Query 011143
Match_columns 492
No_of_seqs 289 out of 2230
Neff 7.6
Searched_HMMs 29240
Date Mon Mar 25 21:42:01 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/011143.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/011143hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 1qdm_A Prophytepsin; aspartic 100.0 4.6E-76 1.6E-80 626.6 33.0 427 31-465 1-429 (478)
2 3psg_A Pepsinogen; hydrolase(a 100.0 3E-60 1E-64 490.3 30.1 318 30-461 1-321 (370)
3 2x0b_A Renin; hydrolase-hormon 100.0 3.3E-59 1.1E-63 484.2 28.2 324 28-464 6-333 (383)
4 3cms_A Chymosin B; hydrolase, 100.0 2.1E-53 7.3E-58 431.2 29.3 276 76-461 3-278 (323)
5 4aa9_A Chymosin; hydrolase, as 100.0 2E-53 6.9E-58 430.5 27.7 274 78-461 2-275 (320)
6 1tzs_A Cathepsin E; hydrolase, 100.0 3.4E-53 1.2E-57 434.6 29.7 281 76-464 12-292 (351)
7 1dpj_A Proteinase A; proteinas 100.0 9E-53 3.1E-57 427.6 30.6 279 77-463 3-282 (329)
8 3k1w_A Renin; protease, altern 100.0 7.8E-53 2.7E-57 429.8 27.6 283 75-465 6-291 (341)
9 1am5_A Pepsin, acid proteinase 100.0 2.2E-52 7.5E-57 423.9 27.8 274 78-462 3-276 (324)
10 1htr_B Gastricsin; aspartyl pr 100.0 1.8E-52 6.1E-57 425.4 27.1 278 78-463 4-281 (329)
11 1miq_A Plasmepsin; aspartic pr 100.0 3.1E-52 1E-56 431.2 27.5 274 75-464 50-327 (375)
12 3qvc_A Histo-aspartic protease 100.0 7.4E-52 2.5E-56 436.9 27.6 274 75-464 125-402 (451)
13 2bju_A Plasmepsin II; aspartic 100.0 1.7E-51 5.8E-56 433.9 26.6 275 75-464 126-403 (453)
14 1mpp_A Pepsin; hydrolase(acid 100.0 6.3E-51 2.2E-55 419.1 27.5 280 76-463 7-310 (361)
15 1yg9_A Aspartic protease BLA G 100.0 8.5E-51 2.9E-55 413.4 27.0 273 77-462 7-285 (330)
16 2apr_A Rhizopuspepsin; hydrola 100.0 2.8E-48 9.5E-53 394.0 31.2 228 83-317 11-241 (325)
17 1b5f_A Protein (cardosin A); h 100.0 1.1E-48 3.8E-53 380.3 25.3 237 77-317 3-239 (239)
18 3c9x_A Trichoderma reesei aspa 100.0 4.4E-48 1.5E-52 393.2 29.2 225 83-316 11-241 (329)
19 3fv3_A SAPP1P-secreted asparti 100.0 6.2E-48 2.1E-52 393.4 29.1 228 77-317 3-243 (339)
20 1oew_A Endothiapepsin; hydrola 100.0 6.2E-48 2.1E-52 392.1 28.6 222 85-316 13-240 (329)
21 1j71_A Candidapepsin, aspartic 100.0 8.3E-48 2.9E-52 391.9 27.9 228 77-317 3-241 (334)
22 2qzx_A Candidapepsin-5; aspart 100.0 2.3E-47 7.8E-52 389.9 28.8 228 77-317 3-241 (342)
23 3pvk_A Candidapepsin-2; hydrol 100.0 8.8E-47 3E-51 385.2 27.5 229 77-317 3-241 (342)
24 1izd_A Aspartic proteinase; su 100.0 3.6E-46 1.2E-50 378.2 27.9 271 79-469 9-284 (323)
25 1ibq_A Aspergillopepsin; aspar 100.0 8.1E-46 2.8E-50 375.9 29.5 219 85-315 12-235 (325)
26 1bxo_A Protein (penicillopepsi 100.0 4.9E-46 1.7E-50 377.2 23.5 222 79-316 9-235 (323)
27 1wkr_A Polyporopepsin; hydrola 100.0 2.5E-45 8.5E-50 374.5 27.8 261 77-463 3-277 (340)
28 3lpj_A Beta-secretase 1; alzhe 100.0 6.2E-46 2.1E-50 393.4 23.8 232 80-317 67-313 (455)
29 2ewy_A Beta-secretase 2; BACE2 100.0 6.2E-45 2.1E-49 377.3 24.7 233 79-317 5-249 (383)
30 3vf3_A Beta-secretase 1; struc 100.0 2.3E-44 7.9E-49 375.4 26.6 231 81-317 22-267 (402)
31 2qp8_A Beta-secretase 1; BACE1 100.0 5.1E-44 1.7E-48 372.1 25.3 231 80-317 14-260 (395)
32 3aup_A SBG7S, BG, basic 7S glo 100.0 5E-43 1.7E-47 365.6 24.3 229 77-317 10-288 (403)
33 3vla_A EDGP; extracellular, in 100.0 5.6E-43 1.9E-47 366.0 19.0 231 77-317 9-294 (413)
34 1t6e_X Xylanase inhibitor; two 100.0 8.1E-40 2.8E-44 338.9 16.8 222 78-317 4-258 (381)
35 1lya_B Cathepsin D; lysosomal 100.0 1.4E-32 4.8E-37 266.8 21.2 191 168-464 1-191 (241)
36 1lya_A Cathepsin D; lysosomal 99.9 2.3E-23 7.9E-28 173.5 10.1 93 77-169 3-96 (97)
37 3rfi_A Asp; PSI, saposin, hydr 99.6 2E-17 6.9E-22 140.1 2.0 107 315-423 2-108 (108)
38 1b5f_B Protein (cardosin A); h 98.0 3.6E-06 1.2E-10 67.7 4.5 38 427-464 1-38 (87)
39 3bqp_A Proactivator polypeptid 97.9 5E-06 1.7E-10 65.6 2.5 50 385-437 2-51 (80)
40 2qyp_A Proactivator polypeptid 97.8 3.8E-06 1.3E-10 68.2 1.5 52 383-437 3-54 (91)
41 4ddj_A Saposin-A, protein A; s 97.7 1.8E-05 6.2E-10 62.9 3.4 51 384-436 2-52 (83)
42 1of9_A Pore-forming peptide am 97.6 2.5E-05 8.5E-10 61.3 2.0 49 384-436 1-49 (77)
43 2gtg_A Proactivator polypeptid 97.5 8.3E-05 2.8E-09 59.0 4.3 51 383-436 2-52 (83)
44 1n69_A Saposin B; lipid bindin 97.3 0.00014 4.6E-09 57.6 3.7 50 384-436 2-52 (81)
45 2js9_A Saposin-like protein fa 97.3 7E-05 2.4E-09 61.6 1.4 54 383-438 19-72 (99)
46 1l9l_A Granulysin; saposin fol 97.3 0.00017 5.8E-09 56.1 3.5 47 386-436 2-48 (74)
47 1nkl_A NK-lysin; saposin fold, 97.2 0.00014 4.8E-09 57.2 3.0 48 385-436 1-48 (78)
48 2i1a_A DNA damage-inducible pr 92.5 0.17 5.9E-06 43.9 5.8 91 85-200 23-115 (148)
49 2qyp_A Proactivator polypeptid 87.2 0.23 7.7E-06 39.6 1.7 39 320-358 46-84 (91)
50 3vcm_P Prorenin; aspartic prot 85.9 0.52 1.8E-05 32.0 2.8 25 29-53 7-31 (43)
51 3s8i_A Protein DDI1 homolog 1; 85.7 1 3.5E-05 39.3 5.3 90 87-200 23-114 (148)
52 3bqp_A Proactivator polypeptid 84.6 0.27 9.3E-06 37.8 1.0 37 320-356 43-79 (80)
53 2js9_A Saposin-like protein fa 81.0 0.6 2.1E-05 37.9 1.7 39 318-356 61-99 (99)
54 1nkl_A NK-lysin; saposin fold, 77.1 0.44 1.5E-05 36.8 -0.3 37 320-356 41-77 (78)
55 2gtg_A Proactivator polypeptid 77.0 0.43 1.5E-05 37.1 -0.3 37 320-356 45-81 (83)
56 1of9_A Pore-forming peptide am 75.4 0.46 1.6E-05 36.6 -0.6 38 318-355 40-77 (77)
57 2hs1_A HIV-1 protease; ultra-h 71.9 4.7 0.00016 32.6 4.6 29 90-120 10-38 (99)
58 1fmb_A EIAV protease; hydrolas 71.0 3.9 0.00013 33.4 4.0 27 89-117 9-35 (104)
59 4ddj_A Saposin-A, protein A; s 70.0 0.75 2.6E-05 35.7 -0.5 37 320-356 45-82 (83)
60 1htr_P Progastricsin (Pro segm 68.4 2.8 9.4E-05 27.7 2.2 23 30-52 2-24 (43)
61 1n69_A Saposin B; lipid bindin 66.0 1 3.5E-05 34.9 -0.5 37 319-356 44-80 (81)
62 3ec0_A Protease; HIV-2, inhibi 65.4 7.2 0.00025 31.5 4.4 29 90-120 10-38 (99)
63 3liy_A Protease; hydrolase, hy 63.9 6.4 0.00022 32.6 3.9 32 90-121 12-46 (116)
64 2i1a_A DNA damage-inducible pr 63.3 6.1 0.00021 33.8 4.0 29 275-310 31-59 (148)
65 3s8i_A Protein DDI1 homolog 1; 62.7 5.4 0.00018 34.6 3.5 29 275-310 29-57 (148)
66 1tzs_P Activation peptide from 62.5 2.6 8.8E-05 26.4 1.0 23 29-51 2-24 (35)
67 3s64_A AC-SLP-1, saposin-like 60.8 2.5 8.4E-05 33.4 0.8 38 384-423 9-46 (87)
68 2hah_A Protease, retropepsin; 53.3 12 0.0004 31.2 3.8 26 90-118 16-41 (116)
69 3sqf_A Protease; folded monome 49.5 17 0.00057 30.1 4.1 29 90-120 11-39 (114)
70 1l9l_A Granulysin; saposin fol 49.1 3.7 0.00013 31.3 0.1 33 320-352 41-73 (74)
71 3slz_A GAG-Pro-POL polyprotein 43.4 26 0.00088 29.7 4.5 30 88-119 22-51 (132)
72 1bxo_A Protein (penicillopepsi 37.7 30 0.001 33.4 4.7 37 425-463 241-277 (323)
73 3ka2_A [L-Ala51;Gly51']HIV-1 p 36.7 28 0.00095 31.8 3.9 28 89-118 9-36 (203)
74 1ibq_A Aspergillopepsin; aspar 35.6 33 0.0011 33.2 4.6 39 423-463 240-278 (325)
75 1izd_A Aspartic proteinase; su 34.7 36 0.0012 32.9 4.7 43 255-307 4-46 (323)
76 2rsp_A RSV protease; hydrolase 32.9 38 0.0013 28.4 3.8 24 95-120 27-50 (124)
77 1lya_A Cathepsin D; lysosomal 32.1 30 0.001 27.3 3.0 33 265-305 12-44 (97)
78 1mpp_A Pepsin; hydrolase(acid 27.1 54 0.0019 32.1 4.6 44 254-305 4-49 (361)
79 3s64_A AC-SLP-1, saposin-like 26.7 11 0.00038 29.6 -0.5 51 305-355 36-87 (87)
80 1oew_A Endothiapepsin; hydrola 23.6 68 0.0023 30.9 4.5 37 425-463 246-282 (329)
81 1fmb_A EIAV protease; hydrolas 23.2 47 0.0016 26.8 2.6 35 268-309 6-40 (104)
82 3c9x_A Trichoderma reesei aspa 22.4 74 0.0025 30.7 4.5 38 425-464 247-284 (329)
83 2apr_A Rhizopuspepsin; hydrola 21.7 86 0.0029 30.1 4.8 36 427-463 246-281 (325)
84 1b5f_A Protein (cardosin A); h 20.5 96 0.0033 28.4 4.6 39 78-118 181-227 (239)
No 1
>1qdm_A Prophytepsin; aspartic proteinases, saposin-like domain, zymogen structure, hydrolase; 2.30A {Hordeum vulgare} SCOP: a.64.1.2 b.50.1.2
Probab=100.00 E-value=4.6e-76 Score=626.59 Aligned_cols=427 Identities=67% Similarity=1.184 Sum_probs=356.4
Q ss_pred EEEeeeecCcchhhhcccCcccchhh-hcccccccccCCCCCC-CCCcceEeccccCCceEEEEEEEcCCCceEEEEEeC
Q 011143 31 VRIGLRKKKLDQINRLVGQTVSKEEE-TMRTPVRRYNLHGSLG-DSDTDIVALNNFMDAQYFGEVSIGTPSQTFTVIFDT 108 (492)
Q Consensus 31 ~ripL~r~~~~~~~~~~~~~~~~~~~-~l~~~~~~~~~~~~~~-~~~~~~~pl~n~~d~~Y~~~I~IGTP~Q~~~v~lDT 108 (492)
+||||+|+++.++.+.+.+.....++ +++ ++. ..+ .++...+||.|+.+.+|+++|+||||||+|+|+|||
T Consensus 1 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~----~~~---~~~~~~~~~~~~l~n~~~~~Y~~~i~IGTP~Q~~~v~~DT 73 (478)
T 1qdm_A 1 VRIALKKRPIDRNSRVATGLSGGEEQPLLS----GAN---PLRSEEEGDIVALKNYMNAQYFGEIGVGTPPQKFTVIFDT 73 (478)
T ss_dssp CEEEEEECCCCHHHHHHHHTC-----------------------CCSSCSGGGCCGGGCCEEEEEEETTTTEEEEEEEET
T ss_pred CeeeeeeccchHHHHHhcchhhhhHHHHHh----hcc---cccCcCCCceEEeEeccCCEEEEEEEECCCCeEEEEEEcC
Confidence 48999999999998877554322222 221 110 011 123567999999999999999999999999999999
Q ss_pred CCCceeeeCCCCCCCcCCCCCCCCCCCCCCceeECCeeEEEEecCCeeEEEEEEeEeEeeeeeeecceEEEEEecccccc
Q 011143 109 GSSNLWVPSAKCYFSVSCYFHSKYKSSHSSTYKRNGTSAAIQYGTGAISGFFSQDNVKVGDLVVKNQDFIEATKEASITF 188 (492)
Q Consensus 109 GSs~~WV~s~~C~~~~~C~~~~~y~p~~SsT~~~~~~~~~~~Yg~Gsv~G~~~~Dtv~lg~~~v~~~~Fg~a~~~~~~~~ 188 (492)
||+++||++..|..+..|..++.|+|++|+||+..++.|.+.|++|++.|.+++|+|++++.+++++.||++....+..|
T Consensus 74 GSs~lWV~~~~C~~~~~C~~~~~y~~~~SsT~~~~~~~~~i~Yg~Gs~~G~~~~Dtv~ig~~~v~~~~Fg~a~~~~~~~f 153 (478)
T 1qdm_A 74 GSSNLWVPSAKCYFSIACYLHSRYKAGASSTYKKNGKPAAIQYGTGSIAGYFSEDSVTVGDLVVKDQEFIEATKEPGITF 153 (478)
T ss_dssp TCCCCEEEBTTCCSCGGGGGSCCBCGGGCTTCBCCCCEEEEEETTEEEEEEEEEEEEEETTEEEEEEEEEEEEECCBSHH
T ss_pred CCcceEEecCCCCCCccccCCCCCCcccCCCeeeCCcEEEEEcCCCCeEEEEEEEEEEECCeEECCEEEEEEEecCCccc
Confidence 99999999999964568999999999999999999999999999999999999999999999999999999998766556
Q ss_pred cccccceEEeccccccccCccCchhhhhhhcCCCCCCeEEEEecCCCCCCCCeeEEECccCCCCcccccEEEecccccce
Q 011143 189 LAAKFDGILGLGFQEISIGKAIPVWYNMLDQGLVKEPVFSFWLNRDIEGEEGGEIVFGGVDPDHYKGEHTYVPVTKKGYW 268 (492)
Q Consensus 189 ~~~~~dGILGLG~~~~s~~~~~~~~~~L~~qg~I~~~~FSl~L~~~~~~~~~G~L~fGgiD~~~y~G~l~~~pv~~~~~w 268 (492)
....++||||||++..+.....|++++|++||+|++++||+||++..+...+|+|+|||+|+++|.|++.|+|+.+.+||
T Consensus 154 ~~~~~dGIlGLg~~~~s~~~~~p~~~~l~~qg~i~~~~FS~~L~~~~~~~~~G~l~fGg~d~~~~~G~l~~~pv~~~~~w 233 (478)
T 1qdm_A 154 LVAKFDGILGLGFKEISVGKAVPVWYKMIEQGLVSDPVFSFWLNRHVDEGEGGEIIFGGMDPKHYVGEHTYVPVTQKGYW 233 (478)
T ss_dssp HHCSSSEEEECSCGGGCGGGCCCHHHHHTTTTCCSSSEEEEECCCC-----CEEEEETCCCTTSEEEEEEEEEEEEETTE
T ss_pred ccccccceecccccccccCCCCcHHHHHHHCCCCCCCEEEEEeecCCCCCCCeEEEeCCcCHhhcCCCceEEeccCCCeE
Confidence 66778999999999988777888999999999999999999998864333489999999999999999999999999999
Q ss_pred EEEeeeEEEcCeeeeecCCCceEEEcCCcccccccHHHHHHHHHHhCCCcceecccccccccchhhHHHHHHhhcCcccc
Q 011143 269 QFEMGDVLIDGETTGYCSTGCNAIADSGTSLLAGPTTIITQINHAIGASGVISQECKTLVDQYGKTILEMLIAETQPQKI 348 (492)
Q Consensus 269 ~v~l~~i~vgg~~~~~~~~~~~aiiDTGTt~i~lP~~~~~~l~~~i~a~~~~~~~C~~~~~~fg~~~~~~~~~~~~~~~~ 348 (492)
.|.+++|.||++.+.++..+..+||||||+++++|.+++++|.+++++.+.++.+|+..+..||+.++++++++..|+.+
T Consensus 234 ~v~l~~i~v~g~~~~~~~~~~~aiiDTGTs~~~lP~~~~~~i~~~i~a~~~~s~~Ck~~v~~yg~~ii~~l~~~~~p~~v 313 (478)
T 1qdm_A 234 QFDMGDVLVGGKSTGFCAGGCAAIADSGTSLLAGPTAIITEINEKIGAAGVVSQECKTIVSQYGQQILDLLLAETQPKKI 313 (478)
T ss_dssp EEEECCEEETTEECSTTTTCEEEEECSSCCSEEECHHHHHHHHHHHTCCCBCCHHHHHHHHHTHHHHHHHHHTTCCHHHH
T ss_pred EEEEeEEEECCEEEeecCCCceEEEcCCCCceeCCHHHHHHHHHHhCccccccccccchhhhhhhHHHHhhhhccChhhh
Confidence 99999999999887666678899999999999999999999999999999999999999999999999999999999999
Q ss_pred cccccccccCCCcCcccccceeeccCCCCCCCCCCCCccchhhHHHHHHHHHHhhhcccHHHHHHHHHhhcCCCCCCccc
Q 011143 349 CSQMGLCTFDGTRGFSMGIESVIDKSSDKSSDGVHDSAMCSACEMAVIWMQNKLRRNETADQILNYVNQLCDRLPSPNGE 428 (492)
Q Consensus 349 ~~~~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~~ 428 (492)
|++.|+|.+.+....+++++++++++.+++ .+.+++.+|++|||+|.|++|+|.+|.|.++|+++++++|.+++.+.|.
T Consensus 314 C~~iglC~~~~~~~~~~~~~~v~~~~~~~~-~~~~~~~~C~~Ce~~v~~~~~~l~~n~t~~~I~~~~~~~C~~~~~~~g~ 392 (478)
T 1qdm_A 314 CSQVGLCTFDGTRGVSAGIRSVVDDEPVKS-NGLRADPMCSACEMAVVWMQNQLAQNKTQDLILDYVNQLCNRLPSPMGE 392 (478)
T ss_dssp HHHTTCC----------------------------CHHHHHHHHHHHHHHHHHHHTTCCHHHHHHHHHHHTTCBCCSSSC
T ss_pred hccccccccCcccccccccccccccccccc-ccccccccchHHHHHHHHHHHHHhccccHHHHHHHHHHHhhccCCCCCe
Confidence 999999999999999999999999876554 4668899999999999999999999999999999999999999999999
Q ss_pred ccccccccCCCCcEEEEECCEEEeeCccceEEEecCC
Q 011143 429 SAVDCDNLSSMPNVSFTIGGKVFDLAPNEVWLYADFE 465 (492)
Q Consensus 429 ~~~~c~~~~~~p~i~~~~~g~~~~l~~~~y~~~~~~~ 465 (492)
|.|+|+.+.++|+|+|+|+|+.|+|+|++|+++...+
T Consensus 393 ~~v~C~~~~~lP~i~f~~gg~~~~l~p~~yi~~~~~~ 429 (478)
T 1qdm_A 393 SAVDCGSLGSMPDIEFTIGGKKFALKPEEYILKVGEG 429 (478)
T ss_dssp CEECGGGGTTCCCEEEEETTEEEEECHHHHEEECSCG
T ss_pred EEeecccccccccEEEEECCEEEEEChHHhEEEccCC
Confidence 9999999999999999999999999999999997653
No 2
>3psg_A Pepsinogen; hydrolase(acid proteinase zymogen); 1.65A {Sus scrofa} SCOP: b.50.1.2 PDB: 2psg_A 4pep_A* 3pep_A* 1f34_A* 1psa_A* 1yx9_A 5pep_A 1flh_A 1qrp_E* 1psn_A* 1pso_E* 3utl_A
Probab=100.00 E-value=3e-60 Score=490.29 Aligned_cols=318 Identities=40% Similarity=0.731 Sum_probs=281.1
Q ss_pred eEEEeeeecCcchhhhcccCcccchhhhcccccccccCCCCCCC---CCcceEeccccCCceEEEEEEEcCCCceEEEEE
Q 011143 30 LVRIGLRKKKLDQINRLVGQTVSKEEETMRTPVRRYNLHGSLGD---SDTDIVALNNFMDAQYFGEVSIGTPSQTFTVIF 106 (492)
Q Consensus 30 ~~ripL~r~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~---~~~~~~pl~n~~d~~Y~~~I~IGTP~Q~~~v~l 106 (492)
++||||+|.++.|+.+.+.+..++ +|+. |+++++.+... .....+||.|+.|.+|+++|+||||||+|+|++
T Consensus 1 ~~~ipl~~~~s~r~~~~~~~~~~~---~~~~--~~~~~~~~~~~~~~~~~~~~~l~n~~d~~Y~~~i~iGTPpQ~~~v~~ 75 (370)
T 3psg_A 1 LVKVPLVRKKSLRQNLIKDGKLKD---FLKT--HKHNPASKYFPEAAALIGDEPLENYLDTEYFGTIGIGTPAQDFTVIF 75 (370)
T ss_dssp CEEEEEEECCCHHHHHHHTTCHHH---HHHH--CCCCGGGGTCTTSCCSSCCCTTGGGTTCCEEEEEEETTTTEEEEEEE
T ss_pred CEEEEeEEcCcHHHHHHhcCcHHH---HHhh--hhcchhhhhccccccccceecceeccCCEEEEEEEEcCCCCEEEEEE
Confidence 479999999999999998887655 4442 23332222111 134679999999999999999999999999999
Q ss_pred eCCCCceeeeCCCCCCCcCCCCCCCCCCCCCCceeECCeeEEEEecCCeeEEEEEEeEeEeeeeeeecceEEEEEecccc
Q 011143 107 DTGSSNLWVPSAKCYFSVSCYFHSKYKSSHSSTYKRNGTSAAIQYGTGAISGFFSQDNVKVGDLVVKNQDFIEATKEASI 186 (492)
Q Consensus 107 DTGSs~~WV~s~~C~~~~~C~~~~~y~p~~SsT~~~~~~~~~~~Yg~Gsv~G~~~~Dtv~lg~~~v~~~~Fg~a~~~~~~ 186 (492)
||||+++||++..|. ...|..++.|+|++|+||+..++.|.+.|++|++.|.+++|+|++++.+++++.||++....+.
T Consensus 76 DTGSs~lWV~s~~C~-~~~C~~~~~y~~~~SsT~~~~~~~~~i~Yg~Gs~~G~~~~Dtv~ig~~~v~~~~Fg~a~~~~~~ 154 (370)
T 3psg_A 76 DTGSSNLWVPSVYCS-SLACSDHNQFNPDDSSTFEATSQELSITYGTGSMTGILGYDTVQVGGISDTNQIFGLSETEPGS 154 (370)
T ss_dssp ETTCCCEEEEBTTCC-SGGGTTSCCBCGGGCTTCEEEEEEEEEESSSCEEEEEEEEEEEEETTEEEEEEEEEEECSCCCG
T ss_pred eCCCCccEEECCCCC-CcccCCCCCCCCccCcCcEECCcEEEEEeCCceEEEEEEEEEEeeCCcccCCeEEEEEEeeccc
Confidence 999999999999996 5689999999999999999999999999999999999999999999999999999999987666
Q ss_pred cccccccceEEeccccccccCccCchhhhhhhcCCCCCCeEEEEecCCCCCCCCeeEEECccCCCCcccccEEEeccccc
Q 011143 187 TFLAAKFDGILGLGFQEISIGKAIPVWYNMLDQGLVKEPVFSFWLNRDIEGEEGGEIVFGGVDPDHYKGEHTYVPVTKKG 266 (492)
Q Consensus 187 ~~~~~~~dGILGLG~~~~s~~~~~~~~~~L~~qg~I~~~~FSl~L~~~~~~~~~G~L~fGgiD~~~y~G~l~~~pv~~~~ 266 (492)
.+....++||||||++..+.....|++++|++||+|++++||+||++.. ..+|+|+|||+|+++|.|+++|+|+.+.+
T Consensus 155 ~~~~~~~dGIlGLg~~~~s~~~~~~~~~~l~~qg~i~~~~FS~~L~~~~--~~~G~l~fGg~D~~~y~g~l~~~pv~~~~ 232 (370)
T 3psg_A 155 FLYYAPFDGILGLAYPSISASGATPVFDNLWDQGLVSQDLFSVYLSSND--DSGSVVLLGGIDSSYYTGSLNWVPVSVEG 232 (370)
T ss_dssp GGGGCSCSEEEECSCGGGCGGGCCCHHHHHHHTTCSSSSEEEEEEC-------CEEEEETCCCGGGBSSCCEEEECSEET
T ss_pred ccccCCccceeccCCccccccCCCCHHHHHHHCCCCCCCEEEEEEccCC--CCCeEEEEEeeChHhcCCcceeecccccc
Confidence 6777788999999999988888889999999999999999999999862 23899999999999999999999999999
Q ss_pred ceEEEeeeEEEcCeeeeecCCCceEEEcCCcccccccHHHHHHHHHHhCCCcceecccccccccchhhHHHHHHhhcCcc
Q 011143 267 YWQFEMGDVLIDGETTGYCSTGCNAIADSGTSLLAGPTTIITQINHAIGASGVISQECKTLVDQYGKTILEMLIAETQPQ 346 (492)
Q Consensus 267 ~w~v~l~~i~vgg~~~~~~~~~~~aiiDTGTt~i~lP~~~~~~l~~~i~a~~~~~~~C~~~~~~fg~~~~~~~~~~~~~~ 346 (492)
||.|.+++|+||++.+. +..++.+++||||+++++|.+++++|.+++++..
T Consensus 233 ~w~v~l~~i~v~g~~~~-~~~~~~aiiDTGTs~~~lP~~~~~~i~~~i~a~~---------------------------- 283 (370)
T 3psg_A 233 YWQITLDSITMDGETIA-CSGGCQAIVDTGTSLLTGPTSAIANIQSDIGASE---------------------------- 283 (370)
T ss_dssp TEEEEECEEESSSSEEE-CTTCEEEEECTTCCSEEEEHHHHHHHHHHTTCEE----------------------------
T ss_pred eeEEEEeEEEECCEEEe-cCCCceEEEcCCCCcEECCHHHHHHHHHHhCCcc----------------------------
Confidence 99999999999998875 5678899999999999999999999999998861
Q ss_pred cccccccccccCCCcCcccccceeeccCCCCCCCCCCCCccchhhHHHHHHHHHHhhhcccHHHHHHHHHhhcCCCCCCc
Q 011143 347 KICSQMGLCTFDGTRGFSMGIESVIDKSSDKSSDGVHDSAMCSACEMAVIWMQNKLRRNETADQILNYVNQLCDRLPSPN 426 (492)
Q Consensus 347 ~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~c~~~~~~~ 426 (492)
...
T Consensus 284 -----------------------------------------------------------------------------~~~ 286 (370)
T 3psg_A 284 -----------------------------------------------------------------------------NSD 286 (370)
T ss_dssp -----------------------------------------------------------------------------CTT
T ss_pred -----------------------------------------------------------------------------cCC
Confidence 235
Q ss_pred ccccccccccCCCCcEEEEECCEEEeeCccceEEE
Q 011143 427 GESAVDCDNLSSMPNVSFTIGGKVFDLAPNEVWLY 461 (492)
Q Consensus 427 ~~~~~~c~~~~~~p~i~~~~~g~~~~l~~~~y~~~ 461 (492)
|.|.|+|+.+.++|+|+|+|+|++|+|+|++|+++
T Consensus 287 g~~~v~C~~~~~lP~i~f~~~g~~~~l~~~~yi~~ 321 (370)
T 3psg_A 287 GEMVISCSSIDSLPDIVFTIDGVQYPLSPSAYILQ 321 (370)
T ss_dssp CCEECCGGGGGGCCCEEEEETTEEEEECHHHHEEE
T ss_pred CcEEEECCCcccCCcEEEEECCEEEEECHHHhccc
Confidence 77999999999999999999999999999999998
No 3
>2x0b_A Renin; hydrolase-hormone complex, hydrolase hormone complex, vasoconstrictor, glycoprotein, hypertension, serpins; 4.33A {Homo sapiens}
Probab=100.00 E-value=3.3e-59 Score=484.22 Aligned_cols=324 Identities=39% Similarity=0.715 Sum_probs=256.3
Q ss_pred CceEEEeeeecCcchhhhcccCc-ccchhhhcccccccccCCCCCCCCCcceEeccccCCceEEEEEEEcCCCceEEEEE
Q 011143 28 DGLVRIGLRKKKLDQINRLVGQT-VSKEEETMRTPVRRYNLHGSLGDSDTDIVALNNFMDAQYFGEVSIGTPSQTFTVIF 106 (492)
Q Consensus 28 ~~~~ripL~r~~~~~~~~~~~~~-~~~~~~~l~~~~~~~~~~~~~~~~~~~~~pl~n~~d~~Y~~~I~IGTP~Q~~~v~l 106 (492)
++++||||+|+++.|+.+.+.+. .++ +++++...++...+. .....+||.|+.|.+|+++|+||||||+|+|+|
T Consensus 6 ~~~~~i~l~k~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~--~~~~~~~l~n~~~~~Y~~~I~IGTP~Q~f~vi~ 80 (383)
T 2x0b_A 6 TTFKRIFLKRMPSIRESLKERGVDMAR---LGPEWSQPMKRLTLG--NTTSSVILTNYMDTQYYGEIGIGTPPQTFKVVF 80 (383)
T ss_dssp --------------------------------------------------CEEEEEEETTTEEEEEEEETTTTEEEEEEE
T ss_pred CcEEEEEEEECCcHHHHHHHhCchHHH---HHHhhcccccccccc--CCcceEeeeecCCCEEEEEEEECCCCcEEEEEE
Confidence 35899999999999888877665 322 332111000110000 124569999999999999999999999999999
Q ss_pred eCCCCceeeeCCCCCC-CcCCCCCCCCCCCCCCceeECCeeEEEEecCCeeEEEEEEeEeEeeeeeeecceEEEEEeccc
Q 011143 107 DTGSSNLWVPSAKCYF-SVSCYFHSKYKSSHSSTYKRNGTSAAIQYGTGAISGFFSQDNVKVGDLVVKNQDFIEATKEAS 185 (492)
Q Consensus 107 DTGSs~~WV~s~~C~~-~~~C~~~~~y~p~~SsT~~~~~~~~~~~Yg~Gsv~G~~~~Dtv~lg~~~v~~~~Fg~a~~~~~ 185 (492)
||||+++||++..|.. ...|..|+.|+|++|+||+..++.|.+.|++|+++|.+++|+|++++.+++ +.||++....+
T Consensus 81 DTGSs~lWV~s~~C~~~~~~C~~~~~y~~~~SsT~~~~~~~~~i~Yg~Gs~~G~~~~Dtv~ig~~~v~-~~Fg~a~~~~g 159 (383)
T 2x0b_A 81 DTGSSNVWVPSSKCSRLYTACVYHKLFDASDSSSYKHNGTELTLRYSTGTVSGFLSQDIITVGGITVT-QMFGEVTEMPA 159 (383)
T ss_dssp ETTCCCEEEEBTTSCTTSHHHHTSCCBCGGGCTTCEEEEEEEEEECSSCEEEEEEEEEEEEETTEEEE-EEEEEEEECCH
T ss_pred eCCCCCeEEeccCCCCCcccccCCCCCCCCCCCcEEECCcEEEEEcCCccEEEEEEeeEEEEcCceEE-EEEEEEEecCC
Confidence 9999999999999952 358999999999999999999999999999999999999999999999999 99999998776
Q ss_pred ccccccccceEEeccccccccCccCchhhhhhhcCCCCCCeEEEEecCCCCCC--CCeeEEECccCCCCcccccEEEecc
Q 011143 186 ITFLAAKFDGILGLGFQEISIGKAIPVWYNMLDQGLVKEPVFSFWLNRDIEGE--EGGEIVFGGVDPDHYKGEHTYVPVT 263 (492)
Q Consensus 186 ~~~~~~~~dGILGLG~~~~s~~~~~~~~~~L~~qg~I~~~~FSl~L~~~~~~~--~~G~L~fGgiD~~~y~G~l~~~pv~ 263 (492)
..|....+|||||||++..+.....|++++|++||+|++++||+||++..+.. .+|+|+|||+|+++|+|+++|+|+.
T Consensus 160 ~~f~~~~~dGIlGLg~~~~s~~~~~~~~~~l~~qg~i~~~~FS~~L~~~~~~~~~~~G~l~fGg~d~~~y~G~l~~~pv~ 239 (383)
T 2x0b_A 160 LPFMLAEFDGVVGMGFIEQAIGRVTPIFDNIISQGVLKEDVFSFYYNRDSENSQSLGGQIVLGGSDPQHYEGNFHYINLI 239 (383)
T ss_dssp HHHTTCSSSEEEECSCGGGCGGGCCCHHHHHHTTTCCSSSEEEEEECCSCC----CCEEEEESSCCGGGEEEEEEEEEBS
T ss_pred cccccCCCceEeccCCCccccCCCCcHHHHHHhCCCCCCCEEEEEEcCCCCcccCCCcEEEECCcChHHcCCceEEEEcC
Confidence 55666788999999999988878889999999999999999999999864321 3799999999999999999999999
Q ss_pred cccceEEEeeeEEEcCeeeeecCCCceEEEcCCcccccccHHHHHHHHHHhCCCcceecccccccccchhhHHHHHHhhc
Q 011143 264 KKGYWQFEMGDVLIDGETTGYCSTGCNAIADSGTSLLAGPTTIITQINHAIGASGVISQECKTLVDQYGKTILEMLIAET 343 (492)
Q Consensus 264 ~~~~w~v~l~~i~vgg~~~~~~~~~~~aiiDTGTt~i~lP~~~~~~l~~~i~a~~~~~~~C~~~~~~fg~~~~~~~~~~~ 343 (492)
+.+||.|.+++|.||++.+. +..++.||+||||+++++|.+++++|.+++++.
T Consensus 240 ~~~~w~v~l~~i~v~~~~~~-~~~~~~aiiDTGTs~~~lP~~~~~~i~~~i~a~-------------------------- 292 (383)
T 2x0b_A 240 KTGVWQIQMKGVSVGSSTLL-CEDGCLALVDTGASYISGSTSSIEKLMEALGAK-------------------------- 292 (383)
T ss_dssp STTSCEEEECEEEESSCCCB-STTCEEEEECTTCSSEEECHHHHHHHHHHHTCE--------------------------
T ss_pred CCceEEEEEeEEEeCCceEE-cCCCcEEEEcCCCceEEcCHHHHHHHHHHhCCc--------------------------
Confidence 99999999999999998753 567889999999999999999999999999876
Q ss_pred CcccccccccccccCCCcCcccccceeeccCCCCCCCCCCCCccchhhHHHHHHHHHHhhhcccHHHHHHHHHhhcCCCC
Q 011143 344 QPQKICSQMGLCTFDGTRGFSMGIESVIDKSSDKSSDGVHDSAMCSACEMAVIWMQNKLRRNETADQILNYVNQLCDRLP 423 (492)
Q Consensus 344 ~~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~c~~~~ 423 (492)
+
T Consensus 293 -------------------------------------------------------------------------------~ 293 (383)
T 2x0b_A 293 -------------------------------------------------------------------------------K 293 (383)
T ss_dssp -------------------------------------------------------------------------------E
T ss_pred -------------------------------------------------------------------------------c
Confidence 1
Q ss_pred CCcccccccccccCCCCcEEEEECCEEEeeCccceEEEecC
Q 011143 424 SPNGESAVDCDNLSSMPNVSFTIGGKVFDLAPNEVWLYADF 464 (492)
Q Consensus 424 ~~~~~~~~~c~~~~~~p~i~~~~~g~~~~l~~~~y~~~~~~ 464 (492)
..|.|.++|+.+.++|+|+|+|+|++|+|+|++|+++...
T Consensus 294 -~~g~~~v~C~~~~~~P~i~f~~~g~~~~l~~~~yi~~~~~ 333 (383)
T 2x0b_A 294 -RLFDYVVKCNEGPTLPDISFHLGGKEYTLTSADYVFQESY 333 (383)
T ss_dssp -CSSCEEEEGGGTTTCCCEEEEETTEEEEECHHHHBCCCCC
T ss_pred -cCCcEEEeccccccCceEEEEECCEEEEECHHHhEeeccC
Confidence 2467889999999999999999999999999999998754
No 4
>3cms_A Chymosin B; hydrolase, acid proteinase; 2.00A {Bos taurus} SCOP: b.50.1.2 PDB: 4cms_A 1czi_E* 1cms_A
Probab=100.00 E-value=2.1e-53 Score=431.22 Aligned_cols=276 Identities=42% Similarity=0.770 Sum_probs=252.6
Q ss_pred cceEeccccCCceEEEEEEEcCCCceEEEEEeCCCCceeeeCCCCCCCcCCCCCCCCCCCCCCceeECCeeEEEEecCCe
Q 011143 76 TDIVALNNFMDAQYFGEVSIGTPSQTFTVIFDTGSSNLWVPSAKCYFSVSCYFHSKYKSSHSSTYKRNGTSAAIQYGTGA 155 (492)
Q Consensus 76 ~~~~pl~n~~d~~Y~~~I~IGTP~Q~~~v~lDTGSs~~WV~s~~C~~~~~C~~~~~y~p~~SsT~~~~~~~~~~~Yg~Gs 155 (492)
...+||.|+.+.+|+++|.||||||+++|++||||+++||++..|. ...|..++.|+|++|+||+..++.|.+.|++|+
T Consensus 3 ~~~~~l~n~~~~~Y~~~i~iGtP~q~~~v~~DTGSs~~Wv~~~~C~-~~~C~~~~~y~~~~SsT~~~~~~~~~i~Yg~Gs 81 (323)
T 3cms_A 3 VASVPLTNYLDSQYFGKIYLGTPPQEFTVLFDTGSSDFWVPSIYCK-SNACKNHQRFDPRKSSTFQNLGKPLSIHYGTGS 81 (323)
T ss_dssp CEEEEEEEETTTEEEEEEEETTTTEEEEEEEETTCCCEEEEBTTCC-SHHHHTSCCBCGGGCTTCEEEEEEEEEEETTEE
T ss_pred cceeeeEeccCCEEEEEEEECCCCeEEEEEEeCCccceEEcCCCCC-cccccCCCCCCCccCCCeEECCcEEEEEeCCCC
Confidence 4568999999999999999999999999999999999999999995 468998999999999999999999999999999
Q ss_pred eEEEEEEeEeEeeeeeeecceEEEEEecccccccccccceEEeccccccccCccCchhhhhhhcCCCCCCeEEEEecCCC
Q 011143 156 ISGFFSQDNVKVGDLVVKNQDFIEATKEASITFLAAKFDGILGLGFQEISIGKAIPVWYNMLDQGLVKEPVFSFWLNRDI 235 (492)
Q Consensus 156 v~G~~~~Dtv~lg~~~v~~~~Fg~a~~~~~~~~~~~~~dGILGLG~~~~s~~~~~~~~~~L~~qg~I~~~~FSl~L~~~~ 235 (492)
+.|.+++|+|++++.+++++.||++....+..+....++||||||++..+.....+++++|++||.|++++||+||++..
