Query 011141
Match_columns 492
No_of_seqs 277 out of 2216
Neff 8.1
Searched_HMMs 29240
Date Mon Mar 25 21:39:31 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/011141.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/011141hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 1qdm_A Prophytepsin; aspartic 100.0 2.4E-81 8.3E-86 661.9 35.2 456 31-492 1-456 (478)
2 3psg_A Pepsinogen; hydrolase(a 100.0 1.1E-64 3.8E-69 519.6 32.2 346 30-492 1-348 (370)
3 2x0b_A Renin; hydrolase-hormon 100.0 5.6E-64 1.9E-68 515.8 30.3 352 28-492 6-361 (383)
4 1tzs_A Cathepsin E; hydrolase, 100.0 8.9E-58 3.1E-62 465.7 31.0 310 76-492 11-320 (351)
5 1dpj_A Proteinase A; proteinas 100.0 6.5E-57 2.2E-61 455.4 31.4 304 78-492 3-307 (329)
6 3cms_A Chymosin B; hydrolase, 100.0 5.3E-57 1.8E-61 454.9 30.2 299 77-492 3-301 (323)
7 3k1w_A Renin; protease, altern 100.0 5.5E-57 1.9E-61 458.0 29.5 310 76-492 6-318 (341)
8 4aa9_A Chymosin; hydrolase, as 100.0 1.1E-56 3.8E-61 451.9 28.7 296 79-491 2-297 (320)
9 1htr_B Gastricsin; aspartyl pr 100.0 1E-56 3.6E-61 453.9 28.3 303 79-492 4-307 (329)
10 1am5_A Pepsin, acid proteinase 100.0 1.9E-56 6.6E-61 450.9 29.5 300 79-492 3-302 (324)
11 3qvc_A Histo-aspartic protease 100.0 3E-56 1E-60 466.5 29.2 299 76-492 125-427 (451)
12 1miq_A Plasmepsin; aspartic pr 100.0 4.4E-56 1.5E-60 456.6 28.8 299 76-492 50-352 (375)
13 2bju_A Plasmepsin II; aspartic 100.0 8.8E-56 3E-60 462.5 28.2 300 76-492 126-428 (453)
14 1yg9_A Aspartic protease BLA G 100.0 2.3E-54 8E-59 436.7 26.6 296 77-492 6-307 (330)
15 1mpp_A Pepsin; hydrolase(acid 100.0 2.2E-54 7.4E-59 442.4 26.6 304 76-492 6-333 (361)
16 3c9x_A Trichoderma reesei aspa 100.0 5.1E-52 1.7E-56 419.5 31.9 292 84-492 11-308 (329)
17 1oew_A Endothiapepsin; hydrola 100.0 5.7E-52 2E-56 419.1 30.3 289 86-492 13-307 (329)
18 2apr_A Rhizopuspepsin; hydrola 100.0 1.2E-51 4E-56 416.2 32.4 289 84-492 11-302 (325)
19 3fv3_A SAPP1P-secreted asparti 100.0 2.3E-50 8E-55 409.0 29.6 290 78-491 3-306 (339)
20 2qzx_A Candidapepsin-5; aspart 100.0 3.7E-50 1.3E-54 408.0 30.8 292 78-492 3-309 (342)
21 1ibq_A Aspergillopepsin; aspar 100.0 5.7E-50 2E-54 403.8 31.9 287 86-492 12-303 (325)
22 1j71_A Candidapepsin, aspartic 100.0 3.1E-50 1.1E-54 407.3 28.8 287 78-492 3-302 (334)
23 1izd_A Aspartic proteinase; su 100.0 3.8E-50 1.3E-54 404.8 29.0 284 86-492 13-301 (323)
24 3pvk_A Candidapepsin-2; hydrol 100.0 1.8E-49 6E-54 403.0 29.4 293 78-492 3-309 (342)
25 1bxo_A Protein (penicillopepsi 100.0 5.1E-50 1.8E-54 403.8 25.3 284 86-492 13-301 (323)
26 1wkr_A Polyporopepsin; hydrola 100.0 2.1E-49 7.1E-54 402.2 29.0 290 78-492 3-311 (340)
27 1b5f_A Protein (cardosin A); h 100.0 9.6E-49 3.3E-53 377.8 25.3 238 77-318 2-239 (239)
28 3lpj_A Beta-secretase 1; alzhe 100.0 1.1E-48 3.8E-53 411.8 24.3 232 81-318 67-313 (455)
29 2ewy_A Beta-secretase 2; BACE2 100.0 1.5E-47 5.1E-52 394.7 27.2 232 81-318 6-249 (383)
30 3vf3_A Beta-secretase 1; struc 100.0 2.6E-47 8.9E-52 395.4 24.9 231 82-318 22-267 (402)
31 2qp8_A Beta-secretase 1; BACE1 100.0 4.9E-47 1.7E-51 392.5 25.7 232 81-318 14-260 (395)
32 3aup_A SBG7S, BG, basic 7S glo 100.0 3.6E-46 1.2E-50 386.8 25.0 303 77-492 9-364 (403)
33 3vla_A EDGP; extracellular, in 100.0 5.4E-46 1.9E-50 385.9 19.3 233 76-318 7-294 (413)
34 1t6e_X Xylanase inhibitor; two 100.0 9.7E-43 3.3E-47 358.5 16.8 222 79-318 4-258 (381)
35 1lya_B Cathepsin D; lysosomal 100.0 1.8E-37 6.1E-42 299.3 22.3 219 169-492 1-219 (241)
36 1lya_A Cathepsin D; lysosomal 99.9 1E-23 3.5E-28 173.3 10.8 93 78-170 3-96 (97)
37 3rfi_A Asp; PSI, saposin, hydr 99.7 4E-18 1.4E-22 142.4 3.0 107 316-423 2-108 (108)
38 1b5f_B Protein (cardosin A); h 99.3 1.6E-12 5.3E-17 104.4 5.0 65 427-492 1-65 (87)
39 3bqp_A Proactivator polypeptid 97.9 4.3E-06 1.5E-10 65.2 3.3 48 385-435 2-49 (80)
40 2qyp_A Proactivator polypeptid 97.9 2E-06 6.8E-11 69.0 1.4 49 384-435 4-52 (91)
41 1l9l_A Granulysin; saposin fol 97.8 8.9E-06 3E-10 62.4 2.8 40 385-425 1-40 (74)
42 4ddj_A Saposin-A, protein A; s 97.8 1.1E-05 3.7E-10 63.5 3.4 41 385-425 3-43 (83)
43 1nkl_A NK-lysin; saposin fold, 97.7 1.2E-05 4E-10 62.5 2.5 40 385-424 1-40 (78)
44 1of9_A Pore-forming peptide am 97.7 1.5E-05 5.1E-10 61.7 2.9 41 385-426 2-42 (77)
45 2gtg_A Proactivator polypeptid 97.6 3.1E-05 1.1E-09 60.8 3.7 41 384-424 3-43 (83)
46 1n69_A Saposin B; lipid bindin 97.6 4.2E-05 1.4E-09 59.8 3.3 42 384-425 2-44 (81)
47 2js9_A Saposin-like protein fa 97.3 2.4E-05 8.1E-10 63.5 -0.8 51 383-435 19-69 (99)
48 2qyp_A Proactivator polypeptid 94.0 0.026 8.9E-07 44.6 2.6 41 321-361 46-86 (91)
49 2i1a_A DNA damage-inducible pr 93.6 0.11 3.6E-06 44.9 6.0 96 81-201 18-115 (148)
50 3bqp_A Proactivator polypeptid 93.0 0.044 1.5E-06 41.9 2.3 37 321-357 43-79 (80)
51 2js9_A Saposin-like protein fa 92.5 0.032 1.1E-06 44.9 0.9 38 320-357 62-99 (99)
52 1nkl_A NK-lysin; saposin fold, 91.8 0.07 2.4E-06 40.8 2.1 37 321-357 41-77 (78)
53 2gtg_A Proactivator polypeptid 91.3 0.04 1.4E-06 42.6 0.1 38 321-358 45-82 (83)
54 1of9_A Pore-forming peptide am 90.8 0.037 1.3E-06 42.3 -0.4 38 319-356 40-77 (77)
55 3s8i_A Protein DDI1 homolog 1; 88.8 0.59 2E-05 40.4 5.6 91 87-201 22-114 (148)
56 4ddj_A Saposin-A, protein A; s 88.0 0.089 3.1E-06 40.6 -0.2 37 321-357 45-82 (83)
57 1n69_A Saposin B; lipid bindin 87.7 0.1 3.6E-06 40.1 0.0 37 320-357 44-80 (81)
58 1l9l_A Granulysin; saposin fol 85.8 0.18 6.2E-06 38.1 0.4 33 321-353 41-73 (74)
59 3s64_A AC-SLP-1, saposin-like 83.7 0.13 4.5E-06 40.1 -1.2 40 383-424 8-47 (87)
60 3vcm_P Prorenin; aspartic prot 81.3 1 3.4E-05 30.0 2.6 25 29-53 7-31 (43)
61 2hs1_A HIV-1 protease; ultra-h 76.7 3.1 0.00011 33.1 4.7 30 90-121 9-38 (99)
62 1fmb_A EIAV protease; hydrolas 74.3 3.2 0.00011 33.4 4.2 27 90-118 9-35 (104)
63 3ec0_A Protease; HIV-2, inhibi 71.3 4.8 0.00017 32.0 4.5 29 91-121 10-38 (99)
64 3liy_A Protease; hydrolase, hy 68.2 4.8 0.00017 32.8 3.9 32 91-122 12-46 (116)
65 2i1a_A DNA damage-inducible pr 61.6 6.1 0.00021 33.5 3.7 29 276-311 31-59 (148)
66 3s64_A AC-SLP-1, saposin-like 60.5 4.5 0.00015 31.4 2.2 52 305-356 35-87 (87)
67 1tzs_P Activation peptide from 60.5 2.8 9.7E-05 25.7 1.0 23 29-51 2-24 (35)
68 3s8i_A Protein DDI1 homolog 1; 60.0 6 0.0002 33.9 3.3 28 277-311 30-57 (148)
69 1htr_P Progastricsin (Pro segm 59.4 3.4 0.00012 26.8 1.3 24 30-53 2-25 (43)
70 2hah_A Protease, retropepsin; 58.7 9 0.00031 31.4 3.9 28 90-120 15-42 (116)
71 3sqf_A Protease; folded monome 55.3 12 0.0004 30.6 4.0 30 90-121 10-39 (114)
72 3slz_A GAG-Pro-POL polyprotein 50.1 19 0.00063 30.2 4.6 31 89-121 22-52 (132)
73 2rsp_A RSV protease; hydrolase 41.2 27 0.00093 28.8 4.1 25 96-122 27-51 (124)
74 3ka2_A [L-Ala51;Gly51']HIV-1 p 39.0 26 0.00088 31.6 4.0 29 90-120 9-37 (203)
75 1ssz_A Pulmonary surfactant-as 36.1 16 0.00056 21.8 1.5 18 388-405 1-18 (34)
76 1bxo_A Protein (penicillopepsi 35.9 30 0.001 33.2 4.4 43 255-307 3-45 (323)
77 1ibq_A Aspergillopepsin; aspar 34.9 33 0.0011 33.0 4.4 42 256-307 3-44 (325)
78 2dwf_A Pulmonary surfactant-as 33.4 20 0.0007 21.9 1.6 18 388-405 1-18 (34)
79 1izd_A Aspartic proteinase; su 32.8 36 0.0012 32.6 4.4 42 256-307 4-45 (323)
80 1lya_A Cathepsin D; lysosomal 28.9 19 0.00066 28.1 1.3 33 266-306 12-44 (97)
81 1mpp_A Pepsin; hydrolase(acid 25.0 54 0.0019 31.8 4.1 44 255-306 4-49 (361)
82 3vdj_A Circumsporozoite (CS) p 23.6 53 0.0018 24.6 2.7 29 406-434 6-34 (77)
83 1oew_A Endothiapepsin; hydrola 22.7 70 0.0024 30.6 4.3 42 257-306 4-46 (329)
84 3c9x_A Trichoderma reesei aspa 22.0 74 0.0025 30.4 4.3 43 257-307 4-47 (329)
85 3f0i_A Arsenate reductase; str 21.0 97 0.0033 24.9 4.2 36 384-419 10-54 (119)
86 3ka2_A [L-Ala51;Gly51']HIV-1 p 20.2 1.1E+02 0.0037 27.5 4.6 30 90-121 113-142 (203)
87 2apr_A Rhizopuspepsin; hydrola 20.1 88 0.003 29.8 4.4 41 258-306 6-46 (325)
No 1
>1qdm_A Prophytepsin; aspartic proteinases, saposin-like domain, zymogen structure, hydrolase; 2.30A {Hordeum vulgare} SCOP: a.64.1.2 b.50.1.2
Probab=100.00 E-value=2.4e-81 Score=661.85 Aligned_cols=456 Identities=71% Similarity=1.252 Sum_probs=380.1
Q ss_pred EEEeccccCcchhhhhhhcccccccchhhhhhccccccCCCCCCCCcceEeceecCCceEEEEEEecCCCceEEEEEeCC
Q 011141 31 YRIGLKKRKFDLNNRVAARLDSKEGESFRTSIRKYSLRGNLGESGDADIVALKNYMDAQYFGEIGIGTPPQNFTVIFDTG 110 (492)
Q Consensus 31 ~~ipL~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~Y~~~i~iGtP~Q~~~v~lDTG 110 (492)
+||||+|+++.++.+.+.+......+++ .+++. ...++++...+||.|+.+.+|+++|+||||||+|.|+||||
T Consensus 1 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~---~~~~~---~~~~~~~~~~~~l~n~~~~~Y~~~i~IGTP~Q~~~v~~DTG 74 (478)
T 1qdm_A 1 VRIALKKRPIDRNSRVATGLSGGEEQPL---LSGAN---PLRSEEEGDIVALKNYMNAQYFGEIGVGTPPQKFTVIFDTG 74 (478)
T ss_dssp CEEEEEECCCCHHHHHHHHTC----------------------CCSSCSGGGCCGGGCCEEEEEEETTTTEEEEEEEETT
T ss_pred CeeeeeeccchHHHHHhcchhhhhHHHH---Hhhcc---cccCcCCCceEEeEeccCCEEEEEEEECCCCeEEEEEEcCC
Confidence 4899999999999888766432211101 11111 11222345679999999999999999999999999999999
Q ss_pred CCCeeeeCCCCCCCccccCCCCCCCCCCCceeeCCceEEEEecCCeeEeeEEEeEEEECceeecccEEEEEEecCCcccc
Q 011141 111 SSNLWVPSSKCYFSIACYFHSKYRSGRSSTYKKNGKSADIHYGTGAISGFFSEDHVKIGDLVVKDQEFIEATREPSLTFL 190 (492)
Q Consensus 111 Ss~~WV~~~~C~~~~~C~~~~~y~~~~SsT~~~~~~~~~i~Yg~gs~~G~~~~D~v~~g~~~v~~~~fg~~~~~~~~~~~ 190 (492)
|+++||++..|.....|..|+.|||++|+||+..++.|.+.|++|+++|.+++|+|+||+..++++.||++....+..|.
T Consensus 75 Ss~lWV~~~~C~~~~~C~~~~~y~~~~SsT~~~~~~~~~i~Yg~Gs~~G~~~~Dtv~ig~~~v~~~~Fg~a~~~~~~~f~ 154 (478)
T 1qdm_A 75 SSNLWVPSAKCYFSIACYLHSRYKAGASSTYKKNGKPAAIQYGTGSIAGYFSEDSVTVGDLVVKDQEFIEATKEPGITFL 154 (478)
T ss_dssp CCCCEEEBTTCCSCGGGGGSCCBCGGGCTTCBCCCCEEEEEETTEEEEEEEEEEEEEETTEEEEEEEEEEEEECCBSHHH
T ss_pred CcceEEecCCCCCCccccCCCCCCcccCCCeeeCCcEEEEEcCCCCeEEEEEEEEEEECCeEECCEEEEEEEecCCcccc
Confidence 99999999999644689999999999999999999999999999999999999999999999999999999987665566
Q ss_pred ccccceeecCCcccccCCCCCchHHHHHhcCCCCCCeEEEEecCCCCCCCCcEEEeCcccCCCCcccceEEeccCccceE
Q 011141 191 LAKFDGILGLGFQEISVGKAVPVWYNMVNQGLVNEPVFSFWFNRNADEEEGGEIVFGGMDPDHYKGEHTYVPVTQKGYWQ 270 (492)
Q Consensus 191 ~~~~dGIlGLg~~~~s~~~~~~~~~~L~~qg~I~~~~FSl~l~~~~~~~~~G~L~fGgiD~~~~~g~l~~~p~~~~~~w~ 270 (492)
...++||||||++..+.....|++++|++||+|++++||+||.+..+...+|+|+|||+|+++|.|++.|+|+...++|.
T Consensus 155 ~~~~dGIlGLg~~~~s~~~~~p~~~~l~~qg~i~~~~FS~~L~~~~~~~~~G~l~fGg~d~~~~~G~l~~~pv~~~~~w~ 234 (478)
T 1qdm_A 155 VAKFDGILGLGFKEISVGKAVPVWYKMIEQGLVSDPVFSFWLNRHVDEGEGGEIIFGGMDPKHYVGEHTYVPVTQKGYWQ 234 (478)
T ss_dssp HCSSSEEEECSCGGGCGGGCCCHHHHHTTTTCCSSSEEEEECCCC-----CEEEEETCCCTTSEEEEEEEEEEEEETTEE
T ss_pred cccccceecccccccccCCCCcHHHHHHHCCCCCCCEEEEEeecCCCCCCCeEEEeCCcCHhhcCCCceEEeccCCCeEE
Confidence 67889999999999887778899999999999999999999988643334899999999999999999999999899999
Q ss_pred EEeceEEEcCccccccCCCceEEEcCCCCceeccHHHHHHHHHHhCCccccccccchhhcchhHHHHHHhhcccCccccc
Q 011141 271 FDMGDVMIDGQTTGFCAGGCAAIADSGTSLLAGPTTIITQVNHAIGATGIVSQECKAVVSQYGEEIINMLLAKDEPQKIC 350 (492)
Q Consensus 271 v~l~~i~vg~~~~~~~~~~~~aiiDTGtt~i~lP~~~~~~l~~~i~~~~~~~~~C~~~~~~y~~~~~~~~~~~~~~~~~c 350 (492)
|.+++|.|+++.+.++..++.+++||||+++++|.+++++|.+++++.+.+..+|+..+..|++.+++++++...|+++|
T Consensus 235 v~l~~i~v~g~~~~~~~~~~~aiiDTGTs~~~lP~~~~~~i~~~i~a~~~~s~~Ck~~v~~yg~~ii~~l~~~~~p~~vC 314 (478)
T 1qdm_A 235 FDMGDVLVGGKSTGFCAGGCAAIADSGTSLLAGPTAIITEINEKIGAAGVVSQECKTIVSQYGQQILDLLLAETQPKKIC 314 (478)
T ss_dssp EEECCEEETTEECSTTTTCEEEEECSSCCSEEECHHHHHHHHHHHTCCCBCCHHHHHHHHHTHHHHHHHHHTTCCHHHHH
T ss_pred EEEeEEEECCEEEeecCCCceEEEcCCCCceeCCHHHHHHHHHHhCccccccccccchhhhhhhHHHHhhhhccChhhhh
Confidence 99999999998876666788999999999999999999999999999988899999999999999999999999999999
Q ss_pred ccccccccCCCCcccccccccccccCCCCCCCCCcccCchhHHHHHHHHHHHhhhchHHHHHHHHHhhcccCCCCCCcee
Q 011141 351 SQIGLCTFDGSRGVSMGIESVVPENNHRASGGFHDAMCSTCEMAVVWMQNQLKQNQTQERILNYVNELCDRLPSPMGESA 430 (492)
Q Consensus 351 ~~~~~C~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~ 430 (492)
.+.++|.+++....+.+++.|++++++.++...++.+|.+|||++.|+|++|.+|.|+++|+++++++|+++|...|.|.
T Consensus 315 ~~iglC~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~C~~Ce~~v~~~~~~l~~n~t~~~I~~~~~~~C~~~~~~~g~~~ 394 (478)
T 1qdm_A 315 SQVGLCTFDGTRGVSAGIRSVVDDEPVKSNGLRADPMCSACEMAVVWMQNQLAQNKTQDLILDYVNQLCNRLPSPMGESA 394 (478)
T ss_dssp HHTTCC---------------------------CHHHHHHHHHHHHHHHHHHHTTCCHHHHHHHHHHHTTCBCCSSSCCE
T ss_pred ccccccccCccccccccccccccccccccccccccccchHHHHHHHHHHHHHhccccHHHHHHHHHHHhhccCCCCCeEE
Confidence 99999999999888999999999998888888889999999999999999999999999999999999999999999999
Q ss_pred eeCccCCCCCcEEEEECCEEEeeCcCcceEEeCcCCcceeeeceeecccCCCCCCeEEEcCC
Q 011141 431 VDCSRLSSLPIVSFTIGGKIFDLTPDQYILKVGEGDAAQCISGFSALDVAPPRGPLWYVYSC 492 (492)
Q Consensus 431 ~~c~~~~~~p~~~f~~~~~~~~l~~~~y~~~~~~~~~~~C~~~~~~~~~~~~~~~~~ilg~~ 492 (492)
++|+.+..+|+|+|+|+|+.|+|+|++|+++..+++...|+++|++.+++++.++.|||||+
T Consensus 395 v~C~~~~~lP~i~f~~gg~~~~l~p~~yi~~~~~~~~~~C~~~~~~~~~~~~~~~~~ILGd~ 456 (478)
T 1qdm_A 395 VDCGSLGSMPDIEFTIGGKKFALKPEEYILKVGEGAAAQCISGFTAMDIPPPRGPLWILGDV 456 (478)
T ss_dssp ECGGGGTTCCCEEEEETTEEEEECHHHHEEECSCGGGCCEEESEEECCCCTTSCSEEEECHH
T ss_pred eecccccccccEEEEECCEEEEEChHHhEEEccCCCCCeEEEEEEeccCCCCCCCcEEECHH
Confidence 99999999999999999999999999999997665456899999999987777899999984
No 2
>3psg_A Pepsinogen; hydrolase(acid proteinase zymogen); 1.65A {Sus scrofa} SCOP: b.50.1.2 PDB: 2psg_A 4pep_A* 3pep_A* 1f34_A* 1psa_A* 1yx9_A 5pep_A 1flh_A 1qrp_E* 1psn_A* 1pso_E* 3utl_A
Probab=100.00 E-value=1.1e-64 Score=519.61 Aligned_cols=346 Identities=40% Similarity=0.742 Sum_probs=303.9
Q ss_pred eEEEeccccCcchhhhhhhcccccccchhhhhhccccccCCCCCC--CCcceEeceecCCceEEEEEEecCCCceEEEEE
Q 011141 30 LYRIGLKKRKFDLNNRVAARLDSKEGESFRTSIRKYSLRGNLGES--GDADIVALKNYMDAQYFGEIGIGTPPQNFTVIF 107 (492)
Q Consensus 30 ~~~ipL~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~--~~~~~~~l~~~~~~~Y~~~i~iGtP~Q~~~v~l 107 (492)
++||||+|.++.|+.+++.+..+++ |+ .|++++++++... .....+||.|+.|.+|+++|+||||||+|.|+|
T Consensus 1 ~~~ipl~~~~s~r~~~~~~~~~~~~---~~--~~~~~~~~~~~~~~~~~~~~~~l~n~~d~~Y~~~i~iGTPpQ~~~v~~ 75 (370)
T 3psg_A 1 LVKVPLVRKKSLRQNLIKDGKLKDF---LK--THKHNPASKYFPEAAALIGDEPLENYLDTEYFGTIGIGTPAQDFTVIF 75 (370)
T ss_dssp CEEEEEEECCCHHHHHHHTTCHHHH---HH--HCCCCGGGGTCTTSCCSSCCCTTGGGTTCCEEEEEEETTTTEEEEEEE
T ss_pred CEEEEeEEcCcHHHHHHhcCcHHHH---Hh--hhhcchhhhhccccccccceecceeccCCEEEEEEEEcCCCCEEEEEE
Confidence 4799999999999999988877664 32 3444443332111 135678999999999999999999999999999
Q ss_pred eCCCCCeeeeCCCCCCCccccCCCCCCCCCCCceeeCCceEEEEecCCeeEeeEEEeEEEECceeecccEEEEEEecCCc
Q 011141 108 DTGSSNLWVPSSKCYFSIACYFHSKYRSGRSSTYKKNGKSADIHYGTGAISGFFSEDHVKIGDLVVKDQEFIEATREPSL 187 (492)
Q Consensus 108 DTGSs~~WV~~~~C~~~~~C~~~~~y~~~~SsT~~~~~~~~~i~Yg~gs~~G~~~~D~v~~g~~~v~~~~fg~~~~~~~~ 187 (492)
||||+++||+|..|. ...|..|+.|+|++|+||+..++.|.+.|++|+++|.+++|+|++|+..++++.||++....+.
T Consensus 76 DTGSs~lWV~s~~C~-~~~C~~~~~y~~~~SsT~~~~~~~~~i~Yg~Gs~~G~~~~Dtv~ig~~~v~~~~Fg~a~~~~~~ 154 (370)
T 3psg_A 76 DTGSSNLWVPSVYCS-SLACSDHNQFNPDDSSTFEATSQELSITYGTGSMTGILGYDTVQVGGISDTNQIFGLSETEPGS 154 (370)
T ss_dssp ETTCCCEEEEBTTCC-SGGGTTSCCBCGGGCTTCEEEEEEEEEESSSCEEEEEEEEEEEEETTEEEEEEEEEEECSCCCG
T ss_pred eCCCCccEEECCCCC-CcccCCCCCCCCccCcCcEECCcEEEEEeCCceEEEEEEEEEEeeCCcccCCeEEEEEEeeccc
Confidence 999999999999996 6689999999999999999999999999999999999999999999999999999999987766
Q ss_pred cccccccceeecCCcccccCCCCCchHHHHHhcCCCCCCeEEEEecCCCCCCCCcEEEeCcccCCCCcccceEEeccCcc
Q 011141 188 TFLLAKFDGILGLGFQEISVGKAVPVWYNMVNQGLVNEPVFSFWFNRNADEEEGGEIVFGGMDPDHYKGEHTYVPVTQKG 267 (492)
Q Consensus 188 ~~~~~~~dGIlGLg~~~~s~~~~~~~~~~L~~qg~I~~~~FSl~l~~~~~~~~~G~L~fGgiD~~~~~g~l~~~p~~~~~ 267 (492)
.|....++||||||++..+.....|++++|++||+|++++||+||.+.. ..+|+|+|||+|+++|.|++.|+|+.+.+
T Consensus 155 ~~~~~~~dGIlGLg~~~~s~~~~~~~~~~l~~qg~i~~~~FS~~L~~~~--~~~G~l~fGg~D~~~y~g~l~~~pv~~~~ 232 (370)
T 3psg_A 155 FLYYAPFDGILGLAYPSISASGATPVFDNLWDQGLVSQDLFSVYLSSND--DSGSVVLLGGIDSSYYTGSLNWVPVSVEG 232 (370)
T ss_dssp GGGGCSCSEEEECSCGGGCGGGCCCHHHHHHHTTCSSSSEEEEEEC-------CEEEEETCCCGGGBSSCCEEEECSEET
T ss_pred ccccCCccceeccCCccccccCCCCHHHHHHHCCCCCCCEEEEEEccCC--CCCeEEEEEeeChHhcCCcceeecccccc
Confidence 6777789999999999998888899999999999999999999999862 23899999999999999999999999999
Q ss_pred ceEEEeceEEEcCccccccCCCceEEEcCCCCceeccHHHHHHHHHHhCCccccccccchhhcchhHHHHHHhhcccCcc
Q 011141 268 YWQFDMGDVMIDGQTTGFCAGGCAAIADSGTSLLAGPTTIITQVNHAIGATGIVSQECKAVVSQYGEEIINMLLAKDEPQ 347 (492)
Q Consensus 268 ~w~v~l~~i~vg~~~~~~~~~~~~aiiDTGtt~i~lP~~~~~~l~~~i~~~~~~~~~C~~~~~~y~~~~~~~~~~~~~~~ 347 (492)
+|.|.+++|+|+++.+. +..++.+++||||+++++|.+++++|.+++++.
T Consensus 233 ~w~v~l~~i~v~g~~~~-~~~~~~aiiDTGTs~~~lP~~~~~~i~~~i~a~----------------------------- 282 (370)
T 3psg_A 233 YWQITLDSITMDGETIA-CSGGCQAIVDTGTSLLTGPTSAIANIQSDIGAS----------------------------- 282 (370)
T ss_dssp TEEEEECEEESSSSEEE-CTTCEEEEECTTCCSEEEEHHHHHHHHHHTTCE-----------------------------
T ss_pred eeEEEEeEEEECCEEEe-cCCCceEEEcCCCCcEECCHHHHHHHHHHhCCc-----------------------------
Confidence 99999999999998764 567889999999999999999999999999876
Q ss_pred cccccccccccCCCCcccccccccccccCCCCCCCCCcccCchhHHHHHHHHHHHhhhchHHHHHHHHHhhcccCCCCCC
Q 011141 348 KICSQIGLCTFDGSRGVSMGIESVVPENNHRASGGFHDAMCSTCEMAVVWMQNQLKQNQTQERILNYVNELCDRLPSPMG 427 (492)
Q Consensus 348 ~~c~~~~~C~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~ 427 (492)
+...|
T Consensus 283 ---------------------------------------------------------------------------~~~~g 287 (370)
T 3psg_A 283 ---------------------------------------------------------------------------ENSDG 287 (370)
T ss_dssp ---------------------------------------------------------------------------ECTTC
T ss_pred ---------------------------------------------------------------------------ccCCC
Confidence 12367
Q ss_pred ceeeeCccCCCCCcEEEEECCEEEeeCcCcceEEeCcCCcceeeeceeecccCCCCCCeEEEcCC
Q 011141 428 ESAVDCSRLSSLPIVSFTIGGKIFDLTPDQYILKVGEGDAAQCISGFSALDVAPPRGPLWYVYSC 492 (492)
Q Consensus 428 ~~~~~c~~~~~~p~~~f~~~~~~~~l~~~~y~~~~~~~~~~~C~~~~~~~~~~~~~~~~~ilg~~ 492 (492)
.|.++|+...++|+|+|+|+|+.|+|++++|+++ .+ +.|+++|++.+.+++.++.|||||+
T Consensus 288 ~~~v~C~~~~~lP~i~f~~~g~~~~l~~~~yi~~-~~---~~C~~~~~~~~~~~~~~~~~ILG~~ 348 (370)
T 3psg_A 288 EMVISCSSIDSLPDIVFTIDGVQYPLSPSAYILQ-DD---DSCTSGFEGMDVPTSSGELWILGDV 348 (370)
T ss_dssp CEECCGGGGGGCCCEEEEETTEEEEECHHHHEEE-CS---SCEEESEEEECCCTTSCCEEEECHH
T ss_pred cEEEECCCcccCCcEEEEECCEEEEECHHHhccc-CC---CEEEEEEEeCCCCCCCCCcEEeChH
Confidence 7999999999999999999999999999999998 22 3699999998876666778999984
No 3
>2x0b_A Renin; hydrolase-hormone complex, hydrolase hormone complex, vasoconstrictor, glycoprotein, hypertension, serpins; 4.33A {Homo sapiens}
Probab=100.00 E-value=5.6e-64 Score=515.79 Aligned_cols=352 Identities=39% Similarity=0.753 Sum_probs=279.2
Q ss_pred CceEEEeccccCcchhhhhhhcc-cccccchhhhhhccccccCCCCCCCCcceEeceecCCceEEEEEEecCCCceEEEE
Q 011141 28 GGLYRIGLKKRKFDLNNRVAARL-DSKEGESFRTSIRKYSLRGNLGESGDADIVALKNYMDAQYFGEIGIGTPPQNFTVI 106 (492)
Q Consensus 28 ~~~~~ipL~~~~~~~~~~~~~~~-~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~Y~~~i~iGtP~Q~~~v~ 106 (492)
++++||||+|+++.|+.+++.+. .+++ ++ .+++... ..........+||.|+.+.+|+++|+||||||+|.|+
T Consensus 6 ~~~~~i~l~k~~~~~~~~~~~~~~~~~~---~~--~~~~~~~-~~~~~~~~~~~~l~n~~~~~Y~~~I~IGTP~Q~f~vi 79 (383)
T 2x0b_A 6 TTFKRIFLKRMPSIRESLKERGVDMARL---GP--EWSQPMK-RLTLGNTTSSVILTNYMDTQYYGEIGIGTPPQTFKVV 79 (383)
T ss_dssp ---------------------------------------------------CEEEEEEETTTEEEEEEEETTTTEEEEEE
T ss_pred CcEEEEEEEECCcHHHHHHHhCchHHHH---HH--hhccccc-cccccCCcceEeeeecCCCEEEEEEEECCCCcEEEEE
Confidence 35789999999998888877665 3332 11 1100000 0000123456899999999999999999999999999
Q ss_pred EeCCCCCeeeeCCCCCC-CccccCCCCCCCCCCCceeeCCceEEEEecCCeeEeeEEEeEEEECceeecccEEEEEEecC
Q 011141 107 FDTGSSNLWVPSSKCYF-SIACYFHSKYRSGRSSTYKKNGKSADIHYGTGAISGFFSEDHVKIGDLVVKDQEFIEATREP 185 (492)
Q Consensus 107 lDTGSs~~WV~~~~C~~-~~~C~~~~~y~~~~SsT~~~~~~~~~i~Yg~gs~~G~~~~D~v~~g~~~v~~~~fg~~~~~~ 185 (492)
|||||+++||+|..|.. ...|..|+.|||++|+||+..++.|.+.|++|+++|.+++|+|+||+..++ +.||++....
T Consensus 80 ~DTGSs~lWV~s~~C~~~~~~C~~~~~y~~~~SsT~~~~~~~~~i~Yg~Gs~~G~~~~Dtv~ig~~~v~-~~Fg~a~~~~ 158 (383)
T 2x0b_A 80 FDTGSSNVWVPSSKCSRLYTACVYHKLFDASDSSSYKHNGTELTLRYSTGTVSGFLSQDIITVGGITVT-QMFGEVTEMP 158 (383)
T ss_dssp EETTCCCEEEEBTTSCTTSHHHHTSCCBCGGGCTTCEEEEEEEEEECSSCEEEEEEEEEEEEETTEEEE-EEEEEEEECC
T ss_pred EeCCCCCeEEeccCCCCCcccccCCCCCCCCCCCcEEECCcEEEEEcCCccEEEEEEeeEEEEcCceEE-EEEEEEEecC
Confidence 99999999999999952 258999999999999999999999999999999999999999999999999 9999999876
Q ss_pred CccccccccceeecCCcccccCCCCCchHHHHHhcCCCCCCeEEEEecCCCCCC--CCcEEEeCcccCCCCcccceEEec
Q 011141 186 SLTFLLAKFDGILGLGFQEISVGKAVPVWYNMVNQGLVNEPVFSFWFNRNADEE--EGGEIVFGGMDPDHYKGEHTYVPV 263 (492)
Q Consensus 186 ~~~~~~~~~dGIlGLg~~~~s~~~~~~~~~~L~~qg~I~~~~FSl~l~~~~~~~--~~G~L~fGgiD~~~~~g~l~~~p~ 263 (492)
+..|....+|||||||++..+.....|++++|++||+|++++||+||++..+.. .+|+|+|||+|+++|.|++.|+|+
T Consensus 159 g~~f~~~~~dGIlGLg~~~~s~~~~~~~~~~l~~qg~i~~~~FS~~L~~~~~~~~~~~G~l~fGg~d~~~y~G~l~~~pv 238 (383)
T 2x0b_A 159 ALPFMLAEFDGVVGMGFIEQAIGRVTPIFDNIISQGVLKEDVFSFYYNRDSENSQSLGGQIVLGGSDPQHYEGNFHYINL 238 (383)
T ss_dssp HHHHTTCSSSEEEECSCGGGCGGGCCCHHHHHHTTTCCSSSEEEEEECCSCC----CCEEEEESSCCGGGEEEEEEEEEB
T ss_pred CcccccCCCceEeccCCCccccCCCCcHHHHHHhCCCCCCCEEEEEEcCCCCcccCCCcEEEECCcChHHcCCceEEEEc
Confidence 655666788999999999998888899999999999999999999999864321 379999999999999999999999
Q ss_pred cCccceEEEeceEEEcCccccccCCCceEEEcCCCCceeccHHHHHHHHHHhCCccccccccchhhcchhHHHHHHhhcc
Q 011141 264 TQKGYWQFDMGDVMIDGQTTGFCAGGCAAIADSGTSLLAGPTTIITQVNHAIGATGIVSQECKAVVSQYGEEIINMLLAK 343 (492)
Q Consensus 264 ~~~~~w~v~l~~i~vg~~~~~~~~~~~~aiiDTGtt~i~lP~~~~~~l~~~i~~~~~~~~~C~~~~~~y~~~~~~~~~~~ 343 (492)
.+.++|.|.+++|+|+++.+. +..++.+++||||+++++|.+++++|.+++++.
T Consensus 239 ~~~~~w~v~l~~i~v~~~~~~-~~~~~~aiiDTGTs~~~lP~~~~~~i~~~i~a~------------------------- 292 (383)
T 2x0b_A 239 IKTGVWQIQMKGVSVGSSTLL-CEDGCLALVDTGASYISGSTSSIEKLMEALGAK------------------------- 292 (383)
T ss_dssp SSTTSCEEEECEEEESSCCCB-STTCEEEEECTTCSSEEECHHHHHHHHHHHTCE-------------------------
T ss_pred CCCceEEEEEeEEEeCCceEE-cCCCcEEEEcCCCceEEcCHHHHHHHHHHhCCc-------------------------
Confidence 999999999999999998753 567889999999999999999999999999876
Q ss_pred cCcccccccccccccCCCCcccccccccccccCCCCCCCCCcccCchhHHHHHHHHHHHhhhchHHHHHHHHHhhcccCC
Q 011141 344 DEPQKICSQIGLCTFDGSRGVSMGIESVVPENNHRASGGFHDAMCSTCEMAVVWMQNQLKQNQTQERILNYVNELCDRLP 423 (492)
Q Consensus 344 ~~~~~~c~~~~~C~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~c~~~~ 423 (492)
+
T Consensus 293 -------------------------------------------------------------------------------~ 293 (383)
T 2x0b_A 293 -------------------------------------------------------------------------------K 293 (383)
T ss_dssp -------------------------------------------------------------------------------E
T ss_pred -------------------------------------------------------------------------------c
Confidence 1
Q ss_pred CCCCceeeeCccCCCCCcEEEEECCEEEeeCcCcceEEeCcCCcceeeeceeecccCCCCCCeEEEcCC
Q 011141 424 SPMGESAVDCSRLSSLPIVSFTIGGKIFDLTPDQYILKVGEGDAAQCISGFSALDVAPPRGPLWYVYSC 492 (492)
Q Consensus 424 ~~~~~~~~~c~~~~~~p~~~f~~~~~~~~l~~~~y~~~~~~~~~~~C~~~~~~~~~~~~~~~~~ilg~~ 492 (492)
..|.|.++|+.++.+|+|+|+|+|+.|+|+|++|+++..+.+...|+++|++.+.+++.++.|||||+
T Consensus 294 -~~g~~~v~C~~~~~~P~i~f~~~g~~~~l~~~~yi~~~~~~~~~~C~~~~~~~~~~~~~~~~~ILGd~ 361 (383)
T 2x0b_A 294 -RLFDYVVKCNEGPTLPDISFHLGGKEYTLTSADYVFQESYSSKKLCTLAIHAMDIPPPTGPTWALGAT 361 (383)
T ss_dssp -CSSCEEEEGGGTTTCCCEEEEETTEEEEECHHHHBCCCCCCTTSEEEBSEEECCCCTTTCSCEEECHH
T ss_pred -cCCcEEEeccccccCceEEEEECCEEEEECHHHhEeeccCCCCCeEEEEEEecccCCCCCCcEEEChH
Confidence 25679999999999999999999999999999999987654456899999999877667789999984
No 4
>1tzs_A Cathepsin E; hydrolase, aspartic protease, activation intermediate; 2.35A {Homo sapiens}
Probab=100.00 E-value=8.9e-58 Score=465.65 Aligned_cols=310 Identities=46% Similarity=0.866 Sum_probs=273.2
Q ss_pred CcceEeceecCCceEEEEEEecCCCceEEEEEeCCCCCeeeeCCCCCCCccccCCCCCCCCCCCceeeCCceEEEEecCC
Q 011141 76 DADIVALKNYMDAQYFGEIGIGTPPQNFTVIFDTGSSNLWVPSSKCYFSIACYFHSKYRSGRSSTYKKNGKSADIHYGTG 155 (492)
Q Consensus 76 ~~~~~~l~~~~~~~Y~~~i~iGtP~Q~~~v~lDTGSs~~WV~~~~C~~~~~C~~~~~y~~~~SsT~~~~~~~~~i~Yg~g 155 (492)
+...+||.|+.+.+|+++|.||||+|++.|+|||||+++||++..|. ...|..++.|+|++|+||+..++.|.+.|++|
T Consensus 11 ~~~~~~l~n~~~~~Y~~~i~iGtP~Q~~~v~~DTGSs~lWv~~~~C~-~~~C~~~~~y~~~~SsT~~~~~~~~~i~Yg~G 89 (351)
T 1tzs_A 11 QSAKEPLINYLDMEYFGTISIGSPPQNFTVIFDTGSSNLWVPSVYCT-SPACKTHSRFQPSQSSTYSQPGQSFSIQYGTG 89 (351)
T ss_dssp ---CCTTGGGSSSCCCEEEEETTTTEEEEEEEETTCCCEEEEBTTCC-SGGGTTSCCBCGGGCTTCBCCSCEEEEESSSC
T ss_pred CccceeceecCCCEEEEEEEECCCCeEEEEEEeCCCcceEEecCCCC-ccccCCCCcCCcccCcceEECCCEEEEEeCCC
Confidence 34458999999999999999999999999999999999999999996 46899999999999999999999999999999
Q ss_pred eeEeeEEEeEEEECceeecccEEEEEEecCCccccccccceeecCCcccccCCCCCchHHHHHhcCCCCCCeEEEEecCC
Q 011141 156 AISGFFSEDHVKIGDLVVKDQEFIEATREPSLTFLLAKFDGILGLGFQEISVGKAVPVWYNMVNQGLVNEPVFSFWFNRN 235 (492)
Q Consensus 156 s~~G~~~~D~v~~g~~~v~~~~fg~~~~~~~~~~~~~~~dGIlGLg~~~~s~~~~~~~~~~L~~qg~I~~~~FSl~l~~~ 235 (492)
+++|.+++|+|+||+..++++.||++....+..|....++||||||++..+.....+++++|++||+|++++||+||.+.
T Consensus 90 s~~G~~~~D~v~ig~~~~~~~~fg~~~~~~~~~~~~~~~~GilGLg~~~~s~~~~~~~~~~l~~qg~i~~~~FS~~L~~~ 169 (351)
T 1tzs_A 90 SLSGIIGADQVSVEGLTVVGQQFGESVTEPGQTFVDAEFDGILGLGYPSLAVGGVTPVFDNMMAQNLVDLPMFSVYMSSN 169 (351)
T ss_dssp EEEEEEEEEEEEETTEEEEEEEEEEECSCCCGGGGGCSCSEEEECSCGGGSGGGCCCHHHHHHHTTCCSSSEEEEECCCC
T ss_pred CeEEEEEEeEEEECCeEECCeEEEEEEeccccccccCCCceEEecCCccccccCCCcHHHHHHHCCCCCCCEEEEEEcCC
Confidence 99999999999999999999999999877665566678899999999988877788999999999999999999999987
Q ss_pred CCCCCCcEEEeCcccCCCCcccceEEeccCccceEEEeceEEEcCccccccCCCceEEEcCCCCceeccHHHHHHHHHHh
Q 011141 236 ADEEEGGEIVFGGMDPDHYKGEHTYVPVTQKGYWQFDMGDVMIDGQTTGFCAGGCAAIADSGTSLLAGPTTIITQVNHAI 315 (492)
Q Consensus 236 ~~~~~~G~L~fGgiD~~~~~g~l~~~p~~~~~~w~v~l~~i~vg~~~~~~~~~~~~aiiDTGtt~i~lP~~~~~~l~~~i 315 (492)
.+....|+|+|||+|+++|.|++.|+|+...++|.|.+++|+|+++.+. +..+..++|||||+++++|.+++++|.+++
T Consensus 170 ~~~~~~G~l~fGg~d~~~~~g~l~~~p~~~~~~~~v~l~~i~v~~~~~~-~~~~~~aiiDSGTs~~~lP~~~~~~l~~~~ 248 (351)
T 1tzs_A 170 PEGGAGSELIFGGYDHSHFSGSLNWVPVTKQAYWQIALDNIQVGGTVMF-CSEGCQAIVDTGTSLITGPSDKIKQLQNAI 248 (351)
T ss_dssp C--CTTCEEEETSCCGGGBCSCCEEEECSEETTEEEEEEEEEETTEEEE-CTTCEEEEECTTCSSEEECHHHHHHHHHHH
T ss_pred CCCCCCCEEEECCCCHHHcCCceEEEecCCCceEEEEeCEEEECCceEE-cCCCceEEeccCCcceeCCHHHHHHHHHHh
Confidence 4333479999999999999999999999999999999999999998753 456788999999999999999999999999
Q ss_pred CCccccccccchhhcchhHHHHHHhhcccCcccccccccccccCCCCcccccccccccccCCCCCCCCCcccCchhHHHH
Q 011141 316 GATGIVSQECKAVVSQYGEEIINMLLAKDEPQKICSQIGLCTFDGSRGVSMGIESVVPENNHRASGGFHDAMCSTCEMAV 395 (492)
Q Consensus 316 ~~~~~~~~~C~~~~~~y~~~~~~~~~~~~~~~~~c~~~~~C~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~c~~~~~~~ 395 (492)
++..
