLLIEMVDRGFMPRKFTFNRVLNGL 465
NL TY ++++ + R +D +A LL +M FN +++ L
Sbjct: 224 NLVTYGVVVNGLCKRGDTD---LALNLLNKMEAAKIEADVVIFNTIIDSL 270
Score = 45.1 bits (105), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 35/125 (28%), Positives = 59/125 (47%), Gaps = 3/125 (2%)
Query: 340 GKGYMPNSTTYNVVIRGLCHTGEMERALEFVGRMKDDECEPNVQTYNILIRYFCDAGEIE 399
G+ + S Y ++R H +++ A+ G M P++ +N L+ + +
Sbjct: 43 GRAFSSGSGDYREILRNGLHDMKLDDAIGLFGGMVKSRPLPSIVEFNKLLSAIAKMKKFD 102
Query: 400 RGLELFEKMGSGVCLPNLDTYNILISSMFVRKKSDDLLVAGKLLIEMVDRGFMPRKFTFN 459
+ L EKM + L TYNILI+ F R+ L +A LL +M+ G+ P T +
Sbjct: 103 VVISLGEKMQRLEIVHGLYTYNILINC-FCRRSQISLALA--LLGKMMKLGYEPSIVTLS 159
Query: 460 RVLNG 464
+LNG
Sbjct: 160 SLLNG 164
>sp|Q9LQ16|PPR94_ARATH Pentatricopeptide repeat-containing protein At1g62910
OS=Arabidopsis thaliana GN=At1g62910 PE=2 SV=1
Length = 632
Score = 191 bits (486), Expect = 9e-48, Method: Compositional matrix adjust.
Identities = 120/433 (27%), Positives = 207/433 (47%), Gaps = 74/433 (17%)
Query: 124 TLVHRMKSLSLGPTQKTFAIIAERYVSAGKADRAVKIFLSMHEHGCRQSLNSFNTILDLL 183
LV +M + P TF + KA AV + M + GC+ L ++ T+++ L
Sbjct: 174 ALVDQMVEMGYKPDTFTFTTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYGTVVNGL 233
Query: 184 CKEKKVEKAYNLFKVF-RGKFKADVISYNVIANGWCLVKRTNKALE-------------- 228
CK ++ A +L K +GK +ADV+ YN I +G C K + AL
Sbjct: 234 CKRGDIDLALSLLKKMEKGKIEADVVIYNTIIDGLCKYKHMDDALNLFTEMDNKGIRPDV 293
Query: 229 ---------------------VLKEMVDRGLNPNLTTYNIVLKGYFRAGQIEEAWRFFLE 267
+L +M++R +NPN+ T++ ++ + + G++ EA + + E
Sbjct: 294 FTYSSLISCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDE 353
Query: 268 MKKRKCEIDVVTYTTIVHGFGVVGEIKRARNVFDGMVNGGVLPSVATYNAMIQVLCKKDS 327
M KR + D+ TY+++++GF + + A+++F+ M++ P+V TY+ +I+ CK
Sbjct: 354 MIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYSTLIKGFCKAKR 413
Query: 328 VE-----------------------------------NAILVFEEMVGKGYMPNSTTYNV 352
VE NA +VF++MV G PN TYN+
Sbjct: 414 VEEGMELFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSVGVHPNILTYNI 473
Query: 353 VIRGLCHTGEMERALEFVGRMKDDECEPNVQTYNILIRYFCDAGEIERGLELFEKMGSGV 412
++ GLC G++ +A+ ++ EP++ TYNI+I C AG++E G ELF +
Sbjct: 474 LLDGLCKNGKLAKAMVVFEYLQRSTMEPDIYTYNIMIEGMCKAGKVEDGWELFCNLSLKG 533
Query: 413 CLPNLDTYNILISSMFVRKKSDDLLVAGKLLIEMVDRGFMPRKFTFNRVLNGLLLIGNQG 472
PN+ YN +IS F RK S + A LL +M + G +P T+N ++ L G++
Sbjct: 534 VSPNVIAYNTMISG-FCRKGSKE--EADSLLKKMKEDGPLPNSGTYNTLIRARLRDGDRE 590
Query: 473 LAKEILRLQSRCG 485
+ E+++ CG
Sbjct: 591 ASAELIKEMRSCG 603
Score = 176 bits (445), Expect = 4e-43, Method: Compositional matrix adjust.
Identities = 106/361 (29%), Positives = 180/361 (49%), Gaps = 4/361 (1%)
Query: 106 FDHAIDLAARLRDYRTVWTLVHRMKSLSLGPTQKTFAIIAERYVSAGKADRAVKIFLSMH 165
++ ID + + L M + + P T++ + + G+ A ++ M
Sbjct: 261 YNTIIDGLCKYKHMDDALNLFTEMDNKGIRPDVFTYSSLISCLCNYGRWSDASRLLSDMI 320
Query: 166 EHGCRQSLNSFNTILDLLCKEKKVEKAYNLF-KVFRGKFKADVISYNVIANGWCLVKRTN 224
E ++ +F+ ++D KE K+ +A L+ ++ + D+ +Y+ + NG+C+ R +
Sbjct: 321 ERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLD 380
Query: 225 KALEVLKEMVDRGLNPNLTTYNIVLKGYFRAGQIEEAWRFFLEMKKRKCEIDVVTYTTIV 284
+A + + M+ + PN+ TY+ ++KG+ +A ++EE F EM +R + VTYTT++
Sbjct: 381 EAKHMFELMISKDCFPNVVTYSTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYTTLI 440
Query: 285 HGFGVVGEIKRARNVFDGMVNGGVLPSVATYNAMIQVLCKKDSVENAILVFEEMVGKGYM 344
HGF + A+ VF MV+ GV P++ TYN ++ LCK + A++VFE +
Sbjct: 441 HGFFQARDCDNAQMVFKQMVSVGVHPNILTYNILLDGLCKNGKLAKAMVVFEYLQRSTME 500
Query: 345 PNSTTYNVVIRGLCHTGEMERALEFVGRMKDDECEPNVQTYNILIRYFCDAGEIERGLEL 404
P+ TYN++I G+C G++E E + PNV YN +I FC G E L
Sbjct: 501 PDIYTYNIMIEGMCKAGKVEDGWELFCNLSLKGVSPNVIAYNTMISGFCRKGSKEEADSL 560
Query: 405 FEKMGSGVCLPNLDTYNILISSMFVRKKSDDLLVAGKLLIEMVDRGFMPRKFTFNRVLNG 464
+KM LPN TYN LI + R + D + +L+ EM GF T V N
Sbjct: 561 LKKMKEDGPLPNSGTYNTLIRA---RLRDGDREASAELIKEMRSCGFAGDASTIGLVTNM 617
Query: 465 L 465
L
Sbjct: 618 L 618
Score = 141 bits (355), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 97/380 (25%), Positives = 181/380 (47%), Gaps = 17/380 (4%)
Query: 107 DHAIDLAARLRDYRTVWTLVHRMKSLSLGPTQKTFAIIAERYVSAGKADRAVKIFLSMHE 166
D A+DL + R ++V K LS F ++ +S G+ M
Sbjct: 65 DDAVDLFGDMVKSRPFPSIVEFNKLLSAVAKMNKFELV----ISLGE---------QMQT 111
Query: 167 HGCRQSLNSFNTILDLLCKEKKVEKAYN-LFKVFRGKFKADVISYNVIANGWCLVKRTNK 225
G L +++ ++ C+ ++ A L K+ + ++ D+++ + + NG+C KR +
Sbjct: 112 LGISHDLYTYSIFINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLSSLLNGYCHSKRISD 171
Query: 226 ALEVLKEMVDRGLNPNLTTYNIVLKGYFRAGQIEEAWRFFLEMKKRKCEIDVVTYTTIVH 285
A+ ++ +MV+ G P+ T+ ++ G F + EA +M +R C+ D+VTY T+V+
Sbjct: 172 AVALVDQMVEMGYKPDTFTFTTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYGTVVN 231
Query: 286 GFGVVGEIKRARNVFDGMVNGGVLPSVATYNAMIQVLCKKDSVENAILVFEEMVGKGYMP 345
G G+I A ++ M G + V YN +I LCK +++A+ +F EM KG P
Sbjct: 232 GLCKRGDIDLALSLLKKMEKGKIEADVVIYNTIIDGLCKYKHMDDALNLFTEMDNKGIRP 291
Query: 346 NSTTYNVVIRGLCHTGEMERALEFVGRMKDDECEPNVQTYNILIRYFCDAGEIERGLELF 405
+ TY+ +I LC+ G A + M + + PNV T++ LI F G++ +L+
Sbjct: 292 DVFTYSSLISCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLY 351
Query: 406 EKMGSGVCLPNLDTYNILISSMFVRKKSDDLLVAGKLLIEMVDRGFMPRKFTFNRVLNGL 465
++M P++ TY+ LI+ + + D+ A + M+ + P T++ ++ G
Sbjct: 352 DEMIKRSIDPDIFTYSSLINGFCMHDRLDE---AKHMFELMISKDCFPNVVTYSTLIKGF 408
Query: 466 LLIGNQGLAKEILRLQSRCG 485
E+ R S+ G
Sbjct: 409 CKAKRVEEGMELFREMSQRG 428
Score = 134 bits (336), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 96/339 (28%), Positives = 159/339 (46%), Gaps = 4/339 (1%)
Query: 143 IIAERYVSAGKADRAVKIFLSMHEHGCRQSLNSFNTILDLLCKEKKVEKAYNLFKVFRG- 201
I+ R K D AV +F M + S+ FN +L + K K E +L + +
Sbjct: 53 ILRNRLSDIIKVDDAVDLFGDMVKSRPFPSIVEFNKLLSAVAKMNKFELVISLGEQMQTL 112
Query: 202 KFKADVISYNVIANGWCLVKRTNKALEVLKEMVDRGLNPNLTTYNIVLKGYFRAGQIEEA 261
D+ +Y++ N +C + + AL VL +M+ G P++ T + +L GY + +I +A
Sbjct: 113 GISHDLYTYSIFINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLSSLLNGYCHSKRISDA 172
Query: 262 WRFFLEMKKRKCEIDVVTYTTIVHGFGVVGEIKRARNVFDGMVNGGVLPSVATYNAMIQV 321
+M + + D T+TT++HG + + A + D MV G P + TY ++
Sbjct: 173 VALVDQMVEMGYKPDTFTFTTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYGTVVNG 232
Query: 322 LCKKDSVENAILVFEEMVGKGYMPNSTTYNVVIRGLCHTGEMERALEFVGRMKDDECEPN 381
LCK+ ++ A+ + ++M + YN +I GLC M+ AL M + P+
Sbjct: 233 LCKRGDIDLALSLLKKMEKGKIEADVVIYNTIIDGLCKYKHMDDALNLFTEMDNKGIRPD 292
Query: 382 VQTYNILIRYFCDAGEIERGLELFEKMGSGVCLPNLDTYNILISSMFVRKKSDDLLVAGK 441
V TY+ LI C+ G L M PN+ T++ LI + FV K L+ A K
Sbjct: 293 VFTYSSLISCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDA-FV--KEGKLVEAEK 349
Query: 442 LLIEMVDRGFMPRKFTFNRVLNGLLLIGNQGLAKEILRL 480
L EM+ R P FT++ ++NG + AK + L
Sbjct: 350 LYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFEL 388
>sp|Q9ASZ8|PPR37_ARATH Pentatricopeptide repeat-containing protein At1g12620
OS=Arabidopsis thaliana GN=At1g12620 PE=2 SV=1
Length = 621
Score = 189 bits (479), Expect = 5e-47, Method: Compositional matrix adjust.
Identities = 105/365 (28%), Positives = 189/365 (51%), Gaps = 4/365 (1%)
Query: 125 LVHRMKSLSLGPTQKTFAIIAERYVSAGKADRAVKIFLSMHEHGCRQSLNSFNTILDLLC 184
L+ RM P + T+ + + +G+ A+++ M E + ++ I+D LC
Sbjct: 199 LIDRMVETGFQPNEVTYGPVLKVMCKSGQTALAMELLRKMEERKIKLDAVKYSIIIDGLC 258
Query: 185 KEKKVEKAYNLFKVFRGK-FKADVISYNVIANGWCLVKRTNKALEVLKEMVDRGLNPNLT 243
K+ ++ A+NLF K FKAD+I Y + G+C R + ++L++M+ R + P++
Sbjct: 259 KDGSLDNAFNLFNEMEIKGFKADIIIYTTLIRGFCYAGRWDDGAKLLRDMIKRKITPDVV 318
Query: 244 TYNIVLKGYFRAGQIEEAWRFFLEMKKRKCEIDVVTYTTIVHGFGVVGEIKRARNVFDGM 303
++ ++ + + G++ EA EM +R D VTYT+++ GF ++ +A ++ D M
Sbjct: 319 AFSALIDCFVKEGKLREAEELHKEMIQRGISPDTVTYTSLIDGFCKENQLDKANHMLDLM 378
Query: 304 VNGGVLPSVATYNAMIQVLCKKDSVENAILVFEEMVGKGYMPNSTTYNVVIRGLCHTGEM 363
V+ G P++ T+N +I CK + +++ + +F +M +G + ++ TYN +I+G C G++
Sbjct: 379 VSKGCGPNIRTFNILINGYCKANLIDDGLELFRKMSLRGVVADTVTYNTLIQGFCELGKL 438
Query: 364 ERALEFVGRMKDDECEPNVQTYNILIRYFCDAGEIERGLELFEKMGSGVCLPNLDTYNIL 423
E A E M P++ +Y IL+ CD GE E+ LE+FEK+ ++ YNI+
Sbjct: 439 EVAKELFQEMVSRRVRPDIVSYKILLDGLCDNGEPEKALEIFEKIEKSKMELDIGIYNII 498
Query: 424 ISSMFVRKKSDDLLVAGKLLIEMVDRGFMPRKFTFNRVLNGLLLIGNQGLAKEILRLQSR 483
I M K DD A L + +G P T+N ++ GL G+ A + R
Sbjct: 499 IHGMCNASKVDD---AWDLFCSLPLKGVKPDVKTYNIMIGGLCKKGSLSEADLLFRKMEE 555
Query: 484 CGRLP 488
G P
Sbjct: 556 DGHSP 560
Score = 151 bits (381), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 94/320 (29%), Positives = 161/320 (50%), Gaps = 6/320 (1%)
Query: 148 YVSAGKADRAVKIFLSMHEHGCRQSLNSFNTILDLLCKEKKVEKAYNLFK--VFRGKFKA 205
+ AG+ D K+ M + + +F+ ++D KE K+ +A L K + RG
Sbjct: 292 FCYAGRWDDGAKLLRDMIKRKITPDVVAFSALIDCFVKEGKLREAEELHKEMIQRG-ISP 350
Query: 206 DVISYNVIANGWCLVKRTNKALEVLKEMVDRGLNPNLTTYNIVLKGYFRAGQIEEAWRFF 265
D ++Y + +G+C + +KA +L MV +G PN+ T+NI++ GY +A I++ F
Sbjct: 351 DTVTYTSLIDGFCKENQLDKANHMLDLMVSKGCGPNIRTFNILINGYCKANLIDDGLELF 410
Query: 266 LEMKKRKCEIDVVTYTTIVHGFGVVGEIKRARNVFDGMVNGGVLPSVATYNAMIQVLCKK 325
+M R D VTY T++ GF +G+++ A+ +F MV+ V P + +Y ++ LC
Sbjct: 411 RKMSLRGVVADTVTYNTLIQGFCELGKLEVAKELFQEMVSRRVRPDIVSYKILLDGLCDN 470
Query: 326 DSVENAILVFEEMVGKGYMPNSTTYNVVIRGLCHTGEMERALEFVGRMKDDECEPNVQTY 385
E A+ +FE++ + YN++I G+C+ +++ A + + +P+V+TY
Sbjct: 471 GEPEKALEIFEKIEKSKMELDIGIYNIIIHGMCNASKVDDAWDLFCSLPLKGVKPDVKTY 530
Query: 386 NILIRYFCDAGEIERGLELFEKMGSGVCLPNLDTYNILISSMFVRKKSDDLLVAGKLLIE 445
NI+I C G + LF KM PN TYNILI + D + KL+ E
Sbjct: 531 NIMIGGLCKKGSLSEADLLFRKMEEDGHSPNGCTYNILIRAHL---GEGDATKSAKLIEE 587
Query: 446 MVDRGFMPRKFTFNRVLNGL 465
+ GF T V++ L
Sbjct: 588 IKRCGFSVDASTVKMVVDML 607
Score = 140 bits (354), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 82/293 (27%), Positives = 143/293 (48%), Gaps = 3/293 (1%)
Query: 105 SFDHAIDLAARLRDYRTVWTLVHRMKSLSLGPTQKTFAIIAERYVSAGKADRAVKIFLSM 164
+F ID + R L M + P T+ + + + + D+A + M
Sbjct: 319 AFSALIDCFVKEGKLREAEELHKEMIQRGISPDTVTYTSLIDGFCKENQLDKANHMLDLM 378
Query: 165 HEHGCRQSLNSFNTILDLLCKEKKVEKAYNLFK--VFRGKFKADVISYNVIANGWCLVKR 222
GC ++ +FN +++ CK ++ LF+ RG AD ++YN + G+C + +
Sbjct: 379 VSKGCGPNIRTFNILINGYCKANLIDDGLELFRKMSLRGVV-ADTVTYNTLIQGFCELGK 437
Query: 223 TNKALEVLKEMVDRGLNPNLTTYNIVLKGYFRAGQIEEAWRFFLEMKKRKCEIDVVTYTT 282
A E+ +EMV R + P++ +Y I+L G G+ E+A F +++K K E+D+ Y
Sbjct: 438 LEVAKELFQEMVSRRVRPDIVSYKILLDGLCDNGEPEKALEIFEKIEKSKMELDIGIYNI 497
Query: 283 IVHGFGVVGEIKRARNVFDGMVNGGVLPSVATYNAMIQVLCKKDSVENAILVFEEMVGKG 342
I+HG ++ A ++F + GV P V TYN MI LCKK S+ A L+F +M G
Sbjct: 498 IIHGMCNASKVDDAWDLFCSLPLKGVKPDVKTYNIMIGGLCKKGSLSEADLLFRKMEEDG 557
Query: 343 YMPNSTTYNVVIRGLCHTGEMERALEFVGRMKDDECEPNVQTYNILIRYFCDA 395
+ PN TYN++IR G+ ++ + + +K + T +++ D
Sbjct: 558 HSPNGCTYNILIRAHLGEGDATKSAKLIEEIKRCGFSVDASTVKMVVDMLSDG 610
Score = 140 bits (352), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 78/285 (27%), Positives = 147/285 (51%), Gaps = 1/285 (0%)
Query: 125 LVHRMKSLSLGPTQKTFAIIAERYVSAGKADRAVKIFLSMHEHGCRQSLNSFNTILDLLC 184
L+ M + P F+ + + +V GK A ++ M + G ++ +++D C
Sbjct: 304 LLRDMIKRKITPDVVAFSALIDCFVKEGKLREAEELHKEMIQRGISPDTVTYTSLIDGFC 363
Query: 185 KEKKVEKAYNLFKVFRGK-FKADVISYNVIANGWCLVKRTNKALEVLKEMVDRGLNPNLT 243
KE +++KA ++ + K ++ ++N++ NG+C + LE+ ++M RG+ +
Sbjct: 364 KENQLDKANHMLDLMVSKGCGPNIRTFNILINGYCKANLIDDGLELFRKMSLRGVVADTV 423
Query: 244 TYNIVLKGYFRAGQIEEAWRFFLEMKKRKCEIDVVTYTTIVHGFGVVGEIKRARNVFDGM 303
TYN +++G+ G++E A F EM R+ D+V+Y ++ G GE ++A +F+ +
Sbjct: 424 TYNTLIQGFCELGKLEVAKELFQEMVSRRVRPDIVSYKILLDGLCDNGEPEKALEIFEKI 483
Query: 304 VNGGVLPSVATYNAMIQVLCKKDSVENAILVFEEMVGKGYMPNSTTYNVVIRGLCHTGEM 363
+ + YN +I +C V++A +F + KG P+ TYN++I GLC G +
Sbjct: 484 EKSKMELDIGIYNIIIHGMCNASKVDDAWDLFCSLPLKGVKPDVKTYNIMIGGLCKKGSL 543
Query: 364 ERALEFVGRMKDDECEPNVQTYNILIRYFCDAGEIERGLELFEKM 408
A +M++D PN TYNILIR G+ + +L E++
Sbjct: 544 SEADLLFRKMEEDGHSPNGCTYNILIRAHLGEGDATKSAKLIEEI 588
Score = 138 bits (347), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 96/376 (25%), Positives = 170/376 (45%), Gaps = 4/376 (1%)
Query: 105 SFDHAIDLAARLRDYRTVWTLVHRMKSLSLGPTQKTFAIIAERYVSAGKADRAVKIFLSM 164
F + AR + Y V L +M+ + T +I+ K A +
Sbjct: 74 DFSRLFSVVARTKQYDLVLDLCKQMELKGIAHNLYTLSIMINCCCRCRKLSLAFSAMGKI 133
Query: 165 HEHGCRQSLNSFNTILDLLCKEKKVEKAYNLF-KVFRGKFKADVISYNVIANGWCLVKRT 223
+ G +F+T+++ LC E +V +A L ++ K +I+ N + NG CL +
Sbjct: 134 IKLGYEPDTVTFSTLINGLCLEGRVSEALELVDRMVEMGHKPTLITLNALVNGLCLNGKV 193
Query: 224 NKALEVLKEMVDRGLNPNLTTYNIVLKGYFRAGQIEEAWRFFLEMKKRKCEIDVVTYTTI 283
+ A+ ++ MV+ G PN TY VLK ++GQ A +M++RK ++D V Y+ I
Sbjct: 194 SDAVLLIDRMVETGFQPNEVTYGPVLKVMCKSGQTALAMELLRKMEERKIKLDAVKYSII 253
Query: 284 VHGFGVVGEIKRARNVFDGMVNGGVLPSVATYNAMIQVLCKKDSVENAILVFEEMVGKGY 343
+ G G + A N+F+ M G + Y +I+ C ++ + +M+ +
Sbjct: 254 IDGLCKDGSLDNAFNLFNEMEIKGFKADIIIYTTLIRGFCYAGRWDDGAKLLRDMIKRKI 313
Query: 344 MPNSTTYNVVIRGLCHTGEMERALEFVGRMKDDECEPNVQTYNILIRYFCDAGEIERGLE 403
P+ ++ +I G++ A E M P+ TY LI FC ++++
Sbjct: 314 TPDVVAFSALIDCFVKEGKLREAEELHKEMIQRGISPDTVTYTSLIDGFCKENQLDKANH 373
Query: 404 LFEKMGSGVCLPNLDTYNILISSMFVRKKSDDLLVAGKLLIEMVDRGFMPRKFTFNRVLN 463
+ + M S C PN+ T+NILI+ DD L +L +M RG + T+N ++
Sbjct: 374 MLDLMVSKGCGPNIRTFNILINGYCKANLIDDGL---ELFRKMSLRGVVADTVTYNTLIQ 430
Query: 464 GLLLIGNQGLAKEILR 479
G +G +AKE+ +
Sbjct: 431 GFCELGKLEVAKELFQ 446
Score = 112 bits (281), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 75/291 (25%), Positives = 148/291 (50%), Gaps = 4/291 (1%)
Query: 188 KVEKAYNLFK-VFRGKFKADVISYNVIANGWCLVKRTNKALEVLKEMVDRGLNPNLTTYN 246
K + A +LF+ + R + + +I ++ + + K+ + L++ K+M +G+ NL T +
Sbjct: 52 KEDDAVDLFQEMTRSRPRPRLIDFSRLFSVVARTKQYDLVLDLCKQMELKGIAHNLYTLS 111
Query: 247 IVLKGYFRAGQIEEAWRFFLEMKKRKCEIDVVTYTTIVHGFGVVGEIKRARNVFDGMVNG 306
I++ R ++ A+ ++ K E D VT++T+++G + G + A + D MV
Sbjct: 112 IMINCCCRCRKLSLAFSAMGKIIKLGYEPDTVTFSTLINGLCLEGRVSEALELVDRMVEM 171
Query: 307 GVLPSVATYNAMIQVLCKKDSVENAILVFEEMVGKGYMPNSTTYNVVIRGLCHTGEMERA 366
G P++ T NA++ LC V +A+L+ + MV G+ PN TY V++ +C +G+ A
Sbjct: 172 GHKPTLITLNALVNGLCLNGKVSDAVLLIDRMVETGFQPNEVTYGPVLKVMCKSGQTALA 231
Query: 367 LEFVGRMKDDECEPNVQTYNILIRYFCDAGEIERGLELFEKMGSGVCLPNLDTYNILISS 426
+E + +M++ + + + Y+I+I C G ++ LF +M ++ Y LI
Sbjct: 232 MELLRKMEERKIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEIKGFKADIIIYTTLIRG 291
Query: 427 MFVRKKSDDLLVAGKLLIEMVDRGFMPRKFTFNRVLNGLLLIGNQGLAKEI 477
+ DD KLL +M+ R P F+ +++ + G A+E+
Sbjct: 292 FCYAGRWDD---GAKLLRDMIKRKITPDVVAFSALIDCFVKEGKLREAEEL 339
>sp|Q0WKV3|PPR36_ARATH Pentatricopeptide repeat-containing protein At1g12300,
mitochondrial OS=Arabidopsis thaliana GN=At1g12300 PE=2
SV=1
Length = 637
Score = 189 bits (479), Expect = 6e-47, Method: Compositional matrix adjust.
Identities = 104/365 (28%), Positives = 186/365 (50%), Gaps = 4/365 (1%)
Query: 125 LVHRMKSLSLGPTQKTFAIIAERYVSAGKADRAVKIFLSMHEHGCRQSLNSFNTILDLLC 184
L+ +M P T+ + +G+ A+++ M E + ++ I+D LC
Sbjct: 215 LIDKMVEYGCQPNAVTYGPVLNVMCKSGQTALAMELLRKMEERNIKLDAVKYSIIIDGLC 274
Query: 185 KEKKVEKAYNLFKVFRGK-FKADVISYNVIANGWCLVKRTNKALEVLKEMVDRGLNPNLT 243
K ++ A+NLF K ++I+YN++ G+C R + ++L++M+ R +NPN+
Sbjct: 275 KHGSLDNAFNLFNEMEMKGITTNIITYNILIGGFCNAGRWDDGAKLLRDMIKRKINPNVV 334
Query: 244 TYNIVLKGYFRAGQIEEAWRFFLEMKKRKCEIDVVTYTTIVHGFGVVGEIKRARNVFDGM 303
T+++++ + + G++ EA EM R D +TYT+++ GF + +A + D M
Sbjct: 335 TFSVLIDSFVKEGKLREAEELHKEMIHRGIAPDTITYTSLIDGFCKENHLDKANQMVDLM 394
Query: 304 VNGGVLPSVATYNAMIQVLCKKDSVENAILVFEEMVGKGYMPNSTTYNVVIRGLCHTGEM 363
V+ G P++ T+N +I CK + +++ + +F +M +G + ++ TYN +I+G C G++
Sbjct: 395 VSKGCDPNIRTFNILINGYCKANRIDDGLELFRKMSLRGVVADTVTYNTLIQGFCELGKL 454
Query: 364 ERALEFVGRMKDDECEPNVQTYNILIRYFCDAGEIERGLELFEKMGSGVCLPNLDTYNIL 423
A E M + PN+ TY IL+ CD GE E+ LE+FEK+ ++ YNI+
Sbjct: 455 NVAKELFQEMVSRKVPPNIVTYKILLDGLCDNGESEKALEIFEKIEKSKMELDIGIYNII 514
Query: 424 ISSMFVRKKSDDLLVAGKLLIEMVDRGFMPRKFTFNRVLNGLLLIGNQGLAKEILRLQSR 483
I M K DD A L + +G P T+N ++ GL G A+ + R
Sbjct: 515 IHGMCNASKVDD---AWDLFCSLPLKGVKPGVKTYNIMIGGLCKKGPLSEAELLFRKMEE 571
Query: 484 CGRLP 488
G P
Sbjct: 572 DGHAP 576
Score = 162 bits (411), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 105/381 (27%), Positives = 185/381 (48%), Gaps = 4/381 (1%)
Query: 100 AHSPSSFDHAIDLAARLRDYRTVWTLVHRMKSLSLGPTQKTFAIIAERYVSAGKADRAVK 159
AH+ + I+ R R ++ + ++ L P TF+ + G+ A++
Sbjct: 120 AHNLYTLSIMINCFCRCRKLCLAFSAMGKIIKLGYEPNTITFSTLINGLCLEGRVSEALE 179
Query: 160 IFLSMHEHGCRQSLNSFNTILDLLCKEKKVEKAYNLF-KVFRGKFKADVISYNVIANGWC 218
+ M E G + L + NT+++ LC K +A L K+ + + ++Y + N C
Sbjct: 180 LVDRMVEMGHKPDLITINTLVNGLCLSGKEAEAMLLIDKMVEYGCQPNAVTYGPVLNVMC 239
Query: 219 LVKRTNKALEVLKEMVDRGLNPNLTTYNIVLKGYFRAGQIEEAWRFFLEMKKRKCEIDVV 278
+T A+E+L++M +R + + Y+I++ G + G ++ A+ F EM+ + +++
Sbjct: 240 KSGQTALAMELLRKMEERNIKLDAVKYSIIIDGLCKHGSLDNAFNLFNEMEMKGITTNII 299
Query: 279 TYTTIVHGFGVVGEIKRARNVFDGMVNGGVLPSVATYNAMIQVLCKKDSVENAILVFEEM 338
TY ++ GF G + M+ + P+V T++ +I K+ + A + +EM
Sbjct: 300 TYNILIGGFCNAGRWDDGAKLLRDMIKRKINPNVVTFSVLIDSFVKEGKLREAEELHKEM 359
Query: 339 VGKGYMPNSTTYNVVIRGLCHTGEMERALEFVGRMKDDECEPNVQTYNILIRYFCDAGEI 398
+ +G P++ TY +I G C +++A + V M C+PN++T+NILI +C A I
Sbjct: 360 IHRGIAPDTITYTSLIDGFCKENHLDKANQMVDLMVSKGCDPNIRTFNILINGYCKANRI 419
Query: 399 ERGLELFEKMGSGVCLPNLDTYNILISSMFVRKKSDDLLVAGKLLIEMVDRGFMPRKFTF 458
+ GLELF KM + + TYN LI K L VA +L EMV R P T+
Sbjct: 420 DDGLELFRKMSLRGVVADTVTYNTLIQGFCELGK---LNVAKELFQEMVSRKVPPNIVTY 476
Query: 459 NRVLNGLLLIGNQGLAKEILR 479
+L+GL G A EI
Sbjct: 477 KILLDGLCDNGESEKALEIFE 497
Score = 156 bits (394), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 98/345 (28%), Positives = 174/345 (50%), Gaps = 6/345 (1%)
Query: 123 WTLVHRMKSLSLGPTQKTFAIIAERYVSAGKADRAVKIFLSMHEHGCRQSLNSFNTILDL 182
+ L + M+ + T+ I+ + +AG+ D K+ M + ++ +F+ ++D
Sbjct: 283 FNLFNEMEMKGITTNIITYNILIGGFCNAGRWDDGAKLLRDMIKRKINPNVVTFSVLIDS 342
Query: 183 LCKEKKVEKAYNLFK--VFRGKFKADVISYNVIANGWCLVKRTNKALEVLKEMVDRGLNP 240
KE K+ +A L K + RG D I+Y + +G+C +KA +++ MV +G +P
Sbjct: 343 FVKEGKLREAEELHKEMIHRG-IAPDTITYTSLIDGFCKENHLDKANQMVDLMVSKGCDP 401
Query: 241 NLTTYNIVLKGYFRAGQIEEAWRFFLEMKKRKCEIDVVTYTTIVHGFGVVGEIKRARNVF 300
N+ T+NI++ GY +A +I++ F +M R D VTY T++ GF +G++ A+ +F
Sbjct: 402 NIRTFNILINGYCKANRIDDGLELFRKMSLRGVVADTVTYNTLIQGFCELGKLNVAKELF 461
Query: 301 DGMVNGGVLPSVATYNAMIQVLCKKDSVENAILVFEEMVGKGYMPNSTTYNVVIRGLCHT 360
MV+ V P++ TY ++ LC E A+ +FE++ + YN++I G+C+
Sbjct: 462 QEMVSRKVPPNIVTYKILLDGLCDNGESEKALEIFEKIEKSKMELDIGIYNIIIHGMCNA 521
Query: 361 GEMERALEFVGRMKDDECEPNVQTYNILIRYFCDAGEIERGLELFEKMGSGVCLPNLDTY 420
+++ A + + +P V+TYNI+I C G + LF KM P+ TY
Sbjct: 522 SKVDDAWDLFCSLPLKGVKPGVKTYNIMIGGLCKKGPLSEAELLFRKMEEDGHAPDGWTY 581
Query: 421 NILISSMFVRKKSDDLLVAGKLLIEMVDRGFMPRKFTFNRVLNGL 465
NILI + D + KL+ E+ GF T V++ L
Sbjct: 582 NILIRAHL---GDGDATKSVKLIEELKRCGFSVDASTIKMVIDML 623
Score = 144 bits (362), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 88/318 (27%), Positives = 151/318 (47%), Gaps = 7/318 (2%)
Query: 80 WNHALKALHFFNILSYHPTYAHSPSSFDHAIDLAARLRDYRTVWTLVHRMKSLSLGPTQK 139
W+ K L +P +F ID + R L M + P
Sbjct: 314 WDDGAKLLRDMIKRKINPNVV----TFSVLIDSFVKEGKLREAEELHKEMIHRGIAPDTI 369
Query: 140 TFAIIAERYVSAGKADRAVKIFLSMHEHGCRQSLNSFNTILDLLCKEKKVEKAYNLFK-- 197
T+ + + + D+A ++ M GC ++ +FN +++ CK +++ LF+
Sbjct: 370 TYTSLIDGFCKENHLDKANQMVDLMVSKGCDPNIRTFNILINGYCKANRIDDGLELFRKM 429
Query: 198 VFRGKFKADVISYNVIANGWCLVKRTNKALEVLKEMVDRGLNPNLTTYNIVLKGYFRAGQ 257
RG AD ++YN + G+C + + N A E+ +EMV R + PN+ TY I+L G G+
Sbjct: 430 SLRGVV-ADTVTYNTLIQGFCELGKLNVAKELFQEMVSRKVPPNIVTYKILLDGLCDNGE 488
Query: 258 IEEAWRFFLEMKKRKCEIDVVTYTTIVHGFGVVGEIKRARNVFDGMVNGGVLPSVATYNA 317
E+A F +++K K E+D+ Y I+HG ++ A ++F + GV P V TYN
Sbjct: 489 SEKALEIFEKIEKSKMELDIGIYNIIIHGMCNASKVDDAWDLFCSLPLKGVKPGVKTYNI 548
Query: 318 MIQVLCKKDSVENAILVFEEMVGKGYMPNSTTYNVVIRGLCHTGEMERALEFVGRMKDDE 377
MI LCKK + A L+F +M G+ P+ TYN++IR G+ ++++ + +K
Sbjct: 549 MIGGLCKKGPLSEAELLFRKMEEDGHAPDGWTYNILIRAHLGDGDATKSVKLIEELKRCG 608
Query: 378 CEPNVQTYNILIRYFCDA 395
+ T ++I D
Sbjct: 609 FSVDASTIKMVIDMLSDG 626
Score = 112 bits (281), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 76/291 (26%), Positives = 145/291 (49%), Gaps = 4/291 (1%)
Query: 188 KVEKAYNLFK-VFRGKFKADVISYNVIANGWCLVKRTNKALEVLKEMVDRGLNPNLTTYN 246
K + A +LF+ + + VI ++ + + K+ + L + K+M +G+ NL T +
Sbjct: 68 KADDAIDLFRDMIHSRPLPTVIDFSRLFSAIAKTKQYDLVLALCKQMELKGIAHNLYTLS 127
Query: 247 IVLKGYFRAGQIEEAWRFFLEMKKRKCEIDVVTYTTIVHGFGVVGEIKRARNVFDGMVNG 306
I++ + R ++ A+ ++ K E + +T++T+++G + G + A + D MV
Sbjct: 128 IMINCFCRCRKLCLAFSAMGKIIKLGYEPNTITFSTLINGLCLEGRVSEALELVDRMVEM 187
Query: 307 GVLPSVATYNAMIQVLCKKDSVENAILVFEEMVGKGYMPNSTTYNVVIRGLCHTGEMERA 366
G P + T N ++ LC A+L+ ++MV G PN+ TY V+ +C +G+ A
Sbjct: 188 GHKPDLITINTLVNGLCLSGKEAEAMLLIDKMVEYGCQPNAVTYGPVLNVMCKSGQTALA 247
Query: 367 LEFVGRMKDDECEPNVQTYNILIRYFCDAGEIERGLELFEKMGSGVCLPNLDTYNILISS 426
+E + +M++ + + Y+I+I C G ++ LF +M N+ TYNILI
Sbjct: 248 MELLRKMEERNIKLDAVKYSIIIDGLCKHGSLDNAFNLFNEMEMKGITTNIITYNILIGG 307
Query: 427 MFVRKKSDDLLVAGKLLIEMVDRGFMPRKFTFNRVLNGLLLIGNQGLAKEI 477
+ DD KLL +M+ R P TF+ +++ + G A+E+
Sbjct: 308 FCNAGRWDD---GAKLLRDMIKRKINPNVVTFSVLIDSFVKEGKLREAEEL 355
>sp|Q9C8T7|PP101_ARATH Pentatricopeptide repeat-containing protein At1g63330
OS=Arabidopsis thaliana GN=At1g63330 PE=2 SV=2
Length = 559
Score = 187 bits (474), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 101/343 (29%), Positives = 179/343 (52%), Gaps = 4/343 (1%)
Query: 124 TLVHRMKSLSLGPTQKTFAIIAERYVSAGKADRAVKIFLSMHEHGCRQSLNSFNTILDLL 183
LV RM P T+ ++ G D A + M + FNTI+D L
Sbjct: 136 ALVDRMVQRGCQPNLVTYGVVVNGLCKRGDIDLAFNLLNKMEAAKIEADVVIFNTIIDSL 195
Query: 184 CKEKKVEKAYNLFKVFRGK-FKADVISYNVIANGWCLVKRTNKALEVLKEMVDRGLNPNL 242
CK + V+ A NLFK K + +V++Y+ + + C R + A ++L +M+++ +NPNL
Sbjct: 196 CKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMIEKKINPNL 255
Query: 243 TTYNIVLKGYFRAGQIEEAWRFFLEMKKRKCEIDVVTYTTIVHGFGVVGEIKRARNVFDG 302
T+N ++ + + G+ EA + +M KR + D+ TY ++++GF + + +A+ +F+
Sbjct: 256 VTFNALIDAFVKEGKFVEAEKLHDDMIKRSIDPDIFTYNSLINGFCMHDRLDKAKQMFEF 315
Query: 303 MVNGGVLPSVATYNAMIQVLCKKDSVENAILVFEEMVGKGYMPNSTTYNVVIRGLCHTGE 362
MV+ P + TYN +I+ CK VE+ +F EM +G + ++ TY +I+GL H G+
Sbjct: 316 MVSKDCFPDLDTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQGLFHDGD 375
Query: 363 MERALEFVGRMKDDECEPNVQTYNILIRYFCDAGEIERGLELFEKMGSGVCLPNLDTYNI 422
+ A + +M D P++ TY+IL+ C+ G++E+ LE+F+ M ++ Y
Sbjct: 376 CDNAQKVFKQMVSDGVPPDIMTYSILLDGLCNNGKLEKALEVFDYMQKSEIKLDIYIYTT 435
Query: 423 LISSMFVRKKSDDLLVAGKLLIEMVDRGFMPRKFTFNRVLNGL 465
+I M K DD L + +G P T+N +++GL
Sbjct: 436 MIEGMCKAGKVDD---GWDLFCSLSLKGVKPNVVTYNTMISGL 475
Score = 166 bits (420), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 100/375 (26%), Positives = 184/375 (49%), Gaps = 4/375 (1%)
Query: 106 FDHAIDLAARLRDYRTVWTLVHRMKSLSLGPTQKTFAIIAERYVSAGKADRAVKIFLSMH 165
F+ + A+++ + V +L +M+ L + T+ I+ + + A+ + M
Sbjct: 13 FNKLLSAIAKMKKFDLVISLGEKMQRLGISHNLYTYNILINCFCRRSQISLALALLGKMM 72
Query: 166 EHGCRQSLNSFNTILDLLCKEKKVEKAYNLF-KVFRGKFKADVISYNVIANGWCLVKRTN 224
+ G S+ + +++L+ C K++ A L ++ ++ D I++ + +G L + +
Sbjct: 73 KLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTTLIHGLFLHNKAS 132
Query: 225 KALEVLKEMVDRGLNPNLTTYNIVLKGYFRAGQIEEAWRFFLEMKKRKCEIDVVTYTTIV 284
+A+ ++ MV RG PNL TY +V+ G + G I+ A+ +M+ K E DVV + TI+
Sbjct: 133 EAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDIDLAFNLLNKMEAAKIEADVVIFNTII 192
Query: 285 HGFGVVGEIKRARNVFDGMVNGGVLPSVATYNAMIQVLCKKDSVENAILVFEEMVGKGYM 344
+ A N+F M G+ P+V TY+++I LC +A + +M+ K
Sbjct: 193 DSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMIEKKIN 252
Query: 345 PNSTTYNVVIRGLCHTGEMERALEFVGRMKDDECEPNVQTYNILIRYFCDAGEIERGLEL 404
PN T+N +I G+ A + M +P++ TYN LI FC +++ ++
Sbjct: 253 PNLVTFNALIDAFVKEGKFVEAEKLHDDMIKRSIDPDIFTYNSLINGFCMHDRLDKAKQM 312
Query: 405 FEKMGSGVCLPNLDTYNILISSMFVRKKSDDLLVAGKLLIEMVDRGFMPRKFTFNRVLNG 464
FE M S C P+LDTYN LI K+ +D +L EM RG + T+ ++ G
Sbjct: 313 FEFMVSKDCFPDLDTYNTLIKGFCKSKRVED---GTELFREMSHRGLVGDTVTYTTLIQG 369
Query: 465 LLLIGNQGLAKEILR 479
L G+ A+++ +
Sbjct: 370 LFHDGDCDNAQKVFK 384
Score = 161 bits (407), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 102/361 (28%), Positives = 171/361 (47%), Gaps = 4/361 (1%)
Query: 106 FDHAIDLAARLRDYRTVWTLVHRMKSLSLGPTQKTFAIIAERYVSAGKADRAVKIFLSMH 165
F+ ID + R L M++ + P T++ + S G+ A ++ M
Sbjct: 188 FNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMI 247
Query: 166 EHGCRQSLNSFNTILDLLCKEKKVEKAYNLFK-VFRGKFKADVISYNVIANGWCLVKRTN 224
E +L +FN ++D KE K +A L + + D+ +YN + NG+C+ R +
Sbjct: 248 EKKINPNLVTFNALIDAFVKEGKFVEAEKLHDDMIKRSIDPDIFTYNSLINGFCMHDRLD 307
Query: 225 KALEVLKEMVDRGLNPNLTTYNIVLKGYFRAGQIEEAWRFFLEMKKRKCEIDVVTYTTIV 284
KA ++ + MV + P+L TYN ++KG+ ++ ++E+ F EM R D VTYTT++
Sbjct: 308 KAKQMFEFMVSKDCFPDLDTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTLI 367
Query: 285 HGFGVVGEIKRARNVFDGMVNGGVLPSVATYNAMIQVLCKKDSVENAILVFEEMVGKGYM 344
G G+ A+ VF MV+ GV P + TY+ ++ LC +E A+ VF+ M
Sbjct: 368 QGLFHDGDCDNAQKVFKQMVSDGVPPDIMTYSILLDGLCNNGKLEKALEVFDYMQKSEIK 427
Query: 345 PNSTTYNVVIRGLCHTGEMERALEFVGRMKDDECEPNVQTYNILIRYFCDAGEIERGLEL 404
+ Y +I G+C G+++ + + +PNV TYN +I C ++ L
Sbjct: 428 LDIYIYTTMIEGMCKAGKVDDGWDLFCSLSLKGVKPNVVTYNTMISGLCSKRLLQEAYAL 487
Query: 405 FEKMGSGVCLPNLDTYNILISSMFVRKKSDDLLVAGKLLIEMVDRGFMPRKFTFNRVLNG 464
+KM LP+ TYN LI + + D + +L+ EM F+ T V N
Sbjct: 488 LKKMKEDGPLPDSGTYNTLIRAHL---RDGDKAASAELIREMRSCRFVGDASTIGLVANM 544
Query: 465 L 465
L
Sbjct: 545 L 545
Score = 131 bits (329), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 78/272 (28%), Positives = 136/272 (50%), Gaps = 3/272 (1%)
Query: 105 SFDHAIDLAARLRDYRTVWTLVHRMKSLSLGPTQKTFAIIAERYVSAGKADRAVKIFLSM 164
+F+ ID + + L M S+ P T+ + + + D+A ++F M
Sbjct: 257 TFNALIDAFVKEGKFVEAEKLHDDMIKRSIDPDIFTYNSLINGFCMHDRLDKAKQMFEFM 316
Query: 165 HEHGCRQSLNSFNTILDLLCKEKKVEKAYNLFKVF--RGKFKADVISYNVIANGWCLVKR 222
C L+++NT++ CK K+VE LF+ RG D ++Y + G
Sbjct: 317 VSKDCFPDLDTYNTLIKGFCKSKRVEDGTELFREMSHRG-LVGDTVTYTTLIQGLFHDGD 375
Query: 223 TNKALEVLKEMVDRGLNPNLTTYNIVLKGYFRAGQIEEAWRFFLEMKKRKCEIDVVTYTT 282
+ A +V K+MV G+ P++ TY+I+L G G++E+A F M+K + ++D+ YTT
Sbjct: 376 CDNAQKVFKQMVSDGVPPDIMTYSILLDGLCNNGKLEKALEVFDYMQKSEIKLDIYIYTT 435
Query: 283 IVHGFGVVGEIKRARNVFDGMVNGGVLPSVATYNAMIQVLCKKDSVENAILVFEEMVGKG 342
++ G G++ ++F + GV P+V TYN MI LC K ++ A + ++M G
Sbjct: 436 MIEGMCKAGKVDDGWDLFCSLSLKGVKPNVVTYNTMISGLCSKRLLQEAYALLKKMKEDG 495
Query: 343 YMPNSTTYNVVIRGLCHTGEMERALEFVGRMK 374
+P+S TYN +IR G+ + E + M+
Sbjct: 496 PLPDSGTYNTLIRAHLRDGDKAASAELIREMR 527
Score = 118 bits (295), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 72/263 (27%), Positives = 133/263 (50%), Gaps = 3/263 (1%)
Query: 207 VISYNVIANGWCLVKRTNKALEVLKEMVDRGLNPNLTTYNIVLKGYFRAGQIEEAWRFFL 266
+ +N + + +K+ + + + ++M G++ NL TYNI++ + R QI A
Sbjct: 10 IFEFNKLLSAIAKMKKFDLVISLGEKMQRLGISHNLYTYNILINCFCRRSQISLALALLG 69
Query: 267 EMKKRKCEIDVVTYTTIVHGFGVVGEIKRARNVFDGMVNGGVLPSVATYNAMIQVLCKKD 326
+M K E +VT +++++G+ I A + D MV G P T+ +I L +
Sbjct: 70 KMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTTLIHGLFLHN 129
Query: 327 SVENAILVFEEMVGKGYMPNSTTYNVVIRGLCHTGEMERALEFVGRMKDDECEPNVQTYN 386
A+ + + MV +G PN TY VV+ GLC G+++ A + +M+ + E +V +N
Sbjct: 130 KASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDIDLAFNLLNKMEAAKIEADVVIFN 189
Query: 387 ILIRYFCDAGEIERGLELFEKMGSGVCLPNLDTYNILISSMFVRKKSDDLLVAGKLLIEM 446
+I C ++ L LF++M + PN+ TY+ LIS + + D A +LL +M
Sbjct: 190 TIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSD---ASQLLSDM 246
Query: 447 VDRGFMPRKFTFNRVLNGLLLIG 469
+++ P TFN +++ + G
Sbjct: 247 IEKKINPNLVTFNALIDAFVKEG 269
Score = 92.0 bits (227), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 56/239 (23%), Positives = 113/239 (47%), Gaps = 3/239 (1%)
Query: 240 PNLTTYNIVLKGYFRAGQIEEAWRFFLEMKKRKCEIDVVTYTTIVHGFGVVGEIKRARNV 299
P++ +N +L + + + +M++ ++ TY +++ F +I A +
Sbjct: 8 PSIFEFNKLLSAIAKMKKFDLVISLGEKMQRLGISHNLYTYNILINCFCRRSQISLALAL 67
Query: 300 FDGMVNGGVLPSVATYNAMIQVLCKKDSVENAILVFEEMVGKGYMPNSTTYNVVIRGLCH 359
M+ G PS+ T ++++ C + +A+ + ++MV GY P++ T+ +I GL
Sbjct: 68 LGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTTLIHGLFL 127
Query: 360 TGEMERALEFVGRMKDDECEPNVQTYNILIRYFCDAGEIERGLELFEKMGSGVCLPNLDT 419
+ A+ V RM C+PN+ TY +++ C G+I+ L KM + ++
Sbjct: 128 HNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDIDLAFNLLNKMEAAKIEADVVI 187
Query: 420 YNILISSMFVRKKSDDLLVAGKLLIEMVDRGFMPRKFTFNRVLNGLLLIGNQGLAKEIL 478
+N +I S+ + DD L L EM +G P T++ +++ L G A ++L
Sbjct: 188 FNTIIDSLCKYRHVDDAL---NLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLL 243
Score = 73.9 bits (180), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 51/176 (28%), Positives = 84/176 (47%), Gaps = 3/176 (1%)
Query: 303 MVNGGVLPSVATYNAMIQVLCKKDSVENAILVFEEMVGKGYMPNSTTYNVVIRGLCHTGE 362
MV LPS+ +N ++ + K + I + E+M G N TYN++I C +
Sbjct: 1 MVKSRPLPSIFEFNKLLSAIAKMKKFDLVISLGEKMQRLGISHNLYTYNILINCFCRRSQ 60
Query: 363 MERALEFVGRMKDDECEPNVQTYNILIRYFCDAGEIERGLELFEKMGSGVCLPNLDTYNI 422
+ AL +G+M EP++ T + L+ +C I + L ++M P+ T+
Sbjct: 61 ISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTT 120
Query: 423 LISSMFVRKKSDDLLVAGKLLIEMVDRGFMPRKFTFNRVLNGLLLIGNQGLAKEIL 478
LI +F+ K+ + A L+ MV RG P T+ V+NGL G+ LA +L
Sbjct: 121 LIHGLFLHNKASE---AVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDIDLAFNLL 173
>sp|Q9SSR6|PPR78_ARATH Pentatricopeptide repeat-containing protein At1g52640,
mitochondrial OS=Arabidopsis thaliana GN=At1g52640 PE=2
SV=1
Length = 523
Score = 186 bits (473), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 116/443 (26%), Positives = 210/443 (47%), Gaps = 5/443 (1%)
Query: 34 PPAAADPAALASLILTSTDPRT-LTQTLHCPSLHWTPQLVDQIIKRLWNHALKALHFFNI 92
PP+ ++ ++ +P+ L TL S + LV+Q++KR N A FF
Sbjct: 32 PPSPDLVNEISRVLSDHRNPKDDLEHTLVAYSPRVSSNLVEQVLKRCKNLGFPAHRFFLW 91
Query: 93 LSYHPTYAHSPSSFDHAIDLAARLRDYRTVWTLVHRMKSLS-LGPTQKTFAIIAERYVSA 151
P +AHS S+ +++ + + +W + + + + K F I+ Y A
Sbjct: 92 ARRIPDFAHSLESYHILVEILGSSKQFALLWDFLIEAREYNYFEISSKVFWIVFRAYSRA 151
Query: 152 GKADRAVKIFLSMHEHGCRQSLNSFNTILDLLCKEKKVEKAYNLFKVFRG-KFKADVISY 210
A + F M E G + ++ + +L LC +K V A F +G +Y
Sbjct: 152 NLPSEACRAFNRMVEFGIKPCVDDLDQLLHSLCDKKHVNHAQEFFGKAKGFGIVPSAKTY 211
Query: 211 NVIANGWCLVKRTNKALEVLKEMVDRGLNPNLTTYNIVLKGYFRAGQIEEAWRFFLEMKK 270
+++ GW ++ + A +V EM++R +L YN +L ++G ++ ++ F EM
Sbjct: 212 SILVRGWARIRDASGARKVFDEMLERNCVVDLLAYNALLDALCKSGDVDGGYKMFQEMGN 271
Query: 271 RKCEIDVVTYTTIVHGFGVVGEIKRARNVFDGMVNGGVLPSVATYNAMIQVLCKKDSVEN 330
+ D ++ +H + G++ A V D M ++P+V T+N +I+ LCK + V++
Sbjct: 272 LGLKPDAYSFAIFIHAYCDAGDVHSAYKVLDRMKRYDLVPNVYTFNHIIKTLCKNEKVDD 331
Query: 331 AILVFEEMVGKGYMPNSTTYNVVIRGLCHTGEMERALEFVGRMKDDECEPNVQTYNILIR 390
A L+ +EM+ KG P++ TYN ++ C E+ RA + + RM +C P+ TYN++++
Sbjct: 332 AYLLLDEMIQKGANPDTWTYNSIMAYHCDHCEVNRATKLLSRMDRTKCLPDRHTYNMVLK 391
Query: 391 YFCDAGEIERGLELFEKMGSGVCLPNLDTYNILISSMFVRKKSDDLLVAGKLLIEMVDRG 450
G +R E++E M P + TY ++I + VRKK L A + M+D G
Sbjct: 392 LLIRIGRFDRATEIWEGMSERKFYPTVATYTVMIHGL-VRKKG-KLEEACRYFEMMIDEG 449
Query: 451 FMPRKFTFNRVLNGLLLIGNQGL 473
P T + N L+ G +
Sbjct: 450 IPPYSTTVEMLRNRLVGWGQMDV 472
Score = 109 bits (272), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 75/284 (26%), Positives = 123/284 (43%), Gaps = 37/284 (13%)
Query: 128 RMKSLSLGPTQKTFAIIAERYVSAGKADRAVKIFLSMHEHGCRQSLNSFNTILDLLCKEK 187
+ K + P+ KT++I+ + A A K+F M E C L ++N +LD LCK
Sbjct: 198 KAKGFGIVPSAKTYSILVRGWARIRDASGARKVFDEMLERNCVVDLLAYNALLDALCKSG 257
Query: 188 KVEKAYNLFK---------------VF---------------------RGKFKADVISYN 211
V+ Y +F+ +F R +V ++N
Sbjct: 258 DVDGGYKMFQEMGNLGLKPDAYSFAIFIHAYCDAGDVHSAYKVLDRMKRYDLVPNVYTFN 317
Query: 212 VIANGWCLVKRTNKALEVLKEMVDRGLNPNLTTYNIVLKGYFRAGQIEEAWRFFLEMKKR 271
I C ++ + A +L EM+ +G NP+ TYN ++ + ++ A + M +
Sbjct: 318 HIIKTLCKNEKVDDAYLLLDEMIQKGANPDTWTYNSIMAYHCDHCEVNRATKLLSRMDRT 377
Query: 272 KCEIDVVTYTTIVHGFGVVGEIKRARNVFDGMVNGGVLPSVATYNAMIQVLC-KKDSVEN 330
KC D TY ++ +G RA +++GM P+VATY MI L KK +E
Sbjct: 378 KCLPDRHTYNMVLKLLIRIGRFDRATEIWEGMSERKFYPTVATYTVMIHGLVRKKGKLEE 437
Query: 331 AILVFEEMVGKGYMPNSTTYNVVIRGLCHTGEMERALEFVGRMK 374
A FE M+ +G P STT ++ L G+M+ G+M+
Sbjct: 438 ACRYFEMMIDEGIPPYSTTVEMLRNRLVGWGQMDVVDVLAGKME 481
Score = 109 bits (272), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 77/309 (24%), Positives = 138/309 (44%), Gaps = 5/309 (1%)
Query: 171 QSLNSFNTILDLLCKEKKVEKAYNLFKVFR--GKFKADVISYNVIANGWCLVKRTNKALE 228
SL S++ ++++L K+ ++ R F+ + ++ + ++A
Sbjct: 100 HSLESYHILVEILGSSKQFALLWDFLIEAREYNYFEISSKVFWIVFRAYSRANLPSEACR 159
Query: 229 VLKEMVDRGLNPNLTTYNIVLKGYFRAGQIEEAWRFFLEMKKRKCEIDVVTYTTIVHGFG 288
MV+ G+ P + + +L + A FF + K TY+ +V G+
Sbjct: 160 AFNRMVEFGIKPCVDDLDQLLHSLCDKKHVNHAQEFFGKAKGFGIVPSAKTYSILVRGWA 219
Query: 289 VVGEIKRARNVFDGMVNGGVLPSVATYNAMIQVLCKKDSVENAILVFEEMVGKGYMPNST 348
+ + AR VFD M+ + + YNA++ LCK V+ +F+EM G P++
Sbjct: 220 RIRDASGARKVFDEMLERNCVVDLLAYNALLDALCKSGDVDGGYKMFQEMGNLGLKPDAY 279
Query: 349 TYNVVIRGLCHTGEMERALEFVGRMKDDECEPNVQTYNILIRYFCDAGEIERGLELFEKM 408
++ + I C G++ A + + RMK + PNV T+N +I+ C +++ L ++M
Sbjct: 280 SFAIFIHAYCDAGDVHSAYKVLDRMKRYDLVPNVYTFNHIIKTLCKNEKVDDAYLLLDEM 339
Query: 409 GSGVCLPNLDTYNILISSMFVRKKSDDLLVAGKLLIEMVDRGFMPRKFTFNRVLNGLLLI 468
P+ TYN S M ++ A KLL M +P + T+N VL L+ I
Sbjct: 340 IQKGANPDTWTYN---SIMAYHCDHCEVNRATKLLSRMDRTKCLPDRHTYNMVLKLLIRI 396
Query: 469 GNQGLAKEI 477
G A EI
Sbjct: 397 GRFDRATEI 405
>sp|Q9LQ14|PPR96_ARATH Pentatricopeptide repeat-containing protein At1g62930,
chloroplastic OS=Arabidopsis thaliana GN=At1g62930 PE=2
SV=2
Length = 629
Score = 186 bits (472), Expect = 4e-46, Method: Compositional matrix adjust.
