BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 011145
(492 letters)
Database: pdbaa
62,578 sequences; 14,973,337 total letters
Searching..................................................done
>pdb|3GNO|A Chain A, Crystal Structure Of A Rice Os3bglu6 Beta-glucosidase
pdb|3GNP|A Chain A, Crystal Structure Of A Rice Os3bglu6 Beta-Glucosidase With
Octyl-Beta- D-Thio-Glucoside
pdb|3GNR|A Chain A, Crystal Structure Of A Rice Os3bglu6 Beta-glucosidase With
Covalently Bound 2-deoxy-2-fluoroglucoside To The
Catalytic Nucleophile E396
Length = 488
Score = 504 bits (1297), Expect = e-143, Method: Compositional matrix adjust.
Identities = 245/483 (50%), Positives = 325/483 (67%), Gaps = 16/483 (3%)
Query: 13 QAEPRNVSKTDFPPNFVFGVATSAYQIEGACEEGNRGASIWDDFTHTEGKIIDKSNGDVA 72
Q +++ FP FVFG A++AYQ EGA +E RG +IWD F HT GKI D SN DVA
Sbjct: 6 QQSGGGLTRGSFPEGFVFGTASAAYQYEGAVKEDGRGQTIWDTFAHTFGKITDFSNADVA 65
Query: 73 VDHYHRYKEDIDLIAKLGFDAYRFSISWSRIFPDGLGTKINMEGITFYNNIIDALLQKGI 132
VD YHR++EDI L+A +G DAYRFSI+WSRI+P+G+G ++N GI YN +IDALL KGI
Sbjct: 66 VDQYHRFEEDIQLMADMGMDAYRFSIAWSRIYPNGVG-QVNQAGIDHYNKLIDALLAKGI 124
Query: 133 QPYVTLYHWDLPLHLHESMGGWLNKEIVKYFEIYADTCFASFGDRVKNWITINEPLQTAV 192
QPYVTLYHWDLP L + GWL+++IV F YA+TCF FGDRVK+WIT+NEP A+
Sbjct: 125 QPYVTLYHWDLPQALEDKYKGWLDRQIVDDFAAYAETCFREFGDRVKHWITLNEPHTVAI 184
Query: 193 NGYCTGIFAPGRHQ----------HSSTEPYLVAHHQILAHAAAFSVYQRKYKDKQGGNI 242
GY G+ APGR +S TEPY+VAHH ILAHAAA S+Y+ KYK Q G +
Sbjct: 185 QGYDAGLQAPGRCSVLLHLYCKAGNSGTEPYVVAHHFILAHAAAASIYRTKYKATQNGQL 244
Query: 243 GLVVDCEWAEANSDKIEDKSAAARRLDFQIGWYLHPIYYGDYPEVMRNNLGDQLPKFMQK 302
G+ D W E S+ D AA R +FQ+GW+ P ++GDYP MR +G++LP+F
Sbjct: 245 GIAFDVMWFEPMSNTTIDIEAAKRAQEFQLGWFADPFFFGDYPATMRARVGERLPRFTAD 304
Query: 303 DKELVRNSLDFVGLNHYTSRFIAHATKSPEEGSFYE---AQEMERLVEWEGGEVIGEKAA 359
+ +V+ +LDFVG+NHYT+ + H + G+ A + ++ G+ IG++A
Sbjct: 305 EAAVVKGALDFVGINHYTTYYTRH-NNTNIIGTLLNNTLADTGTVSLPFKNGKPIGDRAN 363
Query: 360 SEWLYVVPWGLRKVLNYIAKTYNNPPIYVTENGMDDEENDSSPLHEMLDDKLRVRYFKGY 419
S WLY+VP G+R ++NY+ + YN+PP+Y+TENGMDD N + + L D R++Y Y
Sbjct: 364 SIWLYIVPRGMRSLMNYVKERYNSPPVYITENGMDDSNNPFISIKDALKDSKRIKYHNDY 423
Query: 420 LSAVAQAIK-DGADVRGYFVWSLLDNFEWAQGYTKRFGLVYVDYKNGLVRHPKSSAYWFM 478
L+ +A +IK DG DVRGYF WSLLDN+EWA GY+ RFGL +VDYK+ L R+PK+S WF
Sbjct: 424 LTNLAASIKEDGCDVRGYFAWSLLDNWEWAAGYSSRFGLYFVDYKDNLKRYPKNSVQWFK 483
Query: 479 RFL 481
L
Sbjct: 484 ALL 486
>pdb|2RGL|A Chain A, Rice Bglu1 Beta-Glucosidase, A Plant
ExoglucanaseBETA-Glucosidase
pdb|2RGL|B Chain B, Rice Bglu1 Beta-Glucosidase, A Plant
ExoglucanaseBETA-Glucosidase
pdb|2RGM|A Chain A, Rice Bglu1 Beta-Glucosidase, A Plant
ExoglucanaseBETA-Glucosidase
pdb|2RGM|B Chain B, Rice Bglu1 Beta-Glucosidase, A Plant
ExoglucanaseBETA-Glucosidase
Length = 481
Score = 488 bits (1257), Expect = e-138, Method: Compositional matrix adjust.
Identities = 237/469 (50%), Positives = 312/469 (66%), Gaps = 10/469 (2%)
Query: 19 VSKTDFPPNFVFGVATSAYQIEGACEEGNRGASIWDDFTHTEGKIIDKSNGDVAVDHYHR 78
+S+ FP FVFG TSAYQ+EG G RG SIWD F HT G + NGDVA D YHR
Sbjct: 15 LSRAAFPKRFVFGTVTSAYQVEGMAASGGRGPSIWDAFAHTPGNVAGNQNGDVATDQYHR 74
Query: 79 YKEDIDLIAKLGFDAYRFSISWSRIFPDGLGTKINMEGITFYNNIIDALLQKGIQPYVTL 138
YKED++L+ L FDAYRFSISWSRIFPDG G ++N EG+ +YNN+I+ LLQKGI PYV L
Sbjct: 75 YKEDVNLMKSLNFDAYRFSISWSRIFPDGEG-RVNQEGVAYYNNLINYLLQKGITPYVNL 133
Query: 139 YHWDLPLHLHESMGGWLNKEIVKYFEIYADTCFASFGDRVKNWITINEPLQTAVNGYCTG 198
YH+DLPL L + GGWLN ++ F YAD CF +FG+RVK+W T NEP A+ GY G
Sbjct: 134 YHYDLPLALEKKYGGWLNAKMADLFTEYADFCFKTFGNRVKHWFTFNEPRIVALLGYDQG 193
Query: 199 IFAPGRHQ------HSSTEPYLVAHHQILAHAAAFSVYQRKYKDKQGGNIGLVVDCEWAE 252
P R +S+TEPY+VAH+ +L+HAAA + Y+ KY+ Q G +G+V+D W E
Sbjct: 194 TNPPKRCTKCAAGGNSATEPYIVAHNFLLSHAAAVARYRTKYQAAQQGKVGIVLDFNWYE 253
Query: 253 ANSDKIEDKSAAARRLDFQIGWYLHPIYYGDYPEVMRNNLGDQLPKFMQKDKELVRNSLD 312
A S+ ED++AA R DF IGWYL P+ G YP++M++ + D+LPKF + LV+ S D
Sbjct: 254 ALSNSTEDQAAAQRARDFHIGWYLDPLINGHYPQIMQDLVKDRLPKFTPEQARLVKGSAD 313
Query: 313 FVGLNHYTSRFIAHATKSPEEGSFYEAQEMERLVEWEGGEVIGEKAASEWLYVVPWGLRK 372
++G+N YT+ ++ + + Y A V + G+ IG +A S WLY+VPWG+
Sbjct: 314 YIGINQYTASYMKGQQLMQQTPTSYSADWQVTYVFAKNGKPIGPQANSNWLYIVPWGMYG 373
Query: 373 VLNYIAKTYNNPPIYVTENGMDDEENDSSPLHEMLDDKLRVRYFKGYLSAVAQAIKDGAD 432
+NYI + Y NP + +TENGMD N S + L D RV +++ YL+ + +AI +GA+
Sbjct: 374 CVNYIKQKYGNPTVVITENGMDQPANLSR--DQYLRDTTRVHFYRSYLTQLKKAIDEGAN 431
Query: 433 VRGYFVWSLLDNFEWAQGYTKRFGLVYVDYKNGLVRHPKSSAYWFMRFL 481
V GYF WSLLDNFEW GYT +FG+VYVD+ N L RHPK+SAYWF L
Sbjct: 432 VAGYFAWSLLDNFEWLSGYTSKFGIVYVDF-NTLERHPKASAYWFRDML 479
>pdb|3F4V|A Chain A, Semi-Active E176q Mutant Of Rice Bglu1, A Plant
ExoglucanaseBETA- Glucosidase
pdb|3F4V|B Chain B, Semi-Active E176q Mutant Of Rice Bglu1, A Plant
ExoglucanaseBETA- Glucosidase
pdb|3F5J|A Chain A, Semi-Active E176q Mutant Of Rice Bglu1, A Plant
ExoglucanaseBETA- Glucosidase
pdb|3F5J|B Chain B, Semi-Active E176q Mutant Of Rice Bglu1, A Plant
ExoglucanaseBETA- Glucosidase
pdb|3F5K|A Chain A, Semi-Active E176q Mutant Of Rice Bglu1, A Plant
ExoglucanaseBETA- Glucosidase
pdb|3F5K|B Chain B, Semi-Active E176q Mutant Of Rice Bglu1, A Plant
ExoglucanaseBETA- Glucosidase
pdb|3F5L|A Chain A, Semi-Active E176q Mutant Of Rice Bglu1, A Plant
ExoglucanaseBETA- Glucosidase
pdb|3F5L|B Chain B, Semi-Active E176q Mutant Of Rice Bglu1, A Plant
ExoglucanaseBETA- Glucosidase
pdb|3AHT|A Chain A, Crystal Structure Of Rice Bglu1 E176q Mutant In Complex
With Laminaribiose
pdb|3AHT|B Chain B, Crystal Structure Of Rice Bglu1 E176q Mutant In Complex
With Laminaribiose
pdb|3AHV|A Chain A, Semi-Active E176q Mutant Of Rice Bglu1 Covalent Complex
With 2-Deoxy- 2-Fluoroglucoside
pdb|3AHV|B Chain B, Semi-Active E176q Mutant Of Rice Bglu1 Covalent Complex
With 2-Deoxy- 2-Fluoroglucoside
Length = 481
Score = 488 bits (1255), Expect = e-138, Method: Compositional matrix adjust.
Identities = 236/469 (50%), Positives = 312/469 (66%), Gaps = 10/469 (2%)
Query: 19 VSKTDFPPNFVFGVATSAYQIEGACEEGNRGASIWDDFTHTEGKIIDKSNGDVAVDHYHR 78
+S+ FP FVFG TSAYQ+EG G RG SIWD F HT G + NGDVA D YHR
Sbjct: 15 LSRAAFPKRFVFGTVTSAYQVEGMAASGGRGPSIWDAFAHTPGNVAGNQNGDVATDQYHR 74
Query: 79 YKEDIDLIAKLGFDAYRFSISWSRIFPDGLGTKINMEGITFYNNIIDALLQKGIQPYVTL 138
YKED++L+ L FDAYRFSISWSRIFPDG G ++N EG+ +YNN+I+ LLQKGI PYV L
Sbjct: 75 YKEDVNLMKSLNFDAYRFSISWSRIFPDGEG-RVNQEGVAYYNNLINYLLQKGITPYVNL 133
Query: 139 YHWDLPLHLHESMGGWLNKEIVKYFEIYADTCFASFGDRVKNWITINEPLQTAVNGYCTG 198
YH+DLPL L + GGWLN ++ F YAD CF +FG+RVK+W T N+P A+ GY G
Sbjct: 134 YHYDLPLALEKKYGGWLNAKMADLFTEYADFCFKTFGNRVKHWFTFNQPRIVALLGYDQG 193
Query: 199 IFAPGRHQ------HSSTEPYLVAHHQILAHAAAFSVYQRKYKDKQGGNIGLVVDCEWAE 252
P R +S+TEPY+VAH+ +L+HAAA + Y+ KY+ Q G +G+V+D W E
Sbjct: 194 TNPPKRCTKCAAGGNSATEPYIVAHNFLLSHAAAVARYRTKYQAAQQGKVGIVLDFNWYE 253
Query: 253 ANSDKIEDKSAAARRLDFQIGWYLHPIYYGDYPEVMRNNLGDQLPKFMQKDKELVRNSLD 312
A S+ ED++AA R DF IGWYL P+ G YP++M++ + D+LPKF + LV+ S D
Sbjct: 254 ALSNSTEDQAAAQRARDFHIGWYLDPLINGHYPQIMQDLVKDRLPKFTPEQARLVKGSAD 313
Query: 313 FVGLNHYTSRFIAHATKSPEEGSFYEAQEMERLVEWEGGEVIGEKAASEWLYVVPWGLRK 372
++G+N YT+ ++ + + Y A V + G+ IG +A S WLY+VPWG+
Sbjct: 314 YIGINQYTASYMKGQQLMQQTPTSYSADWQVTYVFAKNGKPIGPQANSNWLYIVPWGMYG 373
Query: 373 VLNYIAKTYNNPPIYVTENGMDDEENDSSPLHEMLDDKLRVRYFKGYLSAVAQAIKDGAD 432
+NYI + Y NP + +TENGMD N S + L D RV +++ YL+ + +AI +GA+
Sbjct: 374 CVNYIKQKYGNPTVVITENGMDQPANLSR--DQYLRDTTRVHFYRSYLTQLKKAIDEGAN 431
Query: 433 VRGYFVWSLLDNFEWAQGYTKRFGLVYVDYKNGLVRHPKSSAYWFMRFL 481
V GYF WSLLDNFEW GYT +FG+VYVD+ N L RHPK+SAYWF L
Sbjct: 432 VAGYFAWSLLDNFEWLSGYTSKFGIVYVDF-NTLERHPKASAYWFRDML 479
>pdb|3SCR|A Chain A, Crystal Structure Of Rice Bglu1 E386s Mutant
pdb|3SCR|B Chain B, Crystal Structure Of Rice Bglu1 E386s Mutant
pdb|3SCS|A Chain A, Crystal Structure Of Rice Bglu1 E386s Mutant Complexed
With Alpha- Glucosyl Fluoride
pdb|3SCS|B Chain B, Crystal Structure Of Rice Bglu1 E386s Mutant Complexed
With Alpha- Glucosyl Fluoride
Length = 481
Score = 487 bits (1253), Expect = e-138, Method: Compositional matrix adjust.
Identities = 236/469 (50%), Positives = 311/469 (66%), Gaps = 10/469 (2%)
Query: 19 VSKTDFPPNFVFGVATSAYQIEGACEEGNRGASIWDDFTHTEGKIIDKSNGDVAVDHYHR 78
+S+ FP FVFG TSAYQ+EG G RG SIWD F HT G + NGDVA D YHR
Sbjct: 15 LSRAAFPKRFVFGTVTSAYQVEGMAASGGRGPSIWDAFAHTPGNVAGNQNGDVATDQYHR 74
Query: 79 YKEDIDLIAKLGFDAYRFSISWSRIFPDGLGTKINMEGITFYNNIIDALLQKGIQPYVTL 138
YKED++L+ L FDAYRFSISWSRIFPDG G ++N EG+ +YNN+I+ LLQKGI PYV L
Sbjct: 75 YKEDVNLMKSLNFDAYRFSISWSRIFPDGEG-RVNQEGVAYYNNLINYLLQKGITPYVNL 133
Query: 139 YHWDLPLHLHESMGGWLNKEIVKYFEIYADTCFASFGDRVKNWITINEPLQTAVNGYCTG 198
YH+DLPL L + GGWLN ++ F YAD CF +FG+RVK+W T NEP A+ GY G
Sbjct: 134 YHYDLPLALEKKYGGWLNAKMADLFTEYADFCFKTFGNRVKHWFTFNEPRIVALLGYDQG 193
Query: 199 IFAPGRHQ------HSSTEPYLVAHHQILAHAAAFSVYQRKYKDKQGGNIGLVVDCEWAE 252
P R +S+TEPY+VAH+ +L+HAAA + Y+ KY+ Q G +G+V+D W E
Sbjct: 194 TNPPKRCTKCAAGGNSATEPYIVAHNFLLSHAAAVARYRTKYQAAQQGKVGIVLDFNWYE 253
Query: 253 ANSDKIEDKSAAARRLDFQIGWYLHPIYYGDYPEVMRNNLGDQLPKFMQKDKELVRNSLD 312
A S+ ED++AA R DF IGWYL P+ G YP++M++ + D+LPKF + LV+ S D
Sbjct: 254 ALSNSTEDQAAAQRARDFHIGWYLDPLINGHYPQIMQDLVKDRLPKFTPEQARLVKGSAD 313
Query: 313 FVGLNHYTSRFIAHATKSPEEGSFYEAQEMERLVEWEGGEVIGEKAASEWLYVVPWGLRK 372
++G+N YT+ ++ + + Y A V + G+ IG +A S WLY+VPWG+
Sbjct: 314 YIGINQYTASYMKGQQLMQQTPTSYSADWQVTYVFAKNGKPIGPQANSNWLYIVPWGMYG 373
Query: 373 VLNYIAKTYNNPPIYVTENGMDDEENDSSPLHEMLDDKLRVRYFKGYLSAVAQAIKDGAD 432
+NYI + Y NP + +T NGMD N S + L D RV +++ YL+ + +AI +GA+
Sbjct: 374 CVNYIKQKYGNPTVVITSNGMDQPANLSR--DQYLRDTTRVHFYRSYLTQLKKAIDEGAN 431
Query: 433 VRGYFVWSLLDNFEWAQGYTKRFGLVYVDYKNGLVRHPKSSAYWFMRFL 481
V GYF WSLLDNFEW GYT +FG+VYVD+ N L RHPK+SAYWF L
Sbjct: 432 VAGYFAWSLLDNFEWLSGYTSKFGIVYVDF-NTLERHPKASAYWFRDML 479
>pdb|3SCP|A Chain A, Crystal Structure Of Rice Bglu1 E386a Mutant
pdb|3SCP|B Chain B, Crystal Structure Of Rice Bglu1 E386a Mutant
pdb|3SCQ|A Chain A, Crystal Structure Of Rice Bglu1 E386a Mutant Complexed
With Alpha- Glucosyl Fluoride
pdb|3SCQ|B Chain B, Crystal Structure Of Rice Bglu1 E386a Mutant Complexed
With Alpha- Glucosyl Fluoride
Length = 481
Score = 487 bits (1253), Expect = e-138, Method: Compositional matrix adjust.
Identities = 236/469 (50%), Positives = 311/469 (66%), Gaps = 10/469 (2%)
Query: 19 VSKTDFPPNFVFGVATSAYQIEGACEEGNRGASIWDDFTHTEGKIIDKSNGDVAVDHYHR 78
+S+ FP FVFG TSAYQ+EG G RG SIWD F HT G + NGDVA D YHR
Sbjct: 15 LSRAAFPKRFVFGTVTSAYQVEGMAASGGRGPSIWDAFAHTPGNVAGNQNGDVATDQYHR 74
Query: 79 YKEDIDLIAKLGFDAYRFSISWSRIFPDGLGTKINMEGITFYNNIIDALLQKGIQPYVTL 138
YKED++L+ L FDAYRFSISWSRIFPDG G ++N EG+ +YNN+I+ LLQKGI PYV L
Sbjct: 75 YKEDVNLMKSLNFDAYRFSISWSRIFPDGEG-RVNQEGVAYYNNLINYLLQKGITPYVNL 133
Query: 139 YHWDLPLHLHESMGGWLNKEIVKYFEIYADTCFASFGDRVKNWITINEPLQTAVNGYCTG 198
YH+DLPL L + GGWLN ++ F YAD CF +FG+RVK+W T NEP A+ GY G
Sbjct: 134 YHYDLPLALEKKYGGWLNAKMADLFTEYADFCFKTFGNRVKHWFTFNEPRIVALLGYDQG 193
Query: 199 IFAPGRHQ------HSSTEPYLVAHHQILAHAAAFSVYQRKYKDKQGGNIGLVVDCEWAE 252
P R +S+TEPY+VAH+ +L+HAAA + Y+ KY+ Q G +G+V+D W E
Sbjct: 194 TNPPKRCTKCAAGGNSATEPYIVAHNFLLSHAAAVARYRTKYQAAQQGKVGIVLDFNWYE 253
Query: 253 ANSDKIEDKSAAARRLDFQIGWYLHPIYYGDYPEVMRNNLGDQLPKFMQKDKELVRNSLD 312
A S+ ED++AA R DF IGWYL P+ G YP++M++ + D+LPKF + LV+ S D
Sbjct: 254 ALSNSTEDQAAAQRARDFHIGWYLDPLINGHYPQIMQDLVKDRLPKFTPEQARLVKGSAD 313
Query: 313 FVGLNHYTSRFIAHATKSPEEGSFYEAQEMERLVEWEGGEVIGEKAASEWLYVVPWGLRK 372
++G+N YT+ ++ + + Y A V + G+ IG +A S WLY+VPWG+
Sbjct: 314 YIGINQYTASYMKGQQLMQQTPTSYSADWQVTYVFAKNGKPIGPQANSNWLYIVPWGMYG 373
Query: 373 VLNYIAKTYNNPPIYVTENGMDDEENDSSPLHEMLDDKLRVRYFKGYLSAVAQAIKDGAD 432
+NYI + Y NP + +T NGMD N S + L D RV +++ YL+ + +AI +GA+
Sbjct: 374 CVNYIKQKYGNPTVVITANGMDQPANLSR--DQYLRDTTRVHFYRSYLTQLKKAIDEGAN 431
Query: 433 VRGYFVWSLLDNFEWAQGYTKRFGLVYVDYKNGLVRHPKSSAYWFMRFL 481
V GYF WSLLDNFEW GYT +FG+VYVD+ N L RHPK+SAYWF L
Sbjct: 432 VAGYFAWSLLDNFEWLSGYTSKFGIVYVDF-NTLERHPKASAYWFRDML 479
>pdb|3SCW|A Chain A, Crystal Structure Of Rice Bglu1 E386gY341A MUTANT
COMPLEXED WITH Cellotetraose
pdb|3SCW|B Chain B, Crystal Structure Of Rice Bglu1 E386gY341A MUTANT
COMPLEXED WITH Cellotetraose
Length = 481
Score = 486 bits (1251), Expect = e-137, Method: Compositional matrix adjust.
Identities = 236/469 (50%), Positives = 311/469 (66%), Gaps = 10/469 (2%)
Query: 19 VSKTDFPPNFVFGVATSAYQIEGACEEGNRGASIWDDFTHTEGKIIDKSNGDVAVDHYHR 78
+S+ FP FVFG TSAYQ+EG G RG SIWD F HT G + NGDVA D YHR
Sbjct: 15 LSRAAFPKRFVFGTVTSAYQVEGMAASGGRGPSIWDAFAHTPGNVAGNQNGDVATDQYHR 74
Query: 79 YKEDIDLIAKLGFDAYRFSISWSRIFPDGLGTKINMEGITFYNNIIDALLQKGIQPYVTL 138
YKED++L+ L FDAYRFSISWSRIFPDG G ++N EG+ +YNN+I+ LLQKGI PYV L
Sbjct: 75 YKEDVNLMKSLNFDAYRFSISWSRIFPDGEG-RVNQEGVAYYNNLINYLLQKGITPYVNL 133
Query: 139 YHWDLPLHLHESMGGWLNKEIVKYFEIYADTCFASFGDRVKNWITINEPLQTAVNGYCTG 198
YH+DLPL L + GGWLN ++ F YAD CF +FG+RVK+W T NEP A+ GY G
Sbjct: 134 YHYDLPLALEKKYGGWLNAKMADLFTEYADFCFKTFGNRVKHWFTFNEPRIVALLGYDQG 193
Query: 199 IFAPGRHQ------HSSTEPYLVAHHQILAHAAAFSVYQRKYKDKQGGNIGLVVDCEWAE 252
P R +S+TEPY+VAH+ +L+HAAA + Y+ KY+ Q G +G+V+D W E
Sbjct: 194 TNPPKRCTKCAAGGNSATEPYIVAHNFLLSHAAAVARYRTKYQAAQQGKVGIVLDFNWYE 253
Query: 253 ANSDKIEDKSAAARRLDFQIGWYLHPIYYGDYPEVMRNNLGDQLPKFMQKDKELVRNSLD 312
A S+ ED++AA R DF IGWYL P+ G YP++M++ + D+LPKF + LV+ S D
Sbjct: 254 ALSNSTEDQAAAQRARDFHIGWYLDPLINGHYPQIMQDLVKDRLPKFTPEQARLVKGSAD 313
Query: 313 FVGLNHYTSRFIAHATKSPEEGSFYEAQEMERLVEWEGGEVIGEKAASEWLYVVPWGLRK 372
++G+N YT+ ++ + + Y A V + G+ IG +A S WLY+VPWG+
Sbjct: 314 YIGINQYTASYMKGQQLMQQTPTSYSADWQVTAVFAKNGKPIGPQANSNWLYIVPWGMYG 373
Query: 373 VLNYIAKTYNNPPIYVTENGMDDEENDSSPLHEMLDDKLRVRYFKGYLSAVAQAIKDGAD 432
+NYI + Y NP + +T NGMD N S + L D RV +++ YL+ + +AI +GA+
Sbjct: 374 CVNYIKQKYGNPTVVITGNGMDQPANLSR--DQYLRDTTRVHFYRSYLTQLKKAIDEGAN 431
Query: 433 VRGYFVWSLLDNFEWAQGYTKRFGLVYVDYKNGLVRHPKSSAYWFMRFL 481
V GYF WSLLDNFEW GYT +FG+VYVD+ N L RHPK+SAYWF L
Sbjct: 432 VAGYFAWSLLDNFEWLSGYTSKFGIVYVDF-NTLERHPKASAYWFRDML 479
>pdb|3SCN|A Chain A, Crystal Structure Of Rice Bglu1 E386g Mutant
pdb|3SCN|B Chain B, Crystal Structure Of Rice Bglu1 E386g Mutant
pdb|3SCO|A Chain A, Crystal Structure Of Rice Bglu1 E386g Mutant Complexed
With Alpha- Glucosyl Fluoride
pdb|3SCO|B Chain B, Crystal Structure Of Rice Bglu1 E386g Mutant Complexed
With Alpha- Glucosyl Fluoride
pdb|3SCT|A Chain A, Crystal Structure Of Rice Bglu1 E386g Mutant Complexed
With Cellotetraose
pdb|3SCT|B Chain B, Crystal Structure Of Rice Bglu1 E386g Mutant Complexed
With Cellotetraose
pdb|3SCU|A Chain A, Crystal Structure Of Rice Bglu1 E386g Mutant Complexed
With Cellopentaose
pdb|3SCU|B Chain B, Crystal Structure Of Rice Bglu1 E386g Mutant Complexed
With Cellopentaose
Length = 481
Score = 486 bits (1251), Expect = e-137, Method: Compositional matrix adjust.
Identities = 236/469 (50%), Positives = 311/469 (66%), Gaps = 10/469 (2%)
Query: 19 VSKTDFPPNFVFGVATSAYQIEGACEEGNRGASIWDDFTHTEGKIIDKSNGDVAVDHYHR 78
+S+ FP FVFG TSAYQ+EG G RG SIWD F HT G + NGDVA D YHR
Sbjct: 15 LSRAAFPKRFVFGTVTSAYQVEGMAASGGRGPSIWDAFAHTPGNVAGNQNGDVATDQYHR 74
Query: 79 YKEDIDLIAKLGFDAYRFSISWSRIFPDGLGTKINMEGITFYNNIIDALLQKGIQPYVTL 138
YKED++L+ L FDAYRFSISWSRIFPDG G ++N EG+ +YNN+I+ LLQKGI PYV L
Sbjct: 75 YKEDVNLMKSLNFDAYRFSISWSRIFPDGEG-RVNQEGVAYYNNLINYLLQKGITPYVNL 133
Query: 139 YHWDLPLHLHESMGGWLNKEIVKYFEIYADTCFASFGDRVKNWITINEPLQTAVNGYCTG 198
YH+DLPL L + GGWLN ++ F YAD CF +FG+RVK+W T NEP A+ GY G
Sbjct: 134 YHYDLPLALEKKYGGWLNAKMADLFTEYADFCFKTFGNRVKHWFTFNEPRIVALLGYDQG 193
Query: 199 IFAPGRHQ------HSSTEPYLVAHHQILAHAAAFSVYQRKYKDKQGGNIGLVVDCEWAE 252
P R +S+TEPY+VAH+ +L+HAAA + Y+ KY+ Q G +G+V+D W E
Sbjct: 194 TNPPKRCTKCAAGGNSATEPYIVAHNFLLSHAAAVARYRTKYQAAQQGKVGIVLDFNWYE 253
Query: 253 ANSDKIEDKSAAARRLDFQIGWYLHPIYYGDYPEVMRNNLGDQLPKFMQKDKELVRNSLD 312
A S+ ED++AA R DF IGWYL P+ G YP++M++ + D+LPKF + LV+ S D
Sbjct: 254 ALSNSTEDQAAAQRARDFHIGWYLDPLINGHYPQIMQDLVKDRLPKFTPEQARLVKGSAD 313
Query: 313 FVGLNHYTSRFIAHATKSPEEGSFYEAQEMERLVEWEGGEVIGEKAASEWLYVVPWGLRK 372
++G+N YT+ ++ + + Y A V + G+ IG +A S WLY+VPWG+
Sbjct: 314 YIGINQYTASYMKGQQLMQQTPTSYSADWQVTYVFAKNGKPIGPQANSNWLYIVPWGMYG 373
Query: 373 VLNYIAKTYNNPPIYVTENGMDDEENDSSPLHEMLDDKLRVRYFKGYLSAVAQAIKDGAD 432
+NYI + Y NP + +T NGMD N S + L D RV +++ YL+ + +AI +GA+
Sbjct: 374 CVNYIKQKYGNPTVVITGNGMDQPANLSR--DQYLRDTTRVHFYRSYLTQLKKAIDEGAN 431
Query: 433 VRGYFVWSLLDNFEWAQGYTKRFGLVYVDYKNGLVRHPKSSAYWFMRFL 481
V GYF WSLLDNFEW GYT +FG+VYVD+ N L RHPK+SAYWF L
Sbjct: 432 VAGYFAWSLLDNFEWLSGYTSKFGIVYVDF-NTLERHPKASAYWFRDML 479
>pdb|3SCV|A Chain A, Crystal Structure Of Rice Bglu1 E386gS334A MUTANT
COMPLEXED WITH Cellotetraose
pdb|3SCV|B Chain B, Crystal Structure Of Rice Bglu1 E386gS334A MUTANT
COMPLEXED WITH Cellotetraose
Length = 481
Score = 486 bits (1250), Expect = e-137, Method: Compositional matrix adjust.
Identities = 236/469 (50%), Positives = 311/469 (66%), Gaps = 10/469 (2%)
Query: 19 VSKTDFPPNFVFGVATSAYQIEGACEEGNRGASIWDDFTHTEGKIIDKSNGDVAVDHYHR 78
+S+ FP FVFG TSAYQ+EG G RG SIWD F HT G + NGDVA D YHR
Sbjct: 15 LSRAAFPKRFVFGTVTSAYQVEGMAASGGRGPSIWDAFAHTPGNVAGNQNGDVATDQYHR 74
Query: 79 YKEDIDLIAKLGFDAYRFSISWSRIFPDGLGTKINMEGITFYNNIIDALLQKGIQPYVTL 138
YKED++L+ L FDAYRFSISWSRIFPDG G ++N EG+ +YNN+I+ LLQKGI PYV L
Sbjct: 75 YKEDVNLMKSLNFDAYRFSISWSRIFPDGEG-RVNQEGVAYYNNLINYLLQKGITPYVNL 133
Query: 139 YHWDLPLHLHESMGGWLNKEIVKYFEIYADTCFASFGDRVKNWITINEPLQTAVNGYCTG 198
YH+DLPL L + GGWLN ++ F YAD CF +FG+RVK+W T NEP A+ GY G
Sbjct: 134 YHYDLPLALEKKYGGWLNAKMADLFTEYADFCFKTFGNRVKHWFTFNEPRIVALLGYDQG 193
Query: 199 IFAPGRHQ------HSSTEPYLVAHHQILAHAAAFSVYQRKYKDKQGGNIGLVVDCEWAE 252
P R +S+TEPY+VAH+ +L+HAAA + Y+ KY+ Q G +G+V+D W E
Sbjct: 194 TNPPKRCTKCAAGGNSATEPYIVAHNFLLSHAAAVARYRTKYQAAQQGKVGIVLDFNWYE 253
Query: 253 ANSDKIEDKSAAARRLDFQIGWYLHPIYYGDYPEVMRNNLGDQLPKFMQKDKELVRNSLD 312
A S+ ED++AA R DF IGWYL P+ G YP++M++ + D+LPKF + LV+ S D
Sbjct: 254 ALSNSTEDQAAAQRARDFHIGWYLDPLINGHYPQIMQDLVKDRLPKFTPEQARLVKGSAD 313
Query: 313 FVGLNHYTSRFIAHATKSPEEGSFYEAQEMERLVEWEGGEVIGEKAASEWLYVVPWGLRK 372
++G+N YT+ ++ + + Y A V + G+ IG +A S WLY+VPWG+
Sbjct: 314 YIGINQYTASYMKGQQLMQQTPTSYAADWQVTYVFAKNGKPIGPQANSNWLYIVPWGMYG 373
Query: 373 VLNYIAKTYNNPPIYVTENGMDDEENDSSPLHEMLDDKLRVRYFKGYLSAVAQAIKDGAD 432
+NYI + Y NP + +T NGMD N S + L D RV +++ YL+ + +AI +GA+
Sbjct: 374 CVNYIKQKYGNPTVVITGNGMDQPANLSR--DQYLRDTTRVHFYRSYLTQLKKAIDEGAN 431
Query: 433 VRGYFVWSLLDNFEWAQGYTKRFGLVYVDYKNGLVRHPKSSAYWFMRFL 481
V GYF WSLLDNFEW GYT +FG+VYVD+ N L RHPK+SAYWF L
Sbjct: 432 VAGYFAWSLLDNFEWLSGYTSKFGIVYVDF-NTLERHPKASAYWFRDML 479
>pdb|3PTK|A Chain A, The Crystal Structure Of Rice (Oryza Sativa L.) Os4bglu12
pdb|3PTK|B Chain B, The Crystal Structure Of Rice (Oryza Sativa L.) Os4bglu12
pdb|3PTM|A Chain A, The Crystal Structure Of Rice (Oryza Sativa L.) Os4bglu12
With 2- Fluoroglucopyranoside
pdb|3PTM|B Chain B, The Crystal Structure Of Rice (Oryza Sativa L.) Os4bglu12
With 2- Fluoroglucopyranoside
pdb|3PTQ|A Chain A, The Crystal Structure Of Rice (Oryza Sativa L.) Os4bglu12
With Dinitrophenyl
2-Deoxy-2-Fluoro-Beta-D-Glucopyranoside
pdb|3PTQ|B Chain B, The Crystal Structure Of Rice (Oryza Sativa L.) Os4bglu12
With Dinitrophenyl
2-Deoxy-2-Fluoro-Beta-D-Glucopyranoside
Length = 505
Score = 457 bits (1177), Expect = e-129, Method: Compositional matrix adjust.
Identities = 230/483 (47%), Positives = 306/483 (63%), Gaps = 12/483 (2%)
Query: 11 YEQAEPRNVSKTDFPPNFVFGVATSAYQIEGACEEGNRGASIWDDFTHTEG-KIIDKSNG 69
Y A VS+ FP F+FG A+S+YQ EG EG RG SIWD FTH KI D+SNG
Sbjct: 21 YNSAGEPPVSRRSFPKGFIFGTASSSYQYEGGAAEGGRGPSIWDTFTHQHPEKIADRSNG 80
Query: 70 DVAVDHYHRYKEDIDLIAKLGFDAYRFSISWSRIFPDG-LGTKINMEGITFYNNIIDALL 128
DVA D YH YKED+ L+ +G DAYRFSISW+RI P+G L +N EGI +YNN+I+ LL
Sbjct: 81 DVASDSYHLYKEDVRLMKDMGMDAYRFSISWTRILPNGSLRGGVNKEGIKYYNNLINELL 140
Query: 129 QKGIQPYVTLYHWDLPLHLHESMGGWLNKEIVKYFEIYADTCFASFGDRVKNWITINEPL 188
KG+QP++TL+HWD P L + G+L+ I+ F+ YA+ CF FGDRVKNWIT NEP
Sbjct: 141 SKGVQPFITLFHWDSPQALEDKYNGFLSPNIINDFKDYAEICFKEFGDRVKNWITFNEPW 200
Query: 189 QTAVNGYCTGIFAPGRHQ----------HSSTEPYLVAHHQILAHAAAFSVYQRKYKDKQ 238
NGY TG+FAPGR S EPY HHQ+LAHA +Y+ KY+ Q
Sbjct: 201 TFCSNGYATGLFAPGRCSPWEKGNCSVGDSGREPYTACHHQLLAHAETVRLYKAKYQALQ 260
Query: 239 GGNIGLVVDCEWAEANSDKIEDKSAAARRLDFQIGWYLHPIYYGDYPEVMRNNLGDQLPK 298
G IG+ + W S + AA R +DF GW++ P+ GDYP MR +G++LP+
Sbjct: 261 KGKIGITLVSHWFVPFSRSKSNNDAAKRAIDFMFGWFMDPLIRGDYPLSMRGLVGNRLPQ 320
Query: 299 FMQKDKELVRNSLDFVGLNHYTSRFIAHATKSPEEGSFYEAQEMERLVEWEGGEVIGEKA 358
F ++ +LV+ + DF+GLN+YT+ + + S + Y L G IG +A
Sbjct: 321 FTKEQSKLVKGAFDFIGLNYYTANYADNLPPSNGLNNSYTTDSRANLTGVRNGIPIGPQA 380
Query: 359 ASEWLYVVPWGLRKVLNYIAKTYNNPPIYVTENGMDDEENDSSPLHEMLDDKLRVRYFKG 418
AS WLYV P G R +L Y+ + Y NP +Y+TENG+D+ N + PL E L D R+ Y+
Sbjct: 381 ASPWLYVYPQGFRDLLLYVKENYGNPTVYITENGVDEFNNKTLPLQEALKDDARIEYYHK 440
Query: 419 YLSAVAQAIKDGADVRGYFVWSLLDNFEWAQGYTKRFGLVYVDYKNGLVRHPKSSAYWFM 478
+L ++ AI+DGA+V+GYF WSLLDNFEW+ GYT RFG+ +VDY +G R+PK+SA+WF
Sbjct: 441 HLLSLLSAIRDGANVKGYFAWSLLDNFEWSNGYTVRFGINFVDYNDGRKRYPKNSAHWFK 500
Query: 479 RFL 481
+FL
Sbjct: 501 KFL 503
>pdb|4A3Y|A Chain A, Crystal Structure Of Raucaffricine Glucosidase From
Ajmaline Biosynthesis Pathway
pdb|4A3Y|B Chain B, Crystal Structure Of Raucaffricine Glucosidase From
Ajmaline Biosynthesis Pathway
Length = 540
Score = 439 bits (1130), Expect = e-123, Method: Compositional matrix adjust.