T Consensus 249 ~~~~---------------------------------------------------------------------------- 252 (351)
T 1tzs_A 249 GAAP---------------------------------------------------------------------------- 252 (351)
T ss_dssp TCEE----------------------------------------------------------------------------
T ss_pred CCcc----------------------------------------------------------------------------
Confidence 7651
Q ss_pred HHHHHHHhhhchHHHHHHHHHhhcccCCCCCCceeeeCccCCCCCcEEEEECCEEEeeCcCcceEEeCcCCcceeeecee
Q 011141 396 VWMQNQLKQNQTQERILNYVNELCDRLPSPMGESAVDCSRLSSLPIVSFTIGGKIFDLTPDQYILKVGEGDAAQCISGFS 475 (492)
Q Consensus 396 ~~~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~c~~~~~~p~~~f~~~~~~~~l~~~~y~~~~~~~~~~~C~~~~~ 475 (492)
.. +.|.++|+....+|+|+|+|+|+.|+|+|++|+++..+.+...|+++|+
T Consensus 253 ----------------------------~~-g~~~~~C~~~~~~P~i~f~f~g~~~~i~~~~yi~~~~~~~~~~C~~~~~ 303 (351)
T 1tzs_A 253 ----------------------------VD-GEYAVECANLNVMPDVTFTINGVPYTLSPTAYTLLDFVDGMQFCSSGFQ 303 (351)
T ss_dssp ----------------------------CS-SSEEECGGGGGGSCCEEEEETTEEEEECTTTSEECC-----CCEEESEE
T ss_pred ----------------------------cC-CeEEEeCCCCccCCcEEEEECCEEEEECHHHhEeeccCCCCCeEEEEEE
Confidence 12 6789999998889999999999999999999999865433457999999
Q ss_pred ecccCCCCCCeEEEcCC
Q 011141 476 ALDVAPPRGPLWYVYSC 492 (492)
Q Consensus 476 ~~~~~~~~~~~~ilg~~ 492 (492)
+.+.+.+.++.||||++
T Consensus 304 ~~~~~~~~~~~~iLG~~ 320 (351)
T 1tzs_A 304 GLDIHPPAGPLWILGDV 320 (351)
T ss_dssp ECCCCTTTCSCEEECHH
T ss_pred ECCCCCCCCCeEEEChH
Confidence 98765555678999973
No 5
>1dpj_A Proteinase A; proteinase A, hydrolase-hydrolase inhibitor COM; HET: BMA MAN NAG; 1.80A {Saccharomyces cerevisiae} SCOP: b.50.1.2 PDB: 1dp5_A* 1fmu_A* 1fmx_A* 1fq5_A* 1fq4_A* 1fq6_A* 1fq7_A* 1fq8_A* 2jxr_A* 1g0v_A*
Probab=100.00 E-value=6.5e-57 Score=455.36 Aligned_cols=304 Identities=44% Similarity=0.829 Sum_probs=272.3
Q ss_pred ceEeceecCCceEEEEEEecCCCceEEEEEeCCCCCeeeeCCCCCCCccccCCCCCCCCCCCceeeCCceEEEEecCCee
Q 011141 78 DIVALKNYMDAQYFGEIGIGTPPQNFTVIFDTGSSNLWVPSSKCYFSIACYFHSKYRSGRSSTYKKNGKSADIHYGTGAI 157 (492)
Q Consensus 78 ~~~~l~~~~~~~Y~~~i~iGtP~Q~~~v~lDTGSs~~WV~~~~C~~~~~C~~~~~y~~~~SsT~~~~~~~~~i~Yg~gs~ 157 (492)
..+||.|+.+.+|+++|.||||||++.|+|||||+++||+|..|. ...|..++.|||++|+||+..++.|.+.|++|++
T Consensus 3 ~~~~l~~~~~~~Y~~~i~iGtP~q~~~v~~DTGSs~lWv~~~~C~-~~~C~~~~~y~~~~SsT~~~~~~~~~i~Yg~Gs~ 81 (329)
T 1dpj_A 3 HDVPLTNYLNAQYYTDITLGTPPQNFKVILDTGSSNLWVPSNECG-SLACFLHSKYDHEASSSYKANGTEFAIQYGTGSL 81 (329)
T ss_dssp EEEECEEETTTEEEEEEEETTTTEEEEEEEETTCCCEEEEBTTCC-SHHHHTSCCBCGGGCTTCEEEEEEEEEEETTEEE
T ss_pred cceeeeecCCCEEEEEEEECCCCcEEEEEEeCCCcCeEEecCCCC-CcccCCcCcCCcccCcCeEECCcEEEEEECCceE
Confidence 458999999999999999999999999999999999999999996 4579989999999999999999999999999999
Q ss_pred EeeEEEeEEEECceeecccEEEEEEecCCccccccccceeecCCcccccCCCCCchHHHHHhcCCCCCCeEEEEecCCCC
Q 011141 158 SGFFSEDHVKIGDLVVKDQEFIEATREPSLTFLLAKFDGILGLGFQEISVGKAVPVWYNMVNQGLVNEPVFSFWFNRNAD 237 (492)
Q Consensus 158 ~G~~~~D~v~~g~~~v~~~~fg~~~~~~~~~~~~~~~dGIlGLg~~~~s~~~~~~~~~~L~~qg~I~~~~FSl~l~~~~~ 237 (492)
+|.+++|+|+||+.+++++.||++....+..|....++||||||++..+.....+++++|++||+|++++||+||.+...
T Consensus 82 ~G~~~~D~v~ig~~~~~~~~fg~~~~~~~~~f~~~~~~GilGLg~~~~s~~~~~~~~~~l~~qg~i~~~~Fs~~l~~~~~ 161 (329)
T 1dpj_A 82 EGYISQDTLSIGDLTIPKQDFAEATSEPGLTFAFGKFDGILGLGYDTISVDKVVPPFYNAIQQDLLDEKRFAFYLGDTSK 161 (329)
T ss_dssp EEEEEEEEEEETTEEEEEEEEEEEEECCHHHHTTCSCSEEEECSCGGGCGGGCCCHHHHHHHTTCCSSSEEEEEECCGGG
T ss_pred EEEEEEEEEEECCeEECCeEEEEEEecCccccccCCcceEEEeCCchhhccCCCCHHHHHHhcCCcCCCEEEEEecCCCC
Confidence 99999999999999999999999998665345556789999999998887778889999999999999999999987532
Q ss_pred -CCCCcEEEeCcccCCCCcccceEEeccCccceEEEeceEEEcCccccccCCCceEEEcCCCCceeccHHHHHHHHHHhC
Q 011141 238 -EEEGGEIVFGGMDPDHYKGEHTYVPVTQKGYWQFDMGDVMIDGQTTGFCAGGCAAIADSGTSLLAGPTTIITQVNHAIG 316 (492)
Q Consensus 238 -~~~~G~L~fGgiD~~~~~g~l~~~p~~~~~~w~v~l~~i~vg~~~~~~~~~~~~aiiDTGtt~i~lP~~~~~~l~~~i~ 316 (492)
....|+|+|||+|+++|.|++.|+|+.++++|.|.+++|+|+++.+. ..+..++|||||+++++|.+++++|+++++
T Consensus 162 ~~~~~G~l~fGg~d~~~~~g~l~~~p~~~~~~~~v~l~~i~v~~~~~~--~~~~~aiiDSGTt~~~lP~~~~~~l~~~~~ 239 (329)
T 1dpj_A 162 DTENGGEATFGGIDESKFKGDITWLPVRRKAYWEVKFEGIGLGDEYAE--LESHGAAIDTGTSLITLPSGLAEMINAEIG 239 (329)
T ss_dssp TCSSSEEEEESSCCGGGEEEEEEEEECSSBTTBEEEEEEEEETTEEEE--CSSCEEEECTTCSCEEECHHHHHHHHHHHT
T ss_pred CCCCCcEEEEcCCChhhcCCceEEEEcCCCceEEEEeeeEEECCeEec--CCCccEEeeCCCCcEECCHHHHHHHHHHhC
Confidence 22479999999999999999999999999999999999999998764 356789999999999999999999999997
Q ss_pred CccccccccchhhcchhHHHHHHhhcccCcccccccccccccCCCCcccccccccccccCCCCCCCCCcccCchhHHHHH
Q 011141 317 ATGIVSQECKAVVSQYGEEIINMLLAKDEPQKICSQIGLCTFDGSRGVSMGIESVVPENNHRASGGFHDAMCSTCEMAVV 396 (492)
Q Consensus 317 ~~~~~~~~C~~~~~~y~~~~~~~~~~~~~~~~~c~~~~~C~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~ 396 (492)
+..
T Consensus 240 ~~~----------------------------------------------------------------------------- 242 (329)
T 1dpj_A 240 AKK----------------------------------------------------------------------------- 242 (329)
T ss_dssp CEE-----------------------------------------------------------------------------
T ss_pred Ccc-----------------------------------------------------------------------------
Confidence 651
Q ss_pred HHHHHHhhhchHHHHHHHHHhhcccCCCCCCceeeeCccCCCCCcEEEEECCEEEeeCcCcceEEeCcCCcceeeeceee
Q 011141 397 WMQNQLKQNQTQERILNYVNELCDRLPSPMGESAVDCSRLSSLPIVSFTIGGKIFDLTPDQYILKVGEGDAAQCISGFSA 476 (492)
Q Consensus 397 ~~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~c~~~~~~p~~~f~~~~~~~~l~~~~y~~~~~~~~~~~C~~~~~~ 476 (492)
...+.|.++|+....+|+|+|+|+|+.++|+|++|+++.+ ..|+++|++
T Consensus 243 ---------------------------~~~g~~~~~C~~~~~~P~i~f~f~g~~~~i~~~~y~~~~~----~~C~~~~~~ 291 (329)
T 1dpj_A 243 ---------------------------GWTGQYTLDCNTRDNLPDLIFNFNGYNFTIGPYDYTLEVS----GSCISAITP 291 (329)
T ss_dssp ---------------------------CTTSSEEECGGGGGGCCCEEEEETTEEEEECTTTSEEEET----TEEEECEEE
T ss_pred ---------------------------CCCCeEEEECCCCCcCCcEEEEECCEEEEECHHHhEecCC----CEEEEEEEe
Confidence 2356799999998899999999999999999999999864 479999999
Q ss_pred cccCCCCCCeEEEcCC
Q 011141 477 LDVAPPRGPLWYVYSC 492 (492)
Q Consensus 477 ~~~~~~~~~~~ilg~~ 492 (492)
.+.+.+.++.||||++
T Consensus 292 ~~~~~~~~~~~iLG~~ 307 (329)
T 1dpj_A 292 MDFPEPVGPLAIVGDA 307 (329)
T ss_dssp CCCCTTTCSEEEECHH
T ss_pred cccCCCCCCcEEEChH
Confidence 8765556689999973
No 6
>3cms_A Chymosin B; hydrolase, acid proteinase; 2.00A {Bos taurus} SCOP: b.50.1.2 PDB: 4cms_A 1czi_E* 1cms_A
Probab=100.00 E-value=5.3e-57 Score=454.86 Aligned_cols=299 Identities=43% Similarity=0.806 Sum_probs=268.7
Q ss_pred cceEeceecCCceEEEEEEecCCCceEEEEEeCCCCCeeeeCCCCCCCccccCCCCCCCCCCCceeeCCceEEEEecCCe
Q 011141 77 ADIVALKNYMDAQYFGEIGIGTPPQNFTVIFDTGSSNLWVPSSKCYFSIACYFHSKYRSGRSSTYKKNGKSADIHYGTGA 156 (492)
Q Consensus 77 ~~~~~l~~~~~~~Y~~~i~iGtP~Q~~~v~lDTGSs~~WV~~~~C~~~~~C~~~~~y~~~~SsT~~~~~~~~~i~Yg~gs 156 (492)
...+||.|+.+.+|+++|.||||||++.|++||||+++||+|..|. ...|..++.|||++|+||+..++.|.+.|++|+
T Consensus 3 ~~~~~l~n~~~~~Y~~~i~iGtP~q~~~v~~DTGSs~~Wv~~~~C~-~~~C~~~~~y~~~~SsT~~~~~~~~~i~Yg~Gs 81 (323)
T 3cms_A 3 VASVPLTNYLDSQYFGKIYLGTPPQEFTVLFDTGSSDFWVPSIYCK-SNACKNHQRFDPRKSSTFQNLGKPLSIHYGTGS 81 (323)
T ss_dssp CEEEEEEEETTTEEEEEEEETTTTEEEEEEEETTCCCEEEEBTTCC-SHHHHTSCCBCGGGCTTCEEEEEEEEEEETTEE
T ss_pred cceeeeEeccCCEEEEEEEECCCCeEEEEEEeCCccceEEcCCCCC-cccccCCCCCCCccCCCeEECCcEEEEEeCCCC
Confidence 4568999999999999999999999999999999999999999995 568999999999999999999999999999999
Q ss_pred eEeeEEEeEEEECceeecccEEEEEEecCCccccccccceeecCCcccccCCCCCchHHHHHhcCCCCCCeEEEEecCCC
Q 011141 157 ISGFFSEDHVKIGDLVVKDQEFIEATREPSLTFLLAKFDGILGLGFQEISVGKAVPVWYNMVNQGLVNEPVFSFWFNRNA 236 (492)
Q Consensus 157 ~~G~~~~D~v~~g~~~v~~~~fg~~~~~~~~~~~~~~~dGIlGLg~~~~s~~~~~~~~~~L~~qg~I~~~~FSl~l~~~~ 236 (492)
++|.+++|+|++|+.+++++.||++....+..|....++||||||++..+.....+++++|++||.|++++||+||.+..
T Consensus 82 ~~G~~~~D~v~ig~~~~~~~~fg~~~~~~~~~~~~~~~~GilGLg~~~~s~~~~~~~~~~l~~q~~i~~~~FS~~l~~~~ 161 (323)
T 3cms_A 82 MQGILGYDTVTVSNIVDIQQTVGLSTQEPGDFFTYAEFDGILGMAYPSLASEYSIPVFDNMMNRHLVAQDLFSVYMDRNG 161 (323)
T ss_dssp EEEEEEEEEEEETTEEEEEEEEEEEEECCSHHHHHSSCSEEEECSCGGGSCTTCCCHHHHHHHTTCSSSSEEEEECCTTS
T ss_pred eEEEEEEEEEEECCeEEeccEEEEEEecccccccccCCceEEecCcchhhccCCCCHHHHHHHCCCCCCCEEEEEECCCC
Confidence 99999999999999999999999999876544555678999999999988878889999999999999999999998863
Q ss_pred CCCCCcEEEeCcccCCCCcccceEEeccCccceEEEeceEEEcCccccccCCCceEEEcCCCCceeccHHHHHHHHHHhC
Q 011141 237 DEEEGGEIVFGGMDPDHYKGEHTYVPVTQKGYWQFDMGDVMIDGQTTGFCAGGCAAIADSGTSLLAGPTTIITQVNHAIG 316 (492)
Q Consensus 237 ~~~~~G~L~fGgiD~~~~~g~l~~~p~~~~~~w~v~l~~i~vg~~~~~~~~~~~~aiiDTGtt~i~lP~~~~~~l~~~i~ 316 (492)
. .|+|+|||+|+++|.|++.|+|+.+.++|.|.+++|+|+++.+. +..+..++|||||+++++|.+++++|.++++
T Consensus 162 ~---~G~l~fGg~d~~~~~g~l~~~p~~~~~~~~v~l~~i~v~~~~~~-~~~~~~aiiDSGTt~~~lP~~~~~~l~~~~~ 237 (323)
T 3cms_A 162 Q---ESMLTLGAIDPSYYTGSLHWVPVTVQQYWQFTVDSVTISGVVVA-CEGGCQAILDTGTSKLVGPSSDILNIQQAIG 237 (323)
T ss_dssp S---CEEEEESCCCGGGEEEEEEEEECSSBTTBEEEEEEEEETTEEEE-STTCEEEEECTTCCSEEECHHHHHHHHHHHT
T ss_pred C---CEEEEECCCChhhccCceEEEECccCCeEEEEEeeEEECCEEee-cCCCcEEEEecCCccEeCCHHHHHHHHHHhC
Confidence 3 49999999999999999999999999999999999999998764 3467889999999999999999999999997
Q ss_pred CccccccccchhhcchhHHHHHHhhcccCcccccccccccccCCCCcccccccccccccCCCCCCCCCcccCchhHHHHH
Q 011141 317 ATGIVSQECKAVVSQYGEEIINMLLAKDEPQKICSQIGLCTFDGSRGVSMGIESVVPENNHRASGGFHDAMCSTCEMAVV 396 (492)
Q Consensus 317 ~~~~~~~~C~~~~~~y~~~~~~~~~~~~~~~~~c~~~~~C~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~ 396 (492)
+..
T Consensus 238 ~~~----------------------------------------------------------------------------- 240 (323)
T 3cms_A 238 ATQ----------------------------------------------------------------------------- 240 (323)
T ss_dssp CEE-----------------------------------------------------------------------------
T ss_pred Cee-----------------------------------------------------------------------------
Confidence 651
Q ss_pred HHHHHHhhhchHHHHHHHHHhhcccCCCCCCceeeeCccCCCCCcEEEEECCEEEeeCcCcceEEeCcCCcceeeeceee
Q 011141 397 WMQNQLKQNQTQERILNYVNELCDRLPSPMGESAVDCSRLSSLPIVSFTIGGKIFDLTPDQYILKVGEGDAAQCISGFSA 476 (492)
Q Consensus 397 ~~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~c~~~~~~p~~~f~~~~~~~~l~~~~y~~~~~~~~~~~C~~~~~~ 476 (492)
...+.|.++|+..+.+|+|+|+|+|+.|+|+|++|+++ +...|+++|++
T Consensus 241 ---------------------------~~~g~~~~~C~~~~~~P~i~f~f~g~~~~i~~~~y~~~----~~~~C~~~i~~ 289 (323)
T 3cms_A 241 ---------------------------NQYGEFDIDCDNLSYMPTVVFEINGKMYPLTPSAYTSQ----DQGFCTSGFQS 289 (323)
T ss_dssp ---------------------------ETTTEEEECTTCTTTSCCEEEEETTEEEEECHHHHEEE----ETTEEEESEEE
T ss_pred ---------------------------cCCCcEEEECCCCccCceEEEEECCEEEEECHHHhccC----CCCEEEEEEEe
Confidence 12467899999988999999999999999999999998 23579999988
Q ss_pred cccCCCCCCeEEEcCC
Q 011141 477 LDVAPPRGPLWYVYSC 492 (492)
Q Consensus 477 ~~~~~~~~~~~ilg~~ 492 (492)
.+ .++.||||++
T Consensus 290 ~~----~~~~~iLG~~ 301 (323)
T 3cms_A 290 EN----HSQKWILGDV 301 (323)
T ss_dssp C-------CCEEECHH
T ss_pred CC----CCCcEEECHH
Confidence 75 3468999974
No 7
>3k1w_A Renin; protease, alternative splicing, aspartyl protease, cleavage on PAIR of basic residues, disease mutation, disulfide bond, glycoprotein; HET: BFX NDG HSQ; 1.50A {Homo sapiens} SCOP: b.50.1.2 PDB: 3d91_A* 3g70_A* 3g6z_A* 3own_A* 2iko_A* 1bbs_A* 1rne_A* 2bkt_A* 2bks_A* 2iku_A* 2il2_A* 2ren_A* 2v0z_C* 2v10_C* 2v11_C* 2v12_C* 2v13_A* 2v16_C* 3g72_A* 3oot_A* ...
Probab=100.00 E-value=5.5e-57 Score=458.02 Aligned_cols=310 Identities=43% Similarity=0.861 Sum_probs=276.7
Q ss_pred CcceEeceecCCceEEEEEEecCCCceEEEEEeCCCCCeeeeCCCCCC-CccccCCCCCCCCCCCceeeCCceEEEEecC
Q 011141 76 DADIVALKNYMDAQYFGEIGIGTPPQNFTVIFDTGSSNLWVPSSKCYF-SIACYFHSKYRSGRSSTYKKNGKSADIHYGT 154 (492)
Q Consensus 76 ~~~~~~l~~~~~~~Y~~~i~iGtP~Q~~~v~lDTGSs~~WV~~~~C~~-~~~C~~~~~y~~~~SsT~~~~~~~~~i~Yg~ 154 (492)
+...+||.|+.|.+|+++|.||||||+++|++||||+++||++..|.. ...|..++.|+|++|+||+..++.|.+.|++
T Consensus 6 ~~~~~~l~n~~d~~Y~~~i~iGtP~q~~~v~~DTGSs~~Wv~~~~C~~~~~~C~~~~~y~~~~SsT~~~~~~~~~i~Yg~ 85 (341)
T 3k1w_A 6 TTSSVILTNYMDTQYYGEIGIGTPPQTFKVVFDTGSSNVWVPSSKCSRLYTACVYHKLFDASDSSSYKHNGTELTLRYST 85 (341)
T ss_dssp BCEEEEEEEETTTEEEEEEEETTTTEEEEEEEETTCCCEEEEBTTSCTTCHHHHTSCCBCGGGCTTCEEEEEEEEEEETT
T ss_pred CCccccceEccCCEEEEEEEEcCCCcEEEEEEeCCCcceEEccCCCCCCCCcccCCCCCCCCcCcCeeECCCEEEEEECC
Confidence 566799999999999999999999999999999999999999999952 3479989999999999999999999999999
Q ss_pred CeeEeeEEEeEEEECceeecccEEEEEEecCCccccccccceeecCCcccccCCCCCchHHHHHhcCCCCCCeEEEEecC
Q 011141 155 GAISGFFSEDHVKIGDLVVKDQEFIEATREPSLTFLLAKFDGILGLGFQEISVGKAVPVWYNMVNQGLVNEPVFSFWFNR 234 (492)
Q Consensus 155 gs~~G~~~~D~v~~g~~~v~~~~fg~~~~~~~~~~~~~~~dGIlGLg~~~~s~~~~~~~~~~L~~qg~I~~~~FSl~l~~ 234 (492)
|+++|.+++|+|+||+..+ ++.||++....+..+....++||||||++..+.....|++++|++||+|++++||+||.+
T Consensus 86 gs~~G~~~~D~v~ig~~~v-~~~fg~~~~~~~~~~~~~~~~GilGLg~~~~s~~~~~~~~~~l~~qg~i~~~~Fs~~l~~ 164 (341)
T 3k1w_A 86 GTVSGFLSQDIITVGGITV-TQMFGEVTEMPALPFMLAEFDGVVGMGFIEQAIGRVTPIFDNIISQGVLKEDVFSFYYNR 164 (341)
T ss_dssp EEEEEEEEEEEEEETTEEE-EEEEEEEEECCHHHHTTCSSSEEEECSCGGGCGGGCCCHHHHHHHHTCBSSSEEEEEECC
T ss_pred cEEEEEEEEEEEEECCcee-eEEEEEEEEccccccccCCcceEEECCchhhcccCCCCHHHHHHHCCCCCCCEEEEEEeC
Confidence 9999999999999999999 999999998765445666789999999999887788899999999999999999999998
Q ss_pred CC--CCCCCcEEEeCcccCCCCcccceEEeccCccceEEEeceEEEcCccccccCCCceEEEcCCCCceeccHHHHHHHH
Q 011141 235 NA--DEEEGGEIVFGGMDPDHYKGEHTYVPVTQKGYWQFDMGDVMIDGQTTGFCAGGCAAIADSGTSLLAGPTTIITQVN 312 (492)
Q Consensus 235 ~~--~~~~~G~L~fGgiD~~~~~g~l~~~p~~~~~~w~v~l~~i~vg~~~~~~~~~~~~aiiDTGtt~i~lP~~~~~~l~ 312 (492)
.. +....|+|+|||+|+++|.|++.|+|+.+.++|.|.+++|+|++..+. +..+..++|||||+++++|.+++++|+
T Consensus 165 ~~~~~~~~~G~l~fGg~d~~~~~g~l~~~p~~~~~~w~v~l~~i~v~~~~~~-~~~~~~~iiDsGtt~~~lP~~~~~~i~ 243 (341)
T 3k1w_A 165 DSENSQSLGGQIVLGGSDPQHYEGNFHYINLIKTGVWQIQMKGVSVGSSTLL-CEDGCLALVDTGASYISGSTSSIEKLM 243 (341)
T ss_dssp CC-----CCEEEEESSCCGGGEEEEEEEEECSSTTSCEEEECCEEETTEEEE-CTTCEEEEECTTCSSEEECHHHHHHHH
T ss_pred CCCcCCCCCCEEEECccChHHccCceEEEecCCCCEEEEEEeEEEECCEEee-cCCCCEEEEECCCChhcCCHHHHHHHH
Confidence 64 223479999999999999999999999999999999999999998653 456789999999999999999999999
Q ss_pred HHhCCccccccccchhhcchhHHHHHHhhcccCcccccccccccccCCCCcccccccccccccCCCCCCCCCcccCchhH
Q 011141 313 HAIGATGIVSQECKAVVSQYGEEIINMLLAKDEPQKICSQIGLCTFDGSRGVSMGIESVVPENNHRASGGFHDAMCSTCE 392 (492)
Q Consensus 313 ~~i~~~~~~~~~C~~~~~~y~~~~~~~~~~~~~~~~~c~~~~~C~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~c~~~~ 392 (492)
+++++..
T Consensus 244 ~~~~~~~------------------------------------------------------------------------- 250 (341)
T 3k1w_A 244 EALGAKK------------------------------------------------------------------------- 250 (341)
T ss_dssp HHHTCEE-------------------------------------------------------------------------
T ss_pred HHcCCee-------------------------------------------------------------------------
Confidence 9997761
Q ss_pred HHHHHHHHHHhhhchHHHHHHHHHhhcccCCCCCCceeeeCccCCCCCcEEEEECCEEEeeCcCcceEEeCcCCcceeee
Q 011141 393 MAVVWMQNQLKQNQTQERILNYVNELCDRLPSPMGESAVDCSRLSSLPIVSFTIGGKIFDLTPDQYILKVGEGDAAQCIS 472 (492)
Q Consensus 393 ~~~~~~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~c~~~~~~p~~~f~~~~~~~~l~~~~y~~~~~~~~~~~C~~ 472 (492)
...| |.++|+....+|+|+|+|+|+.++|+|++|+++....+...|++
T Consensus 251 -------------------------------~~~g-~~~~C~~~~~~p~i~f~f~g~~~~l~~~~~~~~~~~~~~~~C~~ 298 (341)
T 3k1w_A 251 -------------------------------RLFD-YVVKCNEGPTLPDISFHLGGKEYTLTSADYVFQESYSSKKLCTL 298 (341)
T ss_dssp -------------------------------CSSC-EEEEGGGGGGCCCEEEEETTEEEEECHHHHBCCSCCCTTSEEEB
T ss_pred -------------------------------cCCC-eEEeCCCCCcCCcEEEEECCEEEEECHHHheeEccCCCCCeEEe
Confidence 1245 99999998899999999999999999999999865544578999
Q ss_pred ceeecccCCCCCCeEEEcCC
Q 011141 473 GFSALDVAPPRGPLWYVYSC 492 (492)
Q Consensus 473 ~~~~~~~~~~~~~~~ilg~~ 492 (492)
+|+..+.+...++.||||++
T Consensus 299 ~i~~~~~~~~~~~~~iLG~~ 318 (341)
T 3k1w_A 299 AIHAMDIPPPTGPTWALGAT 318 (341)
T ss_dssp SEEECCCCTTTCSCEEECHH
T ss_pred EEEecccCCCCCCeEEEChH
Confidence 99998866556789999973
No 8
>4aa9_A Chymosin; hydrolase, aspartic peptidase, rennet; HET: NAG; 1.60A {Camelus dromedarius} PDB: 4aa8_A 1czi_E* 1cms_A 4cms_A 3cms_A
Probab=100.00 E-value=1.1e-56 Score=451.90 Aligned_cols=296 Identities=43% Similarity=0.811 Sum_probs=264.0
Q ss_pred eEeceecCCceEEEEEEecCCCceEEEEEeCCCCCeeeeCCCCCCCccccCCCCCCCCCCCceeeCCceEEEEecCCeeE
Q 011141 79 IVALKNYMDAQYFGEIGIGTPPQNFTVIFDTGSSNLWVPSSKCYFSIACYFHSKYRSGRSSTYKKNGKSADIHYGTGAIS 158 (492)
Q Consensus 79 ~~~l~~~~~~~Y~~~i~iGtP~Q~~~v~lDTGSs~~WV~~~~C~~~~~C~~~~~y~~~~SsT~~~~~~~~~i~Yg~gs~~ 158 (492)
.+||.|+.|.+|+++|+||||||+++|++||||+++||++..|. ...|..++.|+|++|+||+..++.|.+.|++|+++
T Consensus 2 ~~~l~n~~d~~Y~~~i~iGtP~Q~~~v~~DTGSs~~Wv~~~~C~-~~~C~~~~~y~~~~SsT~~~~~~~~~i~Yg~gs~~ 80 (320)
T 4aa9_A 2 REPLTSYLDSQYFGKIYIGTPPQEFTVVFDTGSSDLWVPSIYCK-SNVCKNHHRFDPRKSSTFRNLGKPLSIHYGTGSME 80 (320)
T ss_dssp ------CCCCCCEEEEEETTTTEEEEEEEETTCCCEEEEBTTCC-SHHHHTSCCBCGGGCTTCEEEEEEEEEEETTEEEE
T ss_pred CccceeccCCEEEEEEEECCCCeEEEEEEeCCCCceEEcCCCCC-ccccCCCCCCCCCCCcCeEcCCcEEEEEECCcEEE
Confidence 36899999999999999999999999999999999999999996 56899999999999999999999999999999999
Q ss_pred eeEEEeEEEECceeecccEEEEEEecCCccccccccceeecCCcccccCCCCCchHHHHHhcCCCCCCeEEEEecCCCCC
Q 011141 159 GFFSEDHVKIGDLVVKDQEFIEATREPSLTFLLAKFDGILGLGFQEISVGKAVPVWYNMVNQGLVNEPVFSFWFNRNADE 238 (492)
Q Consensus 159 G~~~~D~v~~g~~~v~~~~fg~~~~~~~~~~~~~~~dGIlGLg~~~~s~~~~~~~~~~L~~qg~I~~~~FSl~l~~~~~~ 238 (492)
|.+++|+|+||+.+++++.||++....+..+....++||||||++..+.....+++++|++||+|++++||+||.+.
T Consensus 81 G~~~~D~v~ig~~~v~~~~fg~~~~~~~~~~~~~~~~GilGLg~~~~s~~~~~~~~~~l~~~g~i~~~~Fs~~l~~~--- 157 (320)
T 4aa9_A 81 GFLGYDTVTVSNIVDPNQTVGLSTEQPGEVFTYSEFDGILGLAYPSLASEYSVPVFDNMMDRHLVARDLFSVYMDRN--- 157 (320)
T ss_dssp EEEEEEEEEETTEEEEEEEEEEEEECCSHHHHSCCCSEEEECSCGGGSCTTCCCHHHHHHHTTCSSSSEEEEECCSS---
T ss_pred EEEEEEEEEECCEeecCeEEEEEEEcccccccccCcccEEecCcccccccCCCCHHHHHHhCCCCCCceEEEEeCCC---
Confidence 99999999999999999999999987765566667899999999998887788999999999999999999999985
Q ss_pred CCCcEEEeCcccCCCCcccceEEeccCccceEEEeceEEEcCccccccCCCceEEEcCCCCceeccHHHHHHHHHHhCCc
Q 011141 239 EEGGEIVFGGMDPDHYKGEHTYVPVTQKGYWQFDMGDVMIDGQTTGFCAGGCAAIADSGTSLLAGPTTIITQVNHAIGAT 318 (492)
Q Consensus 239 ~~~G~L~fGgiD~~~~~g~l~~~p~~~~~~w~v~l~~i~vg~~~~~~~~~~~~aiiDTGtt~i~lP~~~~~~l~~~i~~~ 318 (492)
...|+|+|||+|+++|.|++.|+|+.+.++|.|.+++|+|+++.+. +..+..++|||||+++++|.+++++|++++++.
T Consensus 158 ~~~G~l~fGg~d~~~~~g~l~~~p~~~~~~w~v~l~~i~v~~~~~~-~~~~~~~iiDsGtt~~~lP~~~~~~i~~~~~~~ 236 (320)
T 4aa9_A 158 GQGSMLTLGAIDPSYYTGSLHWVPVTLQQYWQFTVDSVTINGVAVA-CVGGCQAILDTGTSVLFGPSSDILKIQMAIGAT 236 (320)
T ss_dssp SSCCEEEETCCCGGGEEEEEEEEECSSBTTBEEEECEEEETTEEEE-STTCEEEEECTTCSSEEEEHHHHHHHHHHTTCE
T ss_pred CCCeEEEEcccCHHHccCceEEEEcccCCceEEEEeEEEECCEEec-cCCCcEEEEECCCCcEECCHHHHHHHHHHhCCc
Confidence 2379999999999999999999999999999999999999998775 346788999999999999999999999999765
Q ss_pred cccccccchhhcchhHHHHHHhhcccCcccccccccccccCCCCcccccccccccccCCCCCCCCCcccCchhHHHHHHH
Q 011141 319 GIVSQECKAVVSQYGEEIINMLLAKDEPQKICSQIGLCTFDGSRGVSMGIESVVPENNHRASGGFHDAMCSTCEMAVVWM 398 (492)
Q Consensus 319 ~~~~~~C~~~~~~y~~~~~~~~~~~~~~~~~c~~~~~C~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~ 398 (492)
.
T Consensus 237 ~------------------------------------------------------------------------------- 237 (320)
T 4aa9_A 237 E------------------------------------------------------------------------------- 237 (320)
T ss_dssp E-------------------------------------------------------------------------------
T ss_pred c-------------------------------------------------------------------------------
Confidence 1
Q ss_pred HHHHhhhchHHHHHHHHHhhcccCCCCCCceeeeCccCCCCCcEEEEECCEEEeeCcCcceEEeCcCCcceeeeceeecc
Q 011141 399 QNQLKQNQTQERILNYVNELCDRLPSPMGESAVDCSRLSSLPIVSFTIGGKIFDLTPDQYILKVGEGDAAQCISGFSALD 478 (492)
Q Consensus 399 ~~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~c~~~~~~p~~~f~~~~~~~~l~~~~y~~~~~~~~~~~C~~~~~~~~ 478 (492)
...|.|.++|+....+|+|+|+|+|+.++|+|++|+.+. ...|+++|+...
T Consensus 238 -------------------------~~~g~~~~~C~~~~~~p~i~f~f~g~~~~l~~~~y~~~~----~~~C~~~i~~~~ 288 (320)
T 4aa9_A 238 -------------------------NRYGEFDVNCGNLRSMPTVVFEINGRDYPLSPSAYTSKD----QGFCTSGFQGDN 288 (320)
T ss_dssp -------------------------CTTSCEEECGGGGGGCCCEEEEETTEEEEECHHHHEEEE----TTEEEESEEEET
T ss_pred -------------------------cCCCcEEEeCCCCCcCceEEEEECCEEEEECHHHhccCC----CCeEEEEEEcCC
Confidence 225679999999889999999999999999999999862 257999998743
Q ss_pred cCCCCCCeEEEcC
Q 011141 479 VAPPRGPLWYVYS 491 (492)
Q Consensus 479 ~~~~~~~~~ilg~ 491 (492)
.++.||||+
T Consensus 289 ----~~~~~ilG~ 297 (320)
T 4aa9_A 289 ----NSELWILGD 297 (320)
T ss_dssp ----TCCCEEECH
T ss_pred ----CCCcEEECh
Confidence 456899997
No 9
>1htr_B Gastricsin; aspartyl protease; 1.62A {Homo sapiens} SCOP: b.50.1.2 PDB: 1avf_A
Probab=100.00 E-value=1e-56 Score=453.85 Aligned_cols=303 Identities=42% Similarity=0.819 Sum_probs=271.9
Q ss_pred eEeceecCCceEEEEEEecCCCceEEEEEeCCCCCeeeeCCCCCCCccccCCCCCCCCCCCceeeCCceEEEEecCCeeE
Q 011141 79 IVALKNYMDAQYFGEIGIGTPPQNFTVIFDTGSSNLWVPSSKCYFSIACYFHSKYRSGRSSTYKKNGKSADIHYGTGAIS 158 (492)
Q Consensus 79 ~~~l~~~~~~~Y~~~i~iGtP~Q~~~v~lDTGSs~~WV~~~~C~~~~~C~~~~~y~~~~SsT~~~~~~~~~i~Yg~gs~~ 158 (492)
.+||. +.+.+|+++|.||||||++.|++||||+++||+|..|. ...|..++.|||++|+||+..++.|.+.|++|++.
T Consensus 4 ~~~l~-~~~~~Y~~~i~iGtP~q~~~v~~DTGSs~lWv~~~~C~-~~~C~~~~~y~~~~SsT~~~~~~~~~i~Yg~gs~~ 81 (329)
T 1htr_B 4 YEPMA-YMDAAYFGEISIGTPPQNFLVLFDTGSSNLWVPSVYCQ-SQACTSHSRFNPSESSTYSTNGQTFSLQYGSGSLT 81 (329)
T ss_dssp CCGGG-GTTCCEEEEEEETTTTEEEEEEEETTCCCEEEEBTTCC-SHHHHTSCCBCGGGCTTCEEEEEEEEEEETTEEEE
T ss_pred eeeeE-EcCCEEEEEEEECCCCcEEEEEEcCCCccEEEecCCCC-CcccCCCCcCCCccCCCeEECCcEEEEEeCCCCeE
Confidence 47888 88999999999999999999999999999999999996 45799899999999999999999999999999999
Q ss_pred eeEEEeEEEECceeecccEEEEEEecCCccccccccceeecCCcccccCCCCCchHHHHHhcCCCCCCeEEEEecCCCCC
Q 011141 159 GFFSEDHVKIGDLVVKDQEFIEATREPSLTFLLAKFDGILGLGFQEISVGKAVPVWYNMVNQGLVNEPVFSFWFNRNADE 238 (492)
Q Consensus 159 G~~~~D~v~~g~~~v~~~~fg~~~~~~~~~~~~~~~dGIlGLg~~~~s~~~~~~~~~~L~~qg~I~~~~FSl~l~~~~~~ 238 (492)
|.+++|+|++|+.+++++.||++....+..|....++||||||++..+.....|++++|++||+|++++||+||.+....
T Consensus 82 G~~~~D~v~~g~~~~~~~~fg~~~~~~~~~~~~~~~~GilGLg~~~~s~~~~~~~~~~l~~qg~i~~~~Fs~~L~~~~~~ 161 (329)
T 1htr_B 82 GFFGYDTLTVQSIQVPNQEFGLSENEPGTNFVYAQFDGIMGLAYPALSVDEATTAMQGMVQEGALTSPVFSVYLSNQQGS 161 (329)
T ss_dssp EEEEEEEEEETTEEEEEEEEEEESSCSSGGGGGCSCCEEEECCCCSCCCTTCCSHHHHHHHTTCSSSSEEEEEECSSCSS
T ss_pred EEEEeeeEEEcceEECceEEEEEEEccccccccCCCceEEecCCCcccccCCCCHHHHHHhcCCCCCCEEEEEEcCCCCC
Confidence 99999999999999999999999977665566678899999999998877788999999999999999999999886422
Q ss_pred CCCcEEEeCcccCCCCcccceEEeccCccceEEEeceEEEcCccccccCCCceEEEcCCCCceeccHHHHHHHHHHhCCc
Q 011141 239 EEGGEIVFGGMDPDHYKGEHTYVPVTQKGYWQFDMGDVMIDGQTTGFCAGGCAAIADSGTSLLAGPTTIITQVNHAIGAT 318 (492)
Q Consensus 239 ~~~G~L~fGgiD~~~~~g~l~~~p~~~~~~w~v~l~~i~vg~~~~~~~~~~~~aiiDTGtt~i~lP~~~~~~l~~~i~~~ 318 (492)
..|+|+|||+|+++|.|++.|+|+.+.++|.|.+++|+|+++.+..+..+..++|||||+++++|.+++++|++++++.
T Consensus 162 -~~G~l~fGg~d~~~~~g~l~~~p~~~~~~~~v~l~~i~v~~~~~~~~~~~~~aiiDSGTt~~~lp~~~~~~l~~~~~~~ 240 (329)
T 1htr_B 162 -SGGAVVFGGVDSSLYTGQIYWAPVTQELYWQIGIEEFLIGGQASGWCSEGCQAIVDTGTSLLTVPQQYMSALLQATGAQ 240 (329)
T ss_dssp -EEEEEEESSCCGGGEEEEEEEEEBCSSSSCEEEECEEEETTEECCTTTTCEEEEECTTCCSEEEEGGGHHHHHHHHTCE
T ss_pred -CCcEEEEcccCHHHcCCceEEEECCCCceEEEEEeEEEECCceeeecCCCceEEEecCCccEECCHHHHHHHHHHhCCe
Confidence 3799999999999999999999999999999999999999987543456789999999999999999999999999765
Q ss_pred cccccccchhhcchhHHHHHHhhcccCcccccccccccccCCCCcccccccccccccCCCCCCCCCcccCchhHHHHHHH
Q 011141 319 GIVSQECKAVVSQYGEEIINMLLAKDEPQKICSQIGLCTFDGSRGVSMGIESVVPENNHRASGGFHDAMCSTCEMAVVWM 398 (492)
Q Consensus 319 ~~~~~~C~~~~~~y~~~~~~~~~~~~~~~~~c~~~~~C~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~ 398 (492)
.
T Consensus 241 ~------------------------------------------------------------------------------- 241 (329)
T 1htr_B 241 E------------------------------------------------------------------------------- 241 (329)
T ss_dssp E-------------------------------------------------------------------------------
T ss_pred e-------------------------------------------------------------------------------
Confidence 1
Q ss_pred HHHHhhhchHHHHHHHHHhhcccCCCCCCceeeeCccCCCCCcEEEEECCEEEeeCcCcceEEeCcCCcceeeeceeecc
Q 011141 399 QNQLKQNQTQERILNYVNELCDRLPSPMGESAVDCSRLSSLPIVSFTIGGKIFDLTPDQYILKVGEGDAAQCISGFSALD 478 (492)
Q Consensus 399 ~~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~c~~~~~~p~~~f~~~~~~~~l~~~~y~~~~~~~~~~~C~~~~~~~~ 478 (492)
...|.|.++|+....+|+|+|+|+|+.|+|+|++|+++.. +.|+++|++.+
T Consensus 242 -------------------------~~~g~~~~~C~~~~~~P~i~f~f~g~~~~i~~~~y~~~~~----g~C~~~~~~~~ 292 (329)
T 1htr_B 242 -------------------------DEYGQFLVNCNSIQNLPSLTFIINGVEFPLPPSSYILSNN----GYCTVGVEPTY 292 (329)
T ss_dssp -------------------------CTTSCEEECGGGGGGSCCEEEEETTEEEEECHHHHEEECS----SCEEESEEEEC
T ss_pred -------------------------cCCCeEEEeCCCcccCCcEEEEECCEEEEECHHHhcccCC----CEEEEEEEECC
Confidence 1245689999988899999999999999999999999865 28999999987
Q ss_pred cCCCCCC-eEEEcCC
Q 011141 479 VAPPRGP-LWYVYSC 492 (492)
Q Consensus 479 ~~~~~~~-~~ilg~~ 492 (492)
.+.+.++ .||||++
T Consensus 293 ~~~~~~~~~~iLG~~ 307 (329)
T 1htr_B 293 LSSQNGQPLWILGDV 307 (329)
T ss_dssp CCCTTSSCEEEECHH
T ss_pred CCCCCCCceEEEChH
Confidence 6555667 8999973
No 10
>1am5_A Pepsin, acid proteinase; aspartyl protease, hydrolase; 2.16A {Gadus morhua} SCOP: b.50.1.2
Probab=100.00 E-value=1.9e-56 Score=450.93 Aligned_cols=300 Identities=41% Similarity=0.754 Sum_probs=270.6
Q ss_pred eEeceecCCceEEEEEEecCCCceEEEEEeCCCCCeeeeCCCCCCCccccCCCCCCCCCCCceeeCCceEEEEecCCeeE
Q 011141 79 IVALKNYMDAQYFGEIGIGTPPQNFTVIFDTGSSNLWVPSSKCYFSIACYFHSKYRSGRSSTYKKNGKSADIHYGTGAIS 158 (492)
Q Consensus 79 ~~~l~~~~~~~Y~~~i~iGtP~Q~~~v~lDTGSs~~WV~~~~C~~~~~C~~~~~y~~~~SsT~~~~~~~~~i~Yg~gs~~ 158 (492)
.+||.|+.+.+|+++|.||||||++.|++||||+++||+|..|. ...|..++.|+|++|+||+..++.|.+.|++|+++
T Consensus 3 ~~~l~n~~~~~Y~~~i~iGtP~q~~~v~~DTGSs~~Wv~~~~C~-~~~C~~~~~y~~~~SsT~~~~~~~~~i~Yg~Gs~~ 81 (324)
T 1am5_A 3 TEQMKNEADTEYYGVISIGTPPESFKVIFDTGSSNLWVSSSHCS-AQACSNHNKFKPRQSSTYVETGKTVDLTYGTGGMR 81 (324)
T ss_dssp EEEEEEETTTEEEEEEEETTTTEEEEEEEETTCCCEEECBTTCC-SHHHHTSCCBCGGGCTTCEEEEEEEEEECSSCEEE
T ss_pred eeeeecCCCCEEEEEEEECCCCeEEEEEEeCCCcceEEecCCCC-cccccCCCcCCCccCCCeEeCCcEEEEEECCCCeE
Confidence 47999999999999999999999999999999999999999996 45799999999999999999999999999999999
Q ss_pred eeEEEeEEEECceeecccEEEEEEecCCccccccccceeecCCcccccCCCCCchHHHHHhcCCCCCCeEEEEecCCCCC
Q 011141 159 GFFSEDHVKIGDLVVKDQEFIEATREPSLTFLLAKFDGILGLGFQEISVGKAVPVWYNMVNQGLVNEPVFSFWFNRNADE 238 (492)
Q Consensus 159 G~~~~D~v~~g~~~v~~~~fg~~~~~~~~~~~~~~~dGIlGLg~~~~s~~~~~~~~~~L~~qg~I~~~~FSl~l~~~~~~ 238 (492)
|.+++|+|++|+..++++.||++....+..|....++||||||++..+.....|++++|++||+|++++||+||.+...