T Consensus 82 ~~G~~~~D~v~ig~~~~~~~~fg~~~~~~~~~~~~~~~~GilGLg~~~~s~~~~~~~~~~l~~q~~i~~~~FS~~l~~~~ 161 (323)
T 3cms_A 82 MQGILGYDTVTVSNIVDIQQTVGLSTQEPGDFFTYAEFDGILGMAYPSLASEYSIPVFDNMMNRHLVAQDLFSVYMDRNG 161 (323)
T ss_dssp EEEEEEEEEEEETTEEEEEEEEEEEEECCSHHHHHSSCSEEEECSCGGGSCTTCCCHHHHHHHTTCSSSSEEEEECCTTS
T ss_pred eEEEEEEEEEEECCeEEeccEEEEEEecccccccccCCceEEecCcchhhccCCCCHHHHHHHCCCCCCCEEEEEECCCC
Confidence 99999999999999999999999999876544555678999999999888777889999999999999999999998863
Q ss_pred CCCCCeeEEECccCCCCcccccEEEecccccceEEEeeeEEEcCeeeeecCCCceEEEcCCcccccccHHHHHHHHHHhC
Q 011143 236 EGEEGGEIVFGGVDPDHYKGEHTYVPVTKKGYWQFEMGDVLIDGETTGYCSTGCNAIADSGTSLLAGPTTIITQINHAIG 315 (492)
Q Consensus 236 ~~~~~G~L~fGgiD~~~y~G~l~~~pv~~~~~w~v~l~~i~vgg~~~~~~~~~~~aiiDTGTt~i~lP~~~~~~l~~~i~ 315 (492)
. .|+|+|||+|+++|.|++.|+|+.+.+||.|.+++|.|+++.+. +..+..++|||||+++++|++++++|.++++
T Consensus 162 ~---~G~l~fGg~d~~~~~g~l~~~p~~~~~~~~v~l~~i~v~~~~~~-~~~~~~aiiDSGTt~~~lP~~~~~~l~~~~~ 237 (323)
T 3cms_A 162 Q---ESMLTLGAIDPSYYTGSLHWVPVTVQQYWQFTVDSVTISGVVVA-CEGGCQAILDTGTSKLVGPSSDILNIQQAIG 237 (323)
T ss_dssp S---CEEEEESCCCGGGEEEEEEEEECSSBTTBEEEEEEEEETTEEEE-STTCEEEEECTTCCSEEECHHHHHHHHHHHT
T ss_pred C---CEEEEECCCChhhccCceEEEECccCCeEEEEEeeEEECCEEee-cCCCcEEEEecCCccEeCCHHHHHHHHHHhC
Confidence 3 49999999999999999999999999999999999999998875 3467899999999999999999999999998
Q ss_pred CCcceecccccccccchhhHHHHHHhhcCcccccccccccccCCCcCcccccceeeccCCCCCCCCCCCCccchhhHHHH
Q 011143 316 ASGVISQECKTLVDQYGKTILEMLIAETQPQKICSQMGLCTFDGTRGFSMGIESVIDKSSDKSSDGVHDSAMCSACEMAV 395 (492)
Q Consensus 316 a~~~~~~~C~~~~~~fg~~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 395 (492)
+..
T Consensus 238 ~~~----------------------------------------------------------------------------- 240 (323)
T 3cms_A 238 ATQ----------------------------------------------------------------------------- 240 (323)
T ss_dssp CEE-----------------------------------------------------------------------------
T ss_pred Cee-----------------------------------------------------------------------------
Confidence 761
Q ss_pred HHHHHHhhhcccHHHHHHHHHhhcCCCCCCcccccccccccCCCCcEEEEECCEEEeeCccceEEE
Q 011143 396 IWMQNKLRRNETADQILNYVNQLCDRLPSPNGESAVDCDNLSSMPNVSFTIGGKVFDLAPNEVWLY 461 (492)
Q Consensus 396 ~~~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~c~~~~~~p~i~~~~~g~~~~l~~~~y~~~ 461 (492)
...+.|.++|+...++|+|+|.|+|++++|+|++|+++
T Consensus 241 ----------------------------~~~g~~~~~C~~~~~~P~i~f~f~g~~~~i~~~~y~~~ 278 (323)
T 3cms_A 241 ----------------------------NQYGEFDIDCDNLSYMPTVVFEINGKMYPLTPSAYTSQ 278 (323)
T ss_dssp ----------------------------ETTTEEEECTTCTTTSCCEEEEETTEEEEECHHHHEEE
T ss_pred ----------------------------cCCCcEEEECCCCccCceEEEEECCEEEEECHHHhccC
Confidence 12467889999988999999999999999999999998
No 5
>4aa9_A Chymosin; hydrolase, aspartic peptidase, rennet; HET: NAG; 1.60A {Camelus dromedarius} PDB: 4aa8_A 1czi_E* 1cms_A 4cms_A 3cms_A
Probab=100.00 E-value=2e-53 Score=430.53 Aligned_cols=274 Identities=42% Similarity=0.783 Sum_probs=247.3
Q ss_pred eEeccccCCceEEEEEEEcCCCceEEEEEeCCCCceeeeCCCCCCCcCCCCCCCCCCCCCCceeECCeeEEEEecCCeeE
Q 011143 78 IVALNNFMDAQYFGEVSIGTPSQTFTVIFDTGSSNLWVPSAKCYFSVSCYFHSKYKSSHSSTYKRNGTSAAIQYGTGAIS 157 (492)
Q Consensus 78 ~~pl~n~~d~~Y~~~I~IGTP~Q~~~v~lDTGSs~~WV~s~~C~~~~~C~~~~~y~p~~SsT~~~~~~~~~~~Yg~Gsv~ 157 (492)
.+||.|+.|.+|+++|+||||||+++|++||||+++||++..|. ...|..++.|+|++|+||+..++.|.+.|++|++.
T Consensus 2 ~~~l~n~~d~~Y~~~i~iGtP~Q~~~v~~DTGSs~~Wv~~~~C~-~~~C~~~~~y~~~~SsT~~~~~~~~~i~Yg~gs~~ 80 (320)
T 4aa9_A 2 REPLTSYLDSQYFGKIYIGTPPQEFTVVFDTGSSDLWVPSIYCK-SNVCKNHHRFDPRKSSTFRNLGKPLSIHYGTGSME 80 (320)
T ss_dssp ------CCCCCCEEEEEETTTTEEEEEEEETTCCCEEEEBTTCC-SHHHHTSCCBCGGGCTTCEEEEEEEEEEETTEEEE
T ss_pred CccceeccCCEEEEEEEECCCCeEEEEEEeCCCCceEEcCCCCC-ccccCCCCCCCCCCCcCeEcCCcEEEEEECCcEEE
Confidence 47999999999999999999999999999999999999999996 56898899999999999999999999999999999
Q ss_pred EEEEEeEeEeeeeeeecceEEEEEecccccccccccceEEeccccccccCccCchhhhhhhcCCCCCCeEEEEecCCCCC
Q 011143 158 GFFSQDNVKVGDLVVKNQDFIEATKEASITFLAAKFDGILGLGFQEISIGKAIPVWYNMLDQGLVKEPVFSFWLNRDIEG 237 (492)
Q Consensus 158 G~~~~Dtv~lg~~~v~~~~Fg~a~~~~~~~~~~~~~dGILGLG~~~~s~~~~~~~~~~L~~qg~I~~~~FSl~L~~~~~~ 237 (492)
|.+++|+|++++.+++++.||++....+..+....++||||||++..+.....+++++|++||+|++++||+||++.
T Consensus 81 G~~~~D~v~ig~~~v~~~~fg~~~~~~~~~~~~~~~~GilGLg~~~~s~~~~~~~~~~l~~~g~i~~~~Fs~~l~~~--- 157 (320)
T 4aa9_A 81 GFLGYDTVTVSNIVDPNQTVGLSTEQPGEVFTYSEFDGILGLAYPSLASEYSVPVFDNMMDRHLVARDLFSVYMDRN--- 157 (320)
T ss_dssp EEEEEEEEEETTEEEEEEEEEEEEECCSHHHHSCCCSEEEECSCGGGSCTTCCCHHHHHHHTTCSSSSEEEEECCSS---
T ss_pred EEEEEEEEEECCEeecCeEEEEEEEcccccccccCcccEEecCcccccccCCCCHHHHHHhCCCCCCceEEEEeCCC---
Confidence 99999999999999999999999987665566667899999999988877788999999999999999999999885
Q ss_pred CCCeeEEECccCCCCcccccEEEecccccceEEEeeeEEEcCeeeeecCCCceEEEcCCcccccccHHHHHHHHHHhCCC
Q 011143 238 EEGGEIVFGGVDPDHYKGEHTYVPVTKKGYWQFEMGDVLIDGETTGYCSTGCNAIADSGTSLLAGPTTIITQINHAIGAS 317 (492)
Q Consensus 238 ~~~G~L~fGgiD~~~y~G~l~~~pv~~~~~w~v~l~~i~vgg~~~~~~~~~~~aiiDTGTt~i~lP~~~~~~l~~~i~a~ 317 (492)
...|+|+|||+|+++|.|++.|+|+.+.++|.|.+++|.|+++.+. +.....++|||||+++++|++++++|++++++.
T Consensus 158 ~~~G~l~fGg~d~~~~~g~l~~~p~~~~~~w~v~l~~i~v~~~~~~-~~~~~~~iiDsGtt~~~lP~~~~~~i~~~~~~~ 236 (320)
T 4aa9_A 158 GQGSMLTLGAIDPSYYTGSLHWVPVTLQQYWQFTVDSVTINGVAVA-CVGGCQAILDTGTSVLFGPSSDILKIQMAIGAT 236 (320)
T ss_dssp SSCCEEEETCCCGGGEEEEEEEEECSSBTTBEEEECEEEETTEEEE-STTCEEEEECTTCSSEEEEHHHHHHHHHHTTCE
T ss_pred CCCeEEEEcccCHHHccCceEEEEcccCCceEEEEeEEEECCEEec-cCCCcEEEEECCCCcEECCHHHHHHHHHHhCCc
Confidence 2389999999999999999999999999999999999999998875 345789999999999999999999999999876
Q ss_pred cceecccccccccchhhHHHHHHhhcCcccccccccccccCCCcCcccccceeeccCCCCCCCCCCCCccchhhHHHHHH
Q 011143 318 GVISQECKTLVDQYGKTILEMLIAETQPQKICSQMGLCTFDGTRGFSMGIESVIDKSSDKSSDGVHDSAMCSACEMAVIW 397 (492)
Q Consensus 318 ~~~~~~C~~~~~~fg~~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 397 (492)
.
T Consensus 237 ~------------------------------------------------------------------------------- 237 (320)
T 4aa9_A 237 E------------------------------------------------------------------------------- 237 (320)
T ss_dssp E-------------------------------------------------------------------------------
T ss_pred c-------------------------------------------------------------------------------
Confidence 1
Q ss_pred HHHHhhhcccHHHHHHHHHhhcCCCCCCcccccccccccCCCCcEEEEECCEEEeeCccceEEE
Q 011143 398 MQNKLRRNETADQILNYVNQLCDRLPSPNGESAVDCDNLSSMPNVSFTIGGKVFDLAPNEVWLY 461 (492)
Q Consensus 398 ~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~c~~~~~~p~i~~~~~g~~~~l~~~~y~~~ 461 (492)
...+.|.++|+...++|+|+|.|+|++++|+|++|+.+
T Consensus 238 --------------------------~~~g~~~~~C~~~~~~p~i~f~f~g~~~~l~~~~y~~~ 275 (320)
T 4aa9_A 238 --------------------------NRYGEFDVNCGNLRSMPTVVFEINGRDYPLSPSAYTSK 275 (320)
T ss_dssp --------------------------CTTSCEEECGGGGGGCCCEEEEETTEEEEECHHHHEEE
T ss_pred --------------------------cCCCcEEEeCCCCCcCceEEEEECCEEEEECHHHhccC
Confidence 13567889999988999999999999999999999976
No 6
>1tzs_A Cathepsin E; hydrolase, aspartic protease, activation intermediate; 2.35A {Homo sapiens}
Probab=100.00 E-value=3.4e-53 Score=434.56 Aligned_cols=281 Identities=47% Similarity=0.861 Sum_probs=253.0
Q ss_pred cceEeccccCCceEEEEEEEcCCCceEEEEEeCCCCceeeeCCCCCCCcCCCCCCCCCCCCCCceeECCeeEEEEecCCe
Q 011143 76 TDIVALNNFMDAQYFGEVSIGTPSQTFTVIFDTGSSNLWVPSAKCYFSVSCYFHSKYKSSHSSTYKRNGTSAAIQYGTGA 155 (492)
Q Consensus 76 ~~~~pl~n~~d~~Y~~~I~IGTP~Q~~~v~lDTGSs~~WV~s~~C~~~~~C~~~~~y~p~~SsT~~~~~~~~~~~Yg~Gs 155 (492)
...+||.|+.+.+|+++|.||||||+++|++||||+++||++..|. ...|..++.|+|++|+||+..++.|.+.|++|+
T Consensus 12 ~~~~~l~n~~~~~Y~~~i~iGtP~Q~~~v~~DTGSs~lWv~~~~C~-~~~C~~~~~y~~~~SsT~~~~~~~~~i~Yg~Gs 90 (351)
T 1tzs_A 12 SAKEPLINYLDMEYFGTISIGSPPQNFTVIFDTGSSNLWVPSVYCT-SPACKTHSRFQPSQSSTYSQPGQSFSIQYGTGS 90 (351)
T ss_dssp --CCTTGGGSSSCCCEEEEETTTTEEEEEEEETTCCCEEEEBTTCC-SGGGTTSCCBCGGGCTTCBCCSCEEEEESSSCE
T ss_pred ccceeceecCCCEEEEEEEECCCCeEEEEEEeCCCcceEEecCCCC-ccccCCCCcCCcccCcceEECCCEEEEEeCCCC
Confidence 4468999999999999999999999999999999999999999996 468999999999999999999999999999999
Q ss_pred eEEEEEEeEeEeeeeeeecceEEEEEecccccccccccceEEeccccccccCccCchhhhhhhcCCCCCCeEEEEecCCC
Q 011143 156 ISGFFSQDNVKVGDLVVKNQDFIEATKEASITFLAAKFDGILGLGFQEISIGKAIPVWYNMLDQGLVKEPVFSFWLNRDI 235 (492)
Q Consensus 156 v~G~~~~Dtv~lg~~~v~~~~Fg~a~~~~~~~~~~~~~dGILGLG~~~~s~~~~~~~~~~L~~qg~I~~~~FSl~L~~~~ 235 (492)
+.|.+++|+|++++.+++++.||++....+..+....++||||||++..+.....+++++|++||+|++++||+||++..
T Consensus 91 ~~G~~~~D~v~ig~~~~~~~~fg~~~~~~~~~~~~~~~~GilGLg~~~~s~~~~~~~~~~l~~qg~i~~~~FS~~L~~~~ 170 (351)
T 1tzs_A 91 LSGIIGADQVSVEGLTVVGQQFGESVTEPGQTFVDAEFDGILGLGYPSLAVGGVTPVFDNMMAQNLVDLPMFSVYMSSNP 170 (351)
T ss_dssp EEEEEEEEEEEETTEEEEEEEEEEECSCCCGGGGGCSCSEEEECSCGGGSGGGCCCHHHHHHHTTCCSSSEEEEECCCCC
T ss_pred eEEEEEEeEEEECCeEECCeEEEEEEeccccccccCCCceEEecCCccccccCCCcHHHHHHHCCCCCCCEEEEEEcCCC
Confidence 99999999999999999999999998776555666778999999999888777889999999999999999999998874
Q ss_pred CCCCCeeEEECccCCCCcccccEEEecccccceEEEeeeEEEcCeeeeecCCCceEEEcCCcccccccHHHHHHHHHHhC
Q 011143 236 EGEEGGEIVFGGVDPDHYKGEHTYVPVTKKGYWQFEMGDVLIDGETTGYCSTGCNAIADSGTSLLAGPTTIITQINHAIG 315 (492)
Q Consensus 236 ~~~~~G~L~fGgiD~~~y~G~l~~~pv~~~~~w~v~l~~i~vgg~~~~~~~~~~~aiiDTGTt~i~lP~~~~~~l~~~i~ 315 (492)
.....|+|+|||+|+++|.|++.|+|+.+.+||.|.+++|.|+++.+. +..+..+||||||+++++|.+++++|.++++
T Consensus 171 ~~~~~G~l~fGg~d~~~~~g~l~~~p~~~~~~~~v~l~~i~v~~~~~~-~~~~~~aiiDSGTs~~~lP~~~~~~l~~~~~ 249 (351)
T 1tzs_A 171 EGGAGSELIFGGYDHSHFSGSLNWVPVTKQAYWQIALDNIQVGGTVMF-CSEGCQAIVDTGTSLITGPSDKIKQLQNAIG 249 (351)
T ss_dssp --CTTCEEEETSCCGGGBCSCCEEEECSEETTEEEEEEEEEETTEEEE-CTTCEEEEECTTCSSEEECHHHHHHHHHHHT
T ss_pred CCCCCCEEEECCCCHHHcCCceEEEecCCCceEEEEeCEEEECCceEE-cCCCceEEeccCCcceeCCHHHHHHHHHHhC
Confidence 433479999999999999999999999999999999999999998753 4567899999999999999999999999998
Q ss_pred CCcceecccccccccchhhHHHHHHhhcCcccccccccccccCCCcCcccccceeeccCCCCCCCCCCCCccchhhHHHH
Q 011143 316 ASGVISQECKTLVDQYGKTILEMLIAETQPQKICSQMGLCTFDGTRGFSMGIESVIDKSSDKSSDGVHDSAMCSACEMAV 395 (492)
Q Consensus 316 a~~~~~~~C~~~~~~fg~~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 395 (492)
+..
T Consensus 250 ~~~----------------------------------------------------------------------------- 252 (351)
T 1tzs_A 250 AAP----------------------------------------------------------------------------- 252 (351)
T ss_dssp CEE-----------------------------------------------------------------------------
T ss_pred Ccc-----------------------------------------------------------------------------
Confidence 761
Q ss_pred HHHHHHhhhcccHHHHHHHHHhhcCCCCCCcccccccccccCCCCcEEEEECCEEEeeCccceEEEecC
Q 011143 396 IWMQNKLRRNETADQILNYVNQLCDRLPSPNGESAVDCDNLSSMPNVSFTIGGKVFDLAPNEVWLYADF 464 (492)
Q Consensus 396 ~~~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~c~~~~~~p~i~~~~~g~~~~l~~~~y~~~~~~ 464 (492)
.. +.|.++|+.+.++|+|+|.|+|++++|+|++|+++...
T Consensus 253 ----------------------------~~-g~~~~~C~~~~~~P~i~f~f~g~~~~i~~~~yi~~~~~ 292 (351)
T 1tzs_A 253 ----------------------------VD-GEYAVECANLNVMPDVTFTINGVPYTLSPTAYTLLDFV 292 (351)
T ss_dssp ----------------------------CS-SSEEECGGGGGGSCCEEEEETTEEEEECTTTSEECC--
T ss_pred ----------------------------cC-CeEEEeCCCCccCCcEEEEECCEEEEECHHHhEeeccC
Confidence 12 66888999988999999999999999999999998653
No 7
>1dpj_A Proteinase A; proteinase A, hydrolase-hydrolase inhibitor COM; HET: BMA MAN NAG; 1.80A {Saccharomyces cerevisiae} SCOP: b.50.1.2 PDB: 1dp5_A* 1fmu_A* 1fmx_A* 1fq5_A* 1fq4_A* 1fq6_A* 1fq7_A* 1fq8_A* 2jxr_A* 1g0v_A*
Probab=100.00 E-value=9e-53 Score=427.61 Aligned_cols=279 Identities=43% Similarity=0.819 Sum_probs=252.4
Q ss_pred ceEeccccCCceEEEEEEEcCCCceEEEEEeCCCCceeeeCCCCCCCcCCCCCCCCCCCCCCceeECCeeEEEEecCCee
Q 011143 77 DIVALNNFMDAQYFGEVSIGTPSQTFTVIFDTGSSNLWVPSAKCYFSVSCYFHSKYKSSHSSTYKRNGTSAAIQYGTGAI 156 (492)
Q Consensus 77 ~~~pl~n~~d~~Y~~~I~IGTP~Q~~~v~lDTGSs~~WV~s~~C~~~~~C~~~~~y~p~~SsT~~~~~~~~~~~Yg~Gsv 156 (492)
..+||.|+.+.+|+++|.||||||+++|++||||+++||++..|. ...|..++.|+|++|+||+..++.|.+.|++|++
T Consensus 3 ~~~~l~~~~~~~Y~~~i~iGtP~q~~~v~~DTGSs~lWv~~~~C~-~~~C~~~~~y~~~~SsT~~~~~~~~~i~Yg~Gs~ 81 (329)
T 1dpj_A 3 HDVPLTNYLNAQYYTDITLGTPPQNFKVILDTGSSNLWVPSNECG-SLACFLHSKYDHEASSSYKANGTEFAIQYGTGSL 81 (329)
T ss_dssp EEEECEEETTTEEEEEEEETTTTEEEEEEEETTCCCEEEEBTTCC-SHHHHTSCCBCGGGCTTCEEEEEEEEEEETTEEE
T ss_pred cceeeeecCCCEEEEEEEECCCCcEEEEEEeCCCcCeEEecCCCC-CcccCCcCcCCcccCcCeEECCcEEEEEECCceE
Confidence 468999999999999999999999999999999999999999996 3469888999999999999999999999999999
Q ss_pred EEEEEEeEeEeeeeeeecceEEEEEecccccccccccceEEeccccccccCccCchhhhhhhcCCCCCCeEEEEecCCCC
Q 011143 157 SGFFSQDNVKVGDLVVKNQDFIEATKEASITFLAAKFDGILGLGFQEISIGKAIPVWYNMLDQGLVKEPVFSFWLNRDIE 236 (492)
Q Consensus 157 ~G~~~~Dtv~lg~~~v~~~~Fg~a~~~~~~~~~~~~~dGILGLG~~~~s~~~~~~~~~~L~~qg~I~~~~FSl~L~~~~~ 236 (492)
.|.+++|+|++++.+++++.||++....+..+....++||||||++..+.....+++++|++||+|++++||+||.+...
T Consensus 82 ~G~~~~D~v~ig~~~~~~~~fg~~~~~~~~~f~~~~~~GilGLg~~~~s~~~~~~~~~~l~~qg~i~~~~Fs~~l~~~~~ 161 (329)
T 1dpj_A 82 EGYISQDTLSIGDLTIPKQDFAEATSEPGLTFAFGKFDGILGLGYDTISVDKVVPPFYNAIQQDLLDEKRFAFYLGDTSK 161 (329)
T ss_dssp EEEEEEEEEEETTEEEEEEEEEEEEECCHHHHTTCSCSEEEECSCGGGCGGGCCCHHHHHHHTTCCSSSEEEEEECCGGG
T ss_pred EEEEEEEEEEECCeEECCeEEEEEEecCccccccCCcceEEEeCCchhhccCCCCHHHHHHhcCCcCCCEEEEEecCCCC
Confidence 99999999999999999999999998765445556789999999998887777889999999999999999999987532
Q ss_pred -CCCCeeEEECccCCCCcccccEEEecccccceEEEeeeEEEcCeeeeecCCCceEEEcCCcccccccHHHHHHHHHHhC
Q 011143 237 -GEEGGEIVFGGVDPDHYKGEHTYVPVTKKGYWQFEMGDVLIDGETTGYCSTGCNAIADSGTSLLAGPTTIITQINHAIG 315 (492)
Q Consensus 237 -~~~~G~L~fGgiD~~~y~G~l~~~pv~~~~~w~v~l~~i~vgg~~~~~~~~~~~aiiDTGTt~i~lP~~~~~~l~~~i~ 315 (492)
....|+|+|||+|+++|+|++.|+|+.+.+||.|.+++|.|+++.+. ..+..++|||||+++++|++++++|.++++
T Consensus 162 ~~~~~G~l~fGg~d~~~~~g~l~~~p~~~~~~~~v~l~~i~v~~~~~~--~~~~~aiiDSGTt~~~lP~~~~~~l~~~~~ 239 (329)
T 1dpj_A 162 DTENGGEATFGGIDESKFKGDITWLPVRRKAYWEVKFEGIGLGDEYAE--LESHGAAIDTGTSLITLPSGLAEMINAEIG 239 (329)
T ss_dssp TCSSSEEEEESSCCGGGEEEEEEEEECSSBTTBEEEEEEEEETTEEEE--CSSCEEEECTTCSCEEECHHHHHHHHHHHT
T ss_pred CCCCCcEEEEcCCChhhcCCceEEEEcCCCceEEEEeeeEEECCeEec--CCCccEEeeCCCCcEECCHHHHHHHHHHhC
Confidence 22479999999999999999999999999999999999999998764 356789999999999999999999999998
Q ss_pred CCcceecccccccccchhhHHHHHHhhcCcccccccccccccCCCcCcccccceeeccCCCCCCCCCCCCccchhhHHHH
Q 011143 316 ASGVISQECKTLVDQYGKTILEMLIAETQPQKICSQMGLCTFDGTRGFSMGIESVIDKSSDKSSDGVHDSAMCSACEMAV 395 (492)
Q Consensus 316 a~~~~~~~C~~~~~~fg~~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 395 (492)
+..
T Consensus 240 ~~~----------------------------------------------------------------------------- 242 (329)
T 1dpj_A 240 AKK----------------------------------------------------------------------------- 242 (329)
T ss_dssp CEE-----------------------------------------------------------------------------
T ss_pred Ccc-----------------------------------------------------------------------------
Confidence 651
Q ss_pred HHHHHHhhhcccHHHHHHHHHhhcCCCCCCcccccccccccCCCCcEEEEECCEEEeeCccceEEEec
Q 011143 396 IWMQNKLRRNETADQILNYVNQLCDRLPSPNGESAVDCDNLSSMPNVSFTIGGKVFDLAPNEVWLYAD 463 (492)
Q Consensus 396 ~~~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~c~~~~~~p~i~~~~~g~~~~l~~~~y~~~~~ 463 (492)
...+.|.++|+...++|+|+|.|+|++++|+|++|+++..
T Consensus 243 ----------------------------~~~g~~~~~C~~~~~~P~i~f~f~g~~~~i~~~~y~~~~~ 282 (329)
T 1dpj_A 243 ----------------------------GWTGQYTLDCNTRDNLPDLIFNFNGYNFTIGPYDYTLEVS 282 (329)
T ss_dssp ----------------------------CTTSSEEECGGGGGGCCCEEEEETTEEEEECTTTSEEEET
T ss_pred ----------------------------CCCCeEEEECCCCCcCCcEEEEECCEEEEECHHHhEecCC
Confidence 1356788999998899999999999999999999999864
No 8
>3k1w_A Renin; protease, alternative splicing, aspartyl protease, cleavage on PAIR of basic residues, disease mutation, disulfide bond, glycoprotein; HET: BFX NDG HSQ; 1.50A {Homo sapiens} SCOP: b.50.1.2 PDB: 3d91_A* 3g70_A* 3g6z_A* 3own_A* 2iko_A* 1bbs_A* 1rne_A* 2bkt_A* 2bks_A* 2iku_A* 2il2_A* 2ren_A* 2v0z_C* 2v10_C* 2v11_C* 2v12_C* 2v13_A* 2v16_C* 3g72_A* 3oot_A* ...
Probab=100.00 E-value=7.8e-53 Score=429.78 Aligned_cols=283 Identities=43% Similarity=0.837 Sum_probs=254.8
Q ss_pred CcceEeccccCCceEEEEEEEcCCCceEEEEEeCCCCceeeeCCCCCC-CcCCCCCCCCCCCCCCceeECCeeEEEEecC
Q 011143 75 DTDIVALNNFMDAQYFGEVSIGTPSQTFTVIFDTGSSNLWVPSAKCYF-SVSCYFHSKYKSSHSSTYKRNGTSAAIQYGT 153 (492)
Q Consensus 75 ~~~~~pl~n~~d~~Y~~~I~IGTP~Q~~~v~lDTGSs~~WV~s~~C~~-~~~C~~~~~y~p~~SsT~~~~~~~~~~~Yg~ 153 (492)
+...+||.|+.|.+|+++|.||||||+++|++||||+++||++..|.. ...|..++.|+|++|+||+..++.|.+.|++
T Consensus 6 ~~~~~~l~n~~d~~Y~~~i~iGtP~q~~~v~~DTGSs~~Wv~~~~C~~~~~~C~~~~~y~~~~SsT~~~~~~~~~i~Yg~ 85 (341)
T 3k1w_A 6 TTSSVILTNYMDTQYYGEIGIGTPPQTFKVVFDTGSSNVWVPSSKCSRLYTACVYHKLFDASDSSSYKHNGTELTLRYST 85 (341)
T ss_dssp BCEEEEEEEETTTEEEEEEEETTTTEEEEEEEETTCCCEEEEBTTSCTTCHHHHTSCCBCGGGCTTCEEEEEEEEEEETT
T ss_pred CCccccceEccCCEEEEEEEEcCCCcEEEEEEeCCCcceEEccCCCCCCCCcccCCCCCCCCcCcCeeECCCEEEEEECC
Confidence 456899999999999999999999999999999999999999999952 3479889999999999999999999999999
Q ss_pred CeeEEEEEEeEeEeeeeeeecceEEEEEecccccccccccceEEeccccccccCccCchhhhhhhcCCCCCCeEEEEecC
Q 011143 154 GAISGFFSQDNVKVGDLVVKNQDFIEATKEASITFLAAKFDGILGLGFQEISIGKAIPVWYNMLDQGLVKEPVFSFWLNR 233 (492)
Q Consensus 154 Gsv~G~~~~Dtv~lg~~~v~~~~Fg~a~~~~~~~~~~~~~dGILGLG~~~~s~~~~~~~~~~L~~qg~I~~~~FSl~L~~ 233 (492)
|++.|.+++|+|++++.++ ++.||++.......+....++||||||++..+.....|++++|++||+|++++||+||++
T Consensus 86 gs~~G~~~~D~v~ig~~~v-~~~fg~~~~~~~~~~~~~~~~GilGLg~~~~s~~~~~~~~~~l~~qg~i~~~~Fs~~l~~ 164 (341)
T 3k1w_A 86 GTVSGFLSQDIITVGGITV-TQMFGEVTEMPALPFMLAEFDGVVGMGFIEQAIGRVTPIFDNIISQGVLKEDVFSFYYNR 164 (341)
T ss_dssp EEEEEEEEEEEEEETTEEE-EEEEEEEEECCHHHHTTCSSSEEEECSCGGGCGGGCCCHHHHHHHHTCBSSSEEEEEECC
T ss_pred cEEEEEEEEEEEEECCcee-eEEEEEEEEccccccccCCcceEEECCchhhcccCCCCHHHHHHHCCCCCCCEEEEEEeC
Confidence 9999999999999999999 999999998765446667789999999998887778899999999999999999999998
Q ss_pred CC--CCCCCeeEEECccCCCCcccccEEEecccccceEEEeeeEEEcCeeeeecCCCceEEEcCCcccccccHHHHHHHH
Q 011143 234 DI--EGEEGGEIVFGGVDPDHYKGEHTYVPVTKKGYWQFEMGDVLIDGETTGYCSTGCNAIADSGTSLLAGPTTIITQIN 311 (492)
Q Consensus 234 ~~--~~~~~G~L~fGgiD~~~y~G~l~~~pv~~~~~w~v~l~~i~vgg~~~~~~~~~~~aiiDTGTt~i~lP~~~~~~l~ 311 (492)
.. +....|+|+|||+|+++|.|+++|+|+.+.++|.|.+++|.|+++.+. +.....++|||||+++++|++++++|+
T Consensus 165 ~~~~~~~~~G~l~fGg~d~~~~~g~l~~~p~~~~~~w~v~l~~i~v~~~~~~-~~~~~~~iiDsGtt~~~lP~~~~~~i~ 243 (341)
T 3k1w_A 165 DSENSQSLGGQIVLGGSDPQHYEGNFHYINLIKTGVWQIQMKGVSVGSSTLL-CEDGCLALVDTGASYISGSTSSIEKLM 243 (341)
T ss_dssp CC-----CCEEEEESSCCGGGEEEEEEEEECSSTTSCEEEECCEEETTEEEE-CTTCEEEEECTTCSSEEECHHHHHHHH
T ss_pred CCCcCCCCCCEEEECccChHHccCceEEEecCCCCEEEEEEeEEEECCEEee-cCCCCEEEEECCCChhcCCHHHHHHHH
Confidence 64 223479999999999999999999999999999999999999998753 456789999999999999999999999
Q ss_pred HHhCCCcceecccccccccchhhHHHHHHhhcCcccccccccccccCCCcCcccccceeeccCCCCCCCCCCCCccchhh
Q 011143 312 HAIGASGVISQECKTLVDQYGKTILEMLIAETQPQKICSQMGLCTFDGTRGFSMGIESVIDKSSDKSSDGVHDSAMCSAC 391 (492)
Q Consensus 312 ~~i~a~~~~~~~C~~~~~~fg~~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 391 (492)
+++++..
T Consensus 244 ~~~~~~~------------------------------------------------------------------------- 250 (341)
T 3k1w_A 244 EALGAKK------------------------------------------------------------------------- 250 (341)
T ss_dssp HHHTCEE-------------------------------------------------------------------------
T ss_pred HHcCCee-------------------------------------------------------------------------
Confidence 9998761
Q ss_pred HHHHHHHHHHhhhcccHHHHHHHHHhhcCCCCCCcccccccccccCCCCcEEEEECCEEEeeCccceEEEecCC
Q 011143 392 EMAVIWMQNKLRRNETADQILNYVNQLCDRLPSPNGESAVDCDNLSSMPNVSFTIGGKVFDLAPNEVWLYADFE 465 (492)
Q Consensus 392 ~~~~~~~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~c~~~~~~p~i~~~~~g~~~~l~~~~y~~~~~~~ 465 (492)
...| |.++|+...++|+|+|.|+|++++|+|++|+++....
T Consensus 251 --------------------------------~~~g-~~~~C~~~~~~p~i~f~f~g~~~~l~~~~~~~~~~~~ 291 (341)
T 3k1w_A 251 --------------------------------RLFD-YVVKCNEGPTLPDISFHLGGKEYTLTSADYVFQESYS 291 (341)
T ss_dssp --------------------------------CSSC-EEEEGGGGGGCCCEEEEETTEEEEECHHHHBCCSCCC
T ss_pred --------------------------------cCCC-eEEeCCCCCcCCcEEEEECCEEEEECHHHheeEccCC
Confidence 1235 8999999889999999999999999999999986543
No 9
>1am5_A Pepsin, acid proteinase; aspartyl protease, hydrolase; 2.16A {Gadus morhua} SCOP: b.50.1.2
Probab=100.00 E-value=2.2e-52 Score=423.87 Aligned_cols=274 Identities=41% Similarity=0.735 Sum_probs=250.0
Q ss_pred eEeccccCCceEEEEEEEcCCCceEEEEEeCCCCceeeeCCCCCCCcCCCCCCCCCCCCCCceeECCeeEEEEecCCeeE
Q 011143 78 IVALNNFMDAQYFGEVSIGTPSQTFTVIFDTGSSNLWVPSAKCYFSVSCYFHSKYKSSHSSTYKRNGTSAAIQYGTGAIS 157 (492)
Q Consensus 78 ~~pl~n~~d~~Y~~~I~IGTP~Q~~~v~lDTGSs~~WV~s~~C~~~~~C~~~~~y~p~~SsT~~~~~~~~~~~Yg~Gsv~ 157 (492)
.+||.|+.+.+|+++|.||||||+++|++||||+++||++..|. ...|..++.|+|++|+||+..++.|.+.|++|++.
T Consensus 3 ~~~l~n~~~~~Y~~~i~iGtP~q~~~v~~DTGSs~~Wv~~~~C~-~~~C~~~~~y~~~~SsT~~~~~~~~~i~Yg~Gs~~ 81 (324)
T 1am5_A 3 TEQMKNEADTEYYGVISIGTPPESFKVIFDTGSSNLWVSSSHCS-AQACSNHNKFKPRQSSTYVETGKTVDLTYGTGGMR 81 (324)
T ss_dssp EEEEEEETTTEEEEEEEETTTTEEEEEEEETTCCCEEECBTTCC-SHHHHTSCCBCGGGCTTCEEEEEEEEEECSSCEEE
T ss_pred eeeeecCCCCEEEEEEEECCCCeEEEEEEeCCCcceEEecCCCC-cccccCCCcCCCccCCCeEeCCcEEEEEECCCCeE
Confidence 58999999999999999999999999999999999999999996 45798899999999999999999999999999999
Q ss_pred EEEEEeEeEeeeeeeecceEEEEEecccccccccccceEEeccccccccCccCchhhhhhhcCCCCCCeEEEEecCCCCC
Q 011143 158 GFFSQDNVKVGDLVVKNQDFIEATKEASITFLAAKFDGILGLGFQEISIGKAIPVWYNMLDQGLVKEPVFSFWLNRDIEG 237 (492)
Q Consensus 158 G~~~~Dtv~lg~~~v~~~~Fg~a~~~~~~~~~~~~~dGILGLG~~~~s~~~~~~~~~~L~~qg~I~~~~FSl~L~~~~~~ 237 (492)
|.+++|+|++++.+++++.||++....+..+....++||||||++..+.....|++++|++||+|++++||+||++...
T Consensus 82 G~~~~D~v~~g~~~~~~~~fg~~~~~~~~~~~~~~~~GilGLg~~~~s~~~~~~~~~~l~~qg~i~~~~FS~~l~~~~~- 160 (324)
T 1am5_A 82 GILGQDTVSVGGGSDPNQELGESQTEPGPFQAAAPFDGILGLAYPSIAAAGAVPVFDNMGSQSLVEKDLFSFYLSGGGA- 160 (324)
T ss_dssp EEEEEEEEESSSSCEEEEEEEEEEECCSTTTTTCSSSEEEECSCGGGCGGGCCCHHHHHHHTTCSSSSEEEEECCSTTC-
T ss_pred EEEEECceeECCcEEcccEEEEEEecccccccCCCCceEEecCCccccccCCCchHHhHHhcCCCCCCEEEEEecCCCC-
Confidence 9999999999999999999999998765445566789999999998887778889999999999999999999988632
Q ss_pred CCCeeEEECccCCCCcccccEEEecccccceEEEeeeEEEcCeeeeecCCCceEEEcCCcccccccHHHHHHHHHHhCCC
Q 011143 238 EEGGEIVFGGVDPDHYKGEHTYVPVTKKGYWQFEMGDVLIDGETTGYCSTGCNAIADSGTSLLAGPTTIITQINHAIGAS 317 (492)
Q Consensus 238 ~~~G~L~fGgiD~~~y~G~l~~~pv~~~~~w~v~l~~i~vgg~~~~~~~~~~~aiiDTGTt~i~lP~~~~~~l~~~i~a~ 317 (492)
..|+|+|||+|+++|.|++.|+|+.+.++|.|.+++|+|+++.+. +.+ ..++|||||+++++|++++++|.+++++.