Identities = 227/492 (46%), Positives = 315/492 (64%), Gaps = 32/492 (6%)
Query: 19 VSKTDFPPNFVFGVATSAYQIEGACEEGNRGASIWDDFTHTEGKII-DKSNGDVAVDHYH 77
+S++DFP +F+ G +SAYQIEG +G RG SIWD FTH +I +NGDVAVD YH
Sbjct: 17 ISRSDFPADFIMGTGSSAYQIEGGARDGGRGPSIWDTFTHRRPDMIRGGTNGDVAVDSYH 76
Query: 78 RYKEDIDLIAKLGFDAYRFSISWSRIFPDG-LGTKINMEGITFYNNIIDALLQKGIQPYV 136
YKED++++ LG DAYRFSISWSR+ P G L +N EGI +YNN+ID LL GI+P+V
Sbjct: 77 LYKEDVNILKNLGLDAYRFSISWSRVLPGGRLSGGVNKEGINYYNNLIDGLLANGIKPFV 136
Query: 137 TLYHWDLPLHLHESMGGWLNKEIVKYFEIYADTCFASFGDRVKNWITINEPLQTAVNGYC 196
TL+HWD+P L + GG+L+ IV F YA+ CF FGDRVK+W+T+NEP +V+GY
Sbjct: 137 TLFHWDVPQALEDEYGGFLSPRIVDDFCEYAELCFWEFGDRVKHWMTLNEPWTFSVHGYA 196
Query: 197 TGIFAPGRHQHS---------------------------STEPYLVAHHQILAHAAAFSV 229
TG++APGR + S TEPY V HH +LAHAAA +
Sbjct: 197 TGLYAPGRGRTSPEHVNHPTVQHRCSTVAPQCICSTGNPGTEPYWVTHHLLLAHAAAVEL 256
Query: 230 YQRKYKDKQGGNIGLVVDCEWAEA-NSDKIEDKSAAARRLDFQIGWYLHPIYYGDYPEVM 288
Y+ K++ Q G IG+ +W E + + D AAAR LDF +GW++ PI GDYP+ M
Sbjct: 257 YKNKFQRGQEGQIGISHATQWMEPWDENSASDVEAAARALDFMLGWFMEPITSGDYPKSM 316
Query: 289 RNNLGDQLPKFMQKDKELVRNSLDFVGLNHYTSRFIAHA-TKSPEEGSFYEAQEMERLVE 347
+ +G +LPKF + ++++ S DFVGLN+YT+ ++ +A T S +F ++ E
Sbjct: 317 KKFVGSRLPKFSPEQSKMLKGSYDFVGLNYYTASYVTNASTNSSGSNNFSYNTDIHVTYE 376
Query: 348 WE-GGEVIGEKAASEWLYVVPWGLRKVLNYIAKTYNNPPIYVTENGMDDEENDSSPLHEM 406
+ G IG ++ S+WL + P G+RK+L Y KTYN P IYVTENG+DD +N + L E
Sbjct: 377 TDRNGVPIGPQSGSDWLLIYPEGIRKILVYTKKTYNVPLIYVTENGVDDVKNTNLTLSEA 436
Query: 407 LDDKLRVRYFKGYLSAVAQAIKDGADVRGYFVWSLLDNFEWAQGYTKRFGLVYVDYKNGL 466
D +R++Y + ++ V QA+ DG +V+GYF WSLLDNFEW +GY RFG++++DY +
Sbjct: 437 RKDSMRLKYLQDHIFNVRQAMNDGVNVKGYFAWSLLDNFEWGEGYGVRFGIIHIDYNDNF 496
Query: 467 VRHPKSSAYWFM 478
R+PK SA W M
Sbjct: 497 ARYPKDSAVWLM 508
>pdb|1CBG|A Chain A, The Crystal Structure Of A Cyanogenic Beta-Glucosidase
From White Clover (Trifolium Repens L.), A Family 1
Glycosyl-Hydrolase
Length = 490
Score = 439 bits (1128), Expect = e-123, Method: Compositional matrix adjust.
Identities = 227/476 (47%), Positives = 302/476 (63%), Gaps = 12/476 (2%)
Query: 18 NVSKTDFPPNFVFGVATSAYQIEGACEEGNRGASIWDDFTHT-EGKIIDKSNGDVAVDHY 76
+++++ F P FVFG A+SA+Q EGA E +G SIWD FTH KI D++NGDVA+D Y
Sbjct: 13 DLNRSCFAPGFVFGTASSAFQYEGAAFEDGKGPSIWDTFTHKYPEKIKDRTNGDVAIDEY 72
Query: 77 HRYKEDIDLIAKLGFDAYRFSISWSRIFPDG-LGTKINMEGITFYNNIIDALLQKGIQPY 135
HRYKEDI ++ + DAYRFSISW R+ P G L +N EGI +YNN+I+ +L G+QPY
Sbjct: 73 HRYKEDIGIMKDMNLDAYRFSISWPRVLPKGKLSGGVNREGINYYNNLINEVLANGMQPY 132
Query: 136 VTLYHWDLPLHLHESMGGWLNKEIVKYFEIYADTCFASFGDRVKNWITINEPLQTAVNGY 195
VTL+HWD+P L + G+L + IV F YA+ CF FGDRVK+WIT+NEP ++N Y
Sbjct: 133 VTLFHWDVPQALEDEYRGFLGRNIVDDFRDYAELCFKEFGDRVKHWITLNEPWGVSMNAY 192
Query: 196 CTGIFAPGRHQH----------SSTEPYLVAHHQILAHAAAFSVYQRKYKDKQGGNIGLV 245
G FAPGR S EPYL AH+Q+LAHAAA +Y+ KY+ Q G IG+
Sbjct: 193 AYGTFAPGRCSDWLKLNCTGGDSGREPYLAAHYQLLAHAAAARLYKTKYQASQNGIIGIT 252
Query: 246 VDCEWAEANSDKIEDKSAAARRLDFQIGWYLHPIYYGDYPEVMRNNLGDQLPKFMQKDKE 305
+ W E S + D AA R LDF +GW++HP+ G YPE MR + +LPKF ++ +
Sbjct: 253 LVSHWFEPASKEKADVDAAKRGLDFMLGWFMHPLTKGRYPESMRYLVRKRLPKFSTEESK 312
Query: 306 LVRNSLDFVGLNHYTSRFIAHATKSPEEGSFYEAQEMERLVEWEGGEVIGEKAASEWLYV 365
+ S DF+GLN+Y+S + A A + P + + G+ +G AAS WL +
Sbjct: 313 ELTGSFDFLGLNYYSSYYAAKAPRIPNARPAIQTDSLINATFEHNGKPLGPMAASSWLCI 372
Query: 366 VPWGLRKVLNYIAKTYNNPPIYVTENGMDDEENDSSPLHEMLDDKLRVRYFKGYLSAVAQ 425
P G+RK+L Y+ YNNP IY+TENG ++ + + L E L D R+ Y+ +L V
Sbjct: 373 YPQGIRKLLLYVKNHYNNPVIYITENGRNEFNDPTLSLQESLLDTPRIDYYYRHLYYVLT 432
Query: 426 AIKDGADVRGYFVWSLLDNFEWAQGYTKRFGLVYVDYKNGLVRHPKSSAYWFMRFL 481
AI DG +V+GYF WSL DN EW GYT RFGLV+VD+KN L RHPK SA+WF FL
Sbjct: 433 AIGDGVNVKGYFAWSLFDNMEWDSGYTVRFGLVFVDFKNNLKRHPKLSAHWFKSFL 488
>pdb|4ATD|A Chain A, Crystal Structure Of Native Raucaffricine Glucosidase
pdb|4ATD|B Chain B, Crystal Structure Of Native Raucaffricine Glucosidase
pdb|4ATL|A Chain A, Crystal Structure Of Raucaffricine Glucosidase In Complex
With Glucose
pdb|4ATL|B Chain B, Crystal Structure Of Raucaffricine Glucosidase In Complex
With Glucose
Length = 513
Score = 439 bits (1128), Expect = e-123, Method: Compositional matrix adjust.
Identities = 227/492 (46%), Positives = 315/492 (64%), Gaps = 32/492 (6%)
Query: 19 VSKTDFPPNFVFGVATSAYQIEGACEEGNRGASIWDDFTHTEGKII-DKSNGDVAVDHYH 77
+S++DFP +F+ G +SAYQIEG +G RG SIWD FTH +I +NGDVAVD YH
Sbjct: 17 ISRSDFPADFIMGTGSSAYQIEGGARDGGRGPSIWDTFTHRRPDMIRGGTNGDVAVDSYH 76
Query: 78 RYKEDIDLIAKLGFDAYRFSISWSRIFPDG-LGTKINMEGITFYNNIIDALLQKGIQPYV 136
YKED++++ LG DAYRFSISWSR+ P G L +N EGI +YNN+ID LL GI+P+V
Sbjct: 77 LYKEDVNILKNLGLDAYRFSISWSRVLPGGRLSGGVNKEGINYYNNLIDGLLANGIKPFV 136
Query: 137 TLYHWDLPLHLHESMGGWLNKEIVKYFEIYADTCFASFGDRVKNWITINEPLQTAVNGYC 196
TL+HWD+P L + GG+L+ IV F YA+ CF FGDRVK+W+T+NEP +V+GY
Sbjct: 137 TLFHWDVPQALEDEYGGFLSPRIVDDFCEYAELCFWEFGDRVKHWMTLNEPWTFSVHGYA 196
Query: 197 TGIFAPGRHQHS---------------------------STEPYLVAHHQILAHAAAFSV 229
TG++APGR + S TEPY V HH +LAHAAA +
Sbjct: 197 TGLYAPGRGRTSPEHVNHPTVQHRCSTVAPQCICSTGNPGTEPYWVTHHLLLAHAAAVEL 256
Query: 230 YQRKYKDKQGGNIGLVVDCEWAEA-NSDKIEDKSAAARRLDFQIGWYLHPIYYGDYPEVM 288
Y+ K++ Q G IG+ +W E + + D AAAR LDF +GW++ PI GDYP+ M
Sbjct: 257 YKNKFQRGQEGQIGISHATQWMEPWDENSASDVEAAARALDFMLGWFMEPITSGDYPKSM 316
Query: 289 RNNLGDQLPKFMQKDKELVRNSLDFVGLNHYTSRFIAHA-TKSPEEGSFYEAQEMERLVE 347
+ +G +LPKF + ++++ S DFVGLN+YT+ ++ +A T S +F ++ E
Sbjct: 317 KKFVGSRLPKFSPEQSKMLKGSYDFVGLNYYTASYVTNASTNSSGSNNFSYNTDIHVTYE 376
Query: 348 WE-GGEVIGEKAASEWLYVVPWGLRKVLNYIAKTYNNPPIYVTENGMDDEENDSSPLHEM 406
+ G IG ++ S+WL + P G+RK+L Y KTYN P IYVTENG+DD +N + L E
Sbjct: 377 TDRNGVPIGPQSGSDWLLIYPEGIRKILVYTKKTYNVPLIYVTENGVDDVKNTNLTLSEA 436
Query: 407 LDDKLRVRYFKGYLSAVAQAIKDGADVRGYFVWSLLDNFEWAQGYTKRFGLVYVDYKNGL 466
D +R++Y + ++ V QA+ DG +V+GYF WSLLDNFEW +GY RFG++++DY +
Sbjct: 437 RKDSMRLKYLQDHIFNVRQAMNDGVNVKGYFAWSLLDNFEWGEGYGVRFGIIHIDYNDNF 496
Query: 467 VRHPKSSAYWFM 478
R+PK SA W M
Sbjct: 497 ARYPKDSAVWLM 508
>pdb|3U57|A Chain A, Structures Of Alkaloid Biosynthetic Glucosidases Decode
Substrate Specificity
pdb|3U57|B Chain B, Structures Of Alkaloid Biosynthetic Glucosidases Decode
Substrate Specificity
pdb|3U5U|A Chain A, Structures Of Alkaloid Biosynthetic Glucosidases Decode
Substrate Specificity
pdb|3U5U|B Chain B, Structures Of Alkaloid Biosynthetic Glucosidases Decode
Substrate Specificity
pdb|3U5Y|A Chain A, Structures Of Alkaloid Biosynthetic Glucosidases Decode
Substrate Specificity
pdb|3U5Y|B Chain B, Structures Of Alkaloid Biosynthetic Glucosidases Decode
Substrate Specificity
pdb|4EK7|A Chain A, High Speed X-ray Analysis Of Plant Enzymes At Room
Temperature
pdb|4EK7|B Chain B, High Speed X-ray Analysis Of Plant Enzymes At Room
Temperature
Length = 513
Score = 437 bits (1125), Expect = e-123, Method: Compositional matrix adjust.
Identities = 226/492 (45%), Positives = 315/492 (64%), Gaps = 32/492 (6%)
Query: 19 VSKTDFPPNFVFGVATSAYQIEGACEEGNRGASIWDDFTHTEGKII-DKSNGDVAVDHYH 77
+S++DFP +F+ G +SAYQIEG +G RG SIWD FTH +I +NGDVAVD YH
Sbjct: 17 ISRSDFPADFIMGTGSSAYQIEGGARDGGRGPSIWDTFTHRRPDMIRGGTNGDVAVDSYH 76
Query: 78 RYKEDIDLIAKLGFDAYRFSISWSRIFPDG-LGTKINMEGITFYNNIIDALLQKGIQPYV 136
YKED++++ LG DAYRFSISWSR+ P G L +N EGI +YNN+ID LL GI+P+V
Sbjct: 77 LYKEDVNILKNLGLDAYRFSISWSRVLPGGRLSGGVNKEGINYYNNLIDGLLANGIKPFV 136
Query: 137 TLYHWDLPLHLHESMGGWLNKEIVKYFEIYADTCFASFGDRVKNWITINEPLQTAVNGYC 196
TL+HWD+P L + GG+L+ IV F YA+ CF FGDRVK+W+T+N+P +V+GY
Sbjct: 137 TLFHWDVPQALEDEYGGFLSPRIVDDFCEYAELCFWEFGDRVKHWMTLNQPWTFSVHGYA 196
Query: 197 TGIFAPGRHQHS---------------------------STEPYLVAHHQILAHAAAFSV 229
TG++APGR + S TEPY V HH +LAHAAA +
Sbjct: 197 TGLYAPGRGRTSPEHVNHPTVQHRCSTVAPQCICSTGNPGTEPYWVTHHLLLAHAAAVEL 256
Query: 230 YQRKYKDKQGGNIGLVVDCEWAEA-NSDKIEDKSAAARRLDFQIGWYLHPIYYGDYPEVM 288
Y+ K++ Q G IG+ +W E + + D AAAR LDF +GW++ PI GDYP+ M
Sbjct: 257 YKNKFQRGQEGQIGISHATQWMEPWDENSASDVEAAARALDFMLGWFMEPITSGDYPKSM 316
Query: 289 RNNLGDQLPKFMQKDKELVRNSLDFVGLNHYTSRFIAHA-TKSPEEGSFYEAQEMERLVE 347
+ +G +LPKF + ++++ S DFVGLN+YT+ ++ +A T S +F ++ E
Sbjct: 317 KKFVGSRLPKFSPEQSKMLKGSYDFVGLNYYTASYVTNASTNSSGSNNFSYNTDIHVTYE 376
Query: 348 WE-GGEVIGEKAASEWLYVVPWGLRKVLNYIAKTYNNPPIYVTENGMDDEENDSSPLHEM 406
+ G IG ++ S+WL + P G+RK+L Y KTYN P IYVTENG+DD +N + L E
Sbjct: 377 TDRNGVPIGPQSGSDWLLIYPEGIRKILVYTKKTYNVPLIYVTENGVDDVKNTNLTLSEA 436
Query: 407 LDDKLRVRYFKGYLSAVAQAIKDGADVRGYFVWSLLDNFEWAQGYTKRFGLVYVDYKNGL 466
D +R++Y + ++ V QA+ DG +V+GYF WSLLDNFEW +GY RFG++++DY +
Sbjct: 437 RKDSMRLKYLQDHIFNVRQAMNDGVNVKGYFAWSLLDNFEWGEGYGVRFGIIHIDYNDNF 496
Query: 467 VRHPKSSAYWFM 478
R+PK SA W M
Sbjct: 497 ARYPKDSAVWLM 508
>pdb|2JF6|A Chain A, Structure Of Inactive Mutant Of Strictosidine Glucosidase
In Complex With Strictosidine
pdb|2JF6|B Chain B, Structure Of Inactive Mutant Of Strictosidine Glucosidase
In Complex With Strictosidine
pdb|2JF7|A Chain A, Structure Of Strictosidine Glucosidase
pdb|2JF7|B Chain B, Structure Of Strictosidine Glucosidase
Length = 532
Score = 426 bits (1094), Expect = e-119, Method: Compositional matrix adjust.
Identities = 217/470 (46%), Positives = 291/470 (61%), Gaps = 8/470 (1%)
Query: 19 VSKTDFPPNFVFGVATSAYQIEGACEEGNRGASIWDDFTH-TEGKIIDKSNGDVAVDHYH 77
V + DFP +F+FG SAYQ EGA EGNRG SIWD FT + KI D SNG+ A++ YH
Sbjct: 38 VHRRDFPQDFIFGAGGSAYQCEGAYNEGNRGPSIWDTFTQRSPAKISDGSNGNQAINCYH 97
Query: 78 RYKEDIDLIAKLGFDAYRFSISWSRIFPDG-LGTKINMEGITFYNNIIDALLQKGIQPYV 136
YKEDI ++ + G ++YRFSISWSR+ P G L +N +G+ FY++ ID LL GI+P V
Sbjct: 98 MYKEDIKIMKQTGLESYRFSISWSRVLPGGRLAAGVNKDGVKFYHDFIDELLANGIKPSV 157
Query: 137 TLYHWDLPLHLHESMGGWLNKEIVKYFEIYADTCFASFGDRVKNWITINEPLQTAVNGYC 196
TL+HWDLP L + GG+L+ IV F YA+ CF FGD++K W T NEP AVNGY
Sbjct: 158 TLFHWDLPQALEDEYGGFLSHRIVDDFCEYAEFCFWEFGDKIKYWTTFNEPHTFAVNGYA 217
Query: 197 TGIFAPGR-----HQHSSTEPYLVAHHQILAHAAAFSVYQRKYKDKQGGNIGLVVDCEWA 251
G FAPGR + EPY+V H+ +LAH AA Y+ K++ Q G IG+V++ W
Sbjct: 218 LGEFAPGRGGKGDEGDPAIEPYVVTHNILLAHKAAVEEYRNKFQKCQEGEIGIVLNSMWM 277
Query: 252 EANSDKIEDKSAAARRLDFQIGWYLHPIYYGDYPEVMRNNLGDQLPKFMQKDKELVRNSL 311
E SD D A R LDF +GW+L P+ GDYP+ MR + +LPKF D E ++
Sbjct: 278 EPLSDVQADIDAQKRALDFMLGWFLEPLTTGDYPKSMRELVKGRLPKFSADDSEKLKGCY 337
Query: 312 DFVGLNHYTSRFIAHATKSPEEGSFYEAQEMERLVEWEGGEVIGEKAASEWLYVVPWGLR 371
DF+G+N+YT+ ++ +A KS E YE + + IG W +VVPWGL
Sbjct: 338 DFIGMNYYTATYVTNAVKSNSEKLSYETDDQVTKTFERNQKPIGHALYGGWQHVVPWGLY 397
Query: 372 KVLNYIAKTYNNPPIYVTENGMDDEENDSSPLHEMLDDKLRVRYFKGYLSAVAQAIKDGA 431
K+L Y +TY+ P +YVTE+GM +E L E D R Y + +L++V AI DG
Sbjct: 398 KLLVYTKETYHVPVLYVTESGMVEENKTKILLSEARRDAERTDYHQKHLASVRDAIDDGV 457
Query: 432 DVRGYFVWSLLDNFEWAQGYTKRFGLVYVDYKNGLVRHPKSSAYWFMRFL 481
+V+GYFVWS DNFEW GY R+G+++VDYK+ R+PK SA W+ F+
Sbjct: 458 NVKGYFVWSFFDNFEWNLGYICRYGIIHVDYKS-FERYPKESAIWYKNFI 506
>pdb|4GXP|A Chain A, Chimeric Family 1 Beta-Glucosidase Made With
Non-Contiguous Schema
pdb|4GXP|B Chain B, Chimeric Family 1 Beta-Glucosidase Made With
Non-Contiguous Schema
pdb|4GXP|C Chain C, Chimeric Family 1 Beta-Glucosidase Made With
Non-Contiguous Schema
Length = 467
Score = 417 bits (1073), Expect = e-117, Method: Compositional matrix adjust.
Identities = 224/464 (48%), Positives = 299/464 (64%), Gaps = 20/464 (4%)
Query: 18 NVSKTDFPPNFVFGVATSAYQIEGACEEGNRGASIWDDFTHTEGKIIDKSNGDVAVDHYH 77
NV K FP F++GVAT++YQIEG+ G SIW F+HT G + + GDVA DHY+
Sbjct: 9 NVKK--FPEGFLWGVATASYQIEGSPLADGAGMSIWHTFSHTPGNVKNGDTGDVACDHYN 66
Query: 78 RYKEDIDLIAKLGFDAYRFSISWSRIFPDGLGTKINMEGITFYNNIIDALLQKGIQPYVT 137
R+KEDI++I KLG AYRFSISW RI P+G G ++N +G+ FYN IID LL+KGI P+VT
Sbjct: 67 RWKEDIEIIEKLGVKAYRFSISWPRILPEGTG-RVNQKGLDFYNRIIDTLLEKGITPFVT 125
Query: 138 LYHWDLPLHLHESMGGWLNKEIVKYFEIYADTCFASFGDRVKNWITINEPLQTAVNGYCT 197
++HWDLP L + GG LN+EI +F Y+ F +FGDRVKNWIT NEPL +A+ GY +
Sbjct: 126 IFHWDLPFAL-QLKGGLLNREIADWFAEYSRVLFENFGDRVKNWITFNEPLCSAIPGYGS 184
Query: 198 GIFAPGRHQHSSTEPYLVAHHQILAHAAAFSVYQRKYKDKQGGNIGLVVDCEWAEA-NSD 256
G FAPGR S++EP+ V H+ ++AH A V++ KD G IG+V++ ++ ++
Sbjct: 185 GTFAPGR--QSTSEPWTVGHNILVAHGRAVKVFRETVKD---GKIGIVLNGDFTYPWDAA 239
Query: 257 KIEDKSAAARRLDFQIGWYLHPIYYGDYPEVMRNNLGDQLPKFMQKDKELVRNSLDFVGL 316
DK AA RRL+F W+ PIY GDYP MR LGD+LP F +++ LV S DF G+
Sbjct: 240 DPADKEAAERRLEFFTAWFADPIYLGDYPASMRKQLGDRLPTFTPEERALVHGSNDFYGM 299
Query: 317 NHYTSRFIAHATKSPEEGSFYEAQEMERLVEWEGGEVIGEKAASEWLYVVPWGLRKVLNY 376
NHYTS +I H +S + ++ L + G IG + A WL G R L +
Sbjct: 300 NHYTSNYIRH--RSSPASADDTVGNVDVLFTNKQGNCIGPETAMPWLRPCAAGFRDFLVW 357
Query: 377 IAKTYNNPPIYVTENG--MDDEENDSSPLHEMLDDKLRVRYFKGYLSAVAQAIK-DGADV 433
I+K Y PPIYVTENG DD ++ +H D+ R+ Y K Y+ A+ A++ DG +V
Sbjct: 358 ISKRYGYPPIYVTENGAAFDDVVSEDGRVH----DQNRIDYLKAYIGAMVTAVELDGVNV 413
Query: 434 RGYFVWSLLDNFEWAQGYTKRFGLVYVDYKNGLVRHPKSSAYWF 477
+GYFVWSLLDNFEWA+GY+KRFG+VYVDY R K S YW+
Sbjct: 414 KGYFVWSLLDNFEWAEGYSKRFGIVYVDYST-QKRIVKDSGYWY 456
>pdb|2DGA|A Chain A, Crystal Structure Of Hexameric Beta-Glucosidase In Wheat
pdb|3AIQ|A Chain A, Crystal Structure Of Beta-Glucosidase In Wheat Complexed
With An Aglycone Dimboa
pdb|3AIR|A Chain A, Crystal Structure Of Beta-Glucosidase In Wheat Complexed
With 2-Deoxy- 2-Fluoroglucoside And Dinitrophenol
Length = 565
Score = 409 bits (1051), Expect = e-114, Method: Compositional matrix adjust.
Identities = 211/484 (43%), Positives = 290/484 (59%), Gaps = 16/484 (3%)
Query: 11 YEQAEPRNVSKTD-FPPNFVFGVATSAYQIEGACEEGNRGASIWDDFTHT-EGKIIDKSN 68
+ + +P + K D F +F+FG +TSAYQIEGA E +G S WD F HT +I D +N
Sbjct: 60 FTKLKPWQIPKRDWFDKDFLFGASTSAYQIEGAWNEDGKGPSTWDHFCHTYPERISDMTN 119
Query: 69 GDVAVDHYHRYKEDIDLIAKLGFDAYRFSISWSRIFPDGLGTKINMEGITFYNNIIDALL 128
GDVA + YH Y+ED+ + +G YRFSISWSRI PDG G K+N GI +YN +I++L+
Sbjct: 120 GDVAANSYHLYEEDVKALKDMGMKVYRFSISWSRILPDGTG-KVNQAGIDYYNKLINSLI 178
Query: 129 QKGIQPYVTLYHWDLPLHLHESMGGWLNKEIVKYFEIYADTCFASFGDRVKNWITINEPL 188
I PYVT++HWD P L + GG+LN++IV ++ +A+ CF +FGDRVKNW T NEP
Sbjct: 179 DNDIVPYVTIWHWDTPQALEDKYGGFLNRQIVDDYKQFAEVCFKNFGDRVKNWFTFNEPH 238
Query: 189 QTAVNGYCTGIFAPGRHQ----------HSSTEPYLVAHHQILAHAAAFSVYQRKYKDKQ 238
Y GI APGR S EPY HH +LAHA A +++ +Y
Sbjct: 239 TYCCFSYGEGIHAPGRCSPGMDCAVPEGDSLREPYTAGHHILLAHAEAVQLFKARYNMHG 298
Query: 239 GGNIGLVVDCEWAEANSDKIEDKSAAARRLDFQIGWYLHPIYYGDYPEVMRNNLGDQLPK 298
IG+ D E D D A R +D+ +GW+L P+ GDYP MR+ +GD+LP
Sbjct: 299 DSKIGMAFDVMGYEPYQDSFLDDQARERSIDYNMGWFLEPVVRGDYPFSMRSLIGDRLPM 358
Query: 299 FMQKDKELVRNSLDFVGLNHYTSRFIAHATKSPEEGSFYEAQEMERLVEWEG--GEVIGE 356
F ++++E + +S D +GLN+YTSRF H SP+ + E G G IG
Sbjct: 359 FTKEEQEKLASSCDIMGLNYYTSRFSKHVDMSPDFTPTLNTDDAYASSETTGSDGNDIGP 418
Query: 357 KAASEWLYVVPWGLRKVLNYIAKTYNNPPIYVTENGMDDEENDSSPLHEMLDDKLRVRYF 416
+ W+Y+ P GL +L + + Y NPP+++TENG+ D E D S + + LDD R+ Y
Sbjct: 419 ITGTYWIYMYPKGLTDLLLIMKEKYGNPPVFITENGIADVEGDES-MPDPLDDWKRLDYL 477
Query: 417 KGYLSAVAQAIKDGADVRGYFVWSLLDNFEWAQGYTKRFGLVYVDYKNGLVRHPKSSAYW 476
+ ++SAV AI GADVRG+F W L+DNFEW+ GY+ RFGLVY+D +G R K SA W
Sbjct: 478 QRHISAVKDAIDQGADVRGHFTWGLIDNFEWSLGYSSRFGLVYIDKNDGNKRKLKKSAKW 537
Query: 477 FMRF 480
F +F
Sbjct: 538 FSKF 541
>pdb|1V03|A Chain A, Crystal Structure Of The Sorghum Bicolor Dhurrinase 1
Length = 565
Score = 409 bits (1051), Expect = e-114, Method: Compositional matrix adjust.
Identities = 211/483 (43%), Positives = 288/483 (59%), Gaps = 16/483 (3%)
Query: 13 QAEPRNVSKTD-FPPNFVFGVATSAYQIEGACEEGNRGASIWDDFTHTEGK-IIDKSNGD 70
+ P + + D FPP+F+FG ATSAYQIEGA E +G S WD F H + I+D+SNGD
Sbjct: 64 RLSPWEIPRRDWFPPSFLFGAATSAYQIEGAWNEDGKGPSTWDHFCHNFPEWIVDRSNGD 123
Query: 71 VAVDHYHRYKEDIDLIAKLGFDAYRFSISWSRIFPDG-LGTKINMEGITFYNNIIDALLQ 129
VA D YH Y ED+ L+ ++G DAYRFSISW RI P G L IN +G+ +YN +ID LL+
Sbjct: 124 VAADSYHMYAEDVRLLKEMGMDAYRFSISWPRILPKGTLAGGINEKGVEYYNKLIDLLLE 183
Query: 130 KGIQPYVTLYHWDLPLHLHESMGGWLNKEIVKYFEIYADTCFASFGDRVKNWITINEPLQ 189
GI+PY+T++HWD P L E+ GG+L++ I+K + +A CF FG VKNW+T N+P
Sbjct: 184 NGIEPYITIFHWDTPQALVEAYGGFLDERIIKDYTDFAKVCFEKFGKTVKNWLTFNDPET 243
Query: 190 TAVNGYCTGIFAPGRHQ----------HSSTEPYLVAHHQILAHAAAFSVYQRKYKDKQG 239
Y TG+ APGR +S +EPY+VAH+ + AHA +Y KY
Sbjct: 244 FCSVSYGTGVLAPGRCSPGVSCAVPTGNSLSEPYIVAHNLLRAHAETVDIYN-KYHKGAD 302
Query: 240 GNIGLVVDCEWAEANSDKIEDKSAAARRLDFQIGWYLHPIYYGDYPEVMRNNLGDQLPKF 299
G IGL ++ ++ D+ A R +D +GW+L P+ GDYP MR + D++P F
Sbjct: 303 GRIGLALNVFGRVPYTNTFLDQQAQERSMDKCLGWFLEPVVRGDYPFSMRVSARDRVPYF 362
Query: 300 MQKDKELVRNSLDFVGLNHYTSRFIAHATKSPEEGSFYEAQEMERLVEWEG--GEVIGEK 357
+K++E + S D +G+N+YTS F H SP + E +G G IG
Sbjct: 363 KEKEQEKLVGSYDMIGINYYTSTFSKHIDLSPNNSPVLNTDDAYASQETKGPDGNAIGPP 422
Query: 358 AASEWLYVVPWGLRKVLNYIAKTYNNPPIYVTENGMDDEENDSSPLHEMLDDKLRVRYFK 417
+ W+ + P GL +L + Y NPP+Y+TENGM D + P L+D R+ Y +
Sbjct: 423 TGNAWINMYPKGLHDILMTMKNKYGNPPMYITENGMGDIDKGDLPKPVALEDHTRLDYIQ 482
Query: 418 GYLSAVAQAIKDGADVRGYFVWSLLDNFEWAQGYTKRFGLVYVDYKNGLVRHPKSSAYWF 477
+LS + Q+I GADVRGYF WSLLDNFEW+ GYT+RFG+VYVD +NG R K SA W
Sbjct: 483 RHLSVLKQSIDLGADVRGYFAWSLLDNFEWSSGYTERFGIVYVDRENGCERTMKRSARWL 542
Query: 478 MRF 480
F
Sbjct: 543 QEF 545
>pdb|3AIU|A Chain A, Crystal Structure Of Beta-Glucosidase In Rye
pdb|3AIV|A Chain A, Crystal Structure Of Beta-Glucosidase In Rye Complexed
With An Aglycone Dimboa
pdb|3AIW|A Chain A, Crystal Structure Of Beta-Glucosidase In Rye Complexed
With 2-Deoxy-2- Fluoroglucoside And Dinitrophenol
Length = 564
Score = 407 bits (1047), Expect = e-114, Method: Compositional matrix adjust.
Identities = 212/484 (43%), Positives = 290/484 (59%), Gaps = 16/484 (3%)
Query: 11 YEQAEPRNVSKTD-FPPNFVFGVATSAYQIEGACEEGNRGASIWDDFTHT-EGKIIDKSN 68
+ + +P + K D F +F+FG +TSAYQIEGA E +G S WD F HT +I D +N
Sbjct: 60 FTKLKPWQIPKRDWFSKDFLFGASTSAYQIEGAWNEDGKGPSTWDHFCHTYPERISDGTN 119
Query: 69 GDVAVDHYHRYKEDIDLIAKLGFDAYRFSISWSRIFPDGLGTKINMEGITFYNNIIDALL 128
GDVA + YH Y+ED+ + +G YRFSISWSRI P+G G K N +GI +YNN+I++L+
Sbjct: 120 GDVAANSYHMYEEDVKALKDMGMKVYRFSISWSRILPNGTG-KPNQKGIDYYNNLINSLI 178
Query: 129 QKGIQPYVTLYHWDLPLHLHESMGGWLNKEIVKYFEIYADTCFASFGDRVKNWITINEPL 188
+ GI PYVT++HWD P L + GG+L+K+IV ++ +A+ CF SFGDRVKNW T NEP
Sbjct: 179 RHGIVPYVTIWHWDTPQALEDKYGGFLDKQIVNDYKYFAELCFQSFGDRVKNWFTFNEPH 238
Query: 189 QTAVNGYCTGIFAPGR----------HQHSSTEPYLVAHHQILAHAAAFSVYQRKYKDKQ 238
Y GI APGR S EPY HH +LAHA A +++ Y
Sbjct: 239 TYCCFSYGEGIHAPGRCSPGLDCAVPEGDSLREPYTAGHHILLAHAEAVELFKAHYNKHG 298
Query: 239 GGNIGLVVDCEWAEANSDKIEDKSAAARRLDFQIGWYLHPIYYGDYPEVMRNNLGDQLPK 298
IG+ D E D D A R +D+ +GW+L P+ GDYP MR+ +GD+LP
Sbjct: 299 DSKIGMAFDVMGYEPYQDSFLDDQARERSIDYNMGWFLEPVVRGDYPFSMRSLIGDRLPM 358
Query: 299 FMQKDKELVRNSLDFVGLNHYTSRFIAHATKSPEEGSFYEAQEMERLVEWEG--GEVIGE 356
F ++++E + +S D +GLN+YTSRF H S + + E G G IG
Sbjct: 359 FTKEEQEKLASSCDIMGLNYYTSRFSKHVDISSDYTPTLNTDDAYASSETTGSDGNEIGP 418
Query: 357 KAASEWLYVVPWGLRKVLNYIAKTYNNPPIYVTENGMDDEENDSSPLHEMLDDKLRVRYF 416
+ W+Y+ P GL +L + + Y NPPI++TENG+ D E D + + LDD R+ Y
Sbjct: 419 ITGTYWIYMYPKGLTDLLLIMKEKYGNPPIFITENGIADVEGDPE-MPDPLDDWKRLDYL 477
Query: 417 KGYLSAVAQAIKDGADVRGYFVWSLLDNFEWAQGYTKRFGLVYVDYKNGLVRHPKSSAYW 476
+ ++SAV AI GADVRG+F W L+DNFEW GY+ RFGLVY+D ++G R K SA W
Sbjct: 478 QRHISAVKDAIDQGADVRGHFTWGLIDNFEWGSGYSSRFGLVYIDKEDGNKRKLKKSAKW 537
Query: 477 FMRF 480
F +F
Sbjct: 538 FAKF 541
>pdb|1V02|E Chain E, Crystal Structure Of The Sorghum Bicolor Dhurrinase 1
Length = 565
Score = 407 bits (1046), Expect = e-114, Method: Compositional matrix adjust.