T Consensus 82 G~~~~D~v~~g~~~~~~~~fg~~~~~~~~~~~~~~~~GilGLg~~~~s~~~~~~~~~~l~~qg~i~~~~FS~~l~~~~~- 160 (324)
T 1am5_A 82 GILGQDTVSVGGGSDPNQELGESQTEPGPFQAAAPFDGILGLAYPSIAAAGAVPVFDNMGSQSLVEKDLFSFYLSGGGA- 160 (324)
T ss_dssp EEEEEEEEESSSSCEEEEEEEEEEECCSTTTTTCSSSEEEECSCGGGCGGGCCCHHHHHHHTTCSSSSEEEEECCSTTC-
T ss_pred EEEEECceeECCcEEcccEEEEEEecccccccCCCCceEEecCCccccccCCCchHHhHHhcCCCCCCEEEEEecCCCC-
Confidence 9999999999999999999999998766556666789999999998887778899999999999999999999988632
Q ss_pred CCCcEEEeCcccCCCCcccceEEeccCccceEEEeceEEEcCccccccCCCceEEEcCCCCceeccHHHHHHHHHHhCCc
Q 011141 239 EEGGEIVFGGMDPDHYKGEHTYVPVTQKGYWQFDMGDVMIDGQTTGFCAGGCAAIADSGTSLLAGPTTIITQVNHAIGAT 318 (492)
Q Consensus 239 ~~~G~L~fGgiD~~~~~g~l~~~p~~~~~~w~v~l~~i~vg~~~~~~~~~~~~aiiDTGtt~i~lP~~~~~~l~~~i~~~ 318 (492)
..|+|+|||+|+++|.|++.|+|+...++|.|.+++|+|+++.+. +.. ..++|||||+++++|.+++++|.+++++.
T Consensus 161 -~~G~l~fGg~d~~~~~g~l~~~p~~~~~~~~v~l~~i~v~~~~~~-~~~-~~aiiDSGTt~~~lp~~~~~~l~~~~~~~ 237 (324)
T 1am5_A 161 -NGSEVMLGGVDNSHYTGSIHWIPVTAEKYWQVALDGITVNGQTAA-CEG-CQAIVDTGTSKIVAPVSALANIMKDIGAS 237 (324)
T ss_dssp -SCEEEEESSCCGGGBCSCCEEEEEEEETTEEEEECEEEETTEECC-CCC-EEEEECTTCSSEEECTTTHHHHHHHHTCE
T ss_pred -CCcEEEECccCHHHcCCceEEEecCCCcEEEEEEeEEEECCceee-ccC-ceEEEecCCccEECCHHHHHHHHHHhCCc
Confidence 379999999999999999999999988999999999999998753 333 88999999999999999999999998653
Q ss_pred cccccccchhhcchhHHHHHHhhcccCcccccccccccccCCCCcccccccccccccCCCCCCCCCcccCchhHHHHHHH
Q 011141 319 GIVSQECKAVVSQYGEEIINMLLAKDEPQKICSQIGLCTFDGSRGVSMGIESVVPENNHRASGGFHDAMCSTCEMAVVWM 398 (492)
Q Consensus 319 ~~~~~~C~~~~~~y~~~~~~~~~~~~~~~~~c~~~~~C~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~ 398 (492)
.
T Consensus 238 -~------------------------------------------------------------------------------ 238 (324)
T 1am5_A 238 -E------------------------------------------------------------------------------ 238 (324)
T ss_dssp -E------------------------------------------------------------------------------
T ss_pred -c------------------------------------------------------------------------------
Confidence 0
Q ss_pred HHHHhhhchHHHHHHHHHhhcccCCCCCCceeeeCccCCCCCcEEEEECCEEEeeCcCcceEEeCcCCcceeeeceeecc
Q 011141 399 QNQLKQNQTQERILNYVNELCDRLPSPMGESAVDCSRLSSLPIVSFTIGGKIFDLTPDQYILKVGEGDAAQCISGFSALD 478 (492)
Q Consensus 399 ~~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~c~~~~~~p~~~f~~~~~~~~l~~~~y~~~~~~~~~~~C~~~~~~~~ 478 (492)
..|.|.++|+....+|+|+|+|+|+.|+|+|++|+++. ...|+++|++.+
T Consensus 239 --------------------------~~g~~~~~C~~~~~~P~i~f~f~g~~~~i~~~~y~~~~----~~~C~~~~~~~~ 288 (324)
T 1am5_A 239 --------------------------NQGEMMGNCASVQSLPDITFTINGVKQPLPPSAYIEGD----QAFCTSGLGSSG 288 (324)
T ss_dssp --------------------------CCCCEECCTTSSSSSCCEEEEETTEEEEECHHHHEEES----SSCEEECEEECC
T ss_pred --------------------------cCCcEEEeCCCcccCCcEEEEECCEEEEECHHHhcccC----CCeEEEEEEECc
Confidence 14568899999889999999999999999999999986 257999999988
Q ss_pred cCCCCCCeEEEcCC
Q 011141 479 VAPPRGPLWYVYSC 492 (492)
Q Consensus 479 ~~~~~~~~~ilg~~ 492 (492)
.+.+.++.||||++
T Consensus 289 ~~~~~~~~~ilG~~ 302 (324)
T 1am5_A 289 VPSNTSELWIFGDV 302 (324)
T ss_dssp SCCSSSCEEEECHH
T ss_pred cCCCCCCcEEEChH
Confidence 65555679999973
No 11
>3qvc_A Histo-aspartic protease; HAP, plasmepsin, zymogen, hydrolase; 2.10A {Plasmodium falciparum} PDB: 3qvi_A* 3fns_A 3fnt_A* 3fnu_A*
Probab=100.00 E-value=3e-56 Score=466.52 Aligned_cols=299 Identities=29% Similarity=0.527 Sum_probs=268.7
Q ss_pred CcceEeceecCCceEEEEEEecCCCceEEEEEeCCCCCeeeeCCCCCCCccccCCCCCCCCCCCceeeCCceEEEEecCC
Q 011141 76 DADIVALKNYMDAQYFGEIGIGTPPQNFTVIFDTGSSNLWVPSSKCYFSIACYFHSKYRSGRSSTYKKNGKSADIHYGTG 155 (492)
Q Consensus 76 ~~~~~~l~~~~~~~Y~~~i~iGtP~Q~~~v~lDTGSs~~WV~~~~C~~~~~C~~~~~y~~~~SsT~~~~~~~~~i~Yg~g 155 (492)
....+||.|+.|.+|+++|+||||||++.|++||||+++||++..|. ...|..++.|+|++|+||+..++.|.+.|++|
T Consensus 125 ~~~~~pL~n~~d~~Y~~~I~IGTPpQ~~~vi~DTGSs~lWV~s~~C~-s~~C~~~~~ydps~SsT~~~~~~~f~i~YgdG 203 (451)
T 3qvc_A 125 EFDNVELKDLANVLSFGEAKLGDNGQKFNFLFHTASSNVWVPSIKCT-SESCESKNHYDSSKSKTYEKDDTPVKLTSKAG 203 (451)
T ss_dssp --CCCCGGGGBCEEEEEEEEETTTTEEEEEEEESSBCSEEEEBTTCC-SGGGTTSCCBCGGGCTTCEEEEEEEEEECSSE
T ss_pred cCCccceeecCCCEEEEEEEECCCCcEEEEEEcCCCccEEEecCCCC-ccccCCCCCCCCCCCcccccCCCEEEEEECCC
Confidence 56678999999999999999999999999999999999999999996 56899999999999999999999999999999
Q ss_pred eeEeeEEEeEEEECceeecccEEEEEEe----cCCccccccccceeecCCcccccCCCCCchHHHHHhcCCCCCCeEEEE
Q 011141 156 AISGFFSEDHVKIGDLVVKDQEFIEATR----EPSLTFLLAKFDGILGLGFQEISVGKAVPVWYNMVNQGLVNEPVFSFW 231 (492)
Q Consensus 156 s~~G~~~~D~v~~g~~~v~~~~fg~~~~----~~~~~~~~~~~dGIlGLg~~~~s~~~~~~~~~~L~~qg~I~~~~FSl~ 231 (492)
+++|.+++|+|++|+.+++ +.||++.. .++ |....++||||||++..+.....|++++|++||+|++++||+|
T Consensus 204 s~~G~~~~Dtv~igg~~v~-~~Fg~a~~t~~~~~~--f~~~~~dGILGLg~~~~s~~~~~~~~~~L~~qg~I~~~~FS~~ 280 (451)
T 3qvc_A 204 TISGIFSKDLVTIGKLSVP-YKFIEMTEIVGFEPF--YSESDVDGVFGLGWKDLSIGSIDPYIVELKTQNKIEQAVYSIY 280 (451)
T ss_dssp EEEEEEEEEEEEETTEEEE-EEEEEEEEEEECTTH--HHHSCCCEEEECSSBCSSSSCCCCHHHHHHHTTSSSSSEEEEE
T ss_pred EEEEEEEEEEEEECCEEEE-EEEEEEEeccccCCC--ccCCCCCEEEecCCCcccccCCCCHHHHHHHcCCCCCCEEEEE
Confidence 9999999999999999999 99999987 544 5556789999999999888778899999999999999999999
Q ss_pred ecCCCCCCCCcEEEeCcccCCCCcccceEEeccCccceEEEeceEEEcCccccccCCCceEEEcCCCCceeccHHHHHHH
Q 011141 232 FNRNADEEEGGEIVFGGMDPDHYKGEHTYVPVTQKGYWQFDMGDVMIDGQTTGFCAGGCAAIADSGTSLLAGPTTIITQV 311 (492)
Q Consensus 232 l~~~~~~~~~G~L~fGgiD~~~~~g~l~~~p~~~~~~w~v~l~~i~vg~~~~~~~~~~~~aiiDTGtt~i~lP~~~~~~l 311 (492)
|.+.. ...|+|+|||+|+++|.|++.|+|+.++++|.|.++ |+|++. +.....++|||||+++++|.+++++|
T Consensus 281 L~~~~--~~~G~l~fGgiD~s~y~G~l~~~pv~~~~~w~v~l~-I~Vgg~----~~~~~~aiiDSGTt~i~lP~~~~~~i 353 (451)
T 3qvc_A 281 LPPEN--KNKGYLTIGGIEERFFDGPLNYEKLNHDLMWQVDLD-VHFGNV----SSKKANVILDSATSVITVPTEFFNQF 353 (451)
T ss_dssp CCTTC--TTEEEEEESSCCGGGEEEEEEEEECSSTTSSEEEEE-EEETTE----EEEEEEEEECTTBSSEEECHHHHHHH
T ss_pred EcCCC--CCCCEEEECCcchhhcCCceEEEEcccCCeeEEEEE-EEECCc----cCCCceEEEeCCCccccCCHHHHHHH
Confidence 99873 237999999999999999999999999999999999 999997 33567899999999999999999999
Q ss_pred HHHhCCccccccccchhhcchhHHHHHHhhcccCcccccccccccccCCCCcccccccccccccCCCCCCCCCcccCchh
Q 011141 312 NHAIGATGIVSQECKAVVSQYGEEIINMLLAKDEPQKICSQIGLCTFDGSRGVSMGIESVVPENNHRASGGFHDAMCSTC 391 (492)
Q Consensus 312 ~~~i~~~~~~~~~C~~~~~~y~~~~~~~~~~~~~~~~~c~~~~~C~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~c~~~ 391 (492)
++++++..
T Consensus 354 ~~~i~a~~------------------------------------------------------------------------ 361 (451)
T 3qvc_A 354 VESASVFK------------------------------------------------------------------------ 361 (451)
T ss_dssp HTTTTCEE------------------------------------------------------------------------
T ss_pred HHHcCCee------------------------------------------------------------------------
Confidence 99997751
Q ss_pred HHHHHHHHHHHhhhchHHHHHHHHHhhcccCCCCCCceeeeCccCCCCCcEEEEECCEEEeeCcCcceEEeCcCCcceee
Q 011141 392 EMAVVWMQNQLKQNQTQERILNYVNELCDRLPSPMGESAVDCSRLSSLPIVSFTIGGKIFDLTPDQYILKVGEGDAAQCI 471 (492)
Q Consensus 392 ~~~~~~~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~c~~~~~~p~~~f~~~~~~~~l~~~~y~~~~~~~~~~~C~ 471 (492)
.+..|.|.++|+ ...+|+|+|+|+|..++|+|++|+++..+.+...|+
T Consensus 362 -------------------------------~~~~g~y~v~C~-~~~~P~itf~fgg~~i~lp~~~yi~~~~~~~~~~C~ 409 (451)
T 3qvc_A 362 -------------------------------VPFLSLYVTTCG-NTKLPTLEYRSPNKVYTLEPKQYLEPLENIFSALCM 409 (451)
T ss_dssp -------------------------------CTTSSCEEEETT-CTTCCCEEEEETTEEEEECHHHHEEECTTTSTTEEE
T ss_pred -------------------------------cCCCCeEEeeCC-cCcCCcEEEEECCEEEEEcHHHheeecccCCCCeEE
Confidence 112577999999 789999999999999999999999987654557899
Q ss_pred eceeecccCCCCCCeEEEcCC
Q 011141 472 SGFSALDVAPPRGPLWYVYSC 492 (492)
Q Consensus 472 ~~~~~~~~~~~~~~~~ilg~~ 492 (492)
++|++.+.+ ++.||||++
T Consensus 410 ~~i~~~~~~---~~~~ILG~~ 427 (451)
T 3qvc_A 410 LNIVPIDLE---KNTFVLGDP 427 (451)
T ss_dssp ECEEECCCS---TTEEEECHH
T ss_pred EEEEeCCCC---CCCEEECHH
Confidence 999987632 578999973
No 12
>1miq_A Plasmepsin; aspartic proteinase zymogen, domain opening, hydrolase; 2.50A {Plasmodium vivax} SCOP: b.50.1.2 PDB: 1ls5_A*
Probab=100.00 E-value=4.4e-56 Score=456.63 Aligned_cols=299 Identities=31% Similarity=0.641 Sum_probs=268.0
Q ss_pred CcceEeceecCCceEEEEEEecCCCceEEEEEeCCCCCeeeeCCCCCCCccccCCCCCCCCCCCceeeCCceEEEEecCC
Q 011141 76 DADIVALKNYMDAQYFGEIGIGTPPQNFTVIFDTGSSNLWVPSSKCYFSIACYFHSKYRSGRSSTYKKNGKSADIHYGTG 155 (492)
Q Consensus 76 ~~~~~~l~~~~~~~Y~~~i~iGtP~Q~~~v~lDTGSs~~WV~~~~C~~~~~C~~~~~y~~~~SsT~~~~~~~~~i~Yg~g 155 (492)
....+||.|+.+.+|+++|.||||||+|.|+|||||+++||+|..|. ...|..++.|+|++|+||+..++.|.+.|++|
T Consensus 50 ~~~~~pl~~~~~~~Y~~~i~iGTP~Q~~~v~~DTGSs~lWv~~~~C~-~~~C~~~~~y~~~~SsT~~~~~~~~~i~Yg~G 128 (375)
T 1miq_A 50 ENDVIELDDVANIMFYGEGEVGDNHQKFMLIFDTGSANLWVPSKKCN-SSGCSIKNLYDSSKSKSYEKDGTKVDITYGSG 128 (375)
T ss_dssp TTBCCCGGGTBCEEEECCCEETTTTEECCEEEETTCCCEEEEBTTCC-SSGGGGSCCBCGGGCTTCEEEEEEEEEEETTE
T ss_pred CcceEEcccCCCCEEEEEEEECCCCeEEEEEEeCCCcceEEccCCCC-cccccCCCcCCCccCCceEECCcEEEEEeCCC
Confidence 44568999999999999999999999999999999999999999995 56899999999999999999999999999999
Q ss_pred eeEeeEEEeEEEECceeecccEEEEEEe----cCCccccccccceeecCCcccccCCCCCchHHHHHhcCCCCCCeEEEE
Q 011141 156 AISGFFSEDHVKIGDLVVKDQEFIEATR----EPSLTFLLAKFDGILGLGFQEISVGKAVPVWYNMVNQGLVNEPVFSFW 231 (492)
Q Consensus 156 s~~G~~~~D~v~~g~~~v~~~~fg~~~~----~~~~~~~~~~~dGIlGLg~~~~s~~~~~~~~~~L~~qg~I~~~~FSl~ 231 (492)
+++|.+++|+|+||+..+++ .||++.. .+ .|....++||||||++..+.....|++++|++||+|++++||+|
T Consensus 129 s~~G~~~~Dtv~ig~~~v~~-~Fg~~~~~~~~~~--~f~~~~~dGilGLg~~~~s~~~~~~~~~~l~~qg~i~~~~FS~~ 205 (375)
T 1miq_A 129 TVKGFFSKDLVTLGHLSMPY-KFIEVTDTDDLEP--IYSSVEFDGILGLGWKDLSIGSIDPIVVELKNQNKIDNALFTFY 205 (375)
T ss_dssp EEEEEEEEEEEEETTEEEEE-EEEEEEECGGGTT--HHHHSCCCEEEECSSCCTTCSSCCCHHHHHHHTTSSSSSEEEEE
T ss_pred eEEEEEEEEEEEEcCceECc-EEEEEEecccccc--ccccCCCceEEeCCCCcccccCCCCHHHHHHhccCcCCCEEEEE
Confidence 99999999999999999999 9999997 44 35556789999999999888788899999999999999999999
Q ss_pred ecCCCCCCCCcEEEeCcccCCCCcccceEEeccCccceEEEeceEEEcCccccccCCCceEEEcCCCCceeccHHHHHHH
Q 011141 232 FNRNADEEEGGEIVFGGMDPDHYKGEHTYVPVTQKGYWQFDMGDVMIDGQTTGFCAGGCAAIADSGTSLLAGPTTIITQV 311 (492)
Q Consensus 232 l~~~~~~~~~G~L~fGgiD~~~~~g~l~~~p~~~~~~w~v~l~~i~vg~~~~~~~~~~~~aiiDTGtt~i~lP~~~~~~l 311 (492)
|.+... ..|+|+|||+|+++|.|++.|+|+.+.++|.|.++ |+|+++.+ .+..++|||||+++++|.+++++|
T Consensus 206 L~~~~~--~~G~l~fGg~d~~~~~g~l~~~p~~~~~~w~v~l~-i~v~g~~~----~~~~aiiDSGTs~~~lP~~~~~~l 278 (375)
T 1miq_A 206 LPVHDV--HAGYLTIGGIEEKFYEGNITYEKLNHDLYWQIDLD-VHFGKQTM----EKANVIVDSGTTTITAPSEFLNKF 278 (375)
T ss_dssp CCTTCT--TEEEEEESSCCGGGEEEEEEEEEBSSSSSSEEEEE-EEETTEEE----EEEEEEECTTBSSEEECHHHHHHH
T ss_pred ecCCCC--CCeEEEEcccCHHHcCCceEEEecCCCceEEEEEE-EEECCEEc----ccceEEecCCCccEEcCHHHHHHH
Confidence 998632 47999999999999999999999999999999999 99999876 457899999999999999999999
Q ss_pred HHHhCCccccccccchhhcchhHHHHHHhhcccCcccccccccccccCCCCcccccccccccccCCCCCCCCCcccCchh
Q 011141 312 NHAIGATGIVSQECKAVVSQYGEEIINMLLAKDEPQKICSQIGLCTFDGSRGVSMGIESVVPENNHRASGGFHDAMCSTC 391 (492)
Q Consensus 312 ~~~i~~~~~~~~~C~~~~~~y~~~~~~~~~~~~~~~~~c~~~~~C~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~c~~~ 391 (492)
++++++..
T Consensus 279 ~~~~~~~~------------------------------------------------------------------------ 286 (375)
T 1miq_A 279 FANLNVIK------------------------------------------------------------------------ 286 (375)
T ss_dssp HHHHTCEE------------------------------------------------------------------------
T ss_pred HHHhCCcc------------------------------------------------------------------------
Confidence 99997741
Q ss_pred HHHHHHHHHHHhhhchHHHHHHHHHhhcccCCCCCCceeeeCccCCCCCcEEEEECCEEEeeCcCcceEEeCcCCcceee
Q 011141 392 EMAVVWMQNQLKQNQTQERILNYVNELCDRLPSPMGESAVDCSRLSSLPIVSFTIGGKIFDLTPDQYILKVGEGDAAQCI 471 (492)
Q Consensus 392 ~~~~~~~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~c~~~~~~p~~~f~~~~~~~~l~~~~y~~~~~~~~~~~C~ 471 (492)
+...|.|.++|+. ..+|+|+|+|+|+.|+|+|++|+++....+...|+
T Consensus 287 -------------------------------~~~~g~~~~~C~~-~~~P~i~f~f~g~~~~l~~~~yi~~~~~~g~~~C~ 334 (375)
T 1miq_A 287 -------------------------------VPFLPFYVTTCDN-KEMPTLEFKSANNTYTLEPEYYMNPILEVDDTLCM 334 (375)
T ss_dssp -------------------------------CTTSSCEEEETTC-TTCCCEEEECSSCEEEECGGGSEEESSSSSCSEEE
T ss_pred -------------------------------cCCCCeEEEECCC-CCCCcEEEEECCEEEEECHHHhEeeccCCCCCeEE
Confidence 1235679999998 78999999999999999999999987543446899
Q ss_pred eceeecccCCCCCCeEEEcCC
Q 011141 472 SGFSALDVAPPRGPLWYVYSC 492 (492)
Q Consensus 472 ~~~~~~~~~~~~~~~~ilg~~ 492 (492)
++|++.+.+ ++.||||++
T Consensus 335 ~~~~~~~~~---~~~~ILG~~ 352 (375)
T 1miq_A 335 ITMLPVDID---SNTFILGDP 352 (375)
T ss_dssp ESEEECCSS---SSEEEECHH
T ss_pred EEEEECCCC---CCcEEECHH
Confidence 999987742 268999974
No 13
>2bju_A Plasmepsin II; aspartic proteinase, drug design, malaria, aspartyl protease, glycoprotein, hydrolase, signal, zymogen; HET: IH4; 1.56A {Plasmodium falciparum} SCOP: b.50.1.2 PDB: 1pfz_A 1xdh_A* 1lf3_A 1w6h_A* 1w6i_A* 1lf4_A* 1lf2_A* 1lee_A* 1m43_A* 2igx_A* 1sme_A* 1me6_A* 1xe6_A* 1xe5_A* 2igy_A* 2r9b_A 3f9q_A 3qrv_A 3qs1_A* 2anl_A* ...
Probab=100.00 E-value=8.8e-56 Score=462.52 Aligned_cols=300 Identities=30% Similarity=0.608 Sum_probs=267.8
Q ss_pred CcceEeceecCCceEEEEEEecCCCceEEEEEeCCCCCeeeeCCCCCCCccccCCCCCCCCCCCceeeCCceEEEEecCC
Q 011141 76 DADIVALKNYMDAQYFGEIGIGTPPQNFTVIFDTGSSNLWVPSSKCYFSIACYFHSKYRSGRSSTYKKNGKSADIHYGTG 155 (492)
Q Consensus 76 ~~~~~~l~~~~~~~Y~~~i~iGtP~Q~~~v~lDTGSs~~WV~~~~C~~~~~C~~~~~y~~~~SsT~~~~~~~~~i~Yg~g 155 (492)
....+||.|+.+.+|+++|+||||||++.|++||||+++||+|..|. ...|..++.|+|++|+||+..++.|.+.|++|
T Consensus 126 ~~~~~~L~n~~~~~Y~~~I~IGTP~Q~~~vi~DTGSs~lWV~~~~C~-~~~C~~~~~ydps~SsT~~~~~~~~~i~YgdG 204 (453)
T 2bju_A 126 SNDNIELVDFQNIMFYGDAEVGDNQQPFTFILDTGSANLWVPSVKCT-TAGCLTKHLYDSSKSRTYEKDGTKVEMNYVSG 204 (453)
T ss_dssp CSEEEEEEEETTTEEEEEEEETTTTEEEEEEEETTCCCEEEEBTTCC-STTGGGSCCBCGGGCTTCEEEEEEEEEECSSS
T ss_pred CCCceeeEecCCCEEEEEEEECCCCeEEEEEEECCCcceEEeccCCC-ccccCCCCcCCCccCCceeECCcEEEEEcCCC
Confidence 34678999999999999999999999999999999999999999996 56899999999999999999999999999999
Q ss_pred eeEeeEEEeEEEECceeecccEEEEEEecC--CccccccccceeecCCcccccCCCCCchHHHHHhcCCCCCCeEEEEec
Q 011141 156 AISGFFSEDHVKIGDLVVKDQEFIEATREP--SLTFLLAKFDGILGLGFQEISVGKAVPVWYNMVNQGLVNEPVFSFWFN 233 (492)
Q Consensus 156 s~~G~~~~D~v~~g~~~v~~~~fg~~~~~~--~~~~~~~~~dGIlGLg~~~~s~~~~~~~~~~L~~qg~I~~~~FSl~l~ 233 (492)
+++|.+++|+|++|+.+++ +.||++.... +..+....++||||||++..+.....|++++|++||+|++++||+||.
T Consensus 205 s~~G~~~~Dtv~ig~~~v~-~~Fg~a~~~~~~g~~f~~~~~dGIlGLg~~~~s~~~~~~~~~~L~~qg~i~~~~FS~~L~ 283 (453)
T 2bju_A 205 TVSGFFSKDLVTVGNLSLP-YKFIEVIDTNGFEPTYTASTFDGILGLGWKDLSIGSVDPIVVELKNQNKIENALFTFYLP 283 (453)
T ss_dssp EEEEEEEEEEEEETTEEEE-EEEEEEEECGGGTTHHHHSSCCEEEECSCGGGSTTCCCCHHHHHHHTTSSSSCEEEEECC
T ss_pred CeEEEEEEEEEEEeCcEEE-EEEEEEEEecccCccccccCCceeEeccCCcccccCCCcHHHHHHHCCCCCCCEEEEEeC
Confidence 9999999999999999999 9999999876 444555678999999999988877889999999999999999999998
Q ss_pred CCCCCCCCcEEEeCcccCCCCcccceEEeccCccceEEEeceEEEcCccccccCCCceEEEcCCCCceeccHHHHHHHHH
Q 011141 234 RNADEEEGGEIVFGGMDPDHYKGEHTYVPVTQKGYWQFDMGDVMIDGQTTGFCAGGCAAIADSGTSLLAGPTTIITQVNH 313 (492)
Q Consensus 234 ~~~~~~~~G~L~fGgiD~~~~~g~l~~~p~~~~~~w~v~l~~i~vg~~~~~~~~~~~~aiiDTGtt~i~lP~~~~~~l~~ 313 (492)
+.+ ...|+|+|||+|+++|.|++.|+|+.+.++|.|.++ |+|++ .+ . .+..++|||||+++++|.+++++|++
T Consensus 284 ~~~--~~~G~l~fGg~D~~~y~G~l~~~pv~~~~~w~V~l~-I~Vgg-~~--~-~~~~aIiDSGTsl~~lP~~~~~~l~~ 356 (453)
T 2bju_A 284 VHD--KHTGFLTIGGIEERFYEGPLTYEKLNHDLYWQITLD-AHVGN-IM--L-EKANCIVDSGTSAITVPTDFLNKMLQ 356 (453)
T ss_dssp BTT--TBCEEEEESSCCGGGEEEEEEEEEEEEETTEEEEEE-EEETT-EE--E-EEEEEEECTTCCSEEECHHHHHHHTT
T ss_pred CCC--CCCeEEEECCCCHHHcCCceEEEecCCCceEEEEEE-EEECc-EE--e-ccccEEEcCCCCeEecCHHHHHHHHH
Confidence 862 348999999999999999999999999999999999 99999 33 3 56789999999999999999999999
Q ss_pred HhCCccccccccchhhcchhHHHHHHhhcccCcccccccccccccCCCCcccccccccccccCCCCCCCCCcccCchhHH
Q 011141 314 AIGATGIVSQECKAVVSQYGEEIINMLLAKDEPQKICSQIGLCTFDGSRGVSMGIESVVPENNHRASGGFHDAMCSTCEM 393 (492)
Q Consensus 314 ~i~~~~~~~~~C~~~~~~y~~~~~~~~~~~~~~~~~c~~~~~C~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~c~~~~~ 393 (492)
++++.
T Consensus 357 ~i~~~--------------------------------------------------------------------------- 361 (453)
T 2bju_A 357 NLDVI--------------------------------------------------------------------------- 361 (453)
T ss_dssp TSSCE---------------------------------------------------------------------------
T ss_pred HhCCc---------------------------------------------------------------------------
Confidence 88764
Q ss_pred HHHHHHHHHhhhchHHHHHHHHHhhcccCCCCCC-ceeeeCccCCCCCcEEEEECCEEEeeCcCcceEEeCcCCcceeee
Q 011141 394 AVVWMQNQLKQNQTQERILNYVNELCDRLPSPMG-ESAVDCSRLSSLPIVSFTIGGKIFDLTPDQYILKVGEGDAAQCIS 472 (492)
Q Consensus 394 ~~~~~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~-~~~~~c~~~~~~p~~~f~~~~~~~~l~~~~y~~~~~~~~~~~C~~ 472 (492)
+...| .|.++|+. ..+|+|+|+|+|+.++|+|++|+++....+...|++
T Consensus 362 -----------------------------~~~~g~~~~v~C~~-~~~P~itf~fgg~~~~l~~~~yi~~~~~~g~~~C~~ 411 (453)
T 2bju_A 362 -----------------------------KVPFLPFYVTLCNN-SKLPTFEFTSENGKYTLEPEYYLQHIEDVGPGLCML 411 (453)
T ss_dssp -----------------------------ECTTSSCEEEETTC-TTCCCEEEECSSCEEEECHHHHEEECTTTSTTEEEE
T ss_pred -----------------------------ccCCCceEEEecCC-CCCCcEEEEECCEEEEECHHHhEeecccCCCceEEE
Confidence 11245 78999997 789999999999999999999999875434468999
Q ss_pred ceeecccCCCCCCeEEEcCC
Q 011141 473 GFSALDVAPPRGPLWYVYSC 492 (492)
Q Consensus 473 ~~~~~~~~~~~~~~~ilg~~ 492 (492)
+|++.+.+ .+.|||||+
T Consensus 412 ~~~~~~~~---~~~~ILGd~ 428 (453)
T 2bju_A 412 NIIGLDFP---VPTFILGDP 428 (453)
T ss_dssp CEEECCCS---SCEEEECHH
T ss_pred EEEeCCCC---CCCEEECHH
Confidence 99987742 358999984
No 14
>1yg9_A Aspartic protease BLA G 2; allegren, hydrolase, allergen; HET: NAG; 1.30A {Blattella germanica} PDB: 2nr6_A* 3liz_A*
Probab=100.00 E-value=2.3e-54 Score=436.73 Aligned_cols=296 Identities=30% Similarity=0.509 Sum_probs=263.4
Q ss_pred cceEeceecCCceEEEEEEecCCCceEEEEEeCCCCCeeeeCCCCCCCccc--cCCCCCCCCCCCceeeCCceEEEEecC
Q 011141 77 ADIVALKNYMDAQYFGEIGIGTPPQNFTVIFDTGSSNLWVPSSKCYFSIAC--YFHSKYRSGRSSTYKKNGKSADIHYGT 154 (492)
Q Consensus 77 ~~~~~l~~~~~~~Y~~~i~iGtP~Q~~~v~lDTGSs~~WV~~~~C~~~~~C--~~~~~y~~~~SsT~~~~~~~~~i~Yg~ 154 (492)
...+||.|+.+.+|+++|.|| ||++.|+|||||+++||++..|. ...| ..++.|||++| ||+..++.|.+.|++
T Consensus 6 ~~~~~l~n~~~~~Y~~~i~iG--~Q~~~v~~DTGSs~lWv~~~~C~-~~~C~~~~~~~y~~~~S-T~~~~~~~~~i~Yg~ 81 (330)
T 1yg9_A 6 PLYKLVHVFINTQYAGITKIG--NQNFLTVFDSTSCNVVVASQECV-GGACVCPNLQKYEKLKP-KYISDGNVQVKFFDT 81 (330)
T ss_dssp CSCSCEEEEECTTSEEEEEET--TEEEEEEEETTCCCEEEECTTCC-SGGGGSTTCCCCCCSSC-EEEEEEEEEEEETTT
T ss_pred eeEeeeecCCCCEEEEEEEEC--CEEEEEEEeCCCcceEEecCCCC-CccCcccccCccCCCCC-ceEECCCEEEEEECC
Confidence 345799999999999999999 89999999999999999999996 4579 88899999999 999999999999999
Q ss_pred CeeEeeEEEeEEEECceeecccEEEEEEecCCccccccccceeecCCccccc-CCCCCchHHHHHhcCCCCCCeEEEEec
Q 011141 155 GAISGFFSEDHVKIGDLVVKDQEFIEATREPSLTFLLAKFDGILGLGFQEIS-VGKAVPVWYNMVNQGLVNEPVFSFWFN 233 (492)
Q Consensus 155 gs~~G~~~~D~v~~g~~~v~~~~fg~~~~~~~~~~~~~~~dGIlGLg~~~~s-~~~~~~~~~~L~~qg~I~~~~FSl~l~ 233 (492)
|+++|.+++|+|++|+.+++++.||++... +..|....++||||||++..+ .....|++++|++||+| +++||+||.
T Consensus 82 Gs~~G~~~~Dtv~ig~~~~~~~~fg~~~~~-~~~f~~~~~~GilGLg~~~~s~~~~~~~~~~~l~~qg~i-~~~FS~~l~ 159 (330)
T 1yg9_A 82 GSAVGRGIEDSLTISQLTTSQQDIVLADEL-SQEVCILSADVVVGIAAPGCPNALKGKTVLENFVEENLI-APVFSIHHA 159 (330)
T ss_dssp EEEEEEEEEEEEEETTEEEEEEEEEEEEEE-CTHHHHTTCSEEEECSCTTSCCTTSCCCHHHHHHHTTSS-CSEEEEEEE
T ss_pred ceEEEEEEEEEEEECCEEEcCeEEEEEEEc-ccccccccCceEEEcCcchhccccCCCCHHHHHHhcCCC-CceEEEEEc
Confidence 999999999999999999999999999977 444555678999999999887 66788899999999999 999999998
Q ss_pred CCCCCCCCcEEEeCcccCCCCcccceEEeccCccceEEEeceEEEcCccccccCCCceEEEcCCCCceeccHHHHHHHHH
Q 011141 234 RNADEEEGGEIVFGGMDPDHYKGEHTYVPVTQKGYWQFDMGDVMIDGQTTGFCAGGCAAIADSGTSLLAGPTTIITQVNH 313 (492)
Q Consensus 234 ~~~~~~~~G~L~fGgiD~~~~~g~l~~~p~~~~~~w~v~l~~i~vg~~~~~~~~~~~~aiiDTGtt~i~lP~~~~~~l~~ 313 (492)
+..+....|+|+|||+|+++|.|++.|+|+...++|.|.+++|+|+++.+. ..+..++|||||+++++|.+++++|++
T Consensus 160 ~~~~~~~~G~l~fGg~d~~~~~g~l~~~p~~~~~~w~v~l~~i~v~~~~~~--~~~~~aiiDSGTs~~~lP~~~~~~l~~ 237 (330)
T 1yg9_A 160 RFQDGEHFGEIIFGGSDWKYVDGEFTYVPLVGDDSWKFRLDGVKIGDTTVA--PAGTQAIIDTSKAIIVGPKAYVNPINE 237 (330)
T ss_dssp ECTTSCEEEEEEETSCCGGGEEEEEEEEEBSCTTSCCEECSEEEETTEEEE--CTTCEEEECTTCSSEEEEHHHHHHHHH
T ss_pred CCCCCCCCCEEEECCcCHHHccCceEEEECCCCCEEEEEeCeEEECCEEEc--CCCcEEEEecCCccccCCHHHHHHHHH
Confidence 864333479999999999999999999999999999999999999998753 467889999999999999999999999
Q ss_pred HhCCccccccccchhhcchhHHHHHHhhcccCcccccccccccccCCCCcccccccccccccCCCCCCCCCcccCchhHH
Q 011141 314 AIGATGIVSQECKAVVSQYGEEIINMLLAKDEPQKICSQIGLCTFDGSRGVSMGIESVVPENNHRASGGFHDAMCSTCEM 393 (492)
Q Consensus 314 ~i~~~~~~~~~C~~~~~~y~~~~~~~~~~~~~~~~~c~~~~~C~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~c~~~~~ 393 (492)
++++..
T Consensus 238 ~~~~~~-------------------------------------------------------------------------- 243 (330)
T 1yg9_A 238 AIGCVV-------------------------------------------------------------------------- 243 (330)
T ss_dssp HHTCEE--------------------------------------------------------------------------
T ss_pred HhCCcc--------------------------------------------------------------------------
Confidence 997751
Q ss_pred HHHHHHHHHhhhchHHHHHHHHHhhcccCCCCCC--ce-eeeCccCCCCCcEEEEECCEEEeeCcCcceEEeCcCCccee
Q 011141 394 AVVWMQNQLKQNQTQERILNYVNELCDRLPSPMG--ES-AVDCSRLSSLPIVSFTIGGKIFDLTPDQYILKVGEGDAAQC 470 (492)
Q Consensus 394 ~~~~~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~--~~-~~~c~~~~~~p~~~f~~~~~~~~l~~~~y~~~~~~~~~~~C 470 (492)
...| .| .++|+.+..+|+|+|+|+|+.|+|+|++|+++. ...|
T Consensus 244 ------------------------------~~~g~~~~~~~~C~~~~~~p~i~f~fgg~~~~l~~~~y~~~~----~~~C 289 (330)
T 1yg9_A 244 ------------------------------EKTTTRRICKLDCSKIPSLPDVTFVINGRNFNISSQYYIQQN----GNLC 289 (330)
T ss_dssp ------------------------------EECSSCEEEEECGGGGGGSCCEEEEETTEEEEECHHHHEEEE----TTEE
T ss_pred ------------------------------cCCCceEEEEEECCCccccCcEEEEECCEEEEECHHHhcccC----CCcE
Confidence 0134 68 899998888999999999999999999999987 2579
Q ss_pred eeceeecccCCCCCCeEEEcCC
Q 011141 471 ISGFSALDVAPPRGPLWYVYSC 492 (492)
Q Consensus 471 ~~~~~~~~~~~~~~~~~ilg~~ 492 (492)
+++|++.. .++.|||||+
T Consensus 290 ~~~i~~~~----~~~~~ilG~~ 307 (330)
T 1yg9_A 290 YSGFQPCG----HSDHFFIGDF 307 (330)
T ss_dssp EESEEEET----TCSSEEECHH
T ss_pred EEEEEeCC----CCCeEEecHH
Confidence 99998762 4568999974
No 15
>1mpp_A Pepsin; hydrolase(acid proteinase); 2.00A {Rhizomucor pusillus} SCOP: b.50.1.2 PDB: 2asi_A* 2rmp_A*
Probab=100.00 E-value=2.2e-54 Score=442.36 Aligned_cols=304 Identities=27% Similarity=0.463 Sum_probs=266.8
Q ss_pred CcceEeceecCCceEEEEEEecCCCceEEEEEeCCCCCeeeeCCCCCCCccccCCCCCCCCCCCceeeCCceEEEEecCC
Q 011141 76 DADIVALKNYMDAQYFGEIGIGTPPQNFTVIFDTGSSNLWVPSSKCYFSIACYFHSKYRSGRSSTYKKNGKSADIHYGTG 155 (492)
Q Consensus 76 ~~~~~~l~~~~~~~Y~~~i~iGtP~Q~~~v~lDTGSs~~WV~~~~C~~~~~C~~~~~y~~~~SsT~~~~~~~~~i~Yg~g 155 (492)
....+||.|+.+.+|+++|.||||+|++.|+|||||+++||+|..|.....|..++.|+|++|+||+..++.|.+.|++|
T Consensus 6 ~~~~~~l~~~~~~~Y~~~i~iGtP~q~~~v~~DTGSs~~Wv~~~~C~~~~~C~~~~~y~~~~SsT~~~~~~~~~i~Yg~G 85 (361)
T 1mpp_A 6 SVDTPGLYDFDLEEYAIPVSIGTPGQDFYLLFDTGSSDTWVPHKGCDNSEGCVGKRFFDPSSSSTFKETDYNLNITYGTG 85 (361)
T ss_dssp CEEEEEEEETTTTEEEEEEEETTTTEEEEEEEETTCCCCEEEBTTCCGGGTCCSSCCBCGGGCTTCEEEEEEEEEECSSC
T ss_pred ccceEEeecCCCCEEEEEEEECCCCcEEEEEEcCCCCCeEECCCCCCCCccCCCCCcCCCccCCceEecCCeEEEEECCc
Confidence 45668999999999999999999999999999999999999999994224799899999999999999999999999999
Q ss_pred eeEeeEEEeEEEECceeecccEEEEEEecCC-----ccccccccceeecCCcccccCCC------CCchHHHHHhcCCCC
Q 011141 156 AISGFFSEDHVKIGDLVVKDQEFIEATREPS-----LTFLLAKFDGILGLGFQEISVGK------AVPVWYNMVNQGLVN 224 (492)
Q Consensus 156 s~~G~~~~D~v~~g~~~v~~~~fg~~~~~~~-----~~~~~~~~dGIlGLg~~~~s~~~------~~~~~~~L~~qg~I~ 224 (492)
+++|.+++|+|+|++.+++++.||++....+ ..|....++||||||++..+... ..+++++|++||+|+
T Consensus 86 s~~G~~~~D~v~~g~~~v~~~~fg~~~~~~~~~~~~~~~~~~~~~GilGLg~~~~s~~~~~~~~~~~~~~~~l~~~g~i~ 165 (361)
T 1mpp_A 86 GANGIYFRDSITVGGATVKQQTLAYVDNVSGPTAEQSPDSELFLDGIFGAAYPDNTAMEAEYGDTYNTVHVNLYKQGLIS 165 (361)
T ss_dssp EEEEEEEEEEEEETTEEEEEEEEEEEEEEESGGGSSCTTCSSCCCEEEECSCGGGSHHHHHHSCCCCCHHHHHHHTTSSS
T ss_pred eEEEEEEEEEEEECCEEEeceEEEEEEeccCccccccccccCCCCCEEEeCCcccccccccccccCCCHHHHHHHcCCCC
Confidence 9999999999999999999999999998755 34555678999999998877544 788999999999999
Q ss_pred CCeEEEEecCCCCCCCCcEEEeCcccCCCCcccceEEeccCcc----ceEEEeceEEEcCccccccCCCceEE-EcCCCC
Q 011141 225 EPVFSFWFNRNADEEEGGEIVFGGMDPDHYKGEHTYVPVTQKG----YWQFDMGDVMIDGQTTGFCAGGCAAI-ADSGTS 299 (492)
Q Consensus 225 ~~~FSl~l~~~~~~~~~G~L~fGgiD~~~~~g~l~~~p~~~~~----~w~v~l~~i~vg~~~~~~~~~~~~ai-iDTGtt 299 (492)
+++||+||.+. ...|.|+|||+|+++|.|++.|+|+.... +|.|.+++|+|+++.+. +..+..++ |||||+
T Consensus 166 ~~~FS~~l~~~---~~~G~l~fGg~d~~~~~g~l~~~p~~~~~~~~~~~~v~l~~i~v~~~~~~-~~~~~~ai~iDSGTt 241 (361)
T 1mpp_A 166 SPVFSVYMNTN---DGGGQVVFGGVNNTLLGGDIQYTDVLKSRGGYFFWDAPVTGVKIDGSDAV-SFDGAQAFTIDTGTN 241 (361)
T ss_dssp SSEEEEECCCS---SSEEEEEESSCCGGGBSSCCEEEECEEETTEEEEEEEEEEEEEETTEEEE-EEEEEEEEEEETTCC
T ss_pred CcEEEEEecCC---CCCcEEEEecCChhhcCCceEEEEcccCCCceeEEEEEEeEEEECCeeec-cCCCCEEEEECCCCC
Confidence 99999999885 23799999999999999999999998765 99999999999998764 33567899 999999
Q ss_pred ceeccHHHHHHHHHHhCCccccccccchhhcchhHHHHHHhhcccCcccccccccccccCCCCcccccccccccccCCCC
Q 011141 300 LLAGPTTIITQVNHAIGATGIVSQECKAVVSQYGEEIINMLLAKDEPQKICSQIGLCTFDGSRGVSMGIESVVPENNHRA 379 (492)
Q Consensus 300 ~i~lP~~~~~~l~~~i~~~~~~~~~C~~~~~~y~~~~~~~~~~~~~~~~~c~~~~~C~~~~~~~~~~~~~~~~~~~~~~~ 379 (492)
++++|.+++++|++++++..
