Query 011147
Match_columns 492
No_of_seqs 245 out of 2099
Neff 6.4
Searched_HMMs 29240
Date Mon Mar 25 21:46:55 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/011147.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/011147hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3lhh_A CBS domain protein; str 99.9 1.8E-23 6.1E-28 192.8 11.8 166 164-389 5-171 (172)
2 3ocm_A Putative membrane prote 99.9 3.2E-22 1.1E-26 185.6 13.8 154 182-392 13-167 (173)
3 3oi8_A Uncharacterized protein 99.9 1E-21 3.5E-26 178.0 9.3 154 165-377 2-156 (156)
4 3lv9_A Putative transporter; C 99.8 4.8E-20 1.6E-24 164.7 12.6 144 185-384 3-147 (148)
5 3oco_A Hemolysin-like protein 99.8 2.3E-20 7.7E-25 168.1 7.3 147 188-390 3-151 (153)
6 3lfr_A Putative metal ION tran 99.8 8.9E-19 3E-23 154.8 8.4 134 203-390 1-135 (136)
7 3k6e_A CBS domain protein; str 99.7 8.9E-18 3E-22 153.0 10.5 147 195-391 4-151 (156)
8 3hf7_A Uncharacterized CBS-dom 99.7 1.5E-17 5E-22 146.0 7.6 128 204-384 1-129 (130)
9 3jtf_A Magnesium and cobalt ef 99.7 7.9E-17 2.7E-21 140.8 11.2 126 202-384 2-128 (129)
10 3i8n_A Uncharacterized protein 99.7 4.2E-17 1.4E-21 142.5 8.9 128 201-382 2-130 (130)
11 3nqr_A Magnesium and cobalt ef 99.7 1.4E-16 4.8E-21 138.6 8.2 125 203-381 1-126 (127)
12 3kxr_A Magnesium transporter, 99.6 4.6E-14 1.6E-18 134.3 15.4 146 166-381 25-174 (205)
13 2yvy_A MGTE, Mg2+ transporter 99.5 9.5E-14 3.2E-18 137.6 12.4 136 186-381 116-257 (278)
14 2zy9_A Mg2+ transporter MGTE; 99.5 1.6E-13 5.4E-18 146.5 13.4 153 165-381 110-277 (473)
15 2qrd_G Protein C1556.08C; AMPK 99.5 8.4E-14 2.9E-18 139.9 10.7 162 186-381 2-172 (334)
16 4esy_A CBS domain containing m 99.5 8.3E-14 2.9E-18 127.3 8.7 145 192-384 7-165 (170)
17 2v8q_E 5'-AMP-activated protei 99.5 1.4E-13 4.8E-18 138.3 11.2 160 183-381 15-177 (330)
18 3ctu_A CBS domain protein; str 99.5 1.9E-13 6.5E-18 122.5 9.9 146 196-391 6-151 (156)
19 3t4n_C Nuclear protein SNF4; C 99.4 1E-13 3.5E-18 138.7 8.1 158 184-381 8-177 (323)
20 3fhm_A Uncharacterized protein 99.4 1.3E-12 4.5E-17 118.6 11.4 140 197-389 16-157 (165)
21 2emq_A Hypothetical conserved 99.4 1.9E-12 6.5E-17 115.7 12.0 147 196-391 2-148 (157)
22 3lqn_A CBS domain protein; csg 99.4 8.8E-13 3E-17 117.2 9.2 134 200-381 10-143 (150)
23 2yzi_A Hypothetical protein PH 99.3 4.1E-12 1.4E-16 111.1 11.1 132 200-387 2-134 (138)
24 4fry_A Putative signal-transdu 99.3 2.4E-12 8.2E-17 115.4 9.8 132 205-390 7-143 (157)
25 2ef7_A Hypothetical protein ST 99.3 8.5E-12 2.9E-16 108.4 12.3 124 202-381 1-125 (133)
26 4gqw_A CBS domain-containing p 99.3 2.2E-12 7.4E-17 114.0 8.3 132 203-381 3-143 (152)
27 2oux_A Magnesium transporter; 99.3 8.8E-12 3E-16 124.2 13.4 135 187-381 119-259 (286)
28 2rc3_A CBS domain; in SITU pro 99.3 4.5E-12 1.5E-16 110.6 9.5 123 206-381 7-131 (135)
29 3kpb_A Uncharacterized protein 99.3 7.9E-12 2.7E-16 106.8 10.8 119 205-381 1-120 (122)
30 2rih_A Conserved protein with 99.3 7.1E-12 2.4E-16 110.3 10.4 122 205-381 5-128 (141)
31 1yav_A Hypothetical protein BS 99.3 7.1E-12 2.4E-16 112.7 9.4 139 201-388 10-148 (159)
32 3fv6_A YQZB protein; CBS domai 99.3 1.4E-11 4.7E-16 111.1 11.2 127 202-381 14-144 (159)
33 3k2v_A Putative D-arabinose 5- 99.3 4.2E-12 1.4E-16 113.1 6.7 120 205-377 28-148 (149)
34 3sl7_A CBS domain-containing p 99.3 6.7E-12 2.3E-16 114.4 8.1 135 204-381 3-156 (180)
35 2p9m_A Hypothetical protein MJ 99.3 1.1E-11 3.9E-16 108.1 9.0 126 202-381 5-136 (138)
36 3gby_A Uncharacterized protein 99.3 3.2E-11 1.1E-15 104.5 11.6 123 203-381 3-126 (128)
37 1o50_A CBS domain-containing p 99.2 3.3E-11 1.1E-15 108.2 11.0 133 202-381 13-153 (157)
38 1pbj_A Hypothetical protein; s 99.2 3E-11 1E-15 103.4 10.3 121 205-381 1-122 (125)
39 2j9l_A Chloride channel protei 99.2 2.2E-11 7.4E-16 111.6 9.4 150 202-381 8-165 (185)
40 2nyc_A Nuclear protein SNF4; b 99.2 3E-11 1E-15 105.8 9.7 130 201-381 4-141 (144)
41 2pfi_A Chloride channel protei 99.2 3E-11 1E-15 108.3 9.0 139 195-381 3-147 (164)
42 1pvm_A Conserved hypothetical 99.2 4E-11 1.4E-15 110.8 9.9 124 205-381 9-133 (184)
43 3kh5_A Protein MJ1225; AMPK, A 99.2 3.4E-11 1.2E-15 116.9 9.0 154 165-381 51-205 (280)
44 1y5h_A Hypothetical protein RV 99.2 2.2E-11 7.7E-16 105.7 5.6 126 202-381 5-131 (133)
45 2o16_A Acetoin utilization pro 99.1 1.2E-10 4.1E-15 105.1 10.1 132 203-381 3-135 (160)
46 2uv4_A 5'-AMP-activated protei 99.1 1.5E-10 5.2E-15 103.3 10.6 131 202-381 20-151 (152)
47 1zfj_A Inosine monophosphate d 99.1 1.2E-10 4E-15 124.5 11.6 151 165-381 54-211 (491)
48 3org_A CMCLC; transporter, tra 99.1 6.8E-12 2.3E-16 138.4 1.6 59 203-263 451-510 (632)
49 3t4n_C Nuclear protein SNF4; C 99.1 1.8E-10 6E-15 115.1 11.1 135 201-382 183-321 (323)
50 4fxs_A Inosine-5'-monophosphat 99.1 2.3E-11 7.7E-16 130.6 3.4 150 164-379 52-207 (496)
51 2d4z_A Chloride channel protei 99.1 6.1E-10 2.1E-14 109.3 12.9 65 201-268 9-74 (250)
52 3ddj_A CBS domain-containing p 99.1 3.3E-10 1.1E-14 111.7 11.1 149 165-380 64-213 (296)
53 3ddj_A CBS domain-containing p 99.1 3.6E-10 1.2E-14 111.4 10.4 132 202-381 153-285 (296)
54 3pc3_A CG1753, isoform A; CBS, 99.1 2.6E-10 8.9E-15 123.0 10.0 126 202-381 381-511 (527)
55 3kh5_A Protein MJ1225; AMPK, A 99.0 9.8E-10 3.3E-14 106.6 11.7 137 206-381 4-142 (280)
56 3usb_A Inosine-5'-monophosphat 99.0 2.9E-10 9.8E-15 122.4 8.5 151 165-381 77-234 (511)
57 1me8_A Inosine-5'-monophosphat 99.0 4.2E-11 1.5E-15 128.7 1.1 157 165-382 61-222 (503)
58 2cu0_A Inosine-5'-monophosphat 98.9 1.5E-10 5E-15 123.9 1.1 145 165-380 57-207 (486)
59 1vr9_A CBS domain protein/ACT 98.9 9E-09 3.1E-13 97.7 13.0 117 205-381 13-130 (213)
60 4avf_A Inosine-5'-monophosphat 98.9 2.1E-10 7.3E-15 122.9 0.7 149 164-379 51-205 (490)
61 2qrd_G Protein C1556.08C; AMPK 98.9 6.4E-09 2.2E-13 104.2 11.0 128 203-381 180-315 (334)
62 3l2b_A Probable manganase-depe 98.9 5.2E-09 1.8E-13 100.8 9.8 60 204-267 6-65 (245)
63 2yzq_A Putative uncharacterize 98.9 4.2E-09 1.4E-13 102.5 9.0 117 205-381 1-119 (282)
64 2yzq_A Putative uncharacterize 98.8 2.2E-08 7.4E-13 97.5 11.4 134 203-381 124-279 (282)
65 2v8q_E 5'-AMP-activated protei 98.7 3.4E-08 1.1E-12 98.9 9.3 132 204-381 189-323 (330)
66 1vrd_A Inosine-5'-monophosphat 98.4 3.8E-08 1.3E-12 105.2 1.4 132 188-381 82-215 (494)
67 1jcn_A Inosine monophosphate d 98.1 2.4E-07 8.4E-12 99.5 -2.1 123 205-381 108-233 (514)
68 4af0_A Inosine-5'-monophosphat 98.0 8.9E-07 3E-11 94.6 1.0 125 191-379 129-256 (556)
69 3l2b_A Probable manganase-depe 97.8 1.1E-05 3.6E-10 77.5 4.5 58 203-263 183-240 (245)
70 3fv6_A YQZB protein; CBS domai 97.7 4.1E-05 1.4E-09 68.3 5.8 67 201-268 77-145 (159)
71 3jtf_A Magnesium and cobalt ef 97.5 0.00016 5.6E-09 62.0 6.6 60 203-267 67-126 (129)
72 1pbj_A Hypothetical protein; s 97.5 0.00011 3.7E-09 62.1 5.3 58 201-263 61-118 (125)
73 3lhh_A CBS domain protein; str 97.5 0.00022 7.6E-09 64.5 7.6 63 203-270 105-167 (172)
74 2rc3_A CBS domain; in SITU pro 97.5 0.00014 4.9E-09 62.5 5.8 59 202-265 71-129 (135)
75 4fry_A Putative signal-transdu 97.4 0.00011 3.8E-09 65.0 5.2 62 202-268 75-136 (157)
76 3lfr_A Putative metal ION tran 97.4 7E-05 2.4E-09 65.1 3.6 60 202-266 67-126 (136)
77 3kpb_A Uncharacterized protein 97.4 0.00011 3.7E-09 61.9 4.6 56 204-263 61-116 (122)
78 1o50_A CBS domain-containing p 97.4 0.00013 4.3E-09 64.8 5.0 61 201-266 92-152 (157)
79 4esy_A CBS domain containing m 97.4 3E-05 1E-09 70.1 0.9 56 202-262 102-157 (170)
80 3lv9_A Putative transporter; C 97.4 0.00024 8.2E-09 62.2 6.8 59 204-267 87-145 (148)
81 1vr9_A CBS domain protein/ACT 97.4 5.6E-05 1.9E-09 71.3 2.8 92 166-265 30-128 (213)
82 3oco_A Hemolysin-like protein 97.4 0.00025 8.4E-09 62.7 6.4 62 203-269 84-145 (153)
83 3fhm_A Uncharacterized protein 97.4 0.00012 4E-09 65.7 4.2 61 201-266 89-149 (165)
84 4gqw_A CBS domain-containing p 97.4 0.00012 4.2E-09 63.7 4.2 63 201-267 81-143 (152)
85 3ghd_A A cystathionine beta-sy 97.3 0.00027 9.2E-09 55.4 5.5 45 216-263 1-45 (70)
86 3fio_A A cystathionine beta-sy 97.3 0.00022 7.5E-09 54.4 4.8 44 217-263 2-45 (70)
87 2nyc_A Nuclear protein SNF4; b 97.3 0.00021 7.1E-09 61.7 4.9 63 202-266 74-140 (144)
88 2o16_A Acetoin utilization pro 97.3 0.00029 1E-08 62.8 6.0 63 202-269 75-137 (160)
89 2ef7_A Hypothetical protein ST 97.3 0.00026 9E-09 60.5 5.2 61 204-268 66-126 (133)
90 3i8n_A Uncharacterized protein 97.3 0.00033 1.1E-08 60.1 5.8 59 203-266 70-128 (130)
91 3sl7_A CBS domain-containing p 97.2 0.00018 6.1E-09 64.7 4.1 65 201-269 94-158 (180)
92 2uv4_A 5'-AMP-activated protei 97.2 0.00031 1.1E-08 61.9 5.6 60 203-264 85-148 (152)
93 3lqn_A CBS domain protein; csg 97.2 0.00055 1.9E-08 59.9 7.1 62 202-269 84-145 (150)
94 3hf7_A Uncharacterized CBS-dom 97.2 0.00031 1.1E-08 60.5 5.2 59 203-266 68-126 (130)
95 3gby_A Uncharacterized protein 97.2 0.0003 1E-08 60.1 5.0 57 205-265 68-124 (128)
96 1y5h_A Hypothetical protein RV 97.2 9.6E-05 3.3E-09 63.3 1.8 55 202-261 71-125 (133)
97 3nqr_A Magnesium and cobalt ef 97.2 0.00026 8.8E-09 60.5 4.3 57 203-264 67-123 (127)
98 1pvm_A Conserved hypothetical 97.1 0.00044 1.5E-08 63.1 5.0 57 202-262 72-128 (184)
99 2p9m_A Hypothetical protein MJ 97.1 0.00032 1.1E-08 60.3 3.8 60 202-265 70-134 (138)
100 2emq_A Hypothetical conserved 97.0 0.0012 4.3E-08 57.9 7.1 62 202-269 80-141 (157)
101 2j9l_A Chloride channel protei 97.0 0.00088 3E-08 60.4 5.8 62 202-268 105-166 (185)
102 2yzi_A Hypothetical protein PH 97.0 0.0012 4.1E-08 56.7 6.3 61 202-267 69-129 (138)
103 3k2v_A Putative D-arabinose 5- 96.9 0.00055 1.9E-08 60.1 4.0 55 201-260 91-145 (149)
104 3k6e_A CBS domain protein; str 96.9 0.00047 1.6E-08 61.8 3.5 63 202-270 83-145 (156)
105 1yav_A Hypothetical protein BS 96.9 0.00077 2.7E-08 59.7 4.9 62 202-269 83-144 (159)
106 2rih_A Conserved protein with 96.9 0.00075 2.6E-08 58.4 4.6 55 204-263 70-124 (141)
107 3kxr_A Magnesium transporter, 96.9 0.0011 3.9E-08 62.2 5.9 62 202-267 113-174 (205)
108 3ctu_A CBS domain protein; str 96.8 0.0009 3.1E-08 59.0 4.4 62 203-270 84-145 (156)
109 3oi8_A Uncharacterized protein 96.8 0.0007 2.4E-08 60.1 3.7 53 203-260 101-153 (156)
110 3fio_A A cystathionine beta-sy 96.7 0.002 7E-08 48.8 5.4 38 337-381 11-49 (70)
111 3ocm_A Putative membrane prote 96.5 0.0023 7.9E-08 58.2 5.1 61 203-269 99-159 (173)
112 2pfi_A Chloride channel protei 96.5 0.0021 7.3E-08 56.6 4.6 64 203-269 82-149 (164)
113 3ghd_A A cystathionine beta-sy 96.5 0.0041 1.4E-07 48.5 5.7 38 337-381 11-49 (70)
114 2yvy_A MGTE, Mg2+ transporter 96.3 0.0024 8.3E-08 62.5 4.2 59 203-265 197-255 (278)
115 2oux_A Magnesium transporter; 96.2 0.0035 1.2E-07 61.8 4.7 61 203-267 199-259 (286)
116 1me8_A Inosine-5'-monophosphat 95.7 0.0017 5.8E-08 69.5 0.0 62 203-266 159-220 (503)
117 2zy9_A Mg2+ transporter MGTE; 95.7 0.0098 3.4E-07 63.1 5.5 61 203-267 217-277 (473)
118 3usb_A Inosine-5'-monophosphat 95.5 0.009 3.1E-07 64.1 4.7 59 202-263 172-230 (511)
119 3org_A CMCLC; transporter, tra 95.5 0.011 3.6E-07 65.1 5.1 51 206-261 569-619 (632)
120 4avf_A Inosine-5'-monophosphat 95.2 0.0034 1.2E-07 67.0 0.0 59 203-263 145-203 (490)
121 1vrd_A Inosine-5'-monophosphat 95.1 0.0045 1.6E-07 65.8 0.6 62 203-266 153-214 (494)
122 4fxs_A Inosine-5'-monophosphat 94.9 0.0049 1.7E-07 65.9 0.2 58 203-262 147-204 (496)
123 3pc3_A CG1753, isoform A; CBS, 94.3 0.031 1.1E-06 59.8 4.8 72 192-268 435-512 (527)
124 2d4z_A Chloride channel protei 93.9 0.033 1.1E-06 54.1 3.7 52 209-265 193-244 (250)
125 1zfj_A Inosine monophosphate d 93.9 0.054 1.9E-06 57.3 5.7 61 203-266 150-210 (491)
126 1jcn_A Inosine monophosphate d 93.4 0.013 4.5E-07 62.6 -0.2 58 203-262 171-228 (514)
127 4af0_A Inosine-5'-monophosphat 92.3 0.026 8.7E-07 60.5 0.0 55 203-261 198-252 (556)
128 2cu0_A Inosine-5'-monophosphat 90.4 0.05 1.7E-06 57.7 0.0 57 203-263 148-204 (486)
129 3ded_A Probable hemolysin; str 82.9 0.1 3.5E-06 44.6 -2.4 31 410-440 58-92 (113)
130 2r2z_A Hemolysin; APC85144, en 63.1 0.77 2.6E-05 37.3 -1.8 31 410-440 37-70 (93)
131 3lae_A UPF0053 protein HI0107; 47.8 2.9 9.8E-05 33.0 -0.8 28 413-440 33-61 (81)
132 3llb_A Uncharacterized protein 43.7 2.7 9.2E-05 33.3 -1.6 28 413-440 33-61 (83)
133 2jaf_A Halorhodopsin, HR; chro 38.9 2.6E+02 0.009 26.9 11.6 39 110-150 178-216 (274)
134 2pli_A Uncharacterized protein 36.6 4.2 0.00014 32.8 -1.5 28 413-440 42-70 (91)
135 2p13_A CBS domain; alpha-beta 33.1 5.1 0.00017 32.1 -1.5 51 365-440 18-69 (90)
136 2o3g_A Putative protein; APC85 32.3 5.1 0.00017 32.3 -1.7 28 413-440 43-71 (92)
137 2pls_A CBS domain protein; APC 31.1 5.4 0.00018 31.7 -1.7 52 365-440 12-65 (86)
138 2rk5_A Putative hemolysin; str 29.0 5.2 0.00018 31.9 -2.1 27 413-439 32-61 (87)
139 2p4p_A Hypothetical protein HD 29.0 6.5 0.00022 31.2 -1.5 27 414-440 36-63 (86)
140 2oai_A Hemolysin; PFAM03471, x 28.4 5.5 0.00019 32.3 -2.1 52 365-440 21-73 (94)
141 1tif_A IF3-N, translation init 26.2 59 0.002 25.7 3.6 23 351-379 16-38 (78)
142 3qbg_A Halorhodopsin; membrane 24.7 3.8E+02 0.013 26.0 10.1 25 127-151 208-232 (291)
143 2p3h_A Uncharacterized CBS dom 23.7 12 0.0004 31.0 -0.9 47 365-438 15-62 (101)
144 2nqw_A CBS domain protein; PFA 23.5 8.6 0.00029 31.0 -1.8 26 415-440 46-72 (93)
145 1xio_A Anabaena sensory rhodop 22.9 4E+02 0.014 25.3 9.7 40 110-151 145-186 (261)
146 3ug9_A Archaeal-type opsin 1, 22.0 4.5E+02 0.015 26.1 10.1 25 127-151 225-249 (333)
147 3arc_L Photosystem II reaction 21.7 85 0.0029 21.0 3.1 19 12-30 17-35 (37)
148 1m0k_A BR, bacteriorhodopsin; 20.0 5.1E+02 0.017 24.6 9.8 23 129-151 183-205 (262)
No 1
>3lhh_A CBS domain protein; structural genomics, PSI-2, protein structure initiative, midwest center for structural genomics, MCSG, cell membrane; HET: MSE AMP; 2.10A {Shewanella oneidensis}
Probab=99.89 E-value=1.8e-23 Score=192.76 Aligned_cols=166 Identities=17% Similarity=0.323 Sum_probs=98.1
Q ss_pred cccCHHHHHHHHHhhccccCCCCCCChhHHHHHhhcccccccccccccccCcceEEEeCCCChHHHHHHHHHHcCCccce
Q 011147 164 ALLRRAELKTLVDMHGNEAGKGGELTHDETTIITGALDMTQKTAKDAMTAMSKIFSLDINSRLDEKTMGLIISNGHSRVP 243 (492)
Q Consensus 164 ~~~s~eEL~~lv~~~~~e~~~~g~L~~~E~~iI~~vl~l~~~~V~diMtPr~~v~~l~~~~tl~~e~~~~i~~~~~SRiP 243 (492)
..+|++||+.+++. +.+.|.++++|++++++++.|.+.+|+|+|+|+.++++++.++++. ++++.+.+++++++|
T Consensus 5 ~~~t~~el~~l~~~----~~~~g~l~~~e~~~i~~~~~l~~~~v~diM~~~~~~~~v~~~~~v~-~a~~~m~~~~~~~~p 79 (172)
T 3lhh_A 5 DNVTQEDIQAMLQE----GSSAGVIEHNEHAMVKNVFRLDERTISSLMVPRSDIVFLDLNLPLD-ANLRTVMQSPHSRFP 79 (172)
T ss_dssp ------------------------------------------CTTTTSEEGGGCCCEETTSCHH-HHHHHHHTCCCSEEE
T ss_pred ccCCHHHHHHHHHH----HHHcCCCCHHHHHHHHHHhccCCCCHHHhCccHHHeEEEcCCCCHH-HHHHHHHhCCCCEEE
Confidence 46899999999984 5567999999999999999999999999999999999999999998 999999999999999
Q ss_pred EEeCCCCceEEEEEccchHHHHHHhhccchhhHHhhhccCCCcccccccchhhhhhccccccccccccCCCCCCCCcccc
Q 011147 244 IYVGTPTNIIGAILGHSHMAVVVKCKNDSKEIAEMEKSKAPMQHDININSNLKQRQGELKGNVQNEQFNAYMNSPSVISS 323 (492)
Q Consensus 244 V~~~~~d~IvGiv~~~d~m~~vvk~l~~~~~~~~~~~~~~~v~~v~~~~~~~~~~~~~~~~~~~~~~vp~~~~~~~~~~~ 323 (492)
|++++.++++|+|+.+|+++...+. .+.+++++ + ++ +..++.+.
T Consensus 80 Vvd~~~~~lvGivt~~dl~~~~~~~------------~~~~v~~i-------------m-~~--~~~v~~~~-------- 123 (172)
T 3lhh_A 80 VCRNNVDDMVGIISAKQLLSESIAG------------ERLELVDL-------------V-KN--CNFVPNSL-------- 123 (172)
T ss_dssp EESSSTTSEEEEEEHHHHHHHHHTT------------CCCCGGGG-------------C-BC--CEEEETTC--------
T ss_pred EEeCCCCeEEEEEEHHHHHHHHhhc------------CcccHHHH-------------h-cC--CeEeCCCC--------
Confidence 9986557999999966554333211 12234433 1 11 22234433
Q ss_pred hhhhhhhhhhhhhHHHHHHHHhHcCcc-eEEecccCCCCCCCcEEEEechhHHHHHHccCccCCcCc
Q 011147 324 DIDIQSSMAKSADLHLCLKKWERQDVK-ISKEELESLPSVDEEVIGIITLEDVMEELLQEEILDETD 389 (492)
Q Consensus 324 ~l~~~~~~~~~~dl~~~l~~~~~~~~~-~lVv~~~~~pde~g~vvGIITlEDViEeLlgeeI~DEtD 389 (492)
++.++++.|.+++.+ ++|+ |++|+++||||++|++++|+| +|.||.|
T Consensus 124 ------------~l~~a~~~m~~~~~~~~pVv------d~~g~lvGiit~~Dil~~l~~-~~~de~~ 171 (172)
T 3lhh_A 124 ------------SGMELLEHFRTTGSQMVFVV------DEYGDLKGLVTLQDMMDALTG-EFFQEDG 171 (172)
T ss_dssp ------------CHHHHHHHHHHHTCSEEEEE------CTTSCEEEEEEHHHHHHHHHT-TCC----
T ss_pred ------------CHHHHHHHHHHcCCeEEEEE------eCCCCEEEEeeHHHHHHHHhC-CCccccC
Confidence 366789999999999 9999 789999999999999999998 9999987
No 2
>3ocm_A Putative membrane protein; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: ADP; 1.80A {Bordetella parapertussis}
Probab=99.88 E-value=3.2e-22 Score=185.56 Aligned_cols=154 Identities=14% Similarity=0.179 Sum_probs=120.6
Q ss_pred cCCCCCCChhHHHHHhhcccccccccccccccCcceEEEeCCCChHHHHHHHHHHcCCccceEEeCCCCceEEEEEccch
Q 011147 182 AGKGGELTHDETTIITGALDMTQKTAKDAMTAMSKIFSLDINSRLDEKTMGLIISNGHSRVPIYVGTPTNIIGAILGHSH 261 (492)
Q Consensus 182 ~~~~g~L~~~E~~iI~~vl~l~~~~V~diMtPr~~v~~l~~~~tl~~e~~~~i~~~~~SRiPV~~~~~d~IvGiv~~~d~ 261 (492)
++++|.|+++|+++++++++|.+.+|+++|+|+.++++++.++++. ++++.+.+++|+++||++++.++++|+|+.+|+
T Consensus 13 ~~~~g~l~~~e~~~i~~~l~l~~~~v~diM~~~~~v~~v~~~~tv~-ea~~~m~~~~~~~~pVvd~~~~~lvGivt~~Dl 91 (173)
T 3ocm_A 13 MPAVPAFGVEERNMVSGVLTLAERSIRSIMTPRTDVSWVNIDDDAA-TIRQQLTAAPHSFFPVCRGSLDEVVGIGRAKDL 91 (173)
T ss_dssp -----CCCHHHHHHHHHHHHHTTSCSTTTSEEGGGCCCEETTSCHH-HHHHHHHHSSCSEEEEESSSTTSEEEEEEHHHH
T ss_pred HHhcCCcCHHHHHHHHHHhccCCCCHHHhCCcHHHeEEEeCCCCHH-HHHHHHHhCCCCEEEEEeCCCCCEEEEEEHHHH
Confidence 3456999999999999999999999999999999999999999998 999999999999999998655799999996654
Q ss_pred HHHHHHhhccchhhHHhhhccCCCcccccccchhhhhhccccccccccccCCCCCCCCcccchhhhhhhhhhhhhHHHHH
Q 011147 262 MAVVVKCKNDSKEIAEMEKSKAPMQHDININSNLKQRQGELKGNVQNEQFNAYMNSPSVISSDIDIQSSMAKSADLHLCL 341 (492)
Q Consensus 262 m~~vvk~l~~~~~~~~~~~~~~~v~~v~~~~~~~~~~~~~~~~~~~~~~vp~~~~~~~~~~~~l~~~~~~~~~~dl~~~l 341 (492)
++.+.+.. ..+++ ++++ +.+++.+. ++.+++
T Consensus 92 ~~~~~~~~------------~~~v~---------------~~~~--~~~v~~~~--------------------~l~~al 122 (173)
T 3ocm_A 92 VADLITEG------------RVRRN---------------RLRD--PIIVHESI--------------------GILRLM 122 (173)
T ss_dssp HHHHHHHS------------SCCGG---------------GSBC--CCEECGGG--------------------CHHHHH
T ss_pred HHHHhcCC------------cchhH---------------hcCC--CeEECCCC--------------------cHHHHH
Confidence 43332210 11111 1111 12223332 367889
Q ss_pred HHHhHcCcc-eEEecccCCCCCCCcEEEEechhHHHHHHccCccCCcCccch
Q 011147 342 KKWERQDVK-ISKEELESLPSVDEEVIGIITLEDVMEELLQEEILDETDDYV 392 (492)
Q Consensus 342 ~~~~~~~~~-~lVv~~~~~pde~g~vvGIITlEDViEeLlgeeI~DEtD~~~ 392 (492)
+.|.+++.+ ++|+ |++|+++||||++||+++|+| +|.||+|++-
T Consensus 123 ~~m~~~~~~~~~Vv------de~g~lvGiIT~~Dil~~l~~-~i~de~~~~~ 167 (173)
T 3ocm_A 123 DTLKRSRGQLVLVA------DEFGAIEGLVTPIDVFEAIAG-EFPDEDELPD 167 (173)
T ss_dssp HHHHHSTTCCEEEE------CTTCCEEEEECHHHHHHHHHC-CCCCTTSCC-
T ss_pred HHHHHcCCeEEEEE------eCCCCEEEEEeHHHHHHHHhC-cCCCccccHh
Confidence 999999999 9999 789999999999999999999 9999999743
No 3
>3oi8_A Uncharacterized protein; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: ADN; 1.99A {Neisseria meningitidis serogroup B}
Probab=99.85 E-value=1e-21 Score=177.95 Aligned_cols=154 Identities=17% Similarity=0.222 Sum_probs=123.2
Q ss_pred ccCHHHHHHHHHhhccccCCCCCCChhHHHHHhhcccccccccccccccCcceEEEeCCCChHHHHHHHHHHcCCccceE
Q 011147 165 LLRRAELKTLVDMHGNEAGKGGELTHDETTIITGALDMTQKTAKDAMTAMSKIFSLDINSRLDEKTMGLIISNGHSRVPI 244 (492)
Q Consensus 165 ~~s~eEL~~lv~~~~~e~~~~g~L~~~E~~iI~~vl~l~~~~V~diMtPr~~v~~l~~~~tl~~e~~~~i~~~~~SRiPV 244 (492)
.+|++||+.+++. ++++|.++++|+++++++++|.+.+|+|+|+|+.++++++.++++. ++++.+.+++++++||
T Consensus 2 ~~t~~el~~li~~----~~~~g~l~~~e~~~i~~~~~l~~~~v~diM~~~~~~~~v~~~~~i~-~a~~~m~~~~~~~~pV 76 (156)
T 3oi8_A 2 NASAEDVLNLLRQ----AHEQEVFDADTLLRLEKVLDFSDLEVRDAMITRSRMNVLKENDSIE-RITAYVIDTAHSRFPV 76 (156)
T ss_dssp CCCHHHHHHHHHH----HHHTTSSCHHHHHHHHHHHHHTTCBGGGTCEEGGGCCCEETTCCHH-HHHHHHHHHCCSEEEE
T ss_pred CCCHHHHHHHHHh----HHhcCCcCHHHHHHHHHHhccCCCCHhheeeeHHHeEEECCCCCHH-HHHHHHHHCCCCEEEE
Confidence 3789999999995 4457999999999999999999999999999999999999999998 9999999999999999
Q ss_pred EeCCCCceEEEEEccchHHHHHHhhccchhhHHhhhccCCCcccccccchhhhhhccccccccccccCCCCCCCCcccch
Q 011147 245 YVGTPTNIIGAILGHSHMAVVVKCKNDSKEIAEMEKSKAPMQHDININSNLKQRQGELKGNVQNEQFNAYMNSPSVISSD 324 (492)
Q Consensus 245 ~~~~~d~IvGiv~~~d~m~~vvk~l~~~~~~~~~~~~~~~v~~v~~~~~~~~~~~~~~~~~~~~~~vp~~~~~~~~~~~~ 324 (492)
++++.++++|+|+.+|+++ .+... .+.+++++ +++ +.+++.+.
