Query 011138
Match_columns 492
No_of_seqs 448 out of 3115
Neff 8.9
Searched_HMMs 46136
Date Fri Mar 29 08:32:41 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/011138.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/011138hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 KOG0658 Glycogen synthase kina 100.0 2.7E-75 5.8E-80 553.0 23.3 346 121-492 8-353 (364)
2 KOG0593 Predicted protein kina 100.0 1.6E-60 3.6E-65 439.4 17.6 279 138-427 3-291 (396)
3 KOG0661 MAPK related serine/th 100.0 3.3E-60 7.1E-65 461.3 15.5 283 136-428 9-299 (538)
4 KOG0615 Serine/threonine prote 100.0 9.6E-60 2.1E-64 450.8 14.5 256 137-427 172-444 (475)
5 KOG0659 Cdk activating kinase 100.0 4.2E-58 9.1E-63 416.9 22.0 276 138-427 3-288 (318)
6 PTZ00036 glycogen synthase kin 100.0 7.5E-57 1.6E-61 467.1 30.9 311 137-448 66-380 (440)
7 KOG0575 Polo-like serine/threo 100.0 2.4E-57 5.2E-62 454.8 24.7 251 137-428 18-277 (592)
8 KOG0660 Mitogen-activated prot 100.0 7.7E-58 1.7E-62 433.2 19.7 289 138-433 23-323 (359)
9 KOG0663 Protein kinase PITSLRE 100.0 3E-57 6.5E-62 422.9 20.3 285 136-428 75-369 (419)
10 KOG0600 Cdc2-related protein k 100.0 3.6E-57 7.9E-62 443.0 20.9 284 133-425 113-405 (560)
11 KOG0598 Ribosomal protein S6 k 100.0 3.2E-55 7E-60 416.9 19.7 254 135-428 23-289 (357)
12 KOG0592 3-phosphoinositide-dep 100.0 2.3E-54 4.9E-59 426.6 23.9 255 134-429 70-347 (604)
13 KOG0616 cAMP-dependent protein 100.0 2.4E-54 5.3E-59 397.8 18.6 252 134-428 41-305 (355)
14 KOG0581 Mitogen-activated prot 100.0 2.7E-54 5.8E-59 410.8 18.0 258 138-430 80-345 (364)
15 KOG0594 Protein kinase PCTAIRE 100.0 2E-53 4.4E-58 404.5 22.5 290 137-430 11-312 (323)
16 KOG0033 Ca2+/calmodulin-depend 100.0 3.2E-56 7E-61 399.7 2.2 288 135-458 9-305 (355)
17 KOG0605 NDR and related serine 100.0 5.6E-53 1.2E-57 417.1 22.7 257 135-429 139-454 (550)
18 KOG0588 Serine/threonine prote 100.0 5.3E-53 1.2E-57 424.9 19.6 253 138-430 13-273 (786)
19 KOG0610 Putative serine/threon 100.0 2.2E-52 4.8E-57 400.8 21.3 259 135-429 75-401 (459)
20 KOG0667 Dual-specificity tyros 100.0 3.5E-52 7.6E-57 422.0 23.9 280 138-428 187-510 (586)
21 KOG0595 Serine/threonine-prote 100.0 3E-52 6.4E-57 399.9 20.2 255 136-426 9-274 (429)
22 KOG0583 Serine/threonine prote 100.0 6.9E-52 1.5E-56 415.9 23.6 250 136-425 16-280 (370)
23 KOG0591 NIMA (never in mitosis 100.0 4.1E-53 8.8E-58 386.8 7.1 255 137-428 19-284 (375)
24 KOG0585 Ca2+/calmodulin-depend 100.0 1.2E-50 2.5E-55 394.1 21.1 259 132-426 92-378 (576)
25 KOG0694 Serine/threonine prote 100.0 1.2E-50 2.5E-55 411.0 21.5 255 133-428 364-632 (694)
26 cd07871 STKc_PCTAIRE3 Catalyti 100.0 1.2E-49 2.5E-54 391.2 26.7 276 137-423 5-288 (288)
27 KOG0597 Serine-threonine prote 100.0 6.5E-51 1.4E-55 402.4 16.3 250 137-427 2-258 (808)
28 KOG0580 Serine/threonine prote 100.0 1.4E-50 3.1E-55 362.8 14.6 252 135-426 20-279 (281)
29 KOG0198 MEKK and related serin 100.0 2E-50 4.3E-55 390.5 16.6 256 137-427 17-283 (313)
30 KOG0662 Cyclin-dependent kinas 100.0 1.4E-49 3.1E-54 341.6 16.4 277 138-427 3-290 (292)
31 KOG0032 Ca2+/calmodulin-depend 100.0 4.5E-49 9.8E-54 395.4 22.5 254 137-427 35-300 (382)
32 KOG0599 Phosphorylase kinase g 100.0 1.1E-50 2.4E-55 369.2 9.5 255 138-428 18-291 (411)
33 cd07869 STKc_PFTAIRE1 Catalyti 100.0 1.9E-48 4.1E-53 385.3 25.8 281 137-427 5-295 (303)
34 cd07859 STKc_TDY_MAPK_plant Ca 100.0 3.2E-48 6.9E-53 389.3 25.4 285 138-429 1-299 (338)
35 cd07848 STKc_CDKL5 Catalytic d 100.0 8E-48 1.7E-52 377.5 26.4 275 138-423 2-287 (287)
36 PTZ00284 protein kinase; Provi 100.0 2.9E-47 6.2E-52 399.1 31.8 282 136-428 128-446 (467)
37 KOG0578 p21-activated serine/t 100.0 5.6E-49 1.2E-53 391.6 17.6 251 138-426 274-529 (550)
38 cd07862 STKc_CDK6 Catalytic do 100.0 1.4E-47 3.1E-52 376.3 25.5 279 138-423 2-290 (290)
39 KOG4717 Serine/threonine prote 100.0 1.4E-48 3E-53 381.7 17.1 256 136-429 17-279 (864)
40 cd07872 STKc_PCTAIRE2 Catalyti 100.0 2.7E-47 5.8E-52 378.2 26.4 280 137-427 6-293 (309)
41 KOG0582 Ste20-like serine/thre 100.0 1.3E-47 2.8E-52 370.7 23.0 272 130-429 19-302 (516)
42 cd07875 STKc_JNK1 Catalytic do 100.0 5.6E-47 1.2E-51 384.6 28.6 287 137-432 24-330 (364)
43 cd07876 STKc_JNK2 Catalytic do 100.0 4.2E-47 9.1E-52 384.8 25.5 284 137-430 21-325 (359)
44 cd07863 STKc_CDK4 Catalytic do 100.0 8.2E-47 1.8E-51 370.3 26.4 279 138-423 1-288 (288)
45 cd07853 STKc_NLK Catalytic dom 100.0 3.2E-47 6.9E-52 387.5 23.6 280 139-427 2-295 (372)
46 cd05612 STKc_PRKX_like Catalyt 100.0 3.7E-47 8E-52 374.0 22.6 248 138-428 2-262 (291)
47 KOG0611 Predicted serine/threo 100.0 2.8E-48 6E-53 370.2 13.6 247 137-424 53-307 (668)
48 cd07874 STKc_JNK3 Catalytic do 100.0 1E-46 2.2E-51 381.4 25.7 284 137-429 17-320 (355)
49 cd05631 STKc_GRK4 Catalytic do 100.0 6.8E-47 1.5E-51 371.0 23.0 256 139-428 2-269 (285)
50 PTZ00263 protein kinase A cata 100.0 5.5E-47 1.2E-51 379.3 22.7 249 136-427 17-278 (329)
51 cd07868 STKc_CDK8 Catalytic do 100.0 1.3E-46 2.9E-51 374.4 25.2 278 142-423 6-317 (317)
52 PHA03212 serine/threonine kina 100.0 5.9E-47 1.3E-51 387.1 22.3 277 136-429 91-385 (391)
53 cd05571 STKc_PKB Catalytic dom 100.0 5.7E-47 1.2E-51 378.3 21.4 245 143-428 1-259 (323)
54 cd07873 STKc_PCTAIRE1 Catalyti 100.0 4.2E-46 9.1E-51 368.1 27.1 282 137-429 6-295 (301)
55 KOG0666 Cyclin C-dependent kin 100.0 6.9E-48 1.5E-52 356.7 13.1 284 137-426 24-343 (438)
56 cd07878 STKc_p38beta_MAPK11 Ca 100.0 1.8E-46 3.9E-51 377.8 24.3 284 137-430 15-308 (343)
57 cd07849 STKc_ERK1_2_like Catal 100.0 4.2E-46 9.1E-51 374.1 26.2 320 137-492 5-336 (336)
58 cd05628 STKc_NDR1 Catalytic do 100.0 4.3E-46 9.3E-51 378.0 23.9 253 138-428 2-301 (363)
59 PTZ00426 cAMP-dependent protei 100.0 4.7E-46 1E-50 374.0 22.5 251 135-428 28-292 (340)
60 cd05599 STKc_NDR_like Catalyti 100.0 4.5E-46 9.8E-51 377.9 22.2 253 138-428 2-304 (364)
61 KOG0690 Serine/threonine prote 100.0 4.2E-47 9.1E-52 353.2 13.1 256 135-430 166-434 (516)
62 KOG0604 MAP kinase-activated p 100.0 2.3E-47 5E-52 351.8 11.2 264 138-428 62-330 (400)
63 cd07839 STKc_CDK5 Catalytic do 100.0 2E-45 4.3E-50 359.8 24.8 276 138-423 1-284 (284)
64 cd05585 STKc_YPK1_like Catalyt 100.0 8.9E-46 1.9E-50 367.9 22.0 242 145-427 1-254 (312)
65 cd05629 STKc_NDR_like_fungal C 100.0 8E-46 1.7E-50 377.9 22.2 252 138-427 2-312 (377)
66 cd05593 STKc_PKB_gamma Catalyt 100.0 1.1E-45 2.3E-50 369.8 21.7 245 143-427 1-258 (328)
67 cd07867 STKc_CDC2L6 Catalytic 100.0 3.8E-45 8.3E-50 363.7 25.3 277 142-423 6-317 (317)
68 cd07861 STKc_CDK1_euk Catalyti 100.0 3.7E-45 8.1E-50 357.9 24.7 276 138-423 1-285 (285)
69 cd05595 STKc_PKB_beta Catalyti 100.0 1.5E-45 3.3E-50 368.0 22.1 245 143-427 1-258 (323)
70 cd05600 STKc_Sid2p_Dbf2p Catal 100.0 2E-45 4.4E-50 368.6 23.1 255 138-427 2-264 (333)
71 cd05596 STKc_ROCK Catalytic do 100.0 2.1E-45 4.5E-50 373.7 23.4 256 135-427 41-311 (370)
72 cd05625 STKc_LATS1 Catalytic d 100.0 1.4E-45 3.1E-50 376.7 22.3 252 138-427 2-312 (382)
73 cd05626 STKc_LATS2 Catalytic d 100.0 2.5E-45 5.4E-50 374.8 23.8 254 138-428 2-313 (381)
74 cd05573 STKc_ROCK_NDR_like Cat 100.0 1.6E-45 3.4E-50 371.8 21.9 253 138-428 2-293 (350)
75 cd07858 STKc_TEY_MAPK_plant Ca 100.0 5E-45 1.1E-49 366.4 25.3 318 137-490 5-332 (337)
76 cd05589 STKc_PKN Catalytic dom 100.0 3E-45 6.5E-50 366.0 23.4 248 139-427 1-264 (324)
77 cd05590 STKc_nPKC_eta Catalyti 100.0 3.4E-45 7.3E-50 365.0 22.8 246 143-428 1-261 (320)
78 KOG0192 Tyrosine kinase specif 100.0 4.3E-45 9.2E-50 363.7 22.6 246 139-419 43-298 (362)
79 cd05601 STKc_CRIK Catalytic do 100.0 1.7E-45 3.7E-50 368.6 19.9 255 138-428 2-271 (330)
80 cd05621 STKc_ROCK2 Catalytic d 100.0 4E-45 8.7E-50 371.3 22.7 255 135-426 41-310 (370)
81 cd05598 STKc_LATS Catalytic do 100.0 2E-45 4.3E-50 374.9 20.5 252 138-427 2-308 (376)
82 PLN00034 mitogen-activated pro 100.0 1.3E-44 2.8E-49 365.7 26.0 254 135-427 72-335 (353)
83 cd05594 STKc_PKB_alpha Catalyt 100.0 1.8E-45 3.9E-50 367.8 19.5 247 143-428 1-260 (325)
84 PHA03207 serine/threonine kina 100.0 1.6E-44 3.4E-49 370.1 26.5 277 137-426 92-381 (392)
85 KOG0201 Serine/threonine prote 100.0 1.4E-46 2.9E-51 363.6 10.3 252 137-427 13-270 (467)
86 cd07845 STKc_CDK10 Catalytic d 100.0 2.3E-44 5.1E-49 357.0 26.5 284 136-428 6-298 (309)
87 cd05614 STKc_MSK2_N N-terminal 100.0 4.7E-45 1E-49 365.8 21.6 254 138-427 1-274 (332)
88 cd05605 STKc_GRK4_like Catalyt 100.0 1.1E-44 2.3E-49 355.4 23.6 255 139-427 2-268 (285)
89 cd05587 STKc_cPKC Catalytic do 100.0 8.9E-45 1.9E-49 362.6 23.4 249 138-427 1-264 (324)
90 PHA03209 serine/threonine kina 100.0 6.9E-45 1.5E-49 368.2 22.7 277 137-426 66-357 (357)
91 cd07837 STKc_CdkB_plant Cataly 100.0 2.7E-44 5.9E-49 353.7 26.3 285 138-424 2-295 (295)
92 cd05591 STKc_nPKC_epsilon Cata 100.0 6.3E-45 1.4E-49 363.2 21.9 244 143-427 1-261 (321)
93 cd07850 STKc_JNK Catalytic dom 100.0 2.7E-44 5.9E-49 363.4 26.4 287 137-432 16-323 (353)
94 cd05608 STKc_GRK1 Catalytic do 100.0 1.1E-44 2.4E-49 354.4 22.7 251 145-428 1-265 (280)
95 cd07832 STKc_CCRK Catalytic do 100.0 3.1E-44 6.7E-49 351.4 25.2 276 138-424 1-286 (286)
96 cd05570 STKc_PKC Catalytic dom 100.0 1.3E-44 2.8E-49 360.5 22.4 246 143-428 1-260 (318)
97 cd05584 STKc_p70S6K Catalytic 100.0 1.4E-44 3E-49 361.0 22.6 244 143-427 2-263 (323)
98 KOG0612 Rho-associated, coiled 100.0 7.4E-46 1.6E-50 391.7 13.7 257 135-428 73-346 (1317)
99 cd05588 STKc_aPKC Catalytic do 100.0 1.4E-44 3E-49 362.0 22.3 246 143-428 1-270 (329)
100 cd05620 STKc_nPKC_delta Cataly 100.0 1.8E-44 3.8E-49 359.2 22.8 244 143-427 1-255 (316)
101 cd05627 STKc_NDR2 Catalytic do 100.0 1.1E-44 2.4E-49 367.2 21.1 253 138-428 2-301 (360)
102 cd05597 STKc_DMPK_like Catalyt 100.0 4.5E-44 9.8E-49 358.6 25.1 257 138-428 2-274 (331)
103 cd05616 STKc_cPKC_beta Catalyt 100.0 2.3E-44 5E-49 359.5 22.9 249 138-427 1-264 (323)
104 cd05622 STKc_ROCK1 Catalytic d 100.0 2.5E-44 5.4E-49 365.8 23.4 256 135-427 41-311 (371)
105 KOG0589 Serine/threonine prote 100.0 2.2E-45 4.8E-50 364.0 14.8 254 137-427 4-265 (426)
106 cd06649 PKc_MEK2 Catalytic dom 100.0 4.2E-44 9.2E-49 358.8 24.0 275 137-427 5-308 (331)
107 KOG0986 G protein-coupled rece 100.0 2E-45 4.4E-50 355.5 13.7 263 132-428 180-454 (591)
108 cd05592 STKc_nPKC_theta_delta 100.0 3.7E-44 7.9E-49 356.9 22.7 244 143-427 1-255 (316)
109 cd07847 STKc_CDKL1_4 Catalytic 100.0 1.7E-43 3.6E-48 346.2 27.0 276 138-423 2-286 (286)
110 KOG0669 Cyclin T-dependent kin 100.0 3E-46 6.4E-51 336.8 6.8 283 138-425 18-320 (376)
111 cd05575 STKc_SGK Catalytic dom 100.0 2E-44 4.3E-49 359.9 20.7 245 143-428 1-259 (323)
112 PHA03211 serine/threonine kina 100.0 4E-44 8.6E-49 371.4 23.6 274 137-425 169-460 (461)
113 cd05619 STKc_nPKC_theta Cataly 100.0 5.3E-44 1.2E-48 355.7 22.8 245 143-428 1-256 (316)
114 cd07831 STKc_MOK Catalytic dom 100.0 1.3E-43 2.7E-48 346.4 24.9 275 139-423 1-282 (282)
115 cd07841 STKc_CDK7 Catalytic do 100.0 1.5E-43 3.2E-48 349.1 25.3 281 138-429 1-291 (298)
116 cd07842 STKc_CDK8_like Catalyt 100.0 1.2E-43 2.7E-48 352.4 24.8 281 138-423 1-316 (316)
117 cd05618 STKc_aPKC_iota Catalyt 100.0 4.4E-44 9.6E-49 358.3 21.7 246 143-427 1-269 (329)
118 cd07843 STKc_CDC2L1 Catalytic 100.0 1E-43 2.2E-48 349.6 23.5 279 137-423 5-293 (293)
119 cd05586 STKc_Sck1_like Catalyt 100.0 1.5E-44 3.3E-49 361.8 18.0 244 145-427 1-260 (330)
120 KOG0607 MAP kinase-interacting 100.0 6.7E-45 1.5E-49 337.9 14.1 257 138-429 78-370 (463)
121 cd05623 STKc_MRCK_alpha Cataly 100.0 1.3E-43 2.8E-48 355.4 24.7 256 138-427 2-273 (332)
122 PLN00009 cyclin-dependent kina 100.0 1.8E-43 3.9E-48 347.9 25.2 282 137-428 2-292 (294)
123 cd05582 STKc_RSK_N N-terminal 100.0 1.9E-44 4E-49 359.3 18.2 244 143-427 2-261 (318)
124 cd07844 STKc_PCTAIRE_like Cata 100.0 2.2E-43 4.8E-48 346.7 25.5 276 137-423 5-291 (291)
125 cd07860 STKc_CDK2_3 Catalytic 100.0 1.4E-43 3.1E-48 346.7 24.0 275 138-423 1-284 (284)
126 cd05615 STKc_cPKC_alpha Cataly 100.0 1.3E-43 2.9E-48 354.0 23.8 248 139-427 2-264 (323)
127 cd07855 STKc_ERK5 Catalytic do 100.0 1.6E-43 3.5E-48 355.0 24.3 288 137-432 5-306 (334)
128 KOG0596 Dual specificity; seri 100.0 7.8E-44 1.7E-48 352.0 21.0 252 138-426 362-633 (677)
129 cd05602 STKc_SGK1 Catalytic do 100.0 7.9E-44 1.7E-48 355.9 21.3 244 143-427 1-258 (325)
130 cd05604 STKc_SGK3 Catalytic do 100.0 4.4E-44 9.6E-49 357.7 19.5 245 143-427 1-258 (325)
131 cd05630 STKc_GRK6 Catalytic do 100.0 1.5E-43 3.3E-48 347.2 22.6 254 139-427 2-268 (285)
132 KOG0671 LAMMER dual specificit 100.0 4.3E-45 9.3E-50 347.5 11.1 281 136-427 88-413 (415)
133 cd05603 STKc_SGK2 Catalytic do 100.0 8.2E-44 1.8E-48 355.2 20.8 246 143-428 1-259 (321)
134 cd05607 STKc_GRK7 Catalytic do 100.0 1.7E-43 3.7E-48 345.4 22.4 250 145-428 1-262 (277)
135 PTZ00283 serine/threonine prot 100.0 1.7E-43 3.7E-48 371.6 23.4 260 137-427 32-304 (496)
136 PTZ00266 NIMA-related protein 100.0 3.2E-43 7E-48 382.0 26.1 263 135-429 11-304 (1021)
137 cd05624 STKc_MRCK_beta Catalyt 100.0 1.5E-43 3.2E-48 354.9 21.7 256 138-427 2-273 (331)
138 cd05617 STKc_aPKC_zeta Catalyt 100.0 1.7E-43 3.7E-48 353.8 22.1 245 143-427 1-267 (327)
139 cd07836 STKc_Pho85 Catalytic d 100.0 5E-43 1.1E-47 342.7 24.7 276 138-423 1-284 (284)
140 cd07870 STKc_PFTAIRE2 Catalyti 100.0 1.1E-42 2.3E-47 342.0 26.6 276 137-423 5-291 (291)
141 KOG0193 Serine/threonine prote 100.0 7E-44 1.5E-48 356.3 18.2 251 132-419 387-648 (678)
142 cd05632 STKc_GRK5 Catalytic do 100.0 5.3E-43 1.1E-47 343.4 24.2 255 139-427 2-268 (285)
143 PTZ00267 NIMA-related protein 100.0 2E-43 4.4E-48 370.5 22.5 253 138-426 68-329 (478)
144 PF00069 Pkinase: Protein kina 100.0 1.5E-43 3.3E-48 341.3 19.7 252 139-423 1-260 (260)
145 KOG0579 Ste20-like serine/thre 100.0 5.9E-45 1.3E-49 363.3 10.0 254 138-426 33-295 (1187)
146 cd07834 STKc_MAPK Catalytic do 100.0 6.3E-43 1.4E-47 349.9 24.2 289 138-433 1-302 (330)
147 cd07854 STKc_MAPK4_6 Catalytic 100.0 1.1E-42 2.4E-47 350.2 25.9 286 137-429 5-309 (342)
148 cd07846 STKc_CDKL2_3 Catalytic 100.0 7.7E-43 1.7E-47 341.7 23.9 276 138-423 2-286 (286)
149 cd07865 STKc_CDK9 Catalytic do 100.0 1.6E-42 3.4E-47 343.3 26.3 282 137-423 12-310 (310)
150 cd07866 STKc_BUR1 Catalytic do 100.0 1.7E-42 3.7E-47 343.2 26.2 281 136-423 7-311 (311)
151 cd06650 PKc_MEK1 Catalytic dom 100.0 4.3E-43 9.4E-48 351.8 21.7 278 137-427 5-306 (333)
152 cd07835 STKc_CDK1_like Catalyt 100.0 1.6E-42 3.4E-47 339.1 24.9 274 139-423 1-283 (283)
153 KOG1290 Serine/threonine prote 100.0 2E-42 4.4E-47 337.5 25.1 293 131-429 72-559 (590)
154 KOG0983 Mitogen-activated prot 100.0 2.8E-43 6E-48 321.0 17.3 261 132-427 87-356 (391)
155 KOG4236 Serine/threonine prote 100.0 1.8E-44 3.9E-49 353.7 10.1 249 142-427 569-826 (888)
156 cd07833 STKc_CDKL Catalytic do 100.0 2.6E-42 5.6E-47 338.1 25.2 276 138-423 2-288 (288)
157 cd07857 STKc_MPK1 Catalytic do 100.0 3.3E-42 7.1E-47 345.2 26.3 286 138-431 1-303 (332)
158 cd07879 STKc_p38delta_MAPK13 C 100.0 3.8E-42 8.1E-47 346.3 26.2 283 137-430 15-307 (342)
159 PTZ00024 cyclin-dependent prot 100.0 2.6E-42 5.6E-47 346.3 24.8 277 138-428 9-321 (335)
160 cd06625 STKc_MEKK3_like Cataly 100.0 2.4E-42 5.1E-47 333.9 23.2 247 138-423 3-263 (263)
161 cd06617 PKc_MKK3_6 Catalytic d 100.0 2.2E-42 4.8E-47 337.9 23.2 256 138-427 2-268 (283)
162 KOG0586 Serine/threonine prote 100.0 1.9E-43 4.1E-48 355.0 15.9 262 134-435 53-321 (596)
163 KOG1989 ARK protein kinase fam 100.0 3.7E-43 8E-48 367.0 18.1 248 137-419 37-306 (738)
164 cd05118 STKc_CMGC Catalytic do 100.0 2.2E-42 4.8E-47 337.6 22.5 274 139-423 1-283 (283)
165 cd07852 STKc_MAPK15 Catalytic 100.0 2.3E-42 4.9E-47 347.1 23.0 286 136-432 6-307 (337)
166 cd06622 PKc_MAPKK_PBS2_like Ca 100.0 2.3E-42 5E-47 338.6 22.1 260 138-429 2-271 (286)
167 cd05574 STKc_phototropin_like 100.0 6.8E-42 1.5E-46 340.3 25.8 259 138-433 2-302 (316)
168 KOG4279 Serine/threonine prote 100.0 1.5E-43 3.3E-48 356.5 13.4 251 144-426 582-838 (1226)
169 cd07830 STKc_MAK_like Catalyti 100.0 5.6E-42 1.2E-46 335.1 24.2 275 139-423 1-283 (283)
170 cd06639 STKc_myosinIIIB Cataly 100.0 9.9E-42 2.1E-46 335.1 26.1 261 136-424 21-291 (291)
171 cd07840 STKc_CDK9_like Catalyt 100.0 4.1E-42 8.9E-47 336.2 23.1 277 139-423 1-287 (287)
172 cd08227 PK_STRAD_alpha Pseudok 100.0 2.5E-42 5.5E-47 345.3 21.9 275 141-427 2-314 (327)
173 cd07877 STKc_p38alpha_MAPK14 C 100.0 7.4E-42 1.6E-46 344.5 25.1 285 137-431 17-311 (345)
174 cd07851 STKc_p38 Catalytic dom 100.0 5.8E-42 1.3E-46 345.0 24.2 284 137-430 15-308 (343)
175 KOG0574 STE20-like serine/thre 100.0 8E-45 1.7E-49 334.8 2.8 254 138-427 34-290 (502)
176 cd07829 STKc_CDK_like Catalyti 100.0 9.9E-42 2.1E-46 332.8 24.8 274 139-423 1-282 (282)
177 cd07880 STKc_p38gamma_MAPK12 C 100.0 9.9E-42 2.1E-46 343.3 25.3 285 136-430 14-308 (343)
178 cd05580 STKc_PKA Catalytic dom 100.0 1.1E-41 2.4E-46 334.7 24.8 248 138-428 2-262 (290)
179 cd07864 STKc_CDK12 Catalytic d 100.0 1.5E-41 3.3E-46 335.3 25.6 282 136-423 6-302 (302)
180 cd06637 STKc_TNIK Catalytic do 100.0 7.8E-42 1.7E-46 332.1 23.1 256 137-423 6-272 (272)
181 KOG0614 cGMP-dependent protein 100.0 1.2E-43 2.5E-48 347.0 9.7 253 138-429 421-686 (732)
182 KOG0577 Serine/threonine prote 100.0 2.2E-43 4.8E-48 350.1 11.8 249 139-427 28-285 (948)
183 cd07856 STKc_Sty1_Hog1 Catalyt 100.0 2E-41 4.4E-46 338.9 26.0 281 136-431 9-299 (328)
184 cd06619 PKc_MKK5 Catalytic dom 100.0 5.4E-42 1.2E-46 335.1 21.2 251 138-427 2-260 (279)
185 cd06638 STKc_myosinIIIA Cataly 100.0 1.5E-41 3.1E-46 332.8 24.3 262 134-423 15-286 (286)
186 cd05102 PTKc_VEGFR3 Catalytic 100.0 4.4E-42 9.6E-47 345.1 20.8 250 136-419 6-329 (338)
187 KOG0668 Casein kinase II, alph 100.0 2.2E-43 4.7E-48 314.2 9.8 282 137-429 38-331 (338)
188 KOG0603 Ribosomal protein S6 k 100.0 9.9E-43 2.2E-47 351.6 15.8 245 135-423 320-566 (612)
189 KOG0197 Tyrosine kinases [Sign 100.0 1.2E-42 2.5E-47 345.7 16.1 241 138-418 207-455 (468)
190 PHA03210 serine/threonine kina 100.0 9.1E-42 2E-46 359.5 23.3 282 136-427 147-461 (501)
191 KOG0665 Jun-N-terminal kinase 100.0 7.7E-43 1.7E-47 325.1 13.1 281 138-428 18-318 (369)
192 KOG2345 Serine/threonine prote 100.0 8.4E-43 1.8E-47 314.2 12.8 256 138-420 22-296 (302)
193 cd06654 STKc_PAK1 Catalytic do 100.0 2E-41 4.3E-46 334.1 23.5 252 137-427 20-277 (296)
194 cd06608 STKc_myosinIII_like Ca 100.0 2.8E-41 6E-46 328.1 24.0 262 134-423 3-275 (275)
195 cd06615 PKc_MEK Catalytic doma 100.0 2.1E-41 4.6E-46 335.8 23.4 277 138-427 2-294 (308)
196 cd06644 STKc_STK10_LOK Catalyt 100.0 1.7E-41 3.8E-46 333.6 22.5 257 137-428 12-277 (292)
197 cd06655 STKc_PAK2 Catalytic do 100.0 2.9E-41 6.4E-46 332.9 24.1 253 137-427 19-276 (296)
198 cd06616 PKc_MKK4 Catalytic dom 100.0 8.2E-42 1.8E-46 335.0 19.8 261 138-427 5-274 (288)
199 cd08223 STKc_Nek4 Catalytic do 100.0 5.8E-41 1.3E-45 323.0 25.3 249 138-423 1-257 (257)
200 cd07838 STKc_CDK4_6_like Catal 100.0 5.4E-41 1.2E-45 328.5 25.3 278 139-423 1-287 (287)
201 cd06630 STKc_MEKK1 Catalytic d 100.0 2.1E-41 4.5E-46 328.2 22.1 252 138-424 1-268 (268)
202 cd06610 STKc_OSR1_SPAK Catalyt 100.0 2.1E-41 4.6E-46 327.6 21.9 256 138-423 2-267 (267)
203 cd06609 STKc_MST3_like Catalyt 100.0 2E-41 4.3E-46 329.9 21.8 250 138-428 2-259 (274)
204 cd06643 STKc_SLK Catalytic dom 100.0 2.1E-41 4.5E-46 331.3 21.9 253 139-426 7-268 (282)
205 KOG0664 Nemo-like MAPK-related 100.0 1.8E-43 4E-48 322.0 6.6 281 141-428 57-351 (449)
206 cd06656 STKc_PAK3 Catalytic do 100.0 2.1E-41 4.6E-46 334.1 21.8 254 137-428 19-277 (297)
207 cd06651 STKc_MEKK3 Catalytic d 100.0 3.7E-41 8E-46 326.6 22.6 250 137-424 2-265 (266)
208 cd08220 STKc_Nek8 Catalytic do 100.0 5.5E-41 1.2E-45 322.9 23.5 249 138-423 1-256 (256)
209 cd06611 STKc_SLK_like Catalyti 100.0 1.8E-41 3.9E-46 331.2 20.4 256 137-427 5-269 (280)
210 cd06628 STKc_MAPKKK_Byr2_like 100.0 3.6E-41 7.8E-46 326.5 22.2 246 138-423 1-267 (267)
211 cd06636 STKc_MAP4K4_6 Catalyti 100.0 3.8E-41 8.2E-46 329.3 22.6 256 137-423 16-282 (282)
212 cd06646 STKc_MAP4K5 Catalytic 100.0 2.3E-41 4.9E-46 328.1 20.6 250 138-422 10-267 (267)
213 KOG4721 Serine/threonine prote 100.0 1.2E-42 2.5E-47 343.8 11.1 241 139-423 126-367 (904)
214 cd08529 STKc_FA2-like Catalyti 100.0 1.1E-40 2.4E-45 320.7 24.6 248 138-423 1-256 (256)
215 cd06631 STKc_YSK4 Catalytic do 100.0 6.8E-41 1.5E-45 324.3 23.0 247 138-423 1-265 (265)
216 cd06658 STKc_PAK5 Catalytic do 100.0 3E-41 6.4E-46 332.2 20.4 255 138-430 23-282 (292)
217 KOG0670 U4/U6-associated splic 100.0 3.1E-42 6.7E-47 337.8 13.2 279 138-425 433-751 (752)
218 cd06632 STKc_MEKK1_plant Catal 100.0 8.2E-41 1.8E-45 321.8 23.0 248 138-423 1-258 (258)
219 cd05578 STKc_Yank1 Catalytic d 100.0 5.4E-41 1.2E-45 323.7 21.4 247 138-423 1-258 (258)
220 KOG0696 Serine/threonine prote 100.0 2.8E-42 6.1E-47 329.8 12.1 254 135-428 347-614 (683)
221 cd06645 STKc_MAP4K3 Catalytic 100.0 3.9E-41 8.4E-46 326.4 20.2 251 137-422 9-267 (267)
222 cd08217 STKc_Nek2 Catalytic do 100.0 1.5E-40 3.2E-45 320.9 24.0 252 138-423 1-265 (265)
223 cd06612 STKc_MST1_2 Catalytic 100.0 7.2E-41 1.6E-45 322.0 21.6 251 137-423 3-256 (256)
224 PHA02988 hypothetical protein; 100.0 9.7E-41 2.1E-45 327.1 22.1 240 143-419 26-274 (283)
225 cd05633 STKc_GRK3 Catalytic do 100.0 9.5E-41 2.1E-45 326.4 22.0 247 144-427 1-262 (279)
226 cd05577 STKc_GRK Catalytic dom 100.0 1.2E-40 2.5E-45 325.2 22.4 249 145-428 1-262 (277)
227 cd06652 STKc_MEKK2 Catalytic d 100.0 1.8E-40 3.8E-45 321.6 23.3 249 138-424 3-265 (265)
228 cd06613 STKc_MAP4K3_like Catal 100.0 1.4E-40 3.1E-45 321.1 22.5 253 137-422 3-262 (262)
229 cd05572 STKc_cGK_PKG Catalytic 100.0 1.5E-40 3.3E-45 321.3 22.0 244 145-427 1-259 (262)
230 cd05609 STKc_MAST Catalytic do 100.0 2.9E-40 6.2E-45 327.1 24.4 253 138-428 2-281 (305)
231 cd06629 STKc_MAPKKK_Bck1_like 100.0 3E-40 6.4E-45 321.1 23.7 252 138-423 2-272 (272)
232 cd08218 STKc_Nek1 Catalytic do 100.0 3.4E-40 7.4E-45 317.7 23.1 248 138-423 1-256 (256)
233 cd06659 STKc_PAK6 Catalytic do 100.0 1.9E-40 4.2E-45 327.2 21.7 255 139-431 23-282 (297)
234 cd08221 STKc_Nek9 Catalytic do 100.0 5.9E-40 1.3E-44 316.0 24.4 248 138-423 1-256 (256)
235 cd08225 STKc_Nek5 Catalytic do 100.0 5E-40 1.1E-44 316.3 23.5 249 138-423 1-257 (257)
236 cd05606 STKc_beta_ARK Catalyti 100.0 3.1E-40 6.8E-45 322.5 22.2 247 144-427 1-262 (278)
237 cd05106 PTKc_CSF-1R Catalytic 100.0 2.2E-40 4.7E-45 337.2 21.5 249 136-419 37-367 (374)
238 cd06624 STKc_ASK Catalytic dom 100.0 6.3E-40 1.4E-44 318.2 23.8 246 143-423 14-268 (268)
239 KOG4645 MAPKKK (MAP kinase kin 100.0 2.4E-42 5.2E-47 369.4 7.1 257 136-429 1234-1503(1509)
240 cd05096 PTKc_DDR1 Catalytic do 100.0 3.8E-40 8.3E-45 326.0 22.2 253 137-418 5-299 (304)
241 cd06607 STKc_TAO Catalytic dom 100.0 4E-40 8.6E-45 326.4 22.3 250 138-427 16-274 (307)
242 KOG0584 Serine/threonine prote 100.0 1.6E-41 3.4E-46 341.6 12.3 249 141-426 44-302 (632)
243 cd08226 PK_STRAD_beta Pseudoki 100.0 1.3E-40 2.7E-45 333.2 18.3 277 143-428 4-316 (328)
244 cd06621 PKc_MAPKK_Pek1_like Ca 100.0 1.2E-39 2.5E-44 319.9 24.6 265 138-427 2-273 (287)
245 cd05611 STKc_Rim15_like Cataly 100.0 4.9E-40 1.1E-44 317.4 21.6 245 143-427 2-258 (260)
246 cd06642 STKc_STK25-YSK1 Cataly 100.0 1.1E-40 2.4E-45 325.2 16.8 250 138-427 5-260 (277)
247 cd06605 PKc_MAPKK Catalytic do 100.0 3.2E-40 6.9E-45 319.3 19.8 255 138-427 2-264 (265)
248 cd06618 PKc_MKK7 Catalytic dom 100.0 1.1E-39 2.4E-44 321.5 23.9 260 134-428 12-281 (296)
249 cd06620 PKc_MAPKK_Byr1_like Ca 100.0 4.5E-40 9.9E-45 322.2 21.0 256 137-426 5-272 (284)
250 cd06917 STKc_NAK1_like Catalyt 100.0 5E-40 1.1E-44 320.4 20.9 252 138-427 2-262 (277)
251 cd06647 STKc_PAK_I Catalytic d 100.0 5.5E-40 1.2E-44 323.4 20.9 254 136-428 18-277 (293)
252 cd06653 STKc_MEKK3_like_1 Cata 100.0 2.1E-39 4.5E-44 314.0 24.3 248 138-423 3-264 (264)
253 cd06633 STKc_TAO3 Catalytic do 100.0 2E-39 4.2E-44 322.5 24.6 249 139-427 23-280 (313)
254 cd05104 PTKc_Kit Catalytic dom 100.0 6.2E-40 1.3E-44 334.1 21.5 250 136-420 34-370 (375)
255 cd06640 STKc_MST4 Catalytic do 100.0 5.5E-40 1.2E-44 320.4 20.2 249 138-427 5-260 (277)
256 PHA03390 pk1 serine/threonine- 100.0 9.9E-40 2.1E-44 317.2 21.7 247 138-425 15-267 (267)
257 cd06648 STKc_PAK_II Catalytic 100.0 2E-39 4.4E-44 318.0 24.1 253 139-429 21-278 (285)
258 cd06623 PKc_MAPKK_plant_like C 100.0 2.1E-39 4.7E-44 313.0 23.6 251 138-427 2-263 (264)
259 cd08219 STKc_Nek3 Catalytic do 100.0 1.4E-39 3E-44 313.3 21.9 245 138-420 1-252 (255)
260 cd08215 STKc_Nek Catalytic dom 100.0 2.6E-39 5.5E-44 310.8 23.6 250 138-423 1-258 (258)
261 cd05064 PTKc_EphR_A10 Catalyti 100.0 7E-40 1.5E-44 317.8 19.8 245 137-419 5-260 (266)
262 cd06626 STKc_MEKK4 Catalytic d 100.0 3.2E-39 7E-44 312.0 24.1 251 138-423 1-264 (264)
263 cd08216 PK_STRAD Pseudokinase 100.0 1.2E-39 2.6E-44 323.9 20.9 277 139-429 4-304 (314)
264 cd05579 STKc_MAST_like Catalyt 100.0 2.2E-39 4.7E-44 312.8 22.1 243 145-426 1-263 (265)
265 cd06641 STKc_MST3 Catalytic do 100.0 1.7E-39 3.6E-44 317.0 21.3 250 139-428 6-261 (277)
266 cd05610 STKc_MASTL Catalytic d 100.0 2.5E-39 5.5E-44 351.3 24.9 141 137-288 4-152 (669)
267 cd06657 STKc_PAK4 Catalytic do 100.0 1.9E-39 4.1E-44 319.4 21.6 254 139-430 22-280 (292)
268 cd05061 PTKc_InsR Catalytic do 100.0 3.8E-39 8.2E-44 316.4 23.4 256 135-426 4-286 (288)
269 cd05054 PTKc_VEGFR Catalytic d 100.0 1.2E-39 2.5E-44 327.4 20.1 251 136-420 6-329 (337)
270 cd05052 PTKc_Abl Catalytic dom 100.0 4E-39 8.6E-44 311.9 23.0 245 137-419 6-257 (263)
271 cd05581 STKc_PDK1 Catalytic do 100.0 3.2E-39 6.9E-44 314.6 22.5 245 138-423 2-280 (280)
272 cd05613 STKc_MSK1_N N-terminal 100.0 3.1E-39 6.7E-44 317.2 22.4 255 138-428 1-276 (290)
273 cd08228 STKc_Nek6 Catalytic do 100.0 2.7E-39 5.9E-44 313.3 21.6 249 137-419 2-260 (267)
274 KOG0608 Warts/lats-like serine 100.0 2.3E-40 5E-45 330.9 14.0 252 138-427 630-935 (1034)
275 PRK13184 pknD serine/threonine 100.0 2.5E-39 5.4E-44 350.5 23.2 249 137-419 2-284 (932)
276 cd05048 PTKc_Ror Catalytic Dom 100.0 1.8E-39 3.9E-44 317.5 19.9 248 137-420 5-279 (283)
277 cd06635 STKc_TAO1 Catalytic do 100.0 4.4E-39 9.5E-44 320.5 22.9 248 139-426 27-283 (317)
278 PLN03225 Serine/threonine-prot 100.0 4.9E-39 1.1E-43 341.2 24.4 281 135-428 130-458 (566)
279 cd05122 PKc_STE Catalytic doma 100.0 1.1E-38 2.3E-43 305.1 24.2 248 138-422 1-253 (253)
280 cd05088 PTKc_Tie2 Catalytic do 100.0 3E-39 6.5E-44 319.6 20.8 250 135-420 5-276 (303)
281 cd05035 PTKc_Axl_like Catalyti 100.0 4.4E-39 9.5E-44 312.6 21.6 251 139-420 1-268 (273)
282 cd08222 STKc_Nek11 Catalytic d 100.0 4.8E-39 1E-43 310.5 21.5 249 138-423 1-260 (260)
283 cd06606 STKc_MAPKKK Catalytic 100.0 1.1E-38 2.4E-43 306.3 23.9 250 138-423 1-260 (260)
284 cd05062 PTKc_IGF-1R Catalytic 100.0 5.1E-39 1.1E-43 313.5 21.8 250 135-420 4-274 (277)
285 cd05084 PTKc_Fes Catalytic dom 100.0 3.2E-39 6.9E-44 310.3 20.1 238 143-419 1-248 (252)
286 cd05089 PTKc_Tie1 Catalytic do 100.0 4E-39 8.7E-44 317.7 21.3 247 138-420 3-271 (297)
287 cd05114 PTKc_Tec_Rlk Catalytic 100.0 7E-39 1.5E-43 308.8 22.3 243 137-419 4-253 (256)
288 cd06634 STKc_TAO2 Catalytic do 100.0 5.7E-39 1.2E-43 318.4 22.1 251 138-428 16-275 (308)
289 KOG1151 Tousled-like protein k 100.0 7.7E-41 1.7E-45 322.4 8.3 263 133-425 459-746 (775)
290 cd05075 PTKc_Axl Catalytic dom 100.0 4.9E-39 1.1E-43 312.4 21.1 250 140-420 2-267 (272)
291 cd05049 PTKc_Trk Catalytic dom 100.0 4.4E-39 9.6E-44 314.1 20.6 247 137-419 5-276 (280)
292 cd08530 STKc_CNK2-like Catalyt 100.0 1.3E-38 2.7E-43 306.2 23.4 249 138-423 1-256 (256)
293 cd05108 PTKc_EGFR Catalytic do 100.0 3.2E-39 7E-44 321.3 19.3 244 137-420 7-264 (316)
294 cd06627 STKc_Cdc7_like Catalyt 100.0 1.8E-38 4E-43 304.6 23.7 246 138-423 1-254 (254)
295 cd05090 PTKc_Ror1 Catalytic do 100.0 6.4E-39 1.4E-43 313.8 20.5 248 137-420 5-279 (283)
296 cd08229 STKc_Nek7 Catalytic do 100.0 8.5E-39 1.8E-43 309.9 21.2 250 137-419 2-260 (267)
297 KOG0695 Serine/threonine prote 100.0 4.8E-39 1E-43 300.5 18.4 258 132-428 245-524 (593)
298 cd05093 PTKc_TrkB Catalytic do 100.0 1.3E-38 2.9E-43 312.5 22.6 247 137-419 5-274 (288)
299 cd05113 PTKc_Btk_Bmx Catalytic 100.0 9.6E-39 2.1E-43 308.1 20.9 244 137-420 4-254 (256)
300 cd05091 PTKc_Ror2 Catalytic do 100.0 4.3E-39 9.4E-44 314.9 18.8 247 137-419 5-278 (283)
301 cd00192 PTKc Catalytic domain 100.0 1.8E-38 3.9E-43 305.6 22.8 242 143-420 1-260 (262)
302 cd05072 PTKc_Lyn Catalytic dom 100.0 1.2E-38 2.6E-43 307.9 21.4 245 136-419 5-256 (261)
303 cd05032 PTKc_InsR_like Catalyt 100.0 1.4E-38 3.1E-43 310.0 22.0 248 136-419 5-273 (277)
304 cd05105 PTKc_PDGFR_alpha Catal 100.0 1E-38 2.3E-43 326.7 22.0 249 136-419 36-392 (400)
305 cd05036 PTKc_ALK_LTK Catalytic 100.0 1.2E-38 2.6E-43 311.0 21.4 250 136-420 5-274 (277)
306 cd05123 STKc_AGC Catalytic dom 100.0 2.3E-38 4.9E-43 303.5 23.0 238 145-423 1-250 (250)
307 KOG1035 eIF-2alpha kinase GCN2 100.0 1.8E-39 4E-44 345.9 16.1 257 137-424 479-875 (1351)
308 cd06614 STKc_PAK Catalytic dom 100.0 1.6E-38 3.4E-43 311.5 21.2 254 137-427 19-277 (286)
309 KOG4250 TANK binding protein k 100.0 7.4E-40 1.6E-44 333.4 11.9 207 139-346 15-230 (732)
310 cd08224 STKc_Nek6_Nek7 Catalyt 100.0 3.9E-38 8.5E-43 304.9 23.4 250 137-419 2-260 (267)
311 cd05068 PTKc_Frk_like Catalyti 100.0 2.9E-38 6.3E-43 305.3 22.1 244 137-419 6-256 (261)
312 cd05059 PTKc_Tec_like Catalyti 100.0 1.5E-38 3.3E-43 306.5 19.6 243 138-420 5-254 (256)
313 cd05033 PTKc_EphR Catalytic do 100.0 2.2E-38 4.8E-43 307.1 20.5 245 137-420 4-261 (266)
314 PHA02882 putative serine/threo 100.0 4.2E-38 9E-43 310.1 22.6 253 138-419 13-291 (294)
315 KOG1187 Serine/threonine prote 100.0 1.1E-38 2.3E-43 319.8 18.4 262 136-419 74-347 (361)
316 cd05055 PTKc_PDGFR Catalytic d 100.0 5.1E-38 1.1E-42 310.7 22.7 249 134-419 32-296 (302)
317 cd05148 PTKc_Srm_Brk Catalytic 100.0 1.5E-38 3.2E-43 307.1 18.4 245 136-419 5-256 (261)
318 cd05583 STKc_MSK_N N-terminal 100.0 4.9E-38 1.1E-42 308.3 21.8 255 138-428 1-274 (288)
319 cd05094 PTKc_TrkC Catalytic do 100.0 4.6E-38 9.9E-43 309.2 21.6 247 137-419 5-277 (291)
320 cd05098 PTKc_FGFR1 Catalytic d 100.0 4.7E-38 1E-42 311.6 21.7 248 136-419 17-294 (307)
321 cd05103 PTKc_VEGFR2 Catalytic 100.0 3.7E-38 7.9E-43 317.4 21.1 250 137-420 7-335 (343)
322 cd05080 PTKc_Tyk2_rpt2 Catalyt 100.0 4.7E-38 1E-42 307.7 21.3 257 139-419 6-276 (283)
323 cd05051 PTKc_DDR Catalytic dom 100.0 5E-38 1.1E-42 309.3 21.5 254 137-419 5-292 (296)
324 cd05071 PTKc_Src Catalytic dom 100.0 6E-38 1.3E-42 303.6 21.8 243 137-419 6-255 (262)
325 cd05576 STKc_RPK118_like Catal 100.0 1.1E-38 2.3E-43 304.3 16.3 228 148-423 4-237 (237)
326 cd05053 PTKc_FGFR Catalytic do 100.0 4.4E-38 9.5E-43 309.4 21.0 249 136-420 11-287 (293)
327 cd05116 PTKc_Syk Catalytic dom 100.0 6.2E-38 1.3E-42 302.4 21.6 235 144-419 2-250 (257)
328 cd05082 PTKc_Csk Catalytic dom 100.0 7.6E-38 1.6E-42 301.5 21.9 242 137-419 6-251 (256)
329 cd05109 PTKc_HER2 Catalytic do 100.0 5E-38 1.1E-42 306.8 20.8 243 137-419 7-263 (279)
330 cd05045 PTKc_RET Catalytic dom 100.0 5.3E-38 1.1E-42 308.5 20.8 246 138-419 1-281 (290)
331 cd05066 PTKc_EphR_A Catalytic 100.0 4.6E-38 9.9E-43 305.1 20.0 244 137-419 4-261 (267)
332 cd05097 PTKc_DDR_like Catalyti 100.0 5.9E-38 1.3E-42 309.0 20.9 254 137-419 5-291 (295)
333 cd05063 PTKc_EphR_A2 Catalytic 100.0 6.9E-38 1.5E-42 303.8 20.9 245 137-419 5-262 (268)
334 cd05092 PTKc_TrkA Catalytic do 100.0 7.5E-38 1.6E-42 305.9 20.9 246 138-419 6-276 (280)
335 cd05070 PTKc_Fyn_Yrk Catalytic 100.0 1.1E-37 2.3E-42 301.2 21.6 243 137-419 6-255 (260)
336 cd05034 PTKc_Src_like Catalyti 100.0 1.3E-37 2.8E-42 300.5 22.1 245 136-419 5-256 (261)
337 cd05065 PTKc_EphR_B Catalytic 100.0 1E-37 2.2E-42 302.9 21.3 244 138-419 5-263 (269)
338 cd05099 PTKc_FGFR4 Catalytic d 100.0 1.5E-37 3.3E-42 309.0 23.0 249 135-419 10-288 (314)
339 cd05047 PTKc_Tie Catalytic dom 100.0 9E-38 2E-42 303.6 20.8 240 144-419 2-263 (270)
340 cd05107 PTKc_PDGFR_beta Cataly 100.0 1.3E-37 2.8E-42 318.6 22.8 252 134-420 34-395 (401)
341 cd05101 PTKc_FGFR2 Catalytic d 100.0 1.4E-37 3E-42 307.8 22.3 250 135-420 13-292 (304)
342 cd05077 PTK_Jak1_rpt1 Pseudoki 100.0 7E-38 1.5E-42 303.2 19.6 236 144-420 2-260 (262)
343 cd05069 PTKc_Yes Catalytic dom 100.0 2.1E-37 4.7E-42 299.2 22.9 243 137-419 6-255 (260)
344 cd05039 PTKc_Csk_like Catalyti 100.0 1.9E-37 4.2E-42 298.6 22.5 241 137-419 6-251 (256)
345 KOG1006 Mitogen-activated prot 100.0 9.1E-40 2E-44 297.0 5.9 262 139-429 66-336 (361)
346 cd05115 PTKc_Zap-70 Catalytic 100.0 1.2E-37 2.7E-42 300.6 21.1 237 144-419 2-250 (257)
347 cd05100 PTKc_FGFR3 Catalytic d 100.0 1.4E-37 3.1E-42 311.9 22.4 249 136-420 11-289 (334)
348 cd05067 PTKc_Lck_Blk Catalytic 100.0 1.5E-37 3.2E-42 300.2 21.5 243 137-419 6-255 (260)
349 cd05050 PTKc_Musk Catalytic do 100.0 1E-37 2.2E-42 306.1 20.5 248 136-419 4-284 (288)
350 cd05040 PTKc_Ack_like Catalyti 100.0 2.1E-37 4.5E-42 298.4 22.2 239 143-419 1-253 (257)
351 cd05078 PTK_Jak2_Jak3_rpt1 Pse 100.0 3.1E-38 6.8E-43 304.8 16.4 236 144-420 2-256 (258)
352 cd05111 PTK_HER3 Pseudokinase 100.0 1.1E-37 2.5E-42 304.6 20.4 243 137-419 7-263 (279)
353 cd05042 PTKc_Aatyk Catalytic d 100.0 2E-37 4.2E-42 300.9 21.7 245 144-419 2-265 (269)
354 cd05081 PTKc_Jak2_Jak3_rpt2 Ca 100.0 1.4E-37 3E-42 304.4 20.7 256 138-419 5-278 (284)
355 cd05112 PTKc_Itk Catalytic dom 100.0 2.8E-37 6.1E-42 297.3 22.3 244 138-420 5-254 (256)
356 cd05076 PTK_Tyk2_rpt1 Pseudoki 100.0 1.1E-37 2.3E-42 304.0 19.4 236 144-420 2-272 (274)
357 cd05046 PTK_CCK4 Pseudokinase 100.0 2.7E-37 5.9E-42 300.8 22.0 249 137-420 5-272 (275)
358 cd08528 STKc_Nek10 Catalytic d 100.0 2.3E-37 4.9E-42 300.3 21.2 249 138-420 1-266 (269)
359 cd05060 PTKc_Syk_like Catalyti 100.0 2.5E-37 5.4E-42 298.1 21.4 236 143-419 1-250 (257)
360 cd05043 PTK_Ryk Pseudokinase d 100.0 2E-37 4.3E-42 302.7 20.9 248 137-419 6-271 (280)
361 smart00219 TyrKc Tyrosine kina 100.0 3.1E-37 6.7E-42 296.7 21.5 242 140-419 2-256 (258)
362 cd05095 PTKc_DDR2 Catalytic do 100.0 3.3E-37 7.1E-42 303.9 22.1 254 137-419 5-292 (296)
363 KOG0587 Traf2- and Nck-interac 100.0 8.9E-38 1.9E-42 323.8 18.6 265 133-427 15-289 (953)
364 cd05085 PTKc_Fer Catalytic dom 100.0 3.3E-37 7.1E-42 295.8 21.3 236 144-419 2-246 (250)
365 cd05087 PTKc_Aatyk1_Aatyk3 Cat 100.0 4.4E-37 9.6E-42 298.5 22.2 246 143-419 1-265 (269)
366 cd05041 PTKc_Fes_like Catalyti 100.0 2.8E-37 6.1E-42 296.4 20.1 237 143-419 1-247 (251)
367 cd05057 PTKc_EGFR_like Catalyt 100.0 3.7E-37 8.1E-42 300.7 20.9 243 137-419 7-263 (279)
368 cd05079 PTKc_Jak1_rpt2 Catalyt 100.0 2.6E-37 5.5E-42 302.7 19.7 254 139-419 6-278 (284)
369 cd05056 PTKc_FAK Catalytic dom 100.0 8.9E-37 1.9E-41 296.5 22.2 243 137-419 6-260 (270)
370 PF07714 Pkinase_Tyr: Protein 100.0 2E-37 4.3E-42 299.6 17.4 242 140-419 2-257 (259)
371 KOG0194 Protein tyrosine kinas 100.0 8.3E-38 1.8E-42 315.7 14.7 246 137-419 157-415 (474)
372 cd05073 PTKc_Hck Catalytic dom 100.0 1.3E-36 2.8E-41 293.7 22.6 243 137-419 6-255 (260)
373 cd05058 PTKc_Met_Ron Catalytic 100.0 5.1E-37 1.1E-41 296.6 19.4 239 143-419 1-254 (262)
374 cd05083 PTKc_Chk Catalytic dom 100.0 6.6E-37 1.4E-41 294.6 20.1 240 137-419 6-249 (254)
375 KOG1026 Nerve growth factor re 100.0 9.5E-38 2.1E-42 325.1 14.4 245 138-418 487-756 (774)
376 cd05110 PTKc_HER4 Catalytic do 100.0 6.3E-37 1.4E-41 303.0 19.6 244 137-420 7-264 (303)
377 cd05044 PTKc_c-ros Catalytic d 100.0 7.8E-37 1.7E-41 296.4 19.8 242 143-419 1-265 (269)
378 cd05086 PTKc_Aatyk2 Catalytic 100.0 2E-36 4.4E-41 293.9 22.6 245 144-419 2-264 (268)
379 cd05074 PTKc_Tyro3 Catalytic d 100.0 1.1E-36 2.3E-41 296.1 20.2 250 139-419 1-267 (273)
380 cd05037 PTK_Jak_rpt1 Pseudokin 100.0 1.1E-36 2.3E-41 293.5 18.9 235 143-419 1-256 (259)
381 PLN03224 probable serine/threo 100.0 6.6E-36 1.4E-40 310.0 22.8 274 134-425 142-505 (507)
382 KOG1095 Protein tyrosine kinas 100.0 1.2E-36 2.7E-41 327.4 17.5 246 138-419 693-956 (1025)
383 cd05038 PTKc_Jak_rpt2 Catalyti 100.0 8.4E-36 1.8E-40 291.2 19.6 259 138-419 5-278 (284)
384 KOG1167 Serine/threonine prote 100.0 9.2E-37 2E-41 294.5 11.0 281 135-427 34-388 (418)
385 KOG1027 Serine/threonine prote 100.0 1.9E-36 4.1E-41 312.6 12.5 252 138-426 510-773 (903)
386 KOG4257 Focal adhesion tyrosin 100.0 3.5E-36 7.5E-41 300.7 13.3 240 139-418 391-643 (974)
387 KOG1094 Discoidin domain recep 100.0 4.5E-35 9.7E-40 291.2 20.3 250 138-419 539-799 (807)
388 KOG0199 ACK and related non-re 100.0 5E-36 1.1E-40 303.0 13.6 249 138-425 111-373 (1039)
389 smart00220 S_TKc Serine/Threon 100.0 2.5E-34 5.3E-39 272.9 22.1 238 149-423 1-244 (244)
390 KOG0196 Tyrosine kinase, EPH ( 100.0 4.1E-36 9E-41 307.3 8.2 244 138-419 630-886 (996)
391 KOG4278 Protein tyrosine kinas 100.0 6.5E-35 1.4E-39 291.2 15.3 242 138-418 268-517 (1157)
392 KOG0984 Mitogen-activated prot 100.0 8.4E-35 1.8E-39 255.8 12.3 211 138-354 47-267 (282)
393 PLN00113 leucine-rich repeat r 100.0 4.2E-34 9.1E-39 325.3 18.5 252 138-420 691-947 (968)
394 KOG1152 Signal transduction se 100.0 3.2E-34 6.9E-39 284.9 11.9 202 131-342 555-771 (772)
395 KOG2052 Activin A type IB rece 100.0 7.8E-33 1.7E-37 268.2 17.3 269 125-419 194-498 (513)
396 KOG0576 Mitogen-activated prot 100.0 4.3E-34 9.2E-39 288.3 6.4 255 137-425 15-276 (829)
397 KOG3653 Transforming growth fa 100.0 1.5E-32 3.3E-37 268.0 13.2 268 139-422 212-507 (534)
398 KOG0200 Fibroblast/platelet-de 100.0 1.5E-30 3.3E-35 278.8 20.8 246 139-419 298-574 (609)
399 KOG1025 Epidermal growth facto 100.0 5.4E-31 1.2E-35 270.8 13.7 241 139-419 698-952 (1177)
400 cd00180 PKc Catalytic domain o 100.0 3.8E-29 8.3E-34 231.2 19.9 207 145-421 1-215 (215)
401 PLN00181 protein SPA1-RELATED; 100.0 7.6E-31 1.6E-35 291.5 10.0 207 186-427 28-272 (793)
402 KOG1345 Serine/threonine kinas 100.0 6.5E-31 1.4E-35 240.0 6.1 256 137-425 24-292 (378)
403 smart00221 STYKc Protein kinas 100.0 1E-28 2.2E-33 232.1 20.8 203 139-351 1-212 (225)
404 KOG0590 Checkpoint kinase and 99.9 5.6E-29 1.2E-33 263.7 5.6 258 140-428 321-593 (601)
405 smart00750 KIND kinase non-cat 99.9 2.3E-27 5E-32 215.3 10.1 157 232-425 11-170 (176)
406 KOG1024 Receptor-like protein 99.9 4.9E-27 1.1E-31 224.3 12.4 248 137-419 284-550 (563)
407 KOG1165 Casein kinase (serine/ 99.9 4.3E-26 9.3E-31 214.0 17.3 219 136-364 27-263 (449)
408 KOG1163 Casein kinase (serine/ 99.9 3.4E-26 7.4E-31 206.0 16.0 201 137-347 15-228 (341)
409 KOG1164 Casein kinase (serine/ 99.9 2.3E-25 5E-30 222.0 21.9 251 138-420 19-293 (322)
410 KOG0606 Microtubule-associated 99.9 8.1E-27 1.8E-31 247.1 8.3 224 135-428 81-323 (1205)
411 PRK09188 serine/threonine prot 99.9 5.6E-26 1.2E-30 226.6 13.8 157 135-312 16-193 (365)
412 COG0515 SPS1 Serine/threonine 99.9 1.7E-24 3.7E-29 213.2 23.6 262 139-428 2-283 (384)
413 KOG0603 Ribosomal protein S6 k 99.9 3.4E-26 7.3E-31 232.0 2.7 236 144-428 1-251 (612)
414 PF14531 Kinase-like: Kinase-l 99.9 1.4E-23 3E-28 201.0 13.3 237 138-411 13-288 (288)
415 KOG4158 BRPK/PTEN-induced prot 99.9 3.2E-23 6.9E-28 198.9 11.1 195 188-415 274-505 (598)
416 cd05147 RIO1_euk RIO kinase fa 99.9 1.3E-22 2.8E-27 186.2 10.7 135 142-290 2-167 (190)
417 PRK12274 serine/threonine prot 99.9 4.7E-22 1E-26 181.2 13.7 182 140-344 5-211 (218)
418 PRK10359 lipopolysaccharide co 99.9 4E-22 8.7E-27 185.5 11.9 170 137-334 31-216 (232)
419 KOG1240 Protein kinase contain 99.9 1.2E-22 2.6E-27 215.7 7.8 241 138-420 24-291 (1431)
420 cd05145 RIO1_like RIO kinase f 99.9 3.3E-21 7.1E-26 177.3 13.7 136 142-290 2-167 (190)
421 PRK10345 hypothetical protein; 99.8 1.6E-19 3.5E-24 167.4 14.6 133 142-287 7-156 (210)
422 KOG1033 eIF-2alpha kinase PEK/ 99.8 1.4E-20 3E-25 188.0 7.2 181 207-424 328-516 (516)
423 KOG1166 Mitotic checkpoint ser 99.8 2.3E-19 5.1E-24 194.4 14.1 190 136-337 697-900 (974)
424 smart00090 RIO RIO-like kinase 99.8 2.1E-19 4.5E-24 170.6 11.5 140 138-290 29-198 (237)
425 KOG0590 Checkpoint kinase and 99.8 3.2E-20 6.9E-25 197.1 1.2 256 138-425 21-291 (601)
426 cd05144 RIO2_C RIO kinase fami 99.7 6.9E-18 1.5E-22 156.3 11.8 131 139-290 17-175 (198)
427 PRK14879 serine/threonine prot 99.7 2.5E-17 5.5E-22 153.9 12.8 130 143-289 2-143 (211)
428 KOG0195 Integrin-linked kinase 99.7 6.9E-18 1.5E-22 155.0 7.7 239 139-418 192-440 (448)
429 TIGR03724 arch_bud32 Kae1-asso 99.7 5.9E-17 1.3E-21 150.0 12.4 127 144-290 1-139 (199)
430 KOG1023 Natriuretic peptide re 99.7 4.3E-17 9.3E-22 166.0 9.9 206 184-419 1-219 (484)
431 PRK09605 bifunctional UGMP fam 99.7 1.4E-16 3.1E-21 169.4 12.6 132 138-290 334-477 (535)
432 cd05119 RIO RIO kinase family, 99.7 2.7E-16 5.8E-21 144.1 11.4 131 142-290 2-164 (187)
433 cd05120 APH_ChoK_like Aminogly 99.6 9.3E-16 2E-20 134.4 9.8 130 142-289 3-138 (155)
434 PRK01723 3-deoxy-D-manno-octul 99.6 6.2E-15 1.3E-19 140.2 14.5 133 143-289 37-191 (239)
435 KOG0606 Microtubule-associated 99.6 1.3E-15 2.8E-20 162.7 4.4 269 136-442 803-1114(1205)
436 KOG0601 Cyclin-dependent kinas 99.6 6.6E-15 1.4E-19 150.2 9.0 247 138-425 115-384 (524)
437 KOG1266 Protein kinase [Signal 99.4 3.6E-13 7.8E-18 127.4 9.5 242 152-428 81-339 (458)
438 PRK04750 ubiB putative ubiquin 99.4 2.2E-13 4.9E-18 142.3 8.2 142 138-292 121-316 (537)
439 TIGR01982 UbiB 2-polyprenylphe 99.4 1.7E-12 3.6E-17 134.2 11.8 137 143-291 123-308 (437)
440 KOG1243 Protein kinase [Genera 99.4 3.6E-12 7.7E-17 131.6 12.9 180 139-336 15-199 (690)
441 cd05151 ChoK Choline Kinase (C 99.4 3.6E-12 7.7E-17 114.6 9.9 123 143-288 4-135 (170)
442 cd05146 RIO3_euk RIO kinase fa 99.3 6E-12 1.3E-16 114.9 9.8 133 143-290 3-174 (197)
443 KOG0601 Cyclin-dependent kinas 99.3 1.5E-12 3.2E-17 133.1 5.5 248 136-426 264-520 (524)
444 KOG3741 Poly(A) ribonuclease s 99.2 3.8E-10 8.3E-15 113.3 15.2 213 150-419 289-520 (655)
445 KOG2137 Protein kinase [Signal 99.2 1.3E-11 2.9E-16 127.9 3.7 155 246-427 107-272 (700)
446 KOG3087 Serine/threonine prote 99.1 1.2E-09 2.5E-14 96.3 12.2 139 142-290 12-166 (229)
447 COG4248 Uncharacterized protei 99.0 4.7E-09 1E-13 103.1 15.1 256 141-415 15-291 (637)
448 COG3642 Mn2+-dependent serine/ 99.0 2.8E-09 6E-14 94.4 11.9 127 143-289 2-140 (204)
449 cd05154 ACAD10_11_like Acyl-Co 99.0 2.3E-09 5.1E-14 100.5 11.7 140 143-289 4-206 (223)
450 PF01163 RIO1: RIO1 family; I 99.0 2E-09 4.2E-14 98.0 9.3 121 152-290 1-156 (188)
451 PRK15123 lipopolysaccharide co 98.9 3.5E-08 7.5E-13 95.2 15.4 133 152-289 37-194 (268)
452 COG0478 RIO-like serine/threon 98.9 9.8E-09 2.1E-13 96.2 9.5 132 138-289 92-251 (304)
453 KOG0576 Mitogen-activated prot 98.8 1.6E-09 3.5E-14 111.3 1.3 248 138-428 243-492 (829)
454 PF06293 Kdo: Lipopolysacchari 98.6 8.8E-07 1.9E-11 82.4 12.5 108 177-290 58-171 (206)
455 PRK09902 hypothetical protein; 98.5 3.1E-06 6.7E-11 77.7 14.6 139 145-289 26-179 (216)
456 COG0661 AarF Predicted unusual 98.5 3.1E-07 6.6E-12 95.9 8.2 134 143-292 131-317 (517)
457 PF06176 WaaY: Lipopolysacchar 98.5 3.4E-06 7.4E-11 77.7 13.7 135 138-288 32-182 (229)
458 COG1718 RIO1 Serine/threonine 98.5 1.9E-06 4.1E-11 80.3 12.0 132 144-290 55-216 (268)
459 KOG1035 eIF-2alpha kinase GCN2 98.4 1.6E-06 3.4E-11 95.5 11.4 205 177-427 229-441 (1351)
460 PF01636 APH: Phosphotransfera 98.3 6.1E-06 1.3E-10 77.7 12.0 75 142-220 2-80 (239)
461 KOG1235 Predicted unusual prot 98.3 4.9E-06 1.1E-10 86.7 10.4 139 143-291 167-356 (538)
462 TIGR02172 Fb_sc_TIGR02172 Fibr 98.2 2.4E-05 5.1E-10 73.8 11.9 69 143-220 7-79 (226)
463 PLN02876 acyl-CoA dehydrogenas 98.0 6.9E-05 1.5E-09 84.1 14.5 77 142-220 43-129 (822)
464 PF13095 FTA2: Kinetochore Sim 98.0 4.4E-05 9.6E-10 69.6 10.3 126 137-287 37-206 (207)
465 COG2112 Predicted Ser/Thr prot 98.0 4E-05 8.7E-10 67.8 9.2 126 140-289 25-155 (201)
466 cd05150 APH Aminoglycoside 3'- 97.9 0.0001 2.2E-09 70.4 11.4 66 149-221 11-78 (244)
467 PF10707 YrbL-PhoP_reg: PhoP r 97.7 0.00066 1.4E-08 62.4 12.2 131 143-287 7-170 (199)
468 cd05155 APH_ChoK_like_1 Unchar 97.6 0.0004 8.7E-09 65.9 10.9 30 258-288 164-193 (235)
469 PRK09550 mtnK methylthioribose 97.6 0.00092 2E-08 68.1 12.5 70 143-219 32-115 (401)
470 KOG2268 Serine/threonine prote 97.5 9.8E-05 2.1E-09 71.4 4.9 129 138-287 93-249 (465)
471 KOG1826 Ras GTPase activating 97.5 3.5E-05 7.5E-10 87.1 2.0 216 179-427 1278-1499(2724)
472 cd05157 ETNK_euk Ethanolamine 97.5 0.0013 2.8E-08 62.2 12.5 68 143-219 4-76 (235)
473 TIGR02721 ycfN_thiK thiamine k 97.5 0.00045 9.7E-09 66.5 8.9 132 145-289 4-175 (256)
474 PRK10593 hypothetical protein; 97.4 0.002 4.3E-08 63.4 12.6 75 142-220 19-98 (297)
475 KOG2270 Serine/threonine prote 97.4 0.0013 2.8E-08 64.8 10.6 136 141-289 148-313 (520)
476 PF12260 PIP49_C: Protein-kina 97.4 0.00049 1.1E-08 62.9 7.0 102 178-290 7-112 (188)
477 cd05153 HomoserineK_II Homoser 97.3 0.00093 2E-08 65.7 8.8 143 143-288 20-204 (296)
478 TIGR00938 thrB_alt homoserine 97.2 0.0036 7.8E-08 61.9 12.1 144 142-288 27-216 (307)
479 PRK05231 homoserine kinase; Pr 97.1 0.0072 1.6E-07 60.1 13.2 30 258-288 187-216 (319)
480 KOG1093 Predicted protein kina 97.0 0.00084 1.8E-08 68.7 5.3 171 179-427 31-201 (725)
481 TIGR01767 MTRK 5-methylthiorib 96.9 0.0099 2.2E-07 59.4 11.8 69 144-219 2-84 (370)
482 PRK12396 5-methylribose kinase 96.7 0.012 2.6E-07 59.6 10.8 71 142-219 34-117 (409)
483 PLN02236 choline kinase 96.7 0.011 2.5E-07 59.4 10.4 31 259-289 201-231 (344)
484 COG3173 Predicted aminoglycosi 96.7 0.019 4E-07 56.6 11.4 31 259-290 199-229 (321)
485 cd05156 ChoK_euk Choline Kinas 96.7 0.02 4.4E-07 56.3 11.9 31 258-288 179-212 (302)
486 PLN02421 phosphotransferase, a 96.6 0.022 4.8E-07 57.0 11.4 30 260-289 184-213 (330)
487 TIGR02906 spore_CotS spore coa 96.6 0.034 7.4E-07 54.9 12.8 29 258-288 187-215 (313)
488 cd05152 MPH2' Macrolide 2'-Pho 96.4 0.018 4E-07 56.0 9.5 31 259-289 186-216 (276)
489 PLN02756 S-methyl-5-thioribose 96.2 0.069 1.5E-06 54.5 12.3 69 142-219 37-119 (418)
490 TIGR02904 spore_ysxE spore coa 96.1 0.055 1.2E-06 53.6 11.5 31 258-289 196-226 (309)
491 COG5072 ALK1 Serine/threonine 95.8 0.031 6.7E-07 55.4 7.6 75 205-289 296-370 (488)
492 PF03881 Fructosamin_kin: Fruc 95.1 0.12 2.5E-06 50.6 9.2 72 142-220 22-97 (288)
493 PTZ00384 choline kinase; Provi 94.9 0.38 8.1E-06 49.1 12.4 29 258-288 227-255 (383)
494 PF07387 Seadorna_VP7: Seadorn 93.6 0.24 5.2E-06 45.9 7.0 86 176-287 104-190 (308)
495 PRK11768 serine/threonine prot 93.6 1.2 2.5E-05 44.5 12.7 28 258-288 196-223 (325)
496 KOG1236 Predicted unusual prot 93.1 0.23 5.1E-06 50.1 6.6 61 211-276 321-382 (565)
497 PRK10271 thiK thiamine kinase; 92.1 0.12 2.6E-06 46.9 2.9 29 259-289 78-106 (188)
498 PF01633 Choline_kinase: Choli 91.3 0.2 4.3E-06 46.5 3.5 30 258-288 143-173 (211)
499 KOG2269 Serine/threonine prote 91.1 0.27 5.9E-06 48.1 4.3 131 141-288 256-431 (531)
500 smart00587 CHK ZnF_C4 abd HLH 91.1 0.45 9.8E-06 43.6 5.7 32 258-289 120-155 (196)
No 1
>KOG0658 consensus Glycogen synthase kinase-3 [Carbohydrate transport and metabolism]
Probab=100.00 E-value=2.7e-75 Score=552.97 Aligned_cols=346 Identities=74% Similarity=1.194 Sum_probs=329.4
Q ss_pred eeeeecCCCCCCCccccceeEeeeeccCCceEEEEEEEcCCCCEEEEEEeccchhhHHHHHHHHHHcCCCCccccceeee
Q 011138 121 VIATTVGGRNGQPKQTISYMAERVVGTGSFGVVFQAKCLETGDSVAIKKVLQDKRYKNRELQIMRLLNHPNVVSLKHCFF 200 (492)
Q Consensus 121 ~~~~~~~~~~~~~~~~~~y~~~~~lG~G~fg~Vy~~~~~~~g~~vAiK~~~~~~~~~~~E~~il~~l~h~nIv~l~~~~~ 200 (492)
...+...+.....+....|...+++|.|+||.||+|+...+++.||||++..+.+...+|+.||+.++|||||+|..+|.
T Consensus 8 ~~~~~~~~~~~~~~~~i~~~~~~liG~GsFg~Vyq~~~~e~~~~vAIKKv~~d~r~knrEl~im~~l~HpNIV~L~~~f~ 87 (364)
T KOG0658|consen 8 VIQTVAEGRNDGKKVEISYEAVRLIGSGSFGVVYQAKLRETEEEVAIKKVLQDKRYKNRELQIMRKLDHPNIVRLLYFFS 87 (364)
T ss_pred EEEEEeecCCCCcceEEEEEeeEEEeecccceEEEEEEcCCCceeEEEEecCCCCcCcHHHHHHHhcCCcCeeeEEEEEE
Confidence 34445556666777888999999999999999999999999999999999999999999999999999999999999998
Q ss_pred eccCCCceEEEEEeeechhhHHHHhhhhhhcCCCcCHHHHHHHHHHHHHHHHHHHhhCCcccCCCCCCceEEcCCCCcEE
Q 011138 201 STTEKDELYLNLVLEYISETVYRVSKHYTRMNQHVPILYVQLYTYQICRALNYLHHVVGVCHRDIKPQNLLVNPHTHQLK 280 (492)
Q Consensus 201 ~~~~~~~~~~~lV~E~~~~~l~~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~yLH~~~givHrDlKp~NILl~~~~~~vk 280 (492)
...+.+..++.+||||++.++++.++++...+..++...++.|++||++||.|||+ .||+||||||+|+|+|.+.+.+|
T Consensus 88 ~~~~~d~~~lnlVleymP~tL~~~~r~~~~~~~~mp~~~iKLYt~Qlfrgl~yLh~-~~IcHRDIKPqNlLvD~~tg~LK 166 (364)
T KOG0658|consen 88 SSTESDEVYLNLVLEYMPETLYRVIRHYTRANQRMPLLEIKLYTYQLFRGLAYLHS-HGICHRDIKPQNLLVDPDTGVLK 166 (364)
T ss_pred ecCCCchhHHHHHHHhchHHHHHHHHHHhhcCCCCceeeeHHHHHHHHHHHHHHHh-cCcccCCCChheEEEcCCCCeEE
Confidence 88877788999999999999999999999999999999999999999999999997 99999999999999999988999
Q ss_pred EeeecCccccCCCCCCccceeccCccCchhhcCCCCCCcchhhHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCC
Q 011138 281 ICDFGSAKMLVPGEPNISYICSRYYRAPELIFGATEYTTAIDMWSIGCVLAELLLGQPLFPGESGVDQLVEIIKILGTPT 360 (492)
Q Consensus 281 L~DFG~a~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DvwSlGvil~ell~G~~pf~~~~~~~~~~~i~~~~g~p~ 360 (492)
|||||.|+.+..+++..++++|++|+|||++.|...|+.++||||.||++.||+-|++.|+|.+..+|+..|++++|.|+
T Consensus 167 icDFGSAK~L~~~epniSYicSRyYRaPELifga~~Yt~~IDiWSaGCV~aELl~g~plFpG~s~~dQL~eIik~lG~Pt 246 (364)
T KOG0658|consen 167 ICDFGSAKVLVKGEPNISYICSRYYRAPELIFGATEYTTSIDIWSAGCVMAELLKGQPLFPGDSSVDQLVEIIKVLGTPT 246 (364)
T ss_pred eccCCcceeeccCCCceeEEEeccccCHHHHcCccccCceeEEhhhhHHHHHHhcCCcccCCCCHHHHHHHHHHHhCCCC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHhhcCCCCcccCCCcccCCCcccccCCCCChhHhhhhccccccCCCCcCCHHHhhCCCCCCCCCCCCCCCCCCCCCC
Q 011138 361 REEIKCMNPNYTEFKFPQIKAHPWHKIFHKRMPPEALDLVSRLLQYSPSLRCTALEACAHPFFDDLRDPNTCLPNGRPLP 440 (492)
Q Consensus 361 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~Li~~~L~~dP~~R~t~~e~l~Hp~f~~~~~~~~~~~~~~~~~ 440 (492)
.+++.+|++++.+.++|+++..+|...+.+.+++++.+|+.++|+++|.+|.++.|+|.||||+.+++++..++++.++|
T Consensus 247 ~e~I~~mn~~y~~~~~p~ik~~~~~~~~~~~~~~d~~dll~~~L~Y~P~~R~~~~~~l~h~fFdelr~~~~~l~~g~~lp 326 (364)
T KOG0658|consen 247 REDIKSMNPNYTEFKFPQIKAHPWHKVFFKRLPPDALDLLSKLLQYSPSKRLSALEALAHPFFDELRDPNTKLPNGRPLP 326 (364)
T ss_pred HHHHhhcCcccccccCcccccccceeecccCCCHHHHHHHHHHhccChhhcCCHHHHhcchhhHHhhCcCccCcCCCcCC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCCcccccccccccccccccccCccchhHHHhcCCHHHHhhcccccccC
Q 011138 441 TLFNFTAQGKLILCFSYFGFSSYFLPHANCLAELAGASNELRQRLIPEHARK 492 (492)
Q Consensus 441 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 492 (492)
++++|+.. | .+..+|++..++|+|.|+
T Consensus 327 ~lf~f~~~------------------------e-~~~~~~~~~~l~p~~~~~ 353 (364)
T KOG0658|consen 327 PLFNFKRA------------------------E-LGISPELVNVLIPEHLRE 353 (364)
T ss_pred CccCchHH------------------------H-hccchHHHHhhccHhhhh
Confidence 99999965 3 388999999999999874
No 2
>KOG0593 consensus Predicted protein kinase KKIAMRE [General function prediction only]
Probab=100.00 E-value=1.6e-60 Score=439.40 Aligned_cols=279 Identities=37% Similarity=0.684 Sum_probs=249.8
Q ss_pred ceeEeeeeccCCceEEEEEEEcCCCCEEEEEEeccchh------hHHHHHHHHHHcCCCCccccceeeeeccCCCceEEE
Q 011138 138 SYMAERVVGTGSFGVVFQAKCLETGDSVAIKKVLQDKR------YKNRELQIMRLLNHPNVVSLKHCFFSTTEKDELYLN 211 (492)
Q Consensus 138 ~y~~~~~lG~G~fg~Vy~~~~~~~g~~vAiK~~~~~~~------~~~~E~~il~~l~h~nIv~l~~~~~~~~~~~~~~~~ 211 (492)
.|+...++|+|+||+||+|+++.||+.||||++...+. ...||+++|++|+|+|+|.|+++| .....++
T Consensus 3 kYE~LgkvGEGSYGvV~KCrnk~TgqIVAIKkF~Esedd~~VkKIAlREIrmLKqLkH~NLVnLiEVF-----rrkrklh 77 (396)
T KOG0593|consen 3 KYEKLGKVGEGSYGVVMKCRNKDTGQIVAIKKFVESEDDPVVKKIALREIRMLKQLKHENLVNLIEVF-----RRKRKLH 77 (396)
T ss_pred HHhhhhccccCcceEEEEeccCCcccEEEEEeeccCCccHHHHHHHHHHHHHHHhcccchHHHHHHHH-----HhcceeE
Confidence 58888899999999999999999999999999965433 345899999999999999999999 7777799
Q ss_pred EEeeechhhHHHHhhhhhhcCCCcCHHHHHHHHHHHHHHHHHHHhhCCcccCCCCCCceEEcCCCCcEEEeeecCccccC
Q 011138 212 LVLEYISETVYRVSKHYTRMNQHVPILYVQLYTYQICRALNYLHHVVGVCHRDIKPQNLLVNPHTHQLKICDFGSAKMLV 291 (492)
Q Consensus 212 lV~E~~~~~l~~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~yLH~~~givHrDlKp~NILl~~~~~~vkL~DFG~a~~~~ 291 (492)
||+|||+.++++.+.+ ....++...++.|++|++.|+.|+|+ +++||||||||||||+.++ .+||||||+|+.+.
T Consensus 78 LVFE~~dhTvL~eLe~---~p~G~~~~~vk~~l~Q~l~ai~~cHk-~n~IHRDIKPENILit~~g-vvKLCDFGFAR~L~ 152 (396)
T KOG0593|consen 78 LVFEYCDHTVLHELER---YPNGVPSELVKKYLYQLLKAIHFCHK-NNCIHRDIKPENILITQNG-VVKLCDFGFARTLS 152 (396)
T ss_pred EEeeecchHHHHHHHh---ccCCCCHHHHHHHHHHHHHHhhhhhh-cCeecccCChhheEEecCC-cEEeccchhhHhhc
Confidence 9999999988876554 45679999999999999999999997 9999999999999999988 89999999999987
Q ss_pred -CCCCCccceeccCccCchhhcCCCCCCcchhhHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCCHHHHh--hcC
Q 011138 292 -PGEPNISYICSRYYRAPELIFGATEYTTAIDMWSIGCVLAELLLGQPLFPGESGVDQLVEIIKILGTPTREEIK--CMN 368 (492)
Q Consensus 292 -~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DvwSlGvil~ell~G~~pf~~~~~~~~~~~i~~~~g~p~~~~~~--~~~ 368 (492)
+++..+.++.|++|+|||++.|...|+..+||||+||++.||++|.+.|+|.++.+++..|.+.+|.-.+.... ..+
T Consensus 153 ~pgd~YTDYVATRWYRaPELLvGDtqYG~pVDiWAiGCv~aEl~~G~pL~PG~SDiDQLy~I~ktLG~L~prhq~iF~~N 232 (396)
T KOG0593|consen 153 APGDNYTDYVATRWYRAPELLVGDTQYGKPVDIWAIGCVFAELLTGEPLWPGRSDIDQLYLIRKTLGNLIPRHQSIFSSN 232 (396)
T ss_pred CCcchhhhhhhhhhccChhhhcccCcCCCcccchhhhHHHHHHhcCCcCCCCcchHHHHHHHHHHHcccCHHHHHHhccC
Confidence 77778889999999999999998899999999999999999999999999999999999999999987776554 557
Q ss_pred CCCcccCCCcccCCC-cccccCCCCChhHhhhhccccccCCCCcCCHHHhhCCCCCCCCC
Q 011138 369 PNYTEFKFPQIKAHP-WHKIFHKRMPPEALDLVSRLLQYSPSLRCTALEACAHPFFDDLR 427 (492)
Q Consensus 369 ~~~~~~~~~~~~~~~-~~~~~~~~~s~~~~~Li~~~L~~dP~~R~t~~e~l~Hp~f~~~~ 427 (492)
+-|..+.+|...... +...+ +.++.-+.||+++||..||.+|++.+|+|.||||+++.
T Consensus 233 ~~F~Gv~lP~~~~~epLe~k~-p~~s~~~ld~~k~cL~~dP~~R~sc~qll~H~yFd~~~ 291 (396)
T KOG0593|consen 233 PFFHGVRLPEPEHPEPLERKY-PKISNVLLDLLKKCLKMDPDDRLSCEQLLHHPYFDGFI 291 (396)
T ss_pred CceeeeecCCCCCccchhhhc-ccchHHHHHHHHHHhcCCccccccHHHHhcChHHHHHH
Confidence 888999999876543 33334 56788999999999999999999999999999997654
No 3
>KOG0661 consensus MAPK related serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=3.3e-60 Score=461.29 Aligned_cols=283 Identities=37% Similarity=0.657 Sum_probs=254.7
Q ss_pred ccceeEeeeeccCCceEEEEEEEcCCCCEEEEEEeccch-----hhHHHHHHHHHHcC-CCCccccceeeeeccCCCceE
Q 011138 136 TISYMAERVVGTGSFGVVFQAKCLETGDSVAIKKVLQDK-----RYKNRELQIMRLLN-HPNVVSLKHCFFSTTEKDELY 209 (492)
Q Consensus 136 ~~~y~~~~~lG~G~fg~Vy~~~~~~~g~~vAiK~~~~~~-----~~~~~E~~il~~l~-h~nIv~l~~~~~~~~~~~~~~ 209 (492)
..+|.+.+.||.|.||.||+|+.+.+|+.||||++++.- -...||+.-|++|+ |||||+|.+++.+.. ..
T Consensus 9 m~RY~~i~klGDGTfGsV~la~~~~~~~~VAIK~MK~Kf~s~ee~~nLREvksL~kln~hpniikL~Evi~d~~----~~ 84 (538)
T KOG0661|consen 9 MDRYTVIRKLGDGTFGSVYLAKSKETGELVAIKKMKKKFYSWEECMNLREVKSLRKLNPHPNIIKLKEVIRDND----RI 84 (538)
T ss_pred HHHHHHHHHhcCCcceeEEEeeecCCCceeeHHHHHhhhccHHHHHHHHHHHHHHhcCCCCcchhhHHHhhccC----ce
Confidence 357999999999999999999999999999999886532 22348999999999 999999999984322 17
Q ss_pred EEEEeeechhhHHHHhhhhhhcCCCcCHHHHHHHHHHHHHHHHHHHhhCCcccCCCCCCceEEcCCCCcEEEeeecCccc
Q 011138 210 LNLVLEYISETVYRVSKHYTRMNQHVPILYVQLYTYQICRALNYLHHVVGVCHRDIKPQNLLVNPHTHQLKICDFGSAKM 289 (492)
Q Consensus 210 ~~lV~E~~~~~l~~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~yLH~~~givHrDlKp~NILl~~~~~~vkL~DFG~a~~ 289 (492)
+|+|||||+..|+++++.. +..|++..++.|++||+.||+|+|+ +|+.||||||||||+.... .|||+|||+|+.
T Consensus 85 L~fVfE~Md~NLYqLmK~R---~r~fse~~irnim~QilqGL~hiHk-~GfFHRDlKPENiLi~~~~-~iKiaDFGLARe 159 (538)
T KOG0661|consen 85 LYFVFEFMDCNLYQLMKDR---NRLFSESDIRNIMYQILQGLAHIHK-HGFFHRDLKPENILISGND-VIKIADFGLARE 159 (538)
T ss_pred EeeeHHhhhhhHHHHHhhc---CCcCCHHHHHHHHHHHHHHHHHHHh-cCcccccCChhheEecccc-eeEecccccccc
Confidence 9999999999999988764 6789999999999999999999997 9999999999999999655 799999999999
Q ss_pred cCCCCCCccceeccCccCchhhcCCCCCCcchhhHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCCHHHHhhcC-
Q 011138 290 LVPGEPNISYICSRYYRAPELIFGATEYTTAIDMWSIGCVLAELLLGQPLFPGESGVDQLVEIIKILGTPTREEIKCMN- 368 (492)
Q Consensus 290 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DvwSlGvil~ell~G~~pf~~~~~~~~~~~i~~~~g~p~~~~~~~~~- 368 (492)
+....+.+.++.|++|+|||+++....|+.++||||+|||++|+.+-++.|+|.+..+++.+|+.++|+|....|....
T Consensus 160 v~SkpPYTeYVSTRWYRAPEvLLrs~~Ys~pvD~wA~GcI~aEl~sLrPLFPG~sE~Dqi~KIc~VLGtP~~~~~~eg~~ 239 (538)
T KOG0661|consen 160 VRSKPPYTEYVSTRWYRAPEVLLRSGYYSSPVDMWAVGCIMAELYSLRPLFPGASEIDQIYKICEVLGTPDKDSWPEGYN 239 (538)
T ss_pred cccCCCcchhhhcccccchHHhhhccccCCchHHHHHHHHHHHHHHhcccCCCCcHHHHHHHHHHHhCCCccccchhHHH
Confidence 9888899999999999999999999999999999999999999999999999999999999999999999988876532
Q ss_pred -CCCcccCCCcccCCCcccccCCCCChhHhhhhccccccCCCCcCCHHHhhCCCCCCCCCC
Q 011138 369 -PNYTEFKFPQIKAHPWHKIFHKRMPPEALDLVSRLLQYSPSLRCTALEACAHPFFDDLRD 428 (492)
Q Consensus 369 -~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~Li~~~L~~dP~~R~t~~e~l~Hp~f~~~~~ 428 (492)
.....+.||+.+..++...++. .++++.+||.+||.+||.+||||.|+|+||||+....
T Consensus 240 La~~mnf~~P~~~~~~l~~L~p~-~s~~~~~li~~ll~WDP~kRpTA~~al~~pffq~~~~ 299 (538)
T KOG0661|consen 240 LASAMNFRFPQVKPSPLKDLLPN-ASSEAASLIERLLAWDPDKRPTASQALQHPFFQVGRA 299 (538)
T ss_pred HHHHhccCCCcCCCCChHHhCcc-cCHHHHHHHHHHhcCCCccCccHHHHhcCcccccccc
Confidence 2334578898888888887766 9999999999999999999999999999999986543
No 4
>KOG0615 consensus Serine/threonine protein kinase Chk2 and related proteins [Cell cycle control, cell division, chromosome partitioning]
Probab=100.00 E-value=9.6e-60 Score=450.79 Aligned_cols=256 Identities=34% Similarity=0.523 Sum_probs=213.6
Q ss_pred cceeEeeeeccCCceEEEEEEEcCCCCEEEEEEeccch-----------hhHHHHHHHHHHcCCCCccccceeeeeccCC
Q 011138 137 ISYMAERVVGTGSFGVVFQAKCLETGDSVAIKKVLQDK-----------RYKNRELQIMRLLNHPNVVSLKHCFFSTTEK 205 (492)
Q Consensus 137 ~~y~~~~~lG~G~fg~Vy~~~~~~~g~~vAiK~~~~~~-----------~~~~~E~~il~~l~h~nIv~l~~~~~~~~~~ 205 (492)
..|.+.+.||+|+||.|-+|..+.||+.||||++.+.. ...++|++||++|+|||||+++++| .
T Consensus 172 d~yii~~~LGsGafg~Vkla~e~~tgk~vAiKIi~krk~~~~s~~~~~~~~v~~EieILkkL~HP~IV~~~d~f-----~ 246 (475)
T KOG0615|consen 172 DYYIISKTLGSGAFGLVKLAYEKKTGKQVAIKIINKRKSTGCSRAIAKTRDVQNEIEILKKLSHPNIVRIKDFF-----E 246 (475)
T ss_pred ceeEeeeeecCCceeEEEEEEEcccCcEEEeeeeehhhcccccccccchhhhHHHHHHHHhcCCCCEEEEeeee-----e
Confidence 35889999999999999999999999999999985432 1235899999999999999999999 5
Q ss_pred CceEEEEEeeechhh-HHHHhhhhhhcCCCcCHHHHHHHHHHHHHHHHHHHhhCCcccCCCCCCceEEcCCC--CcEEEe
Q 011138 206 DELYLNLVLEYISET-VYRVSKHYTRMNQHVPILYVQLYTYQICRALNYLHHVVGVCHRDIKPQNLLVNPHT--HQLKIC 282 (492)
Q Consensus 206 ~~~~~~lV~E~~~~~-l~~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~yLH~~~givHrDlKp~NILl~~~~--~~vkL~ 282 (492)
...+.||||||++|| |.+.+- .++.+.+..-+.+++||+.|+.|||+ +||+||||||+|||+..+. -.+||+
T Consensus 247 ~~ds~YmVlE~v~GGeLfd~vv----~nk~l~ed~~K~~f~Qll~avkYLH~-~GI~HRDiKPeNILl~~~~e~~llKIt 321 (475)
T KOG0615|consen 247 VPDSSYMVLEYVEGGELFDKVV----ANKYLREDLGKLLFKQLLTAVKYLHS-QGIIHRDIKPENILLSNDAEDCLLKIT 321 (475)
T ss_pred cCCceEEEEEEecCccHHHHHH----hccccccchhHHHHHHHHHHHHHHHH-cCcccccCCcceEEeccCCcceEEEec
Confidence 555689999999965 444332 35667777889999999999999997 9999999999999997652 269999
Q ss_pred eecCccccCCCCCCccceeccCccCchhhcCC--CCCCcchhhHHHHHHHHHHHhCCCCCCCCChHH-HHHHHHHHhCCC
Q 011138 283 DFGSAKMLVPGEPNISYICSRYYRAPELIFGA--TEYTTAIDMWSIGCVLAELLLGQPLFPGESGVD-QLVEIIKILGTP 359 (492)
Q Consensus 283 DFG~a~~~~~~~~~~~~~gt~~y~aPE~~~~~--~~~~~~~DvwSlGvil~ell~G~~pf~~~~~~~-~~~~i~~~~g~p 359 (492)
|||+|+....+....+.||||.|.|||++.+. ..+..++|+||+||+||-+|+|.+||....... ...+|.+
T Consensus 322 DFGlAK~~g~~sfm~TlCGTpsYvAPEVl~~kg~~~~~~kVDiWSlGcvLfvcLsG~pPFS~~~~~~sl~eQI~~----- 396 (475)
T KOG0615|consen 322 DFGLAKVSGEGSFMKTLCGTPSYVAPEVLASKGVEYYPSKVDIWSLGCVLFVCLSGYPPFSEEYTDPSLKEQILK----- 396 (475)
T ss_pred ccchhhccccceehhhhcCCccccChhheecCCeecccchheeeeccceEEEEeccCCCcccccCCccHHHHHhc-----
Confidence 99999998888888899999999999999643 345668999999999999999999998876555 3444433
Q ss_pred CHHHHhhcCCCCcccCCCcccCCCcccccCCCCChhHhhhhccccccCCCCcCCHHHhhCCCCCCCCC
Q 011138 360 TREEIKCMNPNYTEFKFPQIKAHPWHKIFHKRMPPEALDLVSRLLQYSPSLRCTALEACAHPFFDDLR 427 (492)
Q Consensus 360 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~Li~~~L~~dP~~R~t~~e~l~Hp~f~~~~ 427 (492)
..+. +....|..+++++++||.+||+.||++|||++|+|+||||+...
T Consensus 397 ------------G~y~--------f~p~~w~~Iseea~dlI~~mL~VdP~~R~s~~eaL~hpW~~~~~ 444 (475)
T KOG0615|consen 397 ------------GRYA--------FGPLQWDRISEEALDLINWMLVVDPENRPSADEALNHPWFKDAP 444 (475)
T ss_pred ------------Cccc--------ccChhhhhhhHHHHHHHHHhhEeCcccCcCHHHHhcChhhhccc
Confidence 1111 12234567999999999999999999999999999999999764
No 5
>KOG0659 consensus Cdk activating kinase (CAK)/RNA polymerase II transcription initiation/nucleotide excision repair factor TFIIH/TFIIK, kinase subunit CDK7 [Cell cycle control, cell division, chromosome partitioning; Transcription; Replication, recombination and repair]
Probab=100.00 E-value=4.2e-58 Score=416.86 Aligned_cols=276 Identities=39% Similarity=0.724 Sum_probs=242.7
Q ss_pred ceeEeeeeccCCceEEEEEEEcCCCCEEEEEEeccch------hhHHHHHHHHHHcCCCCccccceeeeeccCCCceEEE
Q 011138 138 SYMAERVVGTGSFGVVFQAKCLETGDSVAIKKVLQDK------RYKNRELQIMRLLNHPNVVSLKHCFFSTTEKDELYLN 211 (492)
Q Consensus 138 ~y~~~~~lG~G~fg~Vy~~~~~~~g~~vAiK~~~~~~------~~~~~E~~il~~l~h~nIv~l~~~~~~~~~~~~~~~~ 211 (492)
+|...+.||+|.||.||+|++..||+.||||++...+ ...-||++.|+.++|+||+.++++| .....+.
T Consensus 3 rY~~~~~lGEG~~gvVyka~d~~t~~~VAIKKIkl~~~kdGi~~talREIK~Lqel~h~nIi~LiD~F-----~~~~~l~ 77 (318)
T KOG0659|consen 3 RYEKLEKLGEGTYGVVYKARDTETGKRVAIKKIKLGNAKDGINRTALREIKLLQELKHPNIIELIDVF-----PHKSNLS 77 (318)
T ss_pred hhhhhhhhcCcceEEEEEEEecCCCcEEEEEEeeccccccCccHHHHHHHHHHHHccCcchhhhhhhc-----cCCCceE
Confidence 5888999999999999999999999999999996432 2345899999999999999999999 5555689
Q ss_pred EEeeechhhHHHHhhhhhhcCCCcCHHHHHHHHHHHHHHHHHHHhhCCcccCCCCCCceEEcCCCCcEEEeeecCccccC
Q 011138 212 LVLEYISETVYRVSKHYTRMNQHVPILYVQLYTYQICRALNYLHHVVGVCHRDIKPQNLLVNPHTHQLKICDFGSAKMLV 291 (492)
Q Consensus 212 lV~E~~~~~l~~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~yLH~~~givHrDlKp~NILl~~~~~~vkL~DFG~a~~~~ 291 (492)
||+||++.+|...++. ....++...++.|+.++++||+|||+ +.|+||||||+|+||++++ .+||+|||+|+.+.
T Consensus 78 lVfEfm~tdLe~vIkd---~~i~l~pa~iK~y~~m~LkGl~y~H~-~~IlHRDlKPnNLLis~~g-~lKiADFGLAr~f~ 152 (318)
T KOG0659|consen 78 LVFEFMPTDLEVVIKD---KNIILSPADIKSYMLMTLKGLAYCHS-KWILHRDLKPNNLLISSDG-QLKIADFGLARFFG 152 (318)
T ss_pred EEEEeccccHHHHhcc---cccccCHHHHHHHHHHHHHHHHHHHh-hhhhcccCCccceEEcCCC-cEEeecccchhccC
Confidence 9999999998887654 34678899999999999999999997 9999999999999999998 89999999999875
Q ss_pred CCCC-CccceeccCccCchhhcCCCCCCcchhhHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCCHHHHhhcC--
Q 011138 292 PGEP-NISYICSRYYRAPELIFGATEYTTAIDMWSIGCVLAELLLGQPLFPGESGVDQLVEIIKILGTPTREEIKCMN-- 368 (492)
Q Consensus 292 ~~~~-~~~~~gt~~y~aPE~~~~~~~~~~~~DvwSlGvil~ell~G~~pf~~~~~~~~~~~i~~~~g~p~~~~~~~~~-- 368 (492)
+... ....+.|.+|+|||+++|...|+..+||||.|||+.||+.|.+.|+|.++.+|+..|++.+|+|.++.|+++.
T Consensus 153 ~p~~~~~~~V~TRWYRAPELLfGsr~Yg~~VDmWavGCI~AELllr~P~fpG~sDidQL~~If~~LGTP~~~~WP~~~~l 232 (318)
T KOG0659|consen 153 SPNRIQTHQVVTRWYRAPELLFGSRQYGTGVDMWAVGCIFAELLLRVPFFPGDSDIDQLSKIFRALGTPTPDQWPEMTSL 232 (318)
T ss_pred CCCcccccceeeeeccChHHhccchhcCCcchhhhHHHHHHHHHccCCCCCCCchHHHHHHHHHHcCCCCcccCcccccc
Confidence 4433 3344889999999999999999999999999999999999999999999999999999999999999999875
Q ss_pred CCCcccC-CCcccCCCcccccCCCCChhHhhhhccccccCCCCcCCHHHhhCCCCCCCCC
Q 011138 369 PNYTEFK-FPQIKAHPWHKIFHKRMPPEALDLVSRLLQYSPSLRCTALEACAHPFFDDLR 427 (492)
Q Consensus 369 ~~~~~~~-~~~~~~~~~~~~~~~~~s~~~~~Li~~~L~~dP~~R~t~~e~l~Hp~f~~~~ 427 (492)
++|..++ +|.. +... +.+..++++.||+.+||.+||.+|+|+.|+|.|+||+...
T Consensus 233 pdY~~~~~~P~~---~~~~-lf~aas~d~ldLl~~m~~ynP~~Rita~qaL~~~yf~~~P 288 (318)
T KOG0659|consen 233 PDYVKIQQFPKP---PLNN-LFPAASSDALDLLSKMLTYNPKKRITASQALKHPYFKSLP 288 (318)
T ss_pred ccHHHHhcCCCC---cccc-ccccccHHHHHHHHhhhccCchhcccHHHHhcchhhhcCC
Confidence 6666665 3332 2222 3456789999999999999999999999999999999754
No 6
>PTZ00036 glycogen synthase kinase; Provisional
Probab=100.00 E-value=7.5e-57 Score=467.08 Aligned_cols=311 Identities=54% Similarity=1.016 Sum_probs=273.9
Q ss_pred cceeEeeeeccCCceEEEEEEEcCCCCEEEEEEeccchhhHHHHHHHHHHcCCCCccccceeeeecc---CCCceEEEEE
Q 011138 137 ISYMAERVVGTGSFGVVFQAKCLETGDSVAIKKVLQDKRYKNRELQIMRLLNHPNVVSLKHCFFSTT---EKDELYLNLV 213 (492)
Q Consensus 137 ~~y~~~~~lG~G~fg~Vy~~~~~~~g~~vAiK~~~~~~~~~~~E~~il~~l~h~nIv~l~~~~~~~~---~~~~~~~~lV 213 (492)
.+|.+++.||+|+||.||+|.+..+++.||||++..+.....+|+.+|+.++|||||+++++|+... .....++++|
T Consensus 66 ~~y~~~~~LG~G~fg~Vy~~~~~~~~~~vAiK~i~~~~~~~~~Ei~il~~l~h~niv~l~~~~~~~~~~~~~~~~~l~lv 145 (440)
T PTZ00036 66 KSYKLGNIIGNGSFGVVYEAICIDTSEKVAIKKVLQDPQYKNRELLIMKNLNHINIIFLKDYYYTECFKKNEKNIFLNVV 145 (440)
T ss_pred CeEEEeEEEEeCCCEEEEEEEECCCCCEEEEEEEecCcchHHHHHHHHHhcCCCCCcceeeeEeecccccCCCceEEEEE
Confidence 4699999999999999999999999999999999777777778999999999999999999876542 1334578899
Q ss_pred eeechhhHHHHhhhhhhcCCCcCHHHHHHHHHHHHHHHHHHHhhCCcccCCCCCCceEEcCCCCcEEEeeecCccccCCC
Q 011138 214 LEYISETVYRVSKHYTRMNQHVPILYVQLYTYQICRALNYLHHVVGVCHRDIKPQNLLVNPHTHQLKICDFGSAKMLVPG 293 (492)
Q Consensus 214 ~E~~~~~l~~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~yLH~~~givHrDlKp~NILl~~~~~~vkL~DFG~a~~~~~~ 293 (492)
|||+++++...+.........+++..++.++.||+.||.|||+ +||+||||||+|||++.++..+||+|||+|+.....
T Consensus 146 mE~~~~~l~~~~~~~~~~~~~l~~~~~~~~~~qi~~gL~yLH~-~~IiHrDLKp~NILl~~~~~~vkL~DFGla~~~~~~ 224 (440)
T PTZ00036 146 MEFIPQTVHKYMKHYARNNHALPLFLVKLYSYQLCRALAYIHS-KFICHRDLKPQNLLIDPNTHTLKLCDFGSAKNLLAG 224 (440)
T ss_pred EecCCccHHHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHH-CCEecCCcCHHHEEEcCCCCceeeeccccchhccCC
Confidence 9999998888777666667789999999999999999999997 999999999999999977657999999999877665
Q ss_pred CCCccceeccCccCchhhcCCCCCCcchhhHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCCHHHHhhcCCCCcc
Q 011138 294 EPNISYICSRYYRAPELIFGATEYTTAIDMWSIGCVLAELLLGQPLFPGESGVDQLVEIIKILGTPTREEIKCMNPNYTE 373 (492)
Q Consensus 294 ~~~~~~~gt~~y~aPE~~~~~~~~~~~~DvwSlGvil~ell~G~~pf~~~~~~~~~~~i~~~~g~p~~~~~~~~~~~~~~ 373 (492)
......+||+.|+|||++.+...|+.++|||||||++|||++|.+||.+.+..+.+..+++.+|.|..+.+..+++.+..
T Consensus 225 ~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwSlGvil~elltG~~pf~~~~~~~~~~~i~~~~~~p~~~~~~~~~~~~~~ 304 (440)
T PTZ00036 225 QRSVSYICSRFYRAPELMLGATNYTTHIDLWSLGCIIAEMILGYPIFSGQSSVDQLVRIIQVLGTPTEDQLKEMNPNYAD 304 (440)
T ss_pred CCcccCCCCcCccCHHHhcCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCCHHHHHHhchhhhc
Confidence 55667789999999999987767999999999999999999999999999999999999999999999999999999999
Q ss_pred cCCCcccCCCcccccCCCCChhHhhhhccccccCCCCcCCHHHhhCCCCCCCCCCCCCCCCC-CCCCCCCCCCCcc
Q 011138 374 FKFPQIKAHPWHKIFHKRMPPEALDLVSRLLQYSPSLRCTALEACAHPFFDDLRDPNTCLPN-GRPLPTLFNFTAQ 448 (492)
Q Consensus 374 ~~~~~~~~~~~~~~~~~~~s~~~~~Li~~~L~~dP~~R~t~~e~l~Hp~f~~~~~~~~~~~~-~~~~~~~~~~~~~ 448 (492)
+.+|.+....+...++...++++++||.+||++||.+|||+.|+|+||||++++++...++. ...+|.+++|...
T Consensus 305 ~~~~~~~~~~l~~~~p~~~~~~~~~li~~~L~~dP~~R~ta~e~l~hp~f~~~~~~~~~~~~~~~~~~~~~~~~~~ 380 (440)
T PTZ00036 305 IKFPDVKPKDLKKVFPKGTPDDAINFISQFLKYEPLKRLNPIEALADPFFDDLRDPCIKLPKYIDKLPDLFNFCDA 380 (440)
T ss_pred ccCCccCchhHHHHhccCCCHHHHHHHHHHCCCChhHCcCHHHHhCChhHHhhhcccccCCCCCCCCCCCcCCCHH
Confidence 99998887778778888899999999999999999999999999999999998876544443 2456666666654
No 7
>KOG0575 consensus Polo-like serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]
Probab=100.00 E-value=2.4e-57 Score=454.79 Aligned_cols=251 Identities=33% Similarity=0.543 Sum_probs=223.2
Q ss_pred cceeEeeeeccCCceEEEEEEEcCCCCEEEEEEeccc-------hhhHHHHHHHHHHcCCCCccccceeeeeccCCCceE
Q 011138 137 ISYMAERVVGTGSFGVVFQAKCLETGDSVAIKKVLQD-------KRYKNRELQIMRLLNHPNVVSLKHCFFSTTEKDELY 209 (492)
Q Consensus 137 ~~y~~~~~lG~G~fg~Vy~~~~~~~g~~vAiK~~~~~-------~~~~~~E~~il~~l~h~nIv~l~~~~~~~~~~~~~~ 209 (492)
..|..+++||+|||++||.+++..+|+.||+|++.+. .....+|++|.+.|+|||||+++++| +|..+
T Consensus 18 ~~Y~~g~~LGkGgFA~cYe~~~~~tge~~A~KvVpk~~l~k~~~reKv~~EIeIHr~L~HpnIV~f~~~F-----EDs~n 92 (592)
T KOG0575|consen 18 KRYKRGRFLGKGGFARCYEARDLDTGEVVAVKVVPKKLLKKPKQREKVLNEIEIHRSLKHPNIVQFYHFF-----EDSNN 92 (592)
T ss_pred ceeeeeeeeccCcceEEEEEEEcCCCcEEEEEEeehHHhcCcchHHHHHHHHHHHHhcCCCcEEeeeeEe-----ecCCc
Confidence 4699999999999999999999999999999998552 23456899999999999999999999 88889
Q ss_pred EEEEeeechhhHH-HHhhhhhhcCCCcCHHHHHHHHHHHHHHHHHHHhhCCcccCCCCCCceEEcCCCCcEEEeeecCcc
Q 011138 210 LNLVLEYISETVY-RVSKHYTRMNQHVPILYVQLYTYQICRALNYLHHVVGVCHRDIKPQNLLVNPHTHQLKICDFGSAK 288 (492)
Q Consensus 210 ~~lV~E~~~~~l~-~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~yLH~~~givHrDlKp~NILl~~~~~~vkL~DFG~a~ 288 (492)
+|||+|+|..+.+ .+++ ..+.+++.+++.|++||+.||.|||+ ++|||||||..|+|++.+. +|||+|||+|.
T Consensus 93 VYivLELC~~~sL~el~K----rrk~ltEpEary~l~QIv~GlkYLH~-~~IiHRDLKLGNlfL~~~~-~VKIgDFGLAt 166 (592)
T KOG0575|consen 93 VYIVLELCHRGSLMELLK----RRKPLTEPEARYFLRQIVEGLKYLHS-LGIIHRDLKLGNLFLNENM-NVKIGDFGLAT 166 (592)
T ss_pred eEEEEEecCCccHHHHHH----hcCCCCcHHHHHHHHHHHHHHHHHHh-cCceecccchhheeecCcC-cEEecccceee
Confidence 9999999996543 3333 35789999999999999999999997 9999999999999999988 79999999999
Q ss_pred ccCC-CCCCccceeccCccCchhhcCCCCCCcchhhHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCCHHHHhhc
Q 011138 289 MLVP-GEPNISYICSRYYRAPELIFGATEYTTAIDMWSIGCVLAELLLGQPLFPGESGVDQLVEIIKILGTPTREEIKCM 367 (492)
Q Consensus 289 ~~~~-~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DvwSlGvil~ell~G~~pf~~~~~~~~~~~i~~~~g~p~~~~~~~~ 367 (492)
.+.. ++...+.||||.|+|||++... .++..+||||+|||||.||+|+|||...+-.+.+..|..
T Consensus 167 ~le~~~Erk~TlCGTPNYIAPEVl~k~-gHsfEvDiWSlGcvmYtLL~G~PPFetk~vkety~~Ik~------------- 232 (592)
T KOG0575|consen 167 QLEYDGERKKTLCGTPNYIAPEVLNKS-GHSFEVDIWSLGCVMYTLLVGRPPFETKTVKETYNKIKL------------- 232 (592)
T ss_pred eecCcccccceecCCCcccChhHhccC-CCCCchhhhhhhhHHHhhhhCCCCcccchHHHHHHHHHh-------------
Confidence 8864 4778899999999999999754 489999999999999999999999999988888888866
Q ss_pred CCCCcccCCCcccCCCcccccCCCCChhHhhhhccccccCCCCcCCHHHhhCCCCCCCCCC
Q 011138 368 NPNYTEFKFPQIKAHPWHKIFHKRMPPEALDLVSRLLQYSPSLRCTALEACAHPFFDDLRD 428 (492)
Q Consensus 368 ~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~Li~~~L~~dP~~R~t~~e~l~Hp~f~~~~~ 428 (492)
.++.+|. .++.++++||.+||+.||.+|||++++|.|+||+.-.-
T Consensus 233 ----~~Y~~P~------------~ls~~A~dLI~~lL~~~P~~Rpsl~~vL~h~Ff~~g~~ 277 (592)
T KOG0575|consen 233 ----NEYSMPS------------HLSAEAKDLIRKLLRPNPSERPSLDEVLDHPFFKSGFT 277 (592)
T ss_pred ----cCccccc------------ccCHHHHHHHHHHhcCCcccCCCHHHHhcCHhhhCCCc
Confidence 4555553 68999999999999999999999999999999965433
No 8
>KOG0660 consensus Mitogen-activated protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=7.7e-58 Score=433.22 Aligned_cols=289 Identities=40% Similarity=0.704 Sum_probs=252.7
Q ss_pred ceeEeeeeccCCceEEEEEEEcCCCCEEEEEEecc------chhhHHHHHHHHHHcCCCCccccceeeeeccCCCceEEE
Q 011138 138 SYMAERVVGTGSFGVVFQAKCLETGDSVAIKKVLQ------DKRYKNRELQIMRLLNHPNVVSLKHCFFSTTEKDELYLN 211 (492)
Q Consensus 138 ~y~~~~~lG~G~fg~Vy~~~~~~~g~~vAiK~~~~------~~~~~~~E~~il~~l~h~nIv~l~~~~~~~~~~~~~~~~ 211 (492)
.|...+.||.|+||.|+.|.++.+|+.||||++.. +.....||+.+|+.++|+||+.+++.+.........-+|
T Consensus 23 ~y~~~~~iG~GAyGvVcsA~~~~t~~~VAIKKi~~~F~~~~~akRtlRElklLr~~~HeNIi~l~di~~p~~~~~f~DvY 102 (359)
T KOG0660|consen 23 YYVLIEPIGRGAYGVVCSAKDKRTGEKVAIKKILNPFENQIDAKRTLRELKLLRHLRHENIIGLLDIFRPPSRDKFNDVY 102 (359)
T ss_pred eecccccccCcceeeEEEEEEcCCCCEeehhhhhhhhhchHHHHHHHHHHHHHHHhcCCCcceEEeecccccccccceeE
Confidence 36667899999999999999999999999999852 123345899999999999999999998764444555689
Q ss_pred EEeeechhhHHHHhhhhhhcCCCcCHHHHHHHHHHHHHHHHHHHhhCCcccCCCCCCceEEcCCCCcEEEeeecCccccC
Q 011138 212 LVLEYISETVYRVSKHYTRMNQHVPILYVQLYTYQICRALNYLHHVVGVCHRDIKPQNLLVNPHTHQLKICDFGSAKMLV 291 (492)
Q Consensus 212 lV~E~~~~~l~~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~yLH~~~givHrDlKp~NILl~~~~~~vkL~DFG~a~~~~ 291 (492)
+|+|+|+.+|...++. ++.++...++.+++||++||+|+|+ .||+||||||.|+|++.+. .+||+|||+|+...
T Consensus 103 iV~elMetDL~~iik~----~~~L~d~H~q~f~YQiLrgLKyiHS-AnViHRDLKPsNll~n~~c-~lKI~DFGLAR~~~ 176 (359)
T KOG0660|consen 103 LVFELMETDLHQIIKS----QQDLTDDHAQYFLYQILRGLKYIHS-ANVIHRDLKPSNLLLNADC-DLKICDFGLARYLD 176 (359)
T ss_pred EehhHHhhHHHHHHHc----CccccHHHHHHHHHHHHHhcchhhc-ccccccccchhheeeccCC-CEEeccccceeecc
Confidence 9999999888887654 4558999999999999999999997 8999999999999999998 79999999999875
Q ss_pred C---CCCCccceeccCccCchhhcCCCCCCcchhhHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCCHHHHhhcC
Q 011138 292 P---GEPNISYICSRYYRAPELIFGATEYTTAIDMWSIGCVLAELLLGQPLFPGESGVDQLVEIIKILGTPTREEIKCMN 368 (492)
Q Consensus 292 ~---~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DvwSlGvil~ell~G~~pf~~~~~~~~~~~i~~~~g~p~~~~~~~~~ 368 (492)
+ ....+.++.|.+|+|||++.....|+.++||||+|||+.|||+|++.|+|.+..+|+..|+..+|+|.++.+....
T Consensus 177 ~~~~~~~mTeYVaTRWYRAPElll~~~~Yt~aiDiWSvGCI~AEmL~gkplFpG~d~v~Ql~lI~~~lGtP~~e~l~~i~ 256 (359)
T KOG0660|consen 177 KFFEDGFMTEYVATRWYRAPELLLNSSEYTKAIDIWSVGCILAEMLTGKPLFPGKDYVHQLQLILELLGTPSEEDLQKIR 256 (359)
T ss_pred ccCcccchhcceeeeeecCHHHHhccccccchhhhhhhhHHHHHHHcCCCCCCCCchHHHHHHHHHhcCCCCHHHHHHhc
Confidence 3 3445678999999999999988899999999999999999999999999999999999999999999999887654
Q ss_pred CC-Cc--ccCCCcccCCCcccccCCCCChhHhhhhccccccCCCCcCCHHHhhCCCCCCCCCCCCCCC
Q 011138 369 PN-YT--EFKFPQIKAHPWHKIFHKRMPPEALDLVSRLLQYSPSLRCTALEACAHPFFDDLRDPNTCL 433 (492)
Q Consensus 369 ~~-~~--~~~~~~~~~~~~~~~~~~~~s~~~~~Li~~~L~~dP~~R~t~~e~l~Hp~f~~~~~~~~~~ 433 (492)
.. .. -...|..+..+|...|+ ++++++.||+.+||++||.+|+|++|+|+||||..+.++....
T Consensus 257 s~~ar~yi~slp~~p~~~f~~~fp-~a~p~AidLlekmL~fdP~kRita~eAL~hPYl~~~hdp~dEP 323 (359)
T KOG0660|consen 257 SEKARPYIKSLPQIPKQPFSSIFP-NANPLAIDLLEKMLVFDPKKRITAEEALAHPYLAPYHDPEDEP 323 (359)
T ss_pred cHHHHHHHHhCCCCCCCCHHHHcC-CCCHHHHHHHHHHhccCccccCCHHHHhcChhhhhhcCCccCC
Confidence 21 11 12467777788888776 8999999999999999999999999999999999999987754
No 9
>KOG0663 consensus Protein kinase PITSLRE and related kinases [General function prediction only]
Probab=100.00 E-value=3e-57 Score=422.94 Aligned_cols=285 Identities=34% Similarity=0.579 Sum_probs=250.7
Q ss_pred ccceeEeeeeccCCceEEEEEEEcCCCCEEEEEEeccchh------hHHHHHHHHHHcCCCCccccceeeeeccCCCceE
Q 011138 136 TISYMAERVVGTGSFGVVFQAKCLETGDSVAIKKVLQDKR------YKNRELQIMRLLNHPNVVSLKHCFFSTTEKDELY 209 (492)
Q Consensus 136 ~~~y~~~~~lG~G~fg~Vy~~~~~~~g~~vAiK~~~~~~~------~~~~E~~il~~l~h~nIv~l~~~~~~~~~~~~~~ 209 (492)
...|+....|++|+||.||+|+++.|++.||+|+++.++. ...||+.+|.+++|||||.+..+.....- + .
T Consensus 75 v~efe~lnrI~EGtyGiVYRakdk~t~eIVALKr~kmekek~GFPItsLREIniLl~~~H~NIV~vkEVVvG~~~-d--~ 151 (419)
T KOG0663|consen 75 VEEFEKLNRIEEGTYGVVYRAKDKKTDEIVALKRLKMEKEKEGFPITSLREINILLKARHPNIVEVKEVVVGSNM-D--K 151 (419)
T ss_pred HHHHHHHhhcccCcceeEEEeccCCcceeEEeeecccccccCCCcchhHHHHHHHHhcCCCCeeeeEEEEecccc-c--e
Confidence 3469999999999999999999999999999999966542 12489999999999999999998766542 2 3
Q ss_pred EEEEeeechhhHHHHhhhhhhcCCCcCHHHHHHHHHHHHHHHHHHHhhCCcccCCCCCCceEEcCCCCcEEEeeecCccc
Q 011138 210 LNLVLEYISETVYRVSKHYTRMNQHVPILYVQLYTYQICRALNYLHHVVGVCHRDIKPQNLLVNPHTHQLKICDFGSAKM 289 (492)
Q Consensus 210 ~~lV~E~~~~~l~~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~yLH~~~givHrDlKp~NILl~~~~~~vkL~DFG~a~~ 289 (492)
+|||||||+.++..++.. ..++|...+++.++.|+++||+|||+ +.|+||||||+|+|++..| .+||+|||+|+.
T Consensus 152 iy~VMe~~EhDLksl~d~---m~q~F~~~evK~L~~QlL~glk~lH~-~wilHRDLK~SNLLm~~~G-~lKiaDFGLAR~ 226 (419)
T KOG0663|consen 152 IYIVMEYVEHDLKSLMET---MKQPFLPGEVKTLMLQLLRGLKHLHD-NWILHRDLKTSNLLLSHKG-ILKIADFGLARE 226 (419)
T ss_pred eeeeHHHHHhhHHHHHHh---ccCCCchHHHHHHHHHHHHHHHHHhh-ceeEecccchhheeeccCC-cEEecccchhhh
Confidence 889999999998887654 34789999999999999999999997 9999999999999999777 899999999998
Q ss_pred cCCC-CCCccceeccCccCchhhcCCCCCCcchhhHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCCHHHHhhcC
Q 011138 290 LVPG-EPNISYICSRYYRAPELIFGATEYTTAIDMWSIGCVLAELLLGQPLFPGESGVDQLVEIIKILGTPTREEIKCMN 368 (492)
Q Consensus 290 ~~~~-~~~~~~~gt~~y~aPE~~~~~~~~~~~~DvwSlGvil~ell~G~~pf~~~~~~~~~~~i~~~~g~p~~~~~~~~~ 368 (492)
+... .+.+..+.|.+|+|||+++|...|+.++|+||+|||+.||+++++.|+|.+..+++.+|++.+|.|.+..|+...
T Consensus 227 ygsp~k~~T~lVVTLWYRaPELLLG~~tyst~iDMWSvGCI~aE~l~~kPlf~G~sE~dQl~~If~llGtPte~iwpg~~ 306 (419)
T KOG0663|consen 227 YGSPLKPYTPLVVTLWYRAPELLLGAKTYSTAVDMWSVGCIFAELLTQKPLFPGKSEIDQLDKIFKLLGTPSEAIWPGYS 306 (419)
T ss_pred hcCCcccCcceEEEeeecCHHHhcCCcccCcchhhhhHHHHHHHHHhcCCCCCCCchHHHHHHHHHHhCCCccccCCCcc
Confidence 7443 335667889999999999999999999999999999999999999999999999999999999999999987654
Q ss_pred --CCCcccCCCcccCCCcccccCCC-CChhHhhhhccccccCCCCcCCHHHhhCCCCCCCCCC
Q 011138 369 --PNYTEFKFPQIKAHPWHKIFHKR-MPPEALDLVSRLLQYSPSLRCTALEACAHPFFDDLRD 428 (492)
Q Consensus 369 --~~~~~~~~~~~~~~~~~~~~~~~-~s~~~~~Li~~~L~~dP~~R~t~~e~l~Hp~f~~~~~ 428 (492)
+.+..+.|+......+...|... +++...+|+..+|.+||.+|+||.|+|+|+||.+...
T Consensus 307 ~lp~~k~~~f~~~pyn~lr~kF~~~~lse~g~~Lln~llt~dP~kR~tA~~~L~h~~F~e~P~ 369 (419)
T KOG0663|consen 307 ELPAVKKMTFSEHPYNNLRKKFGALSLSEQGFDLLNKLLTYDPGKRITAEDGLKHEYFRETPL 369 (419)
T ss_pred ccchhhccccCCCCchhhhhhccccccchhHHHHHHHHhccCccccccHHHhhcccccccCCC
Confidence 33445677777777777777665 7899999999999999999999999999999998654
No 10
>KOG0600 consensus Cdc2-related protein kinase [Cell cycle control, cell division, chromosome partitioning]
Probab=100.00 E-value=3.6e-57 Score=443.04 Aligned_cols=284 Identities=37% Similarity=0.623 Sum_probs=241.3
Q ss_pred CccccceeEeeeeccCCceEEEEEEEcCCCCEEEEEEeccch------hhHHHHHHHHHHcCCCCccccceeeeeccCCC
Q 011138 133 PKQTISYMAERVVGTGSFGVVFQAKCLETGDSVAIKKVLQDK------RYKNRELQIMRLLNHPNVVSLKHCFFSTTEKD 206 (492)
Q Consensus 133 ~~~~~~y~~~~~lG~G~fg~Vy~~~~~~~g~~vAiK~~~~~~------~~~~~E~~il~~l~h~nIv~l~~~~~~~~~~~ 206 (492)
+.....|+..+.||+|.||.||+|++..||+.||+|++..+. ....||+.||++|+||||++|.+..... .
T Consensus 113 ~r~~~~feki~kIGeGTyg~VYkAr~~~tgkivALKKvr~d~~~~~~~~t~~REI~ILr~l~HpNIikL~eivt~~---~ 189 (560)
T KOG0600|consen 113 PRRADSFEKIEKIGEGTYGQVYKARDLETGKIVALKKVRFDNEKEGFPITAIREIKILRRLDHPNIIKLEEIVTSK---L 189 (560)
T ss_pred ccchHHHHHHHHhcCcchhheeEeeecccCcEEEEEEeecccCCCcchHHHHHHHHHHHhcCCCcccceeeEEEec---C
Confidence 455668999999999999999999999999999999996554 2345899999999999999999988653 3
Q ss_pred ceEEEEEeeechhhHHHHhhhhhhcCCCcCHHHHHHHHHHHHHHHHHHHhhCCcccCCCCCCceEEcCCCCcEEEeeecC
Q 011138 207 ELYLNLVLEYISETVYRVSKHYTRMNQHVPILYVQLYTYQICRALNYLHHVVGVCHRDIKPQNLLVNPHTHQLKICDFGS 286 (492)
Q Consensus 207 ~~~~~lV~E~~~~~l~~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~yLH~~~givHrDlKp~NILl~~~~~~vkL~DFG~ 286 (492)
...+|||+|||+.+|..++. ...-.|++.+++.|+.||+.||+|||+ +||+|||||..|||||.+| .+||+|||+
T Consensus 190 ~~siYlVFeYMdhDL~GLl~---~p~vkft~~qIKc~mkQLl~Gl~~cH~-~gvlHRDIK~SNiLidn~G-~LKiaDFGL 264 (560)
T KOG0600|consen 190 SGSIYLVFEYMDHDLSGLLS---SPGVKFTEPQIKCYMKQLLEGLEYCHS-RGVLHRDIKGSNILIDNNG-VLKIADFGL 264 (560)
T ss_pred CceEEEEEecccchhhhhhc---CCCcccChHHHHHHHHHHHHHHHHHhh-cCeeeccccccceEEcCCC-CEEeccccc
Confidence 45699999999998877653 234579999999999999999999997 9999999999999999888 899999999
Q ss_pred ccccCCCC--CCccceeccCccCchhhcCCCCCCcchhhHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCCHHHH
Q 011138 287 AKMLVPGE--PNISYICSRYYRAPELIFGATEYTTAIDMWSIGCVLAELLLGQPLFPGESGVDQLVEIIKILGTPTREEI 364 (492)
Q Consensus 287 a~~~~~~~--~~~~~~gt~~y~aPE~~~~~~~~~~~~DvwSlGvil~ell~G~~pf~~~~~~~~~~~i~~~~g~p~~~~~ 364 (492)
|+.+.... ..+..+.|.+|+|||+++|...|+.++|+||+||||.||++|++.|+|.+..+|+..|++.+|.|.+..|
T Consensus 265 Ar~y~~~~~~~~T~rVvTLWYRpPELLLG~t~Yg~aVDlWS~GCIl~El~~gkPI~~G~tEveQl~kIfklcGSP~e~~W 344 (560)
T KOG0600|consen 265 ARFYTPSGSAPYTSRVVTLWYRPPELLLGATSYGTAVDLWSVGCILAELFLGKPILQGRTEVEQLHKIFKLCGSPTEDYW 344 (560)
T ss_pred eeeccCCCCcccccceEEeeccChHHhcCCcccccceeehhhhHHHHHHHcCCCCcCCccHHHHHHHHHHHhCCCChhcc
Confidence 99765443 4667899999999999999999999999999999999999999999999999999999999999999988
Q ss_pred hhcC-CCCcccCCCcccCCCcccccCCCCChhHhhhhccccccCCCCcCCHHHhhCCCCCCC
Q 011138 365 KCMN-PNYTEFKFPQIKAHPWHKIFHKRMPPEALDLVSRLLQYSPSLRCTALEACAHPFFDD 425 (492)
Q Consensus 365 ~~~~-~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~Li~~~L~~dP~~R~t~~e~l~Hp~f~~ 425 (492)
.... |.+..++-...-....... ...+++.+.+|+..||..||.+|.||.++|+|+||+.
T Consensus 345 ~~~kLP~~~~~kp~~~y~r~l~E~-~~~~~~~~l~Ll~~lL~ldP~kR~tA~~aL~seyF~t 405 (560)
T KOG0600|consen 345 PVSKLPHATIFKPQQPYKRRLRET-FKDFPASALDLLEKLLSLDPDKRGTASSALQSEYFTT 405 (560)
T ss_pred ccccCCcccccCCCCcccchHHHH-hccCCHHHHHHHHHHhccCccccccHHHHhcCccccc
Confidence 7222 2222222221111122222 3568999999999999999999999999999999943
No 11
>KOG0598 consensus Ribosomal protein S6 kinase and related proteins [General function prediction only; Signal transduction mechanisms]
Probab=100.00 E-value=3.2e-55 Score=416.93 Aligned_cols=254 Identities=32% Similarity=0.511 Sum_probs=218.8
Q ss_pred cccceeEeeeeccCCceEEEEEEEcCCCCEEEEEEeccc-------hhhHHHHHHHHHHcCCCCccccceeeeeccCCCc
Q 011138 135 QTISYMAERVVGTGSFGVVFQAKCLETGDSVAIKKVLQD-------KRYKNRELQIMRLLNHPNVVSLKHCFFSTTEKDE 207 (492)
Q Consensus 135 ~~~~y~~~~~lG~G~fg~Vy~~~~~~~g~~vAiK~~~~~-------~~~~~~E~~il~~l~h~nIv~l~~~~~~~~~~~~ 207 (492)
...+|++.++||+|+||+||+++.+.|++.||+|++.+. ......|..||..++||+||+++..| ++.
T Consensus 23 ~~~dF~~lkviGkG~fGkV~~Vrk~dt~kiYAmKvl~K~~iv~~~e~~~~~~Er~IL~~v~hPFiv~l~ysF-----Qt~ 97 (357)
T KOG0598|consen 23 GPDDFEILKVIGKGSFGKVFQVRKKDTGKIYAMKVLKKKKIVEKKEVRHTKAERNILSKIKHPFIVKLIYSF-----QTE 97 (357)
T ss_pred ChhheeeeeeeeccCCceEEEEEEcccCceeehhhhhhhHhhhhhhHHHHHHHHHHHHhCCCCcEeeeEEec-----ccC
Confidence 345799999999999999999999999999999988654 23445799999999999999999988 666
Q ss_pred eEEEEEeeechhh-HHHHhhhhhhcCCCcCHHHHHHHHHHHHHHHHHHHhhCCcccCCCCCCceEEcCCCCcEEEeeecC
Q 011138 208 LYLNLVLEYISET-VYRVSKHYTRMNQHVPILYVQLYTYQICRALNYLHHVVGVCHRDIKPQNLLVNPHTHQLKICDFGS 286 (492)
Q Consensus 208 ~~~~lV~E~~~~~-l~~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~yLH~~~givHrDlKp~NILl~~~~~~vkL~DFG~ 286 (492)
..+|||+||+.|| |...+ .....+++..++.|+.+|+.||.|||+ +|||||||||+|||+|.+| .|+|+|||+
T Consensus 98 ~kLylVld~~~GGeLf~hL----~~eg~F~E~~arfYlaEi~lAL~~LH~-~gIiyRDlKPENILLd~~G-Hi~LtDFgL 171 (357)
T KOG0598|consen 98 EKLYLVLDYLNGGELFYHL----QREGRFSEDRARFYLAEIVLALGYLHS-KGIIYRDLKPENILLDEQG-HIKLTDFGL 171 (357)
T ss_pred CeEEEEEeccCCccHHHHH----HhcCCcchhHHHHHHHHHHHHHHHHHh-CCeeeccCCHHHeeecCCC-cEEEecccc
Confidence 6799999999975 33322 235789999999999999999999997 9999999999999999999 599999999
Q ss_pred cccc-CCCCCCccceeccCccCchhhcCCCCCCcchhhHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCCHHHHh
Q 011138 287 AKML-VPGEPNISYICSRYYRAPELIFGATEYTTAIDMWSIGCVLAELLLGQPLFPGESGVDQLVEIIKILGTPTREEIK 365 (492)
Q Consensus 287 a~~~-~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DvwSlGvil~ell~G~~pf~~~~~~~~~~~i~~~~g~p~~~~~~ 365 (492)
++.. ..+....++|||+.|||||++.+. .|+.++|+|||||++|||++|.+||.+.+....+.+|.+.-
T Consensus 172 ~k~~~~~~~~t~tfcGT~eYmAPEil~~~-gy~~~vDWWsLGillYeML~G~pPF~~~~~~~~~~~I~~~k--------- 241 (357)
T KOG0598|consen 172 CKEDLKDGDATRTFCGTPEYMAPEILLGK-GYDKAVDWWSLGILLYEMLTGKPPFYAEDVKKMYDKILKGK--------- 241 (357)
T ss_pred chhcccCCCccccccCCccccChHHHhcC-CCCcccchHhHHHHHHHHhhCCCCCcCccHHHHHHHHhcCc---------
Confidence 9854 344556678999999999999876 49999999999999999999999999999888888886621
Q ss_pred hcCCCCcccCCCcccCCCcccccCCCCChhHhhhhccccccCCCCcC----CHHHhhCCCCCCCCCC
Q 011138 366 CMNPNYTEFKFPQIKAHPWHKIFHKRMPPEALDLVSRLLQYSPSLRC----TALEACAHPFFDDLRD 428 (492)
Q Consensus 366 ~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~Li~~~L~~dP~~R~----t~~e~l~Hp~f~~~~~ 428 (492)
.. ..+..++.++++||+++|+.||++|. .+.++.+||||.++..
T Consensus 242 --------~~-----------~~p~~ls~~ardll~~LL~rdp~~RLg~~~d~~~ik~HpfF~~inW 289 (357)
T KOG0598|consen 242 --------LP-----------LPPGYLSEEARDLLKKLLKRDPRQRLGGPGDAEEIKRHPFFKGINW 289 (357)
T ss_pred --------CC-----------CCCccCCHHHHHHHHHHhccCHHHhcCCCCChHHhhcCcccccCCH
Confidence 00 01234799999999999999999996 6889999999998765
No 12
>KOG0592 consensus 3-phosphoinositide-dependent protein kinase (PDK1) [Signal transduction mechanisms]
Probab=100.00 E-value=2.3e-54 Score=426.63 Aligned_cols=255 Identities=34% Similarity=0.608 Sum_probs=223.7
Q ss_pred ccccceeEeeeeccCCceEEEEEEEcCCCCEEEEEEeccc-------hhhHHHHHHHHHHc-CCCCccccceeeeeccCC
Q 011138 134 KQTISYMAERVVGTGSFGVVFQAKCLETGDSVAIKKVLQD-------KRYKNRELQIMRLL-NHPNVVSLKHCFFSTTEK 205 (492)
Q Consensus 134 ~~~~~y~~~~~lG~G~fg~Vy~~~~~~~g~~vAiK~~~~~-------~~~~~~E~~il~~l-~h~nIv~l~~~~~~~~~~ 205 (492)
+...+|..++.||.|+|++|++|+++.+++.||||++.+. ..+..+|..+|.+| .||.|++|+..| +
T Consensus 70 k~~~DF~Fg~~lGeGSYStV~~A~~~~t~keYAiKVl~K~~Iike~KvkYV~~Ek~~l~~L~~hPgivkLy~TF-----Q 144 (604)
T KOG0592|consen 70 KTPNDFKFGKILGEGSYSTVVLAREKATGKEYAIKVLDKRYIIKEKKVKYVTREKEALTQLSGHPGIVKLYFTF-----Q 144 (604)
T ss_pred CChhhcchhheeccccceeEEEeeecCCCceeeHhhhhHHHHHhhcccchhhHHHHHHHHhhCCCCeEEEEEEe-----e
Confidence 3445799999999999999999999999999999987443 23455799999999 799999999999 7
Q ss_pred CceEEEEEeeech-hhHHHHhhhhhhcCCCcCHHHHHHHHHHHHHHHHHHHhhCCcccCCCCCCceEEcCCCCcEEEeee
Q 011138 206 DELYLNLVLEYIS-ETVYRVSKHYTRMNQHVPILYVQLYTYQICRALNYLHHVVGVCHRDIKPQNLLVNPHTHQLKICDF 284 (492)
Q Consensus 206 ~~~~~~lV~E~~~-~~l~~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~yLH~~~givHrDlKp~NILl~~~~~~vkL~DF 284 (492)
|...+|+|+||++ |+|+.++.++ +.|++..+++|+.||+.||+|||+ +|||||||||||||||.|+ .+||+||
T Consensus 145 D~~sLYFvLe~A~nGdll~~i~K~----Gsfde~caR~YAAeIldAleylH~-~GIIHRDlKPENILLd~dm-hikITDF 218 (604)
T KOG0592|consen 145 DEESLYFVLEYAPNGDLLDLIKKY----GSFDETCARFYAAEILDALEYLHS-NGIIHRDLKPENILLDKDG-HIKITDF 218 (604)
T ss_pred cccceEEEEEecCCCcHHHHHHHh----CcchHHHHHHHHHHHHHHHHHHHh-cCceeccCChhheeEcCCC-cEEEeec
Confidence 7778999999998 5677777664 668999999999999999999997 9999999999999999999 6999999
Q ss_pred cCccccCCCCC--------------CccceeccCccCchhhcCCCCCCcchhhHHHHHHHHHHHhCCCCCCCCChHHHHH
Q 011138 285 GSAKMLVPGEP--------------NISYICSRYYRAPELIFGATEYTTAIDMWSIGCVLAELLLGQPLFPGESGVDQLV 350 (492)
Q Consensus 285 G~a~~~~~~~~--------------~~~~~gt~~y~aPE~~~~~~~~~~~~DvwSlGvil~ell~G~~pf~~~~~~~~~~ 350 (492)
|.|+.+.+... ..+++||..|.+||++.. ...+..+|+|+||||||+|+.|.+||.+.+..-.+.
T Consensus 219 GsAK~l~~~~~~~~~~~~~~~a~s~~~SFVGTAeYVSPElL~~-~~~~~~sDiWAlGCilyQmlaG~PPFra~NeyliFq 297 (604)
T KOG0592|consen 219 GSAKILSPSQKSQENPVDPNQASSRRSSFVGTAEYVSPELLND-SPAGPSSDLWALGCILYQMLAGQPPFRAANEYLIFQ 297 (604)
T ss_pred cccccCChhhccccCccCcccccCcccceeeeecccCHHHhcC-CCCCcccchHHHHHHHHHHhcCCCCCccccHHHHHH
Confidence 99988743211 146899999999999954 458999999999999999999999999999999999
Q ss_pred HHHHHhCCCCHHHHhhcCCCCcccCCCcccCCCcccccCCCCChhHhhhhccccccCCCCcCCHHHhhCCCCCCCCCCC
Q 011138 351 EIIKILGTPTREEIKCMNPNYTEFKFPQIKAHPWHKIFHKRMPPEALDLVSRLLQYSPSLRCTALEACAHPFFDDLRDP 429 (492)
Q Consensus 351 ~i~~~~g~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~Li~~~L~~dP~~R~t~~e~l~Hp~f~~~~~~ 429 (492)
+|+++ ++.|| +..+++++|||+++|..||.+|+|+.||.+||||..+...
T Consensus 298 kI~~l-----------------~y~fp------------~~fp~~a~dLv~KLLv~dp~~Rlt~~qIk~HpFF~~Vdw~ 347 (604)
T KOG0592|consen 298 KIQAL-----------------DYEFP------------EGFPEDARDLIKKLLVRDPSDRLTSQQIKAHPFFEGVDWE 347 (604)
T ss_pred HHHHh-----------------cccCC------------CCCCHHHHHHHHHHHccCccccccHHHHhhCcccccCChh
Confidence 99883 44444 4688999999999999999999999999999999987653
No 13
>KOG0616 consensus cAMP-dependent protein kinase catalytic subunit (PKA) [Signal transduction mechanisms]
Probab=100.00 E-value=2.4e-54 Score=397.81 Aligned_cols=252 Identities=29% Similarity=0.506 Sum_probs=221.9
Q ss_pred ccccceeEeeeeccCCceEEEEEEEcCCCCEEEEEEeccch-------hhHHHHHHHHHHcCCCCccccceeeeeccCCC
Q 011138 134 KQTISYMAERVVGTGSFGVVFQAKCLETGDSVAIKKVLQDK-------RYKNRELQIMRLLNHPNVVSLKHCFFSTTEKD 206 (492)
Q Consensus 134 ~~~~~y~~~~~lG~G~fg~Vy~~~~~~~g~~vAiK~~~~~~-------~~~~~E~~il~~l~h~nIv~l~~~~~~~~~~~ 206 (492)
....+|+..+.||.|+||+|.+++.+.+|..+|+|++.+.+ +...+|..+|+.+.||+++++++.| .|
T Consensus 41 ~~l~dfe~~~tlGtGSFGrV~LVr~k~~g~yYAmKvL~k~~vVklKQveH~~nEk~vL~~v~~PFlv~l~~t~-----~d 115 (355)
T KOG0616|consen 41 YSLQDFERLKTLGTGSFGRVHLVREKHSGNYYAMKVLDKQKVVKLKQVEHTHNEKRVLKAVSHPFLVKLYGTF-----KD 115 (355)
T ss_pred cchhhhhheeeeccCccceEEEEEEccCCceeehhhcCHHHHHHHHHHHHHhhHHHHHhhccCceeEEEEEee-----cc
Confidence 34457999999999999999999999999999999886543 3344799999999999999999988 78
Q ss_pred ceEEEEEeeechhh-HHHHhhhhhhcCCCcCHHHHHHHHHHHHHHHHHHHhhCCcccCCCCCCceEEcCCCCcEEEeeec
Q 011138 207 ELYLNLVLEYISET-VYRVSKHYTRMNQHVPILYVQLYTYQICRALNYLHHVVGVCHRDIKPQNLLVNPHTHQLKICDFG 285 (492)
Q Consensus 207 ~~~~~lV~E~~~~~-l~~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~yLH~~~givHrDlKp~NILl~~~~~~vkL~DFG 285 (492)
..++||||||++|+ +... .+..+.|++..+++|+.||+.||+|||+ ++|++|||||||||+|.+| .+||+|||
T Consensus 116 ~~~lymvmeyv~GGElFS~----Lrk~~rF~e~~arFYAAeivlAleylH~-~~iiYRDLKPENiLlD~~G-~iKitDFG 189 (355)
T KOG0616|consen 116 NSNLYMVMEYVPGGELFSY----LRKSGRFSEPHARFYAAEIVLALEYLHS-LDIIYRDLKPENLLLDQNG-HIKITDFG 189 (355)
T ss_pred CCeEEEEEeccCCccHHHH----HHhcCCCCchhHHHHHHHHHHHHHHHHh-cCeeeccCChHHeeeccCC-cEEEEecc
Confidence 88899999999976 3333 3335789999999999999999999997 9999999999999999999 69999999
Q ss_pred CccccCCCCCCccceeccCccCchhhcCCCCCCcchhhHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCCHHHHh
Q 011138 286 SAKMLVPGEPNISYICSRYYRAPELIFGATEYTTAIDMWSIGCVLAELLLGQPLFPGESGVDQLVEIIKILGTPTREEIK 365 (492)
Q Consensus 286 ~a~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DvwSlGvil~ell~G~~pf~~~~~~~~~~~i~~~~g~p~~~~~~ 365 (492)
+|+.+. ....+.||||.|+|||++... .|+.++|+|||||++|||+.|.+||.+.+....+.+|+.
T Consensus 190 FAK~v~--~rT~TlCGTPeYLAPEii~sk-~ynkavDWWalGVLIYEMlaG~pPF~~~~~~~iY~KI~~----------- 255 (355)
T KOG0616|consen 190 FAKRVS--GRTWTLCGTPEYLAPEIIQSK-GYNKAVDWWALGVLIYEMLAGYPPFYDDNPIQIYEKILE----------- 255 (355)
T ss_pred ceEEec--CcEEEecCCccccChHHhhcC-CCCcchhHHHHHHHHHHHHcCCCCCcCCChHHHHHHHHh-----------
Confidence 999874 336789999999999999654 599999999999999999999999999999999999987
Q ss_pred hcCCCCcccCCCcccCCCcccccCCCCChhHhhhhccccccCCCCcC-----CHHHhhCCCCCCCCCC
Q 011138 366 CMNPNYTEFKFPQIKAHPWHKIFHKRMPPEALDLVSRLLQYSPSLRC-----TALEACAHPFFDDLRD 428 (492)
Q Consensus 366 ~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~Li~~~L~~dP~~R~-----t~~e~l~Hp~f~~~~~ 428 (492)
..++||. .++++++|||+++|+.|-.+|. ...+|.+||||+.+..
T Consensus 256 ------~~v~fP~------------~fs~~~kdLl~~LL~vD~t~R~gnlknG~~dIk~H~wF~~v~W 305 (355)
T KOG0616|consen 256 ------GKVKFPS------------YFSSDAKDLLKKLLQVDLTKRFGNLKNGVEDIKNHPWFKGVDW 305 (355)
T ss_pred ------CcccCCc------------ccCHHHHHHHHHHHhhhhHhhhcCcCCCccccccCcccccccH
Confidence 4555554 5899999999999999999995 5779999999998765
No 14
>KOG0581 consensus Mitogen-activated protein kinase kinase (MAP2K) [Signal transduction mechanisms]
Probab=100.00 E-value=2.7e-54 Score=410.76 Aligned_cols=258 Identities=31% Similarity=0.518 Sum_probs=213.0
Q ss_pred ceeEeeeeccCCceEEEEEEEcCCCCEEEEEEeccc-----hhhHHHHHHHHHHcCCCCccccceeeeeccCCCceEEEE
Q 011138 138 SYMAERVVGTGSFGVVFQAKCLETGDSVAIKKVLQD-----KRYKNRELQIMRLLNHPNVVSLKHCFFSTTEKDELYLNL 212 (492)
Q Consensus 138 ~y~~~~~lG~G~fg~Vy~~~~~~~g~~vAiK~~~~~-----~~~~~~E~~il~~l~h~nIv~l~~~~~~~~~~~~~~~~l 212 (492)
+.+....||+|..|+||+++++.|++.+|+|.+... .+...+|++|++.++|||||++|++|+.... .++|
T Consensus 80 dle~~~~lG~G~gG~V~kv~Hk~t~~i~AlK~I~~~~~~~~~~Qi~rEl~il~~~~spyIV~~ygaF~~~~~----~isI 155 (364)
T KOG0581|consen 80 DLERLGVLGSGNGGTVYKVRHKPTGKIYALKVILLNIDPALQKQILRELEILRSCQSPYIVGFYGAFYSNGE----EISI 155 (364)
T ss_pred HhhhhhhcccCCCcEEEEEEEcCCCeEEEEEeecccCCHHHHHHHHHHHHHHhhCCCCCeeeEeEEEEeCCc----eEEe
Confidence 456667899999999999999999999999999432 3445689999999999999999999976542 4889
Q ss_pred EeeechhhHHHHhhhhhhcCCCcCHHHHHHHHHHHHHHHHHHHhhCCcccCCCCCCceEEcCCCCcEEEeeecCccccCC
Q 011138 213 VLEYISETVYRVSKHYTRMNQHVPILYVQLYTYQICRALNYLHHVVGVCHRDIKPQNLLVNPHTHQLKICDFGSAKMLVP 292 (492)
Q Consensus 213 V~E~~~~~l~~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~yLH~~~givHrDlKp~NILl~~~~~~vkL~DFG~a~~~~~ 292 (492)
+||||+++.++.+.. ..+.+++.....++.+|++||.|||+.++||||||||+||||+..| +|||||||.++.+.+
T Consensus 156 ~mEYMDgGSLd~~~k---~~g~i~E~~L~~ia~~VL~GL~YLh~~~~IIHRDIKPsNlLvNskG-eVKicDFGVS~~lvn 231 (364)
T KOG0581|consen 156 CMEYMDGGSLDDILK---RVGRIPEPVLGKIARAVLRGLSYLHEERKIIHRDIKPSNLLVNSKG-EVKICDFGVSGILVN 231 (364)
T ss_pred ehhhcCCCCHHHHHh---hcCCCCHHHHHHHHHHHHHHHHHHhhccCeeeccCCHHHeeeccCC-CEEeccccccHHhhh
Confidence 999999876654332 2367999999999999999999999548999999999999999988 899999999998866
Q ss_pred CCCCccceeccCccCchhhcCCCCCCcchhhHHHHHHHHHHHhCCCCCCCC--ChHHHHHHHHHHhCCCCHHHHhhcCCC
Q 011138 293 GEPNISYICSRYYRAPELIFGATEYTTAIDMWSIGCVLAELLLGQPLFPGE--SGVDQLVEIIKILGTPTREEIKCMNPN 370 (492)
Q Consensus 293 ~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DvwSlGvil~ell~G~~pf~~~--~~~~~~~~i~~~~g~p~~~~~~~~~~~ 370 (492)
. ...+++||..|||||.+.+.. |+.++||||||++++||.+|+.||... .....+..+..+...|++.
T Consensus 232 S-~a~tfvGT~~YMsPERi~g~~-Ys~~sDIWSLGLsllE~a~GrfP~~~~~~~~~~~~~Ll~~Iv~~ppP~-------- 301 (364)
T KOG0581|consen 232 S-IANTFVGTSAYMSPERISGES-YSVKSDIWSLGLSLLELAIGRFPYPPPNPPYLDIFELLCAIVDEPPPR-------- 301 (364)
T ss_pred h-hcccccccccccChhhhcCCc-CCcccceecccHHHHHHhhCCCCCCCcCCCCCCHHHHHHHHhcCCCCC--------
Confidence 5 667899999999999997764 999999999999999999999999874 1222333333322222211
Q ss_pred CcccCCCcccCCCcccccCC-CCChhHhhhhccccccCCCCcCCHHHhhCCCCCCCCCCCC
Q 011138 371 YTEFKFPQIKAHPWHKIFHK-RMPPEALDLVSRLLQYSPSLRCTALEACAHPFFDDLRDPN 430 (492)
Q Consensus 371 ~~~~~~~~~~~~~~~~~~~~-~~s~~~~~Li~~~L~~dP~~R~t~~e~l~Hp~f~~~~~~~ 430 (492)
++. ..|+++++||..||++||.+|+++.|+++|||+++...++
T Consensus 302 -----------------lP~~~fS~ef~~FV~~CL~Kdp~~R~s~~qLl~Hpfi~~~~~~~ 345 (364)
T KOG0581|consen 302 -----------------LPEGEFSPEFRSFVSCCLRKDPSERPSAKQLLQHPFIKKFEDPN 345 (364)
T ss_pred -----------------CCcccCCHHHHHHHHHHhcCCcccCCCHHHHhcCHHHhhccccc
Confidence 122 2799999999999999999999999999999999876543
No 15
>KOG0594 consensus Protein kinase PCTAIRE and related kinases [General function prediction only]
Probab=100.00 E-value=2e-53 Score=404.48 Aligned_cols=290 Identities=34% Similarity=0.690 Sum_probs=243.9
Q ss_pred cceeEeeeeccCCceEEEEEEEcCCCCEEEEEEeccchh------hHHHHHHHHHHcCCCC-ccccceeeeeccC-CCce
Q 011138 137 ISYMAERVVGTGSFGVVFQAKCLETGDSVAIKKVLQDKR------YKNRELQIMRLLNHPN-VVSLKHCFFSTTE-KDEL 208 (492)
Q Consensus 137 ~~y~~~~~lG~G~fg~Vy~~~~~~~g~~vAiK~~~~~~~------~~~~E~~il~~l~h~n-Iv~l~~~~~~~~~-~~~~ 208 (492)
..|...++||+|+||+||+|+.+.+|+.||+|++.-+.. ...||+.+|+.|+|+| ||.|++++..... ....
T Consensus 11 ~~~~~~eklGeGtyg~Vykar~~~~g~~VALKkirl~~~~EG~P~taiREisllk~L~~~~~iv~L~dv~~~~~~~~~~~ 90 (323)
T KOG0594|consen 11 FDYEKVEKLGEGTYGVVYKARSKRTGKFVALKKIRLEFEEEGVPSTAIREISLLKRLSHANHIVRLHDVIHTSNNHRGIG 90 (323)
T ss_pred HHHHHHHHhCCCCceEEEEEEEecCCCEEEEEEEeccccccCCCchhhHHHHHHHHhCCCcceEEEEeeeeecccccccc
Confidence 358888889999999999999999999999999865432 3468999999999999 9999999865442 2334
Q ss_pred EEEEEeeechhhHHHHhhhhhhcCCCcCHHHHHHHHHHHHHHHHHHHhhCCcccCCCCCCceEEcCCCCcEEEeeecCcc
Q 011138 209 YLNLVLEYISETVYRVSKHYTRMNQHVPILYVQLYTYQICRALNYLHHVVGVCHRDIKPQNLLVNPHTHQLKICDFGSAK 288 (492)
Q Consensus 209 ~~~lV~E~~~~~l~~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~yLH~~~givHrDlKp~NILl~~~~~~vkL~DFG~a~ 288 (492)
.+++|+||+.-++...+.......+.++...++.+++||+.||+|||+ +||+||||||+||||++++ .+||+|||+|+
T Consensus 91 ~l~lvfe~~d~DL~~ymd~~~~~~~g~~~~~ik~~m~Qll~gl~~~H~-~~IlHRDLKPQNlLi~~~G-~lKlaDFGlAr 168 (323)
T KOG0594|consen 91 KLYLVFEFLDRDLKKYMDSLPKKPQGLPPRLIKSFMRQLLRGLAFLHS-HGILHRDLKPQNLLISSSG-VLKLADFGLAR 168 (323)
T ss_pred eEEEEEEeecccHHHHHHhccccccCCCHHHHHHHHHHHHHHHHHHHh-CCeecccCCcceEEECCCC-cEeeeccchHH
Confidence 689999999988877766544333567778999999999999999997 9999999999999999987 89999999998
Q ss_pred ccC-CCCCCccceeccCccCchhhcCCCCCCcchhhHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCCHHHHhhc
Q 011138 289 MLV-PGEPNISYICSRYYRAPELIFGATEYTTAIDMWSIGCVLAELLLGQPLFPGESGVDQLVEIIKILGTPTREEIKCM 367 (492)
Q Consensus 289 ~~~-~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DvwSlGvil~ell~G~~pf~~~~~~~~~~~i~~~~g~p~~~~~~~~ 367 (492)
... +....+..++|.+|+|||++.|...|+..+||||+|||++||+++++.|++.++.+++..|++.+|+|..+.|+..
T Consensus 169 a~~ip~~~yt~evvTlWYRaPEvLlGs~~Ys~~vDiWs~GcIfaEm~~~~~LFpG~se~~ql~~If~~lGtP~e~~Wp~v 248 (323)
T KOG0594|consen 169 AFSIPMRTYTPEVVTLWYRAPEVLLGSTSYSTSVDIWSLGCIFAEMFTRRPLFPGDSEIDQLFRIFRLLGTPNEKDWPGV 248 (323)
T ss_pred HhcCCcccccccEEEeeccCHHHhcCCCcCCCCcchHhHHHHHHHHHhCCCCCCCCcHHHHHHHHHHHcCCCCccCCCCc
Confidence 765 4555677899999999999999988999999999999999999999999999999999999999999999988754
Q ss_pred C--CCCcccCCCccc-CCCcccccCCCCChhHhhhhccccccCCCCcCCHHHhhCCCCCCCCCCCC
Q 011138 368 N--PNYTEFKFPQIK-AHPWHKIFHKRMPPEALDLVSRLLQYSPSLRCTALEACAHPFFDDLRDPN 430 (492)
Q Consensus 368 ~--~~~~~~~~~~~~-~~~~~~~~~~~~s~~~~~Li~~~L~~dP~~R~t~~e~l~Hp~f~~~~~~~ 430 (492)
. +.|.. .|+... ...+.... +...+++.+|+.+||++||.+|+|+..+|.||||..+..+.
T Consensus 249 ~~~~~~k~-~f~~~~~~~~l~~~~-~~~~~~~~dll~~~L~y~p~~R~Sa~~al~h~yf~~~~~~~ 312 (323)
T KOG0594|consen 249 SSLPDYKA-PFPKWPGPKDLSSIL-PKLDPDGIELLSKLLQYDPAKRISAKGALTHPYFSELPEKS 312 (323)
T ss_pred cccccccc-cCcCCCCccchHHhc-cccCccHHHHHHHHhccCcccCcCHHHHhcChhhcccccch
Confidence 3 33332 344433 22233322 34457999999999999999999999999999999886543
No 16
>KOG0033 consensus Ca2+/calmodulin-dependent protein kinase, EF-Hand protein superfamily [Signal transduction mechanisms]
Probab=100.00 E-value=3.2e-56 Score=399.68 Aligned_cols=288 Identities=28% Similarity=0.417 Sum_probs=242.1
Q ss_pred cccceeEeeeeccCCceEEEEEEEcCCCCEEEEEEec------cchhhHHHHHHHHHHcCCCCccccceeeeeccCCCce
Q 011138 135 QTISYMAERVVGTGSFGVVFQAKCLETGDSVAIKKVL------QDKRYKNRELQIMRLLNHPNVVSLKHCFFSTTEKDEL 208 (492)
Q Consensus 135 ~~~~y~~~~~lG~G~fg~Vy~~~~~~~g~~vAiK~~~------~~~~~~~~E~~il~~l~h~nIv~l~~~~~~~~~~~~~ 208 (492)
..+.|.+.++||+|.|+.||++.+..+|+.+|+|++. .+.+.+++|+.|.+.|+|||||+|++.+ ....
T Consensus 9 f~d~y~l~e~igkG~FSvVrRc~~~~tg~~fa~kiin~~k~~~~~~e~l~rEarIC~~LqHP~IvrL~~ti-----~~~~ 83 (355)
T KOG0033|consen 9 FSDNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKLQHPNIVRLHDSI-----QEES 83 (355)
T ss_pred cchhhhHHHHHccCchHHHHHHHhccchHHHHHHHhhhhhhccccHHHHHHHHHHHHhcCCCcEeehhhhh-----cccc
Confidence 3456999999999999999999999999999999873 2345677999999999999999999988 6677
Q ss_pred EEEEEeeechhh-HHHHhhhhhhcCCCcCHHHHHHHHHHHHHHHHHHHhhCCcccCCCCCCceEEcCC--CCcEEEeeec
Q 011138 209 YLNLVLEYISET-VYRVSKHYTRMNQHVPILYVQLYTYQICRALNYLHHVVGVCHRDIKPQNLLVNPH--THQLKICDFG 285 (492)
Q Consensus 209 ~~~lV~E~~~~~-l~~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~yLH~~~givHrDlKp~NILl~~~--~~~vkL~DFG 285 (492)
+.|||+|++.|+ +...+-. ..-+++..+..+++||+.||.|+|. +||||||+||+|+|+-+. +.-+||+|||
T Consensus 84 ~~ylvFe~m~G~dl~~eIV~----R~~ySEa~aSH~~rQiLeal~yCH~-n~IvHRDvkP~nllLASK~~~A~vKL~~FG 158 (355)
T KOG0033|consen 84 FHYLVFDLVTGGELFEDIVA----REFYSEADASHCIQQILEALAYCHS-NGIVHRDLKPENLLLASKAKGAAVKLADFG 158 (355)
T ss_pred eeEEEEecccchHHHHHHHH----HHHHHHHHHHHHHHHHHHHHHHHHh-cCceeccCChhheeeeeccCCCceeecccc
Confidence 899999999975 3322222 1346788899999999999999997 999999999999999433 3369999999
Q ss_pred CccccCCCCCCccceeccCccCchhhcCCCCCCcchhhHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCCHHHHh
Q 011138 286 SAKMLVPGEPNISYICSRYYRAPELIFGATEYTTAIDMWSIGCVLAELLLGQPLFPGESGVDQLVEIIKILGTPTREEIK 365 (492)
Q Consensus 286 ~a~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DvwSlGvil~ell~G~~pf~~~~~~~~~~~i~~~~g~p~~~~~~ 365 (492)
+|..+..+......+|||.|||||++.. ..|+..+|||+.|||||.||.|.+||++.+....+..|++
T Consensus 159 vAi~l~~g~~~~G~~GtP~fmaPEvvrk-dpy~kpvDiW~cGViLfiLL~G~~PF~~~~~~rlye~I~~----------- 226 (355)
T KOG0033|consen 159 LAIEVNDGEAWHGFAGTPGYLSPEVLKK-DPYSKPVDIWACGVILYILLVGYPPFWDEDQHRLYEQIKA----------- 226 (355)
T ss_pred eEEEeCCccccccccCCCcccCHHHhhc-CCCCCcchhhhhhHHHHHHHhCCCCCCCccHHHHHHHHhc-----------
Confidence 9999887777778899999999999965 4599999999999999999999999999998888888877
Q ss_pred hcCCCCcccCCCcccCCCcccccCCCCChhHhhhhccccccCCCCcCCHHHhhCCCCCCCCCCCCCCCCCCCCCCCCCCC
Q 011138 366 CMNPNYTEFKFPQIKAHPWHKIFHKRMPPEALDLVSRLLQYSPSLRCTALEACAHPFFDDLRDPNTCLPNGRPLPTLFNF 445 (492)
Q Consensus 366 ~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~Li~~~L~~dP~~R~t~~e~l~Hp~f~~~~~~~~~~~~~~~~~~~~~~ 445 (492)
..+++|. ..++++++++++||++||..||.+|+|+.|+|+|||+.+-..-.........+..|+.|
T Consensus 227 ------g~yd~~~--------~~w~~is~~Ak~LvrrML~~dP~kRIta~EAL~HpWi~~r~~~As~~H~~dtvd~lrkf 292 (355)
T KOG0033|consen 227 ------GAYDYPS--------PEWDTVTPEAKSLIRRMLTVNPKKRITADEALKHPWICNRERVASAIHRQDTVDCLKKF 292 (355)
T ss_pred ------cccCCCC--------cccCcCCHHHHHHHHHHhccChhhhccHHHHhCCchhcchHHHHHHhhhHHHHHHHHHh
Confidence 3444443 24467999999999999999999999999999999999765555556666778888888
Q ss_pred Ccccccccccccc
Q 011138 446 TAQGKLILCFSYF 458 (492)
Q Consensus 446 ~~~~~~~~~~~~~ 458 (492)
....|+.-+.+-.
T Consensus 293 NarRKLKgavLta 305 (355)
T KOG0033|consen 293 NARRKLKGAILTT 305 (355)
T ss_pred hHHHHHHHHHHHH
Confidence 8888776555433
No 17
>KOG0605 consensus NDR and related serine/threonine kinases [General function prediction only]
Probab=100.00 E-value=5.6e-53 Score=417.13 Aligned_cols=257 Identities=31% Similarity=0.525 Sum_probs=218.5
Q ss_pred cccceeEeeeeccCCceEEEEEEEcCCCCEEEEEEeccchhh-------HHHHHHHHHHcCCCCccccceeeeeccCCCc
Q 011138 135 QTISYMAERVVGTGSFGVVFQAKCLETGDSVAIKKVLQDKRY-------KNRELQIMRLLNHPNVVSLKHCFFSTTEKDE 207 (492)
Q Consensus 135 ~~~~y~~~~~lG~G~fg~Vy~~~~~~~g~~vAiK~~~~~~~~-------~~~E~~il~~l~h~nIv~l~~~~~~~~~~~~ 207 (492)
...+|.++..||+|+||.||+|+.+.||..+|+|++.+.... ...|..||...++|+||+||..| +|.
T Consensus 139 ~~~DFe~Lk~IgkGAfGeVrLarKk~Tg~iyAmK~LkKS~M~~~~Qv~hV~aERdiL~~~ds~~vVKLyYsF-----QD~ 213 (550)
T KOG0605|consen 139 SLDDFELLKVIGKGAFGEVRLARKKDTGEIYAMKILKKSEMLKKNQVEHVRAERDILAEVDSPWVVKLYYSF-----QDK 213 (550)
T ss_pred CcccchhheeeccccceeEEEEEEccCCcEEeeecccHHHHHhhhhHHHHHHHHHHhhhcCCCcEEEEEEEe-----cCC
Confidence 456799999999999999999999999999999999775432 34699999999999999999999 888
Q ss_pred eEEEEEeeechhh-HHHHhhhhhhcCCCcCHHHHHHHHHHHHHHHHHHHhhCCcccCCCCCCceEEcCCCCcEEEeeecC
Q 011138 208 LYLNLVLEYISET-VYRVSKHYTRMNQHVPILYVQLYTYQICRALNYLHHVVGVCHRDIKPQNLLVNPHTHQLKICDFGS 286 (492)
Q Consensus 208 ~~~~lV~E~~~~~-l~~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~yLH~~~givHrDlKp~NILl~~~~~~vkL~DFG~ 286 (492)
.++||||||++|| +-.++. ....+++..+++|+.+++.|++.||+ .|||||||||+|+|||..| .+||+|||+
T Consensus 214 ~~LYLiMEylPGGD~mTLL~----~~~~L~e~~arfYiaE~vlAI~~iH~-~gyIHRDIKPdNlLiD~~G-HiKLSDFGL 287 (550)
T KOG0605|consen 214 EYLYLIMEYLPGGDMMTLLM----RKDTLTEDWARFYIAETVLAIESIHQ-LGYIHRDIKPDNLLIDAKG-HIKLSDFGL 287 (550)
T ss_pred CeeEEEEEecCCccHHHHHH----hcCcCchHHHHHHHHHHHHHHHHHHH-cCcccccCChhheeecCCC-CEeeccccc
Confidence 8999999999976 333332 25679999999999999999999998 9999999999999999999 599999999
Q ss_pred ccccCC-----------------------CCC-----C--------------------ccceeccCccCchhhcCCCCCC
Q 011138 287 AKMLVP-----------------------GEP-----N--------------------ISYICSRYYRAPELIFGATEYT 318 (492)
Q Consensus 287 a~~~~~-----------------------~~~-----~--------------------~~~~gt~~y~aPE~~~~~~~~~ 318 (492)
++.+.. ... . .+.+|||.|||||++.+.+ |+
T Consensus 288 s~gl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~~nrr~~a~StVGTPDYiAPEVll~kg-Y~ 366 (550)
T KOG0605|consen 288 STGLDKKHRIESYRLDEQMQINLSEAKPSDFPKFNTPRSTMSRREQLQTWKRNRRQLAYSTVGTPDYIAPEVLLGKG-YG 366 (550)
T ss_pred cchhhhhhhhhhhcchhhhhhhhccCCCccccccccccchhhHHHHHHHHHhhhhhhhhcccCCccccchHHHhcCC-CC
Confidence 843211 000 0 1468999999999998876 99
Q ss_pred cchhhHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCCHHHHhhcCCCCcccCCCcccCCCcccccCCCCChhHhh
Q 011138 319 TAIDMWSIGCVLAELLLGQPLFPGESGVDQLVEIIKILGTPTREEIKCMNPNYTEFKFPQIKAHPWHKIFHKRMPPEALD 398 (492)
Q Consensus 319 ~~~DvwSlGvil~ell~G~~pf~~~~~~~~~~~i~~~~g~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~ 398 (492)
..+|+||||||+||||.|.+||.+.+..+...+|+... ..+.||.- ..++++++|
T Consensus 367 ~~cDwWSLG~ImyEmLvGyPPF~s~tp~~T~rkI~nwr---------------~~l~fP~~----------~~~s~eA~D 421 (550)
T KOG0605|consen 367 KECDWWSLGCIMYEMLVGYPPFCSETPQETYRKIVNWR---------------ETLKFPEE----------VDLSDEAKD 421 (550)
T ss_pred ccccHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHh---------------hhccCCCc----------CcccHHHHH
Confidence 99999999999999999999999999999999987721 22344431 346899999
Q ss_pred hhccccccCCCCcCC---HHHhhCCCCCCCCCCC
Q 011138 399 LVSRLLQYSPSLRCT---ALEACAHPFFDDLRDP 429 (492)
Q Consensus 399 Li~~~L~~dP~~R~t---~~e~l~Hp~f~~~~~~ 429 (492)
||.+||. ||.+|+. ++||.+||||+.+...
T Consensus 422 LI~rll~-d~~~RLG~~G~~EIK~HPfF~~v~W~ 454 (550)
T KOG0605|consen 422 LITRLLC-DPENRLGSKGAEEIKKHPFFKGVDWD 454 (550)
T ss_pred HHHHHhc-CHHHhcCcccHHHHhcCCccccCCcc
Confidence 9999999 9999995 8999999999988764
No 18
>KOG0588 consensus Serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]
Probab=100.00 E-value=5.3e-53 Score=424.86 Aligned_cols=253 Identities=33% Similarity=0.523 Sum_probs=226.1
Q ss_pred ceeEeeeeccCCceEEEEEEEcCCCCEEEEEEeccc-------hhhHHHHHHHHHHcCCCCccccceeeeeccCCCceEE
Q 011138 138 SYMAERVVGTGSFGVVFQAKCLETGDSVAIKKVLQD-------KRYKNRELQIMRLLNHPNVVSLKHCFFSTTEKDELYL 210 (492)
Q Consensus 138 ~y~~~~~lG~G~fg~Vy~~~~~~~g~~vAiK~~~~~-------~~~~~~E~~il~~l~h~nIv~l~~~~~~~~~~~~~~~ 210 (492)
-|.+++.||.|+-|.|.+|++..||+.+|||++.+. ....++|+-||+.+.||||+++|+++ ++..++
T Consensus 13 pwkLgkTLG~Gstg~vrlakh~~TGqlaaiKii~k~~~~s~s~~~~IerEIviMkLi~HpnVl~LydVw-----e~~~~l 87 (786)
T KOG0588|consen 13 PWKLGKTLGKGSTGCVRLAKHAETGQLAAIKIIPKRSELSSSQPAGIEREIVIMKLIEHPNVLRLYDVW-----ENKQHL 87 (786)
T ss_pred ceeccccccCCCCceehhhhcccccceeEEEeeccccccccccccchhhhhHHHHHhcCCCeeeeeeee-----ccCceE
Confidence 499999999999999999999999999999999765 34567999999999999999999999 666679
Q ss_pred EEEeeechhh-HHHHhhhhhhcCCCcCHHHHHHHHHHHHHHHHHHHhhCCcccCCCCCCceEEcCCCCcEEEeeecCccc
Q 011138 211 NLVLEYISET-VYRVSKHYTRMNQHVPILYVQLYTYQICRALNYLHHVVGVCHRDIKPQNLLVNPHTHQLKICDFGSAKM 289 (492)
Q Consensus 211 ~lV~E~~~~~-l~~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~yLH~~~givHrDlKp~NILl~~~~~~vkL~DFG~a~~ 289 (492)
|+|+||++|| |++.+ ...+.+++.+++.+++||+.|+.|+|. .+|+||||||+|+|+|.++ +|||+|||+|..
T Consensus 88 ylvlEyv~gGELFdyl----v~kG~l~e~eaa~ff~QIi~gv~yCH~-~~icHRDLKpENlLLd~~~-nIKIADFGMAsL 161 (786)
T KOG0588|consen 88 YLVLEYVPGGELFDYL----VRKGPLPEREAAHFFRQILDGVSYCHA-FNICHRDLKPENLLLDVKN-NIKIADFGMASL 161 (786)
T ss_pred EEEEEecCCchhHHHH----HhhCCCCCHHHHHHHHHHHHHHHHHhh-hcceeccCCchhhhhhccc-CEeeeccceeec
Confidence 9999999864 44433 335789999999999999999999997 8999999999999999888 699999999998
Q ss_pred cCCCCCCccceeccCccCchhhcCCCCCCcchhhHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCCHHHHhhcCC
Q 011138 290 LVPGEPNISYICSRYYRAPELIFGATEYTTAIDMWSIGCVLAELLLGQPLFPGESGVDQLVEIIKILGTPTREEIKCMNP 369 (492)
Q Consensus 290 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DvwSlGvil~ell~G~~pf~~~~~~~~~~~i~~~~g~p~~~~~~~~~~ 369 (492)
-.++.-..+.||+|+|.|||++.|..+.+.++||||+|||||.||+|+.||++++....+.++.+
T Consensus 162 e~~gklLeTSCGSPHYA~PEIV~G~pYdG~~sDVWSCGVILfALLtG~LPFdDdNir~LLlKV~~--------------- 226 (786)
T KOG0588|consen 162 EVPGKLLETSCGSPHYAAPEIVSGRPYDGRPSDVWSCGVILFALLTGKLPFDDDNIRVLLLKVQR--------------- 226 (786)
T ss_pred ccCCccccccCCCcccCCchhhcCCCCCCCccccchhHHHHHHHHhCCCCCCCccHHHHHHHHHc---------------
Confidence 88888888999999999999999999889999999999999999999999998887777777755
Q ss_pred CCcccCCCcccCCCcccccCCCCChhHhhhhccccccCCCCcCCHHHhhCCCCCCCCCCCC
Q 011138 370 NYTEFKFPQIKAHPWHKIFHKRMPPEALDLVSRLLQYSPSLRCTALEACAHPFFDDLRDPN 430 (492)
Q Consensus 370 ~~~~~~~~~~~~~~~~~~~~~~~s~~~~~Li~~~L~~dP~~R~t~~e~l~Hp~f~~~~~~~ 430 (492)
..|..| ..++.++++||.+||++||++|+|..||+.|||+.......
T Consensus 227 --G~f~MP------------s~Is~eaQdLLr~ml~VDp~~RiT~~eI~kHP~l~g~~~~~ 273 (786)
T KOG0588|consen 227 --GVFEMP------------SNISSEAQDLLRRMLDVDPSTRITTEEILKHPFLSGYTSLP 273 (786)
T ss_pred --CcccCC------------CcCCHHHHHHHHHHhccCccccccHHHHhhCchhhcCCCCC
Confidence 233333 46899999999999999999999999999999999877643
No 19
>KOG0610 consensus Putative serine/threonine protein kinase [General function prediction only]
Probab=100.00 E-value=2.2e-52 Score=400.80 Aligned_cols=259 Identities=28% Similarity=0.469 Sum_probs=223.3
Q ss_pred cccceeEeeeeccCCceEEEEEEEcCCCCEEEEEEeccchh-------hHHHHHHHHHHcCCCCccccceeeeeccCCCc
Q 011138 135 QTISYMAERVVGTGSFGVVFQAKCLETGDSVAIKKVLQDKR-------YKNRELQIMRLLNHPNVVSLKHCFFSTTEKDE 207 (492)
Q Consensus 135 ~~~~y~~~~~lG~G~fg~Vy~~~~~~~g~~vAiK~~~~~~~-------~~~~E~~il~~l~h~nIv~l~~~~~~~~~~~~ 207 (492)
....|++.+.||.|.-|+||+|+...++..+|+|++.+... ..+.|.+||..++||.++.||+.| +.+
T Consensus 75 ~l~~f~llk~LG~GdiG~VyL~~l~~t~~~fAmKVmdK~~l~~rkKl~Ra~tE~eIL~~lDHPFlPTLYa~f-----et~ 149 (459)
T KOG0610|consen 75 GLRHFRLLKRLGCGDIGTVYLVELRGTNCLFAMKVMDKESLASRKKLKRAQTEREILSLLDHPFLPTLYASF-----ETD 149 (459)
T ss_pred CHHHHHHHHHcCCCCceeEEEEEecCCCceEEEEEecHHHHhhhhHHHHHHHHHHHHHhcCCCccchhhhee-----ecc
Confidence 34469999999999999999999999999999999965432 234699999999999999999999 777
Q ss_pred eEEEEEeeechhhHHHHhhhhhhcCCCcCHHHHHHHHHHHHHHHHHHHhhCCcccCCCCCCceEEcCCCCcEEEeeecCc
Q 011138 208 LYLNLVLEYISETVYRVSKHYTRMNQHVPILYVQLYTYQICRALNYLHHVVGVCHRDIKPQNLLVNPHTHQLKICDFGSA 287 (492)
Q Consensus 208 ~~~~lV~E~~~~~l~~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~yLH~~~givHrDlKp~NILl~~~~~~vkL~DFG~a 287 (492)
.|.|+|||||+|+-+..+.+ .+.++.+++..+++|+.+|+.||+||| +.|||+||||||||||.++| .|.|+||.++
T Consensus 150 ~~~cl~meyCpGGdL~~Lrq-kQp~~~fse~~aRFYaAEvl~ALEYLH-mlGivYRDLKPENILvredG-HIMLsDFDLS 226 (459)
T KOG0610|consen 150 KYSCLVMEYCPGGDLHSLRQ-KQPGKRFSESAARFYAAEVLLALEYLH-MLGIVYRDLKPENILVREDG-HIMLSDFDLS 226 (459)
T ss_pred ceeEEEEecCCCccHHHHHh-hCCCCccchhhHHHHHHHHHHHHHHHH-hhceeeccCCcceeEEecCC-cEEeeecccc
Confidence 78999999999876655444 455788999999999999999999999 59999999999999999999 5999999986
Q ss_pred cccC----------------------------------C-----------------------CCCCccceeccCccCchh
Q 011138 288 KMLV----------------------------------P-----------------------GEPNISYICSRYYRAPEL 310 (492)
Q Consensus 288 ~~~~----------------------------------~-----------------------~~~~~~~~gt~~y~aPE~ 310 (492)
.... . +....+++||-.|+|||+
T Consensus 227 ~~~~~~Pt~~~s~~~~~~~~~~~~~~~~~s~f~~r~~~~~~~~~k~~~~~~~~~p~~~aep~~~RSnSFVGThEYlAPEv 306 (459)
T KOG0610|consen 227 LRCPVSPTLVKSSSPRSSGSQPSCRSRQPSCFSPRCLSSSKKRKKKDESASRSLPELVAEPTGARSNSFVGTHEYLAPEV 306 (459)
T ss_pred ccCCCCCeeeccCCCCCCCCCcccccccccccccchhccccccccccccccccchhhhcCCCCcccccccccccccccee
Confidence 3220 0 011235789999999999
Q ss_pred hcCCCCCCcchhhHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCCHHHHhhcCCCCcccCCCcccCCCcccccCC
Q 011138 311 IFGATEYTTAIDMWSIGCVLAELLLGQPLFPGESGVDQLVEIIKILGTPTREEIKCMNPNYTEFKFPQIKAHPWHKIFHK 390 (492)
Q Consensus 311 ~~~~~~~~~~~DvwSlGvil~ell~G~~pf~~~~~~~~~~~i~~~~g~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 390 (492)
|.|.+ .+.++|||+|||++||||.|..||.|.+..+.+.+|+. .+.+||.. +
T Consensus 307 I~G~G-HgsAVDWWtfGIflYEmLyG~TPFKG~~~~~Tl~NIv~-----------------~~l~Fp~~----------~ 358 (459)
T KOG0610|consen 307 IRGEG-HGSAVDWWTFGIFLYEMLYGTTPFKGSNNKETLRNIVG-----------------QPLKFPEE----------P 358 (459)
T ss_pred eecCC-CCchhhHHHHHHHHHHHHhCCCCcCCCCchhhHHHHhc-----------------CCCcCCCC----------C
Confidence 98876 79999999999999999999999999999999999876 45666653 2
Q ss_pred CCChhHhhhhccccccCCCCcCC----HHHhhCCCCCCCCCCC
Q 011138 391 RMPPEALDLVSRLLQYSPSLRCT----ALEACAHPFFDDLRDP 429 (492)
Q Consensus 391 ~~s~~~~~Li~~~L~~dP~~R~t----~~e~l~Hp~f~~~~~~ 429 (492)
.++..++|||+++|.+||.+|+. |.||.+||||+.+...
T Consensus 359 ~vs~~akDLIr~LLvKdP~kRlg~~rGA~eIK~HpFF~gVnWa 401 (459)
T KOG0610|consen 359 EVSSAAKDLIRKLLVKDPSKRLGSKRGAAEIKRHPFFEGVNWA 401 (459)
T ss_pred cchhHHHHHHHHHhccChhhhhccccchHHhhcCccccCCChh
Confidence 57899999999999999999998 9999999999998875
No 20
>KOG0667 consensus Dual-specificity tyrosine-phosphorylation regulated kinase [General function prediction only]
Probab=100.00 E-value=3.5e-52 Score=422.02 Aligned_cols=280 Identities=37% Similarity=0.623 Sum_probs=231.6
Q ss_pred ceeEeeeeccCCceEEEEEEEcCCCCEEEEEEeccchhhHH---HHHHHHHHcC-C-----CCccccceeeeeccCCCce
Q 011138 138 SYMAERVVGTGSFGVVFQAKCLETGDSVAIKKVLQDKRYKN---RELQIMRLLN-H-----PNVVSLKHCFFSTTEKDEL 208 (492)
Q Consensus 138 ~y~~~~~lG~G~fg~Vy~~~~~~~g~~vAiK~~~~~~~~~~---~E~~il~~l~-h-----~nIv~l~~~~~~~~~~~~~ 208 (492)
+|.+.++||+|+||.|.+|.+..|++.||||+++....+.+ .|+.||..|+ | -|||+++++| ....
T Consensus 187 rY~V~e~LGkGtFGQVvk~~d~~T~e~VAIKIiKN~k~f~~Q~~~Ei~iL~~ln~~d~~~~~n~Vrm~d~F-----~fr~ 261 (586)
T KOG0667|consen 187 RYEVLEVLGKGSFGQVVKAYDHKTGEIVAIKIIKNKKRFLRQAQIEIRILELLNKHDPDDKYNIVRMLDYF-----YFRN 261 (586)
T ss_pred EEEEEEEecccccceeEEEEecCCCcEEEEEeeccChHHHHHHHHHHHHHHHHhccCCCCCeeEEEeeecc-----cccc
Confidence 69999999999999999999999999999999988876654 5899999987 3 4899999999 5555
Q ss_pred EEEEEeeechhhHHHHhhhhhhcCCCcCHHHHHHHHHHHHHHHHHHHhhCCcccCCCCCCceEEcC-CCCcEEEeeecCc
Q 011138 209 YLNLVLEYISETVYRVSKHYTRMNQHVPILYVQLYTYQICRALNYLHHVVGVCHRDIKPQNLLVNP-HTHQLKICDFGSA 287 (492)
Q Consensus 209 ~~~lV~E~~~~~l~~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~yLH~~~givHrDlKp~NILl~~-~~~~vkL~DFG~a 287 (492)
++|||+|.++.+|+++++... ...++...++.++.||+.||.+||+ .||||+|||||||||.. +...|||+|||+|
T Consensus 262 HlciVfELL~~NLYellK~n~--f~Glsl~~ir~~~~Qil~~L~~L~~-l~IIHcDLKPENILL~~~~r~~vKVIDFGSS 338 (586)
T KOG0667|consen 262 HLCIVFELLSTNLYELLKNNK--FRGLSLPLVRKFAQQILTALLFLHE-LGIIHCDLKPENILLKDPKRSRIKVIDFGSS 338 (586)
T ss_pred ceeeeehhhhhhHHHHHHhcC--CCCCCHHHHHHHHHHHHHHHHHHHh-CCeeeccCChhheeeccCCcCceeEEecccc
Confidence 699999999999999987644 3569999999999999999999997 89999999999999953 3347999999999
Q ss_pred cccCCCCCCccceeccCccCchhhcCCCCCCcchhhHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCCHHHHhhc
Q 011138 288 KMLVPGEPNISYICSRYYRAPELIFGATEYTTAIDMWSIGCVLAELLLGQPLFPGESGVDQLVEIIKILGTPTREEIKCM 367 (492)
Q Consensus 288 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DvwSlGvil~ell~G~~pf~~~~~~~~~~~i~~~~g~p~~~~~~~~ 367 (492)
... .....+++.++.|+|||+|+|.. |+.+.||||||||++||++|.+.|+|.+..+++..|+.++|.|+...+...
T Consensus 339 c~~--~q~vytYiQSRfYRAPEVILGlp-Y~~~IDmWSLGCIlAEL~tG~PLfpG~ne~DQl~~I~e~lG~Pp~~mL~~~ 415 (586)
T KOG0667|consen 339 CFE--SQRVYTYIQSRFYRAPEVILGLP-YDTAIDMWSLGCILAELFTGEPLFPGDNEYDQLARIIEVLGLPPPKMLDTA 415 (586)
T ss_pred ccc--CCcceeeeeccccccchhhccCC-CCCccceeehhhhHHhHhcCccccCCCCHHHHHHHHHHHhCCCCHHHHHhc
Confidence 865 33334899999999999999865 999999999999999999999999999999999999999999998877543
Q ss_pred CCCC---cc-cCCCc-----------------------------c-cCCCcccccCCCCChhHhhhhccccccCCCCcCC
Q 011138 368 NPNY---TE-FKFPQ-----------------------------I-KAHPWHKIFHKRMPPEALDLVSRLLQYSPSLRCT 413 (492)
Q Consensus 368 ~~~~---~~-~~~~~-----------------------------~-~~~~~~~~~~~~~s~~~~~Li~~~L~~dP~~R~t 413 (492)
.... .. .-++. . ....|...+...-...+.|||++||++||.+|+|
T Consensus 416 ~~~~kff~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~P~~~~~l~~~~~~~~~~~F~dflk~~L~~dP~~R~t 495 (586)
T KOG0667|consen 416 KKAHKFFTSLKGFPRLCVETSAPRGTKSPEVRKYYRKARLERRGPPGSRSLESGLPKADDKLFIDFLKRCLEWDPAERIT 495 (586)
T ss_pred cccceehhccCCceeeeeeecccccccchhhhhhhhhhcccccCCCCCcccchhcccccHHHHHHHHHHHhccCchhcCC
Confidence 2111 11 00000 0 1112222222233346799999999999999999
Q ss_pred HHHhhCCCCCCCCCC
Q 011138 414 ALEACAHPFFDDLRD 428 (492)
Q Consensus 414 ~~e~l~Hp~f~~~~~ 428 (492)
+.|+|+||||+....
T Consensus 496 p~qal~Hpfl~~~~~ 510 (586)
T KOG0667|consen 496 PAQALNHPFLTGTSL 510 (586)
T ss_pred HHHHhcCcccccccc
Confidence 999999999996554
No 21
>KOG0595 consensus Serine/threonine-protein kinase involved in autophagy [Posttranslational modification, protein turnover, chaperones; Intracellular trafficking, secretion, and vesicular transport; Signal transduction mechanisms]
Probab=100.00 E-value=3e-52 Score=399.93 Aligned_cols=255 Identities=33% Similarity=0.556 Sum_probs=216.2
Q ss_pred ccceeEeeeeccCCceEEEEEEEcCCCCEEEEEEeccch------hhHHHHHHHHHHcCCCCccccceeeeeccCCCceE
Q 011138 136 TISYMAERVVGTGSFGVVFQAKCLETGDSVAIKKVLQDK------RYKNRELQIMRLLNHPNVVSLKHCFFSTTEKDELY 209 (492)
Q Consensus 136 ~~~y~~~~~lG~G~fg~Vy~~~~~~~g~~vAiK~~~~~~------~~~~~E~~il~~l~h~nIv~l~~~~~~~~~~~~~~ 209 (492)
..+|.+.+.||.|+||+||+|+.+.++..||||.+.+.. ..+..|+.||+.++|||||++++|+ .+..+
T Consensus 9 ~~~y~~~~~iG~GsfavVykg~h~~~~~~VAIK~i~~~~l~~k~~e~L~~Ei~iLkel~H~nIV~l~d~~-----~~~~~ 83 (429)
T KOG0595|consen 9 VGDYELSREIGSGSFAVVYKGRHKKSGTEVAIKCIAKKKLNKKLVELLLSEIKILKELKHPNIVRLLDCI-----EDDDF 83 (429)
T ss_pred cccceehhhccCcceEEEEEeEeccCCceEEeeeehhhccCHHHHHHHHHHHHHHHhcCCcceeeEEEEE-----ecCCe
Confidence 456999999999999999999999999999999986542 3346899999999999999999999 55568
Q ss_pred EEEEeeechhhHHHHhhhhhhcCCCcCHHHHHHHHHHHHHHHHHHHhhCCcccCCCCCCceEEcCC-C----CcEEEeee
Q 011138 210 LNLVLEYISETVYRVSKHYTRMNQHVPILYVQLYTYQICRALNYLHHVVGVCHRDIKPQNLLVNPH-T----HQLKICDF 284 (492)
Q Consensus 210 ~~lV~E~~~~~l~~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~yLH~~~givHrDlKp~NILl~~~-~----~~vkL~DF 284 (492)
+|||||||.|+.+.. +.+..+.+++..++.++.||+.||++||+ ++||||||||+||||+.. + ..+||+||
T Consensus 84 i~lVMEyC~gGDLs~---yi~~~~~l~e~t~r~Fm~QLA~alq~L~~-~~IiHRDLKPQNiLLs~~~~~~~~~~LKIADF 159 (429)
T KOG0595|consen 84 IYLVMEYCNGGDLSD---YIRRRGRLPEATARHFMQQLASALQFLHE-NNIIHRDLKPQNILLSTTARNDTSPVLKIADF 159 (429)
T ss_pred EEEEEEeCCCCCHHH---HHHHcCCCCHHHHHHHHHHHHHHHHHHHH-CCeeeccCCcceEEeccCCCCCCCceEEeccc
Confidence 999999999654432 23334579999999999999999999997 999999999999999764 2 25899999
Q ss_pred cCccccCCCCCCccceeccCccCchhhcCCCCCCcchhhHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCCHHHH
Q 011138 285 GSAKMLVPGEPNISYICSRYYRAPELIFGATEYTTAIDMWSIGCVLAELLLGQPLFPGESGVDQLVEIIKILGTPTREEI 364 (492)
Q Consensus 285 G~a~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DvwSlGvil~ell~G~~pf~~~~~~~~~~~i~~~~g~p~~~~~ 364 (492)
|+|+.+.++....+.||++.|||||++.. ..|+.|+|+||+|+|||+|++|++||...+..+.+..+.+.-
T Consensus 160 GfAR~L~~~~~a~tlcGSplYMAPEV~~~-~~YdAKADLWSiG~Ilyq~l~g~~Pf~a~t~~eL~~~~~k~~-------- 230 (429)
T KOG0595|consen 160 GFARFLQPGSMAETLCGSPLYMAPEVIMS-QQYDAKADLWSIGTILYQCLTGKPPFDAETPKELLLYIKKGN-------- 230 (429)
T ss_pred chhhhCCchhHHHHhhCCccccCHHHHHh-ccccchhhHHHHHHHHHHHHhCCCCccccCHHHHHHHHhccc--------
Confidence 99999998888889999999999999964 459999999999999999999999999999888777554411
Q ss_pred hhcCCCCcccCCCcccCCCcccccCCCCChhHhhhhccccccCCCCcCCHHHhhCCCCCCCC
Q 011138 365 KCMNPNYTEFKFPQIKAHPWHKIFHKRMPPEALDLVSRLLQYSPSLRCTALEACAHPFFDDL 426 (492)
Q Consensus 365 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~Li~~~L~~dP~~R~t~~e~l~Hp~f~~~ 426 (492)
...| .++..+++...+|+..+|+.||..|.+..+-+.|+++..-
T Consensus 231 ---------~~~~---------~~~~~~s~~~~~Ll~~ll~~~~~~~~~~~~~~~~~~l~~~ 274 (429)
T KOG0595|consen 231 ---------EIVP---------VLPAELSNPLRELLISLLQRNPKDRISFEDFFDHPFLAAN 274 (429)
T ss_pred ---------cccC---------chhhhccCchhhhhhHHHhcCccccCchHHhhhhhhcccC
Confidence 1111 1223467778899999999999999999999999999754
No 22
>KOG0583 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=6.9e-52 Score=415.92 Aligned_cols=250 Identities=34% Similarity=0.517 Sum_probs=217.7
Q ss_pred ccceeEeeeeccCCceEEEEEEEcCCCCEEEEEEeccc---------hhhHHHHHHHHHHcC-CCCccccceeeeeccCC
Q 011138 136 TISYMAERVVGTGSFGVVFQAKCLETGDSVAIKKVLQD---------KRYKNRELQIMRLLN-HPNVVSLKHCFFSTTEK 205 (492)
Q Consensus 136 ~~~y~~~~~lG~G~fg~Vy~~~~~~~g~~vAiK~~~~~---------~~~~~~E~~il~~l~-h~nIv~l~~~~~~~~~~ 205 (492)
...|.+++.||+|+||+|+.|.+..+|+.||+|++.+. .....+|+.+++.+. ||||+++++++..
T Consensus 16 ~g~y~~~~~lG~GsfgkV~~a~~~~t~~~vAiKii~~~~~~~~~~~~~~~i~rEi~~~~~~~~HpnI~~l~ev~~t---- 91 (370)
T KOG0583|consen 16 IGKYELGRTLGSGSFGKVKLAKHRLTGEKVAIKIIDRKKVSSKSQKLDELIKREISILRRLRSHPNIIRLLEVFAT---- 91 (370)
T ss_pred cCceeeeeeecCCCCeeEEEeeeccCCCeEEEEEechhcccccccccchhhHHHHHHHHHhccCCCEeEEEEEEec----
Confidence 34699999999999999999999999999999976543 223458999999999 9999999999843
Q ss_pred CceEEEEEeeechh-hHHHHhhhhhhcCCCcCHHHHHHHHHHHHHHHHHHHhhCCcccCCCCCCceEEcCC-CCcEEEee
Q 011138 206 DELYLNLVLEYISE-TVYRVSKHYTRMNQHVPILYVQLYTYQICRALNYLHHVVGVCHRDIKPQNLLVNPH-THQLKICD 283 (492)
Q Consensus 206 ~~~~~~lV~E~~~~-~l~~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~yLH~~~givHrDlKp~NILl~~~-~~~vkL~D 283 (492)
...+|+|||||.| +|++.+.. ...+.+..++.+++||+.|++|||+ +||+||||||||||++.+ + ++||+|
T Consensus 92 -~~~~~ivmEy~~gGdL~~~i~~----~g~l~E~~ar~~F~Qlisav~y~H~-~gi~HRDLK~ENilld~~~~-~~Kl~D 164 (370)
T KOG0583|consen 92 -PTKIYIVMEYCSGGDLFDYIVN----KGRLKEDEARKYFRQLISAVAYCHS-RGIVHRDLKPENILLDGNEG-NLKLSD 164 (370)
T ss_pred -CCeEEEEEEecCCccHHHHHHH----cCCCChHHHHHHHHHHHHHHHHHHh-CCEeeCCCCHHHEEecCCCC-CEEEec
Confidence 3348999999996 56654433 5678889999999999999999997 999999999999999988 6 899999
Q ss_pred ecCcccc-CCCCCCccceeccCccCchhhcCCC-CCCcchhhHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCCH
Q 011138 284 FGSAKML-VPGEPNISYICSRYYRAPELIFGAT-EYTTAIDMWSIGCVLAELLLGQPLFPGESGVDQLVEIIKILGTPTR 361 (492)
Q Consensus 284 FG~a~~~-~~~~~~~~~~gt~~y~aPE~~~~~~-~~~~~~DvwSlGvil~ell~G~~pf~~~~~~~~~~~i~~~~g~p~~ 361 (492)
||++... ..+....+.+||+.|+|||++.+.. +-+.++||||+||+||.|++|+.||...+....+..|.+
T Consensus 165 FG~s~~~~~~~~~l~t~cGsp~Y~aPEvl~~~~~Y~g~~aDvWS~GViLy~ml~G~~PF~d~~~~~l~~ki~~------- 237 (370)
T KOG0583|consen 165 FGLSAISPGEDGLLKTFCGSPAYAAPEVLSGKGTYSGKAADVWSLGVILYVLLCGRLPFDDSNVPNLYRKIRK------- 237 (370)
T ss_pred cccccccCCCCCcccCCCCCcccCCHHHhCCCCCcCCchhhhhhhHHHHHHHHhCCCCCCCccHHHHHHHHhc-------
Confidence 9999987 4667778899999999999998877 557899999999999999999999999887777777655
Q ss_pred HHHhhcCCCCcccCCCcccCCCcccccCCCC-ChhHhhhhccccccCCCCcCCHHHhhCCCCCCC
Q 011138 362 EEIKCMNPNYTEFKFPQIKAHPWHKIFHKRM-PPEALDLVSRLLQYSPSLRCTALEACAHPFFDD 425 (492)
Q Consensus 362 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-s~~~~~Li~~~L~~dP~~R~t~~e~l~Hp~f~~ 425 (492)
..+.+|. .+ ++++++||.+||..||.+|+|+.+++.||||+.
T Consensus 238 ----------~~~~~p~------------~~~S~~~~~Li~~mL~~~P~~R~t~~~i~~h~w~~~ 280 (370)
T KOG0583|consen 238 ----------GEFKIPS------------YLLSPEARSLIEKMLVPDPSTRITLLEILEHPWFQK 280 (370)
T ss_pred ----------CCccCCC------------CcCCHHHHHHHHHHcCCCcccCCCHHHHhhChhhcc
Confidence 3444443 45 999999999999999999999999999999996
No 23
>KOG0591 consensus NIMA (never in mitosis)-related G2-specific serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]
Probab=100.00 E-value=4.1e-53 Score=386.84 Aligned_cols=255 Identities=29% Similarity=0.530 Sum_probs=213.4
Q ss_pred cceeEeeeeccCCceEEEEEEEcCCCCEEEEEEeccc------hhhHHHHHHHHHHcCCCCccccceeeeeccCCCceEE
Q 011138 137 ISYMAERVVGTGSFGVVFQAKCLETGDSVAIKKVLQD------KRYKNRELQIMRLLNHPNVVSLKHCFFSTTEKDELYL 210 (492)
Q Consensus 137 ~~y~~~~~lG~G~fg~Vy~~~~~~~g~~vAiK~~~~~------~~~~~~E~~il~~l~h~nIv~l~~~~~~~~~~~~~~~ 210 (492)
..|.+.++||+|+||.||++.+..+|..||.|.+.-+ ....-.|+.+|++|+|||||+++++-+. ++...+
T Consensus 19 ~~y~Il~~IG~GsFg~vykv~~~~~g~l~a~K~i~f~~md~k~rq~~v~Ei~lLkQL~HpNIVqYy~~~f~---~~~evl 95 (375)
T KOG0591|consen 19 ADYQILKKIGRGSFGEVYKVQCLLDGKLVALKKIQFGMMDAKARQDCVKEISLLKQLNHPNIVQYYAHSFI---EDNEVL 95 (375)
T ss_pred HHHHHHHHHcCCcchheEEeeeccCcchhhhhhcchhhccHHHHHHHHHHHHHHHhcCCchHHHHHHHhhh---ccchhh
Confidence 4699999999999999999999999999999988532 3344579999999999999999984332 333348
Q ss_pred EEEeeech-hhHHHHhhhhhhcCCCcCHHHHHHHHHHHHHHHHHHHh--hC-CcccCCCCCCceEEcCCCCcEEEeeecC
Q 011138 211 NLVLEYIS-ETVYRVSKHYTRMNQHVPILYVQLYTYQICRALNYLHH--VV-GVCHRDIKPQNLLVNPHTHQLKICDFGS 286 (492)
Q Consensus 211 ~lV~E~~~-~~l~~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~yLH~--~~-givHrDlKp~NILl~~~~~~vkL~DFG~ 286 (492)
+||||||+ |+|.++++++....+.+++..++.++.|+|.||..+|+ .+ -|+||||||.||+|+.+| .|||+|||+
T Consensus 96 nivmE~c~~GDLsqmIk~~K~qkr~ipE~~Vwk~f~QL~~AL~~cH~~~~r~~VmHRDIKPaNIFl~~~g-vvKLGDfGL 174 (375)
T KOG0591|consen 96 NIVMELCDAGDLSQMIKHFKKQKRLIPEKTVWKYFVQLCRALYHCHSKIPRGTVMHRDIKPANIFLTANG-VVKLGDFGL 174 (375)
T ss_pred HHHHHhhcccCHHHHHHHHHhccccCchHHHHHHHHHHHHHHHHHhccccccceeeccCcchheEEcCCC-ceeeccchh
Confidence 89999998 67889999999999999999999999999999999995 22 289999999999999888 899999999
Q ss_pred ccccCCCCC-CccceeccCccCchhhcCCCCCCcchhhHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCCHHHHh
Q 011138 287 AKMLVPGEP-NISYICSRYYRAPELIFGATEYTTAIDMWSIGCVLAELLLGQPLFPGESGVDQLVEIIKILGTPTREEIK 365 (492)
Q Consensus 287 a~~~~~~~~-~~~~~gt~~y~aPE~~~~~~~~~~~~DvwSlGvil~ell~G~~pf~~~~~~~~~~~i~~~~g~p~~~~~~ 365 (492)
++.+..... ..+++|||+||+||.+.+.+ |+.++||||+||++|||+.-++||.|.+-.+...+|.++
T Consensus 175 ~r~l~s~~tfA~S~VGTPyYMSPE~i~~~~-Y~~kSDiWslGCllyEMcaL~~PF~g~n~~~L~~KI~qg---------- 243 (375)
T KOG0591|consen 175 GRFLSSKTTFAHSLVGTPYYMSPERIHESG-YNFKSDIWSLGCLLYEMCALQSPFYGDNLLSLCKKIEQG---------- 243 (375)
T ss_pred HhHhcchhHHHHhhcCCCcccCHHHHhcCC-CCcchhHHHHHHHHHHHHhcCCCcccccHHHHHHHHHcC----------
Confidence 998855443 34689999999999997665 999999999999999999999999999766666666542
Q ss_pred hcCCCCcccCCCcccCCCcccccCCCCChhHhhhhccccccCCCCcCCHHHhhCCCCCCCCCC
Q 011138 366 CMNPNYTEFKFPQIKAHPWHKIFHKRMPPEALDLVSRLLQYSPSLRCTALEACAHPFFDDLRD 428 (492)
Q Consensus 366 ~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~Li~~~L~~dP~~R~t~~e~l~Hp~f~~~~~ 428 (492)
.+|.++ ....|.++..||..|+..||..||+. ||++.++..
T Consensus 244 ---------d~~~~p--------~~~YS~~l~~li~~ci~vd~~~RP~t-----~~~v~di~~ 284 (375)
T KOG0591|consen 244 ---------DYPPLP--------DEHYSTDLRELINMCIAVDPEQRPDT-----VPYVQDIQS 284 (375)
T ss_pred ---------CCCCCc--------HHHhhhHHHHHHHHHccCCcccCCCc-----chHHHHHHH
Confidence 111111 13578999999999999999999987 666665543
No 24
>KOG0585 consensus Ca2+/calmodulin-dependent protein kinase kinase beta and related serine/threonine protein kinases [Signal transduction mechanisms]
Probab=100.00 E-value=1.2e-50 Score=394.14 Aligned_cols=259 Identities=30% Similarity=0.445 Sum_probs=218.3
Q ss_pred CCccccceeEeeeeccCCceEEEEEEEcCCCCEEEEEEeccch------------------hhHHHHHHHHHHcCCCCcc
Q 011138 132 QPKQTISYMAERVVGTGSFGVVFQAKCLETGDSVAIKKVLQDK------------------RYKNRELQIMRLLNHPNVV 193 (492)
Q Consensus 132 ~~~~~~~y~~~~~lG~G~fg~Vy~~~~~~~g~~vAiK~~~~~~------------------~~~~~E~~il~~l~h~nIv 193 (492)
..++.++|++.+.||+|.||.|.+|++..+++.||||++.+.+ +...+|+.||++|.|||||
T Consensus 92 ~~k~lNqy~l~~eiG~G~yGkVkLar~~~~~~l~AiKil~K~~~~~~~~~~~~~a~~~~~~ekv~~EIailKkl~H~nVV 171 (576)
T KOG0585|consen 92 DRKQLNQYELIKEIGSGQYGKVKLARDEVDGKLYAIKILPKKELRRQYGFPRQPAMKLMPIEKVRREIAILKKLHHPNVV 171 (576)
T ss_pred cceehhheehhhhhcCCccceEEEEeecCCCcEEEEEeechhhhhhhcccccccccccCcHHHHHHHHHHHHhcCCcCee
Confidence 3456678999999999999999999999999999999985432 2335799999999999999
Q ss_pred ccceeeeeccCCCceEEEEEeeechhhHHHHhhhhhhcCCC-cCHHHHHHHHHHHHHHHHHHHhhCCcccCCCCCCceEE
Q 011138 194 SLKHCFFSTTEKDELYLNLVLEYISETVYRVSKHYTRMNQH-VPILYVQLYTYQICRALNYLHHVVGVCHRDIKPQNLLV 272 (492)
Q Consensus 194 ~l~~~~~~~~~~~~~~~~lV~E~~~~~l~~~~~~~~~~~~~-~~~~~~~~i~~qi~~aL~yLH~~~givHrDlKp~NILl 272 (492)
+|+++.-+ .....+|||+|||..+-... ...... +++.+++.|++.++.||+|||. +|||||||||.|+||
T Consensus 172 ~LiEvLDD---P~s~~~YlVley~s~G~v~w----~p~d~~els~~~Ar~ylrDvv~GLEYLH~-QgiiHRDIKPsNLLl 243 (576)
T KOG0585|consen 172 KLIEVLDD---PESDKLYLVLEYCSKGEVKW----CPPDKPELSEQQARKYLRDVVLGLEYLHY-QGIIHRDIKPSNLLL 243 (576)
T ss_pred EEEEeecC---cccCceEEEEEeccCCcccc----CCCCcccccHHHHHHHHHHHHHHHHHHHh-cCeeccccchhheEE
Confidence 99998733 33446899999999664432 222344 8999999999999999999996 999999999999999
Q ss_pred cCCCCcEEEeeecCccccCCCC------CCccceeccCccCchhhcC---CCCCCcchhhHHHHHHHHHHHhCCCCCCCC
Q 011138 273 NPHTHQLKICDFGSAKMLVPGE------PNISYICSRYYRAPELIFG---ATEYTTAIDMWSIGCVLAELLLGQPLFPGE 343 (492)
Q Consensus 273 ~~~~~~vkL~DFG~a~~~~~~~------~~~~~~gt~~y~aPE~~~~---~~~~~~~~DvwSlGvil~ell~G~~pf~~~ 343 (492)
+.++ +|||+|||.+.....+. .....+|||.|+|||.+.+ ....+.+.||||+||+||+|+.|+.||-+.
T Consensus 244 ~~~g-~VKIsDFGVs~~~~~~~~~~~d~~L~~tvGTPAF~APE~c~~~~~~~~~g~a~DiWalGVTLYCllfG~~PF~~~ 322 (576)
T KOG0585|consen 244 SSDG-TVKISDFGVSNEFPQGSDEGSDDQLSRTVGTPAFFAPELCSGGNSFSYSGFALDIWALGVTLYCLLFGQLPFFDD 322 (576)
T ss_pred cCCC-cEEeeccceeeecccCCccccHHHHhhcCCCccccchHhhcCCCCccccchhhhhhhhhhhHHHhhhccCCcccc
Confidence 9997 89999999987663321 2234789999999999976 334578999999999999999999999999
Q ss_pred ChHHHHHHHHHHhCCCCHHHHhhcCCCCcccCCCcccCCCcccccCCCCChhHhhhhccccccCCCCcCCHHHhhCCCCC
Q 011138 344 SGVDQLVEIIKILGTPTREEIKCMNPNYTEFKFPQIKAHPWHKIFHKRMPPEALDLVSRLLQYSPSLRCTALEACAHPFF 423 (492)
Q Consensus 344 ~~~~~~~~i~~~~g~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~Li~~~L~~dP~~R~t~~e~l~Hp~f 423 (492)
...+.+.+|+. ..+.||.. +.+.++++|||.+||++||++|+++.++..|||.
T Consensus 323 ~~~~l~~KIvn-----------------~pL~fP~~----------pe~~e~~kDli~~lL~KdP~~Ri~l~~ik~Hpwv 375 (576)
T KOG0585|consen 323 FELELFDKIVN-----------------DPLEFPEN----------PEINEDLKDLIKRLLEKDPEQRITLPDIKLHPWV 375 (576)
T ss_pred hHHHHHHHHhc-----------------CcccCCCc----------ccccHHHHHHHHHHhhcChhheeehhhheeccee
Confidence 99999998877 45566653 2478999999999999999999999999999999
Q ss_pred CCC
Q 011138 424 DDL 426 (492)
Q Consensus 424 ~~~ 426 (492)
..-
T Consensus 376 t~~ 378 (576)
T KOG0585|consen 376 TRD 378 (576)
T ss_pred ccC
Confidence 865
No 25
>KOG0694 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=1.2e-50 Score=411.02 Aligned_cols=255 Identities=30% Similarity=0.506 Sum_probs=221.5
Q ss_pred CccccceeEeeeeccCCceEEEEEEEcCCCCEEEEEEeccch-------hhHHHHHHHHHHcC-CCCccccceeeeeccC
Q 011138 133 PKQTISYMAERVVGTGSFGVVFQAKCLETGDSVAIKKVLQDK-------RYKNRELQIMRLLN-HPNVVSLKHCFFSTTE 204 (492)
Q Consensus 133 ~~~~~~y~~~~~lG~G~fg~Vy~~~~~~~g~~vAiK~~~~~~-------~~~~~E~~il~~l~-h~nIv~l~~~~~~~~~ 204 (492)
+....+|.+.++||+|+||+|+++..+.+++.||||.++++. .....|..|+.... ||.+++++.+|
T Consensus 364 ~~~l~~F~~l~vLGkGsFGkV~lae~k~~~e~yAIK~LKK~~Il~~d~Ve~~~~EkrI~~la~~HPFL~~L~~~f----- 438 (694)
T KOG0694|consen 364 PLTLDDFRLLAVLGRGSFGKVLLAELKGTNEYYAIKVLKKGDILQRDEVESLMCEKRIFELANRHPFLVNLFSCF----- 438 (694)
T ss_pred cccccceEEEEEeccCcCceEEEEEEcCCCcEEEEEEeeccceeccccHHHHHHHHHHHHHhccCCeEeeccccc-----
Confidence 344567999999999999999999999999999999987653 33457888888776 99999999999
Q ss_pred CCceEEEEEeeechhhHHHHhhhhhhcCCCcCHHHHHHHHHHHHHHHHHHHhhCCcccCCCCCCceEEcCCCCcEEEeee
Q 011138 205 KDELYLNLVLEYISETVYRVSKHYTRMNQHVPILYVQLYTYQICRALNYLHHVVGVCHRDIKPQNLLVNPHTHQLKICDF 284 (492)
Q Consensus 205 ~~~~~~~lV~E~~~~~l~~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~yLH~~~givHrDlKp~NILl~~~~~~vkL~DF 284 (492)
+...++|+||||+.|+.+ .+ ......|++..+++|+..|+.||.|||+ +||||||||.+|||+|.+| .+||+||
T Consensus 439 QT~~~l~fvmey~~Ggdm---~~-~~~~~~F~e~rarfyaAev~l~L~fLH~-~~IIYRDlKLdNiLLD~eG-h~kiADF 512 (694)
T KOG0694|consen 439 QTKEHLFFVMEYVAGGDL---MH-HIHTDVFSEPRARFYAAEVVLGLQFLHE-NGIIYRDLKLDNLLLDTEG-HVKIADF 512 (694)
T ss_pred ccCCeEEEEEEecCCCcE---EE-EEecccccHHHHHHHHHHHHHHHHHHHh-cCceeeecchhheEEcccC-cEEeccc
Confidence 566679999999998752 12 2234779999999999999999999998 9999999999999999999 5999999
Q ss_pred cCccccC-CCCCCccceeccCccCchhhcCCCCCCcchhhHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCCHHH
Q 011138 285 GSAKMLV-PGEPNISYICSRYYRAPELIFGATEYTTAIDMWSIGCVLAELLLGQPLFPGESGVDQLVEIIKILGTPTREE 363 (492)
Q Consensus 285 G~a~~~~-~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DvwSlGvil~ell~G~~pf~~~~~~~~~~~i~~~~g~p~~~~ 363 (492)
|+++... .+....++||||.|||||++.+.. |+.++|+|||||+|||||.|+.||.|++..+.+..|+.
T Consensus 513 GlcKe~m~~g~~TsTfCGTpey~aPEil~e~~-Yt~aVDWW~lGVLlyeML~Gq~PF~gddEee~FdsI~~--------- 582 (694)
T KOG0694|consen 513 GLCKEGMGQGDRTSTFCGTPEFLAPEVLTEQS-YTRAVDWWGLGVLLYEMLVGESPFPGDDEEEVFDSIVN--------- 582 (694)
T ss_pred ccccccCCCCCccccccCChhhcChhhhccCc-ccchhhHHHHHHHHHHHHcCCCCCCCCCHHHHHHHHhc---------
Confidence 9998765 566777899999999999997665 99999999999999999999999999999998888876
Q ss_pred HhhcCCCCcccCCCcccCCCcccccCCCCChhHhhhhccccccCCCCcCC-----HHHhhCCCCCCCCCC
Q 011138 364 IKCMNPNYTEFKFPQIKAHPWHKIFHKRMPPEALDLVSRLLQYSPSLRCT-----ALEACAHPFFDDLRD 428 (492)
Q Consensus 364 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~Li~~~L~~dP~~R~t-----~~e~l~Hp~f~~~~~ 428 (492)
.+.. |+..+|.++.++++++|..||++|+. +.+|..||||+.+..
T Consensus 583 --------d~~~------------yP~~ls~ea~~il~~ll~k~p~kRLG~~e~d~~~i~~hpFFr~i~w 632 (694)
T KOG0694|consen 583 --------DEVR------------YPRFLSKEAIAIMRRLLRKNPEKRLGSGERDAEDIKKHPFFRSIDW 632 (694)
T ss_pred --------CCCC------------CCCcccHHHHHHHHHHhccCcccccCCCCCCchhhhhCCccccCCH
Confidence 2333 33468999999999999999999996 578999999998764
No 26
>cd07871 STKc_PCTAIRE3 Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-3 kinase. Serine/Threonine Kinases (STKs), PCTAIRE-3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-3 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-3 shows a restricted pattern of expression and is present in brain, kidney, and intestine. It is elevated in Alzheimer's disease (AD) and has been shown to associate with paired helical filament
Probab=100.00 E-value=1.2e-49 Score=391.16 Aligned_cols=276 Identities=33% Similarity=0.632 Sum_probs=230.3
Q ss_pred cceeEeeeeccCCceEEEEEEEcCCCCEEEEEEeccc-----hhhHHHHHHHHHHcCCCCccccceeeeeccCCCceEEE
Q 011138 137 ISYMAERVVGTGSFGVVFQAKCLETGDSVAIKKVLQD-----KRYKNRELQIMRLLNHPNVVSLKHCFFSTTEKDELYLN 211 (492)
Q Consensus 137 ~~y~~~~~lG~G~fg~Vy~~~~~~~g~~vAiK~~~~~-----~~~~~~E~~il~~l~h~nIv~l~~~~~~~~~~~~~~~~ 211 (492)
.+|.+.+.||.|+||.||+|.+..++..||+|.+... .....+|+.+++.++||||+++++++ .+..+++
T Consensus 5 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~-----~~~~~~~ 79 (288)
T cd07871 5 ETYVKLDKLGEGTYATVFKGRSKLTENLVALKEIRLEHEEGAPCTAIREVSLLKNLKHANIVTLHDII-----HTERCLT 79 (288)
T ss_pred ccceEeeEEecCCCEEEEEEEECCCCCEEEEEEecccccCCcchhHHHHHHHHHhCCCCCEeeEEEEE-----cCCCeEE
Confidence 4699999999999999999999999999999988532 12345799999999999999999988 4445689
Q ss_pred EEeeechhhHHHHhhhhhhcCCCcCHHHHHHHHHHHHHHHHHHHhhCCcccCCCCCCceEEcCCCCcEEEeeecCccccC
Q 011138 212 LVLEYISETVYRVSKHYTRMNQHVPILYVQLYTYQICRALNYLHHVVGVCHRDIKPQNLLVNPHTHQLKICDFGSAKMLV 291 (492)
Q Consensus 212 lV~E~~~~~l~~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~yLH~~~givHrDlKp~NILl~~~~~~vkL~DFG~a~~~~ 291 (492)
+||||+.+++...+.. ....+++..++.++.||+.||.|||+ +||+||||||+|||++.++ .+||+|||+++...
T Consensus 80 lv~e~~~~~l~~~l~~---~~~~~~~~~~~~~~~qi~~aL~~LH~-~~ivH~dlkp~Nil~~~~~-~~kl~DfG~~~~~~ 154 (288)
T cd07871 80 LVFEYLDSDLKQYLDN---CGNLMSMHNVKIFMFQLLRGLSYCHK-RKILHRDLKPQNLLINEKG-ELKLADFGLARAKS 154 (288)
T ss_pred EEEeCCCcCHHHHHHh---cCCCCCHHHHHHHHHHHHHHHHHHHh-CCcccCCCCHHHEEECCCC-CEEECcCcceeecc
Confidence 9999999877765432 23457888999999999999999997 9999999999999999887 79999999987543
Q ss_pred CCC-CCccceeccCccCchhhcCCCCCCcchhhHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCCHHHHhhcC--
Q 011138 292 PGE-PNISYICSRYYRAPELIFGATEYTTAIDMWSIGCVLAELLLGQPLFPGESGVDQLVEIIKILGTPTREEIKCMN-- 368 (492)
Q Consensus 292 ~~~-~~~~~~gt~~y~aPE~~~~~~~~~~~~DvwSlGvil~ell~G~~pf~~~~~~~~~~~i~~~~g~p~~~~~~~~~-- 368 (492)
... ......+|+.|+|||++.+...++.++||||+||++|+|++|++||.+.+..+.+..+.+.++.|+.+.+....
T Consensus 155 ~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~~l~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 234 (288)
T cd07871 155 VPTKTYSNEVVTLWYRPPDVLLGSTEYSTPIDMWGVGCILYEMATGRPMFPGSTVKEELHLIFRLLGTPTEETWPGITSN 234 (288)
T ss_pred CCCccccCceecccccChHHhcCCcccCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCChHHhhccccc
Confidence 222 23346789999999999776678999999999999999999999999999999999999999999988876543
Q ss_pred CCCcccCCCcccCCCcccccCCCCChhHhhhhccccccCCCCcCCHHHhhCCCCC
Q 011138 369 PNYTEFKFPQIKAHPWHKIFHKRMPPEALDLVSRLLQYSPSLRCTALEACAHPFF 423 (492)
Q Consensus 369 ~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~Li~~~L~~dP~~R~t~~e~l~Hp~f 423 (492)
..+..+.+|.....++.. ....++++++|||++||++||.+|||+.|+++||||
T Consensus 235 ~~~~~~~~~~~~~~~~~~-~~~~~~~~~~dll~~mL~~dp~~R~t~~~~l~hp~f 288 (288)
T cd07871 235 EEFRSYLFPQYRAQPLIN-HAPRLDTDGIDLLSSLLLYETKSRISAEAALRHSYF 288 (288)
T ss_pred hhhhccccCccCCCchHH-hCCCCCHHHHHHHHHhcCcCcccCCCHHHHhcCCCC
Confidence 233344455443333332 224678999999999999999999999999999998
No 27
>KOG0597 consensus Serine-threonine protein kinase FUSED [General function prediction only]
Probab=100.00 E-value=6.5e-51 Score=402.36 Aligned_cols=250 Identities=32% Similarity=0.525 Sum_probs=216.4
Q ss_pred cceeEeeeeccCCceEEEEEEEcCCCCEEEEEEeccch------hhHHHHHHHHHHcCCCCccccceeeeeccCCCceEE
Q 011138 137 ISYMAERVVGTGSFGVVFQAKCLETGDSVAIKKVLQDK------RYKNRELQIMRLLNHPNVVSLKHCFFSTTEKDELYL 210 (492)
Q Consensus 137 ~~y~~~~~lG~G~fg~Vy~~~~~~~g~~vAiK~~~~~~------~~~~~E~~il~~l~h~nIv~l~~~~~~~~~~~~~~~ 210 (492)
.+|.+.+.||+|+||+||+|+.+.+.+.||||.+.+.. +...+|++|++.|+|||||.++++| +....+
T Consensus 2 e~yhv~e~iG~Gsfg~VYKgrrK~t~~~vAik~i~K~gr~~k~l~~l~~ev~i~r~lkHpniv~m~esf-----Et~~~~ 76 (808)
T KOG0597|consen 2 EQYHVYEMIGEGSFGRVYKGRRKYTIQVVAIKFIDKSGRNEKELKNLRQEVRILRSLKHPNIVEMLESF-----ETSAHL 76 (808)
T ss_pred cchhHHHHhcCCccceeeecccccceeEEEEEEehhcCCchHHHHHHHHHHHHHHhcCCcchhhHHHhh-----cccceE
Confidence 36889999999999999999999999999999986543 2356899999999999999999999 556669
Q ss_pred EEEeeechhhHHHHhhhhhhcCCCcCHHHHHHHHHHHHHHHHHHHhhCCcccCCCCCCceEEcCCCCcEEEeeecCcccc
Q 011138 211 NLVLEYISETVYRVSKHYTRMNQHVPILYVQLYTYQICRALNYLHHVVGVCHRDIKPQNLLVNPHTHQLKICDFGSAKML 290 (492)
Q Consensus 211 ~lV~E~~~~~l~~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~yLH~~~givHrDlKp~NILl~~~~~~vkL~DFG~a~~~ 290 (492)
++|.|||.|+|..++.. ...+++..++.+++|++.||.|||+ .+|+|||+||.|||++.++ .+|+||||+|+.+
T Consensus 77 ~vVte~a~g~L~~il~~----d~~lpEe~v~~~a~~LVsaL~yLhs-~rilhrd~kPqniLl~~~~-~~KlcdFg~Ar~m 150 (808)
T KOG0597|consen 77 WVVTEYAVGDLFTILEQ----DGKLPEEQVRAIAYDLVSALYYLHS-NRILHRDMKPQNILLEKGG-TLKLCDFGLARAM 150 (808)
T ss_pred EEEehhhhhhHHHHHHh----ccCCCHHHHHHHHHHHHHHHHHHHh-cCcccccCCcceeeecCCC-ceeechhhhhhhc
Confidence 99999999988876554 6789999999999999999999997 9999999999999999888 7999999999987
Q ss_pred CCCCC-CccceeccCccCchhhcCCCCCCcchhhHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCCHHHHhhcCC
Q 011138 291 VPGEP-NISYICSRYYRAPELIFGATEYTTAIDMWSIGCVLAELLLGQPLFPGESGVDQLVEIIKILGTPTREEIKCMNP 369 (492)
Q Consensus 291 ~~~~~-~~~~~gt~~y~aPE~~~~~~~~~~~~DvwSlGvil~ell~G~~pf~~~~~~~~~~~i~~~~g~p~~~~~~~~~~ 369 (492)
..+.. .....|||.|||||++.+ ..|+..+|+||+|||+|||++|++||...+-.+....|.+
T Consensus 151 ~~~t~vltsikGtPlYmAPElv~e-~pyd~~sDlWslGcilYE~~~G~PPF~a~si~~Lv~~I~~--------------- 214 (808)
T KOG0597|consen 151 STNTSVLTSIKGTPLYMAPELVEE-QPYDHTSDLWSLGCILYELYVGQPPFYARSITQLVKSILK--------------- 214 (808)
T ss_pred ccCceeeeeccCcccccCHHHHcC-CCccchhhHHHHHHHHHHHhcCCCCchHHHHHHHHHHHhc---------------
Confidence 55443 345689999999999975 4599999999999999999999999988776655555544
Q ss_pred CCcccCCCcccCCCcccccCCCCChhHhhhhccccccCCCCcCCHHHhhCCCCCCCCC
Q 011138 370 NYTEFKFPQIKAHPWHKIFHKRMPPEALDLVSRLLQYSPSLRCTALEACAHPFFDDLR 427 (492)
Q Consensus 370 ~~~~~~~~~~~~~~~~~~~~~~~s~~~~~Li~~~L~~dP~~R~t~~e~l~Hp~f~~~~ 427 (492)
.+.+ .+..++.++++|+..+|++||.+|+|..+++.|||++.-.
T Consensus 215 --d~v~------------~p~~~S~~f~nfl~gLL~kdP~~RltW~~Ll~HpF~k~~~ 258 (808)
T KOG0597|consen 215 --DPVK------------PPSTASSSFVNFLQGLLIKDPAQRLTWTDLLGHPFWKGKI 258 (808)
T ss_pred --CCCC------------CcccccHHHHHHHHHHhhcChhhcccHHHHhcChHHhhhh
Confidence 1111 1236899999999999999999999999999999998644
No 28
>KOG0580 consensus Serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]
Probab=100.00 E-value=1.4e-50 Score=362.83 Aligned_cols=252 Identities=31% Similarity=0.467 Sum_probs=221.4
Q ss_pred cccceeEeeeeccCCceEEEEEEEcCCCCEEEEEEeccch-------hhHHHHHHHHHHcCCCCccccceeeeeccCCCc
Q 011138 135 QTISYMAERVVGTGSFGVVFQAKCLETGDSVAIKKVLQDK-------RYKNRELQIMRLLNHPNVVSLKHCFFSTTEKDE 207 (492)
Q Consensus 135 ~~~~y~~~~~lG~G~fg~Vy~~~~~~~g~~vAiK~~~~~~-------~~~~~E~~il~~l~h~nIv~l~~~~~~~~~~~~ 207 (492)
..++|.+++.||+|-||.||+|+.+.++-.||+|++.+.. ..+.||++|...|+||||+++|++| .|.
T Consensus 20 ~l~dfeigr~LgkgkFG~vYlarekks~~IvalKVlfKsqi~~~~v~~qlrREiEIqs~L~hpnilrlY~~f-----hd~ 94 (281)
T KOG0580|consen 20 TLDDFEIGRPLGKGKFGNVYLAREKKSLFIVALKVLFKSQILKTQVEHQLRREIEIQSHLRHPNILRLYGYF-----HDS 94 (281)
T ss_pred chhhccccccccCCccccEeEeeeccCCcEEEEeeeeHHHHHHhcchhhhhheeEeecccCCccHHhhhhhe-----ecc
Confidence 3457999999999999999999999999999999986543 4566899999999999999999999 677
Q ss_pred eEEEEEeeech-hhHHHHhhhhhhcCCCcCHHHHHHHHHHHHHHHHHHHhhCCcccCCCCCCceEEcCCCCcEEEeeecC
Q 011138 208 LYLNLVLEYIS-ETVYRVSKHYTRMNQHVPILYVQLYTYQICRALNYLHHVVGVCHRDIKPQNLLVNPHTHQLKICDFGS 286 (492)
Q Consensus 208 ~~~~lV~E~~~-~~l~~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~yLH~~~givHrDlKp~NILl~~~~~~vkL~DFG~ 286 (492)
..+||++||.. |.++..+. ......+++..+..|++|++.||.|+|. ++||||||||+|+|++.++ .+||+|||.
T Consensus 95 ~riyLilEya~~gel~k~L~--~~~~~~f~e~~~a~Yi~q~A~Al~y~h~-k~VIhRdiKpenlLlg~~~-~lkiAdfGw 170 (281)
T KOG0580|consen 95 KRIYLILEYAPRGELYKDLQ--EGRMKRFDEQRAATYIKQLANALLYCHL-KRVIHRDIKPENLLLGSAG-ELKIADFGW 170 (281)
T ss_pred ceeEEEEEecCCchHHHHHH--hcccccccccchhHHHHHHHHHHHHhcc-CCcccCCCCHHHhccCCCC-CeeccCCCc
Confidence 78999999998 45555443 1235668889999999999999999997 9999999999999999888 899999999
Q ss_pred ccccCCCCCCccceeccCccCchhhcCCCCCCcchhhHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCCHHHHhh
Q 011138 287 AKMLVPGEPNISYICSRYYRAPELIFGATEYTTAIDMWSIGCVLAELLLGQPLFPGESGVDQLVEIIKILGTPTREEIKC 366 (492)
Q Consensus 287 a~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DvwSlGvil~ell~G~~pf~~~~~~~~~~~i~~~~g~p~~~~~~~ 366 (492)
+.... .....+.|||..|.+||++.+.. ++..+|+|++|++.||++.|.+||...+..+.+.+|.+
T Consensus 171 sV~~p-~~kR~tlcgt~dyl~pEmv~~~~-hd~~Vd~w~lgvl~yeflvg~ppFes~~~~etYkrI~k------------ 236 (281)
T KOG0580|consen 171 SVHAP-SNKRKTLCGTLDYLPPEMVEGRG-HDKFVDLWSLGVLCYEFLVGLPPFESQSHSETYKRIRK------------ 236 (281)
T ss_pred eeecC-CCCceeeecccccCCHhhcCCCC-ccchhhHHHHHHHHHHHHhcCCchhhhhhHHHHHHHHH------------
Confidence 87543 66677899999999999997655 89999999999999999999999999998888888877
Q ss_pred cCCCCcccCCCcccCCCcccccCCCCChhHhhhhccccccCCCCcCCHHHhhCCCCCCCC
Q 011138 367 MNPNYTEFKFPQIKAHPWHKIFHKRMPPEALDLVSRLLQYSPSLRCTALEACAHPFFDDL 426 (492)
Q Consensus 367 ~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~Li~~~L~~dP~~R~t~~e~l~Hp~f~~~ 426 (492)
.++.+| ..++.++.|||.+||.++|.+|.+..|++.|||+...
T Consensus 237 -----~~~~~p------------~~is~~a~dlI~~ll~~~p~~r~~l~~v~~hpwI~a~ 279 (281)
T KOG0580|consen 237 -----VDLKFP------------STISGGAADLISRLLVKNPIERLALTEVMDHPWIVAN 279 (281)
T ss_pred -----ccccCC------------cccChhHHHHHHHHhccCccccccHHHHhhhHHHHhc
Confidence 344444 4689999999999999999999999999999998754
No 29
>KOG0198 consensus MEKK and related serine/threonine protein kinases [Signal transduction mechanisms]
Probab=100.00 E-value=2e-50 Score=390.45 Aligned_cols=256 Identities=32% Similarity=0.510 Sum_probs=206.7
Q ss_pred cceeEeeeeccCCceEEEEEEEcCCCCEEEEEEeccc----hhhHHHHHHHHHHcCCCCccccceeeeeccCCCceEEEE
Q 011138 137 ISYMAERVVGTGSFGVVFQAKCLETGDSVAIKKVLQD----KRYKNRELQIMRLLNHPNVVSLKHCFFSTTEKDELYLNL 212 (492)
Q Consensus 137 ~~y~~~~~lG~G~fg~Vy~~~~~~~g~~vAiK~~~~~----~~~~~~E~~il~~l~h~nIv~l~~~~~~~~~~~~~~~~l 212 (492)
.+|..++.||+|+||.||++.+..+|+..|||.+... ...+.+|+.+|++|+|||||++++....... ..++|
T Consensus 17 ~~~~~~~~lG~Gs~G~V~l~~~~~~g~~~AvK~v~~~~~~~~~~l~~Ei~iL~~l~~p~IV~~~G~~~~~~~---~~~~i 93 (313)
T KOG0198|consen 17 SNWSKGKLLGRGSFGSVYLATNKKTGELMAVKSVELEDSPTSESLEREIRILSRLNHPNIVQYYGSSSSREN---DEYNI 93 (313)
T ss_pred chhhhhccccCccceEEEEEEecCCCcceeeeeeecccchhHHHHHHHHHHHHhCCCCCEEeeCCccccccC---eeeEe
Confidence 3588889999999999999999999999999988665 4456899999999999999999987433221 46889
Q ss_pred EeeechhhHH-HHhhhhhhcCCCcCHHHHHHHHHHHHHHHHHHHhhCCcccCCCCCCceEEcC-CCCcEEEeeecCcccc
Q 011138 213 VLEYISETVY-RVSKHYTRMNQHVPILYVQLYTYQICRALNYLHHVVGVCHRDIKPQNLLVNP-HTHQLKICDFGSAKML 290 (492)
Q Consensus 213 V~E~~~~~l~-~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~yLH~~~givHrDlKp~NILl~~-~~~~vkL~DFG~a~~~ 290 (492)
.|||++++.+ +++.. ....+++..++.+++||+.||+|||+ +|||||||||+|||++. ++ .+||+|||+++..
T Consensus 94 ~mEy~~~GsL~~~~~~---~g~~l~E~~v~~ytr~iL~GL~ylHs-~g~vH~DiK~~NiLl~~~~~-~~KlaDFG~a~~~ 168 (313)
T KOG0198|consen 94 FMEYAPGGSLSDLIKR---YGGKLPEPLVRRYTRQILEGLAYLHS-KGIVHCDIKPANILLDPSNG-DVKLADFGLAKKL 168 (313)
T ss_pred eeeccCCCcHHHHHHH---cCCCCCHHHHHHHHHHHHHHHHHHHh-CCEeccCcccceEEEeCCCC-eEEeccCcccccc
Confidence 9999997544 33332 22269999999999999999999997 99999999999999998 56 8999999999876
Q ss_pred CC----CCCCccceeccCccCchhhcCCCCCCcchhhHHHHHHHHHHHhCCCCCCCC-ChHHHHHHHHHHhCCCCHHHHh
Q 011138 291 VP----GEPNISYICSRYYRAPELIFGATEYTTAIDMWSIGCVLAELLLGQPLFPGE-SGVDQLVEIIKILGTPTREEIK 365 (492)
Q Consensus 291 ~~----~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DvwSlGvil~ell~G~~pf~~~-~~~~~~~~i~~~~g~p~~~~~~ 365 (492)
.. ........||+.|||||++........++|||||||++.||+||.+||... ...+.+..+...
T Consensus 169 ~~~~~~~~~~~~~~Gtp~~maPEvi~~g~~~~~~sDiWSlGCtVvEM~Tg~~PW~~~~~~~~~~~~ig~~---------- 238 (313)
T KOG0198|consen 169 ESKGTKSDSELSVQGTPNYMAPEVIRNGEVARRESDIWSLGCTVVEMLTGKPPWSEFFEEAEALLLIGRE---------- 238 (313)
T ss_pred ccccccccccccccCCccccCchhhcCCCcCCccchhhhcCCEEEeccCCCCcchhhcchHHHHHHHhcc----------
Confidence 53 122345789999999999975322345999999999999999999999873 333333333221
Q ss_pred hcCCCCcccCCCcccCCCcccccCCCCChhHhhhhccccccCCCCcCCHHHhhCCCCCCCCC
Q 011138 366 CMNPNYTEFKFPQIKAHPWHKIFHKRMPPEALDLVSRLLQYSPSLRCTALEACAHPFFDDLR 427 (492)
Q Consensus 366 ~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~Li~~~L~~dP~~R~t~~e~l~Hp~f~~~~ 427 (492)
...| .++..+|+++++||.+||.+||++||||+++|+|||.+...
T Consensus 239 --------~~~P---------~ip~~ls~~a~~Fl~~C~~~~p~~Rpta~eLL~hpf~~~~~ 283 (313)
T KOG0198|consen 239 --------DSLP---------EIPDSLSDEAKDFLRKCFKRDPEKRPTAEELLEHPFLKQNS 283 (313)
T ss_pred --------CCCC---------CCCcccCHHHHHHHHHHhhcCcccCcCHHHHhhChhhhccc
Confidence 0111 23456899999999999999999999999999999998754
No 30
>KOG0662 consensus Cyclin-dependent kinase CDK5 [Intracellular trafficking, secretion, and vesicular transport; Signal transduction mechanisms]
Probab=100.00 E-value=1.4e-49 Score=341.61 Aligned_cols=277 Identities=36% Similarity=0.670 Sum_probs=235.6
Q ss_pred ceeEeeeeccCCceEEEEEEEcCCCCEEEEEEeccch------hhHHHHHHHHHHcCCCCccccceeeeeccCCCceEEE
Q 011138 138 SYMAERVVGTGSFGVVFQAKCLETGDSVAIKKVLQDK------RYKNRELQIMRLLNHPNVVSLKHCFFSTTEKDELYLN 211 (492)
Q Consensus 138 ~y~~~~~lG~G~fg~Vy~~~~~~~g~~vAiK~~~~~~------~~~~~E~~il~~l~h~nIv~l~~~~~~~~~~~~~~~~ 211 (492)
.|...++||+|.||+||+|++..+++.||+|.+.-+. ....||+.+++.|+|.|||++++.. ..+..+-
T Consensus 3 ~ydkmekigegtygtvfkarn~~t~eivalkrvrlddddegvpssalreicllkelkhknivrl~dvl-----hsdkklt 77 (292)
T KOG0662|consen 3 KYDKMEKIGEGTYGTVFKARNRETHEIVALKRVRLDDDDEGVPSSALREICLLKELKHKNIVRLHDVL-----HSDKKLT 77 (292)
T ss_pred chHHHHhhcCCcceeeEecccCCccceEEEEEEeccCCCCCCcHHHHHHHHHHHHhhhcceeehhhhh-----ccCceeE
Confidence 3666788999999999999999999999999986543 3346899999999999999999987 4445588
Q ss_pred EEeeechhhHHHHhhhhhhcCCCcCHHHHHHHHHHHHHHHHHHHhhCCcccCCCCCCceEEcCCCCcEEEeeecCccccC
Q 011138 212 LVLEYISETVYRVSKHYTRMNQHVPILYVQLYTYQICRALNYLHHVVGVCHRDIKPQNLLVNPHTHQLKICDFGSAKMLV 291 (492)
Q Consensus 212 lV~E~~~~~l~~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~yLH~~~givHrDlKp~NILl~~~~~~vkL~DFG~a~~~~ 291 (492)
+|+|||..++.. .+...++.++...++.++.|+++||.|+|+ +++.||||||+|+||+.++ ++||+|||+++.+.
T Consensus 78 lvfe~cdqdlkk---yfdslng~~d~~~~rsfmlqllrgl~fchs-hnvlhrdlkpqnllin~ng-elkladfglarafg 152 (292)
T KOG0662|consen 78 LVFEFCDQDLKK---YFDSLNGDLDPEIVRSFMLQLLRGLGFCHS-HNVLHRDLKPQNLLINRNG-ELKLADFGLARAFG 152 (292)
T ss_pred EeHHHhhHHHHH---HHHhcCCcCCHHHHHHHHHHHHhhhhhhhh-hhhhhccCCcceEEeccCC-cEEecccchhhhcC
Confidence 999999987664 455668889999999999999999999997 9999999999999999998 89999999998763
Q ss_pred CCC-CCccceeccCccCchhhcCCCCCCcchhhHHHHHHHHHHH-hCCCCCCCCChHHHHHHHHHHhCCCCHHHHhhcC-
Q 011138 292 PGE-PNISYICSRYYRAPELIFGATEYTTAIDMWSIGCVLAELL-LGQPLFPGESGVDQLVEIIKILGTPTREEIKCMN- 368 (492)
Q Consensus 292 ~~~-~~~~~~gt~~y~aPE~~~~~~~~~~~~DvwSlGvil~ell-~G~~pf~~~~~~~~~~~i~~~~g~p~~~~~~~~~- 368 (492)
-.- -....+.|.+|++|.+++|..-|+...|+||.|||+.|+. .|++.|++.+-.+++..|++.+|.|.++.|+.+.
T Consensus 153 ipvrcysaevvtlwyrppdvlfgakly~tsidmwsagcifaelanagrplfpg~dvddqlkrif~~lg~p~ed~wps~t~ 232 (292)
T KOG0662|consen 153 IPVRCYSAEVVTLWYRPPDVLFGAKLYSTSIDMWSAGCIFAELANAGRPLFPGNDVDDQLKRIFRLLGTPTEDQWPSMTK 232 (292)
T ss_pred CceEeeeceeeeeeccCcceeeeeehhccchHhhhcchHHHHHhhcCCCCCCCCcHHHHHHHHHHHhCCCccccCCcccc
Confidence 222 2234577999999999999999999999999999999999 5999999999999999999999999999998765
Q ss_pred -CCCcccCCCcccC-CCcccccCCCCChhHhhhhccccccCCCCcCCHHHhhCCCCCCCCC
Q 011138 369 -PNYTEFKFPQIKA-HPWHKIFHKRMPPEALDLVSRLLQYSPSLRCTALEACAHPFFDDLR 427 (492)
Q Consensus 369 -~~~~~~~~~~~~~-~~~~~~~~~~~s~~~~~Li~~~L~~dP~~R~t~~e~l~Hp~f~~~~ 427 (492)
++|.. +|.... ..|..+ -++++...+||++++|..+|.+|++++++++||||.+..
T Consensus 233 lpdyk~--yp~ypattswsqi-vp~lns~grdllqkll~cnp~qrisaeaalqhpyf~d~s 290 (292)
T KOG0662|consen 233 LPDYKP--YPIYPATTSWSQI-VPKLNSTGRDLLQKLLKCNPAQRISAEAALQHPYFSDFS 290 (292)
T ss_pred CCCCcc--cCCccccchHHHH-hhhhcchhHHHHHHHhccCcccccCHHHHhcCccccccC
Confidence 33332 333222 234433 356778899999999999999999999999999999754
No 31
>KOG0032 consensus Ca2+/calmodulin-dependent protein kinase, EF-Hand protein superfamily [Signal transduction mechanisms]
Probab=100.00 E-value=4.5e-49 Score=395.39 Aligned_cols=254 Identities=35% Similarity=0.574 Sum_probs=218.9
Q ss_pred cceeEeeeeccCCceEEEEEEEcCCCCEEEEEEeccch-------hhHHHHHHHHHHcC-CCCccccceeeeeccCCCce
Q 011138 137 ISYMAERVVGTGSFGVVFQAKCLETGDSVAIKKVLQDK-------RYKNRELQIMRLLN-HPNVVSLKHCFFSTTEKDEL 208 (492)
Q Consensus 137 ~~y~~~~~lG~G~fg~Vy~~~~~~~g~~vAiK~~~~~~-------~~~~~E~~il~~l~-h~nIv~l~~~~~~~~~~~~~ 208 (492)
..|.+++.||+|.||.||+|..+.||+.+|+|.+.+.. ....+|+.||+++. |||||++++.| ++..
T Consensus 35 ~~Y~l~~~lG~G~Fg~v~~~~~~~tg~~~A~K~i~k~~~~~~~~~~~v~~Ev~il~~l~~hpniv~l~~~~-----e~~~ 109 (382)
T KOG0032|consen 35 EKYELGRELGRGQFGVVYLCREKSTGKEVACKVIPKRKLRGKEDREDVRREVAILQQLSGHPNIVQLKDAF-----EDPD 109 (382)
T ss_pred ccEEehhhhCCCCceEEEEEEecCCCceeEEEEeehhhccccccHHHHHHHHHHHHhccCCCCEEEEEEEE-----EcCC
Confidence 46999999999999999999999999999999986543 35678999999999 99999999999 5555
Q ss_pred EEEEEeeechhh-HHHHhhhhhhcCCCcCHHHHHHHHHHHHHHHHHHHhhCCcccCCCCCCceEEcCCC---CcEEEeee
Q 011138 209 YLNLVLEYISET-VYRVSKHYTRMNQHVPILYVQLYTYQICRALNYLHHVVGVCHRDIKPQNLLVNPHT---HQLKICDF 284 (492)
Q Consensus 209 ~~~lV~E~~~~~-l~~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~yLH~~~givHrDlKp~NILl~~~~---~~vkL~DF 284 (492)
.+++|||+|.|+ +++.+... .+++..+..++.||+.++.|||+ .||+||||||+|+|+.... ..+|++||
T Consensus 110 ~~~lvmEL~~GGeLfd~i~~~-----~~sE~da~~~~~~il~av~~lH~-~gvvHrDlKpEN~L~~~~~~~~~~ik~~DF 183 (382)
T KOG0032|consen 110 SVYLVMELCEGGELFDRIVKK-----HYSERDAAGIIRQILEAVKYLHS-LGVVHRDLKPENLLLASKDEGSGRIKLIDF 183 (382)
T ss_pred eEEEEEEecCCchHHHHHHHc-----cCCHHHHHHHHHHHHHHHHHHHh-CCceeccCCHHHeeeccccCCCCcEEEeeC
Confidence 799999999954 55544432 39999999999999999999997 9999999999999996442 27999999
Q ss_pred cCccccCCCCCCccceeccCccCchhhcCCCCCCcchhhHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCCHHHH
Q 011138 285 GSAKMLVPGEPNISYICSRYYRAPELIFGATEYTTAIDMWSIGCVLAELLLGQPLFPGESGVDQLVEIIKILGTPTREEI 364 (492)
Q Consensus 285 G~a~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DvwSlGvil~ell~G~~pf~~~~~~~~~~~i~~~~g~p~~~~~ 364 (492)
|++.....+......+||++|+|||++.+ ..|+..+||||+||++|.|++|.+||.+.+......+|..
T Consensus 184 Gla~~~~~~~~~~~~~Gtp~y~APEvl~~-~~y~~~~DiWS~Gvi~yiLL~G~~PF~~~~~~~~~~~i~~---------- 252 (382)
T KOG0032|consen 184 GLAKFIKPGERLHTIVGTPEYVAPEVLGG-RPYGDEVDVWSIGVILYILLSGVPPFWGETEFEIFLAILR---------- 252 (382)
T ss_pred CCceEccCCceEeeecCCccccCchhhcC-CCCCcccchhHHHHHHHHHhhCCCCCcCCChhHHHHHHHc----------
Confidence 99998877667778999999999999954 4599999999999999999999999999998888777655
Q ss_pred hhcCCCCcccCCCcccCCCcccccCCCCChhHhhhhccccccCCCCcCCHHHhhCCCCCCCCC
Q 011138 365 KCMNPNYTEFKFPQIKAHPWHKIFHKRMPPEALDLVSRLLQYSPSLRCTALEACAHPFFDDLR 427 (492)
Q Consensus 365 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~Li~~~L~~dP~~R~t~~e~l~Hp~f~~~~ 427 (492)
..+.|+ ...|..++..+++||++||..||.+|+|+.++|+|||++...
T Consensus 253 -------~~~~f~--------~~~w~~is~~akd~i~~ll~~dp~~R~ta~~~L~HpWi~~~~ 300 (382)
T KOG0032|consen 253 -------GDFDFT--------SEPWDDISESAKDFIRKLLEFDPRKRLTAAQALQHPWIKSIG 300 (382)
T ss_pred -------CCCCCC--------CCCccccCHHHHHHHHHhcccCcccCCCHHHHhcCccccCCc
Confidence 222222 223456899999999999999999999999999999998763
No 32
>KOG0599 consensus Phosphorylase kinase gamma subunit [Carbohydrate transport and metabolism]
Probab=100.00 E-value=1.1e-50 Score=369.17 Aligned_cols=255 Identities=29% Similarity=0.485 Sum_probs=217.8
Q ss_pred ceeEeeeeccCCceEEEEEEEcCCCCEEEEEEeccc------------hhhHHHHHHHHHHcC-CCCccccceeeeeccC
Q 011138 138 SYMAERVVGTGSFGVVFQAKCLETGDSVAIKKVLQD------------KRYKNRELQIMRLLN-HPNVVSLKHCFFSTTE 204 (492)
Q Consensus 138 ~y~~~~~lG~G~fg~Vy~~~~~~~g~~vAiK~~~~~------------~~~~~~E~~il~~l~-h~nIv~l~~~~~~~~~ 204 (492)
.|.-.++||.|.-++|.+|..+.+|+.+|+|++... .....+|+.||+++. ||+|+++.++|
T Consensus 18 ~y~pkeilgrgvss~vrRci~k~t~~e~a~kii~~~at~~~~e~~~~~~EaT~~Ev~ILRqv~GHP~II~l~D~y----- 92 (411)
T KOG0599|consen 18 KYEPKEILGRGVSSVVRRCIHKETGKEFAVKIIDVTATTESGETPYEMREATRQEISILRQVMGHPYIIDLQDVY----- 92 (411)
T ss_pred hcChHHHhcccchhhhhhhhhcccccceeEEEEEecccccCCccHHHHHHHHHHHHHHHHHhcCCCcEEEeeeec-----
Confidence 477888999999999999999999999999988321 122347999999985 99999999999
Q ss_pred CCceEEEEEeeech-hhHHHHhhhhhhcCCCcCHHHHHHHHHHHHHHHHHHHhhCCcccCCCCCCceEEcCCCCcEEEee
Q 011138 205 KDELYLNLVLEYIS-ETVYRVSKHYTRMNQHVPILYVQLYTYQICRALNYLHHVVGVCHRDIKPQNLLVNPHTHQLKICD 283 (492)
Q Consensus 205 ~~~~~~~lV~E~~~-~~l~~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~yLH~~~givHrDlKp~NILl~~~~~~vkL~D 283 (492)
+...++++|+|.|+ |.|.+.+.. .-.+++...+.|++|++.|++|||. ++||||||||+|||++.+. ++||+|
T Consensus 93 es~sF~FlVFdl~prGELFDyLts----~VtlSEK~tR~iMrqlfegVeylHa-~~IVHRDLKpENILlddn~-~i~isD 166 (411)
T KOG0599|consen 93 ESDAFVFLVFDLMPRGELFDYLTS----KVTLSEKETRRIMRQLFEGVEYLHA-RNIVHRDLKPENILLDDNM-NIKISD 166 (411)
T ss_pred cCcchhhhhhhhcccchHHHHhhh----heeecHHHHHHHHHHHHHHHHHHHH-hhhhhcccChhheeecccc-ceEEec
Confidence 66778999999998 556654432 4568899999999999999999996 9999999999999999887 899999
Q ss_pred ecCccccCCCCCCccceeccCccCchhhc-----CCCCCCcchhhHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCC
Q 011138 284 FGSAKMLVPGEPNISYICSRYYRAPELIF-----GATEYTTAIDMWSIGCVLAELLLGQPLFPGESGVDQLVEIIKILGT 358 (492)
Q Consensus 284 FG~a~~~~~~~~~~~~~gt~~y~aPE~~~-----~~~~~~~~~DvwSlGvil~ell~G~~pf~~~~~~~~~~~i~~~~g~ 358 (492)
||+|+.+.+++.....||||.|+|||.+. +...|+..+|+||+|||||.||.|.+||+.....-.+..|+.
T Consensus 167 FGFa~~l~~GekLrelCGTPgYLAPEtikC~m~e~~pGYs~EVD~Wa~GVImyTLLaGcpPFwHRkQmlMLR~Ime---- 242 (411)
T KOG0599|consen 167 FGFACQLEPGEKLRELCGTPGYLAPETIKCSMYENHPGYSKEVDEWACGVIMYTLLAGCPPFWHRKQMLMLRMIME---- 242 (411)
T ss_pred cceeeccCCchhHHHhcCCCcccChhheeeecccCCCCccchhhHHHHHHHHHHHHcCCCchhHHHHHHHHHHHHh----
Confidence 99999999999999999999999999983 445699999999999999999999999988776666666665
Q ss_pred CCHHHHhhcCCCCcccCCCcccCCCcccccCCCCChhHhhhhccccccCCCCcCCHHHhhCCCCCCCCCC
Q 011138 359 PTREEIKCMNPNYTEFKFPQIKAHPWHKIFHKRMPPEALDLVSRLLQYSPSLRCTALEACAHPFFDDLRD 428 (492)
Q Consensus 359 p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~Li~~~L~~dP~~R~t~~e~l~Hp~f~~~~~ 428 (492)
..+.|.. . -|.+++.+++|||.+||+.||.+|+|+.|+|+||||.++..
T Consensus 243 -------------GkyqF~s---p-----eWadis~~~KdLIsrlLqVdp~~Ritake~LaHpff~q~~~ 291 (411)
T KOG0599|consen 243 -------------GKYQFRS---P-----EWADISATVKDLISRLLQVDPTKRITAKEALAHPFFIQIAQ 291 (411)
T ss_pred -------------cccccCC---c-----chhhccccHHHHHHHHHeeCchhcccHHHHhcChHHHHHHH
Confidence 2333332 2 23568999999999999999999999999999999976543
No 33
>cd07869 STKc_PFTAIRE1 Catalytic domain of the Serine/Threonine Kinase, PFTAIRE-1 kinase. Serine/Threonine Kinases (STKs), PFTAIRE-1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PFTAIRE-1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PFTAIRE-1 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PFTAIRE-1 is widely expressed except in the spleen and thymus. It is highly expressed in the brain, heart, pancreas, testis, and ovary, and is localized in the cytoplasm. It is regulated by cyclin D3 an
Probab=100.00 E-value=1.9e-48 Score=385.31 Aligned_cols=281 Identities=31% Similarity=0.554 Sum_probs=220.5
Q ss_pred cceeEeeeeccCCceEEEEEEEcCCCCEEEEEEeccch-----hhHHHHHHHHHHcCCCCccccceeeeeccCCCceEEE
Q 011138 137 ISYMAERVVGTGSFGVVFQAKCLETGDSVAIKKVLQDK-----RYKNRELQIMRLLNHPNVVSLKHCFFSTTEKDELYLN 211 (492)
Q Consensus 137 ~~y~~~~~lG~G~fg~Vy~~~~~~~g~~vAiK~~~~~~-----~~~~~E~~il~~l~h~nIv~l~~~~~~~~~~~~~~~~ 211 (492)
.+|.+.+.||+|+||.||+|.+..+|+.||||++.... ....+|+.+++.++||||+++++++ .+..++|
T Consensus 5 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~-----~~~~~~~ 79 (303)
T cd07869 5 DSYEKLEKLGEGSYATVYKGKSKVNGKLVALKVIRLQEEEGTPFTAIREASLLKGLKHANIVLLHDII-----HTKETLT 79 (303)
T ss_pred ccceEeeeEEecCCEEEEEEEECCCCCEEEEEEeccccccccchhHHHHHHHHhhCCCCCcCeEEEEE-----ecCCeEE
Confidence 46999999999999999999999999999999885332 2345799999999999999999988 4445689
Q ss_pred EEeeechhhHHHHhhhhhhcCCCcCHHHHHHHHHHHHHHHHHHHhhCCcccCCCCCCceEEcCCCCcEEEeeecCccccC
Q 011138 212 LVLEYISETVYRVSKHYTRMNQHVPILYVQLYTYQICRALNYLHHVVGVCHRDIKPQNLLVNPHTHQLKICDFGSAKMLV 291 (492)
Q Consensus 212 lV~E~~~~~l~~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~yLH~~~givHrDlKp~NILl~~~~~~vkL~DFG~a~~~~ 291 (492)
+||||+.++++..+.. ....+++..++.++.||+.||.|||+ +||+||||||+|||++.++ .+||+|||++....
T Consensus 80 lv~e~~~~~l~~~~~~---~~~~~~~~~~~~~~~qi~~al~~lH~-~~ivH~dlkp~Nill~~~~-~~kl~Dfg~~~~~~ 154 (303)
T cd07869 80 LVFEYVHTDLCQYMDK---HPGGLHPENVKLFLFQLLRGLSYIHQ-RYILHRDLKPQNLLISDTG-ELKLADFGLARAKS 154 (303)
T ss_pred EEEECCCcCHHHHHHh---CCCCCCHHHHHHHHHHHHHHHHHHHH-CCeecCCCCHHHEEECCCC-CEEECCCCcceecc
Confidence 9999999887765532 23568888999999999999999997 9999999999999999887 79999999987542
Q ss_pred C-CCCCccceeccCccCchhhcCCCCCCcchhhHHHHHHHHHHHhCCCCCCCCCh-HHHHHHHHHHhCCCCHHHHhhcC-
Q 011138 292 P-GEPNISYICSRYYRAPELIFGATEYTTAIDMWSIGCVLAELLLGQPLFPGESG-VDQLVEIIKILGTPTREEIKCMN- 368 (492)
Q Consensus 292 ~-~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DvwSlGvil~ell~G~~pf~~~~~-~~~~~~i~~~~g~p~~~~~~~~~- 368 (492)
. ........||+.|+|||++.+...++.++|||||||++|+|++|..||.+..+ .+.+..+...++.|....+....
T Consensus 155 ~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 234 (303)
T cd07869 155 VPSHTYSNEVVTLWYRPPDVLLGSTEYSTCLDMWGVGCIFVEMIQGVAAFPGMKDIQDQLERIFLVLGTPNEDTWPGVHS 234 (303)
T ss_pred CCCccCCCCcccCCCCChHHHcCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCccHHHHHHHHHHHhCCCChhhccchhh
Confidence 2 22233467899999999987766789999999999999999999999987544 45667777777887766554322
Q ss_pred -CCCcccCCCcccCCCcccccC-CCCChhHhhhhccccccCCCCcCCHHHhhCCCCCCCCC
Q 011138 369 -PNYTEFKFPQIKAHPWHKIFH-KRMPPEALDLVSRLLQYSPSLRCTALEACAHPFFDDLR 427 (492)
Q Consensus 369 -~~~~~~~~~~~~~~~~~~~~~-~~~s~~~~~Li~~~L~~dP~~R~t~~e~l~Hp~f~~~~ 427 (492)
+.+....+.......+...+. ...++++++||.+||++||.+|||+.|+++||||+++.
T Consensus 235 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dli~~mL~~dp~~R~s~~~~l~h~~f~~~~ 295 (303)
T cd07869 235 LPHFKPERFTLYSPKNLRQAWNKLSYVNHAEDLASKLLQCFPKNRLSAQAALSHEYFSDLP 295 (303)
T ss_pred ccccccccccccCCccHHHHhhccCCChHHHHHHHHHhccCchhccCHHHHhcCcccccCC
Confidence 111111111111111111111 13567899999999999999999999999999999864
No 34
>cd07859 STKc_TDY_MAPK_plant Catalytic domain of the Serine/Threonine Kinases, TDY Mitogen-Activated Protein Kinases from Plants. Serine/Threonine Kinases (STKs), Plant TDY Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TDY MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. In plants, MAPKs are associated with physiological, developmental, hormonal, and stress responses. Some plants show numerous gene duplications of MAPKs. Arabidopsis thaliana harbors at least 20 MAPKs, named AtMPK1-20. Oryza sativa contains at least 17 MAPKs. There are two subtypes of plant MAPKs based on the conserved phos
Probab=100.00 E-value=3.2e-48 Score=389.33 Aligned_cols=285 Identities=40% Similarity=0.689 Sum_probs=226.6
Q ss_pred ceeEeeeeccCCceEEEEEEEcCCCCEEEEEEeccc------hhhHHHHHHHHHHcCCCCccccceeeeeccCCCceEEE
Q 011138 138 SYMAERVVGTGSFGVVFQAKCLETGDSVAIKKVLQD------KRYKNRELQIMRLLNHPNVVSLKHCFFSTTEKDELYLN 211 (492)
Q Consensus 138 ~y~~~~~lG~G~fg~Vy~~~~~~~g~~vAiK~~~~~------~~~~~~E~~il~~l~h~nIv~l~~~~~~~~~~~~~~~~ 211 (492)
+|.+.+.||+|+||.||+|.+..+|+.||||++... .....+|+.+++.++||||+++++++..........+|
T Consensus 1 ry~i~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~~~~~~ 80 (338)
T cd07859 1 RYKIQEVIGKGSYGVVCSAIDTHTGEKVAIKKINDVFEHVSDATRILREIKLLRLLRHPDIVEIKHIMLPPSRREFKDIY 80 (338)
T ss_pred CeEEEEEEeecCCeEEEEEEECCCCCEEEEEEechhhccchhHHHHHHHHHHHHhCCCCCEeeecceEeccCCCCCceEE
Confidence 489999999999999999999999999999988532 22345799999999999999999988665544445689
Q ss_pred EEeeechhhHHHHhhhhhhcCCCcCHHHHHHHHHHHHHHHHHHHhhCCcccCCCCCCceEEcCCCCcEEEeeecCccccC
Q 011138 212 LVLEYISETVYRVSKHYTRMNQHVPILYVQLYTYQICRALNYLHHVVGVCHRDIKPQNLLVNPHTHQLKICDFGSAKMLV 291 (492)
Q Consensus 212 lV~E~~~~~l~~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~yLH~~~givHrDlKp~NILl~~~~~~vkL~DFG~a~~~~ 291 (492)
+||||+++++...+.. ...+++..++.++.||+.||.|||+ +||+||||||+|||++.++ .+||+|||+++...
T Consensus 81 lv~e~~~~~L~~~l~~----~~~~~~~~~~~i~~qi~~aL~~LH~-~~ivH~dlkp~NIll~~~~-~~kL~Dfg~~~~~~ 154 (338)
T cd07859 81 VVFELMESDLHQVIKA----NDDLTPEHHQFFLYQLLRALKYIHT-ANVFHRDLKPKNILANADC-KLKICDFGLARVAF 154 (338)
T ss_pred EEEecCCCCHHHHHHh----cccCCHHHHHHHHHHHHHHHHHHHH-CCeecCCCCHHHeEECCCC-cEEEccCccccccc
Confidence 9999999887765542 3468899999999999999999997 9999999999999999888 79999999997543
Q ss_pred CCCC----CccceeccCccCchhhcCC-CCCCcchhhHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCCHHHHhh
Q 011138 292 PGEP----NISYICSRYYRAPELIFGA-TEYTTAIDMWSIGCVLAELLLGQPLFPGESGVDQLVEIIKILGTPTREEIKC 366 (492)
Q Consensus 292 ~~~~----~~~~~gt~~y~aPE~~~~~-~~~~~~~DvwSlGvil~ell~G~~pf~~~~~~~~~~~i~~~~g~p~~~~~~~ 366 (492)
.... .....||+.|+|||++.+. ..++.++|||||||++|+|++|++||.+.+...++..+...+|.|+...+..
T Consensus 155 ~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~~DvwSlGvvl~el~tg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~ 234 (338)
T cd07859 155 NDTPTAIFWTDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAEVLTGKPLFPGKNVVHQLDLITDLLGTPSPETISR 234 (338)
T ss_pred cccCccccccCCCCCCCcCCHHHHhccccccCchhHHHHHHHHHHHHHcCCCCCCCCChHHHHHHHHHHhCCCCHHHHHH
Confidence 2221 1345789999999998542 4589999999999999999999999999998888888888889888775543
Q ss_pred cCCCCcc-c--CCCcccCCCcccccCCCCChhHhhhhccccccCCCCcCCHHHhhCCCCCCCCCCC
Q 011138 367 MNPNYTE-F--KFPQIKAHPWHKIFHKRMPPEALDLVSRLLQYSPSLRCTALEACAHPFFDDLRDP 429 (492)
Q Consensus 367 ~~~~~~~-~--~~~~~~~~~~~~~~~~~~s~~~~~Li~~~L~~dP~~R~t~~e~l~Hp~f~~~~~~ 429 (492)
....-.. + ........++...+ +.+++++.+||.+||+.||++|||+.|+++||||+++...
T Consensus 235 i~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~li~~~l~~~P~~Rpt~~e~l~hp~f~~~~~~ 299 (338)
T cd07859 235 VRNEKARRYLSSMRKKQPVPFSQKF-PNADPLALRLLERLLAFDPKDRPTAEEALADPYFKGLAKV 299 (338)
T ss_pred hhhhhHHHHHHhhcccCCCchHHhc-CCCChHHHHHHHHHcCcCcccCCCHHHHhcCchhhhcCcc
Confidence 3211000 0 00000001111111 3468899999999999999999999999999999987653
No 35
>cd07848 STKc_CDKL5 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase Like 5. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 5 (CDKL5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. Mutations in the gene encoding CDKL5, previously called STK9, are associated with early onset epilepsy and severe mental retardation [X-linked infantile spasm syndrome (ISSX) or West syndrome]. In addition, CDKL5 mutations also sometimes
Probab=100.00 E-value=8e-48 Score=377.47 Aligned_cols=275 Identities=40% Similarity=0.719 Sum_probs=223.5
Q ss_pred ceeEeeeeccCCceEEEEEEEcCCCCEEEEEEeccc------hhhHHHHHHHHHHcCCCCccccceeeeeccCCCceEEE
Q 011138 138 SYMAERVVGTGSFGVVFQAKCLETGDSVAIKKVLQD------KRYKNRELQIMRLLNHPNVVSLKHCFFSTTEKDELYLN 211 (492)
Q Consensus 138 ~y~~~~~lG~G~fg~Vy~~~~~~~g~~vAiK~~~~~------~~~~~~E~~il~~l~h~nIv~l~~~~~~~~~~~~~~~~ 211 (492)
+|.+.+.||+|+||.||+|++..+++.||||++... .....+|+.+++.++||||+++++++ ....++|
T Consensus 2 ~y~~~~~lg~g~~~~v~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~-----~~~~~~~ 76 (287)
T cd07848 2 KFEVLGVVGEGAYGVVLKCRHKETKEIVAIKKFKDSEENEEVKETTLRELKMLRTLKQENIVELKEAF-----RRRGKLY 76 (287)
T ss_pred CceEEEEecccCCEEEEEEEECCCCcEEEEEEEecccccccchhhHHHHHHHHHhCCCccccchhhhE-----ecCCEEE
Confidence 599999999999999999999999999999988543 22345799999999999999999988 4445689
Q ss_pred EEeeechhhHHHHhhhhhhcCCCcCHHHHHHHHHHHHHHHHHHHhhCCcccCCCCCCceEEcCCCCcEEEeeecCccccC
Q 011138 212 LVLEYISETVYRVSKHYTRMNQHVPILYVQLYTYQICRALNYLHHVVGVCHRDIKPQNLLVNPHTHQLKICDFGSAKMLV 291 (492)
Q Consensus 212 lV~E~~~~~l~~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~yLH~~~givHrDlKp~NILl~~~~~~vkL~DFG~a~~~~ 291 (492)
+||||++++++..+.. ....+++..++.++.||+.||.|||+ .||+||||||+|||++.++ .+||+|||++....
T Consensus 77 lv~e~~~~~~l~~~~~---~~~~~~~~~~~~~~~qi~~~L~~lH~-~~i~H~dlkp~Nill~~~~-~~kl~Dfg~~~~~~ 151 (287)
T cd07848 77 LVFEYVEKNMLELLEE---MPNGVPPEKVRSYIYQLIKAIHWCHK-NDIVHRDIKPENLLISHND-VLKLCDFGFARNLS 151 (287)
T ss_pred EEEecCCCCHHHHHHh---cCCCCCHHHHHHHHHHHHHHHHHHHH-CCeecCCCCHHHEEEcCCC-cEEEeeccCccccc
Confidence 9999999887765432 24568899999999999999999997 9999999999999999887 79999999998764
Q ss_pred CCC--CCccceeccCccCchhhcCCCCCCcchhhHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCCHHHHhhc--
Q 011138 292 PGE--PNISYICSRYYRAPELIFGATEYTTAIDMWSIGCVLAELLLGQPLFPGESGVDQLVEIIKILGTPTREEIKCM-- 367 (492)
Q Consensus 292 ~~~--~~~~~~gt~~y~aPE~~~~~~~~~~~~DvwSlGvil~ell~G~~pf~~~~~~~~~~~i~~~~g~p~~~~~~~~-- 367 (492)
... ......||+.|+|||++.+.. ++.++|||||||++|+|++|++||.+.+..+.+..+....+..+...+...
T Consensus 152 ~~~~~~~~~~~~~~~y~aPE~~~~~~-~~~~~DiwslGvil~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 230 (287)
T cd07848 152 EGSNANYTEYVATRWYRSPELLLGAP-YGKAVDMWSVGCILGELSDGQPLFPGESEIDQLFTIQKVLGPLPAEQMKLFYS 230 (287)
T ss_pred ccccccccccccccccCCcHHHcCCC-CCCchhHHhHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhhCCCCHHHHHhhhc
Confidence 322 223457899999999997654 899999999999999999999999999888888888888887776655432
Q ss_pred CCCCcccCCCcccC-CCcccccCCCCChhHhhhhccccccCCCCcCCHHHhhCCCCC
Q 011138 368 NPNYTEFKFPQIKA-HPWHKIFHKRMPPEALDLVSRLLQYSPSLRCTALEACAHPFF 423 (492)
Q Consensus 368 ~~~~~~~~~~~~~~-~~~~~~~~~~~s~~~~~Li~~~L~~dP~~R~t~~e~l~Hp~f 423 (492)
++.+....++.... ..+...+...++.++++||++||++||++|||++++|+||||
T Consensus 231 ~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dll~~~L~~~P~~R~s~~~~l~hp~f 287 (287)
T cd07848 231 NPRFHGLRFPAVNHPQSLERRYLGILSGVLLDLMKNLLKLNPTDRYLTEQCLNHPAF 287 (287)
T ss_pred cchhcccccCcccCcccHHHhhhcccCHHHHHHHHHHccCCcccCCCHHHHhcCCCC
Confidence 22222222322211 112223334578999999999999999999999999999998
No 36
>PTZ00284 protein kinase; Provisional
Probab=100.00 E-value=2.9e-47 Score=399.12 Aligned_cols=282 Identities=23% Similarity=0.373 Sum_probs=214.8
Q ss_pred ccceeEeeeeccCCceEEEEEEEcCCCCEEEEEEeccc---hhhHHHHHHHHHHcCCC------CccccceeeeeccCCC
Q 011138 136 TISYMAERVVGTGSFGVVFQAKCLETGDSVAIKKVLQD---KRYKNRELQIMRLLNHP------NVVSLKHCFFSTTEKD 206 (492)
Q Consensus 136 ~~~y~~~~~lG~G~fg~Vy~~~~~~~g~~vAiK~~~~~---~~~~~~E~~il~~l~h~------nIv~l~~~~~~~~~~~ 206 (492)
..+|.+.+.||+|+||+||+|.+..+++.||||++... ......|+.+++.++|. +|++++++|.. +
T Consensus 128 ~~~y~i~~~lG~G~fg~V~~a~~~~~~~~vAvK~i~~~~~~~~~~~~e~~~l~~l~~~~~~~~~~i~~i~~~~~~----~ 203 (467)
T PTZ00284 128 TQRFKILSLLGEGTFGKVVEAWDRKRKEYCAVKIVRNVPKYTRDAKIEIQFMEKVRQADPADRFPLMKIQRYFQN----E 203 (467)
T ss_pred CCcEEEEEEEEeccCEEEEEEEEcCCCeEEEEEEEecchhhHHHHHHHHHHHHHHhhcCcccCcceeeeEEEEEc----C
Confidence 45799999999999999999999999999999998543 22345688888887654 47888887742 2
Q ss_pred ceEEEEEeeechhhHHHHhhhhhhcCCCcCHHHHHHHHHHHHHHHHHHHhhCCcccCCCCCCceEEcCCCC---------
Q 011138 207 ELYLNLVLEYISETVYRVSKHYTRMNQHVPILYVQLYTYQICRALNYLHHVVGVCHRDIKPQNLLVNPHTH--------- 277 (492)
Q Consensus 207 ~~~~~lV~E~~~~~l~~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~yLH~~~givHrDlKp~NILl~~~~~--------- 277 (492)
..++|+|||++++.++..+.. ...+++..++.|+.||+.||.|||+..|||||||||+|||++.++.
T Consensus 204 ~~~~~iv~~~~g~~l~~~l~~----~~~l~~~~~~~i~~qi~~aL~yLH~~~gIiHrDlKP~NILl~~~~~~~~~~~~~~ 279 (467)
T PTZ00284 204 TGHMCIVMPKYGPCLLDWIMK----HGPFSHRHLAQIIFQTGVALDYFHTELHLMHTDLKPENILMETSDTVVDPVTNRA 279 (467)
T ss_pred CceEEEEEeccCCCHHHHHHH----cCCCCHHHHHHHHHHHHHHHHHHHhcCCeecCCCCHHHEEEecCCcccccccccc
Confidence 346889999998888776543 3568899999999999999999995149999999999999986542
Q ss_pred ------cEEEeeecCccccCCCCCCccceeccCccCchhhcCCCCCCcchhhHHHHHHHHHHHhCCCCCCCCChHHHHHH
Q 011138 278 ------QLKICDFGSAKMLVPGEPNISYICSRYYRAPELIFGATEYTTAIDMWSIGCVLAELLLGQPLFPGESGVDQLVE 351 (492)
Q Consensus 278 ------~vkL~DFG~a~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DvwSlGvil~ell~G~~pf~~~~~~~~~~~ 351 (492)
.+||+|||.+... .......+||+.|+|||++.+. .|+.++|||||||++|||++|++||.+.+..+.+..
T Consensus 280 ~~~~~~~vkl~DfG~~~~~--~~~~~~~~gt~~Y~APE~~~~~-~~~~~~DiwSlGvil~elltG~~pf~~~~~~~~~~~ 356 (467)
T PTZ00284 280 LPPDPCRVRICDLGGCCDE--RHSRTAIVSTRHYRSPEVVLGL-GWMYSTDMWSMGCIIYELYTGKLLYDTHDNLEHLHL 356 (467)
T ss_pred cCCCCceEEECCCCccccC--ccccccccCCccccCcHHhhcC-CCCcHHHHHHHHHHHHHHHhCCCCCCCCChHHHHHH
Confidence 4999999988643 2334467899999999999765 489999999999999999999999999999999999
Q ss_pred HHHHhCCCCHHHHhhcCCC-----CcccC--CCcccCCCcccc-----c-CCCCChhHhhhhccccccCCCCcCCHHHhh
Q 011138 352 IIKILGTPTREEIKCMNPN-----YTEFK--FPQIKAHPWHKI-----F-HKRMPPEALDLVSRLLQYSPSLRCTALEAC 418 (492)
Q Consensus 352 i~~~~g~p~~~~~~~~~~~-----~~~~~--~~~~~~~~~~~~-----~-~~~~s~~~~~Li~~~L~~dP~~R~t~~e~l 418 (492)
+.+.+|.++.......... +.... .+......+... . .....+.+.|||.+||++||.+|||+.|+|
T Consensus 357 i~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dli~~mL~~dP~~R~ta~e~L 436 (467)
T PTZ00284 357 MEKTLGRLPSEWAGRCGTEEARLLYNSAGQLRPCTDPKHLARIARARPVREVIRDDLLCDLIYGLLHYDRQKRLNARQMT 436 (467)
T ss_pred HHHHcCCCCHHHHhhccchhHHHHhhhcccccccCCHHHHHhhhcccchhhhhchHHHHHHHHHhCCcChhhCCCHHHHh
Confidence 9999988776543211100 00000 000000000000 0 001246788999999999999999999999
Q ss_pred CCCCCCCCCC
Q 011138 419 AHPFFDDLRD 428 (492)
Q Consensus 419 ~Hp~f~~~~~ 428 (492)
+||||.....
T Consensus 437 ~Hp~~~~~~~ 446 (467)
T PTZ00284 437 THPYVLKYYP 446 (467)
T ss_pred cCccccccCC
Confidence 9999998653
No 37
>KOG0578 consensus p21-activated serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=5.6e-49 Score=391.59 Aligned_cols=251 Identities=28% Similarity=0.471 Sum_probs=215.5
Q ss_pred ceeEeeeeccCCceEEEEEEEcCCCCEEEEEEeccc----hhhHHHHHHHHHHcCCCCccccceeeeeccCCCceEEEEE
Q 011138 138 SYMAERVVGTGSFGVVFQAKCLETGDSVAIKKVLQD----KRYKNRELQIMRLLNHPNVVSLKHCFFSTTEKDELYLNLV 213 (492)
Q Consensus 138 ~y~~~~~lG~G~fg~Vy~~~~~~~g~~vAiK~~~~~----~~~~~~E~~il~~l~h~nIv~l~~~~~~~~~~~~~~~~lV 213 (492)
.|.....||+|+-|.||.|....+++.||||++... ++.+-+|+.+|+..+|+|||.+++.|+..+ .+++|
T Consensus 274 ~y~~~~kigqgaSG~vy~A~~~~~~~~VaiK~m~l~~Q~~keLilnEi~Vm~~~~H~NiVnfl~Sylv~d-----eLWVV 348 (550)
T KOG0578|consen 274 KYTDFKKIGQGATGGVYVARKISTKQEVAIKRMDLRKQPKKELLLNEILVMRDLHHPNIVNFLDSYLVGD-----ELWVV 348 (550)
T ss_pred hhcchhhhccccccceeeeeeccCCceEEEEEEEeccCCchhhhHHHHHHHHhccchHHHHHHHHhcccc-----eeEEE
Confidence 588888999999999999999999999999998543 345568999999999999999999996654 38999
Q ss_pred eeechhhHHHHhhhhhhcCCCcCHHHHHHHHHHHHHHHHHHHhhCCcccCCCCCCceEEcCCCCcEEEeeecCccccCCC
Q 011138 214 LEYISETVYRVSKHYTRMNQHVPILYVQLYTYQICRALNYLHHVVGVCHRDIKPQNLLVNPHTHQLKICDFGSAKMLVPG 293 (492)
Q Consensus 214 ~E~~~~~l~~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~yLH~~~givHrDlKp~NILl~~~~~~vkL~DFG~a~~~~~~ 293 (492)
|||++|+.+..+-. ...+++.++..|+++++.||+|||. +||+|||||.+|||++.++ .+||+|||++..+...
T Consensus 349 MEym~ggsLTDvVt----~~~~~E~qIA~Icre~l~aL~fLH~-~gIiHrDIKSDnILL~~~g-~vKltDFGFcaqi~~~ 422 (550)
T KOG0578|consen 349 MEYMEGGSLTDVVT----KTRMTEGQIAAICREILQGLKFLHA-RGIIHRDIKSDNILLTMDG-SVKLTDFGFCAQISEE 422 (550)
T ss_pred EeecCCCchhhhhh----cccccHHHHHHHHHHHHHHHHHHHh-cceeeeccccceeEeccCC-cEEEeeeeeeeccccc
Confidence 99999876544332 3458899999999999999999997 9999999999999999998 7999999998877555
Q ss_pred C-CCccceeccCccCchhhcCCCCCCcchhhHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCCHHHHhhcCCCCc
Q 011138 294 E-PNISYICSRYYRAPELIFGATEYTTAIDMWSIGCVLAELLLGQPLFPGESGVDQLVEIIKILGTPTREEIKCMNPNYT 372 (492)
Q Consensus 294 ~-~~~~~~gt~~y~aPE~~~~~~~~~~~~DvwSlGvil~ell~G~~pf~~~~~~~~~~~i~~~~g~p~~~~~~~~~~~~~ 372 (492)
. ...+.+|||+|||||++.. ..|+.++||||||++++||+-|.+||-.++....+..|... |.|.
T Consensus 423 ~~KR~TmVGTPYWMAPEVvtr-k~YG~KVDIWSLGIMaIEMveGEPPYlnE~PlrAlyLIa~n-g~P~------------ 488 (550)
T KOG0578|consen 423 QSKRSTMVGTPYWMAPEVVTR-KPYGPKVDIWSLGIMAIEMVEGEPPYLNENPLRALYLIATN-GTPK------------ 488 (550)
T ss_pred cCccccccCCCCccchhhhhh-cccCccccchhhhhHHHHHhcCCCCccCCChHHHHHHHhhc-CCCC------------
Confidence 4 5678899999999999964 45999999999999999999999999998887777776552 3322
Q ss_pred ccCCCcccCCCcccccCCCCChhHhhhhccccccCCCCcCCHHHhhCCCCCCCC
Q 011138 373 EFKFPQIKAHPWHKIFHKRMPPEALDLVSRLLQYSPSLRCTALEACAHPFFDDL 426 (492)
Q Consensus 373 ~~~~~~~~~~~~~~~~~~~~s~~~~~Li~~~L~~dP~~R~t~~e~l~Hp~f~~~ 426 (492)
++ .+..+|++++|||.+||+.|+.+|++|.|+|+||||+..
T Consensus 489 -lk------------~~~klS~~~kdFL~~cL~~dv~~RasA~eLL~HpFl~~a 529 (550)
T KOG0578|consen 489 -LK------------NPEKLSPELKDFLDRCLVVDVEQRASAKELLEHPFLKMA 529 (550)
T ss_pred -cC------------CccccCHHHHHHHHHHhhcchhcCCCHHHHhcChhhhhc
Confidence 11 235689999999999999999999999999999999643
No 38
>cd07862 STKc_CDK6 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 6. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 6 (CDK6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK6 is regulated by D-type cyclins and INK4 inhibitors. It is active towards the retinoblastoma (pRb) protein, implicating it to function in regulating the early G1 phase of the cell cycle. It is expressed ubiquitously and is localized in the cytopla
Probab=100.00 E-value=1.4e-47 Score=376.29 Aligned_cols=279 Identities=34% Similarity=0.579 Sum_probs=221.5
Q ss_pred ceeEeeeeccCCceEEEEEEEcC-CCCEEEEEEeccch------hhHHHHHHHHHHc---CCCCccccceeeeeccCCCc
Q 011138 138 SYMAERVVGTGSFGVVFQAKCLE-TGDSVAIKKVLQDK------RYKNRELQIMRLL---NHPNVVSLKHCFFSTTEKDE 207 (492)
Q Consensus 138 ~y~~~~~lG~G~fg~Vy~~~~~~-~g~~vAiK~~~~~~------~~~~~E~~il~~l---~h~nIv~l~~~~~~~~~~~~ 207 (492)
+|.+.+.||+|+||.||+|.+.. +|..||+|.+.... ....+|+.+++.+ +||||+++++++........
T Consensus 2 ~Y~~~~~lg~G~~g~Vy~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~hpniv~~~~~~~~~~~~~~ 81 (290)
T cd07862 2 QYECVAEIGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIREVAVLRHLETFEHPNVVRLFDVCTVSRTDRE 81 (290)
T ss_pred CcceeeEeccCCCeEEEEEEEcCCCCeEEEEEEEecccCCCCchHHHHHHHHHHHhhcccCCCCcceEEEEEecccCCCC
Confidence 59999999999999999999865 46889999875321 2334678877766 69999999998854443445
Q ss_pred eEEEEEeeechhhHHHHhhhhhhcCCCcCHHHHHHHHHHHHHHHHHHHhhCCcccCCCCCCceEEcCCCCcEEEeeecCc
Q 011138 208 LYLNLVLEYISETVYRVSKHYTRMNQHVPILYVQLYTYQICRALNYLHHVVGVCHRDIKPQNLLVNPHTHQLKICDFGSA 287 (492)
Q Consensus 208 ~~~~lV~E~~~~~l~~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~yLH~~~givHrDlKp~NILl~~~~~~vkL~DFG~a 287 (492)
..+++||||+.+++...+... ....+++..++.++.||+.||.|||+ +||+||||||+|||++.++ .+||+|||++
T Consensus 82 ~~~~lv~e~~~~~l~~~~~~~--~~~~~~~~~~~~i~~qi~~aL~~lH~-~~iiH~dlkp~Nil~~~~~-~~kl~Dfg~~ 157 (290)
T cd07862 82 TKLTLVFEHVDQDLTTYLDKV--PEPGVPTETIKDMMFQLLRGLDFLHS-HRVVHRDLKPQNILVTSSG-QIKLADFGLA 157 (290)
T ss_pred CcEEEEEccCCCCHHHHHHhC--CCCCCCHHHHHHHHHHHHHHHHHHHH-CCeeeCCCCHHHEEEcCCC-CEEEccccce
Confidence 568899999998877665432 23458889999999999999999997 9999999999999999887 7999999999
Q ss_pred cccCCCCCCccceeccCccCchhhcCCCCCCcchhhHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCCHHHHhhc
Q 011138 288 KMLVPGEPNISYICSRYYRAPELIFGATEYTTAIDMWSIGCVLAELLLGQPLFPGESGVDQLVEIIKILGTPTREEIKCM 367 (492)
Q Consensus 288 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DvwSlGvil~ell~G~~pf~~~~~~~~~~~i~~~~g~p~~~~~~~~ 367 (492)
+............||+.|+|||++.+. .++.++|||||||++|||++|.+||.+.+..+.+..++...+.|....+...
T Consensus 158 ~~~~~~~~~~~~~~~~~y~aPE~~~~~-~~~~~~DiwslG~il~el~~g~~~f~~~~~~~~~~~i~~~~~~~~~~~~~~~ 236 (290)
T cd07862 158 RIYSFQMALTSVVVTLWYRAPEVLLQS-SYATPVDLWSVGCIFAEMFRRKPLFRGSSDVDQLGKILDVIGLPGEEDWPRD 236 (290)
T ss_pred EeccCCcccccccccccccChHHHhCC-CCCCccchHHHHHHHHHHHcCCCCcCCCCHHHHHHHHHHHhCCCChhhchhh
Confidence 876544444566789999999999654 4899999999999999999999999999999999999998888877655321
Q ss_pred CCCCcccCCCcccCCCcccccCCCCChhHhhhhccccccCCCCcCCHHHhhCCCCC
Q 011138 368 NPNYTEFKFPQIKAHPWHKIFHKRMPPEALDLVSRLLQYSPSLRCTALEACAHPFF 423 (492)
Q Consensus 368 ~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~Li~~~L~~dP~~R~t~~e~l~Hp~f 423 (492)
.. .....+......+... +.+.+++.+++||.+||+.||++|||+.++|+||||
T Consensus 237 ~~-~~~~~~~~~~~~~~~~-~~~~~~~~~~~li~~~l~~~P~~R~s~~~~l~hp~f 290 (290)
T cd07862 237 VA-LPRQAFHSKSAQPIEK-FVTDIDELGKDLLLKCLTFNPAKRISAYSALSHPYF 290 (290)
T ss_pred hc-ccchhccCCCCCCHHH-HccCCCHHHHHHHHHHhccCchhcCCHHHHhcCCCC
Confidence 11 0111111111111111 234578999999999999999999999999999998
No 39
>KOG4717 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=1.4e-48 Score=381.72 Aligned_cols=256 Identities=28% Similarity=0.459 Sum_probs=226.7
Q ss_pred ccceeEeeeeccCCceEEEEEEEcCCCCEEEEEEeccch------hhHHHHHHHHHHcCCCCccccceeeeeccCCCceE
Q 011138 136 TISYMAERVVGTGSFGVVFQAKCLETGDSVAIKKVLQDK------RYKNRELQIMRLLNHPNVVSLKHCFFSTTEKDELY 209 (492)
Q Consensus 136 ~~~y~~~~~lG~G~fg~Vy~~~~~~~g~~vAiK~~~~~~------~~~~~E~~il~~l~h~nIv~l~~~~~~~~~~~~~~ 209 (492)
.+-|.+.+.||+|.|.+|-+|++.-||+.||||++.+.+ ..+.+|++.|+.++|||||+||++. .....
T Consensus 17 AGLYDLekTlG~GHFAVVKLArHVFTGekVAVKviDKTKlD~~st~hlfqEVRCMKLVQHpNiVRLYEVi-----DTQTK 91 (864)
T KOG4717|consen 17 AGLYDLEKTLGRGHFAVVKLARHVFTGEKVAVKVIDKTKLDTLSTGHLFQEVRCMKLVQHPNIVRLYEVI-----DTQTK 91 (864)
T ss_pred eeeehhhhhhcCCceehhhhhhhhcccceeEEEEecccccchhhhhHHHHHHHHHHHhcCcCeeeeeehh-----cccce
Confidence 345999999999999999999999999999999996543 3345799999999999999999988 44445
Q ss_pred EEEEeeechh-hHHHHhhhhhhcCCCcCHHHHHHHHHHHHHHHHHHHhhCCcccCCCCCCceEEcCCCCcEEEeeecCcc
Q 011138 210 LNLVLEYISE-TVYRVSKHYTRMNQHVPILYVQLYTYQICRALNYLHHVVGVCHRDIKPQNLLVNPHTHQLKICDFGSAK 288 (492)
Q Consensus 210 ~~lV~E~~~~-~l~~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~yLH~~~givHrDlKp~NILl~~~~~~vkL~DFG~a~ 288 (492)
+|||+|+..+ ++++++.. ....+.+..++.|+.||+.|+.|+|+ ..+|||||||+||.+-+..+-|||+|||++.
T Consensus 92 lyLiLELGD~GDl~DyImK---He~Gl~E~La~kYF~QI~~AI~YCHq-LHVVHRDLKPENVVFFEKlGlVKLTDFGFSN 167 (864)
T KOG4717|consen 92 LYLILELGDGGDLFDYIMK---HEEGLNEDLAKKYFAQIVHAISYCHQ-LHVVHRDLKPENVVFFEKLGLVKLTDFGFSN 167 (864)
T ss_pred EEEEEEecCCchHHHHHHh---hhccccHHHHHHHHHHHHHHHHHHhh-hhhhcccCCcceeEEeeecCceEeeeccccc
Confidence 9999999986 66665443 35678999999999999999999998 8999999999999876665589999999999
Q ss_pred ccCCCCCCccceeccCccCchhhcCCCCCCcchhhHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCCHHHHhhcC
Q 011138 289 MLVPGEPNISYICSRYYRAPELIFGATEYTTAIDMWSIGCVLAELLLGQPLFPGESGVDQLVEIIKILGTPTREEIKCMN 368 (492)
Q Consensus 289 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DvwSlGvil~ell~G~~pf~~~~~~~~~~~i~~~~g~p~~~~~~~~~ 368 (492)
.+.++....+.||+..|-|||+++|..+..+++||||||||||.|++|++||+..++.+.+-.|+.+
T Consensus 168 kf~PG~kL~TsCGSLAYSAPEILLGDsYDAPAVDiWSLGVILyMLVCGq~PFqeANDSETLTmImDC------------- 234 (864)
T KOG4717|consen 168 KFQPGKKLTTSCGSLAYSAPEILLGDSYDAPAVDIWSLGVILYMLVCGQPPFQEANDSETLTMIMDC------------- 234 (864)
T ss_pred cCCCcchhhcccchhhccCchhhhcCccCCcchhhhHHHHHHHHHHhCCCccccccchhhhhhhhcc-------------
Confidence 9999999999999999999999999998888999999999999999999999999999999998773
Q ss_pred CCCcccCCCcccCCCcccccCCCCChhHhhhhccccccCCCCcCCHHHhhCCCCCCCCCCC
Q 011138 369 PNYTEFKFPQIKAHPWHKIFHKRMPPEALDLVSRLLQYSPSLRCTALEACAHPFFDDLRDP 429 (492)
Q Consensus 369 ~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~Li~~~L~~dP~~R~t~~e~l~Hp~f~~~~~~ 429 (492)
.+.+| ..++.+++|||.+||+.||.+|.+.++|..|+|++....+
T Consensus 235 ----KYtvP------------shvS~eCrdLI~sMLvRdPkkRAslEeI~s~~Wlq~~D~~ 279 (864)
T KOG4717|consen 235 ----KYTVP------------SHVSKECRDLIQSMLVRDPKKRASLEEIVSTSWLQAGDRG 279 (864)
T ss_pred ----cccCc------------hhhhHHHHHHHHHHHhcCchhhccHHHHhccccccCCCCC
Confidence 33333 4689999999999999999999999999999999987543
No 40
>cd07872 STKc_PCTAIRE2 Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-2 kinase. Serine/Threonine Kinases (STKs), PCTAIRE-2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-2 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-2 is specifically expressed in neurons in the central nervous system, mainly in terminally differentiated neurons. It associates with Trap (Tudor repeat associator with PCTAIRE-2) and could play
Probab=100.00 E-value=2.7e-47 Score=378.15 Aligned_cols=280 Identities=33% Similarity=0.639 Sum_probs=229.5
Q ss_pred cceeEeeeeccCCceEEEEEEEcCCCCEEEEEEeccch-----hhHHHHHHHHHHcCCCCccccceeeeeccCCCceEEE
Q 011138 137 ISYMAERVVGTGSFGVVFQAKCLETGDSVAIKKVLQDK-----RYKNRELQIMRLLNHPNVVSLKHCFFSTTEKDELYLN 211 (492)
Q Consensus 137 ~~y~~~~~lG~G~fg~Vy~~~~~~~g~~vAiK~~~~~~-----~~~~~E~~il~~l~h~nIv~l~~~~~~~~~~~~~~~~ 211 (492)
..|.+.+.||+|+||.||+|.+..+++.||+|.+.... ....+|+.+++.++||||+++++++. .....+
T Consensus 6 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~-----~~~~~~ 80 (309)
T cd07872 6 ETYIKLEKLGEGTYATVFKGRSKLTENLVALKEIRLEHEEGAPCTAIREVSLLKDLKHANIVTLHDIVH-----TDKSLT 80 (309)
T ss_pred CceEEEEEecccCCEEEEEEEecCCCCeEEEEEeeccccCCcchhHHHHHHHHHhCCCCCcceEEEEEe-----eCCeEE
Confidence 46999999999999999999999999999999885322 23457999999999999999999883 344689
Q ss_pred EEeeechhhHHHHhhhhhhcCCCcCHHHHHHHHHHHHHHHHHHHhhCCcccCCCCCCceEEcCCCCcEEEeeecCccccC
Q 011138 212 LVLEYISETVYRVSKHYTRMNQHVPILYVQLYTYQICRALNYLHHVVGVCHRDIKPQNLLVNPHTHQLKICDFGSAKMLV 291 (492)
Q Consensus 212 lV~E~~~~~l~~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~yLH~~~givHrDlKp~NILl~~~~~~vkL~DFG~a~~~~ 291 (492)
+||||+++++...+.. ....+++..++.++.||+.||.|||+ +||+||||||+|||++.++ .+||+|||++....
T Consensus 81 lv~e~~~~~l~~~~~~---~~~~~~~~~~~~~~~qi~~aL~~lH~-~~ivH~dlkp~Nill~~~~-~~kl~Dfg~~~~~~ 155 (309)
T cd07872 81 LVFEYLDKDLKQYMDD---CGNIMSMHNVKIFLYQILRGLAYCHR-RKVLHRDLKPQNLLINERG-ELKLADFGLARAKS 155 (309)
T ss_pred EEEeCCCCCHHHHHHh---cCCCCCHHHHHHHHHHHHHHHHHHHH-CCeecCCCCHHHEEECCCC-CEEECccccceecC
Confidence 9999999877765432 23457888999999999999999997 9999999999999999887 79999999987543
Q ss_pred CCC-CCccceeccCccCchhhcCCCCCCcchhhHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCCHHHHhhcCC-
Q 011138 292 PGE-PNISYICSRYYRAPELIFGATEYTTAIDMWSIGCVLAELLLGQPLFPGESGVDQLVEIIKILGTPTREEIKCMNP- 369 (492)
Q Consensus 292 ~~~-~~~~~~gt~~y~aPE~~~~~~~~~~~~DvwSlGvil~ell~G~~pf~~~~~~~~~~~i~~~~g~p~~~~~~~~~~- 369 (492)
... ......+|+.|+|||++.+...++.++|||||||++|+|++|++||.+.+..+.+..+.+.++.|....+.....
T Consensus 156 ~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~el~tg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 235 (309)
T cd07872 156 VPTKTYSNEVVTLWYRPPDVLLGSSEYSTQIDMWGVGCIFFEMASGRPLFPGSTVEDELHLIFRLLGTPTEETWPGISSN 235 (309)
T ss_pred CCccccccccccccccCCHHHhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCCHHHHhhhcch
Confidence 222 223457899999999987766789999999999999999999999999999999999999999998887765432
Q ss_pred -CCcccCCCcccCCCcccccCCCCChhHhhhhccccccCCCCcCCHHHhhCCCCCCCCC
Q 011138 370 -NYTEFKFPQIKAHPWHKIFHKRMPPEALDLVSRLLQYSPSLRCTALEACAHPFFDDLR 427 (492)
Q Consensus 370 -~~~~~~~~~~~~~~~~~~~~~~~s~~~~~Li~~~L~~dP~~R~t~~e~l~Hp~f~~~~ 427 (492)
.+..+.++.....++.. ....+++++++||.+||+.||.+|||+.|+++||||+.+.
T Consensus 236 ~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~li~~~L~~dp~~R~t~~e~l~h~~~~~~~ 293 (309)
T cd07872 236 DEFKNYNFPKYKPQPLIN-HAPRLDTEGIELLTKFLQYESKKRISAEEAMKHAYFRSLG 293 (309)
T ss_pred hhhhhhhcCccCCCchhh-hccCCCHHHHHHHHHhccCChhhCCCHHHHhcChhhhhcc
Confidence 12223333332222222 2245789999999999999999999999999999999865
No 41
>KOG0582 consensus Ste20-like serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=1.3e-47 Score=370.74 Aligned_cols=272 Identities=25% Similarity=0.427 Sum_probs=220.4
Q ss_pred CCCCccccceeEeeeeccCCceEEEEEEEcCCCCEEEEEEeccc-----hhhHHHHHHHHHHcCCCCccccceeeeeccC
Q 011138 130 NGQPKQTISYMAERVVGTGSFGVVFQAKCLETGDSVAIKKVLQD-----KRYKNRELQIMRLLNHPNVVSLKHCFFSTTE 204 (492)
Q Consensus 130 ~~~~~~~~~y~~~~~lG~G~fg~Vy~~~~~~~g~~vAiK~~~~~-----~~~~~~E~~il~~l~h~nIv~l~~~~~~~~~ 204 (492)
...+.....|.+..+||.|.-++||+|++..+++.||||++.-+ -..+.+|+..|+.++||||++++.+|..
T Consensus 19 ~~~p~n~~~YeL~e~IG~G~sa~V~~A~c~p~~e~VAIK~inLEkc~~~ld~l~kE~~~msl~~HPNIv~~~~sFvv--- 95 (516)
T KOG0582|consen 19 KEFPLNAKDYELQEVIGVGASAVVYLARCIPTNEVVAIKIINLEKCNNDLDALRKEVQTMSLIDHPNIVTYHCSFVV--- 95 (516)
T ss_pred ccCCCCccceeEEEEEeccceeEeeeeeecccCCEEEEEEeehhhhhhhHHHHHHHHHHhhhcCCCCcceEEEEEEe---
Confidence 34555666899999999999999999999999999999998543 2556789999999999999999999944
Q ss_pred CCceEEEEEeeech-hhHHHHhhhhhhcCCCcCHHHHHHHHHHHHHHHHHHHhhCCcccCCCCCCceEEcCCCCcEEEee
Q 011138 205 KDELYLNLVLEYIS-ETVYRVSKHYTRMNQHVPILYVQLYTYQICRALNYLHHVVGVCHRDIKPQNLLVNPHTHQLKICD 283 (492)
Q Consensus 205 ~~~~~~~lV~E~~~-~~l~~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~yLH~~~givHrDlKp~NILl~~~~~~vkL~D 283 (492)
+..+|+||.||. |+++++++.+.. ..+.+..+..|++++++||.|||+ +|.||||||+.||||+.+| .|||+|
T Consensus 96 --~~~LWvVmpfMa~GS~ldIik~~~~--~Gl~E~~Ia~iLre~LkaL~YLH~-~G~IHRdvKAgnILi~~dG-~VkLad 169 (516)
T KOG0582|consen 96 --DSELWVVMPFMAGGSLLDIIKTYYP--DGLEEASIATILREVLKALDYLHQ-NGHIHRDVKAGNILIDSDG-TVKLAD 169 (516)
T ss_pred --cceeEEeehhhcCCcHHHHHHHHcc--ccccHHHHHHHHHHHHHHHHHHHh-cCceecccccccEEEcCCC-cEEEcC
Confidence 345999999998 567777765543 559999999999999999999997 9999999999999999998 899999
Q ss_pred ecCccccCCCCC-----CccceeccCccCchhh-cCCCCCCcchhhHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhC
Q 011138 284 FGSAKMLVPGEP-----NISYICSRYYRAPELI-FGATEYTTAIDMWSIGCVLAELLLGQPLFPGESGVDQLVEIIKILG 357 (492)
Q Consensus 284 FG~a~~~~~~~~-----~~~~~gt~~y~aPE~~-~~~~~~~~~~DvwSlGvil~ell~G~~pf~~~~~~~~~~~i~~~~g 357 (492)
||.+-.+..... ..+++||++|||||++ .....|+.|+||||||++..||.+|+.||......+.+..-++ +
T Consensus 170 Fgvsa~l~~~G~R~~~rf~tfvgtp~wmAPEvl~q~~~GYdfKaDIwSfGITA~ELA~G~aPf~k~pPmkvLl~tLq--n 247 (516)
T KOG0582|consen 170 FGVSASLFDSGDRQVTRFNTFVGTPCWMAPEVLMQQLHGYDFKADIWSFGITACELAHGHAPFSKYPPMKVLLLTLQ--N 247 (516)
T ss_pred ceeeeeecccCceeeEeeccccCcccccChHHhhhcccCccchhhhhhhhHHHHHHhcCCCCcccCChHHHHHHHhc--C
Confidence 998765543221 1456899999999995 3445699999999999999999999999998877665554333 3
Q ss_pred CCCHHHHhhcCCCCcccCCCcccCCCcccccCCCCChhHhhhhccccccCCCCcCCHHHhhCCCCCCCCCCC
Q 011138 358 TPTREEIKCMNPNYTEFKFPQIKAHPWHKIFHKRMPPEALDLVSRLLQYSPSLRCTALEACAHPFFDDLRDP 429 (492)
Q Consensus 358 ~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~Li~~~L~~dP~~R~t~~e~l~Hp~f~~~~~~ 429 (492)
.|+.... ........+..+..++.+|..||++||.+|||++++|.|+||+..+..
T Consensus 248 ~pp~~~t-----------------~~~~~d~~k~~~ksf~e~i~~CL~kDP~kRptAskLlkh~FFk~~k~~ 302 (516)
T KOG0582|consen 248 DPPTLLT-----------------SGLDKDEDKKFSKSFREMIALCLVKDPSKRPTASKLLKHAFFKKAKSK 302 (516)
T ss_pred CCCCccc-----------------ccCChHHhhhhcHHHHHHHHHHhhcCcccCCCHHHHhccHHHhhccch
Confidence 4432110 001111123467789999999999999999999999999999987653
No 42
>cd07875 STKc_JNK1 Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 1. Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 1 (JNK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK1, like JNK2, is expressed in every cell and tissue type. Initially it was thought that JNK1 and JNK2 were functionally redundant as mice deficient in either genes (Jn
Probab=100.00 E-value=5.6e-47 Score=384.65 Aligned_cols=287 Identities=32% Similarity=0.559 Sum_probs=229.1
Q ss_pred cceeEeeeeccCCceEEEEEEEcCCCCEEEEEEeccc------hhhHHHHHHHHHHcCCCCccccceeeeeccC-CCceE
Q 011138 137 ISYMAERVVGTGSFGVVFQAKCLETGDSVAIKKVLQD------KRYKNRELQIMRLLNHPNVVSLKHCFFSTTE-KDELY 209 (492)
Q Consensus 137 ~~y~~~~~lG~G~fg~Vy~~~~~~~g~~vAiK~~~~~------~~~~~~E~~il~~l~h~nIv~l~~~~~~~~~-~~~~~ 209 (492)
.+|.+.+.||+|+||.||+|.+..+++.||||++... .....+|+.+++.++||||+++++++..... .....
T Consensus 24 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~ii~~~~~~~~~~~~~~~~~ 103 (364)
T cd07875 24 KRYQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIIGLLNVFTPQKSLEEFQD 103 (364)
T ss_pred cceeEEEEeecCCCeEEEEEEECCCCcEEEEEEeCccccCchhHHHHHHHHHHHHhcCCCCccccceeecccccccccCe
Confidence 4699999999999999999999999999999988542 1234579999999999999999998744321 23345
Q ss_pred EEEEeeechhhHHHHhhhhhhcCCCcCHHHHHHHHHHHHHHHHHHHhhCCcccCCCCCCceEEcCCCCcEEEeeecCccc
Q 011138 210 LNLVLEYISETVYRVSKHYTRMNQHVPILYVQLYTYQICRALNYLHHVVGVCHRDIKPQNLLVNPHTHQLKICDFGSAKM 289 (492)
Q Consensus 210 ~~lV~E~~~~~l~~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~yLH~~~givHrDlKp~NILl~~~~~~vkL~DFG~a~~ 289 (492)
+|+||||+++++...+. ..++...+..++.||+.||.|||+ +||+||||||+|||++.++ .+||+|||+++.
T Consensus 104 ~~lv~e~~~~~l~~~~~------~~~~~~~~~~~~~qi~~aL~~LH~-~~ivH~Dlkp~NIll~~~~-~~kL~DfG~a~~ 175 (364)
T cd07875 104 VYIVMELMDANLCQVIQ------MELDHERMSYLLYQMLCGIKHLHS-AGIIHRDLKPSNIVVKSDC-TLKILDFGLART 175 (364)
T ss_pred EEEEEeCCCCCHHHHHH------hcCCHHHHHHHHHHHHHHHHHHhh-CCeecCCCCHHHEEECCCC-cEEEEeCCCccc
Confidence 78999999988776542 247788889999999999999997 9999999999999999887 799999999986
Q ss_pred cCCCCCCccceeccCccCchhhcCCCCCCcchhhHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCCHHHHhhcCC
Q 011138 290 LVPGEPNISYICSRYYRAPELIFGATEYTTAIDMWSIGCVLAELLLGQPLFPGESGVDQLVEIIKILGTPTREEIKCMNP 369 (492)
Q Consensus 290 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DvwSlGvil~ell~G~~pf~~~~~~~~~~~i~~~~g~p~~~~~~~~~~ 369 (492)
...........||+.|+|||++.+. .++.++|||||||++|+|++|+.||.+.+..+.+..++..++.|..+.+....+
T Consensus 176 ~~~~~~~~~~~~t~~y~aPE~~~~~-~~~~~~DiwSlG~il~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 254 (364)
T cd07875 176 AGTSFMMTPYVVTRYYRAPEVILGM-GYKENVDIWSVGCIMGEMIKGGVLFPGTDHIDQWNKVIEQLGTPCPEFMKKLQP 254 (364)
T ss_pred cCCCCcccCCcccCCcCCHHHHhCC-CCCchhhHHhHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhcCCCCHHHHHhhhH
Confidence 6444444566899999999999764 489999999999999999999999999999999999999999888765544322
Q ss_pred ----------CCcccCCCcc---cCCCcccccCCCCChhHhhhhccccccCCCCcCCHHHhhCCCCCCCCCCCCCC
Q 011138 370 ----------NYTEFKFPQI---KAHPWHKIFHKRMPPEALDLVSRLLQYSPSLRCTALEACAHPFFDDLRDPNTC 432 (492)
Q Consensus 370 ----------~~~~~~~~~~---~~~~~~~~~~~~~s~~~~~Li~~~L~~dP~~R~t~~e~l~Hp~f~~~~~~~~~ 432 (492)
.+..+.+... ...++........+.++++||.+||+.||.+|||+.|+|+||||..+.++...
T Consensus 255 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dll~~mL~~dP~~R~t~~e~L~hp~~~~~~~~~~~ 330 (364)
T cd07875 255 TVRTYVENRPKYAGYSFEKLFPDVLFPADSEHNKLKASQARDLLSKMLVIDASKRISVDEALQHPYINVWYDPSEA 330 (364)
T ss_pred HHHHHHhhCCCcCCCChHhhCccccccccccccccccHHHHHHHHHhcCcCcccCCCHHHHhcCcccccccCcccC
Confidence 1111111110 00111122223356789999999999999999999999999999987765443
No 43
>cd07876 STKc_JNK2 Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 2. Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 2 (JNK2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK1, like JNK2, is expressed in every cell and tissue type. Initially it was thought that JNK1 and JNK2 were functionally redundant as mice deficient in either genes (Jn
Probab=100.00 E-value=4.2e-47 Score=384.82 Aligned_cols=284 Identities=32% Similarity=0.565 Sum_probs=225.4
Q ss_pred cceeEeeeeccCCceEEEEEEEcCCCCEEEEEEeccc------hhhHHHHHHHHHHcCCCCccccceeeeeccC-CCceE
Q 011138 137 ISYMAERVVGTGSFGVVFQAKCLETGDSVAIKKVLQD------KRYKNRELQIMRLLNHPNVVSLKHCFFSTTE-KDELY 209 (492)
Q Consensus 137 ~~y~~~~~lG~G~fg~Vy~~~~~~~g~~vAiK~~~~~------~~~~~~E~~il~~l~h~nIv~l~~~~~~~~~-~~~~~ 209 (492)
.+|.+.+.||+|+||.||+|.+..+|+.||||++... .....+|+.+++.++||||++++++|..... .....
T Consensus 21 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~ 100 (359)
T cd07876 21 KRYQQLKPIGSGAQGIVCAAFDTVLGINVAVKKLSRPFQNQTHAKRAYRELVLLKCVNHKNIISLLNVFTPQKSLEEFQD 100 (359)
T ss_pred hceEEEEEeecCCCEEEEEEEEcCCCceeEEEEecccccchhHHHHHHHHHHHHHhCCCCCEeeeeeeeccCCCccccce
Confidence 4799999999999999999999999999999998532 2334579999999999999999998854332 22345
Q ss_pred EEEEeeechhhHHHHhhhhhhcCCCcCHHHHHHHHHHHHHHHHHHHhhCCcccCCCCCCceEEcCCCCcEEEeeecCccc
Q 011138 210 LNLVLEYISETVYRVSKHYTRMNQHVPILYVQLYTYQICRALNYLHHVVGVCHRDIKPQNLLVNPHTHQLKICDFGSAKM 289 (492)
Q Consensus 210 ~~lV~E~~~~~l~~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~yLH~~~givHrDlKp~NILl~~~~~~vkL~DFG~a~~ 289 (492)
+|+||||+++++...+. ..++...+..++.||+.||.|||+ +||+||||||+|||++.++ .+||+|||+++.
T Consensus 101 ~~lv~e~~~~~l~~~~~------~~~~~~~~~~~~~qi~~~L~~LH~-~~ivHrDlkp~NIl~~~~~-~~kl~Dfg~a~~ 172 (359)
T cd07876 101 VYLVMELMDANLCQVIH------MELDHERMSYLLYQMLCGIKHLHS-AGIIHRDLKPSNIVVKSDC-TLKILDFGLART 172 (359)
T ss_pred eEEEEeCCCcCHHHHHh------ccCCHHHHHHHHHHHHHHHHHHHh-CCcccCCCCHHHEEECCCC-CEEEecCCCccc
Confidence 78999999988766432 347788899999999999999997 9999999999999999887 799999999976
Q ss_pred cCCCCCCccceeccCccCchhhcCCCCCCcchhhHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCCHHHHhhc--
Q 011138 290 LVPGEPNISYICSRYYRAPELIFGATEYTTAIDMWSIGCVLAELLLGQPLFPGESGVDQLVEIIKILGTPTREEIKCM-- 367 (492)
Q Consensus 290 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DvwSlGvil~ell~G~~pf~~~~~~~~~~~i~~~~g~p~~~~~~~~-- 367 (492)
...........||+.|+|||++.+. .++.++|||||||++|+|++|+.||.+.+..+....+++.++.|..+.+...
T Consensus 173 ~~~~~~~~~~~~t~~y~aPE~~~~~-~~~~~~DiwSlG~il~el~tg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 251 (359)
T cd07876 173 ACTNFMMTPYVVTRYYRAPEVILGM-GYKENVDIWSVGCIMGELVKGSVIFQGTDHIDQWNKVIEQLGTPSAEFMNRLQP 251 (359)
T ss_pred cccCccCCCCcccCCCCCchhccCC-CCCcchhhHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhcCCCcHHHHHHHHH
Confidence 5444444567889999999999664 4899999999999999999999999999988888889998888876543321
Q ss_pred --------CCCCcccCCCcccCCCc----ccccCCCCChhHhhhhccccccCCCCcCCHHHhhCCCCCCCCCCCC
Q 011138 368 --------NPNYTEFKFPQIKAHPW----HKIFHKRMPPEALDLVSRLLQYSPSLRCTALEACAHPFFDDLRDPN 430 (492)
Q Consensus 368 --------~~~~~~~~~~~~~~~~~----~~~~~~~~s~~~~~Li~~~L~~dP~~R~t~~e~l~Hp~f~~~~~~~ 430 (492)
.+.+....+...- ..| ........++++++||.+||+.||++|||+.|+|+||||+.+.++.
T Consensus 252 ~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~li~~mL~~dP~~R~t~~e~l~hp~~~~~~~~~ 325 (359)
T cd07876 252 TVRNYVENRPQYPGISFEELF-PDWIFPSESERDKLKTSQARDLLSKMLVIDPDKRISVDEALRHPYITVWYDPA 325 (359)
T ss_pred HHHHHHhhCCCCCCcchhhhc-cccccccccccccccchhHHHHHHHHhccCcccCCCHHHHhcCchhhhhcCcc
Confidence 1111111111100 000 0112234578899999999999999999999999999999776654
No 44
>cd07863 STKc_CDK4 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 4. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 4 (CDK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK4 partners with all three D-type cyclins (D1, D2, and D3) and is also regulated by INK4 inhibitors. It is active towards the retinoblastoma (pRb) protein and plays a role in regulating the early G1 phase of the cell cycle. It is expressed ubiquitou
Probab=100.00 E-value=8.2e-47 Score=370.35 Aligned_cols=279 Identities=29% Similarity=0.527 Sum_probs=222.4
Q ss_pred ceeEeeeeccCCceEEEEEEEcCCCCEEEEEEeccch------hhHHHHHHHHHHc---CCCCccccceeeeeccCCCce
Q 011138 138 SYMAERVVGTGSFGVVFQAKCLETGDSVAIKKVLQDK------RYKNRELQIMRLL---NHPNVVSLKHCFFSTTEKDEL 208 (492)
Q Consensus 138 ~y~~~~~lG~G~fg~Vy~~~~~~~g~~vAiK~~~~~~------~~~~~E~~il~~l---~h~nIv~l~~~~~~~~~~~~~ 208 (492)
+|.+.+.||+|+||+||+|.++.+|+.||+|.+.... ....+|+.+++.+ +||||+++++++.........
T Consensus 1 ~y~~~~~lg~g~~g~v~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~h~ni~~~~~~~~~~~~~~~~ 80 (288)
T cd07863 1 QYEPVAEIGVGAYGTVYKARDPHSGHFVALKSVRVQTNEDGLPLSTVREVALLKRLEAFDHPNIVRLMDVCATSRTDRET 80 (288)
T ss_pred CceEeeEEeecCCeEEEEEEECCCCcEEEEEEeccCcCCCCCchHHHHHHHHHHHhhhcCCCCeeeeeeeeccccCCCCc
Confidence 4899999999999999999999999999999885321 2344677777765 699999999988655444456
Q ss_pred EEEEEeeechhhHHHHhhhhhhcCCCcCHHHHHHHHHHHHHHHHHHHhhCCcccCCCCCCceEEcCCCCcEEEeeecCcc
Q 011138 209 YLNLVLEYISETVYRVSKHYTRMNQHVPILYVQLYTYQICRALNYLHHVVGVCHRDIKPQNLLVNPHTHQLKICDFGSAK 288 (492)
Q Consensus 209 ~~~lV~E~~~~~l~~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~yLH~~~givHrDlKp~NILl~~~~~~vkL~DFG~a~ 288 (492)
.+++||||+.+++...+... ....+++..++.++.||+.||.|||+ +||+||||||+|||++.++ .+||+|||++.
T Consensus 81 ~~~lv~e~~~~~l~~~~~~~--~~~~~~~~~~~~~~~qi~~al~~lH~-~~ivH~dikp~Nili~~~~-~~kl~dfg~~~ 156 (288)
T cd07863 81 KVTLVFEHVDQDLRTYLDKV--PPPGLPAETIKDLMRQFLRGLDFLHA-NCIVHRDLKPENILVTSGG-QVKLADFGLAR 156 (288)
T ss_pred eEEEEEcccccCHHHHHHhc--CCCCCCHHHHHHHHHHHHHHHHHHHh-CCeecCCCCHHHEEECCCC-CEEECccCccc
Confidence 78999999998777655432 23458999999999999999999997 9999999999999999887 79999999998
Q ss_pred ccCCCCCCccceeccCccCchhhcCCCCCCcchhhHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCCHHHHhhcC
Q 011138 289 MLVPGEPNISYICSRYYRAPELIFGATEYTTAIDMWSIGCVLAELLLGQPLFPGESGVDQLVEIIKILGTPTREEIKCMN 368 (492)
Q Consensus 289 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DvwSlGvil~ell~G~~pf~~~~~~~~~~~i~~~~g~p~~~~~~~~~ 368 (492)
............||..|+|||++.+. .++.++|||||||++|+|++|.+||.+....+.+.++....+.+....+....
T Consensus 157 ~~~~~~~~~~~~~~~~y~aPE~~~~~-~~~~~~DiwslG~~l~~l~~g~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 235 (288)
T cd07863 157 IYSCQMALTPVVVTLWYRAPEVLLQS-TYATPVDMWSVGCIFAEMFRRKPLFCGNSEADQLGKIFDLIGLPPEDDWPRDV 235 (288)
T ss_pred cccCcccCCCccccccccCchHhhCC-CCCCcchhhhHHHHHHHHHhCCcCcCCCCHHHHHHHHHHHhCCCChhhCcccc
Confidence 76544444456789999999999654 48999999999999999999999999998888999999988887766554211
Q ss_pred CCCcccCCCcccCCCcccccCCCCChhHhhhhccccccCCCCcCCHHHhhCCCCC
Q 011138 369 PNYTEFKFPQIKAHPWHKIFHKRMPPEALDLVSRLLQYSPSLRCTALEACAHPFF 423 (492)
Q Consensus 369 ~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~Li~~~L~~dP~~R~t~~e~l~Hp~f 423 (492)
. .....+.......+. .+.+.+++++.+||.+||++||.+|||+.|++.||||
T Consensus 236 ~-~~~~~~~~~~~~~~~-~~~~~~~~~~~~li~~~L~~dP~~R~t~~~~l~hp~f 288 (288)
T cd07863 236 T-LPRGAFSPRGPRPVQ-SVVPEIEESGAQLLLEMLTFNPHKRISAFRALQHPFF 288 (288)
T ss_pred c-ccccccCCCCCCchH-HhCcCcCHHHHHHHHHHhccCcccCCCHHHHhcCCCC
Confidence 0 001111111111111 1224578899999999999999999999999999998
No 45
>cd07853 STKc_NLK Catalytic domain of the Serine/Threonine Kinase, Nemo-Like Kinase. Serine/Threonine Kinases (STKs), Nemo-Like Kinase (NLK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NLK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Mitogen-activated protein kinases (MAPKs) are important mediators of cellular responses to extracellular signals. NLK is an atypical MAPK that is not regulated by a MAPK kinase. It functions downstream of the MAPK kinase kinase Tak1, which also plays a role in activating the JNK and p38 MAPKs. The Tak1/NLK pathways are regulated by Wnts, a family of secreted proteins that is critical in the control of asymmetric division and cell polarity. NLK can phosphorylate transcription
Probab=100.00 E-value=3.2e-47 Score=387.54 Aligned_cols=280 Identities=36% Similarity=0.595 Sum_probs=225.2
Q ss_pred eeEeeeeccCCceEEEEEEEcCCCCEEEEEEeccc------hhhHHHHHHHHHHcCCCCccccceeeeeccCCCceEEEE
Q 011138 139 YMAERVVGTGSFGVVFQAKCLETGDSVAIKKVLQD------KRYKNRELQIMRLLNHPNVVSLKHCFFSTTEKDELYLNL 212 (492)
Q Consensus 139 y~~~~~lG~G~fg~Vy~~~~~~~g~~vAiK~~~~~------~~~~~~E~~il~~l~h~nIv~l~~~~~~~~~~~~~~~~l 212 (492)
|.+.+.||+|+||.||+|.+..+|+.||||++... .....+|+.+++.++||||+++++++..........+|+
T Consensus 2 ~~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~l 81 (372)
T cd07853 2 VEPDRPIGYGAFGVVWSVTDPRDGKRVALKKMPNVFQNLVSCKRVFRELKMLCFFKHDNVLSALDILQPPHIDPFEEIYV 81 (372)
T ss_pred CcccceeeeCCCEEEEEEEECCCCCEEEEEeccccccchHHHHHHHHHHHHHHhCCCCCcCCHhheecCCCccccceEEE
Confidence 77889999999999999999999999999987532 123457999999999999999999885443222336899
Q ss_pred EeeechhhHHHHhhhhhhcCCCcCHHHHHHHHHHHHHHHHHHHhhCCcccCCCCCCceEEcCCCCcEEEeeecCccccCC
Q 011138 213 VLEYISETVYRVSKHYTRMNQHVPILYVQLYTYQICRALNYLHHVVGVCHRDIKPQNLLVNPHTHQLKICDFGSAKMLVP 292 (492)
Q Consensus 213 V~E~~~~~l~~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~yLH~~~givHrDlKp~NILl~~~~~~vkL~DFG~a~~~~~ 292 (492)
||||+.+++...+.. ...+++..++.++.||+.||.|||+ +||+||||||+|||++.++ .+||+|||+++....
T Consensus 82 v~e~~~~~l~~~~~~----~~~l~~~~~~~~~~qi~~aL~~LH~-~~ivH~dlkp~Nili~~~~-~~kL~Dfg~a~~~~~ 155 (372)
T cd07853 82 VTELMQSDLHKIIVS----PQPLSSDHVKVFLYQILRGLKYLHS-AGILHRDIKPGNLLVNSNC-VLKICDFGLARVEEP 155 (372)
T ss_pred EeeccccCHHHHHhc----CCCCCHHHHHHHHHHHHHHHHHHHh-CCeeCCCCChHHEEECCCC-CEEeccccceeeccc
Confidence 999999877665432 4568899999999999999999997 9999999999999999887 899999999976533
Q ss_pred CC--CCccceeccCccCchhhcCCCCCCcchhhHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCCHHHHhhcCCC
Q 011138 293 GE--PNISYICSRYYRAPELIFGATEYTTAIDMWSIGCVLAELLLGQPLFPGESGVDQLVEIIKILGTPTREEIKCMNPN 370 (492)
Q Consensus 293 ~~--~~~~~~gt~~y~aPE~~~~~~~~~~~~DvwSlGvil~ell~G~~pf~~~~~~~~~~~i~~~~g~p~~~~~~~~~~~ 370 (492)
.. ......+|+.|+|||++.+...++.++|||||||++|||++|++||.+.+..+++..+...+|.|+.+.+......
T Consensus 156 ~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~i~~~~g~~~~~~~~~~~~~ 235 (372)
T cd07853 156 DESKHMTQEVVTQYYRAPEILMGSRHYTSAVDIWSVGCIFAELLGRRILFQAQSPIQQLDLITDLLGTPSLEAMRSACEG 235 (372)
T ss_pred CccccCCCCCcCCCcCCHHHHcCCCCCCcHHHHHhHHHHHHHHHcCCCCCCCCCHHHHHHHHHHHcCCCCHHHHHHhhHH
Confidence 22 2234578999999999987667899999999999999999999999999999999999999999988765432110
Q ss_pred Cc------ccCCCcccCCCcccccCCCCChhHhhhhccccccCCCCcCCHHHhhCCCCCCCCC
Q 011138 371 YT------EFKFPQIKAHPWHKIFHKRMPPEALDLVSRLLQYSPSLRCTALEACAHPFFDDLR 427 (492)
Q Consensus 371 ~~------~~~~~~~~~~~~~~~~~~~~s~~~~~Li~~~L~~dP~~R~t~~e~l~Hp~f~~~~ 427 (492)
.. ....+.. .....+....++++.+||.+||+.||.+|||+.|+++||||+..+
T Consensus 236 ~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~li~~mL~~dP~~R~t~~e~l~hp~~~~~~ 295 (372)
T cd07853 236 ARAHILRGPHKPPSL---PVLYTLSSQATHEAVHLLCRMLVFDPDKRISAADALAHPYLDEGR 295 (372)
T ss_pred HHHHHHhCCCCCCch---HHhcccCCCCCHHHHHHHHHhCCCChhhCcCHHHHhcCHhhCCCc
Confidence 00 0000100 000012345688999999999999999999999999999999854
No 46
>cd05612 STKc_PRKX_like Catalytic domain of PRKX-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), cAMP-dependent protein kinase (PKA) subfamily, PRKX-like kinases, catalytic (c) subunit. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKA subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include human PRKX (X chromosome-encoded protein kinase), Drosophila DC2, and similar proteins. PRKX is present in many tissues including fetal and adult brain, kidney, and lung. The PRKX gene is located in the Xp22.3 subregion and has a homolog called PRKY on the Y chromosome. An abnormal interchange between PRKX aand PRKY leads to the sex reversal disorder of XX males and XY females. PRKX is implicated in granulocyt
Probab=100.00 E-value=3.7e-47 Score=374.02 Aligned_cols=248 Identities=25% Similarity=0.408 Sum_probs=207.1
Q ss_pred ceeEeeeeccCCceEEEEEEEcCCCCEEEEEEeccc-------hhhHHHHHHHHHHcCCCCccccceeeeeccCCCceEE
Q 011138 138 SYMAERVVGTGSFGVVFQAKCLETGDSVAIKKVLQD-------KRYKNRELQIMRLLNHPNVVSLKHCFFSTTEKDELYL 210 (492)
Q Consensus 138 ~y~~~~~lG~G~fg~Vy~~~~~~~g~~vAiK~~~~~-------~~~~~~E~~il~~l~h~nIv~l~~~~~~~~~~~~~~~ 210 (492)
+|.+.+.||+|+||.||+|.+..+|+.||||++... .....+|+.+++.++||||+++++++ .+..++
T Consensus 2 ~y~~~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~-----~~~~~~ 76 (291)
T cd05612 2 DLERIKTVGTGTFGRVHLVRDRISEHYYALKVMAIPEVIRLKQEQHVHNEKRVLKEVSHPFIIRLFWTE-----HDQRFL 76 (291)
T ss_pred CceeeeeeecCCCeEEEEEEEcCCCCEEEEEEEEHHHHhhhHHHHHHHHHHHHHHhCCCCcHhhhHhhh-----ccCCeE
Confidence 589999999999999999999999999999988532 22345799999999999999999887 555679
Q ss_pred EEEeeechhh-HHHHhhhhhhcCCCcCHHHHHHHHHHHHHHHHHHHhhCCcccCCCCCCceEEcCCCCcEEEeeecCccc
Q 011138 211 NLVLEYISET-VYRVSKHYTRMNQHVPILYVQLYTYQICRALNYLHHVVGVCHRDIKPQNLLVNPHTHQLKICDFGSAKM 289 (492)
Q Consensus 211 ~lV~E~~~~~-l~~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~yLH~~~givHrDlKp~NILl~~~~~~vkL~DFG~a~~ 289 (492)
|+||||+.++ +.+.+. ....+++..+..++.||+.||.|||+ +||+||||||+|||++.++ .+||+|||+++.
T Consensus 77 ~lv~e~~~~~~L~~~~~----~~~~~~~~~~~~~~~qi~~~l~~lH~-~~i~H~dlkp~NIli~~~~-~~kl~Dfg~~~~ 150 (291)
T cd05612 77 YMLMEYVPGGELFSYLR----NSGRFSNSTGLFYASEIVCALEYLHS-KEIVYRDLKPENILLDKEG-HIKLTDFGFAKK 150 (291)
T ss_pred EEEEeCCCCCCHHHHHH----HcCCCCHHHHHHHHHHHHHHHHHHHH-CCeeecCCCHHHeEECCCC-CEEEEecCcchh
Confidence 9999999865 444332 24568889999999999999999997 9999999999999999887 799999999986
Q ss_pred cCCCCCCccceeccCccCchhhcCCCCCCcchhhHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCCHHHHhhcCC
Q 011138 290 LVPGEPNISYICSRYYRAPELIFGATEYTTAIDMWSIGCVLAELLLGQPLFPGESGVDQLVEIIKILGTPTREEIKCMNP 369 (492)
Q Consensus 290 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DvwSlGvil~ell~G~~pf~~~~~~~~~~~i~~~~g~p~~~~~~~~~~ 369 (492)
... ......||+.|+|||++.+. .++.++|||||||++|+|++|..||.+.+..+....+...