T Consensus 242 ~~~lP~~~~~~l~~~~~~~~------------------------------------------------------------ 261 (361)
T 1mpp_A 242 FFIAPSSFAEKVVKAALPDA------------------------------------------------------------ 261 (361)
T ss_dssp SEEEEHHHHHHHHHHHCTTC------------------------------------------------------------
T ss_pred ceeCCHHHHHHHHHHhCCcc------------------------------------------------------------
Confidence 99999999999999997751
Q ss_pred CCCCCcccCchhHHHHHHHHHHHhhhchHHHHHHHHHhhcccCCCCCCceeeeCccCCCC-CcEEEEE--C-----CEEE
Q 011141 380 SGGFHDAMCSTCEMAVVWMQNQLKQNQTQERILNYVNELCDRLPSPMGESAVDCSRLSSL-PIVSFTI--G-----GKIF 451 (492)
Q Consensus 380 ~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~c~~~~~~-p~~~f~~--~-----~~~~ 451 (492)
+...|.|.++|+.+..+ |+|+|+| + |+.|
T Consensus 262 -------------------------------------------~~~~g~~~~~C~~~~~~~p~i~f~f~~g~~~~~g~~~ 298 (361)
T 1mpp_A 262 -------------------------------------------TESQQGYTVPCSKYQDSKTTFSLVLQKSGSSSDTIDV 298 (361)
T ss_dssp -------------------------------------------EEETTEEEEEHHHHTTCCCEEEEEEECTTCSSCEEEE
T ss_pred -------------------------------------------cCCCCcEEEECCCcccCCCcEEEEEEcCCcCCCCeEE
Confidence 11256789999988888 9999999 8 8999
Q ss_pred eeCcCcceEEeCcCCcceeeeceeecccCCCCCCeEEEcCC
Q 011141 452 DLTPDQYILKVGEGDAAQCISGFSALDVAPPRGPLWYVYSC 492 (492)
Q Consensus 452 ~l~~~~y~~~~~~~~~~~C~~~~~~~~~~~~~~~~~ilg~~ 492 (492)
+|+|++|+++... +...|+++|++. .++.||||++
T Consensus 299 ~i~~~~y~~~~~~-~~~~C~~~i~~~-----~~~~~iLG~~ 333 (361)
T 1mpp_A 299 SVPISKMLLPVDK-SGETCMFIVLPD-----GGNQFIVGNL 333 (361)
T ss_dssp EEEGGGGEEECSS-SSCEEEESEEEE-----SSSCCEEEHH
T ss_pred EECHHHhEEecCC-CCCeeEEEEEeC-----CCCCEEEChH
Confidence 9999999998653 335799999876 2467999973
No 16
>3c9x_A Trichoderma reesei aspartic protease; aspartic proteinase, aspartyl protease, hydrolase; 1.70A {Trichoderma reesei} PDB: 3c9y_A* 3emy_A*
Probab=100.00 E-value=5.1e-52 Score=419.48 Aligned_cols=292 Identities=28% Similarity=0.433 Sum_probs=250.7
Q ss_pred ecCCceEEEEEEecCCCceEEEEEeCCCCCeeeeCCCCCCCccccCCCCCCCCCCCceee-CCceEEEEecCCe-eEeeE
Q 011141 84 NYMDAQYFGEIGIGTPPQNFTVIFDTGSSNLWVPSSKCYFSIACYFHSKYRSGRSSTYKK-NGKSADIHYGTGA-ISGFF 161 (492)
Q Consensus 84 ~~~~~~Y~~~i~iGtP~Q~~~v~lDTGSs~~WV~~~~C~~~~~C~~~~~y~~~~SsT~~~-~~~~~~i~Yg~gs-~~G~~ 161 (492)
.+.+.+|+++|.||||+|+|.|+|||||+++||+|..|. ...|..++.|+|++|+||+. .++.|.+.|++|+ ++|.+
T Consensus 11 ~~~~~~Y~~~i~iGTP~Q~~~v~~DTGSs~lWv~~~~C~-~~~~~~~~~y~~~~SsT~~~~~~~~~~i~Yg~Gs~~~G~~ 89 (329)
T 3c9x_A 11 DSADSEYITSVSIGTPAQVLPLDFDTGSSDLWVFSSETP-KSSATGHAIYTPSKSSTSKKVSGASWSISYGDGSSSSGDV 89 (329)
T ss_dssp STTCCCEEEEEEETTTTEEEEEEEETTCCCEEECBTTSC-HHHHTTSCCBCGGGCTTCEECTTCBEEEECTTSCEEEEEE
T ss_pred CCCCCEEEEEEEECCCCeEEEEEEcCCCCCeEEecCCCC-ccccCCCCcCCcccCcCceEcCCCeEEEEeCCCCcEEEEE
Confidence 345788999999999999999999999999999999996 34567789999999999998 6899999999998 89999
Q ss_pred EEeEEEECceeecccEEEEEEecCCccccccccceeecCCcccccC---CCCCchHHHHHhcCCCCCCeEEEEecCCCCC
Q 011141 162 SEDHVKIGDLVVKDQEFIEATREPSLTFLLAKFDGILGLGFQEISV---GKAVPVWYNMVNQGLVNEPVFSFWFNRNADE 238 (492)
Q Consensus 162 ~~D~v~~g~~~v~~~~fg~~~~~~~~~~~~~~~dGIlGLg~~~~s~---~~~~~~~~~L~~qg~I~~~~FSl~l~~~~~~ 238 (492)
++|+|+||+.+++++.||++....+..+....++||||||++..+. ....+++++|+++ |++++||+||.+.
T Consensus 90 ~~D~v~ig~~~v~~~~fg~~~~~~~~~~~~~~~~GilGLg~~~~s~~~~~~~~~~~~~l~~~--i~~~~FS~~l~~~--- 164 (329)
T 3c9x_A 90 YTDKVTIGGFSVNTQGVESATRVSTEFVQDTVISGLVGLAFDSGNQVRPHPQKTWFSNAASS--LAEPLFTADLRHG--- 164 (329)
T ss_dssp EEEEEEETTEEEEEEEEEEEEEECHHHHHCTTCCEEEECSCGGGCCCBSSCCCCHHHHHHTT--SSSSEEEEECCSS---
T ss_pred EEEEEEECCEEEcceEEEEEEecCccccccCCCceeEEeCcccccccCCCCCCCHHHHHHHh--cCCCEEEEEecCC---
Confidence 9999999999999999999997654333335789999999988764 3467899999986 8899999999874
Q ss_pred CCCcEEEeCcccCCCCcccceEEecc-CccceEEEeceEEEcCccccccCCCceEEEcCCCCceeccHHHHHHHHHHhCC
Q 011141 239 EEGGEIVFGGMDPDHYKGEHTYVPVT-QKGYWQFDMGDVMIDGQTTGFCAGGCAAIADSGTSLLAGPTTIITQVNHAIGA 317 (492)
Q Consensus 239 ~~~G~L~fGgiD~~~~~g~l~~~p~~-~~~~w~v~l~~i~vg~~~~~~~~~~~~aiiDTGtt~i~lP~~~~~~l~~~i~~ 317 (492)
..|+|+|||+|+++|.|++.|+|+. ..++|.|.+++|+|+++.+ +..+..++|||||+++++|.+++++|++++.+
T Consensus 165 -~~G~l~fGg~d~~~~~g~l~~~p~~~~~~~~~v~l~~i~v~~~~~--~~~~~~aiiDSGTt~~~lp~~~~~~i~~~i~~ 241 (329)
T 3c9x_A 165 -QNGSYNFGYIDTSVAKGPVAYTPVDNSQGFWEFTASGYSVGGGKL--NRNSIDGIADTGTTLLLLDDNVVDAYYANVQS 241 (329)
T ss_dssp -SCEEEEESSCCGGGCSSCEEEEECBCTTSSCEEEECCEEETTCCC--CSCCEEEEECTTCCSEEECHHHHHHHHTTCTT
T ss_pred -CCcEEEEeCcChhhcccceEEEEccCCCceEEEEEeeEEECCEec--cCCCceEEEECCCCcEeCCHHHHHHHHHhCCC
Confidence 2799999999999999999999997 5789999999999999865 35678999999999999999999999998844
Q ss_pred ccccccccchhhcchhHHHHHHhhcccCcccccccccccccCCCCcccccccccccccCCCCCCCCCcccCchhHHHHHH
Q 011141 318 TGIVSQECKAVVSQYGEEIINMLLAKDEPQKICSQIGLCTFDGSRGVSMGIESVVPENNHRASGGFHDAMCSTCEMAVVW 397 (492)
Q Consensus 318 ~~~~~~~C~~~~~~y~~~~~~~~~~~~~~~~~c~~~~~C~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~~ 397 (492)
...
T Consensus 242 a~~----------------------------------------------------------------------------- 244 (329)
T 3c9x_A 242 AQY----------------------------------------------------------------------------- 244 (329)
T ss_dssp CEE-----------------------------------------------------------------------------
T ss_pred cEE-----------------------------------------------------------------------------
Confidence 310
Q ss_pred HHHHHhhhchHHHHHHHHHhhcccCCCCCCceeeeCccCCCCCcEEEEECCEEEeeCcCcceEEeCcCCcceeeeceeec
Q 011141 398 MQNQLKQNQTQERILNYVNELCDRLPSPMGESAVDCSRLSSLPIVSFTIGGKIFDLTPDQYILKVGEGDAAQCISGFSAL 477 (492)
Q Consensus 398 ~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~c~~~~~~p~~~f~~~~~~~~l~~~~y~~~~~~~~~~~C~~~~~~~ 477 (492)
....+.|.++|+. .+|+|+|+|+|+.+.|++++|+++..+.+...|+++|+..
T Consensus 245 -------------------------~~~~~~~~~~C~~--~~P~i~f~f~g~~~~ip~~~~~~~~~~~~~~~C~~~i~~~ 297 (329)
T 3c9x_A 245 -------------------------DNQQEGVVFDCDE--DLPSFSFGVGSSTITIPGDLLNLTPLEEGSSTCFGGLQSS 297 (329)
T ss_dssp -------------------------ETTTTEEEEETTC--CCCCEEEEETTEEEEECGGGGEEEESSTTCSEEEESEEEC
T ss_pred -------------------------cCCCCEEEEECCC--CCCcEEEEECCEEEEECHHHeeeeccCCCCCeEEEEEEcC
Confidence 1125678899994 8999999999999999999999886443346899999876
Q ss_pred ccCCCCCCeEEEcCC
Q 011141 478 DVAPPRGPLWYVYSC 492 (492)
Q Consensus 478 ~~~~~~~~~~ilg~~ 492 (492)
+ .++.|||||+
T Consensus 298 ~----~~~~~ILG~~ 308 (329)
T 3c9x_A 298 S----GIGINIFGDV 308 (329)
T ss_dssp T----TTTSEEECHH
T ss_pred C----CCCcEEEChH
Confidence 4 3468999973
No 17
>1oew_A Endothiapepsin; hydrolase, aspartic proteinase mechanism, atomic resolution, succinimide, anisotropic refinement; HET: SUI; 0.9A {Cryphonectria parasitica} SCOP: b.50.1.2 PDB: 1gkt_A* 1gvt_A* 1gvv_A* 1gvw_A* 1gvx_A* 1gvu_A* 1oex_A* 2jji_A* 2jjj_A* 2vs2_A* 3uri_A* 3urj_A* 3url_A* 3pww_A* 1e80_E* 1e81_E* 1e82_E* 1e5o_E* 1eed_P* 1epl_E* ...
Probab=100.00 E-value=5.7e-52 Score=419.13 Aligned_cols=289 Identities=27% Similarity=0.440 Sum_probs=247.6
Q ss_pred CCceEEEEEEecCCCceEEEEEeCCCCCeeeeCCCCCCCccccCCCCCCCCCCCceee-CCceEEEEecCCe-eEeeEEE
Q 011141 86 MDAQYFGEIGIGTPPQNFTVIFDTGSSNLWVPSSKCYFSIACYFHSKYRSGRSSTYKK-NGKSADIHYGTGA-ISGFFSE 163 (492)
Q Consensus 86 ~~~~Y~~~i~iGtP~Q~~~v~lDTGSs~~WV~~~~C~~~~~C~~~~~y~~~~SsT~~~-~~~~~~i~Yg~gs-~~G~~~~ 163 (492)
.+.+|+++|.||||+|++.|+|||||+++||+|..|. ...| .++.|+|++|+||+. .++.|.+.|++|+ ++|.+++
T Consensus 13 ~~~~Y~~~i~iGTP~Q~~~v~~DTGSs~lWv~~~~C~-~~~~-~~~~y~~~~SsT~~~~~~~~~~i~Yg~Gs~~~G~~~~ 90 (329)
T 1oew_A 13 LDDAYITPVQIGTPAQTLNLDFDTGSSDLWVFSSETT-ASEV-XQTIYTPSKSTTAKLLSGATWSISYGDGSSSSGDVYT 90 (329)
T ss_dssp TCCCEEEEEEETTTTEEEEEEEETTCCCEEECBTTSC-GGGC--CCCBCGGGCTTCEEEEEEEEEEECTTSCEEEEEEEE
T ss_pred CCCEEEEEEEECCCCeEEEEEECCCCCCeEEecCCCC-cccc-ccCccCCccCccceecCCCeEEEEeCCCCcEEEEEEE
Confidence 5788999999999999999999999999999999996 3456 788999999999998 6889999999998 8999999
Q ss_pred eEEEECceeecccEEEEEEecCCccccccccceeecCCcccccC---CCCCchHHHHHhcCCCCCCeEEEEecCCCCCCC
Q 011141 164 DHVKIGDLVVKDQEFIEATREPSLTFLLAKFDGILGLGFQEISV---GKAVPVWYNMVNQGLVNEPVFSFWFNRNADEEE 240 (492)
Q Consensus 164 D~v~~g~~~v~~~~fg~~~~~~~~~~~~~~~dGIlGLg~~~~s~---~~~~~~~~~L~~qg~I~~~~FSl~l~~~~~~~~ 240 (492)
|+|+||+..++++.||++....+..+....++||||||++..+. ....+++++|++| |++++||+||.+. .
T Consensus 91 D~v~~g~~~v~~~~fg~~~~~~~~~~~~~~~~GilGLg~~~~s~~~~~~~~~~~~~l~~~--i~~~~FS~~L~~~----~ 164 (329)
T 1oew_A 91 DTVSVGGLTVTGQAVESAKKVSSSFTEDSTIDGLLGLAFSTLNTVSPTQQKTFFDNAKAS--LDSPVFTADLGYH----A 164 (329)
T ss_dssp EEEEETTEEEEEEEEEEEEEECHHHHHCTTCCEEEECSCGGGCCCBSSCCCCHHHHHTTT--SSSSEEEEECCSS----S
T ss_pred EEEEECCEEEeeeEEEEEEecCccccccCCCceEEEeccccccccCcCCCCCHHHHHHHh--ccCcEEEEEccCC----C
Confidence 99999999999999999997654333335789999999988764 3467899999987 8899999999874 2
Q ss_pred CcEEEeCcccCCCCcccceEEecc-CccceEEEeceEEEcCccccccCCCceEEEcCCCCceeccHHHHHHHHHHhCCcc
Q 011141 241 GGEIVFGGMDPDHYKGEHTYVPVT-QKGYWQFDMGDVMIDGQTTGFCAGGCAAIADSGTSLLAGPTTIITQVNHAIGATG 319 (492)
Q Consensus 241 ~G~L~fGgiD~~~~~g~l~~~p~~-~~~~w~v~l~~i~vg~~~~~~~~~~~~aiiDTGtt~i~lP~~~~~~l~~~i~~~~ 319 (492)
.|+|+|||+|+++|.|++.|+|+. ..++|.|.+++|+|+++.+. ..+..++|||||+++++|.+++++|++++.+..
T Consensus 165 ~G~l~fGg~d~~~~~g~l~~~p~~~~~~~~~v~l~~i~v~~~~~~--~~~~~aiiDSGTt~~~lP~~~~~~l~~~i~~a~ 242 (329)
T 1oew_A 165 PGTYNFGFIDTTAYTGSITYTAVSTKQGFWEWTSTGYAVGSGTFK--STSIDGIADTGTTLLYLPATVVSAYWAQVSGAK 242 (329)
T ss_dssp CEEEEESCCCTTSSSSCCEEEECBCTTSSCEEEEEEEEETTSCCE--EEEEEEEECTTCCSEEECHHHHHHHHTTSTTCE
T ss_pred CeEEEEeccChHhcccceEEEEccCCCceEEEEEeeEEECCeecc--CCCceEEEeCCCCCEECCHHHHHHHHHhCCCcE
Confidence 799999999999999999999997 57899999999999998653 456789999999999999999999999884431
Q ss_pred ccccccchhhcchhHHHHHHhhcccCcccccccccccccCCCCcccccccccccccCCCCCCCCCcccCchhHHHHHHHH
Q 011141 320 IVSQECKAVVSQYGEEIINMLLAKDEPQKICSQIGLCTFDGSRGVSMGIESVVPENNHRASGGFHDAMCSTCEMAVVWMQ 399 (492)
Q Consensus 320 ~~~~~C~~~~~~y~~~~~~~~~~~~~~~~~c~~~~~C~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~ 399 (492)
.
T Consensus 243 ~------------------------------------------------------------------------------- 243 (329)
T 1oew_A 243 S------------------------------------------------------------------------------- 243 (329)
T ss_dssp E-------------------------------------------------------------------------------
T ss_pred E-------------------------------------------------------------------------------
Confidence 0
Q ss_pred HHHhhhchHHHHHHHHHhhcccCCCCCCceeeeCccCCCCCcEEEEECCEEEeeCcCcceEEeCcCCcceeeeceeeccc
Q 011141 400 NQLKQNQTQERILNYVNELCDRLPSPMGESAVDCSRLSSLPIVSFTIGGKIFDLTPDQYILKVGEGDAAQCISGFSALDV 479 (492)
Q Consensus 400 ~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~c~~~~~~p~~~f~~~~~~~~l~~~~y~~~~~~~~~~~C~~~~~~~~~ 479 (492)
....+.|.++|+. .+|+|+|+|+|+.++|++++|+++..+.+...|+++|+..+
T Consensus 244 -----------------------~~~~g~~~~~C~~--~~P~i~f~fgg~~~~ip~~~~~~~~~~~~~~~C~~~i~~~~- 297 (329)
T 1oew_A 244 -----------------------SSSVGGYVFPCSA--TLPSFTFGVGSARIVIPGDYIDFGPISTGSSSCFGGIQSSA- 297 (329)
T ss_dssp -----------------------ETTTTEEEEETTC--CCCCEEEEETTEEEEECHHHHEEEESSTTCSEEEESEEEST-
T ss_pred -----------------------cCCCCEEEEECCC--CCCcEEEEECCEEEEECHHHeeeeecCCCCCeEEEEEEeCC-
Confidence 1125678899994 89999999999999999999998764433468999998764
Q ss_pred CCCCCCeEEEcCC
Q 011141 480 APPRGPLWYVYSC 492 (492)
Q Consensus 480 ~~~~~~~~ilg~~ 492 (492)
.++.|||||+
T Consensus 298 ---~~~~~iLG~~ 307 (329)
T 1oew_A 298 ---GIGINIFGDV 307 (329)
T ss_dssp ---TTSSEEECHH
T ss_pred ---CCCceEEChH
Confidence 3468999973
No 18
>2apr_A Rhizopuspepsin; hydrolase (aspartic proteinase); 1.80A {Rhizopus microsporus var} SCOP: b.50.1.2 PDB: 3apr_E* 4apr_E* 5apr_E* 6apr_E* 1uh9_A 1uh8_A 1uh7_A
Probab=100.00 E-value=1.2e-51 Score=416.19 Aligned_cols=289 Identities=33% Similarity=0.634 Sum_probs=250.6
Q ss_pred ecCCceEEEEEEecCCCceEEEEEeCCCCCeeeeCCCCCCCccccCCCCCCCCCCCceeeCCceEEEEecCCe-eEeeEE
Q 011141 84 NYMDAQYFGEIGIGTPPQNFTVIFDTGSSNLWVPSSKCYFSIACYFHSKYRSGRSSTYKKNGKSADIHYGTGA-ISGFFS 162 (492)
Q Consensus 84 ~~~~~~Y~~~i~iGtP~Q~~~v~lDTGSs~~WV~~~~C~~~~~C~~~~~y~~~~SsT~~~~~~~~~i~Yg~gs-~~G~~~ 162 (492)
+..+.+|+++|.||||+|++.|+|||||+++||++..|..+ |..++.|+|++|+||+..++.|.+.|++|+ ++|.++
T Consensus 11 ~~~~~~Y~~~i~iGTP~q~~~v~~DTGSs~lWv~~~~c~~c--~~~~~~y~~~~SsT~~~~~~~~~i~Yg~Gs~~~G~~~ 88 (325)
T 2apr_A 11 YGNDIEYYGQVTIGTPGKKFNLDFDTGSSDLWIASTLCTNC--GSGQTKYDPNQSSTYQADGRTWSISYGDGSSASGILA 88 (325)
T ss_dssp ETTTTEEEEEEEETTTTEEEEEEEETTCCCCEEEBTTCSSC--CTTSCCBCGGGCTTCEEEEEEEEEECTTSCEEEEEEE
T ss_pred cCCCCEEEEEEEECCCCeEEEEEEcCCCCCEEEccCCCchH--hcCCCCCCcccCCCeeeCCCEEEEEECCCCCEEEEEE
Confidence 45688999999999999999999999999999999999733 677889999999999999999999999998 899999
Q ss_pred EeEEEECceeecccEEEEEEecCCccccccccceeecCCcccccC-CCCCchHHHHHhcCCCCCCeEEEEecCCCCCCCC
Q 011141 163 EDHVKIGDLVVKDQEFIEATREPSLTFLLAKFDGILGLGFQEISV-GKAVPVWYNMVNQGLVNEPVFSFWFNRNADEEEG 241 (492)
Q Consensus 163 ~D~v~~g~~~v~~~~fg~~~~~~~~~~~~~~~dGIlGLg~~~~s~-~~~~~~~~~L~~qg~I~~~~FSl~l~~~~~~~~~ 241 (492)
+|+|+|++.+++++.||++....+. |....++||||||++..+. ....+++++|++||+|++++||+||.+... ...
T Consensus 89 ~D~v~~g~~~v~~~~fg~~~~~~~~-f~~~~~~GilGLg~~~~s~~~~~~~~~~~l~~qg~i~~~~FS~~l~~~~~-~~~ 166 (325)
T 2apr_A 89 KDNVNLGGLLIKGQTIELAKREAAS-FASGPNDGLLGLGFDTITTVRGVKTPMDNLISQGLISRPIFGVYLGKAKN-GGG 166 (325)
T ss_dssp EEEEEETTEEEEEEEEEEEEEECHH-HHTSSCSEEEECSCGGGCSSTTCCCHHHHHHHTTSCSSSEEEEEECCGGG-TCC
T ss_pred EEEEEECCEEECcEEEEEEeccCcc-cccCCCceEEEeCCcccccccCCCCHHHHHHhcCCCCCceEEEEecCCCC-CCC
Confidence 9999999999999999999876543 5455689999999998764 356789999999999999999999976421 237
Q ss_pred cEEEeCcccCCCCcccceEEecc-CccceEEEeceEEEcCccccccCCCceEEEcCCCCceeccHHHHHHHHHHhCCccc
Q 011141 242 GEIVFGGMDPDHYKGEHTYVPVT-QKGYWQFDMGDVMIDGQTTGFCAGGCAAIADSGTSLLAGPTTIITQVNHAIGATGI 320 (492)
Q Consensus 242 G~L~fGgiD~~~~~g~l~~~p~~-~~~~w~v~l~~i~vg~~~~~~~~~~~~aiiDTGtt~i~lP~~~~~~l~~~i~~~~~ 320 (492)
|+|+|||+|+++|.|++.|+|+. ..++|.|.+++|+||+ . ++.....++|||||+++++|.+++++|.+++.+.-
T Consensus 167 G~l~fGg~d~~~~~g~l~~~p~~~~~~~~~v~l~~i~vg~-~--~~~~~~~~iiDSGTs~~~lP~~~~~~~~~~~~~~~- 242 (325)
T 2apr_A 167 GEYIFGGYDSTKFKGSLTTVPIDNSRGWWGITVDRATVGT-S--TVASSFDGILDTGTTLLILPNNIAASVARAYGASD- 242 (325)
T ss_dssp EEEEETCCCGGGBCSCCEEEECBCTTSSCEEEECEEEETT-E--EEECCEEEEECTTCSSEEEEHHHHHHHHHHHTCEE-
T ss_pred CEEEEccCCchhccCceEEEEccCCCCEEEEEEeEEEECC-E--ecCCCceEEEecCCccEECCHHHHHHHHHHHhccc-
Confidence 99999999999999999999996 4789999999999999 3 34567899999999999999999999999986650
Q ss_pred cccccchhhcchhHHHHHHhhcccCcccccccccccccCCCCcccccccccccccCCCCCCCCCcccCchhHHHHHHHHH
Q 011141 321 VSQECKAVVSQYGEEIINMLLAKDEPQKICSQIGLCTFDGSRGVSMGIESVVPENNHRASGGFHDAMCSTCEMAVVWMQN 400 (492)
Q Consensus 321 ~~~~C~~~~~~y~~~~~~~~~~~~~~~~~c~~~~~C~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~ 400 (492)
T Consensus 243 -------------------------------------------------------------------------------- 242 (325)
T 2apr_A 243 -------------------------------------------------------------------------------- 242 (325)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred HHhhhchHHHHHHHHHhhcccCCCCCCceeeeCccCCCCCcEEEEECCEEEeeCcCcceEEeCcCCcceeeeceeecccC
Q 011141 401 QLKQNQTQERILNYVNELCDRLPSPMGESAVDCSRLSSLPIVSFTIGGKIFDLTPDQYILKVGEGDAAQCISGFSALDVA 480 (492)
Q Consensus 401 ~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~c~~~~~~p~~~f~~~~~~~~l~~~~y~~~~~~~~~~~C~~~~~~~~~~ 480 (492)
+. .+.|.++|+. ..+|+|+|+|+|..+.||+++|+++.. ...|+++|+..+
T Consensus 243 ----------------------~~-~g~~~~~C~~-~~~p~i~f~f~g~~~~ip~~~~~~~~~---~~~C~~~i~~~~-- 293 (325)
T 2apr_A 243 ----------------------NG-DGTYTISCDT-SAFKPLVFSINGASFQVSPDSLVFEEF---QGQCIAGFGYGN-- 293 (325)
T ss_dssp ----------------------CS-SSCEEECSCG-GGCCCEEEEETTEEEEECGGGGEEEEE---TTEEEESEEEES--
T ss_pred ----------------------CC-CCeEEEECCC-CCCCcEEEEECCEEEEECHHHEEEcCC---CCeEEEEEEcCC--
Confidence 11 2568999995 348999999998899999999998754 357999998765
Q ss_pred CCCCCeEEEcCC
Q 011141 481 PPRGPLWYVYSC 492 (492)
Q Consensus 481 ~~~~~~~ilg~~ 492 (492)
++.|||||+
T Consensus 294 ---~~~~iLG~~ 302 (325)
T 2apr_A 294 ---WGFAIIGDT 302 (325)
T ss_dssp ---SSSEEECHH
T ss_pred ---CCCEEECHH
Confidence 357999973
No 19
>3fv3_A SAPP1P-secreted aspartic protease 1; secreted aspartic protease, virulence factor, H; HET: STA; 1.85A {Candida parapsilosis} SCOP: b.50.1.0 PDB: 3tne_A*
Probab=100.00 E-value=2.3e-50 Score=408.98 Aligned_cols=290 Identities=27% Similarity=0.466 Sum_probs=251.1
Q ss_pred ceEeceecCCceEEEEEEecCCCceEEEEEeCCCCCeeeeCCC--CCCCccccCCCCCCCCCCCceeeCCceEEEEecCC
Q 011141 78 DIVALKNYMDAQYFGEIGIGTPPQNFTVIFDTGSSNLWVPSSK--CYFSIACYFHSKYRSGRSSTYKKNGKSADIHYGTG 155 (492)
Q Consensus 78 ~~~~l~~~~~~~Y~~~i~iGtP~Q~~~v~lDTGSs~~WV~~~~--C~~~~~C~~~~~y~~~~SsT~~~~~~~~~i~Yg~g 155 (492)
..+||.+. +.+|+++|.||||||++.|++||||+++||++.. |.....|..++.|+|++|+||+..++.|.+.|++|
T Consensus 3 i~~~l~~~-~~~Y~~~i~iGtP~Q~~~v~~DTGSs~~Wv~~~~~~C~~~~~C~~~~~y~~~~SsT~~~~~~~~~i~Yg~g 81 (339)
T 3fv3_A 3 ISLSLINE-GPSYASKVSVGSNKQQQTVIIDTGSSDFWVVDSNAQCGKGVDCKSSGTFTPSSSSSYKNLGAAFTIRYGDG 81 (339)
T ss_dssp EEEEEEEC-SSSEEEEEEETTTTEEEEEEEETTCCCEEEEEEEEEECTTCCTTTTCCBCGGGCTTCEEEEEEEEEECTTS
T ss_pred eeeEEEcC-CCEEEEEEEEcCCCcEEEEEEeCCCCceEEecCCCCCCCCCCCCCCCcCCCccCcceeeCCceEEEEECCC
Confidence 45788886 5689999999999999999999999999999764 65445799899999999999999999999999999
Q ss_pred -eeEeeEEEeEEEECceeecccEEEEEEecCCccccccccceeecCCcccccC----------CCCCchHHHHHhcCCCC
Q 011141 156 -AISGFFSEDHVKIGDLVVKDQEFIEATREPSLTFLLAKFDGILGLGFQEISV----------GKAVPVWYNMVNQGLVN 224 (492)
Q Consensus 156 -s~~G~~~~D~v~~g~~~v~~~~fg~~~~~~~~~~~~~~~dGIlGLg~~~~s~----------~~~~~~~~~L~~qg~I~ 224 (492)
.++|.+++|+|+||+..++++.||++..... .+||||||++..+. ....+++++|++||+|+
T Consensus 82 s~~~G~~~~D~v~~g~~~v~~~~fg~~~~~~~-------~~GilGLg~~~~~~~~~~~~~~~~~~~~~~~~~L~~~g~i~ 154 (339)
T 3fv3_A 82 STSQGTWGKDTVTINGVSITGQQIADVTQTSV-------DQGILGIGYTSNEAVYDTSGRQTTPNYDNVPVTLKKQGKIR 154 (339)
T ss_dssp CEEEEEEEEEEEEETTEEEEEEEEEEEEEESS-------SSCEEECSCGGGCCCBCTTSCBCSCCCCCHHHHHHHTTSCS
T ss_pred ceEEEEEEEEEEEECCEEECceEEEEEEecCC-------CceeEEecCccccccccccccccCccCCcHHHHHHHCCCCC
Confidence 5899999999999999999999999987653 48999999988753 23456999999999999
Q ss_pred CCeEEEEecCCCCCCCCcEEEeCcccCCCCcccceEEeccCccceEEEeceEEEcCccccccCCCceEEEcCCCCceecc
Q 011141 225 EPVFSFWFNRNADEEEGGEIVFGGMDPDHYKGEHTYVPVTQKGYWQFDMGDVMIDGQTTGFCAGGCAAIADSGTSLLAGP 304 (492)
Q Consensus 225 ~~~FSl~l~~~~~~~~~G~L~fGgiD~~~~~g~l~~~p~~~~~~w~v~l~~i~vg~~~~~~~~~~~~aiiDTGtt~i~lP 304 (492)
+++||+||.+.. ...|+|+|||+|+++|.|++.|+|+..+.+|.|.+++|.|+++.+.. ...++|||||+++++|
T Consensus 155 ~~~fsl~l~~~~--~~~G~l~fGg~d~~~~~g~l~~~p~~~~~~~~v~l~~i~v~g~~~~~---~~~~iiDSGtt~~~lP 229 (339)
T 3fv3_A 155 TNAYSLYLNSPS--AETGTIIFGGVDNAKYSGKLVAEQVTSSQALTISLASVNLKGSSFSF---GDGALLDSGTTLTYFP 229 (339)
T ss_dssp SSEEEEECCCTT--CSEEEEEETEEETTSBSSCCEEEEBCCSSSCEEEEEEEEESSCEEEE---EEEEEECTTBSSEEEC
T ss_pred CceEEEEECCCC--CCCeEEEEeeechHHeecceEEEecccCccEEEEEEEEEECCEeecC---CccEEEeCCCCCEecC
Confidence 999999998763 23799999999999999999999999999999999999999987752 3679999999999999
Q ss_pred HHHHHHHHHHhCCccccccccchhhcchhHHHHHHhhcccCcccccccccccccCCCCcccccccccccccCCCCCCCCC
Q 011141 305 TTIITQVNHAIGATGIVSQECKAVVSQYGEEIINMLLAKDEPQKICSQIGLCTFDGSRGVSMGIESVVPENNHRASGGFH 384 (492)
Q Consensus 305 ~~~~~~l~~~i~~~~~~~~~C~~~~~~y~~~~~~~~~~~~~~~~~c~~~~~C~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 384 (492)
.+++++|++++++...
T Consensus 230 ~~~~~~i~~~~~~~~~---------------------------------------------------------------- 245 (339)
T 3fv3_A 230 SDFAAQLADKAGARLV---------------------------------------------------------------- 245 (339)
T ss_dssp HHHHHHHHHHHTCEEE----------------------------------------------------------------
T ss_pred HHHHHHHHHHcCCEEc----------------------------------------------------------------
Confidence 9999999999987510
Q ss_pred cccCchhHHHHHHHHHHHhhhchHHHHHHHHHhhcccCCCCCCceeeeCccCCCCCcEEEEEC-CEEEeeCcCcceEEeC
Q 011141 385 DAMCSTCEMAVVWMQNQLKQNQTQERILNYVNELCDRLPSPMGESAVDCSRLSSLPIVSFTIG-GKIFDLTPDQYILKVG 463 (492)
Q Consensus 385 ~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~c~~~~~~p~~~f~~~-~~~~~l~~~~y~~~~~ 463 (492)
..+...+.|.++|+. ..+|+|+|+|+ |+.++|++++|+++.+
T Consensus 246 ------------------------------------~~~~~~~~~~~~C~~-~~~p~i~f~f~~g~~~~v~~~~~~~~~~ 288 (339)
T 3fv3_A 246 ------------------------------------QVARDQYLYFIDCNT-DTSGTTVFNFGNGAKITVPNTEYVYQNG 288 (339)
T ss_dssp ------------------------------------EEETTEEEEEECTTC-CCCSEEEEEETTSCEEEEEGGGGEEECS
T ss_pred ------------------------------------cccccCceEEEecCC-CCCCcEEEEECCCCEEEECHHHheeeCC
Confidence 001125678999996 56999999995 8999999999999863
Q ss_pred cCCcceeeeceeecccCCCCCCeEEEcC
Q 011141 464 EGDAAQCISGFSALDVAPPRGPLWYVYS 491 (492)
Q Consensus 464 ~~~~~~C~~~~~~~~~~~~~~~~~ilg~ 491 (492)
+ ..|+++|+. + +.||||+
T Consensus 289 ~---~~C~~~i~~-~------~~~ilG~ 306 (339)
T 3fv3_A 289 D---GTCLWGIQP-S------DDTILGD 306 (339)
T ss_dssp S---SCEEESEEE-C------SSCEECH
T ss_pred C---CeEEEEEEe-C------CcEEeCh
Confidence 3 479999987 1 4699997
No 20
>2qzx_A Candidapepsin-5; aspartic proteinase, aspartyl protease, CL PAIR of basic residues, glycoprotein, protease, secreted; HET: STA; 2.50A {Candida albicans}
Probab=100.00 E-value=3.7e-50 Score=408.05 Aligned_cols=292 Identities=25% Similarity=0.414 Sum_probs=249.5
Q ss_pred ceEeceecCCceEEEEEEecCCCceEEEEEeCCCCCeeeeCC--CCCC------CccccCCCCCCCCCCCceeeCCceEE
Q 011141 78 DIVALKNYMDAQYFGEIGIGTPPQNFTVIFDTGSSNLWVPSS--KCYF------SIACYFHSKYRSGRSSTYKKNGKSAD 149 (492)
Q Consensus 78 ~~~~l~~~~~~~Y~~~i~iGtP~Q~~~v~lDTGSs~~WV~~~--~C~~------~~~C~~~~~y~~~~SsT~~~~~~~~~ 149 (492)
..+||.| .+.+|+++|.||||+|+|.|+|||||+++||++. .|.. ...|..++.|+|++|+||+..++.|.
T Consensus 3 v~~~l~~-~~~~Y~~~i~iGtP~q~~~v~~DTGSs~~Wv~~~~~~C~~~~~~~~~~~C~~~~~y~~~~SsT~~~~~~~~~ 81 (342)
T 2qzx_A 3 VAVTLHN-EAITYTADITVGSDNQKLNVIVDTGSSDLWIPDSNVICIPKWRGDKGDFCKSAGSYSPASSRTSQNLNTRFD 81 (342)
T ss_dssp EEEEEEE-CSSCEEEEEEETTTTEEEEEEEETTCCCEEEEEEEEEECCCSSSCCTTGGGTTCCBCGGGCTTCEEEEEEEE
T ss_pred eeEEEec-CCeEEEEEEEECCCCcEEEEEEeCCCCCeEEecCCCCccCccccCccccccCCCcCCcccCCCcccCCCcEE
Confidence 4578888 4789999999999999999999999999999876 6742 24788899999999999999999999
Q ss_pred EEecCCe-eEeeEEEeEEEECceeecccEEEEEEecCCccccccccceeecCCcccccCC--CCCchHHHHHhcCCCCCC
Q 011141 150 IHYGTGA-ISGFFSEDHVKIGDLVVKDQEFIEATREPSLTFLLAKFDGILGLGFQEISVG--KAVPVWYNMVNQGLVNEP 226 (492)
Q Consensus 150 i~Yg~gs-~~G~~~~D~v~~g~~~v~~~~fg~~~~~~~~~~~~~~~dGIlGLg~~~~s~~--~~~~~~~~L~~qg~I~~~ 226 (492)
+.|++|+ ++|.+++|+|+||+..++++.||++.... .++||||||++..+.. ...+++++|++||+|+++
T Consensus 82 i~Yg~Gs~~~G~~~~D~v~~g~~~v~~~~fg~~~~~~-------~~~GilGLg~~~~~~~~~~~~~~~~~L~~qg~i~~~ 154 (342)
T 2qzx_A 82 IKYGDGSYAKGKLYKDTVGIGGVSVRDQLFANVWSTS-------ARKGILGIGFQSGEATEFDYDNLPISLRNQGIIGKA 154 (342)
T ss_dssp EECTTSCEEEEEEEEEEEEETTEEEEEEEEEEEEEEC-------SSSCEEECSCGGGCSSSSCCCCHHHHHHHTTSSSSS
T ss_pred EEeCCCCeEEEEEEEEEEEECCEEecceEEEEEEecC-------CCcCEEEEccccccCCCccCccHHHHHHHCCCcCcc
Confidence 9999998 68999999999999999999999998653 4689999999877542 345789999999999999
Q ss_pred eEEEEecCCCCCCCCcEEEeCcccCCCCcccceEEeccCccceEEEeceEEEcCccccccCCCceEEEcCCCCceeccHH
Q 011141 227 VFSFWFNRNADEEEGGEIVFGGMDPDHYKGEHTYVPVTQKGYWQFDMGDVMIDGQTTGFCAGGCAAIADSGTSLLAGPTT 306 (492)
Q Consensus 227 ~FSl~l~~~~~~~~~G~L~fGgiD~~~~~g~l~~~p~~~~~~w~v~l~~i~vg~~~~~~~~~~~~aiiDTGtt~i~lP~~ 306 (492)
+||+||.+.. ...|+|+|||+|+++|.|++.|+|+.+..+|.|.+++|+|+++.+. .+..++|||||+++++|.+
T Consensus 155 ~Fs~~l~~~~--~~~G~l~fGg~d~~~~~g~l~~~p~~~~~~~~v~l~~i~v~g~~~~---~~~~aiiDSGTt~~~lP~~ 229 (342)
T 2qzx_A 155 AYSLYLNSAE--ASTGQIIFGGIDKAKYSGSLVDLPITSEKKLTVGLRSVNVRGRNVD---ANTNVLLDSGTTISYFTRS 229 (342)
T ss_dssp EEEEECCCTT--CSEEEEEETEEETTSBSSCCEEEECCCSSSCEEEEEEEEETTEEEE---EEEEEEECTTCSSEEECHH
T ss_pred EEEEEeCCCC--CCCeEEEECccchhhEecceEEEeccCCceEEEEEeEEEECCEecC---CCcCEEEeCCCCCEEcCHH
Confidence 9999998752 2379999999999999999999999998999999999999998764 3467999999999999999
Q ss_pred HHHHHHHHhCCccccccccchhhcchhHHHHHHhhcccCcccccccccccccCCCCcccccccccccccCCCCCCCCCcc
Q 011141 307 IITQVNHAIGATGIVSQECKAVVSQYGEEIINMLLAKDEPQKICSQIGLCTFDGSRGVSMGIESVVPENNHRASGGFHDA 386 (492)
Q Consensus 307 ~~~~l~~~i~~~~~~~~~C~~~~~~y~~~~~~~~~~~~~~~~~c~~~~~C~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 386 (492)
++++|++++++...+
T Consensus 230 ~~~~l~~~~~~~~~~----------------------------------------------------------------- 244 (342)
T 2qzx_A 230 IVRNILYAIGAQMKF----------------------------------------------------------------- 244 (342)
T ss_dssp HHHHHHHHHTCEEEE-----------------------------------------------------------------
T ss_pred HHHHHHHHhCCeeee-----------------------------------------------------------------
Confidence 999999999876100
Q ss_pred cCchhHHHHHHHHHHHhhhchHHHHHHHHHhhcccCCCCCCceeeeCccCCCCCcEEEEE-CCEEEeeCcCcceEEeC--
Q 011141 387 MCSTCEMAVVWMQNQLKQNQTQERILNYVNELCDRLPSPMGESAVDCSRLSSLPIVSFTI-GGKIFDLTPDQYILKVG-- 463 (492)
Q Consensus 387 ~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~c~~~~~~p~~~f~~-~~~~~~l~~~~y~~~~~-- 463 (492)
-+...+.|.++|+ .+|+|+|+| +|+.++|++++|+++..