Identities = 210/483 (43%), Positives = 288/483 (59%), Gaps = 16/483 (3%)
Query: 13 QAEPRNVSKTD-FPPNFVFGVATSAYQIEGACEEGNRGASIWDDFTHTEGK-IIDKSNGD 70
+ P + + D FPP+F+FG ATSAYQIEGA E +G S WD F H + I+D+SNGD
Sbjct: 64 RLSPWEIPRRDWFPPSFLFGAATSAYQIEGAWNEDGKGPSTWDHFCHNFPEWIVDRSNGD 123
Query: 71 VAVDHYHRYKEDIDLIAKLGFDAYRFSISWSRIFPDG-LGTKINMEGITFYNNIIDALLQ 129
VA D YH Y ED+ L+ ++G DAYRFSISW RI P G L IN + + +YN +ID LL+
Sbjct: 124 VAADSYHMYAEDVRLLKEMGMDAYRFSISWPRILPKGTLAGGINEKRVEYYNKLIDLLLE 183
Query: 130 KGIQPYVTLYHWDLPLHLHESMGGWLNKEIVKYFEIYADTCFASFGDRVKNWITINEPLQ 189
GI+PY+T++HWD P L ++ GG+L++ I+K + +A CF FG +VKNW+T NEP
Sbjct: 184 NGIEPYITIFHWDTPQALVDAYGGFLDERIIKDYTDFAKVCFEKFGKKVKNWLTFNEPET 243
Query: 190 TAVNGYCTGIFAPGRHQ----------HSSTEPYLVAHHQILAHAAAFSVYQRKYKDKQG 239
Y TG+ APGR +S +EPY+VAH+ + AHA +Y KY
Sbjct: 244 FCSVSYGTGVLAPGRCSPGVSCAVPTGNSLSEPYIVAHNLLRAHAETVDIYN-KYHKGAD 302
Query: 240 GNIGLVVDCEWAEANSDKIEDKSAAARRLDFQIGWYLHPIYYGDYPEVMRNNLGDQLPKF 299
G IGL ++ ++ D+ A R +D +GW+L P+ GDYP MR + D++P F
Sbjct: 303 GRIGLALNVFGRVPYTNTFLDQQAQERSMDKCLGWFLEPVVRGDYPFSMRVSARDRVPYF 362
Query: 300 MQKDKELVRNSLDFVGLNHYTSRFIAHATKSPEEGSFYEAQEMERLVEWEG--GEVIGEK 357
+K++E + S D +G+N+YTS F H SP + E +G G IG
Sbjct: 363 KEKEQEKLVGSYDMIGINYYTSTFSKHIDLSPNNSPVLNTDDAYASQETKGPDGNAIGPP 422
Query: 358 AASEWLYVVPWGLRKVLNYIAKTYNNPPIYVTENGMDDEENDSSPLHEMLDDKLRVRYFK 417
+ W+ + P GL +L + Y NPP+Y+TENGM D + P L+D R+ Y +
Sbjct: 423 TGNAWINMYPKGLHDILMTMKNKYGNPPMYITENGMGDIDKGDLPKPVALEDHTRLDYIQ 482
Query: 418 GYLSAVAQAIKDGADVRGYFVWSLLDNFEWAQGYTKRFGLVYVDYKNGLVRHPKSSAYWF 477
+LS + Q+I GADVRGYF WSLLDNFEW+ GYT+RFG+VYVD +NG R K SA W
Sbjct: 483 RHLSVLKQSIDLGADVRGYFAWSLLDNFEWSSGYTERFGIVYVDRENGCERTMKRSARWL 542
Query: 478 MRF 480
F
Sbjct: 543 QEF 545
>pdb|3AIS|A Chain A, Crystal Structure Of A Mutant Beta-Glucosidase In Wheat
Complexed With Dimboa-Glc
Length = 565
Score = 407 bits (1046), Expect = e-114, Method: Compositional matrix adjust.
Identities = 210/484 (43%), Positives = 289/484 (59%), Gaps = 16/484 (3%)
Query: 11 YEQAEPRNVSKTD-FPPNFVFGVATSAYQIEGACEEGNRGASIWDDFTHT-EGKIIDKSN 68
+ + +P + K D F +F+FG +TSAYQIEGA E +G S WD F HT +I D +N
Sbjct: 60 FTKLKPWQIPKRDWFDKDFLFGASTSAYQIEGAWNEDGKGPSTWDHFCHTYPERISDMTN 119
Query: 69 GDVAVDHYHRYKEDIDLIAKLGFDAYRFSISWSRIFPDGLGTKINMEGITFYNNIIDALL 128
GDVA + YH Y+ED+ + +G YRFSISWSRI PDG G K+N GI +YN +I++L+
Sbjct: 120 GDVAANSYHLYEEDVKALKDMGMKVYRFSISWSRILPDGTG-KVNQAGIDYYNKLINSLI 178
Query: 129 QKGIQPYVTLYHWDLPLHLHESMGGWLNKEIVKYFEIYADTCFASFGDRVKNWITINEPL 188
I PYVT++HWD P L + GG+LN++IV ++ +A+ CF +FGDRVKNW T N P
Sbjct: 179 DNDIVPYVTIWHWDTPQALEDKYGGFLNRQIVDDYKQFAEVCFKNFGDRVKNWFTFNAPH 238
Query: 189 QTAVNGYCTGIFAPGRHQ----------HSSTEPYLVAHHQILAHAAAFSVYQRKYKDKQ 238
Y GI APGR S EPY HH +LAHA A +++ +Y
Sbjct: 239 TYCCFSYGEGIHAPGRCSPGMDCAVPEGDSLREPYTAGHHILLAHAEAVQLFKARYNMHG 298
Query: 239 GGNIGLVVDCEWAEANSDKIEDKSAAARRLDFQIGWYLHPIYYGDYPEVMRNNLGDQLPK 298
IG+ D E D D A R +D+ +GW+L P+ GDYP MR+ +GD+LP
Sbjct: 299 DSKIGMAFDVMGYEPYQDSFLDDQARERSIDYNMGWFLEPVVRGDYPFSMRSLIGDRLPM 358
Query: 299 FMQKDKELVRNSLDFVGLNHYTSRFIAHATKSPEEGSFYEAQEMERLVEWEG--GEVIGE 356
F ++++E + +S D +GLN+YTSRF H SP+ + E G G IG
Sbjct: 359 FTKEEQEKLASSCDIMGLNYYTSRFSKHVDMSPDFTPTLNTDDAYASSETTGSDGNDIGP 418
Query: 357 KAASEWLYVVPWGLRKVLNYIAKTYNNPPIYVTENGMDDEENDSSPLHEMLDDKLRVRYF 416
+ W+Y+ P GL +L + + Y NPP+++TENG+ D E D S + + LDD R+ Y
Sbjct: 419 ITGTYWIYMYPKGLTDLLLIMKEKYGNPPVFITENGIADVEGDES-MPDPLDDWKRLDYL 477
Query: 417 KGYLSAVAQAIKDGADVRGYFVWSLLDNFEWAQGYTKRFGLVYVDYKNGLVRHPKSSAYW 476
+ ++SAV AI GADVRG+F W L+DNFEW+ GY+ RFGLVY+D +G R K SA W
Sbjct: 478 QRHISAVKDAIDQGADVRGHFTWGLIDNFEWSLGYSSRFGLVYIDKNDGNKRKLKKSAKW 537
Query: 477 FMRF 480
F +F
Sbjct: 538 FSKF 541
>pdb|1V02|A Chain A, Crystal Structure Of The Sorghum Bicolor Dhurrinase 1
pdb|1V02|B Chain B, Crystal Structure Of The Sorghum Bicolor Dhurrinase 1
pdb|1V02|C Chain C, Crystal Structure Of The Sorghum Bicolor Dhurrinase 1
pdb|1V02|D Chain D, Crystal Structure Of The Sorghum Bicolor Dhurrinase 1
pdb|1V02|F Chain F, Crystal Structure Of The Sorghum Bicolor Dhurrinase 1
Length = 565
Score = 406 bits (1043), Expect = e-113, Method: Compositional matrix adjust.
Identities = 210/483 (43%), Positives = 287/483 (59%), Gaps = 16/483 (3%)
Query: 13 QAEPRNVSKTD-FPPNFVFGVATSAYQIEGACEEGNRGASIWDDFTHTEGK-IIDKSNGD 70
+ P + + D FPP+F+FG ATSAYQIEGA E +G S WD F H + I+D+SNGD
Sbjct: 64 RLSPWEIPRRDWFPPSFLFGAATSAYQIEGAWNEDGKGPSTWDHFCHNFPEWIVDRSNGD 123
Query: 71 VAVDHYHRYKEDIDLIAKLGFDAYRFSISWSRIFPDG-LGTKINMEGITFYNNIIDALLQ 129
VA D YH Y ED+ L+ ++G DAYRFSISW RI P G L IN + + +YN +ID LL+
Sbjct: 124 VAADSYHMYAEDVRLLKEMGMDAYRFSISWPRILPKGTLAGGINEKRVEYYNKLIDLLLE 183
Query: 130 KGIQPYVTLYHWDLPLHLHESMGGWLNKEIVKYFEIYADTCFASFGDRVKNWITINEPLQ 189
GI+PY+T++HWD P L ++ GG+L++ I+K + +A CF FG VKNW+T NEP
Sbjct: 184 NGIEPYITIFHWDTPQALVDAYGGFLDERIIKDYTDFAKVCFEKFGKTVKNWLTFNEPET 243
Query: 190 TAVNGYCTGIFAPGRHQ----------HSSTEPYLVAHHQILAHAAAFSVYQRKYKDKQG 239
Y TG+ APGR +S +EPY+VAH+ + AHA +Y KY
Sbjct: 244 FCSVSYGTGVLAPGRCSPGVSCAVPTGNSLSEPYIVAHNLLRAHAETVDIYN-KYHKGAD 302
Query: 240 GNIGLVVDCEWAEANSDKIEDKSAAARRLDFQIGWYLHPIYYGDYPEVMRNNLGDQLPKF 299
G IGL ++ ++ D+ A R +D +GW+L P+ GDYP MR + D++P F
Sbjct: 303 GRIGLALNVFGRVPYTNTFLDQQAQERSMDKCLGWFLEPVVRGDYPFSMRVSARDRVPYF 362
Query: 300 MQKDKELVRNSLDFVGLNHYTSRFIAHATKSPEEGSFYEAQEMERLVEWEG--GEVIGEK 357
+K++E + S D +G+N+YTS F H SP + E +G G IG
Sbjct: 363 KEKEQEKLVGSYDMIGINYYTSTFSKHIDLSPNNSPVLNTDDAYASQETKGPDGNAIGPP 422
Query: 358 AASEWLYVVPWGLRKVLNYIAKTYNNPPIYVTENGMDDEENDSSPLHEMLDDKLRVRYFK 417
+ W+ + P GL +L + Y NPP+Y+TENGM D + P L+D R+ Y +
Sbjct: 423 TGNAWINMYPKGLHDILMTMKNKYGNPPMYITENGMGDIDKGDLPKPVALEDHTRLDYIQ 482
Query: 418 GYLSAVAQAIKDGADVRGYFVWSLLDNFEWAQGYTKRFGLVYVDYKNGLVRHPKSSAYWF 477
+LS + Q+I GADVRGYF WSLLDNFEW+ GYT+RFG+VYVD +NG R K SA W
Sbjct: 483 RHLSVLKQSIDLGADVRGYFAWSLLDNFEWSSGYTERFGIVYVDRENGCERTMKRSARWL 542
Query: 478 MRF 480
F
Sbjct: 543 QEF 545
>pdb|2E3Z|A Chain A, Crystal Structure Of Intracellular Family 1 Beta-
Glucosidase Bgl1a From The Basidiomycete Phanerochaete
Chrysosporium In Substrate-Free Form
pdb|2E3Z|B Chain B, Crystal Structure Of Intracellular Family 1 Beta-
Glucosidase Bgl1a From The Basidiomycete Phanerochaete
Chrysosporium In Substrate-Free Form
pdb|2E40|A Chain A, Crystal Structure Of Intracellular Family 1 Beta-
Glucosidase Bgl1a From The Basidiomycete Phanerochaete
Chrysosporium In Complex With Gluconolactone
pdb|2E40|B Chain B, Crystal Structure Of Intracellular Family 1 Beta-
Glucosidase Bgl1a From The Basidiomycete Phanerochaete
Chrysosporium In Complex With Gluconolactone
Length = 465
Score = 401 bits (1030), Expect = e-112, Method: Compositional matrix adjust.
Identities = 214/466 (45%), Positives = 291/466 (62%), Gaps = 13/466 (2%)
Query: 19 VSKTDFPPNFVFGVATSAYQIEGACEEGNRGASIWDDFTHTEGKIIDKSNGDVAVDHYHR 78
+S P +FV+G AT+AYQIEG+ ++ R SIWD F GKI D S+GDVA D Y+R
Sbjct: 4 MSAAKLPKSFVWGYATAAYQIEGSPDKDGREPSIWDTFCKAPGKIADGSSGDVATDSYNR 63
Query: 79 YKEDIDLIAKLGFDAYRFSISWSRIFPDG-LGTKINMEGITFYNNIIDALLQKGIQPYVT 137
++ED+ L+ G AYRFS+SWSRI P G +N GI Y +I+ L+++GI P+VT
Sbjct: 64 WREDVQLLKSYGVKAYRFSLSWSRIIPKGGRSDPVNGAGIKHYRTLIEELVKEGITPFVT 123
Query: 138 LYHWDLPLHLHESMGGWLNKE-IVKYFEIYADTCFASFGDRVKNWITINEPLQTAVNGYC 196
LYHWDLP L + GGWLNKE ++ F YA CF SFGD V+NWIT NEP +V GY
Sbjct: 124 LYHWDLPQALDDRYGGWLNKEEAIQDFTNYAKLCFESFGDLVQNWITFNEPWVISVMGYG 183
Query: 197 TGIFAPGRHQHSSTEPYLVAHHQILAHAAAFSVYQRKYKDKQGGNIGLVVDCEWAEANSD 256
GIFAPG S+TEP++V+HH ILAHA A +Y+ ++K+KQGG IG+ +D W D
Sbjct: 184 NGIFAPG--HVSNTEPWIVSHHIILAHAHAVKLYRDEFKEKQGGQIGITLDSHWLIPYDD 241
Query: 257 KIEDKSAAARRLDFQIGWYLHPIYYGDYPEVMRNNLGDQLPKFMQKDKELVRNSLDFVGL 316
K A R ++F++G + +PIY G+YP ++ LGD+LP+F ++ ELV+ S DF GL
Sbjct: 242 TDASKEATLRAMEFKLGRFANPIYKGEYPPRIKKILGDRLPEFTPEEIELVKGSSDFFGL 301
Query: 317 NHYTSRFIAHATKSPEEGSFYEAQEMERLVEWEGGEVIGEKAASEWLYVVPWGLRKVLNY 376
N YT+ + S E F + G +G ++ WL G R +LNY
Sbjct: 302 NTYTTHLVQDG-GSDELAGFVKTGHTR-----ADGTQLGTQSDMGWLQTYGPGFRWLLNY 355
Query: 377 IAKTYNNPPIYVTENGMDDEENDSSPLHEMLDDKLRVRYFKGYLSAVAQAI-KDGADVRG 435
+ K Y+ P+YVTENG + + P+ + +DD R Y++ Y A+ QA+ +DGADVRG
Sbjct: 356 LWKAYDK-PVYVTENGFPVKGENDLPVEQAVDDTDRQAYYRDYTEALLQAVTEDGADVRG 414
Query: 436 YFVWSLLDNFEWAQGYTKRFGLVYVDYKNGLVRHPKSSAYWFMRFL 481
YF WSLLDNFEWA+GY RFG+ +VDY+ R PK SA + R+
Sbjct: 415 YFGWSLLDNFEWAEGYKVRFGVTHVDYET-QKRTPKKSAEFLSRWF 459
>pdb|3AHY|A Chain A, Crystal Structure Of Beta-Glucosidase 2 From Fungus
Trichoderma Reesei In Complex With Tris
pdb|3AHY|B Chain B, Crystal Structure Of Beta-Glucosidase 2 From Fungus
Trichoderma Reesei In Complex With Tris
pdb|3AHY|C Chain C, Crystal Structure Of Beta-Glucosidase 2 From Fungus
Trichoderma Reesei In Complex With Tris
pdb|3AHY|D Chain D, Crystal Structure Of Beta-Glucosidase 2 From Fungus
Trichoderma Reesei In Complex With Tris
Length = 473
Score = 395 bits (1016), Expect = e-110, Method: Compositional matrix adjust.
Identities = 210/456 (46%), Positives = 279/456 (61%), Gaps = 10/456 (2%)
Query: 24 FPPNFVFGVATSAYQIEGACEEGNRGASIWDDFTHTEGKIIDKSNGDVAVDHYHRYKEDI 83
P +F +G AT+AYQIEGA ++ RG SIWD F GKI D S+G A D Y+R EDI
Sbjct: 9 LPKDFQWGFATAAYQIEGAVDQDGRGPSIWDTFCAQPGKIADGSSGVTACDSYNRTAEDI 68
Query: 84 DLIAKLGFDAYRFSISWSRIFPD-GLGTKINMEGITFYNNIIDALLQKGIQPYVTLYHWD 142
L+ LG +YRFSISWSRI P+ G G +N GI Y +D LL GI P++TL+HWD
Sbjct: 69 ALLKSLGAKSYRFSISWSRIIPEGGRGDAVNQAGIDHYVKFVDDLLDAGITPFITLFHWD 128
Query: 143 LPLHLHESMGGWLNK-EIVKYFEIYADTCFASFGDRVKNWITINEPLQTAVNGYCTGIFA 201
LP LH+ GG LN+ E FE YA F + +V+NWIT NEPL +A+ GY +G FA
Sbjct: 129 LPEGLHQRYGGLLNRTEFPLDFENYARVMFRAL-PKVRNWITFNEPLCSAIPGYGSGTFA 187
Query: 202 PGRHQHSSTEPYLVAHHQILAHAAAFSVYQRKYKDKQG-GNIGLVVDCEWAEA-NSDKIE 259
PGR S++EP+ V H+ ++AH A Y+ +K G G IG+V++ ++ ++
Sbjct: 188 PGR--QSTSEPWTVGHNILVAHGRAVKAYRDDFKPASGDGQIGIVLNGDFTYPWDAADPA 245
Query: 260 DKSAAARRLDFQIGWYLHPIYYGDYPEVMRNNLGDQLPKFMQKDKELVRNSLDFVGLNHY 319
DK AA RRL+F W+ PIY GDYP MR LGD+LP F +++ LV S DF G+NHY
Sbjct: 246 DKEAAERRLEFFTAWFADPIYLGDYPASMRKQLGDRLPTFTPEERALVHGSNDFYGMNHY 305
Query: 320 TSRFIAHATKSPEEGSFYEAQEMERLVEWEGGEVIGEKAASEWLYVVPWGLRKVLNYIAK 379
TS +I H +S + ++ L + G IG + S WL G R L +I+K
Sbjct: 306 TSNYIRH--RSSPASADDTVGNVDVLFTNKQGNCIGPETQSPWLRPCAAGFRDFLVWISK 363
Query: 380 TYNNPPIYVTENGMDDEENDSSPLHEMLDDKLRVRYFKGYLSAVAQAIK-DGADVRGYFV 438
Y PPIYVTENG + P ++L+D RV+Y+ Y+ A+ A++ DG +V+GYF
Sbjct: 364 RYGYPPIYVTENGTSIKGESDLPKEKILEDDFRVKYYNEYIRAMVTAVELDGVNVKGYFA 423
Query: 439 WSLLDNFEWAQGYTKRFGLVYVDYKNGLVRHPKSSA 474
WSL+DNFEWA GY RFG+ YVDY+NG R PK SA
Sbjct: 424 WSLMDNFEWADGYVTRFGVTYVDYENGQKRFPKKSA 459
>pdb|1E1E|A Chain A, Crystal Structure Of A Monocot (Maize Zmglu1)
Beta-Glucosidase
pdb|1E1E|B Chain B, Crystal Structure Of A Monocot (Maize Zmglu1)
Beta-Glucosidase
pdb|1E1F|A Chain A, Crystal Structure Of A Monocot (Maize Zmglu1)
Beta-Glucosidase In Complex With
P-Nitrophenyl-Beta-D-Thioglucoside
pdb|1E1F|B Chain B, Crystal Structure Of A Monocot (Maize Zmglu1)
Beta-Glucosidase In Complex With
P-Nitrophenyl-Beta-D-Thioglucoside
Length = 512
Score = 383 bits (983), Expect = e-106, Method: Compositional matrix adjust.
Identities = 204/489 (41%), Positives = 282/489 (57%), Gaps = 21/489 (4%)
Query: 12 EQAEPRNVSKTD-FPPNFVFGVATSAYQIEGACEEGNRGASIWDDFTHTEG-KIIDKSNG 69
+ P + + D FP +F FG ATSAYQIEGA E +G S WD F H +I+D SN
Sbjct: 11 QMLSPSEIPQRDWFPSDFTFGAATSAYQIEGAWNEDGKGESNWDHFCHNHPERILDGSNS 70
Query: 70 DVAVDHYHRYKEDIDLIAKLGFDAYRFSISWSRIFPDGLGTK-INMEGITFYNNIIDALL 128
D+ + YH YK D+ L+ ++G DAYRFSISW RI P G IN +GI +Y N+I+ LL
Sbjct: 71 DIGANSYHMYKTDVRLLKEMGMDAYRFSISWPRILPKGTKEGGINPDGIKYYRNLINLLL 130
Query: 129 QKGIQPYVTLYHWDLPLHLHESMGGWLNKE---IVKYFEIYADTCFASFGDRVKNWITIN 185
+ GI+PYVT++HWD+P L E GG+L+K IV+ + +A CF +FGD+VKNW+T N
Sbjct: 131 ENGIEPYVTIFHWDVPQALEEKYGGFLDKSHKSIVEDYTYFAKVCFDNFGDKVKNWLTFN 190
Query: 186 EPLQTAVNGYCTGIFAPGRHQ----------HSSTEPYLVAHHQILAHAAAFSVYQRKYK 235
EP Y TG+FAPGR +S EPY H+ +LAHA A +Y + YK
Sbjct: 191 EPQTFTSFSYGTGVFAPGRCSPGLDCAYPTGNSLVEPYTAGHNILLAHAEAVDLYNKHYK 250
Query: 236 DKQGGNIGLVVDCEWAEANSDKIEDKSAAARRLDFQIGWYLHPIYYGDYPEVMRNNLGDQ 295
+ IGL D DK A R D +GW+L P+ GDYP MR+ ++
Sbjct: 251 -RDDTRIGLAFDVMGRVPYGTSFLDKQAEERSWDINLGWFLEPVVRGDYPFSMRSLARER 309
Query: 296 LPKFMQKDKELVRNSLDFVGLNHYTSRFIAHATKSPEEGSFYEAQEMERLVEWEG--GEV 353
LP F + KE + S + +GLN+YTSRF + SP + E G G+
Sbjct: 310 LPFFKDEQKEKLAGSYNMLGLNYYTSRFSKNIDISPNYSPVLNTDDAYASQEVNGPDGKP 369
Query: 354 IGEKAASEWLYVVPWGLRKVLNYIAKTYNNPPIYVTENGMDDEENDSSPL--HEMLDDKL 411
IG + W+Y+ P GL+ +L + Y NPPIY+TENG+ D + +PL L+D
Sbjct: 370 IGPPMGNPWIYMYPEGLKDLLMIMKNKYGNPPIYITENGIGDVDTKETPLPMEAALNDYK 429
Query: 412 RVRYFKGYLSAVAQAIKDGADVRGYFVWSLLDNFEWAQGYTKRFGLVYVDYKNGLVRHPK 471
R+ Y + +++ + ++I G++V+GYF WSLLDNFEW G+T+R+G+VYVD N R+ K
Sbjct: 430 RLDYIQRHIATLKESIDLGSNVQGYFAWSLLDNFEWFAGFTERYGIVYVDRNNNCTRYMK 489
Query: 472 SSAYWFMRF 480
SA W F
Sbjct: 490 ESAKWLKEF 498
>pdb|1HXJ|A Chain A, Crystal Structure Of The Maize Zm-P60.1 Beta-Glucosidase
pdb|1HXJ|B Chain B, Crystal Structure Of The Maize Zm-P60.1 Beta-Glucosidase
Length = 507
Score = 382 bits (982), Expect = e-106, Method: Compositional matrix adjust.
Identities = 204/489 (41%), Positives = 282/489 (57%), Gaps = 21/489 (4%)
Query: 12 EQAEPRNVSKTD-FPPNFVFGVATSAYQIEGACEEGNRGASIWDDFTHTEG-KIIDKSNG 69
+ P + + D FP +F FG ATSAYQIEGA E +G S WD F H +I+D SN
Sbjct: 6 QMLSPSEIPQRDWFPSDFTFGAATSAYQIEGAWNEDGKGESNWDHFCHNHPERILDGSNS 65
Query: 70 DVAVDHYHRYKEDIDLIAKLGFDAYRFSISWSRIFPDGLGTK-INMEGITFYNNIIDALL 128
D+ + YH YK D+ L+ ++G DAYRFSISW RI P G IN +GI +Y N+I+ LL
Sbjct: 66 DIGANSYHMYKTDVRLLKEMGMDAYRFSISWPRILPKGTKEGGINPDGIKYYRNLINLLL 125
Query: 129 QKGIQPYVTLYHWDLPLHLHESMGGWLNKE---IVKYFEIYADTCFASFGDRVKNWITIN 185
+ GI+PYVT++HWD+P L E GG+L+K IV+ + +A CF +FGD+VKNW+T N
Sbjct: 126 ENGIEPYVTIFHWDVPQALEEKYGGFLDKSHKSIVEDYTYFAKVCFDNFGDKVKNWLTFN 185
Query: 186 EPLQTAVNGYCTGIFAPGRHQ----------HSSTEPYLVAHHQILAHAAAFSVYQRKYK 235
EP Y TG+FAPGR +S EPY H+ +LAHA A +Y + YK
Sbjct: 186 EPQTFTSFSYGTGVFAPGRCSPGLDCAYPTGNSLVEPYTAGHNILLAHAEAVDLYNKHYK 245
Query: 236 DKQGGNIGLVVDCEWAEANSDKIEDKSAAARRLDFQIGWYLHPIYYGDYPEVMRNNLGDQ 295
+ IGL D DK A R D +GW+L P+ GDYP MR+ ++
Sbjct: 246 -RDDTRIGLAFDVMGRVPYGTSFLDKQAEERSWDINLGWFLEPVVRGDYPFSMRSLARER 304
Query: 296 LPKFMQKDKELVRNSLDFVGLNHYTSRFIAHATKSPEEGSFYEAQEMERLVEWEG--GEV 353
LP F + KE + S + +GLN+YTSRF + SP + E G G+
Sbjct: 305 LPFFKDEQKEKLAGSYNMLGLNYYTSRFSKNIDISPNYSPVLNTDDAYASQEVNGPDGKP 364
Query: 354 IGEKAASEWLYVVPWGLRKVLNYIAKTYNNPPIYVTENGMDDEENDSSPL--HEMLDDKL 411
IG + W+Y+ P GL+ +L + Y NPPIY+TENG+ D + +PL L+D
Sbjct: 365 IGPPMGNPWIYMYPEGLKDLLMIMKNKYGNPPIYITENGIGDVDTKETPLPMEAALNDYK 424
Query: 412 RVRYFKGYLSAVAQAIKDGADVRGYFVWSLLDNFEWAQGYTKRFGLVYVDYKNGLVRHPK 471
R+ Y + +++ + ++I G++V+GYF WSLLDNFEW G+T+R+G+VYVD N R+ K
Sbjct: 425 RLDYIQRHIATLKESIDLGSNVQGYFAWSLLDNFEWFAGFTERYGIVYVDRNNNCTRYMK 484
Query: 472 SSAYWFMRF 480
SA W F
Sbjct: 485 ESAKWLKEF 493
>pdb|1H49|A Chain A, Crystal Structure Of The Inactive Double Mutant Of The
Maize Beta-Glucosidase Zmglu1-E191d-F198v In Complex
With Dimboa-Glucoside
pdb|1H49|B Chain B, Crystal Structure Of The Inactive Double Mutant Of The
Maize Beta-Glucosidase Zmglu1-E191d-F198v In Complex
With Dimboa-Glucoside
Length = 512
Score = 382 bits (980), Expect = e-106, Method: Compositional matrix adjust.
Identities = 203/489 (41%), Positives = 282/489 (57%), Gaps = 21/489 (4%)
Query: 12 EQAEPRNVSKTD-FPPNFVFGVATSAYQIEGACEEGNRGASIWDDFTHTEG-KIIDKSNG 69
+ P + + D FP +F FG ATSAYQIEGA E +G S WD F H +I+D SN
Sbjct: 11 QMLSPSEIPQRDWFPSDFTFGAATSAYQIEGAWNEDGKGESNWDHFCHNHPERILDGSNS 70
Query: 70 DVAVDHYHRYKEDIDLIAKLGFDAYRFSISWSRIFPDGLGTK-INMEGITFYNNIIDALL 128
D+ + YH YK D+ L+ ++G DAYRFSISW RI P G IN +GI +Y N+I+ LL
Sbjct: 71 DIGANSYHMYKTDVRLLKEMGMDAYRFSISWPRILPKGTKEGGINPDGIKYYRNLINLLL 130
Query: 129 QKGIQPYVTLYHWDLPLHLHESMGGWLNKE---IVKYFEIYADTCFASFGDRVKNWITIN 185
+ GI+PYVT++HWD+P L E GG+L+K IV+ + +A CF +FGD+VKNW+T N
Sbjct: 131 ENGIEPYVTIFHWDVPQALEEKYGGFLDKSHKSIVEDYTYFAKVCFDNFGDKVKNWLTFN 190
Query: 186 EPLQTAVNGYCTGIFAPGRHQ----------HSSTEPYLVAHHQILAHAAAFSVYQRKYK 235
+P Y TG+FAPGR +S EPY H+ +LAHA A +Y + YK
Sbjct: 191 DPQTFTSVSYGTGVFAPGRCSPGLDCAYPTGNSLVEPYTAGHNILLAHAEAVDLYNKHYK 250
Query: 236 DKQGGNIGLVVDCEWAEANSDKIEDKSAAARRLDFQIGWYLHPIYYGDYPEVMRNNLGDQ 295
+ IGL D DK A R D +GW+L P+ GDYP MR+ ++
Sbjct: 251 -RDDTRIGLAFDVMGRVPYGTSFLDKQAEERSWDINLGWFLEPVVRGDYPFSMRSLARER 309
Query: 296 LPKFMQKDKELVRNSLDFVGLNHYTSRFIAHATKSPEEGSFYEAQEMERLVEWEG--GEV 353
LP F + KE + S + +GLN+YTSRF + SP + E G G+
Sbjct: 310 LPFFKDEQKEKLAGSYNMLGLNYYTSRFSKNIDISPNYSPVLNTDDAYASQEVNGPDGKP 369
Query: 354 IGEKAASEWLYVVPWGLRKVLNYIAKTYNNPPIYVTENGMDDEENDSSPL--HEMLDDKL 411
IG + W+Y+ P GL+ +L + Y NPPIY+TENG+ D + +PL L+D
Sbjct: 370 IGPPMGNPWIYMYPEGLKDLLMIMKNKYGNPPIYITENGIGDVDTKETPLPMEAALNDYK 429
Query: 412 RVRYFKGYLSAVAQAIKDGADVRGYFVWSLLDNFEWAQGYTKRFGLVYVDYKNGLVRHPK 471
R+ Y + +++ + ++I G++V+GYF WSLLDNFEW G+T+R+G+VYVD N R+ K
Sbjct: 430 RLDYIQRHIATLKESIDLGSNVQGYFAWSLLDNFEWFAGFTERYGIVYVDRNNNCTRYMK 489
Query: 472 SSAYWFMRF 480
SA W F
Sbjct: 490 ESAKWLKEF 498
>pdb|1E4L|A Chain A, Crystal Structure Of The Inactive Mutant Monocot (Maize
Zmglu1) Beta-Glucosidase Zm Glu191asp
pdb|1E4L|B Chain B, Crystal Structure Of The Inactive Mutant Monocot (Maize
Zmglu1) Beta-Glucosidase Zm Glu191asp
pdb|1E4N|A Chain A, Crystal Structure Of The Inactive Mutant Monocot (Maize
Zmglu1) Beta-Glucosidase Zmglu E191d In Complex With The
Natural Aglycone Dimboa
pdb|1E4N|B Chain B, Crystal Structure Of The Inactive Mutant Monocot (Maize
Zmglu1) Beta-Glucosidase Zmglu E191d In Complex With The
Natural Aglycone Dimboa
pdb|1E55|A Chain A, Crystal Structure Of The Inactive Mutant Monocot (Maize
Zmglu1) Beta-Glucosidase Zmglue191d In Complex With The
Competitive Inhibitor Dhurrin
pdb|1E55|B Chain B, Crystal Structure Of The Inactive Mutant Monocot (Maize
Zmglu1) Beta-Glucosidase Zmglue191d In Complex With The
Competitive Inhibitor Dhurrin
pdb|1E56|A Chain A, Crystal Structure Of The Inactive Mutant Monocot (Maize
Zmglu1) Beta-Glucosidase Zmglue191d In Complex With The
Natural Substrate Dimboa-Beta-D-Glucoside
pdb|1E56|B Chain B, Crystal Structure Of The Inactive Mutant Monocot (Maize
Zmglu1) Beta-Glucosidase Zmglue191d In Complex With The
Natural Substrate Dimboa-Beta-D-Glucoside
pdb|1V08|A Chain A, Crystal Structure Of The Zea Maze Beta-Glucosidase-1 In
Complex With Gluco-Tetrazole
pdb|1V08|B Chain B, Crystal Structure Of The Zea Maze Beta-Glucosidase-1 In
Complex With Gluco-Tetrazole
Length = 512
Score = 381 bits (979), Expect = e-106, Method: Compositional matrix adjust.
Identities = 203/489 (41%), Positives = 282/489 (57%), Gaps = 21/489 (4%)
Query: 12 EQAEPRNVSKTD-FPPNFVFGVATSAYQIEGACEEGNRGASIWDDFTHTEG-KIIDKSNG 69
+ P + + D FP +F FG ATSAYQIEGA E +G S WD F H +I+D SN
Sbjct: 11 QMLSPSEIPQRDWFPSDFTFGAATSAYQIEGAWNEDGKGESNWDHFCHNHPERILDGSNS 70
Query: 70 DVAVDHYHRYKEDIDLIAKLGFDAYRFSISWSRIFPDGLGTK-INMEGITFYNNIIDALL 128
D+ + YH YK D+ L+ ++G DAYRFSISW RI P G IN +GI +Y N+I+ LL
Sbjct: 71 DIGANSYHMYKTDVRLLKEMGMDAYRFSISWPRILPKGTKEGGINPDGIKYYRNLINLLL 130
Query: 129 QKGIQPYVTLYHWDLPLHLHESMGGWLNKE---IVKYFEIYADTCFASFGDRVKNWITIN 185
+ GI+PYVT++HWD+P L E GG+L+K IV+ + +A CF +FGD+VKNW+T N
Sbjct: 131 ENGIEPYVTIFHWDVPQALEEKYGGFLDKSHKSIVEDYTYFAKVCFDNFGDKVKNWLTFN 190
Query: 186 EPLQTAVNGYCTGIFAPGRHQ----------HSSTEPYLVAHHQILAHAAAFSVYQRKYK 235
+P Y TG+FAPGR +S EPY H+ +LAHA A +Y + YK
Sbjct: 191 DPQTFTSFSYGTGVFAPGRCSPGLDCAYPTGNSLVEPYTAGHNILLAHAEAVDLYNKHYK 250
Query: 236 DKQGGNIGLVVDCEWAEANSDKIEDKSAAARRLDFQIGWYLHPIYYGDYPEVMRNNLGDQ 295
+ IGL D DK A R D +GW+L P+ GDYP MR+ ++
Sbjct: 251 -RDDTRIGLAFDVMGRVPYGTSFLDKQAEERSWDINLGWFLEPVVRGDYPFSMRSLARER 309
Query: 296 LPKFMQKDKELVRNSLDFVGLNHYTSRFIAHATKSPEEGSFYEAQEMERLVEWEG--GEV 353
LP F + KE + S + +GLN+YTSRF + SP + E G G+
Sbjct: 310 LPFFKDEQKEKLAGSYNMLGLNYYTSRFSKNIDISPNYSPVLNTDDAYASQEVNGPDGKP 369
Query: 354 IGEKAASEWLYVVPWGLRKVLNYIAKTYNNPPIYVTENGMDDEENDSSPL--HEMLDDKL 411
IG + W+Y+ P GL+ +L + Y NPPIY+TENG+ D + +PL L+D
Sbjct: 370 IGPPMGNPWIYMYPEGLKDLLMIMKNKYGNPPIYITENGIGDVDTKETPLPMEAALNDYK 429
Query: 412 RVRYFKGYLSAVAQAIKDGADVRGYFVWSLLDNFEWAQGYTKRFGLVYVDYKNGLVRHPK 471
R+ Y + +++ + ++I G++V+GYF WSLLDNFEW G+T+R+G+VYVD N R+ K
Sbjct: 430 RLDYIQRHIATLKESIDLGSNVQGYFAWSLLDNFEWFAGFTERYGIVYVDRNNNCTRYMK 489
Query: 472 SSAYWFMRF 480
SA W F
Sbjct: 490 ESAKWLKEF 498
>pdb|1OD0|A Chain A, Family 1 B-Glucosidase From Thermotoga Maritima
pdb|1OD0|B Chain B, Family 1 B-Glucosidase From Thermotoga Maritima
pdb|1OIF|A Chain A, Family 1 B-glucosidase From Thermotoga Maritima
pdb|1OIF|B Chain B, Family 1 B-glucosidase From Thermotoga Maritima
pdb|1OIM|A Chain A, Family 1 B-Glucosidase From Thermotoga Maritima
pdb|1OIM|B Chain B, Family 1 B-Glucosidase From Thermotoga Maritima
pdb|1OIN|A Chain A, Family 1 B-Glucosidase From Thermotoga Maritima
pdb|1OIN|B Chain B, Family 1 B-Glucosidase From Thermotoga Maritima
pdb|1W3J|A Chain A, Family 1 B-Glucosidase From Thermotoga Maritima In Complex
With Tetrahydrooxazine
pdb|1W3J|B Chain B, Family 1 B-Glucosidase From Thermotoga Maritima In Complex
With Tetrahydrooxazine
pdb|1UZ1|A Chain A, Family 1 B-Glucosidase From Thermotoga Maritima In Complex
With Isofagomine Lactam
pdb|1UZ1|B Chain B, Family 1 B-Glucosidase From Thermotoga Maritima In Complex
With Isofagomine Lactam
pdb|2CBU|A Chain A, Beta-Glucosidase From Thermotoga Maritima In Complex With
Castanospermine
pdb|2CBU|B Chain B, Beta-Glucosidase From Thermotoga Maritima In Complex With
Castanospermine
pdb|2CBV|A Chain A, Beta-Glucosidase From Thermotoga Maritima In Complex With
Calystegine B2
pdb|2CBV|B Chain B, Beta-Glucosidase From Thermotoga Maritima In Complex With
Calystegine B2
pdb|2CES|A Chain A, Beta-Glucosidase From Thermotoga Maritima In Complex With
Glucoimidazole
pdb|2CES|B Chain B, Beta-Glucosidase From Thermotoga Maritima In Complex With
Glucoimidazole
pdb|2CET|A Chain A, Beta-Glucosidase From Thermotoga Maritima In Complex With
Phenethyl-Substituted Glucoimidazole
pdb|2CET|B Chain B, Beta-Glucosidase From Thermotoga Maritima In Complex With
Phenethyl-Substituted Glucoimidazole
pdb|2J77|A Chain A, Beta-Glucosidase From Thermotoga Maritima In Complex With
Deoxynojirimycin
pdb|2J77|B Chain B, Beta-Glucosidase From Thermotoga Maritima In Complex With
Deoxynojirimycin
pdb|2J78|A Chain A, Beta-Glucosidase From Thermotoga Maritima In Complex With
Gluco-Hydroximolactam
pdb|2J78|B Chain B, Beta-Glucosidase From Thermotoga Maritima In Complex With
Gluco-Hydroximolactam
pdb|2J79|A Chain A, Beta-Glucosidase From Thermotoga Maritima In Complex With
Galacto-Hydroximolactam
pdb|2J79|B Chain B, Beta-Glucosidase From Thermotoga Maritima In Complex With
Galacto-Hydroximolactam
pdb|2J7B|A Chain A, Beta-Glucosidase From Thermotoga Maritima In Complex With
Gluco-Tetrazole
pdb|2J7B|B Chain B, Beta-Glucosidase From Thermotoga Maritima In Complex With
Gluco-Tetrazole
pdb|2J7C|A Chain A, Beta-Glucosidase From Thermotoga Maritima In Complex With
Phenylaminomethyl-Derived Glucoimidazole
pdb|2J7C|B Chain B, Beta-Glucosidase From Thermotoga Maritima In Complex With
Phenylaminomethyl-Derived Glucoimidazole
pdb|2J7D|A Chain A, Beta-glucosidase From Thermotoga Maritima In Complex With
Methoxycarbonyl-substituted Glucoimidazole
pdb|2J7D|B Chain B, Beta-glucosidase From Thermotoga Maritima In Complex With
Methoxycarbonyl-substituted Glucoimidazole
pdb|2J7E|A Chain A, Beta-Glucosidase From Thermotoga Maritima In Complex With
Methyl Acetate-Substituted Glucoimidazole
pdb|2J7E|B Chain B, Beta-Glucosidase From Thermotoga Maritima In Complex With
Methyl Acetate-Substituted Glucoimidazole
pdb|2J7F|A Chain A, Beta-glucosidase From Thermotoga Maritima In Complex With
Carboxylate-substituted Glucoimidazole
pdb|2J7F|B Chain B, Beta-glucosidase From Thermotoga Maritima In Complex With
Carboxylate-substituted Glucoimidazole
pdb|2J7G|A Chain A, Beta-glucosidase From Thermotoga Maritima In Complex With
Methyl Acetic Acid-substituted Glucoimidazole
pdb|2J7G|B Chain B, Beta-glucosidase From Thermotoga Maritima In Complex With
Methyl Acetic Acid-substituted Glucoimidazole
pdb|2J7H|A Chain A, Beta-glucosidase From Thermotoga Maritima In Complex With
Azafagomine
pdb|2J7H|B Chain B, Beta-glucosidase From Thermotoga Maritima In Complex With
Azafagomine
pdb|2J75|A Chain A, Beta-glucosidase From Thermotoga Maritima In Complex With
Noeuromycin
pdb|2J75|B Chain B, Beta-glucosidase From Thermotoga Maritima In Complex With
Noeuromycin
pdb|2JAL|A Chain A, Beta-Glucosidase From Thermotoga Maritima In Complex With
Cyclophellitol
pdb|2JAL|B Chain B, Beta-Glucosidase From Thermotoga Maritima In Complex With
Cyclophellitol
pdb|2VRJ|A Chain A, Beta-Glucosidase From Thermotoga Maritima In Complex With
N- Octyl-5-Deoxy-6-Oxa-N-(Thio)carbamoylcalystegine
pdb|2VRJ|B Chain B, Beta-Glucosidase From Thermotoga Maritima In Complex With
N- Octyl-5-Deoxy-6-Oxa-N-(Thio)carbamoylcalystegine
pdb|2WBG|A Chain A, Structure Of Family 1 Beta-Glucosidase From Thermotoga
Maritima In Complex With
3-Imino-2-Oxa-(+)-Castanospermine
pdb|2WBG|B Chain B, Structure Of Family 1 Beta-Glucosidase From Thermotoga
Maritima In Complex With
3-Imino-2-Oxa-(+)-Castanospermine
pdb|2WBG|C Chain C, Structure Of Family 1 Beta-Glucosidase From Thermotoga
Maritima In Complex With
3-Imino-2-Oxa-(+)-Castanospermine
pdb|2WBG|D Chain D, Structure Of Family 1 Beta-Glucosidase From Thermotoga
Maritima In Complex With
3-Imino-2-Oxa-(+)-Castanospermine
pdb|2WC3|A Chain A, Structure Of Family 1 Beta-Glucosidase From Thermotoga
Maritima In Complex With 3-Imino-2-Oxa-(+)-8-Epi-
Castanospermine
pdb|2WC3|B Chain B, Structure Of Family 1 Beta-Glucosidase From Thermotoga
Maritima In Complex With 3-Imino-2-Oxa-(+)-8-Epi-
Castanospermine
pdb|2WC3|C Chain C, Structure Of Family 1 Beta-Glucosidase From Thermotoga
Maritima In Complex With 3-Imino-2-Oxa-(+)-8-Epi-
Castanospermine
pdb|2WC3|D Chain D, Structure Of Family 1 Beta-Glucosidase From Thermotoga
Maritima In Complex With 3-Imino-2-Oxa-(+)-8-Epi-
Castanospermine
pdb|2WC4|A Chain A, Structure Of Family 1 Beta-Glucosidase From Thermotoga
Maritima In Complex With 3-Imino-2-Thia-(+)-
Castanospermine
pdb|2WC4|B Chain B, Structure Of Family 1 Beta-Glucosidase From Thermotoga
Maritima In Complex With 3-Imino-2-Thia-(+)-
Castanospermine
pdb|2WC4|C Chain C, Structure Of Family 1 Beta-Glucosidase From Thermotoga
Maritima In Complex With 3-Imino-2-Thia-(+)-
Castanospermine
pdb|2WC4|D Chain D, Structure Of Family 1 Beta-Glucosidase From Thermotoga
Maritima In Complex With 3-Imino-2-Thia-(+)-
Castanospermine
Length = 468
Score = 358 bits (920), Expect = 3e-99, Method: Compositional matrix adjust.