T Consensus 151 ~~~--~~~~~~gt~~y~aPE~~~~~-~~~~~~DiwSlG~il~~l~~g~~pf~~~~~~~~~~~i~~~-------------- 213 (291)
T cd05612 151 LRD--RTWTLCGTPEYLAPEVIQSK-GHNKAVDWWALGILIYEMLVGYPPFFDDNPFGIYEKILAG-------------- 213 (291)
T ss_pred ccC--CcccccCChhhcCHHHHcCC-CCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhC--------------
Confidence 533 23346799999999998654 4899999999999999999999999988766655555431
Q ss_pred CCcccCCCcccCCCcccccCCCCChhHhhhhccccccCCCCcCC-----HHHhhCCCCCCCCCC
Q 011138 370 NYTEFKFPQIKAHPWHKIFHKRMPPEALDLVSRLLQYSPSLRCT-----ALEACAHPFFDDLRD 428 (492)
Q Consensus 370 ~~~~~~~~~~~~~~~~~~~~~~~s~~~~~Li~~~L~~dP~~R~t-----~~e~l~Hp~f~~~~~ 428 (492)
... ++..+++.+++||++||+.||.+|++ ++++++||||+.+..
T Consensus 214 ---~~~------------~~~~~~~~~~~li~~~l~~dp~~R~~~~~~~~~~~l~h~~~~~~~~ 262 (291)
T cd05612 214 ---KLE------------FPRHLDLYAKDLIKKLLVVDRTRRLGNMKNGADDVKNHRWFKSVDW 262 (291)
T ss_pred ---CcC------------CCccCCHHHHHHHHHHcCCCHHHccCCccCCHHHHhcCccccCCCH
Confidence 111 22346889999999999999999995 999999999987654
No 47
>KOG0611 consensus Predicted serine/threonine protein kinase [General function prediction only]
Probab=100.00 E-value=2.8e-48 Score=370.16 Aligned_cols=247 Identities=27% Similarity=0.454 Sum_probs=217.8
Q ss_pred cceeEeeeeccCCceEEEEEEEcCCCCEEEEEEeccch-------hhHHHHHHHHHHcCCCCccccceeeeeccCCCceE
Q 011138 137 ISYMAERVVGTGSFGVVFQAKCLETGDSVAIKKVLQDK-------RYKNRELQIMRLLNHPNVVSLKHCFFSTTEKDELY 209 (492)
Q Consensus 137 ~~y~~~~~lG~G~fg~Vy~~~~~~~g~~vAiK~~~~~~-------~~~~~E~~il~~l~h~nIv~l~~~~~~~~~~~~~~ 209 (492)
.+|++.+.||+|.||.|-+|.+...|+.||||.|.+++ ..+++|++||..|+||||+++|++| ++...
T Consensus 53 HRyE~~etLGkGTYGKVk~A~e~~sgR~VAiKsIrKdkIkdeqDlvhIRREIeIMSsLNHPhII~IyEVF-----ENkdK 127 (668)
T KOG0611|consen 53 HRYEITETLGKGTYGKVKLAYEHKSGREVAIKSIRKDKIKDEQDLVHIRREIEIMSSLNHPHIIQIYEVF-----ENKDK 127 (668)
T ss_pred hHHHHHHHhcCCcccceeehhhccCCcEeehhhhhhhhcccHHHHHHHHHHHHHHhhcCCCceeehhhhh-----cCCce
Confidence 46999999999999999999999999999999886653 2356899999999999999999999 55566
Q ss_pred EEEEeeechh-hHHHHhhhhhhcCCCcCHHHHHHHHHHHHHHHHHHHhhCCcccCCCCCCceEEcCCCCcEEEeeecCcc
Q 011138 210 LNLVLEYISE-TVYRVSKHYTRMNQHVPILYVQLYTYQICRALNYLHHVVGVCHRDIKPQNLLVNPHTHQLKICDFGSAK 288 (492)
Q Consensus 210 ~~lV~E~~~~-~l~~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~yLH~~~givHrDlKp~NILl~~~~~~vkL~DFG~a~ 288 (492)
+.|||||..+ .|++.+. ..+.+++.+++.+++||+.|+.|+|+ ++++|||||.+|||+|.++ ++||+|||++.
T Consensus 128 IvivMEYaS~GeLYDYiS----er~~LsErEaRhfFRQIvSAVhYCHk-nrVvHRDLKLENILLD~N~-NiKIADFGLSN 201 (668)
T KOG0611|consen 128 IVIVMEYASGGELYDYIS----ERGSLSEREARHFFRQIVSAVHYCHK-NRVVHRDLKLENILLDQNN-NIKIADFGLSN 201 (668)
T ss_pred EEEEEEecCCccHHHHHH----HhccccHHHHHHHHHHHHHHHHHHhh-ccceecccchhheeecCCC-Ceeeeccchhh
Confidence 8999999985 5665443 35779999999999999999999997 9999999999999999988 79999999999
Q ss_pred ccCCCCCCccceeccCccCchhhcCCCCCCcchhhHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCCHHHHhhcC
Q 011138 289 MLVPGEPNISYICSRYYRAPELIFGATEYTTAIDMWSIGCVLAELLLGQPLFPGESGVDQLVEIIKILGTPTREEIKCMN 368 (492)
Q Consensus 289 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DvwSlGvil~ell~G~~pf~~~~~~~~~~~i~~~~g~p~~~~~~~~~ 368 (492)
.+..+....++||+|.|.+||++.|..+-++.+|.|||||+||.|+.|..||+|.+....+.+|-..
T Consensus 202 ly~~~kfLqTFCGSPLYASPEIvNG~PY~GPEVDsWsLGvLLYtLVyGtMPFDG~Dhk~lvrQIs~G------------- 268 (668)
T KOG0611|consen 202 LYADKKFLQTFCGSPLYASPEIVNGTPYKGPEVDSWSLGVLLYTLVYGTMPFDGRDHKRLVRQISRG------------- 268 (668)
T ss_pred hhccccHHHHhcCCcccCCccccCCCCCCCCccchhhHHHHHHHHhhcccccCCchHHHHHHHhhcc-------------
Confidence 8888888889999999999999998888899999999999999999999999999887777666441
Q ss_pred CCCcccCCCcccCCCcccccCCCCChhHhhhhccccccCCCCcCCHHHhhCCCCCC
Q 011138 369 PNYTEFKFPQIKAHPWHKIFHKRMPPEALDLVSRLLQYSPSLRCTALEACAHPFFD 424 (492)
Q Consensus 369 ~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~Li~~~L~~dP~~R~t~~e~l~Hp~f~ 424 (492)
.+ +.+.-+.++.-||+.||-.||++|.|++++..|-|+.
T Consensus 269 ----aY-------------rEP~~PSdA~gLIRwmLmVNP~RRATieDiAsHWWvN 307 (668)
T KOG0611|consen 269 ----AY-------------REPETPSDASGLIRWMLMVNPERRATIEDIASHWWVN 307 (668)
T ss_pred ----cc-------------cCCCCCchHHHHHHHHHhcCcccchhHHHHhhhheee
Confidence 11 1133577899999999999999999999999998875
No 48
>cd07874 STKc_JNK3 Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 3. Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 3 (JNK3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK3 is expressed primarily in the brain, and to a lesser extent in the heart and testis. Mice deficient in Jnk3 are protected against kainic acid-induced seizures, strok
Probab=100.00 E-value=1e-46 Score=381.41 Aligned_cols=284 Identities=33% Similarity=0.570 Sum_probs=227.7
Q ss_pred cceeEeeeeccCCceEEEEEEEcCCCCEEEEEEeccc------hhhHHHHHHHHHHcCCCCccccceeeeeccC-CCceE
Q 011138 137 ISYMAERVVGTGSFGVVFQAKCLETGDSVAIKKVLQD------KRYKNRELQIMRLLNHPNVVSLKHCFFSTTE-KDELY 209 (492)
Q Consensus 137 ~~y~~~~~lG~G~fg~Vy~~~~~~~g~~vAiK~~~~~------~~~~~~E~~il~~l~h~nIv~l~~~~~~~~~-~~~~~ 209 (492)
.+|.+.+.||+|+||.||+|.+..+++.||||++... .....+|+.+++.++||||++++++|..... .....
T Consensus 17 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~ 96 (355)
T cd07874 17 KRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLLNVFTPQKSLEEFQD 96 (355)
T ss_pred hceeEEEEeeecCCEEEEEEEecCCCceEEEEEeCCcccChHHHHHHHHHHHHHHHhCCCchhceeeeeeccccccccce
Confidence 4799999999999999999999999999999988542 1234479999999999999999998854332 23345
Q ss_pred EEEEeeechhhHHHHhhhhhhcCCCcCHHHHHHHHHHHHHHHHHHHhhCCcccCCCCCCceEEcCCCCcEEEeeecCccc
Q 011138 210 LNLVLEYISETVYRVSKHYTRMNQHVPILYVQLYTYQICRALNYLHHVVGVCHRDIKPQNLLVNPHTHQLKICDFGSAKM 289 (492)
Q Consensus 210 ~~lV~E~~~~~l~~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~yLH~~~givHrDlKp~NILl~~~~~~vkL~DFG~a~~ 289 (492)
+|+||||+++++...+. ..++...+..++.||+.||.|||+ +||+||||||+|||++.++ .+||+|||+++.
T Consensus 97 ~~lv~e~~~~~l~~~~~------~~l~~~~~~~~~~qi~~aL~~LH~-~givHrDikp~Nill~~~~-~~kl~Dfg~~~~ 168 (355)
T cd07874 97 VYLVMELMDANLCQVIQ------MELDHERMSYLLYQMLCGIKHLHS-AGIIHRDLKPSNIVVKSDC-TLKILDFGLART 168 (355)
T ss_pred eEEEhhhhcccHHHHHh------hcCCHHHHHHHHHHHHHHHHHHHh-CCcccCCCChHHEEECCCC-CEEEeeCccccc
Confidence 78999999988766442 347788899999999999999997 9999999999999999887 799999999986
Q ss_pred cCCCCCCccceeccCccCchhhcCCCCCCcchhhHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCCHHHHhhcC-
Q 011138 290 LVPGEPNISYICSRYYRAPELIFGATEYTTAIDMWSIGCVLAELLLGQPLFPGESGVDQLVEIIKILGTPTREEIKCMN- 368 (492)
Q Consensus 290 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DvwSlGvil~ell~G~~pf~~~~~~~~~~~i~~~~g~p~~~~~~~~~- 368 (492)
...........||+.|+|||++.+. .++.++|||||||++|+|++|+.||.+.+..+.+..++..++.|..+.+....
T Consensus 169 ~~~~~~~~~~~~t~~y~aPE~~~~~-~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 247 (355)
T cd07874 169 AGTSFMMTPYVVTRYYRAPEVILGM-GYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTPCPEFMKKLQP 247 (355)
T ss_pred CCCccccCCccccCCccCHHHHcCC-CCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCCHHHHHhhcH
Confidence 6444444567899999999999665 48999999999999999999999999999889999999999988776554332
Q ss_pred ---------CCCcccCCCcccC---CCcccccCCCCChhHhhhhccccccCCCCcCCHHHhhCCCCCCCCCCC
Q 011138 369 ---------PNYTEFKFPQIKA---HPWHKIFHKRMPPEALDLVSRLLQYSPSLRCTALEACAHPFFDDLRDP 429 (492)
Q Consensus 369 ---------~~~~~~~~~~~~~---~~~~~~~~~~~s~~~~~Li~~~L~~dP~~R~t~~e~l~Hp~f~~~~~~ 429 (492)
+.+....++.... .+.........+.++++||.+||+.||++|||+.|+|+||||..+.++
T Consensus 248 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~mL~~dP~~Rps~~ell~hp~~~~~~~~ 320 (355)
T cd07874 248 TVRNYVENRPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVIDPAKRISVDEALQHPYINVWYDP 320 (355)
T ss_pred HHHHHHhcCCccccccchhhccccccccccccccccchHHHHHHHHHhcCCchhcCCHHHHhcCcchhcccCh
Confidence 2222222222110 011112233457789999999999999999999999999999876554
No 49
>cd05631 STKc_GRK4 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 4. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK4 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK4 has a limited tissue distribution. It is mainly found i
Probab=100.00 E-value=6.8e-47 Score=370.97 Aligned_cols=256 Identities=25% Similarity=0.388 Sum_probs=206.3
Q ss_pred eeEeeeeccCCceEEEEEEEcCCCCEEEEEEeccch-------hhHHHHHHHHHHcCCCCccccceeeeeccCCCceEEE
Q 011138 139 YMAERVVGTGSFGVVFQAKCLETGDSVAIKKVLQDK-------RYKNRELQIMRLLNHPNVVSLKHCFFSTTEKDELYLN 211 (492)
Q Consensus 139 y~~~~~lG~G~fg~Vy~~~~~~~g~~vAiK~~~~~~-------~~~~~E~~il~~l~h~nIv~l~~~~~~~~~~~~~~~~ 211 (492)
|.+.+.||+|+||.||+|.+..+|+.||+|.+.... ....+|+.+++.++|+||+++++++ .+..+++
T Consensus 2 f~~~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~iv~~~~~~-----~~~~~~~ 76 (285)
T cd05631 2 FRHYRVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGEAMALNEKRILEKVNSRFVVSLAYAY-----ETKDALC 76 (285)
T ss_pred ceEEEEEecCCCEEEEEEEEecCCceEEEEEeeHhhhhhhhhHHHHHHHHHHHHhcCCCcEEEEEEEE-----ccCCeEE
Confidence 788999999999999999999999999999875322 2345799999999999999999888 4445689
Q ss_pred EEeeechhhHHHHhhhhhhcCCCcCHHHHHHHHHHHHHHHHHHHhhCCcccCCCCCCceEEcCCCCcEEEeeecCccccC
Q 011138 212 LVLEYISETVYRVSKHYTRMNQHVPILYVQLYTYQICRALNYLHHVVGVCHRDIKPQNLLVNPHTHQLKICDFGSAKMLV 291 (492)
Q Consensus 212 lV~E~~~~~l~~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~yLH~~~givHrDlKp~NILl~~~~~~vkL~DFG~a~~~~ 291 (492)
+||||+.++.+..... ......+++..+..++.||+.||.|||+ +||+||||||+|||++.++ .+||+|||++....
T Consensus 77 lv~e~~~~g~L~~~~~-~~~~~~~~~~~~~~~~~qi~~~l~~lH~-~~iiH~dikp~Nill~~~~-~~kl~Dfg~~~~~~ 153 (285)
T cd05631 77 LVLTIMNGGDLKFHIY-NMGNPGFDEQRAIFYAAELCCGLEDLQR-ERIVYRDLKPENILLDDRG-HIRISDLGLAVQIP 153 (285)
T ss_pred EEEEecCCCcHHHHHH-hhCCCCCCHHHHHHHHHHHHHHHHHHHh-CCEEeCCCCHHHEEECCCC-CEEEeeCCCcEEcC
Confidence 9999998764432211 1123468899999999999999999997 9999999999999999877 79999999998765
Q ss_pred CCCCCccceeccCccCchhhcCCCCCCcchhhHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCCHHHHhhcCCCC
Q 011138 292 PGEPNISYICSRYYRAPELIFGATEYTTAIDMWSIGCVLAELLLGQPLFPGESGVDQLVEIIKILGTPTREEIKCMNPNY 371 (492)
Q Consensus 292 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DvwSlGvil~ell~G~~pf~~~~~~~~~~~i~~~~g~p~~~~~~~~~~~~ 371 (492)
.........||+.|+|||++.+. .++.++|||||||++|+|++|+.||.+.........+...+..+.
T Consensus 154 ~~~~~~~~~g~~~y~aPE~~~~~-~~~~~~DvwslGvil~el~~g~~pf~~~~~~~~~~~~~~~~~~~~----------- 221 (285)
T cd05631 154 EGETVRGRVGTVGYMAPEVINNE-KYTFSPDWWGLGCLIYEMIQGQSPFRKRKERVKREEVDRRVKEDQ----------- 221 (285)
T ss_pred CCCeecCCCCCCCccCHhhhcCC-CCCcccCchhHHHHHHHHHhCCCCCCCCCcchhHHHHHHHhhccc-----------
Confidence 44444556899999999999754 589999999999999999999999987665333333322111100
Q ss_pred cccCCCcccCCCcccccCCCCChhHhhhhccccccCCCCcCC-----HHHhhCCCCCCCCCC
Q 011138 372 TEFKFPQIKAHPWHKIFHKRMPPEALDLVSRLLQYSPSLRCT-----ALEACAHPFFDDLRD 428 (492)
Q Consensus 372 ~~~~~~~~~~~~~~~~~~~~~s~~~~~Li~~~L~~dP~~R~t-----~~e~l~Hp~f~~~~~ 428 (492)
..++..+++++.+||++||+.||.+|++ ++++++||||+++..
T Consensus 222 --------------~~~~~~~s~~~~~li~~~l~~~P~~R~~~~~~~~~~~~~h~~~~~~~~ 269 (285)
T cd05631 222 --------------EEYSEKFSEDAKSICRMLLTKNPKERLGCRGNGAAGVKQHPIFKNINF 269 (285)
T ss_pred --------------ccCCccCCHHHHHHHHHHhhcCHHHhcCCCCCCHHHHhcCHhhcCCCH
Confidence 0123457899999999999999999997 899999999998653
No 50
>PTZ00263 protein kinase A catalytic subunit; Provisional
Probab=100.00 E-value=5.5e-47 Score=379.35 Aligned_cols=249 Identities=29% Similarity=0.455 Sum_probs=207.1
Q ss_pred ccceeEeeeeccCCceEEEEEEEcCCCCEEEEEEeccch-------hhHHHHHHHHHHcCCCCccccceeeeeccCCCce
Q 011138 136 TISYMAERVVGTGSFGVVFQAKCLETGDSVAIKKVLQDK-------RYKNRELQIMRLLNHPNVVSLKHCFFSTTEKDEL 208 (492)
Q Consensus 136 ~~~y~~~~~lG~G~fg~Vy~~~~~~~g~~vAiK~~~~~~-------~~~~~E~~il~~l~h~nIv~l~~~~~~~~~~~~~ 208 (492)
..+|.+.+.||+|+||.||+|.+..+|+.||||++.... ....+|+.+++.++||||+++++++ .+..
T Consensus 17 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~-----~~~~ 91 (329)
T PTZ00263 17 LSDFEMGETLGTGSFGRVRIAKHKGTGEYYAIKCLKKREILKMKQVQHVAQEKSILMELSHPFIVNMMCSF-----QDEN 91 (329)
T ss_pred chheEEEEEEEecCCeEEEEEEECCCCCEEEEEEEEHHHHhhhhhHHHHHHHHHHHHhCCCCCCCcEEEEE-----EcCC
Confidence 457999999999999999999999999999999986432 2345799999999999999999988 4455
Q ss_pred EEEEEeeechhh-HHHHhhhhhhcCCCcCHHHHHHHHHHHHHHHHHHHhhCCcccCCCCCCceEEcCCCCcEEEeeecCc
Q 011138 209 YLNLVLEYISET-VYRVSKHYTRMNQHVPILYVQLYTYQICRALNYLHHVVGVCHRDIKPQNLLVNPHTHQLKICDFGSA 287 (492)
Q Consensus 209 ~~~lV~E~~~~~-l~~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~yLH~~~givHrDlKp~NILl~~~~~~vkL~DFG~a 287 (492)
++|+||||+.++ +...+. ....+++..++.++.||+.||.|||+ +||+||||||+|||++.++ .+||+|||++
T Consensus 92 ~~~lv~e~~~~~~L~~~l~----~~~~~~~~~~~~~~~qi~~aL~~LH~-~~ivH~dlkp~NIll~~~~-~~kl~Dfg~~ 165 (329)
T PTZ00263 92 RVYFLLEFVVGGELFTHLR----KAGRFPNDVAKFYHAELVLAFEYLHS-KDIIYRDLKPENLLLDNKG-HVKVTDFGFA 165 (329)
T ss_pred EEEEEEcCCCCChHHHHHH----HcCCCCHHHHHHHHHHHHHHHHHHHH-CCeeecCCCHHHEEECCCC-CEEEeeccCc
Confidence 689999999865 444332 24568889999999999999999997 9999999999999999888 7999999999
Q ss_pred cccCCCCCCccceeccCccCchhhcCCCCCCcchhhHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCCHHHHhhc
Q 011138 288 KMLVPGEPNISYICSRYYRAPELIFGATEYTTAIDMWSIGCVLAELLLGQPLFPGESGVDQLVEIIKILGTPTREEIKCM 367 (492)
Q Consensus 288 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DvwSlGvil~ell~G~~pf~~~~~~~~~~~i~~~~g~p~~~~~~~~ 367 (492)
+.... ......||+.|+|||++.+.. ++.++|||||||++|+|++|..||.+.+..+.+..+..
T Consensus 166 ~~~~~--~~~~~~gt~~y~aPE~~~~~~-~~~~~DiwslG~il~elltg~~pf~~~~~~~~~~~i~~------------- 229 (329)
T PTZ00263 166 KKVPD--RTFTLCGTPEYLAPEVIQSKG-HGKAVDWWTMGVLLYEFIAGYPPFFDDTPFRIYEKILA------------- 229 (329)
T ss_pred eEcCC--CcceecCChhhcCHHHHcCCC-CCCcceeechHHHHHHHHcCCCCCCCCCHHHHHHHHhc-------------
Confidence 86533 233568999999999996554 79999999999999999999999988776555544432
Q ss_pred CCCCcccCCCcccCCCcccccCCCCChhHhhhhccccccCCCCcCC-----HHHhhCCCCCCCCC
Q 011138 368 NPNYTEFKFPQIKAHPWHKIFHKRMPPEALDLVSRLLQYSPSLRCT-----ALEACAHPFFDDLR 427 (492)
Q Consensus 368 ~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~Li~~~L~~dP~~R~t-----~~e~l~Hp~f~~~~ 427 (492)
....+ +..++.++++||.+||+.||.+|++ +.++++||||.+..
T Consensus 230 ----~~~~~------------p~~~~~~~~~li~~~L~~dP~~R~~~~~~~~~~ll~hp~f~~~~ 278 (329)
T PTZ00263 230 ----GRLKF------------PNWFDGRARDLVKGLLQTDHTKRLGTLKGGVADVKNHPYFHGAN 278 (329)
T ss_pred ----CCcCC------------CCCCCHHHHHHHHHHhhcCHHHcCCCCCCCHHHHhcCCccCCCC
Confidence 11111 2346889999999999999999997 79999999998754
No 51
>cd07868 STKc_CDK8 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 8. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 8 (CDK8) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK8 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK8 can act as a negative or positive regulator of transcription, depending on the scenario. Together with its regulator, cyclin C, it reversibly associates with the multi-subunit core Mediator complex, a cofactor that is involved in regulating RNA p
Probab=100.00 E-value=1.3e-46 Score=374.40 Aligned_cols=278 Identities=31% Similarity=0.525 Sum_probs=211.1
Q ss_pred eeeeccCCceEEEEEEEc--CCCCEEEEEEeccch--hhHHHHHHHHHHcCCCCccccceeeeeccCCCceEEEEEeeec
Q 011138 142 ERVVGTGSFGVVFQAKCL--ETGDSVAIKKVLQDK--RYKNRELQIMRLLNHPNVVSLKHCFFSTTEKDELYLNLVLEYI 217 (492)
Q Consensus 142 ~~~lG~G~fg~Vy~~~~~--~~g~~vAiK~~~~~~--~~~~~E~~il~~l~h~nIv~l~~~~~~~~~~~~~~~~lV~E~~ 217 (492)
++.||+|+||+||+|+++ .+++.||+|.+.... ....+|+.+++.++||||++++++|... ....+|+||||+
T Consensus 6 ~~~lG~G~~g~Vy~~~~~~~~~~~~~aiK~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~---~~~~~~lv~e~~ 82 (317)
T cd07868 6 GCKVGRGTYGHVYKAKRKDGKDDRDYALKQIEGTGISMSACREIALLRELKHPNVISLQKVFLSH---ADRKVWLLFDYA 82 (317)
T ss_pred ccccccCCCeEEEEEEEccCCCCceEEEEEECCCCCcHHHHHHHHHHHhcCCCCCcceeeeEecC---CCcEEEEEEecc
Confidence 457999999999999965 467899999886532 3456899999999999999999988543 234688999999
Q ss_pred hhhHHHHhhhhhh-----cCCCcCHHHHHHHHHHHHHHHHHHHhhCCcccCCCCCCceEEcC---CCCcEEEeeecCccc
Q 011138 218 SETVYRVSKHYTR-----MNQHVPILYVQLYTYQICRALNYLHHVVGVCHRDIKPQNLLVNP---HTHQLKICDFGSAKM 289 (492)
Q Consensus 218 ~~~l~~~~~~~~~-----~~~~~~~~~~~~i~~qi~~aL~yLH~~~givHrDlKp~NILl~~---~~~~vkL~DFG~a~~ 289 (492)
++++...+..... ....+++..++.++.||+.||.|||+ +||+||||||+|||++. ..+.+||+|||+++.
T Consensus 83 ~~~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~al~~LH~-~~ivHrDlkp~Nil~~~~~~~~~~~kl~DfG~a~~ 161 (317)
T cd07868 83 EHDLWHIIKFHRASKANKKPVQLPRGMVKSLLYQILDGIHYLHA-NWVLHRDLKPANILVMGEGPERGRVKIADMGFARL 161 (317)
T ss_pred CCCHHHHHHhcccccccCCcccCCHHHHHHHHHHHHHHHHHHHh-CCEEcCCCCHHHEEEecCCCCcCcEEEeecCceec
Confidence 9887776543211 12358899999999999999999997 99999999999999942 223799999999976
Q ss_pred cCCCC----CCccceeccCccCchhhcCCCCCCcchhhHHHHHHHHHHHhCCCCCCCCCh---------HHHHHHHHHHh
Q 011138 290 LVPGE----PNISYICSRYYRAPELIFGATEYTTAIDMWSIGCVLAELLLGQPLFPGESG---------VDQLVEIIKIL 356 (492)
Q Consensus 290 ~~~~~----~~~~~~gt~~y~aPE~~~~~~~~~~~~DvwSlGvil~ell~G~~pf~~~~~---------~~~~~~i~~~~ 356 (492)
..... ......||+.|+|||++.+...++.++||||+||++|+|++|++||.+... .+++..+...+
T Consensus 162 ~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~~f~~~~~~~~~~~~~~~~~~~~~~~~~ 241 (317)
T cd07868 162 FNSPLKPLADLDPVVVTFWYRAPELLLGARHYTKAIDIWAIGCIFAELLTSEPIFHCRQEDIKTSNPYHHDQLDRIFNVM 241 (317)
T ss_pred cCCCCccccccCCccccccccCCHHHcCCCCcCchhhHHHHHHHHHHHHhCCCCccCCcccccccccccHHHHHHHHHhc
Confidence 53321 223467899999999998766789999999999999999999999975432 46677888889
Q ss_pred CCCCHHHHhhcCCCC---------cccCCCcccCCCcccccCCCCChhHhhhhccccccCCCCcCCHHHhhCCCCC
Q 011138 357 GTPTREEIKCMNPNY---------TEFKFPQIKAHPWHKIFHKRMPPEALDLVSRLLQYSPSLRCTALEACAHPFF 423 (492)
Q Consensus 357 g~p~~~~~~~~~~~~---------~~~~~~~~~~~~~~~~~~~~~s~~~~~Li~~~L~~dP~~R~t~~e~l~Hp~f 423 (492)
|.|....+....... ....+.......+........+.++.+||++||++||.+|||++|+|+||||
T Consensus 242 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dli~~mL~~dP~~R~t~~e~l~hp~f 317 (317)
T cd07868 242 GFPADKDWEDIKKMPEHSTLMKDFRRNTYTNCSLIKYMEKHKVKPDSKAFHLLQKLLTMDPIKRITSEQAMQDPYF 317 (317)
T ss_pred CCCChHHhHHHhhccchhhhhhhhhccccCcccccchHHhcCCCCChHHHHHHHHHhccCcccCCCHHHHhcCCCC
Confidence 988877665432110 0000000000001011112346779999999999999999999999999998
No 52
>PHA03212 serine/threonine kinase US3; Provisional
Probab=100.00 E-value=5.9e-47 Score=387.12 Aligned_cols=277 Identities=25% Similarity=0.353 Sum_probs=214.3
Q ss_pred ccceeEeeeeccCCceEEEEEEEcCCCCEEEEEEeccchhhHHHHHHHHHHcCCCCccccceeeeeccCCCceEEEEEee
Q 011138 136 TISYMAERVVGTGSFGVVFQAKCLETGDSVAIKKVLQDKRYKNRELQIMRLLNHPNVVSLKHCFFSTTEKDELYLNLVLE 215 (492)
Q Consensus 136 ~~~y~~~~~lG~G~fg~Vy~~~~~~~g~~vAiK~~~~~~~~~~~E~~il~~l~h~nIv~l~~~~~~~~~~~~~~~~lV~E 215 (492)
..+|.+.+.||+|+||.||+|.+..+++.||||.... ....+|+.+++.|+|||||+++++|. ...+.++|||
T Consensus 91 ~~~y~~~~~lg~G~~g~V~~~~d~~~~~~vaiK~~~~--~~~~~E~~il~~l~HpnIv~~~~~~~-----~~~~~~lv~e 163 (391)
T PHA03212 91 KAGFSILETFTPGAEGFAFACIDNKTCEHVVIKAGQR--GGTATEAHILRAINHPSIIQLKGTFT-----YNKFTCLILP 163 (391)
T ss_pred cCCcEEEEEEcCCCCeEEEEEEECCCCCEEEEechhh--hhhHHHHHHHHhCCCCCCCCEeEEEE-----ECCeeEEEEe
Confidence 3469999999999999999999999999999997543 34568999999999999999999883 3446889999
Q ss_pred echhhHHHHhhhhhhcCCCcCHHHHHHHHHHHHHHHHHHHhhCCcccCCCCCCceEEcCCCCcEEEeeecCccccCCC--
Q 011138 216 YISETVYRVSKHYTRMNQHVPILYVQLYTYQICRALNYLHHVVGVCHRDIKPQNLLVNPHTHQLKICDFGSAKMLVPG-- 293 (492)
Q Consensus 216 ~~~~~l~~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~yLH~~~givHrDlKp~NILl~~~~~~vkL~DFG~a~~~~~~-- 293 (492)
++.++++..+.. ...+++..++.++.||+.||.|||+ +||+||||||+|||++.++ .+||+|||+|+.....
T Consensus 164 ~~~~~L~~~l~~----~~~l~~~~~~~i~~qi~~aL~ylH~-~~IvHrDiKP~NIll~~~~-~vkL~DFG~a~~~~~~~~ 237 (391)
T PHA03212 164 RYKTDLYCYLAA----KRNIAICDILAIERSVLRAIQYLHE-NRIIHRDIKAENIFINHPG-DVCLGDFGAACFPVDINA 237 (391)
T ss_pred cCCCCHHHHHHh----cCCCCHHHHHHHHHHHHHHHHHHHh-CCcccCCCChHhEEEcCCC-CEEEEeCCcccccccccc
Confidence 999877765432 3468889999999999999999997 9999999999999999887 7999999999753221
Q ss_pred CCCccceeccCccCchhhcCCCCCCcchhhHHHHHHHHHHHhCCCCCCCC-------ChHHHHHHHHHHhCCCCHHHHhh
Q 011138 294 EPNISYICSRYYRAPELIFGATEYTTAIDMWSIGCVLAELLLGQPLFPGE-------SGVDQLVEIIKILGTPTREEIKC 366 (492)
Q Consensus 294 ~~~~~~~gt~~y~aPE~~~~~~~~~~~~DvwSlGvil~ell~G~~pf~~~-------~~~~~~~~i~~~~g~p~~~~~~~ 366 (492)
.......||+.|+|||++.+. .++.++|||||||++|||++|..||... ....++..++..+|.++.+....
T Consensus 238 ~~~~~~~gt~~y~aPE~~~~~-~~~~~~DiwSlGvil~elltg~~p~~~~~~~~~~~~~~~~l~~i~~~~g~~p~~~~~~ 316 (391)
T PHA03212 238 NKYYGWAGTIATNAPELLARD-PYGPAVDIWSAGIVLFEMATCHDSLFEKDGLDGDCDSDRQIKLIIRRSGTHPNEFPID 316 (391)
T ss_pred cccccccCccCCCChhhhcCC-CCCcHHHHHHHHHHHHHHHHCCCCcCCcccccccCchhHHHHHHHHHhcCChhhcCcc
Confidence 223356899999999999654 5899999999999999999999887543 23456777888777765332100
Q ss_pred cCCCCc---------ccCCCcccCCCcccccCCCCChhHhhhhccccccCCCCcCCHHHhhCCCCCCCCCCC
Q 011138 367 MNPNYT---------EFKFPQIKAHPWHKIFHKRMPPEALDLVSRLLQYSPSLRCTALEACAHPFFDDLRDP 429 (492)
Q Consensus 367 ~~~~~~---------~~~~~~~~~~~~~~~~~~~~s~~~~~Li~~~L~~dP~~R~t~~e~l~Hp~f~~~~~~ 429 (492)
...... ....+. ....|... ..++.++.+||.+||++||.+|||+.|+|+||||+.+..+
T Consensus 317 ~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~--~~~~~~l~~Li~~mL~~dP~~Rpta~elL~hp~f~~~~~~ 385 (391)
T PHA03212 317 AQANLDEIYIGLAKKSSRKPG-SRPLWTNL--YELPIDLEYLICKMLAFDAHHRPSAEALLDFAAFQDIPDP 385 (391)
T ss_pred hhHHHHHHHHHHHhccCCCCC-CCCCHHHH--hhhhhhHHHHHHHHhcCChhhCCCHHHHhcChhhccCCCC
Confidence 000000 000000 00111111 1357789999999999999999999999999999987543
No 53
>cd05571 STKc_PKB Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B. Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. It is activated downstream of PI3K and plays important roles in diverse cellular functions including cell survival, growth, proliferation, angiogenesis, motility, and migration. PKB also has a central role in a variety of human cancers, having be
Probab=100.00 E-value=5.7e-47 Score=378.30 Aligned_cols=245 Identities=28% Similarity=0.445 Sum_probs=201.2
Q ss_pred eeeccCCceEEEEEEEcCCCCEEEEEEeccch-------hhHHHHHHHHHHcCCCCccccceeeeeccCCCceEEEEEee
Q 011138 143 RVVGTGSFGVVFQAKCLETGDSVAIKKVLQDK-------RYKNRELQIMRLLNHPNVVSLKHCFFSTTEKDELYLNLVLE 215 (492)
Q Consensus 143 ~~lG~G~fg~Vy~~~~~~~g~~vAiK~~~~~~-------~~~~~E~~il~~l~h~nIv~l~~~~~~~~~~~~~~~~lV~E 215 (492)
++||+|+||.||+|.+..+|+.||||++.... ....+|+.+++.++||||++++++| ....++|+|||
T Consensus 1 ~~lG~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~l~hp~i~~~~~~~-----~~~~~~~lv~e 75 (323)
T cd05571 1 KLLGKGTFGKVILVREKATGKYYAMKILKKEVIIAKDEVAHTLTESRVLQNTRHPFLTALKYSF-----QTHDRLCFVME 75 (323)
T ss_pred CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhHHHHHHHHHHHHHHhCCCCCCCCEEEEE-----EcCCEEEEEEe
Confidence 36999999999999999999999999986432 2234699999999999999999988 44557899999
Q ss_pred echhhHH-HHhhhhhhcCCCcCHHHHHHHHHHHHHHHHHHHhhCCcccCCCCCCceEEcCCCCcEEEeeecCccccCC-C
Q 011138 216 YISETVY-RVSKHYTRMNQHVPILYVQLYTYQICRALNYLHHVVGVCHRDIKPQNLLVNPHTHQLKICDFGSAKMLVP-G 293 (492)
Q Consensus 216 ~~~~~l~-~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~yLH~~~givHrDlKp~NILl~~~~~~vkL~DFG~a~~~~~-~ 293 (492)
|+.++.+ ..+. ....+++..++.++.||+.||+|||+ +||+||||||+|||++.++ .+||+|||+++.... .
T Consensus 76 ~~~~~~L~~~l~----~~~~~~~~~~~~~~~qi~~~L~~lH~-~~ivHrDlkp~NIll~~~~-~~kl~DfG~a~~~~~~~ 149 (323)
T cd05571 76 YANGGELFFHLS----RERVFSEDRARFYGAEIVSALGYLHS-CDVVYRDLKLENLMLDKDG-HIKITDFGLCKEGISDG 149 (323)
T ss_pred CCCCCcHHHHHH----HcCCCCHHHHHHHHHHHHHHHHHHHh-CCeEeCCCCHHHEEECCCC-CEEEeeCCCCcccccCC
Confidence 9987543 3222 24568899999999999999999997 9999999999999999887 799999999875422 2
Q ss_pred CCCccceeccCccCchhhcCCCCCCcchhhHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCCHHHHhhcCCCCcc
Q 011138 294 EPNISYICSRYYRAPELIFGATEYTTAIDMWSIGCVLAELLLGQPLFPGESGVDQLVEIIKILGTPTREEIKCMNPNYTE 373 (492)
Q Consensus 294 ~~~~~~~gt~~y~aPE~~~~~~~~~~~~DvwSlGvil~ell~G~~pf~~~~~~~~~~~i~~~~g~p~~~~~~~~~~~~~~ 373 (492)
......+||+.|+|||++.+. .++.++|||||||++|||++|..||.+.+.......+.. ..
T Consensus 150 ~~~~~~~gt~~y~aPE~~~~~-~~~~~~DiwSlG~il~elltg~~Pf~~~~~~~~~~~~~~-----------------~~ 211 (323)
T cd05571 150 ATMKTFCGTPEYLAPEVLEDN-DYGRAVDWWGLGVVMYEMMCGRLPFYNQDHEKLFELILM-----------------EE 211 (323)
T ss_pred CcccceecCccccChhhhcCC-CCCccccCcccchhhhhhhcCCCCCCCCCHHHHHHHHHc-----------------CC
Confidence 233456899999999999654 489999999999999999999999988766554444322 11
Q ss_pred cCCCcccCCCcccccCCCCChhHhhhhccccccCCCCcC-----CHHHhhCCCCCCCCCC
Q 011138 374 FKFPQIKAHPWHKIFHKRMPPEALDLVSRLLQYSPSLRC-----TALEACAHPFFDDLRD 428 (492)
Q Consensus 374 ~~~~~~~~~~~~~~~~~~~s~~~~~Li~~~L~~dP~~R~-----t~~e~l~Hp~f~~~~~ 428 (492)
.. ++..+++++.+||.+||+.||++|| ++.++++||||+.+..
T Consensus 212 ~~------------~p~~~~~~~~~li~~~L~~dP~~R~~~~~~~~~~ll~h~~f~~~~~ 259 (323)
T cd05571 212 IR------------FPRTLSPEAKSLLAGLLKKDPKQRLGGGPEDAKEIMEHRFFASINW 259 (323)
T ss_pred CC------------CCCCCCHHHHHHHHHHccCCHHHcCCCCCCCHHHHHcCCCcCCCCH
Confidence 11 2245789999999999999999999 8999999999987643
No 54
>cd07873 STKc_PCTAIRE1 Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-1 kinase. Serine/Threonine Kinases (STKs), PCTAIRE-1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-1 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-1 is expressed ubiquitously and is localized in the cytoplasm. Its kinase activity is cell cycle dependent and peaks at the S and G2 phases. PCTAIRE-1 is highly expressed in the brain and may pl
Probab=100.00 E-value=4.2e-46 Score=368.14 Aligned_cols=282 Identities=33% Similarity=0.617 Sum_probs=229.0
Q ss_pred cceeEeeeeccCCceEEEEEEEcCCCCEEEEEEeccch-----hhHHHHHHHHHHcCCCCccccceeeeeccCCCceEEE
Q 011138 137 ISYMAERVVGTGSFGVVFQAKCLETGDSVAIKKVLQDK-----RYKNRELQIMRLLNHPNVVSLKHCFFSTTEKDELYLN 211 (492)
Q Consensus 137 ~~y~~~~~lG~G~fg~Vy~~~~~~~g~~vAiK~~~~~~-----~~~~~E~~il~~l~h~nIv~l~~~~~~~~~~~~~~~~ 211 (492)
.+|.+.+.||.|+||.||+|.+..+++.||+|.+.... ....+|+.+++.++||||+++++++ ....+++
T Consensus 6 ~~y~~~~~lg~g~~g~vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~nI~~~~~~~-----~~~~~~~ 80 (301)
T cd07873 6 ETYIKLDKLGEGTYATVYKGRSKLTDNLVALKEIRLEHEEGAPCTAIREVSLLKDLKHANIVTLHDII-----HTEKSLT 80 (301)
T ss_pred cceEEeeEeccCcCEEEEEEEEcCCCcEEEEEEEecccccCchhHHHHHHHHHHhcCCCCcceEEEEE-----ecCCeEE
Confidence 46999999999999999999999999999999885321 2345799999999999999999998 4445689
Q ss_pred EEeeechhhHHHHhhhhhhcCCCcCHHHHHHHHHHHHHHHHHHHhhCCcccCCCCCCceEEcCCCCcEEEeeecCccccC
Q 011138 212 LVLEYISETVYRVSKHYTRMNQHVPILYVQLYTYQICRALNYLHHVVGVCHRDIKPQNLLVNPHTHQLKICDFGSAKMLV 291 (492)
Q Consensus 212 lV~E~~~~~l~~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~yLH~~~givHrDlKp~NILl~~~~~~vkL~DFG~a~~~~ 291 (492)
+||||+.+++...+.. ....+++..++.++.||+.||.|||+ .||+||||||+|||++.++ .+||+|||++....
T Consensus 81 lv~e~~~~~l~~~l~~---~~~~~~~~~~~~~~~qi~~aL~~lH~-~~i~H~dlkp~Nil~~~~~-~~kl~dfg~~~~~~ 155 (301)
T cd07873 81 LVFEYLDKDLKQYLDD---CGNSINMHNVKLFLFQLLRGLNYCHR-RKVLHRDLKPQNLLINERG-ELKLADFGLARAKS 155 (301)
T ss_pred EEEeccccCHHHHHHh---cCCCCCHHHHHHHHHHHHHHHHHHHh-CCeeCCCCCHHHEEECCCC-cEEECcCcchhccC
Confidence 9999999877665432 23467889999999999999999997 9999999999999999887 79999999987543
Q ss_pred CCC-CCccceeccCccCchhhcCCCCCCcchhhHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCCHHHHhhcCC-
Q 011138 292 PGE-PNISYICSRYYRAPELIFGATEYTTAIDMWSIGCVLAELLLGQPLFPGESGVDQLVEIIKILGTPTREEIKCMNP- 369 (492)
Q Consensus 292 ~~~-~~~~~~gt~~y~aPE~~~~~~~~~~~~DvwSlGvil~ell~G~~pf~~~~~~~~~~~i~~~~g~p~~~~~~~~~~- 369 (492)
... ......+++.|+|||++.+...++.++|||||||++|+|++|++||.+.+..+++..+...++.|....+..+..
T Consensus 156 ~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~~Dv~slG~~l~el~tg~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 235 (301)
T cd07873 156 IPTKTYSNEVVTLWYRPPDILLGSTDYSTQIDMWGVGCIFYEMSTGRPLFPGSTVEEQLHFIFRILGTPTEETWPGILSN 235 (301)
T ss_pred CCCCcccccceeecccCcHHHhCCCCCccHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHcCCCChhhchhhhcc
Confidence 222 223456789999999987766688999999999999999999999999998888888999998888776654321
Q ss_pred -CCcccCCCcccCCCcccccCCCCChhHhhhhccccccCCCCcCCHHHhhCCCCCCCCCCC
Q 011138 370 -NYTEFKFPQIKAHPWHKIFHKRMPPEALDLVSRLLQYSPSLRCTALEACAHPFFDDLRDP 429 (492)
Q Consensus 370 -~~~~~~~~~~~~~~~~~~~~~~~s~~~~~Li~~~L~~dP~~R~t~~e~l~Hp~f~~~~~~ 429 (492)
.+....++....... ......+++++++||.+||+.||.+|||+.|+++||||+.+...
T Consensus 236 ~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~li~~ml~~dp~~R~t~~eil~h~~f~~~~~~ 295 (301)
T cd07873 236 EEFKSYNYPKYRADCL-HNHAPRLDSDGAELLSKLLQFEGRKRISAEEAMKHPYFHCLGER 295 (301)
T ss_pred ccccccccCccccccH-HhhcCCCCHHHHHHHHHHhcCCcccCcCHHHHhcCcccccccch
Confidence 122223333221111 12234678999999999999999999999999999999987643
No 55
>KOG0666 consensus Cyclin C-dependent kinase CDK8 [Transcription]
Probab=100.00 E-value=6.9e-48 Score=356.75 Aligned_cols=284 Identities=37% Similarity=0.630 Sum_probs=228.7
Q ss_pred cceeEeeeeccCCceEEEEEEEcCCCC----EEEEEEeccch------hhHHHHHHHHHHcCCCCccccceeeeeccCCC
Q 011138 137 ISYMAERVVGTGSFGVVFQAKCLETGD----SVAIKKVLQDK------RYKNRELQIMRLLNHPNVVSLKHCFFSTTEKD 206 (492)
Q Consensus 137 ~~y~~~~~lG~G~fg~Vy~~~~~~~g~----~vAiK~~~~~~------~~~~~E~~il~~l~h~nIv~l~~~~~~~~~~~ 206 (492)
..|++...||+|.||.||+|..+.++. .+|||++...+ ...-||+.+++.|+||||+.|..+|...
T Consensus 24 ~~ye~ig~Ig~GTYG~VykA~~~~~n~kr~k~yAiKkfk~~kd~tGiS~SAcREiaL~REl~h~nvi~Lv~Vfl~~---- 99 (438)
T KOG0666|consen 24 FEYEGIGKIGRGTYGKVYKAVRKNTNDKRTKEYAIKKFKGEKDGTGISMSACREIALLRELKHPNVISLVKVFLSH---- 99 (438)
T ss_pred HHhhccceecccccceeeEeeeccCCcccchhhHHHHHhccCCCCCcCHHHHHHHHHHHHhcCCcchhHHHHHhcc----
Confidence 359999999999999999997665543 68999886542 2334899999999999999999998653
Q ss_pred ceEEEEEeeechhhHHHHhhhhhhc-CCCcCHHHHHHHHHHHHHHHHHHHhhCCcccCCCCCCceEEcCC----CCcEEE
Q 011138 207 ELYLNLVLEYISETVYRVSKHYTRM-NQHVPILYVQLYTYQICRALNYLHHVVGVCHRDIKPQNLLVNPH----THQLKI 281 (492)
Q Consensus 207 ~~~~~lV~E~~~~~l~~~~~~~~~~-~~~~~~~~~~~i~~qi~~aL~yLH~~~givHrDlKp~NILl~~~----~~~vkL 281 (492)
+..+++++||.+.+|+.++.+.+.. ...++...++.|+.||+.|+.|||+ +=|+||||||.||||..+ | .|||
T Consensus 100 d~~v~l~fdYAEhDL~~II~fHr~~~~~~lp~~mvKsilwQil~Gv~YLH~-NWvlHRDLKPaNIlvmgdgperG-~VKI 177 (438)
T KOG0666|consen 100 DKKVWLLFDYAEHDLWHIIKFHRASKAKQLPRSMVKSILWQILDGVHYLHS-NWVLHRDLKPANILVMGDGPERG-RVKI 177 (438)
T ss_pred CceEEEEehhhhhhHHHHHHHhccchhccCCHHHHHHHHHHHHhhhHHHhh-hheeeccCCcceEEEeccCCccC-eeEe
Confidence 3468999999999999988765443 3568899999999999999999997 889999999999999766 5 8999
Q ss_pred eeecCccccCCCC----CCccceeccCccCchhhcCCCCCCcchhhHHHHHHHHHHHhCCCCCCCCC---------hHHH
Q 011138 282 CDFGSAKMLVPGE----PNISYICSRYYRAPELIFGATEYTTAIDMWSIGCVLAELLLGQPLFPGES---------GVDQ 348 (492)
Q Consensus 282 ~DFG~a~~~~~~~----~~~~~~gt~~y~aPE~~~~~~~~~~~~DvwSlGvil~ell~G~~pf~~~~---------~~~~ 348 (492)
+|||+++.+.+.- .....+.|.+|+|||+++|...|+.++||||+|||+.|||+-.+.|.+.. ..++
T Consensus 178 aDlGlaR~~~~plkpl~s~d~VVVTiWYRAPELLLGa~hYT~AiDvWAiGCIfaElLtl~PlF~g~E~k~~~~~Pfq~dQ 257 (438)
T KOG0666|consen 178 ADLGLARLFNNPLKPLASLDPVVVTIWYRAPELLLGARHYTKAIDVWAIGCIFAELLTLEPLFKGREEKIKTKNPFQHDQ 257 (438)
T ss_pred ecccHHHHhhccccccccCCceEEEEEecChHHhcccccccchhhhHHHHHHHHHHHccCccccchhhhcccCCCchHHH
Confidence 9999999874332 22346789999999999999999999999999999999999999997642 4578
Q ss_pred HHHHHHHhCCCCHHHHhhcC--CCCcc--cCCCc--ccCCCcccccC--CCCChhHhhhhccccccCCCCcCCHHHhhCC
Q 011138 349 LVEIIKILGTPTREEIKCMN--PNYTE--FKFPQ--IKAHPWHKIFH--KRMPPEALDLVSRLLQYSPSLRCTALEACAH 420 (492)
Q Consensus 349 ~~~i~~~~g~p~~~~~~~~~--~~~~~--~~~~~--~~~~~~~~~~~--~~~s~~~~~Li~~~L~~dP~~R~t~~e~l~H 420 (492)
+..|++++|.|+...|+.+. |.+.. -.|+. .....+...++ +.-++.+.+|+.+||++||-+|+|++++|+|
T Consensus 258 l~rIf~vLG~Pt~~~Wp~lkk~Pe~q~~ls~f~~~~~~n~sL~~~~~~~k~k~~~a~~LL~klL~yDP~kRIta~qAleh 337 (438)
T KOG0666|consen 258 LDRIFEVLGTPTDKDWPDLKKMPEYQTLLSDFRRHYYDNVSLHKYYHKHKVKDPSALDLLQKLLTYDPIKRITAEQALEH 337 (438)
T ss_pred HHHHHHHcCCCccccchhhhhCcchHHHHHHhHHhhcCcchHHHHHHHhcCCCchHHHHHHHHhccCchhhccHHHHhcc
Confidence 99999999999999887653 33311 01111 11111222222 2345669999999999999999999999999
Q ss_pred CCCCCC
Q 011138 421 PFFDDL 426 (492)
Q Consensus 421 p~f~~~ 426 (492)
+||+.-
T Consensus 338 ~yF~~d 343 (438)
T KOG0666|consen 338 PYFTED 343 (438)
T ss_pred cccccC
Confidence 999964
No 56
>cd07878 STKc_p38beta_MAPK11 Catalytic domain of the Serine/Threonine Kinase, p38beta Mitogen-Activated Protein Kinase. Serine/Threonine Kinases (STKs), p38beta subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38beta subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38beta, also called MAPK11, is
Probab=100.00 E-value=1.8e-46 Score=377.80 Aligned_cols=284 Identities=34% Similarity=0.613 Sum_probs=227.2
Q ss_pred cceeEeeeeccCCceEEEEEEEcCCCCEEEEEEeccch------hhHHHHHHHHHHcCCCCccccceeeeeccC-CCceE
Q 011138 137 ISYMAERVVGTGSFGVVFQAKCLETGDSVAIKKVLQDK------RYKNRELQIMRLLNHPNVVSLKHCFFSTTE-KDELY 209 (492)
Q Consensus 137 ~~y~~~~~lG~G~fg~Vy~~~~~~~g~~vAiK~~~~~~------~~~~~E~~il~~l~h~nIv~l~~~~~~~~~-~~~~~ 209 (492)
.+|.+.+.||+|+||+||+|.+..+++.||||++.... ....+|+.+++.++||||++++++|..... .....
T Consensus 15 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~ 94 (343)
T cd07878 15 ERYQNLTPVGSGAYGSVCSAYDTRLRQKVAVKKLSRPFQSLIHARRTYRELRLLKHMKHENVIGLLDVFTPATSIENFNE 94 (343)
T ss_pred hhhhhheecccCCCeEEEEEEECCCCCEEEEEEeCchhhhhHHHHHHHHHHHHHHhcCCCchhhhhhhhcccccccccCc
Confidence 46999999999999999999999999999999885432 234479999999999999999998743321 22345
Q ss_pred EEEEeeechhhHHHHhhhhhhcCCCcCHHHHHHHHHHHHHHHHHHHhhCCcccCCCCCCceEEcCCCCcEEEeeecCccc
Q 011138 210 LNLVLEYISETVYRVSKHYTRMNQHVPILYVQLYTYQICRALNYLHHVVGVCHRDIKPQNLLVNPHTHQLKICDFGSAKM 289 (492)
Q Consensus 210 ~~lV~E~~~~~l~~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~yLH~~~givHrDlKp~NILl~~~~~~vkL~DFG~a~~ 289 (492)
+|++||++++++..... ...+++..++.++.||+.||.|||+ +||+||||||+|||++.++ .+||+|||+++.
T Consensus 95 ~~~~~~~~~~~l~~~~~-----~~~l~~~~~~~i~~qi~~aL~~LH~-~~ivHrdikp~Nil~~~~~-~~kl~Dfg~~~~ 167 (343)
T cd07878 95 VYLVTNLMGADLNNIVK-----CQKLSDEHVQFLIYQLLRGLKYIHS-AGIIHRDLKPSNVAVNEDC-ELRILDFGLARQ 167 (343)
T ss_pred EEEEeecCCCCHHHHHh-----cCCCCHHHHHHHHHHHHHHHHHHHH-CCeecccCChhhEEECCCC-CEEEcCCcccee
Confidence 78999999877765443 3468999999999999999999997 9999999999999999887 799999999986
Q ss_pred cCCCCCCccceeccCccCchhhcCCCCCCcchhhHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCCHHHHhhcCC
Q 011138 290 LVPGEPNISYICSRYYRAPELIFGATEYTTAIDMWSIGCVLAELLLGQPLFPGESGVDQLVEIIKILGTPTREEIKCMNP 369 (492)
Q Consensus 290 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DvwSlGvil~ell~G~~pf~~~~~~~~~~~i~~~~g~p~~~~~~~~~~ 369 (492)
... ......||+.|+|||++.+...++.++|||||||++|+|++|+.||.+.+..+.+..+....+.+..+.+.....
T Consensus 168 ~~~--~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 245 (343)
T cd07878 168 ADD--EMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLKGKALFPGNDYIDQLKRIMEVVGTPSPEVLKKISS 245 (343)
T ss_pred cCC--CcCCccccccccCchHhcCCccCCchhhhHhHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHhCCCCHHHHHhcch
Confidence 532 334568999999999997766789999999999999999999999999988888888988888887765543322
Q ss_pred CCcc---cCCCcccCCCcccccCCCCChhHhhhhccccccCCCCcCCHHHhhCCCCCCCCCCCC
Q 011138 370 NYTE---FKFPQIKAHPWHKIFHKRMPPEALDLVSRLLQYSPSLRCTALEACAHPFFDDLRDPN 430 (492)
Q Consensus 370 ~~~~---~~~~~~~~~~~~~~~~~~~s~~~~~Li~~~L~~dP~~R~t~~e~l~Hp~f~~~~~~~ 430 (492)
.... ..++......+... ....++.+.+||.+||..||.+|||+.|+++||||....++.
T Consensus 246 ~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~li~~mL~~dp~~R~s~~ell~hp~~~~~~~~~ 308 (343)
T cd07878 246 EHARKYIQSLPHMPQQDLKKI-FRGANPLAIDLLEKMLVLDSDKRISASEALAHPYFSQYHDPE 308 (343)
T ss_pred hhHHHHhhccccccchhHHHh-ccCCCHHHHHHHHHHcCCChhhCCCHHHHhcCcchhccCCCc
Confidence 1110 01111111111111 234678899999999999999999999999999999877654
No 57
>cd07849 STKc_ERK1_2_like Catalytic domain of Extracellular signal-Regulated Kinase 1 and 2-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Extracellular signal-regulated kinases 1 and 2 (ERK1/2) and Fus3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. This ERK1/2-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the mitogen-activated protein kinases (MAPKs) ERK1, ERK2, baker's yeast Fus3, and similar proteins. MAPK pathways are important mediators of cellular responses to extracellular signals. ERK1/2 activation is preferentially by mitogenic factors, differentiation stimuli, and cytokines, through a kinase cascade involving the MAPK kinases MEK1/2 and a MAPK kinase
Probab=100.00 E-value=4.2e-46 Score=374.06 Aligned_cols=320 Identities=35% Similarity=0.635 Sum_probs=247.7
Q ss_pred cceeEeeeeccCCceEEEEEEEcCCCCEEEEEEeccc-----hhhHHHHHHHHHHcCCCCccccceeeeeccCCCceEEE
Q 011138 137 ISYMAERVVGTGSFGVVFQAKCLETGDSVAIKKVLQD-----KRYKNRELQIMRLLNHPNVVSLKHCFFSTTEKDELYLN 211 (492)
Q Consensus 137 ~~y~~~~~lG~G~fg~Vy~~~~~~~g~~vAiK~~~~~-----~~~~~~E~~il~~l~h~nIv~l~~~~~~~~~~~~~~~~ 211 (492)
.+|.+.+.||+|+||.||+|.+..+|+.||||.+... .....+|+.+++.++|+||+++++++..........+|
T Consensus 5 ~~y~i~~~lg~G~~g~vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~ 84 (336)
T cd07849 5 PRYQNLSYIGEGAYGMVCSATHKPTGVKVAIKKISPFEHQTFCQRTLREIKILRRFKHENIIGILDIIRPPSFESFNDVY 84 (336)
T ss_pred cceEEEEEEEecCCeEEEEEEEcCCCCeEEEEEecccccchhHHHHHHHHHHHHhCCCCCcCchhheeecccccccceEE
Confidence 4699999999999999999999999999999988531 12244699999999999999999987554444455689
Q ss_pred EEeeechhhHHHHhhhhhhcCCCcCHHHHHHHHHHHHHHHHHHHhhCCcccCCCCCCceEEcCCCCcEEEeeecCccccC
Q 011138 212 LVLEYISETVYRVSKHYTRMNQHVPILYVQLYTYQICRALNYLHHVVGVCHRDIKPQNLLVNPHTHQLKICDFGSAKMLV 291 (492)
Q Consensus 212 lV~E~~~~~l~~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~yLH~~~givHrDlKp~NILl~~~~~~vkL~DFG~a~~~~ 291 (492)
+|+||+.+++...+. ...+++..++.++.||+.||.|||+ .||+||||||+|||++.++ .+||+|||++....
T Consensus 85 lv~e~~~~~l~~~~~-----~~~l~~~~~~~i~~ql~~aL~~LH~-~~ivH~dlkp~Nill~~~~-~~kl~dfg~~~~~~ 157 (336)
T cd07849 85 IVQELMETDLYKLIK-----TQHLSNDHIQYFLYQILRGLKYIHS-ANVLHRDLKPSNLLLNTNC-DLKICDFGLARIAD 157 (336)
T ss_pred EEehhcccCHHHHHh-----cCCCCHHHHHHHHHHHHHHHHHHHh-CCeeccCCCHHHEEECCCC-CEEECcccceeecc
Confidence 999999987765443 3468999999999999999999997 9999999999999999887 79999999987653
Q ss_pred CCCC----CccceeccCccCchhhcCCCCCCcchhhHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCCHHHHhhc
Q 011138 292 PGEP----NISYICSRYYRAPELIFGATEYTTAIDMWSIGCVLAELLLGQPLFPGESGVDQLVEIIKILGTPTREEIKCM 367 (492)
Q Consensus 292 ~~~~----~~~~~gt~~y~aPE~~~~~~~~~~~~DvwSlGvil~ell~G~~pf~~~~~~~~~~~i~~~~g~p~~~~~~~~ 367 (492)
.... .....||+.|+|||.+.+...++.++|||||||++|+|++|++||.+.+....+..+...++.|..+.+...
T Consensus 158 ~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~DvwslGvil~el~~G~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~ 237 (336)
T cd07849 158 PEHDHTGFLTEYVATRWYRAPEIMLNSKGYTKAIDIWSVGCILAEMLSNRPLFPGKDYLHQLNLILGVLGTPSQEDLNCI 237 (336)
T ss_pred ccccccCCcCCcCcCCCccChHHhhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHcCCCCHHHHHHh
Confidence 3221 123578999999999866666899999999999999999999999998888888888888998887766443
Q ss_pred CCCCccc---CCCcccCCCcccccCCCCChhHhhhhccccccCCCCcCCHHHhhCCCCCCCCCCCCCCCCCCCCCCCCCC
Q 011138 368 NPNYTEF---KFPQIKAHPWHKIFHKRMPPEALDLVSRLLQYSPSLRCTALEACAHPFFDDLRDPNTCLPNGRPLPTLFN 444 (492)
Q Consensus 368 ~~~~~~~---~~~~~~~~~~~~~~~~~~s~~~~~Li~~~L~~dP~~R~t~~e~l~Hp~f~~~~~~~~~~~~~~~~~~~~~ 444 (492)
....... ..+.....++.. ..+.+++++.+||.+||+.||.+|||+.++++||||+.+.++........+ ..+.
T Consensus 238 ~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~li~~~l~~dP~~Rpt~~e~l~hp~~~~~~~~~~~~~~~~~--~~~~ 314 (336)
T cd07849 238 ISLRARNYIKSLPFKPKVPWNK-LFPNADPKALDLLDKMLTFNPHKRITVEEALAHPYLEQYHDPSDEPVAEEP--FPFD 314 (336)
T ss_pred hchhhhhHHhhcCcCCcccHHH-HhcccCcHHHHHHHHHcCCChhhCcCHHHHhcCccccccCCCCCcccCCCC--CChh
Confidence 2111100 011111111211 123468899999999999999999999999999999998875443222122 1222
Q ss_pred CCcccccccccccccccccccCccchhHHHhcCCHHHHhhcccccccC
Q 011138 445 FTAQGKLILCFSYFGFSSYFLPHANCLAELAGASNELRQRLIPEHARK 492 (492)
Q Consensus 445 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 492 (492)
|. ++...+.|.++++|.+++++
T Consensus 315 ~~--------------------------~~~~~~~~~~~~~~~~~~~~ 336 (336)
T cd07849 315 FE--------------------------LFDDLPKEKLKELIFEEIMR 336 (336)
T ss_pred hc--------------------------cccccCHHHHHHHHHHHhcC
Confidence 22 44567899999999988764
No 58
>cd05628 STKc_NDR1 Catalytic domain of the Protein Serine/Threonine Kinase, Nuclear Dbf2-Related kinase 1. Serine/Threonine Kinases (STKs), NDR kinase subfamily, NDR1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. Higher eukaryotes contain two NDR isoforms, NDR1 and NDR2. Both isoforms play a role in proper centrosome duplication. NDR1 is highly expressed in thymus, mus
Probab=100.00 E-value=4.3e-46 Score=377.96 Aligned_cols=253 Identities=26% Similarity=0.407 Sum_probs=204.0
Q ss_pred ceeEeeeeccCCceEEEEEEEcCCCCEEEEEEeccch-------hhHHHHHHHHHHcCCCCccccceeeeeccCCCceEE
Q 011138 138 SYMAERVVGTGSFGVVFQAKCLETGDSVAIKKVLQDK-------RYKNRELQIMRLLNHPNVVSLKHCFFSTTEKDELYL 210 (492)
Q Consensus 138 ~y~~~~~lG~G~fg~Vy~~~~~~~g~~vAiK~~~~~~-------~~~~~E~~il~~l~h~nIv~l~~~~~~~~~~~~~~~ 210 (492)
+|.+.+.||+|+||+||+|.+..+|+.||||++.+.. ....+|+.+++.++|+||+++++++ .+..++
T Consensus 2 ~y~~~~~LG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~il~~~~~~~iv~~~~~~-----~~~~~~ 76 (363)
T cd05628 2 DFESLKVIGRGAFGEVRLVQKKDTGHVYAMKILRKADMLEKEQVGHIRAERDILVEADSLWVVKMFYSF-----QDKLNL 76 (363)
T ss_pred CceEeEEEEeCCCEEEEEEEECCCCCEEEEEEEEHHHHHHhhHHHHHHHHHHHHHhCCCCCcceEEEEE-----ecCCeE
Confidence 5899999999999999999999999999999986432 2345799999999999999999988 455579
Q ss_pred EEEeeechhh-HHHHhhhhhhcCCCcCHHHHHHHHHHHHHHHHHHHhhCCcccCCCCCCceEEcCCCCcEEEeeecCccc
Q 011138 211 NLVLEYISET-VYRVSKHYTRMNQHVPILYVQLYTYQICRALNYLHHVVGVCHRDIKPQNLLVNPHTHQLKICDFGSAKM 289 (492)
Q Consensus 211 ~lV~E~~~~~-l~~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~yLH~~~givHrDlKp~NILl~~~~~~vkL~DFG~a~~ 289 (492)
|+||||++++ +...+. ....+++..++.++.||+.||+|||+ +||+||||||+|||++.++ .+||+|||+++.
T Consensus 77 ~lv~E~~~gg~L~~~l~----~~~~l~~~~~~~~~~qi~~aL~~lH~-~givHrDlKp~NILi~~~~-~vkL~DFGla~~ 150 (363)
T cd05628 77 YLIMEFLPGGDMMTLLM----KKDTLTEEETQFYIAETVLAIDSIHQ-LGFIHRDIKPDNLLLDSKG-HVKLSDFGLCTG 150 (363)
T ss_pred EEEEcCCCCCcHHHHHH----hcCCCCHHHHHHHHHHHHHHHHHHHh-CCeEecCCCHHHeEECCCC-CEEEeeccCccc
Confidence 9999999865 444332 24568999999999999999999997 9999999999999999887 799999999875
Q ss_pred cCCCC------------------------------------CCccceeccCccCchhhcCCCCCCcchhhHHHHHHHHHH
Q 011138 290 LVPGE------------------------------------PNISYICSRYYRAPELIFGATEYTTAIDMWSIGCVLAEL 333 (492)
Q Consensus 290 ~~~~~------------------------------------~~~~~~gt~~y~aPE~~~~~~~~~~~~DvwSlGvil~el 333 (492)
..... .....+||+.|+|||++.+. .++.++|||||||++|||
T Consensus 151 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~Y~aPE~~~~~-~~~~~~DvwSlGvil~el 229 (363)
T cd05628 151 LKKAHRTEFYRNLNHSLPSDFTFQNMNSKRKAETWKRNRRQLAFSTVGTPDYIAPEVFMQT-GYNKLCDWWSLGVIMYEM 229 (363)
T ss_pred ccccccccccccccccccccccccccccccccchhhhccccccccccCCccccCHHHHcCC-CCCCchhhhhhHHHHHHH
Confidence 42211 01245799999999999765 489999999999999999
Q ss_pred HhCCCCCCCCChHHHHHHHHHHhCCCCHHHHhhcCCCCcccCCCcccCCCcccccCCCCChhHhhhhccccccCCC---C
Q 011138 334 LLGQPLFPGESGVDQLVEIIKILGTPTREEIKCMNPNYTEFKFPQIKAHPWHKIFHKRMPPEALDLVSRLLQYSPS---L 410 (492)
Q Consensus 334 l~G~~pf~~~~~~~~~~~i~~~~g~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~Li~~~L~~dP~---~ 410 (492)
++|++||.+.+..+.+.++.... ....+|.. ..+++++++||.+|+. +|. .
T Consensus 230 l~G~~Pf~~~~~~~~~~~i~~~~---------------~~~~~p~~----------~~~s~~~~~li~~l~~-~~~~r~~ 283 (363)
T cd05628 230 LIGYPPFCSETPQETYKKVMNWK---------------ETLIFPPE----------VPISEKAKDLILRFCC-EWEHRIG 283 (363)
T ss_pred HhCCCCCCCCCHHHHHHHHHcCc---------------CcccCCCc----------CCCCHHHHHHHHHHcC-ChhhcCC
Confidence 99999999888776666654411 01112210 1368999999999775 454 4
Q ss_pred cCCHHHhhCCCCCCCCCC
Q 011138 411 RCTALEACAHPFFDDLRD 428 (492)
Q Consensus 411 R~t~~e~l~Hp~f~~~~~ 428 (492)
||+++|+++||||+++..
T Consensus 284 r~~~~ei~~hp~f~~~~~ 301 (363)
T cd05628 284 APGVEEIKTNPFFEGVDW 301 (363)
T ss_pred CCCHHHHhCCCCCCCCCH
Confidence 589999999999998643
No 59
>PTZ00426 cAMP-dependent protein kinase catalytic subunit; Provisional
Probab=100.00 E-value=4.7e-46 Score=373.98 Aligned_cols=251 Identities=30% Similarity=0.451 Sum_probs=206.5
Q ss_pred cccceeEeeeeccCCceEEEEEEEcCCC-CEEEEEEeccch-------hhHHHHHHHHHHcCCCCccccceeeeeccCCC
Q 011138 135 QTISYMAERVVGTGSFGVVFQAKCLETG-DSVAIKKVLQDK-------RYKNRELQIMRLLNHPNVVSLKHCFFSTTEKD 206 (492)
Q Consensus 135 ~~~~y~~~~~lG~G~fg~Vy~~~~~~~g-~~vAiK~~~~~~-------~~~~~E~~il~~l~h~nIv~l~~~~~~~~~~~ 206 (492)
...+|.+.+.||+|+||.||+|.+..++ ..||+|.+.... ....+|+.+++.++||||+++++++ .+
T Consensus 28 ~~~~y~~~~~ig~G~~g~Vy~a~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~Iv~~~~~~-----~~ 102 (340)
T PTZ00426 28 KYEDFNFIRTLGTGSFGRVILATYKNEDFPPVAIKRFEKSKIIKQKQVDHVFSERKILNYINHPFCVNLYGSF-----KD 102 (340)
T ss_pred ChhhcEEEEEEeecCCeEEEEEEEECCCCeEEEEEEEEHHHhhhhhhHHHHHHHHHHHHhCCCCCCcceEEEE-----Ee
Confidence 4457999999999999999999876655 689999885432 2345799999999999999999998 44
Q ss_pred ceEEEEEeeechhh-HHHHhhhhhhcCCCcCHHHHHHHHHHHHHHHHHHHhhCCcccCCCCCCceEEcCCCCcEEEeeec
Q 011138 207 ELYLNLVLEYISET-VYRVSKHYTRMNQHVPILYVQLYTYQICRALNYLHHVVGVCHRDIKPQNLLVNPHTHQLKICDFG 285 (492)
Q Consensus 207 ~~~~~lV~E~~~~~-l~~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~yLH~~~givHrDlKp~NILl~~~~~~vkL~DFG 285 (492)
..++|+||||+.++ +...+. ....+++..+..++.||+.||.|||+ +||+||||||+|||++.++ .+||+|||
T Consensus 103 ~~~~~lv~Ey~~~g~L~~~i~----~~~~~~~~~~~~~~~qi~~aL~~LH~-~~ivHrDLkp~NILl~~~~-~ikL~DFG 176 (340)
T PTZ00426 103 ESYLYLVLEFVIGGEFFTFLR----RNKRFPNDVGCFYAAQIVLIFEYLQS-LNIVYRDLKPENLLLDKDG-FIKMTDFG 176 (340)
T ss_pred CCEEEEEEeCCCCCcHHHHHH----HcCCCCHHHHHHHHHHHHHHHHHHHH-CCeEccCCCHHHEEECCCC-CEEEecCC
Confidence 45689999999765 444332 24568899999999999999999997 9999999999999999887 79999999
Q ss_pred CccccCCCCCCccceeccCccCchhhcCCCCCCcchhhHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCCHHHHh
Q 011138 286 SAKMLVPGEPNISYICSRYYRAPELIFGATEYTTAIDMWSIGCVLAELLLGQPLFPGESGVDQLVEIIKILGTPTREEIK 365 (492)
Q Consensus 286 ~a~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DvwSlGvil~ell~G~~pf~~~~~~~~~~~i~~~~g~p~~~~~~ 365 (492)
+++.... ......||+.|+|||++.+. .++.++|||||||++|||++|.+||.+.+.......+...
T Consensus 177 ~a~~~~~--~~~~~~gt~~y~aPE~~~~~-~~~~~~DiwSlGvil~ell~G~~Pf~~~~~~~~~~~i~~~---------- 243 (340)
T PTZ00426 177 FAKVVDT--RTYTLCGTPEYIAPEILLNV-GHGKAADWWTLGIFIYEILVGCPPFYANEPLLIYQKILEG---------- 243 (340)
T ss_pred CCeecCC--CcceecCChhhcCHHHHhCC-CCCccccccchhhHHHHHhcCCCCCCCCCHHHHHHHHhcC----------
Confidence 9986532 23456899999999999654 4899999999999999999999999987766555554331
Q ss_pred hcCCCCcccCCCcccCCCcccccCCCCChhHhhhhccccccCCCCcC-----CHHHhhCCCCCCCCCC
Q 011138 366 CMNPNYTEFKFPQIKAHPWHKIFHKRMPPEALDLVSRLLQYSPSLRC-----TALEACAHPFFDDLRD 428 (492)
Q Consensus 366 ~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~Li~~~L~~dP~~R~-----t~~e~l~Hp~f~~~~~ 428 (492)
... ++..+++++++||++||+.||.+|+ ++.++++||||+++..
T Consensus 244 -------~~~------------~p~~~~~~~~~li~~~l~~dp~~R~~~~~~~~~~~~~hp~f~~~~~ 292 (340)
T PTZ00426 244 -------IIY------------FPKFLDNNCKHLMKKLLSHDLTKRYGNLKKGAQNVKEHPWFGNIDW 292 (340)
T ss_pred -------CCC------------CCCCCCHHHHHHHHHHcccCHHHcCCCCCCCHHHHHcCCCcCCCCH
Confidence 111 2235788999999999999999996 8999999999997643
No 60
>cd05599 STKc_NDR_like Catalytic domain of Nuclear Dbf2-Related kinase-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Nuclear Dbf2-Related (NDR) kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. NDR kinases regulate mitosis, cell growth, embryonic development, and neurological processes. They are also required for proper centrosome duplica
Probab=100.00 E-value=4.5e-46 Score=377.95 Aligned_cols=253 Identities=30% Similarity=0.491 Sum_probs=205.4
Q ss_pred ceeEeeeeccCCceEEEEEEEcCCCCEEEEEEeccch-------hhHHHHHHHHHHcCCCCccccceeeeeccCCCceEE
Q 011138 138 SYMAERVVGTGSFGVVFQAKCLETGDSVAIKKVLQDK-------RYKNRELQIMRLLNHPNVVSLKHCFFSTTEKDELYL 210 (492)
Q Consensus 138 ~y~~~~~lG~G~fg~Vy~~~~~~~g~~vAiK~~~~~~-------~~~~~E~~il~~l~h~nIv~l~~~~~~~~~~~~~~~ 210 (492)
+|.+.+.||+|+||.||+|++..+|+.||||++.... ....+|+.+++.++||||++++++| .+..++
T Consensus 2 ~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~il~~l~h~~iv~~~~~~-----~~~~~~ 76 (364)
T cd05599 2 DFESIKVIGRGAFGEVRLVQKKDTGHIYAMKKLRKSEMLEKEQVAHVRAERDILAEADNPWVVKLYYSF-----QDENYL 76 (364)
T ss_pred CceEEEEEEecCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCCCCCcceEEEE-----EcCCeE
Confidence 5999999999999999999999999999999986432 2345799999999999999999988 455579
Q ss_pred EEEeeechhh-HHHHhhhhhhcCCCcCHHHHHHHHHHHHHHHHHHHhhCCcccCCCCCCceEEcCCCCcEEEeeecCccc
Q 011138 211 NLVLEYISET-VYRVSKHYTRMNQHVPILYVQLYTYQICRALNYLHHVVGVCHRDIKPQNLLVNPHTHQLKICDFGSAKM 289 (492)
Q Consensus 211 ~lV~E~~~~~-l~~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~yLH~~~givHrDlKp~NILl~~~~~~vkL~DFG~a~~ 289 (492)
|+||||+.++ |.+.+. ....+++..++.++.||+.||+|||+ +||+||||||+|||++.++ .+||+|||+++.
T Consensus 77 ~lv~E~~~~g~L~~~l~----~~~~l~~~~~~~~~~qi~~aL~~lH~-~~ivH~Dlkp~NIl~~~~~-~~kl~Dfg~~~~ 150 (364)
T cd05599 77 YLIMEYLPGGDMMTLLM----KKDTFTEEETRFYIAETILAIDSIHK-LGYIHRDIKPDNLLLDAKG-HIKLSDFGLCTG 150 (364)
T ss_pred EEEECCCCCcHHHHHHH----HcCCCCHHHHHHHHHHHHHHHHHHHH-CCeEeccCCHHHeEECCCC-CEEEeeccccee
Confidence 9999999865 444332 23568999999999999999999997 9999999999999999888 799999999875
Q ss_pred cCCCC---------------------------------------CCccceeccCccCchhhcCCCCCCcchhhHHHHHHH
Q 011138 290 LVPGE---------------------------------------PNISYICSRYYRAPELIFGATEYTTAIDMWSIGCVL 330 (492)
Q Consensus 290 ~~~~~---------------------------------------~~~~~~gt~~y~aPE~~~~~~~~~~~~DvwSlGvil 330 (492)
+.... .....+||+.|+|||++.+. .++.++|||||||++
T Consensus 151 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~~DiwSlG~il 229 (364)
T cd05599 151 LKKSHRTEFYRILSHALPSNFLDFISKPMSSKRKAETWKRNRRALAYSTVGTPDYIAPEVFLQT-GYNKECDWWSLGVIM 229 (364)
T ss_pred ccccccccccccccccccccccccccccccccccccchhhcccccccccccCccccCHHHHcCC-CCCCeeeeecchhHH
Confidence 42211 01134699999999998654 589999999999999
Q ss_pred HHHHhCCCCCCCCChHHHHHHHHHHhCCCCHHHHhhcCCCCcccCCCcccCCCcccccCCCCChhHhhhhccccccCCCC
Q 011138 331 AELLLGQPLFPGESGVDQLVEIIKILGTPTREEIKCMNPNYTEFKFPQIKAHPWHKIFHKRMPPEALDLVSRLLQYSPSL 410 (492)
Q Consensus 331 ~ell~G~~pf~~~~~~~~~~~i~~~~g~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~Li~~~L~~dP~~ 410 (492)
|||++|.+||.+.+..+.+..+.... ....+|. ...+++++++||.+||. ||.+
T Consensus 230 ~el~~G~~Pf~~~~~~~~~~~i~~~~---------------~~~~~~~----------~~~~s~~~~~li~~ll~-~p~~ 283 (364)
T cd05599 230 YEMLVGYPPFCSDNPQETYRKIINWK---------------ETLQFPD----------EVPLSPEAKDLIKRLCC-EAER 283 (364)
T ss_pred HHhhcCCCCCCCCCHHHHHHHHHcCC---------------CccCCCC----------CCCCCHHHHHHHHHHcc-CHhh
Confidence 99999999999887766655554310 0111111 11468999999999997 9999
Q ss_pred cCC---HHHhhCCCCCCCCCC
Q 011138 411 RCT---ALEACAHPFFDDLRD 428 (492)
Q Consensus 411 R~t---~~e~l~Hp~f~~~~~ 428 (492)
|++ +.++++||||+....
T Consensus 284 R~~~~~~~~ll~h~~~~~~~~ 304 (364)
T cd05599 284 RLGNNGVNEIKSHPFFKGVDW 304 (364)
T ss_pred cCCCCCHHHHhcCCCcCCCCH
Confidence 998 999999999997643
No 61
>KOG0690 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=4.2e-47 Score=353.24 Aligned_cols=256 Identities=29% Similarity=0.444 Sum_probs=218.3
Q ss_pred cccceeEeeeeccCCceEEEEEEEcCCCCEEEEEEeccchh-------hHHHHHHHHHHcCCCCccccceeeeeccCCCc
Q 011138 135 QTISYMAERVVGTGSFGVVFQAKCLETGDSVAIKKVLQDKR-------YKNRELQIMRLLNHPNVVSLKHCFFSTTEKDE 207 (492)
Q Consensus 135 ~~~~y~~~~~lG~G~fg~Vy~~~~~~~g~~vAiK~~~~~~~-------~~~~E~~il~~l~h~nIv~l~~~~~~~~~~~~ 207 (492)
...+|...++||+|.||.|-+|+.+.+|+.||||+++++.- ....|-++|+..+||.+..|.-.| +..
T Consensus 166 Tm~dFdfLKvLGkGTFGKVIL~rEKat~k~YAiKIlkKeviiakdEVAHTlTE~RVL~~~~HPFLt~LKYsF-----Qt~ 240 (516)
T KOG0690|consen 166 TMEDFDFLKVLGKGTFGKVILCREKATGKLYAIKILKKEVIIAKDEVAHTLTENRVLQNCRHPFLTSLKYSF-----QTQ 240 (516)
T ss_pred ccchhhHHHHhcCCccceEEEEeecccCceeehhhhhhhheeehHHhhhhhhHHHHHHhccCcHHHHhhhhh-----ccC
Confidence 34578999999999999999999999999999998866432 223588999999999999988777 455
Q ss_pred eEEEEEeeechhhHHHHhhhhhhcCCCcCHHHHHHHHHHHHHHHHHHHhhCCcccCCCCCCceEEcCCCCcEEEeeecCc
Q 011138 208 LYLNLVLEYISETVYRVSKHYTRMNQHVPILYVQLYTYQICRALNYLHHVVGVCHRDIKPQNLLVNPHTHQLKICDFGSA 287 (492)
Q Consensus 208 ~~~~lV~E~~~~~l~~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~yLH~~~givHrDlKp~NILl~~~~~~vkL~DFG~a 287 (492)
..+|+||||..|+-+- .+.. ....+++..+++|...|+.||.|||+ ++||+||||.+|+|+|++| .+||+|||++
T Consensus 241 drlCFVMeyanGGeLf--~HLs-rer~FsE~RtRFYGaEIvsAL~YLHs-~~ivYRDlKLENLlLDkDG-HIKitDFGLC 315 (516)
T KOG0690|consen 241 DRLCFVMEYANGGELF--FHLS-RERVFSEDRTRFYGAEIVSALGYLHS-RNIVYRDLKLENLLLDKDG-HIKITDFGLC 315 (516)
T ss_pred ceEEEEEEEccCceEe--eehh-hhhcccchhhhhhhHHHHHHhhhhhh-CCeeeeechhhhheeccCC-ceEeeecccc
Confidence 5699999999976332 2322 25679999999999999999999997 9999999999999999999 5999999999
Q ss_pred cccC-CCCCCccceeccCccCchhhcCCCCCCcchhhHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCCHHHHhh
Q 011138 288 KMLV-PGEPNISYICSRYYRAPELIFGATEYTTAIDMWSIGCVLAELLLGQPLFPGESGVDQLVEIIKILGTPTREEIKC 366 (492)
Q Consensus 288 ~~~~-~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DvwSlGvil~ell~G~~pf~~~~~~~~~~~i~~~~g~p~~~~~~~ 366 (492)
+.-. .+....++||||.|+|||++.. ..|+.++|+|.+||++|||++|+.||...+....+..|+.
T Consensus 316 KE~I~~g~t~kTFCGTPEYLAPEVleD-nDYgraVDWWG~GVVMYEMmCGRLPFyn~dh~kLFeLIl~------------ 382 (516)
T KOG0690|consen 316 KEEIKYGDTTKTFCGTPEYLAPEVLED-NDYGRAVDWWGVGVVMYEMMCGRLPFYNKDHEKLFELILM------------ 382 (516)
T ss_pred hhcccccceeccccCChhhcCchhhcc-ccccceeehhhhhHHHHHHHhccCcccccchhHHHHHHHh------------
Confidence 7643 3455668999999999999965 4599999999999999999999999999988877777765
Q ss_pred cCCCCcccCCCcccCCCcccccCCCCChhHhhhhccccccCCCCcCC-----HHHhhCCCCCCCCCCCC
Q 011138 367 MNPNYTEFKFPQIKAHPWHKIFHKRMPPEALDLVSRLLQYSPSLRCT-----ALEACAHPFFDDLRDPN 430 (492)
Q Consensus 367 ~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~Li~~~L~~dP~~R~t-----~~e~l~Hp~f~~~~~~~ 430 (492)
.+++|| ..++++++.|+..+|.+||.+|.. +.|+++|+||..+....
T Consensus 383 -----ed~kFP------------r~ls~eAktLLsGLL~kdP~kRLGgGpdDakEi~~h~FF~~v~W~~ 434 (516)
T KOG0690|consen 383 -----EDLKFP------------RTLSPEAKTLLSGLLKKDPKKRLGGGPDDAKEIMRHRFFASVDWEA 434 (516)
T ss_pred -----hhccCC------------ccCCHHHHHHHHHHhhcChHhhcCCCchhHHHHHhhhhhccCCHHH
Confidence 455555 478999999999999999999984 88999999999877643
No 62
>KOG0604 consensus MAP kinase-activated protein kinase 2 [Signal transduction mechanisms]
Probab=100.00 E-value=2.3e-47 Score=351.76 Aligned_cols=264 Identities=28% Similarity=0.464 Sum_probs=211.1
Q ss_pred ceeEe-eeeccCCceEEEEEEEcCCCCEEEEEEeccchhhHHHHHHHHHHc-CCCCccccceeeeeccCCCceEEEEEee
Q 011138 138 SYMAE-RVVGTGSFGVVFQAKCLETGDSVAIKKVLQDKRYKNRELQIMRLL-NHPNVVSLKHCFFSTTEKDELYLNLVLE 215 (492)
Q Consensus 138 ~y~~~-~~lG~G~fg~Vy~~~~~~~g~~vAiK~~~~~~~~~~~E~~il~~l-~h~nIv~l~~~~~~~~~~~~~~~~lV~E 215 (492)
+|.+. ++||-|--|.|..|..+.||+.+|+|++.. ....++|+++.-+. .|||||.++++|...- .+..++.+|||
T Consensus 62 dY~is~qvLG~GinGkV~~C~~k~T~ekfALKvL~D-s~KARrEVeLHw~~s~h~~iV~IidVyeNs~-~~rkcLLiVmE 139 (400)
T KOG0604|consen 62 DYSISWQVLGAGINGKVVQCVHKRTQEKFALKVLLD-SPKARREVELHWMASGHPHIVSIIDVYENSY-QGRKCLLIVME 139 (400)
T ss_pred hheehhhhhccccCCceEEEEeccchhhhHHHHHhc-CHHHHhHhhhhhhhcCCCceEEeehhhhhhc-cCceeeEeeee
Confidence 45554 579999999999999999999999997644 44456799886555 5999999999974433 56778889999
Q ss_pred echhh-HHHHhhhhhhcCCCcCHHHHHHHHHHHHHHHHHHHhhCCcccCCCCCCceEEcCCC--CcEEEeeecCccccCC
Q 011138 216 YISET-VYRVSKHYTRMNQHVPILYVQLYTYQICRALNYLHHVVGVCHRDIKPQNLLVNPHT--HQLKICDFGSAKMLVP 292 (492)
Q Consensus 216 ~~~~~-l~~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~yLH~~~givHrDlKp~NILl~~~~--~~vkL~DFG~a~~~~~ 292 (492)
+++|+ |+..+. .+..+.|++.++..|+.||+.|+.|||+ .+|.||||||||+|..... ..+||+|||+|+....
T Consensus 140 ~meGGeLfsriq--~~g~~afTErea~eI~~qI~~Av~~lH~-~nIAHRDlKpENLLyt~t~~na~lKLtDfGFAK~t~~ 216 (400)
T KOG0604|consen 140 CMEGGELFSRIQ--DRGDQAFTEREASEIMKQIGLAVRYLHS-MNIAHRDLKPENLLYTTTSPNAPLKLTDFGFAKETQE 216 (400)
T ss_pred cccchHHHHHHH--HcccccchHHHHHHHHHHHHHHHHHHHh-cchhhccCChhheeeecCCCCcceEecccccccccCC
Confidence 99975 444332 3345679999999999999999999997 8999999999999996433 2699999999998766
Q ss_pred CCCCccceeccCccCchhhcCCCCCCcchhhHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCCHHHHhhcCCCCc
Q 011138 293 GEPNISYICSRYYRAPELIFGATEYTTAIDMWSIGCVLAELLLGQPLFPGESGVDQLVEIIKILGTPTREEIKCMNPNYT 372 (492)
Q Consensus 293 ~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DvwSlGvil~ell~G~~pf~~~~~~~~~~~i~~~~g~p~~~~~~~~~~~~~ 372 (492)
.....+.+.||+|.|||++ |...|+..+|+||+||++|.||+|.+||........---+...+ .. .
T Consensus 217 ~~~L~TPc~TPyYvaPevl-g~eKydkscdmwSlgVimYIlLCGyPPFYS~hg~aispgMk~rI----------~~---g 282 (400)
T KOG0604|consen 217 PGDLMTPCFTPYYVAPEVL-GPEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAISPGMKRRI----------RT---G 282 (400)
T ss_pred CccccCCcccccccCHHHh-CchhcCCCCCccchhHHHHHhhcCCCcccccCCccCChhHHhHh----------hc---c
Confidence 6667788999999999998 66779999999999999999999999998766432111111100 01 3
Q ss_pred ccCCCcccCCCcccccCCCCChhHhhhhccccccCCCCcCCHHHhhCCCCCCCCCC
Q 011138 373 EFKFPQIKAHPWHKIFHKRMPPEALDLVSRLLQYSPSLRCTALEACAHPFFDDLRD 428 (492)
Q Consensus 373 ~~~~~~~~~~~~~~~~~~~~s~~~~~Li~~~L~~dP~~R~t~~e~l~Hp~f~~~~~ 428 (492)
.+.||.. . |..+|++++|+|++||..+|.+|+|+.++++|||+.+...
T Consensus 283 qy~FP~p---E-----Ws~VSe~aKdlIR~LLkt~PteRlTI~~~m~hpwi~~~~~ 330 (400)
T KOG0604|consen 283 QYEFPEP---E-----WSCVSEAAKDLIRKLLKTEPTERLTIEEVMDHPWINQYEA 330 (400)
T ss_pred CccCCCh---h-----HhHHHHHHHHHHHHHhcCCchhheeHHHhhcCchhccccc
Confidence 4455542 2 3468999999999999999999999999999999987653
No 63
>cd07839 STKc_CDK5 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 5. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 5 (CDK5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK5 is unusual in that it is regulated by non-cyclin proteins, p35 and p39. It is highly expressed in the nervous system and is critical in normal neural development and function. It plays a role in neuronal migration and differentiation, and is also
Probab=100.00 E-value=2e-45 Score=359.84 Aligned_cols=276 Identities=34% Similarity=0.545 Sum_probs=219.5
Q ss_pred ceeEeeeeccCCceEEEEEEEcCCCCEEEEEEeccch------hhHHHHHHHHHHcCCCCccccceeeeeccCCCceEEE
Q 011138 138 SYMAERVVGTGSFGVVFQAKCLETGDSVAIKKVLQDK------RYKNRELQIMRLLNHPNVVSLKHCFFSTTEKDELYLN 211 (492)
Q Consensus 138 ~y~~~~~lG~G~fg~Vy~~~~~~~g~~vAiK~~~~~~------~~~~~E~~il~~l~h~nIv~l~~~~~~~~~~~~~~~~ 211 (492)
+|.+.+.||+|+||.||+|.+..+|+.||+|.+.... ....+|+.+++.++||||+++++++ .+..+++
T Consensus 1 ~y~~~~~l~~g~~~~vy~~~~~~~g~~~~~k~~~~~~~~~~~~~~~~~ei~~l~~l~h~~i~~~~~~~-----~~~~~~~ 75 (284)
T cd07839 1 KYEKLEKIGEGTYGTVFKAKNRETHEIVALKRVRLDDDDEGVPSSALREICLLKELKHKNIVRLYDVL-----HSDKKLT 75 (284)
T ss_pred CceeEEEecccCCeEEEEEEECCCCcEEEEEEeecccccccCccchhHHHHHHHhcCCCCeeeHHHHh-----ccCCceE
Confidence 4889999999999999999999999999999885321 2345799999999999999999998 4555689
Q ss_pred EEeeechhhHHHHhhhhhhcCCCcCHHHHHHHHHHHHHHHHHHHhhCCcccCCCCCCceEEcCCCCcEEEeeecCccccC
Q 011138 212 LVLEYISETVYRVSKHYTRMNQHVPILYVQLYTYQICRALNYLHHVVGVCHRDIKPQNLLVNPHTHQLKICDFGSAKMLV 291 (492)
Q Consensus 212 lV~E~~~~~l~~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~yLH~~~givHrDlKp~NILl~~~~~~vkL~DFG~a~~~~ 291 (492)
+|+||+++++...+.. ....+++..++.++.||+.||.|||+ +||+||||||+||+++.++ .+||+|||+++...
T Consensus 76 lv~e~~~~~l~~~~~~---~~~~~~~~~~~~~~~qi~~al~~LH~-~~i~H~dl~~~nil~~~~~-~~~l~dfg~~~~~~ 150 (284)
T cd07839 76 LVFEYCDQDLKKYFDS---CNGDIDPEIVKSFMFQLLKGLAFCHS-HNVLHRDLKPQNLLINKNG-ELKLADFGLARAFG 150 (284)
T ss_pred EEEecCCCCHHHHHHh---cCCCCCHHHHHHHHHHHHHHHHHHHH-CCEecCCCCHHHEEEcCCC-cEEECccchhhccC
Confidence 9999999887765432 23568999999999999999999997 9999999999999999887 79999999987653
Q ss_pred CCC-CCccceeccCccCchhhcCCCCCCcchhhHHHHHHHHHHHhCCCC-CCCCChHHHHHHHHHHhCCCCHHHHhhcCC
Q 011138 292 PGE-PNISYICSRYYRAPELIFGATEYTTAIDMWSIGCVLAELLLGQPL-FPGESGVDQLVEIIKILGTPTREEIKCMNP 369 (492)
Q Consensus 292 ~~~-~~~~~~gt~~y~aPE~~~~~~~~~~~~DvwSlGvil~ell~G~~p-f~~~~~~~~~~~i~~~~g~p~~~~~~~~~~ 369 (492)
... ......+++.|+|||++.+...++.++|||||||++|+|++|..| |.+.+..+.+..+.+.++.+....+.....
T Consensus 151 ~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 230 (284)
T cd07839 151 IPVRCYSAEVVTLWYRPPDVLFGAKLYSTSIDMWSAGCIFAELANAGRPLFPGNDVDDQLKRIFRLLGTPTEESWPGVSK 230 (284)
T ss_pred CCCCCcCCCccccCCcChHHHhCCcccCcHHHHHHHHHHHHHHHhcCCCCcCCCCHHHHHHHHHHHhCCCChHHhHHhhh
Confidence 222 223456789999999997766689999999999999999998877 566667777888888888877665543321
Q ss_pred CCcccCCCcccCCCcccccCCCCChhHhhhhccccccCCCCcCCHHHhhCCCCC
Q 011138 370 NYTEFKFPQIKAHPWHKIFHKRMPPEALDLVSRLLQYSPSLRCTALEACAHPFF 423 (492)
Q Consensus 370 ~~~~~~~~~~~~~~~~~~~~~~~s~~~~~Li~~~L~~dP~~R~t~~e~l~Hp~f 423 (492)
......++............+.+++++++||.+||+.||.+|||+.+++.||||
T Consensus 231 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~t~~~il~h~~f 284 (284)
T cd07839 231 LPDYKPYPMYPATTSLVNVVPKLNSTGRDLLQNLLVCNPVQRISAEEALQHPYF 284 (284)
T ss_pred cccccccCCCCCcchhhhhcccCCHHHHHHHHHHhcCChhhcCCHHHHhcCCCC
Confidence 111111222111111112234678999999999999999999999999999998
No 64
>cd05585 STKc_YPK1_like Catalytic domain of Yeast Protein Kinase 1-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Yeast protein kinase 1 (YPK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The YPK1-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of fungal proteins with similarity to the AGC STKs, Saccharomyces cerevisiae YPK1 and Schizosaccharomyces pombe Gad8p. YPK1 is required for cell growth and acts as a downstream kinase in the sphingolipid-mediated signaling pathway of yeast. It also plays a role in efficient endocytosis and in the maintenance of cell wall integrity. Gad8p is a downstream target of Tor1p, the fission yeast homolog of mTOR. It pl
Probab=100.00 E-value=8.9e-46 Score=367.85 Aligned_cols=242 Identities=31% Similarity=0.520 Sum_probs=198.8
Q ss_pred eccCCceEEEEEEEcCCCCEEEEEEeccch-------hhHHHHHHHHHHcCCCCccccceeeeeccCCCceEEEEEeeec
Q 011138 145 VGTGSFGVVFQAKCLETGDSVAIKKVLQDK-------RYKNRELQIMRLLNHPNVVSLKHCFFSTTEKDELYLNLVLEYI 217 (492)
Q Consensus 145 lG~G~fg~Vy~~~~~~~g~~vAiK~~~~~~-------~~~~~E~~il~~l~h~nIv~l~~~~~~~~~~~~~~~~lV~E~~ 217 (492)
||+|+||.||+|.+..+++.||+|++.... ....+|+.+++.++||||++++++| .+..++|+||||+
T Consensus 1 lg~G~~g~Vy~~~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~-----~~~~~~~lv~e~~ 75 (312)
T cd05585 1 IGKGSFGKVMQVRKRDTQRIYALKTIRKAHIVSRSEVTHTLAERTVLAQVNCPFIVPLKFSF-----QSPEKLYLVLAFI 75 (312)
T ss_pred CCcCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCCCcEeceeeEE-----ecCCeEEEEEcCC
Confidence 699999999999999999999999885421 2234699999999999999999988 4445689999999
Q ss_pred hhhHH-HHhhhhhhcCCCcCHHHHHHHHHHHHHHHHHHHhhCCcccCCCCCCceEEcCCCCcEEEeeecCccccCCC-CC
Q 011138 218 SETVY-RVSKHYTRMNQHVPILYVQLYTYQICRALNYLHHVVGVCHRDIKPQNLLVNPHTHQLKICDFGSAKMLVPG-EP 295 (492)
Q Consensus 218 ~~~l~-~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~yLH~~~givHrDlKp~NILl~~~~~~vkL~DFG~a~~~~~~-~~ 295 (492)
.++.+ ..+. ....+++..++.++.||+.||.|||+ +||+||||||+|||++.++ .+||+|||+++..... ..
T Consensus 76 ~~g~L~~~l~----~~~~~~~~~~~~~~~qi~~~l~~lH~-~~i~HrDlkp~Nili~~~~-~~kl~Dfg~~~~~~~~~~~ 149 (312)
T cd05585 76 NGGELFHHLQ----REGRFDLSRARFYTAELLCALENLHK-FNVIYRDLKPENILLDYQG-HIALCDFGLCKLNMKDDDK 149 (312)
T ss_pred CCCcHHHHHH----hcCCCCHHHHHHHHHHHHHHHHHHHh-CCeEeCCCCHHHeEECCCC-cEEEEECcccccCccCCCc
Confidence 87543 3332 24568899999999999999999997 9999999999999999888 7999999999754322 22
Q ss_pred CccceeccCccCchhhcCCCCCCcchhhHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCCHHHHhhcCCCCcccC
Q 011138 296 NISYICSRYYRAPELIFGATEYTTAIDMWSIGCVLAELLLGQPLFPGESGVDQLVEIIKILGTPTREEIKCMNPNYTEFK 375 (492)
Q Consensus 296 ~~~~~gt~~y~aPE~~~~~~~~~~~~DvwSlGvil~ell~G~~pf~~~~~~~~~~~i~~~~g~p~~~~~~~~~~~~~~~~ 375 (492)
....+||+.|+|||++.+. .++.++|||||||++|+|++|..||.+.+..+.+..+.. ....
T Consensus 150 ~~~~~gt~~y~aPE~~~~~-~~~~~~DvwslGvil~el~tg~~pf~~~~~~~~~~~~~~-----------------~~~~ 211 (312)
T cd05585 150 TNTFCGTPEYLAPELLLGH-GYTKAVDWWTLGVLLYEMLTGLPPFYDENVNEMYRKILQ-----------------EPLR 211 (312)
T ss_pred cccccCCcccCCHHHHcCC-CCCCccceechhHHHHHHHhCCCCcCCCCHHHHHHHHHc-----------------CCCC
Confidence 3356799999999999764 489999999999999999999999998776655544432 1111
Q ss_pred CCcccCCCcccccCCCCChhHhhhhccccccCCCCcC---CHHHhhCCCCCCCCC
Q 011138 376 FPQIKAHPWHKIFHKRMPPEALDLVSRLLQYSPSLRC---TALEACAHPFFDDLR 427 (492)
Q Consensus 376 ~~~~~~~~~~~~~~~~~s~~~~~Li~~~L~~dP~~R~---t~~e~l~Hp~f~~~~ 427 (492)
++..+++++++||.+||..||.+|| ++.++++||||.+..
T Consensus 212 ------------~~~~~~~~~~~li~~~L~~dp~~R~~~~~~~e~l~hp~~~~~~ 254 (312)
T cd05585 212 ------------FPDGFDRDAKDLLIGLLSRDPTRRLGYNGAQEIKNHPFFSQLS 254 (312)
T ss_pred ------------CCCcCCHHHHHHHHHHcCCCHHHcCCCCCHHHHHcCCCcCCCC
Confidence 2245789999999999999999997 579999999999863
No 65
>cd05629 STKc_NDR_like_fungal Catalytic domain of Fungal Nuclear Dbf2-Related kinase-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), NDR kinase subfamily, fungal NDR-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This group is composed of fungal NDR-like proteins including Saccharomyces cerevisiae CBK1 (or CBK1p), Schizosaccharomyces pombe Orb6 (or Orb6p), Ustilago maydis Ukc1 (or Ukc1p), and Neurospora crassa Cot1. Like NDR kinase, group members contain an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. CBK1 is an essential component in the RAM (regulation of
Probab=100.00 E-value=8e-46 Score=377.94 Aligned_cols=252 Identities=29% Similarity=0.477 Sum_probs=202.6
Q ss_pred ceeEeeeeccCCceEEEEEEEcCCCCEEEEEEeccch-------hhHHHHHHHHHHcCCCCccccceeeeeccCCCceEE
Q 011138 138 SYMAERVVGTGSFGVVFQAKCLETGDSVAIKKVLQDK-------RYKNRELQIMRLLNHPNVVSLKHCFFSTTEKDELYL 210 (492)
Q Consensus 138 ~y~~~~~lG~G~fg~Vy~~~~~~~g~~vAiK~~~~~~-------~~~~~E~~il~~l~h~nIv~l~~~~~~~~~~~~~~~ 210 (492)
+|.+.+.||+|+||.||+|.+..+|+.||||++.+.. ....+|+++++.++|||||+++++| .+..++
T Consensus 2 ~y~~~~~lG~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~il~~l~hp~iv~~~~~~-----~~~~~~ 76 (377)
T cd05629 2 DFHTVKVIGKGAFGEVRLVQKKDTGKIYAMKTLLKSEMFKKDQLAHVKAERDVLAESDSPWVVSLYYSF-----QDAQYL 76 (377)
T ss_pred CceEeEEEeecCCEEEEEEEECCCCCEEEEEEEEHHHHHHhHHHHHHHHHHHHHHhCCCCCcceEEEEE-----EcCCee
Confidence 5999999999999999999999999999999885432 2345799999999999999999998 455579
Q ss_pred EEEeeechhh-HHHHhhhhhhcCCCcCHHHHHHHHHHHHHHHHHHHhhCCcccCCCCCCceEEcCCCCcEEEeeecCccc
Q 011138 211 NLVLEYISET-VYRVSKHYTRMNQHVPILYVQLYTYQICRALNYLHHVVGVCHRDIKPQNLLVNPHTHQLKICDFGSAKM 289 (492)
Q Consensus 211 ~lV~E~~~~~-l~~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~yLH~~~givHrDlKp~NILl~~~~~~vkL~DFG~a~~ 289 (492)
|+||||++++ |...+. ....+++..++.++.||+.||+|||+ +||+||||||+|||++.++ .+||+|||+++.
T Consensus 77 ~lv~E~~~gg~L~~~l~----~~~~~~~~~~~~~~~ql~~aL~~LH~-~givHrDlkp~NIll~~~~-~~kl~DfGla~~ 150 (377)
T cd05629 77 YLIMEFLPGGDLMTMLI----KYDTFSEDVTRFYMAECVLAIEAVHK-LGFIHRDIKPDNILIDRGG-HIKLSDFGLSTG 150 (377)
T ss_pred EEEEeCCCCCcHHHHHH----hcCCCCHHHHHHHHHHHHHHHHHHHh-CCeeccCCCHHHEEECCCC-CEEEeecccccc
Confidence 9999999764 444332 24568899999999999999999997 9999999999999999887 799999999863
Q ss_pred cCCCC------------------------------------------------CCccceeccCccCchhhcCCCCCCcch
Q 011138 290 LVPGE------------------------------------------------PNISYICSRYYRAPELIFGATEYTTAI 321 (492)
Q Consensus 290 ~~~~~------------------------------------------------~~~~~~gt~~y~aPE~~~~~~~~~~~~ 321 (492)
..... .....+||+.|+|||++.+. .++.++
T Consensus 151 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~~ 229 (377)
T cd05629 151 FHKQHDSAYYQKLLQGKSNKNRIDNRNSVAVDSINLTMSSKDQIATWKKNRRLMAYSTVGTPDYIAPEIFLQQ-GYGQEC 229 (377)
T ss_pred cccccccccccccccccccccccccccccccccccccccchhhhhhhhhcccccccccCCCccccCHHHHccC-CCCCce
Confidence 21100 00124799999999999654 489999
Q ss_pred hhHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCCHHHHhhcCCCCcccCCCcccCCCcccccCCCCChhHhhhhc
Q 011138 322 DMWSIGCVLAELLLGQPLFPGESGVDQLVEIIKILGTPTREEIKCMNPNYTEFKFPQIKAHPWHKIFHKRMPPEALDLVS 401 (492)
Q Consensus 322 DvwSlGvil~ell~G~~pf~~~~~~~~~~~i~~~~g~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~Li~ 401 (492)
|||||||++|||++|.+||.+.+..+.+..+.... ....+|. ...++.++++||.
T Consensus 230 DiwSlGvil~elltG~~Pf~~~~~~~~~~~i~~~~---------------~~~~~p~----------~~~~s~~~~dli~ 284 (377)
T cd05629 230 DWWSLGAIMFECLIGWPPFCSENSHETYRKIINWR---------------ETLYFPD----------DIHLSVEAEDLIR 284 (377)
T ss_pred eeEecchhhhhhhcCCCCCCCCCHHHHHHHHHccC---------------CccCCCC----------CCCCCHHHHHHHH
Confidence 99999999999999999999887766655554310 1111221 1246899999999
Q ss_pred cccccCCCCc---CCHHHhhCCCCCCCCC
Q 011138 402 RLLQYSPSLR---CTALEACAHPFFDDLR 427 (492)
Q Consensus 402 ~~L~~dP~~R---~t~~e~l~Hp~f~~~~ 427 (492)
+||. +|.+| +++.++++||||+++.
T Consensus 285 ~lL~-~~~~r~~r~~~~~~l~hp~~~~~~ 312 (377)
T cd05629 285 RLIT-NAENRLGRGGAHEIKSHPFFRGVD 312 (377)
T ss_pred HHhc-CHhhcCCCCCHHHHhcCCCcCCCC
Confidence 9998 77765 5999999999998754
No 66
>cd05593 STKc_PKB_gamma Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B gamma. Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, gamma (or Akt3) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-gamma is predominantly expressed in neuronal tissues. Mice deficient in PKB-gamma show a reduction in brain weight due to the decreases in cell size and cell number. PKB-gamma has also been shown to be upregulate
Probab=100.00 E-value=1.1e-45 Score=369.81 Aligned_cols=245 Identities=27% Similarity=0.435 Sum_probs=199.5
Q ss_pred eeeccCCceEEEEEEEcCCCCEEEEEEeccch-------hhHHHHHHHHHHcCCCCccccceeeeeccCCCceEEEEEee
Q 011138 143 RVVGTGSFGVVFQAKCLETGDSVAIKKVLQDK-------RYKNRELQIMRLLNHPNVVSLKHCFFSTTEKDELYLNLVLE 215 (492)
Q Consensus 143 ~~lG~G~fg~Vy~~~~~~~g~~vAiK~~~~~~-------~~~~~E~~il~~l~h~nIv~l~~~~~~~~~~~~~~~~lV~E 215 (492)
+.||+|+||.||++.+..+|+.||||++.... ....+|+.+++.++||||+++++++ .+...+|+|||
T Consensus 1 ~~lG~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~-----~~~~~~~lv~E 75 (328)
T cd05593 1 KLLGKGTFGKVILVREKASGKYYAMKILKKEVIIAKDEVAHTLTESRVLKNTRHPFLTSLKYSF-----QTKDRLCFVME 75 (328)
T ss_pred CeeeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCCCCCcceEEEE-----EcCCEEEEEEe
Confidence 36999999999999999999999999986432 2334799999999999999999888 44556899999
Q ss_pred echhhHHHHhhhhhhcCCCcCHHHHHHHHHHHHHHHHHHHhhCCcccCCCCCCceEEcCCCCcEEEeeecCccccCCC-C
Q 011138 216 YISETVYRVSKHYTRMNQHVPILYVQLYTYQICRALNYLHHVVGVCHRDIKPQNLLVNPHTHQLKICDFGSAKMLVPG-E 294 (492)
Q Consensus 216 ~~~~~l~~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~yLH~~~givHrDlKp~NILl~~~~~~vkL~DFG~a~~~~~~-~ 294 (492)
|++++.+... ......+++..++.++.||+.||.|||+ +||+||||||+|||++.++ .+||+|||+++..... .
T Consensus 76 y~~~g~L~~~---l~~~~~l~~~~~~~~~~qi~~aL~~LH~-~~ivHrDikp~NIll~~~~-~~kL~DfG~~~~~~~~~~ 150 (328)
T cd05593 76 YVNGGELFFH---LSRERVFSEDRTRFYGAEIVSALDYLHS-GKIVYRDLKLENLMLDKDG-HIKITDFGLCKEGITDAA 150 (328)
T ss_pred CCCCCCHHHH---HHhcCCCCHHHHHHHHHHHHHHHHHHHh-CCeEecccCHHHeEECCCC-cEEEecCcCCccCCCccc
Confidence 9987644321 1224568899999999999999999997 9999999999999999887 7999999998754222 2
Q ss_pred CCccceeccCccCchhhcCCCCCCcchhhHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCCHHHHhhcCCCCccc
Q 011138 295 PNISYICSRYYRAPELIFGATEYTTAIDMWSIGCVLAELLLGQPLFPGESGVDQLVEIIKILGTPTREEIKCMNPNYTEF 374 (492)
Q Consensus 295 ~~~~~~gt~~y~aPE~~~~~~~~~~~~DvwSlGvil~ell~G~~pf~~~~~~~~~~~i~~~~g~p~~~~~~~~~~~~~~~ 374 (492)
.....+||+.|+|||++.+. .++.++|||||||++|+|++|+.||.+.+..+....+.. ...
T Consensus 151 ~~~~~~gt~~y~aPE~~~~~-~~~~~~DiwslGvil~elltG~~Pf~~~~~~~~~~~~~~-----------------~~~ 212 (328)
T cd05593 151 TMKTFCGTPEYLAPEVLEDN-DYGRAVDWWGLGVVMYEMMCGRLPFYNQDHEKLFELILM-----------------EDI 212 (328)
T ss_pred ccccccCCcCccChhhhcCC-CCCccCCccccchHHHHHhhCCCCCCCCCHHHHHHHhcc-----------------CCc
Confidence 23346799999999999654 489999999999999999999999988765544433321 111
Q ss_pred CCCcccCCCcccccCCCCChhHhhhhccccccCCCCcC-----CHHHhhCCCCCCCCC
Q 011138 375 KFPQIKAHPWHKIFHKRMPPEALDLVSRLLQYSPSLRC-----TALEACAHPFFDDLR 427 (492)
Q Consensus 375 ~~~~~~~~~~~~~~~~~~s~~~~~Li~~~L~~dP~~R~-----t~~e~l~Hp~f~~~~ 427 (492)
. ++..+++++.+||.+||+.||.+|+ ++.++++||||....
T Consensus 213 ~------------~p~~~~~~~~~li~~~L~~dP~~R~~~~~~~~~~il~h~~~~~~~ 258 (328)
T cd05593 213 K------------FPRTLSADAKSLLSGLLIKDPNKRLGGGPDDAKEIMRHSFFTGVN 258 (328)
T ss_pred c------------CCCCCCHHHHHHHHHHcCCCHHHcCCCCCCCHHHHhcCCCcCCCC
Confidence 1 2245789999999999999999997 899999999998753
No 67
>cd07867 STKc_CDC2L6 Catalytic domain of Serine/Threonine Kinase, Cell Division Cycle 2-like 6. Serine/Threonine Kinases (STKs), Cell Division Cycle 2-like 6 (CDC2L6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDC2L6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDC2L6 is also called CDK8-like and was previously referred to as CDK11. However, this is a confusing nomenclature as CDC2L6 is distinct from CDC2L1, which is represented by the two protein products from its gene, called CDK11(p110) and CDK11(p58), as well as
Probab=100.00 E-value=3.8e-45 Score=363.67 Aligned_cols=277 Identities=30% Similarity=0.555 Sum_probs=209.3
Q ss_pred eeeeccCCceEEEEEEEcC--CCCEEEEEEeccch--hhHHHHHHHHHHcCCCCccccceeeeeccCCCceEEEEEeeec
Q 011138 142 ERVVGTGSFGVVFQAKCLE--TGDSVAIKKVLQDK--RYKNRELQIMRLLNHPNVVSLKHCFFSTTEKDELYLNLVLEYI 217 (492)
Q Consensus 142 ~~~lG~G~fg~Vy~~~~~~--~g~~vAiK~~~~~~--~~~~~E~~il~~l~h~nIv~l~~~~~~~~~~~~~~~~lV~E~~ 217 (492)
+..||+|+||.||+|.+.. ++..||+|.+.... ....+|+.+++.++||||+++++++... ....+++||||+
T Consensus 6 g~~lG~G~~g~Vy~~~~~~~~~~~~~a~k~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~---~~~~~~lv~e~~ 82 (317)
T cd07867 6 GCKVGRGTYGHVYKAKRKDGKDEKEYALKQIEGTGISMSACREIALLRELKHPNVIALQKVFLSH---SDRKVWLLFDYA 82 (317)
T ss_pred ceEeccCCCeeEEEEEecCCCccceEEEEEecCCCCcHHHHHHHHHHHhCCCCCeeeEEEEEecc---CCCeEEEEEeee
Confidence 4679999999999999654 66889999886542 3456899999999999999999988543 234688999999
Q ss_pred hhhHHHHhhhhh-----hcCCCcCHHHHHHHHHHHHHHHHHHHhhCCcccCCCCCCceEEc----CCCCcEEEeeecCcc
Q 011138 218 SETVYRVSKHYT-----RMNQHVPILYVQLYTYQICRALNYLHHVVGVCHRDIKPQNLLVN----PHTHQLKICDFGSAK 288 (492)
Q Consensus 218 ~~~l~~~~~~~~-----~~~~~~~~~~~~~i~~qi~~aL~yLH~~~givHrDlKp~NILl~----~~~~~vkL~DFG~a~ 288 (492)
+++++..+.... .....+++..++.++.||+.||.|||+ +||+||||||+|||+. .++ .+||+|||+++
T Consensus 83 ~~~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~lH~-~~ivH~Dlkp~Nil~~~~~~~~~-~~kl~DfG~a~ 160 (317)
T cd07867 83 EHDLWHIIKFHRASKANKKPMQLPRSMVKSLLYQILDGIHYLHA-NWVLHRDLKPANILVMGEGPERG-RVKIADMGFAR 160 (317)
T ss_pred CCcHHHHHHhhhccccCCCCccCCHHHHHHHHHHHHHHHHHHHh-CCEEcCCCCHHHEEEccCCCCCC-cEEEeecccee
Confidence 998877654321 112357888999999999999999997 9999999999999993 334 79999999998
Q ss_pred ccCCCC----CCccceeccCccCchhhcCCCCCCcchhhHHHHHHHHHHHhCCCCCCCCCh---------HHHHHHHHHH
Q 011138 289 MLVPGE----PNISYICSRYYRAPELIFGATEYTTAIDMWSIGCVLAELLLGQPLFPGESG---------VDQLVEIIKI 355 (492)
Q Consensus 289 ~~~~~~----~~~~~~gt~~y~aPE~~~~~~~~~~~~DvwSlGvil~ell~G~~pf~~~~~---------~~~~~~i~~~ 355 (492)
...... ......||+.|+|||++.+...++.++|||||||++|||++|.+||..... ..++..+...
T Consensus 161 ~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwSlG~il~el~tg~~~f~~~~~~~~~~~~~~~~~~~~~~~~ 240 (317)
T cd07867 161 LFNSPLKPLADLDPVVVTFWYRAPELLLGARHYTKAIDIWAIGCIFAELLTSEPIFHCRQEDIKTSNPFHHDQLDRIFSV 240 (317)
T ss_pred ccCCCcccccccCcceecccccCcHHhcCCCccCcHHHHHhHHHHHHHHHhCCCCcccccccccccccccHHHHHHHHHh
Confidence 654322 123457899999999997766689999999999999999999999975432 3567778888
Q ss_pred hCCCCHHHHhhcCC--CCcccC-------CCcccCCCcccccCCCCChhHhhhhccccccCCCCcCCHHHhhCCCCC
Q 011138 356 LGTPTREEIKCMNP--NYTEFK-------FPQIKAHPWHKIFHKRMPPEALDLVSRLLQYSPSLRCTALEACAHPFF 423 (492)
Q Consensus 356 ~g~p~~~~~~~~~~--~~~~~~-------~~~~~~~~~~~~~~~~~s~~~~~Li~~~L~~dP~~R~t~~e~l~Hp~f 423 (492)
+|.+..+.+..... .+.... +................+..+++||.+||+.||.+|||+.|+|+||||
T Consensus 241 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~l~~dP~~R~t~~e~l~hp~f 317 (317)
T cd07867 241 MGFPADKDWEDIRKMPEYPTLQKDFRRTTYANSSLIKYMEKHKVKPDSKVFLLLQKLLTMDPTKRITSEQALQDPYF 317 (317)
T ss_pred cCCCChhhhhhhhhcccchhhhhhhcccccCCchhhhhhhcccCCCChHHHHHHHHHhccCcccccCHHHHhcCCCC
Confidence 88887766654321 110000 000000000111112346779999999999999999999999999998
No 68
>cd07861 STKc_CDK1_euk Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 1 from higher eukaryotes-like. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 1 (CDK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK1 from higher eukaryotes. CDK1 is also called Cell division control protein 2 (Cdc2) or p34 protein kinase, and is regulated by cyclins A, B, and E. The CDK1/cyclin A complex controls G2
Probab=100.00 E-value=3.7e-45 Score=357.90 Aligned_cols=276 Identities=34% Similarity=0.626 Sum_probs=219.9
Q ss_pred ceeEeeeeccCCceEEEEEEEcCCCCEEEEEEeccc------hhhHHHHHHHHHHcCCCCccccceeeeeccCCCceEEE
Q 011138 138 SYMAERVVGTGSFGVVFQAKCLETGDSVAIKKVLQD------KRYKNRELQIMRLLNHPNVVSLKHCFFSTTEKDELYLN 211 (492)
Q Consensus 138 ~y~~~~~lG~G~fg~Vy~~~~~~~g~~vAiK~~~~~------~~~~~~E~~il~~l~h~nIv~l~~~~~~~~~~~~~~~~ 211 (492)
+|.+.+.||+|+||.||+|.+..+|+.||||++... .....+|+.+++.++||||+++++++. +..++|
T Consensus 1 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~-----~~~~~~ 75 (285)
T cd07861 1 DYTKIEKIGEGTYGVVYKGRNKKTGQIVAMKKIRLESEEEGVPSTAIREISLLKELQHPNIVCLQDVLM-----QESRLY 75 (285)
T ss_pred CceEeeEecccCceEEEEEEECCCCcEEEEEEeccccccCCchHHHHHHHHHHHhcCCCCEeeeEEEEe-----eCCeEE
Confidence 488999999999999999999999999999987532 134567999999999999999999984 444689
Q ss_pred EEeeechhhHHHHhhhhhhcCCCcCHHHHHHHHHHHHHHHHHHHhhCCcccCCCCCCceEEcCCCCcEEEeeecCccccC
Q 011138 212 LVLEYISETVYRVSKHYTRMNQHVPILYVQLYTYQICRALNYLHHVVGVCHRDIKPQNLLVNPHTHQLKICDFGSAKMLV 291 (492)
Q Consensus 212 lV~E~~~~~l~~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~yLH~~~givHrDlKp~NILl~~~~~~vkL~DFG~a~~~~ 291 (492)
+||||+.+++...+.... .+..+++..++.++.||+.||.|||+ +||+||||||+|||++.++ .+||+|||++....
T Consensus 76 ~v~e~~~~~l~~~~~~~~-~~~~~~~~~~~~~~~qi~~~L~~lH~-~~i~H~dl~p~nil~~~~~-~~~l~dfg~~~~~~ 152 (285)
T cd07861 76 LIFEFLSMDLKKYLDSLP-KGQYMDAELVKSYLYQILQGILFCHS-RRVLHRDLKPQNLLIDNKG-VIKLADFGLARAFG 152 (285)
T ss_pred EEEecCCCCHHHHHhcCC-CCCcCCHHHHHHHHHHHHHHHHHHHh-CCeeecCCCHHHEEEcCCC-cEEECcccceeecC
Confidence 999999987766554322 23568999999999999999999997 9999999999999999887 79999999987543
Q ss_pred CCC-CCccceeccCccCchhhcCCCCCCcchhhHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCCHHHHhhcCC-
Q 011138 292 PGE-PNISYICSRYYRAPELIFGATEYTTAIDMWSIGCVLAELLLGQPLFPGESGVDQLVEIIKILGTPTREEIKCMNP- 369 (492)
Q Consensus 292 ~~~-~~~~~~gt~~y~aPE~~~~~~~~~~~~DvwSlGvil~ell~G~~pf~~~~~~~~~~~i~~~~g~p~~~~~~~~~~- 369 (492)
... ......+++.|+|||++.+...++.++|||||||++|+|++|++||.+.+..+.+..+...++.+....+.....
T Consensus 153 ~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~il~~l~tg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 232 (285)
T cd07861 153 IPVRVYTHEVVTLWYRAPEVLLGSPRYSTPVDIWSIGTIFAEMATKKPLFHGDSEIDQLFRIFRILGTPTEDVWPGVTSL 232 (285)
T ss_pred CCcccccCCcccccccChHHhcCCCCcCcHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHhCCCChhhhhcchhh
Confidence 221 223346789999999987766688999999999999999999999999988888888888888776655432210
Q ss_pred -CCcccCCCcccCCCcccccCCCCChhHhhhhccccccCCCCcCCHHHhhCCCCC
Q 011138 370 -NYTEFKFPQIKAHPWHKIFHKRMPPEALDLVSRLLQYSPSLRCTALEACAHPFF 423 (492)
Q Consensus 370 -~~~~~~~~~~~~~~~~~~~~~~~s~~~~~Li~~~L~~dP~~R~t~~e~l~Hp~f 423 (492)
++. ..++....... ......+++++++||++||+.||.+|||+.+++.||||
T Consensus 233 ~~~~-~~~~~~~~~~~-~~~~~~~~~~~~~li~~~l~~dP~~Rpt~~~ll~~~~~ 285 (285)
T cd07861 233 PDYK-NTFPKWKKGSL-RSAVKNLDEDGLDLLEKMLIYDPAKRISAKKALNHPYF 285 (285)
T ss_pred HHHH-hhccccCcchh-HHhcCCCCHHHHHHHHHHhcCChhhCCCHHHHhcCCCC
Confidence 000 01111111111 11224579999999999999999999999999999998
No 69
>cd05595 STKc_PKB_beta Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B beta. Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, beta (or Akt2) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-beta is the predominant PKB isoform expressed in insulin-responsive tissues. It plays a critical role in the regulation of glucose homeostasis. It is also implicated in muscle cell differentiation. Mice deficient in
Probab=100.00 E-value=1.5e-45 Score=367.98 Aligned_cols=245 Identities=28% Similarity=0.443 Sum_probs=200.3
Q ss_pred eeeccCCceEEEEEEEcCCCCEEEEEEeccch-------hhHHHHHHHHHHcCCCCccccceeeeeccCCCceEEEEEee
Q 011138 143 RVVGTGSFGVVFQAKCLETGDSVAIKKVLQDK-------RYKNRELQIMRLLNHPNVVSLKHCFFSTTEKDELYLNLVLE 215 (492)
Q Consensus 143 ~~lG~G~fg~Vy~~~~~~~g~~vAiK~~~~~~-------~~~~~E~~il~~l~h~nIv~l~~~~~~~~~~~~~~~~lV~E 215 (492)
+.||+|+||.||++.+..+|..||+|++.... ....+|+.+++.++||||++++++| ....++|+|||
T Consensus 1 ~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~i~~~~~~~-----~~~~~~~lv~E 75 (323)
T cd05595 1 KLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRHPFLTALKYAF-----QTHDRLCFVME 75 (323)
T ss_pred CeeeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhhHHHHHHHHHHHHHHhCCCCCCcceeeEE-----ecCCEEEEEEe
Confidence 36999999999999999999999999986432 2234699999999999999999988 44456899999
Q ss_pred echhhHHHHhhhhhhcCCCcCHHHHHHHHHHHHHHHHHHHhhCCcccCCCCCCceEEcCCCCcEEEeeecCccccCCC-C
Q 011138 216 YISETVYRVSKHYTRMNQHVPILYVQLYTYQICRALNYLHHVVGVCHRDIKPQNLLVNPHTHQLKICDFGSAKMLVPG-E 294 (492)
Q Consensus 216 ~~~~~l~~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~yLH~~~givHrDlKp~NILl~~~~~~vkL~DFG~a~~~~~~-~ 294 (492)
|++++.+... ......+++..++.++.||+.||.|||+ +||+||||||+|||++.++ .+||+|||+++..... .
T Consensus 76 ~~~~~~L~~~---l~~~~~~~~~~~~~~~~qi~~aL~~LH~-~~ivH~Dlkp~NIll~~~~-~~kL~Dfg~~~~~~~~~~ 150 (323)
T cd05595 76 YANGGELFFH---LSRERVFTEERARFYGAEIVSALEYLHS-RDVVYRDIKLENLMLDKDG-HIKITDFGLCKEGISDGA 150 (323)
T ss_pred CCCCCcHHHH---HHHcCCCCHHHHHHHHHHHHHHHHHHHH-CCeEecCCCHHHEEEcCCC-CEEecccHHhccccCCCC
Confidence 9987644321 1224568899999999999999999997 9999999999999999887 7999999998754222 2
Q ss_pred CCccceeccCccCchhhcCCCCCCcchhhHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCCHHHHhhcCCCCccc
Q 011138 295 PNISYICSRYYRAPELIFGATEYTTAIDMWSIGCVLAELLLGQPLFPGESGVDQLVEIIKILGTPTREEIKCMNPNYTEF 374 (492)
Q Consensus 295 ~~~~~~gt~~y~aPE~~~~~~~~~~~~DvwSlGvil~ell~G~~pf~~~~~~~~~~~i~~~~g~p~~~~~~~~~~~~~~~ 374 (492)
......||+.|+|||++.+. .++.++|||||||++|+|++|+.||...+.......+.. ...
T Consensus 151 ~~~~~~gt~~y~aPE~~~~~-~~~~~~DiwSlGvil~ell~g~~Pf~~~~~~~~~~~~~~-----------------~~~ 212 (323)
T cd05595 151 TMKTFCGTPEYLAPEVLEDN-DYGRAVDWWGLGVVMYEMMCGRLPFYNQDHERLFELILM-----------------EEI 212 (323)
T ss_pred ccccccCCcCcCCcccccCC-CCCchhchhhhHHHHHHHHhCCCCCCCCCHHHHHHHHhc-----------------CCC
Confidence 23356799999999999654 489999999999999999999999988776555544432 111
Q ss_pred CCCcccCCCcccccCCCCChhHhhhhccccccCCCCcC-----CHHHhhCCCCCCCCC
Q 011138 375 KFPQIKAHPWHKIFHKRMPPEALDLVSRLLQYSPSLRC-----TALEACAHPFFDDLR 427 (492)
Q Consensus 375 ~~~~~~~~~~~~~~~~~~s~~~~~Li~~~L~~dP~~R~-----t~~e~l~Hp~f~~~~ 427 (492)
. ++..+++++.+||.+||..||.+|+ ++.++++||||....
T Consensus 213 ~------------~p~~~~~~~~~li~~~L~~dP~~R~~~~~~~~~~~l~h~~~~~~~ 258 (323)
T cd05595 213 R------------FPRTLSPEAKSLLAGLLKKDPKQRLGGGPSDAKEVMEHRFFLSIN 258 (323)
T ss_pred C------------CCCCCCHHHHHHHHHHccCCHHHhCCCCCCCHHHHHcCCCcCCCC
Confidence 1 2235789999999999999999998 899999999998754
No 70
>cd05600 STKc_Sid2p_Dbf2p Catalytic domain of Fungal Sid2p- and Dbf2p-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), ROCK- and NDR-like subfamily, fungal Sid2p- and Dbf2p-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sid2p- and Dbf2p-like group is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This group contains fungal kinases including Schizosaccharomyces pombe Sid2p and Saccharomyces cerevisiae Dbf2p. Group members show similarity to NDR kinases in that they contain an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Sid2p plays a crucial role in the septum initiation network (SIN) and in the initiation of cytokinesis.
Probab=100.00 E-value=2e-45 Score=368.65 Aligned_cols=255 Identities=29% Similarity=0.470 Sum_probs=208.2
Q ss_pred ceeEeeeeccCCceEEEEEEEcCCCCEEEEEEeccch-------hhHHHHHHHHHHcCCCCccccceeeeeccCCCceEE
Q 011138 138 SYMAERVVGTGSFGVVFQAKCLETGDSVAIKKVLQDK-------RYKNRELQIMRLLNHPNVVSLKHCFFSTTEKDELYL 210 (492)
Q Consensus 138 ~y~~~~~lG~G~fg~Vy~~~~~~~g~~vAiK~~~~~~-------~~~~~E~~il~~l~h~nIv~l~~~~~~~~~~~~~~~ 210 (492)
+|.+.+.||+|+||.||+|.+..+|+.||||++.... ....+|+.+++.++||||+++++++ .+..++
T Consensus 2 ~y~~~~~ig~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~iv~~~~~~-----~~~~~~ 76 (333)
T cd05600 2 DFQILTQVGQGGYGQVFLAKKKDTGEIVALKRMKKSLLFKLNEVRHVLTERDILTTTKSEWLVKLLYAF-----QDDEYL 76 (333)
T ss_pred CcEEEEEEeecCCeEEEEEEECCCCCEEEEEEEEHHHHhhhhHHHHHHHHHHHHHhCCCCCCccEEEEE-----EcCCEE
Confidence 5999999999999999999999999999999986432 2345799999999999999999988 455578
Q ss_pred EEEeeechhh-HHHHhhhhhhcCCCcCHHHHHHHHHHHHHHHHHHHhhCCcccCCCCCCceEEcCCCCcEEEeeecCccc
Q 011138 211 NLVLEYISET-VYRVSKHYTRMNQHVPILYVQLYTYQICRALNYLHHVVGVCHRDIKPQNLLVNPHTHQLKICDFGSAKM 289 (492)
Q Consensus 211 ~lV~E~~~~~-l~~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~yLH~~~givHrDlKp~NILl~~~~~~vkL~DFG~a~~ 289 (492)
|+||||++++ +..++. ....+++..++.++.||+.||.|||+ +||+||||||+|||++.++ .+||+|||++..
T Consensus 77 ~lv~e~~~g~~L~~~l~----~~~~l~~~~~~~~~~qi~~~l~~lH~-~~ivH~dlkp~Nil~~~~~-~~kL~Dfg~a~~ 150 (333)
T cd05600 77 YLAMEYVPGGDFRTLLN----NLGVLSEDHARFYMAEMFEAVDALHE-LGYIHRDLKPENFLIDASG-HIKLTDFGLSKG 150 (333)
T ss_pred EEEEeCCCCCCHHHHHH----HcCCCCHHHHHHHHHHHHHHHHHHHH-CCccccCCCHHHEEECCCC-CEEEEeCcCCcc
Confidence 9999999865 444332 23568899999999999999999997 9999999999999999887 799999999976
Q ss_pred cCCCCCCccceeccCccCchhhcCCCCCCcchhhHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCCHHHHhhcCC
Q 011138 290 LVPGEPNISYICSRYYRAPELIFGATEYTTAIDMWSIGCVLAELLLGQPLFPGESGVDQLVEIIKILGTPTREEIKCMNP 369 (492)
Q Consensus 290 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DvwSlGvil~ell~G~~pf~~~~~~~~~~~i~~~~g~p~~~~~~~~~~ 369 (492)
... ......||+.|+|||++.+. .++.++|||||||++|||++|.+||.+.+..+....+......
T Consensus 151 ~~~--~~~~~~gt~~y~aPE~~~~~-~~~~~~DvwslG~il~ell~g~~pf~~~~~~~~~~~i~~~~~~----------- 216 (333)
T cd05600 151 IVT--YANSVVGSPDYMAPEVLRGK-GYDFTVDYWSLGCMLYEFLCGFPPFSGSTPNETWENLKYWKET----------- 216 (333)
T ss_pred ccc--ccCCcccCccccChhHhcCC-CCCCccceecchHHHhhhhhCCCCCCCCCHHHHHHHHHhcccc-----------
Confidence 533 33456899999999999765 5899999999999999999999999988776665555431100
Q ss_pred CCcccCCCcccCCCcccccCCCCChhHhhhhccccccCCCCcCCHHHhhCCCCCCCCC
Q 011138 370 NYTEFKFPQIKAHPWHKIFHKRMPPEALDLVSRLLQYSPSLRCTALEACAHPFFDDLR 427 (492)
Q Consensus 370 ~~~~~~~~~~~~~~~~~~~~~~~s~~~~~Li~~~L~~dP~~R~t~~e~l~Hp~f~~~~ 427 (492)
...|.... ....+++++.+||.+||..+|.+|+++.++++||||+++.
T Consensus 217 ----~~~~~~~~------~~~~~s~~~~~li~~~l~~~~~rr~s~~~ll~h~~~~~~~ 264 (333)
T cd05600 217 ----LQRPVYDD------PRFNLSDEAWDLITKLINDPSRRFGSLEDIKNHPFFKEVD 264 (333)
T ss_pred ----ccCCCCCc------cccccCHHHHHHHHHHhhChhhhcCCHHHHHhCcccCCCC
Confidence 00111000 0024689999999999999999999999999999999864
No 71
>cd05596 STKc_ROCK Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase. Serine/Threonine Kinases (STKs), Rho-associated coiled-coil containing protein kinase (ROCK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK is also referred to as Rho-associated kinase or simply as Rho kinase. It contains an N-terminal extension, a catalytic kinase domain, and a long C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain. It is activated via in
Probab=100.00 E-value=2.1e-45 Score=373.67 Aligned_cols=256 Identities=27% Similarity=0.457 Sum_probs=208.8
Q ss_pred cccceeEeeeeccCCceEEEEEEEcCCCCEEEEEEeccch-------hhHHHHHHHHHHcCCCCccccceeeeeccCCCc
Q 011138 135 QTISYMAERVVGTGSFGVVFQAKCLETGDSVAIKKVLQDK-------RYKNRELQIMRLLNHPNVVSLKHCFFSTTEKDE 207 (492)
Q Consensus 135 ~~~~y~~~~~lG~G~fg~Vy~~~~~~~g~~vAiK~~~~~~-------~~~~~E~~il~~l~h~nIv~l~~~~~~~~~~~~ 207 (492)
...+|.+.+.||+|+||.||+|++..+++.||+|++.+.. ....+|+.+++.++||||+++++++ .+.
T Consensus 41 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~il~~~~h~~iv~~~~~~-----~~~ 115 (370)
T cd05596 41 KAEDFDVIKVIGRGAFGEVQLVRHKSSKQVYAMKLLSKFEMIKRSDSAFFWEERDIMAHANSEWIVQLHYAF-----QDD 115 (370)
T ss_pred CHHHcEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhhHHHHHHHHHHHHhCCCCCcceEEEEE-----ecC
Confidence 4457999999999999999999999999999999985421 2345799999999999999999888 555
Q ss_pred eEEEEEeeechhh-HHHHhhhhhhcCCCcCHHHHHHHHHHHHHHHHHHHhhCCcccCCCCCCceEEcCCCCcEEEeeecC
Q 011138 208 LYLNLVLEYISET-VYRVSKHYTRMNQHVPILYVQLYTYQICRALNYLHHVVGVCHRDIKPQNLLVNPHTHQLKICDFGS 286 (492)
Q Consensus 208 ~~~~lV~E~~~~~-l~~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~yLH~~~givHrDlKp~NILl~~~~~~vkL~DFG~ 286 (492)
.++|+||||++++ +..++. ...+++..+..++.||+.||.|||+ +||+||||||+|||++.++ .+||+|||+
T Consensus 116 ~~~~lv~Ey~~gg~L~~~l~-----~~~l~~~~~~~~~~qi~~aL~~LH~-~~ivHrDLkp~NILl~~~~-~~kL~DfG~ 188 (370)
T cd05596 116 KYLYMVMEYMPGGDLVNLMS-----NYDIPEKWARFYTAEVVLALDAIHS-MGFIHRDVKPDNMLLDKSG-HLKLADFGT 188 (370)
T ss_pred CEEEEEEcCCCCCcHHHHHH-----hcCCCHHHHHHHHHHHHHHHHHHHH-CCeeccCCCHHHEEEcCCC-CEEEEeccc
Confidence 6799999999865 443332 2357888999999999999999997 9999999999999999888 799999999
Q ss_pred ccccCCCC--CCccceeccCccCchhhcCC---CCCCcchhhHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCCH
Q 011138 287 AKMLVPGE--PNISYICSRYYRAPELIFGA---TEYTTAIDMWSIGCVLAELLLGQPLFPGESGVDQLVEIIKILGTPTR 361 (492)
Q Consensus 287 a~~~~~~~--~~~~~~gt~~y~aPE~~~~~---~~~~~~~DvwSlGvil~ell~G~~pf~~~~~~~~~~~i~~~~g~p~~ 361 (492)
+....... .....+||+.|+|||++.+. ..++.++|||||||++|||++|.+||.+.+....+.++....
T Consensus 189 ~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~DiwSlGvilyelltG~~Pf~~~~~~~~~~~i~~~~----- 263 (370)
T cd05596 189 CMKMDANGMVRCDTAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLYEMLVGDTPFYADSLVGTYSKIMDHK----- 263 (370)
T ss_pred eeeccCCCcccCCCCCCCcCeECHHHhccCCCCCCCCCceeeeehhHHHHHHHhCCCCcCCCCHHHHHHHHHcCC-----
Confidence 97654322 22356799999999998653 247899999999999999999999999888766666654311
Q ss_pred HHHhhcCCCCcccCCCcccCCCcccccCCCCChhHhhhhccccccCCCC--cCCHHHhhCCCCCCCCC
Q 011138 362 EEIKCMNPNYTEFKFPQIKAHPWHKIFHKRMPPEALDLVSRLLQYSPSL--RCTALEACAHPFFDDLR 427 (492)
Q Consensus 362 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~Li~~~L~~dP~~--R~t~~e~l~Hp~f~~~~ 427 (492)
..+.+|. ...++.++++||++||+.+|.+ |++++++++||||++..
T Consensus 264 ----------~~~~~~~----------~~~~s~~~~~li~~~L~~~p~r~~R~s~~ell~h~~~~~~~ 311 (370)
T cd05596 264 ----------NSLTFPD----------DIEISKQAKDLICAFLTDREVRLGRNGVDEIKSHPFFKNDQ 311 (370)
T ss_pred ----------CcCCCCC----------cCCCCHHHHHHHHHHccChhhccCCCCHHHHhcCcccCCCC
Confidence 0111221 1247899999999999999998 99999999999998743
No 72
>cd05625 STKc_LATS1 Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor 1. Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, LATS1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS functions as a tumor suppressor and is implicated in cell cycle regulation. Inactivation of LATS1 in mice results in the development of various tumors, including sarcomas and ovarian cancer. Promoter methylation, loss of heterozygosity, and missense mutations targeting the LATS1 gene have also been found in human sarcomas and ovarian cancers. In addition, decreased expression of LATS1 is associated with an aggressive phenotype an
Probab=100.00 E-value=1.4e-45 Score=376.72 Aligned_cols=252 Identities=29% Similarity=0.479 Sum_probs=203.1
Q ss_pred ceeEeeeeccCCceEEEEEEEcCCCCEEEEEEeccch-------hhHHHHHHHHHHcCCCCccccceeeeeccCCCceEE
Q 011138 138 SYMAERVVGTGSFGVVFQAKCLETGDSVAIKKVLQDK-------RYKNRELQIMRLLNHPNVVSLKHCFFSTTEKDELYL 210 (492)
Q Consensus 138 ~y~~~~~lG~G~fg~Vy~~~~~~~g~~vAiK~~~~~~-------~~~~~E~~il~~l~h~nIv~l~~~~~~~~~~~~~~~ 210 (492)
.|.+.+.||+|+||.||+|++..+++.||||++.+.. ....+|+.+++.++|||||+++++| .+..++
T Consensus 2 ~f~~~~~LG~G~~g~Vy~a~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~E~~il~~~~h~~iv~~~~~~-----~~~~~~ 76 (382)
T cd05625 2 MFVKIKTLGIGAFGEVCLARKVDTKALYAMKTLRKKDVLLRNQVAHVKAERDILAEADNEWVVRLYYSF-----QDKDNL 76 (382)
T ss_pred CcEEEEEEEeCCCEEEEEEEECCCCCEEEEEEEeHHHhhhHHHHHHHHHHHHHHHhCCCCcCCeEEEEE-----EeCCEE
Confidence 4899999999999999999999999999999986432 2345799999999999999999998 444569
Q ss_pred EEEeeechhh-HHHHhhhhhhcCCCcCHHHHHHHHHHHHHHHHHHHhhCCcccCCCCCCceEEcCCCCcEEEeeecCccc
Q 011138 211 NLVLEYISET-VYRVSKHYTRMNQHVPILYVQLYTYQICRALNYLHHVVGVCHRDIKPQNLLVNPHTHQLKICDFGSAKM 289 (492)
Q Consensus 211 ~lV~E~~~~~-l~~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~yLH~~~givHrDlKp~NILl~~~~~~vkL~DFG~a~~ 289 (492)
|+|||||+++ +...+.. ...+++..++.++.||+.||.|||+ +||+||||||+|||++.++ .+||+|||++..
T Consensus 77 ~lv~E~~~gg~L~~~l~~----~~~~~e~~~~~~~~qi~~al~~lH~-~~ivHrDlKp~NILl~~~g-~~kL~DFGla~~ 150 (382)
T cd05625 77 YFVMDYIPGGDMMSLLIR----MGIFPEDLARFYIAELTCAVESVHK-MGFIHRDIKPDNILIDRDG-HIKLTDFGLCTG 150 (382)
T ss_pred EEEEeCCCCCcHHHHHHh----cCCCCHHHHHHHHHHHHHHHHHHHh-CCeecCCCCHHHEEECCCC-CEEEeECCCCcc
Confidence 9999999865 4443322 3468899999999999999999997 9999999999999999888 799999999753
Q ss_pred cCCC------------------------------------------------CCCccceeccCccCchhhcCCCCCCcch
Q 011138 290 LVPG------------------------------------------------EPNISYICSRYYRAPELIFGATEYTTAI 321 (492)
Q Consensus 290 ~~~~------------------------------------------------~~~~~~~gt~~y~aPE~~~~~~~~~~~~ 321 (492)
.... ......+||+.|+|||++.+. .|+.++
T Consensus 151 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~-~~~~~~ 229 (382)
T cd05625 151 FRWTHDSKYYQSGDHVRQDSMDFSNEWGDPANCRCGDRLKPLERRAARQHQRCLAHSLVGTPNYIAPEVLLRT-GYTQLC 229 (382)
T ss_pred ccccccccccccccccccccccccccccccccccccccccchhhhhccccccccccccccCcccCCHHHhcCC-CCCCee
Confidence 2100 001235799999999999755 489999
Q ss_pred hhHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCCHHHHhhcCCCCcccCCCcccCCCcccccCCCCChhHhhhhc
Q 011138 322 DMWSIGCVLAELLLGQPLFPGESGVDQLVEIIKILGTPTREEIKCMNPNYTEFKFPQIKAHPWHKIFHKRMPPEALDLVS 401 (492)
Q Consensus 322 DvwSlGvil~ell~G~~pf~~~~~~~~~~~i~~~~g~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~Li~ 401 (492)
|||||||++|||++|++||.+.+..+....+.... ....+|. ...+++++++||.
T Consensus 230 DiwSlGvil~elltG~~Pf~~~~~~~~~~~i~~~~---------------~~~~~p~----------~~~~s~~~~~li~ 284 (382)
T cd05625 230 DWWSVGVILYEMLVGQPPFLAQTPLETQMKVINWQ---------------TSLHIPP----------QAKLSPEASDLII 284 (382)
T ss_pred eEEechHHHHHHHhCCCCCCCCCHHHHHHHHHccC---------------CCcCCCC----------cccCCHHHHHHHH
Confidence 99999999999999999999887766655554310 0111111 1347899999999
Q ss_pred cccccCCCCcCC---HHHhhCCCCCCCCC
Q 011138 402 RLLQYSPSLRCT---ALEACAHPFFDDLR 427 (492)
Q Consensus 402 ~~L~~dP~~R~t---~~e~l~Hp~f~~~~ 427 (492)
+|+ .||.+|++ +.++++||||+.+.
T Consensus 285 ~l~-~~p~~R~~~~~~~ei~~hp~f~~~~ 312 (382)
T cd05625 285 KLC-RGPEDRLGKNGADEIKAHPFFKTID 312 (382)
T ss_pred HHc-cCHhHcCCCCCHHHHhcCCCcCCcC
Confidence 987 59999997 99999999998764
No 73
>cd05626 STKc_LATS2 Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor 2. Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, LATS2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS functions as a tumor suppressor and is implicated in cell cycle regulation. LATS2 is an essential mitotic regulator responsible for coordinating accurate cytokinesis completion and governing the stabilization of other mitotic regulators. It is also critical in the maintenance of proper chromosome number, genomic stability, mitotic fidelity, and the integrity of centrosome duplication. Downregulation of LATS2 is associated with po
Probab=100.00 E-value=2.5e-45 Score=374.75 Aligned_cols=254 Identities=28% Similarity=0.456 Sum_probs=201.8
Q ss_pred ceeEeeeeccCCceEEEEEEEcCCCCEEEEEEeccch-------hhHHHHHHHHHHcCCCCccccceeeeeccCCCceEE
Q 011138 138 SYMAERVVGTGSFGVVFQAKCLETGDSVAIKKVLQDK-------RYKNRELQIMRLLNHPNVVSLKHCFFSTTEKDELYL 210 (492)
Q Consensus 138 ~y~~~~~lG~G~fg~Vy~~~~~~~g~~vAiK~~~~~~-------~~~~~E~~il~~l~h~nIv~l~~~~~~~~~~~~~~~ 210 (492)
.|.+.+.||+|+||+||+|++..+++.||||++.... ....+|+.+++.++||||+++++++ .+..++
T Consensus 2 ~f~~~~~LG~G~~g~Vy~~~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~E~~il~~l~h~~iv~l~~~~-----~~~~~~ 76 (381)
T cd05626 2 MFVKIKTLGIGAFGEVCLACKVDTHALYAMKTLRKKDVLNRNQVAHVKAERDILAEADNEWVVKLYYSF-----QDKDNL 76 (381)
T ss_pred CceEEEEEeecCCEEEEEEEECCCCCEEEEEEEEHHHhhhhHHHHHHHHHHHHHHhcCCCCeeeeEEEE-----ecCCEE
Confidence 4889999999999999999999999999999985432 2345799999999999999999998 445579
Q ss_pred EEEeeechhh-HHHHhhhhhhcCCCcCHHHHHHHHHHHHHHHHHHHhhCCcccCCCCCCceEEcCCCCcEEEeeecCccc
Q 011138 211 NLVLEYISET-VYRVSKHYTRMNQHVPILYVQLYTYQICRALNYLHHVVGVCHRDIKPQNLLVNPHTHQLKICDFGSAKM 289 (492)
Q Consensus 211 ~lV~E~~~~~-l~~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~yLH~~~givHrDlKp~NILl~~~~~~vkL~DFG~a~~ 289 (492)
|+||||++++ +...+.. ...+++..++.++.||+.||.|||+ +||+||||||+||||+.++ .+||+|||+++.
T Consensus 77 ~lv~E~~~gg~L~~~l~~----~~~~~e~~~~~~~~qi~~aL~~LH~-~givHrDlKp~Nili~~~~-~~kL~DFGl~~~ 150 (381)
T cd05626 77 YFVMDYIPGGDMMSLLIR----MEVFPEVLARFYIAELTLAIESVHK-MGFIHRDIKPDNILIDLDG-HIKLTDFGLCTG 150 (381)
T ss_pred EEEEecCCCCcHHHHHHh----cCCCCHHHHHHHHHHHHHHHHHHHh-CCeeecCCcHHHEEECCCC-CEEEeeCcCCcc
Confidence 9999999865 4443322 3568899999999999999999997 9999999999999999887 799999999753
Q ss_pred cCCCC------------------------------------------------CCccceeccCccCchhhcCCCCCCcch
Q 011138 290 LVPGE------------------------------------------------PNISYICSRYYRAPELIFGATEYTTAI 321 (492)
Q Consensus 290 ~~~~~------------------------------------------------~~~~~~gt~~y~aPE~~~~~~~~~~~~ 321 (492)
..... .....+||+.|+|||++.+. .++.++
T Consensus 151 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~-~~~~~~ 229 (381)
T cd05626 151 FRWTHNSKYYQKGSHIRQDSMEPSDLWDDVSNCRCGDRLKTLEQRATKQHQRCLAHSLVGTPNYIAPEVLLRK-GYTQLC 229 (381)
T ss_pred cccccccccccccccccccccCcccccccccccccccccchhhccccccccccccccccCCccccCHHHHcCC-CCCCcc
Confidence 21000 01235799999999999654 489999
Q ss_pred hhHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCCHHHHhhcCCCCcccCCCcccCCCcccccCCCCChhHhhhhc
Q 011138 322 DMWSIGCVLAELLLGQPLFPGESGVDQLVEIIKILGTPTREEIKCMNPNYTEFKFPQIKAHPWHKIFHKRMPPEALDLVS 401 (492)
Q Consensus 322 DvwSlGvil~ell~G~~pf~~~~~~~~~~~i~~~~g~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~Li~ 401 (492)
|||||||++|||++|.+||...+..+....+.... ....+|. ...+++++++||.
T Consensus 230 DiwSlG~il~elltG~~Pf~~~~~~~~~~~i~~~~---------------~~~~~~~----------~~~~s~~~~dli~ 284 (381)
T cd05626 230 DWWSVGVILFEMLVGQPPFLAPTPTETQLKVINWE---------------NTLHIPP----------QVKLSPEAVDLIT 284 (381)
T ss_pred ceeehhhHHHHHHhCCCCCcCCCHHHHHHHHHccc---------------cccCCCC----------CCCCCHHHHHHHH
Confidence 99999999999999999999877665555543210 0111111 1247899999999
Q ss_pred cccc--cCCCCcCCHHHhhCCCCCCCCCC
Q 011138 402 RLLQ--YSPSLRCTALEACAHPFFDDLRD 428 (492)
Q Consensus 402 ~~L~--~dP~~R~t~~e~l~Hp~f~~~~~ 428 (492)
+||. .+|..|+++.++++||||+++..
T Consensus 285 ~ll~~~~~~~~R~~~~~~l~hp~f~~~~~ 313 (381)
T cd05626 285 KLCCSAEERLGRNGADDIKAHPFFSEVDF 313 (381)
T ss_pred HHccCcccccCCCCHHHHhcCcccCCCCh
Confidence 9654 45556999999999999997643
No 74
>cd05573 STKc_ROCK_NDR_like Catalytic domain of ROCK- and NDR kinase-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Rho-associated coiled-coil containing protein kinase (ROCK) and Nuclear Dbf2-Related (NDR)-like kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK- and NDR-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily include ROCK and ROCK-like proteins such as DMPK, MRCK, and CRIK, as well as NDR and NDR-like proteins such as LATS, CBK1 and Sid2p. ROCK and CRIK are effectors of the small GTPase Rho, while MRCK is an effector of the small GTPase Cdc42. NDR and NDR-like kinases contain an N-terminal regulatory (NTR) domain and an insert within the
Probab=100.00 E-value=1.6e-45 Score=371.78 Aligned_cols=253 Identities=31% Similarity=0.515 Sum_probs=208.3
Q ss_pred ceeEeeeeccCCceEEEEEEEcCCCCEEEEEEeccc-------hhhHHHHHHHHHHcCCCCccccceeeeeccCCCceEE
Q 011138 138 SYMAERVVGTGSFGVVFQAKCLETGDSVAIKKVLQD-------KRYKNRELQIMRLLNHPNVVSLKHCFFSTTEKDELYL 210 (492)
Q Consensus 138 ~y~~~~~lG~G~fg~Vy~~~~~~~g~~vAiK~~~~~-------~~~~~~E~~il~~l~h~nIv~l~~~~~~~~~~~~~~~ 210 (492)
+|.+.+.||+|+||.||+|.+..+|+.||||++... .....+|+.+++.++||||+++++++ .+..++
T Consensus 2 ~y~~~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~-----~~~~~~ 76 (350)
T cd05573 2 DFEVIKVIGRGAFGEVWLVRDKDTGQVYAMKVLRKSDMIKRNQIAHVRAERDILADADSPWIVKLYYSF-----QDEEHL 76 (350)
T ss_pred CceEEEEEEeCCcEEEEEEEECCCCCEEEEEEEEHHHHhhccHHHHHHHHHHHHHhcCCCCccchhhhe-----ecCCeE
Confidence 599999999999999999999999999999998543 23345799999999999999999988 455579
Q ss_pred EEEeeechhh-HHHHhhhhhhcCCCcCHHHHHHHHHHHHHHHHHHHhhCCcccCCCCCCceEEcCCCCcEEEeeecCccc
Q 011138 211 NLVLEYISET-VYRVSKHYTRMNQHVPILYVQLYTYQICRALNYLHHVVGVCHRDIKPQNLLVNPHTHQLKICDFGSAKM 289 (492)
Q Consensus 211 ~lV~E~~~~~-l~~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~yLH~~~givHrDlKp~NILl~~~~~~vkL~DFG~a~~ 289 (492)
|+||||+.++ +...+.. ...+++..++.++.||+.||.|||+ +||+||||||+||||+.++ .+||+|||++..
T Consensus 77 ~lv~e~~~~~~L~~~l~~----~~~l~~~~~~~i~~qi~~aL~~LH~-~giiH~Dlkp~NIll~~~~-~~kL~Dfg~~~~ 150 (350)
T cd05573 77 YLVMEYMPGGDLMNLLIR----KDVFPEETARFYIAELVLALDSVHK-LGFIHRDIKPDNILIDADG-HIKLADFGLCKK 150 (350)
T ss_pred EEEEcCCCCCCHHHHHHH----cCCCCHHHHHHHHHHHHHHHHHHHH-CCeeccCCCHHHeEECCCC-CEEeecCCCCcc
Confidence 9999999764 4443332 2578999999999999999999997 9999999999999999888 799999999976
Q ss_pred cCCCC------------------------------CCccceeccCccCchhhcCCCCCCcchhhHHHHHHHHHHHhCCCC
Q 011138 290 LVPGE------------------------------PNISYICSRYYRAPELIFGATEYTTAIDMWSIGCVLAELLLGQPL 339 (492)
Q Consensus 290 ~~~~~------------------------------~~~~~~gt~~y~aPE~~~~~~~~~~~~DvwSlGvil~ell~G~~p 339 (492)
..... ......||+.|+|||++.+. .++.++|||||||++|+|++|+.|
T Consensus 151 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~~DiwSlG~il~ell~g~~P 229 (350)
T cd05573 151 MNKAKDREYYLNDSHNLLFRDNVLVRRRDHKQRRVRANSTVGTPDYIAPEVLRGT-PYGLECDWWSLGVILYEMLYGFPP 229 (350)
T ss_pred CcccCcccccccccccccccccccccccccccccccccccccCccccCHHHHcCC-CCCCceeeEecchhhhhhccCCCC
Confidence 54332 22345789999999999765 589999999999999999999999
Q ss_pred CCCCChHHHHHHHHHHhCCCCHHHHhhcCCCCcccCCCcccCCCcccccCCCCChhHhhhhccccccCCCCcCC-HHHhh
Q 011138 340 FPGESGVDQLVEIIKILGTPTREEIKCMNPNYTEFKFPQIKAHPWHKIFHKRMPPEALDLVSRLLQYSPSLRCT-ALEAC 418 (492)
Q Consensus 340 f~~~~~~~~~~~i~~~~g~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~Li~~~L~~dP~~R~t-~~e~l 418 (492)
|.+.+..+....+.... ....+|. ...+++++.+||.+||. ||.+|++ +.+++
T Consensus 230 f~~~~~~~~~~~i~~~~---------------~~~~~p~----------~~~~~~~~~~li~~ll~-dp~~R~~s~~~ll 283 (350)
T cd05573 230 FYSDTLQETYNKIINWK---------------ESLRFPP----------DPPVSPEAIDLICRLLC-DPEDRLGSFEEIK 283 (350)
T ss_pred CCCCCHHHHHHHHhccC---------------CcccCCC----------CCCCCHHHHHHHHHHcc-ChhhcCCCHHHHh
Confidence 99887666555554311 0111111 12368999999999997 9999999 99999
Q ss_pred CCCCCCCCCC
Q 011138 419 AHPFFDDLRD 428 (492)
Q Consensus 419 ~Hp~f~~~~~ 428 (492)
+||||+++..
T Consensus 284 ~hp~~~~~~~ 293 (350)
T cd05573 284 SHPFFKGIDW 293 (350)
T ss_pred cCCCcCCCCH
Confidence 9999998654
No 75
>cd07858 STKc_TEY_MAPK_plant Catalytic domain of the Serine/Threonine Kinases, TEY Mitogen-Activated Protein Kinases from Plants. Serine/Threonine Kinases (STKs), Plant TEY Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TEY MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. In plants, MAPKs are associated with physiological, developmental, hormonal, and stress responses. Some plants show numerous gene duplications of MAPKs. Arabidopsis thaliana harbors at least 20 MAPKs, named AtMPK1-20. There are two subtypes of plant MAPKs based on the conserved phosphorylation motif present in the activati
Probab=100.00 E-value=5e-45 Score=366.44 Aligned_cols=318 Identities=35% Similarity=0.618 Sum_probs=245.0
Q ss_pred cceeEeeeeccCCceEEEEEEEcCCCCEEEEEEeccc------hhhHHHHHHHHHHcCCCCccccceeeeeccCCCceEE
Q 011138 137 ISYMAERVVGTGSFGVVFQAKCLETGDSVAIKKVLQD------KRYKNRELQIMRLLNHPNVVSLKHCFFSTTEKDELYL 210 (492)
Q Consensus 137 ~~y~~~~~lG~G~fg~Vy~~~~~~~g~~vAiK~~~~~------~~~~~~E~~il~~l~h~nIv~l~~~~~~~~~~~~~~~ 210 (492)
.+|.+.+.||+|+||+||+|.+..+|+.||||.+... .....+|+.+++.++|+||+++++++..........+
T Consensus 5 ~~y~~~~~lg~G~~~~vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~ni~~~~~~~~~~~~~~~~~~ 84 (337)
T cd07858 5 TKYVPIKPIGRGAYGIVCSAKNSETNEKVAIKKIANAFDNRIDAKRTLREIKLLRHLDHENVIAIKDIMPPPHREAFNDV 84 (337)
T ss_pred cceeEEEEeccCCCeEEEEEEecCCCCeEEEEEecccccccchhHHHHHHHHHHHhcCCCCccchHHheecccccccCcE
Confidence 3599999999999999999999999999999987532 2234479999999999999999998765443334568
Q ss_pred EEEeeechhhHHHHhhhhhhcCCCcCHHHHHHHHHHHHHHHHHHHhhCCcccCCCCCCceEEcCCCCcEEEeeecCcccc
Q 011138 211 NLVLEYISETVYRVSKHYTRMNQHVPILYVQLYTYQICRALNYLHHVVGVCHRDIKPQNLLVNPHTHQLKICDFGSAKML 290 (492)
Q Consensus 211 ~lV~E~~~~~l~~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~yLH~~~givHrDlKp~NILl~~~~~~vkL~DFG~a~~~ 290 (492)
|+||||+++++...+.. ...+++..+..++.||+.||.|||+ +|++||||||+||+++.++ .+||+|||++...
T Consensus 85 ~lv~e~~~~~L~~~~~~----~~~l~~~~~~~i~~qi~~aL~~LH~-~~i~H~dlkp~Nil~~~~~-~~kL~Dfg~~~~~ 158 (337)
T cd07858 85 YIVYELMDTDLHQIIRS----SQTLSDDHCQYFLYQLLRGLKYIHS-ANVLHRDLKPSNLLLNANC-DLKICDFGLARTT 158 (337)
T ss_pred EEEEeCCCCCHHHHHhc----CCCCCHHHHHHHHHHHHHHHHHHHh-CCEecCCCCHHHEEEcCCC-CEEECcCcccccc
Confidence 99999999877665432 3568999999999999999999997 9999999999999999887 7999999999865
Q ss_pred CCC-CCCccceeccCccCchhhcCCCCCCcchhhHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCCHHHHhhcCC
Q 011138 291 VPG-EPNISYICSRYYRAPELIFGATEYTTAIDMWSIGCVLAELLLGQPLFPGESGVDQLVEIIKILGTPTREEIKCMNP 369 (492)
Q Consensus 291 ~~~-~~~~~~~gt~~y~aPE~~~~~~~~~~~~DvwSlGvil~ell~G~~pf~~~~~~~~~~~i~~~~g~p~~~~~~~~~~ 369 (492)
... .......++..|+|||.+.+...++.++|||||||++|+|++|++||.+.+....+..+...+|.+....+.....
T Consensus 159 ~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 238 (337)
T cd07858 159 SEKGDFMTEYVVTRWYRAPELLLNCSEYTTAIDVWSVGCIFAELLGRKPLFPGKDYVHQLKLITELLGSPSEEDLGFIRN 238 (337)
T ss_pred CCCcccccccccccCccChHHHhcCCCCCCcccHHHHHHHHHHHHcCCCCCCCCChHHHHHHHHHHhCCCChHHhhhcCc
Confidence 433 2233457899999999987655589999999999999999999999999888888888888888887766533211
Q ss_pred CCcc-c--CCCcccCCCcccccCCCCChhHhhhhccccccCCCCcCCHHHhhCCCCCCCCCCCCCCCCCCCCCCCCCCCC
Q 011138 370 NYTE-F--KFPQIKAHPWHKIFHKRMPPEALDLVSRLLQYSPSLRCTALEACAHPFFDDLRDPNTCLPNGRPLPTLFNFT 446 (492)
Q Consensus 370 ~~~~-~--~~~~~~~~~~~~~~~~~~s~~~~~Li~~~L~~dP~~R~t~~e~l~Hp~f~~~~~~~~~~~~~~~~~~~~~~~ 446 (492)
.... + ..+......+. ...+.+++++.+||++||+.||++|||+.++++||||..+.++...... ..+ +.|+
T Consensus 239 ~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~li~~~l~~~P~~Rps~~ell~h~~~~~~~~~~~~~~~--~~~--~~~~ 313 (337)
T cd07858 239 EKARRYIRSLPYTPRQSFA-RLFPHANPLAIDLLEKMLVFDPSKRITVEEALAHPYLASLHDPSDEPVC--QTP--FSFD 313 (337)
T ss_pred hhhhHHHHhcCcccccCHH-HHcccCCHHHHHHHHHHhcCChhhccCHHHHHcCcchhhhcCcccCccC--CCc--cchh
Confidence 1000 0 01111111111 1234689999999999999999999999999999999988765432221 111 1222
Q ss_pred cccccccccccccccccccCccchhHHHhcCCHHHHhhcccccc
Q 011138 447 AQGKLILCFSYFGFSSYFLPHANCLAELAGASNELRQRLIPEHA 490 (492)
Q Consensus 447 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 490 (492)
.|.++...+..+++|..|+
T Consensus 314 -------------------------~~~~~~~~~~~~~~~~~~~ 332 (337)
T cd07858 314 -------------------------FEEDALTEEDIKELIYNEM 332 (337)
T ss_pred -------------------------hhhhhcCHHHHHHHHHHHH
Confidence 1555688888888887775
No 76
>cd05589 STKc_PKN Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase N. Serine/Threonine Kinases (STKs), Protein Kinase N (PKN) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKN subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKN has a C-terminal catalytic domain that is highly homologous to PKCs. Its unique N-terminal regulatory region contains antiparallel coiled-coil (ACC) domains. In mammals, there are three PKN isoforms from different genes (designated PKN-alpha, beta, and gamma), which show different enzymatic properties, tissue distribution, and varied functions. PKN can be activated by the small GTPase Rho, and by fatty acids such as arachidonic and linoleic acids. It is involved
Probab=100.00 E-value=3e-45 Score=366.03 Aligned_cols=248 Identities=29% Similarity=0.497 Sum_probs=202.1
Q ss_pred eeEeeeeccCCceEEEEEEEcCCCCEEEEEEeccch-------hhHHHHHHHH---HHcCCCCccccceeeeeccCCCce
Q 011138 139 YMAERVVGTGSFGVVFQAKCLETGDSVAIKKVLQDK-------RYKNRELQIM---RLLNHPNVVSLKHCFFSTTEKDEL 208 (492)
Q Consensus 139 y~~~~~lG~G~fg~Vy~~~~~~~g~~vAiK~~~~~~-------~~~~~E~~il---~~l~h~nIv~l~~~~~~~~~~~~~ 208 (492)
|.+.+.||+|+||.||+|.+..+|+.||||++.... ....+|+.++ +.++||||+++++++ .+..
T Consensus 1 y~i~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~l~~e~~~~~~~~~l~hp~i~~~~~~~-----~~~~ 75 (324)
T cd05589 1 FRCLAVLGRGHFGKVLLAEYKKTGELYAIKALKKGDIIARDEVESLMCEKRIFETANSERHPFLVNLFACF-----QTED 75 (324)
T ss_pred CeEEEEEeecCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhccccCCCChhceeeEE-----EcCC
Confidence 678899999999999999999999999999986432 2233455554 466799999999998 4445
Q ss_pred EEEEEeeechhhHHHHhhhhhhcCCCcCHHHHHHHHHHHHHHHHHHHhhCCcccCCCCCCceEEcCCCCcEEEeeecCcc
Q 011138 209 YLNLVLEYISETVYRVSKHYTRMNQHVPILYVQLYTYQICRALNYLHHVVGVCHRDIKPQNLLVNPHTHQLKICDFGSAK 288 (492)
Q Consensus 209 ~~~lV~E~~~~~l~~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~yLH~~~givHrDlKp~NILl~~~~~~vkL~DFG~a~ 288 (492)
.+|+||||+.++.+..... ...+++..++.++.||+.||.|||+ +||+||||||+|||++.++ .+||+|||+++
T Consensus 76 ~~~lv~E~~~~~~L~~~~~----~~~l~~~~~~~~~~qi~~al~~lH~-~~ivHrdlkp~Nill~~~~-~~kL~Dfg~~~ 149 (324)
T cd05589 76 HVCFVMEYAAGGDLMMHIH----TDVFSEPRAVFYAACVVLGLQYLHE-NKIVYRDLKLDNLLLDTEG-FVKIADFGLCK 149 (324)
T ss_pred EEEEEEcCCCCCcHHHHhh----cCCCCHHHHHHHHHHHHHHHHHHHh-CCeEecCCCHHHeEECCCC-cEEeCcccCCc
Confidence 6899999999764432221 3468999999999999999999997 9999999999999999888 79999999987
Q ss_pred ccCC-CCCCccceeccCccCchhhcCCCCCCcchhhHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCCHHHHhhc
Q 011138 289 MLVP-GEPNISYICSRYYRAPELIFGATEYTTAIDMWSIGCVLAELLLGQPLFPGESGVDQLVEIIKILGTPTREEIKCM 367 (492)
Q Consensus 289 ~~~~-~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DvwSlGvil~ell~G~~pf~~~~~~~~~~~i~~~~g~p~~~~~~~~ 367 (492)
.... .......+||+.|+|||++.+. .++.++|||||||++|+|++|..||.+.+..+.+..+...
T Consensus 150 ~~~~~~~~~~~~~g~~~y~aPE~~~~~-~~~~~~DiwslG~il~el~~G~~pf~~~~~~~~~~~i~~~------------ 216 (324)
T cd05589 150 EGMGFGDRTSTFCGTPEFLAPEVLTET-SYTRAVDWWGLGVLIYEMLVGESPFPGDDEEEVFDSIVND------------ 216 (324)
T ss_pred cCCCCCCcccccccCccccCHhHhcCC-CCCcccchhhHHHHHHHHHhCCCCCCCCCHHHHHHHHHhC------------
Confidence 5322 2233456799999999999654 4899999999999999999999999988776665555431
Q ss_pred CCCCcccCCCcccCCCcccccCCCCChhHhhhhccccccCCCCcC-----CHHHhhCCCCCCCCC
Q 011138 368 NPNYTEFKFPQIKAHPWHKIFHKRMPPEALDLVSRLLQYSPSLRC-----TALEACAHPFFDDLR 427 (492)
Q Consensus 368 ~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~Li~~~L~~dP~~R~-----t~~e~l~Hp~f~~~~ 427 (492)
... ++..+++++.+||.+||+.||.+|| ++.++++||||+++.
T Consensus 217 -----~~~------------~p~~~~~~~~~li~~~L~~dP~~R~~~~~~~~~~l~~~~~f~~~~ 264 (324)
T cd05589 217 -----EVR------------YPRFLSREAISIMRRLLRRNPERRLGSGEKDAEDVKKQPFFRDIN 264 (324)
T ss_pred -----CCC------------CCCCCCHHHHHHHHHHhhcCHhHcCCCCCCCHHHHhhCCCcCCCC
Confidence 111 2235789999999999999999999 799999999999864
No 77
>cd05590 STKc_nPKC_eta Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C eta. Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), eta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-eta is predominantly expressed in squamous epithelia, where it plays a crucial role in the signal
Probab=100.00 E-value=3.4e-45 Score=364.99 Aligned_cols=246 Identities=28% Similarity=0.500 Sum_probs=199.7
Q ss_pred eeeccCCceEEEEEEEcCCCCEEEEEEeccch-------hhHHHHHHHHHHc-CCCCccccceeeeeccCCCceEEEEEe
Q 011138 143 RVVGTGSFGVVFQAKCLETGDSVAIKKVLQDK-------RYKNRELQIMRLL-NHPNVVSLKHCFFSTTEKDELYLNLVL 214 (492)
Q Consensus 143 ~~lG~G~fg~Vy~~~~~~~g~~vAiK~~~~~~-------~~~~~E~~il~~l-~h~nIv~l~~~~~~~~~~~~~~~~lV~ 214 (492)
+.||+|+||.||+|+++.+++.||||++.+.. ....+|..++..+ +||||++++++| .+..++|+||
T Consensus 1 ~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~h~~iv~~~~~~-----~~~~~~~iv~ 75 (320)
T cd05590 1 RVLGKGSFGKVMLARLKESGRLYAVKVLKKDVILQDDDVECTMTEKRILSLARNHPFLTQLYCCF-----QTPDRLFFVM 75 (320)
T ss_pred CeeeeCCCeEEEEEEEcCCCCEEEEEEEEHHHHhhccHHHHHHHHHHHHHhccCCCchhceeeEE-----EcCCEEEEEE
Confidence 36999999999999999999999999986432 2234677888766 699999999998 4445689999
Q ss_pred eechhhHHHHhhhhhhcCCCcCHHHHHHHHHHHHHHHHHHHhhCCcccCCCCCCceEEcCCCCcEEEeeecCccccC-CC
Q 011138 215 EYISETVYRVSKHYTRMNQHVPILYVQLYTYQICRALNYLHHVVGVCHRDIKPQNLLVNPHTHQLKICDFGSAKMLV-PG 293 (492)
Q Consensus 215 E~~~~~l~~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~yLH~~~givHrDlKp~NILl~~~~~~vkL~DFG~a~~~~-~~ 293 (492)
||++++.+... ......+++..+..++.||+.||.|||+ +||+||||||+|||++.++ .+||+|||+++... ..
T Consensus 76 Ey~~~g~L~~~---i~~~~~l~~~~~~~~~~ql~~~L~~lH~-~~ivH~dlkp~NIli~~~~-~~kL~DfG~~~~~~~~~ 150 (320)
T cd05590 76 EFVNGGDLMFH---IQKSRRFDEARARFYAAEITSALMFLHD-KGIIYRDLKLDNVLLDHEG-HCKLADFGMCKEGIFNG 150 (320)
T ss_pred cCCCCchHHHH---HHHcCCCCHHHHHHHHHHHHHHHHHHHH-CCeEeCCCCHHHeEECCCC-cEEEeeCCCCeecCcCC
Confidence 99987544321 1224568899999999999999999997 9999999999999999887 79999999987542 22
Q ss_pred CCCccceeccCccCchhhcCCCCCCcchhhHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCCHHHHhhcCCCCcc
Q 011138 294 EPNISYICSRYYRAPELIFGATEYTTAIDMWSIGCVLAELLLGQPLFPGESGVDQLVEIIKILGTPTREEIKCMNPNYTE 373 (492)
Q Consensus 294 ~~~~~~~gt~~y~aPE~~~~~~~~~~~~DvwSlGvil~ell~G~~pf~~~~~~~~~~~i~~~~g~p~~~~~~~~~~~~~~ 373 (492)
.......||+.|+|||++.+. .++.++|||||||++|+|++|+.||.+.+..+.+..+.. ..
T Consensus 151 ~~~~~~~gt~~y~aPE~~~~~-~~~~~~DiwslG~il~el~~g~~Pf~~~~~~~~~~~i~~-----------------~~ 212 (320)
T cd05590 151 KTTSTFCGTPDYIAPEILQEM-LYGPSVDWWAMGVLLYEMLCGHAPFEAENEDDLFEAILN-----------------DE 212 (320)
T ss_pred CcccccccCccccCHHHHcCC-CCCCccchhhhHHHHHHHhhCCCCCCCCCHHHHHHHHhc-----------------CC
Confidence 233456799999999999654 589999999999999999999999998877666555533 11
Q ss_pred cCCCcccCCCcccccCCCCChhHhhhhccccccCCCCcCCH------HHhhCCCCCCCCCC
Q 011138 374 FKFPQIKAHPWHKIFHKRMPPEALDLVSRLLQYSPSLRCTA------LEACAHPFFDDLRD 428 (492)
Q Consensus 374 ~~~~~~~~~~~~~~~~~~~s~~~~~Li~~~L~~dP~~R~t~------~e~l~Hp~f~~~~~ 428 (492)
.. ++..+++++++||++||+.||.+|+++ .++++||||+.+..
T Consensus 213 ~~------------~~~~~~~~~~~li~~~L~~dP~~R~~~~~~~~~~~~~~h~~f~~~~~ 261 (320)
T cd05590 213 VV------------YPTWLSQDAVDILKAFMTKNPTMRLGSLTLGGEEAILRHPFFKELDW 261 (320)
T ss_pred CC------------CCCCCCHHHHHHHHHHcccCHHHCCCCCCCCCHHHHHcCCCcCCCCH
Confidence 11 123478999999999999999999998 89999999998653
No 78
>KOG0192 consensus Tyrosine kinase specific for activated (GTP-bound) p21cdc42Hs [Signal transduction mechanisms]
Probab=100.00 E-value=4.3e-45 Score=363.67 Aligned_cols=246 Identities=31% Similarity=0.453 Sum_probs=198.8
Q ss_pred eeEeeeeccCCceEEEEEEEcCCCCE-EEEEEeccc------hhhHHHHHHHHHHcCCCCccccceeeeeccCCCceEEE
Q 011138 139 YMAERVVGTGSFGVVFQAKCLETGDS-VAIKKVLQD------KRYKNRELQIMRLLNHPNVVSLKHCFFSTTEKDELYLN 211 (492)
Q Consensus 139 y~~~~~lG~G~fg~Vy~~~~~~~g~~-vAiK~~~~~------~~~~~~E~~il~~l~h~nIv~l~~~~~~~~~~~~~~~~ 211 (492)
..+.+.||+|+||+||+|.+. |+. ||||++... ...+.+|+.+|.+++|||||++++++..... .++
T Consensus 43 l~~~~~iG~G~~g~V~~~~~~--g~~~vavK~~~~~~~~~~~~~~f~~E~~il~~l~HpNIV~f~G~~~~~~~----~~~ 116 (362)
T KOG0192|consen 43 LPIEEVLGSGSFGTVYKGKWR--GTDVVAVKIISDPDFDDESRKAFRREASLLSRLRHPNIVQFYGACTSPPG----SLC 116 (362)
T ss_pred hhhhhhcccCCceeEEEEEeC--CceeEEEEEecchhcChHHHHHHHHHHHHHHhCCCCCeeeEEEEEcCCCC----ceE
Confidence 445556999999999999984 556 999998643 2356789999999999999999999843321 588
Q ss_pred EEeeechhhHHHHhhhhhhcCCCcCHHHHHHHHHHHHHHHHHHHhhCC-cccCCCCCCceEEcCCCCcEEEeeecCcccc
Q 011138 212 LVLEYISETVYRVSKHYTRMNQHVPILYVQLYTYQICRALNYLHHVVG-VCHRDIKPQNLLVNPHTHQLKICDFGSAKML 290 (492)
Q Consensus 212 lV~E~~~~~l~~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~yLH~~~g-ivHrDlKp~NILl~~~~~~vkL~DFG~a~~~ 290 (492)
|||||++++.+..+.+.. ....++...+..++.||++||+|||+ ++ ||||||||+|||++.+...+||+|||+++..
T Consensus 117 iVtEy~~~GsL~~~l~~~-~~~~l~~~~~l~~aldiArGm~YLH~-~~~iIHrDLK~~NiLv~~~~~~~KI~DFGlsr~~ 194 (362)
T KOG0192|consen 117 IVTEYMPGGSLSVLLHKK-RKRKLPLKVRLRIALDIARGMEYLHS-EGPIIHRDLKSDNILVDLKGKTLKIADFGLSREK 194 (362)
T ss_pred EEEEeCCCCcHHHHHhhc-ccCCCCHHHHHHHHHHHHHHHHHHhc-CCCeeecccChhhEEEcCCCCEEEECCCccceee
Confidence 999999977665544332 46789999999999999999999997 89 9999999999999988547999999999876
Q ss_pred CCC-CCCccceeccCccCchhhcC-CCCCCcchhhHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCCHHHHhhcC
Q 011138 291 VPG-EPNISYICSRYYRAPELIFG-ATEYTTAIDMWSIGCVLAELLLGQPLFPGESGVDQLVEIIKILGTPTREEIKCMN 368 (492)
Q Consensus 291 ~~~-~~~~~~~gt~~y~aPE~~~~-~~~~~~~~DvwSlGvil~ell~G~~pf~~~~~~~~~~~i~~~~g~p~~~~~~~~~ 368 (492)
... ...+...||+.|||||++.+ ...|+.++||||||++||||+||..||.+....+....+......|.
T Consensus 195 ~~~~~~~~~~~GT~~wMAPEv~~~~~~~~~~K~DvySFgIvlWEl~t~~~Pf~~~~~~~~~~~v~~~~~Rp~-------- 266 (362)
T KOG0192|consen 195 VISKTSMTSVAGTYRWMAPEVLRGEKSPYTEKSDVYSFGIVLWELLTGEIPFEDLAPVQVASAVVVGGLRPP-------- 266 (362)
T ss_pred ccccccccCCCCCccccChhhhcCCCCcCCccchhhhHHHHHHHHHHCCCCCCCCCHHHHHHHHHhcCCCCC--------
Confidence 543 33444799999999999975 35699999999999999999999999999887444444433211111
Q ss_pred CCCcccCCCcccCCCcccccCCCCChhHhhhhccccccCCCCcCCHHHhhC
Q 011138 369 PNYTEFKFPQIKAHPWHKIFHKRMPPEALDLVSRLLQYSPSLRCTALEACA 419 (492)
Q Consensus 369 ~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~Li~~~L~~dP~~R~t~~e~l~ 419 (492)
++...++.+..||.+||..||.+||+..+++.
T Consensus 267 -------------------~p~~~~~~l~~l~~~CW~~dp~~RP~f~ei~~ 298 (362)
T KOG0192|consen 267 -------------------IPKECPPHLSSLMERCWLVDPSRRPSFLEIVS 298 (362)
T ss_pred -------------------CCccCCHHHHHHHHHhCCCCCCcCCCHHHHHH
Confidence 22347889999999999999999999988764
No 79
>cd05601 STKc_CRIK Catalytic domain of the Protein Serine/Threonine Kinase, Citron Rho-interacting kinase. Serine/Threonine Kinases (STKs), Citron Rho-interacting kinase (CRIK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CRIK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CRIK is also called citron kinase. It contains a catalytic domain, a central coiled-coil domain, and a C-terminal region containing a Rho-binding domain (RBD), a zinc finger, and a pleckstrin homology (PH) domain, in addition to other motifs. CRIK, an effector of the small GTPase Rho, plays an important function during cytokinesis and affects its contractile process. CRIK-deficient mice show severe ataxia and epilepsy as a result of abnor
Probab=100.00 E-value=1.7e-45 Score=368.65 Aligned_cols=255 Identities=27% Similarity=0.468 Sum_probs=207.7
Q ss_pred ceeEeeeeccCCceEEEEEEEcCCCCEEEEEEeccch-------hhHHHHHHHHHHcCCCCccccceeeeeccCCCceEE
Q 011138 138 SYMAERVVGTGSFGVVFQAKCLETGDSVAIKKVLQDK-------RYKNRELQIMRLLNHPNVVSLKHCFFSTTEKDELYL 210 (492)
Q Consensus 138 ~y~~~~~lG~G~fg~Vy~~~~~~~g~~vAiK~~~~~~-------~~~~~E~~il~~l~h~nIv~l~~~~~~~~~~~~~~~ 210 (492)
+|.+.+.||+|+||.||+|.+..+|+.||||++.... ....+|+.+++.++|+||+++++++ .+..++
T Consensus 2 ~y~~~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~i~~~~~~~~i~~~~~~~-----~~~~~~ 76 (330)
T cd05601 2 DFDVKSLVGRGHFGEVQVVREKATGDIYAMKVMKKSVLLAQETVSFFEEERDILSISNSPWIPQLQYAF-----QDKDNL 76 (330)
T ss_pred CceEEEEEEeccCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCCCCCcceeeEE-----ecCCeE
Confidence 5999999999999999999999999999999986532 2356799999999999999999888 445568
Q ss_pred EEEeeechhh-HHHHhhhhhhcCCCcCHHHHHHHHHHHHHHHHHHHhhCCcccCCCCCCceEEcCCCCcEEEeeecCccc
Q 011138 211 NLVLEYISET-VYRVSKHYTRMNQHVPILYVQLYTYQICRALNYLHHVVGVCHRDIKPQNLLVNPHTHQLKICDFGSAKM 289 (492)
Q Consensus 211 ~lV~E~~~~~-l~~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~yLH~~~givHrDlKp~NILl~~~~~~vkL~DFG~a~~ 289 (492)
|+||||++++ |...+.. ....+++..++.++.||+.||.|||+ +||+||||||+|||++.++ .+||+|||++..
T Consensus 77 ~lv~e~~~~~~L~~~l~~---~~~~l~~~~~~~~~~qi~~aL~~lH~-~~i~H~Dlkp~NIll~~~~-~~kL~Dfg~a~~ 151 (330)
T cd05601 77 YLVMEYQPGGDLLSLLNR---YEDQFDEDMAQFYLAELVLAIHSVHQ-MGYVHRDIKPENVLIDRTG-HIKLADFGSAAR 151 (330)
T ss_pred EEEECCCCCCCHHHHHHH---hcCCCCHHHHHHHHHHHHHHHHHHHH-CCeEcccCchHheEECCCC-CEEeccCCCCeE
Confidence 9999999764 4443322 23568999999999999999999997 9999999999999999887 799999999986
Q ss_pred cCCCCCC--ccceeccCccCchhhcC-----CCCCCcchhhHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCCHH
Q 011138 290 LVPGEPN--ISYICSRYYRAPELIFG-----ATEYTTAIDMWSIGCVLAELLLGQPLFPGESGVDQLVEIIKILGTPTRE 362 (492)
Q Consensus 290 ~~~~~~~--~~~~gt~~y~aPE~~~~-----~~~~~~~~DvwSlGvil~ell~G~~pf~~~~~~~~~~~i~~~~g~p~~~ 362 (492)
....... ....||+.|+|||++.. ...++.++|||||||++|+|++|..||...+....+.++....
T Consensus 152 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~DiwslG~il~el~~g~~Pf~~~~~~~~~~~i~~~~------ 225 (330)
T cd05601 152 LTANKMVNSKLPVGTPDYIAPEVLTTMNGDGKGTYGVECDWWSLGVIAYEMIYGRSPFHEGTSAKTYNNIMNFQ------ 225 (330)
T ss_pred CCCCCceeeecccCCccccCHHHhccccccccCCCCCcceeecccceeeeeccCCCCCCCCCHHHHHHHHHcCC------
Confidence 6433322 23478999999999863 3457899999999999999999999998887766666554310
Q ss_pred HHhhcCCCCcccCCCcccCCCcccccCCCCChhHhhhhccccccCCCCcCCHHHhhCCCCCCCCCC
Q 011138 363 EIKCMNPNYTEFKFPQIKAHPWHKIFHKRMPPEALDLVSRLLQYSPSLRCTALEACAHPFFDDLRD 428 (492)
Q Consensus 363 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~Li~~~L~~dP~~R~t~~e~l~Hp~f~~~~~ 428 (492)
....+|. ...+++++++||.+||. ||.+|||+.++++||||+.+..
T Consensus 226 ---------~~~~~~~----------~~~~~~~~~~li~~ll~-~p~~R~t~~~l~~h~~~~~~~~ 271 (330)
T cd05601 226 ---------RFLKFPE----------DPKVSSDFLDLIQSLLC-GQKERLGYEGLCCHPFFSKIDW 271 (330)
T ss_pred ---------CccCCCC----------CCCCCHHHHHHHHHHcc-ChhhCCCHHHHhCCCCcCCCCH
Confidence 0111221 12478999999999998 9999999999999999997643
No 80
>cd05621 STKc_ROCK2 Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase 2. Serine/Threonine Kinases (STKs), ROCK subfamily, ROCK2 (or ROK-alpha) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK contains an N-terminal extension, a catalytic kinase domain, and a C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain, and is activated via interaction with Rho GTPases. ROCK2 was the first identified target of activated RhoA, and was found
Probab=100.00 E-value=4e-45 Score=371.34 Aligned_cols=255 Identities=29% Similarity=0.476 Sum_probs=206.7
Q ss_pred cccceeEeeeeccCCceEEEEEEEcCCCCEEEEEEeccc-------hhhHHHHHHHHHHcCCCCccccceeeeeccCCCc
Q 011138 135 QTISYMAERVVGTGSFGVVFQAKCLETGDSVAIKKVLQD-------KRYKNRELQIMRLLNHPNVVSLKHCFFSTTEKDE 207 (492)
Q Consensus 135 ~~~~y~~~~~lG~G~fg~Vy~~~~~~~g~~vAiK~~~~~-------~~~~~~E~~il~~l~h~nIv~l~~~~~~~~~~~~ 207 (492)
...+|.+.+.||+|+||.||++.+..+++.||+|++.+. .....+|+.+++.++||||++++++| .+.
T Consensus 41 ~~~~y~~~~~lG~G~fg~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~i~~~~~hp~iv~~~~~~-----~~~ 115 (370)
T cd05621 41 KAEDYDVVKVIGRGAFGEVQLVRHKSSQKVYAMKLLSKFEMIKRSDSAFFWEERDIMAFANSPWVVQLFCAF-----QDD 115 (370)
T ss_pred CHHHCeEEEEEEecCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhhHHHHHHHHHHHHhCCCCCEeeEEEEE-----EcC
Confidence 345799999999999999999999999999999988542 22345799999999999999999988 455
Q ss_pred eEEEEEeeechhh-HHHHhhhhhhcCCCcCHHHHHHHHHHHHHHHHHHHhhCCcccCCCCCCceEEcCCCCcEEEeeecC
Q 011138 208 LYLNLVLEYISET-VYRVSKHYTRMNQHVPILYVQLYTYQICRALNYLHHVVGVCHRDIKPQNLLVNPHTHQLKICDFGS 286 (492)
Q Consensus 208 ~~~~lV~E~~~~~-l~~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~yLH~~~givHrDlKp~NILl~~~~~~vkL~DFG~ 286 (492)
.++|+||||++++ |..++. ...+++..++.++.||+.||+|||+ +||+||||||+|||++.++ .+||+|||+
T Consensus 116 ~~~~lv~Ey~~gg~L~~~l~-----~~~~~~~~~~~~~~qil~aL~~LH~-~~IvHrDLKp~NILl~~~~-~~kL~DFG~ 188 (370)
T cd05621 116 KYLYMVMEYMPGGDLVNLMS-----NYDVPEKWAKFYTAEVVLALDAIHS-MGLIHRDVKPDNMLLDKHG-HLKLADFGT 188 (370)
T ss_pred CEEEEEEcCCCCCcHHHHHH-----hcCCCHHHHHHHHHHHHHHHHHHHH-CCeEecCCCHHHEEECCCC-CEEEEeccc
Confidence 5799999999865 444332 2357889999999999999999997 9999999999999999887 799999999
Q ss_pred ccccCCCC--CCccceeccCccCchhhcCCC---CCCcchhhHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCCH
Q 011138 287 AKMLVPGE--PNISYICSRYYRAPELIFGAT---EYTTAIDMWSIGCVLAELLLGQPLFPGESGVDQLVEIIKILGTPTR 361 (492)
Q Consensus 287 a~~~~~~~--~~~~~~gt~~y~aPE~~~~~~---~~~~~~DvwSlGvil~ell~G~~pf~~~~~~~~~~~i~~~~g~p~~ 361 (492)
+....... .....+||+.|+|||++.+.. .++.++|||||||++|+|++|.+||.+.+....+.++.....
T Consensus 189 a~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~~~~~~DiwSlG~ilyell~G~~Pf~~~~~~~~~~~i~~~~~---- 264 (370)
T cd05621 189 CMKMDETGMVRCDTAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLFEMLVGDTPFYADSLVGTYSKIMDHKN---- 264 (370)
T ss_pred ceecccCCceecccCCCCcccCCHHHHhccCCCCCCCcccCEEeehHHHHHHHhCCCCCCCCCHHHHHHHHHhCCc----
Confidence 98653322 123567999999999996542 378899999999999999999999998887766666554211
Q ss_pred HHHhhcCCCCcccCCCcccCCCcccccCCCCChhHhhhhccccccCCCC--cCCHHHhhCCCCCCCC
Q 011138 362 EEIKCMNPNYTEFKFPQIKAHPWHKIFHKRMPPEALDLVSRLLQYSPSL--RCTALEACAHPFFDDL 426 (492)
Q Consensus 362 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~Li~~~L~~dP~~--R~t~~e~l~Hp~f~~~ 426 (492)
.+.+|. ...++..+++||.+||+.++.+ |+++.|+++||||+..
T Consensus 265 -----------~~~~p~----------~~~~s~~~~~li~~~L~~~~~r~~R~~~~e~l~hp~~~~~ 310 (370)
T cd05621 265 -----------SLNFPE----------DVEISKHAKNLICAFLTDREVRLGRNGVEEIKQHPFFKND 310 (370)
T ss_pred -----------ccCCCC----------cccCCHHHHHHHHHHccCchhccCCCCHHHHhcCcccCCC
Confidence 111221 1246899999999999866554 8999999999999874
No 81
>cd05598 STKc_LATS Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor. Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS was originally identified in Drosophila using a screen for genes whose inactivation led to overproliferation of cells. In tetrapods, there are two LATS isoforms, LATS1 and LATS2. Inactivation of LATS1 in mice results in the development of various tumors, including sarcomas and ovarian cancer. LATS functions as a tumor suppressor and is implicated in cell cycle regulation.
Probab=100.00 E-value=2e-45 Score=374.87 Aligned_cols=252 Identities=28% Similarity=0.449 Sum_probs=202.3
Q ss_pred ceeEeeeeccCCceEEEEEEEcCCCCEEEEEEeccc-------hhhHHHHHHHHHHcCCCCccccceeeeeccCCCceEE
Q 011138 138 SYMAERVVGTGSFGVVFQAKCLETGDSVAIKKVLQD-------KRYKNRELQIMRLLNHPNVVSLKHCFFSTTEKDELYL 210 (492)
Q Consensus 138 ~y~~~~~lG~G~fg~Vy~~~~~~~g~~vAiK~~~~~-------~~~~~~E~~il~~l~h~nIv~l~~~~~~~~~~~~~~~ 210 (492)
+|.+.+.||+|+||.||+|++..+|+.||||++.+. .....+|+.+|+.++||||+++++.| .+..++
T Consensus 2 ~y~~~~~lG~G~~g~V~~a~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~il~~l~h~~iv~~~~~~-----~~~~~~ 76 (376)
T cd05598 2 MFVKIKTIGIGAFGEVCLVRKVDTNALYAMKTLRKADVLMRNQAAHVKAERDILAEADNEWVVKLYYSF-----QDKDNL 76 (376)
T ss_pred CceEEEEEEeCCCeEEEEEEECCCCCEEEEEEEcHHHHHhhhhHHHHHHHHHHHHhCCCCCcceEEEEE-----EcCCEE
Confidence 599999999999999999999999999999998542 22345799999999999999999988 445579
Q ss_pred EEEeeechhh-HHHHhhhhhhcCCCcCHHHHHHHHHHHHHHHHHHHhhCCcccCCCCCCceEEcCCCCcEEEeeecCccc
Q 011138 211 NLVLEYISET-VYRVSKHYTRMNQHVPILYVQLYTYQICRALNYLHHVVGVCHRDIKPQNLLVNPHTHQLKICDFGSAKM 289 (492)
Q Consensus 211 ~lV~E~~~~~-l~~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~yLH~~~givHrDlKp~NILl~~~~~~vkL~DFG~a~~ 289 (492)
|+||||++++ |.+.+.. ...+++..++.++.||+.||+|||+ +||+||||||+|||++.++ .+||+|||+|..
T Consensus 77 ~lv~E~~~~g~L~~~i~~----~~~~~~~~~~~~~~qi~~al~~lH~-~~ivHrDlkp~Nill~~~~-~ikL~DFG~a~~ 150 (376)
T cd05598 77 YFVMDYIPGGDMMSLLIR----LGIFEEDLARFYIAELTCAIESVHK-MGFIHRDIKPDNILIDRDG-HIKLTDFGLCTG 150 (376)
T ss_pred EEEEeCCCCCcHHHHHHh----cCCCCHHHHHHHHHHHHHHHHHHHH-CCeEeCCCCHHHEEECCCC-CEEEEeCCCCcc
Confidence 9999999865 4444332 3568889999999999999999997 9999999999999999887 799999999753
Q ss_pred cCCC--------------------------------------------CCCccceeccCccCchhhcCCCCCCcchhhHH
Q 011138 290 LVPG--------------------------------------------EPNISYICSRYYRAPELIFGATEYTTAIDMWS 325 (492)
Q Consensus 290 ~~~~--------------------------------------------~~~~~~~gt~~y~aPE~~~~~~~~~~~~DvwS 325 (492)
+... ......+||+.|+|||++.+. .++.++||||
T Consensus 151 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~~DiwS 229 (376)
T cd05598 151 FRWTHDSKYYQKGDHHRQDSMEPSEEWSEIDRCRLKPLERRRKRQHQRCLAHSLVGTPNYIAPEVLLRT-GYTQLCDWWS 229 (376)
T ss_pred ccccccccccccccccccccccccccccccccccccchhhhhhhhcccccccccCCCccccCHHHHcCC-CCCcceeeee
Confidence 2100 001135799999999999654 4899999999
Q ss_pred HHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCCHHHHhhcCCCCcccCCCcccCCCcccccCCCCChhHhhhhccccc
Q 011138 326 IGCVLAELLLGQPLFPGESGVDQLVEIIKILGTPTREEIKCMNPNYTEFKFPQIKAHPWHKIFHKRMPPEALDLVSRLLQ 405 (492)
Q Consensus 326 lGvil~ell~G~~pf~~~~~~~~~~~i~~~~g~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~Li~~~L~ 405 (492)
|||++|||++|+.||.+.+..+....+.... ....++. ...+++++.+||.+|+
T Consensus 230 lGvilyell~G~~Pf~~~~~~~~~~~i~~~~---------------~~~~~~~----------~~~~s~~~~~li~~l~- 283 (376)
T cd05598 230 VGVILYEMLVGQPPFLADTPAETQLKVINWE---------------TTLHIPS----------QAKLSREASDLILRLC- 283 (376)
T ss_pred ccceeeehhhCCCCCCCCCHHHHHHHHhccC---------------ccccCCC----------CCCCCHHHHHHHHHHh-
Confidence 9999999999999999887665554443210 0011111 1347899999999976
Q ss_pred cCCCCcC---CHHHhhCCCCCCCCC
Q 011138 406 YSPSLRC---TALEACAHPFFDDLR 427 (492)
Q Consensus 406 ~dP~~R~---t~~e~l~Hp~f~~~~ 427 (492)
.+|.+|+ ++.++++||||+.+.
T Consensus 284 ~~p~~R~~~~t~~ell~h~~~~~~~ 308 (376)
T cd05598 284 CGAEDRLGKNGADEIKAHPFFKGID 308 (376)
T ss_pred cCHhhcCCCCCHHHHhCCCCcCCCC
Confidence 5999999 999999999999753
No 82
>PLN00034 mitogen-activated protein kinase kinase; Provisional
Probab=100.00 E-value=1.3e-44 Score=365.73 Aligned_cols=254 Identities=28% Similarity=0.373 Sum_probs=199.5
Q ss_pred cccceeEeeeeccCCceEEEEEEEcCCCCEEEEEEeccc-----hhhHHHHHHHHHHcCCCCccccceeeeeccCCCceE
Q 011138 135 QTISYMAERVVGTGSFGVVFQAKCLETGDSVAIKKVLQD-----KRYKNRELQIMRLLNHPNVVSLKHCFFSTTEKDELY 209 (492)
Q Consensus 135 ~~~~y~~~~~lG~G~fg~Vy~~~~~~~g~~vAiK~~~~~-----~~~~~~E~~il~~l~h~nIv~l~~~~~~~~~~~~~~ 209 (492)
....|...+.||+|+||.||+|.+..+|+.||||++... ...+.+|+++++.++|+||+++++++ .+...
T Consensus 72 ~~~~~~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~-----~~~~~ 146 (353)
T PLN00034 72 SLSELERVNRIGSGAGGTVYKVIHRPTGRLYALKVIYGNHEDTVRRQICREIEILRDVNHPNVVKCHDMF-----DHNGE 146 (353)
T ss_pred CHHHHhhhhhccCCCCeEEEEEEECCCCCEEEEEEEecCCcHHHHHHHHHHHHHHHhCCCCCcceeeeEe-----ccCCe
Confidence 345688899999999999999999999999999998543 23356899999999999999999988 44556
Q ss_pred EEEEeeechhhHHHHhhhhhhcCCCcCHHHHHHHHHHHHHHHHHHHhhCCcccCCCCCCceEEcCCCCcEEEeeecCccc
Q 011138 210 LNLVLEYISETVYRVSKHYTRMNQHVPILYVQLYTYQICRALNYLHHVVGVCHRDIKPQNLLVNPHTHQLKICDFGSAKM 289 (492)
Q Consensus 210 ~~lV~E~~~~~l~~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~yLH~~~givHrDlKp~NILl~~~~~~vkL~DFG~a~~ 289 (492)
+++||||+.++.+.. .....+..+..++.||+.||.|||+ +||+||||||+|||++.++ .+||+|||+++.
T Consensus 147 ~~lv~e~~~~~~L~~-------~~~~~~~~~~~i~~qi~~aL~~LH~-~~ivHrDlkp~NIll~~~~-~~kL~DfG~~~~ 217 (353)
T PLN00034 147 IQVLLEFMDGGSLEG-------THIADEQFLADVARQILSGIAYLHR-RHIVHRDIKPSNLLINSAK-NVKIADFGVSRI 217 (353)
T ss_pred EEEEEecCCCCcccc-------cccCCHHHHHHHHHHHHHHHHHHHH-CCEeecCCCHHHEEEcCCC-CEEEccccccee
Confidence 899999999764421 1234567788899999999999997 9999999999999999887 799999999986
Q ss_pred cCCCC-CCccceeccCccCchhhcC----CCCCCcchhhHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCCHHHH
Q 011138 290 LVPGE-PNISYICSRYYRAPELIFG----ATEYTTAIDMWSIGCVLAELLLGQPLFPGESGVDQLVEIIKILGTPTREEI 364 (492)
Q Consensus 290 ~~~~~-~~~~~~gt~~y~aPE~~~~----~~~~~~~~DvwSlGvil~ell~G~~pf~~~~~~~~~~~i~~~~g~p~~~~~ 364 (492)
..... ......||..|+|||++.. ...++.++|||||||++|||++|+.||......+....+.......
T Consensus 218 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DvwslGvil~el~~g~~pf~~~~~~~~~~~~~~~~~~~----- 292 (353)
T PLN00034 218 LAQTMDPCNSSVGTIAYMSPERINTDLNHGAYDGYAGDIWSLGVSILEFYLGRFPFGVGRQGDWASLMCAICMSQ----- 292 (353)
T ss_pred cccccccccccccCccccCccccccccccCcCCCcchhHHHHHHHHHHHHhCCCCCCCCCCccHHHHHHHHhccC-----
Confidence 54322 2345689999999998743 2234568999999999999999999997543322222111110000
Q ss_pred hhcCCCCcccCCCcccCCCcccccCCCCChhHhhhhccccccCCCCcCCHHHhhCCCCCCCCC
Q 011138 365 KCMNPNYTEFKFPQIKAHPWHKIFHKRMPPEALDLVSRLLQYSPSLRCTALEACAHPFFDDLR 427 (492)
Q Consensus 365 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~Li~~~L~~dP~~R~t~~e~l~Hp~f~~~~ 427 (492)
. ......++.++++||.+||..||++|||+.|+++||||....
T Consensus 293 -----------~---------~~~~~~~~~~l~~li~~~l~~~P~~Rpt~~ell~hp~~~~~~ 335 (353)
T PLN00034 293 -----------P---------PEAPATASREFRHFISCCLQREPAKRWSAMQLLQHPFILRAQ 335 (353)
T ss_pred -----------C---------CCCCCccCHHHHHHHHHHccCChhhCcCHHHHhcCcccccCC
Confidence 0 001235788999999999999999999999999999999754
No 83
>cd05594 STKc_PKB_alpha Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B alpha. Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, alpha (or Akt1) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-alpha is predominantly expressed in endothelial cells. It is critical for the regulation of angiogenesis and the maintenance of vascular integrity. It also plays a role in adipocyte differentiation. Mice deficien
Probab=100.00 E-value=1.8e-45 Score=367.77 Aligned_cols=247 Identities=28% Similarity=0.437 Sum_probs=200.1
Q ss_pred eeeccCCceEEEEEEEcCCCCEEEEEEeccch-------hhHHHHHHHHHHcCCCCccccceeeeeccCCCceEEEEEee
Q 011138 143 RVVGTGSFGVVFQAKCLETGDSVAIKKVLQDK-------RYKNRELQIMRLLNHPNVVSLKHCFFSTTEKDELYLNLVLE 215 (492)
Q Consensus 143 ~~lG~G~fg~Vy~~~~~~~g~~vAiK~~~~~~-------~~~~~E~~il~~l~h~nIv~l~~~~~~~~~~~~~~~~lV~E 215 (492)
+.||+|+||.||+|.+..+|+.||+|++.... ....+|+.+++.++||||++++++| ....++|+|||
T Consensus 1 ~~lG~G~~g~V~~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~~~e~~~l~~~~hp~i~~~~~~~-----~~~~~~~lv~E 75 (325)
T cd05594 1 KLLGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQNSRHPFLTALKYSF-----QTHDRLCFVME 75 (325)
T ss_pred CeeeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCCCCCCceEEEE-----EcCCEEEEEEe
Confidence 36999999999999999999999999986431 2234688999999999999999888 44456899999
Q ss_pred echhhHHHHhhhhhhcCCCcCHHHHHHHHHHHHHHHHHHHhhCCcccCCCCCCceEEcCCCCcEEEeeecCccccCC-CC
Q 011138 216 YISETVYRVSKHYTRMNQHVPILYVQLYTYQICRALNYLHHVVGVCHRDIKPQNLLVNPHTHQLKICDFGSAKMLVP-GE 294 (492)
Q Consensus 216 ~~~~~l~~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~yLH~~~givHrDlKp~NILl~~~~~~vkL~DFG~a~~~~~-~~ 294 (492)
|++++.+... ......+++..++.++.||+.||.|||+.+||+||||||+|||++.++ .+||+|||+++.... ..
T Consensus 76 ~~~~~~L~~~---l~~~~~l~~~~~~~~~~qi~~aL~~lH~~~~ivHrDikp~NIll~~~~-~~kL~Dfg~~~~~~~~~~ 151 (325)
T cd05594 76 YANGGELFFH---LSRERVFSEDRARFYGAEIVSALDYLHSEKNVVYRDLKLENLMLDKDG-HIKITDFGLCKEGIKDGA 151 (325)
T ss_pred CCCCCcHHHH---HHhcCCCCHHHHHHHHHHHHHHHHHHHhcCCEEecCCCCCeEEECCCC-CEEEecCCCCeecCCCCc
Confidence 9987644321 122456899999999999999999999426999999999999999887 799999999875432 22
Q ss_pred CCccceeccCccCchhhcCCCCCCcchhhHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCCHHHHhhcCCCCccc
Q 011138 295 PNISYICSRYYRAPELIFGATEYTTAIDMWSIGCVLAELLLGQPLFPGESGVDQLVEIIKILGTPTREEIKCMNPNYTEF 374 (492)
Q Consensus 295 ~~~~~~gt~~y~aPE~~~~~~~~~~~~DvwSlGvil~ell~G~~pf~~~~~~~~~~~i~~~~g~p~~~~~~~~~~~~~~~ 374 (492)
......||+.|+|||++.+. .++.++|||||||++|+|++|..||.+.+.......+.. ...
T Consensus 152 ~~~~~~gt~~y~aPE~~~~~-~~~~~~DiwslG~il~el~tG~~Pf~~~~~~~~~~~i~~-----------------~~~ 213 (325)
T cd05594 152 TMKTFCGTPEYLAPEVLEDN-DYGRAVDWWGLGVVMYEMMCGRLPFYNQDHEKLFELILM-----------------EEI 213 (325)
T ss_pred ccccccCCcccCCHHHHccC-CCCCccccccccceeeeeccCCCCCCCCCHHHHHHHHhc-----------------CCC
Confidence 33356799999999999654 489999999999999999999999988776544444322 111
Q ss_pred CCCcccCCCcccccCCCCChhHhhhhccccccCCCCcC-----CHHHhhCCCCCCCCCC
Q 011138 375 KFPQIKAHPWHKIFHKRMPPEALDLVSRLLQYSPSLRC-----TALEACAHPFFDDLRD 428 (492)
Q Consensus 375 ~~~~~~~~~~~~~~~~~~s~~~~~Li~~~L~~dP~~R~-----t~~e~l~Hp~f~~~~~ 428 (492)
. ++..+++++.+||.+||+.||++|+ ++.++++||||+....
T Consensus 214 ~------------~p~~~~~~~~~li~~~L~~dP~~R~~~~~~~~~~il~h~~~~~~~~ 260 (325)
T cd05594 214 R------------FPRTLSPEAKSLLSGLLKKDPKQRLGGGPDDAKEIMQHKFFAGIVW 260 (325)
T ss_pred C------------CCCCCCHHHHHHHHHHhhcCHHHhCCCCCCCHHHHhcCCCcCCCCH
Confidence 1 2235789999999999999999997 8999999999997643
No 84
>PHA03207 serine/threonine kinase US3; Provisional
Probab=100.00 E-value=1.6e-44 Score=370.13 Aligned_cols=277 Identities=21% Similarity=0.322 Sum_probs=212.1
Q ss_pred cceeEeeeeccCCceEEEEEEEc--CCCCEEEEEEeccchhhHHHHHHHHHHcCCCCccccceeeeeccCCCceEEEEEe
Q 011138 137 ISYMAERVVGTGSFGVVFQAKCL--ETGDSVAIKKVLQDKRYKNRELQIMRLLNHPNVVSLKHCFFSTTEKDELYLNLVL 214 (492)
Q Consensus 137 ~~y~~~~~lG~G~fg~Vy~~~~~--~~g~~vAiK~~~~~~~~~~~E~~il~~l~h~nIv~l~~~~~~~~~~~~~~~~lV~ 214 (492)
.+|.+.+.||+|+||.||+|... .++..||+|.+... ....+|+.+++.++|||||+++++| .....+|+||
T Consensus 92 ~~y~i~~~Lg~G~~g~Vy~~~~~~~~~~~~v~vK~~~~~-~~~~~E~~il~~l~h~~iv~~~~~~-----~~~~~~~lv~ 165 (392)
T PHA03207 92 MQYNILSSLTPGSEGEVFVCTKHGDEQRKKVIVKAVTGG-KTPGREIDILKTISHRAIINLIHAY-----RWKSTVCMVM 165 (392)
T ss_pred CceEEEEeecCCCCeEEEEEEEcCCccceeEEEEecccc-ccHHHHHHHHHhcCCCCccceeeeE-----eeCCEEEEEe
Confidence 46999999999999999999754 35678999987654 3456899999999999999999988 4445689999
Q ss_pred eechhhHHHHhhhhhhcCCCcCHHHHHHHHHHHHHHHHHHHhhCCcccCCCCCCceEEcCCCCcEEEeeecCccccCCCC
Q 011138 215 EYISETVYRVSKHYTRMNQHVPILYVQLYTYQICRALNYLHHVVGVCHRDIKPQNLLVNPHTHQLKICDFGSAKMLVPGE 294 (492)
Q Consensus 215 E~~~~~l~~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~yLH~~~givHrDlKp~NILl~~~~~~vkL~DFG~a~~~~~~~ 294 (492)
|++.++++..+. ....+++..+..++.||+.||.|||+ +||+||||||+|||++.++ .+||+|||++.......
T Consensus 166 e~~~~~l~~~l~----~~~~l~~~~~~~i~~ql~~aL~~LH~-~givHrDlkp~Nill~~~~-~~~l~DfG~a~~~~~~~ 239 (392)
T PHA03207 166 PKYKCDLFTYVD----RSGPLPLEQAITIQRRLLEALAYLHG-RGIIHRDVKTENIFLDEPE-NAVLGDFGAACKLDAHP 239 (392)
T ss_pred hhcCCCHHHHHH----hcCCCCHHHHHHHHHHHHHHHHHHHH-CCccccCCCHHHEEEcCCC-CEEEccCccccccCccc
Confidence 999988776552 24578999999999999999999997 9999999999999999887 79999999997654322
Q ss_pred C---CccceeccCccCchhhcCCCCCCcchhhHHHHHHHHHHHhCCCCCCCCC---hHHHHHHHHHHhCCCCHHHHhhcC
Q 011138 295 P---NISYICSRYYRAPELIFGATEYTTAIDMWSIGCVLAELLLGQPLFPGES---GVDQLVEIIKILGTPTREEIKCMN 368 (492)
Q Consensus 295 ~---~~~~~gt~~y~aPE~~~~~~~~~~~~DvwSlGvil~ell~G~~pf~~~~---~~~~~~~i~~~~g~p~~~~~~~~~ 368 (492)
. .....||+.|+|||++.+. .|+.++|||||||++|||++|+.||.+.. ....+..+++.++..+.+......
T Consensus 240 ~~~~~~~~~gt~~y~aPE~~~~~-~~~~~~DvwslGvil~el~~g~~pf~~~~~~~~~~~l~~i~~~~~~~~~~~~~~~~ 318 (392)
T PHA03207 240 DTPQCYGWSGTLETNSPELLALD-PYCAKTDIWSAGLVLFEMSVKNVTLFGKQVKSSSSQLRSIIRCMQVHPLEFPQNGS 318 (392)
T ss_pred ccccccccccccCccCHhHhcCC-CCCchhhHHHHHHHHHHHHHCCCCCCCCCCCCcHHHHHHHHHHhccCccccCCccc
Confidence 1 2346799999999999654 48999999999999999999999997754 356677777776654432111000
Q ss_pred C----CCcccCCCcccCCCcccc-cCCCCChhHhhhhccccccCCCCcCCHHHhhCCCCCCCC
Q 011138 369 P----NYTEFKFPQIKAHPWHKI-FHKRMPPEALDLVSRLLQYSPSLRCTALEACAHPFFDDL 426 (492)
Q Consensus 369 ~----~~~~~~~~~~~~~~~~~~-~~~~~s~~~~~Li~~~L~~dP~~R~t~~e~l~Hp~f~~~ 426 (492)
. .+..+.........+... ....++.++.+||++||++||++|||+.++|+||||+..
T Consensus 319 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~ml~~dp~~Rpsa~e~l~~p~f~~~ 381 (392)
T PHA03207 319 TNLCKHFKQYAIVLRPPYTIPPVIRKYGMHMDVEYLIAKMLTFDQEFRPSAQDILSLPLFTKE 381 (392)
T ss_pred hhHHHHHHhhcccccCCccccchhhccCcchhHHHHHHHHhccChhhCCCHHHHhhCchhhcc
Confidence 0 000011000000001111 112467889999999999999999999999999999864
No 85
>KOG0201 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=1.4e-46 Score=363.56 Aligned_cols=252 Identities=25% Similarity=0.398 Sum_probs=207.4
Q ss_pred cceeEeeeeccCCceEEEEEEEcCCCCEEEEEEeccch-----hhHHHHHHHHHHcCCCCccccceeeeeccCCCceEEE
Q 011138 137 ISYMAERVVGTGSFGVVFQAKCLETGDSVAIKKVLQDK-----RYKNRELQIMRLLNHPNVVSLKHCFFSTTEKDELYLN 211 (492)
Q Consensus 137 ~~y~~~~~lG~G~fg~Vy~~~~~~~g~~vAiK~~~~~~-----~~~~~E~~il~~l~h~nIv~l~~~~~~~~~~~~~~~~ 211 (492)
..|...++||+|+||.||+|.+..+++.||||++.-+. ...++|+.+|.+++++||.++|+.|+... .++
T Consensus 13 ~~~~~~~~IgrGsfG~Vyk~~d~~t~k~vAiKii~Le~~~deIediqqei~~Ls~~~~~~it~yygsyl~g~-----~Lw 87 (467)
T KOG0201|consen 13 LLYTKLELIGRGSFGEVYKAIDNKTKKVVAIKIIDLEEAEDEIEDIQQEISVLSQCDSPNITEYYGSYLKGT-----KLW 87 (467)
T ss_pred cccccchhccccccceeeeeeeccccceEEEEEechhhcchhhHHHHHHHHHHHhcCcchHHhhhhheeecc-----cHH
Confidence 35888899999999999999999999999999985432 34568999999999999999999995444 489
Q ss_pred EEeeechhhHHHHhhhhhhcCCCcCHHHHHHHHHHHHHHHHHHHhhCCcccCCCCCCceEEcCCCCcEEEeeecCccccC
Q 011138 212 LVLEYISETVYRVSKHYTRMNQHVPILYVQLYTYQICRALNYLHHVVGVCHRDIKPQNLLVNPHTHQLKICDFGSAKMLV 291 (492)
Q Consensus 212 lV~E~~~~~l~~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~yLH~~~givHrDlKp~NILl~~~~~~vkL~DFG~a~~~~ 291 (492)
++||||.|+....+ ......+.+..+..++++++.||.|||. ++.+|||||+.|||+..++ .+||+|||.+..+.
T Consensus 88 iiMey~~gGsv~~l---L~~~~~~~E~~i~~ilre~l~~l~ylH~-~~kiHrDIKaanil~s~~g-~vkl~DfgVa~ql~ 162 (467)
T KOG0201|consen 88 IIMEYCGGGSVLDL---LKSGNILDEFEIAVILREVLKGLDYLHS-EKKIHRDIKAANILLSESG-DVKLADFGVAGQLT 162 (467)
T ss_pred HHHHHhcCcchhhh---hccCCCCccceeeeehHHHHHHhhhhhh-cceecccccccceeEeccC-cEEEEecceeeeee
Confidence 99999997644322 2234445788888899999999999997 9999999999999999886 89999999998775
Q ss_pred CCCC-CccceeccCccCchhhcCCCCCCcchhhHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCCHHHHhhcCCC
Q 011138 292 PGEP-NISYICSRYYRAPELIFGATEYTTAIDMWSIGCVLAELLLGQPLFPGESGVDQLVEIIKILGTPTREEIKCMNPN 370 (492)
Q Consensus 292 ~~~~-~~~~~gt~~y~aPE~~~~~~~~~~~~DvwSlGvil~ell~G~~pf~~~~~~~~~~~i~~~~g~p~~~~~~~~~~~ 370 (492)
.... ..+++|||+|||||++.+ ..|+.++||||||++.|||++|.+||....+...+..|-+
T Consensus 163 ~~~~rr~tfvGTPfwMAPEVI~~-~~Y~~KADIWSLGITaiEla~GePP~s~~hPmrvlflIpk---------------- 225 (467)
T KOG0201|consen 163 NTVKRRKTFVGTPFWMAPEVIKQ-SGYDTKADIWSLGITAIELAKGEPPHSKLHPMRVLFLIPK---------------- 225 (467)
T ss_pred chhhccccccccccccchhhhcc-ccccchhhhhhhhHHHHHHhcCCCCCcccCcceEEEeccC----------------
Confidence 5443 378999999999999974 4599999999999999999999999988765333332211
Q ss_pred CcccCCCcccCCCcccccCCCCChhHhhhhccccccCCCCcCCHHHhhCCCCCCCCC
Q 011138 371 YTEFKFPQIKAHPWHKIFHKRMPPEALDLVSRLLQYSPSLRCTALEACAHPFFDDLR 427 (492)
Q Consensus 371 ~~~~~~~~~~~~~~~~~~~~~~s~~~~~Li~~~L~~dP~~R~t~~e~l~Hp~f~~~~ 427 (492)
-.. ..+....++.+++||..||++||+.||+|.++|.|+|++...
T Consensus 226 --------~~P----P~L~~~~S~~~kEFV~~CL~k~P~~RpsA~~LLKh~FIk~a~ 270 (467)
T KOG0201|consen 226 --------SAP----PRLDGDFSPPFKEFVEACLDKNPEFRPSAKELLKHKFIKRAK 270 (467)
T ss_pred --------CCC----CccccccCHHHHHHHHHHhhcCcccCcCHHHHhhhHHHHhcC
Confidence 110 112235688999999999999999999999999999998743
No 86
>cd07845 STKc_CDK10 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 10. Serine/Threonine Kinases (STKs), Cyclin-dependent protein Kinase 10 (CDK10) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK10 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK10, also called PISSLRE, is essential for cell growth and proliferation, and acts through the G2/M phase of the cell cycle. CDK10 has also been identified as an important factor in endocrine therapy resistance in breast cancer. CDK10 silencing
Probab=100.00 E-value=2.3e-44 Score=357.00 Aligned_cols=284 Identities=35% Similarity=0.556 Sum_probs=226.3
Q ss_pred ccceeEeeeeccCCceEEEEEEEcCCCCEEEEEEeccch------hhHHHHHHHHHHcCCCCccccceeeeeccCCCceE
Q 011138 136 TISYMAERVVGTGSFGVVFQAKCLETGDSVAIKKVLQDK------RYKNRELQIMRLLNHPNVVSLKHCFFSTTEKDELY 209 (492)
Q Consensus 136 ~~~y~~~~~lG~G~fg~Vy~~~~~~~g~~vAiK~~~~~~------~~~~~E~~il~~l~h~nIv~l~~~~~~~~~~~~~~ 209 (492)
..+|.+.+.||+|+||.||+|.+..+|+.||+|.+.... ....+|+.+++.++|+||+++++++... ....
T Consensus 6 ~~~y~~~~~ig~g~~~~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~---~~~~ 82 (309)
T cd07845 6 VTEFEKLNRIGEGTYGIVYRARDTTSGEIVALKKVRMDNERDGIPISSLREITLLLNLRHPNIVELKEVVVGK---HLDS 82 (309)
T ss_pred ccceeEeeeeeecCCEEEEEEEECCCCcEEEEEEEEeccCCCCCcchhhHHHHHHHhCCCCCCcceEEEEecC---CCCe
Confidence 346999999999999999999999999999999885321 1234799999999999999999987532 2235
Q ss_pred EEEEeeechhhHHHHhhhhhhcCCCcCHHHHHHHHHHHHHHHHHHHhhCCcccCCCCCCceEEcCCCCcEEEeeecCccc
Q 011138 210 LNLVLEYISETVYRVSKHYTRMNQHVPILYVQLYTYQICRALNYLHHVVGVCHRDIKPQNLLVNPHTHQLKICDFGSAKM 289 (492)
Q Consensus 210 ~~lV~E~~~~~l~~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~yLH~~~givHrDlKp~NILl~~~~~~vkL~DFG~a~~ 289 (492)
+++||||+.+++..++... ...+++..+..++.||+.||.|||+ .||+||||||+||+++.++ .+||+|||++..
T Consensus 83 ~~lv~e~~~~~l~~~l~~~---~~~l~~~~~~~~~~qi~~~l~~lH~-~~i~H~dl~p~nil~~~~~-~~kL~dfg~~~~ 157 (309)
T cd07845 83 IFLVMEYCEQDLASLLDNM---PTPFSESQVKCLMLQLLRGLQYLHE-NFIIHRDLKVSNLLLTDKG-CLKIADFGLART 157 (309)
T ss_pred EEEEEecCCCCHHHHHHhc---ccCCCHHHHHHHHHHHHHHHHHHHh-CCeecCCCCHHHEEECCCC-CEEECccceeee
Confidence 7899999998776655432 3568899999999999999999997 9999999999999999887 799999999986
Q ss_pred cCCCC-CCccceeccCccCchhhcCCCCCCcchhhHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCCHHHHhhcC
Q 011138 290 LVPGE-PNISYICSRYYRAPELIFGATEYTTAIDMWSIGCVLAELLLGQPLFPGESGVDQLVEIIKILGTPTREEIKCMN 368 (492)
Q Consensus 290 ~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~~~~DvwSlGvil~ell~G~~pf~~~~~~~~~~~i~~~~g~p~~~~~~~~~ 368 (492)
..... ......+++.|+|||++.+...++.++|||||||++|+|++|.+||.+.+..+.+..+...++.+....+....
T Consensus 158 ~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~DvwslG~il~el~~g~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 237 (309)
T cd07845 158 YGLPAKPMTPKVVTLWYRAPELLLGCTTYTTAIDMWAVGCILAELLAHKPLLPGKSEIEQLDLIIQLLGTPNESIWPGFS 237 (309)
T ss_pred cCCccCCCCcccccccccChhhhcCCCCcCchHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhcCCCChhhchhhh
Confidence 64332 22234568889999999776668999999999999999999999999999999999999999888776554332
Q ss_pred --CCCcccCCCcccCCCcccccCCCCChhHhhhhccccccCCCCcCCHHHhhCCCCCCCCCC
Q 011138 369 --PNYTEFKFPQIKAHPWHKIFHKRMPPEALDLVSRLLQYSPSLRCTALEACAHPFFDDLRD 428 (492)
Q Consensus 369 --~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~Li~~~L~~dP~~R~t~~e~l~Hp~f~~~~~ 428 (492)
+....+.++......+... ...+++++.+||++||++||++|||+.++++||||++...
T Consensus 238 ~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~li~~ml~~dp~~R~t~~~il~h~~f~~~~~ 298 (309)
T cd07845 238 DLPLVGKFTLPKQPYNNLKHK-FPWLSEAGLRLLNFLLMYDPKKRATAEEALESSYFKEKPL 298 (309)
T ss_pred cccccccccccCCCCCchHHh-ccccCHHHHHHHHHHhcCChhhCcCHHHHhcChhhccCCC
Confidence 1112222222111111111 1236889999999999999999999999999999987543
No 87
>cd05614 STKc_MSK2_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase 2. Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, MSK2, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, which trigger phosphorylation in the activation loop (A-loop) of the CTD of MSK. The active CTD phosphorylates the hydroph
Probab=100.00 E-value=4.7e-45 Score=365.82 Aligned_cols=254 Identities=30% Similarity=0.487 Sum_probs=200.7
Q ss_pred ceeEeeeeccCCceEEEEEEEc---CCCCEEEEEEeccch--------hhHHHHHHHHHHcC-CCCccccceeeeeccCC
Q 011138 138 SYMAERVVGTGSFGVVFQAKCL---ETGDSVAIKKVLQDK--------RYKNRELQIMRLLN-HPNVVSLKHCFFSTTEK 205 (492)
Q Consensus 138 ~y~~~~~lG~G~fg~Vy~~~~~---~~g~~vAiK~~~~~~--------~~~~~E~~il~~l~-h~nIv~l~~~~~~~~~~ 205 (492)
+|.+.+.||+|+||.||++++. .+|+.||+|++.+.. ....+|+.+++.++ |+||++++++| .
T Consensus 1 ~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~i~~~~~~~-----~ 75 (332)
T cd05614 1 NFELLKVLGTGAYGKVFLVRKVTGHDTGKLYAMKVLQKAALVQKAKTVEHTRTERNVLEHVRQSPFLVTLHYAF-----Q 75 (332)
T ss_pred CceEEEEEeecCCEEEEEEEEcccCCCCCEEEEEEEEHHHHhhhhhHHHHHHHHHHHHHhccCCCCcccEEEEE-----e
Confidence 4899999999999999999864 578999999885421 22456999999994 99999999888 4
Q ss_pred CceEEEEEeeechhh-HHHHhhhhhhcCCCcCHHHHHHHHHHHHHHHHHHHhhCCcccCCCCCCceEEcCCCCcEEEeee
Q 011138 206 DELYLNLVLEYISET-VYRVSKHYTRMNQHVPILYVQLYTYQICRALNYLHHVVGVCHRDIKPQNLLVNPHTHQLKICDF 284 (492)
Q Consensus 206 ~~~~~~lV~E~~~~~-l~~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~yLH~~~givHrDlKp~NILl~~~~~~vkL~DF 284 (492)
...++|+||||+.++ +...+. ....+++..++.++.||+.||.|||+ +||+||||||+|||++.++ .+||+||
T Consensus 76 ~~~~~~lv~e~~~~g~L~~~l~----~~~~~~~~~~~~~~~qi~~~l~~lH~-~~ivHrDlkp~Nili~~~~-~~kl~Df 149 (332)
T cd05614 76 TEAKLHLILDYVSGGEMFTHLY----QRDNFSEDEVRFYSGEIILALEHLHK-LGIVYRDIKLENILLDSEG-HVVLTDF 149 (332)
T ss_pred cCCEEEEEEeCCCCCcHHHHHH----HcCCCCHHHHHHHHHHHHHHHHHHHH-CCcEecCCCHHHeEECCCC-CEEEeeC
Confidence 555689999999865 433332 24568899999999999999999997 9999999999999999887 7999999
Q ss_pred cCccccCCCC--CCccceeccCccCchhhcCCCCCCcchhhHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCCHH
Q 011138 285 GSAKMLVPGE--PNISYICSRYYRAPELIFGATEYTTAIDMWSIGCVLAELLLGQPLFPGESGVDQLVEIIKILGTPTRE 362 (492)
Q Consensus 285 G~a~~~~~~~--~~~~~~gt~~y~aPE~~~~~~~~~~~~DvwSlGvil~ell~G~~pf~~~~~~~~~~~i~~~~g~p~~~ 362 (492)
|+++...... ......||+.|+|||++.+...++.++|||||||++|||++|..||...........+...+..
T Consensus 150 G~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~elltg~~pf~~~~~~~~~~~~~~~~~~---- 225 (332)
T cd05614 150 GLSKEFLSEEKERTYSFCGTIEYMAPEIIRGKGGHGKAVDWWSLGILIFELLTGASPFTLEGERNTQSEVSRRILK---- 225 (332)
T ss_pred cCCccccccCCCccccccCCccccCHHHhcCCCCCCCccccccchhhhhhhhcCCCCCCCCCCCCCHHHHHHHHhc----
Confidence 9997653322 2234679999999999976666889999999999999999999999754332222222111000
Q ss_pred HHhhcCCCCcccCCCcccCCCcccccCCCCChhHhhhhccccccCCCCcC-----CHHHhhCCCCCCCCC
Q 011138 363 EIKCMNPNYTEFKFPQIKAHPWHKIFHKRMPPEALDLVSRLLQYSPSLRC-----TALEACAHPFFDDLR 427 (492)
Q Consensus 363 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~Li~~~L~~dP~~R~-----t~~e~l~Hp~f~~~~ 427 (492)
. . ..++..+++.+++||.+||+.||++|| +++++++||||++..
T Consensus 226 ----~-----~------------~~~~~~~~~~~~~li~~~l~~dp~~R~~~~~~~~~~~l~h~~~~~~~ 274 (332)
T cd05614 226 ----C-----D------------PPFPSFIGPEAQDLLHKLLRKDPKKRLGAGPQGASEIKEHPFFKGLD 274 (332)
T ss_pred ----C-----C------------CCCCCCCCHHHHHHHHHHcCCCHHHcCCCCCCCHHHHHcCCCcCCCC
Confidence 0 0 012345789999999999999999999 788999999999764
No 88
>cd05605 STKc_GRK4_like Catalytic domain of G protein-coupled Receptor Kinase 4-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK4-like group, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. Members of the GRK4-like group include GRK4, GRK5,
Probab=100.00 E-value=1.1e-44 Score=355.39 Aligned_cols=255 Identities=27% Similarity=0.394 Sum_probs=205.9
Q ss_pred eeEeeeeccCCceEEEEEEEcCCCCEEEEEEeccch-------hhHHHHHHHHHHcCCCCccccceeeeeccCCCceEEE
Q 011138 139 YMAERVVGTGSFGVVFQAKCLETGDSVAIKKVLQDK-------RYKNRELQIMRLLNHPNVVSLKHCFFSTTEKDELYLN 211 (492)
Q Consensus 139 y~~~~~lG~G~fg~Vy~~~~~~~g~~vAiK~~~~~~-------~~~~~E~~il~~l~h~nIv~l~~~~~~~~~~~~~~~~ 211 (492)
|++.+.||+|+||.||++.+..+++.||||++.... ....+|+.+++.++||||+++++++ ....++|
T Consensus 2 y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~-----~~~~~~~ 76 (285)
T cd05605 2 FRHYRVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGEAMALNEKQILEKVNSRFVVSLAYAY-----ETKDALC 76 (285)
T ss_pred ceEEEEEecCCCeEEEEEEEcCCCceEEEEEEehhhhhhhhhHHHHHHHHHHHHhcCCCCEeeeeeee-----cCCCeEE
Confidence 889999999999999999999999999999885431 2234799999999999999999988 4445799
Q ss_pred EEeeechhhHHHHhhhhhhcCCCcCHHHHHHHHHHHHHHHHHHHhhCCcccCCCCCCceEEcCCCCcEEEeeecCccccC
Q 011138 212 LVLEYISETVYRVSKHYTRMNQHVPILYVQLYTYQICRALNYLHHVVGVCHRDIKPQNLLVNPHTHQLKICDFGSAKMLV 291 (492)
Q Consensus 212 lV~E~~~~~l~~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~yLH~~~givHrDlKp~NILl~~~~~~vkL~DFG~a~~~~ 291 (492)
+||||+.++.+..... ......+++..+..++.||+.||.|||+ .||+||||||+||+++.++ .++|+|||++....
T Consensus 77 lv~e~~~~~~L~~~~~-~~~~~~~~~~~~~~~~~qi~~~l~~lH~-~~ivH~dlkp~Nil~~~~~-~~~l~Dfg~~~~~~ 153 (285)
T cd05605 77 LVLTLMNGGDLKFHIY-NMGNPGFDEERAVFYAAEITCGLEDLHR-ERIVYRDLKPENILLDDYG-HIRISDLGLAVEIP 153 (285)
T ss_pred EEEeccCCCcHHHHHH-hcCcCCCCHHHHHHHHHHHHHHHHHHHH-CCcEecCCCHHHEEECCCC-CEEEeeCCCceecC
Confidence 9999998654432221 1223568999999999999999999997 9999999999999999877 79999999998764
Q ss_pred CCCCCccceeccCccCchhhcCCCCCCcchhhHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCCHHHHhhcCCCC
Q 011138 292 PGEPNISYICSRYYRAPELIFGATEYTTAIDMWSIGCVLAELLLGQPLFPGESGVDQLVEIIKILGTPTREEIKCMNPNY 371 (492)
Q Consensus 292 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DvwSlGvil~ell~G~~pf~~~~~~~~~~~i~~~~g~p~~~~~~~~~~~~ 371 (492)
........+|++.|+|||++.+. .++.++||||+||++|+|++|..||.+.+.......+...+...
T Consensus 154 ~~~~~~~~~~~~~y~aPE~~~~~-~~~~~~Diws~G~~l~el~~g~~pf~~~~~~~~~~~~~~~~~~~------------ 220 (285)
T cd05605 154 EGETIRGRVGTVGYMAPEVVKNE-RYTFSPDWWGLGCLIYEMIEGKSPFRQRKEKVKREEVERRVKED------------ 220 (285)
T ss_pred CCCccccccCCCCccCcHHhcCC-CCCccccchhHHHHHHHHHHCCCCCCCCchhhHHHHHHHHhhhc------------
Confidence 44444456889999999999654 48999999999999999999999998866544433333221100
Q ss_pred cccCCCcccCCCcccccCCCCChhHhhhhccccccCCCCcC-----CHHHhhCCCCCCCCC
Q 011138 372 TEFKFPQIKAHPWHKIFHKRMPPEALDLVSRLLQYSPSLRC-----TALEACAHPFFDDLR 427 (492)
Q Consensus 372 ~~~~~~~~~~~~~~~~~~~~~s~~~~~Li~~~L~~dP~~R~-----t~~e~l~Hp~f~~~~ 427 (492)
. ..++..+++.+.+||.+||..||.+|| ++.++++||||....
T Consensus 221 -~------------~~~~~~~~~~~~~li~~~l~~~P~~R~~~~~~~~~~l~~~~~~~~~~ 268 (285)
T cd05605 221 -Q------------EEYSEKFSEAARSICRQLLTKDPGFRLGCRGEGAEEVKAHPFFRTAN 268 (285)
T ss_pred -c------------cccCcccCHHHHHHHHHHccCCHHHhcCCCCCCHHHHhcCcCccCCC
Confidence 0 012235789999999999999999999 899999999998753
No 89
>cd05587 STKc_cPKC Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C. Serine/Threonine Kinases (STKs), Classical (or Conventional) Protein Kinase C (cPKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. cPKCs contain a calcium-binding C2 region in their regulatory
Probab=100.00 E-value=8.9e-45 Score=362.62 Aligned_cols=249 Identities=28% Similarity=0.449 Sum_probs=202.1
Q ss_pred ceeEeeeeccCCceEEEEEEEcCCCCEEEEEEeccch-------hhHHHHHHHHHHcCCC-CccccceeeeeccCCCceE
Q 011138 138 SYMAERVVGTGSFGVVFQAKCLETGDSVAIKKVLQDK-------RYKNRELQIMRLLNHP-NVVSLKHCFFSTTEKDELY 209 (492)
Q Consensus 138 ~y~~~~~lG~G~fg~Vy~~~~~~~g~~vAiK~~~~~~-------~~~~~E~~il~~l~h~-nIv~l~~~~~~~~~~~~~~ 209 (492)
+|.+.+.||+|+||.||+|.+..+++.||||++..+. .....|..++..+.|+ +|++++++| .+..+
T Consensus 1 ~y~~~~~lg~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~i~~~~~~~-----~~~~~ 75 (324)
T cd05587 1 DFNFLMVLGKGSFGKVMLAERKGTDELYAIKILKKDVIIQDDDVECTMVEKRVLALPGKPPFLTQLHSCF-----QTMDR 75 (324)
T ss_pred CceEEEEEeeccCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhcCCCCceeeeEEEE-----EcCCE
Confidence 4889999999999999999999999999999986432 2234688889999765 577888887 34446
Q ss_pred EEEEeeechhhHH-HHhhhhhhcCCCcCHHHHHHHHHHHHHHHHHHHhhCCcccCCCCCCceEEcCCCCcEEEeeecCcc
Q 011138 210 LNLVLEYISETVY-RVSKHYTRMNQHVPILYVQLYTYQICRALNYLHHVVGVCHRDIKPQNLLVNPHTHQLKICDFGSAK 288 (492)
Q Consensus 210 ~~lV~E~~~~~l~-~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~yLH~~~givHrDlKp~NILl~~~~~~vkL~DFG~a~ 288 (492)
+|+||||++++.+ ..+. ....+++..+..++.||+.||.|||+ +||+||||||+|||++.++ .+||+|||++.
T Consensus 76 ~~lv~E~~~~g~L~~~~~----~~~~~~~~~~~~~~~qi~~al~~lH~-~~ivH~dlkp~Nill~~~~-~~kL~Dfg~~~ 149 (324)
T cd05587 76 LYFVMEYVNGGDLMYHIQ----QVGKFKEPHAVFYAAEIAIGLFFLHS-KGIIYRDLKLDNVMLDAEG-HIKIADFGMCK 149 (324)
T ss_pred EEEEEcCCCCCcHHHHHH----HcCCCCHHHHHHHHHHHHHHHHHHHH-CCeEecCCCHHHeEEcCCC-CEEEeecCcce
Confidence 8999999986533 3322 23568889999999999999999997 9999999999999999887 79999999987
Q ss_pred ccC-CCCCCccceeccCccCchhhcCCCCCCcchhhHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCCHHHHhhc
Q 011138 289 MLV-PGEPNISYICSRYYRAPELIFGATEYTTAIDMWSIGCVLAELLLGQPLFPGESGVDQLVEIIKILGTPTREEIKCM 367 (492)
Q Consensus 289 ~~~-~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DvwSlGvil~ell~G~~pf~~~~~~~~~~~i~~~~g~p~~~~~~~~ 367 (492)
... ........+||+.|+|||++.+. .++.++|||||||++|+|++|+.||.+.+..+.+..+...
T Consensus 150 ~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~~DiwslGvil~elltG~~pf~~~~~~~~~~~i~~~------------ 216 (324)
T cd05587 150 ENIFGGKTTRTFCGTPDYIAPEIIAYQ-PYGKSVDWWAFGVLLYEMLAGQPPFDGEDEDELFQSIMEH------------ 216 (324)
T ss_pred ecCCCCCceeeecCCccccChhhhcCC-CCCcccchhhhHHHHHHHHhCCCCCCCCCHHHHHHHHHcC------------
Confidence 532 22233456799999999999764 4899999999999999999999999988776665555331
Q ss_pred CCCCcccCCCcccCCCcccccCCCCChhHhhhhccccccCCCCcCCH-----HHhhCCCCCCCCC
Q 011138 368 NPNYTEFKFPQIKAHPWHKIFHKRMPPEALDLVSRLLQYSPSLRCTA-----LEACAHPFFDDLR 427 (492)
Q Consensus 368 ~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~Li~~~L~~dP~~R~t~-----~e~l~Hp~f~~~~ 427 (492)
... ++..+++++++||.+||+.||.+|++. .++++||||+.+.
T Consensus 217 -----~~~------------~~~~~~~~~~~li~~~l~~~P~~R~~~~~~~~~~~~~hp~~~~~~ 264 (324)
T cd05587 217 -----NVS------------YPKSLSKEAVSICKGLLTKHPAKRLGCGPTGERDIREHAFFRRID 264 (324)
T ss_pred -----CCC------------CCCCCCHHHHHHHHHHhhcCHHHcCCCCCCCHHHHhcCCCcCCCC
Confidence 111 223578999999999999999999986 8999999998764
No 90
>PHA03209 serine/threonine kinase US3; Provisional
Probab=100.00 E-value=6.9e-45 Score=368.23 Aligned_cols=277 Identities=25% Similarity=0.375 Sum_probs=207.8
Q ss_pred cceeEeeeeccCCceEEEEEEEcCCCCEEEEEEeccchhhHHHHHHHHHHcCCCCccccceeeeeccCCCceEEEEEeee
Q 011138 137 ISYMAERVVGTGSFGVVFQAKCLETGDSVAIKKVLQDKRYKNRELQIMRLLNHPNVVSLKHCFFSTTEKDELYLNLVLEY 216 (492)
Q Consensus 137 ~~y~~~~~lG~G~fg~Vy~~~~~~~g~~vAiK~~~~~~~~~~~E~~il~~l~h~nIv~l~~~~~~~~~~~~~~~~lV~E~ 216 (492)
.+|.+.+.||+|+||.||+|.+..+++.||+|+.... ....|+.+++.++||||+++++++. ...+.++|||+
T Consensus 66 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~valK~~~~~--~~~~E~~~l~~l~h~~iv~~~~~~~-----~~~~~~lv~e~ 138 (357)
T PHA03209 66 LGYTVIKTLTPGSEGRVFVATKPGQPDPVVLKIGQKG--TTLIEAMLLQNVNHPSVIRMKDTLV-----SGAITCMVLPH 138 (357)
T ss_pred cCcEEEEEecCCCCeEEEEEEECCCCceEEEEeCCcc--ccHHHHHHHHhCCCCCCcChhheEE-----eCCeeEEEEEc
Confidence 4699999999999999999999999999999975433 2346999999999999999999984 33458899999
Q ss_pred chhhHHHHhhhhhhcCCCcCHHHHHHHHHHHHHHHHHHHhhCCcccCCCCCCceEEcCCCCcEEEeeecCccccCCCCCC
Q 011138 217 ISETVYRVSKHYTRMNQHVPILYVQLYTYQICRALNYLHHVVGVCHRDIKPQNLLVNPHTHQLKICDFGSAKMLVPGEPN 296 (492)
Q Consensus 217 ~~~~l~~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~yLH~~~givHrDlKp~NILl~~~~~~vkL~DFG~a~~~~~~~~~ 296 (492)
+.++++..+.. ....+++..+..++.||+.||.|||+ +||+||||||+|||++.++ .+||+|||+++........
T Consensus 139 ~~~~l~~~l~~---~~~~~~~~~~~~i~~qi~~aL~~LH~-~~ivHrDlkp~Nill~~~~-~~kl~DfG~a~~~~~~~~~ 213 (357)
T PHA03209 139 YSSDLYTYLTK---RSRPLPIDQALIIEKQILEGLRYLHA-QRIIHRDVKTENIFINDVD-QVCIGDLGAAQFPVVAPAF 213 (357)
T ss_pred cCCcHHHHHHh---ccCCCCHHHHHHHHHHHHHHHHHHHH-CCeecCCCCHHHEEECCCC-CEEEecCccccccccCccc
Confidence 99887775533 34568999999999999999999997 9999999999999999887 7999999999754433344
Q ss_pred ccceeccCccCchhhcCCCCCCcchhhHHHHHHHHHHHhCC-CCCCCCC---------hHHHHHHHHHHhCCCCHHHHhh
Q 011138 297 ISYICSRYYRAPELIFGATEYTTAIDMWSIGCVLAELLLGQ-PLFPGES---------GVDQLVEIIKILGTPTREEIKC 366 (492)
Q Consensus 297 ~~~~gt~~y~aPE~~~~~~~~~~~~DvwSlGvil~ell~G~-~pf~~~~---------~~~~~~~i~~~~g~p~~~~~~~ 366 (492)
....||+.|+|||++.+. .++.++|||||||++|||+++. ++|.... ....+..++..++..+.....+
T Consensus 214 ~~~~gt~~y~aPE~~~~~-~~~~~~DiwSlGvvl~ell~~~~~~f~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~ 292 (357)
T PHA03209 214 LGLAGTVETNAPEVLARD-KYNSKADIWSAGIVLFEMLAYPSTIFEDPPSTPEEYVKSCHSHLLKIISTLKVHPEEFPRD 292 (357)
T ss_pred ccccccccccCCeecCCC-CCCchhhHHHHHHHHHHHHHcCCccccCCCCcHHHHHHHHHHHHHHHHHHhccChhhcCCC
Confidence 456799999999999665 4899999999999999999854 4444322 1234455555555433221100
Q ss_pred cCCCCc--ccCCCcccCCC---cccccCCCCChhHhhhhccccccCCCCcCCHHHhhCCCCCCCC
Q 011138 367 MNPNYT--EFKFPQIKAHP---WHKIFHKRMPPEALDLVSRLLQYSPSLRCTALEACAHPFFDDL 426 (492)
Q Consensus 367 ~~~~~~--~~~~~~~~~~~---~~~~~~~~~s~~~~~Li~~~L~~dP~~R~t~~e~l~Hp~f~~~ 426 (492)
...... .+.+......+ +...-...++.++.+||.+||++||.+|||+.|+|+||||+++
T Consensus 293 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~mL~~dP~~Rpta~e~l~hp~f~~~ 357 (357)
T PHA03209 293 PGSRLVRGFIEYASLERQPYTRYPCFQRVNLPIDGEFLVHKMLTFDAAMRPSAEEILNYPMFAQL 357 (357)
T ss_pred CccHHHHHHHhhcccCCCcccccHHHhccCCCchHHHHHHHHHcCCcccCcCHHHHhcCchhccC
Confidence 000000 00000000001 1011112568889999999999999999999999999999864
No 91
>cd07837 STKc_CdkB_plant Catalytic domain of the Serine/Threonine Kinase, Plant B-type Cyclin-Dependent protein Kinase. Serine/Threonine Kinases (STKs), Plant B-type Cyclin-Dependent protein Kinase (CdkB) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CdkB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. The plant-specific B-type CDKs are expressed from the late S to the M phase of the cell cycle. They are characterized by the cyclin binding motif PPT[A/T]LRE. They play a role in controlling mitosis and integrating developm
Probab=100.00 E-value=2.7e-44 Score=353.71 Aligned_cols=285 Identities=34% Similarity=0.596 Sum_probs=224.1
Q ss_pred ceeEeeeeccCCceEEEEEEEcCCCCEEEEEEeccch------hhHHHHHHHHHHcC-CCCccccceeeeeccCCCceEE
Q 011138 138 SYMAERVVGTGSFGVVFQAKCLETGDSVAIKKVLQDK------RYKNRELQIMRLLN-HPNVVSLKHCFFSTTEKDELYL 210 (492)
Q Consensus 138 ~y~~~~~lG~G~fg~Vy~~~~~~~g~~vAiK~~~~~~------~~~~~E~~il~~l~-h~nIv~l~~~~~~~~~~~~~~~ 210 (492)
+|.+.+.||+|+||.||+|.+..+|+.||||.+.... ....+|+.+++.+. ||||+++++++...........
T Consensus 2 ~y~~~~~lg~g~~g~vy~~~~~~~~~~v~lK~~~~~~~~~~~~~~~~~E~~~l~~l~~~~~i~~~~~~~~~~~~~~~~~~ 81 (295)
T cd07837 2 AYEKLEKIGEGTYGKVYKARDKNTGKLVALKKTRLEMDEEGIPPTALREISLLQMLSESIYIVRLLDVEHVEEKNGKPSL 81 (295)
T ss_pred CceEeeEecccCCeEEEEEEECCCCcEEEEEeehhhccccCCchHHHHHHHHHHHccCCCCccceeeeEeecCCCCCceE
Confidence 5899999999999999999999999999999875432 23457999999995 6999999998865544445568
Q ss_pred EEEeeechhhHHHHhhhhhhc-CCCcCHHHHHHHHHHHHHHHHHHHhhCCcccCCCCCCceEEcCCCCcEEEeeecCccc
Q 011138 211 NLVLEYISETVYRVSKHYTRM-NQHVPILYVQLYTYQICRALNYLHHVVGVCHRDIKPQNLLVNPHTHQLKICDFGSAKM 289 (492)
Q Consensus 211 ~lV~E~~~~~l~~~~~~~~~~-~~~~~~~~~~~i~~qi~~aL~yLH~~~givHrDlKp~NILl~~~~~~vkL~DFG~a~~ 289 (492)
|+||||+++++...+...... ...+++..++.++.||+.||.|||+ +||+||||||+||+++.+...+||+|||++..
T Consensus 82 ~lv~e~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~qi~~~L~~LH~-~~i~H~dl~~~nil~~~~~~~~kl~dfg~~~~ 160 (295)
T cd07837 82 YLVFEYLDSDLKKFMDSNGRGPGRPLPAKTIKSFMYQLLKGVAHCHK-HGVMHRDLKPQNLLVDKQKGLLKIADLGLGRA 160 (295)
T ss_pred EEEeeccCcCHHHHHHHhcccCCCCCCHHHHHHHHHHHHHHHHHHHH-CCeeecCCChHHEEEecCCCeEEEeeccccee
Confidence 899999998877765443322 3568999999999999999999997 99999999999999998344899999999875
Q ss_pred cCCC-CCCccceeccCccCchhhcCCCCCCcchhhHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCCHHHHhhcC
Q 011138 290 LVPG-EPNISYICSRYYRAPELIFGATEYTTAIDMWSIGCVLAELLLGQPLFPGESGVDQLVEIIKILGTPTREEIKCMN 368 (492)
Q Consensus 290 ~~~~-~~~~~~~gt~~y~aPE~~~~~~~~~~~~DvwSlGvil~ell~G~~pf~~~~~~~~~~~i~~~~g~p~~~~~~~~~ 368 (492)
.... .......+++.|+|||++.+...++.++|||||||++|+|++|.+||.+.+..+.+..+.+.++.|....+....
T Consensus 161 ~~~~~~~~~~~~~~~~~~aPE~~~~~~~~~~~~Di~slG~~l~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 240 (295)
T cd07837 161 FSIPVKSYTHEIVTLWYRAPEVLLGSTHYSTPVDIWSVGCIFAEMSRKQPLFPGDSELQQLLHIFKLLGTPTEQVWPGVS 240 (295)
T ss_pred cCCCccccCCcccccCCCChHHhhCCCCCCchHHHHHHHHHHHHHHcCCCCCCCCCHHHHHHHHHHHhCCCChhhCcchh
Confidence 5322 222334678899999998766668999999999999999999999999999988888898888887766543321
Q ss_pred CCCcccCCCcccCCCcccccCCCCChhHhhhhccccccCCCCcCCHHHhhCCCCCC
Q 011138 369 PNYTEFKFPQIKAHPWHKIFHKRMPPEALDLVSRLLQYSPSLRCTALEACAHPFFD 424 (492)
Q Consensus 369 ~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~Li~~~L~~dP~~R~t~~e~l~Hp~f~ 424 (492)
.......++....... ....+.+++++.+||.+||.+||.+||++.+++.||||+
T Consensus 241 ~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~i~~~l~~~P~~R~~~~eil~~~~~~ 295 (295)
T cd07837 241 KLRDWHEFPQWKPQDL-SRAVPDLSPEGLDLLQKMLRYDPAKRISAKAALTHPYFD 295 (295)
T ss_pred hccchhhcCcccchhH-HHhccccCHHHHHHHHHHccCChhhcCCHHHHhcCCCcC
Confidence 1111111221111111 111235789999999999999999999999999999995
No 92
>cd05591 STKc_nPKC_epsilon Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C epsilon. Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), epsilon isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-epsilon has been shown to behave as an oncoprotein. Its overexpression contributes to
Probab=100.00 E-value=6.3e-45 Score=363.23 Aligned_cols=244 Identities=27% Similarity=0.485 Sum_probs=199.7
Q ss_pred eeeccCCceEEEEEEEcCCCCEEEEEEeccch-------hhHHHHHHHHHHc-CCCCccccceeeeeccCCCceEEEEEe
Q 011138 143 RVVGTGSFGVVFQAKCLETGDSVAIKKVLQDK-------RYKNRELQIMRLL-NHPNVVSLKHCFFSTTEKDELYLNLVL 214 (492)
Q Consensus 143 ~~lG~G~fg~Vy~~~~~~~g~~vAiK~~~~~~-------~~~~~E~~il~~l-~h~nIv~l~~~~~~~~~~~~~~~~lV~ 214 (492)
++||+|+||.||+|++..+|+.||||++..+. .....|..+++.+ +||||++++++| .+...+|+||
T Consensus 1 ~~lG~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~il~~~~~hp~i~~~~~~~-----~~~~~~~lv~ 75 (321)
T cd05591 1 KVLGKGSFGKVMLAELKGTDEVYAIKVLKKDVILQDDDVDCTMTEKRILALAAKHPFLTALHCCF-----QTKDRLFFVM 75 (321)
T ss_pred CccccCCCeEEEEEEECCCCCEEEEEEEeHHHhhhhhHHHHHHHHHHHHHhccCCCCccceeeEE-----EcCCeEEEEE
Confidence 36999999999999999999999999986532 2234688888766 799999999998 4445689999
Q ss_pred eechhhHH-HHhhhhhhcCCCcCHHHHHHHHHHHHHHHHHHHhhCCcccCCCCCCceEEcCCCCcEEEeeecCccccCC-
Q 011138 215 EYISETVY-RVSKHYTRMNQHVPILYVQLYTYQICRALNYLHHVVGVCHRDIKPQNLLVNPHTHQLKICDFGSAKMLVP- 292 (492)
Q Consensus 215 E~~~~~l~-~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~yLH~~~givHrDlKp~NILl~~~~~~vkL~DFG~a~~~~~- 292 (492)
||++++.+ ..+. ....+++..++.++.||+.||.|||+ +||+||||||+|||++.++ .+||+|||++.....
T Consensus 76 E~~~~~~L~~~l~----~~~~~~~~~~~~~~~qi~~aL~~LH~-~~ivHrDikp~Nill~~~~-~~kL~Dfg~~~~~~~~ 149 (321)
T cd05591 76 EYVNGGDLMFQIQ----RSRKFDEPRSRFYAAEVTLALMFLHR-HGVIYRDLKLDNILLDAEG-HCKLADFGMCKEGILN 149 (321)
T ss_pred eCCCCCcHHHHHH----HcCCCCHHHHHHHHHHHHHHHHHHHH-CCeeccCCCHHHeEECCCC-CEEEeecccceecccC
Confidence 99987543 3322 24568889999999999999999997 9999999999999999888 799999999875422
Q ss_pred CCCCccceeccCccCchhhcCCCCCCcchhhHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCCHHHHhhcCCCCc
Q 011138 293 GEPNISYICSRYYRAPELIFGATEYTTAIDMWSIGCVLAELLLGQPLFPGESGVDQLVEIIKILGTPTREEIKCMNPNYT 372 (492)
Q Consensus 293 ~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DvwSlGvil~ell~G~~pf~~~~~~~~~~~i~~~~g~p~~~~~~~~~~~~~ 372 (492)
........||+.|+|||++.+. .++.++|||||||++|+|++|+.||.+.+..+.+..+.. .
T Consensus 150 ~~~~~~~~gt~~y~aPE~~~~~-~~~~~~DvwslG~il~el~tg~~Pf~~~~~~~~~~~i~~-----------------~ 211 (321)
T cd05591 150 GVTTTTFCGTPDYIAPEILQEL-EYGPSVDWWALGVLMYEMMAGQPPFEADNEDDLFESILH-----------------D 211 (321)
T ss_pred CccccccccCccccCHHHHcCC-CCCCccceechhHHHHHHhcCCCCCCCCCHHHHHHHHHc-----------------C
Confidence 2233456799999999998654 489999999999999999999999998887766665543 1
Q ss_pred ccCCCcccCCCcccccCCCCChhHhhhhccccccCCCCcC-------CHHHhhCCCCCCCCC
Q 011138 373 EFKFPQIKAHPWHKIFHKRMPPEALDLVSRLLQYSPSLRC-------TALEACAHPFFDDLR 427 (492)
Q Consensus 373 ~~~~~~~~~~~~~~~~~~~~s~~~~~Li~~~L~~dP~~R~-------t~~e~l~Hp~f~~~~ 427 (492)
... ++..+++++.+||.+||+.||.+|+ ++.++++||||..+.
T Consensus 212 ~~~------------~p~~~~~~~~~ll~~~L~~dp~~R~~~~~~~~~~~~~~~hp~~~~~~ 261 (321)
T cd05591 212 DVL------------YPVWLSKEAVSILKAFMTKNPNKRLGCVASQGGEDAIKQHPFFKEID 261 (321)
T ss_pred CCC------------CCCCCCHHHHHHHHHHhccCHHHcCCCCCCCCCHHHHhcCCccCCCC
Confidence 111 1234689999999999999999999 899999999998754
No 93
>cd07850 STKc_JNK Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase. Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase (JNK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. They are also essential regulators of physiological and pathological processes and are involved in the pathogenesis of several diseases such as diabetes, atherosclerosis, stroke, Parkinson's and Alzheimer's. Vetebrates harbor three different JNK
Probab=100.00 E-value=2.7e-44 Score=363.43 Aligned_cols=287 Identities=32% Similarity=0.574 Sum_probs=226.3
Q ss_pred cceeEeeeeccCCceEEEEEEEcCCCCEEEEEEeccc------hhhHHHHHHHHHHcCCCCccccceeeeeccC-CCceE
Q 011138 137 ISYMAERVVGTGSFGVVFQAKCLETGDSVAIKKVLQD------KRYKNRELQIMRLLNHPNVVSLKHCFFSTTE-KDELY 209 (492)
Q Consensus 137 ~~y~~~~~lG~G~fg~Vy~~~~~~~g~~vAiK~~~~~------~~~~~~E~~il~~l~h~nIv~l~~~~~~~~~-~~~~~ 209 (492)
.+|.+.+.||+|+||.||+|.+..+|+.||||.+.+. .....+|+.+++.++||||++++++|..... .+..+
T Consensus 16 ~~y~~~~~lg~g~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~ 95 (353)
T cd07850 16 KRYQNLKPIGSGAQGIVCAAYDTVTGQNVAIKKLSRPFQNVTHAKRAYRELVLMKLVNHKNIIGLLNVFTPQKSLEEFQD 95 (353)
T ss_pred cceEEEEEeccCCCEEEEEEEECCCCCEEEEEecCccccChhHHHHHHHHHHHHHhcCCCCCcceeeeeccCCCccccCc
Confidence 4699999999999999999999999999999987532 1234479999999999999999998754332 22345
Q ss_pred EEEEeeechhhHHHHhhhhhhcCCCcCHHHHHHHHHHHHHHHHHHHhhCCcccCCCCCCceEEcCCCCcEEEeeecCccc
Q 011138 210 LNLVLEYISETVYRVSKHYTRMNQHVPILYVQLYTYQICRALNYLHHVVGVCHRDIKPQNLLVNPHTHQLKICDFGSAKM 289 (492)
Q Consensus 210 ~~lV~E~~~~~l~~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~yLH~~~givHrDlKp~NILl~~~~~~vkL~DFG~a~~ 289 (492)
.|+||||+.+++...+.. .++...+..++.||+.||.|||+ +||+||||||+|||++.++ .+||+|||+++.
T Consensus 96 ~~lv~e~~~~~l~~~~~~------~l~~~~~~~~~~ql~~aL~~LH~-~gi~H~dlkp~Nil~~~~~-~~kL~Dfg~~~~ 167 (353)
T cd07850 96 VYLVMELMDANLCQVIQM------DLDHERMSYLLYQMLCGIKHLHS-AGIIHRDLKPSNIVVKSDC-TLKILDFGLART 167 (353)
T ss_pred EEEEEeccCCCHHHHHhh------cCCHHHHHHHHHHHHHHHHHHHh-CCeeeCCCCHHHEEECCCC-CEEEccCcccee
Confidence 789999999877765432 27888899999999999999997 8999999999999999888 799999999987
Q ss_pred cCCCCCCccceeccCccCchhhcCCCCCCcchhhHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCCHHHHhhcCC
Q 011138 290 LVPGEPNISYICSRYYRAPELIFGATEYTTAIDMWSIGCVLAELLLGQPLFPGESGVDQLVEIIKILGTPTREEIKCMNP 369 (492)
Q Consensus 290 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DvwSlGvil~ell~G~~pf~~~~~~~~~~~i~~~~g~p~~~~~~~~~~ 369 (492)
...........+++.|+|||.+.+. .++.++|||||||++|+|++|+.||.+.+.......+...++.|+.+.+.....
T Consensus 168 ~~~~~~~~~~~~~~~y~aPE~~~~~-~~~~~~DvwslG~~l~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 246 (353)
T cd07850 168 AGTSFMMTPYVVTRYYRAPEVILGM-GYKENVDIWSVGCIMGEMIRGTVLFPGTDHIDQWNKIIEQLGTPSDEFMSRLQP 246 (353)
T ss_pred CCCCCCCCCCcccccccCHHHHhCC-CCCCchhhHhHHHHHHHHHHCCCCCCCCCHHHHHHHHHHhcCCCCHHHHHHhhh
Confidence 6544444456789999999999765 489999999999999999999999999998888999999999988765443221
Q ss_pred CC----------cccCCCcccC-CCc---ccccCCCCChhHhhhhccccccCCCCcCCHHHhhCCCCCCCCCCCCCC
Q 011138 370 NY----------TEFKFPQIKA-HPW---HKIFHKRMPPEALDLVSRLLQYSPSLRCTALEACAHPFFDDLRDPNTC 432 (492)
Q Consensus 370 ~~----------~~~~~~~~~~-~~~---~~~~~~~~s~~~~~Li~~~L~~dP~~R~t~~e~l~Hp~f~~~~~~~~~ 432 (492)
.. ....+..... ..+ ........++++++||.+||+.||++|||+.|+|+||||+.+-++..+
T Consensus 247 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~eiL~~~~~~~~~~~~~~ 323 (353)
T cd07850 247 TVRNYVENRPKYAGYSFEELFPDVLFPPDSESHNKLKASQARDLLSKMLVIDPEKRISVDDALQHPYINVWYDPSEV 323 (353)
T ss_pred hhhHHhhcCCCCCCcchhhhCcccccCcccccccccchhHHHHHHHHHcCCChhhCcCHHHHhcChhHhhccCCccC
Confidence 11 1111111000 000 000122456789999999999999999999999999999987765444
No 94
>cd05608 STKc_GRK1 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 1. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK1, also called rhodopsin kinase, belongs to the visual g
Probab=100.00 E-value=1.1e-44 Score=354.38 Aligned_cols=251 Identities=26% Similarity=0.374 Sum_probs=198.9
Q ss_pred eccCCceEEEEEEEcCCCCEEEEEEeccch-------hhHHHHHHHHHHcCCCCccccceeeeeccCCCceEEEEEeeec
Q 011138 145 VGTGSFGVVFQAKCLETGDSVAIKKVLQDK-------RYKNRELQIMRLLNHPNVVSLKHCFFSTTEKDELYLNLVLEYI 217 (492)
Q Consensus 145 lG~G~fg~Vy~~~~~~~g~~vAiK~~~~~~-------~~~~~E~~il~~l~h~nIv~l~~~~~~~~~~~~~~~~lV~E~~ 217 (492)
||+|+||+||+|.+..+|+.||+|++.... .....|+.+++.++|+||++++++| .....+|+||||+
T Consensus 1 lg~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~i~~~~~~~-----~~~~~~~lv~e~~ 75 (280)
T cd05608 1 LGKGGFGEVSACQMRATGKLYACKKLNKKRLKKRKGYEGAMVEKRILAKVHSRFIVSLAYAF-----QTKTDLCLVMTIM 75 (280)
T ss_pred CCCCCceeEEEEEEccCCcEEEEEeeeHHHHhhhHHHHHHHHHHHHHHhCCCCcEeeeeEEE-----cCCCeEEEEEeCC
Confidence 699999999999999999999999985432 2234699999999999999999888 4445689999999
Q ss_pred hhhHHH-HhhhhhhcCCCcCHHHHHHHHHHHHHHHHHHHhhCCcccCCCCCCceEEcCCCCcEEEeeecCccccCCCCC-
Q 011138 218 SETVYR-VSKHYTRMNQHVPILYVQLYTYQICRALNYLHHVVGVCHRDIKPQNLLVNPHTHQLKICDFGSAKMLVPGEP- 295 (492)
Q Consensus 218 ~~~l~~-~~~~~~~~~~~~~~~~~~~i~~qi~~aL~yLH~~~givHrDlKp~NILl~~~~~~vkL~DFG~a~~~~~~~~- 295 (492)
+++.+. .+.........+++..+..++.||+.||.|||+ +||+||||||+||+++.++ .+||+|||++........
T Consensus 76 ~~g~L~~~~~~~~~~~~~l~~~~~~~~~~qi~~~l~~lH~-~~i~H~dlkp~Nili~~~~-~~~l~dfg~~~~~~~~~~~ 153 (280)
T cd05608 76 NGGDLRYHIYNVDEENPGFPEPRACFYTAQIISGLEHLHQ-RRIIYRDLKPENVLLDNDG-NVRISDLGLAVELKDGQSK 153 (280)
T ss_pred CCCCHHHHHHhccccCCCCCHHHHHHHHHHHHHHHHHHHH-CCcccCCCCHHHEEECCCC-CEEEeeCccceecCCCCcc
Confidence 875443 332223344568999999999999999999997 9999999999999999877 799999999976543322
Q ss_pred CccceeccCccCchhhcCCCCCCcchhhHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCCHHHHhhcCCCCcccC
Q 011138 296 NISYICSRYYRAPELIFGATEYTTAIDMWSIGCVLAELLLGQPLFPGESGVDQLVEIIKILGTPTREEIKCMNPNYTEFK 375 (492)
Q Consensus 296 ~~~~~gt~~y~aPE~~~~~~~~~~~~DvwSlGvil~ell~G~~pf~~~~~~~~~~~i~~~~g~p~~~~~~~~~~~~~~~~ 375 (492)
.....||+.|+|||++.+. .++.++|||||||++|+|++|+.||...........+....-. ...
T Consensus 154 ~~~~~g~~~y~aPE~~~~~-~~~~~~DvwslG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~-------------~~~- 218 (280)
T cd05608 154 TKGYAGTPGFMAPELLQGE-EYDFSVDYFALGVTLYEMIAARGPFRARGEKVENKELKQRILN-------------DSV- 218 (280)
T ss_pred ccccCCCcCccCHHHhcCC-CCCccccHHHHHHHHHHHHhCCCCCCCCCcchhHHHHHHhhcc-------------cCC-
Confidence 2345789999999999765 4899999999999999999999999875433222222111000 000
Q ss_pred CCcccCCCcccccCCCCChhHhhhhccccccCCCCcC-----CHHHhhCCCCCCCCCC
Q 011138 376 FPQIKAHPWHKIFHKRMPPEALDLVSRLLQYSPSLRC-----TALEACAHPFFDDLRD 428 (492)
Q Consensus 376 ~~~~~~~~~~~~~~~~~s~~~~~Li~~~L~~dP~~R~-----t~~e~l~Hp~f~~~~~ 428 (492)
.++..+++++.+|+.+||+.||++|+ +++++++||||+++..
T Consensus 219 -----------~~~~~~~~~~~~li~~~l~~~P~~R~~~~~~~~~~~l~h~~~~~~~~ 265 (280)
T cd05608 219 -----------TYPDKFSPASKSFCEALLAKDPEKRLGFRDGNCDGLRTHPLFRDLNW 265 (280)
T ss_pred -----------CCcccCCHHHHHHHHHHhcCCHHHhcCCCCCCHHHHhcChhhhcCCH
Confidence 12345789999999999999999999 8899999999998643
No 95
>cd07832 STKc_CCRK Catalytic domain of the Serine/Threonine Kinase, Cell Cycle-Related Kinase. Serine/Threonine Kinases (STKs), Cell Cycle-Related Kinase (CCRK) p42 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CCRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CCRK was previously called p42. It is a Cyclin-Dependent Kinase (CDK)-Activating Kinase (CAK) which is essential for the activation of CDK2. It is indispensable for cell growth and has been implicated in the progression of glioblastoma multiforme. In the heart, a splice variant of CCRK with a different C-terminal half is expressed, this variant promotes cardiac cell growth and survival and is significantly down-regulated during the development of hea
Probab=100.00 E-value=3.1e-44 Score=351.42 Aligned_cols=276 Identities=39% Similarity=0.733 Sum_probs=227.0
Q ss_pred ceeEeeeeccCCceEEEEEEEcCCCCEEEEEEeccch------hhHHHHHHHHHHcCCCCccccceeeeeccCCCceEEE
Q 011138 138 SYMAERVVGTGSFGVVFQAKCLETGDSVAIKKVLQDK------RYKNRELQIMRLLNHPNVVSLKHCFFSTTEKDELYLN 211 (492)
Q Consensus 138 ~y~~~~~lG~G~fg~Vy~~~~~~~g~~vAiK~~~~~~------~~~~~E~~il~~l~h~nIv~l~~~~~~~~~~~~~~~~ 211 (492)
+|.+.+.||.|+||.||+|.+..+|..||+|++.... ....+|+.+++.++||||+++++++ .+..+++
T Consensus 1 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~vK~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~-----~~~~~~~ 75 (286)
T cd07832 1 RYKILGRIGEGAHGIVFKAKDRETGETVALKKVALRRLEGGIPNQALREIKALQACQHPYVVKLLDVF-----PHGSGFV 75 (286)
T ss_pred CceEEeecccCCCcEEEEEEECCCCceEEEEEEEcccccchhhHHHHHHHHHHHhCCCCCCcceeeEE-----ecCCeeE
Confidence 4899999999999999999999999999999885432 3456799999999999999999988 4455689
Q ss_pred EEeeechhhHHHHhhhhhhcCCCcCHHHHHHHHHHHHHHHHHHHhhCCcccCCCCCCceEEcCCCCcEEEeeecCccccC
Q 011138 212 LVLEYISETVYRVSKHYTRMNQHVPILYVQLYTYQICRALNYLHHVVGVCHRDIKPQNLLVNPHTHQLKICDFGSAKMLV 291 (492)
Q Consensus 212 lV~E~~~~~l~~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~yLH~~~givHrDlKp~NILl~~~~~~vkL~DFG~a~~~~ 291 (492)
+||||+++++...+.. ....+++..++.++.||+.||.|||+ +||+|+||||+||+++.++ .++|+|||++....
T Consensus 76 ~v~e~~~~~L~~~~~~---~~~~~~~~~~~~~~~~i~~~l~~lH~-~~i~H~dl~p~ni~~~~~~-~~~l~dfg~~~~~~ 150 (286)
T cd07832 76 LVMEYMPSDLSEVLRD---EERPLPEAQVKSYMRMLLKGVAYMHA-NGIMHRDLKPANLLISADG-VLKIADFGLARLFS 150 (286)
T ss_pred EEecccCCCHHHHHHh---cCCCCCHHHHHHHHHHHHHHHHHHHH-CCeecCCcCHHHEEEcCCC-cEEEeeeeeccccc
Confidence 9999996666665433 23568999999999999999999997 9999999999999999877 79999999988664
Q ss_pred CCCC--CccceeccCccCchhhcCCCCCCcchhhHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCCHHHHhhcC-
Q 011138 292 PGEP--NISYICSRYYRAPELIFGATEYTTAIDMWSIGCVLAELLLGQPLFPGESGVDQLVEIIKILGTPTREEIKCMN- 368 (492)
Q Consensus 292 ~~~~--~~~~~gt~~y~aPE~~~~~~~~~~~~DvwSlGvil~ell~G~~pf~~~~~~~~~~~i~~~~g~p~~~~~~~~~- 368 (492)
.... .....|+..|+|||++.+...++.++||||+||++|+|++|.+||.+.+....+..+...++.+....+....
T Consensus 151 ~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~~l~~l~tg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 230 (286)
T cd07832 151 EEEPRLYSHQVATRWYRAPELLYGARKYDPGVDLWAVGCIFAELLNGSPLFPGENDIEQLAIVFRTLGTPNEETWPGLTS 230 (286)
T ss_pred CCCCCccccccCcccccCceeeeccccCCchhHHHHHHHHHHHHHcCCcCcCCCCHHHHHHHHHHHcCCCChHHHhhccC
Confidence 4331 3345789999999998776667999999999999999999999999999888999999999988877665432
Q ss_pred -CCCcccCCCcccCCCcccccCCCCChhHhhhhccccccCCCCcCCHHHhhCCCCCC
Q 011138 369 -PNYTEFKFPQIKAHPWHKIFHKRMPPEALDLVSRLLQYSPSLRCTALEACAHPFFD 424 (492)
Q Consensus 369 -~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~Li~~~L~~dP~~R~t~~e~l~Hp~f~ 424 (492)
+.+....++.....++... .+..+.++.+||++||..||++|||+.++++||||.
T Consensus 231 ~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~li~~~l~~~p~~R~~~~~~l~h~~~~ 286 (286)
T cd07832 231 LPDYNKITFPESKPIPLEEI-FPDASPEALDLLKGLLVYDPSKRLSAAEALRHPYFT 286 (286)
T ss_pred cchhhcccCCCCCcchHHHh-CCCccHHHHHHHHHHhccChhhCCCHHHHhhCcCcC
Confidence 2233334443333333222 245679999999999999999999999999999994
No 96
>cd05570 STKc_PKC Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase C. Serine/Threonine Kinases (STKs), Protein Kinase C (PKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, classical PKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. Novel PKCs are calcium-independent, but require DAG and PS for activity, while atypical PKCs only re
Probab=100.00 E-value=1.3e-44 Score=360.46 Aligned_cols=246 Identities=28% Similarity=0.493 Sum_probs=199.6
Q ss_pred eeeccCCceEEEEEEEcCCCCEEEEEEeccch-------hhHHHHHHHHHHc-CCCCccccceeeeeccCCCceEEEEEe
Q 011138 143 RVVGTGSFGVVFQAKCLETGDSVAIKKVLQDK-------RYKNRELQIMRLL-NHPNVVSLKHCFFSTTEKDELYLNLVL 214 (492)
Q Consensus 143 ~~lG~G~fg~Vy~~~~~~~g~~vAiK~~~~~~-------~~~~~E~~il~~l-~h~nIv~l~~~~~~~~~~~~~~~~lV~ 214 (492)
+.||+|+||+||+|.+..+++.||||++.+.. ....+|..+++.+ +||||+++++++ .+..++|+||
T Consensus 1 ~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~il~~~~~h~~i~~~~~~~-----~~~~~~~lv~ 75 (318)
T cd05570 1 KVLGKGSFGKVLLAELKGTDELYAVKVLKKDVILQDDDVECTMTEKRVLALAGKHPFLTQLHSCF-----QTKDRLFFVM 75 (318)
T ss_pred CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHHhhhhHHHHHHHHHHHHHhccCCCCccceeeEE-----EcCCEEEEEE
Confidence 36999999999999999999999999986532 2234688888887 699999999988 4445689999
Q ss_pred eechhhHHHHhhhhhhcCCCcCHHHHHHHHHHHHHHHHHHHhhCCcccCCCCCCceEEcCCCCcEEEeeecCccccC-CC
Q 011138 215 EYISETVYRVSKHYTRMNQHVPILYVQLYTYQICRALNYLHHVVGVCHRDIKPQNLLVNPHTHQLKICDFGSAKMLV-PG 293 (492)
Q Consensus 215 E~~~~~l~~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~yLH~~~givHrDlKp~NILl~~~~~~vkL~DFG~a~~~~-~~ 293 (492)
||+.++.+... ......+++..+..++.||+.||.|||+ +||+||||||+|||++.++ .+||+|||+++... ..
T Consensus 76 e~~~~~~L~~~---~~~~~~l~~~~~~~~~~qi~~~l~~LH~-~~ivH~dlkp~Nill~~~~-~~kl~Dfg~~~~~~~~~ 150 (318)
T cd05570 76 EYVNGGDLMFH---IQRSGRFDEPRARFYAAEIVLGLQFLHE-RGIIYRDLKLDNVLLDSEG-HIKIADFGMCKEGILGG 150 (318)
T ss_pred cCCCCCCHHHH---HHHcCCCCHHHHHHHHHHHHHHHHHHHh-CCeEccCCCHHHeEECCCC-cEEecccCCCeecCcCC
Confidence 99987544321 1223468999999999999999999997 9999999999999999888 79999999986532 22
Q ss_pred CCCccceeccCccCchhhcCCCCCCcchhhHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCCHHHHhhcCCCCcc
Q 011138 294 EPNISYICSRYYRAPELIFGATEYTTAIDMWSIGCVLAELLLGQPLFPGESGVDQLVEIIKILGTPTREEIKCMNPNYTE 373 (492)
Q Consensus 294 ~~~~~~~gt~~y~aPE~~~~~~~~~~~~DvwSlGvil~ell~G~~pf~~~~~~~~~~~i~~~~g~p~~~~~~~~~~~~~~ 373 (492)
......+||+.|+|||++.+. .++.++|||||||++|+|++|..||.+.+.......+.. ..
T Consensus 151 ~~~~~~~g~~~y~aPE~~~~~-~~~~~~DiwslGvil~~l~~G~~pf~~~~~~~~~~~i~~-----------------~~ 212 (318)
T cd05570 151 VTTSTFCGTPDYIAPEILSYQ-PYGPAVDWWALGVLLYEMLAGQSPFEGDDEDELFQSILE-----------------DE 212 (318)
T ss_pred CcccceecCccccCHHHhcCC-CCCcchhhhhHHHHHHHHhhCCCCCCCCCHHHHHHHHHc-----------------CC
Confidence 233446799999999999664 489999999999999999999999988776555444432 01
Q ss_pred cCCCcccCCCcccccCCCCChhHhhhhccccccCCCCcCCH-----HHhhCCCCCCCCCC
Q 011138 374 FKFPQIKAHPWHKIFHKRMPPEALDLVSRLLQYSPSLRCTA-----LEACAHPFFDDLRD 428 (492)
Q Consensus 374 ~~~~~~~~~~~~~~~~~~~s~~~~~Li~~~L~~dP~~R~t~-----~e~l~Hp~f~~~~~ 428 (492)
.. ++..+++++.+||++||+.||.+||++ .++++||||+.+..
T Consensus 213 ~~------------~~~~~~~~~~~li~~~l~~dP~~R~s~~~~~~~~ll~~~~~~~~~~ 260 (318)
T cd05570 213 VR------------YPRWLSKEAKSILKSFLTKNPEKRLGCLPTGEQDIKGHPFFREIDW 260 (318)
T ss_pred CC------------CCCcCCHHHHHHHHHHccCCHHHcCCCCCCCHHHHhcCCCcCCCCH
Confidence 11 223578999999999999999999999 99999999988643
No 97
>cd05584 STKc_p70S6K Catalytic domain of the Protein Serine/Threonine Kinase, 70 kDa ribosomal protein S6 kinase. Serine/Threonine Kinases (STKs), 70 kDa ribosomal protein S6 kinase (p70S6K) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p70S6K subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p70S6K (or S6K) contains only one catalytic kinase domain, unlike p90 ribosomal S6 kinases (RSKs). It acts as a downstream effector of the STK mTOR (mammalian Target of Rapamycin) and plays a role in the regulation of the translation machinery during protein synthesis. p70S6K also plays a pivotal role in regulating cell size and glucose homeostasis. Its targets include S6, the translation initiation factor eIF3, and the in
Probab=100.00 E-value=1.4e-44 Score=361.03 Aligned_cols=244 Identities=31% Similarity=0.515 Sum_probs=198.3
Q ss_pred eeeccCCceEEEEEEEc---CCCCEEEEEEeccch--------hhHHHHHHHHHHcCCCCccccceeeeeccCCCceEEE
Q 011138 143 RVVGTGSFGVVFQAKCL---ETGDSVAIKKVLQDK--------RYKNRELQIMRLLNHPNVVSLKHCFFSTTEKDELYLN 211 (492)
Q Consensus 143 ~~lG~G~fg~Vy~~~~~---~~g~~vAiK~~~~~~--------~~~~~E~~il~~l~h~nIv~l~~~~~~~~~~~~~~~~ 211 (492)
+.||+|+||.||++++. .+++.||||++.... ....+|+.+++.++||||++++++| .....+|
T Consensus 2 ~~lg~G~~g~V~~~~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~~E~~il~~l~hp~iv~~~~~~-----~~~~~~~ 76 (323)
T cd05584 2 KVLGKGGYGKVFQVRKVTGADTGKIFAMKVLKKATIVRNQKDTAHTKAERNILEAVKHPFIVDLIYAF-----QTGGKLY 76 (323)
T ss_pred ceeeecCCeEEEEEEEcccCCCCCEEEEEEEEHHHHHhhhhhHHHHHHHHHHHHhCCCCchhceeeEE-----ecCCeEE
Confidence 57999999999999864 578999999885431 2235799999999999999999988 3444689
Q ss_pred EEeeechhhHH-HHhhhhhhcCCCcCHHHHHHHHHHHHHHHHHHHhhCCcccCCCCCCceEEcCCCCcEEEeeecCcccc
Q 011138 212 LVLEYISETVY-RVSKHYTRMNQHVPILYVQLYTYQICRALNYLHHVVGVCHRDIKPQNLLVNPHTHQLKICDFGSAKML 290 (492)
Q Consensus 212 lV~E~~~~~l~-~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~yLH~~~givHrDlKp~NILl~~~~~~vkL~DFG~a~~~ 290 (492)
+||||+.++.+ ..+. ....+++..+..++.||+.||.|||+ +||+||||||+|||++.++ .+||+|||+++..
T Consensus 77 lv~e~~~~~~L~~~~~----~~~~~~~~~~~~~~~qi~~~l~~lH~-~~ivH~dlkp~Nil~~~~~-~~kl~Dfg~~~~~ 150 (323)
T cd05584 77 LILEYLSGGELFMHLE----REGIFMEDTACFYLSEISLALEHLHQ-QGIIYRDLKPENILLDAQG-HVKLTDFGLCKES 150 (323)
T ss_pred EEEeCCCCchHHHHHH----HcCCCCHHHHHHHHHHHHHHHHHHHH-CCeecCCCCHHHeEECCCC-CEEEeeCcCCeec
Confidence 99999987533 3322 24567888899999999999999997 9999999999999999887 7999999998754
Q ss_pred CC-CCCCccceeccCccCchhhcCCCCCCcchhhHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCCHHHHhhcCC
Q 011138 291 VP-GEPNISYICSRYYRAPELIFGATEYTTAIDMWSIGCVLAELLLGQPLFPGESGVDQLVEIIKILGTPTREEIKCMNP 369 (492)
Q Consensus 291 ~~-~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DvwSlGvil~ell~G~~pf~~~~~~~~~~~i~~~~g~p~~~~~~~~~~ 369 (492)
.. ........||+.|+|||++.+. .++.++|||||||++|||++|+.||.+.+....+..+...
T Consensus 151 ~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~~DiwslG~il~ell~G~~pf~~~~~~~~~~~~~~~-------------- 215 (323)
T cd05584 151 IHEGTVTHTFCGTIEYMAPEILMRS-GHGKAVDWWSLGALMYDMLTGAPPFTAENRKKTIDKILKG-------------- 215 (323)
T ss_pred ccCCCcccccCCCccccChhhccCC-CCCCcceecccHHHHHHHhcCCCCCCCCCHHHHHHHHHcC--------------
Confidence 22 2233346799999999999654 4789999999999999999999999987766655554331
Q ss_pred CCcccCCCcccCCCcccccCCCCChhHhhhhccccccCCCCcC-----CHHHhhCCCCCCCCC
Q 011138 370 NYTEFKFPQIKAHPWHKIFHKRMPPEALDLVSRLLQYSPSLRC-----TALEACAHPFFDDLR 427 (492)
Q Consensus 370 ~~~~~~~~~~~~~~~~~~~~~~~s~~~~~Li~~~L~~dP~~R~-----t~~e~l~Hp~f~~~~ 427 (492)
... ++..+++++.+||.+||+.||++|| ++.++++||||....
T Consensus 216 ---~~~------------~~~~~~~~~~~li~~~l~~~p~~R~~~~~~~~~~l~~h~~~~~~~ 263 (323)
T cd05584 216 ---KLN------------LPPYLTPEARDLLKKLLKRNPSSRLGAGPGDAAEVQSHPFFRHVN 263 (323)
T ss_pred ---CCC------------CCCCCCHHHHHHHHHHcccCHhHcCCCCCCCHHHHhcCCCcCCCC
Confidence 111 2235789999999999999999999 899999999998653
No 98
>KOG0612 consensus Rho-associated, coiled-coil containing protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=7.4e-46 Score=391.70 Aligned_cols=257 Identities=29% Similarity=0.481 Sum_probs=220.1
Q ss_pred cccceeEeeeeccCCceEEEEEEEcCCCCEEEEEEeccc-------hhhHHHHHHHHHHcCCCCccccceeeeeccCCCc
Q 011138 135 QTISYMAERVVGTGSFGVVFQAKCLETGDSVAIKKVLQD-------KRYKNRELQIMRLLNHPNVVSLKHCFFSTTEKDE 207 (492)
Q Consensus 135 ~~~~y~~~~~lG~G~fg~Vy~~~~~~~g~~vAiK~~~~~-------~~~~~~E~~il~~l~h~nIv~l~~~~~~~~~~~~ 207 (492)
...+|.+.++||+|+||.|.+++.+.|++.||+|++.+. ...+..|..||..-+.+=|++++-.| .|.
T Consensus 73 ~~~DfeilKvIGrGaFGEV~lVr~k~t~~VYAMK~lnK~eMlKr~~tA~F~EERDimv~~ns~Wiv~LhyAF-----QD~ 147 (1317)
T KOG0612|consen 73 KAEDFEILKVIGRGAFGEVALVRHKSTEKVYAMKILNKWEMLKRAETACFREERDIMVFGNSEWIVQLHYAF-----QDE 147 (1317)
T ss_pred CHHhhHHHHHhcccccceeEEEEeeccccchhHHHhhHHHHhhchhHHHHHHHhHHHHcCCcHHHHHHHHHh-----cCc
Confidence 345799999999999999999999999999999988653 34456799999998999999999888 889
Q ss_pred eEEEEEeeechh-hHHHHhhhhhhcCCCcCHHHHHHHHHHHHHHHHHHHhhCCcccCCCCCCceEEcCCCCcEEEeeecC
Q 011138 208 LYLNLVLEYISE-TVYRVSKHYTRMNQHVPILYVQLYTYQICRALNYLHHVVGVCHRDIKPQNLLVNPHTHQLKICDFGS 286 (492)
Q Consensus 208 ~~~~lV~E~~~~-~l~~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~yLH~~~givHrDlKp~NILl~~~~~~vkL~DFG~ 286 (492)
.|+|+||||++| +++.++..+ . .+|+..+++|+..|+.||.-||+ .|+|||||||+|||||..| .|||+|||.
T Consensus 148 ~~LYlVMdY~pGGDlltLlSk~---~-~~pE~~ArFY~aEiVlAldslH~-mgyVHRDiKPDNvLld~~G-HikLADFGs 221 (1317)
T KOG0612|consen 148 RYLYLVMDYMPGGDLLTLLSKF---D-RLPEDWARFYTAEIVLALDSLHS-MGYVHRDIKPDNVLLDKSG-HIKLADFGS 221 (1317)
T ss_pred cceEEEEecccCchHHHHHhhc---C-CChHHHHHHHHHHHHHHHHHHHh-ccceeccCCcceeEecccC-cEeeccchh
Confidence 999999999986 455555443 3 79999999999999999999998 8999999999999999999 599999999
Q ss_pred ccccCCCC--CCccceeccCccCchhhc----CCCCCCcchhhHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCC
Q 011138 287 AKMLVPGE--PNISYICSRYYRAPELIF----GATEYTTAIDMWSIGCVLAELLLGQPLFPGESGVDQLVEIIKILGTPT 360 (492)
Q Consensus 287 a~~~~~~~--~~~~~~gt~~y~aPE~~~----~~~~~~~~~DvwSlGvil~ell~G~~pf~~~~~~~~~~~i~~~~g~p~ 360 (492)
+-.+..+. .....+|||.|++||++. +.+.|+..+|+||+||++|||++|..||..++-.+.+.+|+...
T Consensus 222 Clkm~~dG~V~s~~aVGTPDYISPEvLqs~~~~~g~yG~ecDwWSlGV~~YEMlyG~TPFYadslveTY~KIm~hk---- 297 (1317)
T KOG0612|consen 222 CLKMDADGTVRSSVAVGTPDYISPEVLQSQGDGKGEYGRECDWWSLGVFMYEMLYGETPFYADSLVETYGKIMNHK---- 297 (1317)
T ss_pred HHhcCCCCcEEeccccCCCCccCHHHHHhhcCCccccCCccchhhhHHHHHHHHcCCCcchHHHHHHHHHHHhchh----
Confidence 87765333 234679999999999984 22569999999999999999999999999999999999998741
Q ss_pred HHHHhhcCCCCcccCCCcccCCCcccccCCCCChhHhhhhccccccCCCCcCC---HHHhhCCCCCCCCCC
Q 011138 361 REEIKCMNPNYTEFKFPQIKAHPWHKIFHKRMPPEALDLVSRLLQYSPSLRCT---ALEACAHPFFDDLRD 428 (492)
Q Consensus 361 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~Li~~~L~~dP~~R~t---~~e~l~Hp~f~~~~~ 428 (492)
..+.||.. ..+|+++++||+++|. +|+.|.. ++++.+||||.++.+
T Consensus 298 -----------~~l~FP~~----------~~VSeeakdLI~~ll~-~~e~RLgrngiedik~HpFF~g~~W 346 (1317)
T KOG0612|consen 298 -----------ESLSFPDE----------TDVSEEAKDLIEALLC-DREVRLGRNGIEDIKNHPFFEGIDW 346 (1317)
T ss_pred -----------hhcCCCcc----------cccCHHHHHHHHHHhc-ChhhhcccccHHHHHhCccccCCCh
Confidence 34566631 2489999999999875 6888988 999999999998665
No 99
>cd05588 STKc_aPKC Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C. Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. They contain a C2-like region, instead of a calcium-binding (C2) region found in classical PKCs, in their regulatory domain. There are two aPKC isoforms, zeta and iota. aPKCs are involved in many cellular functions incl
Probab=100.00 E-value=1.4e-44 Score=361.97 Aligned_cols=246 Identities=26% Similarity=0.485 Sum_probs=195.7
Q ss_pred eeeccCCceEEEEEEEcCCCCEEEEEEeccch-------hhHHHHHHHHHHc-CCCCccccceeeeeccCCCceEEEEEe
Q 011138 143 RVVGTGSFGVVFQAKCLETGDSVAIKKVLQDK-------RYKNRELQIMRLL-NHPNVVSLKHCFFSTTEKDELYLNLVL 214 (492)
Q Consensus 143 ~~lG~G~fg~Vy~~~~~~~g~~vAiK~~~~~~-------~~~~~E~~il~~l-~h~nIv~l~~~~~~~~~~~~~~~~lV~ 214 (492)
++||+|+||.||+|.+..+++.||||++.+.. ....+|..+++.+ +||||++++++| .+..++|+||
T Consensus 1 ~~lG~G~~g~V~~~~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~e~~il~~~~~hp~Iv~~~~~~-----~~~~~~~lv~ 75 (329)
T cd05588 1 RVIGRGSYAKVLLVELKKTRRIYAMKVIKKELVNDDEDIDWVQTEKHVFETASNHPFLVGLHSCF-----QTESRLFFVI 75 (329)
T ss_pred CeEeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhccCCCCCCceEEEE-----EcCCEEEEEE
Confidence 46999999999999999999999999986431 2345788999888 699999999988 4455789999
Q ss_pred eechhhHH-HHhhhhhhcCCCcCHHHHHHHHHHHHHHHHHHHhhCCcccCCCCCCceEEcCCCCcEEEeeecCcccc-CC
Q 011138 215 EYISETVY-RVSKHYTRMNQHVPILYVQLYTYQICRALNYLHHVVGVCHRDIKPQNLLVNPHTHQLKICDFGSAKML-VP 292 (492)
Q Consensus 215 E~~~~~l~-~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~yLH~~~givHrDlKp~NILl~~~~~~vkL~DFG~a~~~-~~ 292 (492)
||++++.+ ..+. ....+++..++.++.||+.||.|||+ +||+||||||+|||++.++ .+||+|||+++.. ..
T Consensus 76 e~~~~g~L~~~~~----~~~~l~~~~~~~~~~qi~~~l~~lH~-~~ivH~dlkp~Nili~~~~-~~kL~Dfg~~~~~~~~ 149 (329)
T cd05588 76 EFVSGGDLMFHMQ----RQRKLPEEHARFYSAEISLALNFLHE-RGIIYRDLKLDNVLLDAEG-HIKLTDYGMCKEGIRP 149 (329)
T ss_pred eCCCCCCHHHHHH----HcCCCCHHHHHHHHHHHHHHHHHHHH-CCeEecCCCHHHeEECCCC-CEEECcCccccccccC
Confidence 99987543 3222 24578999999999999999999997 9999999999999999887 7999999998753 22
Q ss_pred CCCCccceeccCccCchhhcCCCCCCcchhhHHHHHHHHHHHhCCCCCCCCCh--------HHHHHHHHHHhCCCCHHHH
Q 011138 293 GEPNISYICSRYYRAPELIFGATEYTTAIDMWSIGCVLAELLLGQPLFPGESG--------VDQLVEIIKILGTPTREEI 364 (492)
Q Consensus 293 ~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DvwSlGvil~ell~G~~pf~~~~~--------~~~~~~i~~~~g~p~~~~~ 364 (492)
.......+||+.|+|||++.+. .++.++|+|||||++|+|++|+.||..... .+.+.+.+..
T Consensus 150 ~~~~~~~~gt~~y~aPE~~~~~-~~~~~~DiwslG~~l~el~~g~~Pf~~~~~~~~~~~~~~~~~~~~~~~--------- 219 (329)
T cd05588 150 GDTTSTFCGTPNYIAPEILRGE-DYGFSVDWWALGVLMFEMMAGRSPFDIVGMSDNPDQNTEDYLFQVILE--------- 219 (329)
T ss_pred CCccccccCCccccCHHHHcCC-CCCCccceechHHHHHHHHHCCCCcccccccccccccchHHHHHHHHc---------
Confidence 3334457899999999999764 489999999999999999999999964221 1111111110
Q ss_pred hhcCCCCcccCCCcccCCCcccccCCCCChhHhhhhccccccCCCCcCC------HHHhhCCCCCCCCCC
Q 011138 365 KCMNPNYTEFKFPQIKAHPWHKIFHKRMPPEALDLVSRLLQYSPSLRCT------ALEACAHPFFDDLRD 428 (492)
Q Consensus 365 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~Li~~~L~~dP~~R~t------~~e~l~Hp~f~~~~~ 428 (492)
.... ++..++.++.+||++||+.||.+|++ +.++++||||..+..
T Consensus 220 -------~~~~------------~p~~~~~~~~~li~~~L~~dP~~R~~~~~~~~~~~i~~hp~~~~~~~ 270 (329)
T cd05588 220 -------KQIR------------IPRSLSVKASSVLKGFLNKDPKERLGCHPQTGFRDIKSHPFFRNIDW 270 (329)
T ss_pred -------CCCC------------CCCCCCHHHHHHHHHHhccCHHHcCCCCCCCCHHHHhcCCCCCCCCH
Confidence 0111 22357899999999999999999997 789999999987543
No 100
>cd05620 STKc_nPKC_delta Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C delta. Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), delta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-delta plays a role in cell cycle regulation and programmed cell death in many cell types. I
Probab=100.00 E-value=1.8e-44 Score=359.19 Aligned_cols=244 Identities=27% Similarity=0.467 Sum_probs=196.4
Q ss_pred eeeccCCceEEEEEEEcCCCCEEEEEEeccch-------hhHHHHHHHHHH-cCCCCccccceeeeeccCCCceEEEEEe
Q 011138 143 RVVGTGSFGVVFQAKCLETGDSVAIKKVLQDK-------RYKNRELQIMRL-LNHPNVVSLKHCFFSTTEKDELYLNLVL 214 (492)
Q Consensus 143 ~~lG~G~fg~Vy~~~~~~~g~~vAiK~~~~~~-------~~~~~E~~il~~-l~h~nIv~l~~~~~~~~~~~~~~~~lV~ 214 (492)
+.||+|+||.||+|.+..+|+.||+|++.... .....|..++.. ++||||++++++| .+..++|+||
T Consensus 1 ~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~i~~~~~~~-----~~~~~~~lv~ 75 (316)
T cd05620 1 KVLGKGSFGKVLLAELKGKGEYFAVKALKKDVVLIDDDVECTMVEKRVLALAWENPFLTHLYCTF-----QTKEHLFFVM 75 (316)
T ss_pred CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhcchHHHHHHHHHHHHhccCCCCccCeeEEE-----EeCCEEEEEE
Confidence 36999999999999999999999999986432 223457777765 4899999999988 4455799999
Q ss_pred eechhhHH-HHhhhhhhcCCCcCHHHHHHHHHHHHHHHHHHHhhCCcccCCCCCCceEEcCCCCcEEEeeecCccccCC-
Q 011138 215 EYISETVY-RVSKHYTRMNQHVPILYVQLYTYQICRALNYLHHVVGVCHRDIKPQNLLVNPHTHQLKICDFGSAKMLVP- 292 (492)
Q Consensus 215 E~~~~~l~-~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~yLH~~~givHrDlKp~NILl~~~~~~vkL~DFG~a~~~~~- 292 (492)
||+.++.+ ..+. ....+++..+..++.||+.||+|||+ +||+||||||+|||++.++ .+||+|||+++....
T Consensus 76 E~~~~g~L~~~i~----~~~~~~~~~~~~~~~qi~~~l~~lH~-~~ivHrDlkp~Nil~~~~~-~~kl~Dfg~~~~~~~~ 149 (316)
T cd05620 76 EFLNGGDLMFHIQ----DKGRFDLYRATFYAAEIVCGLQFLHS-KGIIYRDLKLDNVMLDRDG-HIKIADFGMCKENVFG 149 (316)
T ss_pred CCCCCCcHHHHHH----HcCCCCHHHHHHHHHHHHHHHHHHHH-CCeEecCCCHHHeEECCCC-CEEeCccCCCeecccC
Confidence 99986533 3322 24568899999999999999999997 9999999999999999887 799999999875322
Q ss_pred CCCCccceeccCccCchhhcCCCCCCcchhhHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCCHHHHhhcCCCCc
Q 011138 293 GEPNISYICSRYYRAPELIFGATEYTTAIDMWSIGCVLAELLLGQPLFPGESGVDQLVEIIKILGTPTREEIKCMNPNYT 372 (492)
Q Consensus 293 ~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DvwSlGvil~ell~G~~pf~~~~~~~~~~~i~~~~g~p~~~~~~~~~~~~~ 372 (492)
.......+||+.|+|||++.+. .++.++|||||||++|+|++|..||.+.+..+....+.. +
T Consensus 150 ~~~~~~~~gt~~y~aPE~~~~~-~~~~~~DiwslGvil~el~~g~~Pf~~~~~~~~~~~~~~--~--------------- 211 (316)
T cd05620 150 DNRASTFCGTPDYIAPEILQGL-KYTFSVDWWSFGVLLYEMLIGQSPFHGDDEDELFESIRV--D--------------- 211 (316)
T ss_pred CCceeccCCCcCccCHHHHcCC-CCCcccchhhhHHHHHHHHhCCCCCCCCCHHHHHHHHHh--C---------------
Confidence 2233456799999999999755 489999999999999999999999988776554443322 0
Q ss_pred ccCCCcccCCCcccccCCCCChhHhhhhccccccCCCCcCCH-HHhhCCCCCCCCC
Q 011138 373 EFKFPQIKAHPWHKIFHKRMPPEALDLVSRLLQYSPSLRCTA-LEACAHPFFDDLR 427 (492)
Q Consensus 373 ~~~~~~~~~~~~~~~~~~~~s~~~~~Li~~~L~~dP~~R~t~-~e~l~Hp~f~~~~ 427 (492)
... ++..++.++++||.+||+.||.+|+++ +++++||||+...
T Consensus 212 ~~~------------~~~~~~~~~~~li~~~l~~dP~~R~~~~~~~~~h~~f~~~~ 255 (316)
T cd05620 212 TPH------------YPRWITKESKDILEKLFERDPTRRLGVVGNIRGHPFFKTIN 255 (316)
T ss_pred CCC------------CCCCCCHHHHHHHHHHccCCHHHcCCChHHHHcCCCcCCCC
Confidence 001 123478999999999999999999998 5899999998764
No 101
>cd05627 STKc_NDR2 Catalytic domain of the Protein Serine/Threonine Kinase, Nuclear Dbf2-Related kinase 2. Serine/Threonine Kinases (STKs), NDR kinase subfamily, NDR2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. Higher eukaryotes contain two NDR isoforms, NDR1 and NDR2. Both isoforms play a role in proper centrosome duplication. In addition, NDR2 plays a role in regul
Probab=100.00 E-value=1.1e-44 Score=367.18 Aligned_cols=253 Identities=26% Similarity=0.428 Sum_probs=204.0
Q ss_pred ceeEeeeeccCCceEEEEEEEcCCCCEEEEEEeccch-------hhHHHHHHHHHHcCCCCccccceeeeeccCCCceEE
Q 011138 138 SYMAERVVGTGSFGVVFQAKCLETGDSVAIKKVLQDK-------RYKNRELQIMRLLNHPNVVSLKHCFFSTTEKDELYL 210 (492)
Q Consensus 138 ~y~~~~~lG~G~fg~Vy~~~~~~~g~~vAiK~~~~~~-------~~~~~E~~il~~l~h~nIv~l~~~~~~~~~~~~~~~ 210 (492)
+|.+.+.||+|+||.||+|.+..+|+.||||++.... ....+|+.++..++||||+++++.| .+..++
T Consensus 2 ~f~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~iv~~~~~~-----~~~~~~ 76 (360)
T cd05627 2 DFESLKVIGRGAFGEVRLVQKKDTGHIYAMKILRKADMLEKEQVAHIRAERDILVEADGAWVVKMFYSF-----QDKRNL 76 (360)
T ss_pred CceEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEHHHHhhhhhHHHHHHHHHHHHhCCCCCEeeEEEEE-----EcCCEE
Confidence 5899999999999999999999999999999985421 2345799999999999999999988 455578
Q ss_pred EEEeeechhh-HHHHhhhhhhcCCCcCHHHHHHHHHHHHHHHHHHHhhCCcccCCCCCCceEEcCCCCcEEEeeecCccc
Q 011138 211 NLVLEYISET-VYRVSKHYTRMNQHVPILYVQLYTYQICRALNYLHHVVGVCHRDIKPQNLLVNPHTHQLKICDFGSAKM 289 (492)
Q Consensus 211 ~lV~E~~~~~-l~~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~yLH~~~givHrDlKp~NILl~~~~~~vkL~DFG~a~~ 289 (492)
|+||||++++ +...+. ....+++..++.++.||+.||.|||+ +||+||||||+|||++.++ .+||+|||+++.
T Consensus 77 ~lv~E~~~gg~L~~~l~----~~~~l~~~~~~~~~~qi~~~L~~lH~-~givHrDLkp~NIli~~~~-~vkL~DfG~~~~ 150 (360)
T cd05627 77 YLIMEFLPGGDMMTLLM----KKDTLSEEATQFYIAETVLAIDAIHQ-LGFIHRDIKPDNLLLDAKG-HVKLSDFGLCTG 150 (360)
T ss_pred EEEEeCCCCccHHHHHH----hcCCCCHHHHHHHHHHHHHHHHHHHH-CCeEccCCCHHHEEECCCC-CEEEeeccCCcc
Confidence 9999999865 444332 24568999999999999999999997 9999999999999999887 799999999865
Q ss_pred cCCCC------------------------------------CCccceeccCccCchhhcCCCCCCcchhhHHHHHHHHHH
Q 011138 290 LVPGE------------------------------------PNISYICSRYYRAPELIFGATEYTTAIDMWSIGCVLAEL 333 (492)
Q Consensus 290 ~~~~~------------------------------------~~~~~~gt~~y~aPE~~~~~~~~~~~~DvwSlGvil~el 333 (492)
..... .....+||+.|+|||++.+. .++.++|||||||++|||
T Consensus 151 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~-~~~~~~DiwSlGvilyel 229 (360)
T cd05627 151 LKKAHRTEFYRNLTHNPPSDFSFQNMNSKRKAETWKKNRRQLAYSTVGTPDYIAPEVFMQT-GYNKLCDWWSLGVIMYEM 229 (360)
T ss_pred cccccccccccccccCCcccccccccccccccccccccccccccccCCCccccCHHHHcCC-CCCCcceeccccceeeec
Confidence 42110 01245799999999999765 489999999999999999
Q ss_pred HhCCCCCCCCChHHHHHHHHHHhCCCCHHHHhhcCCCCcccCCCcccCCCcccccCCCCChhHhhhhccccccCCCCcCC
Q 011138 334 LLGQPLFPGESGVDQLVEIIKILGTPTREEIKCMNPNYTEFKFPQIKAHPWHKIFHKRMPPEALDLVSRLLQYSPSLRCT 413 (492)
Q Consensus 334 l~G~~pf~~~~~~~~~~~i~~~~g~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~Li~~~L~~dP~~R~t 413 (492)
++|.+||.+.+..+.+..+.... ....+|.. ..+++++++||.+|+. ||.+|++
T Consensus 230 ~tG~~Pf~~~~~~~~~~~i~~~~---------------~~~~~p~~----------~~~s~~~~~li~~l~~-~p~~R~~ 283 (360)
T cd05627 230 LIGYPPFCSETPQETYRKVMNWK---------------ETLVFPPE----------VPISEKAKDLILRFCT-DSENRIG 283 (360)
T ss_pred ccCCCCCCCCCHHHHHHHHHcCC---------------CceecCCC----------CCCCHHHHHHHHHhcc-ChhhcCC
Confidence 99999999887766655554310 01112210 1368899999999874 9999984
Q ss_pred ---HHHhhCCCCCCCCCC
Q 011138 414 ---ALEACAHPFFDDLRD 428 (492)
Q Consensus 414 ---~~e~l~Hp~f~~~~~ 428 (492)
+.++++||||+++..
T Consensus 284 ~~~~~ei~~hp~f~~~~~ 301 (360)
T cd05627 284 SNGVEEIKSHPFFEGVDW 301 (360)
T ss_pred CCCHHHHhcCCCCCCCCH
Confidence 799999999998653
No 102
>cd05597 STKc_DMPK_like Catalytic domain of Myotonic Dystrophy protein kinase-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Myotonic Dystrophy protein kinase (DMPK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The DMPK-like subfamily is composed of DMPK and DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK). Three isoforms of MRCK are known, named alpha, beta and gamma. The DMPK gene is implicated in myotonic dystrophy 1 (DM1), an inherited multisystemic disorder with symptoms that include muscle hyperexcitability, progressive muscle weakness and wasting, cataract development, testicular atrophy,
Probab=100.00 E-value=4.5e-44 Score=358.58 Aligned_cols=257 Identities=26% Similarity=0.441 Sum_probs=204.5
Q ss_pred ceeEeeeeccCCceEEEEEEEcCCCCEEEEEEeccc-------hhhHHHHHHHHHHcCCCCccccceeeeeccCCCceEE
Q 011138 138 SYMAERVVGTGSFGVVFQAKCLETGDSVAIKKVLQD-------KRYKNRELQIMRLLNHPNVVSLKHCFFSTTEKDELYL 210 (492)
Q Consensus 138 ~y~~~~~lG~G~fg~Vy~~~~~~~g~~vAiK~~~~~-------~~~~~~E~~il~~l~h~nIv~l~~~~~~~~~~~~~~~ 210 (492)
+|.+.+.||+|+||.||++++..+++.||||++.+. ...+.+|+.+++.++|+||++++++| .+..++
T Consensus 2 ~y~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~-----~~~~~~ 76 (331)
T cd05597 2 DFEILKVIGRGAFGEVAVVKMKNTGQVYAMKILNKWEMLKRAETACFREERDVLVNGDRRWITNLHYAF-----QDENNL 76 (331)
T ss_pred CceEEEEEEecCCeEEEEEEECCCCCEEEEEEEEHHHHhhhhhHHHHHHHHHHHHhCCCCCCCceEEEE-----ecCCeE
Confidence 599999999999999999999999999999998542 12345789999999999999999988 445579
Q ss_pred EEEeeechhh-HHHHhhhhhhcCCCcCHHHHHHHHHHHHHHHHHHHhhCCcccCCCCCCceEEcCCCCcEEEeeecCccc
Q 011138 211 NLVLEYISET-VYRVSKHYTRMNQHVPILYVQLYTYQICRALNYLHHVVGVCHRDIKPQNLLVNPHTHQLKICDFGSAKM 289 (492)
Q Consensus 211 ~lV~E~~~~~-l~~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~yLH~~~givHrDlKp~NILl~~~~~~vkL~DFG~a~~ 289 (492)
|+||||+.++ |..++. .....+++..++.++.||+.||+|||+ +||+||||||+|||++.++ .+||+|||++..
T Consensus 77 ~lv~e~~~g~~L~~~l~---~~~~~~~~~~~~~~~~qi~~~l~~lH~-~~ivH~dlkp~Nill~~~~-~~kl~Dfg~~~~ 151 (331)
T cd05597 77 YLVMDYYVGGDLLTLLS---KFEDRLPEDMARFYLAEMVLAIDSVHQ-LGYVHRDIKPDNVLLDKNG-HIRLADFGSCLR 151 (331)
T ss_pred EEEEecCCCCcHHHHHH---HhcCCCCHHHHHHHHHHHHHHHHHHHh-CCeEECCCCHHHEEECCCC-CEEEEECCceee
Confidence 9999999764 444432 224568899999999999999999997 9999999999999999887 799999999876
Q ss_pred cCCCCC--CccceeccCccCchhhcC----CCCCCcchhhHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCCHHH
Q 011138 290 LVPGEP--NISYICSRYYRAPELIFG----ATEYTTAIDMWSIGCVLAELLLGQPLFPGESGVDQLVEIIKILGTPTREE 363 (492)
Q Consensus 290 ~~~~~~--~~~~~gt~~y~aPE~~~~----~~~~~~~~DvwSlGvil~ell~G~~pf~~~~~~~~~~~i~~~~g~p~~~~ 363 (492)
...... .....||+.|+|||++.+ ...++.++|||||||++|+|++|+.||.+.+..+.+..+....
T Consensus 152 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DiwslG~~l~el~~g~~Pf~~~~~~~~~~~i~~~~------- 224 (331)
T cd05597 152 LLADGTVQSNVAVGTPDYISPEILQAMEDGKGRYGPECDWWSLGVCMYEMLYGETPFYAESLVETYGKIMNHK------- 224 (331)
T ss_pred cCCCCCccccceeccccccCHHHHhhccccccCCCCcceeehhhhHHHHHhhCCCCCCCCCHHHHHHHHHcCC-------
Confidence 543322 123578999999999863 3457889999999999999999999998877666655554311
Q ss_pred HhhcCCCCcccCCCcccCCCcccccCCCCChhHhhhhccccccCCCC--cCCHHHhhCCCCCCCCCC
Q 011138 364 IKCMNPNYTEFKFPQIKAHPWHKIFHKRMPPEALDLVSRLLQYSPSL--RCTALEACAHPFFDDLRD 428 (492)
Q Consensus 364 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~Li~~~L~~dP~~--R~t~~e~l~Hp~f~~~~~ 428 (492)
..+.++. ....+++++++||++||..++.+ |+++.++++||||.++..
T Consensus 225 --------~~~~~~~---------~~~~~~~~~~~li~~ll~~~~~r~~r~~~~~~l~hp~~~~~~~ 274 (331)
T cd05597 225 --------EHFQFPP---------DVTDVSEEAKDLIRRLICSPETRLGRNGLQDFKDHPFFEGIDW 274 (331)
T ss_pred --------CcccCCC---------ccCCCCHHHHHHHHHHccCcccccCCCCHHHHhcCCCCCCCCH
Confidence 0111111 11247899999999999765444 789999999999987653
No 103
>cd05616 STKc_cPKC_beta Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C beta. Serine/Threonine Kinases (STKs), Classical Protein Kinase C (cPKC) subfamily, beta isoforms, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. There are four cPKC isoforms, named alpha, betaI, betaII, and
Probab=100.00 E-value=2.3e-44 Score=359.50 Aligned_cols=249 Identities=27% Similarity=0.428 Sum_probs=202.6
Q ss_pred ceeEeeeeccCCceEEEEEEEcCCCCEEEEEEeccch-------hhHHHHHHHHHHc-CCCCccccceeeeeccCCCceE
Q 011138 138 SYMAERVVGTGSFGVVFQAKCLETGDSVAIKKVLQDK-------RYKNRELQIMRLL-NHPNVVSLKHCFFSTTEKDELY 209 (492)
Q Consensus 138 ~y~~~~~lG~G~fg~Vy~~~~~~~g~~vAiK~~~~~~-------~~~~~E~~il~~l-~h~nIv~l~~~~~~~~~~~~~~ 209 (492)
+|.+.+.||+|+||.||+|.+..+++.||||++.+.. .....|..++..+ +|++|+++++++ .+..+
T Consensus 1 df~~~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~i~~~~~~~-----~~~~~ 75 (323)
T cd05616 1 DFNFLMVLGKGSFGKVMLAERKGTDELYAIKILKKDVVIQDDDVECTMVEKRVLALSGKPPFLTQLHSCF-----QTMDR 75 (323)
T ss_pred CceEEEEEeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhccCCCeEeeEEEEE-----ecCCE
Confidence 4889999999999999999999999999999886432 1233577777776 488999998888 44456
Q ss_pred EEEEeeechhh-HHHHhhhhhhcCCCcCHHHHHHHHHHHHHHHHHHHhhCCcccCCCCCCceEEcCCCCcEEEeeecCcc
Q 011138 210 LNLVLEYISET-VYRVSKHYTRMNQHVPILYVQLYTYQICRALNYLHHVVGVCHRDIKPQNLLVNPHTHQLKICDFGSAK 288 (492)
Q Consensus 210 ~~lV~E~~~~~-l~~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~yLH~~~givHrDlKp~NILl~~~~~~vkL~DFG~a~ 288 (492)
+|+||||++++ +...+. ....+++..+..++.||+.||.|||+ +||+||||||+|||++.++ .+||+|||+++
T Consensus 76 ~~lv~E~~~~g~L~~~~~----~~~~~~~~~~~~~~~qi~~aL~~LH~-~~ivHrDlkp~Nill~~~~-~~kL~DfG~~~ 149 (323)
T cd05616 76 LYFVMEYVNGGDLMYQIQ----QVGRFKEPHAVFYAAEIAIGLFFLHS-KGIIYRDLKLDNVMLDSEG-HIKIADFGMCK 149 (323)
T ss_pred EEEEEcCCCCCCHHHHHH----HcCCCCHHHHHHHHHHHHHHHHHHHH-CCEEecCCCHHHeEECCCC-cEEEccCCCce
Confidence 89999999865 433322 23568889999999999999999997 9999999999999999888 79999999987
Q ss_pred ccCC-CCCCccceeccCccCchhhcCCCCCCcchhhHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCCHHHHhhc
Q 011138 289 MLVP-GEPNISYICSRYYRAPELIFGATEYTTAIDMWSIGCVLAELLLGQPLFPGESGVDQLVEIIKILGTPTREEIKCM 367 (492)
Q Consensus 289 ~~~~-~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DvwSlGvil~ell~G~~pf~~~~~~~~~~~i~~~~g~p~~~~~~~~ 367 (492)
.... .......+||+.|+|||++.+. .++.++|||||||++|||++|+.||.+.+..+.+..+...
T Consensus 150 ~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~~DiwSlGvil~elltg~~Pf~~~~~~~~~~~i~~~------------ 216 (323)
T cd05616 150 ENMWDGVTTKTFCGTPDYIAPEIIAYQ-PYGKSVDWWAFGVLLYEMLAGQAPFEGEDEDELFQSIMEH------------ 216 (323)
T ss_pred ecCCCCCccccCCCChhhcCHHHhcCC-CCCCccchhchhHHHHHHHhCCCCCCCCCHHHHHHHHHhC------------
Confidence 5432 2233456799999999999654 4899999999999999999999999988776666555431
Q ss_pred CCCCcccCCCcccCCCcccccCCCCChhHhhhhccccccCCCCcCCH-----HHhhCCCCCCCCC
Q 011138 368 NPNYTEFKFPQIKAHPWHKIFHKRMPPEALDLVSRLLQYSPSLRCTA-----LEACAHPFFDDLR 427 (492)
Q Consensus 368 ~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~Li~~~L~~dP~~R~t~-----~e~l~Hp~f~~~~ 427 (492)
... ++..+++++.+||.+||+.||.+|++. .++++||||+.+.
T Consensus 217 -----~~~------------~p~~~s~~~~~li~~~l~~~p~~R~~~~~~~~~~i~~h~~~~~~~ 264 (323)
T cd05616 217 -----NVA------------YPKSMSKEAVAICKGLMTKHPGKRLGCGPEGERDIKEHAFFRYID 264 (323)
T ss_pred -----CCC------------CCCcCCHHHHHHHHHHcccCHHhcCCCCCCCHHHHhcCCCcCCCC
Confidence 111 223578999999999999999999984 8999999998765
No 104
>cd05622 STKc_ROCK1 Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase 1. Serine/Threonine Kinases (STKs), ROCK subfamily, ROCK1 (or ROK-beta) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK contains an N-terminal extension, a catalytic kinase domain, and a C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain, and is activated via interaction with Rho GTPases. ROCK1 is preferentially expressed in the liver, lung, spleen, testes, an
Probab=100.00 E-value=2.5e-44 Score=365.80 Aligned_cols=256 Identities=29% Similarity=0.460 Sum_probs=206.0
Q ss_pred cccceeEeeeeccCCceEEEEEEEcCCCCEEEEEEeccc-------hhhHHHHHHHHHHcCCCCccccceeeeeccCCCc
Q 011138 135 QTISYMAERVVGTGSFGVVFQAKCLETGDSVAIKKVLQD-------KRYKNRELQIMRLLNHPNVVSLKHCFFSTTEKDE 207 (492)
Q Consensus 135 ~~~~y~~~~~lG~G~fg~Vy~~~~~~~g~~vAiK~~~~~-------~~~~~~E~~il~~l~h~nIv~l~~~~~~~~~~~~ 207 (492)
...+|.+.+.||+|+||.||+|.+..+++.||+|++.+. .....+|+.+++.++||||+++++++ .+.
T Consensus 41 ~~~~y~i~~~lG~G~fg~Vy~~~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~e~~i~~~~~hp~iv~~~~~~-----~~~ 115 (371)
T cd05622 41 KAEDYEVVKVIGRGAFGEVQLVRHKSTRKVYAMKLLSKFEMIKRSDSAFFWEERDIMAFANSPWVVQLFYAF-----QDD 115 (371)
T ss_pred chhhcEEEEEEeecCCeEEEEEEECCCCcEEEEEEEEHHHhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEE-----EcC
Confidence 345799999999999999999999999999999988532 22345799999999999999999988 445
Q ss_pred eEEEEEeeechhh-HHHHhhhhhhcCCCcCHHHHHHHHHHHHHHHHHHHhhCCcccCCCCCCceEEcCCCCcEEEeeecC
Q 011138 208 LYLNLVLEYISET-VYRVSKHYTRMNQHVPILYVQLYTYQICRALNYLHHVVGVCHRDIKPQNLLVNPHTHQLKICDFGS 286 (492)
Q Consensus 208 ~~~~lV~E~~~~~-l~~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~yLH~~~givHrDlKp~NILl~~~~~~vkL~DFG~ 286 (492)
.++|+||||++++ |..++. ...+++..++.++.||+.||.|||+ +||+||||||+|||++.++ .+||+|||+
T Consensus 116 ~~~~lv~Ey~~gg~L~~~~~-----~~~~~~~~~~~~~~qi~~aL~~LH~-~~ivHrDLkp~NIll~~~~-~ikL~DfG~ 188 (371)
T cd05622 116 RYLYMVMEYMPGGDLVNLMS-----NYDVPEKWARFYTAEVVLALDAIHS-MGFIHRDVKPDNMLLDKSG-HLKLADFGT 188 (371)
T ss_pred CEEEEEEcCCCCCcHHHHHH-----hcCCCHHHHHHHHHHHHHHHHHHHH-CCEEeCCCCHHHEEECCCC-CEEEEeCCc
Confidence 5799999999865 444332 2357888999999999999999997 9999999999999999887 799999999
Q ss_pred ccccCCCC--CCccceeccCccCchhhcCCC---CCCcchhhHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCCH
Q 011138 287 AKMLVPGE--PNISYICSRYYRAPELIFGAT---EYTTAIDMWSIGCVLAELLLGQPLFPGESGVDQLVEIIKILGTPTR 361 (492)
Q Consensus 287 a~~~~~~~--~~~~~~gt~~y~aPE~~~~~~---~~~~~~DvwSlGvil~ell~G~~pf~~~~~~~~~~~i~~~~g~p~~ 361 (492)
+....... .....+||+.|+|||++.+.. .++.++|||||||++|||++|.+||.+.+....+.+|.....
T Consensus 189 a~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~~~~~DiwSlGvilyell~G~~Pf~~~~~~~~~~~i~~~~~---- 264 (371)
T cd05622 189 CMKMNKEGMVRCDTAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLYEMLVGDTPFYADSLVGTYSKIMNHKN---- 264 (371)
T ss_pred eeEcCcCCcccccCcccCccccCHHHHhccCCCccCCCccceeehhHHHHHHHhCCCCCCCCCHHHHHHHHHcCCC----
Confidence 98664322 223567999999999986532 378999999999999999999999998877666666543110
Q ss_pred HHHhhcCCCCcccCCCcccCCCcccccCCCCChhHhhhhccccccCCCC--cCCHHHhhCCCCCCCCC
Q 011138 362 EEIKCMNPNYTEFKFPQIKAHPWHKIFHKRMPPEALDLVSRLLQYSPSL--RCTALEACAHPFFDDLR 427 (492)
Q Consensus 362 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~Li~~~L~~dP~~--R~t~~e~l~Hp~f~~~~ 427 (492)
...+|. ...+++++++||.+||..++.+ |+++.++++||||++..
T Consensus 265 -----------~~~~~~----------~~~~s~~~~~li~~~L~~~~~r~~r~~~~ei~~h~~~~~~~ 311 (371)
T cd05622 265 -----------SLTFPD----------DNDISKEAKNLICAFLTDREVRLGRNGVEEIKRHLFFKNDQ 311 (371)
T ss_pred -----------cccCCC----------cCCCCHHHHHHHHHHcCChhhhcCCCCHHHHhcCcccCCCC
Confidence 111221 1357899999999999844443 78999999999998743
No 105
>KOG0589 consensus Serine/threonine protein kinase [General function prediction only]
Probab=100.00 E-value=2.2e-45 Score=363.98 Aligned_cols=254 Identities=29% Similarity=0.456 Sum_probs=220.7
Q ss_pred cceeEeeeeccCCceEEEEEEEcCCCCEEEEEEeccc------hhhHHHHHHHHHHcCCCCccccceeeeeccCCCceEE
Q 011138 137 ISYMAERVVGTGSFGVVFQAKCLETGDSVAIKKVLQD------KRYKNRELQIMRLLNHPNVVSLKHCFFSTTEKDELYL 210 (492)
Q Consensus 137 ~~y~~~~~lG~G~fg~Vy~~~~~~~g~~vAiK~~~~~------~~~~~~E~~il~~l~h~nIv~l~~~~~~~~~~~~~~~ 210 (492)
.+|..++.+|+|+||.+++++.+.++..|++|++.-. ++...+|+.+++++.|||||.+++.|+ .+..++
T Consensus 4 ~~Ye~~~~iG~GafG~a~lvrhk~~~~~~vlK~I~l~~~t~~~r~~A~~E~~lis~~~hP~iv~y~ds~~----~~~~~l 79 (426)
T KOG0589|consen 4 DNYEVLRQVGRGAFGSALLVRHKSDDKLYVLKKINLEKLTEPERRSAIQEMDLLSKLLHPNIVEYKDSFE----EDGQLL 79 (426)
T ss_pred chhhhhhhcCccccchhhhhhhccCCceEEEEEEeccccCchhhHHHHHHHHHHHhccCCCeeeeccchh----cCCceE
Confidence 4699999999999999999999999999999998533 234568999999999999999999984 445569
Q ss_pred EEEeeechhhHH-HHhhhhhhcCCCcCHHHHHHHHHHHHHHHHHHHhhCCcccCCCCCCceEEcCCCCcEEEeeecCccc
Q 011138 211 NLVLEYISETVY-RVSKHYTRMNQHVPILYVQLYTYQICRALNYLHHVVGVCHRDIKPQNLLVNPHTHQLKICDFGSAKM 289 (492)
Q Consensus 211 ~lV~E~~~~~l~-~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~yLH~~~givHrDlKp~NILl~~~~~~vkL~DFG~a~~ 289 (492)
||||+||+|+.+ +.++... ...+++..+..|+.||+.|+.|||+ ++|+|||||+.|||+++++ .|||+|||+|+.
T Consensus 80 ~Ivm~Y~eGg~l~~~i~~~k--~~~f~E~~i~~~~~Q~~~av~ylH~-~~iLHRDlK~~Nifltk~~-~VkLgDfGlaK~ 155 (426)
T KOG0589|consen 80 CIVMEYCEGGDLAQLIKEQK--GVLFPEERILKWFVQILLAVNYLHE-NRVLHRDLKCANIFLTKDK-KVKLGDFGLAKI 155 (426)
T ss_pred EEEEeecCCCCHHHHHHHHh--hccccHHHHHHHHHHHHHHHHHHHh-hhhhcccchhhhhhccccC-ceeecchhhhhh
Confidence 999999997644 4443322 5779999999999999999999997 9999999999999999998 689999999999
Q ss_pred cCCCC-CCccceeccCccCchhhcCCCCCCcchhhHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCCHHHHhhcC
Q 011138 290 LVPGE-PNISYICSRYYRAPELIFGATEYTTAIDMWSIGCVLAELLLGQPLFPGESGVDQLVEIIKILGTPTREEIKCMN 368 (492)
Q Consensus 290 ~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~~~~DvwSlGvil~ell~G~~pf~~~~~~~~~~~i~~~~g~p~~~~~~~~~ 368 (492)
+.+.. ...+.+||+.||.||++.+ .+|+.++|||||||++|||++-+++|.+.+-...+.+|.+....|
T Consensus 156 l~~~~~~a~tvvGTp~YmcPEil~d-~pYn~KSDiWsLGC~~yEm~~lk~aF~a~~m~~Li~ki~~~~~~P--------- 225 (426)
T KOG0589|consen 156 LNPEDSLASTVVGTPYYMCPEILSD-IPYNEKSDIWSLGCCLYEMCTLKPAFKASNMSELILKINRGLYSP--------- 225 (426)
T ss_pred cCCchhhhheecCCCcccCHHHhCC-CCCCccCcchhhcchHHHHHhcccccCccchHHHHHHHhhccCCC---------
Confidence 87776 6668899999999999965 459999999999999999999999999999988888888754333
Q ss_pred CCCcccCCCcccCCCcccccCCCCChhHhhhhccccccCCCCcCCHHHhhCCCCCCCCC
Q 011138 369 PNYTEFKFPQIKAHPWHKIFHKRMPPEALDLVSRLLQYSPSLRCTALEACAHPFFDDLR 427 (492)
Q Consensus 369 ~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~Li~~~L~~dP~~R~t~~e~l~Hp~f~~~~ 427 (492)
.+...+.+++.||..||..+|..||++.++|.+|.++...