T Consensus 161 -~~G~l~fGg~d~~~~~g~l~~~p~~~~~~~~v~l~~i~v~~~~~~-~~~-~~aiiDSGTt~~~lp~~~~~~l~~~~~~~ 237 (324)
T 1am5_A 161 -NGSEVMLGGVDNSHYTGSIHWIPVTAEKYWQVALDGITVNGQTAA-CEG-CQAIVDTGTSKIVAPVSALANIMKDIGAS 237 (324)
T ss_dssp -SCEEEEESSCCGGGBCSCCEEEEEEEETTEEEEECEEEETTEECC-CCC-EEEEECTTCSSEEECTTTHHHHHHHHTCE
T ss_pred -CCcEEEECccCHHHcCCceEEEecCCCcEEEEEEeEEEECCceee-ccC-ceEEEecCCccEECCHHHHHHHHHHhCCc
Confidence 389999999999999999999999989999999999999998753 333 88999999999999999999999999764
Q ss_pred cceecccccccccchhhHHHHHHhhcCcccccccccccccCCCcCcccccceeeccCCCCCCCCCCCCccchhhHHHHHH
Q 011143 318 GVISQECKTLVDQYGKTILEMLIAETQPQKICSQMGLCTFDGTRGFSMGIESVIDKSSDKSSDGVHDSAMCSACEMAVIW 397 (492)
Q Consensus 318 ~~~~~~C~~~~~~fg~~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 397 (492)
.
T Consensus 238 -~------------------------------------------------------------------------------ 238 (324)
T 1am5_A 238 -E------------------------------------------------------------------------------ 238 (324)
T ss_dssp -E------------------------------------------------------------------------------
T ss_pred -c------------------------------------------------------------------------------
Confidence 1
Q ss_pred HHHHhhhcccHHHHHHHHHhhcCCCCCCcccccccccccCCCCcEEEEECCEEEeeCccceEEEe
Q 011143 398 MQNKLRRNETADQILNYVNQLCDRLPSPNGESAVDCDNLSSMPNVSFTIGGKVFDLAPNEVWLYA 462 (492)
Q Consensus 398 ~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~c~~~~~~p~i~~~~~g~~~~l~~~~y~~~~ 462 (492)
..|.|.++|+...++|+|+|.|+|++++|+|++|+++.
T Consensus 239 ---------------------------~~g~~~~~C~~~~~~P~i~f~f~g~~~~i~~~~y~~~~ 276 (324)
T 1am5_A 239 ---------------------------NQGEMMGNCASVQSLPDITFTINGVKQPLPPSAYIEGD 276 (324)
T ss_dssp ---------------------------CCCCEECCTTSSSSSCCEEEEETTEEEEECHHHHEEES
T ss_pred ---------------------------cCCcEEEeCCCcccCCcEEEEECCEEEEECHHHhcccC
Confidence 13567889999889999999999999999999999986
No 10
>1htr_B Gastricsin; aspartyl protease; 1.62A {Homo sapiens} SCOP: b.50.1.2 PDB: 1avf_A
Probab=100.00 E-value=1.8e-52 Score=425.43 Aligned_cols=278 Identities=42% Similarity=0.821 Sum_probs=252.0
Q ss_pred eEeccccCCceEEEEEEEcCCCceEEEEEeCCCCceeeeCCCCCCCcCCCCCCCCCCCCCCceeECCeeEEEEecCCeeE
Q 011143 78 IVALNNFMDAQYFGEVSIGTPSQTFTVIFDTGSSNLWVPSAKCYFSVSCYFHSKYKSSHSSTYKRNGTSAAIQYGTGAIS 157 (492)
Q Consensus 78 ~~pl~n~~d~~Y~~~I~IGTP~Q~~~v~lDTGSs~~WV~s~~C~~~~~C~~~~~y~p~~SsT~~~~~~~~~~~Yg~Gsv~ 157 (492)
.+||. +.+.+|+++|.||||||+++|++||||+++||++..|. ...|..++.|+|++|+||+..++.|.+.|++|++.
T Consensus 4 ~~~l~-~~~~~Y~~~i~iGtP~q~~~v~~DTGSs~lWv~~~~C~-~~~C~~~~~y~~~~SsT~~~~~~~~~i~Yg~gs~~ 81 (329)
T 1htr_B 4 YEPMA-YMDAAYFGEISIGTPPQNFLVLFDTGSSNLWVPSVYCQ-SQACTSHSRFNPSESSTYSTNGQTFSLQYGSGSLT 81 (329)
T ss_dssp CCGGG-GTTCCEEEEEEETTTTEEEEEEEETTCCCEEEEBTTCC-SHHHHTSCCBCGGGCTTCEEEEEEEEEEETTEEEE
T ss_pred eeeeE-EcCCEEEEEEEECCCCcEEEEEEcCCCccEEEecCCCC-CcccCCCCcCCCccCCCeEECCcEEEEEeCCCCeE
Confidence 47888 88999999999999999999999999999999999995 45798899999999999999999999999999999
Q ss_pred EEEEEeEeEeeeeeeecceEEEEEecccccccccccceEEeccccccccCccCchhhhhhhcCCCCCCeEEEEecCCCCC
Q 011143 158 GFFSQDNVKVGDLVVKNQDFIEATKEASITFLAAKFDGILGLGFQEISIGKAIPVWYNMLDQGLVKEPVFSFWLNRDIEG 237 (492)
Q Consensus 158 G~~~~Dtv~lg~~~v~~~~Fg~a~~~~~~~~~~~~~dGILGLG~~~~s~~~~~~~~~~L~~qg~I~~~~FSl~L~~~~~~ 237 (492)
|.+++|+|++++.+++++.||++....+..+....++||||||++..+.....|++++|++||+|++++||+||++....
T Consensus 82 G~~~~D~v~~g~~~~~~~~fg~~~~~~~~~~~~~~~~GilGLg~~~~s~~~~~~~~~~l~~qg~i~~~~Fs~~L~~~~~~ 161 (329)
T 1htr_B 82 GFFGYDTLTVQSIQVPNQEFGLSENEPGTNFVYAQFDGIMGLAYPALSVDEATTAMQGMVQEGALTSPVFSVYLSNQQGS 161 (329)
T ss_dssp EEEEEEEEEETTEEEEEEEEEEESSCSSGGGGGCSCCEEEECCCCSCCCTTCCSHHHHHHHTTCSSSSEEEEEECSSCSS
T ss_pred EEEEeeeEEEcceEECceEEEEEEEccccccccCCCceEEecCCCcccccCCCCHHHHHHhcCCCCCCEEEEEEcCCCCC
Confidence 99999999999999999999999877655555667899999999988877788999999999999999999999886422
Q ss_pred CCCeeEEECccCCCCcccccEEEecccccceEEEeeeEEEcCeeeeecCCCceEEEcCCcccccccHHHHHHHHHHhCCC
Q 011143 238 EEGGEIVFGGVDPDHYKGEHTYVPVTKKGYWQFEMGDVLIDGETTGYCSTGCNAIADSGTSLLAGPTTIITQINHAIGAS 317 (492)
Q Consensus 238 ~~~G~L~fGgiD~~~y~G~l~~~pv~~~~~w~v~l~~i~vgg~~~~~~~~~~~aiiDTGTt~i~lP~~~~~~l~~~i~a~ 317 (492)
..|+|+|||+|+++|.|++.|+|+.+.+||.|.+++|+|+++.+..+.....++|||||+++++|++++++|.+++++.
T Consensus 162 -~~G~l~fGg~d~~~~~g~l~~~p~~~~~~~~v~l~~i~v~~~~~~~~~~~~~aiiDSGTt~~~lp~~~~~~l~~~~~~~ 240 (329)
T 1htr_B 162 -SGGAVVFGGVDSSLYTGQIYWAPVTQELYWQIGIEEFLIGGQASGWCSEGCQAIVDTGTSLLTVPQQYMSALLQATGAQ 240 (329)
T ss_dssp -EEEEEEESSCCGGGEEEEEEEEEBCSSSSCEEEECEEEETTEECCTTTTCEEEEECTTCCSEEEEGGGHHHHHHHHTCE
T ss_pred -CCcEEEEcccCHHHcCCceEEEECCCCceEEEEEeEEEECCceeeecCCCceEEEecCCccEECCHHHHHHHHHHhCCe
Confidence 3799999999999999999999999999999999999999987643456789999999999999999999999999876
Q ss_pred cceecccccccccchhhHHHHHHhhcCcccccccccccccCCCcCcccccceeeccCCCCCCCCCCCCccchhhHHHHHH
Q 011143 318 GVISQECKTLVDQYGKTILEMLIAETQPQKICSQMGLCTFDGTRGFSMGIESVIDKSSDKSSDGVHDSAMCSACEMAVIW 397 (492)
Q Consensus 318 ~~~~~~C~~~~~~fg~~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 397 (492)
.
T Consensus 241 ~------------------------------------------------------------------------------- 241 (329)
T 1htr_B 241 E------------------------------------------------------------------------------- 241 (329)
T ss_dssp E-------------------------------------------------------------------------------
T ss_pred e-------------------------------------------------------------------------------
Confidence 1
Q ss_pred HHHHhhhcccHHHHHHHHHhhcCCCCCCcccccccccccCCCCcEEEEECCEEEeeCccceEEEec
Q 011143 398 MQNKLRRNETADQILNYVNQLCDRLPSPNGESAVDCDNLSSMPNVSFTIGGKVFDLAPNEVWLYAD 463 (492)
Q Consensus 398 ~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~c~~~~~~p~i~~~~~g~~~~l~~~~y~~~~~ 463 (492)
...+.|.++|+.+.++|+|+|.|+|++++|+|++|+++..
T Consensus 242 --------------------------~~~g~~~~~C~~~~~~P~i~f~f~g~~~~i~~~~y~~~~~ 281 (329)
T 1htr_B 242 --------------------------DEYGQFLVNCNSIQNLPSLTFIINGVEFPLPPSSYILSNN 281 (329)
T ss_dssp --------------------------CTTSCEEECGGGGGGSCCEEEEETTEEEEECHHHHEEECS
T ss_pred --------------------------cCCCeEEEeCCCcccCCcEEEEECCEEEEECHHHhcccCC
Confidence 1245688999998899999999999999999999999865
No 11
>1miq_A Plasmepsin; aspartic proteinase zymogen, domain opening, hydrolase; 2.50A {Plasmodium vivax} SCOP: b.50.1.2 PDB: 1ls5_A*
Probab=100.00 E-value=3.1e-52 Score=431.17 Aligned_cols=274 Identities=33% Similarity=0.645 Sum_probs=249.1
Q ss_pred CcceEeccccCCceEEEEEEEcCCCceEEEEEeCCCCceeeeCCCCCCCcCCCCCCCCCCCCCCceeECCeeEEEEecCC
Q 011143 75 DTDIVALNNFMDAQYFGEVSIGTPSQTFTVIFDTGSSNLWVPSAKCYFSVSCYFHSKYKSSHSSTYKRNGTSAAIQYGTG 154 (492)
Q Consensus 75 ~~~~~pl~n~~d~~Y~~~I~IGTP~Q~~~v~lDTGSs~~WV~s~~C~~~~~C~~~~~y~p~~SsT~~~~~~~~~~~Yg~G 154 (492)
....+||.|+.+.+|+++|.||||||++.|++||||+++||++..|. ...|..++.|+|++|+||+..++.|.+.|++|
T Consensus 50 ~~~~~pl~~~~~~~Y~~~i~iGTP~Q~~~v~~DTGSs~lWv~~~~C~-~~~C~~~~~y~~~~SsT~~~~~~~~~i~Yg~G 128 (375)
T 1miq_A 50 ENDVIELDDVANIMFYGEGEVGDNHQKFMLIFDTGSANLWVPSKKCN-SSGCSIKNLYDSSKSKSYEKDGTKVDITYGSG 128 (375)
T ss_dssp TTBCCCGGGTBCEEEECCCEETTTTEECCEEEETTCCCEEEEBTTCC-SSGGGGSCCBCGGGCTTCEEEEEEEEEEETTE
T ss_pred CcceEEcccCCCCEEEEEEEECCCCeEEEEEEeCCCcceEEccCCCC-cccccCCCcCCCccCCceEECCcEEEEEeCCC
Confidence 34568999999999999999999999999999999999999999996 56899999999999999999999999999999
Q ss_pred eeEEEEEEeEeEeeeeeeecceEEEEEe----cccccccccccceEEeccccccccCccCchhhhhhhcCCCCCCeEEEE
Q 011143 155 AISGFFSQDNVKVGDLVVKNQDFIEATK----EASITFLAAKFDGILGLGFQEISIGKAIPVWYNMLDQGLVKEPVFSFW 230 (492)
Q Consensus 155 sv~G~~~~Dtv~lg~~~v~~~~Fg~a~~----~~~~~~~~~~~dGILGLG~~~~s~~~~~~~~~~L~~qg~I~~~~FSl~ 230 (492)
++.|.+++|+|++++.++++ .||++.. .. .|....++||||||++..+.....|++++|++||+|++++||+|
T Consensus 129 s~~G~~~~Dtv~ig~~~v~~-~Fg~~~~~~~~~~--~f~~~~~dGilGLg~~~~s~~~~~~~~~~l~~qg~i~~~~FS~~ 205 (375)
T 1miq_A 129 TVKGFFSKDLVTLGHLSMPY-KFIEVTDTDDLEP--IYSSVEFDGILGLGWKDLSIGSIDPIVVELKNQNKIDNALFTFY 205 (375)
T ss_dssp EEEEEEEEEEEEETTEEEEE-EEEEEEECGGGTT--HHHHSCCCEEEECSSCCTTCSSCCCHHHHHHHTTSSSSSEEEEE
T ss_pred eEEEEEEEEEEEEcCceECc-EEEEEEecccccc--ccccCCCceEEeCCCCcccccCCCCHHHHHHhccCcCCCEEEEE
Confidence 99999999999999999999 9999997 43 35456789999999999888778899999999999999999999
Q ss_pred ecCCCCCCCCeeEEECccCCCCcccccEEEecccccceEEEeeeEEEcCeeeeecCCCceEEEcCCcccccccHHHHHHH
Q 011143 231 LNRDIEGEEGGEIVFGGVDPDHYKGEHTYVPVTKKGYWQFEMGDVLIDGETTGYCSTGCNAIADSGTSLLAGPTTIITQI 310 (492)
Q Consensus 231 L~~~~~~~~~G~L~fGgiD~~~y~G~l~~~pv~~~~~w~v~l~~i~vgg~~~~~~~~~~~aiiDTGTt~i~lP~~~~~~l 310 (492)
|++... ..|+|+|||+|+++|.|++.|+|+.+.+||.|.++ |.||++.+ .+..+||||||+++++|.+++++|
T Consensus 206 L~~~~~--~~G~l~fGg~d~~~~~g~l~~~p~~~~~~w~v~l~-i~v~g~~~----~~~~aiiDSGTs~~~lP~~~~~~l 278 (375)
T 1miq_A 206 LPVHDV--HAGYLTIGGIEEKFYEGNITYEKLNHDLYWQIDLD-VHFGKQTM----EKANVIVDSGTTTITAPSEFLNKF 278 (375)
T ss_dssp CCTTCT--TEEEEEESSCCGGGEEEEEEEEEBSSSSSSEEEEE-EEETTEEE----EEEEEEECTTBSSEEECHHHHHHH
T ss_pred ecCCCC--CCeEEEEcccCHHHcCCceEEEecCCCceEEEEEE-EEECCEEc----ccceEEecCCCccEEcCHHHHHHH
Confidence 988632 48999999999999999999999999999999999 99999876 467899999999999999999999
Q ss_pred HHHhCCCcceecccccccccchhhHHHHHHhhcCcccccccccccccCCCcCcccccceeeccCCCCCCCCCCCCccchh
Q 011143 311 NHAIGASGVISQECKTLVDQYGKTILEMLIAETQPQKICSQMGLCTFDGTRGFSMGIESVIDKSSDKSSDGVHDSAMCSA 390 (492)
Q Consensus 311 ~~~i~a~~~~~~~C~~~~~~fg~~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 390 (492)
.+++++..
T Consensus 279 ~~~~~~~~------------------------------------------------------------------------ 286 (375)
T 1miq_A 279 FANLNVIK------------------------------------------------------------------------ 286 (375)
T ss_dssp HHHHTCEE------------------------------------------------------------------------
T ss_pred HHHhCCcc------------------------------------------------------------------------
Confidence 99998750
Q ss_pred hHHHHHHHHHHhhhcccHHHHHHHHHhhcCCCCCCcccccccccccCCCCcEEEEECCEEEeeCccceEEEecC
Q 011143 391 CEMAVIWMQNKLRRNETADQILNYVNQLCDRLPSPNGESAVDCDNLSSMPNVSFTIGGKVFDLAPNEVWLYADF 464 (492)
Q Consensus 391 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~c~~~~~~p~i~~~~~g~~~~l~~~~y~~~~~~ 464 (492)
+...|.|.++|+. ..+|+|+|.|+|++++|+|++|+++...
T Consensus 287 --------------------------------~~~~g~~~~~C~~-~~~P~i~f~f~g~~~~l~~~~yi~~~~~ 327 (375)
T 1miq_A 287 --------------------------------VPFLPFYVTTCDN-KEMPTLEFKSANNTYTLEPEYYMNPILE 327 (375)
T ss_dssp --------------------------------CTTSSCEEEETTC-TTCCCEEEECSSCEEEECGGGSEEESSS
T ss_pred --------------------------------cCCCCeEEEECCC-CCCCcEEEEECCEEEEECHHHhEeeccC
Confidence 1235678899998 7899999999999999999999998753
No 12
>3qvc_A Histo-aspartic protease; HAP, plasmepsin, zymogen, hydrolase; 2.10A {Plasmodium falciparum} PDB: 3qvi_A* 3fns_A 3fnt_A* 3fnu_A*
Probab=100.00 E-value=7.4e-52 Score=436.95 Aligned_cols=274 Identities=30% Similarity=0.540 Sum_probs=249.2
Q ss_pred CcceEeccccCCceEEEEEEEcCCCceEEEEEeCCCCceeeeCCCCCCCcCCCCCCCCCCCCCCceeECCeeEEEEecCC
Q 011143 75 DTDIVALNNFMDAQYFGEVSIGTPSQTFTVIFDTGSSNLWVPSAKCYFSVSCYFHSKYKSSHSSTYKRNGTSAAIQYGTG 154 (492)
Q Consensus 75 ~~~~~pl~n~~d~~Y~~~I~IGTP~Q~~~v~lDTGSs~~WV~s~~C~~~~~C~~~~~y~p~~SsT~~~~~~~~~~~Yg~G 154 (492)
....+||.|+.|.+|+++|+||||||++.|++||||+++||++..|. +..|..++.|+|++|+||+..++.|.+.|++|
T Consensus 125 ~~~~~pL~n~~d~~Y~~~I~IGTPpQ~~~vi~DTGSs~lWV~s~~C~-s~~C~~~~~ydps~SsT~~~~~~~f~i~YgdG 203 (451)
T 3qvc_A 125 EFDNVELKDLANVLSFGEAKLGDNGQKFNFLFHTASSNVWVPSIKCT-SESCESKNHYDSSKSKTYEKDDTPVKLTSKAG 203 (451)
T ss_dssp --CCCCGGGGBCEEEEEEEEETTTTEEEEEEEESSBCSEEEEBTTCC-SGGGTTSCCBCGGGCTTCEEEEEEEEEECSSE
T ss_pred cCCccceeecCCCEEEEEEEECCCCcEEEEEEcCCCccEEEecCCCC-ccccCCCCCCCCCCCcccccCCCEEEEEECCC
Confidence 45679999999999999999999999999999999999999999996 56899999999999999999999999999999
Q ss_pred eeEEEEEEeEeEeeeeeeecceEEEEEe----cccccccccccceEEeccccccccCccCchhhhhhhcCCCCCCeEEEE
Q 011143 155 AISGFFSQDNVKVGDLVVKNQDFIEATK----EASITFLAAKFDGILGLGFQEISIGKAIPVWYNMLDQGLVKEPVFSFW 230 (492)
Q Consensus 155 sv~G~~~~Dtv~lg~~~v~~~~Fg~a~~----~~~~~~~~~~~dGILGLG~~~~s~~~~~~~~~~L~~qg~I~~~~FSl~ 230 (492)
++.|.++.|+|++|+.+++ +.||++.. ..+ +....++||||||++..+.....|++++|++||+|++++||+|
T Consensus 204 s~~G~~~~Dtv~igg~~v~-~~Fg~a~~t~~~~~~--f~~~~~dGILGLg~~~~s~~~~~~~~~~L~~qg~I~~~~FS~~ 280 (451)
T 3qvc_A 204 TISGIFSKDLVTIGKLSVP-YKFIEMTEIVGFEPF--YSESDVDGVFGLGWKDLSIGSIDPYIVELKTQNKIEQAVYSIY 280 (451)
T ss_dssp EEEEEEEEEEEEETTEEEE-EEEEEEEEEEECTTH--HHHSCCCEEEECSSBCSSSSCCCCHHHHHHHTTSSSSSEEEEE
T ss_pred EEEEEEEEEEEEECCEEEE-EEEEEEEeccccCCC--ccCCCCCEEEecCCCcccccCCCCHHHHHHHcCCCCCCEEEEE
Confidence 9999999999999999999 99999987 554 5556789999999999887778899999999999999999999
Q ss_pred ecCCCCCCCCeeEEECccCCCCcccccEEEecccccceEEEeeeEEEcCeeeeecCCCceEEEcCCcccccccHHHHHHH
Q 011143 231 LNRDIEGEEGGEIVFGGVDPDHYKGEHTYVPVTKKGYWQFEMGDVLIDGETTGYCSTGCNAIADSGTSLLAGPTTIITQI 310 (492)
Q Consensus 231 L~~~~~~~~~G~L~fGgiD~~~y~G~l~~~pv~~~~~w~v~l~~i~vgg~~~~~~~~~~~aiiDTGTt~i~lP~~~~~~l 310 (492)
|++.. ..+|+|+|||+|+++|.|++.|+|+.+.+||.|.++ |.||++ +.....++|||||+++++|++++++|
T Consensus 281 L~~~~--~~~G~l~fGgiD~s~y~G~l~~~pv~~~~~w~v~l~-I~Vgg~----~~~~~~aiiDSGTt~i~lP~~~~~~i 353 (451)
T 3qvc_A 281 LPPEN--KNKGYLTIGGIEERFFDGPLNYEKLNHDLMWQVDLD-VHFGNV----SSKKANVILDSATSVITVPTEFFNQF 353 (451)
T ss_dssp CCTTC--TTEEEEEESSCCGGGEEEEEEEEECSSTTSSEEEEE-EEETTE----EEEEEEEEECTTBSSEEECHHHHHHH
T ss_pred EcCCC--CCCCEEEECCcchhhcCCceEEEEcccCCeeEEEEE-EEECCc----cCCCceEEEeCCCccccCCHHHHHHH
Confidence 99873 237999999999999999999999999999999999 999998 23567899999999999999999999
Q ss_pred HHHhCCCcceecccccccccchhhHHHHHHhhcCcccccccccccccCCCcCcccccceeeccCCCCCCCCCCCCccchh
Q 011143 311 NHAIGASGVISQECKTLVDQYGKTILEMLIAETQPQKICSQMGLCTFDGTRGFSMGIESVIDKSSDKSSDGVHDSAMCSA 390 (492)
Q Consensus 311 ~~~i~a~~~~~~~C~~~~~~fg~~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 390 (492)
.+++++..
T Consensus 354 ~~~i~a~~------------------------------------------------------------------------ 361 (451)
T 3qvc_A 354 VESASVFK------------------------------------------------------------------------ 361 (451)
T ss_dssp HTTTTCEE------------------------------------------------------------------------
T ss_pred HHHcCCee------------------------------------------------------------------------
Confidence 99998761
Q ss_pred hHHHHHHHHHHhhhcccHHHHHHHHHhhcCCCCCCcccccccccccCCCCcEEEEECCEEEeeCccceEEEecC
Q 011143 391 CEMAVIWMQNKLRRNETADQILNYVNQLCDRLPSPNGESAVDCDNLSSMPNVSFTIGGKVFDLAPNEVWLYADF 464 (492)
Q Consensus 391 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~c~~~~~~p~i~~~~~g~~~~l~~~~y~~~~~~ 464 (492)
....|.|.++|+ +.++|+|+|.|+|.+++|+|++|+++...
T Consensus 362 --------------------------------~~~~g~y~v~C~-~~~~P~itf~fgg~~i~lp~~~yi~~~~~ 402 (451)
T 3qvc_A 362 --------------------------------VPFLSLYVTTCG-NTKLPTLEYRSPNKVYTLEPKQYLEPLEN 402 (451)
T ss_dssp --------------------------------CTTSSCEEEETT-CTTCCCEEEEETTEEEEECHHHHEEECTT
T ss_pred --------------------------------cCCCCeEEeeCC-cCcCCcEEEEECCEEEEEcHHHheeeccc
Confidence 112577899999 78999999999999999999999998764
No 13
>2bju_A Plasmepsin II; aspartic proteinase, drug design, malaria, aspartyl protease, glycoprotein, hydrolase, signal, zymogen; HET: IH4; 1.56A {Plasmodium falciparum} SCOP: b.50.1.2 PDB: 1pfz_A 1xdh_A* 1lf3_A 1w6h_A* 1w6i_A* 1lf4_A* 1lf2_A* 1lee_A* 1m43_A* 2igx_A* 1sme_A* 1me6_A* 1xe6_A* 1xe5_A* 2igy_A* 2r9b_A 3f9q_A 3qrv_A 3qs1_A* 2anl_A* ...
Probab=100.00 E-value=1.7e-51 Score=433.92 Aligned_cols=275 Identities=33% Similarity=0.622 Sum_probs=248.9
Q ss_pred CcceEeccccCCceEEEEEEEcCCCceEEEEEeCCCCceeeeCCCCCCCcCCCCCCCCCCCCCCceeECCeeEEEEecCC
Q 011143 75 DTDIVALNNFMDAQYFGEVSIGTPSQTFTVIFDTGSSNLWVPSAKCYFSVSCYFHSKYKSSHSSTYKRNGTSAAIQYGTG 154 (492)
Q Consensus 75 ~~~~~pl~n~~d~~Y~~~I~IGTP~Q~~~v~lDTGSs~~WV~s~~C~~~~~C~~~~~y~p~~SsT~~~~~~~~~~~Yg~G 154 (492)
....+||.|+.+.+|+++|+||||||++.|++||||+++||+|..|. ...|..++.|+|++|+||+..++.|.+.|++|
T Consensus 126 ~~~~~~L~n~~~~~Y~~~I~IGTP~Q~~~vi~DTGSs~lWV~~~~C~-~~~C~~~~~ydps~SsT~~~~~~~~~i~YgdG 204 (453)
T 2bju_A 126 SNDNIELVDFQNIMFYGDAEVGDNQQPFTFILDTGSANLWVPSVKCT-TAGCLTKHLYDSSKSRTYEKDGTKVEMNYVSG 204 (453)
T ss_dssp CSEEEEEEEETTTEEEEEEEETTTTEEEEEEEETTCCCEEEEBTTCC-STTGGGSCCBCGGGCTTCEEEEEEEEEECSSS
T ss_pred CCCceeeEecCCCEEEEEEEECCCCeEEEEEEECCCcceEEeccCCC-ccccCCCCcCCCccCCceeECCcEEEEEcCCC
Confidence 34579999999999999999999999999999999999999999996 56899999999999999999999999999999
Q ss_pred eeEEEEEEeEeEeeeeeeecceEEEEEecc--cccccccccceEEeccccccccCccCchhhhhhhcCCCCCCeEEEEec
Q 011143 155 AISGFFSQDNVKVGDLVVKNQDFIEATKEA--SITFLAAKFDGILGLGFQEISIGKAIPVWYNMLDQGLVKEPVFSFWLN 232 (492)
Q Consensus 155 sv~G~~~~Dtv~lg~~~v~~~~Fg~a~~~~--~~~~~~~~~dGILGLG~~~~s~~~~~~~~~~L~~qg~I~~~~FSl~L~ 232 (492)
++.|.+++|+|++++.+++ +.||++.... +..+....++||||||++..+.....|++++|++||.|++++||+||+
T Consensus 205 s~~G~~~~Dtv~ig~~~v~-~~Fg~a~~~~~~g~~f~~~~~dGIlGLg~~~~s~~~~~~~~~~L~~qg~i~~~~FS~~L~ 283 (453)
T 2bju_A 205 TVSGFFSKDLVTVGNLSLP-YKFIEVIDTNGFEPTYTASTFDGILGLGWKDLSIGSVDPIVVELKNQNKIENALFTFYLP 283 (453)
T ss_dssp EEEEEEEEEEEEETTEEEE-EEEEEEEECGGGTTHHHHSSCCEEEECSCGGGSTTCCCCHHHHHHHTTSSSSCEEEEECC
T ss_pred CeEEEEEEEEEEEeCcEEE-EEEEEEEEecccCccccccCCceeEeccCCcccccCCCcHHHHHHHCCCCCCCEEEEEeC
Confidence 9999999999999999999 9999999876 444555678999999999988777889999999999999999999998
Q ss_pred CCCCCCCCeeEEECccCCCCcccccEEEecccccceEEEeeeEEEcCeeeeecCCCceEEEcCCcccccccHHHHHHHHH
Q 011143 233 RDIEGEEGGEIVFGGVDPDHYKGEHTYVPVTKKGYWQFEMGDVLIDGETTGYCSTGCNAIADSGTSLLAGPTTIITQINH 312 (492)
Q Consensus 233 ~~~~~~~~G~L~fGgiD~~~y~G~l~~~pv~~~~~w~v~l~~i~vgg~~~~~~~~~~~aiiDTGTt~i~lP~~~~~~l~~ 312 (492)
+.+ ..+|+|+|||+|+++|.|++.|+|+.+.+||.|.++ |.||+ .+ + .+..+||||||+++++|++++++|.+
T Consensus 284 ~~~--~~~G~l~fGg~D~~~y~G~l~~~pv~~~~~w~V~l~-I~Vgg-~~--~-~~~~aIiDSGTsl~~lP~~~~~~l~~ 356 (453)
T 2bju_A 284 VHD--KHTGFLTIGGIEERFYEGPLTYEKLNHDLYWQITLD-AHVGN-IM--L-EKANCIVDSGTSAITVPTDFLNKMLQ 356 (453)
T ss_dssp BTT--TBCEEEEESSCCGGGEEEEEEEEEEEEETTEEEEEE-EEETT-EE--E-EEEEEEECTTCCSEEECHHHHHHHTT
T ss_pred CCC--CCCeEEEECCCCHHHcCCceEEEecCCCceEEEEEE-EEECc-EE--e-ccccEEEcCCCCeEecCHHHHHHHHH
Confidence 862 348999999999999999999999999999999999 99999 33 2 56789999999999999999999999
Q ss_pred HhCCCcceecccccccccchhhHHHHHHhhcCcccccccccccccCCCcCcccccceeeccCCCCCCCCCCCCccchhhH
Q 011143 313 AIGASGVISQECKTLVDQYGKTILEMLIAETQPQKICSQMGLCTFDGTRGFSMGIESVIDKSSDKSSDGVHDSAMCSACE 392 (492)
Q Consensus 313 ~i~a~~~~~~~C~~~~~~fg~~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 392 (492)
++++..
T Consensus 357 ~i~~~~-------------------------------------------------------------------------- 362 (453)
T 2bju_A 357 NLDVIK-------------------------------------------------------------------------- 362 (453)
T ss_dssp TSSCEE--------------------------------------------------------------------------
T ss_pred HhCCcc--------------------------------------------------------------------------
Confidence 987651
Q ss_pred HHHHHHHHHhhhcccHHHHHHHHHhhcCCCCCCcc-cccccccccCCCCcEEEEECCEEEeeCccceEEEecC
Q 011143 393 MAVIWMQNKLRRNETADQILNYVNQLCDRLPSPNG-ESAVDCDNLSSMPNVSFTIGGKVFDLAPNEVWLYADF 464 (492)
Q Consensus 393 ~~~~~~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~-~~~~~c~~~~~~p~i~~~~~g~~~~l~~~~y~~~~~~ 464 (492)
...| .|.++|+. ..+|+|+|.|+|.+++|+|++|+++...
T Consensus 363 -------------------------------~~~g~~~~v~C~~-~~~P~itf~fgg~~~~l~~~~yi~~~~~ 403 (453)
T 2bju_A 363 -------------------------------VPFLPFYVTLCNN-SKLPTFEFTSENGKYTLEPEYYLQHIED 403 (453)
T ss_dssp -------------------------------CTTSSCEEEETTC-TTCCCEEEECSSCEEEECHHHHEEECTT
T ss_pred -------------------------------cCCCceEEEecCC-CCCCcEEEEECCEEEEECHHHhEeeccc
Confidence 1245 68899998 7899999999999999999999998754
No 14
>1mpp_A Pepsin; hydrolase(acid proteinase); 2.00A {Rhizomucor pusillus} SCOP: b.50.1.2 PDB: 2asi_A* 2rmp_A*
Probab=100.00 E-value=6.3e-51 Score=419.15 Aligned_cols=280 Identities=30% Similarity=0.505 Sum_probs=249.8
Q ss_pred cceEeccccCCceEEEEEEEcCCCceEEEEEeCCCCceeeeCCCCCCCcCCCCCCCCCCCCCCceeECCeeEEEEecCCe
Q 011143 76 TDIVALNNFMDAQYFGEVSIGTPSQTFTVIFDTGSSNLWVPSAKCYFSVSCYFHSKYKSSHSSTYKRNGTSAAIQYGTGA 155 (492)
Q Consensus 76 ~~~~pl~n~~d~~Y~~~I~IGTP~Q~~~v~lDTGSs~~WV~s~~C~~~~~C~~~~~y~p~~SsT~~~~~~~~~~~Yg~Gs 155 (492)
...+||.|+.+.+|+++|.||||||+++|+|||||+++||++..|.....|..++.|+|++|+||+..++.|.+.|++|+
T Consensus 7 ~~~~~l~~~~~~~Y~~~i~iGtP~q~~~v~~DTGSs~~Wv~~~~C~~~~~C~~~~~y~~~~SsT~~~~~~~~~i~Yg~Gs 86 (361)
T 1mpp_A 7 VDTPGLYDFDLEEYAIPVSIGTPGQDFYLLFDTGSSDTWVPHKGCDNSEGCVGKRFFDPSSSSTFKETDYNLNITYGTGG 86 (361)
T ss_dssp EEEEEEEETTTTEEEEEEEETTTTEEEEEEEETTCCCCEEEBTTCCGGGTCCSSCCBCGGGCTTCEEEEEEEEEECSSCE
T ss_pred cceEEeecCCCCEEEEEEEECCCCcEEEEEEcCCCCCeEECCCCCCCCccCCCCCcCCCccCCceEecCCeEEEEECCce
Confidence 45689999999999999999999999999999999999999999942348998999999999999999999999999999
Q ss_pred eEEEEEEeEeEeeeeeeecceEEEEEeccc-----ccccccccceEEeccccccccCc------cCchhhhhhhcCCCCC
Q 011143 156 ISGFFSQDNVKVGDLVVKNQDFIEATKEAS-----ITFLAAKFDGILGLGFQEISIGK------AIPVWYNMLDQGLVKE 224 (492)
Q Consensus 156 v~G~~~~Dtv~lg~~~v~~~~Fg~a~~~~~-----~~~~~~~~dGILGLG~~~~s~~~------~~~~~~~L~~qg~I~~ 224 (492)
+.|.+++|+|++++.+++++.||++....+ ..+....++||||||++..+... ..+++++|++||+|++
T Consensus 87 ~~G~~~~D~v~~g~~~v~~~~fg~~~~~~~~~~~~~~~~~~~~~GilGLg~~~~s~~~~~~~~~~~~~~~~l~~~g~i~~ 166 (361)
T 1mpp_A 87 ANGIYFRDSITVGGATVKQQTLAYVDNVSGPTAEQSPDSELFLDGIFGAAYPDNTAMEAEYGDTYNTVHVNLYKQGLISS 166 (361)
T ss_dssp EEEEEEEEEEEETTEEEEEEEEEEEEEEESGGGSSCTTCSSCCCEEEECSCGGGSHHHHHHSCCCCCHHHHHHHTTSSSS
T ss_pred EEEEEEEEEEEECCEEEeceEEEEEEeccCccccccccccCCCCCEEEeCCcccccccccccccCCCHHHHHHHcCCCCC
Confidence 999999999999999999999999998754 34555678999999998877544 7889999999999999
Q ss_pred CeEEEEecCCCCCCCCeeEEECccCCCCcccccEEEeccccc----ceEEEeeeEEEcCeeeeecCCCceEE-EcCCccc
Q 011143 225 PVFSFWLNRDIEGEEGGEIVFGGVDPDHYKGEHTYVPVTKKG----YWQFEMGDVLIDGETTGYCSTGCNAI-ADSGTSL 299 (492)
Q Consensus 225 ~~FSl~L~~~~~~~~~G~L~fGgiD~~~y~G~l~~~pv~~~~----~w~v~l~~i~vgg~~~~~~~~~~~ai-iDTGTt~ 299 (492)
++||+||++. ...|+|+|||+|+++|.|++.|+|+.+.. +|.|.+++|.|+++.+. +.....+| |||||++
T Consensus 167 ~~FS~~l~~~---~~~G~l~fGg~d~~~~~g~l~~~p~~~~~~~~~~~~v~l~~i~v~~~~~~-~~~~~~ai~iDSGTt~ 242 (361)
T 1mpp_A 167 PVFSVYMNTN---DGGGQVVFGGVNNTLLGGDIQYTDVLKSRGGYFFWDAPVTGVKIDGSDAV-SFDGAQAFTIDTGTNF 242 (361)
T ss_dssp SEEEEECCCS---SSEEEEEESSCCGGGBSSCCEEEECEEETTEEEEEEEEEEEEEETTEEEE-EEEEEEEEEEETTCCS
T ss_pred cEEEEEecCC---CCCcEEEEecCChhhcCCceEEEEcccCCCceeEEEEEEeEEEECCeeec-cCCCCEEEEECCCCCc
Confidence 9999999885 23799999999999999999999998765 99999999999998764 23467899 9999999
Q ss_pred ccccHHHHHHHHHHhCCCcceecccccccccchhhHHHHHHhhcCcccccccccccccCCCcCcccccceeeccCCCCCC
Q 011143 300 LAGPTTIITQINHAIGASGVISQECKTLVDQYGKTILEMLIAETQPQKICSQMGLCTFDGTRGFSMGIESVIDKSSDKSS 379 (492)
Q Consensus 300 i~lP~~~~~~l~~~i~a~~~~~~~C~~~~~~fg~~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~~~~ 379 (492)
+++|++++++|++++++..