Identities = 199/463 (42%), Positives = 277/463 (59%), Gaps = 32/463 (6%)
Query: 18 NVSKTDFPPNFVFGVATSAYQIEGACEEGNRGASIWDDFTHTEGKIIDKSNGDVAVDHYH 77
NV K FP F++GVAT++YQIEG+ G SIW F+HT G + + GDVA DHY+
Sbjct: 24 NVKK--FPEGFLWGVATASYQIEGSPLADGAGMSIWHTFSHTPGNVKNGDTGDVACDHYN 81
Query: 78 RYKEDIDLIAKLGFDAYRFSISWSRIFPDGLGTKINMEGITFYNNIIDALLQKGIQPYVT 137
R+KEDI++I KLG AYRFSISW RI P+G G ++N +G+ FYN IID LL+KGI P+VT
Sbjct: 82 RWKEDIEIIEKLGVKAYRFSISWPRILPEGTG-RVNQKGLDFYNRIIDTLLEKGITPFVT 140
Query: 138 LYHWDLPLHLHESMGGWLNKEIVKYFEIYADTCFASFGDRVKNWITINEPLQTAVNGYCT 197
+YHWDLP L + GGW N+EI +F Y+ F +FGDRVKNWIT+NEP A+ G+
Sbjct: 141 IYHWDLPFAL-QLKGGWANREIADWFAEYSRVLFENFGDRVKNWITLNEPWVVAIVGHLY 199
Query: 198 GIFAPGRHQHSSTEPYLVAHHQILAHAAAFSVYQRKYKDKQGGNIGLVVDCEWAEANSDK 257
G+ APG + H+ + AHA A V++ KD G IG+V + + E S+K
Sbjct: 200 GVHAPGMRDIYVA--FRAVHNLLRAHARAVKVFRETVKD---GKIGIVFNNGYFEPASEK 254
Query: 258 IEDKSAAARRLDF-QIGWYLHPIYYGDYPEVMRNNLGDQLPKFMQKDKELVRNSLDFVGL 316
ED A F +L+PIY GDYPE++ + LP+ + D ++ +DFVGL
Sbjct: 255 EEDIRAVRFMHQFNNYPLFLNPIYRGDYPELVLEFAREYLPENYKDDMSEIQEKIDFVGL 314
Query: 317 NHYTSRFIAHATKSPEEGSFYEAQEMERLVEWEGGEVIGEKAASEWLYVVPWGLRKVLNY 376
N+Y+ + +P + SF E + + WE +VP G+ +L
Sbjct: 315 NYYSGHLVKFDPDAPAKVSFVERDLPKTAMGWE---------------IVPEGIYWILKK 359
Query: 377 IAKTYNNPPIYVTENG--MDDEENDSSPLHEMLDDKLRVRYFKGYLSAVAQAIKDGADVR 434
+ + YN P +Y+TENG DD ++ +H D+ R+ Y K ++ +AI++G ++
Sbjct: 360 VKEEYNPPEVYITENGAAFDDVVSEDGRVH----DQNRIDYLKAHIGQAWKAIQEGVPLK 415
Query: 435 GYFVWSLLDNFEWAQGYTKRFGLVYVDYKNGLVRHPKSSAYWF 477
GYFVWSLLDNFEWA+GY+KRFG+VYVDY R K S YW+
Sbjct: 416 GYFVWSLLDNFEWAEGYSKRFGIVYVDYSTQK-RIVKDSGYWY 457
>pdb|3AHZ|A Chain A, Crystal Structure Of Beta-Glucosidase From Termite
Neotermes Koshunensis In Complex With Tris
pdb|3VIF|A Chain A, Crystal Structure Of Beta-Glucosidase From Termite
Neotermes Koshunensis In Complex With Gluconolactone
pdb|3VIG|A Chain A, Crystal Structure Of Beta-Glucosidase From Termite
Neotermes Koshunensis In Complex With 1-Deoxynojirimycin
pdb|3VIH|A Chain A, Crystal Structure Of Beta-Glucosidase From Termite
Neotermes Koshunensis In Complex With Glycerol
pdb|3VII|A Chain A, Crystal Structure Of Beta-Glucosidase From Termite
Neotermes Koshunensis In Complex With Bis-Tris
Length = 487
Score = 351 bits (901), Expect = 4e-97, Method: Compositional matrix adjust.
Identities = 192/471 (40%), Positives = 279/471 (59%), Gaps = 41/471 (8%)
Query: 24 FPPNFVFGVATSAYQIEGACEEGNRGASIWDDFTHTEGK-IIDKSNGDVAVDHYHRYKED 82
FP F G AT++YQIEGA +E +G +IWD TH ++D + GD+A D YH YKED
Sbjct: 12 FPDEFKLGAATASYQIEGAWDENGKGPNIWDTLTHEHPDYVVDGATGDIADDSYHLYKED 71
Query: 83 IDLIAKLGFDAYRFSISWSRIFPDGLGTKINMEGITFYNNIIDALLQKGIQPYVTLYHWD 142
+ ++ +LG YRFSISW+R+ P+G +N +GI +YNN+I+ LL GI+P VT+YHWD
Sbjct: 72 VKILKELGAQVYRFSISWARVLPEGHDNIVNQDGIDYYNNLINELLANGIEPMVTMYHWD 131
Query: 143 LPLHLHESMGGWLNKEIVKYFEIYADTCFASFGDRVKNWITINEPLQTAVNGYCTGIFAP 202
LP L + +GGW N + KY E YA F +FGDRVK W+T NEPL T ++GY + I
Sbjct: 132 LPQALQD-LGGWPNLVLAKYSENYARVLFKNFGDRVKLWLTFNEPL-TFMDGYASEIGMA 189
Query: 203 GRHQHSSTEPYLVAHHQILAHAAAFSVYQRKYKDKQGGNIGLVVDCEWAEANSDKIEDKS 262
YL AH I AHA + +Y ++++ +QGG +G+ ++ W E ++ ED++
Sbjct: 190 PSINTPGIGDYLAAHTVIHAHARIYHLYDQEFRAEQGGKVGISLNINWCEPATNSAEDRA 249
Query: 263 AAARRLDFQIGWYLHPIYY--GDYPEVMRNNLG----------DQLPKFMQKDKELVRNS 310
+ F +G Y HPI+ GDYP V+++ + +LP+F ++ E +R +
Sbjct: 250 SCENYQQFNLGLYAHPIFTEEGDYPAVLKDRVSRNSADEGYTDSRLPQFTAEEVEYIRGT 309
Query: 311 LDFVGLNHYTSRFIAHATKSPEEGSFYEAQEMERLVEWEGGEVIGEKA-----ASEWLYV 365
DF+G+N YT+ KS EG YE + G ++ + A AS WL V
Sbjct: 310 HDFLGINFYTALL----GKSGVEG--YEPSRYR-----DSGVILTQDAAWPISASSWLKV 358
Query: 366 VPWGLRKVLNYIAKTYNNPPIYVTENGMDDEENDSSPLHEMLDDKLRVRYFKGYLSAVAQ 425
VPWG RK LN+I YNNPP+++TENG D + L+D RV Y+ +L + +
Sbjct: 359 VPWGFRKELNWIKNEYNNPPVFITENGFSD--------YGGLNDTGRVHYYTEHLKEMLK 410
Query: 426 AI-KDGADVRGYFVWSLLDNFEWAQGYTKRFGLVYVDYKN-GLVRHPKSSA 474
AI +DG +V GY WSL+DNFEW +GY+++FG+ VD+++ R PK SA
Sbjct: 411 AIHEDGVNVIGYTAWSLMDNFEWLRGYSEKFGIYAVDFEDPARPRIPKESA 461
>pdb|3AI0|A Chain A, Crystal Structure Of Beta-Glucosidase From Termite
Neotermes Koshunensis In Complex With
Para-Nitrophenyl-Beta-D-Glucopyranoside
pdb|3VIM|A Chain A, Crystal Structure Of Beta-Glucosidase From Termite
Neotermes Koshunensis In Complex With A New
Glucopyranosidic Product
pdb|3VIN|A Chain A, Crystal Structure Of Beta-Glucosidase From Termite
Neotermes Koshunensis In Complex With A New
Glucopyranosidic Product
pdb|3VIO|A Chain A, Crystal Structure Of Beta-Glucosidase From Termite
Neotermes Koshunensis In Complex With A New
Glucopyranosidic Product
pdb|3VIP|A Chain A, Crystal Structure Of Beta-Glucosidase From Termite
Neotermes Koshunensis In Complex With A New
Glucopyranosidic Product
Length = 487
Score = 350 bits (898), Expect = 1e-96, Method: Compositional matrix adjust.
Identities = 191/471 (40%), Positives = 279/471 (59%), Gaps = 41/471 (8%)
Query: 24 FPPNFVFGVATSAYQIEGACEEGNRGASIWDDFTHTEGK-IIDKSNGDVAVDHYHRYKED 82
FP F G AT++YQIEGA +E +G +IWD TH ++D + GD+A D YH YKED
Sbjct: 12 FPDEFKLGAATASYQIEGAWDENGKGPNIWDTLTHEHPDYVVDGATGDIADDSYHLYKED 71
Query: 83 IDLIAKLGFDAYRFSISWSRIFPDGLGTKINMEGITFYNNIIDALLQKGIQPYVTLYHWD 142
+ ++ +LG YRFSISW+R+ P+G +N +GI +YNN+I+ LL GI+P VT+YHWD
Sbjct: 72 VKILKELGAQVYRFSISWARVLPEGHDNIVNQDGIDYYNNLINELLANGIEPMVTMYHWD 131
Query: 143 LPLHLHESMGGWLNKEIVKYFEIYADTCFASFGDRVKNWITINEPLQTAVNGYCTGIFAP 202
LP L + +GGW N + KY E YA F +FGDRVK W+T N+PL T ++GY + I
Sbjct: 132 LPQALQD-LGGWPNLVLAKYSENYARVLFKNFGDRVKLWLTFNDPL-TFMDGYASEIGMA 189
Query: 203 GRHQHSSTEPYLVAHHQILAHAAAFSVYQRKYKDKQGGNIGLVVDCEWAEANSDKIEDKS 262
YL AH I AHA + +Y ++++ +QGG +G+ ++ W E ++ ED++
Sbjct: 190 PSINTPGIGDYLAAHTVIHAHARIYHLYDQEFRAEQGGKVGISLNINWCEPATNSAEDRA 249
Query: 263 AAARRLDFQIGWYLHPIYY--GDYPEVMRNNLG----------DQLPKFMQKDKELVRNS 310
+ F +G Y HPI+ GDYP V+++ + +LP+F ++ E +R +
Sbjct: 250 SCENYQQFNLGLYAHPIFTEEGDYPAVLKDRVSRNSADEGYTDSRLPQFTAEEVEYIRGT 309
Query: 311 LDFVGLNHYTSRFIAHATKSPEEGSFYEAQEMERLVEWEGGEVIGEKA-----ASEWLYV 365
DF+G+N YT+ KS EG YE + G ++ + A AS WL V
Sbjct: 310 HDFLGINFYTALL----GKSGVEG--YEPSRYR-----DSGVILTQDAAWPISASSWLKV 358
Query: 366 VPWGLRKVLNYIAKTYNNPPIYVTENGMDDEENDSSPLHEMLDDKLRVRYFKGYLSAVAQ 425
VPWG RK LN+I YNNPP+++TENG D + L+D RV Y+ +L + +
Sbjct: 359 VPWGFRKELNWIKNEYNNPPVFITENGFSD--------YGGLNDTGRVHYYTEHLKEMLK 410
Query: 426 AI-KDGADVRGYFVWSLLDNFEWAQGYTKRFGLVYVDYKN-GLVRHPKSSA 474
AI +DG +V GY WSL+DNFEW +GY+++FG+ VD+++ R PK SA
Sbjct: 411 AIHEDGVNVIGYTAWSLMDNFEWLRGYSEKFGIYAVDFEDPARPRIPKESA 461
>pdb|3VIK|A Chain A, Crystal Structure Of Beta-Glucosidase From Termite
Neotermes Koshunensis In Complex With Cellobiose
pdb|3VIL|A Chain A, Crystal Structure Of Beta-Glucosidase From Termite
Neotermes Koshunensis In Complex With Salicin
Length = 487
Score = 349 bits (896), Expect = 2e-96, Method: Compositional matrix adjust.
Identities = 191/471 (40%), Positives = 278/471 (59%), Gaps = 41/471 (8%)
Query: 24 FPPNFVFGVATSAYQIEGACEEGNRGASIWDDFTHTEGK-IIDKSNGDVAVDHYHRYKED 82
FP F G AT++YQIEGA +E +G +IWD TH ++D + GD+A D YH YKED
Sbjct: 12 FPDEFKLGAATASYQIEGAWDENGKGPNIWDTLTHEHPDYVVDGATGDIADDSYHLYKED 71
Query: 83 IDLIAKLGFDAYRFSISWSRIFPDGLGTKINMEGITFYNNIIDALLQKGIQPYVTLYHWD 142
+ ++ +LG YRFSISW+R+ P+G +N +GI +YNN+I+ LL GI+P VT+YHWD
Sbjct: 72 VKILKELGAQVYRFSISWARVLPEGHDNIVNQDGIDYYNNLINELLANGIEPMVTMYHWD 131
Query: 143 LPLHLHESMGGWLNKEIVKYFEIYADTCFASFGDRVKNWITINEPLQTAVNGYCTGIFAP 202
LP L + +GGW N + KY E YA F +FGDRVK W+T N PL T ++GY + I
Sbjct: 132 LPQALQD-LGGWPNLVLAKYSENYARVLFKNFGDRVKLWLTFNSPL-TFMDGYASEIGMA 189
Query: 203 GRHQHSSTEPYLVAHHQILAHAAAFSVYQRKYKDKQGGNIGLVVDCEWAEANSDKIEDKS 262
YL AH I AHA + +Y ++++ +QGG +G+ ++ W E ++ ED++
Sbjct: 190 PSINTPGIGDYLAAHTVIHAHARIYHLYDQEFRAEQGGKVGISLNINWCEPATNSAEDRA 249
Query: 263 AAARRLDFQIGWYLHPIYY--GDYPEVMRNNLG----------DQLPKFMQKDKELVRNS 310
+ F +G Y HPI+ GDYP V+++ + +LP+F ++ E +R +
Sbjct: 250 SCENYQQFNLGLYAHPIFTEEGDYPAVLKDRVSRNSADEGYTDSRLPQFTAEEVEYIRGT 309
Query: 311 LDFVGLNHYTSRFIAHATKSPEEGSFYEAQEMERLVEWEGGEVIGEKA-----ASEWLYV 365
DF+G+N YT+ KS EG YE + G ++ + A AS WL V
Sbjct: 310 HDFLGINFYTALL----GKSGVEG--YEPSRYR-----DSGVILTQDAAWPISASSWLKV 358
Query: 366 VPWGLRKVLNYIAKTYNNPPIYVTENGMDDEENDSSPLHEMLDDKLRVRYFKGYLSAVAQ 425
VPWG RK LN+I YNNPP+++TENG D + L+D RV Y+ +L + +
Sbjct: 359 VPWGFRKELNWIKNEYNNPPVFITENGFSD--------YGGLNDTGRVHYYTEHLKEMLK 410
Query: 426 AI-KDGADVRGYFVWSLLDNFEWAQGYTKRFGLVYVDYKN-GLVRHPKSSA 474
AI +DG +V GY WSL+DNFEW +GY+++FG+ VD+++ R PK SA
Sbjct: 411 AIHEDGVNVIGYTAWSLMDNFEWLRGYSEKFGIYAVDFEDPARPRIPKESA 461
>pdb|3VIJ|A Chain A, Crystal Structure Of Beta-Glucosidase From Termite
Neotermes Koshunensis In Complex With Glucose
Length = 487
Score = 349 bits (896), Expect = 2e-96, Method: Compositional matrix adjust.
Identities = 191/471 (40%), Positives = 278/471 (59%), Gaps = 41/471 (8%)
Query: 24 FPPNFVFGVATSAYQIEGACEEGNRGASIWDDFTHTEGK-IIDKSNGDVAVDHYHRYKED 82
FP F G AT++YQIEGA +E +G +IWD TH ++D + GD+A D YH YKED
Sbjct: 12 FPDEFKLGAATASYQIEGAWDENGKGPNIWDTLTHEHPDYVVDGATGDIADDSYHLYKED 71
Query: 83 IDLIAKLGFDAYRFSISWSRIFPDGLGTKINMEGITFYNNIIDALLQKGIQPYVTLYHWD 142
+ ++ +LG YRFSISW+R+ P+G +N +GI +YNN+I+ LL GI+P VT+YHWD
Sbjct: 72 VKILKELGAQVYRFSISWARVLPEGHDNIVNQDGIDYYNNLINELLANGIEPMVTMYHWD 131
Query: 143 LPLHLHESMGGWLNKEIVKYFEIYADTCFASFGDRVKNWITINEPLQTAVNGYCTGIFAP 202
LP L + +GGW N + KY E YA F +FGDRVK W+T N PL T ++GY + I
Sbjct: 132 LPQALQD-LGGWPNLVLAKYSENYARVLFKNFGDRVKLWLTFNAPL-TFMDGYASEIGMA 189
Query: 203 GRHQHSSTEPYLVAHHQILAHAAAFSVYQRKYKDKQGGNIGLVVDCEWAEANSDKIEDKS 262
YL AH I AHA + +Y ++++ +QGG +G+ ++ W E ++ ED++
Sbjct: 190 PSINTPGIGDYLAAHTVIHAHARIYHLYDQEFRAEQGGKVGISLNINWCEPATNSAEDRA 249
Query: 263 AAARRLDFQIGWYLHPIYY--GDYPEVMRNNLG----------DQLPKFMQKDKELVRNS 310
+ F +G Y HPI+ GDYP V+++ + +LP+F ++ E +R +
Sbjct: 250 SCENYQQFNLGLYAHPIFTEEGDYPAVLKDRVSRNSADEGYTDSRLPQFTAEEVEYIRGT 309
Query: 311 LDFVGLNHYTSRFIAHATKSPEEGSFYEAQEMERLVEWEGGEVIGEKA-----ASEWLYV 365
DF+G+N YT+ KS EG YE + G ++ + A AS WL V
Sbjct: 310 HDFLGINFYTALL----GKSGVEG--YEPSRYR-----DSGVILTQDAAWPISASSWLKV 358
Query: 366 VPWGLRKVLNYIAKTYNNPPIYVTENGMDDEENDSSPLHEMLDDKLRVRYFKGYLSAVAQ 425
VPWG RK LN+I YNNPP+++TENG D + L+D RV Y+ +L + +
Sbjct: 359 VPWGFRKELNWIKNEYNNPPVFITENGFSD--------YGGLNDTGRVHYYTEHLKEMLK 410
Query: 426 AI-KDGADVRGYFVWSLLDNFEWAQGYTKRFGLVYVDYKN-GLVRHPKSSA 474
AI +DG +V GY WSL+DNFEW +GY+++FG+ VD+++ R PK SA
Sbjct: 411 AIHEDGVNVIGYTAWSLMDNFEWLRGYSEKFGIYAVDFEDPARPRIPKESA 461
>pdb|2E9L|A Chain A, Crystal Structure Of Human Cytosolic Neutral
Beta-Glycosylceramidase (Klotho-Related Prote:klrp)
Complex With Glucose And Fatty Acids
pdb|2E9M|A Chain A, Crystal Structure Of Human Cytosolic Neutral Beta-
Glycosylceramidase (Klotho-Related Prote:klrp) Complex
With Galactose And Fatty Acids
Length = 469
Score = 343 bits (879), Expect = 2e-94, Method: Compositional matrix adjust.
Identities = 189/466 (40%), Positives = 274/466 (58%), Gaps = 30/466 (6%)
Query: 24 FPPNFVFGVATSAYQIEGACEEGNRGASIWDDFTHTEG-KIIDKSNGDVAVDHYHRYKED 82
FP F + AT+AYQ+EG + +G +WD FTH G ++ GDVA Y ++ED
Sbjct: 3 FPAGFGWAAATAAYQVEGGWDADGKGPCVWDTFTHQGGERVFKNQTGDVACGSYTLWEED 62
Query: 83 IDLIAKLGFDAYRFSISWSRIFPDGLGTKINMEGITFYNNIIDALLQKGIQPYVTLYHWD 142
+ I +LG YRFS+SWSR+ PDG IN +GI +YN IID LL+ G+ P VTLYH+D
Sbjct: 63 LKCIKQLGLTHYRFSLSWSRLLPDGTTGFINQKGIDYYNKIIDDLLKNGVTPIVTLYHFD 122
Query: 143 LPLHLHESMGGWLNKEIVKYFEIYADTCFASFGDRVKNWITINEPLQTAVNGYCTGIFAP 202
LP L E GGWL++ I++ F+ YA CF++FGDRVK WITINE +V Y G+F P
Sbjct: 123 LPQTL-EDQGGWLSEAIIESFDKYAQFCFSTFGDRVKQWITINEANVLSVMSYDLGMFPP 181
Query: 203 GRHQHSSTEPYLVAHHQILAHAAAFSVYQRKYKDKQGGNIGLVVDCEWAE-ANSDKIEDK 261
G H T Y AH+ I AHA ++ Y ++ KQ G + L + W E A+ + + D+
Sbjct: 182 GI-PHFGTGGYQAAHNLIKAHARSWHSYDSLFRKKQKGMVSLSLFAVWLEPADPNSVSDQ 240
Query: 262 SAAARRLDFQIGWYLHPIYY-GDYPEVMRNNLG----------DQLPKFMQKDKELVRNS 310
AA R + F + + PI+ GDYPEV+++ + +LP+F +++K++++ +
Sbjct: 241 EAAKRAITFHLDLFAKPIFIDGDYPEVVKSQIASMSQKQGYPSSRLPEFTEEEKKMIKGT 300
Query: 311 LDFVGLNHYTSRFIAHATKSPEEGSFYEAQEMERLVEWEGGEVIGEKAASEWLYVVPWGL 370
DF + +YT+R I + E + E+E + V +W+YVVPWG+
Sbjct: 301 ADFFAVQYYTTRLIKYQENKKGELGILQDAEIEFFPDPSWKNV-------DWIYVVPWGV 353
Query: 371 RKVLNYIAKTYNNPPIYVTENGMDDEENDSSPLHEMLDDKLRVRYFKGYLSAVAQAIK-D 429
K+L YI TYNNP IY+TENG ++D +P LDD R YF+ + +AI+ D
Sbjct: 354 CKLLKYIKDTYNNPVIYITENGF--PQSDPAP----LDDTQRWEYFRQTFQELFKAIQLD 407
Query: 430 GADVRGYFVWSLLDNFEWAQGYTKRFGLVYVDYKN-GLVRHPKSSA 474
+++ Y WSLLDNFEW QGY+ RFGL +VD+++ R P +SA
Sbjct: 408 KVNLQVYCAWSLLDNFEWNQGYSSRFGLFHVDFEDPARPRVPYTSA 453
>pdb|2JFE|X Chain X, The Crystal Structure Of Human Cytosolic Beta-Glucosidase
Length = 469
Score = 342 bits (877), Expect = 2e-94, Method: Compositional matrix adjust.
Identities = 189/466 (40%), Positives = 274/466 (58%), Gaps = 30/466 (6%)
Query: 24 FPPNFVFGVATSAYQIEGACEEGNRGASIWDDFTHTEG-KIIDKSNGDVAVDHYHRYKED 82
FP F + AT+AYQ+EG + +G +WD FTH G ++ GDVA Y ++ED
Sbjct: 3 FPAGFGWAAATAAYQVEGGWDADGKGPCVWDTFTHQGGERVFKNQTGDVACGSYTLWEED 62
Query: 83 IDLIAKLGFDAYRFSISWSRIFPDGLGTKINMEGITFYNNIIDALLQKGIQPYVTLYHWD 142
+ I +LG YRFS+SWSR+ PDG IN +GI +YN IID LL+ G+ P VTLYH+D
Sbjct: 63 LKCIKQLGLTHYRFSLSWSRLLPDGTTGFINQKGIDYYNKIIDDLLKNGVTPIVTLYHFD 122
Query: 143 LPLHLHESMGGWLNKEIVKYFEIYADTCFASFGDRVKNWITINEPLQTAVNGYCTGIFAP 202
LP L E GGWL++ I++ F+ YA CF++FGDRVK WITINE +V Y G+F P
Sbjct: 123 LPQTL-EDQGGWLSEAIIESFDKYAQFCFSTFGDRVKQWITINEANVLSVMSYDLGMFPP 181
Query: 203 GRHQHSSTEPYLVAHHQILAHAAAFSVYQRKYKDKQGGNIGLVVDCEWAE-ANSDKIEDK 261
G H T Y AH+ I AHA ++ Y ++ KQ G + L + W E A+ + + D+
Sbjct: 182 GI-PHFGTGGYQAAHNLIKAHARSWHSYDSLFRKKQKGMVSLSLFAVWLEPADPNSVSDQ 240
Query: 262 SAAARRLDFQIGWYLHPIYY-GDYPEVMRNNLG----------DQLPKFMQKDKELVRNS 310
AA R + F + + PI+ GDYPEV+++ + +LP+F +++K++++ +
Sbjct: 241 EAAKRAITFHLDLFAKPIFIDGDYPEVVKSQIASMSQKQGYPSSRLPEFTEEEKKMIKGT 300
Query: 311 LDFVGLNHYTSRFIAHATKSPEEGSFYEAQEMERLVEWEGGEVIGEKAASEWLYVVPWGL 370
DF + +YT+R I + E + E+E + V +W+YVVPWG+
Sbjct: 301 ADFFAVQYYTTRLIKYQENKKGELGILQDAEIEFFPDPSWINV-------DWIYVVPWGV 353
Query: 371 RKVLNYIAKTYNNPPIYVTENGMDDEENDSSPLHEMLDDKLRVRYFKGYLSAVAQAIK-D 429
K+L YI TYNNP IY+TENG ++D +P LDD R YF+ + +AI+ D
Sbjct: 354 CKLLKYIKDTYNNPVIYITENGF--PQSDPAP----LDDTQRWEYFRQTFQELFKAIQLD 407
Query: 430 GADVRGYFVWSLLDNFEWAQGYTKRFGLVYVDYKN-GLVRHPKSSA 474
+++ Y WSLLDNFEW QGY+ RFGL +VD+++ R P +SA
Sbjct: 408 KVNLQVYCAWSLLDNFEWNQGYSSRFGLFHVDFEDPARPRVPYTSA 453
>pdb|2ZOX|A Chain A, Crystal Structure Of The Covalent Intermediate Of Human
Cytosolic Beta-Glucosidase
pdb|3VKK|A Chain A, Crystal Structure Of The Covalent Intermediate Of Human
Cytosolic Beta-Glucosidase-Mannose Complex
Length = 469
Score = 342 bits (876), Expect = 3e-94, Method: Compositional matrix adjust.
Identities = 188/466 (40%), Positives = 274/466 (58%), Gaps = 30/466 (6%)
Query: 24 FPPNFVFGVATSAYQIEGACEEGNRGASIWDDFTHTEG-KIIDKSNGDVAVDHYHRYKED 82
FP F + AT+AYQ+EG + +G +WD FTH G ++ GDVA Y ++ED
Sbjct: 3 FPAGFGWAAATAAYQVEGGWDADGKGPCVWDTFTHQGGERVFKNQTGDVACGSYTLWEED 62
Query: 83 IDLIAKLGFDAYRFSISWSRIFPDGLGTKINMEGITFYNNIIDALLQKGIQPYVTLYHWD 142
+ I +LG YRFS+SWSR+ PDG IN +GI +YN IID LL+ G+ P VTLYH+D
Sbjct: 63 LKCIKQLGLTHYRFSLSWSRLLPDGTTGFINQKGIDYYNKIIDDLLKNGVTPIVTLYHFD 122
Query: 143 LPLHLHESMGGWLNKEIVKYFEIYADTCFASFGDRVKNWITINEPLQTAVNGYCTGIFAP 202
LP L E GGWL++ I++ F+ YA CF++FGDRVK WITIN+ +V Y G+F P
Sbjct: 123 LPQTL-EDQGGWLSEAIIESFDKYAQFCFSTFGDRVKQWITINQANVLSVMSYDLGMFPP 181
Query: 203 GRHQHSSTEPYLVAHHQILAHAAAFSVYQRKYKDKQGGNIGLVVDCEWAE-ANSDKIEDK 261
G H T Y AH+ I AHA ++ Y ++ KQ G + L + W E A+ + + D+
Sbjct: 182 GI-PHFGTGGYQAAHNLIKAHARSWHSYDSLFRKKQKGMVSLSLFAVWLEPADPNSVSDQ 240
Query: 262 SAAARRLDFQIGWYLHPIYY-GDYPEVMRNNLG----------DQLPKFMQKDKELVRNS 310
AA R + F + + PI+ GDYPEV+++ + +LP+F +++K++++ +
Sbjct: 241 EAAKRAITFHLDLFAKPIFIDGDYPEVVKSQIASMSQKQGYPSSRLPEFTEEEKKMIKGT 300
Query: 311 LDFVGLNHYTSRFIAHATKSPEEGSFYEAQEMERLVEWEGGEVIGEKAASEWLYVVPWGL 370
DF + +YT+R I + E + E+E + V +W+YVVPWG+
Sbjct: 301 ADFFAVQYYTTRLIKYQENKKGELGILQDAEIEFFPDPSWKNV-------DWIYVVPWGV 353
Query: 371 RKVLNYIAKTYNNPPIYVTENGMDDEENDSSPLHEMLDDKLRVRYFKGYLSAVAQAIK-D 429
K+L YI TYNNP IY+TENG ++D +P LDD R YF+ + +AI+ D
Sbjct: 354 CKLLKYIKDTYNNPVIYITENGF--PQSDPAP----LDDTQRWEYFRQTFQELFKAIQLD 407
Query: 430 GADVRGYFVWSLLDNFEWAQGYTKRFGLVYVDYKN-GLVRHPKSSA 474
+++ Y WSLLDNFEW QGY+ RFGL +VD+++ R P +SA
Sbjct: 408 KVNLQVYCAWSLLDNFEWNQGYSSRFGLFHVDFEDPARPRVPYTSA 453
>pdb|3TA9|A Chain A, Beta-Glucosidase A From The Halothermophile H. Orenii
pdb|3TA9|B Chain B, Beta-Glucosidase A From The Halothermophile H. Orenii
Length = 458
Score = 335 bits (858), Expect = 4e-92, Method: Compositional matrix adjust.
Identities = 184/464 (39%), Positives = 267/464 (57%), Gaps = 30/464 (6%)
Query: 19 VSKTDFPPNFVFGVATSAYQIEGACEEGNRGASIWDDFTHTEGKIIDKSNGDVAVDHYHR 78
++K FP +F++G ATS+YQIEGA E +G SIWD F+HT GKI + GD+A DHYH
Sbjct: 8 MAKIIFPEDFIWGAATSSYQIEGAFNEDGKGESIWDRFSHTPGKIENGDTGDIACDHYHL 67
Query: 79 YKEDIDLIAKLGFDAYRFSISWSRIFPDGLGTKINMEGITFYNNIIDALLQKGIQPYVTL 138
Y+EDI+L+ ++G +YRFS SW RI P+G G ++N +G+ FY ++D LL+ I+P +TL
Sbjct: 68 YREDIELMKEIGIRSYRFSTSWPRILPEGKG-RVNQKGLDFYKRLVDNLLKANIRPMITL 126
Query: 139 YHWDLPLHLHESMGGWLNKEIVKYFEIYADTCFASFGDRVKNWITINEPLQTAVNGYCTG 198
YHWDLP L + GGW N++ KYF YA F F V W+T NEP A G+ G
Sbjct: 127 YHWDLPQALQDK-GGWTNRDTAKYFAEYARLMFEEFNGLVDLWVTHNEPWVVAFEGHAFG 185
Query: 199 IFAPGRHQHSSTEPYLVAHHQILAHAAAFSVYQRKYKDKQGGNIGLVVDCEWAEANSDKI 258
APG + VAHH +L+H A +++ ++ G IG+ ++ A D
Sbjct: 186 NHAPGTKDFKTA--LQVAHHLLLSHGMAVDIFR---EEDLPGEIGITLNLTPAYPAGDSE 240
Query: 259 EDKSAAARRLDFQIGWYLHPIYYGDYPEVMRNNLGDQLPKFMQK--DKELVRNSLDFVGL 316
+D AA+ D+ W+L P++ G YPE + + L F + D +++ +DF+G+
Sbjct: 241 KDVKAASLLDDYINAWFLSPVFKGSYPEELHHIYEQNLGAFTTQPGDMDIISRDIDFLGI 300
Query: 317 NHYTSRFIAHATKSPEEGSF-YEAQEMERLVEWEGGEVIGEKAASEWLYVVPWGLRKVLN 375
N+Y+ + H P + F E +ME E G W + P GL +L
Sbjct: 301 NYYSRMVVRH---KPGDNLFNAEVVKMEDRPSTEMG----------W-EIYPQGLYDILV 346
Query: 376 YIAKTYNNPPIYVTENG--MDDEENDSSPLHEMLDDKLRVRYFKGYLSAVAQAIKDGADV 433
+ K Y + P+Y+TENG DD+ + +H D+ R+ Y + +A+KDG +
Sbjct: 347 RVNKEYTDKPLYITENGAAFDDKLTEEGKIH----DEKRINYLGDHFKQAYKALKDGVPL 402
Query: 434 RGYFVWSLLDNFEWAQGYTKRFGLVYVDYKNGLVRHPKSSAYWF 477
RGY+VWSL+DNFEWA GY+KRFGL+YVDY+NG R K SA W+
Sbjct: 403 RGYYVWSLMDNFEWAYGYSKRFGLIYVDYENGNRRFLKDSALWY 446
>pdb|1WCG|A Chain A, Aphid Myrosinase
pdb|1WCG|B Chain B, Aphid Myrosinase
Length = 464
Score = 328 bits (840), Expect = 5e-90, Method: Compositional matrix adjust.