T Consensus 77 vd~~~~~lvGivt~~dl~~----~~~~~--------~~~~v~~i--------------m~~--~~~v~~~~--------- 119 (156)
T 3oi8_A 77 IGEDKDEVLGILHAKDLLK----YMFNP--------EQFHLKSI--------------LRP--AVFVPEGK--------- 119 (156)
T ss_dssp ESSSTTCEEEEEEGGGGGG----GSSCG--------GGCCHHHH--------------CBC--CCEEETTS---------
T ss_pred EcCCCCcEEEEEEHHHHHH----HHHcC--------CcccHHHH--------------cCC--CEEECCCC---------
Confidence 9865568999999666532 22110 11223322 122 22234433
Q ss_pred hhhhhhhhhhhhHHHHHHHHhHcCcc-eEEecccCCCCCCCcEEEEechhHHHH
Q 011147 325 IDIQSSMAKSADLHLCLKKWERQDVK-ISKEELESLPSVDEEVIGIITLEDVME 377 (492)
Q Consensus 325 l~~~~~~~~~~dl~~~l~~~~~~~~~-~lVv~~~~~pde~g~vvGIITlEDViE 377 (492)
++.++++.|++++.+ ++|+ |++|+++||||++|++|
T Consensus 120 -----------~l~~a~~~m~~~~~~~~~Vv------d~~g~~~Givt~~Dile 156 (156)
T 3oi8_A 120 -----------SLTALLKEFREQRNHMAIVI------DEYGGTSGLVTFEDIIE 156 (156)
T ss_dssp -----------BHHHHHHHHHHTTCCEEEEE------CTTSSEEEEEEHHHHCC
T ss_pred -----------CHHHHHHHHHhcCCeEEEEE------CCCCCEEEEEEHHHhcC
Confidence 367789999999999 9999 78999999999999974
No 4
>3lv9_A Putative transporter; CBS domain, PSI, MCSG, structural genomics, protein structur initiative, midwest center for structural genomics; 2.40A {Clostridium difficile 630}
Probab=99.82 E-value=4.8e-20 Score=164.66 Aligned_cols=144 Identities=15% Similarity=0.302 Sum_probs=102.5
Q ss_pred CCCCChhHHHHHhhcccccccccccccccCcceEEEeCCCChHHHHHHHHHHcCCccceEEeCCCCceEEEEEccchHHH
Q 011147 185 GGELTHDETTIITGALDMTQKTAKDAMTAMSKIFSLDINSRLDEKTMGLIISNGHSRVPIYVGTPTNIIGAILGHSHMAV 264 (492)
Q Consensus 185 ~g~L~~~E~~iI~~vl~l~~~~V~diMtPr~~v~~l~~~~tl~~e~~~~i~~~~~SRiPV~~~~~d~IvGiv~~~d~m~~ 264 (492)
+|.++++|++++++++++.+.+|+|+|+|+.++++++.++++. ++++.+.+++++++||++++.++++|+|+.+|+++.
T Consensus 3 ~g~l~~~e~~~i~~~~~l~~~~v~diM~~~~~~~~v~~~~~~~-~a~~~m~~~~~~~~pVvd~~~~~lvGivt~~dl~~~ 81 (148)
T 3lv9_A 3 AGLIDESEQRLVDNIFEFEEKKIREIMVPRTDMVCIYESDSEE-KILAILKEEGVTRYPVCRKNKDDILGFVHIRDLYNQ 81 (148)
T ss_dssp ---------------CGGGTCBGGGTSEETTTCCCEETTCCHH-HHHHHHHHSCCSEEEEESSSTTSEEEEEEHHHHHHH
T ss_pred CCccCHHHHHHHHHHhccCCCCHHHccccHHHeEEECCCCCHH-HHHHHHHHCCCCEEEEEcCCCCcEEEEEEHHHHHHH
Confidence 5899999999999999999999999999999999999999998 999999999999999998655799999996665443
Q ss_pred HHHhhccchhhHHhhhccCCCcccccccchhhhhhccccccccccccCCCCCCCCcccchhhhhhhhhhhhhHHHHHHHH
Q 011147 265 VVKCKNDSKEIAEMEKSKAPMQHDININSNLKQRQGELKGNVQNEQFNAYMNSPSVISSDIDIQSSMAKSADLHLCLKKW 344 (492)
Q Consensus 265 vvk~l~~~~~~~~~~~~~~~v~~v~~~~~~~~~~~~~~~~~~~~~~vp~~~~~~~~~~~~l~~~~~~~~~~dl~~~l~~~ 344 (492)
+.+.. +.+++++ + ++ +..++.+. ++.++++.|
T Consensus 82 ~~~~~------------~~~v~~~-------------m-~~--~~~v~~~~--------------------~l~~~~~~m 113 (148)
T 3lv9_A 82 KINEN------------KIELEEI-------------L-RD--IIYISENL--------------------TIDKALERI 113 (148)
T ss_dssp HHHHS------------CCCGGGT-------------C-BC--CEEEETTS--------------------BHHHHHHHH
T ss_pred HhcCC------------CccHHHh-------------c-CC--CeEECCCC--------------------CHHHHHHHH
Confidence 32221 2233333 1 11 12234332 366789999
Q ss_pred hHcCcc-eEEecccCCCCCCCcEEEEechhHHHHHHccCcc
Q 011147 345 ERQDVK-ISKEELESLPSVDEEVIGIITLEDVMEELLQEEI 384 (492)
Q Consensus 345 ~~~~~~-~lVv~~~~~pde~g~vvGIITlEDViEeLlgeeI 384 (492)
.+++.+ ++|+ |++|+++||||.+|++++|+| ||
T Consensus 114 ~~~~~~~l~Vv------d~~g~~~Giit~~dil~~l~~-~i 147 (148)
T 3lv9_A 114 RKEKLQLAIVV------DEYGGTSGVVTIEDILEEIVG-EI 147 (148)
T ss_dssp HHHTCSEEEEE------CTTSSEEEEEEHHHHHHHHHH-TC
T ss_pred HhcCCeEEEEE------eCCCCEEEEEEHHHHHHHHhC-cC
Confidence 999999 9999 789999999999999999999 65
No 5
>3oco_A Hemolysin-like protein containing CBS domains; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; 2.20A {Oenococcus oeni}
Probab=99.81 E-value=2.3e-20 Score=168.13 Aligned_cols=147 Identities=21% Similarity=0.263 Sum_probs=107.6
Q ss_pred CChhHHHHHhhcccccccccccccccCcceEEEeCCCChHHHHHHHHHHcCCccceEE-eCCCCceEEEEEccchHHHHH
Q 011147 188 LTHDETTIITGALDMTQKTAKDAMTAMSKIFSLDINSRLDEKTMGLIISNGHSRVPIY-VGTPTNIIGAILGHSHMAVVV 266 (492)
Q Consensus 188 L~~~E~~iI~~vl~l~~~~V~diMtPr~~v~~l~~~~tl~~e~~~~i~~~~~SRiPV~-~~~~d~IvGiv~~~d~m~~vv 266 (492)
++++|+++++++++|.+.+|+++|+|+.++++++.++++. ++++.+.+++++++||+ +++.++++|+|+.+|+++.+.
T Consensus 3 l~~~e~~~i~~~~~l~~~~v~~iM~~~~~~~~v~~~~~~~-~a~~~m~~~~~~~~pVv~d~~~~~lvGivt~~dl~~~~~ 81 (153)
T 3oco_A 3 ADEEDANFMQRAFEMNDKVASDVMVDRTSMSVVDVDETIA-DALLLYLEEQYSRFPVTADNDKDKIIGYAYNYDIVRQAR 81 (153)
T ss_dssp -----CCHHHHHHHHHHCBHHHHSEEGGGCCCEETTSBHH-HHHHHHHHHCCSEEEEEETTEEEEEEEEEEHHHHHHHHH
T ss_pred cCHHHHHHHHHhcccCCCEeeeEecchhheEEEcCCCCHH-HHHHHHHhCCCCEEEEEECCCCCcEEEEEEHHHHHhHHh
Confidence 6788999999999999999999999999999999999998 99999999999999999 554578999999666544333
Q ss_pred HhhccchhhHHhhhccCCCcccccccchhhhhhccccccccccccCCCCCCCCcccchhhhhhhhhhhhhHHHHHHHHhH
Q 011147 267 KCKNDSKEIAEMEKSKAPMQHDININSNLKQRQGELKGNVQNEQFNAYMNSPSVISSDIDIQSSMAKSADLHLCLKKWER 346 (492)
Q Consensus 267 k~l~~~~~~~~~~~~~~~v~~v~~~~~~~~~~~~~~~~~~~~~~vp~~~~~~~~~~~~l~~~~~~~~~~dl~~~l~~~~~ 346 (492)
+.. +.+++++ + ++ +..++.+. ++.++++.|.+
T Consensus 82 ~~~------------~~~v~~~-------------m-~~--~~~v~~~~--------------------~l~~~~~~m~~ 113 (153)
T 3oco_A 82 IDD------------KAKISTI-------------M-RD--IVSVPENM--------------------KVPDVMEEMSA 113 (153)
T ss_dssp HHT------------TSBGGGT-------------C-BC--CEEEETTS--------------------BHHHHHHHHHH
T ss_pred cCC------------CCcHHHH-------------h-CC--CeEECCCC--------------------CHHHHHHHHHH
Confidence 221 2233333 1 11 12223332 36678999999
Q ss_pred cCcc-eEEecccCCCCCCCcEEEEechhHHHHHHccCccCCcCcc
Q 011147 347 QDVK-ISKEELESLPSVDEEVIGIITLEDVMEELLQEEILDETDD 390 (492)
Q Consensus 347 ~~~~-~lVv~~~~~pde~g~vvGIITlEDViEeLlgeeI~DEtD~ 390 (492)
++.+ ++|+ |++|+++||||+.|++++|+| +|.||+|+
T Consensus 114 ~~~~~lpVv------d~~g~~vGivt~~dil~~l~~-~~~de~~~ 151 (153)
T 3oco_A 114 HRVPMAIVI------DEYGGTSGIITDKDVYEELFG-NLRDEQDD 151 (153)
T ss_dssp TTCSCEEEE------CTTSCEEEEECHHHHHHHHHC---------
T ss_pred cCCcEEEEE------eCCCCEEEEeeHHHHHHHHhc-cCCCcccC
Confidence 9999 9999 789999999999999999999 99999886
No 6
>3lfr_A Putative metal ION transporter; CBS, AMP, PSI, MCSG, structural genomics, midwest center for structural genomics; HET: AMP; 1.53A {Pseudomonas syringae}
Probab=99.76 E-value=8.9e-19 Score=154.78 Aligned_cols=134 Identities=19% Similarity=0.317 Sum_probs=94.2
Q ss_pred cccccccccccCcceEEEeCCCChHHHHHHHHHHcCCccceEEeCCCCceEEEEEccchHHHHHHhhccchhhHHhhhcc
Q 011147 203 TQKTAKDAMTAMSKIFSLDINSRLDEKTMGLIISNGHSRVPIYVGTPTNIIGAILGHSHMAVVVKCKNDSKEIAEMEKSK 282 (492)
Q Consensus 203 ~~~~V~diMtPr~~v~~l~~~~tl~~e~~~~i~~~~~SRiPV~~~~~d~IvGiv~~~d~m~~vvk~l~~~~~~~~~~~~~ 282 (492)
++.+|+|+|+|+.++++++.++++. ++++.+.+++++++||++++.++++|+|+.+|+++.+.+. . ..+
T Consensus 1 ~~~~v~~iM~~~~~~~~v~~~~~v~-~a~~~m~~~~~~~~pVvd~~~~~~vGivt~~dl~~~~~~~---~-------~~~ 69 (136)
T 3lfr_A 1 ADLQVRDIMVPRSQMISIKATQTPR-EFLPAVIDAAHSRYPVIGESHDDVLGVLLAKDLLPLILKA---D-------GDS 69 (136)
T ss_dssp --CBHHHHSEEGGGCCCEETTCCHH-HHHHHHHHHCCSEEEEESSSTTCEEEEEEGGGGGGGGGSS---S-------GGG
T ss_pred CCCChHhccccHHHEEEEcCCCCHH-HHHHHHHhCCCCEEEEEcCCCCcEEEEEEHHHHHHHHHhc---c-------CCC
Confidence 3678999999999999999999998 9999999999999999986557999999977654322110 0 012
Q ss_pred CCCcccccccchhhhhhccccccccccccCCCCCCCCcccchhhhhhhhhhhhhHHHHHHHHhHcCcc-eEEecccCCCC
Q 011147 283 APMQHDININSNLKQRQGELKGNVQNEQFNAYMNSPSVISSDIDIQSSMAKSADLHLCLKKWERQDVK-ISKEELESLPS 361 (492)
Q Consensus 283 ~~v~~v~~~~~~~~~~~~~~~~~~~~~~vp~~~~~~~~~~~~l~~~~~~~~~~dl~~~l~~~~~~~~~-~lVv~~~~~pd 361 (492)
.+++++ ++. +..++.+. ++.++++.|++++.+ ++|+ |
T Consensus 70 ~~v~~~--------------m~~--~~~v~~~~--------------------~l~~~~~~m~~~~~~~~~Vv------d 107 (136)
T 3lfr_A 70 DDVKKL--------------LRP--ATFVPESK--------------------RLNVLLREFRANHNHMAIVI------D 107 (136)
T ss_dssp CCGGGT--------------CBC--CCEEETTC--------------------BHHHHHHHHHHHTCCEEEEE------C
T ss_pred cCHHHH--------------cCC--CeEECCCC--------------------cHHHHHHHHHhcCCeEEEEE------e
Confidence 233333 111 22234332 367789999999999 9999 7
Q ss_pred CCCcEEEEechhHHHHHHccCccCCcCcc
Q 011147 362 VDEEVIGIITLEDVMEELLQEEILDETDD 390 (492)
Q Consensus 362 e~g~vvGIITlEDViEeLlgeeI~DEtD~ 390 (492)
++|+++||||++|++++|+| ||.||+|+
T Consensus 108 ~~g~lvGiit~~Dil~~l~~-~~~de~~~ 135 (136)
T 3lfr_A 108 EYGGVAGLVTIEDVLEQIVG-DIEDEHDV 135 (136)
T ss_dssp TTSCEEEEEEHHHHHTTC-----------
T ss_pred CCCCEEEEEEHHHHHHHHhC-CCcCcccC
Confidence 89999999999999999999 99999885
No 7
>3k6e_A CBS domain protein; streptococcus pneumoniae TIGR4, structural genomics, PSI-2, protein structure initiative; 2.81A {Streptococcus pneumoniae}
Probab=99.73 E-value=8.9e-18 Score=152.98 Aligned_cols=147 Identities=16% Similarity=0.208 Sum_probs=100.0
Q ss_pred HHhhccc-ccccccccccccCcceEEEeCCCChHHHHHHHHHHcCCccceEEeCCCCceEEEEEccchHHHHHHhhccch
Q 011147 195 IITGALD-MTQKTAKDAMTAMSKIFSLDINSRLDEKTMGLIISNGHSRVPIYVGTPTNIIGAILGHSHMAVVVKCKNDSK 273 (492)
Q Consensus 195 iI~~vl~-l~~~~V~diMtPr~~v~~l~~~~tl~~e~~~~i~~~~~SRiPV~~~~~d~IvGiv~~~d~m~~vvk~l~~~~ 273 (492)
||.+.|+ |-..+++++|||+.++.+++.+++++ ++++.+.++|||++||+++ .++++|+|+.+|+++.+.+.....
T Consensus 4 mi~~~~e~~l~~~~~~iM~P~~~v~~v~~~~t~~-~a~~~m~~~~~s~~pVvd~-~~~lvGiit~~Di~~~~~~~~~~~- 80 (156)
T 3k6e_A 4 MIAKEFETFLLGQEETFLTPAKNLAVLIDTHNAD-HATLLLSQMTYTRVPVVTD-EKQFVGTIGLRDIMAYQMEHDLSQ- 80 (156)
T ss_dssp HHHHHHHHHHHTTGGGGEEETTSSCCEETTSBHH-HHHHHHTTSSSSEEEEECC--CBEEEEEEHHHHHHHHHHHTCCH-
T ss_pred hHHHHHHHHhhccHHHhCcchhHeEEECCcCCHH-HHHHHHHHcCCcEEEEEcC-CCcEEEEEEecchhhhhhhccccc-
Confidence 4444443 55678999999999999999999998 9999999999999999974 478999999777665554432111
Q ss_pred hhHHhhhccCCCcccccccchhhhhhccccccccccccCCCCCCCCcccchhhhhhhhhhhhhHHHHHHHHhHcCcceEE
Q 011147 274 EIAEMEKSKAPMQHDININSNLKQRQGELKGNVQNEQFNAYMNSPSVISSDIDIQSSMAKSADLHLCLKKWERQDVKISK 353 (492)
Q Consensus 274 ~~~~~~~~~~~v~~v~~~~~~~~~~~~~~~~~~~~~~vp~~~~~~~~~~~~l~~~~~~~~~~dl~~~l~~~~~~~~~~lV 353 (492)
+. ..+.++.++ +.++. ..++.+. ++.++++.|.+++. ++|
T Consensus 81 ---~~-~~~~~v~~i-------------m~~~~--~~v~~~~--------------------~l~~~~~~m~~~~~-lpV 120 (156)
T 3k6e_A 81 ---EI-MADTDIVHM-------------TKTDV--AVVSPDF--------------------TITEVLHKLVDESF-LPV 120 (156)
T ss_dssp ---HH-HTTSBGGGT-------------CBCSC--CCBCTTC--------------------CHHHHHHHTTTSSE-EEE
T ss_pred ---cc-ccccCHHHh-------------hcCCc--eeccccc--------------------HHHHHHHHHHHcCC-eEE
Confidence 00 112333333 11111 1123222 36678999986532 888
Q ss_pred ecccCCCCCCCcEEEEechhHHHHHHccCccCCcCccc
Q 011147 354 EELESLPSVDEEVIGIITLEDVMEELLQEEILDETDDY 391 (492)
Q Consensus 354 v~~~~~pde~g~vvGIITlEDViEeLlgeeI~DEtD~~ 391 (492)
+ |++|+++||||++||++++.+ .+.|..|+|
T Consensus 121 V------d~~g~l~GiiT~~Dil~~~~~-~~~~~~~e~ 151 (156)
T 3k6e_A 121 V------DAEGIFQGIITRKSILKAVNA-LLHDFSKEY 151 (156)
T ss_dssp E------CTTSBEEEEEEHHHHHHHHHH-HSCC-----
T ss_pred E------ecCCEEEEEEEHHHHHHHHHH-Hhcccchhh
Confidence 8 899999999999999999965 444444444
No 8
>3hf7_A Uncharacterized CBS-domain protein; CSB-domain PAIR, AMP, PSI, MCSG, STR genomics, midwest center for structural genomics; HET: AMP; 2.75A {Klebsiella pneumoniae subsp}
Probab=99.70 E-value=1.5e-17 Score=146.00 Aligned_cols=128 Identities=19% Similarity=0.254 Sum_probs=94.4
Q ss_pred ccccccccccCcceEEEeCCCChHHHHHHHHHHcCCccceEEeCCCCceEEEEEccchHHHHHHhhccchhhHHhhhccC
Q 011147 204 QKTAKDAMTAMSKIFSLDINSRLDEKTMGLIISNGHSRVPIYVGTPTNIIGAILGHSHMAVVVKCKNDSKEIAEMEKSKA 283 (492)
Q Consensus 204 ~~~V~diMtPr~~v~~l~~~~tl~~e~~~~i~~~~~SRiPV~~~~~d~IvGiv~~~d~m~~vvk~l~~~~~~~~~~~~~~ 283 (492)
+.+|+|+|+|+.++++++.++++. ++++.+.+++++++||++++.++++|+|+.+|+++.+.+.... ...
T Consensus 1 ~~~v~~iM~~~~~~~~v~~~~~v~-~a~~~m~~~~~~~~pVv~~~~~~lvGivt~~dl~~~~~~~~~~---------~~~ 70 (130)
T 3hf7_A 1 KVSVNDIMVPRNEIVGIDINDDWK-SIVRQLTHSPHGRIVLYRDSLDDAISMLRVREAYRLMTEKKEF---------TKE 70 (130)
T ss_dssp CCBHHHHSEEGGGCCEEETTSCHH-HHHHHHHTCSSSEEEEESSSGGGEEEEEEHHHHHHHHTSSSCC---------CHH
T ss_pred CcCHHHhCccHHHEEEEcCCCCHH-HHHHHHHHCCCCeEEEEcCCCCcEEEEEEHHHHHHHHhccCcc---------chh
Confidence 368999999999999999999998 9999999999999999976567899999966543332211000 000
Q ss_pred CCcccccccchhhhhhccccccccccccCCCCCCCCcccchhhhhhhhhhhhhHHHHHHHHhHcCcc-eEEecccCCCCC
Q 011147 284 PMQHDININSNLKQRQGELKGNVQNEQFNAYMNSPSVISSDIDIQSSMAKSADLHLCLKKWERQDVK-ISKEELESLPSV 362 (492)
Q Consensus 284 ~v~~v~~~~~~~~~~~~~~~~~~~~~~vp~~~~~~~~~~~~l~~~~~~~~~~dl~~~l~~~~~~~~~-~lVv~~~~~pde 362 (492)
+++ .++++ +.+++.+. ++.++++.|++++.+ ++|+ |+
T Consensus 71 ~v~--------------~~m~~--~~~v~~~~--------------------~l~~~~~~m~~~~~~~~~Vv------d~ 108 (130)
T 3hf7_A 71 IML--------------RAADE--IYFVPEGT--------------------PLSTQLVKFQRNKKKVGLVV------DE 108 (130)
T ss_dssp HHH--------------HHSBC--CCEEETTC--------------------BHHHHHHHHHHHCCCEEEEE------CT
T ss_pred hHH--------------HhccC--CeEeCCCC--------------------cHHHHHHHHHhcCCeEEEEE------cC
Confidence 111 12211 22234332 366789999999999 9999 78
Q ss_pred CCcEEEEechhHHHHHHccCcc
Q 011147 363 DEEVIGIITLEDVMEELLQEEI 384 (492)
Q Consensus 363 ~g~vvGIITlEDViEeLlgeeI 384 (492)
+|+++||||.+|++++|+| ||
T Consensus 109 ~g~lvGiit~~Dil~~l~g-~i 129 (130)
T 3hf7_A 109 YGDIQGLVTVEDILEEIVG-DF 129 (130)
T ss_dssp TSCEEEEEEHHHHHHHHHC---
T ss_pred CCCEEEEeeHHHHHHHHhC-CC
Confidence 9999999999999999999 65
No 9
>3jtf_A Magnesium and cobalt efflux protein; CBS domain, CORC, AMP, structural genomics, PSI-2, protein S initiative; HET: MSE AMP; 2.00A {Bordetella parapertussis}
Probab=99.69 E-value=7.9e-17 Score=140.75 Aligned_cols=126 Identities=23% Similarity=0.357 Sum_probs=96.0
Q ss_pred ccccccccccccCcceEEEeCCCChHHHHHHHHHHcCCccceEEeCCCCceEEEEEccchHHHHHHhhccchhhHHhhhc
Q 011147 202 MTQKTAKDAMTAMSKIFSLDINSRLDEKTMGLIISNGHSRVPIYVGTPTNIIGAILGHSHMAVVVKCKNDSKEIAEMEKS 281 (492)
Q Consensus 202 l~~~~V~diMtPr~~v~~l~~~~tl~~e~~~~i~~~~~SRiPV~~~~~d~IvGiv~~~d~m~~vvk~l~~~~~~~~~~~~ 281 (492)
..+.+|+|+|+|+.++++++.++++. ++++.+.+++++++||++++.++++|+|+.+|+++ .+.. .