T Consensus 226 -------------------lp~~ys~el~~lv~~~l~~~P~~RPsa~~LL~~P~l~~~~ 265 (426)
T KOG0589|consen 226 -------------------LPSMYSSELRSLVKSMLRKNPEHRPSALELLRRPHLLRYL 265 (426)
T ss_pred -------------------CCccccHHHHHHHHHHhhcCCccCCCHHHHhhChhhhhHH
Confidence 2245789999999999999999999999999999988443
No 106
>cd06649 PKc_MEK2 Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase 2. Protein kinases (PKs), MAP/ERK Kinase (MEK) 2 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK2 is a dual-specificity PK that phosphorylates and activates the downst
Probab=100.00 E-value=4.2e-44 Score=358.79 Aligned_cols=275 Identities=25% Similarity=0.426 Sum_probs=204.6
Q ss_pred cceeEeeeeccCCceEEEEEEEcCCCCEEEEEEeccc-----hhhHHHHHHHHHHcCCCCccccceeeeeccCCCceEEE
Q 011138 137 ISYMAERVVGTGSFGVVFQAKCLETGDSVAIKKVLQD-----KRYKNRELQIMRLLNHPNVVSLKHCFFSTTEKDELYLN 211 (492)
Q Consensus 137 ~~y~~~~~lG~G~fg~Vy~~~~~~~g~~vAiK~~~~~-----~~~~~~E~~il~~l~h~nIv~l~~~~~~~~~~~~~~~~ 211 (492)
.+|.+.+.||+|+||.||++.+..+|..||+|.+... ...+.+|+++++.++||||+++++++. +...++
T Consensus 5 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~-----~~~~~~ 79 (331)
T cd06649 5 DDFERISELGAGNGGVVTKVQHKPSGLIMARKLIHLEIKPAIRNQIIRELQVLHECNSPYIVGFYGAFY-----SDGEIS 79 (331)
T ss_pred ccceEEEeecCCCCEEEEEEEECCCCcEEEEEEeecccCHHHHHHHHHHHHHHHHCCCCCCCeEEEEEE-----ECCEEE
Confidence 4699999999999999999999999999999988543 134568999999999999999999884 334588
Q ss_pred EEeeechhh-HHHHhhhhhhcCCCcCHHHHHHHHHHHHHHHHHHHhhCCcccCCCCCCceEEcCCCCcEEEeeecCcccc
Q 011138 212 LVLEYISET-VYRVSKHYTRMNQHVPILYVQLYTYQICRALNYLHHVVGVCHRDIKPQNLLVNPHTHQLKICDFGSAKML 290 (492)
Q Consensus 212 lV~E~~~~~-l~~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~yLH~~~givHrDlKp~NILl~~~~~~vkL~DFG~a~~~ 290 (492)
+||||++++ |.+++. ....+++..+..++.||+.||.|||+..+|+||||||+|||++.++ .+||+|||++...
T Consensus 80 lv~e~~~~~~L~~~l~----~~~~~~~~~~~~~~~~i~~~l~~lH~~~~ivH~dlkp~Nil~~~~~-~~kl~Dfg~~~~~ 154 (331)
T cd06649 80 ICMEHMDGGSLDQVLK----EAKRIPEEILGKVSIAVLRGLAYLREKHQIMHRDVKPSNILVNSRG-EIKLCDFGVSGQL 154 (331)
T ss_pred EEeecCCCCcHHHHHH----HcCCCCHHHHHHHHHHHHHHHHHHhhcCCEEcCCCChhhEEEcCCC-cEEEccCcccccc
Confidence 999999875 443332 2346889999999999999999999623699999999999999887 7999999998765
Q ss_pred CCCCCCccceeccCccCchhhcCCCCCCcchhhHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCCHHHHhh----
Q 011138 291 VPGEPNISYICSRYYRAPELIFGATEYTTAIDMWSIGCVLAELLLGQPLFPGESGVDQLVEIIKILGTPTREEIKC---- 366 (492)
Q Consensus 291 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DvwSlGvil~ell~G~~pf~~~~~~~~~~~i~~~~g~p~~~~~~~---- 366 (492)
... ......||+.|+|||++.+. .++.++|||||||++|+|++|+.||...+..+. .. .++.+.......
T Consensus 155 ~~~-~~~~~~g~~~y~aPE~~~~~-~~~~~~DiwslG~il~el~tg~~p~~~~~~~~~-~~---~~~~~~~~~~~~~~~~ 228 (331)
T cd06649 155 IDS-MANSFVGTRSYMSPERLQGT-HYSVQSDIWSMGLSLVELAIGRYPIPPPDAKEL-EA---IFGRPVVDGEEGEPHS 228 (331)
T ss_pred ccc-ccccCCCCcCcCCHhHhcCC-CCCchHhHHHHHHHHHHHHhCCCCCCCCCHHHH-HH---HhcccccccccCCccc
Confidence 332 23456799999999999655 489999999999999999999999987665432 22 222221100000
Q ss_pred cCCCCcc-------c---CCCc---------ccCCCcccccCCCCChhHhhhhccccccCCCCcCCHHHhhCCCCCCCCC
Q 011138 367 MNPNYTE-------F---KFPQ---------IKAHPWHKIFHKRMPPEALDLVSRLLQYSPSLRCTALEACAHPFFDDLR 427 (492)
Q Consensus 367 ~~~~~~~-------~---~~~~---------~~~~~~~~~~~~~~s~~~~~Li~~~L~~dP~~R~t~~e~l~Hp~f~~~~ 427 (492)
..+.... . ..+. +............+++++++||.+||++||++|||+.++++||||+...
T Consensus 229 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~~P~~Rpt~~ell~h~~~~~~~ 308 (331)
T cd06649 229 ISPRPRPPGRPVSGHGMDSRPAMAIFELLDYIVNEPPPKLPNGVFTPDFQEFVNKCLIKNPAERADLKMLMNHTFIKRSE 308 (331)
T ss_pred cCcccccccccccccccccccchhHHHHHHHHHhCCCcCCCCccccHHHHHHHHHHccCCcccCCCHHHHhcChHHhhcc
Confidence 0000000 0 0000 0000000001124688999999999999999999999999999998643
No 107
>KOG0986 consensus G protein-coupled receptor kinase [Signal transduction mechanisms]
Probab=100.00 E-value=2e-45 Score=355.46 Aligned_cols=263 Identities=29% Similarity=0.415 Sum_probs=215.5
Q ss_pred CCccccceeEeeeeccCCceEEEEEEEcCCCCEEEEEEeccc-------hhhHHHHHHHHHHcCCCCccccceeeeeccC
Q 011138 132 QPKQTISYMAERVVGTGSFGVVFQAKCLETGDSVAIKKVLQD-------KRYKNRELQIMRLLNHPNVVSLKHCFFSTTE 204 (492)
Q Consensus 132 ~~~~~~~y~~~~~lG~G~fg~Vy~~~~~~~g~~vAiK~~~~~-------~~~~~~E~~il~~l~h~nIv~l~~~~~~~~~ 204 (492)
+|.....|..-++||+||||.||-|....||+.||+|++.+. +....+|..||.+++.+.||.+--.|
T Consensus 180 qpvt~n~F~~~RvlGkGGFGEV~acqvraTGKMYAcKkL~KKRiKkr~ge~maLnEk~iL~kV~s~FiVslaYAf----- 254 (591)
T KOG0986|consen 180 QPVTKNTFRVYRVLGKGGFGEVCACQVRATGKMYACKKLDKKRIKKRKGETMALNEKQILEKVSSPFIVSLAYAF----- 254 (591)
T ss_pred hhccccceeeeEEEecccccceeEEEEecchhhHHHHHHHHHHHHHhhhhHHhhHHHHHHHHhccCcEEEEeeee-----
Confidence 344455788889999999999999999999999999977432 23344799999999999999987666
Q ss_pred CCceEEEEEeeechhhHHHHhhhhhhcCCCcCHHHHHHHHHHHHHHHHHHHhhCCcccCCCCCCceEEcCCCCcEEEeee
Q 011138 205 KDELYLNLVLEYISETVYRVSKHYTRMNQHVPILYVQLYTYQICRALNYLHHVVGVCHRDIKPQNLLVNPHTHQLKICDF 284 (492)
Q Consensus 205 ~~~~~~~lV~E~~~~~l~~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~yLH~~~givHrDlKp~NILl~~~~~~vkL~DF 284 (492)
+....+|+||..|.|+-+.+.. +...+..|++..+++|+.+|+.||++||+ .+||+|||||+|||+|.+| .|+|+|+
T Consensus 255 eTkd~LClVLtlMNGGDLkfHi-yn~g~~gF~e~ra~FYAAEi~cGLehlH~-~~iVYRDLKPeNILLDd~G-hvRISDL 331 (591)
T KOG0986|consen 255 ETKDALCLVLTLMNGGDLKFHI-YNHGNPGFDEQRARFYAAEIICGLEHLHR-RRIVYRDLKPENILLDDHG-HVRISDL 331 (591)
T ss_pred cCCCceEEEEEeecCCceeEEe-eccCCCCCchHHHHHHHHHHHhhHHHHHh-cceeeccCChhheeeccCC-CeEeecc
Confidence 3334599999999987554322 22234679999999999999999999998 9999999999999999998 6999999
Q ss_pred cCccccCCCCCCccceeccCccCchhhcCCCCCCcchhhHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCCHHHH
Q 011138 285 GSAKMLVPGEPNISYICSRYYRAPELIFGATEYTTAIDMWSIGCVLAELLLGQPLFPGESGVDQLVEIIKILGTPTREEI 364 (492)
Q Consensus 285 G~a~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DvwSlGvil~ell~G~~pf~~~~~~~~~~~i~~~~g~p~~~~~ 364 (492)
|+|..+..+.+....+||..|||||++.+.. |+...|+|||||++|||+.|+.||........-.++-+..-.
T Consensus 332 GLAvei~~g~~~~~rvGT~GYMAPEvl~ne~-Y~~s~Dwf~lGCllYemi~G~sPFr~~KeKvk~eEvdrr~~~------ 404 (591)
T KOG0986|consen 332 GLAVEIPEGKPIRGRVGTVGYMAPEVLQNEV-YDFSPDWFSLGCLLYEMIAGHSPFRQRKEKVKREEVDRRTLE------ 404 (591)
T ss_pred ceEEecCCCCccccccCcccccCHHHHcCCc-ccCCccHHHHHhHHHHHHcccCchhhhhhhhhHHHHHHHHhc------
Confidence 9999998888888889999999999997665 999999999999999999999999765543332222221111
Q ss_pred hhcCCCCcccCCCcccCCCcccccCCCCChhHhhhhccccccCCCCcC-----CHHHhhCCCCCCCCCC
Q 011138 365 KCMNPNYTEFKFPQIKAHPWHKIFHKRMPPEALDLVSRLLQYSPSLRC-----TALEACAHPFFDDLRD 428 (492)
Q Consensus 365 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~Li~~~L~~dP~~R~-----t~~e~l~Hp~f~~~~~ 428 (492)
.. ..++...|+++++|.+.+|+.||.+|. +++++.+||||+++..
T Consensus 405 -------~~------------~ey~~kFS~eakslc~~LL~Kdp~~RLGcrg~ga~evk~HpfFk~lnw 454 (591)
T KOG0986|consen 405 -------DP------------EEYSDKFSEEAKSLCEGLLTKDPEKRLGCRGEGAQEVKEHPFFKDLNW 454 (591)
T ss_pred -------ch------------hhcccccCHHHHHHHHHHHccCHHHhccCCCcCcchhhhCcccccCCH
Confidence 11 123456899999999999999999998 5779999999998765
No 108
>cd05592 STKc_nPKC_theta_delta Catalytic domain of the Protein Serine/Threonine Kinases, Novel Protein Kinase C theta and delta. Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), theta and delta-like isoforms, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-theta is selectively expressed in T-cells and plays an imp
Probab=100.00 E-value=3.7e-44 Score=356.92 Aligned_cols=244 Identities=30% Similarity=0.483 Sum_probs=196.0
Q ss_pred eeeccCCceEEEEEEEcCCCCEEEEEEeccch-------hhHHHHHHHHHH-cCCCCccccceeeeeccCCCceEEEEEe
Q 011138 143 RVVGTGSFGVVFQAKCLETGDSVAIKKVLQDK-------RYKNRELQIMRL-LNHPNVVSLKHCFFSTTEKDELYLNLVL 214 (492)
Q Consensus 143 ~~lG~G~fg~Vy~~~~~~~g~~vAiK~~~~~~-------~~~~~E~~il~~-l~h~nIv~l~~~~~~~~~~~~~~~~lV~ 214 (492)
+.||+|+||.||+|.+..+++.||||++.... .....|..++.. ++||||+++++++ ....++|+||
T Consensus 1 ~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~hp~i~~~~~~~-----~~~~~~~lv~ 75 (316)
T cd05592 1 KVLGKGSFGKVMLAELKGTNEFFAIKALKKDVVLEDDDVECTMVERRVLALAWEHPFLTHLFCTF-----QTKEHLFFVM 75 (316)
T ss_pred CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhhHHHHHHHHHHHHhccCCCCccceeeEE-----EcCCEEEEEE
Confidence 36999999999999999999999999886432 122346666654 4799999999988 4445689999
Q ss_pred eechhhHH-HHhhhhhhcCCCcCHHHHHHHHHHHHHHHHHHHhhCCcccCCCCCCceEEcCCCCcEEEeeecCccccCCC
Q 011138 215 EYISETVY-RVSKHYTRMNQHVPILYVQLYTYQICRALNYLHHVVGVCHRDIKPQNLLVNPHTHQLKICDFGSAKMLVPG 293 (492)
Q Consensus 215 E~~~~~l~-~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~yLH~~~givHrDlKp~NILl~~~~~~vkL~DFG~a~~~~~~ 293 (492)
||++++.+ ..+. ....+++..+..++.||+.||.|||+ +||+||||||+|||++.++ .+||+|||+++.....
T Consensus 76 e~~~gg~L~~~~~----~~~~~~~~~~~~~~~qi~~al~~LH~-~~ivH~dlkp~Nill~~~~-~~kL~Dfg~a~~~~~~ 149 (316)
T cd05592 76 EYLNGGDLMFHIQ----SSGRFDEARARFYAAEIICGLQFLHK-KGIIYRDLKLDNVLLDKDG-HIKIADFGMCKENMNG 149 (316)
T ss_pred cCCCCCcHHHHHH----HcCCCCHHHHHHHHHHHHHHHHHHHH-CCEEeCCCCHHHeEECCCC-CEEEccCcCCeECCCC
Confidence 99986544 3322 23568999999999999999999997 9999999999999999887 7999999999754322
Q ss_pred -CCCccceeccCccCchhhcCCCCCCcchhhHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCCHHHHhhcCCCCc
Q 011138 294 -EPNISYICSRYYRAPELIFGATEYTTAIDMWSIGCVLAELLLGQPLFPGESGVDQLVEIIKILGTPTREEIKCMNPNYT 372 (492)
Q Consensus 294 -~~~~~~~gt~~y~aPE~~~~~~~~~~~~DvwSlGvil~ell~G~~pf~~~~~~~~~~~i~~~~g~p~~~~~~~~~~~~~ 372 (492)
......+||+.|+|||++.+. .++.++|||||||++|+|++|..||.+.+..+.+..+...
T Consensus 150 ~~~~~~~~gt~~y~aPE~~~~~-~~~~~~DvwslG~il~ell~G~~Pf~~~~~~~~~~~i~~~----------------- 211 (316)
T cd05592 150 EGKASTFCGTPDYIAPEILKGQ-KYNESVDWWSFGVLLYEMLIGQSPFHGEDEDELFDSILND----------------- 211 (316)
T ss_pred CCccccccCCccccCHHHHcCC-CCCCcccchhHHHHHHHHHhCCCCCCCCCHHHHHHHHHcC-----------------
Confidence 233456799999999999765 4899999999999999999999999988765555544320
Q ss_pred ccCCCcccCCCcccccCCCCChhHhhhhccccccCCCCcCCHH-HhhCCCCCCCCC
Q 011138 373 EFKFPQIKAHPWHKIFHKRMPPEALDLVSRLLQYSPSLRCTAL-EACAHPFFDDLR 427 (492)
Q Consensus 373 ~~~~~~~~~~~~~~~~~~~~s~~~~~Li~~~L~~dP~~R~t~~-e~l~Hp~f~~~~ 427 (492)
... ++..++.++.+||.+||+.||.+|+++. ++++||||..+.
T Consensus 212 ~~~------------~~~~~~~~~~~ll~~~l~~~P~~R~~~~~~l~~h~~~~~~~ 255 (316)
T cd05592 212 RPH------------FPRWISKEAKDCLSKLFERDPTKRLGVDGDIRQHPFFRGID 255 (316)
T ss_pred CCC------------CCCCCCHHHHHHHHHHccCCHHHcCCChHHHHcCcccCCCC
Confidence 001 2235789999999999999999999864 888999998764
No 109
>cd07847 STKc_CDKL1_4 Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase Like 1 and 4. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 1 (CDKL1) and CDKL4 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL1 and CDKL4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKL1, also called p42 KKIALRE, is a glial protein that is upregulated in gliosis. It is present in neuroblastoma and A431 human carcinoma cells, and may be implicated in neoplastic transformation. The functio
Probab=100.00 E-value=1.7e-43 Score=346.23 Aligned_cols=276 Identities=36% Similarity=0.650 Sum_probs=217.4
Q ss_pred ceeEeeeeccCCceEEEEEEEcCCCCEEEEEEeccch------hhHHHHHHHHHHcCCCCccccceeeeeccCCCceEEE
Q 011138 138 SYMAERVVGTGSFGVVFQAKCLETGDSVAIKKVLQDK------RYKNRELQIMRLLNHPNVVSLKHCFFSTTEKDELYLN 211 (492)
Q Consensus 138 ~y~~~~~lG~G~fg~Vy~~~~~~~g~~vAiK~~~~~~------~~~~~E~~il~~l~h~nIv~l~~~~~~~~~~~~~~~~ 211 (492)
+|++.+.||+|+||.||+|.+..+|+.||+|++.... ....+|+.+++.++|+||+++++++ .+..+++
T Consensus 2 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~-----~~~~~~~ 76 (286)
T cd07847 2 KYEKLSKIGEGSYGVVFKCRNRETGQIVAIKKFVESEDDPVIKKIALREIRMLKQLKHPNLVNLIEVF-----RRKRKLH 76 (286)
T ss_pred ceeeeeeecccCCeEEEEEEECCCCcEEEEEEEeecccCccccHHHHHHHHHHHhCCCCCEeeeeeEE-----eeCCEEE
Confidence 5999999999999999999999999999999875322 2345799999999999999999988 3445688
Q ss_pred EEeeechhhHHHHhhhhhhcCCCcCHHHHHHHHHHHHHHHHHHHhhCCcccCCCCCCceEEcCCCCcEEEeeecCccccC
Q 011138 212 LVLEYISETVYRVSKHYTRMNQHVPILYVQLYTYQICRALNYLHHVVGVCHRDIKPQNLLVNPHTHQLKICDFGSAKMLV 291 (492)
Q Consensus 212 lV~E~~~~~l~~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~yLH~~~givHrDlKp~NILl~~~~~~vkL~DFG~a~~~~ 291 (492)
+||||++++++.... .....+++..++.++.||+.||.|||+ .||+||||||+||+++.++ .+||+|||++....
T Consensus 77 ~v~e~~~~~~l~~~~---~~~~~~~~~~~~~~~~ql~~~l~~LH~-~~i~H~dl~p~nil~~~~~-~~~l~dfg~~~~~~ 151 (286)
T cd07847 77 LVFEYCDHTVLNELE---KNPRGVPEHLIKKIIWQTLQAVNFCHK-HNCIHRDVKPENILITKQG-QIKLCDFGFARILT 151 (286)
T ss_pred EEEeccCccHHHHHH---hCCCCCCHHHHHHHHHHHHHHHHHHHH-CCceecCCChhhEEEcCCC-cEEECccccceecC
Confidence 999999987665432 223468999999999999999999997 9999999999999999887 79999999998764
Q ss_pred CCC-CCccceeccCccCchhhcCCCCCCcchhhHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCCHHHHhhcC--
Q 011138 292 PGE-PNISYICSRYYRAPELIFGATEYTTAIDMWSIGCVLAELLLGQPLFPGESGVDQLVEIIKILGTPTREEIKCMN-- 368 (492)
Q Consensus 292 ~~~-~~~~~~gt~~y~aPE~~~~~~~~~~~~DvwSlGvil~ell~G~~pf~~~~~~~~~~~i~~~~g~p~~~~~~~~~-- 368 (492)
... ......++..|+|||++.+...++.++|||||||++|+|++|.+||.+.+..+.+..+.+.++...........
T Consensus 152 ~~~~~~~~~~~~~~~~aPE~~~~~~~~~~~~Di~slG~i~~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 231 (286)
T cd07847 152 GPGDDYTDYVATRWYRAPELLVGDTQYGPPVDVWAIGCVFAELLTGQPLWPGKSDVDQLYLIRKTLGDLIPRHQQIFSTN 231 (286)
T ss_pred CCcccccCcccccccCCHHHHhCCCCcCchhhhHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCChHHhhhcccc
Confidence 433 23345678999999998776668899999999999999999999999988888887777766654433221111
Q ss_pred CCCcccCCCcccCCCcccccCCCCChhHhhhhccccccCCCCcCCHHHhhCCCCC
Q 011138 369 PNYTEFKFPQIKAHPWHKIFHKRMPPEALDLVSRLLQYSPSLRCTALEACAHPFF 423 (492)
Q Consensus 369 ~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~Li~~~L~~dP~~R~t~~e~l~Hp~f 423 (492)
..+.....|......-.......++..+.+||.+||+.||++||++.|++.||||
T Consensus 232 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~eil~~~~f 286 (286)
T cd07847 232 QFFKGLSIPEPETREPLESKFPNISSPALSFLKGCLQMDPTERLSCEELLEHPYF 286 (286)
T ss_pred cccccccCCCcccccCHHHHhccCCHHHHHHHHHHhcCCccccCCHHHHhcCCCC
Confidence 1111122222111110111224578999999999999999999999999999998
No 110
>KOG0669 consensus Cyclin T-dependent kinase CDK9 [Cell cycle control, cell division, chromosome partitioning]
Probab=100.00 E-value=3e-46 Score=336.77 Aligned_cols=283 Identities=30% Similarity=0.525 Sum_probs=232.5
Q ss_pred ceeEeeeeccCCceEEEEEEEcCCCCEEEEEEeccch------hhHHHHHHHHHHcCCCCccccceeeeec---cCCCce
Q 011138 138 SYMAERVVGTGSFGVVFQAKCLETGDSVAIKKVLQDK------RYKNRELQIMRLLNHPNVVSLKHCFFST---TEKDEL 208 (492)
Q Consensus 138 ~y~~~~~lG~G~fg~Vy~~~~~~~g~~vAiK~~~~~~------~~~~~E~~il~~l~h~nIv~l~~~~~~~---~~~~~~ 208 (492)
.|.-..+||+|.||.||+|+.+.+|+.||+|++..+. ....+|+.+|..|+|+|++.+++.+-+. ...+..
T Consensus 18 ~yek~~kigqGtfgeVFkAr~~n~~kkvalkkvlmeneKeGfpitalreikiL~~lkHenv~nliEic~tk~Tp~~r~r~ 97 (376)
T KOG0669|consen 18 KYEKLAKIGQGTFGEVFKARSKNTGKKVALKKVLMENEKEGFPITALREIKILQLLKHENVVNLIEICRTKATPTNRDRA 97 (376)
T ss_pred HHHHHHhcCCchHHHHHHHhhcCccchhHHHHHHHhccccCCcHHHHHHHHHHHHhcchhHHHHHHHHhhccCCcccccc
Confidence 4777889999999999999999999999999764321 2234899999999999999998876432 234556
Q ss_pred EEEEEeeechhhHHHHhhhhhhcCCCcCHHHHHHHHHHHHHHHHHHHhhCCcccCCCCCCceEEcCCCCcEEEeeecCcc
Q 011138 209 YLNLVLEYISETVYRVSKHYTRMNQHVPILYVQLYTYQICRALNYLHHVVGVCHRDIKPQNLLVNPHTHQLKICDFGSAK 288 (492)
Q Consensus 209 ~~~lV~E~~~~~l~~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~yLH~~~givHrDlKp~NILl~~~~~~vkL~DFG~a~ 288 (492)
.+|+||++|+.+|..++.. ....++..+++.++.+++.||.|+|+ ..|+|||+|++|+||+.++ .+||+|||+++
T Consensus 98 t~ylVf~~cehDLaGlLsn---~~vr~sls~Ikk~Mk~Lm~GL~~iHr-~kilHRDmKaaNvLIt~dg-ilklADFGlar 172 (376)
T KOG0669|consen 98 TFYLVFDFCEHDLAGLLSN---RKVRFSLSEIKKVMKGLMNGLYYIHR-NKILHRDMKAANVLITKDG-ILKLADFGLAR 172 (376)
T ss_pred eeeeeHHHhhhhHHHHhcC---ccccccHHHHHHHHHHHHHHHHHHHH-hhHHhhcccHhhEEEcCCc-eEEeecccccc
Confidence 6999999999988776543 34678999999999999999999998 8999999999999999988 89999999997
Q ss_pred ccCCCC-----CCccceeccCccCchhhcCCCCCCcchhhHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCCHHH
Q 011138 289 MLVPGE-----PNISYICSRYYRAPELIFGATEYTTAIDMWSIGCVLAELLLGQPLFPGESGVDQLVEIIKILGTPTREE 363 (492)
Q Consensus 289 ~~~~~~-----~~~~~~gt~~y~aPE~~~~~~~~~~~~DvwSlGvil~ell~G~~pf~~~~~~~~~~~i~~~~g~p~~~~ 363 (492)
.+.... ..+..+.|.+|++||.++|...|+++.|||..|||+.||.+|.+.|++.++..++..|...+|..+.+.
T Consensus 173 ~fs~~~n~~kprytnrvvTLwYrppEllLG~r~yg~~iDiWgAgCimaeMwtrspimqgnteqqql~~Is~LcGs~tkev 252 (376)
T KOG0669|consen 173 AFSTSKNVVKPRYTNRVVTLWYRPPELLLGDREYGPPIDIWGAGCIMAEMWTRSPIMQGNTEQQQLHLISQLCGSITKEV 252 (376)
T ss_pred ceecccccCCCCcccceeeeecCCHHHhhcccccCCcchhHhHHHHHHHHHccCccccCChHHHHHHHHHHHhccCCccc
Confidence 663221 234567799999999999999999999999999999999999999999999999999999999999998
Q ss_pred HhhcC--CCCcccCCCcccCCCcccc---cCC-CCChhHhhhhccccccCCCCcCCHHHhhCCCCCCC
Q 011138 364 IKCMN--PNYTEFKFPQIKAHPWHKI---FHK-RMPPEALDLVSRLLQYSPSLRCTALEACAHPFFDD 425 (492)
Q Consensus 364 ~~~~~--~~~~~~~~~~~~~~~~~~~---~~~-~~s~~~~~Li~~~L~~dP~~R~t~~e~l~Hp~f~~ 425 (492)
|+.+. +.|..+..+.+.......+ ..+ .-.+++.||+.+||.+||.+|++++++++|.||..
T Consensus 253 WP~~d~lpL~~sie~ePl~~~~~rkv~n~~kp~~kd~~a~dLle~ll~~DP~kR~~ad~alnh~~F~k 320 (376)
T KOG0669|consen 253 WPNVDNLPLYQSIELEPLPKGQKRKVKNRLKPYVKDDEALDLLEKLLKLDPTKRIDADQALNHDFFWK 320 (376)
T ss_pred CCCcccchHHHhccCCCCCcchhhhhhhhcccccCChhHHHHHHHHhccCcccCcchHhhhchhhhhc
Confidence 87654 4444443333222222111 000 12468999999999999999999999999999985
No 111
>cd05575 STKc_SGK Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase. Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3 (also called cytokine-independent survival kinase CISK). SGKs are activated by insulin and growth factors via phosphoinositide 3-kinase and PDK1. They activate ion channels, ion carriers, and the Na-K-ATPase, as well as regulate the activity of enzymes and transcription factors. SGKs play important roles in transport, hormone release, neuroexcitability, cell pr
Probab=100.00 E-value=2e-44 Score=359.92 Aligned_cols=245 Identities=28% Similarity=0.455 Sum_probs=196.4
Q ss_pred eeeccCCceEEEEEEEcCCCCEEEEEEeccchh-------hHHHHH-HHHHHcCCCCccccceeeeeccCCCceEEEEEe
Q 011138 143 RVVGTGSFGVVFQAKCLETGDSVAIKKVLQDKR-------YKNREL-QIMRLLNHPNVVSLKHCFFSTTEKDELYLNLVL 214 (492)
Q Consensus 143 ~~lG~G~fg~Vy~~~~~~~g~~vAiK~~~~~~~-------~~~~E~-~il~~l~h~nIv~l~~~~~~~~~~~~~~~~lV~ 214 (492)
+.||+|+||+||+|.+..+|+.||||++..... ...+|. .+++.++||||+++++++ .+...+|+||
T Consensus 1 ~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~~~~~l~hp~iv~~~~~~-----~~~~~~~lv~ 75 (323)
T cd05575 1 KVIGKGSFGKVLLAKHKADGKFYAVKVLQKKAILKKKEQKHIMAERNVLLKNVKHPFLVGLHYSF-----QTADKLYFVL 75 (323)
T ss_pred CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHHhhhhHHHHHHHHHHHHHhhCCCCCCCCeeEEE-----EeCCEEEEEE
Confidence 369999999999999999999999999854321 112333 356789999999999888 3445689999
Q ss_pred eechhhHH-HHhhhhhhcCCCcCHHHHHHHHHHHHHHHHHHHhhCCcccCCCCCCceEEcCCCCcEEEeeecCccccCCC
Q 011138 215 EYISETVY-RVSKHYTRMNQHVPILYVQLYTYQICRALNYLHHVVGVCHRDIKPQNLLVNPHTHQLKICDFGSAKMLVPG 293 (492)
Q Consensus 215 E~~~~~l~-~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~yLH~~~givHrDlKp~NILl~~~~~~vkL~DFG~a~~~~~~ 293 (492)
||+.++.+ ..+. ....+++..++.++.||+.||.|||+ +||+||||||+|||++.++ .+||+|||+++.....
T Consensus 76 e~~~~g~L~~~l~----~~~~~~~~~~~~~~~qi~~~l~~lH~-~givH~dikp~NIll~~~~-~~kl~Dfg~~~~~~~~ 149 (323)
T cd05575 76 DYVNGGELFFHLQ----RERSFPEPRARFYAAEIASALGYLHS-LNIIYRDLKPENILLDSQG-HVVLTDFGLCKEGIEH 149 (323)
T ss_pred cCCCCCCHHHHHH----hcCCCCHHHHHHHHHHHHHHHHHHHH-CCeEeCCCCHHHeEECCCC-cEEEeccCCCcccccC
Confidence 99987543 3222 24568899999999999999999997 9999999999999999887 7999999998754222
Q ss_pred -CCCccceeccCccCchhhcCCCCCCcchhhHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCCHHHHhhcCCCCc
Q 011138 294 -EPNISYICSRYYRAPELIFGATEYTTAIDMWSIGCVLAELLLGQPLFPGESGVDQLVEIIKILGTPTREEIKCMNPNYT 372 (492)
Q Consensus 294 -~~~~~~~gt~~y~aPE~~~~~~~~~~~~DvwSlGvil~ell~G~~pf~~~~~~~~~~~i~~~~g~p~~~~~~~~~~~~~ 372 (492)
......+||+.|+|||++.+. .++.++|||||||++|+|++|..||.+.+..+....+...
T Consensus 150 ~~~~~~~~gt~~y~aPE~~~~~-~~~~~~DvwslG~il~ell~g~~pf~~~~~~~~~~~i~~~----------------- 211 (323)
T cd05575 150 SKTTSTFCGTPEYLAPEVLRKQ-PYDRTVDWWCLGAVLYEMLYGLPPFYSRDTAEMYDNILNK----------------- 211 (323)
T ss_pred CCccccccCChhhcChhhhcCC-CCCccccccccchhhhhhhcCCCCCCCCCHHHHHHHHHcC-----------------
Confidence 223356799999999999654 4899999999999999999999999987766555544331
Q ss_pred ccCCCcccCCCcccccCCCCChhHhhhhccccccCCCCcCCH----HHhhCCCCCCCCCC
Q 011138 373 EFKFPQIKAHPWHKIFHKRMPPEALDLVSRLLQYSPSLRCTA----LEACAHPFFDDLRD 428 (492)
Q Consensus 373 ~~~~~~~~~~~~~~~~~~~~s~~~~~Li~~~L~~dP~~R~t~----~e~l~Hp~f~~~~~ 428 (492)
... +...+++++.+||.+||+.||.+||++ .++++||||..+..
T Consensus 212 ~~~------------~~~~~~~~~~~li~~~l~~~p~~R~~~~~~~~~il~~~~~~~~~~ 259 (323)
T cd05575 212 PLR------------LKPNISVSARHLLEGLLQKDRTKRLGAKDDFLEIKNHVFFSSINW 259 (323)
T ss_pred CCC------------CCCCCCHHHHHHHHHHhhcCHHhCCCCCCCHHHHHcCCCcCCCCH
Confidence 001 123578999999999999999999998 69999999987653
No 112
>PHA03211 serine/threonine kinase US3; Provisional
Probab=100.00 E-value=4e-44 Score=371.35 Aligned_cols=274 Identities=24% Similarity=0.335 Sum_probs=206.8
Q ss_pred cceeEeeeeccCCceEEEEEEEcCCCCEEEEEEeccchhhHHHHHHHHHHcCCCCccccceeeeeccCCCceEEEEEeee
Q 011138 137 ISYMAERVVGTGSFGVVFQAKCLETGDSVAIKKVLQDKRYKNRELQIMRLLNHPNVVSLKHCFFSTTEKDELYLNLVLEY 216 (492)
Q Consensus 137 ~~y~~~~~lG~G~fg~Vy~~~~~~~g~~vAiK~~~~~~~~~~~E~~il~~l~h~nIv~l~~~~~~~~~~~~~~~~lV~E~ 216 (492)
..|.+.+.||+|+||.||+|.+..+++.||||.... ....+|+++|+.|+|+|||++++++.. ....++|||+
T Consensus 169 ~gy~i~~~Lg~G~~G~Vy~a~~~~~~~~vavK~~~~--~~~~~E~~iL~~L~HpnIv~l~~~~~~-----~~~~~lv~e~ 241 (461)
T PHA03211 169 LGFAIHRALTPGSEGCVFESSHPDYPQRVVVKAGWY--ASSVHEARLLRRLSHPAVLALLDVRVV-----GGLTCLVLPK 241 (461)
T ss_pred CCeEEEEEEccCCCeEEEEEEECCCCCEEEEecccc--cCHHHHHHHHHHCCCCCCCcEEEEEEE-----CCEEEEEEEc
Confidence 469999999999999999999999999999996432 335679999999999999999998743 3457899999
Q ss_pred chhhHHHHhhhhhhcCCCcCHHHHHHHHHHHHHHHHHHHhhCCcccCCCCCCceEEcCCCCcEEEeeecCccccCCCCC-
Q 011138 217 ISETVYRVSKHYTRMNQHVPILYVQLYTYQICRALNYLHHVVGVCHRDIKPQNLLVNPHTHQLKICDFGSAKMLVPGEP- 295 (492)
Q Consensus 217 ~~~~l~~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~yLH~~~givHrDlKp~NILl~~~~~~vkL~DFG~a~~~~~~~~- 295 (492)
+.++++..+.. ....+++..++.|+.||+.||.|||+ +|||||||||+||||+.++ .+||+|||+++.......
T Consensus 242 ~~~~L~~~l~~---~~~~l~~~~~~~i~~qi~~aL~yLH~-~gIvHrDLKP~NILl~~~~-~vkL~DFGla~~~~~~~~~ 316 (461)
T PHA03211 242 YRSDLYTYLGA---RLRPLGLAQVTAVARQLLSAIDYIHG-EGIIHRDIKTENVLVNGPE-DICLGDFGAACFARGSWST 316 (461)
T ss_pred cCCCHHHHHHh---cCCCCCHHHHHHHHHHHHHHHHHHHH-CCEEECcCCHHHEEECCCC-CEEEcccCCceeccccccc
Confidence 99887765533 23468999999999999999999997 9999999999999999887 799999999976533221
Q ss_pred --CccceeccCccCchhhcCCCCCCcchhhHHHHHHHHHHHhCCCCCCCCC-------hHHHHHHHHHHhCCCCHHHH--
Q 011138 296 --NISYICSRYYRAPELIFGATEYTTAIDMWSIGCVLAELLLGQPLFPGES-------GVDQLVEIIKILGTPTREEI-- 364 (492)
Q Consensus 296 --~~~~~gt~~y~aPE~~~~~~~~~~~~DvwSlGvil~ell~G~~pf~~~~-------~~~~~~~i~~~~g~p~~~~~-- 364 (492)
.....||+.|+|||++.+. .++.++|||||||+||||++|..|+.... ...++.++++..+....+..
T Consensus 317 ~~~~~~~GT~~Y~APE~~~~~-~~~~~sDvwSlGviL~El~~g~~~lf~~~~~~~~~~~~~~l~~~i~~~~~~~~~~~~~ 395 (461)
T PHA03211 317 PFHYGIAGTVDTNAPEVLAGD-PYTPSVDIWSAGLVIFEAAVHTASLFSASRGDERRPYDAQILRIIRQAQVHVDEFPQH 395 (461)
T ss_pred ccccccCCCcCCcCHHHHcCC-CCCchHHHHHHHHHHHHHHHcCCCcccCCcccccCCcHHHHHHHHHhhccccccCCCC
Confidence 2245799999999999765 48999999999999999999876543221 13455556554443221100
Q ss_pred ------hhcCCCCcccCCCcccCCCcccccCCCCChhHhhhhccccccCCCCcCCHHHhhCCCCCCC
Q 011138 365 ------KCMNPNYTEFKFPQIKAHPWHKIFHKRMPPEALDLVSRLLQYSPSLRCTALEACAHPFFDD 425 (492)
Q Consensus 365 ------~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~Li~~~L~~dP~~R~t~~e~l~Hp~f~~ 425 (492)
..+.........+......|...+ .++.++.+||.+||++||.+|||+.|+|+||||+.
T Consensus 396 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~dli~~mL~~DP~~RPsa~elL~hp~f~~ 460 (461)
T PHA03211 396 AGSRLVSQYRHRAARNRRPAYTRPAWTRYY--KLDLDVEYLVCRALTFDGARRPSAAELLRLPLFQS 460 (461)
T ss_pred cchHHHHHHHhhhhcccCCccCCcchhhhc--cccchHHHHHHHHcccChhhCcCHHHHhhCcccCC
Confidence 000000000111111222233221 46788999999999999999999999999999974
No 113
>cd05619 STKc_nPKC_theta Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C theta. Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), theta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-theta is selectively expressed in T-cells and plays an important and non-redundant role in
Probab=100.00 E-value=5.3e-44 Score=355.71 Aligned_cols=245 Identities=28% Similarity=0.478 Sum_probs=196.5
Q ss_pred eeeccCCceEEEEEEEcCCCCEEEEEEeccch-------hhHHHHHHHHHH-cCCCCccccceeeeeccCCCceEEEEEe
Q 011138 143 RVVGTGSFGVVFQAKCLETGDSVAIKKVLQDK-------RYKNRELQIMRL-LNHPNVVSLKHCFFSTTEKDELYLNLVL 214 (492)
Q Consensus 143 ~~lG~G~fg~Vy~~~~~~~g~~vAiK~~~~~~-------~~~~~E~~il~~-l~h~nIv~l~~~~~~~~~~~~~~~~lV~ 214 (492)
+.||+|+||.||+|.+..+++.||||++.... .....|..+++. ++||||+++++++. +..++|+||
T Consensus 1 ~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~hp~iv~~~~~~~-----~~~~~~lv~ 75 (316)
T cd05619 1 KMLGKGSFGKVFLAELKGTNQFFAIKALKKDVVLMDDDVECTMVEKRVLSLAWEHPFLTHLYCTFQ-----TKENLFFVM 75 (316)
T ss_pred CeeeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhcchHHHHHHHHHHHHhccCCCcCcceEEEEE-----eCCEEEEEE
Confidence 36999999999999999999999999886532 223357777775 48999999999883 344689999
Q ss_pred eechhh-HHHHhhhhhhcCCCcCHHHHHHHHHHHHHHHHHHHhhCCcccCCCCCCceEEcCCCCcEEEeeecCccccCC-
Q 011138 215 EYISET-VYRVSKHYTRMNQHVPILYVQLYTYQICRALNYLHHVVGVCHRDIKPQNLLVNPHTHQLKICDFGSAKMLVP- 292 (492)
Q Consensus 215 E~~~~~-l~~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~yLH~~~givHrDlKp~NILl~~~~~~vkL~DFG~a~~~~~- 292 (492)
||++++ +...+. ....+++..+..++.||+.||.|||+ +||+||||||+|||++.++ .+||+|||+++....
T Consensus 76 ey~~~g~L~~~l~----~~~~~~~~~~~~~~~qi~~al~~LH~-~~ivHrdikp~Nil~~~~~-~~kl~Dfg~~~~~~~~ 149 (316)
T cd05619 76 EYLNGGDLMFHIQ----SCHKFDLPRATFYAAEIICGLQFLHS-KGIVYRDLKLDNILLDTDG-HIKIADFGMCKENMLG 149 (316)
T ss_pred eCCCCCcHHHHHH----HcCCCCHHHHHHHHHHHHHHHHHHHh-CCeEeCCCCHHHEEECCCC-CEEEccCCcceECCCC
Confidence 999865 443332 23568889999999999999999997 9999999999999999887 799999999875322
Q ss_pred CCCCccceeccCccCchhhcCCCCCCcchhhHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCCHHHHhhcCCCCc
Q 011138 293 GEPNISYICSRYYRAPELIFGATEYTTAIDMWSIGCVLAELLLGQPLFPGESGVDQLVEIIKILGTPTREEIKCMNPNYT 372 (492)
Q Consensus 293 ~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DvwSlGvil~ell~G~~pf~~~~~~~~~~~i~~~~g~p~~~~~~~~~~~~~ 372 (492)
........||+.|+|||++.+. .++.++|||||||++|+|++|..||.+.+..+.+..+.. .
T Consensus 150 ~~~~~~~~gt~~y~aPE~~~~~-~~~~~~DvwslG~il~el~~G~~pf~~~~~~~~~~~i~~-----------------~ 211 (316)
T cd05619 150 DAKTCTFCGTPDYIAPEILLGQ-KYNTSVDWWSFGVLLYEMLIGQSPFHGHDEEELFQSIRM-----------------D 211 (316)
T ss_pred CCceeeecCCccccCHHHHcCC-CCCchhhhhhHHHHHHHHHhCCCCCCCCCHHHHHHHHHh-----------------C
Confidence 2233456789999999999654 489999999999999999999999988776554444321 0
Q ss_pred ccCCCcccCCCcccccCCCCChhHhhhhccccccCCCCcCCHH-HhhCCCCCCCCCC
Q 011138 373 EFKFPQIKAHPWHKIFHKRMPPEALDLVSRLLQYSPSLRCTAL-EACAHPFFDDLRD 428 (492)
Q Consensus 373 ~~~~~~~~~~~~~~~~~~~~s~~~~~Li~~~L~~dP~~R~t~~-e~l~Hp~f~~~~~ 428 (492)
... ++..++.++++||.+||+.||.+|+++. ++++||||+.+..
T Consensus 212 ~~~------------~~~~~~~~~~~li~~~l~~~P~~R~~~~~~l~~h~~~~~~~~ 256 (316)
T cd05619 212 NPC------------YPRWLTREAKDILVKLFVREPERRLGVKGDIRQHPFFREIDW 256 (316)
T ss_pred CCC------------CCccCCHHHHHHHHHHhccCHhhcCCChHHHHcCcccCCCCH
Confidence 001 1234688999999999999999999996 8999999998653
No 114
>cd07831 STKc_MOK Catalytic domain of the Serine/Threonine Kinase, MAPK/MAK/MRK Overlapping Kinase. Serine/Threonine Kinases (STKs), MAPK/MAK/MRK Overlapping Kinase (MOK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MOK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MOK, also called Renal tumor antigen 1 (RAGE-1), is widely expressed and is enriched in testis, kidney, lung, and brain. It is expressed in approximately 50% of renal cell carcinomas (RCC) and is a potential target for immunotherapy. MOK is stabilized by its association with the HSP90 molecular chaperone. It is induced by the transcription factor Cdx2 and may be involved in regulating intestinal epithelial development and differentiation.
Probab=100.00 E-value=1.3e-43 Score=346.40 Aligned_cols=275 Identities=36% Similarity=0.638 Sum_probs=219.2
Q ss_pred eeEeeeeccCCceEEEEEEEcCCCCEEEEEEeccch-----hhHHHHHHHHHHcC-CCCccccceeeeeccCCCceEEEE
Q 011138 139 YMAERVVGTGSFGVVFQAKCLETGDSVAIKKVLQDK-----RYKNRELQIMRLLN-HPNVVSLKHCFFSTTEKDELYLNL 212 (492)
Q Consensus 139 y~~~~~lG~G~fg~Vy~~~~~~~g~~vAiK~~~~~~-----~~~~~E~~il~~l~-h~nIv~l~~~~~~~~~~~~~~~~l 212 (492)
|.+.+.||+|+||.||+|.+..+++.||+|++.... ....+|+.+++++. |+||+++++++... ...++++
T Consensus 1 y~~~~~lg~g~~~~v~~~~~~~~~~~~aik~~~~~~~~~~~~~~~~e~~~l~~l~~h~~i~~~~~~~~~~---~~~~~~l 77 (282)
T cd07831 1 YKILGKIGEGTFSEVLKAQSRKTGKYYAIKCMKKHFKSLEQVNNLREIQALRRLSPHPNILRLIEVLFDR---KTGRLAL 77 (282)
T ss_pred CceEeeccccccceEEEEEEcCCCcEEEEEEehhccCCchhhhHHHHHHHHhhcCCCCCccceEEEEecC---CCCcEEE
Confidence 678889999999999999999999999999885432 12236888888885 99999999988543 1145899
Q ss_pred EeeechhhHHHHhhhhhhcCCCcCHHHHHHHHHHHHHHHHHHHhhCCcccCCCCCCceEEcCCCCcEEEeeecCccccCC
Q 011138 213 VLEYISETVYRVSKHYTRMNQHVPILYVQLYTYQICRALNYLHHVVGVCHRDIKPQNLLVNPHTHQLKICDFGSAKMLVP 292 (492)
Q Consensus 213 V~E~~~~~l~~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~yLH~~~givHrDlKp~NILl~~~~~~vkL~DFG~a~~~~~ 292 (492)
||||++++++..+.. ....+++..+..++.||+.||.|||+ .||+||||||+||+++. + .+||+|||++.....
T Consensus 78 v~e~~~~~l~~~l~~---~~~~~~~~~~~~~~~qi~~~L~~LH~-~~i~H~dl~p~ni~l~~-~-~~kl~dfg~~~~~~~ 151 (282)
T cd07831 78 VFELMDMNLYELIKG---RKRPLPEKRVKSYMYQLLKSLDHMHR-NGIFHRDIKPENILIKD-D-ILKLADFGSCRGIYS 151 (282)
T ss_pred EEecCCccHHHHHHh---ccCCCCHHHHHHHHHHHHHHHHHHHH-CCceecccCHHHEEEcC-C-CeEEEeccccccccc
Confidence 999999887765543 23468899999999999999999997 99999999999999998 5 899999999987654
Q ss_pred CCCCccceeccCccCchhhcCCCCCCcchhhHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCCHHHHhhcCCC-C
Q 011138 293 GEPNISYICSRYYRAPELIFGATEYTTAIDMWSIGCVLAELLLGQPLFPGESGVDQLVEIIKILGTPTREEIKCMNPN-Y 371 (492)
Q Consensus 293 ~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DvwSlGvil~ell~G~~pf~~~~~~~~~~~i~~~~g~p~~~~~~~~~~~-~ 371 (492)
........++..|+|||.+.+...++.++|||||||++|||++|.+||.+.+..+.+..+...++.+........... .
T Consensus 152 ~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slGv~l~el~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 231 (282)
T cd07831 152 KPPYTEYISTRWYRAPECLLTDGYYGPKMDIWAVGCVFFEILSLFPLFPGTNELDQIAKIHDVLGTPDAEVLKKFRKSRH 231 (282)
T ss_pred CCCcCCCCCCcccCChhHhhcCCCCCcchhHHHHHHHHHHHHcCCcCCCCCCHHHHHHHHHHHcCCCCHHHHHhhccccc
Confidence 444455678999999998766566789999999999999999999999999988888888888888877553322211 1
Q ss_pred cccCCCcccCCCcccccCCCCChhHhhhhccccccCCCCcCCHHHhhCCCCC
Q 011138 372 TEFKFPQIKAHPWHKIFHKRMPPEALDLVSRLLQYSPSLRCTALEACAHPFF 423 (492)
Q Consensus 372 ~~~~~~~~~~~~~~~~~~~~~s~~~~~Li~~~L~~dP~~R~t~~e~l~Hp~f 423 (492)
..+.++....... ..+...++.++.+||.+||.+||++||++.++++||||
T Consensus 232 ~~~~~~~~~~~~~-~~~~~~~~~~~~~li~~~l~~~P~~R~~~~~~l~~~~~ 282 (282)
T cd07831 232 MNYNFPSKKGTGL-RKLLPNASAEGLDLLKKLLAYDPDERITAKQALRHPYF 282 (282)
T ss_pred ccccCcccccccH-HHHcccccHHHHHHHHHHhccCcccccCHHHHhhCCCC
Confidence 1222222111111 11224578999999999999999999999999999998
No 115
>cd07841 STKc_CDK7 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 7. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 7 (CDK7) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK7 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK7 plays essential roles in the cell cycle and in transcription. It associates with cyclin H and MAT1 and acts as a CDK-Activating Kinase (CAK) by phosphorylating and activating cell cycle CDKs (CDK1/2/4/6). In the brain, it activates CDK5. CDK7 is
Probab=100.00 E-value=1.5e-43 Score=349.09 Aligned_cols=281 Identities=37% Similarity=0.632 Sum_probs=223.0
Q ss_pred ceeEeeeeccCCceEEEEEEEcCCCCEEEEEEeccch---------hhHHHHHHHHHHcCCCCccccceeeeeccCCCce
Q 011138 138 SYMAERVVGTGSFGVVFQAKCLETGDSVAIKKVLQDK---------RYKNRELQIMRLLNHPNVVSLKHCFFSTTEKDEL 208 (492)
Q Consensus 138 ~y~~~~~lG~G~fg~Vy~~~~~~~g~~vAiK~~~~~~---------~~~~~E~~il~~l~h~nIv~l~~~~~~~~~~~~~ 208 (492)
+|.+.+.||+|+||.||+|.+..+|+.||||.+.... ....+|+.+++.++|+||+++++++ .+..
T Consensus 1 ~y~~~~~lg~g~~~~vy~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~-----~~~~ 75 (298)
T cd07841 1 RYEKGKKLGEGTYAVVYKARDKETGRIVAIKKIKLGERKEAKDGINFTALREIKLLQELKHPNIIGLLDVF-----GHKS 75 (298)
T ss_pred CceeeeeeeeccccEEEEEEECCCCcEEEEEEEeccccccccchhhHHHHHHHHHHhhcCCCCChhhhhee-----ecCC
Confidence 4888999999999999999999999999999985432 1234699999999999999999998 3455
Q ss_pred EEEEEeeechhhHHHHhhhhhhcCCCcCHHHHHHHHHHHHHHHHHHHhhCCcccCCCCCCceEEcCCCCcEEEeeecCcc
Q 011138 209 YLNLVLEYISETVYRVSKHYTRMNQHVPILYVQLYTYQICRALNYLHHVVGVCHRDIKPQNLLVNPHTHQLKICDFGSAK 288 (492)
Q Consensus 209 ~~~lV~E~~~~~l~~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~yLH~~~givHrDlKp~NILl~~~~~~vkL~DFG~a~ 288 (492)
++++||||+.+++...+... ...+++..+..++.||+.||.|||+ +||+|+||||+|||++.++ .+||+|||++.
T Consensus 76 ~~~lv~e~~~~~L~~~i~~~---~~~~~~~~~~~~~~qi~~al~~lH~-~~i~H~dl~p~nill~~~~-~~~l~dfg~~~ 150 (298)
T cd07841 76 NINLVFEFMETDLEKVIKDK---SIVLTPADIKSYMLMTLRGLEYLHS-NWILHRDLKPNNLLIASDG-VLKLADFGLAR 150 (298)
T ss_pred EEEEEEcccCCCHHHHHhcc---CCCCCHHHHHHHHHHHHHHHHHHHh-CCeeecCCChhhEEEcCCC-CEEEccceeee
Confidence 78999999966666654321 1368899999999999999999997 9999999999999999887 79999999998
Q ss_pred ccCCCC-CCccceeccCccCchhhcCCCCCCcchhhHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCCHHHHhhc
Q 011138 289 MLVPGE-PNISYICSRYYRAPELIFGATEYTTAIDMWSIGCVLAELLLGQPLFPGESGVDQLVEIIKILGTPTREEIKCM 367 (492)
Q Consensus 289 ~~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~~~~DvwSlGvil~ell~G~~pf~~~~~~~~~~~i~~~~g~p~~~~~~~~ 367 (492)
...... ......+++.|+|||.+.+...++.++|+|||||++|+|++|.+||.+.+..+.+..+...++.|....+...
T Consensus 151 ~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~il~e~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 230 (298)
T cd07841 151 SFGSPNRKMTHQVVTRWYRAPELLFGARHYGVGVDMWSVGCIFAELLLRVPFLPGDSDIDQLGKIFEALGTPTEENWPGV 230 (298)
T ss_pred eccCCCccccccccceeeeCHHHHhCCCCCCcHHHHHHHHHHHHHHHcCCccccCCccHHHHHHHHHHcCCCchhhhhhc
Confidence 664432 2233466888999999876666899999999999999999999999998888888888888888877665432
Q ss_pred CCCCcccCCCcccCCCcccccCCCCChhHhhhhccccccCCCCcCCHHHhhCCCCCCCCCCC
Q 011138 368 NPNYTEFKFPQIKAHPWHKIFHKRMPPEALDLVSRLLQYSPSLRCTALEACAHPFFDDLRDP 429 (492)
Q Consensus 368 ~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~Li~~~L~~dP~~R~t~~e~l~Hp~f~~~~~~ 429 (492)
...............+. .......+.++.+||.+||..||.+|||+.|++.||||++...+
T Consensus 231 ~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~li~~~l~~~P~~R~s~~e~l~~~~~~~~~~~ 291 (298)
T cd07841 231 TSLPDYVEFKPFPPTPL-KQIFPAASDDALDLLQRLLTLNPNKRITARQALEHPYFSNDPAP 291 (298)
T ss_pred ccccccccccccCCcch-hhhcccccHHHHHHHHHHhcCCcccCcCHHHHhhCccccCCCCC
Confidence 21111111111111111 11234568899999999999999999999999999999986554
No 116
>cd07842 STKc_CDK8_like Catalytic domain of Cyclin-Dependent protein Kinase 8-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 8 (CDK8)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK8-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK8, CDC2L6, and similar proteins. CDK8 functions as a negative or positive regulator of transcription, depending on the scenario. Together with its regulator, cyclin C, it reversibly associates with the
Probab=100.00 E-value=1.2e-43 Score=352.39 Aligned_cols=281 Identities=36% Similarity=0.628 Sum_probs=216.9
Q ss_pred ceeEeeeeccCCceEEEEEEEcC--CCCEEEEEEeccch-------hhHHHHHHHHHHcCCCCccccceeeeeccCCCce
Q 011138 138 SYMAERVVGTGSFGVVFQAKCLE--TGDSVAIKKVLQDK-------RYKNRELQIMRLLNHPNVVSLKHCFFSTTEKDEL 208 (492)
Q Consensus 138 ~y~~~~~lG~G~fg~Vy~~~~~~--~g~~vAiK~~~~~~-------~~~~~E~~il~~l~h~nIv~l~~~~~~~~~~~~~ 208 (492)
+|.+.+.||+|+||.||+|.+.. ++..||||.+.... ....+|+.+++.++||||+++++++... ...
T Consensus 1 ~y~~~~~ig~g~~g~v~~~~~~~~~~~~~~alK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~---~~~ 77 (316)
T cd07842 1 KYEIEGCIGRGTYGRVYKAKRKNGKDGKEYAIKKFKGDKEQYTGISQSACREIALLRELKHENVVSLVEVFLEH---ADK 77 (316)
T ss_pred CceEEEEeccCCcEEEEEEEecCCCCCCeEEEEEeccccccccCccHHHHHHHHHHHhcCCCCccceEEEEeCC---CCc
Confidence 48899999999999999999988 89999999986532 3345799999999999999999988432 225
Q ss_pred EEEEEeeechhhHHHHhhhhhhcC-CCcCHHHHHHHHHHHHHHHHHHHhhCCcccCCCCCCceEEcC----CCCcEEEee
Q 011138 209 YLNLVLEYISETVYRVSKHYTRMN-QHVPILYVQLYTYQICRALNYLHHVVGVCHRDIKPQNLLVNP----HTHQLKICD 283 (492)
Q Consensus 209 ~~~lV~E~~~~~l~~~~~~~~~~~-~~~~~~~~~~i~~qi~~aL~yLH~~~givHrDlKp~NILl~~----~~~~vkL~D 283 (492)
.+++||||+++++...+....... ..+++..++.++.||+.||.|||+ +||+||||||+|||++. ++ .+||+|
T Consensus 78 ~~~lv~e~~~~~l~~~~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~-~~i~h~dlkp~Nil~~~~~~~~~-~~kl~D 155 (316)
T cd07842 78 SVYLLFDYAEHDLWQIIKFHRQAKRVSIPPSMVKSLLWQILNGVHYLHS-NWVLHRDLKPANILVMGEGPERG-VVKIGD 155 (316)
T ss_pred eEEEEEeCCCcCHHHHHHhhccCCCcCcCHHHHHHHHHHHHHHHHHHHh-CCEeeCCCCHHHEEEcCCCCccc-eEEECC
Confidence 689999999988777665443333 368899999999999999999997 99999999999999998 66 799999
Q ss_pred ecCccccCCCCC----CccceeccCccCchhhcCCCCCCcchhhHHHHHHHHHHHhCCCCCCCCChH---------HHHH
Q 011138 284 FGSAKMLVPGEP----NISYICSRYYRAPELIFGATEYTTAIDMWSIGCVLAELLLGQPLFPGESGV---------DQLV 350 (492)
Q Consensus 284 FG~a~~~~~~~~----~~~~~gt~~y~aPE~~~~~~~~~~~~DvwSlGvil~ell~G~~pf~~~~~~---------~~~~ 350 (492)
||++........ .....+++.|+|||++.+...++.++|||||||++|+|++|++||.+.... ..+.
T Consensus 156 fg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~ 235 (316)
T cd07842 156 LGLARLFNAPLKPLADLDPVVVTIWYRAPELLLGARHYTKAIDIWAIGCIFAELLTLEPIFKGREAKIKKSNPFQRDQLE 235 (316)
T ss_pred CccccccCCCcccccccCCccccccccCHHHHhCCCCCCcHHHHHHHHHHHHHHHhcCCCCcCCcccccccchhHHHHHH
Confidence 999876532221 224567899999999877666899999999999999999999999865532 3566
Q ss_pred HHHHHhCCCCHHHHhhcC--CCCccc----CCCcccCCCcccccC--CCCChhHhhhhccccccCCCCcCCHHHhhCCCC
Q 011138 351 EIIKILGTPTREEIKCMN--PNYTEF----KFPQIKAHPWHKIFH--KRMPPEALDLVSRLLQYSPSLRCTALEACAHPF 422 (492)
Q Consensus 351 ~i~~~~g~p~~~~~~~~~--~~~~~~----~~~~~~~~~~~~~~~--~~~s~~~~~Li~~~L~~dP~~R~t~~e~l~Hp~ 422 (492)
.++..++.+....+.... +.+... .............+. ...+.++.++|.+||+.||++|||+.|+++|||
T Consensus 236 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~P~~Rps~~eil~~~~ 315 (316)
T cd07842 236 RIFEVLGTPTEKDWPDIKKMPEYDTLMKDFKTKTYPSNSLAKWMEKHKKPDSQGFDLLRKLLEYDPTKRITAEEALEHPY 315 (316)
T ss_pred HHHHHhCCCchhHHHHHhhcccchhhhhhccCCCCCCccHHHHHHhccCCCHHHHHHHHHHhcCCcccCcCHHHHhcCCC
Confidence 777777777665543221 111110 000000001111111 257789999999999999999999999999999
Q ss_pred C
Q 011138 423 F 423 (492)
Q Consensus 423 f 423 (492)
|
T Consensus 316 f 316 (316)
T cd07842 316 F 316 (316)
T ss_pred C
Confidence 8
No 117
>cd05618 STKc_aPKC_iota Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C iota. Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, iota isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. There are two aPKC isoforms, zeta and iota. PKC-iota is directly implicated in carcinogenesis. It is critical to oncogenic signaling mediated by Ras and Bcr-Abl. The PKC-iota gene is the target o
Probab=100.00 E-value=4.4e-44 Score=358.31 Aligned_cols=246 Identities=27% Similarity=0.516 Sum_probs=193.8
Q ss_pred eeeccCCceEEEEEEEcCCCCEEEEEEeccch-------hhHHHHHHHHHHc-CCCCccccceeeeeccCCCceEEEEEe
Q 011138 143 RVVGTGSFGVVFQAKCLETGDSVAIKKVLQDK-------RYKNRELQIMRLL-NHPNVVSLKHCFFSTTEKDELYLNLVL 214 (492)
Q Consensus 143 ~~lG~G~fg~Vy~~~~~~~g~~vAiK~~~~~~-------~~~~~E~~il~~l-~h~nIv~l~~~~~~~~~~~~~~~~lV~ 214 (492)
+.||+|+||.||+|.+..+++.||+|++.+.. ....+|+.++..+ +||||+++++++ .+...+|+||
T Consensus 1 ~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~~~~hp~iv~~~~~~-----~~~~~~~lv~ 75 (329)
T cd05618 1 RVIGRGSYAKVLLVRLKKTERIYAMKVVKKELVNDDEDIDWVQTEKHVFEQASNHPFLVGLHSCF-----QTESRLFFVI 75 (329)
T ss_pred CeeeeCCCeEEEEEEECCCCCEEEEEEEEhhHhcchhHHHHHHHHHHHHHhcCCCCcCCceeeEE-----EeCCEEEEEE
Confidence 46999999999999999999999999986431 2244688888776 799999999998 4445689999
Q ss_pred eechhhHHHHhhhhhhcCCCcCHHHHHHHHHHHHHHHHHHHhhCCcccCCCCCCceEEcCCCCcEEEeeecCccccC-CC
Q 011138 215 EYISETVYRVSKHYTRMNQHVPILYVQLYTYQICRALNYLHHVVGVCHRDIKPQNLLVNPHTHQLKICDFGSAKMLV-PG 293 (492)
Q Consensus 215 E~~~~~l~~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~yLH~~~givHrDlKp~NILl~~~~~~vkL~DFG~a~~~~-~~ 293 (492)
||+.++.+... ......+++..++.++.||+.||.|||+ +||+||||||+|||++.++ .+||+|||+++... ..
T Consensus 76 E~~~~~~L~~~---~~~~~~l~~~~~~~i~~qi~~~l~~lH~-~~ivH~Dikp~Nili~~~~-~~kL~DfG~~~~~~~~~ 150 (329)
T cd05618 76 EYVNGGDLMFH---MQRQRKLPEEHARFYSAEISLALNYLHE-RGIIYRDLKLDNVLLDSEG-HIKLTDYGMCKEGLRPG 150 (329)
T ss_pred eCCCCCCHHHH---HHHcCCCCHHHHHHHHHHHHHHHHHHHH-CCeeeCCCCHHHEEECCCC-CEEEeeCCccccccCCC
Confidence 99997644321 1224568999999999999999999997 9999999999999999888 79999999987532 22
Q ss_pred CCCccceeccCccCchhhcCCCCCCcchhhHHHHHHHHHHHhCCCCCCCCC--------hHHHHHHHHHHhCCCCHHHHh
Q 011138 294 EPNISYICSRYYRAPELIFGATEYTTAIDMWSIGCVLAELLLGQPLFPGES--------GVDQLVEIIKILGTPTREEIK 365 (492)
Q Consensus 294 ~~~~~~~gt~~y~aPE~~~~~~~~~~~~DvwSlGvil~ell~G~~pf~~~~--------~~~~~~~i~~~~g~p~~~~~~ 365 (492)
.......||+.|+|||++.+. .++.++|||||||++|+|++|..||.... ....+.+.+..
T Consensus 151 ~~~~~~~gt~~y~aPE~~~~~-~~~~~~DiwslG~il~el~~g~~Pf~~~~~~~~~~~~~~~~~~~~i~~---------- 219 (329)
T cd05618 151 DTTSTFCGTPNYIAPEILRGE-DYGFSVDWWALGVLMFEMMAGRSPFDIVGSSDNPDQNTEDYLFQVILE---------- 219 (329)
T ss_pred CccccccCCccccCHHHHcCC-CCCCccceecccHHHHHHhhCCCCCccCCCcCCcccccHHHHHHHHhc----------
Confidence 333456899999999999765 48999999999999999999999995311 11111111110
Q ss_pred hcCCCCcccCCCcccCCCcccccCCCCChhHhhhhccccccCCCCcCC------HHHhhCCCCCCCCC
Q 011138 366 CMNPNYTEFKFPQIKAHPWHKIFHKRMPPEALDLVSRLLQYSPSLRCT------ALEACAHPFFDDLR 427 (492)
Q Consensus 366 ~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~Li~~~L~~dP~~R~t------~~e~l~Hp~f~~~~ 427 (492)
.... ++..++.++.+||++||+.||.+|++ +.++++||||+.+.
T Consensus 220 ------~~~~------------~p~~~~~~~~~ll~~~L~~dP~~R~~~~~~~~~~~i~~hp~f~~~~ 269 (329)
T cd05618 220 ------KQIR------------IPRSLSVKAASVLKSFLNKDPKERLGCHPQTGFADIQGHPFFRNVD 269 (329)
T ss_pred ------CCCC------------CCCCCCHHHHHHHHHHhcCCHHHcCCCCCCCCHHHHhcCCCCCCCC
Confidence 0111 23457899999999999999999998 47999999998764
No 118
>cd07843 STKc_CDC2L1 Catalytic domain of the Serine/Threonine Kinase, Cell Division Cycle 2-like 1. Serine/Threonine Kinases (STKs), Cell Division Cycle 2-like 1 (CDC2L1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDC2L1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDC2L1, also called PITSLRE, exists in different isoforms which are named using the alias CDK11(p). The CDC2L1 gene produces two protein products, CDK11(p110) and CDK11(p58). CDC2L1 is also represented by the caspase-processed CDK11(p46). CDK11(p110), the
Probab=100.00 E-value=1e-43 Score=349.61 Aligned_cols=279 Identities=37% Similarity=0.614 Sum_probs=224.5
Q ss_pred cceeEeeeeccCCceEEEEEEEcCCCCEEEEEEeccch------hhHHHHHHHHHHcCCCCccccceeeeeccCCCceEE
Q 011138 137 ISYMAERVVGTGSFGVVFQAKCLETGDSVAIKKVLQDK------RYKNRELQIMRLLNHPNVVSLKHCFFSTTEKDELYL 210 (492)
Q Consensus 137 ~~y~~~~~lG~G~fg~Vy~~~~~~~g~~vAiK~~~~~~------~~~~~E~~il~~l~h~nIv~l~~~~~~~~~~~~~~~ 210 (492)
.+|.+.+.||.|+||.||+|.+..+++.+|+|.+.... ....+|+.+++.++||||+++++++.... ..++
T Consensus 5 ~~y~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~h~ni~~~~~~~~~~~---~~~~ 81 (293)
T cd07843 5 DEYEKLNRIEEGTYGVVYRARDKKTGEIVALKKLKMEKEKEGFPITSLREINILLKLQHPNIVTVKEVVVGSN---LDKI 81 (293)
T ss_pred hhhhhhhhhcCCCCeEEEEEEECCCCcEEEEEEEeeccccccchhhHHHHHHHHHhcCCCCEEEEEEEEEecC---CCcE
Confidence 35999999999999999999999999999999885322 12347999999999999999999875432 2468
Q ss_pred EEEeeechhhHHHHhhhhhhcCCCcCHHHHHHHHHHHHHHHHHHHhhCCcccCCCCCCceEEcCCCCcEEEeeecCcccc
Q 011138 211 NLVLEYISETVYRVSKHYTRMNQHVPILYVQLYTYQICRALNYLHHVVGVCHRDIKPQNLLVNPHTHQLKICDFGSAKML 290 (492)
Q Consensus 211 ~lV~E~~~~~l~~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~yLH~~~givHrDlKp~NILl~~~~~~vkL~DFG~a~~~ 290 (492)
|+||||+.+++...+... ...+++..++.++.||+.||.|||+ +||+||||||+|||++.++ .+||+|||++...
T Consensus 82 ~lv~e~~~~~L~~~~~~~---~~~l~~~~~~~i~~qi~~aL~~LH~-~~i~H~dl~p~nili~~~~-~~~l~d~g~~~~~ 156 (293)
T cd07843 82 YMVMEYVEHDLKSLMETM---KQPFLQSEVKCLMLQLLSGVAHLHD-NWILHRDLKTSNLLLNNRG-ILKICDFGLAREY 156 (293)
T ss_pred EEEehhcCcCHHHHHHhc---cCCCCHHHHHHHHHHHHHHHHHHHH-CCeeeccCCHHHEEECCCC-cEEEeecCceeec
Confidence 999999998776654431 2368999999999999999999997 9999999999999999887 7999999998866
Q ss_pred CCC-CCCccceeccCccCchhhcCCCCCCcchhhHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCCHHHHhhcCC
Q 011138 291 VPG-EPNISYICSRYYRAPELIFGATEYTTAIDMWSIGCVLAELLLGQPLFPGESGVDQLVEIIKILGTPTREEIKCMNP 369 (492)
Q Consensus 291 ~~~-~~~~~~~gt~~y~aPE~~~~~~~~~~~~DvwSlGvil~ell~G~~pf~~~~~~~~~~~i~~~~g~p~~~~~~~~~~ 369 (492)
... .......+++.|+|||.+.+...++.++|+|||||++|+|++|.+||...+..+.+..+...++.|....+.....
T Consensus 157 ~~~~~~~~~~~~~~~~~aPE~~~~~~~~~~~~Di~slG~~l~~l~~g~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 236 (293)
T cd07843 157 GSPLKPYTQLVVTLWYRAPELLLGAKEYSTAIDMWSVGCIFAELLTKKPLFPGKSEIDQLNKIFKLLGTPTEKIWPGFSE 236 (293)
T ss_pred cCCccccccccccccccCchhhcCCccccchhhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCchHHHHHhhc
Confidence 443 2233456789999999987766678999999999999999999999999999889999999999888877654321
Q ss_pred --CCcccCCCcccCCCcccccCCC-CChhHhhhhccccccCCCCcCCHHHhhCCCCC
Q 011138 370 --NYTEFKFPQIKAHPWHKIFHKR-MPPEALDLVSRLLQYSPSLRCTALEACAHPFF 423 (492)
Q Consensus 370 --~~~~~~~~~~~~~~~~~~~~~~-~s~~~~~Li~~~L~~dP~~R~t~~e~l~Hp~f 423 (492)
......+.......+...++.. +++.+.+||++||+.||++|||+.|++.||||
T Consensus 237 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~R~t~~ell~~~~f 293 (293)
T cd07843 237 LPGAKKKTFTKYPYNQLRKKFPALSLSDNGFDLLNRLLTYDPAKRISAEDALKHPYF 293 (293)
T ss_pred cchhcccccccccchhhhccccccCCChHHHHHHHHHhccCccccCCHHHHhcCCCC
Confidence 1111111111222223334333 68899999999999999999999999999998
No 119
>cd05586 STKc_Sck1_like Catalytic domain of Suppressor of loss of cAMP-dependent protein kinase-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Fission yeast Suppressor of loss of cAMP-dependent protein kinase (Sck1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sck1-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of fungal proteins with similarity to the Schizosaccharomyces pombe STK Sck1. Sck1 plays a role in trehalase activation triggered by glucose and a nitrogen source. Trehalase catalyzes the cleavage of the disaccharide trehalose to glucose. Trehalose, as a carbohydrate reserve and stress metabolite, plays an important role in the response of
Probab=100.00 E-value=1.5e-44 Score=361.82 Aligned_cols=244 Identities=27% Similarity=0.483 Sum_probs=195.9
Q ss_pred eccCCceEEEEEEEcCCCCEEEEEEeccchh-------hHHHHHHHHHHc---CCCCccccceeeeeccCCCceEEEEEe
Q 011138 145 VGTGSFGVVFQAKCLETGDSVAIKKVLQDKR-------YKNRELQIMRLL---NHPNVVSLKHCFFSTTEKDELYLNLVL 214 (492)
Q Consensus 145 lG~G~fg~Vy~~~~~~~g~~vAiK~~~~~~~-------~~~~E~~il~~l---~h~nIv~l~~~~~~~~~~~~~~~~lV~ 214 (492)
||+|+||+||+|++..+|+.||||++.+... ...+|..++..+ +||||++++++| .+...+|+||
T Consensus 1 lG~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~p~i~~~~~~~-----~~~~~~~lv~ 75 (330)
T cd05586 1 IGKGTFGQVYQVRKKDTRRIYAMKVLSKKEIVAKKEVAHTIGERNILVRTLLDESPFIVGLKFSF-----QTDSDLYLVT 75 (330)
T ss_pred CCCCCceEEEEEEECCCCCEEEEEEEeHHHHhhhhHHHHHHHHHHHHHHhccCCCCcCcceEEEE-----ecCCeEEEEE
Confidence 7999999999999999999999999854321 122466666655 699999999988 4445689999
Q ss_pred eechhh-HHHHhhhhhhcCCCcCHHHHHHHHHHHHHHHHHHHhhCCcccCCCCCCceEEcCCCCcEEEeeecCccccCC-
Q 011138 215 EYISET-VYRVSKHYTRMNQHVPILYVQLYTYQICRALNYLHHVVGVCHRDIKPQNLLVNPHTHQLKICDFGSAKMLVP- 292 (492)
Q Consensus 215 E~~~~~-l~~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~yLH~~~givHrDlKp~NILl~~~~~~vkL~DFG~a~~~~~- 292 (492)
||+.++ +...+. ....+++..++.++.||+.||.|||+ +||+||||||+|||++.++ .+||+|||++.....
T Consensus 76 e~~~~g~L~~~l~----~~~~~~~~~~~~~~~qil~al~~LH~-~~ivHrDlkp~Nili~~~~-~~kl~Dfg~a~~~~~~ 149 (330)
T cd05586 76 DYMSGGELFWHLQ----KEGRFSEDRAKFYIAELVLALEHLHK-YDIVYRDLKPENILLDATG-HIALCDFGLSKANLTD 149 (330)
T ss_pred cCCCCChHHHHHH----hcCCCCHHHHHHHHHHHHHHHHHHHH-CCeEeccCCHHHeEECCCC-CEEEecCCcCcCCCCC
Confidence 999865 433322 24568999999999999999999997 9999999999999999887 799999999875432
Q ss_pred CCCCccceeccCccCchhhcCCCCCCcchhhHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCCHHHHhhcCCCCc
Q 011138 293 GEPNISYICSRYYRAPELIFGATEYTTAIDMWSIGCVLAELLLGQPLFPGESGVDQLVEIIKILGTPTREEIKCMNPNYT 372 (492)
Q Consensus 293 ~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DvwSlGvil~ell~G~~pf~~~~~~~~~~~i~~~~g~p~~~~~~~~~~~~~ 372 (492)
.......+||+.|+|||++.+...++.++|||||||++|+|++|..||.+.+..+.+..+.. .
T Consensus 150 ~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DvwslGvil~elltG~~Pf~~~~~~~~~~~i~~-----------------~ 212 (330)
T cd05586 150 NKTTNTFCGTTEYLAPEVLLDEKGYTKHVDFWSLGVLVFEMCCGWSPFYAEDTQQMYRNIAF-----------------G 212 (330)
T ss_pred CCCccCccCCccccCHHHHcCCCCCCCccceeccccEEEEeccCCCCCCCCCHHHHHHHHHc-----------------C
Confidence 22334567999999999997666689999999999999999999999988776554444422 1
Q ss_pred ccCCCcccCCCcccccCCCCChhHhhhhccccccCCCCcC----CHHHhhCCCCCCCCC
Q 011138 373 EFKFPQIKAHPWHKIFHKRMPPEALDLVSRLLQYSPSLRC----TALEACAHPFFDDLR 427 (492)
Q Consensus 373 ~~~~~~~~~~~~~~~~~~~~s~~~~~Li~~~L~~dP~~R~----t~~e~l~Hp~f~~~~ 427 (492)
...++. ..+++++++||++||..||.+|| ++.++++||||.+..
T Consensus 213 ~~~~~~-----------~~~~~~~~~li~~~L~~~P~~R~~~~~~~~~ll~h~~~~~~~ 260 (330)
T cd05586 213 KVRFPK-----------NVLSDEGRQFVKGLLNRNPQHRLGAHRDAVELKEHPFFADID 260 (330)
T ss_pred CCCCCC-----------ccCCHHHHHHHHHHcCCCHHHCCCCCCCHHHHhcCccccCCC
Confidence 111221 23689999999999999999998 799999999998754
No 120
>KOG0607 consensus MAP kinase-interacting kinase and related serine/threonine protein kinases [Signal transduction mechanisms]
Probab=100.00 E-value=6.7e-45 Score=337.95 Aligned_cols=257 Identities=28% Similarity=0.473 Sum_probs=206.0
Q ss_pred ceeE-eeeeccCCceEEEEEEEcCCCCEEEEEEeccch----hhHHHHHHHHHHcC-CCCccccceeeeeccCCCceEEE
Q 011138 138 SYMA-ERVVGTGSFGVVFQAKCLETGDSVAIKKVLQDK----RYKNRELQIMRLLN-HPNVVSLKHCFFSTTEKDELYLN 211 (492)
Q Consensus 138 ~y~~-~~~lG~G~fg~Vy~~~~~~~g~~vAiK~~~~~~----~~~~~E~~il~~l~-h~nIv~l~~~~~~~~~~~~~~~~ 211 (492)
-|.+ .+.||+|+|+.|--|+...+|..||||++.+.. ...-||++++..++ |+||++|+++| +++..+|
T Consensus 78 ~YkLt~e~LGeGAyasVqtcv~i~t~~EYAVKiidKq~gHsR~RvfREVe~f~~Cqgh~nilqLiefF-----Edd~~FY 152 (463)
T KOG0607|consen 78 MYKLTSELLGEGAYASVQTCVSIQTGKEYAVKIIDKQPGHSRSRVFREVETFYQCQGHKNILQLIEFF-----EDDTRFY 152 (463)
T ss_pred HHHhHHHHhcCccceeeeeeeeeccchhhhhhhhhcCCchHHHHHHHHHHHHHHhcCCccHHHHHHHh-----cccceEE
Confidence 3554 368999999999999999999999999996543 33458999999986 99999999999 7777899
Q ss_pred EEeeechhh-HHHHhhhhhhcCCCcCHHHHHHHHHHHHHHHHHHHhhCCcccCCCCCCceEEcCCCC--cEEEeeecCcc
Q 011138 212 LVLEYISET-VYRVSKHYTRMNQHVPILYVQLYTYQICRALNYLHHVVGVCHRDIKPQNLLVNPHTH--QLKICDFGSAK 288 (492)
Q Consensus 212 lV~E~~~~~-l~~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~yLH~~~givHrDlKp~NILl~~~~~--~vkL~DFG~a~ 288 (492)
||||-+.|+ ++..+. ....|.+.++..++..|+.||.|||. +||.||||||+|||-..... -||||||.++.
T Consensus 153 LVfEKm~GGplLshI~----~~~~F~E~EAs~vvkdia~aLdFlH~-kgIAHRDlKPENiLC~~pn~vsPvKiCDfDLgS 227 (463)
T KOG0607|consen 153 LVFEKMRGGPLLSHIQ----KRKHFNEREASRVVKDIASALDFLHT-KGIAHRDLKPENILCESPNKVSPVKICDFDLGS 227 (463)
T ss_pred EEEecccCchHHHHHH----HhhhccHHHHHHHHHHHHHHHHHHhh-cCcccccCCccceeecCCCCcCceeeecccccc
Confidence 999999875 443332 24679999999999999999999997 99999999999999854332 58999999875
Q ss_pred ccCCC--------CCCccceeccCccCchhhc----CCCCCCcchhhHHHHHHHHHHHhCCCCCCCCChHH---------
Q 011138 289 MLVPG--------EPNISYICSRYYRAPELIF----GATEYTTAIDMWSIGCVLAELLLGQPLFPGESGVD--------- 347 (492)
Q Consensus 289 ~~~~~--------~~~~~~~gt~~y~aPE~~~----~~~~~~~~~DvwSlGvil~ell~G~~pf~~~~~~~--------- 347 (492)
-..-. ....+.+|+..|||||++. ....|+.++|.||||||||.||.|.+||.|.-+.+
T Consensus 228 g~k~~~~~spastP~L~tPvGSAEfMAPEVVd~fv~qA~~YDKrCDlwSLGvIlYImLsGYpPFvG~Cg~dCGWdrGe~C 307 (463)
T KOG0607|consen 228 GIKLNNDCSPASTPELLTPVGSAEFMAPEVVDVFVDQATFYDKRCDLWSLGVILYIMLSGYPPFVGHCGADCGWDRGEVC 307 (463)
T ss_pred ccccCCCCCCCCCccccCcccchhhcchhHHhhhccccccccccccHHHHHHHHHHHHhCCCCccCccCCcCCccCCCcc
Confidence 43211 1234678999999999972 34569999999999999999999999998754321
Q ss_pred ------HHHHHHHHhCCCCHHHHhhcCCCCcccCCCcccCCCcccccCCCCChhHhhhhccccccCCCCcCCHHHhhCCC
Q 011138 348 ------QLVEIIKILGTPTREEIKCMNPNYTEFKFPQIKAHPWHKIFHKRMPPEALDLVSRLLQYSPSLRCTALEACAHP 421 (492)
Q Consensus 348 ------~~~~i~~~~g~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~Li~~~L~~dP~~R~t~~e~l~Hp 421 (492)
.+..|.. ..+.||+. .| ..+|.+++|||+.+|..|+.+|.++.++++||
T Consensus 308 r~CQ~~LFesIQE-----------------GkYeFPdk---dW-----ahIS~eakdlisnLlvrda~~rlsa~~vlnhP 362 (463)
T KOG0607|consen 308 RVCQNKLFESIQE-----------------GKYEFPDK---DW-----AHISSEAKDLISNLLVRDAKQRLSAAQVLNHP 362 (463)
T ss_pred HHHHHHHHHHHhc-----------------cCCcCChh---hh-----HHhhHHHHHHHHHHHhccHHhhhhhhhccCCc
Confidence 1111211 34556552 23 46899999999999999999999999999999
Q ss_pred CCCCCCCC
Q 011138 422 FFDDLRDP 429 (492)
Q Consensus 422 ~f~~~~~~ 429 (492)
|++.+...
T Consensus 363 w~~~~~~e 370 (463)
T KOG0607|consen 363 WVQRCAPE 370 (463)
T ss_pred cccccchh
Confidence 99987643
No 121
>cd05623 STKc_MRCK_alpha Catalytic domain of the Protein Serine/Threonine Kinase, DMPK-related cell division control protein 42 binding kinase alpha. Serine/Threonine Kinases (STKs), DMPK-like subfamily, DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK) alpha isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MRCK is activated via interaction with the small GTPase Cdc42. MRCK/Cdc42 signaling mediates myosin-dependent cell motility. MRCKalpha is expressed ubiquitously in many tissues. It plays a role in the regulation of peripheral actin reorganization and neurite outgrowth. It may also play a role in the transferrin iron uptake pathw
Probab=100.00 E-value=1.3e-43 Score=355.40 Aligned_cols=256 Identities=25% Similarity=0.422 Sum_probs=204.5
Q ss_pred ceeEeeeeccCCceEEEEEEEcCCCCEEEEEEeccch-------hhHHHHHHHHHHcCCCCccccceeeeeccCCCceEE
Q 011138 138 SYMAERVVGTGSFGVVFQAKCLETGDSVAIKKVLQDK-------RYKNRELQIMRLLNHPNVVSLKHCFFSTTEKDELYL 210 (492)
Q Consensus 138 ~y~~~~~lG~G~fg~Vy~~~~~~~g~~vAiK~~~~~~-------~~~~~E~~il~~l~h~nIv~l~~~~~~~~~~~~~~~ 210 (492)
+|.+.+.||+|+||.||++++..+++.||+|++.+.. ....+|+.++..++|+||+++++++ .+...+
T Consensus 2 ~y~~~~~lG~G~fg~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~-----~~~~~~ 76 (332)
T cd05623 2 DFEILKVIGRGAFGEVAVVKLKNADKVFAMKILNKWEMLKRAETACFREERDVLVNGDNQWITTLHYAF-----QDENNL 76 (332)
T ss_pred CceEEEEEEeCCCeEEEEEEECCCCCEEEEEEEeHHHHHHhhHHHHHHHHHHHHhhCCCCCEeeEEEEE-----ecCCEE
Confidence 5899999999999999999999999999999985421 2245788999999999999999988 445568
Q ss_pred EEEeeechhh-HHHHhhhhhhcCCCcCHHHHHHHHHHHHHHHHHHHhhCCcccCCCCCCceEEcCCCCcEEEeeecCccc
Q 011138 211 NLVLEYISET-VYRVSKHYTRMNQHVPILYVQLYTYQICRALNYLHHVVGVCHRDIKPQNLLVNPHTHQLKICDFGSAKM 289 (492)
Q Consensus 211 ~lV~E~~~~~-l~~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~yLH~~~givHrDlKp~NILl~~~~~~vkL~DFG~a~~ 289 (492)
|+||||+.++ +...+. .....+++..++.++.||+.||.|||+ +||+||||||+|||++.++ .+||+|||++..
T Consensus 77 ~lv~ey~~~g~L~~~l~---~~~~~l~~~~~~~~~~qi~~al~~lH~-~~iiHrDlkp~Nili~~~~-~~kL~DfG~a~~ 151 (332)
T cd05623 77 YLVMDYYVGGDLLTLLS---KFEDRLPEDMARFYLAEMVIAIDSVHQ-LHYVHRDIKPDNILMDMNG-HIRLADFGSCLK 151 (332)
T ss_pred EEEEeccCCCcHHHHHH---HhcCCCCHHHHHHHHHHHHHHHHHHHH-CCeEecCCCHHHEEECCCC-CEEEeecchhee
Confidence 9999999864 444432 223568899999999999999999997 9999999999999999887 799999999876
Q ss_pred cCCCCC--CccceeccCccCchhhcC----CCCCCcchhhHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCCHHH
Q 011138 290 LVPGEP--NISYICSRYYRAPELIFG----ATEYTTAIDMWSIGCVLAELLLGQPLFPGESGVDQLVEIIKILGTPTREE 363 (492)
Q Consensus 290 ~~~~~~--~~~~~gt~~y~aPE~~~~----~~~~~~~~DvwSlGvil~ell~G~~pf~~~~~~~~~~~i~~~~g~p~~~~ 363 (492)
...... ....+||+.|+|||++.+ ...++.++|||||||++|||++|+.||.+.+..+.+..+....
T Consensus 152 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DvwSlGvil~ell~g~~Pf~~~~~~~~~~~i~~~~------- 224 (332)
T cd05623 152 LMEDGTVQSSVAVGTPDYISPEILQAMEDGKGKYGPECDWWSLGVCMYEMLYGETPFYAESLVETYGKIMNHK------- 224 (332)
T ss_pred cccCCcceecccccCccccCHHHHhccccCCCCCCCcCCEEeeHHHHHHHhcCCCCCCCCCHHHHHHHHhCCC-------
Confidence 533222 223579999999999862 3458899999999999999999999999887766666554310
Q ss_pred HhhcCCCCcccCCCcccCCCcccccCCCCChhHhhhhccccccCCCC--cCCHHHhhCCCCCCCCC
Q 011138 364 IKCMNPNYTEFKFPQIKAHPWHKIFHKRMPPEALDLVSRLLQYSPSL--RCTALEACAHPFFDDLR 427 (492)
Q Consensus 364 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~Li~~~L~~dP~~--R~t~~e~l~Hp~f~~~~ 427 (492)
..+.+|. ....+++++++||++||..++.+ |+++.++++||||+.+.
T Consensus 225 --------~~~~~p~---------~~~~~s~~~~~li~~ll~~~~~r~~r~~~~~~~~h~~f~~~~ 273 (332)
T cd05623 225 --------ERFQFPA---------QVTDVSEDAKDLIRRLICSREHRLGQNGIEDFKQHPFFTGID 273 (332)
T ss_pred --------ccccCCC---------ccccCCHHHHHHHHHHccChhhhcCCCCHHHHhCCCCcCCCC
Confidence 0111221 11357899999999999765554 68999999999999765
No 122
>PLN00009 cyclin-dependent kinase A; Provisional
Probab=100.00 E-value=1.8e-43 Score=347.93 Aligned_cols=282 Identities=34% Similarity=0.626 Sum_probs=223.0
Q ss_pred cceeEeeeeccCCceEEEEEEEcCCCCEEEEEEeccch------hhHHHHHHHHHHcCCCCccccceeeeeccCCCceEE
Q 011138 137 ISYMAERVVGTGSFGVVFQAKCLETGDSVAIKKVLQDK------RYKNRELQIMRLLNHPNVVSLKHCFFSTTEKDELYL 210 (492)
Q Consensus 137 ~~y~~~~~lG~G~fg~Vy~~~~~~~g~~vAiK~~~~~~------~~~~~E~~il~~l~h~nIv~l~~~~~~~~~~~~~~~ 210 (492)
.+|.+.+.||+|+||.||+|.+..+|+.||||.+.... ....+|+++++.++||||+++++++ .+..+.
T Consensus 2 ~~y~~~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~-----~~~~~~ 76 (294)
T PLN00009 2 DQYEKVEKIGEGTYGVVYKARDRVTNETIALKKIRLEQEDEGVPSTAIREISLLKEMQHGNIVRLQDVV-----HSEKRL 76 (294)
T ss_pred CceEEEEEecCCCCEEEEEEEecCCCcEEEEEehhhccccccchHHHHHHHHHHHhccCCCEeeEEEEE-----ecCCeE
Confidence 35999999999999999999999999999999875321 3355799999999999999999998 444568
Q ss_pred EEEeeechhhHHHHhhhhhhcCCCcCHHHHHHHHHHHHHHHHHHHhhCCcccCCCCCCceEEcCCCCcEEEeeecCcccc
Q 011138 211 NLVLEYISETVYRVSKHYTRMNQHVPILYVQLYTYQICRALNYLHHVVGVCHRDIKPQNLLVNPHTHQLKICDFGSAKML 290 (492)
Q Consensus 211 ~lV~E~~~~~l~~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~yLH~~~givHrDlKp~NILl~~~~~~vkL~DFG~a~~~ 290 (492)
|+||||+++++...+... ....+++..++.++.||+.||+|||+ +||+||||||+||+++.++..+||+|||++...
T Consensus 77 ~lv~e~~~~~l~~~~~~~--~~~~~~~~~~~~~~~qi~~aL~~LH~-~~i~H~dl~p~nill~~~~~~~kl~dfg~~~~~ 153 (294)
T PLN00009 77 YLVFEYLDLDLKKHMDSS--PDFAKNPRLIKTYLYQILRGIAYCHS-HRVLHRDLKPQNLLIDRRTNALKLADFGLARAF 153 (294)
T ss_pred EEEEecccccHHHHHHhC--CCCCcCHHHHHHHHHHHHHHHHHHHh-CCeeCCCCCcceEEEECCCCEEEEccccccccc
Confidence 999999988776654321 22335778888999999999999997 999999999999999865557999999999754
Q ss_pred CCCC-CCccceeccCccCchhhcCCCCCCcchhhHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCCHHHHhhcC-
Q 011138 291 VPGE-PNISYICSRYYRAPELIFGATEYTTAIDMWSIGCVLAELLLGQPLFPGESGVDQLVEIIKILGTPTREEIKCMN- 368 (492)
Q Consensus 291 ~~~~-~~~~~~gt~~y~aPE~~~~~~~~~~~~DvwSlGvil~ell~G~~pf~~~~~~~~~~~i~~~~g~p~~~~~~~~~- 368 (492)
.... ......+++.|+|||.+.+...++.++|||||||++|+|++|.+||...+..+.+.+++..++.|....+....
T Consensus 154 ~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~~Dv~slG~i~~~l~tg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 233 (294)
T PLN00009 154 GIPVRTFTHEVVTLWYRAPEILLGSRHYSTPVDIWSVGCIFAEMVNQKPLFPGDSEIDELFKIFRILGTPNEETWPGVTS 233 (294)
T ss_pred CCCccccccCceeecccCHHHHhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCChhhcccccc
Confidence 3222 22345678999999998776668899999999999999999999999988888888888888888766654221
Q ss_pred -CCCcccCCCcccCCCcccccCCCCChhHhhhhccccccCCCCcCCHHHhhCCCCCCCCCC
Q 011138 369 -PNYTEFKFPQIKAHPWHKIFHKRMPPEALDLVSRLLQYSPSLRCTALEACAHPFFDDLRD 428 (492)
Q Consensus 369 -~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~Li~~~L~~dP~~R~t~~e~l~Hp~f~~~~~ 428 (492)
+.+. ..++..... ......+.+++++.++|.+||+.||++||++.+++.||||.++..
T Consensus 234 ~~~~~-~~~~~~~~~-~~~~~~~~~~~~~~~~i~~~l~~~P~~Rps~~~~l~~~~~~~~~~ 292 (294)
T PLN00009 234 LPDYK-SAFPKWPPK-DLATVVPTLEPAGVDLLSKMLRLDPSKRITARAALEHEYFKDLGD 292 (294)
T ss_pred chhhh-hhcccCCCC-CHHHhCcCCChHHHHHHHHHccCChhhCcCHHHHhcCchHhHHhc
Confidence 1110 011110000 011123457899999999999999999999999999999998753
No 123
>cd05582 STKc_RSK_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, 90 kDa ribosomal protein S6 kinase. Serine/Threonine Kinases (STKs), 90 kDa ribosomal protein S6 kinase (RSK) subfamily, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The RSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. RSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family. They are activated by signaling inputs from extracellular regulated kinase (ERK) and phosphoinositide dependent kinase 1 (PDK1). ERK phosphorylates and activates the CTD of RSK, serving as a docking site for PDK1, which phosphorylates and activates the NTD, which in turn phosphorylate
Probab=100.00 E-value=1.9e-44 Score=359.34 Aligned_cols=244 Identities=29% Similarity=0.487 Sum_probs=199.4
Q ss_pred eeeccCCceEEEEEEE---cCCCCEEEEEEeccch------hhHHHHHHHHHHcCCCCccccceeeeeccCCCceEEEEE
Q 011138 143 RVVGTGSFGVVFQAKC---LETGDSVAIKKVLQDK------RYKNRELQIMRLLNHPNVVSLKHCFFSTTEKDELYLNLV 213 (492)
Q Consensus 143 ~~lG~G~fg~Vy~~~~---~~~g~~vAiK~~~~~~------~~~~~E~~il~~l~h~nIv~l~~~~~~~~~~~~~~~~lV 213 (492)
+.||+|+||.||++++ ..+|+.||+|++.... ....+|+++++.++||||+++++++ .+...+|+|
T Consensus 2 ~~lg~G~~g~Vy~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~-----~~~~~~~lv 76 (318)
T cd05582 2 KVLGQGSFGKVFLVRKITGPDAGQLYAMKVLKKATLKVRDRVRTKMERDILAEVNHPFIVKLHYAF-----QTEGKLYLI 76 (318)
T ss_pred ceeeeCCCEEEEEEEEeccCCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHhCCCCCcccEEEEE-----EcCCEEEEE
Confidence 5799999999999986 3578999999986432 2334699999999999999999988 444568999
Q ss_pred eeechhh-HHHHhhhhhhcCCCcCHHHHHHHHHHHHHHHHHHHhhCCcccCCCCCCceEEcCCCCcEEEeeecCccccCC
Q 011138 214 LEYISET-VYRVSKHYTRMNQHVPILYVQLYTYQICRALNYLHHVVGVCHRDIKPQNLLVNPHTHQLKICDFGSAKMLVP 292 (492)
Q Consensus 214 ~E~~~~~-l~~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~yLH~~~givHrDlKp~NILl~~~~~~vkL~DFG~a~~~~~ 292 (492)
|||+.++ +...+. ....+++..++.++.||+.||.|||+ +||+||||||+|||++.++ .+||+|||+++....
T Consensus 77 ~e~~~~~~L~~~l~----~~~~l~~~~~~~~~~qi~~~l~~lH~-~~i~H~dlkp~Nil~~~~~-~~kL~Dfg~~~~~~~ 150 (318)
T cd05582 77 LDFLRGGDLFTRLS----KEVMFTEEDVKFYLAELALALDHLHS-LGIIYRDLKPENILLDEEG-HIKLTDFGLSKESID 150 (318)
T ss_pred EcCCCCCcHHHHHH----HcCCCCHHHHHHHHHHHHHHHHHHHH-CCEecCCCCHHHeEECCCC-cEEEeeccCCcccCC
Confidence 9999864 443332 24568999999999999999999997 9999999999999999887 799999999976543
Q ss_pred C-CCCccceeccCccCchhhcCCCCCCcchhhHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCCHHHHhhcCCCC
Q 011138 293 G-EPNISYICSRYYRAPELIFGATEYTTAIDMWSIGCVLAELLLGQPLFPGESGVDQLVEIIKILGTPTREEIKCMNPNY 371 (492)
Q Consensus 293 ~-~~~~~~~gt~~y~aPE~~~~~~~~~~~~DvwSlGvil~ell~G~~pf~~~~~~~~~~~i~~~~g~p~~~~~~~~~~~~ 371 (492)
. .......||+.|+|||++.+. .++.++|||||||++|+|++|+.||.+.+..+.+..+.+.
T Consensus 151 ~~~~~~~~~g~~~y~aPE~~~~~-~~~~~~DiwslG~il~el~tg~~p~~~~~~~~~~~~i~~~---------------- 213 (318)
T cd05582 151 HEKKAYSFCGTVEYMAPEVVNRR-GHTQSADWWSFGVLMFEMLTGSLPFQGKDRKETMTMILKA---------------- 213 (318)
T ss_pred CCCceecccCChhhcCHHHHcCC-CCCCccceeccceEeeeeccCCCCCCCCCHHHHHHHHHcC----------------
Confidence 3 233456789999999999654 4789999999999999999999999988776665555331
Q ss_pred cccCCCcccCCCcccccCCCCChhHhhhhccccccCCCCcCC-----HHHhhCCCCCCCCC
Q 011138 372 TEFKFPQIKAHPWHKIFHKRMPPEALDLVSRLLQYSPSLRCT-----ALEACAHPFFDDLR 427 (492)
Q Consensus 372 ~~~~~~~~~~~~~~~~~~~~~s~~~~~Li~~~L~~dP~~R~t-----~~e~l~Hp~f~~~~ 427 (492)
... ++..+++++.+||++||+.||.+||+ +.+++.||||+.+.
T Consensus 214 -~~~------------~p~~~~~~~~~li~~~l~~~P~~R~~a~~~~~~~~~~~~~~~~~~ 261 (318)
T cd05582 214 -KLG------------MPQFLSPEAQSLLRALFKRNPANRLGAGPDGVEEIKRHPFFSTID 261 (318)
T ss_pred -CCC------------CCCCCCHHHHHHHHHHhhcCHhHcCCCCCCCHHHHhCCCCcCCCC
Confidence 111 12347899999999999999999999 67799999998764
No 124
>cd07844 STKc_PCTAIRE_like Catalytic domain of PCTAIRE-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), PCTAIRE-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily share sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. The association of PCTAIRE-like proteins with cyclins has not been widely studied, although PFTAIRE-1 has been shown to function as a CDK which is regulated by cyclin D3 as well as the
Probab=100.00 E-value=2.2e-43 Score=346.68 Aligned_cols=276 Identities=34% Similarity=0.639 Sum_probs=218.0
Q ss_pred cceeEeeeeccCCceEEEEEEEcCCCCEEEEEEeccch-----hhHHHHHHHHHHcCCCCccccceeeeeccCCCceEEE
Q 011138 137 ISYMAERVVGTGSFGVVFQAKCLETGDSVAIKKVLQDK-----RYKNRELQIMRLLNHPNVVSLKHCFFSTTEKDELYLN 211 (492)
Q Consensus 137 ~~y~~~~~lG~G~fg~Vy~~~~~~~g~~vAiK~~~~~~-----~~~~~E~~il~~l~h~nIv~l~~~~~~~~~~~~~~~~ 211 (492)
.+|.+.+.||.|+||.||+|.+..+++.||||.+.... ....+|+.+++.++|+||+++++++ .+..+.|
T Consensus 5 ~~y~~~~~lg~g~~~~vy~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~-----~~~~~~~ 79 (291)
T cd07844 5 ETYKKLDKLGEGSYATVYKGRSKLTGQLVALKEIRLEHEEGAPFTAIREASLLKDLKHANIVTLHDII-----HTKKTLT 79 (291)
T ss_pred cceeEEEEEeecCCeEEEEEEEcCCCcEEEEEEEecccccCCchhHHHHHHHHhhCCCcceeeEEEEE-----ecCCeEE
Confidence 46999999999999999999999999999999885432 2345799999999999999999988 4445789
Q ss_pred EEeeechhhHHHHhhhhhhcCCCcCHHHHHHHHHHHHHHHHHHHhhCCcccCCCCCCceEEcCCCCcEEEeeecCccccC
Q 011138 212 LVLEYISETVYRVSKHYTRMNQHVPILYVQLYTYQICRALNYLHHVVGVCHRDIKPQNLLVNPHTHQLKICDFGSAKMLV 291 (492)
Q Consensus 212 lV~E~~~~~l~~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~yLH~~~givHrDlKp~NILl~~~~~~vkL~DFG~a~~~~ 291 (492)
+||||+.+++...+.. ....+++..++.++.||+.||.|||+ +||+||||||+|||++.++ .+||+|||+++...
T Consensus 80 lv~e~~~~~L~~~~~~---~~~~~~~~~~~~~~~ql~~al~~lH~-~~i~H~dl~p~nil~~~~~-~~kl~dfg~~~~~~ 154 (291)
T cd07844 80 LVFEYLDTDLKQYMDD---CGGGLSMHNVRLFLFQLLRGLAYCHQ-RRVLHRDLKPQNLLISERG-ELKLADFGLARAKS 154 (291)
T ss_pred EEEecCCCCHHHHHHh---CCCCCCHHHHHHHHHHHHHHHHHHHh-CCeecccCCHHHEEEcCCC-CEEECccccccccC
Confidence 9999999877665432 23467889999999999999999997 8999999999999999887 79999999986542
Q ss_pred CC-CCCccceeccCccCchhhcCCCCCCcchhhHHHHHHHHHHHhCCCCCCCCC-hHHHHHHHHHHhCCCCHHHHhhcCC
Q 011138 292 PG-EPNISYICSRYYRAPELIFGATEYTTAIDMWSIGCVLAELLLGQPLFPGES-GVDQLVEIIKILGTPTREEIKCMNP 369 (492)
Q Consensus 292 ~~-~~~~~~~gt~~y~aPE~~~~~~~~~~~~DvwSlGvil~ell~G~~pf~~~~-~~~~~~~i~~~~g~p~~~~~~~~~~ 369 (492)
.. .......++..|+|||++.+...++.++||||+||++|+|++|..||.+.. ..+++..+.+.++.+....+.....
T Consensus 155 ~~~~~~~~~~~~~~~~aPE~~~~~~~~~~~~Dv~slG~il~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 234 (291)
T cd07844 155 VPSKTYSNEVVTLWYRPPDVLLGSTEYSTSLDMWGVGCIFYEMATGRPLFPGSTDVEDQLHKIFRVLGTPTEETWPGVSS 234 (291)
T ss_pred CCCccccccccccccCCcHHhhcCcccCcHHHHHHHHHHHHHHHhCCCCCCCCccHHHHHHHHHHhcCCCChhhhhhhhh
Confidence 21 112234568899999998776668999999999999999999999998766 5667777888888887776654322
Q ss_pred C--CcccCCCcccCCCcccccCCCCC--hhHhhhhccccccCCCCcCCHHHhhCCCCC
Q 011138 370 N--YTEFKFPQIKAHPWHKIFHKRMP--PEALDLVSRLLQYSPSLRCTALEACAHPFF 423 (492)
Q Consensus 370 ~--~~~~~~~~~~~~~~~~~~~~~~s--~~~~~Li~~~L~~dP~~R~t~~e~l~Hp~f 423 (492)
. +....++.....+....+ ..++ .++.++|.+||+.||.+|||+.++++||||
T Consensus 235 ~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~li~~~L~~~p~~Rps~~e~l~~~~f 291 (291)
T cd07844 235 NPEFKPYSFPFYPPRPLINHA-PRLDRIPHGEELALKFLQYEPKKRISAAEAMKHPYF 291 (291)
T ss_pred ccccccccccccCChhHHHhC-cCCCCchhHHHHHHHHhccCcccccCHHHHhcCCCC
Confidence 1 222222221111111111 2344 889999999999999999999999999998
No 125
>cd07860 STKc_CDK2_3 Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase 2 and 3. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 2 (CDK2) and CDK3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK2/3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK2 is regulated by cyclin E or cyclin A. Upon activation by cyclin E, it phosphorylates the retinoblastoma (pRb) protein which activates E2F mediated transcription and allows cells to move into S phase. The CDK2/cyclin A complex
Probab=100.00 E-value=1.4e-43 Score=346.65 Aligned_cols=275 Identities=35% Similarity=0.660 Sum_probs=219.0
Q ss_pred ceeEeeeeccCCceEEEEEEEcCCCCEEEEEEeccch------hhHHHHHHHHHHcCCCCccccceeeeeccCCCceEEE
Q 011138 138 SYMAERVVGTGSFGVVFQAKCLETGDSVAIKKVLQDK------RYKNRELQIMRLLNHPNVVSLKHCFFSTTEKDELYLN 211 (492)
Q Consensus 138 ~y~~~~~lG~G~fg~Vy~~~~~~~g~~vAiK~~~~~~------~~~~~E~~il~~l~h~nIv~l~~~~~~~~~~~~~~~~ 211 (492)
+|.+.+.||.|+||.||+|++..+|+.||||.+..+. ....+|+++++.++||||+++++++ .+....+
T Consensus 1 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~-----~~~~~~~ 75 (284)
T cd07860 1 NFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDVI-----HTENKLY 75 (284)
T ss_pred CceeeeeecCCCceEEEEEEECCCCCEEEEEEccccccccccchHHHHHHHHHHhcCCCCCcchhhhc-----ccCCcEE
Confidence 3889999999999999999999999999999885332 2456799999999999999999988 4445689
Q ss_pred EEeeechhhHHHHhhhhhhcCCCcCHHHHHHHHHHHHHHHHHHHhhCCcccCCCCCCceEEcCCCCcEEEeeecCccccC
Q 011138 212 LVLEYISETVYRVSKHYTRMNQHVPILYVQLYTYQICRALNYLHHVVGVCHRDIKPQNLLVNPHTHQLKICDFGSAKMLV 291 (492)
Q Consensus 212 lV~E~~~~~l~~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~yLH~~~givHrDlKp~NILl~~~~~~vkL~DFG~a~~~~ 291 (492)
+||||+.+++...+.. .....+++..+..++.||+.||+|||+ +|++||||+|+||+++.++ .+||+|||++....
T Consensus 76 ~v~e~~~~~l~~~~~~--~~~~~l~~~~~~~~~~~i~~~l~~lh~-~~i~H~~l~p~nill~~~~-~~~l~dfg~~~~~~ 151 (284)
T cd07860 76 LVFEFLHQDLKKFMDA--SPLSGIPLPLIKSYLFQLLQGLAFCHS-HRVLHRDLKPQNLLINTEG-AIKLADFGLARAFG 151 (284)
T ss_pred EEeeccccCHHHHHHh--CCCCCCCHHHHHHHHHHHHHHHHHHHH-CCeecCCCCHHHEEECCCC-CEEEeeccchhhcc
Confidence 9999998776655432 123568899999999999999999997 9999999999999999887 79999999987653
Q ss_pred CCC-CCccceeccCccCchhhcCCCCCCcchhhHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCCHHHHhhcC--
Q 011138 292 PGE-PNISYICSRYYRAPELIFGATEYTTAIDMWSIGCVLAELLLGQPLFPGESGVDQLVEIIKILGTPTREEIKCMN-- 368 (492)
Q Consensus 292 ~~~-~~~~~~gt~~y~aPE~~~~~~~~~~~~DvwSlGvil~ell~G~~pf~~~~~~~~~~~i~~~~g~p~~~~~~~~~-- 368 (492)
... ......+++.|+|||++.+...++.++|||||||++|+|++|+.||.+.+..+.+.++.+..+.+....+....
T Consensus 152 ~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~il~~l~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 231 (284)
T cd07860 152 VPVRTYTHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSL 231 (284)
T ss_pred cCccccccccccccccCCeEEecCCCCCcHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHhCCCChhhhhhhhHH
Confidence 322 22334678899999998776667889999999999999999999999998888888888888887655432211
Q ss_pred CCCcccCCCcccCCCcccccCCCCChhHhhhhccccccCCCCcCCHHHhhCCCCC
Q 011138 369 PNYTEFKFPQIKAHPWHKIFHKRMPPEALDLVSRLLQYSPSLRCTALEACAHPFF 423 (492)
Q Consensus 369 ~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~Li~~~L~~dP~~R~t~~e~l~Hp~f 423 (492)
+.+ ...++......... ..+.+++++++||.+||+.||.+|||+.+++.||||
T Consensus 232 ~~~-~~~~~~~~~~~~~~-~~~~~~~~~~~li~~~l~~~P~~Rpt~~~~l~~~~f 284 (284)
T cd07860 232 PDY-KPSFPKWARQDFSK-VVPPLDEDGRDLLSQMLHYDPNKRISAKAALAHPFF 284 (284)
T ss_pred HHH-HhhcccccccCHHH-HcccCCHHHHHHHHHhcCCCcccCCCHHHHhcCCCC
Confidence 000 01122211111111 123578899999999999999999999999999998
No 126
>cd05615 STKc_cPKC_alpha Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C alpha. Serine/Threonine Kinases (STKs), Classical Protein Kinase C (cPKC) subfamily, alpha isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. There are four cPKC isoforms, named alpha, betaI, betaII, a
Probab=100.00 E-value=1.3e-43 Score=354.00 Aligned_cols=248 Identities=27% Similarity=0.442 Sum_probs=200.9
Q ss_pred eeEeeeeccCCceEEEEEEEcCCCCEEEEEEeccch-------hhHHHHHHHHHHcC-CCCccccceeeeeccCCCceEE
Q 011138 139 YMAERVVGTGSFGVVFQAKCLETGDSVAIKKVLQDK-------RYKNRELQIMRLLN-HPNVVSLKHCFFSTTEKDELYL 210 (492)
Q Consensus 139 y~~~~~lG~G~fg~Vy~~~~~~~g~~vAiK~~~~~~-------~~~~~E~~il~~l~-h~nIv~l~~~~~~~~~~~~~~~ 210 (492)
|...+.||+|+||.||+|.++.+|+.||||++.++. .....|..+++.+. |++|+++++++ .+...+
T Consensus 2 f~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~i~~~~~~~-----~~~~~~ 76 (323)
T cd05615 2 FNFLMVLGKGSFGKVMLAERKGTDELYAIKILKKDVVIQDDDVECTMVEKRVLALQDKPPFLTQLHSCF-----QTVDRL 76 (323)
T ss_pred ceEEEEEEecCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhccCCCchhheeeEE-----ecCCEE
Confidence 778899999999999999999999999999886432 22346888888886 56777888887 444468
Q ss_pred EEEeeechhh-HHHHhhhhhhcCCCcCHHHHHHHHHHHHHHHHHHHhhCCcccCCCCCCceEEcCCCCcEEEeeecCccc
Q 011138 211 NLVLEYISET-VYRVSKHYTRMNQHVPILYVQLYTYQICRALNYLHHVVGVCHRDIKPQNLLVNPHTHQLKICDFGSAKM 289 (492)
Q Consensus 211 ~lV~E~~~~~-l~~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~yLH~~~givHrDlKp~NILl~~~~~~vkL~DFG~a~~ 289 (492)
|+||||++++ +...+ .....+++..+..++.||+.||.|||+ +||+||||||+|||++.++ .+||+|||+++.
T Consensus 77 ~lv~Ey~~~g~L~~~i----~~~~~l~~~~~~~i~~qi~~al~~lH~-~~ivHrDikp~Nill~~~~-~ikL~Dfg~~~~ 150 (323)
T cd05615 77 YFVMEYVNGGDLMYHI----QQVGKFKEPQAVFYAAEISVGLFFLHR-RGIIYRDLKLDNVMLDSEG-HIKIADFGMCKE 150 (323)
T ss_pred EEEEcCCCCCcHHHHH----HHcCCCCHHHHHHHHHHHHHHHHHHHH-CCeeccCCCHHHeEECCCC-CEEEeccccccc
Confidence 9999999865 33332 223568999999999999999999997 9999999999999999887 799999999875
Q ss_pred cCCC-CCCccceeccCccCchhhcCCCCCCcchhhHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCCHHHHhhcC
Q 011138 290 LVPG-EPNISYICSRYYRAPELIFGATEYTTAIDMWSIGCVLAELLLGQPLFPGESGVDQLVEIIKILGTPTREEIKCMN 368 (492)
Q Consensus 290 ~~~~-~~~~~~~gt~~y~aPE~~~~~~~~~~~~DvwSlGvil~ell~G~~pf~~~~~~~~~~~i~~~~g~p~~~~~~~~~ 368 (492)
.... .......||+.|+|||++.+. .++.++|||||||++|+|++|.+||.+.+....+..+...
T Consensus 151 ~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~~DiwslGvil~elltG~~pf~~~~~~~~~~~i~~~------------- 216 (323)
T cd05615 151 HMVDGVTTRTFCGTPDYIAPEIIAYQ-PYGKSVDWWAYGVLLYEMLAGQPPFDGEDEDELFQSIMEH------------- 216 (323)
T ss_pred cCCCCccccCccCCccccCHHHHcCC-CCCCccchhhhHHHHHHHHhCCCCCCCCCHHHHHHHHHhC-------------
Confidence 4322 223346799999999999654 4899999999999999999999999988766655555431
Q ss_pred CCCcccCCCcccCCCcccccCCCCChhHhhhhccccccCCCCcCC-----HHHhhCCCCCCCCC
Q 011138 369 PNYTEFKFPQIKAHPWHKIFHKRMPPEALDLVSRLLQYSPSLRCT-----ALEACAHPFFDDLR 427 (492)
Q Consensus 369 ~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~Li~~~L~~dP~~R~t-----~~e~l~Hp~f~~~~ 427 (492)
... ++..++.++.+|+.+||+.||.+|++ ..++++||||+.+.
T Consensus 217 ----~~~------------~p~~~~~~~~~li~~~l~~~p~~R~~~~~~~~~~i~~h~~f~~~~ 264 (323)
T cd05615 217 ----NVS------------YPKSLSKEAVSICKGLMTKHPSKRLGCGPEGERDIREHAFFRRID 264 (323)
T ss_pred ----CCC------------CCccCCHHHHHHHHHHcccCHhhCCCCCCCCHHHHhcCcccCCCC
Confidence 111 22357889999999999999999997 47899999999764
No 127
>cd07855 STKc_ERK5 Catalytic domain of the Serine/Threonine Kinase, Extracellular signal-Regulated Kinase 5. Serine/Threonine Kinases (STKs), Extracellular signal-Regulated Kinase 5 (ERK5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ERK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. ERK5, also called Big MAPK1 (BMK1) or MAPK7, has a unique C-terminal extension, making it approximately twice as big as other MAPKs. This extension contains transcriptional activation capability which is inhibited by the N-terminal half. ERK5 is activated in response to growth factors and stress by a cascade that leads to its phosphorylation by the
Probab=100.00 E-value=1.6e-43 Score=354.98 Aligned_cols=288 Identities=36% Similarity=0.660 Sum_probs=230.8
Q ss_pred cceeEeeeeccCCceEEEEEEEcCCCCEEEEEEeccch------hhHHHHHHHHHHcCCCCccccceeeeeccCCCceEE
Q 011138 137 ISYMAERVVGTGSFGVVFQAKCLETGDSVAIKKVLQDK------RYKNRELQIMRLLNHPNVVSLKHCFFSTTEKDELYL 210 (492)
Q Consensus 137 ~~y~~~~~lG~G~fg~Vy~~~~~~~g~~vAiK~~~~~~------~~~~~E~~il~~l~h~nIv~l~~~~~~~~~~~~~~~ 210 (492)
.+|.+.+.||.|+||.||+|.+..+|+.||+|++.... ....+|+.+++.++||||++++++|.... .+..++
T Consensus 5 ~~y~~~~~lg~g~~g~v~~~~~~~~~~~valK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~-~~~~~~ 83 (334)
T cd07855 5 SRYKPIENIGSGAYGVVCSAIDTRSGKKVAIKKIPHAFDVPTLAKRTLRELKILRHFKHDNIIAIRDILRPPG-ADFKDV 83 (334)
T ss_pred hceeeeeeeecCCCeEEEEEEEcCCCCEEEEEEeccccccccchHHHHHHHHHHHhcCCCCccCHHHhccccC-CCCceE
Confidence 46999999999999999999999999999999885431 23447999999999999999999875433 344578
Q ss_pred EEEeeechhhHHHHhhhhhhcCCCcCHHHHHHHHHHHHHHHHHHHhhCCcccCCCCCCceEEcCCCCcEEEeeecCcccc
Q 011138 211 NLVLEYISETVYRVSKHYTRMNQHVPILYVQLYTYQICRALNYLHHVVGVCHRDIKPQNLLVNPHTHQLKICDFGSAKML 290 (492)
Q Consensus 211 ~lV~E~~~~~l~~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~yLH~~~givHrDlKp~NILl~~~~~~vkL~DFG~a~~~ 290 (492)
|+||||+.+++...+. ....+++..++.++.||+.||.|||+ +||+||||||+||+++.++ .+||+|||++...
T Consensus 84 ~lv~e~~~~~l~~~~~----~~~~~~~~~~~~i~~qi~~aL~~LH~-~~ivH~dlkp~Nil~~~~~-~~kl~dfg~~~~~ 157 (334)
T cd07855 84 YVVMDLMESDLHHIIH----SDQPLTEEHIRYFLYQLLRGLKYIHS-ANVIHRDLKPSNLLVNEDC-ELRIGDFGMARGL 157 (334)
T ss_pred EEEEehhhhhHHHHhc----cCCCCCHHHHHHHHHHHHHHHHHHHH-CCeecCCCCHHHEEEcCCC-cEEecccccceee
Confidence 9999999887665543 24558999999999999999999997 9999999999999999888 7999999998765
Q ss_pred CCCCC-----CccceeccCccCchhhcCCCCCCcchhhHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCCHHHHh
Q 011138 291 VPGEP-----NISYICSRYYRAPELIFGATEYTTAIDMWSIGCVLAELLLGQPLFPGESGVDQLVEIIKILGTPTREEIK 365 (492)
Q Consensus 291 ~~~~~-----~~~~~gt~~y~aPE~~~~~~~~~~~~DvwSlGvil~ell~G~~pf~~~~~~~~~~~i~~~~g~p~~~~~~ 365 (492)
..... .....|+..|+|||++.+...++.++|||||||++|+|++|++||.+.+...++..+...+|.|+...+.
T Consensus 158 ~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~~Di~slG~~l~el~~g~~pf~~~~~~~~~~~~~~~~g~~~~~~~~ 237 (334)
T cd07855 158 SSSPTEHKYFMTEYVATRWYRAPELLLSLPEYTTAIDMWSVGCIFAEMLGRRQLFPGKNYVHQLKLILSVLGSPSEEVLN 237 (334)
T ss_pred cccCcCCCcccccccccccccChHHhcCCcccccccchHHHHHHHHHHHcCCCccCCCChHHHHHHHHHHhCCChhHhhh
Confidence 32221 1245789999999998665568999999999999999999999999999888899999999998877654
Q ss_pred hcCCCCcc---cCCCcccCCCcccccCCCCChhHhhhhccccccCCCCcCCHHHhhCCCCCCCCCCCCCC
Q 011138 366 CMNPNYTE---FKFPQIKAHPWHKIFHKRMPPEALDLVSRLLQYSPSLRCTALEACAHPFFDDLRDPNTC 432 (492)
Q Consensus 366 ~~~~~~~~---~~~~~~~~~~~~~~~~~~~s~~~~~Li~~~L~~dP~~R~t~~e~l~Hp~f~~~~~~~~~ 432 (492)
........ ..++.....+|.. +.+.+++++.+||++||+.||.+||++.++++||||.....+...
T Consensus 238 ~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~li~~~l~~~P~~Rpt~~~~l~~~~~~~~~~~~~~ 306 (334)
T cd07855 238 RIGSDRVRKYIQNLPRKQPVPWSK-IFPKASPEALDLLSQMLQFDPEERITVEQALQHPFLAQYHDPDDE 306 (334)
T ss_pred hhchhhHHHHHhhcccCCCCCHHH-HcccCCHHHHHHHHHHccCChhhCcCHHHHHhChhhhhccCCccc
Confidence 32211100 0122222223322 224578999999999999999999999999999999988776553
No 128
>KOG0596 consensus Dual specificity; serine/threonine and tyrosine kinase [Cell cycle control, cell division, chromosome partitioning]
Probab=100.00 E-value=7.8e-44 Score=352.04 Aligned_cols=252 Identities=26% Similarity=0.446 Sum_probs=198.6
Q ss_pred ceeEeeeeccCCceEEEEEEEcCCCCEEEEEEeccch------hhHHHHHHHHHHcC-CCCccccceeeeeccCCCceEE
Q 011138 138 SYMAERVVGTGSFGVVFQAKCLETGDSVAIKKVLQDK------RYKNRELQIMRLLN-HPNVVSLKHCFFSTTEKDELYL 210 (492)
Q Consensus 138 ~y~~~~~lG~G~fg~Vy~~~~~~~g~~vAiK~~~~~~------~~~~~E~~il~~l~-h~nIv~l~~~~~~~~~~~~~~~ 210 (492)
.|++.+.||+||-+.||++.. .+.+.||+|++.... ....+|+..|.+|+ |.+||+||+|= -.+.++
T Consensus 362 ~Yeilk~iG~GGSSkV~kV~~-s~~~iyalkkv~~~~~D~qtl~gy~nEI~lL~KLkg~~~IIqL~DYE-----v~d~~l 435 (677)
T KOG0596|consen 362 EYEILKQIGSGGSSKVFKVLN-SDKQIYALKKVVLLEADNQTLDGYRNEIALLNKLKGHDKIIQLYDYE-----VTDGYL 435 (677)
T ss_pred hhhHHHhhcCCCcceeeeeec-CCCcchhhhHHHHhhcCHHHHHHHHHHHHHHHHhcCCceEEEEeeee-----ccCceE
Confidence 599999999999999999985 445667777663322 23458999999996 99999999986 446689
Q ss_pred EEEeeechhhHHHHhhhhhhcCCCcCHHHHHHHHHHHHHHHHHHHhhCCcccCCCCCCceEEcCCCCcEEEeeecCcccc
Q 011138 211 NLVLEYISETVYRVSKHYTRMNQHVPILYVQLYTYQICRALNYLHHVVGVCHRDIKPQNLLVNPHTHQLKICDFGSAKML 290 (492)
Q Consensus 211 ~lV~E~~~~~l~~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~yLH~~~givHrDlKp~NILl~~~~~~vkL~DFG~a~~~ 290 (492)
||||||.+.+|-.++.... ...+...++.|..||+.|+.++|+ +||||.||||.|+|+-+ | .+||+|||+|..+
T Consensus 436 YmvmE~Gd~DL~kiL~k~~---~~~~~~~lk~ywkqML~aV~~IH~-~gIVHSDLKPANFLlVk-G-~LKLIDFGIA~aI 509 (677)
T KOG0596|consen 436 YMVMECGDIDLNKILKKKK---SIDPDWFLKFYWKQMLLAVKTIHQ-HGIVHSDLKPANFLLVK-G-RLKLIDFGIANAI 509 (677)
T ss_pred EEEeecccccHHHHHHhcc---CCCchHHHHHHHHHHHHHHHHHHH-hceeecCCCcccEEEEe-e-eEEeeeechhccc
Confidence 9999999988887766533 334445899999999999999998 99999999999999984 4 6999999999988
Q ss_pred CCCCCC---ccceeccCccCchhhcCCC----------CCCcchhhHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhC
Q 011138 291 VPGEPN---ISYICSRYYRAPELIFGAT----------EYTTAIDMWSIGCVLAELLLGQPLFPGESGVDQLVEIIKILG 357 (492)
Q Consensus 291 ~~~~~~---~~~~gt~~y~aPE~~~~~~----------~~~~~~DvwSlGvil~ell~G~~pf~~~~~~~~~~~i~~~~g 357 (492)
.++... .+.+||+.||+||.+.... ..++++||||||||||+|+.|++||....+ .+.++ ..+.
T Consensus 510 ~~DTTsI~kdsQvGT~NYMsPEAl~~~~s~~~~~~~k~Ki~r~SDvWSLGCILYqMvYgktPf~~~~n--~~aKl-~aI~ 586 (677)
T KOG0596|consen 510 QPDTTSIVKDSQVGTVNYMSPEALTDMSSSRENGKSKIKISRKSDVWSLGCILYQMVYGKTPFGQIIN--QIAKL-HAIT 586 (677)
T ss_pred CccccceeeccccCcccccCHHHHhhccccccCCCcceeecCccchhhhhhHHHHHHhcCCchHHHHH--HHHHH-Hhhc
Confidence 766543 3679999999999984321 256799999999999999999999965431 11221 1122
Q ss_pred CCCHHHHhhcCCCCcccCCCcccCCCcccccCCCCChhHhhhhccccccCCCCcCCHHHhhCCCCCCCC
Q 011138 358 TPTREEIKCMNPNYTEFKFPQIKAHPWHKIFHKRMPPEALDLVSRLLQYSPSLRCTALEACAHPFFDDL 426 (492)
Q Consensus 358 ~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~Li~~~L~~dP~~R~t~~e~l~Hp~f~~~ 426 (492)
.| + .++.||.+.. ..++.++++.||..||.+||++.++|+|||++-.
T Consensus 587 ~P----------~-~~Iefp~~~~-----------~~~li~~mK~CL~rdPkkR~si~eLLqhpFl~~~ 633 (677)
T KOG0596|consen 587 DP----------N-HEIEFPDIPE-----------NDELIDVMKCCLARDPKKRWSIPELLQHPFLQIQ 633 (677)
T ss_pred CC----------C-ccccccCCCC-----------chHHHHHHHHHHhcCcccCCCcHHHhcCcccccc
Confidence 22 1 4566666432 2349999999999999999999999999999864
No 129
>cd05602 STKc_SGK1 Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 1. Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3. SGK1 is ubiquitously expressed and is under transcriptional control of numerous stimuli including cell stress (cell shrinkage), serum, hormones (gluco- and mineralocorticoids), gonadotropins, growth factors, interleukin-6, and other cytokines. It plays roles in sodium retention and potassium elimination in the kidney, nutrient transport, salt
Probab=100.00 E-value=7.9e-44 Score=355.91 Aligned_cols=244 Identities=27% Similarity=0.441 Sum_probs=195.9
Q ss_pred eeeccCCceEEEEEEEcCCCCEEEEEEeccchh-------hHHHH-HHHHHHcCCCCccccceeeeeccCCCceEEEEEe
Q 011138 143 RVVGTGSFGVVFQAKCLETGDSVAIKKVLQDKR-------YKNRE-LQIMRLLNHPNVVSLKHCFFSTTEKDELYLNLVL 214 (492)
Q Consensus 143 ~~lG~G~fg~Vy~~~~~~~g~~vAiK~~~~~~~-------~~~~E-~~il~~l~h~nIv~l~~~~~~~~~~~~~~~~lV~ 214 (492)
+.||+|+||+||+|++..+++.||+|++..... ...+| ..+++.++||||+++++++ .+...+|+||
T Consensus 1 ~~lg~G~fg~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~l~~~~h~~Iv~~~~~~-----~~~~~~~lv~ 75 (325)
T cd05602 1 KVIGKGSFGKVLLARHKAEEKFYAVKVLQKKAILKKKEEKHIMSERNVLLKNVKHPFLVGLHFSF-----QTADKLYFVL 75 (325)
T ss_pred CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHHHhhhHHHHHHHHHHHHHHhCCCCCCCceeEEE-----EcCCeEEEEE
Confidence 369999999999999999999999999864321 11223 3457889999999999988 4445689999
Q ss_pred eechhhHH-HHhhhhhhcCCCcCHHHHHHHHHHHHHHHHHHHhhCCcccCCCCCCceEEcCCCCcEEEeeecCccccCC-
Q 011138 215 EYISETVY-RVSKHYTRMNQHVPILYVQLYTYQICRALNYLHHVVGVCHRDIKPQNLLVNPHTHQLKICDFGSAKMLVP- 292 (492)
Q Consensus 215 E~~~~~l~-~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~yLH~~~givHrDlKp~NILl~~~~~~vkL~DFG~a~~~~~- 292 (492)
||+.++.+ ..+. ....+++..++.++.||+.||.|||+ +||+||||||+|||++.++ .+||+|||+++....
T Consensus 76 e~~~~~~L~~~~~----~~~~~~~~~~~~~~~qi~~~L~~lH~-~giiHrDlkp~Nili~~~~-~~kl~DfG~a~~~~~~ 149 (325)
T cd05602 76 DYINGGELFYHLQ----RERCFLEPRARFYAAEIASALGYLHS-LNIVYRDLKPENILLDSQG-HIVLTDFGLCKENIEH 149 (325)
T ss_pred eCCCCCcHHHHHH----hcCCCCHHHHHHHHHHHHHHHHHHHH-CCeEecCCCHHHeEECCCC-CEEEccCCCCcccccC
Confidence 99987543 3322 24567888899999999999999997 9999999999999999887 799999999875422
Q ss_pred CCCCccceeccCccCchhhcCCCCCCcchhhHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCCHHHHhhcCCCCc
Q 011138 293 GEPNISYICSRYYRAPELIFGATEYTTAIDMWSIGCVLAELLLGQPLFPGESGVDQLVEIIKILGTPTREEIKCMNPNYT 372 (492)
Q Consensus 293 ~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DvwSlGvil~ell~G~~pf~~~~~~~~~~~i~~~~g~p~~~~~~~~~~~~~ 372 (492)
.......+||+.|+|||++.+. .++.++|||||||++|+|++|.+||.+.+..+.+..+...
T Consensus 150 ~~~~~~~~gt~~y~aPE~~~~~-~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~i~~~----------------- 211 (325)
T cd05602 150 NGTTSTFCGTPEYLAPEVLHKQ-PYDRTVDWWCLGAVLYEMLYGLPPFYSRNTAEMYDNILNK----------------- 211 (325)
T ss_pred CCCcccccCCccccCHHHHcCC-CCCCccccccccHHHHHHhcCCCCCCCCCHHHHHHHHHhC-----------------
Confidence 2233456799999999999654 4899999999999999999999999988776655554331
Q ss_pred ccCCCcccCCCcccccCCCCChhHhhhhccccccCCCCcCCHH----HhhCCCCCCCCC
Q 011138 373 EFKFPQIKAHPWHKIFHKRMPPEALDLVSRLLQYSPSLRCTAL----EACAHPFFDDLR 427 (492)
Q Consensus 373 ~~~~~~~~~~~~~~~~~~~~s~~~~~Li~~~L~~dP~~R~t~~----e~l~Hp~f~~~~ 427 (492)
... +.+.+++++.+||.+||+.||.+|+++. ++++|+||..+.
T Consensus 212 ~~~------------~~~~~~~~~~~li~~~l~~~p~~R~~~~~~~~~i~~~~~~~~~~ 258 (325)
T cd05602 212 PLQ------------LKPNITNSARHLLEGLLQKDRTKRLGAKDDFMEIKNHIFFSPIN 258 (325)
T ss_pred CcC------------CCCCCCHHHHHHHHHHcccCHHHCCCCCCCHHHHhcCcccCCCC
Confidence 000 2245789999999999999999999876 899999998653
No 130
>cd05604 STKc_SGK3 Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 3. Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK3 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3 (also called cytokine-independent survival kinase CISK). SGK3 is expressed in most tissues and is most abundant in the embryo and adult heart and spleen. It was originally discovered in a screen for antiapoptotic genes. It phosphorylates and inhibits the proapoptotic proteins, Bad and FKHRL1. SGK3 also regulates many transporters, ion channels,
Probab=100.00 E-value=4.4e-44 Score=357.73 Aligned_cols=245 Identities=28% Similarity=0.483 Sum_probs=195.9
Q ss_pred eeeccCCceEEEEEEEcCCCCEEEEEEeccch-------hhHHHHH-HHHHHcCCCCccccceeeeeccCCCceEEEEEe
Q 011138 143 RVVGTGSFGVVFQAKCLETGDSVAIKKVLQDK-------RYKNREL-QIMRLLNHPNVVSLKHCFFSTTEKDELYLNLVL 214 (492)
Q Consensus 143 ~~lG~G~fg~Vy~~~~~~~g~~vAiK~~~~~~-------~~~~~E~-~il~~l~h~nIv~l~~~~~~~~~~~~~~~~lV~ 214 (492)
+.||+|+||.||+|++..+|+.||||++.+.. ....+|. .+++.++||||+++++++ .....+|+||
T Consensus 1 ~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~l~~~~hp~iv~~~~~~-----~~~~~~~lv~ 75 (325)
T cd05604 1 KVIGKGSFGKVLLAKRKLDGKCYAVKVLQKKIVLNRKEQKHIMAERNVLLKNVKHPFLVGLHYSF-----QTTEKLYFVL 75 (325)
T ss_pred CceeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHHhCCCCCCccEEEEE-----ecCCEEEEEE
Confidence 36999999999999999999999999985431 1122343 357789999999999888 4445689999
Q ss_pred eechhhHHHHhhhhhhcCCCcCHHHHHHHHHHHHHHHHHHHhhCCcccCCCCCCceEEcCCCCcEEEeeecCccccCC-C
Q 011138 215 EYISETVYRVSKHYTRMNQHVPILYVQLYTYQICRALNYLHHVVGVCHRDIKPQNLLVNPHTHQLKICDFGSAKMLVP-G 293 (492)
Q Consensus 215 E~~~~~l~~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~yLH~~~givHrDlKp~NILl~~~~~~vkL~DFG~a~~~~~-~ 293 (492)
||+.++.+... ......+++..++.++.||+.||.|||+ +||+||||||+|||++.++ .+||+|||+++.... .
T Consensus 76 e~~~~~~L~~~---l~~~~~~~~~~~~~~~~qi~~al~~lH~-~givH~Dlkp~NIll~~~~-~~kL~DfG~~~~~~~~~ 150 (325)
T cd05604 76 DFVNGGELFFH---LQRERSFPEPRARFYAAEIASALGYLHS-INIVYRDLKPENILLDSQG-HVVLTDFGLCKEGIAQS 150 (325)
T ss_pred cCCCCCCHHHH---HHHcCCCCHHHHHHHHHHHHHHHHHHHH-CCeeecCCCHHHeEECCCC-CEEEeecCCcccCCCCC
Confidence 99987644321 1234578999999999999999999997 9999999999999999888 799999999875422 2
Q ss_pred CCCccceeccCccCchhhcCCCCCCcchhhHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCCHHHHhhcCCCCcc
Q 011138 294 EPNISYICSRYYRAPELIFGATEYTTAIDMWSIGCVLAELLLGQPLFPGESGVDQLVEIIKILGTPTREEIKCMNPNYTE 373 (492)
Q Consensus 294 ~~~~~~~gt~~y~aPE~~~~~~~~~~~~DvwSlGvil~ell~G~~pf~~~~~~~~~~~i~~~~g~p~~~~~~~~~~~~~~ 373 (492)
......+||+.|+|||++.+. .++.++|||||||++|+|++|.+||.+.+..+.+..+... .
T Consensus 151 ~~~~~~~gt~~y~aPE~~~~~-~~~~~~DvwslG~il~el~~G~~pf~~~~~~~~~~~~~~~-----------------~ 212 (325)
T cd05604 151 DTTTTFCGTPEYLAPEVIRKQ-PYDNTVDWWCLGAVLYEMLYGLPPFYCRDVAEMYDNILHK-----------------P 212 (325)
T ss_pred CCcccccCChhhCCHHHHcCC-CCCCcCccccccceehhhhcCCCCCCCCCHHHHHHHHHcC-----------------C
Confidence 233456799999999999654 4899999999999999999999999987766555544331 0
Q ss_pred cCCCcccCCCcccccCCCCChhHhhhhccccccCCCCcCCH----HHhhCCCCCCCCC
Q 011138 374 FKFPQIKAHPWHKIFHKRMPPEALDLVSRLLQYSPSLRCTA----LEACAHPFFDDLR 427 (492)
Q Consensus 374 ~~~~~~~~~~~~~~~~~~~s~~~~~Li~~~L~~dP~~R~t~----~e~l~Hp~f~~~~ 427 (492)
. .+.+.++.++.++|++||+.||.+||++ .+++.||||....
T Consensus 213 ~------------~~~~~~~~~~~~ll~~ll~~~p~~R~~~~~~~~~i~~h~~f~~~~ 258 (325)
T cd05604 213 L------------VLRPGASLTAWSILEELLEKDRQRRLGAKEDFLEIQEHPFFESLS 258 (325)
T ss_pred c------------cCCCCCCHHHHHHHHHHhccCHHhcCCCCCCHHHHhcCCCcCCCC
Confidence 0 0123478899999999999999999987 5899999999754
No 131
>cd05630 STKc_GRK6 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 6. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK6 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK6 is widely expressed in many tissues. t is expressed as
Probab=100.00 E-value=1.5e-43 Score=347.22 Aligned_cols=254 Identities=28% Similarity=0.428 Sum_probs=201.6
Q ss_pred eeEeeeeccCCceEEEEEEEcCCCCEEEEEEeccch-------hhHHHHHHHHHHcCCCCccccceeeeeccCCCceEEE
Q 011138 139 YMAERVVGTGSFGVVFQAKCLETGDSVAIKKVLQDK-------RYKNRELQIMRLLNHPNVVSLKHCFFSTTEKDELYLN 211 (492)
Q Consensus 139 y~~~~~lG~G~fg~Vy~~~~~~~g~~vAiK~~~~~~-------~~~~~E~~il~~l~h~nIv~l~~~~~~~~~~~~~~~~ 211 (492)
|+..+.||+|+||.||+|.+..+++.||||.+.... ....+|+.+++.++|+||+.+++.+ .+..++|
T Consensus 2 f~~~~~ig~G~~g~v~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~i~~~~~~~-----~~~~~~~ 76 (285)
T cd05630 2 FRQYRVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGESMALNEKQILEKVNSRFVVSLAYAY-----ETKDALC 76 (285)
T ss_pred ceeeEEeecCCCeEEEEEEEcCCCceEEEEEEehhhccchHHHHHHHHHHHHHHhCCCCCeeeeeEEE-----ecCCEEE
Confidence 778889999999999999999999999999875421 2234699999999999999999887 3445689
Q ss_pred EEeeechhh-HHHHhhhhhhcCCCcCHHHHHHHHHHHHHHHHHHHhhCCcccCCCCCCceEEcCCCCcEEEeeecCcccc
Q 011138 212 LVLEYISET-VYRVSKHYTRMNQHVPILYVQLYTYQICRALNYLHHVVGVCHRDIKPQNLLVNPHTHQLKICDFGSAKML 290 (492)
Q Consensus 212 lV~E~~~~~-l~~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~yLH~~~givHrDlKp~NILl~~~~~~vkL~DFG~a~~~ 290 (492)
+||||+.++ +...+.. .....+++..+..++.|++.||.|||+ +||+||||||+||+++.++ .++|+|||++...
T Consensus 77 lv~e~~~g~~L~~~l~~--~~~~~l~~~~~~~~~~qi~~~l~~lH~-~~iiH~dikp~Nil~~~~~-~~~l~Dfg~~~~~ 152 (285)
T cd05630 77 LVLTLMNGGDLKFHIYH--MGEAGFEEGRAVFYAAEICCGLEDLHQ-ERIVYRDLKPENILLDDHG-HIRISDLGLAVHV 152 (285)
T ss_pred EEEEecCCCcHHHHHHH--hcccCCCHHHHHHHHHHHHHHHHHHHh-CCEEeCCCCHHHEEECCCC-CEEEeeccceeec
Confidence 999999865 4333322 223468899999999999999999997 9999999999999999887 7999999999765
Q ss_pred CCCCCCccceeccCccCchhhcCCCCCCcchhhHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCCHHHHhhcCCC
Q 011138 291 VPGEPNISYICSRYYRAPELIFGATEYTTAIDMWSIGCVLAELLLGQPLFPGESGVDQLVEIIKILGTPTREEIKCMNPN 370 (492)
Q Consensus 291 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DvwSlGvil~ell~G~~pf~~~~~~~~~~~i~~~~g~p~~~~~~~~~~~ 370 (492)
..........|+..|+|||++.+. .++.++|||||||++|+|++|+.||...................
T Consensus 153 ~~~~~~~~~~g~~~y~aPE~~~~~-~~~~~~DiwslG~~l~~l~~g~~Pf~~~~~~~~~~~~~~~~~~~----------- 220 (285)
T cd05630 153 PEGQTIKGRVGTVGYMAPEVVKNE-RYTFSPDWWALGCLLYEMIAGQSPFQQRKKKIKREEVERLVKEV----------- 220 (285)
T ss_pred CCCccccCCCCCccccChHHHcCC-CCCCccccHHHHHHHHHHHhCCCCCCCCCccchHHHHHhhhhhh-----------
Confidence 444444456789999999999654 48999999999999999999999998754321111111100000
Q ss_pred CcccCCCcccCCCcccccCCCCChhHhhhhccccccCCCCcCC-----HHHhhCCCCCCCCC
Q 011138 371 YTEFKFPQIKAHPWHKIFHKRMPPEALDLVSRLLQYSPSLRCT-----ALEACAHPFFDDLR 427 (492)
Q Consensus 371 ~~~~~~~~~~~~~~~~~~~~~~s~~~~~Li~~~L~~dP~~R~t-----~~e~l~Hp~f~~~~ 427 (492)
...+...+++++.+||.+||+.||.+||| +.|+++||||+.+.
T Consensus 221 --------------~~~~~~~~~~~~~~li~~~l~~~p~~R~s~~~~~~~~~~~h~~~~~~~ 268 (285)
T cd05630 221 --------------QEEYSEKFSPDARSLCKMLLCKDPKERLGCQGGGAREVKEHPLFKQIN 268 (285)
T ss_pred --------------hhhcCccCCHHHHHHHHHHhhcCHHHccCCCCCchHHHHcChhhhccC
Confidence 00122457889999999999999999999 89999999998753
No 132
>KOG0671 consensus LAMMER dual specificity kinases [Signal transduction mechanisms]
Probab=100.00 E-value=4.3e-45 Score=347.55 Aligned_cols=281 Identities=30% Similarity=0.550 Sum_probs=219.9
Q ss_pred ccceeEeeeeccCCceEEEEEEEcCCCCEEEEEEeccchhh---HHHHHHHHHHcCC--C----CccccceeeeeccCCC
Q 011138 136 TISYMAERVVGTGSFGVVFQAKCLETGDSVAIKKVLQDKRY---KNRELQIMRLLNH--P----NVVSLKHCFFSTTEKD 206 (492)
Q Consensus 136 ~~~y~~~~~lG~G~fg~Vy~~~~~~~g~~vAiK~~~~~~~~---~~~E~~il~~l~h--~----nIv~l~~~~~~~~~~~ 206 (492)
..+|.+.+.+|+|.||.|..+.+..++..||||+++.-.++ ..-|+++|.++.+ | -+|++.++| +-
T Consensus 88 ~~Ry~i~~~lGeGtFGkV~ec~D~~~~~~vAlKIik~V~kYreAa~iEi~vLqki~~~DP~g~~rcv~m~~wF-----dy 162 (415)
T KOG0671|consen 88 TNRYEIVDLLGEGTFGKVVECWDRETKEHVALKIIKNVDKYREAALIEIEVLQKINESDPNGKFRCVQMRDWF-----DY 162 (415)
T ss_pred ccceehhhhhcCCcccceEEEeecCCCceehHHHHHHHHHHhhHHHHHHHHHHHHHhcCCCCceEEEeeehhh-----hc
Confidence 45799999999999999999999999999999988654433 3359999999952 2 278888888 55
Q ss_pred ceEEEEEeeechhhHHHHhhhhhhcCCCcCHHHHHHHHHHHHHHHHHHHhhCCcccCCCCCCceEEcCC-----------
Q 011138 207 ELYLNLVLEYISETVYRVSKHYTRMNQHVPILYVQLYTYQICRALNYLHHVVGVCHRDIKPQNLLVNPH----------- 275 (492)
Q Consensus 207 ~~~~~lV~E~~~~~l~~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~yLH~~~givHrDlKp~NILl~~~----------- 275 (492)
....|||+|.++-++++++... ...+++...++.+++||+.+++|||+ .+++|-||||||||+.+.
T Consensus 163 rghiCivfellG~S~~dFlk~N--~y~~fpi~~ir~m~~QL~~sv~fLh~-~kl~HTDLKPENILfvss~~~~~~~~k~~ 239 (415)
T KOG0671|consen 163 RGHICIVFELLGLSTFDFLKEN--NYIPFPIDHIRHMGYQLLESVAFLHD-LKLTHTDLKPENILFVSSEYFKTYNPKKK 239 (415)
T ss_pred cCceEEEEeccChhHHHHhccC--CccccchHHHHHHHHHHHHHHHHHHh-cceeecCCChheEEEeccceEEEeccCCc
Confidence 5669999999998888876542 24678999999999999999999998 899999999999998421
Q ss_pred --------CCcEEEeeecCccccCCCCCCccceeccCccCchhhcCCCCCCcchhhHHHHHHHHHHHhCCCCCCCCChHH
Q 011138 276 --------THQLKICDFGSAKMLVPGEPNISYICSRYYRAPELIFGATEYTTAIDMWSIGCVLAELLLGQPLFPGESGVD 347 (492)
Q Consensus 276 --------~~~vkL~DFG~a~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DvwSlGvil~ell~G~~pf~~~~~~~ 347 (492)
...|||+|||.|+.. .+.....+.|..|+|||+++|-+ ++.++||||+||||+||.+|...|+..++.+
T Consensus 240 ~~~~r~~ks~~I~vIDFGsAtf~--~e~hs~iVsTRHYRAPEViLgLG-wS~pCDvWSiGCIL~ElytG~~LFqtHen~E 316 (415)
T KOG0671|consen 240 VCFIRPLKSTAIKVIDFGSATFD--HEHHSTIVSTRHYRAPEVILGLG-WSQPCDVWSIGCILVELYTGETLFQTHENLE 316 (415)
T ss_pred cceeccCCCcceEEEecCCccee--ccCcceeeeccccCCchheeccC-cCCccCceeeeeEEEEeeccceecccCCcHH
Confidence 115899999999864 34456788999999999998865 9999999999999999999999999999999
Q ss_pred HHHHHHHHhCCCCHHHHhhcC-CCC---cccCCCccc-----------CCCcccccC--CCCChhHhhhhccccccCCCC
Q 011138 348 QLVEIIKILGTPTREEIKCMN-PNY---TEFKFPQIK-----------AHPWHKIFH--KRMPPEALDLVSRLLQYSPSL 410 (492)
Q Consensus 348 ~~~~i~~~~g~p~~~~~~~~~-~~~---~~~~~~~~~-----------~~~~~~~~~--~~~s~~~~~Li~~~L~~dP~~ 410 (492)
+++.+..++|..+...+.... ..| ..+..|... ..++..... ...-.++.|||++||.+||.+
T Consensus 317 HLaMMerIlGp~P~~mi~r~~~~Kyf~~~rldw~e~~~~~~~k~v~~~ckpl~~~~~~~d~e~~~LfDLl~~mL~fDP~~ 396 (415)
T KOG0671|consen 317 HLAMMERILGPIPSRMIKKTRKEKYFRRGRLDWPEVSSKGKSKYVFEPCKPLKKYMLQDDLEHVQLFDLLRRMLEFDPAR 396 (415)
T ss_pred HHHHHHHhhCCCcHHHhhhhhhHhhhhcccccCccccccccchhhhcCCccHHHHhccCcHHHhHHHHHHHHHHccCccc
Confidence 999999999976666554331 000 011111110 001111100 111235889999999999999
Q ss_pred cCCHHHhhCCCCCCCCC
Q 011138 411 RCTALEACAHPFFDDLR 427 (492)
Q Consensus 411 R~t~~e~l~Hp~f~~~~ 427 (492)
|+|+.|+|.||||+.+.
T Consensus 397 RiTl~EAL~HpFF~~~~ 413 (415)
T KOG0671|consen 397 RITLREALSHPFFARLT 413 (415)
T ss_pred cccHHHHhcCHHhhcCC
Confidence 99999999999999764
No 133
>cd05603 STKc_SGK2 Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 2. Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3. SGK2 shows a more restricted distribution that SGK1 and is most abundantly expressed in epithelial tissues including kidney, liver, pancreas, and the choroid plexus of the brain. In vitro cellular assays show that SGK2 can stimulate the activity of ion channels, the glutamate transporter EEAT4, and the glutamate receptors, GluR6 and GLUR1.
Probab=100.00 E-value=8.2e-44 Score=355.18 Aligned_cols=246 Identities=28% Similarity=0.434 Sum_probs=194.9
Q ss_pred eeeccCCceEEEEEEEcCCCCEEEEEEeccch-------hhHHHH-HHHHHHcCCCCccccceeeeeccCCCceEEEEEe
Q 011138 143 RVVGTGSFGVVFQAKCLETGDSVAIKKVLQDK-------RYKNRE-LQIMRLLNHPNVVSLKHCFFSTTEKDELYLNLVL 214 (492)
Q Consensus 143 ~~lG~G~fg~Vy~~~~~~~g~~vAiK~~~~~~-------~~~~~E-~~il~~l~h~nIv~l~~~~~~~~~~~~~~~~lV~ 214 (492)
++||+|+||.||+|++..+|+.||+|++.+.. ....+| ..+++.++||||++++++| .+...+|+||
T Consensus 1 ~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~l~~~~h~~iv~~~~~~-----~~~~~~~lv~ 75 (321)
T cd05603 1 KVIGKGSFGKVLLAKRKSDGSFYAVKVLQKKTILKKKEQNHIMAERNVLLKNLKHPFLVGLHYSF-----QTAEKLYFVL 75 (321)
T ss_pred CeeeeCCCEEEEEEEECCCCCEEEEEEEEHHHHHHhhHHHHHHHHHHHHHHhCCCCCccceeeEE-----EcCCEEEEEE
Confidence 36999999999999999999999999985432 112233 3467889999999999888 4445689999
Q ss_pred eechhhHHHHhhhhhhcCCCcCHHHHHHHHHHHHHHHHHHHhhCCcccCCCCCCceEEcCCCCcEEEeeecCccccCC-C
Q 011138 215 EYISETVYRVSKHYTRMNQHVPILYVQLYTYQICRALNYLHHVVGVCHRDIKPQNLLVNPHTHQLKICDFGSAKMLVP-G 293 (492)
Q Consensus 215 E~~~~~l~~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~yLH~~~givHrDlKp~NILl~~~~~~vkL~DFG~a~~~~~-~ 293 (492)
||++++.+... ......+++..++.++.||+.||.|||+ +||+||||||+||||+.++ .+||+|||+++.... .
T Consensus 76 e~~~~~~L~~~---l~~~~~~~~~~~~~~~~qi~~~L~~lH~-~~ivH~Dlkp~NIll~~~~-~~kl~Dfg~~~~~~~~~ 150 (321)
T cd05603 76 DYVNGGELFFH---LQRERCFLEPRARFYAAEVASAIGYLHS-LNIIYRDLKPENILLDSQG-HVVLTDFGLCKEGVEPE 150 (321)
T ss_pred cCCCCCCHHHH---HHHcCCCCHHHHHHHHHHHHHHHHHHHH-CCeEeccCCHHHeEECCCC-CEEEccCCCCccCCCCC
Confidence 99987544221 1224568889999999999999999997 9999999999999999888 799999999875322 2
Q ss_pred CCCccceeccCccCchhhcCCCCCCcchhhHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCCHHHHhhcCCCCcc
Q 011138 294 EPNISYICSRYYRAPELIFGATEYTTAIDMWSIGCVLAELLLGQPLFPGESGVDQLVEIIKILGTPTREEIKCMNPNYTE 373 (492)
Q Consensus 294 ~~~~~~~gt~~y~aPE~~~~~~~~~~~~DvwSlGvil~ell~G~~pf~~~~~~~~~~~i~~~~g~p~~~~~~~~~~~~~~ 373 (492)
......+||+.|+|||++.+. .++.++|||||||++|||++|..||.+.+.......+.. ..
T Consensus 151 ~~~~~~~gt~~y~aPE~~~~~-~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~i~~-----------------~~ 212 (321)
T cd05603 151 ETTSTFCGTPEYLAPEVLRKE-PYDRTVDWWCLGAVLYEMLYGLPPFYSRDVSQMYDNILH-----------------KP 212 (321)
T ss_pred CccccccCCcccCCHHHhcCC-CCCCcCcccccchhhhhhhcCCCCCCCCCHHHHHHHHhc-----------------CC
Confidence 223456789999999998654 489999999999999999999999988776554444332 01
Q ss_pred cCCCcccCCCcccccCCCCChhHhhhhccccccCCCCcCCH----HHhhCCCCCCCCCC
Q 011138 374 FKFPQIKAHPWHKIFHKRMPPEALDLVSRLLQYSPSLRCTA----LEACAHPFFDDLRD 428 (492)
Q Consensus 374 ~~~~~~~~~~~~~~~~~~~s~~~~~Li~~~L~~dP~~R~t~----~e~l~Hp~f~~~~~ 428 (492)
.. ++...+.++.++|.+||+.||.+|+++ .++++||||..+..
T Consensus 213 ~~------------~~~~~~~~~~~li~~~l~~~p~~R~~~~~~~~~~~~~~~~~~~~~ 259 (321)
T cd05603 213 LQ------------LPGGKTVAACDLLVGLLHKDQRRRLGAKADFLEIKNHVFFSPINW 259 (321)
T ss_pred CC------------CCCCCCHHHHHHHHHHccCCHhhcCCCCCCHHHHhCCCCcCCCCH
Confidence 11 223468899999999999999999976 49999999987543
No 134
>cd05607 STKc_GRK7 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 7. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK7 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK7, also called iodopsin kinase, belongs to the visual gr
Probab=100.00 E-value=1.7e-43 Score=345.40 Aligned_cols=250 Identities=24% Similarity=0.366 Sum_probs=196.2
Q ss_pred eccCCceEEEEEEEcCCCCEEEEEEeccch-------hhHHHHHHHHHHcCCCCccccceeeeeccCCCceEEEEEeeec
Q 011138 145 VGTGSFGVVFQAKCLETGDSVAIKKVLQDK-------RYKNRELQIMRLLNHPNVVSLKHCFFSTTEKDELYLNLVLEYI 217 (492)
Q Consensus 145 lG~G~fg~Vy~~~~~~~g~~vAiK~~~~~~-------~~~~~E~~il~~l~h~nIv~l~~~~~~~~~~~~~~~~lV~E~~ 217 (492)
||+|+||.||++.+..+|+.||+|.+.... .....|+++++.++||||++++++| .+..++|+||||+
T Consensus 1 lg~G~~g~Vy~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~~~E~~il~~l~hp~i~~~~~~~-----~~~~~~~lv~e~~ 75 (277)
T cd05607 1 LGKGGFGEVCAVQVKNTGKMYACKKLDKKRLKKKSGEKMALLEKEILEKVNSPFIVNLAYAF-----ESKTHLCLVMSLM 75 (277)
T ss_pred CCCCCceEEEEEEEccCCcEEEEEEEcHHHhhcchhhHHHHHHHHHHHhcCCCcEEEEEEEE-----ecCCeEEEEEecC
Confidence 699999999999999999999999885321 2234699999999999999999888 4455789999999
Q ss_pred hhhHH-HHhhhhhhcCCCcCHHHHHHHHHHHHHHHHHHHhhCCcccCCCCCCceEEcCCCCcEEEeeecCccccCCCCCC
Q 011138 218 SETVY-RVSKHYTRMNQHVPILYVQLYTYQICRALNYLHHVVGVCHRDIKPQNLLVNPHTHQLKICDFGSAKMLVPGEPN 296 (492)
Q Consensus 218 ~~~l~-~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~yLH~~~givHrDlKp~NILl~~~~~~vkL~DFG~a~~~~~~~~~ 296 (492)
.++.+ ..+.. .....+++..+..++.||+.||.|||+ +||+||||||+|||++.++ .++|+|||++.........
T Consensus 76 ~g~~L~~~~~~--~~~~~~~~~~~~~~~~qi~~al~~lH~-~~ivH~dikp~Nili~~~~-~~~l~Dfg~~~~~~~~~~~ 151 (277)
T cd05607 76 NGGDLKYHIYN--VGERGLEMERVIHYSAQITCGILHLHS-MDIVYRDMKPENVLLDDQG-NCRLSDLGLAVELKDGKTI 151 (277)
T ss_pred CCCCHHHHHHh--ccccCCCHHHHHHHHHHHHHHHHHHHH-CCEEEccCChHhEEEcCCC-CEEEeeceeeeecCCCcee
Confidence 86544 33321 223457888889999999999999997 9999999999999999887 7999999999876544444
Q ss_pred ccceeccCccCchhhcCCCCCCcchhhHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCCHHHHhhcCCCCcccCC
Q 011138 297 ISYICSRYYRAPELIFGATEYTTAIDMWSIGCVLAELLLGQPLFPGESGVDQLVEIIKILGTPTREEIKCMNPNYTEFKF 376 (492)
Q Consensus 297 ~~~~gt~~y~aPE~~~~~~~~~~~~DvwSlGvil~ell~G~~pf~~~~~~~~~~~i~~~~g~p~~~~~~~~~~~~~~~~~ 376 (492)
....|++.|+|||++.+.. ++.++|||||||++|+|++|..||...........+....- . ....+
T Consensus 152 ~~~~~~~~y~aPE~~~~~~-~~~~~DvwslGv~l~el~~g~~p~~~~~~~~~~~~~~~~~~----------~---~~~~~ 217 (277)
T cd05607 152 TQRAGTNGYMAPEILKEEP-YSYPVDWFAMGCSIYEMVAGRTPFKDHKEKVAKEELKRRTL----------E---DEVKF 217 (277)
T ss_pred eccCCCCCccCHHHHccCC-CCCchhHHHHHHHHHHHHhCCCCCCCCcchhhHHHHHHHhh----------c---ccccc
Confidence 4567899999999997655 89999999999999999999999976543222222211100 0 00000
Q ss_pred CcccCCCcccccCCCCChhHhhhhccccccCCCCcCCH----HHhhCCCCCCCCCC
Q 011138 377 PQIKAHPWHKIFHKRMPPEALDLVSRLLQYSPSLRCTA----LEACAHPFFDDLRD 428 (492)
Q Consensus 377 ~~~~~~~~~~~~~~~~s~~~~~Li~~~L~~dP~~R~t~----~e~l~Hp~f~~~~~ 428 (492)
....+++++++||.+||+.||.+||++ ++++.||||+.+..
T Consensus 218 -----------~~~~~~~~~~~li~~~L~~~P~~R~~~~~~~~~~~~h~~f~~~~~ 262 (277)
T cd05607 218 -----------EHQNFTEESKDICRLFLAKKPEDRLGSREKNDDPRKHEFFKTINF 262 (277)
T ss_pred -----------ccccCCHHHHHHHHHHhccCHhhCCCCccchhhhhcChhhcCCCH
Confidence 112478999999999999999999999 67889999998643
No 135
>PTZ00283 serine/threonine protein kinase; Provisional
Probab=100.00 E-value=1.7e-43 Score=371.64 Aligned_cols=260 Identities=25% Similarity=0.365 Sum_probs=210.6
Q ss_pred cceeEeeeeccCCceEEEEEEEcCCCCEEEEEEeccc------hhhHHHHHHHHHHcCCCCccccceeeeeccC---CCc
Q 011138 137 ISYMAERVVGTGSFGVVFQAKCLETGDSVAIKKVLQD------KRYKNRELQIMRLLNHPNVVSLKHCFFSTTE---KDE 207 (492)
Q Consensus 137 ~~y~~~~~lG~G~fg~Vy~~~~~~~g~~vAiK~~~~~------~~~~~~E~~il~~l~h~nIv~l~~~~~~~~~---~~~ 207 (492)
.+|.+.+.||+|+||+||+|++..+|+.||||++... .....+|+.++..++|+||+++++.+..... ...
T Consensus 32 ~rY~i~~~LG~G~fG~Vy~a~~~~~g~~vAvK~i~~~~~~~~~~~~~~~Ei~~l~~~~h~~iv~~~~~~~~~~~~~~~~~ 111 (496)
T PTZ00283 32 KKYWISRVLGSGATGTVLCAKRVSDGEPFAVKVVDMEGMSEADKNRAQAEVCCLLNCDFFSIVKCHEDFAKKDPRNPENV 111 (496)
T ss_pred CCEEEEEEEecCCCEEEEEEEEcCCCCEEEEEEEecccCCHHHHHHHHHHHHHHhcCCCCcEEEeecceecccccCcccc
Confidence 3699999999999999999999999999999988542 2234579999999999999999887754332 222
Q ss_pred eEEEEEeeechh-hHHHHhhhhhhcCCCcCHHHHHHHHHHHHHHHHHHHhhCCcccCCCCCCceEEcCCCCcEEEeeecC
Q 011138 208 LYLNLVLEYISE-TVYRVSKHYTRMNQHVPILYVQLYTYQICRALNYLHHVVGVCHRDIKPQNLLVNPHTHQLKICDFGS 286 (492)
Q Consensus 208 ~~~~lV~E~~~~-~l~~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~yLH~~~givHrDlKp~NILl~~~~~~vkL~DFG~ 286 (492)
.++++||||+.+ +|.+.+.........+++..+..++.||+.||.|||+ +||+||||||+|||++.++ .+||+|||+
T Consensus 112 ~~i~lV~Ey~~~gsL~~~l~~~~~~~~~l~e~~~~~i~~qll~aL~~lH~-~~IiHrDLKP~NILl~~~~-~vkL~DFGl 189 (496)
T PTZ00283 112 LMIALVLDYANAGDLRQEIKSRAKTNRTFREHEAGLLFIQVLLAVHHVHS-KHMIHRDIKSANILLCSNG-LVKLGDFGF 189 (496)
T ss_pred eEEEEEEeCCCCCcHHHHHHHhhccCCCCCHHHHHHHHHHHHHHHHHHHh-CCEecCCCCHHHEEEeCCC-CEEEEeccc
Confidence 357899999985 5555554444445678999999999999999999997 9999999999999999887 799999999
Q ss_pred ccccCCC---CCCccceeccCccCchhhcCCCCCCcchhhHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCCHHH
Q 011138 287 AKMLVPG---EPNISYICSRYYRAPELIFGATEYTTAIDMWSIGCVLAELLLGQPLFPGESGVDQLVEIIKILGTPTREE 363 (492)
Q Consensus 287 a~~~~~~---~~~~~~~gt~~y~aPE~~~~~~~~~~~~DvwSlGvil~ell~G~~pf~~~~~~~~~~~i~~~~g~p~~~~ 363 (492)
++..... ......+||+.|+|||++.+. .++.++|||||||++|||++|+.||.+.+..+.+..+....
T Consensus 190 s~~~~~~~~~~~~~~~~Gt~~Y~aPE~~~~~-~~s~k~DVwSlGvilyeLltG~~Pf~~~~~~~~~~~~~~~~------- 261 (496)
T PTZ00283 190 SKMYAATVSDDVGRTFCGTPYYVAPEIWRRK-PYSKKADMFSLGVLLYELLTLKRPFDGENMEEVMHKTLAGR------- 261 (496)
T ss_pred CeeccccccccccccccCCcceeCHHHhCCC-CCCcHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHhcCC-------
Confidence 9765322 223356799999999999654 48999999999999999999999998877655554443210
Q ss_pred HhhcCCCCcccCCCcccCCCcccccCCCCChhHhhhhccccccCCCCcCCHHHhhCCCCCCCCC
Q 011138 364 IKCMNPNYTEFKFPQIKAHPWHKIFHKRMPPEALDLVSRLLQYSPSLRCTALEACAHPFFDDLR 427 (492)
Q Consensus 364 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~Li~~~L~~dP~~R~t~~e~l~Hp~f~~~~ 427 (492)
. ..++..+++++.+||.+||..||.+||++.++++|||++.+.
T Consensus 262 ------------~---------~~~~~~~~~~l~~li~~~L~~dP~~RPs~~ell~~p~~~~~~ 304 (496)
T PTZ00283 262 ------------Y---------DPLPPSISPEMQEIVTALLSSDPKRRPSSSKLLNMPICKLFI 304 (496)
T ss_pred ------------C---------CCCCCCCCHHHHHHHHHHcccChhhCcCHHHHHhCHHHHHhh
Confidence 0 012345789999999999999999999999999999987643
No 136
>PTZ00266 NIMA-related protein kinase; Provisional
Probab=100.00 E-value=3.2e-43 Score=382.03 Aligned_cols=263 Identities=28% Similarity=0.422 Sum_probs=210.6
Q ss_pred cccceeEeeeeccCCceEEEEEEEcCCCCEEEEEEeccc------hhhHHHHHHHHHHcCCCCccccceeeeeccCCCce
Q 011138 135 QTISYMAERVVGTGSFGVVFQAKCLETGDSVAIKKVLQD------KRYKNRELQIMRLLNHPNVVSLKHCFFSTTEKDEL 208 (492)
Q Consensus 135 ~~~~y~~~~~lG~G~fg~Vy~~~~~~~g~~vAiK~~~~~------~~~~~~E~~il~~l~h~nIv~l~~~~~~~~~~~~~ 208 (492)
...+|.+.+.||+|+||+||+|.+..++..||+|.+... ...+.+|+.+++.|+|||||+++++|... ...
T Consensus 11 ~l~~YeIl~kLG~GgFGtVYLAkdk~tg~~vAlKvIk~~~l~e~~~~~~~~EI~IL~~L~HPNIVrl~d~f~de---~~~ 87 (1021)
T PTZ00266 11 RLNEYEVIKKIGNGRFGEVFLVKHKRTQEFFCWKAISYRGLKEREKSQLVIEVNVMRELKHKNIVRYIDRFLNK---ANQ 87 (1021)
T ss_pred ccCCEEEEEEEecCCCeEEEEEEECCCCeEEEEEEEeccccCHHHHHHHHHHHHHHHHcCCCCcCeEEEEEEec---CCC
Confidence 345799999999999999999999999999999987532 23345799999999999999999988643 234
Q ss_pred EEEEEeeechh-hHHHHhhhhhhcCCCcCHHHHHHHHHHHHHHHHHHHhhCC-------cccCCCCCCceEEcCC-----
Q 011138 209 YLNLVLEYISE-TVYRVSKHYTRMNQHVPILYVQLYTYQICRALNYLHHVVG-------VCHRDIKPQNLLVNPH----- 275 (492)
Q Consensus 209 ~~~lV~E~~~~-~l~~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~yLH~~~g-------ivHrDlKp~NILl~~~----- 275 (492)
.+||||||+.+ +|...+.........+++..++.|+.||+.||.|||+ .+ ||||||||+||||+.+
T Consensus 88 ~lyIVMEY~~gGSL~~lL~k~~~~~g~L~E~~Il~Ia~QIL~ALaYLHs-~g~~~~~k~IVHRDLKPeNILL~s~~~~lg 166 (1021)
T PTZ00266 88 KLYILMEFCDAGDLSRNIQKCYKMFGKIEEHAIVDITRQLLHALAYCHN-LKDGPNGERVLHRDLKPQNIFLSTGIRHIG 166 (1021)
T ss_pred EEEEEEeCCCCCcHHHHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHh-cccccccCCceeccCcHHHeEeecCccccc
Confidence 68899999985 5655555444445679999999999999999999996 44 9999999999999642
Q ss_pred -----------CCcEEEeeecCccccCCCCCCccceeccCccCchhhcCC-CCCCcchhhHHHHHHHHHHHhCCCCCCCC
Q 011138 276 -----------THQLKICDFGSAKMLVPGEPNISYICSRYYRAPELIFGA-TEYTTAIDMWSIGCVLAELLLGQPLFPGE 343 (492)
Q Consensus 276 -----------~~~vkL~DFG~a~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~~~DvwSlGvil~ell~G~~pf~~~ 343 (492)
...+||+|||++............+||+.|+|||++.+. ..++.++||||||||||+|++|..||...
T Consensus 167 ~i~~~~~n~ng~~iVKLsDFGlAr~l~~~s~~~s~vGTp~YmAPEvL~ge~~~~s~KSDVWSLG~ILYELLTGk~PF~~~ 246 (1021)
T PTZ00266 167 KITAQANNLNGRPIAKIGDFGLSKNIGIESMAHSCVGTPYYWSPELLLHETKSYDDKSDMWALGCIIYELCSGKTPFHKA 246 (1021)
T ss_pred cccccccccCCCCceEEccCCccccccccccccccCCCccccCHHHHhccCCCCCchhHHHHHHHHHHHHHHCCCCCCcC
Confidence 124899999999876444444456899999999998643 35789999999999999999999999877
Q ss_pred ChHHHHHHHHHHhCCCCHHHHhhcCCCCcccCCCcccCCCcccccCCCCChhHhhhhccccccCCCCcCCHHHhhCCCCC
Q 011138 344 SGVDQLVEIIKILGTPTREEIKCMNPNYTEFKFPQIKAHPWHKIFHKRMPPEALDLVSRLLQYSPSLRCTALEACAHPFF 423 (492)
Q Consensus 344 ~~~~~~~~i~~~~g~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~Li~~~L~~dP~~R~t~~e~l~Hp~f 423 (492)
+....+...+... | .++ ....+.++.+||.+||..||.+||++.|+|.||||
T Consensus 247 ~~~~qli~~lk~~--p---------------~lp-----------i~~~S~eL~dLI~~~L~~dPeeRPSa~QlL~h~~i 298 (1021)
T PTZ00266 247 NNFSQLISELKRG--P---------------DLP-----------IKGKSKELNILIKNLLNLSAKERPSALQCLGYQII 298 (1021)
T ss_pred CcHHHHHHHHhcC--C---------------CCC-----------cCCCCHHHHHHHHHHhcCChhHCcCHHHHhccHHH
Confidence 6655554443310 0 000 02357899999999999999999999999999999
Q ss_pred CCCCCC
Q 011138 424 DDLRDP 429 (492)
Q Consensus 424 ~~~~~~ 429 (492)
+.+..+
T Consensus 299 k~i~~p 304 (1021)
T PTZ00266 299 KNVGPP 304 (1021)
T ss_pred hhcCCC
Confidence 876543
No 137
>cd05624 STKc_MRCK_beta Catalytic domain of the Protein Serine/Threonine Kinase, DMPK-related cell division control protein 42 binding kinase beta. Serine/Threonine Kinases (STKs), DMPK-like subfamily, DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK) beta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MRCK is activated via interaction with the small GTPase Cdc42. MRCK/Cdc42 signaling mediates myosin-dependent cell motility. MRCKbeta is expressed ubiquitously in many tissues.
Probab=100.00 E-value=1.5e-43 Score=354.90 Aligned_cols=256 Identities=25% Similarity=0.416 Sum_probs=204.0
Q ss_pred ceeEeeeeccCCceEEEEEEEcCCCCEEEEEEeccch-------hhHHHHHHHHHHcCCCCccccceeeeeccCCCceEE
Q 011138 138 SYMAERVVGTGSFGVVFQAKCLETGDSVAIKKVLQDK-------RYKNRELQIMRLLNHPNVVSLKHCFFSTTEKDELYL 210 (492)
Q Consensus 138 ~y~~~~~lG~G~fg~Vy~~~~~~~g~~vAiK~~~~~~-------~~~~~E~~il~~l~h~nIv~l~~~~~~~~~~~~~~~ 210 (492)
+|.+.+.||+|+||.||++++..+++.||+|++.+.. ....+|+.+++.++|+||+++++++ .+..++
T Consensus 2 ~y~i~~~lG~G~fg~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~l~~~~-----~~~~~~ 76 (331)
T cd05624 2 DFEIIKVIGRGAFGEVAVVKMKHTERIYAMKILNKWEMLKRAETACFREERNVLVNGDCQWITTLHYAF-----QDENYL 76 (331)
T ss_pred CceEEEEEeeCCCeEEEEEEECCCCCEEEEEEEeHHHHHhhHHHHHHHHHHHHHHhCCCCCEeeEEEEE-----EcCCEE
Confidence 5999999999999999999999999999999885421 2245688999999999999999988 455679
Q ss_pred EEEeeechhh-HHHHhhhhhhcCCCcCHHHHHHHHHHHHHHHHHHHhhCCcccCCCCCCceEEcCCCCcEEEeeecCccc
Q 011138 211 NLVLEYISET-VYRVSKHYTRMNQHVPILYVQLYTYQICRALNYLHHVVGVCHRDIKPQNLLVNPHTHQLKICDFGSAKM 289 (492)
Q Consensus 211 ~lV~E~~~~~-l~~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~yLH~~~givHrDlKp~NILl~~~~~~vkL~DFG~a~~ 289 (492)
|+||||+.|+ |...+. .....+++..++.++.||+.||+|||+ +||+||||||+|||++.++ .+||+|||++..
T Consensus 77 ~lv~Ey~~gg~L~~~l~---~~~~~l~~~~~~~~~~qi~~~L~~lH~-~~iiHrDlkp~Nill~~~~-~~kl~DfG~a~~ 151 (331)
T cd05624 77 YLVMDYYVGGDLLTLLS---KFEDRLPEDMARFYIAEMVLAIHSIHQ-LHYVHRDIKPDNVLLDMNG-HIRLADFGSCLK 151 (331)
T ss_pred EEEEeCCCCCcHHHHHH---HhcCCCCHHHHHHHHHHHHHHHHHHHH-CCeeeccCchHHEEEcCCC-CEEEEeccceee
Confidence 9999999865 444332 223568899999999999999999997 9999999999999999887 799999999976
Q ss_pred cCCCCCC--ccceeccCccCchhhcCC----CCCCcchhhHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCCHHH
Q 011138 290 LVPGEPN--ISYICSRYYRAPELIFGA----TEYTTAIDMWSIGCVLAELLLGQPLFPGESGVDQLVEIIKILGTPTREE 363 (492)
Q Consensus 290 ~~~~~~~--~~~~gt~~y~aPE~~~~~----~~~~~~~DvwSlGvil~ell~G~~pf~~~~~~~~~~~i~~~~g~p~~~~ 363 (492)
....... ....||+.|+|||++.+. ..++.++|||||||++|+|++|+.||.+.+..+.+..+....
T Consensus 152 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DiwSlGvil~ell~g~~Pf~~~~~~~~~~~i~~~~------- 224 (331)
T cd05624 152 MNQDGTVQSSVAVGTPDYISPEILQAMEDGMGKYGPECDWWSLGVCMYEMLYGETPFYAESLVETYGKIMNHE------- 224 (331)
T ss_pred ccCCCceeeccccCCcccCCHHHHhccccCCCCCCCcccEEeeehhhhhhhhCCCCccCCCHHHHHHHHHcCC-------
Confidence 5433221 235799999999998642 347889999999999999999999999877666555543310
Q ss_pred HhhcCCCCcccCCCcccCCCcccccCCCCChhHhhhhccccccCCCC--cCCHHHhhCCCCCCCCC
Q 011138 364 IKCMNPNYTEFKFPQIKAHPWHKIFHKRMPPEALDLVSRLLQYSPSL--RCTALEACAHPFFDDLR 427 (492)
Q Consensus 364 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~Li~~~L~~dP~~--R~t~~e~l~Hp~f~~~~ 427 (492)
..+.+|. ....+++++++||.+||..++.+ |++++++++||||+...
T Consensus 225 --------~~~~~p~---------~~~~~~~~~~~li~~ll~~~~~~~~~~~~~~~~~h~~f~~~~ 273 (331)
T cd05624 225 --------ERFQFPS---------HITDVSEEAKDLIQRLICSRERRLGQNGIEDFKKHAFFEGID 273 (331)
T ss_pred --------CcccCCC---------ccccCCHHHHHHHHHHccCchhhcCCCCHHHHhcCCCcCCCC
Confidence 0111221 11347899999999999976655 56899999999998754
No 138
>cd05617 STKc_aPKC_zeta Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C zeta. Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, zeta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. There are two aPKC isoforms, zeta and iota. PKC-zeta plays a critical role in activating the glucose transport response. It is activated by glucose, insulin, and exercise through diverse pathways
Probab=100.00 E-value=1.7e-43 Score=353.78 Aligned_cols=245 Identities=26% Similarity=0.494 Sum_probs=195.3
Q ss_pred eeeccCCceEEEEEEEcCCCCEEEEEEeccch-------hhHHHHHHHHHHc-CCCCccccceeeeeccCCCceEEEEEe
Q 011138 143 RVVGTGSFGVVFQAKCLETGDSVAIKKVLQDK-------RYKNRELQIMRLL-NHPNVVSLKHCFFSTTEKDELYLNLVL 214 (492)
Q Consensus 143 ~~lG~G~fg~Vy~~~~~~~g~~vAiK~~~~~~-------~~~~~E~~il~~l-~h~nIv~l~~~~~~~~~~~~~~~~lV~ 214 (492)
+.||+|+||.||+|.+..+++.||+|++.+.. ....+|+.++..+ +||||++++++| .+...+|+||
T Consensus 1 ~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~i~~~~~~~-----~~~~~~~lv~ 75 (327)
T cd05617 1 RVIGRGSYAKVLLVRLKKNDQIYAMKVVKKELVHDDEDIDWVQTEKHVFEQASSNPFLVGLHSCF-----QTTSRLFLVI 75 (327)
T ss_pred CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhhcCCCCEeeEEEEE-----EeCCEEEEEE
Confidence 36999999999999999999999999986532 2245788888887 699999999988 4445689999
Q ss_pred eechhhHH-HHhhhhhhcCCCcCHHHHHHHHHHHHHHHHHHHhhCCcccCCCCCCceEEcCCCCcEEEeeecCccccC-C
Q 011138 215 EYISETVY-RVSKHYTRMNQHVPILYVQLYTYQICRALNYLHHVVGVCHRDIKPQNLLVNPHTHQLKICDFGSAKMLV-P 292 (492)
Q Consensus 215 E~~~~~l~-~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~yLH~~~givHrDlKp~NILl~~~~~~vkL~DFG~a~~~~-~ 292 (492)
||++++.+ ..+. ....+++..++.++.||+.||.|||+ +||+||||||+|||++.++ .+||+|||+++... .
T Consensus 76 e~~~~~~L~~~~~----~~~~l~~~~~~~~~~qi~~al~~lH~-~~ivHrDlkp~Nili~~~~-~~kl~Dfg~~~~~~~~ 149 (327)
T cd05617 76 EYVNGGDLMFHMQ----RQRKLPEEHARFYAAEICIALNFLHE-RGIIYRDLKLDNVLLDADG-HIKLTDYGMCKEGLGP 149 (327)
T ss_pred eCCCCCcHHHHHH----HcCCCCHHHHHHHHHHHHHHHHHHHH-CCeeccCCCHHHEEEeCCC-CEEEeccccceeccCC
Confidence 99987543 3222 23568999999999999999999997 9999999999999999888 79999999987532 2
Q ss_pred CCCCccceeccCccCchhhcCCCCCCcchhhHHHHHHHHHHHhCCCCCCCCC------hHHHHHHHHHHhCCCCHHHHhh
Q 011138 293 GEPNISYICSRYYRAPELIFGATEYTTAIDMWSIGCVLAELLLGQPLFPGES------GVDQLVEIIKILGTPTREEIKC 366 (492)
Q Consensus 293 ~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DvwSlGvil~ell~G~~pf~~~~------~~~~~~~i~~~~g~p~~~~~~~ 366 (492)
.......+||+.|+|||++.+. .++.++|||||||++|+|++|..||.... ..+.+.+++..
T Consensus 150 ~~~~~~~~gt~~y~aPE~~~~~-~~~~~~DiwslGvil~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~----------- 217 (327)
T cd05617 150 GDTTSTFCGTPNYIAPEILRGE-EYGFSVDWWALGVLMFEMMAGRSPFDIITDNPDMNTEDYLFQVILE----------- 217 (327)
T ss_pred CCceecccCCcccCCHHHHCCC-CCCchheeehhHHHHHHHHhCCCCCCccCCCcccccHHHHHHHHHh-----------
Confidence 3334457899999999999654 58999999999999999999999996432 11222222210
Q ss_pred cCCCCcccCCCcccCCCcccccCCCCChhHhhhhccccccCCCCcCCH------HHhhCCCCCCCCC
Q 011138 367 MNPNYTEFKFPQIKAHPWHKIFHKRMPPEALDLVSRLLQYSPSLRCTA------LEACAHPFFDDLR 427 (492)
Q Consensus 367 ~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~Li~~~L~~dP~~R~t~------~e~l~Hp~f~~~~ 427 (492)
.... ++..++..+.+||.+||..||.+|+++ .++++||||+.+.
T Consensus 218 -----~~~~------------~p~~~~~~~~~li~~~L~~dP~~R~~~~~~~~~~~i~~h~~f~~~~ 267 (327)
T cd05617 218 -----KPIR------------IPRFLSVKASHVLKGFLNKDPKERLGCQPQTGFSDIKSHTFFRSID 267 (327)
T ss_pred -----CCCC------------CCCCCCHHHHHHHHHHhccCHHHcCCCCCCCCHHHHHcCCCCCCCC
Confidence 0111 223578999999999999999999984 6999999999865
No 139
>cd07836 STKc_Pho85 Catalytic domain of the Serine/Threonine Kinase, Fungal Cyclin-Dependent protein Kinase Pho85. Serine/Threonine Kinases (STKs), Pho85 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Pho85 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Pho85 is a multifunctional Cyclin-Dependent protein Kinase (CDK) in yeast. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. Pho85 is regulated by 10 different cyclins (Pcls) and plays a role in G1 progression, cell polarity, phosphate and glycogen metabolism, gene expression, and in signaling changes in the environment.
Probab=100.00 E-value=5e-43 Score=342.70 Aligned_cols=276 Identities=34% Similarity=0.634 Sum_probs=222.6
Q ss_pred ceeEeeeeccCCceEEEEEEEcCCCCEEEEEEeccc-----hhhHHHHHHHHHHcCCCCccccceeeeeccCCCceEEEE
Q 011138 138 SYMAERVVGTGSFGVVFQAKCLETGDSVAIKKVLQD-----KRYKNRELQIMRLLNHPNVVSLKHCFFSTTEKDELYLNL 212 (492)
Q Consensus 138 ~y~~~~~lG~G~fg~Vy~~~~~~~g~~vAiK~~~~~-----~~~~~~E~~il~~l~h~nIv~l~~~~~~~~~~~~~~~~l 212 (492)
+|.+.+.||.|++|.||+|++..+|..||||.+... .....+|+.+++.++|+||+++++++. +....++
T Consensus 1 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~-----~~~~~~l 75 (284)
T cd07836 1 NFKQLEKLGEGTYATVYKGRNRTTGEIVALKEIHLDAEEGTPSTAIREISLMKELKHENIVRLHDVIH-----TENKLML 75 (284)
T ss_pred CceEeeeeccCCceEEEEEEECCCCeEEEEEEecccccccchHHHHHHHHHHHhhcCCCEeeeeeeEe-----eCCcEEE
Confidence 488999999999999999999999999999988543 233457999999999999999999984 3345889
Q ss_pred EeeechhhHHHHhhhhhhcCCCcCHHHHHHHHHHHHHHHHHHHhhCCcccCCCCCCceEEcCCCCcEEEeeecCccccCC
Q 011138 213 VLEYISETVYRVSKHYTRMNQHVPILYVQLYTYQICRALNYLHHVVGVCHRDIKPQNLLVNPHTHQLKICDFGSAKMLVP 292 (492)
Q Consensus 213 V~E~~~~~l~~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~yLH~~~givHrDlKp~NILl~~~~~~vkL~DFG~a~~~~~ 292 (492)
||||+++++...+.... ....+++..+..++.||+.||.|||+ .||+||||||+||+++.++ .++|+|||++.....
T Consensus 76 v~e~~~~~l~~~~~~~~-~~~~~~~~~~~~~~~qi~~~l~~lH~-~~i~h~dl~p~ni~~~~~~-~~~l~d~g~~~~~~~ 152 (284)
T cd07836 76 VFEYMDKDLKKYMDTHG-VRGALDPNTVKSFTYQLLKGIAFCHE-NRVLHRDLKPQNLLINKRG-ELKLADFGLARAFGI 152 (284)
T ss_pred EEecCCccHHHHHHhcC-CCCCcCHHHHHHHHHHHHHHHHHHHH-CCeeeCCCCHHHEEECCCC-cEEEeecchhhhhcC
Confidence 99999988776654322 13468999999999999999999997 8999999999999999877 799999999875532
Q ss_pred CC-CCccceeccCccCchhhcCCCCCCcchhhHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCCHHHHhhcCCCC
Q 011138 293 GE-PNISYICSRYYRAPELIFGATEYTTAIDMWSIGCVLAELLLGQPLFPGESGVDQLVEIIKILGTPTREEIKCMNPNY 371 (492)
Q Consensus 293 ~~-~~~~~~gt~~y~aPE~~~~~~~~~~~~DvwSlGvil~ell~G~~pf~~~~~~~~~~~i~~~~g~p~~~~~~~~~~~~ 371 (492)
.. ......++..|++||++.+...++.++|||||||++|+|++|..||.+.+..+.+..+....+.|....+.... ..
T Consensus 153 ~~~~~~~~~~~~~y~~PE~~~~~~~~~~~~Dv~slG~~l~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~ 231 (284)
T cd07836 153 PVNTFSNEVVTLWYRAPDVLLGSRTYSTSIDIWSVGCIMAEMITGRPLFPGTNNEDQLLKIFRIMGTPTESTWPGIS-QL 231 (284)
T ss_pred CccccccccccccccChHHhcCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHHHhCCCChhhHHHHh-cC
Confidence 21 22345678899999998776668899999999999999999999999999888889998888888776665433 11
Q ss_pred cc--cCCCcccCCCcccccCCCCChhHhhhhccccccCCCCcCCHHHhhCCCCC
Q 011138 372 TE--FKFPQIKAHPWHKIFHKRMPPEALDLVSRLLQYSPSLRCTALEACAHPFF 423 (492)
Q Consensus 372 ~~--~~~~~~~~~~~~~~~~~~~s~~~~~Li~~~L~~dP~~R~t~~e~l~Hp~f 423 (492)
.. ..++........ .+.+.++.+++++|.+||+.||.+||++.++++||||
T Consensus 232 ~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~i~~~l~~~p~~R~~~~~~l~~~~f 284 (284)
T cd07836 232 PEYKPTFPRYPPQDLQ-QLFPHADPLGIDLLHRLLQLNPELRISAHDALQHPWF 284 (284)
T ss_pred chhcccccCCChHHHH-HHhhhcCcHHHHHHHHHhcCCcccCCCHHHHhcCCCC
Confidence 11 122222221121 1223568899999999999999999999999999998
No 140
>cd07870 STKc_PFTAIRE2 Catalytic domain of the Serine/Threonine Kinase, PFTAIRE-2 kinase. Serine/Threonine Kinases (STKs), PFTAIRE-2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PFTAIRE-2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PFTAIRE-2 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PFTAIRE-2 is also referred to as ALS2CR7 (amyotrophic lateral sclerosis 2 (juvenile) chromosome region candidate 7). It may be associated with amyotrophic lateral sclerosis 2 (ALS2), an autosomal recess
Probab=100.00 E-value=1.1e-42 Score=341.96 Aligned_cols=276 Identities=33% Similarity=0.580 Sum_probs=213.4
Q ss_pred cceeEeeeeccCCceEEEEEEEcCCCCEEEEEEeccch-----hhHHHHHHHHHHcCCCCccccceeeeeccCCCceEEE
Q 011138 137 ISYMAERVVGTGSFGVVFQAKCLETGDSVAIKKVLQDK-----RYKNRELQIMRLLNHPNVVSLKHCFFSTTEKDELYLN 211 (492)
Q Consensus 137 ~~y~~~~~lG~G~fg~Vy~~~~~~~g~~vAiK~~~~~~-----~~~~~E~~il~~l~h~nIv~l~~~~~~~~~~~~~~~~ 211 (492)
.+|.+.+.||+|+||.||+|.+..+|+.||||.+.... ....+|+.+++.++|+||+++++++ .+..+.|
T Consensus 5 ~~y~~~~~ig~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~e~~~l~~l~h~ni~~~~~~~-----~~~~~~~ 79 (291)
T cd07870 5 TSYLNLEKLGEGSYATVYKGISRINGQLVALKVISMKTEEGVPFTAIREASLLKGLKHANIVLLHDII-----HTKETLT 79 (291)
T ss_pred ceeEEEEEEEecCCEEEEEEEEcCCCcEEEEEEecccCcCCCcHHHHHHHHHHHhcCCCCEeEEEEEE-----ecCCeEE
Confidence 46999999999999999999999999999999885331 2345799999999999999999988 3444688
Q ss_pred EEeeechhhHHHHhhhhhhcCCCcCHHHHHHHHHHHHHHHHHHHhhCCcccCCCCCCceEEcCCCCcEEEeeecCccccC
Q 011138 212 LVLEYISETVYRVSKHYTRMNQHVPILYVQLYTYQICRALNYLHHVVGVCHRDIKPQNLLVNPHTHQLKICDFGSAKMLV 291 (492)
Q Consensus 212 lV~E~~~~~l~~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~yLH~~~givHrDlKp~NILl~~~~~~vkL~DFG~a~~~~ 291 (492)
+||||+.++++..+.. ....+++..++.++.||+.||.|||+ .||+||||||+|||++.++ .+||+|||+++...
T Consensus 80 lv~e~~~~~l~~~~~~---~~~~~~~~~~~~~~~qi~~~L~~lH~-~~i~H~dlkp~Nil~~~~~-~~~l~Dfg~~~~~~ 154 (291)
T cd07870 80 FVFEYMHTDLAQYMIQ---HPGGLHPYNVRLFMFQLLRGLAYIHG-QHILHRDLKPQNLLISYLG-ELKLADFGLARAKS 154 (291)
T ss_pred EEEecccCCHHHHHHh---CCCCCCHHHHHHHHHHHHHHHHHHHh-CCcccCCCChHHEEEcCCC-cEEEeccccccccC
Confidence 9999999877765432 23457788889999999999999997 8999999999999999887 89999999987542
Q ss_pred CC-CCCccceeccCccCchhhcCCCCCCcchhhHHHHHHHHHHHhCCCCCCCCCh-HHHHHHHHHHhCCCCHHHHhhcC-
Q 011138 292 PG-EPNISYICSRYYRAPELIFGATEYTTAIDMWSIGCVLAELLLGQPLFPGESG-VDQLVEIIKILGTPTREEIKCMN- 368 (492)
Q Consensus 292 ~~-~~~~~~~gt~~y~aPE~~~~~~~~~~~~DvwSlGvil~ell~G~~pf~~~~~-~~~~~~i~~~~g~p~~~~~~~~~- 368 (492)
.. .......+++.|+|||.+.+...++.++|||||||++|+|++|..||.+.+. .+.+.++...++.|....+....
T Consensus 155 ~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~~l~~l~~g~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 234 (291)
T cd07870 155 IPSQTYSSEVVTLWYRPPDVLLGATDYSSALDIWGAGCIFIEMLQGQPAFPGVSDVFEQLEKIWTVLGVPTEDTWPGVSK 234 (291)
T ss_pred CCCCCCCCccccccccCCceeecCCCCCcHHHHHHHHHHHHHHHhCCCCCCCchhHHHHHHHHHHHcCCCChhhhhhhhh
Confidence 21 1223456789999999987666688899999999999999999999987553 46667777777877766543221
Q ss_pred -CCCcccCCCcccCCCcccccCC--CCChhHhhhhccccccCCCCcCCHHHhhCCCCC
Q 011138 369 -PNYTEFKFPQIKAHPWHKIFHK--RMPPEALDLVSRLLQYSPSLRCTALEACAHPFF 423 (492)
Q Consensus 369 -~~~~~~~~~~~~~~~~~~~~~~--~~s~~~~~Li~~~L~~dP~~R~t~~e~l~Hp~f 423 (492)
+.+....++......... .+. ..+.++.+||.+||+.||.+|||+.|++.||||
T Consensus 235 ~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~ll~~~l~~dp~~R~t~~~~l~h~~~ 291 (291)
T cd07870 235 LPNYKPEWFLPCKPQQLRV-VWKRLSRPPKAEDLASQMLMMFPKDRISAQDALLHPYF 291 (291)
T ss_pred cccccchhccccCCcchhh-hccccCCChHHHHHHHHHhCcCcccCcCHHHHhcCCCC
Confidence 111111111111000000 011 136789999999999999999999999999998
No 141
>KOG0193 consensus Serine/threonine protein kinase RAF [Signal transduction mechanisms]
Probab=100.00 E-value=7e-44 Score=356.32 Aligned_cols=251 Identities=19% Similarity=0.264 Sum_probs=196.7
Q ss_pred CCccccceeEeeeeccCCceEEEEEEEcCCCCEEEEEEeccc------hhhHHHHHHHHHHcCCCCccccceeeeeccCC
Q 011138 132 QPKQTISYMAERVVGTGSFGVVFQAKCLETGDSVAIKKVLQD------KRYKNRELQIMRLLNHPNVVSLKHCFFSTTEK 205 (492)
Q Consensus 132 ~~~~~~~y~~~~~lG~G~fg~Vy~~~~~~~g~~vAiK~~~~~------~~~~~~E~~il~~l~h~nIv~l~~~~~~~~~~ 205 (492)
+........++..||+|.||+||+|++.++ ||||++..+ -+.+++|+.++++-+|.||+-+++++.
T Consensus 387 WeIp~~ev~l~~rIGsGsFGtV~Rg~whGd---VAVK~Lnv~~pt~~qlqaFKnEVa~lkkTRH~NIlLFMG~~~----- 458 (678)
T KOG0193|consen 387 WEIPPEEVLLGERIGSGSFGTVYRGRWHGD---VAVKLLNVDDPTPEQLQAFKNEVAVLKKTRHENILLFMGACM----- 458 (678)
T ss_pred cccCHHHhhccceeccccccceeecccccc---eEEEEEecCCCCHHHHHHHHHHHHHHhhcchhhheeeehhhc-----
Confidence 333444577889999999999999999655 999998543 245678999999999999999999983
Q ss_pred CceEEEEEeeechhhHHHHhhhhhhcCCCcCHHHHHHHHHHHHHHHHHHHhhCCcccCCCCCCceEEcCCCCcEEEeeec
Q 011138 206 DELYLNLVLEYISETVYRVSKHYTRMNQHVPILYVQLYTYQICRALNYLHHVVGVCHRDIKPQNLLVNPHTHQLKICDFG 285 (492)
Q Consensus 206 ~~~~~~lV~E~~~~~l~~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~yLH~~~givHrDlKp~NILl~~~~~~vkL~DFG 285 (492)
...+ .||+.+|+|..+....+ .....|.....+.|++||+.|+.|||. ++|||||||..|||+..++ +|||+|||
T Consensus 459 ~p~~-AIiTqwCeGsSLY~hlH--v~etkfdm~~~idIAqQiaqGM~YLHA-K~IIHrDLKSnNIFl~~~~-kVkIgDFG 533 (678)
T KOG0193|consen 459 NPPL-AIITQWCEGSSLYTHLH--VQETKFDMNTTIDIAQQIAQGMDYLHA-KNIIHRDLKSNNIFLHEDL-KVKIGDFG 533 (678)
T ss_pred CCce-eeeehhccCchhhhhcc--chhhhhhHHHHHHHHHHHHHhhhhhhh-hhhhhhhccccceEEccCC-cEEEeccc
Confidence 3333 79999999865443333 334678889999999999999999995 9999999999999999876 89999999
Q ss_pred CccccCC---CCCCccceeccCccCchhhcCC--CCCCcchhhHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCC
Q 011138 286 SAKMLVP---GEPNISYICSRYYRAPELIFGA--TEYTTAIDMWSIGCVLAELLLGQPLFPGESGVDQLVEIIKILGTPT 360 (492)
Q Consensus 286 ~a~~~~~---~~~~~~~~gt~~y~aPE~~~~~--~~~~~~~DvwSlGvil~ell~G~~pf~~~~~~~~~~~i~~~~g~p~ 360 (492)
++..... +.......|...|||||++... .+|+..+|||||||++|||++|..||...+....+..+-+.++.|.
T Consensus 534 Latvk~~w~g~~q~~qp~gsilwmAPEvIRmqd~nPfS~qSDVYaFGiV~YELltg~lPysi~~~dqIifmVGrG~l~pd 613 (678)
T KOG0193|consen 534 LATVKTRWSGEQQLEQPHGSLLWMAPEVIRMQDDNPFSFQSDVYAFGIVWYELLTGELPYSIQNRDQIIFMVGRGYLMPD 613 (678)
T ss_pred ceeeeeeeccccccCCCccchhhhcHHHHhhcccCCCCcccchhhhhHHHHHHHhCcCCcCCCChhheEEEecccccCcc
Confidence 9965421 2223345678899999999633 4589999999999999999999999995544444444433322222
Q ss_pred HHHHhhcCCCCcccCCCcccCCCcccccCCCCChhHhhhhccccccCCCCcCCHHHhhC
Q 011138 361 REEIKCMNPNYTEFKFPQIKAHPWHKIFHKRMPPEALDLVSRLLQYSPSLRCTALEACA 419 (492)
Q Consensus 361 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~Li~~~L~~dP~~R~t~~e~l~ 419 (492)
.-. ...+.+.++++|+..||.+++++||...+||.
T Consensus 614 ~s~------------------------~~s~~pk~mk~Ll~~C~~~~~~eRP~F~~il~ 648 (678)
T KOG0193|consen 614 LSK------------------------IRSNCPKAMKRLLSDCWKFDREERPLFPQLLS 648 (678)
T ss_pred chh------------------------hhccCHHHHHHHHHHHHhcCcccCccHHHHHH
Confidence 111 11356789999999999999999999999876
No 142
>cd05632 STKc_GRK5 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 5. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK5 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK5 is widely expressed in many tissues. It associates with
Probab=100.00 E-value=5.3e-43 Score=343.38 Aligned_cols=255 Identities=27% Similarity=0.401 Sum_probs=205.9
Q ss_pred eeEeeeeccCCceEEEEEEEcCCCCEEEEEEeccch-------hhHHHHHHHHHHcCCCCccccceeeeeccCCCceEEE
Q 011138 139 YMAERVVGTGSFGVVFQAKCLETGDSVAIKKVLQDK-------RYKNRELQIMRLLNHPNVVSLKHCFFSTTEKDELYLN 211 (492)
Q Consensus 139 y~~~~~lG~G~fg~Vy~~~~~~~g~~vAiK~~~~~~-------~~~~~E~~il~~l~h~nIv~l~~~~~~~~~~~~~~~~ 211 (492)
|+..+.||+|+||+||+|.+..+|+.||+|.+.... ....+|+++++.++|+||+.++++| .....+|
T Consensus 2 ~~~~~~lg~G~~g~vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~i~~~~~~~-----~~~~~~~ 76 (285)
T cd05632 2 FRQYRVLGKGGFGEVCACQVRATGKMYACKRLEKKRIKKRKGESMALNEKQILEKVNSQFVVNLAYAY-----ETKDALC 76 (285)
T ss_pred ceEEEEEecCCCeEEEEEEECCCCcEEEEEEeehhhhhhhhHHHHHHHHHHHHHHcCCcCceeEEEEE-----ecCCEEE
Confidence 778889999999999999999999999999885321 2345799999999999999998887 4445689
Q ss_pred EEeeechhhHHHHhhhhhhcCCCcCHHHHHHHHHHHHHHHHHHHhhCCcccCCCCCCceEEcCCCCcEEEeeecCccccC
Q 011138 212 LVLEYISETVYRVSKHYTRMNQHVPILYVQLYTYQICRALNYLHHVVGVCHRDIKPQNLLVNPHTHQLKICDFGSAKMLV 291 (492)
Q Consensus 212 lV~E~~~~~l~~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~yLH~~~givHrDlKp~NILl~~~~~~vkL~DFG~a~~~~ 291 (492)
+||||+.++.+..... ......+++..+..++.|++.||.|||+ +||+||||||+||+++.++ .+||+|||++....
T Consensus 77 lv~e~~~~~~L~~~~~-~~~~~~~~~~~~~~~~~ql~~~l~~lH~-~~iiH~dikp~Nili~~~~-~~kl~Dfg~~~~~~ 153 (285)
T cd05632 77 LVLTIMNGGDLKFHIY-NMGNPGFEEERALFYAAEILCGLEDLHR-ENTVYRDLKPENILLDDYG-HIRISDLGLAVKIP 153 (285)
T ss_pred EEEEeccCccHHHHHH-HhcCCCCCHHHHHHHHHHHHHHHHHHHh-CCeeecCCCHHHEEECCCC-CEEEecCCcceecC
Confidence 9999999764432222 1223468999999999999999999997 9999999999999999887 79999999997654
Q ss_pred CCCCCccceeccCccCchhhcCCCCCCcchhhHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCCHHHHhhcCCCC
Q 011138 292 PGEPNISYICSRYYRAPELIFGATEYTTAIDMWSIGCVLAELLLGQPLFPGESGVDQLVEIIKILGTPTREEIKCMNPNY 371 (492)
Q Consensus 292 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DvwSlGvil~ell~G~~pf~~~~~~~~~~~i~~~~g~p~~~~~~~~~~~~ 371 (492)
.........|+..|+|||++.+. .++.++|+|||||++|+|++|..||.+.........+........
T Consensus 154 ~~~~~~~~~g~~~~~aPE~~~~~-~~~~~~Di~slG~~l~~l~~g~~P~~~~~~~~~~~~~~~~~~~~~----------- 221 (285)
T cd05632 154 EGESIRGRVGTVGYMAPEVLNNQ-RYTLSPDYWGLGCLIYEMIEGQSPFRGRKEKVKREEVDRRVLETE----------- 221 (285)
T ss_pred CCCcccCCCCCcCccChHHhcCC-CCCcccchHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhhhccc-----------
Confidence 44444456889999999999654 489999999999999999999999988765544444333211100
Q ss_pred cccCCCcccCCCcccccCCCCChhHhhhhccccccCCCCcCC-----HHHhhCCCCCCCCC
Q 011138 372 TEFKFPQIKAHPWHKIFHKRMPPEALDLVSRLLQYSPSLRCT-----ALEACAHPFFDDLR 427 (492)
Q Consensus 372 ~~~~~~~~~~~~~~~~~~~~~s~~~~~Li~~~L~~dP~~R~t-----~~e~l~Hp~f~~~~ 427 (492)
..+...+++++.+|+.+||+.||++||+ +.++++|+||....
T Consensus 222 --------------~~~~~~~~~~~~~li~~~l~~~P~~R~~~~~~~~~~l~~~~~~~~~~ 268 (285)
T cd05632 222 --------------EVYSAKFSEEAKSICKMLLTKDPKQRLGCQEEGAGEVKRHPFFRNMN 268 (285)
T ss_pred --------------cccCccCCHHHHHHHHHHccCCHhHcCCCcccChHHHHcChhhhcCC
Confidence 0122457889999999999999999999 88999999999874
No 143
>PTZ00267 NIMA-related protein kinase; Provisional
Probab=100.00 E-value=2e-43 Score=370.50 Aligned_cols=253 Identities=27% Similarity=0.349 Sum_probs=206.1
Q ss_pred ceeEeeeeccCCceEEEEEEEcCC-CCEEEEEEeccc----hhhHHHHHHHHHHcCCCCccccceeeeeccCCCceEEEE
Q 011138 138 SYMAERVVGTGSFGVVFQAKCLET-GDSVAIKKVLQD----KRYKNRELQIMRLLNHPNVVSLKHCFFSTTEKDELYLNL 212 (492)
Q Consensus 138 ~y~~~~~lG~G~fg~Vy~~~~~~~-g~~vAiK~~~~~----~~~~~~E~~il~~l~h~nIv~l~~~~~~~~~~~~~~~~l 212 (492)
.|.+.+.||+|+||.||+|.+..+ ++.||+|.+..+ .....+|+.+++.++|||||+++++|. ....+||
T Consensus 68 ~y~~~~~lg~G~~g~vy~a~~~~~~~~~vv~K~~~~~~~~~~~~~~~E~~~l~~l~Hpniv~~~~~~~-----~~~~~~l 142 (478)
T PTZ00267 68 MYVLTTLVGRNPTTAAFVATRGSDPKEKVVAKFVMLNDERQAAYARSELHCLAACDHFGIVKHFDDFK-----SDDKLLL 142 (478)
T ss_pred eEEEEEEEEeCCCcEEEEEEEcCCCCeEEEEEEcccCCHHHHHHHHHHHHHHHhCCCCCEeEEEEEEE-----ECCEEEE
Confidence 499999999999999999998877 788999976432 234457999999999999999999983 3446899
Q ss_pred Eeeechhh-HHHHhhhhhhcCCCcCHHHHHHHHHHHHHHHHHHHhhCCcccCCCCCCceEEcCCCCcEEEeeecCccccC
Q 011138 213 VLEYISET-VYRVSKHYTRMNQHVPILYVQLYTYQICRALNYLHHVVGVCHRDIKPQNLLVNPHTHQLKICDFGSAKMLV 291 (492)
Q Consensus 213 V~E~~~~~-l~~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~yLH~~~givHrDlKp~NILl~~~~~~vkL~DFG~a~~~~ 291 (492)
||||+.++ |...+.........+++..+..++.||+.||.|||+ +||+||||||+|||++.++ .+||+|||+++...
T Consensus 143 v~E~~~gg~L~~~l~~~~~~~~~l~~~~~~~i~~qi~~aL~~lH~-~~ivHrDlkp~NIll~~~~-~~kL~DFgla~~~~ 220 (478)
T PTZ00267 143 IMEYGSGGDLNKQIKQRLKEHLPFQEYEVGLLFYQIVLALDEVHS-RKMMHRDLKSANIFLMPTG-IIKLGDFGFSKQYS 220 (478)
T ss_pred EEECCCCCCHHHHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHh-CCEEECCcCHHhEEECCCC-cEEEEeCcCceecC
Confidence 99999864 544444333344568899999999999999999997 9999999999999999887 79999999998654
Q ss_pred CCC---CCccceeccCccCchhhcCCCCCCcchhhHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCCHHHHhhcC
Q 011138 292 PGE---PNISYICSRYYRAPELIFGATEYTTAIDMWSIGCVLAELLLGQPLFPGESGVDQLVEIIKILGTPTREEIKCMN 368 (492)
Q Consensus 292 ~~~---~~~~~~gt~~y~aPE~~~~~~~~~~~~DvwSlGvil~ell~G~~pf~~~~~~~~~~~i~~~~g~p~~~~~~~~~ 368 (492)
... .....+||+.|+|||++.+. .++.++|||||||++|+|++|+.||.+.+..+.+..+... ..
T Consensus 221 ~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~~Dv~slG~~l~el~tg~~Pf~~~~~~~~~~~~~~~--~~--------- 288 (478)
T PTZ00267 221 DSVSLDVASSFCGTPYYLAPELWERK-RYSKKADMWSLGVILYELLTLHRPFKGPSQREIMQQVLYG--KY--------- 288 (478)
T ss_pred CccccccccccCCCccccCHhHhCCC-CCCcHHhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhC--CC---------
Confidence 322 13356799999999998654 5899999999999999999999999887766555554331 00
Q ss_pred CCCcccCCCcccCCCcccccCCCCChhHhhhhccccccCCCCcCCHHHhhCCCCCCCC
Q 011138 369 PNYTEFKFPQIKAHPWHKIFHKRMPPEALDLVSRLLQYSPSLRCTALEACAHPFFDDL 426 (492)
Q Consensus 369 ~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~Li~~~L~~dP~~R~t~~e~l~Hp~f~~~ 426 (492)
+ .++..+++++++||.+||..||++||++.+++.|||++.+
T Consensus 289 --------~---------~~~~~~s~~~~~li~~~L~~dP~~Rps~~~~l~~~~~~~~ 329 (478)
T PTZ00267 289 --------D---------PFPCPVSSGMKALLDPLLSKNPALRPTTQQLLHTEFLKYV 329 (478)
T ss_pred --------C---------CCCccCCHHHHHHHHHHhccChhhCcCHHHHHhCHHHHHH
Confidence 0 0123478899999999999999999999999999998643
No 144
>PF00069 Pkinase: Protein kinase domain Protein kinase; unclassified specificity. Serine/Threonine protein kinases, catalytic domain Tyrosine kinase, catalytic domain; InterPro: IPR017442 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases. Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. Eukaryotic protein kinases [, , , , ] are enzymes that belong to a very extensive family of proteins which share a conserved catalytic core common with both serine/threonine and tyrosine protein kinases. There are a number of conserved regions in the catalytic domain of protein kinases. In the N-terminal extremity of the catalytic domain there is a glycine-rich stretch of residues in the vicinity of a lysine residue, which has been shown to be involved in ATP binding. In the central part of the catalytic domain there is a conserved aspartic acid residue which is important for the catalytic activity of the enzyme []. This entry includes protein kinases from eukaryotes and viruses and may include some bacterial hits too.; GO: 0004672 protein kinase activity, 0005524 ATP binding, 0006468 protein phosphorylation; PDB: 3GC7_A 3ZYA_A 3MPT_A 3NEW_A 3MVM_A 1R3C_A 2FST_X 3E93_A 3HV5_B 3OCG_A ....
Probab=100.00 E-value=1.5e-43 Score=341.31 Aligned_cols=252 Identities=35% Similarity=0.562 Sum_probs=203.7
Q ss_pred eeEeeeeccCCceEEEEEEEcCCCCEEEEEEeccchhh------HHHHHHHHHHcCCCCccccceeeeeccCCCceEEEE
Q 011138 139 YMAERVVGTGSFGVVFQAKCLETGDSVAIKKVLQDKRY------KNRELQIMRLLNHPNVVSLKHCFFSTTEKDELYLNL 212 (492)
Q Consensus 139 y~~~~~lG~G~fg~Vy~~~~~~~g~~vAiK~~~~~~~~------~~~E~~il~~l~h~nIv~l~~~~~~~~~~~~~~~~l 212 (492)
|++++.||+|+||+||++.+..+++.||+|++...... ..+|+.+++.++||||+++++++.. ..++++
T Consensus 1 y~~~~~lg~G~~g~v~~~~~~~~~~~~~~K~~~~~~~~~~~~~~~~~e~~~~~~l~~~~i~~~~~~~~~-----~~~~~~ 75 (260)
T PF00069_consen 1 YRLVKKLGSGGFGTVYKAKNKKNGQKVAVKIIDKSEIEEEEREENIREIKILRRLRHPNIVQILDVFQD-----DNYLYI 75 (260)
T ss_dssp EEEEEEEEEESSEEEEEEEETTTTEEEEEEEEESTTHHHHHHHHHHHHHHHHHHHTBTTBCHEEEEEEE-----SSEEEE
T ss_pred CEEeEEEEeCCCEEEEEEEECCCCeEEEEEEeccccccccccchhhhhhhccccccccccccccccccc-----cccccc
Confidence 88999999999999999999999999999998654321 2348999999999999999999844 456889
Q ss_pred Eeeechh-hHHHHhhhhhhcCCCcCHHHHHHHHHHHHHHHHHHHhhCCcccCCCCCCceEEcCCCCcEEEeeecCcccc-
Q 011138 213 VLEYISE-TVYRVSKHYTRMNQHVPILYVQLYTYQICRALNYLHHVVGVCHRDIKPQNLLVNPHTHQLKICDFGSAKML- 290 (492)
Q Consensus 213 V~E~~~~-~l~~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~yLH~~~givHrDlKp~NILl~~~~~~vkL~DFG~a~~~- 290 (492)
||||+.+ .+...+. ....+++..+..++.||+.||.|||+ +||+|+||||+||+++.++ .++|+|||.+...
T Consensus 76 v~~~~~~~~L~~~l~----~~~~~~~~~~~~~~~qi~~~L~~Lh~-~~i~H~dikp~NIl~~~~~-~~~l~Dfg~~~~~~ 149 (260)
T PF00069_consen 76 VMEYCPGGSLQDYLQ----KNKPLSEEEILKIAYQILEALAYLHS-KGIVHRDIKPENILLDENG-EVKLIDFGSSVKLS 149 (260)
T ss_dssp EEEEETTEBHHHHHH----HHSSBBHHHHHHHHHHHHHHHHHHHH-TTEEESSBSGGGEEESTTS-EEEESSGTTTEEST
T ss_pred ccccccccccccccc----cccccccccccccccccccccccccc-ccccccccccccccccccc-cccccccccccccc
Confidence 9999998 5555544 34678999999999999999999997 8999999999999999777 8999999999753
Q ss_pred CCCCCCccceeccCccCchhhcCCCCCCcchhhHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCCHHHHhhcCCC
Q 011138 291 VPGEPNISYICSRYYRAPELIFGATEYTTAIDMWSIGCVLAELLLGQPLFPGESGVDQLVEIIKILGTPTREEIKCMNPN 370 (492)
Q Consensus 291 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DvwSlGvil~ell~G~~pf~~~~~~~~~~~i~~~~g~p~~~~~~~~~~~ 370 (492)
..........++..|+|||++.....++.++||||||+++|+|++|..||......+....+.+...........
T Consensus 150 ~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~----- 224 (260)
T PF00069_consen 150 ENNENFNPFVGTPEYMAPEVLQQGKKYTRKSDIWSLGIILYELLTGKLPFEESNSDDQLEIIEKILKRPLPSSSQ----- 224 (260)
T ss_dssp STTSEBSSSSSSGGGSCHHHHTTTSSBSTHHHHHHHHHHHHHHHHSSSSSTTSSHHHHHHHHHHHHHTHHHHHTT-----
T ss_pred ccccccccccccccccccccccccccccccccccccccccccccccccccccccchhhhhhhhhccccccccccc-----
Confidence 223334456789999999998634568999999999999999999999999875444444444332221111100
Q ss_pred CcccCCCcccCCCcccccCCCCChhHhhhhccccccCCCCcCCHHHhhCCCCC
Q 011138 371 YTEFKFPQIKAHPWHKIFHKRMPPEALDLVSRLLQYSPSLRCTALEACAHPFF 423 (492)
Q Consensus 371 ~~~~~~~~~~~~~~~~~~~~~~s~~~~~Li~~~L~~dP~~R~t~~e~l~Hp~f 423 (492)
.....++++.+||.+||+.||++||++.++++||||
T Consensus 225 -----------------~~~~~~~~l~~li~~~l~~~p~~R~~~~~l~~~~~~ 260 (260)
T PF00069_consen 225 -----------------QSREKSEELRDLIKKMLSKDPEQRPSAEELLKHPWF 260 (260)
T ss_dssp -----------------SHTTSHHHHHHHHHHHSSSSGGGSTTHHHHHTSGGG
T ss_pred -----------------ccchhHHHHHHHHHHHccCChhHCcCHHHHhcCCCC
Confidence 001123789999999999999999999999999998
No 145
>KOG0579 consensus Ste20-like serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=5.9e-45 Score=363.27 Aligned_cols=254 Identities=24% Similarity=0.383 Sum_probs=210.2
Q ss_pred ceeEeeeeccCCceEEEEEEEcCCCCEEEEEEecc-chhhH---HHHHHHHHHcCCCCccccceeeeeccCCCceEEEEE
Q 011138 138 SYMAERVVGTGSFGVVFQAKCLETGDSVAIKKVLQ-DKRYK---NRELQIMRLLNHPNVVSLKHCFFSTTEKDELYLNLV 213 (492)
Q Consensus 138 ~y~~~~~lG~G~fg~Vy~~~~~~~g~~vAiK~~~~-~~~~~---~~E~~il~~l~h~nIv~l~~~~~~~~~~~~~~~~lV 213 (492)
.|.|...||.|+||.||+|.++.++-..|.|+|.. ....+ .-|++||..++||+||+|++.||... .++|+
T Consensus 33 ~WeIiGELGDGAFGKVyKA~nket~~lAAaKvIetkseEELEDylVEIeILa~CdHP~ivkLl~ayy~en-----kLwil 107 (1187)
T KOG0579|consen 33 HWEIIGELGDGAFGKVYKAVNKETKLLAAAKVIETKSEEELEDYLVEIEILAECDHPVIVKLLSAYYFEN-----KLWIL 107 (1187)
T ss_pred HHHHHhhhcCccchhhhhhhcccchhhhhhhhhcccchhHHhhhhhhhhhhhcCCChHHHHHHHHHhccC-----ceEEE
Confidence 47888899999999999999999988888898743 22222 35999999999999999999885544 38999
Q ss_pred eeechhhHHHHhhhhhhcCCCcCHHHHHHHHHHHHHHHHHHHhhCCcccCCCCCCceEEcCCCCcEEEeeecCccccC-C
Q 011138 214 LEYISETVYRVSKHYTRMNQHVPILYVQLYTYQICRALNYLHHVVGVCHRDIKPQNLLVNPHTHQLKICDFGSAKMLV-P 292 (492)
Q Consensus 214 ~E~~~~~l~~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~yLH~~~givHrDlKp~NILl~~~~~~vkL~DFG~a~~~~-~ 292 (492)
.|||+||..+-+. ......+.+.+++.+++|+|.||.|||+ ++|||||||..|||++-+| .|+|+|||.+.... .
T Consensus 108 iEFC~GGAVDaim--lEL~r~LtE~QIqvvc~q~ldALn~LHs-~~iIHRDLKAGNiL~TldG-dirLADFGVSAKn~~t 183 (1187)
T KOG0579|consen 108 IEFCGGGAVDAIM--LELGRVLTEDQIQVVCYQVLDALNWLHS-QNIIHRDLKAGNILLTLDG-DIRLADFGVSAKNKST 183 (1187)
T ss_pred EeecCCchHhHHH--HHhccccchHHHHHHHHHHHHHHHHHhh-cchhhhhccccceEEEecC-cEeeecccccccchhH
Confidence 9999998665433 3456789999999999999999999997 9999999999999999998 79999999875432 2
Q ss_pred CCCCccceeccCccCchhhc----CCCCCCcchhhHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCCHHHHhhcC
Q 011138 293 GEPNISYICSRYYRAPELIF----GATEYTTAIDMWSIGCVLAELLLGQPLFPGESGVDQLVEIIKILGTPTREEIKCMN 368 (492)
Q Consensus 293 ~~~~~~~~gt~~y~aPE~~~----~~~~~~~~~DvwSlGvil~ell~G~~pf~~~~~~~~~~~i~~~~g~p~~~~~~~~~ 368 (492)
.....+++|||+|||||++. ...+|++++||||||++|.||.-+.+|-..-+....+.+|.+. .|+
T Consensus 184 ~qkRDsFIGTPYWMAPEVvmCET~KD~PYDykaDiWSlGITLIEMAqiEPPHhelnpMRVllKiaKS--ePP-------- 253 (1187)
T KOG0579|consen 184 RQKRDSFIGTPYWMAPEVVMCETFKDQPYDYKADIWSLGITLIEMAQIEPPHHELNPMRVLLKIAKS--EPP-------- 253 (1187)
T ss_pred HhhhccccCCcccccchheeeccccCCCchhhhhHHhhhhHHHHHhccCCCccccchHHHHHHHhhc--CCC--------
Confidence 23456799999999999974 3456999999999999999999999999888887777777652 111
Q ss_pred CCCcccCCCcccCCCcccccCCCCChhHhhhhccccccCCCCcCCHHHhhCCCCCCCC
Q 011138 369 PNYTEFKFPQIKAHPWHKIFHKRMPPEALDLVSRLLQYSPSLRCTALEACAHPFFDDL 426 (492)
Q Consensus 369 ~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~Li~~~L~~dP~~R~t~~e~l~Hp~f~~~ 426 (492)
. ...+.+-+..+.||+.+||.+||..||+++++|+||||+++
T Consensus 254 ---------T-------LlqPS~Ws~~F~DfLk~cL~Knp~~Rp~aaqll~Hpfv~~~ 295 (1187)
T KOG0579|consen 254 ---------T-------LLQPSHWSRSFSDFLKRCLVKNPRNRPPAAQLLKHPFVQNA 295 (1187)
T ss_pred ---------c-------ccCcchhhhHHHHHHHHHHhcCCccCCCHHHHhhCcccccC
Confidence 0 01123447789999999999999999999999999999954
No 146
>cd07834 STKc_MAPK Catalytic domain of the Serine/Threonine Kinase, Mitogen-Activated Protein Kinase. Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs serve as important mediators of cellular responses to extracellular signals. They control critical cellular functions including differentiation, proliferation, migration, and apoptosis. They are also implicated in the pathogenesis of many diseases including multiple types of cancer, stroke, diabetes, and chronic inflammation. Typical MAPK pathways involve a triple kinase core cascade comprising of the MAPK, which is phosphorylated and
Probab=100.00 E-value=6.3e-43 Score=349.91 Aligned_cols=289 Identities=39% Similarity=0.680 Sum_probs=232.3
Q ss_pred ceeEeeeeccCCceEEEEEEEcCCCCEEEEEEeccch------hhHHHHHHHHHHcCCCCccccceeeeeccCCCceEEE
Q 011138 138 SYMAERVVGTGSFGVVFQAKCLETGDSVAIKKVLQDK------RYKNRELQIMRLLNHPNVVSLKHCFFSTTEKDELYLN 211 (492)
Q Consensus 138 ~y~~~~~lG~G~fg~Vy~~~~~~~g~~vAiK~~~~~~------~~~~~E~~il~~l~h~nIv~l~~~~~~~~~~~~~~~~ 211 (492)
+|.+.+.||.|+||.||+|++..+|+.||||++.... ....+|+.+++.++|+||+++++++..........+|
T Consensus 1 ~y~i~~~ig~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~~~~~ 80 (330)
T cd07834 1 RYELLKPIGSGAYGVVCSAVDKRTGRKVAIKKISNVFDDLIDAKRILREIKLLRHLRHENIIGLLDILRPPSPEDFNDVY 80 (330)
T ss_pred CceeeeeecCCCCeEEEEEEeCCCCcEEEEEeeccccccchhhhhHHHHHHHHHhcCCcchhhhhhhhcccCcccccceE
Confidence 4889999999999999999999999999999885422 3455799999999999999999988554433334689
Q ss_pred EEeeechhhHHHHhhhhhhcCCCcCHHHHHHHHHHHHHHHHHHHhhCCcccCCCCCCceEEcCCCCcEEEeeecCccccC
Q 011138 212 LVLEYISETVYRVSKHYTRMNQHVPILYVQLYTYQICRALNYLHHVVGVCHRDIKPQNLLVNPHTHQLKICDFGSAKMLV 291 (492)
Q Consensus 212 lV~E~~~~~l~~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~yLH~~~givHrDlKp~NILl~~~~~~vkL~DFG~a~~~~ 291 (492)
+||||+++++...+.. ...+++..++.++.||+.||.|||+ +||+||||||+|||++.++ .++|+|||++....
T Consensus 81 lv~e~~~~~l~~~l~~----~~~l~~~~~~~i~~~l~~~l~~LH~-~gi~H~dlkp~nili~~~~-~~~L~dfg~~~~~~ 154 (330)
T cd07834 81 IVTELMETDLHKVIKS----PQPLTDDHIQYFLYQILRGLKYLHS-ANVIHRDLKPSNILVNSNC-DLKICDFGLARGVD 154 (330)
T ss_pred EEecchhhhHHHHHhC----CCCCCHHHHHHHHHHHHHHHHHHHh-CCeecCCCCHHHEEEcCCC-CEEEcccCceEeec
Confidence 9999999876665432 3478899999999999999999997 9999999999999999887 89999999998765
Q ss_pred CCC----CCccceeccCccCchhhcCCCCCCcchhhHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCCHHHHhhc
Q 011138 292 PGE----PNISYICSRYYRAPELIFGATEYTTAIDMWSIGCVLAELLLGQPLFPGESGVDQLVEIIKILGTPTREEIKCM 367 (492)
Q Consensus 292 ~~~----~~~~~~gt~~y~aPE~~~~~~~~~~~~DvwSlGvil~ell~G~~pf~~~~~~~~~~~i~~~~g~p~~~~~~~~ 367 (492)
... ......+++.|+|||++.+...++.++|+|||||++|+|++|.+||.+.+..+.+..+...++.|....+...
T Consensus 155 ~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~sDi~slG~il~~l~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~ 234 (330)
T cd07834 155 PDEDEKGFLTEYVVTRWYRAPELLLSSSRYTKAIDIWSVGCIFAELLTRKPLFPGRDYIDQLNLIVEVLGTPSEEDLKFI 234 (330)
T ss_pred ccccccccccccccccCcCCceeeecccCCCcchhHHHHHHHHHHHHcCCCCcCCCCHHHHHHHHHHhcCCCChhHhhhc
Confidence 442 2334578999999999977646899999999999999999999999999999999999999998887765422
Q ss_pred CCCC-ccc--CCCcccCCCcccccCCCCChhHhhhhccccccCCCCcCCHHHhhCCCCCCCCCCCCCCC
Q 011138 368 NPNY-TEF--KFPQIKAHPWHKIFHKRMPPEALDLVSRLLQYSPSLRCTALEACAHPFFDDLRDPNTCL 433 (492)
Q Consensus 368 ~~~~-~~~--~~~~~~~~~~~~~~~~~~s~~~~~Li~~~L~~dP~~R~t~~e~l~Hp~f~~~~~~~~~~ 433 (492)
.... ..+ .++.....++.. ....++.++.+||.+||+.||.+||++.++++||||++++++....
T Consensus 235 ~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~li~~~l~~~P~~Rpt~~~ll~~~~~~~~~~~~~~~ 302 (330)
T cd07834 235 TSEKARNYLKSLPKKPKKPLSK-LFPGASPEAIDLLEKMLVFDPKKRITADEALAHPYLAQLHDPEDEP 302 (330)
T ss_pred cccchhhHHhhcccCCcchhHH-hcccCCHHHHHHHHHHccCChhhCCCHHHHHhCccHHhhcccccCC
Confidence 1110 000 011111112222 2244789999999999999999999999999999999988765543
No 147
>cd07854 STKc_MAPK4_6 Catalytic domain of the Serine/Threonine Kinases, Mitogen-Activated Protein Kinases 4 and 6. Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase 4 (MAPK4) and MAPK6 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK4/6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. MAPK4 is also called ERK4 or p63MAPK, while MAPK6 is also called ERK3 or p97MAPK. MAPK4 and MAPK6 are atypical MAPKs that are not regulated by MAP2Ks. MAPK6 is expressed ubiquitously with highest amounts in brain and skeletal muscle. It may be involved in the control of cell differentiation by negatively regulating cell cycle progressi
Probab=100.00 E-value=1.1e-42 Score=350.18 Aligned_cols=286 Identities=31% Similarity=0.542 Sum_probs=216.8
Q ss_pred cceeEeeeeccCCceEEEEEEEcCCCCEEEEEEeccc----hhhHHHHHHHHHHcCCCCccccceeeeeccCC-------
Q 011138 137 ISYMAERVVGTGSFGVVFQAKCLETGDSVAIKKVLQD----KRYKNRELQIMRLLNHPNVVSLKHCFFSTTEK------- 205 (492)
Q Consensus 137 ~~y~~~~~lG~G~fg~Vy~~~~~~~g~~vAiK~~~~~----~~~~~~E~~il~~l~h~nIv~l~~~~~~~~~~------- 205 (492)
.+|.+.+.||.|+||.||+|.+..+|+.||+|++... .....+|+++++.++||||+++++++......
T Consensus 5 ~~y~~~~~Lg~g~~g~vy~~~~~~~~~~v~iK~i~~~~~~~~~~~~~Ei~~l~~l~h~~i~~~~~~~~~~~~~~~~~~~~ 84 (342)
T cd07854 5 SRYMDLRPLGCGSNGLVFSAVDSDCDKRVAVKKIVLTDPQSVKHALREIKIIRRLDHDNIVKVYEVLGPSGSDLTEDVGS 84 (342)
T ss_pred cceEEEEEecCCCCEEEEEEEECCCCcEEEEEEEecCCCchHHHHHHHHHHHHhcCCCcchhhHhhhccccccccccccc
Confidence 4699999999999999999999999999999988443 23355799999999999999999877443211
Q ss_pred --CceEEEEEeeechhhHHHHhhhhhhcCCCcCHHHHHHHHHHHHHHHHHHHhhCCcccCCCCCCceEEcCCCCcEEEee
Q 011138 206 --DELYLNLVLEYISETVYRVSKHYTRMNQHVPILYVQLYTYQICRALNYLHHVVGVCHRDIKPQNLLVNPHTHQLKICD 283 (492)
Q Consensus 206 --~~~~~~lV~E~~~~~l~~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~yLH~~~givHrDlKp~NILl~~~~~~vkL~D 283 (492)
.....|+||||+++++...+. ...+++..++.++.||+.||.|||+ .||+||||||+||+++.++..+||+|
T Consensus 85 ~~~~~~~~lv~e~~~~~L~~~~~-----~~~l~~~~~~~~~~qi~~aL~~LH~-~givH~dikp~Nili~~~~~~~kl~d 158 (342)
T cd07854 85 LTELNSVYIVQEYMETDLANVLE-----QGPLSEEHARLFMYQLLRGLKYIHS-ANVLHRDLKPANVFINTEDLVLKIGD 158 (342)
T ss_pred ccccceEEEEeecccccHHHHHH-----cCCCCHHHHHHHHHHHHHHHHHHHh-CCcccCCCCHHHEEEcCCCceEEECC
Confidence 123578999999986655432 2468899999999999999999997 99999999999999986665799999
Q ss_pred ecCccccCCCCC----CccceeccCccCchhhcCCCCCCcchhhHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCC
Q 011138 284 FGSAKMLVPGEP----NISYICSRYYRAPELIFGATEYTTAIDMWSIGCVLAELLLGQPLFPGESGVDQLVEIIKILGTP 359 (492)
Q Consensus 284 FG~a~~~~~~~~----~~~~~gt~~y~aPE~~~~~~~~~~~~DvwSlGvil~ell~G~~pf~~~~~~~~~~~i~~~~g~p 359 (492)
||++........ .....++..|+|||++.+...++.++|||||||++|+|++|+.||.+.+..+....+......+
T Consensus 159 fg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwSlGvil~el~~g~~pf~~~~~~~~~~~~~~~~~~~ 238 (342)
T cd07854 159 FGLARIVDPHYSHKGYLSEGLVTKWYRSPRLLLSPNNYTKAIDMWAAGCIFAEMLTGKPLFAGAHELEQMQLILESVPVV 238 (342)
T ss_pred cccceecCCccccccccccccccccccCHHHHhCccccCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhcCCC
Confidence 999976532211 1234678899999988665668899999999999999999999999888877777776655444
Q ss_pred CHHHHhhcCCCCccc-C-CCcccCCCcccccCCCCChhHhhhhccccccCCCCcCCHHHhhCCCCCCCCCCC
Q 011138 360 TREEIKCMNPNYTEF-K-FPQIKAHPWHKIFHKRMPPEALDLVSRLLQYSPSLRCTALEACAHPFFDDLRDP 429 (492)
Q Consensus 360 ~~~~~~~~~~~~~~~-~-~~~~~~~~~~~~~~~~~s~~~~~Li~~~L~~dP~~R~t~~e~l~Hp~f~~~~~~ 429 (492)
............... . .......+... +.+.++.++++||.+||+.||.+|||+.+++.||||+.+..|
T Consensus 239 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~li~~~L~~dP~~R~t~~ell~h~~~~~~~~~ 309 (342)
T cd07854 239 REEDRNELLNVIPSFVRNDGGEPRRPLRD-LLPGVNPEALDFLEQILTFNPMDRLTAEEALMHPYMSCYSCP 309 (342)
T ss_pred ChHHhhhhhhhhhhhhhhcccccCCCHHH-HccCCCHHHHHHHHHHhCCCchhccCHHHHhCCCccccccCC
Confidence 433222111000000 0 00000111111 223578999999999999999999999999999999976543
No 148
>cd07846 STKc_CDKL2_3 Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase Like 2 and 3. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 2 (CDKL2) and CDKL3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL2 and CDKL3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKL2, also called p56 KKIAMRE, is expressed in testis, kidney, lung, and brain. It functions mainly in mature neurons and plays an important role in learning and memory. Inactivation of CDKL3, also called NKI
Probab=100.00 E-value=7.7e-43 Score=341.68 Aligned_cols=276 Identities=36% Similarity=0.654 Sum_probs=218.2
Q ss_pred ceeEeeeeccCCceEEEEEEEcCCCCEEEEEEeccch------hhHHHHHHHHHHcCCCCccccceeeeeccCCCceEEE
Q 011138 138 SYMAERVVGTGSFGVVFQAKCLETGDSVAIKKVLQDK------RYKNRELQIMRLLNHPNVVSLKHCFFSTTEKDELYLN 211 (492)
Q Consensus 138 ~y~~~~~lG~G~fg~Vy~~~~~~~g~~vAiK~~~~~~------~~~~~E~~il~~l~h~nIv~l~~~~~~~~~~~~~~~~ 211 (492)
+|.+.+.||+|+||.||+|.+..+++.||+|.+.... ....+|+++++.++||||+++++++ .+..+.|
T Consensus 2 ~y~~~~~lg~g~~~~vy~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~-----~~~~~~~ 76 (286)
T cd07846 2 KYENLGLVGEGSYGMVMKCKHKETGQIVAIKKFLESEDDKMVKKIAMREIRMLKQLRHENLVNLIEVF-----RRKKRLY 76 (286)
T ss_pred ceeEeeeeccCCCeEEEEEEECCCCCEEEEEeHhhccCcchhhHHHHHHHHHHHhcCCcchhhHHHhc-----ccCCeEE
Confidence 5899999999999999999999999999999874322 2345799999999999999999998 4555789
Q ss_pred EEeeechhhHHHHhhhhhhcCCCcCHHHHHHHHHHHHHHHHHHHhhCCcccCCCCCCceEEcCCCCcEEEeeecCccccC
Q 011138 212 LVLEYISETVYRVSKHYTRMNQHVPILYVQLYTYQICRALNYLHHVVGVCHRDIKPQNLLVNPHTHQLKICDFGSAKMLV 291 (492)
Q Consensus 212 lV~E~~~~~l~~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~yLH~~~givHrDlKp~NILl~~~~~~vkL~DFG~a~~~~ 291 (492)
+||||+.++++..... ....+++..+..++.||+.||.|||+ .||+||||+|+||+++.++ .++|+|||++....
T Consensus 77 lv~e~~~~~~l~~~~~---~~~~~~~~~~~~~~~~i~~~l~~LH~-~~i~h~~l~p~ni~~~~~~-~~~l~dfg~~~~~~ 151 (286)
T cd07846 77 LVFEFVDHTVLDDLEK---YPNGLDESRVRKYLFQILRGIEFCHS-HNIIHRDIKPENILVSQSG-VVKLCDFGFARTLA 151 (286)
T ss_pred EEEecCCccHHHHHHh---ccCCCCHHHHHHHHHHHHHHHHHHHH-CCccccCCCHHHEEECCCC-cEEEEeeeeeeecc
Confidence 9999999876654322 23458899999999999999999997 8999999999999999887 79999999987654
Q ss_pred CCC-CCccceeccCccCchhhcCCCCCCcchhhHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCCHHHHhhc--C
Q 011138 292 PGE-PNISYICSRYYRAPELIFGATEYTTAIDMWSIGCVLAELLLGQPLFPGESGVDQLVEIIKILGTPTREEIKCM--N 368 (492)
Q Consensus 292 ~~~-~~~~~~gt~~y~aPE~~~~~~~~~~~~DvwSlGvil~ell~G~~pf~~~~~~~~~~~i~~~~g~p~~~~~~~~--~ 368 (492)
... ......++..|+|||++.+...++.++|||||||++|+|++|.+||...+..+....+....+.........+ .
T Consensus 152 ~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~~l~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 231 (286)
T cd07846 152 APGEVYTDYVATRWYRAPELLVGDTKYGRAVDIWAVGCLVTEMLTGEPLFPGDSDIDQLYHIIKCLGNLIPRHQEIFQKN 231 (286)
T ss_pred CCccccCcccceeeccCcHHhccccccCchHhHHHHHHHHHHHHcCCCCCCCCchHHHHHHHHHHhCCCchhhHHHhccc
Confidence 332 2234568899999999876666889999999999999999999999988888888888877766443322111 1
Q ss_pred CCCcccCCCcccCCCcccccCCCCChhHhhhhccccccCCCCcCCHHHhhCCCCC
Q 011138 369 PNYTEFKFPQIKAHPWHKIFHKRMPPEALDLVSRLLQYSPSLRCTALEACAHPFF 423 (492)
Q Consensus 369 ~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~Li~~~L~~dP~~R~t~~e~l~Hp~f 423 (492)
+......++......-.....+.++..+.+|+.+||..||.+||++.++++||||
T Consensus 232 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rp~~~~il~~~~~ 286 (286)
T cd07846 232 PLFAGMRLPEVKEIEPLEKRFPKLSGLVLDLAKQCLRIDPDDRPSSSQLLHHEFF 286 (286)
T ss_pred hHhhccccccccCcchHHHhCCCcCHHHHHHHHHHhcCCcccchhHHHHhcCCCC
Confidence 1111222222221111112234678999999999999999999999999999998
No 149
>cd07865 STKc_CDK9 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 9. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 9 (CDK9) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK9 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK9 together with a cyclin partner (cyclin T1, T2a, T2b, or K) is the main component of distinct positive transcription elongation factors (P-TEFb), which function as Ser2 C-terminal domain kinases of RNA polymerase II. P-TEFb participates in multipl
Probab=100.00 E-value=1.6e-42 Score=343.34 Aligned_cols=282 Identities=29% Similarity=0.486 Sum_probs=217.6
Q ss_pred cceeEeeeeccCCceEEEEEEEcCCCCEEEEEEeccch------hhHHHHHHHHHHcCCCCccccceeeeeccC---CCc
Q 011138 137 ISYMAERVVGTGSFGVVFQAKCLETGDSVAIKKVLQDK------RYKNRELQIMRLLNHPNVVSLKHCFFSTTE---KDE 207 (492)
Q Consensus 137 ~~y~~~~~lG~G~fg~Vy~~~~~~~g~~vAiK~~~~~~------~~~~~E~~il~~l~h~nIv~l~~~~~~~~~---~~~ 207 (492)
.+|.+.+.||+|+||.||+|.+..+++.||||.+.... ....+|+.+++.++||||+++++++..... ...
T Consensus 12 ~~y~~~~~lg~g~~~~v~~~~~~~~~~~~aik~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~ 91 (310)
T cd07865 12 SKYEKLAKIGQGTFGEVFKARHKKTKQIVALKKVLMENEKEGFPITALREIKILQLLKHENVVNLIEICRTKATPYNRYK 91 (310)
T ss_pred hheEEEEEeecCCCEEEEEEEECCCCcEEEEEEEeccCCcCCchhHHHHHHHHHHhCCCCCccceEEEEecccccccCCC
Confidence 46999999999999999999999999999999875321 123469999999999999999998755432 233
Q ss_pred eEEEEEeeechhhHHHHhhhhhhcCCCcCHHHHHHHHHHHHHHHHHHHhhCCcccCCCCCCceEEcCCCCcEEEeeecCc
Q 011138 208 LYLNLVLEYISETVYRVSKHYTRMNQHVPILYVQLYTYQICRALNYLHHVVGVCHRDIKPQNLLVNPHTHQLKICDFGSA 287 (492)
Q Consensus 208 ~~~~lV~E~~~~~l~~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~yLH~~~givHrDlKp~NILl~~~~~~vkL~DFG~a 287 (492)
...++||||+++++...+.. ....+++..++.++.||+.||.|||+ +||+|+||||+||+++.++ .+||+|||++
T Consensus 92 ~~~~lv~e~~~~~l~~~l~~---~~~~~~~~~~~~i~~qi~~al~~lH~-~~i~H~dl~p~nil~~~~~-~~kl~dfg~~ 166 (310)
T cd07865 92 GSFYLVFEFCEHDLAGLLSN---KNVKFTLSEIKKVMKMLLNGLYYIHR-NKILHRDMKAANILITKDG-ILKLADFGLA 166 (310)
T ss_pred ceEEEEEcCCCcCHHHHHHh---cccCCCHHHHHHHHHHHHHHHHHHHH-CCeeccCCCHHHEEECCCC-cEEECcCCCc
Confidence 45789999999877665432 23468999999999999999999997 8999999999999999887 8999999999
Q ss_pred cccCCCCC-----CccceeccCccCchhhcCCCCCCcchhhHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCCHH
Q 011138 288 KMLVPGEP-----NISYICSRYYRAPELIFGATEYTTAIDMWSIGCVLAELLLGQPLFPGESGVDQLVEIIKILGTPTRE 362 (492)
Q Consensus 288 ~~~~~~~~-----~~~~~gt~~y~aPE~~~~~~~~~~~~DvwSlGvil~ell~G~~pf~~~~~~~~~~~i~~~~g~p~~~ 362 (492)
........ .....++..|+|||.+.+...++.++|||||||++|+|++|++||.+.+....+..+....|..+.+
T Consensus 167 ~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~~l~el~t~~~~~~~~~~~~~~~~~~~~~~~~~~~ 246 (310)
T cd07865 167 RAFSLSKNSKPNRYTNRVVTLWYRPPELLLGERDYGPPIDMWGAGCIMAEMWTRSPIMQGNTEQHQLTLISQLCGSITPE 246 (310)
T ss_pred ccccCCcccCCCCccCcccCccccCcHHhcCCcccCchhhhHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCChh
Confidence 76532221 1234678899999998776667899999999999999999999999988877777777777776655
Q ss_pred HHhhcC--CCCcccCCCcccCCCcccc-cCCCCChhHhhhhccccccCCCCcCCHHHhhCCCCC
Q 011138 363 EIKCMN--PNYTEFKFPQIKAHPWHKI-FHKRMPPEALDLVSRLLQYSPSLRCTALEACAHPFF 423 (492)
Q Consensus 363 ~~~~~~--~~~~~~~~~~~~~~~~~~~-~~~~~s~~~~~Li~~~L~~dP~~R~t~~e~l~Hp~f 423 (492)
.++... ..+....++.......... .+...++.+++||.+||..||.+|||++++++||||
T Consensus 247 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~dli~~~l~~~P~~R~t~~e~l~h~~f 310 (310)
T cd07865 247 VWPGVDKLELFKKMELPQGQKRKVKERLKPYVKDPHALDLIDKLLVLDPAKRIDADTALNHDFF 310 (310)
T ss_pred hcccccchhhhhhccCCCccchhhHHhcccccCCHHHHHHHHHHhcCChhhccCHHHHhcCCCC
Confidence 443221 0111112222111111100 111246788999999999999999999999999998
No 150
>cd07866 STKc_BUR1 Catalytic domain of the Serine/Threonine Kinase, Fungal Cyclin-Dependent protein Kinase Bypass UAS Requirement 1 and similar proteins. Serine/Threonine Kinases (STKs), Bypass UAS Requirement 1 (BUR1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The BUR1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. BUR1, also called SGV1, is a yeast Cyclin-Dependent protein Kinase (CDK) that is functionally equivalent to mammalian CDK9. It associates with the cyclin BUR2. BUR genes were orginally identified in a genetic
Probab=100.00 E-value=1.7e-42 Score=343.24 Aligned_cols=281 Identities=35% Similarity=0.605 Sum_probs=221.4
Q ss_pred ccceeEeeeeccCCceEEEEEEEcCCCCEEEEEEeccch------hhHHHHHHHHHHcCCCCccccceeeeeccC---CC
Q 011138 136 TISYMAERVVGTGSFGVVFQAKCLETGDSVAIKKVLQDK------RYKNRELQIMRLLNHPNVVSLKHCFFSTTE---KD 206 (492)
Q Consensus 136 ~~~y~~~~~lG~G~fg~Vy~~~~~~~g~~vAiK~~~~~~------~~~~~E~~il~~l~h~nIv~l~~~~~~~~~---~~ 206 (492)
..+|.+.+.||.|+||.||+|.+..+++.||||++.... ....+|+++++.++||||+++++++..... ..
T Consensus 7 ~~~y~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~~~ 86 (311)
T cd07866 7 LRDYEILGKLGEGTFGEVYKARQIKTGRVVALKKILMHNEKDGFPITALREIKILKKLKHPNVVPLIDMAVERPDKSKRK 86 (311)
T ss_pred cccEEEEEEeccCCCEEEEEEEECCCCcEEEEEEEEeccCCCCcchhHHHHHHHHHhcCCCCccchhhheeccccccccc
Confidence 467999999999999999999999999999999874321 234579999999999999999998755432 23
Q ss_pred ceEEEEEeeechhhHHHHhhhhhhcCCCcCHHHHHHHHHHHHHHHHHHHhhCCcccCCCCCCceEEcCCCCcEEEeeecC
Q 011138 207 ELYLNLVLEYISETVYRVSKHYTRMNQHVPILYVQLYTYQICRALNYLHHVVGVCHRDIKPQNLLVNPHTHQLKICDFGS 286 (492)
Q Consensus 207 ~~~~~lV~E~~~~~l~~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~yLH~~~givHrDlKp~NILl~~~~~~vkL~DFG~ 286 (492)
...+++||||+.+++...+.. ....+++..++.++.||+.||.|||+ +||+||||||+|||++.++ .+||+|||+
T Consensus 87 ~~~~~lv~~~~~~~l~~~~~~---~~~~~~~~~~~~i~~~l~~al~~lH~-~~i~H~dl~p~nil~~~~~-~~~l~dfg~ 161 (311)
T cd07866 87 RGSVYMVTPYMDHDLSGLLEN---PSVKLTESQIKCYMLQLLEGINYLHE-NHILHRDIKAANILIDNQG-ILKIADFGL 161 (311)
T ss_pred CceEEEEEecCCcCHHHHHhc---cccCCCHHHHHHHHHHHHHHHHHHHh-CCeecCCCCHHHEEECCCC-CEEECcCcc
Confidence 446889999999876654432 24568999999999999999999997 9999999999999999888 799999999
Q ss_pred ccccCCCCC------------CccceeccCccCchhhcCCCCCCcchhhHHHHHHHHHHHhCCCCCCCCChHHHHHHHHH
Q 011138 287 AKMLVPGEP------------NISYICSRYYRAPELIFGATEYTTAIDMWSIGCVLAELLLGQPLFPGESGVDQLVEIIK 354 (492)
Q Consensus 287 a~~~~~~~~------------~~~~~gt~~y~aPE~~~~~~~~~~~~DvwSlGvil~ell~G~~pf~~~~~~~~~~~i~~ 354 (492)
+........ .....+++.|+|||.+.+...++.++|||||||++|+|++|++||.+.+.......+..
T Consensus 162 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~il~el~~g~~~~~~~~~~~~~~~~~~ 241 (311)
T cd07866 162 ARPYDGPPPNPKGGGGGGTRKYTNLVVTRWYRPPELLLGERRYTTAVDIWGIGCVFAEMFTRRPILQGKSDIDQLHLIFK 241 (311)
T ss_pred chhccCCCcccccCCcccccccccceeccCcCChHHhhCCCccCchhHhHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHH
Confidence 976532211 12346788999999987666689999999999999999999999999999888888888
Q ss_pred HhCCCCHHHHhhcC--CCCcc-cCCCcccCCCcccccCCCCChhHhhhhccccccCCCCcCCHHHhhCCCCC
Q 011138 355 ILGTPTREEIKCMN--PNYTE-FKFPQIKAHPWHKIFHKRMPPEALDLVSRLLQYSPSLRCTALEACAHPFF 423 (492)
Q Consensus 355 ~~g~p~~~~~~~~~--~~~~~-~~~~~~~~~~~~~~~~~~~s~~~~~Li~~~L~~dP~~R~t~~e~l~Hp~f 423 (492)
..+.+....+.... +.... ....... ..+.. ....+++++.+||.+||+.||.+|||+.+++.||||
T Consensus 242 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~-~~~~~~~~~~~~i~~~l~~~p~~R~t~~ell~~~~f 311 (311)
T cd07866 242 LCGTPTEETWPGWRSLPGCEGVHSFTNYP-RTLEE-RFGKLGPEGLDLLSKLLSLDPYKRLTASDALEHPYF 311 (311)
T ss_pred HhCCCChhhchhhhhcccccccccCCCCC-ccHHH-HcccCChhHHHHHHHHcccCcccCcCHHHHhcCCCC
Confidence 88887766554322 11110 0001100 01111 113456889999999999999999999999999998
No 151
>cd06650 PKc_MEK1 Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase 1. Protein kinases (PKs), MAP/ERK kinase (MEK) 1 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK1 is a dual-specificity PK that phosphorylates and activates the downst
Probab=100.00 E-value=4.3e-43 Score=351.75 Aligned_cols=278 Identities=26% Similarity=0.427 Sum_probs=202.8
Q ss_pred cceeEeeeeccCCceEEEEEEEcCCCCEEEEEEeccc-----hhhHHHHHHHHHHcCCCCccccceeeeeccCCCceEEE
Q 011138 137 ISYMAERVVGTGSFGVVFQAKCLETGDSVAIKKVLQD-----KRYKNRELQIMRLLNHPNVVSLKHCFFSTTEKDELYLN 211 (492)
Q Consensus 137 ~~y~~~~~lG~G~fg~Vy~~~~~~~g~~vAiK~~~~~-----~~~~~~E~~il~~l~h~nIv~l~~~~~~~~~~~~~~~~ 211 (492)
.+|.+.+.||+|+||.||+|.+..+|..+|+|.+... .....+|+++++.++||||++++++|.. ..++|
T Consensus 5 ~~y~~~~~lg~g~~g~V~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~-----~~~~~ 79 (333)
T cd06650 5 DDFEKISELGAGNGGVVFKVSHKPSGLIMARKLIHLEIKPAIRNQIIRELQVLHECNSPYIVGFYGAFYS-----DGEIS 79 (333)
T ss_pred hhhheeccccCCCCEEEEEEEECCCCcEEEEEEeecccCHHHHHHHHHHHHHHHHCCCCcccceeEEEEE-----CCEEE
Confidence 4699999999999999999999999999999987543 1335689999999999999999999843 34689
Q ss_pred EEeeechhh-HHHHhhhhhhcCCCcCHHHHHHHHHHHHHHHHHHHhhCCcccCCCCCCceEEcCCCCcEEEeeecCcccc
Q 011138 212 LVLEYISET-VYRVSKHYTRMNQHVPILYVQLYTYQICRALNYLHHVVGVCHRDIKPQNLLVNPHTHQLKICDFGSAKML 290 (492)
Q Consensus 212 lV~E~~~~~-l~~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~yLH~~~givHrDlKp~NILl~~~~~~vkL~DFG~a~~~ 290 (492)
+||||+.++ |.+.+.. ...+++..+..++.||+.||.|||+..+|+||||||+|||++.++ .+||+|||++...
T Consensus 80 lv~e~~~~~~L~~~l~~----~~~~~~~~~~~~~~~l~~~l~~lH~~~~ivH~dlkp~Nili~~~~-~~kL~Dfg~~~~~ 154 (333)
T cd06650 80 ICMEHMDGGSLDQVLKK----AGRIPEQILGKVSIAVIKGLTYLREKHKIMHRDVKPSNILVNSRG-EIKLCDFGVSGQL 154 (333)
T ss_pred EEEecCCCCcHHHHHHH----cCCCCHHHHHHHHHHHHHHHHHHHhcCCEEecCCChhhEEEcCCC-CEEEeeCCcchhh
Confidence 999999864 4444332 346888899999999999999999624799999999999999887 7999999998755
Q ss_pred CCCCCCccceeccCccCchhhcCCCCCCcchhhHHHHHHHHHHHhCCCCCCCCChHHHHHHHHH--HhCCCCHHHHhh-c
Q 011138 291 VPGEPNISYICSRYYRAPELIFGATEYTTAIDMWSIGCVLAELLLGQPLFPGESGVDQLVEIIK--ILGTPTREEIKC-M 367 (492)
Q Consensus 291 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DvwSlGvil~ell~G~~pf~~~~~~~~~~~i~~--~~g~p~~~~~~~-~ 367 (492)
... ......||..|+|||++.+. .++.++|||||||++|+|++|+.||......+.. .+.. ..+.+....... .
T Consensus 155 ~~~-~~~~~~~~~~y~aPE~~~~~-~~~~~~DvwslG~il~~l~~g~~p~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~ 231 (333)
T cd06650 155 IDS-MANSFVGTRSYMSPERLQGT-HYSVQSDIWSMGLSLVEMAIGRYPIPPPDAKELE-LMFGCPVEGDPAESETSPRP 231 (333)
T ss_pred hhh-ccccCCCCccccCHHHhcCC-CCCcHHHHHHHHHHHHHHHHCCCCCCCcchhHHH-HHhcCcccCCccccccCccc
Confidence 322 23345789999999999654 4899999999999999999999999876543222 1111 001111000000 0
Q ss_pred CC------CCcccCCCc---------ccCCCcccccCCCCChhHhhhhccccccCCCCcCCHHHhhCCCCCCCCC
Q 011138 368 NP------NYTEFKFPQ---------IKAHPWHKIFHKRMPPEALDLVSRLLQYSPSLRCTALEACAHPFFDDLR 427 (492)
Q Consensus 368 ~~------~~~~~~~~~---------~~~~~~~~~~~~~~s~~~~~Li~~~L~~dP~~R~t~~e~l~Hp~f~~~~ 427 (492)
.. .+.....|. +....-...-...++.++++||.+||++||++|||+.|++.||||+...
T Consensus 232 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~~P~~Rpt~~ell~h~~~~~~~ 306 (333)
T cd06650 232 RPPGRPLSSYGPDSRPPMAIFELLDYIVNEPPPKLPSGVFGAEFQDFVNKCLIKNPAERADLKQLMVHAFIKRSE 306 (333)
T ss_pred CCccchhhhhcccccccccHHHHHHHHhcCCCccCCCCCcCHHHHHHHHHhccCCcccCcCHHHHhhCHHHhcCc
Confidence 00 000000000 0000000000123578899999999999999999999999999998653
No 152
>cd07835 STKc_CDK1_like Catalytic domain of Cyclin-Dependent protein Kinase 1-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 1 (CDK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK1 from higher eukaryotes, plants, and yeasts, as well as CDK2 and CDK3. CDK1 is also called Cell division control protein 2 (Cdc2) or p34 protein kinase, and is regulated by cyclins A, B, and E. The CDK1/cyc
Probab=100.00 E-value=1.6e-42 Score=339.13 Aligned_cols=274 Identities=35% Similarity=0.646 Sum_probs=218.2
Q ss_pred eeEeeeeccCCceEEEEEEEcCCCCEEEEEEeccch------hhHHHHHHHHHHcCCCCccccceeeeeccCCCceEEEE
Q 011138 139 YMAERVVGTGSFGVVFQAKCLETGDSVAIKKVLQDK------RYKNRELQIMRLLNHPNVVSLKHCFFSTTEKDELYLNL 212 (492)
Q Consensus 139 y~~~~~lG~G~fg~Vy~~~~~~~g~~vAiK~~~~~~------~~~~~E~~il~~l~h~nIv~l~~~~~~~~~~~~~~~~l 212 (492)
|.+.+.||.|++|.||+|.+..+|..||+|++..+. ....+|+++++.++||||+++++++ .+..+.|+
T Consensus 1 y~~~~~l~~g~~~~vy~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~E~~~l~~l~~~~iv~~~~~~-----~~~~~~~i 75 (283)
T cd07835 1 YQKVEKIGEGTYGVVYKARDKLTGEIVALKKIRLETEDEGVPSTAIREISLLKELNHPNIVRLLDVV-----HSENKLYL 75 (283)
T ss_pred CchheEecCCCCeEEEEEEEcCCCCEEEEEEeecccccccchhHHHHHHHHHHhcCCCCccCHhhee-----ccCCeEEE
Confidence 567789999999999999999999999999885332 2345799999999999999999988 44457899
Q ss_pred EeeechhhHHHHhhhhhhcCCCcCHHHHHHHHHHHHHHHHHHHhhCCcccCCCCCCceEEcCCCCcEEEeeecCccccCC
Q 011138 213 VLEYISETVYRVSKHYTRMNQHVPILYVQLYTYQICRALNYLHHVVGVCHRDIKPQNLLVNPHTHQLKICDFGSAKMLVP 292 (492)
Q Consensus 213 V~E~~~~~l~~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~yLH~~~givHrDlKp~NILl~~~~~~vkL~DFG~a~~~~~ 292 (492)
||||+++.+...+.... ...+++..+..++.||+.||.|||+ +|++||||+|+||+++.++ .++|+|||++.....
T Consensus 76 v~e~~~~~l~~~~~~~~--~~~~~~~~~~~~~~~i~~~L~~lH~-~~~~H~dl~p~nil~~~~~-~~~l~df~~~~~~~~ 151 (283)
T cd07835 76 VFEFLDLDLKKYMDSSP--LTGLDPPLIKSYLYQLLQGIAYCHS-HRVLHRDLKPQNLLIDREG-ALKLADFGLARAFGV 151 (283)
T ss_pred EEeccCcCHHHHHhhCC--CCCCCHHHHHHHHHHHHHHHHHHHH-CCeeCCCCCHHHEEEcCCC-cEEEeecccccccCC
Confidence 99999877666543321 2468899999999999999999997 8999999999999999877 899999999875432
Q ss_pred CC-CCccceeccCccCchhhcCCCCCCcchhhHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCCHHHHhhcC--C
Q 011138 293 GE-PNISYICSRYYRAPELIFGATEYTTAIDMWSIGCVLAELLLGQPLFPGESGVDQLVEIIKILGTPTREEIKCMN--P 369 (492)
Q Consensus 293 ~~-~~~~~~gt~~y~aPE~~~~~~~~~~~~DvwSlGvil~ell~G~~pf~~~~~~~~~~~i~~~~g~p~~~~~~~~~--~ 369 (492)
.. ......++..|+|||++.+...++.++|+|||||++|+|++|.+||.+.+....+.++.+..+.|....+.... +
T Consensus 152 ~~~~~~~~~~~~~~~aPE~~~~~~~~~~~~Di~slG~~l~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 231 (283)
T cd07835 152 PVRTYTHEVVTLWYRAPEILLGSRQYSTPVDIWSIGCIFAEMVNRRPLFPGDSEIDQLFRIFRTLGTPDEDVWPGVTSLP 231 (283)
T ss_pred CccccCccccccCCCCCceeecCcccCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCChHHhhhhhhch
Confidence 21 22334668899999988766567899999999999999999999999998888888888888888776553221 1
Q ss_pred CCcccCCCcccCCCcccccCCCCChhHhhhhccccccCCCCcCCHHHhhCCCCC
Q 011138 370 NYTEFKFPQIKAHPWHKIFHKRMPPEALDLVSRLLQYSPSLRCTALEACAHPFF 423 (492)
Q Consensus 370 ~~~~~~~~~~~~~~~~~~~~~~~s~~~~~Li~~~L~~dP~~R~t~~e~l~Hp~f 423 (492)
.+. ..++....... ....+.++.++.+||.+||+.||.+|||+.|++.||||
T Consensus 232 ~~~-~~~~~~~~~~~-~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~il~~~~~ 283 (283)
T cd07835 232 DYK-PTFPKWARQDL-SKVVPNLDEDGLDLLSKMLVYDPAKRISAKAALQHPYF 283 (283)
T ss_pred hhh-hhcccccccch-hhhcCCCCHHHHHHHHHHhcCChhhCcCHHHHhcCCCC
Confidence 110 01121111111 11234678999999999999999999999999999998
No 153
>KOG1290 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=2e-42 Score=337.52 Aligned_cols=293 Identities=26% Similarity=0.435 Sum_probs=231.2
Q ss_pred CCCccccceeEeeeeccCCceEEEEEEEcCCCCEEEEEEeccchhhHH---HHHHHHHHcC-----C---CCccccceee
Q 011138 131 GQPKQTISYMAERVVGTGSFGVVFQAKCLETGDSVAIKKVLQDKRYKN---RELQIMRLLN-----H---PNVVSLKHCF 199 (492)
Q Consensus 131 ~~~~~~~~y~~~~~lG~G~fg~Vy~~~~~~~g~~vAiK~~~~~~~~~~---~E~~il~~l~-----h---~nIv~l~~~~ 199 (492)
|......+|.+.++||.|.|++||+|.|..+.+.||+|+++....+.+ .|+++|++++ | .+||+|+++|
T Consensus 72 GD~F~~gRY~v~rKLGWGHFSTVWLawDtq~~r~VAlKVvKSAqhYtEaAlDEIklL~~v~~~Dp~~~~~~~VV~LlD~F 151 (590)
T KOG1290|consen 72 GDVFNGGRYHVQRKLGWGHFSTVWLAWDTQNKRYVALKVVKSAQHYTEAALDEIKLLQQVREGDPNDPGKKCVVQLLDHF 151 (590)
T ss_pred cccccCceEEEEEeccccccceeEEEeeccCCeEEEEEEEehhhHHHHHHHHHHHHHHHHHhcCCCCCCCceeeeeeccc
Confidence 334444679999999999999999999999999999999987766654 5999999884 2 4699999999
Q ss_pred eeccCCCceEEEEEeeechhhHHHHhhhhhhcCCCcCHHHHHHHHHHHHHHHHHHHhhCCcccCCCCCCceEEc------
Q 011138 200 FSTTEKDELYLNLVLEYISETVYRVSKHYTRMNQHVPILYVQLYTYQICRALNYLHHVVGVCHRDIKPQNLLVN------ 273 (492)
Q Consensus 200 ~~~~~~~~~~~~lV~E~~~~~l~~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~yLH~~~givHrDlKp~NILl~------ 273 (492)
...+ .+..++|||+|+++..|+.++.... .+.++...++.|++||+.||.|||...||||-||||+|||+.
T Consensus 152 khsG-pNG~HVCMVfEvLGdnLLklI~~s~--YrGlpl~~VK~I~~qvL~GLdYLH~ecgIIHTDlKPENvLl~~~e~~~ 228 (590)
T KOG1290|consen 152 KHSG-PNGQHVCMVFEVLGDNLLKLIKYSN--YRGLPLSCVKEICRQVLTGLDYLHRECGIIHTDLKPENVLLCSTEIDP 228 (590)
T ss_pred eecC-CCCcEEEEEehhhhhHHHHHHHHhC--CCCCcHHHHHHHHHHHHHHHHHHHHhcCccccCCCcceeeeeccccch
Confidence 7666 5667899999999999999887644 467999999999999999999999878999999999999984
Q ss_pred --------------------------------------------------------------------------------
Q 011138 274 -------------------------------------------------------------------------------- 273 (492)
Q Consensus 274 -------------------------------------------------------------------------------- 273 (492)
T Consensus 229 ~~~~~~a~e~~~~~p~~s~s~~~t~~d~~~~~~~~~~s~~~~k~~~kk~~r~~~~~~~~l~~~~~~~~~~~~~s~n~~~~ 308 (590)
T KOG1290|consen 229 AKDAREAGEATTSLPKMSPSAVSTRPDALQRMAAEPMSKSKFKKMKKKLKRQAKKLEASLAGLEGIEEEPNQESYNNEPR 308 (590)
T ss_pred hhhhhhhccccccCCCCCcccccccccccchhhccccchhhHHHHHHHHhhhhhhhhhhhcccccccccccccccccccC
Confidence
Q ss_pred ----------------------------CC--------------------------------------------------
Q 011138 274 ----------------------------PH-------------------------------------------------- 275 (492)
Q Consensus 274 ----------------------------~~-------------------------------------------------- 275 (492)
+.
T Consensus 309 ~n~~~~~v~~~~~~~~~~~~~~~~n~~~k~~e~~~~~~~sl~~~~~~~~~t~~~~~~~s~~s~~~~~~n~~v~p~~~~~~ 388 (590)
T KOG1290|consen 309 INGNESTVERSTLEEDSNENGNRENLPIKSPENFRGNNTSLPESQLRDSATPSDGSLSSPSSPGTIASNPLVNPDIPLPE 388 (590)
T ss_pred CCccccchhhcccccccccccCCccccccCccccccccccccchhcccccccccccccCcCCccccccccccCCCCCCCc
Confidence 00
Q ss_pred -CCcEEEeeecCccccCCCCCCccceeccCccCchhhcCCCCCCcchhhHHHHHHHHHHHhCCCCCCCC------ChHHH
Q 011138 276 -THQLKICDFGSAKMLVPGEPNISYICSRYYRAPELIFGATEYTTAIDMWSIGCVLAELLLGQPLFPGE------SGVDQ 348 (492)
Q Consensus 276 -~~~vkL~DFG~a~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DvwSlGvil~ell~G~~pf~~~------~~~~~ 348 (492)
.-.|||+|||.|... ....+..+.|..|+|||++.|.+ |+..+||||++|++|||+||..+|... .+.+.
T Consensus 389 ~di~vKIaDlGNACW~--~khFT~DIQTRQYRapEVllGsg-Y~~~ADiWS~AC~~FELaTGDyLFePhsG~~Y~rDEDH 465 (590)
T KOG1290|consen 389 CDIRVKIADLGNACWV--HKHFTEDIQTRQYRAPEVLLGSG-YSTSADIWSTACMAFELATGDYLFEPHSGENYSRDEDH 465 (590)
T ss_pred cceeEEEeeccchhhh--hhhhchhhhhhhccCcceeecCC-CCCchhHHHHHHHHHHhhcCceeecCCCCCCCCccHHH
Confidence 003677888877654 23344567799999999999876 999999999999999999999999643 36788
Q ss_pred HHHHHHHhCCCCHHHHhhcC-------CCCcccCCCcccCCCccccc------CCCCChhHhhhhccccccCCCCcCCHH
Q 011138 349 LVEIIKILGTPTREEIKCMN-------PNYTEFKFPQIKAHPWHKIF------HKRMPPEALDLVSRLLQYSPSLRCTAL 415 (492)
Q Consensus 349 ~~~i~~~~g~p~~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~------~~~~s~~~~~Li~~~L~~dP~~R~t~~ 415 (492)
++.|+..+|..+........ ..-.-.-+..++.+++..++ ...-..++.|||.-||+++|++|+||.
T Consensus 466 iA~i~ELLG~iPr~ia~~Gk~SRdFFnr~G~LrhI~~LK~WpL~~VL~eKY~~s~e~A~~fsdFL~PmLef~PeKR~tA~ 545 (590)
T KOG1290|consen 466 IALIMELLGKIPRKIALGGKYSRDFFNRRGELRHIRRLKPWPLYEVLIEKYEWSEEDAQQFSDFLSPMLEFDPEKRPTAA 545 (590)
T ss_pred HHHHHHHHhhccHHHHhcCcchHhhhccccceecccccCCCcHHHHHHHHhCCCHHHHHHHHHHHHHHHhcCccccccHH
Confidence 99999999998876553211 11000112233333333322 222345678999999999999999999
Q ss_pred HhhCCCCCCCCCCC
Q 011138 416 EACAHPFFDDLRDP 429 (492)
Q Consensus 416 e~l~Hp~f~~~~~~ 429 (492)
++|+|||+..+..+
T Consensus 546 ~cl~hPwLn~~~~~ 559 (590)
T KOG1290|consen 546 QCLKHPWLNPVAGP 559 (590)
T ss_pred HHhcCccccCCCCC
Confidence 99999999987654
No 154
>KOG0983 consensus Mitogen-activated protein kinase (MAPK) kinase MKK7/JNKK2 [Signal transduction mechanisms]
Probab=100.00 E-value=2.8e-43 Score=321.02 Aligned_cols=261 Identities=26% Similarity=0.414 Sum_probs=208.6
Q ss_pred CCccccceeEeeeeccCCceEEEEEEEcCCCCEEEEEEeccchhhH-----HHHHHHHHHc-CCCCccccceeeeeccCC
Q 011138 132 QPKQTISYMAERVVGTGSFGVVFQAKCLETGDSVAIKKVLQDKRYK-----NRELQIMRLL-NHPNVVSLKHCFFSTTEK 205 (492)
Q Consensus 132 ~~~~~~~y~~~~~lG~G~fg~Vy~~~~~~~g~~vAiK~~~~~~~~~-----~~E~~il~~l-~h~nIv~l~~~~~~~~~~ 205 (492)
.+...+..+....||.|+.|+|+++..+.+|...|||.+.+..... .+.+.++... +.|+||+.+++|....+
T Consensus 87 ~~~dindl~~l~dlGsGtcG~V~k~~~rs~~~iiAVK~M~rt~Nkee~kRILmDldvv~~s~dcpyIV~c~GyFi~n~d- 165 (391)
T KOG0983|consen 87 YQADINDLENLGDLGSGTCGQVWKMRFRSTGHIIAVKQMRRTGNKEENKRILMDLDVVLKSHDCPYIVQCFGYFITNTD- 165 (391)
T ss_pred cccChHHhhhHHhhcCCCccceEEEEEcccceEEEEEeecccCCHHHHHHHHHhhhHHhhccCCCeeeeeeeEEeeCch-
Confidence 3344445667778999999999999999999999999986543221 1234443333 48999999999977655
Q ss_pred CceEEEEEeeechhhHHHHhhhhhhcCCCcCHHHHHHHHHHHHHHHHHHHhhCCcccCCCCCCceEEcCCCCcEEEeeec
Q 011138 206 DELYLNLVLEYISETVYRVSKHYTRMNQHVPILYVQLYTYQICRALNYLHHVVGVCHRDIKPQNLLVNPHTHQLKICDFG 285 (492)
Q Consensus 206 ~~~~~~lV~E~~~~~l~~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~yLH~~~givHrDlKp~NILl~~~~~~vkL~DFG 285 (492)
+++.||.|..-...+++ +..+++|+..+-.+...++.||.||...+||+|||+||+|||+|..| ++||||||
T Consensus 166 ----V~IcMelMs~C~ekLlk---rik~piPE~ilGk~tva~v~AL~YLKeKH~viHRDvKPSNILlDe~G-niKlCDFG 237 (391)
T KOG0983|consen 166 ----VFICMELMSTCAEKLLK---RIKGPIPERILGKMTVAIVKALYYLKEKHGVIHRDVKPSNILLDERG-NIKLCDFG 237 (391)
T ss_pred ----HHHHHHHHHHHHHHHHH---HhcCCchHHhhhhhHHHHHHHHHHHHHhcceeecccCccceEEccCC-CEEeeccc
Confidence 77899998754444333 34567999999999999999999999778999999999999999888 89999999
Q ss_pred CccccCCCCCCccceeccCccCchhhcC--CCCCCcchhhHHHHHHHHHHHhCCCCCCCCC-hHHHHHHHHHHhCCCCHH
Q 011138 286 SAKMLVPGEPNISYICSRYYRAPELIFG--ATEYTTAIDMWSIGCVLAELLLGQPLFPGES-GVDQLVEIIKILGTPTRE 362 (492)
Q Consensus 286 ~a~~~~~~~~~~~~~gt~~y~aPE~~~~--~~~~~~~~DvwSlGvil~ell~G~~pf~~~~-~~~~~~~i~~~~g~p~~~ 362 (492)
++..+......+...|.+.|||||.+.- ...|+-.+||||||++|+||.||+.||.+.+ +-+.+.++.+. .|+
T Consensus 238 IsGrlvdSkAhtrsAGC~~YMaPERidp~~~~kYDiRaDVWSlGITlveLaTg~yPy~~c~tdFe~ltkvln~--ePP-- 313 (391)
T KOG0983|consen 238 ISGRLVDSKAHTRSAGCAAYMAPERIDPPDKPKYDIRADVWSLGITLVELATGQYPYKGCKTDFEVLTKVLNE--EPP-- 313 (391)
T ss_pred ccceeecccccccccCCccccCccccCCCCCCccchhhhhhhhccchhhhhcccCCCCCCCccHHHHHHHHhc--CCC--
Confidence 9998887777888899999999999842 3458999999999999999999999999854 44555555441 111
Q ss_pred HHhhcCCCCcccCCCcccCCCcccccCCCCChhHhhhhccccccCCCCcCCHHHhhCCCCCCCCC
Q 011138 363 EIKCMNPNYTEFKFPQIKAHPWHKIFHKRMPPEALDLVSRLLQYSPSLRCTALEACAHPFFDDLR 427 (492)
Q Consensus 363 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~Li~~~L~~dP~~R~t~~e~l~Hp~f~~~~ 427 (492)
.+| .....|+++.+|+..||++|+.+||...++|+|||+..+.
T Consensus 314 ------------~L~----------~~~gFSp~F~~fv~~CL~kd~r~RP~Y~~Ll~h~Fi~~ye 356 (391)
T KOG0983|consen 314 ------------LLP----------GHMGFSPDFQSFVKDCLTKDHRKRPKYNKLLEHPFIKRYE 356 (391)
T ss_pred ------------CCC----------cccCcCHHHHHHHHHHhhcCcccCcchHHHhcCcceeecc
Confidence 011 1134799999999999999999999999999999998764
No 155
>KOG4236 consensus Serine/threonine protein kinase PKC mu/PKD and related proteins [Signal transduction mechanisms]
Probab=100.00 E-value=1.8e-44 Score=353.65 Aligned_cols=249 Identities=30% Similarity=0.554 Sum_probs=211.0
Q ss_pred eeeeccCCceEEEEEEEcCCCCEEEEEEecc------chhhHHHHHHHHHHcCCCCccccceeeeeccCCCceEEEEEee
Q 011138 142 ERVVGTGSFGVVFQAKCLETGDSVAIKKVLQ------DKRYKNRELQIMRLLNHPNVVSLKHCFFSTTEKDELYLNLVLE 215 (492)
Q Consensus 142 ~~~lG~G~fg~Vy~~~~~~~g~~vAiK~~~~------~~~~~~~E~~il~~l~h~nIv~l~~~~~~~~~~~~~~~~lV~E 215 (492)
.++||+|.||+||-|+.+.+|+.||||+|.+ .+..+++|+.||+.+.||.||.+.-.| +....+++|||
T Consensus 569 devLGSGQFG~VYgg~hRktGrdVAvKvIdKlrFp~kqesqlR~EVaILq~l~HPGiV~le~M~-----ET~ervFVVME 643 (888)
T KOG4236|consen 569 DEVLGSGQFGTVYGGKHRKTGRDVAVKVIDKLRFPTKQESQLRNEVAILQNLHHPGIVNLECMF-----ETPERVFVVME 643 (888)
T ss_pred HhhccCCcceeeecceecccCceeeeeeeecccCCCchHHHHHHHHHHHHhcCCCCeeEEEEee-----cCCceEEEEeh
Confidence 4789999999999999999999999999843 346677899999999999999997766 33335889999
Q ss_pred echhhHHHHhhhhhhcCCCcCHHHHHHHHHHHHHHHHHHHhhCCcccCCCCCCceEEcCCC--CcEEEeeecCccccCCC
Q 011138 216 YISETVYRVSKHYTRMNQHVPILYVQLYTYQICRALNYLHHVVGVCHRDIKPQNLLVNPHT--HQLKICDFGSAKMLVPG 293 (492)
Q Consensus 216 ~~~~~l~~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~yLH~~~givHrDlKp~NILl~~~~--~~vkL~DFG~a~~~~~~ 293 (492)
-+.|+.+..+.... ...+++...++++.||+.||.|||. +||||+||||+|||+.... .++||||||+|+++...
T Consensus 644 Kl~GDMLEMILSsE--kgRL~er~TkFlvtQIL~ALr~LH~-knIvHCDLKPENVLLas~~~FPQvKlCDFGfARiIgEk 720 (888)
T KOG4236|consen 644 KLHGDMLEMILSSE--KGRLPERITKFLVTQILVALRYLHF-KNIVHCDLKPENVLLASASPFPQVKLCDFGFARIIGEK 720 (888)
T ss_pred hhcchHHHHHHHhh--cccchHHHHHHHHHHHHHHHHHhhh-cceeeccCCchheeeccCCCCCceeeccccceeecchh
Confidence 99999998776533 4679999999999999999999997 9999999999999996543 47999999999999777
Q ss_pred CCCccceeccCccCchhhcCCCCCCcchhhHHHHHHHHHHHhCCCCCCCCC-hHHHHHHHHHHhCCCCHHHHhhcCCCCc
Q 011138 294 EPNISYICSRYYRAPELIFGATEYTTAIDMWSIGCVLAELLLGQPLFPGES-GVDQLVEIIKILGTPTREEIKCMNPNYT 372 (492)
Q Consensus 294 ~~~~~~~gt~~y~aPE~~~~~~~~~~~~DvwSlGvil~ell~G~~pf~~~~-~~~~~~~i~~~~g~p~~~~~~~~~~~~~ 372 (492)
.-..+.+|||.|+|||++... .|+..-|+||+|||+|--|.|..||..+. ..+++++ .
T Consensus 721 sFRrsVVGTPAYLaPEVLrnk-GyNrSLDMWSVGVIiYVsLSGTFPFNEdEdIndQIQN--------------------A 779 (888)
T KOG4236|consen 721 SFRRSVVGTPAYLAPEVLRNK-GYNRSLDMWSVGVIIYVSLSGTFPFNEDEDINDQIQN--------------------A 779 (888)
T ss_pred hhhhhhcCCccccCHHHHhhc-cccccccceeeeEEEEEEecccccCCCccchhHHhhc--------------------c
Confidence 777889999999999999755 49999999999999999999999995432 2233222 1
Q ss_pred ccCCCcccCCCcccccCCCCChhHhhhhccccccCCCCcCCHHHhhCCCCCCCCC
Q 011138 373 EFKFPQIKAHPWHKIFHKRMPPEALDLVSRLLQYSPSLRCTALEACAHPFFDDLR 427 (492)
Q Consensus 373 ~~~~~~~~~~~~~~~~~~~~s~~~~~Li~~~L~~dP~~R~t~~e~l~Hp~f~~~~ 427 (492)
.+-+| ..+| +.+++++.|||..+|+..-++|.+.++.|.|||++++.
T Consensus 780 aFMyP---p~PW-----~eis~~AidlIn~LLqVkm~kRysvdk~lsh~Wlq~yq 826 (888)
T KOG4236|consen 780 AFMYP---PNPW-----SEISPEAIDLINNLLQVKMRKRYSVDKSLSHPWLQDYQ 826 (888)
T ss_pred ccccC---CCch-----hhcCHHHHHHHHHHHHHHHHHhcchHhhccchhhhcch
Confidence 22222 3455 45899999999999999999999999999999999765
No 156
>cd07833 STKc_CDKL Catalytic domain of Cyclin-Dependent protein Kinase Like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like (CDKL) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDKL1-5 and similar proteins. Some CDKLs, like CDKL1 and CDKL3, may be implicated in transformation and others, like CDKL3 and CDKL5, are associated with mental retardation when impaired. CDKL2 plays a role in learning
Probab=100.00 E-value=2.6e-42 Score=338.13 Aligned_cols=276 Identities=38% Similarity=0.684 Sum_probs=222.9
Q ss_pred ceeEeeeeccCCceEEEEEEEcCCCCEEEEEEeccc------hhhHHHHHHHHHHcCCCCccccceeeeeccCCCceEEE
Q 011138 138 SYMAERVVGTGSFGVVFQAKCLETGDSVAIKKVLQD------KRYKNRELQIMRLLNHPNVVSLKHCFFSTTEKDELYLN 211 (492)
Q Consensus 138 ~y~~~~~lG~G~fg~Vy~~~~~~~g~~vAiK~~~~~------~~~~~~E~~il~~l~h~nIv~l~~~~~~~~~~~~~~~~ 211 (492)
+|.+.+.||+|+||.||+|.+..+++.||+|.+... .....+|+++++.++|+||+++++++.. ....+
T Consensus 2 ~y~~~~~i~~g~~~~v~~~~~~~~~~~v~vK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~-----~~~~~ 76 (288)
T cd07833 2 KYEVLGVVGEGAYGVVLKCRNKATGEIVAIKKFKESEDDEDVKKTALREVKVLRQLRHENIVNLKEAFRR-----KGRLY 76 (288)
T ss_pred ceeEEEEecccCCeeEEEEEeCCCCcEEEEehhhhhcccccchhHHHHHHHHHHhcCCCCeeehhheEEE-----CCEEE
Confidence 599999999999999999999999999999987532 2345679999999999999999999843 44689
Q ss_pred EEeeechhhHHHHhhhhhhcCCCcCHHHHHHHHHHHHHHHHHHHhhCCcccCCCCCCceEEcCCCCcEEEeeecCccccC
Q 011138 212 LVLEYISETVYRVSKHYTRMNQHVPILYVQLYTYQICRALNYLHHVVGVCHRDIKPQNLLVNPHTHQLKICDFGSAKMLV 291 (492)
Q Consensus 212 lV~E~~~~~l~~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~yLH~~~givHrDlKp~NILl~~~~~~vkL~DFG~a~~~~ 291 (492)
+||||++++++.... .....+++..+..++.||+.||.|||+ .||+||||+|+||+++.++ .+||+|||++....
T Consensus 77 iv~e~~~~~~l~~~~---~~~~~~~~~~~~~~~~~i~~~l~~LH~-~~i~H~dl~~~ni~~~~~~-~~kl~d~g~~~~~~ 151 (288)
T cd07833 77 LVFEYVERTLLELLE---ASPGGLPPDAVRSYIWQLLQAIAYCHS-HNIIHRDIKPENILVSESG-VLKLCDFGFARALR 151 (288)
T ss_pred EEEecCCCCHHHHHH---hcCCCCCHHHHHHHHHHHHHHHHHHHH-CCeecCCCCHHHeEECCCC-CEEEEeeecccccC
Confidence 999999987766433 223558899999999999999999997 8999999999999999877 79999999988765
Q ss_pred CCC--CCccceeccCccCchhhcCCCCCCcchhhHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCCHHHHhhc--
Q 011138 292 PGE--PNISYICSRYYRAPELIFGATEYTTAIDMWSIGCVLAELLLGQPLFPGESGVDQLVEIIKILGTPTREEIKCM-- 367 (492)
Q Consensus 292 ~~~--~~~~~~gt~~y~aPE~~~~~~~~~~~~DvwSlGvil~ell~G~~pf~~~~~~~~~~~i~~~~g~p~~~~~~~~-- 367 (492)
... ......++..|+|||++.+...++.++|+|||||++|+|++|++||.+.+..+.+..+...++.........+
T Consensus 152 ~~~~~~~~~~~~~~~~~~PE~~~~~~~~~~~~Dv~slG~~l~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 231 (288)
T cd07833 152 ARPASPLTDYVATRWYRAPELLVGDTNYGKPVDVWAIGCIMAELLDGEPLFPGDSDIDQLYLIQKCLGPLPPSHQELFSS 231 (288)
T ss_pred CCccccccCcccccCCcCCchhcCCCCcCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCCHHHhhhccc
Confidence 443 3345678899999999977646899999999999999999999999998888888888887776665444322
Q ss_pred CCCCcccCCCcccCC-CcccccCCCCChhHhhhhccccccCCCCcCCHHHhhCCCCC
Q 011138 368 NPNYTEFKFPQIKAH-PWHKIFHKRMPPEALDLVSRLLQYSPSLRCTALEACAHPFF 423 (492)
Q Consensus 368 ~~~~~~~~~~~~~~~-~~~~~~~~~~s~~~~~Li~~~L~~dP~~R~t~~e~l~Hp~f 423 (492)
++.+....++..... .+...++..++.++++||++||..||++||++.+++.||||
T Consensus 232 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~il~~~~f 288 (288)
T cd07833 232 NPRFAGVAFPEPSQPESLERRYPGKVSSPALDFLKACLRMDPKERLTCDELLQHPYF 288 (288)
T ss_pred CccccccccCCCCCcHHHHHhcCCccchHHHHHHHHHhccCchhcccHHHHhcCCCC
Confidence 222222233322111 12223444568999999999999999999999999999998
No 157
>cd07857 STKc_MPK1 Catalytic domain of the Serine/Threonine Kinase, Fungal Mitogen-Activated Protein Kinase MPK1. Serine/Threonine Kinases (STKs), Fungal Mitogen-Activated Protein Kinase (MAPK) MPK1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MPK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the MAPKs MPK1 from Saccharomyces cerevisiae, Pmk1 from Schizosaccharomyces pombe, and similar proteins. MAPKs are important mediators of cellular responses to extracellular signals. MPK1 (also called Slt2) and Pmk1 (also called Spm1) are stress-activated MAPKs that regulate the cell wall integrity (CWI) pathway, and are therefore important in the maintainance of cell shape, cell wall co
Probab=100.00 E-value=3.3e-42 Score=345.25 Aligned_cols=286 Identities=36% Similarity=0.612 Sum_probs=224.9
Q ss_pred ceeEeeeeccCCceEEEEEEEcCC--CCEEEEEEeccc------hhhHHHHHHHHHHc-CCCCccccceeeeeccCCCce
Q 011138 138 SYMAERVVGTGSFGVVFQAKCLET--GDSVAIKKVLQD------KRYKNRELQIMRLL-NHPNVVSLKHCFFSTTEKDEL 208 (492)
Q Consensus 138 ~y~~~~~lG~G~fg~Vy~~~~~~~--g~~vAiK~~~~~------~~~~~~E~~il~~l-~h~nIv~l~~~~~~~~~~~~~ 208 (492)
+|.+.+.||+|+||.||++.+..+ +..||||++... .....+|+.+++.+ +||||+++++++.... ....
T Consensus 1 ~y~~~~~lg~G~~g~vy~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~-~~~~ 79 (332)
T cd07857 1 RYELIKELGQGAYGIVCSARNAETSEEETVAIKKITNVFSKKILAKRALRELKLLRHFRGHKNITCLYDMDIVFP-GNFN 79 (332)
T ss_pred CceEEEEccccCCeEEEEEEeCCCCcCceEEEEEeccccccchhHHHHHHHHHHHHHhcCCCChheeeeeeeecc-ccCC
Confidence 488999999999999999999888 999999987532 12345799999999 5999999998754332 2334
Q ss_pred EEEEEeeechhhHHHHhhhhhhcCCCcCHHHHHHHHHHHHHHHHHHHhhCCcccCCCCCCceEEcCCCCcEEEeeecCcc
Q 011138 209 YLNLVLEYISETVYRVSKHYTRMNQHVPILYVQLYTYQICRALNYLHHVVGVCHRDIKPQNLLVNPHTHQLKICDFGSAK 288 (492)
Q Consensus 209 ~~~lV~E~~~~~l~~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~yLH~~~givHrDlKp~NILl~~~~~~vkL~DFG~a~ 288 (492)
.+|++|||+++++...+. ....+++..++.++.||+.||.|||+ +||+||||||+|||++.++ .+||+|||+++
T Consensus 80 ~~~~~~e~~~~~L~~~l~----~~~~~~~~~~~~~~~qi~~aL~~LH~-~givH~dlkp~Nili~~~~-~~kl~Dfg~a~ 153 (332)
T cd07857 80 ELYLYEELMEADLHQIIR----SGQPLTDAHFQSFIYQILCGLKYIHS-ANVLHRDLKPGNLLVNADC-ELKICDFGLAR 153 (332)
T ss_pred cEEEEEecccCCHHHHHh----cCCCCCHHHHHHHHHHHHHHHHHHHh-CCcccCCCCHHHeEEcCCC-CEEeCcCCCce
Confidence 578999999987766543 24568899999999999999999997 9999999999999999887 79999999997
Q ss_pred ccCCCC-----CCccceeccCccCchhhcCCCCCCcchhhHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCCHHH
Q 011138 289 MLVPGE-----PNISYICSRYYRAPELIFGATEYTTAIDMWSIGCVLAELLLGQPLFPGESGVDQLVEIIKILGTPTREE 363 (492)
Q Consensus 289 ~~~~~~-----~~~~~~gt~~y~aPE~~~~~~~~~~~~DvwSlGvil~ell~G~~pf~~~~~~~~~~~i~~~~g~p~~~~ 363 (492)
...... ......||..|+|||.+.+...++.++|||||||++|+|++|.+||.+.+....+..++..+|.|+.+.
T Consensus 154 ~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~~Di~slGv~l~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~ 233 (332)
T cd07857 154 GFSENPGENAGFMTEYVATRWYRAPEIMLSFQSYTKAIDVWSVGCILAELLGRKPVFKGKDYVDQLNQILQVLGTPDEET 233 (332)
T ss_pred ecccccccccccccCcccCccccCcHHHhCCCCCCcHHHHHHHHHHHHHHHhCCcCCCCCCHHHHHHHHHHHhCCCCHHH
Confidence 653221 122357899999999987656689999999999999999999999999998899999999999888765
Q ss_pred HhhcCCCC-cc--cCCCcccCCCcccccCCCCChhHhhhhccccccCCCCcCCHHHhhCCCCCCCCCCCCC
Q 011138 364 IKCMNPNY-TE--FKFPQIKAHPWHKIFHKRMPPEALDLVSRLLQYSPSLRCTALEACAHPFFDDLRDPNT 431 (492)
Q Consensus 364 ~~~~~~~~-~~--~~~~~~~~~~~~~~~~~~~s~~~~~Li~~~L~~dP~~R~t~~e~l~Hp~f~~~~~~~~ 431 (492)
+..+.... .. ..+.......+.. ..+.++.++.+||.+||+.||.+|||+.+++.||||+.++++..
T Consensus 234 ~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~li~~~l~~~P~~R~t~~~ll~~~~~~~~~~~~~ 303 (332)
T cd07857 234 LSRIGSPKAQNYIRSLPNIPKKPFES-IFPNANPLALDLLEKLLAFDPTKRISVEEALEHPYLAIWHDPDD 303 (332)
T ss_pred HHhhhhhhHHHHHHhccccCCcchHh-hCCCCCHHHHHHHHHHccCCcccCCCHHHHhcChhhhhhcCccc
Confidence 54332110 00 0011111111111 12346889999999999999999999999999999999887543
No 158
>cd07879 STKc_p38delta_MAPK13 Catalytic domain of the Serine/Threonine Kinase, p38delta Mitogen-Activated Protein Kinase. Serine/Threonine Kinases (STKs), p38delta subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38delta subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38delta, also called MAPK13
Probab=100.00 E-value=3.8e-42 Score=346.26 Aligned_cols=283 Identities=34% Similarity=0.622 Sum_probs=223.0
Q ss_pred cceeEeeeeccCCceEEEEEEEcCCCCEEEEEEeccc------hhhHHHHHHHHHHcCCCCccccceeeeeccC-CCceE
Q 011138 137 ISYMAERVVGTGSFGVVFQAKCLETGDSVAIKKVLQD------KRYKNRELQIMRLLNHPNVVSLKHCFFSTTE-KDELY 209 (492)
Q Consensus 137 ~~y~~~~~lG~G~fg~Vy~~~~~~~g~~vAiK~~~~~------~~~~~~E~~il~~l~h~nIv~l~~~~~~~~~-~~~~~ 209 (492)
.+|.+.+.||+|+||.||+|.+..+|+.||||++... .....+|+.+++.++||||++++++|..... .....
T Consensus 15 ~~y~~~~~ig~g~~g~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~~~~~ 94 (342)
T cd07879 15 ERYTSLKQVGSGAYGSVCSAIDKRTGEKVAIKKLSRPFQSEIFAKRAYRELTLLKHMQHENVIGLLDVFTSAVSGDEFQD 94 (342)
T ss_pred cceEEEEEeeecCCeEEEEEEeCCCCcEEEEEEecCccccccchhHHHHHHHHHHhcCCCCccchhheecccccCCCCce
Confidence 4699999999999999999999999999999988542 1234579999999999999999998854332 22334
Q ss_pred EEEEeeechhhHHHHhhhhhhcCCCcCHHHHHHHHHHHHHHHHHHHhhCCcccCCCCCCceEEcCCCCcEEEeeecCccc
Q 011138 210 LNLVLEYISETVYRVSKHYTRMNQHVPILYVQLYTYQICRALNYLHHVVGVCHRDIKPQNLLVNPHTHQLKICDFGSAKM 289 (492)
Q Consensus 210 ~~lV~E~~~~~l~~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~yLH~~~givHrDlKp~NILl~~~~~~vkL~DFG~a~~ 289 (492)
+|+||||+...+.... ...+++..+..++.||+.||.|||+ +||+||||||+|||++.++ .+||+|||+++.
T Consensus 95 ~~lv~e~~~~~l~~~~------~~~~~~~~~~~~~~qi~~aL~~LH~-~~i~H~dlkp~NIll~~~~-~~kL~dfg~~~~ 166 (342)
T cd07879 95 FYLVMPYMQTDLQKIM------GHPLSEDKVQYLVYQMLCGLKYIHS-AGIIHRDLKPGNLAVNEDC-ELKILDFGLARH 166 (342)
T ss_pred EEEEecccccCHHHHH------cCCCCHHHHHHHHHHHHHHHHHHHH-CCcccCCCCHHHEEECCCC-CEEEeeCCCCcC
Confidence 6899999986544321 2458889999999999999999997 9999999999999999887 899999999875
Q ss_pred cCCCCCCccceeccCccCchhhcCCCCCCcchhhHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCCHHHHhhcCC
Q 011138 290 LVPGEPNISYICSRYYRAPELIFGATEYTTAIDMWSIGCVLAELLLGQPLFPGESGVDQLVEIIKILGTPTREEIKCMNP 369 (492)
Q Consensus 290 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DvwSlGvil~ell~G~~pf~~~~~~~~~~~i~~~~g~p~~~~~~~~~~ 369 (492)
.. .......+++.|+|||++.+...++.++|||||||++|+|++|+.||.+.+....+..++...|.+....+.....
T Consensus 167 ~~--~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slGvil~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 244 (342)
T cd07879 167 AD--AEMTGYVVTRWYRAPEVILNWMHYNQTVDIWSVGCIMAEMLTGKTLFKGKDYLDQLTQILKVTGVPGPEFVQKLED 244 (342)
T ss_pred CC--CCCCCceeeecccChhhhcCccccCchHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhcCCCCHHHHHHhcc
Confidence 42 2334567899999999987655689999999999999999999999999888888888888888777665443321
Q ss_pred CCcc---cCCCcccCCCcccccCCCCChhHhhhhccccccCCCCcCCHHHhhCCCCCCCCCCCC
Q 011138 370 NYTE---FKFPQIKAHPWHKIFHKRMPPEALDLVSRLLQYSPSLRCTALEACAHPFFDDLRDPN 430 (492)
Q Consensus 370 ~~~~---~~~~~~~~~~~~~~~~~~~s~~~~~Li~~~L~~dP~~R~t~~e~l~Hp~f~~~~~~~ 430 (492)
.... ...+......+.. ..+.+++++.+||.+||+.||.+||++.+++.||||+.+++..
T Consensus 245 ~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~li~~~l~~dP~~R~~~~e~l~h~~f~~~~~~~ 307 (342)
T cd07879 245 KAAKSYIKSLPKYPRKDFST-LFPKASPQAVDLLEKMLELDVDKRLTATEALEHPYFDSFRDAD 307 (342)
T ss_pred cchHHHHhhcCCcccchHHH-HhcCCCHHHHHHHHHHcCCChhhCcCHHHHhcCcchhhccccc
Confidence 1000 0111111111211 1234788999999999999999999999999999999987643
No 159
>PTZ00024 cyclin-dependent protein kinase; Provisional
Probab=100.00 E-value=2.6e-42 Score=346.33 Aligned_cols=277 Identities=36% Similarity=0.570 Sum_probs=219.9
Q ss_pred cee-EeeeeccCCceEEEEEEEcCCCCEEEEEEeccchh------------------hHHHHHHHHHHcCCCCcccccee
Q 011138 138 SYM-AERVVGTGSFGVVFQAKCLETGDSVAIKKVLQDKR------------------YKNRELQIMRLLNHPNVVSLKHC 198 (492)
Q Consensus 138 ~y~-~~~~lG~G~fg~Vy~~~~~~~g~~vAiK~~~~~~~------------------~~~~E~~il~~l~h~nIv~l~~~ 198 (492)
+|. +.+.||.|+||+||+|.+..+++.||||++..... ...+|+++++.++|+||++++++
T Consensus 9 ry~~~~~~ig~G~~g~vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~ 88 (335)
T PTZ00024 9 RYIQKGAHLGEGTYGKVEKAYDTLTGKIVAIKKVKIIEISNDVTKDRQLVGMCGIHFTTLRELKIMNEIKHENIMGLVDV 88 (335)
T ss_pred chhhhhhcccCCCceeEEEEEECCCCCeEEEEEeeccccccccccchhhhcccccchhHHHHHHHHHhCCCcceeeeeEE
Confidence 465 45789999999999999999999999998753211 24579999999999999999998
Q ss_pred eeeccCCCceEEEEEeeechhhHHHHhhhhhhcCCCcCHHHHHHHHHHHHHHHHHHHhhCCcccCCCCCCceEEcCCCCc
Q 011138 199 FFSTTEKDELYLNLVLEYISETVYRVSKHYTRMNQHVPILYVQLYTYQICRALNYLHHVVGVCHRDIKPQNLLVNPHTHQ 278 (492)
Q Consensus 199 ~~~~~~~~~~~~~lV~E~~~~~l~~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~yLH~~~givHrDlKp~NILl~~~~~~ 278 (492)
+. ...+.|+||||+.+++...+.. ...+++..+..++.||+.||.|||+ +||+||||||+||+++.++ .
T Consensus 89 ~~-----~~~~~~lv~e~~~~~l~~~l~~----~~~~~~~~~~~~~~ql~~aL~~LH~-~~i~H~dl~~~nill~~~~-~ 157 (335)
T PTZ00024 89 YV-----EGDFINLVMDIMASDLKKVVDR----KIRLTESQVKCILLQILNGLNVLHK-WYFMHRDLSPANIFINSKG-I 157 (335)
T ss_pred Ee-----cCCcEEEEEeccccCHHHHHHh----cCCCCHHHHHHHHHHHHHHHHHHHh-CCeecccccHHHeEECCCC-C
Confidence 83 4446899999999887765543 3458889999999999999999997 9999999999999999887 7
Q ss_pred EEEeeecCccccCC---------------CCCCccceeccCccCchhhcCCCCCCcchhhHHHHHHHHHHHhCCCCCCCC
Q 011138 279 LKICDFGSAKMLVP---------------GEPNISYICSRYYRAPELIFGATEYTTAIDMWSIGCVLAELLLGQPLFPGE 343 (492)
Q Consensus 279 vkL~DFG~a~~~~~---------------~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DvwSlGvil~ell~G~~pf~~~ 343 (492)
+||+|||++..... ........+++.|+|||.+.+...++.++|+|||||++|+|++|.+||.+.
T Consensus 158 ~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~~l~el~tg~~p~~~~ 237 (335)
T PTZ00024 158 CKIADFGLARRYGYPPYSDTLSKDETMQRREEMTSKVVTLWYRAPELLMGAEKYHFAVDMWSVGCIFAELLTGKPLFPGE 237 (335)
T ss_pred EEECCccceeecccccccccccccccccccccccccccccCCCCChhcccCCCCCcHHHHHHHHHHHHHHHhCCCCCCCC
Confidence 99999999876531 111123456889999999977666899999999999999999999999999
Q ss_pred ChHHHHHHHHHHhCCCCHHHHhhcC--CCCcccCCCcccCCCcccccCCCCChhHhhhhccccccCCCCcCCHHHhhCCC
Q 011138 344 SGVDQLVEIIKILGTPTREEIKCMN--PNYTEFKFPQIKAHPWHKIFHKRMPPEALDLVSRLLQYSPSLRCTALEACAHP 421 (492)
Q Consensus 344 ~~~~~~~~i~~~~g~p~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~Li~~~L~~dP~~R~t~~e~l~Hp 421 (492)
+..+.+..+...++.|....+.... +.+..+... ...... ......+.++.+||.+||+.||++||+++|++.||
T Consensus 238 ~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~-~~~~~~~~~~~~li~~~l~~~P~~R~s~~~~l~~~ 314 (335)
T PTZ00024 238 NEIDQLGRIFELLGTPNEDNWPQAKKLPLYTEFTPR--KPKDLK-TIFPNASDDAIDLLQSLLKLNPLERISAKEALKHE 314 (335)
T ss_pred CHHHHHHHHHHHhCCCchhhCcchhhcccccccCcC--CcccHH-HhCcCCChHHHHHHHHHcCCCchhccCHHHHhcCc
Confidence 9999999999999888776554321 111111100 000011 11234688999999999999999999999999999
Q ss_pred CCCCCCC
Q 011138 422 FFDDLRD 428 (492)
Q Consensus 422 ~f~~~~~ 428 (492)
||+....
T Consensus 315 ~~~~~~~ 321 (335)
T PTZ00024 315 YFKSDPL 321 (335)
T ss_pred ccCCCCC
Confidence 9997643
No 160
>cd06625 STKc_MEKK3_like Catalytic domain of MAP/ERK kinase kinase 3-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MEKK3, MEKK2, and related proteins, all containing an N-terminal PB1 domain, which mediates oligomerization, and a C-terminal catalytic domain. MEKK2 and MEKK3 are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks), proteins that phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades t
Probab=100.00 E-value=2.4e-42 Score=333.88 Aligned_cols=247 Identities=27% Similarity=0.453 Sum_probs=200.6
Q ss_pred ceeEeeeeccCCceEEEEEEEcCCCCEEEEEEeccch---------hhHHHHHHHHHHcCCCCccccceeeeeccCCCce
Q 011138 138 SYMAERVVGTGSFGVVFQAKCLETGDSVAIKKVLQDK---------RYKNRELQIMRLLNHPNVVSLKHCFFSTTEKDEL 208 (492)
Q Consensus 138 ~y~~~~~lG~G~fg~Vy~~~~~~~g~~vAiK~~~~~~---------~~~~~E~~il~~l~h~nIv~l~~~~~~~~~~~~~ 208 (492)
+|.+.+.||+|+||.||.|.+..+++.||+|.+.... ....+|+.+++.++||||+++++++ .+..
T Consensus 3 ~~~~~~~lg~g~~~~vy~~~~~~~~~~~~lk~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~-----~~~~ 77 (263)
T cd06625 3 NWRRGKLLGQGAFGRVYLCYDVDTGRELAVKQVPFDPDSPETKKEVNALECEIQLLKNLQHERIVQYYGCL-----RDDE 77 (263)
T ss_pred cccccceecCCCceEEEEEEEcCCCcEEEEEEEeecccchhhHHHHHHHHHHHHHHHhCCCCCeeeeEEEE-----ccCC
Confidence 5899999999999999999999999999999875321 2345799999999999999999998 4444
Q ss_pred EEEEEeeechhh-HHHHhhhhhhcCCCcCHHHHHHHHHHHHHHHHHHHhhCCcccCCCCCCceEEcCCCCcEEEeeecCc
Q 011138 209 YLNLVLEYISET-VYRVSKHYTRMNQHVPILYVQLYTYQICRALNYLHHVVGVCHRDIKPQNLLVNPHTHQLKICDFGSA 287 (492)
Q Consensus 209 ~~~lV~E~~~~~-l~~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~yLH~~~givHrDlKp~NILl~~~~~~vkL~DFG~a 287 (492)
.+++||||++++ +.+.+.. ...+++..+..++.||+.||.|||+ .||+||||||+||+++.++ .++|+|||++
T Consensus 78 ~~~~v~e~~~~~~l~~~~~~----~~~~~~~~~~~~~~~l~~~l~~lH~-~~i~H~dl~p~nilv~~~~-~~~l~dfg~~ 151 (263)
T cd06625 78 TLSIFMEYMPGGSVKDQLKA----YGALTETVTRKYTRQILEGVEYLHS-NMIVHRDIKGANILRDSAG-NVKLGDFGAS 151 (263)
T ss_pred eEEEEEEECCCCcHHHHHHH----hCCCCHHHHHHHHHHHHHHHHHHHh-CCeecCCCCHHHEEEcCCC-CEEEeecccc
Confidence 799999999865 4343322 3467888899999999999999997 8999999999999999877 7999999998
Q ss_pred cccCCCCCC----ccceeccCccCchhhcCCCCCCcchhhHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCCHHH
Q 011138 288 KMLVPGEPN----ISYICSRYYRAPELIFGATEYTTAIDMWSIGCVLAELLLGQPLFPGESGVDQLVEIIKILGTPTREE 363 (492)
Q Consensus 288 ~~~~~~~~~----~~~~gt~~y~aPE~~~~~~~~~~~~DvwSlGvil~ell~G~~pf~~~~~~~~~~~i~~~~g~p~~~~ 363 (492)
+........ ....++..|+|||++.+.. ++.++|||||||++|+|++|+.||...+.......+....
T Consensus 152 ~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~-~~~~~Di~slG~il~el~~g~~p~~~~~~~~~~~~~~~~~------- 223 (263)
T cd06625 152 KRLQTICSSGTGMKSVTGTPYWMSPEVISGEG-YGRKADVWSVGCTVVEMLTEKPPWAEFEAMAAIFKIATQP------- 223 (263)
T ss_pred eeccccccccccccCCCcCccccCcceeccCC-CCchhhhHHHHHHHHHHHhCCCCccccchHHHHHHHhccC-------
Confidence 765332211 2356788999999997654 8999999999999999999999998766554444332210
Q ss_pred HhhcCCCCcccCCCcccCCCcccccCCCCChhHhhhhccccccCCCCcCCHHHhhCCCCC
Q 011138 364 IKCMNPNYTEFKFPQIKAHPWHKIFHKRMPPEALDLVSRLLQYSPSLRCTALEACAHPFF 423 (492)
Q Consensus 364 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~Li~~~L~~dP~~R~t~~e~l~Hp~f 423 (492)
....++..++.++.+||.+||..||.+|||+.++++||||
T Consensus 224 --------------------~~~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~ll~~~~~ 263 (263)
T cd06625 224 --------------------TNPQLPSHVSPDARNFLRRTFVENAKKRPSAEELLRHFFV 263 (263)
T ss_pred --------------------CCCCCCccCCHHHHHHHHHHhhcCcccCCCHHHHhhCCCC
Confidence 0011234578999999999999999999999999999998
No 161
>cd06617 PKc_MKK3_6 Catalytic domain of the dual-specificity Protein Kinases, MAP kinase kinases 3 and 6. Protein kinases (PKs), MAP kinase kinase 3 (MKK3) and MKK6 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK3 and MKK6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK3 and MKK6 are dual-specificity PKs
Probab=100.00 E-value=2.2e-42 Score=337.89 Aligned_cols=256 Identities=27% Similarity=0.426 Sum_probs=202.7
Q ss_pred ceeEeeeeccCCceEEEEEEEcCCCCEEEEEEeccch-----hhHHHHHHH-HHHcCCCCccccceeeeeccCCCceEEE
Q 011138 138 SYMAERVVGTGSFGVVFQAKCLETGDSVAIKKVLQDK-----RYKNRELQI-MRLLNHPNVVSLKHCFFSTTEKDELYLN 211 (492)
Q Consensus 138 ~y~~~~~lG~G~fg~Vy~~~~~~~g~~vAiK~~~~~~-----~~~~~E~~i-l~~l~h~nIv~l~~~~~~~~~~~~~~~~ 211 (492)
+|.+.+.||+|+||.||+|.+..+|+.||||.+.... .....|+.+ ++.++||||+++++++. ....+|
T Consensus 2 ~~~~~~~ig~g~~g~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~~~~~~~~~~iv~~~~~~~-----~~~~~~ 76 (283)
T cd06617 2 DLEVIEELGRGAYGVVDKMRHVPTGTIMAVKRIRATVNSQEQKRLLMDLDISMRSVDCPYTVTFYGALF-----REGDVW 76 (283)
T ss_pred CceEEEEecccCCeEEEEEEEcCCCcEEEEEEEecCCCcHHHHHHHHHHHHHHHHcCCCCeeeeeEEEe-----cCCcEE
Confidence 5899999999999999999999999999999885432 122235554 67788999999999884 334589
Q ss_pred EEeeechhhHHHHhhhhhhcCCCcCHHHHHHHHHHHHHHHHHHHhhC-CcccCCCCCCceEEcCCCCcEEEeeecCcccc
Q 011138 212 LVLEYISETVYRVSKHYTRMNQHVPILYVQLYTYQICRALNYLHHVV-GVCHRDIKPQNLLVNPHTHQLKICDFGSAKML 290 (492)
Q Consensus 212 lV~E~~~~~l~~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~yLH~~~-givHrDlKp~NILl~~~~~~vkL~DFG~a~~~ 290 (492)
+||||+++++..++.........+++..+..++.||+.||.|||+ + +++||||||+|||++.++ .+||+|||++...
T Consensus 77 lv~e~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~-~~~i~h~dlkp~nil~~~~~-~~kl~dfg~~~~~ 154 (283)
T cd06617 77 ICMEVMDTSLDKFYKKVYDKGLTIPEDILGKIAVSIVKALEYLHS-KLSVIHRDVKPSNVLINRNG-QVKLCDFGISGYL 154 (283)
T ss_pred EEhhhhcccHHHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHhh-cCCeecCCCCHHHEEECCCC-CEEEeeccccccc
Confidence 999999988777665544445678999999999999999999997 6 999999999999999887 7999999999865
Q ss_pred CCCCCCccceeccCccCchhhcCC---CCCCcchhhHHHHHHHHHHHhCCCCCCCC-ChHHHHHHHHHHhCCCCHHHHhh
Q 011138 291 VPGEPNISYICSRYYRAPELIFGA---TEYTTAIDMWSIGCVLAELLLGQPLFPGE-SGVDQLVEIIKILGTPTREEIKC 366 (492)
Q Consensus 291 ~~~~~~~~~~gt~~y~aPE~~~~~---~~~~~~~DvwSlGvil~ell~G~~pf~~~-~~~~~~~~i~~~~g~p~~~~~~~ 366 (492)
..........++..|+|||++.+. ..++.++|+|||||++|+|++|+.||... ...+.+..+... .
T Consensus 155 ~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~~~~~~~~~~--~-------- 224 (283)
T cd06617 155 VDSVAKTIDAGCKPYMAPERINPELNQKGYDVKSDVWSLGITMIELATGRFPYDSWKTPFQQLKQVVEE--P-------- 224 (283)
T ss_pred ccccccccccCCccccChhhcCCcccccccCccccchhhHHHHHHHHhCCCCCCccccCHHHHHHHHhc--C--------
Confidence 433333345788999999988542 34688999999999999999999999653 223333333220 0
Q ss_pred cCCCCcccCCCcccCCCcccccCCCCChhHhhhhccccccCCCCcCCHHHhhCCCCCCCCC
Q 011138 367 MNPNYTEFKFPQIKAHPWHKIFHKRMPPEALDLVSRLLQYSPSLRCTALEACAHPFFDDLR 427 (492)
Q Consensus 367 ~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~Li~~~L~~dP~~R~t~~e~l~Hp~f~~~~ 427 (492)
...++ ...+++++.+||.+||..||.+||++.+++.||||....
T Consensus 225 ------~~~~~-----------~~~~~~~l~~li~~~l~~~p~~Rp~~~~il~~~~~~~~~ 268 (283)
T cd06617 225 ------SPQLP-----------AEKFSPEFQDFVNKCLKKNYKERPNYPELLQHPFFELHL 268 (283)
T ss_pred ------CCCCC-----------ccccCHHHHHHHHHHccCChhhCcCHHHHhcCchhhhcc
Confidence 00111 123688999999999999999999999999999999754
No 162
>KOG0586 consensus Serine/threonine protein kinase [General function prediction only]
Probab=100.00 E-value=1.9e-43 Score=355.05 Aligned_cols=262 Identities=29% Similarity=0.426 Sum_probs=218.0
Q ss_pred ccccceeEeeeeccCCceEEEEEEEcCCCCEEEEEEeccch------hhHHHHHHHHHHcCCCCccccceeeeeccCCCc
Q 011138 134 KQTISYMAERVVGTGSFGVVFQAKCLETGDSVAIKKVLQDK------RYKNRELQIMRLLNHPNVVSLKHCFFSTTEKDE 207 (492)
Q Consensus 134 ~~~~~y~~~~~lG~G~fg~Vy~~~~~~~g~~vAiK~~~~~~------~~~~~E~~il~~l~h~nIv~l~~~~~~~~~~~~ 207 (492)
.....|.+.+.||+|.|++|.+|++..+|..||||.+.+.. ....+|+++|+.|+|||||+++.+.. ..
T Consensus 53 ~~vg~y~i~~tig~g~f~~V~La~~~~t~~~VaiK~idkt~ln~~~~~k~~rev~imk~l~HPnIvkl~~v~~-----t~ 127 (596)
T KOG0586|consen 53 NSVGLYVIIKTIGKGNFAKVKLARHILTGTEVAIKIIDKTQLNPSKRQKLGREVDIMKSLNHPNIVKLFSVIE-----TE 127 (596)
T ss_pred ccccceeeeeeeccceeEEEEeeEecCCCceEEEEEehhcccChHHHHHHHHHHHHHHhcCCcceeeeeeeee-----ec
Confidence 34456999999999999999999999999999999986542 22458999999999999999999984 34
Q ss_pred eEEEEEeeechhh-HHHHhhhhhhcCCCcCHHHHHHHHHHHHHHHHHHHhhCCcccCCCCCCceEEcCCCCcEEEeeecC
Q 011138 208 LYLNLVLEYISET-VYRVSKHYTRMNQHVPILYVQLYTYQICRALNYLHHVVGVCHRDIKPQNLLVNPHTHQLKICDFGS 286 (492)
Q Consensus 208 ~~~~lV~E~~~~~-l~~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~yLH~~~givHrDlKp~NILl~~~~~~vkL~DFG~ 286 (492)
..+|+||||+.++ +.+. ...+..+.+..++.++.|+++|++|||+ ++|||||||.+||||+.+. ++||+|||+
T Consensus 128 ~~lylV~eya~~ge~~~y----l~~~gr~~e~~ar~~F~q~vsaveYcH~-k~ivHrdLk~eNilL~~~m-nikIaDfgf 201 (596)
T KOG0586|consen 128 ATLYLVMEYASGGELFDY----LVKHGRMKEKEARAKFRQIVSAVEYCHS-KNIVHRDLKAENILLDENM-NIKIADFGF 201 (596)
T ss_pred ceeEEEEEeccCchhHHH----HHhcccchhhhhhhhhHHHHHHHHHHhh-cceeccccchhhccccccc-ceeeecccc
Confidence 4599999999865 3333 3334556668899999999999999997 9999999999999999988 799999999
Q ss_pred ccccCCCCCCccceeccCccCchhhcCCCCCCcchhhHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCCHHHHhh
Q 011138 287 AKMLVPGEPNISYICSRYYRAPELIFGATEYTTAIDMWSIGCVLAELLLGQPLFPGESGVDQLVEIIKILGTPTREEIKC 366 (492)
Q Consensus 287 a~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DvwSlGvil~ell~G~~pf~~~~~~~~~~~i~~~~g~p~~~~~~~ 366 (492)
+..+..+....+++|++.|.|||++.|..+.++.+|+||+|++||.|+.|..||++.+-.+.-...+.
T Consensus 202 S~~~~~~~~lqt~cgsppyAaPEl~~g~~y~gpe~D~Wslgvvly~LV~GsLPFDG~~lk~Lr~rvl~------------ 269 (596)
T KOG0586|consen 202 STFFDYGLMLQTFCGSPPYAAPELFNGKKYDGPEVDIWSLGVVLYALVEGSLPFDGQNLKELRPRVLR------------ 269 (596)
T ss_pred ceeecccccccccCCCCCccChHhhcCcccCCcceehhhhhhhheeeeecccccCCcccccccchhee------------
Confidence 99998888888999999999999999998889999999999999999999999998764322111111
Q ss_pred cCCCCcccCCCcccCCCcccccCCCCChhHhhhhccccccCCCCcCCHHHhhCCCCCCCCCCCCCCCCC
Q 011138 367 MNPNYTEFKFPQIKAHPWHKIFHKRMPPEALDLVSRLLQYSPSLRCTALEACAHPFFDDLRDPNTCLPN 435 (492)
Q Consensus 367 ~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~Li~~~L~~dP~~R~t~~e~l~Hp~f~~~~~~~~~~~~ 435 (492)
..+.+| --++.++.+||+++|..+|.+|++.++++.|.|.........+.+.
T Consensus 270 -----gk~rIp------------~~ms~dce~lLrk~lvl~Pskr~~~dqim~~~W~n~~~~~~~l~p~ 321 (596)
T KOG0586|consen 270 -----GKYRIP------------FYMSCDCEDLLRKFLVLNPSKRGPCDQIMKDRWRNDLLEARLLAPL 321 (596)
T ss_pred -----eeeccc------------ceeechhHHHHHHhhccCccccCCHHHhhhhcccchhhhhhhhhcc
Confidence 112222 2378899999999999999999999999999999876654333333
No 163
>KOG1989 consensus ARK protein kinase family [Signal transduction mechanisms]
Probab=100.00 E-value=3.7e-43 Score=366.98 Aligned_cols=248 Identities=25% Similarity=0.449 Sum_probs=199.3
Q ss_pred cceeEeeeeccCCceEEEEEEEcCCCCEEEEEEecc-ch---hhHHHHHHHHHHcC-CCCccccce-eeeeccCCC-ceE
Q 011138 137 ISYMAERVVGTGSFGVVFQAKCLETGDSVAIKKVLQ-DK---RYKNRELQIMRLLN-HPNVVSLKH-CFFSTTEKD-ELY 209 (492)
Q Consensus 137 ~~y~~~~~lG~G~fg~Vy~~~~~~~g~~vAiK~~~~-~~---~~~~~E~~il~~l~-h~nIv~l~~-~~~~~~~~~-~~~ 209 (492)
.++++.++|.+|||+.||+|.+...|..||+|++.. ++ ....+|+++|++|. |+|||.+++ +........ ..-
T Consensus 37 ~~v~V~~vLAEGGFa~VYla~~~~~~~~~AlKrm~~~de~~L~~v~~EI~~MK~L~gh~nIV~yidss~~~~~~~~~~~E 116 (738)
T KOG1989|consen 37 HRVTVEKVLAEGGFAQVYLAQDVKGGKKYALKRMYVNDEEALNAVKREIDIMKLLSGHKNIVSYIDSSAINRSSNNGVWE 116 (738)
T ss_pred EEEEEEEEEccCCcEEEEEEEecCCCceeeeeeeecCCHHHHHHHHHHHHHHHHhcCCCceeeEeccccccccCCCceeE
Confidence 368999999999999999999998889999998743 33 33468999999997 999999999 444433333 355
Q ss_pred EEEEeeech-hhHHHHhhhhhhcCCCcCHHHHHHHHHHHHHHHHHHHhhCC--cccCCCCCCceEEcCCCCcEEEeeecC
Q 011138 210 LNLVLEYIS-ETVYRVSKHYTRMNQHVPILYVQLYTYQICRALNYLHHVVG--VCHRDIKPQNLLVNPHTHQLKICDFGS 286 (492)
Q Consensus 210 ~~lV~E~~~-~~l~~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~yLH~~~g--ivHrDlKp~NILl~~~~~~vkL~DFG~ 286 (492)
+.|.||||. |+|.+++..+.. ..|.+.++..|++|+++|+.+||. .. |||||||-|||||+.++ ..||||||.
T Consensus 117 vllLmEyC~gg~Lvd~mn~Rlq--~~lte~eVLkIf~dv~~AVa~mH~-~~pPiIHRDLKiENvLls~~g-~~KLCDFGS 192 (738)
T KOG1989|consen 117 VLLLMEYCKGGSLVDFMNTRLQ--TRLTEDEVLKIFYDVCEAVAAMHY-LKPPIIHRDLKIENVLLSADG-NYKLCDFGS 192 (738)
T ss_pred EEeehhhccCCcHHHHHHHHHh--ccCChHHHHHHHHHHHHHHHHHhc-CCCccchhhhhhhheEEcCCC-CEEeCcccc
Confidence 779999999 688888775443 449999999999999999999996 66 99999999999999888 799999999
Q ss_pred ccccCCCCCC----------ccceeccCccCchhhc--CCCCCCcchhhHHHHHHHHHHHhCCCCCCCCChHHHHHHHHH
Q 011138 287 AKMLVPGEPN----------ISYICSRYYRAPELIF--GATEYTTAIDMWSIGCVLAELLLGQPLFPGESGVDQLVEIIK 354 (492)
Q Consensus 287 a~~~~~~~~~----------~~~~gt~~y~aPE~~~--~~~~~~~~~DvwSlGvil~ell~G~~pf~~~~~~~~~~~i~~ 354 (492)
|.-....... +....|+.|+|||+|. .....+.|+|||||||+||-|+....||...... .|+.
T Consensus 193 att~~~~~~~~~e~~~ve~eI~k~TTp~YRsPEMIDlysg~pI~eKsDIWALGclLYkLCy~t~PFe~sg~l----aIln 268 (738)
T KOG1989|consen 193 ATTKILSPTSAQEVNYVEEEIEKYTTPQYRSPEMIDLYSGLPIGEKSDIWALGCLLYKLCYFTTPFEESGKL----AILN 268 (738)
T ss_pred cccccCCCccHHHHHHHHHHHHhhCCccccChHHHhhhcCCCCcchhHHHHHHHHHHHHHHhCCCcCcCcce----eEEe
Confidence 8644222211 1234589999999983 3455899999999999999999999999775432 1221
Q ss_pred HhCCCCHHHHhhcCCCCcccCCCcccCCCcccccCCCCChhHhhhhccccccCCCCcCCHHHhhC
Q 011138 355 ILGTPTREEIKCMNPNYTEFKFPQIKAHPWHKIFHKRMPPEALDLVSRLLQYSPSLRCTALEACA 419 (492)
Q Consensus 355 ~~g~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~Li~~~L~~dP~~R~t~~e~l~ 419 (492)
..|.||.. +.++..+++||+.||+.||.+||++.|++.
T Consensus 269 -----------------g~Y~~P~~----------p~ys~~l~~LI~~mL~~nP~~RPnI~Qv~~ 306 (738)
T KOG1989|consen 269 -----------------GNYSFPPF----------PNYSDRLKDLIRTMLQPNPDERPNIYQVLE 306 (738)
T ss_pred -----------------ccccCCCC----------ccHHHHHHHHHHHHhccCcccCCCHHHHHH
Confidence 34455542 357899999999999999999999998874
No 164
>cd05118 STKc_CMGC Catalytic domain of CMGC family Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), CMGC family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CMGC family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The CMGC family consists of Cyclin-Dependent protein Kinases (CDKs), Mitogen-activated protein kinases (MAPKs) such as Extracellular signal-regulated kinase (ERKs), c-Jun N-terminal kinases (JNKs), and p38, and similar proteins. CDKs belong to a large subfamily of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. MAPKs serve as important mediators of cellular responses to extracellular signals. They
Probab=100.00 E-value=2.2e-42 Score=337.57 Aligned_cols=274 Identities=39% Similarity=0.739 Sum_probs=222.8
Q ss_pred eeEeeeeccCCceEEEEEEEcCCCCEEEEEEeccch------hhHHHHHHHHHHcCCCCccccceeeeeccCCCceEEEE
Q 011138 139 YMAERVVGTGSFGVVFQAKCLETGDSVAIKKVLQDK------RYKNRELQIMRLLNHPNVVSLKHCFFSTTEKDELYLNL 212 (492)
Q Consensus 139 y~~~~~lG~G~fg~Vy~~~~~~~g~~vAiK~~~~~~------~~~~~E~~il~~l~h~nIv~l~~~~~~~~~~~~~~~~l 212 (492)
|.+.+.||.|++|.||+|.+..+|+.+++|.+.... ....+|+.+++.++|+||+++++++ .+...+++
T Consensus 1 y~~~~~i~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~-----~~~~~~~~ 75 (283)
T cd05118 1 YQKLGKIGEGTYGVVYKARDKLTGEIVAIKKIKLRFESEGIPKTALREIKLLKELNHPNIIKLLDVF-----RHKGDLYL 75 (283)
T ss_pred CccceeeecCCCceEEEEEcCCCCcEEEEEEeccccccchhHHHHHHHHHHHHHhcCCCcchHHHhh-----ccCCCEEE
Confidence 567788999999999999999999999999875432 2345799999999999999999988 34456889
Q ss_pred EeeechhhHHHHhhhhhhcCCCcCHHHHHHHHHHHHHHHHHHHhhCCcccCCCCCCceEEcCCCCcEEEeeecCccccCC
Q 011138 213 VLEYISETVYRVSKHYTRMNQHVPILYVQLYTYQICRALNYLHHVVGVCHRDIKPQNLLVNPHTHQLKICDFGSAKMLVP 292 (492)
Q Consensus 213 V~E~~~~~l~~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~yLH~~~givHrDlKp~NILl~~~~~~vkL~DFG~a~~~~~ 292 (492)
||||+++++...+.. ....+++..+..++.||+.||.|||+ +||+|+||||+||+++.++ .+||+|||.+.....
T Consensus 76 v~e~~~~~l~~~l~~---~~~~~~~~~~~~~~~~i~~~l~~LH~-~~i~H~dl~p~nili~~~~-~~~l~df~~~~~~~~ 150 (283)
T cd05118 76 VFEFMDTDLYKLIKD---RQRGLPESLIKSYLYQLLQGLAFCHS-HGILHRDLKPENLLINTEG-VLKLADFGLARSFGS 150 (283)
T ss_pred EEeccCCCHHHHHHh---hcccCCHHHHHHHHHHHHHHHHHHHH-CCeeecCcCHHHEEECCCC-cEEEeeeeeeEecCC
Confidence 999999877665443 23578899999999999999999997 9999999999999999877 799999999976644
Q ss_pred CC-CCccceeccCccCchhhcCCCCCCcchhhHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCCHHHHhhcCC--
Q 011138 293 GE-PNISYICSRYYRAPELIFGATEYTTAIDMWSIGCVLAELLLGQPLFPGESGVDQLVEIIKILGTPTREEIKCMNP-- 369 (492)
Q Consensus 293 ~~-~~~~~~gt~~y~aPE~~~~~~~~~~~~DvwSlGvil~ell~G~~pf~~~~~~~~~~~i~~~~g~p~~~~~~~~~~-- 369 (492)
.. ......++..|+|||.+.+...++.++|+|||||++|+|++|+.||.+.+..+.+..+...++.+..+.+.....
T Consensus 151 ~~~~~~~~~~~~~~~~PE~~~~~~~~~~~~Di~slG~~l~~l~tg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 230 (283)
T cd05118 151 PVRPYTHYVVTRWYRAPELLLGDKGYSTPVDIWSVGCIFAELLSRRPLFPGKSEIDQLFKIFRTLGTPDPEVWPKFTSLA 230 (283)
T ss_pred CcccccCccCcccccCcHHHhcCCCCCchhHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHcCCCchHhcccchhhh
Confidence 33 233456788999999997765689999999999999999999999999999899999988888887776655433
Q ss_pred CCcccCCCcccCCCcccccCCCCChhHhhhhccccccCCCCcCCHHHhhCCCCC
Q 011138 370 NYTEFKFPQIKAHPWHKIFHKRMPPEALDLVSRLLQYSPSLRCTALEACAHPFF 423 (492)
Q Consensus 370 ~~~~~~~~~~~~~~~~~~~~~~~s~~~~~Li~~~L~~dP~~R~t~~e~l~Hp~f 423 (492)
......++....... ....+.++.++++||.+||..||.+||++.++++||||
T Consensus 231 ~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~i~~~l~~~P~~Rp~~~~ll~~~~~ 283 (283)
T cd05118 231 RNYKFSFPKKAGMPL-PKLFPNASPQALDLLSQMLHYDPHKRITAEQALAHPYF 283 (283)
T ss_pred hhhhhhhccccccCH-HHhhhhhCHHHHHHHHHHhccCcccCcCHHHHhhCCCC
Confidence 122223332222111 11234578999999999999999999999999999997
No 165
>cd07852 STKc_MAPK15 Catalytic domain of the Serine/Threonine Kinase, Mitogen-Activated Protein Kinase 15. Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase 15 (MAPK15) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK15 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. Human MAPK15 is also called Extracellular signal Regulated Kinase 8 (ERK8) while the rat protein is called ERK7. ERK7 and ERK8 display both similar and different biochemical properties. They autophosphorylate and activate themselves and do not require upstream activating kinases. ERK7 is constitutively active and is not affected by extracellular stimul
Probab=100.00 E-value=2.3e-42 Score=347.10 Aligned_cols=286 Identities=35% Similarity=0.670 Sum_probs=226.1
Q ss_pred ccceeEeeeeccCCceEEEEEEEcCCCCEEEEEEeccc------hhhHHHHHHHHHHc-CCCCccccceeeeeccCCCce
Q 011138 136 TISYMAERVVGTGSFGVVFQAKCLETGDSVAIKKVLQD------KRYKNRELQIMRLL-NHPNVVSLKHCFFSTTEKDEL 208 (492)
Q Consensus 136 ~~~y~~~~~lG~G~fg~Vy~~~~~~~g~~vAiK~~~~~------~~~~~~E~~il~~l-~h~nIv~l~~~~~~~~~~~~~ 208 (492)
..+|.+.+.||+|+||.||+|.+..+|+.||||++... .....+|+.+++.+ +||||+++++++.. .+..