Identities = 179/469 (38%), Positives = 267/469 (56%), Gaps = 30/469 (6%)
Query: 24 FPPNFVFGVATSAYQIEGACEEGNRGASIWDDFTHTEGKII-DKSNGDVAVDHYHRYKED 82
FP +F+FG +T++YQIEG E +G +IWD HT ++I D +NGD+A D YH+YKED
Sbjct: 5 FPKDFMFGTSTASYQIEGGWNEDGKGENIWDRLVHTSPEVIKDGTNGDIACDSYHKYKED 64
Query: 83 IDLIAKLGFDAYRFSISWSRIFPDGLGTKINMEGITFYNNIIDALLQKGIQPYVTLYHWD 142
+ +I L YRFSISW+RI P G+ + +GI +YNN+I+ L++ I P VT+YHWD
Sbjct: 65 VAIIKDLNLKFYRFSISWARIAPSGVMNSLEPKGIAYYNNLINELIKNDIIPLVTMYHWD 124
Query: 143 LPLHLHESMGGWLNKEIVKYFEIYADTCFASFGDRVKNWITINEPLQTAVNGYCTGIFAP 202
LP +L + +GGW+N + YF+ YA F FGDRVK WIT NEP+ GY +AP
Sbjct: 125 LPQYLQD-LGGWVNPIMSDYFKEYARVLFTYFGDRVKWWITFNEPI-AVCKGYSIKAYAP 182
Query: 203 GRHQHSSTEPYLVAHHQILAHAAAFSVYQRKYKDKQGGNIGLVVD-CEWAEANSDKIEDK 261
+ +T YL H Q++AH A+ +Y+ +K Q G I + + + N++ +D
Sbjct: 183 NLNL-KTTGHYLAGHTQLIAHGKAYRLYEEMFKPTQNGKISISISGVFFMPKNAESDDDI 241
Query: 262 SAAARRLDFQIGWYLHPIYYGDYPEVMRNNLG----------DQLPKFMQKDKELVRNSL 311
A R F+ GW+ HP+Y GDYP +M+ + +LPKF + + +L++ +
Sbjct: 242 ETAERANQFERGWFGHPVYKGDYPPIMKKWVDQKSKEEGLPWSKLPKFTKDEIKLLKGTA 301
Query: 312 DFVGLNHYTSRFIAHATKSPEEGSFYEAQEMERLVEWEGGEVIGEKAASEWLYVVPWGLR 371
DF LNHY+SR + + P +A + + E + + ++ VP GLR
Sbjct: 302 DFYALNHYSSRLVTFGS-DPNPNFNPDASYVTSV-----DEAWLKPNETPYIIPVPEGLR 355
Query: 372 KVLNYIAKTYNNPPIYVTENGMDDEENDSSPLHEMLDDKLRVRYFKGYLSAVAQAI-KDG 430
K+L ++ Y NP + +TENG D+ LDD ++ Y K YL+A QA+ +D
Sbjct: 356 KLLIWLKNEYGNPQLLITENGYGDD--------GQLDDFEKISYLKNYLNATLQAMYEDK 407
Query: 431 ADVRGYFVWSLLDNFEWAQGYTKRFGLVYVDYKNGLVRHPKSSAYWFMR 479
+V GY VWSLLDNFEW GY+ FGLV +D+ + K +Y + +
Sbjct: 408 CNVIGYTVWSLLDNFEWFYGYSIHFGLVKIDFNDPQRTRTKRESYTYFK 456
>pdb|1MYR|A Chain A, Myrosinase From Sinapis Alba
Length = 501
Score = 328 bits (840), Expect = 5e-90, Method: Compositional matrix adjust.
Identities = 184/493 (37%), Positives = 280/493 (56%), Gaps = 43/493 (8%)
Query: 19 VSKTDFPPNFVFGVATSAYQIEGACEEGNRGASIWDDFTH--TEGKIIDKSNGDVAVDHY 76
++ + F +F+FGVA+SAYQIEG RG +IWD FTH + D NGD D +
Sbjct: 20 LNSSSFEADFIFGVASSAYQIEGTI---GRGLNIWDGFTHRYPDKSGPDHGNGDTTCDSF 76
Query: 77 HRYKEDIDLIAKLGFDAYRFSISWSRIFPDGLGTK-INMEGITFYNNIIDALLQKGIQPY 135
+++DID++ +L YRFSI+WSRI P G ++ +N +GI +Y+ +ID L++KGI P+
Sbjct: 77 SYWQKDIDVLDELNATGYRFSIAWSRIIPRGKRSRGVNQKGIDYYHGLIDGLIKKGITPF 136
Query: 136 VTLYHWDLPLHLHESMGGWLNKEIVKYFEIYADTCFASFGDRVKNWITINEPLQTAVNGY 195
VTL+HWDLP L + G+L+ +I+ F+ YAD CF FGD VK W+TIN+ GY
Sbjct: 137 VTLFHWDLPQTLQDEYEGFLDPQIIDDFKDYADLCFEEFGDSVKYWLTINQLYSVPTRGY 196
Query: 196 CTGIFAPGRHQ----------HSSTEPYLVAHHQILAHAAAFSVYQRKYKDKQGGNIGLV 245
+ + APGR +SSTEPY+VAHHQ+LAHA +Y++ Y QGG IG
Sbjct: 197 GSALDAPGRCSPTVDPSCYAGNSSTEPYIVAHHQLLAHAKVVDLYRKNYT-HQGGKIGPT 255
Query: 246 VDCEWAEANSDKIEDKSAAARRL-DFQIGWYLHPIYYGDYPEVMRNNLGDQLPKFMQKDK 304
+ W +D AA R+ F +GW++ P+ G YP++M + +G +LP F ++
Sbjct: 256 MITRWFLPYNDTDRHSIAATERMKQFFLGWFMGPLTNGTYPQIMIDTVGARLPTFSPEET 315
Query: 305 ELVRNSLDFVGLNHYTSRFIAHATKSPEEGSFYEAQE---------------MERLVEWE 349
LV+ S DF+GLN+Y +++ A + +P + + A + L E +
Sbjct: 316 NLVKGSYDFLGLNYYFTQY-AQPSPNPVNATNHTAMMDAGAKLTYINASGHYIGPLFESD 374
Query: 350 GGEVIGEKAASEWLYVVPWGLRKVLNYIAKTYNNPPIYVTENGMDDEENDSSPLHEMLDD 409
GG+ S +Y P G+ V++Y Y NP IYVTENG+ +++ E + D
Sbjct: 375 GGD------GSSNIYYYPKGIYSVMDYFKNKYYNPLIYVTENGISTPGSENR--KESMLD 426
Query: 410 KLRVRYFKGYLSAVAQAIKD-GADVRGYFVWSLLDNFEWAQGYTKRFGLVYVDYKNGLVR 468
R+ Y +L + + IK+ +V+GY W+L DN+E+ G+T RFGL Y+++ N R
Sbjct: 427 YTRIDYLCSHLCFLNKVIKEKDVNVKGYLAWALGDNYEFNNGFTVRFGLSYINWNNVTDR 486
Query: 469 HPKSSAYWFMRFL 481
K S W+ +F+
Sbjct: 487 DLKKSGQWYQKFI 499
>pdb|1QOX|A Chain A, Beta-Glucosidase From Bacillus Circulans Sp. Alkalophilus
pdb|1QOX|B Chain B, Beta-Glucosidase From Bacillus Circulans Sp. Alkalophilus
pdb|1QOX|C Chain C, Beta-Glucosidase From Bacillus Circulans Sp. Alkalophilus
pdb|1QOX|D Chain D, Beta-Glucosidase From Bacillus Circulans Sp. Alkalophilus
pdb|1QOX|E Chain E, Beta-Glucosidase From Bacillus Circulans Sp. Alkalophilus
pdb|1QOX|F Chain F, Beta-Glucosidase From Bacillus Circulans Sp. Alkalophilus
pdb|1QOX|G Chain G, Beta-Glucosidase From Bacillus Circulans Sp. Alkalophilus
pdb|1QOX|H Chain H, Beta-Glucosidase From Bacillus Circulans Sp. Alkalophilus
pdb|1QOX|I Chain I, Beta-Glucosidase From Bacillus Circulans Sp. Alkalophilus
pdb|1QOX|J Chain J, Beta-Glucosidase From Bacillus Circulans Sp. Alkalophilus
pdb|1QOX|K Chain K, Beta-Glucosidase From Bacillus Circulans Sp. Alkalophilus
pdb|1QOX|L Chain L, Beta-Glucosidase From Bacillus Circulans Sp. Alkalophilus
pdb|1QOX|M Chain M, Beta-Glucosidase From Bacillus Circulans Sp. Alkalophilus
pdb|1QOX|N Chain N, Beta-Glucosidase From Bacillus Circulans Sp. Alkalophilus
pdb|1QOX|O Chain O, Beta-Glucosidase From Bacillus Circulans Sp. Alkalophilus
pdb|1QOX|P Chain P, Beta-Glucosidase From Bacillus Circulans Sp. Alkalophilus
Length = 449
Score = 326 bits (836), Expect = 2e-89, Method: Compositional matrix adjust.
Identities = 185/457 (40%), Positives = 255/457 (55%), Gaps = 26/457 (5%)
Query: 24 FPPNFVFGVATSAYQIEGACEEGNRGASIWDDFTHTEGKIIDKSNGDVAVDHYHRYKEDI 83
FP +F +GVAT+AYQIEGA E RG SIWD F HT GK+ + NG+VA D YHR +ED+
Sbjct: 5 FPSDFKWGVATAAYQIEGAYNEDGRGMSIWDTFAHTPGKVKNGDNGNVACDSYHRVEEDV 64
Query: 84 DLIAKLGFDAYRFSISWSRIFPDGLGTKINMEGITFYNNIIDALLQKGIQPYVTLYHWDL 143
L+ LG YRFSISW R+ P G G ++N G+ +Y+ ++D LL GI+P+ TLYHWDL
Sbjct: 65 QLLKDLGVKVYRFSISWPRVLPQGTG-EVNRAGLDYYHRLVDELLANGIEPFCTLYHWDL 123
Query: 144 PLHLHESMGGWLNKEIVKYFEIYADTCFASFGDRVKNWITINEPLQTAVNGYCTGIFAPG 203
P L + GGW ++ + F YA+ F G ++K WIT NEP A G+ APG
Sbjct: 124 PQALQDQ-GGWGSRITIDAFAEYAELMFKELGGKIKQWITFNEPWCMAFLSNYLGVHAPG 182
Query: 204 RHQHSSTEPYLVAHHQILAHAAAFSVYQRKYKDKQGGNIGLVVDCEWAEANSDKIEDKSA 263
V+HH ++AH A ++++ G IG+ + WA ED A
Sbjct: 183 NKDLQLAID--VSHHLLVAHGRAVTLFREL---GISGEIGIAPNTSWAVPYRRTKEDMEA 237
Query: 264 AARRLDFQIGWYLHPIYYGDYPEVMRN---NLGDQLPKFMQKDKELVRNSLDFVGLNHYT 320
R + WYL PIY+G+YP+ M + NLG + P + D EL+ +DF+G+N+YT
Sbjct: 238 CLRVNGWSGDWYLDPIYFGEYPKFMLDWYENLGYK-PPIVDGDMELIHQPIDFIGINYYT 296
Query: 321 SRFIAHATKSPEEGSFYEAQEMERLVEWEGGEVIGEKAASEWLYVVPWGLRKVLNYIAKT 380
S + Y E ++ E + K W + GL +L Y A
Sbjct: 297 SSM-----------NRYNPGEAGGMLSSEAISMGAPKTDIGW-EIYAEGLYDLLRYTADK 344
Query: 381 YNNPPIYVTENGMDDEENDSSPLHEMLDDKLRVRYFKGYLSAVAQAIKDGADVRGYFVWS 440
Y NP +Y+TENG ND L + D+ R+ Y +L ++AI+DG +++GY WS
Sbjct: 345 YGNPTLYITENGA--CYNDGLSLDGRIHDQRRIDYLAMHLIQASRAIEDGINLKGYMEWS 402
Query: 441 LLDNFEWAQGYTKRFGLVYVDYKNGLVRHPKSSAYWF 477
L+DNFEWA+GY RFGLV+VDY LVR PK S YW+
Sbjct: 403 LMDNFEWAEGYGMRFGLVHVDYDT-LVRTPKDSFYWY 438
>pdb|3AHX|A Chain A, Crystal Structure Of Beta-Glucosidase A From Bacterium
Clostridium Cellulovorans
pdb|3AHX|B Chain B, Crystal Structure Of Beta-Glucosidase A From Bacterium
Clostridium Cellulovorans
pdb|3AHX|C Chain C, Crystal Structure Of Beta-Glucosidase A From Bacterium
Clostridium Cellulovorans
pdb|3AHX|D Chain D, Crystal Structure Of Beta-Glucosidase A From Bacterium
Clostridium Cellulovorans
Length = 453
Score = 325 bits (834), Expect = 3e-89, Method: Compositional matrix adjust.
Identities = 184/468 (39%), Positives = 263/468 (56%), Gaps = 33/468 (7%)
Query: 19 VSKTDFPPNFVFGVATSAYQIEGACEEGNRGASIWDDFTHTEGKIIDKSNGDVAVDHYHR 78
+ K FP +F+FG AT+AYQIEGA +E +G SIWD F+H G + NGD+A DHYHR
Sbjct: 1 MEKLRFPKDFIFGTATAAYQIEGAYKEDEKGESIWDRFSHIPGNVAKMHNGDIACDHYHR 60
Query: 79 YKEDIDLIAKLGFDAYRFSISWSRIFPDGLGTKINMEGITFYNNIIDALLQKGIQPYVTL 138
YKED+ L+ LG +YRFSI+W RIFP G G +IN +GI FY ++ID L++ I+P +T+
Sbjct: 61 YKEDVQLLKSLGIKSYRFSIAWPRIFPKGFG-EINQKGIQFYRDLIDELIKNDIEPAITI 119
Query: 139 YHWDLPLHLHESMGGWLNKEIVKYFEIYADTCFASFGDRVKNWITINEPLQTAVNGYCTG 198
YHWDLP L + +GGW N ++ Y+ YA+ F FGDRVK WIT NEP + GY G
Sbjct: 120 YHWDLPQKLQD-IGGWANPQVADYYVDYANLLFREFGDRVKTWITHNEPWVASYLGYALG 178
Query: 199 IFAPGRHQHSSTEPYLVAHHQILAHAAAFSVYQRKYKDKQGGNIGLVVDCEWAEANSDKI 258
+ APG L AH+ +L+H A Y+ +Q G IG+ ++ +NS
Sbjct: 179 VHAPGIKDMKMA--LLAAHNILLSHFKAVKAYREL---EQDGQIGITLNLSTCYSNSADE 233
Query: 259 EDKSAAARRLDFQIGWYLHPIYYGDYPEVM-----RNNLGDQLPKFMQKDKELVRNSLDF 313
ED +AA R + W+L G YPE M N+ +LPK + + V + DF
Sbjct: 234 EDIAAAHRSDGWNNRWFLDAALKGTYPEDMIKIFSDTNIMPELPKELFTE---VFETSDF 290
Query: 314 VGLNHYTSRFIAHATKSPEEGSFYEAQEMERLVEWEGGEVIGEKAASEWLYVVPWGLRKV 373
+G+N+YT + + + + E + E + K W + P GL +
Sbjct: 291 LGINYYTRQVVKNNS--------------EAFIGAESVAMDNPKTEMGW-EIYPQGLYDL 335
Query: 374 LNYIAKTYNNPPIYVTENGMDDEENDSSPLHEMLDDKLRVRYFKGYLSAVAQAIKDGADV 433
L I + Y N +Y+TENG ND ++D+ R+ Y + +A AI+ G +
Sbjct: 336 LTRIHRDYGNIDLYITENGA--AFNDMVNRDGKVEDENRLDYLYTHFAAALSAIEAGVPL 393
Query: 434 RGYFVWSLLDNFEWAQGYTKRFGLVYVDYKNGLVRHPKSSAYWFMRFL 481
+GY++WS +DNFEWA+GY KRFG+V+V+YK R K SAYW+ +
Sbjct: 394 KGYYIWSFMDNFEWAEGYEKRFGIVHVNYKTQ-ERTIKKSAYWYKELI 440
>pdb|1UYQ|A Chain A, Mutated B-Glucosidase A From Paenibacillus Polymyxa
Showing Increased Stability
Length = 447
Score = 323 bits (827), Expect = 2e-88, Method: Compositional matrix adjust.
Identities = 183/460 (39%), Positives = 269/460 (58%), Gaps = 36/460 (7%)
Query: 24 FPPNFVFGVATSAYQIEGACEEGNRGASIWDDFTHTEGKIIDKSNGDVAVDHYHRYKEDI 83
FP +F++G AT+AYQIEGA +E RG SIWD F HT GK+ + NG+VA D YHRY+EDI
Sbjct: 5 FPQDFMWGTATAAYQIEGAYQEDGRGLSIWDTFAHTPGKVFNGDNGNVACDSYHRYEEDI 64
Query: 84 DLIAKLGFDAYRFSISWSRIFPDGLGTKINMEGITFYNNIIDALLQKGIQPYVTLYHWDL 143
L+ +LG YRFS+SW RIFP+G G ++N EG+ +Y+ ++D L GI+P+ TLYHWDL
Sbjct: 65 RLMKELGIRTYRFSVSWPRIFPNGDG-EVNQEGLDYYHRVVDLLNDNGIEPFCTLYHWDL 123
Query: 144 PLHLHESMGGWLNKEIVKYFEIYADTCFASFGDRVKNWITINEPLQTAVNGYCTGIFAPG 203
P L ++ GGW N+ ++ F +A+T F F ++++W+T NEP A G+ APG
Sbjct: 124 PQALQDA-GGWGNRRTIQAFVQFAETMFREFHGKIQHWLTFNEPWCIAFLSNMLGVHAPG 182
Query: 204 RHQHSSTEPYLVAHHQILAHAAAFSVYQRKYKD-KQGGNIGLVVDCEWAEANSDKIEDKS 262
+ V HH ++AH + R++++ G IG+ + WA S EDK+
Sbjct: 183 LTNLQTAID--VGHHLLVAHGLSV----RRFRELGTSGQIGIAPNVSWAVPYSTSEEDKA 236
Query: 263 AAARRLDFQIGWYLHPIYYGDYPEVMRNNLGDQ--LPKFMQKDKELVRNSLDFVGLNHYT 320
A AR + W+L PIY G YP+ + + +Q D +++ +D +G+N+Y+
Sbjct: 237 ACARTISLHSDWFLQPIYQGSYPQFLVDWFAEQGATVPIQDGDMDIIGEPIDMIGINYYS 296
Query: 321 ---SRFIAHATKSPEEGSFYEAQEMERLVEWEGGEVIGEKAASEWLYVVPWGLRKVLNYI 377
+RF +PE G F +++E+ +G V GL +VL+Y+
Sbjct: 297 MSVNRF------NPEAG-FLQSEEIN----------MGLPVTDIGWPVESRGLYEVLHYL 339
Query: 378 AKTYNNPPIYVTENGMDDEENDSSPLHEMLDDKLRVRYFKGYLSAVAQAIKDGADVRGYF 437
K Y N IY+TENG ND ++ DD+ R+ Y + +L V +AI DG V+GY
Sbjct: 340 QK-YGNIDIYITENGACI--NDEVVNGKVQDDR-RISYMQQHLVQVHRAIHDGLHVKGYM 395
Query: 438 VWSLLDNFEWAQGYTKRFGLVYVDYKNGLVRHPKSSAYWF 477
WSLLDNFEWA+GY RFG+++VD++ VR PK S YW+
Sbjct: 396 AWSLLDNFEWAEGYNMRFGMIHVDFRT-QVRTPKQSYYWY 434
>pdb|1BGG|A Chain A, Glucosidase A From Bacillus Polymyxa Complexed With
Gluconate
pdb|1BGG|B Chain B, Glucosidase A From Bacillus Polymyxa Complexed With
Gluconate
pdb|1BGG|C Chain C, Glucosidase A From Bacillus Polymyxa Complexed With
Gluconate
pdb|1BGG|D Chain D, Glucosidase A From Bacillus Polymyxa Complexed With
Gluconate
Length = 448
Score = 322 bits (824), Expect = 4e-88, Method: Compositional matrix adjust.
Identities = 182/460 (39%), Positives = 268/460 (58%), Gaps = 36/460 (7%)
Query: 24 FPPNFVFGVATSAYQIEGACEEGNRGASIWDDFTHTEGKIIDKSNGDVAVDHYHRYKEDI 83
FP +F++G AT+AYQIEGA +E RG SIWD F HT GK+ + NG+VA D YHRY+EDI
Sbjct: 6 FPQDFMWGTATAAYQIEGAYQEDGRGLSIWDTFAHTPGKVFNGDNGNVACDSYHRYEEDI 65
Query: 84 DLIAKLGFDAYRFSISWSRIFPDGLGTKINMEGITFYNNIIDALLQKGIQPYVTLYHWDL 143
L+ +LG YRFS+SW RIFP+G G ++N EG+ +Y+ ++D L GI+P+ TLYHWDL
Sbjct: 66 RLMKELGIRTYRFSVSWPRIFPNGDG-EVNQEGLDYYHRVVDLLNDNGIEPFCTLYHWDL 124
Query: 144 PLHLHESMGGWLNKEIVKYFEIYADTCFASFGDRVKNWITINEPLQTAVNGYCTGIFAPG 203
P L ++ GGW N+ ++ F +A+T F F ++++W+T NEP A G+ APG
Sbjct: 125 PQALQDA-GGWGNRRTIQAFVQFAETMFREFHGKIQHWLTFNEPWCIAFLSNMLGVHAPG 183
Query: 204 RHQHSSTEPYLVAHHQILAHAAAFSVYQRKYKD-KQGGNIGLVVDCEWAEANSDKIEDKS 262
+ V HH ++AH + R++++ G IG+ + WA S EDK+
Sbjct: 184 LTNLQTAID--VGHHLLVAHGLSV----RRFRELGTSGQIGIAPNVSWAVPYSTSEEDKA 237
Query: 263 AAARRLDFQIGWYLHPIYYGDYPEVMRNNLGDQ--LPKFMQKDKELVRNSLDFVGLNHYT 320
A AR + W+L PIY G YP+ + + +Q D +++ +D +G+N+Y+
Sbjct: 238 ACARTISLHSDWFLQPIYQGSYPQFLVDWFAEQGATVPIQDGDMDIIGEPIDMIGINYYS 297
Query: 321 ---SRFIAHATKSPEEGSFYEAQEMERLVEWEGGEVIGEKAASEWLYVVPWGLRKVLNYI 377
+RF +PE G F +++E+ +G V GL +VL+Y+
Sbjct: 298 MSVNRF------NPEAG-FLQSEEIN----------MGLPVTDIGWPVESRGLYEVLHYL 340
Query: 378 AKTYNNPPIYVTENGMDDEENDSSPLHEMLDDKLRVRYFKGYLSAVAQAIKDGADVRGYF 437
K Y N IY+TENG ND ++ DD+ R+ Y + +L V + I DG V+GY
Sbjct: 341 QK-YGNIDIYITENGACI--NDEVVNGKVQDDR-RISYMQQHLVQVHRTIHDGLHVKGYM 396
Query: 438 VWSLLDNFEWAQGYTKRFGLVYVDYKNGLVRHPKSSAYWF 477
WSLLDNFEWA+GY RFG+++VD++ VR PK S YW+
Sbjct: 397 AWSLLDNFEWAEGYNMRFGMIHVDFRT-QVRTPKESYYWY 435
>pdb|1BGA|A Chain A, Beta-Glucosidase A From Bacillus Polymyxa
pdb|1BGA|B Chain B, Beta-Glucosidase A From Bacillus Polymyxa
pdb|1BGA|C Chain C, Beta-Glucosidase A From Bacillus Polymyxa
pdb|1BGA|D Chain D, Beta-Glucosidase A From Bacillus Polymyxa
Length = 447
Score = 321 bits (822), Expect = 6e-88, Method: Compositional matrix adjust.
Identities = 182/460 (39%), Positives = 268/460 (58%), Gaps = 36/460 (7%)
Query: 24 FPPNFVFGVATSAYQIEGACEEGNRGASIWDDFTHTEGKIIDKSNGDVAVDHYHRYKEDI 83
FP +F++G AT+AYQIEGA +E RG SIWD F HT GK+ + NG+VA D YHRY+EDI
Sbjct: 5 FPQDFMWGTATAAYQIEGAYQEDGRGLSIWDTFAHTPGKVFNGDNGNVACDSYHRYEEDI 64
Query: 84 DLIAKLGFDAYRFSISWSRIFPDGLGTKINMEGITFYNNIIDALLQKGIQPYVTLYHWDL 143
L+ +LG YRFS+SW RIFP+G G ++N EG+ +Y+ ++D L GI+P+ TLYHWDL
Sbjct: 65 RLMKELGIRTYRFSVSWPRIFPNGDG-EVNQEGLDYYHRVVDLLNDNGIEPFCTLYHWDL 123
Query: 144 PLHLHESMGGWLNKEIVKYFEIYADTCFASFGDRVKNWITINEPLQTAVNGYCTGIFAPG 203
P L ++ GGW N+ ++ F +A+T F F ++++W+T NEP A G+ APG
Sbjct: 124 PQALQDA-GGWGNRRTIQAFVQFAETMFREFHGKIQHWLTFNEPWCIAFLSNMLGVHAPG 182
Query: 204 RHQHSSTEPYLVAHHQILAHAAAFSVYQRKYKD-KQGGNIGLVVDCEWAEANSDKIEDKS 262
+ V HH ++AH + R++++ G IG+ + WA S EDK+
Sbjct: 183 LTNLQTAID--VGHHLLVAHGLSV----RRFRELGTSGQIGIAPNVSWAVPYSTSEEDKA 236
Query: 263 AAARRLDFQIGWYLHPIYYGDYPEVMRNNLGDQ--LPKFMQKDKELVRNSLDFVGLNHYT 320
A AR + W+L PIY G YP+ + + +Q D +++ +D +G+N+Y+
Sbjct: 237 ACARTISLHSDWFLQPIYQGSYPQFLVDWFAEQGATVPIQDGDMDIIGEPIDMIGINYYS 296
Query: 321 ---SRFIAHATKSPEEGSFYEAQEMERLVEWEGGEVIGEKAASEWLYVVPWGLRKVLNYI 377
+RF +PE G F +++E+ +G V GL +VL+Y+
Sbjct: 297 MSVNRF------NPEAG-FLQSEEIN----------MGLPVTDIGWPVESRGLYEVLHYL 339
Query: 378 AKTYNNPPIYVTENGMDDEENDSSPLHEMLDDKLRVRYFKGYLSAVAQAIKDGADVRGYF 437
K Y N IY+TENG ND ++ DD+ R+ Y + +L V + I DG V+GY
Sbjct: 340 QK-YGNIDIYITENGACI--NDEVVNGKVQDDR-RISYMQQHLVQVHRTIHDGLHVKGYM 395
Query: 438 VWSLLDNFEWAQGYTKRFGLVYVDYKNGLVRHPKSSAYWF 477
WSLLDNFEWA+GY RFG+++VD++ VR PK S YW+
Sbjct: 396 AWSLLDNFEWAEGYNMRFGMIHVDFRT-QVRTPKESYYWY 434
>pdb|1E4I|A Chain A, 2-Deoxy-2-Fluoro-Beta-D-GlucosylENZYME INTERMEDIATE
Complex Of The Beta-Glucosidase From Bacillus Polymyxa
Length = 447
Score = 320 bits (819), Expect = 2e-87, Method: Compositional matrix adjust.
Identities = 181/460 (39%), Positives = 268/460 (58%), Gaps = 36/460 (7%)
Query: 24 FPPNFVFGVATSAYQIEGACEEGNRGASIWDDFTHTEGKIIDKSNGDVAVDHYHRYKEDI 83
FP +F++G AT+AYQIEGA +E RG SIWD F HT GK+ + NG+VA D YHRY+EDI
Sbjct: 5 FPQDFMWGTATAAYQIEGAYQEDGRGLSIWDTFAHTPGKVFNGDNGNVACDSYHRYEEDI 64
Query: 84 DLIAKLGFDAYRFSISWSRIFPDGLGTKINMEGITFYNNIIDALLQKGIQPYVTLYHWDL 143
L+ +LG YRFS+SW RIFP+G G ++N +G+ +Y+ ++D L GI+P+ TLYHWDL
Sbjct: 65 RLMKELGIRTYRFSVSWPRIFPNGDG-EVNQKGLDYYHRVVDLLNDNGIEPFCTLYHWDL 123
Query: 144 PLHLHESMGGWLNKEIVKYFEIYADTCFASFGDRVKNWITINEPLQTAVNGYCTGIFAPG 203
P L ++ GGW N+ ++ F +A+T F F ++++W+T NEP A G+ APG
Sbjct: 124 PQALQDA-GGWGNRRTIQAFVQFAETMFREFHGKIQHWLTFNEPWCIAFLSNMLGVHAPG 182
Query: 204 RHQHSSTEPYLVAHHQILAHAAAFSVYQRKYKD-KQGGNIGLVVDCEWAEANSDKIEDKS 262
+ V HH ++AH + R++++ G IG+ + WA S EDK+
Sbjct: 183 LTNLQTAID--VGHHLLVAHGLSV----RRFRELGTSGQIGIAPNVSWAVPYSTSEEDKA 236
Query: 263 AAARRLDFQIGWYLHPIYYGDYPEVMRNNLGDQ--LPKFMQKDKELVRNSLDFVGLNHYT 320
A AR + W+L PIY G YP+ + + +Q D +++ +D +G+N+Y+
Sbjct: 237 ACARTISLHSDWFLQPIYQGSYPQFLVDWFAEQGATVPIQDGDMDIIGEPIDMIGINYYS 296
Query: 321 ---SRFIAHATKSPEEGSFYEAQEMERLVEWEGGEVIGEKAASEWLYVVPWGLRKVLNYI 377
+RF +PE G F +++E+ +G V GL +VL+Y+
Sbjct: 297 MSVNRF------NPEAG-FLQSEEIN----------MGLPVTDIGWPVESRGLYEVLHYL 339
Query: 378 AKTYNNPPIYVTENGMDDEENDSSPLHEMLDDKLRVRYFKGYLSAVAQAIKDGADVRGYF 437
K Y N IY+TENG ND ++ DD+ R+ Y + +L V + I DG V+GY
Sbjct: 340 QK-YGNIDIYITENGAC--INDEVVNGKVQDDR-RISYMQQHLVQVHRTIHDGLHVKGYM 395
Query: 438 VWSLLDNFEWAQGYTKRFGLVYVDYKNGLVRHPKSSAYWF 477
WSLLDNFEWA+GY RFG+++VD++ VR PK S YW+
Sbjct: 396 AWSLLDNFEWAEGYNMRFGMIHVDFRT-QVRTPKQSYYWY 434
>pdb|1TR1|A Chain A, Crystal Structure Of E96k Mutated Beta-glucosidase A From
Bacillus Polymyxa, An Enzyme With Increased
Thermoresistance
pdb|1TR1|B Chain B, Crystal Structure Of E96k Mutated Beta-glucosidase A From
Bacillus Polymyxa, An Enzyme With Increased
Thermoresistance
pdb|1TR1|C Chain C, Crystal Structure Of E96k Mutated Beta-glucosidase A From
Bacillus Polymyxa, An Enzyme With Increased
Thermoresistance
pdb|1TR1|D Chain D, Crystal Structure Of E96k Mutated Beta-glucosidase A From
Bacillus Polymyxa, An Enzyme With Increased
Thermoresistance
Length = 447
Score = 319 bits (818), Expect = 2e-87, Method: Compositional matrix adjust.
Identities = 181/460 (39%), Positives = 268/460 (58%), Gaps = 36/460 (7%)
Query: 24 FPPNFVFGVATSAYQIEGACEEGNRGASIWDDFTHTEGKIIDKSNGDVAVDHYHRYKEDI 83
FP +F++G AT+AYQIEGA +E RG SIWD F HT GK+ + NG+VA D YHRY+EDI
Sbjct: 5 FPQDFMWGTATAAYQIEGAYQEDGRGLSIWDTFAHTPGKVFNGDNGNVACDSYHRYEEDI 64
Query: 84 DLIAKLGFDAYRFSISWSRIFPDGLGTKINMEGITFYNNIIDALLQKGIQPYVTLYHWDL 143
L+ +LG YRFS+SW RIFP+G G ++N +G+ +Y+ ++D L GI+P+ TLYHWDL
Sbjct: 65 RLMKELGIRTYRFSVSWPRIFPNGDG-EVNQKGLDYYHRVVDLLNDNGIEPFCTLYHWDL 123
Query: 144 PLHLHESMGGWLNKEIVKYFEIYADTCFASFGDRVKNWITINEPLQTAVNGYCTGIFAPG 203
P L ++ GGW N+ ++ F +A+T F F ++++W+T NEP A G+ APG
Sbjct: 124 PQALQDA-GGWGNRRTIQAFVQFAETMFREFHGKIQHWLTFNEPWCIAFLSNMLGVHAPG 182
Query: 204 RHQHSSTEPYLVAHHQILAHAAAFSVYQRKYKD-KQGGNIGLVVDCEWAEANSDKIEDKS 262
+ V HH ++AH + R++++ G IG+ + WA S EDK+
Sbjct: 183 LTNLQTAID--VGHHLLVAHGLSV----RRFRELGTSGQIGIAPNVSWAVPYSTSEEDKA 236
Query: 263 AAARRLDFQIGWYLHPIYYGDYPEVMRNNLGDQ--LPKFMQKDKELVRNSLDFVGLNHYT 320
A AR + W+L PIY G YP+ + + +Q D +++ +D +G+N+Y+
Sbjct: 237 ACARTISLHSDWFLQPIYQGSYPQFLVDWFAEQGATVPIQDGDMDIIGEPIDMIGINYYS 296
Query: 321 ---SRFIAHATKSPEEGSFYEAQEMERLVEWEGGEVIGEKAASEWLYVVPWGLRKVLNYI 377
+RF +PE G F +++E+ +G V GL +VL+Y+
Sbjct: 297 MSVNRF------NPEAG-FLQSEEIN----------MGLPVTDIGWPVESRGLYEVLHYL 339
Query: 378 AKTYNNPPIYVTENGMDDEENDSSPLHEMLDDKLRVRYFKGYLSAVAQAIKDGADVRGYF 437
K Y N IY+TENG ND ++ DD+ R+ Y + +L V + I DG V+GY
Sbjct: 340 QK-YGNIDIYITENGACI--NDEVVNGKVQDDR-RISYMQQHLVQVHRTIHDGLHVKGYM 395
Query: 438 VWSLLDNFEWAQGYTKRFGLVYVDYKNGLVRHPKSSAYWF 477
WSLLDNFEWA+GY RFG+++VD++ VR PK S YW+
Sbjct: 396 AWSLLDNFEWAEGYNMRFGMIHVDFRT-QVRTPKESYYWY 434
>pdb|1E6Q|M Chain M, Myrosinase From Sinapis Alba With The Bound Transition
State Analogue Gluco-Tetrazole
pdb|1E6X|M Chain M, Myrosinase From Sinapis Alba With A Bound Transition State
Analogue,D-Glucono-1,5-Lactone
pdb|1E70|M Chain M, 2-F-Glucosylated Myrosinase From Sinapis Alba
pdb|1E71|M Chain M, Myrosinase From Sinapis Alba With Bound Ascorbate
pdb|1E72|M Chain M, Myrosinase From Sinapis Alba With Bound
Gluco-Hydroximolactam And Sulfate Or Ascorbate
pdb|1E73|M Chain M, 2-F-Glucosylated Myrosinase From Sinapis Alba With Bound
L-Ascorbate
pdb|1E6S|M Chain M, Myrosinase From Sinapis Alba With Bound
Gluco-Hydroximolactam And Sulfate
pdb|1E4M|M Chain M, Myrosinase From Sinapis Alba
pdb|1W9B|M Chain M, S. Alba Myrosinase In Complex With Carba-Glucotropaeolin
pdb|1W9D|M Chain M, S. Alba Myrosinase In Complex With S-Ethyl
Phenylacetothiohydroximate-O-Sulfate
pdb|2WXD|M Chain M, A Micromolar O-Sulfated Thiohydroximate Inhibitor Bound To
Plant Myrosinase
Length = 501
Score = 317 bits (813), Expect = 7e-87, Method: Compositional matrix adjust.