T Consensus 2 ~~~~~v~diM~~~~~~~~v~~~~~~~-~a~~~m~~~~~~~~pVvd~~~~~~~Givt~~dl~~----~~~~---------~ 67 (129)
T 3jtf_A 2 NAERTVADIMVPRSRMDLLDISQPLP-QLLATIIETAHSRFPVYEDDRDNIIGILLAKDLLR----YMLE---------P 67 (129)
T ss_dssp --CCBHHHHCEEGGGCCCEETTSCHH-HHHHHHHHSCCSEEEEESSSTTCEEEEEEGGGGGG----GGTC---------T
T ss_pred CCCCCHHHhCccHHHeEEECCCCCHH-HHHHHHHHcCCCEEEEEcCCCCcEEEEEEHHHHHh----Hhcc---------C
Confidence 36789999999999999999999998 99999999999999999865579999999666532 2211 1
Q ss_pred cCCCcccccccchhhhhhccccccccccccCCCCCCCCcccchhhhhhhhhhhhhHHHHHHHHhHcCcc-eEEecccCCC
Q 011147 282 KAPMQHDININSNLKQRQGELKGNVQNEQFNAYMNSPSVISSDIDIQSSMAKSADLHLCLKKWERQDVK-ISKEELESLP 360 (492)
Q Consensus 282 ~~~v~~v~~~~~~~~~~~~~~~~~~~~~~vp~~~~~~~~~~~~l~~~~~~~~~~dl~~~l~~~~~~~~~-~lVv~~~~~p 360 (492)
+.+++++ ++. +..++.+. ++.++++.|.+++.+ ++|+
T Consensus 68 ~~~v~~~--------------m~~--~~~v~~~~--------------------~l~~~~~~m~~~~~~~~pVv------ 105 (129)
T 3jtf_A 68 ALDIRSL--------------VRP--AVFIPEVK--------------------RLNVLLREFRASRNHLAIVI------ 105 (129)
T ss_dssp TSCGGGG--------------CBC--CCEEETTC--------------------BHHHHHHHHHTSSCCEEEEE------
T ss_pred CcCHHHH--------------hCC--CeEeCCCC--------------------cHHHHHHHHHhcCCeEEEEE------
Confidence 2233333 111 22233332 367789999999999 9999
Q ss_pred CCCCcEEEEechhHHHHHHccCcc
Q 011147 361 SVDEEVIGIITLEDVMEELLQEEI 384 (492)
Q Consensus 361 de~g~vvGIITlEDViEeLlgeeI 384 (492)
|++|+++||||++|++++|+| ||
T Consensus 106 d~~g~~~Giit~~Dil~~l~g-ei 128 (129)
T 3jtf_A 106 DEHGGISGLVTMEDVLEQIVG-DI 128 (129)
T ss_dssp CC-CCEEEEEEHHHHHHHHHH-TC
T ss_pred eCCCCEEEEEEHHHHHHHHhC-CC
Confidence 788999999999999999999 65
No 10
>3i8n_A Uncharacterized protein VP2912; APC64273.1, vibrio parahaemolyticus RIMD 2210633, structural genomics, PSI-2; 2.15A {Vibrio parahaemolyticus}
Probab=99.69 E-value=4.2e-17 Score=142.54 Aligned_cols=128 Identities=16% Similarity=0.198 Sum_probs=94.9
Q ss_pred cccccccccccccCcceEEEeCCCChHHHHHHHHHHcCCccceEEeCCCCceEEEEEccchHHHHHHhhccchhhHHhhh
Q 011147 201 DMTQKTAKDAMTAMSKIFSLDINSRLDEKTMGLIISNGHSRVPIYVGTPTNIIGAILGHSHMAVVVKCKNDSKEIAEMEK 280 (492)
Q Consensus 201 ~l~~~~V~diMtPr~~v~~l~~~~tl~~e~~~~i~~~~~SRiPV~~~~~d~IvGiv~~~d~m~~vvk~l~~~~~~~~~~~ 280 (492)
+|.+.+|+|+|+|+.++++++.++++. ++++.+.+++++++||++++.++++|+|+.+|+++.+.+..
T Consensus 2 ~l~~~~v~~iM~~~~~v~~v~~~~~~~-~a~~~m~~~~~~~~pVvd~~~~~~~Givt~~dl~~~~~~~~----------- 69 (130)
T 3i8n_A 2 NAQDVPVTQVMTPRPVVFRVDATMTIN-EFLDKHKDTPFSRPLVYSEQKDNIIGFVHRLELFKMQQSGS----------- 69 (130)
T ss_dssp -----CCTTTSCCBCCCCEEETTSBHH-HHHHHTTTCSCSCCEEESSSTTCEEEECCHHHHHHHHHTTT-----------
T ss_pred CcCcCCHhhCCCcHHHEEEEcCCCCHH-HHHHHHHhCCCCEEEEEeCCCCcEEEEEEHHHHHHHHhcCC-----------
Confidence 478899999999999999999999998 99999999999999999865579999999665543332211
Q ss_pred ccCCCcccccccchhhhhhccccccccccccCCCCCCCCcccchhhhhhhhhhhhhHHHHHHHHhHcCcc-eEEecccCC
Q 011147 281 SKAPMQHDININSNLKQRQGELKGNVQNEQFNAYMNSPSVISSDIDIQSSMAKSADLHLCLKKWERQDVK-ISKEELESL 359 (492)
Q Consensus 281 ~~~~v~~v~~~~~~~~~~~~~~~~~~~~~~vp~~~~~~~~~~~~l~~~~~~~~~~dl~~~l~~~~~~~~~-~lVv~~~~~ 359 (492)
.+.+++++ +++ +..++.+. ++.++++.|.+++.+ ++|+
T Consensus 70 ~~~~v~~~--------------m~~--~~~v~~~~--------------------~l~~~~~~m~~~~~~~~~Vv----- 108 (130)
T 3i8n_A 70 GQKQLGAV--------------MRP--IQVVLNNT--------------------ALPKVFDQMMTHRLQLALVV----- 108 (130)
T ss_dssp TTSBHHHH--------------SEE--CCEEETTS--------------------CHHHHHHHHHHHTCCEEEEE-----
T ss_pred CcCCHHHH--------------hcC--CcCcCCCC--------------------cHHHHHHHHHHcCCeEEEEE-----
Confidence 12223332 111 12233332 366789999999999 9999
Q ss_pred CCCCCcEEEEechhHHHHHHccC
Q 011147 360 PSVDEEVIGIITLEDVMEELLQE 382 (492)
Q Consensus 360 pde~g~vvGIITlEDViEeLlge 382 (492)
|++|+++||||++|++++|+||
T Consensus 109 -d~~g~~vGivt~~dil~~l~ge 130 (130)
T 3i8n_A 109 -DEYGTVLGLVTLEDIFEHLVGE 130 (130)
T ss_dssp -CTTSCEEEEEEHHHHHHHHHTC
T ss_pred -cCCCCEEEEEEHHHHHHHHcCC
Confidence 7899999999999999999983
No 11
>3nqr_A Magnesium and cobalt efflux protein CORC; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics; HET: AMP; 2.00A {Salmonella typhimurium}
Probab=99.66 E-value=1.4e-16 Score=138.62 Aligned_cols=125 Identities=20% Similarity=0.305 Sum_probs=92.8
Q ss_pred cccccccccccCcceEEEeCCCChHHHHHHHHHHcCCccceEEeCCCCceEEEEEccchHHHHHHhhccchhhHHhhhcc
Q 011147 203 TQKTAKDAMTAMSKIFSLDINSRLDEKTMGLIISNGHSRVPIYVGTPTNIIGAILGHSHMAVVVKCKNDSKEIAEMEKSK 282 (492)
Q Consensus 203 ~~~~V~diMtPr~~v~~l~~~~tl~~e~~~~i~~~~~SRiPV~~~~~d~IvGiv~~~d~m~~vvk~l~~~~~~~~~~~~~ 282 (492)
++.+|+|+|+|+.++++++.++++. ++++.+.+++++++||++++.++++|+|+.+|+++. +... ..+
T Consensus 1 ~~~~v~diM~~~~~~~~v~~~~~~~-~a~~~m~~~~~~~~pVvd~~~~~~vGivt~~dl~~~----~~~~-------~~~ 68 (127)
T 3nqr_A 1 ADQRVRDIMIPRSQMITLKRNQTLD-ECLDVIIESAHSRFPVISEDKDHIEGILMAKDLLPF----MRSD-------AEA 68 (127)
T ss_dssp --CBHHHHSEEGGGCCCEETTCCHH-HHHHHHHHHCCSEEEEESSSTTCEEEEEEGGGGGGG----GSTT-------CCC
T ss_pred CCcCHHHhcccHHHeEEEcCCCCHH-HHHHHHHhCCCCEEEEEcCCCCcEEEEEEHHHHHHH----Hhcc-------CCC
Confidence 3678999999988899999999998 999999999999999998655799999997765332 2110 012
Q ss_pred CCCcccccccchhhhhhccccccccccccCCCCCCCCcccchhhhhhhhhhhhhHHHHHHHHhHcCcc-eEEecccCCCC
Q 011147 283 APMQHDININSNLKQRQGELKGNVQNEQFNAYMNSPSVISSDIDIQSSMAKSADLHLCLKKWERQDVK-ISKEELESLPS 361 (492)
Q Consensus 283 ~~v~~v~~~~~~~~~~~~~~~~~~~~~~vp~~~~~~~~~~~~l~~~~~~~~~~dl~~~l~~~~~~~~~-~lVv~~~~~pd 361 (492)
.+++++ ++. +..++.+. ++.++++.|.+++.+ ++|+ |
T Consensus 69 ~~v~~~--------------m~~--~~~v~~~~--------------------~l~~a~~~m~~~~~~~lpVv------d 106 (127)
T 3nqr_A 69 FSMDKV--------------LRT--AVVVPESK--------------------RVDRMLKEFRSQRYHMAIVI------D 106 (127)
T ss_dssp CCHHHH--------------CBC--CCEEETTC--------------------BHHHHHHHHHHTTCCEEEEE------C
T ss_pred CCHHHH--------------cCC--CeEECCCC--------------------cHHHHHHHHHhcCCeEEEEE------e
Confidence 223322 111 12233332 367789999999999 9999 7
Q ss_pred CCCcEEEEechhHHHHHHcc
Q 011147 362 VDEEVIGIITLEDVMEELLQ 381 (492)
Q Consensus 362 e~g~vvGIITlEDViEeLlg 381 (492)
++|+++||||++|++++|+|
T Consensus 107 ~~g~~~Giit~~dll~~l~g 126 (127)
T 3nqr_A 107 EFGGVSGLVTIEDILELIVG 126 (127)
T ss_dssp TTSCEEEEEEHHHHHHHC--
T ss_pred CCCCEEEEEEHHHHHHHHhC
Confidence 89999999999999999998
No 12
>3kxr_A Magnesium transporter, putative; cystathionine beta-synthase, Mg2+ transporter, structural GE PSI-2, protein structure initiative; 2.41A {Shewanella oneidensis mr-1}
Probab=99.56 E-value=4.6e-14 Score=134.27 Aligned_cols=146 Identities=10% Similarity=0.090 Sum_probs=111.9
Q ss_pred cCHHHHHHHHHhhccccCCCCCCChhHHHHHhhcccccccccccccccCcceEEEeCCCChHHHHHHHHHHc---CCccc
Q 011147 166 LRRAELKTLVDMHGNEAGKGGELTHDETTIITGALDMTQKTAKDAMTAMSKIFSLDINSRLDEKTMGLIISN---GHSRV 242 (492)
Q Consensus 166 ~s~eEL~~lv~~~~~e~~~~g~L~~~E~~iI~~vl~l~~~~V~diMtPr~~v~~l~~~~tl~~e~~~~i~~~---~~SRi 242 (492)
+.+++.+.++. .++++|++++++++.+.+.+|+++|+| ++++++.+.++. ++++.+.+. +++.+
T Consensus 25 l~~~~~~~~l~----------~l~~~e~~~i~~~l~~~~~~v~~iM~~--~~~~v~~~~tv~-eal~~~~~~~~~~~~~~ 91 (205)
T 3kxr_A 25 LPESFTDRALA----------QMGERQRQRFELYDQYSENEIGRYTDH--QMLVLSDKATVA-QAQRFFRRIELDCNDNL 91 (205)
T ss_dssp SCHHHHHHHHH----------HSCHHHHHHHHHHHHSCTTCGGGGCBC--CCCEEETTCBHH-HHHHHHHHCCCTTCCEE
T ss_pred CCHHHHHHHHH----------cCCHHHHHHHHHHhCCCcchHHhhccC--ceEEECCCCcHH-HHHHHHHhhCccCeeEE
Confidence 45566666665 268999999999999999999999997 788999999998 999999986 78899
Q ss_pred eEEeCCCCceEEEEEccchHHHHHHhhccchhhHHhhhccCCCcccccccchhhhhhccccccccccccCCCCCCCCccc
Q 011147 243 PIYVGTPTNIIGAILGHSHMAVVVKCKNDSKEIAEMEKSKAPMQHDININSNLKQRQGELKGNVQNEQFNAYMNSPSVIS 322 (492)
Q Consensus 243 PV~~~~~d~IvGiv~~~d~m~~vvk~l~~~~~~~~~~~~~~~v~~v~~~~~~~~~~~~~~~~~~~~~~vp~~~~~~~~~~ 322 (492)
||+++ .++++|+|+.+| +++.. .+.+++++ +.+. +.+++.+.
T Consensus 92 ~Vvd~-~~~lvGivt~~d----ll~~~-----------~~~~v~~i-------------m~~~--~~~v~~~~------- 133 (205)
T 3kxr_A 92 FIVDE-ADKYLGTVRRYD----IFKHE-----------PHEPLISL-------------LSED--SRALTANT------- 133 (205)
T ss_dssp EEECT-TCBEEEEEEHHH----HTTSC-----------TTSBGGGG-------------CCSS--CCCEETTS-------
T ss_pred EEEcC-CCeEEEEEEHHH----HHhCC-----------CcchHHHH-------------hcCC--CeEECCCC-------
Confidence 99974 578999998333 22211 12234443 2111 12234332
Q ss_pred chhhhhhhhhhhhhHHHHHHHHhHcCcc-eEEecccCCCCCCCcEEEEechhHHHHHHcc
Q 011147 323 SDIDIQSSMAKSADLHLCLKKWERQDVK-ISKEELESLPSVDEEVIGIITLEDVMEELLQ 381 (492)
Q Consensus 323 ~~l~~~~~~~~~~dl~~~l~~~~~~~~~-~lVv~~~~~pde~g~vvGIITlEDViEeLlg 381 (492)
++.++++.|++++.+ ++|+ |++|+++||||.+||++.+.+
T Consensus 134 -------------~l~~a~~~m~~~~~~~lpVV------D~~g~lvGiIT~~Dil~~i~~ 174 (205)
T 3kxr_A 134 -------------TLLDAAEAIEHSREIELPVI------DDAGELIGRVTLRAATALVRE 174 (205)
T ss_dssp -------------CHHHHHHHHHTSSCSEEEEE------CTTSBEEEEEEHHHHHHHHHH
T ss_pred -------------CHHHHHHHHHhcCCCEEEEE------cCCCeEEEEEEHHHHHHHHHH
Confidence 366789999999999 9999 789999999999999999975
No 13
>2yvy_A MGTE, Mg2+ transporter MGTE; membrane protein, transport protein; 2.30A {Thermus thermophilus} PDB: 2yvz_A
Probab=99.50 E-value=9.5e-14 Score=137.60 Aligned_cols=136 Identities=10% Similarity=0.129 Sum_probs=105.2
Q ss_pred CCCChhHHHHHhhcccccccccccccccCcceEEEeCCCChHHHHHHHHHHc-----CCccceEEeCCCCceEEEEEccc
Q 011147 186 GELTHDETTIITGALDMTQKTAKDAMTAMSKIFSLDINSRLDEKTMGLIISN-----GHSRVPIYVGTPTNIIGAILGHS 260 (492)
Q Consensus 186 g~L~~~E~~iI~~vl~l~~~~V~diMtPr~~v~~l~~~~tl~~e~~~~i~~~-----~~SRiPV~~~~~d~IvGiv~~~d 260 (492)
|.++..++..+.+++.+.+.+|+++|+| ++++++.+.++. ++++.+.++ +++++||++++ ++++|+|+.+|
T Consensus 116 ~~l~~~~~~~i~~~l~~~~~~v~~iM~~--~~~~v~~~~tv~-ea~~~~~~~~~~~~~~~~~~Vvd~~-~~lvGivt~~d 191 (278)
T 2yvy_A 116 DLLDPRTRAEVEALARYEEDEAGGLMTP--EYVAVREGMTVE-EVLRFLRRAAPDAETIYYIYVVDEK-GRLKGVLSLRD 191 (278)
T ss_dssp HHSCHHHHHHHHHHHHSCTTBGGGTCBS--CCCEECTTSBHH-HHHHHHHHHTTTCSCSSEEEEECTT-CBEEEEEEHHH
T ss_pred HcCCHHHHHHHHHHHCCCcchHHhhcCC--CceEECCCCcHH-HHHHHHHHccCCccceeEEEEECCC-CCEEEEEEHHH
Confidence 3578899999999999999999999997 788999999998 999999987 68999999753 78999998443
Q ss_pred hHHHHHHhhccchhhHHhhhccCCCcccccccchhhhhhccccccccccccCCCCCCCCcccchhhhhhhhhhhhhHHHH
Q 011147 261 HMAVVVKCKNDSKEIAEMEKSKAPMQHDININSNLKQRQGELKGNVQNEQFNAYMNSPSVISSDIDIQSSMAKSADLHLC 340 (492)
Q Consensus 261 ~m~~vvk~l~~~~~~~~~~~~~~~v~~v~~~~~~~~~~~~~~~~~~~~~~vp~~~~~~~~~~~~l~~~~~~~~~~dl~~~ 340 (492)
+++.. .+.+++++ +.+. +.+++.+. ++.++
T Consensus 192 ----ll~~~-----------~~~~v~~i-------------m~~~--~~~v~~~~--------------------~l~~a 221 (278)
T 2yvy_A 192 ----LIVAD-----------PRTRVAEI-------------MNPK--VVYVRTDT--------------------DQEEV 221 (278)
T ss_dssp ----HHHSC-----------TTCBSTTT-------------SBSS--CCCEETTS--------------------BHHHH
T ss_pred ----HhcCC-----------CCCcHHHH-------------hCCC--CeEEeCCC--------------------CHHHH
Confidence 23221 12344444 1111 12234332 36678
Q ss_pred HHHHhHcCcc-eEEecccCCCCCCCcEEEEechhHHHHHHcc
Q 011147 341 LKKWERQDVK-ISKEELESLPSVDEEVIGIITLEDVMEELLQ 381 (492)
Q Consensus 341 l~~~~~~~~~-~lVv~~~~~pde~g~vvGIITlEDViEeLlg 381 (492)
++.|++++.+ ++|+ |++|+++||||.+||++.+.+
T Consensus 222 ~~~m~~~~~~~lpVv------d~~g~lvGivT~~Dil~~i~~ 257 (278)
T 2yvy_A 222 ARLMADYDFTVLPVV------DEEGRLVGIVTVDDVLDVLEA 257 (278)
T ss_dssp HHHHHHHTCSEEEEE------CTTSBEEEEEEHHHHHHHC--
T ss_pred HHHHHhcCCCEEEEE------eCCCeEEEEEEHHHHHHHHHH
Confidence 9999999999 9999 789999999999999999987
No 14
>2zy9_A Mg2+ transporter MGTE; membrane protien, metal transport; 2.94A {Thermus thermophilus} PDB: 2yvx_A
Probab=99.48 E-value=1.6e-13 Score=146.50 Aligned_cols=153 Identities=10% Similarity=0.118 Sum_probs=118.3
Q ss_pred ccCHHHHHHHHHhhccccCCC---------CCCChhHHHHHhhcccccccccccccccCcceEEEeCCCChHHHHHHHHH
Q 011147 165 LLRRAELKTLVDMHGNEAGKG---------GELTHDETTIITGALDMTQKTAKDAMTAMSKIFSLDINSRLDEKTMGLII 235 (492)
Q Consensus 165 ~~s~eEL~~lv~~~~~e~~~~---------g~L~~~E~~iI~~vl~l~~~~V~diMtPr~~v~~l~~~~tl~~e~~~~i~ 235 (492)
.++.+|+..+++.. .++ +.++.+|++.+++++++.+.+|+++|+| ++++++.++++. ++++.+.
T Consensus 110 ~l~~dd~~~ll~~l----~~~~~~~~~~ll~~l~~~~~~~i~~~l~~~~~~v~~iM~~--~~v~v~~~~tv~-ea~~~~~ 182 (473)
T 2zy9_A 110 ELSLDDLADALQAV----RKEDPAYFQRLKDLLDPRTRAEVEALARYEEDEAGGLMTP--EYVAVREGMTVE-EVLRFLR 182 (473)
T ss_dssp HSCHHHHHHHHHHH----HHSCHHHHHHHTTSSCHHHHHHHHHHHTSCTTBSTTTCBS--CEEEECTTCBHH-HHHHHHH
T ss_pred hCCHHHHHHHHHhC----CHhHHHHHHHHHhcCCHHHHHHHHHHhcCCCCCHHHhCCC--CceEeCCCCcHH-HHHHHHH
Confidence 35677888777742 223 6899999999999999999999999997 899999999998 9999999
Q ss_pred Hc-----CCccceEEeCCCCceEEEEEccchHHHHHHhhccchhhHHhhhccCCCcccccccchhhhhhccccccccccc
Q 011147 236 SN-----GHSRVPIYVGTPTNIIGAILGHSHMAVVVKCKNDSKEIAEMEKSKAPMQHDININSNLKQRQGELKGNVQNEQ 310 (492)
Q Consensus 236 ~~-----~~SRiPV~~~~~d~IvGiv~~~d~m~~vvk~l~~~~~~~~~~~~~~~v~~v~~~~~~~~~~~~~~~~~~~~~~ 310 (492)
++ +++++||++++ ++++|+|+.+|+ ++.. .+.+++++ +.+. +.+
T Consensus 183 ~~~~~~~~~~~ipVvd~~-~~lvGiVt~~Dl----l~~~-----------~~~~v~di-------------m~~~--~~~ 231 (473)
T 2zy9_A 183 RAAPDAETIYYIYVVDEK-GRLKGVLSLRDL----IVAD-----------PRTRVAEI-------------MNPK--VVY 231 (473)
T ss_dssp HHGGGCSEEEEEEEECTT-SBEEEEEEHHHH----HHSC-----------TTSBGGGT-------------SBSS--CCC
T ss_pred hccCCcCceeEEEEECCC-CcEEEEEEHHHH----hcCC-----------CCCcHHHH-------------hCCC--CeE
Confidence 87 47999999854 789999984432 3211 12344444 2111 222
Q ss_pred cCCCCCCCCcccchhhhhhhhhhhhhHHHHHHHHhHcCcc-eEEecccCCCCCCCcEEEEechhHHHHHHcc
Q 011147 311 FNAYMNSPSVISSDIDIQSSMAKSADLHLCLKKWERQDVK-ISKEELESLPSVDEEVIGIITLEDVMEELLQ 381 (492)
Q Consensus 311 vp~~~~~~~~~~~~l~~~~~~~~~~dl~~~l~~~~~~~~~-~lVv~~~~~pde~g~vvGIITlEDViEeLlg 381 (492)
++.+. ++.++++.|++++.+ ++|+ |++|+++||||.+|+++.+.+
T Consensus 232 v~~~~--------------------~l~ea~~~m~~~~~~~lpVV------De~g~lvGiIT~~Dil~~i~~ 277 (473)
T 2zy9_A 232 VRTDT--------------------DQEEVARLMADYDFTVLPVV------DEEGRLVGIVTVDDVLDVLEA 277 (473)
T ss_dssp EESSS--------------------BHHHHHHHHHHHTCSEEEEE------CTTSBEEEEEEHHHHHHHHHH
T ss_pred EeCCC--------------------cHHHHHHHHHhcCCcEEEEE------cCCCEEEEEEehHhhHHHHHH
Confidence 34443 366789999999999 9999 899999999999999999976
No 15
>2qrd_G Protein C1556.08C; AMPK, ADP, ATP-binding, kinase, nucleotide-binding, serine/T protein kinase, transferase, CBS domain; HET: ADP ATP; 2.41A {Schizosaccharomyces pombe} PDB: 2qrc_G* 2qr1_G* 2qre_G* 2oox_G* 2ooy_G*
Probab=99.48 E-value=8.4e-14 Score=139.94 Aligned_cols=162 Identities=11% Similarity=0.140 Sum_probs=109.4
Q ss_pred CCCChhHHHHHhhcccc-cccccccccccCcceEEEeCCCChHHHHHHHHHHcCCccceEEeCCCCceEEEEEccchHHH
Q 011147 186 GELTHDETTIITGALDM-TQKTAKDAMTAMSKIFSLDINSRLDEKTMGLIISNGHSRVPIYVGTPTNIIGAILGHSHMAV 264 (492)
Q Consensus 186 g~L~~~E~~iI~~vl~l-~~~~V~diMtPr~~v~~l~~~~tl~~e~~~~i~~~~~SRiPV~~~~~d~IvGiv~~~d~m~~ 264 (492)
+.++++|+++++++++| ++.+|+|+|+|+.++++++.++++. ++++.+.+++|+++|||+++.++++|+|+.+|++..
T Consensus 2 ~~~~~~~~~~~~~~~~~l~~~~v~dim~~~~~vv~v~~~~tv~-~a~~~~~~~~~~~~pV~d~~~~~~vGiv~~~Dl~~~ 80 (334)
T 2qrd_G 2 MDVQETQKGALKEIQAFIRSRTSYDVLPTSFRLIVFDVTLFVK-TSLSLLTLNNIVSAPLWDSEANKFAGLLTMADFVNV 80 (334)
T ss_dssp CSHHHHHHHHHHHHHHHHHHSBGGGGSCSEEEEEEEETTSBHH-HHHHHHHHHTCSCEEEEETTTTEEEEEECHHHHHHH
T ss_pred CCCchHHHHHHHHHHHHHhcCchhhhCCCCCCEEEEcCCCCHH-HHHHHHHHcCCeEEEEEeCCCCeEEEEEEHHHHHHH
Confidence 34668899999999995 5599999999999999999999998 999999999999999999777899999997766544
Q ss_pred HHHhhccchhhHHh--hhccCCCcccccccchhhhhhccccccccccccCCCCCCCCcccchhhhhhhhhhhhhHHHHHH
Q 011147 265 VVKCKNDSKEIAEM--EKSKAPMQHDININSNLKQRQGELKGNVQNEQFNAYMNSPSVISSDIDIQSSMAKSADLHLCLK 342 (492)
Q Consensus 265 vvk~l~~~~~~~~~--~~~~~~v~~v~~~~~~~~~~~~~~~~~~~~~~vp~~~~~~~~~~~~l~~~~~~~~~~dl~~~l~ 342 (492)
+........ .++. ...+.+++.+..+ -...+.+....+.++.+. ++.++++
T Consensus 81 ~~~~~~~~~-~~~~~~~~~~~~~~~i~~~------l~~im~~~~~~~~v~~~~--------------------~~~~a~~ 133 (334)
T 2qrd_G 81 IKYYYQSSS-FPEAIAEIDKFRLLGLREV------ERKIGAIPPETIYVHPMH--------------------SLMDACL 133 (334)
T ss_dssp HHHHHHHCS-CGGGGGGGGSCBHHHHHHH------HHHHTCSCSSCCCBCTTS--------------------BHHHHHH
T ss_pred HHHHhhccC-CccHHHHHhhhchhhHHHH------HHhhccCCCceeeeCCCC--------------------cHHHHHH
Confidence 432211000 0000 0001111111000 000011111012233332 2667899
Q ss_pred HHhHcCcc-eEEecccCCCCCCCc-----EEEEechhHHHHHHcc
Q 011147 343 KWERQDVK-ISKEELESLPSVDEE-----VIGIITLEDVMEELLQ 381 (492)
Q Consensus 343 ~~~~~~~~-~lVv~~~~~pde~g~-----vvGIITlEDViEeLlg 381 (492)
.|++.+.+ ++|+ |++|+ ++|+||.+|+++.+.+
T Consensus 134 ~~~~~~~~~~~Vv------d~~~~~~~~~~~Givt~~dl~~~~~~ 172 (334)
T 2qrd_G 134 AMSKSRARRIPLI------DVDGETGSEMIVSVLTQYRILKFISM 172 (334)
T ss_dssp HHHHSCCSEEEEE------EEETTTTEEEEEEEEEHHHHHHHHHH
T ss_pred HHHHCCceEEEEE------eCCCCcCccceEEEeeHHHHHHHHHh
Confidence 99999998 9999 56654 9999999999999875
No 16
>4esy_A CBS domain containing membrane protein; structural genomics, PSI-biology; 2.01A {Sphaerobacter thermophilus}
Probab=99.47 E-value=8.3e-14 Score=127.31 Aligned_cols=145 Identities=16% Similarity=0.169 Sum_probs=96.9
Q ss_pred HHHHHhhcccccccccccccccCcceEEEeCCCChHHHHHHHHHHcCCccceEEeCCCCceEEEEEccchHHHHHHhhcc
Q 011147 192 ETTIITGALDMTQKTAKDAMTAMSKIFSLDINSRLDEKTMGLIISNGHSRVPIYVGTPTNIIGAILGHSHMAVVVKCKND 271 (492)
Q Consensus 192 E~~iI~~vl~l~~~~V~diMtPr~~v~~l~~~~tl~~e~~~~i~~~~~SRiPV~~~~~d~IvGiv~~~d~m~~vvk~l~~ 271 (492)
+++.+.+. +++.+|+|+|++ ++++++.++++. ++++.+.+++++++||+++ .++++|+|+.+|+++.+......