T Consensus 243 ~~lP~~~~~~l~~~~~~~~------------------------------------------------------------- 261 (361)
T 1mpp_A 243 FIAPSSFAEKVVKAALPDA------------------------------------------------------------- 261 (361)
T ss_dssp EEEEHHHHHHHHHHHCTTC-------------------------------------------------------------
T ss_pred eeCCHHHHHHHHHHhCCcc-------------------------------------------------------------
Confidence 9999999999999998751
Q ss_pred CCCCCCccchhhHHHHHHHHHHhhhcccHHHHHHHHHhhcCCCCCCcccccccccccCCC-CcEEEEE--C-----CEEE
Q 011143 380 DGVHDSAMCSACEMAVIWMQNKLRRNETADQILNYVNQLCDRLPSPNGESAVDCDNLSSM-PNVSFTI--G-----GKVF 451 (492)
Q Consensus 380 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~c~~~~~~-p~i~~~~--~-----g~~~ 451 (492)
+...+.|.++|+.+.++ |+|+|.| + |+++
T Consensus 262 -------------------------------------------~~~~g~~~~~C~~~~~~~p~i~f~f~~g~~~~~g~~~ 298 (361)
T 1mpp_A 262 -------------------------------------------TESQQGYTVPCSKYQDSKTTFSLVLQKSGSSSDTIDV 298 (361)
T ss_dssp -------------------------------------------EEETTEEEEEHHHHTTCCCEEEEEEECTTCSSCEEEE
T ss_pred -------------------------------------------cCCCCcEEEECCCcccCCCcEEEEEEcCCcCCCCeEE
Confidence 11346788999988888 9999999 8 8999
Q ss_pred eeCccceEEEec
Q 011143 452 DLAPNEVWLYAD 463 (492)
Q Consensus 452 ~l~~~~y~~~~~ 463 (492)
+|+|++|+++..
T Consensus 299 ~i~~~~y~~~~~ 310 (361)
T 1mpp_A 299 SVPISKMLLPVD 310 (361)
T ss_dssp EEEGGGGEEECS
T ss_pred EECHHHhEEecC
Confidence 999999999865
No 15
>1yg9_A Aspartic protease BLA G 2; allegren, hydrolase, allergen; HET: NAG; 1.30A {Blattella germanica} PDB: 2nr6_A* 3liz_A*
Probab=100.00 E-value=8.5e-51 Score=413.42 Aligned_cols=273 Identities=29% Similarity=0.498 Sum_probs=246.6
Q ss_pred ceEeccccCCceEEEEEEEcCCCceEEEEEeCCCCceeeeCCCCCCCcCC--CCCCCCCCCCCCceeECCeeEEEEecCC
Q 011143 77 DIVALNNFMDAQYFGEVSIGTPSQTFTVIFDTGSSNLWVPSAKCYFSVSC--YFHSKYKSSHSSTYKRNGTSAAIQYGTG 154 (492)
Q Consensus 77 ~~~pl~n~~d~~Y~~~I~IGTP~Q~~~v~lDTGSs~~WV~s~~C~~~~~C--~~~~~y~p~~SsT~~~~~~~~~~~Yg~G 154 (492)
..+||.|+.+.+|+++|+|| ||+++|++||||+++||++..|. ...| ..++.|+|++| ||+..++.|.+.|++|
T Consensus 7 ~~~~l~n~~~~~Y~~~i~iG--~Q~~~v~~DTGSs~lWv~~~~C~-~~~C~~~~~~~y~~~~S-T~~~~~~~~~i~Yg~G 82 (330)
T 1yg9_A 7 LYKLVHVFINTQYAGITKIG--NQNFLTVFDSTSCNVVVASQECV-GGACVCPNLQKYEKLKP-KYISDGNVQVKFFDTG 82 (330)
T ss_dssp SCSCEEEEECTTSEEEEEET--TEEEEEEEETTCCCEEEECTTCC-SGGGGSTTCCCCCCSSC-EEEEEEEEEEEETTTE
T ss_pred eEeeeecCCCCEEEEEEEEC--CEEEEEEEeCCCcceEEecCCCC-CccCcccccCccCCCCC-ceEECCCEEEEEECCc
Confidence 45799999999999999999 89999999999999999999996 4589 88899999999 9999999999999999
Q ss_pred eeEEEEEEeEeEeeeeeeecceEEEEEecccccccccccceEEeccccccc-cCccCchhhhhhhcCCCCCCeEEEEecC
Q 011143 155 AISGFFSQDNVKVGDLVVKNQDFIEATKEASITFLAAKFDGILGLGFQEIS-IGKAIPVWYNMLDQGLVKEPVFSFWLNR 233 (492)
Q Consensus 155 sv~G~~~~Dtv~lg~~~v~~~~Fg~a~~~~~~~~~~~~~dGILGLG~~~~s-~~~~~~~~~~L~~qg~I~~~~FSl~L~~ 233 (492)
++.|.+++|+|++++.+++++.||++... +..|....++||||||++..+ .....+++++|++||+| +++||+||++
T Consensus 83 s~~G~~~~Dtv~ig~~~~~~~~fg~~~~~-~~~f~~~~~~GilGLg~~~~s~~~~~~~~~~~l~~qg~i-~~~FS~~l~~ 160 (330)
T 1yg9_A 83 SAVGRGIEDSLTISQLTTSQQDIVLADEL-SQEVCILSADVVVGIAAPGCPNALKGKTVLENFVEENLI-APVFSIHHAR 160 (330)
T ss_dssp EEEEEEEEEEEEETTEEEEEEEEEEEEEE-CTHHHHTTCSEEEECSCTTSCCTTSCCCHHHHHHHTTSS-CSEEEEEEEE
T ss_pred eEEEEEEEEEEEECCEEEcCeEEEEEEEc-ccccccccCceEEEcCcchhccccCCCCHHHHHHhcCCC-CceEEEEEcC
Confidence 99999999999999999999999999987 444555678999999999887 66778899999999999 9999999988
Q ss_pred CCCCCCCeeEEECccCCCCcccccEEEecccccceEEEeeeEEEcCeeeeecCCCceEEEcCCcccccccHHHHHHHHHH
Q 011143 234 DIEGEEGGEIVFGGVDPDHYKGEHTYVPVTKKGYWQFEMGDVLIDGETTGYCSTGCNAIADSGTSLLAGPTTIITQINHA 313 (492)
Q Consensus 234 ~~~~~~~G~L~fGgiD~~~y~G~l~~~pv~~~~~w~v~l~~i~vgg~~~~~~~~~~~aiiDTGTt~i~lP~~~~~~l~~~ 313 (492)
..+....|+|+|||+|+++|+|++.|+|+.+.+||.|.+++|.|+++.+. ..+..+||||||+++++|++++++|+++
T Consensus 161 ~~~~~~~G~l~fGg~d~~~~~g~l~~~p~~~~~~w~v~l~~i~v~~~~~~--~~~~~aiiDSGTs~~~lP~~~~~~l~~~ 238 (330)
T 1yg9_A 161 FQDGEHFGEIIFGGSDWKYVDGEFTYVPLVGDDSWKFRLDGVKIGDTTVA--PAGTQAIIDTSKAIIVGPKAYVNPINEA 238 (330)
T ss_dssp CTTSCEEEEEEETSCCGGGEEEEEEEEEBSCTTSCCEECSEEEETTEEEE--CTTCEEEECTTCSSEEEEHHHHHHHHHH
T ss_pred CCCCCCCCEEEECCcCHHHccCceEEEECCCCCEEEEEeCeEEECCEEEc--CCCcEEEEecCCccccCCHHHHHHHHHH
Confidence 64333479999999999999999999999999999999999999998764 4578899999999999999999999999
Q ss_pred hCCCcceecccccccccchhhHHHHHHhhcCcccccccccccccCCCcCcccccceeeccCCCCCCCCCCCCccchhhHH
Q 011143 314 IGASGVISQECKTLVDQYGKTILEMLIAETQPQKICSQMGLCTFDGTRGFSMGIESVIDKSSDKSSDGVHDSAMCSACEM 393 (492)
Q Consensus 314 i~a~~~~~~~C~~~~~~fg~~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 393 (492)
+++..
T Consensus 239 ~~~~~--------------------------------------------------------------------------- 243 (330)
T 1yg9_A 239 IGCVV--------------------------------------------------------------------------- 243 (330)
T ss_dssp HTCEE---------------------------------------------------------------------------
T ss_pred hCCcc---------------------------------------------------------------------------
Confidence 98761
Q ss_pred HHHHHHHHhhhcccHHHHHHHHHhhcCCCCCCcc--cc-cccccccCCCCcEEEEECCEEEeeCccceEEEe
Q 011143 394 AVIWMQNKLRRNETADQILNYVNQLCDRLPSPNG--ES-AVDCDNLSSMPNVSFTIGGKVFDLAPNEVWLYA 462 (492)
Q Consensus 394 ~~~~~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~--~~-~~~c~~~~~~p~i~~~~~g~~~~l~~~~y~~~~ 462 (492)
...| .| .++|+.+..+|+|+|.|+|++++|+|++|+++.
T Consensus 244 ------------------------------~~~g~~~~~~~~C~~~~~~p~i~f~fgg~~~~l~~~~y~~~~ 285 (330)
T 1yg9_A 244 ------------------------------EKTTTRRICKLDCSKIPSLPDVTFVINGRNFNISSQYYIQQN 285 (330)
T ss_dssp ------------------------------EECSSCEEEEECGGGGGGSCCEEEEETTEEEEECHHHHEEEE
T ss_pred ------------------------------cCCCceEEEEEECCCccccCcEEEEECCEEEEECHHHhcccC
Confidence 0134 67 899998889999999999999999999999986
No 16
>2apr_A Rhizopuspepsin; hydrolase (aspartic proteinase); 1.80A {Rhizopus microsporus var} SCOP: b.50.1.2 PDB: 3apr_E* 4apr_E* 5apr_E* 6apr_E* 1uh9_A 1uh8_A 1uh7_A
Probab=100.00 E-value=2.8e-48 Score=394.05 Aligned_cols=228 Identities=37% Similarity=0.699 Sum_probs=203.0
Q ss_pred ccCCceEEEEEEEcCCCceEEEEEeCCCCceeeeCCCCCCCcCCCCCCCCCCCCCCceeECCeeEEEEecCCe-eEEEEE
Q 011143 83 NFMDAQYFGEVSIGTPSQTFTVIFDTGSSNLWVPSAKCYFSVSCYFHSKYKSSHSSTYKRNGTSAAIQYGTGA-ISGFFS 161 (492)
Q Consensus 83 n~~d~~Y~~~I~IGTP~Q~~~v~lDTGSs~~WV~s~~C~~~~~C~~~~~y~p~~SsT~~~~~~~~~~~Yg~Gs-v~G~~~ 161 (492)
++.+.+|+++|.||||||+++|++||||+++||++..|..+ |..++.|+|++|+||+..++.|.+.|++|+ +.|.++
T Consensus 11 ~~~~~~Y~~~i~iGTP~q~~~v~~DTGSs~lWv~~~~c~~c--~~~~~~y~~~~SsT~~~~~~~~~i~Yg~Gs~~~G~~~ 88 (325)
T 2apr_A 11 YGNDIEYYGQVTIGTPGKKFNLDFDTGSSDLWIASTLCTNC--GSGQTKYDPNQSSTYQADGRTWSISYGDGSSASGILA 88 (325)
T ss_dssp ETTTTEEEEEEEETTTTEEEEEEEETTCCCCEEEBTTCSSC--CTTSCCBCGGGCTTCEEEEEEEEEECTTSCEEEEEEE
T ss_pred cCCCCEEEEEEEECCCCeEEEEEEcCCCCCEEEccCCCchH--hcCCCCCCcccCCCeeeCCCEEEEEECCCCCEEEEEE
Confidence 45688999999999999999999999999999999999743 677889999999999999999999999998 799999
Q ss_pred EeEeEeeeeeeecceEEEEEecccccccccccceEEecccccccc-CccCchhhhhhhcCCCCCCeEEEEecCCCCCCCC
Q 011143 162 QDNVKVGDLVVKNQDFIEATKEASITFLAAKFDGILGLGFQEISI-GKAIPVWYNMLDQGLVKEPVFSFWLNRDIEGEEG 240 (492)
Q Consensus 162 ~Dtv~lg~~~v~~~~Fg~a~~~~~~~~~~~~~dGILGLG~~~~s~-~~~~~~~~~L~~qg~I~~~~FSl~L~~~~~~~~~ 240 (492)
+|+|++++.+++++.||++....+. |....++||||||++..+. ....+++++|++||+|++++||+||.+... ...
T Consensus 89 ~D~v~~g~~~v~~~~fg~~~~~~~~-f~~~~~~GilGLg~~~~s~~~~~~~~~~~l~~qg~i~~~~FS~~l~~~~~-~~~ 166 (325)
T 2apr_A 89 KDNVNLGGLLIKGQTIELAKREAAS-FASGPNDGLLGLGFDTITTVRGVKTPMDNLISQGLISRPIFGVYLGKAKN-GGG 166 (325)
T ss_dssp EEEEEETTEEEEEEEEEEEEEECHH-HHTSSCSEEEECSCGGGCSSTTCCCHHHHHHHTTSCSSSEEEEEECCGGG-TCC
T ss_pred EEEEEECCEEECcEEEEEEeccCcc-cccCCCceEEEeCCcccccccCCCCHHHHHHhcCCCCCceEEEEecCCCC-CCC
Confidence 9999999999999999999876543 4445589999999988764 356789999999999999999999976421 237
Q ss_pred eeEEECccCCCCcccccEEEecc-cccceEEEeeeEEEcCeeeeecCCCceEEEcCCcccccccHHHHHHHHHHhCCC
Q 011143 241 GEIVFGGVDPDHYKGEHTYVPVT-KKGYWQFEMGDVLIDGETTGYCSTGCNAIADSGTSLLAGPTTIITQINHAIGAS 317 (492)
Q Consensus 241 G~L~fGgiD~~~y~G~l~~~pv~-~~~~w~v~l~~i~vgg~~~~~~~~~~~aiiDTGTt~i~lP~~~~~~l~~~i~a~ 317 (492)
|+|+|||+|+++|.|++.|+|+. ..+||.|.+++|+||+ .+ +.....+||||||+++++|+++++++.+++.+.
T Consensus 167 G~l~fGg~d~~~~~g~l~~~p~~~~~~~~~v~l~~i~vg~-~~--~~~~~~~iiDSGTs~~~lP~~~~~~~~~~~~~~ 241 (325)
T 2apr_A 167 GEYIFGGYDSTKFKGSLTTVPIDNSRGWWGITVDRATVGT-ST--VASSFDGILDTGTTLLILPNNIAASVARAYGAS 241 (325)
T ss_dssp EEEEETCCCGGGBCSCCEEEECBCTTSSCEEEECEEEETT-EE--EECCEEEEECTTCSSEEEEHHHHHHHHHHHTCE
T ss_pred CEEEEccCCchhccCceEEEEccCCCCEEEEEEeEEEECC-Ee--cCCCceEEEecCCccEECCHHHHHHHHHHHhcc
Confidence 99999999999999999999996 4789999999999999 33 356789999999999999999999999999765
No 17
>1b5f_A Protein (cardosin A); hydrolase, aspartic proteinase; HET: NAG FUC BMA MAN; 1.72A {Cynara cardunculus} SCOP: b.50.1.2
Probab=100.00 E-value=1.1e-48 Score=380.27 Aligned_cols=237 Identities=69% Similarity=1.177 Sum_probs=217.1
Q ss_pred ceEeccccCCceEEEEEEEcCCCceEEEEEeCCCCceeeeCCCCCCCcCCCCCCCCCCCCCCceeECCeeEEEEecCCee
Q 011143 77 DIVALNNFMDAQYFGEVSIGTPSQTFTVIFDTGSSNLWVPSAKCYFSVSCYFHSKYKSSHSSTYKRNGTSAAIQYGTGAI 156 (492)
Q Consensus 77 ~~~pl~n~~d~~Y~~~I~IGTP~Q~~~v~lDTGSs~~WV~s~~C~~~~~C~~~~~y~p~~SsT~~~~~~~~~~~Yg~Gsv 156 (492)
..+||.|+.+.+|+++|.||||||+++|+|||||+++||++..|..+..|..++.|+|++|+||+..++.+.+.|++|++
T Consensus 3 ~~~~l~n~~~~~Y~~~i~iGtP~q~~~v~~DTGSs~lWv~~~~C~~~~~C~~~~~y~~~~SsT~~~~~~~~~i~Yg~Gs~ 82 (239)
T 1b5f_A 3 AVVALTNDRDTSYFGEIGIGTPPQKFTVIFDTGSSVLWVPSSKCINSKACRAHSMYESSDSSTYKENGTFGAIIYGTGSI 82 (239)
T ss_dssp EEEEEEEETTTEEEEEEEETTTTEEEEEEEETTCCCEEEEBTTCCSCHHHHTSCCBCGGGCTTCEEEEEEEEEECSSCEE
T ss_pred ceeeeeecCCCEEEEEEEECCCCeEEEEEEeCCCcceEEEcCCCCCCcccCCCCCCCCccCCCeeeCCcEEEEEECCCcE
Confidence 46899999999999999999999999999999999999999999645689989999999999999999999999999999
Q ss_pred EEEEEEeEeEeeeeeeecceEEEEEecccccccccccceEEeccccccccCccCchhhhhhhcCCCCCCeEEEEecCCCC
Q 011143 157 SGFFSQDNVKVGDLVVKNQDFIEATKEASITFLAAKFDGILGLGFQEISIGKAIPVWYNMLDQGLVKEPVFSFWLNRDIE 236 (492)
Q Consensus 157 ~G~~~~Dtv~lg~~~v~~~~Fg~a~~~~~~~~~~~~~dGILGLG~~~~s~~~~~~~~~~L~~qg~I~~~~FSl~L~~~~~ 236 (492)
.|.+++|+|++++..++++.||++....+..|....++||||||++..+ .|++++|++||+|++++||+||++..+
T Consensus 83 ~G~~~~D~v~~g~~~v~~~~fg~~~~~~~~~f~~~~~~GilGLg~~~~s----~p~~~~l~~qg~i~~~~FS~~l~~~~~ 158 (239)
T 1b5f_A 83 TGFFSQDSVTIGDLVVKEQDFIEATDEADNVFLHRLFDGILGLSFQTIS----VPVWYNMLNQGLVKERRFSFWLNRNVD 158 (239)
T ss_dssp EEEEEEEEEEETTEEEEEEEEEEEEEECHHHHTTCSCCEEEECSCCSSS----CCHHHHHHHTTCCSSSEEEEEECCSCS
T ss_pred EEEEEEEEEEECCcEEccEEEEEEEeccCccccccCcceEEecCccccc----cHHHHHHHHCCCCCCCEEEEEEeCCCC
Confidence 9999999999999999999999998776545556678999999998766 568899999999999999999988643
Q ss_pred CCCCeeEEECccCCCCcccccEEEecccccceEEEeeeEEEcCeeeeecCCCceEEEcCCcccccccHHHHHHHHHHhCC
Q 011143 237 GEEGGEIVFGGVDPDHYKGEHTYVPVTKKGYWQFEMGDVLIDGETTGYCSTGCNAIADSGTSLLAGPTTIITQINHAIGA 316 (492)
Q Consensus 237 ~~~~G~L~fGgiD~~~y~G~l~~~pv~~~~~w~v~l~~i~vgg~~~~~~~~~~~aiiDTGTt~i~lP~~~~~~l~~~i~a 316 (492)
....|+|+|||+|+++|.|++.|+|+.+.+||.|.+++|.|+++.+.++.....+||||||+++++|++++++|++++++
T Consensus 159 ~~~~G~l~fGg~d~~~~~g~l~~~p~~~~~~~~v~l~~i~v~~~~~~~~~~~~~aiiDTGTt~~~lP~~~~~~i~~~iga 238 (239)
T 1b5f_A 159 EEEGGELVFGGLDPNHFRGDHTYVPVTYQYYWQFGIGDVLIGDKSTGFCAPGCQAFADSGTSLLSGPTAIVTQINHAIGA 238 (239)
T ss_dssp SSCCEEEEETSCCGGGEEEEEEEEEEEEETTEEEEECCEEETTEECCTTTTCEEEEECTTCSSEEECHHHHHHHHHHTTC
T ss_pred CCCCeEEEECCcChhhccCceEEEEcccCCeEEEEeeEEEECCEEecccCCCCEEEEecCcchhhCCHHHHHHHHHHhCC
Confidence 34489999999999999999999999999999999999999999876666678999999999999999999999999987
Q ss_pred C
Q 011143 317 S 317 (492)
Q Consensus 317 ~ 317 (492)
+
T Consensus 239 ~ 239 (239)
T 1b5f_A 239 N 239 (239)
T ss_dssp C
T ss_pred C
Confidence 4
No 18
>3c9x_A Trichoderma reesei aspartic protease; aspartic proteinase, aspartyl protease, hydrolase; 1.70A {Trichoderma reesei} PDB: 3c9y_A* 3emy_A*
Probab=100.00 E-value=4.4e-48 Score=393.21 Aligned_cols=225 Identities=32% Similarity=0.501 Sum_probs=199.1
Q ss_pred ccCCceEEEEEEEcCCCceEEEEEeCCCCceeeeCCCCCCCcCCCCCCCCCCCCCCceeE-CCeeEEEEecCCe-eEEEE
Q 011143 83 NFMDAQYFGEVSIGTPSQTFTVIFDTGSSNLWVPSAKCYFSVSCYFHSKYKSSHSSTYKR-NGTSAAIQYGTGA-ISGFF 160 (492)
Q Consensus 83 n~~d~~Y~~~I~IGTP~Q~~~v~lDTGSs~~WV~s~~C~~~~~C~~~~~y~p~~SsT~~~-~~~~~~~~Yg~Gs-v~G~~ 160 (492)
.+.+.+|+++|.||||||+++|++||||+++||++..|. ...|..++.|+|++|+||+. .++.|.+.|++|+ +.|.+
T Consensus 11 ~~~~~~Y~~~i~iGTP~Q~~~v~~DTGSs~lWv~~~~C~-~~~~~~~~~y~~~~SsT~~~~~~~~~~i~Yg~Gs~~~G~~ 89 (329)
T 3c9x_A 11 DSADSEYITSVSIGTPAQVLPLDFDTGSSDLWVFSSETP-KSSATGHAIYTPSKSSTSKKVSGASWSISYGDGSSSSGDV 89 (329)
T ss_dssp STTCCCEEEEEEETTTTEEEEEEEETTCCCEEECBTTSC-HHHHTTSCCBCGGGCTTCEECTTCBEEEECTTSCEEEEEE
T ss_pred CCCCCEEEEEEEECCCCeEEEEEEcCCCCCeEEecCCCC-ccccCCCCcCCcccCcCceEcCCCeEEEEeCCCCcEEEEE
Confidence 456789999999999999999999999999999999996 33566789999999999999 6899999999998 79999
Q ss_pred EEeEeEeeeeeeecceEEEEEecccccccccccceEEecccccccc---CccCchhhhhhhcCCCCCCeEEEEecCCCCC
Q 011143 161 SQDNVKVGDLVVKNQDFIEATKEASITFLAAKFDGILGLGFQEISI---GKAIPVWYNMLDQGLVKEPVFSFWLNRDIEG 237 (492)
Q Consensus 161 ~~Dtv~lg~~~v~~~~Fg~a~~~~~~~~~~~~~dGILGLG~~~~s~---~~~~~~~~~L~~qg~I~~~~FSl~L~~~~~~ 237 (492)
++|+|++++.+++++.||++....+..+....++||||||++..+. ....+++++|+++ |++++||+||.+.
T Consensus 90 ~~D~v~ig~~~v~~~~fg~~~~~~~~~~~~~~~~GilGLg~~~~s~~~~~~~~~~~~~l~~~--i~~~~FS~~l~~~--- 164 (329)
T 3c9x_A 90 YTDKVTIGGFSVNTQGVESATRVSTEFVQDTVISGLVGLAFDSGNQVRPHPQKTWFSNAASS--LAEPLFTADLRHG--- 164 (329)
T ss_dssp EEEEEEETTEEEEEEEEEEEEEECHHHHHCTTCCEEEECSCGGGCCCBSSCCCCHHHHHHTT--SSSSEEEEECCSS---
T ss_pred EEEEEEECCEEEcceEEEEEEecCccccccCCCceeEEeCcccccccCCCCCCCHHHHHHHh--cCCCEEEEEecCC---
Confidence 9999999999999999999997654323335779999999988765 2457899999886 8899999999874
Q ss_pred CCCeeEEECccCCCCcccccEEEecc-cccceEEEeeeEEEcCeeeeecCCCceEEEcCCcccccccHHHHHHHHHHhCC
Q 011143 238 EEGGEIVFGGVDPDHYKGEHTYVPVT-KKGYWQFEMGDVLIDGETTGYCSTGCNAIADSGTSLLAGPTTIITQINHAIGA 316 (492)
Q Consensus 238 ~~~G~L~fGgiD~~~y~G~l~~~pv~-~~~~w~v~l~~i~vgg~~~~~~~~~~~aiiDTGTt~i~lP~~~~~~l~~~i~a 316 (492)
..|+|+|||+|+++|.|++.|+|+. ..+||.|.+++|.||++.+. .....+||||||+++++|++++++|++++.+
T Consensus 165 -~~G~l~fGg~d~~~~~g~l~~~p~~~~~~~~~v~l~~i~v~~~~~~--~~~~~aiiDSGTt~~~lp~~~~~~i~~~i~~ 241 (329)
T 3c9x_A 165 -QNGSYNFGYIDTSVAKGPVAYTPVDNSQGFWEFTASGYSVGGGKLN--RNSIDGIADTGTTLLLLDDNVVDAYYANVQS 241 (329)
T ss_dssp -SCEEEEESSCCGGGCSSCEEEEECBCTTSSCEEEECCEEETTCCCC--SCCEEEEECTTCCSEEECHHHHHHHHTTCTT
T ss_pred -CCcEEEEeCcChhhcccceEEEEccCCCceEEEEEeeEEECCEecc--CCCceEEEECCCCcEeCCHHHHHHHHHhCCC
Confidence 2799999999999999999999997 57899999999999998763 5678999999999999999999999999844
No 19
>3fv3_A SAPP1P-secreted aspartic protease 1; secreted aspartic protease, virulence factor, H; HET: STA; 1.85A {Candida parapsilosis} SCOP: b.50.1.0 PDB: 3tne_A*
Probab=100.00 E-value=6.2e-48 Score=393.37 Aligned_cols=228 Identities=31% Similarity=0.513 Sum_probs=204.9
Q ss_pred ceEeccccCCceEEEEEEEcCCCceEEEEEeCCCCceeeeCCC--CCCCcCCCCCCCCCCCCCCceeECCeeEEEEecCC
Q 011143 77 DIVALNNFMDAQYFGEVSIGTPSQTFTVIFDTGSSNLWVPSAK--CYFSVSCYFHSKYKSSHSSTYKRNGTSAAIQYGTG 154 (492)
Q Consensus 77 ~~~pl~n~~d~~Y~~~I~IGTP~Q~~~v~lDTGSs~~WV~s~~--C~~~~~C~~~~~y~p~~SsT~~~~~~~~~~~Yg~G 154 (492)
..+||.|. +.+|+++|.||||||+++|++||||+++||++.. |.....|..++.|+|++|+||+..++.|.+.|++|
T Consensus 3 i~~~l~~~-~~~Y~~~i~iGtP~Q~~~v~~DTGSs~~Wv~~~~~~C~~~~~C~~~~~y~~~~SsT~~~~~~~~~i~Yg~g 81 (339)
T 3fv3_A 3 ISLSLINE-GPSYASKVSVGSNKQQQTVIIDTGSSDFWVVDSNAQCGKGVDCKSSGTFTPSSSSSYKNLGAAFTIRYGDG 81 (339)
T ss_dssp EEEEEEEC-SSSEEEEEEETTTTEEEEEEEETTCCCEEEEEEEEEECTTCCTTTTCCBCGGGCTTCEEEEEEEEEECTTS
T ss_pred eeeEEEcC-CCEEEEEEEEcCCCcEEEEEEeCCCCceEEecCCCCCCCCCCCCCCCcCCCccCcceeeCCceEEEEECCC
Confidence 45788876 5689999999999999999999999999999765 76455899899999999999999999999999999
Q ss_pred -eeEEEEEEeEeEeeeeeeecceEEEEEecccccccccccceEEecccccccc----------CccCchhhhhhhcCCCC
Q 011143 155 -AISGFFSQDNVKVGDLVVKNQDFIEATKEASITFLAAKFDGILGLGFQEISI----------GKAIPVWYNMLDQGLVK 223 (492)
Q Consensus 155 -sv~G~~~~Dtv~lg~~~v~~~~Fg~a~~~~~~~~~~~~~dGILGLG~~~~s~----------~~~~~~~~~L~~qg~I~ 223 (492)
.+.|.+++|+|++++.+++++.||++..... .+||||||++..+. ....+++++|++||+|+
T Consensus 82 s~~~G~~~~D~v~~g~~~v~~~~fg~~~~~~~-------~~GilGLg~~~~~~~~~~~~~~~~~~~~~~~~~L~~~g~i~ 154 (339)
T 3fv3_A 82 STSQGTWGKDTVTINGVSITGQQIADVTQTSV-------DQGILGIGYTSNEAVYDTSGRQTTPNYDNVPVTLKKQGKIR 154 (339)
T ss_dssp CEEEEEEEEEEEEETTEEEEEEEEEEEEEESS-------SSCEEECSCGGGCCCBCTTSCBCSCCCCCHHHHHHHTTSCS
T ss_pred ceEEEEEEEEEEEECCEEECceEEEEEEecCC-------CceeEEecCccccccccccccccCccCCcHHHHHHHCCCCC
Confidence 5899999999999999999999999987543 48999999987653 23456899999999999
Q ss_pred CCeEEEEecCCCCCCCCeeEEECccCCCCcccccEEEecccccceEEEeeeEEEcCeeeeecCCCceEEEcCCccccccc
Q 011143 224 EPVFSFWLNRDIEGEEGGEIVFGGVDPDHYKGEHTYVPVTKKGYWQFEMGDVLIDGETTGYCSTGCNAIADSGTSLLAGP 303 (492)
Q Consensus 224 ~~~FSl~L~~~~~~~~~G~L~fGgiD~~~y~G~l~~~pv~~~~~w~v~l~~i~vgg~~~~~~~~~~~aiiDTGTt~i~lP 303 (492)
+++||+||++.. ...|+|+|||+|+++|.|++.|+|+..+.+|.|.+++|.|+++.+.. ...++|||||+++++|
T Consensus 155 ~~~fsl~l~~~~--~~~G~l~fGg~d~~~~~g~l~~~p~~~~~~~~v~l~~i~v~g~~~~~---~~~~iiDSGtt~~~lP 229 (339)
T 3fv3_A 155 TNAYSLYLNSPS--AETGTIIFGGVDNAKYSGKLVAEQVTSSQALTISLASVNLKGSSFSF---GDGALLDSGTTLTYFP 229 (339)
T ss_dssp SSEEEEECCCTT--CSEEEEEETEEETTSBSSCCEEEEBCCSSSCEEEEEEEEESSCEEEE---EEEEEECTTBSSEEEC
T ss_pred CceEEEEECCCC--CCCeEEEEeeechHHeecceEEEecccCccEEEEEEEEEECCEeecC---CccEEEeCCCCCEecC
Confidence 999999998763 23799999999999999999999999999999999999999998753 4679999999999999
Q ss_pred HHHHHHHHHHhCCC
Q 011143 304 TTIITQINHAIGAS 317 (492)
Q Consensus 304 ~~~~~~l~~~i~a~ 317 (492)
++++++|++++++.
T Consensus 230 ~~~~~~i~~~~~~~ 243 (339)
T 3fv3_A 230 SDFAAQLADKAGAR 243 (339)
T ss_dssp HHHHHHHHHHHTCE
T ss_pred HHHHHHHHHHcCCE
Confidence 99999999999876
No 20
>1oew_A Endothiapepsin; hydrolase, aspartic proteinase mechanism, atomic resolution, succinimide, anisotropic refinement; HET: SUI; 0.9A {Cryphonectria parasitica} SCOP: b.50.1.2 PDB: 1gkt_A* 1gvt_A* 1gvv_A* 1gvw_A* 1gvx_A* 1gvu_A* 1oex_A* 2jji_A* 2jjj_A* 2vs2_A* 3uri_A* 3urj_A* 3url_A* 3pww_A* 1e80_E* 1e81_E* 1e82_E* 1e5o_E* 1eed_P* 1epl_E* ...
Probab=100.00 E-value=6.2e-48 Score=392.12 Aligned_cols=222 Identities=34% Similarity=0.533 Sum_probs=196.1
Q ss_pred CCceEEEEEEEcCCCceEEEEEeCCCCceeeeCCCCCCCcCCCCCCCCCCCCCCceeE-CCeeEEEEecCCe-eEEEEEE
Q 011143 85 MDAQYFGEVSIGTPSQTFTVIFDTGSSNLWVPSAKCYFSVSCYFHSKYKSSHSSTYKR-NGTSAAIQYGTGA-ISGFFSQ 162 (492)
Q Consensus 85 ~d~~Y~~~I~IGTP~Q~~~v~lDTGSs~~WV~s~~C~~~~~C~~~~~y~p~~SsT~~~-~~~~~~~~Yg~Gs-v~G~~~~ 162 (492)
.+.+|+++|.||||||+++|++||||+++||++..|. ...| .++.|+|++|+||+. .++.|.+.|++|+ +.|.+++
T Consensus 13 ~~~~Y~~~i~iGTP~Q~~~v~~DTGSs~lWv~~~~C~-~~~~-~~~~y~~~~SsT~~~~~~~~~~i~Yg~Gs~~~G~~~~ 90 (329)
T 1oew_A 13 LDDAYITPVQIGTPAQTLNLDFDTGSSDLWVFSSETT-ASEV-XQTIYTPSKSTTAKLLSGATWSISYGDGSSSSGDVYT 90 (329)
T ss_dssp TCCCEEEEEEETTTTEEEEEEEETTCCCEEECBTTSC-GGGC--CCCBCGGGCTTCEEEEEEEEEEECTTSCEEEEEEEE
T ss_pred CCCEEEEEEEECCCCeEEEEEECCCCCCeEEecCCCC-cccc-ccCccCCccCccceecCCCeEEEEeCCCCcEEEEEEE
Confidence 5789999999999999999999999999999999996 3356 788999999999998 6889999999998 7999999
Q ss_pred eEeEeeeeeeecceEEEEEecccccccccccceEEecccccccc---CccCchhhhhhhcCCCCCCeEEEEecCCCCCCC
Q 011143 163 DNVKVGDLVVKNQDFIEATKEASITFLAAKFDGILGLGFQEISI---GKAIPVWYNMLDQGLVKEPVFSFWLNRDIEGEE 239 (492)
Q Consensus 163 Dtv~lg~~~v~~~~Fg~a~~~~~~~~~~~~~dGILGLG~~~~s~---~~~~~~~~~L~~qg~I~~~~FSl~L~~~~~~~~ 239 (492)
|+|++++.+++++.||++....+..+....++||||||++..+. ....+++++|+++ |++++||+||.+. .
T Consensus 91 D~v~~g~~~v~~~~fg~~~~~~~~~~~~~~~~GilGLg~~~~s~~~~~~~~~~~~~l~~~--i~~~~FS~~L~~~----~ 164 (329)
T 1oew_A 91 DTVSVGGLTVTGQAVESAKKVSSSFTEDSTIDGLLGLAFSTLNTVSPTQQKTFFDNAKAS--LDSPVFTADLGYH----A 164 (329)
T ss_dssp EEEEETTEEEEEEEEEEEEEECHHHHHCTTCCEEEECSCGGGCCCBSSCCCCHHHHHTTT--SSSSEEEEECCSS----S
T ss_pred EEEEECCEEEeeeEEEEEEecCccccccCCCceEEEeccccccccCcCCCCCHHHHHHHh--ccCcEEEEEccCC----C
Confidence 99999999999999999997655333335679999999988765 2467899999887 8899999999864 2
Q ss_pred CeeEEECccCCCCcccccEEEecc-cccceEEEeeeEEEcCeeeeecCCCceEEEcCCcccccccHHHHHHHHHHhCC
Q 011143 240 GGEIVFGGVDPDHYKGEHTYVPVT-KKGYWQFEMGDVLIDGETTGYCSTGCNAIADSGTSLLAGPTTIITQINHAIGA 316 (492)
Q Consensus 240 ~G~L~fGgiD~~~y~G~l~~~pv~-~~~~w~v~l~~i~vgg~~~~~~~~~~~aiiDTGTt~i~lP~~~~~~l~~~i~a 316 (492)
.|+|+|||+|+++|.|++.|+|+. ..+||.|.+++|+||++.+. .....+||||||+++++|++++++|++++.+
T Consensus 165 ~G~l~fGg~d~~~~~g~l~~~p~~~~~~~~~v~l~~i~v~~~~~~--~~~~~aiiDSGTt~~~lP~~~~~~l~~~i~~ 240 (329)
T 1oew_A 165 PGTYNFGFIDTTAYTGSITYTAVSTKQGFWEWTSTGYAVGSGTFK--STSIDGIADTGTTLLYLPATVVSAYWAQVSG 240 (329)
T ss_dssp CEEEEESCCCTTSSSSCCEEEECBCTTSSCEEEEEEEEETTSCCE--EEEEEEEECTTCCSEEECHHHHHHHHTTSTT
T ss_pred CeEEEEeccChHhcccceEEEEccCCCceEEEEEeeEEECCeecc--CCCceEEEeCCCCCEECCHHHHHHHHHhCCC
Confidence 799999999999999999999997 57899999999999998753 3467899999999999999999999999843
No 21
>1j71_A Candidapepsin, aspartic proteinase; candida tropicalis aspartic protease, SAPT1, hydrolase; 1.80A {Candida tropicalis} SCOP: b.50.1.2
Probab=100.00 E-value=8.3e-48 Score=391.92 Aligned_cols=228 Identities=29% Similarity=0.501 Sum_probs=204.2
Q ss_pred ceEeccccCCceEEEEEEEcCCCceEEEEEeCCCCceeeeCC--CCCC------CcCCCCCCCCCCCCCCceeECCeeEE
Q 011143 77 DIVALNNFMDAQYFGEVSIGTPSQTFTVIFDTGSSNLWVPSA--KCYF------SVSCYFHSKYKSSHSSTYKRNGTSAA 148 (492)
Q Consensus 77 ~~~pl~n~~d~~Y~~~I~IGTP~Q~~~v~lDTGSs~~WV~s~--~C~~------~~~C~~~~~y~p~~SsT~~~~~~~~~ 148 (492)
..+||.|. +.+|+++|.||||||+++|++||||+++||++. .|.. ...|..++.|+|++|+||+..++.|.