Identities = 104/366 (28%), Positives = 186/366 (50%), Gaps = 4/366 (1%)
Query: 124 TLVHRMKSLSLGPTQKTFAIIAERYVSAGKADRAVKIFLSMHEHGCRQSLNSFNTILDLL 183
L+ RM + P T+ + G D A+ + M + + + TI+D L
Sbjct: 206 ALIDRMVARGCQPDLFTYGTVVNGLCKRGDIDLALSLLKKMEKGKIEADVVIYTTIIDAL 265
Query: 184 CKEKKVEKAYNLFKVFRGK-FKADVISYNVIANGWCLVKRTNKALEVLKEMVDRGLNPNL 242
C K V A NLF K + +V++YN + C R + A +L +M++R +NPN+
Sbjct: 266 CNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRCLCNYGRWSDASRLLSDMIERKINPNV 325
Query: 243 TTYNIVLKGYFRAGQIEEAWRFFLEMKKRKCEIDVVTYTTIVHGFGVVGEIKRARNVFDG 302
T++ ++ + + G++ EA + + EM KR + D+ TY+++++GF + + A+++F+
Sbjct: 326 VTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFEL 385
Query: 303 MVNGGVLPSVATYNAMIQVLCKKDSVENAILVFEEMVGKGYMPNSTTYNVVIRGLCHTGE 362
M++ P+V TYN +I+ CK VE + +F EM +G + N+ TYN +I+GL G+
Sbjct: 386 MISKDCFPNVVTYNTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYNTLIQGLFQAGD 445
Query: 363 MERALEFVGRMKDDECEPNVQTYNILIRYFCDAGEIERGLELFEKMGSGVCLPNLDTYNI 422
+ A + +M D P++ TY+IL+ C G++E+ L +FE + P++ TYNI
Sbjct: 446 CDMAQKIFKKMVSDGVPPDIITYSILLDGLCKYGKLEKALVVFEYLQKSKMEPDIYTYNI 505
Query: 423 LISSMFVRKKSDDLLVAGKLLIEMVDRGFMPRKFTFNRVLNGLLLIGNQGLAKEILRLQS 482
+I M K +D L + +G P + +++G G + A + R
Sbjct: 506 MIEGMCKAGKVED---GWDLFCSLSLKGVKPNVIIYTTMISGFCRKGLKEEADALFREMK 562
Query: 483 RCGRLP 488
G LP
Sbjct: 563 EDGTLP 568
Score = 173 bits (439), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 102/357 (28%), Positives = 178/357 (49%), Gaps = 4/357 (1%)
Query: 110 IDLAARLRDYRTVWTLVHRMKSLSLGPTQKTFAIIAERYVSAGKADRAVKIFLSMHEHGC 169
ID ++ L M + + P T+ + + G+ A ++ M E
Sbjct: 262 IDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRCLCNYGRWSDASRLLSDMIERKI 321
Query: 170 RQSLNSFNTILDLLCKEKKVEKAYNLF-KVFRGKFKADVISYNVIANGWCLVKRTNKALE 228
++ +F+ ++D KE K+ +A L+ ++ + D+ +Y+ + NG+C+ R ++A
Sbjct: 322 NPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKH 381
Query: 229 VLKEMVDRGLNPNLTTYNIVLKGYFRAGQIEEAWRFFLEMKKRKCEIDVVTYTTIVHGFG 288
+ + M+ + PN+ TYN ++KG+ +A ++EE F EM +R + VTY T++ G
Sbjct: 382 MFELMISKDCFPNVVTYNTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYNTLIQGLF 441
Query: 289 VVGEIKRARNVFDGMVNGGVLPSVATYNAMIQVLCKKDSVENAILVFEEMVGKGYMPNST 348
G+ A+ +F MV+ GV P + TY+ ++ LCK +E A++VFE + P+
Sbjct: 442 QAGDCDMAQKIFKKMVSDGVPPDIITYSILLDGLCKYGKLEKALVVFEYLQKSKMEPDIY 501
Query: 349 TYNVVIRGLCHTGEMERALEFVGRMKDDECEPNVQTYNILIRYFCDAGEIERGLELFEKM 408
TYN++I G+C G++E + + +PNV Y +I FC G E LF +M
Sbjct: 502 TYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPNVIIYTTMISGFCRKGLKEEADALFREM 561
Query: 409 GSGVCLPNLDTYNILISSMFVRKKSDDLLVAGKLLIEMVDRGFMPRKFTFNRVLNGL 465
LPN TYN LI + R + D + +L+ EM GF+ T + V+N L
Sbjct: 562 KEDGTLPNSGTYNTLIRA---RLRDGDKAASAELIKEMRSCGFVGDASTISMVINML 615
Score = 166 bits (421), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 110/404 (27%), Positives = 194/404 (48%), Gaps = 39/404 (9%)
Query: 102 SPSSFDHAIDLAARLRDYRTVWTLVHRMKSLSLGPTQKTFAIIAERYVSAGKADRAVKIF 161
S F+ + A++ + V +L RM++L + ++ I+ + + A+ +
Sbjct: 79 SIVEFNKLLSAIAKMNKFDLVISLGERMQNLRISYDLYSYNILINCFCRRSQLPLALAVL 138
Query: 162 LSMHEHGCRQSLNSFNTILDLLCKEKKVEKAYNLF-KVFRGKFKADVISYNVIANGWCLV 220
M + G + + +++L+ C K++ +A L ++F +++ + +++N + +G L
Sbjct: 139 GKMMKLGYEPDIVTLSSLLNGYCHGKRISEAVALVDQMFVMEYQPNTVTFNTLIHGLFLH 198
Query: 221 KRTNKALEVLKEMVDRGLNPNLTTYNIVLKGYFRAGQIEEAWRFFLEMKKRKCEIDVVTY 280
+ ++A+ ++ MV RG P+L TY V+ G + G I+ A +M+K K E DVV Y
Sbjct: 199 NKASEAVALIDRMVARGCQPDLFTYGTVVNGLCKRGDIDLALSLLKKMEKGKIEADVVIY 258
Query: 281 TTIVHGFGVVGEIKRARNVFDGMVNGGVLPSVATYNAMIQVLCK-----------KDSVE 329
TTI+ + A N+F M N G+ P+V TYN++I+ LC D +E
Sbjct: 259 TTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRCLCNYGRWSDASRLLSDMIE 318
Query: 330 NAI------------------------LVFEEMVGKGYMPNSTTYNVVIRGLCHTGEMER 365
I +++EM+ + P+ TY+ +I G C ++
Sbjct: 319 RKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDE 378
Query: 366 ALEFVGRMKDDECEPNVQTYNILIRYFCDAGEIERGLELFEKMGSGVCLPNLDTYNILIS 425
A M +C PNV TYN LI+ FC A +E G+ELF +M + N TYN LI
Sbjct: 379 AKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYNTLIQ 438
Query: 426 SMFVRKKSDDLLVAGKLLIEMVDRGFMPRKFTFNRVLNGLLLIG 469
+F ++ D +A K+ +MV G P T++ +L+GL G
Sbjct: 439 GLF---QAGDCDMAQKIFKKMVSDGVPPDIITYSILLDGLCKYG 479
Score = 127 bits (319), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 77/277 (27%), Positives = 137/277 (49%), Gaps = 2/277 (0%)
Query: 125 LVHRMKSLSLGPTQKTFAIIAERYVSAGKADRAVKIFLSMHEHGCRQSLNSFNTILDLLC 184
L M S+ P T++ + + + D A +F M C ++ ++NT++ C
Sbjct: 347 LYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFC 406
Query: 185 KEKKVEKAYNLFKVFRGK-FKADVISYNVIANGWCLVKRTNKALEVLKEMVDRGLNPNLT 243
K K+VE+ LF+ + + ++YN + G + A ++ K+MV G+ P++
Sbjct: 407 KAKRVEEGMELFREMSQRGLVGNTVTYNTLIQGLFQAGDCDMAQKIFKKMVSDGVPPDII 466
Query: 244 TYNIVLKGYFRAGQIEEAWRFFLEMKKRKCEIDVVTYTTIVHGFGVVGEIKRARNVFDGM 303
TY+I+L G + G++E+A F ++K K E D+ TY ++ G G+++ ++F +
Sbjct: 467 TYSILLDGLCKYGKLEKALVVFEYLQKSKMEPDIYTYNIMIEGMCKAGKVEDGWDLFCSL 526
Query: 304 VNGGVLPSVATYNAMIQVLCKKDSVENAILVFEEMVGKGYMPNSTTYNVVIRGLCHTGEM 363
GV P+V Y MI C+K E A +F EM G +PNS TYN +IR G+
Sbjct: 527 SLKGVKPNVIIYTTMISGFCRKGLKEEADALFREMKEDGTLPNSGTYNTLIRARLRDGDK 586
Query: 364 ERALEFVGRMKDDECEPNVQTYNILIRYFCDAGEIER 400
+ E + M+ + T +++I D G +E+
Sbjct: 587 AASAELIKEMRSCGFVGDASTISMVINMLHD-GRLEK 622
Score = 112 bits (280), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 86/356 (24%), Positives = 172/356 (48%), Gaps = 17/356 (4%)
Query: 132 LSLGPTQKTFAIIAERYVSAGKADRAVK---IFLSMHEHGCRQSLNSFNTILDLLCKEKK 188
L + +Q +A+R+ KA ++ S + R+ L S N +LDL K
Sbjct: 7 LGIVASQSKKMSLAKRFAQLRKASPLFSLRGVYFSAASYDYREKL-SRNVLLDL-----K 60
Query: 189 VEKAYNLF-KVFRGKFKADVISYNVIANGWCLVKRTNKALEVLKEMVDRGLNPNLTTYNI 247
++ A +LF ++ + + ++ +N + + + + + + + + M + ++ +L +YNI
Sbjct: 61 LDDAVDLFGEMVQSRPLPSIVEFNKLLSAIAKMNKFDLVISLGERMQNLRISYDLYSYNI 120
Query: 248 VLKGYFRAGQIEEAWRFFLEMKKRKCEIDVVTYTTIVHGFGVVGEIKRARNVFDGMVNGG 307
++ + R Q+ A +M K E D+VT +++++G+ I A + D M
Sbjct: 121 LINCFCRRSQLPLALAVLGKMMKLGYEPDIVTLSSLLNGYCHGKRISEAVALVDQMFVME 180
Query: 308 VLPSVATYNAMIQVLCKKDSVENAILVFEEMVGKGYMPNSTTYNVVIRGLCHTGEMERAL 367
P+ T+N +I L + A+ + + MV +G P+ TY V+ GLC G+++ AL
Sbjct: 181 YQPNTVTFNTLIHGLFLHNKASEAVALIDRMVARGCQPDLFTYGTVVNGLCKRGDIDLAL 240
Query: 368 EFVGRMKDDECEPNVQTYNILIRYFCDAGEIERGLELFEKMGSGVCLPNLDTYNILISSM 427
+ +M+ + E +V Y +I C+ + L LF +M + PN+ TYN LI +
Sbjct: 241 SLLKKMEKGKIEADVVIYTTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRCL 300
Query: 428 FVRKKSDDLLVAGKLLIEMVDRGFMPRKFTFNRVLNGLL----LIGNQGLAKEILR 479
+ D A +LL +M++R P TF+ +++ + L+ + L E+++
Sbjct: 301 CNYGRWSD---ASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIK 353
>sp|Q9LFQ4|PP383_ARATH Pentatricopeptide repeat-containing protein At5g15010,
mitochondrial OS=Arabidopsis thaliana GN=At5g15010 PE=2
SV=2
Length = 572
Score = 185 bits (469), Expect = 9e-46, Method: Compositional matrix adjust.
Identities = 118/421 (28%), Positives = 201/421 (47%), Gaps = 10/421 (2%)
Query: 37 AADPAALASLILT-STDPRTLTQTLHCPSLHWTPQLVDQIIKRLWNHALKALHFFNILSY 95
+ D ++ L+ +D + L L + + +LV +I+ R+ N A FF
Sbjct: 94 SEDVGKISKLVKDCGSDRKELRNKLEECDVKPSNELVVEILSRVRNDWETAFTFFVWAGK 153
Query: 96 HPTYAHSPSSFDHAIDLAARLRDYRTVWTLVHRMKSLSLG-PTQKTFAIIAERYVSAGKA 154
Y S + I + ++R + T WTL+ M+ S +T I+ +Y +
Sbjct: 154 QQGYVRSVREYHSMISILGKMRKFDTAWTLIDEMRKFSPSLVNSQTLLIMIRKYCAVHDV 213
Query: 155 DRAVKIFLSMHEHGCRQSLNSFNTILDLLCKEKKVEKAYNLFKVFRGKFKADVISYNVIA 214
+A+ F + ++ F ++L LC+ K V A +L + K+ D S+N++
Sbjct: 214 GKAINTFHAYKRFKLEMGIDDFQSLLSALCRYKNVSDAGHLIFCNKDKYPFDAKSFNIVL 273
Query: 215 NGWC-LVKRTNKALEVLKEMVDRGLNPNLTTYNIVLKGYFRAGQIEEAWRFFLEMKKRKC 273
NGWC ++ +A V EM + G+ ++ +Y+ ++ Y + G + + + F MKK
Sbjct: 274 NGWCNVIGSPREAERVWMEMGNVGVKHDVVSYSSMISCYSKGGSLNKVLKLFDRMKKECI 333
Query: 274 EIDVVTYTTIVHGFGVVGEIKRARNVFDGM-VNGGVLPSVATYNAMIQVLCKKDSVENAI 332
E D Y +VH + ARN+ M G+ P+V TYN++I+ LCK E A
Sbjct: 334 EPDRKVYNAVVHALAKASFVSEARNLMKTMEEEKGIEPNVVTYNSLIKPLCKARKTEEAK 393
Query: 333 LVFEEMVGKGYMPNSTTYNVVIRGLCHTGEMERALEFVGRMKDDECEPNVQTYNILIRYF 392
VF+EM+ KG P TY+ +R L TG E E + +M+ CEP V+TY +LIR
Sbjct: 394 QVFDEMLEKGLFPTIRTYHAFMRIL-RTG--EEVFELLAKMRKMGCEPTVETYIMLIRKL 450
Query: 393 CDAGEIERGLELFEKMGSGVCLPNLDTYNILISSMFVRKKSDDLLVAGKLLIEMVDRGFM 452
C + + L L+++M P+L +Y ++I +F+ K ++ A EM D+G
Sbjct: 451 CRWRDFDNVLLLWDEMKEKTVGPDLSSYIVMIHGLFLNGKIEE---AYGYYKEMKDKGMR 507
Query: 453 P 453
P
Sbjct: 508 P 508
Score = 65.9 bits (159), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 53/245 (21%), Positives = 105/245 (42%), Gaps = 7/245 (2%)
Query: 101 HSPSSFDHAIDLAARLRDYRTVWTLVHRMKSLSLGPTQKTFAIIAERYVSAGKADRAVKI 160
H S+ I ++ V L RMK + P +K + + A A +
Sbjct: 300 HDVVSYSSMISCYSKGGSLNKVLKLFDRMKKECIEPDRKVYNAVVHALAKASFVSEARNL 359
Query: 161 FLSMHEH-GCRQSLNSFNTILDLLCKEKKVEKAYNLFKVF--RGKFKADVISYNVIANGW 217
+M E G ++ ++N+++ LCK +K E+A +F +G F + +Y+
Sbjct: 360 MKTMEEEKGIEPNVVTYNSLIKPLCKARKTEEAKQVFDEMLEKGLFPT-IRTYHAFMR-- 416
Query: 218 CLVKRTNKALEVLKEMVDRGLNPNLTTYNIVLKGYFRAGQIEEAWRFFLEMKKRKCEIDV 277
+++ + E+L +M G P + TY ++++ R + + EMK++ D+
Sbjct: 417 -ILRTGEEVFELLAKMRKMGCEPTVETYIMLIRKLCRWRDFDNVLLLWDEMKEKTVGPDL 475
Query: 278 VTYTTIVHGFGVVGEIKRARNVFDGMVNGGVLPSVATYNAMIQVLCKKDSVENAILVFEE 337
+Y ++HG + G+I+ A + M + G+ P+ + + K E I +
Sbjct: 476 SSYIVMIHGLFLNGKIEEAYGYYKEMKDKGMRPNENVEDMIQSWFSGKQYAEQRITDSKG 535
Query: 338 MVGKG 342
V KG
Sbjct: 536 EVNKG 540
>sp|Q9LPX2|PPR39_ARATH Pentatricopeptide repeat-containing protein At1g12775,
mitochondrial OS=Arabidopsis thaliana GN=At1g12775 PE=2
SV=1
Length = 644
Score = 184 bits (468), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 89/312 (28%), Positives = 170/312 (54%), Gaps = 1/312 (0%)
Query: 125 LVHRMKSLSLGPTQKTFAIIAERYVSAGKADRAVKIFLSMHEHGCRQSLNSFNTILDLLC 184
L+ RM P + T+ + +G+ A+++ M E + ++ I+D LC
Sbjct: 215 LIDRMVETGFQPNEVTYGPVLNVMCKSGQTALAMELLRKMEERNIKLDAVKYSIIIDGLC 274
Query: 185 KEKKVEKAYNLFKVFRGK-FKADVISYNVIANGWCLVKRTNKALEVLKEMVDRGLNPNLT 243
K+ ++ A+NLF K FKAD+I+YN + G+C R + ++L++M+ R ++PN+
Sbjct: 275 KDGSLDNAFNLFNEMEIKGFKADIITYNTLIGGFCNAGRWDDGAKLLRDMIKRKISPNVV 334
Query: 244 TYNIVLKGYFRAGQIEEAWRFFLEMKKRKCEIDVVTYTTIVHGFGVVGEIKRARNVFDGM 303
T+++++ + + G++ EA + EM +R + +TY +++ GF ++ A + D M
Sbjct: 335 TFSVLIDSFVKEGKLREADQLLKEMMQRGIAPNTITYNSLIDGFCKENRLEEAIQMVDLM 394
Query: 304 VNGGVLPSVATYNAMIQVLCKKDSVENAILVFEEMVGKGYMPNSTTYNVVIRGLCHTGEM 363
++ G P + T+N +I CK + +++ + +F EM +G + N+ TYN +++G C +G++
Sbjct: 395 ISKGCDPDIMTFNILINGYCKANRIDDGLELFREMSLRGVIANTVTYNTLVQGFCQSGKL 454
Query: 364 ERALEFVGRMKDDECEPNVQTYNILIRYFCDAGEIERGLELFEKMGSGVCLPNLDTYNIL 423
E A + M P++ +Y IL+ CD GE+E+ LE+F K+ ++ Y I+
Sbjct: 455 EVAKKLFQEMVSRRVRPDIVSYKILLDGLCDNGELEKALEIFGKIEKSKMELDIGIYMII 514
Query: 424 ISSMFVRKKSDD 435
I M K DD
Sbjct: 515 IHGMCNASKVDD 526
Score = 174 bits (440), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 108/379 (28%), Positives = 187/379 (49%), Gaps = 4/379 (1%)
Query: 100 AHSPSSFDHAIDLAARLRDYRTVWTLVHRMKSLSLGPTQKTFAIIAERYVSAGKADRAVK 159
AHS + I+ R R ++ + ++ L P F + + A++
Sbjct: 120 AHSIYTLSIMINCFCRCRKLSYAFSTMGKIMKLGYEPDTVIFNTLLNGLCLECRVSEALE 179
Query: 160 IFLSMHEHGCRQSLNSFNTILDLLCKEKKVEKAYNLF-KVFRGKFKADVISYNVIANGWC 218
+ M E G + +L + NT+++ LC KV A L ++ F+ + ++Y + N C
Sbjct: 180 LVDRMVEMGHKPTLITLNTLVNGLCLNGKVSDAVVLIDRMVETGFQPNEVTYGPVLNVMC 239
Query: 219 LVKRTNKALEVLKEMVDRGLNPNLTTYNIVLKGYFRAGQIEEAWRFFLEMKKRKCEIDVV 278
+T A+E+L++M +R + + Y+I++ G + G ++ A+ F EM+ + + D++
Sbjct: 240 KSGQTALAMELLRKMEERNIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEIKGFKADII 299
Query: 279 TYTTIVHGFGVVGEIKRARNVFDGMVNGGVLPSVATYNAMIQVLCKKDSVENAILVFEEM 338
TY T++ GF G + M+ + P+V T++ +I K+ + A + +EM
Sbjct: 300 TYNTLIGGFCNAGRWDDGAKLLRDMIKRKISPNVVTFSVLIDSFVKEGKLREADQLLKEM 359
Query: 339 VGKGYMPNSTTYNVVIRGLCHTGEMERALEFVGRMKDDECEPNVQTYNILIRYFCDAGEI 398
+ +G PN+ TYN +I G C +E A++ V M C+P++ T+NILI +C A I
Sbjct: 360 MQRGIAPNTITYNSLIDGFCKENRLEEAIQMVDLMISKGCDPDIMTFNILINGYCKANRI 419
Query: 399 ERGLELFEKMGSGVCLPNLDTYNILISSMFVRKKSDDLLVAGKLLIEMVDRGFMPRKFTF 458
+ GLELF +M + N TYN L+ +S L VA KL EMV R P ++
Sbjct: 420 DDGLELFREMSLRGVIANTVTYNTLVQGFC---QSGKLEVAKKLFQEMVSRRVRPDIVSY 476
Query: 459 NRVLNGLLLIGNQGLAKEI 477
+L+GL G A EI
Sbjct: 477 KILLDGLCDNGELEKALEI 495
Score = 155 bits (391), Expect = 8e-37, Method: Compositional matrix adjust.
Identities = 102/376 (27%), Positives = 175/376 (46%), Gaps = 4/376 (1%)
Query: 105 SFDHAIDLAARLRDYRTVWTLVHRMKSLSLGPTQKTFAIIAERYVSAGKADRAVKIFLSM 164
F+ A+ + Y V L +M+S + + T +I+ + K A +
Sbjct: 90 DFNRLFSAIAKTKQYELVLALCKQMESKGIAHSIYTLSIMINCFCRCRKLSYAFSTMGKI 149
Query: 165 HEHGCRQSLNSFNTILDLLCKEKKVEKAYNLF-KVFRGKFKADVISYNVIANGWCLVKRT 223
+ G FNT+L+ LC E +V +A L ++ K +I+ N + NG CL +
Sbjct: 150 MKLGYEPDTVIFNTLLNGLCLECRVSEALELVDRMVEMGHKPTLITLNTLVNGLCLNGKV 209
Query: 224 NKALEVLKEMVDRGLNPNLTTYNIVLKGYFRAGQIEEAWRFFLEMKKRKCEIDVVTYTTI 283
+ A+ ++ MV+ G PN TY VL ++GQ A +M++R ++D V Y+ I
Sbjct: 210 SDAVVLIDRMVETGFQPNEVTYGPVLNVMCKSGQTALAMELLRKMEERNIKLDAVKYSII 269
Query: 284 VHGFGVVGEIKRARNVFDGMVNGGVLPSVATYNAMIQVLCKKDSVENAILVFEEMVGKGY 343
+ G G + A N+F+ M G + TYN +I C ++ + +M+ +
Sbjct: 270 IDGLCKDGSLDNAFNLFNEMEIKGFKADIITYNTLIGGFCNAGRWDDGAKLLRDMIKRKI 329
Query: 344 MPNSTTYNVVIRGLCHTGEMERALEFVGRMKDDECEPNVQTYNILIRYFCDAGEIERGLE 403
PN T++V+I G++ A + + M PN TYN LI FC +E ++
Sbjct: 330 SPNVVTFSVLIDSFVKEGKLREADQLLKEMMQRGIAPNTITYNSLIDGFCKENRLEEAIQ 389
Query: 404 LFEKMGSGVCLPNLDTYNILISSMFVRKKSDDLLVAGKLLIEMVDRGFMPRKFTFNRVLN 463
+ + M S C P++ T+NILI+ + DD L +L EM RG + T+N ++
Sbjct: 390 MVDLMISKGCDPDIMTFNILINGYCKANRIDDGL---ELFREMSLRGVIANTVTYNTLVQ 446
Query: 464 GLLLIGNQGLAKEILR 479
G G +AK++ +
Sbjct: 447 GFCQSGKLEVAKKLFQ 462
Score = 147 bits (370), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 81/302 (26%), Positives = 157/302 (51%), Gaps = 1/302 (0%)
Query: 125 LVHRMKSLSLGPTQKTFAIIAERYVSAGKADRAVKIFLSMHEHGCRQSLNSFNTILDLLC 184
L+ M + P TF+++ + +V GK A ++ M + G + ++N+++D C
Sbjct: 320 LLRDMIKRKISPNVVTFSVLIDSFVKEGKLREADQLLKEMMQRGIAPNTITYNSLIDGFC 379
Query: 185 KEKKVEKAYNLFKVFRGK-FKADVISYNVIANGWCLVKRTNKALEVLKEMVDRGLNPNLT 243
KE ++E+A + + K D++++N++ NG+C R + LE+ +EM RG+ N
Sbjct: 380 KENRLEEAIQMVDLMISKGCDPDIMTFNILINGYCKANRIDDGLELFREMSLRGVIANTV 439
Query: 244 TYNIVLKGYFRAGQIEEAWRFFLEMKKRKCEIDVVTYTTIVHGFGVVGEIKRARNVFDGM 303
TYN +++G+ ++G++E A + F EM R+ D+V+Y ++ G GE+++A +F +
Sbjct: 440 TYNTLVQGFCQSGKLEVAKKLFQEMVSRRVRPDIVSYKILLDGLCDNGELEKALEIFGKI 499
Query: 304 VNGGVLPSVATYNAMIQVLCKKDSVENAILVFEEMVGKGYMPNSTTYNVVIRGLCHTGEM 363
+ + Y +I +C V++A +F + KG ++ YN++I LC +
Sbjct: 500 EKSKMELDIGIYMIIIHGMCNASKVDDAWDLFCSLPLKGVKLDARAYNIMISELCRKDSL 559
Query: 364 ERALEFVGRMKDDECEPNVQTYNILIRYFCDAGEIERGLELFEKMGSGVCLPNLDTYNIL 423
+A +M ++ P+ TYNILIR + EL E+M S ++ T ++
Sbjct: 560 SKADILFRKMTEEGHAPDELTYNILIRAHLGDDDATTAAELIEEMKSSGFPADVSTVKMV 619
Query: 424 IS 425
I+
Sbjct: 620 IN 621
Score = 139 bits (351), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 79/298 (26%), Positives = 148/298 (49%), Gaps = 4/298 (1%)
Query: 105 SFDHAIDLAARLRDYRTVWTLVHRMKSLSLGPTQKTFAIIAERYVSAGKADRAVKIFLSM 164
+F ID + R L+ M + P T+ + + + + + A+++ M
Sbjct: 335 TFSVLIDSFVKEGKLREADQLLKEMMQRGIAPNTITYNSLIDGFCKENRLEEAIQMVDLM 394
Query: 165 HEHGCRQSLNSFNTILDLLCKEKKVEKAYNLFK--VFRGKFKADVISYNVIANGWCLVKR 222
GC + +FN +++ CK +++ LF+ RG A+ ++YN + G+C +
Sbjct: 395 ISKGCDPDIMTFNILINGYCKANRIDDGLELFREMSLRGVI-ANTVTYNTLVQGFCQSGK 453
Query: 223 TNKALEVLKEMVDRGLNPNLTTYNIVLKGYFRAGQIEEAWRFFLEMKKRKCEIDVVTYTT 282
A ++ +EMV R + P++ +Y I+L G G++E+A F +++K K E+D+ Y
Sbjct: 454 LEVAKKLFQEMVSRRVRPDIVSYKILLDGLCDNGELEKALEIFGKIEKSKMELDIGIYMI 513
Query: 283 IVHGFGVVGEIKRARNVFDGMVNGGVLPSVATYNAMIQVLCKKDSVENAILVFEEMVGKG 342
I+HG ++ A ++F + GV YN MI LC+KDS+ A ++F +M +G
Sbjct: 514 IIHGMCNASKVDDAWDLFCSLPLKGVKLDARAYNIMISELCRKDSLSKADILFRKMTEEG 573
Query: 343 YMPNSTTYNVVIRGLCHTGEMERALEFVGRMKDDECEPNVQTYNILIRYFCDAGEIER 400
+ P+ TYN++IR + A E + MK +V T ++I +GE+++
Sbjct: 574 HAPDELTYNILIRAHLGDDDATTAAELIEEMKSSGFPADVSTVKMVINML-SSGELDK 630
Score = 114 bits (284), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 81/313 (25%), Positives = 145/313 (46%), Gaps = 39/313 (12%)
Query: 188 KVEKAYNLFK-VFRGKFKADVISYNVIANGWCLVKRTNKALEVLKEMVDRGLNPNLTTYN 246
K + A +LF+ + + + VI +N + + K+ L + K+M +G+ ++ T +
Sbjct: 68 KADDAVDLFRDMIQSRPLPTVIDFNRLFSAIAKTKQYELVLALCKQMESKGIAHSIYTLS 127
Query: 247 IVLKGYFRAGQIEEAWRFFLEMKKRKCEIDVVTYTTIVHGFGVVGEIKRARNVFDGMVNG 306
I++ + R ++ A+ ++ K E D V + T+++G + + A + D MV
Sbjct: 128 IMINCFCRCRKLSYAFSTMGKIMKLGYEPDTVIFNTLLNGLCLECRVSEALELVDRMVEM 187
Query: 307 GVLPSVATYNAMIQVLCKKDSVENAILVFEEMVGKGYMPNSTT----------------- 349
G P++ T N ++ LC V +A+++ + MV G+ PN T
Sbjct: 188 GHKPTLITLNTLVNGLCLNGKVSDAVVLIDRMVETGFQPNEVTYGPVLNVMCKSGQTALA 247
Query: 350 ------------------YNVVIRGLCHTGEMERALEFVGRMKDDECEPNVQTYNILIRY 391
Y+++I GLC G ++ A M+ + ++ TYN LI
Sbjct: 248 MELLRKMEERNIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEIKGFKADIITYNTLIGG 307
Query: 392 FCDAGEIERGLELFEKMGSGVCLPNLDTYNILISSMFVRKKSDDLLVAGKLLIEMVDRGF 451
FC+AG + G +L M PN+ T+++LI S FV K L A +LL EM+ RG
Sbjct: 308 FCNAGRWDDGAKLLRDMIKRKISPNVVTFSVLIDS-FV--KEGKLREADQLLKEMMQRGI 364
Query: 452 MPRKFTFNRVLNG 464
P T+N +++G
Sbjct: 365 APNTITYNSLIDG 377
Score = 45.1 bits (105), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 39/183 (21%), Positives = 70/183 (38%), Gaps = 39/183 (21%)
Query: 288 GVVG-EIKRARNVFDGMVNGGVLPSVATYNAMIQVLCKKDSVENAILVFEEMVGKGYMPN 346
G+VG + A ++F M+ LP+V +N + + K E + + ++M KG +
Sbjct: 63 GLVGIKADDAVDLFRDMIQSRPLPTVIDFNRLFSAIAKTKQYELVLALCKQMESKGIAHS 122
Query: 347 STTYNVVIRGLCHTGEMERALEFVGRMKDDECEPNVQTYNILIRYFCDAGEIERGLELFE 406
T +++I C ++ A +G++ EP+ +N L+ C + LEL +
Sbjct: 123 IYTLSIMINCFCRCRKLSYAFSTMGKIMKLGYEPDTVIFNTLLNGLCLECRVSEALELVD 182
Query: 407 KMGSGVCLPNLDTYNILISSMFVRKKSDDLLVAGKLLIEMVDRGFMPRKFTFNRVLNGLL 466
+M V+ G P T N ++NGL
Sbjct: 183 RM--------------------------------------VEMGHKPTLITLNTLVNGLC 204
Query: 467 LIG 469
L G
Sbjct: 205 LNG 207
>sp|Q9FH87|PP447_ARATH Putative pentatricopeptide repeat-containing protein At5g65820
OS=Arabidopsis thaliana GN=At5g65820 PE=3 SV=1
Length = 637
Score = 184 bits (466), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 128/496 (25%), Positives = 219/496 (44%), Gaps = 77/496 (15%)
Query: 56 LTQTLHCPSLHWTPQLVDQIIKRLWNHALKALHFFNILSYHPTYAHSPSSFDHAIDLAAR 115
L L+ + P L+++++ R + FF + P Y HS + + + ++
Sbjct: 100 LELALNESGVELRPGLIERVLNRCGDAGNLGYRFFVWAAKQPRYCHSIEVYKSMVKILSK 159
Query: 116 LRDYRTVWTLVHRMKSLSLGPTQ-KTFAIIAERYVSAGKADRAVKIFLSMHEHGCRQSLN 174
+R + VW L+ M+ + + + F ++ +R+ SA +A+++ M + G
Sbjct: 160 MRQFGAVWGLIEEMRKENPQLIEPELFVVLVQRFASADMVKKAIEVLDEMPKFGFEPDEY 219
Query: 175 SFNTILDLLCKEKKVEKAYNLFKVFRGKFKADVISYNVIANGWCLVKRTNKALEVLKEMV 234
F +LD LCK V+ A LF+ R +F ++ + + GWC V + +A VL +M
Sbjct: 220 VFGCLLDALCKHGSVKDAAKLFEDMRMRFPVNLRYFTSLLYGWCRVGKMMEAKYVLVQMN 279
Query: 235 DRGLNPNLTTYNIVLKGYFRAGQ-----------------------------------IE 259
+ G P++ Y +L GY AG+ +E
Sbjct: 280 EAGFEPDIVDYTNLLSGYANAGKMADAYDLLRDMRRRGFEPNANCYTVLIQALCKVDRME 339
Query: 260 EAWRFFLEMKKRKCEIDVVTYTTIVHGFGVVGEIKRARNVFDGMVNGGVLPSVATYNAMI 319
EA + F+EM++ +CE DVVTYT +V GF G+I + V D M+ G++PS TY ++
Sbjct: 340 EAMKVFVEMERYECEADVVTYTALVSGFCKWGKIDKCYIVLDDMIKKGLMPSELTYMHIM 399
Query: 320 QVLCKKDSVENAILVFEEMVGKGYMPNSTTYNVVIRGLCHTGEMERALEFVGRMKDDECE 379
KK+S E + + E+M Y P+ YNVVIR C GE++ A+ M+++
Sbjct: 400 VAHEKKESFEECLELMEKMRQIEYHPDIGIYNVVIRLACKLGEVKEAVRLWNEMEENGLS 459
Query: 380 PNVQTYNILIRYFCDAG-----------EIERGLELFEKMGS------------------ 410
P V T+ I+I G + RGL + G+
Sbjct: 460 PGVDTFVIMINGLASQGCLLEASDHFKEMVTRGLFSVSQYGTLKLLLNTVLKDKKLEMAK 519
Query: 411 ---------GVCLPNLDTYNILISSMFVRKKSDDLLVAGKLLIEMVDRGFMPRKFTFNRV 461
G C N+ ++ I I ++F + + A IEM++ FMP+ TF ++
Sbjct: 520 DVWSCITSKGACELNVLSWTIWIHALFSKGYEKE---ACSYCIEMIEMDFMPQPDTFAKL 576
Query: 462 LNGLLLIGNQGLAKEI 477
+ GL + N+ A EI
Sbjct: 577 MKGLKKLYNREFAGEI 592
Score = 42.7 bits (99), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 39/179 (21%), Positives = 77/179 (43%), Gaps = 5/179 (2%)
Query: 311 SVATYNAMIQVLCKKDSVENAILVFEEMVGKG-YMPNSTTYNVVIRGLCHTGEMERALEF 369
S+ Y +M+++L K + EEM + + + V+++ +++A+E
Sbjct: 146 SIEVYKSMVKILSKMRQFGAVWGLIEEMRKENPQLIEPELFVVLVQRFASADMVKKAIEV 205
Query: 370 VGRMKDDECEPNVQTYNILIRYFCDAGEIERGLELFEKMGSGVCLPNLDTYNILISSMFV 429
+ M EP+ + L+ C G ++ +LFE M + NL + L+
Sbjct: 206 LDEMPKFGFEPDEYVFGCLLDALCKHGSVKDAAKLFEDMRMRFPV-NLRYFTSLLYGWC- 263
Query: 430 RKKSDDLLVAGKLLIEMVDRGFMPRKFTFNRVLNGLLLIGNQGLAKEILRLQSRCGRLP 488
+ ++ A +L++M + GF P + +L+G G A ++LR R G P
Sbjct: 264 --RVGKMMEAKYVLVQMNEAGFEPDIVDYTNLLSGYANAGKMADAYDLLRDMRRRGFEP 320
>sp|Q3EDF8|PPR28_ARATH Pentatricopeptide repeat-containing protein At1g09900
OS=Arabidopsis thaliana GN=At1g09900 PE=2 SV=1
Length = 598
Score = 182 bits (461), Expect = 7e-45, Method: Compositional matrix adjust.