T Consensus 7 ~~~~~~~~--l~~~~V~diM~~--~v~~v~~~~tl~-~a~~~m~~~~~~~~pVvd~-~g~lvGiit~~Dll~~~~~~~~~ 80 (170)
T 4esy_A 7 RRRAIARA--IRQVPIRDILTS--PVVTVREDDTLD-AVAKTMLEHQIGCAPVVDQ-NGHLVGIITESDFLRGSIPFWIY 80 (170)
T ss_dssp HHHHHHHH--HHTSBGGGGCCS--CCCCEETTSBHH-HHHHHHHHTTCSEEEEECT-TSCEEEEEEGGGGGGGTCCTTHH
T ss_pred HHHHHHHH--HcCCCHHHhcCC--CCcEECCcCcHH-HHHHHHHHcCCeEEEEEcC-CccEEEEEEHHHHHHHHhhcccc
Confidence 44445544 468899999985 789999999998 9999999999999999975 47899999988765432211100
Q ss_pred chhhH-------------HhhhccCCCcccccccchhhhhhccccccccccccCCCCCCCCcccchhhhhhhhhhhhhHH
Q 011147 272 SKEIA-------------EMEKSKAPMQHDININSNLKQRQGELKGNVQNEQFNAYMNSPSVISSDIDIQSSMAKSADLH 338 (492)
Q Consensus 272 ~~~~~-------------~~~~~~~~v~~v~~~~~~~~~~~~~~~~~~~~~~vp~~~~~~~~~~~~l~~~~~~~~~~dl~ 338 (492)
..... .....+.+++++ |.++. ..+..+ .++.
T Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~~v~~i-------------m~~~~--~tv~~~--------------------~~l~ 125 (170)
T 4esy_A 81 EASEILSRAIPAPEVEHLFETGRKLTASAV-------------MTQPV--VTAAPE--------------------DSVG 125 (170)
T ss_dssp HHHHHHTTTSCHHHHHHHHHHHTTCBHHHH-------------CBCCS--CCBCTT--------------------SBHH
T ss_pred chhhhhhhccchhhHHhhhccccccchhhh-------------cccCc--ccCCcc--------------------hhHH
Confidence 00000 000001111111 11111 111222 2377
Q ss_pred HHHHHHhHcCcc-eEEecccCCCCCCCcEEEEechhHHHHHHccCcc
Q 011147 339 LCLKKWERQDVK-ISKEELESLPSVDEEVIGIITLEDVMEELLQEEI 384 (492)
Q Consensus 339 ~~l~~~~~~~~~-~lVv~~~~~pde~g~vvGIITlEDViEeLlgeeI 384 (492)
+|++.|.+++.+ ++|+ | +|+++||||..||++.|+.+|-
T Consensus 126 ~a~~~m~~~~~~~lpVv------d-~g~lvGivt~~Dil~~l~~~~~ 165 (170)
T 4esy_A 126 SIADQMRRHGIHRIPVV------Q-DGVPVGIVTRRDLLKLLLLEES 165 (170)
T ss_dssp HHHHHHHHTTCSEEEEE------E-TTEEEEEEEHHHHTTTSCCC--
T ss_pred HHHHHHHHcCCcEEEEE------E-CCEEEEEEEHHHHHHHHHhccC
Confidence 889999999999 9999 4 6999999999999999998654
No 17
>2v8q_E 5'-AMP-activated protein kinase subunit gamma-1; phosphorylation, nucleotide-binding, serine/threonine-protei kinase, magnesium, CBS domain; HET: AMP; 2.10A {Rattus norvegicus} SCOP: d.37.1.1 d.37.1.1 PDB: 2v92_E* 2v9j_E* 2y8l_E* 2y8q_E* 2y94_E* 2ya3_E*
Probab=99.47 E-value=1.4e-13 Score=138.26 Aligned_cols=160 Identities=12% Similarity=0.169 Sum_probs=105.7
Q ss_pred CCCCCCChhHHHHHhhcccccccccccccccCcceEEEeCCCChHHHHHHHHHHcCCccceEEeCCCCceEEEEEccchH
Q 011147 183 GKGGELTHDETTIITGALDMTQKTAKDAMTAMSKIFSLDINSRLDEKTMGLIISNGHSRVPIYVGTPTNIIGAILGHSHM 262 (492)
Q Consensus 183 ~~~g~L~~~E~~iI~~vl~l~~~~V~diMtPr~~v~~l~~~~tl~~e~~~~i~~~~~SRiPV~~~~~d~IvGiv~~~d~m 262 (492)
+.+|.+.+.+++.+.+. |.+.+|+|+|+|+.++++++.++++. ++++.+.+++|+++||++++.++++|+|+.+|++
T Consensus 15 ~~~~~~~~~~~~~~~~~--l~~~~v~dim~p~~~v~~v~~~~~v~-~a~~~~~~~~~~~~pV~d~~~~~~vGivt~~Dll 91 (330)
T 2v8q_E 15 EHSQETPESNSSVYTTF--MKSHRCYDLIPTSSKLVVFDTSLQVK-KAFFALVTNGVRAAPLWDSKKQSFVGMLTITDFI 91 (330)
T ss_dssp --------CCSCHHHHH--HHHSBGGGGSCSEEEEEEEETTSBHH-HHHHHHHHHTCSEEEEEETTTTEEEEEEEHHHHH
T ss_pred hHhhhccchhhHHHHHH--HHcCcHhhhccCCCcEEEEeCCCcHH-HHHHHHHHcCCcEEEEEeCCCCeEEEEEEHHHHH
Confidence 34577888888888887 67889999999999999999999998 9999999999999999998768899999977766
Q ss_pred HHHHHhhccchhhHHhhhccCCCcccccccchhhhhhcc-ccccccccccCCCCCCCCcccchhhhhhhhhhhhhHHHHH
Q 011147 263 AVVVKCKNDSKEIAEMEKSKAPMQHDININSNLKQRQGE-LKGNVQNEQFNAYMNSPSVISSDIDIQSSMAKSADLHLCL 341 (492)
Q Consensus 263 ~~vvk~l~~~~~~~~~~~~~~~v~~v~~~~~~~~~~~~~-~~~~~~~~~vp~~~~~~~~~~~~l~~~~~~~~~~dl~~~l 341 (492)
+.+.+... .++. ......+. .+.. -....+. +.+. ...++.+. ++.+++
T Consensus 92 ~~l~~~~~----~~~~--~~~~l~~~-~~~~-~~~~~~~im~~~--~~~v~~~~--------------------~~~~a~ 141 (330)
T 2v8q_E 92 NILHRYYK----SALV--QIYELEEH-KIET-WREVYLQDSFKP--LVCISPNA--------------------SLFDAV 141 (330)
T ss_dssp HHHHHHHH----HHTT--TCCCGGGC-BHHH-HHHHHSSSSCCC--CCCBCTTS--------------------BHHHHH
T ss_pred HHHHHHHh----cccc--chhHHhhc-cHHH-HHHHHhhcccCC--ceEeCCCC--------------------CHHHHH
Confidence 54443211 1100 00000011 0000 0000011 1111 12223332 366789
Q ss_pred HHHhHcCcc-eEEecccCCCCC-CCcEEEEechhHHHHHHcc
Q 011147 342 KKWERQDVK-ISKEELESLPSV-DEEVIGIITLEDVMEELLQ 381 (492)
Q Consensus 342 ~~~~~~~~~-~lVv~~~~~pde-~g~vvGIITlEDViEeLlg 381 (492)
+.|.+++.+ ++|+ |+ +|+++|+||.+|+++.+.+
T Consensus 142 ~~~~~~~~~~~~Vv------d~~~~~~~Givt~~dl~~~~~~ 177 (330)
T 2v8q_E 142 SSLIRNKIHRLPVI------DPESGNTLYILTHKRILKFLKL 177 (330)
T ss_dssp HHHHHHTCSCEEEE------CTTTCCEEEEECHHHHHHHHHH
T ss_pred HHHHHCCCCeEEEE------eCCCCcEEEEEcHHHHHHHHHH
Confidence 999999999 9999 67 8999999999999998864
No 18
>3ctu_A CBS domain protein; structural genomics, PSI-2, protein structure initiative, midwest center for structural genomics, MCSG; 2.81A {Streptococcus pneumoniae TIGR4} PDB: 3k6e_A
Probab=99.45 E-value=1.9e-13 Score=122.54 Aligned_cols=146 Identities=14% Similarity=0.129 Sum_probs=100.2
Q ss_pred HhhcccccccccccccccCcceEEEeCCCChHHHHHHHHHHcCCccceEEeCCCCceEEEEEccchHHHHHHhhccchhh
Q 011147 196 ITGALDMTQKTAKDAMTAMSKIFSLDINSRLDEKTMGLIISNGHSRVPIYVGTPTNIIGAILGHSHMAVVVKCKNDSKEI 275 (492)
Q Consensus 196 I~~vl~l~~~~V~diMtPr~~v~~l~~~~tl~~e~~~~i~~~~~SRiPV~~~~~d~IvGiv~~~d~m~~vvk~l~~~~~~ 275 (492)
-.+..+|...+|+|+|+|+.++++++.++++. ++++.+.+++++++||+++ .++++|+|+.+|+++.+......
T Consensus 6 ~~~~~~l~~~~v~dim~p~~~~~~v~~~~~l~-~a~~~m~~~~~~~~~Vvd~-~~~~~Giit~~dl~~~~~~~~~~---- 79 (156)
T 3ctu_A 6 AKEFETFLLGQEETFLTPAKNLAVLIDTHNAD-HATLLLSQMTYTRVPVVTD-EKQFVGTIGLRDIMAYQMEHDLS---- 79 (156)
T ss_dssp HHHHHHHHHTTGGGGEEEGGGCCCEETTSBHH-HHHHHHTTCSSSEEEEECC--CBEEEEEEHHHHHHHHHHHTCC----
T ss_pred cHHHHHHHHHHHHHHcCcccCceEECCCCCHH-HHHHHHHHCCCceEeEECC-CCEEEEEEcHHHHHHHHHhcccc----
Confidence 34455678889999999999999999999998 9999999999999999974 37899999977665444332110
Q ss_pred HHhhhccCCCcccccccchhhhhhccccccccccccCCCCCCCCcccchhhhhhhhhhhhhHHHHHHHHhHcCcceEEec
Q 011147 276 AEMEKSKAPMQHDININSNLKQRQGELKGNVQNEQFNAYMNSPSVISSDIDIQSSMAKSADLHLCLKKWERQDVKISKEE 355 (492)
Q Consensus 276 ~~~~~~~~~v~~v~~~~~~~~~~~~~~~~~~~~~~vp~~~~~~~~~~~~l~~~~~~~~~~dl~~~l~~~~~~~~~~lVv~ 355 (492)
.....+.+++++ +.+. +..++.+. ++.++++.|.+++ +++|+
T Consensus 80 -~~~~~~~~v~~~-------------m~~~--~~~v~~~~--------------------~l~~a~~~~~~~~-~lpVv- 121 (156)
T 3ctu_A 80 -QEIMADTDIVHM-------------TKTD--VAVVSPDF--------------------TITEVLHKLVDES-FLPVV- 121 (156)
T ss_dssp -HHHHTTSBGGGG-------------CBCS--CCCBCSSC--------------------CHHHHHHHTTTSS-EEEEE-
T ss_pred -ccccccCcHHHh-------------ccCC--ceeeCCCC--------------------cHHHHHHHHHHcC-eEEEE-
Confidence 000112334433 1111 11123222 3667899998875 58888
Q ss_pred ccCCCCCCCcEEEEechhHHHHHHccCccCCcCccc
Q 011147 356 LESLPSVDEEVIGIITLEDVMEELLQEEILDETDDY 391 (492)
Q Consensus 356 ~~~~pde~g~vvGIITlEDViEeLlgeeI~DEtD~~ 391 (492)
|++|+++|+||..|+++.+.+ .+.+-.++|
T Consensus 122 -----d~~g~~~Giit~~dil~~l~~-~~~~~~~~~ 151 (156)
T 3ctu_A 122 -----DAEGIFQGIITRKSILKAVNA-LLHDFSKEY 151 (156)
T ss_dssp -----CTTSBEEEEEETTHHHHHHHH-HSCC-----
T ss_pred -----cCCCeEEEEEEHHHHHHHHHH-HHHhhchhh
Confidence 789999999999999999976 555544444
No 19
>3t4n_C Nuclear protein SNF4; CBS domain, nucleotide binding, cytosol, protein binding; HET: ADP; 2.30A {Saccharomyces cerevisiae} PDB: 3tdh_C* 3te5_C* 2qlv_C
Probab=99.44 E-value=1e-13 Score=138.71 Aligned_cols=158 Identities=11% Similarity=0.185 Sum_probs=113.1
Q ss_pred CCCCCChhHHHHHhhcccc-cccccccccccCcceEEEeCCCChHHHHHHHHHHcCCccceEEeCCCCceEEEEEccchH
Q 011147 184 KGGELTHDETTIITGALDM-TQKTAKDAMTAMSKIFSLDINSRLDEKTMGLIISNGHSRVPIYVGTPTNIIGAILGHSHM 262 (492)
Q Consensus 184 ~~g~L~~~E~~iI~~vl~l-~~~~V~diMtPr~~v~~l~~~~tl~~e~~~~i~~~~~SRiPV~~~~~d~IvGiv~~~d~m 262 (492)
+.|.++++|+++++++++| .+.+|+|+|+|+.++++++.++++. ++++.+.+++++++||++++.++++|+++.+|++
T Consensus 8 ~~~~~~~~~~~~~~~i~~~l~~~~~~d~m~~~~~~v~v~~~~sv~-~a~~~m~~~~~~~~pV~d~~~~~lvGilt~~Dl~ 86 (323)
T 3t4n_C 8 SQEKVSIEQQLAVESIRKFLNSKTSYDVLPVSYRLIVLDTSLLVK-KSLNVLLQNSIVSAPLWDSKTSRFAGLLTTTDFI 86 (323)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHSBHHHHSCSEEEEEEEETTSBHH-HHHHHHHHTTCSCEEEEETTTTEEEEEECHHHHH
T ss_pred CCCcccHHHHHHHHHHHHHHHhCchHhhCCCCCcEEEEcCCCcHH-HHHHHHHHcCCceEEEEeCCCCeEEEEEEHHHHH
Confidence 4577889999999999998 9999999999999999999999998 9999999999999999998778999999977665
Q ss_pred HHHHHhhccchhhHHhhhccCCCcccccccchhhhhhccccc-----cccccccCCCCCCCCcccchhhhhhhhhhhhhH
Q 011147 263 AVVVKCKNDSKEIAEMEKSKAPMQHDININSNLKQRQGELKG-----NVQNEQFNAYMNSPSVISSDIDIQSSMAKSADL 337 (492)
Q Consensus 263 ~~vvk~l~~~~~~~~~~~~~~~v~~v~~~~~~~~~~~~~~~~-----~~~~~~vp~~~~~~~~~~~~l~~~~~~~~~~dl 337 (492)
..+....... +. ...+++. . ......+.+ ....+.++.+. ++
T Consensus 87 ~~l~~~~~~~----~~---~~~l~~~-~-----~~~v~~i~~~~~~~~~~~v~v~~~~--------------------~l 133 (323)
T 3t4n_C 87 NVIQYYFSNP----DK---FELVDKL-Q-----LDGLKDIERALGVDQLDTASIHPSR--------------------PL 133 (323)
T ss_dssp HHHHHHHHCG----GG---GGGGGGC-B-----HHHHHHHHHHTTC----CCCBCTTS--------------------BH
T ss_pred HHHHHHHcCc----ch---hHHHHHH-H-----HHHHHHHHHHhCCCCCCceEeCCCC--------------------cH
Confidence 5443322110 00 0000000 0 000000000 01112223322 36
Q ss_pred HHHHHHHhHcCcc-eEEecccCCCCCCCc-----EEEEechhHHHHHHcc
Q 011147 338 HLCLKKWERQDVK-ISKEELESLPSVDEE-----VIGIITLEDVMEELLQ 381 (492)
Q Consensus 338 ~~~l~~~~~~~~~-~lVv~~~~~pde~g~-----vvGIITlEDViEeLlg 381 (492)
.++++.|.+++.+ ++|+ |++|+ ++|+||.+|+++.+.+
T Consensus 134 ~~a~~~m~~~~~~~lpVv------d~~~~~~~~~l~Givt~~di~~~l~~ 177 (323)
T 3t4n_C 134 FEACLKMLESRSGRIPLI------DQDEETHREIVVSVLTQYRILKFVAL 177 (323)
T ss_dssp HHHHHHHHHHTCSEEEEE------EECTTTCCEEEEEEEEHHHHHHHHHH
T ss_pred HHHHHHHHhCCeeEEEEE------ecCCCCCccceEEEecHHHHHHHHHh
Confidence 6789999999999 9999 56665 9999999999999875
No 20
>3fhm_A Uncharacterized protein ATU1752; CBS domain, prokaryotic, bound nucleotide, AMP, NADH, struct genomics, PSI-2; HET: AMP NAI; 2.70A {Agrobacterium tumefaciens str}
Probab=99.39 E-value=1.3e-12 Score=118.56 Aligned_cols=140 Identities=11% Similarity=0.145 Sum_probs=99.0
Q ss_pred hhcccccccccccccccC-cceEEEeCCCChHHHHHHHHHHcCCccceEEeCCCCceEEEEEccchHHHHHHhhccchhh
Q 011147 197 TGALDMTQKTAKDAMTAM-SKIFSLDINSRLDEKTMGLIISNGHSRVPIYVGTPTNIIGAILGHSHMAVVVKCKNDSKEI 275 (492)
Q Consensus 197 ~~vl~l~~~~V~diMtPr-~~v~~l~~~~tl~~e~~~~i~~~~~SRiPV~~~~~d~IvGiv~~~d~m~~vvk~l~~~~~~ 275 (492)
...-.+...+|+|+|+|+ .++.+++.++++. ++++.+.+++++++||+++ .++++|+|+.+|+++.+.+....
T Consensus 16 ~~~~~l~~~~v~dim~~~~~~~~~v~~~~~l~-~a~~~~~~~~~~~~~Vvd~-~~~~~Givt~~dl~~~~~~~~~~---- 89 (165)
T 3fhm_A 16 NLYFQGMATFVKDLLDRKGRDVVTVGPDVSIG-EAAGTLHAHKIGAVVVTDA-DGVVLGIFTERDLVKAVAGQGAA---- 89 (165)
T ss_dssp CCCCSSSSCBHHHHHHHHCSCCCEECTTSBHH-HHHHHHHHHTCSEEEEECT-TSCEEEEEEHHHHHHHHHHHGGG----
T ss_pred hhhHhhhhcCHHHHhccCCCCCeEECCCCCHH-HHHHHHHHcCCCEEEEEcC-CCeEEEEEEHHHHHHHHHhcCCc----
Confidence 344568889999999986 6788999999998 9999999999999999974 37899999977665554433100
Q ss_pred HHhhhccCCCcccccccchhhhhhccccccccccccCCCCCCCCcccchhhhhhhhhhhhhHHHHHHHHhHcCcc-eEEe
Q 011147 276 AEMEKSKAPMQHDININSNLKQRQGELKGNVQNEQFNAYMNSPSVISSDIDIQSSMAKSADLHLCLKKWERQDVK-ISKE 354 (492)
Q Consensus 276 ~~~~~~~~~v~~v~~~~~~~~~~~~~~~~~~~~~~vp~~~~~~~~~~~~l~~~~~~~~~~dl~~~l~~~~~~~~~-~lVv 354 (492)
..+.+++++ +.+. ...++.+ .++.++++.|.+.+.+ ++|+
T Consensus 90 ----~~~~~v~~~-------------m~~~--~~~v~~~--------------------~~l~~a~~~m~~~~~~~lpVv 130 (165)
T 3fhm_A 90 ----SLQQSVSVA-------------MTKN--VVRCQHN--------------------STTDQLMEIMTGGRFRHVPVE 130 (165)
T ss_dssp ----GGTSBGGGT-------------SBSS--CCCBCTT--------------------CBHHHHHHHHHHHTCSEEEEE
T ss_pred ----cccCCHHHH-------------hcCC--CeEECCC--------------------CcHHHHHHHHHHcCCCEEEEE
Confidence 112334443 1111 1112222 1367789999999988 9999
Q ss_pred cccCCCCCCCcEEEEechhHHHHHHccCccCCcCc
Q 011147 355 ELESLPSVDEEVIGIITLEDVMEELLQEEILDETD 389 (492)
Q Consensus 355 ~~~~~pde~g~vvGIITlEDViEeLlgeeI~DEtD 389 (492)
|+ |+++|+||..||++.+.+ ++.++.+
T Consensus 131 ------d~-g~~~Giit~~dil~~~~~-~~~~~~~ 157 (165)
T 3fhm_A 131 ------EN-GRLAGIISIGDVVKARIG-EIEAEAE 157 (165)
T ss_dssp ------ET-TEEEEEEEHHHHHHHTTC-C------
T ss_pred ------EC-CEEEEEEEHHHHHHHHHH-HHHHHHH
Confidence 66 999999999999999987 5554433
No 21
>2emq_A Hypothetical conserved protein; CBS domains, NPPSFA, national project on protein structural functional analyses; 2.50A {Geobacillus kaustophilus}
Probab=99.39 E-value=1.9e-12 Score=115.72 Aligned_cols=147 Identities=14% Similarity=0.128 Sum_probs=94.0
Q ss_pred HhhcccccccccccccccCcceEEEeCCCChHHHHHHHHHHcCCccceEEeCCCCceEEEEEccchHHHHHHhhccchhh
Q 011147 196 ITGALDMTQKTAKDAMTAMSKIFSLDINSRLDEKTMGLIISNGHSRVPIYVGTPTNIIGAILGHSHMAVVVKCKNDSKEI 275 (492)
Q Consensus 196 I~~vl~l~~~~V~diMtPr~~v~~l~~~~tl~~e~~~~i~~~~~SRiPV~~~~~d~IvGiv~~~d~m~~vvk~l~~~~~~ 275 (492)
..+...|.+.+|+|+|+|+.++.+++.++++. ++++.+.+++++++||+++ .++++|+|+.+|+ .+.+......
T Consensus 2 ~~~~~~l~~~~v~~im~~~~~~~~v~~~~~~~-~a~~~m~~~~~~~~pVvd~-~~~~~Givt~~dl----~~~~~~~~~~ 75 (157)
T 2emq_A 2 TWEHNEFMQMTVKPFLIPADKVAHVQPGNYLD-HALLVLTKTGYSAIPVLDT-SYKLHGLISMTMM----MDAILGLERI 75 (157)
T ss_dssp --------CCBSTTTCEEGGGSCCBCTTSBHH-HHHHHHHHSSSSEEEEECT-TCCEEEEEEHHHH----HHHSBCSSSB
T ss_pred chhHhhHhhCcHHhhccCCccceEECCCCcHH-HHHHHHHHCCceEEEEEcC-CCCEEEEeeHHHH----HHHHhccccc
Confidence 34566788999999999888889999999998 9999999999999999975 3789999995554 3333210000
Q ss_pred HHhhhccCCCcccccccchhhhhhccccccccccccCCCCCCCCcccchhhhhhhhhhhhhHHHHHHHHhHcCcceEEec
Q 011147 276 AEMEKSKAPMQHDININSNLKQRQGELKGNVQNEQFNAYMNSPSVISSDIDIQSSMAKSADLHLCLKKWERQDVKISKEE 355 (492)
Q Consensus 276 ~~~~~~~~~v~~v~~~~~~~~~~~~~~~~~~~~~~vp~~~~~~~~~~~~l~~~~~~~~~~dl~~~l~~~~~~~~~~lVv~ 355 (492)
........+++++ +.+. +..++.+. ++.++++.|.+.+. ++|+
T Consensus 76 ~~~~~~~~~v~~~-------------m~~~--~~~v~~~~--------------------~l~~a~~~m~~~~~-l~Vv- 118 (157)
T 2emq_A 76 EFERLETMKVEEV-------------MNRN--IPRLRLDD--------------------SLMKAVGLIVNHPF-VCVE- 118 (157)
T ss_dssp CGGGGGTCBGGGT-------------CBCC--CCEEETTS--------------------BHHHHHHHHHHSSE-EEEE-
T ss_pred chHHhcCCcHHHH-------------hCCC--CceecCCC--------------------cHHHHHHHHhhCCE-EEEE-
Confidence 0000012223322 1111 11123222 36778999999876 8898
Q ss_pred ccCCCCCCCcEEEEechhHHHHHHccCccCCcCccc
Q 011147 356 LESLPSVDEEVIGIITLEDVMEELLQEEILDETDDY 391 (492)
Q Consensus 356 ~~~~pde~g~vvGIITlEDViEeLlgeeI~DEtD~~ 391 (492)
|++|+++|+||..|+++.+.+ ...+..+.+
T Consensus 119 -----d~~g~~~Giit~~dil~~~~~-~~~~~~~~~ 148 (157)
T 2emq_A 119 -----NDDGYFAGIFTRREVLKQLNK-QLHRPNGGR 148 (157)
T ss_dssp -----CSSSSEEEEEEHHHHHHHHHH-TTCCC----
T ss_pred -----cCCCeEEEEEEHHHHHHHHHH-Hhhccccce
Confidence 788999999999999999987 554444443
No 22
>3lqn_A CBS domain protein; csgid, structural genomics, unknown function, center for structural genomics of infectious diseases; 1.80A {Bacillus anthracis} SCOP: d.37.1.0
Probab=99.38 E-value=8.8e-13 Score=117.19 Aligned_cols=134 Identities=16% Similarity=0.147 Sum_probs=94.4
Q ss_pred ccccccccccccccCcceEEEeCCCChHHHHHHHHHHcCCccceEEeCCCCceEEEEEccchHHHHHHhhccchhhHHhh
Q 011147 200 LDMTQKTAKDAMTAMSKIFSLDINSRLDEKTMGLIISNGHSRVPIYVGTPTNIIGAILGHSHMAVVVKCKNDSKEIAEME 279 (492)
Q Consensus 200 l~l~~~~V~diMtPr~~v~~l~~~~tl~~e~~~~i~~~~~SRiPV~~~~~d~IvGiv~~~d~m~~vvk~l~~~~~~~~~~ 279 (492)
-.|.+.+|+|+|+|..++.+++.++++. ++++.+.+++++++||+++ .++++|+|+.+|+ ++.+..........