T Consensus 6 ~~~y~~~~~lg~g~~~~v~~~~~~~~~~~~~vK~~~~~~~~~~~~~~~~~E~~~l~~l~~h~ni~~~~~~~~~---~~~~ 82 (337)
T cd07852 6 LRKYEILQKLGKGAYGIVWKAIDRRTKEVVALKKIFDAFRNATDAQRTFREIMFLQELGDHPNIVKLLNVIKA---ENDK 82 (337)
T ss_pred hhHHHHhHhhcCCCCeeEEEEEEcCCCeEEEEEeeccccCcchhhhhhhHHHHHHHHhcCCCCccceeeeecc---CCCc
Confidence 34699999999999999999999999999999987432 12344799999999 99999999998743 2334
Q ss_pred EEEEEeeechhhHHHHhhhhhhcCCCcCHHHHHHHHHHHHHHHHHHHhhCCcccCCCCCCceEEcCCCCcEEEeeecCcc
Q 011138 209 YLNLVLEYISETVYRVSKHYTRMNQHVPILYVQLYTYQICRALNYLHHVVGVCHRDIKPQNLLVNPHTHQLKICDFGSAK 288 (492)
Q Consensus 209 ~~~lV~E~~~~~l~~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~yLH~~~givHrDlKp~NILl~~~~~~vkL~DFG~a~ 288 (492)
.+|+||||+.+++...+.. ..+.+..++.++.||+.||.|||+ +||+||||||+||+++.++ .+||+|||++.
T Consensus 83 ~~~lv~e~~~~~L~~~~~~-----~~~~~~~~~~i~~qi~~~L~~LH~-~~i~H~dl~p~nill~~~~-~~kl~d~g~~~ 155 (337)
T cd07852 83 DIYLVFEYMETDLHAVIRA-----NILEDVHKRYIMYQLLKALKYIHS-GNVIHRDLKPSNILLNSDC-RVKLADFGLAR 155 (337)
T ss_pred eEEEEecccccCHHHHHhc-----CCCCHHHHHHHHHHHHHHHHHHHH-CCeecCCCCHHHEEEcCCC-cEEEeeccchh
Confidence 5789999999876654432 267788888999999999999997 9999999999999999888 89999999997
Q ss_pred ccCCCC------CCccceeccCccCchhhcCCCCCCcchhhHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCCHH
Q 011138 289 MLVPGE------PNISYICSRYYRAPELIFGATEYTTAIDMWSIGCVLAELLLGQPLFPGESGVDQLVEIIKILGTPTRE 362 (492)
Q Consensus 289 ~~~~~~------~~~~~~gt~~y~aPE~~~~~~~~~~~~DvwSlGvil~ell~G~~pf~~~~~~~~~~~i~~~~g~p~~~ 362 (492)
...... ......||..|+|||.+.+...++.++|+|||||++|+|++|++||.+....+....+....+.+..+
T Consensus 156 ~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~sDi~slG~~l~el~tg~~pf~~~~~~~~~~~~~~~~~~~~~~ 235 (337)
T cd07852 156 SLSELEENPENPVLTDYVATRWYRAPEILLGSTRYTKGVDMWSVGCILGEMLLGKPLFPGTSTLNQLEKIIEVIGPPSAE 235 (337)
T ss_pred ccccccccccCcchhcccccccccCceeeeccccccccchHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCCHH
Confidence 654322 22245789999999998766668899999999999999999999999999888888888888888776
Q ss_pred HHhhcCCCCcccCC---CcccCCCcccccCCCCChhHhhhhccccccCCCCcCCHHHhhCCCCCCCCCCCCCC
Q 011138 363 EIKCMNPNYTEFKF---PQIKAHPWHKIFHKRMPPEALDLVSRLLQYSPSLRCTALEACAHPFFDDLRDPNTC 432 (492)
Q Consensus 363 ~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~s~~~~~Li~~~L~~dP~~R~t~~e~l~Hp~f~~~~~~~~~ 432 (492)
.+..+........+ +......... ..+.++.++.+||.+||+.||++|||+.++++||||+.+..+...
T Consensus 236 ~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~l~~li~~~l~~~P~~Rps~~~il~~~~~~~~~~~~~~ 307 (337)
T cd07852 236 DIESIKSPFAATMLDSLPSRPRKPLDE-LLPKASDDALDLLKKLLVFNPNKRLTAEEALEHPYVAQFHNPSDE 307 (337)
T ss_pred HHHHHHhhhHHHhhhhcccccccchhh-hccCCCHHHHHHHHHhccCCcccccCHHHHhhChhhhhhccCCCC
Confidence 55443322111111 1111111111 223478999999999999999999999999999999998765443
No 166
>cd06622 PKc_MAPKK_PBS2_like Catalytic domain of fungal PBS2-like dual-specificity MAP kinase kinases. Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, fungal PBS2-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include
Probab=100.00 E-value=2.3e-42 Score=338.60 Aligned_cols=260 Identities=26% Similarity=0.409 Sum_probs=204.2
Q ss_pred ceeEeeeeccCCceEEEEEEEcCCCCEEEEEEeccc-----hhhHHHHHHHHHHcCCCCccccceeeeeccCCCceEEEE
Q 011138 138 SYMAERVVGTGSFGVVFQAKCLETGDSVAIKKVLQD-----KRYKNRELQIMRLLNHPNVVSLKHCFFSTTEKDELYLNL 212 (492)
Q Consensus 138 ~y~~~~~lG~G~fg~Vy~~~~~~~g~~vAiK~~~~~-----~~~~~~E~~il~~l~h~nIv~l~~~~~~~~~~~~~~~~l 212 (492)
+|++.+.||+|+||.||+|.+..+|..||+|.+... .....+|+.+++.++|+||+++++++ ....++|+
T Consensus 2 ~~~~~~~ig~g~~g~v~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~-----~~~~~~~l 76 (286)
T cd06622 2 EIEVLDELGKGNYGSVYKVLHRPTGVTMAMKEIRLELDESKFNQIIMELDILHKAVSPYIVDFYGAF-----FIEGAVYM 76 (286)
T ss_pred hhhhhhhhcccCCeEEEEEEEcCCCcEEEEEEeecccCHHHHHHHHHHHHHHHhcCCCcHHhhhhhe-----ecCCeEEE
Confidence 588899999999999999999999999999987542 12345799999999999999999988 34456899
Q ss_pred EeeechhhHHHHhhhhhhcCCCcCHHHHHHHHHHHHHHHHHHHhhCCcccCCCCCCceEEcCCCCcEEEeeecCccccCC
Q 011138 213 VLEYISETVYRVSKHYTRMNQHVPILYVQLYTYQICRALNYLHHVVGVCHRDIKPQNLLVNPHTHQLKICDFGSAKMLVP 292 (492)
Q Consensus 213 V~E~~~~~l~~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~yLH~~~givHrDlKp~NILl~~~~~~vkL~DFG~a~~~~~ 292 (492)
||||++++.+..+.........+++..+..++.||+.||.|||+..||+||||||+||+++.++ .+||+|||++.....
T Consensus 77 v~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~LH~~~~i~H~dl~p~nil~~~~~-~~~l~dfg~~~~~~~ 155 (286)
T cd06622 77 CMEYMDAGSLDKLYAGGVATEGIPEDVLRRITYAVVKGLKFLKEEHNIIHRDVKPTNVLVNGNG-QVKLCDFGVSGNLVA 155 (286)
T ss_pred EEeecCCCCHHHHHHhccccCCCCHHHHHHHHHHHHHHHHHHHhcCCEeeCCCCHHHEEECCCC-CEEEeecCCcccccC
Confidence 9999997644432222222347899999999999999999999535999999999999999877 799999999876532
Q ss_pred CCCCccceeccCccCchhhcCCC-----CCCcchhhHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCCHHHHhhc
Q 011138 293 GEPNISYICSRYYRAPELIFGAT-----EYTTAIDMWSIGCVLAELLLGQPLFPGESGVDQLVEIIKILGTPTREEIKCM 367 (492)
Q Consensus 293 ~~~~~~~~gt~~y~aPE~~~~~~-----~~~~~~DvwSlGvil~ell~G~~pf~~~~~~~~~~~i~~~~g~p~~~~~~~~ 367 (492)
. ......+++.|+|||.+.+.. .++.++|+|||||++|+|++|..||...........+......+.
T Consensus 156 ~-~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~------- 227 (286)
T cd06622 156 S-LAKTNIGCQSYMAPERIKSGGPNQNPTYTVQSDVWSLGLSILEMALGRYPYPPETYANIFAQLSAIVDGDP------- 227 (286)
T ss_pred C-ccccCCCccCccCcchhcCCCCCccCCCCcccchHhHHHHHHHHHhCCCCCCCcchhhHHHHHHHHhhcCC-------
Confidence 2 223456888999999985432 358899999999999999999999977554333332222111100
Q ss_pred CCCCcccCCCcccCCCcccccCCCCChhHhhhhccccccCCCCcCCHHHhhCCCCCCCCCCC
Q 011138 368 NPNYTEFKFPQIKAHPWHKIFHKRMPPEALDLVSRLLQYSPSLRCTALEACAHPFFDDLRDP 429 (492)
Q Consensus 368 ~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~Li~~~L~~dP~~R~t~~e~l~Hp~f~~~~~~ 429 (492)
+ .++..+++++.+||.+||+.||.+||++.++++||||...+..
T Consensus 228 ---------~---------~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~l~~~~~~~~~~~~ 271 (286)
T cd06622 228 ---------P---------TLPSGYSDDAQDFVAKCLNKIPNRRPTYAQLLEHPWLVKYKNA 271 (286)
T ss_pred ---------C---------CCCcccCHHHHHHHHHHcccCcccCCCHHHHhcChhhhhccCC
Confidence 0 1223478999999999999999999999999999999987654
No 167
>cd05574 STKc_phototropin_like Catalytic domain of Phototropin-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Phototropin-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The phototropin-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Included in this subfamily are plant phototropins and predominantly uncharacterized fungal STKs whose catalytic domains resemble the phototropin kinase domain. One protein from Neurospora crassa is called nrc-2. Phototropins are blue-light receptors that control responses such as phototropism, stromatal opening, and chloroplast movement in order to optimize the photosynthetic efficiency of plants. They are light-activated STKs that contain an N-termin
Probab=100.00 E-value=6.8e-42 Score=340.35 Aligned_cols=259 Identities=29% Similarity=0.502 Sum_probs=208.7
Q ss_pred ceeEeeeeccCCceEEEEEEEcCCCCEEEEEEeccch-------hhHHHHHHHHHHcCCCCccccceeeeeccCCCceEE
Q 011138 138 SYMAERVVGTGSFGVVFQAKCLETGDSVAIKKVLQDK-------RYKNRELQIMRLLNHPNVVSLKHCFFSTTEKDELYL 210 (492)
Q Consensus 138 ~y~~~~~lG~G~fg~Vy~~~~~~~g~~vAiK~~~~~~-------~~~~~E~~il~~l~h~nIv~l~~~~~~~~~~~~~~~ 210 (492)
+|.+.+.||+|+||.||+|.+..+++.||||.+.... ....+|+++++.++|+||+++++++ .+..+.
T Consensus 2 ~y~~~~~ig~g~~g~vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~-----~~~~~~ 76 (316)
T cd05574 2 HFKKIKLLGKGDVGRVFLVRLKGTGKLFALKVLDKKEMIKRNKVKRVLTEQEILATLDHPFLPTLYASF-----QTETYL 76 (316)
T ss_pred ceEEeeeecCCccEEEEEEEEcCCCcEEEEEEEeccccchHHHHHHHHHHHHHHHhCCCCCchhheeee-----ecCCEE
Confidence 5899999999999999999999999999999885432 2345799999999999999999988 445578
Q ss_pred EEEeeechhh-HHHHhhhhhhcCCCcCHHHHHHHHHHHHHHHHHHHhhCCcccCCCCCCceEEcCCCCcEEEeeecCccc
Q 011138 211 NLVLEYISET-VYRVSKHYTRMNQHVPILYVQLYTYQICRALNYLHHVVGVCHRDIKPQNLLVNPHTHQLKICDFGSAKM 289 (492)
Q Consensus 211 ~lV~E~~~~~-l~~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~yLH~~~givHrDlKp~NILl~~~~~~vkL~DFG~a~~ 289 (492)
|+||||+.++ +.+++. ......+++..++.++.||+.||.|||+ .||+||||||+||+++.++ .++|+|||++..
T Consensus 77 ~lv~e~~~~~~L~~~~~--~~~~~~l~~~~~~~~~~qi~~~l~~lH~-~~i~H~dlkp~Nili~~~~-~~~l~dfg~~~~ 152 (316)
T cd05574 77 CLVMDYCPGGELFRLLQ--RQPGKCLSEEVARFYAAEVLLALEYLHL-LGIVYRDLKPENILLHESG-HIMLSDFDLSKQ 152 (316)
T ss_pred EEEEEecCCCCHHHHHH--hCCCCccCHHHHHHHHHHHHHHHHHHHH-CCeeccCCChHHeEEcCCC-CEEEeecchhhc
Confidence 9999999864 444332 2224568999999999999999999997 9999999999999999887 799999999865
Q ss_pred cCCCCC------------------------------CccceeccCccCchhhcCCCCCCcchhhHHHHHHHHHHHhCCCC
Q 011138 290 LVPGEP------------------------------NISYICSRYYRAPELIFGATEYTTAIDMWSIGCVLAELLLGQPL 339 (492)
Q Consensus 290 ~~~~~~------------------------------~~~~~gt~~y~aPE~~~~~~~~~~~~DvwSlGvil~ell~G~~p 339 (492)
...... .....||..|+|||++.+. .++.++|||||||++|+|++|..|
T Consensus 153 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~-~~~~~~Di~slG~ll~~l~~g~~p 231 (316)
T cd05574 153 SDVEPPPVSKALRKGSRRSSVNSIPSETFSEEPSFRSNSFVGTEEYIAPEVISGD-GHGSAVDWWTLGILLYEMLYGTTP 231 (316)
T ss_pred ccccccccccccccccccccccccchhhhcccccCCCCCCcCccCCcCHHHHcCC-CCCchHHHHHHHHHHHHHhhCCCC
Confidence 422111 1134688999999999655 479999999999999999999999
Q ss_pred CCCCChHHHHHHHHHHhCCCCHHHHhhcCCCCcccCCCcccCCCcccccCCCCChhHhhhhccccccCCCCcCC----HH
Q 011138 340 FPGESGVDQLVEIIKILGTPTREEIKCMNPNYTEFKFPQIKAHPWHKIFHKRMPPEALDLVSRLLQYSPSLRCT----AL 415 (492)
Q Consensus 340 f~~~~~~~~~~~i~~~~g~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~Li~~~L~~dP~~R~t----~~ 415 (492)
|.+.+....+..+.. ....++. ...+++++++||.+||..||++||+ +.
T Consensus 232 f~~~~~~~~~~~~~~-----------------~~~~~~~----------~~~~~~~~~~li~~~l~~~p~~R~s~~~~~~ 284 (316)
T cd05574 232 FKGSNRDETFSNILK-----------------KEVTFPG----------SPPVSSSARDLIRKLLVKDPSKRLGSKRGAA 284 (316)
T ss_pred CCCCchHHHHHHHhc-----------------CCccCCC----------ccccCHHHHHHHHHHccCCHhHCCCchhhHH
Confidence 988877666555432 1111111 0126899999999999999999999 99
Q ss_pred HhhCCCCCCCCCCCCCCC
Q 011138 416 EACAHPFFDDLRDPNTCL 433 (492)
Q Consensus 416 e~l~Hp~f~~~~~~~~~~ 433 (492)
++++||||+....+.-..
T Consensus 285 ~ll~~~~~~~~~~~~~~~ 302 (316)
T cd05574 285 EIKQHPFFRGVNWALIRH 302 (316)
T ss_pred HHHcCchhhcCChhhccc
Confidence 999999999877654443
No 168
>KOG4279 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=1.5e-43 Score=356.50 Aligned_cols=251 Identities=27% Similarity=0.446 Sum_probs=204.2
Q ss_pred eeccCCceEEEEEEEcCCCCEEEEEEeccc----hhhHHHHHHHHHHcCCCCccccceeeeeccCCCceEEEEEeeechh
Q 011138 144 VVGTGSFGVVFQAKCLETGDSVAIKKVLQD----KRYKNRELQIMRLLNHPNVVSLKHCFFSTTEKDELYLNLVLEYISE 219 (492)
Q Consensus 144 ~lG~G~fg~Vy~~~~~~~g~~vAiK~~~~~----~~~~~~E~~il~~l~h~nIv~l~~~~~~~~~~~~~~~~lV~E~~~~ 219 (492)
+||+|.||+||.|++..|...+|||-+... .+-+..|+.+.+.|+|.|||++++++ ....++-|.||-++|
T Consensus 582 VLGKGTYG~VYA~RD~~tqvrIaIKEIpekdsr~~QPLhEEIaLH~~LrHkNIVrYLGs~-----senGf~kIFMEqVPG 656 (1226)
T KOG4279|consen 582 VLGKGTYGTVYAARDMDTQVRIAIKEIPEKDSREVQPLHEEIALHSTLRHKNIVRYLGSV-----SENGFFKIFMEQVPG 656 (1226)
T ss_pred EeecCceeEEEeeccccceeEEEeeecccccchhhccHHHHHHHHHHHhhHhHHHHhhcc-----CCCCeEEEEeecCCC
Confidence 699999999999999999999999988432 23355899999999999999999997 555578899999998
Q ss_pred hHHHHhhhhhhcCCCcCHHHHHHHHHHHHHHHHHHHhhCCcccCCCCCCceEEcCCCCcEEEeeecCccccCCCCCCc-c
Q 011138 220 TVYRVSKHYTRMNQHVPILYVQLYTYQICRALNYLHHVVGVCHRDIKPQNLLVNPHTHQLKICDFGSAKMLVPGEPNI-S 298 (492)
Q Consensus 220 ~l~~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~yLH~~~givHrDlKp~NILl~~~~~~vkL~DFG~a~~~~~~~~~~-~ 298 (492)
+.+..+.......-+-.+....+|.+||+.||+|||+ ..|||||||-+||||+...+.+||+|||.++.+..-.+.+ +
T Consensus 657 GSLSsLLrskWGPlKDNEstm~fYtkQILeGLkYLHe-n~IVHRDIKGDNVLvNTySGvlKISDFGTsKRLAginP~TET 735 (1226)
T KOG4279|consen 657 GSLSSLLRSKWGPLKDNESTMNFYTKQILEGLKYLHE-NKIVHRDIKGDNVLVNTYSGVLKISDFGTSKRLAGINPCTET 735 (1226)
T ss_pred CcHHHHHHhccCCCccchhHHHHHHHHHHHHhhhhhh-cceeeccccCCcEEEeeccceEEecccccchhhccCCccccc
Confidence 7666554433322223678889999999999999998 8999999999999999888899999999999886555543 6
Q ss_pred ceeccCccCchhhc-CCCCCCcchhhHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCCHHHHhhcCCCCcccCCC
Q 011138 299 YICSRYYRAPELIF-GATEYTTAIDMWSIGCVLAELLLGQPLFPGESGVDQLVEIIKILGTPTREEIKCMNPNYTEFKFP 377 (492)
Q Consensus 299 ~~gt~~y~aPE~~~-~~~~~~~~~DvwSlGvil~ell~G~~pf~~~~~~~~~~~i~~~~g~p~~~~~~~~~~~~~~~~~~ 377 (492)
+.||..|||||+|. |...|+.++|||||||++.||.||++||..-.... +.++++ .
T Consensus 736 FTGTLQYMAPEvIDqG~RGYG~aADIWS~GCT~vEMATGrPPF~Elgspq--AAMFkV---------------------G 792 (1226)
T KOG4279|consen 736 FTGTLQYMAPEVIDQGPRGYGKAADIWSFGCTMVEMATGRPPFVELGSPQ--AAMFKV---------------------G 792 (1226)
T ss_pred cccchhhhChHhhccCCcCCCchhhhhhccceeEeeccCCCCeeecCChh--Hhhhhh---------------------c
Confidence 88999999999995 44569999999999999999999999996533211 111111 1
Q ss_pred cccCCCcccccCCCCChhHhhhhccccccCCCCcCCHHHhhCCCCCCCC
Q 011138 378 QIKAHPWHKIFHKRMPPEALDLVSRLLQYSPSLRCTALEACAHPFFDDL 426 (492)
Q Consensus 378 ~~~~~~~~~~~~~~~s~~~~~Li~~~L~~dP~~R~t~~e~l~Hp~f~~~ 426 (492)
.. ..+..++..++.+++.||.+|+..||.+||+|.++|..||++.-
T Consensus 793 my---KvHP~iPeelsaeak~FilrcFepd~~~R~sA~~LL~DpFlq~~ 838 (1226)
T KOG4279|consen 793 MY---KVHPPIPEELSAEAKNFILRCFEPDPCDRPSAKDLLQDPFLQHN 838 (1226)
T ss_pred ce---ecCCCCcHHHHHHHHHHHHHHcCCCcccCccHHHhccCcccccC
Confidence 11 11223456788999999999999999999999999999999865
No 169
>cd07830 STKc_MAK_like Catalytic domain of Male germ cell-Associated Kinase-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Male germ cell-Associated Kinase (MAK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of human MAK and MAK-related kinase (MRK), Saccharomyces cerevisiae Ime2p, Schizosaccharomyces pombe Mei4-dependent protein 3 (Mde3) and Pit1, Caenorhabditis elegans dyf-5, Arabidopsis thaliana MHK, and similar proteins. These proteins play important roles during meiosis. MAK is highly expressed in testicular cells specifically in the meiotic phase, but is not essential for spermatogenesis and fertili
Probab=100.00 E-value=5.6e-42 Score=335.08 Aligned_cols=275 Identities=38% Similarity=0.689 Sum_probs=221.5
Q ss_pred eeEeeeeccCCceEEEEEEEcCCCCEEEEEEeccch-----hhHHHHHHHHHHcC-CCCccccceeeeeccCCCceEEEE
Q 011138 139 YMAERVVGTGSFGVVFQAKCLETGDSVAIKKVLQDK-----RYKNRELQIMRLLN-HPNVVSLKHCFFSTTEKDELYLNL 212 (492)
Q Consensus 139 y~~~~~lG~G~fg~Vy~~~~~~~g~~vAiK~~~~~~-----~~~~~E~~il~~l~-h~nIv~l~~~~~~~~~~~~~~~~l 212 (492)
|.+.+.||+|+||.||+|.+..+++.|+||.+.... ....+|+..++.++ |+||+++++++. +....++
T Consensus 1 y~~~~~ig~g~~g~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~~~~h~~i~~~~~~~~-----~~~~~~l 75 (283)
T cd07830 1 YKVIKQLGDGTFGSVYLARNKETGELVAIKKMKKKFYSWEECMNLREVKSLRKLNEHPNIVKLKEVFR-----ENDELYF 75 (283)
T ss_pred CeeheeeccCCceEEEEEEECCCCcEEEEEEehhhccchhHHHHHHHHHHHHhccCCCCchhHHHHhh-----cCCcEEE
Confidence 678889999999999999999999999999875432 22346899999999 999999999984 3456889
Q ss_pred EeeechhhHHHHhhhhhhcCCCcCHHHHHHHHHHHHHHHHHHHhhCCcccCCCCCCceEEcCCCCcEEEeeecCccccCC
Q 011138 213 VLEYISETVYRVSKHYTRMNQHVPILYVQLYTYQICRALNYLHHVVGVCHRDIKPQNLLVNPHTHQLKICDFGSAKMLVP 292 (492)
Q Consensus 213 V~E~~~~~l~~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~yLH~~~givHrDlKp~NILl~~~~~~vkL~DFG~a~~~~~ 292 (492)
||||+.++++..+.... ...+++..+..++.||+.+|.|||+ +||+|+||+|+||+++.++ .++|+|||++.....
T Consensus 76 v~e~~~~~l~~~~~~~~--~~~~~~~~~~~~~~~l~~~l~~Lh~-~~i~H~dl~~~ni~i~~~~-~~~l~d~~~~~~~~~ 151 (283)
T cd07830 76 VFEYMEGNLYQLMKDRK--GKPFSESVIRSIIYQILQGLAHIHK-HGFFHRDLKPENLLVSGPE-VVKIADFGLAREIRS 151 (283)
T ss_pred EEecCCCCHHHHHHhcc--cccCCHHHHHHHHHHHHHHHHHHHH-CCcccCCCChhhEEEcCCC-CEEEeecccceeccC
Confidence 99999887776544321 3468899999999999999999997 9999999999999999877 799999999987655
Q ss_pred CCCCccceeccCccCchhhcCCCCCCcchhhHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCCHHHHhhcCCCC-
Q 011138 293 GEPNISYICSRYYRAPELIFGATEYTTAIDMWSIGCVLAELLLGQPLFPGESGVDQLVEIIKILGTPTREEIKCMNPNY- 371 (492)
Q Consensus 293 ~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DvwSlGvil~ell~G~~pf~~~~~~~~~~~i~~~~g~p~~~~~~~~~~~~- 371 (492)
........++..|+|||++.+...++.++|+|||||++|+|++|++||...+..+.+.++...++.|....+.......
T Consensus 152 ~~~~~~~~~~~~~~aPE~~~~~~~~~~~~Di~s~G~~l~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 231 (283)
T cd07830 152 RPPYTDYVSTRWYRAPEILLRSTSYSSPVDIWALGCIMAELYTLRPLFPGSSEIDQLYKICSVLGTPTKQDWPEGYKLAS 231 (283)
T ss_pred CCCcCCCCCcccccCceeeecCcCcCCccchhhHHHHHHHHHhCCCccCCCChHHHHHHHHHhcCCCChhhhhhHhhhhc
Confidence 4444556789999999998666668999999999999999999999999999999999999999988776554321111
Q ss_pred -cccCCCcccCCCcccccCCCCChhHhhhhccccccCCCCcCCHHHhhCCCCC
Q 011138 372 -TEFKFPQIKAHPWHKIFHKRMPPEALDLVSRLLQYSPSLRCTALEACAHPFF 423 (492)
Q Consensus 372 -~~~~~~~~~~~~~~~~~~~~~s~~~~~Li~~~L~~dP~~R~t~~e~l~Hp~f 423 (492)
....++......... +.+..+.++.+||++||+.||++|||+.|++.||||
T Consensus 232 ~~~~~~~~~~~~~~~~-~~~~~~~~~~~li~~cl~~~p~~Rpt~~ei~~~~~~ 283 (283)
T cd07830 232 KLGFRFPQFAPTSLHQ-LIPNASPEAIDLIKDMLRWDPKKRPTASQALQHPYF 283 (283)
T ss_pred cccccccccccccHHH-HcccCCHHHHHHHHHhcccCcccCCCHHHHhhCCCC
Confidence 111222221111111 122347899999999999999999999999999998
No 170
>cd06639 STKc_myosinIIIB Catalytic domain of the Protein Serine/Threonine Kinase, Class IIIB myosin. Serine/threonine kinases (STKs), class IIIB myosin subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins containing an N-terminal kinase catalytic domain and a C-terminal actin-binding domain. Class III myosins may play an important role in maintaining the structural integrity of photoreceptor cell microvilli. They may also function as cargo carriers during light-dependent translocation, in photoreceptor cells, of proteins such as transducin and arrestin. Class IIIB myosin is expressed highly in retina. It is also pre
Probab=100.00 E-value=9.9e-42 Score=335.08 Aligned_cols=261 Identities=25% Similarity=0.346 Sum_probs=206.9
Q ss_pred ccceeEeeeeccCCceEEEEEEEcCCCCEEEEEEeccc---hhhHHHHHHHHHHc-CCCCccccceeeeeccCCCceEEE
Q 011138 136 TISYMAERVVGTGSFGVVFQAKCLETGDSVAIKKVLQD---KRYKNRELQIMRLL-NHPNVVSLKHCFFSTTEKDELYLN 211 (492)
Q Consensus 136 ~~~y~~~~~lG~G~fg~Vy~~~~~~~g~~vAiK~~~~~---~~~~~~E~~il~~l-~h~nIv~l~~~~~~~~~~~~~~~~ 211 (492)
..+|.+.+.||+|+||.||+|.+..+++.+|+|.+... .....+|+.+++.+ +||||+++++++...........+
T Consensus 21 ~~~y~~~~~l~~g~~~~vy~~~~~~~~~~~aik~~~~~~~~~~~~~~e~~~l~~l~~h~ni~~~~~~~~~~~~~~~~~~~ 100 (291)
T cd06639 21 TDTWEIIETIGKGTYGKVYKVTNKKDGSLAAVKILDPISDVDEEIEAEYNILQSLPNHPNVVKFYGMFYKADKLVGGQLW 100 (291)
T ss_pred CCCeEEEEEeecCCCeEEEEEEECCCCCEEEEEEecccccHHHHHHHHHHHHHHhcCCCCeEEEEEEEEeccccCCCeeE
Confidence 45799999999999999999999999999999988543 23445799999998 799999999998765444445688
Q ss_pred EEeeechhh-HHHHhhhhhhcCCCcCHHHHHHHHHHHHHHHHHHHhhCCcccCCCCCCceEEcCCCCcEEEeeecCcccc
Q 011138 212 LVLEYISET-VYRVSKHYTRMNQHVPILYVQLYTYQICRALNYLHHVVGVCHRDIKPQNLLVNPHTHQLKICDFGSAKML 290 (492)
Q Consensus 212 lV~E~~~~~-l~~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~yLH~~~givHrDlKp~NILl~~~~~~vkL~DFG~a~~~ 290 (492)
+||||++++ +.+.+.........+++..++.++.||+.||.|||+ +||+||||||+||+++.++ .+||+|||++...
T Consensus 101 lv~ey~~~~sL~~~~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~-~~ivH~dlkp~nili~~~~-~~kl~dfg~~~~~ 178 (291)
T cd06639 101 LVLELCNGGSVTELVKGLLICGQRLDEAMISYILYGALLGLQHLHN-NRIIHRDVKGNNILLTTEG-GVKLVDFGVSAQL 178 (291)
T ss_pred EEEEECCCCcHHHHHHHhhhcCCCCCHHHHHHHHHHHHHHHHHHHh-CCeeccCCCHHHEEEcCCC-CEEEeecccchhc
Confidence 999999864 444444333345678999999999999999999997 9999999999999999887 7999999998765
Q ss_pred CCCC-CCccceeccCccCchhhcCCC----CCCcchhhHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCCHHHHh
Q 011138 291 VPGE-PNISYICSRYYRAPELIFGAT----EYTTAIDMWSIGCVLAELLLGQPLFPGESGVDQLVEIIKILGTPTREEIK 365 (492)
Q Consensus 291 ~~~~-~~~~~~gt~~y~aPE~~~~~~----~~~~~~DvwSlGvil~ell~G~~pf~~~~~~~~~~~i~~~~g~p~~~~~~ 365 (492)
.... ......|+..|+|||++.... .++.++|||||||++|+|++|++||........+..+.+. +.
T Consensus 179 ~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Di~slGvi~~el~~g~~p~~~~~~~~~~~~~~~~---~~----- 250 (291)
T cd06639 179 TSTRLRRNTSVGTPFWMAPEVIACEQQYDYSYDARCDVWSLGITAIELGDGDPPLFDMHPVKTLFKIPRN---PP----- 250 (291)
T ss_pred ccccccccCccCCccccChhhhcCCCCcccccCCccchHHHHHHHHHHhhCCCCCCCCcHHHHHHHHhcC---CC-----
Confidence 4322 223456889999999985432 2678999999999999999999999877655554443220 00
Q ss_pred hcCCCCcccCCCcccCCCcccccCCCCChhHhhhhccccccCCCCcCCHHHhhCCCCCC
Q 011138 366 CMNPNYTEFKFPQIKAHPWHKIFHKRMPPEALDLVSRLLQYSPSLRCTALEACAHPFFD 424 (492)
Q Consensus 366 ~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~Li~~~L~~dP~~R~t~~e~l~Hp~f~ 424 (492)
..+ ......+.++.+||.+||+.||++||++.++++||||+
T Consensus 251 --------~~~----------~~~~~~~~~l~~li~~~l~~~p~~Rps~~~il~~~~~~ 291 (291)
T cd06639 251 --------PTL----------LHPEKWCRSFNHFISQCLIKDFEARPSVTHLLEHPFIK 291 (291)
T ss_pred --------CCC----------CcccccCHHHHHHHHHHhhcChhhCcCHHHHhcCcccC
Confidence 000 01124577899999999999999999999999999995
No 171
>cd07840 STKc_CDK9_like Catalytic domain of Cyclin-Dependent protein Kinase 9-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 9 (CDK9)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK9-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK9 and CDK12 from higher eukaryotes, yeast BUR1, C-type plant CDKs (CdkC), and similar proteins. CDK9, BUR1, and CdkC are functionally equivalent. They act as a kinase for the C-terminal domain of RNA po
Probab=100.00 E-value=4.1e-42 Score=336.19 Aligned_cols=277 Identities=33% Similarity=0.602 Sum_probs=218.7
Q ss_pred eeEeeeeccCCceEEEEEEEcCCCCEEEEEEeccch------hhHHHHHHHHHHcCCCCccccceeeeeccCCCceEEEE
Q 011138 139 YMAERVVGTGSFGVVFQAKCLETGDSVAIKKVLQDK------RYKNRELQIMRLLNHPNVVSLKHCFFSTTEKDELYLNL 212 (492)
Q Consensus 139 y~~~~~lG~G~fg~Vy~~~~~~~g~~vAiK~~~~~~------~~~~~E~~il~~l~h~nIv~l~~~~~~~~~~~~~~~~l 212 (492)
|.+.+.||.|+||.||+|.+..+|+.+|+|.+.... ....+|+.+++.++|+||+++++++.... ....++
T Consensus 1 y~~~~~l~~g~~~~vy~~~~~~~~~~~~~K~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~---~~~~~l 77 (287)
T cd07840 1 YEKIAQIGEGTYGQVYKARNKKTGELVALKKIRMENEKEGFPITAIREIKLLQKLRHPNIVRLKEIVTSKG---KGSIYM 77 (287)
T ss_pred CeeeEEeccCCCeEEEEEEECCCCeEEEEEEEecccccccchHHHHHHHHHHHhccCCCeeeheeeEecCC---CCcEEE
Confidence 678899999999999999999999999999986542 23457999999999999999999884321 256899
Q ss_pred EeeechhhHHHHhhhhhhcCCCcCHHHHHHHHHHHHHHHHHHHhhCCcccCCCCCCceEEcCCCCcEEEeeecCccccCC
Q 011138 213 VLEYISETVYRVSKHYTRMNQHVPILYVQLYTYQICRALNYLHHVVGVCHRDIKPQNLLVNPHTHQLKICDFGSAKMLVP 292 (492)
Q Consensus 213 V~E~~~~~l~~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~yLH~~~givHrDlKp~NILl~~~~~~vkL~DFG~a~~~~~ 292 (492)
||||+++++...+.. ....+++..+..++.||+.||+|||+ .|++|+||||+||+++.++ .+||+|||++.....
T Consensus 78 v~e~~~~~l~~~~~~---~~~~~~~~~~~~i~~~i~~al~~LH~-~~~~h~dl~p~nil~~~~~-~~~l~d~g~~~~~~~ 152 (287)
T cd07840 78 VFEYMDHDLTGLLDS---PEVKFTESQIKCYMKQLLEGLQYLHS-NGILHRDIKGSNILINNDG-VLKLADFGLARPYTK 152 (287)
T ss_pred EeccccccHHHHHhc---cCCCCCHHHHHHHHHHHHHHHHHHHH-CCceeccCcHHHeEEcCCC-CEEEccccceeeccC
Confidence 999999876665433 22468899999999999999999997 8999999999999999887 799999999986643
Q ss_pred CC--CCccceeccCccCchhhcCCCCCCcchhhHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCCHHHHhhcCCC
Q 011138 293 GE--PNISYICSRYYRAPELIFGATEYTTAIDMWSIGCVLAELLLGQPLFPGESGVDQLVEIIKILGTPTREEIKCMNPN 370 (492)
Q Consensus 293 ~~--~~~~~~gt~~y~aPE~~~~~~~~~~~~DvwSlGvil~ell~G~~pf~~~~~~~~~~~i~~~~g~p~~~~~~~~~~~ 370 (492)
.. ......++..|+|||.+.+...++.++|||||||++|+|++|..||...+....+..+....+.+....+......
T Consensus 153 ~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~~Dv~slG~~l~el~t~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 232 (287)
T cd07840 153 RNSADYTNRVITLWYRPPELLLGATRYGPEVDMWSVGCILAELFLGKPIFQGSTELEQLEKIFELCGSPTDENWPGVSKL 232 (287)
T ss_pred CCcccccccccccccCCceeeEccccCChHHHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCchhhccccccc
Confidence 32 1233466889999998876666899999999999999999999999999888888888888888876655432211
Q ss_pred --CcccCCCcccCCCcccccCCCCChhHhhhhccccccCCCCcCCHHHhhCCCCC
Q 011138 371 --YTEFKFPQIKAHPWHKIFHKRMPPEALDLVSRLLQYSPSLRCTALEACAHPFF 423 (492)
Q Consensus 371 --~~~~~~~~~~~~~~~~~~~~~~s~~~~~Li~~~L~~dP~~R~t~~e~l~Hp~f 423 (492)
+................+...+++++.++|.+||..||.+||++.+++.||||
T Consensus 233 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~P~~Rp~~~~~l~~~~~ 287 (287)
T cd07840 233 PWFENLKPKKPYKRRLREFFKHLIDPSALDLLDKLLTLDPKKRISADQALQHEYF 287 (287)
T ss_pred hhhhhccccccchhHHHHHhcccCCHHHHHHHHHHcCCChhhCcCHHHHhhCcCC
Confidence 00000000000001111222248999999999999999999999999999998
No 172
>cd08227 PK_STRAD_alpha Pseudokinase domain of STE20-related kinase adapter protein alpha. Protein Kinase family, STE20-related kinase adapter protein (STRAD) alpha subfamily, pseudokinase domain. The STRAD alpha subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hype
Probab=100.00 E-value=2.5e-42 Score=345.31 Aligned_cols=275 Identities=22% Similarity=0.370 Sum_probs=198.1
Q ss_pred EeeeeccC--CceEEEEEEEcCCCCEEEEEEeccc------hhhHHHHHHHHHHcCCCCccccceeeeeccCCCceEEEE
Q 011138 141 AERVVGTG--SFGVVFQAKCLETGDSVAIKKVLQD------KRYKNRELQIMRLLNHPNVVSLKHCFFSTTEKDELYLNL 212 (492)
Q Consensus 141 ~~~~lG~G--~fg~Vy~~~~~~~g~~vAiK~~~~~------~~~~~~E~~il~~l~h~nIv~l~~~~~~~~~~~~~~~~l 212 (492)
+.++||+| +||+||++.+..+|+.||+|++... .....+|+.+++.++||||++++++|. ...++|+
T Consensus 2 ~~~~ig~G~~~~~~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~l~~l~hpniv~~~~~~~-----~~~~~~l 76 (327)
T cd08227 2 LLTVIGRGFEDLMTVNLARYKPTGEYVTVRRINLEACTNEMVTFLQGELHVSKLFNHPNIVPYRATFI-----ADNELWV 76 (327)
T ss_pred hhhhccccccceEEEEEEeecccCcEEEEEEechhhccHHHHHHHHHHHHHHHhcCCCCeeeEEEEEE-----ECCEEEE
Confidence 45679999 7899999999999999999998543 134567999999999999999999884 3346899
Q ss_pred Eeeechhh-HHHHhhhhhhcCCCcCHHHHHHHHHHHHHHHHHHHhhCCcccCCCCCCceEEcCCCCcEEEeeecCccccC
Q 011138 213 VLEYISET-VYRVSKHYTRMNQHVPILYVQLYTYQICRALNYLHHVVGVCHRDIKPQNLLVNPHTHQLKICDFGSAKMLV 291 (492)
Q Consensus 213 V~E~~~~~-l~~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~yLH~~~givHrDlKp~NILl~~~~~~vkL~DFG~a~~~~ 291 (492)
||||++++ +.+++... ....+++..++.++.||+.||.|||+ +||+||||||+|||++.++ .++++|||.+....
T Consensus 77 v~e~~~~~~l~~~~~~~--~~~~l~~~~~~~i~~qi~~~L~~LH~-~~iiH~dlkp~Nil~~~~~-~~~l~~~~~~~~~~ 152 (327)
T cd08227 77 VTSFMAYGSAKDLICTH--FMDGMSELAIAYILQGVLKALDYIHH-MGYVHRSVKASHILISVDG-KVYLSGLRSNLSMI 152 (327)
T ss_pred EEeccCCCcHHHHHHhh--ccCCCCHHHHHHHHHHHHHHHHHHHH-CCEecCCCChhhEEEecCC-cEEEcccchhhccc
Confidence 99999865 44443221 23458889999999999999999997 9999999999999999887 79999998754332
Q ss_pred CCCC--------CccceeccCccCchhhcCC-CCCCcchhhHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCC--
Q 011138 292 PGEP--------NISYICSRYYRAPELIFGA-TEYTTAIDMWSIGCVLAELLLGQPLFPGESGVDQLVEIIKILGTPT-- 360 (492)
Q Consensus 292 ~~~~--------~~~~~gt~~y~aPE~~~~~-~~~~~~~DvwSlGvil~ell~G~~pf~~~~~~~~~~~i~~~~g~p~-- 360 (492)
.... .....++..|+|||++.+. ..++.++|||||||++|+|++|..||.............. +..+
T Consensus 153 ~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~~~~--~~~~~~ 230 (327)
T cd08227 153 NHGQRLRVVHDFPKYSVKVLPWLSPEVLQQNLQGYDAKSDIYSVGITACELANGHVPFKDMPATQMLLEKLN--GTVPCL 230 (327)
T ss_pred cccccccccccccccccceecccChHHhhcccCCCCchhhHHHHHHHHHHHHHCCCCCCCcchhHHHHHHhc--CCcccc
Confidence 1111 1123567789999999653 3589999999999999999999999987654443333221 1111
Q ss_pred -------HHHHhhcCCC-------CcccCC----CcccCCCcccccCCCCChhHhhhhccccccCCCCcCCHHHhhCCCC
Q 011138 361 -------REEIKCMNPN-------YTEFKF----PQIKAHPWHKIFHKRMPPEALDLVSRLLQYSPSLRCTALEACAHPF 422 (492)
Q Consensus 361 -------~~~~~~~~~~-------~~~~~~----~~~~~~~~~~~~~~~~s~~~~~Li~~~L~~dP~~R~t~~e~l~Hp~ 422 (492)
.+.+. +.+. +..... ...........+...+++++.+||.+||+.||++|||++++++|||
T Consensus 231 ~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~Rpt~~ell~~p~ 309 (327)
T cd08227 231 LDTTTIPAEELT-MKPSRSGANSGLGESTTVSTPRPSNGESSSHPYNRTFSPHFHHFVEQCLQRNPDARPSASTLLNHSF 309 (327)
T ss_pred ccccchhhhhcc-cCCcccCCcCCCCcccccCCcCccccCCcccccccccCHHHHHHHHHHHhhCchhcCCHHHHhcChh
Confidence 01000 0000 000000 0000000011123456789999999999999999999999999999
Q ss_pred CCCCC
Q 011138 423 FDDLR 427 (492)
Q Consensus 423 f~~~~ 427 (492)
|+++.
T Consensus 310 f~~~~ 314 (327)
T cd08227 310 FKQIK 314 (327)
T ss_pred hhhcc
Confidence 98764
No 173
>cd07877 STKc_p38alpha_MAPK14 Catalytic domain of the Serine/Threonine Kinase, p38alpha Mitogen-Activated Protein Kinase. Serine/Threonine Kinases (STKs), p38alpha subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38alpha subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38alpha, also called MAPK14
Probab=100.00 E-value=7.4e-42 Score=344.53 Aligned_cols=285 Identities=34% Similarity=0.578 Sum_probs=224.0
Q ss_pred cceeEeeeeccCCceEEEEEEEcCCCCEEEEEEeccch------hhHHHHHHHHHHcCCCCccccceeeeeccC-CCceE
Q 011138 137 ISYMAERVVGTGSFGVVFQAKCLETGDSVAIKKVLQDK------RYKNRELQIMRLLNHPNVVSLKHCFFSTTE-KDELY 209 (492)
Q Consensus 137 ~~y~~~~~lG~G~fg~Vy~~~~~~~g~~vAiK~~~~~~------~~~~~E~~il~~l~h~nIv~l~~~~~~~~~-~~~~~ 209 (492)
.+|.+.+.||+|+||.||+|.+..+|+.||+|++.... ....+|+.+++.++||||+++++++..... .....
T Consensus 17 ~~y~~~~~lg~G~~g~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~Ei~~l~~l~h~~iv~~~~~~~~~~~~~~~~~ 96 (345)
T cd07877 17 ERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFND 96 (345)
T ss_pred CceEEEEEeeecCCeEEEEEEEcCCCeEEEEEEecCcchhhHHHHHHHHHHHHHHHcCCCcccceeeeeeeccccccccc
Confidence 46999999999999999999999999999999885421 234579999999999999999998754322 22335
Q ss_pred EEEEeeechhhHHHHhhhhhhcCCCcCHHHHHHHHHHHHHHHHHHHhhCCcccCCCCCCceEEcCCCCcEEEeeecCccc
Q 011138 210 LNLVLEYISETVYRVSKHYTRMNQHVPILYVQLYTYQICRALNYLHHVVGVCHRDIKPQNLLVNPHTHQLKICDFGSAKM 289 (492)
Q Consensus 210 ~~lV~E~~~~~l~~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~yLH~~~givHrDlKp~NILl~~~~~~vkL~DFG~a~~ 289 (492)
+|++++++++.+..... ...+++..++.++.||+.||.|||+ +||+||||||+||+++.++ .+||+|||++..
T Consensus 97 ~~lv~~~~~~~L~~~~~-----~~~l~~~~~~~i~~qi~~aL~~LH~-~~ivH~dlkp~NIll~~~~-~~kl~dfg~~~~ 169 (345)
T cd07877 97 VYLVTHLMGADLNNIVK-----CQKLTDDHVQFLIYQILRGLKYIHS-ADIIHRDLKPSNLAVNEDC-ELKILDFGLARH 169 (345)
T ss_pred EEEEehhcccCHHHHHh-----cCCCCHHHHHHHHHHHHHHHHHHHH-CCeeecCCChHHEEEcCCC-CEEEeccccccc
Confidence 78999999777655433 2458889999999999999999997 9999999999999999887 799999999875
Q ss_pred cCCCCCCccceeccCccCchhhcCCCCCCcchhhHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCCHHHHhhcCC
Q 011138 290 LVPGEPNISYICSRYYRAPELIFGATEYTTAIDMWSIGCVLAELLLGQPLFPGESGVDQLVEIIKILGTPTREEIKCMNP 369 (492)
Q Consensus 290 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DvwSlGvil~ell~G~~pf~~~~~~~~~~~i~~~~g~p~~~~~~~~~~ 369 (492)
.. .......++..|+|||++.+...++.++|||||||++|+|++|++||.+.+....+..+....+.+..........
T Consensus 170 ~~--~~~~~~~~~~~y~aPE~~~~~~~~~~~~DvwslG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 247 (345)
T cd07877 170 TD--DEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISS 247 (345)
T ss_pred cc--ccccccccCCCccCHHHHhCccCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCCHHHHhhccc
Confidence 42 2334567899999999987656688999999999999999999999998888888888888888777665543322
Q ss_pred CCccc---CCCcccCCCcccccCCCCChhHhhhhccccccCCCCcCCHHHhhCCCCCCCCCCCCC
Q 011138 370 NYTEF---KFPQIKAHPWHKIFHKRMPPEALDLVSRLLQYSPSLRCTALEACAHPFFDDLRDPNT 431 (492)
Q Consensus 370 ~~~~~---~~~~~~~~~~~~~~~~~~s~~~~~Li~~~L~~dP~~R~t~~e~l~Hp~f~~~~~~~~ 431 (492)
..... ..+......+.. .....++++++||.+||+.||.+|+++.++++||||+++..+..
T Consensus 248 ~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~li~~~L~~dp~~R~t~~e~l~h~~f~~~~~~~~ 311 (345)
T cd07877 248 ESARNYIQSLTQMPKMNFAN-VFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQYHDPDD 311 (345)
T ss_pred HhHHHHHHHhcccCCcchhh-hcCCCCHHHHHHHHHHcCCChhhcCCHHHHhcChhhhhcCCCCc
Confidence 11000 001111111111 11246889999999999999999999999999999998776543
No 174
>cd07851 STKc_p38 Catalytic domain of the Serine/Threonine Kinase, p38 Mitogen-Activated Protein Kinase. Serine/Threonine Kinases (STKs), p38 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They function in the regulation of the cell cycle, cell development, cell differentiation, senescence, tumorigenesis, apoptosis, pain development and pain progression, and immune responses. p38 kinases are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK
Probab=100.00 E-value=5.8e-42 Score=345.04 Aligned_cols=284 Identities=35% Similarity=0.636 Sum_probs=224.9
Q ss_pred cceeEeeeeccCCceEEEEEEEcCCCCEEEEEEeccc------hhhHHHHHHHHHHcCCCCccccceeeeeccC-CCceE
Q 011138 137 ISYMAERVVGTGSFGVVFQAKCLETGDSVAIKKVLQD------KRYKNRELQIMRLLNHPNVVSLKHCFFSTTE-KDELY 209 (492)
Q Consensus 137 ~~y~~~~~lG~G~fg~Vy~~~~~~~g~~vAiK~~~~~------~~~~~~E~~il~~l~h~nIv~l~~~~~~~~~-~~~~~ 209 (492)
.+|.+.+.||+|+||.||+|++..+++.||||++... .....+|+.+++.++||||+++++++..... .....
T Consensus 15 ~~y~~~~~ig~g~~g~vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~ 94 (343)
T cd07851 15 DRYQNLSPVGSGAYGQVCSAFDTKTGRKVAIKKLSRPFQSAIHAKRTYRELRLLKHMDHENVIGLLDVFTPASSLEDFQD 94 (343)
T ss_pred CceEEEEEeccCCceEEEEEEECCCCcEEEEEecccccchhhHHHHHHHHHHHHHhccCCCHHHHHHHhhcccccccccc
Confidence 4699999999999999999999999999999987532 1233469999999999999999988744332 22335
Q ss_pred EEEEeeechhhHHHHhhhhhhcCCCcCHHHHHHHHHHHHHHHHHHHhhCCcccCCCCCCceEEcCCCCcEEEeeecCccc
Q 011138 210 LNLVLEYISETVYRVSKHYTRMNQHVPILYVQLYTYQICRALNYLHHVVGVCHRDIKPQNLLVNPHTHQLKICDFGSAKM 289 (492)
Q Consensus 210 ~~lV~E~~~~~l~~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~yLH~~~givHrDlKp~NILl~~~~~~vkL~DFG~a~~ 289 (492)
+++|+||+++++.+++.. ..+++..+..++.||+.||.|||+ .||+||||||+||+++.++ .+||+|||++..
T Consensus 95 ~~lv~e~~~~~L~~~~~~-----~~l~~~~~~~~~~ql~~aL~~LH~-~gi~H~dlkp~Nill~~~~-~~kL~dfg~~~~ 167 (343)
T cd07851 95 VYLVTHLMGADLNNIVKC-----QKLSDDHIQFLVYQILRGLKYIHS-AGIIHRDLKPSNIAVNEDC-ELKILDFGLARH 167 (343)
T ss_pred EEEEEecCCCCHHHHHhc-----CCCCHHHHHHHHHHHHHHHHHHHH-CCeecCCCCHHHeEECCCC-CEEEcccccccc
Confidence 889999998877665442 468999999999999999999997 8999999999999999877 799999999976
Q ss_pred cCCCCCCccceeccCccCchhhcCCCCCCcchhhHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCCHHHHhhcCC
Q 011138 290 LVPGEPNISYICSRYYRAPELIFGATEYTTAIDMWSIGCVLAELLLGQPLFPGESGVDQLVEIIKILGTPTREEIKCMNP 369 (492)
Q Consensus 290 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DvwSlGvil~ell~G~~pf~~~~~~~~~~~i~~~~g~p~~~~~~~~~~ 369 (492)
... ......++..|+|||++.+...++.++|||||||++|+|++|+.||.+.+..+.+..+....+.+++..+..+..
T Consensus 168 ~~~--~~~~~~~~~~y~aPE~~~~~~~~~~~~DvwslGv~l~elltg~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~ 245 (343)
T cd07851 168 TDD--EMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGKTLFPGSDHIDQLKRIMNLVGTPDEELLQKISS 245 (343)
T ss_pred ccc--cccCCcccccccCHHHHhCCCCCCchHhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHhcCCCCHHHHhhccc
Confidence 532 234557889999999987655688999999999999999999999999888888888888888877665443321
Q ss_pred CCcc---cCCCcccCCCcccccCCCCChhHhhhhccccccCCCCcCCHHHhhCCCCCCCCCCCC
Q 011138 370 NYTE---FKFPQIKAHPWHKIFHKRMPPEALDLVSRLLQYSPSLRCTALEACAHPFFDDLRDPN 430 (492)
Q Consensus 370 ~~~~---~~~~~~~~~~~~~~~~~~~s~~~~~Li~~~L~~dP~~R~t~~e~l~Hp~f~~~~~~~ 430 (492)
.... ...+......+... ...+++++.+||.+||..||.+|||+.++++||||++...+.
T Consensus 246 ~~~~~~~~~~~~~~~~~~~~~-~~~~s~~l~dli~~~l~~~P~~Rpt~~ell~h~~~~~~~~~~ 308 (343)
T cd07851 246 ESARNYIQSLPQMPKKDFKEV-FSGANPLAIDLLEKMLVLDPDKRITAAEALAHPYLAEYHDPE 308 (343)
T ss_pred hhHHHHHHhccccCCCCHHHH-hccCCHHHHHHHHHhCCCChhhCCCHHHHhcCCCccccCCCc
Confidence 1100 00111111111111 134689999999999999999999999999999999876543
No 175
>KOG0574 consensus STE20-like serine/threonine kinase MST [Signal transduction mechanisms]
Probab=100.00 E-value=8e-45 Score=334.83 Aligned_cols=254 Identities=28% Similarity=0.406 Sum_probs=207.1
Q ss_pred ceeEeeeeccCCceEEEEEEEcCCCCEEEEEEeccc--hhhHHHHHHHHHHcCCCCccccceeeeeccCCCceEEEEEee
Q 011138 138 SYMAERVVGTGSFGVVFQAKCLETGDSVAIKKVLQD--KRYKNRELQIMRLLNHPNVVSLKHCFFSTTEKDELYLNLVLE 215 (492)
Q Consensus 138 ~y~~~~~lG~G~fg~Vy~~~~~~~g~~vAiK~~~~~--~~~~~~E~~il~~l~h~nIv~l~~~~~~~~~~~~~~~~lV~E 215 (492)
.|.++.+||+|+||.||+|.++.+|+.+|||++..+ -+..-+|+.||++++.|++|++|+.|+...+ ++||||
T Consensus 34 VFDi~~KLGEGSYGSV~KAIH~EsG~v~AIK~VPV~sDLQEIIKEISIMQQC~S~yVVKYYGSYFK~sD-----LWIVME 108 (502)
T KOG0574|consen 34 VFDIVGKLGEGSYGSVHKAIHRESGHVLAIKKVPVDTDLQEIIKEISIMQQCKSKYVVKYYGSYFKHSD-----LWIVME 108 (502)
T ss_pred HHHHHHHhcCCcchHHHHHHHhccCcEEEEEecCccchHHHHHHHHHHHHHcCCchhhhhhhhhccCCc-----eEeehh
Confidence 377888999999999999999999999999998654 4455689999999999999999999976655 999999
Q ss_pred echhhHHHHhhhhhhcCCCcCHHHHHHHHHHHHHHHHHHHhhCCcccCCCCCCceEEcCCCCcEEEeeecCccccCCC-C
Q 011138 216 YISETVYRVSKHYTRMNQHVPILYVQLYTYQICRALNYLHHVVGVCHRDIKPQNLLVNPHTHQLKICDFGSAKMLVPG-E 294 (492)
Q Consensus 216 ~~~~~l~~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~yLH~~~givHrDlKp~NILl~~~~~~vkL~DFG~a~~~~~~-~ 294 (492)
||+.+....+.+ ..++.+.+.++..+++.-+.||+|||. ..-||||||..|||++.+| ..||+|||.|..+... .
T Consensus 109 YCGAGSiSDI~R--~R~K~L~E~EIs~iL~~TLKGL~YLH~-~~KIHRDIKAGNILLNT~G-~AKLADFGVAGQLTDTMA 184 (502)
T KOG0574|consen 109 YCGAGSISDIMR--ARRKPLSEQEISAVLRDTLKGLQYLHD-LKKIHRDIKAGNILLNTDG-IAKLADFGVAGQLTDTMA 184 (502)
T ss_pred hcCCCcHHHHHH--HhcCCccHHHHHHHHHHHHhHHHHHHH-HHHHHhhcccccEEEcccc-hhhhhhccccchhhhhHH
Confidence 999554433332 235789999999999999999999998 5778999999999999999 6999999999766332 3
Q ss_pred CCccceeccCccCchhhcCCCCCCcchhhHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCCHHHHhhcCCCCccc
Q 011138 295 PNISYICSRYYRAPELIFGATEYTTAIDMWSIGCVLAELLLGQPLFPGESGVDQLVEIIKILGTPTREEIKCMNPNYTEF 374 (492)
Q Consensus 295 ~~~~~~gt~~y~aPE~~~~~~~~~~~~DvwSlGvil~ell~G~~pf~~~~~~~~~~~i~~~~g~p~~~~~~~~~~~~~~~ 374 (492)
...+.+|||.|||||++..- .|+.++||||||++..||..|++||........+..| -..|++. +
T Consensus 185 KRNTVIGTPFWMAPEVI~EI-GY~~~ADIWSLGITaIEMAEG~PPYsDIHPMRAIFMI---PT~PPPT-----------F 249 (502)
T KOG0574|consen 185 KRNTVIGTPFWMAPEVIEEI-GYDTKADIWSLGITAIEMAEGRPPYSDIHPMRAIFMI---PTKPPPT-----------F 249 (502)
T ss_pred hhCccccCcccccHHHHHHh-ccchhhhHhhhcchhhhhhcCCCCcccccccceeEec---cCCCCCC-----------C
Confidence 45678999999999999654 4999999999999999999999999876543322211 1111110 1
Q ss_pred CCCcccCCCcccccCCCCChhHhhhhccccccCCCCcCCHHHhhCCCCCCCCC
Q 011138 375 KFPQIKAHPWHKIFHKRMPPEALDLVSRLLQYSPSLRCTALEACAHPFFDDLR 427 (492)
Q Consensus 375 ~~~~~~~~~~~~~~~~~~s~~~~~Li~~~L~~dP~~R~t~~e~l~Hp~f~~~~ 427 (492)
+- ++.-+.++.|||++||.++|++|.|+.++|+|||+++..
T Consensus 250 ~K------------PE~WS~~F~DFi~~CLiK~PE~R~TA~~L~~H~FiknA~ 290 (502)
T KOG0574|consen 250 KK------------PEEWSSEFNDFIRSCLIKKPEERKTALRLCEHTFIKNAP 290 (502)
T ss_pred CC------------hHhhhhHHHHHHHHHhcCCHHHHHHHHHHhhhhhhcCCC
Confidence 11 123478899999999999999999999999999998643
No 176
>cd07829 STKc_CDK_like Catalytic domain of Cyclin-Dependent protein Kinase-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase (CDK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKs are partly regulated by their subcellular localization, which defines substrate phosphorylation and the resulting specific function. CDK1, CDK2, CDK4, and CDK6 have well-defined functions in the cell cycle, such as the regulation of the
Probab=100.00 E-value=9.9e-42 Score=332.83 Aligned_cols=274 Identities=38% Similarity=0.679 Sum_probs=225.3
Q ss_pred eeEeeeeccCCceEEEEEEEcCCCCEEEEEEeccch------hhHHHHHHHHHHcCCCCccccceeeeeccCCCceEEEE
Q 011138 139 YMAERVVGTGSFGVVFQAKCLETGDSVAIKKVLQDK------RYKNRELQIMRLLNHPNVVSLKHCFFSTTEKDELYLNL 212 (492)
Q Consensus 139 y~~~~~lG~G~fg~Vy~~~~~~~g~~vAiK~~~~~~------~~~~~E~~il~~l~h~nIv~l~~~~~~~~~~~~~~~~l 212 (492)
|.+.+.||+|+||.||+|++..+++.||+|.+.... ....+|+.+++.++|+||+++++++. +..+.++
T Consensus 1 y~~~~~ig~g~~~~vy~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~-----~~~~~~~ 75 (282)
T cd07829 1 YEKLEKLGEGTYGVVYKARDKKTGEIVALKKIRLDNEEEGIPSTALREISLLKELKHPNIVKLLDVIH-----TERKLYL 75 (282)
T ss_pred CeeehcccccCcceEEEeeecCCCcEEEEEEeccccccccccHHHHHHHHHHHhcCCCCHHHHHhhhh-----cCCceEE
Confidence 567788999999999999999999999999886531 23457999999999999999999883 4456899
Q ss_pred EeeechhhHHHHhhhhhhcCCCcCHHHHHHHHHHHHHHHHHHHhhCCcccCCCCCCceEEcCCCCcEEEeeecCccccCC
Q 011138 213 VLEYISETVYRVSKHYTRMNQHVPILYVQLYTYQICRALNYLHHVVGVCHRDIKPQNLLVNPHTHQLKICDFGSAKMLVP 292 (492)
Q Consensus 213 V~E~~~~~l~~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~yLH~~~givHrDlKp~NILl~~~~~~vkL~DFG~a~~~~~ 292 (492)
||||+++++...+... ...+++..+..++.|++.||.|||+ +||+||||+|+||+++.++ .+||+|||++.....
T Consensus 76 v~e~~~~~l~~~i~~~---~~~~~~~~~~~~~~~i~~~l~~LH~-~~i~H~~l~~~ni~~~~~~-~~~l~d~g~~~~~~~ 150 (282)
T cd07829 76 VFEYCDMDLKKYLDKR---PGPLSPNLIKSIMYQLLRGLAYCHS-HRILHRDLKPQNILINRDG-VLKLADFGLARAFGI 150 (282)
T ss_pred EecCcCcCHHHHHHhh---ccCCCHHHHHHHHHHHHHHHHHHHH-CCcccCCCChheEEEcCCC-CEEEecCCcccccCC
Confidence 9999998776665432 1468899999999999999999997 9999999999999999877 799999999876543
Q ss_pred CC-CCccceeccCccCchhhcCCCCCCcchhhHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCCHHHHhhcCCC-
Q 011138 293 GE-PNISYICSRYYRAPELIFGATEYTTAIDMWSIGCVLAELLLGQPLFPGESGVDQLVEIIKILGTPTREEIKCMNPN- 370 (492)
Q Consensus 293 ~~-~~~~~~gt~~y~aPE~~~~~~~~~~~~DvwSlGvil~ell~G~~pf~~~~~~~~~~~i~~~~g~p~~~~~~~~~~~- 370 (492)
.. ......++..|+|||.+.+...++.++|||||||++|+|++|.+||.+.+..+.+..+...++.+....+..+...
T Consensus 151 ~~~~~~~~~~~~~~~aPE~~~~~~~~~~~~Dv~slG~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 230 (282)
T cd07829 151 PLRTYTHEVVTLWYRAPEILLGSKHYSTAVDIWSVGCIFAEMITGKPLFPGDSEIDQLFKIFQILGTPTEESWPGVTKLP 230 (282)
T ss_pred CccccCccccCcCcCChHHhcCCcCCCccccHHHHHHHHHHHHhCCCCCCCccHHHHHHHHHHHhCCCcHHHHHhhcccc
Confidence 32 2334556788999999876656899999999999999999999999999999999999999999988877654332
Q ss_pred CcccCCCcccCCCcccccCCCCChhHhhhhccccccCCCCcCCHHHhhCCCCC
Q 011138 371 YTEFKFPQIKAHPWHKIFHKRMPPEALDLVSRLLQYSPSLRCTALEACAHPFF 423 (492)
Q Consensus 371 ~~~~~~~~~~~~~~~~~~~~~~s~~~~~Li~~~L~~dP~~R~t~~e~l~Hp~f 423 (492)
+....++..........+ +.++.++.++|.+||..||++||++.++++||||
T Consensus 231 ~~~~~~~~~~~~~~~~~~-~~~~~~~~~~i~~~l~~~P~~Rp~~~~~l~~p~~ 282 (282)
T cd07829 231 DYKPTFPKFPPKDLEKVL-PRLDPEGIDLLSKMLQYNPAKRISAKEALKHPYF 282 (282)
T ss_pred cccccccccCccchHHhc-ccccHHHHHHHHHhhccCcccCCCHHHHhhCcCC
Confidence 123344444333333333 3458899999999999999999999999999998
No 177
>cd07880 STKc_p38gamma_MAPK12 Catalytic domain of the Serine/Threonine Kinase, p38gamma Mitogen-Activated Protein Kinase. Serine/Threonine Kinases (STKs), p38gamma subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38gamma subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38gamma, also called MAPK12
Probab=100.00 E-value=9.9e-42 Score=343.32 Aligned_cols=285 Identities=34% Similarity=0.640 Sum_probs=222.4
Q ss_pred ccceeEeeeeccCCceEEEEEEEcCCCCEEEEEEeccc------hhhHHHHHHHHHHcCCCCccccceeeeeccC-CCce
Q 011138 136 TISYMAERVVGTGSFGVVFQAKCLETGDSVAIKKVLQD------KRYKNRELQIMRLLNHPNVVSLKHCFFSTTE-KDEL 208 (492)
Q Consensus 136 ~~~y~~~~~lG~G~fg~Vy~~~~~~~g~~vAiK~~~~~------~~~~~~E~~il~~l~h~nIv~l~~~~~~~~~-~~~~ 208 (492)
..+|.+.+.||+|+||.||+|.+..+|..||||++... .....+|+.+++.++||||++++++|..... ....
T Consensus 14 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~ 93 (343)
T cd07880 14 PDRYRDLKQVGSGAYGTVCSALDRRTGAKVAIKKLYRPFQSELFAKRAYRELRLLKHMKHENVIGLLDVFTPDLSLDRFH 93 (343)
T ss_pred ccceEEEEEeeecCCeEEEEEEECCCCcEEEEEEecccccchHHHHHHHHHHHHHHhcCCCCccceeeeecCCccccccc
Confidence 34699999999999999999999999999999988432 1234579999999999999999998854332 1223
Q ss_pred EEEEEeeechhhHHHHhhhhhhcCCCcCHHHHHHHHHHHHHHHHHHHhhCCcccCCCCCCceEEcCCCCcEEEeeecCcc
Q 011138 209 YLNLVLEYISETVYRVSKHYTRMNQHVPILYVQLYTYQICRALNYLHHVVGVCHRDIKPQNLLVNPHTHQLKICDFGSAK 288 (492)
Q Consensus 209 ~~~lV~E~~~~~l~~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~yLH~~~givHrDlKp~NILl~~~~~~vkL~DFG~a~ 288 (492)
.+++||||+++++..... ...+++..++.++.||+.||.|||+ .||+||||||+||+++.++ .+||+|||++.
T Consensus 94 ~~~lv~e~~~~~l~~~~~-----~~~l~~~~~~~i~~qi~~al~~LH~-~gi~H~dlkp~Nill~~~~-~~kl~dfg~~~ 166 (343)
T cd07880 94 DFYLVMPFMGTDLGKLMK-----HEKLSEDRIQFLVYQMLKGLKYIHA-AGIIHRDLKPGNLAVNEDC-ELKILDFGLAR 166 (343)
T ss_pred eEEEEEecCCCCHHHHHh-----cCCCCHHHHHHHHHHHHHHHHHHHh-CCeecCCCCHHHEEEcCCC-CEEEeeccccc
Confidence 568999999776655433 2468899999999999999999997 9999999999999999877 79999999997
Q ss_pred ccCCCCCCccceeccCccCchhhcCCCCCCcchhhHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCCHHHHhhcC
Q 011138 289 MLVPGEPNISYICSRYYRAPELIFGATEYTTAIDMWSIGCVLAELLLGQPLFPGESGVDQLVEIIKILGTPTREEIKCMN 368 (492)
Q Consensus 289 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DvwSlGvil~ell~G~~pf~~~~~~~~~~~i~~~~g~p~~~~~~~~~ 368 (492)
.... ......+++.|+|||.+.+...++.++|+|||||++|+|++|.+||.+.+....+..+++..+.++........
T Consensus 167 ~~~~--~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~ll~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 244 (343)
T cd07880 167 QTDS--EMTGYVVTRWYRAPEVILNWMHYTQTVDIWSVGCIMAEMLTGKPLFKGHDHLDQLMEIMKVTGTPSKEFVQKLQ 244 (343)
T ss_pred cccc--CccccccCCcccCHHHHhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhcCCCCHHHHHhhc
Confidence 6532 23345778999999998765558899999999999999999999999988888888888877766654333221
Q ss_pred CCCcc---cCCCcccCCCcccccCCCCChhHhhhhccccccCCCCcCCHHHhhCCCCCCCCCCCC
Q 011138 369 PNYTE---FKFPQIKAHPWHKIFHKRMPPEALDLVSRLLQYSPSLRCTALEACAHPFFDDLRDPN 430 (492)
Q Consensus 369 ~~~~~---~~~~~~~~~~~~~~~~~~~s~~~~~Li~~~L~~dP~~R~t~~e~l~Hp~f~~~~~~~ 430 (492)
..... ..++......+ ..+.+.+++++.++|.+||+.||.+|||+.+++.||||+...+..
T Consensus 245 ~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~li~~~l~~dP~~R~t~~~~l~~~~~~~~~~~~ 308 (343)
T cd07880 245 SEDAKNYVKKLPRFRKKDF-RSLLPNANPLAVNVLEKMLVLDAESRITAAEALAHPYFEEFHDPE 308 (343)
T ss_pred chhHHHHHHhccccCcchH-HHhccCCChHHHHHHHHHcCCChhhCCCHHHHhcCccHhhhcCcc
Confidence 11000 01111111111 112356788999999999999999999999999999999887643
No 178
>cd05580 STKc_PKA Catalytic domain of the Protein Serine/Threonine Kinase, cAMP-dependent protein kinase. Serine/Threonine Kinases (STKs), cAMP-dependent protein kinase (PKA) subfamily, catalytic (c) subunit. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKA subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). This subfamily is composed of the cAMP-dependent proteins kinases, PKA and PRKX. The inactive PKA holoenzyme is a heterotetramer composed of two phosphorylated and active catalytic (C) subunits with a dimer of regulatory (R) subunits. Activation is achieved through the binding of the important second messenger cAMP to the R subunits, which leads to the dissociation of PKA into the R dimer and two active C subunits. PKA is present ubi
Probab=100.00 E-value=1.1e-41 Score=334.74 Aligned_cols=248 Identities=30% Similarity=0.516 Sum_probs=205.3
Q ss_pred ceeEeeeeccCCceEEEEEEEcCCCCEEEEEEeccch-------hhHHHHHHHHHHcCCCCccccceeeeeccCCCceEE
Q 011138 138 SYMAERVVGTGSFGVVFQAKCLETGDSVAIKKVLQDK-------RYKNRELQIMRLLNHPNVVSLKHCFFSTTEKDELYL 210 (492)
Q Consensus 138 ~y~~~~~lG~G~fg~Vy~~~~~~~g~~vAiK~~~~~~-------~~~~~E~~il~~l~h~nIv~l~~~~~~~~~~~~~~~ 210 (492)
+|.+.+.||+|+||.||++.+..+++.||+|.+.... ....+|+++++.++||||+++++++ .+..++
T Consensus 2 ~y~~~~~ig~g~~~~vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~-----~~~~~~ 76 (290)
T cd05580 2 DFEFIKTLGTGSFGRVMLVRHKGSGKYYALKILSKAKIVKLKQVEHVLNEKRILQSIRHPFLVNLYGSF-----QDDSNL 76 (290)
T ss_pred ceEEEEEeecCCCeEEEEEEEcCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCCCCccceeeEE-----EcCCeE
Confidence 5999999999999999999999999999999885422 2345799999999999999999988 444568
Q ss_pred EEEeeechh-hHHHHhhhhhhcCCCcCHHHHHHHHHHHHHHHHHHHhhCCcccCCCCCCceEEcCCCCcEEEeeecCccc
Q 011138 211 NLVLEYISE-TVYRVSKHYTRMNQHVPILYVQLYTYQICRALNYLHHVVGVCHRDIKPQNLLVNPHTHQLKICDFGSAKM 289 (492)
Q Consensus 211 ~lV~E~~~~-~l~~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~yLH~~~givHrDlKp~NILl~~~~~~vkL~DFG~a~~ 289 (492)
|+||||+.+ .+...+.. ...+++..+..++.||+.||.|||+ +||+||||+|.|||++.++ .+||+|||++..
T Consensus 77 ~~v~e~~~~~~L~~~~~~----~~~l~~~~~~~~~~qil~~l~~lH~-~~i~H~dl~p~nili~~~~-~~kl~dfg~~~~ 150 (290)
T cd05580 77 YLVMEYVPGGELFSHLRK----SGRFPEPVARFYAAQVVLALEYLHS-LDIVYRDLKPENLLLDSDG-YIKITDFGFAKR 150 (290)
T ss_pred EEEEecCCCCCHHHHHHH----cCCCCHHHHHHHHHHHHHHHHHHHH-CCEecCCCCHHHEEECCCC-CEEEeeCCCccc
Confidence 999999964 45444332 3568899999999999999999997 9999999999999999887 799999999987
Q ss_pred cCCCCCCccceeccCccCchhhcCCCCCCcchhhHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCCHHHHhhcCC
Q 011138 290 LVPGEPNISYICSRYYRAPELIFGATEYTTAIDMWSIGCVLAELLLGQPLFPGESGVDQLVEIIKILGTPTREEIKCMNP 369 (492)
Q Consensus 290 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DvwSlGvil~ell~G~~pf~~~~~~~~~~~i~~~~g~p~~~~~~~~~~ 369 (492)
.... .....+++.|+|||.+.+. .++.++|+|||||++|+|++|..||...+..+....+..
T Consensus 151 ~~~~--~~~~~~~~~y~aPE~~~~~-~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~--------------- 212 (290)
T cd05580 151 VKGR--TYTLCGTPEYLAPEIILSK-GYGKAVDWWALGILIYEMLAGYPPFFDDNPIQIYEKILE--------------- 212 (290)
T ss_pred cCCC--CCCCCCCccccChhhhcCC-CCCccccHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHhc---------------
Confidence 6443 3455789999999998654 478999999999999999999999988775444444332
Q ss_pred CCcccCCCcccCCCcccccCCCCChhHhhhhccccccCCCCcC-----CHHHhhCCCCCCCCCC
Q 011138 370 NYTEFKFPQIKAHPWHKIFHKRMPPEALDLVSRLLQYSPSLRC-----TALEACAHPFFDDLRD 428 (492)
Q Consensus 370 ~~~~~~~~~~~~~~~~~~~~~~~s~~~~~Li~~~L~~dP~~R~-----t~~e~l~Hp~f~~~~~ 428 (492)
.... ++..+++.++++|.+||+.||.+|+ ++.++++||||+.+..
T Consensus 213 --~~~~------------~~~~~~~~l~~li~~~l~~~p~~R~~~~~~~~~~l~~~~~~~~~~~ 262 (290)
T cd05580 213 --GKVR------------FPSFFSPDAKDLIRNLLQVDLTKRLGNLKNGVNDIKNHPWFAGIDW 262 (290)
T ss_pred --CCcc------------CCccCCHHHHHHHHHHccCCHHHccCcccCCHHHHHcCcccccCCH
Confidence 0111 2234688999999999999999999 9999999999998763
No 179
>cd07864 STKc_CDK12 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 12. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 12 (CDK12) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK12 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK12 is also called Cdc2-related protein kinase 7 (CRK7) or Cdc2-related kinase arginine/serine-rich (CrkRS). It is a unique CDK that contains an arginine/serine-rich (RS) domain, which is predominantly found in splicing factors. CDK12 is widely
Probab=100.00 E-value=1.5e-41 Score=335.27 Aligned_cols=282 Identities=33% Similarity=0.538 Sum_probs=220.8
Q ss_pred ccceeEeeeeccCCceEEEEEEEcCCCCEEEEEEeccch------hhHHHHHHHHHHcCCCCccccceeeeeccC-----
Q 011138 136 TISYMAERVVGTGSFGVVFQAKCLETGDSVAIKKVLQDK------RYKNRELQIMRLLNHPNVVSLKHCFFSTTE----- 204 (492)
Q Consensus 136 ~~~y~~~~~lG~G~fg~Vy~~~~~~~g~~vAiK~~~~~~------~~~~~E~~il~~l~h~nIv~l~~~~~~~~~----- 204 (492)
..+|.+.+.||+|+||.||+|.+..+|+.||||.+.... ....+|+.+++.++||||+++++++....+
T Consensus 6 ~~~~~~~~~lg~g~~g~v~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~~e~~~~~~l~h~~i~~~~~~~~~~~~~~~~~ 85 (302)
T cd07864 6 VDKFDIIGQIGEGTYGQVYKARDKDTGELVALKKVRLDNEKEGFPITAIREIKILRQLNHRNIVNLKEIVTDKQDALDFK 85 (302)
T ss_pred hhhhheeeeecccCCEEEEEEEECCCCcEEEEEEEeecccccCchHHHHHHHHHHHhCCCCCeeeeeheecCcchhhhcc
Confidence 346999999999999999999999999999999885321 234579999999999999999998754331
Q ss_pred CCceEEEEEeeechhhHHHHhhhhhhcCCCcCHHHHHHHHHHHHHHHHHHHhhCCcccCCCCCCceEEcCCCCcEEEeee
Q 011138 205 KDELYLNLVLEYISETVYRVSKHYTRMNQHVPILYVQLYTYQICRALNYLHHVVGVCHRDIKPQNLLVNPHTHQLKICDF 284 (492)
Q Consensus 205 ~~~~~~~lV~E~~~~~l~~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~yLH~~~givHrDlKp~NILl~~~~~~vkL~DF 284 (492)
.+..++++|+||+++++...+.. ....+++..+..++.||+.||.|||+ .||+||||||+||+++.++ .+||+||
T Consensus 86 ~~~~~~~lv~e~~~~~l~~~l~~---~~~~~~~~~~~~i~~qi~~aL~~LH~-~~i~H~dl~p~nili~~~~-~~kl~df 160 (302)
T cd07864 86 KDKGAFYLVFEYMDHDLMGLLES---GLVHFSEDHIKSFMKQLLEGLNYCHK-KNFLHRDIKCSNILLNNKG-QIKLADF 160 (302)
T ss_pred ccCCcEEEEEcccCccHHHHHhc---CCCCCCHHHHHHHHHHHHHHHHHHHh-CCeecCCCCHHHEEECCCC-cEEeCcc
Confidence 12337899999999877665432 23468899999999999999999997 8999999999999999887 7999999
Q ss_pred cCccccCCCC--CCccceeccCccCchhhcCCCCCCcchhhHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCCHH
Q 011138 285 GSAKMLVPGE--PNISYICSRYYRAPELIFGATEYTTAIDMWSIGCVLAELLLGQPLFPGESGVDQLVEIIKILGTPTRE 362 (492)
Q Consensus 285 G~a~~~~~~~--~~~~~~gt~~y~aPE~~~~~~~~~~~~DvwSlGvil~ell~G~~pf~~~~~~~~~~~i~~~~g~p~~~ 362 (492)
|++....... ......++..|+|||.+.+...++.++|||||||++|+|++|++||...+..+.+..+.+..+.+...
T Consensus 161 g~~~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~~Di~slG~~~~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~ 240 (302)
T cd07864 161 GLARLYNSEESRPYTNKVITLWYRPPELLLGEERYGPAIDVWSCGCILGELFTKKPIFQANQELAQLELISRLCGSPCPA 240 (302)
T ss_pred cccccccCCcccccccceeccCccChHHhcCCCCCCchhHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCChh
Confidence 9997654333 22234568889999998765567899999999999999999999999988888888888888887766
Q ss_pred HHhhcC--CCCcccCCCcccCCCcccccCCCCChhHhhhhccccccCCCCcCCHHHhhCCCCC
Q 011138 363 EIKCMN--PNYTEFKFPQIKAHPWHKIFHKRMPPEALDLVSRLLQYSPSLRCTALEACAHPFF 423 (492)
Q Consensus 363 ~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~Li~~~L~~dP~~R~t~~e~l~Hp~f 423 (492)
.++... +.+.......... .+.......++..+.+||.+||..||.+||++.+++.||||
T Consensus 241 ~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~li~~~l~~~P~~Rp~~~~il~~~~~ 302 (302)
T cd07864 241 VWPDVIKLPYFNTMKPKKQYR-RRLREEFSFIPTPALDLLDHMLTLDPSKRCTAEEALNSPWL 302 (302)
T ss_pred hcccccccccccccccccccc-cchhhhcCCCCHHHHHHHHHHccCChhhCCCHHHHhcCCCC
Confidence 554321 1111100000000 01111223578999999999999999999999999999997
No 180
>cd06637 STKc_TNIK Catalytic domain of the Protein Serine/Threonine Kinase, Traf2- and Nck-interacting kinase. Serine/threonine kinases (STKs), Traf2- and Nck-interacting kinase (TNIK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TNIK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to mitogen-activated protein kinase (MAPK), kinase kinase kinase 4 (MAP4K4), and MAP4K6. MAP4Ks participate in some MAPK signaling pathways by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). TNIK is an effector of Rap2, a small GTP-binding protein from the Ras family. TNIK specifically activ
Probab=100.00 E-value=7.8e-42 Score=332.10 Aligned_cols=256 Identities=25% Similarity=0.393 Sum_probs=201.2
Q ss_pred cceeEeeeeccCCceEEEEEEEcCCCCEEEEEEeccc---hhhHHHHHHHHHHc-CCCCccccceeeeeccCC-CceEEE
Q 011138 137 ISYMAERVVGTGSFGVVFQAKCLETGDSVAIKKVLQD---KRYKNRELQIMRLL-NHPNVVSLKHCFFSTTEK-DELYLN 211 (492)
Q Consensus 137 ~~y~~~~~lG~G~fg~Vy~~~~~~~g~~vAiK~~~~~---~~~~~~E~~il~~l-~h~nIv~l~~~~~~~~~~-~~~~~~ 211 (492)
..|.+.+.||+|+||.||+|.+..+++.||+|.+... .....+|+.+++.+ +|+||++++++|...... ....+|
T Consensus 6 ~~y~~~~~lg~g~~g~vy~~~~~~~~~~~aik~~~~~~~~~~~~~~e~~~l~~~~~h~~i~~~~~~~~~~~~~~~~~~~~ 85 (272)
T cd06637 6 GIFELVELVGNGTYGQVYKGRHVKTGQLAAIKVMDVTGDEEEEIKQEINMLKKYSHHRNIATYYGAFIKKNPPGMDDQLW 85 (272)
T ss_pred hhhhHHHheeecCCeEEEEEEEcCCCcEEEEEEEEcCCccHHHHHHHHHHHHHhcCCCCeeeEeeEEeecCCCCCCcEEE
Confidence 4588899999999999999999999999999988543 33456799999998 699999999988654321 234688
Q ss_pred EEeeechhh-HHHHhhhhhhcCCCcCHHHHHHHHHHHHHHHHHHHhhCCcccCCCCCCceEEcCCCCcEEEeeecCcccc
Q 011138 212 LVLEYISET-VYRVSKHYTRMNQHVPILYVQLYTYQICRALNYLHHVVGVCHRDIKPQNLLVNPHTHQLKICDFGSAKML 290 (492)
Q Consensus 212 lV~E~~~~~-l~~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~yLH~~~givHrDlKp~NILl~~~~~~vkL~DFG~a~~~ 290 (492)
+||||++++ +...+.. .....+++..+..++.||+.||.|||+ +||+||||||+||+++.++ .+||+|||++...
T Consensus 86 iv~e~~~~~~L~~~l~~--~~~~~l~~~~~~~~~~qi~~~l~~LH~-~~ivh~dl~~~nili~~~~-~~~l~Dfg~~~~~ 161 (272)
T cd06637 86 LVMEFCGAGSVTDLIKN--TKGNTLKEEWIAYICREILRGLSHLHQ-HKVIHRDIKGQNVLLTENA-EVKLVDFGVSAQL 161 (272)
T ss_pred EEEEcCCCCcHHHHHHh--ccCCCCCHHHHHHHHHHHHHHHHHHHH-CCCccCCCCHHHEEECCCC-CEEEccCCCceec
Confidence 999999864 4443332 123468889999999999999999997 9999999999999999887 7999999998765
Q ss_pred CCC-CCCccceeccCccCchhhcC----CCCCCcchhhHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCCHHHHh
Q 011138 291 VPG-EPNISYICSRYYRAPELIFG----ATEYTTAIDMWSIGCVLAELLLGQPLFPGESGVDQLVEIIKILGTPTREEIK 365 (492)
Q Consensus 291 ~~~-~~~~~~~gt~~y~aPE~~~~----~~~~~~~~DvwSlGvil~ell~G~~pf~~~~~~~~~~~i~~~~g~p~~~~~~ 365 (492)
... .......|++.|+|||++.+ ...++.++|||||||++|+|++|..||...........+.. .
T Consensus 162 ~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~~~~~~Dv~slGv~l~el~~g~~p~~~~~~~~~~~~~~~---~------- 231 (272)
T cd06637 162 DRTVGRRNTFIGTPYWMAPEVIACDENPDATYDFKSDLWSLGITAIEMAEGAPPLCDMHPMRALFLIPR---N------- 231 (272)
T ss_pred ccccccCCcccccccccCHhHhccccCcCCCCCchhhHHHHHHHHHHHHhCCCCccccCHHHHHHHHhc---C-------
Confidence 322 22335678999999999853 23478899999999999999999999976554333322211 0
Q ss_pred hcCCCCcccCCCcccCCCcccccCCCCChhHhhhhccccccCCCCcCCHHHhhCCCCC
Q 011138 366 CMNPNYTEFKFPQIKAHPWHKIFHKRMPPEALDLVSRLLQYSPSLRCTALEACAHPFF 423 (492)
Q Consensus 366 ~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~Li~~~L~~dP~~R~t~~e~l~Hp~f 423 (492)
..+ ......++.++.+||.+||..||.+|||+.+++.||||
T Consensus 232 ---------~~~--------~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~il~~~~~ 272 (272)
T cd06637 232 ---------PAP--------RLKSKKWSKKFQSFIESCLVKNHSQRPTTEQLMKHPFI 272 (272)
T ss_pred ---------CCC--------CCCCCCcCHHHHHHHHHHcCCChhhCCCHHHHhhCCCC
Confidence 000 01113467899999999999999999999999999998
No 181
>KOG0614 consensus cGMP-dependent protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=1.2e-43 Score=346.99 Aligned_cols=253 Identities=26% Similarity=0.423 Sum_probs=220.4
Q ss_pred ceeEeeeeccCCceEEEEEEEcCCCCEEEEEEeccc-------hhhHHHHHHHHHHcCCCCccccceeeeeccCCCceEE
Q 011138 138 SYMAERVVGTGSFGVVFQAKCLETGDSVAIKKVLQD-------KRYKNRELQIMRLLNHPNVVSLKHCFFSTTEKDELYL 210 (492)
Q Consensus 138 ~y~~~~~lG~G~fg~Vy~~~~~~~g~~vAiK~~~~~-------~~~~~~E~~il~~l~h~nIv~l~~~~~~~~~~~~~~~ 210 (492)
+..+...||-|+||.|-++........+|+|++++. ......|..||..++.|.||++|..| .|..|+
T Consensus 421 dl~~iaTLGvGgFGRVELV~~~~~~~~fAlKilkK~hIVdtkQqeHv~sEr~Im~~~~s~fIvrLYrTf-----rd~kyv 495 (732)
T KOG0614|consen 421 DLKRIATLGVGGFGRVELVKVNSQKATFALKILKKKHIVDTKQQEHVFSERNIMMECRSDFIVRLYRTF-----RDSKYV 495 (732)
T ss_pred hhhhhhhcccCccceEEEEEecccchHHHHHHHhHhhccchhHHHHHHhHHHHHHhcCchHHHHHHHHh-----ccchhh
Confidence 456667899999999999987665556899977542 23344699999999999999999999 889999
Q ss_pred EEEeeechh-hHHHHhhhhhhcCCCcCHHHHHHHHHHHHHHHHHHHhhCCcccCCCCCCceEEcCCCCcEEEeeecCccc
Q 011138 211 NLVLEYISE-TVYRVSKHYTRMNQHVPILYVQLYTYQICRALNYLHHVVGVCHRDIKPQNLLVNPHTHQLKICDFGSAKM 289 (492)
Q Consensus 211 ~lV~E~~~~-~l~~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~yLH~~~givHrDlKp~NILl~~~~~~vkL~DFG~a~~ 289 (492)
|++||-|-| .++..+. ..+.|....+++|+..++.|++|||+ +|||+|||||+|++++.+| .+||.|||+|+.
T Consensus 496 YmLmEaClGGElWTiLr----dRg~Fdd~tarF~~acv~EAfeYLH~-k~iIYRDLKPENllLd~~G-y~KLVDFGFAKk 569 (732)
T KOG0614|consen 496 YMLMEACLGGELWTILR----DRGSFDDYTARFYVACVLEAFEYLHR-KGIIYRDLKPENLLLDNRG-YLKLVDFGFAKK 569 (732)
T ss_pred hhhHHhhcCchhhhhhh----hcCCcccchhhhhHHHHHHHHHHHHh-cCceeccCChhheeeccCC-ceEEeehhhHHH
Confidence 999999865 5665543 35678889999999999999999997 9999999999999999888 799999999999
Q ss_pred cCCCCCCccceeccCccCchhhcCCCCCCcchhhHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCCHHHHhhcCC
Q 011138 290 LVPGEPNISYICSRYYRAPELIFGATEYTTAIDMWSIGCVLAELLLGQPLFPGESGVDQLVEIIKILGTPTREEIKCMNP 369 (492)
Q Consensus 290 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DvwSlGvil~ell~G~~pf~~~~~~~~~~~i~~~~g~p~~~~~~~~~~ 369 (492)
+..+....++||||.|.|||+++..+ .+.++|.||||+++||||+|.+||.+.++...+..|++.+..
T Consensus 570 i~~g~KTwTFcGTpEYVAPEIILnKG-HD~avDyWaLGIli~ELL~G~pPFs~~dpmktYn~ILkGid~----------- 637 (732)
T KOG0614|consen 570 IGSGRKTWTFCGTPEYVAPEIILNKG-HDRAVDYWALGILIYELLTGSPPFSGVDPMKTYNLILKGIDK----------- 637 (732)
T ss_pred hccCCceeeecCCcccccchhhhccC-cchhhHHHHHHHHHHHHHcCCCCCCCCchHHHHHHHHhhhhh-----------
Confidence 99999999999999999999998765 799999999999999999999999999999999999886422
Q ss_pred CCcccCCCcccCCCcccccCCCCChhHhhhhccccccCCCCcCC-----HHHhhCCCCCCCCCCC
Q 011138 370 NYTEFKFPQIKAHPWHKIFHKRMPPEALDLVSRLLQYSPSLRCT-----ALEACAHPFFDDLRDP 429 (492)
Q Consensus 370 ~~~~~~~~~~~~~~~~~~~~~~~s~~~~~Li~~~L~~dP~~R~t-----~~e~l~Hp~f~~~~~~ 429 (492)
+. ++..++..+.+||+++...+|.+|.. +.+|..|.||......
T Consensus 638 ----i~------------~Pr~I~k~a~~Lik~LCr~~P~ERLG~~~~gI~DIkkH~Wf~gfdwe 686 (732)
T KOG0614|consen 638 ----IE------------FPRRITKTATDLIKKLCRDNPTERLGYQKGGINDIKKHRWFEGFDWE 686 (732)
T ss_pred ----hh------------cccccchhHHHHHHHHHhcCcHhhhccccCChHHHHhhhhhhcCChh
Confidence 22 33568999999999999999999996 8899999999987653
No 182
>KOG0577 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=2.2e-43 Score=350.14 Aligned_cols=249 Identities=29% Similarity=0.473 Sum_probs=210.6
Q ss_pred eeEeeeeccCCceEEEEEEEcCCCCEEEEEEeccch-------hhHHHHHHHHHHcCCCCccccceeeeeccCCCceEEE
Q 011138 139 YMAERVVGTGSFGVVFQAKCLETGDSVAIKKVLQDK-------RYKNRELQIMRLLNHPNVVSLKHCFFSTTEKDELYLN 211 (492)
Q Consensus 139 y~~~~~lG~G~fg~Vy~~~~~~~g~~vAiK~~~~~~-------~~~~~E~~il~~l~h~nIv~l~~~~~~~~~~~~~~~~ 211 (492)
|.-.+.||.|+||.||.|++..+.+.||||++.-.. ..+.+|+..|+.++|||++.+.+||.. ....+
T Consensus 28 f~dLrEIGHGSFGAVYfArd~~n~evVAIKKMsySGKQs~EKWqDIlKEVrFL~~l~HPntieYkgCyLr-----e~TaW 102 (948)
T KOG0577|consen 28 FSDLREIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDILKEVRFLRQLRHPNTIEYKGCYLR-----EHTAW 102 (948)
T ss_pred HHHHHHhcCCccceeEEeeccCccceeeeeeccccccccHHHHHHHHHHHHHHHhccCCCcccccceeec-----cchHH
Confidence 666788999999999999999999999999985332 234479999999999999999999954 33478
Q ss_pred EEeeechhhHHHHhhhhhhcCCCcCHHHHHHHHHHHHHHHHHHHhhCCcccCCCCCCceEEcCCCCcEEEeeecCccccC
Q 011138 212 LVLEYISETVYRVSKHYTRMNQHVPILYVQLYTYQICRALNYLHHVVGVCHRDIKPQNLLVNPHTHQLKICDFGSAKMLV 291 (492)
Q Consensus 212 lV~E~~~~~l~~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~yLH~~~givHrDlKp~NILl~~~~~~vkL~DFG~a~~~~ 291 (492)
||||||-|+-.+++.-. .+++-+.++..|+.+.+.||.|||+ ++.||||||..|||++..+ .|||+|||.|...
T Consensus 103 LVMEYClGSAsDlleVh---kKplqEvEIAAi~~gaL~gLaYLHS-~~~IHRDiKAGNILLse~g-~VKLaDFGSAsi~- 176 (948)
T KOG0577|consen 103 LVMEYCLGSASDLLEVH---KKPLQEVEIAAITHGALQGLAYLHS-HNRIHRDIKAGNILLSEPG-LVKLADFGSASIM- 176 (948)
T ss_pred HHHHHHhccHHHHHHHH---hccchHHHHHHHHHHHHHHHHHHHH-hhHHhhhccccceEecCCC-eeeeccccchhhc-
Confidence 99999998766655432 3567888899999999999999997 9999999999999999888 8999999999875
Q ss_pred CCCCCccceeccCccCchhhc--CCCCCCcchhhHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCCHHHHhhcCC
Q 011138 292 PGEPNISYICSRYYRAPELIF--GATEYTTAIDMWSIGCVLAELLLGQPLFPGESGVDQLVEIIKILGTPTREEIKCMNP 369 (492)
Q Consensus 292 ~~~~~~~~~gt~~y~aPE~~~--~~~~~~~~~DvwSlGvil~ell~G~~pf~~~~~~~~~~~i~~~~g~p~~~~~~~~~~ 369 (492)
.+..+++|||+|||||+|+ ..+.|+-++||||||++..||.-.+||+...+....+..|...
T Consensus 177 --~PAnsFvGTPywMAPEVILAMDEGqYdgkvDvWSLGITCIELAERkPPlFnMNAMSALYHIAQN-------------- 240 (948)
T KOG0577|consen 177 --APANSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNAMSALYHIAQN-------------- 240 (948)
T ss_pred --CchhcccCCccccchhHheeccccccCCccceeeccchhhhhhhcCCCccCchHHHHHHHHHhc--------------
Confidence 4556899999999999994 3466999999999999999999999999998888888877652
Q ss_pred CCcccCCCcccCCCcccccCCCCChhHhhhhccccccCCCCcCCHHHhhCCCCCCCCC
Q 011138 370 NYTEFKFPQIKAHPWHKIFHKRMPPEALDLVSRLLQYSPSLRCTALEACAHPFFDDLR 427 (492)
Q Consensus 370 ~~~~~~~~~~~~~~~~~~~~~~~s~~~~~Li~~~L~~dP~~R~t~~e~l~Hp~f~~~~ 427 (492)
.-|.+....| +..++.||..||++-|.+|||.+++|.|+|...-+
T Consensus 241 -----esPtLqs~eW--------S~~F~~Fvd~CLqKipqeRptse~ll~H~fv~R~R 285 (948)
T KOG0577|consen 241 -----ESPTLQSNEW--------SDYFRNFVDSCLQKIPQERPTSEELLKHRFVLRER 285 (948)
T ss_pred -----CCCCCCCchh--------HHHHHHHHHHHHhhCcccCCcHHHHhhcchhccCC
Confidence 1122223333 67899999999999999999999999999987544
No 183
>cd07856 STKc_Sty1_Hog1 Catalytic domain of the Serine/Threonine Kinases, Fungal Mitogen-Activated Protein Kinases Sty1 and Hog1. Serine/Threonine Kinases (STKs), Fungal Mitogen-Activated Protein Kinase (MAPK) Sty1/Hog1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sty1/Hog1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the MAPKs Sty1 from Schizosaccharomyces pombe, Hog1 from Saccharomyces cerevisiae, and similar proteins. MAPKs are important mediators of cellular responses to extracellular signals. Sty1 and Hog1 are stress-activated MAPKs that partipate in transcriptional regulation in response to stress. Sty1 is activated in response to oxidative stress, osmotic stress, and U
Probab=100.00 E-value=2e-41 Score=338.91 Aligned_cols=281 Identities=37% Similarity=0.713 Sum_probs=222.8
Q ss_pred ccceeEeeeeccCCceEEEEEEEcCCCCEEEEEEeccc------hhhHHHHHHHHHHcCCCCccccceeeeeccCCCceE
Q 011138 136 TISYMAERVVGTGSFGVVFQAKCLETGDSVAIKKVLQD------KRYKNRELQIMRLLNHPNVVSLKHCFFSTTEKDELY 209 (492)
Q Consensus 136 ~~~y~~~~~lG~G~fg~Vy~~~~~~~g~~vAiK~~~~~------~~~~~~E~~il~~l~h~nIv~l~~~~~~~~~~~~~~ 209 (492)
.++|.+.+.||.|+||.||+|.+..+|+.||||++.+. .....+|+.+++.++||||++++++|... ...
T Consensus 9 ~~~y~~~~~ig~g~~g~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~----~~~ 84 (328)
T cd07856 9 TNRYVDLQPVGMGAFGLVCSARDQLTGQNVAIKKIMKPFSTPVLAKRTYRELKLLKHLRHENIISLSDIFISP----LED 84 (328)
T ss_pred ccceEEEEeecccCCeEEEEEEECCCCCEEEEEEecccccccchhHHHHHHHHHHHhcCCCCeeeEeeeEecC----CCc
Confidence 45699999999999999999999999999999987432 23455799999999999999999987432 235
Q ss_pred EEEEeeechhhHHHHhhhhhhcCCCcCHHHHHHHHHHHHHHHHHHHhhCCcccCCCCCCceEEcCCCCcEEEeeecCccc
Q 011138 210 LNLVLEYISETVYRVSKHYTRMNQHVPILYVQLYTYQICRALNYLHHVVGVCHRDIKPQNLLVNPHTHQLKICDFGSAKM 289 (492)
Q Consensus 210 ~~lV~E~~~~~l~~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~yLH~~~givHrDlKp~NILl~~~~~~vkL~DFG~a~~ 289 (492)
.|+||||+++++...+. ...++...+..++.||+.||.|||+ +||+||||||.|||++.++ .+||+|||++..
T Consensus 85 ~~lv~e~~~~~L~~~~~-----~~~~~~~~~~~~~~ql~~aL~~LH~-~~iiH~dl~p~Nili~~~~-~~~l~dfg~~~~ 157 (328)
T cd07856 85 IYFVTELLGTDLHRLLT-----SRPLEKQFIQYFLYQILRGLKYVHS-AGVVHRDLKPSNILINENC-DLKICDFGLARI 157 (328)
T ss_pred EEEEeehhccCHHHHHh-----cCCCCHHHHHHHHHHHHHHHHHHHh-CCcccCCCCHHHEeECCCC-CEEeCccccccc
Confidence 78999999877665443 2457888889999999999999997 8999999999999999877 799999999875
Q ss_pred cCCCCCCccceeccCccCchhhcCCCCCCcchhhHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCCHHHHhhcCC
Q 011138 290 LVPGEPNISYICSRYYRAPELIFGATEYTTAIDMWSIGCVLAELLLGQPLFPGESGVDQLVEIIKILGTPTREEIKCMNP 369 (492)
Q Consensus 290 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DvwSlGvil~ell~G~~pf~~~~~~~~~~~i~~~~g~p~~~~~~~~~~ 369 (492)
.. .......++..|+|||.+.+...++.++|||||||++|+|++|++||.+.........+.+.+|.++.+.+.....
T Consensus 158 ~~--~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~il~el~tg~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 235 (328)
T cd07856 158 QD--PQMTGYVSTRYYRAPEIMLTWQKYDVEVDIWSAGCIFAEMLEGKPLFPGKDHVNQFSIITDLLGTPPDDVINTICS 235 (328)
T ss_pred cC--CCcCCCcccccccCceeeeccCCcCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCCHHHHHhccc
Confidence 42 2233457788999999986655689999999999999999999999999888888888888888887665542211
Q ss_pred CCcccC----CCcccCCCcccccCCCCChhHhhhhccccccCCCCcCCHHHhhCCCCCCCCCCCCC
Q 011138 370 NYTEFK----FPQIKAHPWHKIFHKRMPPEALDLVSRLLQYSPSLRCTALEACAHPFFDDLRDPNT 431 (492)
Q Consensus 370 ~~~~~~----~~~~~~~~~~~~~~~~~s~~~~~Li~~~L~~dP~~R~t~~e~l~Hp~f~~~~~~~~ 431 (492)
. .... ++.....++.. ..+.+++++.++|++||+.||++|||+.+++.||||...+++..
T Consensus 236 ~-~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~li~~~l~~~P~~R~t~~ell~~~~~~~~~~~~~ 299 (328)
T cd07856 236 E-NTLRFVQSLPKREPVPFSE-KFKNADPSAIDLLEKMLVFDPQKRISAAEALAHPYLAPYHDPTD 299 (328)
T ss_pred h-hhHHHHhhccccCCCcHHH-HcCCCCHHHHHHHHHHcCCChhhCCCHHHHhcCCccccccCCcc
Confidence 1 0000 01101111111 12357889999999999999999999999999999998876533
No 184
>cd06619 PKc_MKK5 Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 5. Protein kinases (PKs), MAP kinase kinase 5 (MKK5) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK5, also referred to as MEK5, is a dual-specificity PK that p
Probab=100.00 E-value=5.4e-42 Score=335.05 Aligned_cols=251 Identities=25% Similarity=0.449 Sum_probs=198.8
Q ss_pred ceeEeeeeccCCceEEEEEEEcCCCCEEEEEEeccc-----hhhHHHHHHHHHHcCCCCccccceeeeeccCCCceEEEE
Q 011138 138 SYMAERVVGTGSFGVVFQAKCLETGDSVAIKKVLQD-----KRYKNRELQIMRLLNHPNVVSLKHCFFSTTEKDELYLNL 212 (492)
Q Consensus 138 ~y~~~~~lG~G~fg~Vy~~~~~~~g~~vAiK~~~~~-----~~~~~~E~~il~~l~h~nIv~l~~~~~~~~~~~~~~~~l 212 (492)
+|++.+.||+|+||.||+|.+..+++.||+|.+..+ .....+|+.+++.++||||+++++++.. ..+.++
T Consensus 2 ~~~~~~~lg~g~~~~v~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~-----~~~~~l 76 (279)
T cd06619 2 DIQYQEILGHGNGGTVYKAYHLLTRRILAVKVIPLDITVELQKQIMSELEILYKCDSPYIIGFYGAFFV-----ENRISI 76 (279)
T ss_pred cchheeeeccCCCeEEEEEEEcCCCcEEEEEEEecCCChHHHHHHHHHHHHHHhCCCCCeeeEEEEEEE-----CCEEEE
Confidence 478889999999999999999999999999988543 1234579999999999999999999843 345789
Q ss_pred EeeechhhHHHHhhhhhhcCCCcCHHHHHHHHHHHHHHHHHHHhhCCcccCCCCCCceEEcCCCCcEEEeeecCccccCC
Q 011138 213 VLEYISETVYRVSKHYTRMNQHVPILYVQLYTYQICRALNYLHHVVGVCHRDIKPQNLLVNPHTHQLKICDFGSAKMLVP 292 (492)
Q Consensus 213 V~E~~~~~l~~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~yLH~~~givHrDlKp~NILl~~~~~~vkL~DFG~a~~~~~ 292 (492)
||||++++.+... ..+++..+..++.||+.||.|||+ .||+|+||||+|||++.++ .+||+|||++.....
T Consensus 77 v~e~~~~~~l~~~-------~~~~~~~~~~~~~qi~~~l~~lH~-~~i~H~dlkp~Nill~~~~-~~~l~dfg~~~~~~~ 147 (279)
T cd06619 77 CTEFMDGGSLDVY-------RKIPEHVLGRIAVAVVKGLTYLWS-LKILHRDVKPSNMLVNTRG-QVKLCDFGVSTQLVN 147 (279)
T ss_pred EEecCCCCChHHh-------hcCCHHHHHHHHHHHHHHHHHHHH-CCEeeCCCCHHHEEECCCC-CEEEeeCCcceeccc
Confidence 9999998765432 346788889999999999999997 9999999999999999888 799999999976533
Q ss_pred CCCCccceeccCccCchhhcCCCCCCcchhhHHHHHHHHHHHhCCCCCCCCChHHH---HHHHHHHhCCCCHHHHhhcCC
Q 011138 293 GEPNISYICSRYYRAPELIFGATEYTTAIDMWSIGCVLAELLLGQPLFPGESGVDQ---LVEIIKILGTPTREEIKCMNP 369 (492)
Q Consensus 293 ~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DvwSlGvil~ell~G~~pf~~~~~~~~---~~~i~~~~g~p~~~~~~~~~~ 369 (492)
. ......||..|+|||++.+. .++.++|+|||||++|+|++|..||......+. ..........+.
T Consensus 148 ~-~~~~~~~~~~y~aPE~~~~~-~~~~~~DvwslG~~l~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~--------- 216 (279)
T cd06619 148 S-IAKTYVGTNAYMAPERISGE-QYGIHSDVWSLGISFMELALGRFPYPQIQKNQGSLMPLQLLQCIVDED--------- 216 (279)
T ss_pred c-cccCCCCChhhcCceeecCC-CCCCcchHHHHHHHHHHHHhCCCCchhhcccccccchHHHHHHHhccC---------
Confidence 2 23346889999999999655 489999999999999999999999965332111 011111110000
Q ss_pred CCcccCCCcccCCCcccccCCCCChhHhhhhccccccCCCCcCCHHHhhCCCCCCCCC
Q 011138 370 NYTEFKFPQIKAHPWHKIFHKRMPPEALDLVSRLLQYSPSLRCTALEACAHPFFDDLR 427 (492)
Q Consensus 370 ~~~~~~~~~~~~~~~~~~~~~~~s~~~~~Li~~~L~~dP~~R~t~~e~l~Hp~f~~~~ 427 (492)
.+. ......++++++||.+||+.||.+||++.++++||||....
T Consensus 217 ------~~~--------~~~~~~~~~~~~li~~~l~~~P~~Rp~~~eil~~~~~~~~~ 260 (279)
T cd06619 217 ------PPV--------LPVGQFSEKFVHFITQCMRKQPKERPAPENLMDHPFIVQYN 260 (279)
T ss_pred ------CCC--------CCCCcCCHHHHHHHHHHhhCChhhCCCHHHHhcCccccccc
Confidence 000 01124678999999999999999999999999999998764
No 185
>cd06638 STKc_myosinIIIA Catalytic domain of the Protein Serine/Threonine Kinase, Class IIIA myosin. Serine/threonine kinases (STKs), class IIIA myosin subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins containing an N-terminal kinase catalytic domain and a C-terminal actin-binding domain. Class III myosins may play an important role in maintaining the structural integrity of photoreceptor cell microvilli. In photoreceptor cells, they may also function as cargo carriers during light-dependent translocation of proteins such as transducin and arrestin. Class IIIA myosin is highly expressed in retina and in inner ear
Probab=100.00 E-value=1.5e-41 Score=332.80 Aligned_cols=262 Identities=23% Similarity=0.330 Sum_probs=206.1
Q ss_pred ccccceeEeeeeccCCceEEEEEEEcCCCCEEEEEEeccc---hhhHHHHHHHHHHc-CCCCccccceeeeeccCCCceE
Q 011138 134 KQTISYMAERVVGTGSFGVVFQAKCLETGDSVAIKKVLQD---KRYKNRELQIMRLL-NHPNVVSLKHCFFSTTEKDELY 209 (492)
Q Consensus 134 ~~~~~y~~~~~lG~G~fg~Vy~~~~~~~g~~vAiK~~~~~---~~~~~~E~~il~~l-~h~nIv~l~~~~~~~~~~~~~~ 209 (492)
....+|.+.+.||+|+||.||+|.+..+++.+|+|++... .....+|+.+++.+ +||||+++++++......+..+
T Consensus 15 ~~~~~~~~~~~lg~g~~~~vy~~~~~~~~~~~~ik~~~~~~~~~~~~~~e~~~l~~l~~h~~i~~~~~~~~~~~~~~~~~ 94 (286)
T cd06638 15 DPSDTWEIIETIGKGTYGKVFKVLNKKNGSKAAVKILDPIHDIDEEIEAEYNILKALSDHPNVVKFYGMYYKKDVKNGDQ 94 (286)
T ss_pred CcccceeeeeeeccCCCcEEEEEEECCCCceeEEEeeccccchHHHHHHHHHHHHHHhcCCCeeeeeeeeeecccCCCCe
Confidence 4456799999999999999999999999999999987542 23456799999999 6999999999886555455567
Q ss_pred EEEEeeechhh-HHHHhhhhhhcCCCcCHHHHHHHHHHHHHHHHHHHhhCCcccCCCCCCceEEcCCCCcEEEeeecCcc
Q 011138 210 LNLVLEYISET-VYRVSKHYTRMNQHVPILYVQLYTYQICRALNYLHHVVGVCHRDIKPQNLLVNPHTHQLKICDFGSAK 288 (492)
Q Consensus 210 ~~lV~E~~~~~-l~~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~yLH~~~givHrDlKp~NILl~~~~~~vkL~DFG~a~ 288 (492)
+++||||++++ +.+.+.........+++..+..++.||+.||.|||+ ++|+||||||+||+++.++ .+||+|||++.
T Consensus 95 ~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~-~~i~H~dlkp~nili~~~~-~~kl~dfg~~~ 172 (286)
T cd06638 95 LWLVLELCNGGSVTDLVKGFLKRGERMEEPIIAYILHEALMGLQHLHV-NKTIHRDVKGNNILLTTEG-GVKLVDFGVSA 172 (286)
T ss_pred EEEEEeecCCCCHHHHHHHhhccCccccHHHHHHHHHHHHHHHHHHHh-CCccccCCCHHhEEECCCC-CEEEccCCcee
Confidence 89999999865 444443333334568889999999999999999997 9999999999999999887 79999999987
Q ss_pred ccCCCC-CCccceeccCccCchhhcC----CCCCCcchhhHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCCHHH
Q 011138 289 MLVPGE-PNISYICSRYYRAPELIFG----ATEYTTAIDMWSIGCVLAELLLGQPLFPGESGVDQLVEIIKILGTPTREE 363 (492)
Q Consensus 289 ~~~~~~-~~~~~~gt~~y~aPE~~~~----~~~~~~~~DvwSlGvil~ell~G~~pf~~~~~~~~~~~i~~~~g~p~~~~ 363 (492)
...... ......|++.|+|||++.. ...++.++|||||||++|+|++|..||........+..+...
T Consensus 173 ~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Dv~slGvi~~el~~g~~p~~~~~~~~~~~~~~~~-------- 244 (286)
T cd06638 173 QLTSTRLRRNTSVGTPFWMAPEVIACEQQLDSTYDARCDVWSLGITAIELGDGDPPLADLHPMRALFKIPRN-------- 244 (286)
T ss_pred ecccCCCccccccCCCcccChhhhchhhhccccccchhhhhhHHHHHHHHhcCCCCCCCCchhHHHhhcccc--------
Confidence 654322 2234578999999999843 234788999999999999999999999876544333222110
Q ss_pred HhhcCCCCcccCCCcccCCCcccccCCCCChhHhhhhccccccCCCCcCCHHHhhCCCCC
Q 011138 364 IKCMNPNYTEFKFPQIKAHPWHKIFHKRMPPEALDLVSRLLQYSPSLRCTALEACAHPFF 423 (492)
Q Consensus 364 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~Li~~~L~~dP~~R~t~~e~l~Hp~f 423 (492)
..+. ...+...+.++.+||.+||+.||++|||+.++++|+||
T Consensus 245 -----------~~~~-------~~~~~~~~~~~~~li~~~l~~~p~~Rps~~ell~~~~~ 286 (286)
T cd06638 245 -----------PPPT-------LHQPELWSNEFNDFIRKCLTKDYEKRPTVSDLLQHVFI 286 (286)
T ss_pred -----------CCCc-------ccCCCCcCHHHHHHHHHHccCCcccCCCHHHHhhcccC
Confidence 0000 00112357789999999999999999999999999997
No 186
>cd05102 PTKc_VEGFR3 Catalytic domain of the Protein Tyrosine Kinase, Vascular Endothelial Growth Factor Receptor 3. Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor 3 (VEGFR3); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR3 (or Flt4) is a member of the VEGFR subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. In VEGFR3, the fifth Ig-like domain is replaced by a disulfide bridge. The binding of VEGFRs to their ligands, the VEGFs, leads to receptor dimerization, activation, and intracellular signaling. V
Probab=100.00 E-value=4.4e-42 Score=345.09 Aligned_cols=250 Identities=26% Similarity=0.390 Sum_probs=191.0
Q ss_pred ccceeEeeeeccCCceEEEEEEEc-----CCCCEEEEEEeccc-----hhhHHHHHHHHHHc-CCCCccccceeeeeccC
Q 011138 136 TISYMAERVVGTGSFGVVFQAKCL-----ETGDSVAIKKVLQD-----KRYKNRELQIMRLL-NHPNVVSLKHCFFSTTE 204 (492)
Q Consensus 136 ~~~y~~~~~lG~G~fg~Vy~~~~~-----~~g~~vAiK~~~~~-----~~~~~~E~~il~~l-~h~nIv~l~~~~~~~~~ 204 (492)
..+|++.+.||+|+||.||+|.+. .++..||||++... .....+|+.+++.+ +||||+++++++..
T Consensus 6 ~~~~~~~~~lG~G~fg~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~~~~~~~~--- 82 (338)
T cd05102 6 RDRLRLGKVLGHGAFGKVVEASAFGIDKKSSCNTVAVKMLKEGATASEHKALMSELKILIHIGNHLNVVNLLGACTK--- 82 (338)
T ss_pred hhHceeeeEeccCCcceEEEEEEeccCCcccchhhheeccccccchHHHHHHHHHHHHHHHhccCcceeeEEeEecC---
Confidence 457999999999999999999752 34678999988542 12345799999999 89999999998742
Q ss_pred CCceEEEEEeeechhh-HHHHhhhhhh-----------------------------------------------------
Q 011138 205 KDELYLNLVLEYISET-VYRVSKHYTR----------------------------------------------------- 230 (492)
Q Consensus 205 ~~~~~~~lV~E~~~~~-l~~~~~~~~~----------------------------------------------------- 230 (492)
....+++||||++++ |.+.+.....
T Consensus 83 -~~~~~~lv~ey~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 161 (338)
T cd05102 83 -PNGPLMVIVEFCKYGNLSNFLRAKREFFSPYREKSPKQRGRFRAMVEQSRVDRRIEAGQASVLFSRFQPSTSGSTNPPQ 161 (338)
T ss_pred -CCCceEEEEecCCCCcHHHHHHhcchhcccccccchhhhhhhhhhhhhhccccccccccCCccccccccccCcccccch
Confidence 223578999999864 4444332110
Q ss_pred -----cCCCcCHHHHHHHHHHHHHHHHHHHhhCCcccCCCCCCceEEcCCCCcEEEeeecCccccCCCCC---Cccceec
Q 011138 231 -----MNQHVPILYVQLYTYQICRALNYLHHVVGVCHRDIKPQNLLVNPHTHQLKICDFGSAKMLVPGEP---NISYICS 302 (492)
Q Consensus 231 -----~~~~~~~~~~~~i~~qi~~aL~yLH~~~givHrDlKp~NILl~~~~~~vkL~DFG~a~~~~~~~~---~~~~~gt 302 (492)
....+++..+..++.||+.||.|||+ +||+||||||+|||++.++ .+||+|||+++....... .....++
T Consensus 162 ~~~~~~~~~l~~~~~~~~~~qi~~aL~~LH~-~~ivHrDiKp~Nil~~~~~-~~kl~DfG~a~~~~~~~~~~~~~~~~~~ 239 (338)
T cd05102 162 ETDDLWKSPLTMEDLICYSFQVARGMEFLAS-RKCIHRDLAARNILLSENN-VVKICDFGLARDIYKDPDYVRKGSARLP 239 (338)
T ss_pred hccccccCCCCHHHHHHHHHHHHHHHHHHHH-CCEECCCCccceEEEcCCC-cEEEeecccccccccCcchhcccCCCCC
Confidence 02347778889999999999999997 9999999999999999887 799999999976533221 1233456
Q ss_pred cCccCchhhcCCCCCCcchhhHHHHHHHHHHHh-CCCCCCCCChHHHHHHHHHHhCCCCHHHHhhcCCCCcccCCCcccC
Q 011138 303 RYYRAPELIFGATEYTTAIDMWSIGCVLAELLL-GQPLFPGESGVDQLVEIIKILGTPTREEIKCMNPNYTEFKFPQIKA 381 (492)
Q Consensus 303 ~~y~aPE~~~~~~~~~~~~DvwSlGvil~ell~-G~~pf~~~~~~~~~~~i~~~~g~p~~~~~~~~~~~~~~~~~~~~~~ 381 (492)
+.|+|||++.+. .++.++|||||||++|||++ |..||.+....+.+...+.. +. ...
T Consensus 240 ~~y~aPE~~~~~-~~~~~sDiwslG~il~el~~~g~~pf~~~~~~~~~~~~~~~-~~--------------~~~------ 297 (338)
T cd05102 240 LKWMAPESIFDK-VYTTQSDVWSFGVLLWEIFSLGASPYPGVQINEEFCQRLKD-GT--------------RMR------ 297 (338)
T ss_pred ccccCcHHhhcC-CCCcccCHHHHHHHHHHHHhCCCCCCCCCCccHHHHHHHhc-CC--------------CCC------
Confidence 789999999654 48999999999999999997 99999886544443333221 00 000
Q ss_pred CCcccccCCCCChhHhhhhccccccCCCCcCCHHHhhC
Q 011138 382 HPWHKIFHKRMPPEALDLVSRLLQYSPSLRCTALEACA 419 (492)
Q Consensus 382 ~~~~~~~~~~~s~~~~~Li~~~L~~dP~~R~t~~e~l~ 419 (492)
.+..+++++.+||.+||..||.+|||+.++++
T Consensus 298 ------~~~~~~~~l~~li~~cl~~dp~~RPs~~el~~ 329 (338)
T cd05102 298 ------APENATPEIYRIMLACWQGDPKERPTFSALVE 329 (338)
T ss_pred ------CCCCCCHHHHHHHHHHccCChhhCcCHHHHHH
Confidence 12356889999999999999999999999975
No 187
>KOG0668 consensus Casein kinase II, alpha subunit [Signal transduction mechanisms; Cell cycle control, cell division, chromosome partitioning; Transcription]
Probab=100.00 E-value=2.2e-43 Score=314.23 Aligned_cols=282 Identities=31% Similarity=0.625 Sum_probs=232.1
Q ss_pred cceeEeeeeccCCceEEEEEEEcCCCCEEEEEEeccc-hhhHHHHHHHHHHcC-CCCccccceeeeeccCCCceEEEEEe
Q 011138 137 ISYMAERVVGTGSFGVVFQAKCLETGDSVAIKKVLQD-KRYKNRELQIMRLLN-HPNVVSLKHCFFSTTEKDELYLNLVL 214 (492)
Q Consensus 137 ~~y~~~~~lG~G~fg~Vy~~~~~~~g~~vAiK~~~~~-~~~~~~E~~il~~l~-h~nIv~l~~~~~~~~~~~~~~~~lV~ 214 (492)
.+|++.+.+|+|-|+.||.|.+..+++.+.||+++.- +....||+.||+.|. ||||++|++...+.. .....||+
T Consensus 38 ddYeivrk~GRGKYSEVFeg~~~~~~eK~ViKiLKPVkkkKIkREikIL~nL~gg~NIi~L~DiV~Dp~---SktpaLiF 114 (338)
T KOG0668|consen 38 DDYEIVRKVGRGKYSEVFEGINITNNEKCVIKILKPVKKKKIKREIKILQNLRGGPNIIKLLDIVKDPE---SKTPSLIF 114 (338)
T ss_pred chHHHHHHHcCccHhhHhcccccCCCceEEEeeechHHHHHHHHHHHHHHhccCCCCeeehhhhhcCcc---ccCchhHh
Confidence 4699999999999999999999999999999998653 345679999999997 999999999874433 22356899
Q ss_pred eechhhHHHHhhhhhhcCCCcCHHHHHHHHHHHHHHHHHHHhhCCcccCCCCCCceEEcCCCCcEEEeeecCccccCCCC
Q 011138 215 EYISETVYRVSKHYTRMNQHVPILYVQLYTYQICRALNYLHHVVGVCHRDIKPQNLLVNPHTHQLKICDFGSAKMLVPGE 294 (492)
Q Consensus 215 E~~~~~l~~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~yLH~~~givHrDlKp~NILl~~~~~~vkL~DFG~a~~~~~~~ 294 (492)
||+...-+. ..-..++...++.+++|++.||.|+|+ .||+|||+||.|++||.....++|+|+|+|....++.
T Consensus 115 E~v~n~Dfk------~ly~tl~d~dIryY~~elLkALdyCHS-~GImHRDVKPhNvmIdh~~rkLrlIDWGLAEFYHp~~ 187 (338)
T KOG0668|consen 115 EYVNNTDFK------QLYPTLTDYDIRYYIYELLKALDYCHS-MGIMHRDVKPHNVMIDHELRKLRLIDWGLAEFYHPGK 187 (338)
T ss_pred hhhccccHH------HHhhhhchhhHHHHHHHHHHHHhHHHh-cCcccccCCcceeeechhhceeeeeecchHhhcCCCc
Confidence 999875332 223457778899999999999999997 8999999999999999877789999999999998888
Q ss_pred CCccceeccCccCchhhcCCCCCCcchhhHHHHHHHHHHHhCCCCC-CCCChHHHHHHHHHHhCCCCHHHHh-----hcC
Q 011138 295 PNISYICSRYYRAPELIFGATEYTTAIDMWSIGCVLAELLLGQPLF-PGESGVDQLVEIIKILGTPTREEIK-----CMN 368 (492)
Q Consensus 295 ~~~~~~gt~~y~aPE~~~~~~~~~~~~DvwSlGvil~ell~G~~pf-~~~~~~~~~~~i~~~~g~p~~~~~~-----~~~ 368 (492)
.....+.+.+|--||++..-..|+..-|+|||||+|..|+..+.|| .|.++.+|+.+|.+++|+......- ..+
T Consensus 188 eYnVRVASRyfKGPELLVdy~~YDYSLD~WS~GcmlA~miFrkepFFhG~dN~DQLVkIakVLGt~el~~Yl~KY~i~Ld 267 (338)
T KOG0668|consen 188 EYNVRVASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVKIAKVLGTDELYAYLNKYQIDLD 267 (338)
T ss_pred eeeeeeehhhcCCchheeechhccccHHHHHHHHHHHHHHhccCcccCCCCCHHHHHHHHHHhChHHHHHHHHHHccCCC
Confidence 8888899999999999988888999999999999999999988775 7889999999999999975433221 123
Q ss_pred CCCcccCCCcccCCCcccccCC----CCChhHhhhhccccccCCCCcCCHHHhhCCCCCCCCCCC
Q 011138 369 PNYTEFKFPQIKAHPWHKIFHK----RMPPEALDLVSRLLQYSPSLRCTALEACAHPFFDDLRDP 429 (492)
Q Consensus 369 ~~~~~~~~~~~~~~~~~~~~~~----~~s~~~~~Li~~~L~~dP~~R~t~~e~l~Hp~f~~~~~~ 429 (492)
|.|..+ .......+|....+. -+++++.|||.++|.+|-++|+||.|++.||||..++..
T Consensus 268 p~~~~i-~~~~~rk~w~~Fi~~~n~hl~~peaiDlldklLrYDHqeRlTakEam~HpyF~~~~~~ 331 (338)
T KOG0668|consen 268 PQFEDI-LGRHSRKPWSRFINSENQHLVSPEAIDLLDKLLRYDHQERLTAKEAMAHPYFAPVREA 331 (338)
T ss_pred hhHhhH-hhccccccHHHhCCccccccCChHHHHHHHHHHhhccccccchHHHhcCchHHHHHHH
Confidence 333321 112233455544432 357999999999999999999999999999999987653
No 188
>KOG0603 consensus Ribosomal protein S6 kinase [Signal transduction mechanisms]
Probab=100.00 E-value=9.9e-43 Score=351.64 Aligned_cols=245 Identities=31% Similarity=0.460 Sum_probs=203.7
Q ss_pred cccceeEeeeeccCCceEEEEEEEcCCCCEEEEEEeccchhhHHHHHHHHHHc-CCCCccccceeeeeccCCCceEEEEE
Q 011138 135 QTISYMAERVVGTGSFGVVFQAKCLETGDSVAIKKVLQDKRYKNRELQIMRLL-NHPNVVSLKHCFFSTTEKDELYLNLV 213 (492)
Q Consensus 135 ~~~~y~~~~~lG~G~fg~Vy~~~~~~~g~~vAiK~~~~~~~~~~~E~~il~~l-~h~nIv~l~~~~~~~~~~~~~~~~lV 213 (492)
....|.+...+|.|+|+.|..+.+..+++.+++|++.+......+|+.++... +||||+++++.+ .+..+.|+|
T Consensus 320 ~~~~y~~~~~~~~gs~s~~~~~~~~~t~~~~~vkii~~~~~~~~~e~~~~~~~~~h~niv~~~~v~-----~~~~~~~~v 394 (612)
T KOG0603|consen 320 FTESYEFREELGEGSFSAVKYCESSPTDQEPAVKIISKRADDNQDEIPISLLVRDHPNIVKSHDVY-----EDGKEIYLV 394 (612)
T ss_pred cchhhccccccCCCCccceeeeeccccccchhheeccccccccccccchhhhhcCCCcceeeccee-----cCCceeeee
Confidence 45679999999999999999999999999999999988777777888776655 699999999999 777889999
Q ss_pred eeechhhHHHHhhhhhhcCCCcCHHHHHHHHHHHHHHHHHHHhhCCcccCCCCCCceEE-cCCCCcEEEeeecCccccCC
Q 011138 214 LEYISETVYRVSKHYTRMNQHVPILYVQLYTYQICRALNYLHHVVGVCHRDIKPQNLLV-NPHTHQLKICDFGSAKMLVP 292 (492)
Q Consensus 214 ~E~~~~~l~~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~yLH~~~givHrDlKp~NILl-~~~~~~vkL~DFG~a~~~~~ 292 (492)
||++.|+.+.. + ......+. ..+..|++||+.|+.|||. +|||||||||+|||+ +..+ .++|+|||.++....
T Consensus 395 ~e~l~g~ell~--r-i~~~~~~~-~e~~~w~~~lv~Av~~LH~-~gvvhRDLkp~NIL~~~~~g-~lrltyFG~a~~~~~ 468 (612)
T KOG0603|consen 395 MELLDGGELLR--R-IRSKPEFC-SEASQWAAELVSAVDYLHE-QGVVHRDLKPGNILLDGSAG-HLRLTYFGFWSELER 468 (612)
T ss_pred ehhccccHHHH--H-HHhcchhH-HHHHHHHHHHHHHHHHHHh-cCeeecCCChhheeecCCCC-cEEEEEechhhhCch
Confidence 99999764421 1 11222233 6788899999999999997 999999999999999 4666 799999999987654
Q ss_pred CCCCccceeccCccCchhhcCCCCCCcchhhHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCCHHHHhhcCCCCc
Q 011138 293 GEPNISYICSRYYRAPELIFGATEYTTAIDMWSIGCVLAELLLGQPLFPGESGVDQLVEIIKILGTPTREEIKCMNPNYT 372 (492)
Q Consensus 293 ~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DvwSlGvil~ell~G~~pf~~~~~~~~~~~i~~~~g~p~~~~~~~~~~~~~ 372 (492)
. ..+.+-|..|.|||++. ...|+.++||||||++||+||+|+.||...... .+|...++.+..
T Consensus 469 ~--~~tp~~t~~y~APEvl~-~~~yt~acD~WSLGvlLy~ML~G~tp~~~~P~~---~ei~~~i~~~~~----------- 531 (612)
T KOG0603|consen 469 S--CDTPALTLQYVAPEVLA-IQEYTEACDWWSLGVLLYEMLTGRTLFAAHPAG---IEIHTRIQMPKF----------- 531 (612)
T ss_pred h--hcccchhhcccChhhhc-cCCCCcchhhHHHHHHHHHHHhCCCccccCCch---HHHHHhhcCCcc-----------
Confidence 4 44557789999999996 455999999999999999999999999876655 334443333321
Q ss_pred ccCCCcccCCCcccccCCCCChhHhhhhccccccCCCCcCCHHHhhCCCCC
Q 011138 373 EFKFPQIKAHPWHKIFHKRMPPEALDLVSRLLQYSPSLRCTALEACAHPFF 423 (492)
Q Consensus 373 ~~~~~~~~~~~~~~~~~~~~s~~~~~Li~~~L~~dP~~R~t~~e~l~Hp~f 423 (492)
...+|++++|||++||++||.+|+++.+++.||||
T Consensus 532 ----------------s~~vS~~AKdLl~~LL~~dP~~Rl~~~~i~~h~w~ 566 (612)
T KOG0603|consen 532 ----------------SECVSDEAKDLLQQLLQVDPALRLGADEIGAHPWF 566 (612)
T ss_pred ----------------ccccCHHHHHHHHHhccCChhhCcChhhhccCcch
Confidence 13589999999999999999999999999999999
No 189
>KOG0197 consensus Tyrosine kinases [Signal transduction mechanisms]
Probab=100.00 E-value=1.2e-42 Score=345.67 Aligned_cols=241 Identities=26% Similarity=0.363 Sum_probs=198.0
Q ss_pred ceeEeeeeccCCceEEEEEEEcCCCCEEEEEEeccc---hhhHHHHHHHHHHcCCCCccccceeeeeccCCCceEEEEEe
Q 011138 138 SYMAERVVGTGSFGVVFQAKCLETGDSVAIKKVLQD---KRYKNRELQIMRLLNHPNVVSLKHCFFSTTEKDELYLNLVL 214 (492)
Q Consensus 138 ~y~~~~~lG~G~fg~Vy~~~~~~~g~~vAiK~~~~~---~~~~~~E~~il~~l~h~nIv~l~~~~~~~~~~~~~~~~lV~ 214 (492)
.+.+++.||+|.||.||.|.+..+ ..||+|.+... ...+.+|++||+.|+|+|||++++++... .-+||||
T Consensus 207 ~l~l~~~LG~G~FG~V~~g~~~~~-~~vavk~ik~~~m~~~~f~~Ea~iMk~L~H~~lV~l~gV~~~~-----~piyIVt 280 (468)
T KOG0197|consen 207 ELKLIRELGSGQFGEVWLGKWNGS-TKVAVKTIKEGSMSPEAFLREAQIMKKLRHEKLVKLYGVCTKQ-----EPIYIVT 280 (468)
T ss_pred HHHHHHHhcCCccceEEEEEEcCC-CcccceEEeccccChhHHHHHHHHHHhCcccCeEEEEEEEecC-----CceEEEE
Confidence 466778999999999999998532 47999988543 34455899999999999999999998432 2489999
Q ss_pred eech-hhHHHHhhhhhhcCCCcCHHHHHHHHHHHHHHHHHHHhhCCcccCCCCCCceEEcCCCCcEEEeeecCccccCCC
Q 011138 215 EYIS-ETVYRVSKHYTRMNQHVPILYVQLYTYQICRALNYLHHVVGVCHRDIKPQNLLVNPHTHQLKICDFGSAKMLVPG 293 (492)
Q Consensus 215 E~~~-~~l~~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~yLH~~~givHrDlKp~NILl~~~~~~vkL~DFG~a~~~~~~ 293 (492)
||+. |.|++.++. .....+.......++.|||.|++||++ +++|||||...||||+.+. .+||+|||+|+...++
T Consensus 281 E~m~~GsLl~yLr~--~~~~~l~~~~Ll~~a~qIaeGM~YLes-~~~IHRDLAARNiLV~~~~-~vKIsDFGLAr~~~d~ 356 (468)
T KOG0197|consen 281 EYMPKGSLLDYLRT--REGGLLNLPQLLDFAAQIAEGMAYLES-KNYIHRDLAARNILVDEDL-VVKISDFGLARLIGDD 356 (468)
T ss_pred EecccCcHHHHhhh--cCCCccchHHHHHHHHHHHHHHHHHHh-CCccchhhhhhheeeccCc-eEEEcccccccccCCC
Confidence 9998 556666554 345678888899999999999999997 9999999999999999887 8999999999954333
Q ss_pred CCCcccee---ccCccCchhhcCCCCCCcchhhHHHHHHHHHHHh-CCCCCCCCChHHHHHHHHHHhCCCCHHHHhhcCC
Q 011138 294 EPNISYIC---SRYYRAPELIFGATEYTTAIDMWSIGCVLAELLL-GQPLFPGESGVDQLVEIIKILGTPTREEIKCMNP 369 (492)
Q Consensus 294 ~~~~~~~g---t~~y~aPE~~~~~~~~~~~~DvwSlGvil~ell~-G~~pf~~~~~~~~~~~i~~~~g~p~~~~~~~~~~ 369 (492)
. .....| ...|.|||.+... .++.++|||||||+||||+| |+.||.+.++.+.+..+.+....|.
T Consensus 357 ~-Y~~~~~~kfPIkWtAPEa~~~~-~FS~kSDVWSFGVlL~E~fT~G~~py~~msn~ev~~~le~GyRlp~--------- 425 (468)
T KOG0197|consen 357 E-YTASEGGKFPIKWTAPEALNYG-KFSSKSDVWSFGVLLWELFTYGRVPYPGMSNEEVLELLERGYRLPR--------- 425 (468)
T ss_pred c-eeecCCCCCCceecCHHHHhhC-CcccccceeehhhhHHHHhccCCCCCCCCCHHHHHHHHhccCcCCC---------
Confidence 2 222222 4669999999654 59999999999999999997 9999999999988888866433332
Q ss_pred CCcccCCCcccCCCcccccCCCCChhHhhhhccccccCCCCcCCHHHhh
Q 011138 370 NYTEFKFPQIKAHPWHKIFHKRMPPEALDLVSRLLQYSPSLRCTALEAC 418 (492)
Q Consensus 370 ~~~~~~~~~~~~~~~~~~~~~~~s~~~~~Li~~~L~~dP~~R~t~~e~l 418 (492)
+..+|+++.++++.||..+|++|||.+.+.
T Consensus 426 -------------------P~~CP~~vY~lM~~CW~~~P~~RPtF~~L~ 455 (468)
T KOG0197|consen 426 -------------------PEGCPDEVYELMKSCWHEDPEDRPTFETLR 455 (468)
T ss_pred -------------------CCCCCHHHHHHHHHHhhCCcccCCCHHHHH
Confidence 246899999999999999999999998654
No 190
>PHA03210 serine/threonine kinase US3; Provisional
Probab=100.00 E-value=9.1e-42 Score=359.49 Aligned_cols=282 Identities=20% Similarity=0.272 Sum_probs=198.6
Q ss_pred ccceeEeeeeccCCceEEEEEEEcCCCC-EEEEE------------------Eecc---chhhHHHHHHHHHHcCCCCcc
Q 011138 136 TISYMAERVVGTGSFGVVFQAKCLETGD-SVAIK------------------KVLQ---DKRYKNRELQIMRLLNHPNVV 193 (492)
Q Consensus 136 ~~~y~~~~~lG~G~fg~Vy~~~~~~~g~-~vAiK------------------~~~~---~~~~~~~E~~il~~l~h~nIv 193 (492)
..+|.+.+.||+|+||+||+|..+.... .+++| .+.. ....+.+|+.+|+.++|||||
T Consensus 147 ~~~Y~ii~~LG~G~fG~Vyl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~Ei~il~~l~HpnIv 226 (501)
T PHA03210 147 LAHFRVIDDLPAGAFGKIFICALRASTEEAEARRGVNSTNQGKPKCERLIAKRVKAGSRAAIQLENEILALGRLNHENIL 226 (501)
T ss_pred hhccEEEeEecCCCCcceEEEEEeccchhhhhhhccccccccchhhhhhHhHHhhcchHHHHHHHHHHHHHHhCCCCCcC
Confidence 3579999999999999999987643322 12222 1111 122346899999999999999
Q ss_pred ccceeeeeccCCCceEEEEEeeechhhHHHHhhhhh-hcCCCcCHHHHHHHHHHHHHHHHHHHhhCCcccCCCCCCceEE
Q 011138 194 SLKHCFFSTTEKDELYLNLVLEYISETVYRVSKHYT-RMNQHVPILYVQLYTYQICRALNYLHHVVGVCHRDIKPQNLLV 272 (492)
Q Consensus 194 ~l~~~~~~~~~~~~~~~~lV~E~~~~~l~~~~~~~~-~~~~~~~~~~~~~i~~qi~~aL~yLH~~~givHrDlKp~NILl 272 (492)
++++++. +..+.|+|++++.++++..+.... ..........++.|+.||+.||.|||+ +|||||||||+|||+
T Consensus 227 ~l~~~~~-----~~~~~~lv~e~~~~~l~~~l~~~~~~~~~~~~~~~~~~i~~ql~~aL~yLH~-~gIiHrDLKP~NILl 300 (501)
T PHA03210 227 KIEEILR-----SEANTYMITQKYDFDLYSFMYDEAFDWKDRPLLKQTRAIMKQLLCAVEYIHD-KKLIHRDIKLENIFL 300 (501)
T ss_pred cEeEEEE-----ECCeeEEEEeccccCHHHHHhhccccccccccHHHHHHHHHHHHHHHHHHHh-CCeecCCCCHHHEEE
Confidence 9999983 344588999999887776543221 112234456778899999999999997 999999999999999
Q ss_pred cCCCCcEEEeeecCccccCCCCC--CccceeccCccCchhhcCCCCCCcchhhHHHHHHHHHHHhCCCC-CCC--CChHH
Q 011138 273 NPHTHQLKICDFGSAKMLVPGEP--NISYICSRYYRAPELIFGATEYTTAIDMWSIGCVLAELLLGQPL-FPG--ESGVD 347 (492)
Q Consensus 273 ~~~~~~vkL~DFG~a~~~~~~~~--~~~~~gt~~y~aPE~~~~~~~~~~~~DvwSlGvil~ell~G~~p-f~~--~~~~~ 347 (492)
+.++ .+||+|||+++.+..... ....+||+.|+|||++.+. .++.++|||||||++|||++|..+ |.. .....
T Consensus 301 ~~~~-~vkL~DFGla~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~~DiwSlGvil~ell~~~~~p~~~~~~~~~~ 378 (501)
T PHA03210 301 NCDG-KIVLGDFGTAMPFEKEREAFDYGWVGTVATNSPEILAGD-GYCEITDIWSCGLILLDMLSHDFCPIGDGGGKPGK 378 (501)
T ss_pred CCCC-CEEEEeCCCceecCcccccccccccCCcCCCCchhhcCC-CCCcHHHHHHHHHHHHHHHHCCCCCccCCCCCHHH
Confidence 9887 799999999987643322 2346899999999999765 489999999999999999998754 432 23456
Q ss_pred HHHHHHHHhCCCCHHHHhhcC----CCCcccCCCcccCCCccc-ccCCCCChhHhhhhccccccCCCCcCCHHHhhCCCC
Q 011138 348 QLVEIIKILGTPTREEIKCMN----PNYTEFKFPQIKAHPWHK-IFHKRMPPEALDLVSRLLQYSPSLRCTALEACAHPF 422 (492)
Q Consensus 348 ~~~~i~~~~g~p~~~~~~~~~----~~~~~~~~~~~~~~~~~~-~~~~~~s~~~~~Li~~~L~~dP~~R~t~~e~l~Hp~ 422 (492)
++.+++..++.+..+ +.... .......+.... ..... .....++.++.++|.+||++||.+|||+.|+|+|||
T Consensus 379 ~~~~~~~~~~~~~~~-~p~~~~~~~~~i~~~~~~~~~-~~~~~~~~~~~~~~~~~~li~kmL~~DP~~Rpsa~elL~hp~ 456 (501)
T PHA03210 379 QLLKIIDSLSVCDEE-FPDPPCKLFDYIDSAEIDHAG-HSVPPLIRNLGLPADFEYPLVKMLTFDWHLRPGAAELLALPL 456 (501)
T ss_pred HHHHHHHhcccChhh-cCCcHHHHHHHhhhhhcccCc-cchhhHHHhcCCChHHHHHHHHHhccCcccCcCHHHHhhChh
Confidence 666666655543322 11000 000000000000 00000 011246788999999999999999999999999999
Q ss_pred CCCCC
Q 011138 423 FDDLR 427 (492)
Q Consensus 423 f~~~~ 427 (492)
|....
T Consensus 457 f~~~~ 461 (501)
T PHA03210 457 FSAEE 461 (501)
T ss_pred hhcCC
Confidence 98753
No 191
>KOG0665 consensus Jun-N-terminal kinase (JNK) [Signal transduction mechanisms]
Probab=100.00 E-value=7.7e-43 Score=325.06 Aligned_cols=281 Identities=33% Similarity=0.571 Sum_probs=228.7
Q ss_pred ceeEeeeeccCCceEEEEEEEcCCCCEEEEEEeccc------hhhHHHHHHHHHHcCCCCccccceeeeeccC-CCceEE
Q 011138 138 SYMAERVVGTGSFGVVFQAKCLETGDSVAIKKVLQD------KRYKNRELQIMRLLNHPNVVSLKHCFFSTTE-KDELYL 210 (492)
Q Consensus 138 ~y~~~~~lG~G~fg~Vy~~~~~~~g~~vAiK~~~~~------~~~~~~E~~il~~l~h~nIv~l~~~~~~~~~-~~~~~~ 210 (492)
+|.-.+.+|.|.- .|..|.|.-+++.||+|++... .+...+|..++..++|+||++++.+|..... .....+
T Consensus 18 Ry~nL~p~~~g~~-~v~~a~D~v~~~~v~ikk~~~pf~n~~~akra~rel~l~~~v~~~nii~l~n~ftP~~~l~~~~e~ 96 (369)
T KOG0665|consen 18 RYVNLKPIGSGAQ-IVVAAFDQVLGRPVAIKKLSRPFQNQTHAKRAYRELKLMKCVNHKNIISLLNVFTPQKTLEEFQEV 96 (369)
T ss_pred eeeeecccCCCCc-eEEecchhhccCceehhhhcCccccCccchhhhhhhhhhhhhcccceeeeeeccCccccHHHHHhH
Confidence 6888899999998 8888999999999999987432 3345689999999999999999999844332 222347
Q ss_pred EEEeeechhhHHHHhhhhhhcCCCcCHHHHHHHHHHHHHHHHHHHhhCCcccCCCCCCceEEcCCCCcEEEeeecCcccc
Q 011138 211 NLVLEYISETVYRVSKHYTRMNQHVPILYVQLYTYQICRALNYLHHVVGVCHRDIKPQNLLVNPHTHQLKICDFGSAKML 290 (492)
Q Consensus 211 ~lV~E~~~~~l~~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~yLH~~~givHrDlKp~NILl~~~~~~vkL~DFG~a~~~ 290 (492)
|+|||++..++...+. -.++-..+..+++|++.|++|||+ .||+||||||+||++..++ .+||.|||+|+..
T Consensus 97 y~v~e~m~~nl~~vi~------~elDH~tis~i~yq~~~~ik~lhs-~~IihRdLkPsnivv~~~~-~lKi~dfg~ar~e 168 (369)
T KOG0665|consen 97 YLVMELMDANLCQVIL------MELDHETISYILYQMLCGIKHLHS-AGIIHRDLKPSNIVVNSDC-TLKILDFGLARTE 168 (369)
T ss_pred HHHHHhhhhHHHHHHH------HhcchHHHHHHHHHHHHHHHHHHh-cceeecccCcccceecchh-heeeccchhhccc
Confidence 8999999998877654 234556788999999999999997 8999999999999999988 8999999999876
Q ss_pred CCCCCCccceeccCccCchhhcCCCCCCcchhhHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCCHHHHhhcC--
Q 011138 291 VPGEPNISYICSRYYRAPELIFGATEYTTAIDMWSIGCVLAELLLGQPLFPGESGVDQLVEIIKILGTPTREEIKCMN-- 368 (492)
Q Consensus 291 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DvwSlGvil~ell~G~~pf~~~~~~~~~~~i~~~~g~p~~~~~~~~~-- 368 (492)
...-..+.++.|++|+|||++.+.. |...+||||+||++.||++|...|.|.+..++..++...+|.|.+..+..+.
T Consensus 169 ~~~~~mtpyVvtRyyrapevil~~~-~ke~vdiwSvGci~gEli~~~Vlf~g~d~idQ~~ki~~~lgtpd~~F~~qL~~~ 247 (369)
T KOG0665|consen 169 DTDFMMTPYVVTRYYRAPEVILGMG-YKENVDIWSVGCIMGELILGTVLFPGKDHIDQWNKIIEQLGTPDPSFMKQLQPT 247 (369)
T ss_pred CcccccCchhheeeccCchheeccC-CcccchhhhhhhHHHHHhhceEEecCchHHHHHHHHHHHhcCCCHHHHHHhhHH
Confidence 5554567789999999999999877 9999999999999999999999999999999999999999999988776543
Q ss_pred --------CCCcccCCCcc-cCCCccccc--CCCCChhHhhhhccccccCCCCcCCHHHhhCCCCCCCCCC
Q 011138 369 --------PNYTEFKFPQI-KAHPWHKIF--HKRMPPEALDLVSRLLQYSPSLRCTALEACAHPFFDDLRD 428 (492)
Q Consensus 369 --------~~~~~~~~~~~-~~~~~~~~~--~~~~s~~~~~Li~~~L~~dP~~R~t~~e~l~Hp~f~~~~~ 428 (492)
+.|..+.|... +..-|.... .+.-+..++||+.+||..||++|++++++|+||||+-+-+
T Consensus 248 ~r~yv~~~~~y~~~~f~~~fpD~~f~~~~e~~~~~~~~ardll~~MLvi~pe~Risv~daL~HPY~~vw~~ 318 (369)
T KOG0665|consen 248 VRNYVENRPQYQAISFSELFPDSLFPVVLEGSKLDCSLARDLLSKMLVIDPEKRISVDDALRHPYIKVWYD 318 (369)
T ss_pred HHHHhhcChHhhccchhhhCCcccccccccCCccchHHHHHHHHHhhccChhhcccHHHHhcCCeeeeecc
Confidence 33333333321 111222111 1223457899999999999999999999999999995543
No 192
>KOG2345 consensus Serine/threonine protein kinase/TGF-beta stimulated factor [Transcription; Lipid transport and metabolism; Signal transduction mechanisms]
Probab=100.00 E-value=8.4e-43 Score=314.18 Aligned_cols=256 Identities=28% Similarity=0.388 Sum_probs=204.4
Q ss_pred ceeEeeeeccCCceEEEEEEEcCCCCEEEEEEecc----chhhHHHHHHHHHHcCCCCccccceeeeeccCCCceEEEEE
Q 011138 138 SYMAERVVGTGSFGVVFQAKCLETGDSVAIKKVLQ----DKRYKNRELQIMRLLNHPNVVSLKHCFFSTTEKDELYLNLV 213 (492)
Q Consensus 138 ~y~~~~~lG~G~fg~Vy~~~~~~~g~~vAiK~~~~----~~~~~~~E~~il~~l~h~nIv~l~~~~~~~~~~~~~~~~lV 213 (492)
+|++.+.||+|||+.||+++...++..||+|++.- +.....+|++..++++|||+++++++............||+
T Consensus 22 Ryri~~~LgeGGfsfv~LV~~~s~~~~YAlKkI~c~~~~~~e~~~rEid~~rkf~s~~vl~l~dh~l~~~~D~~~~~yll 101 (302)
T KOG2345|consen 22 RYRIQRLLGEGGFSFVDLVKGLSTGHLYALKKILCHSQEDIEEALREIDNHRKFNSPNVLRLVDHQLREEKDGKHEAYLL 101 (302)
T ss_pred eEEEeeeecCCCceeeeeecccCcccchhhheeeccchHHHHHHHHHHHHHHhhCCcchHHHHHHHHHhhccCceeEEEE
Confidence 69999999999999999999999999999999843 33445689999999999999999999877665677789999
Q ss_pred eeech-hhHHHHhhhhhhcCCCcCHHHHHHHHHHHHHHHHHHHhhCC--cccCCCCCCceEEcCCCCcEEEeeecCcccc
Q 011138 214 LEYIS-ETVYRVSKHYTRMNQHVPILYVQLYTYQICRALNYLHHVVG--VCHRDIKPQNLLVNPHTHQLKICDFGSAKML 290 (492)
Q Consensus 214 ~E~~~-~~l~~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~yLH~~~g--ivHrDlKp~NILl~~~~~~vkL~DFG~a~~~ 290 (492)
++|.. |++++.+......+..+++..+..|+.+|++||++||+ .. ++||||||.|||+...+ .++|.|||.++..
T Consensus 102 ~Pyy~~Gsl~d~i~~~k~kg~~~sE~~iL~if~gic~gL~~lH~-~~~~yAH~DiKP~NILls~~~-~~vl~D~GS~~~a 179 (302)
T KOG2345|consen 102 LPYYKRGSLLDEIERLKIKGNFVSEAQILWIFLGICRGLEALHE-KEPPYAHRDIKPANILLSDSG-LPVLMDLGSATQA 179 (302)
T ss_pred eehhccccHHHHHHHHhhcCCccCHHHHHHHHHHHHHHHHHHhc-cCCcccccCCCcceeEecCCC-ceEEEeccCcccc
Confidence 99998 55888888777777789999999999999999999997 77 99999999999999867 8999999998754
Q ss_pred CCCCC----------CccceeccCccCchhhcCC--CCCCcchhhHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCC
Q 011138 291 VPGEP----------NISYICSRYYRAPELIFGA--TEYTTAIDMWSIGCVLAELLLGQPLFPGESGVDQLVEIIKILGT 358 (492)
Q Consensus 291 ~~~~~----------~~~~~gt~~y~aPE~~~~~--~~~~~~~DvwSlGvil~ell~G~~pf~~~~~~~~~~~i~~~~g~ 358 (492)
.-.-. .....+|..|+|||++.-. ...+.++|||||||+||+|+.|..||...- ..-|.
T Consensus 180 ~i~i~~~~~a~~lQe~a~e~Ct~pyRAPELf~vk~~~ti~ertDIWSLGCtLYa~mf~~sPfe~~~---------~~GgS 250 (302)
T KOG2345|consen 180 PIQIEGSRQALRLQEWAEERCTIPYRAPELFNVKSHCTITERTDIWSLGCTLYAMMFGESPFERIY---------QQGGS 250 (302)
T ss_pred ceEeechHHHHHHHHHHHHhCCCcccCchheecccCcccccccchhhhhHHHHHHHHcCCcchHHh---------hcCCe
Confidence 21111 1134679999999998322 236889999999999999999999994311 10000
Q ss_pred CCHHHHhhcCCCCcccCCCcccCCCcccccCCCCChhHhhhhccccccCCCCcCCHHHhhCC
Q 011138 359 PTREEIKCMNPNYTEFKFPQIKAHPWHKIFHKRMPPEALDLVSRLLQYSPSLRCTALEACAH 420 (492)
Q Consensus 359 p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~Li~~~L~~dP~~R~t~~e~l~H 420 (492)
..- .-.+ ..+.+|.- ..+|+.+.+||+.||+.||.+||++.+++.+
T Consensus 251 laL---Av~n---~q~s~P~~----------~~yse~l~~lik~mlqvdP~qRP~i~~ll~~ 296 (302)
T KOG2345|consen 251 LAL---AVQN---AQISIPNS----------SRYSEALHQLIKSMLQVDPNQRPTIPELLSK 296 (302)
T ss_pred EEE---eeec---cccccCCC----------CCccHHHHHHHHHHhcCCcccCCCHHHHHHH
Confidence 000 0000 12333331 3479999999999999999999999999864
No 193
>cd06654 STKc_PAK1 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 1. Serine/threonine kinases (STKs), p21-activated kinase (PAK) 1, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK1 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding
Probab=100.00 E-value=2e-41 Score=334.08 Aligned_cols=252 Identities=26% Similarity=0.422 Sum_probs=202.8
Q ss_pred cceeEeeeeccCCceEEEEEEEcCCCCEEEEEEeccc----hhhHHHHHHHHHHcCCCCccccceeeeeccCCCceEEEE
Q 011138 137 ISYMAERVVGTGSFGVVFQAKCLETGDSVAIKKVLQD----KRYKNRELQIMRLLNHPNVVSLKHCFFSTTEKDELYLNL 212 (492)
Q Consensus 137 ~~y~~~~~lG~G~fg~Vy~~~~~~~g~~vAiK~~~~~----~~~~~~E~~il~~l~h~nIv~l~~~~~~~~~~~~~~~~l 212 (492)
.+|.+.+.||+|+||.||+|.+..+++.||+|.+... .....+|+.+++.++|+||++++++|.. ..+.|+
T Consensus 20 ~~y~~~~~lg~g~~~~v~~~~~~~~~~~v~ik~~~~~~~~~~~~~~~e~~~l~~~~h~~v~~~~~~~~~-----~~~~~l 94 (296)
T cd06654 20 KKYTRFEKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRENKNPNIVNYLDSYLV-----GDELWV 94 (296)
T ss_pred cceeeEEEecCCCCeEEEEEEECCCCcEEEEEEEecCCcchHHHHHHHHHHHHhCCCCCEeeEEEEEEe-----CCEEEE
Confidence 3699999999999999999999999999999988543 2345579999999999999999998843 346899
Q ss_pred Eeeechhh-HHHHhhhhhhcCCCcCHHHHHHHHHHHHHHHHHHHhhCCcccCCCCCCceEEcCCCCcEEEeeecCccccC
Q 011138 213 VLEYISET-VYRVSKHYTRMNQHVPILYVQLYTYQICRALNYLHHVVGVCHRDIKPQNLLVNPHTHQLKICDFGSAKMLV 291 (492)
Q Consensus 213 V~E~~~~~-l~~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~yLH~~~givHrDlKp~NILl~~~~~~vkL~DFG~a~~~~ 291 (492)
||||+.++ +...+. ...+++..+..++.||+.||.|||+ .||+||||||+|||++.++ .+||+|||++....
T Consensus 95 v~e~~~~~~L~~~~~-----~~~~~~~~~~~i~~ql~~aL~~LH~-~gi~H~dLkp~Nill~~~~-~~kl~dfg~~~~~~ 167 (296)
T cd06654 95 VMEYLAGGSLTDVVT-----ETCMDEGQIAAVCRECLQALEFLHS-NQVIHRDIKSDNILLGMDG-SVKLTDFGFCAQIT 167 (296)
T ss_pred eecccCCCCHHHHHH-----hcCCCHHHHHHHHHHHHHHHHHHHH-CCcccCCCCHHHEEEcCCC-CEEECccccchhcc
Confidence 99999865 433322 2457888899999999999999997 9999999999999999887 89999999987653
Q ss_pred CCCC-CccceeccCccCchhhcCCCCCCcchhhHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCCHHHHhhcCCC
Q 011138 292 PGEP-NISYICSRYYRAPELIFGATEYTTAIDMWSIGCVLAELLLGQPLFPGESGVDQLVEIIKILGTPTREEIKCMNPN 370 (492)
Q Consensus 292 ~~~~-~~~~~gt~~y~aPE~~~~~~~~~~~~DvwSlGvil~ell~G~~pf~~~~~~~~~~~i~~~~g~p~~~~~~~~~~~ 370 (492)
.... .....|++.|+|||.+.+. .++.++|||||||++|+|++|+.||...+....+..+... +.+.
T Consensus 168 ~~~~~~~~~~~~~~y~aPE~~~~~-~~~~~~Dv~s~Gvil~~l~~g~~pf~~~~~~~~~~~~~~~-~~~~---------- 235 (296)
T cd06654 168 PEQSKRSTMVGTPYWMAPEVVTRK-AYGPKVDIWSLGIMAIEMIEGEPPYLNENPLRALYLIATN-GTPE---------- 235 (296)
T ss_pred ccccccCcccCCccccCHHHHcCC-CCCccchHHHHHHHHHHHHhCCCCCCCCCHHHhHHHHhcC-CCCC----------
Confidence 3322 2345788999999998654 4789999999999999999999999877654443332210 0000
Q ss_pred CcccCCCcccCCCcccccCCCCChhHhhhhccccccCCCCcCCHHHhhCCCCCCCCC
Q 011138 371 YTEFKFPQIKAHPWHKIFHKRMPPEALDLVSRLLQYSPSLRCTALEACAHPFFDDLR 427 (492)
Q Consensus 371 ~~~~~~~~~~~~~~~~~~~~~~s~~~~~Li~~~L~~dP~~R~t~~e~l~Hp~f~~~~ 427 (492)
...+..++..+.+||.+||..||++||++.++++||||...+
T Consensus 236 ---------------~~~~~~~~~~l~~li~~~l~~~p~~Rpt~~eil~~~~~~~~~ 277 (296)
T cd06654 236 ---------------LQNPEKLSAIFRDFLNRCLDMDVEKRGSAKELLQHQFLKIAK 277 (296)
T ss_pred ---------------CCCccccCHHHHHHHHHHCcCCcccCcCHHHHhhChhhhccC
Confidence 001235788999999999999999999999999999998643
No 194
>cd06608 STKc_myosinIII_like Catalytic domain of Class III myosin-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), Class III myosin-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins with an N-terminal kinase catalytic domain and a C-terminal actin-binding motor domain. Class III myosins are present in the photoreceptors of invertebrates and vertebrates and in the auditory hair cells of mammals. The kinase domain of myosin III can phosphorylate several cytoskeletal proteins, conventional myosin regulatory light chains, and can autophosphorylate the C-terminal motor domain. Myosin I
Probab=100.00 E-value=2.8e-41 Score=328.06 Aligned_cols=262 Identities=28% Similarity=0.414 Sum_probs=207.3
Q ss_pred ccccceeEeeeeccCCceEEEEEEEcCCCCEEEEEEeccch---hhHHHHHHHHHHc-CCCCccccceeeeeccC-CCce
Q 011138 134 KQTISYMAERVVGTGSFGVVFQAKCLETGDSVAIKKVLQDK---RYKNRELQIMRLL-NHPNVVSLKHCFFSTTE-KDEL 208 (492)
Q Consensus 134 ~~~~~y~~~~~lG~G~fg~Vy~~~~~~~g~~vAiK~~~~~~---~~~~~E~~il~~l-~h~nIv~l~~~~~~~~~-~~~~ 208 (492)
...++|.+.+.||+|+||.||+|.+..+++.+++|++.... ....+|+.+++.+ +|+||+++++++..... .+..
T Consensus 3 ~~~~~y~~~~~l~~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~e~~~l~~~~~h~~i~~~~~~~~~~~~~~~~~ 82 (275)
T cd06608 3 DPTGIFELVEVIGEGTYGKVYKARHKKTGQLVAIKIMDIIEDEEEEIKEEYNILRKYSNHPNIATFYGAFIKKNPPGNDD 82 (275)
T ss_pred CchhheeheeeecCCCCeEEEEEEECCCCcEEEEEEEecCchhHHHHHHHHHHHHHhcCCCChheEEEEEEecCCCCcce
Confidence 44568999999999999999999999999999999885432 3456899999998 69999999999866543 3456
Q ss_pred EEEEEeeechhh-HHHHhhhhhhcCCCcCHHHHHHHHHHHHHHHHHHHhhCCcccCCCCCCceEEcCCCCcEEEeeecCc
Q 011138 209 YLNLVLEYISET-VYRVSKHYTRMNQHVPILYVQLYTYQICRALNYLHHVVGVCHRDIKPQNLLVNPHTHQLKICDFGSA 287 (492)
Q Consensus 209 ~~~lV~E~~~~~-l~~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~yLH~~~givHrDlKp~NILl~~~~~~vkL~DFG~a 287 (492)
++++||||++++ +.+++.........+++..++.++.||+.||.|||+ .||+|+||+|+||+++.++ .+||+|||++
T Consensus 83 ~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~ql~~al~~lH~-~~i~H~~l~p~ni~~~~~~-~~~l~d~~~~ 160 (275)
T cd06608 83 QLWLVMELCGGGSVTDLVKGLRKKGKRLKEEWIAYILRETLRGLAYLHE-NKVIHRDIKGQNILLTKNA-EVKLVDFGVS 160 (275)
T ss_pred EEEEEEEcCCCCcHHHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHhc-CCcccCCCCHHHEEEccCC-eEEECCCccc
Confidence 688999999964 444443333335678899999999999999999997 9999999999999999887 7999999998
Q ss_pred cccCCCC-CCccceeccCccCchhhcCC----CCCCcchhhHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCCHH
Q 011138 288 KMLVPGE-PNISYICSRYYRAPELIFGA----TEYTTAIDMWSIGCVLAELLLGQPLFPGESGVDQLVEIIKILGTPTRE 362 (492)
Q Consensus 288 ~~~~~~~-~~~~~~gt~~y~aPE~~~~~----~~~~~~~DvwSlGvil~ell~G~~pf~~~~~~~~~~~i~~~~g~p~~~ 362 (492)
....... ......|+..|+|||++... ..++.++|||||||++|+|++|.+||........+..+... +.
T Consensus 161 ~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~---~~-- 235 (275)
T cd06608 161 AQLDSTLGRRNTFIGTPYWMAPEVIACDEQPDASYDARSDVWSLGITAIELADGKPPLCDMHPMRALFKIPRN---PP-- 235 (275)
T ss_pred eecccchhhhcCccccccccCHhHhcccccccCCccccccHHHhHHHHHHHHhCCCCccccchHHHHHHhhcc---CC--
Confidence 7653322 22345789999999988532 34678999999999999999999999876555444443221 00
Q ss_pred HHhhcCCCCcccCCCcccCCCcccccCCCCChhHhhhhccccccCCCCcCCHHHhhCCCCC
Q 011138 363 EIKCMNPNYTEFKFPQIKAHPWHKIFHKRMPPEALDLVSRLLQYSPSLRCTALEACAHPFF 423 (492)
Q Consensus 363 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~Li~~~L~~dP~~R~t~~e~l~Hp~f 423 (492)
+.+. .....++++++||.+||..||++|||+.++++|||+
T Consensus 236 --------------~~~~-------~~~~~~~~~~~li~~~l~~dp~~Rpt~~~ll~~~~~ 275 (275)
T cd06608 236 --------------PTLK-------SPENWSKKFNDFISECLIKNYEQRPFMEELLEHPFI 275 (275)
T ss_pred --------------CCCC-------chhhcCHHHHHHHHHHhhcChhhCcCHHHHhcCCCC
Confidence 0000 012357899999999999999999999999999996
No 195
>cd06615 PKc_MEK Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase. Protein kinases (PKs), MAP/ERK kinase (MEK) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK1 and MEK2 are dual-specificity PKs that phosphorylate and activate the down
Probab=100.00 E-value=2.1e-41 Score=335.78 Aligned_cols=277 Identities=25% Similarity=0.387 Sum_probs=201.9
Q ss_pred ceeEeeeeccCCceEEEEEEEcCCCCEEEEEEeccch-----hhHHHHHHHHHHcCCCCccccceeeeeccCCCceEEEE
Q 011138 138 SYMAERVVGTGSFGVVFQAKCLETGDSVAIKKVLQDK-----RYKNRELQIMRLLNHPNVVSLKHCFFSTTEKDELYLNL 212 (492)
Q Consensus 138 ~y~~~~~lG~G~fg~Vy~~~~~~~g~~vAiK~~~~~~-----~~~~~E~~il~~l~h~nIv~l~~~~~~~~~~~~~~~~l 212 (492)
+|.+.+.||+|+||.||++.+..+|..+|+|.+.... ....+|+++++.++||||++++++|. +..++|+
T Consensus 2 ~~~~~~~lg~G~~g~v~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~-----~~~~~~l 76 (308)
T cd06615 2 DFEKLGELGAGNGGVVTKVLHRPSGLIMARKLIHLEIKPAIRNQIIRELKVLHECNSPYIVGFYGAFY-----SDGEISI 76 (308)
T ss_pred CceEEeeccCCCCeEEEEEEEcCCCeEEEEEEeccccCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEe-----eCCEEEE
Confidence 5899999999999999999999999999999875431 23457999999999999999999984 4446899
Q ss_pred Eeeechhh-HHHHhhhhhhcCCCcCHHHHHHHHHHHHHHHHHHHhhCCcccCCCCCCceEEcCCCCcEEEeeecCccccC
Q 011138 213 VLEYISET-VYRVSKHYTRMNQHVPILYVQLYTYQICRALNYLHHVVGVCHRDIKPQNLLVNPHTHQLKICDFGSAKMLV 291 (492)
Q Consensus 213 V~E~~~~~-l~~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~yLH~~~givHrDlKp~NILl~~~~~~vkL~DFG~a~~~~ 291 (492)
||||++++ +...+.. ...+++..+..++.||+.||.|||+..+|+||||||+|||++.++ .+||+|||++....
T Consensus 77 v~ey~~~~~L~~~l~~----~~~~~~~~~~~~~~~i~~~l~~lH~~~~i~H~dl~p~nil~~~~~-~~~l~dfg~~~~~~ 151 (308)
T cd06615 77 CMEHMDGGSLDQVLKK----AGRIPENILGKISIAVLRGLTYLREKHKIMHRDVKPSNILVNSRG-EIKLCDFGVSGQLI 151 (308)
T ss_pred EeeccCCCcHHHHHHh----cCCCCHHHHHHHHHHHHHHHHHHHhhCCEEECCCChHHEEEecCC-cEEEccCCCccccc
Confidence 99999864 4443322 356889999999999999999999635899999999999999887 79999999987553
Q ss_pred CCCCCccceeccCccCchhhcCCCCCCcchhhHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCCHHHHhhcCCCC
Q 011138 292 PGEPNISYICSRYYRAPELIFGATEYTTAIDMWSIGCVLAELLLGQPLFPGESGVDQLVEIIKILGTPTREEIKCMNPNY 371 (492)
Q Consensus 292 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DvwSlGvil~ell~G~~pf~~~~~~~~~~~i~~~~g~p~~~~~~~~~~~~ 371 (492)
.. ......|++.|+|||++.+. .++.++|+|||||++|+|++|..||...+... ...+...................
T Consensus 152 ~~-~~~~~~~~~~~~aPE~~~~~-~~~~~~DiwslG~~l~~l~~g~~p~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~ 228 (308)
T cd06615 152 DS-MANSFVGTRSYMSPERLQGT-HYTVQSDIWSLGLSLVEMAIGRYPIPPPDAKE-LEAMFGRPVSEGEAKESHRPVSG 228 (308)
T ss_pred cc-ccccCCCCcCccChhHhcCC-CCCccchHHHHHHHHHHHHhCCCCCCCcchhh-HHHhhcCccccccccCCcccccC
Confidence 22 23456789999999998654 48899999999999999999999998765322 22222111000000000000000
Q ss_pred cccCCCc----------ccCCCcccccCCCCChhHhhhhccccccCCCCcCCHHHhhCCCCCCCCC
Q 011138 372 TEFKFPQ----------IKAHPWHKIFHKRMPPEALDLVSRLLQYSPSLRCTALEACAHPFFDDLR 427 (492)
Q Consensus 372 ~~~~~~~----------~~~~~~~~~~~~~~s~~~~~Li~~~L~~dP~~R~t~~e~l~Hp~f~~~~ 427 (492)
.....+. .........-...++.++++||.+||..||++|||+.++++||||.+..
T Consensus 229 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~ll~~~~~~~~~ 294 (308)
T cd06615 229 HPPDSPRPMAIFELLDYIVNEPPPKLPSGAFSDEFQDFVDKCLKKNPKERADLKELTKHPFIKRAE 294 (308)
T ss_pred CCCCccchhhHHHHHHHHhcCCCccCcCcccCHHHHHHHHHHccCChhhCcCHHHHhcChhhhhcc
Confidence 0000000 0000000000113678899999999999999999999999999998754
No 196
>cd06644 STKc_STK10_LOK Catalytic domain of the Protein Serine/Threonine Kinase, STK10 or Lymphocyte-oriented kinase. Serine/threonine kinases (STKs), STK10 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The STK10 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Other names for STK10 include lymphocyte-oriented kinase (LOK) and Xenopus polo-like kinase kinase 1 (xPlkk1). STK10 is highly expressed in lymphocytes and is responsible in regulating leukocyte function associated antigen (LFA-1)-mediated lymphocyte adhesion. It plays a role in regulating the CD28 responsive element in T cells, and may also function as a regulator of polo-like kinase 1 (Plk1), a protein which is overexpressed in multiple tumor types.
Probab=100.00 E-value=1.7e-41 Score=333.58 Aligned_cols=257 Identities=26% Similarity=0.398 Sum_probs=203.7
Q ss_pred cceeEeeeeccCCceEEEEEEEcCCCCEEEEEEeccch----hhHHHHHHHHHHcCCCCccccceeeeeccCCCceEEEE
Q 011138 137 ISYMAERVVGTGSFGVVFQAKCLETGDSVAIKKVLQDK----RYKNRELQIMRLLNHPNVVSLKHCFFSTTEKDELYLNL 212 (492)
Q Consensus 137 ~~y~~~~~lG~G~fg~Vy~~~~~~~g~~vAiK~~~~~~----~~~~~E~~il~~l~h~nIv~l~~~~~~~~~~~~~~~~l 212 (492)
..|++.+.||.|+||.||+|.+..+++.|++|.+.... ....+|+.+++.++||||+++++++. ....+|+
T Consensus 12 ~~y~i~~~lg~g~~g~vy~~~~~~~~~~~~~k~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~-----~~~~~~l 86 (292)
T cd06644 12 EVWEIIGELGDGAFGKVYKAKNKETGALAAAKVIETKSEEELEDYMVEIEILATCNHPYIVKLLGAFY-----WDGKLWI 86 (292)
T ss_pred hhhhhhheecCCCCeEEEEEEECCCCceEEEEEeccCCHHHHHHHHHHHHHHHhCCCCcEeeeEEEEE-----eCCeEEE
Confidence 35999999999999999999999999999999985432 23456999999999999999999884 3346899
Q ss_pred EeeechhhHHHHhhhhhhcCCCcCHHHHHHHHHHHHHHHHHHHhhCCcccCCCCCCceEEcCCCCcEEEeeecCccccCC
Q 011138 213 VLEYISETVYRVSKHYTRMNQHVPILYVQLYTYQICRALNYLHHVVGVCHRDIKPQNLLVNPHTHQLKICDFGSAKMLVP 292 (492)
Q Consensus 213 V~E~~~~~l~~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~yLH~~~givHrDlKp~NILl~~~~~~vkL~DFG~a~~~~~ 292 (492)
||||++++.+.... ......+++..+..++.||+.||.|||+ +||+||||||+||+++.++ .+||+|||++.....
T Consensus 87 v~e~~~~~~l~~~~--~~~~~~l~~~~~~~~~~ql~~~l~~lH~-~~i~H~dlkp~Nili~~~~-~~kl~dfg~~~~~~~ 162 (292)
T cd06644 87 MIEFCPGGAVDAIM--LELDRGLTEPQIQVICRQMLEALQYLHS-MKIIHRDLKAGNVLLTLDG-DIKLADFGVSAKNVK 162 (292)
T ss_pred EEecCCCCcHHHHH--HhhcCCCCHHHHHHHHHHHHHHHHHHhc-CCeeecCCCcceEEEcCCC-CEEEccCccceeccc
Confidence 99999987554322 2223568889999999999999999997 9999999999999999777 799999999865422
Q ss_pred C-CCCccceeccCccCchhhcC----CCCCCcchhhHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCCHHHHhhc
Q 011138 293 G-EPNISYICSRYYRAPELIFG----ATEYTTAIDMWSIGCVLAELLLGQPLFPGESGVDQLVEIIKILGTPTREEIKCM 367 (492)
Q Consensus 293 ~-~~~~~~~gt~~y~aPE~~~~----~~~~~~~~DvwSlGvil~ell~G~~pf~~~~~~~~~~~i~~~~g~p~~~~~~~~ 367 (492)
. .......+++.|+|||++.+ ...++.++|||||||++|+|++|.+||...+....+.++... ..
T Consensus 163 ~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Dv~slG~il~el~~g~~p~~~~~~~~~~~~~~~~---~~------- 232 (292)
T cd06644 163 TLQRRDSFIGTPYWMAPEVVMCETMKDTPYDYKADIWSLGITLIEMAQIEPPHHELNPMRVLLKIAKS---EP------- 232 (292)
T ss_pred cccccceecCCccccCceeeccccccCCCCCchhhhHhHHHHHHHHhcCCCCCccccHHHHHHHHhcC---CC-------
Confidence 2 12234568899999999852 234688999999999999999999999876654444333220 00
Q ss_pred CCCCcccCCCcccCCCcccccCCCCChhHhhhhccccccCCCCcCCHHHhhCCCCCCCCCC
Q 011138 368 NPNYTEFKFPQIKAHPWHKIFHKRMPPEALDLVSRLLQYSPSLRCTALEACAHPFFDDLRD 428 (492)
Q Consensus 368 ~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~Li~~~L~~dP~~R~t~~e~l~Hp~f~~~~~ 428 (492)
+. ...+..++.++.+||.+||..||++||++.++++||||..+..
T Consensus 233 ---------~~-------~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~il~~~~~~~~~~ 277 (292)
T cd06644 233 ---------PT-------LSQPSKWSMEFRDFLKTALDKHPETRPSAAQLLEHPFVSSVTS 277 (292)
T ss_pred ---------cc-------CCCCcccCHHHHHHHHHHhcCCcccCcCHHHHhcCcccccccc
Confidence 00 0012346789999999999999999999999999999987653
No 197
>cd06655 STKc_PAK2 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 2. Serine/threonine kinases (STKs), p21-activated kinase (PAK) 2, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK2 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding
Probab=100.00 E-value=2.9e-41 Score=332.89 Aligned_cols=253 Identities=28% Similarity=0.451 Sum_probs=205.5
Q ss_pred cceeEeeeeccCCceEEEEEEEcCCCCEEEEEEeccc----hhhHHHHHHHHHHcCCCCccccceeeeeccCCCceEEEE
Q 011138 137 ISYMAERVVGTGSFGVVFQAKCLETGDSVAIKKVLQD----KRYKNRELQIMRLLNHPNVVSLKHCFFSTTEKDELYLNL 212 (492)
Q Consensus 137 ~~y~~~~~lG~G~fg~Vy~~~~~~~g~~vAiK~~~~~----~~~~~~E~~il~~l~h~nIv~l~~~~~~~~~~~~~~~~l 212 (492)
.+|.+.+.||.|+||.||+|.+..+|+.||||.+... .....+|+.+++.++||||+++++++. +...+|+
T Consensus 19 ~~y~~~~~lg~g~~g~vy~~~~~~~~~~v~iK~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~-----~~~~~~l 93 (296)
T cd06655 19 KKYTRYEKIGQGASGTVFTAIDVATGQEVAIKQINLQKQPKKELIINEILVMKELKNPNIVNFLDSFL-----VGDELFV 93 (296)
T ss_pred ceEEEEEEEecCCCeEEEEEEEcCCCcEEEEEEEecccCchHHHHHHHHHHHHhcCCCceeeeeeeEe-----cCceEEE
Confidence 3599999999999999999999999999999988532 234457999999999999999999883 4446899
Q ss_pred EeeechhhHHHHhhhhhhcCCCcCHHHHHHHHHHHHHHHHHHHhhCCcccCCCCCCceEEcCCCCcEEEeeecCccccCC
Q 011138 213 VLEYISETVYRVSKHYTRMNQHVPILYVQLYTYQICRALNYLHHVVGVCHRDIKPQNLLVNPHTHQLKICDFGSAKMLVP 292 (492)
Q Consensus 213 V~E~~~~~l~~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~yLH~~~givHrDlKp~NILl~~~~~~vkL~DFG~a~~~~~ 292 (492)
|+||+.++.+..... ...+++..+..++.|++.||.|||+ +|++||||||+||+++.++ .+||+|||++.....
T Consensus 94 v~e~~~~~~L~~~~~----~~~l~~~~~~~i~~~l~~al~~LH~-~~i~H~dL~p~Nili~~~~-~~kl~dfg~~~~~~~ 167 (296)
T cd06655 94 VMEYLAGGSLTDVVT----ETCMDEAQIAAVCRECLQALEFLHA-NQVIHRDIKSDNVLLGMDG-SVKLTDFGFCAQITP 167 (296)
T ss_pred EEEecCCCcHHHHHH----hcCCCHHHHHHHHHHHHHHHHHHHH-CCcccCCCCHHHEEECCCC-CEEEccCccchhccc
Confidence 999998765543221 2458899999999999999999997 9999999999999999877 799999999876543
Q ss_pred CCC-CccceeccCccCchhhcCCCCCCcchhhHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCCHHHHhhcCCCC
Q 011138 293 GEP-NISYICSRYYRAPELIFGATEYTTAIDMWSIGCVLAELLLGQPLFPGESGVDQLVEIIKILGTPTREEIKCMNPNY 371 (492)
Q Consensus 293 ~~~-~~~~~gt~~y~aPE~~~~~~~~~~~~DvwSlGvil~ell~G~~pf~~~~~~~~~~~i~~~~g~p~~~~~~~~~~~~ 371 (492)
... .....++..|+|||.+.+. .++.++|+|||||++|+|++|..||.+.+....+..+... +.+.
T Consensus 168 ~~~~~~~~~~~~~y~aPE~~~~~-~~~~~~Dv~slGvil~~lltg~~pf~~~~~~~~~~~~~~~-~~~~----------- 234 (296)
T cd06655 168 EQSKRSTMVGTPYWMAPEVVTRK-AYGPKVDIWSLGIMAIEMVEGEPPYLNENPLRALYLIATN-GTPE----------- 234 (296)
T ss_pred ccccCCCcCCCccccCcchhcCC-CCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhc-CCcc-----------
Confidence 322 2345688999999998654 4789999999999999999999999887765554443221 0000
Q ss_pred cccCCCcccCCCcccccCCCCChhHhhhhccccccCCCCcCCHHHhhCCCCCCCCC
Q 011138 372 TEFKFPQIKAHPWHKIFHKRMPPEALDLVSRLLQYSPSLRCTALEACAHPFFDDLR 427 (492)
Q Consensus 372 ~~~~~~~~~~~~~~~~~~~~~s~~~~~Li~~~L~~dP~~R~t~~e~l~Hp~f~~~~ 427 (492)
. ..+..+++.+.+||.+||..||.+||++.+++.||||+...
T Consensus 235 --~------------~~~~~~~~~~~~li~~~l~~dp~~Rpt~~~il~~~~~~~~~ 276 (296)
T cd06655 235 --L------------QNPEKLSPIFRDFLNRCLEMDVEKRGSAKELLQHPFLKLAK 276 (296)
T ss_pred --c------------CCcccCCHHHHHHHHHHhhcChhhCCCHHHHhhChHhhhcc
Confidence 0 01235788999999999999999999999999999998755
No 198
>cd06616 PKc_MKK4 Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 4. Protein kinases (PKs), MAP kinase kinase 4 (MKK4) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK4 is a dual-specificity PK that phosphorylates and activates
Probab=100.00 E-value=8.2e-42 Score=335.02 Aligned_cols=261 Identities=23% Similarity=0.368 Sum_probs=202.5
Q ss_pred ceeEeeeeccCCceEEEEEEEcCCCCEEEEEEeccc-----hhhHHHHHHHHHHcC-CCCccccceeeeeccCCCceEEE
Q 011138 138 SYMAERVVGTGSFGVVFQAKCLETGDSVAIKKVLQD-----KRYKNRELQIMRLLN-HPNVVSLKHCFFSTTEKDELYLN 211 (492)
Q Consensus 138 ~y~~~~~lG~G~fg~Vy~~~~~~~g~~vAiK~~~~~-----~~~~~~E~~il~~l~-h~nIv~l~~~~~~~~~~~~~~~~ 211 (492)
+|...+.||+|+||.||++.+..+|+.||||.+... .....+|+.++.++. |+||+++++++.. ....+
T Consensus 5 ~~~~~~~lg~G~~g~vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~e~~~l~~~~~~~~iv~~~~~~~~-----~~~~~ 79 (288)
T cd06616 5 DLKDLGEIGRGAFGTVNKMLHKPSGTIMAVKRIRSTVDEKEQKRLLMDLDVVMRSSDCPYIVKFYGALFR-----EGDCW 79 (288)
T ss_pred HhHHHHHhCCCCceEEEEEEECCCCCEEEEEEehhccChHHHHHHHHHHHHHHHhcCCCCEeeeeeEEec-----CCcEE
Confidence 466778899999999999999999999999988542 223457888998886 9999999998843 33478
Q ss_pred EEeeechhhHHHHhhhh-hhcCCCcCHHHHHHHHHHHHHHHHHHHhhCCcccCCCCCCceEEcCCCCcEEEeeecCcccc
Q 011138 212 LVLEYISETVYRVSKHY-TRMNQHVPILYVQLYTYQICRALNYLHHVVGVCHRDIKPQNLLVNPHTHQLKICDFGSAKML 290 (492)
Q Consensus 212 lV~E~~~~~l~~~~~~~-~~~~~~~~~~~~~~i~~qi~~aL~yLH~~~givHrDlKp~NILl~~~~~~vkL~DFG~a~~~ 290 (492)
++|||+...+..+.... ......+++..+..++.|++.||+|||+..||+||||||+|||++.++ .+||+|||++...
T Consensus 80 ~~~e~~~~~l~~l~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~lh~~~~i~H~dlkp~Nil~~~~~-~~kl~dfg~~~~~ 158 (288)
T cd06616 80 ICMELMDISLDKFYKYVYEVLKSVIPEEILGKIAVATVKALNYLKEELKIIHRDVKPSNILLDRNG-NIKLCDFGISGQL 158 (288)
T ss_pred EEEecccCCHHHHHHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHhhcCCeeccCCCHHHEEEccCC-cEEEeecchhHHh
Confidence 99999987655443321 222467899999999999999999999635999999999999999877 7999999999766
Q ss_pred CCCCCCccceeccCccCchhhcCC--CCCCcchhhHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCCHHHHhhcC
Q 011138 291 VPGEPNISYICSRYYRAPELIFGA--TEYTTAIDMWSIGCVLAELLLGQPLFPGESGVDQLVEIIKILGTPTREEIKCMN 368 (492)
Q Consensus 291 ~~~~~~~~~~gt~~y~aPE~~~~~--~~~~~~~DvwSlGvil~ell~G~~pf~~~~~~~~~~~i~~~~g~p~~~~~~~~~ 368 (492)
..........|++.|+|||++.+. ..++.++|||||||++|+|++|+.||..... ....+.+.....
T Consensus 159 ~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~--~~~~~~~~~~~~--------- 227 (288)
T cd06616 159 VDSIAKTRDAGCRPYMAPERIDPSARDGYDVRSDVWSLGITLYEVATGKFPYPKWNS--VFDQLTQVVKGD--------- 227 (288)
T ss_pred ccCCccccccCccCccCHHHhccccccCCcchhhhhHHHHHHHHHHhCCCCchhcch--HHHHHhhhcCCC---------
Confidence 544444455789999999999665 3689999999999999999999999976542 222222211100
Q ss_pred CCCcccCCCcccCCCcccccCCCCChhHhhhhccccccCCCCcCCHHHhhCCCCCCCCC
Q 011138 369 PNYTEFKFPQIKAHPWHKIFHKRMPPEALDLVSRLLQYSPSLRCTALEACAHPFFDDLR 427 (492)
Q Consensus 369 ~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~Li~~~L~~dP~~R~t~~e~l~Hp~f~~~~ 427 (492)
.+.+. ...+..++.++.+||.+||+.||.+|||+.+++.||||+...
T Consensus 228 -------~~~~~-----~~~~~~~~~~l~~li~~~l~~~p~~Rpt~~~i~~~~~~~~~~ 274 (288)
T cd06616 228 -------PPILS-----NSEEREFSPSFVNFINLCLIKDESKRPKYKELLEHPFIKDYE 274 (288)
T ss_pred -------CCcCC-----CcCCCccCHHHHHHHHHHccCChhhCcCHHHHhcChhhhchh
Confidence 01100 011134789999999999999999999999999999998754
No 199
>cd08223 STKc_Nek4 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 4. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 4 (Nek4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek4 subfamily is one of a family of 11 different Neks (Nek1-11). The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Neks are involved in the regulation of downstream processes following the activation of Cdc2, and many of their functions are cell cycle-related. They play critical roles in microtubule dynamics during ciliogenesis and mitosis. Nek4 is highly abundant in the testis. Its specific function is unknown.
Probab=100.00 E-value=5.8e-41 Score=323.04 Aligned_cols=249 Identities=27% Similarity=0.451 Sum_probs=201.0
Q ss_pred ceeEeeeeccCCceEEEEEEEcCCCCEEEEEEeccch------hhHHHHHHHHHHcCCCCccccceeeeeccCCCceEEE
Q 011138 138 SYMAERVVGTGSFGVVFQAKCLETGDSVAIKKVLQDK------RYKNRELQIMRLLNHPNVVSLKHCFFSTTEKDELYLN 211 (492)
Q Consensus 138 ~y~~~~~lG~G~fg~Vy~~~~~~~g~~vAiK~~~~~~------~~~~~E~~il~~l~h~nIv~l~~~~~~~~~~~~~~~~ 211 (492)
+|++.+.||+|+||.||++.+..+++.||+|.+..+. ....+|+++++.++|+||+++++.+. ....++|
T Consensus 1 ~y~~~~~lg~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~----~~~~~~~ 76 (257)
T cd08223 1 AYCFVRVVGKGSYGEVSLVRHRTDGKQYVIKKLNLRNASRRERKAAEQEAQLLSQLKHPNIVAYRESWE----GEDGLLY 76 (257)
T ss_pred CceEEEEecCCCCeEEEEEEEcCCCcEEEEEEEehhhcCHHHHHHHHHHHHHHHhCCCCCeeeeeeeec----CCCCEEE
Confidence 4899999999999999999999999999999885321 23457999999999999999988762 2334688
Q ss_pred EEeeechhh-HHHHhhhhhhcCCCcCHHHHHHHHHHHHHHHHHHHhhCCcccCCCCCCceEEcCCCCcEEEeeecCcccc
Q 011138 212 LVLEYISET-VYRVSKHYTRMNQHVPILYVQLYTYQICRALNYLHHVVGVCHRDIKPQNLLVNPHTHQLKICDFGSAKML 290 (492)
Q Consensus 212 lV~E~~~~~-l~~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~yLH~~~givHrDlKp~NILl~~~~~~vkL~DFG~a~~~ 290 (492)
+||||++++ +.+.+.. .....+++..++.++.||+.||.|||+ .||+||||||+||+++.++ .++|+|||++...
T Consensus 77 lv~e~~~~~~l~~~l~~--~~~~~l~~~~~~~~~~~l~~~l~~lH~-~~i~H~di~p~nil~~~~~-~~~l~df~~~~~~ 152 (257)
T cd08223 77 IVMGFCEGGDLYHKLKE--QKGKLLPENQVVEWFVQIAMALQYLHE-KHILHRDLKTQNVFLTRTN-IIKVGDLGIARVL 152 (257)
T ss_pred EEecccCCCcHHHHHHH--hcCCCCCHHHHHHHHHHHHHHHHHHHh-CCeeccCCCchhEEEecCC-cEEEecccceEEe
Confidence 999999864 4444332 123468899999999999999999997 9999999999999999877 7999999999765
Q ss_pred CCCC-CCccceeccCccCchhhcCCCCCCcchhhHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCCHHHHhhcCC
Q 011138 291 VPGE-PNISYICSRYYRAPELIFGATEYTTAIDMWSIGCVLAELLLGQPLFPGESGVDQLVEIIKILGTPTREEIKCMNP 369 (492)
Q Consensus 291 ~~~~-~~~~~~gt~~y~aPE~~~~~~~~~~~~DvwSlGvil~ell~G~~pf~~~~~~~~~~~i~~~~g~p~~~~~~~~~~ 369 (492)
.... ......+++.|+|||++.+. .++.++|||||||++|+|++|+.||...+.......+....
T Consensus 153 ~~~~~~~~~~~~~~~y~aPE~~~~~-~~~~~~Dv~slG~il~~l~~g~~~~~~~~~~~~~~~~~~~~------------- 218 (257)
T cd08223 153 ENQCDMASTLIGTPYYMSPELFSNK-PYNYKSDVWALGCCVYEMATLKHAFNAKDMNSLVYRIIEGK------------- 218 (257)
T ss_pred cccCCccccccCCcCccChhHhcCC-CCCchhhhHHHHHHHHHHHcCCCCCCCCCHHHHHHHHHhcC-------------
Confidence 3322 22345689999999998654 48899999999999999999999998776554444433210
Q ss_pred CCcccCCCcccCCCcccccCCCCChhHhhhhccccccCCCCcCCHHHhhCCCCC
Q 011138 370 NYTEFKFPQIKAHPWHKIFHKRMPPEALDLVSRLLQYSPSLRCTALEACAHPFF 423 (492)
Q Consensus 370 ~~~~~~~~~~~~~~~~~~~~~~~s~~~~~Li~~~L~~dP~~R~t~~e~l~Hp~f 423 (492)
.+. .+..+++++.+||.+||+.||.+||++.+++.||||
T Consensus 219 ------~~~---------~~~~~~~~~~~li~~~l~~~p~~Rp~~~~~l~~~~~ 257 (257)
T cd08223 219 ------LPP---------MPKDYSPELGELIATMLSKRPEKRPSVKSILRQPYI 257 (257)
T ss_pred ------CCC---------CccccCHHHHHHHHHHhccCcccCCCHHHHhcCCCC
Confidence 010 123478899999999999999999999999999997
No 200
>cd07838 STKc_CDK4_6_like Catalytic domain of Cyclin-Dependent protein Kinase 4 and 6-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 4 (CDK4) and CDK6-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK4/6-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK4 and CDK6 partner with D-type cyclins to regulate the early G1 phase of the cell cycle. They are the first kinase activated by mitogenic signals to release cells from the G0 arrested state. CDK4 and CDK6 are both
Probab=100.00 E-value=5.4e-41 Score=328.46 Aligned_cols=278 Identities=35% Similarity=0.605 Sum_probs=216.6
Q ss_pred eeEeeeeccCCceEEEEEEEcCCCCEEEEEEeccch------hhHHHHHHHHHHc---CCCCccccceeeeeccCCCceE
Q 011138 139 YMAERVVGTGSFGVVFQAKCLETGDSVAIKKVLQDK------RYKNRELQIMRLL---NHPNVVSLKHCFFSTTEKDELY 209 (492)
Q Consensus 139 y~~~~~lG~G~fg~Vy~~~~~~~g~~vAiK~~~~~~------~~~~~E~~il~~l---~h~nIv~l~~~~~~~~~~~~~~ 209 (492)
|.+.+.||+|+||.||+|++..+++.||+|.+.... ....+|+.+++.+ +|+||+++++++..........
T Consensus 1 y~~~~~l~~g~~~~v~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~h~~i~~~~~~~~~~~~~~~~~ 80 (287)
T cd07838 1 YEELAEIGEGAYGTVYKARDLNTGRFVALKKVRVPLSEEGIPLSTLREIALLKQLESFEHPNIVRLLDVCHGPRTDRELK 80 (287)
T ss_pred CeEEEEecccCceEEEEEEECCCCCEEEEEEeccccccchhhhhHHHHHHHHHHhhccCCCCcceEEEEEeeccCCCCce
Confidence 678899999999999999998899999999885321 2234687777766 5999999999986655444456
Q ss_pred EEEEeeechhhHHHHhhhhhhcCCCcCHHHHHHHHHHHHHHHHHHHhhCCcccCCCCCCceEEcCCCCcEEEeeecCccc
Q 011138 210 LNLVLEYISETVYRVSKHYTRMNQHVPILYVQLYTYQICRALNYLHHVVGVCHRDIKPQNLLVNPHTHQLKICDFGSAKM 289 (492)
Q Consensus 210 ~~lV~E~~~~~l~~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~yLH~~~givHrDlKp~NILl~~~~~~vkL~DFG~a~~ 289 (492)
++++|||+.+.+...+.... ...+++..++.++.||+.||.|||+ .||+|+||+|+||+++.++ .+||+|||++..
T Consensus 81 ~~l~~e~~~~~l~~~l~~~~--~~~l~~~~~~~~~~~i~~al~~LH~-~~i~h~~l~~~nili~~~~-~~~l~dfg~~~~ 156 (287)
T cd07838 81 LTLVFEHVDQDLATYLSKCP--KPGLPPETIKDLMRQLLRGVDFLHS-HRIVHRDLKPQNILVTSDG-QVKIADFGLARI 156 (287)
T ss_pred eEEEehhcccCHHHHHHHcc--CCCCCHHHHHHHHHHHHHHHHHHHH-CCeeeccCChhhEEEccCC-CEEEeccCccee
Confidence 89999999987766544321 2358899999999999999999997 8999999999999999887 899999999977
Q ss_pred cCCCCCCccceeccCccCchhhcCCCCCCcchhhHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCCHHHHhhcCC
Q 011138 290 LVPGEPNISYICSRYYRAPELIFGATEYTTAIDMWSIGCVLAELLLGQPLFPGESGVDQLVEIIKILGTPTREEIKCMNP 369 (492)
Q Consensus 290 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DvwSlGvil~ell~G~~pf~~~~~~~~~~~i~~~~g~p~~~~~~~~~~ 369 (492)
...........++..|+|||++.+. .++.++|+|||||++|+|++|.+||.+.+..+.+..+....+.+....+.....
T Consensus 157 ~~~~~~~~~~~~~~~~~~PE~~~~~-~~~~~~Di~s~G~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 235 (287)
T cd07838 157 YSFEMALTSVVVTLWYRAPEVLLQS-SYATPVDMWSVGCIFAELFRRRPLFRGTSEADQLDKIFDVIGLPSEEEWPRNVS 235 (287)
T ss_pred ccCCcccccccccccccChHHhccC-CCCCcchhhhHHHHHHHHHhCCCcccCCChHHHHHHHHHHcCCCChHhcCCCcc
Confidence 6544444455688999999999765 488999999999999999999999999998888888888776655433321110
Q ss_pred CCcccCCCcccCCCcccccCCCCChhHhhhhccccccCCCCcCCHHHhhCCCCC
Q 011138 370 NYTEFKFPQIKAHPWHKIFHKRMPPEALDLVSRLLQYSPSLRCTALEACAHPFF 423 (492)
Q Consensus 370 ~~~~~~~~~~~~~~~~~~~~~~~s~~~~~Li~~~L~~dP~~R~t~~e~l~Hp~f 423 (492)
.....++......+ ....+.+++.+.+||.+||+.||.+||++.++++||||
T Consensus 236 -~~~~~~~~~~~~~~-~~~~~~~~~~~~~li~~~l~~dp~~Rp~~~~il~~~~~ 287 (287)
T cd07838 236 -LPRSSFPSYTPRSF-KSFVPEICEEGLDLLKKMLTFNPHKRISAFEALQHPYF 287 (287)
T ss_pred -cchhhcccccccch-hhhhhhhhHHHHHHHHHHhccCCccCCCHHHHhcCcCC
Confidence 00111111111111 11223567889999999999999999999999999998
No 201
>cd06630 STKc_MEKK1 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 1. Serine/threonine kinases (STKs), MAP/ERK kinase kinase 1 (MEKK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK1 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. MEKK1 activates the extracellular signal-regulated kinase 1/2 (ERK1/2) and c-Jun N-terminal kinase (JNK) pathways by activating their
Probab=100.00 E-value=2.1e-41 Score=328.21 Aligned_cols=252 Identities=28% Similarity=0.482 Sum_probs=200.1
Q ss_pred ceeEeeeeccCCceEEEEEEEcCCCCEEEEEEeccch----------hhHHHHHHHHHHcCCCCccccceeeeeccCCCc
Q 011138 138 SYMAERVVGTGSFGVVFQAKCLETGDSVAIKKVLQDK----------RYKNRELQIMRLLNHPNVVSLKHCFFSTTEKDE 207 (492)
Q Consensus 138 ~y~~~~~lG~G~fg~Vy~~~~~~~g~~vAiK~~~~~~----------~~~~~E~~il~~l~h~nIv~l~~~~~~~~~~~~ 207 (492)
+|..++.||+|+||.||++.+..+++.||+|.+.... ..+.+|+.+++.++|+||+++++++ .+.
T Consensus 1 ~~~~~~~lg~g~~~~v~~~~~~~~~~~~alk~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~-----~~~ 75 (268)
T cd06630 1 EWLKGQQLGTGAFSSCYQARDVKTGTLMAVKQVTYVRNTSSEQEEVVEALRKEIRLMARLNHPHIIRMLGAT-----CED 75 (268)
T ss_pred CccccceecCcCceEEEEEEEcCCCcEEEEEEeecccCCchhHHHHHHHHHHHHHHHHHcCCCceehhhcee-----ccC
Confidence 3788899999999999999999999999999885322 3445799999999999999999998 444
Q ss_pred eEEEEEeeechhhHH-HHhhhhhhcCCCcCHHHHHHHHHHHHHHHHHHHhhCCcccCCCCCCceEEcCCCCcEEEeeecC
Q 011138 208 LYLNLVLEYISETVY-RVSKHYTRMNQHVPILYVQLYTYQICRALNYLHHVVGVCHRDIKPQNLLVNPHTHQLKICDFGS 286 (492)
Q Consensus 208 ~~~~lV~E~~~~~l~-~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~yLH~~~givHrDlKp~NILl~~~~~~vkL~DFG~ 286 (492)
..+++||||+.++.+ +.+. ....+++..+..++.||+.||.|||+ +||+|+||||+||+++.++..+||+|||.
T Consensus 76 ~~~~~v~e~~~~~~L~~~l~----~~~~~~~~~~~~~~~ql~~al~~LH~-~~i~H~~i~~~nil~~~~~~~~~l~dfg~ 150 (268)
T cd06630 76 SHFNLFVEWMAGGSVSHLLS----KYGAFKEAVIINYTEQLLRGLSYLHE-NQIIHRDVKGANLLIDSTGQRLRIADFGA 150 (268)
T ss_pred CeEEEEEeccCCCcHHHHHH----HhCCCCHHHHHHHHHHHHHHHHHHHh-CCeecCCCCHHHEEEcCCCCEEEEccccc
Confidence 568899999997544 3332 23568889999999999999999997 99999999999999987765799999999
Q ss_pred ccccCCCC-----CCccceeccCccCchhhcCCCCCCcchhhHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCCH
Q 011138 287 AKMLVPGE-----PNISYICSRYYRAPELIFGATEYTTAIDMWSIGCVLAELLLGQPLFPGESGVDQLVEIIKILGTPTR 361 (492)
Q Consensus 287 a~~~~~~~-----~~~~~~gt~~y~aPE~~~~~~~~~~~~DvwSlGvil~ell~G~~pf~~~~~~~~~~~i~~~~g~p~~ 361 (492)
+....... ......++..|+|||.+.+. .++.++|+||+||++|+|++|..||...........+......
T Consensus 151 ~~~~~~~~~~~~~~~~~~~~~~~~~~PE~~~~~-~~~~~~Dv~slG~~l~~l~~g~~p~~~~~~~~~~~~~~~~~~~--- 226 (268)
T cd06630 151 AARLAAKGTGAGEFQGQLLGTIAFMAPEVLRGE-QYGRSCDVWSVGCVIIEMATAKPPWNAEKHSNHLALIFKIASA--- 226 (268)
T ss_pred ccccccccccCCccccccccccceeCHhHhccC-CCCcccchHHHHHHHHHHHhCCCCCCCCCCcchHHHHHHHhcc---
Confidence 87654321 12234678999999998654 4889999999999999999999999765443333222221000
Q ss_pred HHHhhcCCCCcccCCCcccCCCcccccCCCCChhHhhhhccccccCCCCcCCHHHhhCCCCCC
Q 011138 362 EEIKCMNPNYTEFKFPQIKAHPWHKIFHKRMPPEALDLVSRLLQYSPSLRCTALEACAHPFFD 424 (492)
Q Consensus 362 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~Li~~~L~~dP~~R~t~~e~l~Hp~f~ 424 (492)
.. ...++..+++++.++|.+||..||.+||++.++++||||+
T Consensus 227 ------------~~---------~~~~~~~~~~~~~~~i~~~l~~~p~~R~~~~~ll~~~~~~ 268 (268)
T cd06630 227 ------------TT---------APSIPEHLSPGLRDVTLRCLELQPEDRPPSRELLKHPVFR 268 (268)
T ss_pred ------------CC---------CCCCchhhCHHHHHHHHHHcCCCcccCcCHHHHhcCcccC
Confidence 00 0012235788999999999999999999999999999995
No 202
>cd06610 STKc_OSR1_SPAK Catalytic domain of the Protein Serine/Threonine Kinases, Oxidative stress response kinase and Ste20-related proline alanine-rich kinase. Serine/threonine kinases (STKs), oxidative stress response kinase (OSR1) and Ste20-related proline alanine-rich kinase (SPAK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The OSR1 and SPAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. SPAK is also referred to as STK39 or PASK (proline-alanine-rich STE20-related kinase). OSR1 and SPAK regulate the activity of cation-chloride cotransporters through direct interaction and phosphorylation. They are also implicated in cytoskeletal rearrangement, cell differentiation, transformation and proliferation. OSR1
Probab=100.00 E-value=2.1e-41 Score=327.58 Aligned_cols=256 Identities=28% Similarity=0.380 Sum_probs=203.6
Q ss_pred ceeEeeeeccCCceEEEEEEEcCCCCEEEEEEeccc-----hhhHHHHHHHHHHcCCCCccccceeeeeccCCCceEEEE
Q 011138 138 SYMAERVVGTGSFGVVFQAKCLETGDSVAIKKVLQD-----KRYKNRELQIMRLLNHPNVVSLKHCFFSTTEKDELYLNL 212 (492)
Q Consensus 138 ~y~~~~~lG~G~fg~Vy~~~~~~~g~~vAiK~~~~~-----~~~~~~E~~il~~l~h~nIv~l~~~~~~~~~~~~~~~~l 212 (492)
+|.+.+.||.|+||+||+|.+..++..+|+|++... .....+|+.+++.++|+||+++++.+ ......++
T Consensus 2 ~y~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~-----~~~~~~~i 76 (267)
T cd06610 2 DYELIEVIGVGATAVVYAAICLPNNEKVAIKRIDLEKCQTSVDELRKEVQAMSQCNHPNVVKYYTSF-----VVGDELWL 76 (267)
T ss_pred cceeeeeecCCCCeEEEEEEEcCCCcEEEEEEeccCCcchHHHHHHHHHHHHHhcCCCCEEEEEEEE-----eeCCEEEE
Confidence 589999999999999999999999999999988543 23456899999999999999999887 33446889
Q ss_pred EeeechhhHHHHhhhhhhcCCCcCHHHHHHHHHHHHHHHHHHHhhCCcccCCCCCCceEEcCCCCcEEEeeecCccccCC
Q 011138 213 VLEYISETVYRVSKHYTRMNQHVPILYVQLYTYQICRALNYLHHVVGVCHRDIKPQNLLVNPHTHQLKICDFGSAKMLVP 292 (492)
Q Consensus 213 V~E~~~~~l~~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~yLH~~~givHrDlKp~NILl~~~~~~vkL~DFG~a~~~~~ 292 (492)
|||++.++.+............+++..+..++.||+.||.|||+ .||+||||||+||+++.++ .++|+|||++.....
T Consensus 77 v~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~ql~~al~~lh~-~~i~h~~l~p~ni~~~~~~-~~~l~df~~~~~~~~ 154 (267)
T cd06610 77 VMPYLSGGSLLDIMKSSYPRGGLDEAIIATVLKEVLKGLEYLHS-NGQIHRDIKAGNILLGEDG-SVKIADFGVSASLAD 154 (267)
T ss_pred EEeccCCCcHHHHHHHhcccCCCCHHHHHHHHHHHHHHHHHHHh-CCeecCCCCHHhEEEcCCC-CEEEcccchHHHhcc
Confidence 99999865443222222223568899999999999999999997 9999999999999999887 799999999876643
Q ss_pred CCC-----CccceeccCccCchhhcCCCCCCcchhhHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCCHHHHhhc
Q 011138 293 GEP-----NISYICSRYYRAPELIFGATEYTTAIDMWSIGCVLAELLLGQPLFPGESGVDQLVEIIKILGTPTREEIKCM 367 (492)
Q Consensus 293 ~~~-----~~~~~gt~~y~aPE~~~~~~~~~~~~DvwSlGvil~ell~G~~pf~~~~~~~~~~~i~~~~g~p~~~~~~~~ 367 (492)
... .....|+..|+|||++.....++.++|+|||||++|+|++|+.||...+....+.++... .+
T Consensus 155 ~~~~~~~~~~~~~~~~~y~~Pe~~~~~~~~~~~~Dv~slG~i~~~l~~g~~p~~~~~~~~~~~~~~~~---~~------- 224 (267)
T cd06610 155 GGDRTRKVRKTFVGTPCWMAPEVMEQVHGYDFKADIWSFGITAIELATGAAPYSKYPPMKVLMLTLQN---DP------- 224 (267)
T ss_pred CccccccccccccCChhhcChHHHccccCcCcccchHhHhHHHHHHHhCCCCccccChhhhHHHHhcC---CC-------
Confidence 322 234568999999999876646899999999999999999999999877665544443321 00
Q ss_pred CCCCcccCCCcccCCCcccccCCCCChhHhhhhccccccCCCCcCCHHHhhCCCCC
Q 011138 368 NPNYTEFKFPQIKAHPWHKIFHKRMPPEALDLVSRLLQYSPSLRCTALEACAHPFF 423 (492)
Q Consensus 368 ~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~Li~~~L~~dP~~R~t~~e~l~Hp~f 423 (492)
. .++.. .....+++++.+||.+||..||++||++.+++.||||
T Consensus 225 ----~--~~~~~-------~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~ll~~p~~ 267 (267)
T cd06610 225 ----P--SLETG-------ADYKKYSKSFRKMISLCLQKDPSKRPTAEELLKHKFF 267 (267)
T ss_pred ----C--CcCCc-------cccccccHHHHHHHHHHcCCChhhCcCHHHHhhCCCC
Confidence 0 00000 0013578999999999999999999999999999998
No 203
>cd06609 STKc_MST3_like Catalytic domain of Mammalian Ste20-like protein kinase 3-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 3 (MST3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MST3, MST4, STK25, Schizosaccharomyces pombe Nak1 and Sid1, Saccharomyces cerevisiae sporulation-specific protein 1 (SPS1), and related proteins. Nak1 is required by fission yeast for polarizing the tips of actin cytoskeleton and is involved in cell growth, cell separation, cell morphology and cell-cycle progression. Sid1 is a component in the septation initiation network (SIN)
Probab=100.00 E-value=2e-41 Score=329.86 Aligned_cols=250 Identities=26% Similarity=0.409 Sum_probs=203.7
Q ss_pred ceeEeeeeccCCceEEEEEEEcCCCCEEEEEEeccch-----hhHHHHHHHHHHcCCCCccccceeeeeccCCCceEEEE
Q 011138 138 SYMAERVVGTGSFGVVFQAKCLETGDSVAIKKVLQDK-----RYKNRELQIMRLLNHPNVVSLKHCFFSTTEKDELYLNL 212 (492)
Q Consensus 138 ~y~~~~~lG~G~fg~Vy~~~~~~~g~~vAiK~~~~~~-----~~~~~E~~il~~l~h~nIv~l~~~~~~~~~~~~~~~~l 212 (492)
+|.+.+.||.|+||.||+|.+..+++.||+|.+..+. ....+|+.+++.++|+||+++++++. +..++|+
T Consensus 2 ~y~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~-----~~~~~~~ 76 (274)
T cd06609 2 LFTLLECIGKGSFGEVYKAIDKRTNQVVAIKVIDLEEAEDEIEDIQQEIQFLSQCRSPYITKYYGSFL-----KGSKLWI 76 (274)
T ss_pred hhhhhhhhcCCCCeEEEEEEECCCCeEEEEEEeeccccchHHHHHHHHHHHHHHcCCCCeeeeeEEEE-----ECCeEEE
Confidence 5888999999999999999999999999999885432 23567999999999999999999884 3356899
Q ss_pred Eeeechhh-HHHHhhhhhhcCCCcCHHHHHHHHHHHHHHHHHHHhhCCcccCCCCCCceEEcCCCCcEEEeeecCccccC
Q 011138 213 VLEYISET-VYRVSKHYTRMNQHVPILYVQLYTYQICRALNYLHHVVGVCHRDIKPQNLLVNPHTHQLKICDFGSAKMLV 291 (492)
Q Consensus 213 V~E~~~~~-l~~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~yLH~~~givHrDlKp~NILl~~~~~~vkL~DFG~a~~~~ 291 (492)
|+||+.++ +.+.+.. ..+++..+..++.||+.||.|||+ +||+||||+|+||+++.++ .++|+|||+++...
T Consensus 77 v~e~~~~~~L~~~~~~-----~~~~~~~~~~~~~ql~~~l~~lh~-~~i~h~dl~p~ni~i~~~~-~~~l~d~g~~~~~~ 149 (274)
T cd06609 77 IMEYCGGGSCLDLLKP-----GKLDETYIAFILREVLLGLEYLHE-EGKIHRDIKAANILLSEEG-DVKLADFGVSGQLT 149 (274)
T ss_pred EEEeeCCCcHHHHHhh-----cCCCHHHHHHHHHHHHHHHHHHHh-CCcccCCCCHHHEEECCCC-CEEEcccccceeec
Confidence 99999875 4433321 278899999999999999999997 9999999999999999887 79999999998764
Q ss_pred CC-CCCccceeccCccCchhhcCCCCCCcchhhHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCCHHHHhhcCCC
Q 011138 292 PG-EPNISYICSRYYRAPELIFGATEYTTAIDMWSIGCVLAELLLGQPLFPGESGVDQLVEIIKILGTPTREEIKCMNPN 370 (492)
Q Consensus 292 ~~-~~~~~~~gt~~y~aPE~~~~~~~~~~~~DvwSlGvil~ell~G~~pf~~~~~~~~~~~i~~~~g~p~~~~~~~~~~~ 370 (492)
.. .......+++.|+|||.+.+.. ++.++|||||||++|+|++|..||...+.......+...
T Consensus 150 ~~~~~~~~~~~~~~y~~PE~~~~~~-~~~~sDv~slG~il~~l~tg~~p~~~~~~~~~~~~~~~~--------------- 213 (274)
T cd06609 150 STMSKRNTFVGTPFWMAPEVIKQSG-YDEKADIWSLGITAIELAKGEPPLSDLHPMRVLFLIPKN--------------- 213 (274)
T ss_pred ccccccccccCCccccChhhhccCC-CCchhhHHHHHHHHHHHHhCCCCcccCchHHHHHHhhhc---------------
Confidence 43 2233567889999999996654 899999999999999999999999876644433333221
Q ss_pred CcccCCCcccCCCcccccCCC-CChhHhhhhccccccCCCCcCCHHHhhCCCCCCCCCC
Q 011138 371 YTEFKFPQIKAHPWHKIFHKR-MPPEALDLVSRLLQYSPSLRCTALEACAHPFFDDLRD 428 (492)
Q Consensus 371 ~~~~~~~~~~~~~~~~~~~~~-~s~~~~~Li~~~L~~dP~~R~t~~e~l~Hp~f~~~~~ 428 (492)
..+. +... +++++.++|.+||..||++|||+.++++||||+....
T Consensus 214 ----~~~~---------~~~~~~~~~~~~~l~~~l~~~p~~Rpt~~~il~~~~~~~~~~ 259 (274)
T cd06609 214 ----NPPS---------LEGNKFSKPFKDFVSLCLNKDPKERPSAKELLKHKFIKKAKK 259 (274)
T ss_pred ----CCCC---------CcccccCHHHHHHHHHHhhCChhhCcCHHHHhhChhhcCCCc
Confidence 0000 1112 6888999999999999999999999999999987543
No 204
>cd06643 STKc_SLK Catalytic domain of the Protein Serine/Threonine Kinase, Ste20-like kinase. Serine/threonine kinases (STKs), Ste20-like kinase (SLK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SLK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. SLK promotes apoptosis through apoptosis signal-regulating kinase 1 (ASK1) and the mitogen-activated protein kinase (MAPK) p38. It acts as a MAPK kinase kinase (MAPKKK) by phosphorylating ASK1, resulting in the phosphorylation of p38. SLK also plays a role in mediating actin reorganization. It is part of a microtubule-associated complex that is targeted at adhesion sites, and is required in focal adhesion turnover and in regulating cell migration.
Probab=100.00 E-value=2.1e-41 Score=331.27 Aligned_cols=253 Identities=26% Similarity=0.374 Sum_probs=203.0
Q ss_pred eeEeeeeccCCceEEEEEEEcCCCCEEEEEEeccch----hhHHHHHHHHHHcCCCCccccceeeeeccCCCceEEEEEe
Q 011138 139 YMAERVVGTGSFGVVFQAKCLETGDSVAIKKVLQDK----RYKNRELQIMRLLNHPNVVSLKHCFFSTTEKDELYLNLVL 214 (492)
Q Consensus 139 y~~~~~lG~G~fg~Vy~~~~~~~g~~vAiK~~~~~~----~~~~~E~~il~~l~h~nIv~l~~~~~~~~~~~~~~~~lV~ 214 (492)
|++.+.||+|+||.||+|.+..++..+++|.+.... ....+|+++++.++||||+++++++. ...+.++||
T Consensus 7 ~~i~~~lg~g~~g~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~e~~~l~~l~h~~ii~~~~~~~-----~~~~~~~v~ 81 (282)
T cd06643 7 WEIIGELGDGAFGKVYKAQNKETGVLAAAKVIDTKSEEELEDYMVEIDILASCDHPNIVKLLDAFY-----YENNLWILI 81 (282)
T ss_pred HHHHhhcccCCCeEEEEEEECCCCeEEEEEEeCCCCHHHHHHHHHHHHHHHHCCCCCeeeEEEEEe-----eCCEEEEEE
Confidence 788889999999999999999999999999885422 23457999999999999999999884 334688999
Q ss_pred eechhhHHHHhhhhhhcCCCcCHHHHHHHHHHHHHHHHHHHhhCCcccCCCCCCceEEcCCCCcEEEeeecCccccCCCC
Q 011138 215 EYISETVYRVSKHYTRMNQHVPILYVQLYTYQICRALNYLHHVVGVCHRDIKPQNLLVNPHTHQLKICDFGSAKMLVPGE 294 (492)
Q Consensus 215 E~~~~~l~~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~yLH~~~givHrDlKp~NILl~~~~~~vkL~DFG~a~~~~~~~ 294 (492)
||++++.+..... .....+++..+..++.||+.||.|||+ .||+||||||+|||++.++ .+||+|||++.......
T Consensus 82 e~~~~~~l~~~~~--~~~~~l~~~~~~~~~~qi~~~L~~LH~-~~i~H~dlkp~nili~~~~-~~kl~dfg~~~~~~~~~ 157 (282)
T cd06643 82 EFCAGGAVDAVML--ELERPLTEPQIRVVCKQTLEALNYLHE-NKIIHRDLKAGNILFTLDG-DIKLADFGVSAKNTRTI 157 (282)
T ss_pred EecCCCcHHHHHH--hcCCCCCHHHHHHHHHHHHHHHHHHHH-CCeeecCCCcccEEEccCC-CEEEccccccccccccc
Confidence 9999765543221 223568899999999999999999997 9999999999999999887 79999999986543221
Q ss_pred -CCccceeccCccCchhhc----CCCCCCcchhhHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCCHHHHhhcCC
Q 011138 295 -PNISYICSRYYRAPELIF----GATEYTTAIDMWSIGCVLAELLLGQPLFPGESGVDQLVEIIKILGTPTREEIKCMNP 369 (492)
Q Consensus 295 -~~~~~~gt~~y~aPE~~~----~~~~~~~~~DvwSlGvil~ell~G~~pf~~~~~~~~~~~i~~~~g~p~~~~~~~~~~ 369 (492)
......+++.|+|||++. ....++.++|||||||++|+|++|.+||...+..+....+..... +
T Consensus 158 ~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Dv~slGvil~el~~g~~p~~~~~~~~~~~~~~~~~~--~--------- 226 (282)
T cd06643 158 QRRDSFIGTPYWMAPEVVMCETSKDRPYDYKADVWSLGITLIEMAQIEPPHHELNPMRVLLKIAKSEP--P--------- 226 (282)
T ss_pred cccccccccccccCHhhccccCCCCCCCCccchhhhHHHHHHHHccCCCCccccCHHHHHHHHhhcCC--C---------
Confidence 223457899999999984 233477899999999999999999999988776655555433110 0
Q ss_pred CCcccCCCcccCCCcccccCCCCChhHhhhhccccccCCCCcCCHHHhhCCCCCCCC
Q 011138 370 NYTEFKFPQIKAHPWHKIFHKRMPPEALDLVSRLLQYSPSLRCTALEACAHPFFDDL 426 (492)
Q Consensus 370 ~~~~~~~~~~~~~~~~~~~~~~~s~~~~~Li~~~L~~dP~~R~t~~e~l~Hp~f~~~ 426 (492)
.. ..+..++.++++||.+||..||.+||++.++++||||...
T Consensus 227 ---~~------------~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~il~~~~~~~~ 268 (282)
T cd06643 227 ---TL------------AQPSRWSSEFKDFLKKCLEKNVDARWTTTQLLQHPFVTVN 268 (282)
T ss_pred ---CC------------CCccccCHHHHHHHHHHccCChhhCcCHHHHhcCCCEecc
Confidence 00 0123468899999999999999999999999999999864
No 205
>KOG0664 consensus Nemo-like MAPK-related serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=1.8e-43 Score=322.02 Aligned_cols=281 Identities=34% Similarity=0.566 Sum_probs=222.4
Q ss_pred EeeeeccCCceEEEEEEEcCCCCEEEEEEeccc------hhhHHHHHHHHHHcCCCCccccceeeeeccCCCceEEEEEe
Q 011138 141 AERVVGTGSFGVVFQAKCLETGDSVAIKKVLQD------KRYKNRELQIMRLLNHPNVVSLKHCFFSTTEKDELYLNLVL 214 (492)
Q Consensus 141 ~~~~lG~G~fg~Vy~~~~~~~g~~vAiK~~~~~------~~~~~~E~~il~~l~h~nIv~l~~~~~~~~~~~~~~~~lV~ 214 (492)
-.+-||-|+||+||.+.|..+|+.||+|++..- ....-+|+.+|..++|.|++..++......-.--..+|+|+
T Consensus 57 PDRPIGYGAFGVVWsVTDPRdgrrvalkK~pnvfq~L~s~krvFre~kmLcfFkHdNVLSaLDILQPph~dfFqEiYV~T 136 (449)
T KOG0664|consen 57 PDRPIGYGAFGVVWSVTDPRSGKRVALKKMPNVFQNLASCKRVFREIKMLSSFRHDNVLSLLDILQPANPSFFQELYVLT 136 (449)
T ss_pred CCCcccccceeEEEeccCCCCccchhHhhcchHHHHHHHHHHHHHHHHHHHhhccccHHHHHHhcCCCCchHHHHHHHHH
Confidence 345699999999999999999999999988432 22334799999999999999998875322211011256788
Q ss_pred eechhhHHHHhhhhhhcCCCcCHHHHHHHHHHHHHHHHHHHhhCCcccCCCCCCceEEcCCCCcEEEeeecCccccCCCC
Q 011138 215 EYISETVYRVSKHYTRMNQHVPILYVQLYTYQICRALNYLHHVVGVCHRDIKPQNLLVNPHTHQLKICDFGSAKMLVPGE 294 (492)
Q Consensus 215 E~~~~~l~~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~yLH~~~givHrDlKp~NILl~~~~~~vkL~DFG~a~~~~~~~ 294 (492)
|++..++..++- ..+.++...++.+++||++||+|||+ .||.||||||.|+|++++. .+||||||+|+....++
T Consensus 137 ELmQSDLHKIIV----SPQ~Ls~DHvKVFlYQILRGLKYLHs-A~ILHRDIKPGNLLVNSNC-vLKICDFGLARvee~d~ 210 (449)
T KOG0664|consen 137 ELMQSDLHKIIV----SPQALTPDHVKVFVYQILRGLKYLHT-ANILHRDIKPGNLLVNSNC-ILKICDFGLARTWDQRD 210 (449)
T ss_pred HHHHhhhhheec----cCCCCCcchhhhhHHHHHhhhHHHhh-cchhhccCCCccEEeccCc-eEEecccccccccchhh
Confidence 888877765543 35778889999999999999999997 8999999999999999998 89999999998764443
Q ss_pred C--CccceeccCccCchhhcCCCCCCcchhhHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCCHHHHhhcCCCCc
Q 011138 295 P--NISYICSRYYRAPELIFGATEYTTAIDMWSIGCVLAELLLGQPLFPGESGVDQLVEIIKILGTPTREEIKCMNPNYT 372 (492)
Q Consensus 295 ~--~~~~~gt~~y~aPE~~~~~~~~~~~~DvwSlGvil~ell~G~~pf~~~~~~~~~~~i~~~~g~p~~~~~~~~~~~~~ 372 (492)
. .+..+.|-+|+|||++.|...|+.++||||+|||+.|||..+..|...+..+++..|...+|+|..+.++.......
T Consensus 211 ~~hMTqEVVTQYYRAPEiLMGaRhYs~AvDiWSVGCIFaELLgRrILFQAq~PiqQL~lItdLLGTPs~EaMr~ACEGAk 290 (449)
T KOG0664|consen 211 RLNMTHEVVTQYYRAPELLMGARRYTGAVDIWSVGCIFAELLQRKILFQAAGPIEQLQMIIDLLGTPSQEAMKYACEGAK 290 (449)
T ss_pred hhhhHHHHHHHHhccHHHhhcchhhcCccceehhhHHHHHHHhhhhhhhccChHHHHHHHHHHhCCCcHHHHHHHhhhhH
Confidence 2 33467799999999999999999999999999999999999999999999999999999999999998864321111
Q ss_pred ------ccCCCcccCCCcccccCCCCChhHhhhhccccccCCCCcCCHHHhhCCCCCCCCCC
Q 011138 373 ------EFKFPQIKAHPWHKIFHKRMPPEALDLVSRLLQYSPSLRCTALEACAHPFFDDLRD 428 (492)
Q Consensus 373 ------~~~~~~~~~~~~~~~~~~~~s~~~~~Li~~~L~~dP~~R~t~~e~l~Hp~f~~~~~ 428 (492)
..+-|..... +...-+..-..++.+++.+||.+||.+|++.++++.|++..+.+-
T Consensus 291 ~H~LR~~~k~Ps~~vL-YtlsS~~~~~heav~~~~~~l~~d~dkris~~~A~~~~~~~e~R~ 351 (449)
T KOG0664|consen 291 NHVLRAGLRAPDTQRL-YKIASPDDKNHEAVDLLQKLLHFDPDKRISVEEALQHRYLEEGRL 351 (449)
T ss_pred HHhhccCCCCCCccce-eeecCCcccchHHHHHHHHHhCCCCcccccHhhhcccccccccce
Confidence 1111111100 000011234467889999999999999999999999999988764
No 206
>cd06656 STKc_PAK3 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 3. Serine/threonine kinases (STKs), p21-activated kinase (PAK) 3, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK3 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding
Probab=100.00 E-value=2.1e-41 Score=334.05 Aligned_cols=254 Identities=27% Similarity=0.415 Sum_probs=203.2
Q ss_pred cceeEeeeeccCCceEEEEEEEcCCCCEEEEEEeccc----hhhHHHHHHHHHHcCCCCccccceeeeeccCCCceEEEE
Q 011138 137 ISYMAERVVGTGSFGVVFQAKCLETGDSVAIKKVLQD----KRYKNRELQIMRLLNHPNVVSLKHCFFSTTEKDELYLNL 212 (492)
Q Consensus 137 ~~y~~~~~lG~G~fg~Vy~~~~~~~g~~vAiK~~~~~----~~~~~~E~~il~~l~h~nIv~l~~~~~~~~~~~~~~~~l 212 (492)
.+|.+.+.||+|+||.||+|.+..+|+.||+|.+... .....+|+.+++.++|+||++++++| ....+.|+
T Consensus 19 ~~y~~~~~lg~g~~g~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~-----~~~~~~~l 93 (297)
T cd06656 19 KKYTRFEKIGQGASGTVYTAIDIATGQEVAIKQMNLQQQPKKELIINEILVMRENKNPNIVNYLDSY-----LVGDELWV 93 (297)
T ss_pred hhceeeeeeccCCCeEEEEEEECCCCCEEEEEEEecCccchHHHHHHHHHHHHhCCCCCEeeEEEEE-----ecCCEEEE
Confidence 4699999999999999999999999999999988532 23345799999999999999999998 44456899
Q ss_pred EeeechhhHHHHhhhhhhcCCCcCHHHHHHHHHHHHHHHHHHHhhCCcccCCCCCCceEEcCCCCcEEEeeecCccccCC
Q 011138 213 VLEYISETVYRVSKHYTRMNQHVPILYVQLYTYQICRALNYLHHVVGVCHRDIKPQNLLVNPHTHQLKICDFGSAKMLVP 292 (492)
Q Consensus 213 V~E~~~~~l~~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~yLH~~~givHrDlKp~NILl~~~~~~vkL~DFG~a~~~~~ 292 (492)
||||++++.+..... ...+++..+..++.|++.||.|||+ .||+||||||+|||++.++ .++|+|||++.....
T Consensus 94 v~e~~~~~~L~~~~~----~~~~~~~~~~~~~~~l~~~L~~LH~-~~i~H~dL~p~Nili~~~~-~~~l~Dfg~~~~~~~ 167 (297)
T cd06656 94 VMEYLAGGSLTDVVT----ETCMDEGQIAAVCRECLQALDFLHS-NQVIHRDIKSDNILLGMDG-SVKLTDFGFCAQITP 167 (297)
T ss_pred eecccCCCCHHHHHH----hCCCCHHHHHHHHHHHHHHHHHHHH-CCcccCCCCHHHEEECCCC-CEEECcCccceEccC
Confidence 999998754432221 2457888899999999999999997 8999999999999999877 799999999876543
Q ss_pred CCC-CccceeccCccCchhhcCCCCCCcchhhHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCCHHHHhhcCCCC
Q 011138 293 GEP-NISYICSRYYRAPELIFGATEYTTAIDMWSIGCVLAELLLGQPLFPGESGVDQLVEIIKILGTPTREEIKCMNPNY 371 (492)
Q Consensus 293 ~~~-~~~~~gt~~y~aPE~~~~~~~~~~~~DvwSlGvil~ell~G~~pf~~~~~~~~~~~i~~~~g~p~~~~~~~~~~~~ 371 (492)
... .....+++.|+|||.+.+ ..++.++|+|||||++|+|++|..||.+.+....+..+.. .+.+.
T Consensus 168 ~~~~~~~~~~~~~y~aPE~~~~-~~~~~~~Di~slGvil~~l~tg~~pf~~~~~~~~~~~~~~-~~~~~----------- 234 (297)
T cd06656 168 EQSKRSTMVGTPYWMAPEVVTR-KAYGPKVDIWSLGIMAIEMVEGEPPYLNENPLRALYLIAT-NGTPE----------- 234 (297)
T ss_pred CccCcCcccCCccccCHHHHcC-CCCCcHHHHHHHHHHHHHHHhCCCCCCCCCcchheeeecc-CCCCC-----------
Confidence 322 234578899999999865 4478999999999999999999999987654332221111 00000
Q ss_pred cccCCCcccCCCcccccCCCCChhHhhhhccccccCCCCcCCHHHhhCCCCCCCCCC
Q 011138 372 TEFKFPQIKAHPWHKIFHKRMPPEALDLVSRLLQYSPSLRCTALEACAHPFFDDLRD 428 (492)
Q Consensus 372 ~~~~~~~~~~~~~~~~~~~~~s~~~~~Li~~~L~~dP~~R~t~~e~l~Hp~f~~~~~ 428 (492)
...+..++..+++||.+||..||.+||++.++++||||+..+.
T Consensus 235 --------------~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~il~~~~~~~~~~ 277 (297)
T cd06656 235 --------------LQNPERLSAVFRDFLNRCLEMDVDRRGSAKELLQHPFLKLAKP 277 (297)
T ss_pred --------------CCCccccCHHHHHHHHHHccCChhhCcCHHHHhcCchhccccc
Confidence 0012346888999999999999999999999999999997654
No 207
>cd06651 STKc_MEKK3 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 3. Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK3 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates the MAPK kinase MEK5 (or MKK5), which in turn phosphorylates and activates extracellular signal-regulated kinase 5 (ERK5). The ERK5 cascade plays roles in promoting cell proliferation, differentiation, neuronal survival, and neuroprotection. MEKK3 plays an essential role in embryonic angiogenesis and early heart development
Probab=100.00 E-value=3.7e-41 Score=326.63 Aligned_cols=250 Identities=28% Similarity=0.463 Sum_probs=196.9
Q ss_pred cceeEeeeeccCCceEEEEEEEcCCCCEEEEEEeccc---------hhhHHHHHHHHHHcCCCCccccceeeeeccCCCc
Q 011138 137 ISYMAERVVGTGSFGVVFQAKCLETGDSVAIKKVLQD---------KRYKNRELQIMRLLNHPNVVSLKHCFFSTTEKDE 207 (492)
Q Consensus 137 ~~y~~~~~lG~G~fg~Vy~~~~~~~g~~vAiK~~~~~---------~~~~~~E~~il~~l~h~nIv~l~~~~~~~~~~~~ 207 (492)
++|...+.||+|+||.||+|.+..+|..||+|++... .....+|+.+++.++||||+++++++... ..
T Consensus 2 ~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~---~~ 78 (266)
T cd06651 2 INWRRGKLLGQGAFGRVYLCYDVDTGRELAAKQVQFDPESPETSKEVSALECEIQLLKNLQHERIVQYYGCLRDR---AE 78 (266)
T ss_pred CCccccceecCCCCEEEEEEEEcCCCcEEEEEEeecCcCCchhHHHHHHHHHHHHHHHHcCCCCeeeEEEEEEcC---CC
Confidence 3689999999999999999999999999999987432 12355799999999999999999887432 23
Q ss_pred eEEEEEeeechhh-HHHHhhhhhhcCCCcCHHHHHHHHHHHHHHHHHHHhhCCcccCCCCCCceEEcCCCCcEEEeeecC
Q 011138 208 LYLNLVLEYISET-VYRVSKHYTRMNQHVPILYVQLYTYQICRALNYLHHVVGVCHRDIKPQNLLVNPHTHQLKICDFGS 286 (492)
Q Consensus 208 ~~~~lV~E~~~~~-l~~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~yLH~~~givHrDlKp~NILl~~~~~~vkL~DFG~ 286 (492)
..+++||||++++ +...+.. ...+++..++.++.||+.||+|||+ .||+||||||+||+++.++ .+||+|||+
T Consensus 79 ~~~~l~~e~~~~~~L~~~l~~----~~~l~~~~~~~~~~qi~~~l~~LH~-~~i~H~~l~p~nil~~~~~-~~~l~dfg~ 152 (266)
T cd06651 79 KTLTIFMEYMPGGSVKDQLKA----YGALTESVTRKYTRQILEGMSYLHS-NMIVHRDIKGANILRDSAG-NVKLGDFGA 152 (266)
T ss_pred CEEEEEEeCCCCCcHHHHHHH----cCCCCHHHHHHHHHHHHHHHHHHHh-CCeeeCCCCHHHEEECCCC-CEEEccCCC
Confidence 4688999999864 4443322 3457888899999999999999997 9999999999999999877 799999999
Q ss_pred ccccCCC----CCCccceeccCccCchhhcCCCCCCcchhhHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCCHH
Q 011138 287 AKMLVPG----EPNISYICSRYYRAPELIFGATEYTTAIDMWSIGCVLAELLLGQPLFPGESGVDQLVEIIKILGTPTRE 362 (492)
Q Consensus 287 a~~~~~~----~~~~~~~gt~~y~aPE~~~~~~~~~~~~DvwSlGvil~ell~G~~pf~~~~~~~~~~~i~~~~g~p~~~ 362 (492)
+...... .......++..|+|||.+.+. .++.++|||||||++|+|++|+.||........+..+.. .+.
T Consensus 153 ~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~-~~~~~~Dv~slG~i~~el~~g~~pf~~~~~~~~~~~~~~---~~~-- 226 (266)
T cd06651 153 SKRLQTICMSGTGIRSVTGTPYWMSPEVISGE-GYGRKADVWSLGCTVVEMLTEKPPWAEYEAMAAIFKIAT---QPT-- 226 (266)
T ss_pred ccccccccccCCccccCCccccccCHHHhCCC-CCCchhhhHHHHHHHHHHHHCCCCccccchHHHHHHHhc---CCC--
Confidence 8754321 111234678899999999664 488999999999999999999999987654444333221 100
Q ss_pred HHhhcCCCCcccCCCcccCCCcccccCCCCChhHhhhhccccccCCCCcCCHHHhhCCCCCC
Q 011138 363 EIKCMNPNYTEFKFPQIKAHPWHKIFHKRMPPEALDLVSRLLQYSPSLRCTALEACAHPFFD 424 (492)
Q Consensus 363 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~Li~~~L~~dP~~R~t~~e~l~Hp~f~ 424 (492)
. + .++..+++.+++|| +||..||++||++.|+++||||+
T Consensus 227 ----------~---~---------~~~~~~~~~~~~li-~~~~~~p~~Rp~~~eil~hp~~~ 265 (266)
T cd06651 227 ----------N---P---------QLPSHISEHARDFL-GCIFVEARHRPSAEELLRHPFAQ 265 (266)
T ss_pred ----------C---C---------CCchhcCHHHHHHH-HHhcCChhhCcCHHHHhcCcccc
Confidence 0 0 12234678899999 57778999999999999999996
No 208
>cd08220 STKc_Nek8 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 8. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 8 (Nek8) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek8 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek8 contains an N-terminal kinase catalytic domain and a C-terminal RCC1 (regulator of chromosome condensation) domain. A double point mutation in Nek8 causes cystic kidney disease in mice that genetically resembles human autosomal recessive polycystic kidney disease (ARPKD). Nek8 is also associated with
Probab=100.00 E-value=5.5e-41 Score=322.87 Aligned_cols=249 Identities=29% Similarity=0.455 Sum_probs=203.8
Q ss_pred ceeEeeeeccCCceEEEEEEEcCCCCEEEEEEeccc------hhhHHHHHHHHHHcCCCCccccceeeeeccCCCceEEE
Q 011138 138 SYMAERVVGTGSFGVVFQAKCLETGDSVAIKKVLQD------KRYKNRELQIMRLLNHPNVVSLKHCFFSTTEKDELYLN 211 (492)
Q Consensus 138 ~y~~~~~lG~G~fg~Vy~~~~~~~g~~vAiK~~~~~------~~~~~~E~~il~~l~h~nIv~l~~~~~~~~~~~~~~~~ 211 (492)
+|.+.+.||+|+||.||+|.+..+++.+|||.+... .....+|+.+++.++||||+++++.+ .....++
T Consensus 1 ~y~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~-----~~~~~~~ 75 (256)
T cd08220 1 KYEKIRVVGRGAFGIVHLCRRKADQKLVIIKQIPVEQMTKDERLAAQNECQVLKLLSHPNIIEYYENF-----LEDKALM 75 (256)
T ss_pred CceEEEEecccCceEEEEEEEcCCCcEEEEEEEeccccccHHHHHHHHHHHHHhhCCCCchhheeeeE-----ecCCEEE
Confidence 489999999999999999999999999999988542 23455799999999999999999987 3445689
Q ss_pred EEeeechhh-HHHHhhhhhhcCCCcCHHHHHHHHHHHHHHHHHHHhhCCcccCCCCCCceEEcCCCCcEEEeeecCcccc
Q 011138 212 LVLEYISET-VYRVSKHYTRMNQHVPILYVQLYTYQICRALNYLHHVVGVCHRDIKPQNLLVNPHTHQLKICDFGSAKML 290 (492)
Q Consensus 212 lV~E~~~~~-l~~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~yLH~~~givHrDlKp~NILl~~~~~~vkL~DFG~a~~~ 290 (492)
+||||++++ +.+.+.. .....+++..+..++.|++.||.|||+ +||+||||||+||+++.++..+||+|||.+...
T Consensus 76 lv~e~~~~~~L~~~~~~--~~~~~~~~~~~~~~~~~i~~~l~~lh~-~~i~h~dl~~~nil~~~~~~~~~l~d~~~~~~~ 152 (256)
T cd08220 76 IVMEYAPGGTLAEYIQK--RCNSLLDEDTILHFFVQILLALHHVHT-KLILHRDLKTQNILLDKHKMVVKIGDFGISKIL 152 (256)
T ss_pred EEEecCCCCCHHHHHHH--hcccCCCHHHHHHHHHHHHHHHHHHHh-CCeecCCCCHHHEEEcCCCCEEEEccCCCceec
Confidence 999999864 4444332 123457889999999999999999997 999999999999999876657899999999876
Q ss_pred CCCCCCccceeccCccCchhhcCCCCCCcchhhHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCCHHHHhhcCCC
Q 011138 291 VPGEPNISYICSRYYRAPELIFGATEYTTAIDMWSIGCVLAELLLGQPLFPGESGVDQLVEIIKILGTPTREEIKCMNPN 370 (492)
Q Consensus 291 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DvwSlGvil~ell~G~~pf~~~~~~~~~~~i~~~~g~p~~~~~~~~~~~ 370 (492)
..........|+..|+|||.+.+. .++.++|||||||++|+|++|..||.+.+.......+....
T Consensus 153 ~~~~~~~~~~~~~~y~aPE~~~~~-~~~~~~Dv~slG~~l~~l~~~~~~~~~~~~~~~~~~~~~~~-------------- 217 (256)
T cd08220 153 SSKSKAYTVVGTPCYISPELCEGK-PYNQKSDIWALGCVLYELASLKRAFEAANLPALVLKIMSGT-------------- 217 (256)
T ss_pred CCCccccccccCCcccCchhccCC-CCCcccchHHHHHHHHHHHhCCCCcccCchHHHHHHHHhcC--------------
Confidence 555444456789999999998654 47899999999999999999999998876655444443210
Q ss_pred CcccCCCcccCCCcccccCCCCChhHhhhhccccccCCCCcCCHHHhhCCCCC
Q 011138 371 YTEFKFPQIKAHPWHKIFHKRMPPEALDLVSRLLQYSPSLRCTALEACAHPFF 423 (492)
Q Consensus 371 ~~~~~~~~~~~~~~~~~~~~~~s~~~~~Li~~~L~~dP~~R~t~~e~l~Hp~f 423 (492)
++ .++..+++++++||.+||..||.+|||+.|+++||||
T Consensus 218 -----~~---------~~~~~~~~~l~~li~~~l~~~p~~Rpt~~~ll~~p~~ 256 (256)
T cd08220 218 -----FA---------PISDRYSPDLRQLILSMLNLDPSKRPQLSQIMAQPIC 256 (256)
T ss_pred -----CC---------CCCCCcCHHHHHHHHHHccCChhhCCCHHHHhhCCCC
Confidence 00 0123468899999999999999999999999999997
No 209
>cd06611 STKc_SLK_like Catalytic domain of Ste20-like kinase-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), Ste20-like kinase (SLK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SLK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of the subfamily include SLK, STK10 (also called LOK for lymphocyte-oriented kinase), SmSLK (Schistosoma mansoni SLK), and related proteins. SLK promotes apoptosis through apoptosis signal-regulating kinase 1 (ASK1) and the mitogen-activated protein kinase (MAPK) p38. It also plays a role in mediating actin reorganization. STK10 is responsible in regulating the CD28 responsive element in T cells, as well as leukocyte function associated anti
Probab=100.00 E-value=1.8e-41 Score=331.25 Aligned_cols=256 Identities=27% Similarity=0.388 Sum_probs=204.1
Q ss_pred cceeEeeeeccCCceEEEEEEEcCCCCEEEEEEeccch----hhHHHHHHHHHHcCCCCccccceeeeeccCCCceEEEE
Q 011138 137 ISYMAERVVGTGSFGVVFQAKCLETGDSVAIKKVLQDK----RYKNRELQIMRLLNHPNVVSLKHCFFSTTEKDELYLNL 212 (492)
Q Consensus 137 ~~y~~~~~lG~G~fg~Vy~~~~~~~g~~vAiK~~~~~~----~~~~~E~~il~~l~h~nIv~l~~~~~~~~~~~~~~~~l 212 (492)
.+|.+.+.||.|+||.||++.+..++..||+|.+.... ....+|+.+++.++||||+++++.+. ....+|+
T Consensus 5 ~~~~i~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~-----~~~~~~l 79 (280)
T cd06611 5 DIWEIIGELGDGAFGKVYKAQHKETGLFAAAKIIQIESEEELEDFMVEIDILSECKHPNIVGLYEAYF-----YENKLWI 79 (280)
T ss_pred hHHHHHHHhcCCCCceEEEEEEcCCCcEEEEEEEeeCCHHHHHHHHHHHHHHHhCCCCceeEEEEEEe-----cCCeEEE
Confidence 46999999999999999999998899999999885432 23457999999999999999999884 3446899
Q ss_pred EeeechhhHHHHhhhhhhcCCCcCHHHHHHHHHHHHHHHHHHHhhCCcccCCCCCCceEEcCCCCcEEEeeecCccccCC
Q 011138 213 VLEYISETVYRVSKHYTRMNQHVPILYVQLYTYQICRALNYLHHVVGVCHRDIKPQNLLVNPHTHQLKICDFGSAKMLVP 292 (492)
Q Consensus 213 V~E~~~~~l~~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~yLH~~~givHrDlKp~NILl~~~~~~vkL~DFG~a~~~~~ 292 (492)
||||++++.+.... ......+++..++.++.|++.||.|||+ .||+|+||||+||+++.++ .++|+|||++.....
T Consensus 80 v~e~~~~~~L~~~~--~~~~~~l~~~~~~~~~~ql~~~l~~lh~-~~i~h~dl~p~nili~~~~-~~~l~d~g~~~~~~~ 155 (280)
T cd06611 80 LIEFCDGGALDSIM--LELERGLTEPQIRYVCRQMLEALNFLHS-HKVIHRDLKAGNILLTLDG-DVKLADFGVSAKNKS 155 (280)
T ss_pred EeeccCCCcHHHHH--HHhcCCCCHHHHHHHHHHHHHHHHHHHH-CCcccCCCChhhEEECCCC-CEEEccCccchhhcc
Confidence 99999976443322 2223568999999999999999999997 9999999999999999887 799999998865432
Q ss_pred CC-CCccceeccCccCchhhcC----CCCCCcchhhHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCCHHHHhhc
Q 011138 293 GE-PNISYICSRYYRAPELIFG----ATEYTTAIDMWSIGCVLAELLLGQPLFPGESGVDQLVEIIKILGTPTREEIKCM 367 (492)
Q Consensus 293 ~~-~~~~~~gt~~y~aPE~~~~----~~~~~~~~DvwSlGvil~ell~G~~pf~~~~~~~~~~~i~~~~g~p~~~~~~~~ 367 (492)
.. ......+++.|+|||++.. ...++.++|+|||||++|+|++|++||...+....+..+... .+
T Consensus 156 ~~~~~~~~~~~~~y~~PE~~~~~~~~~~~~~~~sDi~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~--~~-------- 225 (280)
T cd06611 156 TLQKRDTFIGTPYWMAPEVVACETFKDNPYDYKADIWSLGITLIELAQMEPPHHELNPMRVLLKILKS--EP-------- 225 (280)
T ss_pred cccccceeecchhhcCHHHHhhcccCCCCCCccccHHHHHHHHHHHHhCCCCcccCCHHHHHHHHhcC--CC--------
Confidence 22 2234578999999999852 234678999999999999999999999877655444433220 00
Q ss_pred CCCCcccCCCcccCCCcccccCCCCChhHhhhhccccccCCCCcCCHHHhhCCCCCCCCC
Q 011138 368 NPNYTEFKFPQIKAHPWHKIFHKRMPPEALDLVSRLLQYSPSLRCTALEACAHPFFDDLR 427 (492)
Q Consensus 368 ~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~Li~~~L~~dP~~R~t~~e~l~Hp~f~~~~ 427 (492)
+.+ ..+..++.++.+||.+||+.||.+||++.++++||||.+..
T Consensus 226 ---------~~~-------~~~~~~~~~~~~li~~~l~~~p~~Rps~~~il~~~~~~~~~ 269 (280)
T cd06611 226 ---------PTL-------DQPSKWSSSFNDFLKSCLVKDPDDRPTAAELLKHPFVSDQS 269 (280)
T ss_pred ---------CCc-------CCcccCCHHHHHHHHHHhccChhhCcCHHHHhcChhhcccc
Confidence 000 01134688999999999999999999999999999998763
No 210
>cd06628 STKc_MAPKKK_Byr2_like Catalytic domain of fungal Byr2-like MAP Kinase Kinase Kinases. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, fungal Byr2-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include the MAPKKKs Schizosaccharomyces pombe Byr2, Saccharomyces cerevisiae and Cryptococcus neoformans Ste11, and related proteins. They contain an N-terminal SAM (sterile alpha-motif) domain, which mediates protein-protein interaction, and a C-terminal catalytic domain. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate
Probab=100.00 E-value=3.6e-41 Score=326.53 Aligned_cols=246 Identities=31% Similarity=0.518 Sum_probs=198.0
Q ss_pred ceeEeeeeccCCceEEEEEEEcCCCCEEEEEEeccch-------------hhHHHHHHHHHHcCCCCccccceeeeeccC
Q 011138 138 SYMAERVVGTGSFGVVFQAKCLETGDSVAIKKVLQDK-------------RYKNRELQIMRLLNHPNVVSLKHCFFSTTE 204 (492)
Q Consensus 138 ~y~~~~~lG~G~fg~Vy~~~~~~~g~~vAiK~~~~~~-------------~~~~~E~~il~~l~h~nIv~l~~~~~~~~~ 204 (492)
+|.++..||.|+||.||+|.+..+++.||+|.+.... ....+|+.+++.++||||+++++++.
T Consensus 1 ~~~~~~~ig~g~~~~v~~a~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~---- 76 (267)
T cd06628 1 KWIKGALIGSGSFGSVYLGMNASSGELMAVKQVELPSVSASSKDRKRSMLDALAREIALLKELQHENIVQYLGSSL---- 76 (267)
T ss_pred CccccceeecCCCeEEEEEEecCCCcEEEEEEecCCCcccchhHHHHHHHHHHHHHHHHHHhcCCCCeeeEEEEEE----
Confidence 3778899999999999999999999999999874321 23457999999999999999999873
Q ss_pred CCceEEEEEeeechhh-HHHHhhhhhhcCCCcCHHHHHHHHHHHHHHHHHHHhhCCcccCCCCCCceEEcCCCCcEEEee
Q 011138 205 KDELYLNLVLEYISET-VYRVSKHYTRMNQHVPILYVQLYTYQICRALNYLHHVVGVCHRDIKPQNLLVNPHTHQLKICD 283 (492)
Q Consensus 205 ~~~~~~~lV~E~~~~~-l~~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~yLH~~~givHrDlKp~NILl~~~~~~vkL~D 283 (492)
+..+.++||||++++ +...+. ....+++..+..++.|++.||.|||+ .|++||||||+||+++.++ .+||+|
T Consensus 77 -~~~~~~lv~e~~~~~~L~~~l~----~~~~l~~~~~~~~~~~l~~~l~~lH~-~~ivH~di~p~nil~~~~~-~~~l~d 149 (267)
T cd06628 77 -DADHLNIFLEYVPGGSVAALLN----NYGAFEETLVRNFVRQILKGLNYLHN-RGIIHRDIKGANILVDNKG-GIKISD 149 (267)
T ss_pred -eCCccEEEEEecCCCCHHHHHH----hccCccHHHHHHHHHHHHHHHHHHHh-cCcccccCCHHHEEEcCCC-CEEecc
Confidence 344688999999865 433332 23567888899999999999999997 9999999999999999887 799999
Q ss_pred ecCccccCCCC-------CCccceeccCccCchhhcCCCCCCcchhhHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHh
Q 011138 284 FGSAKMLVPGE-------PNISYICSRYYRAPELIFGATEYTTAIDMWSIGCVLAELLLGQPLFPGESGVDQLVEIIKIL 356 (492)
Q Consensus 284 FG~a~~~~~~~-------~~~~~~gt~~y~aPE~~~~~~~~~~~~DvwSlGvil~ell~G~~pf~~~~~~~~~~~i~~~~ 356 (492)
||+++...... ......|+..|+|||.+.+. .++.++|+|||||++|+|++|+.||...+....+..+...
T Consensus 150 fg~~~~~~~~~~~~~~~~~~~~~~~~~~y~~pe~~~~~-~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~- 227 (267)
T cd06628 150 FGISKKLEANSLSTKTNGARPSLQGSVFWMAPEVVKQT-SYTRKADIWSLGCLVVEMLTGKHPFPDCTQLQAIFKIGEN- 227 (267)
T ss_pred cCCCcccccccccCCccccccccCCCcCccChhHhccC-CCCchhhhHHHHHHHHHHhhCCCCCCCccHHHHHHHHhcc-
Confidence 99987664211 11234678899999998654 4789999999999999999999999876654444333220
Q ss_pred CCCCHHHHhhcCCCCcccCCCcccCCCcccccCCCCChhHhhhhccccccCCCCcCCHHHhhCCCCC
Q 011138 357 GTPTREEIKCMNPNYTEFKFPQIKAHPWHKIFHKRMPPEALDLVSRLLQYSPSLRCTALEACAHPFF 423 (492)
Q Consensus 357 g~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~Li~~~L~~dP~~R~t~~e~l~Hp~f 423 (492)
..+ .++..++.++.+||++||+.||.+||++.++++||||
T Consensus 228 ------------------~~~---------~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~il~~~~~ 267 (267)
T cd06628 228 ------------------ASP---------EIPSNISSEAIDFLEKTFEIDHNKRPTAAELLKHPFL 267 (267)
T ss_pred ------------------CCC---------cCCcccCHHHHHHHHHHccCCchhCcCHHHHhhCCCC
Confidence 001 1223578899999999999999999999999999998
No 211
>cd06636 STKc_MAP4K4_6 Catalytic domain of the Protein Serine/Threonine Kinases, Mitogen-Activated Protein Kinase Kinase Kinase Kinase 4 and 6. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 4 (MAPKKKK4 or MAP4K4) and MAPKKKK6 (or MAP4K6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K4/MAP4K6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain. MAP4Ks (or MAPKKKKs) are involved in MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Ea
Probab=100.00 E-value=3.8e-41 Score=329.30 Aligned_cols=256 Identities=26% Similarity=0.392 Sum_probs=200.8
Q ss_pred cceeEeeeeccCCceEEEEEEEcCCCCEEEEEEeccch---hhHHHHHHHHHHc-CCCCccccceeeeeccC-CCceEEE
Q 011138 137 ISYMAERVVGTGSFGVVFQAKCLETGDSVAIKKVLQDK---RYKNRELQIMRLL-NHPNVVSLKHCFFSTTE-KDELYLN 211 (492)
Q Consensus 137 ~~y~~~~~lG~G~fg~Vy~~~~~~~g~~vAiK~~~~~~---~~~~~E~~il~~l-~h~nIv~l~~~~~~~~~-~~~~~~~ 211 (492)
..|.+.+.||.|+||.||+|.+..+++.||+|.+.... .....|+.+++.+ +|+||+++++++..... ....++|
T Consensus 16 ~~~~~~~~lg~g~~~~v~~~~~~~~~~~~a~K~~~~~~~~~~~~~~e~~~l~~~~~h~~i~~~~~~~~~~~~~~~~~~~~ 95 (282)
T cd06636 16 GIFELVEVVGNGTYGQVYKGRHVKTGQLAAIKVMDVTEDEEEEIKLEINMLKKYSHHRNIATYYGAFIKKSPPGHDDQLW 95 (282)
T ss_pred hhhhhheeeccCCCeEEEEEEEcCCCcEEEEEEEecChHHHHHHHHHHHHHHHhcCCCcEEEEeeehhcccccCCCCEEE
Confidence 46999999999999999999999999999999875432 3445788888888 69999999998864322 2345789
Q ss_pred EEeeechhh-HHHHhhhhhhcCCCcCHHHHHHHHHHHHHHHHHHHhhCCcccCCCCCCceEEcCCCCcEEEeeecCcccc
Q 011138 212 LVLEYISET-VYRVSKHYTRMNQHVPILYVQLYTYQICRALNYLHHVVGVCHRDIKPQNLLVNPHTHQLKICDFGSAKML 290 (492)
Q Consensus 212 lV~E~~~~~-l~~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~yLH~~~givHrDlKp~NILl~~~~~~vkL~DFG~a~~~ 290 (492)
+||||++++ +..++... ....+++..+..++.||+.||.|||+ +||+||||||+||+++.++ .++|+|||++...
T Consensus 96 iv~e~~~~~~L~~~~~~~--~~~~~~~~~~~~~~~qi~~al~~LH~-~~ivH~dl~~~nili~~~~-~~~l~dfg~~~~~ 171 (282)
T cd06636 96 LVMEFCGAGSVTDLVKNT--KGNALKEDWIAYICREILRGLAHLHA-HKVIHRDIKGQNVLLTENA-EVKLVDFGVSAQL 171 (282)
T ss_pred EEEEeCCCCcHHHHHHHc--cCCCCCHHHHHHHHHHHHHHHHHHHH-CCcccCCCCHHHEEECCCC-CEEEeeCcchhhh
Confidence 999999864 44444321 23457888889999999999999997 9999999999999999887 7999999998754
Q ss_pred CCC-CCCccceeccCccCchhhcC----CCCCCcchhhHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCCHHHHh
Q 011138 291 VPG-EPNISYICSRYYRAPELIFG----ATEYTTAIDMWSIGCVLAELLLGQPLFPGESGVDQLVEIIKILGTPTREEIK 365 (492)
Q Consensus 291 ~~~-~~~~~~~gt~~y~aPE~~~~----~~~~~~~~DvwSlGvil~ell~G~~pf~~~~~~~~~~~i~~~~g~p~~~~~~ 365 (492)
... .......|++.|+|||++.. ...++.++|+|||||++|+|++|..||........+..+... +
T Consensus 172 ~~~~~~~~~~~~~~~y~aPE~l~~~~~~~~~~~~~~DvwslG~~l~el~~g~~p~~~~~~~~~~~~~~~~---~------ 242 (282)
T cd06636 172 DRTVGRRNTFIGTPYWMAPEVIACDENPDATYDYRSDIWSLGITAIEMAEGAPPLCDMHPMRALFLIPRN---P------ 242 (282)
T ss_pred hccccCCCcccccccccCHhhcCcccCcCcCCCcccchhHHHHHHHHHHhCCCCccccCHHhhhhhHhhC---C------
Confidence 321 22334678999999999853 234788999999999999999999999766544333322110 0
Q ss_pred hcCCCCcccCCCcccCCCcccccCCCCChhHhhhhccccccCCCCcCCHHHhhCCCCC
Q 011138 366 CMNPNYTEFKFPQIKAHPWHKIFHKRMPPEALDLVSRLLQYSPSLRCTALEACAHPFF 423 (492)
Q Consensus 366 ~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~Li~~~L~~dP~~R~t~~e~l~Hp~f 423 (492)
.+ ......++.++.+||.+||..||.+||++.|++.||||
T Consensus 243 ----------~~--------~~~~~~~~~~~~~li~~cl~~~p~~Rp~~~ell~~~~~ 282 (282)
T cd06636 243 ----------PP--------KLKSKKWSKKFIDFIEGCLVKNYLSRPSTEQLLKHPFI 282 (282)
T ss_pred ----------CC--------CCcccccCHHHHHHHHHHhCCChhhCcCHHHHhcCCCC
Confidence 00 00113468899999999999999999999999999997
No 212
>cd06646 STKc_MAP4K5 Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-activated protein kinase kinase kinase kinase 5. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 5 (MAPKKKK5 or MAP4K5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Each MAPK cascade is activated
Probab=100.00 E-value=2.3e-41 Score=328.08 Aligned_cols=250 Identities=26% Similarity=0.390 Sum_probs=197.0
Q ss_pred ceeEeeeeccCCceEEEEEEEcCCCCEEEEEEeccc----hhhHHHHHHHHHHcCCCCccccceeeeeccCCCceEEEEE
Q 011138 138 SYMAERVVGTGSFGVVFQAKCLETGDSVAIKKVLQD----KRYKNRELQIMRLLNHPNVVSLKHCFFSTTEKDELYLNLV 213 (492)
Q Consensus 138 ~y~~~~~lG~G~fg~Vy~~~~~~~g~~vAiK~~~~~----~~~~~~E~~il~~l~h~nIv~l~~~~~~~~~~~~~~~~lV 213 (492)
+|.+.+.||+|+||.||+|++..+|+.||+|++... .....+|+.+++.++||||+++++++. ....+++|
T Consensus 10 ~y~~~~~lg~g~~g~vy~~~~~~~~~~~aik~~~~~~~~~~~~~~~e~~~l~~~~h~~ii~~~~~~~-----~~~~~~iv 84 (267)
T cd06646 10 DYELIQRVGSGTYGDVYKARNLHTGELAAVKIIKLEPGDDFSLIQQEIFMVKECKHCNIVAYFGSYL-----SREKLWIC 84 (267)
T ss_pred hcchhheeecCCCeEEEEEEECCCCeEEEEEEEecCccchHHHHHHHHHHHHhcCCCCeeeeeEEEE-----eCCEEEEE
Confidence 599999999999999999999999999999988532 234567999999999999999999884 33468899
Q ss_pred eeechhhHH-HHhhhhhhcCCCcCHHHHHHHHHHHHHHHHHHHhhCCcccCCCCCCceEEcCCCCcEEEeeecCccccCC
Q 011138 214 LEYISETVY-RVSKHYTRMNQHVPILYVQLYTYQICRALNYLHHVVGVCHRDIKPQNLLVNPHTHQLKICDFGSAKMLVP 292 (492)
Q Consensus 214 ~E~~~~~l~-~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~yLH~~~givHrDlKp~NILl~~~~~~vkL~DFG~a~~~~~ 292 (492)
|||++++.+ ..+. ....+++..+..++.|++.||.|||+ +||+||||||+||+++.++ .+||+|||++.....
T Consensus 85 ~e~~~~~~L~~~~~----~~~~~~~~~~~~~~~qi~~~l~~lH~-~~i~H~dl~p~nill~~~~-~~~l~dfg~~~~~~~ 158 (267)
T cd06646 85 MEYCGGGSLQDIYH----VTGPLSELQIAYVCRETLQGLAYLHS-KGKMHRDIKGANILLTDNG-DVKLADFGVAAKITA 158 (267)
T ss_pred EeCCCCCcHHHHHH----hcCCCCHHHHHHHHHHHHHHHHHHHH-CCccccCCCHHHEEECCCC-CEEECcCccceeecc
Confidence 999986544 3332 23568889999999999999999997 9999999999999999887 799999999976533
Q ss_pred CC-CCccceeccCccCchhhcC--CCCCCcchhhHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCCHHHHhhcCC
Q 011138 293 GE-PNISYICSRYYRAPELIFG--ATEYTTAIDMWSIGCVLAELLLGQPLFPGESGVDQLVEIIKILGTPTREEIKCMNP 369 (492)
Q Consensus 293 ~~-~~~~~~gt~~y~aPE~~~~--~~~~~~~~DvwSlGvil~ell~G~~pf~~~~~~~~~~~i~~~~g~p~~~~~~~~~~ 369 (492)
.. ......|++.|+|||.+.+ ...++.++|+|||||++|+|++|..||......+....+..
T Consensus 159 ~~~~~~~~~~~~~y~~PE~~~~~~~~~~~~~~Dvws~G~il~el~~g~~p~~~~~~~~~~~~~~~--------------- 223 (267)
T cd06646 159 TIAKRKSFIGTPYWMAPEVAAVEKNGGYNQLCDIWAVGITAIELAELQPPMFDLHPMRALFLMSK--------------- 223 (267)
T ss_pred cccccCccccCccccCHhHcccccCCCCcchhhHHHHHHHHHHHHhCCCCccccchhhhheeeec---------------
Confidence 22 2334578899999998842 33478899999999999999999999965543322221111
Q ss_pred CCcccCCCcccCCCcccccCCCCChhHhhhhccccccCCCCcCCHHHhhCCCC
Q 011138 370 NYTEFKFPQIKAHPWHKIFHKRMPPEALDLVSRLLQYSPSLRCTALEACAHPF 422 (492)
Q Consensus 370 ~~~~~~~~~~~~~~~~~~~~~~~s~~~~~Li~~~L~~dP~~R~t~~e~l~Hp~ 422 (492)
..+..+... ....++..+.+||++||..||++|||++++++|+|
T Consensus 224 --~~~~~~~~~-------~~~~~~~~~~~li~~~l~~~P~~Rp~~~~il~~l~ 267 (267)
T cd06646 224 --SNFQPPKLK-------DKTKWSSTFHNFVKISLTKNPKKRPTAERLLTHLF 267 (267)
T ss_pred --CCCCCCCCc-------cccccCHHHHHHHHHHhhCChhhCcCHHHHhcCCC
Confidence 001111100 11246889999999999999999999999999998
No 213
>KOG4721 consensus Serine/threonine protein kinase, contains leucine zipper domain [Signal transduction mechanisms]
Probab=100.00 E-value=1.2e-42 Score=343.76 Aligned_cols=241 Identities=24% Similarity=0.398 Sum_probs=200.7
Q ss_pred eeEeeeeccCCceEEEEEEEcCCCCEEEEEEeccchhhHHHHHHHHHHcCCCCccccceeeeeccCCCceEEEEEeeech
Q 011138 139 YMAERVVGTGSFGVVFQAKCLETGDSVAIKKVLQDKRYKNRELQIMRLLNHPNVVSLKHCFFSTTEKDELYLNLVLEYIS 218 (492)
Q Consensus 139 y~~~~~lG~G~fg~Vy~~~~~~~g~~vAiK~~~~~~~~~~~E~~il~~l~h~nIv~l~~~~~~~~~~~~~~~~lV~E~~~ 218 (492)
...++-||.|+-|.||+|+. .++.||||++.. ..+.+++-|++|+||||+.+.+++ ...-.+|||||||.
T Consensus 126 IsELeWlGSGaQGAVF~Grl--~netVAVKKV~e---lkETdIKHLRkLkH~NII~FkGVC-----tqsPcyCIiMEfCa 195 (904)
T KOG4721|consen 126 ISELEWLGSGAQGAVFLGRL--HNETVAVKKVRE---LKETDIKHLRKLKHPNIITFKGVC-----TQSPCYCIIMEFCA 195 (904)
T ss_pred hhhhhhhccCcccceeeeec--cCceehhHHHhh---hhhhhHHHHHhccCcceeeEeeee-----cCCceeEEeeeccc
Confidence 34456799999999999986 578999998743 345688999999999999999999 55557899999998
Q ss_pred -hhHHHHhhhhhhcCCCcCHHHHHHHHHHHHHHHHHHHhhCCcccCCCCCCceEEcCCCCcEEEeeecCccccCCCCCCc
Q 011138 219 -ETVYRVSKHYTRMNQHVPILYVQLYTYQICRALNYLHHVVGVCHRDIKPQNLLVNPHTHQLKICDFGSAKMLVPGEPNI 297 (492)
Q Consensus 219 -~~l~~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~yLH~~~givHrDlKp~NILl~~~~~~vkL~DFG~a~~~~~~~~~~ 297 (492)
|-|+..++. .+.+.......|..+|+.|+.|||. +.|||||||.-||||.-+. .|||+|||.++........+
T Consensus 196 ~GqL~~VLka----~~~itp~llv~Wsk~IA~GM~YLH~-hKIIHRDLKSPNiLIs~~d-~VKIsDFGTS~e~~~~STkM 269 (904)
T KOG4721|consen 196 QGQLYEVLKA----GRPITPSLLVDWSKGIAGGMNYLHL-HKIIHRDLKSPNILISYDD-VVKISDFGTSKELSDKSTKM 269 (904)
T ss_pred cccHHHHHhc----cCccCHHHHHHHHHHhhhhhHHHHH-hhHhhhccCCCceEeeccc-eEEeccccchHhhhhhhhhh
Confidence 556665543 5678888889999999999999996 9999999999999999777 79999999999887777778
Q ss_pred cceeccCccCchhhcCCCCCCcchhhHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCCHHHHhhcCCCCcccCCC
Q 011138 298 SYICSRYYRAPELIFGATEYTTAIDMWSIGCVLAELLLGQPLFPGESGVDQLVEIIKILGTPTREEIKCMNPNYTEFKFP 377 (492)
Q Consensus 298 ~~~gt~~y~aPE~~~~~~~~~~~~DvwSlGvil~ell~G~~pf~~~~~~~~~~~i~~~~g~p~~~~~~~~~~~~~~~~~~ 377 (492)
.++||..|||||+|.. .+.+.++|||||||||||||||..||..-+....+. .
T Consensus 270 SFaGTVaWMAPEvIrn-ePcsEKVDIwSfGVVLWEmLT~EiPYkdVdssAIIw----G---------------------- 322 (904)
T KOG4721|consen 270 SFAGTVAWMAPEVIRN-EPCSEKVDIWSFGVVLWEMLTGEIPYKDVDSSAIIW----G---------------------- 322 (904)
T ss_pred hhhhhHhhhCHHHhhc-CCcccccceehhHHHHHHHHhcCCCccccchheeEE----e----------------------
Confidence 9999999999999965 458999999999999999999999997755432221 1
Q ss_pred cccCCCcccccCCCCChhHhhhhccccccCCCCcCCHHHhhCCCCC
Q 011138 378 QIKAHPWHKIFHKRMPPEALDLVSRLLQYSPSLRCTALEACAHPFF 423 (492)
Q Consensus 378 ~~~~~~~~~~~~~~~s~~~~~Li~~~L~~dP~~R~t~~e~l~Hp~f 423 (492)
+..+.++...+...++-++=||+.||.-.|..||+..++|.|-=+
T Consensus 323 -VGsNsL~LpvPstcP~GfklL~Kqcw~sKpRNRPSFrqil~HldI 367 (904)
T KOG4721|consen 323 -VGSNSLHLPVPSTCPDGFKLLLKQCWNSKPRNRPSFRQILLHLDI 367 (904)
T ss_pred -ccCCcccccCcccCchHHHHHHHHHHhcCCCCCccHHHHHHHHhh
Confidence 122233344556788999999999999999999999999998433
No 214
>cd08529 STKc_FA2-like Catalytic domain of the Protein Serine/Threonine Kinase, Chlamydomonas reinhardtii FA2 and similar domains. Serine/Threonine Kinases (STKs), Chlamydomonas reinhardtii FA2-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Chlamydomonas reinhardtii FA2-like subfamily belongs to the (NIMA)-related kinase (Nek) family. The Nek family includes seven different Chlamydomonas Neks (CNKs 1-6 and Fa2). This subfamily includes FA2 and CNK4. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Chlamydomonas reinhardtii FA2 was discovered in a genetic screen for deflagellation-defective mutants. It is essential for basal-body/centriole-associated microtubule severing, and plays a role in cell cyc
Probab=100.00 E-value=1.1e-40 Score=320.70 Aligned_cols=248 Identities=25% Similarity=0.384 Sum_probs=201.0
Q ss_pred ceeEeeeeccCCceEEEEEEEcCCCCEEEEEEeccc------hhhHHHHHHHHHHcCCCCccccceeeeeccCCCceEEE
Q 011138 138 SYMAERVVGTGSFGVVFQAKCLETGDSVAIKKVLQD------KRYKNRELQIMRLLNHPNVVSLKHCFFSTTEKDELYLN 211 (492)
Q Consensus 138 ~y~~~~~lG~G~fg~Vy~~~~~~~g~~vAiK~~~~~------~~~~~~E~~il~~l~h~nIv~l~~~~~~~~~~~~~~~~ 211 (492)
+|.+.+.||+|+||.||+|.+..+|+.|++|.+... .....+|+.+++.++||||+++++++ .+....|
T Consensus 1 ~~~~~~~l~~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~-----~~~~~~~ 75 (256)
T cd08529 1 DFEILNKIGKGSFGVVFKVVRKADKRVYAMKQIDLSKMNRREREEAIDEARVLAKLDSSYIIRYYESF-----LDKGKLN 75 (256)
T ss_pred CceEeEEecCCCCeEEEEEEEcCCCcEEEEEEeehhhCCHHHHHHHHHHHHHHHhcCCCCeehheeee-----ccCCEEE
Confidence 378889999999999999999999999999987432 23345799999999999999999988 4445689
Q ss_pred EEeeechhh-HHHHhhhhhhcCCCcCHHHHHHHHHHHHHHHHHHHhhCCcccCCCCCCceEEcCCCCcEEEeeecCcccc
Q 011138 212 LVLEYISET-VYRVSKHYTRMNQHVPILYVQLYTYQICRALNYLHHVVGVCHRDIKPQNLLVNPHTHQLKICDFGSAKML 290 (492)
Q Consensus 212 lV~E~~~~~-l~~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~yLH~~~givHrDlKp~NILl~~~~~~vkL~DFG~a~~~ 290 (492)
+||||+.++ +...+.. .....++...+..++.||+.||.|||+ .||+||||||+||+++.++ .+||+|||+++..
T Consensus 76 lv~e~~~~~~L~~~l~~--~~~~~~~~~~~~~i~~~l~~al~~lH~-~~i~h~dl~~~nili~~~~-~~~l~df~~~~~~ 151 (256)
T cd08529 76 IVMEYAENGDLHKLLKM--QRGRPLPEDQVWRFFIQILLGLAHLHS-KKILHRDIKSLNLFLDAYD-NVKIGDLGVAKLL 151 (256)
T ss_pred EEEEeCCCCcHHHHHHH--hcCCCCCHHHHHHHHHHHHHHHHHHHH-CCcccCCCCcceEEEeCCC-CEEEcccccceec
Confidence 999999764 4444332 124568888999999999999999997 9999999999999999887 7999999998866
Q ss_pred CCCCC-CccceeccCccCchhhcCCCCCCcchhhHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCCHHHHhhcCC
Q 011138 291 VPGEP-NISYICSRYYRAPELIFGATEYTTAIDMWSIGCVLAELLLGQPLFPGESGVDQLVEIIKILGTPTREEIKCMNP 369 (492)
Q Consensus 291 ~~~~~-~~~~~gt~~y~aPE~~~~~~~~~~~~DvwSlGvil~ell~G~~pf~~~~~~~~~~~i~~~~g~p~~~~~~~~~~ 369 (492)
..... .....|++.|+|||++.+. .++.++|+|||||++|+|++|+.||...+..+....+...
T Consensus 152 ~~~~~~~~~~~~~~~y~aPE~~~~~-~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~-------------- 216 (256)
T cd08529 152 SDNTNFANTIVGTPYYLSPELCEDK-PYNEKSDVWALGVVLYECCTGKHPFDANNQGALILKIIRG-------------- 216 (256)
T ss_pred cCccchhhccccCccccCHHHhcCC-CCCCccchHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHcC--------------
Confidence 43322 2345688999999999654 4889999999999999999999999887755444443221
Q ss_pred CCcccCCCcccCCCcccccCCCCChhHhhhhccccccCCCCcCCHHHhhCCCCC
Q 011138 370 NYTEFKFPQIKAHPWHKIFHKRMPPEALDLVSRLLQYSPSLRCTALEACAHPFF 423 (492)
Q Consensus 370 ~~~~~~~~~~~~~~~~~~~~~~~s~~~~~Li~~~L~~dP~~R~t~~e~l~Hp~f 423 (492)
.++. +...++.++.++|.+||+.+|++||++.+++.|||+
T Consensus 217 -----~~~~---------~~~~~~~~~~~~i~~~l~~~p~~Rp~~~~ll~~~~~ 256 (256)
T cd08529 217 -----VFPP---------VSQMYSQQLAQLIDQCLTKDYRQRPDTFQLLRNPSL 256 (256)
T ss_pred -----CCCC---------CccccCHHHHHHHHHHccCCcccCcCHHHHhhCCCC
Confidence 0111 112468899999999999999999999999999996
No 215
>cd06631 STKc_YSK4 Catalytic domain of the Protein Serine/Threonine Kinase, Yeast Sps1/Ste20-related kinase 4. Serine/threonine kinases (STKs), yeast Sps1/Ste20-related kinase 4 (YSK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The YSK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. YSK4 is a putative MAPKKK, whose mammalian gene has been isolated. MAPKKKs (MKKKs or MAP3Ks) phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals.
Probab=100.00 E-value=6.8e-41 Score=324.34 Aligned_cols=247 Identities=27% Similarity=0.445 Sum_probs=196.7
Q ss_pred ceeEeeeeccCCceEEEEEEEcCCCCEEEEEEeccch----------hhHHHHHHHHHHcCCCCccccceeeeeccCCCc
Q 011138 138 SYMAERVVGTGSFGVVFQAKCLETGDSVAIKKVLQDK----------RYKNRELQIMRLLNHPNVVSLKHCFFSTTEKDE 207 (492)
Q Consensus 138 ~y~~~~~lG~G~fg~Vy~~~~~~~g~~vAiK~~~~~~----------~~~~~E~~il~~l~h~nIv~l~~~~~~~~~~~~ 207 (492)
+|.+++.||+|+||.||+|.+ .+|+.+|+|.+.... ....+|+++++.++|+||+++++++ .+.
T Consensus 1 ~~~~~~~ig~g~~~~v~~~~~-~~~~~~avk~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~-----~~~ 74 (265)
T cd06631 1 EWTKGEVLGKGAYGTVYCGLT-NQGQLIAVKQVELDTSNVLAAEKEYEKLQEEVDLLKSLKHVNIVQYLGTC-----LDD 74 (265)
T ss_pred CccccceEeccCCeEEEEEEE-cCCCeEEEEEeecCccchhhHHHHHHHHHHHHHHHHhcCCCCEeeEeeEe-----ecC
Confidence 378889999999999999986 578999999875321 2345799999999999999999988 444
Q ss_pred eEEEEEeeechhhHH-HHhhhhhhcCCCcCHHHHHHHHHHHHHHHHHHHhhCCcccCCCCCCceEEcCCCCcEEEeeecC
Q 011138 208 LYLNLVLEYISETVY-RVSKHYTRMNQHVPILYVQLYTYQICRALNYLHHVVGVCHRDIKPQNLLVNPHTHQLKICDFGS 286 (492)
Q Consensus 208 ~~~~lV~E~~~~~l~-~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~yLH~~~givHrDlKp~NILl~~~~~~vkL~DFG~ 286 (492)
.++++||||+.++.+ ..+. ....+++..+..++.||+.||.|||+ .||+|+||||+||+++.++ .++|+|||+
T Consensus 75 ~~~~lv~e~~~~~~L~~~l~----~~~~~~~~~~~~~~~qi~~~l~~lH~-~~i~H~dl~p~nil~~~~~-~~~l~dfg~ 148 (265)
T cd06631 75 NTISIFMEFVPGGSISSILN----RFGPLPEPVFCKYTKQILDGVAYLHN-NCVVHRDIKGNNVMLMPNG-IIKLIDFGC 148 (265)
T ss_pred CeEEEEEecCCCCcHHHHHH----hcCCCCHHHHHHHHHHHHHHHHHHHh-CCcccCCcCHHhEEECCCC-eEEeccchh
Confidence 578999999987544 3332 23467889999999999999999997 8999999999999999887 899999999
Q ss_pred ccccCCC-------CCCccceeccCccCchhhcCCCCCCcchhhHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCC
Q 011138 287 AKMLVPG-------EPNISYICSRYYRAPELIFGATEYTTAIDMWSIGCVLAELLLGQPLFPGESGVDQLVEIIKILGTP 359 (492)
Q Consensus 287 a~~~~~~-------~~~~~~~gt~~y~aPE~~~~~~~~~~~~DvwSlGvil~ell~G~~pf~~~~~~~~~~~i~~~~g~p 359 (492)
+...... .......|+..|+|||++.+. .++.++|+|||||++|+|++|..||...+.......+....+
T Consensus 149 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~-~~~~~~Dv~slG~~~~~l~~g~~p~~~~~~~~~~~~~~~~~~-- 225 (265)
T cd06631 149 ARRLAWVGLHGTHSNMLKSMHGTPYWMAPEVINES-GYGRKSDIWSIGCTVFEMATGKPPLASMDRLAAMFYIGAHRG-- 225 (265)
T ss_pred hHhhhhccccccccccccccCCCccccChhhhcCC-CCcchhhHHHHHHHHHHHHhCCCccccCChHHHHHHhhhccC--
Confidence 8754211 112245688999999998654 488999999999999999999999987655444333322100
Q ss_pred CHHHHhhcCCCCcccCCCcccCCCcccccCCCCChhHhhhhccccccCCCCcCCHHHhhCCCCC
Q 011138 360 TREEIKCMNPNYTEFKFPQIKAHPWHKIFHKRMPPEALDLVSRLLQYSPSLRCTALEACAHPFF 423 (492)
Q Consensus 360 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~Li~~~L~~dP~~R~t~~e~l~Hp~f 423 (492)
..+. ++..++.++.+||++||..||.+||++.++++||||
T Consensus 226 ---------------~~~~---------~~~~~~~~~~~~i~~~l~~~p~~Rp~~~~~l~~~~~ 265 (265)
T cd06631 226 ---------------LMPR---------LPDSFSAAAIDFVTSCLTRDQHERPSALQLLRHDFL 265 (265)
T ss_pred ---------------CCCC---------CCCCCCHHHHHHHHHHhcCCcccCCCHHHHhcCCCC
Confidence 0111 223578999999999999999999999999999998
No 216
>cd06658 STKc_PAK5 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 5. Serine/threonine kinases (STKs), p21-activated kinase (PAK) 5, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK5 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK5 is mainly express
Probab=100.00 E-value=3e-41 Score=332.21 Aligned_cols=255 Identities=27% Similarity=0.407 Sum_probs=203.5
Q ss_pred ceeEeeeeccCCceEEEEEEEcCCCCEEEEEEeccc----hhhHHHHHHHHHHcCCCCccccceeeeeccCCCceEEEEE
Q 011138 138 SYMAERVVGTGSFGVVFQAKCLETGDSVAIKKVLQD----KRYKNRELQIMRLLNHPNVVSLKHCFFSTTEKDELYLNLV 213 (492)
Q Consensus 138 ~y~~~~~lG~G~fg~Vy~~~~~~~g~~vAiK~~~~~----~~~~~~E~~il~~l~h~nIv~l~~~~~~~~~~~~~~~~lV 213 (492)
.|.....||+|+||.||++.+..++..||||.+... .....+|+.+++.++|+||+++++.+. ...+.|+|
T Consensus 23 ~~~~~~~lg~g~~g~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~e~~~l~~l~h~~ii~~~~~~~-----~~~~~~lv 97 (292)
T cd06658 23 YLDSFIKIGEGSTGIVCIATEKHTGKQVAVKKMDLRKQQRRELLFNEVVIMRDYHHENVVDMYNSYL-----VGDELWVV 97 (292)
T ss_pred HHhhhhcccCCCCeEEEEEEECCCCCEEEEEEEecchHHHHHHHHHHHHHHHhCCCCcHHHHHHhee-----cCCeEEEE
Confidence 355567799999999999999999999999987542 233457999999999999999999883 34468999
Q ss_pred eeechhhHHHHhhhhhhcCCCcCHHHHHHHHHHHHHHHHHHHhhCCcccCCCCCCceEEcCCCCcEEEeeecCccccCCC
Q 011138 214 LEYISETVYRVSKHYTRMNQHVPILYVQLYTYQICRALNYLHHVVGVCHRDIKPQNLLVNPHTHQLKICDFGSAKMLVPG 293 (492)
Q Consensus 214 ~E~~~~~l~~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~yLH~~~givHrDlKp~NILl~~~~~~vkL~DFG~a~~~~~~ 293 (492)
|||++++.+..... ...+++..+..++.||+.||.|||+ +||+||||||+||+++.++ .+||+|||++......
T Consensus 98 ~e~~~~~~L~~~~~----~~~l~~~~~~~~~~qi~~~l~~LH~-~~ivH~dlkp~Nill~~~~-~~kL~dfg~~~~~~~~ 171 (292)
T cd06658 98 MEFLEGGALTDIVT----HTRMNEEQIATVCLSVLRALSYLHN-QGVIHRDIKSDSILLTSDG-RIKLSDFGFCAQVSKE 171 (292)
T ss_pred EeCCCCCcHHHHHh----cCCCCHHHHHHHHHHHHHHHHHHHH-CCEeecCCCHHHEEEcCCC-CEEEccCcchhhcccc
Confidence 99998765543221 2457889999999999999999997 9999999999999999887 7999999998754322
Q ss_pred C-CCccceeccCccCchhhcCCCCCCcchhhHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCCHHHHhhcCCCCc
Q 011138 294 E-PNISYICSRYYRAPELIFGATEYTTAIDMWSIGCVLAELLLGQPLFPGESGVDQLVEIIKILGTPTREEIKCMNPNYT 372 (492)
Q Consensus 294 ~-~~~~~~gt~~y~aPE~~~~~~~~~~~~DvwSlGvil~ell~G~~pf~~~~~~~~~~~i~~~~g~p~~~~~~~~~~~~~ 372 (492)
. ......|+..|+|||.+.+. .++.++|+|||||++|||++|..||...+....+..+...+..
T Consensus 172 ~~~~~~~~~~~~y~aPE~~~~~-~~~~~~Dv~slGvil~el~~g~~p~~~~~~~~~~~~~~~~~~~-------------- 236 (292)
T cd06658 172 VPKRKSLVGTPYWMAPEVISRL-PYGTEVDIWSLGIMVIEMIDGEPPYFNEPPLQAMRRIRDNLPP-------------- 236 (292)
T ss_pred cccCceeecCccccCHHHHccC-CCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhcCCC--------------
Confidence 2 22345789999999998654 4889999999999999999999999887665544433221100
Q ss_pred ccCCCcccCCCcccccCCCCChhHhhhhccccccCCCCcCCHHHhhCCCCCCCCCCCC
Q 011138 373 EFKFPQIKAHPWHKIFHKRMPPEALDLVSRLLQYSPSLRCTALEACAHPFFDDLRDPN 430 (492)
Q Consensus 373 ~~~~~~~~~~~~~~~~~~~~s~~~~~Li~~~L~~dP~~R~t~~e~l~Hp~f~~~~~~~ 430 (492)
.++ ....++..+.+||.+||..||.+|||+.++++||||.....+.
T Consensus 237 --~~~----------~~~~~~~~~~~li~~~l~~~P~~Rpt~~~il~~~~~~~~~~~~ 282 (292)
T cd06658 237 --RVK----------DSHKVSSVLRGFLDLMLVREPSQRATAQELLQHPFLKLAGPPS 282 (292)
T ss_pred --ccc----------cccccCHHHHHHHHHHccCChhHCcCHHHHhhChhhhccCCcc
Confidence 000 0124688899999999999999999999999999999876554
No 217
>KOG0670 consensus U4/U6-associated splicing factor PRP4 [RNA processing and modification]
Probab=100.00 E-value=3.1e-42 Score=337.80 Aligned_cols=279 Identities=34% Similarity=0.568 Sum_probs=227.0
Q ss_pred ceeEeeeeccCCceEEEEEEEcCCCCEEEEEEeccchhhH---HHHHHHHHHcC------CCCccccceeeeeccCCCce
Q 011138 138 SYMAERVVGTGSFGVVFQAKCLETGDSVAIKKVLQDKRYK---NRELQIMRLLN------HPNVVSLKHCFFSTTEKDEL 208 (492)
Q Consensus 138 ~y~~~~~lG~G~fg~Vy~~~~~~~g~~vAiK~~~~~~~~~---~~E~~il~~l~------h~nIv~l~~~~~~~~~~~~~ 208 (492)
+|.+....|+|-|++|.+|.+...|..||||+|...+..- .+|++||++|+ --|+++|+.+| ....
T Consensus 433 RY~V~~~~GkGvFs~Vvra~D~~r~~~vAiKIIRnNE~M~KtGl~EleiLkKL~~AD~Edk~Hclrl~r~F-----~hkn 507 (752)
T KOG0670|consen 433 RYEVQGYTGKGVFSTVVRARDQARGQEVAIKIIRNNEVMHKTGLKELEILKKLNDADPEDKFHCLRLFRHF-----KHKN 507 (752)
T ss_pred eeEEEeccccceeeeeeeccccCCCCeeEEEEeecchHHhhhhhHHHHHHHHhhccCchhhhHHHHHHHHh-----hhcc
Confidence 6888889999999999999999999999999998765443 47999999996 34799999998 6666
Q ss_pred EEEEEeeechhhHHHHhhhhhhcCCCcCHHHHHHHHHHHHHHHHHHHhhCCcccCCCCCCceEEcCCCCcEEEeeecCcc
Q 011138 209 YLNLVLEYISETVYRVSKHYTRMNQHVPILYVQLYTYQICRALNYLHHVVGVCHRDIKPQNLLVNPHTHQLKICDFGSAK 288 (492)
Q Consensus 209 ~~~lV~E~~~~~l~~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~yLH~~~givHrDlKp~NILl~~~~~~vkL~DFG~a~ 288 (492)
++|||+|-+.-.|-.+++.+.. +-.+.+..++.|+.|+..||..|.. .||+|.||||+||||+.....+||||||.|.
T Consensus 508 HLClVFE~LslNLRevLKKyG~-nvGL~ikaVRsYaqQLflALklLK~-c~vlHaDIKPDNiLVNE~k~iLKLCDfGSA~ 585 (752)
T KOG0670|consen 508 HLCLVFEPLSLNLREVLKKYGR-NVGLHIKAVRSYAQQLFLALKLLKK-CGVLHADIKPDNILVNESKNILKLCDFGSAS 585 (752)
T ss_pred eeEEEehhhhchHHHHHHHhCc-ccceeehHHHHHHHHHHHHHHHHHh-cCeeecccCccceEeccCcceeeeccCcccc
Confidence 7999999999999888888765 4568888999999999999999997 8999999999999999888889999999997
Q ss_pred ccCCCCCCccceeccCccCchhhcCCCCCCcchhhHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCCHHHHhhc-
Q 011138 289 MLVPGEPNISYICSRYYRAPELIFGATEYTTAIDMWSIGCVLAELLLGQPLFPGESGVDQLVEIIKILGTPTREEIKCM- 367 (492)
Q Consensus 289 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DvwSlGvil~ell~G~~pf~~~~~~~~~~~i~~~~g~p~~~~~~~~- 367 (492)
.... ...+.+..+..|.|||+|+|-. |+...|+||+||+||||.||+..|+|.++.+.+...+.+.|..+...+...
T Consensus 586 ~~~e-neitPYLVSRFYRaPEIiLG~~-yd~~iD~WSvgctLYElYtGkIlFpG~TNN~MLrl~me~KGk~p~KmlRKgq 663 (752)
T KOG0670|consen 586 FASE-NEITPYLVSRFYRAPEIILGLP-YDYPIDTWSVGCTLYELYTGKILFPGRTNNQMLRLFMELKGKFPNKMLRKGQ 663 (752)
T ss_pred cccc-ccccHHHHHHhccCcceeecCc-ccCCccceeeceeeEEeeccceecCCCCcHHHHHHHHHhcCCCcHHHhhhcc
Confidence 6543 3455677889999999999865 999999999999999999999999999999999999999998887766421
Q ss_pred ------C--CCCcccCCCcccC----------CC---ccccc--CCCCC-------hhHhhhhccccccCCCCcCCHHHh
Q 011138 368 ------N--PNYTEFKFPQIKA----------HP---WHKIF--HKRMP-------PEALDLVSRLLQYSPSLRCTALEA 417 (492)
Q Consensus 368 ------~--~~~~~~~~~~~~~----------~~---~~~~~--~~~~s-------~~~~~Li~~~L~~dP~~R~t~~e~ 417 (492)
. -+|.-.....+.. .| +...+ ...++ ..+++||.+||..||++|+|..|+
T Consensus 664 F~dqHFD~d~nf~~~e~D~vT~r~~~~vm~~vkPtkdl~s~l~~~q~~~deq~~~~~~~rdLLdkml~LdP~KRit~nqA 743 (752)
T KOG0670|consen 664 FKDQHFDQDLNFLYIEVDKVTEREKRTVMVNVKPTKDLGSELIAVQRLPDEQPKIVQQLRDLLDKMLILDPEKRITVNQA 743 (752)
T ss_pred hhhhhcccccceEEEeccccccceeEEEecccCcchhHHHHHhccCCCCchhHHHHHHHHHHHHHHhccChhhcCCHHHH
Confidence 1 1111000000000 00 00000 01122 258899999999999999999999
Q ss_pred hCCCCCCC
Q 011138 418 CAHPFFDD 425 (492)
Q Consensus 418 l~Hp~f~~ 425 (492)
|.||||+.
T Consensus 744 L~HpFi~~ 751 (752)
T KOG0670|consen 744 LKHPFITE 751 (752)
T ss_pred hcCCcccC
Confidence 99999974
No 218
>cd06632 STKc_MEKK1_plant Catalytic domain of the Protein Serine/Threonine Kinase, Plant MAP/ERK kinase kinase 1. Serine/threonine kinases (STKs), plant MAP/ERK kinase kinase 1 (MEKK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The plant MEKK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of plant mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks) including Arabidopsis thaliana MEKK1 and MAPKKK3. MEKK1 is a MAPKKK that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Arabidops
Probab=100.00 E-value=8.2e-41 Score=321.81 Aligned_cols=248 Identities=34% Similarity=0.539 Sum_probs=200.7
Q ss_pred ceeEeeeeccCCceEEEEEEEcCCCCEEEEEEeccch---------hhHHHHHHHHHHcCCCCccccceeeeeccCCCce
Q 011138 138 SYMAERVVGTGSFGVVFQAKCLETGDSVAIKKVLQDK---------RYKNRELQIMRLLNHPNVVSLKHCFFSTTEKDEL 208 (492)
Q Consensus 138 ~y~~~~~lG~G~fg~Vy~~~~~~~g~~vAiK~~~~~~---------~~~~~E~~il~~l~h~nIv~l~~~~~~~~~~~~~ 208 (492)
+|...+.||+|+||.||+|.+..++..|++|.+.... ....+|+.+++.++|+||+++++++ .+..
T Consensus 1 ~~~~~~~ig~g~~~~vy~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~-----~~~~ 75 (258)
T cd06632 1 RWRKGELLGSGSFGSVYEGLNLDDGDFFAVKEVSLADDGQTGQEAVKQLEQEIALLSKLQHPNIVQYLGTE-----REED 75 (258)
T ss_pred CccccceeeecCCceEEEEEEcCCCcEEEEEEEEEccccccchHHHHHHHHHHHHHHhcCCCCchheeeeE-----ecCC
Confidence 3778889999999999999998899999999874322 3355799999999999999999987 4445
Q ss_pred EEEEEeeechhh-HHHHhhhhhhcCCCcCHHHHHHHHHHHHHHHHHHHhhCCcccCCCCCCceEEcCCCCcEEEeeecCc
Q 011138 209 YLNLVLEYISET-VYRVSKHYTRMNQHVPILYVQLYTYQICRALNYLHHVVGVCHRDIKPQNLLVNPHTHQLKICDFGSA 287 (492)
Q Consensus 209 ~~~lV~E~~~~~-l~~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~yLH~~~givHrDlKp~NILl~~~~~~vkL~DFG~a 287 (492)
.+++||||++++ +...+. ....+++..+..++.||+.||.|||+ .||+|+||+|+||+++.++ .+||+|||++
T Consensus 76 ~~~lv~e~~~~~~L~~~~~----~~~~~~~~~~~~~~~~i~~~l~~lH~-~~i~H~dl~~~ni~~~~~~-~~kl~d~~~~ 149 (258)
T cd06632 76 NLYIFLELVPGGSLAKLLK----KYGSFPEPVIRLYTRQILLGLEYLHD-RNTVHRDIKGANILVDTNG-VVKLADFGMA 149 (258)
T ss_pred eEEEEEEecCCCcHHHHHH----hcCCCCHHHHHHHHHHHHHHHHHHHH-CCcccCCCCHHHEEECCCC-CEEEccCccc
Confidence 688999999864 433332 23457888899999999999999997 9999999999999999887 7999999998
Q ss_pred cccCCCCCCccceeccCccCchhhcCCCCCCcchhhHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCCHHHHhhc
Q 011138 288 KMLVPGEPNISYICSRYYRAPELIFGATEYTTAIDMWSIGCVLAELLLGQPLFPGESGVDQLVEIIKILGTPTREEIKCM 367 (492)
Q Consensus 288 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DvwSlGvil~ell~G~~pf~~~~~~~~~~~i~~~~g~p~~~~~~~~ 367 (492)
.............|+..|+|||.+.....++.++|+|||||++|+|++|..||......+....+....
T Consensus 150 ~~~~~~~~~~~~~~~~~y~~pe~~~~~~~~~~~~D~~slG~~l~~l~~g~~pf~~~~~~~~~~~~~~~~----------- 218 (258)
T cd06632 150 KQVVEFSFAKSFKGSPYWMAPEVIAQQGGYGLAADIWSLGCTVLEMATGKPPWSQLEGVAAVFKIGRSK----------- 218 (258)
T ss_pred eeccccccccccCCCcceeCHHHhcCCCCCCchhhhHHHHHHHHHHHhCCCCcccCcHHHHHHHHHhcc-----------
Confidence 766444434456789999999998654448899999999999999999999997766444443332210
Q ss_pred CCCCcccCCCcccCCCcccccCCCCChhHhhhhccccccCCCCcCCHHHhhCCCCC
Q 011138 368 NPNYTEFKFPQIKAHPWHKIFHKRMPPEALDLVSRLLQYSPSLRCTALEACAHPFF 423 (492)
Q Consensus 368 ~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~Li~~~L~~dP~~R~t~~e~l~Hp~f 423 (492)
..+ .++..+++++.+||.+||+.||.+||++.+++.|||+
T Consensus 219 -------~~~---------~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~~l~~~~~ 258 (258)
T cd06632 219 -------ELP---------PIPDHLSDEAKDFILKCLQRDPSLRPTAAELLEHPFV 258 (258)
T ss_pred -------cCC---------CcCCCcCHHHHHHHHHHhhcCcccCcCHHHHhcCCCC
Confidence 000 1223578999999999999999999999999999997
No 219
>cd05578 STKc_Yank1 Catalytic domain of the Protein Serine/Threonine Kinase, Yank1. Serine/Threonine Kinases (STKs), Yank1 or STK32A subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Yank1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily contains uncharacterized STKs with similarity to the human protein designated Yank1 or STK32A.
Probab=100.00 E-value=5.4e-41 Score=323.75 Aligned_cols=247 Identities=30% Similarity=0.465 Sum_probs=202.2
Q ss_pred ceeEeeeeccCCceEEEEEEEcCCCCEEEEEEeccc-------hhhHHHHHHHHHHcCCCCccccceeeeeccCCCceEE
Q 011138 138 SYMAERVVGTGSFGVVFQAKCLETGDSVAIKKVLQD-------KRYKNRELQIMRLLNHPNVVSLKHCFFSTTEKDELYL 210 (492)
Q Consensus 138 ~y~~~~~lG~G~fg~Vy~~~~~~~g~~vAiK~~~~~-------~~~~~~E~~il~~l~h~nIv~l~~~~~~~~~~~~~~~ 210 (492)
+|.+.+.||.|+||.||+|.+..+++.||+|.+.+. .....+|+++++.++||||+++++++ .+..++
T Consensus 1 ~y~~~~~i~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~-----~~~~~~ 75 (258)
T cd05578 1 HFELLRVIGKGAFGKVCIVQKRDTKKMFAMKYMNKQKCVEKGSVRNVLNERRILQELNHPFLVNLWYSF-----QDEENM 75 (258)
T ss_pred CceEEEEeccCCCceEEEEEEccCCcEEEEEEEehhhhcchhHHHHHHHHHHHHHhCCCCChHHHHHhh-----cCCCeE
Confidence 489999999999999999999999999999988543 23445799999999999999999988 555679
Q ss_pred EEEeeechhhHHHHhhhhhhcCCCcCHHHHHHHHHHHHHHHHHHHhhCCcccCCCCCCceEEcCCCCcEEEeeecCcccc
Q 011138 211 NLVLEYISETVYRVSKHYTRMNQHVPILYVQLYTYQICRALNYLHHVVGVCHRDIKPQNLLVNPHTHQLKICDFGSAKML 290 (492)
Q Consensus 211 ~lV~E~~~~~l~~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~yLH~~~givHrDlKp~NILl~~~~~~vkL~DFG~a~~~ 290 (492)
++|+||+.++.+.... .....+++..+..++.||+.||.|||+ +||+|+||||+||+++.++ .++|+|||++...
T Consensus 76 ~lv~e~~~~~~L~~~l---~~~~~l~~~~~~~~~~~i~~~l~~lh~-~~i~h~dl~~~nil~~~~~-~~~l~d~~~~~~~ 150 (258)
T cd05578 76 YLVVDLLLGGDLRYHL---SQKVKFSEEQVKFWICEIVLALEYLHS-KGIIHRDIKPDNILLDEQG-HVHITDFNIATKV 150 (258)
T ss_pred EEEEeCCCCCCHHHHH---HhcCCcCHHHHHHHHHHHHHHHHHHHh-CCeeccCCCHHHeEEcCCC-CEEEeeccccccc
Confidence 9999999875443221 112578899999999999999999997 8999999999999999888 7999999999876
Q ss_pred CCCCCCccceeccCccCchhhcCCCCCCcchhhHHHHHHHHHHHhCCCCCCCCCh--HHHHHHHHHHhCCCCHHHHhhcC
Q 011138 291 VPGEPNISYICSRYYRAPELIFGATEYTTAIDMWSIGCVLAELLLGQPLFPGESG--VDQLVEIIKILGTPTREEIKCMN 368 (492)
Q Consensus 291 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DvwSlGvil~ell~G~~pf~~~~~--~~~~~~i~~~~g~p~~~~~~~~~ 368 (492)
..........|+..|+|||.+.+.. ++.++|+|||||++|+|++|..||...+. .+.+..... .
T Consensus 151 ~~~~~~~~~~~~~~y~~PE~~~~~~-~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~~~~~~~~~~---~---------- 216 (258)
T cd05578 151 TPDTLTTSTSGTPGYMAPEVLCRQG-YSVAVDWWSLGVTAYECLRGKRPYRGHSRTIRDQIRAKQE---T---------- 216 (258)
T ss_pred CCCccccccCCChhhcCHHHHcccC-CCCcccchhhHHHHHHHHhCCCCCCCCCccHHHHHHHHhc---c----------
Confidence 5544445567889999999986544 89999999999999999999999987764 222222111 0
Q ss_pred CCCcccCCCcccCCCcccccCCCCChhHhhhhccccccCCCCcCCH--HHhhCCCCC
Q 011138 369 PNYTEFKFPQIKAHPWHKIFHKRMPPEALDLVSRLLQYSPSLRCTA--LEACAHPFF 423 (492)
Q Consensus 369 ~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~Li~~~L~~dP~~R~t~--~e~l~Hp~f 423 (492)
....++..++.++.++|.+||..||.+||++ .|+++||||
T Consensus 217 ---------------~~~~~~~~~~~~~~~~i~~~l~~~p~~R~~~~~~~l~~~~~~ 258 (258)
T cd05578 217 ---------------ADVLYPATWSTEAIDAINKLLERDPQKRLGDNLKDLKNHPYF 258 (258)
T ss_pred ---------------ccccCcccCcHHHHHHHHHHccCChhHcCCccHHHHhcCCCC
Confidence 0011224568999999999999999999999 999999998
No 220
>KOG0696 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=2.8e-42 Score=329.77 Aligned_cols=254 Identities=28% Similarity=0.447 Sum_probs=211.5
Q ss_pred cccceeEeeeeccCCceEEEEEEEcCCCCEEEEEEeccchhh-------HHHHHHHHHHcC-CCCccccceeeeeccCCC
Q 011138 135 QTISYMAERVVGTGSFGVVFQAKCLETGDSVAIKKVLQDKRY-------KNRELQIMRLLN-HPNVVSLKHCFFSTTEKD 206 (492)
Q Consensus 135 ~~~~y~~~~~lG~G~fg~Vy~~~~~~~g~~vAiK~~~~~~~~-------~~~E~~il~~l~-h~nIv~l~~~~~~~~~~~ 206 (492)
...+|....+||+|+||.|.+|..+.+.+.||||+++++.-. ...|.++|.... -|.+++++.||. .
T Consensus 347 ~~tDFnFl~VlGKGSFGKVlLaerkgtdELyAiKiLkKDViiQdDDvectm~EKrvLAL~~kppFL~qlHScFQ-----T 421 (683)
T KOG0696|consen 347 KATDFNFLMVLGKGSFGKVLLAERKGTDELYAIKILKKDVIIQDDDVECTMVEKRVLALPGKPPFLVQLHSCFQ-----T 421 (683)
T ss_pred eecccceEEEeccCccceeeeecccCcchhhhhhhhccceeeecCcccceehhhhheecCCCCchHHHHHHHhh-----h
Confidence 334688999999999999999999999999999988665321 235778887765 678899999983 3
Q ss_pred ceEEEEEeeechhhHHHHhhhhhhcCCCcCHHHHHHHHHHHHHHHHHHHhhCCcccCCCCCCceEEcCCCCcEEEeeecC
Q 011138 207 ELYLNLVLEYISETVYRVSKHYTRMNQHVPILYVQLYTYQICRALNYLHHVVGVCHRDIKPQNLLVNPHTHQLKICDFGS 286 (492)
Q Consensus 207 ~~~~~lV~E~~~~~l~~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~yLH~~~givHrDlKp~NILl~~~~~~vkL~DFG~ 286 (492)
-..+|+||||+.|+-+ +.+. ..-..+.+..+.+|+.+|+-||-|||+ +|||+||||.+|||++.++ .|||+|||+
T Consensus 422 mDRLyFVMEyvnGGDL--Myhi-QQ~GkFKEp~AvFYAaEiaigLFFLh~-kgIiYRDLKLDNvmLd~eG-HiKi~DFGm 496 (683)
T KOG0696|consen 422 MDRLYFVMEYVNGGDL--MYHI-QQVGKFKEPVAVFYAAEIAIGLFFLHS-KGIIYRDLKLDNVMLDSEG-HIKIADFGM 496 (683)
T ss_pred hhheeeEEEEecCchh--hhHH-HHhcccCCchhhhhhHHHHHHhhhhhc-CCeeeeeccccceEeccCC-ceEeeeccc
Confidence 3458999999997632 2222 234568888899999999999999997 9999999999999999999 599999999
Q ss_pred ccccC-CCCCCccceeccCccCchhhcCCCCCCcchhhHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCCHHHHh
Q 011138 287 AKMLV-PGEPNISYICSRYYRAPELIFGATEYTTAIDMWSIGCVLAELLLGQPLFPGESGVDQLVEIIKILGTPTREEIK 365 (492)
Q Consensus 287 a~~~~-~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DvwSlGvil~ell~G~~pf~~~~~~~~~~~i~~~~g~p~~~~~~ 365 (492)
++.-. .+....+++|||.|+|||++. ..+|+..+|+||+||+|||||.|++||.+++..+.+..|+..
T Consensus 497 cKEni~~~~TTkTFCGTPdYiAPEIi~-YqPYgksvDWWa~GVLLyEmlaGQpPFdGeDE~elF~aI~eh---------- 565 (683)
T KOG0696|consen 497 CKENIFDGVTTKTFCGTPDYIAPEIIA-YQPYGKSVDWWAFGVLLYEMLAGQPPFDGEDEDELFQAIMEH---------- 565 (683)
T ss_pred ccccccCCcceeeecCCCcccccceEE-ecccccchhHHHHHHHHHHHHcCCCCCCCCCHHHHHHHHHHc----------
Confidence 97643 344456799999999999995 456999999999999999999999999999999988888762
Q ss_pred hcCCCCcccCCCcccCCCcccccCCCCChhHhhhhccccccCCCCcCCH-----HHhhCCCCCCCCCC
Q 011138 366 CMNPNYTEFKFPQIKAHPWHKIFHKRMPPEALDLVSRLLQYSPSLRCTA-----LEACAHPFFDDLRD 428 (492)
Q Consensus 366 ~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~Li~~~L~~dP~~R~t~-----~e~l~Hp~f~~~~~ 428 (492)
... +++.+|.++.++++.+|.+.|.+|+.. .+|-.||||+.+..
T Consensus 566 -------nvs------------yPKslSkEAv~ickg~ltK~P~kRLGcg~~ge~di~~H~FFR~iDW 614 (683)
T KOG0696|consen 566 -------NVS------------YPKSLSKEAVAICKGLLTKHPGKRLGCGPEGERDIREHPFFRRIDW 614 (683)
T ss_pred -------cCc------------CcccccHHHHHHHHHHhhcCCccccCCCCccccchhhCcchhhccH
Confidence 222 456799999999999999999999854 58999999997664
No 221
>cd06645 STKc_MAP4K3 Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-activated protein kinase kinase kinase kinase 3. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 3 (MAPKKKK3 or MAP4K3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Each MAPK cascade is activated
Probab=100.00 E-value=3.9e-41 Score=326.44 Aligned_cols=251 Identities=24% Similarity=0.387 Sum_probs=197.7
Q ss_pred cceeEeeeeccCCceEEEEEEEcCCCCEEEEEEeccch----hhHHHHHHHHHHcCCCCccccceeeeeccCCCceEEEE
Q 011138 137 ISYMAERVVGTGSFGVVFQAKCLETGDSVAIKKVLQDK----RYKNRELQIMRLLNHPNVVSLKHCFFSTTEKDELYLNL 212 (492)
Q Consensus 137 ~~y~~~~~lG~G~fg~Vy~~~~~~~g~~vAiK~~~~~~----~~~~~E~~il~~l~h~nIv~l~~~~~~~~~~~~~~~~l 212 (492)
.+|.+.+.||+|+||.||+|.+..+++.||+|.+.... ....+|+.+++.++||||+++++++. +..++|+
T Consensus 9 ~~~~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~e~~~~~~l~h~~ii~~~~~~~-----~~~~~~l 83 (267)
T cd06645 9 EDFELIQRIGSGTYGDVYKARNVNTGELAAIKVIKLEPGEDFAVVQQEIIMMKDCKHSNIVAYFGSYL-----RRDKLWI 83 (267)
T ss_pred HHHHHHHHhCCCCCeEEEEEEEcCCCcEEEEEEEecCchhHHHHHHHHHHHHHhCCCCCeeeEEEEEE-----eCCEEEE
Confidence 36999999999999999999999999999999875432 23457999999999999999999883 3446899
Q ss_pred Eeeechhh-HHHHhhhhhhcCCCcCHHHHHHHHHHHHHHHHHHHhhCCcccCCCCCCceEEcCCCCcEEEeeecCccccC
Q 011138 213 VLEYISET-VYRVSKHYTRMNQHVPILYVQLYTYQICRALNYLHHVVGVCHRDIKPQNLLVNPHTHQLKICDFGSAKMLV 291 (492)
Q Consensus 213 V~E~~~~~-l~~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~yLH~~~givHrDlKp~NILl~~~~~~vkL~DFG~a~~~~ 291 (492)
||||++++ +.+.+. ....+++..++.++.||+.||.|||+ .||+|+||||+||+++.++ .+||+|||++....
T Consensus 84 v~e~~~~~~L~~~~~----~~~~~~~~~~~~~~~~i~~~l~~lH~-~~i~H~dlkp~nili~~~~-~~~l~dfg~~~~~~ 157 (267)
T cd06645 84 CMEFCGGGSLQDIYH----VTGPLSESQIAYVSRETLQGLYYLHS-KGKMHRDIKGANILLTDNG-HVKLADFGVSAQIT 157 (267)
T ss_pred EEeccCCCcHHHHHH----hcCCCCHHHHHHHHHHHHHHHHHHHH-CCeecCCCCHHHEEECCCC-CEEECcceeeeEcc
Confidence 99999864 444332 24568899999999999999999997 8999999999999999877 79999999987553
Q ss_pred CCC-CCccceeccCccCchhhc--CCCCCCcchhhHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCCHHHHhhcC
Q 011138 292 PGE-PNISYICSRYYRAPELIF--GATEYTTAIDMWSIGCVLAELLLGQPLFPGESGVDQLVEIIKILGTPTREEIKCMN 368 (492)
Q Consensus 292 ~~~-~~~~~~gt~~y~aPE~~~--~~~~~~~~~DvwSlGvil~ell~G~~pf~~~~~~~~~~~i~~~~g~p~~~~~~~~~ 368 (492)
... ......|+..|+|||++. ....++.++|+|||||++|+|++|..||........+..+...
T Consensus 158 ~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~DvwSlG~il~~l~~~~~p~~~~~~~~~~~~~~~~------------- 224 (267)
T cd06645 158 ATIAKRKSFIGTPYWMAPEVAAVERKGGYNQLCDIWAVGITAIELAELQPPMFDLHPMRALFLMTKS------------- 224 (267)
T ss_pred CcccccccccCcccccChhhhccccCCCCCchhhhHHHHHHHHHHhcCCCCcccccchhhHHhhhcc-------------
Confidence 221 223457899999999974 2334788999999999999999999999765543333222110
Q ss_pred CCCcccCCCcccCCCcccccCCCCChhHhhhhccccccCCCCcCCHHHhhCCCC
Q 011138 369 PNYTEFKFPQIKAHPWHKIFHKRMPPEALDLVSRLLQYSPSLRCTALEACAHPF 422 (492)
Q Consensus 369 ~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~Li~~~L~~dP~~R~t~~e~l~Hp~ 422 (492)
....+... ....++..+.+||.+||+.||++||++.++++|||
T Consensus 225 ----~~~~~~~~-------~~~~~~~~~~~li~~~l~~~P~~R~~~~~ll~~~~ 267 (267)
T cd06645 225 ----NFQPPKLK-------DKMKWSNSFHHFVKMALTKNPKKRPTAEKLLQHPF 267 (267)
T ss_pred ----CCCCCccc-------ccCCCCHHHHHHHHHHccCCchhCcCHHHHhcCCC
Confidence 00000000 00136788999999999999999999999999999
No 222
>cd08217 STKc_Nek2 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 2. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 2 (Nek2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek2 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The Nek2 subfamily includes Aspergillus nidulans NIMA kinase, the founding member of the Nek family, which was identified in a screen for cell cycle mutants prevented from entering mitosis. NIMA is essential for mitotic entry and progression through mitosis, and its degradation is essential for mitotic exi
Probab=100.00 E-value=1.5e-40 Score=320.93 Aligned_cols=252 Identities=26% Similarity=0.428 Sum_probs=204.1
Q ss_pred ceeEeeeeccCCceEEEEEEEcCCCCEEEEEEeccc------hhhHHHHHHHHHHcCCCCccccceeeeeccCCCceEEE
Q 011138 138 SYMAERVVGTGSFGVVFQAKCLETGDSVAIKKVLQD------KRYKNRELQIMRLLNHPNVVSLKHCFFSTTEKDELYLN 211 (492)
Q Consensus 138 ~y~~~~~lG~G~fg~Vy~~~~~~~g~~vAiK~~~~~------~~~~~~E~~il~~l~h~nIv~l~~~~~~~~~~~~~~~~ 211 (492)
+|.+.+.||.|+||.||+|.+..+|+.||+|.+... .....+|+.+++.++|+||+++++++.. .....++
T Consensus 1 ~y~~~~~lg~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~---~~~~~~~ 77 (265)
T cd08217 1 DYEVLETIGKGSFGTVRKVRRKSDGKILVWKEIDYGNMTEKEKQQLVSEVNILRELKHPNIVRYYDRIID---RSNQTLY 77 (265)
T ss_pred CceeeeeeccCCCeEEEEeeecCCCCEEEEEEEecccCCHHHHHHHHHHHHHHHhcCCCccceeeeeeec---CCCCEEE
Confidence 488999999999999999999999999999987532 2234469999999999999999987753 2334578
Q ss_pred EEeeechh-hHHHHhhhhhhcCCCcCHHHHHHHHHHHHHHHHHHH-----hhCCcccCCCCCCceEEcCCCCcEEEeeec
Q 011138 212 LVLEYISE-TVYRVSKHYTRMNQHVPILYVQLYTYQICRALNYLH-----HVVGVCHRDIKPQNLLVNPHTHQLKICDFG 285 (492)
Q Consensus 212 lV~E~~~~-~l~~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~yLH-----~~~givHrDlKp~NILl~~~~~~vkL~DFG 285 (492)
+||||+++ ++...+.........+++..++.++.||+.||.||| + .+|+|+||||+||+++.++ .+||+|||
T Consensus 78 ~~~e~~~~~~L~~~l~~~~~~~~~l~~~~~~~~~~~i~~~l~~lH~~~~~~-~~i~h~dl~p~nili~~~~-~~kl~d~g 155 (265)
T cd08217 78 IVMEYCEGGDLAQLIQKCKKERKYIEEEFIWRILTQLLLALYECHNRSDPG-NTVLHRDLKPANIFLDANN-NVKLGDFG 155 (265)
T ss_pred EEehhccCCCHHHHHHHHhhcccCCCHHHHHHHHHHHHHHHHHHhcCcccc-CcceecCCCHHHEEEecCC-CEEEeccc
Confidence 99999986 455555444444567899999999999999999999 7 7999999999999999877 89999999
Q ss_pred CccccCCCCC-CccceeccCccCchhhcCCCCCCcchhhHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCCHHHH
Q 011138 286 SAKMLVPGEP-NISYICSRYYRAPELIFGATEYTTAIDMWSIGCVLAELLLGQPLFPGESGVDQLVEIIKILGTPTREEI 364 (492)
Q Consensus 286 ~a~~~~~~~~-~~~~~gt~~y~aPE~~~~~~~~~~~~DvwSlGvil~ell~G~~pf~~~~~~~~~~~i~~~~g~p~~~~~ 364 (492)
++........ .....+++.|+|||.+.+.. ++.++|+|||||++|+|++|..||...+.......+..
T Consensus 156 ~~~~~~~~~~~~~~~~~~~~~~~pE~~~~~~-~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~~~~~~~---------- 224 (265)
T cd08217 156 LAKILGHDSSFAKTYVGTPYYMSPEQLNHMS-YDEKSDIWSLGCLIYELCALSPPFTARNQLQLASKIKE---------- 224 (265)
T ss_pred ccccccCCcccccccccCCCccChhhhcCCC-CCchhHHHHHHHHHHHHHHCCCcccCcCHHHHHHHHhc----------
Confidence 9987654433 33467899999999986544 88999999999999999999999988764333332211
Q ss_pred hhcCCCCcccCCCcccCCCcccccCCCCChhHhhhhccccccCCCCcCCHHHhhCCCCC
Q 011138 365 KCMNPNYTEFKFPQIKAHPWHKIFHKRMPPEALDLVSRLLQYSPSLRCTALEACAHPFF 423 (492)
Q Consensus 365 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~Li~~~L~~dP~~R~t~~e~l~Hp~f 423 (492)
..++ .++...+.++.+|+.+||..||.+||++.++++|||+
T Consensus 225 ---------~~~~---------~~~~~~~~~~~~l~~~~l~~~p~~Rp~~~~il~~~~~ 265 (265)
T cd08217 225 ---------GKFR---------RIPYRYSSELNEVIKSMLNVDPDKRPSTEELLQLPLI 265 (265)
T ss_pred ---------CCCC---------CCccccCHHHHHHHHHHccCCcccCCCHHHHhhCCCC
Confidence 0011 1223568899999999999999999999999999996
No 223
>cd06612 STKc_MST1_2 Catalytic domain of the Protein Serine/Threonine Kinases, Mammalian Ste20-like protein kinase 1 and 2. Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 1 (MST1) and MST2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST1/2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MST1, MST2, and related proteins including Drosophila Hippo and Dictyostelium discoideum Krs1 (kinase responsive to stress 1). MST1/2 and Hippo are involved in a conserved pathway that governs cell contact inhibition, organ size control, and tumor development. MST1 activates the mitogen-activated protein kinases (MAPKs) p38 and c-Jun N-terminal kinase (JNK) through MKK7 (a
Probab=100.00 E-value=7.2e-41 Score=322.02 Aligned_cols=251 Identities=28% Similarity=0.411 Sum_probs=201.7
Q ss_pred cceeEeeeeccCCceEEEEEEEcCCCCEEEEEEeccch--hhHHHHHHHHHHcCCCCccccceeeeeccCCCceEEEEEe
Q 011138 137 ISYMAERVVGTGSFGVVFQAKCLETGDSVAIKKVLQDK--RYKNRELQIMRLLNHPNVVSLKHCFFSTTEKDELYLNLVL 214 (492)
Q Consensus 137 ~~y~~~~~lG~G~fg~Vy~~~~~~~g~~vAiK~~~~~~--~~~~~E~~il~~l~h~nIv~l~~~~~~~~~~~~~~~~lV~ 214 (492)
.+|.+.+.||+|+||.||+|.+..++..|++|.+.... ....+|+.+++.++|+||+++++++. +..++|+|+
T Consensus 3 ~~y~~~~~i~~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~e~~~~~~l~~~~i~~~~~~~~-----~~~~~~l~~ 77 (256)
T cd06612 3 EVFDILEKLGEGSYGSVYKAIHKETGQVVAIKVVPVEEDLQEIIKEISILKQCDSPYIVKYYGSYF-----KNTDLWIVM 77 (256)
T ss_pred ccchhhhhhcCCCCeEEEEEEEcCCCcEEEEEEeecHHHHHHHHHHHHHHHhCCCCcEeeeeeeee-----cCCcEEEEE
Confidence 35999999999999999999999889999999886543 45568999999999999999999884 345689999
Q ss_pred eechhhHHHHhhhhhhcCCCcCHHHHHHHHHHHHHHHHHHHhhCCcccCCCCCCceEEcCCCCcEEEeeecCccccCCCC
Q 011138 215 EYISETVYRVSKHYTRMNQHVPILYVQLYTYQICRALNYLHHVVGVCHRDIKPQNLLVNPHTHQLKICDFGSAKMLVPGE 294 (492)
Q Consensus 215 E~~~~~l~~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~yLH~~~givHrDlKp~NILl~~~~~~vkL~DFG~a~~~~~~~ 294 (492)
||++++.+.... ......+++..+..++.||+.||.|||+ .||+||||+|+||+++.++ .+||+|||++.......
T Consensus 78 e~~~~~~L~~~l--~~~~~~l~~~~~~~~~~~l~~~l~~lh~-~~i~H~dl~~~ni~~~~~~-~~~l~dfg~~~~~~~~~ 153 (256)
T cd06612 78 EYCGAGSVSDIM--KITNKTLTEEEIAAILYQTLKGLEYLHS-NKKIHRDIKAGNILLNEEG-QAKLADFGVSGQLTDTM 153 (256)
T ss_pred ecCCCCcHHHHH--HhCccCCCHHHHHHHHHHHHHHHHHHHH-CCcccCCCCcceEEECCCC-cEEEcccccchhcccCc
Confidence 999975443221 2224568899999999999999999997 8999999999999999887 79999999998664333
Q ss_pred -CCccceeccCccCchhhcCCCCCCcchhhHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCCHHHHhhcCCCCcc
Q 011138 295 -PNISYICSRYYRAPELIFGATEYTTAIDMWSIGCVLAELLLGQPLFPGESGVDQLVEIIKILGTPTREEIKCMNPNYTE 373 (492)
Q Consensus 295 -~~~~~~gt~~y~aPE~~~~~~~~~~~~DvwSlGvil~ell~G~~pf~~~~~~~~~~~i~~~~g~p~~~~~~~~~~~~~~ 373 (492)
......++..|+|||++.+. .++.++|||||||++|+|++|+.||...+.......+...
T Consensus 154 ~~~~~~~~~~~y~~PE~~~~~-~~~~~~Di~s~G~il~~l~~g~~p~~~~~~~~~~~~~~~~------------------ 214 (256)
T cd06612 154 AKRNTVIGTPFWMAPEVIQEI-GYNNKADIWSLGITAIEMAEGKPPYSDIHPMRAIFMIPNK------------------ 214 (256)
T ss_pred cccccccCCccccCHHHHhcC-CCCchhhHHHHHHHHHHHHhCCCCCCCcchhhhhhhhccC------------------
Confidence 22345678899999998655 5899999999999999999999999876544332221110
Q ss_pred cCCCcccCCCcccccCCCCChhHhhhhccccccCCCCcCCHHHhhCCCCC
Q 011138 374 FKFPQIKAHPWHKIFHKRMPPEALDLVSRLLQYSPSLRCTALEACAHPFF 423 (492)
Q Consensus 374 ~~~~~~~~~~~~~~~~~~~s~~~~~Li~~~L~~dP~~R~t~~e~l~Hp~f 423 (492)
..+. ...+..++.++.+||.+||+.||.+|||+.|++.||||
T Consensus 215 -~~~~-------~~~~~~~~~~~~~~i~~~l~~~P~~Rps~~~il~~~~~ 256 (256)
T cd06612 215 -PPPT-------LSDPEKWSPEFNDFVKKCLVKDPEERPSAIQLLQHPFI 256 (256)
T ss_pred -CCCC-------CCchhhcCHHHHHHHHHHHhcChhhCcCHHHHhcCCCC
Confidence 0000 00123467899999999999999999999999999997
No 224
>PHA02988 hypothetical protein; Provisional
Probab=100.00 E-value=9.7e-41 Score=327.06 Aligned_cols=240 Identities=18% Similarity=0.228 Sum_probs=191.5
Q ss_pred eeeccCCceEEEEEEEcCCCCEEEEEEeccch-------hhHHHHHHHHHHcCCCCccccceeeeeccCCCceEEEEEee
Q 011138 143 RVVGTGSFGVVFQAKCLETGDSVAIKKVLQDK-------RYKNRELQIMRLLNHPNVVSLKHCFFSTTEKDELYLNLVLE 215 (492)
Q Consensus 143 ~~lG~G~fg~Vy~~~~~~~g~~vAiK~~~~~~-------~~~~~E~~il~~l~h~nIv~l~~~~~~~~~~~~~~~~lV~E 215 (492)
..||+|++|.||+|.. +|+.||||.+.... ....+|+.+|++++|||||++++++.... .+..++++|||
T Consensus 26 ~~i~~g~~~~v~~~~~--~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~~~g~~~~~~-~~~~~~~lv~E 102 (283)
T PHA02988 26 VLIKENDQNSIYKGIF--NNKEVIIRTFKKFHKGHKVLIDITENEIKNLRRIDSNNILKIYGFIIDIV-DDLPRLSLILE 102 (283)
T ss_pred eEEeeCCceEEEEEEE--CCEEEEEEeccccccccHHHHHHHHHHHHHHHhcCCCCEEEEeeeEEecc-cCCCceEEEEE
Confidence 4699999999999987 78999999885431 33458999999999999999999885422 22346889999
Q ss_pred echhhH-HHHhhhhhhcCCCcCHHHHHHHHHHHHHHHHHHHhhCCcccCCCCCCceEEcCCCCcEEEeeecCccccCCCC
Q 011138 216 YISETV-YRVSKHYTRMNQHVPILYVQLYTYQICRALNYLHHVVGVCHRDIKPQNLLVNPHTHQLKICDFGSAKMLVPGE 294 (492)
Q Consensus 216 ~~~~~l-~~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~yLH~~~givHrDlKp~NILl~~~~~~vkL~DFG~a~~~~~~~ 294 (492)
|+.++. .+.+. ....+++.....++.|++.||.|||+..+++||||||+|||++.++ .+||+|||+++....
T Consensus 103 y~~~g~L~~~l~----~~~~~~~~~~~~i~~~i~~~l~~lH~~~~~~Hrdlkp~nill~~~~-~~kl~dfg~~~~~~~-- 175 (283)
T PHA02988 103 YCTRGYLREVLD----KEKDLSFKTKLDMAIDCCKGLYNLYKYTNKPYKNLTSVSFLVTENY-KLKIICHGLEKILSS-- 175 (283)
T ss_pred eCCCCcHHHHHh----hCCCCChhHHHHHHHHHHHHHHHHHhcCCCCCCcCChhhEEECCCC-cEEEcccchHhhhcc--
Confidence 999764 43332 2356888889999999999999999634999999999999999887 799999999986532
Q ss_pred CCccceeccCccCchhhcCC-CCCCcchhhHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCCHHHHhhcCCCCcc
Q 011138 295 PNISYICSRYYRAPELIFGA-TEYTTAIDMWSIGCVLAELLLGQPLFPGESGVDQLVEIIKILGTPTREEIKCMNPNYTE 373 (492)
Q Consensus 295 ~~~~~~gt~~y~aPE~~~~~-~~~~~~~DvwSlGvil~ell~G~~pf~~~~~~~~~~~i~~~~g~p~~~~~~~~~~~~~~ 373 (492)
......|+..|+|||++.+. ..++.++|||||||++|||++|..||.+.+..+.+..+..... .