T Consensus 3 ~~~~l~~~-~~~Y~~~i~iGtP~q~~~v~~DTGSs~~Wv~~~~~~C~~~~~~~~~~~C~~~~~y~~~~SsT~~~~~~~~~ 81 (334)
T 1j71_A 3 VPTTLINE-GPSYAADIVVGSNQQKQTVVIDTGSSDLWVVDTDAECQVTYSGQTNNFCKQEGTFDPSSSSSAQNLNQDFS 81 (334)
T ss_dssp EEEEEEEC-SSSEEEEEEETTTTEEEEEEEETTCCCEEEEEEEEEECCCSTTCCTTGGGSSCCBCGGGCTTCEEEEEEEE
T ss_pred eeEEEecC-CcEEEEEEEEcCCCcEEEEEEcCCCCCEEEecCCCCCcCcccccccccccCCCcCCcccCCCcccCCCceE
Confidence 45788886 789999999999999999999999999999976 6752 23788889999999999999999999
Q ss_pred EEecCCe-eEEEEEEeEeEeeeeeeecceEEEEEecccccccccccceEEeccccccccC--ccCchhhhhhhcCCCCCC
Q 011143 149 IQYGTGA-ISGFFSQDNVKVGDLVVKNQDFIEATKEASITFLAAKFDGILGLGFQEISIG--KAIPVWYNMLDQGLVKEP 225 (492)
Q Consensus 149 ~~Yg~Gs-v~G~~~~Dtv~lg~~~v~~~~Fg~a~~~~~~~~~~~~~dGILGLG~~~~s~~--~~~~~~~~L~~qg~I~~~ 225 (492)
+.|++|+ +.|.+++|+|++++.+++++.||++.... ..+||||||++..+.. ...+++++|++||+|+++
T Consensus 82 i~Yg~Gs~~~G~~~~D~v~~g~~~~~~~~fg~~~~~~-------~~~GilGLg~~~~~~~~~~~~~~~~~L~~qg~i~~~ 154 (334)
T 1j71_A 82 IEYGDLTSSQGSFYKDTVGFGGISIKNQQFADVTTTS-------VDQGIMGIGFTADEAGYNLYDNVPVTLKKQGIINKN 154 (334)
T ss_dssp EEBTTSCEEEEEEEEEEEEETTEEEEEEEEEEEEEES-------SSSCEEECSCGGGSSTTCCCCCHHHHHHHTTSCSSS
T ss_pred EEECCCCEEEEEEEEEEEEECCEEEccEEEEEEEecC-------CCccEEEEcCCcccCccccCCcHHHHHHHCCCCCcc
Confidence 9999998 68999999999999999999999998653 4689999999876542 345789999999999999
Q ss_pred eEEEEecCCCCCCCCeeEEECccCCCCcccccEEEecccccceEEEeeeEEEcCeeeeecCCCceEEEcCCcccccccHH
Q 011143 226 VFSFWLNRDIEGEEGGEIVFGGVDPDHYKGEHTYVPVTKKGYWQFEMGDVLIDGETTGYCSTGCNAIADSGTSLLAGPTT 305 (492)
Q Consensus 226 ~FSl~L~~~~~~~~~G~L~fGgiD~~~y~G~l~~~pv~~~~~w~v~l~~i~vgg~~~~~~~~~~~aiiDTGTt~i~lP~~ 305 (492)
+||+||++.. ...|+|+|||+|+++|.|++.|+|+.+..+|.|.+++|.||++.+.. +..++|||||+++++|++
T Consensus 155 ~Fs~~l~~~~--~~~G~l~fGg~d~~~~~g~l~~~p~~~~~~~~v~l~~i~v~g~~~~~---~~~~iiDSGTt~~~lP~~ 229 (334)
T 1j71_A 155 AYSLYLNSED--ASTGKIIFGGVDNAKYTGTLTALPVTSSVELRVHLGSINFDGTSVST---NADVVLDSGTTITYFSQS 229 (334)
T ss_dssp EEEEECCCTT--CSEEEEEETEEETTSEEEEEEEEECCCSSSCEEEEEEEEETTEEEEE---EEEEEECTTCSSEEECHH
T ss_pred EEEEEeCCCC--CCCeEEEEeeechHHccCceEEEEccCCCeEEEEEeEEEECCEeccC---CccEEEeCCCCcEecCHH
Confidence 9999998752 23799999999999999999999999989999999999999988752 468999999999999999
Q ss_pred HHHHHHHHhCCC
Q 011143 306 IITQINHAIGAS 317 (492)
Q Consensus 306 ~~~~l~~~i~a~ 317 (492)
++++|++++++.
T Consensus 230 ~~~~l~~~~~~~ 241 (334)
T 1j71_A 230 TADKFARIVGAT 241 (334)
T ss_dssp HHHHHHHHHTCE
T ss_pred HHHHHHHHcCCc
Confidence 999999999876
No 22
>2qzx_A Candidapepsin-5; aspartic proteinase, aspartyl protease, CL PAIR of basic residues, glycoprotein, protease, secreted; HET: STA; 2.50A {Candida albicans}
Probab=100.00 E-value=2.3e-47 Score=389.86 Aligned_cols=228 Identities=30% Similarity=0.506 Sum_probs=203.8
Q ss_pred ceEeccccCCceEEEEEEEcCCCceEEEEEeCCCCceeeeCC--CCCC------CcCCCCCCCCCCCCCCceeECCeeEE
Q 011143 77 DIVALNNFMDAQYFGEVSIGTPSQTFTVIFDTGSSNLWVPSA--KCYF------SVSCYFHSKYKSSHSSTYKRNGTSAA 148 (492)
Q Consensus 77 ~~~pl~n~~d~~Y~~~I~IGTP~Q~~~v~lDTGSs~~WV~s~--~C~~------~~~C~~~~~y~p~~SsT~~~~~~~~~ 148 (492)
..+||.| .+.+|+++|.||||||+++|++||||+++||++. .|.. ...|..++.|+|++|+||+..++.|.
T Consensus 3 v~~~l~~-~~~~Y~~~i~iGtP~q~~~v~~DTGSs~~Wv~~~~~~C~~~~~~~~~~~C~~~~~y~~~~SsT~~~~~~~~~ 81 (342)
T 2qzx_A 3 VAVTLHN-EAITYTADITVGSDNQKLNVIVDTGSSDLWIPDSNVICIPKWRGDKGDFCKSAGSYSPASSRTSQNLNTRFD 81 (342)
T ss_dssp EEEEEEE-CSSCEEEEEEETTTTEEEEEEEETTCCCEEEEEEEEEECCCSSSCCTTGGGTTCCBCGGGCTTCEEEEEEEE
T ss_pred eeEEEec-CCeEEEEEEEECCCCcEEEEEEeCCCCCeEEecCCCCccCccccCccccccCCCcCCcccCCCcccCCCcEE
Confidence 4578888 5789999999999999999999999999999976 6752 24788889999999999999999999
Q ss_pred EEecCCe-eEEEEEEeEeEeeeeeeecceEEEEEecccccccccccceEEeccccccccC--ccCchhhhhhhcCCCCCC
Q 011143 149 IQYGTGA-ISGFFSQDNVKVGDLVVKNQDFIEATKEASITFLAAKFDGILGLGFQEISIG--KAIPVWYNMLDQGLVKEP 225 (492)
Q Consensus 149 ~~Yg~Gs-v~G~~~~Dtv~lg~~~v~~~~Fg~a~~~~~~~~~~~~~dGILGLG~~~~s~~--~~~~~~~~L~~qg~I~~~ 225 (492)
+.|++|+ +.|.+++|+|++++.+++++.||++.... ..+||||||++..+.. ...+++++|++||+|+++
T Consensus 82 i~Yg~Gs~~~G~~~~D~v~~g~~~v~~~~fg~~~~~~-------~~~GilGLg~~~~~~~~~~~~~~~~~L~~qg~i~~~ 154 (342)
T 2qzx_A 82 IKYGDGSYAKGKLYKDTVGIGGVSVRDQLFANVWSTS-------ARKGILGIGFQSGEATEFDYDNLPISLRNQGIIGKA 154 (342)
T ss_dssp EECTTSCEEEEEEEEEEEEETTEEEEEEEEEEEEEEC-------SSSCEEECSCGGGCSSSSCCCCHHHHHHHTTSSSSS
T ss_pred EEeCCCCeEEEEEEEEEEEECCEEecceEEEEEEecC-------CCcCEEEEccccccCCCccCccHHHHHHHCCCcCcc
Confidence 9999998 58999999999999999999999998653 4689999999876542 345789999999999999
Q ss_pred eEEEEecCCCCCCCCeeEEECccCCCCcccccEEEecccccceEEEeeeEEEcCeeeeecCCCceEEEcCCcccccccHH
Q 011143 226 VFSFWLNRDIEGEEGGEIVFGGVDPDHYKGEHTYVPVTKKGYWQFEMGDVLIDGETTGYCSTGCNAIADSGTSLLAGPTT 305 (492)
Q Consensus 226 ~FSl~L~~~~~~~~~G~L~fGgiD~~~y~G~l~~~pv~~~~~w~v~l~~i~vgg~~~~~~~~~~~aiiDTGTt~i~lP~~ 305 (492)
+||+||++.. ...|+|+|||+|+++|.|++.|+|+.+..+|.|.+++|.||++.+.. +..++|||||+++++|++
T Consensus 155 ~Fs~~l~~~~--~~~G~l~fGg~d~~~~~g~l~~~p~~~~~~~~v~l~~i~v~g~~~~~---~~~aiiDSGTt~~~lP~~ 229 (342)
T 2qzx_A 155 AYSLYLNSAE--ASTGQIIFGGIDKAKYSGSLVDLPITSEKKLTVGLRSVNVRGRNVDA---NTNVLLDSGTTISYFTRS 229 (342)
T ss_dssp EEEEECCCTT--CSEEEEEETEEETTSBSSCCEEEECCCSSSCEEEEEEEEETTEEEEE---EEEEEECTTCSSEEECHH
T ss_pred EEEEEeCCCC--CCCeEEEECccchhhEecceEEEeccCCceEEEEEeEEEECCEecCC---CcCEEEeCCCCCEEcCHH
Confidence 9999998752 23799999999999999999999999989999999999999988752 468999999999999999
Q ss_pred HHHHHHHHhCCC
Q 011143 306 IITQINHAIGAS 317 (492)
Q Consensus 306 ~~~~l~~~i~a~ 317 (492)
++++|++++++.
T Consensus 230 ~~~~l~~~~~~~ 241 (342)
T 2qzx_A 230 IVRNILYAIGAQ 241 (342)
T ss_dssp HHHHHHHHHTCE
T ss_pred HHHHHHHHhCCe
Confidence 999999999876
No 23
>3pvk_A Candidapepsin-2; hydrolase; 1.27A {Candida albicans} SCOP: b.50.1.2 PDB: 1eag_A 3q70_A* 1zap_A* 2qzw_A 2h6t_A* 2h6s_A*
Probab=100.00 E-value=8.8e-47 Score=385.17 Aligned_cols=229 Identities=31% Similarity=0.506 Sum_probs=204.7
Q ss_pred ceEeccccCCceEEEEEEEcCCCceEEEEEeCCCCceeeeCCC--CC------CCcCCCCCCCCCCCCCCceeECCeeEE
Q 011143 77 DIVALNNFMDAQYFGEVSIGTPSQTFTVIFDTGSSNLWVPSAK--CY------FSVSCYFHSKYKSSHSSTYKRNGTSAA 148 (492)
Q Consensus 77 ~~~pl~n~~d~~Y~~~I~IGTP~Q~~~v~lDTGSs~~WV~s~~--C~------~~~~C~~~~~y~p~~SsT~~~~~~~~~ 148 (492)
..+|+.+. +.+|+++|.||||||+++|++||||+++||+++. |. ....|..++.|+|++|+||+..++.|.
T Consensus 3 v~~~l~~~-~~~Y~~~i~iGtP~q~~~v~~DTGSs~~Wv~~~~~~C~~~~~~~~~~~C~~~~~y~~~~SsT~~~~~~~~~ 81 (342)
T 3pvk_A 3 VPVTLHNE-QVTYAADITVGSNNQKLNVIVDTGSSDLWVPDVNVDCQVTYSDQTADFCKQKGTYDPSGSSASQDLNTPFK 81 (342)
T ss_dssp EEEEEEEC-SSSEEEEEEETTTTEEEEEEEETTCCCEEEEEEEEEECCCSTTCCTTGGGTTCCBCGGGCTTCEEEEEEEE
T ss_pred cceEEecC-CcEEEEEEEEcCCCcEEEEEEECCCcceEEEcCCCCCcccccccccCCCCCCCcCCCccCcceeecCCeEE
Confidence 45778775 6789999999999999999999999999999765 73 235798899999999999999999999
Q ss_pred EEecCCe-eEEEEEEeEeEeeeeeeecceEEEEEecccccccccccceEEeccccccccC-ccCchhhhhhhcCCCCCCe
Q 011143 149 IQYGTGA-ISGFFSQDNVKVGDLVVKNQDFIEATKEASITFLAAKFDGILGLGFQEISIG-KAIPVWYNMLDQGLVKEPV 226 (492)
Q Consensus 149 ~~Yg~Gs-v~G~~~~Dtv~lg~~~v~~~~Fg~a~~~~~~~~~~~~~dGILGLG~~~~s~~-~~~~~~~~L~~qg~I~~~~ 226 (492)
+.|++|+ +.|.+++|+|++++.+++++.||++.... ..+||||||++..+.. ...+++++|++||+|++++
T Consensus 82 i~Yg~gs~~~G~~~~D~v~ig~~~v~~~~fg~~~~~~-------~~~GilGLg~~~~~~~~~~~~~~~~L~~qg~i~~~~ 154 (342)
T 3pvk_A 82 IGYGDGSSSQGTLYKDTVGFGGVSIKNQVLADVDSTS-------IDQGILGVGYKTNEAGGSYDNVPVTLKKQGVIAKNA 154 (342)
T ss_dssp EECSSSCEEEEEEEEEEEEETTEEEEEEEEEEEEEES-------SSSCEEECSCGGGCSSCSSCCHHHHHHHTTSSSSSE
T ss_pred EEecCCCeEEEEEEEEEEEECCEEecceEEEEEEccC-------CCccEEEecCccccccccCCcHHHHHHhcCCCCCce
Confidence 9999998 79999999999999999999999998653 4589999999876543 3457899999999999999
Q ss_pred EEEEecCCCCCCCCeeEEECccCCCCcccccEEEecccccceEEEeeeEEEcCeeeeecCCCceEEEcCCcccccccHHH
Q 011143 227 FSFWLNRDIEGEEGGEIVFGGVDPDHYKGEHTYVPVTKKGYWQFEMGDVLIDGETTGYCSTGCNAIADSGTSLLAGPTTI 306 (492)
Q Consensus 227 FSl~L~~~~~~~~~G~L~fGgiD~~~y~G~l~~~pv~~~~~w~v~l~~i~vgg~~~~~~~~~~~aiiDTGTt~i~lP~~~ 306 (492)
||+||++.. ...|+|+|||+|+++|.|++.|+|+....+|.|.+++|.|+++.+.. .+..++|||||++++||+++
T Consensus 155 fs~~l~~~~--~~~G~l~fGg~d~~~~~g~l~~~p~~~~~~~~v~l~~i~v~g~~~~~--~~~~~iiDSGtt~~~lP~~~ 230 (342)
T 3pvk_A 155 YSLYLNSPD--AATGQIIFGGVDNAKYSGSLIALPVTSDRELRISLGSVEVSGKTINT--DNVDVLLDSGTTITYLQQDL 230 (342)
T ss_dssp EEEECCCTT--CSEEEEEETEEETTSBSSCCEEEECCCSSSCEEEEEEEEETTEEEEE--EEEEEEECTTCSSEEECHHH
T ss_pred EEEEeCCCC--CCCcEEEECccCccceeeeeEEeecCccceEEEEEeEEEECCEEecC--CCceEEEeCCCCCeecCHHH
Confidence 999998753 23799999999999999999999999989999999999999998753 34789999999999999999
Q ss_pred HHHHHHHhCCC
Q 011143 307 ITQINHAIGAS 317 (492)
Q Consensus 307 ~~~l~~~i~a~ 317 (492)
+++|++++++.
T Consensus 231 ~~~i~~~~~~~ 241 (342)
T 3pvk_A 231 ADQIIKAFNGK 241 (342)
T ss_dssp HHHHHHHTTCE
T ss_pred HHHHHHHcCCe
Confidence 99999999876
No 24
>1izd_A Aspartic proteinase; sugar binding, acid protease, hydrolase; HET: MAN; 1.90A {Aspergillus oryzae} SCOP: b.50.1.2 PDB: 1ize_A*
Probab=100.00 E-value=3.6e-46 Score=378.22 Aligned_cols=271 Identities=28% Similarity=0.433 Sum_probs=231.7
Q ss_pred EeccccCCceEEEEEEEcCCCceEEEEEeCCCCceeeeCCCCCCCcCCCCCCCCCCCCCCceeECCeeEEEEecCCe-eE
Q 011143 79 VALNNFMDAQYFGEVSIGTPSQTFTVIFDTGSSNLWVPSAKCYFSVSCYFHSKYKSSHSSTYKRNGTSAAIQYGTGA-IS 157 (492)
Q Consensus 79 ~pl~n~~d~~Y~~~I~IGTP~Q~~~v~lDTGSs~~WV~s~~C~~~~~C~~~~~y~p~~SsT~~~~~~~~~~~Yg~Gs-v~ 157 (492)
.|+. .+.+|+++|.|| ||+++|++||||+++||++..|. ...|..++.|+|++|+ ++..++.|.+.|++|+ +.
T Consensus 9 ~~~~--~~~~Y~~~i~iG--~q~~~v~~DTGSs~lWv~~~~C~-~~~c~~~~~y~~~~Ss-~~~~~~~~~i~Yg~Gs~~~ 82 (323)
T 1izd_A 9 NPTS--NDEEYITQVTVG--DDTLGLDFDTGSADLWVFSSQTP-SSERSGHDYYTPGSSA-QKIDGATWSISYGDGSSAS 82 (323)
T ss_dssp EECG--GGCCEEEEEEET--TEEEEEEEETTCCCEEECBTTSC-HHHHTTCCCBCCCTTC-EEEEEEEEEEECTTSCEEE
T ss_pred eEcC--CCCEEEEEEEEC--CEEEEEEEcCCCcceEEecCCCC-cccccCCCCCCccccC-CccCCCeEEEEcCCCCeEE
Confidence 4543 478899999999 89999999999999999999996 3467788999999999 7777899999999998 79
Q ss_pred EEEEEeEeEeeeeeeecceEEEEEecccccccccccceEEecccccccc---CccCchhhhhhhcCCCCCCeEEEEecCC
Q 011143 158 GFFSQDNVKVGDLVVKNQDFIEATKEASITFLAAKFDGILGLGFQEISI---GKAIPVWYNMLDQGLVKEPVFSFWLNRD 234 (492)
Q Consensus 158 G~~~~Dtv~lg~~~v~~~~Fg~a~~~~~~~~~~~~~dGILGLG~~~~s~---~~~~~~~~~L~~qg~I~~~~FSl~L~~~ 234 (492)
|.+++|+|++++.+++++.||++....+..+....++||||||++..+. ...++++++|++| |.+++||+||++.
T Consensus 83 G~~~~D~v~ig~~~v~~~~fg~~~~~~~~~~~~~~~~GilGLg~~~~s~~~p~~~~~~~~~l~~~--i~~~~FS~~L~~~ 160 (323)
T 1izd_A 83 GDVYKDKVTVGGVSYDSQAVESAEKVSSEFTQDTANDGLLGLAFSSINTVQPTPQKTFFDNVKSS--LSEPIFAVALKHN 160 (323)
T ss_dssp EEEEEEEEEETTEEEEEEEEEEEEEECHHHHHCTTCCEEEECSCGGGCCCBSSCCCCHHHHHGGG--SSSSEEEEECCTT
T ss_pred EEEEEEEEEECCEEECceEEEEEEeccccccccCCCceEEecCcccccccCCCCCCCHHHHHHHh--ccCcEEEEEccCC
Confidence 9999999999999999999999998765333335679999999998775 2567899999987 8899999999874
Q ss_pred CCCCCCeeEEECccCCCCcccccEEEecc-cccceEEEeeeEEEcCeeeeecCCCceEEEcCCcccccccHHHHHHHHHH
Q 011143 235 IEGEEGGEIVFGGVDPDHYKGEHTYVPVT-KKGYWQFEMGDVLIDGETTGYCSTGCNAIADSGTSLLAGPTTIITQINHA 313 (492)
Q Consensus 235 ~~~~~~G~L~fGgiD~~~y~G~l~~~pv~-~~~~w~v~l~~i~vgg~~~~~~~~~~~aiiDTGTt~i~lP~~~~~~l~~~ 313 (492)
..|+|+|||+|+++|+|++.|+|+. ..+||.|.+++|+||+ .+ +..+..+||||||+++++|++++++|+++
T Consensus 161 ----~~G~l~fGg~d~~~~~g~l~~~p~~~~~~~w~v~l~~i~v~~-~~--~~~~~~aiiDSGTs~~~lp~~~~~~i~~~ 233 (323)
T 1izd_A 161 ----APGVYDFGYTDSSKYTGSITYTDVDNSQGFWGFTADGYSIGS-DS--SSDSITGIADTGTTLLLLDDSIVDAYYEQ 233 (323)
T ss_dssp ----SCEEEEESSCCTTSEEEEEEEEECBCTTSSCEEEESEEEETT-EE--ECCCEEEEECTTCCSEEECHHHHHHHHTT
T ss_pred ----CCCEEEECCcCccccccceEEEECCCCCceEEEEECeEEECC-cc--cCCCceEEEeCCCcceeCCHHHHHHHHHh
Confidence 2799999999999999999999996 6789999999999999 44 45678999999999999999999999999
Q ss_pred hCCCcceecccccccccchhhHHHHHHhhcCcccccccccccccCCCcCcccccceeeccCCCCCCCCCCCCccchhhHH
Q 011143 314 IGASGVISQECKTLVDQYGKTILEMLIAETQPQKICSQMGLCTFDGTRGFSMGIESVIDKSSDKSSDGVHDSAMCSACEM 393 (492)
Q Consensus 314 i~a~~~~~~~C~~~~~~fg~~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 393 (492)
+.+...
T Consensus 234 i~ga~~-------------------------------------------------------------------------- 239 (323)
T 1izd_A 234 VNGASY-------------------------------------------------------------------------- 239 (323)
T ss_dssp STTCEE--------------------------------------------------------------------------
T ss_pred CCCcEE--------------------------------------------------------------------------
Confidence 853310
Q ss_pred HHHHHHHHhhhcccHHHHHHHHHhhcCCCCCCcccccccccccCCCCcEEEEECCEEEeeCccceEEEecCCcceE
Q 011143 394 AVIWMQNKLRRNETADQILNYVNQLCDRLPSPNGESAVDCDNLSSMPNVSFTIGGKVFDLAPNEVWLYADFEGSML 469 (492)
Q Consensus 394 ~~~~~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~c~~~~~~p~i~~~~~g~~~~l~~~~y~~~~~~~~~~~ 469 (492)
....+.|.++|+. .+|+|+|.|+|++++|++++|+++......|+
T Consensus 240 -----------------------------~~~~g~~~~~C~~--~~P~i~f~fgg~~~~i~~~~~~~~~~~~~~C~ 284 (323)
T 1izd_A 240 -----------------------------DSSQGGYVFPSSA--SLPDFSVTIGDYTATVPGEYISFADVGNGQTF 284 (323)
T ss_dssp -----------------------------ETTTTEEEEETTC--CCCCEEEEETTEEEEECHHHHEEEECSTTEEE
T ss_pred -----------------------------cCcCCEEEEECCC--CCceEEEEECCEEEecCHHHeEEecCCCCeEE
Confidence 1124678899984 79999999999999999999998864333333
No 25
>1ibq_A Aspergillopepsin; aspartic proteinase, hydrolase; HET: MAN; 2.14A {Aspergillus phoenicis} SCOP: b.50.1.2
Probab=100.00 E-value=8.1e-46 Score=375.91 Aligned_cols=219 Identities=32% Similarity=0.503 Sum_probs=195.1
Q ss_pred CCceEEEEEEEcCCCceEEEEEeCCCCceeeeCCCCCCCcCCCCCCCCCCCCCCceeECCeeEEEEecCCe-eEEEEEEe
Q 011143 85 MDAQYFGEVSIGTPSQTFTVIFDTGSSNLWVPSAKCYFSVSCYFHSKYKSSHSSTYKRNGTSAAIQYGTGA-ISGFFSQD 163 (492)
Q Consensus 85 ~d~~Y~~~I~IGTP~Q~~~v~lDTGSs~~WV~s~~C~~~~~C~~~~~y~p~~SsT~~~~~~~~~~~Yg~Gs-v~G~~~~D 163 (492)
.+.+|+++|+|| ||+++|++||||+++||++..|. ...|..++.|+|++|+ ++..++.|.+.|++|+ +.|.+++|
T Consensus 12 ~~~~Y~~~i~iG--~Q~~~v~~DTGSs~lWv~~~~C~-~~~c~~~~~y~~~~Ss-~~~~~~~~~i~Yg~Gs~~~G~~~~D 87 (325)
T 1ibq_A 12 NDEEYLTPVTVG--KSTLHLDFDTGSADLWVFSDELP-SSEQTGHDLYTPSSSA-TKLSGYSWDISYGDGSSASGDVYRD 87 (325)
T ss_dssp TTSCEEEEEEEB--TEEEEEEEETTCCCEEEECTTSC-HHHHTTSCCCBCCSSC-EECTTCBEEEECSSSCEEEEEEEEE
T ss_pred CCCEEEEEEEEC--CEEEEEEEeCCCccceEeeCCCC-ccccCCCCCCCchhcC-CccCCCEEEEEeCCCCEEEEEEEEe
Confidence 478999999999 89999999999999999999996 3457788999999999 7778899999999998 79999999
Q ss_pred EeEeeeeeeecceEEEEEecccccccccccceEEecccccccc---CccCchhhhhhhcCCCCCCeEEEEecCCCCCCCC
Q 011143 164 NVKVGDLVVKNQDFIEATKEASITFLAAKFDGILGLGFQEISI---GKAIPVWYNMLDQGLVKEPVFSFWLNRDIEGEEG 240 (492)
Q Consensus 164 tv~lg~~~v~~~~Fg~a~~~~~~~~~~~~~dGILGLG~~~~s~---~~~~~~~~~L~~qg~I~~~~FSl~L~~~~~~~~~ 240 (492)
+|++++.+++++.||++....+..+....++||||||++..+. ...++++++|+++ |.+++||+||.+. ..
T Consensus 88 ~v~ig~~~v~~~~fg~~~~~~~~~~~~~~~~GilGLg~~~~s~~~p~~~~~~~~~l~~~--i~~~~FS~~l~~~----~~ 161 (325)
T 1ibq_A 88 TVTVGGVTTNKQAVEAASKISSEFVQDTANDGLLGLAFSSINTVQPKAQTTFFDTVKSQ--LDSPLFAVQLKHD----AP 161 (325)
T ss_dssp EEEETTEEEEEEEEEEEEEECHHHHTSTTCCEEEECSCGGGCCCBSSCCCCHHHHHGGG--SSSSEEEEEEETT----EE
T ss_pred EEEECCEEEcceEEEEEEecCccccccCCCceEEEeCcccccccCcCCCCCHHHHHHHh--cCCcEEEEEecCC----CC
Confidence 9999999999999999998665333335779999999988765 2567899999987 8899999999874 27
Q ss_pred eeEEECccCCCCcccccEEEecc-cccceEEEeeeEEEcCeeeeecCCCceEEEcCCcccccccHHHHHHHHHHhC
Q 011143 241 GEIVFGGVDPDHYKGEHTYVPVT-KKGYWQFEMGDVLIDGETTGYCSTGCNAIADSGTSLLAGPTTIITQINHAIG 315 (492)
Q Consensus 241 G~L~fGgiD~~~y~G~l~~~pv~-~~~~w~v~l~~i~vgg~~~~~~~~~~~aiiDTGTt~i~lP~~~~~~l~~~i~ 315 (492)
|+|+|||+|+++|.|++.|+|+. ..+||.|.+++|+|+++.+ +..+..+||||||+++++|++++++|++++.
T Consensus 162 G~l~fGg~d~~~~~g~l~~~p~~~~~~~w~v~l~~i~v~~~~~--~~~~~~aiiDSGTt~~~lP~~~~~~i~~~i~ 235 (325)
T 1ibq_A 162 GVYDFGYIDDSKYTGSITYTDADSSQGYWGFSTDGYSIGDGSS--SSSGFSAIADTGTTLILLDDEIVSAYYEQVS 235 (325)
T ss_dssp EEEEESSCCGGGBSSCCEEEECBCTTSSCEEEECEEEETTSCC--BSCCEEEEECTTCCSEEECHHHHHHHHTTST
T ss_pred ceEEECCcChhhccCceEEEEcCCCCceEEEEECcEEECCeec--cCCCceEEEeCCCCcEeCCHHHHHHHHHhCC
Confidence 99999999999999999999997 5789999999999999876 3567899999999999999999999999984
No 26
>1bxo_A Protein (penicillopepsin); hydrolase, phosphonate inhibitors, macrocycle; HET: MAN PP7; 0.95A {Penicillium janthinellum} SCOP: b.50.1.2 PDB: 1apu_E* 1apv_E* 1apw_E* 1apt_E* 1bxq_A* 1ppk_E* 1ppl_E* 1ppm_E* 2wea_A* 2web_A* 2wec_A* 2wed_A* 3app_A
Probab=100.00 E-value=4.9e-46 Score=377.22 Aligned_cols=222 Identities=28% Similarity=0.475 Sum_probs=194.5
Q ss_pred EeccccCCceEEEEEEEcCCCceEEEEEeCCCCceeeeCCCCCCCcCCCCCCCCCCCCCCceeECCeeEEEEecCCe-eE
Q 011143 79 VALNNFMDAQYFGEVSIGTPSQTFTVIFDTGSSNLWVPSAKCYFSVSCYFHSKYKSSHSSTYKRNGTSAAIQYGTGA-IS 157 (492)
Q Consensus 79 ~pl~n~~d~~Y~~~I~IGTP~Q~~~v~lDTGSs~~WV~s~~C~~~~~C~~~~~y~p~~SsT~~~~~~~~~~~Yg~Gs-v~ 157 (492)
.|+. .+.+|+++|+|| ||+++|++||||+++||++..|. ...|..++.|+|++|+ ++..++.|.+.|++|+ +.
T Consensus 9 ~~~~--~~~~Y~~~i~iG--~Q~~~v~~DTGSs~lWv~~~~C~-~~~c~~~~~y~~~~Ss-~~~~~~~~~i~Yg~Gs~~~ 82 (323)
T 1bxo_A 9 TPTA--NDEEYITPVTIG--GTTLNLNFDTGSADLWVFSTELP-ASQQSGHSVYNPSATG-KELSGYTWSISYGDGSSAS 82 (323)
T ss_dssp EECG--GGSCEEEEEEET--TEEEEEEEETTCCCEEECBTTSC-HHHHTTSCCBCHHHHC-EEEEEEEEEEECTTSCEEE
T ss_pred eecC--CCCEEEEEEEEC--CEEEEEEEeCCCcceEEecCCCC-chhccCCCCCCcccCC-cccCCCeEEEEeCCCCeEE
Confidence 4443 478899999999 89999999999999999999996 3457788999999999 7778899999999998 79
Q ss_pred EEEEEeEeEeeeeeeecceEEEEEecccccccccccceEEeccccccccC---ccCchhhhhhhcCCCCCCeEEEEecCC
Q 011143 158 GFFSQDNVKVGDLVVKNQDFIEATKEASITFLAAKFDGILGLGFQEISIG---KAIPVWYNMLDQGLVKEPVFSFWLNRD 234 (492)
Q Consensus 158 G~~~~Dtv~lg~~~v~~~~Fg~a~~~~~~~~~~~~~dGILGLG~~~~s~~---~~~~~~~~L~~qg~I~~~~FSl~L~~~ 234 (492)
|.+++|+|++++.+++++.||++....+..+....++||||||++..+.. ..++++++|+++ |.+++||+||++.
T Consensus 83 G~~~~D~v~ig~~~v~~~~fg~~~~~~~~~~~~~~~~GilGLg~~~~s~~~~~~~~~~~~~l~~~--i~~~~FS~~L~~~ 160 (323)
T 1bxo_A 83 GNVFTDSVTVGGVTAHGQAVQAAQQISAQFQQDTNNDGLLGLAFSSINTVQPQSQTTFFDTVKSS--LAQPLFAVALKHQ 160 (323)
T ss_dssp EEEEEEEEEETTEEEEEEEEEEEEEECHHHHTCTTCSEEEECSCGGGCCCBSSCCCCHHHHHGGG--BSSSEEEEECCSS
T ss_pred EEEEEEEEEECCEEECcEEEEEEEecCcccccCCCCceEEEeCcccccccccCCCCCHHHHHHHh--cCCcEEEEEEeCC
Confidence 99999999999999999999999986543333356799999999887652 467899999987 8999999999874
Q ss_pred CCCCCCeeEEECccCCCCcccccEEEecc-cccceEEEeeeEEEcCeeeeecCCCceEEEcCCcccccccHHHHHHHHHH
Q 011143 235 IEGEEGGEIVFGGVDPDHYKGEHTYVPVT-KKGYWQFEMGDVLIDGETTGYCSTGCNAIADSGTSLLAGPTTIITQINHA 313 (492)
Q Consensus 235 ~~~~~~G~L~fGgiD~~~y~G~l~~~pv~-~~~~w~v~l~~i~vgg~~~~~~~~~~~aiiDTGTt~i~lP~~~~~~l~~~ 313 (492)
..|+|+|||+|+++|+|++.|+|+. ..+||.|.+++|+|++ + +..+..+||||||+++++|++++++|+++
T Consensus 161 ----~~G~l~fGg~d~~~~~g~l~~~p~~~~~~~w~v~l~~i~v~~--~--~~~~~~aiiDSGTs~~~lP~~~~~~l~~~ 232 (323)
T 1bxo_A 161 ----QPGVYDFGFIDSSKYTGSLTYTGVDNSQGFWSFNVDSYTAGS--Q--SGDGFSGIADTGTTLLLLDDSVVSQYYSQ 232 (323)
T ss_dssp ----SCEEEEESSCCGGGBSSCCEEEECBCTTSSCEEEEEEEEETT--E--EEEEEEEEECTTCSSEEECHHHHHHHHTT
T ss_pred ----CCceEEEeCcChhhccCceEEEECCCCCCeEEEEEeeEEECC--c--cCCCceEEEeCCCCceeCCHHHHHHHHHh
Confidence 2799999999999999999999996 6789999999999999 2 24567899999999999999999999999
Q ss_pred hCC
Q 011143 314 IGA 316 (492)
Q Consensus 314 i~a 316 (492)
+.+
T Consensus 233 i~~ 235 (323)
T 1bxo_A 233 VSG 235 (323)
T ss_dssp STT
T ss_pred CCC
Confidence 843
No 27
>1wkr_A Polyporopepsin; hydrolase, hydrolase-hydrolase inhibitor complex; HET: STA; 1.30A {Irpex lacteus} SCOP: b.50.1.2
Probab=100.00 E-value=2.5e-45 Score=374.47 Aligned_cols=261 Identities=26% Similarity=0.498 Sum_probs=226.7
Q ss_pred ceEeccccCCceEEEEEEEcCCCceEEEEEeCCCCceeeeCCCCCCCcCCCCCCCCCCCCCCceeECCeeEEEEecCCee
Q 011143 77 DIVALNNFMDAQYFGEVSIGTPSQTFTVIFDTGSSNLWVPSAKCYFSVSCYFHSKYKSSHSSTYKRNGTSAAIQYGTGAI 156 (492)
Q Consensus 77 ~~~pl~n~~d~~Y~~~I~IGTP~Q~~~v~lDTGSs~~WV~s~~C~~~~~C~~~~~y~p~~SsT~~~~~~~~~~~Yg~Gsv 156 (492)
..+||.|+ +.+|+++|.||||||+++|+|||||+++||+|. +.|+|++|+++ .++.|.+.|++|++
T Consensus 3 ~~~~l~n~-~~~Y~~~i~iGTP~q~~~v~~DTGSs~lWv~~~-----------~~y~~s~Ss~~--~~~~~~i~Yg~Gs~ 68 (340)
T 1wkr_A 3 GSVPATNQ-LVDYVVNVGVGSPATTYSLLVDTGSSNTWLGAD-----------KSYVKTSTSSA--TSDKVSVTYGSGSF 68 (340)
T ss_dssp EEEEEEEC-SSCEEEEEEETTTTEEEEEEEETTCCCCEECSS-----------SCCCCCTTCEE--EEEEEEEECSSCEE
T ss_pred ccEeeecc-CcEEEEEEEECCCCcEEEEEEeCCChhheecCC-----------CccCCcCCccc--cCceEEEEECCcEE
Confidence 46899997 569999999999999999999999999999742 57899888754 56899999999999
Q ss_pred EEEEEEeEeEeeeeeeecceEEEEEecccccccccccceEEecccccccc--------CccCchhhhhhhcCCCCCCeEE
Q 011143 157 SGFFSQDNVKVGDLVVKNQDFIEATKEASITFLAAKFDGILGLGFQEISI--------GKAIPVWYNMLDQGLVKEPVFS 228 (492)
Q Consensus 157 ~G~~~~Dtv~lg~~~v~~~~Fg~a~~~~~~~~~~~~~dGILGLG~~~~s~--------~~~~~~~~~L~~qg~I~~~~FS 228 (492)
.|.+++|+|++++.+++++.||++....+ + ..++||||||++..+. ...++++++|++||+|++++||
T Consensus 69 ~G~~~~Dtv~~g~~~v~~~~fg~~~~~~~--~--~~~~GilGLg~~~~s~~~~~~~~~~~~~~~~~~l~~~g~i~~~~FS 144 (340)
T 1wkr_A 69 SGTEYTDTVTLGSLTIPKQSIGVASRDSG--F--DGVDGILGVGPVDLTVGTLSPHTSTSIPTVTDNLFSQGTIPTNLLA 144 (340)
T ss_dssp EEEEEEEEEEETTEEEEEEEEEEEEEEES--C--TTCSEEEECSCGGGGTTSEESCTTCCCCCHHHHHHHTTSSSSSEEE
T ss_pred EEEEEEEEEEECCEEEcceEEEEEEccCC--C--cCCCcEEECCccccccccccccccccCCCHHHHHHHcCCCCCCEEE
Confidence 99999999999999999999999997643 2 3579999999988765 3457899999999999999999
Q ss_pred EEecCCC-CCCCCeeEEECccCCCCcccccEEEeccc----ccceEEEeeeEEEcC-eeeeecCCCceEEEcCCcccccc
Q 011143 229 FWLNRDI-EGEEGGEIVFGGVDPDHYKGEHTYVPVTK----KGYWQFEMGDVLIDG-ETTGYCSTGCNAIADSGTSLLAG 302 (492)
Q Consensus 229 l~L~~~~-~~~~~G~L~fGgiD~~~y~G~l~~~pv~~----~~~w~v~l~~i~vgg-~~~~~~~~~~~aiiDTGTt~i~l 302 (492)
+||.+.. +....|+|+|||+|+++|.|++.|+|+.+ .+||.+. ++|.|++ +.+. .+..+||||||+++++
T Consensus 145 ~~l~~~~~~~~~~G~l~fGg~d~~~~~g~l~~~p~~~~~~~~~~w~v~-~~i~v~~~~~l~---~~~~aiiDSGTt~~~l 220 (340)
T 1wkr_A 145 VSFEPTTSESSTNGELTFGATDSSKYTGSITYTPITSTSPASAYWGIN-QSIRYGSSTSIL---SSTAGIVDTGTTLTLI 220 (340)
T ss_dssp EECCCCSSSSEEEEEEEESSCCGGGCSSCCEEEECCSSTTGGGSSEEE-EEEEETTTEEEE---EEEEEEECTTBCSEEE
T ss_pred EEecCCCCCCCCCcEEEEcccChhhcccceEEEECccCCCCcceEEEE-eeEEECCCeEcc---CCCeEEEeCCcccccC
Confidence 9998742 12247999999999999999999999987 7899999 9999998 7663 2468999999999999
Q ss_pred cHHHHHHHHHHhCCCcceecccccccccchhhHHHHHHhhcCcccccccccccccCCCcCcccccceeeccCCCCCCCCC
Q 011143 303 PTTIITQINHAIGASGVISQECKTLVDQYGKTILEMLIAETQPQKICSQMGLCTFDGTRGFSMGIESVIDKSSDKSSDGV 382 (492)
Q Consensus 303 P~~~~~~l~~~i~a~~~~~~~C~~~~~~fg~~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~ 382 (492)
|++++++|.+++++..