T Consensus 10 ~~l~~~~v~~im~~~~~~~~v~~~~~l~-~a~~~~~~~~~~~~pVvd~-~~~~~Givt~~dl----~~~~~~~~~~~~~~ 83 (150)
T 3lqn_A 10 DEFQQIFVKDLMISSEKVAHVQIGNGLE-HALLVLVKSGYSAIPVLDP-MYKLHGLISTAMI----LDGILGLERIEFER 83 (150)
T ss_dssp HHHHHCBHHHHSEEGGGSCCBCTTSBHH-HHHHHHHHHTCSEEEEECT-TCBEEEEEEHHHH----HHHTBCSSSBCGGG
T ss_pred HhhhcCChhhcccCCCceEEECCCCcHH-HHHHHHHHcCCcEEEEECC-CCCEEEEEEHHHH----HHHHHhhcccchhH
Confidence 3478899999999988899999999998 9999999999999999975 3789999996654 33332110000000
Q ss_pred hccCCCcccccccchhhhhhccccccccccccCCCCCCCCcccchhhhhhhhhhhhhHHHHHHHHhHcCcceEEecccCC
Q 011147 280 KSKAPMQHDININSNLKQRQGELKGNVQNEQFNAYMNSPSVISSDIDIQSSMAKSADLHLCLKKWERQDVKISKEELESL 359 (492)
Q Consensus 280 ~~~~~v~~v~~~~~~~~~~~~~~~~~~~~~~vp~~~~~~~~~~~~l~~~~~~~~~~dl~~~l~~~~~~~~~~lVv~~~~~ 359 (492)
..+.++.++ +.+. +..++.+. ++.++++.|.+++. ++|+
T Consensus 84 ~~~~~v~~~-------------m~~~--~~~v~~~~--------------------~l~~a~~~~~~~~~-l~Vv----- 122 (150)
T 3lqn_A 84 LEEMKVEQV-------------MKQD--IPVLKLED--------------------SFAKALEMTIDHPF-ICAV----- 122 (150)
T ss_dssp GGGCBGGGT-------------CBSS--CCEEETTC--------------------BHHHHHHHHHHCSE-EEEE-----
T ss_pred HhcCCHHHH-------------hcCC--CceeCCCC--------------------CHHHHHHHHHhCCE-EEEE-----
Confidence 112233332 1111 11122222 36678999988776 8898
Q ss_pred CCCCCcEEEEechhHHHHHHcc
Q 011147 360 PSVDEEVIGIITLEDVMEELLQ 381 (492)
Q Consensus 360 pde~g~vvGIITlEDViEeLlg 381 (492)
|++|+++||||..|+++.+.+
T Consensus 123 -d~~g~~~Giit~~dil~~l~~ 143 (150)
T 3lqn_A 123 -NEDGYFEGILTRRAILKLLNK 143 (150)
T ss_dssp -CTTCBEEEEEEHHHHHHHHHH
T ss_pred -CCCCcEEEEEEHHHHHHHHHH
Confidence 789999999999999999976
No 23
>2yzi_A Hypothetical protein PH0107; sheet/helix/sheet/sheet/helix, structural genomics, unknown function, NPPSFA; 2.25A {Pyrococcus horikoshii} SCOP: d.37.1.1
Probab=99.35 E-value=4.1e-12 Score=111.06 Aligned_cols=132 Identities=16% Similarity=0.191 Sum_probs=93.8
Q ss_pred ccccccccccccccCcceEEEeCCCChHHHHHHHHHHcCCccceEEeCCCCceEEEEEccchHHHHHHhhccchhhHHhh
Q 011147 200 LDMTQKTAKDAMTAMSKIFSLDINSRLDEKTMGLIISNGHSRVPIYVGTPTNIIGAILGHSHMAVVVKCKNDSKEIAEME 279 (492)
Q Consensus 200 l~l~~~~V~diMtPr~~v~~l~~~~tl~~e~~~~i~~~~~SRiPV~~~~~d~IvGiv~~~d~m~~vvk~l~~~~~~~~~~ 279 (492)
+.|.+.+|+++|++ ++.+++.++++. ++++.+.+++++.+||+++ .++++|+|+.+|+ ++.....+.
T Consensus 2 ~~l~~~~v~~im~~--~~~~v~~~~~~~-~a~~~~~~~~~~~~~Vvd~-~~~~~Givt~~dl----~~~~~~~~~----- 68 (138)
T 2yzi_A 2 VMDMKAPIKVYMTK--KLLGVKPSTSVQ-EASRLMMEFDVGSLVVIND-DGNVVGFFTKSDI----IRRVIVPGL----- 68 (138)
T ss_dssp -CCTTSBGGGTCBC--CCCEECTTSBHH-HHHHHHHHHTCSEEEEECT-TSCEEEEEEHHHH----HHHTTTTCC-----
T ss_pred cchhhhhHHHHhcC--CCeEECCCCcHH-HHHHHHHHcCCCEEEEEcC-CCcEEEEEeHHHH----HHHHHhcCC-----
Confidence 46888999999985 778899999998 9999999999999999974 3789999995543 322111000
Q ss_pred hccCCCcccccccchhhhhhccccccccccccCCCCCCCCcccchhhhhhhhhhhhhHHHHHHHHhHcCcc-eEEecccC
Q 011147 280 KSKAPMQHDININSNLKQRQGELKGNVQNEQFNAYMNSPSVISSDIDIQSSMAKSADLHLCLKKWERQDVK-ISKEELES 358 (492)
Q Consensus 280 ~~~~~v~~v~~~~~~~~~~~~~~~~~~~~~~vp~~~~~~~~~~~~l~~~~~~~~~~dl~~~l~~~~~~~~~-~lVv~~~~ 358 (492)
..+.++.++ +.+. +..++.+. ++.++++.|.+++.+ + |+
T Consensus 69 ~~~~~v~~~-------------m~~~--~~~v~~~~--------------------~l~~~~~~m~~~~~~~l-Vv---- 108 (138)
T 2yzi_A 69 PYDIPVERI-------------MTRN--LITANVNT--------------------PLGEVLRKMAEHRIKHI-LI---- 108 (138)
T ss_dssp CTTSBGGGT-------------CBCS--CCEEETTS--------------------BHHHHHHHHHHHTCSEE-EE----
T ss_pred cccCCHHHH-------------hhCC--CeEECCCC--------------------cHHHHHHHHHhcCCCEE-EE----
Confidence 012233333 1111 11123222 367789999999998 8 98
Q ss_pred CCCCCCcEEEEechhHHHHHHccCccCCc
Q 011147 359 LPSVDEEVIGIITLEDVMEELLQEEILDE 387 (492)
Q Consensus 359 ~pde~g~vvGIITlEDViEeLlgeeI~DE 387 (492)
|++|+++|+||..|+++.+.+ ++..+
T Consensus 109 --d~~g~~~Giit~~dil~~~~~-~~~~~ 134 (138)
T 2yzi_A 109 --EEEGKIVGIFTLSDLLEASRR-RLETA 134 (138)
T ss_dssp --EETTEEEEEEEHHHHHHHHHC-CSCCC
T ss_pred --CCCCCEEEEEEHHHHHHHHHH-HHHhh
Confidence 678999999999999999986 65444
No 24
>4fry_A Putative signal-transduction protein with CBS DOM; CBS domain,ssgcid, structural genomics, niaid; HET: NAD AMP; 2.10A {Burkholderia ambifaria}
Probab=99.35 E-value=2.4e-12 Score=115.42 Aligned_cols=132 Identities=11% Similarity=0.211 Sum_probs=93.3
Q ss_pred cccccccccC----cceEEEeCCCChHHHHHHHHHHcCCccceEEeCCCCceEEEEEccchHHHHHHhhccchhhHHhhh
Q 011147 205 KTAKDAMTAM----SKIFSLDINSRLDEKTMGLIISNGHSRVPIYVGTPTNIIGAILGHSHMAVVVKCKNDSKEIAEMEK 280 (492)
Q Consensus 205 ~~V~diMtPr----~~v~~l~~~~tl~~e~~~~i~~~~~SRiPV~~~~~d~IvGiv~~~d~m~~vvk~l~~~~~~~~~~~ 280 (492)
++|+|+|+|+ .++.+++.++++. ++++.+.+++++++||.+ .++++|+|+.+|+++.+.+...+ .
T Consensus 7 ~~v~dim~~~~~~~~~~~~v~~~~~~~-~a~~~~~~~~~~~~~V~~--~~~~~Givt~~dl~~~~~~~~~~--------~ 75 (157)
T 4fry_A 7 TTVAQILKAKPDSGRTIYTVTKNDFVY-DAIKLMAEKGIGALLVVD--GDDIAGIVTERDYARKVVLQERS--------S 75 (157)
T ss_dssp CBHHHHHHHSTTTTCCCCEEETTSBHH-HHHHHHHHHTCSEEEEES--SSSEEEEEEHHHHHHHSGGGTCC--------S
T ss_pred HHHHHHHhcccccCCCCeEECCCCcHH-HHHHHHHHcCCCEEEEee--CCEEEEEEEHHHHHHHHHhccCC--------c
Confidence 5799999988 7889999999998 999999999999999964 47899999965543322211100 0
Q ss_pred ccCCCcccccccchhhhhhccccccccccccCCCCCCCCcccchhhhhhhhhhhhhHHHHHHHHhHcCcc-eEEecccCC
Q 011147 281 SKAPMQHDININSNLKQRQGELKGNVQNEQFNAYMNSPSVISSDIDIQSSMAKSADLHLCLKKWERQDVK-ISKEELESL 359 (492)
Q Consensus 281 ~~~~v~~v~~~~~~~~~~~~~~~~~~~~~~vp~~~~~~~~~~~~l~~~~~~~~~~dl~~~l~~~~~~~~~-~lVv~~~~~ 359 (492)
.+.+++++ +.+. ...++.+. ++.++++.|.+++.+ ++|+
T Consensus 76 ~~~~v~~~-------------m~~~--~~~v~~~~--------------------~l~~~~~~m~~~~~~~lpVv----- 115 (157)
T 4fry_A 76 KATRVEEI-------------MTAK--VRYVEPSQ--------------------STDECMALMTEHRMRHLPVL----- 115 (157)
T ss_dssp SSCBHHHH-------------SBSS--CCCBCTTS--------------------BHHHHHHHHHHHTCSEEEEE-----
T ss_pred cccCHHHH-------------cCCC--CcEECCCC--------------------cHHHHHHHHHHcCCCEEEEE-----
Confidence 12223222 1111 11122222 367889999999998 9999
Q ss_pred CCCCCcEEEEechhHHHHHHccCccCCcCcc
Q 011147 360 PSVDEEVIGIITLEDVMEELLQEEILDETDD 390 (492)
Q Consensus 360 pde~g~vvGIITlEDViEeLlgeeI~DEtD~ 390 (492)
| +|+++|+||..|+++.+.+ +..++.++
T Consensus 116 -d-~g~~~Giit~~dil~~l~~-~~~~~~~~ 143 (157)
T 4fry_A 116 -D-GGKLIGLISIGDLVKSVIA-DQQFTISQ 143 (157)
T ss_dssp -E-TTEEEEEEEHHHHHHHHHT-TCCCCCC-
T ss_pred -E-CCEEEEEEEHHHHHHHHHH-HHHhhHHH
Confidence 6 7999999999999999997 55554443
No 25
>2ef7_A Hypothetical protein ST2348; CBS-domain, structural genomics, NPPSFA, national project on structural and functional analyses; 2.10A {Sulfolobus tokodaii} SCOP: d.37.1.1
Probab=99.34 E-value=8.5e-12 Score=108.38 Aligned_cols=124 Identities=12% Similarity=0.192 Sum_probs=91.2
Q ss_pred ccccccccccccCcceEEEeCCCChHHHHHHHHHHcCCccceEEeCCCCceEEEEEccchHHHHHHhhccchhhHHhhhc
Q 011147 202 MTQKTAKDAMTAMSKIFSLDINSRLDEKTMGLIISNGHSRVPIYVGTPTNIIGAILGHSHMAVVVKCKNDSKEIAEMEKS 281 (492)
Q Consensus 202 l~~~~V~diMtPr~~v~~l~~~~tl~~e~~~~i~~~~~SRiPV~~~~~d~IvGiv~~~d~m~~vvk~l~~~~~~~~~~~~ 281 (492)
|++.+|+++|++ ++.+++.++++. ++++.+.+++++++||++ .++++|+|+.+|+++.+.+... .
T Consensus 1 l~~~~v~~im~~--~~~~v~~~~~~~-~a~~~~~~~~~~~~~Vvd--~~~~~Givt~~dl~~~~~~~~~----------~ 65 (133)
T 2ef7_A 1 MEEEIVKEYMKT--QVISVTKDAKLN-DIAKVMTEKNIGSVIVVD--GNKPVGIITERDIVKAIGKGKS----------L 65 (133)
T ss_dssp CCCCBGGGTSBC--SCCEEETTCBHH-HHHHHHHHHTCSEEEEEE--TTEEEEEEEHHHHHHHHHTTCC----------T
T ss_pred CCcccHHHhccC--CCEEECCCCcHH-HHHHHHHhcCCCEEEEEE--CCEEEEEEcHHHHHHHHhcCCC----------c
Confidence 467899999997 578899999998 999999999999999998 3789999996665433322110 1
Q ss_pred cCCCcccccccchhhhhhccccccccccccCCCCCCCCcccchhhhhhhhhhhhhHHHHHHHHhHcCcc-eEEecccCCC
Q 011147 282 KAPMQHDININSNLKQRQGELKGNVQNEQFNAYMNSPSVISSDIDIQSSMAKSADLHLCLKKWERQDVK-ISKEELESLP 360 (492)
Q Consensus 282 ~~~v~~v~~~~~~~~~~~~~~~~~~~~~~vp~~~~~~~~~~~~l~~~~~~~~~~dl~~~l~~~~~~~~~-~lVv~~~~~p 360 (492)
+.+++++ +.+. ...++.+. ++.++++.|.+++.+ ++|+
T Consensus 66 ~~~v~~~-------------~~~~--~~~v~~~~--------------------~l~~~~~~~~~~~~~~l~Vv------ 104 (133)
T 2ef7_A 66 ETKAEEF-------------MTAS--LITIREDS--------------------PITGALALMRQFNIRHLPVV------ 104 (133)
T ss_dssp TCBGGGT-------------SEEC--CCCEETTS--------------------BHHHHHHHHHHHTCSEEEEE------
T ss_pred ccCHHHH-------------cCCC--CEEECCCC--------------------CHHHHHHHHHHcCCCEEEEE------
Confidence 2233333 1111 11123222 367789999999998 9999
Q ss_pred CCCCcEEEEechhHHHHHHcc
Q 011147 361 SVDEEVIGIITLEDVMEELLQ 381 (492)
Q Consensus 361 de~g~vvGIITlEDViEeLlg 381 (492)
|++|+++|+||..|+++.+.+
T Consensus 105 d~~g~~~Giit~~dll~~~~~ 125 (133)
T 2ef7_A 105 DDKGNLKGIISIRDITRAIDD 125 (133)
T ss_dssp CTTSCEEEEEEHHHHHHHHHH
T ss_pred CCCCeEEEEEEHHHHHHHHHH
Confidence 788999999999999999865
No 26
>4gqw_A CBS domain-containing protein CBSX1, chloroplasti; thioredoxin, plant, protein binding; 2.20A {Arabidopsis thaliana}
Probab=99.33 E-value=2.2e-12 Score=113.99 Aligned_cols=132 Identities=14% Similarity=0.183 Sum_probs=91.6
Q ss_pred cccccccccccCcceEEEeCCCChHHHHHHHHHHcCCccceEEeCCCCceEEEEEccchHHHHHHhhccchh---hH--H
Q 011147 203 TQKTAKDAMTAMSKIFSLDINSRLDEKTMGLIISNGHSRVPIYVGTPTNIIGAILGHSHMAVVVKCKNDSKE---IA--E 277 (492)
Q Consensus 203 ~~~~V~diMtPr~~v~~l~~~~tl~~e~~~~i~~~~~SRiPV~~~~~d~IvGiv~~~d~m~~vvk~l~~~~~---~~--~ 277 (492)
...+|+|+|+|+.++++++.++++. ++++.+.+++++++||++++ ++++|+|+.+|++ +.+..... .. .
T Consensus 3 ~~~~v~~im~~~~~~~~v~~~~~~~-~a~~~~~~~~~~~~~Vvd~~-~~~~G~vt~~dl~----~~~~~~~~~~~~~~~~ 76 (152)
T 4gqw_A 3 GVYTVGEFMTKKEDLHVVKPTTTVD-EALELLVENRITGFPVIDED-WKLVGLVSDYDLL----ALDSGDSTWKTFNAVQ 76 (152)
T ss_dssp CCSBGGGTSEESTTCCCBCTTSBHH-HHHHHHHHTTCSEEEEECTT-CBEEEEEEHHHHT----TCC----CCHHHHHHH
T ss_pred ceEEhhhccCCCCCCeEECCCCcHH-HHHHHHHHcCCceEEEEeCC-CeEEEEEEHHHHH----HhhcccCcccchHHHH
Confidence 4578999999988899999999998 99999999999999999753 7899999955432 21110000 00 0
Q ss_pred ---hhhccCCCcccccccchhhhhhccccccccccccCCCCCCCCcccchhhhhhhhhhhhhHHHHHHHHhHcCcc-eEE
Q 011147 278 ---MEKSKAPMQHDININSNLKQRQGELKGNVQNEQFNAYMNSPSVISSDIDIQSSMAKSADLHLCLKKWERQDVK-ISK 353 (492)
Q Consensus 278 ---~~~~~~~v~~v~~~~~~~~~~~~~~~~~~~~~~vp~~~~~~~~~~~~l~~~~~~~~~~dl~~~l~~~~~~~~~-~lV 353 (492)
......++.++ +.+. +..++.+. ++.++++.|.+.+.+ ++|
T Consensus 77 ~~~~~~~~~~v~~~-------------m~~~--~~~v~~~~--------------------~l~~a~~~~~~~~~~~l~V 121 (152)
T 4gqw_A 77 KLLSKTNGKLVGDL-------------MTPA--PLVVEEKT--------------------NLEDAAKILLETKYRRLPV 121 (152)
T ss_dssp TC-----CCBHHHH-------------SEES--CCCEESSS--------------------BHHHHHHHHHHSSCCEEEE
T ss_pred HHHHHhccccHHHh-------------cCCC--ceEECCCC--------------------cHHHHHHHHHHCCCCEEEE
Confidence 00001122222 1111 11123222 367789999999998 999
Q ss_pred ecccCCCCCCCcEEEEechhHHHHHHcc
Q 011147 354 EELESLPSVDEEVIGIITLEDVMEELLQ 381 (492)
Q Consensus 354 v~~~~~pde~g~vvGIITlEDViEeLlg 381 (492)
+ |++|+++||||..|+++.+.+
T Consensus 122 v------d~~g~~~Giit~~dil~~~~~ 143 (152)
T 4gqw_A 122 V------DSDGKLVGIITRGNVVRAALQ 143 (152)
T ss_dssp E------CTTSBEEEEEEHHHHHHHHHC
T ss_pred E------CCCCcEEEEEEHHHHHHHHHh
Confidence 9 789999999999999999987
No 27
>2oux_A Magnesium transporter; 10001B, structural genomics, PSI-2, P structure initiative, nysgxrc; 2.16A {Enterococcus faecalis} SCOP: a.118.26.1 d.37.1.1
Probab=99.32 E-value=8.8e-12 Score=124.24 Aligned_cols=135 Identities=16% Similarity=0.200 Sum_probs=104.4
Q ss_pred CCChhHHHHHhhcccccccccccccccCcceEEEeCCCChHHHHHHHHHHc-----CCccceEEeCCCCceEEEEEccch
Q 011147 187 ELTHDETTIITGALDMTQKTAKDAMTAMSKIFSLDINSRLDEKTMGLIISN-----GHSRVPIYVGTPTNIIGAILGHSH 261 (492)
Q Consensus 187 ~L~~~E~~iI~~vl~l~~~~V~diMtPr~~v~~l~~~~tl~~e~~~~i~~~-----~~SRiPV~~~~~d~IvGiv~~~d~ 261 (492)
.++.+|+..+.+++.+.+.+|+++|++ ++++++.+.++. ++++.+.++ +++++||+++ .++++|+|+.+|
T Consensus 119 ~l~~~e~~~i~~ll~~~~~~v~~iM~~--~~~~v~~~~tv~-ea~~~~~~~~~~~~~~~~~pVvd~-~~~lvGivt~~d- 193 (286)
T 2oux_A 119 LLSSEEAGEIKELLHYEDETAGAIMTT--EFVSIVANQTVR-SAMYVLKNQADMAETIYYVYVVDQ-ENHLVGVISLRD- 193 (286)
T ss_dssp TSCHHHHHHHHHHTTSCTTBHHHHCBS--CCCEECSSSBHH-HHHHHHHHHCSSCSCCSEEEEECT-TCBEEEEEEHHH-
T ss_pred cCCHHHHHHHHHHhcCChHHHHHhCCC--CceEECCCCcHH-HHHHHHHHcccCccceeEEEEEcC-CCeEEEEEEHHH-
Confidence 578889999999999999999999996 788999999998 999999987 8899999975 378999998333
Q ss_pred HHHHHHhhccchhhHHhhhccCCCcccccccchhhhhhccccccccccccCCCCCCCCcccchhhhhhhhhhhhhHHHHH
Q 011147 262 MAVVVKCKNDSKEIAEMEKSKAPMQHDININSNLKQRQGELKGNVQNEQFNAYMNSPSVISSDIDIQSSMAKSADLHLCL 341 (492)
Q Consensus 262 m~~vvk~l~~~~~~~~~~~~~~~v~~v~~~~~~~~~~~~~~~~~~~~~~vp~~~~~~~~~~~~l~~~~~~~~~~dl~~~l 341 (492)
+++.. .+.+++++ +.+. +..++.+. ++.+++
T Consensus 194 ---ll~~~-----------~~~~v~~i-------------m~~~--~~~v~~~~--------------------~l~ea~ 224 (286)
T 2oux_A 194 ---LIVND-----------DDTLIADI-------------LNER--VISVHVGD--------------------DQEDVA 224 (286)
T ss_dssp ---HTTSC-----------TTSBHHHH-------------SBSC--CCCEETTS--------------------BHHHHH
T ss_pred ---HHcCC-----------CCCcHHHH-------------cCCC--CeeecCCC--------------------CHHHHH
Confidence 22211 12233333 1111 11123332 366789
Q ss_pred HHHhHcCcc-eEEecccCCCCCCCcEEEEechhHHHHHHcc
Q 011147 342 KKWERQDVK-ISKEELESLPSVDEEVIGIITLEDVMEELLQ 381 (492)
Q Consensus 342 ~~~~~~~~~-~lVv~~~~~pde~g~vvGIITlEDViEeLlg 381 (492)
+.|++++.+ ++|+ |++|+++||||..||++.+.+
T Consensus 225 ~~m~~~~~~~lpVV------d~~g~lvGiIT~~Dil~~i~~ 259 (286)
T 2oux_A 225 QTIRDYDFLAVPVT------DYDDHLLGIVTVDDIIDVIDD 259 (286)
T ss_dssp HHHHHHTCSEEEEE------CTTCBEEEEEEHHHHHHHHHH
T ss_pred HHHHHcCCcEEEEE------cCCCeEEEEEEHHHHHHHHHH
Confidence 999999999 9999 789999999999999999875
No 28
>2rc3_A CBS domain; in SITU proteolysis, BR, structural genomics, PSI-2, protein structure initiative; HET: NAD; 1.60A {Nitrosomonas europaea atcc 19718} SCOP: d.37.1.1
Probab=99.32 E-value=4.5e-12 Score=110.57 Aligned_cols=123 Identities=9% Similarity=0.181 Sum_probs=89.0
Q ss_pred ccccccccC-cceEEEeCCCChHHHHHHHHHHcCCccceEEeCCCCceEEEEEccchHHHHHHhhccchhhHHhhhccCC
Q 011147 206 TAKDAMTAM-SKIFSLDINSRLDEKTMGLIISNGHSRVPIYVGTPTNIIGAILGHSHMAVVVKCKNDSKEIAEMEKSKAP 284 (492)
Q Consensus 206 ~V~diMtPr-~~v~~l~~~~tl~~e~~~~i~~~~~SRiPV~~~~~d~IvGiv~~~d~m~~vvk~l~~~~~~~~~~~~~~~ 284 (492)
+|+|+|+|+ .++.+++.++++. ++++.+.+++++++||++ .++++|+|+.+|+ ++.+...+.. ..+.+
T Consensus 7 ~v~~im~~~~~~~~~v~~~~~~~-~a~~~~~~~~~~~~~Vvd--~~~~~Givt~~dl----~~~~~~~~~~----~~~~~ 75 (135)
T 2rc3_A 7 TVKHLLQEKGHTVVAIGPDDSVF-NAMQKMAADNIGALLVMK--DEKLVGILTERDF----SRKSYLLDKP----VKDTQ 75 (135)
T ss_dssp BHHHHHHHHCCCCCEECTTSBHH-HHHHHHHHHTCSEEEEEE--TTEEEEEEEHHHH----HHHGGGSSSC----GGGSB
T ss_pred eHHHHHhcCCCCcEEECCCCcHH-HHHHHHHhcCCCEEEEEE--CCEEEEEEehHHH----HHHHHHcCCC----cccCC
Confidence 899999987 7889999999998 999999999999999997 3789999996554 3222111000 01223
Q ss_pred CcccccccchhhhhhccccccccccccCCCCCCCCcccchhhhhhhhhhhhhHHHHHHHHhHcCcc-eEEecccCCCCCC
Q 011147 285 MQHDININSNLKQRQGELKGNVQNEQFNAYMNSPSVISSDIDIQSSMAKSADLHLCLKKWERQDVK-ISKEELESLPSVD 363 (492)
Q Consensus 285 v~~v~~~~~~~~~~~~~~~~~~~~~~vp~~~~~~~~~~~~l~~~~~~~~~~dl~~~l~~~~~~~~~-~lVv~~~~~pde~ 363 (492)
+.++ +.+. +..++.+. ++.++++.|.+.+.+ ++|+ | +
T Consensus 76 v~~~-------------m~~~--~~~v~~~~--------------------~l~~~~~~m~~~~~~~lpVv------d-~ 113 (135)
T 2rc3_A 76 VKEI-------------MTRQ--VAYVDLNN--------------------TNEDCMALITEMRVRHLPVL------D-D 113 (135)
T ss_dssp GGGT-------------SBCS--CCCBCTTC--------------------BHHHHHHHHHHHTCSEEEEE------E-T
T ss_pred HHHh-------------ccCC--CeEECCCC--------------------cHHHHHHHHHHhCCCEEEEE------e-C
Confidence 3333 1111 11122222 367889999999988 9999 6 7
Q ss_pred CcEEEEechhHHHHHHcc
Q 011147 364 EEVIGIITLEDVMEELLQ 381 (492)
Q Consensus 364 g~vvGIITlEDViEeLlg 381 (492)
|+++|+||..|+++.+.+
T Consensus 114 g~~~Giit~~dll~~~~~ 131 (135)
T 2rc3_A 114 GKVIGLLSIGDLVKDAIS 131 (135)
T ss_dssp TEEEEEEEHHHHHHHHHC
T ss_pred CEEEEEEEHHHHHHHHHh
Confidence 999999999999999987
No 29
>3kpb_A Uncharacterized protein MJ0100; CBS domain, S-adenosylmethionine, conformational change, unknown function; HET: SAM; 1.60A {Methanocaldococcus jannaschii} SCOP: d.37.1.0 PDB: 3kpd_A* 3kpc_A*
Probab=99.32 E-value=7.9e-12 Score=106.77 Aligned_cols=119 Identities=14% Similarity=0.178 Sum_probs=87.5
Q ss_pred cccccccccCcceEEEeCCCChHHHHHHHHHHcCCccceEEeCCCCceEEEEEccchHHHHHHhhccchhhHHhhhccCC
Q 011147 205 KTAKDAMTAMSKIFSLDINSRLDEKTMGLIISNGHSRVPIYVGTPTNIIGAILGHSHMAVVVKCKNDSKEIAEMEKSKAP 284 (492)
Q Consensus 205 ~~V~diMtPr~~v~~l~~~~tl~~e~~~~i~~~~~SRiPV~~~~~d~IvGiv~~~d~m~~vvk~l~~~~~~~~~~~~~~~ 284 (492)
.+|+|+|++ ++.+++.++++. ++++.+.+++++++||+++ .++++|+|+.+|+++.+.+. ..+
T Consensus 1 ~~v~~im~~--~~~~v~~~~~~~-~a~~~~~~~~~~~~~Vvd~-~~~~~G~vt~~dl~~~~~~~-------------~~~ 63 (122)
T 3kpb_A 1 TLVKDILSK--PPITAHSNISIM-EAAKILIKHNINHLPIVDE-HGKLVGIITSWDIAKALAQN-------------KKT 63 (122)
T ss_dssp CBHHHHCCS--CCCCEETTSBHH-HHHHHHHHHTCSCEEEECT-TSBEEEEECHHHHHHHHHTT-------------CCB
T ss_pred CchHHhhCC--CCEEeCCCCcHH-HHHHHHHHcCCCeEEEECC-CCCEEEEEEHHHHHHHHHhc-------------ccC
Confidence 468999997 678899999998 9999999999999999974 47899999855543332211 113
Q ss_pred CcccccccchhhhhhccccccccccccCCCCCCCCcccchhhhhhhhhhhhhHHHHHHHHhHcCcc-eEEecccCCCCCC
Q 011147 285 MQHDININSNLKQRQGELKGNVQNEQFNAYMNSPSVISSDIDIQSSMAKSADLHLCLKKWERQDVK-ISKEELESLPSVD 363 (492)
Q Consensus 285 v~~v~~~~~~~~~~~~~~~~~~~~~~vp~~~~~~~~~~~~l~~~~~~~~~~dl~~~l~~~~~~~~~-~lVv~~~~~pde~ 363 (492)
+.++ +.+. +..++.+. ++.++++.|.+.+.+ ++|+ |++
T Consensus 64 v~~~-------------~~~~--~~~v~~~~--------------------~l~~~~~~~~~~~~~~l~Vv------d~~ 102 (122)
T 3kpb_A 64 IEEI-------------MTRN--VITAHEDE--------------------PVDHVAIKMSKYNISGVPVV------DDY 102 (122)
T ss_dssp GGGT-------------SBSS--CCCEETTS--------------------BHHHHHHHHHHHTCSEEEEE------CTT
T ss_pred HHHH-------------hcCC--CeEECCCC--------------------CHHHHHHHHHHhCCCeEEEE------CCC
Confidence 3333 1111 11123222 367789999999988 9999 788
Q ss_pred CcEEEEechhHHHHHHcc
Q 011147 364 EEVIGIITLEDVMEELLQ 381 (492)
Q Consensus 364 g~vvGIITlEDViEeLlg 381 (492)
|+++|+||..|+++.+.+
T Consensus 103 g~~~Givt~~dl~~~l~~ 120 (122)
T 3kpb_A 103 RRVVGIVTSEDISRLFGG 120 (122)
T ss_dssp CBEEEEEEHHHHHHHHC-
T ss_pred CCEEEEEeHHHHHHHhhc
Confidence 999999999999999876
No 30
>2rih_A Conserved protein with 2 CBS domains; bateman domain, AMP binding protein, ligand-BIND protein; 2.10A {Pyrobaculum aerophilum} SCOP: d.37.1.1 PDB: 2rif_A
Probab=99.31 E-value=7.1e-12 Score=110.31 Aligned_cols=122 Identities=11% Similarity=0.172 Sum_probs=89.1
Q ss_pred cccccccccCcceEEEeCCCChHHHHHHHHHHcCCccceEEeCC-CCceEEEEEccchHHHHHHhhccchhhHHhhhccC
Q 011147 205 KTAKDAMTAMSKIFSLDINSRLDEKTMGLIISNGHSRVPIYVGT-PTNIIGAILGHSHMAVVVKCKNDSKEIAEMEKSKA 283 (492)
Q Consensus 205 ~~V~diMtPr~~v~~l~~~~tl~~e~~~~i~~~~~SRiPV~~~~-~d~IvGiv~~~d~m~~vvk~l~~~~~~~~~~~~~~ 283 (492)
.+|+|+|++ ++.+++.++++. ++++.+.+++++++||++++ .++++|+|+.+|+++.+.+... .+.