T Consensus 176 ~~~~~~~~~~y~aPE~~~~~~~~~~~k~Di~SlGvil~el~~g~~Pf~~~~~~~~~~~i~~~~~---------------~ 240 (283)
T PHA02988 176 PPFKNVNFMVYFSYKMLNDIFSEYTIKDDIYSLGVVLWEIFTGKIPFENLTTKEIYDLIINKNN---------------S 240 (283)
T ss_pred ccccccCcccccCHHHhhhccccccchhhhhHHHHHHHHHHHCCCCCCCCCHHHHHHHHHhcCC---------------C
Confidence 22356789999999998652 4589999999999999999999999998776655554433110 0
Q ss_pred cCCCcccCCCcccccCCCCChhHhhhhccccccCCCCcCCHHHhhC
Q 011138 374 FKFPQIKAHPWHKIFHKRMPPEALDLVSRLLQYSPSLRCTALEACA 419 (492)
Q Consensus 374 ~~~~~~~~~~~~~~~~~~~s~~~~~Li~~~L~~dP~~R~t~~e~l~ 419 (492)
.. ++...++++++||.+||+.||++|||+.++++
T Consensus 241 ~~------------~~~~~~~~l~~li~~cl~~dp~~Rps~~ell~ 274 (283)
T PHA02988 241 LK------------LPLDCPLEIKCIVEACTSHDSIKRPNIKEILY 274 (283)
T ss_pred CC------------CCCcCcHHHHHHHHHHhcCCcccCcCHHHHHH
Confidence 11 11246889999999999999999999999985
No 225
>cd05633 STKc_GRK3 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 3. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK3 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK3 (also known as beta-adrenergic receptor kinase 2) is wi
Probab=100.00 E-value=9.5e-41 Score=326.40 Aligned_cols=247 Identities=26% Similarity=0.378 Sum_probs=189.4
Q ss_pred eeccCCceEEEEEEEcCCCCEEEEEEeccch-------hhHHHHHHHHHH---cCCCCccccceeeeeccCCCceEEEEE
Q 011138 144 VVGTGSFGVVFQAKCLETGDSVAIKKVLQDK-------RYKNRELQIMRL---LNHPNVVSLKHCFFSTTEKDELYLNLV 213 (492)
Q Consensus 144 ~lG~G~fg~Vy~~~~~~~g~~vAiK~~~~~~-------~~~~~E~~il~~---l~h~nIv~l~~~~~~~~~~~~~~~~lV 213 (492)
.||+|+||.||++.+..+|+.||+|.+.... ....+|..+++. .+||||+.+++++. .....++|
T Consensus 1 ~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~-----~~~~~~lv 75 (279)
T cd05633 1 IIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVSTGDCPFIVCMTYAFH-----TPDKLCFI 75 (279)
T ss_pred CcccCCCeEEEEEEECCCCcEEEEEEEEccccccchHHHHHHHHHHHHHHHhhCCCCcEeEEEEEEe-----cCCeEEEE
Confidence 4899999999999999999999999875421 122344444443 47999999988883 33458899
Q ss_pred eeechhhHHHHhhhhhhcCCCcCHHHHHHHHHHHHHHHHHHHhhCCcccCCCCCCceEEcCCCCcEEEeeecCccccCCC
Q 011138 214 LEYISETVYRVSKHYTRMNQHVPILYVQLYTYQICRALNYLHHVVGVCHRDIKPQNLLVNPHTHQLKICDFGSAKMLVPG 293 (492)
Q Consensus 214 ~E~~~~~l~~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~yLH~~~givHrDlKp~NILl~~~~~~vkL~DFG~a~~~~~~ 293 (492)
|||+.++.+... ......+++..+..++.||+.||.|||+ +||+||||||+|||++.++ .++|+|||++......
T Consensus 76 ~e~~~~~~L~~~---i~~~~~l~~~~~~~i~~qi~~al~~lH~-~~ivH~dikp~Nil~~~~~-~~~l~dfg~~~~~~~~ 150 (279)
T cd05633 76 LDLMNGGDLHYH---LSQHGVFSEKEMRFYATEIILGLEHMHN-RFVVYRDLKPANILLDEHG-HVRISDLGLACDFSKK 150 (279)
T ss_pred EecCCCCCHHHH---HHhcCCCCHHHHHHHHHHHHHHHHHHHH-CCcCCCCCCHHHEEECCCC-CEEEccCCcceecccc
Confidence 999997644322 1224568999999999999999999997 9999999999999999887 7999999998754322
Q ss_pred CCCccceeccCccCchhhcCCCCCCcchhhHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCCHHHHhhcCCCCcc
Q 011138 294 EPNISYICSRYYRAPELIFGATEYTTAIDMWSIGCVLAELLLGQPLFPGESGVDQLVEIIKILGTPTREEIKCMNPNYTE 373 (492)
Q Consensus 294 ~~~~~~~gt~~y~aPE~~~~~~~~~~~~DvwSlGvil~ell~G~~pf~~~~~~~~~~~i~~~~g~p~~~~~~~~~~~~~~ 373 (492)
......||..|+|||.+.+...++.++|+||+||++|+|++|..||......... .+.....
T Consensus 151 -~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~~l~~l~~g~~pf~~~~~~~~~-~~~~~~~---------------- 212 (279)
T cd05633 151 -KPHASVGTHGYMAPEVLQKGTAYDSSADWFSLGCMLFKLLRGHSPFRQHKTKDKH-EIDRMTL---------------- 212 (279)
T ss_pred -CccCcCCCcCccCHHHhcCCCCCCchhhhHHHHHHHHHHHhCCCCcCCCCCcCHH-HHHHHhh----------------
Confidence 2234578999999999865555889999999999999999999999764322111 1111000
Q ss_pred cCCCcccCCCcccccCCCCChhHhhhhccccccCCCCcC-----CHHHhhCCCCCCCCC
Q 011138 374 FKFPQIKAHPWHKIFHKRMPPEALDLVSRLLQYSPSLRC-----TALEACAHPFFDDLR 427 (492)
Q Consensus 374 ~~~~~~~~~~~~~~~~~~~s~~~~~Li~~~L~~dP~~R~-----t~~e~l~Hp~f~~~~ 427 (492)
. +...++..+++++.+||.+||..||.+|+ ++.++++||||+++.
T Consensus 213 -~--------~~~~~~~~~~~~~~~li~~~l~~~p~~R~~~~~~~~~~~~~h~~~~~~~ 262 (279)
T cd05633 213 -T--------VNVELPDSFSPELKSLLEGLLQRDVSKRLGCLGRGAQEVKEHVFFKGID 262 (279)
T ss_pred -c--------CCcCCccccCHHHHHHHHHHhcCCHHHhcCCCCCCHHHHHhCccccCCC
Confidence 0 00112345789999999999999999999 699999999999865
No 226
>cd05577 STKc_GRK Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. GRKs contain a central catalytic domain, flanked by N- and C-terminal extensions. The N-terminus contains an RGS (regulator of
Probab=100.00 E-value=1.2e-40 Score=325.21 Aligned_cols=249 Identities=28% Similarity=0.410 Sum_probs=196.4
Q ss_pred eccCCceEEEEEEEcCCCCEEEEEEeccc-------hhhHHHHHHHHHHcCCCCccccceeeeeccCCCceEEEEEeeec
Q 011138 145 VGTGSFGVVFQAKCLETGDSVAIKKVLQD-------KRYKNRELQIMRLLNHPNVVSLKHCFFSTTEKDELYLNLVLEYI 217 (492)
Q Consensus 145 lG~G~fg~Vy~~~~~~~g~~vAiK~~~~~-------~~~~~~E~~il~~l~h~nIv~l~~~~~~~~~~~~~~~~lV~E~~ 217 (492)
||+|+||+||+|.+..+|+.||+|.+... .....+|+.+++.++||||++++++| ......|+||||+
T Consensus 1 lg~g~~g~vy~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~-----~~~~~~~lv~e~~ 75 (277)
T cd05577 1 LGKGGFGEVCACQVKATGKMYACKKLDKKRLKKRKGEQMALNEKKILEKVSSRFIVSLAYAF-----ETKDDLCLVMTLM 75 (277)
T ss_pred CCCCCceeEEEEEEcCCCcEEEEEEEehhhhhhhhhhHHHHHHHHHHHhCCCCCEeeeeeEE-----ecCCeEEEEEecC
Confidence 69999999999999999999999988532 12234699999999999999999888 4445689999999
Q ss_pred hhh-HHHHhhhhhhcCCCcCHHHHHHHHHHHHHHHHHHHhhCCcccCCCCCCceEEcCCCCcEEEeeecCccccCCCCCC
Q 011138 218 SET-VYRVSKHYTRMNQHVPILYVQLYTYQICRALNYLHHVVGVCHRDIKPQNLLVNPHTHQLKICDFGSAKMLVPGEPN 296 (492)
Q Consensus 218 ~~~-l~~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~yLH~~~givHrDlKp~NILl~~~~~~vkL~DFG~a~~~~~~~~~ 296 (492)
+++ +...+... ....+++..+..++.||+.||.|||+ +||+||||+|+||+++.++ .+||+|||.+.........
T Consensus 76 ~~~~L~~~l~~~--~~~~~~~~~~~~~~~ql~~~l~~lH~-~~i~H~di~p~Nil~~~~~-~~~l~dfg~~~~~~~~~~~ 151 (277)
T cd05577 76 NGGDLKYHIYNV--GEPGFPEARAIFYAAQIICGLEHLHQ-RRIVYRDLKPENVLLDDHG-NVRISDLGLAVELKGGKKI 151 (277)
T ss_pred CCCcHHHHHHHc--CcCCCCHHHHHHHHHHHHHHHHHHHh-CCcccCCCCHHHEEECCCC-CEEEccCcchhhhccCCcc
Confidence 865 43333221 12468999999999999999999997 9999999999999999887 7999999998766444444
Q ss_pred ccceeccCccCchhhcCCCCCCcchhhHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCCHHHHhhcCCCCcccCC
Q 011138 297 ISYICSRYYRAPELIFGATEYTTAIDMWSIGCVLAELLLGQPLFPGESGVDQLVEIIKILGTPTREEIKCMNPNYTEFKF 376 (492)
Q Consensus 297 ~~~~gt~~y~aPE~~~~~~~~~~~~DvwSlGvil~ell~G~~pf~~~~~~~~~~~i~~~~g~p~~~~~~~~~~~~~~~~~ 376 (492)
....++..|+|||++.+.. ++.++|||||||++|+|++|+.||...........+.... ...
T Consensus 152 ~~~~~~~~y~~PE~~~~~~-~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~-----------------~~~ 213 (277)
T cd05577 152 KGRAGTPGYMAPEVLQGEV-YDFSVDWFALGCTLYEMIAGRSPFRQRKEKVEKEELKRRT-----------------LEM 213 (277)
T ss_pred ccccCCCCcCCHHHhcCCC-CCchhhhHHHHHHHHHHhhCCCCCCCCcccccHHHHHhcc-----------------ccc
Confidence 4567788999999987655 8899999999999999999999997765422111211100 000
Q ss_pred CcccCCCcccccCCCCChhHhhhhccccccCCCCcC-----CHHHhhCCCCCCCCCC
Q 011138 377 PQIKAHPWHKIFHKRMPPEALDLVSRLLQYSPSLRC-----TALEACAHPFFDDLRD 428 (492)
Q Consensus 377 ~~~~~~~~~~~~~~~~s~~~~~Li~~~L~~dP~~R~-----t~~e~l~Hp~f~~~~~ 428 (492)
...++..+++++.+||.+||+.||.+|| ++.++++||||.++..
T Consensus 214 --------~~~~~~~~~~~~~~li~~~l~~~p~~R~~~~~~~~~~ll~h~~~~~~~~ 262 (277)
T cd05577 214 --------AVEYPDKFSPEAKDLCEALLQKDPEKRLGCRGGSADEVREHPLFKDLNW 262 (277)
T ss_pred --------cccCCccCCHHHHHHHHHHccCChhHccCCCcccHHHHHhChhhhcCCh
Confidence 0012235689999999999999999999 8999999999987654
No 227
>cd06652 STKc_MEKK2 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 2. Serine/threonine kinases (STKs), MAP/ERK kinase kinase 2 (MEKK2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK2 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates the MAPK kinase MEK5 (or MKK5), which in turn phosphorylates and activates extracellular signal-regulated kinase 5 (ERK5). The ERK5 cascade plays roles in promoting cell proliferation, differentiation, neuronal survival, and neuroprotection. MEKK2 also activates ERK1/2, c-Jun N-terminal kinase (JNK) and p38 through their re
Probab=100.00 E-value=1.8e-40 Score=321.59 Aligned_cols=249 Identities=27% Similarity=0.436 Sum_probs=196.6
Q ss_pred ceeEeeeeccCCceEEEEEEEcCCCCEEEEEEeccc---------hhhHHHHHHHHHHcCCCCccccceeeeeccCCCce
Q 011138 138 SYMAERVVGTGSFGVVFQAKCLETGDSVAIKKVLQD---------KRYKNRELQIMRLLNHPNVVSLKHCFFSTTEKDEL 208 (492)
Q Consensus 138 ~y~~~~~lG~G~fg~Vy~~~~~~~g~~vAiK~~~~~---------~~~~~~E~~il~~l~h~nIv~l~~~~~~~~~~~~~ 208 (492)
+|.+++.||+|+||.||.|.+..+|..||||.+..+ .....+|+.+++.++||||+++++++... ...
T Consensus 3 ~~~~~~~l~~g~~g~v~~~~~~~~~~~v~ik~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~---~~~ 79 (265)
T cd06652 3 NWRLGKLLGQGAFGRVYLCYDADTGRELAVKQVQFDPESPETSKEVNALECEIQLLKNLLHERIVQYYGCLRDP---MER 79 (265)
T ss_pred cceEeeEEecCCceEEEEEEEcCCCcEEEEEEeecCcCCcccHHHHHHHHHHHHHHHhcCCCCeeeEEeEeccC---CCc
Confidence 599999999999999999999999999999987421 12345799999999999999999987322 234
Q ss_pred EEEEEeeechhh-HHHHhhhhhhcCCCcCHHHHHHHHHHHHHHHHHHHhhCCcccCCCCCCceEEcCCCCcEEEeeecCc
Q 011138 209 YLNLVLEYISET-VYRVSKHYTRMNQHVPILYVQLYTYQICRALNYLHHVVGVCHRDIKPQNLLVNPHTHQLKICDFGSA 287 (492)
Q Consensus 209 ~~~lV~E~~~~~-l~~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~yLH~~~givHrDlKp~NILl~~~~~~vkL~DFG~a 287 (492)
.+++||||++++ +.+.+. ....+++..+..++.||+.||.|||+ +||+|+||||+||+++.++ .++|+|||++
T Consensus 80 ~~~~v~e~~~~~~L~~~l~----~~~~~~~~~~~~~~~~l~~~l~~lH~-~~i~H~dl~p~nil~~~~~-~~~l~Dfg~~ 153 (265)
T cd06652 80 TLSIFMEHMPGGSIKDQLK----SYGALTENVTRKYTRQILEGVSYLHS-NMIVHRDIKGANILRDSVG-NVKLGDFGAS 153 (265)
T ss_pred eEEEEEEecCCCcHHHHHH----HcCCCCHHHHHHHHHHHHHHHHHHHh-CCEecCCCCHHHEEecCCC-CEEECcCccc
Confidence 688999999865 443332 22457888899999999999999997 9999999999999999877 7999999998
Q ss_pred cccCCC----CCCccceeccCccCchhhcCCCCCCcchhhHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCCHHH
Q 011138 288 KMLVPG----EPNISYICSRYYRAPELIFGATEYTTAIDMWSIGCVLAELLLGQPLFPGESGVDQLVEIIKILGTPTREE 363 (492)
Q Consensus 288 ~~~~~~----~~~~~~~gt~~y~aPE~~~~~~~~~~~~DvwSlGvil~ell~G~~pf~~~~~~~~~~~i~~~~g~p~~~~ 363 (492)
...... .......|+..|+|||++.+. .++.++|||||||++|+|++|+.||........+.++.. .+.
T Consensus 154 ~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~-~~~~~~Dv~slG~il~el~~g~~p~~~~~~~~~~~~~~~---~~~--- 226 (265)
T cd06652 154 KRLQTICLSGTGMKSVTGTPYWMSPEVISGE-GYGRKADIWSVGCTVVEMLTEKPPWAEFEAMAAIFKIAT---QPT--- 226 (265)
T ss_pred cccccccccccccccCCCCccccChhhhcCC-CCCcchhHHHHHHHHHHHhhCCCCCCccchHHHHHHHhc---CCC---
Confidence 754321 112235688999999998664 488999999999999999999999987654444333221 110
Q ss_pred HhhcCCCCcccCCCcccCCCcccccCCCCChhHhhhhccccccCCCCcCCHHHhhCCCCCC
Q 011138 364 IKCMNPNYTEFKFPQIKAHPWHKIFHKRMPPEALDLVSRLLQYSPSLRCTALEACAHPFFD 424 (492)
Q Consensus 364 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~Li~~~L~~dP~~R~t~~e~l~Hp~f~ 424 (492)
. ...+..++..+.++|.+||. +|++||+++++++|||+.
T Consensus 227 ------------~---------~~~~~~~~~~~~~~i~~~l~-~p~~Rp~~~~il~~~~~~ 265 (265)
T cd06652 227 ------------N---------PVLPPHVSDHCRDFLKRIFV-EAKLRPSADELLRHTFVH 265 (265)
T ss_pred ------------C---------CCCchhhCHHHHHHHHHHhc-ChhhCCCHHHHhcCcccC
Confidence 0 01223467889999999995 999999999999999984
No 228
>cd06613 STKc_MAP4K3_like Catalytic domain of Mitogen-activated protein kinase kinase kinase kinase-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 3 (MAPKKKK3 or MAP4K3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily includes MAP4K3, MAP4K1, MAP4K2, MAP4K5, and related proteins. Vertebrate members contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activ
Probab=100.00 E-value=1.4e-40 Score=321.08 Aligned_cols=253 Identities=27% Similarity=0.410 Sum_probs=202.5
Q ss_pred cceeEeeeeccCCceEEEEEEEcCCCCEEEEEEeccc----hhhHHHHHHHHHHcCCCCccccceeeeeccCCCceEEEE
Q 011138 137 ISYMAERVVGTGSFGVVFQAKCLETGDSVAIKKVLQD----KRYKNRELQIMRLLNHPNVVSLKHCFFSTTEKDELYLNL 212 (492)
Q Consensus 137 ~~y~~~~~lG~G~fg~Vy~~~~~~~g~~vAiK~~~~~----~~~~~~E~~il~~l~h~nIv~l~~~~~~~~~~~~~~~~l 212 (492)
.+|.+.+.||.|+||.||+|.+..+++.+|+|.+... .....+|+.+++.++||||+++++++ .+...+|+
T Consensus 3 ~~~~~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~-----~~~~~~~l 77 (262)
T cd06613 3 EDYELIQRIGSGTYGDVYKARDIATGELVAIKVIKLEPGDDFEIIQQEISMLKECRHPNIVAYFGSY-----LRRDKLWI 77 (262)
T ss_pred cceEEEEEecCCCceEEEEeEecCCCCEEEEEEEEcCchhhHHHHHHHHHHHHhCCCCChhceEEEE-----EeCCEEEE
Confidence 4699999999999999999999999999999988543 23456899999999999999999988 34446899
Q ss_pred EeeechhhHHHHhhhhhhcCCCcCHHHHHHHHHHHHHHHHHHHhhCCcccCCCCCCceEEcCCCCcEEEeeecCccccCC
Q 011138 213 VLEYISETVYRVSKHYTRMNQHVPILYVQLYTYQICRALNYLHHVVGVCHRDIKPQNLLVNPHTHQLKICDFGSAKMLVP 292 (492)
Q Consensus 213 V~E~~~~~l~~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~yLH~~~givHrDlKp~NILl~~~~~~vkL~DFG~a~~~~~ 292 (492)
+|||++++.+..... .....+++..+..++.|++.||.|||+ +||+|+||||+||+++.++ .+||+|||++.....
T Consensus 78 ~~e~~~~~~l~~~~~--~~~~~l~~~~~~~~~~ql~~~l~~lh~-~~i~h~dl~p~ni~i~~~~-~~~l~d~g~~~~~~~ 153 (262)
T cd06613 78 VMEYCGGGSLQDIYQ--VTRGPLSELQIAYVCRETLKGLAYLHE-TGKIHRDIKGANILLTEDG-DVKLADFGVSAQLTA 153 (262)
T ss_pred EEeCCCCCcHHHHHH--hhccCCCHHHHHHHHHHHHHHHHHHHh-CCceecCCChhhEEECCCC-CEEECccccchhhhh
Confidence 999999765543221 223568899999999999999999997 9999999999999999877 799999999876543
Q ss_pred CC-CCccceeccCccCchhhcCC--CCCCcchhhHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCCHHHHhhcCC
Q 011138 293 GE-PNISYICSRYYRAPELIFGA--TEYTTAIDMWSIGCVLAELLLGQPLFPGESGVDQLVEIIKILGTPTREEIKCMNP 369 (492)
Q Consensus 293 ~~-~~~~~~gt~~y~aPE~~~~~--~~~~~~~DvwSlGvil~ell~G~~pf~~~~~~~~~~~i~~~~g~p~~~~~~~~~~ 369 (492)
.. ......++..|+|||.+.+. ..++.++|+|||||++|+|++|.+||...+.......+...
T Consensus 154 ~~~~~~~~~~~~~y~~Pe~~~~~~~~~~~~~~Di~slG~~l~~~~tg~~p~~~~~~~~~~~~~~~~-------------- 219 (262)
T cd06613 154 TIAKRKSFIGTPYWMAPEVAAVERKGGYDGKCDIWALGITAIELAELQPPMFDLHPMRALFLISKS-------------- 219 (262)
T ss_pred hhhccccccCCccccCchhhcccccCCcCchhhhHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhc--------------
Confidence 22 23345788999999998654 25788999999999999999999999887765554443221
Q ss_pred CCcccCCCcccCCCcccccCCCCChhHhhhhccccccCCCCcCCHHHhhCCCC
Q 011138 370 NYTEFKFPQIKAHPWHKIFHKRMPPEALDLVSRLLQYSPSLRCTALEACAHPF 422 (492)
Q Consensus 370 ~~~~~~~~~~~~~~~~~~~~~~~s~~~~~Li~~~L~~dP~~R~t~~e~l~Hp~ 422 (492)
.+..+.. .....++.++.+||.+||..||.+|||+.+++.|+|
T Consensus 220 ---~~~~~~~-------~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~il~~~~ 262 (262)
T cd06613 220 ---NFPPPKL-------KDKEKWSPVFHDFIKKCLTKDPKKRPTATKLLQHPF 262 (262)
T ss_pred ---cCCCccc-------cchhhhhHHHHHHHHHHcCCChhhCCCHHHHhcCCC
Confidence 0000000 011245788999999999999999999999999998
No 229
>cd05572 STKc_cGK_PKG Catalytic domain of the Protein Serine/Threonine Kinase, cGMP-dependent protein kinase. Serine/Threonine Kinases (STKs), cGMP-dependent protein kinase (cGK or PKG) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Mammals have two cGK isoforms from different genes, cGKI and cGKII. cGKI exists as two splice variants, cGKI-alpha and cGKI-beta. cGK consists of an N-terminal regulatory domain containing a dimerization and an autoinhibitory pseudosubstrate region, two cGMP-binding domains, and a C-terminal catalytic domain. Binding of cGMP to both binding sites releases the inhibition of the catalytic center by the pseudosubstrate region, allowi
Probab=100.00 E-value=1.5e-40 Score=321.32 Aligned_cols=244 Identities=30% Similarity=0.507 Sum_probs=197.0
Q ss_pred eccCCceEEEEEEEcCCCCEEEEEEeccch-------hhHHHHHHHHHHcCCCCccccceeeeeccCCCceEEEEEeeec
Q 011138 145 VGTGSFGVVFQAKCLETGDSVAIKKVLQDK-------RYKNRELQIMRLLNHPNVVSLKHCFFSTTEKDELYLNLVLEYI 217 (492)
Q Consensus 145 lG~G~fg~Vy~~~~~~~g~~vAiK~~~~~~-------~~~~~E~~il~~l~h~nIv~l~~~~~~~~~~~~~~~~lV~E~~ 217 (492)
||.|+||.||+|.+..+++.||+|.+.... ....+|+.+++.++||||+++++++ .+...+|+||||+
T Consensus 1 lg~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~-----~~~~~~~lv~e~~ 75 (262)
T cd05572 1 LGVGGFGRVELVKVKSKNRTFALKCVKKRHIVETGQQEHIFSEKEILEECNHPFIVKLYRTF-----KDKKYIYMLMEYC 75 (262)
T ss_pred CCCCCceEEEEEEECCCCcEEEEEEEehhcchhhhHHHHHHHHHHHHHhCCCCCEeeeeeeE-----EcCCccEEEEecC
Confidence 699999999999999999999999885422 3355799999999999999999987 3445689999999
Q ss_pred hhh-HHHHhhhhhhcCCCcCHHHHHHHHHHHHHHHHHHHhhCCcccCCCCCCceEEcCCCCcEEEeeecCccccCCCCCC
Q 011138 218 SET-VYRVSKHYTRMNQHVPILYVQLYTYQICRALNYLHHVVGVCHRDIKPQNLLVNPHTHQLKICDFGSAKMLVPGEPN 296 (492)
Q Consensus 218 ~~~-l~~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~yLH~~~givHrDlKp~NILl~~~~~~vkL~DFG~a~~~~~~~~~ 296 (492)
+++ +.+.+.. ...++...+..++.||+.||.|||+ +|++|+||||+||+++.++ .++|+|||++.........
T Consensus 76 ~~~~L~~~l~~----~~~l~~~~~~~~~~~i~~~l~~lH~-~~~~h~dl~~~nilv~~~~-~~~l~df~~~~~~~~~~~~ 149 (262)
T cd05572 76 LGGELWTILRD----RGLFDEYTARFYIACVVLAFEYLHN-RGIIYRDLKPENLLLDSNG-YVKLVDFGFAKKLKSGQKT 149 (262)
T ss_pred CCCcHHHHHhh----cCCCCHHHHHHHHHHHHHHHHHHhh-CCcccCCCCHHHEEEcCCC-CEEEeeCCcccccCccccc
Confidence 864 4443322 3457889999999999999999997 9999999999999999887 7999999999876544334
Q ss_pred ccceeccCccCchhhcCCCCCCcchhhHHHHHHHHHHHhCCCCCCCCC--hHHHHHHHHHHhCCCCHHHHhhcCCCCccc
Q 011138 297 ISYICSRYYRAPELIFGATEYTTAIDMWSIGCVLAELLLGQPLFPGES--GVDQLVEIIKILGTPTREEIKCMNPNYTEF 374 (492)
Q Consensus 297 ~~~~gt~~y~aPE~~~~~~~~~~~~DvwSlGvil~ell~G~~pf~~~~--~~~~~~~i~~~~g~p~~~~~~~~~~~~~~~ 374 (492)
....+++.|+|||.+.+. .++.++|+|||||++|+|++|..||.... ..+....+.... ...
T Consensus 150 ~~~~~~~~~~~PE~~~~~-~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~---------------~~~ 213 (262)
T cd05572 150 WTFCGTPEYVAPEIILNK-GYDFSVDYWSLGILLYELLTGRPPFGEDDEDPMEIYNDILKGN---------------GKL 213 (262)
T ss_pred ccccCCcCccChhHhcCC-CCCChhhhhhhHHHHHHHHhCCCCcCCCCCCHHHHHHHHhccC---------------CCC
Confidence 456789999999998654 48899999999999999999999998765 333333222100 011
Q ss_pred CCCcccCCCcccccCCCCChhHhhhhccccccCCCCcCC-----HHHhhCCCCCCCCC
Q 011138 375 KFPQIKAHPWHKIFHKRMPPEALDLVSRLLQYSPSLRCT-----ALEACAHPFFDDLR 427 (492)
Q Consensus 375 ~~~~~~~~~~~~~~~~~~s~~~~~Li~~~L~~dP~~R~t-----~~e~l~Hp~f~~~~ 427 (492)
. ++...++++.++|.+||..||.+|++ +.|+++||||+++.
T Consensus 214 ~------------~~~~~~~~~~~~i~~~l~~~p~~R~~~~~~~~~~l~~~~~~~~~~ 259 (262)
T cd05572 214 E------------FPNYIDKAAKDLIKQLLRRNPEERLGNLKGGIKDIKKHKWFNGFD 259 (262)
T ss_pred C------------CCcccCHHHHHHHHHHccCChhhCcCCcccCHHHHhcChhhhCCC
Confidence 1 22345789999999999999999999 99999999999864
No 230
>cd05609 STKc_MAST Catalytic domain of the Protein Serine/Threonine Kinase, Microtubule-associated serine/threonine kinase. Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, MAST, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. There are four mammalian MAST kinases, named MAST1-MAST4. MAST1 is also referred to as syntrophin-associated STK (SAST), while MAST2 is also called MAST205. MAST kinases are cytoskeletal associated kinases of unknown function that a
Probab=100.00 E-value=2.9e-40 Score=327.14 Aligned_cols=253 Identities=29% Similarity=0.504 Sum_probs=200.7
Q ss_pred ceeEeeeeccCCceEEEEEEEcCCCCEEEEEEeccch-------hhHHHHHHHHHHcCCCCccccceeeeeccCCCceEE
Q 011138 138 SYMAERVVGTGSFGVVFQAKCLETGDSVAIKKVLQDK-------RYKNRELQIMRLLNHPNVVSLKHCFFSTTEKDELYL 210 (492)
Q Consensus 138 ~y~~~~~lG~G~fg~Vy~~~~~~~g~~vAiK~~~~~~-------~~~~~E~~il~~l~h~nIv~l~~~~~~~~~~~~~~~ 210 (492)
+|.+.+.||+|+||.||++.+..+++.||+|.+.... ....+|+.+++.++||||+++++.+ ....++
T Consensus 2 ~y~~~~~l~~g~~~~v~~~~~~~~~~~v~ik~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~-----~~~~~~ 76 (305)
T cd05609 2 DFETIKLISNGAYGAVYLVRHKETRQRFAMKKINKQNLILRNQIQQVFVERDILTFAENPFVVSMFCSF-----ETKRHL 76 (305)
T ss_pred CceEeeEeecCCCeeEEEEEECCCCcEEEEEEeehhhhhhHHHHHHHHHHHHHHHhCCCCCeeeeEEEE-----ecCCEE
Confidence 5899999999999999999999999999999885432 2334799999999999999999888 444578
Q ss_pred EEEeeechhh-HHHHhhhhhhcCCCcCHHHHHHHHHHHHHHHHHHHhhCCcccCCCCCCceEEcCCCCcEEEeeecCccc
Q 011138 211 NLVLEYISET-VYRVSKHYTRMNQHVPILYVQLYTYQICRALNYLHHVVGVCHRDIKPQNLLVNPHTHQLKICDFGSAKM 289 (492)
Q Consensus 211 ~lV~E~~~~~-l~~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~yLH~~~givHrDlKp~NILl~~~~~~vkL~DFG~a~~ 289 (492)
++||||++|+ +...+.. ...+++..+..++.|++.||.|||+ +||+||||||+||+++.++ .+||+|||+++.
T Consensus 77 ~lv~e~~~g~~L~~~l~~----~~~~~~~~~~~~~~~i~~~l~~lH~-~~i~H~dl~p~NIll~~~~-~~~l~dfg~~~~ 150 (305)
T cd05609 77 CMVMEYVEGGDCATLLKN----IGALPVDMARMYFAETVLALEYLHN-YGIVHRDLKPDNLLITSMG-HIKLTDFGLSKI 150 (305)
T ss_pred EEEEecCCCCcHHHHHHH----cCCCCHHHHHHHHHHHHHHHHHHHH-CCccccCCchHHEEECCCC-CEEEeeCCCccc
Confidence 9999999875 4333322 3568889999999999999999997 9999999999999999877 799999999864
Q ss_pred cCCCC----------------CCccceeccCccCchhhcCCCCCCcchhhHHHHHHHHHHHhCCCCCCCCChHHHHHHHH
Q 011138 290 LVPGE----------------PNISYICSRYYRAPELIFGATEYTTAIDMWSIGCVLAELLLGQPLFPGESGVDQLVEII 353 (492)
Q Consensus 290 ~~~~~----------------~~~~~~gt~~y~aPE~~~~~~~~~~~~DvwSlGvil~ell~G~~pf~~~~~~~~~~~i~ 353 (492)
..... ......++..|+|||.+.+. .++.++|+|||||++|+|++|..||.+.+..+.+..+.
T Consensus 151 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~-~~~~~~Di~slG~vl~el~~g~~pf~~~~~~~~~~~~~ 229 (305)
T cd05609 151 GLMSLTTNLYEGHIEKDTREFLDKQVCGTPEYIAPEVILRQ-GYGKPVDWWAMGIILYEFLVGCVPFFGDTPEELFGQVI 229 (305)
T ss_pred cCcCccccccccccccchhhccccCCccCccccCchhccCC-CCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHH
Confidence 21000 01124578889999998654 48999999999999999999999998876655444433
Q ss_pred HHhCCCCHHHHhhcCCCCcccCCCcccCCCcccccCCCCChhHhhhhccccccCCCCcCC---HHHhhCCCCCCCCCC
Q 011138 354 KILGTPTREEIKCMNPNYTEFKFPQIKAHPWHKIFHKRMPPEALDLVSRLLQYSPSLRCT---ALEACAHPFFDDLRD 428 (492)
Q Consensus 354 ~~~g~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~Li~~~L~~dP~~R~t---~~e~l~Hp~f~~~~~ 428 (492)
.. ....|. ....++.++.+||.+||+.||++||+ +.++++||||.....
T Consensus 230 ~~-----------------~~~~~~---------~~~~~~~~~~~li~~~l~~~P~~R~~~~~~~~ll~~~~~~~~~~ 281 (305)
T cd05609 230 SD-----------------DIEWPE---------GDEALPADAQDLISRLLRQNPLERLGTGGAFEVKQHRFFLGLDW 281 (305)
T ss_pred hc-----------------ccCCCC---------ccccCCHHHHHHHHHHhccChhhccCccCHHHHHhCccccCCCH
Confidence 21 011111 01246889999999999999999998 799999999976543
No 231
>cd06629 STKc_MAPKKK_Bck1_like Catalytic domain of fungal Bck1-like MAP Kinase Kinase Kinases. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, fungal Bck1-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include the MAPKKKs Saccharomyces cerevisiae Bck1 and Schizosaccharomyces pombe Mkh1, and related proteins. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Budding yeast Bck1 is part of the cell inte
Probab=100.00 E-value=3e-40 Score=321.13 Aligned_cols=252 Identities=29% Similarity=0.493 Sum_probs=198.3
Q ss_pred ceeEeeeeccCCceEEEEEEEcCCCCEEEEEEeccch--------------hhHHHHHHHHHHcCCCCccccceeeeecc
Q 011138 138 SYMAERVVGTGSFGVVFQAKCLETGDSVAIKKVLQDK--------------RYKNRELQIMRLLNHPNVVSLKHCFFSTT 203 (492)
Q Consensus 138 ~y~~~~~lG~G~fg~Vy~~~~~~~g~~vAiK~~~~~~--------------~~~~~E~~il~~l~h~nIv~l~~~~~~~~ 203 (492)
+|.+.+.||.|+||.||+|.+..+|+.||+|.+.... ....+|+.+++.++||||+++++++
T Consensus 2 ~~~~~~~lg~g~~~~vy~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~---- 77 (272)
T cd06629 2 KWVKGELIGKGTYGRVYLALNVTTGEMMAVKQVELPATIAGRHDSRQKDMVKALRSEIETLKDLDHLNIVQYLGFE---- 77 (272)
T ss_pred ceeecceecccCceEEEEEeecCCCceeeeeeeechhhhhcccchHHHHHHHHHHHHHHHHHhcCCCCcceEEEEe----
Confidence 5899999999999999999999999999999874210 1245699999999999999999987
Q ss_pred CCCceEEEEEeeechhh-HHHHhhhhhhcCCCcCHHHHHHHHHHHHHHHHHHHhhCCcccCCCCCCceEEcCCCCcEEEe
Q 011138 204 EKDELYLNLVLEYISET-VYRVSKHYTRMNQHVPILYVQLYTYQICRALNYLHHVVGVCHRDIKPQNLLVNPHTHQLKIC 282 (492)
Q Consensus 204 ~~~~~~~~lV~E~~~~~-l~~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~yLH~~~givHrDlKp~NILl~~~~~~vkL~ 282 (492)
.....+++||||+.++ +...+.. ...++...++.++.||+.||.|||+ +|++||||||+||+++.++ .++|+
T Consensus 78 -~~~~~~~lv~e~~~~~~L~~~l~~----~~~l~~~~~~~~~~qi~~~l~~lH~-~~i~H~dl~~~nil~~~~~-~~~l~ 150 (272)
T cd06629 78 -TTEEYLSIFLEYVPGGSIGSCLRT----YGRFEEQLVRFFTEQVLEGLAYLHS-KGILHRDLKADNLLVDADG-ICKIS 150 (272)
T ss_pred -ccCCceEEEEecCCCCcHHHHHhh----ccCCCHHHHHHHHHHHHHHHHHHhh-CCeeecCCChhhEEEcCCC-eEEEe
Confidence 3445688999999865 4333322 2568888999999999999999997 8999999999999999887 89999
Q ss_pred eecCccccCCCC---CCccceeccCccCchhhcCCC-CCCcchhhHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCC
Q 011138 283 DFGSAKMLVPGE---PNISYICSRYYRAPELIFGAT-EYTTAIDMWSIGCVLAELLLGQPLFPGESGVDQLVEIIKILGT 358 (492)
Q Consensus 283 DFG~a~~~~~~~---~~~~~~gt~~y~aPE~~~~~~-~~~~~~DvwSlGvil~ell~G~~pf~~~~~~~~~~~i~~~~g~ 358 (492)
|||++....... ......|+..|+|||.+.... .++.++|+|||||++|+|++|..||........+.++....
T Consensus 151 d~~~~~~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~~~Dv~slG~~l~~l~~g~~p~~~~~~~~~~~~~~~~~-- 228 (272)
T cd06629 151 DFGISKKSDDIYDNDQNMSMQGSVFWMAPEVIHSYSQGYSAKVDIWSLGCVVLEMFAGRRPWSDEEAIAAMFKLGNKR-- 228 (272)
T ss_pred eccccccccccccccccccccCCccccCHHHhccccCCCCccchhHHHHHHHHHHHhCCCCCcCcchHHHHHHhhccc--
Confidence 999987543221 122356788999999986543 47899999999999999999999997655444333321100
Q ss_pred CCHHHHhhcCCCCcccCCCcccCCCcccccCCCCChhHhhhhccccccCCCCcCCHHHhhCCCCC
Q 011138 359 PTREEIKCMNPNYTEFKFPQIKAHPWHKIFHKRMPPEALDLVSRLLQYSPSLRCTALEACAHPFF 423 (492)
Q Consensus 359 p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~Li~~~L~~dP~~R~t~~e~l~Hp~f 423 (492)
....++ ......++.++.+||.+||..||.+||++.++++||||
T Consensus 229 -------------~~~~~~--------~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~il~~~~~ 272 (272)
T cd06629 229 -------------SAPPIP--------PDVSMNLSPVALDFLNACFTINPDNRPTARELLQHPFI 272 (272)
T ss_pred -------------cCCcCC--------ccccccCCHHHHHHHHHHhcCChhhCCCHHHHhhCCCC
Confidence 001111 11223578999999999999999999999999999997
No 232
>cd08218 STKc_Nek1 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 1. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 1 (Nek1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek1 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek1 is associated with centrosomes throughout the cell cycle. It is involved in the formation of primary cilium and in the maintenance of centrosomes. It cycles through the nucleus and may be capable of relaying signals between the cilium and the nucleus. Nek1 is implicated in the development of polycysti
Probab=100.00 E-value=3.4e-40 Score=317.66 Aligned_cols=248 Identities=26% Similarity=0.468 Sum_probs=201.6
Q ss_pred ceeEeeeeccCCceEEEEEEEcCCCCEEEEEEeccc------hhhHHHHHHHHHHcCCCCccccceeeeeccCCCceEEE
Q 011138 138 SYMAERVVGTGSFGVVFQAKCLETGDSVAIKKVLQD------KRYKNRELQIMRLLNHPNVVSLKHCFFSTTEKDELYLN 211 (492)
Q Consensus 138 ~y~~~~~lG~G~fg~Vy~~~~~~~g~~vAiK~~~~~------~~~~~~E~~il~~l~h~nIv~l~~~~~~~~~~~~~~~~ 211 (492)
+|.+.+.||+|+||.||.+.+..+|+.||+|.+... .....+|+.+++.++||||+++++++ .+..+.+
T Consensus 1 ~y~~~~~lg~g~~g~~~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~-----~~~~~~~ 75 (256)
T cd08218 1 KYVKVKKIGEGSFGKAILVKSKEDGKQYVIKEINISKMSPKEREESRKEVAVLSNMKHPNIVQYQESF-----EENGNLY 75 (256)
T ss_pred CceEEEEeccCCceEEEEEEEcCCCCEEEEEEEEhHhCChHHHHHHHHHHHHHHhCCCCCeeeeEeee-----cCCCeEE
Confidence 489999999999999999999999999999987532 22456799999999999999999988 4555789
Q ss_pred EEeeechh-hHHHHhhhhhhcCCCcCHHHHHHHHHHHHHHHHHHHhhCCcccCCCCCCceEEcCCCCcEEEeeecCcccc
Q 011138 212 LVLEYISE-TVYRVSKHYTRMNQHVPILYVQLYTYQICRALNYLHHVVGVCHRDIKPQNLLVNPHTHQLKICDFGSAKML 290 (492)
Q Consensus 212 lV~E~~~~-~l~~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~yLH~~~givHrDlKp~NILl~~~~~~vkL~DFG~a~~~ 290 (492)
+||||+.+ .+...+.. .....+++..+..++.||+.||.|||+ +|++|+||+|+|||++.++ .++|+|||++...
T Consensus 76 lv~e~~~~~~l~~~~~~--~~~~~~~~~~~~~~~~~l~~~l~~lh~-~~i~h~~l~~~nil~~~~~-~~~l~d~~~~~~~ 151 (256)
T cd08218 76 IVMDYCEGGDLYKKINA--QRGVLFPEDQILDWFVQICLALKHVHD-RKILHRDIKSQNIFLTKDG-TIKLGDFGIARVL 151 (256)
T ss_pred EEEecCCCCcHHHHHHh--ccCCCCCHHHHHHHHHHHHHHHHHHHh-CCEecCCCCHHHEEEcCCC-CEEEeeccceeec
Confidence 99999986 44443322 122357888899999999999999997 9999999999999999877 7999999999765
Q ss_pred CCCCC-CccceeccCccCchhhcCCCCCCcchhhHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCCHHHHhhcCC
Q 011138 291 VPGEP-NISYICSRYYRAPELIFGATEYTTAIDMWSIGCVLAELLLGQPLFPGESGVDQLVEIIKILGTPTREEIKCMNP 369 (492)
Q Consensus 291 ~~~~~-~~~~~gt~~y~aPE~~~~~~~~~~~~DvwSlGvil~ell~G~~pf~~~~~~~~~~~i~~~~g~p~~~~~~~~~~ 369 (492)
..... .....|++.|+|||++.+. .++.++|+|||||++|+|++|..||...+..+....+... .
T Consensus 152 ~~~~~~~~~~~~~~~~~~pe~~~~~-~~~~~~Dv~slG~i~~~l~~g~~~~~~~~~~~~~~~~~~~--~----------- 217 (256)
T cd08218 152 NSTVELARTCIGTPYYLSPEICENR-PYNNKSDIWALGCVLYEMCTLKHAFEAGNMKNLVLKIIRG--S----------- 217 (256)
T ss_pred CcchhhhhhccCCccccCHHHhCCC-CCCCccchhHHHHHHHHHHcCCCCccCCCHHHHHHHHhcC--C-----------
Confidence 33221 2234678899999998654 4788999999999999999999999877666555544321 0
Q ss_pred CCcccCCCcccCCCcccccCCCCChhHhhhhccccccCCCCcCCHHHhhCCCCC
Q 011138 370 NYTEFKFPQIKAHPWHKIFHKRMPPEALDLVSRLLQYSPSLRCTALEACAHPFF 423 (492)
Q Consensus 370 ~~~~~~~~~~~~~~~~~~~~~~~s~~~~~Li~~~L~~dP~~R~t~~e~l~Hp~f 423 (492)
++ ..+..++.++.++|.+||+.||.+||++.+++.||||
T Consensus 218 ------~~---------~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~vl~~~~~ 256 (256)
T cd08218 218 ------YP---------PVSSHYSYDLRNLVSQLFKRNPRDRPSVNSILEKNFI 256 (256)
T ss_pred ------CC---------CCcccCCHHHHHHHHHHhhCChhhCcCHHHHhhCcCC
Confidence 00 0123468899999999999999999999999999998
No 233
>cd06659 STKc_PAK6 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 6. Serine/threonine kinases (STKs), p21-activated kinase (PAK) 6, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK6 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK6 may play a role i
Probab=100.00 E-value=1.9e-40 Score=327.22 Aligned_cols=255 Identities=27% Similarity=0.428 Sum_probs=202.6
Q ss_pred eeEeeeeccCCceEEEEEEEcCCCCEEEEEEeccc----hhhHHHHHHHHHHcCCCCccccceeeeeccCCCceEEEEEe
Q 011138 139 YMAERVVGTGSFGVVFQAKCLETGDSVAIKKVLQD----KRYKNRELQIMRLLNHPNVVSLKHCFFSTTEKDELYLNLVL 214 (492)
Q Consensus 139 y~~~~~lG~G~fg~Vy~~~~~~~g~~vAiK~~~~~----~~~~~~E~~il~~l~h~nIv~l~~~~~~~~~~~~~~~~lV~ 214 (492)
|.....||+|+||.||+|.+..+++.||||.+... .....+|+.+++.++||||++++++|. .....|+||
T Consensus 23 ~~~~~~ig~g~~g~v~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~e~~~l~~l~hp~i~~~~~~~~-----~~~~~~iv~ 97 (297)
T cd06659 23 LENYIKIGEGSTGIVCIAREKHSGRQVAVKMMDLRKQQRRELLFNEVVIMRDYQHQNVVEMYKSYL-----VGEELWVLM 97 (297)
T ss_pred HHhhhhcCCCCceeEEEEEEcCCCCEEEEEEEEecccchHHHHHHHHHHHHhCCCCchhhhhhhee-----eCCeEEEEE
Confidence 44455799999999999999999999999987432 234457999999999999999999883 344688999
Q ss_pred eechhhHHHHhhhhhhcCCCcCHHHHHHHHHHHHHHHHHHHhhCCcccCCCCCCceEEcCCCCcEEEeeecCccccCCCC
Q 011138 215 EYISETVYRVSKHYTRMNQHVPILYVQLYTYQICRALNYLHHVVGVCHRDIKPQNLLVNPHTHQLKICDFGSAKMLVPGE 294 (492)
Q Consensus 215 E~~~~~l~~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~yLH~~~givHrDlKp~NILl~~~~~~vkL~DFG~a~~~~~~~ 294 (492)
||++++.+..... ...+++..+..++.||+.||.|||+ .||+||||||+||+++.++ .+||+|||++.......
T Consensus 98 e~~~~~~L~~~~~----~~~~~~~~~~~~~~qi~~~L~~LH~-~~ivH~dl~p~Nill~~~~-~~kL~dfg~~~~~~~~~ 171 (297)
T cd06659 98 EFLQGGALTDIVS----QTRLNEEQIATVCESVLQALCYLHS-QGVIHRDIKSDSILLTLDG-RVKLSDFGFCAQISKDV 171 (297)
T ss_pred ecCCCCCHHHHHh----hcCCCHHHHHHHHHHHHHHHHHHHh-CCeecCCCCHHHeEEccCC-cEEEeechhHhhccccc
Confidence 9998764443221 2457889999999999999999997 8999999999999999887 79999999987553322
Q ss_pred -CCccceeccCccCchhhcCCCCCCcchhhHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCCHHHHhhcCCCCcc
Q 011138 295 -PNISYICSRYYRAPELIFGATEYTTAIDMWSIGCVLAELLLGQPLFPGESGVDQLVEIIKILGTPTREEIKCMNPNYTE 373 (492)
Q Consensus 295 -~~~~~~gt~~y~aPE~~~~~~~~~~~~DvwSlGvil~ell~G~~pf~~~~~~~~~~~i~~~~g~p~~~~~~~~~~~~~~ 373 (492)
......|+..|+|||++.+. .++.++|||||||++|+|++|+.||...+..+.+..+.. .+.
T Consensus 172 ~~~~~~~~~~~y~aPE~~~~~-~~~~~~Dv~slG~il~el~~g~~p~~~~~~~~~~~~~~~---~~~------------- 234 (297)
T cd06659 172 PKRKSLVGTPYWMAPEVISRT-PYGTEVDIWSLGIMVIEMVDGEPPYFSDSPVQAMKRLRD---SPP------------- 234 (297)
T ss_pred ccccceecCccccCHHHHccC-CCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHhc---cCC-------------
Confidence 22346789999999999654 489999999999999999999999987765554443321 000
Q ss_pred cCCCcccCCCcccccCCCCChhHhhhhccccccCCCCcCCHHHhhCCCCCCCCCCCCC
Q 011138 374 FKFPQIKAHPWHKIFHKRMPPEALDLVSRLLQYSPSLRCTALEACAHPFFDDLRDPNT 431 (492)
Q Consensus 374 ~~~~~~~~~~~~~~~~~~~s~~~~~Li~~~L~~dP~~R~t~~e~l~Hp~f~~~~~~~~ 431 (492)
+. + .....++.++.++|.+||+.||.+||++.++++||||.+...+..
T Consensus 235 ---~~-----~--~~~~~~~~~l~~~i~~~l~~~P~~Rps~~~ll~~~~~~~~~~~~~ 282 (297)
T cd06659 235 ---PK-----L--KNAHKISPVLRDFLERMLTREPQERATAQELLDHPFLLQTGLPEC 282 (297)
T ss_pred ---CC-----c--cccCCCCHHHHHHHHHHhcCCcccCcCHHHHhhChhhccCCCccc
Confidence 00 0 011346888999999999999999999999999999998765433
No 234
>cd08221 STKc_Nek9 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 9. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 9 (Nek9) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek9 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek9, also called Nercc1, is primarily a cytoplasmic protein but can also localize in the nucleus. It is involved in modulating chromosome alignment and splitting during mitosis. It interacts with the gamma-tubulin ring complex and the Ran GTPase, and is implicated in microtubule organization. Nek9 associa
Probab=100.00 E-value=5.9e-40 Score=315.98 Aligned_cols=248 Identities=32% Similarity=0.510 Sum_probs=203.0
Q ss_pred ceeEeeeeccCCceEEEEEEEcCCCCEEEEEEeccc------hhhHHHHHHHHHHcCCCCccccceeeeeccCCCceEEE
Q 011138 138 SYMAERVVGTGSFGVVFQAKCLETGDSVAIKKVLQD------KRYKNRELQIMRLLNHPNVVSLKHCFFSTTEKDELYLN 211 (492)
Q Consensus 138 ~y~~~~~lG~G~fg~Vy~~~~~~~g~~vAiK~~~~~------~~~~~~E~~il~~l~h~nIv~l~~~~~~~~~~~~~~~~ 211 (492)
+|...+.||.|+||.||.+++..+++.+++|.+... .....+|+.++++++|+||+++++++. +...++
T Consensus 1 ~y~~~~~ig~g~~g~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~-----~~~~~~ 75 (256)
T cd08221 1 HYIPIRVLGKGAFGEATLYRRTEDDSLVVWKEVNLTRLSEKERRDALNEIVILSLLQHPNIIAYYNHFM-----DDNTLL 75 (256)
T ss_pred CceEeeEecccCCceEEEEEEcCCCcEEEEEEEeecccchhHHHHHHHHHHHHHhCCCCCeeEEEeEEe-----cCCeEE
Confidence 489999999999999999999999999999987432 123457999999999999999999984 445689
Q ss_pred EEeeechh-hHHHHhhhhhhcCCCcCHHHHHHHHHHHHHHHHHHHhhCCcccCCCCCCceEEcCCCCcEEEeeecCcccc
Q 011138 212 LVLEYISE-TVYRVSKHYTRMNQHVPILYVQLYTYQICRALNYLHHVVGVCHRDIKPQNLLVNPHTHQLKICDFGSAKML 290 (492)
Q Consensus 212 lV~E~~~~-~l~~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~yLH~~~givHrDlKp~NILl~~~~~~vkL~DFG~a~~~ 290 (492)
+||||+.+ .+.+.+... ....+++..+..++.|++.||.|||+ .|++||||||+||+++.++ .+||+|||++...
T Consensus 76 ~~~e~~~~~~L~~~~~~~--~~~~~~~~~~~~~~~~l~~~l~~lh~-~~i~h~dl~p~ni~~~~~~-~~kl~d~~~~~~~ 151 (256)
T cd08221 76 IEMEYANGGTLYDKIVRQ--KGQLFEEEMVLWYLFQIVSAVSYIHK-AGILHRDIKTLNIFLTKAG-LIKLGDFGISKIL 151 (256)
T ss_pred EEEEecCCCcHHHHHHhc--cccCCCHHHHHHHHHHHHHHHHHHHh-CCccccCCChHhEEEeCCC-CEEECcCcceEEc
Confidence 99999986 455444321 13568889999999999999999997 8999999999999999887 7999999999765
Q ss_pred CCCC-CCccceeccCccCchhhcCCCCCCcchhhHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCCHHHHhhcCC
Q 011138 291 VPGE-PNISYICSRYYRAPELIFGATEYTTAIDMWSIGCVLAELLLGQPLFPGESGVDQLVEIIKILGTPTREEIKCMNP 369 (492)
Q Consensus 291 ~~~~-~~~~~~gt~~y~aPE~~~~~~~~~~~~DvwSlGvil~ell~G~~pf~~~~~~~~~~~i~~~~g~p~~~~~~~~~~ 369 (492)
.... ......+++.|+|||++.+.. ++.++|+|||||++|+|++|..||...+..+....+.. +.+.
T Consensus 152 ~~~~~~~~~~~~~~~y~ape~~~~~~-~~~~~Dv~slG~i~~~l~~g~~~~~~~~~~~~~~~~~~--~~~~--------- 219 (256)
T cd08221 152 GSEYSMAETVVGTPYYMSPELCQGVK-YNFKSDIWALGCVLYELLTLKRTFDATNPLNLVVKIVQ--GNYT--------- 219 (256)
T ss_pred ccccccccccCCCccccCHhhcCCCC-CCCcchhHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHc--CCCC---------
Confidence 3332 223457899999999986554 78899999999999999999999988776665555532 1100
Q ss_pred CCcccCCCcccCCCcccccCCCCChhHhhhhccccccCCCCcCCHHHhhCCCCC
Q 011138 370 NYTEFKFPQIKAHPWHKIFHKRMPPEALDLVSRLLQYSPSLRCTALEACAHPFF 423 (492)
Q Consensus 370 ~~~~~~~~~~~~~~~~~~~~~~~s~~~~~Li~~~L~~dP~~R~t~~e~l~Hp~f 423 (492)
. ....++.++.++|.+||..||.+||++.++++|||+
T Consensus 220 --------~---------~~~~~~~~~~~~i~~~l~~~p~~R~s~~~ll~~~~l 256 (256)
T cd08221 220 --------P---------VVSVYSSELISLVHSLLQQDPEKRPTADEVLDQPLL 256 (256)
T ss_pred --------C---------CccccCHHHHHHHHHHcccCcccCCCHHHHhhCcCC
Confidence 0 113468899999999999999999999999999996
No 235
>cd08225 STKc_Nek5 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 5. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 5 (Nek5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek5 subfamily is one of a family of 11 different Neks (Nek1-11). The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Neks are involved in the regulation of downstream processes following the activation of Cdc2, and many of their functions are cell cycle-related. They play critical roles in microtubule dynamics during ciliogenesis and mitosis. The specific function of Nek5 is unknown.
Probab=100.00 E-value=5e-40 Score=316.34 Aligned_cols=249 Identities=26% Similarity=0.425 Sum_probs=200.8
Q ss_pred ceeEeeeeccCCceEEEEEEEcCCCCEEEEEEeccc------hhhHHHHHHHHHHcCCCCccccceeeeeccCCCceEEE
Q 011138 138 SYMAERVVGTGSFGVVFQAKCLETGDSVAIKKVLQD------KRYKNRELQIMRLLNHPNVVSLKHCFFSTTEKDELYLN 211 (492)
Q Consensus 138 ~y~~~~~lG~G~fg~Vy~~~~~~~g~~vAiK~~~~~------~~~~~~E~~il~~l~h~nIv~l~~~~~~~~~~~~~~~~ 211 (492)
+|.+.+.||+|+||.||++.+..+|..||+|.+... .....+|+.+++.++|+||+++++++ .+....+
T Consensus 1 ~~~~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~E~~~l~~~~h~~i~~~~~~~-----~~~~~~~ 75 (257)
T cd08225 1 RYEIIKKIGEGSFGKIYLAKAKSDSEHCVIKEIDLTKMPVKEKEASKKEVILLAKMKHPNIVTFFASF-----QENGRLF 75 (257)
T ss_pred CceEEEEecCCCcceEEEEEEcCCCceEEEEEeeHhhccchhhHHHHHHHHHHHhCCCCChhhhhhee-----ccCCeEE
Confidence 488999999999999999999999999999988532 23456899999999999999999988 4445689
Q ss_pred EEeeechh-hHHHHhhhhhhcCCCcCHHHHHHHHHHHHHHHHHHHhhCCcccCCCCCCceEEcCCCCcEEEeeecCcccc
Q 011138 212 LVLEYISE-TVYRVSKHYTRMNQHVPILYVQLYTYQICRALNYLHHVVGVCHRDIKPQNLLVNPHTHQLKICDFGSAKML 290 (492)
Q Consensus 212 lV~E~~~~-~l~~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~yLH~~~givHrDlKp~NILl~~~~~~vkL~DFG~a~~~ 290 (492)
+|+||+.+ .+...+.. .....+++..+..++.||+.||.|||+ .+|+|+||||+||+++.++..+||+|||.+...
T Consensus 76 lv~e~~~~~~L~~~~~~--~~~~~~~~~~~~~~~~~l~~~l~~lh~-~~i~H~dl~~~nil~~~~~~~~~l~d~~~~~~~ 152 (257)
T cd08225 76 IVMEYCDGGDLMKRINR--QRGVLFSEDQILSWFVQISLGLKHIHD-RKILHRDIKSQNIFLSKNGMVAKLGDFGIARQL 152 (257)
T ss_pred EEEecCCCCcHHHHHHh--ccCCCCCHHHHHHHHHHHHHHHHHHHH-CCcccccCCHHHEEEcCCCCeEEecccccchhc
Confidence 99999976 44443322 122357888999999999999999997 999999999999999987656899999998766
Q ss_pred CCCCC-CccceeccCccCchhhcCCCCCCcchhhHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCCHHHHhhcCC
Q 011138 291 VPGEP-NISYICSRYYRAPELIFGATEYTTAIDMWSIGCVLAELLLGQPLFPGESGVDQLVEIIKILGTPTREEIKCMNP 369 (492)
Q Consensus 291 ~~~~~-~~~~~gt~~y~aPE~~~~~~~~~~~~DvwSlGvil~ell~G~~pf~~~~~~~~~~~i~~~~g~p~~~~~~~~~~ 369 (492)
..... .....|++.|+|||++.+. .++.++|+|||||++|+|++|..||...+..+....+...
T Consensus 153 ~~~~~~~~~~~~~~~~~ape~~~~~-~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~-------------- 217 (257)
T cd08225 153 NDSMELAYTCVGTPYYLSPEICQNR-PYNNKTDIWSLGCVLYELCTLKHPFEGNNLHQLVLKICQG-------------- 217 (257)
T ss_pred cCCcccccccCCCccccCHHHHcCC-CCCchhhHHHHHHHHHHHHhCCCCCCCccHHHHHHHHhcc--------------
Confidence 43322 2234688999999998654 4889999999999999999999999877655544433221
Q ss_pred CCcccCCCcccCCCcccccCCCCChhHhhhhccccccCCCCcCCHHHhhCCCCC
Q 011138 370 NYTEFKFPQIKAHPWHKIFHKRMPPEALDLVSRLLQYSPSLRCTALEACAHPFF 423 (492)
Q Consensus 370 ~~~~~~~~~~~~~~~~~~~~~~~s~~~~~Li~~~L~~dP~~R~t~~e~l~Hp~f 423 (492)
.++ .....++.++.++|.+||..+|++|||+.++++||||
T Consensus 218 -----~~~---------~~~~~~~~~~~~~i~~~l~~~p~~Rpt~~~ll~~~~~ 257 (257)
T cd08225 218 -----YFA---------PISPNFSRDLRSLISQLFKVSPRDRPSITSILKRPFL 257 (257)
T ss_pred -----cCC---------CCCCCCCHHHHHHHHHHhccChhhCcCHHHHhhCCCC
Confidence 000 0123468899999999999999999999999999997
No 236
>cd05606 STKc_beta_ARK Catalytic domain of the Protein Serine/Threonine Kinase, beta-adrenergic receptor kinase. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, beta-adrenergic receptor kinase (beta-ARK) group, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. The beta-ARK group is co
Probab=100.00 E-value=3.1e-40 Score=322.54 Aligned_cols=247 Identities=25% Similarity=0.385 Sum_probs=191.0
Q ss_pred eeccCCceEEEEEEEcCCCCEEEEEEeccch-------hhHHHHH---HHHHHcCCCCccccceeeeeccCCCceEEEEE
Q 011138 144 VVGTGSFGVVFQAKCLETGDSVAIKKVLQDK-------RYKNREL---QIMRLLNHPNVVSLKHCFFSTTEKDELYLNLV 213 (492)
Q Consensus 144 ~lG~G~fg~Vy~~~~~~~g~~vAiK~~~~~~-------~~~~~E~---~il~~l~h~nIv~l~~~~~~~~~~~~~~~~lV 213 (492)
+||+|+||.||+|.+..+++.||||.+.+.. .....|. .+++...||||++++++| .+...+|+|
T Consensus 1 ~ig~g~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~-----~~~~~~~~v 75 (278)
T cd05606 1 IIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVSTGDCPFIVCMSYAF-----HTPDKLSFI 75 (278)
T ss_pred CcccCCCeEEEEEEEecCCCEEEEEEeeccccccchhHHHHHHHHHHHHHHHhCCCCcEeeeeeee-----ecCCEEEEE
Confidence 4899999999999999999999999875421 1122333 344456799999999888 444568999
Q ss_pred eeechhhHHHHhhhhhhcCCCcCHHHHHHHHHHHHHHHHHHHhhCCcccCCCCCCceEEcCCCCcEEEeeecCccccCCC
Q 011138 214 LEYISETVYRVSKHYTRMNQHVPILYVQLYTYQICRALNYLHHVVGVCHRDIKPQNLLVNPHTHQLKICDFGSAKMLVPG 293 (492)
Q Consensus 214 ~E~~~~~l~~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~yLH~~~givHrDlKp~NILl~~~~~~vkL~DFG~a~~~~~~ 293 (492)
|||+.|+.+... ......+++..++.++.|++.||.|||+ .+|+||||||+||+++.++ .+||+|||++......
T Consensus 76 ~e~~~g~~L~~~---l~~~~~l~~~~~~~~~~ql~~~l~~lH~-~~i~H~di~p~nili~~~~-~~kl~dfg~~~~~~~~ 150 (278)
T cd05606 76 LDLMNGGDLHYH---LSQHGVFSEAEMRFYAAEIILGLEHMHN-RFVVYRDLKPANILLDEHG-HVRISDLGLACDFSKK 150 (278)
T ss_pred EecCCCCcHHHH---HHhcCCCCHHHHHHHHHHHHHHHHHHHH-CCEEcCCCCHHHEEECCCC-CEEEccCcCccccCcc
Confidence 999987654322 1224568999999999999999999997 9999999999999999887 7999999998755332
Q ss_pred CCCccceeccCccCchhhcCCCCCCcchhhHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCCHHHHhhcCCCCcc
Q 011138 294 EPNISYICSRYYRAPELIFGATEYTTAIDMWSIGCVLAELLLGQPLFPGESGVDQLVEIIKILGTPTREEIKCMNPNYTE 373 (492)
Q Consensus 294 ~~~~~~~gt~~y~aPE~~~~~~~~~~~~DvwSlGvil~ell~G~~pf~~~~~~~~~~~i~~~~g~p~~~~~~~~~~~~~~ 373 (492)
......|+..|+|||++.+...++.++||||+||++|+|++|+.||.......... +...... ..
T Consensus 151 -~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~s~G~~l~~l~~g~~p~~~~~~~~~~~-~~~~~~~-------------~~ 215 (278)
T cd05606 151 -KPHASVGTHGYMAPEVLQKGVAYDSSADWFSLGCMLFKLLRGHSPFRQHKTKDKHE-IDRMTLT-------------MA 215 (278)
T ss_pred -CCcCcCCCcCCcCcHHhcCCCCCCcccchHhHHHHHHHHHhCCCCCCCCCccchHH-HHHHhhc-------------cC
Confidence 22345789999999999755568999999999999999999999998753221111 1110000 00
Q ss_pred cCCCcccCCCcccccCCCCChhHhhhhccccccCCCCcC-----CHHHhhCCCCCCCCC
Q 011138 374 FKFPQIKAHPWHKIFHKRMPPEALDLVSRLLQYSPSLRC-----TALEACAHPFFDDLR 427 (492)
Q Consensus 374 ~~~~~~~~~~~~~~~~~~~s~~~~~Li~~~L~~dP~~R~-----t~~e~l~Hp~f~~~~ 427 (492)
. .++..++.++.++|.+||..||.+|+ ++.++++||||++..
T Consensus 216 ~------------~~~~~~s~~~~~li~~~l~~~p~~R~~~~~~~~~~ll~~~~~~~~~ 262 (278)
T cd05606 216 V------------ELPDSFSPELRSLLEGLLQRDVNRRLGCLGRGAQEVKEHPFFRSLD 262 (278)
T ss_pred C------------CCCCcCCHHHHHHHHHHhhcCHHhccCCCCCCHHHHHhCccccCCC
Confidence 0 12234689999999999999999999 999999999999865
No 237
>cd05106 PTKc_CSF-1R Catalytic domain of the Protein Tyrosine Kinase, Colony-Stimulating Factor-1 Receptor. Protein Tyrosine Kinase (PTK) family; Colony-Stimulating Factor-1 Receptor (CSF-1R); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. CSF-1R, also called c-Fms, is a member of the Platelet Derived Growth Factor Receptor (PDGFR) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of CSF-1R to its ligand, CSF-1, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. CSF-1R signaling is criti
Probab=100.00 E-value=2.2e-40 Score=337.22 Aligned_cols=249 Identities=23% Similarity=0.345 Sum_probs=190.8
Q ss_pred ccceeEeeeeccCCceEEEEEEEcCCC-----CEEEEEEeccch-----hhHHHHHHHHHHc-CCCCccccceeeeeccC
Q 011138 136 TISYMAERVVGTGSFGVVFQAKCLETG-----DSVAIKKVLQDK-----RYKNRELQIMRLL-NHPNVVSLKHCFFSTTE 204 (492)
Q Consensus 136 ~~~y~~~~~lG~G~fg~Vy~~~~~~~g-----~~vAiK~~~~~~-----~~~~~E~~il~~l-~h~nIv~l~~~~~~~~~ 204 (492)
..+|.+.+.||+|+||.||+|.+..+| ..||||++.... ....+|+.+++.+ +|+|||++++++
T Consensus 37 ~~~~~~~~~LG~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~il~~l~~h~nIv~~~~~~----- 111 (374)
T cd05106 37 RDNLQFGKTLGAGAFGKVVEATAFGLGKEDNVLRVAVKMLKASAHTDEREALMSELKILSHLGQHKNIVNLLGAC----- 111 (374)
T ss_pred HHHceehheecCCCcccEEEEEEecCCcccccceeEEEeccCCCCHHHHHHHHHHHHHHHhhccCCceeeEeeEe-----
Confidence 447999999999999999999865444 579999885432 2345799999999 899999999988
Q ss_pred CCceEEEEEeeechhh-HHHHhhhhh------------------------------------------------------
Q 011138 205 KDELYLNLVLEYISET-VYRVSKHYT------------------------------------------------------ 229 (492)
Q Consensus 205 ~~~~~~~lV~E~~~~~-l~~~~~~~~------------------------------------------------------ 229 (492)
.....+++||||+.++ +.+.+....
T Consensus 112 ~~~~~~~lv~ey~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 191 (374)
T cd05106 112 THGGPVLVITEYCCYGDLLNFLRKKAETFLNFVMALPEISETSSDYKNITLEKKYIRSDSGFSSQGSDTYVEMRPVSSSS 191 (374)
T ss_pred cCCCCeEEeHhhccCCcHHHHHHhhhhhhccccccccccccccccccccchhcccccccccccccccccccccCCccccc
Confidence 4444689999999854 444432211
Q ss_pred ------------hcCCCcCHHHHHHHHHHHHHHHHHHHhhCCcccCCCCCCceEEcCCCCcEEEeeecCccccCCCCCC-
Q 011138 230 ------------RMNQHVPILYVQLYTYQICRALNYLHHVVGVCHRDIKPQNLLVNPHTHQLKICDFGSAKMLVPGEPN- 296 (492)
Q Consensus 230 ------------~~~~~~~~~~~~~i~~qi~~aL~yLH~~~givHrDlKp~NILl~~~~~~vkL~DFG~a~~~~~~~~~- 296 (492)
.....+++..+..++.||+.||.|||+ +||+||||||+|||++.++ .+||+|||+++........
T Consensus 192 ~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~yLH~-~giiHrDLkp~Nil~~~~~-~~kL~DfGla~~~~~~~~~~ 269 (374)
T cd05106 192 SQSSDSKDEEDTEDSWPLDLDDLLRFSSQVAQGMDFLAS-KNCIHRDVAARNVLLTDGR-VAKICDFGLARDIMNDSNYV 269 (374)
T ss_pred cccccccchhccCCCCCcCHHHHHHHHHHHHHHHHHHHH-CCEEeccCchheEEEeCCC-eEEEeeceeeeeccCCccee
Confidence 011346778889999999999999997 9999999999999999777 7999999999765333211
Q ss_pred --ccceeccCccCchhhcCCCCCCcchhhHHHHHHHHHHHh-CCCCCCCCChHHHHHHHHHHhCCCCHHHHhhcCCCCcc
Q 011138 297 --ISYICSRYYRAPELIFGATEYTTAIDMWSIGCVLAELLL-GQPLFPGESGVDQLVEIIKILGTPTREEIKCMNPNYTE 373 (492)
Q Consensus 297 --~~~~gt~~y~aPE~~~~~~~~~~~~DvwSlGvil~ell~-G~~pf~~~~~~~~~~~i~~~~g~p~~~~~~~~~~~~~~ 373 (492)
....++..|+|||++.+. .++.++|||||||++|+|++ |..||........+..+....
T Consensus 270 ~~~~~~~~~~y~aPE~~~~~-~~~~~~DvwSlGvil~ellt~G~~Pf~~~~~~~~~~~~~~~~----------------- 331 (374)
T cd05106 270 VKGNARLPVKWMAPESIFDC-VYTVQSDVWSYGILLWEIFSLGKSPYPGILVNSKFYKMVKRG----------------- 331 (374)
T ss_pred eccCCCCccceeCHHHhcCC-CCCccccHHHHHHHHHHHHhCCCCCCccccccHHHHHHHHcc-----------------
Confidence 122345679999998654 48999999999999999997 999998765544444433210
Q ss_pred cCCCcccCCCcccccCCCCChhHhhhhccccccCCCCcCCHHHhhC
Q 011138 374 FKFPQIKAHPWHKIFHKRMPPEALDLVSRLLQYSPSLRCTALEACA 419 (492)
Q Consensus 374 ~~~~~~~~~~~~~~~~~~~s~~~~~Li~~~L~~dP~~R~t~~e~l~ 419 (492)
... ..+..+++++++||.+||+.||.+|||+.++++
T Consensus 332 ~~~----------~~~~~~~~~l~~li~~cl~~dp~~RPs~~~l~~ 367 (374)
T cd05106 332 YQM----------SRPDFAPPEIYSIMKMCWNLEPTERPTFSQISQ 367 (374)
T ss_pred cCc----------cCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHH
Confidence 000 011236899999999999999999999999875
No 238
>cd06624 STKc_ASK Catalytic domain of the Protein Serine/Threonine Kinase, Apoptosis signal-regulating kinase. Serine/threonine kinases (STKs), Apoptosis signal-regulating kinase (ASK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ASK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Subfamily members are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks) and include ASK1, ASK2, and MAPKKK15. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. ASK1 (also called MAPKKK5) functions in the c-Jun N-terminal kina
Probab=100.00 E-value=6.3e-40 Score=318.22 Aligned_cols=246 Identities=27% Similarity=0.454 Sum_probs=190.3
Q ss_pred eeeccCCceEEEEEEEcCCCCEEEEEEeccc----hhhHHHHHHHHHHcCCCCccccceeeeeccCCCceEEEEEeeech
Q 011138 143 RVVGTGSFGVVFQAKCLETGDSVAIKKVLQD----KRYKNRELQIMRLLNHPNVVSLKHCFFSTTEKDELYLNLVLEYIS 218 (492)
Q Consensus 143 ~~lG~G~fg~Vy~~~~~~~g~~vAiK~~~~~----~~~~~~E~~il~~l~h~nIv~l~~~~~~~~~~~~~~~~lV~E~~~ 218 (492)
..||+|+||.||+|.+..++..||+|.+... .....+|+.+++.++|+||+++++++ ....+.++|+||+.
T Consensus 14 ~~lg~g~~g~v~~~~~~~~~~~v~~k~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~-----~~~~~~~lv~e~~~ 88 (268)
T cd06624 14 VVLGKGTYGIVYAARDLSTQVRIAIKEIPERDSRYVQPLHEEIALHSYLKHRNIVQYLGSD-----SENGFFKIFMEQVP 88 (268)
T ss_pred EEEecCCceEEEEeEecCCCcEEEEEEecCCCHHHHHHHHHHHHHHHhcCCCCeeeeeeee-----ccCCEEEEEEecCC
Confidence 4699999999999999999999999987543 23456899999999999999999988 44456899999998
Q ss_pred hh-HHHHhhhhhhcCCCc--CHHHHHHHHHHHHHHHHHHHhhCCcccCCCCCCceEEcCCCCcEEEeeecCccccCCCCC
Q 011138 219 ET-VYRVSKHYTRMNQHV--PILYVQLYTYQICRALNYLHHVVGVCHRDIKPQNLLVNPHTHQLKICDFGSAKMLVPGEP 295 (492)
Q Consensus 219 ~~-l~~~~~~~~~~~~~~--~~~~~~~i~~qi~~aL~yLH~~~givHrDlKp~NILl~~~~~~vkL~DFG~a~~~~~~~~ 295 (492)
++ +...+... ...+ +...+..++.||+.||.|||+ +||+||||||+||+++.+...++|+|||++........
T Consensus 89 ~~~L~~~l~~~---~~~~~~~~~~~~~~~~qi~~al~~lH~-~~i~h~dl~p~nil~~~~~~~~~l~dfg~~~~~~~~~~ 164 (268)
T cd06624 89 GGSLSALLRSK---WGPLKDNEQTIIFYTKQILEGLKYLHD-NQIVHRDIKGDNVLVNTYSGVVKISDFGTSKRLAGINP 164 (268)
T ss_pred CCCHHHHHHHh---cccCCCcHHHHHHHHHHHHHHHHHHHH-CCEeecCCCHHHEEEcCCCCeEEEecchhheecccCCC
Confidence 65 44433221 1233 777888899999999999997 99999999999999987544899999999876533222
Q ss_pred -CccceeccCccCchhhcCC-CCCCcchhhHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCCHHHHhhcCCCCcc
Q 011138 296 -NISYICSRYYRAPELIFGA-TEYTTAIDMWSIGCVLAELLLGQPLFPGESGVDQLVEIIKILGTPTREEIKCMNPNYTE 373 (492)
Q Consensus 296 -~~~~~gt~~y~aPE~~~~~-~~~~~~~DvwSlGvil~ell~G~~pf~~~~~~~~~~~i~~~~g~p~~~~~~~~~~~~~~ 373 (492)
.....|++.|+|||++.+. ..++.++|+|||||++|+|++|.+||.................
T Consensus 165 ~~~~~~~~~~~~aPE~~~~~~~~~~~~~Dv~slGvvl~~l~~g~~p~~~~~~~~~~~~~~~~~~---------------- 228 (268)
T cd06624 165 CTETFTGTLQYMAPEVIDKGPRGYGAPADIWSLGCTIVEMATGKPPFIELGEPQAAMFKVGMFK---------------- 228 (268)
T ss_pred ccccCCCCccccChhhhccccccCCchhhhHHHHHHHHHHHhCCCCCccccChhhhHhhhhhhc----------------
Confidence 2234678999999998543 3478899999999999999999999975432211110000000
Q ss_pred cCCCcccCCCcccccCCCCChhHhhhhccccccCCCCcCCHHHhhCCCCC
Q 011138 374 FKFPQIKAHPWHKIFHKRMPPEALDLVSRLLQYSPSLRCTALEACAHPFF 423 (492)
Q Consensus 374 ~~~~~~~~~~~~~~~~~~~s~~~~~Li~~~L~~dP~~R~t~~e~l~Hp~f 423 (492)
. ...++..+++++++|+.+||+.+|.+|||+.+++.||||
T Consensus 229 -~---------~~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~ll~~~~~ 268 (268)
T cd06624 229 -I---------HPEIPESLSAEAKNFILRCFEPDPDKRASAHDLLQDPFL 268 (268)
T ss_pred -c---------CCCCCcccCHHHHHHHHHHcCCCchhCCCHHHHHhCCCC
Confidence 0 011234578899999999999999999999999999997
No 239
>KOG4645 consensus MAPKKK (MAP kinase kinase kinase) SSK2 and related serine/threonine protein kinases [Signal transduction mechanisms]
Probab=100.00 E-value=2.4e-42 Score=369.40 Aligned_cols=257 Identities=28% Similarity=0.443 Sum_probs=207.5
Q ss_pred ccceeEeeeeccCCceEEEEEEEcCCCCEEEEEEeccc------hhhHHHHHHHHHHcCCCCccccceeeeeccCCCceE
Q 011138 136 TISYMAERVVGTGSFGVVFQAKCLETGDSVAIKKVLQD------KRYKNRELQIMRLLNHPNVVSLKHCFFSTTEKDELY 209 (492)
Q Consensus 136 ~~~y~~~~~lG~G~fg~Vy~~~~~~~g~~vAiK~~~~~------~~~~~~E~~il~~l~h~nIv~l~~~~~~~~~~~~~~ 209 (492)
+.+|.-+..||.|.||.||.|.+..+|+..|+|-+.-. -....+|..++..|+|||+|++|++=...+ -
T Consensus 1234 ~~rWqrg~~Ig~G~fG~VYtavN~~tGellAvKEI~iq~~~~k~~~~i~eEm~vlE~lnHpNlV~YyGVEvHRe-----k 1308 (1509)
T KOG4645|consen 1234 TFRWQRGNFIGGGTFGKVYTAVNLDTGELLAVKEIKIQDSDHKTFKLIAEEMKVLEGLNHPNLVRYYGVEVHRE-----K 1308 (1509)
T ss_pred eeeeccccccCCcceeeeEEeecCCccchhhhhhhhcCccccccCcchHHHHHHHHhccCccccccCceeecHH-----H
Confidence 34677888999999999999999999999999976322 233458999999999999999998764433 3
Q ss_pred EEEEeeechhhHHHHhhhhhhcCCCcCHHHHHHHHHHHHHHHHHHHhhCCcccCCCCCCceEEcCCCCcEEEeeecCccc
Q 011138 210 LNLVLEYISETVYRVSKHYTRMNQHVPILYVQLYTYQICRALNYLHHVVGVCHRDIKPQNLLVNPHTHQLKICDFGSAKM 289 (492)
Q Consensus 210 ~~lV~E~~~~~l~~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~yLH~~~givHrDlKp~NILl~~~~~~vkL~DFG~a~~ 289 (492)
++|.||||.|+.+..+.. .++..++...+.|..|++.|+.|||+ +|||||||||+|||++.+| .+|++|||.|..
T Consensus 1309 v~IFMEyC~~GsLa~ll~---~gri~dE~vt~vyt~qll~gla~LH~-~gIVHRDIK~aNI~Ld~~g-~iK~~DFGsa~k 1383 (1509)
T KOG4645|consen 1309 VYIFMEYCEGGSLASLLE---HGRIEDEMVTRVYTKQLLEGLAYLHE-HGIVHRDIKPANILLDFNG-LIKYGDFGSAVK 1383 (1509)
T ss_pred HHHHHHHhccCcHHHHHH---hcchhhhhHHHHHHHHHHHHHHHHHh-cCceecCCCccceeeecCC-cEEeecccceeE
Confidence 789999999765543332 24456778889999999999999998 9999999999999999888 899999999988
Q ss_pred cCCCCC-----CccceeccCccCchhhcCCC--CCCcchhhHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCCHH
Q 011138 290 LVPGEP-----NISYICSRYYRAPELIFGAT--EYTTAIDMWSIGCVLAELLLGQPLFPGESGVDQLVEIIKILGTPTRE 362 (492)
Q Consensus 290 ~~~~~~-----~~~~~gt~~y~aPE~~~~~~--~~~~~~DvwSlGvil~ell~G~~pf~~~~~~~~~~~i~~~~g~p~~~ 362 (492)
+.+... .....||+.|||||+|.+.. ....+.||||||||+.||+||+.||...++.-++.--+...
T Consensus 1384 i~~~~~~~~~el~~~~GT~~YMAPEvit~t~~kG~~~A~DiWslGCVVlEM~tGkrPW~~~dne~aIMy~V~~g------ 1457 (1509)
T KOG4645|consen 1384 IKNNAQTMPGELQSMMGTPMYMAPEVITGTKGKGHGGAADIWSLGCVVLEMATGKRPWAELDNEWAIMYHVAAG------ 1457 (1509)
T ss_pred ecCchhcCCHHHHhhcCCchhcCchhhcccccCCCCcchhhhcccceEEEeecCCCchhhccchhHHHhHHhcc------
Confidence 765432 23578999999999997653 35679999999999999999999998765543333222211
Q ss_pred HHhhcCCCCcccCCCcccCCCcccccCCCCChhHhhhhccccccCCCCcCCHHHhhCCCCCCCCCCC
Q 011138 363 EIKCMNPNYTEFKFPQIKAHPWHKIFHKRMPPEALDLVSRLLQYSPSLRCTALEACAHPFFDDLRDP 429 (492)
Q Consensus 363 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~Li~~~L~~dP~~R~t~~e~l~Hp~f~~~~~~ 429 (492)
..|+ ++.+++.+.+|||.+||+.||.+|+++.|++.|.|-+...+.
T Consensus 1458 ------------h~Pq---------~P~~ls~~g~dFle~Cl~~dP~~Rw~~~qlle~~f~~~~~d~ 1503 (1509)
T KOG4645|consen 1458 ------------HKPQ---------IPERLSSEGRDFLEHCLEQDPKMRWTASQLLEHAFGKSCTDE 1503 (1509)
T ss_pred ------------CCCC---------CchhhhHhHHHHHHHHHhcCchhhhHHHHHHHhhcccccccc
Confidence 1122 335689999999999999999999999999999998876654
No 240
>cd05096 PTKc_DDR1 Catalytic domain of the Protein Tyrosine Kinase, Discoidin Domain Receptor 1. Protein Tyrosine Kinase (PTK) family; mammalian Discoidin Domain Receptor 1 (DDR1) and homologs; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR1 is a member of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDR1 binds to all collagens tested to date (types I-IV). It is widely expressed in many tissues. It is abundant in the brain and is also found in k
Probab=100.00 E-value=3.8e-40 Score=326.03 Aligned_cols=253 Identities=21% Similarity=0.274 Sum_probs=189.9
Q ss_pred cceeEeeeeccCCceEEEEEEEcC----------------CCCEEEEEEeccch-----hhHHHHHHHHHHcCCCCcccc
Q 011138 137 ISYMAERVVGTGSFGVVFQAKCLE----------------TGDSVAIKKVLQDK-----RYKNRELQIMRLLNHPNVVSL 195 (492)
Q Consensus 137 ~~y~~~~~lG~G~fg~Vy~~~~~~----------------~g~~vAiK~~~~~~-----~~~~~E~~il~~l~h~nIv~l 195 (492)
.+|.+.+.||+|+||.||+|.+.. ++..||+|.+.... ..+.+|+.+++.++||||+++
T Consensus 5 ~~~~~~~~lg~G~fg~V~~~~~~~~~~~~~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~ 84 (304)
T cd05096 5 GHLLFKEKLGEGQFGEVHLCEVVNPQDLPTLQFPFNVRKGRPLLVAVKILRPDANKNARNDFLKEVKILSRLKDPNIIRL 84 (304)
T ss_pred hhCeeeeEecccCCeEEEEEEeccCcccccccccccccCCcceEEEEEEecCCCCHHHHHHHHHHHHHHhhcCCCCeeEE
Confidence 469999999999999999997532 34579999885431 235579999999999999999
Q ss_pred ceeeeeccCCCceEEEEEeeechh-hHHHHhhhhhh---------------cCCCcCHHHHHHHHHHHHHHHHHHHhhCC
Q 011138 196 KHCFFSTTEKDELYLNLVLEYISE-TVYRVSKHYTR---------------MNQHVPILYVQLYTYQICRALNYLHHVVG 259 (492)
Q Consensus 196 ~~~~~~~~~~~~~~~~lV~E~~~~-~l~~~~~~~~~---------------~~~~~~~~~~~~i~~qi~~aL~yLH~~~g 259 (492)
++++.. ...+++||||+.+ ++.+.+..... ....+++..+..++.||+.||.|||+ +|
T Consensus 85 ~~~~~~-----~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~i~~al~~lH~-~~ 158 (304)
T cd05096 85 LGVCVD-----EDPLCMITEYMENGDLNQFLSSHHLDDKEENGNDAVPPAHCLPAISYSSLLHVALQIASGMKYLSS-LN 158 (304)
T ss_pred EEEEec-----CCceEEEEecCCCCcHHHHHHhccccccccccccccccccccccccHHHHHHHHHHHHHHHHHHHH-CC
Confidence 998843 3458999999986 44444432111 11346777889999999999999997 99
Q ss_pred cccCCCCCCceEEcCCCCcEEEeeecCccccCCCCC---CccceeccCccCchhhcCCCCCCcchhhHHHHHHHHHHHh-
Q 011138 260 VCHRDIKPQNLLVNPHTHQLKICDFGSAKMLVPGEP---NISYICSRYYRAPELIFGATEYTTAIDMWSIGCVLAELLL- 335 (492)
Q Consensus 260 ivHrDlKp~NILl~~~~~~vkL~DFG~a~~~~~~~~---~~~~~gt~~y~aPE~~~~~~~~~~~~DvwSlGvil~ell~- 335 (492)
|+||||||+|||++.++ .+||+|||+++....... .....++..|+|||++.+. .++.++|||||||++|+|++
T Consensus 159 ivH~dlkp~Nill~~~~-~~kl~DfG~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~-~~~~~~Dv~slG~~l~el~~~ 236 (304)
T cd05096 159 FVHRDLATRNCLVGENL-TIKIADFGMSRNLYAGDYYRIQGRAVLPIRWMAWECILMG-KFTTASDVWAFGVTLWEILML 236 (304)
T ss_pred ccccCcchhheEEcCCc-cEEECCCccceecccCceeEecCcCCCCccccCHHHHhcC-CCCchhhhHHHHHHHHHHHHc
Confidence 99999999999999887 799999999976543321 1223457889999998654 48999999999999999986
Q ss_pred -CCCCCCCCChHHHHHHHHHHhCCCCHHHHhhcCCCCcccCCCcccCCCcccccCCCCChhHhhhhccccccCCCCcCCH
Q 011138 336 -GQPLFPGESGVDQLVEIIKILGTPTREEIKCMNPNYTEFKFPQIKAHPWHKIFHKRMPPEALDLVSRLLQYSPSLRCTA 414 (492)
Q Consensus 336 -G~~pf~~~~~~~~~~~i~~~~g~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~Li~~~L~~dP~~R~t~ 414 (492)
|..||...+..+.+..+...+..... ..+ ...+..+++.+.+||.+||+.||.+|||+
T Consensus 237 ~~~~p~~~~~~~~~~~~~~~~~~~~~~------------~~~---------~~~~~~~~~~~~~li~~cl~~~p~~RPs~ 295 (304)
T cd05096 237 CKEQPYGELTDEQVIENAGEFFRDQGR------------QVY---------LFRPPPCPQGLYELMLQCWSRDCRERPSF 295 (304)
T ss_pred cCCCCCCcCCHHHHHHHHHHHhhhccc------------ccc---------ccCCCCCCHHHHHHHHHHccCCchhCcCH
Confidence 66788877665554443332110000 000 00123468899999999999999999999
Q ss_pred HHhh
Q 011138 415 LEAC 418 (492)
Q Consensus 415 ~e~l 418 (492)
.++.
T Consensus 296 ~~i~ 299 (304)
T cd05096 296 SDIH 299 (304)
T ss_pred HHHH
Confidence 9994
No 241
>cd06607 STKc_TAO Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids proteins. Serine/threonine kinases (STKs), thousand-and-one amino acids (TAO) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. They activate the MAPKs, p38 and c-Jun N-terminal kinase (JNK), by phosphorylating and activating the respective MAP/ERK kinases (MEKs, also known as MKKs or MAPKKs), MEK3/MEK6 and MKK4/MKK7. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. Vertebrates contain three TAO subfamily
Probab=100.00 E-value=4e-40 Score=326.43 Aligned_cols=250 Identities=28% Similarity=0.433 Sum_probs=202.2
Q ss_pred ceeEeeeeccCCceEEEEEEEcCCCCEEEEEEeccch-------hhHHHHHHHHHHcCCCCccccceeeeeccCCCceEE
Q 011138 138 SYMAERVVGTGSFGVVFQAKCLETGDSVAIKKVLQDK-------RYKNRELQIMRLLNHPNVVSLKHCFFSTTEKDELYL 210 (492)
Q Consensus 138 ~y~~~~~lG~G~fg~Vy~~~~~~~g~~vAiK~~~~~~-------~~~~~E~~il~~l~h~nIv~l~~~~~~~~~~~~~~~ 210 (492)
.|.+.+.||+|+||.||+|.+..+|+.||+|.+.... ....+|+.+++.++||||+++++++. +....
T Consensus 16 ~y~~~~~lg~g~~g~vy~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~~~Ei~~l~~l~h~niv~~~~~~~-----~~~~~ 90 (307)
T cd06607 16 LFTDLREIGHGSFGAVYFARDVRTNEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQQLRHPNTIEYKGCYL-----REHTA 90 (307)
T ss_pred hhhhheeecCCCCeEEEEEEEcCCCcEEEEEEEeccccCcHHHHHHHHHHHHHHHhCCCCCEEEEEEEEE-----eCCeE
Confidence 4899999999999999999999999999999875321 23457999999999999999999984 33457
Q ss_pred EEEeeechhhHHHHhhhhhhcCCCcCHHHHHHHHHHHHHHHHHHHhhCCcccCCCCCCceEEcCCCCcEEEeeecCcccc
Q 011138 211 NLVLEYISETVYRVSKHYTRMNQHVPILYVQLYTYQICRALNYLHHVVGVCHRDIKPQNLLVNPHTHQLKICDFGSAKML 290 (492)
Q Consensus 211 ~lV~E~~~~~l~~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~yLH~~~givHrDlKp~NILl~~~~~~vkL~DFG~a~~~ 290 (492)
|+||||+.+++.+.+.. ....+++..+..++.||+.||.|||+ .||+||||+|+||+++.++ .+||+|||++...
T Consensus 91 ~lv~e~~~g~l~~~~~~---~~~~l~~~~~~~~~~ql~~~L~~LH~-~~i~H~dl~p~nIl~~~~~-~~kL~dfg~~~~~ 165 (307)
T cd06607 91 WLVMEYCLGSASDILEV---HKKPLQEVEIAAICHGALQGLAYLHS-HERIHRDIKAGNILLTEPG-TVKLADFGSASLV 165 (307)
T ss_pred EEEHHhhCCCHHHHHHH---cccCCCHHHHHHHHHHHHHHHHHHHH-CCceecCCCcccEEECCCC-CEEEeecCcceec
Confidence 89999999877665432 23458899999999999999999997 9999999999999999887 7999999998754
Q ss_pred CCCCCCccceeccCccCchhhcC--CCCCCcchhhHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCCHHHHhhcC
Q 011138 291 VPGEPNISYICSRYYRAPELIFG--ATEYTTAIDMWSIGCVLAELLLGQPLFPGESGVDQLVEIIKILGTPTREEIKCMN 368 (492)
Q Consensus 291 ~~~~~~~~~~gt~~y~aPE~~~~--~~~~~~~~DvwSlGvil~ell~G~~pf~~~~~~~~~~~i~~~~g~p~~~~~~~~~ 368 (492)
.. .....+++.|+|||++.+ ...++.++|||||||++|+|++|.+||.+.+.......+... .
T Consensus 166 ~~---~~~~~~~~~y~aPE~~~~~~~~~~~~~sDv~s~G~il~el~tg~~p~~~~~~~~~~~~~~~~--~---------- 230 (307)
T cd06607 166 SP---ANSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNAMSALYHIAQN--D---------- 230 (307)
T ss_pred CC---CCCccCCccccCceeeeccCCCCCCcccchHHHHHHHHHHHcCCCCCCCccHHHHHHHHhcC--C----------
Confidence 32 234578889999998842 345788999999999999999999999877655444333210 0
Q ss_pred CCCcccCCCcccCCCcccccCCCCChhHhhhhccccccCCCCcCCHHHhhCCCCCCCCC
Q 011138 369 PNYTEFKFPQIKAHPWHKIFHKRMPPEALDLVSRLLQYSPSLRCTALEACAHPFFDDLR 427 (492)
Q Consensus 369 ~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~Li~~~L~~dP~~R~t~~e~l~Hp~f~~~~ 427 (492)
.+.. .....+.++++||.+||..||.+||++.+++.||||....
T Consensus 231 -------~~~~--------~~~~~~~~~~~li~~~l~~~p~~Rp~~~~il~~~~~~~~~ 274 (307)
T cd06607 231 -------SPTL--------SSNDWSDYFRNFVDSCLQKIPQDRPSSEELLKHRFVLRER 274 (307)
T ss_pred -------CCCC--------CchhhCHHHHHHHHHHhcCChhhCcCHHHHhcChhhcccC
Confidence 0000 0123577899999999999999999999999999998643
No 242
>KOG0584 consensus Serine/threonine protein kinase [General function prediction only]
Probab=100.00 E-value=1.6e-41 Score=341.58 Aligned_cols=249 Identities=27% Similarity=0.430 Sum_probs=202.6
Q ss_pred EeeeeccCCceEEEEEEEcCCCCEEEEEEec-----cch---hhHHHHHHHHHHcCCCCccccceeeeeccCCCceEEEE
Q 011138 141 AERVVGTGSFGVVFQAKCLETGDSVAIKKVL-----QDK---RYKNRELQIMRLLNHPNVVSLKHCFFSTTEKDELYLNL 212 (492)
Q Consensus 141 ~~~~lG~G~fg~Vy~~~~~~~g~~vAiK~~~-----~~~---~~~~~E~~il~~l~h~nIv~l~~~~~~~~~~~~~~~~l 212 (492)
...+||+|+|-+||+|.|..+|..||.-.+. +.. ..+..|+.+|+.|+|||||++|+.+.+.. ..++.+
T Consensus 44 ~~evLGrGafKtVYka~De~~giEVAWnqvk~~d~~q~~~~leR~~~Ev~lLKsL~H~NIirfy~SW~d~~---n~~in~ 120 (632)
T KOG0584|consen 44 FDEVLGRGAFKTVYKAFDEEEGIEVAWNQVKIRDVTQSPEELERLYSEVHLLKSLKHPNIIRFYDSWVDTD---NKTINF 120 (632)
T ss_pred hhhhcccccceeeeeccccccchhhHHHHHhHHHhhcChHHHHHHHHHHHHHccCCCCceeeeeeheecCC---Cceeee
Confidence 4457999999999999999999999954331 222 34557999999999999999999886543 356889
Q ss_pred EeeechhhHHHHhhhhhhcCCCcCHHHHHHHHHHHHHHHHHHHhhC--CcccCCCCCCceEEcCCCCcEEEeeecCcccc
Q 011138 213 VLEYISETVYRVSKHYTRMNQHVPILYVQLYTYQICRALNYLHHVV--GVCHRDIKPQNLLVNPHTHQLKICDFGSAKML 290 (492)
Q Consensus 213 V~E~~~~~l~~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~yLH~~~--givHrDlKp~NILl~~~~~~vkL~DFG~a~~~ 290 (492)
|+|++..|.+. .|.+..+.+....++.|++||+.||.|||+ + .|||||||.+||+|+.+.+.|||+|+|+|+..
T Consensus 121 iTEL~TSGtLr---~Y~kk~~~vn~kaik~W~RQILkGL~yLHs-~~PPIIHRDLKCDNIFinG~~G~VKIGDLGLAtl~ 196 (632)
T KOG0584|consen 121 ITELFTSGTLR---EYRKKHRRVNIKAIKSWCRQILKGLVYLHS-QDPPIIHRDLKCDNIFVNGNLGEVKIGDLGLATLL 196 (632)
T ss_pred eeecccCCcHH---HHHHHhccCCHHHHHHHHHHHHHHhhhhhc-CCCCccccccccceEEEcCCcCceeecchhHHHHh
Confidence 99999866443 344456778888999999999999999996 5 59999999999999988889999999999876
Q ss_pred CCCCCCccceeccCccCchhhcCCCCCCcchhhHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCCHHHHhhcCCC
Q 011138 291 VPGEPNISYICSRYYRAPELIFGATEYTTAIDMWSIGCVLAELLLGQPLFPGESGVDQLVEIIKILGTPTREEIKCMNPN 370 (492)
Q Consensus 291 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DvwSlGvil~ell~G~~pf~~~~~~~~~~~i~~~~g~p~~~~~~~~~~~ 370 (492)
.... ....+|||.|||||++. ..|+..+||||||+.|.||+|+..||.-..+..++.+-+.. |..+.
T Consensus 197 r~s~-aksvIGTPEFMAPEmYE--E~YnE~VDVYaFGMCmLEMvT~eYPYsEC~n~AQIYKKV~S-GiKP~--------- 263 (632)
T KOG0584|consen 197 RKSH-AKSVIGTPEFMAPEMYE--ENYNELVDVYAFGMCMLEMVTSEYPYSECTNPAQIYKKVTS-GIKPA--------- 263 (632)
T ss_pred hccc-cceeccCccccChHHHh--hhcchhhhhhhhhHHHHHHHhccCChhhhCCHHHHHHHHHc-CCCHH---------
Confidence 4433 33489999999999995 45999999999999999999999999988877776653321 11111
Q ss_pred CcccCCCcccCCCcccccCCCCChhHhhhhccccccCCCCcCCHHHhhCCCCCCCC
Q 011138 371 YTEFKFPQIKAHPWHKIFHKRMPPEALDLVSRLLQYSPSLRCTALEACAHPFFDDL 426 (492)
Q Consensus 371 ~~~~~~~~~~~~~~~~~~~~~~s~~~~~Li~~~L~~dP~~R~t~~e~l~Hp~f~~~ 426 (492)
.|.+--.+++++||.+||.. ...|+|+.|+|+||||+.-
T Consensus 264 ----------------sl~kV~dPevr~fIekCl~~-~~~R~sa~eLL~d~Ff~~d 302 (632)
T KOG0584|consen 264 ----------------ALSKVKDPEVREFIEKCLAT-KSERLSAKELLKDPFFDED 302 (632)
T ss_pred ----------------HhhccCCHHHHHHHHHHhcC-chhccCHHHHhhChhhccc
Confidence 12223368899999999999 9999999999999999863
No 243
>cd08226 PK_STRAD_beta Pseudokinase domain of STE20-related kinase adapter protein beta. Protein Kinase family, STE20-related kinase adapter protein (STRAD) beta subfamily, pseudokinase domain. The STRAD-beta subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hyperpig
Probab=100.00 E-value=1.3e-40 Score=333.21 Aligned_cols=277 Identities=20% Similarity=0.311 Sum_probs=195.8
Q ss_pred eeeccC--CceEEEEEEEcCCCCEEEEEEeccch------hhHHHHHHHHHHcCCCCccccceeeeeccCCCceEEEEEe
Q 011138 143 RVVGTG--SFGVVFQAKCLETGDSVAIKKVLQDK------RYKNRELQIMRLLNHPNVVSLKHCFFSTTEKDELYLNLVL 214 (492)
Q Consensus 143 ~~lG~G--~fg~Vy~~~~~~~g~~vAiK~~~~~~------~~~~~E~~il~~l~h~nIv~l~~~~~~~~~~~~~~~~lV~ 214 (492)
..||+| +||+||++.+..+|+.||+|++.... ..+.+|+.+++.++||||++++++| ....++++||
T Consensus 4 ~~ig~g~~~~~~v~~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~~~~l~h~niv~~~~~~-----~~~~~~~~v~ 78 (328)
T cd08226 4 VEIGRGFCNLTSVYLARHTPTGTLVTVRITDLENCTEEHLKALQNEVVLSHFFRHPNIMTSWTVF-----TTGSWLWVIS 78 (328)
T ss_pred HHhCCcccCceeEEEEEEcCCCcEEEEEEeccccCCHHHHHHHHHHHHHHHhCCCCCcceEeeeE-----ecCCceEEEE
Confidence 346666 99999999999999999999875322 3346789999999999999999998 3444689999
Q ss_pred eechh-hHHHHhhhhhhcCCCcCHHHHHHHHHHHHHHHHHHHhhCCcccCCCCCCceEEcCCCCcEEEeeecCccccCCC
Q 011138 215 EYISE-TVYRVSKHYTRMNQHVPILYVQLYTYQICRALNYLHHVVGVCHRDIKPQNLLVNPHTHQLKICDFGSAKMLVPG 293 (492)
Q Consensus 215 E~~~~-~l~~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~yLH~~~givHrDlKp~NILl~~~~~~vkL~DFG~a~~~~~~ 293 (492)
||+.+ ++..++... ....+++..+..++.||+.||+|||+ +||+||||||+|||++.++ .+|++||+.+......
T Consensus 79 e~~~~~~l~~~l~~~--~~~~~~~~~~~~~~~qi~~aL~~lH~-~~ivHrDlkp~Nill~~~~-~~~~~~~~~~~~~~~~ 154 (328)
T cd08226 79 PFMAYGSANSLLKTY--FPEGMSEALIGNILFGALRGLNYLHQ-NGYIHRNIKASHILISGDG-LVSLSGLSHLYSLVRN 154 (328)
T ss_pred ecccCCCHHHHHHhh--cccCCCHHHHHHHHHHHHHHHHHHHh-CCeecCCCCHHHEEEeCCC-cEEEechHHHhhhhcc
Confidence 99986 444443332 13458889999999999999999997 9999999999999999887 7999999865332211
Q ss_pred CCC--------ccceeccCccCchhhcCC-CCCCcchhhHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCCHH--
Q 011138 294 EPN--------ISYICSRYYRAPELIFGA-TEYTTAIDMWSIGCVLAELLLGQPLFPGESGVDQLVEIIKILGTPTRE-- 362 (492)
Q Consensus 294 ~~~--------~~~~gt~~y~aPE~~~~~-~~~~~~~DvwSlGvil~ell~G~~pf~~~~~~~~~~~i~~~~g~p~~~-- 362 (492)
... ....++..|+|||++.+. ..++.++|||||||++|+|++|.+||........+..+.......+..
T Consensus 155 ~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~DiwslG~~l~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~ 234 (328)
T cd08226 155 GQKAKVVYDFPQFSTSVLPWLSPELLRQDLYGYNVKSDIYSVGITACELATGRVPFQDMLRTQMLLQKLKGPPYSPLDIT 234 (328)
T ss_pred CccccccccccccccCccCccChhhhcCCCCCCCchhhHHHHHHHHHHHHhCCCCCCCcChHHHHHHHhcCCCCCCcccc
Confidence 110 012345679999998654 347899999999999999999999998876555444433211100000
Q ss_pred -------HHhhcCCCCc----ccCCC-----cccCCCcccccCCCCChhHhhhhccccccCCCCcCCHHHhhCCCCCCCC
Q 011138 363 -------EIKCMNPNYT----EFKFP-----QIKAHPWHKIFHKRMPPEALDLVSRLLQYSPSLRCTALEACAHPFFDDL 426 (492)
Q Consensus 363 -------~~~~~~~~~~----~~~~~-----~~~~~~~~~~~~~~~s~~~~~Li~~~L~~dP~~R~t~~e~l~Hp~f~~~ 426 (492)
.+......+. +.... ......+.......+++++++||++||+.||++|||+.++++||||+.+
T Consensus 235 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~Rpta~e~l~~~~~~~~ 314 (328)
T cd08226 235 TFPCEESRMKNSQSGVDSGIGESVVAAGMTQTMTSERLRTPSSKTFSPAFQNLVELCLQQDPEKRPSASSLLSHAFFKQV 314 (328)
T ss_pred ccchhhhhhccchhhhhcccccchhccccccccccccccchhhhhhhHHHHHHHHHHccCCcccCCCHHHHhhCHHHHHH
Confidence 0000000000 00000 0000011111123467889999999999999999999999999999987
Q ss_pred CC
Q 011138 427 RD 428 (492)
Q Consensus 427 ~~ 428 (492)
..
T Consensus 315 ~~ 316 (328)
T cd08226 315 KE 316 (328)
T ss_pred HH
Confidence 65
No 244
>cd06621 PKc_MAPKK_Pek1_like Catalytic domain of fungal Pek1-like dual-specificity MAP kinase kinases. Protein kinases (PKs), MAP kinase kinase(MAPKK) subfamily, fungal Pek1-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include
Probab=100.00 E-value=1.2e-39 Score=319.90 Aligned_cols=265 Identities=24% Similarity=0.383 Sum_probs=200.8
Q ss_pred ceeEeeeeccCCceEEEEEEEcCCCCEEEEEEeccc-----hhhHHHHHHHHHHcCCCCccccceeeeeccCCCceEEEE
Q 011138 138 SYMAERVVGTGSFGVVFQAKCLETGDSVAIKKVLQD-----KRYKNRELQIMRLLNHPNVVSLKHCFFSTTEKDELYLNL 212 (492)
Q Consensus 138 ~y~~~~~lG~G~fg~Vy~~~~~~~g~~vAiK~~~~~-----~~~~~~E~~il~~l~h~nIv~l~~~~~~~~~~~~~~~~l 212 (492)
+|...+.||.|++|.||+|.+..+++.||+|.+... .....+|+++++.++||||++++++|... +...+|+
T Consensus 2 ~~~~~~~lg~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~---~~~~~~l 78 (287)
T cd06621 2 KIVELSRLGEGAGGSVTKCRLKNTGMIFALKTITTDPNPDLQKQILRELEINKSCKSPYIVKYYGAFLDE---SSSSIGI 78 (287)
T ss_pred ceEEEEEeccCCceEEEEEEECCCCeEEEEEEEecCCchHHHHHHHHHHHHHHhCCCCCeeeeeeEEEcc---CCCeEEE
Confidence 588999999999999999999999999999988643 23355799999999999999999988542 2345789
Q ss_pred Eeeechhh-HHHHhhhhhhcCCCcCHHHHHHHHHHHHHHHHHHHhhCCcccCCCCCCceEEcCCCCcEEEeeecCccccC
Q 011138 213 VLEYISET-VYRVSKHYTRMNQHVPILYVQLYTYQICRALNYLHHVVGVCHRDIKPQNLLVNPHTHQLKICDFGSAKMLV 291 (492)
Q Consensus 213 V~E~~~~~-l~~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~yLH~~~givHrDlKp~NILl~~~~~~vkL~DFG~a~~~~ 291 (492)
||||++++ |.+.+.........+++..+..++.||+.||.|||+ .|++|+||+|+||+++.++ .++|+|||++....
T Consensus 79 v~e~~~~~~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~lH~-~~i~H~dl~~~nil~~~~~-~~~l~dfg~~~~~~ 156 (287)
T cd06621 79 AMEYCEGGSLDSIYKKVKKRGGRIGEKVLGKIAESVLKGLSYLHS-RKIIHRDIKPSNILLTRKG-QVKLCDFGVSGELV 156 (287)
T ss_pred EEEecCCCCHHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHH-CCcccCCCCHHHEEEecCC-eEEEeecccccccc
Confidence 99999864 444444333345668889999999999999999997 9999999999999999887 79999999987543
Q ss_pred CCCCCccceeccCccCchhhcCCCCCCcchhhHHHHHHHHHHHhCCCCCCCCChH-HHHHHHHHHhCCCCHHHHhhcCCC
Q 011138 292 PGEPNISYICSRYYRAPELIFGATEYTTAIDMWSIGCVLAELLLGQPLFPGESGV-DQLVEIIKILGTPTREEIKCMNPN 370 (492)
Q Consensus 292 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DvwSlGvil~ell~G~~pf~~~~~~-~~~~~i~~~~g~p~~~~~~~~~~~ 370 (492)
... .....++..|+|||.+.+. .++.++|||||||++|+|++|..||...... ....+....+.....
T Consensus 157 ~~~-~~~~~~~~~y~~pE~~~~~-~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~--------- 225 (287)
T cd06621 157 NSL-AGTFTGTSFYMAPERIQGK-PYSITSDVWSLGLTLLEVAQNRFPFPPEGEPPLGPIELLSYIVNMPN--------- 225 (287)
T ss_pred ccc-cccccCCccccCHHHhcCC-CCCchhhHHHHHHHHHHHHhCCCCCCcccCCCCChHHHHHHHhcCCc---------
Confidence 222 2245678899999998654 5899999999999999999999999865220 000111111111000
Q ss_pred CcccCCCcccCCCcccccCCCCChhHhhhhccccccCCCCcCCHHHhhCCCCCCCCC
Q 011138 371 YTEFKFPQIKAHPWHKIFHKRMPPEALDLVSRLLQYSPSLRCTALEACAHPFFDDLR 427 (492)
Q Consensus 371 ~~~~~~~~~~~~~~~~~~~~~~s~~~~~Li~~~L~~dP~~R~t~~e~l~Hp~f~~~~ 427 (492)
..++.... .....++++.+||.+||..||.+|||+.|++.||||+...
T Consensus 226 ---~~~~~~~~------~~~~~~~~~~~li~~~l~~~p~~Rpt~~eil~~~~~~~~~ 273 (287)
T cd06621 226 ---PELKDEPG------NGIKWSEEFKDFIKQCLEKDPTRRPTPWDMLEHPWIKAQM 273 (287)
T ss_pred ---hhhccCCC------CCCchHHHHHHHHHHHcCCCcccCCCHHHHHhCccccccc
Confidence 00000000 0012467899999999999999999999999999997654
No 245
>cd05611 STKc_Rim15_like Catalytic domain of fungal Rim15-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, fungal Rim15-like kinases, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include Saccharomyces cerevisiae Rim15, Schizosaccharomyces pombe cek1, and similar fungal proteins. They contain a central catalytic domain, which contains an insert relative to MAST kinases. In addition, Rim15 contains a C-terminal signal receiver (REC) domain while cek1 contains an N-terminal PAS domain. Rim15 (or Rim15p) functions as a regulator of meiosis. It acts as a do
Probab=100.00 E-value=4.9e-40 Score=317.42 Aligned_cols=245 Identities=33% Similarity=0.536 Sum_probs=191.7
Q ss_pred eeeccCCceEEEEEEEcCCCCEEEEEEeccchh-------hHHHHHHH-HHHcCCCCccccceeeeeccCCCceEEEEEe
Q 011138 143 RVVGTGSFGVVFQAKCLETGDSVAIKKVLQDKR-------YKNRELQI-MRLLNHPNVVSLKHCFFSTTEKDELYLNLVL 214 (492)
Q Consensus 143 ~~lG~G~fg~Vy~~~~~~~g~~vAiK~~~~~~~-------~~~~E~~i-l~~l~h~nIv~l~~~~~~~~~~~~~~~~lV~ 214 (492)
+.||.|+||.||+|.+..+|+.||||.+.+... ....|..+ ...++|+||+++++++ .....+|+||
T Consensus 2 ~~l~~g~~~~v~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~i~~~~~~~-----~~~~~~~lv~ 76 (260)
T cd05611 2 KPISKGAFGSVYLAKKRSTGDYFAIKVLKKSDMIAKNQVTNVKAERAIMMIQGESPYVAKLYYSF-----QSKDYLYLVM 76 (260)
T ss_pred ccCCcCCCeeEEEEEecCCCCeEEEEEecchhhhHHHHHHHHHHHHHHHhhcCCCCCeeeeeeeE-----EcCCeEEEEE
Confidence 468999999999999999999999998854321 11234443 3455899999999988 3444689999
Q ss_pred eechhhHH-HHhhhhhhcCCCcCHHHHHHHHHHHHHHHHHHHhhCCcccCCCCCCceEEcCCCCcEEEeeecCccccCCC
Q 011138 215 EYISETVY-RVSKHYTRMNQHVPILYVQLYTYQICRALNYLHHVVGVCHRDIKPQNLLVNPHTHQLKICDFGSAKMLVPG 293 (492)
Q Consensus 215 E~~~~~l~-~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~yLH~~~givHrDlKp~NILl~~~~~~vkL~DFG~a~~~~~~ 293 (492)
||+.++.+ .++. ....+++..+..++.||+.||.|||+ .||+||||+|+||+++.++ .+||+|||++.....
T Consensus 77 e~~~~~~L~~~l~----~~~~~~~~~~~~i~~qi~~aL~~lH~-~~i~H~dl~p~nil~~~~~-~~~l~dfg~~~~~~~- 149 (260)
T cd05611 77 EYLNGGDCASLIK----TLGGLPEDWAKQYIAEVVLGVEDLHQ-RGIIHRDIKPENLLIDQTG-HLKLTDFGLSRNGLE- 149 (260)
T ss_pred eccCCCCHHHHHH----HcCCCCHHHHHHHHHHHHHHHHHHHH-CCeecCCCCHHHeEECCCC-cEEEeecccceeccc-
Confidence 99986544 3332 23568899999999999999999997 9999999999999999877 799999999875432
Q ss_pred CCCccceeccCccCchhhcCCCCCCcchhhHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCCHHHHhhcCCCCcc
Q 011138 294 EPNISYICSRYYRAPELIFGATEYTTAIDMWSIGCVLAELLLGQPLFPGESGVDQLVEIIKILGTPTREEIKCMNPNYTE 373 (492)
Q Consensus 294 ~~~~~~~gt~~y~aPE~~~~~~~~~~~~DvwSlGvil~ell~G~~pf~~~~~~~~~~~i~~~~g~p~~~~~~~~~~~~~~ 373 (492)
.....++..|+|||.+.+.. ++.++|||||||++|+|++|..||...+.......+... .
T Consensus 150 --~~~~~~~~~y~~pe~~~~~~-~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~-----------------~ 209 (260)
T cd05611 150 --NKKFVGTPDYLAPETILGVG-DDKMSDWWSLGCVIFEFLFGYPPFHAETPDAVFDNILSR-----------------R 209 (260)
T ss_pred --cccCCCCcCccChhhhcCCC-CcchhhhHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHhc-----------------c
Confidence 23456888999999987655 899999999999999999999999887665544433221 0
Q ss_pred cCCCcccCCCcccccCCCCChhHhhhhccccccCCCCcCC---HHHhhCCCCCCCCC
Q 011138 374 FKFPQIKAHPWHKIFHKRMPPEALDLVSRLLQYSPSLRCT---ALEACAHPFFDDLR 427 (492)
Q Consensus 374 ~~~~~~~~~~~~~~~~~~~s~~~~~Li~~~L~~dP~~R~t---~~e~l~Hp~f~~~~ 427 (492)
..++ ......+++++.++|.+||+.||++||+ +.|++.||||+++.
T Consensus 210 ~~~~--------~~~~~~~~~~~~~~i~~~l~~~p~~R~~~~~~~~~l~~~~~~~~~ 258 (260)
T cd05611 210 INWP--------EEVKEFCSPEAVDLINRLLCMDPAKRLGANGYQEIKSHPFFKSIN 258 (260)
T ss_pred cCCC--------CcccccCCHHHHHHHHHHccCCHHHccCCCcHHHHHcChHhhcCC
Confidence 0111 1112347899999999999999999995 47999999998764
No 246
>cd06642 STKc_STK25-YSK1 Catalytic domain of the Protein Serine/Threonine Kinase, STK25 or Yeast Sps1/Ste20-related kinase 1. Serine/threonine kinases (STKs), STK25 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The STK25 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. STK25 is also called Ste20/oxidant stress response kinase 1 (SOK1) or yeast Sps1/Ste20-related kinase 1 (YSK1). STK25 is localized in the Golgi apparatus through its interaction with the Golgi matrix protein GM130. It may play a role in the regulation of cell migration and polarization. STK25 binds and phosphorylates CCM3 (cerebral cavernous malformation 3), also called PCD10 (programmed cell death 10), and may play a role in apoptosis. Human STK25
Probab=100.00 E-value=1.1e-40 Score=325.21 Aligned_cols=250 Identities=24% Similarity=0.364 Sum_probs=199.7
Q ss_pred ceeEeeeeccCCceEEEEEEEcCCCCEEEEEEeccch-----hhHHHHHHHHHHcCCCCccccceeeeeccCCCceEEEE
Q 011138 138 SYMAERVVGTGSFGVVFQAKCLETGDSVAIKKVLQDK-----RYKNRELQIMRLLNHPNVVSLKHCFFSTTEKDELYLNL 212 (492)
Q Consensus 138 ~y~~~~~lG~G~fg~Vy~~~~~~~g~~vAiK~~~~~~-----~~~~~E~~il~~l~h~nIv~l~~~~~~~~~~~~~~~~l 212 (492)
.|...+.||+|+||.||+|.+..++..||+|.+.... ....+|+.+++.++||||+++++++ .+..+.|+
T Consensus 5 ~y~~~~~l~~g~~~~vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~-----~~~~~~~l 79 (277)
T cd06642 5 LFTKLERIGKGSFGEVYKGIDNRTKEVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYITRYYGSY-----LKGTKLWI 79 (277)
T ss_pred HHHHHHHhcCCCCeeEEEEEEcCCCeEEEEEEeccccchHHHHHHHHHHHHHHcCCCCccHhhhccc-----ccCCceEE
Confidence 3777888999999999999999999999999875322 2356799999999999999999988 44456899
Q ss_pred EeeechhhHHHHhhhhhhcCCCcCHHHHHHHHHHHHHHHHHHHhhCCcccCCCCCCceEEcCCCCcEEEeeecCccccCC
Q 011138 213 VLEYISETVYRVSKHYTRMNQHVPILYVQLYTYQICRALNYLHHVVGVCHRDIKPQNLLVNPHTHQLKICDFGSAKMLVP 292 (492)
Q Consensus 213 V~E~~~~~l~~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~yLH~~~givHrDlKp~NILl~~~~~~vkL~DFG~a~~~~~ 292 (492)
||||++++.+..... ...+++..++.++.||+.||.|||+ +|++|+||+|+||+++.++ .++|+|||++.....
T Consensus 80 v~e~~~~~~L~~~~~----~~~~~~~~~~~~~~~i~~~l~~lH~-~~ivH~dl~p~ni~i~~~~-~~~l~dfg~~~~~~~ 153 (277)
T cd06642 80 IMEYLGGGSALDLLK----PGPLEETYIATILREILKGLDYLHS-ERKIHRDIKAANVLLSEQG-DVKLADFGVAGQLTD 153 (277)
T ss_pred EEEccCCCcHHHHhh----cCCCCHHHHHHHHHHHHHHHHHHhc-CCeeccCCChheEEEeCCC-CEEEccccccccccC
Confidence 999999754432211 2467888999999999999999997 9999999999999999877 799999999976543
Q ss_pred CCC-CccceeccCccCchhhcCCCCCCcchhhHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCCHHHHhhcCCCC
Q 011138 293 GEP-NISYICSRYYRAPELIFGATEYTTAIDMWSIGCVLAELLLGQPLFPGESGVDQLVEIIKILGTPTREEIKCMNPNY 371 (492)
Q Consensus 293 ~~~-~~~~~gt~~y~aPE~~~~~~~~~~~~DvwSlGvil~ell~G~~pf~~~~~~~~~~~i~~~~g~p~~~~~~~~~~~~ 371 (492)
... .....++..|+|||.+.+. .++.++|+|||||++|+|++|..||...........+..
T Consensus 154 ~~~~~~~~~~~~~y~aPE~~~~~-~~~~~~Dv~slG~il~el~tg~~p~~~~~~~~~~~~~~~----------------- 215 (277)
T cd06642 154 TQIKRNTFVGTPFWMAPEVIKQS-AYDFKADIWSLGITAIELAKGEPPNSDLHPMRVLFLIPK----------------- 215 (277)
T ss_pred cchhhhcccCcccccCHHHhCcC-CCchhhhHHHHHHHHHHHHhCCCCCcccchhhHHhhhhc-----------------
Confidence 321 2234678899999998654 488999999999999999999999976544332222111
Q ss_pred cccCCCcccCCCcccccCCCCChhHhhhhccccccCCCCcCCHHHhhCCCCCCCCC
Q 011138 372 TEFKFPQIKAHPWHKIFHKRMPPEALDLVSRLLQYSPSLRCTALEACAHPFFDDLR 427 (492)
Q Consensus 372 ~~~~~~~~~~~~~~~~~~~~~s~~~~~Li~~~L~~dP~~R~t~~e~l~Hp~f~~~~ 427 (492)
...+ .+...++.++.+||.+||..+|.+||++.++++||||..+.
T Consensus 216 --~~~~---------~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~il~~~~~~~~~ 260 (277)
T cd06642 216 --NSPP---------TLEGQYSKPFKEFVEACLNKDPRFRPTAKELLKHKFITRYT 260 (277)
T ss_pred --CCCC---------CCCcccCHHHHHHHHHHccCCcccCcCHHHHHHhHHHHHHh
Confidence 0000 01234678899999999999999999999999999998765
No 247
>cd06605 PKc_MAPKK Catalytic domain of the dual-specificity Protein Kinase, Mitogen-Activated Protein Kinase Kinase. Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK or MAP2K), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK or MAP3K). MAPKKs are dual-specificity
Probab=100.00 E-value=3.2e-40 Score=319.34 Aligned_cols=255 Identities=29% Similarity=0.509 Sum_probs=199.1
Q ss_pred ceeEeeeeccCCceEEEEEEEcCCCCEEEEEEeccch-----hhHHHHHHHHHHcCCCCccccceeeeeccCCCceEEEE
Q 011138 138 SYMAERVVGTGSFGVVFQAKCLETGDSVAIKKVLQDK-----RYKNRELQIMRLLNHPNVVSLKHCFFSTTEKDELYLNL 212 (492)
Q Consensus 138 ~y~~~~~lG~G~fg~Vy~~~~~~~g~~vAiK~~~~~~-----~~~~~E~~il~~l~h~nIv~l~~~~~~~~~~~~~~~~l 212 (492)
+|...+.||.|+||.||+|.+..+++.||+|.+.... ....+|+++++.++||||+++++++. ....+++
T Consensus 2 ~~~~~~~ig~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~-----~~~~~~l 76 (265)
T cd06605 2 DLEYLGELGAGNSGVVSKVLHRPTGKIMAVKTIRLEINEAIQKQILRELDILHKCNSPYIVGFYGAFY-----NNGDISI 76 (265)
T ss_pred cchHHHHhcCCCCeEEEEEEEcCCCcEEEEEEEecccChHHHHHHHHHHHHHHHCCCCchhhhheeee-----cCCEEEE
Confidence 4778889999999999999999999999999875432 23457999999999999999999883 3456899
Q ss_pred Eeeechh-hHHHHhhhhhhcCCCcCHHHHHHHHHHHHHHHHHHHhhCCcccCCCCCCceEEcCCCCcEEEeeecCccccC
Q 011138 213 VLEYISE-TVYRVSKHYTRMNQHVPILYVQLYTYQICRALNYLHHVVGVCHRDIKPQNLLVNPHTHQLKICDFGSAKMLV 291 (492)
Q Consensus 213 V~E~~~~-~l~~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~yLH~~~givHrDlKp~NILl~~~~~~vkL~DFG~a~~~~ 291 (492)
|+||+++ .+.+++.. ....+++..+..++.||+.||.|||+..|++|+||||+||+++.++ .++|+|||.+....
T Consensus 77 v~e~~~~~~L~~~~~~---~~~~~~~~~~~~~~~~l~~~l~~lH~~~~i~H~dl~~~ni~~~~~~-~~~l~d~g~~~~~~ 152 (265)
T cd06605 77 CMEYMDGGSLDKILKE---VQGRIPERILGKIAVAVLKGLTYLHEKHKIIHRDVKPSNILVNSRG-QIKLCDFGVSGQLV 152 (265)
T ss_pred EEEecCCCcHHHHHHH---ccCCCCHHHHHHHHHHHHHHHHHHcCCCCeecCCCCHHHEEECCCC-CEEEeecccchhhH
Confidence 9999995 44444332 1267888999999999999999999537999999999999999877 79999999987653
Q ss_pred CCCCCccceeccCccCchhhcCCCCCCcchhhHHHHHHHHHHHhCCCCCCCCCh-HHHHHHHHHH-hCCCCHHHHhhcCC
Q 011138 292 PGEPNISYICSRYYRAPELIFGATEYTTAIDMWSIGCVLAELLLGQPLFPGESG-VDQLVEIIKI-LGTPTREEIKCMNP 369 (492)
Q Consensus 292 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DvwSlGvil~ell~G~~pf~~~~~-~~~~~~i~~~-~g~p~~~~~~~~~~ 369 (492)
..... ...++..|+|||.+.+. .++.++|||||||++|+|++|..||...+. .+.....++. ...+
T Consensus 153 ~~~~~-~~~~~~~y~~PE~~~~~-~~~~~~Dv~slG~~l~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~---------- 220 (265)
T cd06605 153 NSLAK-TFVGTSSYMAPERIQGN-DYSVKSDIWSLGLSLIELATGRFPYPPENDPPDGIFELLQYIVNEP---------- 220 (265)
T ss_pred HHHhh-cccCChhccCHHHHcCC-CCCchhhHHHHHHHHHHHHhCCCCCCccccccccHHHHHHHHhcCC----------
Confidence 22222 26788999999998665 589999999999999999999999976421 1111111111 1000
Q ss_pred CCcccCCCcccCCCcccccCCCCChhHhhhhccccccCCCCcCCHHHhhCCCCCCCCC
Q 011138 370 NYTEFKFPQIKAHPWHKIFHKRMPPEALDLVSRLLQYSPSLRCTALEACAHPFFDDLR 427 (492)
Q Consensus 370 ~~~~~~~~~~~~~~~~~~~~~~~s~~~~~Li~~~L~~dP~~R~t~~e~l~Hp~f~~~~ 427 (492)
.+.. ....+++++++||.+||..||.+|||+.+++.||||+.+.
T Consensus 221 ------~~~~--------~~~~~~~~~~~li~~~l~~~p~~Rpt~~~ll~~~~~~~~~ 264 (265)
T cd06605 221 ------PPRL--------PSGKFSPDFQDFVNLCLIKDPRERPSYKELLEHPFIKKYE 264 (265)
T ss_pred ------CCCC--------ChhhcCHHHHHHHHHHcCCCchhCcCHHHHhhCchhhccc
Confidence 0000 0012688999999999999999999999999999998753
No 248
>cd06618 PKc_MKK7 Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 7. Protein kinases (PKs), MAP kinase kinase 7 (MKK7) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK7 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK7 is a dual-specificity PK that phosphorylates and activates it
Probab=100.00 E-value=1.1e-39 Score=321.50 Aligned_cols=260 Identities=25% Similarity=0.387 Sum_probs=200.7
Q ss_pred ccccceeEeeeeccCCceEEEEEEEcCCCCEEEEEEeccch-----hhHHHHHHHHHHc-CCCCccccceeeeeccCCCc
Q 011138 134 KQTISYMAERVVGTGSFGVVFQAKCLETGDSVAIKKVLQDK-----RYKNRELQIMRLL-NHPNVVSLKHCFFSTTEKDE 207 (492)
Q Consensus 134 ~~~~~y~~~~~lG~G~fg~Vy~~~~~~~g~~vAiK~~~~~~-----~~~~~E~~il~~l-~h~nIv~l~~~~~~~~~~~~ 207 (492)
....+|.+.+.||+|+||.||+|.+..+++.||||.+.... ....+|+.++..+ .||||+++++++ .+.
T Consensus 12 ~~~~~~~~~~~lg~g~~~~v~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~e~~~~~~~~~~~~i~~~~~~~-----~~~ 86 (296)
T cd06618 12 ADLNDLENLGEIGSGTCGQVYKMRFKKTGHVMAVKQMRRTGNKEENKRILMDLDVVLKSHDCPYIVKCYGYF-----ITD 86 (296)
T ss_pred CCcchheeeeEeeccCCeEEEEEEECCCCeEEEEEEEeccCChHHHHHHHHHHHHHHhccCCCchHhhheee-----ecC
Confidence 34457999999999999999999999899999999985421 1223466656555 499999999998 444
Q ss_pred eEEEEEeeechhhHHHHhhhhhhcCCCcCHHHHHHHHHHHHHHHHHHHhhCCcccCCCCCCceEEcCCCCcEEEeeecCc
Q 011138 208 LYLNLVLEYISETVYRVSKHYTRMNQHVPILYVQLYTYQICRALNYLHHVVGVCHRDIKPQNLLVNPHTHQLKICDFGSA 287 (492)
Q Consensus 208 ~~~~lV~E~~~~~l~~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~yLH~~~givHrDlKp~NILl~~~~~~vkL~DFG~a 287 (492)
.++|+||||+++.+..+... ....+++..+..++.||+.||.|||+..||+||||+|+||+++.++ .+||+|||++
T Consensus 87 ~~~~~v~e~~~~~l~~l~~~---~~~~l~~~~~~~i~~~i~~~l~~lH~~~~i~H~dl~p~nill~~~~-~~kL~dfg~~ 162 (296)
T cd06618 87 SDVFICMELMSTCLDKLLKR---IQGPIPEDILGKMTVAIVKALHYLKEKHGVIHRDVKPSNILLDASG-NVKLCDFGIS 162 (296)
T ss_pred CeEEEEeeccCcCHHHHHHH---hcCCCCHHHHHHHHHHHHHHHHHHHhhCCEecCCCcHHHEEEcCCC-CEEECccccc
Confidence 56899999998766555433 2347888899999999999999999525999999999999999877 8999999998
Q ss_pred cccCCCCCCccceeccCccCchhhcCC---CCCCcchhhHHHHHHHHHHHhCCCCCCCCChH-HHHHHHHHHhCCCCHHH
Q 011138 288 KMLVPGEPNISYICSRYYRAPELIFGA---TEYTTAIDMWSIGCVLAELLLGQPLFPGESGV-DQLVEIIKILGTPTREE 363 (492)
Q Consensus 288 ~~~~~~~~~~~~~gt~~y~aPE~~~~~---~~~~~~~DvwSlGvil~ell~G~~pf~~~~~~-~~~~~i~~~~g~p~~~~ 363 (492)
.............++..|+|||.+.+. ..++.++|||||||++|+|++|+.||...... +.+..+.. ..
T Consensus 163 ~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~~~~~~~~~~---~~---- 235 (296)
T cd06618 163 GRLVDSKAKTRSAGCAAYMAPERIDPPDPNPKYDIRADVWSLGISLVELATGQFPYKNCKTEFEVLTKILQ---EE---- 235 (296)
T ss_pred hhccCCCcccCCCCCccccCHhhcCCCCCccccccchhHHHHHHHHHHHHhCCCCCCcchhHHHHHHHHhc---CC----
Confidence 766444333445678899999998644 24788999999999999999999999764332 22222211 00
Q ss_pred HhhcCCCCcccCCCcccCCCcccccCCCCChhHhhhhccccccCCCCcCCHHHhhCCCCCCCCCC
Q 011138 364 IKCMNPNYTEFKFPQIKAHPWHKIFHKRMPPEALDLVSRLLQYSPSLRCTALEACAHPFFDDLRD 428 (492)
Q Consensus 364 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~Li~~~L~~dP~~R~t~~e~l~Hp~f~~~~~ 428 (492)
...++. ...+++++.+||.+||..||.+||++.+++.||||+....
T Consensus 236 ---------~~~~~~----------~~~~~~~l~~li~~~l~~~p~~Rp~~~~il~~~~~~~~~~ 281 (296)
T cd06618 236 ---------PPSLPP----------NEGFSPDFCSFVDLCLTKDHRKRPKYRELLQHPFIRRYET 281 (296)
T ss_pred ---------CCCCCC----------CCCCCHHHHHHHHHHccCChhhCCCHHHHhcChhhhccch
Confidence 000000 0136788999999999999999999999999999997653
No 249
>cd06620 PKc_MAPKK_Byr1_like Catalytic domain of fungal Byr1-like dual-specificity MAP kinase kinases. Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, fungal Byr1-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include
Probab=100.00 E-value=4.5e-40 Score=322.20 Aligned_cols=256 Identities=29% Similarity=0.448 Sum_probs=199.7
Q ss_pred cceeEeeeeccCCceEEEEEEEcCCCCEEEEEEeccc-----hhhHHHHHHHHHHcCCCCccccceeeeeccCCCceEEE
Q 011138 137 ISYMAERVVGTGSFGVVFQAKCLETGDSVAIKKVLQD-----KRYKNRELQIMRLLNHPNVVSLKHCFFSTTEKDELYLN 211 (492)
Q Consensus 137 ~~y~~~~~lG~G~fg~Vy~~~~~~~g~~vAiK~~~~~-----~~~~~~E~~il~~l~h~nIv~l~~~~~~~~~~~~~~~~ 211 (492)
.+|++.+.||+|+||+||++.+..+|+.||+|++... .....+|+++++.++||||+++++++ .+..+++
T Consensus 5 ~~~~~~~~ig~g~~g~v~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~-----~~~~~~~ 79 (284)
T cd06620 5 EDLETISDLGAGNGGSVSKVKHIPTGTVMAKKVVHIGAKSSVRKQILRELQIMHECRSPYIVSFYGAF-----LNENNIC 79 (284)
T ss_pred HHHHHHHHcCCCCCeEEEEEEEcCCCcEEEEEEEEecCcchHHHHHHHHHHHHHHcCCCCcceEeeeE-----ecCCEEE
Confidence 4689999999999999999999999999999987543 23445799999999999999999998 3445689
Q ss_pred EEeeechhhHHHHhhhhhhcCCCcCHHHHHHHHHHHHHHHHHHHhhCCcccCCCCCCceEEcCCCCcEEEeeecCccccC
Q 011138 212 LVLEYISETVYRVSKHYTRMNQHVPILYVQLYTYQICRALNYLHHVVGVCHRDIKPQNLLVNPHTHQLKICDFGSAKMLV 291 (492)
Q Consensus 212 lV~E~~~~~l~~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~yLH~~~givHrDlKp~NILl~~~~~~vkL~DFG~a~~~~ 291 (492)
+||||++++.+.... .....+++..+..++.|++.||.|||+.+|++||||||+||+++.++ .++|+|||++....
T Consensus 80 lv~e~~~~~~L~~~~---~~~~~~~~~~~~~~~~~i~~~l~~LH~~~~i~H~dl~p~nil~~~~~-~~~l~d~gl~~~~~ 155 (284)
T cd06620 80 MCMEFMDCGSLDRIY---KKGGPIPVEILGKIAVAVVEGLTYLYNVHRIMHRDIKPSNILVNSRG-QIKLCDFGVSGELI 155 (284)
T ss_pred EEEecCCCCCHHHHH---HhccCCCHHHHHHHHHHHHHHHHHHHHhcCeeccCCCHHHEEECCCC-cEEEccCCcccchh
Confidence 999999976544321 12346889999999999999999999636999999999999999877 79999999986542
Q ss_pred CCCCCccceeccCccCchhhcCCCCCCcchhhHHHHHHHHHHHhCCCCCCCCChHHH-------HHHHHHHhCCCCHHHH
Q 011138 292 PGEPNISYICSRYYRAPELIFGATEYTTAIDMWSIGCVLAELLLGQPLFPGESGVDQ-------LVEIIKILGTPTREEI 364 (492)
Q Consensus 292 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DvwSlGvil~ell~G~~pf~~~~~~~~-------~~~i~~~~g~p~~~~~ 364 (492)
.. ......|+..|+|||++.+. .++.++|+|||||++|+|++|..||......+. +..+.... +
T Consensus 156 ~~-~~~~~~~~~~~~aPE~~~~~-~~~~~~Di~slG~~l~~l~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~-------~ 226 (284)
T cd06620 156 NS-IADTFVGTSTYMSPERIQGG-KYTVKSDVWSLGISIIELALGKFPFAFSNIDDDGQDDPMGILDLLQQI-------V 226 (284)
T ss_pred hh-ccCccccCcccCCHHHHccC-CCCccchHHHHHHHHHHHHhCCCCCcccchhhhhhhhhhHHHHHHHHH-------h
Confidence 22 22345789999999998654 588999999999999999999999986554211 11111100 0
Q ss_pred hhcCCCCcccCCCcccCCCcccccCCCCChhHhhhhccccccCCCCcCCHHHhhCCCCCCCC
Q 011138 365 KCMNPNYTEFKFPQIKAHPWHKIFHKRMPPEALDLVSRLLQYSPSLRCTALEACAHPFFDDL 426 (492)
Q Consensus 365 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~Li~~~L~~dP~~R~t~~e~l~Hp~f~~~ 426 (492)
.. ....++ ...++.++.+||.+||..||.+|||+.|+++|+||.+-
T Consensus 227 ~~-----~~~~~~-----------~~~~~~~~~~li~~~l~~dp~~Rpt~~e~~~~~~~~~~ 272 (284)
T cd06620 227 QE-----PPPRLP-----------SSDFPEDLRDFVDACLLKDPTERPTPQQLCAMPPFIQA 272 (284)
T ss_pred hc-----cCCCCC-----------chhcCHHHHHHHHHHhcCCcccCcCHHHHhcCcccccc
Confidence 00 000000 01267889999999999999999999999999999764
No 250
>cd06917 STKc_NAK1_like Catalytic domain of Fungal Nak1-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), Nak1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nak1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of Schizosaccharomyces pombe Nak1, Saccharomyces cerevisiae Kic1p (kinase that interacts with Cdc31p) and related proteins. Nak1 (also known as N-rich kinase 1), is required by fission yeast for polarizing the tips of actin cytoskeleton and is involved in cell growth, cell separation, cell morphology and cell-cycle progression. Kic1p is required by budding yeast for cell integrity and morphogenesis. Kic1p interacts with Cdc31p, the yeast homologue of cent
Probab=100.00 E-value=5e-40 Score=320.42 Aligned_cols=252 Identities=27% Similarity=0.465 Sum_probs=200.6
Q ss_pred ceeEeeeeccCCceEEEEEEEcCCCCEEEEEEeccc-----hhhHHHHHHHHHHcC---CCCccccceeeeeccCCCceE
Q 011138 138 SYMAERVVGTGSFGVVFQAKCLETGDSVAIKKVLQD-----KRYKNRELQIMRLLN---HPNVVSLKHCFFSTTEKDELY 209 (492)
Q Consensus 138 ~y~~~~~lG~G~fg~Vy~~~~~~~g~~vAiK~~~~~-----~~~~~~E~~il~~l~---h~nIv~l~~~~~~~~~~~~~~ 209 (492)
.|.+.+.||+|+||.||+|.+..+|+.||+|.+... .....+|+.+++.++ ||||+++++++. +..+
T Consensus 2 ~y~~~~~l~~g~~g~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~e~~~l~~l~~~~~~~vi~~~~~~~-----~~~~ 76 (277)
T cd06917 2 LYQRLELIGRGAYGAVYRGKHVPTGRVVALKIINLDTPDDDVSDIQREVALLSQLRQSQPPNITKYYGSYL-----KGPR 76 (277)
T ss_pred hhhhhhheeccCCceEEEEEEcCCCcEEEEEEecCCCCchhHHHHHHHHHHHHHhccCCCCCeeeEeeeee-----eCCE
Confidence 377888999999999999999999999999987532 233557999999997 999999999883 3446
Q ss_pred EEEEeeechhhHHHHhhhhhhcCCCcCHHHHHHHHHHHHHHHHHHHhhCCcccCCCCCCceEEcCCCCcEEEeeecCccc
Q 011138 210 LNLVLEYISETVYRVSKHYTRMNQHVPILYVQLYTYQICRALNYLHHVVGVCHRDIKPQNLLVNPHTHQLKICDFGSAKM 289 (492)
Q Consensus 210 ~~lV~E~~~~~l~~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~yLH~~~givHrDlKp~NILl~~~~~~vkL~DFG~a~~ 289 (492)
.|+||||+.++.+..... ...+++..+..++.||+.||.|||+ .||+||||+|+||+++.++ .++|+|||++..
T Consensus 77 ~~lv~e~~~~~~L~~~~~----~~~l~~~~~~~i~~~i~~~l~~lh~-~~i~H~dl~p~ni~i~~~~-~~~l~dfg~~~~ 150 (277)
T cd06917 77 LWIIMEYAEGGSVRTLMK----AGPIAEKYISVIIREVLVALKYIHK-VGVIHRDIKAANILVTNTG-NVKLCDFGVAAL 150 (277)
T ss_pred EEEEEecCCCCcHHHHHH----ccCCCHHHHHHHHHHHHHHHHHHHh-CCcccCCcCHHHEEEcCCC-CEEEccCCceee
Confidence 889999998754432221 2368889999999999999999997 9999999999999999877 899999999977
Q ss_pred cCCCC-CCccceeccCccCchhhcCCCCCCcchhhHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCCHHHHhhcC
Q 011138 290 LVPGE-PNISYICSRYYRAPELIFGATEYTTAIDMWSIGCVLAELLLGQPLFPGESGVDQLVEIIKILGTPTREEIKCMN 368 (492)
Q Consensus 290 ~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~~~~DvwSlGvil~ell~G~~pf~~~~~~~~~~~i~~~~g~p~~~~~~~~~ 368 (492)
..... ......|+..|+|||.+.+...++.++|+|||||++|+|++|..||.+.........+..
T Consensus 151 ~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~~l~~ll~g~~p~~~~~~~~~~~~~~~-------------- 216 (277)
T cd06917 151 LNQNSSKRSTFVGTPYWMAPEVITEGKYYDTKADIWSLGITIYEMATGNPPYSDVDAFRAMMLIPK-------------- 216 (277)
T ss_pred cCCCccccccccCCcceeCHHHhccCCccccchhHHHHHHHHHHHHhCCCCCCCCChhhhhhcccc--------------
Confidence 64433 233457899999999987666678999999999999999999999987654332221110
Q ss_pred CCCcccCCCcccCCCcccccCCCCChhHhhhhccccccCCCCcCCHHHhhCCCCCCCCC
Q 011138 369 PNYTEFKFPQIKAHPWHKIFHKRMPPEALDLVSRLLQYSPSLRCTALEACAHPFFDDLR 427 (492)
Q Consensus 369 ~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~Li~~~L~~dP~~R~t~~e~l~Hp~f~~~~ 427 (492)
...+.+ ....++.++.+++.+||+.||.+||++.+++.||||++..
T Consensus 217 -----~~~~~~--------~~~~~~~~~~~~i~~~l~~~p~~R~~~~~il~~~~~~~~~ 262 (277)
T cd06917 217 -----SKPPRL--------EDNGYSKLLREFVAACLDEEPKERLSAEELLKSKWIKAHS 262 (277)
T ss_pred -----CCCCCC--------CcccCCHHHHHHHHHHcCCCcccCcCHHHHhhChHhhccc
Confidence 000110 0112678999999999999999999999999999998754
No 251
>cd06647 STKc_PAK_I Catalytic domain of the Protein Serine/Threonine Kinase, Group I p21-activated kinase. Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, Group I, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs are implicated in the regulation of many cellular processes including growth factor receptor-mediated proliferation, cell polarity, cell motility, cell death and survival, and actin cytoskeleton organization. PAKs from higher eukaryotes are classified into two groups (I and II), according to their bi
Probab=100.00 E-value=5.5e-40 Score=323.35 Aligned_cols=254 Identities=27% Similarity=0.436 Sum_probs=201.8
Q ss_pred ccceeEeeeeccCCceEEEEEEEcCCCCEEEEEEeccc----hhhHHHHHHHHHHcCCCCccccceeeeeccCCCceEEE
Q 011138 136 TISYMAERVVGTGSFGVVFQAKCLETGDSVAIKKVLQD----KRYKNRELQIMRLLNHPNVVSLKHCFFSTTEKDELYLN 211 (492)
Q Consensus 136 ~~~y~~~~~lG~G~fg~Vy~~~~~~~g~~vAiK~~~~~----~~~~~~E~~il~~l~h~nIv~l~~~~~~~~~~~~~~~~ 211 (492)
..+|.+.+.||+|+||.||++.+..++..||+|.+... .....+|+.+++.++||||+++++++. +....|
T Consensus 18 ~~~~~~~~~lg~g~~g~v~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~e~~~l~~l~hp~i~~~~~~~~-----~~~~~~ 92 (293)
T cd06647 18 KKKYTRFEKIGQGASGTVYTAIDVATGQEVAIKQMNLQQQPKKELIINEILVMRENKHPNIVNYLDSYL-----VGDELW 92 (293)
T ss_pred hhhceeeeEecCCCCeEEEEEEEcCCCCEEEEEEeccccchHHHHHHHHHHHHhhcCCCCeeehhheee-----eCCcEE
Confidence 35799999999999999999999999999999987432 233457999999999999999999884 344588
Q ss_pred EEeeechhhHH-HHhhhhhhcCCCcCHHHHHHHHHHHHHHHHHHHhhCCcccCCCCCCceEEcCCCCcEEEeeecCcccc
Q 011138 212 LVLEYISETVY-RVSKHYTRMNQHVPILYVQLYTYQICRALNYLHHVVGVCHRDIKPQNLLVNPHTHQLKICDFGSAKML 290 (492)
Q Consensus 212 lV~E~~~~~l~-~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~yLH~~~givHrDlKp~NILl~~~~~~vkL~DFG~a~~~ 290 (492)
+|+||+.++.+ ..+. ...+++..+..++.||+.||.|||+ +|++||||||+||+++.++ .+||+|||++...
T Consensus 93 lv~e~~~~~~L~~~~~-----~~~l~~~~~~~i~~~l~~al~~LH~-~gi~H~dL~p~Nili~~~~-~~kL~dfg~~~~~ 165 (293)
T cd06647 93 VVMEYLAGGSLTDVVT-----ETCMDEGQIAAVCRECLQALEFLHS-NQVIHRDIKSDNILLGMDG-SVKLTDFGFCAQI 165 (293)
T ss_pred EEEecCCCCcHHHHHh-----hcCCCHHHHHHHHHHHHHHHHHHHh-CCEeeccCCHHHEEEcCCC-CEEEccCcceecc
Confidence 99999986543 3322 2357788899999999999999997 9999999999999999877 7999999988655
Q ss_pred CCCC-CCccceeccCccCchhhcCCCCCCcchhhHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCCHHHHhhcCC
Q 011138 291 VPGE-PNISYICSRYYRAPELIFGATEYTTAIDMWSIGCVLAELLLGQPLFPGESGVDQLVEIIKILGTPTREEIKCMNP 369 (492)
Q Consensus 291 ~~~~-~~~~~~gt~~y~aPE~~~~~~~~~~~~DvwSlGvil~ell~G~~pf~~~~~~~~~~~i~~~~g~p~~~~~~~~~~ 369 (492)
.... ......|++.|+|||.+.+. .++.++|+|||||++|+|++|..||...+....+..+.. .+.+
T Consensus 166 ~~~~~~~~~~~~~~~y~~PE~~~~~-~~~~~~Dv~slG~ll~~ll~g~~pf~~~~~~~~~~~~~~-~~~~---------- 233 (293)
T cd06647 166 TPEQSKRSTMVGTPYWMAPEVVTRK-AYGPKVDIWSLGIMAIEMVEGEPPYLNENPLRALYLIAT-NGTP---------- 233 (293)
T ss_pred cccccccccccCChhhcCchhhccC-CCCchhhHHHHHHHHHHHHhCCCCCCCCChhhheeehhc-CCCC----------
Confidence 3332 22335688999999998654 478999999999999999999999987665433322211 0000
Q ss_pred CCcccCCCcccCCCcccccCCCCChhHhhhhccccccCCCCcCCHHHhhCCCCCCCCCC
Q 011138 370 NYTEFKFPQIKAHPWHKIFHKRMPPEALDLVSRLLQYSPSLRCTALEACAHPFFDDLRD 428 (492)
Q Consensus 370 ~~~~~~~~~~~~~~~~~~~~~~~s~~~~~Li~~~L~~dP~~R~t~~e~l~Hp~f~~~~~ 428 (492)
.+ ..+..++..+++||.+||..||++||++.+++.||||+..+.
T Consensus 234 -----~~----------~~~~~~~~~l~~li~~~l~~~p~~Rp~~~~il~h~~~~~~~~ 277 (293)
T cd06647 234 -----EL----------QNPEKLSAIFRDFLNRCLEMDVEKRGSAKELLQHPFLKIAKP 277 (293)
T ss_pred -----CC----------CCccccCHHHHHHHHHHccCChhhCcCHHHHhcCHHHhcCcc
Confidence 00 012346788999999999999999999999999999997653
No 252
>cd06653 STKc_MEKK3_like_1 Catalytic domain of MAP/ERK kinase kinase 3-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3)-like subfamily, catalytic (c) domain, functionally uncharacterized subgroup 1. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The MEKK3-like subfamily is composed of MEKK3, MEKK2, and related proteins, all containing an N-terminal PB1 domain, which mediates oligomerization, and a C-terminal catalytic domain. MEKK2 and MEKK3 are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks), proteins that phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phospho
Probab=100.00 E-value=2.1e-39 Score=314.01 Aligned_cols=248 Identities=26% Similarity=0.445 Sum_probs=197.6
Q ss_pred ceeEeeeeccCCceEEEEEEEcCCCCEEEEEEeccc---------hhhHHHHHHHHHHcCCCCccccceeeeeccCCCce
Q 011138 138 SYMAERVVGTGSFGVVFQAKCLETGDSVAIKKVLQD---------KRYKNRELQIMRLLNHPNVVSLKHCFFSTTEKDEL 208 (492)
Q Consensus 138 ~y~~~~~lG~G~fg~Vy~~~~~~~g~~vAiK~~~~~---------~~~~~~E~~il~~l~h~nIv~l~~~~~~~~~~~~~ 208 (492)
+|.+.+.||+|+||.||+|.+..+|+.||+|.+... ...+.+|+.+++.++|+||+++++++... ...
T Consensus 3 ~~~~~~~lg~g~~g~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~~~ei~~l~~l~h~~i~~~~~~~~~~---~~~ 79 (264)
T cd06653 3 NWRLGKLLGRGAFGEVYLCYDADTGRELAVKQVPFDPDSQETSKEVNALECEIQLLKNLRHDRIVQYYGCLRDP---EEK 79 (264)
T ss_pred ceeeeeeEccCCCeEEEEEEEcCCCCEEEEEEEecCcccchhhHHHHHHHHHHHHHHHcCCCCcceEEEEEEcC---CCC
Confidence 599999999999999999999999999999987421 12345799999999999999999987432 234
Q ss_pred EEEEEeeechhh-HHHHhhhhhhcCCCcCHHHHHHHHHHHHHHHHHHHhhCCcccCCCCCCceEEcCCCCcEEEeeecCc
Q 011138 209 YLNLVLEYISET-VYRVSKHYTRMNQHVPILYVQLYTYQICRALNYLHHVVGVCHRDIKPQNLLVNPHTHQLKICDFGSA 287 (492)
Q Consensus 209 ~~~lV~E~~~~~-l~~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~yLH~~~givHrDlKp~NILl~~~~~~vkL~DFG~a 287 (492)
.+++||||++++ +.+.+. ....+++..++.++.||+.||.|||+ .||+|+||||+||+++.++ .++|+|||++
T Consensus 80 ~~~~v~e~~~~~~L~~~~~----~~~~l~~~~~~~~~~~i~~al~~LH~-~~i~H~dl~p~ni~i~~~~-~~~l~dfg~~ 153 (264)
T cd06653 80 KLSIFVEYMPGGSIKDQLK----AYGALTENVTRRYTRQILQGVSYLHS-NMIVHRDIKGANILRDSAG-NVKLGDFGAS 153 (264)
T ss_pred EEEEEEEeCCCCcHHHHHH----HcCCCCHHHHHHHHHHHHHHHHHHHh-CCEecCCCCHHHEEEcCCC-CEEECccccc
Confidence 578999999865 433332 23457888899999999999999997 9999999999999999877 7999999999
Q ss_pred cccCCC----CCCccceeccCccCchhhcCCCCCCcchhhHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCCHHH
Q 011138 288 KMLVPG----EPNISYICSRYYRAPELIFGATEYTTAIDMWSIGCVLAELLLGQPLFPGESGVDQLVEIIKILGTPTREE 363 (492)
Q Consensus 288 ~~~~~~----~~~~~~~gt~~y~aPE~~~~~~~~~~~~DvwSlGvil~ell~G~~pf~~~~~~~~~~~i~~~~g~p~~~~ 363 (492)
+..... .......++..|+|||.+.+. .++.++|+|||||++|+|++|+.||........+.++.. .+.
T Consensus 154 ~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~-~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~---~~~--- 226 (264)
T cd06653 154 KRIQTICMSGTGIKSVTGTPYWMSPEVISGE-GYGRKADVWSVACTVVEMLTEKPPWAEYEAMAAIFKIAT---QPT--- 226 (264)
T ss_pred cccccccccCccccccCCcccccCHhhhcCC-CCCccccHHHHHHHHHHHHhCCCCCCccCHHHHHHHHHc---CCC---
Confidence 765321 112245689999999999764 478999999999999999999999987655544433321 111
Q ss_pred HhhcCCCCcccCCCcccCCCcccccCCCCChhHhhhhccccccCCCCcCCHHHhhCCCCC
Q 011138 364 IKCMNPNYTEFKFPQIKAHPWHKIFHKRMPPEALDLVSRLLQYSPSLRCTALEACAHPFF 423 (492)
Q Consensus 364 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~Li~~~L~~dP~~R~t~~e~l~Hp~f 423 (492)
...++..+++++.++|.+||+ +|.+||++.+++.|||.
T Consensus 227 ---------------------~~~~p~~~~~~~~~~i~~~l~-~~~~r~~~~~~~~~~~~ 264 (264)
T cd06653 227 ---------------------KPMLPDGVSDACRDFLKQIFV-EEKRRPTAEFLLRHPFV 264 (264)
T ss_pred ---------------------CCCCCcccCHHHHHHHHHHhc-CcccCccHHHHhcCCCC
Confidence 011334678999999999999 57999999999999994
No 253
>cd06633 STKc_TAO3 Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 3. Serine/threonine kinases (STKs), thousand-and-one amino acids 3 (TAO3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. TAO3 is also known as JIK (JNK inhibitory kinase) or KFC (kinase from chicken). It specifically activates c-Jun N-terminal kinase (JNK), presumably by phosphorylating and activating MKK4/MKK7. In Saccharomyces cerevisiae, TAO3 is a co
Probab=100.00 E-value=2e-39 Score=322.48 Aligned_cols=249 Identities=28% Similarity=0.437 Sum_probs=202.1
Q ss_pred eeEeeeeccCCceEEEEEEEcCCCCEEEEEEeccch-------hhHHHHHHHHHHcCCCCccccceeeeeccCCCceEEE
Q 011138 139 YMAERVVGTGSFGVVFQAKCLETGDSVAIKKVLQDK-------RYKNRELQIMRLLNHPNVVSLKHCFFSTTEKDELYLN 211 (492)
Q Consensus 139 y~~~~~lG~G~fg~Vy~~~~~~~g~~vAiK~~~~~~-------~~~~~E~~il~~l~h~nIv~l~~~~~~~~~~~~~~~~ 211 (492)
|...+.||+|+||+||+|++..+|+.|+||++.... ....+|+.+++.++||||+++++++. +....|
T Consensus 23 ~~~~~~lg~g~~g~v~~~~~~~~~~~v~ik~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~-----~~~~~~ 97 (313)
T cd06633 23 FVGLHEIGHGSFGAVYFATNSHTNEVVAVKKMSYSGKQTNEKWQDIIKEVKFLQQLKHPNTIEYKGCYL-----KEHTAW 97 (313)
T ss_pred hhcceeeccCCCeEEEEEEECCCCcEEEEEEEeccccCchHHHHHHHHHHHHHHhCCCCCCccEEEEEE-----eCCEEE
Confidence 667778999999999999999999999999885321 23457999999999999999999984 344688
Q ss_pred EEeeechhhHHHHhhhhhhcCCCcCHHHHHHHHHHHHHHHHHHHhhCCcccCCCCCCceEEcCCCCcEEEeeecCccccC
Q 011138 212 LVLEYISETVYRVSKHYTRMNQHVPILYVQLYTYQICRALNYLHHVVGVCHRDIKPQNLLVNPHTHQLKICDFGSAKMLV 291 (492)
Q Consensus 212 lV~E~~~~~l~~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~yLH~~~givHrDlKp~NILl~~~~~~vkL~DFG~a~~~~ 291 (492)
+||||+.++++..+.. ....+++..+..++.||+.||.|||+ +||+||||||+||+++.++ .+||+|||++....
T Consensus 98 lv~e~~~~~l~~~l~~---~~~~l~~~~~~~~~~qi~~al~~LH~-~gi~H~dl~p~nili~~~~-~~kL~dfg~~~~~~ 172 (313)
T cd06633 98 LVMEYCLGSASDLLEV---HKKPLQEVEIAAITHGALQGLAYLHS-HNMIHRDIKAGNILLTEPG-QVKLADFGSASKSS 172 (313)
T ss_pred EEEecCCCCHHHHHHh---cCCCCCHHHHHHHHHHHHHHHHHHHH-CCeecCCCChhhEEECCCC-CEEEeecCCCcccC
Confidence 9999999877765432 23568889999999999999999997 8999999999999999887 79999999986432
Q ss_pred CCCCCccceeccCccCchhhcC--CCCCCcchhhHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCCHHHHhhcCC
Q 011138 292 PGEPNISYICSRYYRAPELIFG--ATEYTTAIDMWSIGCVLAELLLGQPLFPGESGVDQLVEIIKILGTPTREEIKCMNP 369 (492)
Q Consensus 292 ~~~~~~~~~gt~~y~aPE~~~~--~~~~~~~~DvwSlGvil~ell~G~~pf~~~~~~~~~~~i~~~~g~p~~~~~~~~~~ 369 (492)
......|+..|+|||++.. ...++.++|||||||++|+|++|.+||...+....+..+... .
T Consensus 173 ---~~~~~~~~~~y~aPE~~~~~~~~~~~~~sDv~slGvil~el~~g~~p~~~~~~~~~~~~~~~~--~----------- 236 (313)
T cd06633 173 ---PANSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNAMSALYHIAQN--D----------- 236 (313)
T ss_pred ---CCCCccccccccChhhccccCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHhc--C-----------
Confidence 2335678999999999842 344788999999999999999999999887765555544321 0
Q ss_pred CCcccCCCcccCCCcccccCCCCChhHhhhhccccccCCCCcCCHHHhhCCCCCCCCC
Q 011138 370 NYTEFKFPQIKAHPWHKIFHKRMPPEALDLVSRLLQYSPSLRCTALEACAHPFFDDLR 427 (492)
Q Consensus 370 ~~~~~~~~~~~~~~~~~~~~~~~s~~~~~Li~~~L~~dP~~R~t~~e~l~Hp~f~~~~ 427 (492)
.+.. ....++..+++||.+||+.+|.+||++.+++.||||...+
T Consensus 237 ------~~~~--------~~~~~~~~l~~li~~~l~~~P~~Rp~~~~~l~~~~~~~~~ 280 (313)
T cd06633 237 ------SPTL--------QSNEWTDSFRGFVDYCLQKIPQERPASAELLRHDFVRRDR 280 (313)
T ss_pred ------CCCC--------CccccCHHHHHHHHHHccCChhhCcCHHHHhcCcccCCCc
Confidence 0110 1123577899999999999999999999999999999643
No 254
>cd05104 PTKc_Kit Catalytic domain of the Protein Tyrosine Kinase, Kit. Protein Tyrosine Kinase (PTK) family; Kit (or c-Kit); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Kit is a member of the Platelet Derived Growth Factor Receptor (PDGFR) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of Kit to its ligand, the stem-cell factor (SCF), leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. Kit is important in the development of melanocytes, germ cells, mast cells, hematopoietic stem ce
Probab=100.00 E-value=6.2e-40 Score=334.10 Aligned_cols=250 Identities=23% Similarity=0.341 Sum_probs=191.1
Q ss_pred ccceeEeeeeccCCceEEEEEEE-----cCCCCEEEEEEeccch-----hhHHHHHHHHHHc-CCCCccccceeeeeccC
Q 011138 136 TISYMAERVVGTGSFGVVFQAKC-----LETGDSVAIKKVLQDK-----RYKNRELQIMRLL-NHPNVVSLKHCFFSTTE 204 (492)
Q Consensus 136 ~~~y~~~~~lG~G~fg~Vy~~~~-----~~~g~~vAiK~~~~~~-----~~~~~E~~il~~l-~h~nIv~l~~~~~~~~~ 204 (492)
..+|.+++.||+|+||.||+|.+ ..++..||||++.... ....+|+.+++.+ +||||+++++++
T Consensus 34 ~~~~~~~~~LG~G~fG~V~~~~~~~~~~~~~~~~vavK~l~~~~~~~~~~~~~~Ei~il~~l~~HpnIv~l~~~~----- 108 (375)
T cd05104 34 RNRLSFGKTLGAGAFGKVVEATAYGLFKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSYLGNHINIVNLLGAC----- 108 (375)
T ss_pred hHHeehhheecCCccceEEEEEEeccccCccceeEEEEeccCCcCcHHHHHHHHHHHHHHHhcCCcceeeeeeee-----
Confidence 34799999999999999999974 3467789999885422 2345799999999 899999999988
Q ss_pred CCceEEEEEeeechh-hHHHHhhhhhh-----------------------------------------------------
Q 011138 205 KDELYLNLVLEYISE-TVYRVSKHYTR----------------------------------------------------- 230 (492)
Q Consensus 205 ~~~~~~~lV~E~~~~-~l~~~~~~~~~----------------------------------------------------- 230 (492)
.+....++|||||++ +|.+.+.....
T Consensus 109 ~~~~~~~lv~E~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~ 188 (375)
T cd05104 109 TVGGPTLVITEYCCYGDLLNFLRRKRDSFICPKHEDHAEAALYKNLLHQREMSCDSLNEYMDMKPGVSYVVPTKADKRRS 188 (375)
T ss_pred ccCCcceeeehhccCCcHHHHHHhcccccccccccchhhhHHHHhhhhhhcccchhhhhhhhcCCCcccccccccccccc
Confidence 444458899999985 45444432110
Q ss_pred ------------------cCCCcCHHHHHHHHHHHHHHHHHHHhhCCcccCCCCCCceEEcCCCCcEEEeeecCccccCC
Q 011138 231 ------------------MNQHVPILYVQLYTYQICRALNYLHHVVGVCHRDIKPQNLLVNPHTHQLKICDFGSAKMLVP 292 (492)
Q Consensus 231 ------------------~~~~~~~~~~~~i~~qi~~aL~yLH~~~givHrDlKp~NILl~~~~~~vkL~DFG~a~~~~~ 292 (492)
....+++..+..++.||+.||.|||+ +||+||||||+|||++.++ .+||+|||+++....
T Consensus 189 ~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~~l~~lH~-~~ivH~Dlkp~Nill~~~~-~~kl~DfG~a~~~~~ 266 (375)
T cd05104 189 VRSGSYIDQDVTSEILEEDELALDTEDLLSFSYQVAKGMSFLAS-KNCIHRDLAARNILLTHGR-ITKICDFGLARDIRN 266 (375)
T ss_pred cccceecccccHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHH-CCeeccCCchhhEEEECCC-cEEEecCccceeccC
Confidence 01246778889999999999999997 9999999999999999776 799999999976543
Q ss_pred CCCC---ccceeccCccCchhhcCCCCCCcchhhHHHHHHHHHHHh-CCCCCCCCChHHHHHHHHHHhCCCCHHHHhhcC
Q 011138 293 GEPN---ISYICSRYYRAPELIFGATEYTTAIDMWSIGCVLAELLL-GQPLFPGESGVDQLVEIIKILGTPTREEIKCMN 368 (492)
Q Consensus 293 ~~~~---~~~~gt~~y~aPE~~~~~~~~~~~~DvwSlGvil~ell~-G~~pf~~~~~~~~~~~i~~~~g~p~~~~~~~~~ 368 (492)
.... ....++..|+|||++.+. .++.++|||||||++|||++ |..||........+.+.+...
T Consensus 267 ~~~~~~~~~~~~~~~y~aPE~~~~~-~~~~~sDi~slG~~l~ellt~g~~p~~~~~~~~~~~~~~~~~------------ 333 (375)
T cd05104 267 DSNYVVKGNARLPVKWMAPESIFNC-VYTFESDVWSYGILLWEIFSLGSSPYPGMPVDSKFYKMIKEG------------ 333 (375)
T ss_pred cccccccCCCCCCcceeChhHhcCC-CCCCCCCHHHHHHHHHHHHhcCCCCCCCCCchHHHHHHHHhC------------
Confidence 2211 123345679999999654 48999999999999999997 899998765544444433210
Q ss_pred CCCcccCCCcccCCCcccccCCCCChhHhhhhccccccCCCCcCCHHHhhCC
Q 011138 369 PNYTEFKFPQIKAHPWHKIFHKRMPPEALDLVSRLLQYSPSLRCTALEACAH 420 (492)
Q Consensus 369 ~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~Li~~~L~~dP~~R~t~~e~l~H 420 (492)
... ..+...+.++++||.+||+.||++||++.++++.
T Consensus 334 -----~~~----------~~~~~~~~~l~~li~~cl~~dP~~RPs~~eil~~ 370 (375)
T cd05104 334 -----YRM----------LSPECAPSEMYDIMKSCWDADPLKRPTFKQIVQL 370 (375)
T ss_pred -----ccC----------CCCCCCCHHHHHHHHHHccCChhHCcCHHHHHHH
Confidence 000 0112357899999999999999999999999863
No 255
>cd06640 STKc_MST4 Catalytic domain of the Protein Serine/Threonine Kinase, Mammalian Ste20-like protein kinase 4. Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 4 (MST4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MST4 is sometimes referred to as MASK (MST3 and SOK1-related kinase). It plays a role in mitogen-activated protein kinase (MAPK) signaling during cytoskeletal rearrangement, morphogenesis, and apoptosis. It influences cell growth and transformation by modulating the extracellular signal-regulated kinase (ERK) pathway. MST4 may also play a role in tumor formation and progression. It localizes in the Golgi apparatus by inter
Probab=100.00 E-value=5.5e-40 Score=320.42 Aligned_cols=249 Identities=25% Similarity=0.379 Sum_probs=200.3
Q ss_pred ceeEeeeeccCCceEEEEEEEcCCCCEEEEEEeccch-----hhHHHHHHHHHHcCCCCccccceeeeeccCCCceEEEE
Q 011138 138 SYMAERVVGTGSFGVVFQAKCLETGDSVAIKKVLQDK-----RYKNRELQIMRLLNHPNVVSLKHCFFSTTEKDELYLNL 212 (492)
Q Consensus 138 ~y~~~~~lG~G~fg~Vy~~~~~~~g~~vAiK~~~~~~-----~~~~~E~~il~~l~h~nIv~l~~~~~~~~~~~~~~~~l 212 (492)
.|...+.||.|+||.||+|.+..++..||||.+.... ....+|+.+++.++|+||+++++++ .+..+.|+
T Consensus 5 ~y~~~~~lg~g~~~~vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~-----~~~~~~~l 79 (277)
T cd06640 5 LFTKLERIGKGSFGEVFKGIDNRTQQVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYVTKYYGSY-----LKGTKLWI 79 (277)
T ss_pred hhhhhhhcccCCCeEEEEEEEccCCEEEEEEEEeccccHHHHHHHHHHHHHHHhCCCCCEeeEEEEE-----EECCEEEE
Confidence 4778889999999999999999999999999875332 2345799999999999999999998 34456899
Q ss_pred EeeechhhHH-HHhhhhhhcCCCcCHHHHHHHHHHHHHHHHHHHhhCCcccCCCCCCceEEcCCCCcEEEeeecCccccC
Q 011138 213 VLEYISETVY-RVSKHYTRMNQHVPILYVQLYTYQICRALNYLHHVVGVCHRDIKPQNLLVNPHTHQLKICDFGSAKMLV 291 (492)
Q Consensus 213 V~E~~~~~l~-~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~yLH~~~givHrDlKp~NILl~~~~~~vkL~DFG~a~~~~ 291 (492)
||||++++.+ +.+. ...+++..+..++.|++.||.|||+ .|++|+||+|+||+++.++ .++|+|||++....
T Consensus 80 v~e~~~~~~L~~~i~-----~~~l~~~~~~~~~~~l~~~l~~lh~-~~ivH~dl~p~Nil~~~~~-~~~l~dfg~~~~~~ 152 (277)
T cd06640 80 IMEYLGGGSALDLLR-----AGPFDEFQIATMLKEILKGLDYLHS-EKKIHRDIKAANVLLSEQG-DVKLADFGVAGQLT 152 (277)
T ss_pred EEecCCCCcHHHHHh-----cCCCCHHHHHHHHHHHHHHHHHHHh-CCccCcCCChhhEEEcCCC-CEEEcccccceecc
Confidence 9999987543 3322 2457888899999999999999997 9999999999999999877 79999999997654
Q ss_pred CCCC-CccceeccCccCchhhcCCCCCCcchhhHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCCHHHHhhcCCC
Q 011138 292 PGEP-NISYICSRYYRAPELIFGATEYTTAIDMWSIGCVLAELLLGQPLFPGESGVDQLVEIIKILGTPTREEIKCMNPN 370 (492)
Q Consensus 292 ~~~~-~~~~~gt~~y~aPE~~~~~~~~~~~~DvwSlGvil~ell~G~~pf~~~~~~~~~~~i~~~~g~p~~~~~~~~~~~ 370 (492)
.... .....++..|+|||++.+. .++.++|+|||||++|+|++|..||...........+.. +
T Consensus 153 ~~~~~~~~~~~~~~y~apE~~~~~-~~~~~~Dv~slG~il~el~tg~~p~~~~~~~~~~~~~~~--~------------- 216 (277)
T cd06640 153 DTQIKRNTFVGTPFWMAPEVIQQS-AYDSKADIWSLGITAIELAKGEPPNSDMHPMRVLFLIPK--N------------- 216 (277)
T ss_pred CCccccccccCcccccCHhHhccC-CCccHHHHHHHHHHHHHHHHCCCCCCCcChHhHhhhhhc--C-------------
Confidence 3332 2234678899999998654 478999999999999999999999987654433322211 0
Q ss_pred CcccCCCcccCCCcccccCCCCChhHhhhhccccccCCCCcCCHHHhhCCCCCCCCC
Q 011138 371 YTEFKFPQIKAHPWHKIFHKRMPPEALDLVSRLLQYSPSLRCTALEACAHPFFDDLR 427 (492)
Q Consensus 371 ~~~~~~~~~~~~~~~~~~~~~~s~~~~~Li~~~L~~dP~~R~t~~e~l~Hp~f~~~~ 427 (492)
..+ .+...++.++.+||.+||..||++||++.++++||||....
T Consensus 217 ----~~~---------~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~il~~~~~~~~~ 260 (277)
T cd06640 217 ----NPP---------TLTGEFSKPFKEFIDACLNKDPSFRPTAKELLKHKFIVKNA 260 (277)
T ss_pred ----CCC---------CCchhhhHHHHHHHHHHcccCcccCcCHHHHHhChHhhhcc
Confidence 000 12234678899999999999999999999999999998654
No 256
>PHA03390 pk1 serine/threonine-protein kinase 1; Provisional
Probab=100.00 E-value=9.9e-40 Score=317.15 Aligned_cols=247 Identities=26% Similarity=0.373 Sum_probs=189.8
Q ss_pred ceeEeeee--ccCCceEEEEEEEcCCCCEEEEEEeccchhhHHHHHHHHHHc-CCCCccccceeeeeccCCCceEEEEEe
Q 011138 138 SYMAERVV--GTGSFGVVFQAKCLETGDSVAIKKVLQDKRYKNRELQIMRLL-NHPNVVSLKHCFFSTTEKDELYLNLVL 214 (492)
Q Consensus 138 ~y~~~~~l--G~G~fg~Vy~~~~~~~g~~vAiK~~~~~~~~~~~E~~il~~l-~h~nIv~l~~~~~~~~~~~~~~~~lV~ 214 (492)
.|.+.+.+ |+|+||.||++.++.++..+|+|.+...... ..|+.+...+ +||||++++++|. ....+|+||
T Consensus 15 ~~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~k~~~~~~~~-~~e~~~~~~~~~h~~iv~~~~~~~-----~~~~~~iv~ 88 (267)
T PHA03390 15 NCEIVKKLKLIDGKFGKVSVLKHKPTQKLFVQKIIKAKNFN-AIEPMVHQLMKDNPNFIKLYYSVT-----TLKGHVLIM 88 (267)
T ss_pred hhccccceeecCCCceEEEEEEEcCCCcEEEEEEEehhhcc-hhhHHHHHHhhcCCCEEEEEEEEe-----cCCeeEEEE
Confidence 35555555 9999999999999999999999988543211 1234333333 6999999999984 344689999
Q ss_pred eechh-hHHHHhhhhhhcCCCcCHHHHHHHHHHHHHHHHHHHhhCCcccCCCCCCceEEcCCCCcEEEeeecCccccCCC
Q 011138 215 EYISE-TVYRVSKHYTRMNQHVPILYVQLYTYQICRALNYLHHVVGVCHRDIKPQNLLVNPHTHQLKICDFGSAKMLVPG 293 (492)
Q Consensus 215 E~~~~-~l~~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~yLH~~~givHrDlKp~NILl~~~~~~vkL~DFG~a~~~~~~ 293 (492)
||+++ +|...+.. ...+++..++.++.||+.||.|||+ .||+||||||+||+++.++..++|+|||++.....
T Consensus 89 e~~~~~~L~~~l~~----~~~l~~~~~~~~~~qi~~~l~~lH~-~~i~H~dl~p~nil~~~~~~~~~l~dfg~~~~~~~- 162 (267)
T PHA03390 89 DYIKDGDLFDLLKK----EGKLSEAEVKKIIRQLVEALNDLHK-HNIIHNDIKLENVLYDRAKDRIYLCDYGLCKIIGT- 162 (267)
T ss_pred EcCCCCcHHHHHHh----cCCCCHHHHHHHHHHHHHHHHHHHh-CCeeeCCCCHHHEEEeCCCCeEEEecCccceecCC-
Confidence 99985 45444332 3478999999999999999999997 89999999999999998775799999999876532
Q ss_pred CCCccceeccCccCchhhcCCCCCCcchhhHHHHHHHHHHHhCCCCCCCCChHHH-HHHHHHHhCCCCHHHHhhcCCCCc
Q 011138 294 EPNISYICSRYYRAPELIFGATEYTTAIDMWSIGCVLAELLLGQPLFPGESGVDQ-LVEIIKILGTPTREEIKCMNPNYT 372 (492)
Q Consensus 294 ~~~~~~~gt~~y~aPE~~~~~~~~~~~~DvwSlGvil~ell~G~~pf~~~~~~~~-~~~i~~~~g~p~~~~~~~~~~~~~ 372 (492)
.....++..|+|||++.+. .++.++|||||||++|+|++|..||........ ...+..... .
T Consensus 163 --~~~~~~~~~y~aPE~~~~~-~~~~~~DvwslG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~--------------~ 225 (267)
T PHA03390 163 --PSCYDGTLDYFSPEKIKGH-NYDVSFDWWAVGVLTYELLTGKHPFKEDEDEELDLESLLKRQQ--------------K 225 (267)
T ss_pred --CccCCCCCcccChhhhcCC-CCCchhhHHHHHHHHHHHHHCCCCCCCCCcchhhHHHHHHhhc--------------c
Confidence 2245689999999999654 489999999999999999999999986543321 111111100 0
Q ss_pred ccCCCcccCCCcccccCCCCChhHhhhhccccccCCCCcCC-HHHhhCCCCCCC
Q 011138 373 EFKFPQIKAHPWHKIFHKRMPPEALDLVSRLLQYSPSLRCT-ALEACAHPFFDD 425 (492)
Q Consensus 373 ~~~~~~~~~~~~~~~~~~~~s~~~~~Li~~~L~~dP~~R~t-~~e~l~Hp~f~~ 425 (492)
. ....+.+++.+.+||.+||+.||.+|++ .+++|+||||+.
T Consensus 226 ~------------~~~~~~~~~~~~~li~~~l~~~p~~R~~~~~~~l~h~~~~~ 267 (267)
T PHA03390 226 K------------LPFIKNVSKNANDFVQSMLKYNINYRLTNYNEIIKHPFLKI 267 (267)
T ss_pred c------------CCcccccCHHHHHHHHHHhccChhhCCchHHHHhcCCcccC
Confidence 0 0112357899999999999999999996 599999999973
No 257
>cd06648 STKc_PAK_II Catalytic domain of the Protein Serine/Threonine Kinase, Group II p21-activated kinase. Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, Group II, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. Group II PAKs, also called non-conventional PAKs, include PAK4, PAK5, and PAK6. Group II PAKs contain PBD (p21-binding domain) and catalytic domains, but lack other motifs foun
Probab=100.00 E-value=2e-39 Score=317.98 Aligned_cols=253 Identities=28% Similarity=0.463 Sum_probs=200.6
Q ss_pred eeEeeeeccCCceEEEEEEEcCCCCEEEEEEeccc----hhhHHHHHHHHHHcCCCCccccceeeeeccCCCceEEEEEe
Q 011138 139 YMAERVVGTGSFGVVFQAKCLETGDSVAIKKVLQD----KRYKNRELQIMRLLNHPNVVSLKHCFFSTTEKDELYLNLVL 214 (492)
Q Consensus 139 y~~~~~lG~G~fg~Vy~~~~~~~g~~vAiK~~~~~----~~~~~~E~~il~~l~h~nIv~l~~~~~~~~~~~~~~~~lV~ 214 (492)
|...+.||+|+||.||++.+..+++.+++|++... .....+|+.+++.++||||+++++++. ...+.++|+
T Consensus 21 ~~~~~~lg~g~~g~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~e~~~l~~~~h~~vv~~~~~~~-----~~~~~~~v~ 95 (285)
T cd06648 21 LDNFVKIGEGSTGIVCIATDKSTGRQVAVKKMDLRKQQRRELLFNEVVIMRDYQHPNIVEMYSSYL-----VGDELWVVM 95 (285)
T ss_pred hhcceEeccCCCeEEEEEEECCCCCEEEEEEEeccchhHHHHHHHHHHHHHHcCCCChheEEEEEE-----cCCeEEEEE
Confidence 44456899999999999999999999999987432 223457999999999999999999884 344588999
Q ss_pred eechhhHHHHhhhhhhcCCCcCHHHHHHHHHHHHHHHHHHHhhCCcccCCCCCCceEEcCCCCcEEEeeecCccccCCCC
Q 011138 215 EYISETVYRVSKHYTRMNQHVPILYVQLYTYQICRALNYLHHVVGVCHRDIKPQNLLVNPHTHQLKICDFGSAKMLVPGE 294 (492)
Q Consensus 215 E~~~~~l~~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~yLH~~~givHrDlKp~NILl~~~~~~vkL~DFG~a~~~~~~~ 294 (492)
||+.++.+..... ...++...+..++.||+.||.|||+ +||+||||||+||+++.++ .++|+|||.+.......
T Consensus 96 e~~~~~~L~~~~~----~~~~~~~~~~~~~~ql~~~l~~lH~-~~i~H~dl~p~Nil~~~~~-~~~l~d~g~~~~~~~~~ 169 (285)
T cd06648 96 EFLEGGALTDIVT----HTRMNEEQIATVCLAVLKALSFLHA-QGVIHRDIKSDSILLTSDG-RVKLSDFGFCAQVSKEV 169 (285)
T ss_pred eccCCCCHHHHHH----hCCCCHHHHHHHHHHHHHHHHHHHh-CCeecCCCChhhEEEcCCC-cEEEcccccchhhccCC
Confidence 9998654432211 1457888899999999999999997 9999999999999999887 89999999887553322
Q ss_pred C-CccceeccCccCchhhcCCCCCCcchhhHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCCHHHHhhcCCCCcc
Q 011138 295 P-NISYICSRYYRAPELIFGATEYTTAIDMWSIGCVLAELLLGQPLFPGESGVDQLVEIIKILGTPTREEIKCMNPNYTE 373 (492)
Q Consensus 295 ~-~~~~~gt~~y~aPE~~~~~~~~~~~~DvwSlGvil~ell~G~~pf~~~~~~~~~~~i~~~~g~p~~~~~~~~~~~~~~ 373 (492)
. .....|++.|+|||.+.+. .++.++|||||||++|+|++|..||...+....+..+... .+
T Consensus 170 ~~~~~~~~~~~y~aPE~~~~~-~~~~~~Dv~slGv~l~ell~g~~p~~~~~~~~~~~~~~~~--~~-------------- 232 (285)
T cd06648 170 PRRKSLVGTPYWMAPEVISRL-PYGTEVDIWSLGIMVIEMVDGEPPYFNEPPLQAMKRIRDN--LP-------------- 232 (285)
T ss_pred cccccccCCccccCHHHhcCC-CCCCcccHHHHHHHHHHHHhCCCCCcCCCHHHHHHHHHhc--CC--------------
Confidence 2 2335689999999998654 4899999999999999999999999877655544443321 00
Q ss_pred cCCCcccCCCcccccCCCCChhHhhhhccccccCCCCcCCHHHhhCCCCCCCCCCC
Q 011138 374 FKFPQIKAHPWHKIFHKRMPPEALDLVSRLLQYSPSLRCTALEACAHPFFDDLRDP 429 (492)
Q Consensus 374 ~~~~~~~~~~~~~~~~~~~s~~~~~Li~~~L~~dP~~R~t~~e~l~Hp~f~~~~~~ 429 (492)
+... ....++..+.+||.+||+.||++||++.++++||||+..+++
T Consensus 233 ---~~~~-------~~~~~~~~l~~li~~~l~~~p~~Rpt~~~il~~~~~~~~~~~ 278 (285)
T cd06648 233 ---PKLK-------NLHKVSPRLRSFLDRMLVRDPAQRATAAELLNHPFLAKAGPP 278 (285)
T ss_pred ---CCCc-------ccccCCHHHHHHHHHHcccChhhCcCHHHHccCcccccCCCc
Confidence 0000 112367899999999999999999999999999999987754
No 258
>cd06623 PKc_MAPKK_plant_like Catalytic domain of Plant dual-specificity MAP kinase kinases and similar proteins. Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, Plant MAPKKs and similar proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of
Probab=100.00 E-value=2.1e-39 Score=313.04 Aligned_cols=251 Identities=33% Similarity=0.500 Sum_probs=202.7
Q ss_pred ceeEeeeeccCCceEEEEEEEcCCCCEEEEEEeccc-----hhhHHHHHHHHHHcCCCCccccceeeeeccCCCceEEEE
Q 011138 138 SYMAERVVGTGSFGVVFQAKCLETGDSVAIKKVLQD-----KRYKNRELQIMRLLNHPNVVSLKHCFFSTTEKDELYLNL 212 (492)
Q Consensus 138 ~y~~~~~lG~G~fg~Vy~~~~~~~g~~vAiK~~~~~-----~~~~~~E~~il~~l~h~nIv~l~~~~~~~~~~~~~~~~l 212 (492)
+|.+.+.||.|+||.||+|.+..+|+.|+||++... .....+|+.++..++|+||+++++++ .....+++
T Consensus 2 ~~~~~~~i~~g~~~~v~~~~~~~~~~~~~vk~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~-----~~~~~~~l 76 (264)
T cd06623 2 DLERVKVLGQGSSGVVYKVRHKPTGKIYALKKIHVDGDEEFRKQLLRELKTLRSCESPYVVKCYGAF-----YKEGEISI 76 (264)
T ss_pred cceeeeeeeecCCeEEEEEEEcCCCcEEEEEEeccCcchHHHHHHHHHHHHHHhcCCCCeeeEEEEE-----ccCCeEEE
Confidence 588999999999999999999999999999988654 23456899999999999999999988 34456899
Q ss_pred Eeeechhh-HHHHhhhhhhcCCCcCHHHHHHHHHHHHHHHHHHHhhCCcccCCCCCCceEEcCCCCcEEEeeecCccccC
Q 011138 213 VLEYISET-VYRVSKHYTRMNQHVPILYVQLYTYQICRALNYLHHVVGVCHRDIKPQNLLVNPHTHQLKICDFGSAKMLV 291 (492)
Q Consensus 213 V~E~~~~~-l~~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~yLH~~~givHrDlKp~NILl~~~~~~vkL~DFG~a~~~~ 291 (492)
||||++++ +...+.. ...+++..+..++.||+.||.|||+..|++||||+|+||+++.++ .++|+|||++....
T Consensus 77 v~e~~~~~~L~~~l~~----~~~l~~~~~~~~~~~l~~~l~~lh~~~~~~H~~l~~~ni~~~~~~-~~~l~df~~~~~~~ 151 (264)
T cd06623 77 VLEYMDGGSLADLLKK----VGKIPEPVLAYIARQILKGLDYLHTKRHIIHRDIKPSNLLINSKG-EVKIADFGISKVLE 151 (264)
T ss_pred EEEecCCCcHHHHHHH----cCCCCHHHHHHHHHHHHHHHHHHhccCCCccCCCCHHHEEECCCC-CEEEccCccceecc
Confidence 99999954 4444332 266899999999999999999999427999999999999999887 89999999998764
Q ss_pred CCCCCc-cceeccCccCchhhcCCCCCCcchhhHHHHHHHHHHHhCCCCCCCCC--hHHH-HHHHHHHhCCCCHHHHhhc
Q 011138 292 PGEPNI-SYICSRYYRAPELIFGATEYTTAIDMWSIGCVLAELLLGQPLFPGES--GVDQ-LVEIIKILGTPTREEIKCM 367 (492)
Q Consensus 292 ~~~~~~-~~~gt~~y~aPE~~~~~~~~~~~~DvwSlGvil~ell~G~~pf~~~~--~~~~-~~~i~~~~g~p~~~~~~~~ 367 (492)
...... ...++..|+|||.+.+. .++.++|+||||+++|+|++|..||.... .... ...+.. ..
T Consensus 152 ~~~~~~~~~~~~~~y~~pE~~~~~-~~~~~~Dv~slG~il~~l~tg~~p~~~~~~~~~~~~~~~~~~---~~-------- 219 (264)
T cd06623 152 NTLDQCNTFVGTVTYMSPERIQGE-SYSYAADIWSLGLTLLECALGKFPFLPPGQPSFFELMQAICD---GP-------- 219 (264)
T ss_pred cCCCcccceeecccccCHhhhCCC-CCCchhhHHHHHHHHHHHHhCCCCCccccccCHHHHHHHHhc---CC--------
Confidence 433332 56788999999998654 58999999999999999999999997764 2222 211111 00
Q ss_pred CCCCcccCCCcccCCCcccccCCC-CChhHhhhhccccccCCCCcCCHHHhhCCCCCCCCC
Q 011138 368 NPNYTEFKFPQIKAHPWHKIFHKR-MPPEALDLVSRLLQYSPSLRCTALEACAHPFFDDLR 427 (492)
Q Consensus 368 ~~~~~~~~~~~~~~~~~~~~~~~~-~s~~~~~Li~~~L~~dP~~R~t~~e~l~Hp~f~~~~ 427 (492)
.+. +... ++..+.++|.+||..+|++||++.++++||||+...
T Consensus 220 --------~~~---------~~~~~~~~~l~~li~~~l~~~p~~R~~~~~ll~~~~~~~~~ 263 (264)
T cd06623 220 --------PPS---------LPAEEFSPEFRDFISACLQKDPKKRPSAAELLQHPFIKKAD 263 (264)
T ss_pred --------CCC---------CCcccCCHHHHHHHHHHccCChhhCCCHHHHHhCHHHHhcc
Confidence 000 1123 688999999999999999999999999999998753
No 259
>cd08219 STKc_Nek3 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 3. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 3 (Nek3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek3 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek3 is primarily localized in the cytoplasm and shows no cell cycle-dependent changes in its activity. It is present in the axons of neurons and affects morphogenesis and polarity through its regulation of microtubule acetylation. Nek3 modulates the signaling of the prolactin receptor through its activati
Probab=100.00 E-value=1.4e-39 Score=313.33 Aligned_cols=245 Identities=25% Similarity=0.452 Sum_probs=197.3
Q ss_pred ceeEeeeeccCCceEEEEEEEcCCCCEEEEEEeccc-----hhhHHHHHHHHHHcCCCCccccceeeeeccCCCceEEEE
Q 011138 138 SYMAERVVGTGSFGVVFQAKCLETGDSVAIKKVLQD-----KRYKNRELQIMRLLNHPNVVSLKHCFFSTTEKDELYLNL 212 (492)
Q Consensus 138 ~y~~~~~lG~G~fg~Vy~~~~~~~g~~vAiK~~~~~-----~~~~~~E~~il~~l~h~nIv~l~~~~~~~~~~~~~~~~l 212 (492)
+|.+.+.||.|+||.||++.+..+++.||+|.+... .....+|+.+++.++|+||+++++++ .+..++|+
T Consensus 1 ~y~~~~~lg~g~~g~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~-----~~~~~~~l 75 (255)
T cd08219 1 QYNVLRVVGEGSFGRALLVQHVNSDQKYAMKEIRLPKSSSAVEDSRKEAVLLAKMKHPNIVAFKESF-----EADGHLYI 75 (255)
T ss_pred CceEEEEeeccCCeEEEEEEEcCCCceEEEEEEEcCcchHHHHHHHHHHHHHHhCCCCCcceEEEEE-----EECCEEEE
Confidence 488999999999999999999999999999987432 23345799999999999999999988 44457899
Q ss_pred Eeeechhh-HHHHhhhhhhcCCCcCHHHHHHHHHHHHHHHHHHHhhCCcccCCCCCCceEEcCCCCcEEEeeecCccccC
Q 011138 213 VLEYISET-VYRVSKHYTRMNQHVPILYVQLYTYQICRALNYLHHVVGVCHRDIKPQNLLVNPHTHQLKICDFGSAKMLV 291 (492)
Q Consensus 213 V~E~~~~~-l~~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~yLH~~~givHrDlKp~NILl~~~~~~vkL~DFG~a~~~~ 291 (492)
||||++++ +...+.. .....+++..+..++.||+.||.|||+ +||+|+||||+||+++.++ .++|+|||++....
T Consensus 76 v~e~~~~~~l~~~~~~--~~~~~~~~~~~~~~~~~i~~al~~lH~-~~i~H~dl~p~nili~~~~-~~~l~dfg~~~~~~ 151 (255)
T cd08219 76 VMEYCDGGDLMQKIKL--QRGKLFPEDTILQWFVQMCLGVQHIHE-KRVLHRDIKSKNIFLTQNG-KVKLGDFGSARLLT 151 (255)
T ss_pred EEeeCCCCcHHHHHHh--ccCCCCCHHHHHHHHHHHHHHHHHHhh-CCcccCCCCcceEEECCCC-cEEEcccCcceeec
Confidence 99999864 4443322 123457889999999999999999997 9999999999999999877 79999999987653
Q ss_pred CCC-CCccceeccCccCchhhcCCCCCCcchhhHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCCHHHHhhcCCC
Q 011138 292 PGE-PNISYICSRYYRAPELIFGATEYTTAIDMWSIGCVLAELLLGQPLFPGESGVDQLVEIIKILGTPTREEIKCMNPN 370 (492)
Q Consensus 292 ~~~-~~~~~~gt~~y~aPE~~~~~~~~~~~~DvwSlGvil~ell~G~~pf~~~~~~~~~~~i~~~~g~p~~~~~~~~~~~ 370 (492)
... ......|++.|+|||++.+. .++.++|+|||||++|+|++|..||...+.......+... .
T Consensus 152 ~~~~~~~~~~~~~~~~aPE~~~~~-~~~~~~Dv~slG~i~~~l~~g~~p~~~~~~~~~~~~~~~~--~------------ 216 (255)
T cd08219 152 SPGAYACTYVGTPYYVPPEIWENM-PYNNKSDIWSLGCILYELCTLKHPFQANSWKNLILKVCQG--S------------ 216 (255)
T ss_pred ccccccccccCCccccCHHHHccC-CcCchhhhhhhchhheehhhccCCCCCCCHHHHHHHHhcC--C------------
Confidence 322 22346789999999998654 4899999999999999999999999877655444443221 0
Q ss_pred CcccCCCcccCCCcccccCCCCChhHhhhhccccccCCCCcCCHHHhhCC
Q 011138 371 YTEFKFPQIKAHPWHKIFHKRMPPEALDLVSRLLQYSPSLRCTALEACAH 420 (492)
Q Consensus 371 ~~~~~~~~~~~~~~~~~~~~~~s~~~~~Li~~~L~~dP~~R~t~~e~l~H 420 (492)
++ .++..++.++.+||.+||+.||.+||++.+++.-
T Consensus 217 -----~~---------~~~~~~~~~~~~li~~~l~~~P~~Rp~~~~il~~ 252 (255)
T cd08219 217 -----YK---------PLPSHYSYELRSLIKQMFKRNPRSRPSATTILSR 252 (255)
T ss_pred -----CC---------CCCcccCHHHHHHHHHHHhCCcccCCCHHHHhhc
Confidence 00 0123467889999999999999999999999863
No 260
>cd08215 STKc_Nek Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase (Nek) family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The Nek family is composed of 11 different mammalian members (Nek1-11) with similarity to the catalytic domain of Aspergillus nidulans NIMA kinase, the founding member of the Nek family which was identified in a screen for cell cycle mutants that were prevented from entering mitosis. Neks contain a conserved N-terminal catalytic domain and a more divergent C-terminal regulatory region of various sizes and structures. They
Probab=100.00 E-value=2.6e-39 Score=310.81 Aligned_cols=250 Identities=30% Similarity=0.506 Sum_probs=203.1
Q ss_pred ceeEeeeeccCCceEEEEEEEcCCCCEEEEEEeccc------hhhHHHHHHHHHHcCCCCccccceeeeeccCCCceEEE
Q 011138 138 SYMAERVVGTGSFGVVFQAKCLETGDSVAIKKVLQD------KRYKNRELQIMRLLNHPNVVSLKHCFFSTTEKDELYLN 211 (492)
Q Consensus 138 ~y~~~~~lG~G~fg~Vy~~~~~~~g~~vAiK~~~~~------~~~~~~E~~il~~l~h~nIv~l~~~~~~~~~~~~~~~~ 211 (492)
+|.+.+.||.|+||.||++.+..++..|++|++... .....+|+++++.++|+|++++++.+. +..+.+
T Consensus 1 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~~~~~~~~~-----~~~~~~ 75 (258)
T cd08215 1 KYEIIKQIGKGSFGKVYLVRRKSDGKLYVLKEIDLSNMSEKEREDALNEVKILKKLNHPNIIKYYESFE-----EKGKLC 75 (258)
T ss_pred CceEEeeeccCCCeEEEEEEEcCCCcEEEEEEeecccCChHHHHHHHHHHHHHHhcCCCChhheEEEEe-----cCCEEE
Confidence 488999999999999999999999999999988543 233557999999999999999999884 335688
Q ss_pred EEeeechh-hHHHHhhhhhhcCCCcCHHHHHHHHHHHHHHHHHHHhhCCcccCCCCCCceEEcCCCCcEEEeeecCcccc
Q 011138 212 LVLEYISE-TVYRVSKHYTRMNQHVPILYVQLYTYQICRALNYLHHVVGVCHRDIKPQNLLVNPHTHQLKICDFGSAKML 290 (492)
Q Consensus 212 lV~E~~~~-~l~~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~yLH~~~givHrDlKp~NILl~~~~~~vkL~DFG~a~~~ 290 (492)
+|+||+++ .+...+.........+++..+..++.||+.||.|||+ .|++|+||+|+||+++.++ .++|+|||.+...
T Consensus 76 lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~~i~~~l~~lh~-~~~~H~dl~~~nil~~~~~-~~~l~d~~~~~~~ 153 (258)
T cd08215 76 IVMEYADGGDLSQKIKKQKKEGKPFPEEQILDWFVQLCLALKYLHS-RKILHRDIKPQNIFLTSNG-LVKLGDFGISKVL 153 (258)
T ss_pred EEEEecCCCcHHHHHHHhhccCCCcCHHHHHHHHHHHHHHHHHHHh-CCEecccCChHHeEEcCCC-cEEECCccceeec
Confidence 99999986 4555444333234678999999999999999999997 8999999999999999877 7999999999765
Q ss_pred CCCC-CCccceeccCccCchhhcCCCCCCcchhhHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCCHHHHhhcCC
Q 011138 291 VPGE-PNISYICSRYYRAPELIFGATEYTTAIDMWSIGCVLAELLLGQPLFPGESGVDQLVEIIKILGTPTREEIKCMNP 369 (492)
Q Consensus 291 ~~~~-~~~~~~gt~~y~aPE~~~~~~~~~~~~DvwSlGvil~ell~G~~pf~~~~~~~~~~~i~~~~g~p~~~~~~~~~~ 369 (492)
.... ......|++.|+|||.+.+.. ++.++|+||+|+++|+|++|..||...+..+....+...
T Consensus 154 ~~~~~~~~~~~~~~~y~~pe~~~~~~-~~~~~Dv~slG~~~~~l~~g~~p~~~~~~~~~~~~~~~~-------------- 218 (258)
T cd08215 154 SSTVDLAKTVVGTPYYLSPELCQNKP-YNYKSDIWSLGCVLYELCTLKHPFEGENLLELALKILKG-------------- 218 (258)
T ss_pred ccCcceecceeeeecccChhHhccCC-CCccccHHHHHHHHHHHHcCCCCCCCCcHHHHHHHHhcC--------------
Confidence 4332 233457899999999986544 889999999999999999999999877644433333221
Q ss_pred CCcccCCCcccCCCcccccCCCCChhHhhhhccccccCCCCcCCHHHhhCCCCC
Q 011138 370 NYTEFKFPQIKAHPWHKIFHKRMPPEALDLVSRLLQYSPSLRCTALEACAHPFF 423 (492)
Q Consensus 370 ~~~~~~~~~~~~~~~~~~~~~~~s~~~~~Li~~~L~~dP~~R~t~~e~l~Hp~f 423 (492)
..+. ++..++.++.++|.+||..||++|||+.++++||||
T Consensus 219 -----~~~~---------~~~~~~~~~~~~i~~~l~~~p~~Rp~~~~ll~~~~~ 258 (258)
T cd08215 219 -----QYPP---------IPSQYSSELRNLVSSLLQKDPEERPSIAQILQSPFI 258 (258)
T ss_pred -----CCCC---------CCCCCCHHHHHHHHHHcCCChhhCcCHHHHhcCCCC
Confidence 0111 123468899999999999999999999999999998
No 261
>cd05064 PTKc_EphR_A10 Catalytic domain of the Protein Tyrosine Kinase, Ephrin Receptor A10. Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; EphA10 receptor; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephrin ligand to EphR requires cell-cell contact since both are anchor
Probab=100.00 E-value=7e-40 Score=317.85 Aligned_cols=245 Identities=22% Similarity=0.251 Sum_probs=191.6
Q ss_pred cceeEeeeeccCCceEEEEEEEc---CCCCEEEEEEeccch-----hhHHHHHHHHHHcCCCCccccceeeeeccCCCce
Q 011138 137 ISYMAERVVGTGSFGVVFQAKCL---ETGDSVAIKKVLQDK-----RYKNRELQIMRLLNHPNVVSLKHCFFSTTEKDEL 208 (492)
Q Consensus 137 ~~y~~~~~lG~G~fg~Vy~~~~~---~~g~~vAiK~~~~~~-----~~~~~E~~il~~l~h~nIv~l~~~~~~~~~~~~~ 208 (492)
.+|.+.+.||+|+||.||+|.+. ..+..||+|.+.... ..+.+|+.+++.++||||+++++++. ...
T Consensus 5 ~~~~~~~~ig~G~fg~V~~~~~~~~~~~~~~vaik~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~-----~~~ 79 (266)
T cd05064 5 KSIKIERILGTGRFGELCRGCLKLPSKRELPVAIHTLRAGCSDKQRRGFLAEALTLGQFDHSNIVRLEGVIT-----RGN 79 (266)
T ss_pred HHeEEeeeecccCCCeEEEEEEecCCCceeeEEEEecCCCCCHHHHHHHHHHHHHHhcCCCCCcCeEEEEEe-----cCC
Confidence 35999999999999999999765 456789999886432 23457999999999999999999884 334
Q ss_pred EEEEEeeechhhHHHHhhhhhhcCCCcCHHHHHHHHHHHHHHHHHHHhhCCcccCCCCCCceEEcCCCCcEEEeeecCcc
Q 011138 209 YLNLVLEYISETVYRVSKHYTRMNQHVPILYVQLYTYQICRALNYLHHVVGVCHRDIKPQNLLVNPHTHQLKICDFGSAK 288 (492)
Q Consensus 209 ~~~lV~E~~~~~l~~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~yLH~~~givHrDlKp~NILl~~~~~~vkL~DFG~a~ 288 (492)
.+++||||++++.+..... .....+++..+..++.||+.||+|||+ +|++||||||+|||++.++ .+||+|||.+.
T Consensus 80 ~~~lv~e~~~~~~L~~~l~--~~~~~l~~~~~~~~~~~i~~al~~lH~-~~iiH~dikp~nili~~~~-~~~l~dfg~~~ 155 (266)
T cd05064 80 TMMIVTEYMSNGALDSFLR--KHEGQLVAGQLMGMLPGLASGMKYLSE-MGYVHKGLAAHKVLVNSDL-VCKISGFRRLQ 155 (266)
T ss_pred CcEEEEEeCCCCcHHHHHH--hCCCCCCHHHHHHHHHHHHHHHHHHHH-CCEeeccccHhhEEEcCCC-cEEECCCcccc
Confidence 5889999999765543222 223468899999999999999999997 9999999999999999887 79999999876
Q ss_pred ccCCCCCCc--cceeccCccCchhhcCCCCCCcchhhHHHHHHHHHHHh-CCCCCCCCChHHHHHHHHHHhCCCCHHHHh
Q 011138 289 MLVPGEPNI--SYICSRYYRAPELIFGATEYTTAIDMWSIGCVLAELLL-GQPLFPGESGVDQLVEIIKILGTPTREEIK 365 (492)
Q Consensus 289 ~~~~~~~~~--~~~gt~~y~aPE~~~~~~~~~~~~DvwSlGvil~ell~-G~~pf~~~~~~~~~~~i~~~~g~p~~~~~~ 365 (492)
......... ...++..|+|||++.+. .++.++|||||||++|||++ |..||.+.+..+.+..+...
T Consensus 156 ~~~~~~~~~~~~~~~~~~y~aPE~~~~~-~~~~~~Di~slG~~l~ell~~g~~p~~~~~~~~~~~~~~~~---------- 224 (266)
T cd05064 156 EDKSEAIYTTMSGKSPVLWAAPEAIQYH-HFSSASDVWSFGIVMWEVMSYGERPYWDMSGQDVIKAVEDG---------- 224 (266)
T ss_pred cccccchhcccCCCCceeecCHHHHhhC-CccchhHHHHHHHHHHHHhcCCCCCcCcCCHHHHHHHHHCC----------
Confidence 532221111 23346789999998654 58999999999999999775 99999887766554443221
Q ss_pred hcCCCCcccCCCcccCCCcccccCCCCChhHhhhhccccccCCCCcCCHHHhhC
Q 011138 366 CMNPNYTEFKFPQIKAHPWHKIFHKRMPPEALDLVSRLLQYSPSLRCTALEACA 419 (492)
Q Consensus 366 ~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~Li~~~L~~dP~~R~t~~e~l~ 419 (492)
...+ .+..++..+.+++.+||+.||.+||++.++++
T Consensus 225 --------~~~~----------~~~~~~~~~~~li~~c~~~~p~~RP~~~~i~~ 260 (266)
T cd05064 225 --------FRLP----------APRNCPNLLHQLMLDCWQKERGERPRFSQIHS 260 (266)
T ss_pred --------CCCC----------CCCCCCHHHHHHHHHHcCCCchhCCCHHHHHH
Confidence 0011 12346889999999999999999999999864
No 262
>cd06626 STKc_MEKK4 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 4. Serine/threonine kinases (STKs), MAP/ERK kinase kinase 4 (MEKK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK4 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. MEKK4 activates the c-Jun N-terminal kinase (JNK) and p38 MAPK signaling pathways by directly activating their respective MAPKKs, MKK4
Probab=100.00 E-value=3.2e-39 Score=311.98 Aligned_cols=251 Identities=29% Similarity=0.489 Sum_probs=197.1
Q ss_pred ceeEeeeeccCCceEEEEEEEcCCCCEEEEEEeccch------hhHHHHHHHHHHcCCCCccccceeeeeccCCCceEEE
Q 011138 138 SYMAERVVGTGSFGVVFQAKCLETGDSVAIKKVLQDK------RYKNRELQIMRLLNHPNVVSLKHCFFSTTEKDELYLN 211 (492)
Q Consensus 138 ~y~~~~~lG~G~fg~Vy~~~~~~~g~~vAiK~~~~~~------~~~~~E~~il~~l~h~nIv~l~~~~~~~~~~~~~~~~ 211 (492)
+|.+.+.||+|+||.||+|.+..+++.||+|.+.... ....+|+.+++.++|+||+++++++ .+...++
T Consensus 1 ~y~~~~~lg~G~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~~~~l~~~~i~~~~~~~-----~~~~~~~ 75 (264)
T cd06626 1 RWQRGNKIGGGTFGKVYTAVNLDTGELMAVKEIRIQDNDPKTIKEIADEMKVLELLKHPNLVKYYGVE-----VHREKVY 75 (264)
T ss_pred CceeeeEeecCCCcEEEEEEECCCCcEEEEEEEECcccchHHHHHHHHHHHHHHhCCCCChhheeeeE-----ecCCEEE
Confidence 4889999999999999999999999999999885432 2445799999999999999999987 3445688
Q ss_pred EEeeechhhHHHHhhhhhhcCCCcCHHHHHHHHHHHHHHHHHHHhhCCcccCCCCCCceEEcCCCCcEEEeeecCccccC
Q 011138 212 LVLEYISETVYRVSKHYTRMNQHVPILYVQLYTYQICRALNYLHHVVGVCHRDIKPQNLLVNPHTHQLKICDFGSAKMLV 291 (492)
Q Consensus 212 lV~E~~~~~l~~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~yLH~~~givHrDlKp~NILl~~~~~~vkL~DFG~a~~~~ 291 (492)
+|+||+.++.+.... .....+++..++.++.|++.||.|||+ .||+|+||+|+||+++.++ .+||+|||++....
T Consensus 76 lv~e~~~~~~L~~~~---~~~~~~~~~~~~~i~~~i~~~l~~lh~-~~i~H~dl~~~nil~~~~~-~~kl~d~g~~~~~~ 150 (264)
T cd06626 76 IFMEYCSGGTLEELL---EHGRILDEHVIRVYTLQLLEGLAYLHS-HGIVHRDIKPANIFLDHNG-VIKLGDFGCAVKLK 150 (264)
T ss_pred EEEecCCCCcHHHHH---hhcCCCChHHHHHHHHHHHHHHHHHHH-CCcccCCCCHHHEEECCCC-CEEEcccccccccC
Confidence 999999865443221 123457888899999999999999997 9999999999999999877 79999999987764
Q ss_pred CCCCC-----ccceeccCccCchhhcCCC--CCCcchhhHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCCHHHH
Q 011138 292 PGEPN-----ISYICSRYYRAPELIFGAT--EYTTAIDMWSIGCVLAELLLGQPLFPGESGVDQLVEIIKILGTPTREEI 364 (492)
Q Consensus 292 ~~~~~-----~~~~gt~~y~aPE~~~~~~--~~~~~~DvwSlGvil~ell~G~~pf~~~~~~~~~~~i~~~~g~p~~~~~ 364 (492)
..... ....++..|+|||++.+.. .++.++|||||||++|+|++|..||...+........... +.
T Consensus 151 ~~~~~~~~~~~~~~~~~~~~~PE~~~~~~~~~~~~~~Dv~s~G~il~~l~~g~~pf~~~~~~~~~~~~~~~-~~------ 223 (264)
T cd06626 151 NNTTTMGEEVQSLAGTPAYMAPEVITGGKGKGHGRAADIWSLGCVVLEMATGKRPWSELDNEFQIMFHVGA-GH------ 223 (264)
T ss_pred CCCCcccccccCCcCCcCccChhhccCCCCCCCCcccchHHHHHHHHHHHhCCCCccCCcchHHHHHHHhc-CC------
Confidence 33221 1346788999999986543 3788999999999999999999999765433222222111 10
Q ss_pred hhcCCCCcccCCCcccCCCcccccCCCCChhHhhhhccccccCCCCcCCHHHhhCCCCC
Q 011138 365 KCMNPNYTEFKFPQIKAHPWHKIFHKRMPPEALDLVSRLLQYSPSLRCTALEACAHPFF 423 (492)
Q Consensus 365 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~Li~~~L~~dP~~R~t~~e~l~Hp~f 423 (492)
...+|. ...+++.+.+||.+||+.||.+|||+.+++.|||+
T Consensus 224 --------~~~~~~----------~~~~~~~~~~li~~~l~~~p~~R~~~~~i~~~~~~ 264 (264)
T cd06626 224 --------KPPIPD----------SLQLSPEGKDFLDRCLESDPKKRPTASELLQHPFV 264 (264)
T ss_pred --------CCCCCc----------ccccCHHHHHHHHHHccCCcccCCCHHHHhcCCCC
Confidence 011111 12358899999999999999999999999999996
No 263
>cd08216 PK_STRAD Pseudokinase domain of STE20-related kinase adapter protein. Protein Kinase family, STE20-related kinase adapter protein (STRAD) subfamily, pseudokinase domain. The STRAD subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hyperpigmentation of the buc
Probab=100.00 E-value=1.2e-39 Score=323.86 Aligned_cols=277 Identities=20% Similarity=0.277 Sum_probs=195.0
Q ss_pred eeEeeeeccCCceEEEEEEEcCCCCEEEEEEeccc------hhhHHHHHHHHHHcCCCCccccceeeeeccCCCceEEEE
Q 011138 139 YMAERVVGTGSFGVVFQAKCLETGDSVAIKKVLQD------KRYKNRELQIMRLLNHPNVVSLKHCFFSTTEKDELYLNL 212 (492)
Q Consensus 139 y~~~~~lG~G~fg~Vy~~~~~~~g~~vAiK~~~~~------~~~~~~E~~il~~l~h~nIv~l~~~~~~~~~~~~~~~~l 212 (492)
|.+++.+|.|++ ||.+++..+|+.||||++... .....+|+.+++.++|+||++++++|. +....++
T Consensus 4 ~~i~~~~~~~~~--v~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~Ei~~l~~l~h~~i~~~~~~~~-----~~~~~~~ 76 (314)
T cd08216 4 TLIGKCFEDLMI--VHLAKHKPTNTLVAVKKINLDSCSKEDLKLLQQEIITSRQLQHPNILPYVTSFI-----VDSELYV 76 (314)
T ss_pred hhhhHhhcCCce--EEEEEecCCCCEEEEEEEeccccchhHHHHHHHHHHHHHhcCCcchhhhhheee-----cCCeEEE
Confidence 344444555544 555556669999999998543 134568999999999999999999883 4445889
Q ss_pred EeeechhhHH-HHhhhhhhcCCCcCHHHHHHHHHHHHHHHHHHHhhCCcccCCCCCCceEEcCCCCcEEEeeecCccccC
Q 011138 213 VLEYISETVY-RVSKHYTRMNQHVPILYVQLYTYQICRALNYLHHVVGVCHRDIKPQNLLVNPHTHQLKICDFGSAKMLV 291 (492)
Q Consensus 213 V~E~~~~~l~-~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~yLH~~~givHrDlKp~NILl~~~~~~vkL~DFG~a~~~~ 291 (492)
+|||++++.+ .++... ....+++..+..++.||+.||+|||+ +||+||||||+||+++.++ .+||+|||.+....
T Consensus 77 ~~e~~~~~~l~~~l~~~--~~~~~~~~~~~~~~~~l~~~L~~LH~-~~ivH~dlk~~Nili~~~~-~~kl~d~~~~~~~~ 152 (314)
T cd08216 77 VSPLMAYGSCEDLLKTH--FPEGLPELAIAFILKDVLNALDYIHS-KGFIHRSVKASHILLSGDG-KVVLSGLRYSVSMI 152 (314)
T ss_pred EEeccCCCCHHHHHHHh--cccCCCHHHHHHHHHHHHHHHHHHHH-CCeecCCCCcceEEEecCC-ceEEecCccceeec
Confidence 9999996544 333321 23458889999999999999999997 8999999999999999877 79999999886553
Q ss_pred CCCC--------CccceeccCccCchhhcCC-CCCCcchhhHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCCHH
Q 011138 292 PGEP--------NISYICSRYYRAPELIFGA-TEYTTAIDMWSIGCVLAELLLGQPLFPGESGVDQLVEIIKILGTPTRE 362 (492)
Q Consensus 292 ~~~~--------~~~~~gt~~y~aPE~~~~~-~~~~~~~DvwSlGvil~ell~G~~pf~~~~~~~~~~~i~~~~g~p~~~ 362 (492)
.... .....++..|+|||++.+. ..++.++|+|||||++|+|++|..||........+.+.. .+.....
T Consensus 153 ~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~Diws~G~il~el~~g~~pf~~~~~~~~~~~~~--~~~~~~~ 230 (314)
T cd08216 153 KHGKRQRVVHDFPKSSVKNLPWLSPEVLQQNLQGYNEKSDIYSVGITACELANGHVPFKDMPATQMLLEKV--RGTVPCL 230 (314)
T ss_pred cccccccccccccccccccccccCHHHhcCCCCCCCcchhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHH--hccCccc
Confidence 2211 1234567889999998653 348899999999999999999999998766544333222 1211110
Q ss_pred HH----hhcCCCCcc----cCCCcccCCCcccccCCCCChhHhhhhccccccCCCCcCCHHHhhCCCCCCCCCCC
Q 011138 363 EI----KCMNPNYTE----FKFPQIKAHPWHKIFHKRMPPEALDLVSRLLQYSPSLRCTALEACAHPFFDDLRDP 429 (492)
Q Consensus 363 ~~----~~~~~~~~~----~~~~~~~~~~~~~~~~~~~s~~~~~Li~~~L~~dP~~R~t~~e~l~Hp~f~~~~~~ 429 (492)
.. ......... ...+. ............++.++.+||.+||..||++|||+.+++.||||+.++..
T Consensus 231 ~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~ll~~p~~~~~~~~ 304 (314)
T cd08216 231 LDKSTYPLYEDSMSQSRSSNEHPN-NRDSVDHPYTRTFSEHFHQFVELCLQRDPESRPSASQLLNHSFFKQCKRR 304 (314)
T ss_pred cccCchhhhcCCcCcccccccccc-hhhhhhcchhhHHHHHHHHHHHHHhhcCCCcCcCHHHHhcCchHhhhccc
Confidence 00 000000000 00000 01111122233456789999999999999999999999999999988743
No 264
>cd05579 STKc_MAST_like Catalytic domain of Microtubule-associated serine/threonine kinase-like proteins. Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The MAST kinase subfamily includes MAST kinases, MAST-like (MASTL) kinases, and fungal kinases with similarity to Saccharomyces cerevisiae Rim15 and Schizosaccharomyces pombe cek1. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. MASTL kinases carry only a catalytic domain which contains a long insert re
Probab=100.00 E-value=2.2e-39 Score=312.81 Aligned_cols=243 Identities=33% Similarity=0.563 Sum_probs=195.9
Q ss_pred eccCCceEEEEEEEcCCCCEEEEEEeccch-------hhHHHHHHHHHHcCCCCccccceeeeeccCCCceEEEEEeeec
Q 011138 145 VGTGSFGVVFQAKCLETGDSVAIKKVLQDK-------RYKNRELQIMRLLNHPNVVSLKHCFFSTTEKDELYLNLVLEYI 217 (492)
Q Consensus 145 lG~G~fg~Vy~~~~~~~g~~vAiK~~~~~~-------~~~~~E~~il~~l~h~nIv~l~~~~~~~~~~~~~~~~lV~E~~ 217 (492)
||.|+||.||++.+..+|+.|++|.+.... ....+|+++++.++||||+++++++ ......|+||||+
T Consensus 1 lg~g~~~~vy~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~-----~~~~~~~lv~e~~ 75 (265)
T cd05579 1 ISKGAYGRVFLAKKKSTGDIYAIKVIKKADMIRKNQVDQVLTERDILSQAQSPYVVKLYYSF-----QGKKNLYLVMEYL 75 (265)
T ss_pred CCCCCceEEEEEEECCCCCEEEEEEecchhhhhhhHHHHHHHHHHHHHhCCCcchhHHHHhe-----ecCcEEEEEEecC
Confidence 689999999999999999999999885432 2345789999999999999999887 4455689999999
Q ss_pred hh-hHHHHhhhhhhcCCCcCHHHHHHHHHHHHHHHHHHHhhCCcccCCCCCCceEEcCCCCcEEEeeecCccccCCCC--
Q 011138 218 SE-TVYRVSKHYTRMNQHVPILYVQLYTYQICRALNYLHHVVGVCHRDIKPQNLLVNPHTHQLKICDFGSAKMLVPGE-- 294 (492)
Q Consensus 218 ~~-~l~~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~yLH~~~givHrDlKp~NILl~~~~~~vkL~DFG~a~~~~~~~-- 294 (492)
.+ .+...+.. ...+++..+..++.||+.||.|||+ .||+||||+|+||+++.++ .++|+|||++.......
T Consensus 76 ~~~~L~~~l~~----~~~~~~~~~~~i~~qi~~~L~~lH~-~~i~H~di~~~nil~~~~~-~~~l~dfg~~~~~~~~~~~ 149 (265)
T cd05579 76 PGGDLASLLEN----VGSLDEDVARIYIAEIVLALEYLHS-NGIIHRDLKPDNILIDSNG-HLKLTDFGLSKVGLVRRQI 149 (265)
T ss_pred CCCcHHHHHHH----cCCCCHHHHHHHHHHHHHHHHHHHH-cCeecCCCCHHHeEEcCCC-CEEEEecccchhcccCccc
Confidence 86 44444332 2368899999999999999999997 9999999999999999888 89999999987543321
Q ss_pred -------CCccceeccCccCchhhcCCCCCCcchhhHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCCHHHHhhc
Q 011138 295 -------PNISYICSRYYRAPELIFGATEYTTAIDMWSIGCVLAELLLGQPLFPGESGVDQLVEIIKILGTPTREEIKCM 367 (492)
Q Consensus 295 -------~~~~~~gt~~y~aPE~~~~~~~~~~~~DvwSlGvil~ell~G~~pf~~~~~~~~~~~i~~~~g~p~~~~~~~~ 367 (492)
......++..|+|||.+.+.. ++.++|||||||++|+|++|..||......+....+..
T Consensus 150 ~~~~~~~~~~~~~~~~~~~~Pe~~~~~~-~~~~~Dv~slG~~~~~l~~g~~p~~~~~~~~~~~~~~~------------- 215 (265)
T cd05579 150 NLNDDEKEDKRIVGTPDYIAPEVILGQG-HSKTVDWWSLGCILYEFLVGIPPFHGETPEEIFQNILN------------- 215 (265)
T ss_pred ccccccccccCcccCccccCHHHhcCCC-CCcchhhHHHHHHHHHHHhCCCCCCCCCHHHHHHHHhc-------------
Confidence 122356788999999986654 88999999999999999999999988776555444322
Q ss_pred CCCCcccCCCcccCCCcccccCCCCChhHhhhhccccccCCCCcCCH---HHhhCCCCCCCC
Q 011138 368 NPNYTEFKFPQIKAHPWHKIFHKRMPPEALDLVSRLLQYSPSLRCTA---LEACAHPFFDDL 426 (492)
Q Consensus 368 ~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~Li~~~L~~dP~~R~t~---~e~l~Hp~f~~~ 426 (492)
....++.. ..++.++.+||.+||+.||.+|||+ .++++||||+++
T Consensus 216 ----~~~~~~~~----------~~~~~~~~~~i~~~l~~~p~~Rpt~~~~~~~l~~~~~~~~ 263 (265)
T cd05579 216 ----GKIEWPED----------VEVSDEAIDLISKLLVPDPEKRLGAKSIEEIKNHPFFKGI 263 (265)
T ss_pred ----CCcCCCcc----------ccCCHHHHHHHHHHhcCCHhhcCCCccHHHHhcCccccCC
Confidence 01111110 1248899999999999999999999 999999999875
No 265
>cd06641 STKc_MST3 Catalytic domain of the Protein Serine/Threonine Kinase, Mammalian Ste20-like protein kinase 3. Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 3 (MST3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MST3 phosphorylates the STK NDR and may play a role in cell cycle progression and cell morphology. It may also regulate paxillin and consequently, cell migration. MST3 is present in human placenta, where it plays an essential role in the oxidative stress-induced apoptosis of trophoblasts in normal spontaneous delivery. Dysregulation of trophoblast apoptosis may result in pregnancy complications such as preeclampsia and int
Probab=100.00 E-value=1.7e-39 Score=317.04 Aligned_cols=250 Identities=26% Similarity=0.378 Sum_probs=200.0
Q ss_pred eeEeeeeccCCceEEEEEEEcCCCCEEEEEEeccch-----hhHHHHHHHHHHcCCCCccccceeeeeccCCCceEEEEE
Q 011138 139 YMAERVVGTGSFGVVFQAKCLETGDSVAIKKVLQDK-----RYKNRELQIMRLLNHPNVVSLKHCFFSTTEKDELYLNLV 213 (492)
Q Consensus 139 y~~~~~lG~G~fg~Vy~~~~~~~g~~vAiK~~~~~~-----~~~~~E~~il~~l~h~nIv~l~~~~~~~~~~~~~~~~lV 213 (492)
|.+.+.||.|+||.||+|.+..+++.||||.+.... ....+|+.+++.++||||+++++++ .+..+.|+|
T Consensus 6 ~~~~~~ig~G~~~~vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~-----~~~~~~~lv 80 (277)
T cd06641 6 FTKLEKIGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYVTKYYGSY-----LKDTKLWII 80 (277)
T ss_pred hhhheeEeecCCeEEEEEEECCCCcEEEEEEeccccchHHHHHHHHHHHHHHhcCCCCEeEEEEEE-----EeCCeEEEE
Confidence 778889999999999999999999999999875322 2355799999999999999999988 344468899
Q ss_pred eeechhhHHHHhhhhhhcCCCcCHHHHHHHHHHHHHHHHHHHhhCCcccCCCCCCceEEcCCCCcEEEeeecCccccCCC
Q 011138 214 LEYISETVYRVSKHYTRMNQHVPILYVQLYTYQICRALNYLHHVVGVCHRDIKPQNLLVNPHTHQLKICDFGSAKMLVPG 293 (492)
Q Consensus 214 ~E~~~~~l~~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~yLH~~~givHrDlKp~NILl~~~~~~vkL~DFG~a~~~~~~ 293 (492)
|||++++.+..... ...+++..+..++.|++.||.|||+ .|++|+||||+||+++.++ .++|+|||++......
T Consensus 81 ~e~~~~~~l~~~i~----~~~~~~~~~~~~~~~l~~~l~~lh~-~~i~h~dl~p~Ni~i~~~~-~~~l~dfg~~~~~~~~ 154 (277)
T cd06641 81 MEYLGGGSALDLLE----PGPLDETQIATILREILKGLDYLHS-EKKIHRDIKAANVLLSEHG-EVKLADFGVAGQLTDT 154 (277)
T ss_pred EEeCCCCcHHHHHh----cCCCCHHHHHHHHHHHHHHHHHHcc-CCeecCCCCHHhEEECCCC-CEEEeecccceecccc
Confidence 99998754432211 2457889999999999999999997 9999999999999999887 7999999998765432
Q ss_pred CC-CccceeccCccCchhhcCCCCCCcchhhHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCCHHHHhhcCCCCc
Q 011138 294 EP-NISYICSRYYRAPELIFGATEYTTAIDMWSIGCVLAELLLGQPLFPGESGVDQLVEIIKILGTPTREEIKCMNPNYT 372 (492)
Q Consensus 294 ~~-~~~~~gt~~y~aPE~~~~~~~~~~~~DvwSlGvil~ell~G~~pf~~~~~~~~~~~i~~~~g~p~~~~~~~~~~~~~ 372 (492)
.. .....++..|+|||.+.+. .++.++|+|||||++|+|++|..||...........+...
T Consensus 155 ~~~~~~~~~~~~y~~PE~~~~~-~~~~~~Dv~slG~~l~~l~~g~~p~~~~~~~~~~~~~~~~----------------- 216 (277)
T cd06641 155 QIKRNTFVGTPFWMAPEVIKQS-AYDSKADIWSLGITAIELAKGEPPHSELHPMKVLFLIPKN----------------- 216 (277)
T ss_pred hhhhccccCCccccChhhhccC-CCCchhhHHHHHHHHHHHHcCCCCCCccchHHHHHHHhcC-----------------
Confidence 21 2235678899999998654 4788999999999999999999999776543333322110
Q ss_pred ccCCCcccCCCcccccCCCCChhHhhhhccccccCCCCcCCHHHhhCCCCCCCCCC
Q 011138 373 EFKFPQIKAHPWHKIFHKRMPPEALDLVSRLLQYSPSLRCTALEACAHPFFDDLRD 428 (492)
Q Consensus 373 ~~~~~~~~~~~~~~~~~~~~s~~~~~Li~~~L~~dP~~R~t~~e~l~Hp~f~~~~~ 428 (492)
..+ .+...++.++.++|.+||..||.+||++.++++||||.+...
T Consensus 217 --~~~---------~~~~~~~~~~~~~i~~~l~~~p~~Rp~~~~~l~~~~~~~~~~ 261 (277)
T cd06641 217 --NPP---------TLEGNYSKPLKEFVEACLNKEPSFRPTAKELLKHKFIVRFAK 261 (277)
T ss_pred --CCC---------CCCcccCHHHHHHHHHHccCChhhCcCHHHHHhCHHHhhhhh
Confidence 000 012346889999999999999999999999999999987543
No 266
>cd05610 STKc_MASTL Catalytic domain of the Protein Serine/Threonine Kinase, Microtubule-associated serine/threonine-like kinase. Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, MAST-like (MASTL) kinases, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. The MASTL kinases in this group carry only a catalytic domain, which contains a long insertion relative to MAST kinases. The human MASTL gene has also been labelled FLJ14813. A missense mutation in FLJ1481
Probab=100.00 E-value=2.5e-39 Score=351.29 Aligned_cols=141 Identities=26% Similarity=0.415 Sum_probs=121.1
Q ss_pred cceeEeeeeccCCceEEEEEEEcCCCCEEEEEEeccch-------hhHHHHHHHHHHcCCCCccccceeeeeccCCCceE
Q 011138 137 ISYMAERVVGTGSFGVVFQAKCLETGDSVAIKKVLQDK-------RYKNRELQIMRLLNHPNVVSLKHCFFSTTEKDELY 209 (492)
Q Consensus 137 ~~y~~~~~lG~G~fg~Vy~~~~~~~g~~vAiK~~~~~~-------~~~~~E~~il~~l~h~nIv~l~~~~~~~~~~~~~~ 209 (492)
.+|.+.+.||+|+||.||+|.+..+++.||||++.... ....+|+.+++.++||||+++++++ ....+
T Consensus 4 ~~y~i~~~LG~G~fg~Vy~a~~~~~~~~vAiKvi~~~~~~~~~~~~~~~~E~~~l~~l~hp~Iv~~~~~~-----~~~~~ 78 (669)
T cd05610 4 EEFVIVKPISRGAFGKVYLGRKKNNSKLYAVKVVKKADMINKNMVHQVQAERDALALSKSPFIVHLYYSL-----QSANN 78 (669)
T ss_pred CCEEEEEEEecCCCeEEEEEEECCCCcEEEEEEEehhhccCHHHHHHHHHHHHHHHhcCCCCcCeEEEEE-----EECCE
Confidence 46999999999999999999999999999999986432 4456799999999999999999887 34446
Q ss_pred EEEEeeechh-hHHHHhhhhhhcCCCcCHHHHHHHHHHHHHHHHHHHhhCCcccCCCCCCceEEcCCCCcEEEeeecCcc
Q 011138 210 LNLVLEYISE-TVYRVSKHYTRMNQHVPILYVQLYTYQICRALNYLHHVVGVCHRDIKPQNLLVNPHTHQLKICDFGSAK 288 (492)
Q Consensus 210 ~~lV~E~~~~-~l~~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~yLH~~~givHrDlKp~NILl~~~~~~vkL~DFG~a~ 288 (492)
+||||||+.+ .|..++.. ...+++..++.|+.||+.||.|||. +|||||||||+||||+.++ .+||+|||+++
T Consensus 79 ~~lVmEy~~g~~L~~li~~----~~~l~~~~~~~i~~qil~aL~yLH~-~gIiHrDLKP~NILl~~~g-~vkL~DFGls~ 152 (669)
T cd05610 79 VYLVMEYLIGGDVKSLLHI----YGYFDEEMAVKYISEVALALDYLHR-HGIIHRDLKPDNMLISNEG-HIKLTDFGLSK 152 (669)
T ss_pred EEEEEeCCCCCCHHHHHHh----cCCCCHHHHHHHHHHHHHHHHHHHh-CCEEeCCccHHHEEEcCCC-CEEEEeCCCCc
Confidence 8999999975 45444332 3457888899999999999999997 8999999999999999887 79999999875
No 267
>cd06657 STKc_PAK4 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 4. Serine/threonine kinases (STKs), p21-activated kinase (PAK) 4, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK4 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK4 regulates cell mo
Probab=100.00 E-value=1.9e-39 Score=319.41 Aligned_cols=254 Identities=28% Similarity=0.419 Sum_probs=201.5
Q ss_pred eeEeeeeccCCceEEEEEEEcCCCCEEEEEEeccc----hhhHHHHHHHHHHcCCCCccccceeeeeccCCCceEEEEEe
Q 011138 139 YMAERVVGTGSFGVVFQAKCLETGDSVAIKKVLQD----KRYKNRELQIMRLLNHPNVVSLKHCFFSTTEKDELYLNLVL 214 (492)
Q Consensus 139 y~~~~~lG~G~fg~Vy~~~~~~~g~~vAiK~~~~~----~~~~~~E~~il~~l~h~nIv~l~~~~~~~~~~~~~~~~lV~ 214 (492)
|.....||+|+||.||++....+|+.||||++... .....+|+.+++.++|+||++++++|. ...+.++||
T Consensus 22 ~~~~~~lg~g~~g~v~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~-----~~~~~~lv~ 96 (292)
T cd06657 22 LDNFIKIGEGSTGIVCIATVKSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSYL-----VGDELWVVM 96 (292)
T ss_pred hhhHHHcCCCCCeEEEEEEEcCCCeEEEEEEecccchhHHHHHHHHHHHHHhcCCcchhheeeEEE-----eCCEEEEEE
Confidence 34446799999999999999999999999987432 223457999999999999999999884 344689999
Q ss_pred eechhhHHHHhhhhhhcCCCcCHHHHHHHHHHHHHHHHHHHhhCCcccCCCCCCceEEcCCCCcEEEeeecCccccCCCC
Q 011138 215 EYISETVYRVSKHYTRMNQHVPILYVQLYTYQICRALNYLHHVVGVCHRDIKPQNLLVNPHTHQLKICDFGSAKMLVPGE 294 (492)
Q Consensus 215 E~~~~~l~~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~yLH~~~givHrDlKp~NILl~~~~~~vkL~DFG~a~~~~~~~ 294 (492)
||++++.+..... ...+++..+..++.|++.||+|||+ .||+||||||+||+++.++ .++|+|||++.......
T Consensus 97 e~~~~~~L~~~~~----~~~~~~~~~~~~~~ql~~~l~~lH~-~givH~dl~p~Nilv~~~~-~~~l~dfg~~~~~~~~~ 170 (292)
T cd06657 97 EFLEGGALTDIVT----HTRMNEEQIAAVCLAVLKALSVLHA-QGVIHRDIKSDSILLTHDG-RVKLSDFGFCAQVSKEV 170 (292)
T ss_pred ecCCCCcHHHHHh----cCCCCHHHHHHHHHHHHHHHHHHHH-CCeecCCCCHHHEEECCCC-CEEEcccccceeccccc
Confidence 9998765543221 2457888999999999999999997 8999999999999999887 79999999987553322
Q ss_pred -CCccceeccCccCchhhcCCCCCCcchhhHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCCHHHHhhcCCCCcc
Q 011138 295 -PNISYICSRYYRAPELIFGATEYTTAIDMWSIGCVLAELLLGQPLFPGESGVDQLVEIIKILGTPTREEIKCMNPNYTE 373 (492)
Q Consensus 295 -~~~~~~gt~~y~aPE~~~~~~~~~~~~DvwSlGvil~ell~G~~pf~~~~~~~~~~~i~~~~g~p~~~~~~~~~~~~~~ 373 (492)
......|++.|+|||.+.+ ..++.++|+||+||++|+|++|..||.+....+.+..+...+ +
T Consensus 171 ~~~~~~~~~~~y~~pE~~~~-~~~~~~~Dv~slGvil~el~tg~~p~~~~~~~~~~~~~~~~~--~-------------- 233 (292)
T cd06657 171 PRRKSLVGTPYWMAPELISR-LPYGPEVDIWSLGIMVIEMVDGEPPYFNEPPLKAMKMIRDNL--P-------------- 233 (292)
T ss_pred ccccccccCccccCHHHhcC-CCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhhC--C--------------
Confidence 2234568899999998854 447899999999999999999999998776554443332210 0
Q ss_pred cCCCcccCCCcccccCCCCChhHhhhhccccccCCCCcCCHHHhhCCCCCCCCCCCC
Q 011138 374 FKFPQIKAHPWHKIFHKRMPPEALDLVSRLLQYSPSLRCTALEACAHPFFDDLRDPN 430 (492)
Q Consensus 374 ~~~~~~~~~~~~~~~~~~~s~~~~~Li~~~L~~dP~~R~t~~e~l~Hp~f~~~~~~~ 430 (492)
..+. ....+++++.++|.+||+.||.+||++.+++.||||.....+.
T Consensus 234 ~~~~----------~~~~~~~~l~~li~~~l~~~P~~R~~~~~ll~~~~~~~~~~~~ 280 (292)
T cd06657 234 PKLK----------NLHKVSPSLKGFLDRLLVRDPAQRATAAELLKHPFLAKAGPPS 280 (292)
T ss_pred cccC----------CcccCCHHHHHHHHHHHhCCcccCcCHHHHhcChHHhccCCCc
Confidence 0000 1124688999999999999999999999999999999877544
No 268
>cd05061 PTKc_InsR Catalytic domain of the Protein Tyrosine Kinase, Insulin Receptor. Protein Tyrosine Kinase (PTK) family; Insulin Receptor (InsR); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. InsR is a receptor tyr kinase (RTK) that is composed of two alphabeta heterodimers. Binding of the insulin ligand to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, stimulating downstream kinase activities, which initiate signaling cascades and biological function. InsR signaling plays an important role in many cellular processes including glucose homeostasis, glycogen synthesis, lipid and protein meta
Probab=100.00 E-value=3.8e-39 Score=316.42 Aligned_cols=256 Identities=23% Similarity=0.321 Sum_probs=195.5
Q ss_pred cccceeEeeeeccCCceEEEEEEEcC-----CCCEEEEEEeccch-----hhHHHHHHHHHHcCCCCccccceeeeeccC
Q 011138 135 QTISYMAERVVGTGSFGVVFQAKCLE-----TGDSVAIKKVLQDK-----RYKNRELQIMRLLNHPNVVSLKHCFFSTTE 204 (492)
Q Consensus 135 ~~~~y~~~~~lG~G~fg~Vy~~~~~~-----~g~~vAiK~~~~~~-----~~~~~E~~il~~l~h~nIv~l~~~~~~~~~ 204 (492)
...+|.+.+.||+|+||.||+|.++. .+..||+|.+.... ....+|+.+++.++||||+++++++
T Consensus 4 ~~~~~~i~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~----- 78 (288)
T cd05061 4 SREKITLLRELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCHHVVRLLGVV----- 78 (288)
T ss_pred cHHHceeeeeecCCCCcEEEEEEEeccCCCCcceEEEEEECCCcCCHHHHHHHHHHHHHHHhCCCCCeeeEEEEE-----
Confidence 34579999999999999999997642 35579999875332 2234689999999999999999987
Q ss_pred CCceEEEEEeeechh-hHHHHhhhhhhc------CCCcCHHHHHHHHHHHHHHHHHHHhhCCcccCCCCCCceEEcCCCC
Q 011138 205 KDELYLNLVLEYISE-TVYRVSKHYTRM------NQHVPILYVQLYTYQICRALNYLHHVVGVCHRDIKPQNLLVNPHTH 277 (492)
Q Consensus 205 ~~~~~~~lV~E~~~~-~l~~~~~~~~~~------~~~~~~~~~~~i~~qi~~aL~yLH~~~givHrDlKp~NILl~~~~~ 277 (492)
.+....|+||||+.+ +|.+.+...... ........+..++.||+.||.|||+ +||+||||||+|||++.++
T Consensus 79 ~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH~-~~i~H~dikp~nili~~~~- 156 (288)
T cd05061 79 SKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADGMAYLNA-KKFVHRDLAARNCMVAHDF- 156 (288)
T ss_pred cCCCCcEEEEeCCCCCCHHHHHHHhccccccCCCCCCCCHHHHHHHHHHHHHHHHHHHh-CCCcCCCCChheEEEcCCC-
Confidence 333458899999985 455554332211 1234566788899999999999997 9999999999999999877
Q ss_pred cEEEeeecCccccCCCCC---CccceeccCccCchhhcCCCCCCcchhhHHHHHHHHHHHh-CCCCCCCCChHHHHHHHH
Q 011138 278 QLKICDFGSAKMLVPGEP---NISYICSRYYRAPELIFGATEYTTAIDMWSIGCVLAELLL-GQPLFPGESGVDQLVEII 353 (492)
Q Consensus 278 ~vkL~DFG~a~~~~~~~~---~~~~~gt~~y~aPE~~~~~~~~~~~~DvwSlGvil~ell~-G~~pf~~~~~~~~~~~i~ 353 (492)
.+||+|||+++....... .....++..|+|||.+.+. .++.++|+|||||++|||++ |..||.+.+..+....+.
T Consensus 157 ~~~L~Dfg~~~~~~~~~~~~~~~~~~~~~~y~~pE~~~~~-~~~~~~DvwslG~~l~el~~~~~~p~~~~~~~~~~~~~~ 235 (288)
T cd05061 157 TVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMAPESLKDG-VFTTSSDMWSFGVVLWEITSLAEQPYQGLSNEQVLKFVM 235 (288)
T ss_pred cEEECcCCccccccccccccccCCCcccccccCHHHhccC-CCChHhHHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHH
Confidence 799999999875533221 1123456789999998654 48999999999999999998 799998876554433332
Q ss_pred HHhCCCCHHHHhhcCCCCcccCCCcccCCCcccccCCCCChhHhhhhccccccCCCCcCCHHHhhC------CCCCCCC
Q 011138 354 KILGTPTREEIKCMNPNYTEFKFPQIKAHPWHKIFHKRMPPEALDLVSRLLQYSPSLRCTALEACA------HPFFDDL 426 (492)
Q Consensus 354 ~~~g~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~Li~~~L~~dP~~R~t~~e~l~------Hp~f~~~ 426 (492)
.. +. .. ++...++.++++|.+||+.||++|||+.++++ ||||.++
T Consensus 236 ~~-~~---------------~~------------~~~~~~~~~~~li~~~l~~~p~~Rps~~~ll~~l~~~~~~~~~~~ 286 (288)
T cd05061 236 DG-GY---------------LD------------QPDNCPERVTDLMRMCWQFNPKMRPTFLEIVNLLKDDLHPSFPEV 286 (288)
T ss_pred cC-CC---------------CC------------CCCCCCHHHHHHHHHHcCCChhHCcCHHHHHHHHHhhcCCCCCCC
Confidence 10 00 00 11345789999999999999999999999986 9999875
No 269
>cd05054 PTKc_VEGFR Catalytic domain of the Protein Tyrosine Kinases, Vascular Endothelial Growth Factor Receptors. Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor (VEGFR) subfamily; catalytic (c) domain. The VEGFR subfamily consists of VEGFR1 (Flt1), VEGFR2 (Flk1), VEGFR3 (Flt4), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. In VEGFR3, the fifth Ig-like domain is replaced by a disulfide bridge. The binding of VEGFRs to their ligands, the VEGFs, leads to recepto
Probab=100.00 E-value=1.2e-39 Score=327.37 Aligned_cols=251 Identities=25% Similarity=0.361 Sum_probs=191.5
Q ss_pred ccceeEeeeeccCCceEEEEEEEcC-----CCCEEEEEEeccch-----hhHHHHHHHHHHc-CCCCccccceeeeeccC
Q 011138 136 TISYMAERVVGTGSFGVVFQAKCLE-----TGDSVAIKKVLQDK-----RYKNRELQIMRLL-NHPNVVSLKHCFFSTTE 204 (492)
Q Consensus 136 ~~~y~~~~~lG~G~fg~Vy~~~~~~-----~g~~vAiK~~~~~~-----~~~~~E~~il~~l-~h~nIv~l~~~~~~~~~ 204 (492)
..+|++.+.||+|+||.||+|.+.. +++.||+|++.... ....+|+.+++++ +|+||+++++++...
T Consensus 6 ~~~~~i~~~lG~G~fg~Vy~a~~~~~~~~~~~~~va~K~~~~~~~~~~~~~~~~E~~~~~~l~~h~niv~~~~~~~~~-- 83 (337)
T cd05054 6 RDRLKLGKPLGRGAFGKVIQASAFGIEKSASCRTVAVKMLKEGATASEYKALMTELKILIHIGHHLNVVNLLGACTKP-- 83 (337)
T ss_pred HHHhhhhcccccCcCceEEeccccccccccccceeeeeeccCCCCHHHHHHHHHHHHHHHhhccCcchhheeeeEecC--
Confidence 3479999999999999999997543 45789999875321 2344699999999 799999999987532
Q ss_pred CCceEEEEEeeechhh-HHHHhhhhhh-----------------------------------------------------
Q 011138 205 KDELYLNLVLEYISET-VYRVSKHYTR----------------------------------------------------- 230 (492)
Q Consensus 205 ~~~~~~~lV~E~~~~~-l~~~~~~~~~----------------------------------------------------- 230 (492)
...+++||||+.++ +...+.....
T Consensus 84 --~~~~~~v~ey~~~~~L~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 161 (337)
T cd05054 84 --GGPLMVIVEYCKFGNLSNYLRSKRECFSPYRNKSTRKREMKQKEGKKQRLDSVSSSQSSASSGFIEDKSLSDVEEDEE 161 (337)
T ss_pred --CCCEEEEEecCCCCCHHHHHHhccccccccccccccccccccccccccccccCCccccccccccccCcchhhcccchh
Confidence 23578999999864 4333321110
Q ss_pred ----cCCCcCHHHHHHHHHHHHHHHHHHHhhCCcccCCCCCCceEEcCCCCcEEEeeecCccccCCCCC---Cccceecc
Q 011138 231 ----MNQHVPILYVQLYTYQICRALNYLHHVVGVCHRDIKPQNLLVNPHTHQLKICDFGSAKMLVPGEP---NISYICSR 303 (492)
Q Consensus 231 ----~~~~~~~~~~~~i~~qi~~aL~yLH~~~givHrDlKp~NILl~~~~~~vkL~DFG~a~~~~~~~~---~~~~~gt~ 303 (492)
....+++..+..++.||+.||.|||+ +||+||||||+|||++.++ .+||+|||++..+..... .....++.
T Consensus 162 ~~~~~~~~l~~~~~~~~~~qi~~aL~~lH~-~~ivHrDikp~Nill~~~~-~vkL~DfG~a~~~~~~~~~~~~~~~~~~~ 239 (337)
T cd05054 162 GDELYKEPLTLEDLISYSFQVARGMEFLAS-RKCIHRDLAARNILLSENN-VVKICDFGLARDIYKDPDYVRKGDARLPL 239 (337)
T ss_pred hhHHhhcCCCHHHHHHHHHHHHHHHHHHHh-CCeecCCCCcceEEEeCCC-cEEEeccccchhcccCcchhhccCCCCCc
Confidence 12367888899999999999999997 9999999999999999877 799999999986533221 12334567
Q ss_pred CccCchhhcCCCCCCcchhhHHHHHHHHHHHh-CCCCCCCCChHHHHHHHHHHhCCCCHHHHhhcCCCCcccCCCcccCC
Q 011138 304 YYRAPELIFGATEYTTAIDMWSIGCVLAELLL-GQPLFPGESGVDQLVEIIKILGTPTREEIKCMNPNYTEFKFPQIKAH 382 (492)
Q Consensus 304 ~y~aPE~~~~~~~~~~~~DvwSlGvil~ell~-G~~pf~~~~~~~~~~~i~~~~g~p~~~~~~~~~~~~~~~~~~~~~~~ 382 (492)
.|+|||++.+. .++.++|||||||++|||++ |..||.+....+.+...+... ....
T Consensus 240 ~y~aPE~~~~~-~~~~~~Di~SlGv~l~el~t~g~~p~~~~~~~~~~~~~~~~~---------------~~~~------- 296 (337)
T cd05054 240 KWMAPESIFDK-VYTTQSDVWSFGVLLWEIFSLGASPYPGVQIDEEFCRRLKEG---------------TRMR------- 296 (337)
T ss_pred cccCcHHhcCC-CCCccccHHHHHHHHHHHHHcCCCCCCCCCccHHHHHHHhcc---------------CCCC-------
Confidence 89999999765 48999999999999999997 999998755444433332210 0000
Q ss_pred CcccccCCCCChhHhhhhccccccCCCCcCCHHHhhCC
Q 011138 383 PWHKIFHKRMPPEALDLVSRLLQYSPSLRCTALEACAH 420 (492)
Q Consensus 383 ~~~~~~~~~~s~~~~~Li~~~L~~dP~~R~t~~e~l~H 420 (492)
.+...++++.+++.+||+.+|++||++.++++|
T Consensus 297 -----~~~~~~~~~~~l~~~cl~~~p~~RPs~~ell~~ 329 (337)
T cd05054 297 -----APEYATPEIYSIMLDCWHNNPEDRPTFSELVEI 329 (337)
T ss_pred -----CCccCCHHHHHHHHHHccCChhhCcCHHHHHHH
Confidence 113467899999999999999999999999874
No 270
>cd05052 PTKc_Abl Catalytic domain of the Protein Tyrosine Kinase, Abelson kinase. Protein Tyrosine Kinase (PTK) family; Abelson (Abl) kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Abl (or c-Abl) is a ubiquitously-expressed cytoplasmic (or nonreceptor) tyr kinase that contains SH3, SH2, and tyr kinase domains in its N-terminal region, as well as nuclear localization motifs, a putative DNA-binding domain, and F- and G-actin binding domains in its C-terminal tail. It also contains a short autoinhibitory cap region in its N-terminus. Abl is normally inactive and requires phosphorylation and myristoylation for activation. Abl function depends on its subcellular localization. In the cytoplasm, Abl plays
Probab=100.00 E-value=4e-39 Score=311.86 Aligned_cols=245 Identities=22% Similarity=0.348 Sum_probs=194.2
Q ss_pred cceeEeeeeccCCceEEEEEEEcCCCCEEEEEEeccch---hhHHHHHHHHHHcCCCCccccceeeeeccCCCceEEEEE
Q 011138 137 ISYMAERVVGTGSFGVVFQAKCLETGDSVAIKKVLQDK---RYKNRELQIMRLLNHPNVVSLKHCFFSTTEKDELYLNLV 213 (492)
Q Consensus 137 ~~y~~~~~lG~G~fg~Vy~~~~~~~g~~vAiK~~~~~~---~~~~~E~~il~~l~h~nIv~l~~~~~~~~~~~~~~~~lV 213 (492)
..|.+.+.||+|+||.||+|.+..+++.||+|.+..+. ....+|+++++.++|+||+++++++ .....+++|
T Consensus 6 ~~~~~~~~ig~g~~~~v~~~~~~~~~~~~~~K~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~-----~~~~~~~lv 80 (263)
T cd05052 6 TDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVC-----TREPPFYII 80 (263)
T ss_pred HHeEEeeecCCcccceEEEEEEecCCceEEEEEecCCchHHHHHHHHHHHHHhCCCCChhheEEEE-----cCCCCcEEE
Confidence 35889999999999999999999999999999886543 2345799999999999999999987 334458899
Q ss_pred eeechhh-HHHHhhhhhhcCCCcCHHHHHHHHHHHHHHHHHHHhhCCcccCCCCCCceEEcCCCCcEEEeeecCccccCC
Q 011138 214 LEYISET-VYRVSKHYTRMNQHVPILYVQLYTYQICRALNYLHHVVGVCHRDIKPQNLLVNPHTHQLKICDFGSAKMLVP 292 (492)
Q Consensus 214 ~E~~~~~-l~~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~yLH~~~givHrDlKp~NILl~~~~~~vkL~DFG~a~~~~~ 292 (492)
|||++++ +.+.+.. .....+++..+..++.|++.||.|||+ +||+||||||+|||++.++ .+||+|||++.....
T Consensus 81 ~e~~~~~~L~~~~~~--~~~~~l~~~~~~~~~~ql~~~l~~lH~-~~i~H~dlkp~nil~~~~~-~~kl~df~~~~~~~~ 156 (263)
T cd05052 81 TEFMTYGNLLDYLRE--CNRQEVNAVVLLYMATQISSAMEYLEK-KNFIHRDLAARNCLVGENH-LVKVADFGLSRLMTG 156 (263)
T ss_pred EEeCCCCcHHHHHHh--CCCCCCCHHHHHHHHHHHHHHHHHHHh-CCEeecccCcceEEEcCCC-cEEeCCCcccccccc
Confidence 9999854 4443322 123457888899999999999999997 9999999999999999877 799999999976543
Q ss_pred CCCC--ccceeccCccCchhhcCCCCCCcchhhHHHHHHHHHHHh-CCCCCCCCChHHHHHHHHHHhCCCCHHHHhhcCC
Q 011138 293 GEPN--ISYICSRYYRAPELIFGATEYTTAIDMWSIGCVLAELLL-GQPLFPGESGVDQLVEIIKILGTPTREEIKCMNP 369 (492)
Q Consensus 293 ~~~~--~~~~gt~~y~aPE~~~~~~~~~~~~DvwSlGvil~ell~-G~~pf~~~~~~~~~~~i~~~~g~p~~~~~~~~~~ 369 (492)
.... ....++..|+|||.+.+. .++.++|||||||++|||++ |..||.+.+..+....+...
T Consensus 157 ~~~~~~~~~~~~~~y~aPE~~~~~-~~~~~~Dv~slG~il~el~t~g~~p~~~~~~~~~~~~~~~~-------------- 221 (263)
T cd05052 157 DTYTAHAGAKFPIKWTAPESLAYN-KFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELLEKG-------------- 221 (263)
T ss_pred ceeeccCCCCCccccCCHHHhccC-CCCchhHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHHCC--------------
Confidence 3211 122335679999998654 48899999999999999998 99999887654443333210
Q ss_pred CCcccCCCcccCCCcccccCCCCChhHhhhhccccccCCCCcCCHHHhhC
Q 011138 370 NYTEFKFPQIKAHPWHKIFHKRMPPEALDLVSRLLQYSPSLRCTALEACA 419 (492)
Q Consensus 370 ~~~~~~~~~~~~~~~~~~~~~~~s~~~~~Li~~~L~~dP~~R~t~~e~l~ 419 (492)
+. ...+..++.++.+||.+||..||++||++.++++
T Consensus 222 ----~~----------~~~~~~~~~~~~~li~~cl~~~p~~Rp~~~~l~~ 257 (263)
T cd05052 222 ----YR----------MERPEGCPPKVYELMRACWQWNPSDRPSFAEIHQ 257 (263)
T ss_pred ----CC----------CCCCCCCCHHHHHHHHHHccCCcccCCCHHHHHH
Confidence 00 0122457899999999999999999999999875
No 271
>cd05581 STKc_PDK1 Catalytic domain of the Protein Serine/Threonine Kinase, Phosphoinositide-dependent kinase 1. Serine/Threonine Kinases (STKs), Phosphoinositide-dependent kinase 1 (PDK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PDK1 carries an N-terminal catalytic domain and a C-terminal pleckstrin homology (PH) domain that binds phosphoinositides. It phosphorylates the activation loop of AGC kinases that are regulated by PI3K such as PKB, SGK, and PKC, among others, and is crucial for their activation. Thus, it contributes in regulating many processes including metabolism, growth, proliferation, and survival. PDK1 also has the ability to auto
Probab=100.00 E-value=3.2e-39 Score=314.58 Aligned_cols=245 Identities=34% Similarity=0.607 Sum_probs=200.9
Q ss_pred ceeEeeeeccCCceEEEEEEEcCCCCEEEEEEeccc-------hhhHHHHHHHHHHcC-CCCccccceeeeeccCCCceE
Q 011138 138 SYMAERVVGTGSFGVVFQAKCLETGDSVAIKKVLQD-------KRYKNRELQIMRLLN-HPNVVSLKHCFFSTTEKDELY 209 (492)
Q Consensus 138 ~y~~~~~lG~G~fg~Vy~~~~~~~g~~vAiK~~~~~-------~~~~~~E~~il~~l~-h~nIv~l~~~~~~~~~~~~~~ 209 (492)
+|.+.+.||+|+||.||+|.+..+|+.||+|++... .....+|..+++.++ |+||+++++++ .+...
T Consensus 2 ~y~~~~~lg~g~~~~vy~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~e~~~~~~l~~~~~i~~~~~~~-----~~~~~ 76 (280)
T cd05581 2 DFKFGKIIGEGSFSTVVLAKEKETNKEYAIKILDKRQLIKEKKVKYVKIEKEVLTRLNGHPGIIKLYYTF-----QDEEN 76 (280)
T ss_pred CceEeeeecCCCceEEEEEEEcCCCCEEEEEEechHhccchHHHHHHHHHHHHHHhcccCCCchhHHHHh-----cCCce
Confidence 599999999999999999999999999999988542 233457899999998 99999999988 44556
Q ss_pred EEEEeeech-hhHHHHhhhhhhcCCCcCHHHHHHHHHHHHHHHHHHHhhCCcccCCCCCCceEEcCCCCcEEEeeecCcc
Q 011138 210 LNLVLEYIS-ETVYRVSKHYTRMNQHVPILYVQLYTYQICRALNYLHHVVGVCHRDIKPQNLLVNPHTHQLKICDFGSAK 288 (492)
Q Consensus 210 ~~lV~E~~~-~~l~~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~yLH~~~givHrDlKp~NILl~~~~~~vkL~DFG~a~ 288 (492)
+++||||+. +++.+.+.. ...+++..+..++.||+.||.|||+ .|++|+||||+||+++.++ .++|+|||++.
T Consensus 77 ~~lv~e~~~~~~L~~~l~~----~~~l~~~~~~~i~~ql~~~l~~Lh~-~~~~H~dl~~~ni~i~~~~-~~~l~df~~~~ 150 (280)
T cd05581 77 LYFVLEYAPNGELLQYIRK----YGSLDEKCTRFYAAEILLALEYLHS-KGIIHRDLKPENILLDKDM-HIKITDFGTAK 150 (280)
T ss_pred EEEEEcCCCCCcHHHHHHH----cCCCCHHHHHHHHHHHHHHHHHHHH-CCeeecCCCHHHeEECCCC-CEEecCCcccc
Confidence 899999995 455554432 3468999999999999999999997 9999999999999999887 79999999987
Q ss_pred ccCCCC---------------------CCccceeccCccCchhhcCCCCCCcchhhHHHHHHHHHHHhCCCCCCCCChHH
Q 011138 289 MLVPGE---------------------PNISYICSRYYRAPELIFGATEYTTAIDMWSIGCVLAELLLGQPLFPGESGVD 347 (492)
Q Consensus 289 ~~~~~~---------------------~~~~~~gt~~y~aPE~~~~~~~~~~~~DvwSlGvil~ell~G~~pf~~~~~~~ 347 (492)
...... ......++..|+|||++.+. .++.++|+|||||++|+|++|..||...+...
T Consensus 151 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Pe~~~~~-~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~ 229 (280)
T cd05581 151 VLDPNSSPESNKGDATNIDSQIEKNRRRFASFVGTAEYVSPELLNEK-PAGKSSDLWALGCIIYQMLTGKPPFRGSNEYL 229 (280)
T ss_pred ccCCccccccCCCCCccccccccccccccccccCCccccCHHHhCCC-CCChhhhHHHHHHHHHHHHhCCCCCCCccHHH
Confidence 653322 11234678899999998654 48899999999999999999999998877544
Q ss_pred HHHHHHHHhCCCCHHHHhhcCCCCcccCCCcccCCCcccccCCCCChhHhhhhccccccCCCCcCCH----HHhhCCCCC
Q 011138 348 QLVEIIKILGTPTREEIKCMNPNYTEFKFPQIKAHPWHKIFHKRMPPEALDLVSRLLQYSPSLRCTA----LEACAHPFF 423 (492)
Q Consensus 348 ~~~~i~~~~g~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~Li~~~L~~dP~~R~t~----~e~l~Hp~f 423 (492)
.+..+.. .... ++..+++.+.+||.+||+.||.+||++ .++++||||
T Consensus 230 ~~~~~~~-----------------~~~~------------~~~~~~~~~~~li~~~l~~~p~~R~~~~~~~~~ll~~~~~ 280 (280)
T cd05581 230 TFQKILK-----------------LEYS------------FPPNFPPDAKDLIEKLLVLDPQDRLGVNEGYDELKAHPFF 280 (280)
T ss_pred HHHHHHh-----------------cCCC------------CCCccCHHHHHHHHHHhcCCHhhCCCcccCHHHHhcCCCC
Confidence 4444332 1111 223468899999999999999999999 999999998
No 272
>cd05613 STKc_MSK1_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase 1. Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, MSK1, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, which trigger phosphorylation in the activation loop (A-loop) of the CTD of MSK. The active CTD phosphorylates the hydroph
Probab=100.00 E-value=3.1e-39 Score=317.19 Aligned_cols=255 Identities=29% Similarity=0.480 Sum_probs=199.2
Q ss_pred ceeEeeeeccCCceEEEEEEEc---CCCCEEEEEEeccc--------hhhHHHHHHHHHHc-CCCCccccceeeeeccCC
Q 011138 138 SYMAERVVGTGSFGVVFQAKCL---ETGDSVAIKKVLQD--------KRYKNRELQIMRLL-NHPNVVSLKHCFFSTTEK 205 (492)
Q Consensus 138 ~y~~~~~lG~G~fg~Vy~~~~~---~~g~~vAiK~~~~~--------~~~~~~E~~il~~l-~h~nIv~l~~~~~~~~~~ 205 (492)
+|++.+.||.|+||.||+|.+. .+|..||+|.+... .....+|+.+++.+ +|+||++++++| .
T Consensus 1 ~y~~~~~lg~G~~g~v~~~~~~~~~~~g~~~aiK~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~i~~~~~~~-----~ 75 (290)
T cd05613 1 NFELLKVLGTGAYGKVFLVRKVSGHDSGKLYAMKVLKKATIVQKAKTTEHTRTERQVLEHIRQSPFLVTLHYAF-----Q 75 (290)
T ss_pred CceeeeeeccCCcceEEEEEeccCCCCCceEEEEEeehhhhhhcchHHHHHHHHHHHHHhcccCCChhceeeEe-----e
Confidence 3889999999999999999874 47899999988542 13345799999999 599999999888 4
Q ss_pred CceEEEEEeeechhh-HHHHhhhhhhcCCCcCHHHHHHHHHHHHHHHHHHHhhCCcccCCCCCCceEEcCCCCcEEEeee
Q 011138 206 DELYLNLVLEYISET-VYRVSKHYTRMNQHVPILYVQLYTYQICRALNYLHHVVGVCHRDIKPQNLLVNPHTHQLKICDF 284 (492)
Q Consensus 206 ~~~~~~lV~E~~~~~-l~~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~yLH~~~givHrDlKp~NILl~~~~~~vkL~DF 284 (492)
....+|+||||+.++ +...+. ....+++..+..++.||+.||.|||+ .|++||||||+|||++.++ .+||+||
T Consensus 76 ~~~~~~lv~e~~~~~~L~~~l~----~~~~l~~~~~~~~~~qi~~al~~lH~-~~i~H~dl~p~nil~~~~~-~~kl~df 149 (290)
T cd05613 76 TDTKLHLILDYINGGELFTHLS----QRERFKEQEVQIYSGEIVLALEHLHK-LGIIYRDIKLENILLDSNG-HVVLTDF 149 (290)
T ss_pred cCCeEEEEEecCCCCcHHHHHH----HcCCCCHHHHHHHHHHHHHHHHHHHh-CCeeccCCCHHHeEECCCC-CEEEeeC
Confidence 455789999999965 333322 23568889999999999999999997 9999999999999999887 7999999
Q ss_pred cCccccCCCC--CCccceeccCccCchhhcCC-CCCCcchhhHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCCH
Q 011138 285 GSAKMLVPGE--PNISYICSRYYRAPELIFGA-TEYTTAIDMWSIGCVLAELLLGQPLFPGESGVDQLVEIIKILGTPTR 361 (492)
Q Consensus 285 G~a~~~~~~~--~~~~~~gt~~y~aPE~~~~~-~~~~~~~DvwSlGvil~ell~G~~pf~~~~~~~~~~~i~~~~g~p~~ 361 (492)
|++....... ......|+..|+|||.+.+. ..++.++|||||||++|+|++|..||...........+...+...
T Consensus 150 g~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~Dv~slG~~l~~ll~g~~p~~~~~~~~~~~~~~~~~~~~-- 227 (290)
T cd05613 150 GLSKEFHEDEVERAYSFCGTIEYMAPDIVRGGDGGHDKAVDWWSMGVLMYELLTGASPFTVDGEKNSQAEISRRILKS-- 227 (290)
T ss_pred ccceecccccccccccccCCcccCChhhccCCCCCCCccccHHHHHHHHHHHhcCCCCCCcCCccccHHHHHHHhhcc--
Confidence 9997653322 22345689999999998643 246789999999999999999999997543322222222211000
Q ss_pred HHHhhcCCCCcccCCCcccCCCcccccCCCCChhHhhhhccccccCCCCcC-----CHHHhhCCCCCCCCCC
Q 011138 362 EEIKCMNPNYTEFKFPQIKAHPWHKIFHKRMPPEALDLVSRLLQYSPSLRC-----TALEACAHPFFDDLRD 428 (492)
Q Consensus 362 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~Li~~~L~~dP~~R~-----t~~e~l~Hp~f~~~~~ 428 (492)
. ..+++.+++.+.+|+.+||+.||.+|+ ++.+++.||||+....
T Consensus 228 -----------~------------~~~~~~~~~~~~~ll~~~l~~~p~~R~~~~~~~~~~l~~~~~~~~~~~ 276 (290)
T cd05613 228 -----------E------------PPYPQEMSALAKDIIQRLLMKDPKKRLGCGPSDADEIKKHPFFQKINW 276 (290)
T ss_pred -----------C------------CCCCccCCHHHHHHHHHHhcCCHHHhcCCCCCCHHHHHcCcccccCCH
Confidence 0 002234788999999999999999997 8999999999998763
No 273
>cd08228 STKc_Nek6 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 6. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 6 (Nek6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek6 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek6 is required for the transition from metaphase to anaphase. It also plays important roles in mitotic spindle formation and cytokinesis. Activated by Nek9 during mitosis, Nek6 phosphorylates Eg5, a kinesin that is important for spindle bipolarity. Nek6 localizes to spindle microtubules during metaphase
Probab=100.00 E-value=2.7e-39 Score=313.35 Aligned_cols=249 Identities=28% Similarity=0.459 Sum_probs=195.6
Q ss_pred cceeEeeeeccCCceEEEEEEEcCCCCEEEEEEeccc-------hhhHHHHHHHHHHcCCCCccccceeeeeccCCCceE
Q 011138 137 ISYMAERVVGTGSFGVVFQAKCLETGDSVAIKKVLQD-------KRYKNRELQIMRLLNHPNVVSLKHCFFSTTEKDELY 209 (492)
Q Consensus 137 ~~y~~~~~lG~G~fg~Vy~~~~~~~g~~vAiK~~~~~-------~~~~~~E~~il~~l~h~nIv~l~~~~~~~~~~~~~~ 209 (492)
.+|.+.+.||+|+||.||+|.+..+++.||||.+... .....+|+.+++.++||||+++++++.. ...
T Consensus 2 ~~~~i~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~-----~~~ 76 (267)
T cd08228 2 ANFQIEKKIGRGQFSEVYRATCLLDRKPVALKKVQIFEMMDAKARQDCVKEIDLLKQLNHPNVIKYLDSFIE-----DNE 76 (267)
T ss_pred cceeeeeeeccCCCeeEEEEEEeCCCCEEEEEEeeccccCCHHHHHHHHHHHHHHHhCCCcceeeeeeeEEE-----CCe
Confidence 3699999999999999999999999999999976421 1234579999999999999999998843 345
Q ss_pred EEEEeeechh-hHHHHhhhhhhcCCCcCHHHHHHHHHHHHHHHHHHHhhCCcccCCCCCCceEEcCCCCcEEEeeecCcc
Q 011138 210 LNLVLEYISE-TVYRVSKHYTRMNQHVPILYVQLYTYQICRALNYLHHVVGVCHRDIKPQNLLVNPHTHQLKICDFGSAK 288 (492)
Q Consensus 210 ~~lV~E~~~~-~l~~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~yLH~~~givHrDlKp~NILl~~~~~~vkL~DFG~a~ 288 (492)
.++||||+++ ++..++.........+++..+..++.||+.||.|||+ +||+|+||||+||+++.++ .++|+|||++.
T Consensus 77 ~~~v~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~LH~-~~i~H~dl~~~nil~~~~~-~~~l~d~g~~~ 154 (267)
T cd08228 77 LNIVLELADAGDLSQMIKYFKKQKRLIPERTVWKYFVQLCSAVEHMHS-RRVMHRDIKPANVFITATG-VVKLGDLGLGR 154 (267)
T ss_pred EEEEEEecCCCcHHHHHHHhhhccCCCCHHHHHHHHHHHHHHHHHHhh-CCeeCCCCCHHHEEEcCCC-CEEECccccce
Confidence 8899999996 4555554444445568889999999999999999997 9999999999999999887 79999999987
Q ss_pred ccCCCCC-CccceeccCccCchhhcCCCCCCcchhhHHHHHHHHHHHhCCCCCCCCCh-HHHHHHHHHHhCCCCHHHHhh
Q 011138 289 MLVPGEP-NISYICSRYYRAPELIFGATEYTTAIDMWSIGCVLAELLLGQPLFPGESG-VDQLVEIIKILGTPTREEIKC 366 (492)
Q Consensus 289 ~~~~~~~-~~~~~gt~~y~aPE~~~~~~~~~~~~DvwSlGvil~ell~G~~pf~~~~~-~~~~~~i~~~~g~p~~~~~~~ 366 (492)
....... .....|++.|+|||.+.+.. ++.++|+|||||++|+|++|..||..... ...+...+...+.
T Consensus 155 ~~~~~~~~~~~~~~~~~~~aPE~~~~~~-~~~~~Di~slG~~l~el~~g~~p~~~~~~~~~~~~~~~~~~~~-------- 225 (267)
T cd08228 155 FFSSKTTAAHSLVGTPYYMSPERIHENG-YNFKSDIWSLGCLLYEMAALQSPFYGDKMNLFSLCQKIEQCDY-------- 225 (267)
T ss_pred eccchhHHHhcCCCCccccChhhhccCC-CCchhhHHHHHHHHHHHhcCCCCCccccccHHHHHHHHhcCCC--------
Confidence 6543221 22356888999999986654 78999999999999999999999965432 1222222221111
Q ss_pred cCCCCcccCCCcccCCCcccccCCCCChhHhhhhccccccCCCCcCCHHHhhC
Q 011138 367 MNPNYTEFKFPQIKAHPWHKIFHKRMPPEALDLVSRLLQYSPSLRCTALEACA 419 (492)
Q Consensus 367 ~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~Li~~~L~~dP~~R~t~~e~l~ 419 (492)
+.. ....++.++.+||.+||..||++||++.++++
T Consensus 226 ----------~~~--------~~~~~~~~~~~li~~cl~~~p~~Rp~~~~vl~ 260 (267)
T cd08228 226 ----------PPL--------PTEHYSEKLRELVSMCIYPDPDQRPDIGYVHQ 260 (267)
T ss_pred ----------CCC--------ChhhcCHHHHHHHHHHCCCCcccCcCHHHHHH
Confidence 110 11236788999999999999999999999986
No 274
>KOG0608 consensus Warts/lats-like serine threonine kinases [Cell cycle control, cell division, chromosome partitioning]
Probab=100.00 E-value=2.3e-40 Score=330.85 Aligned_cols=252 Identities=28% Similarity=0.465 Sum_probs=201.2
Q ss_pred ceeEeeeeccCCceEEEEEEEcCCCCEEEEEEeccchh-------hHHHHHHHHHHcCCCCccccceeeeeccCCCceEE
Q 011138 138 SYMAERVVGTGSFGVVFQAKCLETGDSVAIKKVLQDKR-------YKNRELQIMRLLNHPNVVSLKHCFFSTTEKDELYL 210 (492)
Q Consensus 138 ~y~~~~~lG~G~fg~Vy~~~~~~~g~~vAiK~~~~~~~-------~~~~E~~il~~l~h~nIv~l~~~~~~~~~~~~~~~ 210 (492)
-|...+.||-|+||.|.++....|...||+|.+.+... ..+.|..||..-+.+-||+||-.| .|...+
T Consensus 630 mFvkik~iGvGAFGeV~Lv~KvDT~~lYAmKTLrKaDVl~rnQvaHVKAERDILAEADn~WVVrLyySF-----QDkdnL 704 (1034)
T KOG0608|consen 630 MFVKIKTIGVGAFGEVCLVRKVDTRALYAMKTLRKADVLMRNQVAHVKAERDILAEADNEWVVRLYYSF-----QDKDNL 704 (1034)
T ss_pred ceEEEeeecccccceeEEEeecchhhHHHHhhhHHHHHHhhhhhhhhhhhhhhHhhcCCcceEEEEEEe-----ccCCce
Confidence 48888999999999999999999999999998865432 234699999999999999999888 777789
Q ss_pred EEEeeechhh-HHHHhhhhhhcCCCcCHHHHHHHHHHHHHHHHHHHhhCCcccCCCCCCceEEcCCCCcEEEeeecCccc
Q 011138 211 NLVLEYISET-VYRVSKHYTRMNQHVPILYVQLYTYQICRALNYLHHVVGVCHRDIKPQNLLVNPHTHQLKICDFGSAKM 289 (492)
Q Consensus 211 ~lV~E~~~~~-l~~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~yLH~~~givHrDlKp~NILl~~~~~~vkL~DFG~a~~ 289 (492)
|+||||++|+ +..++- + -+-|++..+++|+.++..|+++.|+ .|+|||||||+|||||.+| .|||+|||+++-
T Consensus 705 YFVMdYIPGGDmMSLLI---r-mgIFeE~LARFYIAEltcAiesVHk-mGFIHRDiKPDNILIDrdG-HIKLTDFGLCTG 778 (1034)
T KOG0608|consen 705 YFVMDYIPGGDMMSLLI---R-MGIFEEDLARFYIAELTCAIESVHK-MGFIHRDIKPDNILIDRDG-HIKLTDFGLCTG 778 (1034)
T ss_pred EEEEeccCCccHHHHHH---H-hccCHHHHHHHHHHHHHHHHHHHHh-ccceecccCccceEEccCC-ceeeeecccccc
Confidence 9999999975 333322 2 3568999999999999999999998 7999999999999999999 599999999853
Q ss_pred c---------CCCCC----------------------------------CccceeccCccCchhhcCCCCCCcchhhHHH
Q 011138 290 L---------VPGEP----------------------------------NISYICSRYYRAPELIFGATEYTTAIDMWSI 326 (492)
Q Consensus 290 ~---------~~~~~----------------------------------~~~~~gt~~y~aPE~~~~~~~~~~~~DvwSl 326 (492)
+ ..+.. ....+||+.|+|||++... .|+..+|+||.
T Consensus 779 fRWTHdskYYq~gdH~RqDSmep~~e~~d~~~~lkvL~~ra~~~h~r~~ahslvgt~nyiapevl~r~-g~~q~cdwws~ 857 (1034)
T KOG0608|consen 779 FRWTHDSKYYQEGDHHRQDSMEPSPEWADISKCLKVLERRAMRQHQRILAHSLVGTPNYIAPEVLART-GYTQLCDWWSV 857 (1034)
T ss_pred ceeccccccccCCCccccccCCCchhhccccccchHHHHHHHhhhhhhhhhhhcCCCcccChHHhccc-CccccchhhHh
Confidence 2 11100 0145899999999999654 49999999999
Q ss_pred HHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCCHHHHhhcCCCCcccCCCcccCCCcccccCCCCChhHhhhhcccccc
Q 011138 327 GCVLAELLLGQPLFPGESGVDQLVEIIKILGTPTREEIKCMNPNYTEFKFPQIKAHPWHKIFHKRMPPEALDLVSRLLQY 406 (492)
Q Consensus 327 Gvil~ell~G~~pf~~~~~~~~~~~i~~~~g~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~Li~~~L~~ 406 (492)
|||||||+.|++||...+..+...+++.. . . .++-.+..++++++.+||.++ ..
T Consensus 858 gvil~em~~g~~pf~~~tp~~tq~kv~nw---------~------~----------~l~~~~~~~ls~e~~~li~kL-c~ 911 (1034)
T KOG0608|consen 858 GVILYEMLVGQPPFLADTPGETQYKVINW---------R------N----------FLHIPYQGNLSKEALDLIQKL-CC 911 (1034)
T ss_pred hHHHHHHhhCCCCccCCCCCcceeeeeeh---------h------h----------ccccccccccCHHHHHHHHHH-hc
Confidence 99999999999999887765544444321 0 0 111123357899999999985 46
Q ss_pred CCCCcCC---HHHhhCCCCCCCCC
Q 011138 407 SPSLRCT---ALEACAHPFFDDLR 427 (492)
Q Consensus 407 dP~~R~t---~~e~l~Hp~f~~~~ 427 (492)
+++.|+. ++|+..||||+.+.
T Consensus 912 sad~RLGkng~d~vKaHpfFkgID 935 (1034)
T KOG0608|consen 912 SADSRLGKNGADQVKAHPFFKGID 935 (1034)
T ss_pred ChhhhhcccchhhhhcCccccccc
Confidence 7888884 77899999999754
No 275
>PRK13184 pknD serine/threonine-protein kinase; Reviewed
Probab=100.00 E-value=2.5e-39 Score=350.45 Aligned_cols=249 Identities=24% Similarity=0.369 Sum_probs=191.0
Q ss_pred cceeEeeeeccCCceEEEEEEEcCCCCEEEEEEeccc-------hhhHHHHHHHHHHcCCCCccccceeeeeccCCCceE
Q 011138 137 ISYMAERVVGTGSFGVVFQAKCLETGDSVAIKKVLQD-------KRYKNRELQIMRLLNHPNVVSLKHCFFSTTEKDELY 209 (492)
Q Consensus 137 ~~y~~~~~lG~G~fg~Vy~~~~~~~g~~vAiK~~~~~-------~~~~~~E~~il~~l~h~nIv~l~~~~~~~~~~~~~~ 209 (492)
.+|.+.+.||+|+||.||+|.+..+|+.||||++..+ .....+|+.+++.++||||+++++++ .+...
T Consensus 2 grYeIi~~LGkGgfG~VYlA~d~~tg~~VAIK~I~~~l~~~e~~~~rflrEi~ILs~L~HPNIVkl~~v~-----~d~~~ 76 (932)
T PRK13184 2 QRYDIIRLIGKGGMGEVYLAYDPVCSRRVALKKIREDLSENPLLKKRFLREAKIAADLIHPGIVPVYSIC-----SDGDP 76 (932)
T ss_pred CCeEEEEEEecCCCEEEEEEEECCCCcEEEEEEECcccccCHHHHHHHHHHHHHHHhCCCcCcCeEEEEE-----eeCCE
Confidence 4699999999999999999999999999999998543 12345799999999999999999988 34446
Q ss_pred EEEEeeechhh-HHHHhhhhh-------hcCCCcCHHHHHHHHHHHHHHHHHHHhhCCcccCCCCCCceEEcCCCCcEEE
Q 011138 210 LNLVLEYISET-VYRVSKHYT-------RMNQHVPILYVQLYTYQICRALNYLHHVVGVCHRDIKPQNLLVNPHTHQLKI 281 (492)
Q Consensus 210 ~~lV~E~~~~~-l~~~~~~~~-------~~~~~~~~~~~~~i~~qi~~aL~yLH~~~givHrDlKp~NILl~~~~~~vkL 281 (492)
.|+||||++|+ +...+.... .....++...+..++.||+.||.|||+ +||+||||||+|||++.++ .+||
T Consensus 77 lyLVMEY~eGGSL~~lL~s~~~~~~l~e~~~~~lsv~~iL~I~~QIa~AL~yLHs-~GIIHRDLKPeNILLd~dg-~vKL 154 (932)
T PRK13184 77 VYYTMPYIEGYTLKSLLKSVWQKESLSKELAEKTSVGAFLSIFHKICATIEYVHS-KGVLHRDLKPDNILLGLFG-EVVI 154 (932)
T ss_pred EEEEEEcCCCCCHHHHHHHhhhccccchhhhcccCHHHHHHHHHHHHHHHHHHHH-CCccccCCchheEEEcCCC-CEEE
Confidence 89999999865 444433211 112345566778899999999999997 9999999999999999887 7999
Q ss_pred eeecCccccCCCC-------------------CCccceeccCccCchhhcCCCCCCcchhhHHHHHHHHHHHhCCCCCCC
Q 011138 282 CDFGSAKMLVPGE-------------------PNISYICSRYYRAPELIFGATEYTTAIDMWSIGCVLAELLLGQPLFPG 342 (492)
Q Consensus 282 ~DFG~a~~~~~~~-------------------~~~~~~gt~~y~aPE~~~~~~~~~~~~DvwSlGvil~ell~G~~pf~~ 342 (492)
+|||+++...... .....+||+.|+|||++.+. .++.++|||||||++|||++|..||..
T Consensus 155 iDFGLAk~i~~~~~~~~~l~~~~~~s~~s~~t~~g~~vGT~~YmAPE~l~g~-~~S~kSDIWSLGVILyELLTG~~PF~~ 233 (932)
T PRK13184 155 LDWGAAIFKKLEEEDLLDIDVDERNICYSSMTIPGKIVGTPDYMAPERLLGV-PASESTDIYALGVILYQMLTLSFPYRR 233 (932)
T ss_pred EecCcceecccccccccccccccccccccccccCCCCCCCCCCCCHHHhcCC-CCCcHhHHHHHHHHHHHHHHCCCCCCC
Confidence 9999997651110 11134799999999998665 489999999999999999999999987
Q ss_pred CChHHHHHHHHHHhCCCCHHHHhhcCCCCcccCCCcccCCCcccccCCCCChhHhhhhccccccCCCCcCCHHHhhC
Q 011138 343 ESGVDQLVEIIKILGTPTREEIKCMNPNYTEFKFPQIKAHPWHKIFHKRMPPEALDLVSRLLQYSPSLRCTALEACA 419 (492)
Q Consensus 343 ~~~~~~~~~i~~~~g~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~Li~~~L~~dP~~R~t~~e~l~ 419 (492)
......... .....|. .+ .+ ...+++.+.+++.+||..||++|++..+.+.
T Consensus 234 ~~~~ki~~~--~~i~~P~--------------~~-----~p-----~~~iP~~L~~LI~rcL~~DP~kR~ss~eeLl 284 (932)
T PRK13184 234 KKGRKISYR--DVILSPI--------------EV-----AP-----YREIPPFLSQIAMKALAVDPAERYSSVQELK 284 (932)
T ss_pred cchhhhhhh--hhccChh--------------hc-----cc-----cccCCHHHHHHHHHHccCChhhCcCHHHHHH
Confidence 554322211 1000000 00 00 1247889999999999999999998766553
No 276
>cd05048 PTKc_Ror Catalytic Domain of the Protein Tyrosine Kinases, Receptor tyrosine kinase-like Orphan Receptors. Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor (Ror) subfamily; catalytic (c) domain. The Ror subfamily consists of Ror1, Ror2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimer
Probab=100.00 E-value=1.8e-39 Score=317.49 Aligned_cols=248 Identities=23% Similarity=0.319 Sum_probs=195.0
Q ss_pred cceeEeeeeccCCceEEEEEEEcCCC-----CEEEEEEeccch-----hhHHHHHHHHHHcCCCCccccceeeeeccCCC
Q 011138 137 ISYMAERVVGTGSFGVVFQAKCLETG-----DSVAIKKVLQDK-----RYKNRELQIMRLLNHPNVVSLKHCFFSTTEKD 206 (492)
Q Consensus 137 ~~y~~~~~lG~G~fg~Vy~~~~~~~g-----~~vAiK~~~~~~-----~~~~~E~~il~~l~h~nIv~l~~~~~~~~~~~ 206 (492)
.+|.+.+.||+|+||.||+|.+...+ ..||+|.+.... ....+|+.+++.++||||+++++++ .+
T Consensus 5 ~~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~v~~K~~~~~~~~~~~~~~~~ei~~l~~l~h~~i~~~~~~~-----~~ 79 (283)
T cd05048 5 SAVRFLEELGEGAFGKVYKGELTGPNERLSATSVAIKTLKENAEPKVQQEFRQEAELMSDLQHPNIVCLLGVC-----TK 79 (283)
T ss_pred HHcchhhcccCccCCcEEEEEEecCCCCcceeeEEEEecccCCCHHHHHHHHHHHHHHHhcCCcccceEEEEE-----cC
Confidence 46889999999999999999876655 679999885432 2346799999999999999999988 34
Q ss_pred ceEEEEEeeechh-hHHHHhhhhhh------------cCCCcCHHHHHHHHHHHHHHHHHHHhhCCcccCCCCCCceEEc
Q 011138 207 ELYLNLVLEYISE-TVYRVSKHYTR------------MNQHVPILYVQLYTYQICRALNYLHHVVGVCHRDIKPQNLLVN 273 (492)
Q Consensus 207 ~~~~~lV~E~~~~-~l~~~~~~~~~------------~~~~~~~~~~~~i~~qi~~aL~yLH~~~givHrDlKp~NILl~ 273 (492)
....|++|||+.+ ++.+.+..... ....+++..+..++.||+.||.|||+ +||+||||||+||+++
T Consensus 80 ~~~~~~~~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~al~~lH~-~~i~H~dlkp~Nil~~ 158 (283)
T cd05048 80 EQPTCMLFEYLAHGDLHEFLVRNSPHSDVGAESGDETVKSSLDCSDFLHIAIQIAAGMEYLSS-HHFVHRDLAARNCLVG 158 (283)
T ss_pred CCceEEEEecCCCCcHHHHHHhcCCCcccccccccccccCCCCHHHHHHHHHHHHHHHHHHHh-CCeeccccccceEEEc
Confidence 4458899999985 45444432211 11457888899999999999999997 9999999999999999
Q ss_pred CCCCcEEEeeecCccccCCCC---CCccceeccCccCchhhcCCCCCCcchhhHHHHHHHHHHHh-CCCCCCCCChHHHH
Q 011138 274 PHTHQLKICDFGSAKMLVPGE---PNISYICSRYYRAPELIFGATEYTTAIDMWSIGCVLAELLL-GQPLFPGESGVDQL 349 (492)
Q Consensus 274 ~~~~~vkL~DFG~a~~~~~~~---~~~~~~gt~~y~aPE~~~~~~~~~~~~DvwSlGvil~ell~-G~~pf~~~~~~~~~ 349 (492)
.++ .+||+|||+++...... ......+++.|+|||.+.+. .++.++|||||||++|||++ |..||.+.+..+..
T Consensus 159 ~~~-~~~L~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~-~~~~~sDv~slG~il~el~~~g~~p~~~~~~~~~~ 236 (283)
T cd05048 159 EGL-TVKISDFGLSRDIYSADYYRVQSKSLLPVRWMPPEAILYG-KFTTESDIWSFGVVLWEIFSYGLQPYYGFSNQEVI 236 (283)
T ss_pred CCC-cEEECCCcceeeccccccccccCCCcccccccCHHHhccC-cCchhhhHHHHHHHHHHHHcCCCCCCCCCCHHHHH
Confidence 877 79999999997653322 12234568889999998654 48999999999999999997 99999887765544
Q ss_pred HHHHHHhCCCCHHHHhhcCCCCcccCCCcccCCCcccccCCCCChhHhhhhccccccCCCCcCCHHHhhCC
Q 011138 350 VEIIKILGTPTREEIKCMNPNYTEFKFPQIKAHPWHKIFHKRMPPEALDLVSRLLQYSPSLRCTALEACAH 420 (492)
Q Consensus 350 ~~i~~~~g~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~Li~~~L~~dP~~R~t~~e~l~H 420 (492)
..+.+. . .+ ..+..+++++.+|+.+||+.||.+||++.++++|
T Consensus 237 ~~i~~~--~-----------------~~---------~~~~~~~~~~~~l~~~c~~~~p~~Rp~~~~i~~~ 279 (283)
T cd05048 237 EMIRSR--Q-----------------LL---------PCPEDCPARVYALMIECWNEIPARRPRFKDIHTR 279 (283)
T ss_pred HHHHcC--C-----------------cC---------CCcccCCHHHHHHHHHHccCChhhCcCHHHHHHH
Confidence 433221 0 00 0123578999999999999999999999999864
No 277
>cd06635 STKc_TAO1 Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 1. Serine/threonine kinases (STKs), thousand-and-one amino acids 1 (TAO1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. TAO1 is sometimes referred to as prostate-derived sterile 20-like kinase 2 (PSK2). TAO1 activates the p38 MAPK through direct interaction with and activation of MEK3. TAO1 is highly expressed in the brain and may play a role in neuron
Probab=100.00 E-value=4.4e-39 Score=320.50 Aligned_cols=248 Identities=28% Similarity=0.429 Sum_probs=201.8
Q ss_pred eeEeeeeccCCceEEEEEEEcCCCCEEEEEEeccch-------hhHHHHHHHHHHcCCCCccccceeeeeccCCCceEEE
Q 011138 139 YMAERVVGTGSFGVVFQAKCLETGDSVAIKKVLQDK-------RYKNRELQIMRLLNHPNVVSLKHCFFSTTEKDELYLN 211 (492)
Q Consensus 139 y~~~~~lG~G~fg~Vy~~~~~~~g~~vAiK~~~~~~-------~~~~~E~~il~~l~h~nIv~l~~~~~~~~~~~~~~~~ 211 (492)
|...+.||+|+||.||++++..+|..||+|.+.... ....+|+++++.++|||++++++++. +....+
T Consensus 27 f~~~~~lg~G~~~~v~~~~~~~~~~~valK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~-----~~~~~~ 101 (317)
T cd06635 27 FTDLREIGHGSFGAVYFARDVRTNEVVAIKKMSYSGKQSNEKWQDIIKEVKFLQRIKHPNSIEYKGCYL-----REHTAW 101 (317)
T ss_pred hhhhheeccCCCeEEEEEEEcCCCcEEEEEEEecCCCCchHHHHHHHHHHHHHHhCCCCCEEEEEEEEe-----eCCeEE
Confidence 788889999999999999999999999999885321 23457999999999999999999884 334578
Q ss_pred EEeeechhhHHHHhhhhhhcCCCcCHHHHHHHHHHHHHHHHHHHhhCCcccCCCCCCceEEcCCCCcEEEeeecCccccC
Q 011138 212 LVLEYISETVYRVSKHYTRMNQHVPILYVQLYTYQICRALNYLHHVVGVCHRDIKPQNLLVNPHTHQLKICDFGSAKMLV 291 (492)
Q Consensus 212 lV~E~~~~~l~~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~yLH~~~givHrDlKp~NILl~~~~~~vkL~DFG~a~~~~ 291 (492)
+||||+.|.+++.+.. ....+++..+..++.||+.||.|||+ +||+||||+|+||+++.++ .+||+|||++....
T Consensus 102 lv~e~~~g~l~~~~~~---~~~~l~~~~~~~i~~~i~~~l~~lH~-~~i~H~dL~p~Nil~~~~~-~~kl~dfg~~~~~~ 176 (317)
T cd06635 102 LVMEYCLGSASDLLEV---HKKPLQEVEIAAITHGALQGLAYLHS-HNMIHRDIKAGNILLTEPG-QVKLADFGSASIAS 176 (317)
T ss_pred EEEeCCCCCHHHHHHH---hcCCCCHHHHHHHHHHHHHHHHHHHH-CCcccCCCCcccEEECCCC-CEEEecCCCccccC
Confidence 9999999877665432 23558889999999999999999997 9999999999999999877 79999999986543
Q ss_pred CCCCCccceeccCccCchhhcC--CCCCCcchhhHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCCHHHHhhcCC
Q 011138 292 PGEPNISYICSRYYRAPELIFG--ATEYTTAIDMWSIGCVLAELLLGQPLFPGESGVDQLVEIIKILGTPTREEIKCMNP 369 (492)
Q Consensus 292 ~~~~~~~~~gt~~y~aPE~~~~--~~~~~~~~DvwSlGvil~ell~G~~pf~~~~~~~~~~~i~~~~g~p~~~~~~~~~~ 369 (492)
. .....|++.|+|||.+.+ ...++.++|||||||++|+|++|.+||...+....+..+......
T Consensus 177 ~---~~~~~~~~~y~aPE~~~~~~~~~~~~~~Dv~slGvil~el~~g~~p~~~~~~~~~~~~~~~~~~~----------- 242 (317)
T cd06635 177 P---ANSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNAMSALYHIAQNESP----------- 242 (317)
T ss_pred C---cccccCCccccChhhhhcCCCCCCCccccHHHHHHHHHHHHhCCCCCCCccHHHHHHHHHhccCC-----------
Confidence 2 234578899999999842 344788999999999999999999999887665555554431100
Q ss_pred CCcccCCCcccCCCcccccCCCCChhHhhhhccccccCCCCcCCHHHhhCCCCCCCC
Q 011138 370 NYTEFKFPQIKAHPWHKIFHKRMPPEALDLVSRLLQYSPSLRCTALEACAHPFFDDL 426 (492)
Q Consensus 370 ~~~~~~~~~~~~~~~~~~~~~~~s~~~~~Li~~~L~~dP~~R~t~~e~l~Hp~f~~~ 426 (492)
. .....+++.+++||.+||+.+|.+||++.++++|+|+...
T Consensus 243 --------~--------~~~~~~~~~l~~li~~~l~~~p~~Rpt~~~il~~~~~~~~ 283 (317)
T cd06635 243 --------T--------LQSNEWSDYFRNFVDSCLQKIPQDRPTSEELLKHMFVLRE 283 (317)
T ss_pred --------C--------CCCccccHHHHHHHHHHccCCcccCcCHHHHHhChhhhcc
Confidence 0 0012357889999999999999999999999999999753
No 278
>PLN03225 Serine/threonine-protein kinase SNT7; Provisional
Probab=100.00 E-value=4.9e-39 Score=341.16 Aligned_cols=281 Identities=22% Similarity=0.297 Sum_probs=185.0
Q ss_pred cccceeEeeeeccCCceEEEEEEEcCC----CCEEEEEEeccchhhHHHHHHH---HHHcCCCCccccceeeeeccC-CC
Q 011138 135 QTISYMAERVVGTGSFGVVFQAKCLET----GDSVAIKKVLQDKRYKNRELQI---MRLLNHPNVVSLKHCFFSTTE-KD 206 (492)
Q Consensus 135 ~~~~y~~~~~lG~G~fg~Vy~~~~~~~----g~~vAiK~~~~~~~~~~~E~~i---l~~l~h~nIv~l~~~~~~~~~-~~ 206 (492)
...+|.+.+.||+|+||.||+|.+..+ +..||||++..... .|..+ ++...+.+++.++..|..... ..
T Consensus 130 ~~~~y~l~~~LG~G~FG~VYka~~~~~~~~~~~~vAvK~~~~~~~---~e~~~~e~l~~~~~~~~~~~~~~~~~~~~~~~ 206 (566)
T PLN03225 130 KKDDFVLGKKLGEGAFGVVYKASLVNKQSKKEGKYVLKKATEYGA---VEIWMNERVRRACPNSCADFVYGFLEPVSSKK 206 (566)
T ss_pred ccCCeEEeEEEeeCCCeEEEEEEEcCCccccCcEEEEEEecccch---hHHHHHHHHHhhchhhHHHHHHhhhccccccc
Confidence 446799999999999999999999988 99999998754322 22222 223334444444443322211 33
Q ss_pred ceEEEEEeeechhh-HHHHhhhhhh----------------cCCCcCHHHHHHHHHHHHHHHHHHHhhCCcccCCCCCCc
Q 011138 207 ELYLNLVLEYISET-VYRVSKHYTR----------------MNQHVPILYVQLYTYQICRALNYLHHVVGVCHRDIKPQN 269 (492)
Q Consensus 207 ~~~~~lV~E~~~~~-l~~~~~~~~~----------------~~~~~~~~~~~~i~~qi~~aL~yLH~~~givHrDlKp~N 269 (492)
...++|||||++++ +.+++..... .........+..++.||+.||.|||+ +||+||||||+|
T Consensus 207 ~~~~~LV~ey~~~gsL~~~l~~~~~~~~v~~~l~~~~~~l~~~~~r~~~~i~~i~~qll~aL~yLH~-~gIiHRDLKP~N 285 (566)
T PLN03225 207 EDEYWLVWRYEGESTLADLMQSKEFPYNVEPYLLGKVQDLPKGLERENKIIQTIMRQILFALDGLHS-TGIVHRDVKPQN 285 (566)
T ss_pred CCceEEEEEecCCCcHHHHHHhcCCchhHHHHhccchhhccccchhhHHHHHHHHHHHHHHHHHHHH-CCEEeCcCCHHH
Confidence 44578999999865 4444322100 00111234466799999999999997 999999999999
Q ss_pred eEEcCCCCcEEEeeecCccccCCCC--CCccceeccCccCchhhcCCC---------------------CCCcchhhHHH
Q 011138 270 LLVNPHTHQLKICDFGSAKMLVPGE--PNISYICSRYYRAPELIFGAT---------------------EYTTAIDMWSI 326 (492)
Q Consensus 270 ILl~~~~~~vkL~DFG~a~~~~~~~--~~~~~~gt~~y~aPE~~~~~~---------------------~~~~~~DvwSl 326 (492)
||++.+...+||+|||+|+.+..+. .....++|+.|+|||.+.... .++.++|||||
T Consensus 286 ILl~~~~~~~KL~DFGlA~~l~~~~~~~~~~~~~t~~Y~APE~~~~~~~~~~~~~~~~~~~~sp~l~~~~~~~k~DVwSl 365 (566)
T PLN03225 286 IIFSEGSGSFKIIDLGAAADLRVGINYIPKEFLLDPRYAAPEQYIMSTQTPSAPSAPVATALSPVLWQLNLPDRFDIYSA 365 (566)
T ss_pred EEEeCCCCcEEEEeCCCccccccccccCCcccccCCCccChHHhhccCCCCCCccccccccccchhccccCCCCcccHHH
Confidence 9998654489999999997653322 234568899999999763221 24456799999
Q ss_pred HHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCCHHHHhhcCCCCcccCCCcccCCCcccccCCCCChhHhhhhcccccc
Q 011138 327 GCVLAELLLGQPLFPGESGVDQLVEIIKILGTPTREEIKCMNPNYTEFKFPQIKAHPWHKIFHKRMPPEALDLVSRLLQY 406 (492)
Q Consensus 327 Gvil~ell~G~~pf~~~~~~~~~~~i~~~~g~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~Li~~~L~~ 406 (492)
||+||||+++..+ ..+....+..++...+...........+.. .+.... ... .......++.+||.+||++
T Consensus 366 GviL~el~~~~~~--~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~----~~~~~~--~~~-~~d~~~~~~~dLi~~mL~~ 436 (566)
T PLN03225 366 GLIFLQMAFPNLR--SDSNLIQFNRQLKRNDYDLVAWRKLVEPRA----SPDLRR--GFE-VLDLDGGAGWELLKSMMRF 436 (566)
T ss_pred HHHHHHHHhCcCC--CchHHHHHHHHHHhcCCcHHHHHHhhcccc----chhhhh--hhh-hccccchHHHHHHHHHccC
Confidence 9999999997654 344455555555544443222211111110 000000 000 0112345677999999999
Q ss_pred CCCCcCCHHHhhCCCCCCCCCC
Q 011138 407 SPSLRCTALEACAHPFFDDLRD 428 (492)
Q Consensus 407 dP~~R~t~~e~l~Hp~f~~~~~ 428 (492)
||++|||+.|+|+||||+....
T Consensus 437 dP~kR~ta~e~L~Hpff~~~~~ 458 (566)
T PLN03225 437 KGRQRISAKAALAHPYFDREGL 458 (566)
T ss_pred CcccCCCHHHHhCCcCcCCCCc
Confidence 9999999999999999987543
No 279
>cd05122 PKc_STE Catalytic domain of STE family Protein Kinases. Protein Kinases (PKs), STE family, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The STE family is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases (STKs), protein tyrosine kinases (PTKs), RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). This family is composed of STKs, and some dual-specificity PKs that phosphorylate both threonine and tyrosine residues of target proteins. Most members are kinases involved in mitogen-activated protein kinase (MAPK) signaling cascades, acting as MAPK kinases (MAPKKs), MAPK kinase kinases (MAPKKKs), or MAPK kinase kinase kinases (MAP4Ks). The MAPK signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core
Probab=100.00 E-value=1.1e-38 Score=305.10 Aligned_cols=248 Identities=29% Similarity=0.483 Sum_probs=200.6
Q ss_pred ceeEeeeeccCCceEEEEEEEcCCCCEEEEEEeccch----hhHHHHHHHHHHcCCCCccccceeeeeccCCCceEEEEE
Q 011138 138 SYMAERVVGTGSFGVVFQAKCLETGDSVAIKKVLQDK----RYKNRELQIMRLLNHPNVVSLKHCFFSTTEKDELYLNLV 213 (492)
Q Consensus 138 ~y~~~~~lG~G~fg~Vy~~~~~~~g~~vAiK~~~~~~----~~~~~E~~il~~l~h~nIv~l~~~~~~~~~~~~~~~~lV 213 (492)
.|.+.+.||+|+||.||++.+..+++.+++|++.... ....+|+.+++.++|+||+++++++. .....+++
T Consensus 1 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~-----~~~~~~l~ 75 (253)
T cd05122 1 LFEILEKIGKGGFGEVYKARHKRTGKEVAIKVIKLESKEKKEKIINEIQILKKCKHPNIVKYYGSYL-----KKDELWIV 75 (253)
T ss_pred CceeeeeeccCCceEEEEEEECCCCcEEEEEEecccchhHHHHHHHHHHHHHhCCCCCEeEEEEEEe-----cCCeEEEE
Confidence 3888899999999999999999899999999885543 34568999999999999999999883 33458899
Q ss_pred eeechhh-HHHHhhhhhhcCCCcCHHHHHHHHHHHHHHHHHHHhhCCcccCCCCCCceEEcCCCCcEEEeeecCccccCC
Q 011138 214 LEYISET-VYRVSKHYTRMNQHVPILYVQLYTYQICRALNYLHHVVGVCHRDIKPQNLLVNPHTHQLKICDFGSAKMLVP 292 (492)
Q Consensus 214 ~E~~~~~-l~~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~yLH~~~givHrDlKp~NILl~~~~~~vkL~DFG~a~~~~~ 292 (492)
+||+++. +.+.+.. ....+++..+..++.|++.||.|||+ +|++||||+|+||+++.++ .++|+|||.+.....
T Consensus 76 ~e~~~~~~L~~~~~~---~~~~~~~~~~~~i~~~i~~~l~~lh~-~~i~h~dl~p~ni~i~~~~-~~~l~d~~~~~~~~~ 150 (253)
T cd05122 76 MEFCSGGSLKDLLKS---TNQTLTESQIAYVCKELLKGLEYLHS-NGIIHRDIKAANILLTSDG-EVKLIDFGLSAQLSD 150 (253)
T ss_pred EecCCCCcHHHHHhh---cCCCCCHHHHHHHHHHHHHHHHHhhc-CCEecCCCCHHHEEEccCC-eEEEeeccccccccc
Confidence 9999954 4333322 22568999999999999999999997 9999999999999999877 799999999987654
Q ss_pred CCCCccceeccCccCchhhcCCCCCCcchhhHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCCHHHHhhcCCCCc
Q 011138 293 GEPNISYICSRYYRAPELIFGATEYTTAIDMWSIGCVLAELLLGQPLFPGESGVDQLVEIIKILGTPTREEIKCMNPNYT 372 (492)
Q Consensus 293 ~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DvwSlGvil~ell~G~~pf~~~~~~~~~~~i~~~~g~p~~~~~~~~~~~~~ 372 (492)
........++..|+|||.+.+.. ++.++|+|||||++|+|++|..||...+....+..+.. ..
T Consensus 151 ~~~~~~~~~~~~~~~PE~~~~~~-~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~~~~~~~-~~--------------- 213 (253)
T cd05122 151 TKARNTMVGTPYWMAPEVINGKP-YDYKADIWSLGITAIELAEGKPPYSELPPMKALFKIAT-NG--------------- 213 (253)
T ss_pred cccccceecCCcccCHHHHcCCC-CCccccHHHHHHHHHHHHhCCCCCCCCchHHHHHHHHh-cC---------------
Confidence 44344567899999999986554 88999999999999999999999987754444433322 00
Q ss_pred ccCCCcccCCCcccccCCCCChhHhhhhccccccCCCCcCCHHHhhCCCC
Q 011138 373 EFKFPQIKAHPWHKIFHKRMPPEALDLVSRLLQYSPSLRCTALEACAHPF 422 (492)
Q Consensus 373 ~~~~~~~~~~~~~~~~~~~~s~~~~~Li~~~L~~dP~~R~t~~e~l~Hp~ 422 (492)
.+... ....++..+.++|.+||+.||++|||+.+++.|||
T Consensus 214 ---~~~~~-------~~~~~~~~~~~~i~~~l~~~p~~R~t~~~~l~~~~ 253 (253)
T cd05122 214 ---PPGLR-------NPEKWSDEFKDFLKKCLQKNPEKRPTAEQLLKHPF 253 (253)
T ss_pred ---CCCcC-------cccccCHHHHHHHHHHccCChhhCCCHHHHhcCCC
Confidence 00000 01124788999999999999999999999999999
No 280
>cd05088 PTKc_Tie2 Catalytic domain of the Protein Tyrosine Kinase, Tie2. Protein Tyrosine Kinase (PTK) family; Tie2; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie2 is a receptor tyr kinase (RTK) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie2 is expressed mainly in endothelial cells and hematopoietic stem cells. It is also found in a subset of tumor-associated monocytes and eosinophils. The angiopoietins (Ang-1 to Ang-4) serve as ligands for Tie2. The binding of A
Probab=100.00 E-value=3e-39 Score=319.62 Aligned_cols=250 Identities=22% Similarity=0.314 Sum_probs=191.3
Q ss_pred cccceeEeeeeccCCceEEEEEEEcCCCCE--EEEEEeccc-----hhhHHHHHHHHHHc-CCCCccccceeeeeccCCC
Q 011138 135 QTISYMAERVVGTGSFGVVFQAKCLETGDS--VAIKKVLQD-----KRYKNRELQIMRLL-NHPNVVSLKHCFFSTTEKD 206 (492)
Q Consensus 135 ~~~~y~~~~~lG~G~fg~Vy~~~~~~~g~~--vAiK~~~~~-----~~~~~~E~~il~~l-~h~nIv~l~~~~~~~~~~~ 206 (492)
...+|.+.+.||+|+||.||+|.+..+|.. +|+|.+... .....+|+.++.++ +|+||+++++++ ..
T Consensus 5 ~~~~~~~~~~lg~G~~g~V~~a~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~Ei~~l~~l~~h~~iv~~~~~~-----~~ 79 (303)
T cd05088 5 EWNDIKFQDVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGHHPNIINLLGAC-----EH 79 (303)
T ss_pred chhhceeeeeecCCCCceEEEEEEccCCceeeEEEEEecccCCHHHHHHHHHHHHHHHHhcCCCCcceEEEEE-----CC
Confidence 345799999999999999999998888765 577766432 12345799999999 899999999988 44
Q ss_pred ceEEEEEeeechh-hHHHHhhhhhh------------cCCCcCHHHHHHHHHHHHHHHHHHHhhCCcccCCCCCCceEEc
Q 011138 207 ELYLNLVLEYISE-TVYRVSKHYTR------------MNQHVPILYVQLYTYQICRALNYLHHVVGVCHRDIKPQNLLVN 273 (492)
Q Consensus 207 ~~~~~lV~E~~~~-~l~~~~~~~~~------------~~~~~~~~~~~~i~~qi~~aL~yLH~~~givHrDlKp~NILl~ 273 (492)
..++|+||||+++ .+...+..... ....+++..++.++.||+.||+|||+ +||+||||||+|||++
T Consensus 80 ~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~al~~LH~-~gi~H~dlkp~Nili~ 158 (303)
T cd05088 80 RGYLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAADVARGMDYLSQ-KQFIHRDLAARNILVG 158 (303)
T ss_pred CCCceEEEEeCCCCcHHHHHHhcccccccccccccccccCcCCHHHHHHHHHHHHHHHHHHHh-CCccccccchheEEec
Confidence 4568999999985 45554432211 12357888999999999999999997 9999999999999999
Q ss_pred CCCCcEEEeeecCccccCCCCCCccceeccCccCchhhcCCCCCCcchhhHHHHHHHHHHHh-CCCCCCCCChHHHHHHH
Q 011138 274 PHTHQLKICDFGSAKMLVPGEPNISYICSRYYRAPELIFGATEYTTAIDMWSIGCVLAELLL-GQPLFPGESGVDQLVEI 352 (492)
Q Consensus 274 ~~~~~vkL~DFG~a~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DvwSlGvil~ell~-G~~pf~~~~~~~~~~~i 352 (492)
.++ .+||+|||++.............++..|+|||.+.+. .++.++|||||||++|+|++ |.+||.+.+..+....+
T Consensus 159 ~~~-~~kl~dfg~~~~~~~~~~~~~~~~~~~y~aPE~~~~~-~~~~~~Di~slG~il~ellt~g~~p~~~~~~~~~~~~~ 236 (303)
T cd05088 159 ENY-VAKIADFGLSRGQEVYVKKTMGRLPVRWMAIESLNYS-VYTTNSDVWSYGVLLWEIVSLGGTPYCGMTCAELYEKL 236 (303)
T ss_pred CCC-cEEeCccccCcccchhhhcccCCCcccccCHHHHhcc-CCcccccchhhhhHHHHHHhcCCCCcccCChHHHHHHH
Confidence 887 7999999998643211112222346679999988554 48899999999999999998 99999876654433322
Q ss_pred HHHhCCCCHHHHhhcCCCCcccCCCcccCCCcccccCCCCChhHhhhhccccccCCCCcCCHHHhhCC
Q 011138 353 IKILGTPTREEIKCMNPNYTEFKFPQIKAHPWHKIFHKRMPPEALDLVSRLLQYSPSLRCTALEACAH 420 (492)
Q Consensus 353 ~~~~g~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~Li~~~L~~dP~~R~t~~e~l~H 420 (492)
.. .... ..+..+++++.+||.+||+.||++||++.+++.+
T Consensus 237 ~~------------------~~~~----------~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~il~~ 276 (303)
T cd05088 237 PQ------------------GYRL----------EKPLNCDDEVYDLMRQCWREKPYERPSFAQILVS 276 (303)
T ss_pred hc------------------CCcC----------CCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHH
Confidence 11 0000 0112467899999999999999999999999875
No 281
>cd05035 PTKc_Axl_like Catalytic Domain of Axl-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Axl subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). The Axl subfamily consists of Axl, Tyro3 (or Sky), Mer (or Mertk), and similar proteins. PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Axl subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Axl subfamily members are implicated in a variety of cellu
Probab=100.00 E-value=4.4e-39 Score=312.61 Aligned_cols=251 Identities=20% Similarity=0.282 Sum_probs=192.6
Q ss_pred eeEeeeeccCCceEEEEEEEcCC---CCEEEEEEeccch------hhHHHHHHHHHHcCCCCccccceeeeeccC-CCce
Q 011138 139 YMAERVVGTGSFGVVFQAKCLET---GDSVAIKKVLQDK------RYKNRELQIMRLLNHPNVVSLKHCFFSTTE-KDEL 208 (492)
Q Consensus 139 y~~~~~lG~G~fg~Vy~~~~~~~---g~~vAiK~~~~~~------~~~~~E~~il~~l~h~nIv~l~~~~~~~~~-~~~~ 208 (492)
|.+++.||+|+||.||+|....+ +..||||.+..+. ....+|+.+++.++||||+++++++..... .+..
T Consensus 1 ~~~~~~lg~G~~g~v~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~~ 80 (273)
T cd05035 1 LKLGKILGEGEFGSVMEGQLSQDDGSQLKVAVKTMKLDIHTYSEIEEFLSEAACMKDFDHPNVMKLIGVCFEASSLQKIP 80 (273)
T ss_pred CccccccCcCCCceEEEEEEecCCCCcceEEEEEeccCcCCHHHHHHHHHHHHHHHhCCCCCeeeEEeeeccCCccccCc
Confidence 56788999999999999987653 4789999886432 234579999999999999999998755443 3344
Q ss_pred EEEEEeeechhh-HHHHhhhhh--hcCCCcCHHHHHHHHHHHHHHHHHHHhhCCcccCCCCCCceEEcCCCCcEEEeeec
Q 011138 209 YLNLVLEYISET-VYRVSKHYT--RMNQHVPILYVQLYTYQICRALNYLHHVVGVCHRDIKPQNLLVNPHTHQLKICDFG 285 (492)
Q Consensus 209 ~~~lV~E~~~~~-l~~~~~~~~--~~~~~~~~~~~~~i~~qi~~aL~yLH~~~givHrDlKp~NILl~~~~~~vkL~DFG 285 (492)
+.++||||+.++ +...+.... .....+++..+..++.||+.||.|||+ .||+||||||+||+++.++ .+||+|||
T Consensus 81 ~~~~v~e~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~aL~~lH~-~~i~H~dlkp~Nil~~~~~-~~kl~dfg 158 (273)
T cd05035 81 KPMVILPFMKHGDLHSFLLYSRLGGLPEKLPLQTLLKFMVDIALGMEYLSN-RNFIHRDLAARNCMLREDM-TVCVADFG 158 (273)
T ss_pred ccEEEEeccCCCCHHHHHHHhhccCCcccCCHHHHHHHHHHHHHHHHHHHh-CCeeccccchheEEECCCC-eEEECCcc
Confidence 578999999864 333332211 123468899999999999999999997 9999999999999999887 79999999
Q ss_pred CccccCCCCCC---ccceeccCccCchhhcCCCCCCcchhhHHHHHHHHHHHh-CCCCCCCCChHHHHHHHHHHhCCCCH
Q 011138 286 SAKMLVPGEPN---ISYICSRYYRAPELIFGATEYTTAIDMWSIGCVLAELLL-GQPLFPGESGVDQLVEIIKILGTPTR 361 (492)
Q Consensus 286 ~a~~~~~~~~~---~~~~gt~~y~aPE~~~~~~~~~~~~DvwSlGvil~ell~-G~~pf~~~~~~~~~~~i~~~~g~p~~ 361 (492)
+++........ ....++..|+|||.+.+ ..++.++|||||||++|||++ |.+||.+....+.+..+... .
T Consensus 159 ~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~-~~~~~~~Dv~SlG~il~el~~~g~~p~~~~~~~~~~~~~~~~--~--- 232 (273)
T cd05035 159 LSKKIYSGDYYRQGRIAKMPVKWIAIESLAD-RVYTSKSDVWAFGVTMWEIATRGQTPYPGVENHEIYDYLRHG--N--- 232 (273)
T ss_pred ceeeccccccccccccccCCccccCHhhccc-CCCCcccchHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHcC--C---
Confidence 99865433211 12234678999999854 458999999999999999999 99999887665544333220 0
Q ss_pred HHHhhcCCCCcccCCCcccCCCcccccCCCCChhHhhhhccccccCCCCcCCHHHhhCC
Q 011138 362 EEIKCMNPNYTEFKFPQIKAHPWHKIFHKRMPPEALDLVSRLLQYSPSLRCTALEACAH 420 (492)
Q Consensus 362 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~Li~~~L~~dP~~R~t~~e~l~H 420 (492)
... .+..+++++.++|.+||+.||.+|||+.+++.+
T Consensus 233 -----------~~~------------~~~~~~~~~~~li~~~l~~~p~~Rp~~~e~~~~ 268 (273)
T cd05035 233 -----------RLK------------QPEDCLDELYDLMYSCWRADPKDRPTFTKLREV 268 (273)
T ss_pred -----------CCC------------CCcCCCHHHHHHHHHHcCCChhhCcCHHHHHHH
Confidence 000 123468899999999999999999999999763
No 282
>cd08222 STKc_Nek11 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 11. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 11 (Nek11) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek11 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek11 is involved, through direct phosphorylation, in regulating the degradation of Cdc25A (Cell Division Cycle 25 homolog A), which plays a role in cell cycle progression and in activating cyclin dependent kinases. Nek11 is activated by CHK1 (CHeckpoint Kinase 1) and may be involved in the G2/M check
Probab=100.00 E-value=4.8e-39 Score=310.53 Aligned_cols=249 Identities=24% Similarity=0.457 Sum_probs=196.6
Q ss_pred ceeEeeeeccCCceEEEEEEEcCCCCEEEEEEecc---------chhhHHHHHHHHHHcCCCCccccceeeeeccCCCce
Q 011138 138 SYMAERVVGTGSFGVVFQAKCLETGDSVAIKKVLQ---------DKRYKNRELQIMRLLNHPNVVSLKHCFFSTTEKDEL 208 (492)
Q Consensus 138 ~y~~~~~lG~G~fg~Vy~~~~~~~g~~vAiK~~~~---------~~~~~~~E~~il~~l~h~nIv~l~~~~~~~~~~~~~ 208 (492)
+|.+.+.||+|+||.||++.+..++..+++|.+.. ......+|+.+++.++||||+++++++ .+..
T Consensus 1 ~y~i~~~ig~g~~g~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~-----~~~~ 75 (260)
T cd08222 1 RYILQQRLGKGSFGTVYLVKDKKAVAEERLKVLKEIPVGELNPNETVQANQEAQLLSKLDHPAIVKFHASF-----LERD 75 (260)
T ss_pred CceeeeeecCCCCceEEEEEecCCCCcceEEEeccccccccCcchHHHHHHHHHHHHhCCCCcHHHHHHHH-----hcCC
Confidence 48899999999999999999988877777776532 112344688999999999999999988 3344
Q ss_pred EEEEEeeechhh-HHHHhhhhhhcCCCcCHHHHHHHHHHHHHHHHHHHhhCCcccCCCCCCceEEcCCCCcEEEeeecCc
Q 011138 209 YLNLVLEYISET-VYRVSKHYTRMNQHVPILYVQLYTYQICRALNYLHHVVGVCHRDIKPQNLLVNPHTHQLKICDFGSA 287 (492)
Q Consensus 209 ~~~lV~E~~~~~-l~~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~yLH~~~givHrDlKp~NILl~~~~~~vkL~DFG~a 287 (492)
..++||||+.++ +...+.........+++..++.++.|++.||.|||+ .|++|+||||+||+++. + .+||+|||++
T Consensus 76 ~~~lv~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH~-~~i~h~~l~~~nili~~-~-~~~l~d~g~~ 152 (260)
T cd08222 76 AFCIITEYCEGRDLDCKLEELKHTGKTLSENQVCEWFIQLLLGVHYMHQ-RRILHRDLKAKNIFLKN-N-LLKIGDFGVS 152 (260)
T ss_pred ceEEEEEeCCCCCHHHHHHHHhhcccccCHHHHHHHHHHHHHHHHHHHH-cCccccCCChhheEeec-C-CEeecccCce
Confidence 588999999864 444444333445678999999999999999999997 99999999999999985 3 5999999998
Q ss_pred cccCCCC-CCccceeccCccCchhhcCCCCCCcchhhHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCCHHHHhh
Q 011138 288 KMLVPGE-PNISYICSRYYRAPELIFGATEYTTAIDMWSIGCVLAELLLGQPLFPGESGVDQLVEIIKILGTPTREEIKC 366 (492)
Q Consensus 288 ~~~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~~~~DvwSlGvil~ell~G~~pf~~~~~~~~~~~i~~~~g~p~~~~~~~ 366 (492)
....... ......|++.|+|||.+.+. .++.++|+||||+++|+|++|..||...+.......+.. +.
T Consensus 153 ~~~~~~~~~~~~~~~~~~~~~pe~~~~~-~~~~~~Dv~slG~~~~~l~~~~~~~~~~~~~~~~~~~~~--~~-------- 221 (260)
T cd08222 153 RLLMGSCDLATTFTGTPYYMSPEALKHQ-GYDSKSDIWSLGCILYEMCCLAHAFEGQNFLSVVLRIVE--GP-------- 221 (260)
T ss_pred eecCCCcccccCCCCCcCccCHHHHccC-CCCchhhHHHHHHHHHHHHhCCCCCCCccHHHHHHHHHc--CC--------
Confidence 7654332 22345678999999998554 478899999999999999999999977655444433321 00
Q ss_pred cCCCCcccCCCcccCCCcccccCCCCChhHhhhhccccccCCCCcCCHHHhhCCCCC
Q 011138 367 MNPNYTEFKFPQIKAHPWHKIFHKRMPPEALDLVSRLLQYSPSLRCTALEACAHPFF 423 (492)
Q Consensus 367 ~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~Li~~~L~~dP~~R~t~~e~l~Hp~f 423 (492)
.+. ++..++.++.++|.+||..||++||++.++++||||
T Consensus 222 ---------~~~---------~~~~~~~~~~~li~~~l~~~p~~Rp~~~~il~~~~~ 260 (260)
T cd08222 222 ---------TPS---------LPETYSRQLNSIMQSMLNKDPSLRPSAAEILRNPFI 260 (260)
T ss_pred ---------CCC---------CcchhcHHHHHHHHHHhcCChhhCcCHHHHhhCCCC
Confidence 000 123568899999999999999999999999999997
No 283
>cd06606 STKc_MAPKKK Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-Activated Protein Kinase Kinase Kinase. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKKKs (MKKKs or MAP3Ks) are also called MAP/ERK kinase kinases (MEKKs) in some cases. They phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. This subfamily is composed of the Apoptosis Signal-regulating Kinases ASK1 (or MAPKK
Probab=100.00 E-value=1.1e-38 Score=306.30 Aligned_cols=250 Identities=34% Similarity=0.495 Sum_probs=200.0
Q ss_pred ceeEeeeeccCCceEEEEEEEcCCCCEEEEEEeccch------hhHHHHHHHHHHcCCCCccccceeeeeccCCCceEEE
Q 011138 138 SYMAERVVGTGSFGVVFQAKCLETGDSVAIKKVLQDK------RYKNRELQIMRLLNHPNVVSLKHCFFSTTEKDELYLN 211 (492)
Q Consensus 138 ~y~~~~~lG~G~fg~Vy~~~~~~~g~~vAiK~~~~~~------~~~~~E~~il~~l~h~nIv~l~~~~~~~~~~~~~~~~ 211 (492)
+|.+.+.||+|++|.||+|.+..++..|++|.+.... ....+|+.++++++|+||+++++++.... ...++
T Consensus 1 ~~~~~~~i~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~---~~~~~ 77 (260)
T cd06606 1 EWTRGELLGRGSFGSVYLALDKDTGELMAVKSVELSGDSEEELEALEREIRILSSLQHPNIVRYYGSERDEE---KNTLN 77 (260)
T ss_pred CceeeeEeeecCceEEEEEEECCCCcEEEEEEeeccccchHHHHHHHHHHHHHHHcCCCCEeeEEEEEecCC---CCeEE
Confidence 3788899999999999999999999999999885443 34567999999999999999999884321 25688
Q ss_pred EEeeechhh-HHHHhhhhhhcCCCcCHHHHHHHHHHHHHHHHHHHhhCCcccCCCCCCceEEcCCCCcEEEeeecCcccc
Q 011138 212 LVLEYISET-VYRVSKHYTRMNQHVPILYVQLYTYQICRALNYLHHVVGVCHRDIKPQNLLVNPHTHQLKICDFGSAKML 290 (492)
Q Consensus 212 lV~E~~~~~-l~~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~yLH~~~givHrDlKp~NILl~~~~~~vkL~DFG~a~~~ 290 (492)
+|+||+.++ +.+.+.. ...+++..+..++.|++.||.|||+ .|++|+||+|+||+++.++ .++|+|||.+...
T Consensus 78 lv~e~~~~~~L~~~~~~----~~~~~~~~~~~~~~~l~~~l~~lh~-~~~~h~dl~p~ni~i~~~~-~~~l~d~~~~~~~ 151 (260)
T cd06606 78 IFLEYVSGGSLSSLLKK----FGKLPEPVIRKYTRQILEGLAYLHS-NGIVHRDIKGANILVDSDG-VVKLADFGCAKRL 151 (260)
T ss_pred EEEEecCCCcHHHHHHH----cCCCCHHHHHHHHHHHHHHHHHHHH-CCccccCCCHHHEEEcCCC-CEEEcccccEEec
Confidence 999999654 4443322 2378899999999999999999998 9999999999999999877 7999999999876
Q ss_pred CCCCC---CccceeccCccCchhhcCCCCCCcchhhHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCCHHHHhhc
Q 011138 291 VPGEP---NISYICSRYYRAPELIFGATEYTTAIDMWSIGCVLAELLLGQPLFPGESGVDQLVEIIKILGTPTREEIKCM 367 (492)
Q Consensus 291 ~~~~~---~~~~~gt~~y~aPE~~~~~~~~~~~~DvwSlGvil~ell~G~~pf~~~~~~~~~~~i~~~~g~p~~~~~~~~ 367 (492)
..... .....++..|+|||.+.+.. ++.++|||||||++|+|++|..||....... ..+.....
T Consensus 152 ~~~~~~~~~~~~~~~~~y~~pE~~~~~~-~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~--~~~~~~~~---------- 218 (260)
T cd06606 152 GDIETGEGTGSVRGTPYWMAPEVIRGEE-YGRAADIWSLGCTVIEMATGKPPWSELGNPM--AALYKIGS---------- 218 (260)
T ss_pred ccccccccccCCCCCccccCHhhhcCCC-CCchhhHHHHHHHHHHHHhCCCCCCCCCchH--HHHHhccc----------
Confidence 55443 34567889999999986544 8999999999999999999999998766221 11111100
Q ss_pred CCCCcccCCCcccCCCcccccCCCCChhHhhhhccccccCCCCcCCHHHhhCCCCC
Q 011138 368 NPNYTEFKFPQIKAHPWHKIFHKRMPPEALDLVSRLLQYSPSLRCTALEACAHPFF 423 (492)
Q Consensus 368 ~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~Li~~~L~~dP~~R~t~~e~l~Hp~f 423 (492)
.... ..++..++.++.+||.+||+.||.+||++.++++||||
T Consensus 219 -----~~~~---------~~~~~~~~~~l~~~i~~~l~~~p~~Rp~~~~ll~~~~~ 260 (260)
T cd06606 219 -----SGEP---------PEIPEHLSEEAKDFLRKCLRRDPKKRPTADELLQHPFL 260 (260)
T ss_pred -----cCCC---------cCCCcccCHHHHHHHHHhCcCChhhCCCHHHHhhCCCC
Confidence 0000 11234568899999999999999999999999999997
No 284
>cd05062 PTKc_IGF-1R Catalytic domain of the Protein Tyrosine Kinase, Insulin-like Growth Factor-1 Receptor. Protein Tyrosine Kinase (PTK) family; Insulin-like Growth Factor-1 Receptor (IGF-1R); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. IGF-1R is a receptor tyr kinases (RTK) that is composed of two alphabeta heterodimers. Binding of the ligand (IGF-1 or IGF-2) to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, which stimulates downstream kinase activities and biological function. IGF-1R signaling is important in the differentiation, growth, and survival of normal cells. In cancer cells, wh
Probab=100.00 E-value=5.1e-39 Score=313.53 Aligned_cols=250 Identities=22% Similarity=0.281 Sum_probs=191.2
Q ss_pred cccceeEeeeeccCCceEEEEEEEcC-----CCCEEEEEEeccch-----hhHHHHHHHHHHcCCCCccccceeeeeccC
Q 011138 135 QTISYMAERVVGTGSFGVVFQAKCLE-----TGDSVAIKKVLQDK-----RYKNRELQIMRLLNHPNVVSLKHCFFSTTE 204 (492)
Q Consensus 135 ~~~~y~~~~~lG~G~fg~Vy~~~~~~-----~g~~vAiK~~~~~~-----~~~~~E~~il~~l~h~nIv~l~~~~~~~~~ 204 (492)
...+|++.+.||+|+||.||+|.+.. ++..||||++.... ....+|+.+++.++||||+++++++
T Consensus 4 ~~~~~~~~~~ig~G~~g~v~~~~~~~~~~~~~~~~~aik~~~~~~~~~~~~~~~~e~~~l~~l~~~~iv~~~~~~----- 78 (277)
T cd05062 4 AREKITMSRELGQGSFGMVYEGIAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVVRLLGVV----- 78 (277)
T ss_pred cHHHceeeeeeccccCCeEEEEEeccCCCCCceeEEEEEeccccCCHHHHHHHHHHHHHHHhCCCCCeeeEEEEE-----
Confidence 34569999999999999999998642 45679999875322 2345799999999999999999987
Q ss_pred CCceEEEEEeeechhh-HHHHhhhhhhc------CCCcCHHHHHHHHHHHHHHHHHHHhhCCcccCCCCCCceEEcCCCC
Q 011138 205 KDELYLNLVLEYISET-VYRVSKHYTRM------NQHVPILYVQLYTYQICRALNYLHHVVGVCHRDIKPQNLLVNPHTH 277 (492)
Q Consensus 205 ~~~~~~~lV~E~~~~~-l~~~~~~~~~~------~~~~~~~~~~~i~~qi~~aL~yLH~~~givHrDlKp~NILl~~~~~ 277 (492)
......++||||++++ +.+.+...... ...+++..+..++.|++.||.|||+ .|++||||||+|||++.++
T Consensus 79 ~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH~-~~~vH~dlkp~Nil~~~~~- 156 (277)
T cd05062 79 SQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVQAPPSLKKMIQMAGEIADGMAYLNA-NKFVHRDLAARNCMVAEDF- 156 (277)
T ss_pred cCCCCeEEEEecCCCCCHHHHHHHcCccccccccccCCCHHHHHHHHHHHHHHHHHHHH-CCcccCCcchheEEEcCCC-
Confidence 4444688999999864 44443321111 1235677788899999999999997 9999999999999999887
Q ss_pred cEEEeeecCccccCCCCC---CccceeccCccCchhhcCCCCCCcchhhHHHHHHHHHHHh-CCCCCCCCChHHHHHHHH
Q 011138 278 QLKICDFGSAKMLVPGEP---NISYICSRYYRAPELIFGATEYTTAIDMWSIGCVLAELLL-GQPLFPGESGVDQLVEII 353 (492)
Q Consensus 278 ~vkL~DFG~a~~~~~~~~---~~~~~gt~~y~aPE~~~~~~~~~~~~DvwSlGvil~ell~-G~~pf~~~~~~~~~~~i~ 353 (492)
.+||+|||+++....... .....+++.|+|||++.+. .++.++|||||||++|||++ |..||.+.+..+.+..+.