Identities = 102/352 (28%), Positives = 180/352 (51%), Gaps = 7/352 (1%)
Query: 115 RLRDYRTVWTLVHRMKSLSLGPTQKTFAIIAERYVSAGKADRAVKIFLSMHEHGCRQSLN 174
RL R ++ ++ P T+ ++ Y AG+ + A+ + M +
Sbjct: 149 RLGKTRKAAKILEILEGSGAVPDVITYNVMISGYCKAGEINNALSVLDRMS---VSPDVV 205
Query: 175 SFNTILDLLCKEKKVEKAYNLF-KVFRGKFKADVISYNVIANGWCLVKRTNKALEVLKEM 233
++NTIL LC K+++A + ++ + DVI+Y ++ C A+++L EM
Sbjct: 206 TYNTILRSLCDSGKLKQAMEVLDRMLQRDCYPDVITYTILIEATCRDSGVGHAMKLLDEM 265
Query: 234 VDRGLNPNLTTYNIVLKGYFRAGQIEEAWRFFLEMKKRKCEIDVVTYTTIVHGFGVVGEI 293
DRG P++ TYN+++ G + G+++EA +F +M C+ +V+T+ I+ G
Sbjct: 266 RDRGCTPDVVTYNVLVNGICKEGRLDEAIKFLNDMPSSGCQPNVITHNIILRSMCSTGRW 325
Query: 294 KRARNVFDGMVNGGVLPSVATYNAMIQVLCKKDSVENAILVFEEMVGKGYMPNSTTYNVV 353
A + M+ G PSV T+N +I LC+K + AI + E+M G PNS +YN +
Sbjct: 326 MDAEKLLADMLRKGFSPSVVTFNILINFLCRKGLLGRAIDILEKMPQHGCQPNSLSYNPL 385
Query: 354 IRGLCHTGEMERALEFVGRMKDDECEPNVQTYNILIRYFCDAGEIERGLELFEKMGSGVC 413
+ G C +M+RA+E++ RM C P++ TYN ++ C G++E +E+ ++ S C
Sbjct: 386 LHGFCKEKKMDRAIEYLERMVSRGCYPDIVTYNTMLTALCKDGKVEDAVEILNQLSSKGC 445
Query: 414 LPNLDTYNILISSMFVRKKSDDLLVAGKLLIEMVDRGFMPRKFTFNRVLNGL 465
P L TYN +I + K+ + KLL EM + P T++ ++ GL
Sbjct: 446 SPVLITYNTVIDGLAKAGKTGKAI---KLLDEMRAKDLKPDTITYSSLVGGL 494
Score = 160 bits (406), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 95/365 (26%), Positives = 185/365 (50%), Gaps = 13/365 (3%)
Query: 120 RTVWTLVHRMKSLSLGPTQKTFAIIAERYVSAGKADRAVKIFLSMHEHGCRQSLNSFNTI 179
+ ++ RM P T+ I+ E A+K+ M + GC + ++N +
Sbjct: 221 KQAMEVLDRMLQRDCYPDVITYTILIEATCRDSGVGHAMKLLDEMRDRGCTPDVVTYNVL 280
Query: 180 LDLLCKEKKVEKAYNLFKVF-RGKFKADVISYNVIANGWCLVKRTNKALEVLKEMVDRGL 238
++ +CKE ++++A + +VI++N+I C R A ++L +M+ +G
Sbjct: 281 VNGICKEGRLDEAIKFLNDMPSSGCQPNVITHNIILRSMCSTGRWMDAEKLLADMLRKGF 340
Query: 239 NPNLTTYNIVLKGYFRAGQIEEAWRFFLEMKKRKCEIDVVTYTTIVHGFGVVGEIKRARN 298
+P++ T+NI++ R G + A +M + C+ + ++Y ++HGF ++ RA
Sbjct: 341 SPSVVTFNILINFLCRKGLLGRAIDILEKMPQHGCQPNSLSYNPLLHGFCKEKKMDRAIE 400
Query: 299 VFDGMVNGGVLPSVATYNAMIQVLCKKDSVENAILVFEEMVGKGYMPNSTTYNVVIRGLC 358
+ MV+ G P + TYN M+ LCK VE+A+ + ++ KG P TYN VI GL
Sbjct: 401 YLERMVSRGCYPDIVTYNTMLTALCKDGKVEDAVEILNQLSSKGCSPVLITYNTVIDGLA 460
Query: 359 HTGEMERALEFVGRMKDDECEPNVQTYNILIRYFCDAGEIERGLELF---EKMGSGVCLP 415
G+ +A++ + M+ + +P+ TY+ L+ G+++ ++ F E+MG P
Sbjct: 461 KAGKTGKAIKLLDEMRAKDLKPDTITYSSLVGGLSREGKVDEAIKFFHEFERMG---IRP 517
Query: 416 NLDTYNILISSMFVRKKSDDLLVAGKLLIEMVDRGFMPRKFTFNRVLNGLLLIGNQGLAK 475
N T+N ++ + +++D + L+ M++RG P + ++ ++ GL +G+AK
Sbjct: 518 NAVTFNSIMLGLCKSRQTDRAI---DFLVFMINRGCKPNETSYTILIEGLAY---EGMAK 571
Query: 476 EILRL 480
E L L
Sbjct: 572 EALEL 576
Score = 155 bits (393), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 111/425 (26%), Positives = 191/425 (44%), Gaps = 49/425 (11%)
Query: 101 HSPSSFDHAIDLAARLRDYRTVWTLVHRMKSLSLGPTQKTFAIIAERYVSAGKADRAVKI 160
+ S I L +R R+ + + +++S L + F ++ Y ++
Sbjct: 35 RTSGSISSKIPLGSRKRNRLVLVSAASKVESSGLNGRAQKFETLSSGYSNSNGNGH---- 90
Query: 161 FLSMHEHGCRQSLNSFNTILDLLCKEKKVEKAYNLFK--VFRGKFKADVISYNVIANGWC 218
+ S++ + + S N + ++ + ++E+ + + V+ G D+I + G+C
Sbjct: 91 YSSVNSSFALEDVESNNHLRQMV-RTGELEEGFKFLENMVYHGNV-PDIIPCTTLIRGFC 148
Query: 219 LVKRTNKALEVLKEMVDRGLNPNLTTYNIVLKGYFRAGQIEEAWRFFLEMKKRKCEIDVV 278
+ +T KA ++L+ + G P++ TYN+++ GY +AG+I A M DVV
Sbjct: 149 RLGKTRKAAKILEILEGSGAVPDVITYNVMISGYCKAGEINNALSVLDRM---SVSPDVV 205
Query: 279 TYTTIVHGFGVVGEIKRARNVFDGMVNGGVLPSVATYNAMIQVLCKKDSVENAILVFEEM 338
TY TI+ G++K+A V D M+ P V TY +I+ C+ V +A+ + +EM
Sbjct: 206 TYNTILRSLCDSGKLKQAMEVLDRMLQRDCYPDVITYTILIEATCRDSGVGHAMKLLDEM 265
Query: 339 VGKGYMPNSTTYNVVIRGLCHTGEMERALEFVGRMKDDECEPNVQTYNILIRYFCDAGE- 397
+G P+ TYNV++ G+C G ++ A++F+ M C+PNV T+NI++R C G
Sbjct: 266 RDRGCTPDVVTYNVLVNGICKEGRLDEAIKFLNDMPSSGCQPNVITHNIILRSMCSTGRW 325
Query: 398 ----------------------------------IERGLELFEKMGSGVCLPNLDTYNIL 423
+ R +++ EKM C PN +YN L
Sbjct: 326 MDAEKLLADMLRKGFSPSVVTFNILINFLCRKGLLGRAIDILEKMPQHGCQPNSLSYNPL 385
Query: 424 ISSMFVRKKSDDLLVAGKLLIEMVDRGFMPRKFTFNRVLNGLLLIGNQGLAKEILRLQSR 483
+ KK D + + L MV RG P T+N +L L G A EIL S
Sbjct: 386 LHGFCKEKKMDRAI---EYLERMVSRGCYPDIVTYNTMLTALCKDGKVEDAVEILNQLSS 442
Query: 484 CGRLP 488
G P
Sbjct: 443 KGCSP 447
Score = 145 bits (367), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 81/285 (28%), Positives = 150/285 (52%), Gaps = 1/285 (0%)
Query: 125 LVHRMKSLSLGPTQKTFAIIAERYVSAGKADRAVKIFLSMHEHGCRQSLNSFNTILDLLC 184
++ M S P T II S G+ A K+ M G S+ +FN +++ LC
Sbjct: 296 FLNDMPSSGCQPNVITHNIILRSMCSTGRWMDAEKLLADMLRKGFSPSVVTFNILINFLC 355
Query: 185 KEKKVEKAYNLF-KVFRGKFKADVISYNVIANGWCLVKRTNKALEVLKEMVDRGLNPNLT 243
++ + +A ++ K+ + + + +SYN + +G+C K+ ++A+E L+ MV RG P++
Sbjct: 356 RKGLLGRAIDILEKMPQHGCQPNSLSYNPLLHGFCKEKKMDRAIEYLERMVSRGCYPDIV 415
Query: 244 TYNIVLKGYFRAGQIEEAWRFFLEMKKRKCEIDVVTYTTIVHGFGVVGEIKRARNVFDGM 303
TYN +L + G++E+A ++ + C ++TY T++ G G+ +A + D M
Sbjct: 416 TYNTMLTALCKDGKVEDAVEILNQLSSKGCSPVLITYNTVIDGLAKAGKTGKAIKLLDEM 475
Query: 304 VNGGVLPSVATYNAMIQVLCKKDSVENAILVFEEMVGKGYMPNSTTYNVVIRGLCHTGEM 363
+ P TY++++ L ++ V+ AI F E G PN+ T+N ++ GLC + +
Sbjct: 476 RAKDLKPDTITYSSLVGGLSREGKVDEAIKFFHEFERMGIRPNAVTFNSIMLGLCKSRQT 535
Query: 364 ERALEFVGRMKDDECEPNVQTYNILIRYFCDAGEIERGLELFEKM 408
+RA++F+ M + C+PN +Y ILI G + LEL ++
Sbjct: 536 DRAIDFLVFMINRGCKPNETSYTILIEGLAYEGMAKEALELLNEL 580
Score = 109 bits (272), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 76/295 (25%), Positives = 136/295 (46%), Gaps = 4/295 (1%)
Query: 63 PSLHWTPQLVDQ-IIKRLWNHALKALHFFNILSYHPTYAHSPS--SFDHAIDLAARLRDY 119
PS P ++ II R + + +L+ SPS +F+ I+ R
Sbjct: 301 PSSGCQPNVITHNIILRSMCSTGRWMDAEKLLADMLRKGFSPSVVTFNILINFLCRKGLL 360
Query: 120 RTVWTLVHRMKSLSLGPTQKTFAIIAERYVSAGKADRAVKIFLSMHEHGCRQSLNSFNTI 179
++ +M P ++ + + K DRA++ M GC + ++NT+
Sbjct: 361 GRAIDILEKMPQHGCQPNSLSYNPLLHGFCKEKKMDRAIEYLERMVSRGCYPDIVTYNTM 420
Query: 180 LDLLCKEKKVEKAYNLFKVFRGKFKADV-ISYNVIANGWCLVKRTNKALEVLKEMVDRGL 238
L LCK+ KVE A + K + V I+YN + +G +T KA+++L EM + L
Sbjct: 421 LTALCKDGKVEDAVEILNQLSSKGCSPVLITYNTVIDGLAKAGKTGKAIKLLDEMRAKDL 480
Query: 239 NPNLTTYNIVLKGYFRAGQIEEAWRFFLEMKKRKCEIDVVTYTTIVHGFGVVGEIKRARN 298
P+ TY+ ++ G R G+++EA +FF E ++ + VT+ +I+ G + RA +
Sbjct: 481 KPDTITYSSLVGGLSREGKVDEAIKFFHEFERMGIRPNAVTFNSIMLGLCKSRQTDRAID 540
Query: 299 VFDGMVNGGVLPSVATYNAMIQVLCKKDSVENAILVFEEMVGKGYMPNSTTYNVV 353
M+N G P+ +Y +I+ L + + A+ + E+ KG M S+ V
Sbjct: 541 FLVFMINRGCKPNETSYTILIEGLAYEGMAKEALELLNELCNKGLMKKSSAEQVA 595
>sp|Q9FFE3|PP388_ARATH Pentatricopeptide repeat-containing protein At5g16420,
mitochondrial OS=Arabidopsis thaliana GN=At5g16420 PE=2
SV=1
Length = 535
Score = 181 bits (460), Expect = 8e-45, Method: Compositional matrix adjust.
Identities = 119/427 (27%), Positives = 206/427 (48%), Gaps = 10/427 (2%)
Query: 69 PQLVDQIIKRLWNHALKALHFFNILSYHPTYAHSPSSFDHAIDLAARLRDYRTVWTLVHR 128
P+ + +I + N L F HP + H+ ++ + +R R + V +L+
Sbjct: 49 PKRLVSMITQQQNIDLALQIFLYAGKSHPGFTHNYDTYHSILFKLSRARAFDPVESLMAD 108
Query: 129 MKSLSLGPT---QKTFAIIAERYVSAGKADRAVKIFLSMHEHGCRQSLNSFNTILDLLCK 185
+++ S P + F + Y AG+ + +++IFL + + G ++S+ S NT+L++L +
Sbjct: 109 LRN-SYPPIKCGENLFIDLLRNYGLAGRYESSMRIFLRIPDFGVKRSVRSLNTLLNVLIQ 167
Query: 186 EKKVEKAYNLFKVFRGKF--KADVISYNVIANGWCLVKRTNKALEVLKEMVDRGLNPNLT 243
++ + + +FK + F ++ + N++ C A +VL E+ GL PNL
Sbjct: 168 NQRFDLVHAMFKNSKESFGITPNIFTCNLLVKALCKKNDIESAYKVLDEIPSMGLVPNLV 227
Query: 244 TYNIVLKGYFRAGQIEEAWRFFLEMKKRKCEIDVVTYTTIVHGFGVVGEIKRARNVFDGM 303
TY +L GY G +E A R EM R D TYT ++ G+ +G A V D M
Sbjct: 228 TYTTILGGYVARGDMESAKRVLEEMLDRGWYPDATTYTVLMDGYCKLGRFSEAATVMDDM 287
Query: 304 VNGGVLPSVATYNAMIQVLCKKDSVENAILVFEEMVGKGYMPNSTTYNVVIRGLCHTGEM 363
+ P+ TY MI+ LCK+ A +F+EM+ + +MP+S+ VI LC ++
Sbjct: 288 EKNEIEPNEVTYGVMIRALCKEKKSGEARNMFDEMLERSFMPDSSLCCKVIDALCEDHKV 347
Query: 364 ERALEFVGRMKDDECEPNVQTYNILIRYFCDAGEIERGLELFEKMGSGVCLPNLDTYNIL 423
+ A +M + C P+ + LI + C G + +LF++ G +P+L TYN L
Sbjct: 348 DEACGLWRKMLKNNCMPDNALLSTLIHWLCKEGRVTEARKLFDEFEKG-SIPSLLTYNTL 406
Query: 424 ISSMFVRKKSDDLLVAGKLLIEMVDRGFMPRKFTFNRVLNGLLLIGNQGLAKEILRLQSR 483
I+ M + +L AG+L +M +R P FT+N ++ GL GN +L
Sbjct: 407 IAGMC---EKGELTEAGRLWDDMYERKCKPNAFTYNVLIEGLSKNGNVKEGVRVLEEMLE 463
Query: 484 CGRLPRQ 490
G P +
Sbjct: 464 IGCFPNK 470
Score = 117 bits (293), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 69/288 (23%), Positives = 138/288 (47%), Gaps = 2/288 (0%)
Query: 118 DYRTVWTLVHRMKSLSLGPTQKTFAIIAERYVSAGKADRAVKIFLSMHEHGCRQSLNSFN 177
D + + ++ + S+ L P T+ I YV+ G + A ++ M + G ++
Sbjct: 206 DIESAYKVLDEIPSMGLVPNLVTYTTILGGYVARGDMESAKRVLEEMLDRGWYPDATTYT 265
Query: 178 TILDLLCKEKKVEKAYNLFK-VFRGKFKADVISYNVIANGWCLVKRTNKALEVLKEMVDR 236
++D CK + +A + + + + + + ++Y V+ C K++ +A + EM++R
Sbjct: 266 VLMDGYCKLGRFSEAATVMDDMEKNEIEPNEVTYGVMIRALCKEKKSGEARNMFDEMLER 325
Query: 237 GLNPNLTTYNIVLKGYFRAGQIEEAWRFFLEMKKRKCEIDVVTYTTIVHGFGVVGEIKRA 296
P+ + V+ +++EA + +M K C D +T++H G + A
Sbjct: 326 SFMPDSSLCCKVIDALCEDHKVDEACGLWRKMLKNNCMPDNALLSTLIHWLCKEGRVTEA 385
Query: 297 RNVFDGMVNGGVLPSVATYNAMIQVLCKKDSVENAILVFEEMVGKGYMPNSTTYNVVIRG 356
R +FD G + PS+ TYN +I +C+K + A ++++M + PN+ TYNV+I G
Sbjct: 386 RKLFDEFEKGSI-PSLLTYNTLIAGMCEKGELTEAGRLWDDMYERKCKPNAFTYNVLIEG 444
Query: 357 LCHTGEMERALEFVGRMKDDECEPNVQTYNILIRYFCDAGEIERGLEL 404
L G ++ + + M + C PN T+ IL G+ E +++
Sbjct: 445 LSKNGNVKEGVRVLEEMLEIGCFPNKTTFLILFEGLQKLGKEEDAMKI 492
Score = 101 bits (252), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 71/316 (22%), Positives = 147/316 (46%), Gaps = 7/316 (2%)
Query: 90 FNILSYHPTYAHSPSSFDHAIDLAARLR--DYRTVWTLVHRMKSLSLGPTQKTFAIIAER 147
+ +L P+ P+ + L + D + ++ M P T+ ++ +
Sbjct: 211 YKVLDEIPSMGLVPNLVTYTTILGGYVARGDMESAKRVLEEMLDRGWYPDATTYTVLMDG 270
Query: 148 YVSAGKADRAVKIFLSMHEHGCRQSLNSFNTILDLLCKEKKVEKAYNLF-KVFRGKFKAD 206
Y G+ A + M ++ + ++ ++ LCKEKK +A N+F ++ F D
Sbjct: 271 YCKLGRFSEAATVMDDMEKNEIEPNEVTYGVMIRALCKEKKSGEARNMFDEMLERSFMPD 330
Query: 207 VISYNVIANGWCLVKRTNKALEVLKEMVDRGLNPNLTTYNIVLKGYFRAGQIEEAWRFFL 266
+ + C + ++A + ++M+ P+ + ++ + G++ EA + F
Sbjct: 331 SSLCCKVIDALCEDHKVDEACGLWRKMLKNNCMPDNALLSTLIHWLCKEGRVTEARKLFD 390
Query: 267 EMKKRKCEIDVVTYTTIVHGFGVVGEIKRARNVFDGMVNGGVLPSVATYNAMIQVLCKKD 326
E +K ++TY T++ G GE+ A ++D M P+ TYN +I+ L K
Sbjct: 391 EFEKGSIP-SLLTYNTLIAGMCEKGELTEAGRLWDDMYERKCKPNAFTYNVLIEGLSKNG 449
Query: 327 SVENAILVFEEMVGKGYMPNSTTYNVVIRGLCHTGEMERALEFVGRMKDDECEPNVQTYN 386
+V+ + V EEM+ G PN TT+ ++ GL G+ E A++ V M + + +++
Sbjct: 450 NVKEGVRVLEEMLEIGCFPNKTTFLILFEGLQKLGKEEDAMKIVS-MAVMNGKVDKESWE 508
Query: 387 ILIRYFCDAGEIERGL 402
+ ++ F AGE+++G+
Sbjct: 509 LFLKKF--AGELDKGV 522
>sp|Q9CAN6|PPR97_ARATH Pentatricopeptide repeat-containing protein At1g63070,
mitochondrial OS=Arabidopsis thaliana GN=At1g63070 PE=1
SV=1
Length = 590
Score = 181 bits (460), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 108/364 (29%), Positives = 186/364 (51%), Gaps = 5/364 (1%)
Query: 124 TLVHRMKSLSLGPTQKTFAIIAERYVSAGKADRAVKIFLSMHEHGCRQSLNSFNTILDLL 183
LV RM P T+ + G+ D A+ + M + + +NTI+D L
Sbjct: 201 ALVERMVVKGCQPDLVTYGAVINGLCKRGEPDLALNLLNKMEKGKIEADVVIYNTIIDGL 260
Query: 184 CKEKKVEKAYNLFKVFRGK-FKADVISYNVIANGWCLVKRTNKALEVLKEMVDRGLNPNL 242
CK K ++ A++LF K K DV +YN + + C R + A +L +M+++ +NP+L
Sbjct: 261 CKYKHMDDAFDLFNKMETKGIKPDVFTYNPLISCLCNYGRWSDASRLLSDMLEKNINPDL 320
Query: 243 TTYNIVLKGYFRAGQIEEAWRFFLEMKKRK-CEIDVVTYTTIVHGFGVVGEIKRARNVFD 301
+N ++ + + G++ EA + + EM K K C DVV Y T++ GF ++ VF
Sbjct: 321 VFFNALIDAFVKEGKLVEAEKLYDEMVKSKHCFPDVVAYNTLIKGFCKYKRVEEGMEVFR 380
Query: 302 GMVNGGVLPSVATYNAMIQVLCKKDSVENAILVFEEMVGKGYMPNSTTYNVVIRGLCHTG 361
M G++ + TY +I + +NA +VF++MV G P+ TYN+++ GLC+ G
Sbjct: 381 EMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSDGVHPDIMTYNILLDGLCNNG 440
Query: 362 EMERALEFVGRMKDDECEPNVQTYNILIRYFCDAGEIERGLELFEKMGSGVCLPNLDTYN 421
+E AL M+ + + ++ TY +I C AG++E G +LF + PN+ TY
Sbjct: 441 NVETALVVFEYMQKRDMKLDIVTYTTMIEALCKAGKVEDGWDLFCSLSLKGVKPNVVTYT 500
Query: 422 ILISSMFVRKKSDDLLVAGKLLIEMVDRGFMPRKFTFNRVLNGLLLIGNQGLAKEILRLQ 481
++S F RK + A L +EM + G +P T+N ++ L G++ + E+++
Sbjct: 501 TMMSG-FCRKGLKE--EADALFVEMKEDGPLPNSGTYNTLIRARLRDGDEAASAELIKEM 557
Query: 482 SRCG 485
CG
Sbjct: 558 RSCG 561
Score = 140 bits (353), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 94/372 (25%), Positives = 163/372 (43%), Gaps = 40/372 (10%)
Query: 136 PTQKTFAIIAERYVSAGKADRAVKIFLSMHEHGCRQSLNSFNTILDLLCKEKKVEKAYNL 195
P+ F+ + K D + + M G +L +++ ++ C+ ++ A +
Sbjct: 73 PSIVEFSKLLSAIAKMNKFDLVISLGEQMQNLGISHNLYTYSIFINYFCRRSQLSLALAI 132
Query: 196 F-KVFRGKFKADVISYNVIANGWCLVKRTNKALEVLKEMVDRGLNPNLTTYNIVLKGYFR 254
K+ + + +++ N + NG+C R ++A+ ++ +MV+ G P+ T+ ++ G F+
Sbjct: 133 LGKMMKLGYGPSIVTLNSLLNGFCHGNRISEAVALVDQMVEMGYQPDTVTFTTLVHGLFQ 192
Query: 255 AGQIEEAWRFFLEMKKRKCEIDVVTYTTIVHGFGVVGEIKRARNVFDGMVNGGVLPSVAT 314
+ EA M + C+ D+VTY +++G GE A N+ + M G + V
Sbjct: 193 HNKASEAVALVERMVVKGCQPDLVTYGAVINGLCKRGEPDLALNLLNKMEKGKIEADVVI 252
Query: 315 YNAMIQVLCKKDSVENAILVFEEMVGKGYMPNSTTYNVVIRGLCHTGEMERALEFVGRM- 373
YN +I LCK +++A +F +M KG P+ TYN +I LC+ G A + M
Sbjct: 253 YNTIIDGLCKYKHMDDAFDLFNKMETKGIKPDVFTYNPLISCLCNYGRWSDASRLLSDML 312
Query: 374 -----------------------------------KDDECEPNVQTYNILIRYFCDAGEI 398
K C P+V YN LI+ FC +
Sbjct: 313 EKNINPDLVFFNALIDAFVKEGKLVEAEKLYDEMVKSKHCFPDVVAYNTLIKGFCKYKRV 372
Query: 399 ERGLELFEKMGSGVCLPNLDTYNILISSMFVRKKSDDLLVAGKLLIEMVDRGFMPRKFTF 458
E G+E+F +M + N TY LI F + D+ A + +MV G P T+
Sbjct: 373 EEGMEVFREMSQRGLVGNTVTYTTLIHGFFQARDCDN---AQMVFKQMVSDGVHPDIMTY 429
Query: 459 NRVLNGLLLIGN 470
N +L+GL GN
Sbjct: 430 NILLDGLCNNGN 441
Score = 139 bits (351), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 90/307 (29%), Positives = 146/307 (47%), Gaps = 2/307 (0%)
Query: 106 FDHAIDLAARLRDYRTVWTLVHRMKSLSLGPTQKTFAIIAERYVSAGKADRAVKIFLSMH 165
++ ID + + + L ++M++ + P T+ + + G+ A ++ M
Sbjct: 253 YNTIIDGLCKYKHMDDAFDLFNKMETKGIKPDVFTYNPLISCLCNYGRWSDASRLLSDML 312
Query: 166 EHGCRQSLNSFNTILDLLCKEKKVEKAYNLF-KVFRGKFK-ADVISYNVIANGWCLVKRT 223
E L FN ++D KE K+ +A L+ ++ + K DV++YN + G+C KR
Sbjct: 313 EKNINPDLVFFNALIDAFVKEGKLVEAEKLYDEMVKSKHCFPDVVAYNTLIKGFCKYKRV 372
Query: 224 NKALEVLKEMVDRGLNPNLTTYNIVLKGYFRAGQIEEAWRFFLEMKKRKCEIDVVTYTTI 283
+ +EV +EM RGL N TY ++ G+F+A + A F +M D++TY +
Sbjct: 373 EEGMEVFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSDGVHPDIMTYNIL 432
Query: 284 VHGFGVVGEIKRARNVFDGMVNGGVLPSVATYNAMIQVLCKKDSVENAILVFEEMVGKGY 343
+ G G ++ A VF+ M + + TY MI+ LCK VE+ +F + KG
Sbjct: 433 LDGLCNNGNVETALVVFEYMQKRDMKLDIVTYTTMIEALCKAGKVEDGWDLFCSLSLKGV 492
Query: 344 MPNSTTYNVVIRGLCHTGEMERALEFVGRMKDDECEPNVQTYNILIRYFCDAGEIERGLE 403
PN TY ++ G C G E A MK+D PN TYN LIR G+ E
Sbjct: 493 KPNVVTYTTMMSGFCRKGLKEEADALFVEMKEDGPLPNSGTYNTLIRARLRDGDEAASAE 552
Query: 404 LFEKMGS 410
L ++M S
Sbjct: 553 LIKEMRS 559
Score = 132 bits (331), Expect = 7e-30, Method: Compositional matrix adjust.
Identities = 87/329 (26%), Positives = 153/329 (46%), Gaps = 9/329 (2%)
Query: 71 LVDQIIKRLWNHALKALHFFNILSYHPTYAHSPSSFDHA--IDLAARLRDYRTVWTLVHR 128
++D + K + H A FN + T P F + I + L+
Sbjct: 256 IIDGLCK--YKHMDDAFDLFNKME---TKGIKPDVFTYNPLISCLCNYGRWSDASRLLSD 310
Query: 129 MKSLSLGPTQKTFAIIAERYVSAGKADRAVKIFLSM-HEHGCRQSLNSFNTILDLLCKEK 187
M ++ P F + + +V GK A K++ M C + ++NT++ CK K
Sbjct: 311 MLEKNINPDLVFFNALIDAFVKEGKLVEAEKLYDEMVKSKHCFPDVVAYNTLIKGFCKYK 370
Query: 188 KVEKAYNLFKVFRGK-FKADVISYNVIANGWCLVKRTNKALEVLKEMVDRGLNPNLTTYN 246
+VE+ +F+ + + ++Y + +G+ + + A V K+MV G++P++ TYN
Sbjct: 371 RVEEGMEVFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSDGVHPDIMTYN 430
Query: 247 IVLKGYFRAGQIEEAWRFFLEMKKRKCEIDVVTYTTIVHGFGVVGEIKRARNVFDGMVNG 306
I+L G G +E A F M+KR ++D+VTYTT++ G+++ ++F +
Sbjct: 431 ILLDGLCNNGNVETALVVFEYMQKRDMKLDIVTYTTMIEALCKAGKVEDGWDLFCSLSLK 490
Query: 307 GVLPSVATYNAMIQVLCKKDSVENAILVFEEMVGKGYMPNSTTYNVVIRGLCHTGEMERA 366
GV P+V TY M+ C+K E A +F EM G +PNS TYN +IR G+ +
Sbjct: 491 GVKPNVVTYTTMMSGFCRKGLKEEADALFVEMKEDGPLPNSGTYNTLIRARLRDGDEAAS 550
Query: 367 LEFVGRMKDDECEPNVQTYNILIRYFCDA 395
E + M+ + T+ ++ D
Sbjct: 551 AELIKEMRSCGFAGDASTFGLVTNMLHDG 579
Score = 94.4 bits (233), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 61/257 (23%), Positives = 118/257 (45%), Gaps = 3/257 (1%)
Query: 222 RTNKALEVLKEMVDRGLNPNLTTYNIVLKGYFRAGQIEEAWRFFLEMKKRKCEIDVVTYT 281
+ + A+ + +MV P++ ++ +L + + + +M+ ++ TY+
Sbjct: 55 KLDDAIGLFGDMVKSRPFPSIVEFSKLLSAIAKMNKFDLVISLGEQMQNLGISHNLYTYS 114
Query: 282 TIVHGFGVVGEIKRARNVFDGMVNGGVLPSVATYNAMIQVLCKKDSVENAILVFEEMVGK 341
++ F ++ A + M+ G PS+ T N+++ C + + A+ + ++MV
Sbjct: 115 IFINYFCRRSQLSLALAILGKMMKLGYGPSIVTLNSLLNGFCHGNRISEAVALVDQMVEM 174
Query: 342 GYMPNSTTYNVVIRGLCHTGEMERALEFVGRMKDDECEPNVQTYNILIRYFCDAGEIERG 401
GY P++ T+ ++ GL + A+ V RM C+P++ TY +I C GE +
Sbjct: 175 GYQPDTVTFTTLVHGLFQHNKASEAVALVERMVVKGCQPDLVTYGAVINGLCKRGEPDLA 234
Query: 402 LELFEKMGSGVCLPNLDTYNILISSMFVRKKSDDLLVAGKLLIEMVDRGFMPRKFTFNRV 461
L L KM G ++ YN +I + K DD A L +M +G P FT+N +
Sbjct: 235 LNLLNKMEKGKIEADVVIYNTIIDGLCKYKHMDD---AFDLFNKMETKGIKPDVFTYNPL 291
Query: 462 LNGLLLIGNQGLAKEIL 478
++ L G A +L
Sbjct: 292 ISCLCNYGRWSDASRLL 308
>sp|Q9FZ19|PPR5_ARATH Putative pentatricopeptide repeat-containing protein At1g02420
OS=Arabidopsis thaliana GN=At1g02420 PE=3 SV=2
Length = 491
Score = 181 bits (459), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 122/448 (27%), Positives = 223/448 (49%), Gaps = 27/448 (6%)
Query: 27 TTSPAPLPPAAADPAALASLILTSTDPRTLTQTLHCPSLHWTPQLVDQIIKRL-WNHA-- 83
+ + P+ D + +I S L ++L +H + L+D+++KR+ ++H
Sbjct: 29 SDAKVPVEEEGDDAETVFRMINGSNLQVELKESLSSSGIHLSKDLIDRVLKRVRFSHGNP 88
Query: 84 LKALHFFNILSYHPTYAHSPSSFDHAIDLAARLRDYRTVWTLV--HRMKSLSLGPTQKTF 141
++ L F+ S + HS S D + + R R + +W L+ + K SL + +T
Sbjct: 89 IQTLEFYRYASAIRGFYHSSFSLDTMLYILGRNRKFDQIWELLIETKRKDRSL-ISPRTM 147
Query: 142 AIIAERYVSAGKADRAVKIFLSMH-------EHGCRQSLNSFNTILDLLCKEKKVEKAYN 194
++ R + V+ F + C FN +L LC+EK + A N
Sbjct: 148 QVVLGRVAKLCSVRQTVESFWKFKRLVPDFFDTAC------FNALLRTLCQEKSMTDARN 201
Query: 195 LFKVFRGKFKADVISYNVIANGWCLVKRTNKALEVLKEMVDRGLNPNLTTYNIVLKGYFR 254
++ + +F+ D+ ++N++ +GW K + +A +EM +GL P++ TYN ++ Y +
Sbjct: 202 VYHSLKHQFQPDLQTFNILLSGW---KSSEEAEAFFEEMKGKGLKPDVVTYNSLIDVYCK 258
Query: 255 AGQIEEAWRFFLEMKKRKCEIDVVTYTTIVHGFGVVGEIKRARNVFDGMVNGGVLPSVAT 314
+IE+A++ +M++ + DV+TYTT++ G G++G+ +AR V M G P VA
Sbjct: 259 DREIEKAYKLIDKMREEEETPDVITYTTVIGGLGLIGQPDKAREVLKEMKEYGCYPDVAA 318
Query: 315 YNAMIQVLCKKDSVENAILVFEEMVGKGYMPNSTTYNVVIRGLCHTGEMERALEFVGRMK 374
YNA I+ C + +A + +EMV KG PN+TTYN+ R L ++ R+ E RM
Sbjct: 319 YNAAIRNFCIARRLGDADKLVDEMVKKGLSPNATTYNLFFRVLSLANDLGRSWELYVRML 378
Query: 375 DDECEPNVQTYNILIRYFCDAGEIERGLELFEKMGSGVCLPNLDTYNILISSMFVRKKSD 434
+EC PN Q+ LI+ F +++ + L+E M + +Y+++ +
Sbjct: 379 GNECLPNTQSCMFLIKMFKRHEKVDMAMRLWEDM----VVKGFGSYSLVSDVLLDLLCDL 434
Query: 435 -DLLVAGKLLIEMVDRGFMPRKFTFNRV 461
+ A K L+EMV++G P +F R+
Sbjct: 435 AKVEEAEKCLLEMVEKGHRPSNVSFKRI 462
Score = 78.6 bits (192), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 60/259 (23%), Positives = 115/259 (44%), Gaps = 40/259 (15%)
Query: 254 RAGQIEEAWRFFLEMKKRKCEIDVVTYTTIVHGFGVVGEIKRARNVFDGMVN-GGVLPS- 311
R + ++ W +E K++ + +++ T+ G V ++ R + ++P
Sbjct: 120 RNRKFDQIWELLIETKRK--DRSLISPRTMQVVLGRVAKLCSVRQTVESFWKFKRLVPDF 177
Query: 312 --VATYNAMIQVLCKKDSVENAILVFEE-------------------------------M 338
A +NA+++ LC++ S+ +A V+ M
Sbjct: 178 FDTACFNALLRTLCQEKSMTDARNVYHSLKHQFQPDLQTFNILLSGWKSSEEAEAFFEEM 237
Query: 339 VGKGYMPNSTTYNVVIRGLCHTGEMERALEFVGRMKDDECEPNVQTYNILIRYFCDAGEI 398
GKG P+ TYN +I C E+E+A + + +M+++E P+V TY +I G+
Sbjct: 238 KGKGLKPDVVTYNSLIDVYCKDREIEKAYKLIDKMREEEETPDVITYTTVIGGLGLIGQP 297
Query: 399 ERGLELFEKMGSGVCLPNLDTYNILISSMFVRKKSDDLLVAGKLLIEMVDRGFMPRKFTF 458
++ E+ ++M C P++ YN I + + ++ D A KL+ EMV +G P T+
Sbjct: 298 DKAREVLKEMKEYGCYPDVAAYNAAIRNFCIARRLGD---ADKLVDEMVKKGLSPNATTY 354
Query: 459 NRVLNGLLLIGNQGLAKEI 477
N L L + G + E+
Sbjct: 355 NLFFRVLSLANDLGRSWEL 373
>sp|Q9FMD3|PP389_ARATH Pentatricopeptide repeat-containing protein At5g16640,
mitochondrial OS=Arabidopsis thaliana GN=At5g16640 PE=2
SV=1
Length = 504
Score = 181 bits (458), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 109/391 (27%), Positives = 197/391 (50%), Gaps = 4/391 (1%)
Query: 101 HSPSSFDHAIDLAARLRDYRTVWTLVHRMKSLSLGPTQKTFAIIAERYVSAGKADRAVKI 160
H+ + + ++ R + + +M L P+ TF + + + A+ +
Sbjct: 114 HNLCTCNILLNCFCRCSQLSLALSFLGKMIKLGHEPSIVTFGSLLNGFCRGDRVYDALYM 173
Query: 161 FLSMHEHGCRQSLNSFNTILDLLCKEKKVEKAYNLF-KVFRGKFKADVISYNVIANGWCL 219
F M G + ++ +NTI+D LCK K+V+ A +L ++ + DV++YN + +G C
Sbjct: 174 FDQMVGMGYKPNVVIYNTIIDGLCKSKQVDNALDLLNRMEKDGIGPDVVTYNSLISGLCS 233
Query: 220 VKRTNKALEVLKEMVDRGLNPNLTTYNIVLKGYFRAGQIEEAWRFFLEMKKRKCEIDVVT 279
R + A ++ M R + P++ T+N ++ + G++ EA F+ EM +R + D+VT
Sbjct: 234 SGRWSDATRMVSCMTKREIYPDVFTFNALIDACVKEGRVSEAEEFYEEMIRRSLDPDIVT 293
Query: 280 YTTIVHGFGVVGEIKRARNVFDGMVNGGVLPSVATYNAMIQVLCKKDSVENAILVFEEMV 339
Y+ +++G + + A +F MV+ G P V TY+ +I CK VE+ + +F EM
Sbjct: 294 YSLLIYGLCMYSRLDEAEEMFGFMVSKGCFPDVVTYSILINGYCKSKKVEHGMKLFCEMS 353
Query: 340 GKGYMPNSTTYNVVIRGLCHTGEMERALEFVGRMKDDECEPNVQTYNILIRYFCDAGEIE 399
+G + N+ TY ++I+G C G++ A E RM PN+ TYN+L+ CD G+IE
Sbjct: 354 QRGVVRNTVTYTILIQGYCRAGKLNVAEEIFRRMVFCGVHPNIITYNVLLHGLCDNGKIE 413
Query: 400 RGLELFEKMGSGVCLPNLDTYNILISSMFVRKKSDDLLVAGKLLIEMVDRGFMPRKFTFN 459
+ L + M ++ TYNI+I M K+ ++ A + + +G MP +T+
Sbjct: 414 KALVILADMQKNGMDADIVTYNIIIRGMC---KAGEVADAWDIYCSLNCQGLMPDIWTYT 470
Query: 460 RVLNGLLLIGNQGLAKEILRLQSRCGRLPRQ 490
++ GL G + A + R G LP +
Sbjct: 471 TMMLGLYKKGLRREADALFRKMKEDGILPNE 501
Score = 149 bits (377), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 95/331 (28%), Positives = 162/331 (48%), Gaps = 4/331 (1%)
Query: 136 PTQKTFAIIAERYVSAGKADRAVKIFLSMHEHGCRQSLNSFNTILDLLCKEKKVEKAYN- 194
P+ F+ + K D + ++ M G +L + N +L+ C+ ++ A +
Sbjct: 79 PSIADFSRLLSAISKMKKYDVVIYLWEQMQMLGIPHNLCTCNILLNCFCRCSQLSLALSF 138
Query: 195 LFKVFRGKFKADVISYNVIANGWCLVKRTNKALEVLKEMVDRGLNPNLTTYNIVLKGYFR 254
L K+ + + ++++ + NG+C R AL + +MV G PN+ YN ++ G +
Sbjct: 139 LGKMIKLGHEPSIVTFGSLLNGFCRGDRVYDALYMFDQMVGMGYKPNVVIYNTIIDGLCK 198
Query: 255 AGQIEEAWRFFLEMKKRKCEIDVVTYTTIVHGFGVVGEIKRARNVFDGMVNGGVLPSVAT 314
+ Q++ A M+K DVVTY +++ G G A + M + P V T
Sbjct: 199 SKQVDNALDLLNRMEKDGIGPDVVTYNSLISGLCSSGRWSDATRMVSCMTKREIYPDVFT 258
Query: 315 YNAMIQVLCKKDSVENAILVFEEMVGKGYMPNSTTYNVVIRGLCHTGEMERALEFVGRMK 374
+NA+I K+ V A +EEM+ + P+ TY+++I GLC ++ A E G M
Sbjct: 259 FNALIDACVKEGRVSEAEEFYEEMIRRSLDPDIVTYSLLIYGLCMYSRLDEAEEMFGFMV 318
Query: 375 DDECEPNVQTYNILIRYFCDAGEIERGLELFEKMGSGVCLPNLDTYNILISSMFVRKKSD 434
C P+V TY+ILI +C + ++E G++LF +M + N TY ILI ++
Sbjct: 319 SKGCFPDVVTYSILINGYCKSKKVEHGMKLFCEMSQRGVVRNTVTYTILIQGYC---RAG 375
Query: 435 DLLVAGKLLIEMVDRGFMPRKFTFNRVLNGL 465
L VA ++ MV G P T+N +L+GL
Sbjct: 376 KLNVAEEIFRRMVFCGVHPNIITYNVLLHGL 406
Score = 102 bits (254), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 64/267 (23%), Positives = 126/267 (47%), Gaps = 3/267 (1%)
Query: 222 RTNKALEVLKEMVDRGLNPNLTTYNIVLKGYFRAGQIEEAWRFFLEMKKRKCEIDVVTYT 281
+ + +L++ MV P++ ++ +L + + + + +M+ ++ T
Sbjct: 61 KLDDSLDLFFHMVQCRPLPSIADFSRLLSAISKMKKYDVVIYLWEQMQMLGIPHNLCTCN 120
Query: 282 TIVHGFGVVGEIKRARNVFDGMVNGGVLPSVATYNAMIQVLCKKDSVENAILVFEEMVGK 341
+++ F ++ A + M+ G PS+ T+ +++ C+ D V +A+ +F++MVG
Sbjct: 121 ILLNCFCRCSQLSLALSFLGKMIKLGHEPSIVTFGSLLNGFCRGDRVYDALYMFDQMVGM 180
Query: 342 GYMPNSTTYNVVIRGLCHTGEMERALEFVGRMKDDECEPNVQTYNILIRYFCDAGEIERG 401
GY PN YN +I GLC + +++ AL+ + RM+ D P+V TYN LI C +G
Sbjct: 181 GYKPNVVIYNTIIDGLCKSKQVDNALDLLNRMEKDGIGPDVVTYNSLISGLCSSGRWSDA 240
Query: 402 LELFEKMGSGVCLPNLDTYNILISSMFVRKKSDDLLVAGKLLIEMVDRGFMPRKFTFNRV 461
+ M P++ T+N LI + + + A + EM+ R P T++ +
Sbjct: 241 TRMVSCMTKREIYPDVFTFNALIDACVKEGRVSE---AEEFYEEMIRRSLDPDIVTYSLL 297
Query: 462 LNGLLLIGNQGLAKEILRLQSRCGRLP 488
+ GL + A+E+ G P
Sbjct: 298 IYGLCMYSRLDEAEEMFGFMVSKGCFP 324
>sp|Q9LZP3|PP293_ARATH Pentatricopeptide repeat-containing protein At3g62470,
mitochondrial OS=Arabidopsis thaliana GN=At3g62470 PE=2
SV=1
Length = 599
Score = 179 bits (455), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 106/408 (25%), Positives = 212/408 (51%), Gaps = 6/408 (1%)
Query: 54 RTLTQTLHCPSLHWTPQLVDQIIKRLWNHALKALHFFNILSYHPTYAHSPSSFDHAIDLA 113
R + L L + L+ ++++R + A FF + +AH +++ + +
Sbjct: 146 RNMEAVLDEMKLDLSHDLIVEVLERFRHARKPAFRFFCWAAERQGFAHDSRTYNSMMSIL 205
Query: 114 ARLRDYRTVWTLVHRMKSLSLGPTQKTFAIIAERYVSAGKADRAVKIFLSMHEHGCRQSL 173
A+ R + T+ +++ M + L T +TF I + + +A + +AV IF M ++ + +
Sbjct: 206 AKTRQFETMVSVLEEMGTKGL-LTMETFTIAMKAFAAAKERKKAVGIFELMKKYKFKIGV 264
Query: 174 NSFNTILDLLCKEKKVEKAYNLFKVFRGKFKADVISYNVIANGWCLVKRTNKALEVLKEM 233
+ N +LD L + K ++A LF + +F ++++Y V+ NGWC V+ +A + +M
Sbjct: 265 ETINCLLDSLGRAKLGKEAQVLFDKLKERFTPNMMTYTVLLNGWCRVRNLIEAARIWNDM 324
Query: 234 VDRGLNPNLTTYNIVLKGYFRAGQIEEAWRFFLEMKKRKCEIDVVTYTTIVHGFGVVGEI 293
+D+GL P++ +N++L+G R+ + +A + F MK + +V +YT ++ F +
Sbjct: 325 IDQGLKPDIVAHNVMLEGLLRSRKKSDAIKLFHVMKSKGPCPNVRSYTIMIRDFCKQSSM 384
Query: 294 KRARNVFDGMVNGGVLPSVATYNAMIQVLCKKDSVENAILVFEEMVGKGYMPNSTTYNVV 353
+ A FD MV+ G+ P A Y +I + ++ + +EM KG+ P+ TYN +
Sbjct: 385 ETAIEYFDDMVDSGLQPDAAVYTCLITGFGTQKKLDTVYELLKEMQEKGHPPDGKTYNAL 444
Query: 354 IRGLCHTGEMERALEFVGRMKDDECEPNVQTYNILIRYFCDAGEIERGLELFEKM-GSGV 412
I+ + + E A +M +E EP++ T+N++++ + A E G ++E+M G+
Sbjct: 445 IKLMANQKMPEHATRIYNKMIQNEIEPSIHTFNMIMKSYFMARNYEMGRAVWEEMIKKGI 504
Query: 413 CLPNLDTYNILISSMFVRKKSDDLLVAGKLLIEMVDRGFMPRKFTFNR 460
C P+ ++Y +LI + KS + A + L EM+D+G +N+
Sbjct: 505 C-PDDNSYTVLIRGLIGEGKSRE---ACRYLEEMLDKGMKTPLIDYNK 548
Score = 80.1 bits (196), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 61/261 (23%), Positives = 110/261 (42%), Gaps = 1/261 (0%)
Query: 115 RLRDYRTVWTLVHRMKSLSLGPTQKTFAIIAERYVSAGKADRAVKIFLSMHEHGCRQSLN 174
R+R+ + + M L P ++ E + + K A+K+F M G ++
Sbjct: 310 RVRNLIEAARIWNDMIDQGLKPDIVAHNVMLEGLLRSRKKSDAIKLFHVMKSKGPCPNVR 369
Query: 175 SFNTILDLLCKEKKVEKAYNLFK-VFRGKFKADVISYNVIANGWCLVKRTNKALEVLKEM 233
S+ ++ CK+ +E A F + + D Y + G+ K+ + E+LKEM
Sbjct: 370 SYTIMIRDFCKQSSMETAIEYFDDMVDSGLQPDAAVYTCLITGFGTQKKLDTVYELLKEM 429
Query: 234 VDRGLNPNLTTYNIVLKGYFRAGQIEEAWRFFLEMKKRKCEIDVVTYTTIVHGFGVVGEI 293
++G P+ TYN ++K E A R + +M + + E + T+ I+ + +
Sbjct: 430 QEKGHPPDGKTYNALIKLMANQKMPEHATRIYNKMIQNEIEPSIHTFNMIMKSYFMARNY 489
Query: 294 KRARNVFDGMVNGGVLPSVATYNAMIQVLCKKDSVENAILVFEEMVGKGYMPNSTTYNVV 353
+ R V++ M+ G+ P +Y +I+ L + A EEM+ KG YN
Sbjct: 490 EMGRAVWEEMIKKGICPDDNSYTVLIRGLIGEGKSREACRYLEEMLDKGMKTPLIDYNKF 549
Query: 354 IRGLCHTGEMERALEFVGRMK 374
G+ E E R K
Sbjct: 550 AADFHRGGQPEIFEELAQRAK 570
Score = 57.8 bits (138), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 46/175 (26%), Positives = 83/175 (47%), Gaps = 5/175 (2%)
Query: 314 TYNAMIQVLCKKDSVENAILVFEEMVGKGYMPNSTTYNVVIRGLCHTGEMERALEFVGRM 373
TYN+M+ +L K E + V EEM KG + T+ + ++ E ++A+ M
Sbjct: 197 TYNSMMSILAKTRQFETMVSVLEEMGTKGLL-TMETFTIAMKAFAAAKERKKAVGIFELM 255
Query: 374 KDDECEPNVQTYNILIRYFCDAGEIERGLELFEKMGSGVCLPNLDTYNILISSMFVRKKS 433
K + + V+T N L+ A + LF+K+ PN+ TY +L++ + R +
Sbjct: 256 KKYKFKIGVETINCLLDSLGRAKLGKEAQVLFDKLKERFT-PNMMTYTVLLNG-WCRVR- 312
Query: 434 DDLLVAGKLLIEMVDRGFMPRKFTFNRVLNGLLLIGNQGLAKEILRLQSRCGRLP 488
+L+ A ++ +M+D+G P N +L GLL + A ++ + G P
Sbjct: 313 -NLIEAARIWNDMIDQGLKPDIVAHNVMLEGLLRSRKKSDAIKLFHVMKSKGPCP 366
>sp|Q9SH26|PP102_ARATH Pentatricopeptide repeat-containing protein At1g63400
OS=Arabidopsis thaliana GN=At1g63400 PE=2 SV=1
Length = 577
Score = 179 bits (455), Expect = 4e-44, Method: Compositional matrix adjust.