T Consensus 245 -----------------------------------~~~~~~~~~~~C~---~~p~i~f~f~~g~~~~i~~~~~~~~~~~~ 286 (342)
T 2qzx_A 245 -----------------------------------DSAGNKVYVADCK---TSGTIDFQFGNNLKISVPVSEFLFQTYYT 286 (342)
T ss_dssp -----------------------------------CTTSCEEEEECTT---CCCEEEEEETTTEEEEEEGGGGEECCBCT
T ss_pred -----------------------------------ccCCCcEEEEECC---CCCcEEEEECCCcEEEEcHHHhccccccc
Confidence 0111337889998 489999999 69999999999999753
Q ss_pred -cCCcceeeeceeecccCCCCCCeEEEcCC
Q 011141 464 -EGDAAQCISGFSALDVAPPRGPLWYVYSC 492 (492)
Q Consensus 464 -~~~~~~C~~~~~~~~~~~~~~~~~ilg~~ 492 (492)
..+...|+.+|+..+ .||||++
T Consensus 287 ~~~~~~~C~~~i~~~~-------~~iLG~~ 309 (342)
T 2qzx_A 287 SGKPFPKCEVRIRESE-------DNILGDN 309 (342)
T ss_dssp TSCBCSSEEESEEECS-------SCEECHH
T ss_pred CCCCCCccEEEEecCC-------CcEeChH
Confidence 122357999987643 5999973
No 21
>1ibq_A Aspergillopepsin; aspartic proteinase, hydrolase; HET: MAN; 2.14A {Aspergillus phoenicis} SCOP: b.50.1.2
Probab=100.00 E-value=5.7e-50 Score=403.81 Aligned_cols=287 Identities=26% Similarity=0.397 Sum_probs=247.0
Q ss_pred CCceEEEEEEecCCCceEEEEEeCCCCCeeeeCCCCCCCccccCCCCCCCCCCCceeeCCceEEEEecCCe-eEeeEEEe
Q 011141 86 MDAQYFGEIGIGTPPQNFTVIFDTGSSNLWVPSSKCYFSIACYFHSKYRSGRSSTYKKNGKSADIHYGTGA-ISGFFSED 164 (492)
Q Consensus 86 ~~~~Y~~~i~iGtP~Q~~~v~lDTGSs~~WV~~~~C~~~~~C~~~~~y~~~~SsT~~~~~~~~~i~Yg~gs-~~G~~~~D 164 (492)
.+.+|+++|+|| +|++.|+|||||+++||++..|. ...|..++.|+|++|+ ++..++.|.+.|++|+ ++|.+++|
T Consensus 12 ~~~~Y~~~i~iG--~Q~~~v~~DTGSs~lWv~~~~C~-~~~c~~~~~y~~~~Ss-~~~~~~~~~i~Yg~Gs~~~G~~~~D 87 (325)
T 1ibq_A 12 NDEEYLTPVTVG--KSTLHLDFDTGSADLWVFSDELP-SSEQTGHDLYTPSSSA-TKLSGYSWDISYGDGSSASGDVYRD 87 (325)
T ss_dssp TTSCEEEEEEEB--TEEEEEEEETTCCCEEEECTTSC-HHHHTTSCCCBCCSSC-EECTTCBEEEECSSSCEEEEEEEEE
T ss_pred CCCEEEEEEEEC--CEEEEEEEeCCCccceEeeCCCC-ccccCCCCCCCchhcC-CccCCCEEEEEeCCCCEEEEEEEEe
Confidence 478899999999 89999999999999999999996 3457788999999999 7777999999999998 89999999
Q ss_pred EEEECceeecccEEEEEEecCCccccccccceeecCCcccccC---CCCCchHHHHHhcCCCCCCeEEEEecCCCCCCCC
Q 011141 165 HVKIGDLVVKDQEFIEATREPSLTFLLAKFDGILGLGFQEISV---GKAVPVWYNMVNQGLVNEPVFSFWFNRNADEEEG 241 (492)
Q Consensus 165 ~v~~g~~~v~~~~fg~~~~~~~~~~~~~~~dGIlGLg~~~~s~---~~~~~~~~~L~~qg~I~~~~FSl~l~~~~~~~~~ 241 (492)
+|+||+..++++.||++....+..+....++||||||++..+. ...++++++|.+| |++++||+||.+. ..
T Consensus 88 ~v~ig~~~v~~~~fg~~~~~~~~~~~~~~~~GilGLg~~~~s~~~p~~~~~~~~~l~~~--i~~~~FS~~l~~~----~~ 161 (325)
T 1ibq_A 88 TVTVGGVTTNKQAVEAASKISSEFVQDTANDGLLGLAFSSINTVQPKAQTTFFDTVKSQ--LDSPLFAVQLKHD----AP 161 (325)
T ss_dssp EEEETTEEEEEEEEEEEEEECHHHHTSTTCCEEEECSCGGGCCCBSSCCCCHHHHHGGG--SSSSEEEEEEETT----EE
T ss_pred EEEECCEEEcceEEEEEEecCccccccCCCceEEEeCcccccccCcCCCCCHHHHHHHh--cCCcEEEEEecCC----CC
Confidence 9999999999999999998664333335789999999988774 3577899999987 8899999999874 27
Q ss_pred cEEEeCcccCCCCcccceEEecc-CccceEEEeceEEEcCccccccCCCceEEEcCCCCceeccHHHHHHHHHHhCCccc
Q 011141 242 GEIVFGGMDPDHYKGEHTYVPVT-QKGYWQFDMGDVMIDGQTTGFCAGGCAAIADSGTSLLAGPTTIITQVNHAIGATGI 320 (492)
Q Consensus 242 G~L~fGgiD~~~~~g~l~~~p~~-~~~~w~v~l~~i~vg~~~~~~~~~~~~aiiDTGtt~i~lP~~~~~~l~~~i~~~~~ 320 (492)
|+|+|||+|+++|.|++.|+|+. ..++|.|.+++|+|+++.+ +..+..++|||||+++++|.+++++|++++.+...
T Consensus 162 G~l~fGg~d~~~~~g~l~~~p~~~~~~~w~v~l~~i~v~~~~~--~~~~~~aiiDSGTt~~~lP~~~~~~i~~~i~~a~~ 239 (325)
T 1ibq_A 162 GVYDFGYIDDSKYTGSITYTDADSSQGYWGFSTDGYSIGDGSS--SSSGFSAIADTGTTLILLDDEIVSAYYEQVSGAQE 239 (325)
T ss_dssp EEEEESSCCGGGBSSCCEEEECBCTTSSCEEEECEEEETTSCC--BSCCEEEEECTTCCSEEECHHHHHHHHTTSTTCBC
T ss_pred ceEEECCcChhhccCceEEEEcCCCCceEEEEECcEEECCeec--cCCCceEEEeCCCCcEeCCHHHHHHHHHhCCCceE
Confidence 99999999999999999999997 5789999999999999875 35678999999999999999999999999843310
Q ss_pred cccccchhhcchhHHHHHHhhcccCcccccccccccccCCCCcccccccccccccCCCCCCCCCcccCchhHHHHHHHHH
Q 011141 321 VSQECKAVVSQYGEEIINMLLAKDEPQKICSQIGLCTFDGSRGVSMGIESVVPENNHRASGGFHDAMCSTCEMAVVWMQN 400 (492)
Q Consensus 321 ~~~~C~~~~~~y~~~~~~~~~~~~~~~~~c~~~~~C~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~ 400 (492)
T Consensus 240 -------------------------------------------------------------------------------- 239 (325)
T 1ibq_A 240 -------------------------------------------------------------------------------- 239 (325)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred HHhhhchHHHHHHHHHhhcccCCCCCCceeeeCccCCCCCcEEEEECCEEEeeCcCcceEEeCcCCcceeeeceeecccC
Q 011141 401 QLKQNQTQERILNYVNELCDRLPSPMGESAVDCSRLSSLPIVSFTIGGKIFDLTPDQYILKVGEGDAAQCISGFSALDVA 480 (492)
Q Consensus 401 ~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~c~~~~~~p~~~f~~~~~~~~l~~~~y~~~~~~~~~~~C~~~~~~~~~~ 480 (492)
....+.|.++|+. .+|+|+|+|+|+.++|++++|+++..+.+...|+++|++.+
T Consensus 240 ----------------------~~~~g~~~~~C~~--~~P~i~f~fgg~~~~i~~~~~~~~~~~~~~~~C~~~i~~~~-- 293 (325)
T 1ibq_A 240 ----------------------SYEAGGYVFSCST--DLPDFTVVIGDYKAVVPGKYINYAPVSTGSSTCYGGIQSNS-- 293 (325)
T ss_dssp ----------------------CSSSSSCEEETTC--CCCCEEEEETTEEEEECHHHHEEEESSTTCSEEEESEEECT--
T ss_pred ----------------------cCcCCeEEEEcCC--CCCcEEEEECCEEEEECHHHhcccccCCCCCeEEEEEEcCC--
Confidence 1125678899994 89999999999999999999998764433468999998764
Q ss_pred CCCCCeEEEcCC
Q 011141 481 PPRGPLWYVYSC 492 (492)
Q Consensus 481 ~~~~~~~ilg~~ 492 (492)
.++.|||||+
T Consensus 294 --~~~~~iLG~~ 303 (325)
T 1ibq_A 294 --GLGLSILGDV 303 (325)
T ss_dssp --TTCSEEECHH
T ss_pred --CCCceEEChH
Confidence 3468999973
No 22
>1j71_A Candidapepsin, aspartic proteinase; candida tropicalis aspartic protease, SAPT1, hydrolase; 1.80A {Candida tropicalis} SCOP: b.50.1.2
Probab=100.00 E-value=3.1e-50 Score=407.32 Aligned_cols=287 Identities=26% Similarity=0.417 Sum_probs=249.1
Q ss_pred ceEeceecCCceEEEEEEecCCCceEEEEEeCCCCCeeeeCC--CCCC------CccccCCCCCCCCCCCceeeCCceEE
Q 011141 78 DIVALKNYMDAQYFGEIGIGTPPQNFTVIFDTGSSNLWVPSS--KCYF------SIACYFHSKYRSGRSSTYKKNGKSAD 149 (492)
Q Consensus 78 ~~~~l~~~~~~~Y~~~i~iGtP~Q~~~v~lDTGSs~~WV~~~--~C~~------~~~C~~~~~y~~~~SsT~~~~~~~~~ 149 (492)
..+||.|. +.+|+++|.||||+|++.|+|||||+++||++. .|.. ...|..++.|||++|+||+..++.|.
T Consensus 3 ~~~~l~~~-~~~Y~~~i~iGtP~q~~~v~~DTGSs~~Wv~~~~~~C~~~~~~~~~~~C~~~~~y~~~~SsT~~~~~~~~~ 81 (334)
T 1j71_A 3 VPTTLINE-GPSYAADIVVGSNQQKQTVVIDTGSSDLWVVDTDAECQVTYSGQTNNFCKQEGTFDPSSSSSAQNLNQDFS 81 (334)
T ss_dssp EEEEEEEC-SSSEEEEEEETTTTEEEEEEEETTCCCEEEEEEEEEECCCSTTCCTTGGGSSCCBCGGGCTTCEEEEEEEE
T ss_pred eeEEEecC-CcEEEEEEEEcCCCcEEEEEEcCCCCCEEEecCCCCCcCcccccccccccCCCcCCcccCCCcccCCCceE
Confidence 45788886 788999999999999999999999999999976 6752 23798899999999999999999999
Q ss_pred EEecCCe-eEeeEEEeEEEECceeecccEEEEEEecCCccccccccceeecCCcccccC--CCCCchHHHHHhcCCCCCC
Q 011141 150 IHYGTGA-ISGFFSEDHVKIGDLVVKDQEFIEATREPSLTFLLAKFDGILGLGFQEISV--GKAVPVWYNMVNQGLVNEP 226 (492)
Q Consensus 150 i~Yg~gs-~~G~~~~D~v~~g~~~v~~~~fg~~~~~~~~~~~~~~~dGIlGLg~~~~s~--~~~~~~~~~L~~qg~I~~~ 226 (492)
+.|++|+ ++|.+++|+|++|+..++++.||++.... .++||||||++..+. ....+++++|++||+|+++
T Consensus 82 i~Yg~Gs~~~G~~~~D~v~~g~~~~~~~~fg~~~~~~-------~~~GilGLg~~~~~~~~~~~~~~~~~L~~qg~i~~~ 154 (334)
T 1j71_A 82 IEYGDLTSSQGSFYKDTVGFGGISIKNQQFADVTTTS-------VDQGIMGIGFTADEAGYNLYDNVPVTLKKQGIINKN 154 (334)
T ss_dssp EEBTTSCEEEEEEEEEEEEETTEEEEEEEEEEEEEES-------SSSCEEECSCGGGSSTTCCCCCHHHHHHHTTSCSSS
T ss_pred EEECCCCEEEEEEEEEEEEECCEEEccEEEEEEEecC-------CCccEEEEcCCcccCccccCCcHHHHHHHCCCCCcc
Confidence 9999997 68999999999999999999999998653 468999999987754 2456789999999999999
Q ss_pred eEEEEecCCCCCCCCcEEEeCcccCCCCcccceEEeccCccceEEEeceEEEcCccccccCCCceEEEcCCCCceeccHH
Q 011141 227 VFSFWFNRNADEEEGGEIVFGGMDPDHYKGEHTYVPVTQKGYWQFDMGDVMIDGQTTGFCAGGCAAIADSGTSLLAGPTT 306 (492)
Q Consensus 227 ~FSl~l~~~~~~~~~G~L~fGgiD~~~~~g~l~~~p~~~~~~w~v~l~~i~vg~~~~~~~~~~~~aiiDTGtt~i~lP~~ 306 (492)
+||+||.+.. ...|+|+|||+|+++|.|++.|+|+.+..+|.|.+++|+|+++.+. .+..++|||||+++++|.+
T Consensus 155 ~Fs~~l~~~~--~~~G~l~fGg~d~~~~~g~l~~~p~~~~~~~~v~l~~i~v~g~~~~---~~~~~iiDSGTt~~~lP~~ 229 (334)
T 1j71_A 155 AYSLYLNSED--ASTGKIIFGGVDNAKYTGTLTALPVTSSVELRVHLGSINFDGTSVS---TNADVVLDSGTTITYFSQS 229 (334)
T ss_dssp EEEEECCCTT--CSEEEEEETEEETTSEEEEEEEEECCCSSSCEEEEEEEEETTEEEE---EEEEEEECTTCSSEEECHH
T ss_pred EEEEEeCCCC--CCCeEEEEeeechHHccCceEEEEccCCCeEEEEEeEEEECCEecc---CCccEEEeCCCCcEecCHH
Confidence 9999998752 2379999999999999999999999998999999999999998764 3467999999999999999
Q ss_pred HHHHHHHHhCCccccccccchhhcchhHHHHHHhhcccCcccccccccccccCCCCcccccccccccccCCCCCCCCCcc
Q 011141 307 IITQVNHAIGATGIVSQECKAVVSQYGEEIINMLLAKDEPQKICSQIGLCTFDGSRGVSMGIESVVPENNHRASGGFHDA 386 (492)
Q Consensus 307 ~~~~l~~~i~~~~~~~~~C~~~~~~y~~~~~~~~~~~~~~~~~c~~~~~C~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 386 (492)
++++|++++++..
T Consensus 230 ~~~~l~~~~~~~~------------------------------------------------------------------- 242 (334)
T 1j71_A 230 TADKFARIVGATW------------------------------------------------------------------- 242 (334)
T ss_dssp HHHHHHHHHTCEE-------------------------------------------------------------------
T ss_pred HHHHHHHHcCCcc-------------------------------------------------------------------
Confidence 9999999998761
Q ss_pred cCchhHHHHHHHHHHHhhhchHHHHHHHHHhhcccCCCCCCcee-eeCccCCCCCcEEEEE-CCEEEeeCcCcceEEeCc
Q 011141 387 MCSTCEMAVVWMQNQLKQNQTQERILNYVNELCDRLPSPMGESA-VDCSRLSSLPIVSFTI-GGKIFDLTPDQYILKVGE 464 (492)
Q Consensus 387 ~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~-~~c~~~~~~p~~~f~~-~~~~~~l~~~~y~~~~~~ 464 (492)
....+.|. ++|+ .+|+|+|+| +|+.++|++++|+++..+
T Consensus 243 ------------------------------------~~~~~~~~~~~C~---~~p~i~f~f~~g~~~~i~~~~y~~~~~~ 283 (334)
T 1j71_A 243 ------------------------------------DSRNEIYRLPSCD---LSGDAVFNFDQGVKITVPLSELILKDSD 283 (334)
T ss_dssp ------------------------------------ETTTTEEECSSSC---CCSEEEEEESTTCEEEEEGGGGEEECSS
T ss_pred ------------------------------------cCCCceEEEEcCC---CCCceEEEEcCCcEEEECHHHheeecCC
Confidence 01134677 8998 489999999 799999999999998644
Q ss_pred CCcceeeeceeecccCCCCCCeEEEcCC
Q 011141 465 GDAAQCISGFSALDVAPPRGPLWYVYSC 492 (492)
Q Consensus 465 ~~~~~C~~~~~~~~~~~~~~~~~ilg~~ 492 (492)
+ ..|+++|+..+ .||||++
T Consensus 284 ~--~~C~~~i~~~~-------~~iLG~~ 302 (334)
T 1j71_A 284 S--SICYFGISRND-------ANILGDN 302 (334)
T ss_dssp S--SCEEESEEECT-------TCEECHH
T ss_pred C--CeeEEEEeECC-------CcEEChH
Confidence 3 35999987642 5999973
No 23
>1izd_A Aspartic proteinase; sugar binding, acid protease, hydrolase; HET: MAN; 1.90A {Aspergillus oryzae} SCOP: b.50.1.2 PDB: 1ize_A*
Probab=100.00 E-value=3.8e-50 Score=404.78 Aligned_cols=284 Identities=27% Similarity=0.392 Sum_probs=245.6
Q ss_pred CCceEEEEEEecCCCceEEEEEeCCCCCeeeeCCCCCCCccccCCCCCCCCCCCceeeCCceEEEEecCCe-eEeeEEEe
Q 011141 86 MDAQYFGEIGIGTPPQNFTVIFDTGSSNLWVPSSKCYFSIACYFHSKYRSGRSSTYKKNGKSADIHYGTGA-ISGFFSED 164 (492)
Q Consensus 86 ~~~~Y~~~i~iGtP~Q~~~v~lDTGSs~~WV~~~~C~~~~~C~~~~~y~~~~SsT~~~~~~~~~i~Yg~gs-~~G~~~~D 164 (492)
.+.+|+++|.|| ||++.|+|||||+++||+|..|. ...|..++.|+|++|+ ++..++.|.+.|++|+ ++|.+++|
T Consensus 13 ~~~~Y~~~i~iG--~q~~~v~~DTGSs~lWv~~~~C~-~~~c~~~~~y~~~~Ss-~~~~~~~~~i~Yg~Gs~~~G~~~~D 88 (323)
T 1izd_A 13 NDEEYITQVTVG--DDTLGLDFDTGSADLWVFSSQTP-SSERSGHDYYTPGSSA-QKIDGATWSISYGDGSSASGDVYKD 88 (323)
T ss_dssp GGCCEEEEEEET--TEEEEEEEETTCCCEEECBTTSC-HHHHTTCCCBCCCTTC-EEEEEEEEEEECTTSCEEEEEEEEE
T ss_pred CCCEEEEEEEEC--CEEEEEEEcCCCcceEEecCCCC-cccccCCCCCCccccC-CccCCCeEEEEcCCCCeEEEEEEEE
Confidence 468899999999 89999999999999999999996 3467788999999999 7777899999999998 89999999
Q ss_pred EEEECceeecccEEEEEEecCCccccccccceeecCCcccccC---CCCCchHHHHHhcCCCCCCeEEEEecCCCCCCCC
Q 011141 165 HVKIGDLVVKDQEFIEATREPSLTFLLAKFDGILGLGFQEISV---GKAVPVWYNMVNQGLVNEPVFSFWFNRNADEEEG 241 (492)
Q Consensus 165 ~v~~g~~~v~~~~fg~~~~~~~~~~~~~~~dGIlGLg~~~~s~---~~~~~~~~~L~~qg~I~~~~FSl~l~~~~~~~~~ 241 (492)
+|+|++.+++++.||++....+..+....++||||||++..+. ...++++++|++| |++++||+||.+. ..
T Consensus 89 ~v~ig~~~v~~~~fg~~~~~~~~~~~~~~~~GilGLg~~~~s~~~p~~~~~~~~~l~~~--i~~~~FS~~L~~~----~~ 162 (323)
T 1izd_A 89 KVTVGGVSYDSQAVESAEKVSSEFTQDTANDGLLGLAFSSINTVQPTPQKTFFDNVKSS--LSEPIFAVALKHN----AP 162 (323)
T ss_dssp EEEETTEEEEEEEEEEEEEECHHHHHCTTCCEEEECSCGGGCCCBSSCCCCHHHHHGGG--SSSSEEEEECCTT----SC
T ss_pred EEEECCEEECceEEEEEEeccccccccCCCceEEecCcccccccCCCCCCCHHHHHHHh--ccCcEEEEEccCC----CC
Confidence 9999999999999999998764333335789999999998775 3577899999987 8899999999874 27
Q ss_pred cEEEeCcccCCCCcccceEEecc-CccceEEEeceEEEcCccccccCCCceEEEcCCCCceeccHHHHHHHHHHhCCccc
Q 011141 242 GEIVFGGMDPDHYKGEHTYVPVT-QKGYWQFDMGDVMIDGQTTGFCAGGCAAIADSGTSLLAGPTTIITQVNHAIGATGI 320 (492)
Q Consensus 242 G~L~fGgiD~~~~~g~l~~~p~~-~~~~w~v~l~~i~vg~~~~~~~~~~~~aiiDTGtt~i~lP~~~~~~l~~~i~~~~~ 320 (492)
|+|+|||+|+++|.|++.|+|+. ..++|.|.+++|+|++ .+ +..+..++|||||+++++|.+++++|++++.+...
T Consensus 163 G~l~fGg~d~~~~~g~l~~~p~~~~~~~w~v~l~~i~v~~-~~--~~~~~~aiiDSGTs~~~lp~~~~~~i~~~i~ga~~ 239 (323)
T 1izd_A 163 GVYDFGYTDSSKYTGSITYTDVDNSQGFWGFTADGYSIGS-DS--SSDSITGIADTGTTLLLLDDSIVDAYYEQVNGASY 239 (323)
T ss_dssp EEEEESSCCTTSEEEEEEEEECBCTTSSCEEEESEEEETT-EE--ECCCEEEEECTTCCSEEECHHHHHHHHTTSTTCEE
T ss_pred CEEEECCcCccccccceEEEECCCCCceEEEEECeEEECC-cc--cCCCceEEEeCCCcceeCCHHHHHHHHHhCCCcEE
Confidence 99999999999999999999996 6789999999999999 43 55678999999999999999999999999853310
Q ss_pred cccccchhhcchhHHHHHHhhcccCcccccccccccccCCCCcccccccccccccCCCCCCCCCcccCchhHHHHHHHHH
Q 011141 321 VSQECKAVVSQYGEEIINMLLAKDEPQKICSQIGLCTFDGSRGVSMGIESVVPENNHRASGGFHDAMCSTCEMAVVWMQN 400 (492)
Q Consensus 321 ~~~~C~~~~~~y~~~~~~~~~~~~~~~~~c~~~~~C~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~ 400 (492)
T Consensus 240 -------------------------------------------------------------------------------- 239 (323)
T 1izd_A 240 -------------------------------------------------------------------------------- 239 (323)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred HHhhhchHHHHHHHHHhhcccCCCCCCceeeeCccCCCCCcEEEEECCEEEeeCcCcceEEeCcCCcceeeeceeecccC
Q 011141 401 QLKQNQTQERILNYVNELCDRLPSPMGESAVDCSRLSSLPIVSFTIGGKIFDLTPDQYILKVGEGDAAQCISGFSALDVA 480 (492)
Q Consensus 401 ~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~c~~~~~~p~~~f~~~~~~~~l~~~~y~~~~~~~~~~~C~~~~~~~~~~ 480 (492)
....|.|.++|+. .+|+|+|+|||++|+|++++|+++... ...|+++|++.+
T Consensus 240 ----------------------~~~~g~~~~~C~~--~~P~i~f~fgg~~~~i~~~~~~~~~~~--~~~C~~~i~~~~-- 291 (323)
T 1izd_A 240 ----------------------DSSQGGYVFPSSA--SLPDFSVTIGDYTATVPGEYISFADVG--NGQTFGGIQSNS-- 291 (323)
T ss_dssp ----------------------ETTTTEEEEETTC--CCCCEEEEETTEEEEECHHHHEEEECS--TTEEEESEEECT--
T ss_pred ----------------------cCcCCEEEEECCC--CCceEEEEECCEEEecCHHHeEEecCC--CCeEEEEEEcCC--
Confidence 1125678999994 899999999999999999999988632 358999998764
Q ss_pred CCCCCeEEEcCC
Q 011141 481 PPRGPLWYVYSC 492 (492)
Q Consensus 481 ~~~~~~~ilg~~ 492 (492)
.++.|||||+
T Consensus 292 --~~~~~IlG~~ 301 (323)
T 1izd_A 292 --GIGFSIFGDV 301 (323)
T ss_dssp --TTSSEEECHH
T ss_pred --CCCcEEEChH
Confidence 3468999974
No 24
>3pvk_A Candidapepsin-2; hydrolase; 1.27A {Candida albicans} SCOP: b.50.1.2 PDB: 1eag_A 3q70_A* 1zap_A* 2qzw_A 2h6t_A* 2h6s_A*
Probab=100.00 E-value=1.8e-49 Score=402.96 Aligned_cols=293 Identities=25% Similarity=0.401 Sum_probs=247.5
Q ss_pred ceEeceecCCceEEEEEEecCCCceEEEEEeCCCCCeeeeCCC--CC------CCccccCCCCCCCCCCCceeeCCceEE
Q 011141 78 DIVALKNYMDAQYFGEIGIGTPPQNFTVIFDTGSSNLWVPSSK--CY------FSIACYFHSKYRSGRSSTYKKNGKSAD 149 (492)
Q Consensus 78 ~~~~l~~~~~~~Y~~~i~iGtP~Q~~~v~lDTGSs~~WV~~~~--C~------~~~~C~~~~~y~~~~SsT~~~~~~~~~ 149 (492)
..+||.+. +.+|+++|.||||||++.|++||||+++||++.. |. ....|..++.|+|++|+||+..++.|.
T Consensus 3 v~~~l~~~-~~~Y~~~i~iGtP~q~~~v~~DTGSs~~Wv~~~~~~C~~~~~~~~~~~C~~~~~y~~~~SsT~~~~~~~~~ 81 (342)
T 3pvk_A 3 VPVTLHNE-QVTYAADITVGSNNQKLNVIVDTGSSDLWVPDVNVDCQVTYSDQTADFCKQKGTYDPSGSSASQDLNTPFK 81 (342)
T ss_dssp EEEEEEEC-SSSEEEEEEETTTTEEEEEEEETTCCCEEEEEEEEEECCCSTTCCTTGGGTTCCBCGGGCTTCEEEEEEEE
T ss_pred cceEEecC-CcEEEEEEEEcCCCcEEEEEEECCCcceEEEcCCCCCcccccccccCCCCCCCcCCCccCcceeecCCeEE
Confidence 45778775 6789999999999999999999999999999764 63 235798899999999999999999999
Q ss_pred EEecCCe-eEeeEEEeEEEECceeecccEEEEEEecCCccccccccceeecCCcccccCC-CCCchHHHHHhcCCCCCCe
Q 011141 150 IHYGTGA-ISGFFSEDHVKIGDLVVKDQEFIEATREPSLTFLLAKFDGILGLGFQEISVG-KAVPVWYNMVNQGLVNEPV 227 (492)
Q Consensus 150 i~Yg~gs-~~G~~~~D~v~~g~~~v~~~~fg~~~~~~~~~~~~~~~dGIlGLg~~~~s~~-~~~~~~~~L~~qg~I~~~~ 227 (492)
+.|++|+ ++|.+++|+|+|++..++++.||++.... ..+||||||++..+.. ...+++++|++||+|++++
T Consensus 82 i~Yg~gs~~~G~~~~D~v~ig~~~v~~~~fg~~~~~~-------~~~GilGLg~~~~~~~~~~~~~~~~L~~qg~i~~~~ 154 (342)
T 3pvk_A 82 IGYGDGSSSQGTLYKDTVGFGGVSIKNQVLADVDSTS-------IDQGILGVGYKTNEAGGSYDNVPVTLKKQGVIAKNA 154 (342)
T ss_dssp EECSSSCEEEEEEEEEEEEETTEEEEEEEEEEEEEES-------SSSCEEECSCGGGCSSCSSCCHHHHHHHTTSSSSSE
T ss_pred EEecCCCeEEEEEEEEEEEECCEEecceEEEEEEccC-------CCccEEEecCccccccccCCcHHHHHHhcCCCCCce
Confidence 9999998 89999999999999999999999998654 4699999999886543 3567899999999999999
Q ss_pred EEEEecCCCCCCCCcEEEeCcccCCCCcccceEEeccCccceEEEeceEEEcCccccccCCCceEEEcCCCCceeccHHH
Q 011141 228 FSFWFNRNADEEEGGEIVFGGMDPDHYKGEHTYVPVTQKGYWQFDMGDVMIDGQTTGFCAGGCAAIADSGTSLLAGPTTI 307 (492)
Q Consensus 228 FSl~l~~~~~~~~~G~L~fGgiD~~~~~g~l~~~p~~~~~~w~v~l~~i~vg~~~~~~~~~~~~aiiDTGtt~i~lP~~~ 307 (492)
||+||.+.. ...|+|+|||+|+++|.|++.|+|+....+|.|.+++|.|+++.+.. .+..++|||||+++++|.++
T Consensus 155 fs~~l~~~~--~~~G~l~fGg~d~~~~~g~l~~~p~~~~~~~~v~l~~i~v~g~~~~~--~~~~~iiDSGtt~~~lP~~~ 230 (342)
T 3pvk_A 155 YSLYLNSPD--AATGQIIFGGVDNAKYSGSLIALPVTSDRELRISLGSVEVSGKTINT--DNVDVLLDSGTTITYLQQDL 230 (342)
T ss_dssp EEEECCCTT--CSEEEEEETEEETTSBSSCCEEEECCCSSSCEEEEEEEEETTEEEEE--EEEEEEECTTCSSEEECHHH
T ss_pred EEEEeCCCC--CCCcEEEECccCccceeeeeEEeecCccceEEEEEeEEEECCEEecC--CCceEEEeCCCCCeecCHHH
Confidence 999998753 23799999999999999999999999989999999999999988753 34789999999999999999
Q ss_pred HHHHHHHhCCccccccccchhhcchhHHHHHHhhcccCcccccccccccccCCCCcccccccccccccCCCCCCCCCccc
Q 011141 308 ITQVNHAIGATGIVSQECKAVVSQYGEEIINMLLAKDEPQKICSQIGLCTFDGSRGVSMGIESVVPENNHRASGGFHDAM 387 (492)
Q Consensus 308 ~~~l~~~i~~~~~~~~~C~~~~~~y~~~~~~~~~~~~~~~~~c~~~~~C~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 387 (492)
+++|++++++....
T Consensus 231 ~~~i~~~~~~~~~~------------------------------------------------------------------ 244 (342)
T 3pvk_A 231 ADQIIKAFNGKLTQ------------------------------------------------------------------ 244 (342)
T ss_dssp HHHHHHHTTCEEEE------------------------------------------------------------------
T ss_pred HHHHHHHcCCeecc------------------------------------------------------------------
Confidence 99999999876210
Q ss_pred CchhHHHHHHHHHHHhhhchHHHHHHHHHhhcccCCCCCCceeeeCccCCCCCcEEEEEC-CEEEeeCcCcceEEeCcCC
Q 011141 388 CSTCEMAVVWMQNQLKQNQTQERILNYVNELCDRLPSPMGESAVDCSRLSSLPIVSFTIG-GKIFDLTPDQYILKVGEGD 466 (492)
Q Consensus 388 c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~c~~~~~~p~~~f~~~-~~~~~l~~~~y~~~~~~~~ 466 (492)
-....+.|.++|+ ..|+|+|+|+ |.+++|++++|+++.....
T Consensus 245 ----------------------------------~~~~~~~~~~~C~---~~p~i~f~f~~g~~~~vp~~~~~~~~~~~~ 287 (342)
T 3pvk_A 245 ----------------------------------DSNGNSFYEVDCN---LSGDVVFNFSKNAKISVPASEFAASLQGDD 287 (342)
T ss_dssp ----------------------------------CTTSCEEEEECSC---CCSEEEEEESTTCEEEEEGGGGEEC-----
T ss_pred ----------------------------------cCCCceEEEEecC---CCCceEEEECCCCEEEEcHHHheeeccccC
Confidence 0011235899999 4699999997 8999999999999743211
Q ss_pred ---cceeeeceeecccCCCCCCeEEEcCC
Q 011141 467 ---AAQCISGFSALDVAPPRGPLWYVYSC 492 (492)
Q Consensus 467 ---~~~C~~~~~~~~~~~~~~~~~ilg~~ 492 (492)
...|+++|... +.||||++
T Consensus 288 g~~~~~C~~~i~~~-------~~~ilG~~ 309 (342)
T 3pvk_A 288 GQPYDKCQLLFDVN-------DANILGDN 309 (342)
T ss_dssp -----CEEESEEEC-------TTCEECHH
T ss_pred CCcCCeeEEEEeeC-------CCeEeCHH
Confidence 25799999772 46999973
No 25
>1bxo_A Protein (penicillopepsin); hydrolase, phosphonate inhibitors, macrocycle; HET: MAN PP7; 0.95A {Penicillium janthinellum} SCOP: b.50.1.2 PDB: 1apu_E* 1apv_E* 1apw_E* 1apt_E* 1bxq_A* 1ppk_E* 1ppl_E* 1ppm_E* 2wea_A* 2web_A* 2wec_A* 2wed_A* 3app_A
Probab=100.00 E-value=5.1e-50 Score=403.81 Aligned_cols=284 Identities=25% Similarity=0.411 Sum_probs=244.2
Q ss_pred CCceEEEEEEecCCCceEEEEEeCCCCCeeeeCCCCCCCccccCCCCCCCCCCCceeeCCceEEEEecCCe-eEeeEEEe
Q 011141 86 MDAQYFGEIGIGTPPQNFTVIFDTGSSNLWVPSSKCYFSIACYFHSKYRSGRSSTYKKNGKSADIHYGTGA-ISGFFSED 164 (492)
Q Consensus 86 ~~~~Y~~~i~iGtP~Q~~~v~lDTGSs~~WV~~~~C~~~~~C~~~~~y~~~~SsT~~~~~~~~~i~Yg~gs-~~G~~~~D 164 (492)
.+.+|+++|.|| ||+|.|+|||||+++||++..|. ...|..++.|||++|+ ++..++.|.+.|++|+ ++|.+++|
T Consensus 13 ~~~~Y~~~i~iG--~Q~~~v~~DTGSs~lWv~~~~C~-~~~c~~~~~y~~~~Ss-~~~~~~~~~i~Yg~Gs~~~G~~~~D 88 (323)
T 1bxo_A 13 NDEEYITPVTIG--GTTLNLNFDTGSADLWVFSTELP-ASQQSGHSVYNPSATG-KELSGYTWSISYGDGSSASGNVFTD 88 (323)
T ss_dssp GGSCEEEEEEET--TEEEEEEEETTCCCEEECBTTSC-HHHHTTSCCBCHHHHC-EEEEEEEEEEECTTSCEEEEEEEEE
T ss_pred CCCEEEEEEEEC--CEEEEEEEeCCCcceEEecCCCC-chhccCCCCCCcccCC-cccCCCeEEEEeCCCCeEEEEEEEE
Confidence 468899999999 89999999999999999999996 3457788999999999 8777899999999998 89999999
Q ss_pred EEEECceeecccEEEEEEecCCccccccccceeecCCcccccC---CCCCchHHHHHhcCCCCCCeEEEEecCCCCCCCC
Q 011141 165 HVKIGDLVVKDQEFIEATREPSLTFLLAKFDGILGLGFQEISV---GKAVPVWYNMVNQGLVNEPVFSFWFNRNADEEEG 241 (492)
Q Consensus 165 ~v~~g~~~v~~~~fg~~~~~~~~~~~~~~~dGIlGLg~~~~s~---~~~~~~~~~L~~qg~I~~~~FSl~l~~~~~~~~~ 241 (492)
+|+||+.+++++.||++...++..+....++||||||++..+. ...++++++|++| |++++||+||.+. ..
T Consensus 89 ~v~ig~~~v~~~~fg~~~~~~~~~~~~~~~~GilGLg~~~~s~~~~~~~~~~~~~l~~~--i~~~~FS~~L~~~----~~ 162 (323)
T 1bxo_A 89 SVTVGGVTAHGQAVQAAQQISAQFQQDTNNDGLLGLAFSSINTVQPQSQTTFFDTVKSS--LAQPLFAVALKHQ----QP 162 (323)
T ss_dssp EEEETTEEEEEEEEEEEEEECHHHHTCTTCSEEEECSCGGGCCCBSSCCCCHHHHHGGG--BSSSEEEEECCSS----SC
T ss_pred EEEECCEEECcEEEEEEEecCcccccCCCCceEEEeCcccccccccCCCCCHHHHHHHh--cCCcEEEEEEeCC----CC
Confidence 9999999999999999998654333335789999999988765 2467899999987 8899999999874 27
Q ss_pred cEEEeCcccCCCCcccceEEecc-CccceEEEeceEEEcCccccccCCCceEEEcCCCCceeccHHHHHHHHHHhCCccc
Q 011141 242 GEIVFGGMDPDHYKGEHTYVPVT-QKGYWQFDMGDVMIDGQTTGFCAGGCAAIADSGTSLLAGPTTIITQVNHAIGATGI 320 (492)
Q Consensus 242 G~L~fGgiD~~~~~g~l~~~p~~-~~~~w~v~l~~i~vg~~~~~~~~~~~~aiiDTGtt~i~lP~~~~~~l~~~i~~~~~ 320 (492)
|+|+|||+|+++|.|++.|+|+. ..++|.|.+++|+|++ + +..+..++|||||+++++|.+++++|++++.+...
T Consensus 163 G~l~fGg~d~~~~~g~l~~~p~~~~~~~w~v~l~~i~v~~--~--~~~~~~aiiDSGTs~~~lP~~~~~~l~~~i~~a~~ 238 (323)
T 1bxo_A 163 GVYDFGFIDSSKYTGSLTYTGVDNSQGFWSFNVDSYTAGS--Q--SGDGFSGIADTGTTLLLLDDSVVSQYYSQVSGAQQ 238 (323)
T ss_dssp EEEEESSCCGGGBSSCCEEEECBCTTSSCEEEEEEEEETT--E--EEEEEEEEECTTCSSEEECHHHHHHHHTTSTTCEE
T ss_pred ceEEEeCcChhhccCceEEEECCCCCCeEEEEEeeEEECC--c--cCCCceEEEeCCCCceeCCHHHHHHHHHhCCCceE
Confidence 99999999999999999999996 6789999999999999 2 34567899999999999999999999999843310
Q ss_pred cccccchhhcchhHHHHHHhhcccCcccccccccccccCCCCcccccccccccccCCCCCCCCCcccCchhHHHHHHHHH
Q 011141 321 VSQECKAVVSQYGEEIINMLLAKDEPQKICSQIGLCTFDGSRGVSMGIESVVPENNHRASGGFHDAMCSTCEMAVVWMQN 400 (492)
Q Consensus 321 ~~~~C~~~~~~y~~~~~~~~~~~~~~~~~c~~~~~C~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~ 400 (492)
T Consensus 239 -------------------------------------------------------------------------------- 238 (323)
T 1bxo_A 239 -------------------------------------------------------------------------------- 238 (323)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred HHhhhchHHHHHHHHHhhcccCCCCCCceeeeCccCCCCCcEEEEECCEEEeeCcCcceEEeCcCCcceeeeceeecccC
Q 011141 401 QLKQNQTQERILNYVNELCDRLPSPMGESAVDCSRLSSLPIVSFTIGGKIFDLTPDQYILKVGEGDAAQCISGFSALDVA 480 (492)
Q Consensus 401 ~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~c~~~~~~p~~~f~~~~~~~~l~~~~y~~~~~~~~~~~C~~~~~~~~~~ 480 (492)
....+.|.++|+. .+|+|+|+|+|+.|+|++++|+++..+ +...|+++|++.+
T Consensus 239 ----------------------~~~~g~~~~~C~~--~~P~i~f~fgg~~~~l~~~~~~~~~~~-~~~~C~~~i~~~~-- 291 (323)
T 1bxo_A 239 ----------------------DSNAGGYVFDCST--NLPDFSVSISGYTATVPGSLINYGPSG-DGSTCLGGIQSNS-- 291 (323)
T ss_dssp ----------------------ETTTTEEEECTTC--CCCCEEEEETTEEEEECHHHHEEEECS-SSSCEEESEEECT--
T ss_pred ----------------------cCcCCEEEEECCC--CCceEEEEECCEEEEECHHHeEEeccC-CCCeEEEEEECCC--
Confidence 1125678999994 899999999999999999999987643 2357999998864
Q ss_pred CCCCCeEEEcCC
Q 011141 481 PPRGPLWYVYSC 492 (492)
Q Consensus 481 ~~~~~~~ilg~~ 492 (492)
.++.|||||+
T Consensus 292 --~~~~~ILG~~ 301 (323)
T 1bxo_A 292 --GIGFSIFGDI 301 (323)
T ss_dssp --TCSSEEECHH
T ss_pred --CCCcEEEChH
Confidence 3468999974
No 26
>1wkr_A Polyporopepsin; hydrolase, hydrolase-hydrolase inhibitor complex; HET: STA; 1.30A {Irpex lacteus} SCOP: b.50.1.2
Probab=100.00 E-value=2.1e-49 Score=402.22 Aligned_cols=290 Identities=27% Similarity=0.462 Sum_probs=246.1
Q ss_pred ceEeceecCCceEEEEEEecCCCceEEEEEeCCCCCeeeeCCCCCCCccccCCCCCCCCCCCceeeCCceEEEEecCCee
Q 011141 78 DIVALKNYMDAQYFGEIGIGTPPQNFTVIFDTGSSNLWVPSSKCYFSIACYFHSKYRSGRSSTYKKNGKSADIHYGTGAI 157 (492)
Q Consensus 78 ~~~~l~~~~~~~Y~~~i~iGtP~Q~~~v~lDTGSs~~WV~~~~C~~~~~C~~~~~y~~~~SsT~~~~~~~~~i~Yg~gs~ 157 (492)
..+||.|+ +.+|+++|.||||+|++.|+|||||+++||+|. +.|+|++|+++ .++.|.+.|++|++
T Consensus 3 ~~~~l~n~-~~~Y~~~i~iGTP~q~~~v~~DTGSs~lWv~~~-----------~~y~~s~Ss~~--~~~~~~i~Yg~Gs~ 68 (340)
T 1wkr_A 3 GSVPATNQ-LVDYVVNVGVGSPATTYSLLVDTGSSNTWLGAD-----------KSYVKTSTSSA--TSDKVSVTYGSGSF 68 (340)
T ss_dssp EEEEEEEC-SSCEEEEEEETTTTEEEEEEEETTCCCCEECSS-----------SCCCCCTTCEE--EEEEEEEECSSCEE
T ss_pred ccEeeecc-CcEEEEEEEECCCCcEEEEEEeCCChhheecCC-----------CccCCcCCccc--cCceEEEEECCcEE
Confidence 45899997 568999999999999999999999999999752 57999888754 47899999999999
Q ss_pred EeeEEEeEEEECceeecccEEEEEEecCCccccccccceeecCCcccccC--------CCCCchHHHHHhcCCCCCCeEE
Q 011141 158 SGFFSEDHVKIGDLVVKDQEFIEATREPSLTFLLAKFDGILGLGFQEISV--------GKAVPVWYNMVNQGLVNEPVFS 229 (492)
Q Consensus 158 ~G~~~~D~v~~g~~~v~~~~fg~~~~~~~~~~~~~~~dGIlGLg~~~~s~--------~~~~~~~~~L~~qg~I~~~~FS 229 (492)
+|.+++|+|+||+.+++++.||++....+ | ..++||||||++..+. ...++++++|++||+|++++||
T Consensus 69 ~G~~~~Dtv~~g~~~v~~~~fg~~~~~~~--~--~~~~GilGLg~~~~s~~~~~~~~~~~~~~~~~~l~~~g~i~~~~FS 144 (340)
T 1wkr_A 69 SGTEYTDTVTLGSLTIPKQSIGVASRDSG--F--DGVDGILGVGPVDLTVGTLSPHTSTSIPTVTDNLFSQGTIPTNLLA 144 (340)
T ss_dssp EEEEEEEEEEETTEEEEEEEEEEEEEEES--C--TTCSEEEECSCGGGGTTSEESCTTCCCCCHHHHHHHTTSSSSSEEE
T ss_pred EEEEEEEEEEECCEEEcceEEEEEEccCC--C--cCCCcEEECCccccccccccccccccCCCHHHHHHHcCCCCCCEEE
Confidence 99999999999999999999999997643 3 2579999999988765 3457899999999999999999
Q ss_pred EEecCCC-CCCCCcEEEeCcccCCCCcccceEEeccC----ccceEEEeceEEEcC-ccccccCCCceEEEcCCCCceec
Q 011141 230 FWFNRNA-DEEEGGEIVFGGMDPDHYKGEHTYVPVTQ----KGYWQFDMGDVMIDG-QTTGFCAGGCAAIADSGTSLLAG 303 (492)
Q Consensus 230 l~l~~~~-~~~~~G~L~fGgiD~~~~~g~l~~~p~~~----~~~w~v~l~~i~vg~-~~~~~~~~~~~aiiDTGtt~i~l 303 (492)
+||.+.. +....|+|+|||+|+++|.|++.|+|+.. .++|.|. ++|.|++ +.+. .+..++|||||+++++
T Consensus 145 ~~l~~~~~~~~~~G~l~fGg~d~~~~~g~l~~~p~~~~~~~~~~w~v~-~~i~v~~~~~l~---~~~~aiiDSGTt~~~l 220 (340)
T 1wkr_A 145 VSFEPTTSESSTNGELTFGATDSSKYTGSITYTPITSTSPASAYWGIN-QSIRYGSSTSIL---SSTAGIVDTGTTLTLI 220 (340)
T ss_dssp EECCCCSSSSEEEEEEEESSCCGGGCSSCCEEEECCSSTTGGGSSEEE-EEEEETTTEEEE---EEEEEEECTTBCSEEE
T ss_pred EEecCCCCCCCCCcEEEEcccChhhcccceEEEECccCCCCcceEEEE-eeEEECCCeEcc---CCCeEEEeCCcccccC
Confidence 9998742 12247999999999999999999999987 7899999 9999998 6653 2467999999999999
Q ss_pred cHHHHHHHHHHhCCccccccccchhhcchhHHHHHHhhcccCcccccccccccccCCCCcccccccccccccCCCCCCCC
Q 011141 304 PTTIITQVNHAIGATGIVSQECKAVVSQYGEEIINMLLAKDEPQKICSQIGLCTFDGSRGVSMGIESVVPENNHRASGGF 383 (492)
Q Consensus 304 P~~~~~~l~~~i~~~~~~~~~C~~~~~~y~~~~~~~~~~~~~~~~~c~~~~~C~~~~~~~~~~~~~~~~~~~~~~~~~~~ 383 (492)
|.+++++|.+++++..