T Consensus 221 P~~~~~~l~~~~~a~~---------------------------------------------------------------- 236 (340)
T 1wkr_A 221 ASDAFAKYKKATGAVA---------------------------------------------------------------- 236 (340)
T ss_dssp CHHHHHHHHHHHTCEE----------------------------------------------------------------
T ss_pred CHHHHHHHHHhhCCEE----------------------------------------------------------------
Confidence 9999999999998761
Q ss_pred CCCccchhhHHHHHHHHHHhhhcccHHHHHHHHHhhcCCCCCCcccccccccccCCCCcEEEEECCEEEeeCccceEEEe
Q 011143 383 HDSAMCSACEMAVIWMQNKLRRNETADQILNYVNQLCDRLPSPNGESAVDCDNLSSMPNVSFTIGGKVFDLAPNEVWLYA 462 (492)
Q Consensus 383 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~c~~~~~~p~i~~~~~g~~~~l~~~~y~~~~ 462 (492)
....+.|.++|+....+|+|+|.|+|++++|+|++|+++.
T Consensus 237 ----------------------------------------~~~~g~~~~~C~~~~~~p~i~f~f~g~~~~i~~~~yi~~~ 276 (340)
T 1wkr_A 237 ----------------------------------------DNNTGLLRLTTAQYANLQSLFFTIGGQTFELTANAQIWPR 276 (340)
T ss_dssp ----------------------------------------CTTTSSEEECHHHHHTCCCEEEEETTEEEEECTGGGBCCG
T ss_pred ----------------------------------------cCCCCeEEeeccccccCCcEEEEECCEEEEEcHHHhcccc
Confidence 1135678899998889999999999999999999999875
Q ss_pred c
Q 011143 463 D 463 (492)
Q Consensus 463 ~ 463 (492)
.
T Consensus 277 ~ 277 (340)
T 1wkr_A 277 N 277 (340)
T ss_dssp G
T ss_pred c
Confidence 4
No 28
>3lpj_A Beta-secretase 1; alzheimer'S, aspartyl protease, hydrolase; HET: TLA Z75; 1.79A {Homo sapiens} PDB: 3lpi_A* 3lpk_A* 3ohf_A* 3ohh_A* 3r2f_A* 3skf_A* 3skg_A* 4fse_A* 2hiz_A* 2p83_A* 2va7_A* 2va5_A* 2va6_A*
Probab=100.00 E-value=6.2e-46 Score=393.41 Aligned_cols=232 Identities=27% Similarity=0.430 Sum_probs=198.2
Q ss_pred eccccCCceEEEEEEEcCCCceEEEEEeCCCCceeeeCCCCCCCcCCCCCCCCCCCCCCceeECCeeEEEEecCCeeEEE
Q 011143 80 ALNNFMDAQYFGEVSIGTPSQTFTVIFDTGSSNLWVPSAKCYFSVSCYFHSKYKSSHSSTYKRNGTSAAIQYGTGAISGF 159 (492)
Q Consensus 80 pl~n~~d~~Y~~~I~IGTP~Q~~~v~lDTGSs~~WV~s~~C~~~~~C~~~~~y~p~~SsT~~~~~~~~~~~Yg~Gsv~G~ 159 (492)
+|.+..+..|+++|+||||||+|+|+|||||+++||++..| |..++.|+|++|+||+..++.|.+.|++|++.|.
T Consensus 67 ~l~~~~~~~Y~~~i~iGTP~Q~~~v~~DTGSs~lWV~~~~c-----c~~~~~y~~~~SsT~~~~~~~~~i~Yg~Gs~~G~ 141 (455)
T 3lpj_A 67 NLRGKSGQGYYVEMTVGSPPQTLNILVDTGSSNFAVGAAPH-----PFLHRYYQRQLSSTYRDLRKGVYVPYTQGKWEGE 141 (455)
T ss_dssp CEEEETTTEEEEEEEETTTTEEEEEEEETTCCCEEEECSCC-----TTCSCCCCGGGCTTCEEEEEEEEEECSSCEEEEE
T ss_pred cccCCCCCEEEEEEEECCCCeEEEEEEcCCCcceEEecccc-----cccCCcccCCCCCCcccCCccEEEEeCCeEEEEE
Confidence 45556678999999999999999999999999999999887 6678899999999999999999999999999999
Q ss_pred EEEeEeEeee-eeee-cceEEEEEecccccccccccceEEeccccccccC--ccCchhhhhhhcCCCCCCeEEEEecCCC
Q 011143 160 FSQDNVKVGD-LVVK-NQDFIEATKEASITFLAAKFDGILGLGFQEISIG--KAIPVWYNMLDQGLVKEPVFSFWLNRDI 235 (492)
Q Consensus 160 ~~~Dtv~lg~-~~v~-~~~Fg~a~~~~~~~~~~~~~dGILGLG~~~~s~~--~~~~~~~~L~~qg~I~~~~FSl~L~~~~ 235 (492)
+++|+|+|++ ..+. .+.|+++............++||||||++..+.. ...+++++|++|+.|+ ++||+||.+..
T Consensus 142 ~~~Dtv~ig~~~~~~~~~~~~~~~~~~~~~~~~~~~dGIlGLg~~~~s~~~~~~~~~~~~L~~q~~i~-~~FS~~L~~~~ 220 (455)
T 3lpj_A 142 LGTDLVSIPHGPNVTVRANIAAITESDKFFINGSNWEGILGLAYAEIARPDDSLEPFFDSLVKQTHVP-NLFSLQLCGAG 220 (455)
T ss_dssp EEEEEEECTTSCSCEEEEEEEEEEEEESCSCTTCCCCEEEECSCGGGCSSCTTSCCHHHHHHHHSCCC-SCEEEEECCCS
T ss_pred EEEEEEEECCCcceeeEEEEEEEEccCcccccCCCcceEEEeCccccccccCCCCcHHHHHHHccCCC-ceeEEEecccc
Confidence 9999999984 2332 2567777654432222357799999999988764 3788999999999997 99999997631
Q ss_pred C--------CCCCeeEEECccCCCCcccccEEEecccccceEEEeeeEEEcCeeeeecC---CCceEEEcCCcccccccH
Q 011143 236 E--------GEEGGEIVFGGVDPDHYKGEHTYVPVTKKGYWQFEMGDVLIDGETTGYCS---TGCNAIADSGTSLLAGPT 304 (492)
Q Consensus 236 ~--------~~~~G~L~fGgiD~~~y~G~l~~~pv~~~~~w~v~l~~i~vgg~~~~~~~---~~~~aiiDTGTt~i~lP~ 304 (492)
. ....|+|+|||+|+++|.|++.|+|+.+.+||.|.+++|.||++.+.+.. ....+||||||+++++|.
T Consensus 221 ~~~~~~~~~~~~~G~l~fGg~d~~~~~g~l~~~p~~~~~~w~v~l~~i~v~g~~~~~~~~~~~~~~aiiDSGTt~~~lP~ 300 (455)
T 3lpj_A 221 FPLNQSEVLASVGGSMIIGGIDHSLYTGSLWYTPIRREWYYEVIIVRVEINGQDLKMDCKEYNYDKSIVDSGTTNLRLPK 300 (455)
T ss_dssp SCCCHHHHHHSCCEEEEETSCCGGGEEEEEEEEECCSBTTBBCCEEEEEETTEECCCCGGGGGSSCEEECTTSSSEEEEH
T ss_pred ccccccccccCCCceEEECCcCcccccCceEEEecCCCceeEEEEeEEEECCEEccccccccCCCeEEEECCCcceeCCH
Confidence 1 22479999999999999999999999999999999999999999876422 256799999999999999
Q ss_pred HHHHHHHHHhCCC
Q 011143 305 TIITQINHAIGAS 317 (492)
Q Consensus 305 ~~~~~l~~~i~a~ 317 (492)
+++++|++++++.
T Consensus 301 ~~~~~i~~~i~~~ 313 (455)
T 3lpj_A 301 KVFEAAVKSIKAA 313 (455)
T ss_dssp HHHHHHHHHHHHH
T ss_pred HHHHHHHHHhhhh
Confidence 9999999999876
No 29
>2ewy_A Beta-secretase 2; BACE2, aspartic protease, hydrolase; HET: DBO; 3.10A {Homo sapiens}
Probab=100.00 E-value=6.2e-45 Score=377.30 Aligned_cols=233 Identities=27% Similarity=0.470 Sum_probs=195.8
Q ss_pred EeccccCCceEEEEEEEcCCCceEEEEEeCCCCceeeeCCCCCCCcCCCCCCCCCCCCCCceeECCeeEEEEecCCeeEE
Q 011143 79 VALNNFMDAQYFGEVSIGTPSQTFTVIFDTGSSNLWVPSAKCYFSVSCYFHSKYKSSHSSTYKRNGTSAAIQYGTGAISG 158 (492)
Q Consensus 79 ~pl~n~~d~~Y~~~I~IGTP~Q~~~v~lDTGSs~~WV~s~~C~~~~~C~~~~~y~p~~SsT~~~~~~~~~~~Yg~Gsv~G 158 (492)
.+|.+..+..|+++|+||||||+++|+|||||+++||++..|. .| ++.|+|++|+||+..++.|.+.|++|++.|
T Consensus 5 ~~l~~~~~~~Y~~~i~iGTP~q~~~v~~DTGSs~lWv~~~~c~---~~--~~~f~~~~SsT~~~~~~~~~i~Yg~Gs~~G 79 (383)
T 2ewy_A 5 DNLQGDSGRGYYLEMLIGTPPQKLQILVDTGSSNFAVAGTPHS---YI--DTYFDTERSSTYRSKGFDVTVKYTQGSWTG 79 (383)
T ss_dssp TCEEEETTTEEEEEEEETTTTEEEEEEEETTCCCEEEECSCBT---TB--SCCCCGGGCTTCEEEEEEEEEECSSCEEEE
T ss_pred eeccCCCCCcEEEEEEecCCCceEEEEEecCCCceEEecCCCC---cc--ccCcccccCccceeCCceEEEEECCcEEEE
Confidence 3677777889999999999999999999999999999998884 34 578999999999999999999999999999
Q ss_pred EEEEeEeEeeeeeee--cceEEEEEecccccccccccceEEecccccccc--CccCchhhhhhhcCCCCCCeEEEEecCC
Q 011143 159 FFSQDNVKVGDLVVK--NQDFIEATKEASITFLAAKFDGILGLGFQEISI--GKAIPVWYNMLDQGLVKEPVFSFWLNRD 234 (492)
Q Consensus 159 ~~~~Dtv~lg~~~v~--~~~Fg~a~~~~~~~~~~~~~dGILGLG~~~~s~--~~~~~~~~~L~~qg~I~~~~FSl~L~~~ 234 (492)
.+++|+|++++.... .+.|++.....+.......++||||||++..+. ....+++++|++|+.| +++||+||++.
T Consensus 80 ~~~~Dtv~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~dGilGLg~~~~s~~~~~~~~~~~~l~~q~~i-~~~FS~~l~~~ 158 (383)
T 2ewy_A 80 FVGEDLVTIPKGFNTSFLVNIATIFESENFFLPGIKWNGILGLAYATLAKPSSSLETFFDSLVTQANI-PNVFSMQMCGA 158 (383)
T ss_dssp EEEEEEEEETTTEEEEEEEEEEEEEEEESCSCTTCCCCEEEECSCGGGCSSCTTSCCHHHHHHHHHTC-CSCEEEEECCC
T ss_pred EEEEEEEEECCCccceeEEEEEEEEeecceeeccCcCceEEecCchhcccccccccCHHHHHHHccCC-CcceEEEeecc
Confidence 999999999853222 245676654332211234679999999998765 4577899999999999 79999999752
Q ss_pred -----CCCCCCeeEEECccCCCCcccccEEEecccccceEEEeeeEEEcCeeeeecCC---CceEEEcCCcccccccHHH
Q 011143 235 -----IEGEEGGEIVFGGVDPDHYKGEHTYVPVTKKGYWQFEMGDVLIDGETTGYCST---GCNAIADSGTSLLAGPTTI 306 (492)
Q Consensus 235 -----~~~~~~G~L~fGgiD~~~y~G~l~~~pv~~~~~w~v~l~~i~vgg~~~~~~~~---~~~aiiDTGTt~i~lP~~~ 306 (492)
......|+|+|||+|+++|.|++.|+|+.+.+||.|.+++|+||++.+.+... ...+||||||+++++|+++
T Consensus 159 ~~~~~~~~~~~G~l~fGg~d~~~~~g~l~~~p~~~~~~~~v~l~~i~v~g~~~~~~~~~~~~~~aiiDSGTt~~~lP~~~ 238 (383)
T 2ewy_A 159 GLPVAGSGTNGGSLVLGGIEPSLYKGDIWYTPIKEEWYYQIEILKLEIGGQSLNLDCREYNADKAIVDSGTTLLRLPQKV 238 (383)
T ss_dssp ---------CCEEEEETSCCGGGCCSCEEEEECSSBTTBBCCEEEEEETTEECCCCTTTTTSSCEEECTTCSSEEEEHHH
T ss_pred ccccccCCCCCeEEEeCccchhhccCccEEEecCCCceEEEEEEEEEECCEEccccccccCCccEEEEcCCccccCCHHH
Confidence 11234799999999999999999999999999999999999999988754322 4689999999999999999
Q ss_pred HHHHHHHhCCC
Q 011143 307 ITQINHAIGAS 317 (492)
Q Consensus 307 ~~~l~~~i~a~ 317 (492)
+++|++++++.
T Consensus 239 ~~~l~~~i~~~ 249 (383)
T 2ewy_A 239 FDAVVEAVARA 249 (383)
T ss_dssp HHHHHHHHHHT
T ss_pred HHHHHHHHhhh
Confidence 99999999876
No 30
>3vf3_A Beta-secretase 1; structure-based drug design, hydrolase-hydrolase inhibitor C; HET: 0GS; 1.48A {Homo sapiens} PDB: 2f3e_A* 2f3f_A* 1ym2_A* 3dv1_A* 3dv5_A* 3k5c_A* 3k5f_A* 3k5g_A* 3pi5_A* 3qbh_A* 3duy_A* 3veu_A* 3vg1_A* 4d83_A* 4d88_A* 4d89_A* 4d8c_A* 3msk_A* 3k5d_A* 1ym4_A* ...
Probab=100.00 E-value=2.3e-44 Score=375.42 Aligned_cols=231 Identities=27% Similarity=0.437 Sum_probs=194.2
Q ss_pred ccccCCceEEEEEEEcCCCceEEEEEeCCCCceeeeCCCCCCCcCCCCCCCCCCCCCCceeECCeeEEEEecCCeeEEEE
Q 011143 81 LNNFMDAQYFGEVSIGTPSQTFTVIFDTGSSNLWVPSAKCYFSVSCYFHSKYKSSHSSTYKRNGTSAAIQYGTGAISGFF 160 (492)
Q Consensus 81 l~n~~d~~Y~~~I~IGTP~Q~~~v~lDTGSs~~WV~s~~C~~~~~C~~~~~y~p~~SsT~~~~~~~~~~~Yg~Gsv~G~~ 160 (492)
|.+..+..|+++|+||||||+++|+|||||+++||++..| |..++.|+|++|+||+..++.|.+.|++|++.|.+
T Consensus 22 l~~~~~~~Y~~~i~iGTP~q~~~v~~DTGSs~lWv~~~~c-----~~~~~~y~~~~SsT~~~~~~~~~i~Yg~Gs~~G~~ 96 (402)
T 3vf3_A 22 LRGKSGQGYYVEMTVGSPPQTLNILVDTGSSNFAVGAAPH-----PFLHRYYQRQLSSTYRDLRKGVYVPYTQGKWEGEL 96 (402)
T ss_dssp EEEETTTEEEEEEEETTTTEEEEEEEETTCCCEEEECSCC-----TTCSCCCCGGGCTTCEEEEEEEEEECSSCEEEEEE
T ss_pred ccCCCCCEEEEEEEECCCCeEEEEEEeCCCCceEEccCCC-----CcccCCcCcccCcccccCCCEEEEEECcEEEEEEE
Confidence 3334467899999999999999999999999999999887 56678999999999999999999999999999999
Q ss_pred EEeEeEee-eeeeecc-eEEEEEecccccccccccceEEeccccccccCc--cCchhhhhhhcCCCCCCeEEEEecCCC-
Q 011143 161 SQDNVKVG-DLVVKNQ-DFIEATKEASITFLAAKFDGILGLGFQEISIGK--AIPVWYNMLDQGLVKEPVFSFWLNRDI- 235 (492)
Q Consensus 161 ~~Dtv~lg-~~~v~~~-~Fg~a~~~~~~~~~~~~~dGILGLG~~~~s~~~--~~~~~~~L~~qg~I~~~~FSl~L~~~~- 235 (492)
++|+|+++ +..+..+ .|+++............++||||||++..+... .++++++|++|+.|+ ++||+||++..
T Consensus 97 ~~D~v~ig~~~~~~~~~~~~~~~~~~~~~~~~~~~dGIlGLg~~~~s~~~~~~~~~~~~L~~q~~i~-~~FS~~l~~~~~ 175 (402)
T 3vf3_A 97 GTDLVSIPHGPNVTVRANIAAITESDKFFINGSNWEGILGLAYAEIARPDDSLEPFFDSLVKQTHVP-NLFSLQLCGAGF 175 (402)
T ss_dssp EEEEEECTTSCSCEEEEEEEEEEEEESCSCTTCCCCEEEECSCGGGCSSCTTSCCHHHHHHHHSCCC-SCEEEEECCCC-
T ss_pred EEEEEEECCccccceeeeEEEEEccccccccCCCccceEEcCchhhcccCCcCCcHHHHHHHccCCc-cceEEEeecccc
Confidence 99999998 4444433 366665443322224567999999999887643 788999999999997 99999997531
Q ss_pred ----C---CCCCeeEEECccCCCCcccccEEEecccccceEEEeeeEEEcCeeeeecC---CCceEEEcCCcccccccHH
Q 011143 236 ----E---GEEGGEIVFGGVDPDHYKGEHTYVPVTKKGYWQFEMGDVLIDGETTGYCS---TGCNAIADSGTSLLAGPTT 305 (492)
Q Consensus 236 ----~---~~~~G~L~fGgiD~~~y~G~l~~~pv~~~~~w~v~l~~i~vgg~~~~~~~---~~~~aiiDTGTt~i~lP~~ 305 (492)
. ....|+|+|||+|+++|.|++.|+|+.+.+||.|.+++|.|+++.+.+.. ....++|||||+++++|.+
T Consensus 176 ~~~~~~~~~~~~G~l~fGg~d~~~~~g~l~~~p~~~~~~w~v~l~~i~v~g~~~~~~~~~~~~~~aiiDSGTt~~~lP~~ 255 (402)
T 3vf3_A 176 PLNQSEVLASVGGSMIIGGIDHSLYTGSLWYTPIRREWYYEVIIVRVEINGQDLKMDCKEYNYDKSIVDSGTTNLRLPKK 255 (402)
T ss_dssp ------------EEEEESSCCGGGEEEEEEEEECSSBTTBEECEEEEEETTEECCCCGGGGGSSCEEECTTCCSEEEEHH
T ss_pred cccccccccCCCCEEEeCCcCcccccCceEEEeCCcCcEEEEEEeEEEECCEEecccccccCCCeEEEECCCCcccCCHH
Confidence 0 23479999999999999999999999999999999999999999876422 2567999999999999999
Q ss_pred HHHHHHHHhCCC
Q 011143 306 IITQINHAIGAS 317 (492)
Q Consensus 306 ~~~~l~~~i~a~ 317 (492)
++++|++++++.
T Consensus 256 ~~~~i~~~i~~~ 267 (402)
T 3vf3_A 256 VFEAAVKSIKAA 267 (402)
T ss_dssp HHHHHHHHHHHH
T ss_pred HHHHHHHHHhhh
Confidence 999999999876
No 31
>2qp8_A Beta-secretase 1; BACE1, protease, alternative splicing, aspartyl protease, glycoprotein, hydrolase, membrane, transmembrane, zymogen; HET: TAR SC7; 1.50A {Homo sapiens} SCOP: b.50.1.2 PDB: 2qk5_A* 2qmf_A* 2qmg_A* 2qmd_A* 4djx_A* 3l59_A* 3l5b_A* 3l5c_A* 3l58_A* 3l5d_A* 3l5f_A* 4dju_A* 4djv_A* 4djw_A* 3l5e_A* 4djy_A* 2zhv_A 2zhs_A 2zhr_A 2zhu_A ...
Probab=100.00 E-value=5.1e-44 Score=372.08 Aligned_cols=231 Identities=28% Similarity=0.427 Sum_probs=195.2
Q ss_pred eccccCCceEEEEEEEcCCCceEEEEEeCCCCceeeeCCCCCCCcCCCCCCCCCCCCCCceeECCeeEEEEecCCeeEEE
Q 011143 80 ALNNFMDAQYFGEVSIGTPSQTFTVIFDTGSSNLWVPSAKCYFSVSCYFHSKYKSSHSSTYKRNGTSAAIQYGTGAISGF 159 (492)
Q Consensus 80 pl~n~~d~~Y~~~I~IGTP~Q~~~v~lDTGSs~~WV~s~~C~~~~~C~~~~~y~p~~SsT~~~~~~~~~~~Yg~Gsv~G~ 159 (492)
+|.+..+.+|+++|.||||||+++|+|||||+++||++..|. .| ++.|+|++|+||+..++.|.+.|++|++.|.
T Consensus 14 ~l~~~~~~~Y~~~i~iGTP~Q~~~v~~DTGSs~lWv~~~~c~---~~--~~~y~~~~SsT~~~~~~~~~i~Yg~Gs~~G~ 88 (395)
T 2qp8_A 14 NLRGKSGQGYYVEMTVGSPPQTLNILVDTGSSNFAVGAAPHP---FL--HRYYQRQLSSTYRDLRKGVYVPYTQGKWEGE 88 (395)
T ss_dssp CEEEETTTEEEEEEEETTTTEEEEEEEETTCCCEEEECSCCT---TC--SCCCCGGGCTTCEEEEEEEEEECSSCEEEEE
T ss_pred ecCCCCCceEEEEEEecCCCceEEEEEecCCCceEEECCCCc---cc--cCCcCcccCCCceeCCceEEEEECCcEEEEE
Confidence 455666789999999999999999999999999999998884 23 6889999999999999999999999999999
Q ss_pred EEEeEeEee-eeeeec-ceEEEEEeccccccc-ccccceEEeccccccccC--ccCchhhhhhhcCCCCCCeEEEEecCC
Q 011143 160 FSQDNVKVG-DLVVKN-QDFIEATKEASITFL-AAKFDGILGLGFQEISIG--KAIPVWYNMLDQGLVKEPVFSFWLNRD 234 (492)
Q Consensus 160 ~~~Dtv~lg-~~~v~~-~~Fg~a~~~~~~~~~-~~~~dGILGLG~~~~s~~--~~~~~~~~L~~qg~I~~~~FSl~L~~~ 234 (492)
+++|+|+++ +..++. +.|++...... .|. ...++||||||++..+.. ...+++++|++|+.|+ ++||+||++.
T Consensus 89 ~~~Dtv~ig~g~~~~~~~~~~~~~~~~~-~f~~~~~~dGIlGLg~~~~s~~~~~~~~~~~~l~~q~~i~-~~FS~~L~~~ 166 (395)
T 2qp8_A 89 LGTDLVSIPHGPNVTVRANIAAITESDK-FFINGSNWEGILGLAYAEIARPDDSLEPFFDSLVKQTHVP-NLFSLQLCGA 166 (395)
T ss_dssp EEEEEEECTTSCSCEEEEEEEEEEEEES-CSCTTCCCCEEEECSCGGGCSSCTTSCCHHHHHHHHSCCC-SCEEEEECCC
T ss_pred EEeEEEEECCCCCceEEEEEEEEEccCc-ccccccCccceEEcCchhhccCCCCCCCHHHHHHHccCCc-ceEEEEeccc
Confidence 999999998 554442 45666654332 222 356799999999887653 4678999999999997 8999999863
Q ss_pred CC--------CCCCeeEEECccCCCCcccccEEEecccccceEEEeeeEEEcCeeeeecC---CCceEEEcCCccccccc
Q 011143 235 IE--------GEEGGEIVFGGVDPDHYKGEHTYVPVTKKGYWQFEMGDVLIDGETTGYCS---TGCNAIADSGTSLLAGP 303 (492)
Q Consensus 235 ~~--------~~~~G~L~fGgiD~~~y~G~l~~~pv~~~~~w~v~l~~i~vgg~~~~~~~---~~~~aiiDTGTt~i~lP 303 (492)
.- ....|+|+|||+|+++|.|++.|+|+.+.+||.|.+++|.||++.+.+.. ....+||||||+++++|
T Consensus 167 ~~~~~~~~~~~~~~G~l~fGg~d~~~~~g~l~~~p~~~~~~~~v~l~~i~v~g~~~~~~~~~~~~~~aiiDSGTt~~~lP 246 (395)
T 2qp8_A 167 GFPLNQSEVLASVGGSMIIGGIDHSLYTGSLWYTPIRREWYYEVIIVRVEINGQDLKMDCKEYNYDKSIVDSGTTNLRLP 246 (395)
T ss_dssp SSCCCHHHHHHSCCEEEEETSCCGGGEEEEEEEEECCSBTTBBCCEEEEEETTEECCCCGGGGGSSCEEECTTCCSEEEE
T ss_pred cccccccccccCCCcEEEECCcCcccccCceEEeccCCCceEEEEEEEEEECCEEcccCccccCCceEEEEcCCCcEecC
Confidence 10 12479999999999999999999999999999999999999998875422 24679999999999999
Q ss_pred HHHHHHHHHHhCCC
Q 011143 304 TTIITQINHAIGAS 317 (492)
Q Consensus 304 ~~~~~~l~~~i~a~ 317 (492)
++++++|++++++.
T Consensus 247 ~~~~~~l~~~i~~~ 260 (395)
T 2qp8_A 247 KKVFEAAVKSIKAA 260 (395)
T ss_dssp HHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhhh
Confidence 99999999999875
No 32
>3aup_A SBG7S, BG, basic 7S globulin; pepsin-like fold, plant protein; 1.91A {Glycine max}
Probab=100.00 E-value=5e-43 Score=365.55 Aligned_cols=229 Identities=17% Similarity=0.248 Sum_probs=186.6
Q ss_pred ceEecc-ccCCceEEEEEEEcCCCceEEEEEeCCCCceeeeCC-----------CCCCCcCCCCCCCC------CCCCCC
Q 011143 77 DIVALN-NFMDAQYFGEVSIGTPSQTFTVIFDTGSSNLWVPSA-----------KCYFSVSCYFHSKY------KSSHSS 138 (492)
Q Consensus 77 ~~~pl~-n~~d~~Y~~~I~IGTP~Q~~~v~lDTGSs~~WV~s~-----------~C~~~~~C~~~~~y------~p~~Ss 138 (492)
..+||. |+.+.+|+++|.||||||++.|+|||||+++||+|. .|. +..|..++.| ++..|+
T Consensus 10 ~~~pl~~~~~~~~Y~~~i~iGTP~Q~~~v~~DTGSs~lWv~~~~~~~Sst~~~~~C~-s~~C~~~~~~~c~~c~~~~~s~ 88 (403)
T 3aup_A 10 VVLPVQNDGSTGLHWANLQKRTPLMQVPVLVDLNGNHLWVNCEQQYSSKTYQAPFCH-STQCSRANTHQCLSCPAASRPG 88 (403)
T ss_dssp EEEEEEECTTTCCEEEEEEETTTTEEEEEEEETTCSSEEEECSSCCCCSSCBCCCTT-BHHHHHTTCCCEEECSSSCBTT
T ss_pred EEEeeecCCCCceEEEEEECCCCCceeEEEEECCCCceeECCCCCCCCCCCCccCCC-CccccCccccCccccCCCCCCC
Confidence 468999 888999999999999999999999999999999999 553 3457777777 555443
Q ss_pred ceeECCeeEEEEec-CC-eeEEEEEEeEeEeee-----------eeeecceEEEEEecccccccccccceEEeccccccc
Q 011143 139 TYKRNGTSAAIQYG-TG-AISGFFSQDNVKVGD-----------LVVKNQDFIEATKEASITFLAAKFDGILGLGFQEIS 205 (492)
Q Consensus 139 T~~~~~~~~~~~Yg-~G-sv~G~~~~Dtv~lg~-----------~~v~~~~Fg~a~~~~~~~~~~~~~dGILGLG~~~~s 205 (492)
+....+.|.+.|+ +| ++.|.+++|+|++++ ..++++.||++.......+....++||||||++..+
T Consensus 89 -~~~~~~~~~~~Y~~d~~~~~G~~~~Dtv~ig~~~g~~~~~~~~~~v~~~~Fg~~~~~~~~~~~~~~~dGIlGLg~~~~s 167 (403)
T 3aup_A 89 -CHKNTCGLMSTNPITQQTGLGELGEDVLAIHATQGSTQQLGPLVTVPQFLFSCAPSFLVQKGLPRNTQGVAGLGHAPIS 167 (403)
T ss_dssp -BCSSEEEEEEEETTTTEEEEEEEEEEEEEEEECCC----CCCEEEEEEEEEEEECGGGGSSSSSTTCCEEEECSSSTTS
T ss_pred -CCCCcceeEeecCCCCceeeEEEEEEEEEecccCCccccccccccccCEEEECCcccccccCCCCCCceEEECCCCCcC
Confidence 4456789999998 55 479999999999998 889999999998764321334578999999998765
Q ss_pred cCccCchhhhhhhcCCCCCCeEEEEecCCCCCCCCeeEEECccCCCCc--c-c-----ccEEEecccc--cceEEEeeeE
Q 011143 206 IGKAIPVWYNMLDQGLVKEPVFSFWLNRDIEGEEGGEIVFGGVDPDHY--K-G-----EHTYVPVTKK--GYWQFEMGDV 275 (492)
Q Consensus 206 ~~~~~~~~~~L~~qg~I~~~~FSl~L~~~~~~~~~G~L~fGgiD~~~y--~-G-----~l~~~pv~~~--~~w~v~l~~i 275 (492)
+..+| +++.+.+++||+||.+.. ...|+|+||| |+++| . | ++.|+|+... +||.|.+++|
T Consensus 168 ------~~~ql-~~~~~~~~~FS~~L~~~~--~~~G~l~fGg-d~~~~~~~~G~~~~~~l~~~Pl~~~~~~~y~v~l~~i 237 (403)
T 3aup_A 168 ------LPNQL-ASHFGLQRQFTTCLSRYP--TSKGAIIFGD-APNNMRQFQNQDIFHDLAFTPLTITLQGEYNVRVNSI 237 (403)
T ss_dssp ------HHHHH-HHHHTCCSEEEEECCSCT--TSCEEEEESC-HHHHC--CTTCCTTTTEEEEECEECTTSCEEECEEEE
T ss_pred ------HHHHH-HhhcCCCCeEEEEcCCCC--CCCeeEEECC-CchhccccccccccCceeecccccCCCCcceEEEEEE
Confidence 45556 455677899999998752 2389999999 99888 5 6 9999999876 8999999999
Q ss_pred EEcCeee-eecCC--------CceEEEcCCcccccccHHHHHHHHHHhCCC
Q 011143 276 LIDGETT-GYCST--------GCNAIADSGTSLLAGPTTIITQINHAIGAS 317 (492)
Q Consensus 276 ~vgg~~~-~~~~~--------~~~aiiDTGTt~i~lP~~~~~~l~~~i~a~ 317 (492)
.||++.+ ..... ...+||||||++++||++++++|++++.+.
T Consensus 238 ~v~g~~~~~~~~~~~~~~~~g~~~aiiDSGTt~~~lp~~~~~~l~~~i~~~ 288 (403)
T 3aup_A 238 RINQHSVFPLNKISSTIVGSTSGGTMISTSTPHMVLQQSVYQAFTQVFAQQ 288 (403)
T ss_dssp EETTEEEECC------------CCEEECSSCSSEEECHHHHHHHHHHHHHT
T ss_pred EECCEEcccCChhHeeeccCCCCCEEEECCCccEEeCHHHHHHHHHHHHHH
Confidence 9999887 43221 234999999999999999999999999543
No 33
>3vla_A EDGP; extracellular, inhibitor, plant protein; HET: NAG; 0.95A {Daucus carota} PDB: 3vlb_A
Probab=100.00 E-value=5.6e-43 Score=366.02 Aligned_cols=231 Identities=17% Similarity=0.194 Sum_probs=189.2
Q ss_pred ceEeccc-cCCceEEEEEEEcCCCceEEEEEeCCCCceeeeCCCCC----------CCcCCCCCCCCCCCC-----CCce
Q 011143 77 DIVALNN-FMDAQYFGEVSIGTPSQTFTVIFDTGSSNLWVPSAKCY----------FSVSCYFHSKYKSSH-----SSTY 140 (492)
Q Consensus 77 ~~~pl~n-~~d~~Y~~~I~IGTP~Q~~~v~lDTGSs~~WV~s~~C~----------~~~~C~~~~~y~p~~-----SsT~ 140 (492)
..+|++. ..+.+|+++|.||||||+|.|++||||+++||+|..|. .+..|..++.|++.. ++++
T Consensus 9 ~~~pv~~d~~~~~Y~~~i~iGTPpq~~~v~~DTGS~~lWv~c~~c~~Sst~~~v~C~s~~C~~~~~~~~~~c~s~~~~~c 88 (413)
T 3vla_A 9 LVVPVKKDASTLQYVTTINQRTPLVSENLVVDLGGRFLWVDCDQNYVSSTYRPVRCRTSQCSLSGSIACGDCFNGPRPGC 88 (413)
T ss_dssp EEEEEEECTTTCCEEEEEEETTTTEEEEEEEETTCSSEEEECSSSCCCTTCEECBTTSHHHHHTTCCEEECCSSCCBTTB
T ss_pred EEEEeeecCCCCeEEEEEEcCCCCcceEEEEeCCChhhhcccCCCCCCCCcCccCCCcccccccccCCCcccccCCCCCC
Confidence 4567764 45789999999999999999999999999999996542 144677777787642 3455
Q ss_pred eECCeeEEEEec-CCe-eEEEEEEeEeEee---------eeeeecceEEEEEecccccccccccceEEeccccccccCcc
Q 011143 141 KRNGTSAAIQYG-TGA-ISGFFSQDNVKVG---------DLVVKNQDFIEATKEASITFLAAKFDGILGLGFQEISIGKA 209 (492)
Q Consensus 141 ~~~~~~~~~~Yg-~Gs-v~G~~~~Dtv~lg---------~~~v~~~~Fg~a~~~~~~~~~~~~~dGILGLG~~~~s~~~~ 209 (492)
....|.|.+.|+ +|+ +.|.+++|+|+++ +..++++.|||+....... ....++||||||++.++
T Consensus 89 ~~~~c~~~i~Y~~d~~~~~G~l~~Dtv~l~~~~g~~~~~~~~v~~~~FGc~~~~~~~g-~~~~~dGIlGLg~~~lS---- 163 (413)
T 3vla_A 89 NNNTCGVFPENPVINTATGGEVAEDVVSVESTDGSSSGRVVTVPRFIFSCAPTSLLQN-LASGVVGMAGLGRTRIA---- 163 (413)
T ss_dssp CSSEEEECCEETTTTEECCEEEEEEEEEEEEECSSBEEEEEEEEEEEEEEECGGGGTT-SCTTCCEEEECSSSSSS----
T ss_pred CCCcCcceeecCcCCceeeeEEEEEEEEecccCCCCcccceeeCCEEEECcccccccC-cccccccccccCCCCcc----
Confidence 666789999995 654 7899999999997 3688899999998753221 23568999999998876
Q ss_pred CchhhhhhhcCCCCCCeEEEEecCCCCCCCCeeEEECccCCCC-----cccc-cEEEecccc--------------cceE
Q 011143 210 IPVWYNMLDQGLVKEPVFSFWLNRDIEGEEGGEIVFGGVDPDH-----YKGE-HTYVPVTKK--------------GYWQ 269 (492)
Q Consensus 210 ~~~~~~L~~qg~I~~~~FSl~L~~~~~~~~~G~L~fGgiD~~~-----y~G~-l~~~pv~~~--------------~~w~ 269 (492)
+..+|.+++.| +++||+||.+.. ..+|+|+|||+|..+ |.|+ +.|+|+..+ .||.
T Consensus 164 --l~sql~~~~~i-~~~FS~cL~~~~--~~~G~l~fGg~~~~~~p~~~~~g~~l~~tPl~~~~~~~~~~~~~~~~~~~y~ 238 (413)
T 3vla_A 164 --LPSQFASAFSF-KRKFAMCLSGST--SSNSVIIFGNDPYTFLPNIIVSDKTLTYTPLLTNPVSTSATSTQGEPSVEYF 238 (413)
T ss_dssp --HHHHHHHHHTC-CSEEEEECCSCS--SSCEEEEEESCCEEETTTEEECTTTSEEEECBCCSSCCSSSCCTTCCCCSCE
T ss_pred --hHHHHhhhcCC-CceEEEeCCCCC--CCceEEEECCCcccccccccccCCceeEeecccCCccccccccccCCCceEE
Confidence 67789999988 899999998852 247999999998753 7888 999999765 7999
Q ss_pred EEeeeEEEcCeeeeecC--------CCceEEEcCCcccccccHHHHHHHHHHhCCC
Q 011143 270 FEMGDVLIDGETTGYCS--------TGCNAIADSGTSLLAGPTTIITQINHAIGAS 317 (492)
Q Consensus 270 v~l~~i~vgg~~~~~~~--------~~~~aiiDTGTt~i~lP~~~~~~l~~~i~a~ 317 (492)
|.+++|+||++.+..+. +.+.+||||||++++||++++++|.++|++.
T Consensus 239 V~l~~IsVgg~~l~~~~~~~~~~~~g~~~aIiDSGTslt~lp~~~y~~l~~a~~~~ 294 (413)
T 3vla_A 239 IGVKSIKINSKIVALNTSLLSISSAGLGGTKISTINPYTVLETSIYKAVTEAFIKE 294 (413)
T ss_dssp ECCCEEEETTEEECCCGGGTSBCTTSCBCEEECSSSSSEEEEHHHHHHHHHHHHHH
T ss_pred EEEEEEEECCEEccCCchhcccccCCCCCEEEECCCCcEEcCHHHHHHHHHHHHHH
Confidence 99999999999886432 3578999999999999999999999999765
No 34
>1t6e_X Xylanase inhibitor; two beta-barrel domain structure, hydrolase inhibitor; 1.70A {Triticum aestivum} SCOP: b.50.1.2 PDB: 1t6g_A 2b42_A 3hd8_A
Probab=100.00 E-value=8.1e-40 Score=338.87 Aligned_cols=222 Identities=12% Similarity=0.148 Sum_probs=175.5
Q ss_pred eEecc-ccCCceEEEEEEEcCCCceEEEEEeCCCCceeeeCCCCC-------CCcCCCCCCCCCCCCCCcee-------E
Q 011143 78 IVALN-NFMDAQYFGEVSIGTPSQTFTVIFDTGSSNLWVPSAKCY-------FSVSCYFHSKYKSSHSSTYK-------R 142 (492)
Q Consensus 78 ~~pl~-n~~d~~Y~~~I~IGTP~Q~~~v~lDTGSs~~WV~s~~C~-------~~~~C~~~~~y~p~~SsT~~-------~ 142 (492)
.+|+. ++.+.+|+++|.|||| |+|||||+++||+|..|. .+..|..++.|++..+ ++. .