Identities = 100/366 (27%), Positives = 182/366 (49%), Gaps = 4/366 (1%)
Query: 124 TLVHRMKSLSLGPTQKTFAIIAERYVSAGKADRAVKIFLSMHEHGCRQSLNSFNTILDLL 183
LV RM P T+ ++ G D A + M ++ ++T++D L
Sbjct: 211 ALVDRMVQRGCQPNLVTYGVVVNGLCKRGDIDLAFNLLNKMEAAKIEANVVIYSTVIDSL 270
Query: 184 CKEKKVEKAYNLFKVFRGK-FKADVISYNVIANGWCLVKRTNKALEVLKEMVDRGLNPNL 242
CK + + A NLF K + +VI+Y+ + + C +R + A +L +M++R +NPN+
Sbjct: 271 CKYRHEDDALNLFTEMENKGVRPNVITYSSLISCLCNYERWSDASRLLSDMIERKINPNV 330
Query: 243 TTYNIVLKGYFRAGQIEEAWRFFLEMKKRKCEIDVVTYTTIVHGFGVVGEIKRARNVFDG 302
T+N ++ + + G++ EA + + EM KR + D+ TY+++++GF + + A+++F+
Sbjct: 331 VTFNALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFEL 390
Query: 303 MVNGGVLPSVATYNAMIQVLCKKDSVENAILVFEEMVGKGYMPNSTTYNVVIRGLCHTGE 362
M++ P+V TYN +I CK ++ + +F EM +G + N+ TY +I G +
Sbjct: 391 MISKDCFPNVVTYNTLINGFCKAKRIDEGVELFREMSQRGLVGNTVTYTTLIHGFFQARD 450
Query: 363 MERALEFVGRMKDDECEPNVQTYNILIRYFCDAGEIERGLELFEKMGSGVCLPNLDTYNI 422
+ A +M D PN+ TYN L+ C G++E+ + +FE + P + TYNI
Sbjct: 451 CDNAQMVFKQMVSDGVHPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPTIYTYNI 510
Query: 423 LISSMFVRKKSDDLLVAGKLLIEMVDRGFMPRKFTFNRVLNGLLLIGNQGLAKEILRLQS 482
+I M K +D L + +G P +N +++G G + A + R
Sbjct: 511 MIEGMCKAGKVED---GWDLFCSLSLKGVKPDVIIYNTMISGFCRKGLKEEADALFRKMR 567
Query: 483 RCGRLP 488
G LP
Sbjct: 568 EDGPLP 573
Score = 160 bits (404), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 91/315 (28%), Positives = 159/315 (50%), Gaps = 1/315 (0%)
Query: 106 FDHAIDLAARLRDYRTVWTLVHRMKSLSLGPTQKTFAIIAERYVSAGKADRAVKIFLSMH 165
+ ID + R L M++ + P T++ + + + A ++ M
Sbjct: 263 YSTVIDSLCKYRHEDDALNLFTEMENKGVRPNVITYSSLISCLCNYERWSDASRLLSDMI 322
Query: 166 EHGCRQSLNSFNTILDLLCKEKKVEKAYNLF-KVFRGKFKADVISYNVIANGWCLVKRTN 224
E ++ +FN ++D KE K+ +A L+ ++ + D+ +Y+ + NG+C+ R +
Sbjct: 323 ERKINPNVVTFNALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLD 382
Query: 225 KALEVLKEMVDRGLNPNLTTYNIVLKGYFRAGQIEEAWRFFLEMKKRKCEIDVVTYTTIV 284
+A + + M+ + PN+ TYN ++ G+ +A +I+E F EM +R + VTYTT++
Sbjct: 383 EAKHMFELMISKDCFPNVVTYNTLINGFCKAKRIDEGVELFREMSQRGLVGNTVTYTTLI 442
Query: 285 HGFGVVGEIKRARNVFDGMVNGGVLPSVATYNAMIQVLCKKDSVENAILVFEEMVGKGYM 344
HGF + A+ VF MV+ GV P++ TYN ++ LCK +E A++VFE +
Sbjct: 443 HGFFQARDCDNAQMVFKQMVSDGVHPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKME 502
Query: 345 PNSTTYNVVIRGLCHTGEMERALEFVGRMKDDECEPNVQTYNILIRYFCDAGEIERGLEL 404
P TYN++I G+C G++E + + +P+V YN +I FC G E L
Sbjct: 503 PTIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPDVIIYNTMISGFCRKGLKEEADAL 562
Query: 405 FEKMGSGVCLPNLDT 419
F KM LP+ T
Sbjct: 563 FRKMREDGPLPDSGT 577
Score = 139 bits (349), Expect = 7e-32, Method: Compositional matrix adjust.
Identities = 87/334 (26%), Positives = 164/334 (49%), Gaps = 4/334 (1%)
Query: 153 KADRAVKIFLSMHEHGCRQSLNSFNTILDLLCKEKKVEKAYNLF-KVFRGKFKADVISYN 211
K D + + M G +L ++N +++ C+ ++ A L K+ + ++ +++ +
Sbjct: 100 KFDLVISLGEKMQRLGISHNLYTYNILINCFCRRSQISLALALLGKMMKLGYEPSIVTLS 159
Query: 212 VIANGWCLVKRTNKALEVLKEMVDRGLNPNLTTYNIVLKGYFRAGQIEEAWRFFLEMKKR 271
+ NG+C KR + A+ ++ +MV+ G P+ T+ ++ G F + EA M +R
Sbjct: 160 SLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQR 219
Query: 272 KCEIDVVTYTTIVHGFGVVGEIKRARNVFDGMVNGGVLPSVATYNAMIQVLCKKDSVENA 331
C+ ++VTY +V+G G+I A N+ + M + +V Y+ +I LCK ++A
Sbjct: 220 GCQPNLVTYGVVVNGLCKRGDIDLAFNLLNKMEAAKIEANVVIYSTVIDSLCKYRHEDDA 279
Query: 332 ILVFEEMVGKGYMPNSTTYNVVIRGLCHTGEMERALEFVGRMKDDECEPNVQTYNILIRY 391
+ +F EM KG PN TY+ +I LC+ A + M + + PNV T+N LI
Sbjct: 280 LNLFTEMENKGVRPNVITYSSLISCLCNYERWSDASRLLSDMIERKINPNVVTFNALIDA 339
Query: 392 FCDAGEIERGLELFEKMGSGVCLPNLDTYNILISSMFVRKKSDDLLVAGKLLIEMVDRGF 451
F G++ +L+++M P++ TY+ LI+ + + D+ A + M+ +
Sbjct: 340 FVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDE---AKHMFELMISKDC 396
Query: 452 MPRKFTFNRVLNGLLLIGNQGLAKEILRLQSRCG 485
P T+N ++NG E+ R S+ G
Sbjct: 397 FPNVVTYNTLINGFCKAKRIDEGVELFREMSQRG 430
Score = 117 bits (294), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 78/283 (27%), Positives = 141/283 (49%), Gaps = 4/283 (1%)
Query: 188 KVEKAYNLFK-VFRGKFKADVISYNVIANGWCLVKRTNKALEVLKEMVDRGLNPNLTTYN 246
K++ A LF + + + + +N + + +K+ + + + ++M G++ NL TYN
Sbjct: 65 KLDDAIGLFGGMVKSRPLPSIFEFNKLLSAIAKMKKFDLVISLGEKMQRLGISHNLYTYN 124
Query: 247 IVLKGYFRAGQIEEAWRFFLEMKKRKCEIDVVTYTTIVHGFGVVGEIKRARNVFDGMVNG 306
I++ + R QI A +M K E +VT +++++G+ I A + D MV
Sbjct: 125 ILINCFCRRSQISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEM 184
Query: 307 GVLPSVATYNAMIQVLCKKDSVENAILVFEEMVGKGYMPNSTTYNVVIRGLCHTGEMERA 366
G P T+ +I L + A+ + + MV +G PN TY VV+ GLC G+++ A
Sbjct: 185 GYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDIDLA 244
Query: 367 LEFVGRMKDDECEPNVQTYNILIRYFCDAGEIERGLELFEKMGSGVCLPNLDTYNILISS 426
+ +M+ + E NV Y+ +I C + L LF +M + PN+ TY+ LIS
Sbjct: 245 FNLLNKMEAAKIEANVVIYSTVIDSLCKYRHEDDALNLFTEMENKGVRPNVITYSSLISC 304
Query: 427 MFVRKKSDDLLVAGKLLIEMVDRGFMPRKFTFNRVLNGLLLIG 469
+ ++ D A +LL +M++R P TFN +++ + G
Sbjct: 305 LCNYERWSD---ASRLLSDMIERKINPNVVTFNALIDAFVKEG 344
Score = 63.2 bits (152), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 40/199 (20%), Positives = 88/199 (44%)
Query: 236 RGLNPNLTTYNIVLKGYFRAGQIEEAWRFFLEMKKRKCEIDVVTYTTIVHGFGVVGEIKR 295
R + Y +L+ + ++++A F M K + + + ++ + +
Sbjct: 44 RAFSSGSGDYREILRNGLHSMKLDDAIGLFGGMVKSRPLPSIFEFNKLLSAIAKMKKFDL 103
Query: 296 ARNVFDGMVNGGVLPSVATYNAMIQVLCKKDSVENAILVFEEMVGKGYMPNSTTYNVVIR 355
++ + M G+ ++ TYN +I C++ + A+ + +M+ GY P+ T + ++
Sbjct: 104 VISLGEKMQRLGISHNLYTYNILINCFCRRSQISLALALLGKMMKLGYEPSIVTLSSLLN 163
Query: 356 GLCHTGEMERALEFVGRMKDDECEPNVQTYNILIRYFCDAGEIERGLELFEKMGSGVCLP 415
G CH + A+ V +M + P+ T+ LI + + L ++M C P
Sbjct: 164 GYCHGKRISDAVALVDQMVEMGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQP 223
Query: 416 NLDTYNILISSMFVRKKSD 434
NL TY ++++ + R D
Sbjct: 224 NLVTYGVVVNGLCKRGDID 242
Score = 46.2 bits (108), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 36/125 (28%), Positives = 60/125 (48%), Gaps = 3/125 (2%)
Query: 340 GKGYMPNSTTYNVVIRGLCHTGEMERALEFVGRMKDDECEPNVQTYNILIRYFCDAGEIE 399
G+ + S Y ++R H+ +++ A+ G M P++ +N L+ + +
Sbjct: 43 GRAFSSGSGDYREILRNGLHSMKLDDAIGLFGGMVKSRPLPSIFEFNKLLSAIAKMKKFD 102
Query: 400 RGLELFEKMGSGVCLPNLDTYNILISSMFVRKKSDDLLVAGKLLIEMVDRGFMPRKFTFN 459
+ L EKM NL TYNILI+ F R+ L +A LL +M+ G+ P T +
Sbjct: 103 LVISLGEKMQRLGISHNLYTYNILINC-FCRRSQISLALA--LLGKMMKLGYEPSIVTLS 159
Query: 460 RVLNG 464
+LNG
Sbjct: 160 SLLNG 164
>sp|Q9SI78|PPR93_ARATH Pentatricopeptide repeat-containing protein At1g62720
OS=Arabidopsis thaliana GN=At1g62720 PE=2 SV=1
Length = 485
Score = 179 bits (453), Expect = 6e-44, Method: Compositional matrix adjust.
Identities = 105/367 (28%), Positives = 179/367 (48%), Gaps = 7/367 (1%)
Query: 100 AHSPSSFDHAIDLAARLRDYRTVWTLVHRMKSLSLGPTQKTFAIIAERYVSAGKADRAVK 159
H S++ I+ R + ++V +M P T + + + + A+
Sbjct: 101 GHDLYSYNIVINCLCRCSRFVIALSVVGKMMKFGYEPDVVTVSSLINGFCQGNRVFDAID 160
Query: 160 IFLSMHEHGCRQSLNSFNTILDLLCKEKKVEKAYNLF-KVFRGKFKADVISYNVIANGWC 218
+ M E G R + +NTI+D CK V A LF ++ R +AD ++YN + G C
Sbjct: 161 LVSKMEEMGFRPDVVIYNTIIDGSCKIGLVNDAVELFDRMERDGVRADAVTYNSLVAGLC 220
Query: 219 LVKRTNKALEVLKEMVDRGLNPNLTTYNIVLKGYFRAGQIEEAWRFFLEMKKRKCEIDVV 278
R + A ++++MV R + PN+ T+ V+ + + G+ EA + + EM +R + DV
Sbjct: 221 CSGRWSDAARLMRDMVMRDIVPNVITFTAVIDVFVKEGKFSEAMKLYEEMTRRCVDPDVF 280
Query: 279 TYTTIVHGFGVVGEIKRARNVFDGMVNGGVLPSVATYNAMIQVLCKKDSVENAILVFEEM 338
TY ++++G + G + A+ + D MV G LP V TYN +I CK V+ +F EM
Sbjct: 281 TYNSLINGLCMHGRVDEAKQMLDLMVTKGCLPDVVTYNTLINGFCKSKRVDEGTKLFREM 340
Query: 339 VGKGYMPNSTTYNVVIRGLCHTGEMERALEFVGRMKDDECEPNVQTYNILIRYFCDAGEI 398
+G + ++ TYN +I+G G + A E RM + PN++TY+IL+ C +
Sbjct: 341 AQRGLVGDTITYNTIIQGYFQAGRPDAAQEIFSRM---DSRPNIRTYSILLYGLCMNWRV 397
Query: 399 ERGLELFEKMGSGVCLPNLDTYNILISSMFVRKKSDDLLVAGKLLIEMVDRGFMPRKFTF 458
E+ L LFE M ++ TYNI+I M +D A L + +G P ++
Sbjct: 398 EKALVLFENMQKSEIELDITTYNIVIHGMCKIGNVED---AWDLFRSLSCKGLKPDVVSY 454
Query: 459 NRVLNGL 465
+++G
Sbjct: 455 TTMISGF 461
Score = 149 bits (375), Expect = 6e-35, Method: Compositional matrix adjust.
Identities = 90/333 (27%), Positives = 164/333 (49%), Gaps = 7/333 (2%)
Query: 136 PTQKTFAIIAERYVSAGKADRAVKIFLSMHEHGCRQSLNSFNTILDLLCKEKKVEKAYNL 195
P+ F+ + + + D + +F M G L S+N +++ LC+ + A ++
Sbjct: 67 PSIVDFSKVLSKIAKSKNYDLVISLFHHMEVCGIGHDLYSYNIVINCLCRCSRFVIALSV 126
Query: 196 F-KVFRGKFKADVISYNVIANGWCLVKRTNKALEVLKEMVDRGLNPNLTTYNIVLKGYFR 254
K+ + ++ DV++ + + NG+C R A++++ +M + G P++ YN ++ G +
Sbjct: 127 VGKMMKFGYEPDVVTVSSLINGFCQGNRVFDAIDLVSKMEEMGFRPDVVIYNTIIDGSCK 186
Query: 255 AGQIEEAWRFFLEMKKRKCEIDVVTYTTIVHGFGVVGEIKRARNVFDGMVNGGVLPSVAT 314
G + +A F M++ D VTY ++V G G A + MV ++P+V T
Sbjct: 187 IGLVNDAVELFDRMERDGVRADAVTYNSLVAGLCCSGRWSDAARLMRDMVMRDIVPNVIT 246
Query: 315 YNAMIQVLCKKDSVENAILVFEEMVGKGYMPNSTTYNVVIRGLCHTGEMERALEFVGRMK 374
+ A+I V K+ A+ ++EEM + P+ TYN +I GLC G ++ A + + M
Sbjct: 247 FTAVIDVFVKEGKFSEAMKLYEEMTRRCVDPDVFTYNSLINGLCMHGRVDEAKQMLDLMV 306
Query: 375 DDECEPNVQTYNILIRYFCDAGEIERGLELFEKMGSGVCLPNLDTYNILISSMFVRKKSD 434
C P+V TYN LI FC + ++ G +LF +M + + TYN +I F + D
Sbjct: 307 TKGCLPDVVTYNTLINGFCKSKRVDEGTKLFREMAQRGLVGDTITYNTIIQGYFQAGRPD 366
Query: 435 DLLVAGKLLIEMVDRGFMPRKFTFNRVLNGLLL 467
A ++ M R P T++ +L GL +
Sbjct: 367 ---AAQEIFSRMDSR---PNIRTYSILLYGLCM 393
Score = 140 bits (353), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 93/336 (27%), Positives = 158/336 (47%), Gaps = 5/336 (1%)
Query: 150 SAGKADRAVKIFLSMHEHGCRQSLNSFNTILDLLCKEKKVEKAYNLFKVFR-GKFKADVI 208
S+ + + +F M + S+ F+ +L + K K + +LF D+
Sbjct: 46 SSMNLEEEIDLFCKMIQSRPLPSIVDFSKVLSKIAKSKNYDLVISLFHHMEVCGIGHDLY 105
Query: 209 SYNVIANGWCLVKRTNKALEVLKEMVDRGLNPNLTTYNIVLKGYFRAGQIEEAWRFFLEM 268
SYN++ N C R AL V+ +M+ G P++ T + ++ G+ + ++ +A +M
Sbjct: 106 SYNIVINCLCRCSRFVIALSVVGKMMKFGYEPDVVTVSSLINGFCQGNRVFDAIDLVSKM 165
Query: 269 KKRKCEIDVVTYTTIVHGFGVVGEIKRARNVFDGMVNGGVLPSVATYNAMIQVLCKKDSV 328
++ DVV Y TI+ G +G + A +FD M GV TYN+++ LC
Sbjct: 166 EEMGFRPDVVIYNTIIDGSCKIGLVNDAVELFDRMERDGVRADAVTYNSLVAGLCCSGRW 225
Query: 329 ENAILVFEEMVGKGYMPNSTTYNVVIRGLCHTGEMERALEFVGRMKDDECEPNVQTYNIL 388
+A + +MV + +PN T+ VI G+ A++ M +P+V TYN L
Sbjct: 226 SDAARLMRDMVMRDIVPNVITFTAVIDVFVKEGKFSEAMKLYEEMTRRCVDPDVFTYNSL 285
Query: 389 IRYFCDAGEIERGLELFEKMGSGVCLPNLDTYNILISSMFVRKKSDDLLVAGKLLIEMVD 448
I C G ++ ++ + M + CLP++ TYN LI+ K+ D+ KL EM
Sbjct: 286 INGLCMHGRVDEAKQMLDLMVTKGCLPDVVTYNTLINGFCKSKRVDE---GTKLFREMAQ 342
Query: 449 RGFMPRKFTFNRVLNGLLLIGNQGLAKEIL-RLQSR 483
RG + T+N ++ G G A+EI R+ SR
Sbjct: 343 RGLVGDTITYNTIIQGYFQAGRPDAAQEIFSRMDSR 378
Score = 136 bits (343), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 83/311 (26%), Positives = 154/311 (49%), Gaps = 4/311 (1%)
Query: 106 FDHAIDLAARLRDYRTVWTLVHRMKSLSLGPTQKTFAIIAERYVSAGKADRAVKIFLSMH 165
++ ID + ++ L RM+ + T+ + +G+ A ++ M
Sbjct: 177 YNTIIDGSCKIGLVNDAVELFDRMERDGVRADAVTYNSLVAGLCCSGRWSDAARLMRDMV 236
Query: 166 EHGCRQSLNSFNTILDLLCKEKKVEKAYNLFK-VFRGKFKADVISYNVIANGWCLVKRTN 224
++ +F ++D+ KE K +A L++ + R DV +YN + NG C+ R +
Sbjct: 237 MRDIVPNVITFTAVIDVFVKEGKFSEAMKLYEEMTRRCVDPDVFTYNSLINGLCMHGRVD 296
Query: 225 KALEVLKEMVDRGLNPNLTTYNIVLKGYFRAGQIEEAWRFFLEMKKRKCEIDVVTYTTIV 284
+A ++L MV +G P++ TYN ++ G+ ++ +++E + F EM +R D +TY TI+
Sbjct: 297 EAKQMLDLMVTKGCLPDVVTYNTLINGFCKSKRVDEGTKLFREMAQRGLVGDTITYNTII 356
Query: 285 HGFGVVGEIKRARNVFDGMVNGGVLPSVATYNAMIQVLCKKDSVENAILVFEEMVGKGYM 344
G+ G A+ +F M + P++ TY+ ++ LC VE A+++FE M
Sbjct: 357 QGYFQAGRPDAAQEIFSRMDSR---PNIRTYSILLYGLCMNWRVEKALVLFENMQKSEIE 413
Query: 345 PNSTTYNVVIRGLCHTGEMERALEFVGRMKDDECEPNVQTYNILIRYFCDAGEIERGLEL 404
+ TTYN+VI G+C G +E A + + +P+V +Y +I FC + ++ L
Sbjct: 414 LDITTYNIVIHGMCKIGNVEDAWDLFRSLSCKGLKPDVVSYTTMISGFCRKRQWDKSDLL 473
Query: 405 FEKMGSGVCLP 415
+ KM LP
Sbjct: 474 YRKMQEDGLLP 484
Score = 92.4 bits (228), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 69/249 (27%), Positives = 112/249 (44%), Gaps = 3/249 (1%)
Query: 240 PNLTTYNIVLKGYFRAGQIEEAWRFFLEMKKRKCEIDVVTYTTIVHGFGVVGEIKRARNV 299
P++ ++ VL ++ + F M+ D+ +Y +++ A +V
Sbjct: 67 PSIVDFSKVLSKIAKSKNYDLVISLFHHMEVCGIGHDLYSYNIVINCLCRCSRFVIALSV 126
Query: 300 FDGMVNGGVLPSVATYNAMIQVLCKKDSVENAILVFEEMVGKGYMPNSTTYNVVIRGLCH 359
M+ G P V T +++I C+ + V +AI + +M G+ P+ YN +I G C
Sbjct: 127 VGKMMKFGYEPDVVTVSSLINGFCQGNRVFDAIDLVSKMEEMGFRPDVVIYNTIIDGSCK 186
Query: 360 TGEMERALEFVGRMKDDECEPNVQTYNILIRYFCDAGEIERGLELFEKMGSGVCLPNLDT 419
G + A+E RM+ D + TYN L+ C +G L M +PN+ T
Sbjct: 187 IGLVNDAVELFDRMERDGVRADAVTYNSLVAGLCCSGRWSDAARLMRDMVMRDIVPNVIT 246
Query: 420 YNILISSMFVRKKSDDLLVAGKLLIEMVDRGFMPRKFTFNRVLNGLLLIGNQGLAKEILR 479
+ +I +FV K A KL EM R P FT+N ++NGL + G AK++L
Sbjct: 247 FTAVID-VFV--KEGKFSEAMKLYEEMTRRCVDPDVFTYNSLINGLCMHGRVDEAKQMLD 303
Query: 480 LQSRCGRLP 488
L G LP
Sbjct: 304 LMVTKGCLP 312
>sp|P0C8A0|PP275_ARATH Pentatricopeptide repeat-containing protein At3g49730
OS=Arabidopsis thaliana GN=At3g49730 PE=2 SV=1
Length = 638
Score = 179 bits (453), Expect = 6e-44, Method: Compositional matrix adjust.
Identities = 112/413 (27%), Positives = 198/413 (47%), Gaps = 7/413 (1%)
Query: 69 PQLVDQIIKRLWNHALKALHFFNILSYHPTYAHSPSSFDHAIDLAARLRDYRTVWTLVHR 128
P L+ +++ R + FF + P Y HS + + +++R + VW L+
Sbjct: 97 PGLIIRVLSRCGDAGNLGYRFFLWATKQPGYFHSYEVCKSMVMILSKMRQFGAVWGLIEE 156
Query: 129 MKSLSLGPTQ-KTFAIIAERYVSAGKADRAVKIFLSMHEHGCRQSLNSFNTILDLLCKEK 187
M+ + + + F ++ R+ SA +AV++ M ++G F +LD LCK
Sbjct: 157 MRKTNPELIEPELFVVLMRRFASANMVKKAVEVLDEMPKYGLEPDEYVFGCLLDALCKNG 216
Query: 188 KVEKAYNLFKVFRGKFKADVISYNVIANGWCLVKRTNKALEVLKEMVDRGLNPNLTTYNI 247
V++A +F+ R KF ++ + + GWC + +A EVL +M + GL P++ +
Sbjct: 217 SVKEASKVFEDMREKFPPNLRYFTSLLYGWCREGKLMEAKEVLVQMKEAGLEPDIVVFTN 276
Query: 248 VLKGYFRAGQIEEAWRFFLEMKKRKCEIDVVTYTTIVHGFGVVGE-IKRARNVFDGMVNG 306
+L GY AG++ +A+ +M+KR E +V YT ++ + + A VF M
Sbjct: 277 LLSGYAHAGKMADAYDLMNDMRKRGFEPNVNCYTVLIQALCRTEKRMDEAMRVFVEMERY 336
Query: 307 GVLPSVATYNAMIQVLCKKDSVENAILVFEEMVGKGYMPNSTTYNVVIRGLCHTGEMERA 366
G + TY A+I CK ++ V ++M KG MP+ TY ++ + E
Sbjct: 337 GCEADIVTYTALISGFCKWGMIDKGYSVLDDMRKKGVMPSQVTYMQIMVAHEKKEQFEEC 396
Query: 367 LEFVGRMKDDECEPNVQTYNILIRYFCDAGEIERGLELFEKMGSGVCLPNLDTYNILISS 426
LE + +MK C P++ YN++IR C GE++ + L+ +M + P +DT+ I+I+
Sbjct: 397 LELIEKMKRRGCHPDLLIYNVVIRLACKLGEVKEAVRLWNEMEANGLSPGVDTFVIMING 456
Query: 427 MFVRKKSDDLLVAGKLLIEMVDRGFM--PRKFTFNRVLNGLLLIGNQGLAKEI 477
L+ A EMV RG P+ T +LN L+ +AK++
Sbjct: 457 F---TSQGFLIEACNHFKEMVSRGIFSAPQYGTLKSLLNNLVRDDKLEMAKDV 506
Score = 79.0 bits (193), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 68/310 (21%), Positives = 131/310 (42%), Gaps = 58/310 (18%)
Query: 89 FFNILSYHPTYAHSPSSFDHAIDLAARLRDYRTVWTLVHRMKSLSLGPTQKTFAIIAERY 148
F N+LS YAH A ++ D + L++ M+ P + ++ +
Sbjct: 274 FTNLLS---GYAH-----------AGKMAD---AYDLMNDMRKRGFEPNVNCYTVLIQAL 316
Query: 149 VSAGK-ADRAVKIFLSMHEHGCRQSLNSFNTILDLLCKEKKVEKAYNLFKVFRGK-FKAD 206
K D A+++F+ M +GC + ++ ++ CK ++K Y++ R K
Sbjct: 317 CRTEKRMDEAMRVFVEMERYGCEADIVTYTALISGFCKWGMIDKGYSVLDDMRKKGVMPS 376
Query: 207 VISYNVIANGWCLVKRTNKALEVLKEMVDRGLNPNLTTYNIVLKGYFRAGQIEEAWRFFL 266
++Y I ++ + LE++++M RG +P+L YN+V++ + G+++EA R +
Sbjct: 377 QVTYMQIMVAHEKKEQFEECLELIEKMKRRGCHPDLLIYNVVIRLACKLGEVKEAVRLWN 436
Query: 267 EMKKRKCEIDVVTYTTIVHGFGVVGEIKRARNVFDGMVNGGVL--PSVATYNAMIQVLCK 324
EM+ V T+ +++GF G + A N F MV+ G+ P T +++ L +
Sbjct: 437 EMEANGLSPGVDTFVIMINGFTSQGFLIEACNHFKEMVSRGIFSAPQYGTLKSLLNNLVR 496
Query: 325 KDSVENAILVFE-------------------------------------EMVGKGYMPNS 347
D +E A V+ +M+ MP
Sbjct: 497 DDKLEMAKDVWSCISNKTSSCELNVSAWTIWIHALYAKGHVKEACSYCLDMMEMDLMPQP 556
Query: 348 TTYNVVIRGL 357
TY +++GL
Sbjct: 557 NTYAKLMKGL 566
Score = 59.3 bits (142), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 47/207 (22%), Positives = 92/207 (44%), Gaps = 5/207 (2%)
Query: 123 WTLVHRMKSLSLGPTQKTFAIIAERYVSAGKADRAVKIFLSMHEHGCRQSLNSFNTILDL 182
++++ M+ + P+Q T+ I + + + +++ M GC L +N ++ L
Sbjct: 362 YSVLDDMRKKGVMPSQVTYMQIMVAHEKKEQFEECLELIEKMKRRGCHPDLLIYNVVIRL 421
Query: 183 LCKEKKVEKAYNLFKVFRGK-FKADVISYNVIANGWCLVKRTNKALEVLKEMVDRGL--N 239
CK +V++A L+ V ++ ++ NG+ +A KEMV RG+
Sbjct: 422 ACKLGEVKEAVRLWNEMEANGLSPGVDTFVIMINGFTSQGFLIEACNHFKEMVSRGIFSA 481
Query: 240 PNLTTYNIVLKGYFRAGQIEEAWRFF--LEMKKRKCEIDVVTYTTIVHGFGVVGEIKRAR 297
P T +L R ++E A + + K CE++V +T +H G +K A
Sbjct: 482 PQYGTLKSLLNNLVRDDKLEMAKDVWSCISNKTSSCELNVSAWTIWIHALYAKGHVKEAC 541
Query: 298 NVFDGMVNGGVLPSVATYNAMIQVLCK 324
+ M+ ++P TY +++ L K
Sbjct: 542 SYCLDMMEMDLMPQPNTYAKLMKGLNK 568
>sp|Q0WKZ3|PP105_ARATH Pentatricopeptide repeat-containing protein At1g64580
OS=Arabidopsis thaliana GN=At1g64580 PE=2 SV=1
Length = 523
Score = 177 bits (450), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 110/392 (28%), Positives = 192/392 (48%), Gaps = 4/392 (1%)
Query: 100 AHSPSSFDHAIDLAARLRDYRTVWTLVHRMKSLSLGPTQKTFAIIAERYVSAGKADRAVK 159
+H SF I R L+ +M L P+ T + + + AV
Sbjct: 111 SHDLYSFTILIHCFCRCSRLSLALALLGKMMKLGFRPSIVTLGSLLNGFCQGNRFQEAVS 170
Query: 160 IFLSMHEHGCRQSLNSFNTILDLLCKEKKVEKAYNLFKVFRGK-FKADVISYNVIANGWC 218
+ SM G ++ +NT+++ LCK + + A +F K +AD ++YN + +G
Sbjct: 171 LVDSMDGFGFVPNVVIYNTVINGLCKNRDLNNALEVFYCMEKKGIRADAVTYNTLISGLS 230
Query: 219 LVKRTNKALEVLKEMVDRGLNPNLTTYNIVLKGYFRAGQIEEAWRFFLEMKKRKCEIDVV 278
R A +L++MV R ++PN+ + ++ + + G + EA + EM +R +V
Sbjct: 231 NSGRWTDAARLLRDMVKRKIDPNVIFFTALIDTFVKEGNLLEARNLYKEMIRRSVVPNVF 290
Query: 279 TYTTIVHGFGVVGEIKRARNVFDGMVNGGVLPSVATYNAMIQVLCKKDSVENAILVFEEM 338
TY ++++GF + G + A+ +FD MV+ G P V TYN +I CK VE+ + +F EM
Sbjct: 291 TYNSLINGFCIHGCLGDAKYMFDLMVSKGCFPDVVTYNTLITGFCKSKRVEDGMKLFCEM 350
Query: 339 VGKGYMPNSTTYNVVIRGLCHTGEMERALEFVGRMKDDECEPNVQTYNILIRYFCDAGEI 398
+G + ++ TYN +I G C G++ A + RM D P++ TYNIL+ C+ G+I
Sbjct: 351 TYQGLVGDAFTYNTLIHGYCQAGKLNVAQKVFNRMVDCGVSPDIVTYNILLDCLCNNGKI 410
Query: 399 ERGLELFEKMGSGVCLPNLDTYNILISSMFVRKKSDDLLVAGKLLIEMVDRGFMPRKFTF 458
E+ L + E + ++ TYNI+I + ++D L A L + +G P +
Sbjct: 411 EKALVMVEDLQKSEMDVDIITYNIIIQGLC---RTDKLKEAWCLFRSLTRKGVKPDAIAY 467
Query: 459 NRVLNGLLLIGNQGLAKEILRLQSRCGRLPRQ 490
+++GL G Q A ++ R G +P +
Sbjct: 468 ITMISGLCRKGLQREADKLCRRMKEDGFMPSE 499
Score = 122 bits (305), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 78/321 (24%), Positives = 145/321 (45%), Gaps = 36/321 (11%)
Query: 106 FDHAIDLAARLRDYRTVWTLVHRMKSLSLGPTQKTFAIIAERYVSAGKADRAVKIFLSMH 165
++ I+ + RD + + M+ + T+ + ++G+ A ++ M
Sbjct: 187 YNTVINGLCKNRDLNNALEVFYCMEKKGIRADAVTYNTLISGLSNSGRWTDAARLLRDMV 246
Query: 166 EHGCRQSLNSFNTILDLLCKEKKVEKAYNLFK-VFRGKFKADVISYNVIANGWCLVKRTN 224
+ ++ F ++D KE + +A NL+K + R +V +YN + NG+C+
Sbjct: 247 KRKIDPNVIFFTALIDTFVKEGNLLEARNLYKEMIRRSVVPNVFTYNSLINGFCIHGCLG 306
Query: 225 KALEVLKEMVDRGLNPNLTTYNIVLKGYFRAGQIEEAWRFFLEMKKRKCEIDVVTYTTIV 284
A + MV +G P++ TYN ++ G+ ++ ++E+ + F EM + D TY T++
Sbjct: 307 DAKYMFDLMVSKGCFPDVVTYNTLITGFCKSKRVEDGMKLFCEMTYQGLVGDAFTYNTLI 366
Query: 285 HGFGVVGEIKRARNVFDGMVNGGVLPSVATYNAM-------------------------- 318
HG+ G++ A+ VF+ MV+ GV P + TYN +
Sbjct: 367 HGYCQAGKLNVAQKVFNRMVDCGVSPDIVTYNILLDCLCNNGKIEKALVMVEDLQKSEMD 426
Query: 319 ---------IQVLCKKDSVENAILVFEEMVGKGYMPNSTTYNVVIRGLCHTGEMERALEF 369
IQ LC+ D ++ A +F + KG P++ Y +I GLC G A +
Sbjct: 427 VDIITYNIIIQGLCRTDKLKEAWCLFRSLTRKGVKPDAIAYITMISGLCRKGLQREADKL 486
Query: 370 VGRMKDDECEPNVQTYNILIR 390
RMK+D P+ + Y+ +R
Sbjct: 487 CRRMKEDGFMPSERIYDETLR 507
Score = 96.7 bits (239), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 84/358 (23%), Positives = 157/358 (43%), Gaps = 42/358 (11%)
Query: 165 HEHGCRQSL-NSFNTILDLLCKEKKVEKAYNLF-KVFRGKFKADVISYNVIANGWCLVKR 222
H H R+ L N + I K + A++LF ++ + + ++ + + + +
Sbjct: 43 HHHHYRERLRNELHCI--------KFDDAFSLFCEMLQSRPIPSIVDFTRVLTVIAKMNK 94
Query: 223 TNKALEVLKEMVDRGLNPNLTTYNIVLKGYFRAGQIEEAWRFFLEMKKRKCEIDVVTYTT 282
+ + + +M + G++ +L ++ I++ + R ++ A +M K +VT +
Sbjct: 95 FDIVIYLYHKMENLGISHDLYSFTILIHCFCRCSRLSLALALLGKMMKLGFRPSIVTLGS 154
Query: 283 IVHGFGVVGEIKRARNVFDGMVNGGVLPSVATYNAMIQVLCKKDSVENAILVFEEMVGKG 342
+++GF + A ++ D M G +P+V YN +I LCK + NA+ VF M KG
Sbjct: 155 LLNGFCQGNRFQEAVSLVDSMDGFGFVPNVVIYNTVINGLCKNRDLNNALEVFYCMEKKG 214
Query: 343 YMPNSTTYNVVIRGLCHTGEMERALEFVGRMKDDECEPNVQTYNILIRYFCDAGEIERGL 402
++ TYN +I GL ++G A + M + +PNV + LI F G +
Sbjct: 215 IRADAVTYNTLISGLSNSGRWTDAARLLRDMVKRKIDPNVIFFTALIDTFVKEGNLLEAR 274
Query: 403 ELFEKMGSGVCLPNLDTYNILISSMFVR------KKSDDLLVAG---------------- 440
L+++M +PN+ TYN LI+ + K DL+V+
Sbjct: 275 NLYKEMIRRSVVPNVFTYNSLINGFCIHGCLGDAKYMFDLMVSKGCFPDVVTYNTLITGF 334
Query: 441 ----------KLLIEMVDRGFMPRKFTFNRVLNGLLLIGNQGLAKEILRLQSRCGRLP 488
KL EM +G + FT+N +++G G +A+++ CG P
Sbjct: 335 CKSKRVEDGMKLFCEMTYQGLVGDAFTYNTLIHGYCQAGKLNVAQKVFNRMVDCGVSP 392
Score = 48.5 bits (114), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 35/161 (21%), Positives = 77/161 (47%), Gaps = 4/161 (2%)
Query: 100 AHSPSSFDHAIDLAARLRDYRTVWTLVHRMKSLSLGPTQKTFAIIAERYVSAGKADRAVK 159
A + ++ H A +L + V+ +RM + P T+ I+ + + GK ++A+
Sbjct: 359 AFTYNTLIHGYCQAGKLNVAQKVF---NRMVDCGVSPDIVTYNILLDCLCNNGKIEKALV 415
Query: 160 IFLSMHEHGCRQSLNSFNTILDLLCKEKKVEKAYNLFKVF-RGKFKADVISYNVIANGWC 218
+ + + + ++N I+ LC+ K+++A+ LF+ R K D I+Y + +G C
Sbjct: 416 MVEDLQKSEMDVDIITYNIIIQGLCRTDKLKEAWCLFRSLTRKGVKPDAIAYITMISGLC 475
Query: 219 LVKRTNKALEVLKEMVDRGLNPNLTTYNIVLKGYFRAGQIE 259
+A ++ + M + G P+ Y+ L+ ++ + E
Sbjct: 476 RKGLQREADKLCRRMKEDGFMPSERIYDETLRDHYTSLSAE 516
>sp|P0C7Q7|PPR38_ARATH Putative pentatricopeptide repeat-containing protein At1g12700,
mitochondrial OS=Arabidopsis thaliana GN=At1g12700 PE=3
SV=1
Length = 602
Score = 177 bits (449), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 102/365 (27%), Positives = 183/365 (50%), Gaps = 4/365 (1%)
Query: 125 LVHRMKSLSLGPTQKTFAIIAERYVSAGKADRAVKIFLSMHEHGCRQSLNSFNTILDLLC 184
LV RM P T+ I +G A+ + M E + + +++TI+D LC
Sbjct: 180 LVDRMVENGCQPDVVTYNSIVNGICRSGDTSLALDLLRKMEERNVKADVFTYSTIIDSLC 239
Query: 185 KEKKVEKAYNLFKVFRGK-FKADVISYNVIANGWCLVKRTNKALEVLKEMVDRGLNPNLT 243
++ ++ A +LFK K K+ V++YN + G C + N +LK+MV R + PN+
Sbjct: 240 RDGCIDAAISLFKEMETKGIKSSVVTYNSLVRGLCKAGKWNDGALLLKDMVSREIVPNVI 299
Query: 244 TYNIVLKGYFRAGQIEEAWRFFLEMKKRKCEIDVVTYTTIVHGFGVVGEIKRARNVFDGM 303
T+N++L + + G+++EA + EM R +++TY T++ G+ + + A N+ D M
Sbjct: 300 TFNVLLDVFVKEGKLQEANELYKEMITRGISPNIITYNTLMDGYCMQNRLSEANNMLDLM 359
Query: 304 VNGGVLPSVATYNAMIQVLCKKDSVENAILVFEEMVGKGYMPNSTTYNVVIRGLCHTGEM 363
V P + T+ ++I+ C V++ + VF + +G + N+ TY+++++G C +G++
Sbjct: 360 VRNKCSPDIVTFTSLIKGYCMVKRVDDGMKVFRNISKRGLVANAVTYSILVQGFCQSGKI 419
Query: 364 ERALEFVGRMKDDECEPNVQTYNILIRYFCDAGEIERGLELFEKMGSGVCLPNLDTYNIL 423
+ A E M P+V TY IL+ CD G++E+ LE+FE + + Y +
Sbjct: 420 KLAEELFQEMVSHGVLPDVMTYGILLDGLCDNGKLEKALEIFEDLQKSKMDLGIVMYTTI 479
Query: 424 ISSMFVRKKSDDLLVAGKLLIEMVDRGFMPRKFTFNRVLNGLLLIGNQGLAKEILRLQSR 483
I M K +D A L + +G P T+ +++GL G+ A +LR
Sbjct: 480 IEGMCKGGKVED---AWNLFCSLPCKGVKPNVMTYTVMISGLCKKGSLSEANILLRKMEE 536
Query: 484 CGRLP 488
G P
Sbjct: 537 DGNAP 541
Score = 155 bits (393), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 95/329 (28%), Positives = 173/329 (52%), Gaps = 16/329 (4%)
Query: 125 LVHRMKSLSLGPTQKTFAIIAERYVSAGKADRAVKIFLSMHEHGCRQSLNSFNTILDLLC 184
L+ M S + P TF ++ + +V GK A +++ M G ++ ++NT++D C
Sbjct: 285 LLKDMVSREIVPNVITFNVLLDVFVKEGKLQEANELYKEMITRGISPNIITYNTLMDGYC 344
Query: 185 KEKKVEKAYNLFKVF-RGKFKADVISYNVIANGWCLVKRTNKALEVLKEMVDRGLNPNLT 243
+ ++ +A N+ + R K D++++ + G+C+VKR + ++V + + RGL N
Sbjct: 345 MQNRLSEANNMLDLMVRNKCSPDIVTFTSLIKGYCMVKRVDDGMKVFRNISKRGLVANAV 404
Query: 244 TYNIVLKGYFRAGQIEEAWRFFLEMKKRKCEIDVVTYTTIVHGFGVVGEIKRARNVFDGM 303
TY+I+++G+ ++G+I+ A F EM DV+TY ++ G G++++A +F+ +
Sbjct: 405 TYSILVQGFCQSGKIKLAEELFQEMVSHGVLPDVMTYGILLDGLCDNGKLEKALEIFEDL 464
Query: 304 VNGGVLPSVATYNAMIQVLCKKDSVENAILVFEEMVGKGYMPNSTTYNVVIRGLCHTGEM 363
+ + Y +I+ +CK VE+A +F + KG PN TY V+I GLC G +
Sbjct: 465 QKSKMDLGIVMYTTIIEGMCKGGKVEDAWNLFCSLPCKGVKPNVMTYTVMISGLCKKGSL 524
Query: 364 ERALEFVGRMKDDECEPNVQTYNILIRYFCDAGEIERGLELFEKMGSGVCLPNLDTYNIL 423
A + +M++D PN TYN LIR G++ +L E+M S C + D +I
Sbjct: 525 SEANILLRKMEEDGNAPNDCTYNTLIRAHLRDGDLTASAKLIEEMKS--CGFSADASSI- 581
Query: 424 ISSMFVRKKSDDLLVAGKLLIEMVDRGFM 452
K D+L++G+L D+ F+
Sbjct: 582 -------KMVIDMLLSGEL-----DKSFL 598
Score = 137 bits (346), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 105/373 (28%), Positives = 175/373 (46%), Gaps = 41/373 (10%)
Query: 153 KADRAVKIFLSMHEHGCRQSLNSFNTILDLLCKEKKVEKAYNLFKVFRGKFKADVISYNV 212
K D A+ +F M SL F+ + + K+ +NL F + + + I++N+
Sbjct: 68 KKDDAIALFQEMIRSRPLPSLVDFSRFFSAIARTKQ----FNLVLDFCKQLELNGIAHNI 123
Query: 213 -----IANGWCLVKRTNKALEVLKEMVDRGLNPNLTTYNIVLKGYFRAGQIEEAWRFFLE 267
+ N +C +T A VL +++ G P+ TT+N ++KG F G++ EA
Sbjct: 124 YTLNIMINCFCRCCKTCFAYSVLGKVMKLGYEPDTTTFNTLIKGLFLEGKVSEAVVLVDR 183
Query: 268 MKKRKCEIDVVTYTTIVHGFGVVGEIKRARNVFDGMVNGGVLPSVATYNAMIQVLCKKDS 327
M + C+ DVVTY +IV+G G+ A ++ M V V TY+ +I LC+
Sbjct: 184 MVENGCQPDVVTYNSIVNGICRSGDTSLALDLLRKMEERNVKADVFTYSTIIDSLCRDGC 243
Query: 328 VENAILVFEEMVGKGYMPNSTTYNVVIRGLCHTGEMERALEFVGRMKDDECEPNVQTYNI 387
++ AI +F+EM KG + TYN ++RGLC G+ + M E PNV T+N+
Sbjct: 244 IDAAISLFKEMETKGIKSSVVTYNSLVRGLCKAGKWNDGALLLKDMVSREIVPNVITFNV 303
Query: 388 LIRYFCDAGEIERGLELFEKMGSGVCLPNLDTYNILIS---------------SMFVRKK 432
L+ F G+++ EL+++M + PN+ TYN L+ + VR K
Sbjct: 304 LLDVFVKEGKLQEANELYKEMITRGISPNIITYNTLMDGYCMQNRLSEANNMLDLMVRNK 363
Query: 433 -SDDL-----LVAGKLLIEMVD-----------RGFMPRKFTFNRVLNGLLLIGNQGLAK 475
S D+ L+ G +++ VD RG + T++ ++ G G LA+
Sbjct: 364 CSPDIVTFTSLIKGYCMVKRVDDGMKVFRNISKRGLVANAVTYSILVQGFCQSGKIKLAE 423
Query: 476 EILRLQSRCGRLP 488
E+ + G LP
Sbjct: 424 ELFQEMVSHGVLP 436
>sp|Q9FIX3|PP407_ARATH Pentatricopeptide repeat-containing protein At5g39710
OS=Arabidopsis thaliana GN=EMB2745 PE=2 SV=1
Length = 747
Score = 176 bits (447), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 118/429 (27%), Positives = 203/429 (47%), Gaps = 12/429 (2%)
Query: 66 HWTPQLVDQIIKRLWNHAL--KALHFFNILSYHPTYAHSPSSFDHAIDLAARLRDYRTVW 123
+ T + D ++K +L KAL ++ H P + L A +R R +
Sbjct: 131 YSTSSVFDLVVKSYSRLSLIDKALSIVHLAQAH---GFMPGVLSYNAVLDATIRSKRNIS 187
Query: 124 ---TLVHRMKSLSLGPTQKTFAIIAERYVSAGKADRAVKIFLSMHEHGCRQSLNSFNTIL 180
+ M + P T+ I+ + AG D A+ +F M GC ++ ++NT++
Sbjct: 188 FAENVFKEMLESQVSPNVFTYNILIRGFCFAGNIDVALTLFDKMETKGCLPNVVTYNTLI 247