T Consensus 221 P~~~~~~l~~~~~a~~---------------------------------------------------------------- 236 (340)
T 1wkr_A 221 ASDAFAKYKKATGAVA---------------------------------------------------------------- 236 (340)
T ss_dssp CHHHHHHHHHHHTCEE----------------------------------------------------------------
T ss_pred CHHHHHHHHHhhCCEE----------------------------------------------------------------
Confidence 9999999999987651
Q ss_pred CcccCchhHHHHHHHHHHHhhhchHHHHHHHHHhhcccCCCCCCceeeeCccCCCCCcEEEEECCEEEeeCcCcceEEeC
Q 011141 384 HDAMCSTCEMAVVWMQNQLKQNQTQERILNYVNELCDRLPSPMGESAVDCSRLSSLPIVSFTIGGKIFDLTPDQYILKVG 463 (492)
Q Consensus 384 ~~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~c~~~~~~p~~~f~~~~~~~~l~~~~y~~~~~ 463 (492)
....+.|.++|+....+|+|+|.|+|+.|.|+|++|+++..
T Consensus 237 ---------------------------------------~~~~g~~~~~C~~~~~~p~i~f~f~g~~~~i~~~~yi~~~~ 277 (340)
T 1wkr_A 237 ---------------------------------------DNNTGLLRLTTAQYANLQSLFFTIGGQTFELTANAQIWPRN 277 (340)
T ss_dssp ---------------------------------------CTTTSSEEECHHHHHTCCCEEEEETTEEEEECTGGGBCCGG
T ss_pred ---------------------------------------cCCCCeEEeeccccccCCcEEEEECCEEEEEcHHHhccccc
Confidence 11256789999987789999999999999999999998653
Q ss_pred c-----CCcceeeeceeecccCCCCCCeEEEcCC
Q 011141 464 E-----GDAAQCISGFSALDVAPPRGPLWYVYSC 492 (492)
Q Consensus 464 ~-----~~~~~C~~~~~~~~~~~~~~~~~ilg~~ 492 (492)
. +....|+++|.+.+.+.+.++.|||||+
T Consensus 278 ~~~~~g~~~~~c~~~~~~~~~~~~~~~~~iLG~~ 311 (340)
T 1wkr_A 278 LNTAIGGSASSVYLIVGDLGSDSGEGLDFINGLT 311 (340)
T ss_dssp GGGGGTCCSSCEEBCEEECSSCTTSSCCEEECHH
T ss_pred cccccCCCCceEEEEEecCCCCCCCCcceEeChH
Confidence 2 1235799999887654445678999973
No 27
>1b5f_A Protein (cardosin A); hydrolase, aspartic proteinase; HET: NAG FUC BMA MAN; 1.72A {Cynara cardunculus} SCOP: b.50.1.2
Probab=100.00 E-value=9.6e-49 Score=377.80 Aligned_cols=238 Identities=70% Similarity=1.181 Sum_probs=217.3
Q ss_pred cceEeceecCCceEEEEEEecCCCceEEEEEeCCCCCeeeeCCCCCCCccccCCCCCCCCCCCceeeCCceEEEEecCCe
Q 011141 77 ADIVALKNYMDAQYFGEIGIGTPPQNFTVIFDTGSSNLWVPSSKCYFSIACYFHSKYRSGRSSTYKKNGKSADIHYGTGA 156 (492)
Q Consensus 77 ~~~~~l~~~~~~~Y~~~i~iGtP~Q~~~v~lDTGSs~~WV~~~~C~~~~~C~~~~~y~~~~SsT~~~~~~~~~i~Yg~gs 156 (492)
...+||.|+.+.+|+++|.||||+|+|.|+|||||+++||+|..|.....|..++.|+|++|+||+..++.|.+.|++|+
T Consensus 2 ~~~~~l~n~~~~~Y~~~i~iGtP~q~~~v~~DTGSs~lWv~~~~C~~~~~C~~~~~y~~~~SsT~~~~~~~~~i~Yg~Gs 81 (239)
T 1b5f_A 2 SAVVALTNDRDTSYFGEIGIGTPPQKFTVIFDTGSSVLWVPSSKCINSKACRAHSMYESSDSSTYKENGTFGAIIYGTGS 81 (239)
T ss_dssp CEEEEEEEETTTEEEEEEEETTTTEEEEEEEETTCCCEEEEBTTCCSCHHHHTSCCBCGGGCTTCEEEEEEEEEECSSCE
T ss_pred CceeeeeecCCCEEEEEEEECCCCeEEEEEEeCCCcceEEEcCCCCCCcccCCCCCCCCccCCCeeeCCcEEEEEECCCc
Confidence 34689999999999999999999999999999999999999999954568999999999999999999999999999999
Q ss_pred eEeeEEEeEEEECceeecccEEEEEEecCCccccccccceeecCCcccccCCCCCchHHHHHhcCCCCCCeEEEEecCCC
Q 011141 157 ISGFFSEDHVKIGDLVVKDQEFIEATREPSLTFLLAKFDGILGLGFQEISVGKAVPVWYNMVNQGLVNEPVFSFWFNRNA 236 (492)
Q Consensus 157 ~~G~~~~D~v~~g~~~v~~~~fg~~~~~~~~~~~~~~~dGIlGLg~~~~s~~~~~~~~~~L~~qg~I~~~~FSl~l~~~~ 236 (492)
++|.+++|+|++++..++++.||++....+..|....++||||||++..+ .|++++|++||+|++++||+||.+..
T Consensus 82 ~~G~~~~D~v~~g~~~v~~~~fg~~~~~~~~~f~~~~~~GilGLg~~~~s----~p~~~~l~~qg~i~~~~FS~~l~~~~ 157 (239)
T 1b5f_A 82 ITGFFSQDSVTIGDLVVKEQDFIEATDEADNVFLHRLFDGILGLSFQTIS----VPVWYNMLNQGLVKERRFSFWLNRNV 157 (239)
T ss_dssp EEEEEEEEEEEETTEEEEEEEEEEEEEECHHHHTTCSCCEEEECSCCSSS----CCHHHHHHHTTCCSSSEEEEEECCSC
T ss_pred EEEEEEEEEEEECCcEEccEEEEEEEeccCccccccCcceEEecCccccc----cHHHHHHHHCCCCCCCEEEEEEeCCC
Confidence 99999999999999999999999998776544556678999999998776 67889999999999999999998864
Q ss_pred CCCCCcEEEeCcccCCCCcccceEEeccCccceEEEeceEEEcCccccccCCCceEEEcCCCCceeccHHHHHHHHHHhC
Q 011141 237 DEEEGGEIVFGGMDPDHYKGEHTYVPVTQKGYWQFDMGDVMIDGQTTGFCAGGCAAIADSGTSLLAGPTTIITQVNHAIG 316 (492)
Q Consensus 237 ~~~~~G~L~fGgiD~~~~~g~l~~~p~~~~~~w~v~l~~i~vg~~~~~~~~~~~~aiiDTGtt~i~lP~~~~~~l~~~i~ 316 (492)
+....|+|+|||+|+++|.|++.|+|+.+.++|.|.+++|.|+++.+.++..+..++|||||+++++|.+++++|+++++
T Consensus 158 ~~~~~G~l~fGg~d~~~~~g~l~~~p~~~~~~~~v~l~~i~v~~~~~~~~~~~~~aiiDTGTt~~~lP~~~~~~i~~~ig 237 (239)
T 1b5f_A 158 DEEEGGELVFGGLDPNHFRGDHTYVPVTYQYYWQFGIGDVLIGDKSTGFCAPGCQAFADSGTSLLSGPTAIVTQINHAIG 237 (239)
T ss_dssp SSSCCEEEEETSCCGGGEEEEEEEEEEEEETTEEEEECCEEETTEECCTTTTCEEEEECTTCSSEEECHHHHHHHHHHTT
T ss_pred CCCCCeEEEECCcChhhccCceEEEEcccCCeEEEEeeEEEECCEEecccCCCCEEEEecCcchhhCCHHHHHHHHHHhC
Confidence 33448999999999999999999999998899999999999999887666677899999999999999999999999998
Q ss_pred Cc
Q 011141 317 AT 318 (492)
Q Consensus 317 ~~ 318 (492)
++
T Consensus 238 a~ 239 (239)
T 1b5f_A 238 AN 239 (239)
T ss_dssp CC
T ss_pred CC
Confidence 74
No 28
>3lpj_A Beta-secretase 1; alzheimer'S, aspartyl protease, hydrolase; HET: TLA Z75; 1.79A {Homo sapiens} PDB: 3lpi_A* 3lpk_A* 3ohf_A* 3ohh_A* 3r2f_A* 3skf_A* 3skg_A* 4fse_A* 2hiz_A* 2p83_A* 2va7_A* 2va5_A* 2va6_A*
Probab=100.00 E-value=1.1e-48 Score=411.80 Aligned_cols=232 Identities=28% Similarity=0.439 Sum_probs=199.3
Q ss_pred eceecCCceEEEEEEecCCCceEEEEEeCCCCCeeeeCCCCCCCccccCCCCCCCCCCCceeeCCceEEEEecCCeeEee
Q 011141 81 ALKNYMDAQYFGEIGIGTPPQNFTVIFDTGSSNLWVPSSKCYFSIACYFHSKYRSGRSSTYKKNGKSADIHYGTGAISGF 160 (492)
Q Consensus 81 ~l~~~~~~~Y~~~i~iGtP~Q~~~v~lDTGSs~~WV~~~~C~~~~~C~~~~~y~~~~SsT~~~~~~~~~i~Yg~gs~~G~ 160 (492)
+|.+..+..|+++|+||||||+|+|+|||||+++||++..| |..++.|+|++|+||+..++.|.+.|++|++.|.
T Consensus 67 ~l~~~~~~~Y~~~i~iGTP~Q~~~v~~DTGSs~lWV~~~~c-----c~~~~~y~~~~SsT~~~~~~~~~i~Yg~Gs~~G~ 141 (455)
T 3lpj_A 67 NLRGKSGQGYYVEMTVGSPPQTLNILVDTGSSNFAVGAAPH-----PFLHRYYQRQLSSTYRDLRKGVYVPYTQGKWEGE 141 (455)
T ss_dssp CEEEETTTEEEEEEEETTTTEEEEEEEETTCCCEEEECSCC-----TTCSCCCCGGGCTTCEEEEEEEEEECSSCEEEEE
T ss_pred cccCCCCCEEEEEEEECCCCeEEEEEEcCCCcceEEecccc-----cccCCcccCCCCCCcccCCccEEEEeCCeEEEEE
Confidence 56666678999999999999999999999999999999887 6678999999999999999999999999999999
Q ss_pred EEEeEEEECc-eeec-ccEEEEEEecCCccccccccceeecCCcccccCC--CCCchHHHHHhcCCCCCCeEEEEecCCC
Q 011141 161 FSEDHVKIGD-LVVK-DQEFIEATREPSLTFLLAKFDGILGLGFQEISVG--KAVPVWYNMVNQGLVNEPVFSFWFNRNA 236 (492)
Q Consensus 161 ~~~D~v~~g~-~~v~-~~~fg~~~~~~~~~~~~~~~dGIlGLg~~~~s~~--~~~~~~~~L~~qg~I~~~~FSl~l~~~~ 236 (492)
+++|+|+|++ ..+. .+.|+++............++||||||++..+.. ...+++++|++|+.|+ ++||+||.+..
T Consensus 142 ~~~Dtv~ig~~~~~~~~~~~~~~~~~~~~~~~~~~~dGIlGLg~~~~s~~~~~~~~~~~~L~~q~~i~-~~FS~~L~~~~ 220 (455)
T 3lpj_A 142 LGTDLVSIPHGPNVTVRANIAAITESDKFFINGSNWEGILGLAYAEIARPDDSLEPFFDSLVKQTHVP-NLFSLQLCGAG 220 (455)
T ss_dssp EEEEEEECTTSCSCEEEEEEEEEEEEESCSCTTCCCCEEEECSCGGGCSSCTTSCCHHHHHHHHSCCC-SCEEEEECCCS
T ss_pred EEEEEEEECCCcceeeEEEEEEEEccCcccccCCCcceEEEeCccccccccCCCCcHHHHHHHccCCC-ceeEEEecccc
Confidence 9999999984 3332 2567877665443223457899999999988764 3789999999999997 99999998631
Q ss_pred C--------CCCCcEEEeCcccCCCCcccceEEeccCccceEEEeceEEEcCccccccC---CCceEEEcCCCCceeccH
Q 011141 237 D--------EEEGGEIVFGGMDPDHYKGEHTYVPVTQKGYWQFDMGDVMIDGQTTGFCA---GGCAAIADSGTSLLAGPT 305 (492)
Q Consensus 237 ~--------~~~~G~L~fGgiD~~~~~g~l~~~p~~~~~~w~v~l~~i~vg~~~~~~~~---~~~~aiiDTGtt~i~lP~ 305 (492)
. ....|+|+|||+|+++|.|++.|+|+.+.++|.|.+++|.|+++.+.+.. ....++|||||+++++|.
T Consensus 221 ~~~~~~~~~~~~~G~l~fGg~d~~~~~g~l~~~p~~~~~~w~v~l~~i~v~g~~~~~~~~~~~~~~aiiDSGTt~~~lP~ 300 (455)
T 3lpj_A 221 FPLNQSEVLASVGGSMIIGGIDHSLYTGSLWYTPIRREWYYEVIIVRVEINGQDLKMDCKEYNYDKSIVDSGTTNLRLPK 300 (455)
T ss_dssp SCCCHHHHHHSCCEEEEETSCCGGGEEEEEEEEECCSBTTBBCCEEEEEETTEECCCCGGGGGSSCEEECTTSSSEEEEH
T ss_pred ccccccccccCCCceEEECCcCcccccCceEEEecCCCceeEEEEeEEEECCEEccccccccCCCeEEEECCCcceeCCH
Confidence 0 22479999999999999999999999999999999999999998875422 256799999999999999
Q ss_pred HHHHHHHHHhCCc
Q 011141 306 TIITQVNHAIGAT 318 (492)
Q Consensus 306 ~~~~~l~~~i~~~ 318 (492)
+++++|++++++.
T Consensus 301 ~~~~~i~~~i~~~ 313 (455)
T 3lpj_A 301 KVFEAAVKSIKAA 313 (455)
T ss_dssp HHHHHHHHHHHHH
T ss_pred HHHHHHHHHhhhh
Confidence 9999999999775
No 29
>2ewy_A Beta-secretase 2; BACE2, aspartic protease, hydrolase; HET: DBO; 3.10A {Homo sapiens}
Probab=100.00 E-value=1.5e-47 Score=394.73 Aligned_cols=232 Identities=29% Similarity=0.490 Sum_probs=196.2
Q ss_pred eceecCCceEEEEEEecCCCceEEEEEeCCCCCeeeeCCCCCCCccccCCCCCCCCCCCceeeCCceEEEEecCCeeEee
Q 011141 81 ALKNYMDAQYFGEIGIGTPPQNFTVIFDTGSSNLWVPSSKCYFSIACYFHSKYRSGRSSTYKKNGKSADIHYGTGAISGF 160 (492)
Q Consensus 81 ~l~~~~~~~Y~~~i~iGtP~Q~~~v~lDTGSs~~WV~~~~C~~~~~C~~~~~y~~~~SsT~~~~~~~~~i~Yg~gs~~G~ 160 (492)
+|++..+.+|+++|.||||||+|.|+|||||+++||++..|. .| ++.|||++|+||+..++.|.+.|++|+++|.
T Consensus 6 ~l~~~~~~~Y~~~i~iGTP~q~~~v~~DTGSs~lWv~~~~c~---~~--~~~f~~~~SsT~~~~~~~~~i~Yg~Gs~~G~ 80 (383)
T 2ewy_A 6 NLQGDSGRGYYLEMLIGTPPQKLQILVDTGSSNFAVAGTPHS---YI--DTYFDTERSSTYRSKGFDVTVKYTQGSWTGF 80 (383)
T ss_dssp CEEEETTTEEEEEEEETTTTEEEEEEEETTCCCEEEECSCBT---TB--SCCCCGGGCTTCEEEEEEEEEECSSCEEEEE
T ss_pred eccCCCCCcEEEEEEecCCCceEEEEEecCCCceEEecCCCC---cc--ccCcccccCccceeCCceEEEEECCcEEEEE
Confidence 677777889999999999999999999999999999999884 34 6889999999999999999999999999999
Q ss_pred EEEeEEEECcee-ec-ccEEEEEEecCCccccccccceeecCCcccccC--CCCCchHHHHHhcCCCCCCeEEEEecCC-
Q 011141 161 FSEDHVKIGDLV-VK-DQEFIEATREPSLTFLLAKFDGILGLGFQEISV--GKAVPVWYNMVNQGLVNEPVFSFWFNRN- 235 (492)
Q Consensus 161 ~~~D~v~~g~~~-v~-~~~fg~~~~~~~~~~~~~~~dGIlGLg~~~~s~--~~~~~~~~~L~~qg~I~~~~FSl~l~~~- 235 (492)
+++|+|+|++.. .. .+.|++.....+.......++||||||++..+. ....+++++|++|+.| +++||+||++.
T Consensus 81 ~~~Dtv~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~dGilGLg~~~~s~~~~~~~~~~~~l~~q~~i-~~~FS~~l~~~~ 159 (383)
T 2ewy_A 81 VGEDLVTIPKGFNTSFLVNIATIFESENFFLPGIKWNGILGLAYATLAKPSSSLETFFDSLVTQANI-PNVFSMQMCGAG 159 (383)
T ss_dssp EEEEEEEETTTEEEEEEEEEEEEEEEESCSCTTCCCCEEEECSCGGGCSSCTTSCCHHHHHHHHHTC-CSCEEEEECCC-
T ss_pred EEEEEEEECCCccceeEEEEEEEEeecceeeccCcCceEEecCchhcccccccccCHHHHHHHccCC-CcceEEEeeccc
Confidence 999999998632 22 255777654433212234679999999998775 4578899999999999 79999999752
Q ss_pred ----CCCCCCcEEEeCcccCCCCcccceEEeccCccceEEEeceEEEcCccccccCC---CceEEEcCCCCceeccHHHH
Q 011141 236 ----ADEEEGGEIVFGGMDPDHYKGEHTYVPVTQKGYWQFDMGDVMIDGQTTGFCAG---GCAAIADSGTSLLAGPTTII 308 (492)
Q Consensus 236 ----~~~~~~G~L~fGgiD~~~~~g~l~~~p~~~~~~w~v~l~~i~vg~~~~~~~~~---~~~aiiDTGtt~i~lP~~~~ 308 (492)
......|+|+|||+|+++|.|++.|+|+.+..+|.|.+++|+|+++.+.+... ...++|||||+++++|.+++
T Consensus 160 ~~~~~~~~~~G~l~fGg~d~~~~~g~l~~~p~~~~~~~~v~l~~i~v~g~~~~~~~~~~~~~~aiiDSGTt~~~lP~~~~ 239 (383)
T 2ewy_A 160 LPVAGSGTNGGSLVLGGIEPSLYKGDIWYTPIKEEWYYQIEILKLEIGGQSLNLDCREYNADKAIVDSGTTLLRLPQKVF 239 (383)
T ss_dssp --------CCEEEEETSCCGGGCCSCEEEEECSSBTTBBCCEEEEEETTEECCCCTTTTTSSCEEECTTCSSEEEEHHHH
T ss_pred cccccCCCCCeEEEeCccchhhccCccEEEecCCCceEEEEEEEEEECCEEccccccccCCccEEEEcCCccccCCHHHH
Confidence 12234799999999999999999999999999999999999999987754322 46799999999999999999
Q ss_pred HHHHHHhCCc
Q 011141 309 TQVNHAIGAT 318 (492)
Q Consensus 309 ~~l~~~i~~~ 318 (492)
++|++++++.
T Consensus 240 ~~l~~~i~~~ 249 (383)
T 2ewy_A 240 DAVVEAVARA 249 (383)
T ss_dssp HHHHHHHHHT
T ss_pred HHHHHHHhhh
Confidence 9999999765
No 30
>3vf3_A Beta-secretase 1; structure-based drug design, hydrolase-hydrolase inhibitor C; HET: 0GS; 1.48A {Homo sapiens} PDB: 2f3e_A* 2f3f_A* 1ym2_A* 3dv1_A* 3dv5_A* 3k5c_A* 3k5f_A* 3k5g_A* 3pi5_A* 3qbh_A* 3duy_A* 3veu_A* 3vg1_A* 4d83_A* 4d88_A* 4d89_A* 4d8c_A* 3msk_A* 3k5d_A* 1ym4_A* ...
Probab=100.00 E-value=2.6e-47 Score=395.42 Aligned_cols=231 Identities=28% Similarity=0.446 Sum_probs=195.1
Q ss_pred ceecCCceEEEEEEecCCCceEEEEEeCCCCCeeeeCCCCCCCccccCCCCCCCCCCCceeeCCceEEEEecCCeeEeeE
Q 011141 82 LKNYMDAQYFGEIGIGTPPQNFTVIFDTGSSNLWVPSSKCYFSIACYFHSKYRSGRSSTYKKNGKSADIHYGTGAISGFF 161 (492)
Q Consensus 82 l~~~~~~~Y~~~i~iGtP~Q~~~v~lDTGSs~~WV~~~~C~~~~~C~~~~~y~~~~SsT~~~~~~~~~i~Yg~gs~~G~~ 161 (492)
|....+.+|+++|+||||||+|+|+|||||+++||++..| |..++.|+|++|+||+..++.|.+.|++|+++|.+
T Consensus 22 l~~~~~~~Y~~~i~iGTP~q~~~v~~DTGSs~lWv~~~~c-----~~~~~~y~~~~SsT~~~~~~~~~i~Yg~Gs~~G~~ 96 (402)
T 3vf3_A 22 LRGKSGQGYYVEMTVGSPPQTLNILVDTGSSNFAVGAAPH-----PFLHRYYQRQLSSTYRDLRKGVYVPYTQGKWEGEL 96 (402)
T ss_dssp EEEETTTEEEEEEEETTTTEEEEEEEETTCCCEEEECSCC-----TTCSCCCCGGGCTTCEEEEEEEEEECSSCEEEEEE
T ss_pred ccCCCCCEEEEEEEECCCCeEEEEEEeCCCCceEEccCCC-----CcccCCcCcccCcccccCCCEEEEEECcEEEEEEE
Confidence 4444567899999999999999999999999999999887 56689999999999999999999999999999999
Q ss_pred EEeEEEECc-eeecc-cEEEEEEecCCccccccccceeecCCcccccCCC--CCchHHHHHhcCCCCCCeEEEEecCCC-
Q 011141 162 SEDHVKIGD-LVVKD-QEFIEATREPSLTFLLAKFDGILGLGFQEISVGK--AVPVWYNMVNQGLVNEPVFSFWFNRNA- 236 (492)
Q Consensus 162 ~~D~v~~g~-~~v~~-~~fg~~~~~~~~~~~~~~~dGIlGLg~~~~s~~~--~~~~~~~L~~qg~I~~~~FSl~l~~~~- 236 (492)
++|+|+|++ ..+.. +.|+++............++||||||++..+... .++++++|++|+.|+ ++||+||.+..
T Consensus 97 ~~D~v~ig~~~~~~~~~~~~~~~~~~~~~~~~~~~dGIlGLg~~~~s~~~~~~~~~~~~L~~q~~i~-~~FS~~l~~~~~ 175 (402)
T 3vf3_A 97 GTDLVSIPHGPNVTVRANIAAITESDKFFINGSNWEGILGLAYAEIARPDDSLEPFFDSLVKQTHVP-NLFSLQLCGAGF 175 (402)
T ss_dssp EEEEEECTTSCSCEEEEEEEEEEEEESCSCTTCCCCEEEECSCGGGCSSCTTSCCHHHHHHHHSCCC-SCEEEEECCCC-
T ss_pred EEEEEEECCccccceeeeEEEEEccccccccCCCccceEEcCchhhcccCCcCCcHHHHHHHccCCc-cceEEEeecccc
Confidence 999999984 44443 3466666544332234578999999999887643 788999999999997 99999997531
Q ss_pred ----C---CCCCcEEEeCcccCCCCcccceEEeccCccceEEEeceEEEcCccccccC---CCceEEEcCCCCceeccHH
Q 011141 237 ----D---EEEGGEIVFGGMDPDHYKGEHTYVPVTQKGYWQFDMGDVMIDGQTTGFCA---GGCAAIADSGTSLLAGPTT 306 (492)
Q Consensus 237 ----~---~~~~G~L~fGgiD~~~~~g~l~~~p~~~~~~w~v~l~~i~vg~~~~~~~~---~~~~aiiDTGtt~i~lP~~ 306 (492)
. ....|+|+|||+|+++|.|++.|+|+.+.++|.|.+++|+|+++.+.+.. ....++|||||+++++|.+
T Consensus 176 ~~~~~~~~~~~~G~l~fGg~d~~~~~g~l~~~p~~~~~~w~v~l~~i~v~g~~~~~~~~~~~~~~aiiDSGTt~~~lP~~ 255 (402)
T 3vf3_A 176 PLNQSEVLASVGGSMIIGGIDHSLYTGSLWYTPIRREWYYEVIIVRVEINGQDLKMDCKEYNYDKSIVDSGTTNLRLPKK 255 (402)
T ss_dssp ------------EEEEESSCCGGGEEEEEEEEECSSBTTBEECEEEEEETTEECCCCGGGGGSSCEEECTTCCSEEEEHH
T ss_pred cccccccccCCCCEEEeCCcCcccccCceEEEeCCcCcEEEEEEeEEEECCEEecccccccCCCeEEEECCCCcccCCHH
Confidence 0 23479999999999999999999999999999999999999998875422 2567999999999999999
Q ss_pred HHHHHHHHhCCc
Q 011141 307 IITQVNHAIGAT 318 (492)
Q Consensus 307 ~~~~l~~~i~~~ 318 (492)
++++|++++++.
T Consensus 256 ~~~~i~~~i~~~ 267 (402)
T 3vf3_A 256 VFEAAVKSIKAA 267 (402)
T ss_dssp HHHHHHHHHHHH
T ss_pred HHHHHHHHHhhh
Confidence 999999999765
No 31
>2qp8_A Beta-secretase 1; BACE1, protease, alternative splicing, aspartyl protease, glycoprotein, hydrolase, membrane, transmembrane, zymogen; HET: TAR SC7; 1.50A {Homo sapiens} SCOP: b.50.1.2 PDB: 2qk5_A* 2qmf_A* 2qmg_A* 2qmd_A* 4djx_A* 3l59_A* 3l5b_A* 3l5c_A* 3l58_A* 3l5d_A* 3l5f_A* 4dju_A* 4djv_A* 4djw_A* 3l5e_A* 4djy_A* 2zhv_A 2zhs_A 2zhr_A 2zhu_A ...
Probab=100.00 E-value=4.9e-47 Score=392.46 Aligned_cols=232 Identities=28% Similarity=0.428 Sum_probs=195.8
Q ss_pred eceecCCceEEEEEEecCCCceEEEEEeCCCCCeeeeCCCCCCCccccCCCCCCCCCCCceeeCCceEEEEecCCeeEee
Q 011141 81 ALKNYMDAQYFGEIGIGTPPQNFTVIFDTGSSNLWVPSSKCYFSIACYFHSKYRSGRSSTYKKNGKSADIHYGTGAISGF 160 (492)
Q Consensus 81 ~l~~~~~~~Y~~~i~iGtP~Q~~~v~lDTGSs~~WV~~~~C~~~~~C~~~~~y~~~~SsT~~~~~~~~~i~Yg~gs~~G~ 160 (492)
+|++..+.+|+++|.||||+|+|.|+|||||+++||++..|. . .++.|+|++|+||+..++.|.+.|++|+++|.
T Consensus 14 ~l~~~~~~~Y~~~i~iGTP~Q~~~v~~DTGSs~lWv~~~~c~---~--~~~~y~~~~SsT~~~~~~~~~i~Yg~Gs~~G~ 88 (395)
T 2qp8_A 14 NLRGKSGQGYYVEMTVGSPPQTLNILVDTGSSNFAVGAAPHP---F--LHRYYQRQLSSTYRDLRKGVYVPYTQGKWEGE 88 (395)
T ss_dssp CEEEETTTEEEEEEEETTTTEEEEEEEETTCCCEEEECSCCT---T--CSCCCCGGGCTTCEEEEEEEEEECSSCEEEEE
T ss_pred ecCCCCCceEEEEEEecCCCceEEEEEecCCCceEEECCCCc---c--ccCCcCcccCCCceeCCceEEEEECCcEEEEE
Confidence 566666789999999999999999999999999999999884 2 36899999999999999999999999999999
Q ss_pred EEEeEEEEC-ceeec-ccEEEEEEecCCccccccccceeecCCcccccCC--CCCchHHHHHhcCCCCCCeEEEEecCCC
Q 011141 161 FSEDHVKIG-DLVVK-DQEFIEATREPSLTFLLAKFDGILGLGFQEISVG--KAVPVWYNMVNQGLVNEPVFSFWFNRNA 236 (492)
Q Consensus 161 ~~~D~v~~g-~~~v~-~~~fg~~~~~~~~~~~~~~~dGIlGLg~~~~s~~--~~~~~~~~L~~qg~I~~~~FSl~l~~~~ 236 (492)
+++|+|+|+ +..++ .+.|++.....+.......++||||||++..+.. ...+++++|++|+.|+ ++||+||++..
T Consensus 89 ~~~Dtv~ig~g~~~~~~~~~~~~~~~~~~f~~~~~~dGIlGLg~~~~s~~~~~~~~~~~~l~~q~~i~-~~FS~~L~~~~ 167 (395)
T 2qp8_A 89 LGTDLVSIPHGPNVTVRANIAAITESDKFFINGSNWEGILGLAYAEIARPDDSLEPFFDSLVKQTHVP-NLFSLQLCGAG 167 (395)
T ss_dssp EEEEEEECTTSCSCEEEEEEEEEEEEESCSCTTCCCCEEEECSCGGGCSSCTTSCCHHHHHHHHSCCC-SCEEEEECCCS
T ss_pred EEeEEEEECCCCCceEEEEEEEEEccCcccccccCccceEEcCchhhccCCCCCCCHHHHHHHccCCc-ceEEEEecccc
Confidence 999999998 55544 2556766543332112356799999999987753 5788999999999996 89999998631
Q ss_pred C--------CCCCcEEEeCcccCCCCcccceEEeccCccceEEEeceEEEcCccccccC---CCceEEEcCCCCceeccH
Q 011141 237 D--------EEEGGEIVFGGMDPDHYKGEHTYVPVTQKGYWQFDMGDVMIDGQTTGFCA---GGCAAIADSGTSLLAGPT 305 (492)
Q Consensus 237 ~--------~~~~G~L~fGgiD~~~~~g~l~~~p~~~~~~w~v~l~~i~vg~~~~~~~~---~~~~aiiDTGtt~i~lP~ 305 (492)
- ....|+|+|||+|+++|.|++.|+|+.+..+|.|.+++|+|+++.+.+.. ....++|||||+++++|.
T Consensus 168 ~~~~~~~~~~~~~G~l~fGg~d~~~~~g~l~~~p~~~~~~~~v~l~~i~v~g~~~~~~~~~~~~~~aiiDSGTt~~~lP~ 247 (395)
T 2qp8_A 168 FPLNQSEVLASVGGSMIIGGIDHSLYTGSLWYTPIRREWYYEVIIVRVEINGQDLKMDCKEYNYDKSIVDSGTTNLRLPK 247 (395)
T ss_dssp SCCCHHHHHHSCCEEEEETSCCGGGEEEEEEEEECCSBTTBBCCEEEEEETTEECCCCGGGGGSSCEEECTTCCSEEEEH
T ss_pred ccccccccccCCCcEEEECCcCcccccCceEEeccCCCceEEEEEEEEEECCEEcccCccccCCceEEEEcCCCcEecCH
Confidence 0 12479999999999999999999999999999999999999998765322 246799999999999999
Q ss_pred HHHHHHHHHhCCc
Q 011141 306 TIITQVNHAIGAT 318 (492)
Q Consensus 306 ~~~~~l~~~i~~~ 318 (492)
+++++|++++++.
T Consensus 248 ~~~~~l~~~i~~~ 260 (395)
T 2qp8_A 248 KVFEAAVKSIKAA 260 (395)
T ss_dssp HHHHHHHHHHHHH
T ss_pred HHHHHHHHHHhhh
Confidence 9999999999765
No 32
>3aup_A SBG7S, BG, basic 7S globulin; pepsin-like fold, plant protein; 1.91A {Glycine max}
Probab=100.00 E-value=3.6e-46 Score=386.84 Aligned_cols=303 Identities=15% Similarity=0.221 Sum_probs=236.2
Q ss_pred cceEece-ecCCceEEEEEEecCCCceEEEEEeCCCCCeeeeCC-----------CCCCCccccCCCCC------CCCCC
Q 011141 77 ADIVALK-NYMDAQYFGEIGIGTPPQNFTVIFDTGSSNLWVPSS-----------KCYFSIACYFHSKY------RSGRS 138 (492)
Q Consensus 77 ~~~~~l~-~~~~~~Y~~~i~iGtP~Q~~~v~lDTGSs~~WV~~~-----------~C~~~~~C~~~~~y------~~~~S 138 (492)
...+||. |+.+.+|+++|.||||||+|.|+|||||+++||+|. .|. ...|..++.| ++..|
T Consensus 9 ~~~~pl~~~~~~~~Y~~~i~iGTP~Q~~~v~~DTGSs~lWv~~~~~~~Sst~~~~~C~-s~~C~~~~~~~c~~c~~~~~s 87 (403)
T 3aup_A 9 LVVLPVQNDGSTGLHWANLQKRTPLMQVPVLVDLNGNHLWVNCEQQYSSKTYQAPFCH-STQCSRANTHQCLSCPAASRP 87 (403)
T ss_dssp CEEEEEEECTTTCCEEEEEEETTTTEEEEEEEETTCSSEEEECSSCCCCSSCBCCCTT-BHHHHHTTCCCEEECSSSCBT
T ss_pred cEEEeeecCCCCceEEEEEECCCCCceeEEEEECCCCceeECCCCCCCCCCCCccCCC-CccccCccccCccccCCCCCC
Confidence 4458999 888999999999999999999999999999999999 664 4568777777 55554
Q ss_pred CceeeCCceEEEEec-CCe-eEeeEEEeEEEECc-----------eeecccEEEEEEecCCccccccccceeecCCcccc
Q 011141 139 STYKKNGKSADIHYG-TGA-ISGFFSEDHVKIGD-----------LVVKDQEFIEATREPSLTFLLAKFDGILGLGFQEI 205 (492)
Q Consensus 139 sT~~~~~~~~~i~Yg-~gs-~~G~~~~D~v~~g~-----------~~v~~~~fg~~~~~~~~~~~~~~~dGIlGLg~~~~ 205 (492)
+ +....+.|.+.|+ +|+ +.|.+++|+|+|++ ..++++.||++.......+....++||||||++..
T Consensus 88 ~-~~~~~~~~~~~Y~~d~~~~~G~~~~Dtv~ig~~~g~~~~~~~~~~v~~~~Fg~~~~~~~~~~~~~~~dGIlGLg~~~~ 166 (403)
T 3aup_A 88 G-CHKNTCGLMSTNPITQQTGLGELGEDVLAIHATQGSTQQLGPLVTVPQFLFSCAPSFLVQKGLPRNTQGVAGLGHAPI 166 (403)
T ss_dssp T-BCSSEEEEEEEETTTTEEEEEEEEEEEEEEEECCC----CCCEEEEEEEEEEEECGGGGSSSSSTTCCEEEECSSSTT
T ss_pred C-CCCCcceeEeecCCCCceeeEEEEEEEEEecccCCccccccccccccCEEEECCcccccccCCCCCCceEEECCCCCc
Confidence 3 4556789999998 554 89999999999998 88999999999875432133457899999999876
Q ss_pred cCCCCCchHHHHHhcCCCCCCeEEEEecCCCCCCCCcEEEeCcccCCCC--c-c-----cceEEeccCc--cceEEEece
Q 011141 206 SVGKAVPVWYNMVNQGLVNEPVFSFWFNRNADEEEGGEIVFGGMDPDHY--K-G-----EHTYVPVTQK--GYWQFDMGD 275 (492)
Q Consensus 206 s~~~~~~~~~~L~~qg~I~~~~FSl~l~~~~~~~~~G~L~fGgiD~~~~--~-g-----~l~~~p~~~~--~~w~v~l~~ 275 (492)
+ +..+|. ++.+.+++||+||.+.. ...|+|+||| |+++| . | ++.|+|+... ++|.|.+++
T Consensus 167 s------~~~ql~-~~~~~~~~FS~~L~~~~--~~~G~l~fGg-d~~~~~~~~G~~~~~~l~~~Pl~~~~~~~y~v~l~~ 236 (403)
T 3aup_A 167 S------LPNQLA-SHFGLQRQFTTCLSRYP--TSKGAIIFGD-APNNMRQFQNQDIFHDLAFTPLTITLQGEYNVRVNS 236 (403)
T ss_dssp S------HHHHHH-HHHTCCSEEEEECCSCT--TSCEEEEESC-HHHHC--CTTCCTTTTEEEEECEECTTSCEEECEEE
T ss_pred C------HHHHHH-hhcCCCCeEEEEcCCCC--CCCeeEEECC-CchhccccccccccCceeecccccCCCCcceEEEEE
Confidence 5 555664 55577899999998752 2379999999 99888 5 6 9999999776 899999999
Q ss_pred EEEcCccc-cccCC--------CceEEEcCCCCceeccHHHHHHHHHHhCCccccccccchhhcchhHHHHHHhhcccCc
Q 011141 276 VMIDGQTT-GFCAG--------GCAAIADSGTSLLAGPTTIITQVNHAIGATGIVSQECKAVVSQYGEEIINMLLAKDEP 346 (492)
Q Consensus 276 i~vg~~~~-~~~~~--------~~~aiiDTGtt~i~lP~~~~~~l~~~i~~~~~~~~~C~~~~~~y~~~~~~~~~~~~~~ 346 (492)
|+|+++.+ .+... ...+||||||+++++|.+++++|++++.+... .
T Consensus 237 i~v~g~~~~~~~~~~~~~~~~g~~~aiiDSGTt~~~lp~~~~~~l~~~i~~~~~----------------------~--- 291 (403)
T 3aup_A 237 IRINQHSVFPLNKISSTIVGSTSGGTMISTSTPHMVLQQSVYQAFTQVFAQQLP----------------------K--- 291 (403)
T ss_dssp EEETTEEEECC------------CCEEECSSCSSEEECHHHHHHHHHHHHHTSC----------------------G---
T ss_pred EEECCEEcccCChhHeeeccCCCCCEEEECCCccEEeCHHHHHHHHHHHHHHhc----------------------c---
Confidence 99999876 43221 23499999999999999999999999954300 0
Q ss_pred ccccccccccccCCCCcccccccccccccCCCCCCCCCcccCchhHHHHHHHHHHHhhhchHHHHHHHHHhhcccCCCCC
Q 011141 347 QKICSQIGLCTFDGSRGVSMGIESVVPENNHRASGGFHDAMCSTCEMAVVWMQNQLKQNQTQERILNYVNELCDRLPSPM 426 (492)
Q Consensus 347 ~~~c~~~~~C~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~c~~~~~~~ 426 (492)
.+.+ + +...
T Consensus 292 ---------------------~~~~-~-------------------------------------------------~~~~ 300 (403)
T 3aup_A 292 ---------------------QAQV-K-------------------------------------------------SVAP 300 (403)
T ss_dssp ---------------------GGEE-C-------------------------------------------------CCTT
T ss_pred ---------------------cccc-C-------------------------------------------------CCCC
Confidence 0000 0 0012
Q ss_pred CceeeeCccCCCCCcEEEEECC---EEEeeCcCcceEEeCcCCcceeeeceeecccCCCCCCeEEEcCC
Q 011141 427 GESAVDCSRLSSLPIVSFTIGG---KIFDLTPDQYILKVGEGDAAQCISGFSALDVAPPRGPLWYVYSC 492 (492)
Q Consensus 427 ~~~~~~c~~~~~~p~~~f~~~~---~~~~l~~~~y~~~~~~~~~~~C~~~~~~~~~~~~~~~~~ilg~~ 492 (492)
..|.++|+.+..+|+|+|+|+| +.|+|+|++|+++..+ ...|+ +|+..+.. .++.|||||+
T Consensus 301 ~~~c~~c~~~~~~P~i~f~f~g~~~~~~~l~~~~y~~~~~~--~~~C~-~~~~~~~~--~~~~~ILG~~ 364 (403)
T 3aup_A 301 FGLCFNSNKINAYPSVDLVMDKPNGPVWRISGEDLMVQAQP--GVTCL-GVMNGGMQ--PRAEITLGAR 364 (403)
T ss_dssp CSCEECGGGCCCCCCEEEEESSTTCCEEEECHHHHEEEC-----CEEE-CEEECCSC--CSSSEEECHH
T ss_pred CCceEECCCcCcCCcEEEEEcCCCceEEEEcccceEEEcCC--CeEEE-EEEcCCCC--CCCcEEEChH
Confidence 2477899988899999999987 4999999999998653 35799 89886632 2468999984
No 33
>3vla_A EDGP; extracellular, inhibitor, plant protein; HET: NAG; 0.95A {Daucus carota} PDB: 3vlb_A
Probab=100.00 E-value=5.4e-46 Score=385.86 Aligned_cols=233 Identities=18% Similarity=0.217 Sum_probs=190.3
Q ss_pred CcceEecee-cCCceEEEEEEecCCCceEEEEEeCCCCCeeeeCCCCCC----------CccccCCCCCCCCC-----CC
Q 011141 76 DADIVALKN-YMDAQYFGEIGIGTPPQNFTVIFDTGSSNLWVPSSKCYF----------SIACYFHSKYRSGR-----SS 139 (492)
Q Consensus 76 ~~~~~~l~~-~~~~~Y~~~i~iGtP~Q~~~v~lDTGSs~~WV~~~~C~~----------~~~C~~~~~y~~~~-----Ss 139 (492)
....+|++. ..+.+|+++|.||||||+|.|++||||+++||+|..|.. +..|..++.|++.. ++
T Consensus 7 ~~~~~pv~~d~~~~~Y~~~i~iGTPpq~~~v~~DTGS~~lWv~c~~c~~Sst~~~v~C~s~~C~~~~~~~~~~c~s~~~~ 86 (413)
T 3vla_A 7 SALVVPVKKDASTLQYVTTINQRTPLVSENLVVDLGGRFLWVDCDQNYVSSTYRPVRCRTSQCSLSGSIACGDCFNGPRP 86 (413)
T ss_dssp SEEEEEEEECTTTCCEEEEEEETTTTEEEEEEEETTCSSEEEECSSSCCCTTCEECBTTSHHHHHTTCCEEECCSSCCBT
T ss_pred ccEEEEeeecCCCCeEEEEEEcCCCCcceEEEEeCCChhhhcccCCCCCCCCcCccCCCcccccccccCCCcccccCCCC
Confidence 345577774 457889999999999999999999999999999965421 44677777787642 34
Q ss_pred ceeeCCceEEEEec-CCe-eEeeEEEeEEEEC---------ceeecccEEEEEEecCCccccccccceeecCCcccccCC
Q 011141 140 TYKKNGKSADIHYG-TGA-ISGFFSEDHVKIG---------DLVVKDQEFIEATREPSLTFLLAKFDGILGLGFQEISVG 208 (492)
Q Consensus 140 T~~~~~~~~~i~Yg-~gs-~~G~~~~D~v~~g---------~~~v~~~~fg~~~~~~~~~~~~~~~dGIlGLg~~~~s~~ 208 (492)
++....|.|.+.|+ +|+ +.|.+++|+|+|+ ++.++++.|||+....... ....++||||||++.++
T Consensus 87 ~c~~~~c~~~i~Y~~d~~~~~G~l~~Dtv~l~~~~g~~~~~~~~v~~~~FGc~~~~~~~g-~~~~~dGIlGLg~~~lS-- 163 (413)
T 3vla_A 87 GCNNNTCGVFPENPVINTATGGEVAEDVVSVESTDGSSSGRVVTVPRFIFSCAPTSLLQN-LASGVVGMAGLGRTRIA-- 163 (413)
T ss_dssp TBCSSEEEECCEETTTTEECCEEEEEEEEEEEEECSSBEEEEEEEEEEEEEEECGGGGTT-SCTTCCEEEECSSSSSS--
T ss_pred CCCCCcCcceeecCcCCceeeeEEEEEEEEecccCCCCcccceeeCCEEEECcccccccC-cccccccccccCCCCcc--
Confidence 56666799999995 654 7999999999997 3688899999998753211 23568999999999877
Q ss_pred CCCchHHHHHhcCCCCCCeEEEEecCCCCCCCCcEEEeCcccCCC-----Cccc-ceEEeccCc--------------cc
Q 011141 209 KAVPVWYNMVNQGLVNEPVFSFWFNRNADEEEGGEIVFGGMDPDH-----YKGE-HTYVPVTQK--------------GY 268 (492)
Q Consensus 209 ~~~~~~~~L~~qg~I~~~~FSl~l~~~~~~~~~G~L~fGgiD~~~-----~~g~-l~~~p~~~~--------------~~ 268 (492)
+..+|.+|+.| +++||+||.+.. ..+|+|+|||+|..+ |.|+ +.|+|+... .+
T Consensus 164 ----l~sql~~~~~i-~~~FS~cL~~~~--~~~G~l~fGg~~~~~~p~~~~~g~~l~~tPl~~~~~~~~~~~~~~~~~~~ 236 (413)
T 3vla_A 164 ----LPSQFASAFSF-KRKFAMCLSGST--SSNSVIIFGNDPYTFLPNIIVSDKTLTYTPLLTNPVSTSATSTQGEPSVE 236 (413)
T ss_dssp ----HHHHHHHHHTC-CSEEEEECCSCS--SSCEEEEEESCCEEETTTEEECTTTSEEEECBCCSSCCSSSCCTTCCCCS
T ss_pred ----hHHHHhhhcCC-CceEEEeCCCCC--CCceEEEECCCcccccccccccCCceeEeecccCCccccccccccCCCce
Confidence 77889999988 899999998842 247999999998753 7888 999999764 69
Q ss_pred eEEEeceEEEcCccccccC--------CCceEEEcCCCCceeccHHHHHHHHHHhCCc
Q 011141 269 WQFDMGDVMIDGQTTGFCA--------GGCAAIADSGTSLLAGPTTIITQVNHAIGAT 318 (492)
Q Consensus 269 w~v~l~~i~vg~~~~~~~~--------~~~~aiiDTGtt~i~lP~~~~~~l~~~i~~~ 318 (492)
|.|.+++|+||++.+.++. .++.+||||||++++||.++|++|.++|++.