Identities = 185/479 (38%), Positives = 276/479 (57%), Gaps = 39/479 (8%)
Query: 31 GVATSAYQIEGACEEGNRGASIWDDFTH--TEGKIIDKSNGDVAVDHYHRYKEDIDLIAK 88
GVA+SAYQIEG RG +IWD FTH D NGD D + +++DID++ +
Sbjct: 32 GVASSAYQIEGTI---GRGLNIWDGFTHRYPNKSGPDHGNGDTTCDSFSYWQKDIDVLDE 88
Query: 89 LGFDAYRFSISWSRIFPDGLGTK-INMEGITFYNNIIDALLQKGIQPYVTLYHWDLPLHL 147
L YRFSI+WSRI P G ++ +N +GI +Y+ +I L++KGI P+VTL+HWDLP L
Sbjct: 89 LNATGYRFSIAWSRIIPRGKRSRGVNEKGIDYYHGLISGLIKKGITPFVTLFHWDLPQTL 148
Query: 148 HESMGGWLNKEIVKYFEIYADTCFASFGDRVKNWITINEPLQTAVNGYCTGIFAPGRHQ- 206
+ G+L+ +I+ F+ YAD CF FGD VK W+TIN+ GY + + APGR
Sbjct: 149 QDEYEGFLDPQIIDDFKDYADLCFEEFGDSVKYWLTINQLYSVPTRGYGSALDAPGRCSP 208
Query: 207 ---------HSSTEPYLVAHHQILAHAAAFSVYQRKYKDKQGGNIGLVVDCEWAEANSDK 257
+SSTEPY+VAHHQ+LAHA +Y++ Y QGG IG + W +D
Sbjct: 209 TVDPSCYAGNSSTEPYIVAHHQLLAHAKVVDLYRKNYT-HQGGKIGPTMITRWFLPYNDT 267
Query: 258 IEDKSAAARRL-DFQIGWYLHPIYYGDYPEVMRNNLGDQLPKFMQKDKELVRNSLDFVGL 316
AA R+ +F +GW++ P+ G YP++M + +G++LP F ++ LV+ S DF+GL
Sbjct: 268 DRHSIAATERMKEFFLGWFMGPLTNGTYPQIMIDTVGERLPSFSPEESNLVKGSYDFLGL 327
Query: 317 NHYTSRFIAHATKSPEEGSFYEAQEMERLVEWE----GGEVIG-----EKA-ASEWLYVV 366
N+Y +++ A + +P + + A M+ + G IG +KA +++ +Y
Sbjct: 328 NYYFTQY-AQPSPNPVNSTNHTAM-MDAGAKLTYINASGHYIGPLFEKDKADSTDNIYYY 385
Query: 367 PWGLRKVLNYIAKTYNNPPIYVTENGMD---DEENDSSPLHEMLDDKLRVRYFKGYLSAV 423
P G+ V++Y Y NP IYVTENG+ DE + S L D R+ Y +L +
Sbjct: 386 PKGIYSVMDYFKNKYYNPLIYVTENGISTPGDENRNQSML-----DYTRIDYLCSHLCFL 440
Query: 424 AQAIKD-GADVRGYFVWSLLDNFEWAQGYTKRFGLVYVDYKNGLVRHPKSSAYWFMRFL 481
+ IK+ +V+GY W+L DN+E+ +G+T RFGL Y+D+ N R K S W+ F+
Sbjct: 441 NKVIKEKDVNVKGYLAWALGDNYEFNKGFTVRFGLSYIDWNNVTDRDLKKSGQWYQSFI 499
>pdb|1DWA|M Chain M, Study On Radiation Damage On A Cryocooled Crystal. Part 1:
Structure Prior To Irradiation
pdb|1DWF|M Chain M, Study On Radiation Damage On A Cryocooled Crystal. Part 2:
Structure After Irradiation With 9.110e15 PhotonsMM2
pdb|1DWG|M Chain M, Study On Radiation Damage On A Cryocooled Crystal: Part 3
Structure After Irradiation With 18.210e15 PhotonsMM2.
pdb|1DWH|M Chain M, Study On Radiation Damage On A Cryocooled Crystal. Part 4:
Structure After Irradiation With 27.210e15 PhotonsMM2
pdb|1DWI|M Chain M, Study On Radiation Damage On A Cryocooled Crystal. Part 5:
Structure After Irradiation With 54.010e15 PhotonsMM2
pdb|1DWJ|M Chain M, Study On Radiation Damage On A Cryocooled Crystal. Refined
Part 6: Structure After A Radiation Dose Of 5410e15
PhotonsMM2
Length = 499
Score = 317 bits (813), Expect = 8e-87, Method: Compositional matrix adjust.
Identities = 185/479 (38%), Positives = 276/479 (57%), Gaps = 39/479 (8%)
Query: 31 GVATSAYQIEGACEEGNRGASIWDDFTH--TEGKIIDKSNGDVAVDHYHRYKEDIDLIAK 88
GVA+SAYQIEG RG +IWD FTH D NGD D + +++DID++ +
Sbjct: 30 GVASSAYQIEGTI---GRGLNIWDGFTHRYPNKSGPDHGNGDTTCDSFSYWQKDIDVLDE 86
Query: 89 LGFDAYRFSISWSRIFPDGLGTK-INMEGITFYNNIIDALLQKGIQPYVTLYHWDLPLHL 147
L YRFSI+WSRI P G ++ +N +GI +Y+ +I L++KGI P+VTL+HWDLP L
Sbjct: 87 LNATGYRFSIAWSRIIPRGKRSRGVNEKGIDYYHGLISGLIKKGITPFVTLFHWDLPQTL 146
Query: 148 HESMGGWLNKEIVKYFEIYADTCFASFGDRVKNWITINEPLQTAVNGYCTGIFAPGRHQ- 206
+ G+L+ +I+ F+ YAD CF FGD VK W+TIN+ GY + + APGR
Sbjct: 147 QDEYEGFLDPQIIDDFKDYADLCFEEFGDSVKYWLTINQLYSVPTRGYGSALDAPGRCSP 206
Query: 207 ---------HSSTEPYLVAHHQILAHAAAFSVYQRKYKDKQGGNIGLVVDCEWAEANSDK 257
+SSTEPY+VAHHQ+LAHA +Y++ Y QGG IG + W +D
Sbjct: 207 TVDPSCYAGNSSTEPYIVAHHQLLAHAKVVDLYRKNYT-HQGGKIGPTMITRWFLPYNDT 265
Query: 258 IEDKSAAARRL-DFQIGWYLHPIYYGDYPEVMRNNLGDQLPKFMQKDKELVRNSLDFVGL 316
AA R+ +F +GW++ P+ G YP++M + +G++LP F ++ LV+ S DF+GL
Sbjct: 266 DRHSIAATERMKEFFLGWFMGPLTNGTYPQIMIDTVGERLPSFSPEESNLVKGSYDFLGL 325
Query: 317 NHYTSRFIAHATKSPEEGSFYEAQEMERLVEWE----GGEVIG-----EKA-ASEWLYVV 366
N+Y +++ A + +P + + A M+ + G IG +KA +++ +Y
Sbjct: 326 NYYFTQY-AQPSPNPVNSTNHTAM-MDAGAKLTYINASGHYIGPLFEKDKADSTDNIYYY 383
Query: 367 PWGLRKVLNYIAKTYNNPPIYVTENGMD---DEENDSSPLHEMLDDKLRVRYFKGYLSAV 423
P G+ V++Y Y NP IYVTENG+ DE + S L D R+ Y +L +
Sbjct: 384 PKGIYSVMDYFKNKYYNPLIYVTENGISTPGDENRNQSML-----DYTRIDYLCSHLCFL 438
Query: 424 AQAIKD-GADVRGYFVWSLLDNFEWAQGYTKRFGLVYVDYKNGLVRHPKSSAYWFMRFL 481
+ IK+ +V+GY W+L DN+E+ +G+T RFGL Y+D+ N R K S W+ F+
Sbjct: 439 NKVIKEKDVNVKGYLAWALGDNYEFNKGFTVRFGLSYIDWNNVTDRDLKKSGQWYQTFI 497
>pdb|3CMJ|A Chain A, Crystal Structure Of Engineered Beta-Glucosidase From Soil
Metagenome
Length = 465
Score = 317 bits (811), Expect = 1e-86, Method: Compositional matrix adjust.
Identities = 184/466 (39%), Positives = 263/466 (56%), Gaps = 39/466 (8%)
Query: 18 NVSKTDFPPNFVFGVATSAYQIEGACEEGNRGASIWDDFTHTEGKIIDKSNGDVAVDHYH 77
NV K FP F++G ATS+YQIEGA E +G SIWD FT GKI + +GDVA DHYH
Sbjct: 22 NVKK--FPEGFLWGAATSSYQIEGAWNEDGKGESIWDRFTRIPGKIKNGDSGDVACDHYH 79
Query: 78 RYKEDIDLIAKLGFDAYRFSISWSRIFPDGLGTKINMEGITFYNNIIDALLQKGIQPYVT 137
RY++D+DL+ +LG YRFSI+W+RI PD +IN G+ FY +++ L ++ I P T
Sbjct: 80 RYEQDLDLMRQLGLKTYRFSIAWARIQPDS-SRQINQRGLDFYRRLVEGLHKRDILPMAT 138
Query: 138 LYHWDLPLHLHESMGGWLNKEIVKYFEIYADTCFASFGDRVKNWITINEPLQTAVNGYCT 197
LYHWDLP + E GGWL++E F Y A+ GD++ W+T NEP+ T GY
Sbjct: 139 LYHWDLPQWV-EDEGGWLSRESASRFAEYTHALVAALGDQIPLWVTHNEPMVTVWAGYHM 197
Query: 198 GIFAPGRHQHSSTEPYL---VAHHQILAHAAAFSVYQRKYKDKQGGNIGLVVDCEWAEAN 254
G+FAPG +P L VAHH +L+H A + + G +G+ ++
Sbjct: 198 GLFAPGL-----KDPTLGGRVAHHLLLSHGQALQAF--RALSPAGSQMGITLNFNTIYPV 250
Query: 255 SDKIEDKSAAARRLDFQIGWYLHPIYYGDYPEVMRNNLGDQLPKFMQ-KDKELVRNSLDF 313
S + D AA R FQ +L P+ G Y + + LP+F+ +D + + +DF
Sbjct: 251 SAEPADVEAARRMHSFQNELFLEPLIRGQYNQATLMAYPN-LPEFIAPEDMQTISAPIDF 309
Query: 314 VGLNHYTSRFIAHATKSPEEGSFYEAQEMERLVEWEGGEVIGEKAASEWLYVVPWGLRKV 373
+G+N+Y + + + P E ++E V G E + P GL +
Sbjct: 310 LGVNYYNPMRVKSSPQPPG----IEVVQVESPVTAMGWE------------IAPEGLYDL 353
Query: 374 LNYIAKTYNNPPIYVTENG--MDDEENDSSPLHEMLDDKLRVRYFKGYLSAVAQAIKDGA 431
L I +TY PIY+TENG DD+ + S ++D RV YF+G++ A +A+ DG
Sbjct: 354 LMGITRTYGKLPIYITENGAAFDDQPDQSG----QVNDPQRVGYFQGHIGAARRALADGV 409
Query: 432 DVRGYFVWSLLDNFEWAQGYTKRFGLVYVDYKNGLVRHPKSSAYWF 477
D+RGY+ WSLLDNFEWA+GY+KRFG++YVD++ R K SA W+
Sbjct: 410 DLRGYYAWSLLDNFEWAEGYSKRFGIIYVDFET-QQRTLKQSAQWY 454
>pdb|4HZ6|A Chain A, Crystal Structure Of Bglb
pdb|4HZ7|A Chain A, Crystal Structure Of Bglb With Glucose
pdb|4HZ8|A Chain A, Crystal Structure Of Bglb With Natural Substrate
Length = 444
Score = 316 bits (810), Expect = 2e-86, Method: Compositional matrix adjust.
Identities = 184/466 (39%), Positives = 263/466 (56%), Gaps = 39/466 (8%)
Query: 18 NVSKTDFPPNFVFGVATSAYQIEGACEEGNRGASIWDDFTHTEGKIIDKSNGDVAVDHYH 77
NV K FP F++G ATS+YQIEGA E +G SIWD FT GKI + +GDVA DHYH
Sbjct: 1 NVKK--FPEGFLWGAATSSYQIEGAWNEDGKGESIWDRFTRIPGKIKNGDSGDVACDHYH 58
Query: 78 RYKEDIDLIAKLGFDAYRFSISWSRIFPDGLGTKINMEGITFYNNIIDALLQKGIQPYVT 137
RY++D+DL+ +LG YRFSI+W+RI PD +IN G+ FY +++ L ++ I P T
Sbjct: 59 RYEQDLDLMRQLGLKTYRFSIAWARIQPDS-SRQINQRGLDFYRRLVEGLHKRDILPMAT 117
Query: 138 LYHWDLPLHLHESMGGWLNKEIVKYFEIYADTCFASFGDRVKNWITINEPLQTAVNGYCT 197
LYHWDLP + E GGWL++E F Y A+ GD++ W+T NEP+ T GY
Sbjct: 118 LYHWDLPQWV-EDEGGWLSRESASRFAEYTHALVAALGDQIPLWVTHNEPMVTVWAGYHM 176
Query: 198 GIFAPGRHQHSSTEPYL---VAHHQILAHAAAFSVYQRKYKDKQGGNIGLVVDCEWAEAN 254
G+FAPG +P L VAHH +L+H A + + G +G+ ++
Sbjct: 177 GLFAPGL-----KDPTLGGRVAHHLLLSHGQALQAF--RALSPAGSQMGITLNFNTIYPV 229
Query: 255 SDKIEDKSAAARRLDFQIGWYLHPIYYGDYPEVMRNNLGDQLPKFMQ-KDKELVRNSLDF 313
S + D AA R FQ +L P+ G Y + + LP+F+ +D + + +DF
Sbjct: 230 SAEPADVEAARRMHSFQNELFLEPLIRGQYNQATLMAYPN-LPEFIAPEDMQTISAPIDF 288
Query: 314 VGLNHYTSRFIAHATKSPEEGSFYEAQEMERLVEWEGGEVIGEKAASEWLYVVPWGLRKV 373
+G+N+Y + + + P E ++E V G E + P GL +
Sbjct: 289 LGVNYYNPMRVKSSPQPPG----IEVVQVESPVTAMGWE------------IAPEGLYDL 332
Query: 374 LNYIAKTYNNPPIYVTENG--MDDEENDSSPLHEMLDDKLRVRYFKGYLSAVAQAIKDGA 431
L I +TY PIY+TENG DD+ + S ++D RV YF+G++ A +A+ DG
Sbjct: 333 LMGITRTYGKLPIYITENGAAFDDQPDQSG----QVNDPQRVGYFQGHIGAARRALADGV 388
Query: 432 DVRGYFVWSLLDNFEWAQGYTKRFGLVYVDYKNGLVRHPKSSAYWF 477
D+RGY+ WSLLDNFEWA+GY+KRFG++YVD++ R K SA W+
Sbjct: 389 DLRGYYAWSLLDNFEWAEGYSKRFGIIYVDFET-QQRTLKQSAQWY 433
>pdb|1GNX|A Chain A, B-Glucosidase From Streptomyces Sp
pdb|1GNX|B Chain B, B-Glucosidase From Streptomyces Sp
pdb|1GON|A Chain A, B-Glucosidase From Streptomyces Sp
pdb|1GON|B Chain B, B-Glucosidase From Streptomyces Sp
Length = 479
Score = 313 bits (803), Expect = 9e-86, Method: Compositional matrix adjust.
Identities = 190/469 (40%), Positives = 264/469 (56%), Gaps = 34/469 (7%)
Query: 24 FPPNFVFGVATSAYQIEGACEEGNRGASIWDDFTHTEGKIIDKSNGDVAVDHYHRYKEDI 83
FP F++G AT++YQIEGA E R SIWD + T G++ + GDVA DHYHR++ED+
Sbjct: 18 FPEGFLWGSATASYQIEGAAAEDGRTPSIWDTYARTPGRVRNGDTGDVATDHYHRWREDV 77
Query: 84 DLIAKLGFDAYRFSISWSRIFPDGLGTKINMEGITFYNNIIDALLQKGIQPYVTLYHWDL 143
L+A+LG AYRFS++W RI P G G + +G+ FY + D LL KGIQP TLYHWDL
Sbjct: 78 ALMAELGLGAYRFSLAWPRIQPTGRGPALQ-KGLDFYRRLADELLAKGIQPVATLYHWDL 136
Query: 144 PLHLHESMGGWLNKEIVKYFEIYADTCFASFGDRVKNWITINEPLQTAVNGYCTGIFAPG 203
P L E+ GGW + + F YA + GDRVK W T+NEP +A GY +G+ APG
Sbjct: 137 PQEL-ENAGGWPERATAERFAEYAAIAADALGDRVKTWTTLNEPWCSAFLGYGSGVHAPG 195
Query: 204 RHQHSSTEPYL---VAHHQILAHAAAF-SVYQRKYKDKQGG---NIGLVVDCEWAEANSD 256
R T+P AHH L H A ++ R D Q NI V ++A++D
Sbjct: 196 R-----TDPVAALRAAHHLNLGHGLAVQALRDRLPADAQCSVTLNIHHVRPLTDSDADAD 250
Query: 257 KIEDKSAAARRLDFQIGWYLHPIYYGDYPE-VMRNNLGDQLPKFMQK-DKELVRNSLDFV 314
+ A A R+ + P+ G YPE ++++ G F++ D L LDF+
Sbjct: 251 AVRRIDALANRV------FTGPMLQGAYPEDLVKDTAGLTDWSFVRDGDLRLAHQKLDFL 304
Query: 315 GLNHYTSRFIAHATKSPEEGSFYEAQEMERLVEWEGGEVI------GEKAASEWLYVVPW 368
G+N+Y+ ++ A S S + W G + + GE A W V P
Sbjct: 305 GVNYYSPTLVSEADGSGTHNSDGHGRSAHS--PWPGADRVAFHQPPGETTAMGWA-VDPS 361
Query: 369 GLRKVLNYIAKTYNNPPIYVTENGMDDEENDSSPLHEMLDDKLRVRYFKGYLSAVAQAIK 428
GL ++L ++ + P+ +TENG +D + ++D R+ Y + +L+AV +AIK
Sbjct: 362 GLYELLRRLSSDFPALPLVITENGA--AFHDYADPEGNVNDPERIAYVRDHLAAVHRAIK 419
Query: 429 DGADVRGYFVWSLLDNFEWAQGYTKRFGLVYVDYKNGLVRHPKSSAYWF 477
DG+DVRGYF+WSLLDNFEWA GY+KRFG VYVDY G R PK+SA W+
Sbjct: 420 DGSDVRGYFLWSLLDNFEWAHGYSKRFGAVYVDYPTG-TRIPKASARWY 467
>pdb|2O9R|A Chain A, Beta-Glucosidase B Complexed With Thiocellobiose
Length = 452
Score = 312 bits (800), Expect = 3e-85, Method: Compositional matrix adjust.
Identities = 183/466 (39%), Positives = 266/466 (57%), Gaps = 38/466 (8%)
Query: 24 FPPNFVFGVATSAYQIEGACEEGNRGASIWDDFTHTEGKIIDKSNGDVAVDHYHRYKEDI 83
FP F++G +TS+YQIEG +EG R SIWD F GK+I GDVA DH+H +KED+
Sbjct: 12 FPATFMWGTSTSSYQIEGGTDEGGRTPSIWDTFCQIPGKVIGGDCGDVACDHFHHFKEDV 71
Query: 84 DLIAKLGFDAYRFSISWSRIFPDGLGTKINMEGITFYNNIIDALLQKGIQPYVTLYHWDL 143
L+ +LGF YRFS++W RI P IN EG+ FY +++D + G+ P +TLYHWDL
Sbjct: 72 QLMKQLGFLHYRFSVAWPRIMP--AAGIINEEGLLFYEHLLDEIELAGLIPMLTLYHWDL 129
Query: 144 PLHLHESMGGWLNKEIVKYFEIYADTCFASFGDRVKNWITINEPLQTAVNGYCTGIFAPG 203
P + E GGW +E +++F+ YA FG+R+ W TINEP ++ GY TG APG
Sbjct: 130 PQWI-EDEGGWTQRETIQHFKTYASVIMDRFGERINWWNTINEPYCASILGYGTGEHAPG 188
Query: 204 RHQHSSTEPYLVAHHQILAHAAAFSVYQRKYKDKQGGNIGLVVDCEWAEANSDKIEDKSA 263
+ E + AHH ++ H A ++++ K G IG+ ++ E +A S++ ED +A
Sbjct: 189 --HENWREAFTAAHHILMCHGIASNLHKEK---GLTGKIGITLNMEHVDAASERPEDVAA 243
Query: 264 AARRLDFQIGWYLHPIYYGDYPEVMRNNLGDQLP--KFMQK-DKELVRNSLDFVGLNHYT 320
A RR F W+ P++ G YPE M G L F+Q D EL++ DF+G+N+YT
Sbjct: 244 AIRRDGFINRWFAEPLFNGKYPEDMVEWYGTYLNGLDFVQPGDMELIQQPGDFLGINYYT 303
Query: 321 SRFIAHATKSPEEGSFYEAQE--MERLVEWEGGEVIGEKAASEWLYVVPWGLRKVLNYIA 378
I +S + S + ++ ME V G E + P K+L I
Sbjct: 304 RSII----RSTNDASLLQVEQVHMEEPVTDMGWE------------IHPESFYKLLTRIE 347
Query: 379 KTYNNP-PIYVTENG--MDDEENDSSPLHEMLDDKLRVRYFKGYLSAVAQAIKDGADVRG 435
K ++ PI +TENG M DE ++ ++D R RY + +L A + I++G ++G
Sbjct: 348 KDFSKGLPILITENGAAMRDE-----LVNGQIEDTGRQRYIEEHLKACHRFIEEGGQLKG 402
Query: 436 YFVWSLLDNFEWAQGYTKRFGLVYVDYKNGLVRHPKSSAYWFMRFL 481
YFVWS LDNFEWA GY+KRFG+V+++Y+ R PK SA WF + +
Sbjct: 403 YFVWSFLDNFEWAWGYSKRFGIVHINYET-QERTPKQSALWFKQMM 447
>pdb|2O9P|A Chain A, Beta-Glucosidase B From Paenibacillus Polymyxa
pdb|2O9T|A Chain A, Beta-Glucosidase B From Bacillus Polymyxa Complexed With
Glucose
pdb|2Z1S|A Chain A, Beta-Glucosidase B From Paenibacillus Polymyxa Complexed
With Cellotetraose
Length = 454
Score = 312 bits (799), Expect = 3e-85, Method: Compositional matrix adjust.
Identities = 183/466 (39%), Positives = 266/466 (57%), Gaps = 38/466 (8%)
Query: 24 FPPNFVFGVATSAYQIEGACEEGNRGASIWDDFTHTEGKIIDKSNGDVAVDHYHRYKEDI 83
FP F++G +TS+YQIEG +EG R SIWD F GK+I GDVA DH+H +KED+
Sbjct: 14 FPATFMWGTSTSSYQIEGGTDEGGRTPSIWDTFCQIPGKVIGGDCGDVACDHFHHFKEDV 73
Query: 84 DLIAKLGFDAYRFSISWSRIFPDGLGTKINMEGITFYNNIIDALLQKGIQPYVTLYHWDL 143
L+ +LGF YRFS++W RI P IN EG+ FY +++D + G+ P +TLYHWDL
Sbjct: 74 QLMKQLGFLHYRFSVAWPRIMP--AAGIINEEGLLFYEHLLDEIELAGLIPMLTLYHWDL 131
Query: 144 PLHLHESMGGWLNKEIVKYFEIYADTCFASFGDRVKNWITINEPLQTAVNGYCTGIFAPG 203
P + E GGW +E +++F+ YA FG+R+ W TINEP ++ GY TG APG
Sbjct: 132 PQWI-EDEGGWTQRETIQHFKTYASVIMDRFGERINWWNTINEPYCASILGYGTGEHAPG 190
Query: 204 RHQHSSTEPYLVAHHQILAHAAAFSVYQRKYKDKQGGNIGLVVDCEWAEANSDKIEDKSA 263
+ E + AHH ++ H A ++++ K G IG+ ++ E +A S++ ED +A
Sbjct: 191 --HENWREAFTAAHHILMCHGIASNLHKEK---GLTGKIGITLNMEHVDAASERPEDVAA 245
Query: 264 AARRLDFQIGWYLHPIYYGDYPEVMRNNLGDQLP--KFMQK-DKELVRNSLDFVGLNHYT 320
A RR F W+ P++ G YPE M G L F+Q D EL++ DF+G+N+YT
Sbjct: 246 AIRRDGFINRWFAEPLFNGKYPEDMVEWYGTYLNGLDFVQPGDMELIQQPGDFLGINYYT 305
Query: 321 SRFIAHATKSPEEGSFYEAQE--MERLVEWEGGEVIGEKAASEWLYVVPWGLRKVLNYIA 378
I +S + S + ++ ME V G E + P K+L I
Sbjct: 306 RSII----RSTNDASLLQVEQVHMEEPVTDMGWE------------IHPESFYKLLTRIE 349
Query: 379 KTYNNP-PIYVTENG--MDDEENDSSPLHEMLDDKLRVRYFKGYLSAVAQAIKDGADVRG 435
K ++ PI +TENG M DE ++ ++D R RY + +L A + I++G ++G
Sbjct: 350 KDFSKGLPILITENGAAMRDE-----LVNGQIEDTGRQRYIEEHLKACHRFIEEGGQLKG 404
Query: 436 YFVWSLLDNFEWAQGYTKRFGLVYVDYKNGLVRHPKSSAYWFMRFL 481
YFVWS LDNFEWA GY+KRFG+V+++Y+ R PK SA WF + +
Sbjct: 405 YFVWSFLDNFEWAWGYSKRFGIVHINYET-QERTPKQSALWFKQMM 449
>pdb|2JIE|A Chain A, Beta-Glucosidase B From Bacillus Polymyxa Complexed With
2- F-Glucose
Length = 454
Score = 308 bits (790), Expect = 3e-84, Method: Compositional matrix adjust.
Identities = 182/466 (39%), Positives = 265/466 (56%), Gaps = 38/466 (8%)
Query: 24 FPPNFVFGVATSAYQIEGACEEGNRGASIWDDFTHTEGKIIDKSNGDVAVDHYHRYKEDI 83
FP F++G +TS+YQIEG +EG R SIWD F GK+I GDVA DH+H +KED+
Sbjct: 14 FPATFMWGTSTSSYQIEGGTDEGGRTPSIWDTFCQIPGKVIGGDCGDVACDHFHHFKEDV 73
Query: 84 DLIAKLGFDAYRFSISWSRIFPDGLGTKINMEGITFYNNIIDALLQKGIQPYVTLYHWDL 143
L+ +LGF YRFS++W RI P IN EG+ FY +++D + G+ P +TLYHWDL
Sbjct: 74 QLMKQLGFLHYRFSVAWPRIMP--AAGIINEEGLLFYEHLLDEIELAGLIPMLTLYHWDL 131
Query: 144 PLHLHESMGGWLNKEIVKYFEIYADTCFASFGDRVKNWITINEPLQTAVNGYCTGIFAPG 203
P + E GGW +E +++F+ YA FG+R+ W TINEP ++ GY TG APG
Sbjct: 132 PQWI-EDEGGWTQRETIQHFKTYASVIMDRFGERINWWNTINEPYCASILGYGTGEHAPG 190
Query: 204 RHQHSSTEPYLVAHHQILAHAAAFSVYQRKYKDKQGGNIGLVVDCEWAEANSDKIEDKSA 263
+ E + AHH ++ H A ++++ K G IG+ ++ E +A S++ ED +A
Sbjct: 191 --HENWREAFTAAHHILMCHGIASNLHKEK---GLTGKIGITLNMEHVDAASERPEDVAA 245
Query: 264 AARRLDFQIGWYLHPIYYGDYPEVMRNNLGDQLP--KFMQK-DKELVRNSLDFVGLNHYT 320
A RR F W+ P++ G YPE M G L F+Q D EL++ DF+G+N+YT
Sbjct: 246 AIRRDGFINRWFAEPLFNGKYPEDMVEWYGTYLNGLDFVQPGDMELIQQPGDFLGINYYT 305
Query: 321 SRFIAHATKSPEEGSFYEAQE--MERLVEWEGGEVIGEKAASEWLYVVPWGLRKVLNYIA 378
I +S + S + ++ ME V G E + P K+L I
Sbjct: 306 RSII----RSTNDASLLQVEQVHMEEPVTDMGWE------------IHPESFYKLLTRIE 349
Query: 379 KTYNNP-PIYVTENG--MDDEENDSSPLHEMLDDKLRVRYFKGYLSAVAQAIKDGADVRG 435
K ++ PI +TENG M DE ++ ++D R Y + +L A + I++G ++G
Sbjct: 350 KDFSKGLPILITENGAAMRDE-----LVNGQIEDTGRHGYIEEHLKACHRFIEEGGQLKG 404
Query: 436 YFVWSLLDNFEWAQGYTKRFGLVYVDYKNGLVRHPKSSAYWFMRFL 481
YFVWS LDNFEWA GY+KRFG+V+++Y+ R PK SA WF + +
Sbjct: 405 YFVWSFLDNFEWAWGYSKRFGIVHINYET-QERTPKQSALWFKQMM 449
>pdb|1UG6|A Chain A, Structure Of Beta-Glucosidase At Atomic Resolution From
Thermus Thermophilus Hb8
Length = 431
Score = 280 bits (716), Expect = 1e-75, Method: Compositional matrix adjust.
Identities = 182/458 (39%), Positives = 248/458 (54%), Gaps = 49/458 (10%)
Query: 27 NFVFGVATSAYQIEGACEEGNRGASIWDDFTHTEGKIIDKSNGDVAVDHYHRYKEDIDLI 86
F++GVATSAYQIEGA +E RG SIWD F G I D S G+ A DHY RY+EDI L+
Sbjct: 7 KFLWGVATSAYQIEGATQEDGRGPSIWDAFAQRPGAIRDGSTGEPACDHYRRYEEDIALM 66
Query: 87 AKLGFDAYRFSISWSRIFPDGLGTKINMEGITFYNNIIDALLQKGIQPYVTLYHWDLPLH 146
LG AYRFS++W RI P+G G +IN +G+ FY+ ++D LL GI P++TLYHWDLPL
Sbjct: 67 QSLGVRAYRFSVAWPRILPEGRG-RINPKGLAFYDRLVDRLLASGITPFLTLYHWDLPLA 125
Query: 147 LHESMGGWLNKEIVKYFEIYADTCFASFGDRVKNWITINEPLQTAVNGYCTGIFAPGRHQ 206
L E GGW ++E F YA+ + DRV + T+NEP +A G+ TG APG
Sbjct: 126 LEER-GGWRSRETAFAFAEYAEAVARALADRVPFFATLNEPWCSAFLGHWTGEHAPGLRN 184
Query: 207 HSSTEPYLVAHHQILAHAAAFSVYQRKYKDKQGGNIGLVVDCEWAEANSDKIEDKSAAAR 266
+ AHH +L H A + +G+V++ +A A + E A R
Sbjct: 185 LEAA--LRAAHHLLLGHGLAVEA----LRAAGARRVGIVLN--FAPAYGEDPEAVDVADR 236
Query: 267 RLDFQIGWYLHPIYYGDYPEVMRNNLGDQLP-KFMQKDKELVRNSLDFVGLNHYTSRFIA 325
+ ++L PI YPE + D P + +D ELV LDF+G+N+Y +A
Sbjct: 237 ---YHNRFFLDPILGKGYPE---SPFRDPPPVPILSRDLELVARPLDFLGVNYYAPVRVA 290
Query: 326 HATKS------PEEGSFYEAQEMERLVEWEGGEVIGEKAASEWLYVVPWGLRKVLNYIAK 379
T + P EG A M WE V P GL +L + +
Sbjct: 291 PGTGTLPVRYLPPEGP---ATAM----GWE---------------VYPEGLYHLLKRLGR 328
Query: 380 TYNNPPIYVTENGMDDEENDSSPLHEMLDDKLRVRYFKGYLSAVAQAIKDGADVRGYFVW 439
P+YVTENG + + +++D RV Y + ++ A +A ++G D+RGYFVW
Sbjct: 329 EVPW-PLYVTENGAAYPDLWTG--EAVVEDPERVAYLEAHVEAALRAREEGVDLRGYFVW 385
Query: 440 SLLDNFEWAQGYTKRFGLVYVDYKNGLVRHPKSSAYWF 477
SL+DNFEWA GYT+RFGL YVD+ + R PK SA W+
Sbjct: 386 SLMDNFEWAFGYTRRFGLYYVDFPSQR-RIPKRSALWY 422
>pdb|3ZJK|A Chain A, Crystal Structure Of Ttb-gly F401s Mutant
pdb|3ZJK|B Chain B, Crystal Structure Of Ttb-gly F401s Mutant
pdb|3ZJK|C Chain C, Crystal Structure Of Ttb-gly F401s Mutant
Length = 431
Score = 277 bits (709), Expect = 8e-75, Method: Compositional matrix adjust.
Identities = 181/458 (39%), Positives = 247/458 (53%), Gaps = 49/458 (10%)
Query: 27 NFVFGVATSAYQIEGACEEGNRGASIWDDFTHTEGKIIDKSNGDVAVDHYHRYKEDIDLI 86
F++GVATSAYQIEGA +E RG SIWD F G I D S G+ A DHY RY+EDI L+
Sbjct: 7 KFLWGVATSAYQIEGATQEDGRGPSIWDAFAQRPGAIRDGSTGEPACDHYRRYEEDIALM 66
Query: 87 AKLGFDAYRFSISWSRIFPDGLGTKINMEGITFYNNIIDALLQKGIQPYVTLYHWDLPLH 146
LG AYRFS++W RI P+G G +IN +G+ FY+ ++D LL GI P++TLYHWDLPL
Sbjct: 67 QSLGVRAYRFSVAWPRILPEGRG-RINPKGLAFYDRLVDRLLASGITPFLTLYHWDLPLA 125
Query: 147 LHESMGGWLNKEIVKYFEIYADTCFASFGDRVKNWITINEPLQTAVNGYCTGIFAPGRHQ 206
L E GGW ++E F YA+ + DRV + T+NEP +A G+ TG APG
Sbjct: 126 LEER-GGWRSRETAFAFAEYAEAVARALADRVPFFATLNEPWCSAFLGHWTGEHAPGLRN 184
Query: 207 HSSTEPYLVAHHQILAHAAAFSVYQRKYKDKQGGNIGLVVDCEWAEANSDKIEDKSAAAR 266
+ AHH +L H A + +G+V++ +A A + E A R
Sbjct: 185 LEAA--LRAAHHLLLGHGLAVEA----LRAAGARRVGIVLN--FAPAYGEDPEAVDVADR 236
Query: 267 RLDFQIGWYLHPIYYGDYPEVMRNNLGDQLP-KFMQKDKELVRNSLDFVGLNHYTSRFIA 325
+ ++L PI YPE + D P + +D ELV LDF+G+N+Y +A
Sbjct: 237 ---YHNRFFLDPILGKGYPE---SPFRDPPPVPILSRDLELVARPLDFLGVNYYAPVRVA 290
Query: 326 HATKS------PEEGSFYEAQEMERLVEWEGGEVIGEKAASEWLYVVPWGLRKVLNYIAK 379
T + P EG A M WE V P GL +L + +
Sbjct: 291 PGTGTLPVRYLPPEGP---ATAM----GWE---------------VYPEGLHHLLKRLGR 328
Query: 380 TYNNPPIYVTENGMDDEENDSSPLHEMLDDKLRVRYFKGYLSAVAQAIKDGADVRGYFVW 439
P+YVTENG + + +++D RV Y + ++ A +A ++G D+RGYFVW
Sbjct: 329 EVPW-PLYVTENGAAYPDLWTG--EAVVEDPERVAYLEAHVEAALRAREEGVDLRGYFVW 385
Query: 440 SLLDNFEWAQGYTKRFGLVYVDYKNGLVRHPKSSAYWF 477
SL+DNFEWA GYT+R GL YVD+ + R PK SA W+
Sbjct: 386 SLMDNFEWAFGYTRRSGLYYVDFPSQR-RIPKRSALWY 422
>pdb|1NP2|A Chain A, Crystal Structure Of Thermostable Beta-Glycosidase From
Thermophilic Eubacterium Thermus Nonproteolyticus Hg102
pdb|1NP2|B Chain B, Crystal Structure Of Thermostable Beta-Glycosidase From
Thermophilic Eubacterium Thermus Nonproteolyticus Hg102
Length = 436
Score = 276 bits (706), Expect = 2e-74, Method: Compositional matrix adjust.
Identities = 174/452 (38%), Positives = 245/452 (54%), Gaps = 37/452 (8%)
Query: 27 NFVFGVATSAYQIEGACEEGNRGASIWDDFTHTEGKIIDKSNGDVAVDHYHRYKEDIDLI 86
F++GVATSAYQIEGA +E RG SIWD F G I D S G+ A DHYHRY+EDI L+
Sbjct: 7 KFLWGVATSAYQIEGATQEDGRGPSIWDTFARRPGAIRDGSTGEPACDHYHRYEEDIALM 66
Query: 87 AKLGFDAYRFSISWSRIFPDGLGTKINMEGITFYNNIIDALLQKGIQPYVTLYHWDLPLH 146
LG YRFS++W RI P+G G +IN +G+ FY+ ++D LL GI P++TLYHWDLP
Sbjct: 67 QSLGVGVYRFSVAWPRILPEGRG-RINPKGLAFYDRLVDRLLAAGITPFLTLYHWDLPQA 125
Query: 147 LHESMGGWLNKEIVKYFEIYADTCFASFGDRVKNWITINEPLQTAVNGYCTGIFAPGRHQ 206
L E GGW ++E F YA+ + DRV + T+NEP +A G+ TG APG
Sbjct: 126 L-EDRGGWRSRETAFAFAEYAEAVARALADRVPFFATLNEPWCSAFLGHWTGEHAPGLRN 184
Query: 207 HSSTEPYLVAHHQILAHAAAFSVYQRKYKDKQGGNIGLVVDCEWAEANSDKIEDKSAAAR 266
+ AHH +L H A + + +G+V++ +A A + E A R
Sbjct: 185 LEAA--LRAAHHLLLGHGLAVEALRAAGARR----VGIVLN--FAPAYGEDPEAVDVADR 236
Query: 267 RLDFQIGWYLHPIYYGDYPEVMRNNLGDQLP-KFMQKDKELVRNSLDFVGLNHYTSRFIA 325
+ ++L PI YPE + D P + +D E + LDF+G+N+Y +A
Sbjct: 237 ---YHNRYFLDPILGRGYPE---SPFQDPPPAPILSRDLEAIARPLDFLGVNYYAPVRVA 290
Query: 326 HATKSPEEGSFYEAQEMERLVEWEGGEVIGEKAASEWLYVVPWGLRKVLNYIAKTYNNPP 385
T P + + + WE V P GL +L + + P
Sbjct: 291 PGT-GPLPVRYLPPEGPVTAMGWE---------------VYPEGLYHLLKRLGREVPW-P 333
Query: 386 IYVTENGMDDEENDSSPLHEMLDDKLRVRYFKGYLSAVAQAIKDGADVRGYFVWSLLDNF 445
+Y+TENG + + +++D RV Y + ++ A +A ++G D+RGYFVWSL+DNF
Sbjct: 334 LYITENGAAYPDLWTG--EAVVEDPERVAYLEAHVEAALRAREEGVDLRGYFVWSLMDNF 391
Query: 446 EWAQGYTKRFGLVYVDYKNGLVRHPKSSAYWF 477
EWA GYT+RFGL YVD+ + R PK SA W+
Sbjct: 392 EWAFGYTRRFGLYYVDFPSQR-RIPKRSALWY 422
>pdb|1VFF|A Chain A, Beta-Glycosidase From Pyrococcus Horikoshii
Length = 423
Score = 213 bits (541), Expect = 3e-55, Method: Compositional matrix adjust.