Query: 181 DLLCKEKKVEKAYNLFKVFRGK-FKADVISYNVIANGWCLVKRTNKALEVLKEMVDRGLN 239
D CK +K++ + L + K + ++ISYNV+ NG C R + VL EM RG +
Sbjct: 248 DGYCKLRKIDDGFKLLRSMALKGLEPNLISYNVVINGLCREGRMKEVSFVLTEMNRRGYS 307
Query: 240 PNLTTYNIVLKGYFRAGQIEEAWRFFLEMKKRKCEIDVVTYTTIVHGFGVVGEIKRARNV 299
+ TYN ++KGY + G +A EM + V+TYT+++H G + RA
Sbjct: 308 LDEVTYNTLIKGYCKEGNFHQALVMHAEMLRHGLTPSVITYTSLIHSMCKAGNMNRAMEF 367
Query: 300 FDGMVNGGVLPSVATYNAMIQVLCKKDSVENAILVFEEMVGKGYMPNSTTYNVVIRGLCH 359
D M G+ P+ TY ++ +K + A V EM G+ P+ TYN +I G C
Sbjct: 368 LDQMRVRGLCPNERTYTTLVDGFSQKGYMNEAYRVLREMNDNGFSPSVVTYNALINGHCV 427
Query: 360 TGEMERALEFVGRMKDDECEPNVQTYNILIRYFCDAGEIERGLELFEKMGSGVCLPNLDT 419
TG+ME A+ + MK+ P+V +Y+ ++ FC + +++ L + +M P+ T
Sbjct: 428 TGKMEDAIAVLEDMKEKGLSPDVVSYSTVLSGFCRSYDVDEALRVKREMVEKGIKPDTIT 487
Query: 420 YNILISSMFVRKKSDDLLVAGKLLIEMVDRGFMPRKFTFNRVLNGLLLIGNQGLAKEILR 479
Y+ LI ++++ + A L EM+ G P +FT+ ++N + G+ A ++
Sbjct: 488 YSSLIQGFCEQRRTKE---ACDLYEEMLRVGLPPDEFTYTALINAYCMEGDLEKALQLHN 544
Query: 480 LQSRCGRLP 488
G LP
Sbjct: 545 EMVEKGVLP 553
Score = 166 bits (420), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 114/439 (25%), Positives = 209/439 (47%), Gaps = 9/439 (2%)
Query: 59 TLHCPS---LHWTPQ-LVDQIIKRLWNHALKALHFFNILSYHPTYAHSPSSFDHAIDLAA 114
TLH + L+ T Q L + + + + +L F ++ + + S FD + +
Sbjct: 86 TLHILTKFKLYKTAQILAEDVAAKTLDDEYASLVFKSLQETYDLCYSTSSVFDLVVKSYS 145
Query: 115 RLRDYRTVWTLVHRMKSLSLGPTQKTF-AIIAERYVSAGKADRAVKIFLSMHEHGCRQSL 173
RL ++VH ++ P ++ A++ S A +F M E ++
Sbjct: 146 RLSLIDKALSIVHLAQAHGFMPGVLSYNAVLDATIRSKRNISFAENVFKEMLESQVSPNV 205
Query: 174 NSFNTILDLLCKEKKVEKAYNLFKVFRGK-FKADVISYNVIANGWCLVKRTNKALEVLKE 232
++N ++ C ++ A LF K +V++YN + +G+C +++ + ++L+
Sbjct: 206 FTYNILIRGFCFAGNIDVALTLFDKMETKGCLPNVVTYNTLIDGYCKLRKIDDGFKLLRS 265
Query: 233 MVDRGLNPNLTTYNIVLKGYFRAGQIEEAWRFFLEMKKRKCEIDVVTYTTIVHGFGVVGE 292
M +GL PNL +YN+V+ G R G+++E EM +R +D VTY T++ G+ G
Sbjct: 266 MALKGLEPNLISYNVVINGLCREGRMKEVSFVLTEMNRRGYSLDEVTYNTLIKGYCKEGN 325
Query: 293 IKRARNVFDGMVNGGVLPSVATYNAMIQVLCKKDSVENAILVFEEMVGKGYMPNSTTYNV 352
+A + M+ G+ PSV TY ++I +CK ++ A+ ++M +G PN TY
Sbjct: 326 FHQALVMHAEMLRHGLTPSVITYTSLIHSMCKAGNMNRAMEFLDQMRVRGLCPNERTYTT 385
Query: 353 VIRGLCHTGEMERALEFVGRMKDDECEPNVQTYNILIRYFCDAGEIERGLELFEKMGSGV 412
++ G G M A + M D+ P+V TYN LI C G++E + + E M
Sbjct: 386 LVDGFSQKGYMNEAYRVLREMNDNGFSPSVVTYNALINGHCVTGKMEDAIAVLEDMKEKG 445
Query: 413 CLPNLDTYNILISSMFVRKKSDDLLVAGKLLIEMVDRGFMPRKFTFNRVLNGLLLIGNQG 472
P++ +Y+ ++S F R S D+ A ++ EMV++G P T++ ++ G
Sbjct: 446 LSPDVVSYSTVLSG-FCR--SYDVDEALRVKREMVEKGIKPDTITYSSLIQGFCEQRRTK 502
Query: 473 LAKEILRLQSRCGRLPRQF 491
A ++ R G P +F
Sbjct: 503 EACDLYEEMLRVGLPPDEF 521
Score = 154 bits (390), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 101/375 (26%), Positives = 183/375 (48%), Gaps = 39/375 (10%)
Query: 124 TLVHRMKSLSLGPTQKTFAIIAERYVSAGKADRAVKIFLSMHEHGCRQSLNSFNTILDLL 183
TL +M++ P T+ + + Y K D K+ SM G +L S+N +++ L
Sbjct: 226 TLFDKMETKGCLPNVVTYNTLIDGYCKLRKIDDGFKLLRSMALKGLEPNLISYNVVINGL 285
Query: 184 CKEKKV-EKAYNLFKVFRGKFKADVISYNVIANGWCLVKRTNKALEVLKEMVDRGLNPNL 242
C+E ++ E ++ L ++ R + D ++YN + G+C ++AL + EM+ GL P++
Sbjct: 286 CREGRMKEVSFVLTEMNRRGYSLDEVTYNTLIKGYCKEGNFHQALVMHAEMLRHGLTPSV 345
Query: 243 TTYNIVLKGYFRAGQIEEAWRFFLEMKKRKCEIDVVTYTTIVHGFGVVGEIKRARNVFDG 302
TY ++ +AG + A F +M+ R + TYTT+V GF G + A V
Sbjct: 346 ITYTSLIHSMCKAGNMNRAMEFLDQMRVRGLCPNERTYTTLVDGFSQKGYMNEAYRVLRE 405
Query: 303 MVNGGVLPSVATYNAMIQVLCKKDSVENAILVFEEMVGKGYMPNSTTYNVVIRGLCHTGE 362
M + G PSV TYNA+I C +E+AI V E+M KG P+ +Y+ V+ G C + +
Sbjct: 406 MNDNGFSPSVVTYNALINGHCVTGKMEDAIAVLEDMKEKGLSPDVVSYSTVLSGFCRSYD 465
Query: 363 MERALEFVGRMKDDECEPNVQTYNILIRYFCDA--------------------------- 395
++ AL M + +P+ TY+ LI+ FC+
Sbjct: 466 VDEALRVKREMVEKGIKPDTITYSSLIQGFCEQRRTKEACDLYEEMLRVGLPPDEFTYTA 525
Query: 396 --------GEIERGLELFEKMGSGVCLPNLDTYNILISSMFVRKKSDDLLVAGKLLIEMV 447
G++E+ L+L +M LP++ TY++LI+ + + ++ + A +LL+++
Sbjct: 526 LINAYCMEGDLEKALQLHNEMVEKGVLPDVVTYSVLINGLNKQSRTRE---AKRLLLKLF 582
Query: 448 DRGFMPRKFTFNRVL 462
+P T++ ++
Sbjct: 583 YEESVPSDVTYHTLI 597
Score = 135 bits (341), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 94/356 (26%), Positives = 174/356 (48%), Gaps = 13/356 (3%)
Query: 72 VDQIIKRLWNHALKALHFFNILSYHPTYAHSPSSFDHAIDLAARLRDYRTVWTLVHRMKS 131
+D K L + ALK L N++SY+ + + R+++ V T ++R +
Sbjct: 256 IDDGFKLLRSMALKGLEP-NLISYNVVI--------NGLCREGRMKEVSFVLTEMNR-RG 305
Query: 132 LSLGPTQKTFAIIAERYVSAGKADRAVKIFLSMHEHGCRQSLNSFNTILDLLCKEKKVEK 191
SL + T+ + + Y G +A+ + M HG S+ ++ +++ +CK + +
Sbjct: 306 YSLD--EVTYNTLIKGYCKEGNFHQALVMHAEMLRHGLTPSVITYTSLIHSMCKAGNMNR 363
Query: 192 AYNLFKVFRGK-FKADVISYNVIANGWCLVKRTNKALEVLKEMVDRGLNPNLTTYNIVLK 250
A R + + +Y + +G+ N+A VL+EM D G +P++ TYN ++
Sbjct: 364 AMEFLDQMRVRGLCPNERTYTTLVDGFSQKGYMNEAYRVLREMNDNGFSPSVVTYNALIN 423
Query: 251 GYFRAGQIEEAWRFFLEMKKRKCEIDVVTYTTIVHGFGVVGEIKRARNVFDGMVNGGVLP 310
G+ G++E+A +MK++ DVV+Y+T++ GF ++ A V MV G+ P
Sbjct: 424 GHCVTGKMEDAIAVLEDMKEKGLSPDVVSYSTVLSGFCRSYDVDEALRVKREMVEKGIKP 483
Query: 311 SVATYNAMIQVLCKKDSVENAILVFEEMVGKGYMPNSTTYNVVIRGLCHTGEMERALEFV 370
TY+++IQ C++ + A ++EEM+ G P+ TY +I C G++E+AL+
Sbjct: 484 DTITYSSLIQGFCEQRRTKEACDLYEEMLRVGLPPDEFTYTALINAYCMEGDLEKALQLH 543
Query: 371 GRMKDDECEPNVQTYNILIRYFCDAGEIERGLELFEKMGSGVCLPNLDTYNILISS 426
M + P+V TY++LI L K+ +P+ TY+ LI +
Sbjct: 544 NEMVEKGVLPDVVTYSVLINGLNKQSRTREAKRLLLKLFYEESVPSDVTYHTLIEN 599
Score = 135 bits (339), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 76/297 (25%), Positives = 153/297 (51%), Gaps = 16/297 (5%)
Query: 128 RMKSLSLGPTQKTFAIIAERYVSAGKADRAVKIFLSMHEHGCRQSLNSFNTILDLLCKEK 187
+M+ L P ++T+ + + + G + A ++ M+++G S+ ++N +++ C
Sbjct: 370 QMRVRGLCPNERTYTTLVDGFSQKGYMNEAYRVLREMNDNGFSPSVVTYNALINGHCVTG 429
Query: 188 KVEKAYNLFKVFRGK-FKADVISYNVIANGWCLVKRTNKALEVLKEMVDRGLNPNLTTYN 246
K+E A + + + K DV+SY+ + +G+C ++AL V +EMV++G+ P+ TY+
Sbjct: 430 KMEDAIAVLEDMKEKGLSPDVVSYSTVLSGFCRSYDVDEALRVKREMVEKGIKPDTITYS 489
Query: 247 IVLKGYFRAGQIEEAWRFFLEMKKRKCEIDVVTYTTIVHGFGVVGEIKRARNVFDGMVNG 306
+++G+ + +EA + EM + D TYT +++ + + G++++A + + MV
Sbjct: 490 SLIQGFCEQRRTKEACDLYEEMLRVGLPPDEFTYTALINAYCMEGDLEKALQLHNEMVEK 549
Query: 307 GVLPSVATYNAMIQVLCKKDSVENAILVFEEMVGKGYMPNSTTYNVVI------------ 354
GVLP V TY+ +I L K+ A + ++ + +P+ TY+ +I
Sbjct: 550 GVLPDVVTYSVLINGLNKQSRTREAKRLLLKLFYEESVPSDVTYHTLIENCSNIEFKSVV 609
Query: 355 ---RGLCHTGEMERALEFVGRMKDDECEPNVQTYNILIRYFCDAGEIERGLELFEKM 408
+G C G M A + M +P+ YNI+I C AG+I + L+++M
Sbjct: 610 SLIKGFCMKGMMTEADQVFESMLGKNHKPDGTAYNIMIHGHCRAGDIRKAYTLYKEM 666
Score = 83.6 bits (205), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 73/372 (19%), Positives = 149/372 (40%), Gaps = 56/372 (15%)
Query: 62 CPSLHWTPQLVDQIIKRLW-NHALKALHFFNILSYHPTYAHSPSSFDHAIDLAARLRDYR 120
CP+ LVD ++ + N A + L N + P S +++ I+
Sbjct: 377 CPNERTYTTLVDGFSQKGYMNEAYRVLREMNDNGFSP----SVVTYNALINGHCVTGKME 432
Query: 121 TVWTLVHRMKSLSLGPTQKTFAIIAERYVSAGKADRAVKIFLSMHEHGCRQSLNSFNTIL 180
++ MK L P +++ + + + D A+++ M E G + ++++++
Sbjct: 433 DAIAVLEDMKEKGLSPDVVSYSTVLSGFCRSYDVDEALRVKREMVEKGIKPDTITYSSLI 492
Query: 181 DLLCKEKKVEKAYNLFK-VFRGKFKADVISYNVIANGWCLVKRTNKALEVLKEMVDRGLN 239
C++++ ++A +L++ + R D +Y + N +C+ KAL++ EMV++G+
Sbjct: 493 QGFCEQRRTKEACDLYEEMLRVGLPPDEFTYTALINAYCMEGDLEKALQLHNEMVEKGVL 552
Query: 240 PNLTTYNIVLKGYFRAGQIEEAWRFFLE-------------------------------- 267
P++ TY++++ G + + EA R L+
Sbjct: 553 PDVVTYSVLINGLNKQSRTREAKRLLLKLFYEESVPSDVTYHTLIENCSNIEFKSVVSLI 612
Query: 268 ----MKKRKCEIDVV--------------TYTTIVHGFGVVGEIKRARNVFDGMVNGGVL 309
MK E D V Y ++HG G+I++A ++ MV G L
Sbjct: 613 KGFCMKGMMTEADQVFESMLGKNHKPDGTAYNIMIHGHCRAGDIRKAYTLYKEMVKSGFL 672
Query: 310 PSVATYNAMIQVLCKKDSVENAILVFEEMVGKGYMPNSTTYNVVIRGLCHTGEMERALEF 369
T A+++ L K+ V V ++ + + V++ G M+ L+
Sbjct: 673 LHTVTVIALVKALHKEGKVNELNSVIVHVLRSCELSEAEQAKVLVEINHREGNMDVVLDV 732
Query: 370 VGRMKDDECEPN 381
+ M D PN
Sbjct: 733 LAEMAKDGFLPN 744
Score = 73.9 bits (180), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 53/249 (21%), Positives = 111/249 (44%), Gaps = 16/249 (6%)
Query: 117 RDYRTVWTLVHRMKSLSLGPTQKTFAIIAERYVSAGKADRAVKIFLSMHEHGCRQSLNSF 176
R + L M + L P + T+ + Y G ++A+++ M E G + ++
Sbjct: 499 RRTKEACDLYEEMLRVGLPPDEFTYTALINAYCMEGDLEKALQLHNEMVEKGVLPDVVTY 558
Query: 177 NTILDLLCKEKKVEKAYNLF-KVF-RGKFKADVISYNVIAN--------------GWCLV 220
+ +++ L K+ + +A L K+F +DV + +I N G+C+
Sbjct: 559 SVLINGLNKQSRTREAKRLLLKLFYEESVPSDVTYHTLIENCSNIEFKSVVSLIKGFCMK 618
Query: 221 KRTNKALEVLKEMVDRGLNPNLTTYNIVLKGYFRAGQIEEAWRFFLEMKKRKCEIDVVTY 280
+A +V + M+ + P+ T YNI++ G+ RAG I +A+ + EM K + VT
Sbjct: 619 GMMTEADQVFESMLGKNHKPDGTAYNIMIHGHCRAGDIRKAYTLYKEMVKSGFLLHTVTV 678
Query: 281 TTIVHGFGVVGEIKRARNVFDGMVNGGVLPSVATYNAMIQVLCKKDSVENAILVFEEMVG 340
+V G++ +V ++ L ++++ ++ +++ + V EM
Sbjct: 679 IALVKALHKEGKVNELNSVIVHVLRSCELSEAEQAKVLVEINHREGNMDVVLDVLAEMAK 738
Query: 341 KGYMPNSTT 349
G++PN +
Sbjct: 739 DGFLPNGIS 747
>sp|Q3EAF8|PP294_ARATH Pentatricopeptide repeat-containing protein At3g62540,
mitochondrial OS=Arabidopsis thaliana GN=At3g62540 PE=2
SV=1
Length = 599
Score = 176 bits (447), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 104/408 (25%), Positives = 211/408 (51%), Gaps = 6/408 (1%)
Query: 54 RTLTQTLHCPSLHWTPQLVDQIIKRLWNHALKALHFFNILSYHPTYAHSPSSFDHAIDLA 113
R + L L + L+ ++++R + A FF + +AH+ +++ + +
Sbjct: 146 RNMEAVLDEMKLDLSHDLIVEVLERFRHARKPAFRFFCWAAERQGFAHASRTYNSMMSIL 205
Query: 114 ARLRDYRTVWTLVHRMKSLSLGPTQKTFAIIAERYVSAGKADRAVKIFLSMHEHGCRQSL 173
A+ R + T+ +++ M + L T +TF I + + +A + +AV IF M ++ + +
Sbjct: 206 AKTRQFETMVSVLEEMGTKGL-LTMETFTIAMKAFAAAKERKKAVGIFELMKKYKFKIGV 264
Query: 174 NSFNTILDLLCKEKKVEKAYNLFKVFRGKFKADVISYNVIANGWCLVKRTNKALEVLKEM 233
+ N +LD L + K ++A LF + +F ++++Y V+ NGWC V+ +A + +M
Sbjct: 265 ETINCLLDSLGRAKLGKEAQVLFDKLKERFTPNMMTYTVLLNGWCRVRNLIEAARIWNDM 324
Query: 234 VDRGLNPNLTTYNIVLKGYFRAGQIEEAWRFFLEMKKRKCEIDVVTYTTIVHGFGVVGEI 293
+D GL P++ +N++L+G R+ + +A + F MK + +V +YT ++ F +
Sbjct: 325 IDHGLKPDIVAHNVMLEGLLRSMKKSDAIKLFHVMKSKGPCPNVRSYTIMIRDFCKQSSM 384
Query: 294 KRARNVFDGMVNGGVLPSVATYNAMIQVLCKKDSVENAILVFEEMVGKGYMPNSTTYNVV 353
+ A FD MV+ G+ P A Y +I + ++ + +EM KG+ P+ TYN +
Sbjct: 385 ETAIEYFDDMVDSGLQPDAAVYTCLITGFGTQKKLDTVYELLKEMQEKGHPPDGKTYNAL 444
Query: 354 IRGLCHTGEMERALEFVGRMKDDECEPNVQTYNILIRYFCDAGEIERGLELFEKM-GSGV 412
I+ + + E +M +E EP++ T+N++++ + A E G ++++M G+
Sbjct: 445 IKLMANQKMPEHGTRIYNKMIQNEIEPSIHTFNMIMKSYFVARNYEMGRAVWDEMIKKGI 504
Query: 413 CLPNLDTYNILISSMFVRKKSDDLLVAGKLLIEMVDRGFMPRKFTFNR 460
C P+ ++Y +LI + KS + A + L EM+D+G +N+
Sbjct: 505 C-PDDNSYTVLIRGLISEGKSRE---ACRYLEEMLDKGMKTPLIDYNK 548
Score = 81.6 bits (200), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 62/261 (23%), Positives = 109/261 (41%), Gaps = 1/261 (0%)
Query: 115 RLRDYRTVWTLVHRMKSLSLGPTQKTFAIIAERYVSAGKADRAVKIFLSMHEHGCRQSLN 174
R+R+ + + M L P ++ E + + K A+K+F M G ++
Sbjct: 310 RVRNLIEAARIWNDMIDHGLKPDIVAHNVMLEGLLRSMKKSDAIKLFHVMKSKGPCPNVR 369
Query: 175 SFNTILDLLCKEKKVEKAYNLFK-VFRGKFKADVISYNVIANGWCLVKRTNKALEVLKEM 233
S+ ++ CK+ +E A F + + D Y + G+ K+ + E+LKEM
Sbjct: 370 SYTIMIRDFCKQSSMETAIEYFDDMVDSGLQPDAAVYTCLITGFGTQKKLDTVYELLKEM 429
Query: 234 VDRGLNPNLTTYNIVLKGYFRAGQIEEAWRFFLEMKKRKCEIDVVTYTTIVHGFGVVGEI 293
++G P+ TYN ++K E R + +M + + E + T+ I+ + V
Sbjct: 430 QEKGHPPDGKTYNALIKLMANQKMPEHGTRIYNKMIQNEIEPSIHTFNMIMKSYFVARNY 489
Query: 294 KRARNVFDGMVNGGVLPSVATYNAMIQVLCKKDSVENAILVFEEMVGKGYMPNSTTYNVV 353
+ R V+D M+ G+ P +Y +I+ L + A EEM+ KG YN
Sbjct: 490 EMGRAVWDEMIKKGICPDDNSYTVLIRGLISEGKSREACRYLEEMLDKGMKTPLIDYNKF 549
Query: 354 IRGLCHTGEMERALEFVGRMK 374
G+ E E R K
Sbjct: 550 AADFHRGGQPEIFEELAQRAK 570
Score = 57.4 bits (137), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 44/160 (27%), Positives = 77/160 (48%), Gaps = 5/160 (3%)
Query: 307 GVLPSVATYNAMIQVLCKKDSVENAILVFEEMVGKGYMPNSTTYNVVIRGLCHTGEMERA 366
G + TYN+M+ +L K E + V EEM KG + T+ + ++ E ++A
Sbjct: 190 GFAHASRTYNSMMSILAKTRQFETMVSVLEEMGTKGLL-TMETFTIAMKAFAAAKERKKA 248
Query: 367 LEFVGRMKDDECEPNVQTYNILIRYFCDAGEIERGLELFEKMGSGVCLPNLDTYNILISS 426
+ MK + + V+T N L+ A + LF+K+ PN+ TY +L++
Sbjct: 249 VGIFELMKKYKFKIGVETINCLLDSLGRAKLGKEAQVLFDKLKERFT-PNMMTYTVLLNG 307
Query: 427 MFVRKKSDDLLVAGKLLIEMVDRGFMPRKFTFNRVLNGLL 466
+ R + +L+ A ++ +M+D G P N +L GLL
Sbjct: 308 -WCRVR--NLIEAARIWNDMIDHGLKPDIVAHNVMLEGLL 344
>sp|Q9CAN0|PPR99_ARATH Pentatricopeptide repeat-containing protein At1g63130,
mitochondrial OS=Arabidopsis thaliana GN=At1g63130 PE=2
SV=1
Length = 630
Score = 176 bits (447), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 114/432 (26%), Positives = 202/432 (46%), Gaps = 74/432 (17%)
Query: 124 TLVHRMKSLSLGPTQKTFAIIAERYVSAGKADRAVKIFLSMHEHGCRQSLNSFNTILDLL 183
+LV +M + P TF + +A AV + M GC+ L ++ +++ L
Sbjct: 172 SLVGQMVEMGYQPDSFTFNTLIHGLFRHNRASEAVALVDRMVVKGCQPDLVTYGIVVNGL 231
Query: 184 CKEKKVEKAYNLFKVF-RGKFKADVISYNVIANGWCLVKRTNKALEVLKEMVDRGLNPNL 242
CK ++ A +L K +GK + V+ YN I + C K N AL + EM ++G+ PN+
Sbjct: 232 CKRGDIDLALSLLKKMEQGKIEPGVVIYNTIIDALCNYKNVNDALNLFTEMDNKGIRPNV 291
Query: 243 TTYNIVLK-----------------------------------GYFRAGQIEEAWRFFLE 267
TYN +++ + + G++ EA + + E
Sbjct: 292 VTYNSLIRCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDE 351
Query: 268 MKKRKCEIDVVTYTTIVHGFGVVGEIKRARNVFDGMVNGGVLPSVATYNAMIQVLCKKDS 327
M KR + D+ TY+++++GF + + A+++F+ M++ P+V TYN +I+ CK
Sbjct: 352 MIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKR 411
Query: 328 V-----------------------------------ENAILVFEEMVGKGYMPNSTTYNV 352
V +NA +VF++MV G +P+ TY++
Sbjct: 412 VDEGMELFREMSQRGLVGNTVTYTTLIHGFFQARECDNAQIVFKQMVSDGVLPDIMTYSI 471
Query: 353 VIRGLCHTGEMERALEFVGRMKDDECEPNVQTYNILIRYFCDAGEIERGLELFEKMGSGV 412
++ GLC+ G++E AL ++ + EP++ TYNI+I C AG++E G +LF +
Sbjct: 472 LLDGLCNNGKVETALVVFEYLQRSKMEPDIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKG 531
Query: 413 CLPNLDTYNILISSMFVRKKSDDLLVAGKLLIEMVDRGFMPRKFTFNRVLNGLLLIGNQG 472
PN+ TY ++S F RK + A L EM + G +P T+N ++ L G++
Sbjct: 532 VKPNVVTYTTMMSG-FCRKGLKE--EADALFREMKEEGPLPDSGTYNTLIRAHLRDGDKA 588
Query: 473 LAKEILRLQSRC 484
+ E++R C
Sbjct: 589 ASAELIREMRSC 600
Score = 171 bits (434), Expect = 9e-42, Method: Compositional matrix adjust.
Identities = 106/378 (28%), Positives = 187/378 (49%), Gaps = 7/378 (1%)
Query: 106 FDHAIDLAARLRDYRTVWTLVHRMKSLSLGPTQKTFAIIAERYVSAGKADRAVKIFLSMH 165
++ ID ++ L M + + P T+ + + G+ A ++ M
Sbjct: 259 YNTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRCLCNYGRWSDASRLLSDMI 318
Query: 166 EHGCRQSLNSFNTILDLLCKEKKVEKAYNLF-KVFRGKFKADVISYNVIANGWCLVKRTN 224
E ++ +F+ ++D KE K+ +A L+ ++ + D+ +Y+ + NG+C+ R +
Sbjct: 319 ERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLD 378
Query: 225 KALEVLKEMVDRGLNPNLTTYNIVLKGYFRAGQIEEAWRFFLEMKKRKCEIDVVTYTTIV 284
+A + + M+ + PN+ TYN ++KG+ +A +++E F EM +R + VTYTT++
Sbjct: 379 EAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVDEGMELFREMSQRGLVGNTVTYTTLI 438
Query: 285 HGFGVVGEIKRARNVFDGMVNGGVLPSVATYNAMIQVLCKKDSVENAILVFEEMVGKGYM 344
HGF E A+ VF MV+ GVLP + TY+ ++ LC VE A++VFE +
Sbjct: 439 HGFFQARECDNAQIVFKQMVSDGVLPDIMTYSILLDGLCNNGKVETALVVFEYLQRSKME 498
Query: 345 PNSTTYNVVIRGLCHTGEMERALEFVGRMKDDECEPNVQTYNILIRYFCDAGEIERGLEL 404
P+ TYN++I G+C G++E + + +PNV TY ++ FC G E L
Sbjct: 499 PDIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPNVVTYTTMMSGFCRKGLKEEADAL 558
Query: 405 FEKMGSGVCLPNLDTYNILISSMFVRKKSDDLLVAGKLLIEMVDRGFMPRKFTFNRVLNG 464
F +M LP+ TYN LI + + D + +L+ EM F+ T V N
Sbjct: 559 FREMKEEGPLPDSGTYNTLIRAHL---RDGDKAASAELIREMRSCRFVGDASTIGLVTN- 614
Query: 465 LLLIGNQGLAKEILRLQS 482
++ + L K L++ S
Sbjct: 615 --MLHDGRLDKSFLKMLS 630
Score = 156 bits (394), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 105/404 (25%), Positives = 188/404 (46%), Gaps = 25/404 (6%)
Query: 102 SPSSFDHAI----DLAARLRDYRTVWTLVHRMKSLSLG---------------PTQKTFA 142
+P SF H D + DYR + ++R+ L L P+ F+
Sbjct: 28 APPSFSHCSFWVRDFSGVRYDYRKIS--INRLNDLKLDDAVNLFGDMVKSRPFPSIVEFS 85
Query: 143 IIAERYVSAGKADRAVKIFLSMHEHGCRQSLNSFNTILDLLCKEKKVEKAYN-LFKVFRG 201
+ K D + + M G +L +++ +++ C+ ++ A L K+ +
Sbjct: 86 KLLSAIAKMNKFDLVISLGEQMQNLGISHNLYTYSILINCFCRRSQLSLALAVLAKMMKL 145
Query: 202 KFKADVISYNVIANGWCLVKRTNKALEVLKEMVDRGLNPNLTTYNIVLKGYFRAGQIEEA 261
++ D+++ N + NG+C R + A+ ++ +MV+ G P+ T+N ++ G FR + EA
Sbjct: 146 GYEPDIVTLNSLLNGFCHGNRISDAVSLVGQMVEMGYQPDSFTFNTLIHGLFRHNRASEA 205
Query: 262 WRFFLEMKKRKCEIDVVTYTTIVHGFGVVGEIKRARNVFDGMVNGGVLPSVATYNAMIQV 321
M + C+ D+VTY +V+G G+I A ++ M G + P V YN +I
Sbjct: 206 VALVDRMVVKGCQPDLVTYGIVVNGLCKRGDIDLALSLLKKMEQGKIEPGVVIYNTIIDA 265
Query: 322 LCKKDSVENAILVFEEMVGKGYMPNSTTYNVVIRGLCHTGEMERALEFVGRMKDDECEPN 381
LC +V +A+ +F EM KG PN TYN +IR LC+ G A + M + + PN
Sbjct: 266 LCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRCLCNYGRWSDASRLLSDMIERKINPN 325
Query: 382 VQTYNILIRYFCDAGEIERGLELFEKMGSGVCLPNLDTYNILISSMFVRKKSDDLLVAGK 441
V T++ LI F G++ +L+++M P++ TY+ LI+ + + D+ A
Sbjct: 326 VVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDE---AKH 382
Query: 442 LLIEMVDRGFMPRKFTFNRVLNGLLLIGNQGLAKEILRLQSRCG 485
+ M+ + P T+N ++ G E+ R S+ G
Sbjct: 383 MFELMISKDCFPNVVTYNTLIKGFCKAKRVDEGMELFREMSQRG 426
>sp|Q9LEQ7|PP382_ARATH Pentatricopeptide repeat-containing protein At5g14820,
mitochondrial OS=Arabidopsis thaliana GN=At5g14820 PE=2
SV=1
Length = 598
Score = 176 bits (446), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 104/408 (25%), Positives = 210/408 (51%), Gaps = 6/408 (1%)
Query: 54 RTLTQTLHCPSLHWTPQLVDQIIKRLWNHALKALHFFNILSYHPTYAHSPSSFDHAIDLA 113
R + L L + L+ ++++R + A FF + +AH +++ + +
Sbjct: 145 RNMEAVLDEMKLDLSHDLIVEVLERFRHARKPAFRFFCWAAERQGFAHDSRTYNSMMSIL 204
Query: 114 ARLRDYRTVWTLVHRMKSLSLGPTQKTFAIIAERYVSAGKADRAVKIFLSMHEHGCRQSL 173
A+ R + T+ +++ M + L T +TF I + + +A + +AV IF M ++ + +
Sbjct: 205 AKTRQFETMVSVLEEMGTKGL-LTMETFTIAMKAFAAAKERKKAVGIFELMKKYKFKIGV 263
Query: 174 NSFNTILDLLCKEKKVEKAYNLFKVFRGKFKADVISYNVIANGWCLVKRTNKALEVLKEM 233
+ N +LD L + K ++A LF + +F ++++Y V+ NGWC V+ +A + +M
Sbjct: 264 ETINCLLDSLGRAKLGKEAQVLFDKLKERFTPNMMTYTVLLNGWCRVRNLIEAARIWNDM 323
Query: 234 VDRGLNPNLTTYNIVLKGYFRAGQIEEAWRFFLEMKKRKCEIDVVTYTTIVHGFGVVGEI 293
+D GL P++ +N++L+G R+ + +A + F MK + +V +YT ++ F +
Sbjct: 324 IDHGLKPDIVAHNVMLEGLLRSMKKSDAIKLFHVMKSKGPCPNVRSYTIMIRDFCKQSSM 383
Query: 294 KRARNVFDGMVNGGVLPSVATYNAMIQVLCKKDSVENAILVFEEMVGKGYMPNSTTYNVV 353
+ A FD MV+ G+ P A Y +I + ++ + +EM KG+ P+ TYN +
Sbjct: 384 ETAIEYFDDMVDSGLQPDAAVYTCLITGFGTQKKLDTVYELLKEMQEKGHPPDGKTYNAL 443
Query: 354 IRGLCHTGEMERALEFVGRMKDDECEPNVQTYNILIRYFCDAGEIERGLELFEKM-GSGV 412
I+ + + E +M +E EP++ T+N++++ + A E G ++++M G+
Sbjct: 444 IKLMANQKMPEHGTRIYNKMIQNEIEPSIHTFNMIMKSYFVARNYEMGRAVWDEMIKKGI 503
Query: 413 CLPNLDTYNILISSMFVRKKSDDLLVAGKLLIEMVDRGFMPRKFTFNR 460
C P+ ++Y +LI + KS + A + L EM+D+G +N+
Sbjct: 504 C-PDDNSYTVLIRGLISEGKSRE---ACRYLEEMLDKGMKTPLIDYNK 547
Score = 81.6 bits (200), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 62/261 (23%), Positives = 109/261 (41%), Gaps = 1/261 (0%)
Query: 115 RLRDYRTVWTLVHRMKSLSLGPTQKTFAIIAERYVSAGKADRAVKIFLSMHEHGCRQSLN 174
R+R+ + + M L P ++ E + + K A+K+F M G ++
Sbjct: 309 RVRNLIEAARIWNDMIDHGLKPDIVAHNVMLEGLLRSMKKSDAIKLFHVMKSKGPCPNVR 368
Query: 175 SFNTILDLLCKEKKVEKAYNLFK-VFRGKFKADVISYNVIANGWCLVKRTNKALEVLKEM 233
S+ ++ CK+ +E A F + + D Y + G+ K+ + E+LKEM
Sbjct: 369 SYTIMIRDFCKQSSMETAIEYFDDMVDSGLQPDAAVYTCLITGFGTQKKLDTVYELLKEM 428
Query: 234 VDRGLNPNLTTYNIVLKGYFRAGQIEEAWRFFLEMKKRKCEIDVVTYTTIVHGFGVVGEI 293
++G P+ TYN ++K E R + +M + + E + T+ I+ + V
Sbjct: 429 QEKGHPPDGKTYNALIKLMANQKMPEHGTRIYNKMIQNEIEPSIHTFNMIMKSYFVARNY 488
Query: 294 KRARNVFDGMVNGGVLPSVATYNAMIQVLCKKDSVENAILVFEEMVGKGYMPNSTTYNVV 353
+ R V+D M+ G+ P +Y +I+ L + A EEM+ KG YN
Sbjct: 489 EMGRAVWDEMIKKGICPDDNSYTVLIRGLISEGKSREACRYLEEMLDKGMKTPLIDYNKF 548
Query: 354 IRGLCHTGEMERALEFVGRMK 374
G+ E E R K
Sbjct: 549 AADFHRGGQPEIFEELAQRAK 569
Score = 57.0 bits (136), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 43/153 (28%), Positives = 75/153 (49%), Gaps = 5/153 (3%)
Query: 314 TYNAMIQVLCKKDSVENAILVFEEMVGKGYMPNSTTYNVVIRGLCHTGEMERALEFVGRM 373
TYN+M+ +L K E + V EEM KG + T+ + ++ E ++A+ M
Sbjct: 196 TYNSMMSILAKTRQFETMVSVLEEMGTKGLL-TMETFTIAMKAFAAAKERKKAVGIFELM 254
Query: 374 KDDECEPNVQTYNILIRYFCDAGEIERGLELFEKMGSGVCLPNLDTYNILISSMFVRKKS 433
K + + V+T N L+ A + LF+K+ PN+ TY +L++ + R +
Sbjct: 255 KKYKFKIGVETINCLLDSLGRAKLGKEAQVLFDKLKERFT-PNMMTYTVLLNG-WCRVR- 311
Query: 434 DDLLVAGKLLIEMVDRGFMPRKFTFNRVLNGLL 466
+L+ A ++ +M+D G P N +L GLL
Sbjct: 312 -NLIEAARIWNDMIDHGLKPDIVAHNVMLEGLL 343
>sp|Q9T0D6|PP306_ARATH Pentatricopeptide repeat-containing protein At4g11690
OS=Arabidopsis thaliana GN=At4g11690 PE=2 SV=1
Length = 566
Score = 176 bits (446), Expect = 4e-43, Method: Compositional matrix adjust.
Identities = 110/365 (30%), Positives = 182/365 (49%), Gaps = 10/365 (2%)
Query: 106 FDHAIDLAARL------RDYRTVWTLVHRMKSLSLGPTQ-KTFAIIAERYVSAGKADRAV 158
F HA L ++ + T +L+H + T+ + + +I YV + + ++
Sbjct: 55 FSHAQSLLLQVISGKIHSQFFTSSSLLHYLTESETSKTKFRLYEVIINSYVQSQSLNLSI 114
Query: 159 KIFLSMHEHGCRQSLNSFNTILDLLCKEKKVEKAYNLFKVFRGKFKADVISYNVIANGWC 218
F M ++G N FN +L + + ++ F + K DV S+ ++ G C
Sbjct: 115 SYFNEMVDNGFVPGSNCFNYLLTFVVGSSSFNQWWSFFNENKSKVVLDVYSFGILIKGCC 174
Query: 219 LVKRTNKALEVLKEMVDRGLNPNLTTYNIVLKGYFRAGQIEEAWRFFLEMKKRKCEIDVV 278
K+ ++L E+ + G +PN+ Y ++ G + G+IE+A F EM K +
Sbjct: 175 EAGEIEKSFDLLIELTEFGFSPNVVIYTTLIDGCCKKGEIEKAKDLFFEMGKLGLVANER 234
Query: 279 TYTTIVHGFGVVGEIKRARNVFDGMVNGGVLPSVATYNAMIQVLCKKDSVENAILVFEEM 338
TYT +++G G K+ +++ M GV P++ TYN ++ LCK ++A VF+EM
Sbjct: 235 TYTVLINGLFKNGVKKQGFEMYEKMQEDGVFPNLYTYNCVMNQLCKDGRTKDAFQVFDEM 294
Query: 339 VGKGYMPNSTTYNVVIRGLCHTGEMERALEFVGRMKDDECEPNVQTYNILIRYFCDAGEI 398
+G N TYN +I GLC ++ A + V +MK D PN+ TYN LI FC G++
Sbjct: 295 RERGVSCNIVTYNTLIGGLCREMKLNEANKVVDQMKSDGINPNLITYNTLIDGFCGVGKL 354
Query: 399 ERGLELFEKMGSGVCLPNLDTYNILISSMFVRKKSDDLLVAGKLLIEMVDRGFMPRKFTF 458
+ L L + S P+L TYNIL+S F RK D A K++ EM +RG P K T+
Sbjct: 355 GKALSLCRDLKSRGLSPSLVTYNILVSG-FCRK--GDTSGAAKMVKEMEERGIKPSKVTY 411
Query: 459 NRVLN 463
+++
Sbjct: 412 TILID 416
Score = 171 bits (433), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 101/367 (27%), Positives = 179/367 (48%), Gaps = 6/367 (1%)
Query: 90 FNILSYHPTYAHSPSS--FDHAIDLAARLRDYRTVWTLVHRMKSLSLGPTQKTFAIIAER 147
F++L + SP+ + ID + + L M L L ++T+ ++
Sbjct: 183 FDLLIELTEFGFSPNVVIYTTLIDGCCKKGEIEKAKDLFFEMGKLGLVANERTYTVLING 242
Query: 148 YVSAGKADRAVKIFLSMHEHGCRQSLNSFNTILDLLCKEKKVEKAYNLFKVFRGK-FKAD 206
G + +++ M E G +L ++N +++ LCK+ + + A+ +F R + +
Sbjct: 243 LFKNGVKKQGFEMYEKMQEDGVFPNLYTYNCVMNQLCKDGRTKDAFQVFDEMRERGVSCN 302
Query: 207 VISYNVIANGWCLVKRTNKALEVLKEMVDRGLNPNLTTYNIVLKGYFRAGQIEEAWRFFL 266
+++YN + G C + N+A +V+ +M G+NPNL TYN ++ G+ G++ +A
Sbjct: 303 IVTYNTLIGGLCREMKLNEANKVVDQMKSDGINPNLITYNTLIDGFCGVGKLGKALSLCR 362
Query: 267 EMKKRKCEIDVVTYTTIVHGFGVVGEIKRARNVFDGMVNGGVLPSVATYNAMIQVLCKKD 326
++K R +VTY +V GF G+ A + M G+ PS TY +I + D
Sbjct: 363 DLKSRGLSPSLVTYNILVSGFCRKGDTSGAAKMVKEMEERGIKPSKVTYTILIDTFARSD 422
Query: 327 SVENAILVFEEMVGKGYMPNSTTYNVVIRGLCHTGEMERALEFVGRMKDDECEPNVQTYN 386
++E AI + M G +P+ TY+V+I G C G+M A M + CEPN YN
Sbjct: 423 NMEKAIQLRLSMEELGLVPDVHTYSVLIHGFCIKGQMNEASRLFKSMVEKNCEPNEVIYN 482
Query: 387 ILIRYFCDAGEIERGLELFEKMGSGVCLPNLDTYNILISSMFVRKKSDDLLVAGKLLIEM 446
+I +C G R L+L ++M PN+ +Y +I + +KS + A +L+ +M
Sbjct: 483 TMILGYCKEGSSYRALKLLKEMEEKELAPNVASYRYMIEVLCKERKSKE---AERLVEKM 539
Query: 447 VDRGFMP 453
+D G P
Sbjct: 540 IDSGIDP 546
Score = 124 bits (311), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 70/239 (29%), Positives = 127/239 (53%), Gaps = 1/239 (0%)
Query: 153 KADRAVKIFLSMHEHGCRQSLNSFNTILDLLCKEKKVEKAYNLFKVFRGK-FKADVISYN 211
K + A K+ M G +L ++NT++D C K+ KA +L + + + +++YN
Sbjct: 318 KLNEANKVVDQMKSDGINPNLITYNTLIDGFCGVGKLGKALSLCRDLKSRGLSPSLVTYN 377
Query: 212 VIANGWCLVKRTNKALEVLKEMVDRGLNPNLTTYNIVLKGYFRAGQIEEAWRFFLEMKKR 271
++ +G+C T+ A +++KEM +RG+ P+ TY I++ + R+ +E+A + L M++
Sbjct: 378 ILVSGFCRKGDTSGAAKMVKEMEERGIKPSKVTYTILIDTFARSDNMEKAIQLRLSMEEL 437
Query: 272 KCEIDVVTYTTIVHGFGVVGEIKRARNVFDGMVNGGVLPSVATYNAMIQVLCKKDSVENA 331
DV TY+ ++HGF + G++ A +F MV P+ YN MI CK+ S A
Sbjct: 438 GLVPDVHTYSVLIHGFCIKGQMNEASRLFKSMVEKNCEPNEVIYNTMILGYCKEGSSYRA 497
Query: 332 ILVFEEMVGKGYMPNSTTYNVVIRGLCHTGEMERALEFVGRMKDDECEPNVQTYNILIR 390
+ + +EM K PN +Y +I LC + + A V +M D +P+ +++ R
Sbjct: 498 LKLLKEMEEKELAPNVASYRYMIEVLCKERKSKEAERLVEKMIDSGIDPSTSILSLISR 556
>sp|Q9FX35|PP117_ARATH Pentatricopeptide repeat-containing protein At1g73400,
mitochondrial OS=Arabidopsis thaliana GN=At1g73400 PE=2
SV=2
Length = 568
Score = 176 bits (445), Expect = 4e-43, Method: Compositional matrix adjust.
Identities = 119/433 (27%), Positives = 211/433 (48%), Gaps = 31/433 (7%)
Query: 56 LTQTLHCPSLHWTPQLVDQIIKRLWNHALKALHFFNILSYHPTYAHSPSSFDHAIDLAA- 114
+ + L S+ T +V +I++RL A FF + Y+H P +++ ID+ +
Sbjct: 112 MEKALDESSVDLTTPVVCKILQRLQYEEKTAFRFFTWAGHQEHYSHEPIAYNEMIDILSS 171
Query: 115 ---RLRDYRTVWTLVHRMKSLSLGPTQKTFAII----------AERYVS-AGKADRAVKI 160
+ + +R V ++ MK KT ++ ERY++ K + +I
Sbjct: 172 TKYKNKQFRIVIDMLDYMKR-----NNKTVVLVDVLLEILRKYCERYLTHVQKFAKRKRI 226
Query: 161 FLSMHEHGCRQSLNSFNTILDLLCKEKKVEKAYNLFKVFRGKFKADVISYNVIANGWCLV 220
+ + +N+FN +LD LCK V++ L + R + K D ++NV+ GWC V
Sbjct: 227 RVKT-----QPEINAFNMLLDALCKCGLVKEGEALLRRMRHRVKPDANTFNVLFFGWCRV 281
Query: 221 KRTNKALEVLKEMVDRGLNPNLTTYNIVLKGYFRAGQIEEAWRFFLEMKKRKCEIDVVTY 280
+ KA+++L+EM++ G P TY + + +AG ++EA F M + + T
Sbjct: 282 RDPKKAMKLLEEMIEAGHKPENFTYCAAIDTFCQAGMVDEAADLFDFMITKGSAVSAPTA 341
Query: 281 TTIVHGFGVVGEIKRARNVFD---GMVNGGVLPSVATYNAMIQVLCKKDSVENAILVFEE 337
T + + +A F+ M++ G LP V+TY +I+ +C + V+ A +E
Sbjct: 342 KTFALMIVALAKNDKAEECFELIGRMISTGCLPDVSTYKDVIEGMCMAEKVDEAYKFLDE 401
Query: 338 MVGKGYMPNSTTYNVVIRGLCHTGEMERALEFVGRMKDDECEPNVQTYNILIRYFCDAGE 397
M KGY P+ TYN +R LC + + AL+ GRM + C P+VQTYN+LI F + +
Sbjct: 402 MSNKGYPPDIVTYNCFLRVLCENRKTDEALKLYGRMVESRCAPSVQTYNMLISMFFEMDD 461
Query: 398 IERGLELFEKMGSGVCLPNLDTYNILISSMFVRKKSDDLLVAGKLLIEMVDRGFMPRKFT 457
+ + +M C+ +++TY +I+ +F ++ + A LL E+V++G
Sbjct: 462 PDGAFNTWTEMDKRDCVQDVETYCAMINGLFDCHRAKE---ACFLLEEVVNKGLKLPYRV 518
Query: 458 FNRVLNGLLLIGN 470
F+ L L +GN
Sbjct: 519 FDSFLMRLSEVGN 531
Score = 38.9 bits (89), Expect = 0.095, Method: Compositional matrix adjust.