T Consensus 5 ~~v~~im~~--~~~~v~~~~~~~-~a~~~~~~~~~~~~~Vvd~~~~~~~~Givt~~dl~~~~~~~~~----------~~~ 71 (141)
T 2rih_A 5 IRTSELLKR--PPVSLPETATIR-EVATELAKNRVGLAVLTARDNPKRPVAVVSERDILRAVAQRLD----------LDG 71 (141)
T ss_dssp CBGGGGCCS--CCEEEETTCBHH-HHHHHHHHHTCSEEEEEETTEEEEEEEEEEHHHHHHHHHTTCC----------TTS
T ss_pred eEHHHHhcC--CCeEeCCCCcHH-HHHHHHHHcCCCEEEEEcCCCcceeEEEEEHHHHHHHHhcCCC----------CCC
Confidence 689999996 788999999998 99999999999999999863 1289999996665443332210 122
Q ss_pred CCcccccccchhhhhhccccccccccccCCCCCCCCcccchhhhhhhhhhhhhHHHHHHHHhHcCcc-eEEecccCCCCC
Q 011147 284 PMQHDININSNLKQRQGELKGNVQNEQFNAYMNSPSVISSDIDIQSSMAKSADLHLCLKKWERQDVK-ISKEELESLPSV 362 (492)
Q Consensus 284 ~v~~v~~~~~~~~~~~~~~~~~~~~~~vp~~~~~~~~~~~~l~~~~~~~~~~dl~~~l~~~~~~~~~-~lVv~~~~~pde 362 (492)
++.++ +.+. +..++.+ + +.++++.|.+.+.+ ++|+ |+
T Consensus 72 ~v~~~-------------m~~~--~~~v~~~-~--------------------l~~a~~~m~~~~~~~l~Vv------d~ 109 (141)
T 2rih_A 72 PAMPI-------------ANSP--ITVLDTD-P--------------------VHVAAEKMRRHNIRHVVVV------NK 109 (141)
T ss_dssp BSGGG-------------CBCC--CEEETTS-B--------------------HHHHHHHHHHHTCSEEEEE------CT
T ss_pred CHHHH-------------cCCC--CeEEcCC-C--------------------HHHHHHHHHHcCCeEEEEE------cC
Confidence 33333 1111 1112332 2 66789999999998 9999 78
Q ss_pred CCcEEEEechhHHHHHHcc
Q 011147 363 DEEVIGIITLEDVMEELLQ 381 (492)
Q Consensus 363 ~g~vvGIITlEDViEeLlg 381 (492)
+|+++|+||.+|+++++.+
T Consensus 110 ~g~~~Giit~~dll~~~~~ 128 (141)
T 2rih_A 110 NGELVGVLSIRDLCFERAI 128 (141)
T ss_dssp TSCEEEEEEHHHHHSCHHH
T ss_pred CCcEEEEEEHHHHHHHHHH
Confidence 8999999999999887754
No 31
>1yav_A Hypothetical protein BSU14130; cystathionine beta synthase (CBS) domain, structural genomics, protein structure initiative, PSI; 2.10A {Bacillus subtilis} SCOP: d.37.1.1
Probab=99.29 E-value=7.1e-12 Score=112.71 Aligned_cols=139 Identities=13% Similarity=0.155 Sum_probs=92.9
Q ss_pred cccccccccccccCcceEEEeCCCChHHHHHHHHHHcCCccceEEeCCCCceEEEEEccchHHHHHHhhccchhhHHhhh
Q 011147 201 DMTQKTAKDAMTAMSKIFSLDINSRLDEKTMGLIISNGHSRVPIYVGTPTNIIGAILGHSHMAVVVKCKNDSKEIAEMEK 280 (492)
Q Consensus 201 ~l~~~~V~diMtPr~~v~~l~~~~tl~~e~~~~i~~~~~SRiPV~~~~~d~IvGiv~~~d~m~~vvk~l~~~~~~~~~~~ 280 (492)
.+.+.+|+++|+|+.++.+++.++++. ++++.+.+++++++||++++ ++++|+|+.+|++ +.+...........
T Consensus 10 ~l~~~~v~~im~~~~~~~~v~~~~~l~-~a~~~m~~~~~~~~pVvd~~-~~lvGivt~~dl~----~~~~~~~~~~~~~~ 83 (159)
T 1yav_A 10 QLLEATVGQFMIEADKVAHVQVGNNLE-HALLVLTKTGYTAIPVLDPS-YRLHGLIGTNMIM----NSIFGLERIEFEKL 83 (159)
T ss_dssp -CTTCBHHHHSEEGGGSCCEETTCBHH-HHHHHHHHHCCSEEEEECTT-CBEEEEEEHHHHH----HHHBCSSSBCGGGT
T ss_pred HHhHhhHHHHhCCccceEEECCCCcHH-HHHHHHHhCCCcEEEEECCC-CCEEEEeEHHHHH----HHhhhhcccchhhh
Confidence 577899999999888899999999998 99999999999999999753 6899999966543 33221000000000
Q ss_pred ccCCCcccccccchhhhhhccccccccccccCCCCCCCCcccchhhhhhhhhhhhhHHHHHHHHhHcCcceEEecccCCC
Q 011147 281 SKAPMQHDININSNLKQRQGELKGNVQNEQFNAYMNSPSVISSDIDIQSSMAKSADLHLCLKKWERQDVKISKEELESLP 360 (492)
Q Consensus 281 ~~~~v~~v~~~~~~~~~~~~~~~~~~~~~~vp~~~~~~~~~~~~l~~~~~~~~~~dl~~~l~~~~~~~~~~lVv~~~~~p 360 (492)
...++.++ +.+. +..+..+ .++.++++.|.+.+. ++|+
T Consensus 84 ~~~~v~~~-------------m~~~--~~~v~~~--------------------~~l~~a~~~m~~~~~-lpVv------ 121 (159)
T 1yav_A 84 DQITVEEV-------------MLTD--IPRLHIN--------------------DPIMKGFGMVINNGF-VCVE------ 121 (159)
T ss_dssp TTSBHHHH-------------SBCS--CCEEETT--------------------SBHHHHHHHTTTCSE-EEEE------
T ss_pred ccCCHHHh-------------cCCC--CceEcCC--------------------CCHHHHHHHHHhCCE-EEEE------
Confidence 11122222 1111 1112222 236778999988765 8898
Q ss_pred CCCCcEEEEechhHHHHHHccCccCCcC
Q 011147 361 SVDEEVIGIITLEDVMEELLQEEILDET 388 (492)
Q Consensus 361 de~g~vvGIITlEDViEeLlgeeI~DEt 388 (492)
|++|+++|+||..|+++.+.+ ++.++.
T Consensus 122 d~~g~~vGiit~~dil~~~~~-~~~~~~ 148 (159)
T 1yav_A 122 NDEQVFEGIFTRRVVLKELNK-HIRSLN 148 (159)
T ss_dssp CTTCBEEEEEEHHHHHHHHHH-HC----
T ss_pred eCCCeEEEEEEHHHHHHHHHH-HHHhhc
Confidence 778999999999999999986 554443
No 32
>3fv6_A YQZB protein; CBS domain dimer, metabolism regulator, central glycolytic G regulator, transcription; 1.95A {Bacillus subtilis} PDB: 3fwr_A* 3fws_A*
Probab=99.29 E-value=1.4e-11 Score=111.10 Aligned_cols=127 Identities=9% Similarity=0.094 Sum_probs=90.3
Q ss_pred ccccccccccccCcceEEEeCCCChHHHHHHHHHHcCCccceEEeCCCCceEEEEEccchHHHHHHhhccchhhHHhhhc
Q 011147 202 MTQKTAKDAMTAMSKIFSLDINSRLDEKTMGLIISNGHSRVPIYVGTPTNIIGAILGHSHMAVVVKCKNDSKEIAEMEKS 281 (492)
Q Consensus 202 l~~~~V~diMtPr~~v~~l~~~~tl~~e~~~~i~~~~~SRiPV~~~~~d~IvGiv~~~d~m~~vvk~l~~~~~~~~~~~~ 281 (492)
|.+.+|+|+|++ . ++++.++++. ++++.+.+++++++||+++ .++++|+|+.+|+++.++.... ..
T Consensus 14 l~~~~v~~im~~--~-~~v~~~~~~~-~a~~~m~~~~~~~~~Vvd~-~~~~~Givt~~dl~~~~~~~~~---------~~ 79 (159)
T 3fv6_A 14 LKKLQVKDFQSI--P-VVIHENVSVY-DAICTMFLEDVGTLFVVDR-DAVLVGVLSRKDLLRASIGQQE---------LT 79 (159)
T ss_dssp HTTCBGGGSCBC--C-CEEETTSBHH-HHHHHHHHHTCSEEEEECT-TSCEEEEEEHHHHHHHHTSCSC---------TT
T ss_pred HhhCCHHHHcCC--C-EEECCCCcHH-HHHHHHHHCCCCEEEEEcC-CCcEEEEEeHHHHHHHhhccCc---------cc
Confidence 567899999985 3 4899999998 9999999999999999974 3789999996665443322110 11
Q ss_pred cCCCcccccccchhhhhhccccccccccccCCCCCCCCcccchhhhhhhhhhhhhHHHHHHHHhHcCcc-eEEecccCCC
Q 011147 282 KAPMQHDININSNLKQRQGELKGNVQNEQFNAYMNSPSVISSDIDIQSSMAKSADLHLCLKKWERQDVK-ISKEELESLP 360 (492)
Q Consensus 282 ~~~v~~v~~~~~~~~~~~~~~~~~~~~~~vp~~~~~~~~~~~~l~~~~~~~~~~dl~~~l~~~~~~~~~-~lVv~~~~~p 360 (492)
+.+++++ +.+......+..+ .++.++++.|.+.+.+ ++|+
T Consensus 80 ~~~v~~~-------------m~~~~~~~~v~~~--------------------~~l~~a~~~m~~~~~~~lpVv------ 120 (159)
T 3fv6_A 80 SVPVHII-------------MTRMPNITVCRRE--------------------DYVMDIAKHLIEKQIDALPVI------ 120 (159)
T ss_dssp TCBGGGT-------------SEETTSCCCBCTT--------------------SBHHHHHHHHHHHTCSEEEEE------
T ss_pred CcCHHHH-------------HcCCCCcEEECCC--------------------CCHHHHHHHHHHcCCcEEEEE------
Confidence 2334433 1110011112222 2367789999999999 9999
Q ss_pred CCCC---cEEEEechhHHHHHHcc
Q 011147 361 SVDE---EVIGIITLEDVMEELLQ 381 (492)
Q Consensus 361 de~g---~vvGIITlEDViEeLlg 381 (492)
|++| +++||||..||++.+..
T Consensus 121 d~~g~~~~~vGiit~~dil~~l~~ 144 (159)
T 3fv6_A 121 KDTDKGFEVIGRVTKTNMTKILVS 144 (159)
T ss_dssp EECSSSEEEEEEEEHHHHHHHHHH
T ss_pred eCCCcceeEEEEEEHHHHHHHHHH
Confidence 6777 99999999999999863
No 33
>3k2v_A Putative D-arabinose 5-phosphate isomerase; KPSF-like protein, CBS domain, structural genomics, PSI-2, P structure initiative; HET: MSE CMK; 1.95A {Klebsiella pneumoniae subsp} PDB: 3fna_A*
Probab=99.27 E-value=4.2e-12 Score=113.12 Aligned_cols=120 Identities=13% Similarity=0.153 Sum_probs=86.1
Q ss_pred cccccccccCcceEEEeCCCChHHHHHHHHHHcCCccceEEeCCCCceEEEEEccchHHHHHHhhccchhhHHhhhccCC
Q 011147 205 KTAKDAMTAMSKIFSLDINSRLDEKTMGLIISNGHSRVPIYVGTPTNIIGAILGHSHMAVVVKCKNDSKEIAEMEKSKAP 284 (492)
Q Consensus 205 ~~V~diMtPr~~v~~l~~~~tl~~e~~~~i~~~~~SRiPV~~~~~d~IvGiv~~~d~m~~vvk~l~~~~~~~~~~~~~~~ 284 (492)
.+|+|+|+|+.++.+++.++++. ++++.+.+++++++||++++ ++++|+|+.+|+++.+.+... ..+.+
T Consensus 28 ~~v~dim~~~~~~~~v~~~~~~~-~a~~~m~~~~~~~~~Vvd~~-~~~~Givt~~dl~~~~~~~~~---------~~~~~ 96 (149)
T 3k2v_A 28 LRVNDIMHTGDEIPHVGLQATLR-DALLEITRKNLGMTAICDDD-MNIIGIFTDGDLRRVFDTGVD---------MRDAS 96 (149)
T ss_dssp SBGGGTSBCGGGSCEECTTCBHH-HHHHHHHHHTSSEEEEECTT-CBEEEEEEHHHHHHHHCSSSC---------CTTCB
T ss_pred cCHHHHhcCCCCCeEECCCCcHH-HHHHHHHhCCCcEEEEECCC-CcEEEEecHHHHHHHHhcCCC---------cccCc
Confidence 58999999988899999999998 99999999999999999743 789999996655433321110 01222
Q ss_pred CcccccccchhhhhhccccccccccccCCCCCCCCcccchhhhhhhhhhhhhHHHHHHHHhHcCcc-eEEecccCCCCCC
Q 011147 285 MQHDININSNLKQRQGELKGNVQNEQFNAYMNSPSVISSDIDIQSSMAKSADLHLCLKKWERQDVK-ISKEELESLPSVD 363 (492)
Q Consensus 285 v~~v~~~~~~~~~~~~~~~~~~~~~~vp~~~~~~~~~~~~l~~~~~~~~~~dl~~~l~~~~~~~~~-~lVv~~~~~pde~ 363 (492)
++++ +.+. +..++.+. ++.++++.|.+++.+ ++|+ |++
T Consensus 97 v~~~-------------m~~~--~~~v~~~~--------------------~l~~a~~~m~~~~~~~lpVv------d~~ 135 (149)
T 3k2v_A 97 IADV-------------MTRG--GIRIRPGT--------------------LAVDALNLMQSRHITCVLVA------DGD 135 (149)
T ss_dssp HHHH-------------SEES--CCEECTTC--------------------BHHHHHHHHHHHTCSEEEEE------ETT
T ss_pred HHHH-------------cCCC--CeEECCCC--------------------CHHHHHHHHHHcCCCEEEEe------cCC
Confidence 3222 1111 11122222 367789999999998 9999 544
Q ss_pred CcEEEEechhHHHH
Q 011147 364 EEVIGIITLEDVME 377 (492)
Q Consensus 364 g~vvGIITlEDViE 377 (492)
+++||||..||++
T Consensus 136 -~~~Giit~~dil~ 148 (149)
T 3k2v_A 136 -HLLGVVHMHDLLR 148 (149)
T ss_dssp -EEEEEEEHHHHTC
T ss_pred -EEEEEEEHHHhhc
Confidence 9999999999974
No 34
>3sl7_A CBS domain-containing protein CBSX2; CBS-PAIR protein, redox regulator, plant CBS domain, thiored chloroplast, membrane protein; 1.91A {Arabidopsis thaliana}
Probab=99.27 E-value=6.7e-12 Score=114.35 Aligned_cols=135 Identities=13% Similarity=0.188 Sum_probs=90.4
Q ss_pred ccccccccccCcceEEEeCCCChHHHHHHHHHHcCCccceEEeCCCCceEEEEEccchHHHHHHhhcc---chhhHH---
Q 011147 204 QKTAKDAMTAMSKIFSLDINSRLDEKTMGLIISNGHSRVPIYVGTPTNIIGAILGHSHMAVVVKCKND---SKEIAE--- 277 (492)
Q Consensus 204 ~~~V~diMtPr~~v~~l~~~~tl~~e~~~~i~~~~~SRiPV~~~~~d~IvGiv~~~d~m~~vvk~l~~---~~~~~~--- 277 (492)
..+|+|+|+|+.++++++.++++. ++++.+.+++++++||+++ .++++|+|+.+|+++.....-.. ....+.
T Consensus 3 ~~~v~dim~~~~~~~~v~~~~~l~-~a~~~m~~~~~~~~pVvd~-~~~~~Givt~~dl~~~~~~~~~~~~~~~~~~~~~~ 80 (180)
T 3sl7_A 3 GYTVGDFMTPRQNLHVVKPSTSVD-DALELLVEKKVTGLPVIDD-NWTLVGVVSDYDLLALDSISGRSQNDTNLFPDVDS 80 (180)
T ss_dssp CCBHHHHSEEGGGCCCBCTTSBHH-HHHHHHHHHTCSEEEEECT-TCBEEEEEEHHHHTCC-------------------
T ss_pred ceeHHHhcCCCCCceeeCCCCcHH-HHHHHHHHcCCCeEEEECC-CCeEEEEEEHHHHHhhhhhccccCCcccccccccc
Confidence 368999999988899999999998 9999999999999999975 37899999965543211000000 000000
Q ss_pred ------------hhhccCCCcccccccchhhhhhccccccccccccCCCCCCCCcccchhhhhhhhhhhhhHHHHHHHHh
Q 011147 278 ------------MEKSKAPMQHDININSNLKQRQGELKGNVQNEQFNAYMNSPSVISSDIDIQSSMAKSADLHLCLKKWE 345 (492)
Q Consensus 278 ------------~~~~~~~v~~v~~~~~~~~~~~~~~~~~~~~~~vp~~~~~~~~~~~~l~~~~~~~~~~dl~~~l~~~~ 345 (492)
....+.+++++ +.+. +..++.+ .++.++++.|.
T Consensus 81 ~~~~~~~~~~~~~~~~~~~v~~~-------------m~~~--~~~v~~~--------------------~~l~~a~~~m~ 125 (180)
T 3sl7_A 81 TWKTFNELQKLISKTYGKVVGDL-------------MTPS--PLVVRDS--------------------TNLEDAARLLL 125 (180)
T ss_dssp CCCSHHHHHHHHHTTTTCBHHHH-------------SEES--CCCEETT--------------------SBHHHHHHHHT
T ss_pred hhhhhHHHHHHHhccccccHHHH-------------hCCC--ceEeCCC--------------------CcHHHHHHHHH
Confidence 00001111111 1111 1112222 23678899999
Q ss_pred HcCcc-eEEecccCCCCCCCcEEEEechhHHHHHHcc
Q 011147 346 RQDVK-ISKEELESLPSVDEEVIGIITLEDVMEELLQ 381 (492)
Q Consensus 346 ~~~~~-~lVv~~~~~pde~g~vvGIITlEDViEeLlg 381 (492)
+.+.+ ++|+ |++|+++||||..||++.+.+
T Consensus 126 ~~~~~~lpVv------d~~g~~vGiit~~dil~~~~~ 156 (180)
T 3sl7_A 126 ETKFRRLPVV------DADGKLIGILTRGNVVRAALQ 156 (180)
T ss_dssp TSTTCEEEEE------CTTCBEEEEEEHHHHHHHHHH
T ss_pred HcCCCEEEEE------CCCCeEEEEEEHHHHHHHHHH
Confidence 99998 9999 789999999999999999975
No 35
>2p9m_A Hypothetical protein MJ0922; structural genomics, collaboratory for structural genomics, secsg; 2.59A {Methanocaldococcus jannaschii dsm 2661ORGANISM_TAXID}
Probab=99.26 E-value=1.1e-11 Score=108.06 Aligned_cols=126 Identities=12% Similarity=0.212 Sum_probs=89.0
Q ss_pred ccccccccccccCcceEEEeCCCChHHHHHHHHHHcCCccceEEeCCCCceEEEEEccchHHHHHHhhccchhhHHhhhc
Q 011147 202 MTQKTAKDAMTAMSKIFSLDINSRLDEKTMGLIISNGHSRVPIYVGTPTNIIGAILGHSHMAVVVKCKNDSKEIAEMEKS 281 (492)
Q Consensus 202 l~~~~V~diMtPr~~v~~l~~~~tl~~e~~~~i~~~~~SRiPV~~~~~d~IvGiv~~~d~m~~vvk~l~~~~~~~~~~~~ 281 (492)
|.+.+|+++|++ ++.+++.++++. ++++.+.+++++++||++++ ++++|+|+.+|+. .+.+.... ..
T Consensus 5 l~~~~v~~im~~--~~~~v~~~~~~~-~a~~~~~~~~~~~~~Vvd~~-~~~~Givt~~dl~---~~~~~~~~------~~ 71 (138)
T 2p9m_A 5 LKNIKVKDVMTK--NVITAKRHEGVV-EAFEKMLKYKISSLPVIDDE-NKVIGIVTTTDIG---YNLIRDKY------TL 71 (138)
T ss_dssp CTTCBGGGTSBC--SCCCEETTSBHH-HHHHHHHHHTCCEEEEECTT-CBEEEEEEHHHHH---HHHTTTCC------CS
T ss_pred cccCCHHHhhcC--CceEECCCCcHH-HHHHHHHHCCCcEEEEECCC-CeEEEEEEHHHHH---HHHHhhcc------cC
Confidence 568899999986 677899999998 99999999999999999753 7899999955530 22221100 01
Q ss_pred cCCCcccccccchhhhhhccccccccccccCCCCCCCCcccchhhhhhhhhhhhhHHHHHHHHhHcC-----cc-eEEec
Q 011147 282 KAPMQHDININSNLKQRQGELKGNVQNEQFNAYMNSPSVISSDIDIQSSMAKSADLHLCLKKWERQD-----VK-ISKEE 355 (492)
Q Consensus 282 ~~~v~~v~~~~~~~~~~~~~~~~~~~~~~vp~~~~~~~~~~~~l~~~~~~~~~~dl~~~l~~~~~~~-----~~-~lVv~ 355 (492)
+.+++++ +.+. +..++.+. ++.++++.|.+.+ .+ ++|+
T Consensus 72 ~~~v~~~-------------m~~~--~~~v~~~~--------------------~l~~~~~~~~~~~~~~~~~~~l~Vv- 115 (138)
T 2p9m_A 72 ETTIGDV-------------MTKD--VITIHEDA--------------------SILEAIKKMDISGKKEEIINQLPVV- 115 (138)
T ss_dssp SCBHHHH-------------SCSS--CCCEETTS--------------------BHHHHHHHHTCC-----CCCEEEEE-
T ss_pred CcCHHHH-------------hCCC--cEEECCCC--------------------CHHHHHHHHHhcCCccccccEEEEE-
Confidence 1222222 1111 11123222 3677899999998 88 9999
Q ss_pred ccCCCCCCCcEEEEechhHHHHHHcc
Q 011147 356 LESLPSVDEEVIGIITLEDVMEELLQ 381 (492)
Q Consensus 356 ~~~~pde~g~vvGIITlEDViEeLlg 381 (492)
|++|+++|+||..|+++.+.+
T Consensus 116 -----d~~g~~~Giit~~dll~~~~~ 136 (138)
T 2p9m_A 116 -----DKNNKLVGIISDGDIIRTISK 136 (138)
T ss_dssp -----CTTSBEEEEEEHHHHHHHHHH
T ss_pred -----CCCCeEEEEEEHHHHHHHHHh
Confidence 778999999999999999875
No 36
>3gby_A Uncharacterized protein CT1051; CBS domain, structural genomics, PSI-2, protein structure initiative; HET: EPE; 1.66A {Chlorobium tepidum tls}
Probab=99.26 E-value=3.2e-11 Score=104.51 Aligned_cols=123 Identities=10% Similarity=0.123 Sum_probs=88.6
Q ss_pred cccccccccccCcceEEEeCCCChHHHHHHHHHHcCCccceEEeCCCCceEEEEEccchHHHHHHhhccchhhHHhhhcc
Q 011147 203 TQKTAKDAMTAMSKIFSLDINSRLDEKTMGLIISNGHSRVPIYVGTPTNIIGAILGHSHMAVVVKCKNDSKEIAEMEKSK 282 (492)
Q Consensus 203 ~~~~V~diMtPr~~v~~l~~~~tl~~e~~~~i~~~~~SRiPV~~~~~d~IvGiv~~~d~m~~vvk~l~~~~~~~~~~~~~ 282 (492)
.+.+|+++|++ ++.+++.++++. ++++.+.+++++.+||+++ ++++|+|+.+| +.+.+.+.. ...