Identities = 159/455 (34%), Positives = 237/455 (52%), Gaps = 65/455 (14%)
Query: 24 FPPNFVFGVATSAYQIEGACEEGNRGASIWDDFTHTE--GKIIDKSNGDVAVDHYHRYKE 81
FP F+FG ATS++QIEG NR W+D+ + E GK+ +S A +H+ Y++
Sbjct: 5 FPEMFLFGTATSSHQIEG----NNR----WNDWWYYEQIGKLPYRSGK--ACNHWELYRD 54
Query: 82 DIDLIAKLGFDAYRFSISWSRIFPDGLGTKINMEGITFYNNIIDALLQKGIQPYVTLYHW 141
DI L+ LG++AYRFSI WSR+FP+ K N + Y IID LL +GI P VTL+H+
Sbjct: 55 DIQLMTSLGYNAYRFSIEWSRLFPEE--NKFNEDAFMKYREIIDLLLTRGITPLVTLHHF 112
Query: 142 DLPLHLHESMGGWLNKEIVKYFEIYADTCFASFGDRVKNWITINEPLQTAVNGYCTGIFA 201
PL + GG+L +E +K++E Y + A ++VK T NEP+ + GY T +
Sbjct: 113 TSPLWFMKK-GGFLREENLKHWEKYIEKV-AELLEKVKLVATFNEPMVYVMMGYLTAYWP 170
Query: 202 PGRHQHSSTEPYLVAHHQILAHAAAFSVYQRKYKDKQGGNIGLVVDCEWAEANSDKIEDK 261
P S + + VA + + AHA A+ + K+K +G+V + SDK D+
Sbjct: 171 P--FIRSPFKAFKVAANLLKAHAIAYELLHGKFK------VGIVKNIPIILPASDKERDR 222
Query: 262 SAAARRLDFQIGW-YLHPIYYGDYPEVMRNNLGDQLPKFMQKDKELVRNSLDFVGLNHYT 320
AA + D W +L I+ G Y V K + ++ DF+G+N+YT
Sbjct: 223 KAA-EKADNLFNWHFLDAIWSGKYRGVF-------------KTYRIPQSDADFIGVNYYT 268
Query: 321 SRFIAHATKSPEEGSFYEAQEMERLVEWEGGEVIGEKAASEWLYVVPWGLRKVLNYIAKT 380
+ + H T +P + F+E + + I E+ V P G+ L ++
Sbjct: 269 ASEVRH-TWNPLK-FFFEVKLAD----------ISERKTQMGWSVYPKGIYMALKKASRY 316
Query: 381 YNNPPIYVTENGMDDEENDSSPLHEMLDDKLRVRYFKGYLSAVAQAIKDGADVRGYFVWS 440
P+Y+TENG+ LDD+ RV + +L V +AI+DG DVRGYF WS
Sbjct: 317 --GRPLYITENGI-----------ATLDDEWRVEFIIQHLQYVHKAIEDGLDVRGYFYWS 363
Query: 441 LLDNFEWAQGYTKRFGLVYVDYKNGLVRHPKSSAY 475
+DN+EW +G+ RFGLV VDY+ R P+ SAY
Sbjct: 364 FMDNYEWKEGFGPRFGLVEVDYQT-FERRPRKSAY 397
>pdb|1PBG|A Chain A, The Three-Dimensional Structure Of 6-Phospho-Beta
Galactosidase From Lactococcus Lactis
pdb|1PBG|B Chain B, The Three-Dimensional Structure Of 6-Phospho-Beta
Galactosidase From Lactococcus Lactis
pdb|3PBG|A Chain A, 6-Phospho-Beta-Galactosidase Form-C
pdb|3PBG|B Chain B, 6-Phospho-Beta-Galactosidase Form-C
Length = 468
Score = 204 bits (520), Expect = 7e-53, Method: Compositional matrix adjust.
Identities = 154/485 (31%), Positives = 245/485 (50%), Gaps = 47/485 (9%)
Query: 19 VSKTDFPPNFVFGVATSAYQIEGACEEGNRGASIWDDFTHTEGKIIDKSNGDVAVDHYHR 78
++KT P +F+FG AT+AYQ EGA +G WD + + A D YH+
Sbjct: 1 MTKT-LPKDFIFGGATAAYQAEGATHTDGKGPVAWDKYLEDNYWY----TAEPASDFYHK 55
Query: 79 YKEDIDLIAKLGFDAYRFSISWSRIFPDGLGTKINMEGITFYNNIIDALLQKGIQPYVTL 138
Y D++L + G + R SI+WSRIFP G G ++N +G+ FY+ + ++ ++P+VTL
Sbjct: 56 YPVDLELAEEYGVNGIRISIAWSRIFPTGYG-EVNEKGVEFYHKLFAECHKRHVEPFVTL 114
Query: 139 YHWDLPLHLHESMGGWLNKEIVKYFEIYADTCFASFGDRVKNWITINEPLQTAVNGYCTG 198
+H+D P LH S G +LN+E +++F YA CF F + V W T NE Y G
Sbjct: 115 HHFDTPEALH-SNGDFLNRENIEHFIDYAAFCFEEFPE-VNYWTTFNEIGPIGDGQYLVG 172
Query: 199 IFAPGRHQHSSTEPYLVAHHQILAHAAAFSVYQRK-YKDKQGGNIGLVVDCEWAEANSDK 257
F PG ++ + + H+ +++HA A +Y+ K YK + G L + N
Sbjct: 173 KFPPGI-KYDLAKVFQSHHNMMVSHARAVKLYKDKGYKGEIGVVHALPTKYPYDPENP-- 229
Query: 258 IEDKSAAARRLDFQIGWYLHPIYYGDYP----EVMRNNLGDQLPKFMQKDKEL-----VR 308
D AA + L Y G Y E + + L + + +D++ +
Sbjct: 230 -ADVRAAELEDIIHNKFILDATYLGHYSDKTMEGVNHILAENGGELDLRDEDFQALDAAK 288
Query: 309 NSLDFVGLNHYTSRF---------IAHATKSPEEGSFYEAQEMERLVEWEGGEVIGEKAA 359
+ DF+G+N+Y S + I H K + S Y+ + + R V
Sbjct: 289 DLNDFLGINYYMSDWMQAFDGETEIIHNGKGEKGSSKYQIKGVGRRV------APDYVPR 342
Query: 360 SEWLYVV-PWGLRKVLNYIAKTYNN-PPIYVTENGM--DDEENDSSPLHEMLDDKLRVRY 415
++W +++ P GL + + Y N IY+TENG+ DE D++ + D R+ Y
Sbjct: 343 TDWDWIIYPEGLYDQIMRVKNDYPNYKKIYITENGLGYKDEFVDNT-----VYDDGRIDY 397
Query: 416 FKGYLSAVAQAIKDGADVRGYFVWSLLDNFEWAQGYTKRFGLVYVDYKNGLVRHPKSSAY 475
K +L ++ AI DGA+V+GYF+WSL+D F W+ GY KR+GL YVD+ + R+PK SA+
Sbjct: 398 VKQHLEVLSDAIADGANVKGYFIWSLMDVFSWSNGYEKRYGLFYVDF-DTQERYPKKSAH 456
Query: 476 WFMRF 480
W+ +
Sbjct: 457 WYKKL 461
>pdb|2PBG|A Chain A, 6-Phospho-Beta-D-Galactosidase Form-B
Length = 468
Score = 204 bits (518), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 154/485 (31%), Positives = 245/485 (50%), Gaps = 47/485 (9%)
Query: 19 VSKTDFPPNFVFGVATSAYQIEGACEEGNRGASIWDDFTHTEGKIIDKSNGDVAVDHYHR 78
++KT P +F+FG AT+AYQ EGA +G WD + + A D YH+
Sbjct: 1 MTKT-LPKDFIFGGATAAYQAEGATHTDGKGPVAWDKYLEDNYWY----TAEPASDFYHK 55
Query: 79 YKEDIDLIAKLGFDAYRFSISWSRIFPDGLGTKINMEGITFYNNIIDALLQKGIQPYVTL 138
Y D++L + G + R SI+WSRIFP G G ++N +G+ FY+ + ++ ++P+VTL
Sbjct: 56 YPVDLELAEEYGVNGIRISIAWSRIFPTGYG-EVNEKGVEFYHKLFAECHKRHVEPFVTL 114
Query: 139 YHWDLPLHLHESMGGWLNKEIVKYFEIYADTCFASFGDRVKNWITINEPLQTAVNGYCTG 198
+H+D P LH S G +LN+E +++F YA CF F + V W T NE Y G
Sbjct: 115 HHFDTPEALH-SNGDFLNRENIEHFIDYAAFCFEEFPE-VNYWTTFNEIGPIGDGQYLVG 172
Query: 199 IFAPGRHQHSSTEPYLVAHHQILAHAAAFSVYQRK-YKDKQGGNIGLVVDCEWAEANSDK 257
F PG ++ + + H+ +++HA A +Y+ K YK + G L + N
Sbjct: 173 KFPPGI-KYDLAKVFQSHHNMMVSHARAVKLYKDKGYKGEIGVVHALPTKYPYDPENP-- 229
Query: 258 IEDKSAAARRLDFQIGWYLHPIYYGDYP----EVMRNNLGDQLPKFMQKDKEL-----VR 308
D AA + L Y G Y E + + L + + +D++ +
Sbjct: 230 -ADVRAAELEDIIHNKFILDATYLGHYCDKTMEGVNHILAENGGELDLRDEDFQALDAAK 288
Query: 309 NSLDFVGLNHYTSRF---------IAHATKSPEEGSFYEAQEMERLVEWEGGEVIGEKAA 359
+ DF+G+N+Y S + I H K + S Y+ + + R V
Sbjct: 289 DLNDFLGINYYMSDWMQAFDGETEIIHNGKGEKGSSKYQIKGVGRRV------APDYVPR 342
Query: 360 SEWLYVV-PWGLRKVLNYIAKTYNN-PPIYVTENGM--DDEENDSSPLHEMLDDKLRVRY 415
++W +++ P GL + + Y N IY+TENG+ DE D++ + D R+ Y
Sbjct: 343 TDWDWIIYPEGLYDQIMRVKNDYPNYKKIYITENGLGYKDEFVDNT-----VYDDGRIDY 397
Query: 416 FKGYLSAVAQAIKDGADVRGYFVWSLLDNFEWAQGYTKRFGLVYVDYKNGLVRHPKSSAY 475
K +L ++ AI DGA+V+GYF+WSL+D F W+ GY KR+GL YVD+ + R+PK SA+
Sbjct: 398 VKQHLEVLSDAIADGANVKGYFIWSLMDVFSWSNGYEKRYGLFYVDF-DTQERYPKKSAH 456
Query: 476 WFMRF 480
W+ +
Sbjct: 457 WYKKL 461
>pdb|4PBG|A Chain A, 6-Phospho-Beta-Galactosidase Form-Cst
pdb|4PBG|B Chain B, 6-Phospho-Beta-Galactosidase Form-Cst
Length = 468
Score = 201 bits (512), Expect = 6e-52, Method: Compositional matrix adjust.
Identities = 153/485 (31%), Positives = 245/485 (50%), Gaps = 47/485 (9%)
Query: 19 VSKTDFPPNFVFGVATSAYQIEGACEEGNRGASIWDDFTHTEGKIIDKSNGDVAVDHYHR 78
++KT P +F+FG AT+AYQ EGA +G WD + + A D YH+
Sbjct: 1 MTKT-LPKDFIFGGATAAYQAEGATHTDGKGPVAWDKYLEDNYWY----TAEPASDFYHK 55
Query: 79 YKEDIDLIAKLGFDAYRFSISWSRIFPDGLGTKINMEGITFYNNIIDALLQKGIQPYVTL 138
Y D++L + G + R SI+WSRIFP G G ++N +G+ FY+ + ++ ++P+VTL
Sbjct: 56 YPVDLELAEEYGVNGIRISIAWSRIFPTGYG-EVNEKGVEFYHKLFAECHKRHVEPFVTL 114
Query: 139 YHWDLPLHLHESMGGWLNKEIVKYFEIYADTCFASFGDRVKNWITINEPLQTAVNGYCTG 198
+H+D P LH S G +LN+E +++F YA CF F + V W T NE Y G
Sbjct: 115 HHFDTPEALH-SNGDFLNRENIEHFIDYAAFCFEEFPE-VNYWTTFNEIGPIGDGQYLVG 172
Query: 199 IFAPGRHQHSSTEPYLVAHHQILAHAAAFSVYQRK-YKDKQGGNIGLVVDCEWAEANSDK 257
F PG ++ + + H+ +++HA A +Y+ K YK + G L + N
Sbjct: 173 KFPPGI-KYDLAKVFQSHHNMMVSHARAVKLYKDKGYKGEIGVVHALPTKYPYDPENP-- 229
Query: 258 IEDKSAAARRLDFQIGWYLHPIYYGDYP----EVMRNNLGDQLPKFMQKDKEL-----VR 308
D AA + L Y G Y E + + L + + +D++ +
Sbjct: 230 -ADVRAAELEDIIHNKFILDATYLGHYSDKTMEGVNHILAENGGELDLRDEDFQALDAAK 288
Query: 309 NSLDFVGLNHYTSRF---------IAHATKSPEEGSFYEAQEMERLVEWEGGEVIGEKAA 359
+ DF+G+N+Y S + I H K + S Y+ + + R V +
Sbjct: 289 DLNDFLGINYYMSDWMQAFDGETEIIHNGKGEKGSSKYQIKGVGRRVAPD------YVPR 342
Query: 360 SEWLYVV-PWGLRKVLNYIAKTYNN-PPIYVTENGM--DDEENDSSPLHEMLDDKLRVRY 415
++W +++ P GL + + Y N IY+T NG+ DE D++ + D R+ Y
Sbjct: 343 TDWDWIIYPEGLYDQIMRVKNDYPNYKKIYITCNGLGYKDEFVDNT-----VYDDGRIDY 397
Query: 416 FKGYLSAVAQAIKDGADVRGYFVWSLLDNFEWAQGYTKRFGLVYVDYKNGLVRHPKSSAY 475
K +L ++ AI DGA+V+GYF+WSL+D F W+ GY KR+GL YVD+ + R+PK SA+
Sbjct: 398 VKQHLEVLSDAIADGANVKGYFIWSLMDVFSWSNGYEKRYGLFYVDF-DTQERYPKKSAH 456
Query: 476 WFMRF 480
W+ +
Sbjct: 457 WYKKL 461
>pdb|4B3K|A Chain A, Family 1 6-phospho-beta-d Glycosidase From Streptococcus
Pyogenes
pdb|4B3K|B Chain B, Family 1 6-phospho-beta-d Glycosidase From Streptococcus
Pyogenes
pdb|4B3K|C Chain C, Family 1 6-phospho-beta-d Glycosidase From Streptococcus
Pyogenes
pdb|4B3K|D Chain D, Family 1 6-phospho-beta-d Glycosidase From Streptococcus
Pyogenes
pdb|4B3K|E Chain E, Family 1 6-phospho-beta-d Glycosidase From Streptococcus
Pyogenes
pdb|4B3K|F Chain F, Family 1 6-phospho-beta-d Glycosidase From Streptococcus
Pyogenes
pdb|4B3L|A Chain A, Family 1 6-phospho-beta-d Glycosidase From Streptococcus
Pyogenes
pdb|4B3L|B Chain B, Family 1 6-phospho-beta-d Glycosidase From Streptococcus
Pyogenes
pdb|4B3L|C Chain C, Family 1 6-phospho-beta-d Glycosidase From Streptococcus
Pyogenes
pdb|4B3L|D Chain D, Family 1 6-phospho-beta-d Glycosidase From Streptococcus
Pyogenes
pdb|4B3L|E Chain E, Family 1 6-phospho-beta-d Glycosidase From Streptococcus
Pyogenes
pdb|4B3L|F Chain F, Family 1 6-phospho-beta-d Glycosidase From Streptococcus
Pyogenes
Length = 479
Score = 199 bits (505), Expect = 4e-51, Method: Compositional matrix adjust.
Identities = 137/481 (28%), Positives = 223/481 (46%), Gaps = 54/481 (11%)
Query: 24 FPPNFVFGVATSAYQIEGACEEGNRGASIWDDFTHTEGKII-DKSNGDVAVDHYHRYKED 82
FP F +G ATS Q EG + +R +++D + E + D D A D YH+ + D
Sbjct: 3 FPKEFWWGGATSGPQSEGRFAKQHR--NLFDYWYEEEPDLFYDYVGPDTASDAYHQIESD 60
Query: 83 IDLIAKLGFDAYRFSISWSRIFPDGLGTKINMEGITFYNNIIDALLQKGIQPYVTLYHWD 142
+ L+A LG ++YR SI W+R+ D IN +G+ +YN +IDA L GI+P + L+H+D
Sbjct: 61 LTLLASLGHNSYRTSIQWTRLIDDFEQATINPDGLAYYNRVIDACLANGIRPVINLHHFD 120
Query: 143 LPLHLHESMGGWLNKEIVKYFEIYADTCFASFGDRVKNWITINEPLQTAVNGYCTGIFAP 202
LP+ L+++ GGW +K +V F ++ CF FGDRVK+W NEP+ Y P
Sbjct: 121 LPIALYQAYGGWESKHVVDLFVAFSKVCFEQFGDRVKDWFVHNEPMVVVEGSYLMQFHYP 180
Query: 203 GRHQHSSTEPYLVAHHQILAHAAAFSVYQRKYKDKQGGNIGLVVDCEWAEANSDKIEDKS 262
+ VA++ LA A Y+R + G IG +++ A S D +
Sbjct: 181 A--IVDGKKAVQVAYNLALATAKVIQAYRRGPAELSDGRIGTILNLTPAYPASQSEADMA 238
Query: 263 AAARRLDFQIGWYLHPIYYGDYPEVMRNNLGDQLPKFMQKDKEL---VRNSLDFVGLNHY 319
AA + ++ +G +PE + L + +EL N +D++GLN Y
Sbjct: 239 AAHFAELWNNDLFMEAAVHGKFPEELVAVLKKDGVLWQSTPEELALIAENRVDYLGLNFY 298
Query: 320 TSRFIAHATKSPEEGSFYEAQEMERLVEWEGGEVIGEKAASEWLY--------------- 364
+ + P VI + EW Y
Sbjct: 299 HPKRVKAPDAIP---------------------VISPSWSPEWYYDPYLMPGRRMNVDKG 337
Query: 365 --VVPWGLRKVLNYIAKTYNNPPIYVTENGM----DDEENDSSPLHEMLDDKLRVRYFKG 418
+ P + + + Y+N P +++ENG+ +D D + + D R+++ K
Sbjct: 338 WEIYPEAVYDIAIKMRDHYDNIPWFLSENGVGISGEDRYRDET---GQIQDDYRIQFLKE 394
Query: 419 YLSAVAQAIKDGADVRGYFVWSLLDNFEWAQGYTKRFGLVYVDYKNGLVRHPKSSAYWFM 478
+L+ + + I+ G++ GY VW+ +D + W Y R+GLV + VR PK+SAYWF
Sbjct: 395 HLTYLHKGIEAGSNCFGYHVWTPIDGWSWLNAYKNRYGLVENNIHTQ-VRRPKASAYWFK 453
Query: 479 R 479
+
Sbjct: 454 K 454
>pdb|2XHY|A Chain A, Crystal Structure Of E.Coli Bgla
pdb|2XHY|B Chain B, Crystal Structure Of E.Coli Bgla
pdb|2XHY|C Chain C, Crystal Structure Of E.Coli Bgla
pdb|2XHY|D Chain D, Crystal Structure Of E.Coli Bgla
Length = 479
Score = 198 bits (503), Expect = 6e-51, Method: Compositional matrix adjust.
Identities = 143/489 (29%), Positives = 235/489 (48%), Gaps = 53/489 (10%)
Query: 19 VSKTDFPPNFVFGVATSAYQIEGACEEGNRGASIWDDFTHTEGKIIDKSNGDV------- 71
V K P +F++G A +A+Q+EG +G +G SI D T + + +V
Sbjct: 3 VKKLTLPKDFLWGGAVAAHQVEGGWNKGGKGPSICDVLTGGAHGVPREITKEVLPGKYYP 62
Query: 72 ---AVDHYHRYKEDIDLIAKLGFDAYRFSISWSRIFPDGLGTKINMEGITFYNNIIDALL 128
AVD Y YKEDI L A++GF +R SI+W+RIFP G + N EG+ FY+++ D LL
Sbjct: 63 NHEAVDFYGHYKEDIKLFAEMGFKCFRTSIAWTRIFPKGDEAQPNEEGLKFYDDMFDELL 122
Query: 129 QKGIQPYVTLYHWDLPLHLHESMGGWLNKEIVKYFEIYADTCFASFGDRVKNWITINE-- 186
+ I+P +TL H+++PLHL + G W N+++V +F +A+ F + +VK W+T NE
Sbjct: 123 KYNIEPVITLSHFEMPLHLVQQYGSWTNRKVVDFFVRFAEVVFERYKHKVKYWMTFNEIN 182
Query: 187 ---PLQTAVNGYCTGIFAPGRHQHSSTEPYLVAHHQILAHAAAFSVYQRKYKDKQGGNIG 243
+ + GYC H++ Y V HHQ +A A A +R + + G +
Sbjct: 183 NQRNWRAPLFGYCCSGVVYTEHENPEETMYQVLHHQFVASALAVKAARRINPEMKVGCML 242
Query: 244 LVVDCEWAEANSDKIEDKSAAARR----LDFQIGWYLHPIYYGDYPEVMRNNLGDQLPKF 299
+V N D + + R D Q+ Y +P Y + E N+ K
Sbjct: 243 AMVPLYPYSCNPDDVMFAQESMRERYVFTDVQLRGY-YPSYVLNEWERRGFNI-----KM 296
Query: 300 MQKDKELVR-NSLDFVGLNHYTSRFIAHATKSPEEGSFYEAQEMERLVEWEGGEVIGEKA 358
D +++R + D++G ++Y + + + + S +E V+
Sbjct: 297 EDGDLDVLREGTCDYLGFSYYMTNAVKAEGGTGDAISGFEGSVPNPYVK----------- 345
Query: 359 ASEWLYVV-PWGLRKVLNYIAKTYNNPPIYVTENGM---DDEENDSSPLHEMLDDKLRVR 414
AS+W + + P GLR L + + Y P+++ ENG D E D S ++D R+
Sbjct: 346 ASDWGWQIDPVGLRYALCELYERYQR-PLFIVENGFGAYDKVEEDGS-----INDDYRID 399
Query: 415 YFKGYLSAVAQAIK-DGADVRGYFVWSLLDNFEWAQG-YTKRFGLVYV----DYKNGLVR 468
Y + ++ + +A+ DG D+ GY W +D + G Y+KR+G +YV D + R
Sbjct: 400 YLRAHIEEMKKAVTYDGVDLMGYTPWGCIDCVSFTTGQYSKRYGFIYVNKHDDGTGDMSR 459
Query: 469 HPKSSAYWF 477
K S W+
Sbjct: 460 SRKKSFNWY 468
>pdb|4F66|A Chain A, The Crystal Structure Of 6-Phospho-Beta-Glucosidase From
Streptococcus Mutans Ua159 In Complex With
Beta-D-Glucose-6-Phosphate.
pdb|4F66|B Chain B, The Crystal Structure Of 6-Phospho-Beta-Glucosidase From
Streptococcus Mutans Ua159 In Complex With
Beta-D-Glucose-6-Phosphate
Length = 480
Score = 195 bits (496), Expect = 4e-50, Method: Compositional matrix adjust.
Identities = 145/487 (29%), Positives = 236/487 (48%), Gaps = 49/487 (10%)
Query: 20 SKTDFPPNFVFGVATSAYQIEGACEEGNRGASIWDDFTHTEGKIIDKSNGDV-------- 71
+ + P NF++G A +A+Q+EG +EG +G S+ D T + + V
Sbjct: 3 AMSKLPENFLWGGAVAAHQLEGGWQEGGKGISVADVMTAGRHGVAREITAGVLEGKYYPN 62
Query: 72 --AVDHYHRYKEDIDLIAKLGFDAYRFSISWSRIFPDGLGTKINMEGITFYNNIIDALLQ 129
A+D YH YKED+ L A++GF +R SI+W+RIFP G + N G+ FY+++ D L+
Sbjct: 63 HEAIDFYHHYKEDVKLFAEMGFKCFRTSIAWTRIFPKGDEAEPNEAGLQFYDDLFDECLK 122
Query: 130 KGIQPYVTLYHWDLPLHLHESMGGWLNKEIVKYFEIYADTCFASFGDRVKNWITINE--- 186
GI+P VTL H++LP HL GG+ N++++ +F +A+ CF + D+VK W+T NE
Sbjct: 123 YGIEPVVTLSHFELPYHLVTEYGGFTNRKVIDFFVHFAEVCFRRYKDKVKYWMTFNEINN 182
Query: 187 --PLQTAVNGYCTGIFAPGRHQHSSTEPYLVAHHQILAHAAAFSVYQRKYKDKQGGNIGL 244
Q + Y AH++++A A A + + G +
Sbjct: 183 QANYQEDFAPFTNSGIVYKEGDDREAIMYQAAHYELVASARAVKIGHAINPNLNIGCMVA 242
Query: 245 VVDCEWAEANSDKIEDKSAAARRLDFQIGWYLHPIYYGDYPEVMRNNLGDQLPK--FMQK 302
+ A N I A ++ + ++H G YPE + + K F ++
Sbjct: 243 MCPIYPATCNPKDILMAQKAMQKRYYFADVHVH----GFYPEHIFKYWERKAIKVDFTER 298
Query: 303 D-KELVRNSLDFVGLNHYTSRFI-AHATKSPEEGSFYEAQEMERLVEWEGGEVIGEKAAS 360
D K+L ++D++G ++Y S I AH +P +Y+ E E LV+ AS
Sbjct: 299 DKKDLFEGTVDYIGFSYYMSFVIDAHRENNP----YYDYLETEDLVKNP------YVKAS 348
Query: 361 EWLYVV-PWGLRKVLNYIAKTYNNPPIYVTENG---MDDEENDSSPLHEMLDDKLRVRYF 416
+W + + P GLR LN+ Y + P+++ ENG +D E D M+ D R+ Y
Sbjct: 349 DWDWQIDPQGLRYALNWFTDMY-HLPLFIVENGFGAIDQVEADG-----MVHDDYRIDYL 402
Query: 417 KGYLSAVAQAI-KDGADVRGYFVWSLLDNFEWAQG-YTKRFGLVYVDY----KNGLVRHP 470
++ + +A+ +DG ++ GY W +D G KR+G +YVD K L R P
Sbjct: 403 GAHIKEMIKAVDEDGVELMGYTPWGCIDLVSAGTGEMRKRYGFIYVDKDDEGKGTLKRSP 462
Query: 471 KSSAYWF 477
K S W+
Sbjct: 463 KLSFNWY 469
>pdb|4F79|A Chain A, The Crystal Structure Of 6-Phospho-Beta-Glucosidase Mutant
(E375q) In Complex With Salicin 6-Phosphate
pdb|4GPN|A Chain A, The Crystal Structure Of 6-P-Beta-D-Glucosidase (E375q
Mutant) From Streptococcus Mutans Ua150 In Complex With
Gentiobiose 6-Phosphate.
pdb|4GPN|B Chain B, The Crystal Structure Of 6-P-Beta-D-Glucosidase (E375q
Mutant) From Streptococcus Mutans Ua150 In Complex With
Gentiobiose 6-Phosphate
Length = 480
Score = 194 bits (493), Expect = 9e-50, Method: Compositional matrix adjust.
Identities = 144/487 (29%), Positives = 236/487 (48%), Gaps = 49/487 (10%)
Query: 20 SKTDFPPNFVFGVATSAYQIEGACEEGNRGASIWDDFTHTEGKIIDKSNGDV-------- 71
+ + P NF++G A +A+Q+EG +EG +G S+ D T + + V
Sbjct: 3 AMSKLPENFLWGGAVAAHQLEGGWQEGGKGISVADVMTAGRHGVAREITAGVLEGKYYPN 62
Query: 72 --AVDHYHRYKEDIDLIAKLGFDAYRFSISWSRIFPDGLGTKINMEGITFYNNIIDALLQ 129
A+D YH YKED+ L A++GF +R SI+W+RIFP G + N G+ FY+++ D L+
Sbjct: 63 HEAIDFYHHYKEDVKLFAEMGFKCFRTSIAWTRIFPKGDEAEPNEAGLQFYDDLFDECLK 122
Query: 130 KGIQPYVTLYHWDLPLHLHESMGGWLNKEIVKYFEIYADTCFASFGDRVKNWITINE--- 186
GI+P VTL H++LP HL GG+ N++++ +F +A+ CF + D+VK W+T NE
Sbjct: 123 YGIEPVVTLSHFELPYHLVTEYGGFTNRKVIDFFVHFAEVCFRRYKDKVKYWMTFNEINN 182
Query: 187 --PLQTAVNGYCTGIFAPGRHQHSSTEPYLVAHHQILAHAAAFSVYQRKYKDKQGGNIGL 244
Q + Y AH++++A A A + + G +
Sbjct: 183 QANYQEDFAPFTNSGIVYKEGDDREAIMYQAAHYELVASARAVKIGHAINPNLNIGCMVA 242
Query: 245 VVDCEWAEANSDKIEDKSAAARRLDFQIGWYLHPIYYGDYPEVMRNNLGDQLPK--FMQK 302
+ A N I A ++ + ++H G YPE + + K F ++
Sbjct: 243 MCPIYPATCNPKDILMAQKAMQKRYYFADVHVH----GFYPEHIFKYWERKAIKVDFTER 298
Query: 303 D-KELVRNSLDFVGLNHYTSRFI-AHATKSPEEGSFYEAQEMERLVEWEGGEVIGEKAAS 360
D K+L ++D++G ++Y S I AH +P +Y+ E E LV+ AS
Sbjct: 299 DKKDLFEGTVDYIGFSYYMSFVIDAHRENNP----YYDYLETEDLVKNP------YVKAS 348
Query: 361 EWLYVV-PWGLRKVLNYIAKTYNNPPIYVTENG---MDDEENDSSPLHEMLDDKLRVRYF 416
+W + + P GLR LN+ Y + P+++ +NG +D E D M+ D R+ Y
Sbjct: 349 DWDWQIDPQGLRYALNWFTDMY-HLPLFIVQNGFGAIDQVEADG-----MVHDDYRIDYL 402
Query: 417 KGYLSAVAQAI-KDGADVRGYFVWSLLDNFEWAQG-YTKRFGLVYVDY----KNGLVRHP 470
++ + +A+ +DG ++ GY W +D G KR+G +YVD K L R P
Sbjct: 403 GAHIKEMIKAVDEDGVELMGYTPWGCIDLVSAGTGEMRKRYGFIYVDKDDEGKGTLKRSP 462
Query: 471 KSSAYWF 477
K S W+
Sbjct: 463 KLSFNWY 469
>pdb|3PN8|A Chain A, The Crystal Structure Of 6-Phospho-Beta-Glucosidase From
Streptococcus Mutans Ua159
pdb|3PN8|B Chain B, The Crystal Structure Of 6-Phospho-Beta-Glucosidase From
Streptococcus Mutans Ua159
Length = 480
Score = 188 bits (478), Expect = 5e-48, Method: Compositional matrix adjust.
Identities = 148/494 (29%), Positives = 235/494 (47%), Gaps = 55/494 (11%)
Query: 20 SKTDFPPNFVFGVATSAYQIEGACEEGNRGASIWDDFTHTEGKIIDKSNGDV-------- 71
+ + P NF++G A +A+Q+EG +EG +G S+ D T + + V
Sbjct: 3 AXSKLPENFLWGGAVAAHQLEGGWQEGGKGISVADVXTAGRHGVAREITAGVLEGKYYPN 62
Query: 72 --AVDHYHRYKEDIDLIAKLGFDAYRFSISWSRIFPDGLGTKINMEGITFYNNIIDALLQ 129
A+D YH YKED+ L A+ GF +R SI+W+RIFP G + N G+ FY+++ D L+
Sbjct: 63 HEAIDFYHHYKEDVKLFAEXGFKCFRTSIAWTRIFPKGDEAEPNEAGLQFYDDLFDECLK 122
Query: 130 KGIQPYVTLYHWDLPLHLHESMGGWLNKEIVKYFEIYADTCFASFGDRVKNWITINE--- 186
GI+P VTL H++LP HL GG+ N++++ +F +A+ CF + D+VK W T NE
Sbjct: 123 YGIEPVVTLSHFELPYHLVTEYGGFTNRKVIDFFVHFAEVCFRRYKDKVKYWXTFNEINN 182
Query: 187 --PLQTAVNGYCTGIFAPGRHQHSSTEPYLVAHHQILAHAAAFSVYQRKYKDKQGGNIGL 244
Q + Y AH++++A A A + + NIG
Sbjct: 183 QANYQEDFAPFTNSGIVYKEGDDREAIXYQAAHYELVASARAVKI---GHAINPNLNIGC 239
Query: 245 -VVDCEW--AEANSDKIEDKSAAARRLDFQIGWYLHPIYYGDYPEVMRNNLGDQLPK--F 299
V C A N I A ++ + ++H G YPE + + K F
Sbjct: 240 XVAXCPIYPATCNPKDILXAQKAXQKRYYFADVHVH----GFYPEHIFKYWERKAIKVDF 295
Query: 300 MQKD-KELVRNSLDFVGLNHYTSRFI-AHATKSPEEGSFYEAQEMERLVEWEGGEVIGEK 357
++D K+L ++D++G ++Y S I AH +P +Y+ E E LV+
Sbjct: 296 TERDKKDLFEGTVDYIGFSYYXSFVIDAHRENNP----YYDYLETEDLVK------NPYV 345
Query: 358 AASEWLYVV-PWGLRKVLNYIAKTYNNPPIYVTENG---MDDEENDSSPLHEMLDDKLRV 413
AS+W + + P GLR LN+ Y + P+++ ENG +D E D + D R+
Sbjct: 346 KASDWDWQIDPQGLRYALNWFTDXY-HLPLFIVENGFGAIDQVEADGX-----VHDDYRI 399
Query: 414 RYFKGYLSAVAQAI-KDGADVRGYFVWSLLDNFEWAQG-YTKRFGLVYVDY----KNGLV 467
Y ++ +A+ +DG ++ GY W +D G KR+G +YVD K L
Sbjct: 400 DYLGAHIKEXIKAVDEDGVELXGYTPWGCIDLVSAGTGEXRKRYGFIYVDKDDEGKGTLK 459
Query: 468 RHPKSSAYWFMRFL 481
R PK S W+ +
Sbjct: 460 RSPKLSFNWYKEVI 473
>pdb|3QOM|A Chain A, Crystal Structure Of 6-Phospho-Beta-Glucosidase From
Lactobacillus Plantarum
pdb|4GZE|A Chain A, Crystal Structure Of 6-phospho-beta-glucosidase From
Lactobacillus Plantarum (apo Form)
pdb|4GZE|B Chain B, Crystal Structure Of 6-phospho-beta-glucosidase From
Lactobacillus Plantarum (apo Form)
pdb|4GZE|C Chain C, Crystal Structure Of 6-phospho-beta-glucosidase From
Lactobacillus Plantarum (apo Form)
pdb|4GZE|D Chain D, Crystal Structure Of 6-phospho-beta-glucosidase From
Lactobacillus Plantarum (apo Form)
pdb|4GZE|E Chain E, Crystal Structure Of 6-phospho-beta-glucosidase From
Lactobacillus Plantarum (apo Form)
pdb|4GZE|F Chain F, Crystal Structure Of 6-phospho-beta-glucosidase From
Lactobacillus Plantarum (apo Form)
Length = 481
Score = 176 bits (445), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 146/492 (29%), Positives = 241/492 (48%), Gaps = 63/492 (12%)
Query: 24 FPPNFVFGVATSAYQIEGACEEGNRGASIWDDFT-HTEGKIIDKSNGDVA---------V 73
FP F++G A +A+Q+EG +EG +G S D T T + + ++G VA +
Sbjct: 11 FPEGFLWGGAVAAHQLEGGYKEGGKGLSTADIXTLGTNERPREITDGVVAGKYYPNHQAI 70
Query: 74 DHYHRYKEDIDLIAKLGFDAYRFSISWSRIFPDGLGTKINMEGITFYNNIIDALLQKGIQ 133
D YHRY EDI+L A+ GF +R SI+W+RIFP+G ++ N G+ FY+++ D L+ GIQ
Sbjct: 71 DFYHRYPEDIELFAEXGFKCFRTSIAWTRIFPNGDESEPNEAGLQFYDDLFDECLKNGIQ 130
Query: 134 PYVTLYHWDLPLHLHESMGGWLNKEIVKYFEIYADTCFASFGDRVKNWITINEPLQTAVN 193
P VTL H++ P HL + GGW N+++++++ +A CF + D+V W T NE + N
Sbjct: 131 PVVTLAHFEXPYHLVKQYGGWRNRKLIQFYLNFAKVCFERYRDKVTYWXTFNE-INNQTN 189
Query: 194 GYCTG--------IFAPGRHQHSSTEPYLVAHHQILAHAAAFSVYQRKYKDKQ-GGNIGL 244
G I PG ++ Y AH++++A AAA + + D Q G I
Sbjct: 190 FESDGAXLTDSGIIHQPGENRERWX--YQAAHYELVASAAAVQLGHQINPDFQIGCXIAX 247
Query: 245 VVDCEWAEANSDKIEDKSAAARRLDFQIGWYLHPIYY-GDYPEVMRNNLGDQ---LPKFM 300
A +D + + A R Y ++ G YP+ +RN + L
Sbjct: 248 CPIYPLTAAPADVLFAQRAXQTRF------YFADVHCNGTYPQWLRNRFESEHFNLDITA 301
Query: 301 QKDKELVRNSLDFVGLNHYTSRFIAHATKSPEEGSFYEAQEMERLVEWEGGEVIGEK--A 358
+ K L ++D++G ++Y S + ++ +L E +++
Sbjct: 302 EDLKILQAGTVDYIGFSYYXS---------------FTVKDTGKLAYNEEHDLVKNPYVK 346
Query: 359 ASEWLYVV-PWGLRKVLNYIAKTYNNPPIYVTENGMD--DEENDSSPLHEMLDDKLRVRY 415
AS+W + V P GLR N+ Y + P+++ ENG+ D++ + +H D R+ Y
Sbjct: 347 ASDWGWQVDPVGLRYAXNWFTDRY-HLPLFIVENGLGAIDKKTADNQIH----DDYRIDY 401
Query: 416 FKGYLSAVAQAI-KDGADVRGYFVWSLLDNFEWAQG-YTKRFGLVYVDYKN----GLVRH 469
+L + A+ +DG D+ GY W +D + G +KR+G +YVD + L R+
Sbjct: 402 LTDHLRQIKLAVLEDGVDLIGYTPWGCIDLVAASTGQXSKRYGFIYVDENDDGSGSLKRY 461
Query: 470 PKSSAYWFMRFL 481
K S WF +
Sbjct: 462 KKDSFTWFQHVI 473
>pdb|3APG|A Chain A, Crystal Structure Of Hyperthermophilic Beta-Glucosidase
From Pyrococcus Furiosus
pdb|3APG|B Chain B, Crystal Structure Of Hyperthermophilic Beta-Glucosidase
From Pyrococcus Furiosus
pdb|3APG|C Chain C, Crystal Structure Of Hyperthermophilic Beta-Glucosidase
From Pyrococcus Furiosus
pdb|3APG|D Chain D, Crystal Structure Of Hyperthermophilic Beta-Glucosidase
From Pyrococcus Furiosus
Length = 473
Score = 161 bits (407), Expect = 8e-40, Method: Compositional matrix adjust.