Identities = 28/119 (23%), Positives = 57/119 (47%), Gaps = 1/119 (0%)
Query: 153 KADRAVKIFLSMHEHGCRQSLNSFNTILDLLCKEKKVEKAYNLF-KVFRGKFKADVISYN 211
K D A+K++ M E C S+ ++N ++ + + + A+N + ++ + DV +Y
Sbjct: 426 KTDEALKLYGRMVESRCAPSVQTYNMLISMFFEMDDPDGAFNTWTEMDKRDCVQDVETYC 485
Query: 212 VIANGWCLVKRTNKALEVLKEMVDRGLNPNLTTYNIVLKGYFRAGQIEEAWRFFLEMKK 270
+ NG R +A +L+E+V++GL ++ L G ++ + MKK
Sbjct: 486 AMINGLFDCHRAKEACFLLEEVVNKGLKLPYRVFDSFLMRLSEVGNLKAIHKVSEHMKK 544
>sp|Q9SUD8|PP340_ARATH Pentatricopeptide repeat-containing protein At4g28010
OS=Arabidopsis thaliana GN=At4g28010 PE=2 SV=1
Length = 704
Score = 175 bits (444), Expect = 6e-43, Method: Compositional matrix adjust.
Identities = 117/387 (30%), Positives = 191/387 (49%), Gaps = 20/387 (5%)
Query: 96 HPTYAHSPSSFDHAIDLAARL--------------RDYRTVWTLVHRMKSLSLGPTQKTF 141
+P ++ S F A+D + L R++ ++ +M +
Sbjct: 51 NPQLKNAVSVFQQAVDSGSSLAFAGNNLMAKLVRSRNHELAFSFYRKMLETDTFINFVSL 110
Query: 142 AIIAERYVSAGKADRAVKIFLSMHEHGCRQSLNSFNTILDLLCKEKKVEKAYNLFKVFR- 200
+ + E YV K A + M + G ++ + N +L LC+ + KA +L + R
Sbjct: 111 SGLLECYVQMRKTGFAFGVLALMLKRGFAFNVYNHNILLKGLCRNLECGKAVSLLREMRR 170
Query: 201 GKFKADVISYNVIANGWCLVKRTNKALEVLKEMVDRGLNPNLTTYNIVLKGYFRAGQIEE 260
DV SYN + G+C K KALE+ EM G + +L T+ I++ + +AG+++E
Sbjct: 171 NSLMPDVFSYNTVIRGFCEGKELEKALELANEMKGSGCSWSLVTWGILIDAFCKAGKMDE 230
Query: 261 AWRFFLEMKKRKCEIDVVTYTTIVHGFGVVGEIKRARNVFDGMVNGGVLPSVATYNAMIQ 320
A F EMK E D+V YT+++ GF GE+ R + +FD ++ G P TYN +I+
Sbjct: 231 AMGFLKEMKFMGLEADLVVYTSLIRGFCDCGELDRGKALFDEVLERGDSPCAITYNTLIR 290
Query: 321 VLCKKDSVENAILVFEEMVGKGYMPNSTTYNVVIRGLCHTGEMERALEFVGRMKDDECEP 380
CK ++ A +FE M+ +G PN TY +I GLC G+ + AL+ + M + + EP
Sbjct: 291 GFCKLGQLKEASEIFEFMIERGVRPNVYTYTGLIDGLCGVGKTKEALQLLNLMIEKDEEP 350
Query: 381 NVQTYNILIRYFCDAGEIERGLELFEKMGSGVCLPNLDTYNILISSMFVRKKSDDLLVAG 440
N TYNI+I C G + +E+ E M P+ TYNIL+ + + DL A
Sbjct: 351 NAVTYNIIINKLCKDGLVADAVEIVELMKKRRTRPDNITYNILLGGLCAKG---DLDEAS 407
Query: 441 KLLIEMV-DRGFM-PRKFTFNRVLNGL 465
KLL M+ D + P ++N +++GL
Sbjct: 408 KLLYLMLKDSSYTDPDVISYNALIHGL 434
Score = 144 bits (363), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 116/478 (24%), Positives = 208/478 (43%), Gaps = 80/478 (16%)
Query: 90 FNILSYHPTYAHSPSSFDHAIDLAARLRDYRT--VWTLVHRMKSLSLGPTQKTFAIIAER 147
F +L+ + + ++H I L R+ +L+ M+ SL P ++ +
Sbjct: 127 FGVLALMLKRGFAFNVYNHNILLKGLCRNLECGKAVSLLREMRRNSLMPDVFSYNTVIRG 186
Query: 148 YVSAGKADRAVKIFLSMHEHGCRQSLNSFNTILDLLCKEKKVEKAYNLFKV--FRGKFKA 205
+ + ++A+++ M GC SL ++ ++D CK K+++A K F G +A
Sbjct: 187 FCEGKELEKALELANEMKGSGCSWSLVTWGILIDAFCKAGKMDEAMGFLKEMKFMG-LEA 245
Query: 206 DVISYNVIANGWCLVKRTNKALEVLKEMVDRGLNPNLTTYNIVLKGYFRAGQIEEAWRFF 265
D++ Y + G+C ++ + E+++RG +P TYN +++G+ + GQ++EA F
Sbjct: 246 DLVVYTSLIRGFCDCGELDRGKALFDEVLERGDSPCAITYNTLIRGFCKLGQLKEASEIF 305
Query: 266 LEMKKRKCEIDVVTYTTIVHGFGVVGEIKRARNVFDGMVNGGVLPSVATYNAMIQVLCKK 325
M +R +V TYT ++ G VG+ K A + + M+ P+ TYN +I LCK
Sbjct: 306 EFMIERGVRPNVYTYTGLIDGLCGVGKTKEALQLLNLMIEKDEEPNAVTYNIIINKLCKD 365
Query: 326 DSVENAILVFEEMVGKGYMPNSTTYNVVIRGLCHTGEMERALEFVGRMKDDEC--EPNVQ 383
V +A+ + E M + P++ TYN+++ GLC G+++ A + + M D +P+V
Sbjct: 366 GLVADAVEIVELMKKRRTRPDNITYNILLGGLCAKGDLDEASKLLYLMLKDSSYTDPDVI 425
Query: 384 TYNILIRYFCD-----------------------------------AGEIERGLELFEKM 408
+YN LI C AG++ + +EL++++
Sbjct: 426 SYNALIHGLCKENRLHQALDIYDLLVEKLGAGDRVTTNILLNSTLKAGDVNKAMELWKQI 485
Query: 409 GSGVCLPNLDTY-----------------------------------NILISSMFVRKKS 433
+ N DTY N L+SS+ K
Sbjct: 486 SDSKIVRNSDTYTAMIDGFCKTGMLNVAKGLLCKMRVSELQPSVFDYNCLLSSLC---KE 542
Query: 434 DDLLVAGKLLIEMVDRGFMPRKFTFNRVLNGLLLIGNQGLAKEILRLQSRCGRLPRQF 491
L A +L EM P +FN +++G L G+ A+ +L SR G P F
Sbjct: 543 GSLDQAWRLFEEMQRDNNFPDVVSFNIMIDGSLKAGDIKSAESLLVGMSRAGLSPDLF 600
Score = 117 bits (292), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 89/349 (25%), Positives = 165/349 (47%), Gaps = 7/349 (2%)
Query: 136 PTQKTFAIIAERYVSAGKADRAVKIFLSMHEHGCRQSLNSFNTILDLLCKEKKVEKAYNL 195
P T+ II + G AV+I M + R ++N +L LC + +++A L
Sbjct: 350 PNAVTYNIIINKLCKDGLVADAVEIVELMKKRRTRPDNITYNILLGGLCAKGDLDEASKL 409
Query: 196 FKVF---RGKFKADVISYNVIANGWCLVKRTNKALEVLKEMVDRGLNPNLTTYNIVLKGY 252
+ DVISYN + +G C R ++AL++ +V++ + T NI+L
Sbjct: 410 LYLMLKDSSYTDPDVISYNALIHGLCKENRLHQALDIYDLLVEKLGAGDRVTTNILLNST 469
Query: 253 FRAGQIEEAWRFFLEMKKRKCEIDVVTYTTIVHGFGVVGEIKRARNVFDGMVNGGVLPSV 312
+AG + +A + ++ K + TYT ++ GF G + A+ + M + PSV
Sbjct: 470 LKAGDVNKAMELWKQISDSKIVRNSDTYTAMIDGFCKTGMLNVAKGLLCKMRVSELQPSV 529
Query: 313 ATYNAMIQVLCKKDSVENAILVFEEMVGKGYMPNSTTYNVVIRGLCHTGEMERALEFVGR 372
YN ++ LCK+ S++ A +FEEM P+ ++N++I G G+++ A +
Sbjct: 530 FDYNCLLSSLCKEGSLDQAWRLFEEMQRDNNFPDVVSFNIMIDGSLKAGDIKSAESLLVG 589
Query: 373 MKDDECEPNVQTYNILIRYFCDAGEIERGLELFEKMGSGVCLPNLDTYNILISSMFVRKK 432
M P++ TY+ LI F G ++ + F+KM P+ + ++ + +
Sbjct: 590 MSRAGLSPDLFTYSKLINRFLKLGYLDEAISFFDKMVDSGFEPDAHICDSVLKYCISQGE 649
Query: 433 SDDLLVAGKLLIEMVDRGFMPRKFTFNRVLNGLL-LIGNQGLAKEILRL 480
+D L +L+ ++VD+ + K V++ + N LAK +LR+
Sbjct: 650 TDKLT---ELVKKLVDKDIVLDKELTCTVMDYMCNSSANMDLAKRLLRV 695
Score = 101 bits (251), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 82/325 (25%), Positives = 146/325 (44%), Gaps = 40/325 (12%)
Query: 157 AVKIFLSMHEHGCRQSLNSFNTILDLLCKEKKVEKAYNLF-KVFRGKFKADVISYNVIAN 215
AV +F + G + + N ++ L + + E A++ + K+ + +S + +
Sbjct: 57 AVSVFQQAVDSGSSLAF-AGNNLMAKLVRSRNHELAFSFYRKMLETDTFINFVSLSGLLE 115
Query: 216 GWCLVKRTNKALEVLKEMVDRGLNPNLTTYNIVLKGYFRAGQIEEAWRFFLEMKKRKCEI 275
+ +++T A VL M+ RG N+ +NI+LKG R + +A EM++
Sbjct: 116 CYVQMRKTGFAFGVLALMLKRGFAFNVYNHNILLKGLCRNLECGKAVSLLREMRR----- 170
Query: 276 DVVTYTTIVHGFGVVGEIKRARNVFDGMVNGGVLPSVATYNAMIQVLCKKDSVENAILVF 335
++P V +YN +I+ C+ +E A+ +
Sbjct: 171 ------------------------------NSLMPDVFSYNTVIRGFCEGKELEKALELA 200
Query: 336 EEMVGKGYMPNSTTYNVVIRGLCHTGEMERALEFVGRMKDDECEPNVQTYNILIRYFCDA 395
EM G G + T+ ++I C G+M+ A+ F+ MK E ++ Y LIR FCD
Sbjct: 201 NEMKGSGCSWSLVTWGILIDAFCKAGKMDEAMGFLKEMKFMGLEADLVVYTSLIRGFCDC 260
Query: 396 GEIERGLELFEKMGSGVCLPNLDTYNILISSMFVRKKSDDLLVAGKLLIEMVDRGFMPRK 455
GE++RG LF+++ P TYN LI K L A ++ M++RG P
Sbjct: 261 GELDRGKALFDEVLERGDSPCAITYNTLIRGFC---KLGQLKEASEIFEFMIERGVRPNV 317
Query: 456 FTFNRVLNGLLLIGNQGLAKEILRL 480
+T+ +++GL +G A ++L L
Sbjct: 318 YTYTGLIDGLCGVGKTKEALQLLNL 342
Score = 71.2 bits (173), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 56/289 (19%), Positives = 132/289 (45%), Gaps = 4/289 (1%)
Query: 94 SYHPTYAHSPSSFDHAIDLAARLRDYRTVWTLVHRMKSLSLGPTQKTFAIIAERYVSAGK 153
SY S ++ H + RL ++ L+ ++ L G + T I+ + AG
Sbjct: 418 SYTDPDVISYNALIHGLCKENRLHQALDIYDLL--VEKLGAGD-RVTTNILLNSTLKAGD 474
Query: 154 ADRAVKIFLSMHEHGCRQSLNSFNTILDLLCKEKKVEKAYNLFKVFR-GKFKADVISYNV 212
++A++++ + + ++ +++ ++D CK + A L R + + V YN
Sbjct: 475 VNKAMELWKQISDSKIVRNSDTYTAMIDGFCKTGMLNVAKGLLCKMRVSELQPSVFDYNC 534
Query: 213 IANGWCLVKRTNKALEVLKEMVDRGLNPNLTTYNIVLKGYFRAGQIEEAWRFFLEMKKRK 272
+ + C ++A + +EM P++ ++NI++ G +AG I+ A + M +
Sbjct: 535 LLSSLCKEGSLDQAWRLFEEMQRDNNFPDVVSFNIMIDGSLKAGDIKSAESLLVGMSRAG 594
Query: 273 CEIDVVTYTTIVHGFGVVGEIKRARNVFDGMVNGGVLPSVATYNAMIQVLCKKDSVENAI 332
D+ TY+ +++ F +G + A + FD MV+ G P +++++ + +
Sbjct: 595 LSPDLFTYSKLINRFLKLGYLDEAISFFDKMVDSGFEPDAHICDSVLKYCISQGETDKLT 654
Query: 333 LVFEEMVGKGYMPNSTTYNVVIRGLCHTGEMERALEFVGRMKDDECEPN 381
+ +++V K + + V+ +C++ + + R+ DD+ E +
Sbjct: 655 ELVKKLVDKDIVLDKELTCTVMDYMCNSSANMDLAKRLLRVTDDKEERD 703
>sp|Q9FMF6|PP444_ARATH Pentatricopeptide repeat-containing protein At5g64320,
mitochondrial OS=Arabidopsis thaliana GN=At5g64320 PE=2
SV=1
Length = 730
Score = 173 bits (438), Expect = 4e-42, Method: Compositional matrix adjust.
Identities = 106/360 (29%), Positives = 185/360 (51%), Gaps = 6/360 (1%)
Query: 108 HAIDLAARLRDYRTVWTLVHRMKSLSLGPTQKTFAIIAERYVSAGKADRAVKIFLSMHEH 167
H RL D + V L + S + P T+ + Y G A+++ M
Sbjct: 361 HGFVTHGRLDDAKAV--LSDMVTSYGIVPDVCTYNSLIYGYWKEGLVGLALEVLHDMRNK 418
Query: 168 GCRQSLNSFNTILDLLCKEKKVEKAYNLFKVFRGK-FKADVISYNVIANGWCLVKRTNKA 226
GC+ ++ S+ ++D CK K+++AYN+ K + + +N + + +C R +A
Sbjct: 419 GCKPNVYSYTILVDGFCKLGKIDEAYNVLNEMSADGLKPNTVGFNCLISAFCKEHRIPEA 478
Query: 227 LEVLKEMVDRGLNPNLTTYNIVLKGYFRAGQIEEAWRFFLEMKKRKCEIDVVTYTTIVHG 286
+E+ +EM +G P++ T+N ++ G +I+ A +M + VTY T+++
Sbjct: 479 VEIFREMPRKGCKPDVYTFNSLISGLCEVDEIKHALWLLRDMISEGVVANTVTYNTLINA 538
Query: 287 FGVVGEIKRARNVFDGMVNGGVLPSVATYNAMIQVLCKKDSVENAILVFEEMVGKGYMPN 346
F GEIK AR + + MV G TYN++I+ LC+ V+ A +FE+M+ G+ P+
Sbjct: 539 FLRRGEIKEARKLVNEMVFQGSPLDEITYNSLIKGLCRAGEVDKARSLFEKMLRDGHAPS 598
Query: 347 STTYNVVIRGLCHTGEMERALEFVGRMKDDECEPNVQTYNILIRYFCDAGEIERGLELFE 406
+ + N++I GLC +G +E A+EF M P++ T+N LI C AG IE GL +F
Sbjct: 599 NISCNILINGLCRSGMVEEAVEFQKEMVLRGSTPDIVTFNSLINGLCRAGRIEDGLTMFR 658
Query: 407 KMGSGVCLPNLDTYNILISSMFVRKKSDDLLVAGKLLIEMVDRGFMPRKFTFNRVLNGLL 466
K+ + P+ T+N L+S + K + A LL E ++ GF+P T++ +L ++
Sbjct: 659 KLQAEGIPPDTVTFNTLMSWLC---KGGFVYDACLLLDEGIEDGFVPNHRTWSILLQSII 715
Score = 170 bits (430), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 89/311 (28%), Positives = 163/311 (52%), Gaps = 1/311 (0%)
Query: 125 LVHRMKSLSLGPTQKTFAIIAERYVSAGKADRAVKIFLSMHEHGCRQSLNSFNTILDLLC 184
++H M++ P ++ I+ + + GK D A + M G + + FN ++ C
Sbjct: 411 VLHDMRNKGCKPNVYSYTILVDGFCKLGKIDEAYNVLNEMSADGLKPNTVGFNCLISAFC 470
Query: 185 KEKKVEKAYNLFKVF-RGKFKADVISYNVIANGWCLVKRTNKALEVLKEMVDRGLNPNLT 243
KE ++ +A +F+ R K DV ++N + +G C V AL +L++M+ G+ N
Sbjct: 471 KEHRIPEAVEIFREMPRKGCKPDVYTFNSLISGLCEVDEIKHALWLLRDMISEGVVANTV 530
Query: 244 TYNIVLKGYFRAGQIEEAWRFFLEMKKRKCEIDVVTYTTIVHGFGVVGEIKRARNVFDGM 303
TYN ++ + R G+I+EA + EM + +D +TY +++ G GE+ +AR++F+ M
Sbjct: 531 TYNTLINAFLRRGEIKEARKLVNEMVFQGSPLDEITYNSLIKGLCRAGEVDKARSLFEKM 590
Query: 304 VNGGVLPSVATYNAMIQVLCKKDSVENAILVFEEMVGKGYMPNSTTYNVVIRGLCHTGEM 363
+ G PS + N +I LC+ VE A+ +EMV +G P+ T+N +I GLC G +
Sbjct: 591 LRDGHAPSNISCNILINGLCRSGMVEEAVEFQKEMVLRGSTPDIVTFNSLINGLCRAGRI 650
Query: 364 ERALEFVGRMKDDECEPNVQTYNILIRYFCDAGEIERGLELFEKMGSGVCLPNLDTYNIL 423
E L +++ + P+ T+N L+ + C G + L ++ +PN T++IL
Sbjct: 651 EDGLTMFRKLQAEGIPPDTVTFNTLMSWLCKGGFVYDACLLLDEGIEDGFVPNHRTWSIL 710
Query: 424 ISSMFVRKKSD 434
+ S+ ++ D
Sbjct: 711 LQSIIPQETLD 721
Score = 159 bits (403), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 112/438 (25%), Positives = 200/438 (45%), Gaps = 46/438 (10%)
Query: 87 LHFFNILSYHPTYAHSPSSFDHAIDLAARLRDYRTVWTLVHRMKSLSLGPTQKTFAIIAE 146
L N+ S PT+ S++ +++ ++ + + M S + PT TF ++ +
Sbjct: 170 LEMRNVYSCEPTF----KSYNVVLEILVSGNCHKVAANVFYDMLSRKIPPTLFTFGVVMK 225
Query: 147 RYVSAGKADRAVKIFLSMHEHGCRQSLNSFNTILDLLCKEKKVEKAYNLFK-VFRGKFKA 205
+ + + D A+ + M +HGC + + T++ L K +V +A L + +F
Sbjct: 226 AFCAVNEIDSALSLLRDMTKHGCVPNSVIYQTLIHSLSKCNRVNEALQLLEEMFLMGCVP 285
Query: 206 DVISYNVIANGWCLVKRTNKALEVLKEMVDRGLNPNLTTYNIVLKGYFRAGQIEEAWRFF 265
D ++N + G C R N+A +++ M+ RG P+ TY ++ G + G+++ A F
Sbjct: 286 DAETFNDVILGLCKFDRINEAAKMVNRMLIRGFAPDDITYGYLMNGLCKIGRVDAAKDLF 345
Query: 266 LEMKKRKCEIDVVTYTTIVHGFGVVGEIKRARNVFDGMVNG-GVLPSVATYNAMIQVLCK 324
+ K ++V + T++HGF G + A+ V MV G++P V TYN++I K
Sbjct: 346 YRIPKP----EIVIFNTLIHGFVTHGRLDDAKAVLSDMVTSYGIVPDVCTYNSLIYGYWK 401
Query: 325 KDSVENAILVFEEMVGKGYMPNSTTYNVVIRGLCHTGEMERALEFVGRMKDDECEPNVQT 384
+ V A+ V +M KG PN +Y +++ G C G+++ A + M D +PN
Sbjct: 402 EGLVGLALEVLHDMRNKGCKPNVYSYTILVDGFCKLGKIDEAYNVLNEMSADGLKPNTVG 461
Query: 385 YNILIRYFCDAGEIERGLELFEKMGSGVCLPNLDTYNILISSM----------------- 427
+N LI FC I +E+F +M C P++ T+N LIS +
Sbjct: 462 FNCLISAFCKEHRIPEAVEIFREMPRKGCKPDVYTFNSLISGLCEVDEIKHALWLLRDMI 521
Query: 428 -----------------FVRKKSDDLLVAGKLLIEMVDRGFMPRKFTFNRVLNGLLLIGN 470
F+R+ ++ A KL+ EMV +G + T+N ++ GL G
Sbjct: 522 SEGVVANTVTYNTLINAFLRRG--EIKEARKLVNEMVFQGSPLDEITYNSLIKGLCRAGE 579
Query: 471 QGLAKEILRLQSRCGRLP 488
A+ + R G P
Sbjct: 580 VDKARSLFEKMLRDGHAP 597
Score = 132 bits (331), Expect = 8e-30, Method: Compositional matrix adjust.
Identities = 99/414 (23%), Positives = 176/414 (42%), Gaps = 37/414 (8%)
Query: 86 ALHFFNILSYHPTYAHSPSSFDHAIDLAARLRDYRTVWTLVHRMKSLSLGPTQKTFAIIA 145
++ F+ Y HS + I +++T+ L+ +MK + + F I
Sbjct: 94 SMELFSWTGSQNGYRHSFDVYQVLIGKLGANGEFKTIDRLLIQMKDEGIVFKESLFISIM 153
Query: 146 ERYVSAGKADRAVKIFLSMHE-HGCRQSLNSFNTILDLLCKEKKVEKAYNLF-KVFRGKF 203
Y AG + ++ L M + C + S+N +L++L + A N+F + K
Sbjct: 154 RDYDKAGFPGQTTRLMLEMRNVYSCEPTFKSYNVVLEILVSGNCHKVAANVFYDMLSRKI 213
Query: 204 KADVISYNVIANGWCLVKRTNKALEVLKEMVDRGLNPNLTTYNIVLKGYFRAGQIEEAWR 263
+ ++ V+ +C V + AL +L++M G PN Y ++ + ++ EA +
Sbjct: 214 PPTLFTFGVVMKAFCAVNEIDSALSLLRDMTKHGCVPNSVIYQTLIHSLSKCNRVNEALQ 273
Query: 264 FFLEMKKRKCEIDVVTYTTIVHGFGVVGEIKRARNVFDGMVNGGVLPSVATYNAMIQVLC 323
EM C D T+ ++ G I A + + M+ G P TY ++ LC
Sbjct: 274 LLEEMFLMGCVPDAETFNDVILGLCKFDRINEAAKMVNRMLIRGFAPDDITYGYLMNGLC 333
Query: 324 KKDSVENA-----------ILVFEEMV---------------------GKGYMPNSTTYN 351
K V+ A I++F ++ G +P+ TYN
Sbjct: 334 KIGRVDAAKDLFYRIPKPEIVIFNTLIHGFVTHGRLDDAKAVLSDMVTSYGIVPDVCTYN 393
Query: 352 VVIRGLCHTGEMERALEFVGRMKDDECEPNVQTYNILIRYFCDAGEIERGLELFEKMGSG 411
+I G G + ALE + M++ C+PNV +Y IL+ FC G+I+ + +M +
Sbjct: 394 SLIYGYWKEGLVGLALEVLHDMRNKGCKPNVYSYTILVDGFCKLGKIDEAYNVLNEMSAD 453
Query: 412 VCLPNLDTYNILISSMFVRKKSDDLLVAGKLLIEMVDRGFMPRKFTFNRVLNGL 465
PN +N LIS+ K + A ++ EM +G P +TFN +++GL
Sbjct: 454 GLKPNTVGFNCLISAFC---KEHRIPEAVEIFREMPRKGCKPDVYTFNSLISGL 504
Score = 110 bits (276), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 78/331 (23%), Positives = 146/331 (44%), Gaps = 39/331 (11%)
Query: 73 DQIIKRLWNHALKALHFFNILSYHPTYAHSPSSFDHAI--DLAARLRDYRTVWTLVHRMK 130
+ +I W L L +L P+ + + I D +L + +++ M
Sbjct: 393 NSLIYGYWKEGLVGLAL-EVLHDMRNKGCKPNVYSYTILVDGFCKLGKIDEAYNVLNEMS 451
Query: 131 SLSLGPTQKTFAIIAERYVSAGKADRAVKIFLSMHEHGCRQSLNSFNTILDLLCKEKKVE 190
+ L P F + + + AV+IF M GC+ + +FN+++ LC+ +++
Sbjct: 452 ADGLKPNTVGFNCLISAFCKEHRIPEAVEIFREMPRKGCKPDVYTFNSLISGLCEVDEIK 511
Query: 191 KA------------------YN-LFKVF--RGKFKA---------------DVISYNVIA 214
A YN L F RG+ K D I+YN +
Sbjct: 512 HALWLLRDMISEGVVANTVTYNTLINAFLRRGEIKEARKLVNEMVFQGSPLDEITYNSLI 571
Query: 215 NGWCLVKRTNKALEVLKEMVDRGLNPNLTTYNIVLKGYFRAGQIEEAWRFFLEMKKRKCE 274
G C +KA + ++M+ G P+ + NI++ G R+G +EEA F EM R
Sbjct: 572 KGLCRAGEVDKARSLFEKMLRDGHAPSNISCNILINGLCRSGMVEEAVEFQKEMVLRGST 631
Query: 275 IDVVTYTTIVHGFGVVGEIKRARNVFDGMVNGGVLPSVATYNAMIQVLCKKDSVENAILV 334
D+VT+ ++++G G I+ +F + G+ P T+N ++ LCK V +A L+
Sbjct: 632 PDIVTFNSLINGLCRAGRIEDGLTMFRKLQAEGIPPDTVTFNTLMSWLCKGGFVYDACLL 691
Query: 335 FEEMVGKGYMPNSTTYNVVIRGLCHTGEMER 365
+E + G++PN T++++++ + ++R
Sbjct: 692 LDEGIEDGFVPNHRTWSILLQSIIPQETLDR 722
>sp|O04504|PPR27_ARATH Pentatricopeptide repeat-containing protein At1g09820
OS=Arabidopsis thaliana GN=At1g09820 PE=2 SV=1
Length = 606
Score = 171 bits (433), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 101/302 (33%), Positives = 172/302 (56%), Gaps = 12/302 (3%)
Query: 175 SFNTILDLLCKEKKVEKAYNLF---KVFRGKFKADVISYNVIANGWCLVK---RTNKALE 228
+FN +++ LCK K+ KA ++ KV+ +V+SYN + +G+C + + KA
Sbjct: 225 TFNVVINALCKTGKMNKARDVMEDMKVY--GCSPNVVSYNTLIDGYCKLGGNGKMYKADA 282
Query: 229 VLKEMVDRGLNPNLTTYNIVLKGYFRAGQIEEAWRFFLEMKKRKCEIDVVTYTTIVHGFG 288
VLKEMV+ ++PNLTT+NI++ G+++ + + + F EM + + +V++Y ++++G
Sbjct: 283 VLKEMVENDVSPNLTTFNILIDGFWKDDNLPGSMKVFKEMLDQDVKPNVISYNSLINGLC 342
Query: 289 VVGEIKRARNVFDGMVNGGVLPSVATYNAMIQVLCKKDSVENAILVFEEMVGKGYMPNST 348
G+I A ++ D MV+ GV P++ TYNA+I CK D ++ A+ +F + G+G +P +
Sbjct: 343 NGGKISEAISMRDKMVSAGVQPNLITYNALINGFCKNDMLKEALDMFGSVKGQGAVPTTR 402
Query: 349 TYNVVIRGLCHTGEMERALEFVGRMKDDECEPNVQTYNILIRYFCDAGEIERGLELFEKM 408
YN++I C G+++ M+ + P+V TYN LI C G IE +LF+++
Sbjct: 403 MYNMLIDAYCKLGKIDDGFALKEEMEREGIVPDVGTYNCLIAGLCRNGNIEAAKKLFDQL 462
Query: 409 GSGVCLPNLDTYNILISSMFVRKKSDDLLVAGKLLIEMVDRGFMPRKFTFNRVLNGLLLI 468
S LP+L T++IL+ + +S A LL EM G PR T+N V+ G
Sbjct: 463 TSK-GLPDLVTFHILMEGYCRKGESRK---AAMLLKEMSKMGLKPRHLTYNIVMKGYCKE 518
Query: 469 GN 470
GN
Sbjct: 519 GN 520
Score = 154 bits (389), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 126/502 (25%), Positives = 227/502 (45%), Gaps = 49/502 (9%)
Query: 20 RGLSPLTTTSPAPLPPAAADPAALASLI-----------LTSTDPRTLTQTLHCPSLH-- 66
R S +T + +P PP D A +A LI +T +P L + L L
Sbjct: 24 RLCSSSSTITGSPCPPRY-DVAVIADLIEKQHWSKLGVHVTDINPNELFRQLISSELDPD 82
Query: 67 -------WTPQLVD-----QIIKRLWNHALKALHFFNILSYHPTYAHSPSSFD-HAIDLA 113
W + D ++ +L + A + I S+ + + S H+I A
Sbjct: 83 LCLRYYSWLVKNSDISVSLELTFKLLHSLANAKRYSKIRSFLDGFVRNGSDHQVHSIFHA 142
Query: 114 ARLRDYRTVWTLVHRMKSLSLGPTQKTFAIIAERYVSAGKADRAVKIFLSMHEHGCRQSL 173
+ D V +++ M L+ Y + + + + F +G + S
Sbjct: 143 ISMCDNVCVNSIIADMLVLA--------------YANNSRFELGFEAFKRSGYYGYKLSA 188
Query: 174 NSFNTILDLLCKEKKVEKAYNLFK-VFRGKFKADVISYNVIANGWCLVKRTNKALEVLKE 232
S ++ L KE + ++K + R K + +V ++NV+ N C + NKA +V+++
Sbjct: 189 LSCKPLMIALLKENRSADVEYVYKEMIRRKIQPNVFTFNVVINALCKTGKMNKARDVMED 248
Query: 233 MVDRGLNPNLTTYNIVLKGYFR---AGQIEEAWRFFLEMKKRKCEIDVVTYTTIVHGFGV 289
M G +PN+ +YN ++ GY + G++ +A EM + ++ T+ ++ GF
Sbjct: 249 MKVYGCSPNVVSYNTLIDGYCKLGGNGKMYKADAVLKEMVENDVSPNLTTFNILIDGFWK 308
Query: 290 VGEIKRARNVFDGMVNGGVLPSVATYNAMIQVLCKKDSVENAILVFEEMVGKGYMPNSTT 349
+ + VF M++ V P+V +YN++I LC + AI + ++MV G PN T
Sbjct: 309 DDNLPGSMKVFKEMLDQDVKPNVISYNSLINGLCNGGKISEAISMRDKMVSAGVQPNLIT 368
Query: 350 YNVVIRGLCHTGEMERALEFVGRMKDDECEPNVQTYNILIRYFCDAGEIERGLELFEKMG 409
YN +I G C ++ AL+ G +K P + YN+LI +C G+I+ G L E+M
Sbjct: 369 YNALINGFCKNDMLKEALDMFGSVKGQGAVPTTRMYNMLIDAYCKLGKIDDGFALKEEME 428
Query: 410 SGVCLPNLDTYNILISSMFVRKKSDDLLVAGKLLIEMVDRGFMPRKFTFNRVLNGLLLIG 469
+P++ TYN LI+ + ++ ++ A KL ++ +G +P TF+ ++ G G
Sbjct: 429 REGIVPDVGTYNCLIAGLC---RNGNIEAAKKLFDQLTSKG-LPDLVTFHILMEGYCRKG 484
Query: 470 NQGLAKEILRLQSRCGRLPRQF 491
A +L+ S+ G PR
Sbjct: 485 ESRKAAMLLKEMSKMGLKPRHL 506
Score = 139 bits (350), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 91/370 (24%), Positives = 180/370 (48%), Gaps = 27/370 (7%)
Query: 91 NILSYHPTYAHSPS--SFDHAIDLAARLRDYRTVW---TLVHRMKSLSLGPTQKTFAIIA 145
+++ Y SP+ S++ ID +L ++ ++ M + P TF I+
Sbjct: 244 DVMEDMKVYGCSPNVVSYNTLIDGYCKLGGNGKMYKADAVLKEMVENDVSPNLTTFNILI 303
Query: 146 ERYVSAGKADRAVKIFLSMHEHGCRQSLNSFNTILDLLCKEKKVEKAYNLF-KVFRGKFK 204
+ + ++K+F M + + ++ S+N++++ LC K+ +A ++ K+ +
Sbjct: 304 DGFWKDDNLPGSMKVFKEMLDQDVKPNVISYNSLINGLCNGGKISEAISMRDKMVSAGVQ 363
Query: 205 ADVISYNVIANGWCLVKRTNKALEVLKEMVDRGLNPNLTTYNIVLKGYFRAGQIEEAWRF 264
++I+YN + NG+C +AL++ + +G P YN+++ Y + G+I++ +
Sbjct: 364 PNLITYNALINGFCKNDMLKEALDMFGSVKGQGAVPTTRMYNMLIDAYCKLGKIDDGFAL 423
Query: 265 FLEMKKRKCEIDVVTYTTIVHGFGVVGEIKRARNVFDGMVNGGVLPSVATYNAMIQVLCK 324
EM++ DV TY ++ G G I+ A+ +FD + + G LP + T++ +++ C+
Sbjct: 424 KEEMEREGIVPDVGTYNCLIAGLCRNGNIEAAKKLFDQLTSKG-LPDLVTFHILMEGYCR 482
Query: 325 KDSVENAILVFEEMVGKGYMPNSTTYNVVIRGLCHTGEMERALEFVGRM-KDDECEPNVQ 383
K A ++ +EM G P TYN+V++G C G ++ A +M K+ NV
Sbjct: 483 KGESRKAAMLLKEMSKMGLKPRHLTYNIVMKGYCKEGNLKAATNMRTQMEKERRLRMNVA 542
Query: 384 TYNILIRYFCDAGEIERGLELFEKMGSGVCLPNLDTYNILISSMFVRKKSDDLLVAGKLL 443
+YN+L++ + G++E L +M +PN TY I+
Sbjct: 543 SYNVLLQGYSQKGKLEDANMLLNEMLEKGLVPNRITYEIVKE------------------ 584
Query: 444 IEMVDRGFMP 453
EMVD+GF+P
Sbjct: 585 -EMVDQGFVP 593
Score = 107 bits (266), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 58/212 (27%), Positives = 108/212 (50%), Gaps = 17/212 (8%)
Query: 136 PTQKTFAIIAERYVSAGKADRAVKIFLSMHEHGCRQSLNSFNTILDLLCKEKKVEKAYNL 195
PT + + ++ + Y GK D + M G + ++N ++ LC+ +E A L
Sbjct: 399 PTTRMYNMLIDAYCKLGKIDDGFALKEEMEREGIVPDVGTYNCLIAGLCRNGNIEAAKKL 458
Query: 196 FKVFRGKFKADVISYNVIANGWCLVKRTNKALEVLKEMVDRGLNPNLTTYNIVLKGYFRA 255
F K D+++++++ G+C + KA +LKEM GL P TYNIV+KGY +
Sbjct: 459 FDQLTSKGLPDLVTFHILMEGYCRKGESRKAAMLLKEMSKMGLKPRHLTYNIVMKGYCKE 518
Query: 256 GQIEEAWRFFLEM-KKRKCEIDVVTYTTIVHGFGVVGEIKRARNVFDGMVNGGVLPSVAT 314
G ++ A +M K+R+ ++V +Y ++ G+ G+++ A + + M+ G++P+ T
Sbjct: 519 GNLKAATNMRTQMEKERRLRMNVASYNVLLQGYSQKGKLEDANMLLNEMLEKGLVPNRIT 578
Query: 315 YNAMIQVLCKKDSVENAILVFEEMVGKGYMPN 346
Y +V EEMV +G++P+
Sbjct: 579 YE----------------IVKEEMVDQGFVPD 594
>sp|Q9LUR2|PP238_ARATH Putative pentatricopeptide repeat-containing protein At3g16710,
mitochondrial OS=Arabidopsis thaliana GN=At3g16710 PE=3
SV=1
Length = 507
Score = 171 bits (433), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 125/484 (25%), Positives = 209/484 (43%), Gaps = 46/484 (9%)
Query: 48 LTSTDPRTLTQTLHCPSLHWTPQLVDQIIKRLWNHALKALHFFNILSYHPTYAHS---PS 104
L ++PRT C W +++ + L L F + L HS PS
Sbjct: 25 LQISNPRTAASLSLCGFCFWIRAFSSY--RKILRNGLHNLQFNDALDLFTRMVHSRPLPS 82
Query: 105 --SFDHAIDLAARLRDYRTVWTLVHRMKSLSLGPTQKTFAIIAERYVSAGKADRAVKIFL 162
F + + A++ Y V +L +M+ L + P T I+ + + RA
Sbjct: 83 IIDFTRLLSVIAKMNRYDVVISLFEQMQILGIPPLLCTCNIVMHCVCLSSQPCRASCFLG 142
Query: 163 SMHEHGCRQSLNSFNTILDLLCKEKKVEKAYNLFKVFRG-KFKADVISYNVIANGWCLVK 221
M + G L +F ++L+ C ++E A LF G FK +V++Y + C +
Sbjct: 143 KMMKLGFEPDLVTFTSLLNGYCHWNRIEDAIALFDQILGMGFKPNVVTYTTLIRCLCKNR 202
Query: 222 RTNKALEVLKEMVDRGLNPNLTTYNIVLKGYFRAGQIEEAWRFFLEMKKRKCEIDVVTYT 281
N A+E+ +M G PN+ TYN ++ G G+ +A +M KR+ E +V+T+T
Sbjct: 203 HLNHAVELFNQMGTNGSRPNVVTYNALVTGLCEIGRWGDAAWLLRDMMKRRIEPNVITFT 262
Query: 282 TIVHGFGVVGEIKRARNVFDGMVNGGVLPSVATYNAMIQVLC------------------ 323
++ F VG++ A+ +++ M+ V P V TY ++I LC
Sbjct: 263 ALIDAFVKVGKLMEAKELYNVMIQMSVYPDVFTYGSLINGLCMYGLLDEARQMFYLMERN 322
Query: 324 -----------------KKDSVENAILVFEEMVGKGYMPNSTTYNVVIRGLCHTGEMERA 366
K VE+ + +F EM KG + N+ TY V+I+G C G + A
Sbjct: 323 GCYPNEVIYTTLIHGFCKSKRVEDGMKIFYEMSQKGVVANTITYTVLIQGYCLVGRPDVA 382
Query: 367 LEFVGRMKDDECEPNVQTYNILIRYFCDAGEIERGLELFEKMGSGVCLPNLDTYNILISS 426
E +M P+++TYN+L+ C G++E+ L +FE M N+ TY I+I
Sbjct: 383 QEVFNQMSSRRAPPDIRTYNVLLDGLCCNGKVEKALMIFEYMRKREMDINIVTYTIIIQG 442
Query: 427 MFVRKKSDDLLVAGKLLIEMVDRGFMPRKFTFNRVLNGLLLIGNQGLAKEILRLQSRCGR 486
M K +D A L + +G P T+ +++G G A + + G
Sbjct: 443 MCKLGKVED---AFDLFCSLFSKGMKPNVITYTTMISGFCRRGLIHEADSLFKKMKEDGF 499
Query: 487 LPRQ 490
LP +
Sbjct: 500 LPNE 503
Score = 138 bits (348), Expect = 9e-32, Method: Compositional matrix adjust.
Identities = 87/345 (25%), Positives = 156/345 (45%), Gaps = 8/345 (2%)
Query: 80 WNHALKALHFFNI---LSYHPTYAHSPSSFDHAIDLAARLRDYRTVWTLVHRMKSLSLGP 136
WN A+ F+ + + P ++ I + R L ++M + P
Sbjct: 166 WNRIEDAIALFDQILGMGFKPNVV----TYTTLIRCLCKNRHLNHAVELFNQMGTNGSRP 221
Query: 137 TQKTFAIIAERYVSAGKADRAVKIFLSMHEHGCRQSLNSFNTILDLLCKEKKVEKAYNLF 196
T+ + G+ A + M + ++ +F ++D K K+ +A L+
Sbjct: 222 NVVTYNALVTGLCEIGRWGDAAWLLRDMMKRRIEPNVITFTALIDAFVKVGKLMEAKELY 281
Query: 197 KVF-RGKFKADVISYNVIANGWCLVKRTNKALEVLKEMVDRGLNPNLTTYNIVLKGYFRA 255
V + DV +Y + NG C+ ++A ++ M G PN Y ++ G+ ++
Sbjct: 282 NVMIQMSVYPDVFTYGSLINGLCMYGLLDEARQMFYLMERNGCYPNEVIYTTLIHGFCKS 341
Query: 256 GQIEEAWRFFLEMKKRKCEIDVVTYTTIVHGFGVVGEIKRARNVFDGMVNGGVLPSVATY 315
++E+ + F EM ++ + +TYT ++ G+ +VG A+ VF+ M + P + TY
Sbjct: 342 KRVEDGMKIFYEMSQKGVVANTITYTVLIQGYCLVGRPDVAQEVFNQMSSRRAPPDIRTY 401
Query: 316 NAMIQVLCKKDSVENAILVFEEMVGKGYMPNSTTYNVVIRGLCHTGEMERALEFVGRMKD 375
N ++ LC VE A+++FE M + N TY ++I+G+C G++E A + +
Sbjct: 402 NVLLDGLCCNGKVEKALMIFEYMRKREMDINIVTYTIIIQGMCKLGKVEDAFDLFCSLFS 461
Query: 376 DECEPNVQTYNILIRYFCDAGEIERGLELFEKMGSGVCLPNLDTY 420
+PNV TY +I FC G I LF+KM LPN Y
Sbjct: 462 KGMKPNVITYTTMISGFCRRGLIHEADSLFKKMKEDGFLPNESVY 506
Score = 87.8 bits (216), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 59/250 (23%), Positives = 110/250 (44%), Gaps = 3/250 (1%)
Query: 242 LTTYNIVLKGYFRAGQIEEAWRFFLEMKKRKCEIDVVTYTTIVHGFGVVGEIKRARNVFD 301
++Y +L+ Q +A F M + ++ +T ++ + ++F+
Sbjct: 48 FSSYRKILRNGLHNLQFNDALDLFTRMVHSRPLPSIIDFTRLLSVIAKMNRYDVVISLFE 107
Query: 302 GMVNGGVLPSVATYNAMIQVLCKKDSVENAILVFEEMVGKGYMPNSTTYNVVIRGLCHTG 361
M G+ P + T N ++ +C A +M+ G+ P+ T+ ++ G CH
Sbjct: 108 QMQILGIPPLLCTCNIVMHCVCLSSQPCRASCFLGKMMKLGFEPDLVTFTSLLNGYCHWN 167
Query: 362 EMERALEFVGRMKDDECEPNVQTYNILIRYFCDAGEIERGLELFEKMGSGVCLPNLDTYN 421
+E A+ ++ +PNV TY LIR C + +ELF +MG+ PN+ TYN
Sbjct: 168 RIEDAIALFDQILGMGFKPNVVTYTTLIRCLCKNRHLNHAVELFNQMGTNGSRPNVVTYN 227
Query: 422 ILISSMFVRKKSDDLLVAGKLLIEMVDRGFMPRKFTFNRVLNGLLLIGNQGLAKEILRLQ 481
L++ + + D A LL +M+ R P TF +++ + +G AKE+ +
Sbjct: 228 ALVTGLCEIGRWGD---AAWLLRDMMKRRIEPNVITFTALIDAFVKVGKLMEAKELYNVM 284
Query: 482 SRCGRLPRQF 491
+ P F
Sbjct: 285 IQMSVYPDVF 294
>sp|Q9CAN5|PPR98_ARATH Pentatricopeptide repeat-containing protein At1g63080,
mitochondrial OS=Arabidopsis thaliana GN=At1g63080 PE=2
SV=1
Length = 614
Score = 170 bits (431), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 101/361 (27%), Positives = 179/361 (49%), Gaps = 4/361 (1%)
Query: 106 FDHAIDLAARLRDYRTVWTLVHRMKSLSLGPTQKTFAIIAERYVSAGKADRAVKIFLSMH 165
+ ID + R L M + + P T++ + + G+ A ++ M
Sbjct: 243 YSTVIDSLCKYRHVDDALNLFTEMDNKGIRPDVFTYSSLISCLCNYGRWSDASRLLSDML 302
Query: 166 EHGCRQSLNSFNTILDLLCKEKKVEKAYNLF-KVFRGKFKADVISYNVIANGWCLVKRTN 224
E ++ +FN+++D KE K+ +A LF ++ + ++++YN + NG+C+ R +
Sbjct: 303 ERKINPNVVTFNSLIDAFAKEGKLIEAEKLFDEMIQRSIDPNIVTYNSLINGFCMHDRLD 362
Query: 225 KALEVLKEMVDRGLNPNLTTYNIVLKGYFRAGQIEEAWRFFLEMKKRKCEIDVVTYTTIV 284
+A ++ MV + P++ TYN ++ G+ +A ++ + F +M +R + VTYTT++
Sbjct: 363 EAQQIFTLMVSKDCLPDVVTYNTLINGFCKAKKVVDGMELFRDMSRRGLVGNTVTYTTLI 422
Query: 285 HGFGVVGEIKRARNVFDGMVNGGVLPSVATYNAMIQVLCKKDSVENAILVFEEMVGKGYM 344
HGF + A+ VF MV+ GV P++ TYN ++ LCK +E A++VFE +
Sbjct: 423 HGFFQASDCDNAQMVFKQMVSDGVHPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQKSKME 482
Query: 345 PNSTTYNVVIRGLCHTGEMERALEFVGRMKDDECEPNVQTYNILIRYFCDAGEIERGLEL 404
P+ TYN++ G+C G++E + + +P+V YN +I FC G E L
Sbjct: 483 PDIYTYNIMSEGMCKAGKVEDGWDLFCSLSLKGVKPDVIAYNTMISGFCKKGLKEEAYTL 542
Query: 405 FEKMGSGVCLPNLDTYNILISSMFVRKKSDDLLVAGKLLIEMVDRGFMPRKFTFNRVLNG 464
F KM LP+ TYN LI + + D + +L+ EM F T+ V +
Sbjct: 543 FIKMKEDGPLPDSGTYNTLIRAHL---RDGDKAASAELIKEMRSCRFAGDASTYGLVTDM 599
Query: 465 L 465
L
Sbjct: 600 L 600
Score = 162 bits (409), Expect = 8e-39, Method: Compositional matrix adjust.