T Consensus 4 ~~pv~~~~~~~~Y~~~i~iGtP-----v~~DTGSs~lWv~c~~~~~~~~~~C~s~~C~~~~~~~~~sc-~~~~~~~~~~~ 77 (381)
T 1t6e_X 4 LAPVTKDPATSLYTIPFHDGAS-----LVLDVAGPLVWSTCDGGQPPAEIPCSSPTCLLANAYPAPGC-PAPSCGSDKHD 77 (381)
T ss_dssp EEEEEECTTTCCEEEEEETTEE-----EEEETTCCCEEECCCTTCCCCCCBTTSHHHHHHHSSCCTTC-CCCCC------
T ss_pred EEeEEecCCCcEEEEEEeCCCE-----EEEECCCCceEEeCCCCCCCCccCCCCchhccccCCCCCCC-CCccCCcCcCC
Confidence 46777 7789999999999997 999999999999995442 1345666667877533 322 1
Q ss_pred CCe-eEEEEecCCee-EEEEEEeEeEeee----eeeecc----eEEEEEecccccccccccceEEeccccccccCccCch
Q 011143 143 NGT-SAAIQYGTGAI-SGFFSQDNVKVGD----LVVKNQ----DFIEATKEASITFLAAKFDGILGLGFQEISIGKAIPV 212 (492)
Q Consensus 143 ~~~-~~~~~Yg~Gsv-~G~~~~Dtv~lg~----~~v~~~----~Fg~a~~~~~~~~~~~~~dGILGLG~~~~s~~~~~~~ 212 (492)
..| .|.+.|++|+. .|.+++|+|++++ ..++++ .||++.......+ ...++||||||++..+ +
T Consensus 78 ~~c~~f~i~YgdGs~~~G~l~~Dtv~ig~~~g~~~v~~~~~~~~Fg~~~~~~~~~~-~~~~dGIlGLg~~~~s------~ 150 (381)
T 1t6e_X 78 KPCTAYPYNPVSGACAAGSLSHTRFVANTTDGSKPVSKVNVGVLAACAPSKLLASL-PRGSTGVAGLANSGLA------L 150 (381)
T ss_dssp CBCEECCBCTTTCCBCCEEEEEEEEEEEEESSSSEEEEEEEEEEEEECCGGGGTTS-CTTEEEEEECSSSTTS------H
T ss_pred CccccccccccCCceeeEEEEEEEEEeeccCCCccccceeeeeEeecCcccccCCC-CCCCceEEEeCCCcch------h
Confidence 224 59999999985 8999999999985 466665 5699876532222 3578999999998776 6
Q ss_pred hhhhhhcCCCCCCeEEEEecCCCCCCCCeeEEECccCCC--CcccccEEEecccc---cceEEEeeeEEEcCeeeeecCC
Q 011143 213 WYNMLDQGLVKEPVFSFWLNRDIEGEEGGEIVFGGVDPD--HYKGEHTYVPVTKK---GYWQFEMGDVLIDGETTGYCST 287 (492)
Q Consensus 213 ~~~L~~qg~I~~~~FSl~L~~~~~~~~~G~L~fGgiD~~--~y~G~l~~~pv~~~---~~w~v~l~~i~vgg~~~~~~~~ 287 (492)
..+|.++++ .+++||+||.+. .+|+|+|||+|.. +|.|++.|+|+.+. .+|.|.+++|+||++.+..+..
T Consensus 151 ~~ql~~~~~-~~~~FS~~L~~~----~~G~l~fGg~~~~~~~~~g~l~~tPl~~~~~~~~y~v~l~~i~vg~~~~~~~~~ 225 (381)
T 1t6e_X 151 PAQVASAQK-VANRFLLCLPTG----GPGVAIFGGGPVPWPQFTQSMPYTPLVTKGGSPAHYISARSIVVGDTRVPVPEG 225 (381)
T ss_dssp HHHHHHHHT-CCSEEEEECCSS----SCEEEEESCCSCSCHHHHTTCCEEECBCCTTCCSCEECEEEEEETTEECCCCTT
T ss_pred HHHHhhhcc-cCceEEEEeCCC----CCeeEEeCCcccccccccCcceeeccccCCCCcceEEEEEEEEEcCEEecCCHH
Confidence 678988885 479999999875 2899999998765 58999999999763 4677999999999988764433
Q ss_pred ---CceEEEcCCcccccccHHHHHHHHHHhCCC
Q 011143 288 ---GCNAIADSGTSLLAGPTTIITQINHAIGAS 317 (492)
Q Consensus 288 ---~~~aiiDTGTt~i~lP~~~~~~l~~~i~a~ 317 (492)
...+||||||+++++|++++++|.+++.+.
T Consensus 226 ~~~~~~~iiDTGTtl~~lp~~~~~~l~~~~~~~ 258 (381)
T 1t6e_X 226 ALATGGVMLSTRLPYVLLRPDVYRPLMDAFTKA 258 (381)
T ss_dssp CSCTTCEEECSSCSSEEECHHHHHHHHHHHHHH
T ss_pred HccCCCEEEECCCccEEeCHHHHHHHHHHHHHh
Confidence 356999999999999999999999998764
No 35
>1lya_B Cathepsin D; lysosomal aspartic protease; HET: NAG BMA MAN; 2.50A {Homo sapiens} SCOP: b.50.1.2 PDB: 1lyb_B* 1lyw_B*
Probab=100.00 E-value=1.4e-32 Score=266.80 Aligned_cols=191 Identities=41% Similarity=0.797 Sum_probs=169.0
Q ss_pred eeeeeecceEEEEEecccccccccccceEEeccccccccCccCchhhhhhhcCCCCCCeEEEEecCCCCCCCCeeEEECc
Q 011143 168 GDLVVKNQDFIEATKEASITFLAAKFDGILGLGFQEISIGKAIPVWYNMLDQGLVKEPVFSFWLNRDIEGEEGGEIVFGG 247 (492)
Q Consensus 168 g~~~v~~~~Fg~a~~~~~~~~~~~~~dGILGLG~~~~s~~~~~~~~~~L~~qg~I~~~~FSl~L~~~~~~~~~G~L~fGg 247 (492)
|+.++++|.||++....+..+....++||||||++..+.....+++++|++||+|++++||+||++.......|+|+|||
T Consensus 1 gg~~v~~~~Fg~~~~~~~~~f~~~~~dGilGLg~~~~s~~~~~~~~~~l~~qg~i~~~~FS~~l~~~~~~~~~G~l~fGg 80 (241)
T 1lya_B 1 GGVKVERQVFGEATKQPGITFIAAKFDGILGMAYPRISVNNVLPVFDNLMQQKLVDQNIFSFYLSRDPDAQPGGELMLGG 80 (241)
T ss_dssp CCEEEEEEEEEEEEECCSSTTTSCSSSEEEECSCGGGCGGGCCCHHHHHHHTTCSSSSEEEEEECSSTTCSSCEEEEETS
T ss_pred CCeEECCeEEEEEEEccCCccccccCCEEEECCcchhhccCCChHHHHHHHCCCCCCCEEEEEEeCCCCCCCCcEEEECC
Confidence 46789999999999876655666778999999999888777889999999999999999999998874333479999999
Q ss_pred cCCCCcccccEEEecccccceEEEeeeEEEcCeeeeecCCCceEEEcCCcccccccHHHHHHHHHHhCCCcceecccccc
Q 011143 248 VDPDHYKGEHTYVPVTKKGYWQFEMGDVLIDGETTGYCSTGCNAIADSGTSLLAGPTTIITQINHAIGASGVISQECKTL 327 (492)
Q Consensus 248 iD~~~y~G~l~~~pv~~~~~w~v~l~~i~vgg~~~~~~~~~~~aiiDTGTt~i~lP~~~~~~l~~~i~a~~~~~~~C~~~ 327 (492)
+|+++|+|++.|+|+.+.+||.|.+++|+|+++.+. +..+..+++||||+++++|++++++|.+++++..
T Consensus 81 ~d~~~~~g~l~~~p~~~~~~~~v~l~~i~v~~~~~~-~~~~~~aiiDSGTt~~~lP~~~~~~l~~~~~~~~--------- 150 (241)
T 1lya_B 81 TDSKYYKGSLSYLNVTRKAYWQVHLDQVEVASGLTL-CKEGCEAIVDTGTSLMVGPVDEVRELQKAIGAVP--------- 150 (241)
T ss_dssp CCGGGEEEEEEEEECSSBTTBEEEEEEEEETTSCEE-STTCEEEEECTTCSSEEECHHHHHHHHHHHTCEE---------
T ss_pred cCHHHcCCceEEEECccccEEEEEEeEEEECCeeEe-ccCCCEEEEECCCccccCCHHHHHHHHHHhCCee---------
Confidence 999999999999999999999999999999998753 4567899999999999999999999999998761
Q ss_pred cccchhhHHHHHHhhcCcccccccccccccCCCcCcccccceeeccCCCCCCCCCCCCccchhhHHHHHHHHHHhhhccc
Q 011143 328 VDQYGKTILEMLIAETQPQKICSQMGLCTFDGTRGFSMGIESVIDKSSDKSSDGVHDSAMCSACEMAVIWMQNKLRRNET 407 (492)
Q Consensus 328 ~~~fg~~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 407 (492)
T Consensus 151 -------------------------------------------------------------------------------- 150 (241)
T 1lya_B 151 -------------------------------------------------------------------------------- 150 (241)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred HHHHHHHHHhhcCCCCCCcccccccccccCCCCcEEEEECCEEEeeCccceEEEecC
Q 011143 408 ADQILNYVNQLCDRLPSPNGESAVDCDNLSSMPNVSFTIGGKVFDLAPNEVWLYADF 464 (492)
Q Consensus 408 ~~~~~~~~~~~c~~~~~~~~~~~~~c~~~~~~p~i~~~~~g~~~~l~~~~y~~~~~~ 464 (492)
...+.|.++|+...++|+|+|.|+|++++|+|++|+++...
T Consensus 151 ----------------~~~g~~~~~C~~~~~~p~i~f~f~g~~~~l~~~~y~~~~~~ 191 (241)
T 1lya_B 151 ----------------LIQGEYMIPCEKVSTLPAITLKLGGKGYKLSPEDYTLKVSQ 191 (241)
T ss_dssp ----------------EETTEEEEEGGGGGGSCCEEEEETTEEEEECTTTSEEEETT
T ss_pred ----------------ccCCcEEEECCCCccCCeEEEEECCEEEEECHHHhEEEccC
Confidence 12466889999988999999999999999999999999764
No 36
>1lya_A Cathepsin D; lysosomal aspartic protease; HET: NAG BMA MAN; 2.50A {Homo sapiens} SCOP: b.50.1.2 PDB: 1lyb_A* 1lyw_A*
Probab=99.89 E-value=2.3e-23 Score=173.50 Aligned_cols=93 Identities=58% Similarity=1.028 Sum_probs=86.8
Q ss_pred ceEeccccCCceEEEEEEEcCCCceEEEEEeCCCCceeeeCCCCCC-CcCCCCCCCCCCCCCCceeECCeeEEEEecCCe
Q 011143 77 DIVALNNFMDAQYFGEVSIGTPSQTFTVIFDTGSSNLWVPSAKCYF-SVSCYFHSKYKSSHSSTYKRNGTSAAIQYGTGA 155 (492)
Q Consensus 77 ~~~pl~n~~d~~Y~~~I~IGTP~Q~~~v~lDTGSs~~WV~s~~C~~-~~~C~~~~~y~p~~SsT~~~~~~~~~~~Yg~Gs 155 (492)
..+||.|+.+.+|+++|.||||||+|.|+|||||+++||++..|.. ...|..++.|+|++|+||+..++.|.+.|++|+
T Consensus 3 ~~~~l~n~~~~~Y~~~i~iGTP~Q~~~v~~DTGSs~lWv~~~~C~~~~~~C~~~~~y~p~~SsT~~~~~~~~~i~Yg~Gs 82 (97)
T 1lya_A 3 IPEVLKNYMDAQYYGEIGIGTPPQCFTVVFDTGSSNLWVPSIHCKLLDIACWIHHKYNSDKSSTYVKNGTSFDIHYGSGS 82 (97)
T ss_dssp EEEEEEEETTTEEEEEEEETTTTEEEEEEEETTCCCEEEEBTTCCTTCHHHHTSCCBCGGGCTTCEEEEEEEEEECSSCE
T ss_pred ceEeeEECCCCeEEEEEEECCCCeEEEEEEeCCCCceEEeEcCccCcccccCCCCCCCchhCCCceeCCCcEEEEECCcE
Confidence 4689999999999999999999999999999999999999999952 247988999999999999999999999999999
Q ss_pred eEEEEEEeEeEeee
Q 011143 156 ISGFFSQDNVKVGD 169 (492)
Q Consensus 156 v~G~~~~Dtv~lg~ 169 (492)
+.|.++.|+|+|++
T Consensus 83 ~~G~~~~Dtv~i~g 96 (97)
T 1lya_A 83 LSGYLSQDTVSVPC 96 (97)
T ss_dssp EEEEEEEEEEEESC
T ss_pred EEEEEEEEEEEECC
Confidence 99999999999976
No 37
>3rfi_A Asp; PSI, saposin, hydrolase; 1.90A {Solanum tuberosum}
Probab=99.65 E-value=2e-17 Score=140.07 Aligned_cols=107 Identities=45% Similarity=0.969 Sum_probs=77.9
Q ss_pred CCCcceecccccccccchhhHHHHHHhhcCcccccccccccccCCCcCcccccceeeccCCCCCCCCCCCCccchhhHHH
Q 011143 315 GASGVISQECKTLVDQYGKTILEMLIAETQPQKICSQMGLCTFDGTRGFSMGIESVIDKSSDKSSDGVHDSAMCSACEMA 394 (492)
Q Consensus 315 ~a~~~~~~~C~~~~~~fg~~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 394 (492)
||.|.++-.|+..+..||..+++++++...|+.+|...|+|...+...+++++++++++..++++ +.++.+|.+|+|+
T Consensus 2 ~a~g~~~~~C~~~V~~Y~~~ii~~l~~~~~P~~iC~~lglC~~~~~~~~~~~i~~vv~~~~~~~~--~~~~~~C~~Ce~~ 79 (108)
T 3rfi_A 2 SAMAIVSMECKTIVSQYGEMIWDLLVSGVRPDQVCSQAGLCFVDGAQHVSSNIKTVVERETEGSS--VGEAPLCTACEMA 79 (108)
T ss_dssp ---CHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHTTSSCC--------------------------CCHHHHHHHHH
T ss_pred CCCchHHHHHHHHHHHHHHHHHHHHHhcCCHHHHHHHcCCcCCCccccccccccccccccccccc--CCCCCcChhHHHH
Confidence 46678888999999999999999999999999999999999999988888889998887644433 2378999999999
Q ss_pred HHHHHHHhhhcccHHHHHHHHHhhcCCCC
Q 011143 395 VIWMQNKLRRNETADQILNYVNQLCDRLP 423 (492)
Q Consensus 395 ~~~~~~~~~~~~~~~~~~~~~~~~c~~~~ 423 (492)
|.|++++|.+|.|.++|+++|+++|+++|
T Consensus 80 V~~ie~~L~~N~Te~eI~~~l~k~C~~LP 108 (108)
T 3rfi_A 80 VVWMQNQLKQEGTKEKVLEYVNQLCEKIP 108 (108)
T ss_dssp HHHHHHHHTSHHHHHHHHHHHHHHHTTCC
T ss_pred HHHHHHHHhcCchHHHHHHHHHHHHhhCc
Confidence 99999999999999999999999999987
No 38
>1b5f_B Protein (cardosin A); hydrolase, aspartic proteinase; HET: NAG FUC BMA MAN; 1.72A {Cynara cardunculus} SCOP: b.50.1.2
Probab=98.03 E-value=3.6e-06 Score=67.67 Aligned_cols=38 Identities=58% Similarity=0.864 Sum_probs=35.2
Q ss_pred ccccccccccCCCCcEEEEECCEEEeeCccceEEEecC
Q 011143 427 GESAVDCDNLSSMPNVSFTIGGKVFDLAPNEVWLYADF 464 (492)
Q Consensus 427 ~~~~~~c~~~~~~p~i~~~~~g~~~~l~~~~y~~~~~~ 464 (492)
|.|.|+|+.+.++|+|+|+|+|++++|+|++|+++...
T Consensus 1 G~y~v~C~~~~~~P~i~f~~gg~~~~l~~~~yi~~~~~ 38 (87)
T 1b5f_B 1 EELQVDCNTLSSMPNVSFTIGGKKFGLTPEQYILKVGK 38 (87)
T ss_dssp CCCEECGGGGGGCCCEEEEETTEEEEECHHHHEEEESC
T ss_pred CcEEEECCCCCcCCcEEEEECCEEEEECHHHhEEEccC
Confidence 57899999988999999999999999999999998754
No 39
>3bqp_A Proactivator polypeptide; saposin, sphingolipid activator protein, lipid binding protein, acid ceramidase,farber disease, lipid metabolism; 1.30A {Homo sapiens} PDB: 3bqq_C 2rb3_A 2r1q_A 2r0r_A
Probab=97.87 E-value=5e-06 Score=65.55 Aligned_cols=50 Identities=28% Similarity=0.646 Sum_probs=44.4
Q ss_pred CccchhhHHHHHHHHHHhhhcccHHHHHHHHHhhcCCCCCCcccccccccccC
Q 011143 385 SAMCSACEMAVIWMQNKLRRNETADQILNYVNQLCDRLPSPNGESAVDCDNLS 437 (492)
Q Consensus 385 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~c~~~~ 437 (492)
+..|.+|+++|.++++.|.+|.|.++|.+++++.|+++|.+ +...|..+.
T Consensus 2 ~~~C~~C~~~v~~i~~~l~~~~t~~~I~~~l~~~C~~lp~~---~~~~C~~~v 51 (80)
T 3bqp_A 2 GGFCEVCKKLVGYLDRNLEKNSTKQEILAALEKGCSFLPDP---YQKQCDQFV 51 (80)
T ss_dssp CTTHHHHHHHHHHHHHHSCTTCCHHHHHHHHHHHGGGSCGG---GHHHHHHHH
T ss_pred cCcchhHHHHHHHHHHHHHcccHHHHHHHHHHHHHHhCCCc---cchhhHHHH
Confidence 57899999999999999999999999999999999999974 455787653
No 40
>2qyp_A Proactivator polypeptide; saposin, activator protein, alternative splicing, disease mutation, gaucher disease, glycoprotein, GM2- gangliosidosis; 2.45A {Homo sapiens} SCOP: a.64.1.1 PDB: 2z9a_A
Probab=97.85 E-value=3.8e-06 Score=68.21 Aligned_cols=52 Identities=23% Similarity=0.586 Sum_probs=45.7
Q ss_pred CCCccchhhHHHHHHHHHHhhhcccHHHHHHHHHhhcCCCCCCcccccccccccC
Q 011143 383 HDSAMCSACEMAVIWMQNKLRRNETADQILNYVNQLCDRLPSPNGESAVDCDNLS 437 (492)
Q Consensus 383 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~c~~~~ 437 (492)
.++..|.+|+++|.++++.|..|.|.++|.++|++.|+++|.+ +...|..+.
T Consensus 3 ~~~~~C~~C~~vv~~i~~~l~~n~t~~~I~~~l~~~C~~lp~~---~~~~C~~~V 54 (91)
T 2qyp_A 3 VSDVYCEVCEFLVKEVTKLIDNNKTEKEILDAFDKMCSKLPKS---LSEECQEVV 54 (91)
T ss_dssp -CHHHHHHHHHHHHHHHHHHTSHHHHHHHHHHHHHHHHTSCSS---TTTTHHHHH
T ss_pred CCCCcchHHHHHHHHHHHHHhcCCcHHHHHHHHHHHHHHCCCC---cccchHHHH
Confidence 4678999999999999999999999999999999999999975 355887654
No 41
>4ddj_A Saposin-A, protein A; saposin fold, sphingolipid activator protein, galactosylcera lauryldimethylamine-N-oxide, lipid, detergent, lysosome; HET: LDA; 1.90A {Homo sapiens} PDB: 2dob_A*
Probab=97.71 E-value=1.8e-05 Score=62.93 Aligned_cols=51 Identities=33% Similarity=0.688 Sum_probs=42.7
Q ss_pred CCccchhhHHHHHHHHHHhhhcccHHHHHHHHHhhcCCCCCCccccccccccc
Q 011143 384 DSAMCSACEMAVIWMQNKLRRNETADQILNYVNQLCDRLPSPNGESAVDCDNL 436 (492)
Q Consensus 384 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~c~~~ 436 (492)
.+..|.+|+++|.++++++..|.|.++|.++|++.|+++|.+. +.-.|..+
T Consensus 2 ~~~~C~~C~~~v~~~~~~l~~n~t~~~I~~~l~~~C~~lp~~~--~~~~C~~~ 52 (83)
T 4ddj_A 2 GSLPCDICKDVVTAAGDMLKDNATEEEILVYLEKTCDWLPKPN--MSASCKEI 52 (83)
T ss_dssp -CHHHHHHHHHHHHHHHHHHSTTHHHHHHHHHHHHHTTSCTTH--HHHHHHHH
T ss_pred CCCcchHHHHHHHHHHHHHHcCccHHHHHHHHHHHHHhCCCch--hhHHHHHH
Confidence 3578999999999999999999999999999999999998752 12256543
No 42
>1of9_A Pore-forming peptide ameobapore A; toxin, saplip, amoebapore A; NMR {Entamoeba histolytica} SCOP: a.64.1.4
Probab=97.55 E-value=2.5e-05 Score=61.35 Aligned_cols=49 Identities=22% Similarity=0.519 Sum_probs=42.4
Q ss_pred CCccchhhHHHHHHHHHHhhhcccHHHHHHHHHhhcCCCCCCccccccccccc
Q 011143 384 DSAMCSACEMAVIWMQNKLRRNETADQILNYVNQLCDRLPSPNGESAVDCDNL 436 (492)
Q Consensus 384 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~c~~~ 436 (492)
|...|.+|+++|..+++.+..| |.++|.++|++.|+.+|++. .-.|..+
T Consensus 1 ~~~~C~~C~~vv~~ve~~l~~n-t~~~I~~~l~~~C~~lp~~~---~~~C~~~ 49 (77)
T 1of9_A 1 GEILCNLCTGLINTLENLLTTK-GADKVKDYISSLCNKASGFI---ATLCTKV 49 (77)
T ss_dssp CCSSHHHHHHHHHHHHHHCSSS-CSHHHHHHHHHHHTTCSSTT---HHHHHHH
T ss_pred CCCcchhHHHHHHHHHHHHHHC-cHHHHHHHHHHHHHcCChHH---HHHHHHH
Confidence 3578999999999999999999 99999999999999998654 3367654
No 43
>2gtg_A Proactivator polypeptide; saposin, sphingolipid activator protein, lipid-binding prote binding protein; 2.40A {Homo sapiens} SCOP: a.64.1.1 PDB: 1m12_A 1sn6_A
Probab=97.48 E-value=8.3e-05 Score=59.03 Aligned_cols=51 Identities=24% Similarity=0.619 Sum_probs=43.1
Q ss_pred CCCccchhhHHHHHHHHHHhhhcccHHHHHHHHHhhcCCCCCCccccccccccc
Q 011143 383 HDSAMCSACEMAVIWMQNKLRRNETADQILNYVNQLCDRLPSPNGESAVDCDNL 436 (492)
Q Consensus 383 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~c~~~ 436 (492)
+++..|.+|+++|..+++.|..|.|.++|.++|+..|+.+|.+ +.-.|..+
T Consensus 2 ~~~~~C~~C~~~v~~i~~~l~~~~t~~~I~~~l~~~C~~lp~~---~~~~C~~~ 52 (83)
T 2gtg_A 2 DSDVYCEVCEFLVKEVTKLIDNNKTEKEILDAFDKMCSKLPKS---LSEECQEV 52 (83)
T ss_dssp --CCHHHHHHHHHHHHHHHHHTTCCHHHHHHHHHHHTTSSCHH---HHHHHHHH
T ss_pred CCCCcChhHHHHHHHHHHHHHcCCcHHHHHHHHHHHHHHCCCc---chhHHHHH
Confidence 4678999999999999999999999999999999999999953 33466654
No 44
>1n69_A Saposin B; lipid binding protein, glycosphingolipid activator protein; HET: PEH; 2.20A {Homo sapiens} SCOP: a.64.1.3
Probab=97.32 E-value=0.00014 Score=57.62 Aligned_cols=50 Identities=32% Similarity=0.518 Sum_probs=42.7
Q ss_pred CCccchhhHHHHHHHHHHhhhcccH-HHHHHHHHhhcCCCCCCccccccccccc
Q 011143 384 DSAMCSACEMAVIWMQNKLRRNETA-DQILNYVNQLCDRLPSPNGESAVDCDNL 436 (492)
Q Consensus 384 ~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~c~~~~~~~~~~~~~c~~~ 436 (492)
++..|..|+++|..+++++..|.|. ++|.++|++.|+++|.. +.-.|..+
T Consensus 2 ~~~~C~~C~~~V~~ve~~l~~n~t~~~~I~~~l~~~C~~lp~~---~~~~C~~~ 52 (81)
T 1n69_A 2 DGDVCQDCIQMVTDIQTAVRTNSTFVQALVEHVKEECDRLGPG---MADICKNY 52 (81)
T ss_dssp -CHHHHHHHHHHHHHHHHHHHCTTHHHHHHHHHHHHGGGGCTT---HHHHHHHH
T ss_pred CCCcchHHHHHHHHHHHHHHhCCcHHHHHHHHHHHHHHHcCcH---HHHHHHHH
Confidence 4568999999999999999999999 99999999999999954 33366654
No 45
>2js9_A Saposin-like protein family protein 5; caenopore-5, saposin-like fold, antimicrobial protein; NMR {Caenorhabditis elegans} PDB: 2jsa_A
Probab=97.26 E-value=7e-05 Score=61.65 Aligned_cols=54 Identities=19% Similarity=0.362 Sum_probs=45.5
Q ss_pred CCCccchhhHHHHHHHHHHhhhcccHHHHHHHHHhhcCCCCCCcccccccccccCC
Q 011143 383 HDSAMCSACEMAVIWMQNKLRRNETADQILNYVNQLCDRLPSPNGESAVDCDNLSS 438 (492)
Q Consensus 383 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~c~~~~~ 438 (492)
.++..|.+|+++|..+++++ |.|.++|.++|++.|+.+|.+...+.-.|+.+..
T Consensus 19 ~~~~~C~~C~~vV~~ve~~l--n~t~~~I~~~L~~~C~~lp~~ipf~~~~C~~~V~ 72 (99)
T 2js9_A 19 RSALSCQMCELVVKKYEGSA--DKDANVIKKDFDAECKKLFHTIPFGTRECDHYVN 72 (99)
T ss_dssp CCSSTHHHHHHHHHHHTTTS--SCCHHHHHHHHHHHHHTGGGGSTTHHHHHHTTTT
T ss_pred CCCCcchhHHHHHHHHHHHH--HhhHHHHHHHHHHHHHcCCCcchHHHHHHHHHHH
Confidence 36789999999999999999 9999999999999999999653334557887653
No 46
>1l9l_A Granulysin; saposin fold, membrane-lytic, antimicrobial protein; HET: MPO; 0.92A {Homo sapiens} SCOP: a.64.1.1
Probab=97.26 E-value=0.00017 Score=56.08 Aligned_cols=47 Identities=17% Similarity=0.250 Sum_probs=40.2
Q ss_pred ccchhhHHHHHHHHHHhhhcccHHHHHHHHHhhcCCCCCCccccccccccc
Q 011143 386 AMCSACEMAVIWMQNKLRRNETADQILNYVNQLCDRLPSPNGESAVDCDNL 436 (492)
Q Consensus 386 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~c~~~ 436 (492)
..|.+|+++|..++..| .|.|.++|.++|++.|+++|.+... .|..+
T Consensus 2 ~~C~~C~~~v~~le~~l-~n~Te~~I~~~L~~vC~~l~~~~~~---~C~~~ 48 (74)
T 1l9l_A 2 RDYRTCLTIVQKLKKMV-DKPTQRSVSNAATRVCRTGRSRWRD---VCRNF 48 (74)
T ss_dssp HHHHHHHHHHHHHHHHC-SSCCHHHHHHHHHHGGGSSCHHHHH---HHHHH
T ss_pred CCChHHHHHHHHHHHHh-cccCHHHHHHHHHHHHHhCChHHHH---HHHHH
Confidence 46999999999999999 9999999999999999999864432 56543
No 47
>1nkl_A NK-lysin; saposin fold, antibacterial peptide, tumourolytic peptide; NMR {Sus scrofa} SCOP: a.64.1.1
Probab=97.25 E-value=0.00014 Score=57.16 Aligned_cols=48 Identities=17% Similarity=0.435 Sum_probs=42.0
Q ss_pred CccchhhHHHHHHHHHHhhhcccHHHHHHHHHhhcCCCCCCccccccccccc
Q 011143 385 SAMCSACEMAVIWMQNKLRRNETADQILNYVNQLCDRLPSPNGESAVDCDNL 436 (492)
Q Consensus 385 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~c~~~ 436 (492)
+..|.+|+++|..+++.+..|.|.++|.++|++.|+.+|. +.-.|..+
T Consensus 1 g~~C~~C~~iv~~ve~~l~~~~t~~~I~~~l~~~C~~lp~----~~~~C~~~ 48 (78)
T 1nkl_A 1 GYFCESCRKIIQKLEDMVGPQPNEDTVTQAASQVCDKLKI----LRGLCKKI 48 (78)
T ss_dssp CCHHHHHHHHHHHHHHHHCSSCCHHHHHHHHHHHHHHSCS----THHHHHHH
T ss_pred CCcchHHHHHHHHHHHHHHcCCcHHHHHHHHHHHHhhCch----hHHHHHHH
Confidence 3579999999999999999999999999999999999985 33467654
No 48
>2i1a_A DNA damage-inducible protein DDI1; acid protease fold, dimer, retroviral protease domain, protein turnover; HET: DNA; 2.30A {Saccharomyces cerevisiae}
Probab=92.54 E-value=0.17 Score=43.95 Aligned_cols=91 Identities=16% Similarity=0.238 Sum_probs=52.0
Q ss_pred CCceEEEEEEEcCCCceEEEEEeCCCCceeeeCCCCCCCcCCCCCCCCCCCCCCceeECCeeEEEEecCCe--eEEEEEE
Q 011143 85 MDAQYFGEVSIGTPSQTFTVIFDTGSSNLWVPSAKCYFSVSCYFHSKYKSSHSSTYKRNGTSAAIQYGTGA--ISGFFSQ 162 (492)
Q Consensus 85 ~d~~Y~~~I~IGTP~Q~~~v~lDTGSs~~WV~s~~C~~~~~C~~~~~y~p~~SsT~~~~~~~~~~~Yg~Gs--v~G~~~~ 162 (492)
.+..+++++.|+ ++++++++|||++.+.+...... .+.-....+.. +. ....|.|. ..|.+..
T Consensus 23 ~~~~~~v~v~In--G~~~~~LvDTGAs~s~is~~~a~---~lgl~~~~~~~----~~------~~a~g~g~~~~~~~~~~ 87 (148)
T 2i1a_A 23 QVPMLYINIEIN--NYPVKAFVDTGAQTTIMSTRLAK---KTGLSRMIDKR----FI------GEARGVGTGKIIGRIHQ 87 (148)
T ss_dssp CCCCCEEEEEET--TEEEEEEECTTCSSCEEEHHHHH---HHTGGGGCBCC----CC-----------------CEEEEE
T ss_pred ccceEEEEEEEC--CEEEEEEEECCCCccccCHHHHH---HcCCCccCCcc----eE------EEEecCCCcccccEEEE
Confidence 356789999998 68999999999999888532211 11110111111 00 01122222 3466667
Q ss_pred eEeEeeeeeeecceEEEEEecccccccccccceEEecc
Q 011143 163 DNVKVGDLVVKNQDFIEATKEASITFLAAKFDGILGLG 200 (492)
Q Consensus 163 Dtv~lg~~~v~~~~Fg~a~~~~~~~~~~~~~dGILGLG 200 (492)
+.+.+|+...+ ..|.+.. .+.+||||+-
T Consensus 88 ~~i~ig~~~~~-~~~~vl~---------~~~d~iLG~d 115 (148)
T 2i1a_A 88 AQVKIETQYIP-CSFTVLD---------TDIDVLIGLD 115 (148)
T ss_dssp EEEEETTEEEE-EEEEEEC---------SSCSEEECHH
T ss_pred EEEEECCEEec-eeEEEec---------CCCCeEecHH
Confidence 88999987754 5554432 1358999986
No 49
>2qyp_A Proactivator polypeptide; saposin, activator protein, alternative splicing, disease mutation, gaucher disease, glycoprotein, GM2- gangliosidosis; 2.45A {Homo sapiens} SCOP: a.64.1.1 PDB: 2z9a_A
Probab=87.18 E-value=0.23 Score=39.58 Aligned_cols=39 Identities=41% Similarity=0.910 Sum_probs=34.7
Q ss_pred eecccccccccchhhHHHHHHhhcCcccccccccccccC
Q 011143 320 ISQECKTLVDQYGKTILEMLIAETQPQKICSQMGLCTFD 358 (492)
Q Consensus 320 ~~~~C~~~~~~fg~~~~~~~~~~~~~~~~~~~~~~c~~~ 358 (492)
+...|+..+..|++.+++++.+...|+.+|...|+|.-.
T Consensus 46 ~~~~C~~~V~~y~~~ii~~l~~~~~P~~iC~~l~lC~~~ 84 (91)
T 2qyp_A 46 LSEECQEVVDTYGSSILSILLEEVSPELVCSMLHLCSGT 84 (91)
T ss_dssp TTTTHHHHHHHHHHHHHHHHHHTCCHHHHHHTTTCC---
T ss_pred cccchHHHHHHHHHHHHHHHHHcCCHHHHHhhcCCCCCc
Confidence 678999999999999999999999999999999999764
No 50
>3vcm_P Prorenin; aspartic proteases, hydrolase; HET: NAG; 2.93A {Homo sapiens}
Probab=85.89 E-value=0.52 Score=32.01 Aligned_cols=25 Identities=12% Similarity=-0.117 Sum_probs=20.7
Q ss_pred ceEEEeeeecCcchhhhcccCcccc
Q 011143 29 GLVRIGLRKKKLDQINRLVGQTVSK 53 (492)
Q Consensus 29 ~~~ripL~r~~~~~~~~~~~~~~~~ 53 (492)
+++||||+|.++.++.+.+.+....
T Consensus 7 ~l~RIPL~k~kS~R~~l~e~g~~~~ 31 (43)
T 3vcm_P 7 TFKRIFLKRMPSIRESLKERGVDMA 31 (43)
T ss_dssp CCEEEEEEECCCHHHHHHHHTCCGG
T ss_pred ceeEEeeeecccHHHHHHHcCchHH
Confidence 5789999999999999888776433
No 51
>3s8i_A Protein DDI1 homolog 1; protease, structural genomics, structural genomics consortiu retropepsin-like domain, protein turnover, hydrolase; 1.70A {Homo sapiens}
Probab=85.72 E-value=1 Score=39.33 Aligned_cols=90 Identities=14% Similarity=0.271 Sum_probs=52.4
Q ss_pred ceEEEEEEEcCCCceEEEEEeCCCCceeeeCCCCCCCcCCCCCCCCCCCCCCceeECCeeEEEEecCC--eeEEEEEEeE
Q 011143 87 AQYFGEVSIGTPSQTFTVIFDTGSSNLWVPSAKCYFSVSCYFHSKYKSSHSSTYKRNGTSAAIQYGTG--AISGFFSQDN 164 (492)
Q Consensus 87 ~~Y~~~I~IGTP~Q~~~v~lDTGSs~~WV~s~~C~~~~~C~~~~~y~p~~SsT~~~~~~~~~~~Yg~G--sv~G~~~~Dt 164 (492)
..|++++.|. ++++++++|||++.+.+...-. ..|.-...-+. . +. -...+.| .+.|......
T Consensus 23 ~~l~v~~~In--g~~v~~LVDTGAs~s~Is~~~A---~rlGL~~~~~~-~---~~------~~a~g~G~~~~~g~v~~~~ 87 (148)
T 3s8i_A 23 TMLYINCKVN--GHPLKAFVDSGAQMTIMSQACA---ERCNIMRLVDR-R---WA------GVAKGVGTQRIIGRVHLAQ 87 (148)
T ss_dssp CCCEEEEEET--TEEEEEEECTTCSSCEEEHHHH---HHTTCGGGEEG-G---GC------EECCC---CEEEEEEEEEE
T ss_pred CEEEEEEEEC--CEEEEEEEeCCCCcEeeCHHHH---HHcCCccccCc-c---ee------EEEEcCCccEEEEEEEEEE
Confidence 4689999998 6999999999999998864321 12221000000 0 00 0112222 2467777788
Q ss_pred eEeeeeeeecceEEEEEecccccccccccceEEecc
Q 011143 165 VKVGDLVVKNQDFIEATKEASITFLAAKFDGILGLG 200 (492)
Q Consensus 165 v~lg~~~v~~~~Fg~a~~~~~~~~~~~~~dGILGLG 200 (492)
+++|+..++ ..|.+.. ....++|||+-
T Consensus 88 I~Ig~~~~~-~~~~Vle--------~~~~d~LLGmD 114 (148)
T 3s8i_A 88 IQIEGDFLQ-CSFSILE--------DQPMDMLLGLD 114 (148)
T ss_dssp EEETTEEEE-EEEEEET--------TCSSSEEECHH
T ss_pred EEECCEEEE-EEEEEeC--------CCCcCeeccHH
Confidence 999987653 3443332 12358999986
No 52
>3bqp_A Proactivator polypeptide; saposin, sphingolipid activator protein, lipid binding protein, acid ceramidase,farber disease, lipid metabolism; 1.30A {Homo sapiens} PDB: 3bqq_C 2rb3_A 2r1q_A 2r0r_A
Probab=84.63 E-value=0.27 Score=37.77 Aligned_cols=37 Identities=24% Similarity=0.749 Sum_probs=34.9
Q ss_pred eecccccccccchhhHHHHHHhhcCcccccccccccc
Q 011143 320 ISQECKTLVDQYGKTILEMLIAETQPQKICSQMGLCT 356 (492)
Q Consensus 320 ~~~~C~~~~~~fg~~~~~~~~~~~~~~~~~~~~~~c~ 356 (492)
+...|+..+..|++.+++.+.+...|+.+|...|+|.
T Consensus 43 ~~~~C~~~v~~y~~~ii~~l~~~~~P~~iC~~l~~C~ 79 (80)
T 3bqp_A 43 YQKQCDQFVAEYEPVLIEILVEVMDPSFVCLKIGACP 79 (80)
T ss_dssp GHHHHHHHHHHHHHHHHHHHTTCCCHHHHHHHTTSSC
T ss_pred cchhhHHHHHHHHHHHHHHHHHCCCHHHHHhhcCCCC
Confidence 6788999999999999999999999999999999994
No 53
>2js9_A Saposin-like protein family protein 5; caenopore-5, saposin-like fold, antimicrobial protein; NMR {Caenorhabditis elegans} PDB: 2jsa_A
Probab=81.04 E-value=0.6 Score=37.93 Aligned_cols=39 Identities=23% Similarity=0.522 Sum_probs=35.8
Q ss_pred cceecccccccccchhhHHHHHHhhcCcccccccccccc
Q 011143 318 GVISQECKTLVDQYGKTILEMLIAETQPQKICSQMGLCT 356 (492)
Q Consensus 318 ~~~~~~C~~~~~~fg~~~~~~~~~~~~~~~~~~~~~~c~ 356 (492)
+++.-.|+..+..|++.+++++.+...|+.+|...|+|.
T Consensus 61 pf~~~~C~~~V~~y~~~II~~L~~~~~P~~VC~~L~lC~ 99 (99)
T 2js9_A 61 PFGTRECDHYVNSKVDPIIHELEGGTAPKDVCTKLNECP 99 (99)
T ss_dssp TTHHHHHHTTTTTTHHHHHHHHHHTCCTTHHHHHTTCCC
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHhCCCHHHHHhhcCCCC
Confidence 346778999999999999999999999999999999993
No 54
>1nkl_A NK-lysin; saposin fold, antibacterial peptide, tumourolytic peptide; NMR {Sus scrofa} SCOP: a.64.1.1
Probab=77.06 E-value=0.44 Score=36.80 Aligned_cols=37 Identities=22% Similarity=0.575 Sum_probs=35.0
Q ss_pred eecccccccccchhhHHHHHHhhcCcccccccccccc
Q 011143 320 ISQECKTLVDQYGKTILEMLIAETQPQKICSQMGLCT 356 (492)
Q Consensus 320 ~~~~C~~~~~~fg~~~~~~~~~~~~~~~~~~~~~~c~ 356 (492)
+.-.|+..+..|++..++.+.+...|+.+|...|+|.