Identities = 143/492 (29%), Positives = 210/492 (42%), Gaps = 110/492 (22%)
Query: 24 FPPNFVFGVATSAYQIEGACEEGNRGASIWDDFTHTEGKIIDK-SNGDVAVD---HYHRY 79
FP NF+FG + S +Q E G+ S W + H + I +GD+ + ++H Y
Sbjct: 4 FPKNFMFGYSWSGFQFEMGLP-GSEVESDWWVWVHDKENIASGLVSGDLPENGPAYWHLY 62
Query: 80 KEDIDLIAKLGFDAYRFSISWSRIFP------------DGLGTKI--------------- 112
K+D D+ KLG D R I W+RIFP D G I
Sbjct: 63 KQDHDIAEKLGMDCIRGGIEWARIFPKPTFDVKVDVEKDEEGNIISVDVPESTIKELEKI 122
Query: 113 -NMEGITFYNNIIDALLQKGIQPYVTLYHWDLPLHLHESMG-----------GWLNKEIV 160
NME + Y I ++G + LYHW LPL +H+ + GWL+++ V
Sbjct: 123 ANMEALEHYRKIYSDWKERGKTFILNLYHWPLPLWIHDPIAVRKLGPDRAPAGWLDEKTV 182
Query: 161 KYFEIYADTCFASFGDRVKNWITINEPLQTAVNGYCT--GIFAPGRHQHSSTEPYLVAHH 218
F +A D V W T+NEP GY F PG + E +
Sbjct: 183 VEFVKFAAFVAYHLDDLVDMWSTMNEPNVVYNQGYINLRSGFPPGYLSFEAAEK--AKFN 240
Query: 219 QILAHAAAFSVYQRKYKDKQGGNIGLVVDCEWAEANSDKIEDKSAAARRLDFQIGWYLHP 278
I AH A+ ++Y +K ++G++ W + +++ +D+ R+ D++ LH
Sbjct: 241 LIQAHIGAYDAI-KEYSEK---SVGVIYAFAWHDPLAEEYKDEVEEIRKKDYEFVTILHS 296
Query: 279 IYYGDYPEVMRNNLGDQLPKFMQKDKELVRNSLDFVGLNHYTSRFI-----AHATKSPEE 333
+ LD++G+N+Y SR + H P
Sbjct: 297 -----------------------------KGKLDWIGVNYY-SRLVYGAKDGHLVPLPGY 326
Query: 334 GSFYEAQEMERLVEWEGGEVIGEKAASEWLY-VVPWGLRKVLNYIAKTYNNPPIYVTENG 392
G E GG + AS++ + + P GL +L Y+ Y P I +TENG
Sbjct: 327 GFMSE----------RGGFAKSGRPASDFGWEMYPEGLENLLKYLNNAYELPMI-ITENG 375
Query: 393 MDDEENDSSPLHEMLDDKLRVRYFKGYLSAVAQAIKDGADVRGYFVWSLLDNFEWAQGYT 452
M D D+ R Y +L AV A+K+GADVRGY WSL DN+EWAQG+
Sbjct: 376 MADAA-----------DRYRPHYLVSHLKAVYNAMKEGADVRGYLHWSLTDNYEWAQGFR 424
Query: 453 KRFGLVYVDYKN 464
RFGLVYVD++
Sbjct: 425 MRFGLVYVDFET 436
>pdb|1QVB|A Chain A, Crystal Structure Of The Beta-Glycosidase From The
Hyperthermophile Thermosphaera Aggregans
pdb|1QVB|B Chain B, Crystal Structure Of The Beta-Glycosidase From The
Hyperthermophile Thermosphaera Aggregans
Length = 481
Score = 125 bits (314), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 130/489 (26%), Positives = 203/489 (41%), Gaps = 90/489 (18%)
Query: 24 FPPNFVFGVATSAYQIEGA---CEEGNRGASIW-DDFTHTEGKIIDKSNGDVAVDHYHRY 79
FP +F+ G ++S +Q E E+ N +W D +T ++ + +++
Sbjct: 3 FPKDFMIGYSSSPFQFEAGIPGSEDPNSDWWVWVHDPENTAAGLVSGDFPENGPGYWNLN 62
Query: 80 KEDIDLIAKLGFDAYRFSISWSRIFP----------------------------DGLGTK 111
+ D DL KLG + R + WSRIFP + L
Sbjct: 63 QNDHDLAEKLGVNTIRVGVEWSRIFPKPTFNVKVPVERDENGSIVHVDVDDKAVERLDEL 122
Query: 112 INMEGITFYNNIIDALLQKGIQPYVTLYHWDLPLHLHESM-----------GGWLNKEIV 160
N E + Y + +++G + + LYHW LPL LH + GWLN+E V
Sbjct: 123 ANKEAVNHYVEMYKDWVERGRKLILNLYHWPLPLWLHNPIMVRRMGPDRAPSGWLNEESV 182
Query: 161 KYFEIYADTCFASFGDRVKNWITINEPLQTAVNGY--CTGIFAPGRHQHSSTEPYLVAHH 218
F YA G+ W T+NEP GY G F PG + + +
Sbjct: 183 VEFAKYAAYIAWKMGELPVMWSTMNEPNVVYEQGYMFVKGGFPPGYLSLEAADK--ARRN 240
Query: 219 QILAHAAAFSVYQRKYKDKQGGNIGLVVDCEWAEANSDKIE--DKSAAARRLDFQIGWYL 276
I AHA A+ +R K +GL+ +W E E DK +++
Sbjct: 241 MIQAHARAYDNIKRFSKKP----VGLIYAFQWFELLEGPAEVFDKFKSSK---------- 286
Query: 277 HPIYYGDYPEVMRNNLGDQLPKFMQKDKELVRNSLDFVGLNHYTSRFIAHATKSPEEGSF 336
+YY + +++ G + ++ ++L N LD++G+N+Y+ P
Sbjct: 287 --LYY--FTDIVSK--GSSIIN-VEYRRDLA-NRLDWLGVNYYSRLVYKIVDDKPIILHG 338
Query: 337 YEAQEMERLVEWEGGEVIGEKAASEWLY-VVPWGLRKVLNYIAKTYNNPPIYVTENGMDD 395
Y + GG E S++ + V P GL +L + Y I VTENG+ D
Sbjct: 339 YG------FLCTPGGISPAENPCSDFGWEVYPEGLYLLLKELYNRYGVDLI-VTENGVSD 391
Query: 396 EENDSSPLHEMLDDKLRVRYFKGYLSAVAQAIKDGADVRGYFVWSLLDNFEWAQGYTKRF 455
D LR Y ++ +V +A +G V+GY WSL DN+EWAQG+ ++F
Sbjct: 392 SR-----------DALRPAYLVSHVYSVWKAANEGIPVKGYLHWSLTDNYEWAQGFRQKF 440
Query: 456 GLVYVDYKN 464
GLV VD+K
Sbjct: 441 GLVMVDFKT 449
>pdb|4HA3|A Chain A, Structure Of Beta-Glycosidase From Acidilobus
Saccharovorans In Complex With Tris
pdb|4HA4|A Chain A, Structure Of Beta-Glycosidase From Acidilobus
Saccharovorans In Complex With Glycerol
Length = 489
Score = 120 bits (302), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 134/502 (26%), Positives = 197/502 (39%), Gaps = 98/502 (19%)
Query: 24 FPPNFVFGVATSAYQIEGACEEGNRGASIWDDFTHTEGKIIDKSNGDVAVD-------HY 76
FP +F+FG + + +Q E S W + H I + G V+ D ++
Sbjct: 4 FPKDFLFGWSQAGFQSEMGTPGSEDPNSDWYAWVHDRENI---AAGLVSGDFPENGPGYW 60
Query: 77 HRYKEDIDLIAKLGFDAYRFSISWSRIFP---------------------------DGLG 109
Y++ D +G A R + WSRIFP + L
Sbjct: 61 GNYRKFHDAAQAMGLTAARIGVEWSRIFPRPTFDVKVDAEVKGDDVLSVYVSEGALEQLD 120
Query: 110 TKINMEGITFYNNIIDALLQKGIQPYVTLYHWDLPLHLHESMG----------GWLNKEI 159
N + I Y + L +GI + LYHW LPL LH+ + GWL+
Sbjct: 121 KMANRDAINHYREMFSDLRSRGITFILNLYHWPLPLWLHDPIAIRRGNLSAPSGWLDVRT 180
Query: 160 VKYFEIYADTCFASFGDRVKNWITINEPLQTAVNGYCT--GIFAPGRHQHSSTEPYLVAH 217
V F ++ D V + T+NEP GY F PG +
Sbjct: 181 VIEFAKFSAYVAWKLDDLVYMYSTMNEPNVVWGLGYAAVKSGFPPGYLCLECAGRAM--K 238
Query: 218 HQILAHAAAFSVYQRKYKDKQGGNIGLVVDCEWAEANSDKIEDKSA---AARRLDFQIGW 274
+ + AHA A+ + K +G++ ANSD A AA R F W
Sbjct: 239 NLVQAHARAYDAVKAITKKP----VGVIY------ANSDFTPLTDADREAAERAKFDNRW 288
Query: 275 YLHPIYYGDYPEVMRNNLGDQLPKFMQKDKELVRNSLDFVGLNHYTSRFIAHATKSPEEG 334
+ V+R LG ++ ++ LD++G+N+YT + + G
Sbjct: 289 AF-------FDAVVRGQLGGST-------RDDLKGRLDWIGVNYYTRQVVR------ARG 328
Query: 335 SFYE-AQEMERLVEWEGGEVIGEKAASEWLYVVPWGLRKVLNYIAKTYNNPPIYVTENGM 393
S YE E G G + P GL VL Y+ P + VTENG+
Sbjct: 329 SGYEIVPGYGHGCEPNGVSPAGRPCSDFGWEFYPEGLYNVLKEYWDRYHLP-LLVTENGI 387
Query: 394 DDEENDSSPLHEMLDDKLRVRYFKGYLSAVAQAIKDGADVRGYFVWSLLDNFEWAQGYTK 453
DE D R Y ++ V +A++DG +V GY WSL DN+EWA G++K
Sbjct: 388 ADE-----------GDYQRPYYLVSHVYQVHRALQDGVNVIGYLHWSLADNYEWASGFSK 436
Query: 454 RFGLVYVDYKNGLVRHPKSSAY 475
RFGL+ VDY + H + SA+
Sbjct: 437 RFGLLMVDYSTKRL-HWRPSAF 457
>pdb|1UWQ|A Chain A, Structure Of Beta-glycosidase From Sulfolobus Solfataricus
pdb|1UWQ|B Chain B, Structure Of Beta-glycosidase From Sulfolobus Solfataricus
pdb|1UWR|A Chain A, Structure Of Beta-Glycosidase From Sulfolobus Solfataricus
In Complex With 2-Deoxy-2-Fluoro-Galactose
pdb|1UWR|B Chain B, Structure Of Beta-Glycosidase From Sulfolobus Solfataricus
In Complex With 2-Deoxy-2-Fluoro-Galactose
pdb|1UWS|A Chain A, Structure Of Beta-Glycosidase From Sulfolobus Solfataricus
In Complex With 2-Deoxy-2-Fluoro-Glucose
pdb|1UWS|B Chain B, Structure Of Beta-Glycosidase From Sulfolobus Solfataricus
In Complex With 2-Deoxy-2-Fluoro-Glucose
pdb|1UWT|A Chain A, Structure Of Beta-Glycosidase From Sulfolobus Solfataricus
In Complex With D-Galactohydroximo-1,5-Lactam
pdb|1UWT|B Chain B, Structure Of Beta-Glycosidase From Sulfolobus Solfataricus
In Complex With D-Galactohydroximo-1,5-Lactam
pdb|1UWU|A Chain A, Structure Of Beta-Glycosidase From Sulfolobus Solfataricus
In Complex With D-Glucohydroximo-1,5-Lactam
pdb|1UWU|B Chain B, Structure Of Beta-Glycosidase From Sulfolobus Solfataricus
In Complex With D-Glucohydroximo-1,5-Lactam
pdb|2CEQ|A Chain A, Beta-Glycosidase From Sulfolobus Solfataricus In Complex
With Glucoimidazole
pdb|2CEQ|B Chain B, Beta-Glycosidase From Sulfolobus Solfataricus In Complex
With Glucoimidazole
pdb|2CER|A Chain A, Beta-Glycosidase From Sulfolobus Solfataricus In Complex
With Phenethyl-Substituted Glucoimidazole
pdb|2CER|B Chain B, Beta-Glycosidase From Sulfolobus Solfataricus In Complex
With Phenethyl-Substituted Glucoimidazole
Length = 489
Score = 116 bits (290), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 128/483 (26%), Positives = 196/483 (40%), Gaps = 82/483 (16%)
Query: 24 FPPNFVFGVATSAYQIEGACEEGNRGASIWDDFTH-TEGKIIDKSNGDVAVD---HYHRY 79
FP +F FG + + +Q E + W + H E +GD+ + ++ Y
Sbjct: 4 FPNSFRFGWSQAGFQSEMGTPGSEDPNTDWYKWVHDPENMAAGLVSGDLPENGPGYWGNY 63
Query: 80 KEDIDLIAKLGFDAYRFSISWSRIFPDGLG------------TKI--------------N 113
K D K+G R ++ WSRIFP+ L T++ N
Sbjct: 64 KTFHDNAQKMGLKIARLNVEWSRIFPNPLPRPQNFDESKQDVTEVEINENELKRLDEYAN 123
Query: 114 MEGITFYNNIIDALLQKGIQPYVTLYHWDLPLHLHESM----------GGWLNKEIVKYF 163
+ + Y I L +G+ + +YHW LPL LH+ + GWL+ V F
Sbjct: 124 KDALNHYREIFKDLKSRGLYFILNMYHWPLPLWLHDPIRVRRGDFTGPSGWLSTRTVYEF 183
Query: 164 EIYADTCFASFGDRVKNWITINEP--LQTAVNGYCTGIFAPGRHQHSSTEPYLVAHHQIL 221
++ F D V + T+NEP + F PG + S E A + I+
Sbjct: 184 ARFSAYIAWKFDDLVDEYSTMNEPNVVGGLGYVGVKSGFPPG---YLSFELSRRAMYNII 240
Query: 222 -AHAAAFSVYQRKYKDKQGGNIGLVVDCEWAEANSDKIEDKSAAARRLDFQIGWYLHPIY 280
AHA A+ + K +G++ + +DK D A + W+ I
Sbjct: 241 QAHARAYDGIKSVSKKP----VGIIYANSSFQPLTDK--DMEAVEMAENDNRWWFFDAII 294
Query: 281 YGDYPEVMRNNLGDQLPKFMQKDKELVRNSLDFVGLNHYTSRFIAHATKS-PEEGSFYEA 339
G E+ R N K ++ D ++ LD++G+N+YT + K G +
Sbjct: 295 RG---EITRGN-----EKIVRDD---LKGRLDWIGVNYYTRTVVKRTEKGYVSLGGYGHG 343
Query: 340 QEMERLVEWEGGEVIGEKAASEWLYVVPWGLRKVLNYIAKTYNNPPIYVTENGMDDEEND 399
E + + G + P GL VL Y + +YVTENG+ D+
Sbjct: 344 CERNSV------SLAGLPTSDFGWEFFPEGLYDVLTKYWNRY-HLYMYVTENGIADDA-- 394
Query: 400 SSPLHEMLDDKLRVRYFKGYLSAVAQAIKDGADVRGYFVWSLLDNFEWAQGYTKRFGLVY 459
D R Y ++ V +AI GADVRGY WSL DN+EWA G++ RFGL+
Sbjct: 395 ---------DYQRPYYLVSHVYQVHRAINSGADVRGYLHWSLADNYEWASGFSMRFGLLK 445
Query: 460 VDY 462
VDY
Sbjct: 446 VDY 448
>pdb|4EAM|A Chain A, 1.70a Resolution Structure Of Apo Beta-Glycosidase (W33g)
From Sulfolobus Solfataricus
pdb|4EAM|B Chain B, 1.70a Resolution Structure Of Apo Beta-Glycosidase (W33g)
From Sulfolobus Solfataricus
pdb|4EAN|A Chain A, 1.75a Resolution Structure Of Indole Bound
Beta-Glycosidase (W33g) From Sulfolobus Solfataricus
pdb|4EAN|B Chain B, 1.75a Resolution Structure Of Indole Bound
Beta-Glycosidase (W33g) From Sulfolobus Solfataricus
Length = 489
Score = 114 bits (285), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 127/483 (26%), Positives = 195/483 (40%), Gaps = 82/483 (16%)
Query: 24 FPPNFVFGVATSAYQIE---GACEEGNRGASIW-DDFTHTEGKIIDKSNGDVAVDHYHRY 79
FP +F FG + + +Q E E+ N W D + ++ + ++ Y
Sbjct: 4 FPNSFRFGWSQAGFQSEMGTPGSEDPNTDGYKWVHDPENMAAGLVSGDLPENGPGYWGNY 63
Query: 80 KEDIDLIAKLGFDAYRFSISWSRIFPDGLG------------TKI--------------N 113
K D K+G R ++ WSRIFP+ L T++ N
Sbjct: 64 KTFHDNAQKMGLKIARLNVEWSRIFPNPLPRPQNFDESKQDVTEVEINENELKRLDEYAN 123
Query: 114 MEGITFYNNIIDALLQKGIQPYVTLYHWDLPLHLHESM----------GGWLNKEIVKYF 163
+ + Y I L +G+ + +YHW LPL LH+ + GWL+ V F
Sbjct: 124 KDALNHYREIFKDLKSRGLYFILNMYHWPLPLWLHDPIRVRRGDFTGPSGWLSTRTVYEF 183
Query: 164 EIYADTCFASFGDRVKNWITINEP--LQTAVNGYCTGIFAPGRHQHSSTEPYLVAHHQIL 221
++ F D V + T+NEP + F PG + S E A + I+
Sbjct: 184 ARFSAYIAWKFDDLVDEYSTMNEPNVVGGLGYVGVKSGFPPG---YLSFELSRRAMYNII 240
Query: 222 -AHAAAFSVYQRKYKDKQGGNIGLVVDCEWAEANSDKIEDKSAAARRLDFQIGWYLHPIY 280
AHA A+ + K +G++ + +DK D A + W+ I
Sbjct: 241 QAHARAYDGIKSVSKKP----VGIIYANSSFQPLTDK--DMEAVEMAENDNRWWFFDAII 294
Query: 281 YGDYPEVMRNNLGDQLPKFMQKDKELVRNSLDFVGLNHYTSRFIAHATKS-PEEGSFYEA 339
G E+ R N K ++ D ++ LD++G+N+YT + K G +
Sbjct: 295 RG---EITRGN-----EKIVRDD---LKGRLDWIGVNYYTRTVVKRTEKGYVSLGGYGHG 343
Query: 340 QEMERLVEWEGGEVIGEKAASEWLYVVPWGLRKVLNYIAKTYNNPPIYVTENGMDDEEND 399
E + + G + P GL VL Y + +YVTENG+ D+
Sbjct: 344 CERNSV------SLAGLPTSDFGWEFFPEGLYDVLTKYWNRY-HLYMYVTENGIADDA-- 394
Query: 400 SSPLHEMLDDKLRVRYFKGYLSAVAQAIKDGADVRGYFVWSLLDNFEWAQGYTKRFGLVY 459
D R Y ++ V +AI GADVRGY WSL DN+EWA G++ RFGL+
Sbjct: 395 ---------DYQRPYYLVSHVYQVHRAINSGADVRGYLHWSLADNYEWASGFSMRFGLLK 445
Query: 460 VDY 462
VDY
Sbjct: 446 VDY 448
>pdb|1GOW|A Chain A, Beta-Glycosidase From Sulfolobus Solfataricus
pdb|1GOW|B Chain B, Beta-Glycosidase From Sulfolobus Solfataricus
Length = 489
Score = 111 bits (277), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 127/483 (26%), Positives = 193/483 (39%), Gaps = 82/483 (16%)
Query: 24 FPPNFVFGVATSAYQIEGACEEGNRGASIWDDFTH-TEGKIIDKSNGDVAVD---HYHRY 79
FP +F FG + + +Q E + W + H E +GD+ + ++ Y
Sbjct: 4 FPNSFRFGWSQAGFQSEMGTPGSEDPNTDWYKWVHDPENMAAGLVSGDLPENGPGYWGNY 63
Query: 80 KEDIDLIAKLGFDAYRFSISWSRIFPDGLG------------TKI--------------N 113
K D K+G R + WSR FP+ L T++ N
Sbjct: 64 KTFHDNAQKMGLKIARLNSEWSRQFPNPLPRPQNFDESKQDVTEVEINENELKRLDEYAN 123
Query: 114 MEGITFYNNIIDALLQKGIQPYVTLYHWDLPLHLHESM----------GGWLNKEIVKYF 163
+ + Y I L +G+ +YHW LPL LH+ + GWL+ V F
Sbjct: 124 KDALNHYREIFKDLKSRGLYFIQNMYHWPLPLWLHDPIRVRRGDFTGPSGWLSTRTVYEF 183
Query: 164 EIYADTCFASFGDRVKNWITINEP--LQTAVNGYCTGIFAPGRHQHSSTEPYLVAHHQIL 221
++ F D V + T+NEP + F PG + S E A + I+
Sbjct: 184 ARFSAYTAWKFDDLVDEYSTMNEPNVVGGLGYVGVKSGFPPG---YLSFELSRRAMYNII 240
Query: 222 -AHAAAFSVYQRKYKDKQGGNIGLVVDCEWAEANSDKIEDKSAAARRLDFQIGWYLHPIY 280
AHA A+ + K +G++ + +DK D A + W+ I
Sbjct: 241 QAHARAYDGIKSVSKKP----VGIIYANSSFQPLTDK--DMEAVEMAENDNRWWFFDAII 294
Query: 281 YGDYPEVMRNNLGDQLPKFMQKDKELVRNSLDFVGLNHYTSRFIAHATKS-PEEGSFYEA 339
G E+ R N K ++ D ++ LD++G+N+YT + K G +
Sbjct: 295 RG---EITRGN-----EKIVRDD---LKGRLDWIGVNYYTRTVVKRTEKGYVSLGGYGHG 343
Query: 340 QEMERLVEWEGGEVIGEKAASEWLYVVPWGLRKVLNYIAKTYNNPPIYVTENGMDDEEND 399
E + + G + P GL VL Y + +YVTENG+ D+
Sbjct: 344 CERNSV------SLAGLPTSDFGWEFFPEGLYDVLTKYWNRY-HLYMYVTENGIADDA-- 394
Query: 400 SSPLHEMLDDKLRVRYFKGYLSAVAQAIKDGADVRGYFVWSLLDNFEWAQGYTKRFGLVY 459
D R Y ++ V +AI GADVRGY WSL DN+EWA G++ RFGL+
Sbjct: 395 ---------DYQRPYYLVSHVYQVHRAINSGADVRGYLHWSLADNYEWASGFSMRFGLLK 445
Query: 460 VDY 462
VDY
Sbjct: 446 VDY 448
>pdb|1UWI|A Chain A, Crystal Structure Of Mutated Beta-Glycosidase From
Sulfolobus Solfataricus, Working At Moderate Temperature
pdb|1UWI|B Chain B, Crystal Structure Of Mutated Beta-Glycosidase From
Sulfolobus Solfataricus, Working At Moderate Temperature
pdb|1UWI|C Chain C, Crystal Structure Of Mutated Beta-Glycosidase From
Sulfolobus Solfataricus, Working At Moderate Temperature
pdb|1UWI|D Chain D, Crystal Structure Of Mutated Beta-Glycosidase From
Sulfolobus Solfataricus, Working At Moderate Temperature
Length = 489
Score = 108 bits (271), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 130/497 (26%), Positives = 197/497 (39%), Gaps = 83/497 (16%)
Query: 24 FPPNFVFGVATSAYQIEGACEEGNRGASIWDDFTH-TEGKIIDKSNGDVAVD---HYHRY 79
FP +F FG + + +Q E + W + H E +GD+ + ++ Y
Sbjct: 4 FPNSFRFGWSQAGFQSEMGTPGSEDLNTDWYKWVHDPENMAAGLVSGDLPENGPGYWGNY 63
Query: 80 KEDIDLIAKLGFDAYRFSISWSRIFPDGLG------------TKI--------------N 113
K + K+G R + WSR FP+ L T++ N
Sbjct: 64 KTFHNNAQKMGLKIARLNSEWSRQFPNPLPRPQNFDESKQDVTEVEINENELKRLDEYAN 123
Query: 114 MEGITFYNNIIDALLQKGIQPYVTLYHWDLPLHLHESM----------GGWLNKEIVKYF 163
+ + Y I L +G+ +YHW LPL LH+ + GWL+ V F
Sbjct: 124 KDALNHYREIFKDLKSRGLYFIQNMYHWPLPLWLHDPIRVRRGDFTGPSGWLSTRTVYEF 183
Query: 164 EIYADTCFASFGDRVKNWITINEP--LQTAVNGYCTGIFAPGRHQHSSTEPYLVAHHQIL 221
++ F D V + T+NEP + F PG + S E A + I+
Sbjct: 184 ARFSAYTAWKFDDLVDEYSTMNEPNVVGGLGYVGVKSGFPPG---YLSFELSRRAMYNII 240
Query: 222 -AHAAAFSVYQRKYKDKQGGNIGLVVDCEWAEANSDKIEDKSAAARRLDFQIGWYLHPIY 280
AHA A+ + K +G++ + +DK D A + W+ I
Sbjct: 241 QAHARAYDGIKSVSKKP----VGIIYANSSFQPLTDK--DMEAVEMAENDNRWWFFDAII 294
Query: 281 YGDYPEVMRNNLGDQLPKFMQKDKELVRNSLDFVGLNHYTSRFIAHATKS-PEEGSFYEA 339
G E+ R N K ++ D ++ LD++G+N+YT + K G +
Sbjct: 295 RG---EITRGN-----EKIVRDD---LKGRLDWIGVNYYTRTVVKRTGKGYVSLGGYGHG 343
Query: 340 QEMERLVEWEGGEVIGEKAASEWLYVVPWGLRKVLNYIAKTYNNPPIYVTENGMDDEEND 399
E + + G + P GL VL Y + +YVTENG+ D+
Sbjct: 344 CERNSV------SLAGLPTSDFGWEFFPEGLYDVLTKYWNRY-HLYMYVTENGIADDA-- 394
Query: 400 SSPLHEMLDDKLRVRYFKGYLSAVAQAIKDGADVRGYFVWSLLDNFEWAQGYTKRFGLVY 459
D R Y ++ V +AI GADVRGY WSL DN+EWA G++ RFGL+
Sbjct: 395 ---------DYQRPYYLVSHVYQVHRAINSGADVRGYLHWSLADNYEWASGFSMRFGLLK 445
Query: 460 VDYKNG-LVRHPKSSAY 475
VDY L P S Y
Sbjct: 446 VDYNTKRLYWRPSSLVY 462
>pdb|4EKJ|A Chain A, Crystal Structure Of A Monomeric Beta-xylosidase From
Caulobacter Crescentus Cb15
Length = 500
Score = 32.3 bits (72), Expect = 0.67, Method: Compositional matrix adjust.
Identities = 22/58 (37%), Positives = 30/58 (51%), Gaps = 9/58 (15%)
Query: 86 IAKLGFDAYRFSISWSRIFPDGLGTKINMEGITFYN-----NIIDALLQKGIQPYVTL 138
+ +LGF RF IF D LGT +G Y+ + DALL KGI+P++ L
Sbjct: 51 VDELGFRYIRFHA----IFHDVLGTVKVQDGKIVYDWTKIDQLYDALLAKGIKPFIEL 104
>pdb|1V8F|A Chain A, Crystal Structure Of Pantoate-Beta-Alanine (Pantothenate
Synthetase) From Thermus Thermophilus Hb8
pdb|1V8F|B Chain B, Crystal Structure Of Pantoate-Beta-Alanine (Pantothenate
Synthetase) From Thermus Thermophilus Hb8
Length = 276
Score = 30.8 bits (68), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 14/47 (29%), Positives = 26/47 (55%), Gaps = 5/47 (10%)
Query: 74 DHYHRYKEDID----LIAKLGFDAYRFSISWSRIFPDGLGTKINMEG 116
+ YHRY D++ L+ + G D F+ ++P+G T++ +EG
Sbjct: 61 EDYHRYPRDLERDRALLQEAGVDLL-FAPGVEEMYPEGFATRVQVEG 106
>pdb|4FF7|A Chain A, Structure Of C126s Mutant Of Saccharomyces Cerevisiae
Triosephosphate Isomerase
pdb|4FF7|B Chain B, Structure Of C126s Mutant Of Saccharomyces Cerevisiae
Triosephosphate Isomerase
Length = 248
Score = 30.8 bits (68), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 39/138 (28%), Positives = 55/138 (39%), Gaps = 26/138 (18%)
Query: 318 HYTSRFIAHATKSPEEGSFYEAQEMERLVEWEGGEVIGEKAASEWLYVVPWGLRKVLNYI 377
H +FIA TK F Q + ++ GE + EK A + L VV L VL +
Sbjct: 103 HEDDKFIADKTK------FALGQGVGVILSI--GETLEEKKAGKTLDVVERQLNAVLEEV 154
Query: 378 AKTYNN-----PPIYVTENGMDDEENDSSPLH--------EMLDDK----LRVRYFKGYL 420
K + N P++ G+ D+ +H L DK LR+ Y
Sbjct: 155 -KDWTNVVVAYEPVWAIGTGLAATPEDAQDIHASIRKFLASKLGDKAASELRILYGGSAN 213
Query: 421 SAVAQAIKDGADVRGYFV 438
+ A KD ADV G+ V
Sbjct: 214 GSNAVTFKDKADVDGFLV 231
>pdb|1NF0|A Chain A, Triosephosphate Isomerase In Complex With Dhap
pdb|1NF0|B Chain B, Triosephosphate Isomerase In Complex With Dhap
pdb|1NEY|A Chain A, Triosephosphate Isomerase In Complex With Dhap
pdb|1NEY|B Chain B, Triosephosphate Isomerase In Complex With Dhap
Length = 247
Score = 30.8 bits (68), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 39/138 (28%), Positives = 54/138 (39%), Gaps = 26/138 (18%)
Query: 318 HYTSRFIAHATKSPEEGSFYEAQEMERLVEWEGGEVIGEKAASEWLYVVPWGLRKVLNYI 377
H +FIA TK F Q + ++ GE + EK A + L VV L VL +
Sbjct: 102 HEDDKFIADKTK------FALGQGVGVILCI--GETLEEKKAGKTLDVVERQLNAVLEEV 153
Query: 378 AKTYNN-----PPIYVTENGMDDEENDSSPLH--------EMLDDK----LRVRYFKGYL 420
K + N P+ G+ D+ +H L DK LR+ Y
Sbjct: 154 -KDFTNVVVAYEPVXAIGTGLAATPEDAQDIHASIRKFLASKLGDKAASELRILYGGSAN 212
Query: 421 SAVAQAIKDGADVRGYFV 438
+ A KD ADV G+ V
Sbjct: 213 GSNAVTFKDKADVDGFLV 230
>pdb|1I45|A Chain A, Yeast Triosephosphate Isomerase (Mutant)
pdb|1I45|B Chain B, Yeast Triosephosphate Isomerase (Mutant)
Length = 248
Score = 30.4 bits (67), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 39/138 (28%), Positives = 54/138 (39%), Gaps = 26/138 (18%)
Query: 318 HYTSRFIAHATKSPEEGSFYEAQEMERLVEWEGGEVIGEKAASEWLYVVPWGLRKVLNYI 377
H +FIA TK F Q + ++ GE + EK A + L VV L VL +
Sbjct: 103 HEDDKFIADKTK------FALGQGVGVILCI--GETLEEKKAGKTLDVVERQLNAVLEEV 154
Query: 378 AKTYNN-----PPIYVTENGMDDEENDSSPLH--------EMLDDK----LRVRYFKGYL 420
K + N P+ G+ D+ +H L DK LR+ Y
Sbjct: 155 -KDFTNVVVAYEPVXAIGTGLAATPEDAQDIHASIRKFLASKLGDKAASELRILYGGSAN 213
Query: 421 SAVAQAIKDGADVRGYFV 438
+ A KD ADV G+ V
Sbjct: 214 GSNAVTFKDKADVDGFLV 231
>pdb|1YPI|A Chain A, Structure Of Yeast Triosephosphate Isomerase At 1.9-
Angstroms Resolution
pdb|1YPI|B Chain B, Structure Of Yeast Triosephosphate Isomerase At 1.9-
Angstroms Resolution
pdb|2YPI|A Chain A, Crystallographic Analysis Of The Complex Between
Triosephosphate Isomerase And 2-Phosphoglycolate At 2.5-
Angstroms Resolution. Implications For Catalysis
pdb|2YPI|B Chain B, Crystallographic Analysis Of The Complex Between
Triosephosphate Isomerase And 2-Phosphoglycolate At 2.5-
Angstroms Resolution. Implications For Catalysis
pdb|7TIM|A Chain A, Structure Of The Triosephosphate Isomerase-
Phosphoglycolohydroxamate Complex: An Analogue Of The
Intermediate On The Reaction Pathway
pdb|7TIM|B Chain B, Structure Of The Triosephosphate Isomerase-
Phosphoglycolohydroxamate Complex: An Analogue Of The
Intermediate On The Reaction Pathway
Length = 247
Score = 30.0 bits (66), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 39/138 (28%), Positives = 55/138 (39%), Gaps = 26/138 (18%)
Query: 318 HYTSRFIAHATKSPEEGSFYEAQEMERLVEWEGGEVIGEKAASEWLYVVPWGLRKVLNYI 377
H +FIA TK F Q + ++ GE + EK A + L VV L VL +
Sbjct: 102 HEDDKFIADKTK------FALGQGVGVILCI--GETLEEKKAGKTLDVVERQLNAVLEEV 153
Query: 378 AKTYNN-----PPIYVTENGMDDEENDSSPLH--------EMLDDK----LRVRYFKGYL 420
K + N P++ G+ D+ +H L DK LR+ Y
Sbjct: 154 -KDWTNVVVAYEPVWAIGTGLAATPEDAQDIHASIRKFLASKLGDKAASELRILYGGSAN 212
Query: 421 SAVAQAIKDGADVRGYFV 438
+ A KD ADV G+ V
Sbjct: 213 GSNAVTFKDKADVDGFLV 230
>pdb|3YPI|A Chain A, Electrophilic Catalysis In Triosephosphase Isomerase: The
Role Of Histidine-95
pdb|3YPI|B Chain B, Electrophilic Catalysis In Triosephosphase Isomerase: The
Role Of Histidine-95
Length = 247
Score = 30.0 bits (66), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 39/138 (28%), Positives = 55/138 (39%), Gaps = 26/138 (18%)
Query: 318 HYTSRFIAHATKSPEEGSFYEAQEMERLVEWEGGEVIGEKAASEWLYVVPWGLRKVLNYI 377
H +FIA TK F Q + ++ GE + EK A + L VV L VL +
Sbjct: 102 HEDDKFIADKTK------FALGQGVGVILCI--GETLEEKKAGKTLDVVERQLNAVLEEV 153
Query: 378 AKTYNN-----PPIYVTENGMDDEENDSSPLH--------EMLDDK----LRVRYFKGYL 420
K + N P++ G+ D+ +H L DK LR+ Y
Sbjct: 154 -KDWTNVVVAYEPVWAIGTGLAATPEDAQDIHASIRKFLASKLGDKAASELRILYGGSAN 212
Query: 421 SAVAQAIKDGADVRGYFV 438
+ A KD ADV G+ V
Sbjct: 213 GSNAVTFKDKADVDGFLV 230
Database: pdbaa
Posted date: Mar 3, 2013 10:34 PM
Number of letters in database: 14,973,337
Number of sequences in database: 62,578
Lambda K H
0.320 0.138 0.433
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 16,834,475
Number of Sequences: 62578
Number of extensions: 773721
Number of successful extensions: 2175
Number of sequences better than 100.0: 105
Number of HSP's better than 100.0 without gapping: 74
Number of HSP's successfully gapped in prelim test: 31
Number of HSP's that attempted gapping in prelim test: 1697
Number of HSP's gapped (non-prelim): 111
length of query: 492
length of database: 14,973,337
effective HSP length: 103
effective length of query: 389
effective length of database: 8,527,803
effective search space: 3317315367
effective search space used: 3317315367
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 53 (25.0 bits)