T Consensus 157 ~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~-~~~~~~Di~slG~~l~el~~~~~~p~~~~~~~~~~~~~~ 235 (277)
T cd05062 157 TVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMSPESLKDG-VFTTYSDVWSFGVVLWEIATLAEQPYQGMSNEQVLRFVM 235 (277)
T ss_pred CEEECCCCCccccCCcceeecCCCCccCHhhcChhHhhcC-CcCchhHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHH
Confidence 799999999875533221 1123457789999998654 48999999999999999998 789998876654444332
Q ss_pred HHhCCCCHHHHhhcCCCCcccCCCcccCCCcccccCCCCChhHhhhhccccccCCCCcCCHHHhhCC
Q 011138 354 KILGTPTREEIKCMNPNYTEFKFPQIKAHPWHKIFHKRMPPEALDLVSRLLQYSPSLRCTALEACAH 420 (492)
Q Consensus 354 ~~~g~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~Li~~~L~~dP~~R~t~~e~l~H 420 (492)
.. .++. ++..+++.+.+||.+||+.||++|||+.+++++
T Consensus 236 ~~-------------------~~~~---------~~~~~~~~~~~li~~~l~~~p~~Rps~~e~l~~ 274 (277)
T cd05062 236 EG-------------------GLLD---------KPDNCPDMLFELMRMCWQYNPKMRPSFLEIISS 274 (277)
T ss_pred cC-------------------CcCC---------CCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHH
Confidence 20 0000 123467889999999999999999999999864
No 285
>cd05084 PTKc_Fes Catalytic domain of the Protein Tyrosine Kinase, Fes. Protein Tyrosine Kinase (PTK) family; Fes (or Fps) kinase subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fes subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. The genes for Fes (feline sarcoma) and Fps (Fujinami poultry sarcoma) were first isolated from tumor-causing retroviruses. The viral oncogenes encode chimeric Fes proteins consisting of Gag sequences at the N-termini, resulting in unregulated tyr kinase activity. Fes kinase is expressed in myeloid, vascular
Probab=100.00 E-value=3.2e-39 Score=310.28 Aligned_cols=238 Identities=22% Similarity=0.319 Sum_probs=184.9
Q ss_pred eeeccCCceEEEEEEEcCCCCEEEEEEeccc-----hhhHHHHHHHHHHcCCCCccccceeeeeccCCCceEEEEEeeec
Q 011138 143 RVVGTGSFGVVFQAKCLETGDSVAIKKVLQD-----KRYKNRELQIMRLLNHPNVVSLKHCFFSTTEKDELYLNLVLEYI 217 (492)
Q Consensus 143 ~~lG~G~fg~Vy~~~~~~~g~~vAiK~~~~~-----~~~~~~E~~il~~l~h~nIv~l~~~~~~~~~~~~~~~~lV~E~~ 217 (492)
+.||+|+||.||+|.+..+|+.||+|.+... .....+|+++++.++||||+++++++ .+...+++||||+
T Consensus 1 ~~lg~g~~g~vy~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~-----~~~~~~~lv~e~~ 75 (252)
T cd05084 1 ERIGRGNFGEVFSGRLRADNTPVAVKSCRETLPPDLKAKFLQEARILKQYSHPNIVRLIGVC-----TQKQPIYIVMELV 75 (252)
T ss_pred CccCcccCccEEEEEEecCCceEEEEecCccCCHHHHHHHHHHHHHHHhCCCCCcceEEEEE-----cCCCCeEEEEeec
Confidence 3699999999999999999999999987532 23356799999999999999999988 3444688999999
Q ss_pred hhh-HHHHhhhhhhcCCCcCHHHHHHHHHHHHHHHHHHHhhCCcccCCCCCCceEEcCCCCcEEEeeecCccccCCCCCC
Q 011138 218 SET-VYRVSKHYTRMNQHVPILYVQLYTYQICRALNYLHHVVGVCHRDIKPQNLLVNPHTHQLKICDFGSAKMLVPGEPN 296 (492)
Q Consensus 218 ~~~-l~~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~yLH~~~givHrDlKp~NILl~~~~~~vkL~DFG~a~~~~~~~~~ 296 (492)
.++ +.+.+. .....+++..+..++.||+.||.|||+ +||+||||||+|||++.++ .+||+|||++.........
T Consensus 76 ~~~~L~~~~~---~~~~~~~~~~~~~~~~qi~~~L~~lH~-~~i~H~dl~p~nil~~~~~-~~kl~dfg~~~~~~~~~~~ 150 (252)
T cd05084 76 QGGDFLTFLR---TEGPRLKVKELIQMVENAAAGMEYLES-KHCIHRDLAARNCLVTEKN-VLKISDFGMSREEEDGVYA 150 (252)
T ss_pred cCCcHHHHHH---hCCCCCCHHHHHHHHHHHHHHHHHHHh-CCccccccchheEEEcCCC-cEEECccccCccccccccc
Confidence 865 333332 223457889999999999999999997 9999999999999999877 7999999998754322111
Q ss_pred c---cceeccCccCchhhcCCCCCCcchhhHHHHHHHHHHHh-CCCCCCCCChHHHHHHHHHHhCCCCHHHHhhcCCCCc
Q 011138 297 I---SYICSRYYRAPELIFGATEYTTAIDMWSIGCVLAELLL-GQPLFPGESGVDQLVEIIKILGTPTREEIKCMNPNYT 372 (492)
Q Consensus 297 ~---~~~gt~~y~aPE~~~~~~~~~~~~DvwSlGvil~ell~-G~~pf~~~~~~~~~~~i~~~~g~p~~~~~~~~~~~~~ 372 (492)
. ...++..|+|||.+.+. .++.++|||||||++|+|++ |..||...........+....
T Consensus 151 ~~~~~~~~~~~y~aPE~~~~~-~~~~~~Dv~slG~il~e~~~~~~~p~~~~~~~~~~~~~~~~~---------------- 213 (252)
T cd05084 151 STGGMKQIPVKWTAPEALNYG-RYSSESDVWSFGILLWEAFSLGAVPYANLSNQQTREAIEQGV---------------- 213 (252)
T ss_pred ccCCCCCCceeecCchhhcCC-CCChHHHHHHHHHHHHHHHhCCCCCccccCHHHHHHHHHcCC----------------
Confidence 1 11224569999998654 48999999999999999997 999997765543333222100
Q ss_pred ccCCCcccCCCcccccCCCCChhHhhhhccccccCCCCcCCHHHhhC
Q 011138 373 EFKFPQIKAHPWHKIFHKRMPPEALDLVSRLLQYSPSLRCTALEACA 419 (492)
Q Consensus 373 ~~~~~~~~~~~~~~~~~~~~s~~~~~Li~~~L~~dP~~R~t~~e~l~ 419 (492)
.. .++...+..+.+|+.+||+.||++|||+.++++
T Consensus 214 ~~------------~~~~~~~~~~~~li~~~l~~~p~~Rps~~~~~~ 248 (252)
T cd05084 214 RL------------PCPELCPDAVYRLMERCWEYDPGQRPSFSTVHQ 248 (252)
T ss_pred CC------------CCcccCCHHHHHHHHHHcCCChhhCcCHHHHHH
Confidence 00 012346889999999999999999999999874
No 286
>cd05089 PTKc_Tie1 Catalytic domain of the Protein Tyrosine Kinase, Tie1. Protein Tyrosine Kinase (PTK) family; Tie1; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie1 is a receptor tyr kinase (RTK) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie receptors are specifically expressed in endothelial cells and hematopoietic stem cells. No specific ligand has been identified for Tie1, although the angiopoietin, Ang-1, binds to Tie1 through integrins at high concentrations.
Probab=100.00 E-value=4e-39 Score=317.70 Aligned_cols=247 Identities=22% Similarity=0.294 Sum_probs=190.1
Q ss_pred ceeEeeeeccCCceEEEEEEEcCCCC--EEEEEEeccc-----hhhHHHHHHHHHHc-CCCCccccceeeeeccCCCceE
Q 011138 138 SYMAERVVGTGSFGVVFQAKCLETGD--SVAIKKVLQD-----KRYKNRELQIMRLL-NHPNVVSLKHCFFSTTEKDELY 209 (492)
Q Consensus 138 ~y~~~~~lG~G~fg~Vy~~~~~~~g~--~vAiK~~~~~-----~~~~~~E~~il~~l-~h~nIv~l~~~~~~~~~~~~~~ 209 (492)
+|.+.+.||+|+||.||+|.+..++. .+++|.+... .....+|+.++.++ +||||+++++++ .....
T Consensus 3 ~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~-----~~~~~ 77 (297)
T cd05089 3 DIKFEDVIGEGNFGQVIRAMIKKDGLKMNAAIKMLKEFASENDHRDFAGELEVLCKLGHHPNIINLLGAC-----ENRGY 77 (297)
T ss_pred cceeeeeecCCCcceEEEEEecCCCCcceeEEEEccccCCHHHHHHHHHHHHHHHhhcCCCchhheEEEE-----ccCCc
Confidence 58999999999999999999877765 4688877532 12355799999999 799999999987 44446
Q ss_pred EEEEeeechh-hHHHHhhhhhh------------cCCCcCHHHHHHHHHHHHHHHHHHHhhCCcccCCCCCCceEEcCCC
Q 011138 210 LNLVLEYISE-TVYRVSKHYTR------------MNQHVPILYVQLYTYQICRALNYLHHVVGVCHRDIKPQNLLVNPHT 276 (492)
Q Consensus 210 ~~lV~E~~~~-~l~~~~~~~~~------------~~~~~~~~~~~~i~~qi~~aL~yLH~~~givHrDlKp~NILl~~~~ 276 (492)
+|+||||+++ ++.+.+..... ....+++..++.++.||+.||+|||+ +||+||||||+|||++.++
T Consensus 78 ~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~al~~lH~-~~ivH~dlkp~Nill~~~~ 156 (297)
T cd05089 78 LYIAIEYAPYGNLLDFLRKSRVLETDPAFAKEHGTASTLTSQQLLQFASDVATGMQYLSE-KQFIHRDLAARNVLVGENL 156 (297)
T ss_pred ceEEEEecCCCcHHHHHHhccccccccccccccCccCCCCHHHHHHHHHHHHHHHHHHHH-CCcccCcCCcceEEECCCC
Confidence 8899999985 45554432110 12357888999999999999999997 9999999999999999877
Q ss_pred CcEEEeeecCccccCCCCCCccceeccCccCchhhcCCCCCCcchhhHHHHHHHHHHHh-CCCCCCCCChHHHHHHHHHH
Q 011138 277 HQLKICDFGSAKMLVPGEPNISYICSRYYRAPELIFGATEYTTAIDMWSIGCVLAELLL-GQPLFPGESGVDQLVEIIKI 355 (492)
Q Consensus 277 ~~vkL~DFG~a~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DvwSlGvil~ell~-G~~pf~~~~~~~~~~~i~~~ 355 (492)
.+||+|||++..............+..|+|||++.+. .++.++|||||||++|||++ |..||.+....+....+...
T Consensus 157 -~~kl~dfg~~~~~~~~~~~~~~~~~~~y~aPE~~~~~-~~~~~~DvwSlG~il~el~t~g~~pf~~~~~~~~~~~~~~~ 234 (297)
T cd05089 157 -ASKIADFGLSRGEEVYVKKTMGRLPVRWMAIESLNYS-VYTTKSDVWSFGVLLWEIVSLGGTPYCGMTCAELYEKLPQG 234 (297)
T ss_pred -eEEECCcCCCccccceeccCCCCcCccccCchhhccC-CCCchhhHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHhcC
Confidence 7999999998643221112222335579999998654 48999999999999999997 99999887765544433221
Q ss_pred hCCCCHHHHhhcCCCCcccCCCcccCCCcccccCCCCChhHhhhhccccccCCCCcCCHHHhhCC
Q 011138 356 LGTPTREEIKCMNPNYTEFKFPQIKAHPWHKIFHKRMPPEALDLVSRLLQYSPSLRCTALEACAH 420 (492)
Q Consensus 356 ~g~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~Li~~~L~~dP~~R~t~~e~l~H 420 (492)
. .. ..+..++.++.+||.+||..||.+||+++++++.
T Consensus 235 ~------------------~~----------~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~i~~~ 271 (297)
T cd05089 235 Y------------------RM----------EKPRNCDDEVYELMRQCWRDRPYERPPFAQISVQ 271 (297)
T ss_pred C------------------CC----------CCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHH
Confidence 0 00 0123478899999999999999999999999764
No 287
>cd05114 PTKc_Tec_Rlk Catalytic domain of the Protein Tyrosine Kinases, Tyrosine kinase expressed in hepatocellular carcinoma and Resting lymphocyte kinase. Protein Tyrosine Kinase (PTK) family; Tyrosine kinase expressed in hepatocellular carcinoma (Tec) and Resting lymphocyte kinase (Rlk); catalytic (c) domain. The PTKc family is part of a larger superfamily, that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tec and Rlk (also named Txk) are members of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin h
Probab=100.00 E-value=7e-39 Score=308.75 Aligned_cols=243 Identities=21% Similarity=0.310 Sum_probs=191.5
Q ss_pred cceeEeeeeccCCceEEEEEEEcCCCCEEEEEEeccc---hhhHHHHHHHHHHcCCCCccccceeeeeccCCCceEEEEE
Q 011138 137 ISYMAERVVGTGSFGVVFQAKCLETGDSVAIKKVLQD---KRYKNRELQIMRLLNHPNVVSLKHCFFSTTEKDELYLNLV 213 (492)
Q Consensus 137 ~~y~~~~~lG~G~fg~Vy~~~~~~~g~~vAiK~~~~~---~~~~~~E~~il~~l~h~nIv~l~~~~~~~~~~~~~~~~lV 213 (492)
..|.+.+.||+|+||.||++.+. .+..+|+|.+... .....+|+.+++.++||||+++++++ .....+++|
T Consensus 4 ~~~~~~~~lg~G~~~~vy~~~~~-~~~~~a~K~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~-----~~~~~~~iv 77 (256)
T cd05114 4 SELTFMKELGSGQFGVVHLGKWR-AQIKVAIKAINEGAMSEEDFIEEAKVMMKLSHPKLVQLYGVC-----TQQKPLYIV 77 (256)
T ss_pred HHcEEeeEecCCcCceEEEEEec-cCceEEEEecccCCccHHHHHHHHHHHHHCCCCCceeEEEEE-----ccCCCEEEE
Confidence 35888999999999999999865 4568999987543 23456799999999999999999988 344458999
Q ss_pred eeechhh-HHHHhhhhhhcCCCcCHHHHHHHHHHHHHHHHHHHhhCCcccCCCCCCceEEcCCCCcEEEeeecCccccCC
Q 011138 214 LEYISET-VYRVSKHYTRMNQHVPILYVQLYTYQICRALNYLHHVVGVCHRDIKPQNLLVNPHTHQLKICDFGSAKMLVP 292 (492)
Q Consensus 214 ~E~~~~~-l~~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~yLH~~~givHrDlKp~NILl~~~~~~vkL~DFG~a~~~~~ 292 (492)
|||++++ +.+.+.. ....+++..+..++.||+.||.|||+ +||+||||||+||+++.++ .+||+|||.++....
T Consensus 78 ~e~~~~~~L~~~~~~---~~~~~~~~~~~~~~~~i~~~l~~lH~-~~i~H~dl~p~ni~i~~~~-~~kl~d~g~~~~~~~ 152 (256)
T cd05114 78 TEFMENGCLLNYLRQ---RQGKLSKDMLLSMCQDVCEGMEYLER-NSFIHRDLAARNCLVSSTG-VVKVSDFGMTRYVLD 152 (256)
T ss_pred EEcCCCCcHHHHHHh---CccCCCHHHHHHHHHHHHHHHHHHHH-CCccccccCcceEEEcCCC-eEEECCCCCccccCC
Confidence 9999865 4443321 22457888999999999999999997 9999999999999999877 799999999876533
Q ss_pred CCCC--ccceeccCccCchhhcCCCCCCcchhhHHHHHHHHHHHh-CCCCCCCCChHHHHHHHHHHhCCCCHHHHhhcCC
Q 011138 293 GEPN--ISYICSRYYRAPELIFGATEYTTAIDMWSIGCVLAELLL-GQPLFPGESGVDQLVEIIKILGTPTREEIKCMNP 369 (492)
Q Consensus 293 ~~~~--~~~~gt~~y~aPE~~~~~~~~~~~~DvwSlGvil~ell~-G~~pf~~~~~~~~~~~i~~~~g~p~~~~~~~~~~ 369 (492)
.... ....++..|+|||++.+. .++.++|+|||||++|+|++ |+.||...+..+.+..+....
T Consensus 153 ~~~~~~~~~~~~~~y~aPE~~~~~-~~~~~~Di~s~G~~l~el~~~g~~p~~~~~~~~~~~~i~~~~------------- 218 (256)
T cd05114 153 DEYTSSSGAKFPVKWSPPEVFNFS-KYSSKSDVWSFGVLMWEVFTEGKMPFEKKSNYEVVEMISRGF------------- 218 (256)
T ss_pred CceeccCCCCCchhhCChhhcccC-ccchhhhhHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHHCCC-------------
Confidence 2211 122345689999998654 48999999999999999999 999998877666555543310
Q ss_pred CCcccCCCcccCCCcccccCCCCChhHhhhhccccccCCCCcCCHHHhhC
Q 011138 370 NYTEFKFPQIKAHPWHKIFHKRMPPEALDLVSRLLQYSPSLRCTALEACA 419 (492)
Q Consensus 370 ~~~~~~~~~~~~~~~~~~~~~~~s~~~~~Li~~~L~~dP~~R~t~~e~l~ 419 (492)
... .+...+.++.+|+.+||..||.+||++.++++
T Consensus 219 ---~~~------------~~~~~~~~~~~li~~c~~~~p~~Rps~~~l~~ 253 (256)
T cd05114 219 ---RLY------------RPKLASMTVYEVMYSCWHEKPEGRPTFAELLR 253 (256)
T ss_pred ---CCC------------CCCCCCHHHHHHHHHHccCCcccCcCHHHHHH
Confidence 000 11235788999999999999999999999975
No 288
>cd06634 STKc_TAO2 Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 2. Serine/threonine kinases (STKs), thousand-and-one amino acids 2 (TAO2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. Human TAO2 is also known as prostate-derived Ste20-like kinase (PSK) and was identified in a screen for overexpressed RNAs in prostate cancer. TAO2 activates both p38 and c-Jun N-terminal kinase (JNK), by phosphorylating and activatin
Probab=100.00 E-value=5.7e-39 Score=318.40 Aligned_cols=251 Identities=27% Similarity=0.414 Sum_probs=201.7
Q ss_pred ceeEeeeeccCCceEEEEEEEcCCCCEEEEEEeccc-------hhhHHHHHHHHHHcCCCCccccceeeeeccCCCceEE
Q 011138 138 SYMAERVVGTGSFGVVFQAKCLETGDSVAIKKVLQD-------KRYKNRELQIMRLLNHPNVVSLKHCFFSTTEKDELYL 210 (492)
Q Consensus 138 ~y~~~~~lG~G~fg~Vy~~~~~~~g~~vAiK~~~~~-------~~~~~~E~~il~~l~h~nIv~l~~~~~~~~~~~~~~~ 210 (492)
.|...+.||+|+||.||+|++..+++.||+|.+... .....+|+.+++.++|+|++++++++.. ....
T Consensus 16 ~~~~~~~lg~g~~g~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~-----~~~~ 90 (308)
T cd06634 16 LFSDLREIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQKLRHPNTIQYRGCYLR-----EHTA 90 (308)
T ss_pred HHHHHHheeeCCCEEEEEEEEcCCCcEEEEEEEecccccChHHHHHHHHHHHHHHhCCCCCcccEEEEEEc-----CCee
Confidence 477788999999999999999999999999987532 1223479999999999999999998843 3458
Q ss_pred EEEeeechhhHHHHhhhhhhcCCCcCHHHHHHHHHHHHHHHHHHHhhCCcccCCCCCCceEEcCCCCcEEEeeecCcccc
Q 011138 211 NLVLEYISETVYRVSKHYTRMNQHVPILYVQLYTYQICRALNYLHHVVGVCHRDIKPQNLLVNPHTHQLKICDFGSAKML 290 (492)
Q Consensus 211 ~lV~E~~~~~l~~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~yLH~~~givHrDlKp~NILl~~~~~~vkL~DFG~a~~~ 290 (492)
++||||+.+++...+.. ....+++..+..++.|++.||.|||+ +|++||||||+|||++.++ .+||+|||++...
T Consensus 91 ~lv~e~~~~~l~~~~~~---~~~~l~~~~~~~~~~~l~~~l~~LH~-~~i~H~dl~p~nil~~~~~-~~kl~dfg~~~~~ 165 (308)
T cd06634 91 WLVMEYCLGSASDLLEV---HKKPLQEVEIAAVTHGALQGLAYLHS-HNMIHRDVKAGNILLSEPG-LVKLGDFGSASIM 165 (308)
T ss_pred EEEEEccCCCHHHHHHH---cCCCCCHHHHHHHHHHHHHHHHHHHh-CCcccCCCCHHhEEECCCC-cEEECCcccceee
Confidence 89999999877655432 23457888999999999999999997 9999999999999999877 7999999998765
Q ss_pred CCCCCCccceeccCccCchhhcC--CCCCCcchhhHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCCHHHHhhcC
Q 011138 291 VPGEPNISYICSRYYRAPELIFG--ATEYTTAIDMWSIGCVLAELLLGQPLFPGESGVDQLVEIIKILGTPTREEIKCMN 368 (492)
Q Consensus 291 ~~~~~~~~~~gt~~y~aPE~~~~--~~~~~~~~DvwSlGvil~ell~G~~pf~~~~~~~~~~~i~~~~g~p~~~~~~~~~ 368 (492)
.. .....+++.|+|||.+.+ ...++.++|||||||++|+|++|..||...+..+....+....
T Consensus 166 ~~---~~~~~~~~~y~aPE~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~~~~~~~~~~~------------ 230 (308)
T cd06634 166 AP---ANXFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNAMSALYHIAQNE------------ 230 (308)
T ss_pred cC---cccccCCccccCHHHHhhcccCCCCcccchHHHHHHHHHHHcCCCCCccccHHHHHHHHhhcC------------
Confidence 32 234578899999999852 2347889999999999999999999998765544444332210
Q ss_pred CCCcccCCCcccCCCcccccCCCCChhHhhhhccccccCCCCcCCHHHhhCCCCCCCCCC
Q 011138 369 PNYTEFKFPQIKAHPWHKIFHKRMPPEALDLVSRLLQYSPSLRCTALEACAHPFFDDLRD 428 (492)
Q Consensus 369 ~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~Li~~~L~~dP~~R~t~~e~l~Hp~f~~~~~ 428 (492)
.+.. .....+..+++||.+||..+|.+||++.+++.|||+.....
T Consensus 231 -------~~~~--------~~~~~~~~~~~li~~cl~~~P~~Rp~~~~ll~~~~~~~~~~ 275 (308)
T cd06634 231 -------SPAL--------QSGHWSEYFRNFVDSCLQKIPQDRPTSEVLLKHRFVLRERP 275 (308)
T ss_pred -------CCCc--------CcccccHHHHHHHHHHhhCCcccCCCHHHHhhCccccccCC
Confidence 0000 11246788999999999999999999999999999998543
No 289
>KOG1151 consensus Tousled-like protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=7.7e-41 Score=322.37 Aligned_cols=263 Identities=26% Similarity=0.404 Sum_probs=210.3
Q ss_pred CccccceeEeeeeccCCceEEEEEEEcCCCCEEEEEEeccchh-----------hHHHHHHHHHHcCCCCccccceeeee
Q 011138 133 PKQTISYMAERVVGTGSFGVVFQAKCLETGDSVAIKKVLQDKR-----------YKNRELQIMRLLNHPNVVSLKHCFFS 201 (492)
Q Consensus 133 ~~~~~~y~~~~~lG~G~fg~Vy~~~~~~~g~~vAiK~~~~~~~-----------~~~~E~~il~~l~h~nIv~l~~~~~~ 201 (492)
|....+|.+..+||+|||+.||+|.+....+.||||+-...+. ..-+|..|.+.|+||.||++|++|..
T Consensus 459 ptLn~RYLlLhLLGrGGFSEVyKAFDl~EqRYvAvKIHqlNK~WrdEKKeNYhKHAcREyrIHKeLDHpRIVKlYDyfsl 538 (775)
T KOG1151|consen 459 PTLNDRYLLLHLLGRGGFSEVYKAFDLTEQRYVAVKIHQLNKNWRDEKKENYHKHACREYRIHKELDHPRIVKLYDYFSL 538 (775)
T ss_pred cchHHHHHHHHHhccccHHHHHHhcccchhheeeEeeehhccchhhHhhhhHHHHHHHHHhhhhccCcceeeeeeeeeee
Confidence 4445689999999999999999999999999999997532211 12279999999999999999999853
Q ss_pred ccCCCceEEEEEeeechhhHHHHhhhhhhcCCCcCHHHHHHHHHHHHHHHHHHHhh-CCcccCCCCCCceEEcCC--CCc
Q 011138 202 TTEKDELYLNLVLEYISETVYRVSKHYTRMNQHVPILYVQLYTYQICRALNYLHHV-VGVCHRDIKPQNLLVNPH--THQ 278 (492)
Q Consensus 202 ~~~~~~~~~~lV~E~~~~~l~~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~yLH~~-~givHrDlKp~NILl~~~--~~~ 278 (492)
|...+|-|+|||+|..+++ +.+.++.+++.+++.|+.||+.||.||... ..|||-||||.|||+... .+.
T Consensus 539 ----DtdsFCTVLEYceGNDLDF---YLKQhklmSEKEARSIiMQiVnAL~YLNEikpPIIHYDLKPgNILLv~GtacGe 611 (775)
T KOG1151|consen 539 ----DTDSFCTVLEYCEGNDLDF---YLKQHKLMSEKEARSIIMQIVNALKYLNEIKPPIIHYDLKPGNILLVNGTACGE 611 (775)
T ss_pred ----ccccceeeeeecCCCchhH---HHHhhhhhhHHHHHHHHHHHHHHHHHHhccCCCeeeeccCCccEEEecCcccce
Confidence 3335899999999976654 455677899999999999999999999952 369999999999999533 247
Q ss_pred EEEeeecCccccCCCCCC--------ccceeccCccCchhhcC---CCCCCcchhhHHHHHHHHHHHhCCCCCCCCChHH
Q 011138 279 LKICDFGSAKMLVPGEPN--------ISYICSRYYRAPELIFG---ATEYTTAIDMWSIGCVLAELLLGQPLFPGESGVD 347 (492)
Q Consensus 279 vkL~DFG~a~~~~~~~~~--------~~~~gt~~y~aPE~~~~---~~~~~~~~DvwSlGvil~ell~G~~pf~~~~~~~ 347 (492)
+||+|||+++++..+... ....||.+|++||.+.- ....+.++||||+|||+|.++.|+.||.......
T Consensus 612 IKITDFGLSKIMdddSy~~vdGmeLTSQgAGTYWYLPPEcFvVgkePPKIsnKVDVWSvGVIFyQClYGrKPFGhnqsQQ 691 (775)
T KOG1151|consen 612 IKITDFGLSKIMDDDSYNSVDGMELTSQGAGTYWYLPPECFVVGKEPPKISNKVDVWSVGVIFYQCLYGRKPFGHNQSQQ 691 (775)
T ss_pred eEeeecchhhhccCCccCcccceeeecccCceeeecCcceeecCCCCCccccceeeEeeehhhhhhhccCCCCCCchhHH
Confidence 999999999988544322 24678999999999843 3457899999999999999999999997755443
Q ss_pred HHHHHHHHhCCCCHHHHhhcCCCCcccCCCcccCCCcccccCCCCChhHhhhhccccccCCCCcCCHHHhhCCCCCCC
Q 011138 348 QLVEIIKILGTPTREEIKCMNPNYTEFKFPQIKAHPWHKIFHKRMPPEALDLVSRLLQYSPSLRCTALEACAHPFFDD 425 (492)
Q Consensus 348 ~~~~i~~~~g~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~Li~~~L~~dP~~R~t~~e~l~Hp~f~~ 425 (492)
.+.+--.++ +.++..||.. +.++.++++||++||++--++|+...++..||||..
T Consensus 692 dILqeNTIl-------------kAtEVqFP~K----------PvVsseAkaFIRRCLaYRKeDR~DV~qLA~dpyllP 746 (775)
T KOG1151|consen 692 DILQENTIL-------------KATEVQFPPK----------PVVSSEAKAFIRRCLAYRKEDRIDVQQLACDPYLLP 746 (775)
T ss_pred HHHhhhchh-------------cceeccCCCC----------CccCHHHHHHHHHHHHhhhhhhhhHHHHccCccccc
Confidence 333211111 1255666653 358999999999999999999999999999999974
No 290
>cd05075 PTKc_Axl Catalytic domain of the Protein Tyrosine Kinase, Axl. Protein Tyrosine Kinase (PTK) family; Axl; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Axl is a member of the Axl subfamily, which is composed of receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Axl is widely expressed in a variety of organs and cells including epithelial, mesenchymal, hematopoietic, as well as non-transfor
Probab=100.00 E-value=4.9e-39 Score=312.40 Aligned_cols=250 Identities=20% Similarity=0.265 Sum_probs=189.7
Q ss_pred eEeeeeccCCceEEEEEEEcCCCC--EEEEEEeccc------hhhHHHHHHHHHHcCCCCccccceeeeeccC-CCceEE
Q 011138 140 MAERVVGTGSFGVVFQAKCLETGD--SVAIKKVLQD------KRYKNRELQIMRLLNHPNVVSLKHCFFSTTE-KDELYL 210 (492)
Q Consensus 140 ~~~~~lG~G~fg~Vy~~~~~~~g~--~vAiK~~~~~------~~~~~~E~~il~~l~h~nIv~l~~~~~~~~~-~~~~~~ 210 (492)
.+++.||+|+||.||+|.+..++. .||+|.+... .....+|+.+++.++|+||++++++++.... ......
T Consensus 2 ~i~~~ig~G~~g~V~~~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~~ 81 (272)
T cd05075 2 ALGKTLGEGEFGSVMEGQLNQDDSILKVAVKTMKIAICTRSEMEDFLSEAVCMKEFDHPNVMRLIGVCLQTVESEGYPSP 81 (272)
T ss_pred ccccccCcccCceEEEeEEccCCCeeeEEEEecccCcCCHHHHHHHHHHHHHHHhCCCCCcceEEEEEccCCcccCCCCc
Confidence 467889999999999999887775 5899987432 2334579999999999999999987654332 222346
Q ss_pred EEEeeechhh-HHHHhhhh--hhcCCCcCHHHHHHHHHHHHHHHHHHHhhCCcccCCCCCCceEEcCCCCcEEEeeecCc
Q 011138 211 NLVLEYISET-VYRVSKHY--TRMNQHVPILYVQLYTYQICRALNYLHHVVGVCHRDIKPQNLLVNPHTHQLKICDFGSA 287 (492)
Q Consensus 211 ~lV~E~~~~~-l~~~~~~~--~~~~~~~~~~~~~~i~~qi~~aL~yLH~~~givHrDlKp~NILl~~~~~~vkL~DFG~a 287 (492)
++||||+.++ +...+... ......+++..+..++.||+.||.|||+ +||+||||||+|||++.++ .+||+|||++
T Consensus 82 ~~v~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~-~~i~H~dlkp~Nil~~~~~-~~kl~Dfg~~ 159 (272)
T cd05075 82 VVILPFMKHGDLHSFLLYSRLGDCPQYLPTQMLVKFMTDIASGMEYLSS-KSFIHRDLAARNCMLNENM-NVCVADFGLS 159 (272)
T ss_pred EEEEEeCCCCcHHHHHHHhcccCCcccCCHHHHHHHHHHHHHHHHHHHH-CCeeccccchhheEEcCCC-CEEECCCCcc
Confidence 7999999854 44333221 1123457889999999999999999997 9999999999999999887 7999999999
Q ss_pred cccCCCCC---CccceeccCccCchhhcCCCCCCcchhhHHHHHHHHHHHh-CCCCCCCCChHHHHHHHHHHhCCCCHHH
Q 011138 288 KMLVPGEP---NISYICSRYYRAPELIFGATEYTTAIDMWSIGCVLAELLL-GQPLFPGESGVDQLVEIIKILGTPTREE 363 (492)
Q Consensus 288 ~~~~~~~~---~~~~~gt~~y~aPE~~~~~~~~~~~~DvwSlGvil~ell~-G~~pf~~~~~~~~~~~i~~~~g~p~~~~ 363 (492)
+....... .....+++.|+|||.+.+. .++.++|||||||++|+|++ |..||.+....+....+... .
T Consensus 160 ~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~-~~~~~~Di~slG~il~el~~~g~~p~~~~~~~~~~~~~~~~--~----- 231 (272)
T cd05075 160 KKIYNGDYYRQGRIAKMPVKWIAIESLADR-VYTTKSDVWSFGVTMWEIATRGQTPYPGVENSEIYDYLRQG--N----- 231 (272)
T ss_pred cccCcccceecCCcccCCcccCCHHHccCC-CcChHHHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHHcC--C-----
Confidence 87643321 1123456789999998654 58999999999999999999 89999886654433333210 0
Q ss_pred HhhcCCCCcccCCCcccCCCcccccCCCCChhHhhhhccccccCCCCcCCHHHhhCC
Q 011138 364 IKCMNPNYTEFKFPQIKAHPWHKIFHKRMPPEALDLVSRLLQYSPSLRCTALEACAH 420 (492)
Q Consensus 364 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~Li~~~L~~dP~~R~t~~e~l~H 420 (492)
.. ..+..++..+.++|.+||+.||++|||+.+++++
T Consensus 232 -----------~~----------~~~~~~~~~~~~li~~~l~~~p~~Rps~~~l~~~ 267 (272)
T cd05075 232 -----------RL----------KQPPDCLDGLYSLMSSCWLLNPKDRPSFETLRCE 267 (272)
T ss_pred -----------CC----------CCCCCCCHHHHHHHHHHcCCCcccCcCHHHHHHH
Confidence 00 0123467889999999999999999999999763
No 291
>cd05049 PTKc_Trk Catalytic domain of the Protein Tyrosine Kinases, Tropomyosin Related Kinases. Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase (Trk) subfamily; catalytic (c) domain. The Trk subfamily consists of TrkA, TrkB, TrkC, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Trk subfamily members are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, the nerve growth factor (NGF) family of neutrotrophins, leads to Trk receptor oligomerization and activation of the catalyt
Probab=100.00 E-value=4.4e-39 Score=314.09 Aligned_cols=247 Identities=22% Similarity=0.327 Sum_probs=193.5
Q ss_pred cceeEeeeeccCCceEEEEEEEc-----CCCCEEEEEEeccc-----hhhHHHHHHHHHHcCCCCccccceeeeeccCCC
Q 011138 137 ISYMAERVVGTGSFGVVFQAKCL-----ETGDSVAIKKVLQD-----KRYKNRELQIMRLLNHPNVVSLKHCFFSTTEKD 206 (492)
Q Consensus 137 ~~y~~~~~lG~G~fg~Vy~~~~~-----~~g~~vAiK~~~~~-----~~~~~~E~~il~~l~h~nIv~l~~~~~~~~~~~ 206 (492)
..|.+.+.||+|+||.||+|.+. .++..||||.+... .....+|+++++.++|+||+++++++..
T Consensus 5 ~~~~~~~~lg~g~~~~v~~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~----- 79 (280)
T cd05049 5 DTIVLKRELGEGAFGKVFLGECYHLEPENDKELVAVKTLKETASNDARKDFEREAELLTNFQHENIVKFYGVCTE----- 79 (280)
T ss_pred HHhhHHhhccccCCceEeeeeeccccCcCCcceEEEEeecccCCHHHHHHHHHHHHHHHhcCCCCchheeeEEec-----
Confidence 45889999999999999999874 34678999988543 2345689999999999999999998843
Q ss_pred ceEEEEEeeechhh-HHHHhhhh----------hhcCCCcCHHHHHHHHHHHHHHHHHHHhhCCcccCCCCCCceEEcCC
Q 011138 207 ELYLNLVLEYISET-VYRVSKHY----------TRMNQHVPILYVQLYTYQICRALNYLHHVVGVCHRDIKPQNLLVNPH 275 (492)
Q Consensus 207 ~~~~~lV~E~~~~~-l~~~~~~~----------~~~~~~~~~~~~~~i~~qi~~aL~yLH~~~givHrDlKp~NILl~~~ 275 (492)
....++||||+.++ +...+... ......+++..+..++.||+.||.|||+ +||+||||||+||+++.+
T Consensus 80 ~~~~~lv~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lH~-~~i~h~dlkp~nili~~~ 158 (280)
T cd05049 80 GDPPIMVFEYMEHGDLNKFLRSHGPDAAFLKSPDSPMGELTLSQLLQIAVQIASGMVYLAS-QHFVHRDLATRNCLVGYD 158 (280)
T ss_pred CCCeEEEEecCCCCCHHHHHHhcCCchhhhcccccccccccHHHHHHHHHHHHHHHHHHhh-CCeeccccccceEEEcCC
Confidence 34589999999865 33333221 1112457888899999999999999997 999999999999999988
Q ss_pred CCcEEEeeecCccccCCCCC---CccceeccCccCchhhcCCCCCCcchhhHHHHHHHHHHHh-CCCCCCCCChHHHHHH
Q 011138 276 THQLKICDFGSAKMLVPGEP---NISYICSRYYRAPELIFGATEYTTAIDMWSIGCVLAELLL-GQPLFPGESGVDQLVE 351 (492)
Q Consensus 276 ~~~vkL~DFG~a~~~~~~~~---~~~~~gt~~y~aPE~~~~~~~~~~~~DvwSlGvil~ell~-G~~pf~~~~~~~~~~~ 351 (492)
+ .+||+|||++........ .....+++.|+|||++.+. .++.++|||||||++|+|++ |..||.+.+..+....
T Consensus 159 ~-~~kl~d~g~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~-~~~~~~Di~slG~il~e~~~~g~~p~~~~~~~~~~~~ 236 (280)
T cd05049 159 L-VVKIGDFGMSRDVYTTDYYRVGGHTMLPIRWMPPESIMYR-KFTTESDVWSFGVVLWEIFTYGKQPWYGLSNEEVIEC 236 (280)
T ss_pred C-eEEECCcccceecccCcceecCCCCcccceecChhhhccC-CcchhhhHHHHHHHHHHHHhcCCCCCCCCCHHHHHHH
Confidence 7 899999999875432221 2234557889999999655 48999999999999999998 9999988776555444
Q ss_pred HHHHhCCCCHHHHhhcCCCCcccCCCcccCCCcccccCCCCChhHhhhhccccccCCCCcCCHHHhhC
Q 011138 352 IIKILGTPTREEIKCMNPNYTEFKFPQIKAHPWHKIFHKRMPPEALDLVSRLLQYSPSLRCTALEACA 419 (492)
Q Consensus 352 i~~~~g~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~Li~~~L~~dP~~R~t~~e~l~ 419 (492)
+... . .+ ..+..++..+++||.+||+.||.+||++.|+++
T Consensus 237 ~~~~--~-----------------~~---------~~~~~~~~~~~~li~~~l~~~p~~Rp~~~eil~ 276 (280)
T cd05049 237 ITQG--R-----------------LL---------QRPRTCPSEVYDIMLGCWKRDPQQRINIKDIHE 276 (280)
T ss_pred HHcC--C-----------------cC---------CCCCCCCHHHHHHHHHHcCCCcccCCCHHHHHH
Confidence 4320 0 00 011346889999999999999999999999975
No 292
>cd08530 STKc_CNK2-like Catalytic domain of the Protein Serine/Threonine Kinase, Chlamydomonas reinhardtii CNK2, and similar domains. Serine/Threonine Kinases (STKs), Chlamydomonas reinhardtii Never In Mitosis gene A (NIMA)-related kinase 1 (CNK2)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Chlamydomonas reinhardtii CNK2-like subfamily belongs to the (NIMA)-related kinase (Nek) family. The Nek family includes seven different Chlamydomonas Neks (CNKs 1-6 and Fa2). This subfamily includes CNK1, and -2. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Chlamydomonas reinhardtii CNK2 has both cilliary and cell cycle functions. It influences flagellar length through promoting flagellar disassembly, an
Probab=100.00 E-value=1.3e-38 Score=306.22 Aligned_cols=249 Identities=28% Similarity=0.435 Sum_probs=201.5
Q ss_pred ceeEeeeeccCCceEEEEEEEcCCCCEEEEEEeccc------hhhHHHHHHHHHHcCCCCccccceeeeeccCCCceEEE
Q 011138 138 SYMAERVVGTGSFGVVFQAKCLETGDSVAIKKVLQD------KRYKNRELQIMRLLNHPNVVSLKHCFFSTTEKDELYLN 211 (492)
Q Consensus 138 ~y~~~~~lG~G~fg~Vy~~~~~~~g~~vAiK~~~~~------~~~~~~E~~il~~l~h~nIv~l~~~~~~~~~~~~~~~~ 211 (492)
+|.+.+.||.|+||.||++.+..+|+.+|+|.+... .....+|+.+++.++|+||+++++++. +....|
T Consensus 1 ~y~~~~~i~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~-----~~~~~~ 75 (256)
T cd08530 1 DFKVLKKLGKGSYGSVYKVKRLSDNQFYALKEVDLGSMSQKEREDAVNEIRILASVNHPNIISYKEAFL-----DGNKLC 75 (256)
T ss_pred CceEeeeecCCCceeEEEEEECCCCCEEEEEEEehhhccHHHHHHHHHHHHHHHhCCCCCchhhhhhhc-----cCCEEE
Confidence 488999999999999999999999999999987542 223347899999999999999999884 335688
Q ss_pred EEeeechh-hHHHHhhhhhhcCCCcCHHHHHHHHHHHHHHHHHHHhhCCcccCCCCCCceEEcCCCCcEEEeeecCcccc
Q 011138 212 LVLEYISE-TVYRVSKHYTRMNQHVPILYVQLYTYQICRALNYLHHVVGVCHRDIKPQNLLVNPHTHQLKICDFGSAKML 290 (492)
Q Consensus 212 lV~E~~~~-~l~~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~yLH~~~givHrDlKp~NILl~~~~~~vkL~DFG~a~~~ 290 (492)
+||||+++ ++...+.........+++..+..++.||+.||.|||+ .|++|+||+|.||+++.++ .+||+|||++...
T Consensus 76 ~v~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~l~~al~~lh~-~~i~h~~l~~~ni~~~~~~-~~kl~d~g~~~~~ 153 (256)
T cd08530 76 IVMEYAPFGDLSKAISKRKKKRKLIPEQEIWRIFIQLLRGLQALHE-QKILHRDLKSANILLVAND-LVKIGDLGISKVL 153 (256)
T ss_pred EEehhcCCCCHHHHHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHhh-CCcccCCCCcceEEEecCC-cEEEeeccchhhh
Confidence 99999976 4544444433334668888999999999999999997 9999999999999999876 7999999999876
Q ss_pred CCCCCCccceeccCccCchhhcCCCCCCcchhhHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCCHHHHhhcCCC
Q 011138 291 VPGEPNISYICSRYYRAPELIFGATEYTTAIDMWSIGCVLAELLLGQPLFPGESGVDQLVEIIKILGTPTREEIKCMNPN 370 (492)
Q Consensus 291 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DvwSlGvil~ell~G~~pf~~~~~~~~~~~i~~~~g~p~~~~~~~~~~~ 370 (492)
... ......+++.|+|||.+.+. .++.++|+||||+++|+|++|+.||...+..+....+..
T Consensus 154 ~~~-~~~~~~~~~~~~~Pe~~~~~-~~~~~~D~~slG~~~~~l~~g~~p~~~~~~~~~~~~~~~---------------- 215 (256)
T cd08530 154 KKN-MAKTQIGTPHYMAPEVWKGR-PYSYKSDIWSLGCLLYEMATFAPPFEARSMQDLRYKVQR---------------- 215 (256)
T ss_pred ccC-CcccccCCccccCHHHHCCC-CCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHhc----------------
Confidence 544 33345688999999998654 488899999999999999999999988765443333221
Q ss_pred CcccCCCcccCCCcccccCCCCChhHhhhhccccccCCCCcCCHHHhhCCCCC
Q 011138 371 YTEFKFPQIKAHPWHKIFHKRMPPEALDLVSRLLQYSPSLRCTALEACAHPFF 423 (492)
Q Consensus 371 ~~~~~~~~~~~~~~~~~~~~~~s~~~~~Li~~~L~~dP~~R~t~~e~l~Hp~f 423 (492)
..++. ....++.+++++|.+||..||.+||++.++++||++
T Consensus 216 ---~~~~~---------~~~~~~~~~~~li~~~l~~~p~~Rp~~~~~l~~p~~ 256 (256)
T cd08530 216 ---GKYPP---------IPPIYSQDLQNFIRSMLQVKPKLRPNCDKILASPAV 256 (256)
T ss_pred ---CCCCC---------CchhhCHHHHHHHHHHcCCCcccCCCHHHHhcCCCC
Confidence 01111 112467899999999999999999999999999985
No 293
>cd05108 PTKc_EGFR Catalytic domain of the Protein Tyrosine Kinase, Epidermal Growth Factor Receptor. Protein Tyrosine Kinase (PTK) family; Epidermal Growth Factor Receptor (EGFR); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EGFR (HER1, ErbB1) is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphor
Probab=100.00 E-value=3.2e-39 Score=321.29 Aligned_cols=244 Identities=23% Similarity=0.366 Sum_probs=189.8
Q ss_pred cceeEeeeeccCCceEEEEEEEcCCCCE----EEEEEeccc-----hhhHHHHHHHHHHcCCCCccccceeeeeccCCCc
Q 011138 137 ISYMAERVVGTGSFGVVFQAKCLETGDS----VAIKKVLQD-----KRYKNRELQIMRLLNHPNVVSLKHCFFSTTEKDE 207 (492)
Q Consensus 137 ~~y~~~~~lG~G~fg~Vy~~~~~~~g~~----vAiK~~~~~-----~~~~~~E~~il~~l~h~nIv~l~~~~~~~~~~~~ 207 (492)
.+|.+.+.||+|+||.||+|.+..+|+. ||+|.+... .....+|+.+++.++||||+++++++...
T Consensus 7 ~~f~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~g~~~~~----- 81 (316)
T cd05108 7 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLGICLTS----- 81 (316)
T ss_pred hhceeeeeeecCCCceEEEEEEecCCCccceeEEEEeccccCCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEcCC-----
Confidence 3599999999999999999998776664 899987532 23345799999999999999999987431
Q ss_pred eEEEEEeeechhh-HHHHhhhhhhcCCCcCHHHHHHHHHHHHHHHHHHHhhCCcccCCCCCCceEEcCCCCcEEEeeecC
Q 011138 208 LYLNLVLEYISET-VYRVSKHYTRMNQHVPILYVQLYTYQICRALNYLHHVVGVCHRDIKPQNLLVNPHTHQLKICDFGS 286 (492)
Q Consensus 208 ~~~~lV~E~~~~~-l~~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~yLH~~~givHrDlKp~NILl~~~~~~vkL~DFG~ 286 (492)
..++|+||+.++ +.+.+.. ....++...+..++.||+.||+|||+ +||+||||||+|||++.++ .+||+|||+
T Consensus 82 -~~~~v~e~~~~g~l~~~l~~---~~~~~~~~~~~~~~~qi~~~L~~LH~-~~iiH~dlkp~Nill~~~~-~~kl~DfG~ 155 (316)
T cd05108 82 -TVQLITQLMPFGCLLDYVRE---HKDNIGSQYLLNWCVQIAKGMNYLEE-RRLVHRDLAARNVLVKTPQ-HVKITDFGL 155 (316)
T ss_pred -CceeeeecCCCCCHHHHHHh---ccccCCHHHHHHHHHHHHHHHHHHHh-cCeeccccchhheEecCCC-cEEEccccc
Confidence 256899999854 4444332 23457888889999999999999997 9999999999999999887 799999999
Q ss_pred ccccCCCCCCc---cceeccCccCchhhcCCCCCCcchhhHHHHHHHHHHHh-CCCCCCCCChHHHHHHHHHHhCCCCHH
Q 011138 287 AKMLVPGEPNI---SYICSRYYRAPELIFGATEYTTAIDMWSIGCVLAELLL-GQPLFPGESGVDQLVEIIKILGTPTRE 362 (492)
Q Consensus 287 a~~~~~~~~~~---~~~gt~~y~aPE~~~~~~~~~~~~DvwSlGvil~ell~-G~~pf~~~~~~~~~~~i~~~~g~p~~~ 362 (492)
++......... ...++..|+|||.+.+. .++.++|||||||++|||++ |..||.+....+ +..+...
T Consensus 156 a~~~~~~~~~~~~~~~~~~~~y~apE~~~~~-~~~~~~Di~slGv~l~el~t~g~~p~~~~~~~~-~~~~~~~------- 226 (316)
T cd05108 156 AKLLGADEKEYHAEGGKVPIKWMALESILHR-IYTHQSDVWSYGVTVWELMTFGSKPYDGIPASE-ISSILEK------- 226 (316)
T ss_pred cccccCCCcceeccCCccceeecChHHhccC-CCCchhhhHHHHHHHHHHHcCCCCCCCCCCHHH-HHHHHhC-------
Confidence 98764433222 22346689999998654 48999999999999999997 999998765433 2333221
Q ss_pred HHhhcCCCCcccCCCcccCCCcccccCCCCChhHhhhhccccccCCCCcCCHHHhhCC
Q 011138 363 EIKCMNPNYTEFKFPQIKAHPWHKIFHKRMPPEALDLVSRLLQYSPSLRCTALEACAH 420 (492)
Q Consensus 363 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~Li~~~L~~dP~~R~t~~e~l~H 420 (492)
...++ .+...+.++.+++.+||..||.+||++.+++.+
T Consensus 227 ----------~~~~~----------~~~~~~~~~~~li~~cl~~~p~~Rps~~~l~~~ 264 (316)
T cd05108 227 ----------GERLP----------QPPICTIDVYMIMVKCWMIDADSRPKFRELIIE 264 (316)
T ss_pred ----------CCCCC----------CCCCCCHHHHHHHHHHccCChhhCcCHHHHHHH
Confidence 01111 112357889999999999999999999999986
No 294
>cd06627 STKc_Cdc7_like Catalytic domain of Cell division control protein 7-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), (Cdc7)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Cdc7-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily include Schizosaccharomyces pombe Cdc7, Saccharomyces cerevisiae Cdc15, Arabidopsis thaliana mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) epsilon, and related proteins. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Fission yeast
Probab=100.00 E-value=1.8e-38 Score=304.56 Aligned_cols=246 Identities=34% Similarity=0.558 Sum_probs=201.2
Q ss_pred ceeEeeeeccCCceEEEEEEEcCCCCEEEEEEeccch------hhHHHHHHHHHHcCCCCccccceeeeeccCCCceEEE
Q 011138 138 SYMAERVVGTGSFGVVFQAKCLETGDSVAIKKVLQDK------RYKNRELQIMRLLNHPNVVSLKHCFFSTTEKDELYLN 211 (492)
Q Consensus 138 ~y~~~~~lG~G~fg~Vy~~~~~~~g~~vAiK~~~~~~------~~~~~E~~il~~l~h~nIv~l~~~~~~~~~~~~~~~~ 211 (492)
+|.+.+.||+|+||.||++.+..+++.|++|.+.... ....+|+++++.++|+||+++++++. +..+.+
T Consensus 1 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~-----~~~~~~ 75 (254)
T cd06627 1 NYQLGDLIGRGAFGVVYKGLNLETGDFVAIKQISLEKIKEEALKSIMQEIDLLKNLKHPNIVKYIGSIE-----TSDSLY 75 (254)
T ss_pred CceeeeEEcccCCeEEEEEEEcCCCcEEEEEEecccccCHHHHHHHHHHHHHHHhCCCCCccEEEEEEE-----eCCEEE
Confidence 4888999999999999999999999999999885443 23457999999999999999999873 345688
Q ss_pred EEeeechhh-HHHHhhhhhhcCCCcCHHHHHHHHHHHHHHHHHHHhhCCcccCCCCCCceEEcCCCCcEEEeeecCcccc
Q 011138 212 LVLEYISET-VYRVSKHYTRMNQHVPILYVQLYTYQICRALNYLHHVVGVCHRDIKPQNLLVNPHTHQLKICDFGSAKML 290 (492)
Q Consensus 212 lV~E~~~~~-l~~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~yLH~~~givHrDlKp~NILl~~~~~~vkL~DFG~a~~~ 290 (492)
+||||+++. +.+.+.. ...+++..+..++.|++.||.|||+ .||+||||||+||+++.++ .++|+|||.+...
T Consensus 76 ~v~e~~~~~~L~~~~~~----~~~l~~~~~~~~~~~i~~~l~~lH~-~~i~H~dl~p~ni~i~~~~-~~~l~d~~~~~~~ 149 (254)
T cd06627 76 IILEYAENGSLRQIIKK----FGPFPESLVAVYVYQVLQGLAYLHE-QGVIHRDIKAANILTTKDG-VVKLADFGVATKL 149 (254)
T ss_pred EEEecCCCCcHHHHHHh----ccCCCHHHHHHHHHHHHHHHHHHhh-CCcccCCCCHHHEEECCCC-CEEEeccccceec
Confidence 999999874 4333322 2568899999999999999999997 9999999999999999877 8999999999876
Q ss_pred CCCCC-CccceeccCccCchhhcCCCCCCcchhhHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCCHHHHhhcCC
Q 011138 291 VPGEP-NISYICSRYYRAPELIFGATEYTTAIDMWSIGCVLAELLLGQPLFPGESGVDQLVEIIKILGTPTREEIKCMNP 369 (492)
Q Consensus 291 ~~~~~-~~~~~gt~~y~aPE~~~~~~~~~~~~DvwSlGvil~ell~G~~pf~~~~~~~~~~~i~~~~g~p~~~~~~~~~~ 369 (492)
..... .....++..|+|||.+.+.. ++.++||||+|+++|+|++|..||...+.......+...
T Consensus 150 ~~~~~~~~~~~~~~~y~~pe~~~~~~-~~~~~Dv~~lG~~l~~l~~g~~p~~~~~~~~~~~~~~~~-------------- 214 (254)
T cd06627 150 NDVSKDDASVVGTPYWMAPEVIEMSG-ASTASDIWSLGCTVIELLTGNPPYYDLNPMAALFRIVQD-------------- 214 (254)
T ss_pred CCCcccccccccchhhcCHhhhcCCC-CCcchhHHHHHHHHHHHHhCCCCCCCccHHHHHHHHhcc--------------
Confidence 44332 23457889999999986554 889999999999999999999999876654444333210
Q ss_pred CCcccCCCcccCCCcccccCCCCChhHhhhhccccccCCCCcCCHHHhhCCCCC
Q 011138 370 NYTEFKFPQIKAHPWHKIFHKRMPPEALDLVSRLLQYSPSLRCTALEACAHPFF 423 (492)
Q Consensus 370 ~~~~~~~~~~~~~~~~~~~~~~~s~~~~~Li~~~L~~dP~~R~t~~e~l~Hp~f 423 (492)
.. ..++..+++.+.++|.+||..||++|||+.+++.||||
T Consensus 215 -----~~---------~~~~~~~~~~~~~~i~~~l~~~p~~R~~~~~~l~~~~~ 254 (254)
T cd06627 215 -----DH---------PPLPEGISPELKDFLMQCFQKDPNLRPTAKQLLKHPWI 254 (254)
T ss_pred -----CC---------CCCCCCCCHHHHHHHHHHHhCChhhCcCHHHHhcCCCC
Confidence 00 01234578999999999999999999999999999998
No 295
>cd05090 PTKc_Ror1 Catalytic domain of the Protein Tyrosine Kinase, Receptor tyrosine kinase-like Orphan Receptor 1. Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor 1 (Ror1); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase cataly
Probab=100.00 E-value=6.4e-39 Score=313.81 Aligned_cols=248 Identities=21% Similarity=0.310 Sum_probs=191.4
Q ss_pred cceeEeeeeccCCceEEEEEEEc----CCCCEEEEEEeccch-----hhHHHHHHHHHHcCCCCccccceeeeeccCCCc
Q 011138 137 ISYMAERVVGTGSFGVVFQAKCL----ETGDSVAIKKVLQDK-----RYKNRELQIMRLLNHPNVVSLKHCFFSTTEKDE 207 (492)
Q Consensus 137 ~~y~~~~~lG~G~fg~Vy~~~~~----~~g~~vAiK~~~~~~-----~~~~~E~~il~~l~h~nIv~l~~~~~~~~~~~~ 207 (492)
..|++.+.||+|+||.||+|.+. .++..||+|.+.... ..+.+|+.+++.++||||+++++++. ..
T Consensus 5 ~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~-----~~ 79 (283)
T cd05090 5 SAVRFMEELGECAFGKIYKGHLYLPGMDHAQLVAIKTLKDINNPQQWGEFQQEASLMAELHHPNIVCLLGVVT-----QE 79 (283)
T ss_pred hhceeeeeccccCCcceEEEEEecCCCCCcceEEEEeccCCCCHHHHHHHHHHHHHHhhCCCCCeeeEEEEEe-----cC
Confidence 46889999999999999999853 456789999885321 34567999999999999999999873 33
Q ss_pred eEEEEEeeechhh-HHHHhhhhh-------------hcCCCcCHHHHHHHHHHHHHHHHHHHhhCCcccCCCCCCceEEc
Q 011138 208 LYLNLVLEYISET-VYRVSKHYT-------------RMNQHVPILYVQLYTYQICRALNYLHHVVGVCHRDIKPQNLLVN 273 (492)
Q Consensus 208 ~~~~lV~E~~~~~-l~~~~~~~~-------------~~~~~~~~~~~~~i~~qi~~aL~yLH~~~givHrDlKp~NILl~ 273 (492)
...|+||||+.++ +.+.+.... .....+++..+..++.||+.||.|||+ +||+||||||+|||++
T Consensus 80 ~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~i~~al~~lH~-~~i~H~dlkp~nili~ 158 (283)
T cd05090 80 QPVCMLFEYLNQGDLHEFLIMRSPHSDVGCSSDEDGTVKSSLDHGDFLHIAIQIAAGMEYLSS-HFFVHKDLAARNILIG 158 (283)
T ss_pred CceEEEEEcCCCCcHHHHHHhcCCCCccccccccccccccccCHHHHHHHHHHHHHHHHHHHh-cCeehhccccceEEEc
Confidence 4588999999864 444432111 112347788889999999999999997 9999999999999999
Q ss_pred CCCCcEEEeeecCccccCCCC---CCccceeccCccCchhhcCCCCCCcchhhHHHHHHHHHHHh-CCCCCCCCChHHHH
Q 011138 274 PHTHQLKICDFGSAKMLVPGE---PNISYICSRYYRAPELIFGATEYTTAIDMWSIGCVLAELLL-GQPLFPGESGVDQL 349 (492)
Q Consensus 274 ~~~~~vkL~DFG~a~~~~~~~---~~~~~~gt~~y~aPE~~~~~~~~~~~~DvwSlGvil~ell~-G~~pf~~~~~~~~~ 349 (492)
.++ .+||+|||+++...... ......++..|+|||.+.+. .++.++|||||||++|||++ |.+||.+.+..+..
T Consensus 159 ~~~-~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~-~~~~~~Dv~slG~il~el~~~g~~p~~~~~~~~~~ 236 (283)
T cd05090 159 EQL-HVKISDLGLSREIYSADYYRVQPKSLLPIRWMPPEAIMYG-KFSSDSDIWSFGVVLWEIFSFGLQPYYGFSNQEVI 236 (283)
T ss_pred CCC-cEEeccccccccccCCcceecccCCCccceecChHHhccC-CCCchhhhHHHHHHHHHHHcCCCCCCCCCCHHHHH
Confidence 877 79999999997653322 12234456789999998654 48999999999999999998 99999887654333
Q ss_pred HHHHHHhCCCCHHHHhhcCCCCcccCCCcccCCCcccccCCCCChhHhhhhccccccCCCCcCCHHHhhCC
Q 011138 350 VEIIKILGTPTREEIKCMNPNYTEFKFPQIKAHPWHKIFHKRMPPEALDLVSRLLQYSPSLRCTALEACAH 420 (492)
Q Consensus 350 ~~i~~~~g~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~Li~~~L~~dP~~R~t~~e~l~H 420 (492)
..+... . .. ..+..+++++.+++.+||+.||.+||++.+++++
T Consensus 237 ~~~~~~-~-----------------~~----------~~~~~~~~~~~~li~~cl~~~p~~Rp~~~~i~~~ 279 (283)
T cd05090 237 EMVRKR-Q-----------------LL----------PCSEDCPPRMYSLMTECWQEGPSRRPRFKDIHTR 279 (283)
T ss_pred HHHHcC-C-----------------cC----------CCCCCCCHHHHHHHHHHcccCcccCcCHHHHHHH
Confidence 332210 0 00 0123578899999999999999999999999864
No 296
>cd08229 STKc_Nek7 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 7. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 7 (Nek7) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek7 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek7 is required for mitotic spindle formation and cytokinesis. It is enriched in the centrosome and is critical for microtubule nucleation. Nek7 is activated by Nek9 during mitosis, and may regulate the p70 ribosomal S6 kinase.
Probab=100.00 E-value=8.5e-39 Score=309.89 Aligned_cols=250 Identities=29% Similarity=0.489 Sum_probs=194.7
Q ss_pred cceeEeeeeccCCceEEEEEEEcCCCCEEEEEEeccc-------hhhHHHHHHHHHHcCCCCccccceeeeeccCCCceE
Q 011138 137 ISYMAERVVGTGSFGVVFQAKCLETGDSVAIKKVLQD-------KRYKNRELQIMRLLNHPNVVSLKHCFFSTTEKDELY 209 (492)
Q Consensus 137 ~~y~~~~~lG~G~fg~Vy~~~~~~~g~~vAiK~~~~~-------~~~~~~E~~il~~l~h~nIv~l~~~~~~~~~~~~~~ 209 (492)
.+|.+.+.||+|+||.||+|.+..+|..||||.+... .....+|+.+++.++|+||++++++|. +..+
T Consensus 2 ~~y~~~~~ig~g~~g~v~~~~~~~~~~~~~vK~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~-----~~~~ 76 (267)
T cd08229 2 ANFRIEKKIGRGQFSEVYRATCLLDGVPVALKKVQIFDLMDAKARADCIKEIDLLKQLNHPNVIKYYASFI-----EDNE 76 (267)
T ss_pred chhhhhhhhcccCCeEEEEEeecCCCceEEEEeeeehhhhhHHHHHHHHHHHHHHHHccCCchhhhhheeE-----eCCe
Confidence 3588899999999999999999999999999977431 123457999999999999999999884 3346
Q ss_pred EEEEeeechh-hHHHHhhhhhhcCCCcCHHHHHHHHHHHHHHHHHHHhhCCcccCCCCCCceEEcCCCCcEEEeeecCcc
Q 011138 210 LNLVLEYISE-TVYRVSKHYTRMNQHVPILYVQLYTYQICRALNYLHHVVGVCHRDIKPQNLLVNPHTHQLKICDFGSAK 288 (492)
Q Consensus 210 ~~lV~E~~~~-~l~~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~yLH~~~givHrDlKp~NILl~~~~~~vkL~DFG~a~ 288 (492)
.++||||+.+ .+.+++.........+++..+..++.||+.||.|||+ +|++|+||||+||+++.++ .++|+|||++.
T Consensus 77 ~~~v~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~LH~-~~i~H~dl~p~nili~~~~-~~~l~dfg~~~ 154 (267)
T cd08229 77 LNIVLELADAGDLSRMIKHFKKQKRLIPEKTVWKYFVQLCSALEHMHS-RRVMHRDIKPANVFITATG-VVKLGDLGLGR 154 (267)
T ss_pred EEEEEEecCCCCHHHHHHHhhccCCCCCHHHHHHHHHHHHHHHHHHHH-CCeecCCCCHHHEEEcCCC-CEEECcchhhh
Confidence 8899999986 4555444434445668999999999999999999997 9999999999999999877 79999999987
Q ss_pred ccCCCCC-CccceeccCccCchhhcCCCCCCcchhhHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCCHHHHhhc
Q 011138 289 MLVPGEP-NISYICSRYYRAPELIFGATEYTTAIDMWSIGCVLAELLLGQPLFPGESGVDQLVEIIKILGTPTREEIKCM 367 (492)
Q Consensus 289 ~~~~~~~-~~~~~gt~~y~aPE~~~~~~~~~~~~DvwSlGvil~ell~G~~pf~~~~~~~~~~~i~~~~g~p~~~~~~~~ 367 (492)
....... .....|+..|+|||.+.+. .++.++|+|||||++|+|++|..||.+..... ..+.+.+
T Consensus 155 ~~~~~~~~~~~~~~~~~~~ape~~~~~-~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~--~~~~~~~----------- 220 (267)
T cd08229 155 FFSSKTTAAHSLVGTPYYMSPERIHEN-GYNFKSDIWSLGCLLYEMAALQSPFYGDKMNL--YSLCKKI----------- 220 (267)
T ss_pred ccccCCcccccccCCcCccCHHHhcCC-CccchhhHHHHHHHHHHHHhCCCCcccccchH--HHHhhhh-----------
Confidence 6543322 2245788999999998654 48899999999999999999999997644211 1111110
Q ss_pred CCCCcccCCCcccCCCcccccCCCCChhHhhhhccccccCCCCcCCHHHhhC
Q 011138 368 NPNYTEFKFPQIKAHPWHKIFHKRMPPEALDLVSRLLQYSPSLRCTALEACA 419 (492)
Q Consensus 368 ~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~Li~~~L~~dP~~R~t~~e~l~ 419 (492)
....++.. ....+++++++||.+||..||.+|||+.++++
T Consensus 221 ----~~~~~~~~--------~~~~~~~~~~~li~~~l~~~p~~Rpt~~~i~~ 260 (267)
T cd08229 221 ----EQCDYPPL--------PSDHYSEELRQLVNMCINPDPEKRPDITYVYD 260 (267)
T ss_pred ----hcCCCCCC--------CcccccHHHHHHHHHhcCCCcccCCCHHHHHH
Confidence 00011110 11346889999999999999999999997753
No 297
>KOG0695 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=4.8e-39 Score=300.53 Aligned_cols=258 Identities=26% Similarity=0.475 Sum_probs=209.9
Q ss_pred CCccccceeEeeeeccCCceEEEEEEEcCCCCEEEEEEeccc-------hhhHHHHHHHHHHc-CCCCccccceeeeecc
Q 011138 132 QPKQTISYMAERVVGTGSFGVVFQAKCLETGDSVAIKKVLQD-------KRYKNRELQIMRLL-NHPNVVSLKHCFFSTT 203 (492)
Q Consensus 132 ~~~~~~~y~~~~~lG~G~fg~Vy~~~~~~~g~~vAiK~~~~~-------~~~~~~E~~il~~l-~h~nIv~l~~~~~~~~ 203 (492)
+.....+|.+.++||+|+|..|.+++.++|.+.||+|++++. ....+.|..+..+- +||.+|-++.||
T Consensus 245 ~~l~l~df~ll~vigrgsyakvl~~~~~~t~qiyamkvvkkel~nddedidwvqtek~vfe~asn~pflvglhscf---- 320 (593)
T KOG0695|consen 245 QGLGLQDFDLLRVIGRGSYAKVLLVRLKKTDQIYAMKVVKKELVNDDEDIDWVQTEKHVFEQASNNPFLVGLHSCF---- 320 (593)
T ss_pred cccccccceeeeeecCcchhhhhheehcccceeeehhhHHHHhcCCcccchhHHhhHHHHHhccCCCeEEehhhhh----
Confidence 334455799999999999999999999999999999988653 22345677777655 699999999999
Q ss_pred CCCceEEEEEeeechhhHHHHhhhhhhcCCCcCHHHHHHHHHHHHHHHHHHHhhCCcccCCCCCCceEEcCCCCcEEEee
Q 011138 204 EKDELYLNLVLEYISETVYRVSKHYTRMNQHVPILYVQLYTYQICRALNYLHHVVGVCHRDIKPQNLLVNPHTHQLKICD 283 (492)
Q Consensus 204 ~~~~~~~~lV~E~~~~~l~~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~yLH~~~givHrDlKp~NILl~~~~~~vkL~D 283 (492)
+....+++|.||++|+-+ +.+.. ....+|+..+++|...|+.||.|||+ +|||+||||.+|||+|..+ .+||+|
T Consensus 321 -qtesrlffvieyv~ggdl--mfhmq-rqrklpeeharfys~ei~lal~flh~-rgiiyrdlkldnvlldaeg-hikltd 394 (593)
T KOG0695|consen 321 -QTESRLFFVIEYVNGGDL--MFHMQ-RQRKLPEEHARFYSAEICLALNFLHE-RGIIYRDLKLDNVLLDAEG-HIKLTD 394 (593)
T ss_pred -cccceEEEEEEEecCcce--eeehh-hhhcCcHHHhhhhhHHHHHHHHHHhh-cCeeeeeccccceEEccCC-ceeecc
Confidence 566679999999998733 33333 35679999999999999999999997 9999999999999999999 599999
Q ss_pred ecCcccc-CCCCCCccceeccCccCchhhcCCCCCCcchhhHHHHHHHHHHHhCCCCCCC-------CChHHHHHHHHHH
Q 011138 284 FGSAKML-VPGEPNISYICSRYYRAPELIFGATEYTTAIDMWSIGCVLAELLLGQPLFPG-------ESGVDQLVEIIKI 355 (492)
Q Consensus 284 FG~a~~~-~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DvwSlGvil~ell~G~~pf~~-------~~~~~~~~~i~~~ 355 (492)
+|+++.- .++....+++|||.|+|||++.|.. |+..+|+|+|||+++||+.|+.||+- .+..+.+.+++-.
T Consensus 395 ygmcke~l~~gd~tstfcgtpnyiapeilrgee-ygfsvdwwalgvlmfemmagrspfdivgm~n~d~ntedylfqvile 473 (593)
T KOG0695|consen 395 YGMCKEGLGPGDTTSTFCGTPNYIAPEILRGEE-YGFSVDWWALGVLMFEMMAGRSPFDIVGMDNPDMNTEDYLFQVILE 473 (593)
T ss_pred cchhhcCCCCCcccccccCCCcccchhhhcccc-cCceehHHHHHHHHHHHHcCCCCcceecCCCcccchhHHHHHHHhh
Confidence 9998764 4566677899999999999997765 99999999999999999999999952 3344455554321
Q ss_pred hCCCCHHHHhhcCCCCcccCCCcccCCCcccccCCCCChhHhhhhccccccCCCCcCC------HHHhhCCCCCCCCCC
Q 011138 356 LGTPTREEIKCMNPNYTEFKFPQIKAHPWHKIFHKRMPPEALDLVSRLLQYSPSLRCT------ALEACAHPFFDDLRD 428 (492)
Q Consensus 356 ~g~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~Li~~~L~~dP~~R~t------~~e~l~Hp~f~~~~~ 428 (492)
..+.+| ..+|-.+..+++..|.+||.+|.. ..++..|+||+.+..
T Consensus 474 ----------------kqirip------------rslsvkas~vlkgflnkdp~erlgc~~~~g~~dik~h~ffr~idw 524 (593)
T KOG0695|consen 474 ----------------KQIRIP------------RSLSVKASHVLKGFLNKDPKERLGCRPQTGFSDIKSHAFFRSIDW 524 (593)
T ss_pred ----------------hccccc------------ceeehhhHHHHHHhhcCCcHHhcCCCcccchhhhhcchhhhhCCH
Confidence 122222 346677889999999999999984 679999999997654
No 298
>cd05093 PTKc_TrkB Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase B. Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase B (TrkB); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkB is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkB to its ligands, brain-derived neurotrophic factor (BDNF) or neurotrophin 4 (NT4), results in receptor oligomerization and activation of the catalytic domain. TrkB is broadly
Probab=100.00 E-value=1.3e-38 Score=312.53 Aligned_cols=247 Identities=24% Similarity=0.333 Sum_probs=192.7
Q ss_pred cceeEeeeeccCCceEEEEEEEc-----CCCCEEEEEEeccch----hhHHHHHHHHHHcCCCCccccceeeeeccCCCc
Q 011138 137 ISYMAERVVGTGSFGVVFQAKCL-----ETGDSVAIKKVLQDK----RYKNRELQIMRLLNHPNVVSLKHCFFSTTEKDE 207 (492)
Q Consensus 137 ~~y~~~~~lG~G~fg~Vy~~~~~-----~~g~~vAiK~~~~~~----~~~~~E~~il~~l~h~nIv~l~~~~~~~~~~~~ 207 (492)
.+|.+.+.||+|+||.||++.+. .++..+|+|.+.... ....+|+.+++.++||||+++++++ ...
T Consensus 5 ~~~~~~~~lg~G~~~~v~~~~~~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~-----~~~ 79 (288)
T cd05093 5 HNIVLKRELGEGAFGKVFLAECYNLCPEQDKILVAVKTLKDASDNARKDFHREAELLTNLQHEHIVKFYGVC-----VEG 79 (288)
T ss_pred HHeeeccccCCcCCeeEEeeEeccCCCCCcceEEEEEecCCcCHHHHHHHHHHHHHHHhCCCCCcceEEEEE-----ecC
Confidence 46999999999999999999853 345679999885432 2356799999999999999999988 344
Q ss_pred eEEEEEeeechhh-HHHHhhhhh---------hcCCCcCHHHHHHHHHHHHHHHHHHHhhCCcccCCCCCCceEEcCCCC
Q 011138 208 LYLNLVLEYISET-VYRVSKHYT---------RMNQHVPILYVQLYTYQICRALNYLHHVVGVCHRDIKPQNLLVNPHTH 277 (492)
Q Consensus 208 ~~~~lV~E~~~~~-l~~~~~~~~---------~~~~~~~~~~~~~i~~qi~~aL~yLH~~~givHrDlKp~NILl~~~~~ 277 (492)
.++++||||+.++ +...+.... .....+++..+..++.||+.||+|||+ +||+||||||+|||++.++
T Consensus 80 ~~~~lv~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~l~~~~~~~~~~ql~~aL~~lH~-~~i~H~dlkp~Nili~~~~- 157 (288)
T cd05093 80 DPLIMVFEYMKHGDLNKFLRAHGPDAVLMAEGNRPAELTQSQMLHIAQQIAAGMVYLAS-QHFVHRDLATRNCLVGENL- 157 (288)
T ss_pred CccEEEEEcCCCCCHHHHHHHcCCccccccccCCCCCCCHHHHHHHHHHHHHHHHHHHh-CCeeecccCcceEEEccCC-
Confidence 4689999999854 444433211 112348899999999999999999997 9999999999999999887
Q ss_pred cEEEeeecCccccCCCCC---CccceeccCccCchhhcCCCCCCcchhhHHHHHHHHHHHh-CCCCCCCCChHHHHHHHH
Q 011138 278 QLKICDFGSAKMLVPGEP---NISYICSRYYRAPELIFGATEYTTAIDMWSIGCVLAELLL-GQPLFPGESGVDQLVEII 353 (492)
Q Consensus 278 ~vkL~DFG~a~~~~~~~~---~~~~~gt~~y~aPE~~~~~~~~~~~~DvwSlGvil~ell~-G~~pf~~~~~~~~~~~i~ 353 (492)
.+||+|||+++....... .....++..|+|||++.+. .++.++|||||||++|+|++ |.+||......+.+..+.
T Consensus 158 ~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~-~~~~~sDiwslG~il~~l~t~g~~p~~~~~~~~~~~~i~ 236 (288)
T cd05093 158 LVKIGDFGMSRDVYSTDYYRVGGHTMLPIRWMPPESIMYR-KFTTESDVWSLGVVLWEIFTYGKQPWYQLSNNEVIECIT 236 (288)
T ss_pred cEEeccCCccccccCCceeecCCCCCccccccCHHHhccC-CCCchhhHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHH
Confidence 799999999976533221 1223457789999998654 58999999999999999998 999998877655554443
Q ss_pred HHhCCCCHHHHhhcCCCCcccCCCcccCCCcccccCCCCChhHhhhhccccccCCCCcCCHHHhhC
Q 011138 354 KILGTPTREEIKCMNPNYTEFKFPQIKAHPWHKIFHKRMPPEALDLVSRLLQYSPSLRCTALEACA 419 (492)
Q Consensus 354 ~~~g~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~Li~~~L~~dP~~R~t~~e~l~ 419 (492)
.. . .+. .+..++.++.+|+.+||+.||.+|||+.+++.
T Consensus 237 ~~--~-----------------~~~---------~~~~~~~~l~~li~~~l~~~p~~Rpt~~~v~~ 274 (288)
T cd05093 237 QG--R-----------------VLQ---------RPRTCPKEVYDLMLGCWQREPHMRLNIKEIHS 274 (288)
T ss_pred cC--C-----------------cCC---------CCCCCCHHHHHHHHHHccCChhhCCCHHHHHH
Confidence 21 0 000 11246789999999999999999999999854
No 299
>cd05113 PTKc_Btk_Bmx Catalytic domain of the Protein Tyrosine Kinases, Bruton's tyrosine kinase and Bone marrow kinase on the X chromosome. Protein Tyrosine Kinase (PTK) family; Bruton's tyrosine kinase (Btk) and Bone marrow kinase on the X chromosome (Bmx); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Btk and Bmx (also named Etk) are members of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds
Probab=100.00 E-value=9.6e-39 Score=308.10 Aligned_cols=244 Identities=19% Similarity=0.277 Sum_probs=191.4
Q ss_pred cceeEeeeeccCCceEEEEEEEcCCCCEEEEEEeccch---hhHHHHHHHHHHcCCCCccccceeeeeccCCCceEEEEE
Q 011138 137 ISYMAERVVGTGSFGVVFQAKCLETGDSVAIKKVLQDK---RYKNRELQIMRLLNHPNVVSLKHCFFSTTEKDELYLNLV 213 (492)
Q Consensus 137 ~~y~~~~~lG~G~fg~Vy~~~~~~~g~~vAiK~~~~~~---~~~~~E~~il~~l~h~nIv~l~~~~~~~~~~~~~~~~lV 213 (492)
.+|.+.+.||+|+||.||.|.+.. +..+|||.+.... ....+|+.+++.++||||+++++++ .....+++|
T Consensus 4 ~~~~~~~~lg~G~~~~vy~~~~~~-~~~~aik~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~-----~~~~~~~lv 77 (256)
T cd05113 4 KDLTFLKELGTGQFGVVKYGKWRG-QYDVAIKMIKEGSMSEDEFIEEAKVMMKLSHEKLVQLYGVC-----TKQRPIYIV 77 (256)
T ss_pred HHeEEeeEecCcccceEEEEEecC-CCcEEEEEcCCCcccHHHHHHHHHHHhcCCCCCeeeEEEEE-----ccCCCcEEE
Confidence 359999999999999999998754 4569999876432 3456799999999999999999988 333457899
Q ss_pred eeechhh-HHHHhhhhhhcCCCcCHHHHHHHHHHHHHHHHHHHhhCCcccCCCCCCceEEcCCCCcEEEeeecCccccCC
Q 011138 214 LEYISET-VYRVSKHYTRMNQHVPILYVQLYTYQICRALNYLHHVVGVCHRDIKPQNLLVNPHTHQLKICDFGSAKMLVP 292 (492)
Q Consensus 214 ~E~~~~~-l~~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~yLH~~~givHrDlKp~NILl~~~~~~vkL~DFG~a~~~~~ 292 (492)
|||+.++ +.+.+.. ....+++..+..++.||+.||.|||+ +||+|+||||+|||++.++ .+||+|||+++....
T Consensus 78 ~e~~~~~~l~~~i~~---~~~~~~~~~~~~~~~~i~~~l~~lH~-~~i~H~dl~p~nili~~~~-~~kl~d~g~~~~~~~ 152 (256)
T cd05113 78 TEYMSNGCLLNYLRE---HGKRFQPSQLLEMCKDVCEGMAYLES-KQFIHRDLAARNCLVDDQG-CVKVSDFGLSRYVLD 152 (256)
T ss_pred EEcCCCCcHHHHHHh---cCCCCCHHHHHHHHHHHHHHHHHHHh-CCeeccccCcceEEEcCCC-CEEECCCccceecCC
Confidence 9999865 4443322 22368899999999999999999997 9999999999999999877 799999999876543
Q ss_pred CCCC--ccceeccCccCchhhcCCCCCCcchhhHHHHHHHHHHHh-CCCCCCCCChHHHHHHHHHHhCCCCHHHHhhcCC
Q 011138 293 GEPN--ISYICSRYYRAPELIFGATEYTTAIDMWSIGCVLAELLL-GQPLFPGESGVDQLVEIIKILGTPTREEIKCMNP 369 (492)
Q Consensus 293 ~~~~--~~~~gt~~y~aPE~~~~~~~~~~~~DvwSlGvil~ell~-G~~pf~~~~~~~~~~~i~~~~g~p~~~~~~~~~~ 369 (492)
.... ....++..|+|||.+.+. .++.++|||||||++|+|++ |..||...+..+....+......
T Consensus 153 ~~~~~~~~~~~~~~y~~pe~~~~~-~~~~~~Di~slG~~l~~l~~~g~~p~~~~~~~~~~~~~~~~~~~----------- 220 (256)
T cd05113 153 DEYTSSVGSKFPVRWSPPEVLLYS-KFSSKSDVWAFGVLMWEVYSLGKMPYERFNNSETVEKVSQGLRL----------- 220 (256)
T ss_pred CceeecCCCccChhhCCHHHHhcC-cccchhHHHHHHHHHHHHhcCCCCCcCcCCHHHHHHHHhcCCCC-----------
Confidence 3211 123456779999999654 48999999999999999998 99999877665544444331100
Q ss_pred CCcccCCCcccCCCcccccCCCCChhHhhhhccccccCCCCcCCHHHhhCC
Q 011138 370 NYTEFKFPQIKAHPWHKIFHKRMPPEALDLVSRLLQYSPSLRCTALEACAH 420 (492)
Q Consensus 370 ~~~~~~~~~~~~~~~~~~~~~~~s~~~~~Li~~~L~~dP~~R~t~~e~l~H 420 (492)
. .+...++.+++++.+||..||.+||++.+++.+
T Consensus 221 -----~------------~~~~~~~~~~~li~~cl~~~p~~Rp~~~~ll~~ 254 (256)
T cd05113 221 -----Y------------RPHLASEKVYAIMYSCWHEKAEERPTFQQLLSS 254 (256)
T ss_pred -----C------------CCCCCCHHHHHHHHHHcCCCcccCCCHHHHHHh
Confidence 0 112357899999999999999999999999864
No 300
>cd05091 PTKc_Ror2 Catalytic domain of the Protein Tyrosine Kinase, Receptor tyrosine kinase-like Orphan Receptor 2. Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor 2 (Ror2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase cataly
Probab=100.00 E-value=4.3e-39 Score=314.90 Aligned_cols=247 Identities=21% Similarity=0.265 Sum_probs=192.4
Q ss_pred cceeEeeeeccCCceEEEEEEEcCC-----CCEEEEEEeccch-----hhHHHHHHHHHHcCCCCccccceeeeeccCCC
Q 011138 137 ISYMAERVVGTGSFGVVFQAKCLET-----GDSVAIKKVLQDK-----RYKNRELQIMRLLNHPNVVSLKHCFFSTTEKD 206 (492)
Q Consensus 137 ~~y~~~~~lG~G~fg~Vy~~~~~~~-----g~~vAiK~~~~~~-----~~~~~E~~il~~l~h~nIv~l~~~~~~~~~~~ 206 (492)
..|.+.+.||+|+||.||+|.+..+ +..||||++.... ..+.+|+.+++.++||||+++++++ ..
T Consensus 5 ~~~~~~~~lg~G~~g~V~~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~~~~l~h~~iv~~~~~~-----~~ 79 (283)
T cd05091 5 STVRFMEELGEDRFGKVYKGHLFGTAPGEQTQAVAIKTLKDKAEGPLREEFKHEAMMRSRLQHPNIVCLLGVV-----TK 79 (283)
T ss_pred HHHHHHHHhCCCCCCeEEEEEEecCCCCCceeEEEEEEccCCCCHHHHHHHHHHHHHHhcCCCCCcCeEEEEE-----cC
Confidence 3588899999999999999987543 5789999986432 2345799999999999999999988 33
Q ss_pred ceEEEEEeeechhh-HHHHhhhh------------hhcCCCcCHHHHHHHHHHHHHHHHHHHhhCCcccCCCCCCceEEc
Q 011138 207 ELYLNLVLEYISET-VYRVSKHY------------TRMNQHVPILYVQLYTYQICRALNYLHHVVGVCHRDIKPQNLLVN 273 (492)
Q Consensus 207 ~~~~~lV~E~~~~~-l~~~~~~~------------~~~~~~~~~~~~~~i~~qi~~aL~yLH~~~givHrDlKp~NILl~ 273 (492)
....++++||+.++ +...+... ......+++..+..++.|++.||.|||+ +||+||||||+|||++
T Consensus 80 ~~~~~~~~e~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ql~~aL~~lH~-~gi~H~dlkp~Nil~~ 158 (283)
T cd05091 80 EQPLSMIFSYCSHSDLHEFLVMRSPHSDVGSTDDDKTVKSTLEPADFVHIVTQIAAGMEFLSS-HHVVHKDLATRNVLVF 158 (283)
T ss_pred CCceEEEEEcCCCCcHHHHHHhcCCCccccccccccccccccCHHHHHHHHHHHHHHHHHHHH-cCccccccchhheEec
Confidence 44588999999854 43333211 1112357888899999999999999997 9999999999999999
Q ss_pred CCCCcEEEeeecCccccCCCCC---CccceeccCccCchhhcCCCCCCcchhhHHHHHHHHHHHh-CCCCCCCCChHHHH
Q 011138 274 PHTHQLKICDFGSAKMLVPGEP---NISYICSRYYRAPELIFGATEYTTAIDMWSIGCVLAELLL-GQPLFPGESGVDQL 349 (492)
Q Consensus 274 ~~~~~vkL~DFG~a~~~~~~~~---~~~~~gt~~y~aPE~~~~~~~~~~~~DvwSlGvil~ell~-G~~pf~~~~~~~~~ 349 (492)
.++ .+||+|||+++....... .....+++.|+|||.+.+.. ++.++|||||||++|||++ |..||.+....+.+
T Consensus 159 ~~~-~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~-~~~~~Dv~slG~~l~el~~~g~~p~~~~~~~~~~ 236 (283)
T cd05091 159 DKL-NVKISDLGLFREVYAADYYKLMGNSLLPIRWMSPEAIMYGK-FSIDSDIWSYGVVLWEVFSYGLQPYCGYSNQDVI 236 (283)
T ss_pred CCC-ceEecccccccccccchheeeccCccCCccccCHHHHhcCC-CCcchhHHHHHHHHHHHHcCCCCCCCCCCHHHHH
Confidence 777 799999999876533221 12334577899999986544 8999999999999999998 89999887765555
Q ss_pred HHHHHHhCCCCHHHHhhcCCCCcccCCCcccCCCcccccCCCCChhHhhhhccccccCCCCcCCHHHhhC
Q 011138 350 VEIIKILGTPTREEIKCMNPNYTEFKFPQIKAHPWHKIFHKRMPPEALDLVSRLLQYSPSLRCTALEACA 419 (492)
Q Consensus 350 ~~i~~~~g~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~Li~~~L~~dP~~R~t~~e~l~ 419 (492)
..+.... .. .++..++.++.+|+.+||+.||.+||++.++++
T Consensus 237 ~~i~~~~-------------------~~---------~~~~~~~~~~~~li~~cl~~~p~~RP~~~~i~~ 278 (283)
T cd05091 237 EMIRNRQ-------------------VL---------PCPDDCPAWVYTLMLECWNEFPSRRPRFKDIHS 278 (283)
T ss_pred HHHHcCC-------------------cC---------CCCCCCCHHHHHHHHHHhCCCcccCCCHHHHHH
Confidence 4443310 00 012357889999999999999999999999986
No 301
>cd00192 PTKc Catalytic domain of Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family, catalytic domain. This PTKc family is part of a larger superfamily that includes the catalytic domains of protein serine/threonine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. They can be classified into receptor and non-receptor tyr kinases. PTKs play important roles in many cellular processes including, lymphocyte activation, epithelium growth and maintenance, metabolism control, organogenesis regulation, survival, proliferation, differentiation, migration, adhesion, motility, and morphogenesis. Receptor tyr kinases (RTKs) are integral membrane proteins which contain an extracellular ligand-binding region, a transmembrane segment, and an intracellular tyr kinase domain. RTKs are usually activated through ligan
Probab=100.00 E-value=1.8e-38 Score=305.60 Aligned_cols=242 Identities=27% Similarity=0.383 Sum_probs=194.3
Q ss_pred eeeccCCceEEEEEEEcCC---CCEEEEEEeccch-----hhHHHHHHHHHHcCCCCccccceeeeeccCCCceEEEEEe
Q 011138 143 RVVGTGSFGVVFQAKCLET---GDSVAIKKVLQDK-----RYKNRELQIMRLLNHPNVVSLKHCFFSTTEKDELYLNLVL 214 (492)
Q Consensus 143 ~~lG~G~fg~Vy~~~~~~~---g~~vAiK~~~~~~-----~~~~~E~~il~~l~h~nIv~l~~~~~~~~~~~~~~~~lV~ 214 (492)
+.||+|+||.||+|.+... +..||+|.+.... ....+|+.+++.++|+||+++++++. +...+++||
T Consensus 1 ~~ig~g~~g~v~~~~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~-----~~~~~~lv~ 75 (262)
T cd00192 1 KKLGEGAFGEVYKGKLKGKDGKTTEVAVKTLKEDASEEERKDFLKEARVMKKLGHPNVVRLLGVCT-----EEEPLYLVL 75 (262)
T ss_pred CccccCCceEEEEEEEecCCCCCceEEeEeeccccchhHHHHHHHHHHHHhhcCCCChheeeeeec-----CCCceEEEE
Confidence 3699999999999999866 8999999886542 34557999999999999999999883 345689999
Q ss_pred eech-hhHHHHhhhhhhc-----CCCcCHHHHHHHHHHHHHHHHHHHhhCCcccCCCCCCceEEcCCCCcEEEeeecCcc
Q 011138 215 EYIS-ETVYRVSKHYTRM-----NQHVPILYVQLYTYQICRALNYLHHVVGVCHRDIKPQNLLVNPHTHQLKICDFGSAK 288 (492)
Q Consensus 215 E~~~-~~l~~~~~~~~~~-----~~~~~~~~~~~i~~qi~~aL~yLH~~~givHrDlKp~NILl~~~~~~vkL~DFG~a~ 288 (492)
||+. +.+.+.+...... ...+++..+..++.||+.||+|||+ +||+||||||+||+++.++ .+||+|||.+.
T Consensus 76 e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~al~~lH~-~~i~H~di~p~nili~~~~-~~~l~dfg~~~ 153 (262)
T cd00192 76 EYMEGGDLLDYLRKSRPVFPSPEKSTLSLKDLLSFAIQIAKGMEYLAS-KKFVHRDLAARNCLVGEDL-VVKISDFGLSR 153 (262)
T ss_pred EeccCCcHHHHHhhccccccccccccCCHHHHHHHHHHHHHHHHHHHc-CCcccCccCcceEEECCCC-cEEEccccccc
Confidence 9996 4555544432111 3678999999999999999999997 9999999999999999887 79999999998
Q ss_pred ccCCCC---CCccceeccCccCchhhcCCCCCCcchhhHHHHHHHHHHHh-CCCCCCCCChHHHHHHHHHHhCCCCHHHH
Q 011138 289 MLVPGE---PNISYICSRYYRAPELIFGATEYTTAIDMWSIGCVLAELLL-GQPLFPGESGVDQLVEIIKILGTPTREEI 364 (492)
Q Consensus 289 ~~~~~~---~~~~~~gt~~y~aPE~~~~~~~~~~~~DvwSlGvil~ell~-G~~pf~~~~~~~~~~~i~~~~g~p~~~~~ 364 (492)
...... ......++..|+|||.+.+. .++.++|||||||++|+|++ |..||......+....+...
T Consensus 154 ~~~~~~~~~~~~~~~~~~~y~aPE~~~~~-~~~~~~Di~slG~il~~l~~~g~~p~~~~~~~~~~~~~~~~--------- 223 (262)
T cd00192 154 DVYDDDYYRKKTGGKLPIRWMAPESLKDG-IFTSKSDVWSFGVLLWEIFTLGATPYPGLSNEEVLEYLRKG--------- 223 (262)
T ss_pred ccccccccccccCCCcCccccCHHHhccC-CcchhhccHHHHHHHHHHHhcCCCCCCCCCHHHHHHHHHcC---------
Confidence 764432 23345678899999998655 58999999999999999998 69999887655444443220
Q ss_pred hhcCCCCcccCCCcccCCCcccccCCCCChhHhhhhccccccCCCCcCCHHHhhCC
Q 011138 365 KCMNPNYTEFKFPQIKAHPWHKIFHKRMPPEALDLVSRLLQYSPSLRCTALEACAH 420 (492)
Q Consensus 365 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~Li~~~L~~dP~~R~t~~e~l~H 420 (492)
. ....+..+++++.+++.+||..||.+||++.|+++|
T Consensus 224 -------~------------~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~l~~~ 260 (262)
T cd00192 224 -------Y------------RLPKPEYCPDELYELMLSCWQLDPEDRPTFSELVER 260 (262)
T ss_pred -------C------------CCCCCccCChHHHHHHHHHccCCcccCcCHHHHHHh
Confidence 0 001223568999999999999999999999999875
No 302
>cd05072 PTKc_Lyn Catalytic domain of the Protein Tyrosine Kinase, Lyn. Protein Tyrosine Kinase (PTK) family; Lyn kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Lyn is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine and growth fa
Probab=100.00 E-value=1.2e-38 Score=307.91 Aligned_cols=245 Identities=24% Similarity=0.344 Sum_probs=192.9
Q ss_pred ccceeEeeeeccCCceEEEEEEEcCCCCEEEEEEeccch---hhHHHHHHHHHHcCCCCccccceeeeeccCCCceEEEE
Q 011138 136 TISYMAERVVGTGSFGVVFQAKCLETGDSVAIKKVLQDK---RYKNRELQIMRLLNHPNVVSLKHCFFSTTEKDELYLNL 212 (492)
Q Consensus 136 ~~~y~~~~~lG~G~fg~Vy~~~~~~~g~~vAiK~~~~~~---~~~~~E~~il~~l~h~nIv~l~~~~~~~~~~~~~~~~l 212 (492)
..+|++.+.||+|+||.||+|.+. ++..||+|.+.... ....+|+.+++.++|+||+++++++ .+....++
T Consensus 5 ~~~~~~~~~lg~g~~g~v~~~~~~-~~~~v~iK~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~-----~~~~~~~l 78 (261)
T cd05072 5 RESIKLVKKLGAGQFGEVWMGYYN-NSTKVAVKTLKPGTMSVQAFLEEANLMKTLQHDKLVRLYAVV-----TKEEPIYI 78 (261)
T ss_pred hHHeEEeeecCCcCCceEEEEEec-CCceEEEEEccCCchhHHHHHHHHHHHHhCCCCCeeeEEEEE-----cCCCCcEE
Confidence 356999999999999999999864 56789999875432 3455799999999999999999887 44455889
Q ss_pred Eeeechh-hHHHHhhhhhhcCCCcCHHHHHHHHHHHHHHHHHHHhhCCcccCCCCCCceEEcCCCCcEEEeeecCccccC
Q 011138 213 VLEYISE-TVYRVSKHYTRMNQHVPILYVQLYTYQICRALNYLHHVVGVCHRDIKPQNLLVNPHTHQLKICDFGSAKMLV 291 (492)
Q Consensus 213 V~E~~~~-~l~~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~yLH~~~givHrDlKp~NILl~~~~~~vkL~DFG~a~~~~ 291 (492)
||||+.+ .+.+.+.. .....+++..+..++.||+.||.|||+ .|++||||||+||+++.++ .+||+|||++....
T Consensus 79 v~e~~~~~~L~~~l~~--~~~~~~~~~~~~~~~~~l~~~l~~LH~-~~i~H~dl~p~nili~~~~-~~~l~dfg~~~~~~ 154 (261)
T cd05072 79 ITEYMAKGSLLDFLKS--DEGGKVLLPKLIDFSAQIAEGMAYIER-KNYIHRDLRAANVLVSESL-MCKIADFGLARVIE 154 (261)
T ss_pred EEecCCCCcHHHHHHH--hcCCCCCHHHHHHHHHHHHHHHHHHHH-CCeeccccchhhEEecCCC-cEEECCCccceecC
Confidence 9999975 45444332 223567888889999999999999997 9999999999999999887 79999999998654
Q ss_pred CCCC--CccceeccCccCchhhcCCCCCCcchhhHHHHHHHHHHHh-CCCCCCCCChHHHHHHHHHHhCCCCHHHHhhcC
Q 011138 292 PGEP--NISYICSRYYRAPELIFGATEYTTAIDMWSIGCVLAELLL-GQPLFPGESGVDQLVEIIKILGTPTREEIKCMN 368 (492)
Q Consensus 292 ~~~~--~~~~~gt~~y~aPE~~~~~~~~~~~~DvwSlGvil~ell~-G~~pf~~~~~~~~~~~i~~~~g~p~~~~~~~~~ 368 (492)
.... .....++..|+|||.+.+. .++.++|||||||++|+|++ |..||......+....+...
T Consensus 155 ~~~~~~~~~~~~~~~y~aPE~~~~~-~~~~~~Di~slG~~l~~l~t~g~~p~~~~~~~~~~~~~~~~------------- 220 (261)
T cd05072 155 DNEYTAREGAKFPIKWTAPEAINFG-SFTIKSDVWSFGILLYEIVTYGKIPYPGMSNSDVMSALQRG------------- 220 (261)
T ss_pred CCceeccCCCccceecCCHHHhccC-CCChhhhhhhhHHHHHHHHccCCCCCCCCCHHHHHHHHHcC-------------
Confidence 3221 1223456789999998654 48899999999999999998 99999887665544443221
Q ss_pred CCCcccCCCcccCCCcccccCCCCChhHhhhhccccccCCCCcCCHHHhhC
Q 011138 369 PNYTEFKFPQIKAHPWHKIFHKRMPPEALDLVSRLLQYSPSLRCTALEACA 419 (492)
Q Consensus 369 ~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~Li~~~L~~dP~~R~t~~e~l~ 419 (492)
...+ ....++.++.+|+.+||..||++||+++++.+
T Consensus 221 -----~~~~----------~~~~~~~~~~~li~~~l~~~p~~Rp~~~~i~~ 256 (261)
T cd05072 221 -----YRMP----------RMENCPDELYDIMKTCWKEKAEERPTFDYLQS 256 (261)
T ss_pred -----CCCC----------CCCCCCHHHHHHHHHHccCCcccCcCHHHHHH
Confidence 0111 11246889999999999999999999999864
No 303
>cd05032 PTKc_InsR_like Catalytic domain of Insulin Receptor-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Insulin Receptor (InsR) subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). The InsR subfamily is composed of InsR, Insulin-like Growth Factor-1 Receptor (IGF-1R), and similar proteins. PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. InsR and IGF-1R are receptor tyr kinases (RTKs) composed of two alphabeta heterodimers. Binding of the ligand (insulin, IGF-1, or IGF-2) to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, stimulating downstream kinase activities, which initiate signaling cascades and biological
Probab=100.00 E-value=1.4e-38 Score=310.04 Aligned_cols=248 Identities=24% Similarity=0.319 Sum_probs=193.2
Q ss_pred ccceeEeeeeccCCceEEEEEEEcCC-----CCEEEEEEeccch-----hhHHHHHHHHHHcCCCCccccceeeeeccCC
Q 011138 136 TISYMAERVVGTGSFGVVFQAKCLET-----GDSVAIKKVLQDK-----RYKNRELQIMRLLNHPNVVSLKHCFFSTTEK 205 (492)
Q Consensus 136 ~~~y~~~~~lG~G~fg~Vy~~~~~~~-----g~~vAiK~~~~~~-----~~~~~E~~il~~l~h~nIv~l~~~~~~~~~~ 205 (492)
..+|.+.+.||+|+||.||+|.+... +..||+|.+.... ....+|+.+++.++||||+++++++ .
T Consensus 5 ~~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~~~aik~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~-----~ 79 (277)
T cd05032 5 REKITLIRELGQGSFGMVYEGLAKGVVKGEPETRVAIKTVNENASMRERIEFLNEASVMKEFNCHHVVRLLGVV-----S 79 (277)
T ss_pred hHHeeEEeEecCCCCceEEEEEEeccCCCCcceeEEEEecCCccCHHHHHHHHHHHHHHHhCCCCceeEEEEEE-----c
Confidence 35799999999999999999988644 4789999875432 2345799999999999999999988 3
Q ss_pred CceEEEEEeeechh-hHHHHhhhhhh------cCCCcCHHHHHHHHHHHHHHHHHHHhhCCcccCCCCCCceEEcCCCCc
Q 011138 206 DELYLNLVLEYISE-TVYRVSKHYTR------MNQHVPILYVQLYTYQICRALNYLHHVVGVCHRDIKPQNLLVNPHTHQ 278 (492)
Q Consensus 206 ~~~~~~lV~E~~~~-~l~~~~~~~~~------~~~~~~~~~~~~i~~qi~~aL~yLH~~~givHrDlKp~NILl~~~~~~ 278 (492)
+..+.++||||+++ ++...+..... ....+++..+..++.||+.||.|||+ .||+||||||+|||++.++ .
T Consensus 80 ~~~~~~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~-~~i~H~di~p~nill~~~~-~ 157 (277)
T cd05032 80 TGQPTLVVMELMAKGDLKSYLRSRRPEAENNPGLGPPTLQKFIQMAAEIADGMAYLAA-KKFVHRDLAARNCMVAEDL-T 157 (277)
T ss_pred CCCCcEEEEecCCCCCHHHHHHhcccchhhccCCCCCCHHHHHHHHHHHHHHHHHHHh-CCccccccChheEEEcCCC-C
Confidence 44568899999975 55554433221 12246778889999999999999997 9999999999999999888 7
Q ss_pred EEEeeecCccccCCCC---CCccceeccCccCchhhcCCCCCCcchhhHHHHHHHHHHHh-CCCCCCCCChHHHHHHHHH
Q 011138 279 LKICDFGSAKMLVPGE---PNISYICSRYYRAPELIFGATEYTTAIDMWSIGCVLAELLL-GQPLFPGESGVDQLVEIIK 354 (492)
Q Consensus 279 vkL~DFG~a~~~~~~~---~~~~~~gt~~y~aPE~~~~~~~~~~~~DvwSlGvil~ell~-G~~pf~~~~~~~~~~~i~~ 354 (492)
+||+|||+++...... ......++..|+|||.+.+. .++.++|||||||++|||++ |..||.+.+..+....+..
T Consensus 158 ~kl~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~-~~~~~~Di~slG~il~el~t~g~~p~~~~~~~~~~~~~~~ 236 (277)
T cd05032 158 VKIGDFGMTRDIYETDYYRKGGKGLLPVRWMAPESLKDG-VFTTKSDVWSFGVVLWEMATLAEQPYQGLSNEEVLKFVID 236 (277)
T ss_pred EEECCcccchhhccCcccccCCCCCccccccCHHHHhcC-CCCcccchHHHHHHHHHhhccCCCCCccCCHHHHHHHHhc
Confidence 9999999987654322 12234567889999998654 48999999999999999998 9999987765544333321
Q ss_pred HhCCCCHHHHhhcCCCCcccCCCcccCCCcccccCCCCChhHhhhhccccccCCCCcCCHHHhhC
Q 011138 355 ILGTPTREEIKCMNPNYTEFKFPQIKAHPWHKIFHKRMPPEALDLVSRLLQYSPSLRCTALEACA 419 (492)
Q Consensus 355 ~~g~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~Li~~~L~~dP~~R~t~~e~l~ 419 (492)
+. ... ++...+.++.+||.+||+.||++|||+.++++
T Consensus 237 --~~--------------~~~------------~~~~~~~~~~~li~~~l~~~p~~Rpt~~~l~~ 273 (277)
T cd05032 237 --GG--------------HLD------------LPENCPDKLLELMRMCWQYNPKMRPTFLEIVS 273 (277)
T ss_pred --CC--------------CCC------------CCCCCCHHHHHHHHHHcCCChhhCCCHHHHHH
Confidence 00 001 12345889999999999999999999999975
No 304
>cd05105 PTKc_PDGFR_alpha Catalytic domain of the Protein Tyrosine Kinase, Platelet Derived Growth Factor Receptor alpha. Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) alpha; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR alpha is a receptor tyr kinase (RTK) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding to its ligands, the PDGFs, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. PDGFR alpha forms homodimers or heterodimers with PDGFR beta, depending on the nature of the PDGF ligand. PDGF-AA, PDGF-
Probab=100.00 E-value=1e-38 Score=326.74 Aligned_cols=249 Identities=26% Similarity=0.380 Sum_probs=190.3
Q ss_pred ccceeEeeeeccCCceEEEEEEEcCC-----CCEEEEEEeccc-----hhhHHHHHHHHHHcC-CCCccccceeeeeccC
Q 011138 136 TISYMAERVVGTGSFGVVFQAKCLET-----GDSVAIKKVLQD-----KRYKNRELQIMRLLN-HPNVVSLKHCFFSTTE 204 (492)
Q Consensus 136 ~~~y~~~~~lG~G~fg~Vy~~~~~~~-----g~~vAiK~~~~~-----~~~~~~E~~il~~l~-h~nIv~l~~~~~~~~~ 204 (492)
..+|++++.||+|+||.||+|.+... +..||||++... .....+|+.+++.+. |||||++++++
T Consensus 36 ~~~~~~~~~LG~G~fG~Vy~~~~~~~~~~~~~~~vavK~l~~~~~~~~~~~~~~Ei~~l~~l~~HpnIv~l~~~~----- 110 (400)
T cd05105 36 RDGLVLGRILGSGAFGKVVEGTAYGLSRSQPVMKVAVKMLKPTARSSEKQALMSELKIMTHLGPHLNIVNLLGAC----- 110 (400)
T ss_pred ccceehhheecCCCCceEEEEEEcccCCCCCceEEEEEecCCCCChHHHHHHHHHHHHHHhcCCCCCeeeEEEEE-----
Confidence 45799999999999999999987433 357999988542 233457999999996 99999999998
Q ss_pred CCceEEEEEeeechhh-HHHHhhhhh------------------------------------------------------
Q 011138 205 KDELYLNLVLEYISET-VYRVSKHYT------------------------------------------------------ 229 (492)
Q Consensus 205 ~~~~~~~lV~E~~~~~-l~~~~~~~~------------------------------------------------------ 229 (492)
.+...+|||||||.++ |.+.+....
T Consensus 111 ~~~~~~~lv~Ey~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 190 (400)
T cd05105 111 TKSGPIYIITEYCFYGDLVNYLHKNRDNFLSRHPEKPKKDLDIFGINPADESTRSYVILSFENKGDYMDMKQADTTQYVP 190 (400)
T ss_pred ccCCceEEEEEecCCCcHHHHHHHhhhhhhccccccccccccccCCCcccccccchhhhhhcccccccccccccccccch
Confidence 4445689999999854 444332210
Q ss_pred --------------------------------------hcCCCcCHHHHHHHHHHHHHHHHHHHhhCCcccCCCCCCceE
Q 011138 230 --------------------------------------RMNQHVPILYVQLYTYQICRALNYLHHVVGVCHRDIKPQNLL 271 (492)
Q Consensus 230 --------------------------------------~~~~~~~~~~~~~i~~qi~~aL~yLH~~~givHrDlKp~NIL 271 (492)
.....+++..+..++.||+.||.|||+ .||+||||||+|||
T Consensus 191 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~LH~-~~ivH~dikp~Nil 269 (400)
T cd05105 191 MLEIKEASKYSDIQRSNYDRPASYKGSNDSEVKNLLSDDGSEGLTTLDLLSFTYQVARGMEFLAS-KNCVHRDLAARNVL 269 (400)
T ss_pred hhhhhhhhhhhhcccCcccccccccCcchhhHHHHHHhcccCCCCHHHHHHHHHHHHHHHHHHHh-CCeeCCCCChHhEE
Confidence 011347778888999999999999997 99999999999999
Q ss_pred EcCCCCcEEEeeecCccccCCCCC---CccceeccCccCchhhcCCCCCCcchhhHHHHHHHHHHHh-CCCCCCCCChHH
Q 011138 272 VNPHTHQLKICDFGSAKMLVPGEP---NISYICSRYYRAPELIFGATEYTTAIDMWSIGCVLAELLL-GQPLFPGESGVD 347 (492)
Q Consensus 272 l~~~~~~vkL~DFG~a~~~~~~~~---~~~~~gt~~y~aPE~~~~~~~~~~~~DvwSlGvil~ell~-G~~pf~~~~~~~ 347 (492)
++.++ .+||+|||+++....... .....+++.|+|||++.+. .++.++|||||||++|+|++ |..||.......
T Consensus 270 l~~~~-~~kL~DfGla~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~-~~~~~~DiwSlGvil~ellt~g~~P~~~~~~~~ 347 (400)
T cd05105 270 LAQGK-IVKICDFGLARDIMHDSNYVSKGSTFLPVKWMAPESIFDN-LYTTLSDVWSYGILLWEIFSLGGTPYPGMIVDS 347 (400)
T ss_pred EeCCC-EEEEEeCCcceeccccccccccCCcCCCcceEChhhhcCC-CCCchhhHHHHHHHHHHHHHCCCCCCcccchhH
Confidence 99877 799999999976533221 2234567889999998654 48999999999999999997 999998765443
Q ss_pred HHHHHHHHhCCCCHHHHhhcCCCCcccCCCcccCCCcccccCCCCChhHhhhhccccccCCCCcCCHHHhhC
Q 011138 348 QLVEIIKILGTPTREEIKCMNPNYTEFKFPQIKAHPWHKIFHKRMPPEALDLVSRLLQYSPSLRCTALEACA 419 (492)
Q Consensus 348 ~~~~i~~~~g~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~Li~~~L~~dP~~R~t~~e~l~ 419 (492)
.+...+.. ....+ .+..++.++.+||.+||+.||++||++.++.+
T Consensus 348 ~~~~~~~~-----------------~~~~~----------~~~~~~~~l~~li~~cl~~dP~~RPt~~~l~~ 392 (400)
T cd05105 348 TFYNKIKS-----------------GYRMA----------KPDHATQEVYDIMVKCWNSEPEKRPSFLHLSD 392 (400)
T ss_pred HHHHHHhc-----------------CCCCC----------CCccCCHHHHHHHHHHCccCHhHCcCHHHHHH
Confidence 33332221 00000 12346889999999999999999999998765
No 305
>cd05036 PTKc_ALK_LTK Catalytic domain of the Protein Tyrosine Kinases, Anaplastic Lymphoma Kinase and Leukocyte Tyrosine Kinase. Protein Tyrosine Kinase (PTK) family; Anaplastic Lymphoma Kinase (ALK) and Leukocyte Tyrosine (tyr) Kinase (LTK); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyr residues in protein substrates. ALK and LTK are orphan receptor tyr kinases (RTKs) whose ligands are not yet well-defined. RTKs contain an extracellular ligand-binding domain, a transmembrane region, and an intracellular tyr kinase domain. They are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain. ALK appears to play an important role in mammalian neural development as well
Probab=100.00 E-value=1.2e-38 Score=311.00 Aligned_cols=250 Identities=22% Similarity=0.292 Sum_probs=192.6
Q ss_pred ccceeEeeeeccCCceEEEEEEEcC-----CCCEEEEEEeccch-----hhHHHHHHHHHHcCCCCccccceeeeeccCC
Q 011138 136 TISYMAERVVGTGSFGVVFQAKCLE-----TGDSVAIKKVLQDK-----RYKNRELQIMRLLNHPNVVSLKHCFFSTTEK 205 (492)
Q Consensus 136 ~~~y~~~~~lG~G~fg~Vy~~~~~~-----~g~~vAiK~~~~~~-----~~~~~E~~il~~l~h~nIv~l~~~~~~~~~~ 205 (492)
..+|.+.+.||+|+||.||+|.+.. ++..||+|.+.... ....+|+.+++.++|+||+++++++.
T Consensus 5 ~~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~~~v~ik~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~----- 79 (277)
T cd05036 5 RDSITLLRALGHGAFGEVYEGLYRGRDGDAVELQVAVKTLPESCSEQDESDFLMEALIMSKFNHQNIVRLIGVSF----- 79 (277)
T ss_pred HHHcEeeeECCCCCCCcEEEEEEecCCCCCCceeEEEEEcCCCCCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEc-----
Confidence 3469999999999999999999977 77889999875322 23457999999999999999999874
Q ss_pred CceEEEEEeeechh-hHHHHhhhhhh---cCCCcCHHHHHHHHHHHHHHHHHHHhhCCcccCCCCCCceEEcCCC--CcE
Q 011138 206 DELYLNLVLEYISE-TVYRVSKHYTR---MNQHVPILYVQLYTYQICRALNYLHHVVGVCHRDIKPQNLLVNPHT--HQL 279 (492)
Q Consensus 206 ~~~~~~lV~E~~~~-~l~~~~~~~~~---~~~~~~~~~~~~i~~qi~~aL~yLH~~~givHrDlKp~NILl~~~~--~~v 279 (492)
+....++||||+.+ .+..++..... ....+++..+..++.||+.||.|||+ +|++||||||+|||++.++ ..+
T Consensus 80 ~~~~~~lv~e~~~g~~L~~~i~~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~LH~-~~ivH~dlkp~nil~~~~~~~~~~ 158 (277)
T cd05036 80 ERLPRFILLELMAGGDLKSFLRENRPRPERPSSLTMKDLLFCARDVAKGCKYLEE-NHFIHRDIAARNCLLTCKGPGRVA 158 (277)
T ss_pred cCCCcEEEEecCCCCCHHHHHHHhCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHH-CCEeecccchheEEEeccCCCcce
Confidence 33347899999975 45544433221 12357888999999999999999997 9999999999999998653 259
Q ss_pred EEeeecCccccCCCCC---CccceeccCccCchhhcCCCCCCcchhhHHHHHHHHHHHh-CCCCCCCCChHHHHHHHHHH
Q 011138 280 KICDFGSAKMLVPGEP---NISYICSRYYRAPELIFGATEYTTAIDMWSIGCVLAELLL-GQPLFPGESGVDQLVEIIKI 355 (492)
Q Consensus 280 kL~DFG~a~~~~~~~~---~~~~~gt~~y~aPE~~~~~~~~~~~~DvwSlGvil~ell~-G~~pf~~~~~~~~~~~i~~~ 355 (492)
||+|||+++....... ......+..|+|||++.+.. ++.++|||||||++|+|++ |..||.+.+..+....+...
T Consensus 159 kl~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~-~~~~~DiwslG~il~el~~~g~~pf~~~~~~~~~~~~~~~ 237 (277)
T cd05036 159 KIADFGMARDIYRASYYRKGGRAMLPIKWMPPEAFLDGI-FTSKTDVWSFGVLLWEIFSLGYMPYPGRTNQEVMEFVTGG 237 (277)
T ss_pred EeccCccccccCCccceecCCCCCccHhhCCHHHHhcCC-cCchhHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHHcC
Confidence 9999999986532211 11223356799999996544 8999999999999999996 99999887665443332210
Q ss_pred hCCCCHHHHhhcCCCCcccCCCcccCCCcccccCCCCChhHhhhhccccccCCCCcCCHHHhhCC
Q 011138 356 LGTPTREEIKCMNPNYTEFKFPQIKAHPWHKIFHKRMPPEALDLVSRLLQYSPSLRCTALEACAH 420 (492)
Q Consensus 356 ~g~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~Li~~~L~~dP~~R~t~~e~l~H 420 (492)
+ ... ++..++..+.+|+.+||+.||++||++.++++|
T Consensus 238 -~---------------~~~------------~~~~~~~~~~~~i~~cl~~~p~~Rps~~~vl~~ 274 (277)
T cd05036 238 -G---------------RLD------------PPKGCPGPVYRIMTDCWQHTPEDRPNFATILER 274 (277)
T ss_pred -C---------------cCC------------CCCCCCHHHHHHHHHHcCCCcccCcCHHHHHHH
Confidence 0 000 123568899999999999999999999999976
No 306
>cd05123 STKc_AGC Catalytic domain of AGC family Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), AGC (Protein Kinases A, G and C) family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The AGC family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and Phosphoinositide 3-Kinase (PI3K). Members of this family include cAMP-dependent Protein Kinase (PKA), cGMP-dependent Protein Kinase (PKG), Protein Kinase C (PKC), Protein Kinase B (PKB), G protein-coupled Receptor Kinase (GRK), Serum- and Glucocorticoid-induced Kinase (SGK), and 70 kDa ribosomal Protein S6 Kinase (p70S6K or S6K), among others. AGC kinases share an activation mechanism based on the phosphorylation of up to three sites: the activation loop (A-loop), the hydrophobic motif (HM) and the
Probab=100.00 E-value=2.3e-38 Score=303.54 Aligned_cols=238 Identities=36% Similarity=0.589 Sum_probs=194.4
Q ss_pred eccCCceEEEEEEEcCCCCEEEEEEeccch-------hhHHHHHHHHHHcCCCCccccceeeeeccCCCceEEEEEeeec
Q 011138 145 VGTGSFGVVFQAKCLETGDSVAIKKVLQDK-------RYKNRELQIMRLLNHPNVVSLKHCFFSTTEKDELYLNLVLEYI 217 (492)
Q Consensus 145 lG~G~fg~Vy~~~~~~~g~~vAiK~~~~~~-------~~~~~E~~il~~l~h~nIv~l~~~~~~~~~~~~~~~~lV~E~~ 217 (492)
||.|+||.||++.+..+++.||+|.+.... ....+|+.+++.++|+||+++++.+ .+..+.|+||||+
T Consensus 1 lg~G~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~-----~~~~~~~~v~e~~ 75 (250)
T cd05123 1 LGKGSFGKVLLVRKKDTGKLYAMKVLKKKKIIKRKEVEHTLTERNILSRINHPFIVKLHYAF-----QTEEKLYLVLEYA 75 (250)
T ss_pred CCCCCceEEEEEEECCCCcEEEEEEeehhhhcchHHHHHHHHHHHHHHHcCCCcHHHHHHHe-----ecCCeeEEEEecC
Confidence 699999999999999899999999885432 2456799999999999999999988 5556789999999
Q ss_pred h-hhHHHHhhhhhhcCCCcCHHHHHHHHHHHHHHHHHHHhhCCcccCCCCCCceEEcCCCCcEEEeeecCccccCCC-CC
Q 011138 218 S-ETVYRVSKHYTRMNQHVPILYVQLYTYQICRALNYLHHVVGVCHRDIKPQNLLVNPHTHQLKICDFGSAKMLVPG-EP 295 (492)
Q Consensus 218 ~-~~l~~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~yLH~~~givHrDlKp~NILl~~~~~~vkL~DFG~a~~~~~~-~~ 295 (492)
. +.+.+.+.. ...+++..+..++.||+.||.|||+ .|++|+||||+||+++.++ .++|+|||++...... ..
T Consensus 76 ~~~~L~~~l~~----~~~l~~~~~~~~~~qi~~~l~~lh~-~~~~H~~l~p~ni~~~~~~-~~~l~d~~~~~~~~~~~~~ 149 (250)
T cd05123 76 PGGELFSHLSK----EGRFSEERARFYAAEIVLALEYLHS-LGIIYRDLKPENILLDADG-HIKLTDFGLAKELSSEGSR 149 (250)
T ss_pred CCCcHHHHHHh----cCCCCHHHHHHHHHHHHHHHHHHHH-CCceecCCCcceEEEcCCC-cEEEeecCcceecccCCCc
Confidence 5 455444332 3368889999999999999999997 9999999999999999887 7999999998765433 22
Q ss_pred CccceeccCccCchhhcCCCCCCcchhhHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCCHHHHhhcCCCCcccC
Q 011138 296 NISYICSRYYRAPELIFGATEYTTAIDMWSIGCVLAELLLGQPLFPGESGVDQLVEIIKILGTPTREEIKCMNPNYTEFK 375 (492)
Q Consensus 296 ~~~~~gt~~y~aPE~~~~~~~~~~~~DvwSlGvil~ell~G~~pf~~~~~~~~~~~i~~~~g~p~~~~~~~~~~~~~~~~ 375 (492)
.....++..|+|||.+.+.. ++.++|+|||||++|+|++|..||...+.......+.. ....
T Consensus 150 ~~~~~~~~~~~~Pe~~~~~~-~~~~~D~~slG~~~~~l~~g~~p~~~~~~~~~~~~~~~-----------------~~~~ 211 (250)
T cd05123 150 TNTFCGTPEYLAPEVLLGKG-YGKAVDWWSLGVLLYEMLTGKPPFYAEDRKEIYEKILK-----------------DPLR 211 (250)
T ss_pred ccCCcCCccccChHHhCCCC-CCchhhHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHhc-----------------CCCC
Confidence 34567788999999986544 78899999999999999999999987765333333322 0111
Q ss_pred CCcccCCCcccccCCCCChhHhhhhccccccCCCCcCCH---HHhhCCCCC
Q 011138 376 FPQIKAHPWHKIFHKRMPPEALDLVSRLLQYSPSLRCTA---LEACAHPFF 423 (492)
Q Consensus 376 ~~~~~~~~~~~~~~~~~s~~~~~Li~~~L~~dP~~R~t~---~e~l~Hp~f 423 (492)
++..++.++.++|++||..||++||++ .++++||||
T Consensus 212 ------------~~~~~~~~l~~~i~~~l~~~p~~R~~~~~~~~l~~~~~f 250 (250)
T cd05123 212 ------------FPEFLSPEARDLISGLLQKDPTKRLGSGGAEEIKAHPFF 250 (250)
T ss_pred ------------CCCCCCHHHHHHHHHHhcCCHhhCCCcccHHHHHhCCCC
Confidence 223468899999999999999999999 999999998
No 307
>KOG1035 consensus eIF-2alpha kinase GCN2 [Translation, ribosomal structure and biogenesis]
Probab=100.00 E-value=1.8e-39 Score=345.91 Aligned_cols=257 Identities=31% Similarity=0.441 Sum_probs=194.5
Q ss_pred cceeEeeeeccCCceEEEEEEEcCCCCEEEEEEeccch-----hhHHHHHHHHHHcCCCCccccceeeeeccCC------
Q 011138 137 ISYMAERVVGTGSFGVVFQAKCLETGDSVAIKKVLQDK-----RYKNRELQIMRLLNHPNVVSLKHCFFSTTEK------ 205 (492)
Q Consensus 137 ~~y~~~~~lG~G~fg~Vy~~~~~~~g~~vAiK~~~~~~-----~~~~~E~~il~~l~h~nIv~l~~~~~~~~~~------ 205 (492)
.+|+..++||+||||.||+++++-+|+.||||+|.-.. ....+|+.+|.+|+|||||++|..+......
T Consensus 479 ~DFEEL~lLGkGGFG~VvkVRNKlDGr~YAIKKIpl~~s~~~~skI~rEVk~LArLnHpNVVRYysAWVEs~~~~~~~ei 558 (1351)
T KOG1035|consen 479 NDFEELELLGKGGFGSVVKVRNKLDGREYAIKKIPLKASDKLYSKILREVKLLARLNHPNVVRYYSAWVESTAELTVLEI 558 (1351)
T ss_pred hhhHHHHHhcCCCCceEEEEeecccchhhhhhhccCchHHHHHHHHHHHHHHHhhcCCcceeeeehhhhccCCccccccc
Confidence 46788899999999999999999999999999985432 2234799999999999999997543211000
Q ss_pred -------------------------------------------------------------------C------------
Q 011138 206 -------------------------------------------------------------------D------------ 206 (492)
Q Consensus 206 -------------------------------------------------------------------~------------ 206 (492)
+
T Consensus 559 ~~~~~~~~sQs~s~~~~~~~~~q~t~~p~~~~~~~~~~~~dd~sss~~~~~~~~~~~~d~e~~d~dedg~~~S~tS~~e~ 638 (1351)
T KOG1035|consen 559 VASDSESRSQSASKYNGVDIRYQPTSSPSLTLSELDSEDEDDKSSSYTTRKASYESSTDEENDDSDEDGRNLSNTSDSEG 638 (1351)
T ss_pred cccchhhhcccCCCcccceeeeccCCCcccCcchhhccccCccccccccccccccccCCcccccccccccccccccccCC
Confidence 0
Q ss_pred ---------------------c--------eEEEEEeeechhhHHHHhhhhhhcCCCcCHHHHHHHHHHHHHHHHHHHhh
Q 011138 207 ---------------------E--------LYLNLVLEYISETVYRVSKHYTRMNQHVPILYVQLYTYQICRALNYLHHV 257 (492)
Q Consensus 207 ---------------------~--------~~~~lV~E~~~~~l~~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~yLH~~ 257 (492)
. .++||-||||+..+++.+........ ....++.+++||+.||.|+|+
T Consensus 639 ~~~~d~~~ess~s~~~~~n~~e~~~~~q~~~~LYIQMEyCE~~ll~~iI~~N~~~~--~~d~~wrLFreIlEGLaYIH~- 715 (1351)
T KOG1035|consen 639 SVILDDTSESSESIPKTENSSEPMVPVQKPLILYIQMEYCEKTLLRDIIRRNHFNS--QRDEAWRLFREILEGLAYIHD- 715 (1351)
T ss_pred ccccCcchhhhhhccccCCccccccccccceEEEEEHhhhhhhHHHHHHHhcccch--hhHHHHHHHHHHHHHHHHHHh-
Confidence 1 57899999999887776544322111 466789999999999999998
Q ss_pred CCcccCCCCCCceEEcCCCCcEEEeeecCccccC-------------------CCCCCccceeccCccCchhhcCCC--C
Q 011138 258 VGVCHRDIKPQNLLVNPHTHQLKICDFGSAKMLV-------------------PGEPNISYICSRYYRAPELIFGAT--E 316 (492)
Q Consensus 258 ~givHrDlKp~NILl~~~~~~vkL~DFG~a~~~~-------------------~~~~~~~~~gt~~y~aPE~~~~~~--~ 316 (492)
+|||||||||.||++++++ .|||+|||+|+... +....++.+||.-|+|||++.+.. .
T Consensus 716 ~giIHRDLKP~NIFLd~~~-~VKIGDFGLAt~~~~~~~~~d~~~~~~~~~~g~~~~~~Ts~VGTalYvAPEll~~~~~~~ 794 (1351)
T KOG1035|consen 716 QGIIHRDLKPRNIFLDSRN-SVKIGDFGLATDLKENLESIDQDLSFSTNRAGSNDGDLTSQVGTALYVAPELLSDTSSNK 794 (1351)
T ss_pred CceeeccCCcceeEEcCCC-CeeecccccchhhhhhhhhHhhccCccccccCCCCcccccccceeeeecHHHhccccccc
Confidence 8999999999999999887 79999999997621 111345679999999999997666 6
Q ss_pred CCcchhhHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCCHHHHhhcCCCCcccCCCcccCCCcccccCCCCChhH
Q 011138 317 YTTAIDMWSIGCVLAELLLGQPLFPGESGVDQLVEIIKILGTPTREEIKCMNPNYTEFKFPQIKAHPWHKIFHKRMPPEA 396 (492)
Q Consensus 317 ~~~~~DvwSlGvil~ell~G~~pf~~~~~~~~~~~i~~~~g~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~ 396 (492)
|+.|+|+|||||||+||+. ||...-. .. .++..+.. ..+|.. ..|+..--+.-
T Consensus 795 Yn~KiDmYSLGIVlFEM~y---PF~TsME--Ra-~iL~~LR~---------------g~iP~~------~~f~~~~~~~e 847 (1351)
T KOG1035|consen 795 YNSKIDMYSLGIVLFEMLY---PFGTSME--RA-SILTNLRK---------------GSIPEP------ADFFDPEHPEE 847 (1351)
T ss_pred ccchhhhHHHHHHHHHHhc---cCCchHH--HH-HHHHhccc---------------CCCCCC------cccccccchHH
Confidence 9999999999999999986 5654322 22 22222211 112211 11122223456
Q ss_pred hhhhccccccCCCCcCCHHHhhCCCCCC
Q 011138 397 LDLVSRLLQYSPSLRCTALEACAHPFFD 424 (492)
Q Consensus 397 ~~Li~~~L~~dP~~R~t~~e~l~Hp~f~ 424 (492)
..+|++||+.||.+||||.|+|++.||-
T Consensus 848 ~slI~~Ll~hdP~kRPtA~eLL~s~llp 875 (1351)
T KOG1035|consen 848 ASLIRWLLSHDPSKRPTATELLNSELLP 875 (1351)
T ss_pred HHHHHHHhcCCCccCCCHHHHhhccCCC
Confidence 7999999999999999999999999998
No 308
>cd06614 STKc_PAK Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase. Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs are implicated in the regulation of many cellular processes including growth factor receptor-mediated proliferation, cell polarity, cell motility, cell death and survival, and actin cytoskeleton organization. PAK deregulation is associated with tumor development. PAKs from higher eukaryotes are classified into two grou
Probab=100.00 E-value=1.6e-38 Score=311.52 Aligned_cols=254 Identities=29% Similarity=0.447 Sum_probs=203.9
Q ss_pred cceeEeeeeccCCceEEEEEEEcCCCCEEEEEEeccch---hhHHHHHHHHHHcCCCCccccceeeeeccCCCceEEEEE
Q 011138 137 ISYMAERVVGTGSFGVVFQAKCLETGDSVAIKKVLQDK---RYKNRELQIMRLLNHPNVVSLKHCFFSTTEKDELYLNLV 213 (492)
Q Consensus 137 ~~y~~~~~lG~G~fg~Vy~~~~~~~g~~vAiK~~~~~~---~~~~~E~~il~~l~h~nIv~l~~~~~~~~~~~~~~~~lV 213 (492)
..|.+...||+|+||.||+|.+..++..|++|.+.... ....+|+++++.++|+||+++++++.. ....|+|
T Consensus 19 ~~~~~~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~-----~~~~~lv 93 (286)
T cd06614 19 ELYKNLEKIGEGASGEVYKATDRATGKEVAIKKMRLRKQNKELIINEILIMKDCKHPNIVDYYDSYLV-----GDELWVV 93 (286)
T ss_pred ccchHhHhccCCCCeEEEEEEEccCCcEEEEEEEecCchhHHHHHHHHHHHHHCCCCCeeEEEEEEEE-----CCEEEEE
Confidence 45888899999999999999999899999999886543 345679999999999999999998843 3468999
Q ss_pred eeechh-hHHHHhhhhhhcCCCcCHHHHHHHHHHHHHHHHHHHhhCCcccCCCCCCceEEcCCCCcEEEeeecCccccCC
Q 011138 214 LEYISE-TVYRVSKHYTRMNQHVPILYVQLYTYQICRALNYLHHVVGVCHRDIKPQNLLVNPHTHQLKICDFGSAKMLVP 292 (492)
Q Consensus 214 ~E~~~~-~l~~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~yLH~~~givHrDlKp~NILl~~~~~~vkL~DFG~a~~~~~ 292 (492)
+||+++ .+.+.+... ...++...+..++.||+.||.|||+ .||+|+||||+||+++.++ .++|+|||++.....
T Consensus 94 ~e~~~~~~L~~~l~~~---~~~l~~~~~~~i~~~i~~~L~~lH~-~gi~H~dl~p~ni~i~~~~-~~~l~d~~~~~~~~~ 168 (286)
T cd06614 94 MEYMDGGSLTDIITQN---FVRMNEPQIAYVCREVLQGLEYLHS-QNVIHRDIKSDNILLSKDG-SVKLADFGFAAQLTK 168 (286)
T ss_pred EeccCCCcHHHHHHHh---ccCCCHHHHHHHHHHHHHHHHHHHh-CCeeeCCCChhhEEEcCCC-CEEECccchhhhhcc
Confidence 999995 454443321 1378889999999999999999997 9999999999999999887 799999998865532
Q ss_pred CC-CCccceeccCccCchhhcCCCCCCcchhhHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCCHHHHhhcCCCC
Q 011138 293 GE-PNISYICSRYYRAPELIFGATEYTTAIDMWSIGCVLAELLLGQPLFPGESGVDQLVEIIKILGTPTREEIKCMNPNY 371 (492)
Q Consensus 293 ~~-~~~~~~gt~~y~aPE~~~~~~~~~~~~DvwSlGvil~ell~G~~pf~~~~~~~~~~~i~~~~g~p~~~~~~~~~~~~ 371 (492)
.. ......++..|+|||.+.+. .++.++|+|||||++|+|++|..||...+.......+... +.+.
T Consensus 169 ~~~~~~~~~~~~~y~~PE~~~~~-~~~~~~Dv~slGvil~~l~~g~~p~~~~~~~~~~~~~~~~-~~~~----------- 235 (286)
T cd06614 169 EKSKRNSVVGTPYWMAPEVIKRK-DYGPKVDIWSLGIMCIEMAEGEPPYLREPPLRALFLITTK-GIPP----------- 235 (286)
T ss_pred chhhhccccCCcccCCHhHhcCC-CCCCccccHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhc-CCCC-----------
Confidence 22 12334578899999998654 4899999999999999999999999877665444443221 0000
Q ss_pred cccCCCcccCCCcccccCCCCChhHhhhhccccccCCCCcCCHHHhhCCCCCCCCC
Q 011138 372 TEFKFPQIKAHPWHKIFHKRMPPEALDLVSRLLQYSPSLRCTALEACAHPFFDDLR 427 (492)
Q Consensus 372 ~~~~~~~~~~~~~~~~~~~~~s~~~~~Li~~~L~~dP~~R~t~~e~l~Hp~f~~~~ 427 (492)
++ ....++.++++||.+||+.||.+||++.+++.||||+...
T Consensus 236 ----~~----------~~~~~~~~l~~li~~~l~~~p~~Rpt~~~il~~~~~~~~~ 277 (286)
T cd06614 236 ----LK----------NPEKWSPEFKDFLNKCLVKDPEKRPSAEELLQHPFLKKAC 277 (286)
T ss_pred ----Cc----------chhhCCHHHHHHHHHHhccChhhCcCHHHHhhChHhhccC
Confidence 00 1123678999999999999999999999999999999854
No 309
>KOG4250 consensus TANK binding protein kinase TBK1 [Signal transduction mechanisms]
Probab=100.00 E-value=7.4e-40 Score=333.36 Aligned_cols=207 Identities=29% Similarity=0.397 Sum_probs=170.9
Q ss_pred eeEeeeeccCCceEEEEEEEcCCCCEEEEEEeccc-----hhhHHHHHHHHHHcCCCCccccceeeeeccC-CCceEEEE
Q 011138 139 YMAERVVGTGSFGVVFQAKCLETGDSVAIKKVLQD-----KRYKNRELQIMRLLNHPNVVSLKHCFFSTTE-KDELYLNL 212 (492)
Q Consensus 139 y~~~~~lG~G~fg~Vy~~~~~~~g~~vAiK~~~~~-----~~~~~~E~~il~~l~h~nIv~l~~~~~~~~~-~~~~~~~l 212 (492)
|...+.||+|+||.||+++++.+|+.||||.+... ....-+|+++|++|+|+|||++.+.=.+... --...-.+
T Consensus 15 W~~~e~LG~Ga~g~V~rgrnketG~~vAvK~~~~~~~~r~~e~~~~EieilkKLnh~NIVk~f~iee~~~~~~~~~~~vl 94 (732)
T KOG4250|consen 15 WEMDERLGKGAFGNVYRGRNKETGRLVAVKTFNKESSLRPRERWCREIEILKKLNHPNIVKLFDIEETKFLGLVTRLPVL 94 (732)
T ss_pred eeehhhhcCCccceeeeecccccccchhHHhhhhhcccchHHHHHHHHHHHHHcCchhhhhhcccCCccccCcccccceE
Confidence 67778999999999999999999999999988542 2334479999999999999999775311110 00112358
Q ss_pred EeeechhhHHHHhhhhhhcCCCcCHHHHHHHHHHHHHHHHHHHhhCCcccCCCCCCceEEcC--CC-CcEEEeeecCccc
Q 011138 213 VLEYISETVYRVSKHYTRMNQHVPILYVQLYTYQICRALNYLHHVVGVCHRDIKPQNLLVNP--HT-HQLKICDFGSAKM 289 (492)
Q Consensus 213 V~E~~~~~l~~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~yLH~~~givHrDlKp~NILl~~--~~-~~vkL~DFG~a~~ 289 (492)
|||||.|+.+.-....-.....+++.++..++..++.||.|||+ +|||||||||+||++-. ++ ..-||+|||.|+.
T Consensus 95 vmEyC~gGsL~~~L~~PEN~~GLpE~e~l~lL~d~~~al~~LrE-n~IvHRDlKP~NIvl~~Gedgq~IyKLtDfG~Are 173 (732)
T KOG4250|consen 95 VMEYCSGGSLRKVLNSPENAYGLPESEFLDLLSDLVSALRHLRE-NGIVHRDLKPGNIVLQIGEDGQSIYKLTDFGAARE 173 (732)
T ss_pred EEeecCCCcHHHHhcCcccccCCCHHHHHHHHHHHHHHHHHHHH-cCceeccCCCCcEEEeecCCCceEEeeeccccccc
Confidence 99999976555444445566789999999999999999999997 99999999999999832 22 2579999999999
Q ss_pred cCCCCCCccceeccCccCchhhcCCCCCCcchhhHHHHHHHHHHHhCCCCCCCCChH
Q 011138 290 LVPGEPNISYICSRYYRAPELIFGATEYTTAIDMWSIGCVLAELLLGQPLFPGESGV 346 (492)
Q Consensus 290 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DvwSlGvil~ell~G~~pf~~~~~~ 346 (492)
+..+....+.+||+.|.+||++.....|+..+|.|||||++|++.||..||......
T Consensus 174 l~d~s~~~S~vGT~~YLhPel~E~q~~y~~tVDLWS~GvtlY~caTG~lPF~p~~~p 230 (732)
T KOG4250|consen 174 LDDNSLFTSLVGTEEYLHPELYERQKKYTATVDLWSFGVTLYECATGELPFIPFGGP 230 (732)
T ss_pred CCCCCeeeeecCchhhcChHHHhhccCcCceeehhhhhhHHHHHhccCCCCCcCCCc
Confidence 999998999999999999999976678999999999999999999999999664443
No 310
>cd08224 STKc_Nek6_Nek7 Catalytic domain of the Protein Serine/Threonine Kinases, Never In Mitosis gene A-related kinase 6 and 7. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 6 (Nek6) and Nek7 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek6/7 subfamily is part of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek6 and Nek7 are the shortest Neks, consisting only of the catalytic domain and a very short N-terminal extension. They show distinct expression patterns and both appear to be downstream substrates of Nek9. They are required for mitotic spindle formation and cytokinesis. They may a
Probab=100.00 E-value=3.9e-38 Score=304.90 Aligned_cols=250 Identities=30% Similarity=0.516 Sum_probs=195.3
Q ss_pred cceeEeeeeccCCceEEEEEEEcCCCCEEEEEEecc-------chhhHHHHHHHHHHcCCCCccccceeeeeccCCCceE
Q 011138 137 ISYMAERVVGTGSFGVVFQAKCLETGDSVAIKKVLQ-------DKRYKNRELQIMRLLNHPNVVSLKHCFFSTTEKDELY 209 (492)
Q Consensus 137 ~~y~~~~~lG~G~fg~Vy~~~~~~~g~~vAiK~~~~-------~~~~~~~E~~il~~l~h~nIv~l~~~~~~~~~~~~~~ 209 (492)
++|.+.+.||+|+||.||+|.+..+|+.||+|.+.. ......+|+++++.++|+||+++++++. +...
T Consensus 2 ~~y~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~ei~~l~~~~~~~i~~~~~~~~-----~~~~ 76 (267)
T cd08224 2 GNFKIEKKIGKGQFSVVYKAICLLDGRVVALKKVQIFEMMDAKARQDCLKEIDLLKQLDHPNVIKYLASFI-----ENNE 76 (267)
T ss_pred CceeeeeeeccCCceEEEEEEEcCCCCEEEEEEeecccccchhhHHHHHHHHHHHHhCCCCCeeeeeeeee-----cCCe
Confidence 469999999999999999999999999999998742 1234557999999999999999999984 3446
Q ss_pred EEEEeeechh-hHHHHhhhhhhcCCCcCHHHHHHHHHHHHHHHHHHHhhCCcccCCCCCCceEEcCCCCcEEEeeecCcc
Q 011138 210 LNLVLEYISE-TVYRVSKHYTRMNQHVPILYVQLYTYQICRALNYLHHVVGVCHRDIKPQNLLVNPHTHQLKICDFGSAK 288 (492)
Q Consensus 210 ~~lV~E~~~~-~l~~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~yLH~~~givHrDlKp~NILl~~~~~~vkL~DFG~a~ 288 (492)
.++||||+++ .+...+.........++...+..++.||+.||.|||+ .||+||||||+||+++.++ .++|+|||++.
T Consensus 77 ~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~-~~i~h~dl~p~nil~~~~~-~~~l~d~~~~~ 154 (267)
T cd08224 77 LNIVLELADAGDLSRMIKHFKKQKRLIPERTIWKYFVQLCSALEHMHS-KRIMHRDIKPANVFITATG-VVKLGDLGLGR 154 (267)
T ss_pred EEEEEecCCCCCHHHHHHHhcccCCCcCHHHHHHHHHHHHHHHHHHHh-CCEecCCcChhhEEECCCC-cEEEeccceee
Confidence 8899999986 5555544433445568899999999999999999997 9999999999999999887 79999999987
Q ss_pred ccCCCC-CCccceeccCccCchhhcCCCCCCcchhhHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCCHHHHhhc
Q 011138 289 MLVPGE-PNISYICSRYYRAPELIFGATEYTTAIDMWSIGCVLAELLLGQPLFPGESGVDQLVEIIKILGTPTREEIKCM 367 (492)
Q Consensus 289 ~~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~~~~DvwSlGvil~ell~G~~pf~~~~~~~~~~~i~~~~g~p~~~~~~~~ 367 (492)
...... ......+++.|+|||.+.+. .++.++|+|||||++|+|++|..||...... .......+
T Consensus 155 ~~~~~~~~~~~~~~~~~y~apE~~~~~-~~~~~~Di~slG~il~~l~~g~~p~~~~~~~--~~~~~~~~----------- 220 (267)
T cd08224 155 FFSSKTTAAHSLVGTPYYMSPERIHEN-GYNFKSDIWSLGCLLYEMAALQSPFYGDKMN--LYSLCKKI----------- 220 (267)
T ss_pred eccCCCcccceecCCccccCHHHhccC-CCCchhcHHHHHHHHHHHHHCCCCcccCCcc--HHHHHhhh-----------
Confidence 653322 22345788999999998654 4889999999999999999999999654311 11111110
Q ss_pred CCCCcccCCCcccCCCcccccCCCCChhHhhhhccccccCCCCcCCHHHhhC
Q 011138 368 NPNYTEFKFPQIKAHPWHKIFHKRMPPEALDLVSRLLQYSPSLRCTALEACA 419 (492)
Q Consensus 368 ~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~Li~~~L~~dP~~R~t~~e~l~ 419 (492)
....++.. ....++.++.++|.+||..+|++|||+.++++
T Consensus 221 ----~~~~~~~~--------~~~~~~~~~~~~i~~cl~~~p~~Rp~~~~il~ 260 (267)
T cd08224 221 ----EKCDYPPL--------PADHYSEELRDLVSRCINPDPEKRPDISYVLQ 260 (267)
T ss_pred ----hcCCCCCC--------ChhhcCHHHHHHHHHHcCCCcccCCCHHHHHH
Confidence 00001100 01246789999999999999999999998874
No 311
>cd05068 PTKc_Frk_like Catalytic domain of Fyn-related kinase-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Human Fyn-related kinase (Frk) and similar proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Frk and Srk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins a
Probab=100.00 E-value=2.9e-38 Score=305.33 Aligned_cols=244 Identities=23% Similarity=0.318 Sum_probs=191.7
Q ss_pred cceeEeeeeccCCceEEEEEEEcCCCCEEEEEEeccch---hhHHHHHHHHHHcCCCCccccceeeeeccCCCceEEEEE
Q 011138 137 ISYMAERVVGTGSFGVVFQAKCLETGDSVAIKKVLQDK---RYKNRELQIMRLLNHPNVVSLKHCFFSTTEKDELYLNLV 213 (492)
Q Consensus 137 ~~y~~~~~lG~G~fg~Vy~~~~~~~g~~vAiK~~~~~~---~~~~~E~~il~~l~h~nIv~l~~~~~~~~~~~~~~~~lV 213 (492)
.+|.+.+.||+|+||.||+|.+. +++.||+|.+.... ....+|+.+++.++||||+++++++ .....+++|
T Consensus 6 ~~~~~~~~lg~g~~~~v~~~~~~-~~~~v~iK~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~-----~~~~~~~lv 79 (261)
T cd05068 6 TSIQLLRKLGAGQFGEVWEGLWN-NTTPVAVKTLKPGTMDPKDFLAEAQIMKKLRHPKLIQLYAVC-----TLEEPIYIV 79 (261)
T ss_pred hheeeEEEecccCCccEEEEEec-CCeEEEEEeeCCCcccHHHHHHHHHHHHHCCCCCccceeEEE-----ecCCCeeee
Confidence 46999999999999999999864 45789999986532 3456799999999999999999987 333458899
Q ss_pred eeech-hhHHHHhhhhhhcCCCcCHHHHHHHHHHHHHHHHHHHhhCCcccCCCCCCceEEcCCCCcEEEeeecCccccCC
Q 011138 214 LEYIS-ETVYRVSKHYTRMNQHVPILYVQLYTYQICRALNYLHHVVGVCHRDIKPQNLLVNPHTHQLKICDFGSAKMLVP 292 (492)
Q Consensus 214 ~E~~~-~~l~~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~yLH~~~givHrDlKp~NILl~~~~~~vkL~DFG~a~~~~~ 292 (492)
|||+. +.+.+.+... ....+++..+..++.|++.||.|||+ +||+||||||+||+++.++ .+||+|||+++....
T Consensus 80 ~e~~~~~~L~~~~~~~--~~~~~~~~~~~~~~~~i~~~l~~lH~-~~i~H~dl~p~Nil~~~~~-~~~l~dfg~~~~~~~ 155 (261)
T cd05068 80 TELMKYGSLLEYLQGG--AGRALKLPQLIDMAAQVASGMAYLEA-QNYIHRDLAARNVLVGENN-ICKVADFGLARVIKE 155 (261)
T ss_pred eecccCCcHHHHHhcc--CCCCCCHHHHHHHHHHHHHHHHHHHh-CCeeeccCCcceEEEcCCC-CEEECCcceEEEccC
Confidence 99996 4555544321 13468899999999999999999997 9999999999999999887 799999999987642
Q ss_pred CCCC--ccceeccCccCchhhcCCCCCCcchhhHHHHHHHHHHHh-CCCCCCCCChHHHHHHHHHHhCCCCHHHHhhcCC
Q 011138 293 GEPN--ISYICSRYYRAPELIFGATEYTTAIDMWSIGCVLAELLL-GQPLFPGESGVDQLVEIIKILGTPTREEIKCMNP 369 (492)
Q Consensus 293 ~~~~--~~~~gt~~y~aPE~~~~~~~~~~~~DvwSlGvil~ell~-G~~pf~~~~~~~~~~~i~~~~g~p~~~~~~~~~~ 369 (492)
.... .....+..|+|||.+.+. .++.++|||||||++|+|++ |+.||.+.+....+..+.+..
T Consensus 156 ~~~~~~~~~~~~~~y~aPE~~~~~-~~~~~~Di~slG~~l~el~t~g~~p~~~~~~~~~~~~~~~~~------------- 221 (261)
T cd05068 156 DIYEAREGAKFPIKWTAPEAALYN-RFSIKSDVWSFGILLTEIVTYGRMPYPGMTNAEVLQQVDQGY------------- 221 (261)
T ss_pred CcccccCCCcCceeccCccccccC-CCCchhhHHHHHHHHHHHHhcCCCCCCCCCHHHHHHHHHcCC-------------
Confidence 2111 111224579999988654 48999999999999999999 999998877655444442210
Q ss_pred CCcccCCCcccCCCcccccCCCCChhHhhhhccccccCCCCcCCHHHhhC
Q 011138 370 NYTEFKFPQIKAHPWHKIFHKRMPPEALDLVSRLLQYSPSLRCTALEACA 419 (492)
Q Consensus 370 ~~~~~~~~~~~~~~~~~~~~~~~s~~~~~Li~~~L~~dP~~R~t~~e~l~ 419 (492)
..+ ....+++.+.+++.+||..||.+||++.+++.
T Consensus 222 -----~~~----------~~~~~~~~~~~li~~~l~~~P~~Rp~~~~l~~ 256 (261)
T cd05068 222 -----RMP----------CPPGCPKELYDIMLDCWKEDPDDRPTFETLQW 256 (261)
T ss_pred -----CCC----------CCCcCCHHHHHHHHHHhhcCcccCCCHHHHHH
Confidence 000 11346889999999999999999999999864
No 312
>cd05059 PTKc_Tec_like Catalytic domain of Tec-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Tyrosine kinase expressed in hepatocellular carcinoma (Tec) subfamily; catalytic (c) domain. The Tec subfamily is composed of Tec, Btk, Bmx (Etk), Itk (Tsk, Emt), Rlk (Txk), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tec kinases are cytoplasmic (or nonreceptor) tyr kinases (nRTKs) with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds the products of PI3K and allows
Probab=100.00 E-value=1.5e-38 Score=306.51 Aligned_cols=243 Identities=21% Similarity=0.323 Sum_probs=190.5
Q ss_pred ceeEeeeeccCCceEEEEEEEcCCCCEEEEEEeccc---hhhHHHHHHHHHHcCCCCccccceeeeeccCCCceEEEEEe
Q 011138 138 SYMAERVVGTGSFGVVFQAKCLETGDSVAIKKVLQD---KRYKNRELQIMRLLNHPNVVSLKHCFFSTTEKDELYLNLVL 214 (492)
Q Consensus 138 ~y~~~~~lG~G~fg~Vy~~~~~~~g~~vAiK~~~~~---~~~~~~E~~il~~l~h~nIv~l~~~~~~~~~~~~~~~~lV~ 214 (492)
+|.+.+.||+|+||.||+|.+. ++..+|+|.+... .....+|+.+++.++||||+++++++ ....+.|+||
T Consensus 5 ~~~~~~~lg~G~~~~v~~~~~~-~~~~~~iK~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~-----~~~~~~~lv~ 78 (256)
T cd05059 5 ELTFLKELGSGQFGVVHLGKWR-GKIDVAIKMIREGAMSEDDFIEEAKVMMKLSHPNLVQLYGVC-----TKQRPIFIVT 78 (256)
T ss_pred HcchhhhhccCCCceEEEeEec-CCccEEEEEeccCCCCHHHHHHHHHHHHhCCCCCEEEEEEEE-----cCCCceEEEE
Confidence 5889999999999999999875 5678999987543 23455799999999999999999887 4445688999
Q ss_pred eechhh-HHHHhhhhhhcCCCcCHHHHHHHHHHHHHHHHHHHhhCCcccCCCCCCceEEcCCCCcEEEeeecCccccCCC
Q 011138 215 EYISET-VYRVSKHYTRMNQHVPILYVQLYTYQICRALNYLHHVVGVCHRDIKPQNLLVNPHTHQLKICDFGSAKMLVPG 293 (492)
Q Consensus 215 E~~~~~-l~~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~yLH~~~givHrDlKp~NILl~~~~~~vkL~DFG~a~~~~~~ 293 (492)
||++++ +.+.+.. ....+++..+..++.||+.||.|||+ +||+||||||+||+++.++ .+||+|||+++.....
T Consensus 79 e~~~~~~L~~~l~~---~~~~~~~~~~~~i~~qi~~~l~~lH~-~~i~H~dl~p~ni~i~~~~-~~kl~dfg~~~~~~~~ 153 (256)
T cd05059 79 EYMANGCLLNYLRE---RKGKLGTEWLLDMCSDVCEAMEYLES-NGFIHRDLAARNCLVGEDN-VVKVSDFGLARYVLDD 153 (256)
T ss_pred ecCCCCCHHHHHHh---cccCCCHHHHHHHHHHHHHHHHHHHH-CCcccccccHhhEEECCCC-cEEECCcccceecccc
Confidence 999765 4443322 22367889999999999999999997 9999999999999999887 7999999998765332
Q ss_pred CCC--ccceeccCccCchhhcCCCCCCcchhhHHHHHHHHHHHh-CCCCCCCCChHHHHHHHHHHhCCCCHHHHhhcCCC
Q 011138 294 EPN--ISYICSRYYRAPELIFGATEYTTAIDMWSIGCVLAELLL-GQPLFPGESGVDQLVEIIKILGTPTREEIKCMNPN 370 (492)
Q Consensus 294 ~~~--~~~~gt~~y~aPE~~~~~~~~~~~~DvwSlGvil~ell~-G~~pf~~~~~~~~~~~i~~~~g~p~~~~~~~~~~~ 370 (492)
... ....++..|+|||.+.+. .++.++|||||||++|+|++ |..||...+..+....+....
T Consensus 154 ~~~~~~~~~~~~~y~~Pe~~~~~-~~~~~~Di~slG~il~~l~~~g~~p~~~~~~~~~~~~~~~~~-------------- 218 (256)
T cd05059 154 QYTSSQGTKFPVKWAPPEVFDYS-RFSSKSDVWSFGVLMWEVFSEGKMPYERFSNSEVVESVSAGY-------------- 218 (256)
T ss_pred cccccCCCCCCccccCHHHhccC-CCCchhhHHHHHHHHHHHhccCCCCCCCCCHHHHHHHHHcCC--------------
Confidence 211 112234579999998654 48999999999999999998 899998776655444332210
Q ss_pred CcccCCCcccCCCcccccCCCCChhHhhhhccccccCCCCcCCHHHhhCC
Q 011138 371 YTEFKFPQIKAHPWHKIFHKRMPPEALDLVSRLLQYSPSLRCTALEACAH 420 (492)
Q Consensus 371 ~~~~~~~~~~~~~~~~~~~~~~s~~~~~Li~~~L~~dP~~R~t~~e~l~H 420 (492)
.. ..+...+.++.+|+.+||..+|++|||+.++++.
T Consensus 219 ----~~----------~~~~~~~~~~~~li~~cl~~~p~~Rpt~~~~l~~ 254 (256)
T cd05059 219 ----RL----------YRPKLAPTEVYTIMYSCWHEKPEDRPAFKKLLSQ 254 (256)
T ss_pred ----cC----------CCCCCCCHHHHHHHHHHhcCChhhCcCHHHHHHH
Confidence 00 0113468899999999999999999999999863
No 313
>cd05033 PTKc_EphR Catalytic domain of Ephrin Receptor Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). They can be classified into two classes (EphA and EphB), according to their extracellular sequences, which largely correspond to binding preferences for either GPI-anchored ephrin-A ligands or transmembrane ephrin-B ligands. Vertebrates have ten EphA and six EhpB receptors, which display promiscuous ligand interactions within each class. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment
Probab=100.00 E-value=2.2e-38 Score=307.05 Aligned_cols=245 Identities=23% Similarity=0.321 Sum_probs=191.2
Q ss_pred cceeEeeeeccCCceEEEEEEEcCC---CCEEEEEEeccch-----hhHHHHHHHHHHcCCCCccccceeeeeccCCCce
Q 011138 137 ISYMAERVVGTGSFGVVFQAKCLET---GDSVAIKKVLQDK-----RYKNRELQIMRLLNHPNVVSLKHCFFSTTEKDEL 208 (492)
Q Consensus 137 ~~y~~~~~lG~G~fg~Vy~~~~~~~---g~~vAiK~~~~~~-----~~~~~E~~il~~l~h~nIv~l~~~~~~~~~~~~~ 208 (492)
.+|.+.+.||+|+||.||+|.+..+ ...||||.+.... ....+|+.+++.++||||+++++++ ....
T Consensus 4 ~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~vaik~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~-----~~~~ 78 (266)
T cd05033 4 SYVTIEKVIGGGEFGEVCRGRLKLPGKKEIDVAIKTLKAGSSDKQRLDFLTEASIMGQFDHPNIIRLEGVV-----TKSR 78 (266)
T ss_pred HHceeeeEecCCccceEEEEEEccCCCCcceEEEEEcCCCCChHHHHHHHHHHHHHHhCCCCCcceEeEEE-----ecCC
Confidence 4689999999999999999998654 4579999875432 2345699999999999999999987 3344
Q ss_pred EEEEEeeechhh-HHHHhhhhhhcCCCcCHHHHHHHHHHHHHHHHHHHhhCCcccCCCCCCceEEcCCCCcEEEeeecCc
Q 011138 209 YLNLVLEYISET-VYRVSKHYTRMNQHVPILYVQLYTYQICRALNYLHHVVGVCHRDIKPQNLLVNPHTHQLKICDFGSA 287 (492)
Q Consensus 209 ~~~lV~E~~~~~-l~~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~yLH~~~givHrDlKp~NILl~~~~~~vkL~DFG~a 287 (492)
..++||||+.++ +.+.+. .....+++..+..++.|++.||.|||+ +||+||||||+|||++.++ .+||+|||++
T Consensus 79 ~~~iv~e~~~~~~L~~~~~---~~~~~~~~~~~~~~~~~l~~~l~~Lh~-~~i~H~di~p~nili~~~~-~~~l~dfg~~ 153 (266)
T cd05033 79 PVMIITEYMENGSLDKFLR---ENDGKFTVGQLVGMLRGIASGMKYLSE-MNYVHRDLAARNILVNSNL-VCKVSDFGLS 153 (266)
T ss_pred ceEEEEEcCCCCCHHHHHH---hccCCCCHHHHHHHHHHHHHHHHHHHh-CCcccCCCCcceEEEcCCC-CEEECccchh
Confidence 588999999875 333322 223468899999999999999999997 9999999999999999887 7999999999
Q ss_pred cccCCCCCC-c--cceeccCccCchhhcCCCCCCcchhhHHHHHHHHHHHh-CCCCCCCCChHHHHHHHHHHhCCCCHHH
Q 011138 288 KMLVPGEPN-I--SYICSRYYRAPELIFGATEYTTAIDMWSIGCVLAELLL-GQPLFPGESGVDQLVEIIKILGTPTREE 363 (492)
Q Consensus 288 ~~~~~~~~~-~--~~~gt~~y~aPE~~~~~~~~~~~~DvwSlGvil~ell~-G~~pf~~~~~~~~~~~i~~~~g~p~~~~ 363 (492)
......... . ...++..|+|||.+.+. .++.++|||||||++|+|++ |..||......+....+.+.
T Consensus 154 ~~~~~~~~~~~~~~~~~~~~y~~Pe~~~~~-~~~~~~Dv~slG~~l~~l~~~g~~p~~~~~~~~~~~~~~~~-------- 224 (266)
T cd05033 154 RRLEDSEATYTTKGGKIPIRWTAPEAIAYR-KFTSASDVWSFGIVMWEVMSYGERPYWDMSNQDVIKAVEDG-------- 224 (266)
T ss_pred hcccccccceeccCCCCCccccChhhhccC-CCccccchHHHHHHHHHHHccCCCCCCCCCHHHHHHHHHcC--------
Confidence 876421111 1 22345789999998654 48999999999999999997 99999876655444433221
Q ss_pred HhhcCCCCcccCCCcccCCCcccccCCCCChhHhhhhccccccCCCCcCCHHHhhCC
Q 011138 364 IKCMNPNYTEFKFPQIKAHPWHKIFHKRMPPEALDLVSRLLQYSPSLRCTALEACAH 420 (492)
Q Consensus 364 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~Li~~~L~~dP~~R~t~~e~l~H 420 (492)
...+ .+...++.+.+|+.+||+.||++||++.+++++
T Consensus 225 ----------~~~~----------~~~~~~~~l~~li~~cl~~~p~~Rp~~~ei~~~ 261 (266)
T cd05033 225 ----------YRLP----------PPMDCPSALYQLMLDCWQKDRNERPTFSQIVST 261 (266)
T ss_pred ----------CCCC----------CCCCCCHHHHHHHHHHcCCCcccCcCHHHHHHH
Confidence 0011 112468899999999999999999999999864
No 314
>PHA02882 putative serine/threonine kinase; Provisional
Probab=100.00 E-value=4.2e-38 Score=310.12 Aligned_cols=253 Identities=18% Similarity=0.213 Sum_probs=184.1
Q ss_pred ceeEeeeeccCCceEEEEEEEcCC---CCEEEEEEeccchhhHH---------------HHHHHHHHcCCCCccccceee
Q 011138 138 SYMAERVVGTGSFGVVFQAKCLET---GDSVAIKKVLQDKRYKN---------------RELQIMRLLNHPNVVSLKHCF 199 (492)
Q Consensus 138 ~y~~~~~lG~G~fg~Vy~~~~~~~---g~~vAiK~~~~~~~~~~---------------~E~~il~~l~h~nIv~l~~~~ 199 (492)
+|.+.++||+|+||.||+|.+..+ +..+|+|+......... .+...+..++|+||++++++.
T Consensus 13 ~y~i~~~LG~G~fG~Vy~~~~~~~~~~~~~~~~k~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~h~~i~~~~~~~ 92 (294)
T PHA02882 13 EWKIDKLIGCGGFGCVYETQCASDHCINNQAVAKIENLENETIVMETLVYNNIYDIDKIALWKNIHNIDHLGIPKYYGCG 92 (294)
T ss_pred ceEEeeEEecCCCceEEEEEEcCCcccccceEEEeccccCCchhhHHHHHHhhhhHHHHHHHHHhccCCCCCCCcEEEee
Confidence 599999999999999999998877 67788886432221111 122334556899999999876
Q ss_pred eeccCCCceEEEEEeeechhhHHHHhhhhhhcCCCcCHHHHHHHHHHHHHHHHHHHhhCCcccCCCCCCceEEcCCCCcE
Q 011138 200 FSTTEKDELYLNLVLEYISETVYRVSKHYTRMNQHVPILYVQLYTYQICRALNYLHHVVGVCHRDIKPQNLLVNPHTHQL 279 (492)
Q Consensus 200 ~~~~~~~~~~~~lV~E~~~~~l~~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~yLH~~~givHrDlKp~NILl~~~~~~v 279 (492)
.... ....+.+++||++...+...... ....++..++.++.||+.||.|||+ +||+||||||+|||++.++ .+
T Consensus 93 ~~~~-~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~i~~qi~~~l~~lH~-~~iiHrDiKp~Nill~~~~-~~ 165 (294)
T PHA02882 93 SFKR-CRMYYRFILLEKLVENTKEIFKR----IKCKNKKLIKNIMKDMLTTLEYIHE-HGISHGDIKPENIMVDGNN-RG 165 (294)
T ss_pred eEec-CCceEEEEEEehhccCHHHHHHh----hccCCHHHHHHHHHHHHHHHHHHHh-CCeecCCCCHHHEEEcCCC-cE
Confidence 4433 22345678999887665554332 2235677888999999999999997 9999999999999999877 79
Q ss_pred EEeeecCccccCCCC--------CCccceeccCccCchhhcCCCCCCcchhhHHHHHHHHHHHhCCCCCCCCChHHHHHH
Q 011138 280 KICDFGSAKMLVPGE--------PNISYICSRYYRAPELIFGATEYTTAIDMWSIGCVLAELLLGQPLFPGESGVDQLVE 351 (492)
Q Consensus 280 kL~DFG~a~~~~~~~--------~~~~~~gt~~y~aPE~~~~~~~~~~~~DvwSlGvil~ell~G~~pf~~~~~~~~~~~ 351 (492)
+|+|||+|+...... ......||+.|+|||++.+. .++.++|||||||++|||++|.+||.+......+..
T Consensus 166 ~l~DFGla~~~~~~~~~~~~~~~~~~~~~gt~~y~ape~~~~~-~~~~~~DiwSlG~~l~el~~g~~P~~~~~~~~~~~~ 244 (294)
T PHA02882 166 YIIDYGIASHFIIHGKHIEYSKEQKDLHRGTLYYAGLDAHNGA-CVTRRGDLESLGYCMLKWAGIKLPWKGFGHNGNLIH 244 (294)
T ss_pred EEEEcCCceeeccCCcccccccccccccCCCccccCHHHhCCC-CCCcHHHHHHHHHHHHHHHhCCCCCCccccchHHHH
Confidence 999999997653221 11234699999999998654 489999999999999999999999988743333222
Q ss_pred HHHHhCCCCHHHHhhcCCCCcccCCCcccCCCcccccCCCCChhHhhhhccccccCCCCcCCHHHhhC
Q 011138 352 IIKILGTPTREEIKCMNPNYTEFKFPQIKAHPWHKIFHKRMPPEALDLVSRLLQYSPSLRCTALEACA 419 (492)
Q Consensus 352 i~~~~g~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~Li~~~L~~dP~~R~t~~e~l~ 419 (492)
..+. ..+..... ... ..+..++++.+++..|+..+|++||+..++++
T Consensus 245 ~~~~------~~~~~~~~--~~~-------------~~~~~~~~~~~~~~~~~~~~~~~rp~~~~l~~ 291 (294)
T PHA02882 245 AAKC------DFIKRLHE--GKI-------------KIKNANKFIYDFIECVTKLSYEEKPDYDALIK 291 (294)
T ss_pred HhHH------HHHHHhhh--hhh-------------ccCCCCHHHHHHHHHHHhCCCCCCCCHHHHHH
Confidence 2110 00000000 000 11245788999999999999999999999864
No 315
>KOG1187 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=1.1e-38 Score=319.81 Aligned_cols=262 Identities=27% Similarity=0.350 Sum_probs=189.3
Q ss_pred ccceeEeeeeccCCceEEEEEEEcCCCCEEEEEEeccc----hhhHHHHHHHHHHcCCCCccccceeeeeccCCCceEEE
Q 011138 136 TISYMAERVVGTGSFGVVFQAKCLETGDSVAIKKVLQD----KRYKNRELQIMRLLNHPNVVSLKHCFFSTTEKDELYLN 211 (492)
Q Consensus 136 ~~~y~~~~~lG~G~fg~Vy~~~~~~~g~~vAiK~~~~~----~~~~~~E~~il~~l~h~nIv~l~~~~~~~~~~~~~~~~ 211 (492)
+.+|....+||+|+||.||+|.. .+|..||||++... ...+.+|+.++.+++|||+|+|++||..... ..+
T Consensus 74 T~~Fs~~~~ig~Ggfg~VYkG~l-~~~~~vAVK~~~~~~~~~~~eF~~Ei~~ls~l~H~Nlv~LlGyC~e~~~----~~~ 148 (361)
T KOG1187|consen 74 TNNFSESNLIGEGGFGTVYKGVL-SDGTVVAVKRLSSNSGQGEREFLNEVEILSRLRHPNLVKLLGYCLEGGE----HRL 148 (361)
T ss_pred HhCCchhcceecCCCeEEEEEEE-CCCCEEEEEEecCCCCcchhHHHHHHHHHhcCCCcCcccEEEEEecCCc----eEE
Confidence 45677788999999999999985 45599999988542 3457899999999999999999999954331 478
Q ss_pred EEeeechhhHHHHhhhhhhcCCCcCHHHHHHHHHHHHHHHHHHHhhC--CcccCCCCCCceEEcCCCCcEEEeeecCccc
Q 011138 212 LVLEYISETVYRVSKHYTRMNQHVPILYVQLYTYQICRALNYLHHVV--GVCHRDIKPQNLLVNPHTHQLKICDFGSAKM 289 (492)
Q Consensus 212 lV~E~~~~~l~~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~yLH~~~--givHrDlKp~NILl~~~~~~vkL~DFG~a~~ 289 (492)
||+||+..+.+....+..... .++|.....|+.++++||+|||... .|||||||++|||+|.+. +.||+|||+|+.
T Consensus 149 LVYEym~nGsL~d~L~~~~~~-~L~W~~R~kIa~g~A~gL~yLH~~~~~~iiHrDiKssNILLD~~~-~aKlsDFGLa~~ 226 (361)
T KOG1187|consen 149 LVYEYMPNGSLEDHLHGKKGE-PLDWETRLKIALGAARGLAYLHEGCPPPIIHRDIKSSNILLDEDF-NAKLSDFGLAKL 226 (361)
T ss_pred EEEEccCCCCHHHHhCCCCCC-CCCHHHHHHHHHHHHHHHHHHccCCCCCEecCCCCHHHeeECCCC-CEEccCccCccc
Confidence 999999965444333322212 7899999999999999999999734 399999999999999888 899999999976
Q ss_pred cCC-CCCCccc-eeccCccCchhhcCCCCCCcchhhHHHHHHHHHHHhCCCCCCCCC--hHHHHHHHH-HHhCCCCHHHH
Q 011138 290 LVP-GEPNISY-ICSRYYRAPELIFGATEYTTAIDMWSIGCVLAELLLGQPLFPGES--GVDQLVEII-KILGTPTREEI 364 (492)
Q Consensus 290 ~~~-~~~~~~~-~gt~~y~aPE~~~~~~~~~~~~DvwSlGvil~ell~G~~pf~~~~--~~~~~~~i~-~~~g~p~~~~~ 364 (492)
... ....... .||..|+|||.+.. ...+.++|||||||+|.||++|+.+.+... ....+.... ..+...
T Consensus 227 ~~~~~~~~~~~~~gt~gY~~PEy~~~-g~lt~KsDVySFGVvllElitgr~~~d~~~~~~~~~l~~w~~~~~~~~----- 300 (361)
T KOG1187|consen 227 GPEGDTSVSTTVMGTFGYLAPEYAST-GKLTEKSDVYSFGVVLLELITGRKAVDQSRPRGELSLVEWAKPLLEEG----- 300 (361)
T ss_pred CCccccceeeecCCCCccCChhhhcc-CCcCcccccccchHHHHHHHhCCcccCCCCCcccccHHHHHHHHHHCc-----
Confidence 544 3332233 89999999999965 458999999999999999999998887543 111122211 111111
Q ss_pred hhcCCCCcccCCCcccCCCcccccCC-CCChhHhhhhccccccCCCCcCCHHHhhC
Q 011138 365 KCMNPNYTEFKFPQIKAHPWHKIFHK-RMPPEALDLVSRLLQYSPSLRCTALEACA 419 (492)
Q Consensus 365 ~~~~~~~~~~~~~~~~~~~~~~~~~~-~~s~~~~~Li~~~L~~dP~~R~t~~e~l~ 419 (492)
...++.=|.+... .+.. ..-..+..+..+|++.+|.+||++.|++.
T Consensus 301 -----~~~eiiD~~l~~~----~~~~~~~~~~~~~~a~~C~~~~~~~RP~m~~Vv~ 347 (361)
T KOG1187|consen 301 -----KLREIVDPRLKEG----EYPDEKEVKKLAELALRCLRPDPKERPTMSQVVK 347 (361)
T ss_pred -----chhheeCCCccCC----CCChHHHHHHHHHHHHHHcCcCCCcCcCHHHHHH
Confidence 0111111111100 0000 01123567888999999999999999743
No 316
>cd05055 PTKc_PDGFR Catalytic domain of the Protein Tyrosine Kinases, Platelet Derived Growth Factor Receptors. Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) subfamily; catalytic (c) domain. The PDGFR subfamily consists of PDGFR alpha, PDGFR beta, KIT, CSF-1R, the mammalian FLT3, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. PDGFR kinase domains are autoinhibited by their juxtamembrane regions containing tyr residues. The binding to their ligands leads to recept
Probab=100.00 E-value=5.1e-38 Score=310.72 Aligned_cols=249 Identities=24% Similarity=0.369 Sum_probs=192.5
Q ss_pred ccccceeEeeeeccCCceEEEEEEE-----cCCCCEEEEEEeccch-----hhHHHHHHHHHHc-CCCCccccceeeeec
Q 011138 134 KQTISYMAERVVGTGSFGVVFQAKC-----LETGDSVAIKKVLQDK-----RYKNRELQIMRLL-NHPNVVSLKHCFFST 202 (492)
Q Consensus 134 ~~~~~y~~~~~lG~G~fg~Vy~~~~-----~~~g~~vAiK~~~~~~-----~~~~~E~~il~~l-~h~nIv~l~~~~~~~ 202 (492)
....+|.+.+.||+|+||.||+|.+ ..++..||+|.+.... ....+|+.+++++ +||||+++++++.
T Consensus 32 ~~~~~~~~~~~ig~G~~g~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~-- 109 (302)
T cd05055 32 FPRNNLSFGKTLGAGAFGKVVEATAYGLSKSDAVMKVAVKMLKPTAHSSEREALMSELKIMSHLGNHENIVNLLGACT-- 109 (302)
T ss_pred ccHHHeEEcceeeccCCeeEEEEEEecCCCCCceeEEEEEecCccCChHHHHHHHHHHHHHHhccCCCCcceEEEEEe--
Confidence 3345799999999999999999975 2355689999875432 2345799999999 7999999999883
Q ss_pred cCCCceEEEEEeeechhh-HHHHhhhhhhcCCCcCHHHHHHHHHHHHHHHHHHHhhCCcccCCCCCCceEEcCCCCcEEE
Q 011138 203 TEKDELYLNLVLEYISET-VYRVSKHYTRMNQHVPILYVQLYTYQICRALNYLHHVVGVCHRDIKPQNLLVNPHTHQLKI 281 (492)
Q Consensus 203 ~~~~~~~~~lV~E~~~~~-l~~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~yLH~~~givHrDlKp~NILl~~~~~~vkL 281 (492)
....+++||||+.++ +...+.. .....+++..+..++.||+.||.|||+ +||+|+||||+|||++.++ .+||
T Consensus 110 ---~~~~~~lv~e~~~~~~L~~~i~~--~~~~~l~~~~~~~i~~~i~~~l~~lH~-~~ivH~dlkp~Nil~~~~~-~~~l 182 (302)
T cd05055 110 ---IGGPILVITEYCCYGDLLNFLRR--KRESFLTLEDLLSFSYQVAKGMAFLAS-KNCIHRDLAARNVLLTHGK-IVKI 182 (302)
T ss_pred ---cCCceEEEEEcCCCCcHHHHHHh--CCCCCCCHHHHHHHHHHHHHHHHHHHH-CCeehhhhccceEEEcCCC-eEEE
Confidence 334589999999854 4444322 112337899999999999999999997 9999999999999999777 7999
Q ss_pred eeecCccccCCCCC---CccceeccCccCchhhcCCCCCCcchhhHHHHHHHHHHHh-CCCCCCCCChHHHHHHHHHHhC
Q 011138 282 CDFGSAKMLVPGEP---NISYICSRYYRAPELIFGATEYTTAIDMWSIGCVLAELLL-GQPLFPGESGVDQLVEIIKILG 357 (492)
Q Consensus 282 ~DFG~a~~~~~~~~---~~~~~gt~~y~aPE~~~~~~~~~~~~DvwSlGvil~ell~-G~~pf~~~~~~~~~~~i~~~~g 357 (492)
+|||+++....... .....++..|+|||.+.+.. ++.++|||||||++|+|++ |..||.+....+.+.+....
T Consensus 183 ~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~-~~~~~DiwslGvil~el~t~g~~p~~~~~~~~~~~~~~~~-- 259 (302)
T cd05055 183 CDFGLARDIMNDSNYVVKGNARLPVKWMAPESIFNCV-YTFESDVWSYGILLWEIFSLGSNPYPGMPVDSKFYKLIKE-- 259 (302)
T ss_pred CCCcccccccCCCceeecCCCCcccccCCHhhhccCC-CCcHhHHHHHHHHHHHHHhCCCCCcCCCCchHHHHHHHHc--
Confidence 99999976533221 11234577899999986554 8999999999999999998 99999877655444443321
Q ss_pred CCCHHHHhhcCCCCcccCCCcccCCCcccccCCCCChhHhhhhccccccCCCCcCCHHHhhC
Q 011138 358 TPTREEIKCMNPNYTEFKFPQIKAHPWHKIFHKRMPPEALDLVSRLLQYSPSLRCTALEACA 419 (492)
Q Consensus 358 ~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~Li~~~L~~dP~~R~t~~e~l~ 419 (492)
.+.. ..+..+++++.+|+.+||..||++|||+.++++
T Consensus 260 ---------------~~~~----------~~~~~~~~~~~~li~~cl~~~p~~Rpt~~ell~ 296 (302)
T cd05055 260 ---------------GYRM----------AQPEHAPAEIYDIMKTCWDADPLKRPTFKQIVQ 296 (302)
T ss_pred ---------------CCcC----------CCCCCCCHHHHHHHHHHcCCCchhCcCHHHHHH
Confidence 0000 012346889999999999999999999999975
No 317
>cd05148 PTKc_Srm_Brk Catalytic domain of the Protein Tyrosine Kinases, Srm and Brk. Protein Tyrosine Kinase (PTK) family; Src-related kinase lacking C-terminal regulatory tyrosine and N-terminal myristylation sites (Srm) and breast tumor kinase (Brk, also called protein tyrosine kinase 6); catalytic (c) domains. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Srm and Brk are a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases in general contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr; they are activated by autophosphorylation at the tyr kinase dom
Probab=100.00 E-value=1.5e-38 Score=307.11 Aligned_cols=245 Identities=22% Similarity=0.318 Sum_probs=195.8
Q ss_pred ccceeEeeeeccCCceEEEEEEEcCCCCEEEEEEeccch----hhHHHHHHHHHHcCCCCccccceeeeeccCCCceEEE
Q 011138 136 TISYMAERVVGTGSFGVVFQAKCLETGDSVAIKKVLQDK----RYKNRELQIMRLLNHPNVVSLKHCFFSTTEKDELYLN 211 (492)
Q Consensus 136 ~~~y~~~~~lG~G~fg~Vy~~~~~~~g~~vAiK~~~~~~----~~~~~E~~il~~l~h~nIv~l~~~~~~~~~~~~~~~~ 211 (492)
..+|.+.+.||.|+||.||+|.+.. +..+|+|.+.... ....+|+.+++.++|+||+++++++ .+....+
T Consensus 5 ~~~y~~~~~ig~g~~~~vy~~~~~~-~~~~~~k~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~-----~~~~~~~ 78 (261)
T cd05148 5 REEFTLERKLGSGYFGEVWEGLWKN-RVRVAIKILKSDDLLKQQDFQKEVQALKRLRHKHLISLFAVC-----SVGEPVY 78 (261)
T ss_pred HHHHHHhhhhccCCCccEEEeEecC-CCcEEEEeccccchhhHHHHHHHHHHHhcCCCcchhheeeeE-----ecCCCeE
Confidence 3469999999999999999999877 8999999886443 3456799999999999999999987 3444588
Q ss_pred EEeeechh-hHHHHhhhhhhcCCCcCHHHHHHHHHHHHHHHHHHHhhCCcccCCCCCCceEEcCCCCcEEEeeecCcccc
Q 011138 212 LVLEYISE-TVYRVSKHYTRMNQHVPILYVQLYTYQICRALNYLHHVVGVCHRDIKPQNLLVNPHTHQLKICDFGSAKML 290 (492)
Q Consensus 212 lV~E~~~~-~l~~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~yLH~~~givHrDlKp~NILl~~~~~~vkL~DFG~a~~~ 290 (492)
+||||+++ .+.+.+... ....+++..+..++.||+.||.|||+ +||+||||||+|||++.++ .+||+|||.+...
T Consensus 79 lv~e~~~~~~L~~~~~~~--~~~~~~~~~~~~~~~~i~~al~~lH~-~~i~h~dl~~~nilv~~~~-~~kl~d~g~~~~~ 154 (261)
T cd05148 79 IITELMEKGSLLAFLRSP--EGQVLPVASLIDMACQVAEGMAYLEE-QNSIHRDLAARNILVGEDL-VCKVADFGLARLI 154 (261)
T ss_pred EEEeecccCCHHHHHhcC--CCCCCCHHHHHHHHHHHHHHHHHHHH-CCeeccccCcceEEEcCCc-eEEEccccchhhc
Confidence 99999986 555544321 23567888999999999999999997 9999999999999999887 7999999999765
Q ss_pred CCCCC-CccceeccCccCchhhcCCCCCCcchhhHHHHHHHHHHHh-CCCCCCCCChHHHHHHHHHHhCCCCHHHHhhcC
Q 011138 291 VPGEP-NISYICSRYYRAPELIFGATEYTTAIDMWSIGCVLAELLL-GQPLFPGESGVDQLVEIIKILGTPTREEIKCMN 368 (492)
Q Consensus 291 ~~~~~-~~~~~gt~~y~aPE~~~~~~~~~~~~DvwSlGvil~ell~-G~~pf~~~~~~~~~~~i~~~~g~p~~~~~~~~~ 368 (492)
..... .....++..|+|||.+.+. .++.++|||||||++|+|++ |+.||.+.+..+.+..+......
T Consensus 155 ~~~~~~~~~~~~~~~~~~PE~~~~~-~~~~~~DiwslG~~l~~l~~~g~~p~~~~~~~~~~~~~~~~~~~---------- 223 (261)
T cd05148 155 KEDVYLSSDKKIPYKWTAPEAASHG-TFSTKSDVWSFGILLYEMFTYGQVPYPGMNNHEVYDQITAGYRM---------- 223 (261)
T ss_pred CCccccccCCCCceEecCHHHHccC-CCCchhhHHHHHHHHHHHHcCCCCCCCcCCHHHHHHHHHhCCcC----------
Confidence 33221 1123456789999998654 58899999999999999998 89999887766655554321100
Q ss_pred CCCcccCCCcccCCCcccccCCCCChhHhhhhccccccCCCCcCCHHHhhC
Q 011138 369 PNYTEFKFPQIKAHPWHKIFHKRMPPEALDLVSRLLQYSPSLRCTALEACA 419 (492)
Q Consensus 369 ~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~Li~~~L~~dP~~R~t~~e~l~ 419 (492)
..+..+++++.++|.+||+.||.+|||+.++++
T Consensus 224 ------------------~~~~~~~~~~~~~i~~~l~~~p~~Rpt~~~l~~ 256 (261)
T cd05148 224 ------------------PCPAKCPQEIYKIMLECWAAEPEDRPSFKALRE 256 (261)
T ss_pred ------------------CCCCCCCHHHHHHHHHHcCCCchhCcCHHHHHH
Confidence 012346889999999999999999999999875
No 318
>cd05583 STKc_MSK_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase. Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, in response to various stimuli such as growth factors, hormones, neurotransmitters, cellular stress, and pro-inflammatory cytokines
Probab=100.00 E-value=4.9e-38 Score=308.35 Aligned_cols=255 Identities=30% Similarity=0.487 Sum_probs=195.6
Q ss_pred ceeEeeeeccCCceEEEEEEEc---CCCCEEEEEEeccch--------hhHHHHHHHHHHc-CCCCccccceeeeeccCC
Q 011138 138 SYMAERVVGTGSFGVVFQAKCL---ETGDSVAIKKVLQDK--------RYKNRELQIMRLL-NHPNVVSLKHCFFSTTEK 205 (492)
Q Consensus 138 ~y~~~~~lG~G~fg~Vy~~~~~---~~g~~vAiK~~~~~~--------~~~~~E~~il~~l-~h~nIv~l~~~~~~~~~~ 205 (492)
+|.+.+.||+|+||.||++.+. .+++.||||.+.... ....+|+.+++.+ +||||+++++++ .
T Consensus 1 ~~~~~~~ig~G~~~~vy~~~~~~~~~~~~~~avk~~~~~~~~~~~~~~~~~~~E~~~l~~~~~~~~i~~~~~~~-----~ 75 (288)
T cd05583 1 NFELLRVLGTGAYGKVFLVRKVGGHDAGKLYAMKVLKKATIVQKAKTAEHTRTERQVLEAVRRCPFLVTLHYAF-----Q 75 (288)
T ss_pred CceEEEEeccCCCceEEEEEEeccccCCcEEEEEEEehHHHHhhhhHHHHHHHHHHHHHhccCCcchhhhheee-----e
Confidence 3888999999999999999864 467899999885421 2345799999999 599999999888 4
Q ss_pred CceEEEEEeeechhh-HHHHhhhhhhcCCCcCHHHHHHHHHHHHHHHHHHHhhCCcccCCCCCCceEEcCCCCcEEEeee
Q 011138 206 DELYLNLVLEYISET-VYRVSKHYTRMNQHVPILYVQLYTYQICRALNYLHHVVGVCHRDIKPQNLLVNPHTHQLKICDF 284 (492)
Q Consensus 206 ~~~~~~lV~E~~~~~-l~~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~yLH~~~givHrDlKp~NILl~~~~~~vkL~DF 284 (492)
....+|+||||+.++ +...+. ....+++..++.++.|++.||.|||+ .|++||||||.||+++.++ .++|+||
T Consensus 76 ~~~~~~lv~e~~~~~~L~~~~~----~~~~~~~~~~~~~~~ql~~~l~~lH~-~~~~H~dl~p~nil~~~~~-~~~l~df 149 (288)
T cd05583 76 TDTKLHLILDYVNGGELFTHLY----QREHFTESEVRVYIAEIVLALDHLHQ-LGIIYRDIKLENILLDSEG-HVVLTDF 149 (288)
T ss_pred cCCEEEEEEecCCCCcHHHHHh----hcCCcCHHHHHHHHHHHHHHHHHHHH-CCeeccCCCHHHeEECCCC-CEEEEEC
Confidence 445688999999865 333322 23568888999999999999999997 9999999999999999887 7999999
Q ss_pred cCccccCCCCC--CccceeccCccCchhhcCCC-CCCcchhhHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCCH
Q 011138 285 GSAKMLVPGEP--NISYICSRYYRAPELIFGAT-EYTTAIDMWSIGCVLAELLLGQPLFPGESGVDQLVEIIKILGTPTR 361 (492)
Q Consensus 285 G~a~~~~~~~~--~~~~~gt~~y~aPE~~~~~~-~~~~~~DvwSlGvil~ell~G~~pf~~~~~~~~~~~i~~~~g~p~~ 361 (492)
|++........ .....|+..|+|||.+.+.. ..+.++|+||||+++|+|++|..||...........+.+..-.
T Consensus 150 g~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~Dv~slG~il~el~tg~~p~~~~~~~~~~~~~~~~~~~--- 226 (288)
T cd05583 150 GLSKEFLAEEEERAYSFCGTIEYMAPEVIRGGSGGHDKAVDWWSLGVLTFELLTGASPFTVDGEQNSQSEISRRILK--- 226 (288)
T ss_pred ccccccccccccccccccCCccccCHHHhcCCCCCCcchhhhHHHHHHHHHHHhCCCCcccCcccchHHHHHHHHHc---
Confidence 99876543322 22346889999999985532 3678999999999999999999999654332222222211000
Q ss_pred HHHhhcCCCCcccCCCcccCCCcccccCCCCChhHhhhhccccccCCCCcCC---HHHhhCCCCCCCCCC
Q 011138 362 EEIKCMNPNYTEFKFPQIKAHPWHKIFHKRMPPEALDLVSRLLQYSPSLRCT---ALEACAHPFFDDLRD 428 (492)
Q Consensus 362 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~Li~~~L~~dP~~R~t---~~e~l~Hp~f~~~~~ 428 (492)
... ..+..++.++.+||.+||+.||++||| +.++|+||||+.+..
T Consensus 227 ----------~~~------------~~~~~~~~~l~~li~~~l~~~p~~R~t~~~~~~~l~~~~~~~~~~ 274 (288)
T cd05583 227 ----------SKP------------PFPKTMSAEARDFIQKLLEKDPKKRLGANGADEIKNHPFFQGIDW 274 (288)
T ss_pred ----------cCC------------CCCcccCHHHHHHHHHHhcCCHhhccCcchHHHHhcCcccccCCH
Confidence 000 012346789999999999999999998 567899999998754
No 319
>cd05094 PTKc_TrkC Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase C. Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase C (TrkC); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkC is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkC to its ligand, neurotrophin 3 (NT3), results in receptor oligomerization and activation of the catalytic domain. TrkC is broadly expressed in the nervous system and in some n
Probab=100.00 E-value=4.6e-38 Score=309.20 Aligned_cols=247 Identities=23% Similarity=0.337 Sum_probs=192.2
Q ss_pred cceeEeeeeccCCceEEEEEEEc-----CCCCEEEEEEeccch----hhHHHHHHHHHHcCCCCccccceeeeeccCCCc
Q 011138 137 ISYMAERVVGTGSFGVVFQAKCL-----ETGDSVAIKKVLQDK----RYKNRELQIMRLLNHPNVVSLKHCFFSTTEKDE 207 (492)
Q Consensus 137 ~~y~~~~~lG~G~fg~Vy~~~~~-----~~g~~vAiK~~~~~~----~~~~~E~~il~~l~h~nIv~l~~~~~~~~~~~~ 207 (492)
.+|.+.+.||+|+||.||+|++. .++..+++|.+.... ....+|+.+++.++|+||+++++++ .+.
T Consensus 5 ~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~-----~~~ 79 (291)
T cd05094 5 RDIVLKRELGEGAFGKVFLAECYNLSPTKDKMLVAVKALKDPTLAARKDFQREAELLTNLQHEHIVKFYGVC-----GDG 79 (291)
T ss_pred HHeEEeeeecccCCCeEEEeEeeccCCCCcceeeEEEecCCccHHHHHHHHHHHHHHhcCCCCCcceEEEEE-----ccC
Confidence 45899999999999999999864 345679999875432 3456899999999999999999988 344
Q ss_pred eEEEEEeeechhh-HHHHhhhhh------------hcCCCcCHHHHHHHHHHHHHHHHHHHhhCCcccCCCCCCceEEcC
Q 011138 208 LYLNLVLEYISET-VYRVSKHYT------------RMNQHVPILYVQLYTYQICRALNYLHHVVGVCHRDIKPQNLLVNP 274 (492)
Q Consensus 208 ~~~~lV~E~~~~~-l~~~~~~~~------------~~~~~~~~~~~~~i~~qi~~aL~yLH~~~givHrDlKp~NILl~~ 274 (492)
...++||||++++ +.+.+.... .....+++..++.++.||+.||.|||+ +||+||||||+|||++.
T Consensus 80 ~~~~lv~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~i~~al~~lH~-~~i~H~dlkp~Nil~~~ 158 (291)
T cd05094 80 DPLIMVFEYMKHGDLNKFLRAHGPDAMILVDGQPRQAKGELGLSQMLHIASQIASGMVYLAS-QHFVHRDLATRNCLVGA 158 (291)
T ss_pred CceEEEEecCCCCcHHHHHHhcCcccccccccccccCcCCCCHHHHHHHHHHHHHHHHHHHh-CCeeecccCcceEEEcc
Confidence 4588999999754 444443211 112457889999999999999999997 99999999999999998
Q ss_pred CCCcEEEeeecCccccCCCC---CCccceeccCccCchhhcCCCCCCcchhhHHHHHHHHHHHh-CCCCCCCCChHHHHH
Q 011138 275 HTHQLKICDFGSAKMLVPGE---PNISYICSRYYRAPELIFGATEYTTAIDMWSIGCVLAELLL-GQPLFPGESGVDQLV 350 (492)
Q Consensus 275 ~~~~vkL~DFG~a~~~~~~~---~~~~~~gt~~y~aPE~~~~~~~~~~~~DvwSlGvil~ell~-G~~pf~~~~~~~~~~ 350 (492)
++ .+||+|||++....... ......++..|+|||.+.+. .++.++|||||||++|+|++ |..||...+..+.+.
T Consensus 159 ~~-~~~l~dfg~a~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~-~~~~~~Di~slG~il~el~t~g~~p~~~~~~~~~~~ 236 (291)
T cd05094 159 NL-LVKIGDFGMSRDVYSTDYYRVGGHTMLPIRWMPPESIMYR-KFTTESDVWSFGVILWEIFTYGKQPWFQLSNTEVIE 236 (291)
T ss_pred CC-cEEECCCCcccccCCCceeecCCCCCcceeecChHHhccC-CCCchhhHHHHHHHHHHHHhCCCCCCCCCCHHHHHH
Confidence 87 89999999997653322 12234567889999998654 48899999999999999998 999998776654433
Q ss_pred HHHHHhCCCCHHHHhhcCCCCcccCCCcccCCCcccccCCCCChhHhhhhccccccCCCCcCCHHHhhC
Q 011138 351 EIIKILGTPTREEIKCMNPNYTEFKFPQIKAHPWHKIFHKRMPPEALDLVSRLLQYSPSLRCTALEACA 419 (492)
Q Consensus 351 ~i~~~~g~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~Li~~~L~~dP~~R~t~~e~l~ 419 (492)
.+... ..+. .+...+.++.+|+.+||+.||.+||++.++++
T Consensus 237 ~~~~~-------------------~~~~---------~~~~~~~~~~~li~~~l~~~P~~Rpt~~~v~~ 277 (291)
T cd05094 237 CITQG-------------------RVLE---------RPRVCPKEVYDIMLGCWQREPQQRLNIKEIYK 277 (291)
T ss_pred HHhCC-------------------CCCC---------CCccCCHHHHHHHHHHcccChhhCcCHHHHHH
Confidence 32110 0000 11246789999999999999999999999875
No 320
>cd05098 PTKc_FGFR1 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 1. Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 1 (FGFR1); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR1 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to
Probab=100.00 E-value=4.7e-38 Score=311.60 Aligned_cols=248 Identities=23% Similarity=0.334 Sum_probs=189.8
Q ss_pred ccceeEeeeeccCCceEEEEEEEcC-------CCCEEEEEEeccch-----hhHHHHHHHHHHc-CCCCccccceeeeec
Q 011138 136 TISYMAERVVGTGSFGVVFQAKCLE-------TGDSVAIKKVLQDK-----RYKNRELQIMRLL-NHPNVVSLKHCFFST 202 (492)
Q Consensus 136 ~~~y~~~~~lG~G~fg~Vy~~~~~~-------~g~~vAiK~~~~~~-----~~~~~E~~il~~l-~h~nIv~l~~~~~~~ 202 (492)
..+|.+++.||+|+||.||+|.+.. ++..+|+|.+..+. ....+|+.+++.+ +||||+++++++
T Consensus 17 ~~~~~i~~~lg~G~~g~V~~~~~~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~e~~~l~~l~~h~~i~~~~~~~--- 93 (307)
T cd05098 17 RDRLVLGKPLGEGCFGQVVMAEAIGLDKEKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKNIINLLGAC--- 93 (307)
T ss_pred hHHeEEeeeeccCCCeeEEEeEEeccCCcccCccceEEEEeccCCCChHHHHHHHHHHHHHHHhcCCCCEeeEEEEE---
Confidence 4579999999999999999998643 33579999886432 2344699999999 799999999988
Q ss_pred cCCCceEEEEEeeechh-hHHHHhhhhhh------------cCCCcCHHHHHHHHHHHHHHHHHHHhhCCcccCCCCCCc
Q 011138 203 TEKDELYLNLVLEYISE-TVYRVSKHYTR------------MNQHVPILYVQLYTYQICRALNYLHHVVGVCHRDIKPQN 269 (492)
Q Consensus 203 ~~~~~~~~~lV~E~~~~-~l~~~~~~~~~------------~~~~~~~~~~~~i~~qi~~aL~yLH~~~givHrDlKp~N 269 (492)
.+....|+||||+++ ++.+.+..... ....+++..+..++.||+.||+|||+ +|++||||||+|
T Consensus 94 --~~~~~~~lv~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~lH~-~gi~H~dlkp~N 170 (307)
T cd05098 94 --TQDGPLYVIVEYASKGNLREYLRARRPPGMEYCYNPTQVPEEQLSFKDLVSCAYQVARGMEYLAS-KKCIHRDLAARN 170 (307)
T ss_pred --ecCCceEEEEecCCCCcHHHHHHhcCCcccccccccccCccccCCHHHHHHHHHHHHHHHHHHHH-CCcccccccHHh
Confidence 334468899999985 55555433211 12357888899999999999999997 999999999999
Q ss_pred eEEcCCCCcEEEeeecCccccCCCCC---CccceeccCccCchhhcCCCCCCcchhhHHHHHHHHHHHh-CCCCCCCCCh
Q 011138 270 LLVNPHTHQLKICDFGSAKMLVPGEP---NISYICSRYYRAPELIFGATEYTTAIDMWSIGCVLAELLL-GQPLFPGESG 345 (492)
Q Consensus 270 ILl~~~~~~vkL~DFG~a~~~~~~~~---~~~~~gt~~y~aPE~~~~~~~~~~~~DvwSlGvil~ell~-G~~pf~~~~~ 345 (492)
||++.++ .+||+|||+++....... .....+++.|+|||++.+. .++.++|||||||++|+|++ |..||.+...
T Consensus 171 ill~~~~-~~kL~dfg~a~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~-~~~~~~DvwslG~~l~el~~~g~~p~~~~~~ 248 (307)
T cd05098 171 VLVTEDN-VMKIADFGLARDIHHIDYYKKTTNGRLPVKWMAPEALFDR-IYTHQSDVWSFGVLLWEIFTLGGSPYPGVPV 248 (307)
T ss_pred eEEcCCC-cEEECCCcccccccccchhhccccCCCccceeChHHhccC-CCCcHHHHHHHHHHHHHHHcCCCCCCCcCCH
Confidence 9999887 799999999876532211 1122345689999998654 48999999999999999998 8999977654
Q ss_pred HHHHHHHHHHhCCCCHHHHhhcCCCCcccCCCcccCCCcccccCCCCChhHhhhhccccccCCCCcCCHHHhhC
Q 011138 346 VDQLVEIIKILGTPTREEIKCMNPNYTEFKFPQIKAHPWHKIFHKRMPPEALDLVSRLLQYSPSLRCTALEACA 419 (492)
Q Consensus 346 ~~~~~~i~~~~g~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~Li~~~L~~dP~~R~t~~e~l~ 419 (492)
.+....+ ... ... ..+..++.++++||.+||..+|.+||++.++++
T Consensus 249 ~~~~~~~-~~~---------------~~~------------~~~~~~~~~~~~li~~~l~~~p~~Rps~~evl~ 294 (307)
T cd05098 249 EELFKLL-KEG---------------HRM------------DKPSNCTNELYMMMRDCWHAVPSQRPTFKQLVE 294 (307)
T ss_pred HHHHHHH-HcC---------------CCC------------CCCCcCCHHHHHHHHHHcccChhhCcCHHHHHH
Confidence 3333222 210 000 012356889999999999999999999999986
No 321
>cd05103 PTKc_VEGFR2 Catalytic domain of the Protein Tyrosine Kinase, Vascular Endothelial Growth Factor Receptor 2. Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor 2 (VEGFR2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR2 (or Flk1) is a member of the VEGFR subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of VEGFRs to their ligands, the VEGFs, leads to receptor dimerization, activation, and intracellular signaling. The carboxyl terminus of VEGFR2 plays an important role in its autophosp
Probab=100.00 E-value=3.7e-38 Score=317.38 Aligned_cols=250 Identities=25% Similarity=0.357 Sum_probs=188.5
Q ss_pred cceeEeeeeccCCceEEEEEEE-----cCCCCEEEEEEeccch-----hhHHHHHHHHHHc-CCCCccccceeeeeccCC
Q 011138 137 ISYMAERVVGTGSFGVVFQAKC-----LETGDSVAIKKVLQDK-----RYKNRELQIMRLL-NHPNVVSLKHCFFSTTEK 205 (492)
Q Consensus 137 ~~y~~~~~lG~G~fg~Vy~~~~-----~~~g~~vAiK~~~~~~-----~~~~~E~~il~~l-~h~nIv~l~~~~~~~~~~ 205 (492)
.+|.+.+.||+|+||.||+|.+ ..+++.||||++.... ....+|+.++..+ +||||+++++++...
T Consensus 7 ~~~~~~~~lG~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~~~~~~~~~--- 83 (343)
T cd05103 7 DRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNLLGACTKP--- 83 (343)
T ss_pred hHhcccccccCCccceEEEEeeccCCccccceeEEEEEeccCCChHHHHHHHHHHHHHHhccCCccHhhhcceeecC---
Confidence 4699999999999999999985 3467899999985422 2345799999999 689999999977432
Q ss_pred CceEEEEEeeechhh-HHHHhhhhhh------------------------------------------------------
Q 011138 206 DELYLNLVLEYISET-VYRVSKHYTR------------------------------------------------------ 230 (492)
Q Consensus 206 ~~~~~~lV~E~~~~~-l~~~~~~~~~------------------------------------------------------ 230 (492)
...+++||||++++ +.+.+.....
T Consensus 84 -~~~~~lv~ey~~~g~L~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 162 (343)
T cd05103 84 -GGPLMVIVEFCKFGNLSNYLRSKRGEFVPYKTKDARFRQGKSGYGDISEDLKRRLDSITSSQSSASSGFVEEKSLSDVE 162 (343)
T ss_pred -CCceEEEEeccCCCcHHHHHHhcCCccccccccccccccccccccchhhhhhhhccccccccccccccccCCCccccch
Confidence 23578999999864 4333322100
Q ss_pred ---------cCCCcCHHHHHHHHHHHHHHHHHHHhhCCcccCCCCCCceEEcCCCCcEEEeeecCccccCCCCC---Ccc
Q 011138 231 ---------MNQHVPILYVQLYTYQICRALNYLHHVVGVCHRDIKPQNLLVNPHTHQLKICDFGSAKMLVPGEP---NIS 298 (492)
Q Consensus 231 ---------~~~~~~~~~~~~i~~qi~~aL~yLH~~~givHrDlKp~NILl~~~~~~vkL~DFG~a~~~~~~~~---~~~ 298 (492)
....+++..+..++.||+.||.|||+ +||+||||||+|||++.++ .+||+|||++........ ...
T Consensus 163 ~~~~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~-~~i~H~dikp~Nil~~~~~-~~kl~dfg~~~~~~~~~~~~~~~~ 240 (343)
T cd05103 163 EEEAEQEDLYKKVLTLEDLICYSFQVAKGMEFLAS-RKCIHRDLAARNILLSENN-VVKICDFGLARDIYKDPDYVRKGD 240 (343)
T ss_pred hhhhhhhhhhhccCCHHHHHHHHHHHHHHHHHHHh-CCeecCCCccCeEEEcCCC-cEEEEecccccccccCcchhhcCC
Confidence 01236777888999999999999997 9999999999999999877 899999999976532221 112
Q ss_pred ceeccCccCchhhcCCCCCCcchhhHHHHHHHHHHHh-CCCCCCCCChHHHHHHHHHHhCCCCHHHHhhcCCCCcccCCC
Q 011138 299 YICSRYYRAPELIFGATEYTTAIDMWSIGCVLAELLL-GQPLFPGESGVDQLVEIIKILGTPTREEIKCMNPNYTEFKFP 377 (492)
Q Consensus 299 ~~gt~~y~aPE~~~~~~~~~~~~DvwSlGvil~ell~-G~~pf~~~~~~~~~~~i~~~~g~p~~~~~~~~~~~~~~~~~~ 377 (492)
..++..|+|||++.+. .++.++|||||||++|+|++ |..||........+...+... ....
T Consensus 241 ~~~~~~y~aPE~~~~~-~~~~~~Di~slG~~l~el~~~g~~p~~~~~~~~~~~~~~~~~---------------~~~~-- 302 (343)
T cd05103 241 ARLPLKWMAPETIFDR-VYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEFCRRLKEG---------------TRMR-- 302 (343)
T ss_pred CCCCcceECcHHhcCC-CCCchhhHHHHHHHHHHHHHCCCCCCCCccccHHHHHHHhcc---------------CCCC--
Confidence 3446779999998654 48999999999999999996 999998765433333222110 0000
Q ss_pred cccCCCcccccCCCCChhHhhhhccccccCCCCcCCHHHhhCC
Q 011138 378 QIKAHPWHKIFHKRMPPEALDLVSRLLQYSPSLRCTALEACAH 420 (492)
Q Consensus 378 ~~~~~~~~~~~~~~~s~~~~~Li~~~L~~dP~~R~t~~e~l~H 420 (492)
.+..+++++.+++.+||+.||.+|||+.++++|
T Consensus 303 ----------~~~~~~~~~~~~~~~cl~~~p~~Rps~~eil~~ 335 (343)
T cd05103 303 ----------APDYTTPEMYQTMLDCWHGEPSQRPTFSELVEH 335 (343)
T ss_pred ----------CCCCCCHHHHHHHHHHccCChhhCcCHHHHHHH
Confidence 112357889999999999999999999999976
No 322
>cd05080 PTKc_Tyk2_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinase, Tyrosine kinase 2. Protein Tyrosine Kinase (PTK) family; Tyrosine kinase 2 (Tyk2); catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyk2 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase catalytic domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of sign
Probab=100.00 E-value=4.7e-38 Score=307.68 Aligned_cols=257 Identities=26% Similarity=0.340 Sum_probs=187.5
Q ss_pred eeEeeeeccCCceEEEEEE----EcCCCCEEEEEEeccc-----hhhHHHHHHHHHHcCCCCccccceeeeeccCCCceE
Q 011138 139 YMAERVVGTGSFGVVFQAK----CLETGDSVAIKKVLQD-----KRYKNRELQIMRLLNHPNVVSLKHCFFSTTEKDELY 209 (492)
Q Consensus 139 y~~~~~lG~G~fg~Vy~~~----~~~~g~~vAiK~~~~~-----~~~~~~E~~il~~l~h~nIv~l~~~~~~~~~~~~~~ 209 (492)
|.+.+.||+|+||+||++. ...++..||+|.+... .....+|+++++.++||||+++++++.. .+..+
T Consensus 6 ~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~---~~~~~ 82 (283)
T cd05080 6 LKKIRVLGEGHFGKVSLYCYDPANDGTGEMVAVKTLKRECGQQNTSGWKKEINILKTLYHENIVKYKGCCSE---QGGKG 82 (283)
T ss_pred ceeceecccCCCcEEEEeeEccccCCCCceEEEEEeccccChHHHHHHHHHHHHHHhCCCCCEeeEEEEEec---CCCce
Confidence 3888999999999998865 3457889999988643 2334579999999999999999987743 22346
Q ss_pred EEEEeeechhhHHHHhhhhhhcCCCcCHHHHHHHHHHHHHHHHHHHhhCCcccCCCCCCceEEcCCCCcEEEeeecCccc
Q 011138 210 LNLVLEYISETVYRVSKHYTRMNQHVPILYVQLYTYQICRALNYLHHVVGVCHRDIKPQNLLVNPHTHQLKICDFGSAKM 289 (492)
Q Consensus 210 ~~lV~E~~~~~l~~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~yLH~~~givHrDlKp~NILl~~~~~~vkL~DFG~a~~ 289 (492)
+++||||+.++.+..... ...+++..+..++.||+.||.|||+ +||+||||||+|||++.++ .+||+|||+++.
T Consensus 83 ~~lv~e~~~~~~l~~~~~----~~~l~~~~~~~i~~~l~~~l~~lH~-~~i~H~dlkp~Nili~~~~-~~~l~dfg~~~~ 156 (283)
T cd05080 83 LQLIMEYVPLGSLRDYLP----KHKLNLAQLLLFAQQICEGMAYLHS-QHYIHRDLAARNVLLDNDR-LVKIGDFGLAKA 156 (283)
T ss_pred EEEEecCCCCCCHHHHHH----HcCCCHHHHHHHHHHHHHHHHHHHH-CCeeccccChheEEEcCCC-cEEEeecccccc
Confidence 889999998754432221 2358999999999999999999997 9999999999999999887 799999999986
Q ss_pred cCCCCC----CccceeccCccCchhhcCCCCCCcchhhHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHH-hCCCCHHHH
Q 011138 290 LVPGEP----NISYICSRYYRAPELIFGATEYTTAIDMWSIGCVLAELLLGQPLFPGESGVDQLVEIIKI-LGTPTREEI 364 (492)
Q Consensus 290 ~~~~~~----~~~~~gt~~y~aPE~~~~~~~~~~~~DvwSlGvil~ell~G~~pf~~~~~~~~~~~i~~~-~g~p~~~~~ 364 (492)
...+.. .....++..|+|||.+.+. .++.++|||||||++|+|++|..||...... +..+... .+......+
T Consensus 157 ~~~~~~~~~~~~~~~~~~~~~~PE~~~~~-~~~~~~Di~slG~~l~el~tg~~p~~~~~~~--~~~~~~~~~~~~~~~~~ 233 (283)
T cd05080 157 VPEGHEYYRVREDGDSPVFWYAVECLKEN-KFSYASDVWSFGVTLYELLTHCDSKQSPPKK--FEEMIGPKQGQMTVVRL 233 (283)
T ss_pred cCCcchhhccCCCCCCCceeeCHhHhccc-CCCcccccHHHHHHHHHHHhCCCCCCCCcch--hhhhhcccccccchhhh
Confidence 643322 1123456779999998654 4899999999999999999999998654321 1111110 000000000
Q ss_pred hhcCCCCcccCCCcccCCCcccccCCCCChhHhhhhccccccCCCCcCCHHHhhC
Q 011138 365 KCMNPNYTEFKFPQIKAHPWHKIFHKRMPPEALDLVSRLLQYSPSLRCTALEACA 419 (492)
Q Consensus 365 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~Li~~~L~~dP~~R~t~~e~l~ 419 (492)
. ...........+..++.++.+|+.+||+.||++|||+.++++
T Consensus 234 ~------------~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rps~~~i~~ 276 (283)
T cd05080 234 I------------ELLERGMRLPCPKNCPQEVYILMKNCWETEAKFRPTFRSLIP 276 (283)
T ss_pred h------------hhhhcCCCCCCCCCCCHHHHHHHHHHhccChhhCCCHHHHHH
Confidence 0 000000001123457889999999999999999999999985
No 323
>cd05051 PTKc_DDR Catalytic domain of the Protein Tyrosine Kinases, Discoidin Domain Receptors. Protein Tyrosine Kinase (PTK) family; Discoidin Domain Receptor (DDR) subfamily; catalytic (c) domain. The DDR subfamily consists of homologs of mammalian DDR1, DDR2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR subfamily members are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDRs regulate cell adhesion, proliferation, and extracellular matrix remodeling. They have been linke
Probab=100.00 E-value=5e-38 Score=309.32 Aligned_cols=254 Identities=19% Similarity=0.243 Sum_probs=192.7
Q ss_pred cceeEeeeeccCCceEEEEEEEcCCC----------------CEEEEEEeccch-----hhHHHHHHHHHHcCCCCcccc
Q 011138 137 ISYMAERVVGTGSFGVVFQAKCLETG----------------DSVAIKKVLQDK-----RYKNRELQIMRLLNHPNVVSL 195 (492)
Q Consensus 137 ~~y~~~~~lG~G~fg~Vy~~~~~~~g----------------~~vAiK~~~~~~-----~~~~~E~~il~~l~h~nIv~l 195 (492)
.+|.+.+.||+|+||.||+|.+..++ ..||+|.+.... ....+|+++++.++||||+++
T Consensus 5 ~~~~~~~~lg~G~~g~v~~~~~~~~~~~~~~~~~~~~~~~~~~~va~K~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~ 84 (296)
T cd05051 5 QPLNFVEKLGEGQFGEVHLCEADGLQDFSEKAFAENDNADAPVLVAVKVLRPDASDNAREDFLKEVKILSRLSDPNIARL 84 (296)
T ss_pred hhCcccccccCCCCccEEEEEeccCCcccccccccccccCCceeEEEEEecCccCHHHHHHHHHHHHHHHhcCCCCEeEE
Confidence 46999999999999999999876544 458999886432 334579999999999999999
Q ss_pred ceeeeeccCCCceEEEEEeeechhh-HHHHhhhhhh-------cCCCcCHHHHHHHHHHHHHHHHHHHhhCCcccCCCCC
Q 011138 196 KHCFFSTTEKDELYLNLVLEYISET-VYRVSKHYTR-------MNQHVPILYVQLYTYQICRALNYLHHVVGVCHRDIKP 267 (492)
Q Consensus 196 ~~~~~~~~~~~~~~~~lV~E~~~~~-l~~~~~~~~~-------~~~~~~~~~~~~i~~qi~~aL~yLH~~~givHrDlKp 267 (492)
++++. +..+.++||||+.++ +...+..... ....+++..+..++.||+.||.|||+ +||+||||||
T Consensus 85 ~~~~~-----~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~al~~LH~-~~i~H~dlkp 158 (296)
T cd05051 85 LGVCT-----VDPPLCMIMEYMENGDLNQFLQKHVAETSGLACNSKSLSFSTLLYMATQIASGMRYLES-LNFVHRDLAT 158 (296)
T ss_pred EEEEe-----cCCCcEEEEecCCCCCHHHHHHhcccccccccccCCCCCHHHHHHHHHHHHHHHHHHHH-cCccccccch
Confidence 99883 334688999999854 4444332211 12368899999999999999999997 9999999999
Q ss_pred CceEEcCCCCcEEEeeecCccccCCCC---CCccceeccCccCchhhcCCCCCCcchhhHHHHHHHHHHHh--CCCCCCC
Q 011138 268 QNLLVNPHTHQLKICDFGSAKMLVPGE---PNISYICSRYYRAPELIFGATEYTTAIDMWSIGCVLAELLL--GQPLFPG 342 (492)
Q Consensus 268 ~NILl~~~~~~vkL~DFG~a~~~~~~~---~~~~~~gt~~y~aPE~~~~~~~~~~~~DvwSlGvil~ell~--G~~pf~~ 342 (492)
+||+++.++ .++|+|||+++...... ......+++.|+|||.+.+. .++.++|||||||++|+|++ |..||..
T Consensus 159 ~Nili~~~~-~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~-~~~~~~Dv~slG~~l~el~~~~~~~p~~~ 236 (296)
T cd05051 159 RNCLVGKNY-TIKIADFGMSRNLYSSDYYRVQGRAPLPIRWMAWESVLLG-KFTTKSDVWAFGVTLWEILTLCREQPYEH 236 (296)
T ss_pred hceeecCCC-ceEEccccceeecccCcceeecCcCCCCceecCHHHhhcC-CCCccchhhhhHHHHHHHHhcCCCCCCCC
Confidence 999999887 89999999987653322 12234567789999998654 48999999999999999998 7788877
Q ss_pred CChHHHHHHHHHHhCCCCHHHHhhcCCCCcccCCCcccCCCcccccCCCCChhHhhhhccccccCCCCcCCHHHhhC
Q 011138 343 ESGVDQLVEIIKILGTPTREEIKCMNPNYTEFKFPQIKAHPWHKIFHKRMPPEALDLVSRLLQYSPSLRCTALEACA 419 (492)
Q Consensus 343 ~~~~~~~~~i~~~~g~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~Li~~~L~~dP~~R~t~~e~l~ 419 (492)
.+..+.+..+........ ..... ..+..+++++.+||.+||+.||.+|||+.++++
T Consensus 237 ~~~~~~~~~~~~~~~~~~-----------~~~~~----------~~~~~~~~~l~~li~~cl~~~p~~Rpt~~el~~ 292 (296)
T cd05051 237 LTDQQVIENAGHFFRDDG-----------RQIYL----------PRPPNCPKDIYELMLECWRRDEEDRPTFREIHL 292 (296)
T ss_pred cChHHHHHHHHhcccccc-----------ccccC----------CCccCCCHHHHHHHHHHhccChhcCCCHHHHHH
Confidence 665555444433111000 00000 012346789999999999999999999999964
No 324
>cd05071 PTKc_Src Catalytic domain of the Protein Tyrosine Kinase, Src. Protein Tyrosine Kinase (PTK) family; Src kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Src (or c-Src) is a cytoplasmic (or non-receptor) tyr kinase, containing an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region with a conserved tyr. It is activated by autophosphorylation at the tyr kinase domain, and is negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). c-Src is the vertebrate homolog of the oncogenic protein (v-Src) from Rous sarcoma virus. Together with other Src subfamily proteins, it is invo
Probab=100.00 E-value=6e-38 Score=303.59 Aligned_cols=243 Identities=26% Similarity=0.360 Sum_probs=190.1
Q ss_pred cceeEeeeeccCCceEEEEEEEcCCCCEEEEEEeccch---hhHHHHHHHHHHcCCCCccccceeeeeccCCCceEEEEE
Q 011138 137 ISYMAERVVGTGSFGVVFQAKCLETGDSVAIKKVLQDK---RYKNRELQIMRLLNHPNVVSLKHCFFSTTEKDELYLNLV 213 (492)
Q Consensus 137 ~~y~~~~~lG~G~fg~Vy~~~~~~~g~~vAiK~~~~~~---~~~~~E~~il~~l~h~nIv~l~~~~~~~~~~~~~~~~lV 213 (492)
.+|.+.+.||+|+||.||+|.+..+ ..||+|++.... ....+|+.+++.++||||+++++++. . .+.++|
T Consensus 6 ~~~~~~~~lg~g~~~~v~~~~~~~~-~~valK~~~~~~~~~~~~~~E~~~l~~l~~~~i~~~~~~~~-----~-~~~~lv 78 (262)
T cd05071 6 ESLRLEVKLGQGCFGEVWMGTWNGT-TRVAIKTLKPGTMSPEAFLQEAQVMKKLRHEKLVQLYAVVS-----E-EPIYIV 78 (262)
T ss_pred HHeeEeeecCCCCCCcEEEEEecCC-ceEEEEecccCccCHHHHHHHHHHHHhCCCCCcceEEEEEC-----C-CCcEEE
Confidence 4699999999999999999988665 469999886432 34567999999999999999988752 1 236799
Q ss_pred eeechh-hHHHHhhhhhhcCCCcCHHHHHHHHHHHHHHHHHHHhhCCcccCCCCCCceEEcCCCCcEEEeeecCccccCC
Q 011138 214 LEYISE-TVYRVSKHYTRMNQHVPILYVQLYTYQICRALNYLHHVVGVCHRDIKPQNLLVNPHTHQLKICDFGSAKMLVP 292 (492)
Q Consensus 214 ~E~~~~-~l~~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~yLH~~~givHrDlKp~NILl~~~~~~vkL~DFG~a~~~~~ 292 (492)
|||+++ ++.+.+.. .....+++..+..++.|++.||.|||+ .||+||||||+||+++.++ .+||+|||.+.....
T Consensus 79 ~e~~~~~~L~~~~~~--~~~~~~~~~~~~~~~~~l~~aL~~lH~-~~i~H~dl~p~Nill~~~~-~~~L~dfg~~~~~~~ 154 (262)
T cd05071 79 TEYMSKGSLLDFLKG--EMGKYLRLPQLVDMAAQIASGMAYVER-MNYVHRDLRAANILVGENL-VCKVADFGLARLIED 154 (262)
T ss_pred EEcCCCCcHHHHHhh--ccccCCCHHHHHHHHHHHHHHHHHHHH-CCccccccCcccEEEcCCC-cEEeccCCceeeccc
Confidence 999986 44444432 123457888899999999999999997 9999999999999999887 799999999976543
Q ss_pred CCCC--ccceeccCccCchhhcCCCCCCcchhhHHHHHHHHHHHh-CCCCCCCCChHHHHHHHHHHhCCCCHHHHhhcCC
Q 011138 293 GEPN--ISYICSRYYRAPELIFGATEYTTAIDMWSIGCVLAELLL-GQPLFPGESGVDQLVEIIKILGTPTREEIKCMNP 369 (492)
Q Consensus 293 ~~~~--~~~~gt~~y~aPE~~~~~~~~~~~~DvwSlGvil~ell~-G~~pf~~~~~~~~~~~i~~~~g~p~~~~~~~~~~ 369 (492)
.... ....++..|+|||++.+. .++.++|||||||++|+|++ |..||.+....+....+....
T Consensus 155 ~~~~~~~~~~~~~~y~~PE~~~~~-~~~~~~DvwslG~~l~ellt~g~~p~~~~~~~~~~~~~~~~~------------- 220 (262)
T cd05071 155 NEYTARQGAKFPIKWTAPEAALYG-RFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVERGY------------- 220 (262)
T ss_pred cccccccCCcccceecCHhHhccC-CCCchhhHHHHHHHHHHHHcCCCCCCCCCChHHHHHHHhcCC-------------
Confidence 3221 123456789999988544 48999999999999999999 899998876655444332210
Q ss_pred CCcccCCCcccCCCcccccCCCCChhHhhhhccccccCCCCcCCHHHhhC
Q 011138 370 NYTEFKFPQIKAHPWHKIFHKRMPPEALDLVSRLLQYSPSLRCTALEACA 419 (492)
Q Consensus 370 ~~~~~~~~~~~~~~~~~~~~~~~s~~~~~Li~~~L~~dP~~R~t~~e~l~ 419 (492)
..+ ....++..+.+||.+||+.||++||++.++++
T Consensus 221 -----~~~----------~~~~~~~~l~~li~~~l~~~p~~Rp~~~~~~~ 255 (262)
T cd05071 221 -----RMP----------CPPECPESLHDLMCQCWRKEPEERPTFEYLQA 255 (262)
T ss_pred -----CCC----------CccccCHHHHHHHHHHccCCcccCCCHHHHHH
Confidence 000 11346889999999999999999999999875
No 325
>cd05576 STKc_RPK118_like Catalytic domain of the Protein Serine/Threonine Kinases, RPK118 and similar proteins. Serine/Threonine Kinases (STKs), RPK118-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The RPK118-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily show similarity to human RPK118, which contains an N-terminal Phox homology (PX) domain, a Microtubule Interacting and Trafficking (MIT) domain, and a kinase domain containing a long insert. Also included in the family is human RPK60 (or ribosomal protein S6 kinase-like 1), which also contains MIT and kinase domains but lacks a PX domain. RPK118 binds sphingosine kinase, a key enzyme in the synthesis of sphingosine 1-phospha
Probab=100.00 E-value=1.1e-38 Score=304.29 Aligned_cols=228 Identities=26% Similarity=0.353 Sum_probs=180.6
Q ss_pred CCceEEEEEEEcCCCCEEEEEEeccchhhHHHHHHHHHHcCCCCccccceeeeeccCCCceEEEEEeeechhh-HHHHhh
Q 011138 148 GSFGVVFQAKCLETGDSVAIKKVLQDKRYKNRELQIMRLLNHPNVVSLKHCFFSTTEKDELYLNLVLEYISET-VYRVSK 226 (492)
Q Consensus 148 G~fg~Vy~~~~~~~g~~vAiK~~~~~~~~~~~E~~il~~l~h~nIv~l~~~~~~~~~~~~~~~~lV~E~~~~~-l~~~~~ 226 (492)
|.||.||++.+..+|+.||+|.+..... ..+|...+....||||+++++++ .+....++||||++++ +.+.+.
T Consensus 4 g~~~~v~~~~~~~~~~~~~~K~i~~~~~-~~~~~~~~~~~~~~~i~~~~~~~-----~~~~~~~lv~e~~~~~~L~~~l~ 77 (237)
T cd05576 4 GVIDKVLLVMDTRTQQTFILKGLRKSSE-YSRERLTIIPHCVPNMVCLHKYI-----VSEDSVFLVLQHAEGGKLWSHIS 77 (237)
T ss_pred cccceEEEEEEccCCcEEEEEeecchhh-hhhHHHHHHhcCCCceeehhhhe-----ecCCeEEEEEecCCCCCHHHHHH
Confidence 8999999999999999999999876543 33456666667799999999988 3445689999999864 444433
Q ss_pred hhhhcCCCcCHHHHHHHHHHHHHHHHHHHhhCCcccCCCCCCceEEcCCCCcEEEeeecCccccCCCCCCccceeccCcc
Q 011138 227 HYTRMNQHVPILYVQLYTYQICRALNYLHHVVGVCHRDIKPQNLLVNPHTHQLKICDFGSAKMLVPGEPNISYICSRYYR 306 (492)
Q Consensus 227 ~~~~~~~~~~~~~~~~i~~qi~~aL~yLH~~~givHrDlKp~NILl~~~~~~vkL~DFG~a~~~~~~~~~~~~~gt~~y~ 306 (492)
. ...+++..+..++.|++.||.|||+ +||+||||||+||+++.++ .++|+|||.+...... .....++..|+
T Consensus 78 ~----~~~l~~~~~~~~~~ql~~~l~~lH~-~~i~H~dlkp~Nil~~~~~-~~~l~df~~~~~~~~~--~~~~~~~~~y~ 149 (237)
T cd05576 78 K----FLNIPEECVKRWAAEMVVALDALHR-EGIVCRDLNPNNILLDDRG-HIQLTYFSRWSEVEDS--CDGEAVENMYC 149 (237)
T ss_pred H----hcCCCHHHHHHHHHHHHHHHHHHHh-CCeeccCCCHHHEEEcCCC-CEEEecccchhccccc--cccCCcCcccc
Confidence 2 2458899999999999999999997 9999999999999999887 7999999987655322 23345677899
Q ss_pred CchhhcCCCCCCcchhhHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCCHHHHhhcCCCCcccCCCcccCCCccc
Q 011138 307 APELIFGATEYTTAIDMWSIGCVLAELLLGQPLFPGESGVDQLVEIIKILGTPTREEIKCMNPNYTEFKFPQIKAHPWHK 386 (492)
Q Consensus 307 aPE~~~~~~~~~~~~DvwSlGvil~ell~G~~pf~~~~~~~~~~~i~~~~g~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 386 (492)
|||.+.+. .++.++|+||+||++|+|++|..||...... + . ....+.
T Consensus 150 aPE~~~~~-~~~~~~DvwslG~il~el~~g~~~~~~~~~~-----~------------~----~~~~~~----------- 196 (237)
T cd05576 150 APEVGGIS-EETEACDWWSLGAILFELLTGKTLVECHPSG-----I------------N----THTTLN----------- 196 (237)
T ss_pred CCcccCCC-CCCchhhHHHHHHHHHHHHHCcchhhcCchh-----c------------c----cccccC-----------
Confidence 99988544 4789999999999999999999887542210 0 0 000111
Q ss_pred ccCCCCChhHhhhhccccccCCCCcCCH-----HHhhCCCCC
Q 011138 387 IFHKRMPPEALDLVSRLLQYSPSLRCTA-----LEACAHPFF 423 (492)
Q Consensus 387 ~~~~~~s~~~~~Li~~~L~~dP~~R~t~-----~e~l~Hp~f 423 (492)
++..+++.+++||.+||+.||++|+++ .++++||||
T Consensus 197 -~~~~~~~~~~~li~~~l~~dp~~R~~~~~~~~~~~~~h~~~ 237 (237)
T cd05576 197 -IPEWVSEEARSLLQQLLQFNPTERLGAGVAGVEDIKSHPFF 237 (237)
T ss_pred -CcccCCHHHHHHHHHHccCCHHHhcCCCccchHHHHcCCCC
Confidence 223478899999999999999999986 999999998
No 326
>cd05053 PTKc_FGFR Catalytic domain of the Protein Tyrosine Kinases, Fibroblast Growth Factor Receptors. Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor (FGFR) subfamily; catalytic (c) domain. The FGFR subfamily consists of FGFR1, FGFR2, FGFR3, FGFR4, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K).PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, and to heparin/heparan sulfate (HS) results in the formation of a ternary complex, which leads to receptor dimerization and activation,
Probab=100.00 E-value=4.4e-38 Score=309.36 Aligned_cols=249 Identities=23% Similarity=0.343 Sum_probs=192.3
Q ss_pred ccceeEeeeeccCCceEEEEEEEcCC-----CCEEEEEEeccch-----hhHHHHHHHHHHc-CCCCccccceeeeeccC
Q 011138 136 TISYMAERVVGTGSFGVVFQAKCLET-----GDSVAIKKVLQDK-----RYKNRELQIMRLL-NHPNVVSLKHCFFSTTE 204 (492)
Q Consensus 136 ~~~y~~~~~lG~G~fg~Vy~~~~~~~-----g~~vAiK~~~~~~-----~~~~~E~~il~~l-~h~nIv~l~~~~~~~~~ 204 (492)
..+|.+.+.||+|+||.||++.+... ...+|+|.+.... ....+|+.+++.+ +|+||+++++++
T Consensus 11 ~~~~~~~~~ig~g~~g~v~~~~~~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~E~~~l~~l~~h~~i~~~~~~~----- 85 (293)
T cd05053 11 RDRLTLGKPLGEGAFGQVVKAEAVGLDNPNETSTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIINLLGVC----- 85 (293)
T ss_pred HhHeEEeeEecccccccEEEEEEecCCCCCCceeEEEEEccCCCCHHHHHHHHHHHHHHHhhcCCCCeeeEEEEE-----
Confidence 34699999999999999999987644 3789999885432 2345799999999 799999999988
Q ss_pred CCceEEEEEeeechhh-HHHHhhhhh------------hcCCCcCHHHHHHHHHHHHHHHHHHHhhCCcccCCCCCCceE
Q 011138 205 KDELYLNLVLEYISET-VYRVSKHYT------------RMNQHVPILYVQLYTYQICRALNYLHHVVGVCHRDIKPQNLL 271 (492)
Q Consensus 205 ~~~~~~~lV~E~~~~~-l~~~~~~~~------------~~~~~~~~~~~~~i~~qi~~aL~yLH~~~givHrDlKp~NIL 271 (492)
.....+++||||+.++ +...+.... .....+++..+..++.||+.||.|||+ +||+||||||+|||
T Consensus 86 ~~~~~~~li~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~al~~LH~-~~ivH~dlkp~Nil 164 (293)
T cd05053 86 TQEGPLYVVVEYAAHGNLRDFLRARRPPGEYASPDDPRPPEETLTQKDLVSFAYQVARGMEFLAS-KKCIHRDLAARNVL 164 (293)
T ss_pred cCCCCeEEEEEeCCCCcHHHHHHhcCCCccccccccccccccccCHHHHHHHHHHHHHHHHHHHH-CCccccccceeeEE
Confidence 3344589999999864 444433211 234568889999999999999999997 99999999999999
Q ss_pred EcCCCCcEEEeeecCccccCCCCC---CccceeccCccCchhhcCCCCCCcchhhHHHHHHHHHHHh-CCCCCCCCChHH
Q 011138 272 VNPHTHQLKICDFGSAKMLVPGEP---NISYICSRYYRAPELIFGATEYTTAIDMWSIGCVLAELLL-GQPLFPGESGVD 347 (492)
Q Consensus 272 l~~~~~~vkL~DFG~a~~~~~~~~---~~~~~gt~~y~aPE~~~~~~~~~~~~DvwSlGvil~ell~-G~~pf~~~~~~~ 347 (492)
++.++ .+||+|||+++....... .....++..|+|||++.+. .++.++|||||||++|+|++ |..||.+....+
T Consensus 165 ~~~~~-~~kL~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~-~~~~~~Di~slG~il~el~~~g~~p~~~~~~~~ 242 (293)
T cd05053 165 VTEDH-VMKIADFGLARDIHHIDYYRKTTNGRLPVKWMAPEALFDR-VYTHQSDVWSFGVLLWEIFTLGGSPYPGIPVEE 242 (293)
T ss_pred EcCCC-eEEeCccccccccccccceeccCCCCCCccccCHHHhccC-CcCcccceeehhhHHHHHhcCCCCCCCCCCHHH
Confidence 99877 899999999986543221 1122345679999998554 58999999999999999997 999998776554
Q ss_pred HHHHHHHHhCCCCHHHHhhcCCCCcccCCCcccCCCcccccCCCCChhHhhhhccccccCCCCcCCHHHhhCC
Q 011138 348 QLVEIIKILGTPTREEIKCMNPNYTEFKFPQIKAHPWHKIFHKRMPPEALDLVSRLLQYSPSLRCTALEACAH 420 (492)
Q Consensus 348 ~~~~i~~~~g~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~Li~~~L~~dP~~R~t~~e~l~H 420 (492)
....+... .... .+...+.++.+|+.+||..||++|||+.+++++
T Consensus 243 ~~~~~~~~----------------~~~~------------~~~~~~~~~~~li~~~l~~~p~~Rps~~eil~~ 287 (293)
T cd05053 243 LFKLLKEG----------------YRME------------KPQNCTQELYHLMRDCWHEVPSQRPTFKQLVED 287 (293)
T ss_pred HHHHHHcC----------------CcCC------------CCCCCCHHHHHHHHHHcccCcccCcCHHHHHHH
Confidence 44332210 0000 112467899999999999999999999999864
No 327
>cd05116 PTKc_Syk Catalytic domain of the Protein Tyrosine Kinase, Spleen tyrosine kinase. Protein Tyrosine Kinase (PTK) family; Spleen tyrosine kinase (Syk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Syk, together with Zap-70, form the Syk subfamily of kinases which are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. Syk was first cloned from the spleen, and its function in hematopoietic cells is well-established. Syk is involved in the signaling downstream of activated receptors (including B-cell and Fc receptors) that contain ITAMs (immunoreceptor tyr activation motifs), leading to processes such as cell proliferatio
Probab=100.00 E-value=6.2e-38 Score=302.43 Aligned_cols=235 Identities=25% Similarity=0.348 Sum_probs=183.4
Q ss_pred eeccCCceEEEEEEE--cCCCCEEEEEEeccch------hhHHHHHHHHHHcCCCCccccceeeeeccCCCceEEEEEee
Q 011138 144 VVGTGSFGVVFQAKC--LETGDSVAIKKVLQDK------RYKNRELQIMRLLNHPNVVSLKHCFFSTTEKDELYLNLVLE 215 (492)
Q Consensus 144 ~lG~G~fg~Vy~~~~--~~~g~~vAiK~~~~~~------~~~~~E~~il~~l~h~nIv~l~~~~~~~~~~~~~~~~lV~E 215 (492)
.||+|+||.||+|.+ ..++..+|+|++.... ....+|+.+++.++||||+++++++ .+. ..++|||
T Consensus 2 ~lg~G~~g~v~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~-----~~~-~~~lv~e 75 (257)
T cd05116 2 ELGSGNFGTVKKGMYKMKKSEKTVAVKILKNDNNDPALKDELLREANVMQQLDNPYIVRMIGIC-----EAE-SWMLVME 75 (257)
T ss_pred cCCCcCCcceEEeEEecCCCceEEEEEEccCCCCcHHHHHHHHHHHHHHHhCCCCCcceEEEEE-----cCC-CcEEEEe
Confidence 589999999999964 5678899999875332 2345789999999999999999876 222 3579999
Q ss_pred echhh-HHHHhhhhhhcCCCcCHHHHHHHHHHHHHHHHHHHhhCCcccCCCCCCceEEcCCCCcEEEeeecCccccCCCC
Q 011138 216 YISET-VYRVSKHYTRMNQHVPILYVQLYTYQICRALNYLHHVVGVCHRDIKPQNLLVNPHTHQLKICDFGSAKMLVPGE 294 (492)
Q Consensus 216 ~~~~~-l~~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~yLH~~~givHrDlKp~NILl~~~~~~vkL~DFG~a~~~~~~~ 294 (492)
|++++ +.+.+. ....+++..+..++.||+.||.|||+ +||+||||||.|||++.++ .+||+|||++.......
T Consensus 76 ~~~~~~L~~~l~----~~~~~~~~~~~~i~~qi~~al~~lH~-~~i~H~dlkp~nill~~~~-~~kl~Dfg~~~~~~~~~ 149 (257)
T cd05116 76 LAELGPLNKFLQ----KNKHVTEKNITELVHQVSMGMKYLEE-TNFVHRDLAARNVLLVTQH-YAKISDFGLSKALGADE 149 (257)
T ss_pred cCCCCcHHHHHH----hcCCCCHHHHHHHHHHHHHHHHHHHH-CCEeecccchhhEEEcCCC-eEEECCCccccccCCCC
Confidence 99965 444332 23468899999999999999999997 9999999999999999877 79999999997654332
Q ss_pred C----CccceeccCccCchhhcCCCCCCcchhhHHHHHHHHHHHh-CCCCCCCCChHHHHHHHHHHhCCCCHHHHhhcCC
Q 011138 295 P----NISYICSRYYRAPELIFGATEYTTAIDMWSIGCVLAELLL-GQPLFPGESGVDQLVEIIKILGTPTREEIKCMNP 369 (492)
Q Consensus 295 ~----~~~~~gt~~y~aPE~~~~~~~~~~~~DvwSlGvil~ell~-G~~pf~~~~~~~~~~~i~~~~g~p~~~~~~~~~~ 369 (492)
. .....++..|+|||.+.. ..++.++|+|||||++|||++ |..||.+.+..+....+.+.
T Consensus 150 ~~~~~~~~~~~~~~y~aPE~~~~-~~~~~~~Di~slG~~l~el~t~g~~p~~~~~~~~~~~~i~~~-------------- 214 (257)
T cd05116 150 NYYKAKTHGKWPVKWYAPECMNY-YKFSSKSDVWSFGVLMWEAFSYGQKPYKGMKGNEVTQMIESG-------------- 214 (257)
T ss_pred CeeeecCCCCCCccccCHhHhcc-CCcCchhHHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHCC--------------
Confidence 2 112234578999998854 458899999999999999997 99999887665544433220
Q ss_pred CCcccCCCcccCCCcccccCCCCChhHhhhhccccccCCCCcCCHHHhhC
Q 011138 370 NYTEFKFPQIKAHPWHKIFHKRMPPEALDLVSRLLQYSPSLRCTALEACA 419 (492)
Q Consensus 370 ~~~~~~~~~~~~~~~~~~~~~~~s~~~~~Li~~~L~~dP~~R~t~~e~l~ 419 (492)
.... .+..+++++.+||.+||+.||++||++++|..
T Consensus 215 --~~~~------------~~~~~~~~l~~li~~~~~~~p~~Rp~~~~i~~ 250 (257)
T cd05116 215 --ERME------------CPQRCPPEMYDLMKLCWTYGVDERPGFAVVEL 250 (257)
T ss_pred --CCCC------------CCCCCCHHHHHHHHHHhccCchhCcCHHHHHH
Confidence 0000 12357899999999999999999999998853
No 328
>cd05082 PTKc_Csk Catalytic domain of the Protein Tyrosine Kinase, C-terminal Src kinase. Protein Tyrosine Kinase (PTK) family; C-terminal Src kinase (Csk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. To inhibit Src kinases, Csk is translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Csk catalyzes the tyr phosphorylation of the regulatory C-terminal tail of Src kinases, re
Probab=100.00 E-value=7.6e-38 Score=301.54 Aligned_cols=242 Identities=23% Similarity=0.342 Sum_probs=190.2
Q ss_pred cceeEeeeeccCCceEEEEEEEcCCCCEEEEEEeccch--hhHHHHHHHHHHcCCCCccccceeeeeccCCCceEEEEEe
Q 011138 137 ISYMAERVVGTGSFGVVFQAKCLETGDSVAIKKVLQDK--RYKNRELQIMRLLNHPNVVSLKHCFFSTTEKDELYLNLVL 214 (492)
Q Consensus 137 ~~y~~~~~lG~G~fg~Vy~~~~~~~g~~vAiK~~~~~~--~~~~~E~~il~~l~h~nIv~l~~~~~~~~~~~~~~~~lV~ 214 (492)
.+|.+.+.||+|+||.||++.. .|..||+|.+..+. ....+|+.+++.++|+||++++++++.. ....++||
T Consensus 6 ~~~~~~~~lg~g~~~~v~~~~~--~~~~~~~k~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~----~~~~~lv~ 79 (256)
T cd05082 6 KELKLLQTIGKGEFGDVMLGDY--RGNKVAVKCIKNDATAQAFLAEASVMTQLRHSNLVQLLGVIVEE----KGGLYIVT 79 (256)
T ss_pred HhCeeeeeecccCCCeEEEEEE--cCCcEEEEEeCCCchHHHHHHHHHHHHhCCCCCeeeEEEEEEcC----CCceEEEE
Confidence 4699999999999999999976 48889999886543 2355799999999999999999876432 23478999
Q ss_pred eechh-hHHHHhhhhhhcCCCcCHHHHHHHHHHHHHHHHHHHhhCCcccCCCCCCceEEcCCCCcEEEeeecCccccCCC
Q 011138 215 EYISE-TVYRVSKHYTRMNQHVPILYVQLYTYQICRALNYLHHVVGVCHRDIKPQNLLVNPHTHQLKICDFGSAKMLVPG 293 (492)
Q Consensus 215 E~~~~-~l~~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~yLH~~~givHrDlKp~NILl~~~~~~vkL~DFG~a~~~~~~ 293 (492)
||+++ .+.+.+.. .....+++..+..++.||+.||.|||+ +||+||||||+||+++.++ .+||+|||++......
T Consensus 80 e~~~~~~L~~~~~~--~~~~~~~~~~~~~~~~~i~~~l~~lH~-~~i~H~dlkp~nil~~~~~-~~kl~dfg~~~~~~~~ 155 (256)
T cd05082 80 EYMAKGSLVDYLRS--RGRSVLGGDCLLKFSLDVCEAMEYLEA-NNFVHRDLAARNVLVSEDN-VAKVSDFGLTKEASST 155 (256)
T ss_pred ECCCCCcHHHHHHh--cCCCCCCHHHHHHHHHHHHHHHHHHHh-CCEeccccchheEEEcCCC-cEEecCCccceecccc
Confidence 99986 55554332 122347888899999999999999997 9999999999999999887 7999999998754322
Q ss_pred CCCccceeccCccCchhhcCCCCCCcchhhHHHHHHHHHHHh-CCCCCCCCChHHHHHHHHHHhCCCCHHHHhhcCCCCc
Q 011138 294 EPNISYICSRYYRAPELIFGATEYTTAIDMWSIGCVLAELLL-GQPLFPGESGVDQLVEIIKILGTPTREEIKCMNPNYT 372 (492)
Q Consensus 294 ~~~~~~~gt~~y~aPE~~~~~~~~~~~~DvwSlGvil~ell~-G~~pf~~~~~~~~~~~i~~~~g~p~~~~~~~~~~~~~ 372 (492)
. ....++..|+|||++.+. .++.++|||||||++|+|++ |+.||...+..+....+.+.
T Consensus 156 ~--~~~~~~~~y~aPE~~~~~-~~~~~~Dv~slG~i~~~l~~~g~~p~~~~~~~~~~~~~~~~----------------- 215 (256)
T cd05082 156 Q--DTGKLPVKWTAPEALREK-KFSTKSDVWSFGILLWEIYSFGRVPYPRIPLKDVVPRVEKG----------------- 215 (256)
T ss_pred C--CCCccceeecCHHHHccC-CCCchhhhHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHhcC-----------------
Confidence 2 233456789999998654 48999999999999999997 99999876554433333210
Q ss_pred ccCCCcccCCCcccccCCCCChhHhhhhccccccCCCCcCCHHHhhC
Q 011138 373 EFKFPQIKAHPWHKIFHKRMPPEALDLVSRLLQYSPSLRCTALEACA 419 (492)
Q Consensus 373 ~~~~~~~~~~~~~~~~~~~~s~~~~~Li~~~L~~dP~~R~t~~e~l~ 419 (492)
. .......+++.+.+||.+||..||++|||+.++++
T Consensus 216 -~----------~~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~l~~ 251 (256)
T cd05082 216 -Y----------KMDAPDGCPPVVYDVMKQCWHLDAATRPSFLQLRE 251 (256)
T ss_pred -C----------CCCCCCCCCHHHHHHHHHHhcCChhhCcCHHHHHH
Confidence 0 00112357899999999999999999999999975
No 329
>cd05109 PTKc_HER2 Catalytic domain of the Protein Tyrosine Kinase, HER2. Protein Tyrosine Kinase (PTK) family; HER2 (ErbB2, HER2/neu); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER2 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr residues in the C-terminal tail, which serve
Probab=100.00 E-value=5e-38 Score=306.84 Aligned_cols=243 Identities=21% Similarity=0.318 Sum_probs=188.2
Q ss_pred cceeEeeeeccCCceEEEEEEEcCCCC----EEEEEEeccc-----hhhHHHHHHHHHHcCCCCccccceeeeeccCCCc
Q 011138 137 ISYMAERVVGTGSFGVVFQAKCLETGD----SVAIKKVLQD-----KRYKNRELQIMRLLNHPNVVSLKHCFFSTTEKDE 207 (492)
Q Consensus 137 ~~y~~~~~lG~G~fg~Vy~~~~~~~g~----~vAiK~~~~~-----~~~~~~E~~il~~l~h~nIv~l~~~~~~~~~~~~ 207 (492)
.+|.+.+.||+|+||+||+|.+..+|. .||+|.+... .....+|+.+++.++||||+++++++...
T Consensus 7 ~~~~~~~~lg~G~~g~vy~~~~~~~~~~~~~~va~K~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~----- 81 (279)
T cd05109 7 TELKKVKVLGSGAFGTVYKGIWIPDGENVKIPVAIKVLRENTSPKANKEILDEAYVMAGVGSPYVCRLLGICLTS----- 81 (279)
T ss_pred hheeeeeecCCCCCceEEEEEEecCCCccceEEEEEEecCCCCHHHHHHHHHHHHHHHhcCCCCCceEEEEEcCC-----
Confidence 468999999999999999999887776 4899987532 22345789999999999999999887421
Q ss_pred eEEEEEeeechhh-HHHHhhhhhhcCCCcCHHHHHHHHHHHHHHHHHHHhhCCcccCCCCCCceEEcCCCCcEEEeeecC
Q 011138 208 LYLNLVLEYISET-VYRVSKHYTRMNQHVPILYVQLYTYQICRALNYLHHVVGVCHRDIKPQNLLVNPHTHQLKICDFGS 286 (492)
Q Consensus 208 ~~~~lV~E~~~~~-l~~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~yLH~~~givHrDlKp~NILl~~~~~~vkL~DFG~ 286 (492)
..+++|||++++ +.+.+. .....+++..+..++.||+.||.|||+ +||+||||||+|||++.++ .+||+|||+
T Consensus 82 -~~~l~~~~~~~g~l~~~l~---~~~~~~~~~~~~~~~~qi~~~L~~lH~-~~iiH~dlkp~Nil~~~~~-~~kL~dfG~ 155 (279)
T cd05109 82 -TVQLVTQLMPYGCLLDYVR---ENKDRIGSQDLLNWCVQIAKGMSYLEE-VRLVHRDLAARNVLVKSPN-HVKITDFGL 155 (279)
T ss_pred -CcEEEEEcCCCCCHHHHHh---hccCCCCHHHHHHHHHHHHHHHHHHHH-CCeeccccccceEEEcCCC-cEEECCCCc
Confidence 256899999854 444332 223468899999999999999999997 9999999999999998777 799999999
Q ss_pred ccccCCCCCC---ccceeccCccCchhhcCCCCCCcchhhHHHHHHHHHHHh-CCCCCCCCChHHHHHHHHHHhCCCCHH
Q 011138 287 AKMLVPGEPN---ISYICSRYYRAPELIFGATEYTTAIDMWSIGCVLAELLL-GQPLFPGESGVDQLVEIIKILGTPTRE 362 (492)
Q Consensus 287 a~~~~~~~~~---~~~~gt~~y~aPE~~~~~~~~~~~~DvwSlGvil~ell~-G~~pf~~~~~~~~~~~i~~~~g~p~~~ 362 (492)
++........ ....+++.|+|||.+.+. .++.++|||||||++|||++ |..||........ ..++.....+
T Consensus 156 ~~~~~~~~~~~~~~~~~~~~~y~~PE~~~~~-~~~~~~Di~slG~~l~el~t~g~~p~~~~~~~~~-~~~~~~~~~~--- 230 (279)
T cd05109 156 ARLLDIDETEYHADGGKVPIKWMALESILHR-RFTHQSDVWSYGVTVWELMTFGAKPYDGIPAREI-PDLLEKGERL--- 230 (279)
T ss_pred eeecccccceeecCCCccchhhCCHHHhccC-CCCchhHHHHHHHHHHHHHcCCCCCCCCCCHHHH-HHHHHCCCcC---
Confidence 9866432221 122346789999998654 48999999999999999998 9999977654332 2222211000
Q ss_pred HHhhcCCCCcccCCCcccCCCcccccCCCCChhHhhhhccccccCCCCcCCHHHhhC
Q 011138 363 EIKCMNPNYTEFKFPQIKAHPWHKIFHKRMPPEALDLVSRLLQYSPSLRCTALEACA 419 (492)
Q Consensus 363 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~Li~~~L~~dP~~R~t~~e~l~ 419 (492)
+ .+...+.++.++|.+||..||++||++.+++.
T Consensus 231 --------------~----------~~~~~~~~~~~li~~~l~~dp~~Rp~~~~l~~ 263 (279)
T cd05109 231 --------------P----------QPPICTIDVYMIMVKCWMIDSECRPRFRELVD 263 (279)
T ss_pred --------------C----------CCccCCHHHHHHHHHHcCCChhhCcCHHHHHH
Confidence 0 11246789999999999999999999999984
No 330
>cd05045 PTKc_RET Catalytic domain of the Protein Tyrosine Kinase, REarranged during Transfection protein. Protein Tyrosine Kinase (PTK) family; RET (REarranged during Transfection) protein; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. RET is a receptor tyr kinase (RTK) containing an extracellular region with four cadherin-like repeats, a calcium-binding site, and a cysteine-rich domain, a transmembrane segment, and an intracellular catalytic domain. It is part of a multisubunit complex that binds glial-derived neurotropic factor (GDNF) family ligands (GFLs) including GDNF, neurturin, artemin, and persephin. GFLs bind RET along with four GPI-anchored coreceptors, bringing two RET molecules together, leadi
Probab=100.00 E-value=5.3e-38 Score=308.51 Aligned_cols=246 Identities=23% Similarity=0.380 Sum_probs=187.6
Q ss_pred ceeEeeeeccCCceEEEEEEEcC-----CCCEEEEEEeccch-----hhHHHHHHHHHHcCCCCccccceeeeeccCCCc
Q 011138 138 SYMAERVVGTGSFGVVFQAKCLE-----TGDSVAIKKVLQDK-----RYKNRELQIMRLLNHPNVVSLKHCFFSTTEKDE 207 (492)
Q Consensus 138 ~y~~~~~lG~G~fg~Vy~~~~~~-----~g~~vAiK~~~~~~-----~~~~~E~~il~~l~h~nIv~l~~~~~~~~~~~~ 207 (492)
+|++.+.||+|+||.||+|.+.. ....+|+|.+.... ....+|+.+++.++||||+++++++ ...
T Consensus 1 ~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~-----~~~ 75 (290)
T cd05045 1 NLVLGKTLGEGEFGKVVKATAFRLKGRAGYTTVAVKMLKENASSSELRDLLSEFNLLKQVNHPHVIKLYGAC-----SQD 75 (290)
T ss_pred CccccccccCcCCcceEEEEEecCCCCCcceeEEEEecCCCCCHHHHHHHHHHHHHHhhCCCCCEeeEEEEE-----ecC
Confidence 37888999999999999998753 23578898875432 2345799999999999999999987 334
Q ss_pred eEEEEEeeechhh-HHHHhhhhh--------------------hcCCCcCHHHHHHHHHHHHHHHHHHHhhCCcccCCCC
Q 011138 208 LYLNLVLEYISET-VYRVSKHYT--------------------RMNQHVPILYVQLYTYQICRALNYLHHVVGVCHRDIK 266 (492)
Q Consensus 208 ~~~~lV~E~~~~~-l~~~~~~~~--------------------~~~~~~~~~~~~~i~~qi~~aL~yLH~~~givHrDlK 266 (492)
...++||||+.++ +...+.... .....+++..+..++.||+.||.|||+ +||+|||||
T Consensus 76 ~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~-~~ivH~dik 154 (290)
T cd05045 76 GPLLLIVEYAKYGSLRSFLRESRKVGPSYLGSDGNRNSSYLDNPDERALTMGDLISFAWQISRGMQYLAE-MKLVHRDLA 154 (290)
T ss_pred CCcEEEEEecCCCCHHHHHHhcCCccccccccccccccccccCccccccCHHHHHHHHHHHHHHHHHHHH-CCeehhhhh
Confidence 4578999999854 433332211 112457888899999999999999997 999999999
Q ss_pred CCceEEcCCCCcEEEeeecCccccCCCCC---CccceeccCccCchhhcCCCCCCcchhhHHHHHHHHHHHh-CCCCCCC
Q 011138 267 PQNLLVNPHTHQLKICDFGSAKMLVPGEP---NISYICSRYYRAPELIFGATEYTTAIDMWSIGCVLAELLL-GQPLFPG 342 (492)
Q Consensus 267 p~NILl~~~~~~vkL~DFG~a~~~~~~~~---~~~~~gt~~y~aPE~~~~~~~~~~~~DvwSlGvil~ell~-G~~pf~~ 342 (492)
|+|||++.++ .+||+|||+++....... .....++..|+|||.+.+. .++.++|||||||++|+|++ |..||.+
T Consensus 155 p~nill~~~~-~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~y~apE~~~~~-~~~~~~Di~slG~~l~el~t~g~~p~~~ 232 (290)
T cd05045 155 ARNVLVAEGR-KMKISDFGLSRDVYEEDSYVKRSKGRIPVKWMAIESLFDH-IYTTQSDVWSFGVLLWEIVTLGGNPYPG 232 (290)
T ss_pred hheEEEcCCC-cEEeccccccccccCccchhcccCCCCCccccCHHHHccC-CcchHhHHHHHHHHHHHHHhcCCCCCCC
Confidence 9999999877 899999999976533221 1223456789999998654 48999999999999999998 9999987
Q ss_pred CChHHHHHHHHHHhCCCCHHHHhhcCCCCcccCCCcccCCCcccccCCCCChhHhhhhccccccCCCCcCCHHHhhC
Q 011138 343 ESGVDQLVEIIKILGTPTREEIKCMNPNYTEFKFPQIKAHPWHKIFHKRMPPEALDLVSRLLQYSPSLRCTALEACA 419 (492)
Q Consensus 343 ~~~~~~~~~i~~~~g~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~Li~~~L~~dP~~R~t~~e~l~ 419 (492)
....+... .... .+.. ..+..++.++.+|+.+||+.||.+||++.+++.
T Consensus 233 ~~~~~~~~-~~~~-----------------~~~~----------~~~~~~~~~~~~~i~~cl~~~P~~Rp~~~~i~~ 281 (290)
T cd05045 233 IAPERLFN-LLKT-----------------GYRM----------ERPENCSEEMYNLMLTCWKQEPDKRPTFADISK 281 (290)
T ss_pred CCHHHHHH-HHhC-----------------CCCC----------CCCCCCCHHHHHHHHHHccCCcccCCCHHHHHH
Confidence 66443322 2210 0000 012357889999999999999999999999875
No 331
>cd05066 PTKc_EphR_A Catalytic domain of the Protein Tyrosine Kinases, Class EphA Ephrin Receptors. Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; most class EphA receptors including EphA3, EphA4, EphA5, and EphA7, but excluding EphA1, EphA2 and EphA10; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. One exception is EphA4, which also binds ephrins-B2/B3. EphRs contain an ephrin-binding domain and two fibronectin repeats extracellul
Probab=100.00 E-value=4.6e-38 Score=305.11 Aligned_cols=244 Identities=25% Similarity=0.361 Sum_probs=190.5
Q ss_pred cceeEeeeeccCCceEEEEEEEcCCCC---EEEEEEeccc-----hhhHHHHHHHHHHcCCCCccccceeeeeccCCCce
Q 011138 137 ISYMAERVVGTGSFGVVFQAKCLETGD---SVAIKKVLQD-----KRYKNRELQIMRLLNHPNVVSLKHCFFSTTEKDEL 208 (492)
Q Consensus 137 ~~y~~~~~lG~G~fg~Vy~~~~~~~g~---~vAiK~~~~~-----~~~~~~E~~il~~l~h~nIv~l~~~~~~~~~~~~~ 208 (492)
.+|.+.+.||+|+||.||+|.+..++. .+|+|.+... .....+|+.+++.++||||+++++++ ....
T Consensus 4 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~-----~~~~ 78 (267)
T cd05066 4 SCIKIEKVIGAGEFGEVCSGRLKLPGKREIPVAIKTLKAGYTEKQRRDFLSEASIMGQFDHPNIIHLEGVV-----TKSK 78 (267)
T ss_pred HHeEeeeeecccCCCceEEEEEecCCCCceEEEEEECCCCCCHHHHHHHHHHHHHHHhCCCCCcceEEEEE-----ecCC
Confidence 469999999999999999999875544 7999987542 23456799999999999999999988 3344
Q ss_pred EEEEEeeechhh-HHHHhhhhhhcCCCcCHHHHHHHHHHHHHHHHHHHhhCCcccCCCCCCceEEcCCCCcEEEeeecCc
Q 011138 209 YLNLVLEYISET-VYRVSKHYTRMNQHVPILYVQLYTYQICRALNYLHHVVGVCHRDIKPQNLLVNPHTHQLKICDFGSA 287 (492)
Q Consensus 209 ~~~lV~E~~~~~-l~~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~yLH~~~givHrDlKp~NILl~~~~~~vkL~DFG~a 287 (492)
+.|+||||++++ +.+.+. .....+++..+..++.||+.||.|||+ +||+||||||+|||++.++ .++|+|||++
T Consensus 79 ~~~lv~e~~~~~~L~~~~~---~~~~~~~~~~~~~i~~~i~~~l~~lH~-~~i~h~dlkp~nili~~~~-~~~l~dfg~~ 153 (267)
T cd05066 79 PVMIVTEYMENGSLDAFLR---KHDGQFTVIQLVGMLRGIASGMKYLSD-MGYVHRDLAARNILVNSNL-VCKVSDFGLS 153 (267)
T ss_pred ccEEEEEcCCCCCHHHHHH---hcCCCCCHHHHHHHHHHHHHHHHHHHH-CCEeehhhchhcEEECCCC-eEEeCCCCcc
Confidence 688999999865 433332 223467888999999999999999997 9999999999999999887 7999999999
Q ss_pred cccCCCCCC----ccceeccCccCchhhcCCCCCCcchhhHHHHHHHHHHHh-CCCCCCCCChHHHHHHHHHHhCCCCHH
Q 011138 288 KMLVPGEPN----ISYICSRYYRAPELIFGATEYTTAIDMWSIGCVLAELLL-GQPLFPGESGVDQLVEIIKILGTPTRE 362 (492)
Q Consensus 288 ~~~~~~~~~----~~~~gt~~y~aPE~~~~~~~~~~~~DvwSlGvil~ell~-G~~pf~~~~~~~~~~~i~~~~g~p~~~ 362 (492)
......... ....++..|+|||.+.+. .++.++|+|||||++|++++ |..||...+..+....+.+.
T Consensus 154 ~~~~~~~~~~~~~~~~~~~~~y~~pe~~~~~-~~~~~~Dv~slG~~l~ell~~g~~p~~~~~~~~~~~~~~~~------- 225 (267)
T cd05066 154 RVLEDDPEAAYTTRGGKIPIRWTAPEAIAYR-KFTSASDVWSYGIVMWEVMSYGERPYWEMSNQDVIKAIEEG------- 225 (267)
T ss_pred cccccccceeeecCCCccceeecCHhHhccC-ccCchhhhHHHHHHHHHHhcCCCCCcccCCHHHHHHHHhCC-------
Confidence 765432211 112235679999999654 48999999999999999886 99999887665544443221
Q ss_pred HHhhcCCCCcccCCCcccCCCcccccCCCCChhHhhhhccccccCCCCcCCHHHhhC
Q 011138 363 EIKCMNPNYTEFKFPQIKAHPWHKIFHKRMPPEALDLVSRLLQYSPSLRCTALEACA 419 (492)
Q Consensus 363 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~Li~~~L~~dP~~R~t~~e~l~ 419 (492)
...+ ....+++.+.+++.+||+.+|.+||++.++++
T Consensus 226 -----------~~~~----------~~~~~~~~~~~li~~~l~~~p~~Rp~~~~i~~ 261 (267)
T cd05066 226 -----------YRLP----------APMDCPAALHQLMLDCWQKDRNERPKFEQIVS 261 (267)
T ss_pred -----------CcCC----------CCCCCCHHHHHHHHHHcccCchhCCCHHHHHH
Confidence 0111 11246889999999999999999999999874
No 332
>cd05097 PTKc_DDR_like Catalytic domain of Discoidin Domain Receptor-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Discoidin Domain Receptor (DDR)-like proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR-like proteins are members of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDRs regulate cell adhesion, proliferation, and extracellular matrix remodeling. They have been linked to a variety of human cancers including
Probab=100.00 E-value=5.9e-38 Score=309.00 Aligned_cols=254 Identities=22% Similarity=0.271 Sum_probs=190.0
Q ss_pred cceeEeeeeccCCceEEEEEEEcCCC--------------CEEEEEEeccch-----hhHHHHHHHHHHcCCCCccccce
Q 011138 137 ISYMAERVVGTGSFGVVFQAKCLETG--------------DSVAIKKVLQDK-----RYKNRELQIMRLLNHPNVVSLKH 197 (492)
Q Consensus 137 ~~y~~~~~lG~G~fg~Vy~~~~~~~g--------------~~vAiK~~~~~~-----~~~~~E~~il~~l~h~nIv~l~~ 197 (492)
.+|++.+.||+|+||.||+|.+..++ ..||+|.+.... ....+|+++++.++|+||+++++
T Consensus 5 ~~~~~~~~lg~G~~g~v~~~~~~~~~~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~ei~~l~~l~h~~i~~~~~ 84 (295)
T cd05097 5 QQLRLKEKLGEGQFGEVHLCEAEGLAEFLGEGAPEFDGQPVLVAVKMLRADVTKTARNDFLKEIKIMSRLKNPNIIRLLG 84 (295)
T ss_pred HhCeehhccCCCCCceEEecccccchhhccccCcccCCCceEEEEEecCCCCCHHHHHHHHHHHHHHHhCCCCCcCeEEE
Confidence 46999999999999999999875432 358999886431 23457999999999999999999
Q ss_pred eeeeccCCCceEEEEEeeechhh-HHHHhhhhh--------hcCCCcCHHHHHHHHHHHHHHHHHHHhhCCcccCCCCCC
Q 011138 198 CFFSTTEKDELYLNLVLEYISET-VYRVSKHYT--------RMNQHVPILYVQLYTYQICRALNYLHHVVGVCHRDIKPQ 268 (492)
Q Consensus 198 ~~~~~~~~~~~~~~lV~E~~~~~-l~~~~~~~~--------~~~~~~~~~~~~~i~~qi~~aL~yLH~~~givHrDlKp~ 268 (492)
++ ......++||||+.++ +.+.+.... .....+++..+..++.||+.||.|||+ +|++||||||+
T Consensus 85 ~~-----~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~i~~~i~~al~~lH~-~~i~H~dlkp~ 158 (295)
T cd05097 85 VC-----VSDDPLCMITEYMENGDLNQFLSQREIESTFTHANNIPSVSIANLLYMAVQIASGMKYLAS-LNFVHRDLATR 158 (295)
T ss_pred EE-----cCCCccEEEEecCCCCcHHHHHHhccccccccccccCCcccHHHHHHHHHHHHHHHHHHHh-cCeeccccChh
Confidence 88 3444588999999864 444332211 011236778889999999999999997 99999999999
Q ss_pred ceEEcCCCCcEEEeeecCccccCCCCC---CccceeccCccCchhhcCCCCCCcchhhHHHHHHHHHHHh--CCCCCCCC
Q 011138 269 NLLVNPHTHQLKICDFGSAKMLVPGEP---NISYICSRYYRAPELIFGATEYTTAIDMWSIGCVLAELLL--GQPLFPGE 343 (492)
Q Consensus 269 NILl~~~~~~vkL~DFG~a~~~~~~~~---~~~~~gt~~y~aPE~~~~~~~~~~~~DvwSlGvil~ell~--G~~pf~~~ 343 (492)
|||++.++ .+||+|||++........ .....++..|+|||++.+. .++.++|||||||++|+|++ |..||...
T Consensus 159 Nill~~~~-~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~-~~~~~~DvwSlG~~l~el~~~~~~~p~~~~ 236 (295)
T cd05097 159 NCLVGNHY-TIKIADFGMSRNLYSGDYYRIQGRAVLPIRWMAWESILLG-KFTTASDVWAFGVTLWEMFTLCKEQPYSLL 236 (295)
T ss_pred hEEEcCCC-cEEecccccccccccCcceeccCcCcCceeecChhhhccC-CcCchhhHHHHHHHHHHHHHcCCCCCCccc
Confidence 99999877 799999999976533321 1123446789999998654 48999999999999999988 67888877
Q ss_pred ChHHHHHHHHHHhCCCCHHHHhhcCCCCcccCCCcccCCCcccccCCCCChhHhhhhccccccCCCCcCCHHHhhC
Q 011138 344 SGVDQLVEIIKILGTPTREEIKCMNPNYTEFKFPQIKAHPWHKIFHKRMPPEALDLVSRLLQYSPSLRCTALEACA 419 (492)
Q Consensus 344 ~~~~~~~~i~~~~g~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~Li~~~L~~dP~~R~t~~e~l~ 419 (492)
+..+.+..+.+...... ...+. ..++.+++.+++||.+||+.||.+||+++++++
T Consensus 237 ~~~~~~~~~~~~~~~~~------------~~~~~---------~~~~~~~~~l~~li~~~l~~~p~~RPs~~~i~~ 291 (295)
T cd05097 237 SDEQVIENTGEFFRNQG------------RQIYL---------SQTPLCPSPVFKLMMRCWSRDIKDRPTFNKIHH 291 (295)
T ss_pred ChHHHHHHHHHhhhhcc------------ccccC---------CCCCCCCHHHHHHHHHHcCCCchhCcCHHHHHH
Confidence 66555444433110000 00000 012346889999999999999999999999864
No 333
>cd05063 PTKc_EphR_A2 Catalytic domain of the Protein Tyrosine Kinase, Ephrin Receptor A2. Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; EphA2 receptor; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephrin ligand to EphR requires cell-cell contact since both are anchored
Probab=100.00 E-value=6.9e-38 Score=303.81 Aligned_cols=245 Identities=22% Similarity=0.322 Sum_probs=191.1
Q ss_pred cceeEeeeeccCCceEEEEEEEcCCCC---EEEEEEeccc-----hhhHHHHHHHHHHcCCCCccccceeeeeccCCCce
Q 011138 137 ISYMAERVVGTGSFGVVFQAKCLETGD---SVAIKKVLQD-----KRYKNRELQIMRLLNHPNVVSLKHCFFSTTEKDEL 208 (492)
Q Consensus 137 ~~y~~~~~lG~G~fg~Vy~~~~~~~g~---~vAiK~~~~~-----~~~~~~E~~il~~l~h~nIv~l~~~~~~~~~~~~~ 208 (492)
.+|...+.||+|+||.||+|.+..++. .+|+|.+... .....+|+++++.++|+||+++++++ .+..
T Consensus 5 ~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~-----~~~~ 79 (268)
T cd05063 5 SHITKQKVIGAGEFGEVFRGILKMPGRKEVAVAIKTLKPGYTEKQRQDFLSEASIMGQFSHHNIIRLEGVV-----TKFK 79 (268)
T ss_pred HHceEeeEecCCCCccEEEEEEecCCCCceEEEEEeccccCCHHHHHHHHHHHHHHhcCCCCCeeEEEEEE-----ccCC
Confidence 358889999999999999999876665 7999987543 22345799999999999999999988 3444
Q ss_pred EEEEEeeechhhHHHHhhhhhhcCCCcCHHHHHHHHHHHHHHHHHHHhhCCcccCCCCCCceEEcCCCCcEEEeeecCcc
Q 011138 209 YLNLVLEYISETVYRVSKHYTRMNQHVPILYVQLYTYQICRALNYLHHVVGVCHRDIKPQNLLVNPHTHQLKICDFGSAK 288 (492)
Q Consensus 209 ~~~lV~E~~~~~l~~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~yLH~~~givHrDlKp~NILl~~~~~~vkL~DFG~a~ 288 (492)
+.++||||++++.+.... ......+++..+..++.|++.||.|||+ .||+||||||+||+++.++ .+||+|||++.
T Consensus 80 ~~~lv~e~~~~~~L~~~~--~~~~~~~~~~~~~~~~~~l~~al~~lH~-~~i~H~dlkp~Nili~~~~-~~kl~dfg~~~ 155 (268)
T cd05063 80 PAMIITEYMENGALDKYL--RDHDGEFSSYQLVGMLRGIAAGMKYLSD-MNYVHRDLAARNILVNSNL-ECKVSDFGLSR 155 (268)
T ss_pred CcEEEEEcCCCCCHHHHH--HhcCCCCCHHHHHHHHHHHHHHHHHHHH-CCeeccccchhhEEEcCCC-cEEECCCccce
Confidence 588999999976443322 2223568888999999999999999997 9999999999999999877 79999999987
Q ss_pred ccCCCCCCc----cceeccCccCchhhcCCCCCCcchhhHHHHHHHHHHHh-CCCCCCCCChHHHHHHHHHHhCCCCHHH
Q 011138 289 MLVPGEPNI----SYICSRYYRAPELIFGATEYTTAIDMWSIGCVLAELLL-GQPLFPGESGVDQLVEIIKILGTPTREE 363 (492)
Q Consensus 289 ~~~~~~~~~----~~~gt~~y~aPE~~~~~~~~~~~~DvwSlGvil~ell~-G~~pf~~~~~~~~~~~i~~~~g~p~~~~ 363 (492)
......... ....+..|+|||++.+. .++.++|||||||++|+|++ |..||...+..+....+....
T Consensus 156 ~~~~~~~~~~~~~~~~~~~~y~~PE~~~~~-~~~~~~Dv~slG~il~ell~~g~~p~~~~~~~~~~~~i~~~~------- 227 (268)
T cd05063 156 VLEDDPEGTYTTSGGKIPIRWTAPEAIAYR-KFTSASDVWSFGIVMWEVMSFGERPYWDMSNHEVMKAINDGF------- 227 (268)
T ss_pred ecccccccceeccCCCcCceecCHHHhhcC-CcChHhHHHHHHHHHHHHHhCCCCCCCcCCHHHHHHHHhcCC-------
Confidence 654322111 11224579999998654 48999999999999999997 999998877655444443210
Q ss_pred HhhcCCCCcccCCCcccCCCcccccCCCCChhHhhhhccccccCCCCcCCHHHhhC
Q 011138 364 IKCMNPNYTEFKFPQIKAHPWHKIFHKRMPPEALDLVSRLLQYSPSLRCTALEACA 419 (492)
Q Consensus 364 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~Li~~~L~~dP~~R~t~~e~l~ 419 (492)
..| ....++.++.+|+.+||+.||++||++.++++
T Consensus 228 -----------~~~----------~~~~~~~~~~~li~~c~~~~p~~Rp~~~~i~~ 262 (268)
T cd05063 228 -----------RLP----------APMDCPSAVYQLMLQCWQQDRARRPRFVDIVN 262 (268)
T ss_pred -----------CCC----------CCCCCCHHHHHHHHHHcCCCcccCcCHHHHHH
Confidence 001 01246788999999999999999999999975
No 334
>cd05092 PTKc_TrkA Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase A. Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase A (TrkA); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkA is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkA to its ligand, nerve growth factor (NGF), results in receptor oligomerization and activation of the catalytic domain. TrkA is expressed mainly in neural-crest-derived sensory
Probab=100.00 E-value=7.5e-38 Score=305.93 Aligned_cols=246 Identities=23% Similarity=0.356 Sum_probs=190.1
Q ss_pred ceeEeeeeccCCceEEEEEEEc-----CCCCEEEEEEeccc----hhhHHHHHHHHHHcCCCCccccceeeeeccCCCce
Q 011138 138 SYMAERVVGTGSFGVVFQAKCL-----ETGDSVAIKKVLQD----KRYKNRELQIMRLLNHPNVVSLKHCFFSTTEKDEL 208 (492)
Q Consensus 138 ~y~~~~~lG~G~fg~Vy~~~~~-----~~g~~vAiK~~~~~----~~~~~~E~~il~~l~h~nIv~l~~~~~~~~~~~~~ 208 (492)
+|...+.||+|+||.||++... .++..+|+|.+... .....+|+++++.++|+||+++++++ .+..
T Consensus 6 ~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~-----~~~~ 80 (280)
T cd05092 6 DIVLKWELGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEASESARQDFQREAELLTVLQHQHIVRFYGVC-----TEGR 80 (280)
T ss_pred hceeccccCCccCCeEEEeEEecCCCCCCceEEEEEecCcCCHHHHHHHHHHHHHHhcCCCCCCceEEEEE-----ecCC
Confidence 5788899999999999999753 35678999987542 23456799999999999999999887 3344
Q ss_pred EEEEEeeechhh-HHHHhhhhhh-----------cCCCcCHHHHHHHHHHHHHHHHHHHhhCCcccCCCCCCceEEcCCC
Q 011138 209 YLNLVLEYISET-VYRVSKHYTR-----------MNQHVPILYVQLYTYQICRALNYLHHVVGVCHRDIKPQNLLVNPHT 276 (492)
Q Consensus 209 ~~~lV~E~~~~~-l~~~~~~~~~-----------~~~~~~~~~~~~i~~qi~~aL~yLH~~~givHrDlKp~NILl~~~~ 276 (492)
..++||||+.++ +.+.+..... ....+++..+..++.||+.||.|||+ +||+||||||+|||++.++
T Consensus 81 ~~~lv~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~al~~LH~-~~i~H~dlkp~nil~~~~~ 159 (280)
T cd05092 81 PLLMVFEYMRHGDLNRFLRSHGPDAKILAGGEDVAPGQLTLGQMLAIASQIASGMVYLAS-LHFVHRDLATRNCLVGQGL 159 (280)
T ss_pred ceEEEEecCCCCCHHHHHHhcCcchhhhcccccCCccccCHHHHHHHHHHHHHHHHHHHH-CCeecccccHhhEEEcCCC
Confidence 588999999854 4444332110 11357888999999999999999997 9999999999999999877
Q ss_pred CcEEEeeecCccccCCCCC---CccceeccCccCchhhcCCCCCCcchhhHHHHHHHHHHHh-CCCCCCCCChHHHHHHH
Q 011138 277 HQLKICDFGSAKMLVPGEP---NISYICSRYYRAPELIFGATEYTTAIDMWSIGCVLAELLL-GQPLFPGESGVDQLVEI 352 (492)
Q Consensus 277 ~~vkL~DFG~a~~~~~~~~---~~~~~gt~~y~aPE~~~~~~~~~~~~DvwSlGvil~ell~-G~~pf~~~~~~~~~~~i 352 (492)
.+||+|||++........ .....+++.|+|||.+.+. .++.++|||||||++|+|++ |.+||......+.+..+
T Consensus 160 -~~kL~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~-~~~~~~Di~slG~il~el~~~g~~p~~~~~~~~~~~~~ 237 (280)
T cd05092 160 -VVKIGDFGMSRDIYSTDYYRVGGRTMLPIRWMPPESILYR-KFTTESDIWSFGVVLWEIFTYGKQPWYQLSNTEAIECI 237 (280)
T ss_pred -CEEECCCCceeEcCCCceeecCCCccccccccCHHHhccC-CcCchhhHHHHHHHHHHHHcCCCCCCccCCHHHHHHHH
Confidence 799999999875532221 1233457789999998655 48999999999999999998 99999876665544443
Q ss_pred HHHhCCCCHHHHhhcCCCCcccCCCcccCCCcccccCCCCChhHhhhhccccccCCCCcCCHHHhhC
Q 011138 353 IKILGTPTREEIKCMNPNYTEFKFPQIKAHPWHKIFHKRMPPEALDLVSRLLQYSPSLRCTALEACA 419 (492)
Q Consensus 353 ~~~~g~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~Li~~~L~~dP~~R~t~~e~l~ 419 (492)
... .+ .. .+..+++.+.+||.+||+.||.+||++.+++.
T Consensus 238 ~~~--~~--------------~~------------~~~~~~~~~~~li~~cl~~~P~~Rp~~~~l~~ 276 (280)
T cd05092 238 TQG--RE--------------LE------------RPRTCPPEVYAIMQGCWQREPQQRMVIKDIHS 276 (280)
T ss_pred HcC--cc--------------CC------------CCCCCCHHHHHHHHHHccCChhhCCCHHHHHH
Confidence 221 00 00 11346889999999999999999999999874
No 335
>cd05070 PTKc_Fyn_Yrk Catalytic domain of the Protein Tyrosine Kinases, Fyn and Yrk. Protein Tyrosine Kinase (PTK) family; Fyn and Yrk kinases; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fyn and Yrk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that r
Probab=100.00 E-value=1.1e-37 Score=301.20 Aligned_cols=243 Identities=24% Similarity=0.345 Sum_probs=190.3
Q ss_pred cceeEeeeeccCCceEEEEEEEcCCCCEEEEEEeccc---hhhHHHHHHHHHHcCCCCccccceeeeeccCCCceEEEEE
Q 011138 137 ISYMAERVVGTGSFGVVFQAKCLETGDSVAIKKVLQD---KRYKNRELQIMRLLNHPNVVSLKHCFFSTTEKDELYLNLV 213 (492)
Q Consensus 137 ~~y~~~~~lG~G~fg~Vy~~~~~~~g~~vAiK~~~~~---~~~~~~E~~il~~l~h~nIv~l~~~~~~~~~~~~~~~~lV 213 (492)
.+|.+.+.||+|+||.||+|.+. .+..||+|.+... .....+|+.+++.++|+||+++++++. . ...++|
T Consensus 6 ~~~~~~~~ig~g~~~~v~~~~~~-~~~~~~~k~~~~~~~~~~~~~~E~~~l~~l~~~~i~~~~~~~~-----~-~~~~lv 78 (260)
T cd05070 6 ESLQLIKKLGNGQFGEVWMGTWN-GNTKVAVKTLKPGTMSPESFLEEAQIMKKLRHDKLVQLYAVVS-----E-EPIYIV 78 (260)
T ss_pred HHhhhhheeccccCceEEEEEec-CCceeEEEEecCCCCCHHHHHHHHHHHHhcCCCceEEEEeEEC-----C-CCcEEE
Confidence 46999999999999999999865 5677999988643 234568999999999999999988762 1 136799
Q ss_pred eeechh-hHHHHhhhhhhcCCCcCHHHHHHHHHHHHHHHHHHHhhCCcccCCCCCCceEEcCCCCcEEEeeecCccccCC
Q 011138 214 LEYISE-TVYRVSKHYTRMNQHVPILYVQLYTYQICRALNYLHHVVGVCHRDIKPQNLLVNPHTHQLKICDFGSAKMLVP 292 (492)
Q Consensus 214 ~E~~~~-~l~~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~yLH~~~givHrDlKp~NILl~~~~~~vkL~DFG~a~~~~~ 292 (492)
|||+.+ ++.+.+.. .....+++..+..++.||+.||.|||+ +||+||||||+||+++.++ .++|+|||++.....
T Consensus 79 ~e~~~~~~L~~~~~~--~~~~~~~~~~~~~~~~~l~~al~~lH~-~~i~H~di~p~Nili~~~~-~~~l~dfg~~~~~~~ 154 (260)
T cd05070 79 TEYMSKGSLLDFLKD--GEGRALKLPNLVDMAAQVAAGMAYIER-MNYIHRDLRSANILVGDGL-VCKIADFGLARLIED 154 (260)
T ss_pred EEecCCCcHHHHHHh--cCCCCCCHHHHHHHHHHHHHHHHHHHH-CCcccCCCccceEEEeCCc-eEEeCCceeeeeccC
Confidence 999986 44444322 123457889999999999999999997 9999999999999999877 799999999976543
Q ss_pred CCCC--ccceeccCccCchhhcCCCCCCcchhhHHHHHHHHHHHh-CCCCCCCCChHHHHHHHHHHhCCCCHHHHhhcCC
Q 011138 293 GEPN--ISYICSRYYRAPELIFGATEYTTAIDMWSIGCVLAELLL-GQPLFPGESGVDQLVEIIKILGTPTREEIKCMNP 369 (492)
Q Consensus 293 ~~~~--~~~~gt~~y~aPE~~~~~~~~~~~~DvwSlGvil~ell~-G~~pf~~~~~~~~~~~i~~~~g~p~~~~~~~~~~ 369 (492)
.... ....++..|+|||.+.+. .++.++|+|||||++|+|++ |.+||.+.+..+.+..+....
T Consensus 155 ~~~~~~~~~~~~~~y~aPE~~~~~-~~~~~~Di~slG~~l~~l~~~g~~p~~~~~~~~~~~~~~~~~------------- 220 (260)
T cd05070 155 NEYTARQGAKFPIKWTAPEAALYG-RFTIKSDVWSFGILLTELVTKGRVPYPGMNNREVLEQVERGY------------- 220 (260)
T ss_pred cccccccCCCCCccccChHHHhcC-CCcchhhhHHHHHHHHHHHhcCCCCCCCCCHHHHHHHHHcCC-------------
Confidence 2211 123345679999998654 48899999999999999999 999998877655554442210
Q ss_pred CCcccCCCcccCCCcccccCCCCChhHhhhhccccccCCCCcCCHHHhhC
Q 011138 370 NYTEFKFPQIKAHPWHKIFHKRMPPEALDLVSRLLQYSPSLRCTALEACA 419 (492)
Q Consensus 370 ~~~~~~~~~~~~~~~~~~~~~~~s~~~~~Li~~~L~~dP~~R~t~~e~l~ 419 (492)
..+ .+...+.++.+|+.+||..||.+|||+.++..
T Consensus 221 -----~~~----------~~~~~~~~~~~li~~~l~~~p~~Rpt~~~l~~ 255 (260)
T cd05070 221 -----RMP----------CPQDCPISLHELMLQCWKKDPEERPTFEYLQS 255 (260)
T ss_pred -----CCC----------CCCcCCHHHHHHHHHHcccCcccCcCHHHHHH
Confidence 000 12346889999999999999999999998863
No 336
>cd05034 PTKc_Src_like Catalytic domain of Src kinase-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Src kinase subfamily; catalytic (c) domain. Src subfamily members include Src, Lck, Hck, Blk, Lyn, Fgr, Fyn, Yrk, and Yes. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Src (or c-Src) proteins are cytoplasmic (or non-receptor) tyr kinases which are anchored to the plasma membrane. They contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-t
Probab=100.00 E-value=1.3e-37 Score=300.52 Aligned_cols=245 Identities=26% Similarity=0.345 Sum_probs=193.8
Q ss_pred ccceeEeeeeccCCceEEEEEEEcCCCCEEEEEEeccc---hhhHHHHHHHHHHcCCCCccccceeeeeccCCCceEEEE
Q 011138 136 TISYMAERVVGTGSFGVVFQAKCLETGDSVAIKKVLQD---KRYKNRELQIMRLLNHPNVVSLKHCFFSTTEKDELYLNL 212 (492)
Q Consensus 136 ~~~y~~~~~lG~G~fg~Vy~~~~~~~g~~vAiK~~~~~---~~~~~~E~~il~~l~h~nIv~l~~~~~~~~~~~~~~~~l 212 (492)
..+|.+.+.||+|+||.||+|.+. .+..||||.+..+ .....+|+.+++.++|+||+++++++ ......++
T Consensus 5 ~~~~~i~~~ig~g~~~~v~~~~~~-~~~~~~vK~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~-----~~~~~~~~ 78 (261)
T cd05034 5 RESLKLERKLGAGQFGEVWMGTWN-GTTKVAVKTLKPGTMSPEAFLQEAQIMKKLRHDKLVQLYAVC-----SEEEPIYI 78 (261)
T ss_pred hhheeeeeeeccCcceEEEEEEEc-CCceEEEEEecCCccCHHHHHHHHHHHhhCCCCCEeeeeeee-----ecCCceEE
Confidence 457999999999999999999875 5578999988653 23456899999999999999999987 33345899
Q ss_pred Eeeechhh-HHHHhhhhhhcCCCcCHHHHHHHHHHHHHHHHHHHhhCCcccCCCCCCceEEcCCCCcEEEeeecCccccC
Q 011138 213 VLEYISET-VYRVSKHYTRMNQHVPILYVQLYTYQICRALNYLHHVVGVCHRDIKPQNLLVNPHTHQLKICDFGSAKMLV 291 (492)
Q Consensus 213 V~E~~~~~-l~~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~yLH~~~givHrDlKp~NILl~~~~~~vkL~DFG~a~~~~ 291 (492)
||||+.++ +.+.+.. .....+++..+..++.||+.||.|||+ +||+|+||||+||+++.++ .+||+|||++....
T Consensus 79 v~e~~~~~~L~~~i~~--~~~~~~~~~~~~~~~~~i~~al~~lh~-~~i~h~di~p~nili~~~~-~~~l~d~g~~~~~~ 154 (261)
T cd05034 79 VTEYMSKGSLLDFLKS--GEGKKLRLPQLVDMAAQIAEGMAYLES-RNYIHRDLAARNILVGENL-VCKIADFGLARLIE 154 (261)
T ss_pred EEeccCCCCHHHHHhc--cccCCCCHHHHHHHHHHHHHHHHHHHh-CCcccCCcchheEEEcCCC-CEEECccccceecc
Confidence 99999864 4444322 123468889999999999999999997 8999999999999999887 79999999987654
Q ss_pred CCCC--CccceeccCccCchhhcCCCCCCcchhhHHHHHHHHHHHh-CCCCCCCCChHHHHHHHHHHhCCCCHHHHhhcC
Q 011138 292 PGEP--NISYICSRYYRAPELIFGATEYTTAIDMWSIGCVLAELLL-GQPLFPGESGVDQLVEIIKILGTPTREEIKCMN 368 (492)
Q Consensus 292 ~~~~--~~~~~gt~~y~aPE~~~~~~~~~~~~DvwSlGvil~ell~-G~~pf~~~~~~~~~~~i~~~~g~p~~~~~~~~~ 368 (492)
.... .....++..|+|||.+.+. .++.++|+|||||++|+|++ |+.||.+.+....+..+......
T Consensus 155 ~~~~~~~~~~~~~~~y~~PE~~~~~-~~~~~~Di~slG~il~~l~t~g~~p~~~~~~~~~~~~~~~~~~~---------- 223 (261)
T cd05034 155 DDEYTAREGAKFPIKWTAPEAANYG-RFTIKSDVWSFGILLTEIVTYGRVPYPGMTNREVLEQVERGYRM---------- 223 (261)
T ss_pred chhhhhhhccCCCccccCHHHhccC-CcCchhHHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHcCCCC----------
Confidence 3211 1122345689999998654 48999999999999999998 99999887766655554331100
Q ss_pred CCCcccCCCcccCCCcccccCCCCChhHhhhhccccccCCCCcCCHHHhhC
Q 011138 369 PNYTEFKFPQIKAHPWHKIFHKRMPPEALDLVSRLLQYSPSLRCTALEACA 419 (492)
Q Consensus 369 ~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~Li~~~L~~dP~~R~t~~e~l~ 419 (492)
+ .+...+.++.+++.+||..||++||++.++++
T Consensus 224 --------~----------~~~~~~~~~~~~i~~~l~~~p~~Rp~~~~l~~ 256 (261)
T cd05034 224 --------P----------RPPNCPEELYDLMLQCWDKDPEERPTFEYLQS 256 (261)
T ss_pred --------C----------CCCCCCHHHHHHHHHHcccCcccCCCHHHHHH
Confidence 0 11235788999999999999999999999874
No 337
>cd05065 PTKc_EphR_B Catalytic domain of the Protein Tyrosine Kinases, Class EphB Ephrin Receptors. Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; class EphB receptors; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). Class EphB receptors bind to transmembrane ephrin-B ligands. There are six vertebrate EhpB receptors (EphB1-6), which display promiscuous interactions with three ephrin-B ligands. One exception is EphB2, which also interacts with ephrin A5. EphRs contain an ephrin-binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephr
Probab=100.00 E-value=1e-37 Score=302.91 Aligned_cols=244 Identities=23% Similarity=0.351 Sum_probs=190.3
Q ss_pred ceeEeeeeccCCceEEEEEEEcCCCC---EEEEEEeccc-----hhhHHHHHHHHHHcCCCCccccceeeeeccCCCceE
Q 011138 138 SYMAERVVGTGSFGVVFQAKCLETGD---SVAIKKVLQD-----KRYKNRELQIMRLLNHPNVVSLKHCFFSTTEKDELY 209 (492)
Q Consensus 138 ~y~~~~~lG~G~fg~Vy~~~~~~~g~---~vAiK~~~~~-----~~~~~~E~~il~~l~h~nIv~l~~~~~~~~~~~~~~ 209 (492)
.|.+.+.||+|+||.||+|.+..+++ .||||.+... ...+.+|+.+++.++||||+++++++ .+...
T Consensus 5 ~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~ni~~~~~~~-----~~~~~ 79 (269)
T cd05065 5 CVKIEEVIGAGEFGEVCRGRLKLPGKREIFVAIKTLKSGYTEKQRRDFLSEASIMGQFDHPNIIHLEGVV-----TKSRP 79 (269)
T ss_pred HeEEEeEecCCCCCeEEEEEEecCCCCceeEEEEEcCCCCCHHHHHHHHHHHHHHHhCCCcCcceEEEEE-----CCCCc
Confidence 58999999999999999999887765 5999987542 22455799999999999999999987 44445
Q ss_pred EEEEeeechhhHHHHhhhhhhcCCCcCHHHHHHHHHHHHHHHHHHHhhCCcccCCCCCCceEEcCCCCcEEEeeecCccc
Q 011138 210 LNLVLEYISETVYRVSKHYTRMNQHVPILYVQLYTYQICRALNYLHHVVGVCHRDIKPQNLLVNPHTHQLKICDFGSAKM 289 (492)
Q Consensus 210 ~~lV~E~~~~~l~~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~yLH~~~givHrDlKp~NILl~~~~~~vkL~DFG~a~~ 289 (492)
.++||||++++.+..... .....+++..+..++.|++.||.|||+ +|++||||||+||+++.++ .+||+|||++..
T Consensus 80 ~~lv~e~~~~~~L~~~l~--~~~~~~~~~~~~~i~~~l~~al~~lH~-~g~~H~dl~p~nili~~~~-~~kl~dfg~~~~ 155 (269)
T cd05065 80 VMIITEFMENGALDSFLR--QNDGQFTVIQLVGMLRGIAAGMKYLSE-MNYVHRDLAARNILVNSNL-VCKVSDFGLSRF 155 (269)
T ss_pred eEEEEecCCCCcHHHHHh--hCCCCCCHHHHHHHHHHHHHHHHHHHH-CCEeecccChheEEEcCCC-cEEECCCccccc
Confidence 889999998754432221 223568889999999999999999997 9999999999999999877 799999999876
Q ss_pred cCCCCCCcc---ce---eccCccCchhhcCCCCCCcchhhHHHHHHHHHHHh-CCCCCCCCChHHHHHHHHHHhCCCCHH
Q 011138 290 LVPGEPNIS---YI---CSRYYRAPELIFGATEYTTAIDMWSIGCVLAELLL-GQPLFPGESGVDQLVEIIKILGTPTRE 362 (492)
Q Consensus 290 ~~~~~~~~~---~~---gt~~y~aPE~~~~~~~~~~~~DvwSlGvil~ell~-G~~pf~~~~~~~~~~~i~~~~g~p~~~ 362 (492)
......... .. .+..|+|||.+.+. .++.++|||||||++|||++ |..||...+..+....+...
T Consensus 156 ~~~~~~~~~~~~~~~~~~~~~y~~PE~~~~~-~~~~~~DvwslG~~l~e~l~~g~~p~~~~~~~~~~~~i~~~------- 227 (269)
T cd05065 156 LEDDTSDPTYTSSLGGKIPIRWTAPEAIAYR-KFTSASDVWSYGIVMWEVMSYGERPYWDMSNQDVINAIEQD------- 227 (269)
T ss_pred cccCccccccccccCCCcceeecCHhHhccC-cccchhhhhhhHHHHHHHhcCCCCCCCCCCHHHHHHHHHcC-------
Confidence 543222111 11 13579999998654 48999999999999999886 99999887665544443211
Q ss_pred HHhhcCCCCcccCCCcccCCCcccccCCCCChhHhhhhccccccCCCCcCCHHHhhC
Q 011138 363 EIKCMNPNYTEFKFPQIKAHPWHKIFHKRMPPEALDLVSRLLQYSPSLRCTALEACA 419 (492)
Q Consensus 363 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~Li~~~L~~dP~~R~t~~e~l~ 419 (492)
...+ .+..++.++.+++.+||..||.+||++.+++.
T Consensus 228 -----------~~~~----------~~~~~~~~~~~li~~~l~~~p~~Rp~~~~i~~ 263 (269)
T cd05065 228 -----------YRLP----------PPMDCPTALHQLMLDCWQKDRNARPKFGQIVS 263 (269)
T ss_pred -----------CcCC----------CcccCCHHHHHHHHHHcCCChhhCcCHHHHHH
Confidence 1111 11246788999999999999999999999875
No 338
>cd05099 PTKc_FGFR4 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 4. Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 4 (FGFR4); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR4 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to
Probab=100.00 E-value=1.5e-37 Score=308.99 Aligned_cols=249 Identities=22% Similarity=0.330 Sum_probs=190.9
Q ss_pred cccceeEeeeeccCCceEEEEEEEcC-------CCCEEEEEEeccch-----hhHHHHHHHHHHc-CCCCccccceeeee
Q 011138 135 QTISYMAERVVGTGSFGVVFQAKCLE-------TGDSVAIKKVLQDK-----RYKNRELQIMRLL-NHPNVVSLKHCFFS 201 (492)
Q Consensus 135 ~~~~y~~~~~lG~G~fg~Vy~~~~~~-------~g~~vAiK~~~~~~-----~~~~~E~~il~~l-~h~nIv~l~~~~~~ 201 (492)
...+|.+++.||+|+||.||+|.+.. ....||+|.+.... ....+|+.+++.+ +||||+++++++
T Consensus 10 ~~~~~~~~~~lg~G~~g~vy~~~~~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~-- 87 (314)
T cd05099 10 PRDRLVLGKPLGEGCFGQVVRAEAYGIDKSRPDQTVTVAVKMLKDNATDKDLADLISEMELMKLIGKHKNIINLLGVC-- 87 (314)
T ss_pred cHHHeeeeeeecCCCcccEEEeeecccCCccCCcceEEEEEecCCCCChHHHHHHHHHHHHHHhccCCCCeeeEEEEE--
Confidence 34579999999999999999998642 34579999876432 2345799999999 599999999988
Q ss_pred ccCCCceEEEEEeeechhh-HHHHhhhhhh------------cCCCcCHHHHHHHHHHHHHHHHHHHhhCCcccCCCCCC
Q 011138 202 TTEKDELYLNLVLEYISET-VYRVSKHYTR------------MNQHVPILYVQLYTYQICRALNYLHHVVGVCHRDIKPQ 268 (492)
Q Consensus 202 ~~~~~~~~~~lV~E~~~~~-l~~~~~~~~~------------~~~~~~~~~~~~i~~qi~~aL~yLH~~~givHrDlKp~ 268 (492)
.+..++|+||||+.++ +...+..... ....+++..+..++.||+.||.|||+ +||+||||||+
T Consensus 88 ---~~~~~~~lv~e~~~~g~L~~~i~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~lH~-~gi~H~dlkp~ 163 (314)
T cd05099 88 ---TQEGPLYVIVEYAAKGNLREFLRARRPPGPDYTFDITKVPEEQLSFKDLVSCAYQVARGMEYLES-RRCIHRDLAAR 163 (314)
T ss_pred ---ccCCceEEEEecCCCCcHHHHHHhcCCCcccccccccCCcccccCHHHHHHHHHHHHHHHHHHHH-CCeeeccccce
Confidence 3445689999999864 5444433211 12457888899999999999999997 99999999999
Q ss_pred ceEEcCCCCcEEEeeecCccccCCCCC---CccceeccCccCchhhcCCCCCCcchhhHHHHHHHHHHHh-CCCCCCCCC
Q 011138 269 NLLVNPHTHQLKICDFGSAKMLVPGEP---NISYICSRYYRAPELIFGATEYTTAIDMWSIGCVLAELLL-GQPLFPGES 344 (492)
Q Consensus 269 NILl~~~~~~vkL~DFG~a~~~~~~~~---~~~~~gt~~y~aPE~~~~~~~~~~~~DvwSlGvil~ell~-G~~pf~~~~ 344 (492)
|||++.++ .+||+|||+++....... .....++..|+|||++.+. .++.++|||||||++|+|++ |..||.+..
T Consensus 164 Nill~~~~-~~kL~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~-~~~~~~DiwslG~~l~el~~~g~~p~~~~~ 241 (314)
T cd05099 164 NVLVTEDN-VMKIADFGLARGVHDIDYYKKTSNGRLPVKWMAPEALFDR-VYTHQSDVWSFGILMWEIFTLGGSPYPGIP 241 (314)
T ss_pred eEEEcCCC-cEEEccccccccccccccccccccCCCCccccCHHHHccC-CcCccchhhHHHHHHHHHHhCCCCCCCCCC
Confidence 99999887 799999999976532211 1122344679999998654 58999999999999999998 899998776
Q ss_pred hHHHHHHHHHHhCCCCHHHHhhcCCCCcccCCCcccCCCcccccCCCCChhHhhhhccccccCCCCcCCHHHhhC
Q 011138 345 GVDQLVEIIKILGTPTREEIKCMNPNYTEFKFPQIKAHPWHKIFHKRMPPEALDLVSRLLQYSPSLRCTALEACA 419 (492)
Q Consensus 345 ~~~~~~~i~~~~g~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~Li~~~L~~dP~~R~t~~e~l~ 419 (492)
..+.+..+... .... .+..++.++++||.+||..||.+|||+.++++
T Consensus 242 ~~~~~~~~~~~----------------~~~~------------~~~~~~~~l~~li~~cl~~~p~~Rps~~~ll~ 288 (314)
T cd05099 242 VEELFKLLREG----------------HRMD------------KPSNCTHELYMLMRECWHAVPTQRPTFKQLVE 288 (314)
T ss_pred HHHHHHHHHcC----------------CCCC------------CCCCCCHHHHHHHHHHcCCCcccCcCHHHHHH
Confidence 54444333210 0000 12346789999999999999999999999885
No 339
>cd05047 PTKc_Tie Catalytic domain of Tie Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Tie subfamily; catalytic (c) domain. The Tie subfamily consists of Tie1 and Tie2. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie proteins are receptor tyr kinases (RTKs) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie receptors are specifically expressed in endothelial cells and hematopoietic stem cells. The angiopoietins (Ang-1 to Ang-4) serve as ligands for Tie2, while no specific l
Probab=100.00 E-value=9e-38 Score=303.64 Aligned_cols=240 Identities=23% Similarity=0.332 Sum_probs=182.7
Q ss_pred eeccCCceEEEEEEEcCCCCE--EEEEEeccc-----hhhHHHHHHHHHHc-CCCCccccceeeeeccCCCceEEEEEee
Q 011138 144 VVGTGSFGVVFQAKCLETGDS--VAIKKVLQD-----KRYKNRELQIMRLL-NHPNVVSLKHCFFSTTEKDELYLNLVLE 215 (492)
Q Consensus 144 ~lG~G~fg~Vy~~~~~~~g~~--vAiK~~~~~-----~~~~~~E~~il~~l-~h~nIv~l~~~~~~~~~~~~~~~~lV~E 215 (492)
.||+|+||.||+|.+..+|.. +|+|.+... .....+|+.+++.+ +||||+++++++ ....++++|||
T Consensus 2 ~lg~g~~g~v~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~-----~~~~~~~lv~e 76 (270)
T cd05047 2 VIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGHHPNIINLLGAC-----EHRGYLYLAIE 76 (270)
T ss_pred cCCCCCCceEEEEEEcCCCCeeEEEEEEccccCCHHHHHHHHHHHHHHHhhccCCCeeeEEEEE-----ecCCCceEEEE
Confidence 589999999999999888764 688877532 12345799999999 799999999988 33445889999
Q ss_pred echh-hHHHHhhhhhh------------cCCCcCHHHHHHHHHHHHHHHHHHHhhCCcccCCCCCCceEEcCCCCcEEEe
Q 011138 216 YISE-TVYRVSKHYTR------------MNQHVPILYVQLYTYQICRALNYLHHVVGVCHRDIKPQNLLVNPHTHQLKIC 282 (492)
Q Consensus 216 ~~~~-~l~~~~~~~~~------------~~~~~~~~~~~~i~~qi~~aL~yLH~~~givHrDlKp~NILl~~~~~~vkL~ 282 (492)
|+.+ ++.+.+..... ....+++..+..++.||+.||+|||+ +|++||||||+|||++.++ .+||+
T Consensus 77 ~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~al~~lH~-~~i~H~dikp~nili~~~~-~~kl~ 154 (270)
T cd05047 77 YAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAADVARGMDYLSQ-KQFIHRDLAARNILVGENY-VAKIA 154 (270)
T ss_pred eCCCCcHHHHHHhccccccccccccccCCcCCCCHHHHHHHHHHHHHHHHHHHH-CCEeecccccceEEEcCCC-eEEEC
Confidence 9985 55554433211 12347888999999999999999997 9999999999999999887 79999
Q ss_pred eecCccccCCCCCCccceeccCccCchhhcCCCCCCcchhhHHHHHHHHHHHh-CCCCCCCCChHHHHHHHHHHhCCCCH
Q 011138 283 DFGSAKMLVPGEPNISYICSRYYRAPELIFGATEYTTAIDMWSIGCVLAELLL-GQPLFPGESGVDQLVEIIKILGTPTR 361 (492)
Q Consensus 283 DFG~a~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DvwSlGvil~ell~-G~~pf~~~~~~~~~~~i~~~~g~p~~ 361 (492)
|||++..............+..|+|||++.+ ..++.++|||||||++|||++ |..||.+.+..+....+...
T Consensus 155 dfgl~~~~~~~~~~~~~~~~~~y~apE~~~~-~~~~~~~Di~slG~il~el~~~g~~pf~~~~~~~~~~~~~~~------ 227 (270)
T cd05047 155 DFGLSRGQEVYVKKTMGRLPVRWMAIESLNY-SVYTTNSDVWSYGVLLWEIVSLGGTPYCGMTCAELYEKLPQG------ 227 (270)
T ss_pred CCCCccccchhhhccCCCCccccCChHHHcc-CCCCchhhHHHHHHHHHHHHcCCCCCccccCHHHHHHHHhCC------
Confidence 9999863321111112233567999999854 458999999999999999996 99999876654433332110
Q ss_pred HHHhhcCCCCcccCCCcccCCCcccccCCCCChhHhhhhccccccCCCCcCCHHHhhC
Q 011138 362 EEIKCMNPNYTEFKFPQIKAHPWHKIFHKRMPPEALDLVSRLLQYSPSLRCTALEACA 419 (492)
Q Consensus 362 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~Li~~~L~~dP~~R~t~~e~l~ 419 (492)
... ..+..++.++.+|+.+||..||.+|||+.++++
T Consensus 228 ------------~~~----------~~~~~~~~~~~~li~~~l~~~p~~Rps~~~il~ 263 (270)
T cd05047 228 ------------YRL----------EKPLNCDDEVYDLMRQCWREKPYERPSFAQILV 263 (270)
T ss_pred ------------CCC----------CCCCcCCHHHHHHHHHHcccChhhCCCHHHHHH
Confidence 000 011246788999999999999999999999975
No 340
>cd05107 PTKc_PDGFR_beta Catalytic domain of the Protein Tyrosine Kinase, Platelet Derived Growth Factor Receptor beta. Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) beta; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR beta is a receptor tyr kinase (RTK) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding to its ligands, the PDGFs, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. PDGFR beta forms homodimers or heterodimers with PDGFR alpha, depending on the nature of the PDGF ligand. PDGF-BB and PDGF-D
Probab=100.00 E-value=1.3e-37 Score=318.62 Aligned_cols=252 Identities=23% Similarity=0.355 Sum_probs=192.7
Q ss_pred ccccceeEeeeeccCCceEEEEEEEc-----CCCCEEEEEEeccch-----hhHHHHHHHHHHcC-CCCccccceeeeec
Q 011138 134 KQTISYMAERVVGTGSFGVVFQAKCL-----ETGDSVAIKKVLQDK-----RYKNRELQIMRLLN-HPNVVSLKHCFFST 202 (492)
Q Consensus 134 ~~~~~y~~~~~lG~G~fg~Vy~~~~~-----~~g~~vAiK~~~~~~-----~~~~~E~~il~~l~-h~nIv~l~~~~~~~ 202 (492)
....+|.+++.||+|+||.||+|++. .+++.||+|++.... ....+|+.+|..+. |||||++++++..
T Consensus 34 ~~~~~~~~~~~lG~G~fG~Vy~~~~~~~~~~~~~~~vavK~l~~~~~~~~~~~~~~E~~~l~~l~~H~niv~~~~~~~~- 112 (401)
T cd05107 34 MPRDNLVLGRTLGSGAFGRVVEATAHGLSHSQSTMKVAVKMLKSTARSSEKQALMSELKIMSHLGPHLNIVNLLGACTK- 112 (401)
T ss_pred ecHHHeehhhhccCCCceeEEEEEEcCCCCCCCceEEEEEecCCCCChhHHHHHHHHHHHHHhcCCCCCeEEEEEEEcc-
Confidence 33456889999999999999999864 345689999986432 23457999999998 9999999998833
Q ss_pred cCCCceEEEEEeeechh-hHHHHhhhhhh---------------------------------------------------
Q 011138 203 TEKDELYLNLVLEYISE-TVYRVSKHYTR--------------------------------------------------- 230 (492)
Q Consensus 203 ~~~~~~~~~lV~E~~~~-~l~~~~~~~~~--------------------------------------------------- 230 (492)
...+++||||+.+ +|.+.+.....
T Consensus 113 ----~~~~~iv~E~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 188 (401)
T cd05107 113 ----GGPIYIITEYCRYGDLVDYLHRNKHTFLQYYLDKNRDDGSLISGGSTPLSQRKSHVSLGSESDGGYMDMSKDESAD 188 (401)
T ss_pred ----CCCcEEEEeccCCCcHHHHHHhccccchhhhcccccccccccccccccccccccchhhhhccCccccccCCccccC
Confidence 3458899999985 45444432110
Q ss_pred -------------------------------------------cCCCcCHHHHHHHHHHHHHHHHHHHhhCCcccCCCCC
Q 011138 231 -------------------------------------------MNQHVPILYVQLYTYQICRALNYLHHVVGVCHRDIKP 267 (492)
Q Consensus 231 -------------------------------------------~~~~~~~~~~~~i~~qi~~aL~yLH~~~givHrDlKp 267 (492)
....+++..+..++.||+.||.|||+ +||+||||||
T Consensus 189 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~LH~-~~ivHrdlkp 267 (401)
T cd05107 189 YVPMQDMKGTVKYADIESSNYESPYDQYLPSAPERTRRDTLINESPALSYMDLVGFSYQVANGMEFLAS-KNCVHRDLAA 267 (401)
T ss_pred ccchhcchhhhhhhhhhccCcCCchhhhhcccCCCcchhhhhcCCCCCCHHHHHHHHHHHHHHHHHHhc-CCcCcccCCc
Confidence 11235667788899999999999997 9999999999
Q ss_pred CceEEcCCCCcEEEeeecCccccCCCC---CCccceeccCccCchhhcCCCCCCcchhhHHHHHHHHHHHh-CCCCCCCC
Q 011138 268 QNLLVNPHTHQLKICDFGSAKMLVPGE---PNISYICSRYYRAPELIFGATEYTTAIDMWSIGCVLAELLL-GQPLFPGE 343 (492)
Q Consensus 268 ~NILl~~~~~~vkL~DFG~a~~~~~~~---~~~~~~gt~~y~aPE~~~~~~~~~~~~DvwSlGvil~ell~-G~~pf~~~ 343 (492)
+|||++.++ .+||+|||+++...... ......+++.|+|||.+.+. .++.++|||||||++|||++ |..||...
T Consensus 268 ~NiLl~~~~-~~kL~DfGla~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~-~~~~~~DvwslGvil~e~l~~g~~P~~~~ 345 (401)
T cd05107 268 RNVLICEGK-LVKICDFGLARDIMRDSNYISKGSTFLPLKWMAPESIFNN-LYTTLSDVWSFGILLWEIFTLGGTPYPEL 345 (401)
T ss_pred ceEEEeCCC-EEEEEecCcceecccccccccCCCcCCCCceeChHHhcCC-CCCcHhHHHHHHHHHHHHHHcCCCCCCCC
Confidence 999999876 89999999997653222 12234567889999999654 48999999999999999998 89999876
Q ss_pred ChHHHHHHHHHHhCCCCHHHHhhcCCCCcccCCCcccCCCcccccCCCCChhHhhhhccccccCCCCcCCHHHhhCC
Q 011138 344 SGVDQLVEIIKILGTPTREEIKCMNPNYTEFKFPQIKAHPWHKIFHKRMPPEALDLVSRLLQYSPSLRCTALEACAH 420 (492)
Q Consensus 344 ~~~~~~~~i~~~~g~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~Li~~~L~~dP~~R~t~~e~l~H 420 (492)
...+.+...+.. + ... ..+..++.++.+||.+||..||.+||++.++++.
T Consensus 346 ~~~~~~~~~~~~-~----------------~~~----------~~p~~~~~~l~~li~~cl~~~P~~RPs~~ell~~ 395 (401)
T cd05107 346 PMNEQFYNAIKR-G----------------YRM----------AKPAHASDEIYEIMQKCWEEKFEIRPDFSQLVHL 395 (401)
T ss_pred CchHHHHHHHHc-C----------------CCC----------CCCCCCCHHHHHHHHHHcCCChhHCcCHHHHHHH
Confidence 655544443321 0 000 0123468899999999999999999999999863
No 341
>cd05101 PTKc_FGFR2 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 2. Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 2 (FGFR2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR2 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to
Probab=100.00 E-value=1.4e-37 Score=307.76 Aligned_cols=250 Identities=23% Similarity=0.334 Sum_probs=192.1
Q ss_pred cccceeEeeeeccCCceEEEEEEEc-------CCCCEEEEEEeccc-----hhhHHHHHHHHHHc-CCCCccccceeeee
Q 011138 135 QTISYMAERVVGTGSFGVVFQAKCL-------ETGDSVAIKKVLQD-----KRYKNRELQIMRLL-NHPNVVSLKHCFFS 201 (492)
Q Consensus 135 ~~~~y~~~~~lG~G~fg~Vy~~~~~-------~~g~~vAiK~~~~~-----~~~~~~E~~il~~l-~h~nIv~l~~~~~~ 201 (492)
...+|.+.+.||+|+||.||+|.+. .++..||+|.+... .....+|+.+++.+ +||||+++++++
T Consensus 13 ~~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~E~~~l~~l~~h~~i~~~~~~~-- 90 (304)
T cd05101 13 SRDKLTLGKPLGEGCFGQVVMAEALGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIINLLGAC-- 90 (304)
T ss_pred cHHHeeecceeeccCCceEEEEEEeccCCCCCCcceeEEeeecccccchHHHHHHHHHHHHHHhhccCCCchheeEEE--
Confidence 3457999999999999999999753 23457999987542 13355799999999 799999999988
Q ss_pred ccCCCceEEEEEeeechh-hHHHHhhhhhh------------cCCCcCHHHHHHHHHHHHHHHHHHHhhCCcccCCCCCC
Q 011138 202 TTEKDELYLNLVLEYISE-TVYRVSKHYTR------------MNQHVPILYVQLYTYQICRALNYLHHVVGVCHRDIKPQ 268 (492)
Q Consensus 202 ~~~~~~~~~~lV~E~~~~-~l~~~~~~~~~------------~~~~~~~~~~~~i~~qi~~aL~yLH~~~givHrDlKp~ 268 (492)
.....+|+||||+.+ ++...+..... ....+++..+..++.||+.||.|||+ +||+||||||+
T Consensus 91 ---~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~al~~LH~-~givH~dlkp~ 166 (304)
T cd05101 91 ---TQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDIARVPDEQMTFKDLVSCTYQVARGMEYLAS-QKCIHRDLAAR 166 (304)
T ss_pred ---ecCCceEEEEecCCCCcHHHHHHhcCCcccccccccccCCcccccHHHHHHHHHHHHHHHHHHHH-CCeeecccccc
Confidence 344468899999986 44444432211 12457788889999999999999997 99999999999
Q ss_pred ceEEcCCCCcEEEeeecCccccCCCCC---CccceeccCccCchhhcCCCCCCcchhhHHHHHHHHHHHh-CCCCCCCCC
Q 011138 269 NLLVNPHTHQLKICDFGSAKMLVPGEP---NISYICSRYYRAPELIFGATEYTTAIDMWSIGCVLAELLL-GQPLFPGES 344 (492)
Q Consensus 269 NILl~~~~~~vkL~DFG~a~~~~~~~~---~~~~~gt~~y~aPE~~~~~~~~~~~~DvwSlGvil~ell~-G~~pf~~~~ 344 (492)
|||++.++ .+||+|||+++....... .....+++.|+|||++.+. .++.++|||||||++|+|++ |..||.+.+
T Consensus 167 Nili~~~~-~~kl~D~g~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~-~~~~~~Di~slG~~l~el~~~g~~p~~~~~ 244 (304)
T cd05101 167 NVLVTENN-VMKIADFGLARDVNNIDYYKKTTNGRLPVKWMAPEALFDR-VYTHQSDVWSFGVLMWEIFTLGGSPYPGIP 244 (304)
T ss_pred eEEEcCCC-cEEECCCccceecccccccccccCCCCCceeeCchhhccC-CCCchhhHHHHHHHHHHHHcCCCCCcccCC
Confidence 99999877 799999999986643221 1223456789999998654 48999999999999999998 889998776
Q ss_pred hHHHHHHHHHHhCCCCHHHHhhcCCCCcccCCCcccCCCcccccCCCCChhHhhhhccccccCCCCcCCHHHhhCC
Q 011138 345 GVDQLVEIIKILGTPTREEIKCMNPNYTEFKFPQIKAHPWHKIFHKRMPPEALDLVSRLLQYSPSLRCTALEACAH 420 (492)
Q Consensus 345 ~~~~~~~i~~~~g~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~Li~~~L~~dP~~R~t~~e~l~H 420 (492)
..+....+... ... ..+..++.++++||.+||..+|.+||++.++++.
T Consensus 245 ~~~~~~~~~~~----------------~~~------------~~~~~~~~~~~~li~~cl~~~p~~Rps~~e~l~~ 292 (304)
T cd05101 245 VEELFKLLKEG----------------HRM------------DKPANCTNELYMMMRDCWHAIPSHRPTFKQLVED 292 (304)
T ss_pred HHHHHHHHHcC----------------CcC------------CCCCCCCHHHHHHHHHHcccChhhCCCHHHHHHH
Confidence 55444333210 000 0123468899999999999999999999999863
No 342
>cd05077 PTK_Jak1_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinase, Janus kinase 1. Protein Tyrosine Kinase (PTK) family; Janus kinase 1 (Jak1); pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak1 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity of the C-terminal catalytic dom
Probab=100.00 E-value=7e-38 Score=303.24 Aligned_cols=236 Identities=17% Similarity=0.206 Sum_probs=178.9
Q ss_pred eeccCCceEEEEEEEcCC------------CCEEEEEEeccch----hhHHHHHHHHHHcCCCCccccceeeeeccCCCc
Q 011138 144 VVGTGSFGVVFQAKCLET------------GDSVAIKKVLQDK----RYKNRELQIMRLLNHPNVVSLKHCFFSTTEKDE 207 (492)
Q Consensus 144 ~lG~G~fg~Vy~~~~~~~------------g~~vAiK~~~~~~----~~~~~E~~il~~l~h~nIv~l~~~~~~~~~~~~ 207 (492)
.||+|+||.||+|+.... ...|++|.+.... ....+|+.+++.++||||+++++++. +.
T Consensus 2 ~lg~G~~~~vy~~~~~~~~~~~~~~~~~~~~~~v~~k~~~~~~~~~~~~~~~~~~~l~~l~hp~iv~~~~~~~-----~~ 76 (262)
T cd05077 2 HLGRGTRTQIYAGILNYKDDDEDDGYSYEKEIKVILKVLDPSHRDISLAFFETASMMRQVSHKHIVLLYGVCV-----RD 76 (262)
T ss_pred ccccCCcceEeeeecccCCCccccccchhhceeEEEeecChhhhhHHHHHHHHHHHHHhCCCCCEeeEEEEEe-----cC
Confidence 589999999999985322 2358888764432 23456889999999999999999884 33
Q ss_pred eEEEEEeeechhhHHHHhhhhhhcCCCcCHHHHHHHHHHHHHHHHHHHhhCCcccCCCCCCceEEcCCCC------cEEE
Q 011138 208 LYLNLVLEYISETVYRVSKHYTRMNQHVPILYVQLYTYQICRALNYLHHVVGVCHRDIKPQNLLVNPHTH------QLKI 281 (492)
Q Consensus 208 ~~~~lV~E~~~~~l~~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~yLH~~~givHrDlKp~NILl~~~~~------~vkL 281 (492)
...++||||++++.+..... .....+++..+..++.||+.||.|||+ +||+||||||+|||++.++. .+|+
T Consensus 77 ~~~~lv~e~~~~~~l~~~~~--~~~~~~~~~~~~~i~~qi~~~l~~lH~-~~ivH~dlkp~Nill~~~~~~~~~~~~~~l 153 (262)
T cd05077 77 VENIMVEEFVEFGPLDLFMH--RKSDVLTTPWKFKVAKQLASALSYLED-KDLVHGNVCTKNILLAREGIDGECGPFIKL 153 (262)
T ss_pred CCCEEEEecccCCCHHHHHH--hcCCCCCHHHHHHHHHHHHHHHHHhhh-CCeECCCCCcccEEEecCCccCCCCceeEe
Confidence 34789999999776554322 223568899999999999999999997 99999999999999976542 2899
Q ss_pred eeecCccccCCCCCCccceeccCccCchhhcCCCCCCcchhhHHHHHHHHHHH-hCCCCCCCCChHHHHHHHHHHhCCCC
Q 011138 282 CDFGSAKMLVPGEPNISYICSRYYRAPELIFGATEYTTAIDMWSIGCVLAELL-LGQPLFPGESGVDQLVEIIKILGTPT 360 (492)
Q Consensus 282 ~DFG~a~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DvwSlGvil~ell-~G~~pf~~~~~~~~~~~i~~~~g~p~ 360 (492)
+|||++..... .....++..|+|||.+.+...++.++|||||||++|+|+ +|..||......+.. ....
T Consensus 154 ~d~g~~~~~~~---~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~~l~el~~~~~~p~~~~~~~~~~-~~~~------ 223 (262)
T cd05077 154 SDPGIPITVLS---RQECVERIPWIAPECVEDSKNLSIAADKWSFGTTLWEICYNGEIPLKDKTLAEKE-RFYE------ 223 (262)
T ss_pred CCCCCCccccC---cccccccccccChhhhcCCCCCCchhHHHHHHHHHHHHHhCCCCCCCCcchhHHH-HHHh------
Confidence 99999865432 224567889999999865566899999999999999998 588888765432211 1111
Q ss_pred HHHHhhcCCCCcccCCCcccCCCcccccCCCCChhHhhhhccccccCCCCcCCHHHhhCC
Q 011138 361 REEIKCMNPNYTEFKFPQIKAHPWHKIFHKRMPPEALDLVSRLLQYSPSLRCTALEACAH 420 (492)
Q Consensus 361 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~Li~~~L~~dP~~R~t~~e~l~H 420 (492)
.... .....++++.+||.+||+.||.+||++.+|+++
T Consensus 224 -----------~~~~------------~~~~~~~~~~~li~~cl~~dp~~Rp~~~~il~~ 260 (262)
T cd05077 224 -----------GQCM------------LVTPSCKELADLMTHCMNYDPNQRPFFRAIMRD 260 (262)
T ss_pred -----------cCcc------------CCCCChHHHHHHHHHHcCCChhhCcCHHHHHHh
Confidence 0000 011245789999999999999999999999874
No 343
>cd05069 PTKc_Yes Catalytic domain of the Protein Tyrosine Kinase, Yes. Protein Tyrosine Kinase (PTK) family; Yes kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Yes (or c-Yes) is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine an
Probab=100.00 E-value=2.1e-37 Score=299.20 Aligned_cols=243 Identities=24% Similarity=0.326 Sum_probs=190.5
Q ss_pred cceeEeeeeccCCceEEEEEEEcCCCCEEEEEEeccch---hhHHHHHHHHHHcCCCCccccceeeeeccCCCceEEEEE
Q 011138 137 ISYMAERVVGTGSFGVVFQAKCLETGDSVAIKKVLQDK---RYKNRELQIMRLLNHPNVVSLKHCFFSTTEKDELYLNLV 213 (492)
Q Consensus 137 ~~y~~~~~lG~G~fg~Vy~~~~~~~g~~vAiK~~~~~~---~~~~~E~~il~~l~h~nIv~l~~~~~~~~~~~~~~~~lV 213 (492)
.+|.+.+.||+|+||.||+|.+..+ ..+|+|.+.... ....+|+.+++.++|+||+++++++. + ...++|
T Consensus 6 ~~~~~~~~ig~g~~~~v~~~~~~~~-~~~~lK~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~-----~-~~~~~v 78 (260)
T cd05069 6 ESLRLDVKLGQGCFGEVWMGTWNGT-TKVAIKTLKPGTMMPEAFLQEAQIMKKLRHDKLVPLYAVVS-----E-EPIYIV 78 (260)
T ss_pred HHeeeeeeecCcCCCeEEEEEEcCC-ceEEEEEcccCCccHHHHHHHHHHHHhCCCCCeeeEEEEEc-----C-CCcEEE
Confidence 4699999999999999999987655 469999875432 33457999999999999999988762 1 236799
Q ss_pred eeechh-hHHHHhhhhhhcCCCcCHHHHHHHHHHHHHHHHHHHhhCCcccCCCCCCceEEcCCCCcEEEeeecCccccCC
Q 011138 214 LEYISE-TVYRVSKHYTRMNQHVPILYVQLYTYQICRALNYLHHVVGVCHRDIKPQNLLVNPHTHQLKICDFGSAKMLVP 292 (492)
Q Consensus 214 ~E~~~~-~l~~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~yLH~~~givHrDlKp~NILl~~~~~~vkL~DFG~a~~~~~ 292 (492)
|||+.+ ++.+.+... ....+++..+..++.||+.||.|||+ .||+||||||+||+++.++ .++|+|||++.....
T Consensus 79 ~e~~~~~~L~~~~~~~--~~~~~~~~~~~~~~~~l~~al~~lH~-~~i~H~dl~~~Nill~~~~-~~~l~dfg~~~~~~~ 154 (260)
T cd05069 79 TEFMGKGSLLDFLKEG--DGKYLKLPQLVDMAAQIADGMAYIER-MNYIHRDLRAANILVGDNL-VCKIADFGLARLIED 154 (260)
T ss_pred EEcCCCCCHHHHHhhC--CCCCCCHHHHHHHHHHHHHHHHHHHh-CCEeecccCcceEEEcCCC-eEEECCCccceEccC
Confidence 999986 555544321 23457888899999999999999997 8999999999999999887 799999999976533
Q ss_pred CCC--CccceeccCccCchhhcCCCCCCcchhhHHHHHHHHHHHh-CCCCCCCCChHHHHHHHHHHhCCCCHHHHhhcCC
Q 011138 293 GEP--NISYICSRYYRAPELIFGATEYTTAIDMWSIGCVLAELLL-GQPLFPGESGVDQLVEIIKILGTPTREEIKCMNP 369 (492)
Q Consensus 293 ~~~--~~~~~gt~~y~aPE~~~~~~~~~~~~DvwSlGvil~ell~-G~~pf~~~~~~~~~~~i~~~~g~p~~~~~~~~~~ 369 (492)
... .....++..|+|||.+.+. .++.++|||||||++|+|++ |..||.+....+....+....
T Consensus 155 ~~~~~~~~~~~~~~y~~Pe~~~~~-~~~~~~Di~slG~~l~el~t~g~~p~~~~~~~~~~~~~~~~~------------- 220 (260)
T cd05069 155 NEYTARQGAKFPIKWTAPEAALYG-RFTIKSDVWSFGILLTELVTKGRVPYPGMVNREVLEQVERGY------------- 220 (260)
T ss_pred CcccccCCCccchhhCCHHHhccC-CcChHHHHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHcCC-------------
Confidence 221 1223456789999988654 48999999999999999999 999998876655544432210
Q ss_pred CCcccCCCcccCCCcccccCCCCChhHhhhhccccccCCCCcCCHHHhhC
Q 011138 370 NYTEFKFPQIKAHPWHKIFHKRMPPEALDLVSRLLQYSPSLRCTALEACA 419 (492)
Q Consensus 370 ~~~~~~~~~~~~~~~~~~~~~~~s~~~~~Li~~~L~~dP~~R~t~~e~l~ 419 (492)
.. ..+..++..+.+|+.+||..||.+||+++++++
T Consensus 221 -----~~----------~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~i~~ 255 (260)
T cd05069 221 -----RM----------PCPQGCPESLHELMKLCWKKDPDERPTFEYIQS 255 (260)
T ss_pred -----CC----------CCCcccCHHHHHHHHHHccCCcccCcCHHHHHH
Confidence 00 012346889999999999999999999999875
No 344
>cd05039 PTKc_Csk_like Catalytic domain of C-terminal Src kinase-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; C-terminal Src kinase (Csk) subfamily; catalytic (c) domain. The Csk subfamily is composed of Csk, Chk, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. To inhibit Src kinases, Csk and Chk are translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Csk
Probab=100.00 E-value=1.9e-37 Score=298.60 Aligned_cols=241 Identities=25% Similarity=0.375 Sum_probs=190.8
Q ss_pred cceeEeeeeccCCceEEEEEEEcCCCCEEEEEEeccchh---hHHHHHHHHHHcCCCCccccceeeeeccCCCceEEEEE
Q 011138 137 ISYMAERVVGTGSFGVVFQAKCLETGDSVAIKKVLQDKR---YKNRELQIMRLLNHPNVVSLKHCFFSTTEKDELYLNLV 213 (492)
Q Consensus 137 ~~y~~~~~lG~G~fg~Vy~~~~~~~g~~vAiK~~~~~~~---~~~~E~~il~~l~h~nIv~l~~~~~~~~~~~~~~~~lV 213 (492)
.+|.+.+.||.|+||.||+|.. .|+.||+|.+..... ...+|+.+++.++|+||+++++++. +....++|
T Consensus 6 ~~~~~~~~ig~g~~g~v~~~~~--~~~~v~iK~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~-----~~~~~~~v 78 (256)
T cd05039 6 KELKLGATIGKGEFGDVMLGDY--RGQKVAVKCLKDDSTAAQAFLAEASVMTTLRHPNLVQLLGVVL-----QGNPLYIV 78 (256)
T ss_pred hhccceeeeecCCCceEEEEEe--cCcEEEEEEeccchhHHHHHHHHHHHHHhcCCcceeeeEEEEc-----CCCCeEEE
Confidence 3588999999999999999986 489999999866543 4557999999999999999999884 34458899
Q ss_pred eeechh-hHHHHhhhhhhcCCCcCHHHHHHHHHHHHHHHHHHHhhCCcccCCCCCCceEEcCCCCcEEEeeecCccccCC
Q 011138 214 LEYISE-TVYRVSKHYTRMNQHVPILYVQLYTYQICRALNYLHHVVGVCHRDIKPQNLLVNPHTHQLKICDFGSAKMLVP 292 (492)
Q Consensus 214 ~E~~~~-~l~~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~yLH~~~givHrDlKp~NILl~~~~~~vkL~DFG~a~~~~~ 292 (492)
|||+++ .+.+.+.. .....+++..+..++.|++.||.|||+ +||+||||||+||+++.++ .+||+|||.++....
T Consensus 79 ~e~~~~~~L~~~~~~--~~~~~~~~~~~~~~~~qi~~~l~~lh~-~~i~H~di~p~Nili~~~~-~~~l~d~g~~~~~~~ 154 (256)
T cd05039 79 TEYMAKGSLVDYLRS--RGRAVITLAQQLGFALDVCEGMEYLEE-KNFVHRDLAARNVLVSEDL-VAKVSDFGLAKEASQ 154 (256)
T ss_pred EEecCCCcHHHHHHh--cCCCCCCHHHHHHHHHHHHHHHHHHHh-CCccchhcccceEEEeCCC-CEEEccccccccccc
Confidence 999985 55544332 112368899999999999999999997 9999999999999999877 799999999986632
Q ss_pred CCCCccceeccCccCchhhcCCCCCCcchhhHHHHHHHHHHHh-CCCCCCCCChHHHHHHHHHHhCCCCHHHHhhcCCCC
Q 011138 293 GEPNISYICSRYYRAPELIFGATEYTTAIDMWSIGCVLAELLL-GQPLFPGESGVDQLVEIIKILGTPTREEIKCMNPNY 371 (492)
Q Consensus 293 ~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DvwSlGvil~ell~-G~~pf~~~~~~~~~~~i~~~~g~p~~~~~~~~~~~~ 371 (492)
. .....++..|+|||.+.+. .++.++|||||||++|+|++ |..||...+..+....+...