T Consensus 41 ~~~~C~~~V~~y~~~iI~~l~~~~~P~~IC~~l~lC~ 77 (78)
T 1nkl_A 41 LRGLCKKIMRSFLRRISWDILTGKKPQAICVDIKICK 77 (78)
T ss_dssp THHHHHHHHHHHHHHHHHHHHTTCCHHHHHHHTTCSC
T ss_pred hHHHHHHHHHHHHHHHHHHHHHCCCHHHHHhccCCCC
Confidence 6778999999999999999999999999999999994
No 55
>2gtg_A Proactivator polypeptide; saposin, sphingolipid activator protein, lipid-binding prote binding protein; 2.40A {Homo sapiens} SCOP: a.64.1.1 PDB: 1m12_A 1sn6_A
Probab=76.98 E-value=0.43 Score=37.07 Aligned_cols=37 Identities=43% Similarity=1.006 Sum_probs=34.5
Q ss_pred eecccccccccchhhHHHHHHhhcCcccccccccccc
Q 011143 320 ISQECKTLVDQYGKTILEMLIAETQPQKICSQMGLCT 356 (492)
Q Consensus 320 ~~~~C~~~~~~fg~~~~~~~~~~~~~~~~~~~~~~c~ 356 (492)
+.-.|+..+..|++.+++.+.+...|+.+|...|+|.
T Consensus 45 ~~~~C~~~V~~y~~~ii~~l~~~~~P~~iC~~l~lC~ 81 (83)
T 2gtg_A 45 LSEECQEVVDTYGSSILSILLEEVSPELVCSMLHLCS 81 (83)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHTTCCHHHHHHHTTSCC
T ss_pred chhHHHHHHHHHHHHHHHHHHHCCCHHHHHHhcCCCC
Confidence 5678999999999999999999999999999999995
No 56
>1of9_A Pore-forming peptide ameobapore A; toxin, saplip, amoebapore A; NMR {Entamoeba histolytica} SCOP: a.64.1.4
Probab=75.38 E-value=0.46 Score=36.60 Aligned_cols=38 Identities=18% Similarity=0.532 Sum_probs=34.9
Q ss_pred cceecccccccccchhhHHHHHHhhcCccccccccccc
Q 011143 318 GVISQECKTLVDQYGKTILEMLIAETQPQKICSQMGLC 355 (492)
Q Consensus 318 ~~~~~~C~~~~~~fg~~~~~~~~~~~~~~~~~~~~~~c 355 (492)
+.+.-.|+..+..|++..++.+.+...|+.+|...|+|
T Consensus 40 ~~~~~~C~~~V~~y~~~iI~~l~~~~~P~~IC~~l~lC 77 (77)
T 1of9_A 40 GFIATLCTKVLDFGIDKLIQLIEDKVDANAICAKIHAC 77 (77)
T ss_dssp STTHHHHHHHHHHCHHHHHHHHHHTCCHHHHHHHHSCC
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHhCCCHHHHHhhcCCC
Confidence 34667899999999999999999999999999999998
No 57
>2hs1_A HIV-1 protease; ultra-high resolution active site surface binding site, HYDR; HET: 017; 0.84A {Human immunodeficiency virus 1} PDB: 3nu4_A* 3tl9_A* 3tkw_A* 3tkg_A* 3ndu_A* 3ndt_A* 3k4v_A* 3a2o_A* 1fgc_C* 2a1e_A* 2aod_A* 2aoi_A* 2aoj_A* 2hb3_A* 2ien_A* 1sdt_A* 2z4o_A* 2zye_A* 2nmw_A* 3b7v_A* ...
Probab=71.90 E-value=4.7 Score=32.63 Aligned_cols=29 Identities=21% Similarity=0.357 Sum_probs=24.7
Q ss_pred EEEEEEcCCCceEEEEEeCCCCceeeeCCCC
Q 011143 90 FGEVSIGTPSQTFTVIFDTGSSNLWVPSAKC 120 (492)
Q Consensus 90 ~~~I~IGTP~Q~~~v~lDTGSs~~WV~s~~C 120 (492)
.++|.|| +|.+.+++|||..++-+.....
T Consensus 10 ~vtvkI~--Gq~~eaLLDTGAD~TVl~~~~~ 38 (99)
T 2hs1_A 10 LVTIKIG--GQLKEALLDTGADDTIIEEMSL 38 (99)
T ss_dssp EEEEEET--TEEEEEEECTTCSSEEESCCSS
T ss_pred EEEEEEC--CEEEEEEeccCCCcEEEecccC
Confidence 5679999 6999999999999999975544
No 58
>1fmb_A EIAV protease; hydrolase (acid proteinase), RNA-directed DNA polymerase, AS protease, endonuclease, polyprotein; HET: HYB; 1.80A {Equine infectious anemia virus} SCOP: b.50.1.1 PDB: 2fmb_A*
Probab=70.99 E-value=3.9 Score=33.35 Aligned_cols=27 Identities=22% Similarity=0.279 Sum_probs=23.6
Q ss_pred EEEEEEEcCCCceEEEEEeCCCCceeeeC
Q 011143 89 YFGEVSIGTPSQTFTVIFDTGSSNLWVPS 117 (492)
Q Consensus 89 Y~~~I~IGTP~Q~~~v~lDTGSs~~WV~s 117 (492)
-.++|.|| +|.+.+++|||..++-+..
T Consensus 9 P~v~v~I~--Gq~~e~LLDTGAD~TVl~~ 35 (104)
T 1fmb_A 9 PTTIVLIN--DTPLNVLLDTGADTSVLTT 35 (104)
T ss_dssp CEEEEEET--TEEEEEEECTTCSSCEEEH
T ss_pred CEEEEEEC--CEEEEEEeccCCCcEEEcc
Confidence 36789999 6999999999999999873
No 59
>4ddj_A Saposin-A, protein A; saposin fold, sphingolipid activator protein, galactosylcera lauryldimethylamine-N-oxide, lipid, detergent, lysosome; HET: LDA; 1.90A {Homo sapiens} PDB: 2dob_A*
Probab=70.02 E-value=0.75 Score=35.68 Aligned_cols=37 Identities=38% Similarity=0.875 Sum_probs=33.7
Q ss_pred eecccccccccchhhHHHHHHhh-cCcccccccccccc
Q 011143 320 ISQECKTLVDQYGKTILEMLIAE-TQPQKICSQMGLCT 356 (492)
Q Consensus 320 ~~~~C~~~~~~fg~~~~~~~~~~-~~~~~~~~~~~~c~ 356 (492)
+.-.|+..+..|++..++.+.+. ..|+.+|...|+|.
T Consensus 45 ~~~~C~~~v~~y~~~ii~~l~~~~~~p~~vC~~l~lC~ 82 (83)
T 4ddj_A 45 MSASCKEIVDSYLPVILDIIKGEMSRPGEVCSALNLCE 82 (83)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHTCHHHHHHHTTSCC
T ss_pred hhHHHHHHHHHHHHHHHHHHHHccCCHHHHHhHcCCCC
Confidence 46789999999999999999988 48999999999994
No 60
>1htr_P Progastricsin (Pro segment); aspartyl protease; 1.62A {Homo sapiens} SCOP: b.50.1.2 PDB: 1avf_P
Probab=68.37 E-value=2.8 Score=27.71 Aligned_cols=23 Identities=17% Similarity=0.085 Sum_probs=18.9
Q ss_pred eEEEeeeecCcchhhhcccCccc
Q 011143 30 LVRIGLRKKKLDQINRLVGQTVS 52 (492)
Q Consensus 30 ~~ripL~r~~~~~~~~~~~~~~~ 52 (492)
++||||+|.++.++.+.+.+...
T Consensus 2 l~RIpL~K~~s~R~~l~~~g~~~ 24 (43)
T 1htr_P 2 VVKVPLKKFKSIRETMKEKGLLG 24 (43)
T ss_dssp CEEEEEEECCCHHHHHHHTTCHH
T ss_pred eEEEeeeEcchHHHHHHHcCcHH
Confidence 68999999999999887766543
No 61
>1n69_A Saposin B; lipid binding protein, glycosphingolipid activator protein; HET: PEH; 2.20A {Homo sapiens} SCOP: a.64.1.3
Probab=65.99 E-value=1 Score=34.89 Aligned_cols=37 Identities=30% Similarity=0.825 Sum_probs=31.8
Q ss_pred ceecccccccccchhhHHHHHHhhcCcccccccccccc
Q 011143 319 VISQECKTLVDQYGKTILEMLIAETQPQKICSQMGLCT 356 (492)
Q Consensus 319 ~~~~~C~~~~~~fg~~~~~~~~~~~~~~~~~~~~~~c~ 356 (492)
.++-.|+..+..||+..++++. ...|+.+|...|+|.
T Consensus 44 ~~~~~C~~~V~~y~~~ii~~l~-~~~P~~iC~~lglC~ 80 (81)
T 1n69_A 44 GMADICKNYISQYSEIAIQMMM-HMQPKEICALVGFCD 80 (81)
T ss_dssp THHHHHHHHHHHHHHHHHHHHT-TSCHHHHHHHTTSCC
T ss_pred HHHHHHHHHHHHHHHHHHHHHh-cCCHHHHHhhcCCCC
Confidence 3677899999999997776665 799999999999994
No 62
>3ec0_A Protease; HIV-2, inhibitor, hydrolase; HET: GRL; 1.18A {Human immunodeficiency virus type 2} SCOP: b.50.1.1 PDB: 1hii_A* 1hsi_A 1hsh_A* 1idb_A* 1jld_A* 2mip_A 1ida_A* 3ebz_A* 3ecg_A* 3s45_A* 4upj_A* 1ivq_A* 1ivp_A 2hpf_A 3upj_A* 2hpe_A* 5upj_A* 6upj_A* 1sip_A 1tcw_A* ...
Probab=65.41 E-value=7.2 Score=31.50 Aligned_cols=29 Identities=24% Similarity=0.303 Sum_probs=24.5
Q ss_pred EEEEEEcCCCceEEEEEeCCCCceeeeCCCC
Q 011143 90 FGEVSIGTPSQTFTVIFDTGSSNLWVPSAKC 120 (492)
Q Consensus 90 ~~~I~IGTP~Q~~~v~lDTGSs~~WV~s~~C 120 (492)
++++.|| +|.+.+++|||.+++-+...+.
T Consensus 10 ~vti~I~--Gq~~e~LLDTGAD~TVl~~~~~ 38 (99)
T 3ec0_A 10 VVTAYIE--GQPVEVLLDTGADDSIVAGIEL 38 (99)
T ss_dssp EEEEEET--TEEEEEEECTTCSSCEESSCCC
T ss_pred eEEEEEC--CEEEEEEEecCCCceEEcCccc
Confidence 6779999 6999999999999999965443
No 63
>3liy_A Protease; hydrolase, hydrolase-hydrolase inhibitor complex; HET: STA; 1.86A {Human t-lymphotropic virus 1} PDB: 2b7f_A* 3liq_A* 3lit_A* 3liv_A* 3lix_A* 3lin_A*
Probab=63.91 E-value=6.4 Score=32.60 Aligned_cols=32 Identities=19% Similarity=0.280 Sum_probs=26.3
Q ss_pred EEEEEEc---CCCceEEEEEeCCCCceeeeCCCCC
Q 011143 90 FGEVSIG---TPSQTFTVIFDTGSSNLWVPSAKCY 121 (492)
Q Consensus 90 ~~~I~IG---TP~Q~~~v~lDTGSs~~WV~s~~C~ 121 (492)
.++|.|| +|+|.+..++|||..++-+....++
T Consensus 12 lvtikI~~~~~~Gq~~eaLLDTGADdTVl~~~~lP 46 (116)
T 3liy_A 12 VIKAQVDTQTSHPKTIEALLDTGADMTVIPIALFS 46 (116)
T ss_dssp EEEEEEECSSSCCEEEEEEECTTBSSCEEEGGGSC
T ss_pred eEEEEEccccCCCeEeEEEeccCCCccEEecccCC
Confidence 4556666 8899999999999999999876664
No 64
>2i1a_A DNA damage-inducible protein DDI1; acid protease fold, dimer, retroviral protease domain, protein turnover; HET: DNA; 2.30A {Saccharomyces cerevisiae}
Probab=63.26 E-value=6.1 Score=33.79 Aligned_cols=29 Identities=17% Similarity=0.243 Sum_probs=23.9
Q ss_pred EEEcCeeeeecCCCceEEEcCCcccccccHHHHHHH
Q 011143 275 VLIDGETTGYCSTGCNAIADSGTSLLAGPTTIITQI 310 (492)
Q Consensus 275 i~vgg~~~~~~~~~~~aiiDTGTt~i~lP~~~~~~l 310 (492)
+.|||+.+ .+++|||++.+.++.+..+++
T Consensus 31 v~InG~~~-------~~LvDTGAs~s~is~~~a~~l 59 (148)
T 2i1a_A 31 IEINNYPV-------KAFVDTGAQTTIMSTRLAKKT 59 (148)
T ss_dssp EEETTEEE-------EEEECTTCSSCEEEHHHHHHH
T ss_pred EEECCEEE-------EEEEECCCCccccCHHHHHHc
Confidence 57888755 489999999999998877654
No 65
>3s8i_A Protein DDI1 homolog 1; protease, structural genomics, structural genomics consortiu retropepsin-like domain, protein turnover, hydrolase; 1.70A {Homo sapiens}
Probab=62.66 E-value=5.4 Score=34.63 Aligned_cols=29 Identities=17% Similarity=0.280 Sum_probs=24.1
Q ss_pred EEEcCeeeeecCCCceEEEcCCcccccccHHHHHHH
Q 011143 275 VLIDGETTGYCSTGCNAIADSGTSLLAGPTTIITQI 310 (492)
Q Consensus 275 i~vgg~~~~~~~~~~~aiiDTGTt~i~lP~~~~~~l 310 (492)
+.|||+.+ .+++|||++.+.++.+..+++
T Consensus 29 ~~Ing~~v-------~~LVDTGAs~s~Is~~~A~rl 57 (148)
T 3s8i_A 29 CKVNGHPL-------KAFVDSGAQMTIMSQACAERC 57 (148)
T ss_dssp EEETTEEE-------EEEECTTCSSCEEEHHHHHHT
T ss_pred EEECCEEE-------EEEEeCCCCcEeeCHHHHHHc
Confidence 46788765 489999999999999888765
No 66
>1tzs_P Activation peptide from cathepsin E; hydrolase, aspartic protease, activation intermediate; 2.35A {Homo sapiens}
Probab=62.46 E-value=2.6 Score=26.41 Aligned_cols=23 Identities=17% Similarity=0.158 Sum_probs=18.3
Q ss_pred ceEEEeeeecCcchhhhcccCcc
Q 011143 29 GLVRIGLRKKKLDQINRLVGQTV 51 (492)
Q Consensus 29 ~~~ripL~r~~~~~~~~~~~~~~ 51 (492)
+++||||+|.++.++.+.+.+..
T Consensus 2 ~l~rIpL~K~~s~r~~l~~~g~~ 24 (35)
T 1tzs_P 2 SLHRVPLRRHPSLKKKLRARSQL 24 (35)
T ss_pred cEEEEEeEEchHHHHHHHHcccH
Confidence 47899999999988887765543
No 67
>3s64_A AC-SLP-1, saposin-like protein 1; lipid-binding, lipid binding protein; HET: CIT EPE; 2.30A {Ancylostoma caninum}
Probab=60.80 E-value=2.5 Score=33.41 Aligned_cols=38 Identities=26% Similarity=0.396 Sum_probs=32.5
Q ss_pred CCccchhhHHHHHHHHHHhhhcccHHHHHHHHHhhcCCCC
Q 011143 384 DSAMCSACEMAVIWMQNKLRRNETADQILNYVNQLCDRLP 423 (492)
Q Consensus 384 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~c~~~~ 423 (492)
++..|.+|+++|.-++..+.+ +.++|.+++...|..+.
T Consensus 9 ~~l~C~~C~~~Vk~~e~~i~~--~~~eie~~~d~~Ckk~~ 46 (87)
T 3s64_A 9 NVIVCEICKMAVKLIVPEADK--DLDQLEKEFIQGCMTLI 46 (87)
T ss_dssp CTTHHHHHHHHHHHHTTCSSC--SSTTHHHHHHHHHHHHH
T ss_pred CccchHHHHHHHHHHHHhccC--CHHHHHHHHHHHHHHhc
Confidence 567899999999999999875 44479999999997763
No 68
>2hah_A Protease, retropepsin; retroviral, aspartyl, hydrolase-hydrolase complex; HET: 3TL; 1.70A {Feline immunodeficiency virus} PDB: 3ogp_A* 3ogq_A* 2fiv_A* 6fiv_A* 3fiv_A* 5fiv_A* 4fiv_A* 1fiv_A* 1b11_A*
Probab=53.33 E-value=12 Score=31.17 Aligned_cols=26 Identities=12% Similarity=0.181 Sum_probs=22.4
Q ss_pred EEEEEEcCCCceEEEEEeCCCCceeeeCC
Q 011143 90 FGEVSIGTPSQTFTVIFDTGSSNLWVPSA 118 (492)
Q Consensus 90 ~~~I~IGTP~Q~~~v~lDTGSs~~WV~s~ 118 (492)
++ |.|| +|.+..++|||.+++-+...
T Consensus 16 ~v-ikI~--Gq~~eaLLDTGAD~TVi~~~ 41 (116)
T 2hah_A 16 IL-IFVN--GYPIKFLLDTGADITVLNRR 41 (116)
T ss_dssp EE-EEET--TEEEEEEECTTCSSCEEEGG
T ss_pred EE-EEEC--CEEEEEEecCCCCcEEEccc
Confidence 44 9999 69999999999999988753
No 69
>3sqf_A Protease; folded monomer, retropepsin, D-type retrovirus; 1.63A {Mason-pfizer monkey virus} SCOP: b.50.1.1 PDB: 1nso_A
Probab=49.49 E-value=17 Score=30.13 Aligned_cols=29 Identities=14% Similarity=0.151 Sum_probs=25.1
Q ss_pred EEEEEEcCCCceEEEEEeCCCCceeeeCCCC
Q 011143 90 FGEVSIGTPSQTFTVIFDTGSSNLWVPSAKC 120 (492)
Q Consensus 90 ~~~I~IGTP~Q~~~v~lDTGSs~~WV~s~~C 120 (492)
.+++.|| +|.+..++|||.+++-+...+.
T Consensus 11 ~vti~I~--Gq~~eaLLDTGADdTVi~~~~l 39 (114)
T 3sqf_A 11 SLTLWLD--DKMFTGLINTGADVTIIKLEDW 39 (114)
T ss_dssp EEEEEET--TEEEEEEECTTCSSCEEEGGGS
T ss_pred eEEEEEC--CEEEEEEEccCCCceEEecccC
Confidence 5678898 6999999999999999976555
No 70
>1l9l_A Granulysin; saposin fold, membrane-lytic, antimicrobial protein; HET: MPO; 0.92A {Homo sapiens} SCOP: a.64.1.1
Probab=49.07 E-value=3.7 Score=31.30 Aligned_cols=33 Identities=21% Similarity=0.605 Sum_probs=30.1
Q ss_pred eecccccccccchhhHHHHHHhhcCcccccccc
Q 011143 320 ISQECKTLVDQYGKTILEMLIAETQPQKICSQM 352 (492)
Q Consensus 320 ~~~~C~~~~~~fg~~~~~~~~~~~~~~~~~~~~ 352 (492)
+.-.|+..+..|+...++.+++...|+.+|...
T Consensus 41 ~~~~C~~~V~~y~~~Ii~~L~~~~~P~~IC~~i 73 (74)
T 1l9l_A 41 WRDVCRNFMRRYQSRVIQGLVAGETAQQICEDL 73 (74)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHTTCCHHHHHGGG
T ss_pred HHHHHHHHHHHHHHHHHHHHHhCCCHHHHHhhc
Confidence 667899999999999999999999999999764
No 71
>3slz_A GAG-Pro-POL polyprotein; beta sheet and dimer, protease, peptide inhibitor, TL-3 PEPS virus, hydrolase-hydrolase inhibitor complex; HET: 3TL; 1.40A {Dg-75 murine leukemia virus} PDB: 3nr6_A* 3sm1_A* 3sm2_A* 4exh_A*
Probab=43.39 E-value=26 Score=29.74 Aligned_cols=30 Identities=20% Similarity=0.268 Sum_probs=24.9
Q ss_pred eEEEEEEEcCCCceEEEEEeCCCCceeeeCCC
Q 011143 88 QYFGEVSIGTPSQTFTVIFDTGSSNLWVPSAK 119 (492)
Q Consensus 88 ~Y~~~I~IGTP~Q~~~v~lDTGSs~~WV~s~~ 119 (492)
.-.+++.|+ +|.+.+++|||.+++-+....
T Consensus 22 RP~v~i~I~--G~~~~~LlDTGAd~tVl~~~~ 51 (132)
T 3slz_A 22 EPRITLKVG--GQPVTFLVDTGAQHSVLTQNP 51 (132)
T ss_dssp SSEEEEEET--TEEEEEEECTTCSSCEECSCC
T ss_pred CCEEEEEEC--CEEEEEEEeCCCCeEEEcccc
Confidence 447779999 699999999999999886543
No 72
>1bxo_A Protein (penicillopepsin); hydrolase, phosphonate inhibitors, macrocycle; HET: MAN PP7; 0.95A {Penicillium janthinellum} SCOP: b.50.1.2 PDB: 1apu_E* 1apv_E* 1apw_E* 1apt_E* 1bxq_A* 1ppk_E* 1ppl_E* 1ppm_E* 2wea_A* 2web_A* 2wec_A* 2wed_A* 3app_A
Probab=37.70 E-value=30 Score=33.43 Aligned_cols=37 Identities=19% Similarity=0.353 Sum_probs=32.9
Q ss_pred CcccccccccccCCCCcEEEEECCEEEeeCccceEEEec
Q 011143 425 PNGESAVDCDNLSSMPNVSFTIGGKVFDLAPNEVWLYAD 463 (492)
Q Consensus 425 ~~~~~~~~c~~~~~~p~i~~~~~g~~~~l~~~~y~~~~~ 463 (492)
..+.|.++|+. ++|+|+|.|+|++++|++++|+++..
T Consensus 241 ~~g~~~~~C~~--~~P~i~f~fgg~~~~l~~~~~~~~~~ 277 (323)
T 1bxo_A 241 NAGGYVFDCST--NLPDFSVSISGYTATVPGSLINYGPS 277 (323)
T ss_dssp TTTEEEECTTC--CCCCEEEEETTEEEEECHHHHEEEEC
T ss_pred cCCEEEEECCC--CCceEEEEECCEEEEECHHHeEEecc
Confidence 46788999984 79999999999999999999998764
No 73
>3ka2_A [L-Ala51;Gly51']HIV-1 protease; beta-barrel, hydrolase-hydrolase inhibitor complex; HET: YCM 2NC; 1.40A {Synthetic} PDB: 3fsm_A* 3gi0_A* 2o40_A* 3hzc_A* 3hlo_A* 3iaw_A* 3nxe_A* 3nxn_A* 4epj_A 4ep2_A 4ep3_A 4eq0_A 4eqj_A 1hvc_A* 1g6l_A 2whh_A* 1lv1_A* 3dox_A 3kt5_A 3kt2_A ...
Probab=36.75 E-value=28 Score=31.81 Aligned_cols=28 Identities=21% Similarity=0.330 Sum_probs=24.0
Q ss_pred EEEEEEEcCCCceEEEEEeCCCCceeeeCC
Q 011143 89 YFGEVSIGTPSQTFTVIFDTGSSNLWVPSA 118 (492)
Q Consensus 89 Y~~~I~IGTP~Q~~~v~lDTGSs~~WV~s~ 118 (492)
-.++|.|| +|.+.+++|||.+++-+..-
T Consensus 9 P~vtv~I~--Gq~~e~LLDTGAD~TVl~~~ 36 (203)
T 3ka2_A 9 PLVTIRIG--GQLKEALLDTGADDTVIEEL 36 (203)
T ss_dssp CEEEEEET--TEEEEEEECTTCSSCEECSC
T ss_pred CeEEEEEC--CEEEEEEEecCCCceEEecc
Confidence 46789999 69999999999999988643
No 74
>1ibq_A Aspergillopepsin; aspartic proteinase, hydrolase; HET: MAN; 2.14A {Aspergillus phoenicis} SCOP: b.50.1.2
Probab=35.58 E-value=33 Score=33.15 Aligned_cols=39 Identities=13% Similarity=0.212 Sum_probs=33.5
Q ss_pred CCCcccccccccccCCCCcEEEEECCEEEeeCccceEEEec
Q 011143 423 PSPNGESAVDCDNLSSMPNVSFTIGGKVFDLAPNEVWLYAD 463 (492)
Q Consensus 423 ~~~~~~~~~~c~~~~~~p~i~~~~~g~~~~l~~~~y~~~~~ 463 (492)
....+.|.++|+. ++|+|+|.|+|++++|++++|+++..
T Consensus 240 ~~~~g~~~~~C~~--~~P~i~f~fgg~~~~i~~~~~~~~~~ 278 (325)
T 1ibq_A 240 SYEAGGYVFSCST--DLPDFTVVIGDYKAVVPGKYINYAPV 278 (325)
T ss_dssp CSSSSSCEEETTC--CCCCEEEEETTEEEEECHHHHEEEES
T ss_pred cCcCCeEEEEcCC--CCCcEEEEECCEEEEECHHHhccccc
Confidence 3356778999984 79999999999999999999998754
No 75
>1izd_A Aspartic proteinase; sugar binding, acid protease, hydrolase; HET: MAN; 1.90A {Aspergillus oryzae} SCOP: b.50.1.2 PDB: 1ize_A*
Probab=34.66 E-value=36 Score=32.90 Aligned_cols=43 Identities=16% Similarity=0.123 Sum_probs=30.5
Q ss_pred cccEEEecccccceEEEeeeEEEcCeeeeecCCCceEEEcCCcccccccHHHH
Q 011143 255 GEHTYVPVTKKGYWQFEMGDVLIDGETTGYCSTGCNAIADSGTSLLAGPTTII 307 (492)
Q Consensus 255 G~l~~~pv~~~~~w~v~l~~i~vgg~~~~~~~~~~~aiiDTGTt~i~lP~~~~ 307 (492)
|.+...|+.....|.++ |.||.+ ...+++|||++.+++|....
T Consensus 4 ~~v~~~~~~~~~~Y~~~---i~iG~q-------~~~v~~DTGSs~lWv~~~~C 46 (323)
T 1izd_A 4 GSVTTNPTSNDEEYITQ---VTVGDD-------TLGLDFDTGSADLWVFSSQT 46 (323)
T ss_dssp EEEEEEECGGGCCEEEE---EEETTE-------EEEEEEETTCCCEEECBTTS
T ss_pred CceeeeEcCCCCEEEEE---EEECCE-------EEEEEEcCCCcceEEecCCC
Confidence 55556676666667654 678833 34699999999999997543
No 76
>2rsp_A RSV protease; hydrolase(aspartyl proteinase); 2.00A {Rous sarcoma virus} SCOP: b.50.1.1 PDB: 1mvp_A 1bai_A*
Probab=32.87 E-value=38 Score=28.36 Aligned_cols=24 Identities=17% Similarity=0.224 Sum_probs=19.8
Q ss_pred EcCCCceEEEEEeCCCCceeeeCCCC
Q 011143 95 IGTPSQTFTVIFDTGSSNLWVPSAKC 120 (492)
Q Consensus 95 IGTP~Q~~~v~lDTGSs~~WV~s~~C 120 (492)
|| +|.+..++|||.+++-+.....
T Consensus 27 i~--gq~~eaLLDTGAD~TVl~~~~l 50 (124)
T 2rsp_A 27 QR--SVYITALLDSGADITIISEEDW 50 (124)
T ss_dssp CS--EEEEEEEECTTCSSCEEETTTS
T ss_pred CC--CEEEEEEecCCCCcEEEecccC
Confidence 55 5888999999999999986554
No 77
>1lya_A Cathepsin D; lysosomal aspartic protease; HET: NAG BMA MAN; 2.50A {Homo sapiens} SCOP: b.50.1.2 PDB: 1lyb_A* 1lyw_A*
Probab=32.15 E-value=30 Score=27.34 Aligned_cols=33 Identities=18% Similarity=0.189 Sum_probs=22.4
Q ss_pred ccceEEEeeeEEEcCeeeeecCCCceEEEcCCcccccccHH
Q 011143 265 KGYWQFEMGDVLIDGETTGYCSTGCNAIADSGTSLLAGPTT 305 (492)
Q Consensus 265 ~~~w~v~l~~i~vgg~~~~~~~~~~~aiiDTGTt~i~lP~~ 305 (492)
+..|.+ .|.||.- .....++||||++.+++|..
T Consensus 12 ~~~Y~~---~i~iGTP-----~Q~~~v~~DTGSs~lWv~~~ 44 (97)
T 1lya_A 12 DAQYYG---EIGIGTP-----PQCFTVVFDTGSSNLWVPSI 44 (97)
T ss_dssp TTEEEE---EEEETTT-----TEEEEEEEETTCCCEEEEBT
T ss_pred CCeEEE---EEEECCC-----CeEEEEEEeCCCCceEEeEc
Confidence 344554 3677742 22456999999999999853
No 78
>1mpp_A Pepsin; hydrolase(acid proteinase); 2.00A {Rhizomucor pusillus} SCOP: b.50.1.2 PDB: 2asi_A* 2rmp_A*
Probab=27.06 E-value=54 Score=32.07 Aligned_cols=44 Identities=16% Similarity=0.095 Sum_probs=29.8
Q ss_pred ccccEEEeccc--ccceEEEeeeEEEcCeeeeecCCCceEEEcCCcccccccHH
Q 011143 254 KGEHTYVPVTK--KGYWQFEMGDVLIDGETTGYCSTGCNAIADSGTSLLAGPTT 305 (492)
Q Consensus 254 ~G~l~~~pv~~--~~~w~v~l~~i~vgg~~~~~~~~~~~aiiDTGTt~i~lP~~ 305 (492)
+|.+...|+.. ...|.+. |.||.- .....+++|||++.+++|..
T Consensus 4 ~g~~~~~~l~~~~~~~Y~~~---i~iGtP-----~q~~~v~~DTGSs~~Wv~~~ 49 (361)
T 1mpp_A 4 DGSVDTPGLYDFDLEEYAIP---VSIGTP-----GQDFYLLFDTGSSDTWVPHK 49 (361)
T ss_dssp -CCEEEEEEEETTTTEEEEE---EEETTT-----TEEEEEEEETTCCCCEEEBT
T ss_pred CCccceEEeecCCCCEEEEE---EEECCC-----CcEEEEEEcCCCCCeEECCC
Confidence 45666777764 4556554 677742 22346999999999999865
No 79
>3s64_A AC-SLP-1, saposin-like protein 1; lipid-binding, lipid binding protein; HET: CIT EPE; 2.30A {Ancylostoma caninum}
Probab=26.68 E-value=11 Score=29.60 Aligned_cols=51 Identities=24% Similarity=0.365 Sum_probs=38.7
Q ss_pred HHHHHHHHHh-CCCcceecccccccccchhhHHHHHHhhcCccccccccccc
Q 011143 305 TIITQINHAI-GASGVISQECKTLVDQYGKTILEMLIAETQPQKICSQMGLC 355 (492)
Q Consensus 305 ~~~~~l~~~i-~a~~~~~~~C~~~~~~fg~~~~~~~~~~~~~~~~~~~~~~c 355 (492)
..+++.=+.+ ++.+.-.-.|+..+..+.+.+++.+-+...|+++|...+.|
T Consensus 36 ~~~d~~Ckk~~~~ip~a~k~C~~~v~~~~d~II~eLe~g~~P~~VC~~L~~C 87 (87)
T 3s64_A 36 KEFIQGCMTLIGWLPYAEKECKALAKIEMGAIKTLLENGSAPEEICTTLHAC 87 (87)
T ss_dssp HHHHHHHHHHHCSSTTHHHHHHHHHHHHHHHHHHHHHTTCCTTTHHHHHHCC
T ss_pred HHHHHHHHHhcccCCchHHHHHHHHHHhHHHHHHHHHcCCCHHHHHHHhccC
Confidence 3344444444 43433445799999999999999999999999999998887
No 80
>1oew_A Endothiapepsin; hydrolase, aspartic proteinase mechanism, atomic resolution, succinimide, anisotropic refinement; HET: SUI; 0.9A {Cryphonectria parasitica} SCOP: b.50.1.2 PDB: 1gkt_A* 1gvt_A* 1gvv_A* 1gvw_A* 1gvx_A* 1gvu_A* 1oex_A* 2jji_A* 2jjj_A* 2vs2_A* 3uri_A* 3urj_A* 3url_A* 3pww_A* 1e80_E* 1e81_E* 1e82_E* 1e5o_E* 1eed_P* 1epl_E* ...
Probab=23.59 E-value=68 Score=30.93 Aligned_cols=37 Identities=14% Similarity=0.297 Sum_probs=32.5
Q ss_pred CcccccccccccCCCCcEEEEECCEEEeeCccceEEEec
Q 011143 425 PNGESAVDCDNLSSMPNVSFTIGGKVFDLAPNEVWLYAD 463 (492)
Q Consensus 425 ~~~~~~~~c~~~~~~p~i~~~~~g~~~~l~~~~y~~~~~ 463 (492)
..+.|.++|+. .+|+|+|.|+|++++|++++|+++..
T Consensus 246 ~~g~~~~~C~~--~~P~i~f~fgg~~~~ip~~~~~~~~~ 282 (329)
T 1oew_A 246 SVGGYVFPCSA--TLPSFTFGVGSARIVIPGDYIDFGPI 282 (329)
T ss_dssp TTTEEEEETTC--CCCCEEEEETTEEEEECHHHHEEEES
T ss_pred CCCEEEEECCC--CCCcEEEEECCEEEEECHHHeeeeec
Confidence 45778899984 79999999999999999999998753
No 81
>1fmb_A EIAV protease; hydrolase (acid proteinase), RNA-directed DNA polymerase, AS protease, endonuclease, polyprotein; HET: HYB; 1.80A {Equine infectious anemia virus} SCOP: b.50.1.1 PDB: 2fmb_A*
Probab=23.15 E-value=47 Score=26.80 Aligned_cols=35 Identities=20% Similarity=0.139 Sum_probs=26.5
Q ss_pred eEEEeeeEEEcCeeeeecCCCceEEEcCCcccccccHHHHHH
Q 011143 268 WQFEMGDVLIDGETTGYCSTGCNAIADSGTSLLAGPTTIITQ 309 (492)
Q Consensus 268 w~v~l~~i~vgg~~~~~~~~~~~aiiDTGTt~i~lP~~~~~~ 309 (492)
|+=.+-.+.|+|+.. .+++|||+-.+.+.......
T Consensus 6 ~~RP~v~v~I~Gq~~-------e~LLDTGAD~TVl~~~~w~~ 40 (104)
T 1fmb_A 6 EKRPTTIVLINDTPL-------NVLLDTGADTSVLTTAHYNR 40 (104)
T ss_dssp SSCCEEEEEETTEEE-------EEEECTTCSSCEEEHHHHHH
T ss_pred cCCCEEEEEECCEEE-------EEEeccCCCcEEEccccCcc
Confidence 444455688999865 48999999999999776643
No 82
>3c9x_A Trichoderma reesei aspartic protease; aspartic proteinase, aspartyl protease, hydrolase; 1.70A {Trichoderma reesei} PDB: 3c9y_A* 3emy_A*
Probab=22.41 E-value=74 Score=30.65 Aligned_cols=38 Identities=21% Similarity=0.387 Sum_probs=32.8
Q ss_pred CcccccccccccCCCCcEEEEECCEEEeeCccceEEEecC
Q 011143 425 PNGESAVDCDNLSSMPNVSFTIGGKVFDLAPNEVWLYADF 464 (492)
Q Consensus 425 ~~~~~~~~c~~~~~~p~i~~~~~g~~~~l~~~~y~~~~~~ 464 (492)
..+.|.++|+ ..+|+|+|.|+|++++|++++|+++...
T Consensus 247 ~~~~~~~~C~--~~~P~i~f~f~g~~~~ip~~~~~~~~~~ 284 (329)
T 3c9x_A 247 QQEGVVFDCD--EDLPSFSFGVGSSTITIPGDLLNLTPLE 284 (329)
T ss_dssp TTTEEEEETT--CCCCCEEEEETTEEEEECGGGGEEEESS
T ss_pred CCCEEEEECC--CCCCcEEEEECCEEEEECHHHeeeeccC
Confidence 4577889998 4799999999999999999999987543
No 83
>2apr_A Rhizopuspepsin; hydrolase (aspartic proteinase); 1.80A {Rhizopus microsporus var} SCOP: b.50.1.2 PDB: 3apr_E* 4apr_E* 5apr_E* 6apr_E* 1uh9_A 1uh8_A 1uh7_A
Probab=21.68 E-value=86 Score=30.13 Aligned_cols=36 Identities=25% Similarity=0.580 Sum_probs=31.5
Q ss_pred ccccccccccCCCCcEEEEECCEEEeeCccceEEEec
Q 011143 427 GESAVDCDNLSSMPNVSFTIGGKVFDLAPNEVWLYAD 463 (492)
Q Consensus 427 ~~~~~~c~~~~~~p~i~~~~~g~~~~l~~~~y~~~~~ 463 (492)
+.|.++|+. ..+|+|+|.|+|.+++|++++|+++..
T Consensus 246 g~~~~~C~~-~~~p~i~f~f~g~~~~ip~~~~~~~~~ 281 (325)
T 2apr_A 246 GTYTISCDT-SAFKPLVFSINGASFQVSPDSLVFEEF 281 (325)
T ss_dssp SCEEECSCG-GGCCCEEEEETTEEEEECGGGGEEEEE
T ss_pred CeEEEECCC-CCCCcEEEEECCEEEEECHHHEEEcCC
Confidence 678999985 348999999999999999999998754
No 84
>1b5f_A Protein (cardosin A); hydrolase, aspartic proteinase; HET: NAG FUC BMA MAN; 1.72A {Cynara cardunculus} SCOP: b.50.1.2
Probab=20.53 E-value=96 Score=28.39 Aligned_cols=39 Identities=26% Similarity=0.240 Sum_probs=27.2
Q ss_pred eEeccccCCceEEEE---EEEcCC-----CceEEEEEeCCCCceeeeCC
Q 011143 78 IVALNNFMDAQYFGE---VSIGTP-----SQTFTVIFDTGSSNLWVPSA 118 (492)
Q Consensus 78 ~~pl~n~~d~~Y~~~---I~IGTP-----~Q~~~v~lDTGSs~~WV~s~ 118 (492)
.+|+.+ ...|.++ |.||.- .....+++|||++.+++|..
T Consensus 181 ~~p~~~--~~~~~v~l~~i~v~~~~~~~~~~~~~aiiDTGTt~~~lP~~ 227 (239)
T 1b5f_A 181 YVPVTY--QYYWQFGIGDVLIGDKSTGFCAPGCQAFADSGTSLLSGPTA 227 (239)
T ss_dssp EEEEEE--ETTEEEEECCEEETTEECCTTTTCEEEEECTTCSSEEECHH
T ss_pred EEEccc--CCeEEEEeeEEEECCEEecccCCCCEEEEecCcchhhCCHH
Confidence 456654 2456654 778752 34578999999999999854
Done!