T Consensus 3 ~s~~v~~~m~~--~~~~v~~~~~~~-~a~~~~~~~~~~~~~Vvd~--~~~~Givt~~d----l~~~~~~~~------~~~ 67 (128)
T 3gby_A 3 ASVTFSYLAET--DYPVFTLGGSTA-DAARRLAASGCACAPVLDG--ERYLGMVHLSR----LLEGRKGWP------TVK 67 (128)
T ss_dssp TTCBGGGGCBC--CSCCEETTSBHH-HHHHHHHHHTCSEEEEEET--TEEEEEEEHHH----HHTTCSSSC------CTT
T ss_pred cceEHHHhhcC--CcceECCCCCHH-HHHHHHHHCCCcEEEEEEC--CEEEEEEEHHH----HHHHHhhCC------ccc
Confidence 46789999986 567799999998 9999999999999999986 89999998444 344332210 001
Q ss_pred CCCcccccccchhhhhhccccccccccccCCCCCCCCcccchhhhhhhhhhhhhHHHHHHHHhHcCcc-eEEecccCCCC
Q 011147 283 APMQHDININSNLKQRQGELKGNVQNEQFNAYMNSPSVISSDIDIQSSMAKSADLHLCLKKWERQDVK-ISKEELESLPS 361 (492)
Q Consensus 283 ~~v~~v~~~~~~~~~~~~~~~~~~~~~~vp~~~~~~~~~~~~l~~~~~~~~~~dl~~~l~~~~~~~~~-~lVv~~~~~pd 361 (492)
.+++++ +.+. ...++.+.+ +.++++.|.+++.+ ++|+ |
T Consensus 68 ~~v~~~-------------m~~~--~~~v~~~~~--------------------l~~~~~~~~~~~~~~lpVv------d 106 (128)
T 3gby_A 68 EKLGEE-------------LLET--VRSYRPGEQ--------------------LFDNLISVAAAKCSVVPLA------D 106 (128)
T ss_dssp CBCCGG-------------GCBC--CCCBCTTSB--------------------GGGSHHHHHHCSSSEEEEE------C
T ss_pred CcHHHH-------------ccCC--CcEECCCCC--------------------HHHHHHHHHhCCCcEEEEE------C
Confidence 233333 1111 111233322 44568999999999 9999 7
Q ss_pred CCCcEEEEechhHHHHHHcc
Q 011147 362 VDEEVIGIITLEDVMEELLQ 381 (492)
Q Consensus 362 e~g~vvGIITlEDViEeLlg 381 (492)
++|+++|+||..|+++.+-.
T Consensus 107 ~~g~~~Giit~~dll~~l~~ 126 (128)
T 3gby_A 107 EDGRYEGVVSRKRILGFLAE 126 (128)
T ss_dssp TTCBEEEEEEHHHHHHHHHT
T ss_pred CCCCEEEEEEHHHHHHHHHh
Confidence 89999999999999998853
No 37
>1o50_A CBS domain-containing predicted protein TM0935; CBS-domain PAIR fold, structural genomics, joint center for structural genomics, JCSG; 1.87A {Thermotoga maritima} SCOP: d.37.1.1
Probab=99.24 E-value=3.3e-11 Score=108.22 Aligned_cols=133 Identities=13% Similarity=0.119 Sum_probs=92.2
Q ss_pred ccccccccccccCcceEEEeCCCChHHHHHHHHHHcCCcc-ceEEeCCCCceEEEEEccchHHHHHHh----hccchhhH
Q 011147 202 MTQKTAKDAMTAMSKIFSLDINSRLDEKTMGLIISNGHSR-VPIYVGTPTNIIGAILGHSHMAVVVKC----KNDSKEIA 276 (492)
Q Consensus 202 l~~~~V~diMtPr~~v~~l~~~~tl~~e~~~~i~~~~~SR-iPV~~~~~d~IvGiv~~~d~m~~vvk~----l~~~~~~~ 276 (492)
+...+|+++|++ ++.+++.++++. ++++.+.++++++ +||++++ +++|+|+.+|+++.+... +.......
T Consensus 13 ~~~~~v~~im~~--~~~~v~~~~tl~-ea~~~m~~~~~~~~~~Vvd~~--~~vGivt~~dl~~~~~~~~~~~~~~~~~~~ 87 (157)
T 1o50_A 13 MKVKDVCKLISL--KPTVVEEDTPIE-EIVDRILEDPVTRTVYVARDN--KLVGMIPVMHLLKVSGFHFFGFIPKEELIR 87 (157)
T ss_dssp CBHHHHTTSSCC--CCEEECTTCBHH-HHHHHHHHSTTCCEEEEEETT--EEEEEEEHHHHHHHHHHHHHCCCC------
T ss_pred hccccHhhcccC--CCceECCCCCHH-HHHHHHHhCCCCccEEEEECC--EEEEEEEHHHHHHHHhhhHHhhhccHHHHH
Confidence 677899999986 789999999998 9999999999999 9999864 899999977665443311 00000000
Q ss_pred H--hhhccCCCcccccccchhhhhhccccccccccccCCCCCCCCcccchhhhhhhhhhhhhHHHHHHHHhHcCcc-eEE
Q 011147 277 E--MEKSKAPMQHDININSNLKQRQGELKGNVQNEQFNAYMNSPSVISSDIDIQSSMAKSADLHLCLKKWERQDVK-ISK 353 (492)
Q Consensus 277 ~--~~~~~~~v~~v~~~~~~~~~~~~~~~~~~~~~~vp~~~~~~~~~~~~l~~~~~~~~~~dl~~~l~~~~~~~~~-~lV 353 (492)
. ......++ ..++.. +..++.+. ++.++++.|.+.+.+ ++|
T Consensus 88 ~~~~~~~~~~v--------------~~im~~--~~~v~~~~--------------------~l~~a~~~m~~~~~~~lpV 131 (157)
T 1o50_A 88 SSMKRLIAKNA--------------SEIMLD--PVYVHMDT--------------------PLEEALKLMIDNNIQEMPV 131 (157)
T ss_dssp -CCCCCSSCBH--------------HHHCBC--CCCBCTTS--------------------BHHHHHHHHHHHTCSEEEE
T ss_pred HHHHHHcCCcH--------------HHHcCC--CeEECCCC--------------------CHHHHHHHHHHCCCcEEEE
Confidence 0 00001111 112211 11123222 367889999999998 999
Q ss_pred ecccCCCCCCCcEEEEechhHHHHHHcc
Q 011147 354 EELESLPSVDEEVIGIITLEDVMEELLQ 381 (492)
Q Consensus 354 v~~~~~pde~g~vvGIITlEDViEeLlg 381 (492)
+ |++|+++|+||..|+++.+.+
T Consensus 132 v------d~~g~~vGiit~~dll~~l~~ 153 (157)
T 1o50_A 132 V------DEKGEIVGDLNSLEILLALWK 153 (157)
T ss_dssp E------CTTSCEEEEEEHHHHHHHHHH
T ss_pred E------cCCCEEEEEEEHHHHHHHHHH
Confidence 9 778999999999999999976
No 38
>1pbj_A Hypothetical protein; structural genomics, domain, PSI, protein structure initiative; 1.40A {Methanothermobacter thermautotrophicusdelta H} SCOP: d.37.1.1
Probab=99.24 E-value=3e-11 Score=103.38 Aligned_cols=121 Identities=12% Similarity=0.222 Sum_probs=86.9
Q ss_pred cccccccccCcceEEEeCCCChHHHHHHHHHHcCCccceEEeCCCCceEEEEEccchHHHHHHhhccchhhHHhhhccCC
Q 011147 205 KTAKDAMTAMSKIFSLDINSRLDEKTMGLIISNGHSRVPIYVGTPTNIIGAILGHSHMAVVVKCKNDSKEIAEMEKSKAP 284 (492)
Q Consensus 205 ~~V~diMtPr~~v~~l~~~~tl~~e~~~~i~~~~~SRiPV~~~~~d~IvGiv~~~d~m~~vvk~l~~~~~~~~~~~~~~~ 284 (492)
.+|+|+|++ ++.+++.++++. ++++.+.+++++++||++ .++++|+|+.+|+++.+.+... ..+.+
T Consensus 1 m~v~~~m~~--~~~~v~~~~~~~-~a~~~~~~~~~~~~~Vvd--~~~~~G~it~~dl~~~~~~~~~---------~~~~~ 66 (125)
T 1pbj_A 1 MRVEDVMVT--DVDTIDITASLE-DVLRNYVENAKGSSVVVK--EGVRVGIVTTWDVLEAIAEGDD---------LAEVK 66 (125)
T ss_dssp -CHHHHCBC--SCCEEETTCBHH-HHHHHHHHHCCCEEEEEE--TTEEEEEEEHHHHHHHHHHTCC---------TTTSB
T ss_pred CCHHHhcCC--CceEECCCCcHH-HHHHHHHHcCCCEEEEEe--CCeeEEEEeHHHHHHHHhcCCc---------ccccC
Confidence 368999986 778899999998 999999999999999998 3789999997665443332211 01122
Q ss_pred CcccccccchhhhhhccccccccccccCCCCCCCCcccchhhhhhhhhhhhhHHHHHHHHhHcCcc-eEEecccCCCCCC
Q 011147 285 MQHDININSNLKQRQGELKGNVQNEQFNAYMNSPSVISSDIDIQSSMAKSADLHLCLKKWERQDVK-ISKEELESLPSVD 363 (492)
Q Consensus 285 v~~v~~~~~~~~~~~~~~~~~~~~~~vp~~~~~~~~~~~~l~~~~~~~~~~dl~~~l~~~~~~~~~-~lVv~~~~~pde~ 363 (492)
+.++ +.+. ...++.+. ++.++++.|.+.+.+ ++|+ |+
T Consensus 67 v~~~-------------m~~~--~~~v~~~~--------------------~l~~~~~~~~~~~~~~l~Vv------d~- 104 (125)
T 1pbj_A 67 VWEV-------------MERD--LVTISPRA--------------------TIKEAAEKMVKNVVWRLLVE------ED- 104 (125)
T ss_dssp HHHH-------------CBCG--GGEECTTS--------------------CHHHHHHHHHHHTCSEEEEE------ET-
T ss_pred HHHH-------------cCCC--CeEECCCC--------------------CHHHHHHHHHhcCCcEEEEE------EC-
Confidence 3222 1111 11123332 366789999999988 9998 56
Q ss_pred CcEEEEechhHHHHHHcc
Q 011147 364 EEVIGIITLEDVMEELLQ 381 (492)
Q Consensus 364 g~vvGIITlEDViEeLlg 381 (492)
|+++|+||..|+++.+.+
T Consensus 105 ~~~~Gvit~~dl~~~l~~ 122 (125)
T 1pbj_A 105 DEIIGVISATDILRAKMA 122 (125)
T ss_dssp TEEEEEEEHHHHHHHHC-
T ss_pred CEEEEEEEHHHHHHHHHh
Confidence 999999999999999986
No 39
>2j9l_A Chloride channel protein 5; ION channel, ION transport, voltage-gated; HET: ATP; 2.30A {Homo sapiens} SCOP: d.37.1.1 PDB: 2ja3_A*
Probab=99.23 E-value=2.2e-11 Score=111.60 Aligned_cols=150 Identities=11% Similarity=0.182 Sum_probs=91.9
Q ss_pred ccccccccccccCcc--eEEE--eCCCChHHHHHHHHHHcCCccceEEe-CCCCceEEEEEccchHHHHHHhhccchhhH
Q 011147 202 MTQKTAKDAMTAMSK--IFSL--DINSRLDEKTMGLIISNGHSRVPIYV-GTPTNIIGAILGHSHMAVVVKCKNDSKEIA 276 (492)
Q Consensus 202 l~~~~V~diMtPr~~--v~~l--~~~~tl~~e~~~~i~~~~~SRiPV~~-~~~d~IvGiv~~~d~m~~vvk~l~~~~~~~ 276 (492)
+.+.+|+|+|+|..+ ++++ +.++++. ++++.+.+++++++||++ ++.++++|+|+.+|+++.+...........
T Consensus 8 ~~~~~v~dim~~~~~~~~~~v~~~~~~~~~-~a~~~~~~~~~~~~pVv~~d~~~~lvGiit~~dl~~~~~~~~~~~~~~~ 86 (185)
T 2j9l_A 8 AHKTLAMDVMKPRRNDPLLTVLTQDSMTVE-DVETIISETTYSGFPVVVSRESQRLVGFVLRRDLIISIENARKKQDGVV 86 (185)
T ss_dssp -CCCBHHHHSBSCTTSCCCCCEESSCEEHH-HHHHHHHHCCCSEEEEESCTTTCBEEEEEEHHHHHHHHHHHHTSCSCCC
T ss_pred hccCcHHHHhcccccCceEEEecCCCccHH-HHHHHHHhcCCCceeEEEECCCCeEEEEEEHHHHHHHHHhhcccCCCcc
Confidence 467899999998754 6777 9999998 999999999999999994 345789999997766554433210000000
Q ss_pred Hhhh--ccCCCcccccccchhhhhhccccccccccccCCCCCCCCcccchhhhhhhhhhhhhHHHHHHHHhHcCcc-eEE
Q 011147 277 EMEK--SKAPMQHDININSNLKQRQGELKGNVQNEQFNAYMNSPSVISSDIDIQSSMAKSADLHLCLKKWERQDVK-ISK 353 (492)
Q Consensus 277 ~~~~--~~~~v~~v~~~~~~~~~~~~~~~~~~~~~~vp~~~~~~~~~~~~l~~~~~~~~~~dl~~~l~~~~~~~~~-~lV 353 (492)
.... ......+. ............++.. .+..++.+ .++.++++.|.+.+.+ ++|
T Consensus 87 ~~~~~~~~~~~~~~-~~~~~~~~~v~~im~~-~~~~v~~~--------------------~~l~~a~~~m~~~~~~~l~V 144 (185)
T 2j9l_A 87 STSIIYFTEHSPPL-PPYTPPTLKLRNILDL-SPFTVTDL--------------------TPMEIVVDIFRKLGLRQCLV 144 (185)
T ss_dssp TTCEEECSSSCCCC-CTTCCCCEECGGGEES-SCCEEETT--------------------SBHHHHHHHHHHHTCSEEEE
T ss_pred ccceeecccCCccc-ccccccCccHHHhhCc-CCeEeCCC--------------------CCHHHHHHHHHhCCCcEEEE
Confidence 0000 00000000 0000000011111100 11112222 2367889999999998 988
Q ss_pred ecccCCCCCCCcEEEEechhHHHHHHcc
Q 011147 354 EELESLPSVDEEVIGIITLEDVMEELLQ 381 (492)
Q Consensus 354 v~~~~~pde~g~vvGIITlEDViEeLlg 381 (492)
+ | +|+++||||..||++.+.+
T Consensus 145 v------d-~g~~vGiit~~dll~~l~~ 165 (185)
T 2j9l_A 145 T------H-NGRLLGIITKKDVLKHIAQ 165 (185)
T ss_dssp E------E-TTEEEEEEEHHHHHHHHHH
T ss_pred E------E-CCEEEEEEEHHHHHHHHHH
Confidence 8 5 8999999999999999976
No 40
>2nyc_A Nuclear protein SNF4; bateman2 domain, AMP kinase, protein binding; 1.90A {Saccharomyces cerevisiae} SCOP: d.37.1.1 PDB: 2nye_A
Probab=99.22 E-value=3e-11 Score=105.78 Aligned_cols=130 Identities=12% Similarity=0.116 Sum_probs=91.0
Q ss_pred ccccccccc---ccccCcceEEEeCCCChHHHHHHHHHHcCCccceEEeCCCCceEEEEEccchHHHHHHhhccchhhHH
Q 011147 201 DMTQKTAKD---AMTAMSKIFSLDINSRLDEKTMGLIISNGHSRVPIYVGTPTNIIGAILGHSHMAVVVKCKNDSKEIAE 277 (492)
Q Consensus 201 ~l~~~~V~d---iMtPr~~v~~l~~~~tl~~e~~~~i~~~~~SRiPV~~~~~d~IvGiv~~~d~m~~vvk~l~~~~~~~~ 277 (492)
++-++++++ +|+ .++++++.++++. ++++.+.+++++++||++++ ++++|+|+.+|+++.+.+... .
T Consensus 4 ~~~~~~v~~~~~~~~--~~~~~v~~~~~~~-~a~~~~~~~~~~~~~Vvd~~-~~~~Givt~~dl~~~~~~~~~----~-- 73 (144)
T 2nyc_A 4 HFLKIPIGDLNIITQ--DNMKSCQMTTPVI-DVIQMLTQGRVSSVPIIDEN-GYLINVYEAYDVLGLIKGGIY----N-- 73 (144)
T ss_dssp GGGGSBGGGSSCCBC--SSCCCBCTTSBHH-HHHHHHHHHTCSEEEEECTT-CBEEEEEEHHHHHHHHHTC---------
T ss_pred chhhcchhhcCCCCC--CCceEECCCCcHH-HHHHHHHHcCcceeeEEcCC-CcEEEEEcHHHHHHHhccccc----c--
Confidence 355678888 776 4788899999998 99999999999999999753 789999997665443322110 0
Q ss_pred hhhccCCCcccccccchhhhhhccccccc----cccccCCCCCCCCcccchhhhhhhhhhhhhHHHHHHHHhHcCcc-eE
Q 011147 278 MEKSKAPMQHDININSNLKQRQGELKGNV----QNEQFNAYMNSPSVISSDIDIQSSMAKSADLHLCLKKWERQDVK-IS 352 (492)
Q Consensus 278 ~~~~~~~v~~v~~~~~~~~~~~~~~~~~~----~~~~vp~~~~~~~~~~~~l~~~~~~~~~~dl~~~l~~~~~~~~~-~l 352 (492)
..+.++.++ +.+.. ....++.+. ++.++++.|.+.+.+ ++
T Consensus 74 --~~~~~v~~~-------------m~~~~~~~~~~~~v~~~~--------------------~l~~~~~~m~~~~~~~l~ 118 (144)
T 2nyc_A 74 --DLSLSVGEA-------------LMRRSDDFEGVYTCTKND--------------------KLSTIMDNIRKARVHRFF 118 (144)
T ss_dssp ---CCSBHHHH-------------HHHCC------CEECTTS--------------------BHHHHHHHHHHHTCSEEE
T ss_pred --cCCccHHHH-------------HhcCccccCCCeEECCCC--------------------cHHHHHHHHHHCCCCEEE
Confidence 011222222 11100 111123322 367789999999998 99
Q ss_pred EecccCCCCCCCcEEEEechhHHHHHHcc
Q 011147 353 KEELESLPSVDEEVIGIITLEDVMEELLQ 381 (492)
Q Consensus 353 Vv~~~~~pde~g~vvGIITlEDViEeLlg 381 (492)
|+ |++|+++|+||..|+++.+.+
T Consensus 119 Vv------d~~g~~~Giit~~dil~~l~~ 141 (144)
T 2nyc_A 119 VV------DDVGRLVGVLTLSDILKYILL 141 (144)
T ss_dssp EE------CTTSBEEEEEEHHHHHHHHHH
T ss_pred EE------CCCCCEEEEEEHHHHHHHHHh
Confidence 99 788999999999999999975
No 41
>2pfi_A Chloride channel protein CLC-Ka; cystathionine beta synthetase (CBS) domains containing protein, transport protein; 1.60A {Homo sapiens}
Probab=99.21 E-value=3e-11 Score=108.31 Aligned_cols=139 Identities=10% Similarity=0.169 Sum_probs=91.2
Q ss_pred HHhhcccccccccccccccCcceEEEeCCCChHHHHHHHHHHcCCccceEEeC-CCCceEEEEEccchHHHHHHhhccch
Q 011147 195 IITGALDMTQKTAKDAMTAMSKIFSLDINSRLDEKTMGLIISNGHSRVPIYVG-TPTNIIGAILGHSHMAVVVKCKNDSK 273 (492)
Q Consensus 195 iI~~vl~l~~~~V~diMtPr~~v~~l~~~~tl~~e~~~~i~~~~~SRiPV~~~-~~d~IvGiv~~~d~m~~vvk~l~~~~ 273 (492)
+..+.+.+.+.+|+|+|++ ++++++.++++. ++++.+.+++++++||+++ +.++++|+|+.+|+++.+.+.....
T Consensus 3 l~~~~~~~~~~~v~dim~~--~~~~v~~~~~~~-~a~~~~~~~~~~~~pVvd~~~~~~~~Givt~~dl~~~~~~~~~~~- 78 (164)
T 2pfi_A 3 ILGRNIGSHHVRVEHFMNH--SITTLAKDTPLE-EVVKVVTSTDVTEYPLVESTESQILVGIVQRAQLVQALQAEPPSR- 78 (164)
T ss_dssp -------CCSCBHHHHCBC--CCCCEETTCBHH-HHHHHHHTCCCSEEEEESCTTTCBEEEEEEHHHHHHHHHC------
T ss_pred CccccccccCCCHHHHcCC--CCeEECCCCcHH-HHHHHHHhCCCCceeEEecCCCCEEEEEEEHHHHHHHHHhhcccc-
Confidence 3445667889999999997 678899999998 9999999999999999975 3578999999666544332211100
Q ss_pred hhHHhhhccCCCcccccccchhhhhhccccccc--c--ccccCCCCCCCCcccchhhhhhhhhhhhhHHHHHHHHhHcCc
Q 011147 274 EIAEMEKSKAPMQHDININSNLKQRQGELKGNV--Q--NEQFNAYMNSPSVISSDIDIQSSMAKSADLHLCLKKWERQDV 349 (492)
Q Consensus 274 ~~~~~~~~~~~v~~v~~~~~~~~~~~~~~~~~~--~--~~~vp~~~~~~~~~~~~l~~~~~~~~~~dl~~~l~~~~~~~~ 349 (492)
.. ....++.++ +.+.. . +..++.+ .++.++++.|.+.+.
T Consensus 79 -~~---~~~~~v~~~-------------m~~~~~~~~~~~~v~~~--------------------~~l~~~~~~m~~~~~ 121 (164)
T 2pfi_A 79 -AP---GHQQCLQDI-------------LARGCPTEPVTLTLFSE--------------------TTLHQAQNLFKLLNL 121 (164)
T ss_dssp ------CCCCBHHHH-------------HHTTCCCBCCCCCEETT--------------------CBHHHHHHHHHHTTC
T ss_pred -CC---cccchhhhh-------------hcccccccCCceEECCC--------------------CcHHHHHHHHHHhCC
Confidence 00 001122222 11000 0 1111222 236788999999999
Q ss_pred c-eEEecccCCCCCCCcEEEEechhHHHHHHcc
Q 011147 350 K-ISKEELESLPSVDEEVIGIITLEDVMEELLQ 381 (492)
Q Consensus 350 ~-~lVv~~~~~pde~g~vvGIITlEDViEeLlg 381 (492)
+ ++|+ | +|+++||||..|+++.+.+
T Consensus 122 ~~lpVv------d-~g~l~Giit~~dil~~~~~ 147 (164)
T 2pfi_A 122 QSLFVT------S-RGRAVGCVSWVEMKKAISN 147 (164)
T ss_dssp SEEEEE------E-TTEEEEEEEHHHHHHHHHH
T ss_pred CEEEEE------E-CCEEEEEEEHHHHHHHHHh
Confidence 8 9999 5 7999999999999999875
No 42
>1pvm_A Conserved hypothetical protein TA0289; structural genomics, CBS domain, PSI, protein structure initiative; 1.50A {Thermoplasma acidophilum dsm 1728} SCOP: d.37.1.1 g.41.13.1 PDB: 2qh1_A
Probab=99.20 E-value=4e-11 Score=110.75 Aligned_cols=124 Identities=13% Similarity=0.143 Sum_probs=89.0
Q ss_pred cccccccccCcceEEEeCCCChHHHHHHHHHHcCCccceEEeCCCCceEEEEEccchHHHHHHhhccchhhHHhhhccCC
Q 011147 205 KTAKDAMTAMSKIFSLDINSRLDEKTMGLIISNGHSRVPIYVGTPTNIIGAILGHSHMAVVVKCKNDSKEIAEMEKSKAP 284 (492)
Q Consensus 205 ~~V~diMtPr~~v~~l~~~~tl~~e~~~~i~~~~~SRiPV~~~~~d~IvGiv~~~d~m~~vvk~l~~~~~~~~~~~~~~~ 284 (492)
.+|+|+|++ ++++++.++++. ++++.+.+++++++||++++ ++++|+|+.+|++ +.+...... ..+.+
T Consensus 9 ~~v~~im~~--~~~~v~~~~~l~-ea~~~~~~~~~~~~pVvd~~-g~~vGivt~~dl~----~~~~~~~~~----~~~~~ 76 (184)
T 1pvm_A 9 MRVEKIMNS--NFKTVNWNTTVF-DAVKIMNENHLYGLVVKDDN-GNDVGLLSERSII----KRFIPRNKK----PDEVP 76 (184)
T ss_dssp CBGGGTSBT--TCCEEETTCBHH-HHHHHHHHHTCCEEEEECTT-SCEEEEEEHHHHH----HHTGGGCCC----GGGSB
T ss_pred cCHHHhcCC--CCeEECCCCcHH-HHHHHHHHcCCCEEEEEcCC-CcEEEEEeHHHHH----HHHhhcccC----cccCC
Confidence 689999985 788899999998 99999999999999999753 7899999965543 332210000 01223
Q ss_pred CcccccccchhhhhhccccccccccccCCCCCCCCcccchhhhhhhhhhhhhHHHHHHHHhHcCcc-eEEecccCCCCCC
Q 011147 285 MQHDININSNLKQRQGELKGNVQNEQFNAYMNSPSVISSDIDIQSSMAKSADLHLCLKKWERQDVK-ISKEELESLPSVD 363 (492)
Q Consensus 285 v~~v~~~~~~~~~~~~~~~~~~~~~~vp~~~~~~~~~~~~l~~~~~~~~~~dl~~~l~~~~~~~~~-~lVv~~~~~pde~ 363 (492)
++++ +.+. ...++.+. ++.++++.|.+.+.+ ++|+ |++
T Consensus 77 v~~i-------------m~~~--~~~v~~~~--------------------~l~~a~~~m~~~~~~~lpVv------d~~ 115 (184)
T 1pvm_A 77 IRLV-------------MRKP--IPKVKSDY--------------------DVKDVAAYLSENGLERCAVV------DDP 115 (184)
T ss_dssp GGGT-------------SBSS--CCEEETTC--------------------BHHHHHHHHHHHTCSEEEEE------CTT
T ss_pred HHHH-------------hCCC--CcEECCCC--------------------CHHHHHHHHHHcCCcEEEEE------cCC
Confidence 3333 1111 11123332 367789999999998 9999 788
Q ss_pred CcEEEEechhHHHHHHcc
Q 011147 364 EEVIGIITLEDVMEELLQ 381 (492)
Q Consensus 364 g~vvGIITlEDViEeLlg 381 (492)
|+++|+||.+|+++.+.+
T Consensus 116 g~~~Givt~~dll~~~~~ 133 (184)
T 1pvm_A 116 GRVVGIVTLTDLSRYLSR 133 (184)
T ss_dssp CCEEEEEEHHHHTTTSCH
T ss_pred CeEEEEEEHHHHHHHHHh
Confidence 999999999999988765
No 43
>3kh5_A Protein MJ1225; AMPK, AMP, ADP, ATP, CBS domain, archaea, unknown function; HET: ADP AMP; 2.10A {Methanocaldococcus jannaschii} PDB: 3lfz_A*
Probab=99.19 E-value=3.4e-11 Score=116.95 Aligned_cols=154 Identities=12% Similarity=0.186 Sum_probs=104.0
Q ss_pred ccCHHHHHHHHHhhccccCCCCCCChhHHHHHhhcccccccccccccccCcceEEEeCCCChHHHHHHHHHHcCCccceE
Q 011147 165 LLRRAELKTLVDMHGNEAGKGGELTHDETTIITGALDMTQKTAKDAMTAMSKIFSLDINSRLDEKTMGLIISNGHSRVPI 244 (492)
Q Consensus 165 ~~s~eEL~~lv~~~~~e~~~~g~L~~~E~~iI~~vl~l~~~~V~diMtPr~~v~~l~~~~tl~~e~~~~i~~~~~SRiPV 244 (492)
.+|.+||..++.. +...+.+. .....+++...+.+|+++|++ ++++++.++++. ++++.+.+++++++||
T Consensus 51 ivt~~di~~~~~~----~~~~~~~~---~~~~~~~~~~~~~~v~~im~~--~~~~v~~~~~~~-~a~~~~~~~~~~~~~V 120 (280)
T 3kh5_A 51 IITSMDIVDFMGG----GSKYNLIR---EKHERNFLAAINEPVREIMEE--NVITLKENADID-EAIETFLTKNVGGAPI 120 (280)
T ss_dssp EEEHHHHHHHTTT----SGGGHHHH---TTSTTCHHHHTTSBGGGTSBC--SCCCEETTCBHH-HHHHHHHHTTCSEEEE
T ss_pred EEEHHHHHHHhcc----cchhhhhh---hccccchhHHhhhhHHHhcCC--CCEEECCCCCHH-HHHHHHHhCCCCEEEE
Confidence 5788888887642 11111111 111333444457899999997 778899999998 9999999999999999
Q ss_pred EeCCCCceEEEEEccchHHHHHHhhccchhhHHhhhccCCCcccccccchhhhhhccccccccccccCCCCCCCCcccch
Q 011147 245 YVGTPTNIIGAILGHSHMAVVVKCKNDSKEIAEMEKSKAPMQHDININSNLKQRQGELKGNVQNEQFNAYMNSPSVISSD 324 (492)
Q Consensus 245 ~~~~~d~IvGiv~~~d~m~~vvk~l~~~~~~~~~~~~~~~v~~v~~~~~~~~~~~~~~~~~~~~~~vp~~~~~~~~~~~~ 324 (492)
+++ .++++|+++.+|+++.+.+... ...+++++ +.+. ...++.+.