T Consensus 155 ~--~~~~~~~~~~~ape~~~~~-~~~~~~Di~slG~il~~l~~~g~~p~~~~~~~~~~~~~~~~---------------- 215 (256)
T cd05039 155 G--QDSGKLPVKWTAPEALREK-KFSTKSDVWSFGILLWEIYSFGRVPYPRIPLKDVVPHVEKG---------------- 215 (256)
T ss_pred c--cccCCCcccccCchhhcCC-cCCcHHHHHHHHHHHHHHHhcCCCCCCCCCHHHHHHHHhcC----------------
Confidence 2 2233446679999998654 48899999999999999997 99999876644433222110
Q ss_pred cccCCCcccCCCcccccCCCCChhHhhhhccccccCCCCcCCHHHhhC
Q 011138 372 TEFKFPQIKAHPWHKIFHKRMPPEALDLVSRLLQYSPSLRCTALEACA 419 (492)
Q Consensus 372 ~~~~~~~~~~~~~~~~~~~~~s~~~~~Li~~~L~~dP~~R~t~~e~l~ 419 (492)
+. ...+..+++++.+||.+||..||++||++.+++.
T Consensus 216 --~~----------~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~l~~ 251 (256)
T cd05039 216 --YR----------MEAPEGCPPEVYKVMKDCWELDPAKRPTFKQLRE 251 (256)
T ss_pred --CC----------CCCccCCCHHHHHHHHHHhccChhhCcCHHHHHH
Confidence 00 0012346899999999999999999999999875
No 345
>KOG1006 consensus Mitogen-activated protein kinase (MAPK) kinase MKK4 [Signal transduction mechanisms]
Probab=100.00 E-value=9.1e-40 Score=297.04 Aligned_cols=262 Identities=24% Similarity=0.357 Sum_probs=205.3
Q ss_pred eeEeeeeccCCceEEEEEEEcCCCCEEEEEEeccch-----hhHHHHHHH-HHHcCCCCccccceeeeeccCCCceEEEE
Q 011138 139 YMAERVVGTGSFGVVFQAKCLETGDSVAIKKVLQDK-----RYKNRELQI-MRLLNHPNVVSLKHCFFSTTEKDELYLNL 212 (492)
Q Consensus 139 y~~~~~lG~G~fg~Vy~~~~~~~g~~vAiK~~~~~~-----~~~~~E~~i-l~~l~h~nIv~l~~~~~~~~~~~~~~~~l 212 (492)
.+-...||.|+||+|++..++.+|+..|||++.... ..+..|.+. ++.-+.||||++|+..+..++ .+|
T Consensus 66 Lqdlg~iG~G~fG~V~KM~hk~sg~~mAVKrIr~~n~~keq~rll~e~d~~mks~~cp~IVkfyGa~F~EGd-----cWi 140 (361)
T KOG1006|consen 66 LQDLGEIGNGAFGTVNKMLHKPSGKLMAVKRIRSNNIEKEQKRLLMEHDTVMKSSNCPNIVKFYGALFSEGD-----CWI 140 (361)
T ss_pred HHHHHHhcCCcchhhhhhhcCccCcEEEEEEeeeccchHHHHHHHHHHHHHHhhcCCcHHHHHhhhhhcCCc-----eee
Confidence 334456999999999999999999999999985432 223345554 556679999999999876554 789
Q ss_pred EeeechhhHHHHhhh-hhhcCCCcCHHHHHHHHHHHHHHHHHHHhhCCcccCCCCCCceEEcCCCCcEEEeeecCccccC
Q 011138 213 VLEYISETVYRVSKH-YTRMNQHVPILYVQLYTYQICRALNYLHHVVGVCHRDIKPQNLLVNPHTHQLKICDFGSAKMLV 291 (492)
Q Consensus 213 V~E~~~~~l~~~~~~-~~~~~~~~~~~~~~~i~~qi~~aL~yLH~~~givHrDlKp~NILl~~~~~~vkL~DFG~a~~~~ 291 (492)
.||+|.-++..+.+. +......+++..+..|+...+.||.||.....|||||+||+|||++..| .|||||||++..+.
T Consensus 141 CMELMd~SlDklYk~vy~vq~~~ipE~Ilg~ItvatV~AL~yLK~~lkiIHRDvKPSNILldr~G-~vKLCDFGIcGqLv 219 (361)
T KOG1006|consen 141 CMELMDISLDKLYKRVYSVQKSRIPENILGHITVATVDALDYLKEELKIIHRDVKPSNILLDRHG-DVKLCDFGICGQLV 219 (361)
T ss_pred eHHHHhhhHHHHHHHHHHHHhccCcHhhhhheeeeehhHHHHHHHHhhhhhccCChhheEEecCC-CEeeecccchHhHH
Confidence 999998765544332 3344567899988899999999999999768999999999999999988 89999999998776
Q ss_pred CCCCCccceeccCccCchhhcCCCC-CCcchhhHHHHHHHHHHHhCCCCCCCCCh-HHHHHHHHHHhCCCCHHHHhhcCC
Q 011138 292 PGEPNISYICSRYYRAPELIFGATE-YTTAIDMWSIGCVLAELLLGQPLFPGESG-VDQLVEIIKILGTPTREEIKCMNP 369 (492)
Q Consensus 292 ~~~~~~~~~gt~~y~aPE~~~~~~~-~~~~~DvwSlGvil~ell~G~~pf~~~~~-~~~~~~i~~~~g~p~~~~~~~~~~ 369 (492)
..-..+...|...|||||.+..... |+-++||||||++|||+.||..||.+.+. .+++..+.. |.|+.-
T Consensus 220 ~SiAkT~daGCrpYmAPERi~p~~~gyDiRSDvWSLGITL~EvAtG~fPyr~w~svfeql~~Vv~--gdpp~l------- 290 (361)
T KOG1006|consen 220 DSIAKTVDAGCRPYMAPERIDPSDKGYDIRSDVWSLGITLYEVATGNFPYRKWDSVFEQLCQVVI--GDPPIL------- 290 (361)
T ss_pred HHHHhhhccCCccccChhccCCccCCcchhhhhhhhcceEeeeecCCCCcchHHHHHHHHHHHHc--CCCCee-------
Confidence 6666667789999999999965443 89999999999999999999999988654 233333322 333211
Q ss_pred CCcccCCCcccCCCcccccCCCCChhHhhhhccccccCCCCcCCHHHhhCCCCCCCCCCC
Q 011138 370 NYTEFKFPQIKAHPWHKIFHKRMPPEALDLVSRLLQYSPSLRCTALEACAHPFFDDLRDP 429 (492)
Q Consensus 370 ~~~~~~~~~~~~~~~~~~~~~~~s~~~~~Li~~~L~~dP~~R~t~~e~l~Hp~f~~~~~~ 429 (492)
.... -.-+.+..++.+|.-||.+|-..||...+++.+||++.+...
T Consensus 291 ----------~~~~----~~~~~s~~~~~fintCl~Kd~~~Rpky~~Lk~~~fyr~y~~~ 336 (361)
T KOG1006|consen 291 ----------LFDK----ECVHYSFSMVRFINTCLIKDRSDRPKYDDLKKFPFYRMYAVE 336 (361)
T ss_pred ----------cCcc----cccccCHHHHHHHHHHhhcccccCcchhhhhcCchhhhhhhc
Confidence 1000 001368899999999999999999999999999999976543
No 346
>cd05115 PTKc_Zap-70 Catalytic domain of the Protein Tyrosine Kinase, Zeta-chain-associated protein of 70kDa. Protein Tyrosine Kinase (PTK) family; Zeta-chain-associated protein of 70kDa (Zap-70); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Zap-70 is a member of the Syk subfamily of kinases, which are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. Zap-70 is primarily expressed in T-cells and NK cells, and is a crucial component in T-cell receptor (TCR) signaling. Zap-70 binds the phosphorylated ITAM (immunoreceptor tyr activation motif) sequences of the activated TCR zeta-chain through its SH2 domains, leading to its pho
Probab=100.00 E-value=1.2e-37 Score=300.62 Aligned_cols=237 Identities=24% Similarity=0.281 Sum_probs=182.7
Q ss_pred eeccCCceEEEEEEEc--CCCCEEEEEEeccch-----hhHHHHHHHHHHcCCCCccccceeeeeccCCCceEEEEEeee
Q 011138 144 VVGTGSFGVVFQAKCL--ETGDSVAIKKVLQDK-----RYKNRELQIMRLLNHPNVVSLKHCFFSTTEKDELYLNLVLEY 216 (492)
Q Consensus 144 ~lG~G~fg~Vy~~~~~--~~g~~vAiK~~~~~~-----~~~~~E~~il~~l~h~nIv~l~~~~~~~~~~~~~~~~lV~E~ 216 (492)
.||+|+||.||+|.+. .++..||+|++.... ....+|+.+++.++||||+++++++ .. ...++||||
T Consensus 2 ~ig~G~~g~v~~~~~~~~~~~~~vavk~~~~~~~~~~~~~~~~E~~~l~~l~h~~ii~~~~~~-----~~-~~~~lv~e~ 75 (257)
T cd05115 2 ELGSGNFGCVKKGVYKMRKKQIDVAIKVLKNENEKSVRDEMMREAEIMHQLDNPYIVRMIGVC-----EA-EALMLVMEM 75 (257)
T ss_pred ccCCCCcccEEEEEEecCCCceeEEEEEcccccChHHHHHHHHHHHHHHhcCCCCeEEEEEEE-----cC-CCeEEEEEe
Confidence 3899999999999765 445679999885432 2355799999999999999999876 22 247899999
Q ss_pred chhhHHHHhhhhhhcCCCcCHHHHHHHHHHHHHHHHHHHhhCCcccCCCCCCceEEcCCCCcEEEeeecCccccCCCCCC
Q 011138 217 ISETVYRVSKHYTRMNQHVPILYVQLYTYQICRALNYLHHVVGVCHRDIKPQNLLVNPHTHQLKICDFGSAKMLVPGEPN 296 (492)
Q Consensus 217 ~~~~l~~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~yLH~~~givHrDlKp~NILl~~~~~~vkL~DFG~a~~~~~~~~~ 296 (492)
++++.+.... ......+++..+..++.||+.||.|||+ +|++||||||+|||++.++ .+||+|||++.........
T Consensus 76 ~~~~~L~~~l--~~~~~~~~~~~~~~~~~~i~~~l~~lH~-~~i~H~dlkp~nil~~~~~-~~kl~dfg~~~~~~~~~~~ 151 (257)
T cd05115 76 ASGGPLNKFL--SGKKDEITVSNVVELMHQVSMGMKYLEG-KNFVHRDLAARNVLLVNQH-YAKISDFGLSKALGADDSY 151 (257)
T ss_pred CCCCCHHHHH--HhCCCCCCHHHHHHHHHHHHHHHHHHHh-cCeeecccchheEEEcCCC-cEEeccCCccccccCCccc
Confidence 9865443221 1223568999999999999999999997 9999999999999999877 7999999999755333211
Q ss_pred ----ccceeccCccCchhhcCCCCCCcchhhHHHHHHHHHHHh-CCCCCCCCChHHHHHHHHHHhCCCCHHHHhhcCCCC
Q 011138 297 ----ISYICSRYYRAPELIFGATEYTTAIDMWSIGCVLAELLL-GQPLFPGESGVDQLVEIIKILGTPTREEIKCMNPNY 371 (492)
Q Consensus 297 ----~~~~gt~~y~aPE~~~~~~~~~~~~DvwSlGvil~ell~-G~~pf~~~~~~~~~~~i~~~~g~p~~~~~~~~~~~~ 371 (492)
....++..|+|||.+.+. .++.++|||||||++|+|++ |..||......+....+.+. .
T Consensus 152 ~~~~~~~~~~~~y~aPE~~~~~-~~~~~~Di~slG~~l~el~~~g~~p~~~~~~~~~~~~~~~~--~------------- 215 (257)
T cd05115 152 YKARSAGKWPLKWYAPECINFR-KFSSRSDVWSYGITMWEAFSYGQKPYKKMKGPEVMSFIEQG--K------------- 215 (257)
T ss_pred eeccCCCCCCcccCCHHHHccC-CCCchhhHHHHHHHHHHHhcCCCCCcCcCCHHHHHHHHHCC--C-------------
Confidence 112235789999998654 48999999999999999996 99999887765544333221 0
Q ss_pred cccCCCcccCCCcccccCCCCChhHhhhhccccccCCCCcCCHHHhhC
Q 011138 372 TEFKFPQIKAHPWHKIFHKRMPPEALDLVSRLLQYSPSLRCTALEACA 419 (492)
Q Consensus 372 ~~~~~~~~~~~~~~~~~~~~~s~~~~~Li~~~L~~dP~~R~t~~e~l~ 419 (492)
.. .++...++++.+||.+||..||++||++.++++
T Consensus 216 -~~------------~~~~~~~~~l~~li~~c~~~~~~~Rp~~~~i~~ 250 (257)
T cd05115 216 -RL------------DCPAECPPEMYALMKDCWIYKWEDRPNFAKVEE 250 (257)
T ss_pred -CC------------CCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHH
Confidence 00 022346899999999999999999999999865
No 347
>cd05100 PTKc_FGFR3 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 3. Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 3 (FGFR3); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR3 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to
Probab=100.00 E-value=1.4e-37 Score=311.88 Aligned_cols=249 Identities=22% Similarity=0.332 Sum_probs=191.0
Q ss_pred ccceeEeeeeccCCceEEEEEEEcCC-------CCEEEEEEeccch-----hhHHHHHHHHHHc-CCCCccccceeeeec
Q 011138 136 TISYMAERVVGTGSFGVVFQAKCLET-------GDSVAIKKVLQDK-----RYKNRELQIMRLL-NHPNVVSLKHCFFST 202 (492)
Q Consensus 136 ~~~y~~~~~lG~G~fg~Vy~~~~~~~-------g~~vAiK~~~~~~-----~~~~~E~~il~~l-~h~nIv~l~~~~~~~ 202 (492)
..+|.+++.||+|+||.||+|.+... +..||+|.+.... ....+|+.+++++ +||||+++++++
T Consensus 11 ~~~~~i~~~ig~G~~g~v~~~~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~--- 87 (334)
T cd05100 11 RTRLTLGKPLGEGCFGQVVMAEAIGIDKDKPNKPVTVAVKMLKDDATDKDLSDLVSEMEMMKMIGKHKNIINLLGAC--- 87 (334)
T ss_pred HhHeeecceeccccCCcEEEEEEeccCCccCCcceeEEEEEcccccCHHHHHHHHHHHHHHHhhcCCCCeeeeeEEE---
Confidence 34699999999999999999986432 2368999875421 3445799999999 799999999988
Q ss_pred cCCCceEEEEEeeechh-hHHHHhhhhh------------hcCCCcCHHHHHHHHHHHHHHHHHHHhhCCcccCCCCCCc
Q 011138 203 TEKDELYLNLVLEYISE-TVYRVSKHYT------------RMNQHVPILYVQLYTYQICRALNYLHHVVGVCHRDIKPQN 269 (492)
Q Consensus 203 ~~~~~~~~~lV~E~~~~-~l~~~~~~~~------------~~~~~~~~~~~~~i~~qi~~aL~yLH~~~givHrDlKp~N 269 (492)
.....+++||||+++ ++.+.+.... .....+++..+..++.||+.||.|||+ +||+||||||+|
T Consensus 88 --~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~al~~LH~-~givH~dlkp~N 164 (334)
T cd05100 88 --TQDGPLYVLVEYASKGNLREYLRARRPPGMDYSFDTCKLPEEQLTFKDLVSCAYQVARGMEYLAS-QKCIHRDLAARN 164 (334)
T ss_pred --ccCCceEEEEecCCCCcHHHHHHhcCCcccccccccccCccccCCHHHHHHHHHHHHHHHHHHHH-CCeeccccccce
Confidence 344468899999986 4444443221 112347778888999999999999997 999999999999
Q ss_pred eEEcCCCCcEEEeeecCccccCCCCC---CccceeccCccCchhhcCCCCCCcchhhHHHHHHHHHHHh-CCCCCCCCCh
Q 011138 270 LLVNPHTHQLKICDFGSAKMLVPGEP---NISYICSRYYRAPELIFGATEYTTAIDMWSIGCVLAELLL-GQPLFPGESG 345 (492)
Q Consensus 270 ILl~~~~~~vkL~DFG~a~~~~~~~~---~~~~~gt~~y~aPE~~~~~~~~~~~~DvwSlGvil~ell~-G~~pf~~~~~ 345 (492)
||++.++ .+||+|||+++....... .....++..|+|||++.+. .++.++|||||||++|||++ |..||.+.+.
T Consensus 165 ill~~~~-~~kL~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~-~~~~~~Di~slG~il~el~~~g~~p~~~~~~ 242 (334)
T cd05100 165 VLVTEDN-VMKIADFGLARDVHNIDYYKKTTNGRLPVKWMAPEALFDR-VYTHQSDVWSFGVLLWEIFTLGGSPYPGIPV 242 (334)
T ss_pred EEEcCCC-cEEECCcccceecccccccccccCCCcCceEcCHHHhccC-CcCchhhhHHHHHHHHHHHhcCCCCCCCCCH
Confidence 9999887 799999999976533221 1122345679999999654 48899999999999999998 8999988765
Q ss_pred HHHHHHHHHHhCCCCHHHHhhcCCCCcccCCCcccCCCcccccCCCCChhHhhhhccccccCCCCcCCHHHhhCC
Q 011138 346 VDQLVEIIKILGTPTREEIKCMNPNYTEFKFPQIKAHPWHKIFHKRMPPEALDLVSRLLQYSPSLRCTALEACAH 420 (492)
Q Consensus 346 ~~~~~~i~~~~g~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~Li~~~L~~dP~~R~t~~e~l~H 420 (492)
.+....+... ... ..+..++.++.+||.+||+.+|.+||++.+++.+
T Consensus 243 ~~~~~~~~~~------------------~~~----------~~~~~~~~~l~~li~~cl~~~p~~Rps~~ell~~ 289 (334)
T cd05100 243 EELFKLLKEG------------------HRM----------DKPANCTHELYMIMRECWHAVPSQRPTFKQLVED 289 (334)
T ss_pred HHHHHHHHcC------------------CCC----------CCCCCCCHHHHHHHHHHcccChhhCcCHHHHHHH
Confidence 5544333210 000 0123467899999999999999999999999975
No 348
>cd05067 PTKc_Lck_Blk Catalytic domain of the Protein Tyrosine Kinases, Lymphocyte-specific kinase and Blk. Protein Tyrosine Kinase (PTK) family; Lck and Blk kinases; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Lck (lymphocyte-specific kinase) and Blk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Sr
Probab=100.00 E-value=1.5e-37 Score=300.25 Aligned_cols=243 Identities=23% Similarity=0.338 Sum_probs=191.4
Q ss_pred cceeEeeeeccCCceEEEEEEEcCCCCEEEEEEeccch---hhHHHHHHHHHHcCCCCccccceeeeeccCCCceEEEEE
Q 011138 137 ISYMAERVVGTGSFGVVFQAKCLETGDSVAIKKVLQDK---RYKNRELQIMRLLNHPNVVSLKHCFFSTTEKDELYLNLV 213 (492)
Q Consensus 137 ~~y~~~~~lG~G~fg~Vy~~~~~~~g~~vAiK~~~~~~---~~~~~E~~il~~l~h~nIv~l~~~~~~~~~~~~~~~~lV 213 (492)
.+|++.++||+|+||.||+|.+ .+++.||+|.+.... ....+|+.+++.++|+||+++++++. + ...++|
T Consensus 6 ~~~~~~~~ig~G~~g~v~~~~~-~~~~~~a~K~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~-----~-~~~~~v 78 (260)
T cd05067 6 ETLKLVKKLGAGQFGEVWMGYY-NGHTKVAIKSLKQGSMSPEAFLAEANLMKQLQHPRLVRLYAVVT-----Q-EPIYII 78 (260)
T ss_pred HHceeeeeeccCccceEEeeec-CCCceEEEEEecCCCCcHHHHHHHHHHHHhcCCcCeeeEEEEEc-----c-CCcEEE
Confidence 4699999999999999999985 467889999886533 34567999999999999999988752 1 237899
Q ss_pred eeechh-hHHHHhhhhhhcCCCcCHHHHHHHHHHHHHHHHHHHhhCCcccCCCCCCceEEcCCCCcEEEeeecCccccCC
Q 011138 214 LEYISE-TVYRVSKHYTRMNQHVPILYVQLYTYQICRALNYLHHVVGVCHRDIKPQNLLVNPHTHQLKICDFGSAKMLVP 292 (492)
Q Consensus 214 ~E~~~~-~l~~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~yLH~~~givHrDlKp~NILl~~~~~~vkL~DFG~a~~~~~ 292 (492)
|||+.+ .+.+.+.. .....+++..+..++.|++.||+|||+ .|++||||||+||+++.++ .++|+|||++.....
T Consensus 79 ~e~~~~~~L~~~~~~--~~~~~~~~~~~~~i~~~i~~al~~LH~-~~i~H~dl~p~ni~i~~~~-~~~l~dfg~~~~~~~ 154 (260)
T cd05067 79 TEYMENGSLVDFLKT--PEGIKLTINKLIDMAAQIAEGMAFIER-KNYIHRDLRAANILVSETL-CCKIADFGLARLIED 154 (260)
T ss_pred EEcCCCCCHHHHHHh--cCCCCCCHHHHHHHHHHHHHHHHHHhc-CCeecccccHHhEEEcCCC-CEEEccCcceeecCC
Confidence 999975 45444322 223568888999999999999999997 9999999999999999887 799999999976542
Q ss_pred CCC--CccceeccCccCchhhcCCCCCCcchhhHHHHHHHHHHHh-CCCCCCCCChHHHHHHHHHHhCCCCHHHHhhcCC
Q 011138 293 GEP--NISYICSRYYRAPELIFGATEYTTAIDMWSIGCVLAELLL-GQPLFPGESGVDQLVEIIKILGTPTREEIKCMNP 369 (492)
Q Consensus 293 ~~~--~~~~~gt~~y~aPE~~~~~~~~~~~~DvwSlGvil~ell~-G~~pf~~~~~~~~~~~i~~~~g~p~~~~~~~~~~ 369 (492)
... .....++..|+|||++.+. .++.++|||||||++|+|++ |++||.+.+..+....+....
T Consensus 155 ~~~~~~~~~~~~~~y~~pe~~~~~-~~~~~~Di~slG~~l~el~~~g~~p~~~~~~~~~~~~~~~~~------------- 220 (260)
T cd05067 155 NEYTAREGAKFPIKWTAPEAINYG-TFTIKSDVWSFGILLTEIVTYGRIPYPGMTNPEVIQNLERGY------------- 220 (260)
T ss_pred CCcccccCCcccccccCHHHhccC-CcCcccchHHHHHHHHHHHhCCCCCCCCCChHHHHHHHHcCC-------------
Confidence 221 1223456789999998654 48899999999999999998 999998877655444432210
Q ss_pred CCcccCCCcccCCCcccccCCCCChhHhhhhccccccCCCCcCCHHHhhC
Q 011138 370 NYTEFKFPQIKAHPWHKIFHKRMPPEALDLVSRLLQYSPSLRCTALEACA 419 (492)
Q Consensus 370 ~~~~~~~~~~~~~~~~~~~~~~~s~~~~~Li~~~L~~dP~~R~t~~e~l~ 419 (492)
..+ .+...+.++.+||.+||..||++||++++++.
T Consensus 221 -----~~~----------~~~~~~~~~~~li~~~l~~~p~~Rp~~~~l~~ 255 (260)
T cd05067 221 -----RMP----------RPDNCPEELYELMRLCWKEKPEERPTFEYLRS 255 (260)
T ss_pred -----CCC----------CCCCCCHHHHHHHHHHccCChhhCCCHHHHHH
Confidence 000 11346789999999999999999999999875
No 349
>cd05050 PTKc_Musk Catalytic domain of the Protein Tyrosine Kinase, Muscle-specific kinase. Protein Tyrosine Kinase (PTK) family; Muscle-specific kinase (Musk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Musk is a receptor tyr kinase (RTK) containing an extracellular region with four immunoglobulin-like domains and a cysteine-rich cluster, a transmembrane segment, and an intracellular catalytic domain. Musk is expressed and concentrated in the postsynaptic membrane in skeletal muscle. It is essential for the establishment of the neuromuscular junction (NMJ), a peripheral synapse that conveys signals from motor neurons to muscle cells. Agrin, a large proteoglycan released from motor neurons, stimulates M
Probab=100.00 E-value=1e-37 Score=306.07 Aligned_cols=248 Identities=24% Similarity=0.301 Sum_probs=191.3
Q ss_pred ccceeEeeeeccCCceEEEEEEEcC-----CCCEEEEEEeccc-----hhhHHHHHHHHHHcCCCCccccceeeeeccCC
Q 011138 136 TISYMAERVVGTGSFGVVFQAKCLE-----TGDSVAIKKVLQD-----KRYKNRELQIMRLLNHPNVVSLKHCFFSTTEK 205 (492)
Q Consensus 136 ~~~y~~~~~lG~G~fg~Vy~~~~~~-----~g~~vAiK~~~~~-----~~~~~~E~~il~~l~h~nIv~l~~~~~~~~~~ 205 (492)
..+|.+.+.||+|+||.||+|.+.. ++..||+|.+... .....+|+.+++.++||||+++++++ .
T Consensus 4 ~~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~ei~~l~~l~h~~iv~~~~~~-----~ 78 (288)
T cd05050 4 RNNIEYVRDIGQGAFGRVFQARAPGLLPYEPFTMVAVKMLKEEASADMQADFQREAALMAEFDHPNIVKLLGVC-----A 78 (288)
T ss_pred hHhceecccccccccccEEEEEEcccCCCCcceeEEEEecCCCcCHHHHHHHHHHHHHHHhcCCCchheEEEEE-----c
Confidence 3469999999999999999998753 6788999987543 23455799999999999999999987 3
Q ss_pred CceEEEEEeeechh-hHHHHhhhhh------------------hcCCCcCHHHHHHHHHHHHHHHHHHHhhCCcccCCCC
Q 011138 206 DELYLNLVLEYISE-TVYRVSKHYT------------------RMNQHVPILYVQLYTYQICRALNYLHHVVGVCHRDIK 266 (492)
Q Consensus 206 ~~~~~~lV~E~~~~-~l~~~~~~~~------------------~~~~~~~~~~~~~i~~qi~~aL~yLH~~~givHrDlK 266 (492)
+...+++||||+++ .+...+.... .....+++..+..++.||+.||.|||+ +|++|||||
T Consensus 79 ~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~aL~~lH~-~~i~H~dl~ 157 (288)
T cd05050 79 VGKPMCLLFEYMAYGDLNEFLRHRSPRAQCSLSHSTSSARKCGLNPLPLSCTEQLCIAKQVAAGMAYLSE-RKFVHRDLA 157 (288)
T ss_pred CCCccEEEEecCCCCCHHHHHHHcCccccccccccccccccccccccccCHHHHHHHHHHHHHHHHHHHh-CCeeccccc
Confidence 34457899999986 4444443211 111346788889999999999999997 999999999
Q ss_pred CCceEEcCCCCcEEEeeecCccccCCCCC---CccceeccCccCchhhcCCCCCCcchhhHHHHHHHHHHHh-CCCCCCC
Q 011138 267 PQNLLVNPHTHQLKICDFGSAKMLVPGEP---NISYICSRYYRAPELIFGATEYTTAIDMWSIGCVLAELLL-GQPLFPG 342 (492)
Q Consensus 267 p~NILl~~~~~~vkL~DFG~a~~~~~~~~---~~~~~gt~~y~aPE~~~~~~~~~~~~DvwSlGvil~ell~-G~~pf~~ 342 (492)
|+|||++.++ .+||+|||++........ .....++..|+|||.+.+. .++.++|||||||++|+|++ |..||.+
T Consensus 158 p~nil~~~~~-~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~-~~~~~~Dv~slG~il~el~~~~~~p~~~ 235 (288)
T cd05050 158 TRNCLVGENM-VVKIADFGLSRNIYSADYYKASENDAIPIRWMPPESIFYN-RYTTESDVWAYGVVLWEIFSYGMQPYYG 235 (288)
T ss_pred HhheEecCCC-ceEECccccceecccCccccccCCCccChhhcCHHHHhcC-CCCchhHHHHHHHHHHHHHhCCCCCCCC
Confidence 9999999887 799999999875432221 1123446679999998654 48999999999999999997 8899987
Q ss_pred CChHHHHHHHHHHhCCCCHHHHhhcCCCCcccCCCcccCCCcccccCCCCChhHhhhhccccccCCCCcCCHHHhhC
Q 011138 343 ESGVDQLVEIIKILGTPTREEIKCMNPNYTEFKFPQIKAHPWHKIFHKRMPPEALDLVSRLLQYSPSLRCTALEACA 419 (492)
Q Consensus 343 ~~~~~~~~~i~~~~g~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~Li~~~L~~dP~~R~t~~e~l~ 419 (492)
.+..+....+... ... ..+..++.++.+||.+||+.||.+|||+.|+++
T Consensus 236 ~~~~~~~~~~~~~-------------------~~~---------~~~~~~~~~l~~li~~~l~~~p~~Rpt~~el~~ 284 (288)
T cd05050 236 MAHEEVIYYVRDG-------------------NVL---------SCPDNCPLELYNLMRLCWSKLPSDRPSFASINR 284 (288)
T ss_pred CCHHHHHHHHhcC-------------------CCC---------CCCCCCCHHHHHHHHHHcccCcccCCCHHHHHH
Confidence 7665544433220 000 012346789999999999999999999999874
No 350
>cd05040 PTKc_Ack_like Catalytic domain of the Protein Tyrosine Kinase, Activated Cdc42-associated kinase. Protein Tyrosine Kinase (PTK) family; Activated Cdc42-associated kinase (Ack) subfamily; catalytic (c) domain. Ack subfamily members include Ack1, thirty-eight-negative kinase 1 (Tnk1), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ack subfamily members are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal catalytic domain, an SH3 domain, a Cdc42-binding CRIB domain, and a proline-rich region. They are mainly expressed in brain and skeletal tissues and are involved in the regulation of cell adhesion and growth, receptor degradation, and axonal guidance. Ack1 is also associated with and
Probab=100.00 E-value=2.1e-37 Score=298.39 Aligned_cols=239 Identities=26% Similarity=0.343 Sum_probs=187.6
Q ss_pred eeeccCCceEEEEEEEcC-CCC--EEEEEEeccchh-----hHHHHHHHHHHcCCCCccccceeeeeccCCCceEEEEEe
Q 011138 143 RVVGTGSFGVVFQAKCLE-TGD--SVAIKKVLQDKR-----YKNRELQIMRLLNHPNVVSLKHCFFSTTEKDELYLNLVL 214 (492)
Q Consensus 143 ~~lG~G~fg~Vy~~~~~~-~g~--~vAiK~~~~~~~-----~~~~E~~il~~l~h~nIv~l~~~~~~~~~~~~~~~~lV~ 214 (492)
+.||+|+||.||+|.+.. .+. .||||.+..... ...+|+.+++.++||||+++++.+. + ...++||
T Consensus 1 ~~ig~g~~~~v~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~-----~-~~~~~v~ 74 (257)
T cd05040 1 KKLGDGSFGVVRRGEWSTSGGKVIPVAVKCLKSDKLSDIMDDFLKEAAIMHSLDHENLIRLYGVVL-----T-HPLMMVT 74 (257)
T ss_pred CcCCccCcccEEeeeEecCCCCceEEEEeecCCcccHHHHHHHHHHHHHHhhcCCCCccceeEEEc-----C-CeEEEEE
Confidence 368999999999999865 333 699998865433 3457999999999999999999874 3 4688999
Q ss_pred eechh-hHHHHhhhhhhcCCCcCHHHHHHHHHHHHHHHHHHHhhCCcccCCCCCCceEEcCCCCcEEEeeecCccccCCC
Q 011138 215 EYISE-TVYRVSKHYTRMNQHVPILYVQLYTYQICRALNYLHHVVGVCHRDIKPQNLLVNPHTHQLKICDFGSAKMLVPG 293 (492)
Q Consensus 215 E~~~~-~l~~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~yLH~~~givHrDlKp~NILl~~~~~~vkL~DFG~a~~~~~~ 293 (492)
||+.+ .+...+..... ..+++..+..++.||+.||.|||+ +|++||||||+||+++.++ .+||+|||+++.....
T Consensus 75 e~~~~~~L~~~l~~~~~--~~~~~~~~~~~~~qi~~~L~~lH~-~~i~H~di~p~nil~~~~~-~~kl~dfg~~~~~~~~ 150 (257)
T cd05040 75 ELAPLGSLLDRLRKDAL--GHFLISTLCDYAVQIANGMRYLES-KRFIHRDLAARNILLASDD-KVKIGDFGLMRALPQN 150 (257)
T ss_pred EecCCCcHHHHHHhccc--ccCcHHHHHHHHHHHHHHHHHHHh-CCccccccCcccEEEecCC-EEEecccccccccccc
Confidence 99975 45544433211 468899999999999999999997 9999999999999999887 8999999999876432
Q ss_pred CC----CccceeccCccCchhhcCCCCCCcchhhHHHHHHHHHHHh-CCCCCCCCChHHHHHHHHHHhCCCCHHHHhhcC
Q 011138 294 EP----NISYICSRYYRAPELIFGATEYTTAIDMWSIGCVLAELLL-GQPLFPGESGVDQLVEIIKILGTPTREEIKCMN 368 (492)
Q Consensus 294 ~~----~~~~~gt~~y~aPE~~~~~~~~~~~~DvwSlGvil~ell~-G~~pf~~~~~~~~~~~i~~~~g~p~~~~~~~~~ 368 (492)
.. .....++..|+|||.+.+. .++.++|||||||++|+|++ |..||...+..+....+....
T Consensus 151 ~~~~~~~~~~~~~~~y~~pE~~~~~-~~~~~~Di~slG~~l~el~t~g~~p~~~~~~~~~~~~~~~~~------------ 217 (257)
T cd05040 151 EDHYVMEEHLKVPFAWCAPESLRTR-TFSHASDVWMFGVTLWEMFTYGEEPWAGLSGSQILKKIDKEG------------ 217 (257)
T ss_pred ccceecccCCCCCceecCHHHhccc-CcCchhhhHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHhcC------------
Confidence 21 1124567789999998654 48999999999999999998 999998777666555443210
Q ss_pred CCCcccCCCcccCCCcccccCCCCChhHhhhhccccccCCCCcCCHHHhhC
Q 011138 369 PNYTEFKFPQIKAHPWHKIFHKRMPPEALDLVSRLLQYSPSLRCTALEACA 419 (492)
Q Consensus 369 ~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~Li~~~L~~dP~~R~t~~e~l~ 419 (492)
.... .+..++..+.+|+.+||..+|.+||++.++++
T Consensus 218 ---~~~~------------~~~~~~~~~~~li~~~l~~~p~~Rps~~~~~~ 253 (257)
T cd05040 218 ---ERLE------------RPEACPQDIYNVMLQCWAHNPADRPTFAALRE 253 (257)
T ss_pred ---CcCC------------CCccCCHHHHHHHHHHCCCCcccCCCHHHHHH
Confidence 0000 11246789999999999999999999999875
No 351
>cd05078 PTK_Jak2_Jak3_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinases, Janus kinases 2 and 3. Protein Tyrosine Kinase (PTK) family; Janus kinase 2 (Jak2) and Jak3; pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak2 and Jak3 are members of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity
Probab=100.00 E-value=3.1e-38 Score=304.77 Aligned_cols=236 Identities=19% Similarity=0.271 Sum_probs=180.3
Q ss_pred eeccCCceEEEEEEEcCCCCE-------EEEEEeccch----hhHHHHHHHHHHcCCCCccccceeeeeccCCCceEEEE
Q 011138 144 VVGTGSFGVVFQAKCLETGDS-------VAIKKVLQDK----RYKNRELQIMRLLNHPNVVSLKHCFFSTTEKDELYLNL 212 (492)
Q Consensus 144 ~lG~G~fg~Vy~~~~~~~g~~-------vAiK~~~~~~----~~~~~E~~il~~l~h~nIv~l~~~~~~~~~~~~~~~~l 212 (492)
.||+|+||.||+|.+..++.. ||+|.+.... ....+|+.+++.++||||+++++++... ...++
T Consensus 2 ~lg~G~~~~Vy~~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~e~~~l~~~~h~~iv~~~~~~~~~-----~~~~l 76 (258)
T cd05078 2 SLGQGTFTKIFKGIRREVGDYGELHKTEVLLKVLDKSHRNYSESFFEAASMMSQLSHKHLVLNYGVCVCG-----DESIM 76 (258)
T ss_pred CCCcccchhheeeeecccccccccccchhhHHhhcchhHHHHHHHHHHHHHHHhCCCCChhheeeEEEeC-----CCcEE
Confidence 599999999999998665543 8888775432 2345789999999999999999988543 34789
Q ss_pred EeeechhhHHHHhhhhhhcCCCcCHHHHHHHHHHHHHHHHHHHhhCCcccCCCCCCceEEcCCCCc-------EEEeeec
Q 011138 213 VLEYISETVYRVSKHYTRMNQHVPILYVQLYTYQICRALNYLHHVVGVCHRDIKPQNLLVNPHTHQ-------LKICDFG 285 (492)
Q Consensus 213 V~E~~~~~l~~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~yLH~~~givHrDlKp~NILl~~~~~~-------vkL~DFG 285 (492)
||||+.++.+.... ......+++..+..++.||+.||.|||+ +||+||||||+|||++.++.. ++++|||
T Consensus 77 v~e~~~~g~L~~~l--~~~~~~~~~~~~~~~~~qi~~~l~~lH~-~~iiH~dlkp~nili~~~~~~~~~~~~~~~l~d~g 153 (258)
T cd05078 77 VQEYVKFGSLDTYL--KKNKNLINISWKLEVAKQLAWALHFLED-KGLTHGNVCAKNVLLIREEDRKTGNPPFIKLSDPG 153 (258)
T ss_pred EEecCCCCcHHHHH--hcCCCCCCHHHHHHHHHHHHHHHHHHHH-CCeecCCCccceEEEecccccccCCCceEEecccc
Confidence 99999876443222 1223467888899999999999999997 999999999999999876532 7999999
Q ss_pred CccccCCCCCCccceeccCccCchhhcCCCCCCcchhhHHHHHHHHHHHhC-CCCCCCCChHHHHHHHHHHhCCCCHHHH
Q 011138 286 SAKMLVPGEPNISYICSRYYRAPELIFGATEYTTAIDMWSIGCVLAELLLG-QPLFPGESGVDQLVEIIKILGTPTREEI 364 (492)
Q Consensus 286 ~a~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DvwSlGvil~ell~G-~~pf~~~~~~~~~~~i~~~~g~p~~~~~ 364 (492)
++..... .....+++.|+|||++.+...++.++|||||||++|+|++| .+||...+...... ...
T Consensus 154 ~~~~~~~---~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~~l~~l~~g~~~~~~~~~~~~~~~-~~~---------- 219 (258)
T cd05078 154 ISITVLP---KEILLERIPWVPPECIENPQNLSLAADKWSFGTTLWEIFSGGDKPLSALDSQKKLQ-FYE---------- 219 (258)
T ss_pred cccccCC---chhccccCCccCchhccCCCCCCchhhHHHHHHHHHHHHcCCCCChhhccHHHHHH-HHH----------
Confidence 9865432 22456788999999997655689999999999999999998 56666554433221 111
Q ss_pred hhcCCCCcccCCCcccCCCcccccCCCCChhHhhhhccccccCCCCcCCHHHhhCC
Q 011138 365 KCMNPNYTEFKFPQIKAHPWHKIFHKRMPPEALDLVSRLLQYSPSLRCTALEACAH 420 (492)
Q Consensus 365 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~Li~~~L~~dP~~R~t~~e~l~H 420 (492)
.... ++...+.++.+||.+||+.||++|||+.++++.
T Consensus 220 -------~~~~------------~~~~~~~~~~~li~~~l~~~p~~Rps~~~il~~ 256 (258)
T cd05078 220 -------DRHQ------------LPAPKWTELANLINQCMDYEPDFRPSFRAIIRD 256 (258)
T ss_pred -------cccc------------CCCCCcHHHHHHHHHHhccChhhCCCHHHHHHh
Confidence 0011 112356789999999999999999999999863
No 352
>cd05111 PTK_HER3 Pseudokinase domain of the Protein Tyrosine Kinase, HER3. Protein Tyrosine Kinase (PTK) family; HER3 (ErbB3); pseudokinase domain. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER3 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr r
Probab=100.00 E-value=1.1e-37 Score=304.57 Aligned_cols=243 Identities=21% Similarity=0.312 Sum_probs=186.2
Q ss_pred cceeEeeeeccCCceEEEEEEEcCCCCE----EEEEEeccch-----hhHHHHHHHHHHcCCCCccccceeeeeccCCCc
Q 011138 137 ISYMAERVVGTGSFGVVFQAKCLETGDS----VAIKKVLQDK-----RYKNRELQIMRLLNHPNVVSLKHCFFSTTEKDE 207 (492)
Q Consensus 137 ~~y~~~~~lG~G~fg~Vy~~~~~~~g~~----vAiK~~~~~~-----~~~~~E~~il~~l~h~nIv~l~~~~~~~~~~~~ 207 (492)
.+|++.+.||+|+||.||+|.+..+|+. |++|.+.... .....|+.+++.++||||+++++++. +.
T Consensus 7 ~~~~~~~~lg~G~~~~vy~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~l~~l~h~~iv~~~~~~~-----~~ 81 (279)
T cd05111 7 TELRKLKLLGSGVFGTVHKGIWIPEGDSIKIPVAIKTIQDRSGRQTFQEITDHMLAMGSLDHAYIVRLLGICP-----GA 81 (279)
T ss_pred hhceeccccCccCCcceEEEEEcCCCCceeeEEEEeecccccchHHHHHHHHHHHHHhcCCCCCcceEEEEEC-----CC
Confidence 3688999999999999999999888774 7777764321 22345777889999999999999762 22
Q ss_pred eEEEEEeeechh-hHHHHhhhhhhcCCCcCHHHHHHHHHHHHHHHHHHHhhCCcccCCCCCCceEEcCCCCcEEEeeecC
Q 011138 208 LYLNLVLEYISE-TVYRVSKHYTRMNQHVPILYVQLYTYQICRALNYLHHVVGVCHRDIKPQNLLVNPHTHQLKICDFGS 286 (492)
Q Consensus 208 ~~~~lV~E~~~~-~l~~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~yLH~~~givHrDlKp~NILl~~~~~~vkL~DFG~ 286 (492)
..++|+||+.+ ++.+.+. .....+++..+..++.||+.||.|||+ +|++||||||+|||++.++ .+||+|||+
T Consensus 82 -~~~~i~e~~~~gsL~~~l~---~~~~~~~~~~~~~i~~qi~~~l~~lH~-~~iiH~dlkp~nili~~~~-~~kl~Dfg~ 155 (279)
T cd05111 82 -SLQLVTQLSPLGSLLDHVR---QHRDSLDPQRLLNWCVQIAKGMYYLEE-HRMVHRNLAARNILLKSDS-IVQIADFGV 155 (279)
T ss_pred -ccEEEEEeCCCCcHHHHHH---hcccCCCHHHHHHHHHHHHHHHHHHHH-CCEeccccCcceEEEcCCC-cEEEcCCcc
Confidence 36689999985 4544432 223568899999999999999999997 9999999999999999877 799999999
Q ss_pred ccccCCCCC---CccceeccCccCchhhcCCCCCCcchhhHHHHHHHHHHHh-CCCCCCCCChHHHHHHHHHHhCCCCHH
Q 011138 287 AKMLVPGEP---NISYICSRYYRAPELIFGATEYTTAIDMWSIGCVLAELLL-GQPLFPGESGVDQLVEIIKILGTPTRE 362 (492)
Q Consensus 287 a~~~~~~~~---~~~~~gt~~y~aPE~~~~~~~~~~~~DvwSlGvil~ell~-G~~pf~~~~~~~~~~~i~~~~g~p~~~ 362 (492)
++....... .....++..|+|||.+.+. .++.++|||||||++|||++ |..||.+..... +.+++... .
T Consensus 156 ~~~~~~~~~~~~~~~~~~~~~y~~pE~~~~~-~~~~~~Dv~slG~il~el~t~g~~p~~~~~~~~-~~~~~~~~-~---- 228 (279)
T cd05111 156 ADLLYPDDKKYFYSEHKTPIKWMALESILFG-RYTHQSDVWSYGVTVWEMMSYGAEPYAGMRPHE-VPDLLEKG-E---- 228 (279)
T ss_pred ceeccCCCcccccCCCCCcccccCHHHhccC-CcCchhhHHHHHHHHHHHHcCCCCCCCCCCHHH-HHHHHHCC-C----
Confidence 986543322 1234567789999998654 48999999999999999998 999998765433 22222210 0
Q ss_pred HHhhcCCCCcccCCCcccCCCcccccCCCCChhHhhhhccccccCCCCcCCHHHhhC
Q 011138 363 EIKCMNPNYTEFKFPQIKAHPWHKIFHKRMPPEALDLVSRLLQYSPSLRCTALEACA 419 (492)
Q Consensus 363 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~Li~~~L~~dP~~R~t~~e~l~ 419 (492)
... .+...+.++.+++.+||..||++|||+.++++
T Consensus 229 ----------~~~------------~~~~~~~~~~~li~~c~~~~p~~Rps~~el~~ 263 (279)
T cd05111 229 ----------RLA------------QPQICTIDVYMVMVKCWMIDENVRPTFKELAN 263 (279)
T ss_pred ----------cCC------------CCCCCCHHHHHHHHHHcCCCcccCcCHHHHHH
Confidence 000 01234678899999999999999999999876
No 353
>cd05042 PTKc_Aatyk Catalytic domain of the Protein Tyrosine Kinases, Apoptosis-associated tyrosine kinases. Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase (Aatyk) subfamily; catalytic (c) domain. The Aatyk subfamily is also referred to as the lemur tyrosine kinase (Lmtk) subfamily. It consists of Aatyk1 (Lmtk1), Aatyk2 (Lmtk2, Brek), Aatyk3 (Lmtk3), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk proteins are mostly receptor tyr kinases (RTKs) containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk1 does not contain a transmembrane segment and is a cytoplasmic (or nonreceptor) kinase. Aatyk proteins are classified as tyr kina
Probab=100.00 E-value=2e-37 Score=300.91 Aligned_cols=245 Identities=22% Similarity=0.296 Sum_probs=181.5
Q ss_pred eeccCCceEEEEEEEcC--CCCEEEEEEeccch-----hhHHHHHHHHHHcCCCCccccceeeeeccCCCceEEEEEeee
Q 011138 144 VVGTGSFGVVFQAKCLE--TGDSVAIKKVLQDK-----RYKNRELQIMRLLNHPNVVSLKHCFFSTTEKDELYLNLVLEY 216 (492)
Q Consensus 144 ~lG~G~fg~Vy~~~~~~--~g~~vAiK~~~~~~-----~~~~~E~~il~~l~h~nIv~l~~~~~~~~~~~~~~~~lV~E~ 216 (492)
.||+|+||.||+|.... ....+|+|.+.... ..+.+|+.+++.++|+||+++++.+ .....+|+||||
T Consensus 2 ~lg~G~fg~v~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~e~~~~~~l~h~nii~~~~~~-----~~~~~~~lv~e~ 76 (269)
T cd05042 2 EIGNGWFGKVLLGEAHRGMSKARVVVKELRASATPDEQLLFLQEVQPYRELNHPNVLQCLGQC-----IESIPYLLVLEF 76 (269)
T ss_pred cCCccCCceEEEEEEecCCCCeEEEEeecCccCChHHHHHHHHHHHHHHhCCCCCcceEEEEE-----CCCCceEEEEEe
Confidence 59999999999996533 34578888764321 2345799999999999999999988 334458899999
Q ss_pred chh-hHHHHhhhhhh-cCCCcCHHHHHHHHHHHHHHHHHHHhhCCcccCCCCCCceEEcCCCCcEEEeeecCccccCCCC
Q 011138 217 ISE-TVYRVSKHYTR-MNQHVPILYVQLYTYQICRALNYLHHVVGVCHRDIKPQNLLVNPHTHQLKICDFGSAKMLVPGE 294 (492)
Q Consensus 217 ~~~-~l~~~~~~~~~-~~~~~~~~~~~~i~~qi~~aL~yLH~~~givHrDlKp~NILl~~~~~~vkL~DFG~a~~~~~~~ 294 (492)
+++ ++.+.+..... .....++..+..++.||+.||.|||+ +||+||||||+|||++.++ .+||+|||++.......
T Consensus 77 ~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~-~~ivH~dlkp~Nill~~~~-~~kl~dfg~~~~~~~~~ 154 (269)
T cd05042 77 CPLGDLKNYLRSNRGMVAQMAQKDVLQRMACEVASGLLWLHQ-ADFIHSDLALRNCQLTADL-SVKIGDYGLALEQYPED 154 (269)
T ss_pred CCCCcHHHHHHhccccccccccHHHHHHHHHHHHHHHHHHHh-cCEecccccHhheEecCCC-cEEEeccccccccccch
Confidence 986 44444433221 12334677788999999999999997 9999999999999999887 89999999986543221
Q ss_pred C---CccceeccCccCchhhcC------CCCCCcchhhHHHHHHHHHHHh-CCCCCCCCChHHHHHHHHHHhCCCCHHHH
Q 011138 295 P---NISYICSRYYRAPELIFG------ATEYTTAIDMWSIGCVLAELLL-GQPLFPGESGVDQLVEIIKILGTPTREEI 364 (492)
Q Consensus 295 ~---~~~~~gt~~y~aPE~~~~------~~~~~~~~DvwSlGvil~ell~-G~~pf~~~~~~~~~~~i~~~~g~p~~~~~ 364 (492)
. .....+++.|+|||++.. ...++.++|||||||++|||++ |..||....+.+.+..+.....
T Consensus 155 ~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~~~DiwslG~~l~el~~~~~~p~~~~~~~~~~~~~~~~~~------- 227 (269)
T cd05042 155 YYITKDCHAVPLRWLAPELVEIRGQDLLPKDQTKKSNIWSLGVTMWELFTAADQPYPDLSDEQVLKQVVREQD------- 227 (269)
T ss_pred heeccCCCCCcccccCHHHHhhccccccccccchhhHHHHHHHHHHHHHhCCCCCCCcCCHHHHHHHHhhccC-------
Confidence 1 122345678999999743 2346889999999999999998 8899988776665555433211
Q ss_pred hhcCCCCcccCCCcccCCCcccccCCCCChhHhhhhccccccCCCCcCCHHHhhC
Q 011138 365 KCMNPNYTEFKFPQIKAHPWHKIFHKRMPPEALDLVSRLLQYSPSLRCTALEACA 419 (492)
Q Consensus 365 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~Li~~~L~~dP~~R~t~~e~l~ 419 (492)
..++. ......+++.+.+++..|+ .||++|||+.+++.
T Consensus 228 ---------~~~~~-------~~~~~~~~~~~~~~~~~~~-~dp~~Rpt~~~v~~ 265 (269)
T cd05042 228 ---------IKLPK-------PQLDLKYSDRWYEVMQFCW-LDPETRPTAEEVHE 265 (269)
T ss_pred ---------ccCCC-------CcccccCCHHHHHHHHHHh-cCcccccCHHHHHH
Confidence 11111 0122357888999999998 59999999999875
No 354
>cd05081 PTKc_Jak2_Jak3_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinases, Janus kinases 2 and 3. Protein Tyrosine Kinase (PTK) family; Janus kinase 2 (Jak2) and Jak3; catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak2 and Jak3 are members of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal catalytic tyr kinase domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as th
Probab=100.00 E-value=1.4e-37 Score=304.38 Aligned_cols=256 Identities=26% Similarity=0.405 Sum_probs=187.6
Q ss_pred ceeEeeeeccCCceEEEEEE----EcCCCCEEEEEEeccch----hhHHHHHHHHHHcCCCCccccceeeeeccCCCceE
Q 011138 138 SYMAERVVGTGSFGVVFQAK----CLETGDSVAIKKVLQDK----RYKNRELQIMRLLNHPNVVSLKHCFFSTTEKDELY 209 (492)
Q Consensus 138 ~y~~~~~lG~G~fg~Vy~~~----~~~~g~~vAiK~~~~~~----~~~~~E~~il~~l~h~nIv~l~~~~~~~~~~~~~~ 209 (492)
+|.+.+.||+|+||.||+|. +..++..||||.+.... ..+.+|+++++.++||||++++++++.. +...
T Consensus 5 ~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~---~~~~ 81 (284)
T cd05081 5 HLKFIQQLGKGNFGSVELCRYDPLQDNTGEVVAVKKLQHSTAEHLRDFEREIEILKSLQHDNIVKYKGVCYSA---GRRN 81 (284)
T ss_pred cceeeeeccCCCCceEEEEEecCCcCCCCcEEEEEEeccCCHHHHHHHHHHHHHHHhCCCCCeeEEEEEEccC---CCCc
Confidence 58899999999999999997 44678999999985432 2456899999999999999999876543 2335
Q ss_pred EEEEeeechh-hHHHHhhhhhhcCCCcCHHHHHHHHHHHHHHHHHHHhhCCcccCCCCCCceEEcCCCCcEEEeeecCcc
Q 011138 210 LNLVLEYISE-TVYRVSKHYTRMNQHVPILYVQLYTYQICRALNYLHHVVGVCHRDIKPQNLLVNPHTHQLKICDFGSAK 288 (492)
Q Consensus 210 ~~lV~E~~~~-~l~~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~yLH~~~givHrDlKp~NILl~~~~~~vkL~DFG~a~ 288 (492)
+++||||+++ ++...+.. ....+++..+..++.||+.||.|||+ +||+||||||+||+++.++ .+||+|||++.
T Consensus 82 ~~lv~e~~~~~~L~~~l~~---~~~~l~~~~~~~~~~~l~~aL~~LH~-~~i~H~dlkp~nili~~~~-~~~l~dfg~~~ 156 (284)
T cd05081 82 LRLVMEYLPYGSLRDYLQK---HRERLDHRKLLLYASQICKGMEYLGS-KRYVHRDLATRNILVESEN-RVKIGDFGLTK 156 (284)
T ss_pred eEEEEEecCCCCHHHHHHh---cCcCCCHHHHHHHHHHHHHHHHHHHH-CCceeccCCHhhEEECCCC-eEEECCCcccc
Confidence 7899999975 45444322 23457889999999999999999997 9999999999999999887 79999999998
Q ss_pred ccCCCCCC----ccceeccCccCchhhcCCCCCCcchhhHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCCH---
Q 011138 289 MLVPGEPN----ISYICSRYYRAPELIFGATEYTTAIDMWSIGCVLAELLLGQPLFPGESGVDQLVEIIKILGTPTR--- 361 (492)
Q Consensus 289 ~~~~~~~~----~~~~gt~~y~aPE~~~~~~~~~~~~DvwSlGvil~ell~G~~pf~~~~~~~~~~~i~~~~g~p~~--- 361 (492)
........ ....++..|+|||++.+. .++.++|||||||++|||++|..++...... . ....+....
T Consensus 157 ~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~-~~~~~~Di~slG~~l~el~~~~~~~~~~~~~--~---~~~~~~~~~~~~ 230 (284)
T cd05081 157 VLPQDKEYYKVREPGESPIFWYAPESLTES-KFSVASDVWSFGVVLYELFTYSDKSCSPPAE--F---MRMMGNDKQGQM 230 (284)
T ss_pred cccCCCcceeecCCCCCceEeeCHHHhccC-CcChHHHHHHHHHHHHHHhhcCCcCCCcchh--h---hhhccccccccc
Confidence 76433221 112234569999998654 4899999999999999999998776543211 1 111111000
Q ss_pred --HHHhhcCCCCcccCCCcccCCCcccccCCCCChhHhhhhccccccCCCCcCCHHHhhC
Q 011138 362 --EEIKCMNPNYTEFKFPQIKAHPWHKIFHKRMPPEALDLVSRLLQYSPSLRCTALEACA 419 (492)
Q Consensus 362 --~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~Li~~~L~~dP~~R~t~~e~l~ 419 (492)
..+..... ....++ .+..++.++.+||.+||..||++|||+.++++
T Consensus 231 ~~~~~~~~~~--~~~~~~----------~~~~~~~~~~~li~~cl~~~p~~Rpt~~ei~~ 278 (284)
T cd05081 231 IVYHLIELLK--NNGRLP----------APPGCPAEIYAIMKECWNNDPSQRPSFSELAL 278 (284)
T ss_pred chHHHHHHHh--cCCcCC----------CCCCCCHHHHHHHHHHccCChhhCCCHHHHHH
Confidence 00000000 000011 12457889999999999999999999999975
No 355
>cd05112 PTKc_Itk Catalytic domain of the Protein Tyrosine Kinase, Interleukin-2-inducible T-cell Kinase. Protein Tyrosine Kinase (PTK) family; Interleukin-2 (IL-2)-inducible T-cell kinase (Itk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Itk (also known as Tsk or Emt) is a member of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds the products of PI3K and allows membrane recruitment and activ
Probab=100.00 E-value=2.8e-37 Score=297.31 Aligned_cols=244 Identities=20% Similarity=0.322 Sum_probs=191.1
Q ss_pred ceeEeeeeccCCceEEEEEEEcCCCCEEEEEEeccc---hhhHHHHHHHHHHcCCCCccccceeeeeccCCCceEEEEEe
Q 011138 138 SYMAERVVGTGSFGVVFQAKCLETGDSVAIKKVLQD---KRYKNRELQIMRLLNHPNVVSLKHCFFSTTEKDELYLNLVL 214 (492)
Q Consensus 138 ~y~~~~~lG~G~fg~Vy~~~~~~~g~~vAiK~~~~~---~~~~~~E~~il~~l~h~nIv~l~~~~~~~~~~~~~~~~lV~ 214 (492)
.|.+.+.||+|+||.||+|.+. ++..+|+|.+... .....+|+++++.++||||+++++++ ....+.++||
T Consensus 5 ~~~~~~~ig~g~~g~v~~~~~~-~~~~~~~k~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~-----~~~~~~~~v~ 78 (256)
T cd05112 5 ELTLVQEIGSGQFGLVWLGYWL-EKRKVAIKTIREGAMSEEDFIEEAQVMMKLSHPKLVQLYGVC-----TERSPICLVF 78 (256)
T ss_pred HeEEEeeecCcccceEEEEEEe-CCCeEEEEECCCCCCCHHHHHHHHHHHHhCCCCCeeeEEEEE-----ccCCceEEEE
Confidence 5889999999999999999875 4778999988643 23456799999999999999999987 4444689999
Q ss_pred eechhhHHHHhhhhhhcCCCcCHHHHHHHHHHHHHHHHHHHhhCCcccCCCCCCceEEcCCCCcEEEeeecCccccCCCC
Q 011138 215 EYISETVYRVSKHYTRMNQHVPILYVQLYTYQICRALNYLHHVVGVCHRDIKPQNLLVNPHTHQLKICDFGSAKMLVPGE 294 (492)
Q Consensus 215 E~~~~~l~~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~yLH~~~givHrDlKp~NILl~~~~~~vkL~DFG~a~~~~~~~ 294 (492)
||+.++.+.... ......+++..+..++.|++.||.|||+ .|++||||||+||+++.++ .+||+|||++.......
T Consensus 79 e~~~~~~L~~~~--~~~~~~~~~~~~~~~~~~l~~~l~~lH~-~~i~h~dl~p~ni~i~~~~-~~~l~d~g~~~~~~~~~ 154 (256)
T cd05112 79 EFMEHGCLSDYL--RAQRGKFSQETLLGMCLDVCEGMAYLES-SNVIHRDLAARNCLVGENQ-VVKVSDFGMTRFVLDDQ 154 (256)
T ss_pred EcCCCCcHHHHH--HhCccCCCHHHHHHHHHHHHHHHHHHHH-CCccccccccceEEEcCCC-eEEECCCcceeecccCc
Confidence 999876443221 2223457888899999999999999997 9999999999999999777 79999999987553221
Q ss_pred C--CccceeccCccCchhhcCCCCCCcchhhHHHHHHHHHHHh-CCCCCCCCChHHHHHHHHHHhCCCCHHHHhhcCCCC
Q 011138 295 P--NISYICSRYYRAPELIFGATEYTTAIDMWSIGCVLAELLL-GQPLFPGESGVDQLVEIIKILGTPTREEIKCMNPNY 371 (492)
Q Consensus 295 ~--~~~~~gt~~y~aPE~~~~~~~~~~~~DvwSlGvil~ell~-G~~pf~~~~~~~~~~~i~~~~g~p~~~~~~~~~~~~ 371 (492)
. .....++..|+|||.+.+. .++.++|||||||++|+|++ |..||......+.+..+.+..
T Consensus 155 ~~~~~~~~~~~~~~aPe~~~~~-~~~~~~Dv~slG~~l~el~~~g~~p~~~~~~~~~~~~~~~~~--------------- 218 (256)
T cd05112 155 YTSSTGTKFPVKWSSPEVFSFS-KYSSKSDVWSFGVLMWEVFSEGKTPYENRSNSEVVETINAGF--------------- 218 (256)
T ss_pred ccccCCCccchhhcCHhHhccC-CcChHHHHHHHHHHHHHHHcCCCCCCCcCCHHHHHHHHhCCC---------------
Confidence 1 1123346789999998654 48899999999999999998 999998776555444432100
Q ss_pred cccCCCcccCCCcccccCCCCChhHhhhhccccccCCCCcCCHHHhhCC
Q 011138 372 TEFKFPQIKAHPWHKIFHKRMPPEALDLVSRLLQYSPSLRCTALEACAH 420 (492)
Q Consensus 372 ~~~~~~~~~~~~~~~~~~~~~s~~~~~Li~~~L~~dP~~R~t~~e~l~H 420 (492)
.. ..+...+.++.+|+.+||+.||++||++.+++++
T Consensus 219 ---~~----------~~~~~~~~~~~~l~~~~l~~~p~~Rp~~~~~l~~ 254 (256)
T cd05112 219 ---RL----------YKPRLASQSVYELMQHCWKERPEDRPSFSLLLHQ 254 (256)
T ss_pred ---CC----------CCCCCCCHHHHHHHHHHcccChhhCCCHHHHHHh
Confidence 00 0112357899999999999999999999999863
No 356
>cd05076 PTK_Tyk2_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinase, Tyrosine kinase 2. Protein Tyrosine Kinase (PTK) family; Tyrosine kinase 2 (Tyk2); pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyk2 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity of the C-terminal catalyt
Probab=100.00 E-value=1.1e-37 Score=304.01 Aligned_cols=236 Identities=18% Similarity=0.225 Sum_probs=179.3
Q ss_pred eeccCCceEEEEEEEcCC------------------------CCEEEEEEeccch----hhHHHHHHHHHHcCCCCcccc
Q 011138 144 VVGTGSFGVVFQAKCLET------------------------GDSVAIKKVLQDK----RYKNRELQIMRLLNHPNVVSL 195 (492)
Q Consensus 144 ~lG~G~fg~Vy~~~~~~~------------------------g~~vAiK~~~~~~----~~~~~E~~il~~l~h~nIv~l 195 (492)
.||+|+||.||+|....+ ...||+|.+.... ..+.+|+.+++.++||||+++
T Consensus 2 ~lG~G~~~~vy~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~k~~~~~~~~~~~~~~~~~~~~~~l~h~niv~~ 81 (274)
T cd05076 2 HLGQGTRTNIYDGRLRVEGGGEPEEDEMEDEDPLVEGNNNGRELRVVLKVLDPSHRDIALAFFETASLMSQVSHIHLAFV 81 (274)
T ss_pred CcCcccccceecceeEeccCCCCcccccccccccccccCCCeeeeEEEEecChHHHHHHHHHHHHHHHHhcCCCCCeeeE
Confidence 599999999999975322 2358888875432 234468889999999999999
Q ss_pred ceeeeeccCCCceEEEEEeeechhhHHHHhhhhhhcCCCcCHHHHHHHHHHHHHHHHHHHhhCCcccCCCCCCceEEcCC
Q 011138 196 KHCFFSTTEKDELYLNLVLEYISETVYRVSKHYTRMNQHVPILYVQLYTYQICRALNYLHHVVGVCHRDIKPQNLLVNPH 275 (492)
Q Consensus 196 ~~~~~~~~~~~~~~~~lV~E~~~~~l~~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~yLH~~~givHrDlKp~NILl~~~ 275 (492)
++++.. ..+.++||||++++.+.... ......+++..+..++.||+.||+|||+ +||+||||||+|||++..
T Consensus 82 ~~~~~~-----~~~~~lv~ey~~~g~L~~~l--~~~~~~~~~~~~~~i~~qi~~~l~~lH~-~~iiH~dlkp~Nill~~~ 153 (274)
T cd05076 82 HGVCVR-----GSENIMVEEFVEHGPLDVCL--RKEKGRVPVAWKITVAQQLASALSYLED-KNLVHGNVCAKNILLARL 153 (274)
T ss_pred EEEEEe-----CCceEEEEecCCCCcHHHHH--HhcCCCCCHHHHHHHHHHHHHHHHHHHc-CCccCCCCCcccEEEecc
Confidence 998843 33578999999987554332 2224568899999999999999999997 999999999999999754
Q ss_pred C------CcEEEeeecCccccCCCCCCccceeccCccCchhhcCCCCCCcchhhHHHHHHHHHHH-hCCCCCCCCChHHH
Q 011138 276 T------HQLKICDFGSAKMLVPGEPNISYICSRYYRAPELIFGATEYTTAIDMWSIGCVLAELL-LGQPLFPGESGVDQ 348 (492)
Q Consensus 276 ~------~~vkL~DFG~a~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DvwSlGvil~ell-~G~~pf~~~~~~~~ 348 (492)
+ ..+||+|||++...... ....++..|+|||.+.+...++.++|||||||++|||+ +|..||......+.
T Consensus 154 ~~~~~~~~~~kl~d~g~~~~~~~~---~~~~~~~~~~aPe~~~~~~~~~~~~Dv~slG~~l~el~~~g~~p~~~~~~~~~ 230 (274)
T cd05076 154 GLAEGTSPFIKLSDPGVSFTALSR---EERVERIPWIAPECVPGGNSLSTAADKWSFGTTLLEICFDGEVPLKERTPSEK 230 (274)
T ss_pred CcccCccceeeecCCccccccccc---cccccCCcccCchhhcCCCCCCcHHHHHHHHHHHHHHHhCCCCCccccChHHH
Confidence 3 13899999988644222 23457888999999876566899999999999999995 69999987654332
Q ss_pred HHHHHHHhCCCCHHHHhhcCCCCcccCCCcccCCCcccccCCCCChhHhhhhccccccCCCCcCCHHHhhCC
Q 011138 349 LVEIIKILGTPTREEIKCMNPNYTEFKFPQIKAHPWHKIFHKRMPPEALDLVSRLLQYSPSLRCTALEACAH 420 (492)
Q Consensus 349 ~~~i~~~~g~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~Li~~~L~~dP~~R~t~~e~l~H 420 (492)
.. .... ...+ +...++++.+||.+||+.||.+|||+.+++++
T Consensus 231 ~~-~~~~-----------------~~~~------------~~~~~~~~~~li~~cl~~~p~~Rps~~~il~~ 272 (274)
T cd05076 231 ER-FYEK-----------------KHRL------------PEPSCKELATLISQCLTYEPTQRPSFRTILRD 272 (274)
T ss_pred HH-HHHh-----------------ccCC------------CCCCChHHHHHHHHHcccChhhCcCHHHHHHh
Confidence 21 1110 0011 12245789999999999999999999999864
No 357
>cd05046 PTK_CCK4 Pseudokinase domain of the Protein Tyrosine Kinase, Colon Carcinoma Kinase 4. Protein Tyrosine Kinase (PTK) family; Colon Carcinoma Kinase 4 (CCK4); pseudokinase domain. The PTKc (catalytic domain) family, to which this subfamily belongs, includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. CCK4, also called protein tyrosine kinase 7 (PTK7), is an orphan receptor tyr kinase (RTK) containing an extracellular region with seven immunoglobulin domains, a transmembrane segment, and an intracellular inactive pseudokinase domain. Studies in mice reveal that CCK4 is essential for neural development. Mouse embryos containing a truncated CCK4 die perinatally and display craniorachischisis, a severe form of neural tube defect. The mechanism of action of the CCK4 pseudokinase is s
Probab=100.00 E-value=2.7e-37 Score=300.79 Aligned_cols=249 Identities=23% Similarity=0.309 Sum_probs=192.4
Q ss_pred cceeEeeeeccCCceEEEEEEEcC-----CCCEEEEEEeccch-----hhHHHHHHHHHHcCCCCccccceeeeeccCCC
Q 011138 137 ISYMAERVVGTGSFGVVFQAKCLE-----TGDSVAIKKVLQDK-----RYKNRELQIMRLLNHPNVVSLKHCFFSTTEKD 206 (492)
Q Consensus 137 ~~y~~~~~lG~G~fg~Vy~~~~~~-----~g~~vAiK~~~~~~-----~~~~~E~~il~~l~h~nIv~l~~~~~~~~~~~ 206 (492)
.+|.+.+.||.|+||.||+|+++. +.+.|++|.+.... ....+|+.+++.++|+||+++++++ .+
T Consensus 5 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~-----~~ 79 (275)
T cd05046 5 SNLQEITTLGRGEFGEVFLAKAKGIEEEGGETLVLVKALQKTKDENLQSEFRRELDMFRKLSHKNVVRLLGLC-----RE 79 (275)
T ss_pred HhceeeeeecccceeEEEEEEeccCCcCCCcceEEEEccCCccchHHHHHHHHHHHHHHhcCCcceeeeEEEE-----CC
Confidence 368999999999999999999754 34679999875432 2356799999999999999999987 44
Q ss_pred ceEEEEEeeechh-hHHHHhhhhhhc-----CCCcCHHHHHHHHHHHHHHHHHHHhhCCcccCCCCCCceEEcCCCCcEE
Q 011138 207 ELYLNLVLEYISE-TVYRVSKHYTRM-----NQHVPILYVQLYTYQICRALNYLHHVVGVCHRDIKPQNLLVNPHTHQLK 280 (492)
Q Consensus 207 ~~~~~lV~E~~~~-~l~~~~~~~~~~-----~~~~~~~~~~~i~~qi~~aL~yLH~~~givHrDlKp~NILl~~~~~~vk 280 (492)
..+.|+||||+++ .+.+++...... ...+++..+..++.||+.||.|||+ .||+||||||+|||++.++ .++
T Consensus 80 ~~~~~lv~e~~~~~~L~~~i~~~~~~~~~~~~~~l~~~~~~~~~~~l~~~l~~LH~-~~i~H~dlkp~Nili~~~~-~~~ 157 (275)
T cd05046 80 AEPHYMILEYTDLGDLKQFLRATKSKDEKLKPPPLSTKQKVALCTQIALGMDHLSN-ARFVHRDLAARNCLVSSQR-EVK 157 (275)
T ss_pred CCcceEEEEecCCCcHHHHHHhcccccccccccCCCHHHHHHHHHHHHHHHHHhhh-cCcccCcCccceEEEeCCC-cEE
Confidence 5568999999985 454444332211 1258899999999999999999997 9999999999999999887 799
Q ss_pred EeeecCccccCCCC--CCccceeccCccCchhhcCCCCCCcchhhHHHHHHHHHHHh-CCCCCCCCChHHHHHHHHHHhC
Q 011138 281 ICDFGSAKMLVPGE--PNISYICSRYYRAPELIFGATEYTTAIDMWSIGCVLAELLL-GQPLFPGESGVDQLVEIIKILG 357 (492)
Q Consensus 281 L~DFG~a~~~~~~~--~~~~~~gt~~y~aPE~~~~~~~~~~~~DvwSlGvil~ell~-G~~pf~~~~~~~~~~~i~~~~g 357 (492)
|+|||++....... ......++..|+|||.+.+.. ++.++|||||||++|+|++ |..||........+..+..
T Consensus 158 l~~~~~~~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~-~~~~~Di~slG~~l~~l~~~~~~p~~~~~~~~~~~~~~~--- 233 (275)
T cd05046 158 VSLLSLSKDVYNSEYYKLRNALIPLRWLAPEAVQEDD-FSTKSDVWSFGVLMWEVFTQGELPFYGLSDEEVLNRLQA--- 233 (275)
T ss_pred EcccccccccCcccccccCCceeEEeecChhhhccCC-CCchhhHHHHHHHHHHHHhCCCCCccccchHHHHHHHHc---
Confidence 99999986543221 222346678899999986544 7889999999999999998 8899976655443333221
Q ss_pred CCCHHHHhhcCCCCcccCCCcccCCCcccccCCCCChhHhhhhccccccCCCCcCCHHHhhCC
Q 011138 358 TPTREEIKCMNPNYTEFKFPQIKAHPWHKIFHKRMPPEALDLVSRLLQYSPSLRCTALEACAH 420 (492)
Q Consensus 358 ~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~Li~~~L~~dP~~R~t~~e~l~H 420 (492)
....++ ....++..+.++|.+||..||.+||++.+++++
T Consensus 234 --------------~~~~~~----------~~~~~~~~l~~~i~~~l~~~p~~Rp~~~~~l~~ 272 (275)
T cd05046 234 --------------GKLELP----------VPEGCPSRLYKLMTRCWAVNPKDRPSFSELVSA 272 (275)
T ss_pred --------------CCcCCC----------CCCCCCHHHHHHHHHHcCCCcccCCCHHHHHHH
Confidence 000010 123468899999999999999999999999864
No 358
>cd08528 STKc_Nek10 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 10. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 10 (Nek10) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek10 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. No function has yet been ascribed to Nek10. The gene encoding Nek10 is a putative causative gene for breast cancer; it is located within a breast cancer susceptibility loci on chromosome 3p24.
Probab=100.00 E-value=2.3e-37 Score=300.32 Aligned_cols=249 Identities=23% Similarity=0.384 Sum_probs=194.2
Q ss_pred ceeEeeeeccCCceEEEEEEEcC-CCCEEEEEEeccch--------------hhHHHHHHHHHH-cCCCCccccceeeee
Q 011138 138 SYMAERVVGTGSFGVVFQAKCLE-TGDSVAIKKVLQDK--------------RYKNRELQIMRL-LNHPNVVSLKHCFFS 201 (492)
Q Consensus 138 ~y~~~~~lG~G~fg~Vy~~~~~~-~g~~vAiK~~~~~~--------------~~~~~E~~il~~-l~h~nIv~l~~~~~~ 201 (492)
.|.+.+.||+|+||.||+|.+.. +++.+|+|.+.... ....+|+.++.. ++||||+++++++
T Consensus 1 ~y~~~~~ig~G~~~~v~~~~~~~~~~~~~avk~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~~~~h~~i~~~~~~~-- 78 (269)
T cd08528 1 EYAVLEHLGSGAFGCVYKVRKKNNGQNLLALKEINVHNPAFGKDKRERDKSIGDIVSEVTIIKEQLRHPNIVRYYKTF-- 78 (269)
T ss_pred CchhhhhhcCCCCceEEEEEEcCCCCceeeeeEeeccccccccccccchHHHHHHHHHHHHHhhcCCCCCeeeEEeeE--
Confidence 37888999999999999999887 68899999874211 112357777764 7999999999988
Q ss_pred ccCCCceEEEEEeeechh-hHHHHhhhhhhcCCCcCHHHHHHHHHHHHHHHHHHHhhCCcccCCCCCCceEEcCCCCcEE
Q 011138 202 TTEKDELYLNLVLEYISE-TVYRVSKHYTRMNQHVPILYVQLYTYQICRALNYLHHVVGVCHRDIKPQNLLVNPHTHQLK 280 (492)
Q Consensus 202 ~~~~~~~~~~lV~E~~~~-~l~~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~yLH~~~givHrDlKp~NILl~~~~~~vk 280 (492)
.+..+.++||||+++ .+.+.+.........+++..++.++.|++.||.|||+..||+|+||||+|||++.++ .+|
T Consensus 79 ---~~~~~~~lv~e~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~~~i~H~dl~~~nil~~~~~-~~~ 154 (269)
T cd08528 79 ---LENDRLYIVMDLIEGAPLGEHFNSLKEKKQRFTEERIWNIFVQMVLALRYLHKEKRIVHRDLTPNNIMLGEDD-KVT 154 (269)
T ss_pred ---ccCCeEEEEEecCCCCcHHHHHHHHHhccCCCCHHHHHHHHHHHHHHHHHhccCCceeecCCCHHHEEECCCC-cEE
Confidence 444568999999986 454544433344567899999999999999999999426899999999999999887 799
Q ss_pred EeeecCccccCCCCCCccceeccCccCchhhcCCCCCCcchhhHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCC
Q 011138 281 ICDFGSAKMLVPGEPNISYICSRYYRAPELIFGATEYTTAIDMWSIGCVLAELLLGQPLFPGESGVDQLVEIIKILGTPT 360 (492)
Q Consensus 281 L~DFG~a~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DvwSlGvil~ell~G~~pf~~~~~~~~~~~i~~~~g~p~ 360 (492)
|+|||++.............|+..|+|||.+.+. .++.++|+|||||++|+|++|.+||...+.......+......|
T Consensus 155 l~dfg~~~~~~~~~~~~~~~~~~~~~~Pe~~~~~-~~~~~~Dv~slG~ll~~l~~g~~p~~~~~~~~~~~~~~~~~~~~- 232 (269)
T cd08528 155 ITDFGLAKQKQPESKLTSVVGTILYSCPEIVKNE-PYGEKADVWAFGCILYQMCTLQPPFYSTNMLSLATKIVEAVYEP- 232 (269)
T ss_pred EecccceeecccccccccccCcccCcChhhhcCC-CCchHHHHHHHHHHHHHHHhCCCcccccCHHHHHHHHhhccCCc-
Confidence 9999999876544444456789999999999754 48999999999999999999999997765544433332211000
Q ss_pred HHHHhhcCCCCcccCCCcccCCCcccccCCCCChhHhhhhccccccCCCCcCCHHHhhCC
Q 011138 361 REEIKCMNPNYTEFKFPQIKAHPWHKIFHKRMPPEALDLVSRLLQYSPSLRCTALEACAH 420 (492)
Q Consensus 361 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~Li~~~L~~dP~~R~t~~e~l~H 420 (492)
.....+++++.+||.+||+.||++||++.|+..+
T Consensus 233 --------------------------~~~~~~~~~l~~li~~cl~~~p~~Rp~~~e~~~~ 266 (269)
T cd08528 233 --------------------------LPEGMYSEDVTDVITSCLTPDAEARPDIIQVSAM 266 (269)
T ss_pred --------------------------CCcccCCHHHHHHHHHHCCCCCccCCCHHHHHHH
Confidence 0012467899999999999999999999998653
No 359
>cd05060 PTKc_Syk_like Catalytic domain of Spleen Tyrosine Kinase-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Spleen Tyrosine Kinase (Syk) subfamily; catalytic (c) domain. The Syk subfamily is composed of Syk, ZAP-70, Shark, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Syk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. They are involved in the signaling downstream of activated receptors (including B-cell, T-cell, and Fc receptors) that contain ITAMs (immunoreceptor tyr activation motifs), leading to processes such as cell proliferation, differentiation, survival, adhesion, mi
Probab=100.00 E-value=2.5e-37 Score=298.10 Aligned_cols=236 Identities=25% Similarity=0.352 Sum_probs=183.7
Q ss_pred eeeccCCceEEEEEEEcCCC---CEEEEEEeccchh-----hHHHHHHHHHHcCCCCccccceeeeeccCCCceEEEEEe
Q 011138 143 RVVGTGSFGVVFQAKCLETG---DSVAIKKVLQDKR-----YKNRELQIMRLLNHPNVVSLKHCFFSTTEKDELYLNLVL 214 (492)
Q Consensus 143 ~~lG~G~fg~Vy~~~~~~~g---~~vAiK~~~~~~~-----~~~~E~~il~~l~h~nIv~l~~~~~~~~~~~~~~~~lV~ 214 (492)
++||+|+||.||+|.+..++ ..||+|.+..... ...+|+.+++.++|+|||++++++. .. ..++||
T Consensus 1 ~~ig~G~~g~v~~~~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~-----~~-~~~~v~ 74 (257)
T cd05060 1 KELGHGNFGSVVKGVYLMKSGKEVEVAVKTLKQEHIAAGKKEFLREASVMAQLDHPCIVRLIGVCK-----GE-PLMLVM 74 (257)
T ss_pred CccCccCceeEEEeEeeccCCCcceEEEEecccccchHHHHHHHHHHHHHHhcCCCCeeeEEEEEc-----CC-ceEEEE
Confidence 46999999999999876655 7899998864432 3457999999999999999998762 22 368999
Q ss_pred eechhh-HHHHhhhhhhcCCCcCHHHHHHHHHHHHHHHHHHHhhCCcccCCCCCCceEEcCCCCcEEEeeecCccccCCC
Q 011138 215 EYISET-VYRVSKHYTRMNQHVPILYVQLYTYQICRALNYLHHVVGVCHRDIKPQNLLVNPHTHQLKICDFGSAKMLVPG 293 (492)
Q Consensus 215 E~~~~~-l~~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~yLH~~~givHrDlKp~NILl~~~~~~vkL~DFG~a~~~~~~ 293 (492)
||+.++ +.+.+.. ...+++..+..++.|++.||.|||. .||+||||||+|||++.++ .+||+|||+++.....
T Consensus 75 e~~~~~~L~~~l~~----~~~~~~~~~~~~~~qi~~~l~~lh~-~~i~H~di~p~nili~~~~-~~kl~df~~~~~~~~~ 148 (257)
T cd05060 75 ELAPLGPLLKYLKK----RREIPVSDLKELAHQVAMGMAYLES-KHFVHRDLAARNVLLVNRH-QAKISDFGMSRALGAG 148 (257)
T ss_pred EeCCCCcHHHHHHh----CCCCCHHHHHHHHHHHHHHHHHHhh-cCeeccCcccceEEEcCCC-cEEeccccccceeecC
Confidence 999854 5444332 3368899999999999999999997 9999999999999999887 7999999999866433
Q ss_pred CCCc----cceeccCccCchhhcCCCCCCcchhhHHHHHHHHHHHh-CCCCCCCCChHHHHHHHHHHhCCCCHHHHhhcC
Q 011138 294 EPNI----SYICSRYYRAPELIFGATEYTTAIDMWSIGCVLAELLL-GQPLFPGESGVDQLVEIIKILGTPTREEIKCMN 368 (492)
Q Consensus 294 ~~~~----~~~gt~~y~aPE~~~~~~~~~~~~DvwSlGvil~ell~-G~~pf~~~~~~~~~~~i~~~~g~p~~~~~~~~~ 368 (492)
.... ...++..|+|||.+.+. .++.++|||||||++|+|++ |.+||...+..+....+... .
T Consensus 149 ~~~~~~~~~~~~~~~y~aPE~~~~~-~~~~~~Di~slG~~l~~~~~~g~~p~~~~~~~~~~~~~~~~--~---------- 215 (257)
T cd05060 149 SDYYRATTAGRWPLKWYAPECINYG-KFSSKSDVWSYGVTLWEAFSYGAKPYGEMKGAEVIAMLESG--E---------- 215 (257)
T ss_pred CcccccccCccccccccCHHHhcCC-CCCccchHHHHHHHHHHHHcCCCCCcccCCHHHHHHHHHcC--C----------
Confidence 3211 11234679999998654 48999999999999999997 99999877664443333210 0
Q ss_pred CCCcccCCCcccCCCcccccCCCCChhHhhhhccccccCCCCcCCHHHhhC
Q 011138 369 PNYTEFKFPQIKAHPWHKIFHKRMPPEALDLVSRLLQYSPSLRCTALEACA 419 (492)
Q Consensus 369 ~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~Li~~~L~~dP~~R~t~~e~l~ 419 (492)
.. ..+..++..+++||.+||..||.+||++.++++
T Consensus 216 ------~~----------~~~~~~~~~l~~li~~cl~~~p~~Rp~~~~l~~ 250 (257)
T cd05060 216 ------RL----------PRPEECPQEIYSIMLSCWKYRPEDRPTFSELES 250 (257)
T ss_pred ------cC----------CCCCCCCHHHHHHHHHHhcCChhhCcCHHHHHH
Confidence 00 012346889999999999999999999999875
No 360
>cd05043 PTK_Ryk Pseudokinase domain of Ryk (Receptor related to tyrosine kinase). Protein Tyrosine Kinase (PTK) family; Receptor related to tyrosine kinase (Ryk); pseudokinase domain. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ryk is a receptor tyr kinase (RTK) containing an extracellular region with two leucine-rich motifs, a transmembrane segment, and an intracellular inactive pseudokinase domain. The extracellular region of Ryk shows homology to the N-terminal domain of Wnt inhibitory factor-1 (WIF) and serves as the ligand (Wnt) binding domain of Ryk. Ryk is expressed in many different tissues both during development and in adults, suggesting a widespread function. It
Probab=100.00 E-value=2e-37 Score=302.68 Aligned_cols=248 Identities=20% Similarity=0.273 Sum_probs=191.2
Q ss_pred cceeEeeeeccCCceEEEEEEEcC----CCCEEEEEEeccch-----hhHHHHHHHHHHcCCCCccccceeeeeccCCCc
Q 011138 137 ISYMAERVVGTGSFGVVFQAKCLE----TGDSVAIKKVLQDK-----RYKNRELQIMRLLNHPNVVSLKHCFFSTTEKDE 207 (492)
Q Consensus 137 ~~y~~~~~lG~G~fg~Vy~~~~~~----~g~~vAiK~~~~~~-----~~~~~E~~il~~l~h~nIv~l~~~~~~~~~~~~ 207 (492)
.+|.+.+.||+|+||.||+|.+.. ++..|++|++.... ....+|+.+++.++|+||+++++++... .
T Consensus 6 ~~~~~~~~i~~g~~g~V~~~~~~~~~~~~~~~v~~k~~~~~~~~~~~~~~~~e~~~l~~l~h~ni~~~~~~~~~~----~ 81 (280)
T cd05043 6 DRVTLSDLLQEGTFGRIFYGILIDEKPGKEEEVFVKTVKDHASEIQVTLLLQESCLLYGLSHQNILPILHVCIED----G 81 (280)
T ss_pred hheEEeeeecccCCceEEEEEEecCCCCceeEEEEEEccCCCCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEecC----C
Confidence 469999999999999999999876 35789999875432 2345799999999999999999986432 2
Q ss_pred eEEEEEeeechh-hHHHHhhhhhhc----CCCcCHHHHHHHHHHHHHHHHHHHhhCCcccCCCCCCceEEcCCCCcEEEe
Q 011138 208 LYLNLVLEYISE-TVYRVSKHYTRM----NQHVPILYVQLYTYQICRALNYLHHVVGVCHRDIKPQNLLVNPHTHQLKIC 282 (492)
Q Consensus 208 ~~~~lV~E~~~~-~l~~~~~~~~~~----~~~~~~~~~~~i~~qi~~aL~yLH~~~givHrDlKp~NILl~~~~~~vkL~ 282 (492)
...++++||+.+ .+...+...... ...+++..+..++.||+.||.|||+ +|++||||||+||+++.++ .+||+
T Consensus 82 ~~~~~~~~~~~~~~L~~~l~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~-~~i~H~di~p~nil~~~~~-~~kl~ 159 (280)
T cd05043 82 EPPFVLYPYMNWGNLKLFLQQCRLGEANNPQALSTQQLVHMAIQIACGMSYLHK-RGVIHKDIAARNCVIDEEL-QVKIT 159 (280)
T ss_pred CCCEEEEEcCCCCcHHHHHHhccccccccccCCCHHHHHHHHHHHHHHHHHHHH-CCEeecccCHhhEEEcCCC-cEEEC
Confidence 346799999985 444443322211 1468899999999999999999997 9999999999999999887 79999
Q ss_pred eecCccccCCCCCC---ccceeccCccCchhhcCCCCCCcchhhHHHHHHHHHHHh-CCCCCCCCChHHHHHHHHHHhCC
Q 011138 283 DFGSAKMLVPGEPN---ISYICSRYYRAPELIFGATEYTTAIDMWSIGCVLAELLL-GQPLFPGESGVDQLVEIIKILGT 358 (492)
Q Consensus 283 DFG~a~~~~~~~~~---~~~~gt~~y~aPE~~~~~~~~~~~~DvwSlGvil~ell~-G~~pf~~~~~~~~~~~i~~~~g~ 358 (492)
|||+++.+...... ....++..|+|||++.+. .++.++|||||||++|++++ |++||...+..+....+..
T Consensus 160 d~g~~~~~~~~~~~~~~~~~~~~~~y~apE~~~~~-~~~~~~Di~slG~~l~el~~~g~~p~~~~~~~~~~~~~~~---- 234 (280)
T cd05043 160 DNALSRDLFPMDYHCLGDNENRPVKWMALESLVNK-EYSSASDVWSFGVLLWELMTLGQTPYVEIDPFEMAAYLKD---- 234 (280)
T ss_pred CCCCcccccCCceEEeCCCCCcchhccCHHHHhcC-CCCchhhHHHhHHHHHHHhcCCCCCcCcCCHHHHHHHHHc----
Confidence 99999865433211 123456779999998654 48999999999999999998 9999987665443222211
Q ss_pred CCHHHHhhcCCCCcccCCCcccCCCcccccCCCCChhHhhhhccccccCCCCcCCHHHhhC
Q 011138 359 PTREEIKCMNPNYTEFKFPQIKAHPWHKIFHKRMPPEALDLVSRLLQYSPSLRCTALEACA 419 (492)
Q Consensus 359 p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~Li~~~L~~dP~~R~t~~e~l~ 419 (492)
...++ ....+++++.+++.+||..||++|||+.++++
T Consensus 235 --------------~~~~~----------~~~~~~~~~~~li~~~l~~~p~~Rps~~~~~~ 271 (280)
T cd05043 235 --------------GYRLA----------QPINCPDELFAVMACCWALDPEERPSFSQLVQ 271 (280)
T ss_pred --------------CCCCC----------CCCcCCHHHHHHHHHHcCCChhhCCCHHHHHH
Confidence 00000 11246789999999999999999999999975
No 361
>smart00219 TyrKc Tyrosine kinase, catalytic domain. Phosphotransferases. Tyrosine-specific kinase subfamily.
Probab=100.00 E-value=3.1e-37 Score=296.72 Aligned_cols=242 Identities=27% Similarity=0.383 Sum_probs=191.2
Q ss_pred eEeeeeccCCceEEEEEEEcCCC----CEEEEEEeccch-----hhHHHHHHHHHHcCCCCccccceeeeeccCCCceEE
Q 011138 140 MAERVVGTGSFGVVFQAKCLETG----DSVAIKKVLQDK-----RYKNRELQIMRLLNHPNVVSLKHCFFSTTEKDELYL 210 (492)
Q Consensus 140 ~~~~~lG~G~fg~Vy~~~~~~~g----~~vAiK~~~~~~-----~~~~~E~~il~~l~h~nIv~l~~~~~~~~~~~~~~~ 210 (492)
.+.+.||.|+||.||+|.+..++ ..||+|.+.... ....+|+.+++.++|+||+++++++. +....
T Consensus 2 ~~~~~lg~g~~g~v~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~-----~~~~~ 76 (258)
T smart00219 2 TLGKKLGEGAFGEVYKGTLKGLSGEKEVEVAVKTLKEDADEQQIEEFLREARIMRKLDHPNIVKLLGVCT-----EEEPL 76 (258)
T ss_pred cccceeccCCCcceEEEEecCCCCCCCceEEEEEccCCCChHHHHHHHHHHHHHHhcCCCchheEEEEEc-----CCCee
Confidence 45678999999999999998766 899999985433 34557999999999999999999883 33568
Q ss_pred EEEeeechhh-HHHHhhhhhhcCCCcCHHHHHHHHHHHHHHHHHHHhhCCcccCCCCCCceEEcCCCCcEEEeeecCccc
Q 011138 211 NLVLEYISET-VYRVSKHYTRMNQHVPILYVQLYTYQICRALNYLHHVVGVCHRDIKPQNLLVNPHTHQLKICDFGSAKM 289 (492)
Q Consensus 211 ~lV~E~~~~~-l~~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~yLH~~~givHrDlKp~NILl~~~~~~vkL~DFG~a~~ 289 (492)
++||||+.++ +.+.+.... ...+++..+..++.||+.||.|||+ .|++||||||+||+++.++ .++|+|||++..
T Consensus 77 ~~i~e~~~~~~l~~~~~~~~--~~~~~~~~~~~~~~ql~~~l~~lh~-~~~~h~dl~~~nil~~~~~-~~~l~dfg~~~~ 152 (258)
T smart00219 77 MIVMEYMEGGDLLDYLRKNR--PKELSLSDLLSFALQIARGMEYLES-KNFIHRDLAARNCLVGENL-VVKISDFGLSRD 152 (258)
T ss_pred EEEEeccCCCCHHHHHHhhh--hccCCHHHHHHHHHHHHHHHHHHhc-CCeeecccccceEEEccCC-eEEEcccCCcee
Confidence 8999999864 444333211 1228999999999999999999997 8999999999999999887 799999999976
Q ss_pred cCCCCCCc--cceeccCccCchhhcCCCCCCcchhhHHHHHHHHHHHh-CCCCCCCCChHHHHHHHHHHhCCCCHHHHhh
Q 011138 290 LVPGEPNI--SYICSRYYRAPELIFGATEYTTAIDMWSIGCVLAELLL-GQPLFPGESGVDQLVEIIKILGTPTREEIKC 366 (492)
Q Consensus 290 ~~~~~~~~--~~~gt~~y~aPE~~~~~~~~~~~~DvwSlGvil~ell~-G~~pf~~~~~~~~~~~i~~~~g~p~~~~~~~ 366 (492)
........ ...+++.|+|||.+. ...++.++|+|||||++|+|++ |.+||...+.......+....
T Consensus 153 ~~~~~~~~~~~~~~~~~y~~Pe~~~-~~~~~~~~Di~slG~i~~~l~~~g~~p~~~~~~~~~~~~~~~~~---------- 221 (258)
T smart00219 153 LYDDDYYKKKGGKLPIRWMAPESLK-DGKFTSKSDVWSFGVLLWEIFTLGESPYPGMSNEEVLEYLKKGY---------- 221 (258)
T ss_pred cccccccccccCCCcccccChHHhc-cCCCCcchhHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHhcCC----------
Confidence 64432221 123678999999984 4458999999999999999998 899998866655554443210
Q ss_pred cCCCCcccCCCcccCCCcccccCCCCChhHhhhhccccccCCCCcCCHHHhhC
Q 011138 367 MNPNYTEFKFPQIKAHPWHKIFHKRMPPEALDLVSRLLQYSPSLRCTALEACA 419 (492)
Q Consensus 367 ~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~Li~~~L~~dP~~R~t~~e~l~ 419 (492)
.+ .....++.++.+++.+||..||++|||+.|+++
T Consensus 222 ---------~~---------~~~~~~~~~~~~~i~~~l~~~p~~Rpt~~~ll~ 256 (258)
T smart00219 222 ---------RL---------PKPENCPPEIYKLMLQCWAEDPEDRPTFSELVE 256 (258)
T ss_pred ---------CC---------CCCCcCCHHHHHHHHHHCcCChhhCcCHHHHHh
Confidence 00 011236889999999999999999999999985
No 362
>cd05095 PTKc_DDR2 Catalytic domain of the Protein Tyrosine Kinase, Discoidin Domain Receptor 2. Protein Tyrosine Kinase (PTK) family; mammalian Discoidin Domain Receptor 2 (DDR2) and homologs; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR2 is a member of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDR2 binds mostly to fibrillar collagens. More recently, it has been reported to also bind collagen X. DDR2 is widely expressed in many tissues wit
Probab=100.00 E-value=3.3e-37 Score=303.87 Aligned_cols=254 Identities=21% Similarity=0.277 Sum_probs=188.7
Q ss_pred cceeEeeeeccCCceEEEEEEEcC----------------CCCEEEEEEeccch-----hhHHHHHHHHHHcCCCCcccc
Q 011138 137 ISYMAERVVGTGSFGVVFQAKCLE----------------TGDSVAIKKVLQDK-----RYKNRELQIMRLLNHPNVVSL 195 (492)
Q Consensus 137 ~~y~~~~~lG~G~fg~Vy~~~~~~----------------~g~~vAiK~~~~~~-----~~~~~E~~il~~l~h~nIv~l 195 (492)
.+|.+.+.||+|+||.||++.+.. ++..||+|.+.... ....+|+.+++.++|+||+++
T Consensus 5 ~~~~~~~~lg~G~~g~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~E~~~l~~l~~~~i~~~ 84 (296)
T cd05095 5 KRLTFKEKLGEGQFGEVHLCEAEGMEKFMDKDFSLDVSGNQPVLVAVKMLREDANKNARNDFLKEIKIMSRLKDPNIIRL 84 (296)
T ss_pred hhceeeeeccCCCCCeEEecccccccccccccccccCCCCceeEEEEEeccccCCHHHHHHHHHHHHHHHhCCCCCcceE
Confidence 359999999999999999986432 34579999886432 345579999999999999999
Q ss_pred ceeeeeccCCCceEEEEEeeechh-hHHHHhhhhhh-------cCCCcCHHHHHHHHHHHHHHHHHHHhhCCcccCCCCC
Q 011138 196 KHCFFSTTEKDELYLNLVLEYISE-TVYRVSKHYTR-------MNQHVPILYVQLYTYQICRALNYLHHVVGVCHRDIKP 267 (492)
Q Consensus 196 ~~~~~~~~~~~~~~~~lV~E~~~~-~l~~~~~~~~~-------~~~~~~~~~~~~i~~qi~~aL~yLH~~~givHrDlKp 267 (492)
++++. +....++||||+.+ ++...+..... ....+++..+..++.||+.||.|||+ +||+||||||
T Consensus 85 ~~~~~-----~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~al~~lH~-~~i~H~dlkp 158 (296)
T cd05095 85 LAVCI-----TSDPLCMITEYMENGDLNQFLSRHEPQEAAEKADVVTISYSTLIFMATQIASGMKYLSS-LNFVHRDLAT 158 (296)
T ss_pred EEEEe-----cCCccEEEEEeCCCCcHHHHHHhcCcccccccccccccCHHHHHHHHHHHHHHHHHHHH-CCeecccCCh
Confidence 99883 33458899999985 45444433211 11346777899999999999999997 9999999999
Q ss_pred CceEEcCCCCcEEEeeecCccccCCCCC---CccceeccCccCchhhcCCCCCCcchhhHHHHHHHHHHHh--CCCCCCC
Q 011138 268 QNLLVNPHTHQLKICDFGSAKMLVPGEP---NISYICSRYYRAPELIFGATEYTTAIDMWSIGCVLAELLL--GQPLFPG 342 (492)
Q Consensus 268 ~NILl~~~~~~vkL~DFG~a~~~~~~~~---~~~~~gt~~y~aPE~~~~~~~~~~~~DvwSlGvil~ell~--G~~pf~~ 342 (492)
+|||++.++ .++|+|||+++.+..... .....+++.|+|||...+. .++.++|||||||++|||++ |..||..
T Consensus 159 ~Nili~~~~-~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~-~~~~~~DiwSlG~~l~el~~~~~~~p~~~ 236 (296)
T cd05095 159 RNCLVGKNY-TIKIADFGMSRNLYSGDYYRIQGRAVLPIRWMSWESILLG-KFTTASDVWAFGVTLWEILTLCKEQPYSQ 236 (296)
T ss_pred heEEEcCCC-CEEeccCcccccccCCcceeccCcCcCccccCCHHHHhcC-CccchhhhhHHHHHHHHHHHhCCCCCccc
Confidence 999999877 799999999976533321 1123346789999988654 48999999999999999998 7799987
Q ss_pred CChHHHHHHHHHHhCCCCHHHHhhcCCCCcccCCCcccCCCcccccCCCCChhHhhhhccccccCCCCcCCHHHhhC
Q 011138 343 ESGVDQLVEIIKILGTPTREEIKCMNPNYTEFKFPQIKAHPWHKIFHKRMPPEALDLVSRLLQYSPSLRCTALEACA 419 (492)
Q Consensus 343 ~~~~~~~~~i~~~~g~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~Li~~~L~~dP~~R~t~~e~l~ 419 (492)
.+..+.+......... ......++ .+..+++.+.+|+.+||+.||.+||++.++++
T Consensus 237 ~~~~~~~~~~~~~~~~-----------~~~~~~~~----------~~~~~~~~~~~li~~cl~~~p~~Rp~~~~i~~ 292 (296)
T cd05095 237 LSDEQVIENTGEFFRD-----------QGRQVYLP----------KPALCPDSLYKLMLSCWRRNAKERPSFQEIHA 292 (296)
T ss_pred cChHHHHHHHHHHHhh-----------ccccccCC----------CCCCCCHHHHHHHHHHcCCCcccCCCHHHHHH
Confidence 6655444332221100 00000011 11246788999999999999999999999864
No 363
>KOG0587 consensus Traf2- and Nck-interacting kinase and related germinal center kinase (GCK) family protein kinases [Signal transduction mechanisms]
Probab=100.00 E-value=8.9e-38 Score=323.79 Aligned_cols=265 Identities=25% Similarity=0.391 Sum_probs=217.1
Q ss_pred CccccceeEeeeeccCCceEEEEEEEcCCCCEEEEEEeccc---hhhHHHHHHHHHHc-CCCCccccceeeeeccCCCce
Q 011138 133 PKQTISYMAERVVGTGSFGVVFQAKCLETGDSVAIKKVLQD---KRYKNRELQIMRLL-NHPNVVSLKHCFFSTTEKDEL 208 (492)
Q Consensus 133 ~~~~~~y~~~~~lG~G~fg~Vy~~~~~~~g~~vAiK~~~~~---~~~~~~E~~il~~l-~h~nIv~l~~~~~~~~~~~~~ 208 (492)
|...+-|++.++||.|.+|.||+++.+.+|+..|+|+...+ ....+.|.+|++.+ .|||++.+|++|+........
T Consensus 15 pdp~d~~ei~evig~Gtygkv~k~k~~~~~~~aa~kI~~~~~d~deEiE~eynil~~~~~hpnv~~fyg~~~k~~~~~~D 94 (953)
T KOG0587|consen 15 PDPADIFEIIEVIGNGTYGKVYKGRHVKTGQLAAIKIMDPTEDEEEEIELEYNMLKKYSHHPNVATFYGAFIKKDPGNGD 94 (953)
T ss_pred CCCCCccEEEEEEeeccceeEEEEeeeecCceeeeEeecCCccccHHHHHHHHHHHhccCCCCcceEEEEEEEecCCCCC
Confidence 44556699999999999999999999999999999987543 34456788898887 599999999999887776677
Q ss_pred EEEEEeeechhhH-HHHhhhhhhcCCCcCHHHHHHHHHHHHHHHHHHHhhCCcccCCCCCCceEEcCCCCcEEEeeecCc
Q 011138 209 YLNLVLEYISETV-YRVSKHYTRMNQHVPILYVQLYTYQICRALNYLHHVVGVCHRDIKPQNLLVNPHTHQLKICDFGSA 287 (492)
Q Consensus 209 ~~~lV~E~~~~~l-~~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~yLH~~~givHrDlKp~NILl~~~~~~vkL~DFG~a 287 (492)
.++||||||+||. .++.+... +..+.+..+..|++.++.||.+||. ..++|||||-.|||++.++ .|||+|||.+
T Consensus 95 qLWLVMEfC~gGSVTDLVKn~~--g~rl~E~~IaYI~re~lrgl~HLH~-nkviHRDikG~NiLLT~e~-~VKLvDFGvS 170 (953)
T KOG0587|consen 95 QLWLVMEFCGGGSVTDLVKNTK--GNRLKEEWIAYILREILRGLAHLHN-NKVIHRDIKGQNVLLTENA-EVKLVDFGVS 170 (953)
T ss_pred eEEEEeeccCCccHHHHHhhhc--ccchhhHHHHHHHHHHHHHHHHHhh-cceeeecccCceEEEeccC-cEEEeeeeee
Confidence 8999999999654 45555544 7889999999999999999999997 8999999999999999998 7999999998
Q ss_pred cccCCC-CCCccceeccCccCchhhcCC----CCCCcchhhHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCCHH
Q 011138 288 KMLVPG-EPNISYICSRYYRAPELIFGA----TEYTTAIDMWSIGCVLAELLLGQPLFPGESGVDQLVEIIKILGTPTRE 362 (492)
Q Consensus 288 ~~~~~~-~~~~~~~gt~~y~aPE~~~~~----~~~~~~~DvwSlGvil~ell~G~~pf~~~~~~~~~~~i~~~~g~p~~~ 362 (492)
..+... ....+.+|||+|||||++... ..|+..+|+||||++..||--|.+|+-+......+..|-. .|++.
T Consensus 171 aQldsT~grRnT~iGtP~WMAPEViac~e~~d~tyd~R~D~WsLGITaIEladG~PPl~DmHPmraLF~IpR---NPPPk 247 (953)
T KOG0587|consen 171 AQLDSTVGRRNTFIGTPYWMAPEVIACDESPDATYDYRSDLWSLGITAIEMAEGAPPLCDMHPMRALFLIPR---NPPPK 247 (953)
T ss_pred eeeecccccccCcCCCcccccceeeecccCCCCCcccccchhhccceeehhcCCCCCccCcchhhhhccCCC---CCCcc
Confidence 766433 345678999999999999533 2377899999999999999999999987766555544422 22211
Q ss_pred HHhhcCCCCcccCCCcccCCCcccccCCCCChhHhhhhccccccCCCCcCCHHHhhCCCCCCCCC
Q 011138 363 EIKCMNPNYTEFKFPQIKAHPWHKIFHKRMPPEALDLVSRLLQYSPSLRCTALEACAHPFFDDLR 427 (492)
Q Consensus 363 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~Li~~~L~~dP~~R~t~~e~l~Hp~f~~~~ 427 (492)
.. -++.-+.++.+||..||.+|-.+||+..++|.|||+++..
T Consensus 248 ------------------Lk-----rp~kWs~~FndFIs~cL~Kd~e~RP~~~~ll~hpFi~e~~ 289 (953)
T KOG0587|consen 248 ------------------LK-----RPKKWSKKFNDFISTCLVKDYEQRPSTEELLKHPFITEQP 289 (953)
T ss_pred ------------------cc-----chhhHHHHHHHHHHHHHhhccccCcchhhhccCCcccccc
Confidence 11 1234478899999999999999999999999999998543
No 364
>cd05085 PTKc_Fer Catalytic domain of the Protein Tyrosine Kinase, Fer. Protein Tyrosine Kinase (PTK) family; Fer kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fer kinase is a member of the Fes subfamily of proteins which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. Fer kinase is expressed in a wide variety of tissues, and is found to reside in both the cytoplasm and the nucleus. It plays important roles in neuronal polarization and neurite development, cytoskeletal reorganization, cell migration, growth factor signaling, and the regulation of cell-c
Probab=100.00 E-value=3.3e-37 Score=295.81 Aligned_cols=236 Identities=23% Similarity=0.343 Sum_probs=183.2
Q ss_pred eeccCCceEEEEEEEcCCCCEEEEEEeccch-----hhHHHHHHHHHHcCCCCccccceeeeeccCCCceEEEEEeeech
Q 011138 144 VVGTGSFGVVFQAKCLETGDSVAIKKVLQDK-----RYKNRELQIMRLLNHPNVVSLKHCFFSTTEKDELYLNLVLEYIS 218 (492)
Q Consensus 144 ~lG~G~fg~Vy~~~~~~~g~~vAiK~~~~~~-----~~~~~E~~il~~l~h~nIv~l~~~~~~~~~~~~~~~~lV~E~~~ 218 (492)
+||+|+||.||+|.. .++..||+|.+.... ....+|+.+++.++||||+++++++. .....++||||++
T Consensus 2 ~ig~g~~g~vy~~~~-~~~~~~a~K~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~-----~~~~~~lv~e~~~ 75 (250)
T cd05085 2 LLGKGNFGEVFKGTL-KDKTPVAVKTCKEDLPQELKIKFLSEARILKQYDHPNIVKLIGVCT-----QRQPIYIVMELVP 75 (250)
T ss_pred ccCCCCCceEEEEEe-cCCcEEEEEecCCcCCHHHHHHHHHHHHHHHhCCCCCcCeEEEEEe-----cCCccEEEEECCC
Confidence 689999999999985 468899999875432 23457999999999999999999883 3345889999998
Q ss_pred hhH-HHHhhhhhhcCCCcCHHHHHHHHHHHHHHHHHHHhhCCcccCCCCCCceEEcCCCCcEEEeeecCccccCCCCCC-
Q 011138 219 ETV-YRVSKHYTRMNQHVPILYVQLYTYQICRALNYLHHVVGVCHRDIKPQNLLVNPHTHQLKICDFGSAKMLVPGEPN- 296 (492)
Q Consensus 219 ~~l-~~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~yLH~~~givHrDlKp~NILl~~~~~~vkL~DFG~a~~~~~~~~~- 296 (492)
++. ...+. .....+++..+..++.|++.||.|||+ +|++||||||+||+++.++ .+||+|||++.........
T Consensus 76 ~~~L~~~~~---~~~~~~~~~~~~~~~~~i~~~l~~lH~-~~~~H~dl~p~nili~~~~-~~~l~d~g~~~~~~~~~~~~ 150 (250)
T cd05085 76 GGDFLSFLR---KKKDELKTKQLVKFALDAAAGMAYLES-KNCIHRDLAARNCLVGENN-VLKISDFGMSRQEDDGIYSS 150 (250)
T ss_pred CCcHHHHHH---hcCCCCCHHHHHHHHHHHHHHHHHHHh-CCeeecccChheEEEcCCC-eEEECCCccceecccccccc
Confidence 653 33322 223457888999999999999999997 9999999999999999877 7999999998754322211
Q ss_pred -ccceeccCccCchhhcCCCCCCcchhhHHHHHHHHHHHh-CCCCCCCCChHHHHHHHHHHhCCCCHHHHhhcCCCCccc
Q 011138 297 -ISYICSRYYRAPELIFGATEYTTAIDMWSIGCVLAELLL-GQPLFPGESGVDQLVEIIKILGTPTREEIKCMNPNYTEF 374 (492)
Q Consensus 297 -~~~~gt~~y~aPE~~~~~~~~~~~~DvwSlGvil~ell~-G~~pf~~~~~~~~~~~i~~~~g~p~~~~~~~~~~~~~~~ 374 (492)
....++..|+|||++.+ ..++.++|||||||++|+|++ |..||.+.........+.... ..
T Consensus 151 ~~~~~~~~~y~aPE~~~~-~~~~~~~Di~slG~ll~~~~~~g~~p~~~~~~~~~~~~~~~~~----------------~~ 213 (250)
T cd05085 151 SGLKQIPIKWTAPEALNY-GRYSSESDVWSYGILLWETFSLGVCPYPGMTNQQAREQVEKGY----------------RM 213 (250)
T ss_pred CCCCCCcccccCHHHhcc-CCCCchhHHHHHHHHHHHHhcCCCCCCCCCCHHHHHHHHHcCC----------------CC
Confidence 11234567999999854 448899999999999999998 999998776554433332100 00
Q ss_pred CCCcccCCCcccccCCCCChhHhhhhccccccCCCCcCCHHHhhC
Q 011138 375 KFPQIKAHPWHKIFHKRMPPEALDLVSRLLQYSPSLRCTALEACA 419 (492)
Q Consensus 375 ~~~~~~~~~~~~~~~~~~s~~~~~Li~~~L~~dP~~R~t~~e~l~ 419 (492)
..+..++.++.+|+.+||..||++||++.++++
T Consensus 214 ------------~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~l~~ 246 (250)
T cd05085 214 ------------SCPQKCPDDVYKVMQRCWDYKPENRPKFSELQK 246 (250)
T ss_pred ------------CCCCCCCHHHHHHHHHHcccCcccCCCHHHHHH
Confidence 012346889999999999999999999999875
No 365
>cd05087 PTKc_Aatyk1_Aatyk3 Catalytic domain of the Protein Tyrosine Kinases, Apoptosis-associated tyrosine kinases 1 and 3. Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase 1 (Aatyk1) and Aatyk3; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk1 and Aatyk3 are members of the Aatyk subfamily of proteins. Aatyk3 is a receptor kinase containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk1 has a similar domain arrangement but without the transmembrane segment and is thus, a cytoplasmic (or nonreceptor) kinase. The expression of Aatyk1 (also referred simply as Aatyk) is upregulated during growth arrest and apoptosis in myeloid cells
Probab=100.00 E-value=4.4e-37 Score=298.52 Aligned_cols=246 Identities=20% Similarity=0.219 Sum_probs=180.7
Q ss_pred eeeccCCceEEEEEEEc--CCCCEEEEEEeccch-----hhHHHHHHHHHHcCCCCccccceeeeeccCCCceEEEEEee
Q 011138 143 RVVGTGSFGVVFQAKCL--ETGDSVAIKKVLQDK-----RYKNRELQIMRLLNHPNVVSLKHCFFSTTEKDELYLNLVLE 215 (492)
Q Consensus 143 ~~lG~G~fg~Vy~~~~~--~~g~~vAiK~~~~~~-----~~~~~E~~il~~l~h~nIv~l~~~~~~~~~~~~~~~~lV~E 215 (492)
+.||+|+||.||+|.+. .++..+|+|.+.... ....+|+.+++.++||||+++++++ .+..++++|||
T Consensus 1 ~~lg~G~~g~Vy~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~-----~~~~~~~lv~e 75 (269)
T cd05087 1 KEIGNGWFGKVILGEVNSGYTPAQVVVKELRVSASVQEQMKFLEEAQPYRSLQHSNLLQCLGQC-----TEVTPYLLVME 75 (269)
T ss_pred CcccccCCceEEEEEEcCCCCceEEEEEecCCCCChHHHHHHHHHHHHHHhCCCCCEeeEEEEE-----cCCCCcEEEEE
Confidence 35899999999999864 355779999875432 2345799999999999999999987 34445889999
Q ss_pred echhh-HHHHhhhhhh-cCCCcCHHHHHHHHHHHHHHHHHHHhhCCcccCCCCCCceEEcCCCCcEEEeeecCccccCCC
Q 011138 216 YISET-VYRVSKHYTR-MNQHVPILYVQLYTYQICRALNYLHHVVGVCHRDIKPQNLLVNPHTHQLKICDFGSAKMLVPG 293 (492)
Q Consensus 216 ~~~~~-l~~~~~~~~~-~~~~~~~~~~~~i~~qi~~aL~yLH~~~givHrDlKp~NILl~~~~~~vkL~DFG~a~~~~~~ 293 (492)
|++++ +.+.+..... .....+...++.++.|++.||.|||+ .||+||||||+||+++.++ .+||+|||+++.....
T Consensus 76 ~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~-~~i~H~dlkp~nil~~~~~-~~kL~dfg~~~~~~~~ 153 (269)
T cd05087 76 FCPLGDLKGYLRSCRKAELMTPDPTTLQRMACEIALGLLHLHK-NNFIHSDLALRNCLLTADL-TVKIGDYGLSHNKYKE 153 (269)
T ss_pred CCCCCcHHHHHHHhhhcccccccHHHHHHHHHHHHHHHHHHHH-CCEeccccCcceEEEcCCC-cEEECCccccccccCc
Confidence 99854 4444432221 12245666778899999999999997 9999999999999999877 7999999998754322
Q ss_pred CC---CccceeccCccCchhhcCCC------CCCcchhhHHHHHHHHHHHh-CCCCCCCCChHHHHHHHHHHhCCCCHHH
Q 011138 294 EP---NISYICSRYYRAPELIFGAT------EYTTAIDMWSIGCVLAELLL-GQPLFPGESGVDQLVEIIKILGTPTREE 363 (492)
Q Consensus 294 ~~---~~~~~gt~~y~aPE~~~~~~------~~~~~~DvwSlGvil~ell~-G~~pf~~~~~~~~~~~i~~~~g~p~~~~ 363 (492)
.. .....++..|+|||++.+.. .++.++|||||||++|||++ |..||......+........
T Consensus 154 ~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~~~DiwslG~~l~el~~~g~~p~~~~~~~~~~~~~~~~-------- 225 (269)
T cd05087 154 DYYVTPDQLWVPLRWIAPELVDEVHGNLLVVDQTKESNVWSLGVTIWELFELGSQPYRHLSDEQVLTYTVRE-------- 225 (269)
T ss_pred ceeecCCCcCCcccccCHhHhccccccccccCCCccchhHHHHHHHHHHHhCCCCCCCCCChHHHHHHHhhc--------
Confidence 21 12345678899999985321 35789999999999999996 99999876654433322211
Q ss_pred HhhcCCCCcccCCCcccCCCcccccCCCCChhHhhhhccccccCCCCcCCHHHhhC
Q 011138 364 IKCMNPNYTEFKFPQIKAHPWHKIFHKRMPPEALDLVSRLLQYSPSLRCTALEACA 419 (492)
Q Consensus 364 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~Li~~~L~~dP~~R~t~~e~l~ 419 (492)
....++. ..+....++.+.+++.+|+ .+|++|||+.+++.
T Consensus 226 --------~~~~~~~-------~~~~~~~~~~~~~l~~~c~-~~P~~Rpt~~~l~~ 265 (269)
T cd05087 226 --------QQLKLPK-------PRLKLPLSDRWYEVMQFCW-LQPEQRPSAEEVHL 265 (269)
T ss_pred --------ccCCCCC-------CccCCCCChHHHHHHHHHh-cCcccCCCHHHHHH
Confidence 0001110 0011235778999999998 68999999999874
No 366
>cd05041 PTKc_Fes_like Catalytic domain of Fes-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Fes subfamily; catalytic (c) domain. Fes subfamily members include Fes (or Fps), Fer, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fes subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. The genes for Fes (feline sarcoma) and Fps (Fujinami poultry sarcoma) were first isolated from tumor-causing retroviruses. The viral oncogenes encode chimeric Fes proteins consisting of Gag sequences at the N-termini, resulting in unregulated tyr k
Probab=100.00 E-value=2.8e-37 Score=296.43 Aligned_cols=237 Identities=24% Similarity=0.355 Sum_probs=184.6
Q ss_pred eeeccCCceEEEEEEEcCCCCEEEEEEeccc-----hhhHHHHHHHHHHcCCCCccccceeeeeccCCCceEEEEEeeec
Q 011138 143 RVVGTGSFGVVFQAKCLETGDSVAIKKVLQD-----KRYKNRELQIMRLLNHPNVVSLKHCFFSTTEKDELYLNLVLEYI 217 (492)
Q Consensus 143 ~~lG~G~fg~Vy~~~~~~~g~~vAiK~~~~~-----~~~~~~E~~il~~l~h~nIv~l~~~~~~~~~~~~~~~~lV~E~~ 217 (492)
+.||.|+||.||+|.+.. ++.||+|.+... .....+|+++++.++|+||+++++++ .+..+.++||||+
T Consensus 1 ~~lg~g~~g~v~~~~~~~-~~~v~~K~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~-----~~~~~~~~v~e~~ 74 (251)
T cd05041 1 EKIGKGNFGDVYKGVLKG-NTEVAVKTCRSTLPPDLKRKFLQEAEILKQYDHPNIVKLIGVC-----VQKQPIYIVMELV 74 (251)
T ss_pred CccccCCCceEEEEEEeC-CCcEEEEeccccCCHHHHHHHHHHHHHHHhCCCCCeEEEEEEE-----ecCCCeEEEEEcC
Confidence 369999999999999877 999999987543 23456799999999999999999988 3444588999999
Q ss_pred hhh-HHHHhhhhhhcCCCcCHHHHHHHHHHHHHHHHHHHhhCCcccCCCCCCceEEcCCCCcEEEeeecCccccCCCCCC
Q 011138 218 SET-VYRVSKHYTRMNQHVPILYVQLYTYQICRALNYLHHVVGVCHRDIKPQNLLVNPHTHQLKICDFGSAKMLVPGEPN 296 (492)
Q Consensus 218 ~~~-l~~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~yLH~~~givHrDlKp~NILl~~~~~~vkL~DFG~a~~~~~~~~~ 296 (492)
.++ +.+.+. .....++...+..++.|++.||.|||+ +|++||||||+|||++.++ .+||+|||++.........
T Consensus 75 ~~~~l~~~l~---~~~~~~~~~~~~~~~~~~~~~l~~lH~-~~i~h~di~p~nili~~~~-~~~l~d~g~~~~~~~~~~~ 149 (251)
T cd05041 75 PGGSLLTFLR---KKKNRLTVKKLLQMSLDAAAGMEYLES-KNCIHRDLAARNCLVGENN-VLKISDFGMSREEEGGIYT 149 (251)
T ss_pred CCCcHHHHHH---hcCCCCCHHHHHHHHHHHHHHHHHHHh-CCEehhhcCcceEEEcCCC-cEEEeeccccccccCCcce
Confidence 765 433332 223457888889999999999999997 9999999999999999887 7999999998755322111
Q ss_pred ---ccceeccCccCchhhcCCCCCCcchhhHHHHHHHHHHHh-CCCCCCCCChHHHHHHHHHHhCCCCHHHHhhcCCCCc
Q 011138 297 ---ISYICSRYYRAPELIFGATEYTTAIDMWSIGCVLAELLL-GQPLFPGESGVDQLVEIIKILGTPTREEIKCMNPNYT 372 (492)
Q Consensus 297 ---~~~~gt~~y~aPE~~~~~~~~~~~~DvwSlGvil~ell~-G~~pf~~~~~~~~~~~i~~~~g~p~~~~~~~~~~~~~ 372 (492)
....++..|+|||.+.+. .++.++|+|||||++|+|++ |..||...........+...
T Consensus 150 ~~~~~~~~~~~y~~PE~~~~~-~~~~~~Di~slG~i~~~l~t~~~~p~~~~~~~~~~~~~~~~----------------- 211 (251)
T cd05041 150 VSDGLKQIPIKWTAPEALNYG-RYTSESDVWSYGILLWETFSLGDTPYPGMSNQQTRERIESG----------------- 211 (251)
T ss_pred eccccCcceeccCChHhhccC-CCCcchhHHHHHHHHHHHHhccCCCCccCCHHHHHHHHhcC-----------------
Confidence 112235679999998654 48999999999999999998 89999876654433332110
Q ss_pred ccCCCcccCCCcccccCCCCChhHhhhhccccccCCCCcCCHHHhhC
Q 011138 373 EFKFPQIKAHPWHKIFHKRMPPEALDLVSRLLQYSPSLRCTALEACA 419 (492)
Q Consensus 373 ~~~~~~~~~~~~~~~~~~~~s~~~~~Li~~~L~~dP~~R~t~~e~l~ 419 (492)
... ..+..++.++.+|+.+||..+|.+|||+.++++
T Consensus 212 -~~~----------~~~~~~~~~~~~li~~~l~~~p~~Rp~~~ell~ 247 (251)
T cd05041 212 -YRM----------PAPQLCPEEIYRLMLQCWAYDPENRPSFSEIYN 247 (251)
T ss_pred -CCC----------CCCccCCHHHHHHHHHHhccChhhCcCHHHHHH
Confidence 000 012346889999999999999999999999985
No 367
>cd05057 PTKc_EGFR_like Catalytic domain of Epidermal Growth Factor Receptor-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Epidermal Growth Factor Receptor (EGFR) subfamily; catalytic (c) domain. EGFR (HER, ErbB) subfamily members include EGFR (HER1, ErbB1), HER2 (ErbB2), HER3 (ErbB3), HER4 (ErbB4), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The EGFR proteins are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instea
Probab=100.00 E-value=3.7e-37 Score=300.67 Aligned_cols=243 Identities=24% Similarity=0.351 Sum_probs=190.2
Q ss_pred cceeEeeeeccCCceEEEEEEEcCCCC----EEEEEEeccch-----hhHHHHHHHHHHcCCCCccccceeeeeccCCCc
Q 011138 137 ISYMAERVVGTGSFGVVFQAKCLETGD----SVAIKKVLQDK-----RYKNRELQIMRLLNHPNVVSLKHCFFSTTEKDE 207 (492)
Q Consensus 137 ~~y~~~~~lG~G~fg~Vy~~~~~~~g~----~vAiK~~~~~~-----~~~~~E~~il~~l~h~nIv~l~~~~~~~~~~~~ 207 (492)
.+|.+.+.||+|+||.||+|.++.+|+ .||+|.+.... ....+|+.+++.++||||+++++++..
T Consensus 7 ~~~~~~~~ig~g~~g~v~~~~~~~~~~~~~~~~aik~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~------ 80 (279)
T cd05057 7 TELEKIKVLGSGAFGTVYKGVWIPEGEKVKIPVAIKVLREETSPKANKEILDEAYVMASVDHPHVVRLLGICLS------ 80 (279)
T ss_pred HHcEEcceecCCCCccEEEEEEecCCCCcceEEEEEeccCCCCHHHHHHHHHHHHHHHhCCCCCcceEEEEEec------
Confidence 469999999999999999999877765 58999875432 334579999999999999999998853
Q ss_pred eEEEEEeeechhh-HHHHhhhhhhcCCCcCHHHHHHHHHHHHHHHHHHHhhCCcccCCCCCCceEEcCCCCcEEEeeecC
Q 011138 208 LYLNLVLEYISET-VYRVSKHYTRMNQHVPILYVQLYTYQICRALNYLHHVVGVCHRDIKPQNLLVNPHTHQLKICDFGS 286 (492)
Q Consensus 208 ~~~~lV~E~~~~~-l~~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~yLH~~~givHrDlKp~NILl~~~~~~vkL~DFG~ 286 (492)
...++||||+.++ +.+.+. .....+++..+..++.||+.||+|||+ +||+||||||+|||++.++ .+||+|||+
T Consensus 81 ~~~~~v~e~~~~g~L~~~l~---~~~~~~~~~~~~~~~~qi~~~l~~LH~-~~i~H~di~p~nil~~~~~-~~kL~dfg~ 155 (279)
T cd05057 81 SQVQLITQLMPLGCLLDYVR---NHKDNIGSQYLLNWCVQIAKGMSYLEE-KRLVHRDLAARNVLVKTPQ-HVKITDFGL 155 (279)
T ss_pred CceEEEEecCCCCcHHHHHH---hccCCCCHHHHHHHHHHHHHHHHHHHh-CCEEecccCcceEEEcCCC-eEEECCCcc
Confidence 2478999999864 443332 223458899999999999999999997 9999999999999999877 799999999
Q ss_pred ccccCCCCCCcc---ceeccCccCchhhcCCCCCCcchhhHHHHHHHHHHHh-CCCCCCCCChHHHHHHHHHHhCCCCHH
Q 011138 287 AKMLVPGEPNIS---YICSRYYRAPELIFGATEYTTAIDMWSIGCVLAELLL-GQPLFPGESGVDQLVEIIKILGTPTRE 362 (492)
Q Consensus 287 a~~~~~~~~~~~---~~gt~~y~aPE~~~~~~~~~~~~DvwSlGvil~ell~-G~~pf~~~~~~~~~~~i~~~~g~p~~~ 362 (492)
++.......... ..++..|+|||.+.. ..++.++|+|||||++|||++ |..||.+....+....+... .
T Consensus 156 ~~~~~~~~~~~~~~~~~~~~~y~~PE~~~~-~~~~~~~Di~slG~~l~el~~~g~~p~~~~~~~~~~~~~~~~--~---- 228 (279)
T cd05057 156 AKLLDVDEKEYHAEGGKVPIKWMALESILH-RIYTHKSDVWSYGVTVWELMTFGAKPYEGIPAVEIPDLLEKG--E---- 228 (279)
T ss_pred cccccCcccceecCCCcccccccCHHHhhc-CCcCchhhHHHHHHHHHHHhcCCCCCCCCCCHHHHHHHHhCC--C----
Confidence 987643332221 223567999999854 458899999999999999998 99999887654433333210 0
Q ss_pred HHhhcCCCCcccCCCcccCCCcccccCCCCChhHhhhhccccccCCCCcCCHHHhhC
Q 011138 363 EIKCMNPNYTEFKFPQIKAHPWHKIFHKRMPPEALDLVSRLLQYSPSLRCTALEACA 419 (492)
Q Consensus 363 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~Li~~~L~~dP~~R~t~~e~l~ 419 (492)
.++ .+...+.++.+++.+||..||.+||++.++++
T Consensus 229 ------------~~~----------~~~~~~~~~~~~~~~~l~~~p~~Rp~~~~l~~ 263 (279)
T cd05057 229 ------------RLP----------QPPICTIDVYMVLVKCWMIDAESRPTFKELIN 263 (279)
T ss_pred ------------CCC----------CCCCCCHHHHHHHHHHcCCChhhCCCHHHHHH
Confidence 000 11235788999999999999999999999875
No 368
>cd05079 PTKc_Jak1_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinase, Janus kinase 1. Protein Tyrosine Kinase (PTK) family; Janus kinase 1 (Jak1); catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak1 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of signal transducers a
Probab=100.00 E-value=2.6e-37 Score=302.73 Aligned_cols=254 Identities=24% Similarity=0.385 Sum_probs=186.7
Q ss_pred eeEeeeeccCCceEEEEEEE----cCCCCEEEEEEeccc-----hhhHHHHHHHHHHcCCCCccccceeeeeccCCCceE
Q 011138 139 YMAERVVGTGSFGVVFQAKC----LETGDSVAIKKVLQD-----KRYKNRELQIMRLLNHPNVVSLKHCFFSTTEKDELY 209 (492)
Q Consensus 139 y~~~~~lG~G~fg~Vy~~~~----~~~g~~vAiK~~~~~-----~~~~~~E~~il~~l~h~nIv~l~~~~~~~~~~~~~~ 209 (492)
|.+.+.||+|+||.||+|.. ..++..||+|.+... .....+|+.+++.++||||+++++++... +..+
T Consensus 6 ~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~va~K~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~---~~~~ 82 (284)
T cd05079 6 LKRIRDLGEGHFGKVELCRYDPEGDNTGEQVAVKSLKPESGGNHIADLKKEIEILRNLYHENIVKYKGICTED---GGNG 82 (284)
T ss_pred hhhceecCCCCceeEEEEEEccCCCCccceEEEEEcCccccHHHHHHHHHHHHHHHhCCCCCeeeeeeEEecC---CCCc
Confidence 78899999999999999974 457889999988533 13456799999999999999999887432 2345
Q ss_pred EEEEeeechhhHH-HHhhhhhhcCCCcCHHHHHHHHHHHHHHHHHHHhhCCcccCCCCCCceEEcCCCCcEEEeeecCcc
Q 011138 210 LNLVLEYISETVY-RVSKHYTRMNQHVPILYVQLYTYQICRALNYLHHVVGVCHRDIKPQNLLVNPHTHQLKICDFGSAK 288 (492)
Q Consensus 210 ~~lV~E~~~~~l~-~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~yLH~~~givHrDlKp~NILl~~~~~~vkL~DFG~a~ 288 (492)
.++||||++++.+ ..+. .....+++..+..++.||+.||+|||+ +||+||||||+||+++.++ .+||+|||+++
T Consensus 83 ~~lv~e~~~g~~L~~~l~---~~~~~~~~~~~~~i~~~i~~aL~~lH~-~gi~H~dlkp~Nil~~~~~-~~~l~dfg~~~ 157 (284)
T cd05079 83 IKLIMEFLPSGSLKEYLP---RNKNKINLKQQLKYAVQICKGMDYLGS-RQYVHRDLAARNVLVESEH-QVKIGDFGLTK 157 (284)
T ss_pred eEEEEEccCCCCHHHHHH---hccCCCCHHHHHHHHHHHHHHHHHHHH-CCeeecccchheEEEcCCC-CEEECCCcccc
Confidence 7899999986543 3322 223457889999999999999999997 9999999999999999877 79999999998
Q ss_pred ccCCCCC----CccceeccCccCchhhcCCCCCCcchhhHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCCHH--
Q 011138 289 MLVPGEP----NISYICSRYYRAPELIFGATEYTTAIDMWSIGCVLAELLLGQPLFPGESGVDQLVEIIKILGTPTRE-- 362 (492)
Q Consensus 289 ~~~~~~~----~~~~~gt~~y~aPE~~~~~~~~~~~~DvwSlGvil~ell~G~~pf~~~~~~~~~~~i~~~~g~p~~~-- 362 (492)
....... .....++..|+|||++.+. .++.++|||||||++|+|+++..|+..... .. .+..+....+
T Consensus 158 ~~~~~~~~~~~~~~~~~~~~y~apE~~~~~-~~~~~~Di~slG~il~ellt~~~~~~~~~~--~~---~~~~~~~~~~~~ 231 (284)
T cd05079 158 AIETDKEYYTVKDDLDSPVFWYAPECLIQS-KFYIASDVWSFGVTLYELLTYCDSESSPMT--LF---LKMIGPTHGQMT 231 (284)
T ss_pred ccccCccceeecCCCCCCccccCHHHhccC-CCCccccchhhhhhhhhhhcCCCCCccccc--hh---hhhccccccccc
Confidence 6643321 1234567789999998654 488999999999999999998876533211 11 1111110000
Q ss_pred ---HHhhcCCCCcccCCCcccCCCcccccCCCCChhHhhhhccccccCCCCcCCHHHhhC
Q 011138 363 ---EIKCMNPNYTEFKFPQIKAHPWHKIFHKRMPPEALDLVSRLLQYSPSLRCTALEACA 419 (492)
Q Consensus 363 ---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~Li~~~L~~dP~~R~t~~e~l~ 419 (492)
.+..... .... ..+..++.++.+||.+||+.||.+||++.++++
T Consensus 232 ~~~~~~~~~~---~~~~----------~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~il~ 278 (284)
T cd05079 232 VTRLVRVLEE---GKRL----------PRPPNCPEEVYQLMRKCWEFQPSKRTTFQNLIE 278 (284)
T ss_pred HHHHHHHHHc---CccC----------CCCCCCCHHHHHHHHHHccCCcccCcCHHHHHH
Confidence 0000000 0000 112357899999999999999999999999986
No 369
>cd05056 PTKc_FAK Catalytic domain of the Protein Tyrosine Kinase, Focal Adhesion Kinase. Protein Tyrosine Kinase (PTK) family; Focal Adhesion Kinase (FAK); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FAK is a cytoplasmic (or nonreceptor) tyr kinase that contains an autophosphorylation site and a FERM domain at the N-terminus, a central tyr kinase domain, proline-rich regions, and a C-terminal FAT (focal adhesion targeting) domain. FAK activity is dependent on integrin-mediated cell adhesion, which facilitates N-terminal autophosphorylation. Full activation is achieved by the phosphorylation of its two adjacent A-loop tyrosines. FAK is important in mediating signaling initiated at sites of cell adhesions
Probab=100.00 E-value=8.9e-37 Score=296.45 Aligned_cols=243 Identities=27% Similarity=0.362 Sum_probs=189.3
Q ss_pred cceeEeeeeccCCceEEEEEEEcCC---CCEEEEEEeccch-----hhHHHHHHHHHHcCCCCccccceeeeeccCCCce
Q 011138 137 ISYMAERVVGTGSFGVVFQAKCLET---GDSVAIKKVLQDK-----RYKNRELQIMRLLNHPNVVSLKHCFFSTTEKDEL 208 (492)
Q Consensus 137 ~~y~~~~~lG~G~fg~Vy~~~~~~~---g~~vAiK~~~~~~-----~~~~~E~~il~~l~h~nIv~l~~~~~~~~~~~~~ 208 (492)
.+|.+.+.||+|+||.||+|.+... ...||||...... ....+|+.+++.++||||+++++++. +.
T Consensus 6 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~v~ik~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~-----~~- 79 (270)
T cd05056 6 EDITLGRCIGEGQFGDVYQGVYMSPENEKIAVAVKTCKNCTSPSVREKFLQEAYIMRQFDHPHIVKLIGVIT-----EN- 79 (270)
T ss_pred hhceeeeeeCCccceeEEEEEEecCCCCCcceEEEecCCcCCHHHHHHHHHHHHHHHhCCCCchhceeEEEc-----CC-
Confidence 3588999999999999999987544 3468999875432 23557999999999999999999773 22
Q ss_pred EEEEEeeechhh-HHHHhhhhhhcCCCcCHHHHHHHHHHHHHHHHHHHhhCCcccCCCCCCceEEcCCCCcEEEeeecCc
Q 011138 209 YLNLVLEYISET-VYRVSKHYTRMNQHVPILYVQLYTYQICRALNYLHHVVGVCHRDIKPQNLLVNPHTHQLKICDFGSA 287 (492)
Q Consensus 209 ~~~lV~E~~~~~-l~~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~yLH~~~givHrDlKp~NILl~~~~~~vkL~DFG~a 287 (492)
..++||||+.++ +.+.+.. ....+++..+..++.||+.||.|||+ .|++||||||+|||++.++ .+||+|||++
T Consensus 80 ~~~lv~e~~~~~~L~~~l~~---~~~~~~~~~~~~~~~~l~~~l~~lH~-~~~~H~dl~p~nili~~~~-~~~l~d~g~~ 154 (270)
T cd05056 80 PVWIVMELAPLGELRSYLQV---NKYSLDLASLILYSYQLSTALAYLES-KRFVHRDIAARNVLVSSPD-CVKLGDFGLS 154 (270)
T ss_pred CcEEEEEcCCCCcHHHHHHh---CCCCCCHHHHHHHHHHHHHHHHHHHh-CCeeccccChheEEEecCC-CeEEccCcee
Confidence 357999999854 4444322 23458899999999999999999997 9999999999999999877 7999999999
Q ss_pred cccCCCCCC--ccceeccCccCchhhcCCCCCCcchhhHHHHHHHHHHHh-CCCCCCCCChHHHHHHHHHHhCCCCHHHH
Q 011138 288 KMLVPGEPN--ISYICSRYYRAPELIFGATEYTTAIDMWSIGCVLAELLL-GQPLFPGESGVDQLVEIIKILGTPTREEI 364 (492)
Q Consensus 288 ~~~~~~~~~--~~~~gt~~y~aPE~~~~~~~~~~~~DvwSlGvil~ell~-G~~pf~~~~~~~~~~~i~~~~g~p~~~~~ 364 (492)
+........ ....++..|+|||.+.+. .++.++|||||||++|+|++ |..||.+.+..+....+....
T Consensus 155 ~~~~~~~~~~~~~~~~~~~y~aPE~~~~~-~~~~~~Di~slG~il~el~~~g~~pf~~~~~~~~~~~~~~~~-------- 225 (270)
T cd05056 155 RYLEDESYYKASKGKLPIKWMAPESINFR-RFTSASDVWMFGVCMWEILMLGVKPFQGVKNNDVIGRIENGE-------- 225 (270)
T ss_pred eecccccceecCCCCccccccChhhhccC-CCCchhhhHHHHHHHHHHHHcCCCCCCCCCHHHHHHHHHcCC--------
Confidence 765433211 122335679999998544 58999999999999999996 999998877665554432210
Q ss_pred hhcCCCCcccCCCcccCCCcccccCCCCChhHhhhhccccccCCCCcCCHHHhhC
Q 011138 365 KCMNPNYTEFKFPQIKAHPWHKIFHKRMPPEALDLVSRLLQYSPSLRCTALEACA 419 (492)
Q Consensus 365 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~Li~~~L~~dP~~R~t~~e~l~ 419 (492)
.. ..+..++.++.+||.+||..+|.+|||+.+++.
T Consensus 226 ----------~~----------~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~~~~ 260 (270)
T cd05056 226 ----------RL----------PMPPNCPPTLYSLMTKCWAYDPSKRPRFTELKA 260 (270)
T ss_pred ----------cC----------CCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHH
Confidence 00 012357889999999999999999999999875
No 370
>PF07714 Pkinase_Tyr: Protein tyrosine kinase Protein kinase; unclassified specificity. Tyrosine kinase, catalytic domain; InterPro: IPR001245 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases. Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. Tyrosine-protein kinases can transfer a phosphate group from ATP to a tyrosine residue in a protein. These enzymes can be divided into two main groups []: Receptor tyrosine kinases (RTK), which are transmembrane proteins involved in signal transduction; they play key roles in growth, differentiation, metabolism, adhesion, motility, death and oncogenesis []. RTKs are composed of 3 domains: an extracellular domain (binds ligand), a transmembrane (TM) domain, and an intracellular catalytic domain (phosphorylates substrate). The TM domain plays an important role in the dimerisation process necessary for signal transduction []. Cytoplasmic / non-receptor tyrosine kinases, which act as regulatory proteins, playing key roles in cell differentiation, motility, proliferation, and survival. For example, the Src-family of protein-tyrosine kinases []. ; GO: 0004672 protein kinase activity, 0006468 protein phosphorylation; PDB: 2HYY_C 1OPL_A 2V7A_A 2G2H_B 2G1T_A 3PYY_A 3CS9_D 2HZI_A 2E2B_A 2HIW_A ....
Probab=100.00 E-value=2e-37 Score=299.62 Aligned_cols=242 Identities=26% Similarity=0.373 Sum_probs=184.6
Q ss_pred eEeeeeccCCceEEEEEEEc----CCCCEEEEEEeccc-----hhhHHHHHHHHHHcCCCCccccceeeeeccCCCceEE
Q 011138 140 MAERVVGTGSFGVVFQAKCL----ETGDSVAIKKVLQD-----KRYKNRELQIMRLLNHPNVVSLKHCFFSTTEKDELYL 210 (492)
Q Consensus 140 ~~~~~lG~G~fg~Vy~~~~~----~~g~~vAiK~~~~~-----~~~~~~E~~il~~l~h~nIv~l~~~~~~~~~~~~~~~ 210 (492)
.+.+.||.|.||.||+|... ..+..|+||.+... ...+.+|+++++.++||||+++++++.... ..
T Consensus 2 ~~~~~ig~G~fg~v~~~~~~~~~~~~~~~V~vk~~~~~~~~~~~~~~~~e~~~l~~l~h~ni~~~~g~~~~~~-----~~ 76 (259)
T PF07714_consen 2 KLIKQIGEGSFGKVYRAEWKQKDNDKNQPVAVKILKPSSSEEEEEEFLNEIQILRKLRHPNIVKLYGFCIENE-----PL 76 (259)
T ss_dssp EEEEEEEEESSEEEEEEEEESTTTSSEEEEEEEEESTTSSHHHHHHHHHHHHHHHTHSBTTBE-EEEEEESSS-----SE
T ss_pred EEeeEEccCCCcEEEEEEEEcccCCCCEEEEEEEeccccccccceeeeecccccccccccccccccccccccc-----cc
Confidence 35678999999999999987 44678999998432 234567999999999999999999986322 27
Q ss_pred EEEeeechh-hHHHHhhhhhhcCCCcCHHHHHHHHHHHHHHHHHHHhhCCcccCCCCCCceEEcCCCCcEEEeeecCccc
Q 011138 211 NLVLEYISE-TVYRVSKHYTRMNQHVPILYVQLYTYQICRALNYLHHVVGVCHRDIKPQNLLVNPHTHQLKICDFGSAKM 289 (492)
Q Consensus 211 ~lV~E~~~~-~l~~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~yLH~~~givHrDlKp~NILl~~~~~~vkL~DFG~a~~ 289 (492)
++||||+.+ .|.+.+... ....++...+..++.||+.||.|||+ ++|+|+||++.|||++.++ .+||+|||++..
T Consensus 77 ~lv~e~~~~g~L~~~L~~~--~~~~~~~~~~~~i~~~i~~~l~~Lh~-~~iiH~~l~~~nill~~~~-~~Kl~~f~~~~~ 152 (259)
T PF07714_consen 77 FLVMEYCPGGSLDDYLKSK--NKEPLSEQQRLSIAIQIAEALSYLHS-NNIIHGNLSPSNILLDSNG-QVKLSDFGLSRP 152 (259)
T ss_dssp EEEEE--TTEBHHHHHHHT--CTTTSBHHHHHHHHHHHHHHHHHHHH-TTEEEST-SGGGEEEETTT-EEEEESTTTGEE
T ss_pred ccccccccccccccccccc--cccccccccccccccccccccccccc-ccccccccccccccccccc-cccccccccccc
Confidence 899999985 455544332 24568899999999999999999997 8999999999999999888 899999999986
Q ss_pred cCCCCC---CccceeccCccCchhhcCCCCCCcchhhHHHHHHHHHHHh-CCCCCCCCChHHHHHHHHHHhCCCCHHHHh
Q 011138 290 LVPGEP---NISYICSRYYRAPELIFGATEYTTAIDMWSIGCVLAELLL-GQPLFPGESGVDQLVEIIKILGTPTREEIK 365 (492)
Q Consensus 290 ~~~~~~---~~~~~gt~~y~aPE~~~~~~~~~~~~DvwSlGvil~ell~-G~~pf~~~~~~~~~~~i~~~~g~p~~~~~~ 365 (492)
...... .....+...|+|||.+.+.. ++.++||||||+++|||++ |+.||...+..+....+.+..
T Consensus 153 ~~~~~~~~~~~~~~~~~~~~aPE~~~~~~-~~~ksDVysfG~~l~ei~~~~~~p~~~~~~~~~~~~~~~~~--------- 222 (259)
T PF07714_consen 153 ISEKSKYKNDSSQQLPLRYLAPEVLKDGE-YTKKSDVYSFGMLLYEILTLGKFPFSDYDNEEIIEKLKQGQ--------- 222 (259)
T ss_dssp TTTSSSEEESTTSESGGGGS-HHHHHHSE-ESHHHHHHHHHHHHHHHHTTSSGTTTTSCHHHHHHHHHTTE---------
T ss_pred ccccccccccccccccccccccccccccc-ccccccccccccccccccccccccccccccccccccccccc---------
Confidence 622211 12345678899999996654 8999999999999999999 789998887666555552210
Q ss_pred hcCCCCcccCCCcccCCCcccccCCCCChhHhhhhccccccCCCCcCCHHHhhC
Q 011138 366 CMNPNYTEFKFPQIKAHPWHKIFHKRMPPEALDLVSRLLQYSPSLRCTALEACA 419 (492)
Q Consensus 366 ~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~Li~~~L~~dP~~R~t~~e~l~ 419 (492)
.. ..+..++..+.++|.+||..||.+||++.++++
T Consensus 223 -------~~------------~~~~~~~~~~~~li~~C~~~~p~~RPs~~~i~~ 257 (259)
T PF07714_consen 223 -------RL------------PIPDNCPKDIYSLIQQCWSHDPEKRPSFQEILQ 257 (259)
T ss_dssp -------ET------------TSBTTSBHHHHHHHHHHT-SSGGGS--HHHHHH
T ss_pred -------cc------------eeccchhHHHHHHHHHHcCCChhhCcCHHHHHh
Confidence 00 012357889999999999999999999999874
No 371
>KOG0194 consensus Protein tyrosine kinase [Signal transduction mechanisms]
Probab=100.00 E-value=8.3e-38 Score=315.73 Aligned_cols=246 Identities=26% Similarity=0.343 Sum_probs=192.6
Q ss_pred cceeEeeeeccCCceEEEEEEEcCCCC---E-EEEEEeccc-------hhhHHHHHHHHHHcCCCCccccceeeeeccCC
Q 011138 137 ISYMAERVVGTGSFGVVFQAKCLETGD---S-VAIKKVLQD-------KRYKNRELQIMRLLNHPNVVSLKHCFFSTTEK 205 (492)
Q Consensus 137 ~~y~~~~~lG~G~fg~Vy~~~~~~~g~---~-vAiK~~~~~-------~~~~~~E~~il~~l~h~nIv~l~~~~~~~~~~ 205 (492)
.+-.+.++||+|+||.||+|..+..+. . ||+|....+ ....-+|+++|++++|||||++||+...
T Consensus 157 ~~v~l~kkLGeGaFGeV~~G~l~~~~~~~~~~VAvK~~k~~~~~~~~~~~e~m~EArvMr~l~H~NVVr~yGVa~~---- 232 (474)
T KOG0194|consen 157 SDIELGKKLGEGAFGEVFKGKLKLKNGFKVVPVAVKTTKGSSELTKEQIKEFMKEARVMRQLNHPNVVRFYGVAVL---- 232 (474)
T ss_pred cCccccceeecccccEEEEEEEEecCCceeeeeEEEeecccccccHHHHHHHHHHHHHHHhCCCCCEEEEEEEEcC----
Confidence 345566899999999999998765432 3 899987632 1233479999999999999999998843
Q ss_pred CceEEEEEeeechhhHHHHhhhhhhcCCCcCHHHHHHHHHHHHHHHHHHHhhCCcccCCCCCCceEEcCCCCcEEEeeec
Q 011138 206 DELYLNLVLEYISETVYRVSKHYTRMNQHVPILYVQLYTYQICRALNYLHHVVGVCHRDIKPQNLLVNPHTHQLKICDFG 285 (492)
Q Consensus 206 ~~~~~~lV~E~~~~~l~~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~yLH~~~givHrDlKp~NILl~~~~~~vkL~DFG 285 (492)
..-++||||+|.|+.+. .+.......++..+...++.+.+.||+|||+ +++|||||-..|+|++.++ .+||+|||
T Consensus 233 -~~Pl~ivmEl~~gGsL~--~~L~k~~~~v~~~ek~~~~~~AA~Gl~YLh~-k~~IHRDIAARNcL~~~~~-~vKISDFG 307 (474)
T KOG0194|consen 233 -EEPLMLVMELCNGGSLD--DYLKKNKKSLPTLEKLRFCYDAARGLEYLHS-KNCIHRDIAARNCLYSKKG-VVKISDFG 307 (474)
T ss_pred -CCccEEEEEecCCCcHH--HHHHhCCCCCCHHHHHHHHHHHHhHHHHHHH-CCCcchhHhHHHheecCCC-eEEeCccc
Confidence 33489999999986443 2333333469999999999999999999997 9999999999999999877 68999999
Q ss_pred CccccCCCCCCc-cceeccCccCchhhcCCCCCCcchhhHHHHHHHHHHHh-CCCCCCCCChHHHHHHHHHHhCCCCHHH
Q 011138 286 SAKMLVPGEPNI-SYICSRYYRAPELIFGATEYTTAIDMWSIGCVLAELLL-GQPLFPGESGVDQLVEIIKILGTPTREE 363 (492)
Q Consensus 286 ~a~~~~~~~~~~-~~~gt~~y~aPE~~~~~~~~~~~~DvwSlGvil~ell~-G~~pf~~~~~~~~~~~i~~~~g~p~~~~ 363 (492)
+++......... ..--...|+|||.+... .|+.++|||||||++||+++ |..||.+....+....|...
T Consensus 308 Ls~~~~~~~~~~~~~klPirWLAPEtl~~~-~~s~kTDV~sfGV~~~Eif~~g~~Py~g~~~~~v~~kI~~~-------- 378 (474)
T KOG0194|consen 308 LSRAGSQYVMKKFLKKLPIRWLAPETLNTG-IFSFKTDVWSFGVLLWEIFENGAEPYPGMKNYEVKAKIVKN-------- 378 (474)
T ss_pred cccCCcceeeccccccCcceecChhhhccC-ccccccchhheeeeEEeeeccCCCCCCCCCHHHHHHHHHhc--------
Confidence 987543111111 11235679999999654 69999999999999999997 89999999988777777441
Q ss_pred HhhcCCCCcccCCCcccCCCcccccCCCCChhHhhhhccccccCCCCcCCHHHhhC
Q 011138 364 IKCMNPNYTEFKFPQIKAHPWHKIFHKRMPPEALDLVSRLLQYSPSLRCTALEACA 419 (492)
Q Consensus 364 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~Li~~~L~~dP~~R~t~~e~l~ 419 (492)
.+ ....+...+.++..++.+|+..||++|+++.++.+
T Consensus 379 ---------~~----------r~~~~~~~p~~~~~~~~~c~~~~p~~R~tm~~i~~ 415 (474)
T KOG0194|consen 379 ---------GY----------RMPIPSKTPKELAKVMKQCWKKDPEDRPTMSTIKK 415 (474)
T ss_pred ---------Cc----------cCCCCCCCHHHHHHHHHHhccCChhhccCHHHHHH
Confidence 11 11122356889999999999999999999998875
No 372
>cd05073 PTKc_Hck Catalytic domain of the Protein Tyrosine Kinase, Hematopoietic cell kinase. Protein Tyrosine Kinase (PTK) family; Hematopoietic cell kinase (Hck); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Hck is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pa
Probab=100.00 E-value=1.3e-36 Score=293.73 Aligned_cols=243 Identities=23% Similarity=0.362 Sum_probs=189.7
Q ss_pred cceeEeeeeccCCceEEEEEEEcCCCCEEEEEEeccch---hhHHHHHHHHHHcCCCCccccceeeeeccCCCceEEEEE
Q 011138 137 ISYMAERVVGTGSFGVVFQAKCLETGDSVAIKKVLQDK---RYKNRELQIMRLLNHPNVVSLKHCFFSTTEKDELYLNLV 213 (492)
Q Consensus 137 ~~y~~~~~lG~G~fg~Vy~~~~~~~g~~vAiK~~~~~~---~~~~~E~~il~~l~h~nIv~l~~~~~~~~~~~~~~~~lV 213 (492)
.+|.+.+.||+|+||.||++.+. .+..+|+|.+.... ....+|+.+++.++|+||+++++++.. ...++|
T Consensus 6 ~~~~~~~~lg~g~~~~vy~~~~~-~~~~~~iK~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~------~~~~~v 78 (260)
T cd05073 6 ESLKLEKKLGAGQFGEVWMATYN-KHTKVAVKTMKPGSMSVEAFLAEANVMKTLQHDKLVKLHAVVTK------EPIYII 78 (260)
T ss_pred cceeEEeEecCccceEEEEEEec-CCccEEEEecCCChhHHHHHHHHHHHHHhcCCCCcceEEEEEcC------CCeEEE
Confidence 46999999999999999999854 56679999886543 345579999999999999999888732 347899
Q ss_pred eeechh-hHHHHhhhhhhcCCCcCHHHHHHHHHHHHHHHHHHHhhCCcccCCCCCCceEEcCCCCcEEEeeecCccccCC
Q 011138 214 LEYISE-TVYRVSKHYTRMNQHVPILYVQLYTYQICRALNYLHHVVGVCHRDIKPQNLLVNPHTHQLKICDFGSAKMLVP 292 (492)
Q Consensus 214 ~E~~~~-~l~~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~yLH~~~givHrDlKp~NILl~~~~~~vkL~DFG~a~~~~~ 292 (492)
|||+++ ++.+.+... ....+++..+..++.||+.||.|||+ .|++||||||+||+++.++ .+||+|||++.....
T Consensus 79 ~e~~~~~~L~~~~~~~--~~~~~~~~~~~~~~~~l~~aL~~lH~-~~i~H~dl~p~ni~i~~~~-~~~l~d~~~~~~~~~ 154 (260)
T cd05073 79 TEFMAKGSLLDFLKSD--EGSKQPLPKLIDFSAQIAEGMAFIEQ-RNYIHRDLRAANILVSASL-VCKIADFGLARVIED 154 (260)
T ss_pred EEeCCCCcHHHHHHhC--CccccCHHHHHHHHHHHHHHHHHHHh-CCccccccCcceEEEcCCC-cEEECCCcceeeccC
Confidence 999975 555544321 23457788889999999999999997 9999999999999999877 899999999876533
Q ss_pred CCC--CccceeccCccCchhhcCCCCCCcchhhHHHHHHHHHHHh-CCCCCCCCChHHHHHHHHHHhCCCCHHHHhhcCC
Q 011138 293 GEP--NISYICSRYYRAPELIFGATEYTTAIDMWSIGCVLAELLL-GQPLFPGESGVDQLVEIIKILGTPTREEIKCMNP 369 (492)
Q Consensus 293 ~~~--~~~~~gt~~y~aPE~~~~~~~~~~~~DvwSlGvil~ell~-G~~pf~~~~~~~~~~~i~~~~g~p~~~~~~~~~~ 369 (492)
... .....++..|+|||++.+. .++.++|+|||||++|+|++ |..||.+.+..+....+...
T Consensus 155 ~~~~~~~~~~~~~~y~~PE~~~~~-~~~~~~Di~slG~~l~~l~t~g~~p~~~~~~~~~~~~~~~~-------------- 219 (260)
T cd05073 155 NEYTAREGAKFPIKWTAPEAINFG-SFTIKSDVWSFGILLMEIVTYGRIPYPGMSNPEVIRALERG-------------- 219 (260)
T ss_pred CCcccccCCcccccccCHhHhccC-CcCccccchHHHHHHHHHHhcCCCCCCCCCHHHHHHHHhCC--------------
Confidence 221 1123456779999998654 48999999999999999998 99999887655444333221
Q ss_pred CCcccCCCcccCCCcccccCCCCChhHhhhhccccccCCCCcCCHHHhhC
Q 011138 370 NYTEFKFPQIKAHPWHKIFHKRMPPEALDLVSRLLQYSPSLRCTALEACA 419 (492)
Q Consensus 370 ~~~~~~~~~~~~~~~~~~~~~~~s~~~~~Li~~~L~~dP~~R~t~~e~l~ 419 (492)
+..+ ....++.++.+++.+||+.||++||++.+++.
T Consensus 220 ----~~~~----------~~~~~~~~~~~~i~~~l~~~p~~Rp~~~~l~~ 255 (260)
T cd05073 220 ----YRMP----------RPENCPEELYNIMMRCWKNRPEERPTFEYIQS 255 (260)
T ss_pred ----CCCC----------CcccCCHHHHHHHHHHcccCcccCcCHHHHHH
Confidence 0000 11346889999999999999999999988763
No 373
>cd05058 PTKc_Met_Ron Catalytic domain of the Protein Tyrosine Kinases, Met and Ron. Protein Tyrosine Kinase (PTK) family; Met and Ron; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Met and Ron are receptor tyr kinases (RTKs) composed of an alpha-beta heterodimer. The extracellular alpha chain is disulfide linked to the beta chain, which contains an extracellular ligand-binding region with a sema domain, a PSI domain and four IPT repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Met binds to the ligand, hepatocyte growth factor/scatter factor (HGF/SF), and is also ca
Probab=100.00 E-value=5.1e-37 Score=296.58 Aligned_cols=239 Identities=23% Similarity=0.352 Sum_probs=178.7
Q ss_pred eeeccCCceEEEEEEEcC---CCCEEEEEEeccc-----hhhHHHHHHHHHHcCCCCccccceeeeeccCCCceEEEEEe
Q 011138 143 RVVGTGSFGVVFQAKCLE---TGDSVAIKKVLQD-----KRYKNRELQIMRLLNHPNVVSLKHCFFSTTEKDELYLNLVL 214 (492)
Q Consensus 143 ~~lG~G~fg~Vy~~~~~~---~g~~vAiK~~~~~-----~~~~~~E~~il~~l~h~nIv~l~~~~~~~~~~~~~~~~lV~ 214 (492)
+.||+|+||.||+|.+.. .+..||||.+... .....+|+.+++.++||||+++++++.. .....++||
T Consensus 1 ~~lg~g~~g~v~~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~----~~~~~~lv~ 76 (262)
T cd05058 1 RVIGKGHFGCVYHGTLIDSDGQKIHCAVKSLNRITDLEEVEQFLKEGIIMKDFSHPNVLSLLGICLP----SEGSPLVVL 76 (262)
T ss_pred CcccccCCceEEEEEEecCCCceEEEEEEecCccCCHHHHHHHHHHHHHHccCCCCCcceEEEEeec----CCCCcEEEE
Confidence 368999999999998754 3457999987432 1234579999999999999999986642 223467999
Q ss_pred eechhh-HHHHhhhhhhcCCCcCHHHHHHHHHHHHHHHHHHHhhCCcccCCCCCCceEEcCCCCcEEEeeecCccccCCC
Q 011138 215 EYISET-VYRVSKHYTRMNQHVPILYVQLYTYQICRALNYLHHVVGVCHRDIKPQNLLVNPHTHQLKICDFGSAKMLVPG 293 (492)
Q Consensus 215 E~~~~~-l~~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~yLH~~~givHrDlKp~NILl~~~~~~vkL~DFG~a~~~~~~ 293 (492)
||+.++ +...+. ......++..+..++.||+.||.|||+ .||+||||||+|||++.++ .+||+|||+++.....
T Consensus 77 e~~~~~~L~~~~~---~~~~~~~~~~~~~~~~~i~~~l~~lH~-~~i~H~dlk~~nili~~~~-~~kl~dfg~~~~~~~~ 151 (262)
T cd05058 77 PYMKHGDLRNFIR---SETHNPTVKDLIGFGLQVAKGMEYLAS-KKFVHRDLAARNCMLDESF-TVKVADFGLARDIYDK 151 (262)
T ss_pred ecCCCCCHHHHHH---hcCCCCCHHHHHHHHHHHHHHHHHHHh-CCccccccCcceEEEcCCC-cEEECCccccccccCC
Confidence 999854 444332 222345667778899999999999997 8999999999999999887 7999999998754322
Q ss_pred C-----CCccceeccCccCchhhcCCCCCCcchhhHHHHHHHHHHHh-CCCCCCCCChHHHHHHHHHHhCCCCHHHHhhc
Q 011138 294 E-----PNISYICSRYYRAPELIFGATEYTTAIDMWSIGCVLAELLL-GQPLFPGESGVDQLVEIIKILGTPTREEIKCM 367 (492)
Q Consensus 294 ~-----~~~~~~gt~~y~aPE~~~~~~~~~~~~DvwSlGvil~ell~-G~~pf~~~~~~~~~~~i~~~~g~p~~~~~~~~ 367 (492)
. ......++..|+|||.+.+. .++.++|||||||++|||++ |.+||...+..+....+... .
T Consensus 152 ~~~~~~~~~~~~~~~~y~aPE~~~~~-~~~~~~Di~slG~~l~el~~~~~~~~~~~~~~~~~~~~~~~--~--------- 219 (262)
T cd05058 152 EYYSVHNHTGAKLPVKWMALESLQTQ-KFTTKSDVWSFGVLLWELMTRGAPPYPDVDSFDITVYLLQG--R--------- 219 (262)
T ss_pred cceeecccccCcCCccccChhHhccC-ccchHHHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHhcC--C---------
Confidence 1 11123456789999998654 48999999999999999999 57778766554433322110 0
Q ss_pred CCCCcccCCCcccCCCcccccCCCCChhHhhhhccccccCCCCcCCHHHhhC
Q 011138 368 NPNYTEFKFPQIKAHPWHKIFHKRMPPEALDLVSRLLQYSPSLRCTALEACA 419 (492)
Q Consensus 368 ~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~Li~~~L~~dP~~R~t~~e~l~ 419 (492)
... .+..+++.+.+++.+||..+|++||++.+++.
T Consensus 220 -----~~~------------~~~~~~~~~~~li~~cl~~~p~~Rp~~~~il~ 254 (262)
T cd05058 220 -----RLL------------QPEYCPDPLYEVMLSCWHPKPEMRPTFSELVS 254 (262)
T ss_pred -----CCC------------CCCcCCHHHHHHHHHHcCCChhhCCCHHHHHH
Confidence 000 11235788999999999999999999999975
No 374
>cd05083 PTKc_Chk Catalytic domain of the Protein Tyrosine Kinase, Csk homologous kinase. Protein Tyrosine Kinase (PTK) family; Csk homologous kinase (Chk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. Chk is also referred to as megakaryocyte-associated tyrosine kinase (Matk). To inhibit Src kinases, Chk is translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Chk inhibit Src ki
Probab=100.00 E-value=6.6e-37 Score=294.62 Aligned_cols=240 Identities=23% Similarity=0.360 Sum_probs=188.6
Q ss_pred cceeEeeeeccCCceEEEEEEEcCCCCEEEEEEeccc--hhhHHHHHHHHHHcCCCCccccceeeeeccCCCceEEEEEe
Q 011138 137 ISYMAERVVGTGSFGVVFQAKCLETGDSVAIKKVLQD--KRYKNRELQIMRLLNHPNVVSLKHCFFSTTEKDELYLNLVL 214 (492)
Q Consensus 137 ~~y~~~~~lG~G~fg~Vy~~~~~~~g~~vAiK~~~~~--~~~~~~E~~il~~l~h~nIv~l~~~~~~~~~~~~~~~~lV~ 214 (492)
.+|.+.+.||+|+||.||++.. +++.||+|.+..+ .....+|+.+++.++||||+++++++.. . ..++||
T Consensus 6 ~~~~~~~~lg~g~~g~v~~~~~--~~~~~~iK~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~-----~-~~~~v~ 77 (254)
T cd05083 6 QKLTLGEIIGEGEFGAVLQGEY--TGQKVAVKNIKCDVTAQAFLEETAVMTKLHHKNLVRLLGVILH-----N-GLYIVM 77 (254)
T ss_pred HHceeeeeeccCCCCceEeccc--CCCceEEEeecCcchHHHHHHHHHHHHhCCCCCcCeEEEEEcC-----C-CcEEEE
Confidence 4699999999999999999864 7889999988543 2345679999999999999999988732 1 257999
Q ss_pred eechh-hHHHHhhhhhhcCCCcCHHHHHHHHHHHHHHHHHHHhhCCcccCCCCCCceEEcCCCCcEEEeeecCccccCCC
Q 011138 215 EYISE-TVYRVSKHYTRMNQHVPILYVQLYTYQICRALNYLHHVVGVCHRDIKPQNLLVNPHTHQLKICDFGSAKMLVPG 293 (492)
Q Consensus 215 E~~~~-~l~~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~yLH~~~givHrDlKp~NILl~~~~~~vkL~DFG~a~~~~~~ 293 (492)
||+.+ .+...+... ....+++..+..++.|++.||.|||+ .|++||||||+||+++.++ .+||+|||++......
T Consensus 78 e~~~~~~L~~~l~~~--~~~~~~~~~~~~~~~qi~~al~~lH~-~~~~H~dl~p~nili~~~~-~~kl~Dfg~~~~~~~~ 153 (254)
T cd05083 78 ELMSKGNLVNFLRTR--GRALVSVIQLLQFSLDVAEGMEYLES-KKLVHRDLAARNILVSEDG-VAKVSDFGLARVGSMG 153 (254)
T ss_pred ECCCCCCHHHHHHhc--CcCCCCHHHHHHHHHHHHHHHHHHHh-CCeeccccCcceEEEcCCC-cEEECCCccceecccc
Confidence 99985 555544321 23457888899999999999999997 9999999999999999887 7999999998754322
Q ss_pred CCCccceeccCccCchhhcCCCCCCcchhhHHHHHHHHHHHh-CCCCCCCCChHHHHHHHHHHhCCCCHHHHhhcCCCCc
Q 011138 294 EPNISYICSRYYRAPELIFGATEYTTAIDMWSIGCVLAELLL-GQPLFPGESGVDQLVEIIKILGTPTREEIKCMNPNYT 372 (492)
Q Consensus 294 ~~~~~~~gt~~y~aPE~~~~~~~~~~~~DvwSlGvil~ell~-G~~pf~~~~~~~~~~~i~~~~g~p~~~~~~~~~~~~~ 372 (492)
......+..|+|||.+.+. .++.++|+|||||++|+|++ |++||...+..+....+.+.
T Consensus 154 --~~~~~~~~~y~~pe~~~~~-~~~~~~Dv~slG~~l~el~~~g~~p~~~~~~~~~~~~~~~~----------------- 213 (254)
T cd05083 154 --VDNSKLPVKWTAPEALKHK-KFSSKSDVWSYGVLLWEVFSYGRAPYPKMSLKEVKECVEKG----------------- 213 (254)
T ss_pred --CCCCCCCceecCHHHhccC-CcCchhhHHHHHHHHHHHHhCCCCCCccCCHHHHHHHHhCC-----------------
Confidence 1223445679999998654 48899999999999999997 99999877654433332210
Q ss_pred ccCCCcccCCCcccccCCCCChhHhhhhccccccCCCCcCCHHHhhC
Q 011138 373 EFKFPQIKAHPWHKIFHKRMPPEALDLVSRLLQYSPSLRCTALEACA 419 (492)
Q Consensus 373 ~~~~~~~~~~~~~~~~~~~~s~~~~~Li~~~L~~dP~~R~t~~e~l~ 419 (492)
+..+ ....+++.+.+|+.+||..+|.+||++.+++.
T Consensus 214 -~~~~----------~~~~~~~~~~~li~~~l~~~p~~Rp~~~~l~~ 249 (254)
T cd05083 214 -YRME----------PPEGCPADVYVLMTSCWETEPKKRPSFHKLRE 249 (254)
T ss_pred -CCCC----------CCCcCCHHHHHHHHHHcCCChhhCcCHHHHHH
Confidence 0000 11346889999999999999999999999875
No 375
>KOG1026 consensus Nerve growth factor receptor TRKA and related tyrosine kinases [Signal transduction mechanisms; Intracellular trafficking, secretion, and vesicular transport]
Probab=100.00 E-value=9.5e-38 Score=325.05 Aligned_cols=245 Identities=24% Similarity=0.348 Sum_probs=197.7
Q ss_pred ceeEeeeeccCCceEEEEEEEcC-----CCCEEEEEEeccc-----hhhHHHHHHHHHHcCCCCccccceeeeeccCCCc
Q 011138 138 SYMAERVVGTGSFGVVFQAKCLE-----TGDSVAIKKVLQD-----KRYKNRELQIMRLLNHPNVVSLKHCFFSTTEKDE 207 (492)
Q Consensus 138 ~y~~~~~lG~G~fg~Vy~~~~~~-----~g~~vAiK~~~~~-----~~~~~~E~~il~~l~h~nIv~l~~~~~~~~~~~~ 207 (492)
+-...+.||+|+||+||+|+... +...||||.++.. ...++||++++..|+|||||+|++++.. .
T Consensus 487 ~i~~~~eLGegaFGkVf~a~~~~l~p~~~~~lVAVK~LKd~a~~~~~~dF~REaeLla~l~H~nIVrLlGVC~~-----~ 561 (774)
T KOG1026|consen 487 DIVFKEELGEGAFGKVFLAEAYGLLPGQDEQLVAVKALKDKAENQARQDFRREAELLAELQHPNIVRLLGVCRE-----G 561 (774)
T ss_pred heeehhhhcCchhhhhhhhhccCCCCCccceehhHhhhcccccHHHHHHHHHHHHHHHhccCCCeEEEEEEEcc-----C
Confidence 45667789999999999998643 3356999988654 3457799999999999999999999943 3
Q ss_pred eEEEEEeeech-hhHHHHhhhhhhc------CC----CcCHHHHHHHHHHHHHHHHHHHhhCCcccCCCCCCceEEcCCC
Q 011138 208 LYLNLVLEYIS-ETVYRVSKHYTRM------NQ----HVPILYVQLYTYQICRALNYLHHVVGVCHRDIKPQNLLVNPHT 276 (492)
Q Consensus 208 ~~~~lV~E~~~-~~l~~~~~~~~~~------~~----~~~~~~~~~i~~qi~~aL~yLH~~~givHrDlKp~NILl~~~~ 276 (492)
.-+|||+|||. |+|..++...... .. .++..+...|+.||+.||.||-+ +.+|||||-..|+||..+.
T Consensus 562 ~P~~MvFEYm~~GDL~eFLra~sP~a~~~~~g~~~~~~L~~~q~L~iA~QIAaGM~YLs~-~~FVHRDLATRNCLVge~l 640 (774)
T KOG1026|consen 562 DPLCMVFEYMDHGDLHEFLRARSPKADKLASGQDTPPPLSTSQFLHIATQIAAGMEYLSS-HHFVHRDLATRNCLVGENL 640 (774)
T ss_pred CeeEEEEEecccccHHHHHHhhCCccccccCCCCCCCCCCHHHHHHHHHHHHHHHHHHHh-Ccccccchhhhhceeccce
Confidence 34899999998 6666665432211 22 37788899999999999999997 8999999999999999888
Q ss_pred CcEEEeeecCccccCCCCCCc---cceeccCccCchhhcCCCCCCcchhhHHHHHHHHHHHh-CCCCCCCCChHHHHHHH
Q 011138 277 HQLKICDFGSAKMLVPGEPNI---SYICSRYYRAPELIFGATEYTTAIDMWSIGCVLAELLL-GQPLFPGESGVDQLVEI 352 (492)
Q Consensus 277 ~~vkL~DFG~a~~~~~~~~~~---~~~gt~~y~aPE~~~~~~~~~~~~DvwSlGvil~ell~-G~~pf~~~~~~~~~~~i 352 (492)
.|||+|||+++.+...+... ...-...|||||.|+-. .|+.++||||+||+|||+++ |..||.+.++.+.+..|
T Consensus 641 -~VKIsDfGLsRdiYssDYYk~~~~t~lPIRWMppEsIly~-kFTteSDVWs~GVvLWEIFsyG~QPy~glSn~EVIe~i 718 (774)
T KOG1026|consen 641 -VVKISDFGLSRDIYSSDYYKVRGNTLLPIRWMPPESILYG-KFTTESDVWSFGVVLWEIFSYGKQPYYGLSNQEVIECI 718 (774)
T ss_pred -EEEecccccchhhhhhhhhcccCCceeeeecCCHHHhhcC-cccchhhhhhhhhhhhhhhccccCcccccchHHHHHHH
Confidence 89999999998764433221 22346789999999755 49999999999999999995 99999999998888777
Q ss_pred HHHhCCCCHHHHhhcCCCCcccCCCcccCCCcccccCCCCChhHhhhhccccccCCCCcCCHHHhh
Q 011138 353 IKILGTPTREEIKCMNPNYTEFKFPQIKAHPWHKIFHKRMPPEALDLVSRLLQYSPSLRCTALEAC 418 (492)
Q Consensus 353 ~~~~g~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~Li~~~L~~dP~~R~t~~e~l 418 (492)
.+. .. ++ .+...|.++.+|+..||+.+|.+||++.||=
T Consensus 719 ~~g-----------------~l-L~----------~Pe~CP~~vY~LM~~CW~~~P~~RPsF~eI~ 756 (774)
T KOG1026|consen 719 RAG-----------------QL-LS----------CPENCPTEVYSLMLECWNENPKRRPSFKEIH 756 (774)
T ss_pred HcC-----------------Cc-cc----------CCCCCCHHHHHHHHHHhhcCcccCCCHHHHH
Confidence 541 00 11 2357899999999999999999999999873
No 376
>cd05110 PTKc_HER4 Catalytic domain of the Protein Tyrosine Kinase, HER4. Protein Tyrosine Kinase (PTK) family; HER4 (ErbB4); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER4 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr residues in the C-terminal tail, which serve as bindin
Probab=100.00 E-value=6.3e-37 Score=302.96 Aligned_cols=244 Identities=23% Similarity=0.332 Sum_probs=187.8
Q ss_pred cceeEeeeeccCCceEEEEEEEcCCCC----EEEEEEeccch-----hhHHHHHHHHHHcCCCCccccceeeeeccCCCc
Q 011138 137 ISYMAERVVGTGSFGVVFQAKCLETGD----SVAIKKVLQDK-----RYKNRELQIMRLLNHPNVVSLKHCFFSTTEKDE 207 (492)
Q Consensus 137 ~~y~~~~~lG~G~fg~Vy~~~~~~~g~----~vAiK~~~~~~-----~~~~~E~~il~~l~h~nIv~l~~~~~~~~~~~~ 207 (492)
..|+..+.||+|+||.||+|.+..+|. .||+|.+.... ....+|+.+++.++||||+++++++...
T Consensus 7 ~~~~~~~~lg~G~~g~vy~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~~~~l~h~niv~~~~~~~~~----- 81 (303)
T cd05110 7 TELKRVKVLGSGAFGTVYKGIWVPEGETVKIPVAIKILNETTGPKANVEFMDEALIMASMDHPHLVRLLGVCLSP----- 81 (303)
T ss_pred hhceeccccccCCCccEEEEEEecCCCcceeeEEEEeccccCCHHHHHHHHHHHHHHHhCCCCCcccEEEEEcCC-----
Confidence 358888999999999999999988876 46888775432 1345799999999999999999987421
Q ss_pred eEEEEEeeechhh-HHHHhhhhhhcCCCcCHHHHHHHHHHHHHHHHHHHhhCCcccCCCCCCceEEcCCCCcEEEeeecC
Q 011138 208 LYLNLVLEYISET-VYRVSKHYTRMNQHVPILYVQLYTYQICRALNYLHHVVGVCHRDIKPQNLLVNPHTHQLKICDFGS 286 (492)
Q Consensus 208 ~~~~lV~E~~~~~-l~~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~yLH~~~givHrDlKp~NILl~~~~~~vkL~DFG~ 286 (492)
..++|+||++++ +.+.+. .....+++..+..++.||+.||.|||+ +||+||||||+|||++.++ .+||+|||+
T Consensus 82 -~~~~v~e~~~~g~l~~~~~---~~~~~~~~~~~~~~~~qi~~~L~~LH~-~~ivH~dikp~Nill~~~~-~~kL~Dfg~ 155 (303)
T cd05110 82 -TIQLVTQLMPHGCLLDYVH---EHKDNIGSQLLLNWCVQIAKGMMYLEE-RRLVHRDLAARNVLVKSPN-HVKITDFGL 155 (303)
T ss_pred -CceeeehhcCCCCHHHHHH---hcccCCCHHHHHHHHHHHHHHHHHHhh-cCeeccccccceeeecCCC-ceEEccccc
Confidence 246899999854 444332 223457888899999999999999997 9999999999999998777 799999999
Q ss_pred ccccCCCCCC---ccceeccCccCchhhcCCCCCCcchhhHHHHHHHHHHHh-CCCCCCCCChHHHHHHHHHHhCCCCHH
Q 011138 287 AKMLVPGEPN---ISYICSRYYRAPELIFGATEYTTAIDMWSIGCVLAELLL-GQPLFPGESGVDQLVEIIKILGTPTRE 362 (492)
Q Consensus 287 a~~~~~~~~~---~~~~gt~~y~aPE~~~~~~~~~~~~DvwSlGvil~ell~-G~~pf~~~~~~~~~~~i~~~~g~p~~~ 362 (492)
++........ ....++..|+|||.+.+. .++.++|||||||++|||++ |..||.+....+ +..++...
T Consensus 156 ~~~~~~~~~~~~~~~~~~~~~y~~PE~~~~~-~~~~~~DiwslG~~l~el~t~g~~p~~~~~~~~-~~~~~~~~------ 227 (303)
T cd05110 156 ARLLEGDEKEYNADGGKMPIKWMALECIHYR-KFTHQSDVWSYGVTIWELMTFGGKPYDGIPTRE-IPDLLEKG------ 227 (303)
T ss_pred cccccCcccccccCCCccccccCCHHHhccC-CCChHHHHHHHHHHHHHHHhCCCCCCCCCCHHH-HHHHHHCC------
Confidence 9865433221 123456789999998654 48999999999999999997 999998765433 23332210
Q ss_pred HHhhcCCCCcccCCCcccCCCcccccCCCCChhHhhhhccccccCCCCcCCHHHhhCC
Q 011138 363 EIKCMNPNYTEFKFPQIKAHPWHKIFHKRMPPEALDLVSRLLQYSPSLRCTALEACAH 420 (492)
Q Consensus 363 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~Li~~~L~~dP~~R~t~~e~l~H 420 (492)
..++ .+...+.++.+++.+||..||++||++.++++.
T Consensus 228 -----------~~~~----------~~~~~~~~~~~li~~c~~~~p~~Rp~~~~l~~~ 264 (303)
T cd05110 228 -----------ERLP----------QPPICTIDVYMVMVKCWMIDADSRPKFKELAAE 264 (303)
T ss_pred -----------CCCC----------CCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHH
Confidence 0000 112357789999999999999999999998773
No 377
>cd05044 PTKc_c-ros Catalytic domain of the Protein Tyrosine Kinase, C-ros. Protein Tyrosine Kinases (PTK) family; C-ros and Drosophila Sevenless proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The proto-oncogene c-ros encodes an orphan receptor tyr kinase (RTK) with an unknown ligand. RTKs contain an extracellular ligand-binding domain, a transmembrane region, and an intracellular tyr kinase domain. RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain. C-ros is expressed in embryonic cells of the kidney, intestine and lung, but disappears soon after birth. It persists only in the adult epididymis. Male
Probab=100.00 E-value=7.8e-37 Score=296.43 Aligned_cols=242 Identities=22% Similarity=0.326 Sum_probs=184.9
Q ss_pred eeeccCCceEEEEEEEcCCC------CEEEEEEeccc-----hhhHHHHHHHHHHcCCCCccccceeeeeccCCCceEEE
Q 011138 143 RVVGTGSFGVVFQAKCLETG------DSVAIKKVLQD-----KRYKNRELQIMRLLNHPNVVSLKHCFFSTTEKDELYLN 211 (492)
Q Consensus 143 ~~lG~G~fg~Vy~~~~~~~g------~~vAiK~~~~~-----~~~~~~E~~il~~l~h~nIv~l~~~~~~~~~~~~~~~~ 211 (492)
+.||+|+||.||+|++...+ +.+|||.+... .....+|+.+++.++||||+++++++. +....+
T Consensus 1 ~~lg~g~~g~vy~~~~~~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~-----~~~~~~ 75 (269)
T cd05044 1 NFLGSGAFGEVYEGTATDILGPGSGPIRVAVKTLRKGATDQEKKEFLKEAHLMSNFNHPNIVKLLGVCL-----LNEPQY 75 (269)
T ss_pred CccccccceeEEeeeecccccCcccceeehhhhhhcccchhhHHHHHHHHHHHHhcCCCCeeeEeeeec-----CCCCeE
Confidence 36999999999999976544 67999987543 234457999999999999999999883 344588
Q ss_pred EEeeechh-hHHHHhhhhhh---cCCCcCHHHHHHHHHHHHHHHHHHHhhCCcccCCCCCCceEEcCCC----CcEEEee
Q 011138 212 LVLEYISE-TVYRVSKHYTR---MNQHVPILYVQLYTYQICRALNYLHHVVGVCHRDIKPQNLLVNPHT----HQLKICD 283 (492)
Q Consensus 212 lV~E~~~~-~l~~~~~~~~~---~~~~~~~~~~~~i~~qi~~aL~yLH~~~givHrDlKp~NILl~~~~----~~vkL~D 283 (492)
+||||+++ .+...+..... ....+++..+..++.||+.||.|||+ .+++|+||||+||+++.++ ..+||+|
T Consensus 76 ~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH~-~~i~H~dl~p~nil~~~~~~~~~~~~~l~d 154 (269)
T cd05044 76 IIMELMEGGDLLSYLRDARVERFGPPLLTLKELLDICLDVAKGCVYLEQ-MHFIHRDLAARNCLVSEKGYDADRVVKIGD 154 (269)
T ss_pred EEEeccCCCcHHHHHHHhhhcccCCccccHHHHHHHHHHHHHHHHHHHh-CCcccCCCChheEEEecCCCCCCcceEECC
Confidence 99999985 44444432211 22347788899999999999999997 8999999999999998654 2699999
Q ss_pred ecCccccCCCCC---CccceeccCccCchhhcCCCCCCcchhhHHHHHHHHHHHh-CCCCCCCCChHHHHHHHHHHhCCC
Q 011138 284 FGSAKMLVPGEP---NISYICSRYYRAPELIFGATEYTTAIDMWSIGCVLAELLL-GQPLFPGESGVDQLVEIIKILGTP 359 (492)
Q Consensus 284 FG~a~~~~~~~~---~~~~~gt~~y~aPE~~~~~~~~~~~~DvwSlGvil~ell~-G~~pf~~~~~~~~~~~i~~~~g~p 359 (492)
||++........ .....++..|+|||.+.+. .++.++|||||||++|+|++ |..||...+..+....+...
T Consensus 155 fg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~-~~~~~~Dv~slG~il~ellt~g~~p~~~~~~~~~~~~~~~~---- 229 (269)
T cd05044 155 FGLARDIYKSDYYRKEGEGLLPVRWMAPESLLDG-KFTTQSDVWSFGVLMWEILTLGQQPYPALNNQEVLQHVTAG---- 229 (269)
T ss_pred cccccccccccccccCcccCCCccccCHHHHccC-CcccchhHHHHHHHHHHHHHcCCCCCcccCHHHHHHHHhcC----
Confidence 999876533221 1223456789999998654 48999999999999999998 99999877665544333210
Q ss_pred CHHHHhhcCCCCcccCCCcccCCCcccccCCCCChhHhhhhccccccCCCCcCCHHHhhC
Q 011138 360 TREEIKCMNPNYTEFKFPQIKAHPWHKIFHKRMPPEALDLVSRLLQYSPSLRCTALEACA 419 (492)
Q Consensus 360 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~Li~~~L~~dP~~R~t~~e~l~ 419 (492)
.... .+..+++++.+||.+||..+|.+||++.++++
T Consensus 230 ------------~~~~------------~~~~~~~~~~~li~~~l~~~p~~Rp~~~~i~~ 265 (269)
T cd05044 230 ------------GRLQ------------KPENCPDKIYQLMTNCWAQDPSERPTFDRIQE 265 (269)
T ss_pred ------------CccC------------CcccchHHHHHHHHHHcCCCcccCCCHHHHHH
Confidence 0000 12346889999999999999999999999864
No 378
>cd05086 PTKc_Aatyk2 Catalytic domain of the Protein Tyrosine Kinase, Apoptosis-associated tyrosine kinase 2. Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase 2 (Aatyk2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk2 is a member of the Aatyk subfamily of proteins, which are receptor kinases containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk2 is also called lemur tyrosine kinase 2 (Lmtk2) or brain-enriched kinase (Brek). It is expressed at high levels in early postnatal brain, and has been shown to play a role in nerve growth factor (NGF) signaling. Studies with knockout mice reveal that Aatyk2 is essential for late stage
Probab=100.00 E-value=2e-36 Score=293.90 Aligned_cols=245 Identities=20% Similarity=0.252 Sum_probs=180.3
Q ss_pred eeccCCceEEEEEEEcCC--CCEEEEEEeccc-----hhhHHHHHHHHHHcCCCCccccceeeeeccCCCceEEEEEeee
Q 011138 144 VVGTGSFGVVFQAKCLET--GDSVAIKKVLQD-----KRYKNRELQIMRLLNHPNVVSLKHCFFSTTEKDELYLNLVLEY 216 (492)
Q Consensus 144 ~lG~G~fg~Vy~~~~~~~--g~~vAiK~~~~~-----~~~~~~E~~il~~l~h~nIv~l~~~~~~~~~~~~~~~~lV~E~ 216 (492)
.||+|+||.||+|..... ...+++|.+... .....+|+.+++.++||||+++++++ .+....|+||||
T Consensus 2 ~lg~G~~g~v~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~e~~~~~~l~h~~iv~~~~~~-----~~~~~~~lv~e~ 76 (268)
T cd05086 2 EIGNGWFGKVLLSEIYTDTGVARVVVKELKANASSKEQNEFLQQGDPYRILQHPNILQCLGQC-----VEAIPYLLVFEY 76 (268)
T ss_pred cCCCCcCceEEEEEEEcCCCcceEEEEEecCCCChHHHHHHHHHHHHHhccCCcchhheEEEe-----cCCCccEEEEec
Confidence 599999999999975433 345667765432 23455788999999999999999988 344568999999
Q ss_pred chh-hHHHHhhhhhhcCCCcCHHHHHHHHHHHHHHHHHHHhhCCcccCCCCCCceEEcCCCCcEEEeeecCccccCCCC-
Q 011138 217 ISE-TVYRVSKHYTRMNQHVPILYVQLYTYQICRALNYLHHVVGVCHRDIKPQNLLVNPHTHQLKICDFGSAKMLVPGE- 294 (492)
Q Consensus 217 ~~~-~l~~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~yLH~~~givHrDlKp~NILl~~~~~~vkL~DFG~a~~~~~~~- 294 (492)
+.+ +|...+..........+...+..++.||+.||.|||+ ++|+||||||+|||++.++ .+||+|||++.......
T Consensus 77 ~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~i~~al~~lH~-~~i~H~dikp~nil~~~~~-~~~l~Dfg~~~~~~~~~~ 154 (268)
T cd05086 77 CELGDLKSYLSQEQWHRRNSQLLLLQRMACEIAAGVTHMHK-HNFLHSDLALRNCFLTSDL-TVKVGDYGIGPSRYKEDY 154 (268)
T ss_pred CCCCcHHHHHHhhhcccccccHHHHHHHHHHHHHHHHHHHH-CCeeccCCccceEEEcCCc-cEEecccccccccCcchh
Confidence 986 4544443322223456777788999999999999997 8999999999999999887 79999999986432211
Q ss_pred --CCccceeccCccCchhhcCC------CCCCcchhhHHHHHHHHHHHh-CCCCCCCCChHHHHHHHHHHhCCCCHHHHh
Q 011138 295 --PNISYICSRYYRAPELIFGA------TEYTTAIDMWSIGCVLAELLL-GQPLFPGESGVDQLVEIIKILGTPTREEIK 365 (492)
Q Consensus 295 --~~~~~~gt~~y~aPE~~~~~------~~~~~~~DvwSlGvil~ell~-G~~pf~~~~~~~~~~~i~~~~g~p~~~~~~ 365 (492)
......++..|+|||++... ..++.++|||||||++|||++ |..||...+..+.+..+.+....
T Consensus 155 ~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~~~DiwslG~~l~el~~~~~~p~~~~~~~~~~~~~~~~~~~------- 227 (268)
T cd05086 155 IETEDDKCVPLRWLAPELVGEFHGGLITAEQTKPSNVWALGVTLWELFENAAQPYSHLSDREVLNHVIKDQQV------- 227 (268)
T ss_pred hhcccCCcCcccccCchhcccccCccccCCCCCcchhHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHhhccc-------
Confidence 12245678899999987431 235789999999999999996 67899877766665554432100
Q ss_pred hcCCCCcccCCCcccCCCcccccCCCCChhHhhhhccccccCCCCcCCHHHhhC
Q 011138 366 CMNPNYTEFKFPQIKAHPWHKIFHKRMPPEALDLVSRLLQYSPSLRCTALEACA 419 (492)
Q Consensus 366 ~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~Li~~~L~~dP~~R~t~~e~l~ 419 (492)
.++ ...+...+++.+.+++..|| .||.+||++.++++
T Consensus 228 ---------~~~-------~~~~~~~~~~~~~~l~~~c~-~~P~~Rp~~~~i~~ 264 (268)
T cd05086 228 ---------KLF-------KPQLELPYSERWYEVLQFCW-LSPEKRATAEEVHR 264 (268)
T ss_pred ---------ccC-------CCccCCCCcHHHHHHHHHHh-hCcccCCCHHHHHH
Confidence 000 00111236788999999999 68999999999864
No 379
>cd05074 PTKc_Tyro3 Catalytic domain of the Protein Tyrosine Kinase, Tyro3. Protein Tyrosine Kinase (PTK) family; Tyro3; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyro3 (or Sky) is a member of the Axl subfamily, which is composed of receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Tyro3 is predominantly expressed in the central nervous system and the brain, and functions as a neurotrophic fac
Probab=100.00 E-value=1.1e-36 Score=296.15 Aligned_cols=250 Identities=21% Similarity=0.306 Sum_probs=188.2
Q ss_pred eeEeeeeccCCceEEEEEEEc---CCCCEEEEEEeccch------hhHHHHHHHHHHcCCCCccccceeeeeccCCCc-e
Q 011138 139 YMAERVVGTGSFGVVFQAKCL---ETGDSVAIKKVLQDK------RYKNRELQIMRLLNHPNVVSLKHCFFSTTEKDE-L 208 (492)
Q Consensus 139 y~~~~~lG~G~fg~Vy~~~~~---~~g~~vAiK~~~~~~------~~~~~E~~il~~l~h~nIv~l~~~~~~~~~~~~-~ 208 (492)
|.+.+.||+|+||.||+|.+. .+++.||||.+..+. ....+|+.+++.++||||+++++++......+. .
T Consensus 1 ~~~~~~ig~g~~g~v~~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~~~ 80 (273)
T cd05074 1 FTLGRMLGKGEFGSVREAQLKSEDGSFQKVAVKMLKADIFSSSDIEEFLREAACMKEFDHPNVIKLIGVSLRSRAKGRLP 80 (273)
T ss_pred CcchhcccCCCCCCEEeeEeeccCCCceEEEEEEeccccCChHHHHHHHHHHHHHhcCCCCCcceEEEEEccCCCCCccc
Confidence 567789999999999999864 457899999885432 234579999999999999999998755433222 2
Q ss_pred EEEEEeeechhhHH-HHhhhh--hhcCCCcCHHHHHHHHHHHHHHHHHHHhhCCcccCCCCCCceEEcCCCCcEEEeeec
Q 011138 209 YLNLVLEYISETVY-RVSKHY--TRMNQHVPILYVQLYTYQICRALNYLHHVVGVCHRDIKPQNLLVNPHTHQLKICDFG 285 (492)
Q Consensus 209 ~~~lV~E~~~~~l~-~~~~~~--~~~~~~~~~~~~~~i~~qi~~aL~yLH~~~givHrDlKp~NILl~~~~~~vkL~DFG 285 (492)
..++++||+.++.+ ..+... ......++...+..++.||+.||+|||+ +||+||||||+||+++.++ .+||+|||
T Consensus 81 ~~~~~~~~~~~~~l~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lH~-~~i~H~dikp~nili~~~~-~~kl~dfg 158 (273)
T cd05074 81 IPMVILPFMKHGDLHTFLLMSRIGEEPFTLPLQTLVRFMIDIASGMEYLSS-KNFIHRDLAARNCMLNENM-TVCVADFG 158 (273)
T ss_pred ceEEEEecCCCCcHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHHHHh-CCEeecccchhhEEEcCCC-CEEECccc
Confidence 34688999985433 332211 1112347888899999999999999997 9999999999999999877 79999999
Q ss_pred CccccCCCCC---CccceeccCccCchhhcCCCCCCcchhhHHHHHHHHHHHh-CCCCCCCCChHHHHHHHHHHhCCCCH
Q 011138 286 SAKMLVPGEP---NISYICSRYYRAPELIFGATEYTTAIDMWSIGCVLAELLL-GQPLFPGESGVDQLVEIIKILGTPTR 361 (492)
Q Consensus 286 ~a~~~~~~~~---~~~~~gt~~y~aPE~~~~~~~~~~~~DvwSlGvil~ell~-G~~pf~~~~~~~~~~~i~~~~g~p~~ 361 (492)
+++....... .....+++.|++||.+.+. .++.++|||||||++|+|++ |.+||.+.+..+....+...
T Consensus 159 ~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~-~~~~~sDi~slG~il~el~~~g~~p~~~~~~~~~~~~~~~~------ 231 (273)
T cd05074 159 LSKKIYSGDYYRQGCASKLPVKWLALESLADN-VYTTHSDVWAFGVTMWEIMTRGQTPYAGVENSEIYNYLIKG------ 231 (273)
T ss_pred ccccccCCcceecCCCccCchhhcCHhHHhcC-ccchhhhhHHHHHHHHHHhhCCCCCCCCCCHHHHHHHHHcC------
Confidence 9986533221 1223456789999998654 47899999999999999998 89999877654443333220
Q ss_pred HHHhhcCCCCcccCCCcccCCCcccccCCCCChhHhhhhccccccCCCCcCCHHHhhC
Q 011138 362 EEIKCMNPNYTEFKFPQIKAHPWHKIFHKRMPPEALDLVSRLLQYSPSLRCTALEACA 419 (492)
Q Consensus 362 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~Li~~~L~~dP~~R~t~~e~l~ 419 (492)
.... .....+..+.+++.+||..+|.+||++.+++.
T Consensus 232 ----------~~~~------------~~~~~~~~~~~l~~~~l~~~p~~Rps~~~~~~ 267 (273)
T cd05074 232 ----------NRLK------------QPPDCLEDVYELMCQCWSPEPKCRPSFQHLRD 267 (273)
T ss_pred ----------CcCC------------CCCCCCHHHHHHHHHHcCCChhhCcCHHHHHH
Confidence 0000 11246789999999999999999999999875
No 380
>cd05037 PTK_Jak_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinases, Janus kinases. Protein Tyrosine Kinase (PTK) family; Janus kinase (Jak) subfamily; pseudokinase domain (repeat1). The Jak subfamily is composed of Jak1, Jak2, Jak3, TYK2, and similar proteins. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal catalytic tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the ki
Probab=100.00 E-value=1.1e-36 Score=293.49 Aligned_cols=235 Identities=22% Similarity=0.246 Sum_probs=179.2
Q ss_pred eeeccCCceEEEEEEEcCCC----------CEEEEEEeccch---hhHHHHHHHHHHcCCCCccccceeeeeccCCCceE
Q 011138 143 RVVGTGSFGVVFQAKCLETG----------DSVAIKKVLQDK---RYKNRELQIMRLLNHPNVVSLKHCFFSTTEKDELY 209 (492)
Q Consensus 143 ~~lG~G~fg~Vy~~~~~~~g----------~~vAiK~~~~~~---~~~~~E~~il~~l~h~nIv~l~~~~~~~~~~~~~~ 209 (492)
+.||+|+||.||+|.+..++ ..+++|.+.... ..+.+|+.+++.++||||+++++++.. ..
T Consensus 1 ~~lg~G~~~~v~~~~~~~~~~~~~~~~~~~~~v~~k~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~------~~ 74 (259)
T cd05037 1 EHLGQGTFTNIYKGVLRVQSDLDIVGPGQEVSVVLKVLGSDHRDSLAFFETASLMSQLSHKHLVKLYGVCVR------DE 74 (259)
T ss_pred CcccccccceEEEEEEeccCCccccCCccceeeeeeccccchhhHHHHHHHHHHHHcCCCcchhheeeEEec------CC
Confidence 36899999999999998776 358888765433 345679999999999999999998744 23
Q ss_pred EEEEeeechhhHHHHhhhhhhcCCCcCHHHHHHHHHHHHHHHHHHHhhCCcccCCCCCCceEEcCCCC------cEEEee
Q 011138 210 LNLVLEYISETVYRVSKHYTRMNQHVPILYVQLYTYQICRALNYLHHVVGVCHRDIKPQNLLVNPHTH------QLKICD 283 (492)
Q Consensus 210 ~~lV~E~~~~~l~~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~yLH~~~givHrDlKp~NILl~~~~~------~vkL~D 283 (492)
.++||||+.++.+..... .....++...+..++.||+.||.|||+ +||+||||||+|||++.++. .+||+|
T Consensus 75 ~~lv~e~~~~~~L~~~l~--~~~~~~~~~~~~~~~~~i~~~l~~LH~-~~i~H~dlkp~Nill~~~~~~~~~~~~~kl~D 151 (259)
T cd05037 75 NIMVEEYVKFGPLDVFLH--REKNNVSLHWKLDVAKQLASALHYLED-KKLVHGNVCGKNILVARYGLNEGYVPFIKLSD 151 (259)
T ss_pred cEEEEEcCCCCcHHHHHH--hhccCCCHHHHHHHHHHHHHHHHHHhh-CCeecccCccceEEEecCccccCCceeEEeCC
Confidence 679999999765443222 112368888999999999999999997 99999999999999986652 499999
Q ss_pred ecCccccCCCCCCccceeccCccCchhhcCC-CCCCcchhhHHHHHHHHHHHh-CCCCCCCCChHHHHHHHHHHhCCCCH
Q 011138 284 FGSAKMLVPGEPNISYICSRYYRAPELIFGA-TEYTTAIDMWSIGCVLAELLL-GQPLFPGESGVDQLVEIIKILGTPTR 361 (492)
Q Consensus 284 FG~a~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~~~DvwSlGvil~ell~-G~~pf~~~~~~~~~~~i~~~~g~p~~ 361 (492)
||++..... .....++..|+|||++.+. ..++.++|||||||++|+|++ |..||...+..+.......
T Consensus 152 fg~a~~~~~---~~~~~~~~~y~aPE~~~~~~~~~~~~~Di~slG~~~~~l~~~~~~p~~~~~~~~~~~~~~~------- 221 (259)
T cd05037 152 PGIPITVLS---REERVERIPWIAPECIRNGQASLTIAADKWSFGTTLLEICSNGEEPLSTLSSSEKERFYQD------- 221 (259)
T ss_pred CCccccccc---ccccccCCCccChhhhcCCCCCcchhhHHHHHHHHHHHHHhCCCCCcccCCchhHHHHHhc-------
Confidence 999986533 2234567789999998665 358999999999999999999 5888866543222111100
Q ss_pred HHHhhcCCCCcccCCCcccCCCcccccCCCCChhHhhhhccccccCCCCcCCHHHhhC
Q 011138 362 EEIKCMNPNYTEFKFPQIKAHPWHKIFHKRMPPEALDLVSRLLQYSPSLRCTALEACA 419 (492)
Q Consensus 362 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~Li~~~L~~dP~~R~t~~e~l~ 419 (492)
....+ .....++.+||.+||..||.+|||+.++++
T Consensus 222 -----------~~~~~------------~~~~~~~~~li~~~l~~~p~~Rpt~~~il~ 256 (259)
T cd05037 222 -----------QHRLP------------MPDCAELANLINQCWTYDPTKRPSFRAILR 256 (259)
T ss_pred -----------CCCCC------------CCCchHHHHHHHHHhccChhhCCCHHHHHH
Confidence 00000 112378899999999999999999999975
No 381
>PLN03224 probable serine/threonine protein kinase; Provisional
Probab=100.00 E-value=6.6e-36 Score=310.02 Aligned_cols=274 Identities=21% Similarity=0.281 Sum_probs=182.5
Q ss_pred ccccceeEeeeeccCCceEEEEEEEc----------------CCCCEEEEEEeccchh------------------hHHH
Q 011138 134 KQTISYMAERVVGTGSFGVVFQAKCL----------------ETGDSVAIKKVLQDKR------------------YKNR 179 (492)
Q Consensus 134 ~~~~~y~~~~~lG~G~fg~Vy~~~~~----------------~~g~~vAiK~~~~~~~------------------~~~~ 179 (492)
....+|.+.++||+|+||+||+|.+. ..++.||||++..+.. ....
T Consensus 142 ~~~d~F~i~~~LG~GgFG~VYkG~~~~~~~~~v~~~~~~~~~~~~r~VAVK~l~~~~~~~~~~fl~e~~~~~~~~e~~~v 221 (507)
T PLN03224 142 WSSDDFQLRDKLGGGNFGITFEGLRLQADDQGVTQRSKLTAEQKKRRVVLKRVNMDRQGVRQDFLKTGTLAKGSAETGMV 221 (507)
T ss_pred ccccCceEeeEeecCCCeEEEEEEecccccchhhhhccccccccCceEEEEEecccchhhHHHHHhhhhhhhcccchhHH
Confidence 34568999999999999999999752 2456799998854321 1123
Q ss_pred HHHHHHHcCCCCc-----cccceeeeeccC---CCceEEEEEeeechhh-HHHHhhhhh--------------------h
Q 011138 180 ELQIMRLLNHPNV-----VSLKHCFFSTTE---KDELYLNLVLEYISET-VYRVSKHYT--------------------R 230 (492)
Q Consensus 180 E~~il~~l~h~nI-----v~l~~~~~~~~~---~~~~~~~lV~E~~~~~-l~~~~~~~~--------------------~ 230 (492)
|+.++.+++|.++ ++++++|..... ......+|||||++++ |.+.+.... .
T Consensus 222 E~~~l~~l~~~~l~~~~~~~~lg~~~~~~~~g~~~~~~~~LV~Ey~~~gsL~~~L~~~~~~~~~~L~e~l~~g~~l~~~~ 301 (507)
T PLN03224 222 EAYMCAKIKRNPIAAASCAEYLGYFTSNTADGAFTKGSQWLVWKFESDATLGDALDGKLGPFPGCLEEFMMAGKKIPDNM 301 (507)
T ss_pred HHHHHHHhhcccchhhhhhhhhhhcccccccccccCCceEEEEEcCCCCcHHHHHhhccCCCcchHHHHHhcCCchhhhc
Confidence 6677777776654 667776643221 1223478999999864 333332100 0
Q ss_pred cCCCcCHHHHHHHHHHHHHHHHHHHhhCCcccCCCCCCceEEcCCCCcEEEeeecCccccCCCCCCcc--ceeccCccCc
Q 011138 231 MNQHVPILYVQLYTYQICRALNYLHHVVGVCHRDIKPQNLLVNPHTHQLKICDFGSAKMLVPGEPNIS--YICSRYYRAP 308 (492)
Q Consensus 231 ~~~~~~~~~~~~i~~qi~~aL~yLH~~~givHrDlKp~NILl~~~~~~vkL~DFG~a~~~~~~~~~~~--~~gt~~y~aP 308 (492)
....+++..++.++.||+.+|.|||+ ++|+||||||+|||++.++ .+||+|||++.....+..... ..+|+.|+||
T Consensus 302 ~~~~~~~~~~~~i~~ql~~aL~~lH~-~~ivHrDLKp~NILl~~~~-~~kL~DFGla~~~~~~~~~~~~~g~~tp~Y~aP 379 (507)
T PLN03224 302 PQDKRDINVIKGVMRQVLTGLRKLHR-IGIVHRDIKPENLLVTVDG-QVKIIDFGAAVDMCTGINFNPLYGMLDPRYSPP 379 (507)
T ss_pred ccccCCHHHHHHHHHHHHHHHHHHHH-CCeecCCCchHhEEECCCC-cEEEEeCcCccccccCCccCccccCCCcceeCh
Confidence 11234567788999999999999997 8999999999999999887 799999999976543332222 2348899999
Q ss_pred hhhcCCCC-------------------C--CcchhhHHHHHHHHHHHhCCC-CCCCCChHHHHHHHHHHhCCCCHHHHhh
Q 011138 309 ELIFGATE-------------------Y--TTAIDMWSIGCVLAELLLGQP-LFPGESGVDQLVEIIKILGTPTREEIKC 366 (492)
Q Consensus 309 E~~~~~~~-------------------~--~~~~DvwSlGvil~ell~G~~-pf~~~~~~~~~~~i~~~~g~p~~~~~~~ 366 (492)
|++..... | ....||||+||++|+|++|.. ||.+....... .+...... ..|..
T Consensus 380 E~l~~~~~~~~~~~~~~~~~l~~~~~~yg~~~~~DvwSlGvil~em~~~~l~p~~~~~~f~~~---~~~~~~~~-~~~r~ 455 (507)
T PLN03224 380 EELVMPQSCPRAPAPAMAALLSPFAWLYGRPDLFDSYTAGVLLMQMCVPELRPVANIRLFNTE---LRQYDNDL-NRWRM 455 (507)
T ss_pred hhhcCCCCCCccchhhhhhhhhhhHHhcCCCCccchhhHHHHHHHHHhCCCCCccchhhhhhH---HhhccchH-HHHHh
Confidence 99853211 1 124799999999999999875 77543211111 00000000 00100
Q ss_pred cCCCCcccCCCcccCCCcccccCCCCChhHhhhhccccccCC---CCcCCHHHhhCCCCCCC
Q 011138 367 MNPNYTEFKFPQIKAHPWHKIFHKRMPPEALDLVSRLLQYSP---SLRCTALEACAHPFFDD 425 (492)
Q Consensus 367 ~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~Li~~~L~~dP---~~R~t~~e~l~Hp~f~~ 425 (492)
... ..+.|+ ....++++++||+.+||..+| .+|+|+.|+|+||||..
T Consensus 456 ~~~--~~~~~~----------~~d~~s~~~~dLi~~LL~~~~~~~~~RlSa~eaL~Hp~f~~ 505 (507)
T PLN03224 456 YKG--QKYDFS----------LLDRNKEAGWDLACKLITKRDQANRGRLSVGQALSHRFFLP 505 (507)
T ss_pred hcc--cCCCcc----------cccccChHHHHHHHHHhccCCCCcccCCCHHHHhCCCCcCC
Confidence 000 011111 224578999999999999876 68999999999999964
No 382
>KOG1095 consensus Protein tyrosine kinase [Signal transduction mechanisms]
Probab=100.00 E-value=1.2e-36 Score=327.40 Aligned_cols=246 Identities=21% Similarity=0.350 Sum_probs=196.2
Q ss_pred ceeEeeeeccCCceEEEEEEEcCCCC-----EEEEEEeccc-----hhhHHHHHHHHHHcCCCCccccceeeeeccCCCc
Q 011138 138 SYMAERVVGTGSFGVVFQAKCLETGD-----SVAIKKVLQD-----KRYKNRELQIMRLLNHPNVVSLKHCFFSTTEKDE 207 (492)
Q Consensus 138 ~y~~~~~lG~G~fg~Vy~~~~~~~g~-----~vAiK~~~~~-----~~~~~~E~~il~~l~h~nIv~l~~~~~~~~~~~~ 207 (492)
.-.+.+.||+|.||.||.|....... .||||.+.+. ...+.+|..+|+.++|||||+++++++...
T Consensus 693 ~v~l~~~lG~G~FG~VY~g~~~~~~~~~~~~~vaiK~l~~~~~~~~~~~Fl~Ea~~m~~f~HpNiv~liGv~l~~~---- 768 (1025)
T KOG1095|consen 693 NVTLLRVLGKGAFGEVYEGTYSDVPGSVSPIQVAVKSLKRLSSEQEVSDFLKEALLMSKFDHPNIVSLIGVCLDSG---- 768 (1025)
T ss_pred heEeeeeeccccccceEEEEEecCCCCccceEEEEEeccccCCHHHHHHHHHHHHHHhcCCCcceeeEEEeecCCC----
Confidence 46778899999999999998754332 3999988654 334558999999999999999999997633
Q ss_pred eEEEEEeeechh-hHHHHhhhhhh---cCCCcCHHHHHHHHHHHHHHHHHHHhhCCcccCCCCCCceEEcCCCCcEEEee
Q 011138 208 LYLNLVLEYISE-TVYRVSKHYTR---MNQHVPILYVQLYTYQICRALNYLHHVVGVCHRDIKPQNLLVNPHTHQLKICD 283 (492)
Q Consensus 208 ~~~~lV~E~~~~-~l~~~~~~~~~---~~~~~~~~~~~~i~~qi~~aL~yLH~~~givHrDlKp~NILl~~~~~~vkL~D 283 (492)
-.+|++|||.| +|+.+++..+. ....+.......++.||++|++||++ +++|||||...|+||+... .|||+|
T Consensus 769 -~~~i~leyM~gGDL~sflr~~r~~~~~~~~L~~~dLl~~a~dvA~G~~YLe~-~~fvHRDLAaRNCLL~~~r-~VKIaD 845 (1025)
T KOG1095|consen 769 -PPLILLEYMEGGDLLSFLRESRPAPFQPSNLSMRDLLAFALDVAKGMNYLES-KHFVHRDLAARNCLLDERR-VVKIAD 845 (1025)
T ss_pred -CcEEEehhcccCcHHHHHHhcccccCCCCCCCHHHHHHHHHHHhhhhHHHHh-CCCcCcchhhhheeecccC-cEEEcc
Confidence 36799999985 55555544211 14567888899999999999999997 9999999999999999887 899999
Q ss_pred ecCccccCCCCCCc-c--ceeccCccCchhhcCCCCCCcchhhHHHHHHHHHHHh-CCCCCCCCChHHHHHHHHHHhCCC
Q 011138 284 FGSAKMLVPGEPNI-S--YICSRYYRAPELIFGATEYTTAIDMWSIGCVLAELLL-GQPLFPGESGVDQLVEIIKILGTP 359 (492)
Q Consensus 284 FG~a~~~~~~~~~~-~--~~gt~~y~aPE~~~~~~~~~~~~DvwSlGvil~ell~-G~~pf~~~~~~~~~~~i~~~~g~p 359 (492)
||+|+.+...+... . ..-...|||||.+.. ..++.++|||||||+|||+++ |..||.+.++.+.+......-
T Consensus 846 FGlArDiy~~~yyr~~~~a~lPvkWm~PEsl~d-~iFtskSDvWsFGVllWEifslG~~PY~~~~n~~v~~~~~~gg--- 921 (1025)
T KOG1095|consen 846 FGLARDIYDKDYYRKHGEAMLPVKWMPPESLKD-GIFTSKSDVWSFGVLLWEIFSLGATPYPSRSNFEVLLDVLEGG--- 921 (1025)
T ss_pred cchhHhhhhchheeccCccccceecCCHHHHhh-cccccccchhhhHHHHHHHHhCCCCCCCCcchHHHHHHHHhCC---
Confidence 99999553332211 1 122457999999975 459999999999999999997 999999999887776554421
Q ss_pred CHHHHhhcCCCCcccCCCcccCCCcccccCCCCChhHhhhhccccccCCCCcCCHHHhhC
Q 011138 360 TREEIKCMNPNYTEFKFPQIKAHPWHKIFHKRMPPEALDLVSRLLQYSPSLRCTALEACA 419 (492)
Q Consensus 360 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~Li~~~L~~dP~~R~t~~e~l~ 419 (492)
.++ .+..+++.+.+++..||+.+|++||+...|++
T Consensus 922 ---------------RL~----------~P~~CP~~ly~lM~~CW~~~pe~RP~F~~i~~ 956 (1025)
T KOG1095|consen 922 ---------------RLD----------PPSYCPEKLYQLMLQCWKHDPEDRPSFRTIVE 956 (1025)
T ss_pred ---------------ccC----------CCCCCChHHHHHHHHHccCChhhCccHHHHHh
Confidence 111 12468899999999999999999999999987
No 383
>cd05038 PTKc_Jak_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinases, Janus kinases. Protein Tyrosine Kinase (PTK) family; Janus kinase (Jak) subfamily; catalytic (c) domain (repeat 2). The Jak subfamily is composed of Jak1, Jak2, Jak3, TYK2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase catalytic domain. Most Jaks are expressed in a wide variety of tissues, except for Jak3, which is expressed only in hematopoietic cells. Jaks are crucial for cytokine receptor signaling. They are activated by aut
Probab=100.00 E-value=8.4e-36 Score=291.23 Aligned_cols=259 Identities=25% Similarity=0.363 Sum_probs=187.5
Q ss_pred ceeEeeeeccCCceEEEEEEEc----CCCCEEEEEEeccch-----hhHHHHHHHHHHcCCCCccccceeeeeccCCCce
Q 011138 138 SYMAERVVGTGSFGVVFQAKCL----ETGDSVAIKKVLQDK-----RYKNRELQIMRLLNHPNVVSLKHCFFSTTEKDEL 208 (492)
Q Consensus 138 ~y~~~~~lG~G~fg~Vy~~~~~----~~g~~vAiK~~~~~~-----~~~~~E~~il~~l~h~nIv~l~~~~~~~~~~~~~ 208 (492)
.|.+.+.||+|+||.||+|... .++..||||.+.... ....+|+.+++.+.|+||+++++++.. .+..
T Consensus 5 ~~~~~~~ig~g~~~~v~~~~~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~ei~~l~~l~~~~i~~~~~~~~~---~~~~ 81 (284)
T cd05038 5 HLKFIKQLGEGHFGKVELCRYDPLGDNTGEQVAVKSLNHSGEEQHRSDFEREIEILRTLDHENIVKYKGVCEK---PGGR 81 (284)
T ss_pred hchhheeeccCCCeeEEEeeecCCCCCCceEEEEEEeccccchHHHHHHHHHHHHHHhCCCCChheEEeeeec---CCCC
Confidence 4778899999999999999864 358899999886443 345689999999999999999987733 2244
Q ss_pred EEEEEeeechh-hHHHHhhhhhhcCCCcCHHHHHHHHHHHHHHHHHHHhhCCcccCCCCCCceEEcCCCCcEEEeeecCc
Q 011138 209 YLNLVLEYISE-TVYRVSKHYTRMNQHVPILYVQLYTYQICRALNYLHHVVGVCHRDIKPQNLLVNPHTHQLKICDFGSA 287 (492)
Q Consensus 209 ~~~lV~E~~~~-~l~~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~yLH~~~givHrDlKp~NILl~~~~~~vkL~DFG~a 287 (492)
+.++||||+++ .+...+.. ....+++..+..++.||+.||+|||+ +||+||||||+||+++.++ .++|+|||++
T Consensus 82 ~~~lv~e~~~~~~l~~~l~~---~~~~~~~~~~~~~~~~l~~aL~~lH~-~~i~H~dl~p~nil~~~~~-~~~l~dfg~~ 156 (284)
T cd05038 82 SLRLIMEYLPSGSLRDYLQR---HRDQINLKRLLLFSSQICKGMDYLGS-QRYIHRDLAARNILVESED-LVKISDFGLA 156 (284)
T ss_pred ceEEEEecCCCCCHHHHHHh---CccccCHHHHHHHHHHHHHHHHHHHh-CCeecCCCCHHhEEEcCCC-CEEEcccccc
Confidence 68899999976 44443322 22358889999999999999999997 9999999999999999887 7999999999
Q ss_pred cccCCCCCC----ccceeccCccCchhhcCCCCCCcchhhHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHH-hCCCCHH
Q 011138 288 KMLVPGEPN----ISYICSRYYRAPELIFGATEYTTAIDMWSIGCVLAELLLGQPLFPGESGVDQLVEIIKI-LGTPTRE 362 (492)
Q Consensus 288 ~~~~~~~~~----~~~~gt~~y~aPE~~~~~~~~~~~~DvwSlGvil~ell~G~~pf~~~~~~~~~~~i~~~-~g~p~~~ 362 (492)
......... ....++..|+|||.+.+. .++.++|||||||++|+|++|..||........ .+... .+.....
T Consensus 157 ~~~~~~~~~~~~~~~~~~~~~~~~Pe~~~~~-~~~~~~Di~slG~~l~el~tg~~p~~~~~~~~~--~~~~~~~~~~~~~ 233 (284)
T cd05038 157 KVLPEDKDYYYVKEPGESPIFWYAPECLRTS-KFSSASDVWSFGVTLYELFTYGDPSQSPPAEFL--RMIGIAQGQMIVT 233 (284)
T ss_pred cccccCCcceeccCCCCCcccccCcHHHccC-CCCcccchHHHhhhhheeeccCCCcccccchhc--cccccccccccHH
Confidence 876432211 122345679999998654 588999999999999999999999865432110 00000 0000000
Q ss_pred HHhhcCCCCcccCCCcccCCCcccccCCCCChhHhhhhccccccCCCCcCCHHHhhC
Q 011138 363 EIKCMNPNYTEFKFPQIKAHPWHKIFHKRMPPEALDLVSRLLQYSPSLRCTALEACA 419 (492)
Q Consensus 363 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~Li~~~L~~dP~~R~t~~e~l~ 419 (492)
.+..... ....++ .+...+.++.+|+.+||..||.+|||+.++++
T Consensus 234 ~~~~~~~--~~~~~~----------~~~~~~~~~~~li~~cl~~~p~~Rpt~~ei~~ 278 (284)
T cd05038 234 RLLELLK--EGERLP----------RPPSCPDEVYDLMKLCWEAEPQDRPSFADLIL 278 (284)
T ss_pred HHHHHHH--cCCcCC----------CCccCCHHHHHHHHHHhccChhhCCCHHHHHH
Confidence 0000000 000011 11245788999999999999999999999975
No 384
>KOG1167 consensus Serine/threonine protein kinase of the CDC7 subfamily involved in DNA synthesis, repair and recombination [Replication, recombination and repair]
Probab=100.00 E-value=9.2e-37 Score=294.49 Aligned_cols=281 Identities=30% Similarity=0.501 Sum_probs=214.6
Q ss_pred cccceeEeeeeccCCceEEEEEEEcC---CCCEEEEEEecc--chhhHHHHHHHHHHcC-CCCccccceeeeeccCCCce
Q 011138 135 QTISYMAERVVGTGSFGVVFQAKCLE---TGDSVAIKKVLQ--DKRYKNRELQIMRLLN-HPNVVSLKHCFFSTTEKDEL 208 (492)
Q Consensus 135 ~~~~y~~~~~lG~G~fg~Vy~~~~~~---~g~~vAiK~~~~--~~~~~~~E~~il~~l~-h~nIv~l~~~~~~~~~~~~~ 208 (492)
....|..+++||.|.|++||++.+.. ..+.||+|.+.. ......+|+++|..+. +.||+++.+++ ....
T Consensus 34 ~~~~~~~v~kigeGsFssv~~a~~~~~~~~~~~valk~i~~ts~p~ri~~El~~L~~~gG~~ni~~~~~~~-----rnnd 108 (418)
T KOG1167|consen 34 ISNAYKVVNKIGEGSFSSVYKATDIEQDTKRRYVALKAIYRTSSPSRILNELEMLYRLGGSDNIIKLNGCF-----RNND 108 (418)
T ss_pred hhhhhhhhccccccchhhhhhhhHhhhccccceEeeeecccccCchHHHHHHHHHHHhccchhhhcchhhh-----ccCC
Confidence 34569999999999999999999877 788999998843 3445678999999885 89999999998 5556
Q ss_pred EEEEEeeechhhHHHHhhhhhhcCCCcCHHHHHHHHHHHHHHHHHHHhhCCcccCCCCCCceEEcCCCCcEEEeeecCcc
Q 011138 209 YLNLVLEYISETVYRVSKHYTRMNQHVPILYVQLYTYQICRALNYLHHVVGVCHRDIKPQNLLVNPHTHQLKICDFGSAK 288 (492)
Q Consensus 209 ~~~lV~E~~~~~l~~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~yLH~~~givHrDlKp~NILl~~~~~~vkL~DFG~a~ 288 (492)
.+++||||++..-...+ ...++...++.|++.++.||.++|. +|||||||||.|+|.+.....-.|+|||+|.
T Consensus 109 ~v~ivlp~~~H~~f~~l------~~~l~~~~i~~Yl~~ll~Al~~~h~-~GIvHRDiKpsNFL~n~~t~rg~LvDFgLA~ 181 (418)
T KOG1167|consen 109 QVAIVLPYFEHDRFRDL------YRSLSLAEIRWYLRNLLKALAHLHK-NGIVHRDIKPSNFLYNRRTQRGVLVDFGLAQ 181 (418)
T ss_pred eeEEEecccCccCHHHH------HhcCCHHHHHHHHHHHHHHhhhhhc-cCccccCCCccccccccccCCceEEechhHH
Confidence 68999999996533222 2346688899999999999999997 9999999999999999888788999999985
Q ss_pred cc-----------------CC--CC--------------------------CCccceeccCccCchhhcCCCCCCcchhh
Q 011138 289 ML-----------------VP--GE--------------------------PNISYICSRYYRAPELIFGATEYTTAIDM 323 (492)
Q Consensus 289 ~~-----------------~~--~~--------------------------~~~~~~gt~~y~aPE~~~~~~~~~~~~Dv 323 (492)
.. .+ +. ......||+.|+|||++.....-+.++||
T Consensus 182 ~~d~~~~~~~s~~~~~~~~~~~~g~~~~~~~~~~~~~p~g~~~~~~~~r~~~~anrAGT~GfRaPEvL~k~~~QttaiDi 261 (418)
T KOG1167|consen 182 RYDGYQQTEHSRSYSGRHATPAMGKDVHCQSVATASKPAGYYRRCNDGRPSERANRAGTPGFRAPEVLFRCPRQTTAIDI 261 (418)
T ss_pred HHHhhhhhhhhhhhhcccCCccccCcccccccccccCCCCceeccCCCccceecccCCCCCCCchHHHhhccCcCCccce
Confidence 11 00 00 00134689999999999988888999999
Q ss_pred HHHHHHHHHHHhCCCCCC-CCChHHHHHHHHHHhCCCCHHHHhhcCCC------------------CcccCCCcccC---
Q 011138 324 WSIGCVLAELLLGQPLFP-GESGVDQLVEIIKILGTPTREEIKCMNPN------------------YTEFKFPQIKA--- 381 (492)
Q Consensus 324 wSlGvil~ell~G~~pf~-~~~~~~~~~~i~~~~g~p~~~~~~~~~~~------------------~~~~~~~~~~~--- 381 (492)
||.|||+.-+++++.||- ..++.+.+.+|+..+|.-........... |.......+..
T Consensus 262 ws~GVI~Lslls~~~PFf~a~dd~~al~ei~tifG~~~mrk~A~l~g~~~l~~ksn~~~~~e~~~~f~s~~~~~~~~~~q 341 (418)
T KOG1167|consen 262 WSAGVILLSLLSRRYPFFKAKDDADALAEIATIFGSAEMRKCAALPGRILLWQKSNIPTIPELRVNFETLHIESIYKSRQ 341 (418)
T ss_pred eeccceeehhhccccccccCccccchHHHHHHHhChHHHHHHhhcCCceeeeccccccccHHHHhchhccChhhcccccc
Confidence 999999999999999975 45667778888877776444332211111 11110000000
Q ss_pred -CCcccccCCCCChhHhhhhccccccCCCCcCCHHHhhCCCCCCCCC
Q 011138 382 -HPWHKIFHKRMPPEALDLVSRLLQYSPSLRCTALEACAHPFFDDLR 427 (492)
Q Consensus 382 -~~~~~~~~~~~s~~~~~Li~~~L~~dP~~R~t~~e~l~Hp~f~~~~ 427 (492)
..+........+..+.||+.+||+.||.+|+|++++|.||||.+..
T Consensus 342 ~n~~~~~~~d~~~~~~~dlLdk~le~np~kRitAEeALkHpFF~~~~ 388 (418)
T KOG1167|consen 342 PNTEREIGSDVFPALLLDLLDKCLELNPQKRITAEDALKHPFFDEAD 388 (418)
T ss_pred cceeeccccccccHHHHHHHHHHccCChhhcccHHHHhcCcCCcchh
Confidence 0122223344566899999999999999999999999999999654
No 385
>KOG1027 consensus Serine/threonine protein kinase and endoribonuclease ERN1/IRE1, sensor of the unfolded protein response pathway [Signal transduction mechanisms]
Probab=100.00 E-value=1.9e-36 Score=312.63 Aligned_cols=252 Identities=29% Similarity=0.444 Sum_probs=193.0
Q ss_pred ceeEeeeeccCCceE-EEEEEEcCCCCEEEEEEeccchh-hHHHHHHHHHHcC-CCCccccceeeeeccCCCceEEEEEe
Q 011138 138 SYMAERVVGTGSFGV-VFQAKCLETGDSVAIKKVLQDKR-YKNRELQIMRLLN-HPNVVSLKHCFFSTTEKDELYLNLVL 214 (492)
Q Consensus 138 ~y~~~~~lG~G~fg~-Vy~~~~~~~g~~vAiK~~~~~~~-~~~~E~~il~~l~-h~nIv~l~~~~~~~~~~~~~~~~lV~ 214 (492)
-|.-.+++|.|+-|+ ||+|.. .|+.||||.+..... ..+||+..|+.-+ |||||++|+. +.+..++||..
T Consensus 510 ~~~~~eilG~Gs~Gt~Vf~G~y--e~R~VAVKrll~e~~~~A~rEi~lL~eSD~H~NviRyyc~-----E~d~qF~YIal 582 (903)
T KOG1027|consen 510 FFSPKEILGYGSNGTVVFRGVY--EGREVAVKRLLEEFFDFAQREIQLLQESDEHPNVIRYYCS-----EQDRQFLYIAL 582 (903)
T ss_pred eeccHHHcccCCCCcEEEEEee--CCceehHHHHhhHhHHHHHHHHHHHHhccCCCceEEEEee-----ccCCceEEEEe
Confidence 355667899998875 699987 789999998866544 6789999999885 9999997654 37788999999
Q ss_pred eechhhHHHHhhhhhhcCCCcCHHHHHHHHHHHHHHHHHHHhhCCcccCCCCCCceEEcC---CC-CcEEEeeecCcccc
Q 011138 215 EYISETVYRVSKHYTRMNQHVPILYVQLYTYQICRALNYLHHVVGVCHRDIKPQNLLVNP---HT-HQLKICDFGSAKML 290 (492)
Q Consensus 215 E~~~~~l~~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~yLH~~~givHrDlKp~NILl~~---~~-~~vkL~DFG~a~~~ 290 (492)
|.|..+|.+++...............+.++.|++.||++||+ .+||||||||+||||+. ++ ..++|+|||+++.+
T Consensus 583 ELC~~sL~dlie~~~~d~~~~~~i~~~~~l~q~~~GlaHLHs-l~iVHRDLkPQNILI~~~~~~~~~ra~iSDfglsKkl 661 (903)
T KOG1027|consen 583 ELCACSLQDLIESSGLDVEMQSDIDPISVLSQIASGLAHLHS-LKIVHRDLKPQNILISVPSADGTLRAKISDFGLSKKL 661 (903)
T ss_pred hHhhhhHHHHHhccccchhhcccccHHHHHHHHHHHHHHHHh-cccccccCCCceEEEEccCCCcceeEEeccccccccc
Confidence 999999888776521111111114456788999999999997 89999999999999976 23 37999999999988
Q ss_pred CCCCC----CccceeccCccCchhhcCCCCCCcchhhHHHHHHHHHHHhC-CCCCCCCChHHHHHHHHHHhCCCCHHHHh
Q 011138 291 VPGEP----NISYICSRYYRAPELIFGATEYTTAIDMWSIGCVLAELLLG-QPLFPGESGVDQLVEIIKILGTPTREEIK 365 (492)
Q Consensus 291 ~~~~~----~~~~~gt~~y~aPE~~~~~~~~~~~~DvwSlGvil~ell~G-~~pf~~~~~~~~~~~i~~~~g~p~~~~~~ 365 (492)
..+.. ..+..||-.|+|||++.+.. -+.++||+||||++|+.++| ..||...- +.-.+|+.
T Consensus 662 ~~~~sS~~r~s~~sGt~GW~APE~L~~~~-~~~avDiFslGCvfyYvltgG~HpFGd~~--~R~~NIl~----------- 727 (903)
T KOG1027|consen 662 AGGKSSFSRLSGGSGTSGWQAPEQLREDR-KTQAVDIFSLGCVFYYVLTGGSHPFGDSL--ERQANILT----------- 727 (903)
T ss_pred CCCcchhhcccCCCCcccccCHHHHhccc-cCcccchhhcCceEEEEecCCccCCCchH--Hhhhhhhc-----------
Confidence 66543 33567899999999997654 57799999999999999985 99996543 33344433
Q ss_pred hcCCCCcccCCCcccCCCcccccCCCCChhHhhhhccccccCCCCcCCHHHhhCCCCCCCC
Q 011138 366 CMNPNYTEFKFPQIKAHPWHKIFHKRMPPEALDLVSRLLQYSPSLRCTALEACAHPFFDDL 426 (492)
Q Consensus 366 ~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~Li~~~L~~dP~~R~t~~e~l~Hp~f~~~ 426 (492)
..+..-.+ .+....+++|||.+||.+||..||+|.++|+||||-+.
T Consensus 728 ------~~~~L~~L---------~~~~d~eA~dLI~~ml~~dP~~RPsa~~VL~HPlFW~~ 773 (903)
T KOG1027|consen 728 ------GNYTLVHL---------EPLPDCEAKDLISRMLNPDPQLRPSATDVLNHPLFWDS 773 (903)
T ss_pred ------Cccceeee---------ccCchHHHHHHHHHhcCCCcccCCCHHHHhCCCccCCh
Confidence 11111111 11112289999999999999999999999999999753
No 386
>KOG4257 consensus Focal adhesion tyrosine kinase FAK, contains FERM domain [Signal transduction mechanisms]
Probab=100.00 E-value=3.5e-36 Score=300.69 Aligned_cols=240 Identities=29% Similarity=0.441 Sum_probs=189.6
Q ss_pred eeEeeeeccCCceEEEEEEEcC--CC--CEEEEEEeccc-----hhhHHHHHHHHHHcCCCCccccceeeeeccCCCceE
Q 011138 139 YMAERVVGTGSFGVVFQAKCLE--TG--DSVAIKKVLQD-----KRYKNRELQIMRLLNHPNVVSLKHCFFSTTEKDELY 209 (492)
Q Consensus 139 y~~~~~lG~G~fg~Vy~~~~~~--~g--~~vAiK~~~~~-----~~~~~~E~~il~~l~h~nIv~l~~~~~~~~~~~~~~ 209 (492)
..+.++||.|.||.||.|.... .| -.||||.-+.+ .+.+..|..+|+.++|||||+|++++....
T Consensus 391 Itl~r~iG~GqFGdVy~gvYt~~~kge~iaVAvKtCK~d~t~d~tekflqEa~iMrnfdHphIikLIGv~~e~P------ 464 (974)
T KOG4257|consen 391 ITLKRLIGEGQFGDVYKGVYTDPEKGERIAVAVKTCKTDCTPDDTEKFLQEASIMRNFDHPHIIKLIGVCVEQP------ 464 (974)
T ss_pred ccHHHhhcCCcccceeeeEecccccCcceeeeeehhccCCChhhHHHHHHHHHHHHhCCCcchhheeeeeeccc------
Confidence 4456789999999999997643 23 34888977553 344557999999999999999999984322
Q ss_pred EEEEeeechhh-HHHHhhhhhhcCCCcCHHHHHHHHHHHHHHHHHHHhhCCcccCCCCCCceEEcCCCCcEEEeeecCcc
Q 011138 210 LNLVLEYISET-VYRVSKHYTRMNQHVPILYVQLYTYQICRALNYLHHVVGVCHRDIKPQNLLVNPHTHQLKICDFGSAK 288 (492)
Q Consensus 210 ~~lV~E~~~~~-l~~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~yLH~~~givHrDlKp~NILl~~~~~~vkL~DFG~a~ 288 (492)
.+||||+++-| |...+ ......++......|++||+.||.|||+ +.+|||||...|||+.+.. .|||+|||+++
T Consensus 465 ~WivmEL~~~GELr~yL---q~nk~sL~l~tL~ly~~Qi~talaYLeS-krfVHRDIAaRNiLVsSp~-CVKLaDFGLSR 539 (974)
T KOG4257|consen 465 MWIVMELAPLGELREYL---QQNKDSLPLRTLTLYCYQICTALAYLES-KRFVHRDIAARNILVSSPQ-CVKLADFGLSR 539 (974)
T ss_pred eeEEEecccchhHHHHH---HhccccchHHHHHHHHHHHHHHHHHHHh-hchhhhhhhhhheeecCcc-eeeecccchhh
Confidence 78999999844 44333 3345668888899999999999999997 9999999999999999887 89999999999
Q ss_pred ccCCCCCCcccee--ccCccCchhhcCCCCCCcchhhHHHHHHHHHHH-hCCCCCCCCChHHHHHHHHHHhCCCCHHHHh
Q 011138 289 MLVPGEPNISYIC--SRYYRAPELIFGATEYTTAIDMWSIGCVLAELL-LGQPLFPGESGVDQLVEIIKILGTPTREEIK 365 (492)
Q Consensus 289 ~~~~~~~~~~~~g--t~~y~aPE~~~~~~~~~~~~DvwSlGvil~ell-~G~~pf~~~~~~~~~~~i~~~~g~p~~~~~~ 365 (492)
.+..........| ..-|||||.+. -..++.++|||.|||.+||++ .|..||.+-.+.+.+..|.+.-
T Consensus 540 ~~ed~~yYkaS~~kLPIKWmaPESIN-fRrFTtASDVWMFgVCmWEIl~lGvkPfqgvkNsDVI~~iEnGe--------- 609 (974)
T KOG4257|consen 540 YLEDDAYYKASRGKLPIKWMAPESIN-FRRFTTASDVWMFGVCMWEILSLGVKPFQGVKNSDVIGHIENGE--------- 609 (974)
T ss_pred hccccchhhccccccceeecCccccc-hhcccchhhHHHHHHHHHHHHHhcCCccccccccceEEEecCCC---------
Confidence 8866554444444 45699999983 445899999999999999998 5999999977766555443311
Q ss_pred hcCCCCcccCCCcccCCCcccccCCCCChhHhhhhccccccCCCCcCCHHHhh
Q 011138 366 CMNPNYTEFKFPQIKAHPWHKIFHKRMPPEALDLVSRLLQYSPSLRCTALEAC 418 (492)
Q Consensus 366 ~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~Li~~~L~~dP~~R~t~~e~l 418 (492)
.. ..++++|+.+..|+.+||++||.+||+..++.
T Consensus 610 ---------Rl----------P~P~nCPp~LYslmskcWayeP~kRPrftei~ 643 (974)
T KOG4257|consen 610 ---------RL----------PCPPNCPPALYSLMSKCWAYEPSKRPRFTEIK 643 (974)
T ss_pred ---------CC----------CCCCCCChHHHHHHHHHhccCcccCCcHHHHH
Confidence 11 13467899999999999999999999876543
No 387
>KOG1094 consensus Discoidin domain receptor DDR1 [Signal transduction mechanisms]
Probab=100.00 E-value=4.5e-35 Score=291.16 Aligned_cols=250 Identities=22% Similarity=0.278 Sum_probs=194.6
Q ss_pred ceeEeeeeccCCceEEEEEEEcCCCCEEEEEEeccc-----hhhHHHHHHHHHHcCCCCccccceeeeeccCCCceEEEE
Q 011138 138 SYMAERVVGTGSFGVVFQAKCLETGDSVAIKKVLQD-----KRYKNRELQIMRLLNHPNVVSLKHCFFSTTEKDELYLNL 212 (492)
Q Consensus 138 ~y~~~~~lG~G~fg~Vy~~~~~~~g~~vAiK~~~~~-----~~~~~~E~~il~~l~h~nIv~l~~~~~~~~~~~~~~~~l 212 (492)
...+++.||+|.||.|.+|.- ..+..||+|+++.+ ...+.+|+++|.+|+|||||+|++++...+ -+|+
T Consensus 539 ~L~~~ekiGeGqFGEVhLCev-eg~lkVAVK~Lr~~a~~~~r~~F~kEIkiLsqLkhPNIveLvGVC~~De-----Picm 612 (807)
T KOG1094|consen 539 RLRFKEKIGEGQFGEVHLCEV-EGPLKVAVKILRPDATKNARNDFLKEIKILSRLKHPNIVELLGVCVQDD-----PLCM 612 (807)
T ss_pred heehhhhhcCcccceeEEEEe-cCceEEEEeecCcccchhHHHHHHHHHHHHhccCCCCeeEEEeeeecCC-----chHH
Confidence 467889999999999999984 34689999998643 245668999999999999999999985443 3889
Q ss_pred Eeeechh-hHHHHhhhhhhcCCCcCHHHHHHHHHHHHHHHHHHHhhCCcccCCCCCCceEEcCCCCcEEEeeecCccccC
Q 011138 213 VLEYISE-TVYRVSKHYTRMNQHVPILYVQLYTYQICRALNYLHHVVGVCHRDIKPQNLLVNPHTHQLKICDFGSAKMLV 291 (492)
Q Consensus 213 V~E~~~~-~l~~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~yLH~~~givHrDlKp~NILl~~~~~~vkL~DFG~a~~~~ 291 (492)
|+||++. +|-+++....... ..-.....|+.||+.||+||.+ .++|||||.+.|+|++.+. ++||+|||+++.+.
T Consensus 613 I~EYmEnGDLnqFl~aheapt--~~t~~~vsi~tqiasgmaYLes-~nfVHrd~a~rNcLv~~e~-~iKiadfgmsR~ly 688 (807)
T KOG1094|consen 613 ITEYMENGDLNQFLSAHELPT--AETAPGVSICTQIASGMAYLES-LNFVHRDLATRNCLVDGEF-TIKIADFGMSRNLY 688 (807)
T ss_pred HHHHHhcCcHHHHHHhccCcc--cccchhHHHHHHHHHHHHHHHh-hchhhccccccceeecCcc-cEEecCcccccccc
Confidence 9999985 4444443322111 2333445699999999999997 8999999999999999988 79999999999776
Q ss_pred CCCCCc---cceeccCccCchhhcCCCCCCcchhhHHHHHHHHHHH--hCCCCCCCCChHHHHHHHHHHhCCCCHHHHhh
Q 011138 292 PGEPNI---SYICSRYYRAPELIFGATEYTTAIDMWSIGCVLAELL--LGQPLFPGESGVDQLVEIIKILGTPTREEIKC 366 (492)
Q Consensus 292 ~~~~~~---~~~gt~~y~aPE~~~~~~~~~~~~DvwSlGvil~ell--~G~~pf~~~~~~~~~~~i~~~~g~p~~~~~~~ 366 (492)
.++... ..+-...|||||.|.-.+ ++.++|+|+||+++||++ +...||...++.+...+....+..+......
T Consensus 689 sg~yy~vqgr~vlpiRwmawEsillgk-FttaSDvWafgvTlwE~~~~C~e~Py~~lt~e~vven~~~~~~~~~~~~~l- 766 (807)
T KOG1094|consen 689 SGDYYRVQGRAVLPIRWMAWESILLGK-FTTASDVWAFGVTLWEVFMLCREQPYSQLTDEQVVENAGEFFRDQGRQVVL- 766 (807)
T ss_pred cCCceeeecceeeeeeehhHHHHHhcc-ccchhhhhhhHHHHHHHHHHHhhCchhhhhHHHHHHhhhhhcCCCCcceec-
Confidence 554332 234578899999997654 899999999999999987 5789998888777666655544333221110
Q ss_pred cCCCCcccCCCcccCCCcccccCCCCChhHhhhhccccccCCCCcCCHHHhhC
Q 011138 367 MNPNYTEFKFPQIKAHPWHKIFHKRMPPEALDLVSRLLQYSPSLRCTALEACA 419 (492)
Q Consensus 367 ~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~Li~~~L~~dP~~R~t~~e~l~ 419 (492)
..+.-.+..+.+|+.+|+..|-.+||+.+++-.
T Consensus 767 --------------------~~P~~cp~~lyelml~Cw~~es~~RPsFe~lh~ 799 (807)
T KOG1094|consen 767 --------------------SRPPACPQGLYELMLRCWRRESEQRPSFEQLHL 799 (807)
T ss_pred --------------------cCCCcCcHHHHHHHHHHhchhhhcCCCHHHHHH
Confidence 122457888999999999999999999999843
No 388
>KOG0199 consensus ACK and related non-receptor tyrosine kinases [Signal transduction mechanisms]
Probab=100.00 E-value=5e-36 Score=302.97 Aligned_cols=249 Identities=23% Similarity=0.323 Sum_probs=200.6
Q ss_pred ceeEeeeeccCCceEEEEEEEcCCC---CEEEEEEeccch-----hhHHHHHHHHHHcCCCCccccceeeeeccCCCceE
Q 011138 138 SYMAERVVGTGSFGVVFQAKCLETG---DSVAIKKVLQDK-----RYKNRELQIMRLLNHPNVVSLKHCFFSTTEKDELY 209 (492)
Q Consensus 138 ~y~~~~~lG~G~fg~Vy~~~~~~~g---~~vAiK~~~~~~-----~~~~~E~~il~~l~h~nIv~l~~~~~~~~~~~~~~ 209 (492)
+..+.++||+|+||.|++|.|...+ -.||||.+..+. ..+.+|+.+|.+|+|+|+++||++..+. -
T Consensus 111 ~i~l~e~LG~GsFgvV~rg~Wt~psgk~V~VAVKclr~d~l~~~mddflrEas~M~~L~H~hliRLyGvVl~q------p 184 (1039)
T KOG0199|consen 111 QIKLYELLGEGSFGVVKRGTWTQPSGKHVNVAVKCLRDDSLNAIMDDFLREASHMLKLQHPHLIRLYGVVLDQ------P 184 (1039)
T ss_pred HHHHHHHhcCcceeeEeeccccCCCCcEEeEEEEeccCCccchhHHHHHHHHHHHHhccCcceeEEeeeeccc------h
Confidence 3556788999999999999987543 358999986653 3456899999999999999999998542 2
Q ss_pred EEEEeeechh-hHHHHhhhhhhcCCCcCHHHHHHHHHHHHHHHHHHHhhCCcccCCCCCCceEEcCCCCcEEEeeecCcc
Q 011138 210 LNLVLEYISE-TVYRVSKHYTRMNQHVPILYVQLYTYQICRALNYLHHVVGVCHRDIKPQNLLVNPHTHQLKICDFGSAK 288 (492)
Q Consensus 210 ~~lV~E~~~~-~l~~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~yLH~~~givHrDlKp~NILl~~~~~~vkL~DFG~a~ 288 (492)
+.||||++.+ +|++.+.. .....|.......|+.||+.||.||.. +++|||||...|||+-... .|||+|||+.+
T Consensus 185 ~mMV~ELaplGSLldrLrk--a~~~~llv~~Lcdya~QiA~aM~YLes-krlvHRDLAARNlllaspr-tVKI~DFGLmR 260 (1039)
T KOG0199|consen 185 AMMVFELAPLGSLLDRLRK--AKKAILLVSRLCDYAMQIAKAMQYLES-KRLVHRDLAARNLLLASPR-TVKICDFGLMR 260 (1039)
T ss_pred hhHHhhhcccchHHHHHhh--ccccceeHHHHHHHHHHHHHHHHHHhh-hhhhhhhhhhhhheecccc-eeeeeccccee
Confidence 5699999985 55554433 345678888899999999999999996 9999999999999998766 89999999999
Q ss_pred ccCCCCCCcccee----ccCccCchhhcCCCCCCcchhhHHHHHHHHHHHh-CCCCCCCCChHHHHHHHHHHhCCCCHHH
Q 011138 289 MLVPGEPNISYIC----SRYYRAPELIFGATEYTTAIDMWSIGCVLAELLL-GQPLFPGESGVDQLVEIIKILGTPTREE 363 (492)
Q Consensus 289 ~~~~~~~~~~~~g----t~~y~aPE~~~~~~~~~~~~DvwSlGvil~ell~-G~~pf~~~~~~~~~~~i~~~~g~p~~~~ 363 (492)
.+..++......+ ...|+|||.+... .++.++|||++||++|||++ |..||.|....+.+.+|-+..
T Consensus 261 aLg~ned~Yvm~p~rkvPfAWCaPEsLrh~-kFShaSDvWmyGVTiWEMFtyGEePW~G~~g~qIL~~iD~~e------- 332 (1039)
T KOG0199|consen 261 ALGENEDMYVMAPQRKVPFAWCAPESLRHR-KFSHASDVWMYGVTIWEMFTYGEEPWVGCRGIQILKNIDAGE------- 332 (1039)
T ss_pred ccCCCCcceEecCCCcCcccccCHhHhccc-cccccchhhhhhhhHHhhhccCCCCCCCCCHHHHHHhccccc-------
Confidence 8876665543322 4569999999654 59999999999999999996 899999999887777664311
Q ss_pred HhhcCCCCcccCCCcccCCCcccccCCCCChhHhhhhccccccCCCCcCCHHHhhCCCCCCC
Q 011138 364 IKCMNPNYTEFKFPQIKAHPWHKIFHKRMPPEALDLVSRLLQYSPSLRCTALEACAHPFFDD 425 (492)
Q Consensus 364 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~Li~~~L~~dP~~R~t~~e~l~Hp~f~~ 425 (492)
.++ -++.+++++.++++.||..+|++|||...|...-+...
T Consensus 333 -----------rLp----------RPk~csedIY~imk~cWah~paDRptFsair~~~~l~e 373 (1039)
T KOG0199|consen 333 -----------RLP----------RPKYCSEDIYQIMKNCWAHNPADRPTFSAIREDLVLAE 373 (1039)
T ss_pred -----------cCC----------CCCCChHHHHHHHHHhccCCccccccHHHHHHhHHHHh
Confidence 111 12457999999999999999999999999875545443
No 389
>smart00220 S_TKc Serine/Threonine protein kinases, catalytic domain. Phosphotransferases. Serine or threonine-specific kinase subfamily.
Probab=100.00 E-value=2.5e-34 Score=272.86 Aligned_cols=238 Identities=39% Similarity=0.665 Sum_probs=190.7
Q ss_pred CceEEEEEEEcCCCCEEEEEEeccc-----hhhHHHHHHHHHHcCCCCccccceeeeeccCCCceEEEEEeeechh-hHH
Q 011138 149 SFGVVFQAKCLETGDSVAIKKVLQD-----KRYKNRELQIMRLLNHPNVVSLKHCFFSTTEKDELYLNLVLEYISE-TVY 222 (492)
Q Consensus 149 ~fg~Vy~~~~~~~g~~vAiK~~~~~-----~~~~~~E~~il~~l~h~nIv~l~~~~~~~~~~~~~~~~lV~E~~~~-~l~ 222 (492)
+||.||+|.+..+|+.+|+|++... .....+|+.+++.++|+||+++++++.. ....++|+||+++ .+.
T Consensus 1 ~~g~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~e~~~~~~l~~~~i~~~~~~~~~-----~~~~~l~~e~~~~~~L~ 75 (244)
T smart00220 1 SFGKVYLARDKKTGKLVAIKVIKKEKIKKKRERILREISILKKLKHPNIVRLYDVFED-----EDKLYLVMEYCDGGDLF 75 (244)
T ss_pred CceEEEEEEECCCCcEEEEEEecccccccHHHHHHHHHHHHHhCCCCcHHHHHhheee-----CCEEEEEEeCCCCCCHH
Confidence 5899999999999999999998543 3456689999999999999999998843 3468899999998 555
Q ss_pred HHhhhhhhcCCCcCHHHHHHHHHHHHHHHHHHHhhCCcccCCCCCCceEEcCCCCcEEEeeecCccccCCCCCCccceec
Q 011138 223 RVSKHYTRMNQHVPILYVQLYTYQICRALNYLHHVVGVCHRDIKPQNLLVNPHTHQLKICDFGSAKMLVPGEPNISYICS 302 (492)
Q Consensus 223 ~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~yLH~~~givHrDlKp~NILl~~~~~~vkL~DFG~a~~~~~~~~~~~~~gt 302 (492)
..+.. ...++...+..++.+++.+|.|||+ .||+|+||+|.||+++.++ .++|+|||.+.............++
T Consensus 76 ~~~~~----~~~~~~~~~~~~~~~l~~~l~~lh~-~~i~h~~i~~~ni~~~~~~-~~~l~d~~~~~~~~~~~~~~~~~~~ 149 (244)
T smart00220 76 DLLKK----RGRLSEDEARFYARQILSALEYLHS-NGIIHRDLKPENILLDEDG-HVKLADFGLARQLDPGGLLTTFVGT 149 (244)
T ss_pred HHHHh----ccCCCHHHHHHHHHHHHHHHHHHHH-cCeecCCcCHHHeEECCCC-cEEEccccceeeeccccccccccCC
Confidence 44332 2237888999999999999999997 8999999999999999887 7999999999877555445567789
Q ss_pred cCccCchhhcCCCCCCcchhhHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCCHHHHhhcCCCCcccCCCcccCC
Q 011138 303 RYYRAPELIFGATEYTTAIDMWSIGCVLAELLLGQPLFPGESGVDQLVEIIKILGTPTREEIKCMNPNYTEFKFPQIKAH 382 (492)
Q Consensus 303 ~~y~aPE~~~~~~~~~~~~DvwSlGvil~ell~G~~pf~~~~~~~~~~~i~~~~g~p~~~~~~~~~~~~~~~~~~~~~~~ 382 (492)
..|++||.+.+. .++.++|+||||+++|+|++|..||........+.+.... .. .....
T Consensus 150 ~~~~~pE~~~~~-~~~~~~Di~slG~~l~~l~~~~~p~~~~~~~~~~~~~~~~---~~-------------~~~~~---- 208 (244)
T smart00220 150 PEYMAPEVLLGK-GYGKAVDVWSLGVILYELLTGKPPFPGDDQLLELFKKIGK---PK-------------PPFPP---- 208 (244)
T ss_pred cCCCCHHHHccC-CCCchhhHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHhc---cC-------------CCCcc----
Confidence 999999998644 4788999999999999999999999874433333333221 00 00000
Q ss_pred CcccccCCCCChhHhhhhccccccCCCCcCCHHHhhCCCCC
Q 011138 383 PWHKIFHKRMPPEALDLVSRLLQYSPSLRCTALEACAHPFF 423 (492)
Q Consensus 383 ~~~~~~~~~~s~~~~~Li~~~L~~dP~~R~t~~e~l~Hp~f 423 (492)
....++.++.+++.+||..||++||++.++++||||
T Consensus 209 -----~~~~~~~~~~~~i~~~l~~~p~~Rp~~~~~~~~~~~ 244 (244)
T smart00220 209 -----PEWKISPEAKDLIRKLLVKDPEKRLTAEEALQHPFF 244 (244)
T ss_pred -----ccccCCHHHHHHHHHHccCCchhccCHHHHhhCCCC
Confidence 001167899999999999999999999999999997
No 390
>KOG0196 consensus Tyrosine kinase, EPH (ephrin) receptor family [Signal transduction mechanisms]
Probab=100.00 E-value=4.1e-36 Score=307.29 Aligned_cols=244 Identities=24% Similarity=0.348 Sum_probs=204.1
Q ss_pred ceeEeeeeccCCceEEEEEEEcCCCC---EEEEEEecc-----chhhHHHHHHHHHHcCCCCccccceeeeeccCCCceE
Q 011138 138 SYMAERVVGTGSFGVVFQAKCLETGD---SVAIKKVLQ-----DKRYKNRELQIMRLLNHPNVVSLKHCFFSTTEKDELY 209 (492)
Q Consensus 138 ~y~~~~~lG~G~fg~Vy~~~~~~~g~---~vAiK~~~~-----~~~~~~~E~~il~~l~h~nIv~l~~~~~~~~~~~~~~ 209 (492)
.-.+.++||.|.||.||+|..+..|+ .||||.++. .+..+..|+.||-+++||||++|.++. ....-
T Consensus 630 ~i~Ie~VIGaGEFGEVc~GrLk~pgkre~~VAIKTLK~GytekqrrdFL~EAsIMGQFdHPNIIrLEGVV-----Tks~P 704 (996)
T KOG0196|consen 630 CVKIEKVIGAGEFGEVCSGRLKLPGKREITVAIKTLKAGYTEKQRRDFLSEASIMGQFDHPNIIRLEGVV-----TKSKP 704 (996)
T ss_pred heEEEEEEecccccceecccccCCCCcceeEEEeeeccCccHHHHhhhhhhhhhcccCCCCcEEEEEEEE-----ecCce
Confidence 35688999999999999999887764 599999854 344556799999999999999999988 33445
Q ss_pred EEEEeeechhhHHHHhhhhhhcCCCcCHHHHHHHHHHHHHHHHHHHhhCCcccCCCCCCceEEcCCCCcEEEeeecCccc
Q 011138 210 LNLVLEYISETVYRVSKHYTRMNQHVPILYVQLYTYQICRALNYLHHVVGVCHRDIKPQNLLVNPHTHQLKICDFGSAKM 289 (492)
Q Consensus 210 ~~lV~E~~~~~l~~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~yLH~~~givHrDlKp~NILl~~~~~~vkL~DFG~a~~ 289 (492)
+.||.|||+.+.++.+.+ .....|...+..-+++.|+.|++||-+ .|+|||||...||||+.+- .+|++|||+++.
T Consensus 705 vMIiTEyMENGsLDsFLR--~~DGqftviQLVgMLrGIAsGMkYLsd-m~YVHRDLAARNILVNsnL-vCKVsDFGLSRv 780 (996)
T KOG0196|consen 705 VMIITEYMENGSLDSFLR--QNDGQFTVIQLVGMLRGIASGMKYLSD-MNYVHRDLAARNILVNSNL-VCKVSDFGLSRV 780 (996)
T ss_pred eEEEhhhhhCCcHHHHHh--hcCCceEeehHHHHHHHHHHHhHHHhh-cCchhhhhhhhheeeccce-EEEeccccceee
Confidence 889999999765554332 234668888899999999999999998 8999999999999999988 899999999998
Q ss_pred cCCCCC-Ccc-cee--ccCccCchhhcCCCCCCcchhhHHHHHHHHHHH-hCCCCCCCCChHHHHHHHHHHhCCCCHHHH
Q 011138 290 LVPGEP-NIS-YIC--SRYYRAPELIFGATEYTTAIDMWSIGCVLAELL-LGQPLFPGESGVDQLVEIIKILGTPTREEI 364 (492)
Q Consensus 290 ~~~~~~-~~~-~~g--t~~y~aPE~~~~~~~~~~~~DvwSlGvil~ell-~G~~pf~~~~~~~~~~~i~~~~g~p~~~~~ 364 (492)
+.++.+ ..+ ..| ...|.|||.|.- .+++.++||||+|++|||.+ .|..||...++.+.+..|.+.++.|++.
T Consensus 781 ledd~~~~ytt~GGKIPiRWTAPEAIa~-RKFTsASDVWSyGIVmWEVmSyGERPYWdmSNQdVIkaIe~gyRLPpPm-- 857 (996)
T KOG0196|consen 781 LEDDPEAAYTTLGGKIPIRWTAPEAIAY-RKFTSASDVWSYGIVMWEVMSYGERPYWDMSNQDVIKAIEQGYRLPPPM-- 857 (996)
T ss_pred cccCCCccccccCCccceeecChhHhhh-cccCchhhccccceEEEEecccCCCcccccchHHHHHHHHhccCCCCCC--
Confidence 755442 222 222 467999999954 45999999999999999987 6999999999999999998877666543
Q ss_pred hhcCCCCcccCCCcccCCCcccccCCCCChhHhhhhccccccCCCCcCCHHHhhC
Q 011138 365 KCMNPNYTEFKFPQIKAHPWHKIFHKRMPPEALDLVSRLLQYSPSLRCTALEACA 419 (492)
Q Consensus 365 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~Li~~~L~~dP~~R~t~~e~l~ 419 (492)
+.|..+..|+..||++|-.+||+..||++
T Consensus 858 --------------------------DCP~aL~qLMldCWqkdR~~RP~F~qiV~ 886 (996)
T KOG0196|consen 858 --------------------------DCPAALYQLMLDCWQKDRNRRPKFAQIVS 886 (996)
T ss_pred --------------------------CCcHHHHHHHHHHHHHHhhcCCCHHHHHH
Confidence 47889999999999999999999999886
No 391
>KOG4278 consensus Protein tyrosine kinase [Signal transduction mechanisms]
Probab=100.00 E-value=6.5e-35 Score=291.17 Aligned_cols=242 Identities=23% Similarity=0.364 Sum_probs=195.4
Q ss_pred ceeEeeeeccCCceEEEEEEEcCCCCEEEEEEeccchh---hHHHHHHHHHHcCCCCccccceeeeeccCCCceEEEEEe
Q 011138 138 SYMAERVVGTGSFGVVFQAKCLETGDSVAIKKVLQDKR---YKNRELQIMRLLNHPNVVSLKHCFFSTTEKDELYLNLVL 214 (492)
Q Consensus 138 ~y~~~~~lG~G~fg~Vy~~~~~~~g~~vAiK~~~~~~~---~~~~E~~il~~l~h~nIv~l~~~~~~~~~~~~~~~~lV~ 214 (492)
+....++||-|.||.||.|.|+.-.-.||||.++.+.. .+..|..+|+.++|||+|+|+++| ....-+|||+
T Consensus 268 dItMkhKLGGGQYGeVYeGvWKkyslTvAVKtLKEDtMeveEFLkEAAvMKeikHpNLVqLLGVC-----T~EpPFYIiT 342 (1157)
T KOG4278|consen 268 DITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVC-----THEPPFYIIT 342 (1157)
T ss_pred heeeeeccCCCcccceeeeeeeccceeeehhhhhhcchhHHHHHHHHHHHHhhcCccHHHHhhhh-----ccCCCeEEEE
Confidence 45566789999999999999999999999999987754 445799999999999999999999 3444489999
Q ss_pred eech-hhHHHHhhhhhhcCCCcCHHHHHHHHHHHHHHHHHHHhhCCcccCCCCCCceEEcCCCCcEEEeeecCccccCCC
Q 011138 215 EYIS-ETVYRVSKHYTRMNQHVPILYVQLYTYQICRALNYLHHVVGVCHRDIKPQNLLVNPHTHQLKICDFGSAKMLVPG 293 (492)
Q Consensus 215 E~~~-~~l~~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~yLH~~~givHrDlKp~NILl~~~~~~vkL~DFG~a~~~~~~ 293 (492)
|||. |.|++.+....+ ..++......++.||..|++||.. +++|||||...|+|+..+. .||++|||+++.+..+
T Consensus 343 EfM~yGNLLdYLRecnr--~ev~avvLlyMAtQIsSaMeYLEk-knFIHRDLAARNCLVgEnh-iVKvADFGLsRlMtgD 418 (1157)
T KOG4278|consen 343 EFMCYGNLLDYLRECNR--SEVPAVVLLYMATQISSAMEYLEK-KNFIHRDLAARNCLVGENH-IVKVADFGLSRLMTGD 418 (1157)
T ss_pred ecccCccHHHHHHHhch--hhcchhHHHHHHHHHHHHHHHHHH-hhhhhhhhhhhhccccccc-eEEeeccchhhhhcCC
Confidence 9997 677776654332 446666778889999999999997 9999999999999999876 8999999999987543
Q ss_pred CCCcccee---ccCccCchhhcCCCCCCcchhhHHHHHHHHHHHh-CCCCCCCCChHHHHHHHHHHhCCCCHHHHhhcCC
Q 011138 294 EPNISYIC---SRYYRAPELIFGATEYTTAIDMWSIGCVLAELLL-GQPLFPGESGVDQLVEIIKILGTPTREEIKCMNP 369 (492)
Q Consensus 294 ~~~~~~~g---t~~y~aPE~~~~~~~~~~~~DvwSlGvil~ell~-G~~pf~~~~~~~~~~~i~~~~g~p~~~~~~~~~~ 369 (492)
. .+...| ..-|.|||-+.- ..++.++|||+|||+|||+.| |-.||++.+-.+.+..+.+.+..
T Consensus 419 T-YTAHAGAKFPIKWTAPEsLAy-NtFSiKSDVWAFGVLLWEIATYGMsPYPGidlSqVY~LLEkgyRM----------- 485 (1157)
T KOG4278|consen 419 T-YTAHAGAKFPIKWTAPESLAY-NTFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYGLLEKGYRM----------- 485 (1157)
T ss_pred c-eecccCccCcccccCcccccc-cccccchhhHHHHHHHHHHHhcCCCCCCCccHHHHHHHHhccccc-----------
Confidence 3 333333 566999998843 348899999999999999996 99999998765555444332111
Q ss_pred CCcccCCCcccCCCcccccCCCCChhHhhhhccccccCCCCcCCHHHhh
Q 011138 370 NYTEFKFPQIKAHPWHKIFHKRMPPEALDLVSRLLQYSPSLRCTALEAC 418 (492)
Q Consensus 370 ~~~~~~~~~~~~~~~~~~~~~~~s~~~~~Li~~~L~~dP~~R~t~~e~l 418 (492)
+ -+..+++.+.+|++.||+++|.+||+..|+-
T Consensus 486 -----~------------~PeGCPpkVYeLMraCW~WsPsDRPsFaeiH 517 (1157)
T KOG4278|consen 486 -----D------------GPEGCPPKVYELMRACWNWSPSDRPSFAEIH 517 (1157)
T ss_pred -----c------------CCCCCCHHHHHHHHHHhcCCcccCccHHHHH
Confidence 1 1246899999999999999999999988763
No 392
>KOG0984 consensus Mitogen-activated protein kinase (MAPK) kinase MKK3/MKK6 [Signal transduction mechanisms]
Probab=100.00 E-value=8.4e-35 Score=255.78 Aligned_cols=211 Identities=24% Similarity=0.431 Sum_probs=174.0
Q ss_pred ceeEeeeeccCCceEEEEEEEcCCCCEEEEEEeccch-----hhHHHHHHHHH-HcCCCCccccceeeeeccCCCceEEE
Q 011138 138 SYMAERVVGTGSFGVVFQAKCLETGDSVAIKKVLQDK-----RYKNRELQIMR-LLNHPNVVSLKHCFFSTTEKDELYLN 211 (492)
Q Consensus 138 ~y~~~~~lG~G~fg~Vy~~~~~~~g~~vAiK~~~~~~-----~~~~~E~~il~-~l~h~nIv~l~~~~~~~~~~~~~~~~ 211 (492)
....+..||+|+||.|-+.++..+|...|+|.+...- ....+|+.+.. ...+|.+|++|+.++...+ ++
T Consensus 47 ~L~~i~elGrGayG~vekmrh~~sg~imAvKri~~tvn~q~q~r~L~dldi~~r~~~CPf~V~FyGa~~regd-----vw 121 (282)
T KOG0984|consen 47 DLVGIEELGRGAYGVVEKMRHIQSGTIMAVKRIRATVNSQEQKRLLMDLDIIMRTVDCPFTVHFYGALFREGD-----VW 121 (282)
T ss_pred hhhhhhhhcCCccchhhheeeccCCeEEEEeeehhhcChHHHHHHHHhhhhhccCCCCCeEEEeehhhhcccc-----EE
Confidence 3445567999999999999999999999999885322 22235666644 4469999999998855544 89
Q ss_pred EEeeechhhHHHHhhhhhhcCCCcCHHHHHHHHHHHHHHHHHHHhhCCcccCCCCCCceEEcCCCCcEEEeeecCccccC
Q 011138 212 LVLEYISETVYRVSKHYTRMNQHVPILYVQLYTYQICRALNYLHHVVGVCHRDIKPQNLLVNPHTHQLKICDFGSAKMLV 291 (492)
Q Consensus 212 lV~E~~~~~l~~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~yLH~~~givHrDlKp~NILl~~~~~~vkL~DFG~a~~~~ 291 (492)
|.||.|..++..+..+....+..+++..+-+|+..++.||.|||+...|||||+||+||||+.+| +||+||||++..+.
T Consensus 122 IcME~M~tSldkfy~~v~~~g~~ipE~vlGkIa~Svv~al~~L~~kL~vIHRDvKPsNiLIn~~G-qVKiCDFGIsG~L~ 200 (282)
T KOG0984|consen 122 ICMELMDTSLDKFYRKVLKKGGTIPEDVLGKIAVSVVHALEFLHSKLSVIHRDVKPSNILINYDG-QVKICDFGISGYLV 200 (282)
T ss_pred EeHHHhhhhHHHHHHHHHhcCCcCchHHhhHhHHHHHHHHHHHHHHhhhhhccCCcceEEEccCC-cEEEcccccceeeh
Confidence 99999998888777777778899999999999999999999999867999999999999999998 89999999998776
Q ss_pred CCCCCccceeccCccCchhhcC---CCCCCcchhhHHHHHHHHHHHhCCCCCCCC-ChHHHHHHHHH
Q 011138 292 PGEPNISYICSRYYRAPELIFG---ATEYTTAIDMWSIGCVLAELLLGQPLFPGE-SGVDQLVEIIK 354 (492)
Q Consensus 292 ~~~~~~~~~gt~~y~aPE~~~~---~~~~~~~~DvwSlGvil~ell~G~~pf~~~-~~~~~~~~i~~ 354 (492)
+.-..+-..|...|||||.+.. ...|+-++||||||+++.||.+++.||... +.-+++.++++
T Consensus 201 dSiAkt~daGCkpYmaPEri~~e~n~~gY~vksDvWSLGItmiElA~lr~PY~~w~tpF~qLkqvVe 267 (282)
T KOG0984|consen 201 DSIAKTMDAGCKPYMAPERINPELNQKGYSVKSDVWSLGITMIEMAILRFPYESWGTPFQQLKQVVE 267 (282)
T ss_pred hhhHHHHhcCCCccCChhhcCcccCcccceeehhhhhhhhhhhhhhhccccccccCCHHHHHHHHhc
Confidence 5555555678889999999843 335899999999999999999999999764 45555555544
No 393
>PLN00113 leucine-rich repeat receptor-like protein kinase; Provisional
Probab=100.00 E-value=4.2e-34 Score=325.28 Aligned_cols=252 Identities=22% Similarity=0.309 Sum_probs=181.9
Q ss_pred ceeEeeeeccCCceEEEEEEEcCCCCEEEEEEeccchhhHHHHHHHHHHcCCCCccccceeeeeccCCCceEEEEEeeec
Q 011138 138 SYMAERVVGTGSFGVVFQAKCLETGDSVAIKKVLQDKRYKNRELQIMRLLNHPNVVSLKHCFFSTTEKDELYLNLVLEYI 217 (492)
Q Consensus 138 ~y~~~~~lG~G~fg~Vy~~~~~~~g~~vAiK~~~~~~~~~~~E~~il~~l~h~nIv~l~~~~~~~~~~~~~~~~lV~E~~ 217 (492)
.|...++||+|+||.||+|.+..+|..||||++........+|++++++++|||||++++++.. ....|+||||+
T Consensus 691 ~~~~~~~ig~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~l~~l~HpnIv~~~~~~~~-----~~~~~lv~Ey~ 765 (968)
T PLN00113 691 SLKEENVISRGKKGASYKGKSIKNGMQFVVKEINDVNSIPSSEIADMGKLQHPNIVKLIGLCRS-----EKGAYLIHEYI 765 (968)
T ss_pred hCCcccEEccCCCeeEEEEEECCCCcEEEEEEccCCccccHHHHHHHhhCCCCCcceEEEEEEc-----CCCCEEEEeCC
Confidence 3566778999999999999999999999999987655555678999999999999999999843 33478999999
Q ss_pred hhhHH-HHhhhhhhcCCCcCHHHHHHHHHHHHHHHHHHH---hhCCcccCCCCCCceEEcCCCCcEEEeeecCccccCCC
Q 011138 218 SETVY-RVSKHYTRMNQHVPILYVQLYTYQICRALNYLH---HVVGVCHRDIKPQNLLVNPHTHQLKICDFGSAKMLVPG 293 (492)
Q Consensus 218 ~~~l~-~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~yLH---~~~givHrDlKp~NILl~~~~~~vkL~DFG~a~~~~~~ 293 (492)
+++.+ +.+. .+++..+..++.||+.||+||| + .+|+||||||+||+++.++ ..++. ||.+.....
T Consensus 766 ~~g~L~~~l~-------~l~~~~~~~i~~~ia~~L~yLH~~~~-~~iiH~dlkp~Nil~~~~~-~~~~~-~~~~~~~~~- 834 (968)
T PLN00113 766 EGKNLSEVLR-------NLSWERRRKIAIGIAKALRFLHCRCS-PAVVVGNLSPEKIIIDGKD-EPHLR-LSLPGLLCT- 834 (968)
T ss_pred CCCcHHHHHh-------cCCHHHHHHHHHHHHHHHHHhccCCC-CCeecCCCCHHhEEECCCC-ceEEE-ecccccccc-
Confidence 86544 3332 3778889999999999999999 5 6999999999999999776 56665 666543321
Q ss_pred CCCccceeccCccCchhhcCCCCCCcchhhHHHHHHHHHHHhCCCCCCCCChH-HHHHHHHHHhCCCCHHHHhhcCCCCc
Q 011138 294 EPNISYICSRYYRAPELIFGATEYTTAIDMWSIGCVLAELLLGQPLFPGESGV-DQLVEIIKILGTPTREEIKCMNPNYT 372 (492)
Q Consensus 294 ~~~~~~~gt~~y~aPE~~~~~~~~~~~~DvwSlGvil~ell~G~~pf~~~~~~-~~~~~i~~~~g~p~~~~~~~~~~~~~ 372 (492)
.....||+.|+|||++.+. .++.++|||||||++|||++|+.||...... ..+.+..+..-... .. .
T Consensus 835 --~~~~~~t~~y~aPE~~~~~-~~~~~sDv~S~Gvvl~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~--~~-------~ 902 (968)
T PLN00113 835 --DTKCFISSAYVAPETRETK-DITEKSDIYGFGLILIELLTGKSPADAEFGVHGSIVEWARYCYSDC--HL-------D 902 (968)
T ss_pred --CCCccccccccCcccccCC-CCCcccchhhHHHHHHHHHhCCCCCCcccCCCCcHHHHHHHhcCcc--ch-------h
Confidence 2234788999999998654 5899999999999999999999999543211 11111111100000 00 0
Q ss_pred ccCCCcccCCCcccccCCCCChhHhhhhccccccCCCCcCCHHHhhCC
Q 011138 373 EFKFPQIKAHPWHKIFHKRMPPEALDLVSRLLQYSPSLRCTALEACAH 420 (492)
Q Consensus 373 ~~~~~~~~~~~~~~~~~~~~s~~~~~Li~~~L~~dP~~R~t~~e~l~H 420 (492)
.+.-|.+... . ........++.+++.+||+.||++|||+.|+++.
T Consensus 903 ~~~~~~~~~~-~--~~~~~~~~~~~~l~~~Cl~~~P~~RPt~~evl~~ 947 (968)
T PLN00113 903 MWIDPSIRGD-V--SVNQNEIVEVMNLALHCTATDPTARPCANDVLKT 947 (968)
T ss_pred heeCccccCC-C--CccHHHHHHHHHHHHhhCcCCchhCcCHHHHHHH
Confidence 0000110000 0 0001123457799999999999999999999874
No 394
>KOG1152 consensus Signal transduction serine/threonine kinase with PAS/PAC sensor domain [Signal transduction mechanisms]
Probab=100.00 E-value=3.2e-34 Score=284.90 Aligned_cols=202 Identities=26% Similarity=0.424 Sum_probs=175.9
Q ss_pred CCCccccceeEeeeeccCCceEEEEEEEcCCCCEEEEEEeccchhhHH------------HHHHHHHHcC---CCCcccc
Q 011138 131 GQPKQTISYMAERVVGTGSFGVVFQAKCLETGDSVAIKKVLQDKRYKN------------RELQIMRLLN---HPNVVSL 195 (492)
Q Consensus 131 ~~~~~~~~y~~~~~lG~G~fg~Vy~~~~~~~g~~vAiK~~~~~~~~~~------------~E~~il~~l~---h~nIv~l 195 (492)
+.+++..+|...+.+|.|+||.|++|.++.+...|.||.+.+.+-... .|++||..|+ |+||+++
T Consensus 555 ~~~~k~s~yttlq~lG~GAyGkV~lai~K~n~~eVViK~I~KeRIL~DtWvrDrkLGtVp~EIqIla~l~~~sH~NIlKl 634 (772)
T KOG1152|consen 555 KEYKKFSDYTTLQPLGEGAYGKVNLAIHKENNYEVVIKMIFKERILVDTWVRDRKLGTVPSEIQILATLNKHSHENILKL 634 (772)
T ss_pred eeecccccceeeeeccccccceEEEeeecccceEEEeeehhhhhhhhhhhhcccccCccchhHHHHHHhhhcCccchhhh
Confidence 345666789999999999999999999999999999999877653322 5999999998 9999999
Q ss_pred ceeeeeccCCCceEEEEEeeechhhHHHHhhhhhhcCCCcCHHHHHHHHHHHHHHHHHHHhhCCcccCCCCCCceEEcCC
Q 011138 196 KHCFFSTTEKDELYLNLVLEYISETVYRVSKHYTRMNQHVPILYVQLYTYQICRALNYLHHVVGVCHRDIKPQNLLVNPH 275 (492)
Q Consensus 196 ~~~~~~~~~~~~~~~~lV~E~~~~~l~~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~yLH~~~givHrDlKp~NILl~~~ 275 (492)
+++| +++.|+||+||-.+.+ .+++ .+......+++.+++.|++||+.|+++||+ +||||||||-+||.++.+
T Consensus 635 LdfF-----Eddd~yyl~te~hg~g-IDLF-d~IE~kp~m~E~eAk~IFkQV~agi~hlh~-~~ivhrdikdenvivd~~ 706 (772)
T KOG1152|consen 635 LDFF-----EDDDYYYLETEVHGEG-IDLF-DFIEFKPRMDEPEAKLIFKQVVAGIKHLHD-QGIVHRDIKDENVIVDSN 706 (772)
T ss_pred hhee-----ecCCeeEEEecCCCCC-cchh-hhhhccCccchHHHHHHHHHHHhccccccc-cCceecccccccEEEecC
Confidence 9999 8888999999998765 2222 233446789999999999999999999997 999999999999999999
Q ss_pred CCcEEEeeecCccccCCCCCCccceeccCccCchhhcCCCCCCcchhhHHHHHHHHHHHhCCCCCCC
Q 011138 276 THQLKICDFGSAKMLVPGEPNISYICSRYYRAPELIFGATEYTTAIDMWSIGCVLAELLLGQPLFPG 342 (492)
Q Consensus 276 ~~~vkL~DFG~a~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DvwSlGvil~ell~G~~pf~~ 342 (492)
| -+||+|||.|... ...+...++||..|.|||++.|..+.+..-|||++|++||.++....||..
T Consensus 707 g-~~klidfgsaa~~-ksgpfd~f~gtv~~aapevl~g~~y~gk~qdiwalgillytivykenpyyn 771 (772)
T KOG1152|consen 707 G-FVKLIDFGSAAYT-KSGPFDVFVGTVDYAAPEVLGGEKYLGKPQDIWALGILLYTIVYKENPYYN 771 (772)
T ss_pred C-eEEEeeccchhhh-cCCCcceeeeeccccchhhhCCCccCCCcchhhhhhheeeEEEeccCCCcC
Confidence 8 7999999998754 455677899999999999998888889999999999999999999989864
No 395
>KOG2052 consensus Activin A type IB receptor, serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=7.8e-33 Score=268.18 Aligned_cols=269 Identities=24% Similarity=0.315 Sum_probs=188.9
Q ss_pred ecCCCCCCCcccc-----ceeEeeeeccCCceEEEEEEEcCCCCEEEEEEecc-chhhHHHHHHHHH--HcCCCCccccc
Q 011138 125 TVGGRNGQPKQTI-----SYMAERVVGTGSFGVVFQAKCLETGDSVAIKKVLQ-DKRYKNRELQIMR--LLNHPNVVSLK 196 (492)
Q Consensus 125 ~~~~~~~~~~~~~-----~y~~~~~lG~G~fg~Vy~~~~~~~g~~vAiK~~~~-~~~~~~~E~~il~--~l~h~nIv~l~ 196 (492)
+.|+..|.|.... +-.+.+.||+|.||.||+|.+ -|+.||||++.. ++....||.+|.+ .|+|+||+.++
T Consensus 194 tSGSGSGlplLVQRTiarqI~L~e~IGkGRyGEVwrG~w--rGe~VAVKiF~srdE~SWfrEtEIYqTvmLRHENILgFI 271 (513)
T KOG2052|consen 194 TSGSGSGLPLLVQRTIARQIVLQEIIGKGRFGEVWRGRW--RGEDVAVKIFSSRDERSWFRETEIYQTVMLRHENILGFI 271 (513)
T ss_pred cCCCCCCchhHhHHhhhheeEEEEEecCccccceeeccc--cCCceEEEEecccchhhhhhHHHHHHHHHhccchhhhhh
Confidence 4555566664432 578899999999999999998 689999999854 4555566777755 67999999987
Q ss_pred eeeeeccCCCceEEEEEeeech-hhHHHHhhhhhhcCCCcCHHHHHHHHHHHHHHHHHHHh-------hCCcccCCCCCC
Q 011138 197 HCFFSTTEKDELYLNLVLEYIS-ETVYRVSKHYTRMNQHVPILYVQLYTYQICRALNYLHH-------VVGVCHRDIKPQ 268 (492)
Q Consensus 197 ~~~~~~~~~~~~~~~lV~E~~~-~~l~~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~yLH~-------~~givHrDlKp~ 268 (492)
+.=.... ..-..++||.+|.+ |+|++.+.. ..++......++..++.||++||- ...|.|||||..
T Consensus 272 aaD~~~~-gs~TQLwLvTdYHe~GSL~DyL~r-----~tv~~~~ml~LalS~AsGLaHLH~eI~GTqgKPaIAHRDlKSK 345 (513)
T KOG2052|consen 272 AADNKDN-GSWTQLWLVTDYHEHGSLYDYLNR-----NTVTTEGMLKLALSIASGLAHLHMEIVGTQGKPAIAHRDLKSK 345 (513)
T ss_pred hccccCC-CceEEEEEeeecccCCcHHHHHhh-----ccCCHHHHHHHHHHHhhhHHHHHHHHhcCCCCchhhccccccc
Confidence 7532222 23346899999998 566665543 567888889999999999999992 135999999999
Q ss_pred ceEEcCCCCcEEEeeecCccccCCCC-----CCccceeccCccCchhhcCCCCC-----CcchhhHHHHHHHHHHHh---
Q 011138 269 NLLVNPHTHQLKICDFGSAKMLVPGE-----PNISYICSRYYRAPELIFGATEY-----TTAIDMWSIGCVLAELLL--- 335 (492)
Q Consensus 269 NILl~~~~~~vkL~DFG~a~~~~~~~-----~~~~~~gt~~y~aPE~~~~~~~~-----~~~~DvwSlGvil~ell~--- 335 (492)
||||.+++ .+.|+|+|+|....... .....+||..|||||++...-.. -..+||||||.|+||+..
T Consensus 346 NILVKkn~-~C~IADLGLAv~h~~~t~~idi~~N~rVGTKRYMAPEvLdetin~~~Fesyk~ADIYafgLVlWEiarRc~ 424 (513)
T KOG2052|consen 346 NILVKKNG-TCCIADLGLAVRHDSDTDTIDIPPNPRVGTKRYMAPEVLDETINMKHFESYKRADIYAFGLVLWEIARRCE 424 (513)
T ss_pred cEEEccCC-cEEEeeceeeEEecccCCcccCCCCCccceeeccChHHhhhhcChhhhhhhhHHHHHHHHHHHHHHHHHhh
Confidence 99999998 89999999997765442 33467999999999999543221 136899999999999984
Q ss_pred --C-----CCCCCCCChHHHHHHHHHHhCCCCHHHHhhcCCCCcccCCCcccCCCcccccCCCCChhHhhhhccccccCC
Q 011138 336 --G-----QPLFPGESGVDQLVEIIKILGTPTREEIKCMNPNYTEFKFPQIKAHPWHKIFHKRMPPEALDLVSRLLQYSP 408 (492)
Q Consensus 336 --G-----~~pf~~~~~~~~~~~i~~~~g~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~Li~~~L~~dP 408 (492)
| ++||.+--+. .|..+++ ..-...-++.......|... ..-..+-.|++.||..||
T Consensus 425 ~ggi~eey~~Pyyd~Vp~-----------DPs~eeM---rkVVCv~~~RP~ipnrW~s~---~~l~~m~klMkeCW~~Np 487 (513)
T KOG2052|consen 425 SGGIVEEYQLPYYDVVPS-----------DPSFEEM---RKVVCVQKLRPNIPNRWKSD---PALRVMAKLMKECWYANP 487 (513)
T ss_pred cCCEehhhcCCcccCCCC-----------CCCHHHH---hcceeecccCCCCCcccccC---HHHHHHHHHHHHhhcCCc
Confidence 2 4777542211 1111111 11111112222222334221 122345688999999999
Q ss_pred CCcCCHHHhhC
Q 011138 409 SLRCTALEACA 419 (492)
Q Consensus 409 ~~R~t~~e~l~ 419 (492)
.-|.|+..+..
T Consensus 488 ~aRltALriKK 498 (513)
T KOG2052|consen 488 AARLTALRIKK 498 (513)
T ss_pred hhhhHHHHHHH
Confidence 99999877643
No 396
>KOG0576 consensus Mitogen-activated protein kinase kinase kinase kinase (MAP4K), germinal center kinase family [Signal transduction mechanisms]
Probab=100.00 E-value=4.3e-34 Score=288.29 Aligned_cols=255 Identities=26% Similarity=0.386 Sum_probs=205.5
Q ss_pred cceeEeeeeccCCceEEEEEEEcCCCCEEEEEEeccc----hhhHHHHHHHHHHcCCCCccccceeeeeccCCCceEEEE
Q 011138 137 ISYMAERVVGTGSFGVVFQAKCLETGDSVAIKKVLQD----KRYKNRELQIMRLLNHPNVVSLKHCFFSTTEKDELYLNL 212 (492)
Q Consensus 137 ~~y~~~~~lG~G~fg~Vy~~~~~~~g~~vAiK~~~~~----~~~~~~E~~il~~l~h~nIv~l~~~~~~~~~~~~~~~~l 212 (492)
.+|.+...+|.|.||.||+++++.+++..|+|+++-. ....++|+-+++.++|||||.+++.|...+ .+++
T Consensus 15 ddyellqrvgsgTygdvyKaRd~~s~elaavkvVkLep~dd~~~iqqei~~~~dc~h~nivay~gsylr~d-----klwi 89 (829)
T KOG0576|consen 15 DDYELLQRVGSGTYGDVYKARDKRSGELAAVKVVKLEPGDDFSGIQQEIGMLRDCRHPNIVAYFGSYLRRD-----KLWI 89 (829)
T ss_pred cchhheeeecCCcccchhhhcccccCchhhheeeeccCCccccccccceeeeecCCCcChHHHHhhhhhhc-----CcEE
Confidence 4699999999999999999999999999999998543 345568999999999999999999985433 4899
Q ss_pred EeeechhhHHHHhhhhhhcCCCcCHHHHHHHHHHHHHHHHHHHhhCCcccCCCCCCceEEcCCCCcEEEeeecCccccCC
Q 011138 213 VLEYISETVYRVSKHYTRMNQHVPILYVQLYTYQICRALNYLHHVVGVCHRDIKPQNLLVNPHTHQLKICDFGSAKMLVP 292 (492)
Q Consensus 213 V~E~~~~~l~~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~yLH~~~givHrDlKp~NILl~~~~~~vkL~DFG~a~~~~~ 292 (492)
.||||+|+.++.+.+ ....+++.++..+.+..+.||+|||+ +|=+|||||-.|||++..+ .+|++|||.+..+..
T Consensus 90 cMEycgggslQdiy~---~TgplselqiayvcRetl~gl~ylhs-~gk~hRdiKGanilltd~g-DvklaDfgvsaqita 164 (829)
T KOG0576|consen 90 CMEYCGGGSLQDIYH---VTGPLSELQIAYVCRETLQGLKYLHS-QGKIHRDIKGANILLTDEG-DVKLADFGVSAQITA 164 (829)
T ss_pred EEEecCCCcccceee---ecccchhHHHHHHHhhhhccchhhhc-CCcccccccccceeecccC-ceeecccCchhhhhh
Confidence 999999887665443 35678899999999999999999997 8999999999999999888 799999998755422
Q ss_pred -CCCCccceeccCccCchhh--cCCCCCCcchhhHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCCHHHHhhcCC
Q 011138 293 -GEPNISYICSRYYRAPELI--FGATEYTTAIDMWSIGCVLAELLLGQPLFPGESGVDQLVEIIKILGTPTREEIKCMNP 369 (492)
Q Consensus 293 -~~~~~~~~gt~~y~aPE~~--~~~~~~~~~~DvwSlGvil~ell~G~~pf~~~~~~~~~~~i~~~~g~p~~~~~~~~~~ 369 (492)
-....+++||++|||||+- .....|...+|||++|+...|+---++|-........+..+-+.
T Consensus 165 ti~KrksfiGtpywmapEvaaverkggynqlcdiwa~gitAiel~eLqpplfdlhpmr~l~LmTkS-------------- 230 (829)
T KOG0576|consen 165 TIAKRKSFIGTPYWMAPEVAAVERKGGYNQLCDIWALGITAIELGELQPPLFDLHPMRALFLMTKS-------------- 230 (829)
T ss_pred hhhhhhcccCCccccchhHHHHHhcccccccccccccccchhhhhhcCCcccccchHHHHHHhhcc--------------
Confidence 2345678999999999986 23456999999999999999999888886555444444433331
Q ss_pred CCcccCCCcccCCCcccccCCCCChhHhhhhccccccCCCCcCCHHHhhCCCCCCC
Q 011138 370 NYTEFKFPQIKAHPWHKIFHKRMPPEALDLVSRLLQYSPSLRCTALEACAHPFFDD 425 (492)
Q Consensus 370 ~~~~~~~~~~~~~~~~~~~~~~~s~~~~~Li~~~L~~dP~~R~t~~e~l~Hp~f~~ 425 (492)
.++-|..+.. ..-++.+-+|++.+|.++|.+||+++.+|+|||...
T Consensus 231 ---~~qpp~lkDk-------~kws~~fh~fvK~altknpKkRptaeklL~h~fvs~ 276 (829)
T KOG0576|consen 231 ---GFQPPTLKDK-------TKWSEFFHNFVKGALTKNPKKRPTAEKLLQHPFVSQ 276 (829)
T ss_pred ---CCCCCcccCC-------ccchHHHHHHHHHHhcCCCccCCChhhheeceeecc
Confidence 1111221111 123677889999999999999999999999999874
No 397
>KOG3653 consensus Transforming growth factor beta/activin receptor subfamily of serine/threonine kinases [Signal transduction mechanisms]
Probab=99.98 E-value=1.5e-32 Score=267.98 Aligned_cols=268 Identities=25% Similarity=0.312 Sum_probs=188.3
Q ss_pred eeEeeeeccCCceEEEEEEEcCCCCEEEEEEecc-chhhHHHHHHHHHH--cCCCCccccceeeeeccCCCceEEEEEee
Q 011138 139 YMAERVVGTGSFGVVFQAKCLETGDSVAIKKVLQ-DKRYKNRELQIMRL--LNHPNVVSLKHCFFSTTEKDELYLNLVLE 215 (492)
Q Consensus 139 y~~~~~lG~G~fg~Vy~~~~~~~g~~vAiK~~~~-~~~~~~~E~~il~~--l~h~nIv~l~~~~~~~~~~~~~~~~lV~E 215 (492)
..+..+||+|.||.||+|.. +++.||||++.. ++....+|.+|.+. ++|+||+++++.=...+ .+..-++||++
T Consensus 212 l~l~eli~~Grfg~V~KaqL--~~~~VAVKifp~~~kqs~~~Ek~Iy~lp~m~h~nIl~Fi~~ekr~t-~~~~eywLVt~ 288 (534)
T KOG3653|consen 212 LQLLELIGRGRFGCVWKAQL--DNRLVAVKIFPEQEKQSFQNEKNIYSLPGMKHENILQFIGAEKRGT-ADRMEYWLVTE 288 (534)
T ss_pred hhhHHHhhcCccceeehhhc--cCceeEEEecCHHHHHHHHhHHHHHhccCccchhHHHhhchhccCC-ccccceeEEee
Confidence 55667899999999999976 569999999954 45667788888775 57999999877532222 23445789999
Q ss_pred ech-hhHHHHhhhhhhcCCCcCHHHHHHHHHHHHHHHHHHHhh--------CCcccCCCCCCceEEcCCCCcEEEeeecC
Q 011138 216 YIS-ETVYRVSKHYTRMNQHVPILYVQLYTYQICRALNYLHHV--------VGVCHRDIKPQNLLVNPHTHQLKICDFGS 286 (492)
Q Consensus 216 ~~~-~~l~~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~yLH~~--------~givHrDlKp~NILl~~~~~~vkL~DFG~ 286 (492)
|.+ |.|.++++. ..+++.....++..|++||+|||+. .+|+|||||..||||..|. +..|+|||+
T Consensus 289 fh~kGsL~dyL~~-----ntisw~~~cria~SmarGLa~LHee~p~~d~~Kp~IaHRDlkSkNVLvK~Dl-TccIaDFGL 362 (534)
T KOG3653|consen 289 FHPKGSLCDYLKA-----NTISWNSLCRIAESMARGLAHLHEELPRGDHHKPPIAHRDLKSKNVLVKNDL-TCCIADFGL 362 (534)
T ss_pred eccCCcHHHHHHh-----ccccHHHHHHHHHHHHHHHHHhcccCCcCCCCCCccccccccccceEEccCC-cEEeeccce
Confidence 998 556655543 5689999999999999999999941 3699999999999999888 899999999
Q ss_pred ccccCCCCC---CccceeccCccCchhhcCCCCCC-----cchhhHHHHHHHHHHHhCCCCCC-CCChHHHHHHHHHHhC
Q 011138 287 AKMLVPGEP---NISYICSRYYRAPELIFGATEYT-----TAIDMWSIGCVLAELLLGQPLFP-GESGVDQLVEIIKILG 357 (492)
Q Consensus 287 a~~~~~~~~---~~~~~gt~~y~aPE~~~~~~~~~-----~~~DvwSlGvil~ell~G~~pf~-~~~~~~~~~~i~~~~g 357 (492)
|.++.++.. ....+||..|||||++.|...+. .+.||||+|.|||||++...-+. +.-+.-++.=-.++-.
T Consensus 363 Al~~~p~~~~~d~~~qVGT~RYMAPEvLEgainl~d~~Afkr~DvYamgLVLWEi~SRC~~~~~~~vp~Yqlpfe~evG~ 442 (534)
T KOG3653|consen 363 ALRLEPGKPQGDTHGQVGTRRYMAPEVLEGAINLQDRDAFKRIDVYAMGLVLWEIASRCTDADPGPVPEYQLPFEAEVGN 442 (534)
T ss_pred eEEecCCCCCcchhhhhhhhhhcCHHHHhhhcccccHHHHHHHHHHHHHHHHHHHHhhcccccCCCCCcccCchhHHhcC
Confidence 988865543 33579999999999998766555 46899999999999998654442 1111111100011112
Q ss_pred CCCHHHHhhcC-CCCcccCCCcccCCCcccccCCCCChhHhhhhccccccCCCCcCCHH------HhhCCCC
Q 011138 358 TPTREEIKCMN-PNYTEFKFPQIKAHPWHKIFHKRMPPEALDLVSRLLQYSPSLRCTAL------EACAHPF 422 (492)
Q Consensus 358 ~p~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~Li~~~L~~dP~~R~t~~------e~l~Hp~ 422 (492)
.|..+++...- ....+-.+|. .|... ....-+++.+..||..||+.|+|+. ..+.|.|
T Consensus 443 hPt~e~mq~~VV~kK~RP~~p~----~W~~h---~~~~~l~et~EeCWDhDaeARLTA~Cv~eR~~~l~~~~ 507 (534)
T KOG3653|consen 443 HPTLEEMQELVVRKKQRPKIPD----AWRKH---AGMAVLCETIEECWDHDAEARLTAGCVEERMAELMMLW 507 (534)
T ss_pred CCCHHHHHHHHHhhccCCCChh----hhhcC---ccHHHHHHHHHHHcCCchhhhhhhHHHHHHHHHHhccC
Confidence 34444333211 0001111111 12221 2345688999999999999999986 3455665
No 398
>KOG0200 consensus Fibroblast/platelet-derived growth factor receptor and related receptor tyrosine kinases [Signal transduction mechanisms]
Probab=99.97 E-value=1.5e-30 Score=278.80 Aligned_cols=246 Identities=26% Similarity=0.397 Sum_probs=187.7
Q ss_pred eeEeeeeccCCceEEEEEEEcC-------CCCEEEEEEeccc-----hhhHHHHHHHHHHcC-CCCccccceeeeeccCC
Q 011138 139 YMAERVVGTGSFGVVFQAKCLE-------TGDSVAIKKVLQD-----KRYKNRELQIMRLLN-HPNVVSLKHCFFSTTEK 205 (492)
Q Consensus 139 y~~~~~lG~G~fg~Vy~~~~~~-------~g~~vAiK~~~~~-----~~~~~~E~~il~~l~-h~nIv~l~~~~~~~~~~ 205 (492)
..+.+.||+|.||.|++|.... ....||||..... ...+..|+++|+.+. |+||+.+++++..
T Consensus 298 l~~~~~lg~g~fG~v~~~~~~~~~~~~~~~~~~VaVK~~k~~~~~~~~~~~~~El~~m~~~g~H~niv~llG~~t~---- 373 (609)
T KOG0200|consen 298 LKLGKYLGEGAFGQVVKALLFGLSKALLSIYVTVAVKMLKENASSSEKKDLMSELNVLKELGKHPNIVNLLGACTQ---- 373 (609)
T ss_pred ccccceeecccccceEeEEEeecccccccceEEEEEEecccccCcHHHHHHHHHHHHHHHhcCCcchhhheeeecc----
Confidence 3566689999999999997431 1456999987533 344567999999986 9999999998843
Q ss_pred CceEEEEEeeech-hhHHHHhhhhh---h-------cC--CCcCHHHHHHHHHHHHHHHHHHHhhCCcccCCCCCCceEE
Q 011138 206 DELYLNLVLEYIS-ETVYRVSKHYT---R-------MN--QHVPILYVQLYTYQICRALNYLHHVVGVCHRDIKPQNLLV 272 (492)
Q Consensus 206 ~~~~~~lV~E~~~-~~l~~~~~~~~---~-------~~--~~~~~~~~~~i~~qi~~aL~yLH~~~givHrDlKp~NILl 272 (492)
...+++|+||+. |+++.++.+.+ . .. ..++......+++||+.|++||++ +++|||||-..|||+
T Consensus 374 -~~~~~~v~Ey~~~G~L~~~Lr~~r~~~~~~~~~~~~~~~~~L~~~dLlsfa~QIa~GMe~L~~-~~~vHRDLAaRNVLi 451 (609)
T KOG0200|consen 374 -DGPLYVIVEYAEHGDLLEFLRKKRVTESIDGSGVFPNERDALTTKDLLSFAYQIANGMEYLAS-VPCVHRDLAARNVLI 451 (609)
T ss_pred -CCceEEEEEeccCCcHHHHHHhccccccccccCCCccccCCcCHHHHHHHHHHHHHHHHHHhh-CCccchhhhhhhEEe
Confidence 456889999998 56666655443 0 01 138888899999999999999997 899999999999999
Q ss_pred cCCCCcEEEeeecCccccCCCCCCc--ccee--ccCccCchhhcCCCCCCcchhhHHHHHHHHHHHh-CCCCCCCCChHH
Q 011138 273 NPHTHQLKICDFGSAKMLVPGEPNI--SYIC--SRYYRAPELIFGATEYTTAIDMWSIGCVLAELLL-GQPLFPGESGVD 347 (492)
Q Consensus 273 ~~~~~~vkL~DFG~a~~~~~~~~~~--~~~g--t~~y~aPE~~~~~~~~~~~~DvwSlGvil~ell~-G~~pf~~~~~~~ 347 (492)
..+. .+||+|||+|+......... ...| ...|||||.+.. ..|+.++|||||||+|||+++ |..||.+.....
T Consensus 452 ~~~~-~~kIaDFGlar~~~~~~~y~~~~~~~~LP~kWmApEsl~~-~~ft~kSDVWSfGI~L~EifsLG~~PYp~~~~~~ 529 (609)
T KOG0200|consen 452 TKNK-VIKIADFGLARDHYNKDYYRTKSSAGTLPVKWMAPESLFD-RVFTSKSDVWSFGILLWEIFTLGGTPYPGIPPTE 529 (609)
T ss_pred cCCC-EEEEccccceeccCCCCceEecCCCCccceeecCHHHhcc-CcccccchhhHHHHHHHHHhhCCCCCCCCCCcHH
Confidence 9886 89999999998654433222 1122 234999999976 569999999999999999997 999999855333
Q ss_pred HHHHHHHHhCCCCHHHHhhcCCCCcccCCCcccCCCcccccCCCCChhHhhhhccccccCCCCcCCHHHhhC
Q 011138 348 QLVEIIKILGTPTREEIKCMNPNYTEFKFPQIKAHPWHKIFHKRMPPEALDLVSRLLQYSPSLRCTALEACA 419 (492)
Q Consensus 348 ~~~~i~~~~g~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~Li~~~L~~dP~~R~t~~e~l~ 419 (492)
.+.+.++.. .... .+...++++.++++.||..+|++||+..++..
T Consensus 530 ~l~~~l~~G---------------~r~~------------~P~~c~~eiY~iM~~CW~~~p~~RP~F~~~~~ 574 (609)
T KOG0200|consen 530 ELLEFLKEG---------------NRME------------QPEHCSDEIYDLMKSCWNADPEDRPTFSECVE 574 (609)
T ss_pred HHHHHHhcC---------------CCCC------------CCCCCCHHHHHHHHHHhCCCcccCCCHHHHHH
Confidence 333322210 0111 22457899999999999999999999998775
No 399
>KOG1025 consensus Epidermal growth factor receptor EGFR and related tyrosine kinases [Signal transduction mechanisms]
Probab=99.97 E-value=5.4e-31 Score=270.82 Aligned_cols=241 Identities=25% Similarity=0.377 Sum_probs=189.5
Q ss_pred eeEeeeeccCCceEEEEEEEcCCCC----EEEEEEeccc-----hhhHHHHHHHHHHcCCCCccccceeeeeccCCCceE
Q 011138 139 YMAERVVGTGSFGVVFQAKCLETGD----SVAIKKVLQD-----KRYKNRELQIMRLLNHPNVVSLKHCFFSTTEKDELY 209 (492)
Q Consensus 139 y~~~~~lG~G~fg~Vy~~~~~~~g~----~vAiK~~~~~-----~~~~~~E~~il~~l~h~nIv~l~~~~~~~~~~~~~~ 209 (492)
.+..++||+|+||+||+|.+...|+ +||||++... ...+.+|+-+|..|+|||+++|++++....
T Consensus 698 lkk~kvLGsgAfGtV~kGiw~Pege~vKipVaiKvl~~~t~~~~s~e~LdeAl~masldHpnl~RLLgvc~~s~------ 771 (1177)
T KOG1025|consen 698 LKKDKVLGSGAFGTVYKGIWIPEGENVKIPVAIKVLIEFTSPKASIELLDEALRMASLDHPNLLRLLGVCMLST------ 771 (1177)
T ss_pred hhhhceeccccceeEEeeeEecCCceecceeEEEEeeccCCchhhHHHHHHHHHHhcCCCchHHHHhhhcccch------
Confidence 4455789999999999999877665 4788877432 334557999999999999999999985433
Q ss_pred EEEEeeechhh-HHHHhhhhhhcCCCcCHHHHHHHHHHHHHHHHHHHhhCCcccCCCCCCceEEcCCCCcEEEeeecCcc
Q 011138 210 LNLVLEYISET-VYRVSKHYTRMNQHVPILYVQLYTYQICRALNYLHHVVGVCHRDIKPQNLLVNPHTHQLKICDFGSAK 288 (492)
Q Consensus 210 ~~lV~E~~~~~-l~~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~yLH~~~givHrDlKp~NILl~~~~~~vkL~DFG~a~ 288 (492)
+-||++|++.+ |++.++ .....+.......|..||++||.|||. +.+|||||-..||||.+-. .+||+|||+|+
T Consensus 772 ~qlvtq~mP~G~LlDyvr---~hr~~igsq~lLnw~~QIAkgM~YLe~-qrlVHrdLaaRNVLVksP~-hvkitdfgla~ 846 (1177)
T KOG1025|consen 772 LQLVTQLMPLGCLLDYVR---EHRDNIGSQDLLNWCYQIAKGMKYLEE-QRLVHRDLAARNVLVKSPN-HVKITDFGLAK 846 (1177)
T ss_pred HHHHHHhcccchHHHHHH---HhhccccHHHHHHHHHHHHHHHHHHHh-cchhhhhhhhhheeecCCC-eEEEEecchhh
Confidence 56899999954 554433 344668888899999999999999997 9999999999999999877 69999999999
Q ss_pred ccCCCCCCcccee---ccCccCchhhcCCCCCCcchhhHHHHHHHHHHHh-CCCCCCCCChHHHHHHHHHHhCCCCHHHH
Q 011138 289 MLVPGEPNISYIC---SRYYRAPELIFGATEYTTAIDMWSIGCVLAELLL-GQPLFPGESGVDQLVEIIKILGTPTREEI 364 (492)
Q Consensus 289 ~~~~~~~~~~~~g---t~~y~aPE~~~~~~~~~~~~DvwSlGvil~ell~-G~~pf~~~~~~~~~~~i~~~~g~p~~~~~ 364 (492)
.+..+.......| .+-|||-|.+.. ..|+.++|||||||++||++| |..||.+....+.- ++++ .+
T Consensus 847 ll~~d~~ey~~~~gK~pikwmale~i~~-~~~thqSDVWsfGVtiWElmTFGa~Py~gi~~~eI~-dlle---~g----- 916 (1177)
T KOG1025|consen 847 LLAPDEKEYSAPGGKVPIKWMALESIRI-RKYTHQSDVWSFGVTIWELMTFGAKPYDGIPAEEIP-DLLE---KG----- 916 (1177)
T ss_pred ccCcccccccccccccCcHHHHHHHhhc-cCCCchhhhhhhhhhHHHHHhcCCCccCCCCHHHhh-HHHh---cc-----
Confidence 8877665544333 456999998854 459999999999999999997 99999987754332 2222 10
Q ss_pred hhcCCCCcccCCCcccCCCcccccCCCCChhHhhhhccccccCCCCcCCHHHhhC
Q 011138 365 KCMNPNYTEFKFPQIKAHPWHKIFHKRMPPEALDLVSRLLQYSPSLRCTALEACA 419 (492)
Q Consensus 365 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~Li~~~L~~dP~~R~t~~e~l~ 419 (492)
. +++ .++..+-++.-++.+||..|+..||++.++..
T Consensus 917 -------e--RLs----------qPpiCtiDVy~~mvkCwmid~~~rp~fkel~~ 952 (1177)
T KOG1025|consen 917 -------E--RLS----------QPPICTIDVYMVMVKCWMIDADSRPTFKELAE 952 (1177)
T ss_pred -------c--cCC----------CCCCccHHHHHHHHHHhccCcccCccHHHHHH
Confidence 1 111 23457889999999999999999999887653
No 400
>cd00180 PKc Catalytic domain of Protein Kinases. Protein Kinases (PKs), catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The PK family is part of a larger superfamily that includes the catalytic domains of RIO kinases, aminoglycoside phosphotransferase, choline kinase, phosphoinositide 3-kinase (PI3K), and actin-fragmin kinase. PKs make up a large family of serine/threonine kinases, protein tyrosine kinases (PTKs), and dual-specificity PKs that phosphorylate both serine/threonine and tyrosine residues of target proteins. Majority of protein phosphorylation, about 95%, occurs on serine residues while only 1% occurs on tyrosine residues. Protein phosphorylation is a mechanism by which a wide variety of cellular proteins, such as enzymes and membrane channels, are reversibly regulated in response to certain stimuli. PKs often function as components of signal transduction pathways in which
Probab=99.97 E-value=3.8e-29 Score=231.20 Aligned_cols=207 Identities=36% Similarity=0.593 Sum_probs=173.0
Q ss_pred eccCCceEEEEEEEcCCCCEEEEEEeccch-----hhHHHHHHHHHHcCCCCccccceeeeeccCCCceEEEEEeeechh
Q 011138 145 VGTGSFGVVFQAKCLETGDSVAIKKVLQDK-----RYKNRELQIMRLLNHPNVVSLKHCFFSTTEKDELYLNLVLEYISE 219 (492)
Q Consensus 145 lG~G~fg~Vy~~~~~~~g~~vAiK~~~~~~-----~~~~~E~~il~~l~h~nIv~l~~~~~~~~~~~~~~~~lV~E~~~~ 219 (492)
||+|++|.||++.+..+|+.+++|++.... ....+|+.+++.+.|++|+++++++. .....+++||++.+
T Consensus 1 l~~g~~~~v~~~~~~~~~~~~~~K~~~~~~~~~~~~~~~~e~~~~~~l~~~~i~~~~~~~~-----~~~~~~~~~e~~~~ 75 (215)
T cd00180 1 LGEGGFGTVYLARDKKTGKKVAIKIIKKEDSSSLLEELLREIEILKKLNHPNIVKLYGVFE-----DENHLYLVMEYCEG 75 (215)
T ss_pred CCcCCceEEEEEEecCCCcEEEEEEeccccchhHHHHHHHHHHHHHhcCCCCeeeEeeeee-----cCCeEEEEEecCCC
Confidence 689999999999998889999999986654 35678999999999999999999883 33568899999994
Q ss_pred -hHHHHhhhhhhcCCCcCHHHHHHHHHHHHHHHHHHHhhCCcccCCCCCCceEEcC-CCCcEEEeeecCccccCCCC-CC
Q 011138 220 -TVYRVSKHYTRMNQHVPILYVQLYTYQICRALNYLHHVVGVCHRDIKPQNLLVNP-HTHQLKICDFGSAKMLVPGE-PN 296 (492)
Q Consensus 220 -~l~~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~yLH~~~givHrDlKp~NILl~~-~~~~vkL~DFG~a~~~~~~~-~~ 296 (492)
.+...+... ...++...+..++.+++.+|.|||+ .|++|+||+|.||+++. ++ .++|+|||.+....... ..
T Consensus 76 ~~l~~~~~~~---~~~~~~~~~~~~~~~l~~~l~~lh~-~~~~H~dl~~~ni~~~~~~~-~~~l~d~~~~~~~~~~~~~~ 150 (215)
T cd00180 76 GSLKDLLKEN---EGKLSEDEILRILLQILEGLEYLHS-NGIIHRDLKPENILLDSDNG-KVKLADFGLSKLLTSDKSLL 150 (215)
T ss_pred CcHHHHHHhc---cCCCCHHHHHHHHHHHHHHHHHHHh-CCeeccCCCHhhEEEeCCCC-cEEEecCCceEEccCCcchh
Confidence 554443321 1467888999999999999999997 89999999999999998 55 79999999997654332 13
Q ss_pred ccceeccCccCchhhcCCCCCCcchhhHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCCHHHHhhcCCCCcccCC
Q 011138 297 ISYICSRYYRAPELIFGATEYTTAIDMWSIGCVLAELLLGQPLFPGESGVDQLVEIIKILGTPTREEIKCMNPNYTEFKF 376 (492)
Q Consensus 297 ~~~~gt~~y~aPE~~~~~~~~~~~~DvwSlGvil~ell~G~~pf~~~~~~~~~~~i~~~~g~p~~~~~~~~~~~~~~~~~ 376 (492)
....+...|++||.+.....++.+.|+|++|+++|+|
T Consensus 151 ~~~~~~~~~~~pe~~~~~~~~~~~~D~~~lg~~~~~l------------------------------------------- 187 (215)
T cd00180 151 KTIVGTPAYMAPEVLLGKGYYSEKSDIWSLGVILYEL------------------------------------------- 187 (215)
T ss_pred hcccCCCCccChhHhcccCCCCchhhhHHHHHHHHHH-------------------------------------------
Confidence 3456788899999986543588999999999999999
Q ss_pred CcccCCCcccccCCCCChhHhhhhccccccCCCCcCCHHHhhCCC
Q 011138 377 PQIKAHPWHKIFHKRMPPEALDLVSRLLQYSPSLRCTALEACAHP 421 (492)
Q Consensus 377 ~~~~~~~~~~~~~~~~s~~~~~Li~~~L~~dP~~R~t~~e~l~Hp 421 (492)
..+.+++.+||..||.+||++.++++|+
T Consensus 188 -----------------~~~~~~l~~~l~~~p~~R~~~~~l~~~~ 215 (215)
T cd00180 188 -----------------PELKDLIRKMLQKDPEKRPSAKEILEHL 215 (215)
T ss_pred -----------------HHHHHHHHHHhhCCcccCcCHHHHhhCC
Confidence 1267999999999999999999999875
No 401
>PLN00181 protein SPA1-RELATED; Provisional
Probab=99.97 E-value=7.6e-31 Score=291.49 Aligned_cols=207 Identities=19% Similarity=0.194 Sum_probs=147.0
Q ss_pred HcCC-CCccccceeeeeccC--CCceEEEEEeeechhhHHHHhhhhhhcCCCcCHHHHHHHHHHHHHHHHHHHhhCCccc
Q 011138 186 LLNH-PNVVSLKHCFFSTTE--KDELYLNLVLEYISETVYRVSKHYTRMNQHVPILYVQLYTYQICRALNYLHHVVGVCH 262 (492)
Q Consensus 186 ~l~h-~nIv~l~~~~~~~~~--~~~~~~~lV~E~~~~~l~~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~yLH~~~givH 262 (492)
.++| +||+++++.|..... .....++++|||++++|..++.. ....+++..++.|++||+.||.|||+ +||||
T Consensus 28 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~L~~~l~~---~~~~~~~~~~~~i~~qi~~al~~lH~-~gIvH 103 (793)
T PLN00181 28 SLSHIDYVRSLLGSHKEGNLDGLDDDSIVRALECEDVSLRQWLDN---PDRSVDAFECFHVFRQIVEIVNAAHS-QGIVV 103 (793)
T ss_pred hhhHHHHHHHhhcccCCccccccccchhhhhhccCCccHHHHHhc---ccccccHHHHHHHHHHHHHHHHHHHh-CCeee
Confidence 4455 588888887633221 12234678899998888776542 23568999999999999999999997 99999
Q ss_pred CCCCCCceEEcCCC------------------CcEEEeeecCccccCCC-----------------CCCccceeccCccC
Q 011138 263 RDIKPQNLLVNPHT------------------HQLKICDFGSAKMLVPG-----------------EPNISYICSRYYRA 307 (492)
Q Consensus 263 rDlKp~NILl~~~~------------------~~vkL~DFG~a~~~~~~-----------------~~~~~~~gt~~y~a 307 (492)
|||||+||||+..+ ..+||+|||+++..... ......+||++|||
T Consensus 104 rDlKP~NiLl~~~~~~k~~d~~~~~~~~~~~~~~~ki~DfG~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~A 183 (793)
T PLN00181 104 HNVRPSCFVMSSFNHVSFIESASCSDSGSDEDATTKSREIGSSRREEILSERRIEKLEEVKKQPFPMKQILAMEMSWYTS 183 (793)
T ss_pred ccCCchhEEEcccCcEEEeeccccCcccccccCcccccccccccccccccccchhhhhccccCCCcccccccCCCcceEC
Confidence 99999999995422 25677777776532110 00112468999999
Q ss_pred chhhcCCCCCCcchhhHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCCHHHHhhcCCCCcccCCCcccCCCcccc
Q 011138 308 PELIFGATEYTTAIDMWSIGCVLAELLLGQPLFPGESGVDQLVEIIKILGTPTREEIKCMNPNYTEFKFPQIKAHPWHKI 387 (492)
Q Consensus 308 PE~~~~~~~~~~~~DvwSlGvil~ell~G~~pf~~~~~~~~~~~i~~~~g~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 387 (492)
||++.+.. |+.++|||||||+||||++|.+||.... ..+..+.... .|+.
T Consensus 184 PE~~~~~~-~~~~sDVwSlGviL~ELl~~~~~~~~~~--~~~~~~~~~~-~~~~-------------------------- 233 (793)
T PLN00181 184 PEEDNGSS-SNCASDVYRLGVLLFELFCPVSSREEKS--RTMSSLRHRV-LPPQ-------------------------- 233 (793)
T ss_pred hhhhccCC-CCchhhhhhHHHHHHHHhhCCCchhhHH--HHHHHHHHhh-cChh--------------------------
Confidence 99997654 8999999999999999999998875322 1111111100 0000
Q ss_pred cCCCCChhHhhhhccccccCCCCcCCHHHhhCCCCCCCCC
Q 011138 388 FHKRMPPEALDLVSRLLQYSPSLRCTALEACAHPFFDDLR 427 (492)
Q Consensus 388 ~~~~~s~~~~~Li~~~L~~dP~~R~t~~e~l~Hp~f~~~~ 427 (492)
. ....+.+.+++.+||+.||.+||++.|+++||||...+
T Consensus 234 ~-~~~~~~~~~~~~~~L~~~P~~Rps~~eil~h~~~~~~~ 272 (793)
T PLN00181 234 I-LLNWPKEASFCLWLLHPEPSCRPSMSELLQSEFINEPR 272 (793)
T ss_pred h-hhcCHHHHHHHHHhCCCChhhCcChHHHhhchhhhhhh
Confidence 0 01134567899999999999999999999999998754
No 402
>KOG1345 consensus Serine/threonine kinase [Signal transduction mechanisms]
Probab=99.96 E-value=6.5e-31 Score=240.02 Aligned_cols=256 Identities=21% Similarity=0.283 Sum_probs=183.3
Q ss_pred cceeEeeeeccCCceEEEEEEEcCCCCEEEEEEeccch---hhHHHHHHHHHHc-CCCCccccceeeeeccCCCceEEEE
Q 011138 137 ISYMAERVVGTGSFGVVFQAKCLETGDSVAIKKVLQDK---RYKNRELQIMRLL-NHPNVVSLKHCFFSTTEKDELYLNL 212 (492)
Q Consensus 137 ~~y~~~~~lG~G~fg~Vy~~~~~~~g~~vAiK~~~~~~---~~~~~E~~il~~l-~h~nIv~l~~~~~~~~~~~~~~~~l 212 (492)
+.|.+.+.||+|.||.+-+|.++.+...+++|.+.... ..+.+|..---.| .|.||+.-|+.-+... .++++
T Consensus 24 d~y~I~k~lgeG~FgkIlL~eHr~s~t~ivlKavp~p~tt~~dF~rEfhY~~~Ls~H~hIi~tY~vaFqt~----d~YvF 99 (378)
T KOG1345|consen 24 DVYTINKQLGEGRFGKILLAEHRQSKTRIVLKAVPRPQTTQADFVREFHYSFFLSPHQHIIDTYEVAFQTS----DAYVF 99 (378)
T ss_pred hhhhHHHHhcccceeeEEeeeccCCceEEEeeccCcchhhHHHHHHHhccceeeccchhhhHHHHHHhhcC----ceEEE
Confidence 46999999999999999999999999999999886532 3444565543344 3899999888765433 26779
Q ss_pred EeeechhhHHHHhhhhhhcCCCcCHHHHHHHHHHHHHHHHHHHhhCCcccCCCCCCceEE-cCCCCcEEEeeecCccccC
Q 011138 213 VLEYISETVYRVSKHYTRMNQHVPILYVQLYTYQICRALNYLHHVVGVCHRDIKPQNLLV-NPHTHQLKICDFGSAKMLV 291 (492)
Q Consensus 213 V~E~~~~~l~~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~yLH~~~givHrDlKp~NILl-~~~~~~vkL~DFG~a~~~~ 291 (492)
++||++-+.+.. .. ....+.+...+.++.|+++||.|||+ +++||||||.+|||| +.+...|||||||+.+...
T Consensus 100 ~qE~aP~gdL~s--nv--~~~GigE~~~K~v~~ql~SAi~fMHs-knlVHRdlK~eNiLif~~df~rvKlcDFG~t~k~g 174 (378)
T KOG1345|consen 100 VQEFAPRGDLRS--NV--EAAGIGEANTKKVFAQLLSAIEFMHS-KNLVHRDLKAENILIFDADFYRVKLCDFGLTRKVG 174 (378)
T ss_pred eeccCccchhhh--hc--CcccccHHHHHHHHHHHHHHHHHhhc-cchhhcccccceEEEecCCccEEEeeecccccccC
Confidence 999999543321 11 12567888899999999999999997 999999999999998 5566689999999987542
Q ss_pred CCCCCccceeccCccCchhhcCC----CCCCcchhhHHHHHHHHHHHhCCCCCCCCChHH-HHHHHHHHhCCCCHHHHhh
Q 011138 292 PGEPNISYICSRYYRAPELIFGA----TEYTTAIDMWSIGCVLAELLLGQPLFPGESGVD-QLVEIIKILGTPTREEIKC 366 (492)
Q Consensus 292 ~~~~~~~~~gt~~y~aPE~~~~~----~~~~~~~DvwSlGvil~ell~G~~pf~~~~~~~-~~~~i~~~~g~p~~~~~~~ 366 (492)
..-...--+..|.+||++... -...+.+|+|.||+++|.+|||.+||+.....+ .+.+.++-++.-.
T Consensus 175 --~tV~~~~~~~~y~~pe~~~~~~ne~~~~~ps~D~WqfGIi~f~cltG~~PWQka~~~d~~Y~~~~~w~~rk~------ 246 (378)
T KOG1345|consen 175 --TTVKYLEYVNNYHAPELCDTVVNEKLVVNPSTDIWQFGIIFFYCLTGKFPWQKASIMDKPYWEWEQWLKRKN------ 246 (378)
T ss_pred --ceehhhhhhcccCCcHHHhhccccceEecccccchheeeeeeeeecCCCcchhhhccCchHHHHHHHhcccC------
Confidence 211122335669999987432 124667999999999999999999998543221 1222222111100
Q ss_pred cCCCCcccCCCcccCCCcccccCCCCChhHhhhhccccccCCCCc---CCHHHhhCCCCCCC
Q 011138 367 MNPNYTEFKFPQIKAHPWHKIFHKRMPPEALDLVSRLLQYSPSLR---CTALEACAHPFFDD 425 (492)
Q Consensus 367 ~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~Li~~~L~~dP~~R---~t~~e~l~Hp~f~~ 425 (492)
. ..|. ....+++.+..+.++-|..+|++| .++......-|...
T Consensus 247 ------~-~~P~---------~F~~fs~~a~r~Fkk~lt~~~~drcki~~~kk~rk~~w~E~ 292 (378)
T KOG1345|consen 247 ------P-ALPK---------KFNPFSEKALRLFKKSLTPRFKDRCKIWTAKKMRKCLWKEK 292 (378)
T ss_pred ------c-cCch---------hhcccCHHHHHHHHHhcCCcccccchhHHHHHHHHHHHHHh
Confidence 0 1111 113578999999999999999999 45555555566543
No 403
>smart00221 STYKc Protein kinase; unclassified specificity. Phosphotransferases. The specificity of this class of kinases can not be predicted. Possible dual-specificity Ser/Thr/Tyr kinase.
Probab=99.96 E-value=1e-28 Score=232.07 Aligned_cols=203 Identities=33% Similarity=0.575 Sum_probs=165.8
Q ss_pred eeEeeeeccCCceEEEEEEEcCCCCEEEEEEeccc-----hhhHHHHHHHHHHcCCCCccccceeeeeccCCCceEEEEE
Q 011138 139 YMAERVVGTGSFGVVFQAKCLETGDSVAIKKVLQD-----KRYKNRELQIMRLLNHPNVVSLKHCFFSTTEKDELYLNLV 213 (492)
Q Consensus 139 y~~~~~lG~G~fg~Vy~~~~~~~g~~vAiK~~~~~-----~~~~~~E~~il~~l~h~nIv~l~~~~~~~~~~~~~~~~lV 213 (492)
|.+.+.||.|++|.||++....+++.+|+|.+... .....+|++.++.++|+|++++++++. .....++|
T Consensus 1 ~~~~~~i~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~e~~~~~~~~~~~i~~~~~~~~-----~~~~~~~v 75 (225)
T smart00221 1 YELGKKLGEGAFGKVYLARDKGTGELVAVKVLKKEKTEKQREEFLREIRILKKLKHPNIVKLYGVFE-----DPEPLYLV 75 (225)
T ss_pred CceeeEeecCCCeEEEEEEEcCCCcEEEEEeeccccchHHHHHHHHHHHHHHhCCCCChhhheeeee-----cCCceEEE
Confidence 56778899999999999999888999999998653 345567999999999999999999873 33458899
Q ss_pred eeechh-hHHHHhhhhhhcCCCcCHHHHHHHHHHHHHHHHHHHhhCCcccCCCCCCceEEcCCCCcEEEeeecCccccCC
Q 011138 214 LEYISE-TVYRVSKHYTRMNQHVPILYVQLYTYQICRALNYLHHVVGVCHRDIKPQNLLVNPHTHQLKICDFGSAKMLVP 292 (492)
Q Consensus 214 ~E~~~~-~l~~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~yLH~~~givHrDlKp~NILl~~~~~~vkL~DFG~a~~~~~ 292 (492)
+|++.+ .+...+... ...+++..+..++.|++.+|.|||+ +|++|+||+|.||+++.++ .++|+|||.+.....
T Consensus 76 ~e~~~~~~L~~~~~~~---~~~~~~~~~~~~~~~l~~~l~~lh~-~~i~h~di~~~ni~v~~~~-~~~l~d~g~~~~~~~ 150 (225)
T smart00221 76 MEYCEGGDLFDYLRKK---GGKLSEEEARFYLRQILEALEYLHS-LGIVHRDLKPENILLGMDG-LVKLADFGLARFIHR 150 (225)
T ss_pred EeccCCCCHHHHHHhc---ccCCCHHHHHHHHHHHHHHHHHHHh-CCeecCCCCHHHEEEcCCC-CEEEeeCceeeEecC
Confidence 999997 555544321 1117888899999999999999997 8999999999999999876 899999999987654
Q ss_pred CC--CCccceeccCccCchhhcCCCCCCcchhhHHHHHHHHHHHhCCCCCCC-CChHHHHHH
Q 011138 293 GE--PNISYICSRYYRAPELIFGATEYTTAIDMWSIGCVLAELLLGQPLFPG-ESGVDQLVE 351 (492)
Q Consensus 293 ~~--~~~~~~gt~~y~aPE~~~~~~~~~~~~DvwSlGvil~ell~G~~pf~~-~~~~~~~~~ 351 (492)
.. ......++..|++||.+.+...++.++|+|+||+++|+|++|+.||.. .++...+.+
T Consensus 151 ~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~~Dv~~lG~~~~~l~~g~~pf~~~~~~~~~~~~ 212 (225)
T smart00221 151 DLAALLKTVKGTPFYLAPEVLLGGKGYGEAVDIWSLGVILYELLWGPEPFSGEGEFTSLLSD 212 (225)
T ss_pred cccccccceeccCCcCCHhHhcCCCCCCchhhHHHHHHHHHHHHHCCCCccccchhHHHHHH
Confidence 43 334567888999999984444578899999999999999999999977 455544444
No 404
>KOG0590 consensus Checkpoint kinase and related serine/threonine protein kinases [Cell cycle control, cell division, chromosome partitioning]
Probab=99.95 E-value=5.6e-29 Score=263.73 Aligned_cols=258 Identities=25% Similarity=0.352 Sum_probs=192.6
Q ss_pred eEeeeeccCCceEEEEEEEcCCCCEEEEEEec----cchhh------HHHHHHHHHHcCCCCccccceeeeeccCCCceE
Q 011138 140 MAERVVGTGSFGVVFQAKCLETGDSVAIKKVL----QDKRY------KNRELQIMRLLNHPNVVSLKHCFFSTTEKDELY 209 (492)
Q Consensus 140 ~~~~~lG~G~fg~Vy~~~~~~~g~~vAiK~~~----~~~~~------~~~E~~il~~l~h~nIv~l~~~~~~~~~~~~~~ 209 (492)
....++|.|++|.|+.+......+.++.|.+. ..... ...|..+-..|.|+|++..+..++....
T Consensus 321 ~~~~~~g~ga~g~~~~~~~~~~~~~~~~~~~r~~~~~~~s~~~~~~~i~sE~~i~~~l~h~~~~e~l~~~~~~~~----- 395 (601)
T KOG0590|consen 321 KPGRVLGSGAYGSVRIAKRRSDLKSFPEKEFRVRVKPTESERKYNYNITSEFCIGSSLSHPNIIETLDIVQEIDG----- 395 (601)
T ss_pred CccceeeecccCceEEEEecCCCccchhhhhhcccCCcccHHHHhhhhhhheeecccccCCchhhhHHHHhhccc-----
Confidence 45678999999999988887777777777543 11111 1246666677899999887776643322
Q ss_pred EEEEeeechhhHHHHhhhhhhcCCCcCHHHHHHHHHHHHHHHHHHHhhCCcccCCCCCCceEEcCCCCcEEEeeecCccc
Q 011138 210 LNLVLEYISETVYRVSKHYTRMNQHVPILYVQLYTYQICRALNYLHHVVGVCHRDIKPQNLLVNPHTHQLKICDFGSAKM 289 (492)
Q Consensus 210 ~~lV~E~~~~~l~~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~yLH~~~givHrDlKp~NILl~~~~~~vkL~DFG~a~~ 289 (492)
.+-+||||+++++.++.. ...+....+..++.|++.||+|||+ .||.||||||+|+++..++ .+||+|||.+..
T Consensus 396 ~~~~mE~~~~Dlf~~~~~----~~~~~~~e~~c~fKqL~~Gv~y~h~-~GiahrdlK~enll~~~~g-~lki~Dfg~~~v 469 (601)
T KOG0590|consen 396 ILQSMEYCPYDLFSLVMS----NGKLTPLEADCFFKQLLRGVKYLHS-MGLAHRDLKLENLLVTENG-ILKIIDFGAASV 469 (601)
T ss_pred chhhhhcccHHHHHHHhc----ccccchhhhhHHHHHHHHHHHHHHh-cCceeccCccccEEEecCC-ceEEeecCccee
Confidence 223499999977766554 2467778899999999999999997 8999999999999999988 899999999976
Q ss_pred cCCCCC-----CccceeccCccCchhhcCCCCCCcchhhHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCCHHHH
Q 011138 290 LVPGEP-----NISYICSRYYRAPELIFGATEYTTAIDMWSIGCVLAELLLGQPLFPGESGVDQLVEIIKILGTPTREEI 364 (492)
Q Consensus 290 ~~~~~~-----~~~~~gt~~y~aPE~~~~~~~~~~~~DvwSlGvil~ell~G~~pf~~~~~~~~~~~i~~~~g~p~~~~~ 364 (492)
...... ....+|+..|+|||++.+.......+||||.|++++.|++|+.||......+....-.
T Consensus 470 f~~~~e~~~~~~~g~~gS~pY~apE~~~~~~ydpr~vDiwS~~ii~~~m~~~~~~Wk~a~~~~~~~~~~----------- 538 (601)
T KOG0590|consen 470 FRYPWEKNIHESSGIVGSDPYLAPEVLTGKEYDPRAVDVWSCGIIYICMILGRFPWKVAKKSDNSFKTN----------- 538 (601)
T ss_pred eccCcchhhhhhcCcccCCcCcCcccccccccCcchhhhhhccceEEEEecCCCccccccccccchhhh-----------
Confidence 643322 3467899999999999888766778999999999999999999997655433321000
Q ss_pred hhcCCCCcccCCCcccCCCcccccCCCCChhHhhhhccccccCCCCcCCHHHhhCCCCCCCCCC
Q 011138 365 KCMNPNYTEFKFPQIKAHPWHKIFHKRMPPEALDLVSRLLQYSPSLRCTALEACAHPFFDDLRD 428 (492)
Q Consensus 365 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~Li~~~L~~dP~~R~t~~e~l~Hp~f~~~~~ 428 (492)
+.. ..... ...+ ..+...++...+.+|.+||+.||.+|+|+++|++.+||+.+..