T Consensus 237 y~V~l~~IsVgg~~l~~~~~~~~~~~~g~~~aIiDSGTslt~lp~~~y~~l~~a~~~~ 294 (413)
T 3vla_A 237 YFIGVKSIKINSKIVALNTSLLSISSAGLGGTKISTINPYTVLETSIYKAVTEAFIKE 294 (413)
T ss_dssp CEECCCEEEETTEEECCCGGGTSBCTTSCBCEEECSSSSSEEEEHHHHHHHHHHHHHH
T ss_pred EEEEEEEEEECCEEccCCchhcccccCCCCCEEEECCCCcEEcCHHHHHHHHHHHHHH
Confidence 9999999999999876432 3578999999999999999999999998664
No 34
>1t6e_X Xylanase inhibitor; two beta-barrel domain structure, hydrolase inhibitor; 1.70A {Triticum aestivum} SCOP: b.50.1.2 PDB: 1t6g_A 2b42_A 3hd8_A
Probab=100.00 E-value=9.7e-43 Score=358.50 Aligned_cols=222 Identities=12% Similarity=0.152 Sum_probs=175.4
Q ss_pred eEece-ecCCceEEEEEEecCCCceEEEEEeCCCCCeeeeCCCCC-------CCccccCCCCCCCCCCCcee-------e
Q 011141 79 IVALK-NYMDAQYFGEIGIGTPPQNFTVIFDTGSSNLWVPSSKCY-------FSIACYFHSKYRSGRSSTYK-------K 143 (492)
Q Consensus 79 ~~~l~-~~~~~~Y~~~i~iGtP~Q~~~v~lDTGSs~~WV~~~~C~-------~~~~C~~~~~y~~~~SsT~~-------~ 143 (492)
.+||. ++.+.+|+++|.|||| |+|||||+++||+|..|. .+..|..++.|++.. .++. .
T Consensus 4 ~~pv~~~~~~~~Y~~~i~iGtP-----v~~DTGSs~lWv~c~~~~~~~~~~C~s~~C~~~~~~~~~s-c~~~~~~~~~~~ 77 (381)
T 1t6e_X 4 LAPVTKDPATSLYTIPFHDGAS-----LVLDVAGPLVWSTCDGGQPPAEIPCSSPTCLLANAYPAPG-CPAPSCGSDKHD 77 (381)
T ss_dssp EEEEEECTTTCCEEEEEETTEE-----EEEETTCCCEEECCCTTCCCCCCBTTSHHHHHHHSSCCTT-CCCCCC------
T ss_pred EEeEEecCCCcEEEEEEeCCCE-----EEEECCCCceEEeCCCCCCCCccCCCCchhccccCCCCCC-CCCccCCcCcCC
Confidence 46777 7788999999999997 999999999999995442 134566667787753 3332 1
Q ss_pred CCc-eEEEEecCCee-EeeEEEeEEEECc----eeeccc----EEEEEEecCCccccccccceeecCCcccccCCCCCch
Q 011141 144 NGK-SADIHYGTGAI-SGFFSEDHVKIGD----LVVKDQ----EFIEATREPSLTFLLAKFDGILGLGFQEISVGKAVPV 213 (492)
Q Consensus 144 ~~~-~~~i~Yg~gs~-~G~~~~D~v~~g~----~~v~~~----~fg~~~~~~~~~~~~~~~dGIlGLg~~~~s~~~~~~~ 213 (492)
..| .|.+.|++|+. +|.+++|+|++++ ..++++ .|||+.......+ ...++||||||++.++ +
T Consensus 78 ~~c~~f~i~YgdGs~~~G~l~~Dtv~ig~~~g~~~v~~~~~~~~Fg~~~~~~~~~~-~~~~dGIlGLg~~~~s------~ 150 (381)
T 1t6e_X 78 KPCTAYPYNPVSGACAAGSLSHTRFVANTTDGSKPVSKVNVGVLAACAPSKLLASL-PRGSTGVAGLANSGLA------L 150 (381)
T ss_dssp CBCEECCBCTTTCCBCCEEEEEEEEEEEEESSSSEEEEEEEEEEEEECCGGGGTTS-CTTEEEEEECSSSTTS------H
T ss_pred CccccccccccCCceeeEEEEEEEEEeeccCCCccccceeeeeEeecCcccccCCC-CCCCceEEEeCCCcch------h
Confidence 234 59999999984 8999999999985 566665 5699876522222 3578999999998776 6
Q ss_pred HHHHHhcCCCCCCeEEEEecCCCCCCCCcEEEeCcccCC--CCcccceEEeccCc---cceEEEeceEEEcCccccccCC
Q 011141 214 WYNMVNQGLVNEPVFSFWFNRNADEEEGGEIVFGGMDPD--HYKGEHTYVPVTQK---GYWQFDMGDVMIDGQTTGFCAG 288 (492)
Q Consensus 214 ~~~L~~qg~I~~~~FSl~l~~~~~~~~~G~L~fGgiD~~--~~~g~l~~~p~~~~---~~w~v~l~~i~vg~~~~~~~~~ 288 (492)
..+|.+|+++ +++||+||.+. .+|+|+|||+|.. +|.|++.|+|+... .+|.|.+++|+||++.+.++..
T Consensus 151 ~~ql~~~~~~-~~~FS~~L~~~----~~G~l~fGg~~~~~~~~~g~l~~tPl~~~~~~~~y~v~l~~i~vg~~~~~~~~~ 225 (381)
T 1t6e_X 151 PAQVASAQKV-ANRFLLCLPTG----GPGVAIFGGGPVPWPQFTQSMPYTPLVTKGGSPAHYISARSIVVGDTRVPVPEG 225 (381)
T ss_dssp HHHHHHHHTC-CSEEEEECCSS----SCEEEEESCCSCSCHHHHTTCCEEECBCCTTCCSCEECEEEEEETTEECCCCTT
T ss_pred HHHHhhhccc-CceEEEEeCCC----CCeeEEeCCcccccccccCcceeeccccCCCCcceEEEEEEEEEcCEEecCCHH
Confidence 6789998854 89999999875 2799999998765 47899999999763 4677999999999988764433
Q ss_pred ---CceEEEcCCCCceeccHHHHHHHHHHhCCc
Q 011141 289 ---GCAAIADSGTSLLAGPTTIITQVNHAIGAT 318 (492)
Q Consensus 289 ---~~~aiiDTGtt~i~lP~~~~~~l~~~i~~~ 318 (492)
.+.+||||||+++++|++++++|.+++.+.
T Consensus 226 ~~~~~~~iiDTGTtl~~lp~~~~~~l~~~~~~~ 258 (381)
T 1t6e_X 226 ALATGGVMLSTRLPYVLLRPDVYRPLMDAFTKA 258 (381)
T ss_dssp CSCTTCEEECSSCSSEEECHHHHHHHHHHHHHH
T ss_pred HccCCCEEEECCCccEEeCHHHHHHHHHHHHHh
Confidence 356999999999999999999999988654
No 35
>1lya_B Cathepsin D; lysosomal aspartic protease; HET: NAG BMA MAN; 2.50A {Homo sapiens} SCOP: b.50.1.2 PDB: 1lyb_B* 1lyw_B*
Probab=100.00 E-value=1.8e-37 Score=299.35 Aligned_cols=219 Identities=42% Similarity=0.855 Sum_probs=191.4
Q ss_pred CceeecccEEEEEEecCCccccccccceeecCCcccccCCCCCchHHHHHhcCCCCCCeEEEEecCCCCCCCCcEEEeCc
Q 011141 169 GDLVVKDQEFIEATREPSLTFLLAKFDGILGLGFQEISVGKAVPVWYNMVNQGLVNEPVFSFWFNRNADEEEGGEIVFGG 248 (492)
Q Consensus 169 g~~~v~~~~fg~~~~~~~~~~~~~~~dGIlGLg~~~~s~~~~~~~~~~L~~qg~I~~~~FSl~l~~~~~~~~~G~L~fGg 248 (492)
|++++++|.||+++...+..|....++||||||++..+.....|++++|++||+|++++||+||.+..+....|+|+|||
T Consensus 1 gg~~v~~~~Fg~~~~~~~~~f~~~~~dGilGLg~~~~s~~~~~~~~~~l~~qg~i~~~~FS~~l~~~~~~~~~G~l~fGg 80 (241)
T 1lya_B 1 GGVKVERQVFGEATKQPGITFIAAKFDGILGMAYPRISVNNVLPVFDNLMQQKLVDQNIFSFYLSRDPDAQPGGELMLGG 80 (241)
T ss_dssp CCEEEEEEEEEEEEECCSSTTTSCSSSEEEECSCGGGCGGGCCCHHHHHHHTTCSSSSEEEEEECSSTTCSSCEEEEETS
T ss_pred CCeEECCeEEEEEEEccCCccccccCCEEEECCcchhhccCCChHHHHHHHCCCCCCCEEEEEEeCCCCCCCCcEEEECC
Confidence 57889999999999876655666788999999999888777889999999999999999999998874333479999999
Q ss_pred ccCCCCcccceEEeccCccceEEEeceEEEcCccccccCCCceEEEcCCCCceeccHHHHHHHHHHhCCccccccccchh
Q 011141 249 MDPDHYKGEHTYVPVTQKGYWQFDMGDVMIDGQTTGFCAGGCAAIADSGTSLLAGPTTIITQVNHAIGATGIVSQECKAV 328 (492)
Q Consensus 249 iD~~~~~g~l~~~p~~~~~~w~v~l~~i~vg~~~~~~~~~~~~aiiDTGtt~i~lP~~~~~~l~~~i~~~~~~~~~C~~~ 328 (492)
+|+++|.|++.|+|+.+.++|.|.+++|+|+++.+. +..+..+++||||+++++|.+++++|++++++..
T Consensus 81 ~d~~~~~g~l~~~p~~~~~~~~v~l~~i~v~~~~~~-~~~~~~aiiDSGTt~~~lP~~~~~~l~~~~~~~~--------- 150 (241)
T 1lya_B 81 TDSKYYKGSLSYLNVTRKAYWQVHLDQVEVASGLTL-CKEGCEAIVDTGTSLMVGPVDEVRELQKAIGAVP--------- 150 (241)
T ss_dssp CCGGGEEEEEEEEECSSBTTBEEEEEEEEETTSCEE-STTCEEEEECTTCSSEEECHHHHHHHHHHHTCEE---------
T ss_pred cCHHHcCCceEEEECccccEEEEEEeEEEECCeeEe-ccCCCEEEEECCCccccCCHHHHHHHHHHhCCee---------
Confidence 999999999999999999999999999999998752 4567899999999999999999999999997651
Q ss_pred hcchhHHHHHHhhcccCcccccccccccccCCCCcccccccccccccCCCCCCCCCcccCchhHHHHHHHHHHHhhhchH
Q 011141 329 VSQYGEEIINMLLAKDEPQKICSQIGLCTFDGSRGVSMGIESVVPENNHRASGGFHDAMCSTCEMAVVWMQNQLKQNQTQ 408 (492)
Q Consensus 329 ~~~y~~~~~~~~~~~~~~~~~c~~~~~C~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~ 408 (492)
T Consensus 151 -------------------------------------------------------------------------------- 150 (241)
T 1lya_B 151 -------------------------------------------------------------------------------- 150 (241)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred HHHHHHHHhhcccCCCCCCceeeeCccCCCCCcEEEEECCEEEeeCcCcceEEeCcCCcceeeeceeecccCCCCCCeEE
Q 011141 409 ERILNYVNELCDRLPSPMGESAVDCSRLSSLPIVSFTIGGKIFDLTPDQYILKVGEGDAAQCISGFSALDVAPPRGPLWY 488 (492)
Q Consensus 409 ~~~~~~~~~~c~~~~~~~~~~~~~c~~~~~~p~~~f~~~~~~~~l~~~~y~~~~~~~~~~~C~~~~~~~~~~~~~~~~~i 488 (492)
...+.|.++|+....+|+|+|+|+|++|+|+|++|+++..+.+...|+++|++.+.+.+.++.||
T Consensus 151 ---------------~~~g~~~~~C~~~~~~p~i~f~f~g~~~~l~~~~y~~~~~~~~~~~C~~~~~~~~~~~~~~~~~i 215 (241)
T 1lya_B 151 ---------------LIQGEYMIPCEKVSTLPAITLKLGGKGYKLSPEDYTLKVSQAGKTLCLSGFMGMDIPPPSGPLWI 215 (241)
T ss_dssp ---------------EETTEEEEEGGGGGGSCCEEEEETTEEEEECTTTSEEEETTTTSSEEEESEEECCCCTTTCCCEE
T ss_pred ---------------ccCCcEEEECCCCccCCeEEEEECCEEEEECHHHhEEEccCCCCCeeEEEEEecccCCCCCCeEE
Confidence 11457899999888999999999999999999999999765445689999999886655667899
Q ss_pred EcCC
Q 011141 489 VYSC 492 (492)
Q Consensus 489 lg~~ 492 (492)
|||+
T Consensus 216 lG~~ 219 (241)
T 1lya_B 216 LGDV 219 (241)
T ss_dssp ECHH
T ss_pred echH
Confidence 9974
No 36
>1lya_A Cathepsin D; lysosomal aspartic protease; HET: NAG BMA MAN; 2.50A {Homo sapiens} SCOP: b.50.1.2 PDB: 1lyb_A* 1lyw_A*
Probab=99.90 E-value=1e-23 Score=173.32 Aligned_cols=93 Identities=66% Similarity=1.122 Sum_probs=86.9
Q ss_pred ceEeceecCCceEEEEEEecCCCceEEEEEeCCCCCeeeeCCCCCC-CccccCCCCCCCCCCCceeeCCceEEEEecCCe
Q 011141 78 DIVALKNYMDAQYFGEIGIGTPPQNFTVIFDTGSSNLWVPSSKCYF-SIACYFHSKYRSGRSSTYKKNGKSADIHYGTGA 156 (492)
Q Consensus 78 ~~~~l~~~~~~~Y~~~i~iGtP~Q~~~v~lDTGSs~~WV~~~~C~~-~~~C~~~~~y~~~~SsT~~~~~~~~~i~Yg~gs 156 (492)
..+||.|+.+.+|+++|.||||||+|.|+|||||+++||++..|.. ...|..++.|+|++|+||+..++.|.+.|++|+
T Consensus 3 ~~~~l~n~~~~~Y~~~i~iGTP~Q~~~v~~DTGSs~lWv~~~~C~~~~~~C~~~~~y~p~~SsT~~~~~~~~~i~Yg~Gs 82 (97)
T 1lya_A 3 IPEVLKNYMDAQYYGEIGIGTPPQCFTVVFDTGSSNLWVPSIHCKLLDIACWIHHKYNSDKSSTYVKNGTSFDIHYGSGS 82 (97)
T ss_dssp EEEEEEEETTTEEEEEEEETTTTEEEEEEEETTCCCEEEEBTTCCTTCHHHHTSCCBCGGGCTTCEEEEEEEEEECSSCE
T ss_pred ceEeeEECCCCeEEEEEEECCCCeEEEEEEeCCCCceEEeEcCccCcccccCCCCCCCchhCCCceeCCCcEEEEECCcE
Confidence 3589999999999999999999999999999999999999999952 247998999999999999999999999999999
Q ss_pred eEeeEEEeEEEECc
Q 011141 157 ISGFFSEDHVKIGD 170 (492)
Q Consensus 157 ~~G~~~~D~v~~g~ 170 (492)
+.|.+++|+|+|++
T Consensus 83 ~~G~~~~Dtv~i~g 96 (97)
T 1lya_A 83 LSGYLSQDTVSVPC 96 (97)
T ss_dssp EEEEEEEEEEEESC
T ss_pred EEEEEEEEEEEECC
Confidence 99999999999986
No 37
>3rfi_A Asp; PSI, saposin, hydrolase; 1.90A {Solanum tuberosum}
Probab=99.69 E-value=4e-18 Score=142.42 Aligned_cols=107 Identities=50% Similarity=0.909 Sum_probs=77.9
Q ss_pred CCccccccccchhhcchhHHHHHHhhcccCcccccccccccccCCCCcccccccccccccCCCCCCCCCcccCchhHHHH
Q 011141 316 GATGIVSQECKAVVSQYGEEIINMLLAKDEPQKICSQIGLCTFDGSRGVSMGIESVVPENNHRASGGFHDAMCSTCEMAV 395 (492)
Q Consensus 316 ~~~~~~~~~C~~~~~~y~~~~~~~~~~~~~~~~~c~~~~~C~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~c~~~~~~~ 395 (492)
||.+.++.+|+.++..|++.++++++....|..+|...|+|...+....++++++++++.+..++ ..++.+|.+|+|++
T Consensus 2 ~a~g~~~~~C~~~V~~Y~~~ii~~l~~~~~P~~iC~~lglC~~~~~~~~~~~i~~vv~~~~~~~~-~~~~~~C~~Ce~~V 80 (108)
T 3rfi_A 2 SAMAIVSMECKTIVSQYGEMIWDLLVSGVRPDQVCSQAGLCFVDGAQHVSSNIKTVVERETEGSS-VGEAPLCTACEMAV 80 (108)
T ss_dssp ---CHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHTTSSCC-------------------------CCHHHHHHHHHH
T ss_pred CCCchHHHHHHHHHHHHHHHHHHHHHhcCCHHHHHHHcCCcCCCccccccccccccccccccccc-CCCCCcChhHHHHH
Confidence 45677888999999999999999999999999999999999999888777778887776532222 24799999999999
Q ss_pred HHHHHHHhhhchHHHHHHHHHhhcccCC
Q 011141 396 VWMQNQLKQNQTQERILNYVNELCDRLP 423 (492)
Q Consensus 396 ~~~~~~~~~~~~~~~~~~~~~~~c~~~~ 423 (492)
+|+|++|.+|.|+++|+++|+++|+++|
T Consensus 81 ~~ie~~L~~N~Te~eI~~~l~k~C~~LP 108 (108)
T 3rfi_A 81 VWMQNQLKQEGTKEKVLEYVNQLCEKIP 108 (108)
T ss_dssp HHHHHHHTSHHHHHHHHHHHHHHHTTCC
T ss_pred HHHHHHHhcCchHHHHHHHHHHHHhhCc
Confidence 9999999999999999999999999987
No 38
>1b5f_B Protein (cardosin A); hydrolase, aspartic proteinase; HET: NAG FUC BMA MAN; 1.72A {Cynara cardunculus} SCOP: b.50.1.2
Probab=99.30 E-value=1.6e-12 Score=104.36 Aligned_cols=65 Identities=63% Similarity=1.080 Sum_probs=56.9
Q ss_pred CceeeeCccCCCCCcEEEEECCEEEeeCcCcceEEeCcCCcceeeeceeecccCCCCCCeEEEcCC
Q 011141 427 GESAVDCSRLSSLPIVSFTIGGKIFDLTPDQYILKVGEGDAAQCISGFSALDVAPPRGPLWYVYSC 492 (492)
Q Consensus 427 ~~~~~~c~~~~~~p~~~f~~~~~~~~l~~~~y~~~~~~~~~~~C~~~~~~~~~~~~~~~~~ilg~~ 492 (492)
|.|.+||+.++++|+|+|+|+|++|+|+|++|+++..+.+...|+++|++.+.+ +.++.|||||+
T Consensus 1 G~y~v~C~~~~~~P~i~f~~gg~~~~l~~~~yi~~~~~~~~~~C~~~~~~~~~~-~~~~~~ILGd~ 65 (87)
T 1b5f_B 1 EELQVDCNTLSSMPNVSFTIGGKKFGLTPEQYILKVGKGEATQCISGFTAMDAT-LLGPLWILGDV 65 (87)
T ss_dssp CCCEECGGGGGGCCCEEEEETTEEEEECHHHHEEEESCTTTCEEEESEEECCCB-SSSBEEEECHH
T ss_pred CcEEEECCCCCcCCcEEEEECCEEEEECHHHhEEEccCCCCCEEEEEEEECCCC-CCCCeEEechH
Confidence 679999999889999999999999999999999987655456899999998765 45679999984
No 39
>3bqp_A Proactivator polypeptide; saposin, sphingolipid activator protein, lipid binding protein, acid ceramidase,farber disease, lipid metabolism; 1.30A {Homo sapiens} PDB: 3bqq_C 2rb3_A 2r1q_A 2r0r_A
Probab=97.94 E-value=4.3e-06 Score=65.18 Aligned_cols=48 Identities=27% Similarity=0.652 Sum_probs=42.8
Q ss_pred cccCchhHHHHHHHHHHHhhhchHHHHHHHHHhhcccCCCCCCceeeeCcc
Q 011141 385 DAMCSTCEMAVVWMQNQLKQNQTQERILNYVNELCDRLPSPMGESAVDCSR 435 (492)
Q Consensus 385 ~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~c~~ 435 (492)
+..|.+|++++++++++|.+|.|+++|.++++++|+++|.+ +...|..
T Consensus 2 ~~~C~~C~~~v~~i~~~l~~~~t~~~I~~~l~~~C~~lp~~---~~~~C~~ 49 (80)
T 3bqp_A 2 GGFCEVCKKLVGYLDRNLEKNSTKQEILAALEKGCSFLPDP---YQKQCDQ 49 (80)
T ss_dssp CTTHHHHHHHHHHHHHHSCTTCCHHHHHHHHHHHGGGSCGG---GHHHHHH
T ss_pred cCcchhHHHHHHHHHHHHHcccHHHHHHHHHHHHHHhCCCc---cchhhHH
Confidence 67899999999999999999999999999999999999974 3456653
No 40
>2qyp_A Proactivator polypeptide; saposin, activator protein, alternative splicing, disease mutation, gaucher disease, glycoprotein, GM2- gangliosidosis; 2.45A {Homo sapiens} SCOP: a.64.1.1 PDB: 2z9a_A
Probab=97.94 E-value=2e-06 Score=69.05 Aligned_cols=49 Identities=27% Similarity=0.700 Sum_probs=43.5
Q ss_pred CcccCchhHHHHHHHHHHHhhhchHHHHHHHHHhhcccCCCCCCceeeeCcc
Q 011141 384 HDAMCSTCEMAVVWMQNQLKQNQTQERILNYVNELCDRLPSPMGESAVDCSR 435 (492)
Q Consensus 384 ~~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~c~~ 435 (492)
++..|.+|++++.+++++|.+|.|+++|.++++++|+++|.+. ...|..
T Consensus 4 ~~~~C~~C~~vv~~i~~~l~~n~t~~~I~~~l~~~C~~lp~~~---~~~C~~ 52 (91)
T 2qyp_A 4 SDVYCEVCEFLVKEVTKLIDNNKTEKEILDAFDKMCSKLPKSL---SEECQE 52 (91)
T ss_dssp CHHHHHHHHHHHHHHHHHHTSHHHHHHHHHHHHHHHHTSCSST---TTTHHH
T ss_pred CCCcchHHHHHHHHHHHHHhcCCcHHHHHHHHHHHHHHCCCCc---ccchHH
Confidence 5788999999999999999999999999999999999999753 336653
No 41
>1l9l_A Granulysin; saposin fold, membrane-lytic, antimicrobial protein; HET: MPO; 0.92A {Homo sapiens} SCOP: a.64.1.1
Probab=97.80 E-value=8.9e-06 Score=62.35 Aligned_cols=40 Identities=20% Similarity=0.245 Sum_probs=37.3
Q ss_pred cccCchhHHHHHHHHHHHhhhchHHHHHHHHHhhcccCCCC
Q 011141 385 DAMCSTCEMAVVWMQNQLKQNQTQERILNYVNELCDRLPSP 425 (492)
Q Consensus 385 ~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~c~~~~~~ 425 (492)
|..|.+|++++..+++.| +|.|+++|+..++++|+++|.+
T Consensus 1 ~~~C~~C~~~v~~le~~l-~n~Te~~I~~~L~~vC~~l~~~ 40 (74)
T 1l9l_A 1 GRDYRTCLTIVQKLKKMV-DKPTQRSVSNAATRVCRTGRSR 40 (74)
T ss_dssp CHHHHHHHHHHHHHHHHC-SSCCHHHHHHHHHHGGGSSCHH
T ss_pred CCCChHHHHHHHHHHHHh-cccCHHHHHHHHHHHHHhCChH
Confidence 457999999999999999 9999999999999999999863
No 42
>4ddj_A Saposin-A, protein A; saposin fold, sphingolipid activator protein, galactosylcera lauryldimethylamine-N-oxide, lipid, detergent, lysosome; HET: LDA; 1.90A {Homo sapiens} PDB: 2dob_A*
Probab=97.80 E-value=1.1e-05 Score=63.48 Aligned_cols=41 Identities=39% Similarity=0.711 Sum_probs=38.9
Q ss_pred cccCchhHHHHHHHHHHHhhhchHHHHHHHHHhhcccCCCC
Q 011141 385 DAMCSTCEMAVVWMQNQLKQNQTQERILNYVNELCDRLPSP 425 (492)
Q Consensus 385 ~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~c~~~~~~ 425 (492)
+..|.+|++++.+++++|.+|.|+++|+++++++|+++|.+
T Consensus 3 ~~~C~~C~~~v~~~~~~l~~n~t~~~I~~~l~~~C~~lp~~ 43 (83)
T 4ddj_A 3 SLPCDICKDVVTAAGDMLKDNATEEEILVYLEKTCDWLPKP 43 (83)
T ss_dssp CHHHHHHHHHHHHHHHHHHSTTHHHHHHHHHHHHHTTSCTT
T ss_pred CCcchHHHHHHHHHHHHHHcCccHHHHHHHHHHHHHhCCCc
Confidence 45799999999999999999999999999999999999975
No 43
>1nkl_A NK-lysin; saposin fold, antibacterial peptide, tumourolytic peptide; NMR {Sus scrofa} SCOP: a.64.1.1
Probab=97.73 E-value=1.2e-05 Score=62.52 Aligned_cols=40 Identities=13% Similarity=0.478 Sum_probs=38.1
Q ss_pred cccCchhHHHHHHHHHHHhhhchHHHHHHHHHhhcccCCC
Q 011141 385 DAMCSTCEMAVVWMQNQLKQNQTQERILNYVNELCDRLPS 424 (492)
Q Consensus 385 ~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~c~~~~~ 424 (492)
|..|.+|++++.++++.+.+|.|+++|.++|+++|+++|.
T Consensus 1 g~~C~~C~~iv~~ve~~l~~~~t~~~I~~~l~~~C~~lp~ 40 (78)
T 1nkl_A 1 GYFCESCRKIIQKLEDMVGPQPNEDTVTQAASQVCDKLKI 40 (78)
T ss_dssp CCHHHHHHHHHHHHHHHHCSSCCHHHHHHHHHHHHHHSCS
T ss_pred CCcchHHHHHHHHHHHHHHcCCcHHHHHHHHHHHHhhCch
Confidence 4679999999999999999999999999999999999986
No 44
>1of9_A Pore-forming peptide ameobapore A; toxin, saplip, amoebapore A; NMR {Entamoeba histolytica} SCOP: a.64.1.4
Probab=97.71 E-value=1.5e-05 Score=61.72 Aligned_cols=41 Identities=17% Similarity=0.566 Sum_probs=38.3
Q ss_pred cccCchhHHHHHHHHHHHhhhchHHHHHHHHHhhcccCCCCC
Q 011141 385 DAMCSTCEMAVVWMQNQLKQNQTQERILNYVNELCDRLPSPM 426 (492)
Q Consensus 385 ~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~c~~~~~~~ 426 (492)
+..|.+|+++++++++.|.+| |+++|.++|+++|+++|++.
T Consensus 2 ~~~C~~C~~vv~~ve~~l~~n-t~~~I~~~l~~~C~~lp~~~ 42 (77)
T 1of9_A 2 EILCNLCTGLINTLENLLTTK-GADKVKDYISSLCNKASGFI 42 (77)
T ss_dssp CSSHHHHHHHHHHHHHHCSSS-CSHHHHHHHHHHHTTCSSTT
T ss_pred CCcchhHHHHHHHHHHHHHHC-cHHHHHHHHHHHHHcCChHH
Confidence 568999999999999999999 99999999999999998653
No 45
>2gtg_A Proactivator polypeptide; saposin, sphingolipid activator protein, lipid-binding prote binding protein; 2.40A {Homo sapiens} SCOP: a.64.1.1 PDB: 1m12_A 1sn6_A
Probab=97.64 E-value=3.1e-05 Score=60.81 Aligned_cols=41 Identities=29% Similarity=0.696 Sum_probs=38.7
Q ss_pred CcccCchhHHHHHHHHHHHhhhchHHHHHHHHHhhcccCCC
Q 011141 384 HDAMCSTCEMAVVWMQNQLKQNQTQERILNYVNELCDRLPS 424 (492)
Q Consensus 384 ~~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~c~~~~~ 424 (492)
++..|.+|++++.++++.|.+|.|+++|.++++++|+.+|.
T Consensus 3 ~~~~C~~C~~~v~~i~~~l~~~~t~~~I~~~l~~~C~~lp~ 43 (83)
T 2gtg_A 3 SDVYCEVCEFLVKEVTKLIDNNKTEKEILDAFDKMCSKLPK 43 (83)
T ss_dssp -CCHHHHHHHHHHHHHHHHHTTCCHHHHHHHHHHHTTSSCH
T ss_pred CCCcChhHHHHHHHHHHHHHcCCcHHHHHHHHHHHHHHCCC
Confidence 47789999999999999999999999999999999999995
No 46
>1n69_A Saposin B; lipid binding protein, glycosphingolipid activator protein; HET: PEH; 2.20A {Homo sapiens} SCOP: a.64.1.3
Probab=97.55 E-value=4.2e-05 Score=59.80 Aligned_cols=42 Identities=29% Similarity=0.510 Sum_probs=38.9
Q ss_pred CcccCchhHHHHHHHHHHHhhhchH-HHHHHHHHhhcccCCCC
Q 011141 384 HDAMCSTCEMAVVWMQNQLKQNQTQ-ERILNYVNELCDRLPSP 425 (492)
Q Consensus 384 ~~~~c~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~c~~~~~~ 425 (492)
++..|..|++++..+++.|.+|.|+ ++|.++++++|+++|+.
T Consensus 2 ~~~~C~~C~~~V~~ve~~l~~n~t~~~~I~~~l~~~C~~lp~~ 44 (81)
T 1n69_A 2 DGDVCQDCIQMVTDIQTAVRTNSTFVQALVEHVKEECDRLGPG 44 (81)
T ss_dssp -CHHHHHHHHHHHHHHHHHHHCTTHHHHHHHHHHHHGGGGCTT
T ss_pred CCCcchHHHHHHHHHHHHHHhCCcHHHHHHHHHHHHHHHcCcH
Confidence 3678999999999999999999999 99999999999999964
No 47
>2js9_A Saposin-like protein family protein 5; caenopore-5, saposin-like fold, antimicrobial protein; NMR {Caenorhabditis elegans} PDB: 2jsa_A
Probab=97.32 E-value=2.4e-05 Score=63.50 Aligned_cols=51 Identities=16% Similarity=0.327 Sum_probs=43.3
Q ss_pred CCcccCchhHHHHHHHHHHHhhhchHHHHHHHHHhhcccCCCCCCceeeeCcc
Q 011141 383 FHDAMCSTCEMAVVWMQNQLKQNQTQERILNYVNELCDRLPSPMGESAVDCSR 435 (492)
Q Consensus 383 ~~~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~c~~ 435 (492)
.++..|.+|++++.++++.| |.|+++|++.|+++|+++|.+...+.-.|..
T Consensus 19 ~~~~~C~~C~~vV~~ve~~l--n~t~~~I~~~L~~~C~~lp~~ipf~~~~C~~ 69 (99)
T 2js9_A 19 RSALSCQMCELVVKKYEGSA--DKDANVIKKDFDAECKKLFHTIPFGTRECDH 69 (99)
T ss_dssp CCSSTHHHHHHHHHHHTTTS--SCCHHHHHHHHHHHHHTGGGGSTTHHHHHHT
T ss_pred CCCCcchhHHHHHHHHHHHH--HhhHHHHHHHHHHHHHcCCCcchHHHHHHHH
Confidence 45889999999999999999 8899999999999999999653334456765
No 48
>2qyp_A Proactivator polypeptide; saposin, activator protein, alternative splicing, disease mutation, gaucher disease, glycoprotein, GM2- gangliosidosis; 2.45A {Homo sapiens} SCOP: a.64.1.1 PDB: 2z9a_A
Probab=94.02 E-value=0.026 Score=44.63 Aligned_cols=41 Identities=37% Similarity=0.781 Sum_probs=34.8
Q ss_pred cccccchhhcchhHHHHHHhhcccCcccccccccccccCCC
Q 011141 321 VSQECKAVVSQYGEEIINMLLAKDEPQKICSQIGLCTFDGS 361 (492)
Q Consensus 321 ~~~~C~~~~~~y~~~~~~~~~~~~~~~~~c~~~~~C~~~~~ 361 (492)
+..+|+.++..|++.+++++.+...|+.+|..+++|..+..
T Consensus 46 ~~~~C~~~V~~y~~~ii~~l~~~~~P~~iC~~l~lC~~~~~ 86 (91)
T 2qyp_A 46 LSEECQEVVDTYGSSILSILLEEVSPELVCSMLHLCSGTRH 86 (91)
T ss_dssp TTTTHHHHHHHHHHHHHHHHHHTCCHHHHHHTTTCC-----
T ss_pred cccchHHHHHHHHHHHHHHHHHcCCHHHHHhhcCCCCCccc
Confidence 67899999999999999999999999999999999997654
No 49
>2i1a_A DNA damage-inducible protein DDI1; acid protease fold, dimer, retroviral protease domain, protein turnover; HET: DNA; 2.30A {Saccharomyces cerevisiae}
Probab=93.61 E-value=0.11 Score=44.90 Aligned_cols=96 Identities=17% Similarity=0.171 Sum_probs=52.9
Q ss_pred eceecCCceEEEEEEecCCCceEEEEEeCCCCCeeeeCCCCCCCccccCCCCCCCCCCCceeeCCceEEEEecCCe--eE
Q 011141 81 ALKNYMDAQYFGEIGIGTPPQNFTVIFDTGSSNLWVPSSKCYFSIACYFHSKYRSGRSSTYKKNGKSADIHYGTGA--IS 158 (492)
Q Consensus 81 ~l~~~~~~~Y~~~i~iGtP~Q~~~v~lDTGSs~~WV~~~~C~~~~~C~~~~~y~~~~SsT~~~~~~~~~i~Yg~gs--~~ 158 (492)
|..-..+..+++++.|+ ++++++++|||++.+.+... +. ..++-....+. .+. ....|.|. ..
T Consensus 18 p~~~~~~~~~~v~v~In--G~~~~~LvDTGAs~s~is~~-~a--~~lgl~~~~~~----~~~------~~a~g~g~~~~~ 82 (148)
T 2i1a_A 18 PEMFTQVPMLYINIEIN--NYPVKAFVDTGAQTTIMSTR-LA--KKTGLSRMIDK----RFI------GEARGVGTGKII 82 (148)
T ss_dssp -----CCCCCEEEEEET--TEEEEEEECTTCSSCEEEHH-HH--HHHTGGGGCBC----CCC-----------------C
T ss_pred chhhcccceEEEEEEEC--CEEEEEEEECCCCccccCHH-HH--HHcCCCccCCc----ceE------EEEecCCCcccc
Confidence 43333456789999998 68999999999999888532 21 11111111111 010 01122222 34
Q ss_pred eeEEEeEEEECceeecccEEEEEEecCCccccccccceeecCC
Q 011141 159 GFFSEDHVKIGDLVVKDQEFIEATREPSLTFLLAKFDGILGLG 201 (492)
Q Consensus 159 G~~~~D~v~~g~~~v~~~~fg~~~~~~~~~~~~~~~dGIlGLg 201 (492)
|.+..+.+.+|+...+ ..|.+.. .+.+||||+.
T Consensus 83 ~~~~~~~i~ig~~~~~-~~~~vl~---------~~~d~iLG~d 115 (148)
T 2i1a_A 83 GRIHQAQVKIETQYIP-CSFTVLD---------TDIDVLIGLD 115 (148)
T ss_dssp EEEEEEEEEETTEEEE-EEEEEEC---------SSCSEEECHH
T ss_pred cEEEEEEEEECCEEec-eeEEEec---------CCCCeEecHH
Confidence 6667789999998764 5555433 1358999986
No 50
>3bqp_A Proactivator polypeptide; saposin, sphingolipid activator protein, lipid binding protein, acid ceramidase,farber disease, lipid metabolism; 1.30A {Homo sapiens} PDB: 3bqq_C 2rb3_A 2r1q_A 2r0r_A
Probab=92.99 E-value=0.044 Score=41.89 Aligned_cols=37 Identities=27% Similarity=0.707 Sum_probs=35.1
Q ss_pred cccccchhhcchhHHHHHHhhcccCcccccccccccc
Q 011141 321 VSQECKAVVSQYGEEIINMLLAKDEPQKICSQIGLCT 357 (492)
Q Consensus 321 ~~~~C~~~~~~y~~~~~~~~~~~~~~~~~c~~~~~C~ 357 (492)
+...|+.++..|++.+++++.....|+.+|..+|+|.
T Consensus 43 ~~~~C~~~v~~y~~~ii~~l~~~~~P~~iC~~l~~C~ 79 (80)
T 3bqp_A 43 YQKQCDQFVAEYEPVLIEILVEVMDPSFVCLKIGACP 79 (80)
T ss_dssp GHHHHHHHHHHHHHHHHHHHTTCCCHHHHHHHTTSSC
T ss_pred cchhhHHHHHHHHHHHHHHHHHCCCHHHHHhhcCCCC
Confidence 6788999999999999999999999999999999995
No 51
>2js9_A Saposin-like protein family protein 5; caenopore-5, saposin-like fold, antimicrobial protein; NMR {Caenorhabditis elegans} PDB: 2jsa_A
Probab=92.52 E-value=0.032 Score=44.91 Aligned_cols=38 Identities=24% Similarity=0.551 Sum_probs=35.6
Q ss_pred ccccccchhhcchhHHHHHHhhcccCcccccccccccc
Q 011141 320 IVSQECKAVVSQYGEEIINMLLAKDEPQKICSQIGLCT 357 (492)
Q Consensus 320 ~~~~~C~~~~~~y~~~~~~~~~~~~~~~~~c~~~~~C~ 357 (492)
++...|+.++..|++.+++++.....|+.+|..+++|+
T Consensus 62 f~~~~C~~~V~~y~~~II~~L~~~~~P~~VC~~L~lC~ 99 (99)
T 2js9_A 62 FGTRECDHYVNSKVDPIIHELEGGTAPKDVCTKLNECP 99 (99)
T ss_dssp THHHHHHTTTTTTHHHHHHHHHHTCCTTHHHHHTTCCC
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhCCCHHHHHhhcCCCC
Confidence 36788999999999999999999999999999999995
No 52
>1nkl_A NK-lysin; saposin fold, antibacterial peptide, tumourolytic peptide; NMR {Sus scrofa} SCOP: a.64.1.1
Probab=91.84 E-value=0.07 Score=40.84 Aligned_cols=37 Identities=27% Similarity=0.582 Sum_probs=35.3
Q ss_pred cccccchhhcchhHHHHHHhhcccCcccccccccccc
Q 011141 321 VSQECKAVVSQYGEEIINMLLAKDEPQKICSQIGLCT 357 (492)
Q Consensus 321 ~~~~C~~~~~~y~~~~~~~~~~~~~~~~~c~~~~~C~ 357 (492)
+...|+.++..|++.+++++..+..|+.+|..+++|.
T Consensus 41 ~~~~C~~~V~~y~~~iI~~l~~~~~P~~IC~~l~lC~ 77 (78)
T 1nkl_A 41 LRGLCKKIMRSFLRRISWDILTGKKPQAICVDIKICK 77 (78)
T ss_dssp THHHHHHHHHHHHHHHHHHHHTTCCHHHHHHHTTCSC
T ss_pred hHHHHHHHHHHHHHHHHHHHHHCCCHHHHHhccCCCC
Confidence 6788999999999999999999999999999999995
No 53
>2gtg_A Proactivator polypeptide; saposin, sphingolipid activator protein, lipid-binding prote binding protein; 2.40A {Homo sapiens} SCOP: a.64.1.1 PDB: 1m12_A 1sn6_A
Probab=91.26 E-value=0.04 Score=42.63 Aligned_cols=38 Identities=39% Similarity=0.853 Sum_probs=35.0
Q ss_pred cccccchhhcchhHHHHHHhhcccCccccccccccccc
Q 011141 321 VSQECKAVVSQYGEEIINMLLAKDEPQKICSQIGLCTF 358 (492)
Q Consensus 321 ~~~~C~~~~~~y~~~~~~~~~~~~~~~~~c~~~~~C~~ 358 (492)
+...|+.++..|++.+++++.+...|..+|..+|+|.-
T Consensus 45 ~~~~C~~~V~~y~~~ii~~l~~~~~P~~iC~~l~lC~~ 82 (83)
T 2gtg_A 45 LSEECQEVVDTYGSSILSILLEEVSPELVCSMLHLCSG 82 (83)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHTTCCHHHHHHHTTSCC-
T ss_pred chhHHHHHHHHHHHHHHHHHHHCCCHHHHHHhcCCCCC
Confidence 56789999999999999999999999999999999963
No 54
>1of9_A Pore-forming peptide ameobapore A; toxin, saplip, amoebapore A; NMR {Entamoeba histolytica} SCOP: a.64.1.4
Probab=90.84 E-value=0.037 Score=42.31 Aligned_cols=38 Identities=24% Similarity=0.556 Sum_probs=35.1
Q ss_pred cccccccchhhcchhHHHHHHhhcccCccccccccccc
Q 011141 319 GIVSQECKAVVSQYGEEIINMLLAKDEPQKICSQIGLC 356 (492)
Q Consensus 319 ~~~~~~C~~~~~~y~~~~~~~~~~~~~~~~~c~~~~~C 356 (492)
+.+...|+.++..|++.+++++..+..|+.+|..+++|
T Consensus 40 ~~~~~~C~~~V~~y~~~iI~~l~~~~~P~~IC~~l~lC 77 (77)
T 1of9_A 40 GFIATLCTKVLDFGIDKLIQLIEDKVDANAICAKIHAC 77 (77)
T ss_dssp STTHHHHHHHHHHCHHHHHHHHHHTCCHHHHHHHHSCC
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHhCCCHHHHHhhcCCC
Confidence 34677899999999999999999999999999999998
No 55
>3s8i_A Protein DDI1 homolog 1; protease, structural genomics, structural genomics consortiu retropepsin-like domain, protein turnover, hydrolase; 1.70A {Homo sapiens}
Probab=88.80 E-value=0.59 Score=40.36 Aligned_cols=91 Identities=16% Similarity=0.261 Sum_probs=54.0
Q ss_pred CceEEEEEEecCCCceEEEEEeCCCCCeeeeCCCCCCCccccCCCCCCCCCCCceeeCCceEEEEecCC--eeEeeEEEe
Q 011141 87 DAQYFGEIGIGTPPQNFTVIFDTGSSNLWVPSSKCYFSIACYFHSKYRSGRSSTYKKNGKSADIHYGTG--AISGFFSED 164 (492)
Q Consensus 87 ~~~Y~~~i~iGtP~Q~~~v~lDTGSs~~WV~~~~C~~~~~C~~~~~y~~~~SsT~~~~~~~~~i~Yg~g--s~~G~~~~D 164 (492)
-..|++++.|+ ++++++++|||++.+.+.. .|. ..|+-...-+. . +. ....+-| .+.|.+...