Identities = 103/393 (26%), Positives = 181/393 (46%), Gaps = 42/393 (10%)
Query: 124 TLVHRMKSLSLGPTQKTFAIIAERYVSAGKADRAVKIFLSMHEHGCRQSLNSFNTILDLL 183
LV +M + P TF + KA AV + M GC+ L ++ +++ L
Sbjct: 156 ALVDQMVEMGYQPDTVTFTTLVHGLFQHNKASEAVALVERMVVKGCQPDLVTYGAVINGL 215
Query: 184 CKEKKVEKAYNLF-KVFRGKFKADVISYNVIANGWCLVKRTNKALEVLKEMVDRGLNPNL 242
CK + + A NL K+ +GK +ADV+ Y+ + + C + + AL + EM ++G+ P++
Sbjct: 216 CKRGEPDLALNLLNKMEKGKIEADVVIYSTVIDSLCKYRHVDDALNLFTEMDNKGIRPDV 275
Query: 243 TTYNIVLKGYFRAGQIEEAWRFFLEMKKRKCEIDVVTYTTIVHGFGVVGEIKRARNVFDG 302
TY+ ++ G+ +A R +M +RK +VVT+ +++ F G++ A +FD
Sbjct: 276 FTYSSLISCLCNYGRWSDASRLLSDMLERKINPNVVTFNSLIDAFAKEGKLIEAEKLFDE 335
Query: 303 MVNGGVLPSVATYNAMIQVLCKKDSVENAILVFEEMVGKGYMPNSTTYNVVIRGLCHTGE 362
M+ + P++ TYN++I C D ++ A +F MV K +P+ TYN +I G C +
Sbjct: 336 MIQRSIDPNIVTYNSLINGFCMHDRLDEAQQIFTLMVSKDCLPDVVTYNTLINGFCKAKK 395
Query: 363 MERALE---------FVG--------------------------RMKDDECEPNVQTYNI 387
+ +E VG +M D PN+ TYN
Sbjct: 396 VVDGMELFRDMSRRGLVGNTVTYTTLIHGFFQASDCDNAQMVFKQMVSDGVHPNIMTYNT 455
Query: 388 LIRYFCDAGEIERGLELFEKMGSGVCLPNLDTYNILISSMFVRKKSDDLLVAGKLLIEMV 447
L+ C G++E+ + +FE + P++ TYNI+ M K +D L +
Sbjct: 456 LLDGLCKNGKLEKAMVVFEYLQKSKMEPDIYTYNIMSEGMCKAGKVED---GWDLFCSLS 512
Query: 448 DRGFMPRKFTFNRVLNGLLLIGNQGLAKEILRL 480
+G P +N +++G +GL +E L
Sbjct: 513 LKGVKPDVIAYNTMISGFC---KKGLKEEAYTL 542
Score = 154 bits (388), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 104/381 (27%), Positives = 184/381 (48%), Gaps = 17/381 (4%)
Query: 106 FDHAIDLAARLRDYRTVWTLVHRMKSLSLGPTQKTFAIIAERYVSAGKADRAVKIFLSMH 165
D A+DL + R ++V K LS K F ++ +S G+ M
Sbjct: 46 LDEAVDLFGEMVKSRPFPSIVEFSKLLSAIAKMKKFDLV----ISFGE---------KME 92
Query: 166 EHGCRQSLNSFNTILDLLCKEKKVEKAYNLF-KVFRGKFKADVISYNVIANGWCLVKRTN 224
G +L ++N +++ LC+ ++ A + K+ + + +++ N + NG+C R +
Sbjct: 93 ILGVSHNLYTYNIMINCLCRRSQLSFALAILGKMMKLGYGPSIVTLNSLLNGFCHGNRIS 152
Query: 225 KALEVLKEMVDRGLNPNLTTYNIVLKGYFRAGQIEEAWRFFLEMKKRKCEIDVVTYTTIV 284
+A+ ++ +MV+ G P+ T+ ++ G F+ + EA M + C+ D+VTY ++
Sbjct: 153 EAVALVDQMVEMGYQPDTVTFTTLVHGLFQHNKASEAVALVERMVVKGCQPDLVTYGAVI 212
Query: 285 HGFGVVGEIKRARNVFDGMVNGGVLPSVATYNAMIQVLCKKDSVENAILVFEEMVGKGYM 344
+G GE A N+ + M G + V Y+ +I LCK V++A+ +F EM KG
Sbjct: 213 NGLCKRGEPDLALNLLNKMEKGKIEADVVIYSTVIDSLCKYRHVDDALNLFTEMDNKGIR 272
Query: 345 PNSTTYNVVIRGLCHTGEMERALEFVGRMKDDECEPNVQTYNILIRYFCDAGEIERGLEL 404
P+ TY+ +I LC+ G A + M + + PNV T+N LI F G++ +L
Sbjct: 273 PDVFTYSSLISCLCNYGRWSDASRLLSDMLERKINPNVVTFNSLIDAFAKEGKLIEAEKL 332
Query: 405 FEKMGSGVCLPNLDTYNILISSMFVRKKSDDLLVAGKLLIEMVDRGFMPRKFTFNRVLNG 464
F++M PN+ TYN LI+ + + D+ A ++ MV + +P T+N ++NG
Sbjct: 333 FDEMIQRSIDPNIVTYNSLINGFCMHDRLDE---AQQIFTLMVSKDCLPDVVTYNTLING 389
Query: 465 LLLIGNQGLAKEILRLQSRCG 485
E+ R SR G
Sbjct: 390 FCKAKKVVDGMELFRDMSRRG 410
Score = 125 bits (314), Expect = 8e-28, Method: Compositional matrix adjust.
Identities = 97/341 (28%), Positives = 155/341 (45%), Gaps = 12/341 (3%)
Query: 153 KADRAVKIFLSMHEHGCRQSLNSFNTILDLLCKEKKVEKAYNLFKVFRGKFKA-----DV 207
K D AV +F M + S+ F+ +L + K KK ++L F K + ++
Sbjct: 45 KLDEAVDLFGEMVKSRPFPSIVEFSKLLSAIAKMKK----FDLVISFGEKMEILGVSHNL 100
Query: 208 ISYNVIANGWCLVKRTNKALEVLKEMVDRGLNPNLTTYNIVLKGYFRAGQIEEAWRFFLE 267
+YN++ N C + + AL +L +M+ G P++ T N +L G+ +I EA +
Sbjct: 101 YTYNIMINCLCRRSQLSFALAILGKMMKLGYGPSIVTLNSLLNGFCHGNRISEAVALVDQ 160
Query: 268 MKKRKCEIDVVTYTTIVHGFGVVGEIKRARNVFDGMVNGGVLPSVATYNAMIQVLCKKDS 327
M + + D VT+TT+VHG + A + + MV G P + TY A+I LCK+
Sbjct: 161 MVEMGYQPDTVTFTTLVHGLFQHNKASEAVALVERMVVKGCQPDLVTYGAVINGLCKRGE 220
Query: 328 VENAILVFEEMVGKGYMPNSTTYNVVIRGLCHTGEMERALEFVGRMKDDECEPNVQTYNI 387
+ A+ + +M + Y+ VI LC ++ AL M + P+V TY+
Sbjct: 221 PDLALNLLNKMEKGKIEADVVIYSTVIDSLCKYRHVDDALNLFTEMDNKGIRPDVFTYSS 280
Query: 388 LIRYFCDAGEIERGLELFEKMGSGVCLPNLDTYNILISSMFVRKKSDDLLVAGKLLIEMV 447
LI C+ G L M PN+ T+N LI + K L+ A KL EM+
Sbjct: 281 LISCLCNYGRWSDASRLLSDMLERKINPNVVTFNSLIDAF---AKEGKLIEAEKLFDEMI 337
Query: 448 DRGFMPRKFTFNRVLNGLLLIGNQGLAKEILRLQSRCGRLP 488
R P T+N ++NG + A++I L LP
Sbjct: 338 QRSIDPNIVTYNSLINGFCMHDRLDEAQQIFTLMVSKDCLP 378
>sp|Q9LUJ4|PP248_ARATH Pentatricopeptide repeat-containing protein At3g22670,
mitochondrial OS=Arabidopsis thaliana GN=At3g22670 PE=2
SV=1
Length = 562
Score = 169 bits (428), Expect = 4e-41, Method: Compositional matrix adjust.
Identities = 112/422 (26%), Positives = 209/422 (49%), Gaps = 14/422 (3%)
Query: 68 TPQLVDQIIKRLWNHALKALHFFNILSYHPTYAHSPSSFDHAIDLAARLRDYRTVWTLVH 127
T LV Q+++R N +A FF + Y HS +++ +D+ + R++ +W LV+
Sbjct: 131 TESLVLQVLRRFSNGWNQAYGFFIWANSQTGYVHSGHTYNAMVDVLGKCRNFDLMWELVN 190
Query: 128 RMKSLSLGP--TQKTFAIIAERYVSAGKADRAVKIFLSMHE-HGCRQSLNSFNTILDLLC 184
M T T + + R +GK ++AV FL M + +G + + N+++D L
Sbjct: 191 EMNKNEESKLVTLDTMSKVMRRLAKSGKYNKAVDAFLEMEKSYGVKTDTIAMNSLMDALV 250
Query: 185 KEKKVEKAYNLFKVFRGKFKADVISYNVIANGWCLVKRTNKALEVLKEMVDRGLNPNLTT 244
KE +E A+ +F K D ++N++ +G+C ++ + A ++ M P++ T
Sbjct: 251 KENSIEHAHEVFLKLFDTIKPDARTFNILIHGFCKARKFDDARAMMDLMKVTEFTPDVVT 310
Query: 245 YNIVLKGYFRAGQIEEAWRFFLEMKKRKCEIDVVTYTTIVHGFGVVGEIKRARNVFDGMV 304
Y ++ Y + G EM++ C +VVTYT ++H G ++ A V++ M
Sbjct: 311 YTSFVEAYCKEGDFRRVNEMLEEMRENGCNPNVVTYTIVMHSLGKSKQVAEALGVYEKMK 370
Query: 305 NGGVLPSVATYNAMIQVLCKKDSVENAILVFEEMVGKGYMPNSTTYNVVIRGLCHTGEME 364
G +P Y+++I +L K ++A +FE+M +G + YN +I H E
Sbjct: 371 EDGCVPDAKFYSSLIHILSKTGRFKDAAEIFEDMTNQGVRRDVLVYNTMISAALHHSRDE 430
Query: 365 RALEFVGRMKDDE---CEPNVQTYNILIRYFCDAGEIE-RGLELFEKMGSGVCLPNLDTY 420
AL + RM+D+E C PNV+TY L++ C +++ G+ L + + V + ++ TY
Sbjct: 431 MALRLLKRMEDEEGESCSPNVETYAPLLKMCCHKKKMKLLGILLHHMVKNDVSI-DVSTY 489
Query: 421 NILISSMFVRKKSDDLLVAGKLLIEMVDRGFMPRKFTFNRVLNGLLLIGNQGLAKEILRL 480
+LI + + K ++ A E V +G +PR T +++ L + +A+ L++
Sbjct: 490 ILLIRGLCMSGKVEE---ACLFFEEAVRKGMVPRDSTCKMLVDEL---EKKNMAEAKLKI 543
Query: 481 QS 482
QS
Sbjct: 544 QS 545
>sp|Q9SR00|PP213_ARATH Pentatricopeptide repeat-containing protein At3g04760,
chloroplastic OS=Arabidopsis thaliana GN=At3g04760 PE=2
SV=1
Length = 602
Score = 169 bits (427), Expect = 7e-41, Method: Compositional matrix adjust.
Identities = 101/357 (28%), Positives = 177/357 (49%), Gaps = 13/357 (3%)
Query: 110 IDLAARLRDYRTVWTLVHRMKSLSLGPTQKTFAIIAERYVSAGKADRAVKIFLSMHEHGC 169
ID A R+ D RM+S P T+ I+ S GK D A+K+ + C
Sbjct: 174 IDDATRVLD---------RMRSKDFSPDTVTYNIMIGSLCSRGKLDLALKVLNQLLSDNC 224
Query: 170 RQSLNSFNTILDLLCKEKKVEKAYNLF-KVFRGKFKADVISYNVIANGWCLVKRTNKALE 228
+ ++ ++ +++ E V++A L ++ K D+ +YN I G C ++A E
Sbjct: 225 QPTVITYTILIEATMLEGGVDEALKLMDEMLSRGLKPDMFTYNTIIRGMCKEGMVDRAFE 284
Query: 229 VLKEMVDRGLNPNLTTYNIVLKGYFRAGQIEEAWRFFLEMKKRKCEIDVVTYTTIVHGFG 288
+++ + +G P++ +YNI+L+ G+ EE + +M KC+ +VVTY+ ++
Sbjct: 285 MVRNLELKGCEPDVISYNILLRALLNQGKWEEGEKLMTKMFSEKCDPNVVTYSILITTLC 344
Query: 289 VVGEIKRARNVFDGMVNGGVLPSVATYNAMIQVLCKKDSVENAILVFEEMVGKGYMPNST 348
G+I+ A N+ M G+ P +Y+ +I C++ ++ AI E M+ G +P+
Sbjct: 345 RDGKIEEAMNLLKLMKEKGLTPDAYSYDPLIAAFCREGRLDVAIEFLETMISDGCLPDIV 404
Query: 349 TYNVVIRGLCHTGEMERALEFVGRMKDDECEPNVQTYNILIRYFCDAGEIERGLELFEKM 408
YN V+ LC G+ ++ALE G++ + C PN +YN + +G+ R L + +M
Sbjct: 405 NYNTVLATLCKNGKADQALEIFGKLGEVGCSPNSSSYNTMFSALWSSGDKIRALHMILEM 464
Query: 409 GSGVCLPNLDTYNILISSMFVRKKSDDLLVAGKLLIEMVDRGFMPRKFTFNRVLNGL 465
S P+ TYN +IS + D+ A +LL++M F P T+N VL G
Sbjct: 465 MSNGIDPDEITYNSMISCLCREGMVDE---AFELLVDMRSCEFHPSVVTYNIVLLGF 518
Score = 162 bits (411), Expect = 5e-39, Method: Compositional matrix adjust.
Identities = 87/338 (25%), Positives = 172/338 (50%), Gaps = 4/338 (1%)
Query: 148 YVSAGKADRAVKIFLSMHEHGCRQSLNSFNTILDLLCKEKKVEKAYNLF-KVFRGKFKAD 206
+ + D A ++ M ++N ++ LC K++ A + ++ +
Sbjct: 168 FCKMNRIDDATRVLDRMRSKDFSPDTVTYNIMIGSLCSRGKLDLALKVLNQLLSDNCQPT 227
Query: 207 VISYNVIANGWCLVKRTNKALEVLKEMVDRGLNPNLTTYNIVLKGYFRAGQIEEAWRFFL 266
VI+Y ++ L ++AL+++ EM+ RGL P++ TYN +++G + G ++ A+
Sbjct: 228 VITYTILIEATMLEGGVDEALKLMDEMLSRGLKPDMFTYNTIIRGMCKEGMVDRAFEMVR 287
Query: 267 EMKKRKCEIDVVTYTTIVHGFGVVGEIKRARNVFDGMVNGGVLPSVATYNAMIQVLCKKD 326
++ + CE DV++Y ++ G+ + + M + P+V TY+ +I LC+
Sbjct: 288 NLELKGCEPDVISYNILLRALLNQGKWEEGEKLMTKMFSEKCDPNVVTYSILITTLCRDG 347
Query: 327 SVENAILVFEEMVGKGYMPNSTTYNVVIRGLCHTGEMERALEFVGRMKDDECEPNVQTYN 386
+E A+ + + M KG P++ +Y+ +I C G ++ A+EF+ M D C P++ YN
Sbjct: 348 KIEEAMNLLKLMKEKGLTPDAYSYDPLIAAFCREGRLDVAIEFLETMISDGCLPDIVNYN 407
Query: 387 ILIRYFCDAGEIERGLELFEKMGSGVCLPNLDTYNILISSMFVRKKSDDLLVAGKLLIEM 446
++ C G+ ++ LE+F K+G C PN +YN + S+++ S D + A +++EM
Sbjct: 408 TVLATLCKNGKADQALEIFGKLGEVGCSPNSSSYNTMFSALW---SSGDKIRALHMILEM 464
Query: 447 VDRGFMPRKFTFNRVLNGLLLIGNQGLAKEILRLQSRC 484
+ G P + T+N +++ L G A E+L C
Sbjct: 465 MSNGIDPDEITYNSMISCLCREGMVDEAFELLVDMRSC 502
Score = 151 bits (382), Expect = 9e-36, Method: Compositional matrix adjust.
Identities = 95/356 (26%), Positives = 167/356 (46%), Gaps = 37/356 (10%)
Query: 125 LVHRMKSLSLGPTQKTFAIIAERYVSAGKADRAVKIFLSMHEHGCRQSLNSFNTILDLLC 184
+++++ S + PT T+ I+ E + G D A+K+ M G + + ++NTI+ +C
Sbjct: 215 VLNQLLSDNCQPTVITYTILIEATMLEGGVDEALKLMDEMLSRGLKPDMFTYNTIIRGMC 274
Query: 185 KEKKVEKAYNLFKVFRGK-FKADVISYNVIANGWCLVKRTNKALEVLKEMVDRGLNPNLT 243
KE V++A+ + + K + DVISYN++ + + +++ +M +PN+
Sbjct: 275 KEGMVDRAFEMVRNLELKGCEPDVISYNILLRALLNQGKWEEGEKLMTKMFSEKCDPNVV 334
Query: 244 TYNIVLKGYFRAGQIEEAWRFFLEMKKRKCEIDVVTYTTIVHGFGVVGEIKRARNVFDGM 303
TY+I++ R G+IEEA MK++ D +Y ++ F G + A + M
Sbjct: 335 TYSILITTLCRDGKIEEAMNLLKLMKEKGLTPDAYSYDPLIAAFCREGRLDVAIEFLETM 394
Query: 304 VNGGVLPSVATYNAMIQVLCKKDSVENAILVFE--------------------------- 336
++ G LP + YN ++ LCK + A+ +F
Sbjct: 395 ISDGCLPDIVNYNTVLATLCKNGKADQALEIFGKLGEVGCSPNSSSYNTMFSALWSSGDK 454
Query: 337 --------EMVGKGYMPNSTTYNVVIRGLCHTGEMERALEFVGRMKDDECEPNVQTYNIL 388
EM+ G P+ TYN +I LC G ++ A E + M+ E P+V TYNI+
Sbjct: 455 IRALHMILEMMSNGIDPDEITYNSMISCLCREGMVDEAFELLVDMRSCEFHPSVVTYNIV 514
Query: 389 IRYFCDAGEIERGLELFEKMGSGVCLPNLDTYNILISSM-FVRKKSDDLLVAGKLL 443
+ FC A IE + + E M C PN TY +LI + F +++ + +A L+
Sbjct: 515 LLGFCKAHRIEDAINVLESMVGNGCRPNETTYTVLIEGIGFAGYRAEAMELANDLV 570
Score = 150 bits (379), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 98/355 (27%), Positives = 173/355 (48%), Gaps = 17/355 (4%)
Query: 131 SLSLGPTQKTFAIIAERYVSAGKADRAVKIFLSMHEHG-------CRQSLNSFNTILDLL 183
S SLG I R +G ++ + +M G C + + F T+
Sbjct: 82 SQSLGFRDTQMLKIFHRSCRSGNYIESLHLLETMVRKGYNPDVILCTKLIKGFFTL---- 137
Query: 184 CKEKKVEKAYNLFKVFRGKFKADVISYNVIANGWCLVKRTNKALEVLKEMVDRGLNPNLT 243
+ + KA + ++ + DV +YN + NG+C + R + A VL M + +P+
Sbjct: 138 ---RNIPKAVRVMEILEKFGQPDVFAYNALINGFCKMNRIDDATRVLDRMRSKDFSPDTV 194
Query: 244 TYNIVLKGYFRAGQIEEAWRFFLEMKKRKCEIDVVTYTTIVHGFGVVGEIKRARNVFDGM 303
TYNI++ G+++ A + ++ C+ V+TYT ++ + G + A + D M
Sbjct: 195 TYNIMIGSLCSRGKLDLALKVLNQLLSDNCQPTVITYTILIEATMLEGGVDEALKLMDEM 254
Query: 304 VNGGVLPSVATYNAMIQVLCKKDSVENAILVFEEMVGKGYMPNSTTYNVVIRGLCHTGEM 363
++ G+ P + TYN +I+ +CK+ V+ A + + KG P+ +YN+++R L + G+
Sbjct: 255 LSRGLKPDMFTYNTIIRGMCKEGMVDRAFEMVRNLELKGCEPDVISYNILLRALLNQGKW 314
Query: 364 ERALEFVGRMKDDECEPNVQTYNILIRYFCDAGEIERGLELFEKMGSGVCLPNLDTYNIL 423
E + + +M ++C+PNV TY+ILI C G+IE + L + M P+ +Y+ L
Sbjct: 315 EEGEKLMTKMFSEKCDPNVVTYSILITTLCRDGKIEEAMNLLKLMKEKGLTPDAYSYDPL 374
Query: 424 ISSMFVRKKSDDLLVAGKLLIEMVDRGFMPRKFTFNRVLNGLLLIGNQGLAKEIL 478
I++ F R+ D VA + L M+ G +P +N VL L G A EI
Sbjct: 375 IAA-FCREGRLD--VAIEFLETMISDGCLPDIVNYNTVLATLCKNGKADQALEIF 426
>sp|Q9ZQF1|PP152_ARATH Pentatricopeptide repeat-containing protein At2g15630,
mitochondrial OS=Arabidopsis thaliana GN=At2g15630 PE=3
SV=1
Length = 627
Score = 168 bits (425), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 108/360 (30%), Positives = 171/360 (47%), Gaps = 5/360 (1%)
Query: 129 MKSLSLGPTQKTFAIIAERYVSAGKADRAVKIFLSMHEHGCRQSLNSFNTILDLLCKEKK 188
M+ + PT T+ + + + G+ + A I M G + + ++N IL +C E +
Sbjct: 251 MEVFGIKPTIVTYNTLVQGFSLRGRIEGARLIISEMKSKGFQPDMQTYNPILSWMCNEGR 310
Query: 189 VEKAYNLFKVFRGKFKADVISYNVIANGWCLVKRTNKALEVLKEMVDRGLNPNLTTYNIV 248
+ K D +SYN++ G A EMV +G+ P TYN +
Sbjct: 311 ASEVLREMKEI--GLVPDSVSYNILIRGCSNNGDLEMAFAYRDEMVKQGMVPTFYTYNTL 368
Query: 249 LKGYFRAGQIEEAWRFFLEMKKRKCEIDVVTYTTIVHGFGVVGEIKRARNVFDGMVNGGV 308
+ G F +IE A E++++ +D VTY +++G+ G+ K+A + D M+ G+
Sbjct: 369 IHGLFMENKIEAAEILIREIREKGIVLDSVTYNILINGYCQHGDAKKAFALHDEMMTDGI 428
Query: 309 LPSVATYNAMIQVLCKKDSVENAILVFEEMVGKGYMPNSTTYNVVIRGLCHTGEMERALE 368
P+ TY ++I VLC+K+ A +FE++VGKG P+ N ++ G C G M+RA
Sbjct: 429 QPTQFTYTSLIYVLCRKNKTREADELFEKVVGKGMKPDLVMMNTLMDGHCAIGNMDRAFS 488
Query: 369 FVGRMKDDECEPNVQTYNILIRYFCDAGEIERGLELFEKMGSGVCLPNLDTYNILISSMF 428
+ M P+ TYN L+R C G+ E EL +M P+ +YN LIS
Sbjct: 489 LLKEMDMMSINPDDVTYNCLMRGLCGEGKFEEARELMGEMKRRGIKPDHISYNTLISGY- 547
Query: 429 VRKKSDDLLVAGKLLIEMVDRGFMPRKFTFNRVLNGLLLIGNQGLAKEILRLQSRCGRLP 488
K D A + EM+ GF P T+N +L GL LA+E+LR G +P
Sbjct: 548 --SKKGDTKHAFMVRDEMLSLGFNPTLLTYNALLKGLSKNQEGELAEELLREMKSEGIVP 605
Score = 132 bits (331), Expect = 8e-30, Method: Compositional matrix adjust.
Identities = 93/326 (28%), Positives = 159/326 (48%), Gaps = 7/326 (2%)
Query: 155 DRAVKIFLSMHEHGCRQSLNSFNTILDLLCKEKKVEKAYNLF-KVFRGKFKADVISYNVI 213
D A++ F M E G + N IL LL + ++E A+ + ++R + K++V ++N++
Sbjct: 172 DEAIECFYLMKEKGFYPKTETCNHILTLLSRLNRIENAWVFYADMYRMEIKSNVYTFNIM 231
Query: 214 ANGWCLVKRTNKALEVLKEMVDRGLNPNLTTYNIVLKGYFRAGQIEEAWRFFLEMKKRKC 273
N C + KA L M G+ P + TYN +++G+ G+IE A EMK +
Sbjct: 232 INVLCKEGKLKKAKGFLGIMEVFGIKPTIVTYNTLVQGFSLRGRIEGARLIISEMKSKGF 291
Query: 274 EIDVVTYTTIVHGFGVVGEIKRARNVFDGMVNGGVLPSVATYNAMIQVLCKKDSVENAIL 333
+ D+ TY I+ G RA V M G++P +YN +I+ +E A
Sbjct: 292 QPDMQTYNPILSWMCNEG---RASEVLREMKEIGLVPDSVSYNILIRGCSNNGDLEMAFA 348
Query: 334 VFEEMVGKGYMPNSTTYNVVIRGLCHTGEMERALEFVGRMKDDECEPNVQTYNILIRYFC 393
+EMV +G +P TYN +I GL ++E A + +++ + TYNILI +C
Sbjct: 349 YRDEMVKQGMVPTFYTYNTLIHGLFMENKIEAAEILIREIREKGIVLDSVTYNILINGYC 408
Query: 394 DAGEIERGLELFEKMGSGVCLPNLDTYNILISSMFVRKKSDDLLVAGKLLIEMVDRGFMP 453
G+ ++ L ++M + P TY LI + + K+ + A +L ++V +G P
Sbjct: 409 QHGDAKKAFALHDEMMTDGIQPTQFTYTSLIYVLCRKNKTRE---ADELFEKVVGKGMKP 465
Query: 454 RKFTFNRVLNGLLLIGNQGLAKEILR 479
N +++G IGN A +L+
Sbjct: 466 DLVMMNTLMDGHCAIGNMDRAFSLLK 491
Score = 127 bits (318), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 82/289 (28%), Positives = 146/289 (50%), Gaps = 14/289 (4%)
Query: 207 VISYNVIANGWCLVKRTNKALEVLKEMVDRGLNPNLTTYNIVLKGYFRAGQIEEAWRFFL 266
I ++++ C ++ ++A+E M ++G P T N +L R +IE AW F+
Sbjct: 155 TILFDLLVRCCCQLRMVDEAIECFYLMKEKGFYPKTETCNHILTLLSRLNRIENAWVFYA 214
Query: 267 EMKKRKCEIDVVTYTTIVHGFGVVGEIKRARNVFDGMVNGGVLPSVATYNAMIQVLCKKD 326
+M + + + +V T+ +++ G++K+A+ M G+ P++ TYN ++Q +
Sbjct: 215 DMYRMEIKSNVYTFNIMINVLCKEGKLKKAKGFLGIMEVFGIKPTIVTYNTLVQGFSLRG 274
Query: 327 SVENAILVFEEMVGKGYMPNSTTYNVVIRGLCHTGEMERALEFVGRMKDDECEPNVQTYN 386
+E A L+ EM KG+ P+ TYN ++ +C+ G RA E + MK+ P+ +YN
Sbjct: 275 RIEGARLIISEMKSKGFQPDMQTYNPILSWMCNEG---RASEVLREMKEIGLVPDSVSYN 331
Query: 387 ILIRYFCDAGEIERGLELFEKMGSGVCLPNLDTYNILISSMFVRKKSDDLLVAGKLLI-E 445
ILIR + G++E ++M +P TYN LI +F+ K + A ++LI E
Sbjct: 332 ILIRGCSNNGDLEMAFAYRDEMVKQGMVPTFYTYNTLIHGLFMENK----IEAAEILIRE 387
Query: 446 MVDRGFMPRKFTFNRVLNGLLLIGNQGLAKEILRLQSRC---GRLPRQF 491
+ ++G + T+N ++NG G AK+ L G P QF
Sbjct: 388 IREKGIVLDSVTYNILINGYC---QHGDAKKAFALHDEMMTDGIQPTQF 433
Score = 122 bits (306), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 67/221 (30%), Positives = 120/221 (54%), Gaps = 1/221 (0%)
Query: 140 TFAIIAERYVSAGKADRAVKIFLSMHEHGCRQSLNSFNTILDLLCKEKKVEKAYNLFKVF 199
T+ I+ Y G A +A + M G + + ++ +++ +LC++ K +A LF+
Sbjct: 399 TYNILINGYCQHGDAKKAFALHDEMMTDGIQPTQFTYTSLIYVLCRKNKTREADELFEKV 458
Query: 200 RGK-FKADVISYNVIANGWCLVKRTNKALEVLKEMVDRGLNPNLTTYNIVLKGYFRAGQI 258
GK K D++ N + +G C + ++A +LKEM +NP+ TYN +++G G+
Sbjct: 459 VGKGMKPDLVMMNTLMDGHCAIGNMDRAFSLLKEMDMMSINPDDVTYNCLMRGLCGEGKF 518
Query: 259 EEAWRFFLEMKKRKCEIDVVTYTTIVHGFGVVGEIKRARNVFDGMVNGGVLPSVATYNAM 318
EEA EMK+R + D ++Y T++ G+ G+ K A V D M++ G P++ TYNA+
Sbjct: 519 EEARELMGEMKRRGIKPDHISYNTLISGYSKKGDTKHAFMVRDEMLSLGFNPTLLTYNAL 578
Query: 319 IQVLCKKDSVENAILVFEEMVGKGYMPNSTTYNVVIRGLCH 359
++ L K E A + EM +G +PN +++ VI + +
Sbjct: 579 LKGLSKNQEGELAEELLREMKSEGIVPNDSSFCSVIEAMSN 619
Score = 114 bits (286), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 83/313 (26%), Positives = 142/313 (45%), Gaps = 3/313 (0%)
Query: 125 LVHRMKSLSLGPTQKTFAIIAERYVSAGKADRAVKIFLSMHEHGCRQSLNSFNTILDLLC 184
++ MK + L P ++ I+ + G + A M + G + ++NT++ L
Sbjct: 314 VLREMKEIGLVPDSVSYNILIRGCSNNGDLEMAFAYRDEMVKQGMVPTFYTYNTLIHGLF 373
Query: 185 KEKKVEKAYNLFKVFRGK-FKADVISYNVIANGWCLVKRTNKALEVLKEMVDRGLNPNLT 243
E K+E A L + R K D ++YN++ NG+C KA + EM+ G+ P
Sbjct: 374 MENKIEAAEILIREIREKGIVLDSVTYNILINGYCQHGDAKKAFALHDEMMTDGIQPTQF 433
Query: 244 TYNIVLKGYFRAGQIEEAWRFFLEMKKRKCEIDVVTYTTIVHGFGVVGEIKRARNVFDGM 303
TY ++ R + EA F ++ + + D+V T++ G +G + RA ++ M
Sbjct: 434 TYTSLIYVLCRKNKTREADELFEKVVGKGMKPDLVMMNTLMDGHCAIGNMDRAFSLLKEM 493
Query: 304 VNGGVLPSVATYNAMIQVLCKKDSVENAILVFEEMVGKGYMPNSTTYNVVIRGLCHTGEM 363
+ P TYN +++ LC + E A + EM +G P+ +YN +I G G+
Sbjct: 494 DMMSINPDDVTYNCLMRGLCGEGKFEEARELMGEMKRRGIKPDHISYNTLISGYSKKGDT 553
Query: 364 ERALEFVGRMKDDECEPNVQTYNILIRYFCDAGEIERGLELFEKMGSGVCLPNLDTYNIL 423
+ A M P + TYN L++ E E EL +M S +PN ++ +
Sbjct: 554 KHAFMVRDEMLSLGFNPTLLTYNALLKGLSKNQEGELAEELLREMKSEGIVPNDSSFCSV 613
Query: 424 ISSM--FVRKKSD 434
I +M KKSD
Sbjct: 614 IEAMSNLDAKKSD 626
>sp|Q9LSL9|PP445_ARATH Pentatricopeptide repeat-containing protein At5g65560
OS=Arabidopsis thaliana GN=At5g65560 PE=2 SV=1
Length = 915
Score = 167 bits (424), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 110/408 (26%), Positives = 196/408 (48%), Gaps = 27/408 (6%)
Query: 106 FDHAIDLAARLRD---YRTVWT-------------------LVHRMKSLSLGPTQKTFAI 143
D A+DL +++D + TV T LV M+ + P T+ +
Sbjct: 304 IDEAMDLFVKMKDDECFPTVRTYTVLIKSLCGSERKSEALNLVKEMEETGIKPNIHTYTV 363
Query: 144 IAERYVSAGKADRAVKIFLSMHEHGCRQSLNSFNTILDLLCKEKKVEKAYNLFKVFRG-K 202
+ + S K ++A ++ M E G ++ ++N +++ CK +E A ++ ++ K
Sbjct: 364 LIDSLCSQCKFEKARELLGQMLEKGLMPNVITYNALINGYCKRGMIEDAVDVVELMESRK 423
Query: 203 FKADVISYNVIANGWCLVKRTNKALEVLKEMVDRGLNPNLTTYNIVLKGYFRAGQIEEAW 262
+ +YN + G+C +KA+ VL +M++R + P++ TYN ++ G R+G + A+
Sbjct: 424 LSPNTRTYNELIKGYC-KSNVHKAMGVLNKMLERKVLPDVVTYNSLIDGQCRSGNFDSAY 482
Query: 263 RFFLEMKKRKCEIDVVTYTTIVHGFGVVGEIKRARNVFDGMVNGGVLPSVATYNAMIQVL 322
R M R D TYT+++ ++ A ++FD + GV P+V Y A+I
Sbjct: 483 RLLSLMNDRGLVPDQWTYTSMIDSLCKSKRVEEACDLFDSLEQKGVNPNVVMYTALIDGY 542
Query: 323 CKKDSVENAILVFEEMVGKGYMPNSTTYNVVIRGLCHTGEMERALEFVGRMKDDECEPNV 382
CK V+ A L+ E+M+ K +PNS T+N +I GLC G+++ A +M +P V
Sbjct: 543 CKAGKVDEAHLMLEKMLSKNCLPNSLTFNALIHGLCADGKLKEATLLEEKMVKIGLQPTV 602
Query: 383 QTYNILIRYFCDAGEIERGLELFEKMGSGVCLPNLDTYNILISSMFVRKKSDDLLVAGKL 442
T ILI G+ + F++M S P+ TY I + + R+ LL A +
Sbjct: 603 STDTILIHRLLKDGDFDHAYSRFQQMLSSGTKPDAHTYTTFIQT-YCREGR--LLDAEDM 659
Query: 443 LIEMVDRGFMPRKFTFNRVLNGLLLIGNQGLAKEILRLQSRCGRLPRQ 490
+ +M + G P FT++ ++ G +G A ++L+ G P Q
Sbjct: 660 MAKMRENGVSPDLFTYSSLIKGYGDLGQTNFAFDVLKRMRDTGCEPSQ 707
Score = 166 bits (420), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 125/455 (27%), Positives = 219/455 (48%), Gaps = 35/455 (7%)
Query: 53 PRTLTQTLHCPSLHWTPQLVDQI-------IKRLWNHALK---ALHFFNILSYHPTYAHS 102
P L L P+ H +P L + + L++ L AL+F + +S +P Y HS
Sbjct: 63 PHRLLSILSKPNWHKSPSLKSMVSAISPSHVSSLFSLDLDPKTALNFSHWISQNPRYKHS 122
Query: 103 PSSFDHAIDLAARLRDYRTVWTLVHRMKSLSLGPTQKTFAIIAERYVSAGKADRAVKIFL 162
S Y ++ TL+ + + +G K ++ + S G A + +
Sbjct: 123 VYS-------------YASLLTLL--INNGYVGVVFKIRLLMIKSCDSVGDALYVLDLCR 167
Query: 163 SMH-----EHGCRQSLNSFNTILDLLCKEKKVEKAYNLF-KVFRGKFKADVISYNVIANG 216
M+ E + + +NT+L+ L + V++ ++ ++ K ++ +YN + NG
Sbjct: 168 KMNKDERFELKYKLIIGCYNTLLNSLARFGLVDEMKQVYMEMLEDKVCPNIYTYNKMVNG 227
Query: 217 WCLVKRTNKALEVLKEMVDRGLNPNLTTYNIVLKGYFRAGQIEEAWRFFLEMKKRKCEID 276
+C + +A + + ++V+ GL+P+ TY ++ GY + ++ A++ F EM + C +
Sbjct: 228 YCKLGNVEEANQYVSKIVEAGLDPDFFTYTSLIMGYCQRKDLDSAFKVFNEMPLKGCRRN 287
Query: 277 VVTYTTIVHGFGVVGEIKRARNVFDGMVNGGVLPSVATYNAMIQVLCKKDSVENAILVFE 336
V YT ++HG V I A ++F M + P+V TY +I+ LC + A+ + +
Sbjct: 288 EVAYTHLIHGLCVARRIDEAMDLFVKMKDDECFPTVRTYTVLIKSLCGSERKSEALNLVK 347
Query: 337 EMVGKGYMPNSTTYNVVIRGLCHTGEMERALEFVGRMKDDECEPNVQTYNILIRYFCDAG 396
EM G PN TY V+I LC + E+A E +G+M + PNV TYN LI +C G
Sbjct: 348 EMEETGIKPNIHTYTVLIDSLCSQCKFEKARELLGQMLEKGLMPNVITYNALINGYCKRG 407
Query: 397 EIERGLELFEKMGSGVCLPNLDTYNILISSMFVRKKSDDLLVAGKLLIEMVDRGFMPRKF 456
IE +++ E M S PN TYN LI ++ A +L +M++R +P
Sbjct: 408 MIEDAVDVVELMESRKLSPNTRTYNELIKGYC----KSNVHKAMGVLNKMLERKVLPDVV 463
Query: 457 TFNRVLNGLLLIGNQGLAKEILRLQSRCGRLPRQF 491
T+N +++G GN A +L L + G +P Q+
Sbjct: 464 TYNSLIDGQCRSGNFDSAYRLLSLMNDRGLVPDQW 498
Score = 145 bits (366), Expect = 7e-34, Method: Compositional matrix adjust.
Identities = 89/375 (23%), Positives = 184/375 (49%), Gaps = 17/375 (4%)
Query: 125 LVHRMKSLSLGPTQKTFAIIAERYVSAGKADRAVKIFLSMHEHGCRQSLNSFNTILDLLC 184
+V M+S L P +T+ + + Y + +A+ + M E + ++N+++D C
Sbjct: 415 VVELMESRKLSPNTRTYNELIKGYCKSN-VHKAMGVLNKMLERKVLPDVVTYNSLIDGQC 473
Query: 185 KEKKVEKAYNLFKVFRGK-FKADVISYNVIANGWCLVKRTNKALEVLKEMVDRGLNPNLT 243
+ + AY L + + D +Y + + C KR +A ++ + +G+NPN+
Sbjct: 474 RSGNFDSAYRLLSLMNDRGLVPDQWTYTSMIDSLCKSKRVEEACDLFDSLEQKGVNPNVV 533
Query: 244 TYNIVLKGYFRAGQIEEAWRFFLEMKKRKCEIDVVTYTTIVHGFGVVGEIKRARNVFDGM 303
Y ++ GY +AG+++EA +M + C + +T+ ++HG G++K A + + M
Sbjct: 534 MYTALIDGYCKAGKVDEAHLMLEKMLSKNCLPNSLTFNALIHGLCADGKLKEATLLEEKM 593
Query: 304 VNGGVLPSVATYNAMIQVLCKKDSVENAILVFEEMVGKGYMPNSTTYNVVIRGLCHTGEM 363
V G+ P+V+T +I L K ++A F++M+ G P++ TY I+ C G +
Sbjct: 594 VKIGLQPTVSTDTILIHRLLKDGDFDHAYSRFQQMLSSGTKPDAHTYTTFIQTYCREGRL 653
Query: 364 ERALEFVGRMKDDECEPNVQTYNILIRYFCDAGEIERGLELFEKMGSGVCLPNLDTYNIL 423
A + + +M+++ P++ TY+ LI+ + D G+ ++ ++M C P+ T+ L
Sbjct: 654 LDAEDMMAKMRENGVSPDLFTYSSLIKGYGDLGQTNFAFDVLKRMRDTGCEPSQHTFLSL 713
Query: 424 ISSMFV-----RKKSDDLLVAG----------KLLIEMVDRGFMPRKFTFNRVLNGLLLI 468
I + +K S+ L A +LL +MV+ P ++ +++ G+ +
Sbjct: 714 IKHLLEMKYGKQKGSEPELCAMSNMMEFDTVVELLEKMVEHSVTPNAKSYEKLILGICEV 773
Query: 469 GNQGLAKEILRLQSR 483
GN +A+++ R
Sbjct: 774 GNLRVAEKVFDHMQR 788
Score = 110 bits (275), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 85/402 (21%), Positives = 180/402 (44%), Gaps = 25/402 (6%)
Query: 105 SFDHAIDLAARLRDYRTVWTLVHRMKSLSLGPTQKTFAIIAERYVSAGKADRAVKIFLSM 164
+++ ID R ++ + + L+ M L P Q T+ + + + + + A +F S+
Sbjct: 464 TYNSLIDGQCRSGNFDSAYRLLSLMNDRGLVPDQWTYTSMIDSLCKSKRVEEACDLFDSL 523
Query: 165 HEHGCRQSLNSFNTILDLLCKEKKVEKAYNLF-KVFRGKFKADVISYNVIANGWCLVKRT 223
+ G ++ + ++D CK KV++A+ + K+ + +++N + +G C +
Sbjct: 524 EQKGVNPNVVMYTALIDGYCKAGKVDEAHLMLEKMLSKNCLPNSLTFNALIHGLCADGKL 583
Query: 224 NKALEVLKEMVDRGLNPNLTTYNIVLKGYFRAGQIEEAWRFFLEMKKRKCEIDVVTYTTI 283
+A + ++MV GL P ++T I++ + G + A+ F +M + D TYTT
Sbjct: 584 KEATLLEEKMVKIGLQPTVSTDTILIHRLLKDGDFDHAYSRFQQMLSSGTKPDAHTYTTF 643
Query: 284 VHGFGVVGEIKRARNVFDGMVNGGVLPSVATYNAMIQVLCKKDSVENAILVFEEMVGKGY 343
+ + G + A ++ M GV P + TY+++I+ A V + M G
Sbjct: 644 IQTYCREGRLLDAEDMMAKMRENGVSPDLFTYSSLIKGYGDLGQTNFAFDVLKRMRDTGC 703
Query: 344 MPNSTTYNVVIR------------------GLCHTGEMERALEFVGRMKDDECEPNVQTY 385
P+ T+ +I+ + + E + +E + +M + PN ++Y
Sbjct: 704 EPSQHTFLSLIKHLLEMKYGKQKGSEPELCAMSNMMEFDTVVELLEKMVEHSVTPNAKSY 763
Query: 386 NILIRYFCDAGEIERGLELFEKM--GSGVCLPNLDTYNILISSMFVRKKSDDLLVAGKLL 443
LI C+ G + ++F+ M G+ P+ +N L+S KK ++ A K++
Sbjct: 764 EKLILGICEVGNLRVAEKVFDHMQRNEGIS-PSELVFNALLSCCCKLKKHNE---AAKVV 819
Query: 444 IEMVDRGFMPRKFTFNRVLNGLLLIGNQGLAKEILRLQSRCG 485
+M+ G +P+ + ++ GL G + + + +CG
Sbjct: 820 DDMICVGHLPQLESCKVLICGLYKKGEKERGTSVFQNLLQCG 861
Score = 98.6 bits (244), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 82/320 (25%), Positives = 139/320 (43%), Gaps = 20/320 (6%)
Query: 125 LVHRMKSLSLGPTQKTFAIIAERYVSAGKADRAVKIFLSMHEHGCRQSLNSFNTILDLLC 184
L +M + L PT T I+ R + G D A F M G + +++ T + C
Sbjct: 589 LEEKMVKIGLQPTVSTDTILIHRLLKDGDFDHAYSRFQQMLSSGTKPDAHTYTTFIQTYC 648
Query: 185 KEKKVEKAYNLFKVFR-GKFKADVISYNVIANGWCLVKRTNKALEVLKEMVDRGLNPNLT 243
+E ++ A ++ R D+ +Y+ + G+ + +TN A +VLK M D G P+
Sbjct: 649 REGRLLDAEDMMAKMRENGVSPDLFTYSSLIKGYGDLGQTNFAFDVLKRMRDTGCEPSQH 708
Query: 244 TYNIVLK-------GYFRAGQIE-------EAWRFFLEMKKRKCEIDVV----TYTTIVH 285
T+ ++K G + + E + +E+ ++ E V +Y ++
Sbjct: 709 TFLSLIKHLLEMKYGKQKGSEPELCAMSNMMEFDTVVELLEKMVEHSVTPNAKSYEKLIL 768
Query: 286 GFGVVGEIKRARNVFDGMV-NGGVLPSVATYNAMIQVLCKKDSVENAILVFEEMVGKGYM 344
G VG ++ A VFD M N G+ PS +NA++ CK A V ++M+ G++
Sbjct: 769 GICEVGNLRVAEKVFDHMQRNEGISPSELVFNALLSCCCKLKKHNEAAKVVDDMICVGHL 828
Query: 345 PNSTTYNVVIRGLCHTGEMERALEFVGRMKDDECEPNVQTYNILIRYFCDAGEIERGLEL 404
P + V+I GL GE ER + + + I+I G +E EL
Sbjct: 829 PQLESCKVLICGLYKKGEKERGTSVFQNLLQCGYYEDELAWKIIIDGVGKQGLVEAFYEL 888
Query: 405 FEKMGSGVCLPNLDTYNILI 424
F M C + TY++LI
Sbjct: 889 FNVMEKNGCKFSSQTYSLLI 908
Score = 52.8 bits (125), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 44/219 (20%), Positives = 97/219 (44%), Gaps = 22/219 (10%)
Query: 123 WTLVHRMKSLSLGPTQKTFAIIAERYVSA--GKA----------------DRAVKIFLSM 164
+ ++ RM+ P+Q TF + + + GK D V++ M
Sbjct: 692 FDVLKRMRDTGCEPSQHTFLSLIKHLLEMKYGKQKGSEPELCAMSNMMEFDTVVELLEKM 751
Query: 165 HEHGCRQSLNSFNTILDLLCKE---KKVEKAYNLFKVFRGKFKADVISYNVIANGWCLVK 221
EH + S+ ++ +C+ + EK ++ + G ++++ +N + + C +K
Sbjct: 752 VEHSVTPNAKSYEKLILGICEVGNLRVAEKVFDHMQRNEGISPSELV-FNALLSCCCKLK 810
Query: 222 RTNKALEVLKEMVDRGLNPNLTTYNIVLKGYFRAGQIEEAWRFFLEMKKRKCEIDVVTYT 281
+ N+A +V+ +M+ G P L + +++ G ++ G+ E F + + D + +
Sbjct: 811 KHNEAAKVVDDMICVGHLPQLESCKVLICGLYKKGEKERGTSVFQNLLQCGYYEDELAWK 870
Query: 282 TIVHGFGVVGEIKRARNVFDGMVNGGVLPSVATYNAMIQ 320
I+ G G G ++ +F+ M G S TY+ +I+
Sbjct: 871 IIIDGVGKQGLVEAFYELFNVMEKNGCKFSSQTYSLLIE 909
Score = 45.4 bits (106), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 39/176 (22%), Positives = 73/176 (41%), Gaps = 4/176 (2%)
Query: 114 ARLRDYRTVWTLVHRMKSLSLGPTQKTFAIIAERYVSAGKADRAVKIFLSMHEH-GCRQS 172
+ + ++ TV L+ +M S+ P K++ + G A K+F M + G S
Sbjct: 736 SNMMEFDTVVELLEKMVEHSVTPNAKSYEKLILGICEVGNLRVAEKVFDHMQRNEGISPS 795
Query: 173 LNSFNTILDLLCKEKKVEKAYNLFK--VFRGKFKADVISYNVIANGWCLVKRTNKALEVL 230
FN +L CK KK +A + + G + S V+ G + V
Sbjct: 796 ELVFNALLSCCCKLKKHNEAAKVVDDMICVGHL-PQLESCKVLICGLYKKGEKERGTSVF 854
Query: 231 KEMVDRGLNPNLTTYNIVLKGYFRAGQIEEAWRFFLEMKKRKCEIDVVTYTTIVHG 286
+ ++ G + + I++ G + G +E + F M+K C+ TY+ ++ G
Sbjct: 855 QNLLQCGYYEDELAWKIIIDGVGKQGLVEAFYELFNVMEKNGCKFSSQTYSLLIEG 910
>sp|Q0WVK7|PPR12_ARATH Pentatricopeptide repeat-containing protein At1g05670,
mitochondrial OS=Arabidopsis thaliana GN=At1g05670 PE=2
SV=1
Length = 741
Score = 167 bits (423), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 102/382 (26%), Positives = 177/382 (46%), Gaps = 4/382 (1%)
Query: 84 LKALHFFNILSYHPTYAHSPSSFDHAIDLAARLRDYRTVWTLVHRMKSLSLGPTQKTFAI 143
+K H +L Y S+ ++ R + VW L+ MK L P +
Sbjct: 262 IKEAHHLLLLMELKGYTPDVISYSTVVNGYCRFGELDKVWKLIEVMKRKGLKPNSYIYGS 321
Query: 144 IAERYVSAGKADRAVKIFLSMHEHGCRQSLNSFNTILDLLCKEKKVEKAYNLFKVFRGK- 202
I K A + F M G + T++D CK + A F +
Sbjct: 322 IIGLLCRICKLAEAEEAFSEMIRQGILPDTVVYTTLIDGFCKRGDIRAASKFFYEMHSRD 381
Query: 203 FKADVISYNVIANGWCLVKRTNKALEVLKEMVDRGLNPNLTTYNIVLKGYFRAGQIEEAW 262
DV++Y I +G+C + +A ++ EM +GL P+ T+ ++ GY +AG +++A+
Sbjct: 382 ITPDVLTYTAIISGFCQIGDMVEAGKLFHEMFCKGLEPDSVTFTELINGYCKAGHMKDAF 441
Query: 263 RFFLEMKKRKCEIDVVTYTTIVHGFGVVGEIKRARNVFDGMVNGGVLPSVATYNAMIQVL 322
R M + C +VVTYTT++ G G++ A + M G+ P++ TYN+++ L
Sbjct: 442 RVHNHMIQAGCSPNVVTYTTLIDGLCKEGDLDSANELLHEMWKIGLQPNIFTYNSIVNGL 501
Query: 323 CKKDSVENAILVFEEMVGKGYMPNSTTYNVVIRGLCHTGEMERALEFVGRMKDDECEPNV 382
CK ++E A+ + E G ++ TY ++ C +GEM++A E + M +P +
Sbjct: 502 CKSGNIEEAVKLVGEFEAAGLNADTVTYTTLMDAYCKSGEMDKAQEILKEMLGKGLQPTI 561
Query: 383 QTYNILIRYFCDAGEIERGLELFEKMGSGVCLPNLDTYNILISSMFVRKKSDDLLVAGKL 442
T+N+L+ FC G +E G +L M + PN T+N L+ +R ++L A +
Sbjct: 562 VTFNVLMNGFCLHGMLEDGEKLLNWMLAKGIAPNATTFNSLVKQYCIR---NNLKAATAI 618
Query: 443 LIEMVDRGFMPRKFTFNRVLNG 464
+M RG P T+ ++ G
Sbjct: 619 YKDMCSRGVGPDGKTYENLVKG 640
Score = 164 bits (415), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 102/384 (26%), Positives = 186/384 (48%), Gaps = 6/384 (1%)
Query: 104 SSFDHAIDLAARLRDYRTVWTLVHRMKSLSLGPTQKTFAIIAERYVSAGKADRAVKIFLS 163
+S++ I +L + L+ M+ P +++ + Y G+ D+ K+
Sbjct: 247 ASYNIVIHFVCQLGRIKEAHHLLLLMELKGYTPDVISYSTVVNGYCRFGELDKVWKLIEV 306
Query: 164 MHEHGCRQSLNSFNTILDLLCKEKKVEKAYNLF-KVFRGKFKADVISYNVIANGWCLVKR 222
M G + + + +I+ LLC+ K+ +A F ++ R D + Y + +G+C
Sbjct: 307 MKRKGLKPNSYIYGSIIGLLCRICKLAEAEEAFSEMIRQGILPDTVVYTTLIDGFCKRGD 366
Query: 223 TNKALEVLKEMVDRGLNPNLTTYNIVLKGYFRAGQIEEAWRFFLEMKKRKCEIDVVTYTT 282
A + EM R + P++ TY ++ G+ + G + EA + F EM + E D VT+T
Sbjct: 367 IRAASKFFYEMHSRDITPDVLTYTAIISGFCQIGDMVEAGKLFHEMFCKGLEPDSVTFTE 426
Query: 283 IVHGFGVVGEIKRARNVFDGMVNGGVLPSVATYNAMIQVLCKKDSVENAILVFEEMVGKG 342
+++G+ G +K A V + M+ G P+V TY +I LCK+ +++A + EM G
Sbjct: 427 LINGYCKAGHMKDAFRVHNHMIQAGCSPNVVTYTTLIDGLCKEGDLDSANELLHEMWKIG 486
Query: 343 YMPNSTTYNVVIRGLCHTGEMERALEFVGRMKDDECEPNVQTYNILIRYFCDAGEIERGL 402
PN TYN ++ GLC +G +E A++ VG + + TY L+ +C +GE+++
Sbjct: 487 LQPNIFTYNSIVNGLCKSGNIEEAVKLVGEFEAAGLNADTVTYTTLMDAYCKSGEMDKAQ 546
Query: 403 ELFEKMGSGVCLPNLDTYNILISSMFVRKKSDDLLVAGKLLIEMVDRGFMPRKFTFNRVL 462
E+ ++M P + T+N+L++ + +D KLL M+ +G P TFN ++
Sbjct: 547 EILKEMLGKGLQPTIVTFNVLMNGFCLHGMLED---GEKLLNWMLAKGIAPNATTFNSLV 603
Query: 463 NGLLLIGNQGLAKEILRLQSRCGR 486
+ N A I + C R
Sbjct: 604 KQYCIRNNLKAATAIYK--DMCSR 625
Score = 151 bits (382), Expect = 9e-36, Method: Compositional matrix adjust.