T Consensus 539 ---~~~-~~~~~---~~~~--~~~~~~lp~~~~~~~~~~l~~~P~~R~ti~~i~~d~W~~~i~~ 593 (601)
T KOG0590|consen 539 ---NYS-DQRNI---FEGP--NRLLSLLPRETRIIIYRMLQLDPTKRITIEQILNDEWIRSIEC 593 (601)
T ss_pred ---ccc-ccccc---ccCh--HHHHHhchhhHHHHHHHHccCChhheecHHHHhhChHhhhcce
Confidence 000 00000 0000 1122457889999999999999999999999999999998753
No 405
>smart00750 KIND kinase non-catalytic C-lobe domain. It is an interaction domain identified as being similar to the C-terminal protein kinase catalytic fold (C lobe). Its presence at the N terminus of signalling proteins and the absence of the active-site residues in the catalytic and activation loops suggest that it folds independently and is likely to be non-catalytic. The occurrence of KIND only in metazoa implies that it has evolved from the catalytic protein kinase domain into an interaction domain possibly by keeping the substrate-binding features
Probab=99.94 E-value=2.3e-27 Score=215.29 Aligned_cols=157 Identities=24% Similarity=0.229 Sum_probs=119.4
Q ss_pred CCCcCHHHHHHHHHHHHHHHHHHHhhCCcccCCCCCCceEEcCCCCcEEEeeecCccccCCCCCCccceeccCccCchhh
Q 011138 232 NQHVPILYVQLYTYQICRALNYLHHVVGVCHRDIKPQNLLVNPHTHQLKICDFGSAKMLVPGEPNISYICSRYYRAPELI 311 (492)
Q Consensus 232 ~~~~~~~~~~~i~~qi~~aL~yLH~~~givHrDlKp~NILl~~~~~~vkL~DFG~a~~~~~~~~~~~~~gt~~y~aPE~~ 311 (492)
...+++..++.++.||+.||.|||+ ++ ||+|||++.++ .+|+ ||+++..... ...||+.|||||++
T Consensus 11 ~~~l~~~~~~~i~~qi~~~L~~lH~-~~------kp~Nil~~~~~-~~~~--fG~~~~~~~~----~~~g~~~y~aPE~~ 76 (176)
T smart00750 11 GRPLNEEEIWAVCLQCLRALRELHR-QA------KSGNILLTWDG-LLKL--DGSVAFKTPE----QSRVDPYFMAPEVI 76 (176)
T ss_pred CCCCCHHHHHHHHHHHHHHHHHHHh-cC------CcccEeEcCcc-ceee--ccceEeeccc----cCCCcccccChHHh
Confidence 4569999999999999999999997 77 99999999887 7888 9998765332 23689999999999
Q ss_pred cCCCCCCcchhhHHHHHHHHHHHhCCCCCCCCChHHH-HHHHHHHhCCCCHHHHhhcCCCCcccCCCcccCCCcccccCC
Q 011138 312 FGATEYTTAIDMWSIGCVLAELLLGQPLFPGESGVDQ-LVEIIKILGTPTREEIKCMNPNYTEFKFPQIKAHPWHKIFHK 390 (492)
Q Consensus 312 ~~~~~~~~~~DvwSlGvil~ell~G~~pf~~~~~~~~-~~~i~~~~g~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 390 (492)
.+. .|+.++|||||||++|||++|+.||........ +..+........ +. ......
T Consensus 77 ~~~-~~~~~~DiwSlG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~----------------~~------~~~~~~ 133 (176)
T smart00750 77 QGQ-SYTEKADIYSLGITLYEALDYELPYNEERELSAILEILLNGMPADD----------------PR------DRSNLE 133 (176)
T ss_pred cCC-CCcchhhHHHHHHHHHHHHhCCCCccccchhcHHHHHHHHHhccCC----------------cc------ccccHH
Confidence 765 489999999999999999999999976554332 222222110000 00 000001
Q ss_pred CCCh--hHhhhhccccccCCCCcCCHHHhhCCCCCCC
Q 011138 391 RMPP--EALDLVSRLLQYSPSLRCTALEACAHPFFDD 425 (492)
Q Consensus 391 ~~s~--~~~~Li~~~L~~dP~~R~t~~e~l~Hp~f~~ 425 (492)
.++. ++++||.+||..||.+||++.+++.|+|+..
T Consensus 134 ~~~~~~~~~~~i~~cl~~~p~~Rp~~~~ll~~~~~~~ 170 (176)
T smart00750 134 SVSAARSFADFMRVCASRLPQRREAANHYLAHCRALF 170 (176)
T ss_pred HHHhhhhHHHHHHHHHhcccccccCHHHHHHHHHHHH
Confidence 2233 6999999999999999999999999999763
No 406
>KOG1024 consensus Receptor-like protein tyrosine kinase RYK/derailed [Signal transduction mechanisms]
Probab=99.94 E-value=4.9e-27 Score=224.32 Aligned_cols=248 Identities=19% Similarity=0.263 Sum_probs=185.5
Q ss_pred cceeEeeeeccCCceEEEEEEEcCCC-----CEEEEEEeccchhhH-----HHHHHHHHHcCCCCccccceeeeeccCCC
Q 011138 137 ISYMAERVVGTGSFGVVFQAKCLETG-----DSVAIKKVLQDKRYK-----NRELQIMRLLNHPNVVSLKHCFFSTTEKD 206 (492)
Q Consensus 137 ~~y~~~~~lG~G~fg~Vy~~~~~~~g-----~~vAiK~~~~~~~~~-----~~E~~il~~l~h~nIv~l~~~~~~~~~~~ 206 (492)
.++++..++-+|.||.||.|.+.... +.|.+|.++...... ..|...+..+.|||++.+.++.....+
T Consensus 284 ~Rv~l~~llqEGtFGri~~gI~~eEdt~n~~q~v~vKTvk~~AS~iQv~~~L~es~lly~~sH~nll~V~~V~ie~~~-- 361 (563)
T KOG1024|consen 284 CRVRLSCLLQEGTFGRIYRGIWREEDTYNDCQEVLVKTVKQHASQIQVNLLLQESMLLYGASHPNLLSVLGVSIEDYA-- 361 (563)
T ss_pred hheechhhhhcCchhheeeeeecccCCcchHHHHHHHHHHhcccHHHHHHHHHHHHHHhcCcCCCccceeEEEeeccC--
Confidence 45777788999999999999776432 346667665544332 357778888899999999988754322
Q ss_pred ceEEEEEeeech-hhHHHHhhhh----hhcCCCcCHHHHHHHHHHHHHHHHHHHhhCCcccCCCCCCceEEcCCCCcEEE
Q 011138 207 ELYLNLVLEYIS-ETVYRVSKHY----TRMNQHVPILYVQLYTYQICRALNYLHHVVGVCHRDIKPQNLLVNPHTHQLKI 281 (492)
Q Consensus 207 ~~~~~lV~E~~~-~~l~~~~~~~----~~~~~~~~~~~~~~i~~qi~~aL~yLH~~~givHrDlKp~NILl~~~~~~vkL 281 (492)
.-+.++.+++ |.|..++... ....+.+.-.+...++.|++.|++|||+ +||||.||...|++|+..- +|||
T Consensus 362 --~P~V~y~~~~~gNLK~FL~~Cr~~~~~~aqtvtt~qlV~masQla~am~hlh~-~~ViHkDiAaRNCvIdd~L-qVkl 437 (563)
T KOG1024|consen 362 --TPFVLYPATGVGNLKSFLQICRGDDPSYAQTVTTIQLVLMASQLAMAMEHLHN-HGVIHKDIAARNCVIDDQL-QVKL 437 (563)
T ss_pred --cceEEEeccCcchHHHHHHHhccCCCccccchhHHHHHHHHHHHHHHHHHHHh-cCcccchhhhhcceehhhe-eEEe
Confidence 3446677776 4454444321 1223445666777899999999999997 9999999999999999765 8999
Q ss_pred eeecCccccCCCCCCc---cceeccCccCchhhcCCCCCCcchhhHHHHHHHHHHHh-CCCCCCCCChHHHHHHHHHHhC
Q 011138 282 CDFGSAKMLVPGEPNI---SYICSRYYRAPELIFGATEYTTAIDMWSIGCVLAELLL-GQPLFPGESGVDQLVEIIKILG 357 (492)
Q Consensus 282 ~DFG~a~~~~~~~~~~---~~~gt~~y~aPE~~~~~~~~~~~~DvwSlGvil~ell~-G~~pf~~~~~~~~~~~i~~~~g 357 (492)
+|=.+++.+.+.+..- ..-....||+||.+.. ..|+.++|+|||||+||||+| |+.||...++.+...-+.+.
T Consensus 438 tDsaLSRDLFP~DYhcLGDnEnRPvkWMslEal~n-~~yssasDvWsfGVllWELmtlg~~PyaeIDPfEm~~ylkdG-- 514 (563)
T KOG1024|consen 438 TDSALSRDLFPGDYHCLGDNENRPVKWMSLEALQN-SHYSSASDVWSFGVLLWELMTLGKLPYAEIDPFEMEHYLKDG-- 514 (563)
T ss_pred ccchhccccCcccccccCCCCCCcccccCHHHHhh-hhhcchhhhHHHHHHHHHHHhcCCCCccccCHHHHHHHHhcc--
Confidence 9999998876554321 1223567999999965 459999999999999999997 99999888876655544332
Q ss_pred CCCHHHHhhcCCCCcccCCCcccCCCcccccCCCCChhHhhhhccccccCCCCcCCHHHhhC
Q 011138 358 TPTREEIKCMNPNYTEFKFPQIKAHPWHKIFHKRMPPEALDLVSRLLQYSPSLRCTALEACA 419 (492)
Q Consensus 358 ~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~Li~~~L~~dP~~R~t~~e~l~ 419 (492)
+.+.+ +-+.|+++..++.-||..+|++||+.+|+..
T Consensus 515 ----------------yRlaQ----------P~NCPDeLf~vMacCWallpeeRPsf~Qlv~ 550 (563)
T KOG1024|consen 515 ----------------YRLAQ----------PFNCPDELFTVMACCWALLPEERPSFSQLVI 550 (563)
T ss_pred ----------------ceecC----------CCCCcHHHHHHHHHHHhcCcccCCCHHHHHH
Confidence 11111 2368999999999999999999999998753
No 407
>KOG1165 consensus Casein kinase (serine/threonine/tyrosine protein kinase) [Signal transduction mechanisms]
Probab=99.94 E-value=4.3e-26 Score=214.04 Aligned_cols=219 Identities=22% Similarity=0.312 Sum_probs=177.7
Q ss_pred ccceeEeeeeccCCceEEEEEEEcCCCCEEEEEEec--cchhhHHHHHHHHHHcC-CCCccccceeeeeccCCCceEEEE
Q 011138 136 TISYMAERVVGTGSFGVVFQAKCLETGDSVAIKKVL--QDKRYKNRELQIMRLLN-HPNVVSLKHCFFSTTEKDELYLNL 212 (492)
Q Consensus 136 ~~~y~~~~~lG~G~fg~Vy~~~~~~~g~~vAiK~~~--~~~~~~~~E~~il~~l~-h~nIv~l~~~~~~~~~~~~~~~~l 212 (492)
...|.++++||+|+||.++.|++.-+++.||||.-. .+...+..|....+.|. .++|...|-+. ....+-.|
T Consensus 27 G~hyrVGkKIGeGsFG~lf~G~Nl~nne~VAIKfEPrkS~APQLrdEYr~YKlL~g~~GIP~vYYFG-----qeG~~NiL 101 (449)
T KOG1165|consen 27 GPHYRVGKKIGEGSFGVLFLGKNLYNNEPVAIKFEPRKSEAPQLRDEYRTYKLLGGTEGIPQVYYFG-----QEGKYNIL 101 (449)
T ss_pred cccceeccccccCcceeeecccccccCceEEEEeccccCCcchHHHHHHHHHHHcCCCCCCceeeec-----cccchhhh
Confidence 346999999999999999999999999999999753 33445667999999886 68898876544 44556679
Q ss_pred EeeechhhHHHHhhhhhhcCCCcCHHHHHHHHHHHHHHHHHHHhhCCcccCCCCCCceEEcCC----CCcEEEeeecCcc
Q 011138 213 VLEYISETVYRVSKHYTRMNQHVPILYVQLYTYQICRALNYLHHVVGVCHRDIKPQNLLVNPH----THQLKICDFGSAK 288 (492)
Q Consensus 213 V~E~~~~~l~~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~yLH~~~givHrDlKp~NILl~~~----~~~vkL~DFG~a~ 288 (492)
|||+++.+|.+++.. ....|+...+..++.|++.-++|+|. +.+|+|||||+|+||..- .+.|.|+|||+|+
T Consensus 102 VidLLGPSLEDLFD~---CgR~FSvKTV~miA~Qmi~rie~vH~-k~LIYRDIKPdNFLIGrp~~k~~n~IhiiDFGmAK 177 (449)
T KOG1165|consen 102 VIDLLGPSLEDLFDL---CGRRFSVKTVAMIAKQMITRIEYVHE-KDLIYRDIKPDNFLIGRPGTKDANVIHIIDFGMAK 177 (449)
T ss_pred hhhhhCcCHHHHHHH---hcCcccHHhHHHHHHHHHHHHHHHHh-cceeecccCccceeecCCCCCCCceEEEEeccchh
Confidence 999999888776543 46789999999999999999999997 999999999999999543 3469999999998
Q ss_pred ccCCC--------CCCccceeccCccCchhhcCCCCCCcchhhHHHHHHHHHHHhCCCCCCC---CChHHHHHHHHHHhC
Q 011138 289 MLVPG--------EPNISYICSRYYRAPELIFGATEYTTAIDMWSIGCVLAELLLGQPLFPG---ESGVDQLVEIIKILG 357 (492)
Q Consensus 289 ~~~~~--------~~~~~~~gt~~y~aPE~~~~~~~~~~~~DvwSlGvil~ell~G~~pf~~---~~~~~~~~~i~~~~g 357 (492)
...+. ....+..||..||+-...+|.+ -+...|+-|||-+++++|.|..||+| .+..+.+.+|-....
T Consensus 178 ~YrDp~TkqHIPYrE~KSLsGTARYMSINTHlGrE-QSRRDDLEaLGHvFmYFLRGsLPWQGLKA~tnK~kYeKIGe~Kr 256 (449)
T KOG1165|consen 178 EYRDPKTKQHIPYREHKSLSGTARYMSINTHLGRE-QSRRDDLEALGHVFMYFLRGSLPWQGLKADTNKEKYEKIGETKR 256 (449)
T ss_pred hhcCccccccCccccccccccceeeeEeeccccch-hhhhhhHHHhhhhhhhhccCCCccccccCcchHHHHHHhccccc
Confidence 77432 2334678999999999888876 68999999999999999999999987 455666666655444
Q ss_pred CCCHHHH
Q 011138 358 TPTREEI 364 (492)
Q Consensus 358 ~p~~~~~ 364 (492)
.-+.+.+
T Consensus 257 ~T~i~~L 263 (449)
T KOG1165|consen 257 STPIEVL 263 (449)
T ss_pred cCCHHHH
Confidence 4444443
No 408
>KOG1163 consensus Casein kinase (serine/threonine/tyrosine protein kinase) [Signal transduction mechanisms]
Probab=99.94 E-value=3.4e-26 Score=205.96 Aligned_cols=201 Identities=24% Similarity=0.346 Sum_probs=165.3
Q ss_pred cceeEeeeeccCCceEEEEEEEcCCCCEEEEEEeccch--hhHHHHHHHHHHcCC-CCccccceeeeeccCCCceEEEEE
Q 011138 137 ISYMAERVVGTGSFGVVFQAKCLETGDSVAIKKVLQDK--RYKNRELQIMRLLNH-PNVVSLKHCFFSTTEKDELYLNLV 213 (492)
Q Consensus 137 ~~y~~~~~lG~G~fg~Vy~~~~~~~g~~vAiK~~~~~~--~~~~~E~~il~~l~h-~nIv~l~~~~~~~~~~~~~~~~lV 213 (492)
.+|.+++.||.|+||.+|+|....+|+.||||.-.... ..+..|..+.+.|++ ..|..+..++ ....|-.+|
T Consensus 15 gky~lvrkiGsGSFGdIy~~~~i~~ge~VAiK~Es~~a~hpqL~yEskvY~iL~~g~GiP~i~~y~-----~e~~ynvlV 89 (341)
T KOG1163|consen 15 GKYKLVRKIGSGSFGDIYLGISITSGEEVAIKLESSKAKHPQLLYESKVYRILQGGVGIPHIRHYG-----TEKDYNVLV 89 (341)
T ss_pred cceEEEEeecCCchhheeeeeeccCCceEEEEeecccCCCcchhHHHHHHHHhccCCCCchhhhhc-----cccccceee
Confidence 46999999999999999999999999999999875543 334579999999975 5677776666 555567799
Q ss_pred eeechhhHHHHhhhhhhcCCCcCHHHHHHHHHHHHHHHHHHHhhCCcccCCCCCCceEEc--CCCCcEEEeeecCccccC
Q 011138 214 LEYISETVYRVSKHYTRMNQHVPILYVQLYTYQICRALNYLHHVVGVCHRDIKPQNLLVN--PHTHQLKICDFGSAKMLV 291 (492)
Q Consensus 214 ~E~~~~~l~~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~yLH~~~givHrDlKp~NILl~--~~~~~vkL~DFG~a~~~~ 291 (492)
||+++.+|.+++... ...++...+..++-|++.-++|+|. +++|||||||+|+|.. ...+.+.|+|||+|+...
T Consensus 90 MdLLGPsLEdLfnfC---~R~ftmkTvLMLaDQml~RiEyvH~-r~fiHRDIKPdNFLMGlgrh~~kl~LIDFGLaKky~ 165 (341)
T KOG1163|consen 90 MDLLGPSLEDLFNFC---SRRFTMKTVLMLADQMLSRIEYVHL-RNFIHRDIKPDNFLMGLGRHCNKLYLIDFGLAKKYR 165 (341)
T ss_pred eeccCccHHHHHHHH---hhhhhHHhHHHHHHHHHHHHHHHHh-hccccccCCccceeeccccccceEEEEeccchhhhc
Confidence 999998888766543 4578889999999999999999996 9999999999999985 444579999999998764
Q ss_pred CCC--------CCccceeccCccCchhhcCCCCCCcchhhHHHHHHHHHHHhCCCCCCCCChHH
Q 011138 292 PGE--------PNISYICSRYYRAPELIFGATEYTTAIDMWSIGCVLAELLLGQPLFPGESGVD 347 (492)
Q Consensus 292 ~~~--------~~~~~~gt~~y~aPE~~~~~~~~~~~~DvwSlGvil~ell~G~~pf~~~~~~~ 347 (492)
+.. ......||..|.+-....+.. -+...|+-|+|.+|..+..|..||++.....
T Consensus 166 d~~t~~HIpyre~r~ltGTaRYASinAh~g~e-qSRRDDmeSvgYvLmYfnrG~LPWQglka~t 228 (341)
T KOG1163|consen 166 DIRTRQHIPYREDRNLTGTARYASINAHLGIE-QSRRDDMESVGYVLMYFNRGSLPWQGLKAAT 228 (341)
T ss_pred cccccccCccccCCccceeeeehhhhhhhhhh-hhhhhhhhhhcceeeeeecCCCcccccchhh
Confidence 322 234568999999988776544 5788999999999999999999999865443
No 409
>KOG1164 consensus Casein kinase (serine/threonine/tyrosine protein kinase) [Signal transduction mechanisms]
Probab=99.94 E-value=2.3e-25 Score=222.03 Aligned_cols=251 Identities=20% Similarity=0.206 Sum_probs=188.5
Q ss_pred ceeEeeeeccCCceEEEEEEEcCCC-CEEEEEEeccch----hhHHHHHHHHHHcCC----CCccccceeeeeccCCCce
Q 011138 138 SYMAERVVGTGSFGVVFQAKCLETG-DSVAIKKVLQDK----RYKNRELQIMRLLNH----PNVVSLKHCFFSTTEKDEL 208 (492)
Q Consensus 138 ~y~~~~~lG~G~fg~Vy~~~~~~~g-~~vAiK~~~~~~----~~~~~E~~il~~l~h----~nIv~l~~~~~~~~~~~~~ 208 (492)
+|.+.+.||+|+||.||.|.+..++ ..+|+|...... ..+..|..++..+.. +++..+++.+. ....
T Consensus 19 ~~~i~~~iG~G~fG~V~~v~~~~~~~~~~a~K~e~~~~~~~~~~l~~E~~vl~~l~~~~~~~~~~~~~~~G~----~~~~ 94 (322)
T KOG1164|consen 19 RYKLGKKIGEGGFGAVYLVSDKSEKNKEYAKKLEKKELGSKPSVLKIEIQVLKKLEKKNGPSHFPKLLDHGR----STED 94 (322)
T ss_pred ceEEeeeccccCCceEEEEEecCCCCeeEEEEEEEecccCCCccchhHHHHHHHHhhhcCCCCCCEEEEecc----CCCc
Confidence 6999999999999999999988775 678988765431 146679999999873 57888877662 2445
Q ss_pred EEEEEeeechhhHHHHhhhhhhcCCCcCHHHHHHHHHHHHHHHHHHHhhCCcccCCCCCCceEEcCCC----CcEEEeee
Q 011138 209 YLNLVLEYISETVYRVSKHYTRMNQHVPILYVQLYTYQICRALNYLHHVVGVCHRDIKPQNLLVNPHT----HQLKICDF 284 (492)
Q Consensus 209 ~~~lV~E~~~~~l~~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~yLH~~~givHrDlKp~NILl~~~~----~~vkL~DF 284 (492)
+-||||+.++.+|.++..... .+.++...+..++.|++.+|++||+ .|++||||||+|+++.... ..+.|.||
T Consensus 95 ~~~iVM~l~G~sL~dl~~~~~--~~~fs~~T~l~ia~q~l~~l~~lH~-~G~iHRDiKp~N~~~g~~~~~~~~~~~llDf 171 (322)
T KOG1164|consen 95 FNFIVMSLLGPSLEDLRKRNP--PGRFSRKTVLRIAIQNLNALEDLHS-KGFIHRDIKPENFVVGQSSRSEVRTLYLLDF 171 (322)
T ss_pred eeEEEEeccCccHHHHHHhCC--CCCcCHhHHHHHHHHHHHHHHHHHh-cCcccCCcCHHHeeecCCCCcccceEEEEec
Confidence 678999999999888654433 5789999999999999999999997 9999999999999997653 47999999
Q ss_pred cCcc--ccCCCC--------C-CccceeccCccCchhhcCCCCCCcchhhHHHHHHHHHHHhCCCCCCCCChHHHHHHHH
Q 011138 285 GSAK--MLVPGE--------P-NISYICSRYYRAPELIFGATEYTTAIDMWSIGCVLAELLLGQPLFPGESGVDQLVEII 353 (492)
Q Consensus 285 G~a~--~~~~~~--------~-~~~~~gt~~y~aPE~~~~~~~~~~~~DvwSlGvil~ell~G~~pf~~~~~~~~~~~i~ 353 (492)
|+++ ...... . .....||..|+++.+..+.. .+.+.|+||++.++.+|+.|..||.+........+..
T Consensus 172 Glar~~~~~~~~~~~~~~~r~~~~~~rGT~ry~S~~~H~~~e-~~r~DDles~~Y~l~el~~g~LPW~~~~~~~~~~~~~ 250 (322)
T KOG1164|consen 172 GLARRFKYVGDSGGNLRPPRPQKGLFRGTLRYASINVHLGIE-QGRRDDLESLFYMLLELLKGSLPWEALEMTDLKSKFE 250 (322)
T ss_pred CCCccccccCCCCcccccCCCCccCCCCccccccHHHhCCCc-cCCchhhhhHHHHHHHHhcCCCCCccccccchHHHHH
Confidence 9998 321111 1 22456999999999987655 7999999999999999999999998766433333322
Q ss_pred HHhCCCCHHHHhhcCCCCcccCCCcccCCCcccccCCCCChhHhhhhccccccCCCCcCCHHHhhCC
Q 011138 354 KILGTPTREEIKCMNPNYTEFKFPQIKAHPWHKIFHKRMPPEALDLVSRLLQYSPSLRCTALEACAH 420 (492)
Q Consensus 354 ~~~g~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~Li~~~L~~dP~~R~t~~e~l~H 420 (492)
+.... ..... +....+.++.++...+-..+...+|....+...
T Consensus 251 ~~~~~---------------~~~~~---------~~~~~~~~~~~~~~~~~~~~~~~~Pdy~~~~~~ 293 (322)
T KOG1164|consen 251 KDPRK---------------LLTDR---------FGDLKPEEFAKILEYIDSLDYEDKPDYEKLAEL 293 (322)
T ss_pred HHhhh---------------hcccc---------ccCCChHHHHHHHHHhhccCCcCCCCHHHHHHH
Confidence 21100 00000 112245667777777766888888887766543
No 410
>KOG0606 consensus Microtubule-associated serine/threonine kinase and related proteins [Signal transduction mechanisms; General function prediction only]
Probab=99.93 E-value=8.1e-27 Score=247.08 Aligned_cols=224 Identities=29% Similarity=0.500 Sum_probs=168.8
Q ss_pred cccceeEeeeeccCCceEEEEEEEcCCCCEEEEEEeccchhhHHHHHHHHHHcCCCCccccceeeeeccCCCceEEEEEe
Q 011138 135 QTISYMAERVVGTGSFGVVFQAKCLETGDSVAIKKVLQDKRYKNRELQIMRLLNHPNVVSLKHCFFSTTEKDELYLNLVL 214 (492)
Q Consensus 135 ~~~~y~~~~~lG~G~fg~Vy~~~~~~~g~~vAiK~~~~~~~~~~~E~~il~~l~h~nIv~l~~~~~~~~~~~~~~~~lV~ 214 (492)
...+|..++.|-.|+||.||.++++.+.+.+|+| +.++....++ |+.....|.+ |
T Consensus 81 ~e~df~~IklisngAygavylvrh~~trqrfa~k-iNkq~lilRn---ilt~a~npfv--------------------v- 135 (1205)
T KOG0606|consen 81 SESDFNTIKLISNGAYGAVYLVRHKETRQRFAMK-INKQNLILRN---ILTFAGNPFV--------------------V- 135 (1205)
T ss_pred CccccceeEeeccCCCCceeeeeccccccchhhc-ccccchhhhc---cccccCCcce--------------------e-
Confidence 3456999999999999999999999999999994 5444433332 2222222222 2
Q ss_pred eechhhHHHHhhhhhhcCCCcCHHHHHHHHHHHHHHHHHHHhhCCcccCCCCCCceEEcCCCCcEEEeeecCccccCCCC
Q 011138 215 EYISETVYRVSKHYTRMNQHVPILYVQLYTYQICRALNYLHHVVGVCHRDIKPQNLLVNPHTHQLKICDFGSAKMLVPGE 294 (492)
Q Consensus 215 E~~~~~l~~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~yLH~~~givHrDlKp~NILl~~~~~~vkL~DFG~a~~~~~~~ 294 (492)
|+...+++. -..++. +++.+++|||+ .||+|||+||+|++|+.-| .+|++|||+.++.....
T Consensus 136 ----gDc~tllk~----~g~lPv--------dmvla~Eylh~-ygivhrdlkpdnllIT~mG-hiKlTDfgLsk~GLms~ 197 (1205)
T KOG0606|consen 136 ----GDCATLLKN----IGPLPV--------DMVLAVEYLHS-YGIVHRDLKPDNLLITSMG-HIKLTDFGLSKKGLMSL 197 (1205)
T ss_pred ----chhhhhccc----CCCCcc--------hhhHHhHhhcc-CCeecCCCCCCcceeeecc-cccccchhhhhhhhhhc
Confidence 322222222 123332 34789999997 9999999999999999888 69999999987542110
Q ss_pred ----------------CCccceeccCccCchhhcCCCCCCcchhhHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCC
Q 011138 295 ----------------PNISYICSRYYRAPELIFGATEYTTAIDMWSIGCVLAELLLGQPLFPGESGVDQLVEIIKILGT 358 (492)
Q Consensus 295 ----------------~~~~~~gt~~y~aPE~~~~~~~~~~~~DvwSlGvil~ell~G~~pf~~~~~~~~~~~i~~~~g~ 358 (492)
.....+|||.|+|||++...+ |+..+|||++|+|+||.+.|..||.+++.++.+...+....
T Consensus 198 atnl~eg~I~k~t~Ef~dKqvcgTPeyiaPeVilrqg-ygkpvdwwamGiIlyeFLVgcvpffGdtpeelfg~visd~i- 275 (1205)
T KOG0606|consen 198 ATNLKEGHIEKDTHEFQDKQVCGTPEYIAPEVILRQG-YGKPVDWWAMGIILYEFLVGCVPFFGDTPEELFGQVISDDI- 275 (1205)
T ss_pred cchhhhcchHHHHHHhhhccccCCccccChhhhhhhc-cCCCccHHHHHHHHHHHheeeeeccCCCHHHHHhhhhhhhc-
Confidence 012458999999999997655 99999999999999999999999999999988888776322
Q ss_pred CCHHHHhhcCCCCcccCCCcccCCCcccccCCCCChhHhhhhccccccCCCCcC---CHHHhhCCCCCCCCCC
Q 011138 359 PTREEIKCMNPNYTEFKFPQIKAHPWHKIFHKRMPPEALDLVSRLLQYSPSLRC---TALEACAHPFFDDLRD 428 (492)
Q Consensus 359 p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~Li~~~L~~dP~~R~---t~~e~l~Hp~f~~~~~ 428 (492)
.+|. - ...++++++++|.++|+.+|..|. .+.++.+|+||+.+..
T Consensus 276 ----------------~wpE--------~-dea~p~Ea~dli~~LL~qnp~~Rlgt~ga~evk~h~ff~~LDw 323 (1205)
T KOG0606|consen 276 ----------------EWPE--------E-DEALPPEAQDLIEQLLRQNPLCRLGTGGALEVKQHGFFQLLDW 323 (1205)
T ss_pred ----------------cccc--------c-CcCCCHHHHHHHHHHHHhChHhhcccchhhhhhhccceeeccc
Confidence 2222 1 234789999999999999999997 5778999999998765
No 411
>PRK09188 serine/threonine protein kinase; Provisional
Probab=99.93 E-value=5.6e-26 Score=226.63 Aligned_cols=157 Identities=20% Similarity=0.295 Sum_probs=121.4
Q ss_pred cccceeEeeeeccCCceEEEEEEEcC-CCCEEEEEEeccc---------hhhHHHHHHHHHHcCCCCccc-cceeeeecc
Q 011138 135 QTISYMAERVVGTGSFGVVFQAKCLE-TGDSVAIKKVLQD---------KRYKNRELQIMRLLNHPNVVS-LKHCFFSTT 203 (492)
Q Consensus 135 ~~~~y~~~~~lG~G~fg~Vy~~~~~~-~g~~vAiK~~~~~---------~~~~~~E~~il~~l~h~nIv~-l~~~~~~~~ 203 (492)
....|.+.+.||+|+||+||+|.+.. +++.||||++... ...+.+|+++|+.++|+||+. ++++ .
T Consensus 16 ~~~~Y~~~~~IG~G~fg~Vy~a~~~~~~~~~vAiK~~~~~~~~~~~~~~~~~~~~E~~iL~~L~h~~iv~~l~~~----~ 91 (365)
T PRK09188 16 LSARFVETAVLKRDVFSTVERGYFAGDPGTARAVRRRVSEVPWWSKPLARHLAAREIRALKTVRGIGVVPQLLAT----G 91 (365)
T ss_pred ccCCceEccEEeecCcEEEEEEEEcCCCCeEEEEEEecccccccccHHHHHHHHHHHHHHHhccCCCCCcEEEEc----C
Confidence 34569999999999999999998876 6788899986422 234678999999999999985 4331 1
Q ss_pred CCCceEEEEEeeechhhHHHHhhhhhhcCCCcCHHHHHHHHHHHHHHHHHHHhhCCcccCCC-CCCceEEcCCCCcEEEe
Q 011138 204 EKDELYLNLVLEYISETVYRVSKHYTRMNQHVPILYVQLYTYQICRALNYLHHVVGVCHRDI-KPQNLLVNPHTHQLKIC 282 (492)
Q Consensus 204 ~~~~~~~~lV~E~~~~~l~~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~yLH~~~givHrDl-Kp~NILl~~~~~~vkL~ 282 (492)
..||||||+.|+.+.... ... ...++.|++.+|.|||+ +||+|||| ||+|||++.++ .+||+
T Consensus 92 -----~~~LVmE~~~G~~L~~~~-------~~~---~~~~~~~i~~aL~~lH~-~gIiHrDL~KP~NILv~~~~-~ikLi 154 (365)
T PRK09188 92 -----KDGLVRGWTEGVPLHLAR-------PHG---DPAWFRSAHRALRDLHR-AGITHNDLAKPQNWLMGPDG-EAAVI 154 (365)
T ss_pred -----CcEEEEEccCCCCHHHhC-------ccc---hHHHHHHHHHHHHHHHH-CCCeeCCCCCcceEEEcCCC-CEEEE
Confidence 268999999987554211 011 14578899999999997 99999999 99999998777 79999
Q ss_pred eecCccccCCCCC---------CccceeccCccCchhhc
Q 011138 283 DFGSAKMLVPGEP---------NISYICSRYYRAPELIF 312 (492)
Q Consensus 283 DFG~a~~~~~~~~---------~~~~~gt~~y~aPE~~~ 312 (492)
|||+|+.+..... .....+++.|+|||.+.
T Consensus 155 DFGlA~~~~~~~~~~~~~~~~d~~~~~~~~~~~~pe~~~ 193 (365)
T PRK09188 155 DFQLASVFRRRGALYRIAAYEDLRHLLKHKRTYAPDALT 193 (365)
T ss_pred ECccceecccCcchhhhhhhhhhhhhhccCccCCcccCC
Confidence 9999986643321 12456788899999884
No 412
>COG0515 SPS1 Serine/threonine protein kinase [General function prediction only / Signal transduction mechanisms / Transcription / DNA replication, recombination, and repair]
Probab=99.93 E-value=1.7e-24 Score=213.21 Aligned_cols=262 Identities=34% Similarity=0.477 Sum_probs=197.2
Q ss_pred eeEeeeeccCCceEEEEEEEcCCCCEEEEEEeccc-------hhhHHHHHHHHHHcCCC-CccccceeeeeccCCCceEE
Q 011138 139 YMAERVVGTGSFGVVFQAKCLETGDSVAIKKVLQD-------KRYKNRELQIMRLLNHP-NVVSLKHCFFSTTEKDELYL 210 (492)
Q Consensus 139 y~~~~~lG~G~fg~Vy~~~~~~~g~~vAiK~~~~~-------~~~~~~E~~il~~l~h~-nIv~l~~~~~~~~~~~~~~~ 210 (492)
|.+.+.||.|+||.||.+.+. ..+++|.+... .....+|+.+++.+.|+ +|+++++++ ......
T Consensus 2 ~~~~~~l~~g~~~~v~~~~~~---~~~~~k~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~i~~~~~~~-----~~~~~~ 73 (384)
T COG0515 2 YRILRKLGEGSFGEVYLARDR---KLVALKVLAKKLESKSKEVERFLREIQILASLNHPPNIVKLYDFF-----QDEGSL 73 (384)
T ss_pred ceeEEeecCCCCeEEEEEEec---cEEEEEeechhhccchhHHHHHHHHHHHHHHccCCcceeeEEEEE-----ecCCEE
Confidence 778889999999999999986 77899987443 23355799999999988 799999988 333337
Q ss_pred EEEeeechhhHHHHhhhhhhcCCCcCHHHHHHHHHHHHHHHHHHHhhCCcccCCCCCCceEEcCCCCcEEEeeecCcccc
Q 011138 211 NLVLEYISETVYRVSKHYTRMNQHVPILYVQLYTYQICRALNYLHHVVGVCHRDIKPQNLLVNPHTHQLKICDFGSAKML 290 (492)
Q Consensus 211 ~lV~E~~~~~l~~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~yLH~~~givHrDlKp~NILl~~~~~~vkL~DFG~a~~~ 290 (492)
+++++++.++.+............+....+..++.|++.++.|+|+ .|++||||||+||+++..+..++++|||.++..
T Consensus 74 ~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~H~-~~~~hrd~kp~nil~~~~~~~~~l~dfg~~~~~ 152 (384)
T COG0515 74 YLVMEYVDGGSLEDLLKKIGRKGPLSESEALFILAQILSALEYLHS-KGIIHRDIKPENILLDRDGRVVKLIDFGLAKLL 152 (384)
T ss_pred EEEEecCCCCcHHHHHHhcccccCCCHHHHHHHHHHHHHHHHHHHh-CCeeccCCCHHHeeecCCCCeEEEeccCcceec
Confidence 8999999976554211111000268889999999999999999997 899999999999999987645999999999755
Q ss_pred CCCC-------CCccceeccCccCchhhcCC--CCCCcchhhHHHHHHHHHHHhCCCCCCCCCh---HHHHHHHHHHhCC
Q 011138 291 VPGE-------PNISYICSRYYRAPELIFGA--TEYTTAIDMWSIGCVLAELLLGQPLFPGESG---VDQLVEIIKILGT 358 (492)
Q Consensus 291 ~~~~-------~~~~~~gt~~y~aPE~~~~~--~~~~~~~DvwSlGvil~ell~G~~pf~~~~~---~~~~~~i~~~~g~ 358 (492)
.... ......||..|+|||.+.+. ..+....|+||+|++++++++|..||..... .......+.....
T Consensus 153 ~~~~~~~~~~~~~~~~~~t~~~~~pe~~~~~~~~~~~~~~D~~s~g~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~ 232 (384)
T COG0515 153 PDPGSTSSIPALPSTSVGTPGYMAPEVLLGLSLAYASSSSDIWSLGITLYELLTGLPPFEGEKNSSATSQTLKIILELPT 232 (384)
T ss_pred CCCCccccccccccccccccccCCHHHhcCCCCCCCCchHhHHHHHHHHHHHHhCCCCCCCCCccccHHHHHHHHHhcCC
Confidence 4332 23567899999999999764 4688999999999999999999999887764 4444444443322
Q ss_pred CCHHHHhhcCCCCcccCCCcccCCCcccccCCCCChhHhhhhccccccCCCCcCCHHHhhCCCCCCCCCC
Q 011138 359 PTREEIKCMNPNYTEFKFPQIKAHPWHKIFHKRMPPEALDLVSRLLQYSPSLRCTALEACAHPFFDDLRD 428 (492)
Q Consensus 359 p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~Li~~~L~~dP~~R~t~~e~l~Hp~f~~~~~ 428 (492)
+. ...+.... ........+.+++.+++..+|..|.+..+...++|......
T Consensus 233 ~~-------------~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~~ 283 (384)
T COG0515 233 PS-------------LASPLSPS------NPELISKAASDLLKKLLAKDPKNRLSSSSDLSHDLLAHLKL 283 (384)
T ss_pred cc-------------cccccCcc------ccchhhHHHHHHHHHHHhcCchhcCCHHHHhhchHhhCccc
Confidence 20 00000000 00112367899999999999999999999999977765443
No 413
>KOG0603 consensus Ribosomal protein S6 kinase [Signal transduction mechanisms]
Probab=99.92 E-value=3.4e-26 Score=232.01 Aligned_cols=236 Identities=29% Similarity=0.443 Sum_probs=187.1
Q ss_pred eeccCCceEEEEEEE---cCCCCEEEEEEeccc------hhhHHHHHHHHHHcC-CCCccccceeeeeccCCCceEEEEE
Q 011138 144 VVGTGSFGVVFQAKC---LETGDSVAIKKVLQD------KRYKNRELQIMRLLN-HPNVVSLKHCFFSTTEKDELYLNLV 213 (492)
Q Consensus 144 ~lG~G~fg~Vy~~~~---~~~g~~vAiK~~~~~------~~~~~~E~~il~~l~-h~nIv~l~~~~~~~~~~~~~~~~lV 213 (492)
.+|+|+||.|+++.. ...|..+|+|...+. ......|..++..++ ||.+|+++.+|.+ ...++++
T Consensus 1 vlg~g~~gkvfLvrk~~g~da~~~yamkvl~k~t~~~~~~~~t~~er~il~~~~~~~f~v~lhyafqt-----~~kl~l~ 75 (612)
T KOG0603|consen 1 VLGQGSYGKVFLVRKAGGADAGHLYAMKVLKKATLKVRDRTHTKQERIILAFVHNTPFLVKLHYAFQT-----DGKLYLI 75 (612)
T ss_pred CCCcCCCcchHHHHHhccccccchhhhhcccccccccccccccccHHHHHhhccCCCceeeeeeeecc-----ccchhHh
Confidence 379999999987742 345677888876432 123345888999887 9999999888843 3448899
Q ss_pred eeechhhHHHHhhhhhhcCCCcCHHHHHHHHHHHHHHHHHHHhhCCcccCCCCCCceEEcCCCCcEEEeeecCccccCCC
Q 011138 214 LEYISETVYRVSKHYTRMNQHVPILYVQLYTYQICRALNYLHHVVGVCHRDIKPQNLLVNPHTHQLKICDFGSAKMLVPG 293 (492)
Q Consensus 214 ~E~~~~~l~~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~yLH~~~givHrDlKp~NILl~~~~~~vkL~DFG~a~~~~~~ 293 (492)
+++..|+.+ ..+ ......+.+..++.+...++.+++++|+ .||+|||+|++||+++.+| .+|+.|||+++.....
T Consensus 76 ld~~rgg~l--ft~-l~~~~~f~~~~~~~~~aelaLald~lh~-l~iiyrd~k~enilld~~G-hi~~tdfglske~v~~ 150 (612)
T KOG0603|consen 76 LDFLRGGDL--FTR-LSKEVMFDELDVAFYLAELALALDHLHK-LGIAYRDYKLENVLLLLEG-HIKLTDFGLSKEAVKE 150 (612)
T ss_pred hhhcccchh--hhc-cccCCchHHHHHHHHHHHHHHHHhhcch-hHHHHhcccccceeecccC-ccccCCchhhhHhHhh
Confidence 999987522 122 2234567788899999999999999997 8999999999999999999 5999999999877544
Q ss_pred CCCccceeccCccCchhhcCCCCCCcchhhHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCCHHHHhhcCCCCcc
Q 011138 294 EPNISYICSRYYRAPELIFGATEYTTAIDMWSIGCVLAELLLGQPLFPGESGVDQLVEIIKILGTPTREEIKCMNPNYTE 373 (492)
Q Consensus 294 ~~~~~~~gt~~y~aPE~~~~~~~~~~~~DvwSlGvil~ell~G~~pf~~~~~~~~~~~i~~~~g~p~~~~~~~~~~~~~~ 373 (492)
... |||..|||||++. ....++|+||||+++|||++|..||.+ +....|.+. .
T Consensus 151 ~~~---cgt~eymApEI~~---gh~~a~D~ws~gvl~felltg~~pf~~----~~~~~Il~~-----------------~ 203 (612)
T KOG0603|consen 151 KIA---CGTYEYRAPEIIN---GHLSAADWWSFGVLAFELLTGTLPFGG----DTMKRILKA-----------------E 203 (612)
T ss_pred hhc---ccchhhhhhHhhh---ccCCcccchhhhhhHHHHhhCCCCCch----HHHHHHhhh-----------------c
Confidence 433 9999999999996 367899999999999999999999987 555555551 1
Q ss_pred cCCCcccCCCcccccCCCCChhHhhhhccccccCCCCcCC-----HHHhhCCCCCCCCCC
Q 011138 374 FKFPQIKAHPWHKIFHKRMPPEALDLVSRLLQYSPSLRCT-----ALEACAHPFFDDLRD 428 (492)
Q Consensus 374 ~~~~~~~~~~~~~~~~~~~s~~~~~Li~~~L~~dP~~R~t-----~~e~l~Hp~f~~~~~ 428 (492)
.. ++..++.++++++..++..+|..|.. +.++++|+||+.+..
T Consensus 204 ~~------------~p~~l~~~a~~~~~~l~~r~p~nrLg~~~~~~~eik~h~f~~~i~~ 251 (612)
T KOG0603|consen 204 LE------------MPRELSAEARSLFRQLFKRNPENRLGAGPDGVDEIKQHEFFQSIDW 251 (612)
T ss_pred cC------------CchhhhHHHHHHHHHHHhhCHHHHhccCcchhHHHhccchheeeeH
Confidence 11 22357889999999999999999985 479999999987654
No 414
>PF14531 Kinase-like: Kinase-like; PDB: 3DZO_A 2W1Z_A 3BYV_A 3Q5Z_A 3Q60_A.
Probab=99.90 E-value=1.4e-23 Score=201.01 Aligned_cols=237 Identities=24% Similarity=0.328 Sum_probs=145.1
Q ss_pred ceeEeeeeccCCceEEEEEEEcCCCCEEEEEEeccchhh-------HHHHHHHHHHcC----------CCCccccceeee
Q 011138 138 SYMAERVVGTGSFGVVFQAKCLETGDSVAIKKVLQDKRY-------KNRELQIMRLLN----------HPNVVSLKHCFF 200 (492)
Q Consensus 138 ~y~~~~~lG~G~fg~Vy~~~~~~~g~~vAiK~~~~~~~~-------~~~E~~il~~l~----------h~nIv~l~~~~~ 200 (492)
.+..++.||.|+|+.||.+.+..||+.+|+|++...... .++|.-....+. |-.++..++...
T Consensus 13 ~l~~~~~i~~g~~~~v~~v~d~~t~~~~avkvf~~~~~~~~~~~~~~~~e~l~~~~~~~~~~p~~a~~~~r~l~P~d~~~ 92 (288)
T PF14531_consen 13 TLVRGRIIGKGGFSIVFEVTDVETGEEFAVKVFLLPADASANEYEQLKEEQLAITLFPGVKNPKEAYRHLRFLVPLDLLR 92 (288)
T ss_dssp EEEEEEEEEEETTEEEEEEEETTTTEEEEEEEEEESSTTHTTHHHHHHHHHHGGGGSTT--SHHHHHHHH-B---SEEEE
T ss_pred EEEEccccccCCceEEEEEEEccCCceEEEEEEecccccchHHHHHHHHHHHHhhhhccCCCHHHHHHhceEEeeeEEEE
Confidence 367888999999999999999999999999987433221 122221211111 112222222221
Q ss_pred ec--------cCCCce----EEEEEeeechhhHHHHhhhhhhcCCC---cCHHHHHHHHHHHHHHHHHHHhhCCcccCCC
Q 011138 201 ST--------TEKDEL----YLNLVLEYISETVYRVSKHYTRMNQH---VPILYVQLYTYQICRALNYLHHVVGVCHRDI 265 (492)
Q Consensus 201 ~~--------~~~~~~----~~~lV~E~~~~~l~~~~~~~~~~~~~---~~~~~~~~i~~qi~~aL~yLH~~~givHrDl 265 (492)
.. ...... ..+++|+-+.+++..++......... +.......+..|+++.+++||+ .||||+||
T Consensus 93 i~~~~~~~~~~~~~~~~~v~n~~~l~P~~~~dL~~~~~~l~~~~~~~~~l~~~arl~lT~Q~I~lvA~Lh~-~GlVHgdi 171 (288)
T PF14531_consen 93 IPGKPPFFERGPGQSIYWVLNRFLLMPRAQGDLQDLVEALFSRAQTHSPLAFAARLSLTVQMIRLVANLHS-YGLVHGDI 171 (288)
T ss_dssp ETTS-SEEEECETTEEEEEESEEEEEE--SEEHHHHHHHHHHHTTTSHHHHHHHHHHHHHHHHHHHHHHHH-TTEEEST-
T ss_pred EcCCCcceecCCCCccceeehhhhccchhhhcHHHHHHHHhhcccccchhHHHHHHHHHHHHHHHHHHHhh-cceEeccc
Confidence 11 111111 24678888888877765543322222 2223334566899999999997 99999999
Q ss_pred CCCceEEcCCCCcEEEeeecCccccCCCCCCccceeccCccCchhhcCC-------CCCCcchhhHHHHHHHHHHHhCCC
Q 011138 266 KPQNLLVNPHTHQLKICDFGSAKMLVPGEPNISYICSRYYRAPELIFGA-------TEYTTAIDMWSIGCVLAELLLGQP 338 (492)
Q Consensus 266 Kp~NILl~~~~~~vkL~DFG~a~~~~~~~~~~~~~gt~~y~aPE~~~~~-------~~~~~~~DvwSlGvil~ell~G~~ 338 (492)
||+|+|++.+| .++|+||+..... +........+..|.+||..... ..++.+.|.|+||+++|.|.||..
T Consensus 172 ~~~nfll~~~G-~v~Lg~F~~~~r~--g~~~~~~~~~~~~~PPe~~~~~~~~~~~~~~~t~~~DaW~LG~~ly~lWC~~l 248 (288)
T PF14531_consen 172 KPENFLLDQDG-GVFLGDFSSLVRA--GTRYRCSEFPVAFTPPELESCAGQFGQNNAPYTFATDAWQLGITLYSLWCGRL 248 (288)
T ss_dssp SGGGEEE-TTS--EEE--GGGEEET--TEEEEGGGS-TTTS-HHHHHHHTSCHHSEEEE-HHHHHHHHHHHHHHHHHSS-
T ss_pred ceeeEEEcCCC-CEEEcChHHHeec--CceeeccCCCcccCChhhhhhhcccCcccceeeeccCHHHHHHHHHHHHHccC
Confidence 99999999998 7999999987644 3222224456789999987432 247889999999999999999999
Q ss_pred CCCCCChHHHHHHHHHHhCCCCHHHHhhcCCCCcccCCCcccCCCcccccCCCCChhHhhhhccccccCCCCc
Q 011138 339 LFPGESGVDQLVEIIKILGTPTREEIKCMNPNYTEFKFPQIKAHPWHKIFHKRMPPEALDLVSRLLQYSPSLR 411 (492)
Q Consensus 339 pf~~~~~~~~~~~i~~~~g~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~Li~~~L~~dP~~R 411 (492)
||........ .+. .|.. . .++|+.+++||..||+.||.+|
T Consensus 249 Pf~~~~~~~~-----------------------~~~--------~f~~-C-~~~Pe~v~~LI~~lL~~~~~~R 288 (288)
T PF14531_consen 249 PFGLSSPEAD-----------------------PEW--------DFSR-C-RDMPEPVQFLIRGLLQRNPEDR 288 (288)
T ss_dssp STCCCGGGST-----------------------SGG--------GGTT-S-S---HHHHHHHHHHT-SSGGGS
T ss_pred CCCCCCcccc-----------------------ccc--------cchh-c-CCcCHHHHHHHHHHccCCcccC
Confidence 9976542110 000 1111 1 2689999999999999999988
No 415
>KOG4158 consensus BRPK/PTEN-induced protein kinase [Signal transduction mechanisms]
Probab=99.89 E-value=3.2e-23 Score=198.89 Aligned_cols=195 Identities=26% Similarity=0.369 Sum_probs=141.6
Q ss_pred CCCCccccceeeeeccC----------------------CCceEEEEEeeechhhHHHHhhhhhhcCCCcCHHHHHHHHH
Q 011138 188 NHPNVVSLKHCFFSTTE----------------------KDELYLNLVLEYISETVYRVSKHYTRMNQHVPILYVQLYTY 245 (492)
Q Consensus 188 ~h~nIv~l~~~~~~~~~----------------------~~~~~~~lV~E~~~~~l~~~~~~~~~~~~~~~~~~~~~i~~ 245 (492)
.|||||++..+|.+.-. .....+|+||-....+|...+. .+..+....+.++.
T Consensus 274 ~HPNIvri~~aF~dsv~~lPda~~~YPdalp~R~~p~g~g~~~tlylvMkrY~~tLr~yl~-----~~~~s~r~~~~~la 348 (598)
T KOG4158|consen 274 KHPNIVRIQTAFIDSVKVLPDAIERYPDALPARWYPSGAGEPKTLYLVMKRYRQTLREYLW-----TRHRSYRTGRVILA 348 (598)
T ss_pred CCCCEEeehhhhhhhhccCCchhhhCcccccceecccccCCCceEEEehhcchhhHHHHHh-----cCCCchHHHHHHHH
Confidence 49999999888743211 2234688999998887766543 35567778889999
Q ss_pred HHHHHHHHHHhhCCcccCCCCCCceEE--cCCC-CcEEEeeecCccccCC-------CCCCccceeccCccCchhhcCCC
Q 011138 246 QICRALNYLHHVVGVCHRDIKPQNLLV--NPHT-HQLKICDFGSAKMLVP-------GEPNISYICSRYYRAPELIFGAT 315 (492)
Q Consensus 246 qi~~aL~yLH~~~givHrDlKp~NILl--~~~~-~~vkL~DFG~a~~~~~-------~~~~~~~~gt~~y~aPE~~~~~~ 315 (492)
|+++|+.|||+ +||.|||||.+|||| +.|+ ..+.|+|||++-.-.. ........|...-||||+.....
T Consensus 349 QlLEav~hL~~-hgvAhRDlKSDNiL~ElddD~~P~LVvaDFGCcLAd~~hGlqlpy~S~~Vd~GGNa~lmAPEi~ta~P 427 (598)
T KOG4158|consen 349 QLLEAVTHLHK-HGVAHRDLKSDNILLELDDDEIPQLVVADFGCCLADDNHGLQLPYESDEVDLGGNAKLMAPEIATAVP 427 (598)
T ss_pred HHHHHHHHHHH-ccchhhcccccceEEEecCCCCcEEEEcccceeeeccccccccccccccccCCCcceecchhhhhcCC
Confidence 99999999997 999999999999998 3232 3588999998742211 11122345677899999984332
Q ss_pred C-----CCcchhhHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCCHHHHhhcCCCCcccCCCcccCCCcccccCC
Q 011138 316 E-----YTTAIDMWSIGCVLAELLLGQPLFPGESGVDQLVEIIKILGTPTREEIKCMNPNYTEFKFPQIKAHPWHKIFHK 390 (492)
Q Consensus 316 ~-----~~~~~DvwSlGvil~ell~G~~pf~~~~~~~~~~~i~~~~g~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 390 (492)
. .-.++|.|+.|.+.||+++...||.+..... + -..+|.+-++|. +++
T Consensus 428 Gp~avvny~kAD~WA~GalaYEIfg~~NPFY~rGem~-L-----------------~~r~Yqe~qLPa---------lp~ 480 (598)
T KOG4158|consen 428 GPNAVVNYEKADTWAAGALAYEIFGRSNPFYKRGEML-L-----------------DTRTYQESQLPA---------LPS 480 (598)
T ss_pred CCceeeccchhhhhhhhhhHHHHhccCCcccccchhe-e-----------------chhhhhhhhCCC---------Ccc
Confidence 1 1237899999999999999999998733110 0 011234444444 446
Q ss_pred CCChhHhhhhccccccCCCCcCCHH
Q 011138 391 RMPPEALDLVSRLLQYSPSLRCTAL 415 (492)
Q Consensus 391 ~~s~~~~~Li~~~L~~dP~~R~t~~ 415 (492)
.+++.+++|+..+|+.||++|+++.
T Consensus 481 ~vpp~~rqlV~~lL~r~pskRvsp~ 505 (598)
T KOG4158|consen 481 RVPPVARQLVFDLLKRDPSKRVSPN 505 (598)
T ss_pred cCChHHHHHHHHHhcCCccccCCcc
Confidence 7899999999999999999999854
No 416
>cd05147 RIO1_euk RIO kinase family; eukaryotic RIO1, catalytic domain. The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO1 is present in archaea, bacteria and eukaryotes. This subfamily is composed of RIO1 proteins from eukaryotes. RIO1 is essential for survival and is required for 18S rRNA processing, proper cell cycle progression and c
Probab=99.88 E-value=1.3e-22 Score=186.16 Aligned_cols=135 Identities=18% Similarity=0.248 Sum_probs=103.3
Q ss_pred eeeeccCCceEEEEEEEcCCCCEEEEEEeccchh------------------------------hHHHHHHHHHHcCCCC
Q 011138 142 ERVVGTGSFGVVFQAKCLETGDSVAIKKVLQDKR------------------------------YKNRELQIMRLLNHPN 191 (492)
Q Consensus 142 ~~~lG~G~fg~Vy~~~~~~~g~~vAiK~~~~~~~------------------------------~~~~E~~il~~l~h~n 191 (492)
...||+|+||.||+|.+. +|+.||||++..+.. ...+|+.++..+.+++
T Consensus 2 ~~~ig~G~~~~Vy~a~~~-~g~~vAvKv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~ 80 (190)
T cd05147 2 NGCISTGKEANVYHATTA-NGEERAIKIYKTSILVFKDRDRYVSGEFRFRHGYCKSNPRKMVRTWAEKEMRNLKRLVTAG 80 (190)
T ss_pred CCccccccceEEEEEECC-CCCEEEEEEEEecccccccHHHhhcCCchhhccccCCCHHHHHHHHHHHHHHHHHHHHHCC
Confidence 357999999999999986 899999999854311 1124999999998887
Q ss_pred ccccceeeeeccCCCceEEEEEeeechhhHHHHhhhhhhcCCCcCHHHHHHHHHHHHHHHHHH-HhhCCcccCCCCCCce
Q 011138 192 VVSLKHCFFSTTEKDELYLNLVLEYISETVYRVSKHYTRMNQHVPILYVQLYTYQICRALNYL-HHVVGVCHRDIKPQNL 270 (492)
Q Consensus 192 Iv~l~~~~~~~~~~~~~~~~lV~E~~~~~l~~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~yL-H~~~givHrDlKp~NI 270 (492)
+.....+. ... .+|||||++|+.+.... .....++...+..++.||+.+|.|| |+ .||+||||||+||
T Consensus 81 v~~p~~~~-----~~~--~~iVmE~i~g~~l~~~~---~~~~~~~~~~~~~i~~qi~~~L~~l~H~-~giiHrDlkP~NI 149 (190)
T cd05147 81 IPCPEPIL-----LKS--HVLVMEFIGDDGWAAPR---LKDAPLSESKARELYLQVIQIMRILYQD-CRLVHADLSEYNL 149 (190)
T ss_pred CCCCcEEE-----ecC--CEEEEEEeCCCCCcchh---hhcCCCCHHHHHHHHHHHHHHHHHHHHh-CCcccCCCCHHHE
Confidence 75443322 111 26999999986432111 1135688889999999999999999 66 8999999999999
Q ss_pred EEcCCCCcEEEeeecCcccc
Q 011138 271 LVNPHTHQLKICDFGSAKML 290 (492)
Q Consensus 271 Ll~~~~~~vkL~DFG~a~~~ 290 (492)
|++. + .++|+|||+|...
T Consensus 150 li~~-~-~v~LiDFG~a~~~ 167 (190)
T cd05147 150 LYHD-G-KLYIIDVSQSVEH 167 (190)
T ss_pred EEEC-C-cEEEEEccccccC
Confidence 9984 4 6999999999743
No 417
>PRK12274 serine/threonine protein kinase; Provisional
Probab=99.88 E-value=4.7e-22 Score=181.20 Aligned_cols=182 Identities=18% Similarity=0.140 Sum_probs=134.3
Q ss_pred eEeeeeccCCceEEEEEEEcCCCCEEEEEEeccchh--------hHHHHHHHHHHcC-CCCccccceeeeeccCCCceEE
Q 011138 140 MAERVVGTGSFGVVFQAKCLETGDSVAIKKVLQDKR--------YKNRELQIMRLLN-HPNVVSLKHCFFSTTEKDELYL 210 (492)
Q Consensus 140 ~~~~~lG~G~fg~Vy~~~~~~~g~~vAiK~~~~~~~--------~~~~E~~il~~l~-h~nIv~l~~~~~~~~~~~~~~~ 210 (492)
.+...|++|+||+||.+.. .+..++.+.+..... ...+|+++|++|. |++|++++++. ..
T Consensus 5 ~~~~~l~~~~f~~v~~~~~--~~~k~~~~~l~~~~~~~~~~~~~l~~rE~~iL~~L~~~~~vP~ll~~~---------~~ 73 (218)
T PRK12274 5 AVNEPLKSDTFGRILLVRG--GERKFVRRDLSAAPWWLRGVAWWLARREALALRQLDGLPRTPRLLHWD---------GR 73 (218)
T ss_pred ccceeecCCCcceEEEeec--CCceeeecccccchhhhhhHHHHHHHHHHHHHHhcCCCCCCCEEEEEc---------CE
Confidence 3456899999999998764 677788776644322 4568999999996 58899987752 25
Q ss_pred EEEeeechhhHHHHhhhhhhcCCCcCHHHHHHHHHHHHHHHHHHHhhCCcccCCC-CCCceEEcCCCCcEEEeeecCccc
Q 011138 211 NLVLEYISETVYRVSKHYTRMNQHVPILYVQLYTYQICRALNYLHHVVGVCHRDI-KPQNLLVNPHTHQLKICDFGSAKM 289 (492)
Q Consensus 211 ~lV~E~~~~~l~~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~yLH~~~givHrDl-Kp~NILl~~~~~~vkL~DFG~a~~ 289 (492)
+++|||+.|..+.... +.. ...++.|++.+|.+||+ +||+|||| ||+|||++.++ .++|+|||+|..
T Consensus 74 ~lvmeyI~G~~L~~~~---------~~~-~~~~~~qi~~~L~~lH~-~GIvHrDL~kp~NILv~~~g-~i~LIDFG~A~~ 141 (218)
T PRK12274 74 HLDRSYLAGAAMYQRP---------PRG-DLAYFRAARRLLQQLHR-CGVAHNDLAKEANWLVQEDG-SPAVIDFQLAVR 141 (218)
T ss_pred EEEEeeecCccHHhhh---------hhh-hHHHHHHHHHHHHHHHH-CcCccCCCCCcceEEEcCCC-CEEEEECCCcee
Confidence 7999999986543110 001 13467899999999997 99999999 79999999877 799999999986
Q ss_pred cCCCCCC--------------ccceeccCccCchhhcCCCCCC-cchhhHHHHHHHHHHHhCCCCCCCCC
Q 011138 290 LVPGEPN--------------ISYICSRYYRAPELIFGATEYT-TAIDMWSIGCVLAELLLGQPLFPGES 344 (492)
Q Consensus 290 ~~~~~~~--------------~~~~gt~~y~aPE~~~~~~~~~-~~~DvwSlGvil~ell~G~~pf~~~~ 344 (492)
....... .-...++.|++|+...--...+ ...++++.|+-+|.++|+..++.+++
T Consensus 142 ~~~~~~~~r~L~~rDl~~llk~~~~y~~~~l~~~~~~~l~~~~~~~~~w~~~g~~~~~~~~~~~~~~~~~ 211 (218)
T PRK12274 142 GNPRARWMRLLAREDLRHLLKHKRMYCPAALTPVERRVLKRTSWIRELWFATGKPVYRFVTRRVLHWEDN 211 (218)
T ss_pred cCCcchHHHHHHHHHHHHHHHHHHhcCCCCCCHHHHhhhccchhHHHHHHHhcchHHHHHhccCCccccC
Confidence 5433321 0113578899998653222233 46788899999999999998886654
No 418
>PRK10359 lipopolysaccharide core biosynthesis protein; Provisional
Probab=99.87 E-value=4e-22 Score=185.48 Aligned_cols=170 Identities=14% Similarity=0.147 Sum_probs=125.5
Q ss_pred cceeEeeeeccCCceEEEEEEEcCCCCEEEEEEeccc----hhh---------HHHHHHHHHHcCCCCccccceeeeecc
Q 011138 137 ISYMAERVVGTGSFGVVFQAKCLETGDSVAIKKVLQD----KRY---------KNRELQIMRLLNHPNVVSLKHCFFSTT 203 (492)
Q Consensus 137 ~~y~~~~~lG~G~fg~Vy~~~~~~~g~~vAiK~~~~~----~~~---------~~~E~~il~~l~h~nIv~l~~~~~~~~ 203 (492)
.+|++.++||.|+||.||++.+ ++..+|||.+... ... .++|+..+.++.|++|..+.+++....
T Consensus 31 ~~y~~~~~l~~~~f~~v~l~~~--~~~~~iiKvf~~~~~~~~~~~~~f~~g~~~e~Ea~~l~rL~~~GI~~~~d~~~~~~ 108 (232)
T PRK10359 31 YNIKTIKVFRNIDDTKVSLIDT--DYGKYILKVFAPKVKRTERFLKSFVKGDYYENLIVQTDRVRSEGLASLNDFYLLAE 108 (232)
T ss_pred CceEEEEEecCCCceEEEEEec--CCCcEEEEEechhcCchHHHHHhhhhhHHHHHHHHHHHHHHHCCCCcceEeeeecc
Confidence 4699999999999999999755 5778999988532 111 468999999999999999998875433
Q ss_pred CC---CceEEEEEeeechhhHHHHhhhhhhcCCCcCHHHHHHHHHHHHHHHHHHHhhCCcccCCCCCCceEEcCCCCcEE
Q 011138 204 EK---DELYLNLVLEYISETVYRVSKHYTRMNQHVPILYVQLYTYQICRALNYLHHVVGVCHRDIKPQNLLVNPHTHQLK 280 (492)
Q Consensus 204 ~~---~~~~~~lV~E~~~~~l~~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~yLH~~~givHrDlKp~NILl~~~~~~vk 280 (492)
.. -....+|||||++|..+.... .++. ....+|+.+|..||+ .|++||||||+||++++++ ++
T Consensus 109 ~~~~~~~~~~~lvmEyi~G~tL~~~~-------~~~~----~~~~~i~~~l~~lH~-~gi~H~Dikp~Nili~~~g--i~ 174 (232)
T PRK10359 109 RKTLRYAHTYIMLIEYIEGVELNDMP-------EISE----DVKAKIKASIESLHQ-HGMVSGDPHKGNFIVSKNG--LR 174 (232)
T ss_pred cccccccCCeEEEEEEECCccHHHhh-------hccH----HHHHHHHHHHHHHHH-cCCccCCCChHHEEEeCCC--EE
Confidence 11 123478999999986443221 1222 245699999999997 9999999999999999766 99
Q ss_pred EeeecCccccCCCCCCccceeccCccCchhhcCCCCCCcchhhHHHHHHHHHHH
Q 011138 281 ICDFGSAKMLVPGEPNISYICSRYYRAPELIFGATEYTTAIDMWSIGCVLAELL 334 (492)
Q Consensus 281 L~DFG~a~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DvwSlGvil~ell 334 (492)
|+|||..+........ ...+.. ..|+.++|+|+||+++..+.
T Consensus 175 liDfg~~~~~~e~~a~-----------d~~vle-r~y~~~~di~~lg~~~~~~~ 216 (232)
T PRK10359 175 IIDLSGKRCTAQRKAK-----------DRIDLE-RHYGIKNEIKDLGYYLLIYK 216 (232)
T ss_pred EEECCCcccccchhhH-----------HHHHHH-hHhcccccccceeEeehHHH
Confidence 9999988654221111 002333 34778999999999987665
No 419
>KOG1240 consensus Protein kinase containing WD40 repeats [Signal transduction mechanisms]
Probab=99.87 E-value=1.2e-22 Score=215.75 Aligned_cols=241 Identities=27% Similarity=0.434 Sum_probs=170.3
Q ss_pred ceeEeeeeccCCceEEEEEEEcCCCCEEEEEEeccch------hhHH--HHHHHHHHcCCCCccccceeeeeccCCCceE
Q 011138 138 SYMAERVVGTGSFGVVFQAKCLETGDSVAIKKVLQDK------RYKN--RELQIMRLLNHPNVVSLKHCFFSTTEKDELY 209 (492)
Q Consensus 138 ~y~~~~~lG~G~fg~Vy~~~~~~~g~~vAiK~~~~~~------~~~~--~E~~il~~l~h~nIv~l~~~~~~~~~~~~~~ 209 (492)
.|...+.||++.|=+|.+|++. .|. |.||++.+.. .+.+ +|++ ...++|||.+.+..+. .....
T Consensus 24 e~~~~~~LGstRFlKv~r~k~~-eG~-vVvKVFvk~~p~~sL~~~~qrL~~ik-~~l~~~pn~lPfqk~~-----~t~kA 95 (1431)
T KOG1240|consen 24 ECHYVENLGSTRFLKVARAKDR-EGL-VVVKVFVKQDPTISLRPFKQRLEEIK-FALMKAPNCLPFQKVL-----VTDKA 95 (1431)
T ss_pred ceeeecccCchhhhhhhhccCC-Cce-EEEEEEeccCCCCCchHHHHHHHHHH-HHhhcCCcccchHHHH-----HhhHH
Confidence 4778889999999999999863 344 8899885543 1112 3444 6677899999876654 33345
Q ss_pred EEEEeeechhhHHHHhhhhhhcCCCcCHHHHHHHHHHHHHHHHHHHhhCCcccCCCCCCceEEcCCCCcEEEeeecCccc
Q 011138 210 LNLVLEYISETVYRVSKHYTRMNQHVPILYVQLYTYQICRALNYLHHVVGVCHRDIKPQNLLVNPHTHQLKICDFGSAKM 289 (492)
Q Consensus 210 ~~lV~E~~~~~l~~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~yLH~~~givHrDlKp~NILl~~~~~~vkL~DFG~a~~ 289 (492)
.|||-+|+...|++.+.. ..-+...+.+.|+.||+.||.-+|. .||+|||||.|||||+.-. =+.|+||..-+.
T Consensus 96 AylvRqyvkhnLyDRlST----RPFL~~iEKkWiaFQLL~al~qcH~-~gVcHGDIKsENILiTSWN-W~~LtDFAsFKP 169 (1431)
T KOG1240|consen 96 AYLVRQYVKHNLYDRLST----RPFLVLIEKKWIAFQLLKALSQCHK-LGVCHGDIKSENILITSWN-WLYLTDFASFKP 169 (1431)
T ss_pred HHHHHHHHhhhhhhhhcc----chHHHHHHHHHHHHHHHHHHHHHHH-cCccccccccceEEEeeec-hhhhhcccccCC
Confidence 789999999998875432 3345667788999999999999998 8999999999999998655 489999987654
Q ss_pred c--CCCCCC-cc-ce----eccCccCchhhcCCC----------CCCcchhhHHHHHHHHHHHh-CCCCCCCCChHHHHH
Q 011138 290 L--VPGEPN-IS-YI----CSRYYRAPELIFGAT----------EYTTAIDMWSIGCVLAELLL-GQPLFPGESGVDQLV 350 (492)
Q Consensus 290 ~--~~~~~~-~~-~~----gt~~y~aPE~~~~~~----------~~~~~~DvwSlGvil~ell~-G~~pf~~~~~~~~~~ 350 (492)
. +.+.+. .+ +. .-.+|+|||.+.... ..+++-||||+||+++||++ |++||.- .++.
T Consensus 170 tYLPeDNPadf~fFFDTSrRRtCYiAPERFv~~~~~~~~~q~~~~L~paMDIFS~GCViaELf~Eg~PlF~L----SQL~ 245 (1431)
T KOG1240|consen 170 TYLPEDNPADFTFFFDTSRRRTCYIAPERFVSALGKTSVGQDAPLLTPAMDIFSAGCVIAELFLEGRPLFTL----SQLL 245 (1431)
T ss_pred ccCCCCCcccceEEEecCCceeeecChHhhhccccccccCCcccccChhhhhhhhhHHHHHHHhcCCCcccH----HHHH
Confidence 3 122211 11 11 234699999985422 14678899999999999997 8999942 2222
Q ss_pred HHHHHhCCCCHHHHhhcCCCCcccCCCcccCCCcccccCCCCChhHhhhhccccccCCCCcCCHHHhhCC
Q 011138 351 EIIKILGTPTREEIKCMNPNYTEFKFPQIKAHPWHKIFHKRMPPEALDLVSRLLQYSPSLRCTALEACAH 420 (492)
Q Consensus 351 ~i~~~~g~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~Li~~~L~~dP~~R~t~~e~l~H 420 (492)
.....- ....+.. +.+--+..++.||..|++.||++|.+|++.|+-
T Consensus 246 aYr~~~-~~~~e~~-----------------------Le~Ied~~~Rnlil~Mi~rdPs~RlSAedyL~~ 291 (1431)
T KOG1240|consen 246 AYRSGN-ADDPEQL-----------------------LEKIEDVSLRNLILSMIQRDPSKRLSAEDYLQK 291 (1431)
T ss_pred hHhccC-ccCHHHH-----------------------HHhCcCccHHHHHHHHHccCchhccCHHHHHHh
Confidence 221110 0011100 001124568999999999999999999999975
No 420
>cd05145 RIO1_like RIO kinase family; RIO1, RIO3 and similar proteins, catalytic domain. The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO1 is present in archaea, bacteria and eukaryotes. In addition, RIO3 is present in multicellular eukaryotes. RIO1 is essential for survival and is required for 18S rRNA processing, proper cell cycle pro
Probab=99.86 E-value=3.3e-21 Score=177.28 Aligned_cols=136 Identities=18% Similarity=0.248 Sum_probs=104.7
Q ss_pred eeeeccCCceEEEEEEEcCCCCEEEEEEeccch------------------------------hhHHHHHHHHHHcCCCC
Q 011138 142 ERVVGTGSFGVVFQAKCLETGDSVAIKKVLQDK------------------------------RYKNRELQIMRLLNHPN 191 (492)
Q Consensus 142 ~~~lG~G~fg~Vy~~~~~~~g~~vAiK~~~~~~------------------------------~~~~~E~~il~~l~h~n 191 (492)
.+.||+|+||.||+|.+. +|+.||||++.... ....+|...+.++.|++
T Consensus 2 ~~~ig~G~~~~Vy~a~~~-~g~~vavKv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~ 80 (190)
T cd05145 2 NGCISTGKEANVYHARTG-DGEELAVKIYKTSTLSFKDRDKYIEGDPRFRSRYSKSNPRKLVFAWAEKEFRNLKRLYEAG 80 (190)
T ss_pred CceeecCCCcEEEEEEcC-CCCEEEEEEEEcCcceEeeHHHHhcCCcccccccccCCHHHHHHHHHHHHHHHHHHHHhCC
Confidence 457999999999999987 89999999885431 11246889999999998
Q ss_pred ccccceeeeeccCCCceEEEEEeeechhhHHHHhhhhhhcCCCcCHHHHHHHHHHHHHHHHHHHhhCCcccCCCCCCceE
Q 011138 192 VVSLKHCFFSTTEKDELYLNLVLEYISETVYRVSKHYTRMNQHVPILYVQLYTYQICRALNYLHHVVGVCHRDIKPQNLL 271 (492)
Q Consensus 192 Iv~l~~~~~~~~~~~~~~~~lV~E~~~~~l~~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~yLH~~~givHrDlKp~NIL 271 (492)
|.....+... . .+|||||++|+.+.... . ....++...+..++.|++.+|.+||+..||+||||||+|||
T Consensus 81 i~~p~~~~~~-----~--~~lVmE~~~g~~~~~~~--l-~~~~~~~~~~~~i~~~l~~~l~~lH~~~givHrDlkP~NIl 150 (190)
T cd05145 81 VPVPEPILLK-----K--NVLVMEFIGDDGSPAPR--L-KDVPLEEEEAEELYEQVVEQMRRLYQEAGLVHGDLSEYNIL 150 (190)
T ss_pred CCCceEEEec-----C--CEEEEEEecCCCchhhh--h-hhccCCHHHHHHHHHHHHHHHHHHHHhCCEecCCCChhhEE
Confidence 8655443321 1 36999999976221110 1 12456778889999999999999994379999999999999
Q ss_pred EcCCCCcEEEeeecCcccc
Q 011138 272 VNPHTHQLKICDFGSAKML 290 (492)
Q Consensus 272 l~~~~~~vkL~DFG~a~~~ 290 (492)
++ ++ .++|+|||+++..
T Consensus 151 l~-~~-~~~liDFG~a~~~ 167 (190)
T cd05145 151 YH-DG-KPYIIDVSQAVEL 167 (190)
T ss_pred EE-CC-CEEEEEcccceec
Confidence 98 55 7999999999765
No 421
>PRK10345 hypothetical protein; Provisional
Probab=99.82 E-value=1.6e-19 Score=167.37 Aligned_cols=133 Identities=18% Similarity=0.231 Sum_probs=98.9
Q ss_pred eeeeccCCceEEEEEEEcCCCCEEEEEEeccc----hhhHHHHHHHHHHc-----CCCCccccceeeeeccCCCceE-EE
Q 011138 142 ERVVGTGSFGVVFQAKCLETGDSVAIKKVLQD----KRYKNRELQIMRLL-----NHPNVVSLKHCFFSTTEKDELY-LN 211 (492)
Q Consensus 142 ~~~lG~G~fg~Vy~~~~~~~g~~vAiK~~~~~----~~~~~~E~~il~~l-----~h~nIv~l~~~~~~~~~~~~~~-~~ 211 (492)
.+.||+|+||.||. +..++.. +||++... .....+|+.+++.+ +||||+++++++.+.. +..+ +.
T Consensus 7 ~~~LG~G~~~~Vy~--hp~~~~k-~IKv~~~~~~~~~~~~~rEi~~l~~L~~~~~~h~nIvr~yg~~et~~--g~g~v~~ 81 (210)
T PRK10345 7 QSPLGTGRHRKCYA--HPEDAQR-CIKIVYHRGDGGDKEIRRELKYYAHLSRRLIDWSGIPRYYGTVETDC--GTGYVYD 81 (210)
T ss_pred cceecCCCceEEEE--CCCCcCe-EEEEEeccccchHHHHHHHHHHHHHhhccCCCCcccceeeEEEEeCC--CCeEEEE
Confidence 45799999999995 6667666 69987643 34567899999999 6799999999885532 2234 34
Q ss_pred EEeeech---hhHHHHhhhhhhcCCCcCHHHHHHHHHHHHHHH-HHHHhhCCcccCCCCCCceEEcCCC---CcEEEeee
Q 011138 212 LVLEYIS---ETVYRVSKHYTRMNQHVPILYVQLYTYQICRAL-NYLHHVVGVCHRDIKPQNLLVNPHT---HQLKICDF 284 (492)
Q Consensus 212 lV~E~~~---~~l~~~~~~~~~~~~~~~~~~~~~i~~qi~~aL-~yLH~~~givHrDlKp~NILl~~~~---~~vkL~DF 284 (492)
+||||++ ++|.+.+.. ..+++. ..++.|++.++ +|||+ ++||||||||+|||++..+ ..++|+||
T Consensus 82 ~I~e~~G~~~~tL~~~l~~-----~~~~e~--~~~~~~~L~~l~~yLh~-~~IvhrDlKp~NILl~~~~~~~~~~~LiDg 153 (210)
T PRK10345 82 VIADFDGKPSITLTEFAEQ-----CRYEED--VAQLRQLLKKLKRYLLD-NRIVTMELKPQNILCQRISESEVIPVVCDN 153 (210)
T ss_pred EEecCCCCcchhHHHHHHc-----ccccHh--HHHHHHHHHHHHHHHHH-CCEeecCCCHHHEEEeccCCCCCcEEEEEC
Confidence 7999955 466665532 234444 35678888888 99997 9999999999999997432 26999995
Q ss_pred cCc
Q 011138 285 GSA 287 (492)
Q Consensus 285 G~a 287 (492)
+-+
T Consensus 154 ~G~ 156 (210)
T PRK10345 154 IGE 156 (210)
T ss_pred CCC
Confidence 444
No 422
>KOG1033 consensus eIF-2alpha kinase PEK/EIF2AK3 [Translation, ribosomal structure and biogenesis]
Probab=99.82 E-value=1.4e-20 Score=187.97 Aligned_cols=181 Identities=28% Similarity=0.464 Sum_probs=134.3
Q ss_pred ceEEEEEeeechhhHHHHhhhhhhcCCCcCHHHHHHHHHHHHHHHHHHHhhCCcccCCCCCCceEEcCCCCcEEEeeecC
Q 011138 207 ELYLNLVLEYISETVYRVSKHYTRMNQHVPILYVQLYTYQICRALNYLHHVVGVCHRDIKPQNLLVNPHTHQLKICDFGS 286 (492)
Q Consensus 207 ~~~~~lV~E~~~~~l~~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~yLH~~~givHrDlKp~NILl~~~~~~vkL~DFG~ 286 (492)
..|+||.|++|....+.......+.....+....+.++.|+..|++| +|.+|||+||.||++..+. .+||.|||+
T Consensus 328 ~~~lyI~Mn~c~~~tledWl~rr~~~e~~s~s~~~~~~~q~~~~~~y----k~~ihrdlkp~nif~~~d~-q~kIgDFgl 402 (516)
T KOG1033|consen 328 KVYLYIQMNLCEKETLEDWLRRRRTGEERSLSLMLDIFKQIAPAVEY----KGLIHRDLKPSNIFFSDDD-QLKIGDFGL 402 (516)
T ss_pred ccchhhhhhhhhhhhHHHHhhCCCcccccchhHHHHHHHhhccchhh----ccchhhhccccccccccch-hhhhhhhhh
Confidence 44689999999965554444445556667788889999999999999 5999999999999998777 899999999
Q ss_pred ccccCCCC-------CCccceeccCccCchhhcCCCCCCcchhhHHHHHHHHHHHhC-CCCCCCCChHHHHHHHHHHhCC
Q 011138 287 AKMLVPGE-------PNISYICSRYYRAPELIFGATEYTTAIDMWSIGCVLAELLLG-QPLFPGESGVDQLVEIIKILGT 358 (492)
Q Consensus 287 a~~~~~~~-------~~~~~~gt~~y~aPE~~~~~~~~~~~~DvwSlGvil~ell~G-~~pf~~~~~~~~~~~i~~~~g~ 358 (492)
........ ..+...||..||+||.|.+.. |+.++||||||+||+||+.- ...|. .....-.
T Consensus 403 ~ts~~~~~~~~~~~a~~t~~~gt~~YmsPEQi~g~~-y~~kvdIyaLGlil~EL~~~f~T~~e------r~~t~~d---- 471 (516)
T KOG1033|consen 403 VTSQDKDETVAPAAASHTQQVGTLLYMSPEQIRGQQ-YSEKVDIYALGLILAELLIQFSTQFE------RIATLTD---- 471 (516)
T ss_pred eeecccCCcccchhhhhhhcccccccCCHHHHhhhh-hhhhcchhhHHHHHHHHHHHhccHHH------HHHhhhh----
Confidence 88765554 456789999999999998765 99999999999999999972 22221 1111000
Q ss_pred CCHHHHhhcCCCCcccCCCcccCCCcccccCCCCChhHhhhhccccccCCCCcCCHHHhhCCCCCC
Q 011138 359 PTREEIKCMNPNYTEFKFPQIKAHPWHKIFHKRMPPEALDLVSRLLQYSPSLRCTALEACAHPFFD 424 (492)
Q Consensus 359 p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~Li~~~L~~dP~~R~t~~e~l~Hp~f~ 424 (492)
+ ....+| ..+..+ -++-.+|+.+||...|.+||++.+.--|+|.+
T Consensus 472 -----~-------r~g~ip--------~~~~~d-~p~e~~ll~~lls~~p~~RP~~~~~~~~~~~~ 516 (516)
T KOG1033|consen 472 -----I-------RDGIIP--------PEFLQD-YPEEYTLLQQLLSPSPEERPSAIEVALHEFLQ 516 (516)
T ss_pred -----h-------hcCCCC--------hHHhhc-CcHHHHHHHHhcCCCcccCchHHHHhhhhhcC
Confidence 0 111122 111111 24457999999999999999888877787753
No 423
>KOG1166 consensus Mitotic checkpoint serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]
Probab=99.80 E-value=2.3e-19 Score=194.39 Aligned_cols=190 Identities=24% Similarity=0.382 Sum_probs=144.4
Q ss_pred ccceeEeeeeccCCceEEEEEEEcCCCCEEEEEEeccchh-hHHHHHHHHHHcC---CCCccccceeeeeccCCCceEEE
Q 011138 136 TISYMAERVVGTGSFGVVFQAKCLETGDSVAIKKVLQDKR-YKNRELQIMRLLN---HPNVVSLKHCFFSTTEKDELYLN 211 (492)
Q Consensus 136 ~~~y~~~~~lG~G~fg~Vy~~~~~~~g~~vAiK~~~~~~~-~~~~E~~il~~l~---h~nIv~l~~~~~~~~~~~~~~~~ 211 (492)
...|.|.+.||+|+||.||+|.... |+.||+|+-....- .+.-=.+++.+|+ -+-|..+..++...+. -+
T Consensus 697 ~~~~~I~~e~G~g~y~~vy~a~~~~-~~~~alK~e~P~~~WEfYI~~q~~~RLk~~~~~~~~~~~~a~~~~~~-----S~ 770 (974)
T KOG1166|consen 697 GEKFCISKEIGEGSYGSVYVATHSN-GKLVALKVEKPPNPWEFYICLQVMERLKPQMLPSIMHISSAHVFQNA-----SV 770 (974)
T ss_pred ceeEEEEeeeccccceEEEEeecCC-CcEEEEEeecCCCceeeeehHHHHHhhchhhhcchHHHHHHHccCCc-----ce
Confidence 3479999999999999999999766 99999997543211 1111123334444 2345555444432222 45
Q ss_pred EEeeech-hhHHHHhhhhhhcCCCcCHHHHHHHHHHHHHHHHHHHhhCCcccCCCCCCceEEcC------CCCcEEEeee
Q 011138 212 LVLEYIS-ETVYRVSKHYTRMNQHVPILYVQLYTYQICRALNYLHHVVGVCHRDIKPQNLLVNP------HTHQLKICDF 284 (492)
Q Consensus 212 lV~E~~~-~~l~~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~yLH~~~givHrDlKp~NILl~~------~~~~vkL~DF 284 (492)
||+||.+ |+|++++. ..+.+++..+..+..|++..++.||. .||||+||||+|+||.. +...++|+||
T Consensus 771 lv~ey~~~Gtlld~~N----~~~~m~e~lv~~~~~qml~ive~lH~-~~IIHgDiKPDNfll~~~~~~~~~~~~l~lIDf 845 (974)
T KOG1166|consen 771 LVSEYSPYGTLLDLIN----TNKVMDEYLVMFFSCQMLRIVEHLHA-MGIIHGDIKPDNFLLRREICADSDSKGLYLIDF 845 (974)
T ss_pred eeeeccccccHHHhhc----cCCCCCchhhhHHHHHHHHHHHHHHh-cceecccCCcceeEeecccCCCCcccceEEEec
Confidence 8999998 67777665 46778899999999999999999997 89999999999999942 2235999999
Q ss_pred cCcccc---CCCCCCccceeccCccCchhhcCCCCCCcchhhHHHHHHHHHHHhCC
Q 011138 285 GSAKML---VPGEPNISYICSRYYRAPELIFGATEYTTAIDMWSIGCVLAELLLGQ 337 (492)
Q Consensus 285 G~a~~~---~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DvwSlGvil~ell~G~ 337 (492)
|.+.-+ .++......++|-.+-.+|+..|. .++..+|.|.|..+++.||.|+
T Consensus 846 G~siDm~lfp~~~~F~~~~~td~f~C~EM~~gr-pWtYq~DyfGlAa~~h~mLFG~ 900 (974)
T KOG1166|consen 846 GRSIDMKLFPDGTKFKAVWHTDLFDCIEMREGR-PWTYQIDYFGLAATVHVMLFGK 900 (974)
T ss_pred ccceeeeEcCCCcEEeeeeccccchhHHHhcCC-CCchhhhhHHHHHHHHHHHHHH
Confidence 998544 444455667889999999999765 4999999999999999999996
No 424
>smart00090 RIO RIO-like kinase.
Probab=99.80 E-value=2.1e-19 Score=170.57 Aligned_cols=140 Identities=18% Similarity=0.152 Sum_probs=105.1
Q ss_pred ceeEeeeeccCCceEEEEEE-EcCCCCEEEEEEeccch----------------------------hhHHHHHHHHHHcC
Q 011138 138 SYMAERVVGTGSFGVVFQAK-CLETGDSVAIKKVLQDK----------------------------RYKNRELQIMRLLN 188 (492)
Q Consensus 138 ~y~~~~~lG~G~fg~Vy~~~-~~~~g~~vAiK~~~~~~----------------------------~~~~~E~~il~~l~ 188 (492)
.|.+.+.||+|+||.||+|. +..+|+.||||++.... ....+|+.+++++.
T Consensus 29 ~~~i~~~Lg~G~~g~Vy~a~~~~~~g~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~L~~L~ 108 (237)
T smart00090 29 LSAIGGCISTGKEANVYHALDFDGSGKERAVKIYRTGTLEFKRRDRYVDGDFRFKYRKINPRKLVRLWAEKEFRNLQRLY 108 (237)
T ss_pred hHHhCCeeccCcceeEEEEEecCCCCcEEEEEEEEcCcceecchhhhcccchhhccCCCCHHHHHHHHHHHHHHHHHHHH
Confidence 48889999999999999998 67799999999885321 11357999999997
Q ss_pred CCCccccceeeeeccCCCceEEEEEeeechhhHHHHhhhhhhcCCCcCHHHHHHHHHHHHHHHHHHHhhCC-cccCCCCC
Q 011138 189 HPNVVSLKHCFFSTTEKDELYLNLVLEYISETVYRVSKHYTRMNQHVPILYVQLYTYQICRALNYLHHVVG-VCHRDIKP 267 (492)
Q Consensus 189 h~nIv~l~~~~~~~~~~~~~~~~lV~E~~~~~l~~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~yLH~~~g-ivHrDlKp 267 (492)
+. ++.+...+.. . ..++||||++|..+.... .....+....+..++.||+.+|.+||+ +| |+||||||
T Consensus 109 ~~-~i~~p~~~~~-~-----~~~lV~E~~~g~~L~~~~---~~~~~~~~~~~~~i~~qi~~~l~~LH~-~g~iiH~Dikp 177 (237)
T smart00090 109 EA-GVPVPKPIAW-R-----RNVLVMEFIGGDGLPAPR---LKDVEPEEEEEFELYDDILEEMRKLYK-EGELVHGDLSE 177 (237)
T ss_pred hc-CCCCCeeeEe-c-----CceEEEEEecCCcccccc---cccCCcchHHHHHHHHHHHHHHHHHHh-cCCEEeCCCCh
Confidence 63 3333333311 1 136999999986443211 112344555677899999999999997 89 99999999
Q ss_pred CceEEcCCCCcEEEeeecCcccc
Q 011138 268 QNLLVNPHTHQLKICDFGSAKML 290 (492)
Q Consensus 268 ~NILl~~~~~~vkL~DFG~a~~~ 290 (492)
+||+++ ++ .++|+|||.+...
T Consensus 178 ~NIli~-~~-~i~LiDFg~a~~~ 198 (237)
T smart00090 178 YNILVH-DG-KVVIIDVSQSVEL 198 (237)
T ss_pred hhEEEE-CC-CEEEEEChhhhcc
Confidence 999999 55 7999999998743
No 425
>KOG0590 consensus Checkpoint kinase and related serine/threonine protein kinases [Cell cycle control, cell division, chromosome partitioning]
Probab=99.78 E-value=3.2e-20 Score=197.13 Aligned_cols=256 Identities=26% Similarity=0.316 Sum_probs=193.0
Q ss_pred ceeEeeeeccCCceEEEEEEEcC-CCCEEEEEEeccc---hhhH---HHHHHHHHHcC-CCCccccceeeeeccCCCceE
Q 011138 138 SYMAERVVGTGSFGVVFQAKCLE-TGDSVAIKKVLQD---KRYK---NRELQIMRLLN-HPNVVSLKHCFFSTTEKDELY 209 (492)
Q Consensus 138 ~y~~~~~lG~G~fg~Vy~~~~~~-~g~~vAiK~~~~~---~~~~---~~E~~il~~l~-h~nIv~l~~~~~~~~~~~~~~ 209 (492)
.|.+.+.||+|+|+.|-.+.... +...+|.|.+... .... ..|..+-+.+. |+|++++++.. .+..+
T Consensus 21 ~~~~~~~ig~gs~~~~~~~~~~~~~~~~~a~~~~s~~~~~~~~~~~i~~e~~~~~~~s~h~n~~~~~~~~-----~~~~~ 95 (601)
T KOG0590|consen 21 QYKLSRSIGKGSFSSSALASNSRDPESSSATKPISIPPKSEDSSEHIDTETDIQKKLSKHSNTVHMIEPS-----SSPRS 95 (601)
T ss_pred cccccccccccccchhhhhhhcCCCcceeeccCCCCCCCccchhhhcCccccccccccccccccccCCcc-----CCCcc
Confidence 48888889999999998887643 3445667765332 2222 34888888887 99999999887 55556
Q ss_pred EEEEeeechhhHHHHhhhh-hhcCCCcCHHHHHHHHHHHHHHHHHHH-hhCCcccCCCCCCceEEcCCCCcEEEeeecCc
Q 011138 210 LNLVLEYISETVYRVSKHY-TRMNQHVPILYVQLYTYQICRALNYLH-HVVGVCHRDIKPQNLLVNPHTHQLKICDFGSA 287 (492)
Q Consensus 210 ~~lV~E~~~~~l~~~~~~~-~~~~~~~~~~~~~~i~~qi~~aL~yLH-~~~givHrDlKp~NILl~~~~~~vkL~DFG~a 287 (492)
.+++++|..|+.+- ... .......+...+..++.|+..++.|+| . .++.||||||+|.+++..+..++++|||+|
T Consensus 96 ~~~~~~~s~g~~~f--~~i~~~~~~~~~~~~~~~~~~ql~s~l~~~H~~-~~~~h~~ikP~n~~l~~s~~~l~~~df~~A 172 (601)
T KOG0590|consen 96 YLLSLSYSDGGSLF--SKISHPDSTGTSSSSASRYLPQLNSGLSYLHPE-NGVTHRDIKPSNSLLDESGSALKIADFGLA 172 (601)
T ss_pred cccccCcccccccc--cccccCCccCCCCcchhhhhhhhccCccccCcc-cccccCCCCCccchhccCCCcccCCCchhh
Confidence 88999997765322 111 111225677788999999999999999 7 899999999999999876646999999999
Q ss_pred cccCC-CCC---Ccccee-ccCccCchhhcCCCCCCcchhhHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCCHH
Q 011138 288 KMLVP-GEP---NISYIC-SRYYRAPELIFGATEYTTAIDMWSIGCVLAELLLGQPLFPGESGVDQLVEIIKILGTPTRE 362 (492)
Q Consensus 288 ~~~~~-~~~---~~~~~g-t~~y~aPE~~~~~~~~~~~~DvwSlGvil~ell~G~~pf~~~~~~~~~~~i~~~~g~p~~~ 362 (492)
..... ... ....+| ++.|+|||...+........|+||+|+++.-+++|..||..........
T Consensus 173 t~~~~~~g~~~~~~~~~g~s~~y~a~E~~~~~~~~~~~~d~~S~g~~l~~~~~g~~p~~~~~~~~~~~------------ 240 (601)
T KOG0590|consen 173 TAYRNKNGAERSLKDRCGSSPPYGAPEHLSGKAYRGPSVDVWSLGIVLSAMLTGELPWDFPSRKDGRY------------ 240 (601)
T ss_pred ccccccCCcceeeecccCCCCCCCCcccccchhhcCCCcccccccccccccccCCCCccccccccccc------------
Confidence 87755 222 234678 9999999999876677889999999999999999999997654322110
Q ss_pred HHhhcCCCCcccCCCcccCCCcccccCCCCChhHhhhhccccccCCCCcCCHHHhhCCCCCCC
Q 011138 363 EIKCMNPNYTEFKFPQIKAHPWHKIFHKRMPPEALDLVSRLLQYSPSLRCTALEACAHPFFDD 425 (492)
Q Consensus 363 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~Li~~~L~~dP~~R~t~~e~l~Hp~f~~ 425 (492)
..+...+ .......+..++..+.+++.++|..+|..|.+..++..+||+..
T Consensus 241 -----------~~~~~~~-~~~~~~~~~~~~~~~~~~l~k~l~~~~~~r~s~~~~~~d~~~~~ 291 (601)
T KOG0590|consen 241 -----------SSWKSNK-GRFTQLPWNSISDQAHDLLHKILKENPSNRLSIEELKLDNWLSS 291 (601)
T ss_pred -----------eeecccc-cccccCccccCChhhhhcccccccCCchhccccccccccccccc
Confidence 0000100 11112234568899999999999999999999999999999998
No 426
>cd05144 RIO2_C RIO kinase family; RIO2, C-terminal catalytic domain. The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO2 is present in archaea and eukaryotes. It contains an N-terminal winged helix (wHTH) domain and a C-terminal RIO kinase catalytic domain. The wHTH domain is primarily seen in DNA-binding proteins, although some wHTH dom
Probab=99.75 E-value=6.9e-18 Score=156.29 Aligned_cols=131 Identities=18% Similarity=0.166 Sum_probs=100.4
Q ss_pred eeEeeeeccCCceEEEEEEEcCCCCEEEEEEeccch--------------------------hhHHHHHHHHHHcCCCC-
Q 011138 139 YMAERVVGTGSFGVVFQAKCLETGDSVAIKKVLQDK--------------------------RYKNRELQIMRLLNHPN- 191 (492)
Q Consensus 139 y~~~~~lG~G~fg~Vy~~~~~~~g~~vAiK~~~~~~--------------------------~~~~~E~~il~~l~h~n- 191 (492)
|.+.+.||+|+||.||++... +|+.||||++.... ....+|..++..+.|++
T Consensus 17 ~~~~~~i~~G~~g~Vy~~~~~-~g~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~i 95 (198)
T cd05144 17 ESLGNQIGVGKESDVYLALDP-DGNPVALKFHRLGRTSFRKVKRKRDYLGDRKHASWLYLSRLAAQKEFAALKALYEEGF 95 (198)
T ss_pred hhcCCccccCcceEEEEEEcC-CCCEEEEEEEecccchhhhhcchHHHHhccccchhHHHhHHHHHHHHHHHHHHHHcCC
Confidence 888899999999999999864 89999999864321 11346888899888874
Q ss_pred -ccccceeeeeccCCCceEEEEEeeechhhHHHHhhhhhhcCCCcCHHHHHHHHHHHHHHHHHHHhhCCcccCCCCCCce
Q 011138 192 -VVSLKHCFFSTTEKDELYLNLVLEYISETVYRVSKHYTRMNQHVPILYVQLYTYQICRALNYLHHVVGVCHRDIKPQNL 270 (492)
Q Consensus 192 -Iv~l~~~~~~~~~~~~~~~~lV~E~~~~~l~~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~yLH~~~givHrDlKp~NI 270 (492)
++..++. ...++||||++|..+..... ......++.+|+.++.++|+ .||+||||||+||
T Consensus 96 ~v~~~~~~---------~~~~lv~e~~~g~~L~~~~~---------~~~~~~~~~~i~~~l~~lh~-~gi~H~Dl~p~Ni 156 (198)
T cd05144 96 PVPKPIDW---------NRHAVVMEYIDGVELYRVRV---------LEDPEEVLDEILEEIVKAYK-HGIIHGDLSEFNI 156 (198)
T ss_pred CCCceeec---------CCceEEEEEeCCcchhhccc---------cccHHHHHHHHHHHHHHHHH-CCCCcCCCCcccE
Confidence 3333221 12479999999864432211 02356788899999999997 9999999999999
Q ss_pred EEcCCCCcEEEeeecCcccc
Q 011138 271 LVNPHTHQLKICDFGSAKML 290 (492)
Q Consensus 271 Ll~~~~~~vkL~DFG~a~~~ 290 (492)
+++.++ .++|+|||.+...
T Consensus 157 ll~~~~-~~~liDfg~~~~~ 175 (198)
T cd05144 157 LVDDDE-KIYIIDWPQMVST 175 (198)
T ss_pred EEcCCC-cEEEEECCccccC
Confidence 999877 8999999999654
No 427
>PRK14879 serine/threonine protein kinase; Provisional
Probab=99.73 E-value=2.5e-17 Score=153.92 Aligned_cols=130 Identities=21% Similarity=0.315 Sum_probs=100.2
Q ss_pred eeeccCCceEEEEEEEcCCCCEEEEEEeccch------------hhHHHHHHHHHHcCCCCccccceeeeeccCCCceEE
Q 011138 143 RVVGTGSFGVVFQAKCLETGDSVAIKKVLQDK------------RYKNRELQIMRLLNHPNVVSLKHCFFSTTEKDELYL 210 (492)
Q Consensus 143 ~~lG~G~fg~Vy~~~~~~~g~~vAiK~~~~~~------------~~~~~E~~il~~l~h~nIv~l~~~~~~~~~~~~~~~ 210 (492)
+.||+|++|.||+|.+ +|..|++|+..... ....+|+.++..+.|++|+....++... ...
T Consensus 2 ~~l~~G~~~~vy~~~~--~~~~~~vK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~i~~p~~~~~~~-----~~~ 74 (211)
T PRK14879 2 KLIKRGAEAEIYLGDF--LGIKAVIKWRIPKRYRHPELDERIRRERTRREARIMSRARKAGVNVPAVYFVDP-----ENF 74 (211)
T ss_pred cccccCceEEEEEEee--CCCceEEEEeCCcCCcChHHHHHHHHHHHHHHHHHHHHHHHCCCCCCeEEEEeC-----CCC
Confidence 4699999999999987 77889999754211 2245799999999999988776665332 236
Q ss_pred EEEeeechhhHHHHhhhhhhcCCCcCHHHHHHHHHHHHHHHHHHHhhCCcccCCCCCCceEEcCCCCcEEEeeecCccc
Q 011138 211 NLVLEYISETVYRVSKHYTRMNQHVPILYVQLYTYQICRALNYLHHVVGVCHRDIKPQNLLVNPHTHQLKICDFGSAKM 289 (492)
Q Consensus 211 ~lV~E~~~~~l~~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~yLH~~~givHrDlKp~NILl~~~~~~vkL~DFG~a~~ 289 (492)
++||||++|..+...... . .. ....++.+|+.+|.+||+ .|++|||++|.|||++ ++ .++|+|||++..
T Consensus 75 ~lv~e~~~G~~L~~~~~~---~---~~-~~~~i~~~i~~~l~~lH~-~~i~H~Dl~p~Nil~~-~~-~~~liDf~~a~~ 143 (211)
T PRK14879 75 IIVMEYIEGEPLKDLINS---N---GM-EELELSREIGRLVGKLHS-AGIIHGDLTTSNMILS-GG-KIYLIDFGLAEF 143 (211)
T ss_pred EEEEEEeCCcCHHHHHHh---c---cH-HHHHHHHHHHHHHHHHHh-CCcccCCCCcccEEEE-CC-CEEEEECCcccC
Confidence 799999987544322211 1 11 677889999999999997 9999999999999999 55 799999999875
No 428
>KOG0195 consensus Integrin-linked kinase [Signal transduction mechanisms]
Probab=99.72 E-value=6.9e-18 Score=154.95 Aligned_cols=239 Identities=16% Similarity=0.225 Sum_probs=168.7
Q ss_pred eeEeeeeccCCceEEEEEEEcCCCCEEEEEEeccc------hhhHHHHHHHHHHcCCCCccccceeeeeccCCCceEEEE
Q 011138 139 YMAERVVGTGSFGVVFQAKCLETGDSVAIKKVLQD------KRYKNRELQIMRLLNHPNVVSLKHCFFSTTEKDELYLNL 212 (492)
Q Consensus 139 y~~~~~lG~G~fg~Vy~~~~~~~g~~vAiK~~~~~------~~~~~~E~~il~~l~h~nIv~l~~~~~~~~~~~~~~~~l 212 (492)
..+.-+|.+..-|..|+|++.+ ..+.+|++... .+.+..|.-.|+-+.||||+.+++.+ .....+.+
T Consensus 192 lnl~tkl~e~hsgelwrgrwqg--ndivakil~vr~~t~risrdfneefp~lrifshpnilpvlgac-----nsppnlv~ 264 (448)
T KOG0195|consen 192 LNLITKLAESHSGELWRGRWQG--NDIVAKILNVREVTARISRDFNEEFPALRIFSHPNILPVLGAC-----NSPPNLVI 264 (448)
T ss_pred hhhhhhhccCCCcccccccccC--cchhhhhhhhhhcchhhcchhhhhCcceeeecCCchhhhhhhc-----cCCCCceE
Confidence 3445568889999999999854 34555655321 24456788889999999999999988 34445889
Q ss_pred Eeeech-hhHHHHhhhhhhcCCCcCHHHHHHHHHHHHHHHHHHHhhCCccc-CCCCCCceEEcCCCCcEEEeeecCcccc
Q 011138 213 VLEYIS-ETVYRVSKHYTRMNQHVPILYVQLYTYQICRALNYLHHVVGVCH-RDIKPQNLLVNPHTHQLKICDFGSAKML 290 (492)
Q Consensus 213 V~E~~~-~~l~~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~yLH~~~givH-rDlKp~NILl~~~~~~vkL~DFG~a~~~ 290 (492)
|..|++ |+|+..+-. ...--++-.++..++..|++|+.|||+...++- --|....++||.+. +.+|. .+-++..
T Consensus 265 isq~mp~gslynvlhe--~t~vvvd~sqav~faldiargmaflhslep~ipr~~lns~hvmidedl-taris-mad~kfs 340 (448)
T KOG0195|consen 265 ISQYMPFGSLYNVLHE--QTSVVVDHSQAVRFALDIARGMAFLHSLEPMIPRFYLNSKHVMIDEDL-TARIS-MADTKFS 340 (448)
T ss_pred eeeeccchHHHHHHhc--CccEEEecchHHHHHHHHHhhHHHHhhcchhhhhhhcccceEEecchh-hhhee-cccceee
Confidence 999999 556655432 222335566788899999999999997444443 46888899999876 55543 2211111
Q ss_pred CCCCCCccceeccCccCchhhcCCCC--CCcchhhHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCCHHHHhhcC
Q 011138 291 VPGEPNISYICSRYYRAPELIFGATE--YTTAIDMWSIGCVLAELLLGQPLFPGESGVDQLVEIIKILGTPTREEIKCMN 368 (492)
Q Consensus 291 ~~~~~~~~~~gt~~y~aPE~~~~~~~--~~~~~DvwSlGvil~ell~G~~pf~~~~~~~~~~~i~~~~g~p~~~~~~~~~ 368 (492)
-......-.|.||+||.+..... .-.++|+|||.+++|||.|...||..-++.+.-.+|.-
T Consensus 341 ---fqe~gr~y~pawmspealqrkped~n~raadmwsfaillwel~trevpfadlspmecgmkial-------------- 403 (448)
T KOG0195|consen 341 ---FQEVGRAYSPAWMSPEALQRKPEDLNIRAADMWSFAILLWELNTREVPFADLSPMECGMKIAL-------------- 403 (448)
T ss_pred ---eeccccccCcccCCHHHHhcCchhcchhhhhHHHHHHHHHHhhccccccccCCchhhhhhhhh--------------
Confidence 01112345788999999965432 34589999999999999999999988776654444321
Q ss_pred CCCcccCCCcccCCCcccccCCCCChhHhhhhccccccCCCCcCCHHHhh
Q 011138 369 PNYTEFKFPQIKAHPWHKIFHKRMPPEALDLVSRLLQYSPSLRCTALEAC 418 (492)
Q Consensus 369 ~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~Li~~~L~~dP~~R~t~~e~l 418 (492)
..+...+++.++..+..|+.-|+..||.+||..+.++
T Consensus 404 -------------eglrv~ippgis~hm~klm~icmnedpgkrpkfdmiv 440 (448)
T KOG0195|consen 404 -------------EGLRVHIPPGISRHMNKLMNICMNEDPGKRPKFDMIV 440 (448)
T ss_pred -------------ccccccCCCCccHHHHHHHHHHhcCCCCcCCCcceeh
Confidence 1111234567889999999999999999999987764
No 429
>TIGR03724 arch_bud32 Kae1-associated kinase Bud32. Members of this protein family are the Bud32 protein associated with Kae1 (kinase-associated endopeptidase 1) in the Archaea. In many Archaeal genomes, Kae1 and Bud32 are fused. The complex is homologous to the Kae1 and Bud32 subunits of the eukaryotic KEOPS complex, an apparently ancient protein kinase-containing molecular machine.
Probab=99.71 E-value=5.9e-17 Score=150.03 Aligned_cols=127 Identities=19% Similarity=0.301 Sum_probs=94.7
Q ss_pred eeccCCceEEEEEEEcCCCCEEEEEEeccc------------hhhHHHHHHHHHHcCCCCccccceeeeeccCCCceEEE
Q 011138 144 VVGTGSFGVVFQAKCLETGDSVAIKKVLQD------------KRYKNRELQIMRLLNHPNVVSLKHCFFSTTEKDELYLN 211 (492)
Q Consensus 144 ~lG~G~fg~Vy~~~~~~~g~~vAiK~~~~~------------~~~~~~E~~il~~l~h~nIv~l~~~~~~~~~~~~~~~~ 211 (492)
.||+|+||.||+|.. +|..|++|..... .....+|+++++.+.|+++.....++... ...+
T Consensus 1 ~ig~G~~~~vy~~~~--~~~~~viK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~i~~p~~~~~~~-----~~~~ 73 (199)
T TIGR03724 1 LIAKGAEAIIYLGDF--LGLKAVIKERVPKSYRHPELDERIRRERTRNEARLLSRARKAGVNTPVVYDVDP-----DNKT 73 (199)
T ss_pred CCCCCceEEEEEeec--CCccEEEEEecCCcCcCchHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEC-----CCCE
Confidence 389999999999984 6788999975321 12234799999999988766554444322 1257
Q ss_pred EEeeechhhHHHHhhhhhhcCCCcCHHHHHHHHHHHHHHHHHHHhhCCcccCCCCCCceEEcCCCCcEEEeeecCcccc
Q 011138 212 LVLEYISETVYRVSKHYTRMNQHVPILYVQLYTYQICRALNYLHHVVGVCHRDIKPQNLLVNPHTHQLKICDFGSAKML 290 (492)
Q Consensus 212 lV~E~~~~~l~~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~yLH~~~givHrDlKp~NILl~~~~~~vkL~DFG~a~~~ 290 (492)
+||||++|..+...... .. ..++.|++.+|.+||+ .|++|||++|.||+++ ++ .++++|||++...
T Consensus 74 lv~e~~~g~~l~~~~~~---~~-------~~~~~~i~~~l~~lH~-~gi~H~Dl~~~Nil~~-~~-~~~liDfg~a~~~ 139 (199)
T TIGR03724 74 IVMEYIEGKPLKDVIEE---GN-------DELLREIGRLVGKLHK-AGIVHGDLTTSNIIVR-DD-KLYLIDFGLGKYS 139 (199)
T ss_pred EEEEEECCccHHHHHhh---cH-------HHHHHHHHHHHHHHHH-CCeecCCCCcceEEEE-CC-cEEEEECCCCcCC
Confidence 99999987644322110 00 0678899999999997 9999999999999999 55 7999999998753
No 430
>KOG1023 consensus Natriuretic peptide receptor, guanylate cyclase [Signal transduction mechanisms]
Probab=99.70 E-value=4.3e-17 Score=165.98 Aligned_cols=206 Identities=25% Similarity=0.351 Sum_probs=146.1
Q ss_pred HHHcCCCCccccceeeeeccCCCceEEEEEeeechh-hHHHHhhhhhhcCCCcCHHHHHHHHHHHHHHHHHHHhhCCccc
Q 011138 184 MRLLNHPNVVSLKHCFFSTTEKDELYLNLVLEYISE-TVYRVSKHYTRMNQHVPILYVQLYTYQICRALNYLHHVVGVCH 262 (492)
Q Consensus 184 l~~l~h~nIv~l~~~~~~~~~~~~~~~~lV~E~~~~-~l~~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~yLH~~~givH 262 (492)
|+.+.|.|+.++++.++.. ..+++|.+||+. .+.+.+.. ....++......+++.|+.||.|||.+....|
T Consensus 1 l~~l~h~n~~~f~g~~~~~-----~~~~~i~~~c~rGsl~D~i~~---~~~~~d~~F~~s~~rdi~~Gl~ylh~s~i~~h 72 (484)
T KOG1023|consen 1 LRQLDHDNLNKFIGASVDG-----PEMIVIWEYCSRGSLLDILSN---EDIKLDYFFILSFIRDISKGLAYLHNSPIGYH 72 (484)
T ss_pred CcccchhhhhhheeeEecC-----CceEEEEeeecCccHHhHHhc---cccCccHHHHHHHHHHHHHHHHHHhcCcceee
Confidence 4678999999999998654 348899999995 45554433 34567777788889999999999997444499
Q ss_pred CCCCCCceEEcCCCCcEEEeeecCccccCCC---CCCccceeccCccCchhhcCCCC------CCcchhhHHHHHHHHHH
Q 011138 263 RDIKPQNLLVNPHTHQLKICDFGSAKMLVPG---EPNISYICSRYYRAPELIFGATE------YTTAIDMWSIGCVLAEL 333 (492)
Q Consensus 263 rDlKp~NILl~~~~~~vkL~DFG~a~~~~~~---~~~~~~~gt~~y~aPE~~~~~~~------~~~~~DvwSlGvil~el 333 (492)
+.|+..|+++|... .+||+|||+....... .......-...|.|||++.+... .+.+.|+||+|+++||+
T Consensus 73 g~l~s~nClvd~~w-~lklt~~Gl~~~~~~~~~~~~~~~~~~~~lw~aPellr~~~~~~~~~~~~~~gdiYs~~ii~~ei 151 (484)
T KOG1023|consen 73 GALKSSNCLVDSRW-VLKLTDFGLNSLLEETAEPEAHHPIRKALLWTAPELLRGALSQSLESALTQKGDIYSFGIIMYEI 151 (484)
T ss_pred eeeccccceeeeeE-EEEechhhhcccccccccccccchhHHHHhccCHHHhcccccccccccccccCCeehHHHHHHHH
Confidence 99999999999888 8999999998765321 11111223456999999966421 36679999999999999
Q ss_pred HhCCCCCCCCChHHH---HHHHHHHhCCCCHHHHhhcCCCCcccCCCcccCCCcccccCCCCChhHhhhhccccccCCCC
Q 011138 334 LLGQPLFPGESGVDQ---LVEIIKILGTPTREEIKCMNPNYTEFKFPQIKAHPWHKIFHKRMPPEALDLVSRLLQYSPSL 410 (492)
Q Consensus 334 l~G~~pf~~~~~~~~---~~~i~~~~g~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~Li~~~L~~dP~~ 410 (492)
++...||........ +...++..+.+ ..-|.+.. . ..+++++..++..|+..+|.+
T Consensus 152 ~~r~~~~~~~~~~~~~~eii~~~~~~~~~--------------~~rP~i~~------~-~e~~~~l~~l~~~cw~e~P~~ 210 (484)
T KOG1023|consen 152 LFRSGPFDLRNLVEDPDEIILRVKKGGSN--------------PFRPSIEL------L-NELPPELLLLVARCWEEIPEK 210 (484)
T ss_pred HhccCccccccccCChHHHHHHHHhcCCC--------------CcCcchhh------h-hhcchHHHHHHHHhcccChhh
Confidence 999999976332221 22211111110 00111100 0 135668999999999999999
Q ss_pred cCCHHHhhC
Q 011138 411 RCTALEACA 419 (492)
Q Consensus 411 R~t~~e~l~ 419 (492)
||+++++..
T Consensus 211 rPs~~~i~~ 219 (484)
T KOG1023|consen 211 RPSIEQIRS 219 (484)
T ss_pred CccHHHHHh
Confidence 999998854
No 431
>PRK09605 bifunctional UGMP family protein/serine/threonine protein kinase; Validated
Probab=99.69 E-value=1.4e-16 Score=169.44 Aligned_cols=132 Identities=17% Similarity=0.258 Sum_probs=98.5
Q ss_pred ceeEeeeeccCCceEEEEEEEcCCCCEEEEEEec-c---c--------hhhHHHHHHHHHHcCCCCccccceeeeeccCC
Q 011138 138 SYMAERVVGTGSFGVVFQAKCLETGDSVAIKKVL-Q---D--------KRYKNRELQIMRLLNHPNVVSLKHCFFSTTEK 205 (492)
Q Consensus 138 ~y~~~~~lG~G~fg~Vy~~~~~~~g~~vAiK~~~-~---~--------~~~~~~E~~il~~l~h~nIv~l~~~~~~~~~~ 205 (492)
.|...+.||+|+||+||++.+... .+++|+.. + . .....+|+++++.++|++|+..+.++...
T Consensus 334 ~~~~~~~iG~G~~g~Vy~~~~~~~--~~v~k~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~i~~p~~~~~~~--- 408 (535)
T PRK09605 334 RKIPDHLIGKGAEADIKKGEYLGR--DAVIKERVPKGYRHPELDERLRTERTRAEARLLSEARRAGVPTPVIYDVDP--- 408 (535)
T ss_pred ccCccceeccCCcEEEEEEeecCc--cceeEEEecccccchhHHHHHHHHHHHHHHHHHHhhcccCCCeeEEEEEeC---
Confidence 456788999999999999987443 34444321 1 0 12345799999999999998876655332
Q ss_pred CceEEEEEeeechhhHHHHhhhhhhcCCCcCHHHHHHHHHHHHHHHHHHHhhCCcccCCCCCCceEEcCCCCcEEEeeec
Q 011138 206 DELYLNLVLEYISETVYRVSKHYTRMNQHVPILYVQLYTYQICRALNYLHHVVGVCHRDIKPQNLLVNPHTHQLKICDFG 285 (492)
Q Consensus 206 ~~~~~~lV~E~~~~~l~~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~yLH~~~givHrDlKp~NILl~~~~~~vkL~DFG 285 (492)
...++||||++|..+..... ....++.||+.+|.|||+ .||+||||||+|||++ ++ .++|+|||
T Consensus 409 --~~~~lv~E~~~g~~L~~~l~-----------~~~~~~~~i~~~L~~lH~-~giiHrDlkp~NILl~-~~-~~~liDFG 472 (535)
T PRK09605 409 --EEKTIVMEYIGGKDLKDVLE-----------GNPELVRKVGEIVAKLHK-AGIVHGDLTTSNFIVR-DD-RLYLIDFG 472 (535)
T ss_pred --CCCEEEEEecCCCcHHHHHH-----------HHHHHHHHHHHHHHHHHh-CCCccCCCChHHEEEE-CC-cEEEEeCc
Confidence 23579999998764432111 246688999999999997 9999999999999994 44 69999999
Q ss_pred Ccccc
Q 011138 286 SAKML 290 (492)
Q Consensus 286 ~a~~~ 290 (492)
+++..
T Consensus 473 la~~~ 477 (535)
T PRK09605 473 LGKYS 477 (535)
T ss_pred ccccC
Confidence 99753
No 432
>cd05119 RIO RIO kinase family, catalytic domain. The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases present in archaea, bacteria and eukaryotes. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. RIO kinases contain a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. Most organisms contain at least two RIO kinases, RIO1 and RIO2. A third protein, RIO3, is present in multicellular eukaryotes. In yeast, RIO1 and RIO2 are essential for survival. They funct
Probab=99.67 E-value=2.7e-16 Score=144.06 Aligned_cols=131 Identities=22% Similarity=0.223 Sum_probs=91.2
Q ss_pred eeeeccCCceEEEEEEEcCCCCEEEEEEeccchhh-------H---------------------HHHHHHHHHcCCCC--
Q 011138 142 ERVVGTGSFGVVFQAKCLETGDSVAIKKVLQDKRY-------K---------------------NRELQIMRLLNHPN-- 191 (492)
Q Consensus 142 ~~~lG~G~fg~Vy~~~~~~~g~~vAiK~~~~~~~~-------~---------------------~~E~~il~~l~h~n-- 191 (492)
.+.||+|+||+||+|.+. +|+.||||++...... . ..|...+..+.+..
T Consensus 2 ~~~lg~G~~g~Vy~a~~~-~~~~vavKv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~~ 80 (187)
T cd05119 2 GGPIGTGKEADVYLALDG-DGEPVAVKIYRTGRTSFKKRKRYRTGDYRFGRKKSNWRYLSRLWAEKEFRNLKRLYEAGVP 80 (187)
T ss_pred CcccccccceeEEEEECC-CCCEEEEEEEecCccchhhhhhhhHHHHHhccCCcchhhhhhHHHHHHHHHHHHHHHcCCC
Confidence 457999999999999876 8999999987543211 0 23455555554332
Q ss_pred ccccceeeeeccCCCceEEEEEeeechhhHHH--HhhhhhhcCCCcCHHHHHHHHHHHHHHHHHHHhhCCcccCCCCCCc
Q 011138 192 VVSLKHCFFSTTEKDELYLNLVLEYISETVYR--VSKHYTRMNQHVPILYVQLYTYQICRALNYLHHVVGVCHRDIKPQN 269 (492)
Q Consensus 192 Iv~l~~~~~~~~~~~~~~~~lV~E~~~~~l~~--~~~~~~~~~~~~~~~~~~~i~~qi~~aL~yLH~~~givHrDlKp~N 269 (492)
+.+.+.+. ..++||||++++... .+.... . ...++.++.+++.++.++|..+||+||||||+|
T Consensus 81 ~~~~~~~~---------~~~lv~e~~~g~~~~~~~l~~~~-----~-~~~~~~~~~~~~~~l~~lh~~~~ivH~Dl~p~N 145 (187)
T cd05119 81 VPKPIDLN---------RHVLVMEFIGGDGIPAPRLKDVR-----L-LEDPEELYDQILELMRKLYREAGLVHGDLSEYN 145 (187)
T ss_pred CCceEecC---------CCEEEEEEeCCCCccChhhhhhh-----h-cccHHHHHHHHHHHHHHHhhccCcCcCCCChhh
Confidence 33332221 247999999983211 011100 0 145778899999999999943799999999999
Q ss_pred eEEcCCCCcEEEeeecCcccc
Q 011138 270 LLVNPHTHQLKICDFGSAKML 290 (492)
Q Consensus 270 ILl~~~~~~vkL~DFG~a~~~ 290 (492)
|+++ ++ .++|+|||.+...
T Consensus 146 ili~-~~-~~~liDfg~a~~~ 164 (187)
T cd05119 146 ILVD-DG-KVYIIDVPQAVEI 164 (187)
T ss_pred EEEE-CC-cEEEEECcccccc
Confidence 9999 55 7999999999754
No 433
>cd05120 APH_ChoK_like Aminoglycoside 3'-phosphotransferase (APH) and Choline Kinase (ChoK) family. The APH/ChoK family is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). The family is composed of APH, ChoK, ethanolamine kinase (ETNK), macrolide 2'-phosphotransferase (MPH2'), an unusual homoserine kinase, and uncharacterized proteins with similarity to the N-terminal domain of acyl-CoA dehydrogenase 10 (ACAD10). The members of this family catalyze the transfer of the gamma-phosphoryl group from ATP (or CTP) to small molecule substrates such as aminoglycosides, macrolides, choline, ethanolamine, and homoserine. Phosphorylation of the antibiotics, aminoglycosides and macrolides, leads to their inactivation and to bacterial antibiotic resistance. Phosphorylation of choline, ethanolamine, and homoserine serves
Probab=99.63 E-value=9.3e-16 Score=134.38 Aligned_cols=130 Identities=21% Similarity=0.269 Sum_probs=102.5
Q ss_pred eeeeccCCceEEEEEEEcCCCCEEEEEEeccch--hhHHHHHHHHHHcCC--CCccccceeeeeccCCCceEEEEEeeec
Q 011138 142 ERVVGTGSFGVVFQAKCLETGDSVAIKKVLQDK--RYKNRELQIMRLLNH--PNVVSLKHCFFSTTEKDELYLNLVLEYI 217 (492)
Q Consensus 142 ~~~lG~G~fg~Vy~~~~~~~g~~vAiK~~~~~~--~~~~~E~~il~~l~h--~nIv~l~~~~~~~~~~~~~~~~lV~E~~ 217 (492)
.+.||.|.++.||++... +..+++|...... ....+|+.+++.+.| .++++++.++ ......+++|||+
T Consensus 3 ~~~i~~g~~~~v~~~~~~--~~~~~iK~~~~~~~~~~~~~e~~~~~~l~~~~~~~p~~~~~~-----~~~~~~~~v~e~~ 75 (155)
T cd05120 3 IKLLKGGLTNRVYLLGTK--DEDYVLKINPSREKGADREREVAILQLLARKGLPVPKVLASG-----ESDGWSYLLMEWI 75 (155)
T ss_pred ceecccccccceEEEEec--CCeEEEEecCCCCchhHHHHHHHHHHHHHHcCCCCCeEEEEc-----CCCCccEEEEEec
Confidence 467999999999999974 3789999886554 356789999999987 4888887765 2334578999999
Q ss_pred hhhHHHHhhhhhhcCCCcCHHHHHHHHHHHHHHHHHHHhh--CCcccCCCCCCceEEcCCCCcEEEeeecCccc
Q 011138 218 SETVYRVSKHYTRMNQHVPILYVQLYTYQICRALNYLHHV--VGVCHRDIKPQNLLVNPHTHQLKICDFGSAKM 289 (492)
Q Consensus 218 ~~~l~~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~yLH~~--~givHrDlKp~NILl~~~~~~vkL~DFG~a~~ 289 (492)
.+..+... +......++.+++.+|.+||.. .+++|+||+|+||+++..+ .++++|||.+..
T Consensus 76 ~g~~~~~~----------~~~~~~~~~~~~~~~l~~lh~~~~~~i~H~Dl~~~Nil~~~~~-~~~l~Df~~~~~ 138 (155)
T cd05120 76 EGETLDEV----------SEEEKEDIAEQLAELLAKLHQLPLLVLCHGDLHPGNILVDDGK-ILGIIDWEYAGY 138 (155)
T ss_pred CCeecccC----------CHHHHHHHHHHHHHHHHHHhCCCceEEEecCCCcceEEEECCc-EEEEEecccccC
Confidence 87643211 4445667788999999999963 2699999999999999755 799999999864
No 434
>PRK01723 3-deoxy-D-manno-octulosonic-acid kinase; Reviewed
Probab=99.62 E-value=6.2e-15 Score=140.20 Aligned_cols=133 Identities=16% Similarity=0.253 Sum_probs=95.0
Q ss_pred eeec-cCCceEEEEEEEcCCCCEEEEEEeccc-----------------hhhHHHHHHHHHHcCCCCc--cccceeeeec
Q 011138 143 RVVG-TGSFGVVFQAKCLETGDSVAIKKVLQD-----------------KRYKNRELQIMRLLNHPNV--VSLKHCFFST 202 (492)
Q Consensus 143 ~~lG-~G~fg~Vy~~~~~~~g~~vAiK~~~~~-----------------~~~~~~E~~il~~l~h~nI--v~l~~~~~~~ 202 (492)
..|| .||.|+||.+.. .+..++||.+... .....+|+.++..|.|++| ++.+++....
T Consensus 37 ~~lg~~~g~gtv~~v~~--~~~~~vlk~~~r~~~i~kv~~~~~~~~~~~~~r~~rE~~ll~~L~~~gi~vP~pl~~~~~~ 114 (239)
T PRK01723 37 RVVGSAKGRGTTWFVQT--PGVNWVLRHYRRGGLIGKLSKDRYLFTGLERTRAFAEFRLLAQLYEAGLPVPRPIAARVVR 114 (239)
T ss_pred ceeecCCCCccEEEEEe--CCceEEEEEeeEcchHHhhhhhcccccchhhhHHHHHHHHHHHHHhCCCCCceeEeeeeee
Confidence 4577 788888888875 4788999977321 1123579999999998885 5666553322
Q ss_pred cCCCceEEEEEeeechh--hHHHHhhhhhhcCCCcCHHHHHHHHHHHHHHHHHHHhhCCcccCCCCCCceEEcCCCCcEE
Q 011138 203 TEKDELYLNLVLEYISE--TVYRVSKHYTRMNQHVPILYVQLYTYQICRALNYLHHVVGVCHRDIKPQNLLVNPHTHQLK 280 (492)
Q Consensus 203 ~~~~~~~~~lV~E~~~~--~l~~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~yLH~~~givHrDlKp~NILl~~~~~~vk 280 (492)
. ......++|||+++| ++...+. ...++.. .+.||+.+|.+||+ +||+||||||+|||++.++ .++
T Consensus 115 ~-~~~~~~~lV~e~l~G~~~L~~~l~-----~~~l~~~----~~~~i~~~l~~lH~-~GI~HrDlkp~NILv~~~~-~v~ 182 (239)
T PRK01723 115 H-GLFYRADILIERIEGARDLVALLQ-----EAPLSEE----QWQAIGQLIARFHD-AGVYHADLNAHNILLDPDG-KFW 182 (239)
T ss_pred c-CcceeeeEEEEecCCCCCHHHHHh-----cCCCCHH----HHHHHHHHHHHHHH-CCCCCCCCCchhEEEcCCC-CEE
Confidence 1 111123599999986 3443332 1234433 35689999999997 9999999999999999877 799
Q ss_pred EeeecCccc
Q 011138 281 ICDFGSAKM 289 (492)
Q Consensus 281 L~DFG~a~~ 289 (492)
|+|||.+..
T Consensus 183 LIDfg~~~~ 191 (239)
T PRK01723 183 LIDFDRGEL 191 (239)
T ss_pred EEECCCccc
Confidence 999999875
No 435
>KOG0606 consensus Microtubule-associated serine/threonine kinase and related proteins [Signal transduction mechanisms; General function prediction only]
Probab=99.57 E-value=1.3e-15 Score=162.74 Aligned_cols=269 Identities=25% Similarity=0.295 Sum_probs=188.4
Q ss_pred ccceeEeeeeccCCceEEEEEEEcCCCCEEEEEEeccch-------hhHHHHHHHHHHcCCCCccccceeeeeccCCCce
Q 011138 136 TISYMAERVVGTGSFGVVFQAKCLETGDSVAIKKVLQDK-------RYKNRELQIMRLLNHPNVVSLKHCFFSTTEKDEL 208 (492)
Q Consensus 136 ~~~y~~~~~lG~G~fg~Vy~~~~~~~g~~vAiK~~~~~~-------~~~~~E~~il~~l~h~nIv~l~~~~~~~~~~~~~ 208 (492)
.+.+.+.+-+-+|.++.++.+.-..+|...++|...... +...++-.++-.-.+|-++...-.| ....
T Consensus 803 ~d~~~i~~p~qS~sp~ss~p~~pa~sgh~~~~~v~~~ap~i~~~~~~s~r~~s~~~i~p~~P~v~~~~~s~-----~~rs 877 (1205)
T KOG0606|consen 803 PDGFEITKPSQSGSPSSSFPASPAGSGHTRPSKVHGLAPKIRTNDYESIRSKSNILITPRSPAVVRSFPSF-----PCRS 877 (1205)
T ss_pred CccceecccccCCCCcccccCCccccccccchhhhccchhhccccccccCCccCccccCCCCceecccCCC-----CCCC
Confidence 345777778999999999999887888777777543322 2222343343334456666543322 2233
Q ss_pred EEEEEeeechhh-HHHHhhhhhhcCCCcCHHHHHHHHHHHHHHHHHHHhhCCcccCCCCCCceEEcCCCCcEEEeeecCc
Q 011138 209 YLNLVLEYISET-VYRVSKHYTRMNQHVPILYVQLYTYQICRALNYLHHVVGVCHRDIKPQNLLVNPHTHQLKICDFGSA 287 (492)
Q Consensus 209 ~~~lV~E~~~~~-l~~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~yLH~~~givHrDlKp~NILl~~~~~~vkL~DFG~a 287 (492)
.++||++|++++ +...+. .....+..-++.+...+..+++|||. ..++|||++|.|+|+..++ ..+++|||..
T Consensus 878 P~~L~~~~~~~~~~~Skl~----~~~~~saepaRs~i~~~vqs~e~L~s-~~r~h~~~~p~~~l~~~~g-h~~l~~~~t~ 951 (1205)
T KOG0606|consen 878 PLPLVGHYLNGGDLPSKLH----NSGCLSAEPARSPILERVQSLESLHS-SLRKHRDLKPDSLLIAYDG-HRPLTDFGTL 951 (1205)
T ss_pred CcchhhHHhccCCchhhhh----cCCCcccccccchhHHHHhhhhcccc-chhhcccccccchhhcccC-CcccCccccc
Confidence 478999999763 332211 12345555677788899999999996 6799999999999999888 5899999843
Q ss_pred cccCC------------------------------C--CCCccceeccCccCchhhcCCCCCCcchhhHHHHHHHHHHHh
Q 011138 288 KMLVP------------------------------G--EPNISYICSRYYRAPELIFGATEYTTAIDMWSIGCVLAELLL 335 (492)
Q Consensus 288 ~~~~~------------------------------~--~~~~~~~gt~~y~aPE~~~~~~~~~~~~DvwSlGvil~ell~ 335 (492)
....- + .......||+.|.+||...+.. .+..+|+|++|++++|.++
T Consensus 952 ~~vg~~~p~~~~sg~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~t~~~laPe~~lg~~-hgs~ad~~~~g~~l~e~l~ 1030 (1205)
T KOG0606|consen 952 SKVGLIPPTTDLSGPSSSGTPRRLSRSERRPQLSADEARRKHAVVGTPDYLAPEILLGRR-HGSAADWWSSGVCLFEVLT 1030 (1205)
T ss_pred cccccccCcCCcccccccCccccccccccccccccchhhccccccCCCcccCCccccccc-CCCcchhhhhhhhhhhhhc
Confidence 22100 0 0112457899999999998766 6889999999999999999
Q ss_pred CCCCCCCCChHHHHHHHHHHhCCCCHHHHhhcCCCCcccCCCcccCCCcccccCCCCChhHhhhhccccccCCCCcCCHH
Q 011138 336 GQPLFPGESGVDQLVEIIKILGTPTREEIKCMNPNYTEFKFPQIKAHPWHKIFHKRMPPEALDLVSRLLQYSPSLRCTAL 415 (492)
Q Consensus 336 G~~pf~~~~~~~~~~~i~~~~g~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~Li~~~L~~dP~~R~t~~ 415 (492)
|.+||........+.+|... ....|. -+...+.++.+++.++|..+|.+|..+.
T Consensus 1031 g~pp~na~tpq~~f~ni~~~-----------------~~~~p~---------g~~~~s~~aq~~~~~ll~~~~~qr~~a~ 1084 (1205)
T KOG0606|consen 1031 GIPPFNAETPQQIFENILNR-----------------DIPWPE---------GPEEGSYEAQDLINRLLTEEPTQRLGAK 1084 (1205)
T ss_pred CCCCCCCcchhhhhhccccC-----------------CCCCCC---------CccccChhhhhhhhhhhccCchhccCcc
Confidence 99999998887777665441 111111 1235788999999999999999999988
Q ss_pred ---HhhCCCCCCCCCCCCCCCCCCCCCCCC
Q 011138 416 ---EACAHPFFDDLRDPNTCLPNGRPLPTL 442 (492)
Q Consensus 416 ---e~l~Hp~f~~~~~~~~~~~~~~~~~~~ 442 (492)
++-.||||+++....-..-+...+|..
T Consensus 1085 ~~~e~k~~~~~~~~~~~~l~~q~~~~~p~~ 1114 (1205)
T KOG0606|consen 1085 GAAEVKGHPFFQDVDWENLALQKAEFVPQP 1114 (1205)
T ss_pred cccccccCCccCCCCccccccccCccCCCC
Confidence 899999999876644333333344433
No 436
>KOG0601 consensus Cyclin-dependent kinase WEE1 [Cell cycle control, cell division, chromosome partitioning]
Probab=99.56 E-value=6.6e-15 Score=150.17 Aligned_cols=247 Identities=26% Similarity=0.296 Sum_probs=187.0
Q ss_pred ceeEeeeecc--CCceEEEEEEE--cCCCCEEEEEEec------cchhhHHHHHHHHHHcC-CCCccccceeeeeccCCC
Q 011138 138 SYMAERVVGT--GSFGVVFQAKC--LETGDSVAIKKVL------QDKRYKNRELQIMRLLN-HPNVVSLKHCFFSTTEKD 206 (492)
Q Consensus 138 ~y~~~~~lG~--G~fg~Vy~~~~--~~~g~~vAiK~~~------~~~~~~~~E~~il~~l~-h~nIv~l~~~~~~~~~~~ 206 (492)
.+.+...+|. |.+|.||.+.+ ..++..+|+|.-. .+.....+|..-.+.++ |+|.++.+..+ .+
T Consensus 115 ~~~~~~~~g~~~g~~~s~~~~~~~~~~s~~~~a~k~s~~p~s~p~~~~~k~~~~~s~~~i~~~~~~v~~~~~~-----e~ 189 (524)
T KOG0601|consen 115 RFPISSRTGSLPGSKGSVFKSRCTNSESPHKFAVKKSKIPFSPPLDSKRKLREFLSHHKIDSHENPVRDSPAW-----EG 189 (524)
T ss_pred hcccccccccCCCCCceeecccCCcccCCcccccccccCCCCCccccccccchhhcccccCccccccccCccc-----cc
Confidence 3556677999 99999999998 8899999999631 12233346777777775 99999977666 55
Q ss_pred ceEEEEEeeechhhHHHHhhhhhhcCCCcCHHHHHHHHHHHHH----HHHHHHhhCCcccCCCCCCceEEcCCCCcEEEe
Q 011138 207 ELYLNLVLEYISETVYRVSKHYTRMNQHVPILYVQLYTYQICR----ALNYLHHVVGVCHRDIKPQNLLVNPHTHQLKIC 282 (492)
Q Consensus 207 ~~~~~lV~E~~~~~l~~~~~~~~~~~~~~~~~~~~~i~~qi~~----aL~yLH~~~givHrDlKp~NILl~~~~~~vkL~ 282 (492)
...+|+-+|+|+..+... .......++...++.++.+... ||.++|. .+++|-|+||+||++..+....+++
T Consensus 190 ~~~lfiqtE~~~~sl~~~---~~~~~~~~p~~~l~~~~~~~~~~~~~al~~~hs-~~~~~~~~kp~~i~~~~~~~s~~~~ 265 (524)
T KOG0601|consen 190 SGILFIQTELCGESLQSY---CHTPCNFLPDNLLWNSLRDWLSRDVTALSHLHS-NNIVHDDLKPANIFTTSDWTSCKLT 265 (524)
T ss_pred CCcceeeeccccchhHHh---hhcccccCCchhhhhHHhhhhhcccccccccCC-CcccccccchhheecccccceeecC
Confidence 556889999999766543 2334455888889999999999 9999997 9999999999999999884479999
Q ss_pred eecCccccCCCCCCc------cceeccCccCchhhcCCCCCCcchhhHHHHHHHHHHHhCCCCCCCC--ChHHHHHHHHH
Q 011138 283 DFGSAKMLVPGEPNI------SYICSRYYRAPELIFGATEYTTAIDMWSIGCVLAELLLGQPLFPGE--SGVDQLVEIIK 354 (492)
Q Consensus 283 DFG~a~~~~~~~~~~------~~~gt~~y~aPE~~~~~~~~~~~~DvwSlGvil~ell~G~~pf~~~--~~~~~~~~i~~ 354 (492)
|||+...+.++.... ...|..-|++||+..+ -++...|++++|.++.+..+|..++... +...++..
T Consensus 266 df~~v~~i~~~~~~~~~~~~~r~~~~~~Y~~ke~~~~--l~~~~~di~sl~ev~l~~~l~~~~~~~g~~~~W~~~r~--- 340 (524)
T KOG0601|consen 266 DFGLVSKISDGNFSSVFKVSKRPEGDCIYAAKELLNG--LATFASDIFSLGEVILEAILGSHLPSVGKNSSWSQLRQ--- 340 (524)
T ss_pred CcceeEEccCCccccceeeeecCCCCceEeChhhhcc--ccchHhhhcchhhhhHhhHhhcccccCCCCCCcccccc---
Confidence 999998776554221 2256778999999854 3799999999999999999987666443 22111111
Q ss_pred HhCCCCHHHHhhcCCCCcccCCCcccCCCcccccCCCCChhHhhhhccccccCCCCcCCHHHhhCCCCCCC
Q 011138 355 ILGTPTREEIKCMNPNYTEFKFPQIKAHPWHKIFHKRMPPEALDLVSRLLQYSPSLRCTALEACAHPFFDD 425 (492)
Q Consensus 355 ~~g~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~Li~~~L~~dP~~R~t~~e~l~Hp~f~~ 425 (492)
.| ....|....+.++...+..|++.+|..|+++..+++|+++..
T Consensus 341 ---------------~~------------ip~e~~~~~s~~l~~~~~~~~d~~~~~~~~~q~~~~l~~i~s 384 (524)
T KOG0601|consen 341 ---------------GY------------IPLEFCEGGSSSLRSVTSQMLDEDPRLRLTAQILTALNVIHS 384 (524)
T ss_pred ---------------cc------------CchhhhcCcchhhhhHHHHhcCcchhhhhHHHHHhccccccc
Confidence 00 011122345667777999999999999999999999999874
No 437
>KOG1266 consensus Protein kinase [Signal transduction mechanisms]
Probab=99.44 E-value=3.6e-13 Score=127.42 Aligned_cols=242 Identities=19% Similarity=0.199 Sum_probs=159.6
Q ss_pred EEEEEEEcCCCCEEEEEEecc----ch--hhHHHH--HHHHHHcCCCCccccceeeeeccCCCceEEEEEeeech-hhHH
Q 011138 152 VVFQAKCLETGDSVAIKKVLQ----DK--RYKNRE--LQIMRLLNHPNVVSLKHCFFSTTEKDELYLNLVLEYIS-ETVY 222 (492)
Q Consensus 152 ~Vy~~~~~~~g~~vAiK~~~~----~~--~~~~~E--~~il~~l~h~nIv~l~~~~~~~~~~~~~~~~lV~E~~~-~~l~ 222 (492)
.||++-+...|.+|..-.+.. +. +...++ ..-|-++.|-|||+++.++.+....+.....++.||++ |.+.
T Consensus 81 ~v~lamd~e~g~evvwneVq~~~rK~~~~qeek~~~vFdnllqlvHsnlvkfH~yw~d~K~~e~~rviFiteymssgs~~ 160 (458)
T KOG1266|consen 81 DVYLAMDTEEGVEVVWNEVQFSERKNPKEQEEKRRAVFDNLLQLVHSNLVKFHKYWTDKKYEEKPRVIFITEYMSSGSLK 160 (458)
T ss_pred HHHHHhhhccCchhhHHHHHHHHhcChhhCHHHHHHHHHHHHHHHHHHHHHHHHhhcccccccccceEEEEecccchhHH
Confidence 467777777776655332211 10 111112 23345567999999999876666556677889999998 5666
Q ss_pred HHhhhhhhcCCCcCHHHHHHHHHHHHHHHHHHHhh-CCcccCCCCCCceEEcCCCCcEEEeeecCccccCCC------CC
Q 011138 223 RVSKHYTRMNQHVPILYVQLYTYQICRALNYLHHV-VGVCHRDIKPQNLLVNPHTHQLKICDFGSAKMLVPG------EP 295 (492)
Q Consensus 223 ~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~yLH~~-~givHrDlKp~NILl~~~~~~vkL~DFG~a~~~~~~------~~ 295 (492)
.+++...+....+.....++|+.||+.||.|||+. ..|+|+.+..+-|++..++ -+|+. -+.-....+. ..
T Consensus 161 ~fLkrt~~~~~a~~~~~wkkw~tqIlsal~yLhs~~PpiihgnlTc~tifiq~ng-LIkig-~~ap~s~h~s~~~~~~~E 238 (458)
T KOG1266|consen 161 QFLKRTKKNQKALFQKAWKKWCTQILSALSYLHSCDPPIIHGNLTCDTIFIQHNG-LIKIG-SVAPDSTHPSVNSTREAE 238 (458)
T ss_pred HHHHHHHHhhhhhhHHHHHHHHHHHHhhhhhhhccCCccccCCcchhheeecCCc-eEEec-ccCccccchhhhhhhHhh
Confidence 67777666677788888999999999999999952 3599999999999999776 56653 2211111110 01
Q ss_pred CccceeccCccCchhhcCCCCCCcchhhHHHHHHHHHHHhCCCC-CCCCChHHHHHHHHHHhCCCCHHHHhhcCCCCccc
Q 011138 296 NISYICSRYYRAPELIFGATEYTTAIDMWSIGCVLAELLLGQPL-FPGESGVDQLVEIIKILGTPTREEIKCMNPNYTEF 374 (492)
Q Consensus 296 ~~~~~gt~~y~aPE~~~~~~~~~~~~DvwSlGvil~ell~G~~p-f~~~~~~~~~~~i~~~~g~p~~~~~~~~~~~~~~~ 374 (492)
.....+-++|.+||.=. ....+.++|||+||+...+|..|..- -.+.+....-..|...+
T Consensus 239 k~~~~~~~g~~a~~sg~-~tn~~~a~dIy~fgmcAlemailEiq~tnseS~~~~ee~ia~~i------------------ 299 (458)
T KOG1266|consen 239 KSVNTSLPGFSAPESGT-TTNTTGASDIYKFGMCALEMAILEIQSTNSESKVEVEENIANVI------------------ 299 (458)
T ss_pred hhccccCCccccCCcCc-ccccccchhhhhhhHHHHHHHHheeccCCCcceeehhhhhhhhe------------------
Confidence 11234568899999642 23467789999999999999987633 22222211111111110
Q ss_pred CCCcccCCCcccccCCCCChhHhhhhccccccCCCCcCCHHHhhCCCCCCCCCC
Q 011138 375 KFPQIKAHPWHKIFHKRMPPEALDLVSRLLQYSPSLRCTALEACAHPFFDDLRD 428 (492)
Q Consensus 375 ~~~~~~~~~~~~~~~~~~s~~~~~Li~~~L~~dP~~R~t~~e~l~Hp~f~~~~~ 428 (492)
+ ..-...-+++|.+||+-.|..||++.+++.||.+-++..
T Consensus 300 -~-------------~len~lqr~~i~kcl~~eP~~rp~ar~llfHpllfeVhs 339 (458)
T KOG1266|consen 300 -I-------------GLENGLQRGSITKCLEGEPNGRPDARLLLFHPLLFEVHS 339 (458)
T ss_pred -e-------------eccCccccCcCcccccCCCCCCcchhhhhcCceeeecch
Confidence 0 001122468999999999999999999999999887654
No 438
>PRK04750 ubiB putative ubiquinone biosynthesis protein UbiB; Reviewed
Probab=99.43 E-value=2.2e-13 Score=142.33 Aligned_cols=142 Identities=17% Similarity=0.209 Sum_probs=87.8
Q ss_pred ceeEeeeeccCCceEEEEEEEcCCCCEEEEEEeccchh--------------------------------------hHH-
Q 011138 138 SYMAERVVGTGSFGVVFQAKCLETGDSVAIKKVLQDKR--------------------------------------YKN- 178 (492)
Q Consensus 138 ~y~~~~~lG~G~fg~Vy~~~~~~~g~~vAiK~~~~~~~--------------------------------------~~~- 178 (492)
.|.. +.||+|++|.||+|+.+.+|+.||||++..... ...
T Consensus 121 ~fd~-~PlasaSiaQVh~A~l~~~G~~VAVKV~rP~i~~~I~~Dl~~l~~~a~~l~~~~~~~~~l~~~~~v~e~~~~l~~ 199 (537)
T PRK04750 121 DFDI-KPLASASIAQVHFARLKDNGREVVVKVLRPDILPVIDADLALMYRLARWVERLLPDGRRLKPREVVAEFEKTLHD 199 (537)
T ss_pred hcCh-hhhcCCCccEEEEEEECCCCCEEEEEEeCcchHHHHHHHHHHHHHHHHHHHHhCcccccCCHHHHHHHHHHHHHH
Confidence 3555 679999999999999888899999998853310 011
Q ss_pred -----HHHHHHHHcC----CCCccccceeeeeccCCCceEEEEEeeechhhHHHHhhhhhhcC---CCcCHHHHHHHHHH
Q 011138 179 -----RELQIMRLLN----HPNVVSLKHCFFSTTEKDELYLNLVLEYISETVYRVSKHYTRMN---QHVPILYVQLYTYQ 246 (492)
Q Consensus 179 -----~E~~il~~l~----h~nIv~l~~~~~~~~~~~~~~~~lV~E~~~~~l~~~~~~~~~~~---~~~~~~~~~~i~~q 246 (492)
+|...+.++. +.+.+.+-.+|+.-. ..-+|||||+.|.-+.........+ ..+....+..++.|
T Consensus 200 ElD~~~Ea~N~~~~~~~f~~~~~v~VP~v~~d~s----t~~VLvmE~i~G~~l~d~~~l~~~g~d~~~la~~~v~~~~~Q 275 (537)
T PRK04750 200 ELDLMREAANASQLRRNFEDSDMLYVPEVYWDYC----SETVMVMERMYGIPVSDVAALRAAGTDMKLLAERGVEVFFTQ 275 (537)
T ss_pred hhCHHHHHHHHHHHHHHccCCCCeecceeecccC----CCceEEEeeecCccHHhHHHHHhcCCCHHHHHHHHHHHHHHH
Confidence 2332222221 333333333332111 1245999999986443222111111 12444445555555
Q ss_pred HHHHHHHHHhhCCcccCCCCCCceEEcCCC---CcEEEeeecCccccCC
Q 011138 247 ICRALNYLHHVVGVCHRDIKPQNLLVNPHT---HQLKICDFGSAKMLVP 292 (492)
Q Consensus 247 i~~aL~yLH~~~givHrDlKp~NILl~~~~---~~vkL~DFG~a~~~~~ 292 (492)
|+ . .|++|+|+||.||+++.++ ..++++|||++..+..
T Consensus 276 if-------~-~GffHaDpHPGNIlv~~~g~~~~~i~llDFGivg~l~~ 316 (537)
T PRK04750 276 VF-------R-DGFFHADMHPGNIFVSYDPPENPRYIALDFGIVGSLNK 316 (537)
T ss_pred HH-------h-CCeeeCCCChHHeEEecCCCCCCeEEEEecceEEECCH
Confidence 54 3 6999999999999998765 2699999999976643
No 439
>TIGR01982 UbiB 2-polyprenylphenol 6-hydroxylase. This model represents the enzyme (UbiB) which catalyzes the first hydroxylation step in the ubiquinone biosynthetic pathway in bacteria. It is believed that the reaction is 2-polyprenylphenol - 6-hydroxy-2-polyprenylphenol. This model finds hits primarily in the proteobacteria. The gene is also known as AarF in certain species.
Probab=99.39 E-value=1.7e-12 Score=134.15 Aligned_cols=137 Identities=20% Similarity=0.246 Sum_probs=87.6
Q ss_pred eeeccCCceEEEEEEEcCCCCEEEEEEeccch-hh-------------------------------------------HH
Q 011138 143 RVVGTGSFGVVFQAKCLETGDSVAIKKVLQDK-RY-------------------------------------------KN 178 (492)
Q Consensus 143 ~~lG~G~fg~Vy~~~~~~~g~~vAiK~~~~~~-~~-------------------------------------------~~ 178 (492)
+.||.|++|.||+|+. .+|+.||||+..... .. ..
T Consensus 123 ~plasaSigQVh~A~l-~~G~~VaVKv~rp~i~~~i~~Dl~~l~~~~~~~~~~~~~~~~~~~~~~~~e~~~~l~~Eldf~ 201 (437)
T TIGR01982 123 KPLAAASIAQVHRARL-VDGKEVAVKVLRPGIEKTIAADIALLYRLARIVERLSPDSRRLRPTEVVKEFEKTLRRELDLR 201 (437)
T ss_pred cceeeeehhheEEEEe-cCCCEEEEEeeCCCcHHHHHHHHHHHHHHHHHHHHhCccccccCHHHHHHHHHHHHHHHHCHH
Confidence 5699999999999985 579999999874321 00 11
Q ss_pred HHHHHHHHc----CCCCccccceeeeeccCCCceEEEEEeeechhhHHHHhhhhhhcCCCcCHHHHHHHHHHHHH-HHHH
Q 011138 179 RELQIMRLL----NHPNVVSLKHCFFSTTEKDELYLNLVLEYISETVYRVSKHYTRMNQHVPILYVQLYTYQICR-ALNY 253 (492)
Q Consensus 179 ~E~~il~~l----~h~nIv~l~~~~~~~~~~~~~~~~lV~E~~~~~l~~~~~~~~~~~~~~~~~~~~~i~~qi~~-aL~y 253 (492)
+|...+.++ .|.+-+.+-..|.... ..-+|||||++|..+........ .... ...++.+++. .+..
T Consensus 202 ~Ea~n~~~~~~~~~~~~~v~vP~v~~~~~----~~~vLvmE~i~G~~L~~~~~~~~--~~~~---~~~ia~~~~~~~l~q 272 (437)
T TIGR01982 202 REAANASELGENFKNDPGVYVPEVYWDRT----SERVLTMEWIDGIPLSDIAALDE--AGLD---RKALAENLARSFLNQ 272 (437)
T ss_pred HHHHHHHHHHHhcCCCCCEEeCCEehhhc----CCceEEEEeECCcccccHHHHHh--cCCC---HHHHHHHHHHHHHHH
Confidence 344444444 2333333333332211 12469999999864432221111 1111 2345555555 4678
Q ss_pred HHhhCCcccCCCCCCceEEcCCCCcEEEeeecCccccC
Q 011138 254 LHHVVGVCHRDIKPQNLLVNPHTHQLKICDFGSAKMLV 291 (492)
Q Consensus 254 LH~~~givHrDlKp~NILl~~~~~~vkL~DFG~a~~~~ 291 (492)
+|. .|++|+|+||.||+++.++ .++|+|||++..+.
T Consensus 273 l~~-~g~~H~D~hPgNilv~~~g-~i~liDfG~~~~l~ 308 (437)
T TIGR01982 273 VLR-DGFFHADLHPGNIFVLKDG-KIIALDFGIVGRLS 308 (437)
T ss_pred HHh-CCceeCCCCcccEEECCCC-cEEEEeCCCeeECC
Confidence 897 8999999999999998887 79999999997653
No 440
>KOG1243 consensus Protein kinase [General function prediction only]
Probab=99.38 E-value=3.6e-12 Score=131.58 Aligned_cols=180 Identities=22% Similarity=0.264 Sum_probs=127.0
Q ss_pred eeEeeeeccCCceEEEEEEEcCCCCEEEEEEeccch----hhHHHHHHHHHHcCCCCccccceeeeeccCCCceEEEEEe
Q 011138 139 YMAERVVGTGSFGVVFQAKCLETGDSVAIKKVLQDK----RYKNRELQIMRLLNHPNVVSLKHCFFSTTEKDELYLNLVL 214 (492)
Q Consensus 139 y~~~~~lG~G~fg~Vy~~~~~~~g~~vAiK~~~~~~----~~~~~E~~il~~l~h~nIv~l~~~~~~~~~~~~~~~~lV~ 214 (492)
|.+ ...+-++.+..-.|..+.++.+|.|....... ....+-++-|+.++||||+++++.+ +....+|||+
T Consensus 15 Y~l-e~~~~~~~a~~~~~t~k~~~~~vsVF~~~~~~~~~~~~~~~A~k~lKtlRHP~Il~yL~t~-----e~~~~~ylvT 88 (690)
T KOG1243|consen 15 YDL-EETAFSSEALWPDGTRKADGGPVSVFVYKRSNGEVTELAKRAVKRLKTLRHPNILSYLDTT-----EEEGTLYLVT 88 (690)
T ss_pred ccc-ccccCCCcccccccceeccCCceEEEEEeCCCchhhHHHHHHHHHhhhccCchhhhhhhhh-----cccCceEEEe
Confidence 555 34444444433346667888999888775433 2345778889999999999999988 4444699999
Q ss_pred eechhhHHHHhhhhhhcCCCcCHHHHHHHHHHHHHHHHHHHhhCCcccCCCCCCceEEcCCCCcEEEeeecCccccCCCC
Q 011138 215 EYISETVYRVSKHYTRMNQHVPILYVQLYTYQICRALNYLHHVVGVCHRDIKPQNLLVNPHTHQLKICDFGSAKMLVPGE 294 (492)
Q Consensus 215 E~~~~~l~~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~yLH~~~givHrDlKp~NILl~~~~~~vkL~DFG~a~~~~~~~ 294 (492)
|-+..--.. ++. +....+...+.||+.||.|||+..+++|++|.-..|+|+..| ..||++|-++.....-.
T Consensus 89 ErV~Pl~~~-lk~-------l~~~~v~~Gl~qIl~AL~FL~~d~~lvHgNv~~~SVfVn~~G-eWkLggle~v~~~~~~~ 159 (690)
T KOG1243|consen 89 ERVRPLETV-LKE-------LGKEEVCLGLFQILAALSFLNDDCNLVHGNVCKDSVFVNESG-EWKLGGLELVSKASGFN 159 (690)
T ss_pred eccccHHHH-HHH-------hHHHHHHHHHHHHHHHHHHHhccCCeeeccEeeeeEEEcCCC-cEEEeeeEEEeccccCC
Confidence 998742111 111 224567778899999999998558999999999999999998 79999999875442221
Q ss_pred C-CccceeccCccCchhhcCCCCCCcchhhHHHHHHHHHHHhC
Q 011138 295 P-NISYICSRYYRAPELIFGATEYTTAIDMWSIGCVLAELLLG 336 (492)
Q Consensus 295 ~-~~~~~gt~~y~aPE~~~~~~~~~~~~DvwSlGvil~ell~G 336 (492)
. .....---.|..|+.+... .-..|.|-|||++++++.|
T Consensus 160 ~~~~~~~~~~s~~~P~~~~~s---~~s~D~~~Lg~li~el~ng 199 (690)
T KOG1243|consen 160 APAKSLYLIESFDDPEEIDPS---EWSIDSWGLGCLIEELFNG 199 (690)
T ss_pred cccccchhhhcccChhhcCcc---ccchhhhhHHHHHHHHhCc
Confidence 1 1111112236777765221 2467999999999999999
No 441
>cd05151 ChoK Choline Kinase (ChoK). The ChoK subfamily is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). It is composed of bacterial and eukaryotic choline kinases, as well as eukaryotic ethanolamine kinase. ChoK catalyzes the transfer of the gamma-phosphoryl group from ATP (or CTP) to its substrate, choline, producing phosphorylcholine (PCho), a precursor to the biosynthesis of two major membrane phospholipids, phosphatidylcholine (PC), and sphingomyelin (SM). Although choline is the preferred substrate, ChoK also shows substantial activity towards ethanolamine and its N-methylated derivatives. Bacterial ChoK is also referred to as licA protein. ETNK catalyzes the transfer of the gamma-phosphoryl group from CTP to ethanolamine (Etn), the first step in the CDP-Etn pathway for the formation of the major ph
Probab=99.35 E-value=3.6e-12 Score=114.62 Aligned_cols=123 Identities=16% Similarity=0.212 Sum_probs=90.2
Q ss_pred eeeccCCceEEEEEEEcCCCCEEEEEEeccch---hhHHHHHHHHHHcCCCCcc-ccceeeeeccCCCceEEEEEeeech
Q 011138 143 RVVGTGSFGVVFQAKCLETGDSVAIKKVLQDK---RYKNRELQIMRLLNHPNVV-SLKHCFFSTTEKDELYLNLVLEYIS 218 (492)
Q Consensus 143 ~~lG~G~fg~Vy~~~~~~~g~~vAiK~~~~~~---~~~~~E~~il~~l~h~nIv-~l~~~~~~~~~~~~~~~~lV~E~~~ 218 (492)
+.|+.|.++.||++.. .|..|++|...... ...++|+.+++.+.+.+++ +++.+. ... .++||||++
T Consensus 4 ~~l~~G~~~~vy~~~~--~~~~~~lK~~~~~~~~~~~~~~E~~~l~~l~~~~~~P~~~~~~-----~~~--~~lv~e~i~ 74 (170)
T cd05151 4 SPLKGGMTNKNYRVEV--ANKKYVVRIPGNGTELLINRENEAENSKLAAEAGIGPKLYYFD-----PET--GVLITEFIE 74 (170)
T ss_pred eecCCcccCceEEEEE--CCeEEEEEeCCCCcccccCHHHHHHHHHHHHHhCCCCceEEEe-----CCC--CeEEEEecC
Confidence 4689999999999986 47889999875543 3456899999998765544 444332 111 358999999
Q ss_pred hhHHHHhhhhhhcCCCcCHHHHHHHHHHHHHHHHHHHhhCCc-----ccCCCCCCceEEcCCCCcEEEeeecCcc
Q 011138 219 ETVYRVSKHYTRMNQHVPILYVQLYTYQICRALNYLHHVVGV-----CHRDIKPQNLLVNPHTHQLKICDFGSAK 288 (492)
Q Consensus 219 ~~l~~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~yLH~~~gi-----vHrDlKp~NILl~~~~~~vkL~DFG~a~ 288 (492)
|..+... . .....++.+++.+|..||. .++ +|+|++|.||+++ ++ .++++|||.+.
T Consensus 75 G~~l~~~--------~---~~~~~~~~~l~~~l~~LH~-~~~~~~~~~HgD~~~~Nil~~-~~-~~~liDf~~a~ 135 (170)
T cd05151 75 GSELLTE--------D---FSDPENLEKIAKLLKKLHS-SPLPDLVPCHNDLLPGNFLLD-DG-RLWLIDWEYAG 135 (170)
T ss_pred CCccccc--------c---ccCHHHHHHHHHHHHHHhC-CCCCCceeecCCCCcCcEEEE-CC-eEEEEeccccc
Confidence 8643211 0 1123456799999999997 775 9999999999999 44 69999999875
No 442
>cd05146 RIO3_euk RIO kinase family; eukaryotic RIO3, catalytic domain. The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO3 is present only in multicellular eukaryotes. Its function is still unknown.
Probab=99.33 E-value=6e-12 Score=114.85 Aligned_cols=133 Identities=17% Similarity=0.178 Sum_probs=92.8
Q ss_pred eeeccCCceEEEEEEEcC------CCCEEEEEEecc--------------ch------------hh----HHHHHHHHHH
Q 011138 143 RVVGTGSFGVVFQAKCLE------TGDSVAIKKVLQ--------------DK------------RY----KNRELQIMRL 186 (492)
Q Consensus 143 ~~lG~G~fg~Vy~~~~~~------~g~~vAiK~~~~--------------~~------------~~----~~~E~~il~~ 186 (492)
..||.|--+.||.|.... .+..+|||+.+. +. .. .++|...|++
T Consensus 3 g~i~~GKEa~V~~~~~~~~~~~~~~~~~~avKi~r~~~~~Fk~~~~y~~~~~rf~~~~~k~~~~~~~~~wa~kE~r~L~r 82 (197)
T cd05146 3 GCISTGKESVVLHANGGSNETEQVIPTECAIKVFKTTLNEFKNRDKYIKDDYRFKDRFSKLNPRKIIRMWAEKEMHNLKR 82 (197)
T ss_pred CccccCcceEEEEEecCcccccccCCceEEEEEEeccceeEcChhhhccCCcccccCcCCCCHHHHHHHHHHHHHHHHHH
Confidence 368999999999998643 357899997621 10 01 1269999998
Q ss_pred cCC--CCccccceeeeeccCCCceEEEEEeeechhhHHHHhhhhhhcCCCcCHHHHHHHHHHHHHHHHHH-HhhCCcccC
Q 011138 187 LNH--PNVVSLKHCFFSTTEKDELYLNLVLEYISETVYRVSKHYTRMNQHVPILYVQLYTYQICRALNYL-HHVVGVCHR 263 (492)
Q Consensus 187 l~h--~nIv~l~~~~~~~~~~~~~~~~lV~E~~~~~l~~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~yL-H~~~givHr 263 (492)
+.. -++.+++++. .-+|||||++++.+.... . ....++...+..+..|++.+|..| |+ .||||+
T Consensus 83 l~~~Gv~vP~pi~~~---------~~~lvME~Ig~~~~~~~~--L-kd~~~~~~~~~~i~~~i~~~l~~l~H~-~glVHG 149 (197)
T cd05146 83 MQKAGIPCPEVVVLK---------KHVLVMSFIGDDQVPAPK--L-KDAKLNDEEMKNAYYQVLSMMKQLYKE-CNLVHA 149 (197)
T ss_pred HHHcCCCCCeEEEec---------CCEEEEEEcCCCCccchh--h-hccccCHHHHHHHHHHHHHHHHHHHHh-CCeecC
Confidence 863 4555665532 145899999864211000 0 012234455667788999999999 86 899999
Q ss_pred CCCCCceEEcCCCCcEEEeeecCcccc
Q 011138 264 DIKPQNLLVNPHTHQLKICDFGSAKML 290 (492)
Q Consensus 264 DlKp~NILl~~~~~~vkL~DFG~a~~~ 290 (492)
||++.|||++. + .+.|+|||.+...
T Consensus 150 DLs~~NIL~~~-~-~v~iIDF~qav~~ 174 (197)
T cd05146 150 DLSEYNMLWHD-G-KVWFIDVSQSVEP 174 (197)
T ss_pred CCCHHHEEEEC-C-cEEEEECCCceeC
Confidence 99999999974 4 6999999988644
No 443
>KOG0601 consensus Cyclin-dependent kinase WEE1 [Cell cycle control, cell division, chromosome partitioning]
Probab=99.31 E-value=1.5e-12 Score=133.11 Aligned_cols=248 Identities=20% Similarity=0.188 Sum_probs=173.4
Q ss_pred ccceeEeeeeccCCceEEEEEEEc-CCCCEEEEEEeccchh------hHHHHHHHHHHcC-CCCccccceeeeeccCCCc
Q 011138 136 TISYMAERVVGTGSFGVVFQAKCL-ETGDSVAIKKVLQDKR------YKNRELQIMRLLN-HPNVVSLKHCFFSTTEKDE 207 (492)
Q Consensus 136 ~~~y~~~~~lG~G~fg~Vy~~~~~-~~g~~vAiK~~~~~~~------~~~~E~~il~~l~-h~nIv~l~~~~~~~~~~~~ 207 (492)
..+|..+..||.|.|+.|+.+... .++..|++|.+.+... .--.|+-+...+. |.+++.++..+...
T Consensus 264 ~~df~~v~~i~~~~~~~~~~~~~r~~~~~~Y~~ke~~~~l~~~~~di~sl~ev~l~~~l~~~~~~~g~~~~W~~~----- 338 (524)
T KOG0601|consen 264 LTDFGLVSKISDGNFSSVFKVSKRPEGDCIYAAKELLNGLATFASDIFSLGEVILEAILGSHLPSVGKNSSWSQL----- 338 (524)
T ss_pred cCCcceeEEccCCccccceeeeecCCCCceEeChhhhccccchHhhhcchhhhhHhhHhhcccccCCCCCCcccc-----
Confidence 346888899999999999988755 6788899997644322 2224666666554 88888877665322
Q ss_pred eEEEEEeeechhhHHHHhhhhhhcCCCcCHHHHHHHHHHHHHHHHHHHhhCCcccCCCCCCceEEcCCCCcEEEeeecCc
Q 011138 208 LYLNLVLEYISETVYRVSKHYTRMNQHVPILYVQLYTYQICRALNYLHHVVGVCHRDIKPQNLLVNPHTHQLKICDFGSA 287 (492)
Q Consensus 208 ~~~~lV~E~~~~~l~~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~yLH~~~givHrDlKp~NILl~~~~~~vkL~DFG~a 287 (492)
...|+=.|||.++...+.. .....+.+...+.+..|++.++.++|+ +.++|+|+||+||++..++...++.|||++
T Consensus 339 r~~~ip~e~~~~~s~~l~~---~~~~~~d~~~~~~~~~q~~~~l~~i~s-~~~~~~d~~psni~i~~~~~~~~~~~~~~~ 414 (524)
T KOG0601|consen 339 RQGYIPLEFCEGGSSSLRS---VTSQMLDEDPRLRLTAQILTALNVIHS-KLFVHLDVKPSNILISNDGFFSKLGDFGCW 414 (524)
T ss_pred ccccCchhhhcCcchhhhh---HHHHhcCcchhhhhHHHHHhccccccc-hhhhcccccccceeeccchhhhhccccccc
Confidence 2255889999876554332 233456677788899999999999997 899999999999999876447899999998
Q ss_pred cccCCCCCCccceeccCcc-CchhhcCCCCCCcchhhHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCCHHHHhh
Q 011138 288 KMLVPGEPNISYICSRYYR-APELIFGATEYTTAIDMWSIGCVLAELLLGQPLFPGESGVDQLVEIIKILGTPTREEIKC 366 (492)
Q Consensus 288 ~~~~~~~~~~~~~gt~~y~-aPE~~~~~~~~~~~~DvwSlGvil~ell~G~~pf~~~~~~~~~~~i~~~~g~p~~~~~~~ 366 (492)
+.+ .-........-.++ .+|++.....+..+.|++|||..+++.++|.+.-...... ..|..
T Consensus 415 t~~--~~~~~~~~~~~r~~p~~~~~~e~~~~~~~~~~~sl~~~~~e~~~~~~ls~~~~~~---~~i~~------------ 477 (524)
T KOG0601|consen 415 TRL--AFSSGVFHHIDRLYPIAEILLEDYPHLSKADIFSLGLSVDEAITGSPLSESGVQS---LTIRS------------ 477 (524)
T ss_pred ccc--ceecccccccccccccchhhccccccccccccccccccccccccCcccCcccccc---eeeec------------
Confidence 743 11122233334455 3666666667899999999999999999987443222111 11100
Q ss_pred cCCCCcccCCCcccCCCcccccCCCCChhHhhhhccccccCCCCcCCHHHhhCCCCCCCC
Q 011138 367 MNPNYTEFKFPQIKAHPWHKIFHKRMPPEALDLVSRLLQYSPSLRCTALEACAHPFFDDL 426 (492)
Q Consensus 367 ~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~Li~~~L~~dP~~R~t~~e~l~Hp~f~~~ 426 (492)
-..|. ......++..+.+.++..|+..|+.+.++..|.-|...
T Consensus 478 -------~~~p~----------~~~~~~~~q~~~kv~~~~~~~~~~l~~~l~~~~~~~~~ 520 (524)
T KOG0601|consen 478 -------GDTPN----------LPGLKLQLQVLLKVMINPDRKRRPSAVELSLHSEFYRD 520 (524)
T ss_pred -------ccccC----------CCchHHhhhhhhhhhcCCccccchhhhhhcccchhhhh
Confidence 00111 01234678889999999999999999999988877643
No 444
>KOG3741 consensus Poly(A) ribonuclease subunit [RNA processing and modification]
Probab=99.19 E-value=3.8e-10 Score=113.32 Aligned_cols=213 Identities=20% Similarity=0.278 Sum_probs=152.3
Q ss_pred ceEEEEEEEcCCCCEEEEEEeccchhh----HHHHHHHHHHcCCCCccccceeeeeccCCCceEEEEEeeechh--hHHH
Q 011138 150 FGVVFQAKCLETGDSVAIKKVLQDKRY----KNRELQIMRLLNHPNVVSLKHCFFSTTEKDELYLNLVLEYISE--TVYR 223 (492)
Q Consensus 150 fg~Vy~~~~~~~g~~vAiK~~~~~~~~----~~~E~~il~~l~h~nIv~l~~~~~~~~~~~~~~~~lV~E~~~~--~l~~ 223 (492)
-.+.|++....+|..|.+|++.-++.. .-.-+++++++.|.|||.+.++|.+.. .++..+++|++|.++ +|++
T Consensus 289 ~~Ttyk~~s~~DG~~YvLkRlhg~r~~~~nk~t~lve~wkkl~h~NvV~frevf~t~t-F~D~SlvlvYDYyP~s~TL~d 367 (655)
T KOG3741|consen 289 SITTYKATSNVDGNAYVLKRLHGDRDQSTNKDTSLVEAWKKLCHTNVVPFREVFLTYT-FGDLSLVLVYDYYPSSPTLYD 367 (655)
T ss_pred cceeEeeeeccCCceeeeeeeccccccCcccchHHHHHHHHhccCceeehhhhhhhhc-cCcceEEEEEecCCCCchHHH
Confidence 357799999999999999998433221 224688999999999999999987444 566678999999984 5554
Q ss_pred Hhhh-----------hhhcCCCcCHHHHHHHHHHHHHHHHHHHhhCCcccCCCCCCceEEcCCCCcEEEeeecCccccCC
Q 011138 224 VSKH-----------YTRMNQHVPILYVQLYTYQICRALNYLHHVVGVCHRDIKPQNLLVNPHTHQLKICDFGSAKMLVP 292 (492)
Q Consensus 224 ~~~~-----------~~~~~~~~~~~~~~~i~~qi~~aL~yLH~~~givHrDlKp~NILl~~~~~~vkL~DFG~a~~~~~ 292 (492)
.... +...+...++..+|.|+.||..||.++|+ .|+.-+-|.|.+||++.+. +++|...|....+..
T Consensus 368 ~~F~~~~~t~~~n~~~~~~~~~~~e~~lW~y~~QLtaaL~sIHs-sGLAck~L~~~kIlv~G~~-RIriS~C~i~Dvl~~ 445 (655)
T KOG3741|consen 368 LYFANPPFTKRTNSFYPSQNLKAPEEVLWSYISQLTAALYSIHS-SGLACKTLDLKKILVTGKM-RIRISGCGIMDVLQE 445 (655)
T ss_pred HHccCCccccccccccccCCCCchHHHHHHHHHHHHHHHHHHHh-cCceeecccHhHeEeeCcc-eEEEecccceeeecC
Confidence 3221 11224567889999999999999999997 8999999999999999776 799998888766544
Q ss_pred CCCCccceeccCccCchhhcCCCCCCcchhhHHHHHHHHHHHhCCCC-CCCCChHHH-HHHHHHHhCCCCHHHHhhcCCC
Q 011138 293 GEPNISYICSRYYRAPELIFGATEYTTAIDMWSIGCVLAELLLGQPL-FPGESGVDQ-LVEIIKILGTPTREEIKCMNPN 370 (492)
Q Consensus 293 ~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DvwSlGvil~ell~G~~p-f~~~~~~~~-~~~i~~~~g~p~~~~~~~~~~~ 370 (492)
+. . |.+.+ -.+-|.=.||.+++.|.||..- +......+. +..|
T Consensus 446 d~-----------~--~~le~----~Qq~D~~~lG~ll~aLAt~~~ns~~~d~~~~s~~~~I------------------ 490 (655)
T KOG3741|consen 446 DP-----------T--EPLES----QQQNDLRDLGLLLLALATGTENSNRTDSTQSSHLTRI------------------ 490 (655)
T ss_pred CC-----------C--cchhH----HhhhhHHHHHHHHHHHhhcccccccccchHHHHHHHh------------------
Confidence 33 0 11222 2356899999999999999633 111111111 1111
Q ss_pred CcccCCCcccCCCcccccCCCCChhHhhhhccccccCCCCcCCHHHhhC
Q 011138 371 YTEFKFPQIKAHPWHKIFHKRMPPEALDLVSRLLQYSPSLRCTALEACA 419 (492)
Q Consensus 371 ~~~~~~~~~~~~~~~~~~~~~~s~~~~~Li~~~L~~dP~~R~t~~e~l~ 419 (492)
...++.+++++|.-+...++++ -++.+++.
T Consensus 491 ------------------~~~yS~D~rn~v~yl~s~~~~~-ksI~~llp 520 (655)
T KOG3741|consen 491 ------------------TTTYSTDLRNVVEYLESLNFRE-KSIQDLLP 520 (655)
T ss_pred ------------------hhhhhHHHHHHHHHHHhcCccc-ccHHHHHH
Confidence 1346788888888888888875 45555554
No 445
>KOG2137 consensus Protein kinase [Signal transduction mechanisms]
Probab=99.17 E-value=1.3e-11 Score=127.87 Aligned_cols=155 Identities=22% Similarity=0.351 Sum_probs=115.2
Q ss_pred HHHHHHHHHHhhCCcccCCCCCCceEEcCCCCcEEEeeecCccccCCCCC--------Ccc--ceeccCccCchhhcCCC
Q 011138 246 QICRALNYLHHVVGVCHRDIKPQNLLVNPHTHQLKICDFGSAKMLVPGEP--------NIS--YICSRYYRAPELIFGAT 315 (492)
Q Consensus 246 qi~~aL~yLH~~~givHrDlKp~NILl~~~~~~vkL~DFG~a~~~~~~~~--------~~~--~~gt~~y~aPE~~~~~~ 315 (492)
+++.||.|+|...++||+.|.|++|.++.++ ..||+.|+++....+... ... ..-...|.|||++.+ .
T Consensus 107 ~v~dgl~flh~sAk~VH~ni~p~~i~~na~~-~wkl~Gf~f~v~~~~~~~~p~~~yd~~lp~~~~~~~~f~apE~~~~-~ 184 (700)
T KOG2137|consen 107 NVADGLAFLHRSAKVVHGNIQPEAIVVNANG-DWKLAGFSFCVNANGPTEYPFSEYDPPLPLLLQPHLNFLAPEYLLG-T 184 (700)
T ss_pred cccchhhhhccCcceeecccchhheeeccCc-ceeeccchhhhccCCCCccccccCCCCCChhhccCcccccchhhcc-c
Confidence 3448999999878999999999999999888 799999998765433111 111 122567999999976 4
Q ss_pred CCCcchhhHHHHHHHHHHH-hCCCCCCCCChHHHHHHHHHHhCCCCHHHHhhcCCCCcccCCCcccCCCcccccCCCCCh
Q 011138 316 EYTTAIDMWSIGCVLAELL-LGQPLFPGESGVDQLVEIIKILGTPTREEIKCMNPNYTEFKFPQIKAHPWHKIFHKRMPP 394 (492)
Q Consensus 316 ~~~~~~DvwSlGvil~ell-~G~~pf~~~~~~~~~~~i~~~~g~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~ 394 (492)
..+.++|++|+||++|.+. .|+..+.+.+.......-....+. + ...+...+++
T Consensus 185 ~~~~~sd~fSlG~li~~i~~~gk~i~~a~~~~~~~~~~~~~~~~------------------~-------~~~~s~~~p~ 239 (700)
T KOG2137|consen 185 TNTPASDVFSLGVLIYTIYNGGKSIIAANGGLLSYSFSRNLLNA------------------G-------AFGYSNNLPS 239 (700)
T ss_pred cccccccceeeeeEEEEEecCCcchhhccCCcchhhhhhccccc------------------c-------cccccccCcH
Confidence 5789999999999999999 677777665433222211110000 0 0112257899
Q ss_pred hHhhhhccccccCCCCcCCHHHhhCCCCCCCCC
Q 011138 395 EALDLVSRLLQYSPSLRCTALEACAHPFFDDLR 427 (492)
Q Consensus 395 ~~~~Li~~~L~~dP~~R~t~~e~l~Hp~f~~~~ 427 (492)
++++=|.++|..|+..||++.+++..|||.+..
T Consensus 240 el~~~l~k~l~~~~~~rp~~~~l~~~~ff~D~~ 272 (700)
T KOG2137|consen 240 ELRESLKKLLNGDSAVRPTLDLLLSIPFFSDPG 272 (700)
T ss_pred HHHHHHHHHhcCCcccCcchhhhhcccccCCch
Confidence 999999999999999999999999999999754
No 446
>KOG3087 consensus Serine/threonine protein kinase [General function prediction only]
Probab=99.10 E-value=1.2e-09 Score=96.32 Aligned_cols=139 Identities=17% Similarity=0.242 Sum_probs=94.5
Q ss_pred eeeeccCCceEEEEEEEcCCCCEEEEEEec-c-----------chhhHHHHHHHHHHcCCCCccccceeeeeccCCCceE
Q 011138 142 ERVVGTGSFGVVFQAKCLETGDSVAIKKVL-Q-----------DKRYKNRELQIMRLLNHPNVVSLKHCFFSTTEKDELY 209 (492)
Q Consensus 142 ~~~lG~G~fg~Vy~~~~~~~g~~vAiK~~~-~-----------~~~~~~~E~~il~~l~h~nIv~l~~~~~~~~~~~~~~ 209 (492)
...|-+|+-+.|+++.+ .|+.+.||.-. + ......+|+++|.++.--.|.-..-+|.+.. .
T Consensus 12 l~likQGAEArv~~~~~--~Ge~~iIK~Rf~K~YRHP~LD~kLtr~Rt~~Ear~l~k~~~~GI~~P~l~~~D~~-----~ 84 (229)
T KOG3087|consen 12 LELIKQGAEARVPRGSF--SGEAAIIKERFSKRYRHPALDQKLTRKRTKQEARLLAKCRALGIPAPRLIFIDTY-----G 84 (229)
T ss_pred ceeeeccceeeEeeecc--CCceeEEeecccccccchHHHHHHHHHHHHHHHHHHHHHHHhCCCCceEEEEecC-----C
Confidence 45688999999999987 68888888431 1 1122346999998886434433322332221 2
Q ss_pred EEEEeeechh--hHHHHhhhhhhcCCCcCHHHHHHHHHHHHHHHHHHHhhCCcccCCCCCCceEEcCCCCcE--EEeeec
Q 011138 210 LNLVLEYISE--TVYRVSKHYTRMNQHVPILYVQLYTYQICRALNYLHHVVGVCHRDIKPQNLLVNPHTHQL--KICDFG 285 (492)
Q Consensus 210 ~~lV~E~~~~--~l~~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~yLH~~~givHrDlKp~NILl~~~~~~v--kL~DFG 285 (492)
-+|+|||++| .+.+.+.... ...........++.+|=..+.-||. .+|||+||..+||++.+++.++ .|+|||
T Consensus 85 ~~i~ME~~~g~~~vk~~i~~~~--~~~~~d~~~~~~~~~iG~~igklH~-ndiiHGDLTTSNill~~~~~~~~~~lIdfg 161 (229)
T KOG3087|consen 85 GQIYMEFIDGASTVKDFILSTM--EDESEDEGLAELARRIGELIGKLHD-NDIIHGDLTTSNILLRSDGNQITPILIDFG 161 (229)
T ss_pred CeEEEEeccchhHHHHHHHHHc--cCcccchhHHHHHHHHHHHHHHhhh-CCeecccccccceEEecCCCcCceEEEeec
Confidence 4589999998 4444333221 2222223336778889999999997 8999999999999998887655 899999
Q ss_pred Ccccc
Q 011138 286 SAKML 290 (492)
Q Consensus 286 ~a~~~ 290 (492)
++...
T Consensus 162 ls~~s 166 (229)
T KOG3087|consen 162 LSSVS 166 (229)
T ss_pred chhcc
Confidence 98643
No 447
>COG4248 Uncharacterized protein with protein kinase and helix-hairpin-helix DNA-binding domains [General function prediction only]
Probab=99.05 E-value=4.7e-09 Score=103.13 Aligned_cols=256 Identities=16% Similarity=0.193 Sum_probs=158.2
Q ss_pred EeeeeccCCceEEEEEEEcCCCCEEEEEEeccchhhH-HHHHHHHHHc-CCCCccc----cceeeeeccCCCceEEEEEe
Q 011138 141 AERVVGTGSFGVVFQAKCLETGDSVAIKKVLQDKRYK-NRELQIMRLL-NHPNVVS----LKHCFFSTTEKDELYLNLVL 214 (492)
Q Consensus 141 ~~~~lG~G~fg~Vy~~~~~~~g~~vAiK~~~~~~~~~-~~E~~il~~l-~h~nIv~----l~~~~~~~~~~~~~~~~lV~ 214 (492)
.++-||+|+-+.+|-.-. -+..|| |++....-.. .+-+..|... .||-+-. -....+.. .....+.++|
T Consensus 15 ~gr~LgqGgea~ly~l~e--~~d~VA-KIYh~Pppa~~aqk~a~la~~p~~p~~~~rvaWPqa~L~G~--~~~~~iGflm 89 (637)
T COG4248 15 PGRPLGQGGEADLYTLGE--VRDQVA-KIYHAPPPAAQAQKVAELAATPDAPLLNYRVAWPQATLHGG--RRGKVIGFLM 89 (637)
T ss_pred CCccccCCccceeeecch--hhchhh-eeecCCCchHHHHHHHHhccCCCCcchhhhhcccHHHhhCC--CccceeEEec
Confidence 345699999999986532 233344 7775432211 1223333322 3543322 11111111 2223366788
Q ss_pred eechhh--HHHHh--hhhhhcCCCcCHHHHHHHHHHHHHHHHHHHhhCCcccCCCCCCceEEcCCCCcEEEeeecCcccc
Q 011138 215 EYISET--VYRVS--KHYTRMNQHVPILYVQLYTYQICRALNYLHHVVGVCHRDIKPQNLLVNPHTHQLKICDFGSAKML 290 (492)
Q Consensus 215 E~~~~~--l~~~~--~~~~~~~~~~~~~~~~~i~~qi~~aL~yLH~~~givHrDlKp~NILl~~~~~~vkL~DFG~a~~~ 290 (492)
..+.|. ...+. ...+.......+..+...++.|+.+..-||. .|.+-+|+.++|+|+..++ .|.|.|=..-...
T Consensus 90 P~v~g~~pI~~~y~p~tRRqs~P~~~w~fllrvaRnlA~aFA~lH~-~Gh~vGDVn~~~~lVsd~~-~V~LVdsDsfqi~ 167 (637)
T COG4248 90 PKVSGKEPIHMIYSPATRRQSYPHCAWDFLLRVARNLASAFATLHE-HGHVVGDVNQNSFLVSDDS-KVVLVDSDSFQIN 167 (637)
T ss_pred ccCCCccchhhhcCchhhcccCCccccHHHHHHHHHHHHHHHHHHh-cCCcccccCccceeeecCc-eEEEEcccceeec
Confidence 888752 22211 1222334556788889999999999999997 8999999999999999887 7999987766555
Q ss_pred CCCCCCccceeccCccCchhhc----CCCCCCcchhhHHHHHHHHHHHhC-CCCCCCCChHHHHHHHHHHhCCCCHHHHh
Q 011138 291 VPGEPNISYICSRYYRAPELIF----GATEYTTAIDMWSIGCVLAELLLG-QPLFPGESGVDQLVEIIKILGTPTREEIK 365 (492)
Q Consensus 291 ~~~~~~~~~~gt~~y~aPE~~~----~~~~~~~~~DvwSlGvil~ell~G-~~pf~~~~~~~~~~~i~~~~g~p~~~~~~ 365 (492)
.++......+|...|.+||.-. ....-+...|.|.|||+++++|.| +.||.|.... .--+.|-+..+.
T Consensus 168 ~ng~~~~cpVg~~eftPPElQ~~~sf~g~~r~~~hD~FGLavLiF~lL~ggrHPysGI~~~-------~~ap~p~E~~Ia 240 (637)
T COG4248 168 ANGTLHLCPVGVSEFTPPELQTLPSFVGFERTANHDNFGLAVLIFHLLFGGRHPYSGIPLI-------SDAPNPLETDIA 240 (637)
T ss_pred cCCceEecccCccccCCHHHhccccccccCCCccccchhHHHHHHHHHhcCCCCCCccccc-------CCCCCcchhhhh
Confidence 6666667789999999999753 112246789999999999999986 9999874311 000111111222
Q ss_pred hcCCC----CcccCCCcccCCCcccccCCCCChhHhhhhcccccc--CCCCcCCHH
Q 011138 366 CMNPN----YTEFKFPQIKAHPWHKIFHKRMPPEALDLVSRLLQY--SPSLRCTAL 415 (492)
Q Consensus 366 ~~~~~----~~~~~~~~~~~~~~~~~~~~~~s~~~~~Li~~~L~~--dP~~R~t~~ 415 (492)
...-- -.....|.....+| .-+++++..|..+|++. ++.-|||++
T Consensus 241 ~g~f~ya~~~~~g~~p~P~~~P~-----~~Lpp~vqAlF~qaF~~~~~~~~RP~a~ 291 (637)
T COG4248 241 HGRFAYASDQRRGLKPPPRSIPL-----SMLPPDVQALFQQAFTESGVATPRPTAK 291 (637)
T ss_pred cceeeechhccCCCCCCCCCCCh-----hhcCHHHHHHHHHHhcccCCCCCCCCHH
Confidence 11101 11112222233333 35789999999999875 467899865
No 448
>COG3642 Mn2+-dependent serine/threonine protein kinase [Signal transduction mechanisms]
Probab=99.04 E-value=2.8e-09 Score=94.40 Aligned_cols=127 Identities=17% Similarity=0.274 Sum_probs=83.9
Q ss_pred eeeccCCceEEEEEEEcCCCCEEEEEEe-ccc-----------hhhHHHHHHHHHHcCCCCccccceeeeeccCCCceEE
Q 011138 143 RVVGTGSFGVVFQAKCLETGDSVAIKKV-LQD-----------KRYKNRELQIMRLLNHPNVVSLKHCFFSTTEKDELYL 210 (492)
Q Consensus 143 ~~lG~G~fg~Vy~~~~~~~g~~vAiK~~-~~~-----------~~~~~~E~~il~~l~h~nIv~l~~~~~~~~~~~~~~~ 210 (492)
..+++|+-+.+|.+.+ -|..+.+|.- .+. .....+|+.++..+.--.|...+-+++... ..
T Consensus 2 ~~i~~GAEa~i~~~~~--~g~~av~K~Ri~K~YR~p~LD~klrr~Rt~~Earil~~a~~~GV~~P~v~dvD~~-----~~ 74 (204)
T COG3642 2 DLIKQGAEAIIYLTDF--LGLPAVVKERIPKRYRHPELDEKLRRERTRREARILAKAREAGVPVPIVYDVDPD-----NG 74 (204)
T ss_pred chhhCCcceeEEeeec--cCcceEEEeecCcccCChHHHHHHHHHHHHHHHHHHHHHHHcCCCCCeEEEEcCC-----CC
Confidence 3578999999999966 3445666642 111 112246999998886433333222222221 24
Q ss_pred EEEeeechhhHHHHhhhhhhcCCCcCHHHHHHHHHHHHHHHHHHHhhCCcccCCCCCCceEEcCCCCcEEEeeecCccc
Q 011138 211 NLVLEYISETVYRVSKHYTRMNQHVPILYVQLYTYQICRALNYLHHVVGVCHRDIKPQNLLVNPHTHQLKICDFGSAKM 289 (492)
Q Consensus 211 ~lV~E~~~~~l~~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~yLH~~~givHrDlKp~NILl~~~~~~vkL~DFG~a~~ 289 (492)
.|+|||++|.++...... . . ..++..|=.-+.-||. .||||+||.++||++..+ .+.++|||++..
T Consensus 75 ~I~me~I~G~~lkd~l~~---~---~----~~~~r~vG~~vg~lH~-~givHGDLTtsNiIl~~~--~i~~IDfGLg~~ 140 (204)
T COG3642 75 LIVMEYIEGELLKDALEE---A---R----PDLLREVGRLVGKLHK-AGIVHGDLTTSNIILSGG--RIYFIDFGLGEF 140 (204)
T ss_pred EEEEEEeCChhHHHHHHh---c---c----hHHHHHHHHHHHHHHh-cCeecCCCccceEEEeCC--cEEEEECCcccc
Confidence 589999999776522211 1 1 2345566667778997 899999999999999855 499999999974
No 449
>cd05154 ACAD10_11_like Acyl-CoA dehydrogenase (ACAD) 10 and 11, N-terminal domain, and similar proteins. This subfamily is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). This subfamily is composed of bacterial and eukaryotic proteins with similarity to the N-terminal domains of vertebrate ACAD10 and ACAD11. ACADs are a family of flavoproteins that are involved in the beta-oxidation of fatty acyl-CoA derivatives. ACAD deficiency can cause metabolic disorders including muscle fatigue, hypoglycemia, and hepatic lipidosis, among them. There are at least 11 distinct ACADs, some of which show distinct substrate specificities to either straight-chain or branched-chain fatty acids. ACAD10 is widely expressed in human tissues and is highly expressed in liver, kidney, pancreas, and spleen. ACAD10 and ACAD11 contain
Probab=99.02 E-value=2.3e-09 Score=100.47 Aligned_cols=140 Identities=16% Similarity=0.187 Sum_probs=94.6
Q ss_pred eeeccCCceEEEEEEEcCCCCEEEEEEeccc-----hhhHHHHHHHHHHcCCC--CccccceeeeeccCCCceEEEEEee
Q 011138 143 RVVGTGSFGVVFQAKCLETGDSVAIKKVLQD-----KRYKNRELQIMRLLNHP--NVVSLKHCFFSTTEKDELYLNLVLE 215 (492)
Q Consensus 143 ~~lG~G~fg~Vy~~~~~~~g~~vAiK~~~~~-----~~~~~~E~~il~~l~h~--nIv~l~~~~~~~~~~~~~~~~lV~E 215 (492)
+.|+.|.++.||++... +|+.+++|..... .....+|..+++.+.+. ++.+++.+..... .....++|||
T Consensus 4 ~~l~~G~~n~~~~v~~~-~g~~~ilK~~~~~~~~~~~~~~~~E~~~~~~l~~~~~~vp~~~~~~~~~~--~~~~~~~v~e 80 (223)
T cd05154 4 RQLSGGQSNLTYLLTAG-GGRRLVLRRPPPGALLPSAHDVAREYRVLRALAGTGVPVPKVLALCEDPS--VLGTPFYVME 80 (223)
T ss_pred eecCCCccceEEEEEec-CCcceEEEeCCCcccCcccccHHHHHHHHHHhhCCCCCCCCEEEECCCCC--ccCCceEEEE
Confidence 46899999999999863 3688999987543 23567899999999764 4566655442111 1123579999
Q ss_pred echhhHHHHhhhhhhcCCCcCHHHHHHHHHHHHHHHHHHHh---------------------------------------
Q 011138 216 YISETVYRVSKHYTRMNQHVPILYVQLYTYQICRALNYLHH--------------------------------------- 256 (492)
Q Consensus 216 ~~~~~l~~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~yLH~--------------------------------------- 256 (492)
|++|..+..... ...++......++.+++.+|.+||+
T Consensus 81 ~i~G~~l~~~~~----~~~~~~~~~~~i~~~i~~~l~~lH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 156 (223)
T cd05154 81 RVDGRVLRDRLL----RPELSPEERRALARALADTLAALHSVDPAAVGLGDLGRPGGYLERQVARWRRQYDASRTDEPPA 156 (223)
T ss_pred EeCCEecCCCCC----CCCCCHHHHHHHHHHHHHHHHHHhCCChhhcCCcccCCCCchHHHHHHHHHHHHHhhcccccHH
Confidence 998763321110 0234555555666666666666663
Q ss_pred ----------------hCCcccCCCCCCceEEcCC-CCcEEEeeecCccc
Q 011138 257 ----------------VVGVCHRDIKPQNLLVNPH-THQLKICDFGSAKM 289 (492)
Q Consensus 257 ----------------~~givHrDlKp~NILl~~~-~~~vkL~DFG~a~~ 289 (492)
...++|+|++|.||+++.+ ...+.|+||+.+..
T Consensus 157 ~~~~~~~~~~~~~~~~~~~l~HgD~~~~Nil~~~~~~~~~~iID~e~~~~ 206 (223)
T cd05154 157 MERLLRWLEAHLPADSRPGLVHGDYRLGNVLFHPDEPRVVAVLDWELATL 206 (223)
T ss_pred HHHHHHHHHhhCCCCCCcEEEECCCCcccEEEcCCCCcEEEEEecccccc
Confidence 1347999999999999973 22689999998863
No 450
>PF01163 RIO1: RIO1 family; InterPro: IPR018934 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases. Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. This entry represents RIO kinase, they exhibit little sequence similarity with eukaryotic protein kinases, and are classified as atypical protein kinases []. The conformation of ATP when bound to the RIO kinases is unique when compared with ePKs, such as serine/threonine kinases or the insulin receptor tyrosine kinase, suggesting that the detailed mechanism by which the catalytic aspartate of RIO kinases participates in phosphoryl transfer may not be identical to that employed in known serine/threonine ePKs. Representatives of the RIO family are present in organisms varying from Archaea to humans, although the RIO3 proteins have only been identified in multicellular eukaryotes, to date. Yeast Rio1 and Rio2 proteins are required for proper cell cycle progression and chromosome maintenance, and are necessary for survival of the cells. These proteins are involved in the processing of 20 S pre-rRNA via late 18 S rRNA processing. ; GO: 0003824 catalytic activity, 0005524 ATP binding; PDB: 1TQP_A 1ZAR_A 1TQI_A 1ZAO_A 1TQM_A 3RE4_A 1ZTH_B 1ZP9_A 1ZTF_A.
Probab=98.98 E-value=2e-09 Score=97.99 Aligned_cols=121 Identities=23% Similarity=0.288 Sum_probs=76.6
Q ss_pred EEEEEEEcCCCCEEEEEEeccc------------------------------hhhHHHHHHHHHHcCCC--Cccccceee
Q 011138 152 VVFQAKCLETGDSVAIKKVLQD------------------------------KRYKNRELQIMRLLNHP--NVVSLKHCF 199 (492)
Q Consensus 152 ~Vy~~~~~~~g~~vAiK~~~~~------------------------------~~~~~~E~~il~~l~h~--nIv~l~~~~ 199 (492)
.||.|.. .+|..+|||+.... ....++|.+.|..+..- ++.+++++.
T Consensus 1 ~Vy~~~~-~~~~~~a~K~~r~~~~~Fk~~~~y~~~~~r~~~~~~~~~~~~~~~~~~~~E~~~L~~l~~~Gv~vP~p~~~~ 79 (188)
T PF01163_consen 1 DVYHAID-PDGEEVAVKIYRTGRTSFKRRKKYRDYDYRFKKYRHKSSWRYLIREWAKKEFRNLKRLYEAGVPVPKPYDYN 79 (188)
T ss_dssp EEEEEEE-CTTEEEEEEEE-S---SS-HHHHHTTTSTTSTTC--G--CHHHHHHHHHHHHHHHHHCCCTT-SS--EEEEE
T ss_pred CEEEEEC-CCCCEEEEEEeccCceEEEEeeeeecccchhcccccccCHHHHHHHHHHHHHHHHHHHHHCCccCCcEEEEe
Confidence 3899885 56789999976321 01124799999999865 566665542
Q ss_pred eeccCCCceEEEEEeeech--hhHHHHhhhhhhcCCCcCHHHHHHHHHHHHHHHHH-HHhhCCcccCCCCCCceEEcCCC
Q 011138 200 FSTTEKDELYLNLVLEYIS--ETVYRVSKHYTRMNQHVPILYVQLYTYQICRALNY-LHHVVGVCHRDIKPQNLLVNPHT 276 (492)
Q Consensus 200 ~~~~~~~~~~~~lV~E~~~--~~l~~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~y-LH~~~givHrDlKp~NILl~~~~ 276 (492)
. -+|||||++ |..+..+.... +.......++.+++..+.. +|+ .||||+||.+.|||++.+
T Consensus 80 -----~----~~ivME~I~~~G~~~~~l~~~~-----~~~~~~~~~~~~il~~~~~~~~~-~givHGDLs~~NIlv~~~- 143 (188)
T PF01163_consen 80 -----R----NVIVMEYIGEDGVPLPRLKDVD-----LSPEEPKELLEEILEEIIKMLHK-AGIVHGDLSEYNILVDDG- 143 (188)
T ss_dssp -----T----TEEEEE--EETTEEGGCHHHCG-----GGGSTHHHHHHHHHHHHHHHHHC-TTEEESS-STTSEEEETT-
T ss_pred -----C----CEEEEEecCCCccchhhHHhcc-----ccchhHHHHHHHHHHHHHHHHHh-cCceecCCChhhEEeecc-
Confidence 1 248999999 64333222211 1123355667788885555 576 899999999999999966
Q ss_pred CcEEEeeecCcccc
Q 011138 277 HQLKICDFGSAKML 290 (492)
Q Consensus 277 ~~vkL~DFG~a~~~ 290 (492)
.+.|+|||.+...
T Consensus 144 -~~~iIDf~qav~~ 156 (188)
T PF01163_consen 144 -KVYIIDFGQAVDS 156 (188)
T ss_dssp -CEEE--GTTEEET
T ss_pred -eEEEEecCcceec
Confidence 5999999988654
No 451
>PRK15123 lipopolysaccharide core heptose(I) kinase RfaP; Provisional
Probab=98.91 E-value=3.5e-08 Score=95.16 Aligned_cols=133 Identities=14% Similarity=0.130 Sum_probs=87.5
Q ss_pred EEEEEEEcCCCCEEEEEEeccch---------------hhHHHHHHHHHHcCCCCcccc--ceeeeeccCCCceEEEEEe
Q 011138 152 VVFQAKCLETGDSVAIKKVLQDK---------------RYKNRELQIMRLLNHPNVVSL--KHCFFSTTEKDELYLNLVL 214 (492)
Q Consensus 152 ~Vy~~~~~~~g~~vAiK~~~~~~---------------~~~~~E~~il~~l~h~nIv~l--~~~~~~~~~~~~~~~~lV~ 214 (492)
.|+++.. .|+.|.||...... ....+|...+..|..-+|... +.++..........-+|||
T Consensus 37 rvvr~~~--~g~~~~vKr~~~~~~~~~~k~l~~~~~p~~~a~rE~~~l~~L~~~GIptP~pVa~~e~~~~~~~~~s~LVt 114 (268)
T PRK15123 37 RTLRFEL--AGKSYFLKWHRGTGWGEIFKNLLSLRMPVLGADREWRAIHRLHEVGVDTMTGVAFGERGSNPATRTSFIIT 114 (268)
T ss_pred eEEEEEE--CCEEEEEEEecCCcHHHHhhhhcccccccHHHHHHHHHHHHHHHcCCCCCCeeEEEEecCCCccceeEEEE
Confidence 3555443 56678888552211 125689998888865454443 3333221111123457999
Q ss_pred eechhh--HHHHhhhhhhcCCCcCHHHHHHHHHHHHHHHHHHHhhCCcccCCCCCCceEEcCC------CCcEEEeeecC
Q 011138 215 EYISET--VYRVSKHYTRMNQHVPILYVQLYTYQICRALNYLHHVVGVCHRDIKPQNLLVNPH------THQLKICDFGS 286 (492)
Q Consensus 215 E~~~~~--l~~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~yLH~~~givHrDlKp~NILl~~~------~~~vkL~DFG~ 286 (492)
|++++. +.+++.... ....+......++.+|+..+.-||+ .||+|+|+++.|||++.+ ...+.|+||+.
T Consensus 115 e~l~~~~sL~~~~~~~~--~~~~~~~~~~~ll~~la~~i~~LH~-~Gi~HgDL~~~NiLl~~~~~~~~~~~~~~LIDl~r 191 (268)
T PRK15123 115 EDLAPTISLEDYCADWA--TNPPDPRLKRMLIKRVATMVRDMHA-AGINHRDCYICHFLLHLPFPGREEDLKLSVIDLHR 191 (268)
T ss_pred eeCCCCccHHHHHHhhc--ccCCCHHHHHHHHHHHHHHHHHHHH-CcCccCCCChhhEEEeccccCCCCCceEEEEECCc
Confidence 999974 444433211 2344556677899999999999997 999999999999999752 23799999998
Q ss_pred ccc
Q 011138 287 AKM 289 (492)
Q Consensus 287 a~~ 289 (492)
+..
T Consensus 192 ~~~ 194 (268)
T PRK15123 192 AQI 194 (268)
T ss_pred ccc
Confidence 853
No 452
>COG0478 RIO-like serine/threonine protein kinase fused to N-terminal HTH domain [Signal transduction mechanisms]
Probab=98.87 E-value=9.8e-09 Score=96.23 Aligned_cols=132 Identities=19% Similarity=0.175 Sum_probs=91.9
Q ss_pred ceeEeeeeccCCceEEEEEEEcCCCCEEEEEEecc----------c----------------hhhHHHHHHHHHHcCCC-
Q 011138 138 SYMAERVVGTGSFGVVFQAKCLETGDSVAIKKVLQ----------D----------------KRYKNRELQIMRLLNHP- 190 (492)
Q Consensus 138 ~y~~~~~lG~G~fg~Vy~~~~~~~g~~vAiK~~~~----------~----------------~~~~~~E~~il~~l~h~- 190 (492)
-+.++..||-|--+.||.|.+. .|.++|||.=.. . ....++|.++|.+|...
T Consensus 92 ve~iG~~IGvGKEsdVY~~~~~-~g~~~~vKfHR~GrtsFrkvk~~R~y~~~~~h~sWl~~sRl~A~rEf~~L~~L~~~G 170 (304)
T COG0478 92 VEAIGTKIGVGKESDVYVAIDP-KGRKVAVKFHRLGRTSFRKVKRNRDYLADKEHGSWLYVSRLAAEREFEALQRLYPEG 170 (304)
T ss_pred HHhhccccccCccceEEEEECC-CCCEEEEEEeecCchhhhhhcchhhhhccccCcchhhhHHHHHHHHHHHHHHhhhcC
Confidence 3667889999999999999864 789999995311 0 12235799999999755
Q ss_pred -CccccceeeeeccCCCceEEEEEeeechhhHHHHhhhhhhcCCCcCHHHHHHHHHHHHHHHHHHHhhCCcccCCCCCCc
Q 011138 191 -NVVSLKHCFFSTTEKDELYLNLVLEYISETVYRVSKHYTRMNQHVPILYVQLYTYQICRALNYLHHVVGVCHRDIKPQN 269 (492)
Q Consensus 191 -nIv~l~~~~~~~~~~~~~~~~lV~E~~~~~l~~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~yLH~~~givHrDlKp~N 269 (492)
.+.+.+++ +.-++|||+++|-.+.-.. +.......++..|+.-+.-+-. .||||+|+.+-|
T Consensus 171 ~~VP~P~~~---------nRHaVvMe~ieG~eL~~~r--------~~~en~~~il~~il~~~~~~~~-~GiVHGDlSefN 232 (304)
T COG0478 171 VKVPKPIAW---------NRHAVVMEYIEGVELYRLR--------LDVENPDEILDKILEEVRKAYR-RGIVHGDLSEFN 232 (304)
T ss_pred CCCCCcccc---------ccceeeeehcccceeeccc--------CcccCHHHHHHHHHHHHHHHHH-cCccccCCchhe
Confidence 66666443 2356999999985433111 1122233344444444444444 799999999999
Q ss_pred eEEcCCCCcEEEeeecCccc
Q 011138 270 LLVNPHTHQLKICDFGSAKM 289 (492)
Q Consensus 270 ILl~~~~~~vkL~DFG~a~~ 289 (492)
|+++.++ .+.++||--+..
T Consensus 233 IlV~~dg-~~~vIDwPQ~v~ 251 (304)
T COG0478 233 ILVTEDG-DIVVIDWPQAVP 251 (304)
T ss_pred EEEecCC-CEEEEeCccccc
Confidence 9999998 699999987653
No 453
>KOG0576 consensus Mitogen-activated protein kinase kinase kinase kinase (MAP4K), germinal center kinase family [Signal transduction mechanisms]
Probab=98.78 E-value=1.6e-09 Score=111.35 Aligned_cols=248 Identities=19% Similarity=0.136 Sum_probs=167.2
Q ss_pred ceeEeeeeccCCceEEEEEEEcCCCCEEEEEEeccchhhHHHHHHHHHHcCCCC-ccccceeeeeccCCCceEEEEEeee
Q 011138 138 SYMAERVVGTGSFGVVFQAKCLETGDSVAIKKVLQDKRYKNRELQIMRLLNHPN-VVSLKHCFFSTTEKDELYLNLVLEY 216 (492)
Q Consensus 138 ~y~~~~~lG~G~fg~Vy~~~~~~~g~~vAiK~~~~~~~~~~~E~~il~~l~h~n-Iv~l~~~~~~~~~~~~~~~~lV~E~ 216 (492)
.|...+-+++|+++.+++.+...+...+ .+.+... ....-++++|.+++||| .+..++-+ +.+.+..++|++
T Consensus 243 ws~~fh~fvK~altknpKkRptaeklL~-h~fvs~~-l~~rl~~eLLdK~n~P~~~v~~~~d~-----~~E~~~~i~~~i 315 (829)
T KOG0576|consen 243 WSEFFHNFVKGALTKNPKKRPTAEKLLQ-HPFVSQT-LSRRLAIELLDKVNNPNPVVRYLEDY-----DGEDYLWIPMRI 315 (829)
T ss_pred chHHHHHHHHHHhcCCCccCCChhhhee-ceeeccc-hhhHHHHHHHHHccCCCCcccccccC-----Ccccccchhhhh
Confidence 3566677999999999999876655444 6766554 44456899999999999 55444433 566788999999
Q ss_pred chhhHHHHhhhhhhcCCCcCHHHHHHHHHHHHHHHHHHHhhCCcccCCCCCCceEEcCCCCcEEEeeecCccccCCCCCC
Q 011138 217 ISETVYRVSKHYTRMNQHVPILYVQLYTYQICRALNYLHHVVGVCHRDIKPQNLLVNPHTHQLKICDFGSAKMLVPGEPN 296 (492)
Q Consensus 217 ~~~~l~~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~yLH~~~givHrDlKp~NILl~~~~~~vkL~DFG~a~~~~~~~~~ 296 (492)
++++-... .........+.......+.+.-+++++|||+ .-=+||| ||+..+. ..|..||+....+......
T Consensus 316 ~s~~rs~~-~~~~~se~~~~~~~~~~~~r~et~~l~~l~~-~~~~~~d----~~l~s~~--~~~~~~~~v~~~L~~~~~~ 387 (829)
T KOG0576|consen 316 CSTGRSSA-LEMTVSEIALEQYQFAYPLRKETRPLAELHS-SYKVHRD----NILGSEE--EVKLLDFAVPPQLTRTMKP 387 (829)
T ss_pred hcCCcccc-ccCChhhHhhhhhhhhhhhhhhccccccccc-ccccCcc----ccccccc--ccccccccCCcccCccccc
Confidence 98651000 0000011112223344455666789999997 4458998 8888754 5899999999877666566
Q ss_pred ccceeccCccCchhhcCCCCCCcchhhHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCCHHHHhhcCCCCcccCC
Q 011138 297 ISYICSRYYRAPELIFGATEYTTAIDMWSIGCVLAELLLGQPLFPGESGVDQLVEIIKILGTPTREEIKCMNPNYTEFKF 376 (492)
Q Consensus 297 ~~~~gt~~y~aPE~~~~~~~~~~~~DvwSlGvil~ell~G~~pf~~~~~~~~~~~i~~~~g~p~~~~~~~~~~~~~~~~~ 376 (492)
.+..+|+.++|||++.+.. +....|+|++|+--.+|.-|-+|-...- ...... . .....
T Consensus 388 ~t~~~~~~~~~pev~~~~~-~~~~p~~~~~~~~~~~~ap~~pPr~~P~----------------~~~~~~-g---~~p~s 446 (829)
T KOG0576|consen 388 RTAIGTPEPLAPEVIQENT-IDGCPDSGSLAVSAIQMAPGLPPRSSPP----------------AVLPMI-G---NGPNS 446 (829)
T ss_pred ccCCCCCCCCCchhhcccc-cccCCCccCCCcchhhcCCCCCCCCCCc----------------cccCCC-C---CCCCc
Confidence 7889999999999986554 8889999999988778888877764411 000000 0 00001
Q ss_pred CcccC-CCcccccCCCCChhHhhhhccccccCCCCcCCHHHhhCCCCCCCCCC
Q 011138 377 PQIKA-HPWHKIFHKRMPPEALDLVSRLLQYSPSLRCTALEACAHPFFDDLRD 428 (492)
Q Consensus 377 ~~~~~-~~~~~~~~~~~s~~~~~Li~~~L~~dP~~R~t~~e~l~Hp~f~~~~~ 428 (492)
+.+.. ..|...++ .++...|+..-|..|+....+|-|.+|....-
T Consensus 447 ~~L~~~~aw~~~~~-------~~~~~~~~~g~P~~pkv~mgacfsKvfngCpl 492 (829)
T KOG0576|consen 447 PMLTDKSAWSPVFH-------RDFPAPCLNGLPPTPKVHMGACFSKVFNGCPL 492 (829)
T ss_pred cccchhhhcCcccc-------cCCcccccCCCCCCCcchhhHHHHHHhccCcc
Confidence 11111 22322221 26889999999999999999999999987654
No 454
>PF06293 Kdo: Lipopolysaccharide kinase (Kdo/WaaP) family; InterPro: IPR010440 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases. Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. This entry represents lipopolysaccharide kinases which are related to protein kinases IPR000719 from INTERPRO. This family includes waaP (rfaP) gene product is required for the addition of phosphate to O-4 of the first heptose residue of the lipopolysaccharide (LPS) inner core region. It has previously been shown that WaaP is necessary for resistance to hydrophobic and polycationic antimicrobials in E. coli and that it is required for virulence in invasive strains of Salmonella enterica [].; GO: 0005524 ATP binding, 0016773 phosphotransferase activity, alcohol group as acceptor, 0009103 lipopolysaccharide biosynthetic process, 0016020 membrane
Probab=98.56 E-value=8.8e-07 Score=82.40 Aligned_cols=108 Identities=16% Similarity=0.257 Sum_probs=75.1
Q ss_pred HHHHHHHHHHcCCCCc--cccceeeeeccCCCceEEEEEeeechhh--HHHHhhhhhhcCCCcCHHHHHHHHHHHHHHHH
Q 011138 177 KNRELQIMRLLNHPNV--VSLKHCFFSTTEKDELYLNLVLEYISET--VYRVSKHYTRMNQHVPILYVQLYTYQICRALN 252 (492)
Q Consensus 177 ~~~E~~il~~l~h~nI--v~l~~~~~~~~~~~~~~~~lV~E~~~~~--l~~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~ 252 (492)
..+|...+..|..-.| ++.+.+...... .....+||+|++++. +...+... ...+......++.+++..+.
T Consensus 58 a~~E~~~~~~L~~~Gi~tP~pva~~~~r~~-~~~~s~lite~l~~~~~L~~~~~~~----~~~~~~~~~~ll~~l~~~i~ 132 (206)
T PF06293_consen 58 AKREWRNLQRLREAGIPTPEPVAYGERRKG-GGYRSYLITEALPGAQDLRDLLQQW----EQLDPSQRRELLRALARLIA 132 (206)
T ss_pred HHHHHHHHHHHHHcCCCCCcEEEEEEEcCC-CceeEEEEEEeCCCcccHHHHHHhh----cccchhhHHHHHHHHHHHHH
Confidence 4578888877764443 344444333221 224467999999873 44433321 11455667788999999999
Q ss_pred HHHhhCCcccCCCCCCceEEcCCC--CcEEEeeecCcccc
Q 011138 253 YLHHVVGVCHRDIKPQNLLVNPHT--HQLKICDFGSAKML 290 (492)
Q Consensus 253 yLH~~~givHrDlKp~NILl~~~~--~~vkL~DFG~a~~~ 290 (492)
-||. .||+|+|+++.|||++.+. ..+.|+||+.++..
T Consensus 133 ~lH~-~gi~H~Dl~~~NILv~~~~~~~~~~lIDld~~~~~ 171 (206)
T PF06293_consen 133 KLHD-AGIYHGDLNPSNILVDPDDGQYRFYLIDLDRMRFR 171 (206)
T ss_pred HHHH-CcCCCCCCCcccEEEeCCCCceeEEEEcchhceeC
Confidence 9997 9999999999999998764 35899999987643
No 455
>PRK09902 hypothetical protein; Provisional
Probab=98.52 E-value=3.1e-06 Score=77.74 Aligned_cols=139 Identities=13% Similarity=0.086 Sum_probs=94.0
Q ss_pred eccCCceEEEEEEEcCCCCEEEEEEecc----------chhhHHHHHHHHHHcCCCC--ccccceeeeeccCCCceEEEE
Q 011138 145 VGTGSFGVVFQAKCLETGDSVAIKKVLQ----------DKRYKNRELQIMRLLNHPN--VVSLKHCFFSTTEKDELYLNL 212 (492)
Q Consensus 145 lG~G~fg~Vy~~~~~~~g~~vAiK~~~~----------~~~~~~~E~~il~~l~h~n--Iv~l~~~~~~~~~~~~~~~~l 212 (492)
-|+||.+-|+.... .|+.+-+|.-.. ....+.+|...+..|..-+ ++++. ++-.........-+|
T Consensus 26 ~~rgG~SgV~r~~~--~g~~~ylKrq~nhl~~s~r~P~g~ptf~rE~~~L~~L~~~GvPVP~pv-f~~~~k~~~~~rA~L 102 (216)
T PRK09902 26 YRRNGMSGVQCVER--NGKKLYVKRMTHHLFHSVRYPFGRPTIVREVAVIKELERAGVIVPKIV-FGEAVKIEGEWRALL 102 (216)
T ss_pred cCCCCcceEEEEEe--CCcEEEEEeccCcccccccCCCCchHHHHHHHHHHHHHHcCCCCCccc-eeeeeccCCceEEEE
Confidence 46788888988654 345688886531 2344568999998886433 44443 221112223444679
Q ss_pred Eeeechh--hHHHHhhhhhhcCCCcCHHHHHHHHHHHHHHHHHHHhhCCcccCCCCCCceEEcCCCC-cEEEeeecCccc
Q 011138 213 VLEYISE--TVYRVSKHYTRMNQHVPILYVQLYTYQICRALNYLHHVVGVCHRDIKPQNLLVNPHTH-QLKICDFGSAKM 289 (492)
Q Consensus 213 V~E~~~~--~l~~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~yLH~~~givHrDlKp~NILl~~~~~-~vkL~DFG~a~~ 289 (492)
|+|-++| +|...+... .-...+......++.+|+..+.-||+ .|+.|+|+-+.|||++.++. .++++||--++.
T Consensus 103 VTe~L~g~~~L~~~l~~~--~~~~~~~~~k~~il~~va~~ia~LH~-~Gv~Hgdly~khIll~~~g~~~v~lIDlEk~r~ 179 (216)
T PRK09902 103 VTEDMAGFISIADWYAQH--AVSPYSDEVRQAMLKAVALAFKKMHS-VNRQHGCCYVRHIYVKTEGKAEAGFLDLEKSRR 179 (216)
T ss_pred EEEeCCCCccHHHHHhcC--CcCCcchHHHHHHHHHHHHHHHHHHH-CCCcCCCCCHhheeecCCCCeeEEEEEhhccch
Confidence 9998884 444433221 12244566667889999999999997 99999999999999986552 499999987653
No 456
>COG0661 AarF Predicted unusual protein kinase [General function prediction only]
Probab=98.49 E-value=3.1e-07 Score=95.92 Aligned_cols=134 Identities=22% Similarity=0.268 Sum_probs=82.2
Q ss_pred eeeccCCceEEEEEEEcCCCCEEEEEEeccch--------------------------------------------hhHH
Q 011138 143 RVVGTGSFGVVFQAKCLETGDSVAIKKVLQDK--------------------------------------------RYKN 178 (492)
Q Consensus 143 ~~lG~G~fg~Vy~~~~~~~g~~vAiK~~~~~~--------------------------------------------~~~~ 178 (492)
.-|+.++-|.||+|+.+ +|+.||||+...+- -...
T Consensus 131 ~PiAsASIaQVH~A~L~-sG~~VAVKVqrPgi~~~i~~DL~il~~~a~~~~~~~~~~~~l~~~~vv~e~~~~l~~ElDy~ 209 (517)
T COG0661 131 EPIASASIAQVHRAVLK-SGEEVAVKVQRPGIRERIEADLKLLRRLARLIKRLPPGGRRLDLVEVVDEFEKRLREELDYR 209 (517)
T ss_pred CchhhhhHhhheeEEec-CCCEEEEEecCCChHHHHHHHHHHHHHHHHHHHHcCCccccCChHHHHHHHHHHHHHHhCHH
Confidence 45899999999999954 59999999863221 0012
Q ss_pred HHHHHHHHcC----CCCccccceeeeeccCCCceEEEEEeeechhhHHHHhhhhhhcCCCcC-----HHHHHHHHHHHHH
Q 011138 179 RELQIMRLLN----HPNVVSLKHCFFSTTEKDELYLNLVLEYISETVYRVSKHYTRMNQHVP-----ILYVQLYTYQICR 249 (492)
Q Consensus 179 ~E~~il~~l~----h~nIv~l~~~~~~~~~~~~~~~~lV~E~~~~~l~~~~~~~~~~~~~~~-----~~~~~~i~~qi~~ 249 (492)
+|..-+.+++ ...-+++=.+|+.-.. .-.|+|||+.|--......... ..++ ...+..++.|++.
T Consensus 210 ~EA~n~~~~~~nf~~~~~v~VP~V~we~t~----~~VLtmE~i~Gi~i~d~~~l~~--~g~d~k~ia~~~~~~f~~q~~~ 283 (517)
T COG0661 210 REAANAERFRENFKDDPDVYVPKVYWEYTT----RRVLTMEWIDGIKISDIAALKS--AGIDRKELAELLVRAFLRQLLR 283 (517)
T ss_pred HHHHHHHHHHHHcCCCCCeEeceeehhccC----CcEEEEEeeCCEecccHHHHHh--cCCCHHHHHHHHHHHHHHHHHh
Confidence 4555555543 2222233334432221 1358999999843322221121 2233 2223333333332
Q ss_pred HHHHHHhhCCcccCCCCCCceEEcCCCCcEEEeeecCccccCC
Q 011138 250 ALNYLHHVVGVCHRDIKPQNLLVNPHTHQLKICDFGSAKMLVP 292 (492)
Q Consensus 250 aL~yLH~~~givHrDlKp~NILl~~~~~~vkL~DFG~a~~~~~ 292 (492)
.|+.|.|.+|.||+++.++ .+.+.|||+...+.+
T Consensus 284 --------dgffHaDpHpGNi~v~~~g-~i~~lDfGi~g~l~~ 317 (517)
T COG0661 284 --------DGFFHADPHPGNILVRSDG-RIVLLDFGIVGRLDP 317 (517)
T ss_pred --------cCccccCCCccceEEecCC-cEEEEcCcceecCCH
Confidence 5999999999999999998 799999999876543
No 457
>PF06176 WaaY: Lipopolysaccharide core biosynthesis protein (WaaY); InterPro: IPR009330 This family consists of several bacterial lipopolysaccharide core biosynthesis proteins (WaaY or RfaY). The waaY, waaQ, and waaP genes are located in the central operon of the waa (formerly rfa) locus on the chromosome of Escherichia coli. This locus contains genes whose products are involved in the assembly of the core region of the lipopolysaccharide molecule. WaaY is the enzyme that phosphorylates HepII in this system [].; GO: 0009244 lipopolysaccharide core region biosynthetic process
Probab=98.47 E-value=3.4e-06 Score=77.75 Aligned_cols=135 Identities=18% Similarity=0.228 Sum_probs=82.6
Q ss_pred ceeEeeeeccCCceEEEEEEEcCCCCEEEEEEeccchhh-------------HHHHHHHHHHcCCCCccccceeeeecc-
Q 011138 138 SYMAERVVGTGSFGVVFQAKCLETGDSVAIKKVLQDKRY-------------KNRELQIMRLLNHPNVVSLKHCFFSTT- 203 (492)
Q Consensus 138 ~y~~~~~lG~G~fg~Vy~~~~~~~g~~vAiK~~~~~~~~-------------~~~E~~il~~l~h~nIv~l~~~~~~~~- 203 (492)
.|.+.+++-......|.+.. -+|+.+.+|........ ..+++..+..+....+..+-+.|....
T Consensus 32 ~~~~~kv~k~~~r~~ValIe--i~~~kyIlK~pr~~~~r~er~~~sf~kg~~~~~l~~~~~~i~~~g~~~~~~~yl~~ek 109 (229)
T PF06176_consen 32 NYKIIKVFKNTKRNYVALIE--IDGKKYILKEPREENRRPERRFKSFFKGSEYSRLINNTDKIRNEGFTEPADPYLAAEK 109 (229)
T ss_pred CceEEEeecCCCccEEEEEE--ECCcEEEEeccchhhhhHHHHHHHHhccHHHHHHHHHHHHHHHcCccccccceeeeee
Confidence 57788888877777666654 37788999976432211 123444444443222222222221111
Q ss_pred --CCCceEEEEEeeechhhHHHHhhhhhhcCCCcCHHHHHHHHHHHHHHHHHHHhhCCcccCCCCCCceEEcCCCCcEEE
Q 011138 204 --EKDELYLNLVLEYISETVYRVSKHYTRMNQHVPILYVQLYTYQICRALNYLHHVVGVCHRDIKPQNLLVNPHTHQLKI 281 (492)
Q Consensus 204 --~~~~~~~~lV~E~~~~~l~~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~yLH~~~givHrDlKp~NILl~~~~~~vkL 281 (492)
..-....+|||||++|.-+.... .+++ .+...|..++.-||+ .|+.|+|..|.|++++.++ +++
T Consensus 110 k~~~~~~~~~ll~EYIeG~~l~d~~-------~i~e----~~~~ki~~~ikqlH~-~G~~HGD~hpgNFlv~~~~--i~i 175 (229)
T PF06176_consen 110 KIFRYTSSYVLLMEYIEGVELNDIE-------DIDE----DLAEKIVEAIKQLHK-HGFYHGDPHPGNFLVSNNG--IRI 175 (229)
T ss_pred eeccceeEEEEEEEEecCeecccch-------hcCH----HHHHHHHHHHHHHHH-cCCccCCCCcCcEEEECCc--EEE
Confidence 11122356899999985332111 1222 234567788999997 8999999999999999654 999
Q ss_pred eeecCcc
Q 011138 282 CDFGSAK 288 (492)
Q Consensus 282 ~DFG~a~ 288 (492)
+||+..+
T Consensus 176 ID~~~k~ 182 (229)
T PF06176_consen 176 IDTQGKR 182 (229)
T ss_pred EECcccc
Confidence 9998765
No 458
>COG1718 RIO1 Serine/threonine protein kinase involved in cell cycle control [Signal transduction mechanisms / Cell division and chromosome partitioning]
Probab=98.47 E-value=1.9e-06 Score=80.30 Aligned_cols=132 Identities=18% Similarity=0.176 Sum_probs=89.8
Q ss_pred eeccCCceEEEEEEEcCCCCEEEEEEeccchhh----------------------------HHHHHHHHHHcC--CCCcc
Q 011138 144 VVGTGSFGVVFQAKCLETGDSVAIKKVLQDKRY----------------------------KNRELQIMRLLN--HPNVV 193 (492)
Q Consensus 144 ~lG~G~fg~Vy~~~~~~~g~~vAiK~~~~~~~~----------------------------~~~E~~il~~l~--h~nIv 193 (492)
.|.+|--+.||+|.. .++..+|+|++...... .++|..-|+++. +=.+.
T Consensus 55 ~istGKEA~Vy~a~~-~~~~~~avKiyr~~t~~fk~~~~Yi~gd~Rf~~~~~~rr~lv~~W~~kEf~NL~R~~eAGVrvP 133 (268)
T COG1718 55 CISTGKEANVYLAET-GDGRYVAVKIYRTSTSEFKRIRRYIQGDPRFRNSRSNRRKLVFAWARKEFRNLKRAYEAGVRVP 133 (268)
T ss_pred eecCCcceEEEeecc-CCCceEEEEEEehhhhhhhhHHHHHhcChhhhcCCCCHHHHHHHHHHHHHHHHHHHHHcCCCCC
Confidence 688899999999974 67899999987432111 125777777774 34455
Q ss_pred ccceeeeeccCCCceEEEEEeeechhhHHHHhhhhhhcCCCcCHHHHHHHHHHHHHHHHHHHhhCCcccCCCCCCceEEc
Q 011138 194 SLKHCFFSTTEKDELYLNLVLEYISETVYRVSKHYTRMNQHVPILYVQLYTYQICRALNYLHHVVGVCHRDIKPQNLLVN 273 (492)
Q Consensus 194 ~l~~~~~~~~~~~~~~~~lV~E~~~~~l~~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~yLH~~~givHrDlKp~NILl~ 273 (492)
+-+.++ . -.|||||++....- .=....-.+...++..+..+++..+.-|-...|+||+||..-|||+.
T Consensus 134 ~Pi~~~-----~----nVLvMEfIg~~g~p---AP~LkDv~~e~~e~~~~~~~~v~~~~~l~~~a~LVHgDLSEyNiL~~ 201 (268)
T COG1718 134 EPIAFR-----N----NVLVMEFIGDDGLP---APRLKDVPLELEEAEGLYEDVVEYMRRLYKEAGLVHGDLSEYNILVH 201 (268)
T ss_pred Cceeec-----C----CeEEEEeccCCCCC---CCCcccCCcCchhHHHHHHHHHHHHHHHHHhcCcccccchhhheEEE
Confidence 555544 1 35899999864111 00000112223357777788888888776437999999999999999
Q ss_pred CCCCcEEEeeecCcccc
Q 011138 274 PHTHQLKICDFGSAKML 290 (492)
Q Consensus 274 ~~~~~vkL~DFG~a~~~ 290 (492)
++ .+.|+|||-|...
T Consensus 202 -~~-~p~iID~~QaV~~ 216 (268)
T COG1718 202 -DG-EPYIIDVSQAVTI 216 (268)
T ss_pred -CC-eEEEEECcccccc
Confidence 44 6999999988654
No 459
>KOG1035 consensus eIF-2alpha kinase GCN2 [Translation, ribosomal structure and biogenesis]
Probab=98.41 E-value=1.6e-06 Score=95.49 Aligned_cols=205 Identities=20% Similarity=0.277 Sum_probs=131.5
Q ss_pred HHHHHHHHHHcCCCCccccceeeeeccCCCceEEEEEeeechhh-HHHHhhhhhhcCCCcCHHHHHHHHHHHHHHHHHHH
Q 011138 177 KNRELQIMRLLNHPNVVSLKHCFFSTTEKDELYLNLVLEYISET-VYRVSKHYTRMNQHVPILYVQLYTYQICRALNYLH 255 (492)
Q Consensus 177 ~~~E~~il~~l~h~nIv~l~~~~~~~~~~~~~~~~lV~E~~~~~-l~~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~yLH 255 (492)
.+-|...+..+.|+|++.++.+-+.....+ ..+.+..++|... +...+ ..-..++...++.+..+++.||.|+|
T Consensus 229 ~E~e~~~l~k~~~~n~~~~~~~~le~~~~g-~~~~v~~~~~s~~~~~~~~----q~v~~i~~~~~r~~~~~~~~GL~~~h 303 (1351)
T KOG1035|consen 229 TEIELESLSKIAHDNLGGYFVYGLERLFRG-IVLDVLQEICSKVELRSLL----QSVGSIPLETLRILHQKLLEGLAYLH 303 (1351)
T ss_pred HHHHHHHHHhhccccccceeEEeehhhcch-HHHHHHHhhcCccchHHHH----hhccccCHHHHHHHHHHHhhhHHHHH
Confidence 345777788889999999887664433222 1222334555532 22222 22356788889999999999999999
Q ss_pred hhCCcccCCCCCC---ceEEcCCCCcEEEe--eecCccccCCCCCCccceeccCccCchhhcCCCCCCc--chhhHHHHH
Q 011138 256 HVVGVCHRDIKPQ---NLLVNPHTHQLKIC--DFGSAKMLVPGEPNISYICSRYYRAPELIFGATEYTT--AIDMWSIGC 328 (492)
Q Consensus 256 ~~~givHrDlKp~---NILl~~~~~~vkL~--DFG~a~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~--~~DvwSlGv 328 (492)
+ ....|.-|... +..++.++ .+.++ ||+..+.............+..+.++|...... +.. ..|+|.+|.
T Consensus 304 ~-~~l~~v~L~~s~~~~~~~~~e~-~~~~sl~~~~ss~~l~d~~~~~~~~~~~~~~~~e~~~~~~-~~~~r~~dL~~lgl 380 (1351)
T KOG1035|consen 304 S-LSLEHVVLSASSSKESTVDGEG-VVAISLSDFDSSKPLPDNEKSFSDLLAEIRNADEDLKENT-AKKSRLTDLWCLGL 380 (1351)
T ss_pred H-hccceeEEecccccccccCccc-eeecchhhhcccccCCCcccchhhcCcccccccccccccc-chhhhhhHHHHHHH
Confidence 7 54433333332 22223333 45565 888887776655555666777888999875432 333 469999999
Q ss_pred HHHHHHhCCCCCCCCChHHHHHHHHHHhCCCCHHHHhhcCCCCcccCCCcccCCCcccccCCCCChhHhhhhccccccCC
Q 011138 329 VLAELLLGQPLFPGESGVDQLVEIIKILGTPTREEIKCMNPNYTEFKFPQIKAHPWHKIFHKRMPPEALDLVSRLLQYSP 408 (492)
Q Consensus 329 il~ell~G~~pf~~~~~~~~~~~i~~~~g~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~Li~~~L~~dP 408 (492)
.+..+..|..+-... ..+... ++........+++.+|+.-++
T Consensus 381 l~~~~~~~~~i~~~~------~~~~~~--------------------------------l~~~~~~~~~d~~~~~~~~~~ 422 (1351)
T KOG1035|consen 381 LLLQLSQGEDISEKS------AVPVSL--------------------------------LDVLSTSELLDALPKCLDEDS 422 (1351)
T ss_pred HHhhhhhcCcccccc------cchhhh--------------------------------hccccchhhhhhhhhhcchhh
Confidence 999999876332110 000000 000111267899999999999
Q ss_pred CCcCCHHHhhCCCCCCCCC
Q 011138 409 SLRCTALEACAHPFFDDLR 427 (492)
Q Consensus 409 ~~R~t~~e~l~Hp~f~~~~ 427 (492)
++|+++.+++.|+|.+--.
T Consensus 423 ~~Rl~~~~ll~~~f~~~~~ 441 (1351)
T KOG1035|consen 423 EERLSALELLTHPFLRFPT 441 (1351)
T ss_pred hhccchhhhhhchhccccc
Confidence 9999999999999987543
No 460
>PF01636 APH: Phosphotransferase enzyme family This family is part of the larger protein kinase superfamily.; InterPro: IPR002575 This entry consists of bacterial antibiotic resistance proteins, which confer resistance to various aminoglycosides they include:- aminoglycoside 3'-phosphotransferase or kanamycin kinase / neomycin-kanamycin phosphotransferase and streptomycin 3''-kinase or streptomycin 3''-phosphotransferase. The aminoglycoside phosphotransferases inactivate aminoglycoside antibiotics via phosphorylation []. The proteins are found in a range of taxonomic groups.; PDB: 2PPQ_A 2Q83_B 3TDV_B 3TDW_A 3I0O_A 3I0Q_A 3I1A_B 3Q2M_A 3HAV_C 2PUI_B ....
Probab=98.32 E-value=6.1e-06 Score=77.70 Aligned_cols=75 Identities=19% Similarity=0.170 Sum_probs=50.7
Q ss_pred eeeeccCCceEEEEEEEcCCCCEEEEEEeccc--hhhHHHHHHHHHHcCCCC--ccccceeeeeccCCCceEEEEEeeec
Q 011138 142 ERVVGTGSFGVVFQAKCLETGDSVAIKKVLQD--KRYKNRELQIMRLLNHPN--VVSLKHCFFSTTEKDELYLNLVLEYI 217 (492)
Q Consensus 142 ~~~lG~G~fg~Vy~~~~~~~g~~vAiK~~~~~--~~~~~~E~~il~~l~h~n--Iv~l~~~~~~~~~~~~~~~~lV~E~~ 217 (492)
.+.|+.|..+.||++.... ..+++|..... .....+|..+++.+.... +.+++.+... .......+++|+++
T Consensus 2 i~~l~~G~~n~~~~v~~~~--~~~vlK~~~~~~~~~~~~~e~~~~~~l~~~~~pvP~~~~~~~~--~~~~~~~~~~~~~i 77 (239)
T PF01636_consen 2 IRPLSGGFSNRVYRVTTDD--GRYVLKFYRPPDAAERLRREAAVLRQLAEHGIPVPRVLAFDTS--DEFNGFPYLLMEYI 77 (239)
T ss_dssp EEEEEESSSSEEEEEEETT--SEEEEEEESSHHHHHHHHHHHHHHHHHHHTTSBS--EEEEEEE--TEETSEEEEEEEEE
T ss_pred CccCCCCCeeeEEEEEECC--cEEEEEEeCCCCCHHHHHHHHHHHHHHHhcCCCCceEEeeccc--ccccccceEEEEEe
Confidence 3568999999999998643 58999987655 345568999998886433 4566553312 12233478999999
Q ss_pred hhh
Q 011138 218 SET 220 (492)
Q Consensus 218 ~~~ 220 (492)
+|.
T Consensus 78 ~g~ 80 (239)
T PF01636_consen 78 PGR 80 (239)
T ss_dssp SSE
T ss_pred ccc
Confidence 864
No 461
>KOG1235 consensus Predicted unusual protein kinase [General function prediction only]
Probab=98.25 E-value=4.9e-06 Score=86.74 Aligned_cols=139 Identities=16% Similarity=0.211 Sum_probs=80.3
Q ss_pred eeeccCCceEEEEEEEcCCCCEEEEEEeccchhh-----------------------------------------HHHHH
Q 011138 143 RVVGTGSFGVVFQAKCLETGDSVAIKKVLQDKRY-----------------------------------------KNREL 181 (492)
Q Consensus 143 ~~lG~G~fg~Vy~~~~~~~g~~vAiK~~~~~~~~-----------------------------------------~~~E~ 181 (492)
+-||..+.|.||+|+.+ +|+.||||+-+.+-+. +.+|.
T Consensus 167 ~piaaASlaQVhrA~L~-~G~~VaVKVQ~P~l~~~~~~Dl~~~~~~~~~l~k~~p~~~~~~lvdE~~~~L~~ELDF~~EA 245 (538)
T KOG1235|consen 167 EPIAAASLAQVHRARLK-NGEDVAVKVQHPGLEKLIMLDLRNLRLLAKVLQKFFPDFDLVWLVDEIAKSLPQELDFTKEA 245 (538)
T ss_pred chhhhcchhheEEEEec-CCCEEEEEecCcChHHHHHHHHHHHHHHHHHHHHhCcCCchhhHHHHHHhhhHhhcchHHHH
Confidence 56999999999999855 5999999975322100 01233
Q ss_pred HH----HHHcCCCC---ccccceeeeeccCCCceEEEEEeeechhhHHHHhhhhhhcCCCcCHHHHHHHHHHHHHHHHHH
Q 011138 182 QI----MRLLNHPN---VVSLKHCFFSTTEKDELYLNLVLEYISETVYRVSKHYTRMNQHVPILYVQLYTYQICRALNYL 254 (492)
Q Consensus 182 ~i----l~~l~h~n---Iv~l~~~~~~~~~~~~~~~~lV~E~~~~~l~~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~yL 254 (492)
+- .+.+.|-+ -|.+=.+|+.... .-.|+||||+|.-.+.+..... ..++...+...+.+...-+ -+
T Consensus 246 ~Nae~~~~~f~~~~~~~~V~VP~Vy~~~st----~RVLtME~~~G~~i~Dl~~i~~--~gi~~~~i~~~l~~~~~~q-If 318 (538)
T KOG1235|consen 246 KNAERFRENFKDFSLLTYVLVPKVYWDLST----KRVLTMEYVDGIKINDLDAIDK--RGISPHDILNKLVEAYLEQ-IF 318 (538)
T ss_pred HhHHHHHHHHHhcccccceeCCeehhhcCc----ceEEEEEecCCccCCCHHHHHH--cCCCHHHHHHHHHHHHHHH-HH
Confidence 32 33344555 1222233322211 2459999999843332222222 2344443332222221111 11
Q ss_pred HhhCCcccCCCCCCceEEcC---CCCcEEEeeecCccccC
Q 011138 255 HHVVGVCHRDIKPQNLLVNP---HTHQLKICDFGSAKMLV 291 (492)
Q Consensus 255 H~~~givHrDlKp~NILl~~---~~~~vkL~DFG~a~~~~ 291 (492)
+ .|++|+|=.|.||++++ .+..+.+-|||+...+.
T Consensus 319 ~--~GffHaDPHPGNilv~~~~~~~~~ivllDhGl~~~is 356 (538)
T KOG1235|consen 319 K--TGFFHADPHPGNILVRPNPEGDEEIVLLDHGLYAVIS 356 (538)
T ss_pred h--cCCccCCCCCCcEEEecCCCCCccEEEEccccccccc
Confidence 2 59999999999999984 34589999999987653
No 462
>TIGR02172 Fb_sc_TIGR02172 Fibrobacter succinogenes paralogous family TIGR02172. This model describes a paralogous family of five proteins, likely to be enzymes, in the rumen bacterium Fibrobacter succinogenes S85. Members show homology to proteins described by PFAM model pfam01636, a phosphotransferase enzyme family associated with resistance to aminoglycoside antibiotics. However, members of this family score below the current trusted and noise cutoffs for pfam01636.
Probab=98.15 E-value=2.4e-05 Score=73.82 Aligned_cols=69 Identities=19% Similarity=0.155 Sum_probs=46.8
Q ss_pred eeeccCCceEEEEEEEcCCCCEEEEEEeccc--hhhHHHHHHHHHHcCCCCc--cccceeeeeccCCCceEEEEEeeech
Q 011138 143 RVVGTGSFGVVFQAKCLETGDSVAIKKVLQD--KRYKNRELQIMRLLNHPNV--VSLKHCFFSTTEKDELYLNLVLEYIS 218 (492)
Q Consensus 143 ~~lG~G~fg~Vy~~~~~~~g~~vAiK~~~~~--~~~~~~E~~il~~l~h~nI--v~l~~~~~~~~~~~~~~~~lV~E~~~ 218 (492)
..||+|..+.||+. .|..+++|..... .....+|.++++.+..-.+ .+.+++. .+.....+|||+++
T Consensus 7 ~~i~~G~t~~~y~~----~~~~~VlR~~~~~~~~~~i~~E~~~l~~l~~~glpvP~~~~~~-----~~~~~~glv~e~i~ 77 (226)
T TIGR02172 7 TQTGEGGNGESYTH----KTGKWMLKLYNPGFDKETIKREFDASRKVFSLGIPTPHPFDLV-----EDGGRLGLIYELIV 77 (226)
T ss_pred eeecCCCCcceeEe----cCCCEEEEeCCCCCCHHHHHHHHHHHHHHHHcCCCCCceEEEE-----ecCCeeeeeeeecC
Confidence 35899999999984 2556778876542 2345789999998864433 4554443 22333678999998
Q ss_pred hh
Q 011138 219 ET 220 (492)
Q Consensus 219 ~~ 220 (492)
|.
T Consensus 78 G~ 79 (226)
T TIGR02172 78 GK 79 (226)
T ss_pred Cc
Confidence 84
No 463
>PLN02876 acyl-CoA dehydrogenase
Probab=98.02 E-value=6.9e-05 Score=84.12 Aligned_cols=77 Identities=18% Similarity=0.207 Sum_probs=50.5
Q ss_pred eeeeccCCceEEEEEEEcCCC--CEEEEEEecc-----chhhHHHHHHHHHHcC-CCCc--cccceeeeeccCCCceEEE
Q 011138 142 ERVVGTGSFGVVFQAKCLETG--DSVAIKKVLQ-----DKRYKNRELQIMRLLN-HPNV--VSLKHCFFSTTEKDELYLN 211 (492)
Q Consensus 142 ~~~lG~G~fg~Vy~~~~~~~g--~~vAiK~~~~-----~~~~~~~E~~il~~l~-h~nI--v~l~~~~~~~~~~~~~~~~ 211 (492)
.+.|+.|.++.+|+......+ ..+++|+... ......+|..+|+.+. |.+| .+++.++... ......|
T Consensus 43 v~~l~gG~sn~ty~l~~~~~~~~~~~VLR~~p~~~~~~~~~~~~rE~~~l~~L~~~~~vpVP~v~~~~~d~--~v~G~~f 120 (822)
T PLN02876 43 VSQFGHGQSNPTFLLEVGNGGSVKRYVLRKKPPGKLLQSAHAVEREYQVLRALGEHTDVPVPKVYCLCTDA--SVIGTAF 120 (822)
T ss_pred EEEeCCCCcCceEEEEECCCCcceeEEEEeCCCCccCccHHHHHHHHHHHHHHhhcCCCCCCcEEEEecCC--CcCCCce
Confidence 356899999999998764332 3677776532 2345678999999996 6665 5555444211 1122357
Q ss_pred EEeeechhh
Q 011138 212 LVLEYISET 220 (492)
Q Consensus 212 lV~E~~~~~ 220 (492)
+||||++|.
T Consensus 121 lVME~v~G~ 129 (822)
T PLN02876 121 YIMEYLEGR 129 (822)
T ss_pred EEEEecCCc
Confidence 999999875
No 464
>PF13095 FTA2: Kinetochore Sim4 complex subunit FTA2
Probab=98.02 E-value=4.4e-05 Score=69.63 Aligned_cols=126 Identities=24% Similarity=0.308 Sum_probs=87.8
Q ss_pred cceeEeeeeccCCc-eEEEEEEEcCCCCEEEEEEecc---------------ch----------hhHHHHHHHHHHc---
Q 011138 137 ISYMAERVVGTGSF-GVVFQAKCLETGDSVAIKKVLQ---------------DK----------RYKNRELQIMRLL--- 187 (492)
Q Consensus 137 ~~y~~~~~lG~G~f-g~Vy~~~~~~~g~~vAiK~~~~---------------~~----------~~~~~E~~il~~l--- 187 (492)
.+++..+.||.|.- |.||+++. .|..||+|.+.. .. .-+..|.+..-+|
T Consensus 37 ~~I~flefLg~g~~~~~V~kv~I--~g~~YALKlf~~~~~~~~~~~~~~~~~~~~~~~~~~~y~~PF~~ECRAfgRLke~ 114 (207)
T PF13095_consen 37 DDIEFLEFLGHGSHDGYVFKVEI--DGRIYALKLFRFWDYTEPDYTRERFAGHETSLSTPAHYADPFNCECRAFGRLKEA 114 (207)
T ss_pred CcEeeeeecCCCCceeEEEEEEE--CCeEEEEEEeeccccCCCccccccccccccccchhhhhcChHHHHHHhhHHHHhc
Confidence 35888899999999 99999986 788999998311 00 1123466655444
Q ss_pred CCCCc--cccceeeeeccC-------------CCceEEEEEeeechhhHHHHhhhhhhcCCCcCHHHHHHHHHHHHHHHH
Q 011138 188 NHPNV--VSLKHCFFSTTE-------------KDELYLNLVLEYISETVYRVSKHYTRMNQHVPILYVQLYTYQICRALN 252 (492)
Q Consensus 188 ~h~nI--v~l~~~~~~~~~-------------~~~~~~~lV~E~~~~~l~~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~ 252 (492)
.+.++ |++++++....+ .......||.||+.... .+. ..-+.+|++-|.
T Consensus 115 ~~e~~~Avkc~Gyl~L~~~~q~~~~~~~~~~~~~~~~~aIVKD~v~~~~------------~~~----~~~~~~~~~dl~ 178 (207)
T PF13095_consen 115 GREGLWAVKCHGYLLLTEDQQFEQLRQRGSDHRPLPIRAIVKDFVPDDP------------PLQ----IRDIPQMLRDLK 178 (207)
T ss_pred cccCceEEEeeEEEEEchHHHHHHhhcccccCCCCccEEEEEeecCCcc------------ccc----hhHHHHHHHHHH
Confidence 56677 899998865521 11223468888877542 111 122458889999
Q ss_pred HHHhhCCcccCCCCCCceEEcCCCCcEEEeeecCc
Q 011138 253 YLHHVVGVCHRDIKPQNLLVNPHTHQLKICDFGSA 287 (492)
Q Consensus 253 yLH~~~givHrDlKp~NILl~~~~~~vkL~DFG~a 287 (492)
.+|. .||+-+|+|+.|.. + -||+|||.+
T Consensus 179 ~~~k-~gI~~~Dv~~~ny~---~---G~lvDfs~~ 206 (207)
T PF13095_consen 179 ILHK-LGIVPRDVKPRNYR---G---GKLVDFSSS 206 (207)
T ss_pred HHHH-CCeeeccCcccccc---C---CEEEecccC
Confidence 9997 89999999999985 3 389999964
No 465
>COG2112 Predicted Ser/Thr protein kinase [Signal transduction mechanisms]
Probab=97.99 E-value=4e-05 Score=67.79 Aligned_cols=126 Identities=23% Similarity=0.308 Sum_probs=82.4
Q ss_pred eEeeeeccCCceEEEEEEEcCCCCEEEEEEeccc--hhhHHHHHHHHHHcCCCCcc-ccceeeeeccCCCceEEEEEeee
Q 011138 140 MAERVVGTGSFGVVFQAKCLETGDSVAIKKVLQD--KRYKNRELQIMRLLNHPNVV-SLKHCFFSTTEKDELYLNLVLEY 216 (492)
Q Consensus 140 ~~~~~lG~G~fg~Vy~~~~~~~g~~vAiK~~~~~--~~~~~~E~~il~~l~h~nIv-~l~~~~~~~~~~~~~~~~lV~E~ 216 (492)
...+.||+|.+|.||+|.+ .|..+|+|+-..+ ...++.|+++|..+.-.++- ++|.+- + .++.|||
T Consensus 25 ~v~~~L~KG~~s~Vyl~~~--~~~~~a~Kvrr~ds~r~~l~kEakiLeil~g~~~~p~vy~yg-----~----~~i~me~ 93 (201)
T COG2112 25 RVEKELAKGTTSVVYLGEW--RGGEVALKVRRRDSPRRNLEKEAKILEILAGEGVTPEVYFYG-----E----DFIRMEY 93 (201)
T ss_pred hhhhhhhcccccEEEEeec--cCceEEEEEecCCcchhhHHHHHHHHHHhhhcCCCceEEEec-----h----hhhhhhh
Confidence 3457899999999999987 5779999977554 35567899999998865553 333221 1 2356999
Q ss_pred chhhHHHHhhhhhhcCCCcCHHHHHHHHHHHHHHHHHHHhhCCcccCCCCC-C-ceEEcCCCCcEEEeeecCccc
Q 011138 217 ISETVYRVSKHYTRMNQHVPILYVQLYTYQICRALNYLHHVVGVCHRDIKP-Q-NLLVNPHTHQLKICDFGSAKM 289 (492)
Q Consensus 217 ~~~~l~~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~yLH~~~givHrDlKp-~-NILl~~~~~~vkL~DFG~a~~ 289 (492)
+.|--+..... . .. +.-+..++..---|-. .||-|..|.- . ||+++ ++ .+.|+||..|+.
T Consensus 94 i~G~~L~~~~~--~----~~----rk~l~~vlE~a~~LD~-~GI~H~El~~~~k~vlv~-~~-~~~iIDFd~At~ 155 (201)
T COG2112 94 IDGRPLGKLEI--G----GD----RKHLLRVLEKAYKLDR-LGIEHGELSRPWKNVLVN-DR-DVYIIDFDSATF 155 (201)
T ss_pred hcCcchhhhhh--c----cc----HHHHHHHHHHHHHHHH-hccchhhhcCCceeEEec-CC-cEEEEEccchhh
Confidence 99843321111 0 01 1223355555444444 7999998863 3 56665 44 699999999974
No 466
>cd05150 APH Aminoglycoside 3'-phosphotransferase (APH). The APH subfamily is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). APH catalyzes the transfer of the gamma-phosphoryl group from ATP to aminoglycoside antibiotics such as kanamycin, streptomycin, neomycin, and gentamicin, among others. The aminoglycoside antibiotics target the 30S ribosome and promote miscoding, leading to the production of defective proteins which insert into the bacterial membrane, resulting in membrane damage and the ultimate demise of the bacterium. Phosphorylation of the aminoglycoside antibiotics results in their inactivation, leading to bacterial antibiotic resistance. The APH gene is found on transposons and plasmids and is thought to have originated as a self-defense mechanism used by microorganisms that produce the antibio
Probab=97.91 E-value=0.0001 Score=70.38 Aligned_cols=66 Identities=15% Similarity=0.045 Sum_probs=41.7
Q ss_pred CceEEEEEEEcCCCCEEEEEEeccc-hhhHHHHHHHHHHcC-CCCccccceeeeeccCCCceEEEEEeeechhhH
Q 011138 149 SFGVVFQAKCLETGDSVAIKKVLQD-KRYKNRELQIMRLLN-HPNVVSLKHCFFSTTEKDELYLNLVLEYISETV 221 (492)
Q Consensus 149 ~fg~Vy~~~~~~~g~~vAiK~~~~~-~~~~~~E~~il~~l~-h~nIv~l~~~~~~~~~~~~~~~~lV~E~~~~~l 221 (492)
.-..||+... .+..+.+|+.... .....+|+.+++.+. +--+.+++++.. ....-++|||+++|..
T Consensus 11 ~~~~v~~~~~--~~~~~~vk~~~~~~~~~~~~E~~~l~~l~~~~~vP~v~~~~~-----~~~~~~lv~e~i~G~~ 78 (244)
T cd05150 11 SGATVYRLDG--KNPGLYLKIAPSGPTYELEREAERLRWLAGKLPVPEVIDYGS-----DDGRAWLLTSAVPGVP 78 (244)
T ss_pred CcCeEEEEcC--CCCcEEEEecCCCcccchHHHHHHHHHHHhcCCCCeEEEEEe-----cCCccEEEEEeeCCcc
Confidence 3378898864 3467888876432 134567999998885 333445555442 1123568999998753
No 467
>PF10707 YrbL-PhoP_reg: PhoP regulatory network protein YrbL; InterPro: IPR019647 This entry represents proteins that are activated by the protein PhoP. PhoP controls the expression of a large number of genes that mediate adaptation to low Mg2+ environments and/or virulence in several bacterial species. YbrL is proposed to be acting in a loop activity with PhoP and PrmA analogous to the multi-component loop in Salmonella sp., where the PhoP-dependent PmrD protein activates the regulatory protein PmrA, and the activated PmrA then represses transcription from the PmrD promoter which harbours binding sites for both the PhoP and PmrA proteins. Expression of YrbL is induced in low Mg2+ in a PhoP-dependent fashion and repressed by Fe3+ in a PmrA-dependent manner [].
Probab=97.67 E-value=0.00066 Score=62.38 Aligned_cols=131 Identities=20% Similarity=0.307 Sum_probs=83.0
Q ss_pred eeeccCCceEEEEEEEcCCCCEEEEEEeccch--------------------hhHHHHHHHHHHcC------CCCccccc
Q 011138 143 RVVGTGSFGVVFQAKCLETGDSVAIKKVLQDK--------------------RYKNRELQIMRLLN------HPNVVSLK 196 (492)
Q Consensus 143 ~~lG~G~fg~Vy~~~~~~~g~~vAiK~~~~~~--------------------~~~~~E~~il~~l~------h~nIv~l~ 196 (492)
..||+|+.-.||.-- ......||+..... ....+|+.-...+. +.+|.+++
T Consensus 7 ~~i~~G~~R~cy~HP---~dp~~cIKV~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~E~~~y~~l~~~~~~~~~~i~r~~ 83 (199)
T PF10707_consen 7 DLIAQGGERDCYQHP---DDPNLCIKVMRPDRGERRRPFKRWLKRLRPKSRYRQNRRELRYYKQLSLRRGVDWSHIPRFY 83 (199)
T ss_pred cccccCCCceEEECC---CCCCeEEEEEccccccccccchhHHHhhcccchhHHHHHHHHHHHHHhhccCCcccccccEe
Confidence 469999999998643 44557889876554 44456777777666 78899999
Q ss_pred eeeeeccCCCceEEEEEeeech---hhHHHHhhhhhhcCCCcCHHHHHHHHHHHHHHHHHHHhhCCcccCCCCCCceEEc
Q 011138 197 HCFFSTTEKDELYLNLVLEYIS---ETVYRVSKHYTRMNQHVPILYVQLYTYQICRALNYLHHVVGVCHRDIKPQNLLVN 273 (492)
Q Consensus 197 ~~~~~~~~~~~~~~~lV~E~~~---~~l~~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~yLH~~~givHrDlKp~NILl~ 273 (492)
++..+.. -..+|+|.+. |..-..+..+.. ...++. . +...+-.-..||-+ .+|+.+||+|.||++.
T Consensus 84 G~veT~~-----G~Glv~e~I~d~dG~~s~TL~~~l~-~~~~~~-~---~~~~L~~f~~~l~~-~~Iv~~dl~~~NIv~~ 152 (199)
T PF10707_consen 84 GFVETNL-----GLGLVVELIRDADGNISPTLEDYLK-EGGLTE-E---LRQALDEFKRYLLD-HHIVIRDLNPHNIVVQ 152 (199)
T ss_pred EEEecCC-----ceEEEEEEEECCCCCcCccHHHHHH-cCCccH-H---HHHHHHHHHHHHHH-cCCeecCCCcccEEEE
Confidence 9874433 2667888764 221111112221 233444 2 23344455567776 8999999999999995
Q ss_pred CCC--C-cEEEee-ecCc
Q 011138 274 PHT--H-QLKICD-FGSA 287 (492)
Q Consensus 274 ~~~--~-~vkL~D-FG~a 287 (492)
... . .+.|+| ||..
T Consensus 153 ~~~~~~~~lvlIDG~G~~ 170 (199)
T PF10707_consen 153 RRDSGEFRLVLIDGLGEK 170 (199)
T ss_pred ecCCCceEEEEEeCCCCc
Confidence 432 2 467777 5543
No 468
>cd05155 APH_ChoK_like_1 Uncharacterized bacterial proteins with similarity to Aminoglycoside 3'-phosphotransferase (APH) and Choline kinase (ChoK) family members. The APH/ChoK subfamily is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). This family is composed of APH, ChoK, ethanolamine kinase (ETNK), macrolide 2'-phosphotransferase (MPH2'), an unusual homoserine kinase, and uncharacterized proteins with similarity to the N-terminal domain of acyl-CoA dehydrogenase 10 (ACAD10). The members of this family catalyze the transfer of the gamma-phosphoryl group from ATP (or CTP) to small molecule substrates, such as aminoglycosides, macrolides, choline, ethanolamine, and homoserine. Phosphorylation of the antibiotics, aminoglycosides, and macrolides leads to their inactivation and to bacterial antibiotic resista
Probab=97.65 E-value=0.0004 Score=65.87 Aligned_cols=30 Identities=33% Similarity=0.421 Sum_probs=24.9
Q ss_pred CCcccCCCCCCceEEcCCCCcEEEeeecCcc
Q 011138 258 VGVCHRDIKPQNLLVNPHTHQLKICDFGSAK 288 (492)
Q Consensus 258 ~givHrDlKp~NILl~~~~~~vkL~DFG~a~ 288 (492)
.+++|+|+.|.|||++.++ ..-|+||+.+.
T Consensus 164 ~~l~HGD~~~~Nvlv~~~~-i~giIDw~~a~ 193 (235)
T cd05155 164 PVWFHGDLAPGNLLVQDGR-LSAVIDFGCLG 193 (235)
T ss_pred ceEEeCCCCCCcEEEECCC-EEEEEeCcccC
Confidence 3589999999999998554 45799999875
No 469
>PRK09550 mtnK methylthioribose kinase; Reviewed
Probab=97.56 E-value=0.00092 Score=68.07 Aligned_cols=70 Identities=24% Similarity=0.320 Sum_probs=47.0
Q ss_pred eeeccCCceEEEEEEEcCCCCEEEEEEecc-----------chhhHHHHHHHHHHcC---CCCccccceeeeeccCCCce
Q 011138 143 RVVGTGSFGVVFQAKCLETGDSVAIKKVLQ-----------DKRYKNRELQIMRLLN---HPNVVSLKHCFFSTTEKDEL 208 (492)
Q Consensus 143 ~~lG~G~fg~Vy~~~~~~~g~~vAiK~~~~-----------~~~~~~~E~~il~~l~---h~nIv~l~~~~~~~~~~~~~ 208 (492)
+.||.|.+..||++.+...++.|.||.-.. .......|.+.|+.+. -.++++++++- . .
T Consensus 32 ~elggGn~N~VyrV~~~~g~~svIVKqa~p~~r~~g~~wpl~~eR~~~Eae~L~~l~~~~p~~VPkV~~~D-----~--~ 104 (401)
T PRK09550 32 REIGDGNLNLVFRVSDTEGGKSVIVKQALPYVRVVGESWPLTLDRARIEAEALKIQAKYVPDLVPKVYHYD-----E--E 104 (401)
T ss_pred eEcCCCceEEEEEEEeCCCCeEEEEEecCcccccccccccccHHHHHHHHHHHHHHHhhCCCCCCeEEEEC-----C--C
Confidence 569999999999999754335899997421 1122346888888763 34577776642 2 1
Q ss_pred EEEEEeeechh
Q 011138 209 YLNLVLEYISE 219 (492)
Q Consensus 209 ~~~lV~E~~~~ 219 (492)
..++||||+++
T Consensus 105 ~~~lVME~L~~ 115 (401)
T PRK09550 105 LAVTVMEDLSD 115 (401)
T ss_pred CCEEEEecCCC
Confidence 24589999874
No 470
>KOG2268 consensus Serine/threonine protein kinase [Signal transduction mechanisms; General function prediction only]
Probab=97.55 E-value=9.8e-05 Score=71.37 Aligned_cols=129 Identities=16% Similarity=0.188 Sum_probs=87.0
Q ss_pred ceeEeeeeccCCceEEEEEEEcCCCCEEEEEEec----------cch----------------hhHHHHHHHHHHcCC--
Q 011138 138 SYMAERVVGTGSFGVVFQAKCLETGDSVAIKKVL----------QDK----------------RYKNRELQIMRLLNH-- 189 (492)
Q Consensus 138 ~y~~~~~lG~G~fg~Vy~~~~~~~g~~vAiK~~~----------~~~----------------~~~~~E~~il~~l~h-- 189 (492)
-|.++..||-|--+.||.+-+ ..|.+.++|.-. ... -...+|...|+.|..
T Consensus 93 v~svGnqIGVGKESDIY~v~d-~~G~~~~lK~HRLGRtSFR~Vk~kRDY~r~r~~~sWlyLSRlaa~kEfafmkaL~e~g 171 (465)
T KOG2268|consen 93 VESVGNQIGVGKESDIYVVAD-EEGNPLILKLHRLGRTSFRNVKNKRDYLRKRKSGSWLYLSRLAATKEFAFMKALYERG 171 (465)
T ss_pred hhhhccccccccccceEEEec-CCCCchhHHHHhhhhhhHHHhhhhhhhHhcCCccchhhhHHHHHHHHHHHHHHHHHcC
Confidence 367788899999999999975 568888988421 011 112368999998853
Q ss_pred CCccccceeeeeccCCCceEEEEEeeechhhHHHHhhhhhhcCCCcCHHHHHHHHHHHHHHHHHHHhhCCcccCCCCCCc
Q 011138 190 PNVVSLKHCFFSTTEKDELYLNLVLEYISETVYRVSKHYTRMNQHVPILYVQLYTYQICRALNYLHHVVGVCHRDIKPQN 269 (492)
Q Consensus 190 ~nIv~l~~~~~~~~~~~~~~~~lV~E~~~~~l~~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~yLH~~~givHrDlKp~N 269 (492)
=-+.+.+++ ...|+|||++.|--+.-..+ .. .+..+...++.-+.-|-. +|+||+|..--|
T Consensus 172 fpVPkpiD~---------~RH~Vvmelv~g~Pl~~v~~------v~---d~~~ly~~lm~~Iv~la~-~GlIHgDFNEFN 232 (465)
T KOG2268|consen 172 FPVPKPIDH---------NRHCVVMELVDGYPLRQVRH------VE---DPPTLYDDLMGLIVRLAN-HGLIHGDFNEFN 232 (465)
T ss_pred CCCCCcccc---------cceeeHHHhhcccceeeeee------cC---ChHHHHHHHHHHHHHHHH-cCceecccchhe
Confidence 224444443 34678999998743321111 11 122334455555666776 899999999999
Q ss_pred eEEcCCCCcEEEeeecCc
Q 011138 270 LLVNPHTHQLKICDFGSA 287 (492)
Q Consensus 270 ILl~~~~~~vkL~DFG~a 287 (492)
|+|+.++ .++++||--.
T Consensus 233 imv~dd~-~i~vIDFPQm 249 (465)
T KOG2268|consen 233 IMVKDDD-KIVVIDFPQM 249 (465)
T ss_pred eEEecCC-CEEEeechHh
Confidence 9999777 6999999754
No 471
>KOG1826 consensus Ras GTPase activating protein RasGAP/neurofibromin [Defense mechanisms]
Probab=97.54 E-value=3.5e-05 Score=87.05 Aligned_cols=216 Identities=14% Similarity=0.003 Sum_probs=137.9
Q ss_pred HHHHHHHHcCCCCccccceeeeeccCCCceEEEEEeeechhh-HHHHhhhhhhcCCCcCHHHHHHHHHHHHHHHHHHHhh
Q 011138 179 RELQIMRLLNHPNVVSLKHCFFSTTEKDELYLNLVLEYISET-VYRVSKHYTRMNQHVPILYVQLYTYQICRALNYLHHV 257 (492)
Q Consensus 179 ~E~~il~~l~h~nIv~l~~~~~~~~~~~~~~~~lV~E~~~~~-l~~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~yLH~~ 257 (492)
.|...++...|++++..+.-... ......+.+++|+.++ +...+..-......+....+.....+.+.+..-+|+.
T Consensus 1278 ~e~de~~~~~h~~~~~~p~rI~p---s~s~ee~~r~~~~~~g~~f~iIikg~ee~~~ld~~~v~~~~kvsvl~~~~~ls~ 1354 (2724)
T KOG1826|consen 1278 SERDELREAKHYLTEVDPLRIPP---SESTEEYIRSLYVEFGKLFSIIIKGLEESPDLDRSPVHLRHKVSVLNRNVILSL 1354 (2724)
T ss_pred hhhhhhhhhhceeeecccccCCC---CCChHHHHHHHHHHHhHHHHHHHhccccCCcchhchHHHHHHHHHhccchhhhc
Confidence 35555666789998876543322 2233356899999854 4454443333333344444444444446667776642
Q ss_pred CC----cccCCCCCCceEEcCCCCcEEEeeecCccccCC-CCCCccceeccCccCchhhcCCCCCCcchhhHHHHHHHHH
Q 011138 258 VG----VCHRDIKPQNLLVNPHTHQLKICDFGSAKMLVP-GEPNISYICSRYYRAPELIFGATEYTTAIDMWSIGCVLAE 332 (492)
Q Consensus 258 ~g----ivHrDlKp~NILl~~~~~~vkL~DFG~a~~~~~-~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DvwSlGvil~e 332 (492)
.+ .+|++||+-|.+|..+. ++|++++|+.++..+ ........+++.|++|++.. .-.++.++|+|..|+.+|+
T Consensus 1355 tnlg~T~v~~~Lkf~lpmIVtny-~v~~gk~gLdKIknp~~sf~Gl~l~sp~~v~qli~N-~ik~t~rsdilr~s~~ly~ 1432 (2724)
T KOG1826|consen 1355 TNLGNTNVSKSLKFTLPMIVTNY-NVKLGKGGLDKIKNPVLSFFGLELCSPIYVLQLIKN-EIKFTKRSDILRRSLSLYL 1432 (2724)
T ss_pred ccCCccchhhhhhhhccceecCC-cccccccccccccCchHhhhhhhhCCHHHHHHHHHH-HHhhhhHHHHHHHHHHHHH
Confidence 22 68999999999999777 799999999994332 23344567899999999874 4447888999999999999
Q ss_pred HHhCCCCCCCCChHHHHHHHHHHhCCCCHHHHhhcCCCCcccCCCcccCCCcccccCCCCChhHhhhhccccccCCCCcC
Q 011138 333 LLLGQPLFPGESGVDQLVEIIKILGTPTREEIKCMNPNYTEFKFPQIKAHPWHKIFHKRMPPEALDLVSRLLQYSPSLRC 412 (492)
Q Consensus 333 ll~G~~pf~~~~~~~~~~~i~~~~g~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~Li~~~L~~dP~~R~ 412 (492)
..-|.++|- ..+..+.+ +.-.+-.....+ ...|.++-.+...+|-+.-..||
T Consensus 1433 rs~~n~~fi-----~flq~~Lk-----------giidn~tf~sIe------------~l~pgdaNve~~~~Ll~K~~~rp 1484 (2724)
T KOG1826|consen 1433 RSDGNAYFI-----FFLQPALK-----------GIIDNHTFFSIE------------KLKPGDANVEALHRLLWKYMERP 1484 (2724)
T ss_pred HhcccHHHH-----HHHHHHHc-----------Cccccccccccc------------ccCCCcccHHHHHHHHHHhhhcc
Confidence 999987772 22222222 111111222222 12355566666666767778899
Q ss_pred CHHHhhCCCCCCCCC
Q 011138 413 TALEACAHPFFDDLR 427 (492)
Q Consensus 413 t~~e~l~Hp~f~~~~ 427 (492)
.-...+.-+.|...+
T Consensus 1485 ~q~isls~d~~a~~~ 1499 (2724)
T KOG1826|consen 1485 GQYISLSRDHFAVGL 1499 (2724)
T ss_pred hhhhhcccccccccc
Confidence 999998888887544
No 472
>cd05157 ETNK_euk Ethanolamine kinase (ETNK) in eukaryotes. ETNK is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). ETNK catalyzes the transfer of the gamma-phosphoryl group from CTP to ethanolamine (Etn), the first step in the CDP-Etn pathway for the formation of the major phospholipid, phosphatidylethanolamine (PtdEtn). Unlike ChoK, ETNK shows specific activity for its substrate, and displays negligible activity towards N-methylated derivatives of Etn. The Drosophila ETNK is implicated in development and neuronal function. Mammals contain two ETNK proteins, ETNK1 and ETNK2. ETNK1 selectively increases Etn uptake and phosphorylation, as well as PtdEtn synthesis. ETNK2 is found primarily in the liver and reproductive tissues. It plays a critical role in regulating placental hemostasis to support late embryo
Probab=97.52 E-value=0.0013 Score=62.22 Aligned_cols=68 Identities=22% Similarity=0.327 Sum_probs=43.7
Q ss_pred eeeccCCceEEEEEEEcC-CCCEEEEEEeccch---hhHHHHHHHHHHcCCCC-ccccceeeeeccCCCceEEEEEeeec
Q 011138 143 RVVGTGSFGVVFQAKCLE-TGDSVAIKKVLQDK---RYKNRELQIMRLLNHPN-VVSLKHCFFSTTEKDELYLNLVLEYI 217 (492)
Q Consensus 143 ~~lG~G~fg~Vy~~~~~~-~g~~vAiK~~~~~~---~~~~~E~~il~~l~h~n-Iv~l~~~~~~~~~~~~~~~~lV~E~~ 217 (492)
+.|..|-...||++.... .++.|.+|+..... ...++|..+++.+...+ .++++..+ .+ .+||||+
T Consensus 4 ~~l~gG~tN~~~~v~~~~~~~~~~vlR~~~~~~~~~~d~~~E~~~~~~l~~~gl~P~v~~~~-----~~----~~l~e~i 74 (235)
T cd05157 4 KRFTGGITNKLVKVSNKEDNQDAVLVRVYGNKTELIIDRERELRIHKLLSKHGLAPKLYATF-----QN----GLIYEFI 74 (235)
T ss_pred EEcCCcccceEEEEEcCCCCCCeEEEEEccCCccceecHHHHHHHHHHHHhCCCCCeEEEEe-----CC----cEEEEee
Confidence 457788888999987433 35788899764322 22347999999986433 34443322 11 2799998
Q ss_pred hh
Q 011138 218 SE 219 (492)
Q Consensus 218 ~~ 219 (492)
+|
T Consensus 75 ~G 76 (235)
T cd05157 75 PG 76 (235)
T ss_pred CC
Confidence 76
No 473
>TIGR02721 ycfN_thiK thiamine kinase. Members of this family are the ycfN gene product of Escherichia coli, now identified as the salvage enzyme thiamine kinase (thiK), and additional proteobacterial homologs taken to be orthologs with equivalent function.
Probab=97.49 E-value=0.00045 Score=66.46 Aligned_cols=132 Identities=19% Similarity=0.241 Sum_probs=73.8
Q ss_pred eccCCceEEEEEEEcCCCCEEEEEEeccchh----hHHHHHHHHHHcCCCCc-cccceeeeeccCCCceEEEEEeeechh
Q 011138 145 VGTGSFGVVFQAKCLETGDSVAIKKVLQDKR----YKNRELQIMRLLNHPNV-VSLKHCFFSTTEKDELYLNLVLEYISE 219 (492)
Q Consensus 145 lG~G~fg~Vy~~~~~~~g~~vAiK~~~~~~~----~~~~E~~il~~l~h~nI-v~l~~~~~~~~~~~~~~~~lV~E~~~~ 219 (492)
+..|-.+.+|+.. .+|+.+.+|....... ..++|..+++.+....+ .+++... . -++||||++|
T Consensus 4 ~~~G~tn~~y~~~--~~~~~~vlR~~~~~~~~~~~~r~~E~~~l~~l~~~g~~P~~i~~~-----~----~~~v~e~i~G 72 (256)
T TIGR02721 4 LSGGLTNRSWRIE--HPGISFVWRPQSPVCKALGVDRQREYQILQALSALGLAPKPILVN-----E----HWLLVEWLEG 72 (256)
T ss_pred CCCcCcCCeEEEE--eCCccEEEeeCCcccccccCcHHHHHHHHHHHHhcCCCCceEEEe-----C----CEEEEEeccC
Confidence 4567778889876 3567788887543321 34679999999874433 3333322 1 1479999987
Q ss_pred hHHHH------------h---hhhhhc---CCCcCH-HHHHHHHHHH---------HHHHHHHHh-------hCCcccCC
Q 011138 220 TVYRV------------S---KHYTRM---NQHVPI-LYVQLYTYQI---------CRALNYLHH-------VVGVCHRD 264 (492)
Q Consensus 220 ~l~~~------------~---~~~~~~---~~~~~~-~~~~~i~~qi---------~~aL~yLH~-------~~givHrD 264 (492)
..... . ...... ...+.. ..+..+..++ ...+..+-. ...++|+|
T Consensus 73 ~~~~~~~~~~~~~~~~la~~l~~lH~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~H~D 152 (256)
T TIGR02721 73 EVITLDQFVALDLLLELAALLHQLHSQPRFGYPLSLKARIAHYWLQIDPARRTPEWLRLYKQFRSAPEPAPLPLAPLHMD 152 (256)
T ss_pred cccccccccCchhHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHHhcccccCChHHHHHHHHHHhccCCCCCCCeeecCC
Confidence 43221 1 000000 111111 1112222122 111222211 02589999
Q ss_pred CCCCceEEcCCCCcEEEeeecCccc
Q 011138 265 IKPQNLLVNPHTHQLKICDFGSAKM 289 (492)
Q Consensus 265 lKp~NILl~~~~~~vkL~DFG~a~~ 289 (492)
+.|.||+++.++ +.|+||..|..
T Consensus 153 l~~~Nil~~~~~--~~lIDwE~a~~ 175 (256)
T TIGR02721 153 VHAYNLVVTPQG--LKLIDWEYASD 175 (256)
T ss_pred CCcCcEEEeCCC--CEEEeccccCc
Confidence 999999999765 78999998864
No 474
>PRK10593 hypothetical protein; Provisional
Probab=97.42 E-value=0.002 Score=63.42 Aligned_cols=75 Identities=8% Similarity=0.030 Sum_probs=50.1
Q ss_pred eeeeccCCceEEEEEEEcCCCCEEEEEEecc--chhhHHHHHHHHHHcCC---CCccccceeeeeccCCCceEEEEEeee
Q 011138 142 ERVVGTGSFGVVFQAKCLETGDSVAIKKVLQ--DKRYKNRELQIMRLLNH---PNVVSLKHCFFSTTEKDELYLNLVLEY 216 (492)
Q Consensus 142 ~~~lG~G~fg~Vy~~~~~~~g~~vAiK~~~~--~~~~~~~E~~il~~l~h---~nIv~l~~~~~~~~~~~~~~~~lV~E~ 216 (492)
.+.||.|..+.||+... .+| .+.+|.... ......+|...|+.|.. -.++++++++.... ....-+||||+
T Consensus 19 ~~~i~~G~~~~vy~~~~-~~~-~~~~k~~~~~~~~~~~~~Ea~~L~~L~~~~~vpVP~V~~~~~~~~--~~g~~~LVmE~ 94 (297)
T PRK10593 19 VECISEQPYAALWALYD-SQG-NPMPLMARSFSTPGVAQQEAWKLSMLARSGTVRMPTVYGVMTHEQ--SPGPDVLLLER 94 (297)
T ss_pred eeecCCccceeEEEEEc-CCC-CEEEEEecccccchHHHHHHHHHHHHccCCCCCcCcEEEEeccCC--cCCCeEEEEec
Confidence 35699999999999863 223 466676543 23577889999999863 35677776552211 12236799999
Q ss_pred chhh
Q 011138 217 ISET 220 (492)
Q Consensus 217 ~~~~ 220 (492)
++|.
T Consensus 95 i~G~ 98 (297)
T PRK10593 95 LRGV 98 (297)
T ss_pred cCCE
Confidence 8863
No 475
>KOG2270 consensus Serine/threonine protein kinase involved in cell cycle control [Signal transduction mechanisms; Cell cycle control, cell division, chromosome partitioning]
Probab=97.40 E-value=0.0013 Score=64.84 Aligned_cols=136 Identities=19% Similarity=0.261 Sum_probs=91.4
Q ss_pred EeeeeccCCceEEEEEEEcCCCCEEEEEEeccc------h------------------------hhHHHHHHHHHHcCCC
Q 011138 141 AERVVGTGSFGVVFQAKCLETGDSVAIKKVLQD------K------------------------RYKNRELQIMRLLNHP 190 (492)
Q Consensus 141 ~~~~lG~G~fg~Vy~~~~~~~g~~vAiK~~~~~------~------------------------~~~~~E~~il~~l~h~ 190 (492)
+..+|..|--+.||.|. ..+|..+|||+++.. . -..++|++-|++|+.-
T Consensus 148 inGCiSTGKEANVYHat-~~dG~~~AIKIYKTSILvFKDRdRYV~GEfRFRhgyck~NPRKMVk~WAEKE~RNLkRl~~a 226 (520)
T KOG2270|consen 148 INGCISTGKEANVYHAT-EEDGSEFAIKIYKTSILVFKDRDRYVSGEFRFRHGYCKHNPRKMVKTWAEKEMRNLKRLNNA 226 (520)
T ss_pred cccccccCccceeEeee-cCCCceEEEEEEeeeEEEEechhhhccceeeeecccccCCcHHHHHHHHHHHHHHHHHHHhc
Confidence 44568889999999997 568999999987321 1 1123588888888754
Q ss_pred CccccceeeeeccCCCceEEEEEeeechhhHHHHhhhhhhcCCCcCHHHHHHHHHHHHHHHHHHHhhCCcccCCCCCCce
Q 011138 191 NVVSLKHCFFSTTEKDELYLNLVLEYISETVYRVSKHYTRMNQHVPILYVQLYTYQICRALNYLHHVVGVCHRDIKPQNL 270 (492)
Q Consensus 191 nIv~l~~~~~~~~~~~~~~~~lV~E~~~~~l~~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~yLH~~~givHrDlKp~NI 270 (492)
.|.-.--+.. . .-.|||+|++..-+- .-......++...+..+-.|++.-+.-|-+..+.||.||.--|+
T Consensus 227 GIP~PePIlL------k-~hVLVM~FlGrdgw~---aPkLKd~~ls~~ka~~~Y~~~v~~MR~lY~~c~LVHADLSEfN~ 296 (520)
T KOG2270|consen 227 GIPCPEPILL------K-NHVLVMEFLGRDGWA---APKLKDASLSTSKARELYQQCVRIMRRLYQKCRLVHADLSEFNL 296 (520)
T ss_pred CCCCCCceee------e-cceEeeeeccCCCCc---CcccccccCChHHHHHHHHHHHHHHHHHHHHhceeccchhhhhh
Confidence 4432211111 0 134899999853221 11112344566667777778888887775558999999999999
Q ss_pred EEcCCCCcEEEeeecCccc
Q 011138 271 LVNPHTHQLKICDFGSAKM 289 (492)
Q Consensus 271 Ll~~~~~~vkL~DFG~a~~ 289 (492)
|+. +| .+.|+|-+-+..
T Consensus 297 Lyh-dG-~lyiIDVSQSVE 313 (520)
T KOG2270|consen 297 LYH-DG-KLYIIDVSQSVE 313 (520)
T ss_pred eEE-CC-EEEEEEcccccc
Confidence 998 44 699999987753
No 476
>PF12260 PIP49_C: Protein-kinase domain of FAM69; InterPro: IPR022049 Family with sequence similarity 69 has three members (A, B and C). Proteins in this uncharacterised family are described as transmembrane proteins.
Probab=97.36 E-value=0.00049 Score=62.86 Aligned_cols=102 Identities=22% Similarity=0.202 Sum_probs=75.1
Q ss_pred HHHHHHHHHcCC-CCccccceeeeeccCCCceEEEEEeeechhh-HHHHhhhhhhcCCCcCHHHHHHHHHHHHHHHHHHH
Q 011138 178 NRELQIMRLLNH-PNVVSLKHCFFSTTEKDELYLNLVLEYISET-VYRVSKHYTRMNQHVPILYVQLYTYQICRALNYLH 255 (492)
Q Consensus 178 ~~E~~il~~l~h-~nIv~l~~~~~~~~~~~~~~~~lV~E~~~~~-l~~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~yLH 255 (492)
..|.-+|+.+.+ +++++++|++ . -++|.||.+.+ ++... .....-...++.....|+.+++..+.+|+
T Consensus 7 ~~E~lll~~l~~~~~~pk~lG~C-----G----~~~v~E~~~~~~~~~~~-~~l~~~~~~~w~~R~~iA~~lL~~l~~l~ 76 (188)
T PF12260_consen 7 NNEPLLLQLLQGSEPFPKLLGSC-----G----RFYVVEYVGAGSLYGIY-RPLSQFLQSPWEQRAKIALQLLELLEELD 76 (188)
T ss_pred ccHHHHHHHcCCCCCCCCeeeEC-----C----CEEEEEeecCccccccc-cccccccccCHHHHHHHHHHHHHHHHHHh
Confidence 358889999986 6999999987 2 24689999853 32110 00011134678889999999999999998
Q ss_pred hh--CCcccCCCCCCceEEcCCCCcEEEeeecCcccc
Q 011138 256 HV--VGVCHRDIKPQNLLVNPHTHQLKICDFGSAKML 290 (492)
Q Consensus 256 ~~--~givHrDlKp~NILl~~~~~~vkL~DFG~a~~~ 290 (492)
+. ..+.-.|++|+|+-++.++ .+|++|...+...
T Consensus 77 ~~~~~~~~lcDv~~~nfgv~~~~-~lk~iDld~v~~~ 112 (188)
T PF12260_consen 77 HGPLGFFYLCDVSPDNFGVNDDG-RLKLIDLDDVFVE 112 (188)
T ss_pred cCCCCcEEEeecchHHeEEeCCC-cEEEEechhcchh
Confidence 41 1366799999999999777 7999999977543
No 477
>cd05153 HomoserineK_II Homoserine Kinase, type II. Homoserine kinase is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). This subfamily is composed of unusual homoserine kinases, from a subset of bacteria, which have a PK fold. These proteins do not bear any similarity to the GHMP family homoserine kinases present in most bacteria and eukaryotes. Homoserine kinase catalyzes the transfer of the gamma-phosphoryl group from ATP to L-homoserine producing L-homoserine phosphate, an intermediate in the production of the amino acids threonine, methionine, and isoleucine.
Probab=97.30 E-value=0.00093 Score=65.65 Aligned_cols=143 Identities=11% Similarity=0.033 Sum_probs=77.2
Q ss_pred eeeccCCceEEEEEEEcCCCCEEEEEEecc-chhhHHHHHHHHHHcCCCC--ccccceeeeecc-CCCceEEEEEeeech
Q 011138 143 RVVGTGSFGVVFQAKCLETGDSVAIKKVLQ-DKRYKNRELQIMRLLNHPN--VVSLKHCFFSTT-EKDELYLNLVLEYIS 218 (492)
Q Consensus 143 ~~lG~G~fg~Vy~~~~~~~g~~vAiK~~~~-~~~~~~~E~~il~~l~h~n--Iv~l~~~~~~~~-~~~~~~~~lV~E~~~ 218 (492)
+.|..|.-..+|+... ++..+++|+... .......|+.+++.|.+.+ +++++...-... .......++|+++++
T Consensus 20 ~~i~~G~~n~~y~v~~--~~~~~vLr~~~~~~~~~~~~e~~~l~~L~~~g~~vp~~i~~~~g~~~~~~~~~~~~l~~~i~ 97 (296)
T cd05153 20 EGISAGIENTNYFVTT--DSGRYVLTLFEKVSAEELPFFLALLDHLAERGLPVPRPIADRDGEYLSELAGKPAALVEFLA 97 (296)
T ss_pred ecccCccccceEEEEe--CCCcEEEEEcCCCChHhccHHHHHHHHHHHCCCCCCccccCCCCcEeeeeCCceEEEEEeCC
Confidence 4577787788998764 345688898763 3344567898888885433 444433210000 011123578999997
Q ss_pred hhHHH---------H---hhhhhhcCCCc--------CHHHHH------------HHHHHHHHHHHHHHh------hCCc
Q 011138 219 ETVYR---------V---SKHYTRMNQHV--------PILYVQ------------LYTYQICRALNYLHH------VVGV 260 (492)
Q Consensus 219 ~~l~~---------~---~~~~~~~~~~~--------~~~~~~------------~i~~qi~~aL~yLH~------~~gi 260 (492)
|.... + +.........+ ...... .....+..++.++.. ..++
T Consensus 98 G~~~~~~~~~~~~~lg~~La~lH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~l~~~~~~~~~~~l 177 (296)
T cd05153 98 GEHLTRPTAAHCRQIGEALARLHLAAQSFPGERNNLRGLAWIRELGKDLLPLLSAEDRALLADELARQDAFDPSDLPRGV 177 (296)
T ss_pred CCCCCCCCHHHHHHHHHHHHHHHHHhccCCccCCCcCCcHHHHHHHHHhccccCHHHHHHHHHHHHHHHhhhhhcCCCcC
Confidence 63211 0 00000000000 000000 011112233444432 1479
Q ss_pred ccCCCCCCceEEcCCCCcEEEeeecCcc
Q 011138 261 CHRDIKPQNLLVNPHTHQLKICDFGSAK 288 (492)
Q Consensus 261 vHrDlKp~NILl~~~~~~vkL~DFG~a~ 288 (492)
||+|+.|.|||++.++ .+.|+||+.+.
T Consensus 178 ~HgD~~~~Nil~~~~~-~~~iIDfe~a~ 204 (296)
T cd05153 178 IHADLFRDNVLFDGDE-LSGVIDFYFAC 204 (296)
T ss_pred CccCcCcccEEEeCCc-eEEEeehhhhc
Confidence 9999999999999765 56899999875
No 478
>TIGR00938 thrB_alt homoserine kinase, Neisseria type. Homoserine kinase is required in the biosynthesis of threonine from aspartate.The member of this family from Pseudomonas aeruginosa was shown by direct assay and complementation to act specifically as a homoserine kinase.
Probab=97.23 E-value=0.0036 Score=61.92 Aligned_cols=144 Identities=15% Similarity=0.096 Sum_probs=77.3
Q ss_pred eeeeccCCceEEEEEEEcCCCCEEEEEEeccc--hhhHHHHHHHHHHcCCCC--ccccceeeeec-cCCCceEEEEEeee
Q 011138 142 ERVVGTGSFGVVFQAKCLETGDSVAIKKVLQD--KRYKNRELQIMRLLNHPN--VVSLKHCFFST-TEKDELYLNLVLEY 216 (492)
Q Consensus 142 ~~~lG~G~fg~Vy~~~~~~~g~~vAiK~~~~~--~~~~~~E~~il~~l~h~n--Iv~l~~~~~~~-~~~~~~~~~lV~E~ 216 (492)
.+.++.|.-..+|++.. .+| .+.+|+.... ......|.+++..|.... +++++...... ........++|++|
T Consensus 27 i~~~~~G~~n~~y~v~t-~~~-~~vLK~~~~~~~~~~i~~e~~~l~~L~~~g~pvp~~i~t~~g~~~~~~~g~~~~l~e~ 104 (307)
T TIGR00938 27 LKGIAEGVENSNYLLTT-DVG-RYILTLYEKRVKAEELPFFLALTTHLAARGLPVPKPVKSRDGRQLSTLAGKPACLVEF 104 (307)
T ss_pred ccccCCccccceEEEEe-CCC-cEEEEEecCCCCHHHHHHHHHHHHHHHHCCCCCCccccCCCCCeehhcCCeEEEEEEe
Confidence 34577777788998863 334 5778876543 344557888888885322 34443311000 00112346789999
Q ss_pred chhhHH---------HH---hhhhhhcCCC----------cCH-HH--HH----------HHHHHHHHHHHHHHh-----
Q 011138 217 ISETVY---------RV---SKHYTRMNQH----------VPI-LY--VQ----------LYTYQICRALNYLHH----- 256 (492)
Q Consensus 217 ~~~~l~---------~~---~~~~~~~~~~----------~~~-~~--~~----------~i~~qi~~aL~yLH~----- 256 (492)
++|... .. +......... .+. .. .. .....+...++++..
T Consensus 105 i~G~~~~~~~~~~~~~~G~~LA~lH~~~~~~~~~~~~~~~~~~w~~~~~~~~~~~~~l~~~~~~~l~~~~~~l~~~~~~~ 184 (307)
T TIGR00938 105 LQGLSVGRPTAMHCRPVGEVLAWMHLAGAHFPENRKNSLRLEAWHILAEKCFEAAPQLEAHMGAELDKELDYLDKFWPRD 184 (307)
T ss_pred CCCCCCCCCCHHHHHHHHHHHHHHHhhhccCCCCCCCCCChHHHHHHHHhhhhcccccCHHHHHHHHHHHHHHHhhhhhc
Confidence 876211 00 0000000000 000 00 00 001122334555531
Q ss_pred -hCCcccCCCCCCceEEcCCCCcEEEeeecCcc
Q 011138 257 -VVGVCHRDIKPQNLLVNPHTHQLKICDFGSAK 288 (492)
Q Consensus 257 -~~givHrDlKp~NILl~~~~~~vkL~DFG~a~ 288 (492)
..++||+|+.+.||+++.++ .+.|+||+.+.
T Consensus 185 ~~~~l~HgD~~~~Nvl~~~~~-~~~vIDfd~~~ 216 (307)
T TIGR00938 185 LPRGVIHADLFPDNVLFDGDS-VKGVIDFYFAC 216 (307)
T ss_pred CCCccCCCCCCcCcEEEECCc-eEEEeeccccc
Confidence 26899999999999999776 56899999875
No 479
>PRK05231 homoserine kinase; Provisional
Probab=97.13 E-value=0.0072 Score=60.08 Aligned_cols=30 Identities=30% Similarity=0.283 Sum_probs=25.5
Q ss_pred CCcccCCCCCCceEEcCCCCcEEEeeecCcc
Q 011138 258 VGVCHRDIKPQNLLVNPHTHQLKICDFGSAK 288 (492)
Q Consensus 258 ~givHrDlKp~NILl~~~~~~vkL~DFG~a~ 288 (492)
.|+||+|+.|.|||++.+. ..-|+||+.+.
T Consensus 187 ~~liHgD~~~~Nil~~~~~-~~~iIDf~~~~ 216 (319)
T PRK05231 187 RGVIHADLFRDNVLFEGDR-LSGFIDFYFAC 216 (319)
T ss_pred cccCCCCCCCCcEEEECCc-eEEEEeccccc
Confidence 4899999999999998554 45799999875
No 480
>KOG1093 consensus Predicted protein kinase (contains TBC and RHOD domains) [General function prediction only]
Probab=97.03 E-value=0.00084 Score=68.71 Aligned_cols=171 Identities=20% Similarity=0.248 Sum_probs=108.4
Q ss_pred HHHHHHHHcCCCCccccceeeeeccCCCceEEEEEeeechhhHHHHhhhhhhcCCCcCHHHHHHHHHHHHHHHHHHHhhC
Q 011138 179 RELQIMRLLNHPNVVSLKHCFFSTTEKDELYLNLVLEYISETVYRVSKHYTRMNQHVPILYVQLYTYQICRALNYLHHVV 258 (492)
Q Consensus 179 ~E~~il~~l~h~nIv~l~~~~~~~~~~~~~~~~lV~E~~~~~l~~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~yLH~~~ 258 (492)
-...+++.+.|+|..+++++--... ....+|||++..++.+...... ... .+++ | +
T Consensus 31 gr~~~lktl~~~~l~~yl~~~r~~~----~r~IVV~e~~~~Sled~~~~~~--l~~----------~s~~-~-------~ 86 (725)
T KOG1093|consen 31 GRFQYLKSLQHDNLCQYLDFSRGKH----ERVIVVMEHYTMSLEDILKTGN--LKD----------ESLL-A-------H 86 (725)
T ss_pred hhhHHHHhhcCccceeeEeeecCcc----ceEEEEehhhccchHHHHHhcc--cch----------hhhc-c-------c
Confidence 3577889999999999888652221 2377999999988776544311 100 0111 1 2
Q ss_pred CcccCCCCCCceEEcCCCCcEEEeeecCccccCCCCCCccceeccCccCchhhcCCCCCCcchhhHHHHHHHHHHHhCCC
Q 011138 259 GVCHRDIKPQNLLVNPHTHQLKICDFGSAKMLVPGEPNISYICSRYYRAPELIFGATEYTTAIDMWSIGCVLAELLLGQP 338 (492)
Q Consensus 259 givHrDlKp~NILl~~~~~~vkL~DFG~a~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DvwSlGvil~ell~G~~ 338 (492)
|+.|- | .++++| -++.. | |-. ..+++|||++|.++.++..|..
T Consensus 87 ~~~~~-----~--------~~~~td-~~~t~---------------~--~~~------~~pKsdVwsl~~i~~el~L~~~ 129 (725)
T KOG1093|consen 87 GVLHL-----N--------IIYITD-HFLTK---------------Y--PSP------IGPKSDVWSLGFIILELYLGIS 129 (725)
T ss_pred cccee-----h--------hhhccc-ccccc---------------C--CCC------CCcchhhhhHHHHHHHHHHhhH
Confidence 33331 1 244444 11110 0 111 1249999999999999999998
Q ss_pred CCCCCChHHHHHHHHHHhCCCCHHHHhhcCCCCcccCCCcccCCCcccccCCCCChhHhhhhccccccCCCCcCCHHHhh
Q 011138 339 LFPGESGVDQLVEIIKILGTPTREEIKCMNPNYTEFKFPQIKAHPWHKIFHKRMPPEALDLVSRLLQYSPSLRCTALEAC 418 (492)
Q Consensus 339 pf~~~~~~~~~~~i~~~~g~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~Li~~~L~~dP~~R~t~~e~l 418 (492)
.|......+++..+.+..-.+..-..-.+. ..+.-.++....++..+|+-..|..||...++.
T Consensus 130 l~~~~~~s~~l~~i~k~~~~d~~~~~~a~e-----------------~~~~~~~d~~~~~~~~~c~~~~~~ir~l~~~~~ 192 (725)
T KOG1093|consen 130 LEAELTESEYLEILLKYYTDDQELLSTAME-----------------HLIQLLADKKRLPLLKKCLWLEPIIRPLPMELS 192 (725)
T ss_pred HHHHHHHHHHHHHHHHhccCchhHHHHHHH-----------------HHHHHhhhHhHHHHhccCCccccccccchhHHh
Confidence 888777777777666654333322111100 011123567788999999999999999999999
Q ss_pred CCCCCCCCC
Q 011138 419 AHPFFDDLR 427 (492)
Q Consensus 419 ~Hp~f~~~~ 427 (492)
.|+-|.++.
T Consensus 193 k~~i~~ev~ 201 (725)
T KOG1093|consen 193 KRCSFTEVY 201 (725)
T ss_pred cCccHHHHH
Confidence 999998763
No 481
>TIGR01767 MTRK 5-methylthioribose kinase. This enzyme is involved in the methionine salvage pathway in certain bacteria.
Probab=96.93 E-value=0.0099 Score=59.42 Aligned_cols=69 Identities=23% Similarity=0.221 Sum_probs=43.5
Q ss_pred eeccCCceEEEEEEEcCCCCEEEEEEeccc-----------hhhHHHHHHHHHHcC--CC-CccccceeeeeccCCCceE
Q 011138 144 VVGTGSFGVVFQAKCLETGDSVAIKKVLQD-----------KRYKNRELQIMRLLN--HP-NVVSLKHCFFSTTEKDELY 209 (492)
Q Consensus 144 ~lG~G~fg~Vy~~~~~~~g~~vAiK~~~~~-----------~~~~~~E~~il~~l~--h~-nIv~l~~~~~~~~~~~~~~ 209 (492)
.||.|....||++.+...++.|.||.-... .....-|...|+... -| .++++|++ |...
T Consensus 2 EigdGnlN~VfrV~~~~g~~svIVKQAlp~vRv~g~~wpl~~~R~~~E~~~L~~~~~~~P~~vP~vy~~-------D~e~ 74 (370)
T TIGR01767 2 EVGDGNLNLVFHVYDQEGDRAAIVKQALPYVRVVGESWPLTLDRARIESSALIRQGEHVPHLVPRIFHF-------DTEM 74 (370)
T ss_pred cCCCCceEEEEEEEcCCCCeeEEEEEcCHHHhhcCCCCCCCccHHHHHHHHHHHhhccCccccCeEEEE-------cccc
Confidence 579999999999997543468999964211 112235788887664 23 45565543 2222
Q ss_pred EEEEeeechh
Q 011138 210 LNLVLEYISE 219 (492)
Q Consensus 210 ~~lV~E~~~~ 219 (492)
..+|||+++.
T Consensus 75 ~~~vMEdL~~ 84 (370)
T TIGR01767 75 AVTVMEDLSH 84 (370)
T ss_pred ceehHhhCcc
Confidence 4489999853
No 482
>PRK12396 5-methylribose kinase; Reviewed
Probab=96.74 E-value=0.012 Score=59.58 Aligned_cols=71 Identities=21% Similarity=0.239 Sum_probs=45.7
Q ss_pred eeeeccCCceEEEEEEEcCCCCEEEEEEecc----------chhhHHHHHHHHHHcC--CC-CccccceeeeeccCCCce
Q 011138 142 ERVVGTGSFGVVFQAKCLETGDSVAIKKVLQ----------DKRYKNRELQIMRLLN--HP-NVVSLKHCFFSTTEKDEL 208 (492)
Q Consensus 142 ~~~lG~G~fg~Vy~~~~~~~g~~vAiK~~~~----------~~~~~~~E~~il~~l~--h~-nIv~l~~~~~~~~~~~~~ 208 (492)
.+.||.|.-..||++.+...++.|.||.-.. ......-|.++|+.+. .| .++++|.+ |..
T Consensus 34 ~~eigdGnlN~VfrV~~~~~~~svIVKQAlp~vRv~~swpL~~~R~~~E~~aL~~~~~~~P~~VP~vy~~-------D~e 106 (409)
T PRK12396 34 CKEIGDGNLNYVFRVWDEQKNISVIVKQAGDTARISDEFKLSTNRIRIESDVLQLEEELAPGLVPKVYLF-------DSV 106 (409)
T ss_pred eeEcCCCceEEEEEEeeCCCCceEEEEeccHhhccCCCCCCChHHHHHHHHHHHHHHhhCCCcCCeEEEE-------CcH
Confidence 4578999999999999744467799996421 1122234888888764 33 46666543 222
Q ss_pred EEEEEeeechh
Q 011138 209 YLNLVLEYISE 219 (492)
Q Consensus 209 ~~~lV~E~~~~ 219 (492)
...+|||+++.
T Consensus 107 ~~~~vMEdL~~ 117 (409)
T PRK12396 107 MNCCVMEDLSD 117 (409)
T ss_pred HhhHHHHhCcc
Confidence 24589999853
No 483
>PLN02236 choline kinase
Probab=96.70 E-value=0.011 Score=59.38 Aligned_cols=31 Identities=29% Similarity=0.668 Sum_probs=26.3
Q ss_pred CcccCCCCCCceEEcCCCCcEEEeeecCccc
Q 011138 259 GVCHRDIKPQNLLVNPHTHQLKICDFGSAKM 289 (492)
Q Consensus 259 givHrDlKp~NILl~~~~~~vkL~DFG~a~~ 289 (492)
.++|+|+++.|||++.+...+.|+||..+..
T Consensus 201 ~~cH~Dl~~~Nil~~~~~~~~~lID~Eya~~ 231 (344)
T PLN02236 201 GFCHNDLQYGNIMIDEETRAITIIDYEYASY 231 (344)
T ss_pred eEEeCCCCcCcEEEeCCCCcEEEEeehhccc
Confidence 6899999999999986434799999998853
No 484
>COG3173 Predicted aminoglycoside phosphotransferase [General function prediction only]
Probab=96.67 E-value=0.019 Score=56.65 Aligned_cols=31 Identities=26% Similarity=0.474 Sum_probs=27.6
Q ss_pred CcccCCCCCCceEEcCCCCcEEEeeecCcccc
Q 011138 259 GVCHRDIKPQNLLVNPHTHQLKICDFGSAKML 290 (492)
Q Consensus 259 givHrDlKp~NILl~~~~~~vkL~DFG~a~~~ 290 (492)
.++|+|+.+.||+|+.++ .+-+.||+++..-
T Consensus 199 ~lvHGD~~~gNlii~~~~-~~gVlDwe~~~lG 229 (321)
T COG3173 199 VLVHGDYRPGNLIIDPGR-PTGVLDWELATLG 229 (321)
T ss_pred eeeeCCcccCCEEEeCCC-eeEEEeccccccC
Confidence 589999999999999888 5999999998754
No 485
>cd05156 ChoK_euk Choline Kinase (ChoK) in eukaryotes. The ChoK subfamily is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). It is composed of bacterial and eukaryotic choline kinases, as well as eukaryotic ethanolamine kinase. ChoK catalyzes the transfer of the gamma-phosphoryl group from ATP (or CTP) to its substrate, choline, producing phosphorylcholine (PCho), a precursor to the biosynthesis of two major membrane phospholipids, phosphatidylcholine (PC) and sphingomyelin (SM). Although choline is the preferred substrate, ChoK also shows substantial activity towards ethanolamine and its N-methylated derivatives. ChoK plays an important role in cell signaling pathways and the regulation of cell growth. Along with PCho, it is involved in malignant transformation through Ras oncogenes in various human cancer
Probab=96.67 E-value=0.02 Score=56.32 Aligned_cols=31 Identities=35% Similarity=0.570 Sum_probs=26.1
Q ss_pred CCcccCCCCCCceEEcCC---CCcEEEeeecCcc
Q 011138 258 VGVCHRDIKPQNLLVNPH---THQLKICDFGSAK 288 (492)
Q Consensus 258 ~givHrDlKp~NILl~~~---~~~vkL~DFG~a~ 288 (492)
.+++|+|+.+.|||++.+ .+.+.|+||..|.
T Consensus 179 ~~lcH~Dl~~~Nil~~~~~~~~~~i~lIDwEya~ 212 (302)
T cd05156 179 VVFCHNDLQEGNILLLNPSSETKKLVLIDFEYAS 212 (302)
T ss_pred ceEEecCCCcCeEEecCCCCCCCcEEEEeeCCCC
Confidence 368999999999999874 2279999999875
No 486
>PLN02421 phosphotransferase, alcohol group as acceptor/kinase
Probab=96.57 E-value=0.022 Score=56.98 Aligned_cols=30 Identities=27% Similarity=0.434 Sum_probs=25.6
Q ss_pred cccCCCCCCceEEcCCCCcEEEeeecCccc
Q 011138 260 VCHRDIKPQNLLVNPHTHQLKICDFGSAKM 289 (492)
Q Consensus 260 ivHrDlKp~NILl~~~~~~vkL~DFG~a~~ 289 (492)
++|.|+.+.|||++++++.++++||..|..
T Consensus 184 ~CHnDl~~~NiL~~~~~~~l~lID~EYag~ 213 (330)
T PLN02421 184 FAHNDLLSGNLMLNEDEGKLYFIDFEYGSY 213 (330)
T ss_pred EEECCCCcccEEEeCCCCcEEEEcccccCC
Confidence 799999999999975544799999998853
No 487
>TIGR02906 spore_CotS spore coat protein, CotS family. Members of this family include the spore coat proteins CotS and YtaA from Bacillus subtilis and, from other endospore-forming bacteria, homologs that are more closely related to these two than to the spore coat proteins YutH and YsxE. The CotS family is more broadly distributed than YutH or YsxE, but still is not universal among spore-formers.
Probab=96.56 E-value=0.034 Score=54.90 Aligned_cols=29 Identities=28% Similarity=0.602 Sum_probs=25.2
Q ss_pred CCcccCCCCCCceEEcCCCCcEEEeeecCcc
Q 011138 258 VGVCHRDIKPQNLLVNPHTHQLKICDFGSAK 288 (492)
Q Consensus 258 ~givHrDlKp~NILl~~~~~~vkL~DFG~a~ 288 (492)
.+++|+|+.+.||+++. + .+.|+||+.+.
T Consensus 187 ~~liHgD~~~~Nil~~~-~-~i~lIDfd~~~ 215 (313)
T TIGR02906 187 RGFCHQDYAYHNILLKD-N-EVYVIDFDYCT 215 (313)
T ss_pred CceEcCCCCcccEEEeC-C-cEEEEECcccc
Confidence 57999999999999986 4 58999999764
No 488
>cd05152 MPH2' Macrolide 2'-Phosphotransferase (MPH2'). MPH2' is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). MPH2' catalyzes the transfer of the gamma-phosphoryl group from ATP to the 2'-hydroxyl of macrolide antibiotics such as erythromycin, clarithromycin, and azithromycin, among others. Macrolides penetrate the bacterial cell and bind to ribosomes, where it interrupts protein elongation, leading ultimately to the demise of the bacterium. Phosphorylation of macrolides leads to their inactivation. Based on substrate specificity and amino acid sequence, MPH2' is divided into types I and II, encoded by mphA and mphB genes, respectively. MPH2'I inactivates 14-membered ring macrolides while MPH2'II inactivates both 14- and 16-membered ring macrolides. Enzymatic inactivation of macrolides has been reported
Probab=96.41 E-value=0.018 Score=55.97 Aligned_cols=31 Identities=23% Similarity=0.485 Sum_probs=25.6
Q ss_pred CcccCCCCCCceEEcCCCCcEEEeeecCccc
Q 011138 259 GVCHRDIKPQNLLVNPHTHQLKICDFGSAKM 289 (492)
Q Consensus 259 givHrDlKp~NILl~~~~~~vkL~DFG~a~~ 289 (492)
.++|+|++|.|||++.++...-|+||+.+..
T Consensus 186 ~lvHGD~~~~Nilv~~~~~~~gviDWe~a~i 216 (276)
T cd05152 186 VLVHGDLHPGHILIDEDARVTGLIDWTEAKV 216 (276)
T ss_pred eeEeCCCCCCcEEEeCCCCEEEEECcHhccc
Confidence 4899999999999996453457999998864
No 489
>PLN02756 S-methyl-5-thioribose kinase
Probab=96.16 E-value=0.069 Score=54.47 Aligned_cols=69 Identities=20% Similarity=0.249 Sum_probs=45.1
Q ss_pred eeeeccCCceEEEEEEEcCCCCEEEEEEec-----c------chhhHHHHHHHHHHcC---CCCccccceeeeeccCCCc
Q 011138 142 ERVVGTGSFGVVFQAKCLETGDSVAIKKVL-----Q------DKRYKNRELQIMRLLN---HPNVVSLKHCFFSTTEKDE 207 (492)
Q Consensus 142 ~~~lG~G~fg~Vy~~~~~~~g~~vAiK~~~-----~------~~~~~~~E~~il~~l~---h~nIv~l~~~~~~~~~~~~ 207 (492)
.+.||.|.-..||+..+ .+..|.||.-. . +......|...|+.+. ..++++++.+. .+.
T Consensus 37 ~~eiggGn~N~VyrV~~--~~~svVVKqa~p~~r~vga~wpl~~~R~~~Ea~aL~~~~~~~p~~VPkVy~~d-----ed~ 109 (418)
T PLN02756 37 IKEVGDGNLNFVYIVVS--SSGSFVIKQALPYIRCIGESWPMTKERAYFEATALREHGRLCPDHVPEVYHFD-----RTM 109 (418)
T ss_pred EEEcCCCceeeEEEEEc--CCccEEEEeCCccccCCCccccCCccHHHHHHHHHHHhhhcCCCCCCeEEEEC-----CCC
Confidence 45789999999999886 34568899653 1 1122234667776654 24677777654 222
Q ss_pred eEEEEEeeechh
Q 011138 208 LYLNLVLEYISE 219 (492)
Q Consensus 208 ~~~~lV~E~~~~ 219 (492)
-++|||++++
T Consensus 110 --~vlvME~L~~ 119 (418)
T PLN02756 110 --ALIGMRYLEP 119 (418)
T ss_pred --CEEEEeecCC
Confidence 4578999966
No 490
>TIGR02904 spore_ysxE spore coat protein YsxE. Members of this family are homologs of the Bacillus subtilis spore coat protein CotS. Members of this family, designated YsxE, are found only in the family Bacillaceae, from among the endospore-forming members of the Firmicutes branch of the Bacteria. As a rule, the ysxE gene is found immediately downstream of spoVID, a gene necessary for spore coat assembly. The protein has been shown to be part of the spore coat.
Probab=96.15 E-value=0.055 Score=53.55 Aligned_cols=31 Identities=13% Similarity=0.186 Sum_probs=27.1
Q ss_pred CCcccCCCCCCceEEcCCCCcEEEeeecCccc
Q 011138 258 VGVCHRDIKPQNLLVNPHTHQLKICDFGSAKM 289 (492)
Q Consensus 258 ~givHrDlKp~NILl~~~~~~vkL~DFG~a~~ 289 (492)
.++||+|+.+.|||++.++ .+.++||..+..
T Consensus 196 ~~lcHgD~~~~Nvl~~~~~-~~~iIDfd~~~~ 226 (309)
T TIGR02904 196 TVLVHGKLSLSHFLYDETR-GGYFINFEKASF 226 (309)
T ss_pred eeeeCCCCcHHhEEEcCCC-CEEEEEhhhccc
Confidence 3799999999999998776 689999998753
No 491
>COG5072 ALK1 Serine/threonine kinase of the haspin family [Cell division and chromosome partitioning]
Probab=95.80 E-value=0.031 Score=55.37 Aligned_cols=75 Identities=16% Similarity=0.274 Sum_probs=57.9
Q ss_pred CCceEEEEEeeechhhHHHHhhhhhhcCCCcCHHHHHHHHHHHHHHHHHHHhhCCcccCCCCCCceEEcCCCCcEEEeee
Q 011138 205 KDELYLNLVLEYISETVYRVSKHYTRMNQHVPILYVQLYTYQICRALNYLHHVVGVCHRDIKPQNLLVNPHTHQLKICDF 284 (492)
Q Consensus 205 ~~~~~~~lV~E~~~~~l~~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~yLH~~~givHrDlKp~NILl~~~~~~vkL~DF 284 (492)
....|+|++|++.++.+... ......++..++.+.+..+.-|...-..=|||+...||||+ +| +|-|+||
T Consensus 296 de~~y~yl~~kdhgt~is~i--------k~~~~~e~lsff~s~~sil~~lekkf~fehrnlt~~niLId-~G-nvtLIDf 365 (488)
T COG5072 296 DETLYLYLHFKDHGTPISII--------KADRSEEELSFFWSCISILDILEKKFPFEHRNLTLDNILID-EG-NVTLIDF 365 (488)
T ss_pred CCceEEEEEEecCCceeeee--------ecccHHHHHHHHHHHHHHHhhhhhcCCcccccccccceeee-cC-ceEEEEe
Confidence 45668999999987654321 22345667778888888877777545688999999999999 66 7999999
Q ss_pred cCccc
Q 011138 285 GSAKM 289 (492)
Q Consensus 285 G~a~~ 289 (492)
-+++.
T Consensus 366 klsRl 370 (488)
T COG5072 366 KLSRL 370 (488)
T ss_pred eeeec
Confidence 99984
No 492
>PF03881 Fructosamin_kin: Fructosamine kinase; InterPro: IPR016477 Ketosamines derive from a non-enzymatic reaction between a sugar and a protein []. Ketosamine-3-kinases (KT3K), of which fructosamine-3-kinase (FN3K) is the best-known example, catalyse the phosphorylation of the ketosamine moiety of glycated proteins. The instability of a phosphorylated ketosamine leads to its degradation, and KT3K is thus thought to be involved in protein repair []. The function of the prokaryotic members of this group has not been established. However, several lines of evidence indicate that they may function as fructosamine-3-kinases (FN3K). First, they are similar to characterised FN3K from mouse and human. Second, the Escherichia coli members are found in close proximity on the genome to fructose-6-phosphate kinase (PfkB). Last, FN3K activity has been found in a Anacystis montana (Gloeocapsa montana Kutzing 1843) [], indicating such activity-directly demonstrated in eukaryotes-is nonetheless not confined to eukaryotes. This family includes eukaryotic fructosamine-3-kinase enzymes [] which may initiate a process leading to the deglycation of fructoselysine and of glycated proteins and in the phosphorylation of 1-deoxy-1-morpholinofructose, fructoselysine, fructoseglycine, fructose and glycated lysozyme. The family also includes bacterial members that have not been characterised but probably have a similar or identical function. For additional information please see [].; PDB: 3JR1_B 3F7W_A.
Probab=95.14 E-value=0.12 Score=50.56 Aligned_cols=72 Identities=15% Similarity=0.129 Sum_probs=43.4
Q ss_pred eeeeccCCceEEEEEEEcCCCCEEEEEEeccc-hhhHHHHHHHHHHcC---CCCccccceeeeeccCCCceEEEEEeeec
Q 011138 142 ERVVGTGSFGVVFQAKCLETGDSVAIKKVLQD-KRYKNRELQIMRLLN---HPNVVSLKHCFFSTTEKDELYLNLVLEYI 217 (492)
Q Consensus 142 ~~~lG~G~fg~Vy~~~~~~~g~~vAiK~~~~~-~~~~~~E~~il~~l~---h~nIv~l~~~~~~~~~~~~~~~~lV~E~~ 217 (492)
.+.++.|....+|+.. .+++.+.||+-... ...++.|.+-|+.|. --.+++++.+..... . -+|||||+
T Consensus 22 ~~~v~GG~i~~a~~~~--~~~~~~FvK~~~~~~~~~f~~Ea~gL~~L~~~~~~~vP~vi~~G~~~~---~--~fLlle~l 94 (288)
T PF03881_consen 22 IEPVSGGDINEAYRLD--TDGGSYFVKVNSESGRDMFEGEAEGLKALAEANPIRVPKVIAWGEYDD---D--AFLLLEFL 94 (288)
T ss_dssp EEEE--SSSSEEEEEE--TTS-EEEEEEEEGGGCCHHHHHHHHHHHHCHTTTSBS--EEEEEE-SS---C--CEEEEE--
T ss_pred eEecCCCChhheEEEE--CCCccEEEEecChhhHHHHHHHHHHHHHHHhcCCCCCCeEEEEEeecC---C--ceEEEEee
Confidence 3568889999999986 67888999977533 446778999999884 334667766553222 1 36999998
Q ss_pred hhh
Q 011138 218 SET 220 (492)
Q Consensus 218 ~~~ 220 (492)
+.+
T Consensus 95 ~~~ 97 (288)
T PF03881_consen 95 EMG 97 (288)
T ss_dssp ---
T ss_pred cCC
Confidence 643
No 493
>PTZ00384 choline kinase; Provisional
Probab=94.90 E-value=0.38 Score=49.10 Aligned_cols=29 Identities=31% Similarity=0.370 Sum_probs=24.4
Q ss_pred CCcccCCCCCCceEEcCCCCcEEEeeecCcc
Q 011138 258 VGVCHRDIKPQNLLVNPHTHQLKICDFGSAK 288 (492)
Q Consensus 258 ~givHrDlKp~NILl~~~~~~vkL~DFG~a~ 288 (492)
...+|.||-+.||+.+.+ .+.++||-.|.
T Consensus 227 ~VfCHNDL~~gNIL~~~~--~l~lID~EYA~ 255 (383)
T PTZ00384 227 VLFCHNDLFFTNILDFNQ--GIYFIDFDFAG 255 (383)
T ss_pred eeeeeccCCcccEEecCC--CEEEEEecccc
Confidence 467999999999998754 49999998774
No 494
>PF07387 Seadorna_VP7: Seadornavirus VP7; InterPro: IPR009973 This family consists of several Seadornavirus specific VP7 proteins of around 305 residues in length. The function of this family is unknown.
Probab=93.64 E-value=0.24 Score=45.94 Aligned_cols=86 Identities=16% Similarity=0.215 Sum_probs=57.3
Q ss_pred hHHHHHHHHHHcCCCCccccceeeeeccCCCceEEEEEeeechhhHHHHhhhhhhcCCCcCHHHHHHHHHHHHHHHHHHH
Q 011138 176 YKNRELQIMRLLNHPNVVSLKHCFFSTTEKDELYLNLVLEYISETVYRVSKHYTRMNQHVPILYVQLYTYQICRALNYLH 255 (492)
Q Consensus 176 ~~~~E~~il~~l~h~nIv~l~~~~~~~~~~~~~~~~lV~E~~~~~l~~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~yLH 255 (492)
....+..++.++. .|+++.. .+...+.+|+|+|-.--.. + .-.+. -=+.+|.-.|
T Consensus 104 ~y~nky~v~Armh--GilrL~N-------Dn~~~yGvIlE~Cy~~~i~------------~---~N~i~-agi~~L~~fH 158 (308)
T PF07387_consen 104 LYFNKYRVFARMH--GILRLKN-------DNNYKYGVILERCYKIKIN------------F---SNFIT-AGIKDLMDFH 158 (308)
T ss_pred hhhhhhhHHHHhh--heeEeec-------CCCceeEEEEeeccCcccc------------h---hHHHH-HhHHHHHHhh
Confidence 3456888888764 5777642 2334467899998632100 0 01111 1145677778
Q ss_pred -hhCCcccCCCCCCceEEcCCCCcEEEeeecCc
Q 011138 256 -HVVGVCHRDIKPQNLLVNPHTHQLKICDFGSA 287 (492)
Q Consensus 256 -~~~givHrDlKp~NILl~~~~~~vkL~DFG~a 287 (492)
+..+.+|+|-.|+||+-|+.| .+||.|-+..
T Consensus 159 ~~~~~~lHGD~np~NiM~D~~G-~lKlVDP~~L 190 (308)
T PF07387_consen 159 SENQHCLHGDCNPDNIMCDKFG-YLKLVDPVCL 190 (308)
T ss_pred ccCCCeecCCCChhheeecCCC-CEEecChhhh
Confidence 335799999999999999998 7999998864
No 495
>PRK11768 serine/threonine protein kinase; Provisional
Probab=93.59 E-value=1.2 Score=44.47 Aligned_cols=28 Identities=25% Similarity=0.348 Sum_probs=23.9
Q ss_pred CCcccCCCCCCceEEcCCCCcEEEeeecCcc
Q 011138 258 VGVCHRDIKPQNLLVNPHTHQLKICDFGSAK 288 (492)
Q Consensus 258 ~givHrDlKp~NILl~~~~~~vkL~DFG~a~ 288 (492)
.++||+|+.+.|||++ + .+.|+||+-+.
T Consensus 196 ~~liHgD~h~~NvL~~-d--~~~iIDFDd~~ 223 (325)
T PRK11768 196 LLRLHGDCHPGNILWR-D--GPHFVDLDDAR 223 (325)
T ss_pred ccceecCCCchhcccc-C--CcEEEeCCCCC
Confidence 4789999999999995 4 37899999875
No 496
>KOG1236 consensus Predicted unusual protein kinase [General function prediction only]
Probab=93.15 E-value=0.23 Score=50.09 Aligned_cols=61 Identities=26% Similarity=0.243 Sum_probs=36.0
Q ss_pred EEEeeechhh-HHHHhhhhhhcCCCcCHHHHHHHHHHHHHHHHHHHhhCCcccCCCCCCceEEcCCC
Q 011138 211 NLVLEYISET-VYRVSKHYTRMNQHVPILYVQLYTYQICRALNYLHHVVGVCHRDIKPQNLLVNPHT 276 (492)
Q Consensus 211 ~lV~E~~~~~-l~~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~yLH~~~givHrDlKp~NILl~~~~ 276 (492)
.||-+|..|- +...++. ...++...+.++.-.+.||--+--..+++|.|+.|.||++..+.
T Consensus 321 vl~E~~~~Gl~v~~~v~~-----~~~pe~l~kkva~lg~~AllkMl~vDNFvHaDlHPGNVlirf~~ 382 (565)
T KOG1236|consen 321 VLVETYERGLSVLRFVKW-----KSQPEALVKKVAKLGVNALLKMLIVDNFVHADLHPGNVLIRFNK 382 (565)
T ss_pred eeeeeccccccHHhhhhc-----ccChHHHHHHHHHHHHHHHHHHHHhhcceecccCCCcEEEEecC
Confidence 3555666653 2333222 33444555555555555554443246999999999999995443
No 497
>PRK10271 thiK thiamine kinase; Provisional
Probab=92.10 E-value=0.12 Score=46.90 Aligned_cols=29 Identities=24% Similarity=0.335 Sum_probs=24.9
Q ss_pred CcccCCCCCCceEEcCCCCcEEEeeecCccc
Q 011138 259 GVCHRDIKPQNLLVNPHTHQLKICDFGSAKM 289 (492)
Q Consensus 259 givHrDlKp~NILl~~~~~~vkL~DFG~a~~ 289 (492)
-.+|+|+.|.||+++.++ ++|+||+.|..
T Consensus 78 ~p~H~D~~~~N~~~~~~~--~~lIDwe~a~~ 106 (188)
T PRK10271 78 APLHMDVHAGNLVHSASG--LRLIDWEYAGD 106 (188)
T ss_pred eeecCCCCCccEEEECCC--EEEEeCCcccC
Confidence 369999999999998654 89999999864
No 498
>PF01633 Choline_kinase: Choline/ethanolamine kinase; InterPro: IPR002573 Choline kinase, (ATP:choline phosphotransferase, 2.7.1.32 from EC) belongs to the choline/ethanolamine kinase family. Ethanolamine and choline are major membrane phospholipids, in the form of glycerophosphoethanolamine and glycerophosphocholine. Ethanolamine is also a component of the glycosylphosphatidylinositol (GPI) anchor, which is necessary for cell-surface protein attachment []. The de novo synthesis of these phospholipids begins with the creation of phosphoethanolamine and phosphocholine by ethanolamine and choline kinases in the first step of the CDP-ethanolamine pathway [, ]. There are two putative choline/ethanolamine kinases (C/EKs) in the Trypanosoma brucei genome. Ethanolamine kinase has no choline kinase activity [] and its activity is inhibited by ADP []. Inositol supplementation represses ethanolamine kinase, decreasing the incorporation of ethanolamine into the CDP-ethanolamine pathway and into phosphatidylethanolamine and phosphatidylcholine []. ; GO: 0016773 phosphotransferase activity, alcohol group as acceptor; PDB: 3C5I_A 2IG7_A 3LQ3_A 3FEG_A 2QG7_E 3FI8_A 1NW1_A 3MES_A 3G15_A 2CKP_B ....
Probab=91.26 E-value=0.2 Score=46.45 Aligned_cols=30 Identities=37% Similarity=0.736 Sum_probs=19.7
Q ss_pred CCcccCCCCCCceEE-cCCCCcEEEeeecCcc
Q 011138 258 VGVCHRDIKPQNLLV-NPHTHQLKICDFGSAK 288 (492)
Q Consensus 258 ~givHrDlKp~NILl-~~~~~~vkL~DFG~a~ 288 (492)
..++|+||.|.|||+ +.++ .++|+||..|.
T Consensus 143 ~v~cHnDl~~~Nil~~~~~~-~~~lIDfEya~ 173 (211)
T PF01633_consen 143 LVFCHNDLNPGNILINNKDG-EVKLIDFEYAG 173 (211)
T ss_dssp EEEE-S--SGGGEEETSSSS-CEEE--GTT-E
T ss_pred ceEeeccCccccEEeccCCC-eEEEecHHHHh
Confidence 358999999999999 4454 79999999875
No 499
>KOG2269 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=91.15 E-value=0.27 Score=48.12 Aligned_cols=131 Identities=21% Similarity=0.231 Sum_probs=84.1
Q ss_pred EeeeeccCCceEEEEEEEc------C----CCCEEEEEEeccc--------------hhh----------------HHHH
Q 011138 141 AERVVGTGSFGVVFQAKCL------E----TGDSVAIKKVLQD--------------KRY----------------KNRE 180 (492)
Q Consensus 141 ~~~~lG~G~fg~Vy~~~~~------~----~g~~vAiK~~~~~--------------~~~----------------~~~E 180 (492)
+..+|..|--+.|+-|.-- . .-..+|||+++.. -++ .++|
T Consensus 256 i~GiIsTGKEsvvlHAY~GS~E~~~qd~ql~ptecAIKvfKTTLnEFKnRd~YiKDDfRFKDRFSK~NpR~i~~mWAEkE 335 (531)
T KOG2269|consen 256 IDGIISTGKESVVLHAYAGSNEHGHQDPQLSPTECAIKVFKTTLNEFKNRDEYIKDDFRFKDRFSKQNPRGILKMWAEKE 335 (531)
T ss_pred hhhhhhcCcceEEEEeccCcccccccCcccCchHHHHHHHHHHHHHHhhhhhhhccchhhhhhhcccCcHHHHHHHHHHH
Confidence 3456888888888877320 0 1245888866211 111 1235
Q ss_pred HHHHHHc-----CCCCccccceeeeeccCCCceEEEEEeeechhhHHHHhhhhhhcCCCcCHHHHHHHHHHHHHHHHHHH
Q 011138 181 LQIMRLL-----NHPNVVSLKHCFFSTTEKDELYLNLVLEYISETVYRVSKHYTRMNQHVPILYVQLYTYQICRALNYLH 255 (492)
Q Consensus 181 ~~il~~l-----~h~nIv~l~~~~~~~~~~~~~~~~lV~E~~~~~l~~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~yLH 255 (492)
..-|.++ .+|-+|.+..+ .|||-|++..-+. .-...+-.++..+.+..-.|++.++.-|-
T Consensus 336 mhNL~RMq~~GlpcP~vV~lkkh------------vLVMsFiGd~~~a---APkLK~v~l~d~E~~~aY~q~~~~M~~lY 400 (531)
T KOG2269|consen 336 MHNLSRMQKHGLPCPQVVKLKKH------------VLVMSFIGDQGLA---APKLKNVELTDDERRNAYDQVQSIMCRLY 400 (531)
T ss_pred HHHHHHHHhcCCCCCceeeeecc------------eEEEEeecCCCCC---CccccccccChHHHHHHHHHHHHHHHHHH
Confidence 5445544 36778877543 3899999753111 11112344777777777789998888774
Q ss_pred hhCCcccCCCCCCceEEcCCCCcEEEeeecCcc
Q 011138 256 HVVGVCHRDIKPQNLLVNPHTHQLKICDFGSAK 288 (492)
Q Consensus 256 ~~~givHrDlKp~NILl~~~~~~vkL~DFG~a~ 288 (492)
...-+||-||.--|+|...+ .|-++|-.-+.
T Consensus 401 ~Ec~LVHADlSEyN~Lw~~g--Kvw~IDVsQsv 431 (531)
T KOG2269|consen 401 KECLLVHADLSEYNLLWTPG--KVWVIDVSQSV 431 (531)
T ss_pred HhhheeecchhhhhheecCC--ceEEEechhcc
Confidence 33789999999999999965 58999987654
No 500
>smart00587 CHK ZnF_C4 abd HLH domain containing kinases domain. subfamily of choline kinases
Probab=91.12 E-value=0.45 Score=43.61 Aligned_cols=32 Identities=16% Similarity=0.279 Sum_probs=26.3
Q ss_pred CCcccCCCCCCceEEcCCCC----cEEEeeecCccc
Q 011138 258 VGVCHRDIKPQNLLVNPHTH----QLKICDFGSAKM 289 (492)
Q Consensus 258 ~givHrDlKp~NILl~~~~~----~vkL~DFG~a~~ 289 (492)
..++|||+.+.||++..++. .+.|+||..+..
T Consensus 120 ~vl~HgD~~~~N~~~~~~~~~~~~~~~liDfq~~~~ 155 (196)
T smart00587 120 NVLNHGDLWANNIMFKYDDEGKPEDVALIDFQLSHY 155 (196)
T ss_pred eEEeeCCCCccceeeccCCCCCccceEEEecccCCc
Confidence 46899999999999975532 589999998853
Done!