T Consensus 22 ~~~l~v~~~In--g~~v~~LVDTGAs~s~Is~-~~A--~rlGL~~~~~~-~---~~------~~a~g~G~~~~~g~v~~~ 86 (148)
T 3s8i_A 22 VTMLYINCKVN--GHPLKAFVDSGAQMTIMSQ-ACA--ERCNIMRLVDR-R---WA------GVAKGVGTQRIIGRVHLA 86 (148)
T ss_dssp CCCCEEEEEET--TEEEEEEECTTCSSCEEEH-HHH--HHTTCGGGEEG-G---GC------EECCC---CEEEEEEEEE
T ss_pred cCEEEEEEEEC--CEEEEEEEeCCCCcEeeCH-HHH--HHcCCccccCc-c---ee------EEEEcCCccEEEEEEEEE
Confidence 34689999998 6999999999999998854 331 12221110000 0 00 0112222 246777788
Q ss_pred EEEECceeecccEEEEEEecCCccccccccceeecCC
Q 011141 165 HVKIGDLVVKDQEFIEATREPSLTFLLAKFDGILGLG 201 (492)
Q Consensus 165 ~v~~g~~~v~~~~fg~~~~~~~~~~~~~~~dGIlGLg 201 (492)
.+.+|+..++ ..|.+.. ....++|||+-
T Consensus 87 ~I~Ig~~~~~-~~~~Vle--------~~~~d~LLGmD 114 (148)
T 3s8i_A 87 QIQIEGDFLQ-CSFSILE--------DQPMDMLLGLD 114 (148)
T ss_dssp EEEETTEEEE-EEEEEET--------TCSSSEEECHH
T ss_pred EEEECCEEEE-EEEEEeC--------CCCcCeeccHH
Confidence 9999997653 4444432 12358999986
No 56
>4ddj_A Saposin-A, protein A; saposin fold, sphingolipid activator protein, galactosylcera lauryldimethylamine-N-oxide, lipid, detergent, lysosome; HET: LDA; 1.90A {Homo sapiens} PDB: 2dob_A*
Probab=88.02 E-value=0.089 Score=40.62 Aligned_cols=37 Identities=30% Similarity=0.761 Sum_probs=34.1
Q ss_pred cccccchhhcchhHHHHHHhhcc-cCcccccccccccc
Q 011141 321 VSQECKAVVSQYGEEIINMLLAK-DEPQKICSQIGLCT 357 (492)
Q Consensus 321 ~~~~C~~~~~~y~~~~~~~~~~~-~~~~~~c~~~~~C~ 357 (492)
+...|+..+..|++.+++++..+ ..|+.+|...|+|.
T Consensus 45 ~~~~C~~~v~~y~~~ii~~l~~~~~~p~~vC~~l~lC~ 82 (83)
T 4ddj_A 45 MSASCKEIVDSYLPVILDIIKGEMSRPGEVCSALNLCE 82 (83)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHTCHHHHHHHTTSCC
T ss_pred hhHHHHHHHHHHHHHHHHHHHHccCCHHHHHhHcCCCC
Confidence 46789999999999999999998 48999999999995
No 57
>1n69_A Saposin B; lipid binding protein, glycosphingolipid activator protein; HET: PEH; 2.20A {Homo sapiens} SCOP: a.64.1.3
Probab=87.73 E-value=0.1 Score=40.14 Aligned_cols=37 Identities=35% Similarity=0.796 Sum_probs=31.6
Q ss_pred ccccccchhhcchhHHHHHHhhcccCcccccccccccc
Q 011141 320 IVSQECKAVVSQYGEEIINMLLAKDEPQKICSQIGLCT 357 (492)
Q Consensus 320 ~~~~~C~~~~~~y~~~~~~~~~~~~~~~~~c~~~~~C~ 357 (492)
.+...|+.++.+|++.+++++. +..|+.+|...|+|.
T Consensus 44 ~~~~~C~~~V~~y~~~ii~~l~-~~~P~~iC~~lglC~ 80 (81)
T 1n69_A 44 GMADICKNYISQYSEIAIQMMM-HMQPKEICALVGFCD 80 (81)
T ss_dssp THHHHHHHHHHHHHHHHHHHHT-TSCHHHHHHHTTSCC
T ss_pred HHHHHHHHHHHHHHHHHHHHHh-cCCHHHHHhhcCCCC
Confidence 3678899999999997666555 789999999999995
No 58
>1l9l_A Granulysin; saposin fold, membrane-lytic, antimicrobial protein; HET: MPO; 0.92A {Homo sapiens} SCOP: a.64.1.1
Probab=85.78 E-value=0.18 Score=38.13 Aligned_cols=33 Identities=24% Similarity=0.590 Sum_probs=30.6
Q ss_pred cccccchhhcchhHHHHHHhhcccCcccccccc
Q 011141 321 VSQECKAVVSQYGEEIINMLLAKDEPQKICSQI 353 (492)
Q Consensus 321 ~~~~C~~~~~~y~~~~~~~~~~~~~~~~~c~~~ 353 (492)
+...|+.++..|+++++++++++..|..+|..+
T Consensus 41 ~~~~C~~~V~~y~~~Ii~~L~~~~~P~~IC~~i 73 (74)
T 1l9l_A 41 WRDVCRNFMRRYQSRVIQGLVAGETAQQICEDL 73 (74)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHTTCCHHHHHGGG
T ss_pred HHHHHHHHHHHHHHHHHHHHHhCCCHHHHHhhc
Confidence 677899999999999999999999999999864
No 59
>3s64_A AC-SLP-1, saposin-like protein 1; lipid-binding, lipid binding protein; HET: CIT EPE; 2.30A {Ancylostoma caninum}
Probab=83.68 E-value=0.13 Score=40.07 Aligned_cols=40 Identities=18% Similarity=0.296 Sum_probs=34.5
Q ss_pred CCcccCchhHHHHHHHHHHHhhhchHHHHHHHHHhhcccCCC
Q 011141 383 FHDAMCSTCEMAVVWMQNQLKQNQTQERILNYVNELCDRLPS 424 (492)
Q Consensus 383 ~~~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~c~~~~~ 424 (492)
.+...|.+|++++..++..+.++++ +|++.|...|+++++
T Consensus 8 ~~~l~C~~C~~~Vk~~e~~i~~~~~--eie~~~d~~Ckk~~~ 47 (87)
T 3s64_A 8 SNVIVCEICKMAVKLIVPEADKDLD--QLEKEFIQGCMTLIG 47 (87)
T ss_dssp CCTTHHHHHHHHHHHHTTCSSCSST--THHHHHHHHHHHHHC
T ss_pred CCccchHHHHHHHHHHHHhccCCHH--HHHHHHHHHHHHhcc
Confidence 4568899999999999999987555 699999999998854
No 60
>3vcm_P Prorenin; aspartic proteases, hydrolase; HET: NAG; 2.93A {Homo sapiens}
Probab=81.26 E-value=1 Score=30.02 Aligned_cols=25 Identities=20% Similarity=0.030 Sum_probs=20.8
Q ss_pred ceEEEeccccCcchhhhhhhccccc
Q 011141 29 GLYRIGLKKRKFDLNNRVAARLDSK 53 (492)
Q Consensus 29 ~~~~ipL~~~~~~~~~~~~~~~~~~ 53 (492)
+++||||+|.++.++.+.+.+....
T Consensus 7 ~l~RIPL~k~kS~R~~l~e~g~~~~ 31 (43)
T 3vcm_P 7 TFKRIFLKRMPSIRESLKERGVDMA 31 (43)
T ss_dssp CCEEEEEEECCCHHHHHHHHTCCGG
T ss_pred ceeEEeeeecccHHHHHHHcCchHH
Confidence 5789999999999999988775443
No 61
>2hs1_A HIV-1 protease; ultra-high resolution active site surface binding site, HYDR; HET: 017; 0.84A {Human immunodeficiency virus 1} PDB: 3nu4_A* 3tl9_A* 3tkw_A* 3tkg_A* 3ndu_A* 3ndt_A* 3k4v_A* 3a2o_A* 1fgc_C* 2a1e_A* 2aod_A* 2aoi_A* 2aoj_A* 2hb3_A* 2ien_A* 1sdt_A* 2z4o_A* 2zye_A* 2nmw_A* 3b7v_A* ...
Probab=76.74 E-value=3.1 Score=33.11 Aligned_cols=30 Identities=23% Similarity=0.258 Sum_probs=25.4
Q ss_pred EEEEEEecCCCceEEEEEeCCCCCeeeeCCCC
Q 011141 90 YFGEIGIGTPPQNFTVIFDTGSSNLWVPSSKC 121 (492)
Q Consensus 90 Y~~~i~iGtP~Q~~~v~lDTGSs~~WV~~~~C 121 (492)
=++.|.|| +|.+.+++|||.+++-+....+
T Consensus 9 P~vtvkI~--Gq~~eaLLDTGAD~TVl~~~~~ 38 (99)
T 2hs1_A 9 PLVTIKIG--GQLKEALLDTGADDTIIEEMSL 38 (99)
T ss_dssp CEEEEEET--TEEEEEEECTTCSSEEESCCSS
T ss_pred CEEEEEEC--CEEEEEEeccCCCcEEEecccC
Confidence 35779999 6999999999999999876555
No 62
>1fmb_A EIAV protease; hydrolase (acid proteinase), RNA-directed DNA polymerase, AS protease, endonuclease, polyprotein; HET: HYB; 1.80A {Equine infectious anemia virus} SCOP: b.50.1.1 PDB: 2fmb_A*
Probab=74.31 E-value=3.2 Score=33.40 Aligned_cols=27 Identities=19% Similarity=0.220 Sum_probs=23.7
Q ss_pred EEEEEEecCCCceEEEEEeCCCCCeeeeC
Q 011141 90 YFGEIGIGTPPQNFTVIFDTGSSNLWVPS 118 (492)
Q Consensus 90 Y~~~i~iGtP~Q~~~v~lDTGSs~~WV~~ 118 (492)
-++.|.|| +|.+.+++|||.+++-+..
T Consensus 9 P~v~v~I~--Gq~~e~LLDTGAD~TVl~~ 35 (104)
T 1fmb_A 9 PTTIVLIN--DTPLNVLLDTGADTSVLTT 35 (104)
T ss_dssp CEEEEEET--TEEEEEEECTTCSSCEEEH
T ss_pred CEEEEEEC--CEEEEEEeccCCCcEEEcc
Confidence 46789999 6999999999999998873
No 63
>3ec0_A Protease; HIV-2, inhibitor, hydrolase; HET: GRL; 1.18A {Human immunodeficiency virus type 2} SCOP: b.50.1.1 PDB: 1hii_A* 1hsi_A 1hsh_A* 1idb_A* 1jld_A* 2mip_A 1ida_A* 3ebz_A* 3ecg_A* 3s45_A* 4upj_A* 1ivq_A* 1ivp_A 2hpf_A 3upj_A* 2hpe_A* 5upj_A* 6upj_A* 1sip_A 1tcw_A* ...
Probab=71.26 E-value=4.8 Score=31.99 Aligned_cols=29 Identities=24% Similarity=0.223 Sum_probs=24.8
Q ss_pred EEEEEecCCCceEEEEEeCCCCCeeeeCCCC
Q 011141 91 FGEIGIGTPPQNFTVIFDTGSSNLWVPSSKC 121 (492)
Q Consensus 91 ~~~i~iGtP~Q~~~v~lDTGSs~~WV~~~~C 121 (492)
++.|.|| +|.+.+++|||.+++-+...++
T Consensus 10 ~vti~I~--Gq~~e~LLDTGAD~TVl~~~~~ 38 (99)
T 3ec0_A 10 VVTAYIE--GQPVEVLLDTGADDSIVAGIEL 38 (99)
T ss_dssp EEEEEET--TEEEEEEECTTCSSCEESSCCC
T ss_pred eEEEEEC--CEEEEEEEecCCCceEEcCccc
Confidence 6779999 6999999999999999865544
No 64
>3liy_A Protease; hydrolase, hydrolase-hydrolase inhibitor complex; HET: STA; 1.86A {Human t-lymphotropic virus 1} PDB: 2b7f_A* 3liq_A* 3lit_A* 3liv_A* 3lix_A* 3lin_A*
Probab=68.18 E-value=4.8 Score=32.76 Aligned_cols=32 Identities=16% Similarity=0.298 Sum_probs=26.4
Q ss_pred EEEEEec---CCCceEEEEEeCCCCCeeeeCCCCC
Q 011141 91 FGEIGIG---TPPQNFTVIFDTGSSNLWVPSSKCY 122 (492)
Q Consensus 91 ~~~i~iG---tP~Q~~~v~lDTGSs~~WV~~~~C~ 122 (492)
.+.|.|| +|+|.+..++|||.+++-+....++
T Consensus 12 lvtikI~~~~~~Gq~~eaLLDTGADdTVl~~~~lP 46 (116)
T 3liy_A 12 VIKAQVDTQTSHPKTIEALLDTGADMTVIPIALFS 46 (116)
T ss_dssp EEEEEEECSSSCCEEEEEEECTTBSSCEEEGGGSC
T ss_pred eEEEEEccccCCCeEeEEEeccCCCccEEecccCC
Confidence 4556665 8899999999999999999876664
No 65
>2i1a_A DNA damage-inducible protein DDI1; acid protease fold, dimer, retroviral protease domain, protein turnover; HET: DNA; 2.30A {Saccharomyces cerevisiae}
Probab=61.59 E-value=6.1 Score=33.45 Aligned_cols=29 Identities=17% Similarity=0.257 Sum_probs=23.4
Q ss_pred EEEcCccccccCCCceEEEcCCCCceeccHHHHHHH
Q 011141 276 VMIDGQTTGFCAGGCAAIADSGTSLLAGPTTIITQV 311 (492)
Q Consensus 276 i~vg~~~~~~~~~~~~aiiDTGtt~i~lP~~~~~~l 311 (492)
+.+||..+ .++||||++.+.++.+..+.+
T Consensus 31 v~InG~~~-------~~LvDTGAs~s~is~~~a~~l 59 (148)
T 2i1a_A 31 IEINNYPV-------KAFVDTGAQTTIMSTRLAKKT 59 (148)
T ss_dssp EEETTEEE-------EEEECTTCSSCEEEHHHHHHH
T ss_pred EEECCEEE-------EEEEECCCCccccCHHHHHHc
Confidence 46777754 399999999999998877664
No 66
>3s64_A AC-SLP-1, saposin-like protein 1; lipid-binding, lipid binding protein; HET: CIT EPE; 2.30A {Ancylostoma caninum}
Probab=60.54 E-value=4.5 Score=31.37 Aligned_cols=52 Identities=23% Similarity=0.367 Sum_probs=41.4
Q ss_pred HHHHHHHHHHh-CCccccccccchhhcchhHHHHHHhhcccCccccccccccc
Q 011141 305 TTIITQVNHAI-GATGIVSQECKAVVSQYGEEIINMLLAKDEPQKICSQIGLC 356 (492)
Q Consensus 305 ~~~~~~l~~~i-~~~~~~~~~C~~~~~~y~~~~~~~~~~~~~~~~~c~~~~~C 356 (492)
...+++.=+.+ ++..+....|+.++.+|.+.+++.+..+..|..+|..++.|
T Consensus 35 e~~~d~~Ckk~~~~ip~a~k~C~~~v~~~~d~II~eLe~g~~P~~VC~~L~~C 87 (87)
T 3s64_A 35 EKEFIQGCMTLIGWLPYAEKECKALAKIEMGAIKTLLENGSAPEEICTTLHAC 87 (87)
T ss_dssp HHHHHHHHHHHHCSSTTHHHHHHHHHHHHHHHHHHHHHTTCCTTTHHHHHHCC
T ss_pred HHHHHHHHHHhcccCCchHHHHHHHHHHhHHHHHHHHHcCCCHHHHHHHhccC
Confidence 34455554444 44555667899999999999999999999999999998877
No 67
>1tzs_P Activation peptide from cathepsin E; hydrolase, aspartic protease, activation intermediate; 2.35A {Homo sapiens}
Probab=60.50 E-value=2.8 Score=25.74 Aligned_cols=23 Identities=17% Similarity=0.036 Sum_probs=17.9
Q ss_pred ceEEEeccccCcchhhhhhhccc
Q 011141 29 GLYRIGLKKRKFDLNNRVAARLD 51 (492)
Q Consensus 29 ~~~~ipL~~~~~~~~~~~~~~~~ 51 (492)
+++||||+|.++.++.+.+.+..
T Consensus 2 ~l~rIpL~K~~s~r~~l~~~g~~ 24 (35)
T 1tzs_P 2 SLHRVPLRRHPSLKKKLRARSQL 24 (35)
T ss_pred cEEEEEeEEchHHHHHHHHcccH
Confidence 47899999998888877765543
No 68
>3s8i_A Protein DDI1 homolog 1; protease, structural genomics, structural genomics consortiu retropepsin-like domain, protein turnover, hydrolase; 1.70A {Homo sapiens}
Probab=60.04 E-value=6 Score=33.90 Aligned_cols=28 Identities=18% Similarity=0.306 Sum_probs=23.0
Q ss_pred EEcCccccccCCCceEEEcCCCCceeccHHHHHHH
Q 011141 277 MIDGQTTGFCAGGCAAIADSGTSLLAGPTTIITQV 311 (492)
Q Consensus 277 ~vg~~~~~~~~~~~~aiiDTGtt~i~lP~~~~~~l 311 (492)
.||+..+ .++||||++.+.++.+.++++
T Consensus 30 ~Ing~~v-------~~LVDTGAs~s~Is~~~A~rl 57 (148)
T 3s8i_A 30 KVNGHPL-------KAFVDSGAQMTIMSQACAERC 57 (148)
T ss_dssp EETTEEE-------EEEECTTCSSCEEEHHHHHHT
T ss_pred EECCEEE-------EEEEeCCCCcEeeCHHHHHHc
Confidence 4677655 399999999999999877765
No 69
>1htr_P Progastricsin (Pro segment); aspartyl protease; 1.62A {Homo sapiens} SCOP: b.50.1.2 PDB: 1avf_P
Probab=59.40 E-value=3.4 Score=26.80 Aligned_cols=24 Identities=21% Similarity=0.068 Sum_probs=18.9
Q ss_pred eEEEeccccCcchhhhhhhccccc
Q 011141 30 LYRIGLKKRKFDLNNRVAARLDSK 53 (492)
Q Consensus 30 ~~~ipL~~~~~~~~~~~~~~~~~~ 53 (492)
++||||+|.++.++.+.+.+...+
T Consensus 2 l~RIpL~K~~s~R~~l~~~g~~~~ 25 (43)
T 1htr_P 2 VVKVPLKKFKSIRETMKEKGLLGE 25 (43)
T ss_dssp CEEEEEEECCCHHHHHHHTTCHHH
T ss_pred eEEEeeeEcchHHHHHHHcCcHHH
Confidence 689999999999888877664433
No 70
>2hah_A Protease, retropepsin; retroviral, aspartyl, hydrolase-hydrolase complex; HET: 3TL; 1.70A {Feline immunodeficiency virus} PDB: 3ogp_A* 3ogq_A* 2fiv_A* 6fiv_A* 3fiv_A* 5fiv_A* 4fiv_A* 1fiv_A* 1b11_A*
Probab=58.74 E-value=9 Score=31.36 Aligned_cols=28 Identities=14% Similarity=0.094 Sum_probs=23.3
Q ss_pred EEEEEEecCCCceEEEEEeCCCCCeeeeCCC
Q 011141 90 YFGEIGIGTPPQNFTVIFDTGSSNLWVPSSK 120 (492)
Q Consensus 90 Y~~~i~iGtP~Q~~~v~lDTGSs~~WV~~~~ 120 (492)
=+. |.|| +|.+.+++|||.+++-+....
T Consensus 15 P~v-ikI~--Gq~~eaLLDTGAD~TVi~~~~ 42 (116)
T 2hah_A 15 EIL-IFVN--GYPIKFLLDTGADITVLNRRD 42 (116)
T ss_dssp EEE-EEET--TEEEEEEECTTCSSCEEEGGG
T ss_pred CEE-EEEC--CEEEEEEecCCCCcEEEcccc
Confidence 345 9999 699999999999999887543
No 71
>3sqf_A Protease; folded monomer, retropepsin, D-type retrovirus; 1.63A {Mason-pfizer monkey virus} SCOP: b.50.1.1 PDB: 1nso_A
Probab=55.28 E-value=12 Score=30.57 Aligned_cols=30 Identities=13% Similarity=0.087 Sum_probs=25.5
Q ss_pred EEEEEEecCCCceEEEEEeCCCCCeeeeCCCC
Q 011141 90 YFGEIGIGTPPQNFTVIFDTGSSNLWVPSSKC 121 (492)
Q Consensus 90 Y~~~i~iGtP~Q~~~v~lDTGSs~~WV~~~~C 121 (492)
=.+.|.|| +|.+.+++|||.+++-+...++
T Consensus 10 P~vti~I~--Gq~~eaLLDTGADdTVi~~~~l 39 (114)
T 3sqf_A 10 PSLTLWLD--DKMFTGLINTGADVTIIKLEDW 39 (114)
T ss_dssp CEEEEEET--TEEEEEEECTTCSSCEEEGGGS
T ss_pred CeEEEEEC--CEEEEEEEccCCCceEEecccC
Confidence 35678898 6999999999999999976555
No 72
>3slz_A GAG-Pro-POL polyprotein; beta sheet and dimer, protease, peptide inhibitor, TL-3 PEPS virus, hydrolase-hydrolase inhibitor complex; HET: 3TL; 1.40A {Dg-75 murine leukemia virus} PDB: 3nr6_A* 3sm1_A* 3sm2_A* 4exh_A*
Probab=50.12 E-value=19 Score=30.19 Aligned_cols=31 Identities=19% Similarity=0.217 Sum_probs=25.5
Q ss_pred eEEEEEEecCCCceEEEEEeCCCCCeeeeCCCC
Q 011141 89 QYFGEIGIGTPPQNFTVIFDTGSSNLWVPSSKC 121 (492)
Q Consensus 89 ~Y~~~i~iGtP~Q~~~v~lDTGSs~~WV~~~~C 121 (492)
.-++.+.|+ +|.+.+++|||.+++-+.....
T Consensus 22 RP~v~i~I~--G~~~~~LlDTGAd~tVl~~~~~ 52 (132)
T 3slz_A 22 EPRITLKVG--GQPVTFLVDTGAQHSVLTQNPG 52 (132)
T ss_dssp SSEEEEEET--TEEEEEEECTTCSSCEECSCCC
T ss_pred CCEEEEEEC--CEEEEEEEeCCCCeEEEccccC
Confidence 457789999 6999999999999998865443
No 73
>2rsp_A RSV protease; hydrolase(aspartyl proteinase); 2.00A {Rous sarcoma virus} SCOP: b.50.1.1 PDB: 1mvp_A 1bai_A*
Probab=41.17 E-value=27 Score=28.84 Aligned_cols=25 Identities=12% Similarity=0.159 Sum_probs=20.7
Q ss_pred ecCCCceEEEEEeCCCCCeeeeCCCCC
Q 011141 96 IGTPPQNFTVIFDTGSSNLWVPSSKCY 122 (492)
Q Consensus 96 iGtP~Q~~~v~lDTGSs~~WV~~~~C~ 122 (492)
|| +|.+.+++|||.+++-+.....+
T Consensus 27 i~--gq~~eaLLDTGAD~TVl~~~~lP 51 (124)
T 2rsp_A 27 QR--SVYITALLDSGADITIISEEDWP 51 (124)
T ss_dssp CS--EEEEEEEECTTCSSCEEETTTSC
T ss_pred CC--CEEEEEEecCCCCcEEEecccCC
Confidence 55 58889999999999999876653
No 74
>3ka2_A [L-Ala51;Gly51']HIV-1 protease; beta-barrel, hydrolase-hydrolase inhibitor complex; HET: YCM 2NC; 1.40A {Synthetic} PDB: 3fsm_A* 3gi0_A* 2o40_A* 3hzc_A* 3hlo_A* 3iaw_A* 3nxe_A* 3nxn_A* 4epj_A 4ep2_A 4ep3_A 4eq0_A 4eqj_A 1hvc_A* 1g6l_A 2whh_A* 1lv1_A* 3dox_A 3kt5_A 3kt2_A ...
Probab=38.96 E-value=26 Score=31.58 Aligned_cols=29 Identities=24% Similarity=0.276 Sum_probs=24.7
Q ss_pred EEEEEEecCCCceEEEEEeCCCCCeeeeCCC
Q 011141 90 YFGEIGIGTPPQNFTVIFDTGSSNLWVPSSK 120 (492)
Q Consensus 90 Y~~~i~iGtP~Q~~~v~lDTGSs~~WV~~~~ 120 (492)
-.+.|.|| +|.+.+++|||.+++-+...+
T Consensus 9 P~vtv~I~--Gq~~e~LLDTGAD~TVl~~~~ 37 (203)
T 3ka2_A 9 PLVTIRIG--GQLKEALLDTGADDTVIEELN 37 (203)
T ss_dssp CEEEEEET--TEEEEEEECTTCSSCEECSCC
T ss_pred CeEEEEEC--CEEEEEEEecCCCceEEeccc
Confidence 47789999 699999999999999886443
No 75
>1ssz_A Pulmonary surfactant-associated protein B; LUNG surfactant protein, saposin, surface active protein; NMR {Synthetic}
Probab=36.09 E-value=16 Score=21.80 Aligned_cols=18 Identities=17% Similarity=0.458 Sum_probs=16.0
Q ss_pred CchhHHHHHHHHHHHhhh
Q 011141 388 CSTCEMAVVWMQNQLKQN 405 (492)
Q Consensus 388 c~~~~~~~~~~~~~~~~~ 405 (492)
|-+|.-+|.++|.++++-
T Consensus 1 cwlcr~likriqa~ipk~ 18 (34)
T 1ssz_A 1 CWLCRALIKRIQAMIPKG 18 (34)
T ss_dssp CHHHHHHHHHHHHHCSSS
T ss_pred ChhHHHHHHHHHHHcccc
Confidence 778999999999999874
No 76
>1bxo_A Protein (penicillopepsin); hydrolase, phosphonate inhibitors, macrocycle; HET: MAN PP7; 0.95A {Penicillium janthinellum} SCOP: b.50.1.2 PDB: 1apu_E* 1apv_E* 1apw_E* 1apt_E* 1bxq_A* 1ppk_E* 1ppl_E* 1ppm_E* 2wea_A* 2web_A* 2wec_A* 2wed_A* 3app_A
Probab=35.92 E-value=30 Score=33.18 Aligned_cols=43 Identities=23% Similarity=0.162 Sum_probs=30.6
Q ss_pred cccceEEeccCccceEEEeceEEEcCccccccCCCceEEEcCCCCceeccHHH
Q 011141 255 KGEHTYVPVTQKGYWQFDMGDVMIDGQTTGFCAGGCAAIADSGTSLLAGPTTI 307 (492)
Q Consensus 255 ~g~l~~~p~~~~~~w~v~l~~i~vg~~~~~~~~~~~~aiiDTGtt~i~lP~~~ 307 (492)
.|.+...|+.....|.++ |.||.+ ...+++|||++.+++|...
T Consensus 3 ~g~v~~~~~~~~~~Y~~~---i~iG~Q-------~~~v~~DTGSs~lWv~~~~ 45 (323)
T 1bxo_A 3 SGVATNTPTANDEEYITP---VTIGGT-------TLNLNFDTGSADLWVFSTE 45 (323)
T ss_dssp CEEEEEEECGGGSCEEEE---EEETTE-------EEEEEEETTCCCEEECBTT
T ss_pred CCceeeeecCCCCEEEEE---EEECCE-------EEEEEEeCCCcceEEecCC
Confidence 355566676666677665 577833 3459999999999998753
No 77
>1ibq_A Aspergillopepsin; aspartic proteinase, hydrolase; HET: MAN; 2.14A {Aspergillus phoenicis} SCOP: b.50.1.2
Probab=34.86 E-value=33 Score=32.98 Aligned_cols=42 Identities=14% Similarity=0.049 Sum_probs=29.9
Q ss_pred ccceEEeccCccceEEEeceEEEcCccccccCCCceEEEcCCCCceeccHHH
Q 011141 256 GEHTYVPVTQKGYWQFDMGDVMIDGQTTGFCAGGCAAIADSGTSLLAGPTTI 307 (492)
Q Consensus 256 g~l~~~p~~~~~~w~v~l~~i~vg~~~~~~~~~~~~aiiDTGtt~i~lP~~~ 307 (492)
|.+...|+.....|.++ |.||.+ ...+++|||++.+++|...
T Consensus 3 ~~v~~~~~~~~~~Y~~~---i~iG~Q-------~~~v~~DTGSs~lWv~~~~ 44 (325)
T 1ibq_A 3 GSAVTTPQNNDEEYLTP---VTVGKS-------TLHLDFDTGSADLWVFSDE 44 (325)
T ss_dssp EEEEEEECTTTSCEEEE---EEEBTE-------EEEEEEETTCCCEEEECTT
T ss_pred ceEEeEEcCCCCEEEEE---EEECCE-------EEEEEEeCCCccceEeeCC
Confidence 45556666666677665 567733 3459999999999998753
No 78
>2dwf_A Pulmonary surfactant-associated protein B; mini-B, SP-B, surfactant protein B, lipid associated protein, surface active protein; NMR {Synthetic} SCOP: j.35.1.1 PDB: 2jou_A
Probab=33.43 E-value=20 Score=21.94 Aligned_cols=18 Identities=17% Similarity=0.458 Sum_probs=16.5
Q ss_pred CchhHHHHHHHHHHHhhh
Q 011141 388 CSTCEMAVVWMQNQLKQN 405 (492)
Q Consensus 388 c~~~~~~~~~~~~~~~~~ 405 (492)
|-+|.-+|..+|-+|++.
T Consensus 1 CwlCrtlikriq~vIPk~ 18 (34)
T 2dwf_A 1 CWLCRALIKRIQAMIPKG 18 (34)
T ss_dssp CCCHHHHHHHHHHHCTTC
T ss_pred ChhHHHHHHHHHhhcCCc
Confidence 778999999999999885
No 79
>1izd_A Aspartic proteinase; sugar binding, acid protease, hydrolase; HET: MAN; 1.90A {Aspergillus oryzae} SCOP: b.50.1.2 PDB: 1ize_A*
Probab=32.77 E-value=36 Score=32.61 Aligned_cols=42 Identities=17% Similarity=0.116 Sum_probs=29.7
Q ss_pred ccceEEeccCccceEEEeceEEEcCccccccCCCceEEEcCCCCceeccHHH
Q 011141 256 GEHTYVPVTQKGYWQFDMGDVMIDGQTTGFCAGGCAAIADSGTSLLAGPTTI 307 (492)
Q Consensus 256 g~l~~~p~~~~~~w~v~l~~i~vg~~~~~~~~~~~~aiiDTGtt~i~lP~~~ 307 (492)
|.+...|+.....|.++ |.||.+ ...+++|||++.+++|...
T Consensus 4 ~~v~~~~~~~~~~Y~~~---i~iG~q-------~~~v~~DTGSs~lWv~~~~ 45 (323)
T 1izd_A 4 GSVTTNPTSNDEEYITQ---VTVGDD-------TLGLDFDTGSADLWVFSSQ 45 (323)
T ss_dssp EEEEEEECGGGCCEEEE---EEETTE-------EEEEEEETTCCCEEECBTT
T ss_pred CceeeeEcCCCCEEEEE---EEECCE-------EEEEEEcCCCcceEEecCC
Confidence 45555666666667655 577833 3459999999999999753
No 80
>1lya_A Cathepsin D; lysosomal aspartic protease; HET: NAG BMA MAN; 2.50A {Homo sapiens} SCOP: b.50.1.2 PDB: 1lyb_A* 1lyw_A*
Probab=28.93 E-value=19 Score=28.12 Aligned_cols=33 Identities=18% Similarity=0.191 Sum_probs=22.6
Q ss_pred ccceEEEeceEEEcCccccccCCCceEEEcCCCCceeccHH
Q 011141 266 KGYWQFDMGDVMIDGQTTGFCAGGCAAIADSGTSLLAGPTT 306 (492)
Q Consensus 266 ~~~w~v~l~~i~vg~~~~~~~~~~~~aiiDTGtt~i~lP~~ 306 (492)
...|.+. |.||.. .....++||||++.+++|..
T Consensus 12 ~~~Y~~~---i~iGTP-----~Q~~~v~~DTGSs~lWv~~~ 44 (97)
T 1lya_A 12 DAQYYGE---IGIGTP-----PQCFTVVFDTGSSNLWVPSI 44 (97)
T ss_dssp TTEEEEE---EEETTT-----TEEEEEEEETTCCCEEEEBT
T ss_pred CCeEEEE---EEECCC-----CeEEEEEEeCCCCceEEeEc
Confidence 3445554 567742 23456999999999999854
No 81
>1mpp_A Pepsin; hydrolase(acid proteinase); 2.00A {Rhizomucor pusillus} SCOP: b.50.1.2 PDB: 2asi_A* 2rmp_A*
Probab=24.96 E-value=54 Score=31.84 Aligned_cols=44 Identities=16% Similarity=0.092 Sum_probs=29.9
Q ss_pred cccceEEeccC--ccceEEEeceEEEcCccccccCCCceEEEcCCCCceeccHH
Q 011141 255 KGEHTYVPVTQ--KGYWQFDMGDVMIDGQTTGFCAGGCAAIADSGTSLLAGPTT 306 (492)
Q Consensus 255 ~g~l~~~p~~~--~~~w~v~l~~i~vg~~~~~~~~~~~~aiiDTGtt~i~lP~~ 306 (492)
+|.....|+.+ ...|.+. |.||.. .....++||||++.+++|..
T Consensus 4 ~g~~~~~~l~~~~~~~Y~~~---i~iGtP-----~q~~~v~~DTGSs~~Wv~~~ 49 (361)
T 1mpp_A 4 DGSVDTPGLYDFDLEEYAIP---VSIGTP-----GQDFYLLFDTGSSDTWVPHK 49 (361)
T ss_dssp -CCEEEEEEEETTTTEEEEE---EEETTT-----TEEEEEEEETTCCCCEEEBT
T ss_pred CCccceEEeecCCCCEEEEE---EEECCC-----CcEEEEEEcCCCCCeEECCC
Confidence 45666677754 4566554 567742 23456999999999999864
No 82
>3vdj_A Circumsporozoite (CS) protein; TSR, ATSR, cell invasion; 1.70A {Plasmodium falciparum} PDB: 3vdk_A 3vdl_A
Probab=23.56 E-value=53 Score=24.62 Aligned_cols=29 Identities=21% Similarity=0.514 Sum_probs=25.3
Q ss_pred chHHHHHHHHHhhcccCCCCCCceeeeCc
Q 011141 406 QTQERILNYVNELCDRLPSPMGESAVDCS 434 (492)
Q Consensus 406 ~~~~~~~~~~~~~c~~~~~~~~~~~~~c~ 434 (492)
+++|.|++|++++...+.++.+.-.+.|.
T Consensus 6 p~~~~i~~~l~ki~~~vtS~WS~CSvTCG 34 (77)
T 3vdj_A 6 PSDKHIKEYLNKIQNSLSTEWSPCSVTCG 34 (77)
T ss_dssp CCHHHHHHHHHHHTTTCSSSCCCCSCSSS
T ss_pred ccHHHHHHHHHHHhccccccCCCCCCcCC
Confidence 57899999999999999988887777776
No 83
>1oew_A Endothiapepsin; hydrolase, aspartic proteinase mechanism, atomic resolution, succinimide, anisotropic refinement; HET: SUI; 0.9A {Cryphonectria parasitica} SCOP: b.50.1.2 PDB: 1gkt_A* 1gvt_A* 1gvv_A* 1gvw_A* 1gvx_A* 1gvu_A* 1oex_A* 2jji_A* 2jjj_A* 2vs2_A* 3uri_A* 3urj_A* 3url_A* 3pww_A* 1e80_E* 1e81_E* 1e82_E* 1e5o_E* 1eed_P* 1epl_E* ...
Probab=22.75 E-value=70 Score=30.62 Aligned_cols=42 Identities=19% Similarity=-0.019 Sum_probs=27.8
Q ss_pred cceEE-eccCccceEEEeceEEEcCccccccCCCceEEEcCCCCceeccHH
Q 011141 257 EHTYV-PVTQKGYWQFDMGDVMIDGQTTGFCAGGCAAIADSGTSLLAGPTT 306 (492)
Q Consensus 257 ~l~~~-p~~~~~~w~v~l~~i~vg~~~~~~~~~~~~aiiDTGtt~i~lP~~ 306 (492)
.+.-. |......|.++ |.||.. .....+++|||++.+++|..
T Consensus 4 ~v~~~~~~~~~~~Y~~~---i~iGTP-----~Q~~~v~~DTGSs~lWv~~~ 46 (329)
T 1oew_A 4 SATTTPIDSLDDAYITP---VQIGTP-----AQTLNLDFDTGSSDLWVFSS 46 (329)
T ss_dssp EEEEEESSTTCCCEEEE---EEETTT-----TEEEEEEEETTCCCEEECBT
T ss_pred eeEeeecCCCCCEEEEE---EEECCC-----CeEEEEEECCCCCCeEEecC
Confidence 33444 45455666654 567742 23456999999999999864
No 84
>3c9x_A Trichoderma reesei aspartic protease; aspartic proteinase, aspartyl protease, hydrolase; 1.70A {Trichoderma reesei} PDB: 3c9y_A* 3emy_A*
Probab=22.01 E-value=74 Score=30.45 Aligned_cols=43 Identities=16% Similarity=-0.043 Sum_probs=28.0
Q ss_pred cceEE-eccCccceEEEeceEEEcCccccccCCCceEEEcCCCCceeccHHH
Q 011141 257 EHTYV-PVTQKGYWQFDMGDVMIDGQTTGFCAGGCAAIADSGTSLLAGPTTI 307 (492)
Q Consensus 257 ~l~~~-p~~~~~~w~v~l~~i~vg~~~~~~~~~~~~aiiDTGtt~i~lP~~~ 307 (492)
.+.-. |......|.++ |.||.. .....+++|||++.+++|...
T Consensus 4 ~v~~~~~~~~~~~Y~~~---i~iGTP-----~Q~~~v~~DTGSs~lWv~~~~ 47 (329)
T 3c9x_A 4 SAPNHPSDSADSEYITS---VSIGTP-----AQVLPLDFDTGSSDLWVFSSE 47 (329)
T ss_dssp EEEEEESSTTCCCEEEE---EEETTT-----TEEEEEEEETTCCCEEECBTT
T ss_pred ceeeecCCCCCCEEEEE---EEECCC-----CeEEEEEEcCCCCCeEEecCC
Confidence 33444 44455566554 567742 234569999999999998753
No 85
>3f0i_A Arsenate reductase; structural genomics, IDP01300, vibrio CH center for structural genomics of infectious diseases, CSGI oxidoreductase; HET: MSE; 1.88A {Vibrio cholerae}
Probab=21.00 E-value=97 Score=24.95 Aligned_cols=36 Identities=19% Similarity=0.390 Sum_probs=30.6
Q ss_pred CcccCchhHHHHHHHHH---------HHhhhchHHHHHHHHHhhc
Q 011141 384 HDAMCSTCEMAVVWMQN---------QLKQNQTQERILNYVNELC 419 (492)
Q Consensus 384 ~~~~c~~~~~~~~~~~~---------~~~~~~~~~~~~~~~~~~c 419 (492)
+.+.|..|.-+..||++ ....+.+.+++...+++.-
T Consensus 10 ~~p~C~~c~ka~~~L~~~gi~~~~~di~~~~~t~~eL~~~l~~~g 54 (119)
T 3f0i_A 10 HNPKCSKSRETLALLENQGIAPQVIKYLETSPSVEELKRLYQQLG 54 (119)
T ss_dssp CCTTCHHHHHHHHHHHHTTCCCEEECHHHHCCCHHHHHHHHHHHT
T ss_pred ECCCChHHHHHHHHHHHcCCceEEEEeccCcCcHHHHHHHHHHcC
Confidence 56789999999999997 4578889999999998764
No 86
>3ka2_A [L-Ala51;Gly51']HIV-1 protease; beta-barrel, hydrolase-hydrolase inhibitor complex; HET: YCM 2NC; 1.40A {Synthetic} PDB: 3fsm_A* 3gi0_A* 2o40_A* 3hzc_A* 3hlo_A* 3iaw_A* 3nxe_A* 3nxn_A* 4epj_A 4ep2_A 4ep3_A 4eq0_A 4eqj_A 1hvc_A* 1g6l_A 2whh_A* 1lv1_A* 3dox_A 3kt5_A 3kt2_A ...
Probab=20.17 E-value=1.1e+02 Score=27.51 Aligned_cols=30 Identities=23% Similarity=0.251 Sum_probs=24.8
Q ss_pred EEEEEEecCCCceEEEEEeCCCCCeeeeCCCC
Q 011141 90 YFGEIGIGTPPQNFTVIFDTGSSNLWVPSSKC 121 (492)
Q Consensus 90 Y~~~i~iGtP~Q~~~v~lDTGSs~~WV~~~~C 121 (492)
=.+++.|| +|.+.+++|||.+++-+...+.
T Consensus 113 P~~~iki~--Gq~~e~LlDTGAD~TVl~~~~l 142 (203)
T 3ka2_A 113 PLVTIRIG--GQLKEALLDTGADDTVIEELNL 142 (203)
T ss_dssp CEEEEEET--TEEEEEEECTTCSSCEECSCCC
T ss_pred CcEEEEEC--CEEEeeeecccCCceeeecccC
Confidence 36789999 6999999999999998865443
No 87
>2apr_A Rhizopuspepsin; hydrolase (aspartic proteinase); 1.80A {Rhizopus microsporus var} SCOP: b.50.1.2 PDB: 3apr_E* 4apr_E* 5apr_E* 6apr_E* 1uh9_A 1uh8_A 1uh7_A
Probab=20.13 E-value=88 Score=29.83 Aligned_cols=41 Identities=17% Similarity=-0.036 Sum_probs=26.4
Q ss_pred ceEEeccCccceEEEeceEEEcCccccccCCCceEEEcCCCCceeccHH
Q 011141 258 HTYVPVTQKGYWQFDMGDVMIDGQTTGFCAGGCAAIADSGTSLLAGPTT 306 (492)
Q Consensus 258 l~~~p~~~~~~w~v~l~~i~vg~~~~~~~~~~~~aiiDTGtt~i~lP~~ 306 (492)
+.-.+......|.++ |.||.. .....+++|||++.+++|..
T Consensus 6 v~~~~~~~~~~Y~~~---i~iGTP-----~q~~~v~~DTGSs~lWv~~~ 46 (325)
T 2apr_A 6 VPMTDYGNDIEYYGQ---VTIGTP-----GKKFNLDFDTGSSDLWIAST 46 (325)
T ss_dssp EEEEEETTTTEEEEE---EEETTT-----TEEEEEEEETTCCCCEEEBT
T ss_pred eeeeecCCCCEEEEE---EEECCC-----CeEEEEEEcCCCCCEEEccC
Confidence 333344445566554 567742 23456999999999999864
Done!