Identities = 98/338 (28%), Positives = 158/338 (46%), Gaps = 5/338 (1%)
Query: 135 GPTQKTFAIIAERYVSAGKADRAVKIFLSMHEHGCRQSLNSFNTILDLLCKE-KKVEKAY 193
G + F + + V G A ++F M +G S++S N L L K+ K A
Sbjct: 172 GSDPRVFDVFFQVLVDFGLLREARRVFEKMLNYGLVLSVDSCNVYLTRLSKDCYKTATAI 231
Query: 194 NLFKVF-RGKFKADVISYNVIANGWCLVKRTNKALEVLKEMVDRGLNPNLTTYNIVLKGY 252
+F+ F +V SYN++ + C + R +A +L M +G P++ +Y+ V+ GY
Sbjct: 232 IVFREFPEVGVCWNVASYNIVIHFVCQLGRIKEAHHLLLLMELKGYTPDVISYSTVVNGY 291
Query: 253 FRAGQIEEAWRFFLEMKKRKCEIDVVTYTTIVHGFGVVGEIKRARNVFDGMVNGGVLPSV 312
R G++++ W+ MK++ + + Y +I+ + ++ A F M+ G+LP
Sbjct: 292 CRFGELDKVWKLIEVMKRKGLKPNSYIYGSIIGLLCRICKLAEAEEAFSEMIRQGILPDT 351
Query: 313 ATYNAMIQVLCKKDSVENAILVFEEMVGKGYMPNSTTYNVVIRGLCHTGEMERALEFVGR 372
Y +I CK+ + A F EM + P+ TY +I G C G+M A +
Sbjct: 352 VVYTTLIDGFCKRGDIRAASKFFYEMHSRDITPDVLTYTAIISGFCQIGDMVEAGKLFHE 411
Query: 373 MKDDECEPNVQTYNILIRYFCDAGEIERGLELFEKMGSGVCLPNLDTYNILISSMFVRKK 432
M EP+ T+ LI +C AG ++ + M C PN+ TY LI + K
Sbjct: 412 MFCKGLEPDSVTFTELINGYCKAGHMKDAFRVHNHMIQAGCSPNVVTYTTLIDGLC---K 468
Query: 433 SDDLLVAGKLLIEMVDRGFMPRKFTFNRVLNGLLLIGN 470
DL A +LL EM G P FT+N ++NGL GN
Sbjct: 469 EGDLDSANELLHEMWKIGLQPNIFTYNSIVNGLCKSGN 506
Score = 142 bits (358), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 93/352 (26%), Positives = 165/352 (46%), Gaps = 6/352 (1%)
Query: 110 IDLAARLRDYRTVWTLVHRMKSLSLGPTQKTFAIIAERYVSAGKADRAVKIFLSMHEHGC 169
ID + D R + M S + P T+ I + G A K+F M G
Sbjct: 358 IDGFCKRGDIRAASKFFYEMHSRDITPDVLTYTAIISGFCQIGDMVEAGKLFHEMFCKGL 417
Query: 170 RQSLNSFNTILDLLCKEKKVEKAYNLFK-VFRGKFKADVISYNVIANGWCLVKRTNKALE 228
+F +++ CK ++ A+ + + + +V++Y + +G C + A E
Sbjct: 418 EPDSVTFTELINGYCKAGHMKDAFRVHNHMIQAGCSPNVVTYTTLIDGLCKEGDLDSANE 477
Query: 229 VLKEMVDRGLNPNLTTYNIVLKGYFRAGQIEEAWRFFLEMKKRKCEIDVVTYTTIVHGFG 288
+L EM GL PN+ TYN ++ G ++G IEEA + E + D VTYTT++ +
Sbjct: 478 LLHEMWKIGLQPNIFTYNSIVNGLCKSGNIEEAVKLVGEFEAAGLNADTVTYTTLMDAYC 537
Query: 289 VVGEIKRARNVFDGMVNGGVLPSVATYNAMIQVLCKKDSVENAILVFEEMVGKGYMPNST 348
GE+ +A+ + M+ G+ P++ T+N ++ C +E+ + M+ KG PN+T
Sbjct: 538 KSGEMDKAQEILKEMLGKGLQPTIVTFNVLMNGFCLHGMLEDGEKLLNWMLAKGIAPNAT 597
Query: 349 TYNVVIRGLCHTGEMERALEFVGRMKDDECEPNVQTYNILIRYFCDAGEIERGLELFEKM 408
T+N +++ C ++ A M P+ +TY L++ C A ++ LF++M
Sbjct: 598 TFNSLVKQYCIRNNLKAATAIYKDMCSRGVGPDGKTYENLVKGHCKARNMKEAWFLFQEM 657
Query: 409 -GSGVCLPNLDTYNILISSMFVRKKSDDLLVAGKLLIEMVDRGFMPRKFTFN 459
G G + ++ TY++LI RKK L A ++ +M G K F+
Sbjct: 658 KGKGFSV-SVSTYSVLIKGFLKRKK---FLEAREVFDQMRREGLAADKEIFD 705
Score = 140 bits (353), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 76/322 (23%), Positives = 163/322 (50%), Gaps = 1/322 (0%)
Query: 125 LVHRMKSLSLGPTQKTFAIIAERYVSAGKADRAVKIFLSMHEHGCRQSLNSFNTILDLLC 184
L H M L P TF + Y AG A ++ M + GC ++ ++ T++D LC
Sbjct: 408 LFHEMFCKGLEPDSVTFTELINGYCKAGHMKDAFRVHNHMIQAGCSPNVVTYTTLIDGLC 467
Query: 185 KEKKVEKAYNLF-KVFRGKFKADVISYNVIANGWCLVKRTNKALEVLKEMVDRGLNPNLT 243
KE ++ A L ++++ + ++ +YN I NG C +A++++ E GLN +
Sbjct: 468 KEGDLDSANELLHEMWKIGLQPNIFTYNSIVNGLCKSGNIEEAVKLVGEFEAAGLNADTV 527
Query: 244 TYNIVLKGYFRAGQIEEAWRFFLEMKKRKCEIDVVTYTTIVHGFGVVGEIKRARNVFDGM 303
TY ++ Y ++G++++A EM + + +VT+ +++GF + G ++ + + M
Sbjct: 528 TYTTLMDAYCKSGEMDKAQEILKEMLGKGLQPTIVTFNVLMNGFCLHGMLEDGEKLLNWM 587
Query: 304 VNGGVLPSVATYNAMIQVLCKKDSVENAILVFEEMVGKGYMPNSTTYNVVIRGLCHTGEM 363
+ G+ P+ T+N++++ C +++++ A ++++M +G P+ TY +++G C M
Sbjct: 588 LAKGIAPNATTFNSLVKQYCIRNNLKAATAIYKDMCSRGVGPDGKTYENLVKGHCKARNM 647
Query: 364 ERALEFVGRMKDDECEPNVQTYNILIRYFCDAGEIERGLELFEKMGSGVCLPNLDTYNIL 423
+ A MK +V TY++LI+ F + E+F++M + + ++
Sbjct: 648 KEAWFLFQEMKGKGFSVSVSTYSVLIKGFLKRKKFLEAREVFDQMRREGLAADKEIFDFF 707
Query: 424 ISSMFVRKKSDDLLVAGKLLIE 445
+ + K+ D ++ +IE
Sbjct: 708 SDTKYKGKRPDTIVDPIDEIIE 729
Score = 120 bits (301), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 75/270 (27%), Positives = 136/270 (50%), Gaps = 3/270 (1%)
Query: 222 RTNKALEVLKEMVDRGLNPNLTTYNIVLKGYFRAGQIEEAWRFFLEMKKRKCEIDVVTYT 281
+T A+ V +E + G+ N+ +YNIV+ + G+I+EA L M+ + DV++Y+
Sbjct: 226 KTATAIIVFREFPEVGVCWNVASYNIVIHFVCQLGRIKEAHHLLLLMELKGYTPDVISYS 285
Query: 282 TIVHGFGVVGEIKRARNVFDGMVNGGVLPSVATYNAMIQVLCKKDSVENAILVFEEMVGK 341
T+V+G+ GE+ + + + M G+ P+ Y ++I +LC+ + A F EM+ +
Sbjct: 286 TVVNGYCRFGELDKVWKLIEVMKRKGLKPNSYIYGSIIGLLCRICKLAEAEEAFSEMIRQ 345
Query: 342 GYMPNSTTYNVVIRGLCHTGEMERALEFVGRMKDDECEPNVQTYNILIRYFCDAGEIERG 401
G +P++ Y +I G C G++ A +F M + P+V TY +I FC G++
Sbjct: 346 GILPDTVVYTTLIDGFCKRGDIRAASKFFYEMHSRDITPDVLTYTAIISGFCQIGDMVEA 405
Query: 402 LELFEKMGSGVCLPNLDTYNILISSMFVRKKSDDLLVAGKLLIEMVDRGFMPRKFTFNRV 461
+LF +M P+ T+ LI+ K+ + A ++ M+ G P T+ +
Sbjct: 406 GKLFHEMFCKGLEPDSVTFTELINGYC---KAGHMKDAFRVHNHMIQAGCSPNVVTYTTL 462
Query: 462 LNGLLLIGNQGLAKEILRLQSRCGRLPRQF 491
++GL G+ A E+L + G P F
Sbjct: 463 IDGLCKEGDLDSANELLHEMWKIGLQPNIF 492
>sp|Q9M302|PP270_ARATH Pentatricopeptide repeat-containing protein At3g48810
OS=Arabidopsis thaliana GN=At3g48810 PE=2 SV=1
Length = 659
Score = 167 bits (423), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 130/524 (24%), Positives = 218/524 (41%), Gaps = 108/524 (20%)
Query: 75 IIKRLWNHALK--ALHFFNILSYHPTYAHSPSSFDHAIDLAARLRDYRTVWTLVHRMKSL 132
++KRL + ALHFF ++ + H+P +F+ I A +V L+ +MK
Sbjct: 46 VVKRLRQESCVPLALHFFKSIANSNLFKHTPLTFEVMIRKLAMDGQVDSVQYLLQQMKLQ 105
Query: 133 SLGPTQKTFAIIAERYVSAGKADRAVKIFLSMHEHGCRQSLNSFNTILDLL--------- 183
++ F + Y G A+RAV++F + E GC S+ +N +LD L
Sbjct: 106 GFHCSEDLFISVISVYRQVGLAERAVEMFYRIKEFGCDPSVKIYNHVLDTLLGENRIQMI 165
Query: 184 --------------------------CKEKKVEKAYNLFKVFRGK--------------- 202
CK KV+ A L K
Sbjct: 166 YMVYRDMKRDGFEPNVFTYNVLLKALCKNNKVDGAKKLLVEMSNKGCCPDAVSYTTVISS 225
Query: 203 ----------------FKADVISYNVIANGWCLVKRTNKALEVLKEMVDRGLNPNLTTYN 246
F+ V YN + NG C A E+++EMV++G++PN+ +Y+
Sbjct: 226 MCEVGLVKEGRELAERFEPVVSVYNALINGLCKEHDYKGAFELMREMVEKGISPNVISYS 285
Query: 247 IVLKGYFRAGQIEEAWRFFLEMKKRKC--------------------------------- 273
++ +GQIE A+ F +M KR C
Sbjct: 286 TLINVLCNSGQIELAFSFLTQMLKRGCHPNIYTLSSLVKGCFLRGTTFDALDLWNQMIRG 345
Query: 274 ---EIDVVTYTTIVHGFGVVGEIKRARNVFDGMVNGGVLPSVATYNAMIQVLCKKDSVEN 330
+ +VV Y T+V GF G I +A +VF M G P++ TY ++I K+ S++
Sbjct: 346 FGLQPNVVAYNTLVQGFCSHGNIVKAVSVFSHMEEIGCSPNIRTYGSLINGFAKRGSLDG 405
Query: 331 AILVFEEMVGKGYMPNSTTYNVVIRGLCHTGEMERALEFVGRMKDDECEPNVQTYNILIR 390
A+ ++ +M+ G PN Y ++ LC + + A + M + C P+V T+N I+
Sbjct: 406 AVYIWNKMLTSGCCPNVVVYTNMVEALCRHSKFKEAESLIEIMSKENCAPSVPTFNAFIK 465
Query: 391 YFCDAGEIERGLELFEKMGSG-VCLPNLDTYNILISSMFVRKKSDDLLVAGKLLIEMVDR 449
CDAG ++ ++F +M C PN+ TYN L+ + K++ + A L E+ R
Sbjct: 466 GLCDAGRLDWAEKVFRQMEQQHRCPPNIVTYNELLDGL---AKANRIEEAYGLTREIFMR 522
Query: 450 GFMPRKFTFNRVLNGLLLIGNQGLAKEILRLQSRCGRLPRQFKL 493
G T+N +L+G G G+A +++ G+ P + +
Sbjct: 523 GVEWSSSTYNTLLHGSCNAGLPGIALQLVGKMMVDGKSPDEITM 566
Score = 120 bits (302), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 91/404 (22%), Positives = 181/404 (44%), Gaps = 43/404 (10%)
Query: 104 SSFDHAIDLAARLRDYRTVWTLVHRMKSLSLGPTQKTFAIIAERYVSAGKADRAVKIFLS 163
S ++ I+ + DY+ + L+ M + P +++ + ++G+ + A
Sbjct: 247 SVYNALINGLCKEHDYKGAFELMREMVEKGISPNVISYSTLINVLCNSGQIELAFSFLTQ 306
Query: 164 MHEHGCRQSLNSFNTILDLLCKEKKVEKAYNLF-KVFRG-KFKADVISYNVIANGWCLVK 221
M + GC ++ + ++++ A +L+ ++ RG + +V++YN + G+C
Sbjct: 307 MLKRGCHPNIYTLSSLVKGCFLRGTTFDALDLWNQMIRGFGLQPNVVAYNTLVQGFCSHG 366
Query: 222 RTNKALEVLKEMVDRGLNPNLTTYNIVLKGYFRAGQIEEAWRFFLEMKKRKCEIDVVTYT 281
KA+ V M + G +PN+ TY ++ G+ + G ++ A + +M C +VV YT
Sbjct: 367 NIVKAVSVFSHMEEIGCSPNIRTYGSLINGFAKRGSLDGAVYIWNKMLTSGCCPNVVVYT 426
Query: 282 TIVHGFGVVGEIKRARNVFDGMVNGGVLPSVATYNAMIQVLC------------------ 323
+V + K A ++ + M PSV T+NA I+ LC
Sbjct: 427 NMVEALCRHSKFKEAESLIEIMSKENCAPSVPTFNAFIKGLCDAGRLDWAEKVFRQMEQQ 486
Query: 324 ------------------KKDSVENAILVFEEMVGKGYMPNSTTYNVVIRGLCHTGEMER 365
K + +E A + E+ +G +S+TYN ++ G C+ G
Sbjct: 487 HRCPPNIVTYNELLDGLAKANRIEEAYGLTREIFMRGVEWSSSTYNTLLHGSCNAGLPGI 546
Query: 366 ALEFVGRMKDDECEPNVQTYNILIRYFCDAGEIERGLELFEKMGSG--VCLPNLDTYNIL 423
AL+ VG+M D P+ T N++I +C G+ ER ++ + + G P++ +Y +
Sbjct: 547 ALQLVGKMMVDGKSPDEITMNMIILAYCKQGKAERAAQMLDLVSCGRRKWRPDVISYTNV 606
Query: 424 ISSMFVRKKSDDLLVAGKLLIEMVDRGFMPRKFTFNRVLNGLLL 467
I + +D ++ LL M+ G +P T++ ++N +L
Sbjct: 607 IWGLCRSNCREDGVI---LLERMISAGIVPSIATWSVLINCFIL 647
Score = 93.2 bits (230), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 65/278 (23%), Positives = 130/278 (46%), Gaps = 23/278 (8%)
Query: 63 PSLHWTPQLVDQIIKR--------LWNHALKALHFFNILSYHPTYAHSPSSFDHAIDLAA 114
P++ L++ KR +WN L + N++ Y + ++
Sbjct: 385 PNIRTYGSLINGFAKRGSLDGAVYIWNKMLTSGCCPNVVVY-----------TNMVEALC 433
Query: 115 RLRDYRTVWTLVHRMKSLSLGPTQKTFAIIAERYVSAGKADRAVKIFLSM-HEHGCRQSL 173
R ++ +L+ M + P+ TF + AG+ D A K+F M +H C ++
Sbjct: 434 RHSKFKEAESLIEIMSKENCAPSVPTFNAFIKGLCDAGRLDWAEKVFRQMEQQHRCPPNI 493
Query: 174 NSFNTILDLLCKEKKVEKAYNLFK-VFRGKFKADVISYNVIANGWCLVKRTNKALEVLKE 232
++N +LD L K ++E+AY L + +F + +YN + +G C AL+++ +
Sbjct: 494 VTYNELLDGLAKANRIEEAYGLTREIFMRGVEWSSSTYNTLLHGSCNAGLPGIALQLVGK 553
Query: 233 MVDRGLNPNLTTYNIVLKGYFRAGQIEEAWRF--FLEMKKRKCEIDVVTYTTIVHGFGVV 290
M+ G +P+ T N+++ Y + G+ E A + + +RK DV++YT ++ G
Sbjct: 554 MMVDGKSPDEITMNMIILAYCKQGKAERAAQMLDLVSCGRRKWRPDVISYTNVIWGLCRS 613
Query: 291 GEIKRARNVFDGMVNGGVLPSVATYNAMIQVLCKKDSV 328
+ + + M++ G++PS+AT++ +I D V
Sbjct: 614 NCREDGVILLERMISAGIVPSIATWSVLINCFILDDIV 651
>sp|Q9M2C8|PP291_ARATH Pentatricopeptide repeat-containing protein At3g61360
OS=Arabidopsis thaliana GN=At3g61360 PE=2 SV=1
Length = 498
Score = 166 bits (420), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 111/403 (27%), Positives = 198/403 (49%), Gaps = 21/403 (5%)
Query: 61 HCPSLHWTPQLVDQIIKRLW---NHALKALHFFNILSYHPTYAHSPSSFDHAIDLAARLR 117
H P +P+ V +++ RL+ ++ LKAL FF + + SF+ + + AR+R
Sbjct: 58 HIPLSSLSPEFVSEVLGRLFAAHSNGLKALEFFKYSLKSSKSSPTSDSFEKTLHILARMR 117
Query: 118 DYRTVWTLVHRMKS-----LSLGPTQKTFAIIAERYVSAGKADRAVKIFLSMHEHGCRQ- 171
+ W L+ ++ LS K+ +I+ + G + ++ F+ M + R+
Sbjct: 118 YFDQAWALMAEVRKDYPNLLSF----KSMSILLCKIAKFGSYEETLEAFVKMEKEIFRKK 173
Query: 172 -SLNSFNTILDLLCKEKKVEKAYNLFKVFRGKFKADVISYNVIANGWCLVKRTNKALEVL 230
++ FN +L C E+++++A ++F+ +F DV + N++ G+
Sbjct: 174 FGVDEFNILLRAFCTEREMKEARSIFEKLHSRFNPDVKTMNILLLGFKEAGDVTATELFY 233
Query: 231 KEMVDRGLNPNLTTYNIVLKGYFRAGQIEEAWRFFLEMKKRKCEIDVVTYTTIVHGFGVV 290
EMV RG PN TY I + G+ + EA R F +M + +I V TT++HG GV
Sbjct: 234 HEMVKRGFKPNSVTYGIRIDGFCKKRNFGEALRLFEDMDRLDFDITVQILTTLIHGSGVA 293
Query: 291 GEIKRARNVFDGMVNGGVLPSVATYNAMIQVLCKKDSVENAILVFEEMVGKGYMPNSTTY 350
+AR +FD + G+ P YNA++ L K V AI V +EM KG P+S T+
Sbjct: 294 RNKIKARQLFDEISKRGLTPDCGAYNALMSSLMKCGDVSGAIKVMKEMEEKGIEPDSVTF 353
Query: 351 NVVIRGLCHTGE--MERALEFVGRMKDDECEPNVQTYNILIRYFCDAGEIERGLELFEKM 408
+ + G+ + E E+ +MK+ P T +L++ FC GE+ GL+L++ M
Sbjct: 354 HSMFIGMMKSKEFGFNGVCEYYQKMKERSLVPKTPTIVMLMKLFCHNGEVNLGLDLWKYM 413
Query: 409 -GSGVCLPNLDTYNILISSMFVRKKSDDLLVAGKLLIEMVDRG 450
G C P+ +L +++ R++++D A + + V+RG
Sbjct: 414 LEKGYC-PHGHALELLTTALCARRRAND---AFECSWQTVERG 452
Score = 50.8 bits (120), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 51/178 (28%), Positives = 79/178 (44%), Gaps = 14/178 (7%)
Query: 315 YNAMIQVLCKKDSVENAILVFEEMVGKGYMPNSTTYNVVIRGLCHT---GEMERALEFVG 371
+ + +L + + A + E V K Y PN ++ + LC G E LE
Sbjct: 106 FEKTLHILARMRYFDQAWALMAE-VRKDY-PNLLSFKSMSILLCKIAKFGSYEETLEAFV 163
Query: 372 RMKDD--ECEPNVQTYNILIRYFCDAGEIERGLELFEKMGSGVCLPNLDTYNILISSMFV 429
+M+ + + V +NIL+R FC E++ +FEK+ S P++ T NIL+
Sbjct: 164 KMEKEIFRKKFGVDEFNILLRAFCTEREMKEARSIFEKLHSRFN-PDVKTMNILLLGF-- 220
Query: 430 RKKSDDLLVAGKLLIEMVDRGFMPRKFTFNRVLNGLLLIGNQGLAKEILRLQSRCGRL 487
K++ D+ EMV RGF P T+ ++G N G E LRL RL
Sbjct: 221 -KEAGDVTATELFYHEMVKRGFKPNSVTYGIRIDGFCKKRNFG---EALRLFEDMDRL 274
>sp|Q9CAM8|PP100_ARATH Pentatricopeptide repeat-containing protein At1g63150
OS=Arabidopsis thaliana GN=At1g63150 PE=2 SV=1
Length = 629
Score = 166 bits (419), Expect = 5e-40, Method: Compositional matrix adjust.
Identities = 100/365 (27%), Positives = 176/365 (48%), Gaps = 7/365 (1%)
Query: 125 LVHRMKSLSLGPTQKTFAIIAERYVSAGKADRAVKIFLSMHEHGCRQSLNSFNTILDLLC 184
LV +M P T+ + G D A+ + M + ++ FNTI+D LC
Sbjct: 210 LVDQMVQRGCQPDLVTYGTVVNGLCKRGDIDLALNLLNKMEAARIKANVVIFNTIIDSLC 269
Query: 185 KEKKVEKAYNLFKVFRGK-FKADVISYNVIANGWCLVKRTNKALEVLKEMVDRGLNPNLT 243
K + VE A +LF K + +V++YN + N C R + A +L M+++ +NPN+
Sbjct: 270 KYRHVEVAVDLFTEMETKGIRPNVVTYNSLINCLCNYGRWSDASRLLSNMLEKKINPNVV 329
Query: 244 TYNIVLKGYFRAGQIEEAWRFFLEMKKRKCEIDVVTYTTIVHGFGVVGEIKRARNVFDGM 303
T+N ++ +F+ G++ EA + EM +R + D +TY +++GF + + A+ +F M
Sbjct: 330 TFNALIDAFFKEGKLVEAEKLHEEMIQRSIDPDTITYNLLINGFCMHNRLDEAKQMFKFM 389
Query: 304 VNGGVLPSVATYNAMIQVLCKKDSVENAILVFEEMVGKGYMPNSTTYNVVIRGLCHTGEM 363
V+ LP++ TYN +I CK VE+ + +F EM +G + N+ TY +I+G G+
Sbjct: 390 VSKDCLPNIQTYNTLINGFCKCKRVEDGVELFREMSQRGLVGNTVTYTTIIQGFFQAGDC 449
Query: 364 ERALEFVGRMKDDECEPNVQTYNILIRYFCDAGEIERGLELFEKMGSGVCLPNLDTYNIL 423
+ A +M + ++ TY+IL+ C G+++ L +F+ + N+ YN +
Sbjct: 450 DSAQMVFKQMVSNRVPTDIMTYSILLHGLCSYGKLDTALVIFKYLQKSEMELNIFIYNTM 509
Query: 424 ISSMFVRKKSDDLLVAGKLLIEMVDRGFMPRKFTFNRVLNGLLLIGNQGLAKEILRLQSR 483
I M K G+ P T+N +++GL A ++ R
Sbjct: 510 IEGMCKAGK------VGEAWDLFCSLSIKPDVVTYNTMISGLCSKRLLQEADDLFRKMKE 563
Query: 484 CGRLP 488
G LP
Sbjct: 564 DGTLP 568
Score = 155 bits (393), Expect = 6e-37, Method: Compositional matrix adjust.
Identities = 111/418 (26%), Positives = 188/418 (44%), Gaps = 53/418 (12%)
Query: 107 DHAIDLAARLRDYRTVWTLVHRMKSLSLGPTQKTFAIIAERYVSAGKADRAVKIFLSMHE 166
D A+DL + R ++V K LS F ++ +S G+ M
Sbjct: 65 DDAVDLFGDMVKSRPFPSIVEFNKLLSAVAKMNKFELV----ISLGE---------QMQT 111
Query: 167 HGCRQSLNSFNTILDLLCKEKKVEKAYN-LFKVFRGKFKADVISYNVIANGWCLVKRTNK 225
G L +++ ++ C+ ++ A L K+ + ++ D+++ + + NG+C KR +
Sbjct: 112 LGISHDLYTYSIFINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLSSLLNGYCHSKRISD 171
Query: 226 ALEVLKEMVDRGLNPNLTTYNIVLKGYFRAGQIEEAWRFFLEMKKRKCEIDVVTYTTIVH 285
A+ ++ +MV+ G P+ T+ ++ G F + EA +M +R C+ D+VTY T+V+
Sbjct: 172 AVALVDQMVEMGYKPDTFTFTTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYGTVVN 231
Query: 286 GFGVVGEIKRARNVFDGMVNGGVLPSVATYNAMIQVLCKKDSVENAILVFEEMVGKGYMP 345
G G+I A N+ + M + +V +N +I LCK VE A+ +F EM KG P
Sbjct: 232 GLCKRGDIDLALNLLNKMEAARIKANVVIFNTIIDSLCKYRHVEVAVDLFTEMETKGIRP 291
Query: 346 NSTTYNVVIRGLCHTGEMERALEFVGRMKDDECEPNVQ---------------------- 383
N TYN +I LC+ G A + M + + PNV
Sbjct: 292 NVVTYNSLINCLCNYGRWSDASRLLSNMLEKKINPNVVTFNALIDAFFKEGKLVEAEKLH 351
Query: 384 -------------TYNILIRYFCDAGEIERGLELFEKMGSGVCLPNLDTYNILISSMFVR 430
TYN+LI FC ++ ++F+ M S CLPN+ TYN LI+
Sbjct: 352 EEMIQRSIDPDTITYNLLINGFCMHNRLDEAKQMFKFMVSKDCLPNIQTYNTLINGFCKC 411
Query: 431 KKSDDLLVAGKLLIEMVDRGFMPRKFTFNRVLNGLLLIGNQGLAKEILRLQSRCGRLP 488
K+ +D +L EM RG + T+ ++ G G+ A+ + + Q R+P
Sbjct: 412 KRVED---GVELFREMSQRGLVGNTVTYTTIIQGFFQAGDCDSAQMVFK-QMVSNRVP 465
Score = 120 bits (300), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 74/283 (26%), Positives = 127/283 (44%), Gaps = 33/283 (11%)
Query: 125 LVHRMKSLSLGPTQKTFAIIAERYVSAGKADRAVKIFLSMHEHGCRQSLNSFNTILDLLC 184
L+ M + P TF + + + GK A K+ M + ++N +++ C
Sbjct: 315 LLSNMLEKKINPNVVTFNALIDAFFKEGKLVEAEKLHEEMIQRSIDPDTITYNLLINGFC 374
Query: 185 KEKKVEKAYNLFKVFRGK-FKADVISYNVIANGWCLVKRTNKALEVLKEMVDRGLNPNLT 243
++++A +FK K ++ +YN + NG+C KR +E+ +EM RGL N
Sbjct: 375 MHNRLDEAKQMFKFMVSKDCLPNIQTYNTLINGFCKCKRVEDGVELFREMSQRGLVGNTV 434
Query: 244 TYNIVLKGYFRAGQIEEAWRFFLEMKKRKCEIDVVTYTTIVHGFGVVGEIKRARNVF--- 300
TY +++G+F+AG + A F +M + D++TY+ ++HG G++ A +F
Sbjct: 435 TYTTIIQGFFQAGDCDSAQMVFKQMVSNRVPTDIMTYSILLHGLCSYGKLDTALVIFKYL 494
Query: 301 ----------------DGMVNGG-------------VLPSVATYNAMIQVLCKKDSVENA 331
+GM G + P V TYN MI LC K ++ A
Sbjct: 495 QKSEMELNIFIYNTMIEGMCKAGKVGEAWDLFCSLSIKPDVVTYNTMISGLCSKRLLQEA 554
Query: 332 ILVFEEMVGKGYMPNSTTYNVVIRGLCHTGEMERALEFVGRMK 374
+F +M G +PNS TYN +IR + + E + M+
Sbjct: 555 DDLFRKMKEDGTLPNSGTYNTLIRANLRDCDRAASAELIKEMR 597
Score = 97.1 bits (240), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 62/259 (23%), Positives = 120/259 (46%), Gaps = 3/259 (1%)
Query: 220 VKRTNKALEVLKEMVDRGLNPNLTTYNIVLKGYFRAGQIEEAWRFFLEMKKRKCEIDVVT 279
+ + + A+++ +MV P++ +N +L + + E +M+ D+ T
Sbjct: 61 IIKVDDAVDLFGDMVKSRPFPSIVEFNKLLSAVAKMNKFELVISLGEQMQTLGISHDLYT 120
Query: 280 YTTIVHGFGVVGEIKRARNVFDGMVNGGVLPSVATYNAMIQVLCKKDSVENAILVFEEMV 339
Y+ ++ F ++ A V M+ G P + T ++++ C + +A+ + ++MV
Sbjct: 121 YSIFINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLSSLLNGYCHSKRISDAVALVDQMV 180
Query: 340 GKGYMPNSTTYNVVIRGLCHTGEMERALEFVGRMKDDECEPNVQTYNILIRYFCDAGEIE 399
GY P++ T+ +I GL + A+ V +M C+P++ TY ++ C G+I+
Sbjct: 181 EMGYKPDTFTFTTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYGTVVNGLCKRGDID 240
Query: 400 RGLELFEKMGSGVCLPNLDTYNILISSMFVRKKSDDLLVAGKLLIEMVDRGFMPRKFTFN 459
L L KM + N+ +N +I S+ K + VA L EM +G P T+N
Sbjct: 241 LALNLLNKMEAARIKANVVIFNTIIDSLC---KYRHVEVAVDLFTEMETKGIRPNVVTYN 297
Query: 460 RVLNGLLLIGNQGLAKEIL 478
++N L G A +L
Sbjct: 298 SLINCLCNYGRWSDASRLL 316
>sp|O81908|PPR2_ARATH Pentatricopeptide repeat-containing protein At1g02060,
chloroplastic OS=Arabidopsis thaliana GN=At1g02060 PE=2
SV=2
Length = 710
Score = 165 bits (417), Expect = 8e-40, Method: Compositional matrix adjust.
Identities = 125/463 (26%), Positives = 215/463 (46%), Gaps = 58/463 (12%)
Query: 78 RLWNHALKALHFFNILSYHPTYAHSPSSFDHAIDLAARLRDYRTVWTLVHRMKSLSLGPT 137
RL L FF+ +S + ++H SF ++ R R+ + ++ S G
Sbjct: 76 RLIKVPADGLRFFDWVS-NKGFSHKEQSFFLMLEFLGRARNLNVARNFLFSIERRSNGCV 134
Query: 138 Q---KTFAIIAERYVSAGKADRAVKIFLSMHEHGCRQSLNSFNTILDLLCKEKKVEKAYN 194
+ + F + Y +AG +VK+F +M + G S+ +FN++L +L K + A++
Sbjct: 135 KLQDRYFNSLIRSYGNAGLFQESVKLFQTMKQMGISPSVLTFNSLLSILLKRGRTGMAHD 194
Query: 195 LFKVFRGKFKA--DVISYNVIANGWCLVKRTNKALEVLKEMVDRGLNPNLTTYNIVLKGY 252
LF R + D ++N + NG+C ++A + K+M NP++ TYN ++ G
Sbjct: 195 LFDEMRRTYGVTPDSYTFNTLINGFCKNSMVDEAFRIFKDMELYHCNPDVVTYNTIIDGL 254
Query: 253 FRAGQIEEAWRFFLEMKKRKCEI--DVVTYTTIVHGFGVVGEIKRARNVFDGMVNGGVLP 310
RAG+++ A M K+ ++ +VV+YTT+V G+ + EI A VF M++ G+ P
Sbjct: 255 CRAGKVKIAHNVLSGMLKKATDVHPNVVSYTTLVRGYCMKQEIDEAVLVFHDMLSRGLKP 314
Query: 311 SVATYNAMIQVL-------------------------------------CKKDSVENAIL 333
+ TYN +I+ L C ++ A+
Sbjct: 315 NAVTYNTLIKGLSEAHRYDEIKDILIGGNDAFTTFAPDACTFNILIKAHCDAGHLDAAMK 374
Query: 334 VFEEMVGKGYMPNSTTYNVVIRGLCHTGEMERALEFVGRMKD-------DECEPNVQTYN 386
VF+EM+ P+S +Y+V+IR LC E +RA + + DEC+P YN
Sbjct: 375 VFQEMLNMKLHPDSASYSVLIRTLCMRNEFDRAETLFNELFEKEVLLGKDECKPLAAAYN 434
Query: 387 ILIRYFCDAGEIERGLELFEK-MGSGVCLPNLDTYNILISSMFVRKKSDDLLVAGKLLIE 445
+ Y C G+ ++ ++F + M GV P +Y LI+ + A +LL+
Sbjct: 435 PMFEYLCANGKTKQAEKVFRQLMKRGVQDP--PSYKTLITG---HCREGKFKPAYELLVL 489
Query: 446 MVDRGFMPRKFTFNRVLNGLLLIGNQGLAKEILRLQSRCGRLP 488
M+ R F+P T+ +++GLL IG LA + L+ R LP
Sbjct: 490 MLRREFVPDLETYELLIDGLLKIGEALLAHDTLQRMLRSSYLP 532
Score = 133 bits (335), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 96/352 (27%), Positives = 163/352 (46%), Gaps = 24/352 (6%)
Query: 130 KSLSLGPTQKTFAIIAERYVSAGKADRAVKIFLSMHEHGCRQSLNSFNTILDLLCKEKKV 189
++ + P TF + + D A +IF M + C + ++NTI+D LC+ KV
Sbjct: 201 RTYGVTPDSYTFNTLINGFCKNSMVDEAFRIFKDMELYHCNPDVVTYNTIIDGLCRAGKV 260
Query: 190 EKAYNLFKVFRGKFKA------DVISYNVIANGWCLVKRTNKALEVLKEMVDRGLNPNLT 243
+ A+N V G K +V+SY + G+C+ + ++A+ V +M+ RGL PN
Sbjct: 261 KIAHN---VLSGMLKKATDVHPNVVSYTTLVRGYCMKQEIDEAVLVFHDMLSRGLKPNAV 317
Query: 244 TYNIVLKGYFRAGQIEEAWRFFLEMKKRKCEI--DVVTYTTIVHGFGVVGEIKRARNVFD 301
TYN ++KG A + +E + D T+ ++ G + A VF
Sbjct: 318 TYNTLIKGLSEAHRYDEIKDILIGGNDAFTTFAPDACTFNILIKAHCDAGHLDAAMKVFQ 377
Query: 302 GMVNGGVLPSVATYNAMIQVLCKKDSVENAILVFEEMVGKGYM-------PNSTTYNVVI 354
M+N + P A+Y+ +I+ LC ++ + A +F E+ K + P + YN +
Sbjct: 378 EMLNMKLHPDSASYSVLIRTLCMRNEFDRAETLFNELFEKEVLLGKDECKPLAAAYNPMF 437
Query: 355 RGLCHTGEMERALE-FVGRMKDDECEPNVQTYNILIRYFCDAGEIERGLELFEKMGSGVC 413
LC G+ ++A + F MK +P +Y LI C G+ + EL M
Sbjct: 438 EYLCANGKTKQAEKVFRQLMKRGVQDP--PSYKTLITGHCREGKFKPAYELLVLMLRREF 495
Query: 414 LPNLDTYNILISSMFVRKKSDDLLVAGKLLIEMVDRGFMPRKFTFNRVLNGL 465
+P+L+TY +LI + K + L+A L M+ ++P TF+ VL L
Sbjct: 496 VPDLETYELLIDGLL---KIGEALLAHDTLQRMLRSSYLPVATTFHSVLAEL 544
Score = 82.4 bits (202), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 73/326 (22%), Positives = 144/326 (44%), Gaps = 15/326 (4%)
Query: 133 SLGPTQKTFAIIAERYVSAGKADRAVKIFLSMHEHGCRQSLNSFNTILDLLCKEKKVEKA 192
+ P TF I+ + + AG D A+K+F M S++ ++ LC + ++A
Sbjct: 348 TFAPDACTFNILIKAHCDAGHLDAAMKVFQEMLNMKLHPDSASYSVLIRTLCMRNEFDRA 407
Query: 193 YNLF------KVFRGK--FKADVISYNVIANGWCLVKRTNKALEVLKEMVDRGLNPNLTT 244
LF +V GK K +YN + C +T +A +V ++++ RG+ + +
Sbjct: 408 ETLFNELFEKEVLLGKDECKPLAAAYNPMFEYLCANGKTKQAEKVFRQLMKRGVQ-DPPS 466
Query: 245 YNIVLKGYFRAGQIEEAWRFFLEMKKRKCEIDVVTYTTIVHGFGVVGEIKRARNVFDGMV 304
Y ++ G+ R G+ + A+ + M +R+ D+ TY ++ G +GE A + M+
Sbjct: 467 YKTLITGHCREGKFKPAYELLVLMLRREFVPDLETYELLIDGLLKIGEALLAHDTLQRML 526
Query: 305 NGGVLPSVATYNAMIQVLCKKDSVENAILVFEEMVGKGYMPNSTTYNVVIRGLCHTGEME 364
LP T+++++ L K+ + + M+ K N V+R L + + E
Sbjct: 527 RSSYLPVATTFHSVLAELAKRKFANESFCLVTLMLEKRIRQNIDLSTQVVRLLFSSAQKE 586
Query: 365 RALEFVGRMKDDECEPNVQTYNILIRYFCDAGEIERGLELFEKMGSGVCLPNLDTYNILI 424
+A V + D+ ++ L+ Y C+ ++ L + ++DT N +I
Sbjct: 587 KAFLIVRLLYDNGYLVKMEE---LLGYLCENRKLLDAHTLVLFCLEKSQMVDIDTCNTVI 643
Query: 425 SSMFVRKKSDDLLVAGKLLIEMVDRG 450
+ K+ + A L E+V+ G
Sbjct: 644 EGLCKHKRHSE---AFSLYNELVELG 666
Score = 35.8 bits (81), Expect = 0.76, Method: Compositional matrix adjust.
Identities = 27/112 (24%), Positives = 55/112 (49%), Gaps = 4/112 (3%)
Query: 150 SAGKADRAVKIFLSMHEHGCRQSLNSFNTILDLLCKEKKVEKAYNLFKVFRGKFK-ADVI 208
S+ + ++A I ++++G L +L LC+ +K+ A+ L K + D+
Sbjct: 581 SSAQKEKAFLIVRLLYDNG---YLVKMEELLGYLCENRKLLDAHTLVLFCLEKSQMVDID 637
Query: 209 SYNVIANGWCLVKRTNKALEVLKEMVDRGLNPNLTTYNIVLKGYFRAGQIEE 260
+ N + G C KR ++A + E+V+ G + L+ + ++ AG+ EE
Sbjct: 638 TCNTVIEGLCKHKRHSEAFSLYNELVELGNHQQLSCHVVLRNALEAAGKWEE 689
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.325 0.139 0.423
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 181,921,261
Number of Sequences: 539616
Number of extensions: 7740150
Number of successful extensions: 35597
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 436
Number of HSP's successfully gapped in prelim test: 75
Number of HSP's that attempted gapping in prelim test: 26361
Number of HSP's gapped (non-prelim): 2827
length of query: 493
length of database: 191,569,459
effective HSP length: 122
effective length of query: 371
effective length of database: 125,736,307
effective search space: 46648169897
effective search space used: 46648169897
T: 11
A: 40
X1: 15 ( 7.0 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.6 bits)
S2: 63 (28.9 bits)