T Consensus 121 vd~-~~~~~Givt~~dl~~~~~~~~~----------~~~~v~~~-------------m~~~--~~~v~~~~--------- 165 (280)
T 3kh5_A 121 VND-ENQLISLITERDVIRALLDKID----------ENEVIDDY-------------ITRD--VIVATPGE--------- 165 (280)
T ss_dssp ECT-TCBEEEEEEHHHHHHHHGGGSC----------TTCBSGGG-------------CBCS--CCCBCTTC---------
T ss_pred EcC-CCEEEEEEEHHHHHHHHhhcCC----------CCCCHHHH-------------hCCC--CeEECCCC---------
Confidence 975 4789999996665433322211 11233333 1111 11123332
Q ss_pred hhhhhhhhhhhhHHHHHHHHhHcCcc-eEEecccCCCCCCCcEEEEechhHHHHHHcc
Q 011147 325 IDIQSSMAKSADLHLCLKKWERQDVK-ISKEELESLPSVDEEVIGIITLEDVMEELLQ 381 (492)
Q Consensus 325 l~~~~~~~~~~dl~~~l~~~~~~~~~-~lVv~~~~~pde~g~vvGIITlEDViEeLlg 381 (492)
++.++++.|++.+.+ ++|+ ++|+++|+||.+|+++.+..
T Consensus 166 -----------~l~~~~~~~~~~~~~~~~Vv-------~~~~~~Givt~~dl~~~~~~ 205 (280)
T 3kh5_A 166 -----------RLKDVARTMVRNGFRRLPVV-------SEGRLVGIITSTDFIKLLGS 205 (280)
T ss_dssp -----------BHHHHHHHHHHHTCSEEEEE-------ETTEEEEEEEHHHHHHHHTS
T ss_pred -----------cHHHHHHHHHHcCCCEEEEE-------ECCEEEEEEEHHHHHHHHhh
Confidence 366789999999999 8888 57999999999999999864
No 44
>1y5h_A Hypothetical protein RV2626C; CBS domain, unknown function; 1.50A {Mycobacterium tuberculosis} SCOP: d.37.1.1 PDB: 1xkf_A
Probab=99.16 E-value=2.2e-11 Score=105.68 Aligned_cols=126 Identities=17% Similarity=0.199 Sum_probs=85.6
Q ss_pred ccccccccccccCcceEEEeCCCChHHHHHHHHHHcCCccceEEeCCCCceEEEEEccchHHHHHHhhccchhhHHhhhc
Q 011147 202 MTQKTAKDAMTAMSKIFSLDINSRLDEKTMGLIISNGHSRVPIYVGTPTNIIGAILGHSHMAVVVKCKNDSKEIAEMEKS 281 (492)
Q Consensus 202 l~~~~V~diMtPr~~v~~l~~~~tl~~e~~~~i~~~~~SRiPV~~~~~d~IvGiv~~~d~m~~vvk~l~~~~~~~~~~~~ 281 (492)
++-.+|+|+|++ ++.+++.++++. ++++.+.+++++++||++++ ++++|+|+.+|++. +.+... .. ..
T Consensus 5 ~~~~~v~~im~~--~~~~v~~~~~~~-~a~~~~~~~~~~~~~Vvd~~-~~~~Givt~~dl~~---~~~~~~-~~----~~ 72 (133)
T 1y5h_A 5 FTMTTARDIMNA--GVTCVGEHETLT-AAAQYMREHDIGALPICGDD-DRLHGMLTDRDIVI---KGLAAG-LD----PN 72 (133)
T ss_dssp ---CCHHHHSEE--TCCCEETTSBHH-HHHHHHHHHTCSEEEEECGG-GBEEEEEEHHHHHH---TTGGGT-CC----TT
T ss_pred hhhcCHHHHhcC--CceEeCCCCCHH-HHHHHHHHhCCCeEEEECCC-CeEEEEEeHHHHHH---HHHhcC-CC----cc
Confidence 445789999986 678899999998 99999999999999999643 78999998554321 122110 00 00
Q ss_pred cCCCcccccccchhhhhhccccccccccccCCCCCCCCcccchhhhhhhhhhhhhHHHHHHHHhHcCcc-eEEecccCCC
Q 011147 282 KAPMQHDININSNLKQRQGELKGNVQNEQFNAYMNSPSVISSDIDIQSSMAKSADLHLCLKKWERQDVK-ISKEELESLP 360 (492)
Q Consensus 282 ~~~v~~v~~~~~~~~~~~~~~~~~~~~~~vp~~~~~~~~~~~~l~~~~~~~~~~dl~~~l~~~~~~~~~-~lVv~~~~~p 360 (492)
+.+++++ +.+. +..++.+. ++.++++.|.+.+.+ ++|+
T Consensus 73 ~~~v~~~-------------m~~~--~~~v~~~~--------------------~l~~~~~~m~~~~~~~l~Vv------ 111 (133)
T 1y5h_A 73 TATAGEL-------------ARDS--IYYVDANA--------------------SIQEMLNVMEEHQVRRVPVI------ 111 (133)
T ss_dssp TSBHHHH-------------HTTC--CCCEETTC--------------------CHHHHHHHHHHHTCSEEEEE------
T ss_pred ccCHHHH-------------hcCC--CEEECCCC--------------------CHHHHHHHHHHcCCCEEEEE------
Confidence 1222222 1111 11122222 367789999999998 9999
Q ss_pred CCCCcEEEEechhHHHHHHcc
Q 011147 361 SVDEEVIGIITLEDVMEELLQ 381 (492)
Q Consensus 361 de~g~vvGIITlEDViEeLlg 381 (492)
|+ |+++|+||..|+++.+.+
T Consensus 112 d~-g~~~Giit~~dil~~l~~ 131 (133)
T 1y5h_A 112 SE-HRLVGIVTEADIARHLPE 131 (133)
T ss_dssp ET-TEEEEEEEHHHHHHTCC-
T ss_pred EC-CEEEEEEEHHHHHHHHHh
Confidence 55 899999999999999876
No 45
>2o16_A Acetoin utilization protein ACUB, putative; structural genomics, unknown function, PSI-2, protein struct initiative; 1.90A {Vibrio cholerae} SCOP: d.37.1.1
Probab=99.15 E-value=1.2e-10 Score=105.13 Aligned_cols=132 Identities=14% Similarity=0.159 Sum_probs=90.0
Q ss_pred cccccccccccCcceEEEeCCCChHHHHHHHHHHcCCccceEEeCCCCceEEEEEccchHHHHHHhhccchhhHHhhhcc
Q 011147 203 TQKTAKDAMTAMSKIFSLDINSRLDEKTMGLIISNGHSRVPIYVGTPTNIIGAILGHSHMAVVVKCKNDSKEIAEMEKSK 282 (492)
Q Consensus 203 ~~~~V~diMtPr~~v~~l~~~~tl~~e~~~~i~~~~~SRiPV~~~~~d~IvGiv~~~d~m~~vvk~l~~~~~~~~~~~~~ 282 (492)
...+|+|+|++ ++++++.++++. ++++.+.+++++++||+++ .++++|+|..+|+++.+........ .......+
T Consensus 3 ~~~~v~dim~~--~~~~v~~~~tl~-~a~~~m~~~~~~~~pVvd~-~~~lvGivt~~dl~~~~~~~~~~~~-~~~~~~~~ 77 (160)
T 2o16_A 3 LMIKVEDMMTR--HPHTLLRTHTLN-DAKHLMEALDIRHVPIVDA-NKKLLGIVSQRDLLAAQESSLQRSA-QGDSLAFE 77 (160)
T ss_dssp CCCBGGGTSEE--SCCCBCTTSBHH-HHHHHHHHHTCSEEEEECT-TCBEEEEEEHHHHHHHHHHHCC----------CC
T ss_pred CcCcHHHHhcC--CCeEECCCCcHH-HHHHHHHHcCCCEEEEEcC-CCcEEEEEeHHHHHHHHHHhhcccc-cccchhcc
Confidence 45789999986 678899999998 9999999999999999975 3789999997776555443221000 00000011
Q ss_pred CCCcccccccchhhhhhccccccccccccCCCCCCCCcccchhhhhhhhhhhhhHHHHHHHHhHcCcc-eEEecccCCCC
Q 011147 283 APMQHDININSNLKQRQGELKGNVQNEQFNAYMNSPSVISSDIDIQSSMAKSADLHLCLKKWERQDVK-ISKEELESLPS 361 (492)
Q Consensus 283 ~~v~~v~~~~~~~~~~~~~~~~~~~~~~vp~~~~~~~~~~~~l~~~~~~~~~~dl~~~l~~~~~~~~~-~lVv~~~~~pd 361 (492)
.+++++ +.+. +..++.+. ++.++++.|.+.+.+ ++|+ |
T Consensus 78 ~~v~~i-------------m~~~--~~~v~~~~--------------------~l~~a~~~m~~~~~~~lpVv------d 116 (160)
T 2o16_A 78 TPLFEV-------------MHTD--VTSVAPQA--------------------GLKESAIYMQKHKIGCLPVV------A 116 (160)
T ss_dssp CBHHHH-------------SCSC--EEEBCTTS--------------------BHHHHHHHHHHTTCSCEEEE------E
T ss_pred cCHHHH-------------hcCC--CeEECCCC--------------------CHHHHHHHHHHhCCCEEEEE------E
Confidence 222222 1111 11123332 367789999999988 9999 5
Q ss_pred CCCcEEEEechhHHHHHHcc
Q 011147 362 VDEEVIGIITLEDVMEELLQ 381 (492)
Q Consensus 362 e~g~vvGIITlEDViEeLlg 381 (492)
+ |+++||||..||++.+.+
T Consensus 117 ~-g~lvGiit~~dil~~~~~ 135 (160)
T 2o16_A 117 K-DVLVGIITDSDFVTIAIN 135 (160)
T ss_dssp T-TEEEEEECHHHHHHHHHH
T ss_pred C-CEEEEEEEHHHHHHHHHH
Confidence 5 999999999999998754
No 46
>2uv4_A 5'-AMP-activated protein kinase subunit gamma-1; transferase, CBS domain, lipid synthesis, fatty acid biosynthesis; HET: AMP; 1.33A {Homo sapiens} PDB: 2uv5_A* 2uv6_A* 2uv7_A*
Probab=99.15 E-value=1.5e-10 Score=103.29 Aligned_cols=131 Identities=9% Similarity=0.170 Sum_probs=88.7
Q ss_pred ccccccccccccCcceEEEeCCCChHHHHHHHHHHcCCccceEEeCCCCceEEEEEccchHHHHHHhhccchhhHHhhhc
Q 011147 202 MTQKTAKDAMTAMSKIFSLDINSRLDEKTMGLIISNGHSRVPIYVGTPTNIIGAILGHSHMAVVVKCKNDSKEIAEMEKS 281 (492)
Q Consensus 202 l~~~~V~diMtPr~~v~~l~~~~tl~~e~~~~i~~~~~SRiPV~~~~~d~IvGiv~~~d~m~~vvk~l~~~~~~~~~~~~ 281 (492)
+++.+|+++ .++.+++.++++. ++++.+.+++++.+||++++ ++++|+|+.+|+++.+.+.... ..
T Consensus 20 l~~~~v~~~----~~~~~v~~~~~~~-~a~~~m~~~~~~~~pVvd~~-~~~vGivt~~dl~~~~~~~~~~--------~~ 85 (152)
T 2uv4_A 20 LEELQIGTY----ANIAMVRTTTPVY-VALGIFVQHRVSALPVVDEK-GRVVDIYSKFDVINLAAEKTYN--------NL 85 (152)
T ss_dssp HHHHTCSBC----SSCCCEETTCBHH-HHHHHHHHHCCSEEEEECTT-SBEEEEEEHHHHHHHHHCSSCC--------CT
T ss_pred HHHccCCcc----CCceEeCCCCcHH-HHHHHHHHcCCceEeEECCC-CcEEEEEeHHHHHHHhcchhhh--------hh
Confidence 466788887 4778899999998 99999999999999999753 7899999966654333211000 01
Q ss_pred cCCCcccccccchhhhhhccccccccccccCCCCCCCCcccchhhhhhhhhhhhhHHHHHHHHhHcCcc-eEEecccCCC
Q 011147 282 KAPMQHDININSNLKQRQGELKGNVQNEQFNAYMNSPSVISSDIDIQSSMAKSADLHLCLKKWERQDVK-ISKEELESLP 360 (492)
Q Consensus 282 ~~~v~~v~~~~~~~~~~~~~~~~~~~~~~vp~~~~~~~~~~~~l~~~~~~~~~~dl~~~l~~~~~~~~~-~lVv~~~~~p 360 (492)
+.++.+++... ..+.+. +..++.+. ++.++++.|.+.+.+ ++|+
T Consensus 86 ~~~v~~~m~~~-------~~~~~~--~~~v~~~~--------------------~l~~a~~~m~~~~~~~lpVv------ 130 (152)
T 2uv4_A 86 DVSVTKALQHR-------SHYFEG--VLKCYLHE--------------------TLETIINRLVEAEVHRLVVV------ 130 (152)
T ss_dssp TSBGGGGGGTC-------CHHHHT--CSEECTTS--------------------BHHHHHHHHHHHTCSEEEEE------
T ss_pred cchHHHHHhhh-------hcccCC--CeEECCCC--------------------cHHHHHHHHHHcCCeEEEEE------
Confidence 22333331000 000011 11123322 366789999999998 9999
Q ss_pred CCCCcEEEEechhHHHHHHcc
Q 011147 361 SVDEEVIGIITLEDVMEELLQ 381 (492)
Q Consensus 361 de~g~vvGIITlEDViEeLlg 381 (492)
|++|+++||||..|+++.+..
T Consensus 131 d~~g~~vGiit~~dil~~l~~ 151 (152)
T 2uv4_A 131 DENDVVKGIVSLSDILQALVL 151 (152)
T ss_dssp CTTSBEEEEEEHHHHHHHHC-
T ss_pred CCCCeEEEEEEHHHHHHHHHh
Confidence 788999999999999999875
No 47
>1zfj_A Inosine monophosphate dehydrogenase; IMPDH, CBS domains, oxidoreductase; HET: IMP; 1.90A {Streptococcus pyogenes} SCOP: c.1.5.1 d.37.1.1
Probab=99.15 E-value=1.2e-10 Score=124.51 Aligned_cols=151 Identities=13% Similarity=0.177 Sum_probs=110.8
Q ss_pred ccCHHHHHHHHHhhccccCCCCCCC-----hhHHHHHhhcccccccccccccccCcceEEEeCCCChHHHHHHHHHHcCC
Q 011147 165 LLRRAELKTLVDMHGNEAGKGGELT-----HDETTIITGALDMTQKTAKDAMTAMSKIFSLDINSRLDEKTMGLIISNGH 239 (492)
Q Consensus 165 ~~s~eEL~~lv~~~~~e~~~~g~L~-----~~E~~iI~~vl~l~~~~V~diMtPr~~v~~l~~~~tl~~e~~~~i~~~~~ 239 (492)
.++++||..++...+ ..|.+. +++++++++++++ +++|++ ++++++.++++. ++++.+.++++
T Consensus 54 ~vt~~eLa~av~~~G----g~G~i~~~~~~e~~~~~i~~v~~~-----~~im~~--~~~~v~~~~tv~-ea~~~m~~~~~ 121 (491)
T 1zfj_A 54 TVTGSKMAIAIARAG----GLGVIHKNMSITEQAEEVRKVKRS-----ENGVII--DPFFLTPEHKVS-EAEELMQRYRI 121 (491)
T ss_dssp TTCSHHHHHHHHHTT----CEEEECCSSCHHHHHHHHHHHHHH-----TTTTSS--SCCCBCSSSBHH-HHHHHHHHTTC
T ss_pred hccHHHHHHHHHHcC----CceEEeCCCCHHHHHHHHHHHhhH-----HhcCcC--CCeEECCCCcHH-HHHHHHHHcCC
Confidence 578889999887432 223444 6788899888764 679997 788899999998 99999999999
Q ss_pred ccceEEeC-CCCceEEEEEccchHHHHHHhhccchhhHHhhhccCCCcccccccchhhhhhccccccccccccCCCCCCC
Q 011147 240 SRVPIYVG-TPTNIIGAILGHSHMAVVVKCKNDSKEIAEMEKSKAPMQHDININSNLKQRQGELKGNVQNEQFNAYMNSP 318 (492)
Q Consensus 240 SRiPV~~~-~~d~IvGiv~~~d~m~~vvk~l~~~~~~~~~~~~~~~v~~v~~~~~~~~~~~~~~~~~~~~~~vp~~~~~~ 318 (492)
+++||+++ +.++++|+|+.+|+ .+. . ..+.+++++ +.+ ..+.+++.+.
T Consensus 122 ~~~pVvd~~~~~~lvGivt~~Dl----~~~-~---------~~~~~v~~i-------------m~~-~~~~~v~~~~--- 170 (491)
T 1zfj_A 122 SGVPIVETLANRKLVGIITNRDM----RFI-S---------DYNAPISEH-------------MTS-EHLVTAAVGT--- 170 (491)
T ss_dssp SEEEEESCTTTCBEEEEEEHHHH----HHC-S---------CSSSBTTTS-------------CCC-SCCCCEETTC---
T ss_pred CEEEEEEeCCCCEEEEEEEHHHH----hhh-c---------cCCCcHHHH-------------cCC-CCCEEECCCC---
Confidence 99999973 45899999995543 221 1 113344444 111 0112233332
Q ss_pred CcccchhhhhhhhhhhhhHHHHHHHHhHcCcc-eEEecccCCCCCCCcEEEEechhHHHHHHcc
Q 011147 319 SVISSDIDIQSSMAKSADLHLCLKKWERQDVK-ISKEELESLPSVDEEVIGIITLEDVMEELLQ 381 (492)
Q Consensus 319 ~~~~~~l~~~~~~~~~~dl~~~l~~~~~~~~~-~lVv~~~~~pde~g~vvGIITlEDViEeLlg 381 (492)
++.++++.|++.+.+ ++|+ |++|+++|+||.+||++.+..
T Consensus 171 -----------------~l~~a~~~m~~~~~~~lpVV------d~~g~lvGivt~~Dil~~~~~ 211 (491)
T 1zfj_A 171 -----------------DLETAERILHEHRIEKLPLV------DNSGRLSGLITIKDIEKVIEF 211 (491)
T ss_dssp -----------------CHHHHHHHHHHTTCSEEEEE------CTTSBEEEEEEHHHHHHHHHC
T ss_pred -----------------CHHHHHHHHHHcCCCEEEEE------cCCCcEEEEEEHHHHHHHHhc
Confidence 366789999999999 9999 889999999999999999874
No 48
>3org_A CMCLC; transporter, transport protein; 3.50A {Cyanidioschyzon merolae}
Probab=99.14 E-value=6.8e-12 Score=138.36 Aligned_cols=59 Identities=17% Similarity=0.174 Sum_probs=52.8
Q ss_pred cccccccccccCcceEEEeCCCChHHHHHHHHH-HcCCccceEEeCCCCceEEEEEccchHH
Q 011147 203 TQKTAKDAMTAMSKIFSLDINSRLDEKTMGLII-SNGHSRVPIYVGTPTNIIGAILGHSHMA 263 (492)
Q Consensus 203 ~~~~V~diMtPr~~v~~l~~~~tl~~e~~~~i~-~~~~SRiPV~~~~~d~IvGiv~~~d~m~ 263 (492)
++.+|+|+|+||.++.+++.+++++ |+.+.+. +++|+++||+|+ .++++|+|+.+|+.+
T Consensus 451 ~~~~V~diM~p~~~v~~v~~~~t~~-e~~~~~~~~~~~~~~PVvd~-~~~lvGiVt~~DL~~ 510 (632)
T 3org_A 451 PEMTAREIMHPIEGEPHLFPDSEPQ-HIKGILEKFPNRLVFPVIDA-NGYLLGAISRKEIVD 510 (632)
T ss_dssp TTSBHHHHCBCTTTSCCBCSSSCHH-HHHHHHHHSTTCCEECBBCT-TCBBCCEESHHHHTT
T ss_pred ccCcHHHHhhcCCCceEecCCCcHH-HHHHHHHhcCCcceEEEEec-CCeEEEEEEHHHHHH
Confidence 6789999999999999999999998 9999999 799999999975 478999999666543
No 49
>3t4n_C Nuclear protein SNF4; CBS domain, nucleotide binding, cytosol, protein binding; HET: ADP; 2.30A {Saccharomyces cerevisiae} PDB: 3tdh_C* 3te5_C* 2qlv_C
Probab=99.13 E-value=1.8e-10 Score=115.07 Aligned_cols=135 Identities=11% Similarity=0.114 Sum_probs=96.1
Q ss_pred cccccccccc---cccCcceEEEeCCCChHHHHHHHHHHcCCccceEEeCCCCceEEEEEccchHHHHHHhhccchhhHH
Q 011147 201 DMTQKTAKDA---MTAMSKIFSLDINSRLDEKTMGLIISNGHSRVPIYVGTPTNIIGAILGHSHMAVVVKCKNDSKEIAE 277 (492)
Q Consensus 201 ~l~~~~V~di---MtPr~~v~~l~~~~tl~~e~~~~i~~~~~SRiPV~~~~~d~IvGiv~~~d~m~~vvk~l~~~~~~~~ 277 (492)
.+.+.+|+++ |+ .++.+++.++++. ++++.+.+++++++||+++ .++++|+|+.+|+++.+......
T Consensus 183 ~~~~~~v~~~~~~m~--~~~~~v~~~~~~~-~~~~~m~~~~~~~~pVvd~-~~~~~Giit~~dl~~~~~~~~~~------ 252 (323)
T 3t4n_C 183 HFLKIPIGDLNIITQ--DNMKSCQMTTPVI-DVIQMLTQGRVSSVPIIDE-NGYLINVYEAYDVLGLIKGGIYN------ 252 (323)
T ss_dssp GGCCSBGGGTTCSBC--TTCCCBCTTSBHH-HHHHHHHHHTCSEEEEECT-TCBEEEEEETTHHHHHHHTTHHH------
T ss_pred hhhhCcHHHcCCCCC--CCcEEECCCCcHH-HHHHHHHHcCCCEEEEECC-CCeEEEEEeHHHHHHHHhhchhh------
Confidence 3556789999 65 4778899999998 9999999999999999975 37899999988876655432210
Q ss_pred hhhccCCCcccccccchhhhhhccccccccccccCCCCCCCCcccchhhhhhhhhhhhhHHHHHHHHhHcCcc-eEEecc
Q 011147 278 MEKSKAPMQHDININSNLKQRQGELKGNVQNEQFNAYMNSPSVISSDIDIQSSMAKSADLHLCLKKWERQDVK-ISKEEL 356 (492)
Q Consensus 278 ~~~~~~~v~~v~~~~~~~~~~~~~~~~~~~~~~vp~~~~~~~~~~~~l~~~~~~~~~~dl~~~l~~~~~~~~~-~lVv~~ 356 (492)
..+.++++++.-.+.+ . ...+.++.+. ++.++++.|.+++.+ ++|+
T Consensus 253 --~~~~~v~~~m~~~~~~------~---~~~~~v~~~~--------------------~l~~~~~~m~~~~~~~l~Vv-- 299 (323)
T 3t4n_C 253 --DLSLSVGEALMRRSDD------F---EGVYTCTKND--------------------KLSTIMDNIRKARVHRFFVV-- 299 (323)
T ss_dssp --HTTSBHHHHGGGSCTT------C---CCCEEECTTC--------------------BHHHHHHHHHHSCCCEEEEE--
T ss_pred --hccCCHHHHHhhcccc------C---CCCEEECCCC--------------------CHHHHHHHHHHhCCCEEEEE--
Confidence 1123344431100000 0 0111123322 377889999999999 9999
Q ss_pred cCCCCCCCcEEEEechhHHHHHHccC
Q 011147 357 ESLPSVDEEVIGIITLEDVMEELLQE 382 (492)
Q Consensus 357 ~~~pde~g~vvGIITlEDViEeLlge 382 (492)
|++|+++||||..||++.++++
T Consensus 300 ----d~~~~l~Giit~~Dil~~l~~~ 321 (323)
T 3t4n_C 300 ----DDVGRLVGVLTLSDILKYILLG 321 (323)
T ss_dssp ----CTTSBEEEEEEHHHHHHHHHHC
T ss_pred ----CCCCcEEEEEEHHHHHHHHHhc
Confidence 7899999999999999999983
No 50
>4fxs_A Inosine-5'-monophosphate dehydrogenase; structural genomics, IMPDH, IMP, mycophenolic acid, MOA; HET: IMP MOA; 2.24A {Vibrio cholerae o1 biovar el tor}
Probab=99.10 E-value=2.3e-11 Score=130.59 Aligned_cols=150 Identities=13% Similarity=0.150 Sum_probs=98.6
Q ss_pred cccCHHHHHHHHHhhccccCCCCCC-----ChhHHHHHhhcccccccccccccccCcceEEEeCCCChHHHHHHHHHHcC
Q 011147 164 ALLRRAELKTLVDMHGNEAGKGGEL-----THDETTIITGALDMTQKTAKDAMTAMSKIFSLDINSRLDEKTMGLIISNG 238 (492)
Q Consensus 164 ~~~s~eEL~~lv~~~~~e~~~~g~L-----~~~E~~iI~~vl~l~~~~V~diMtPr~~v~~l~~~~tl~~e~~~~i~~~~ 238 (492)
..+|++++...+...+ .-|.| .+++.++++++ ++++++|+ .++++++.++++. ++++.+.+++
T Consensus 52 dtVTe~~ma~a~a~~G----GiGvI~~n~s~e~qa~~V~~V-----k~~~~~m~--~d~v~v~~~~tv~-ea~~~m~~~~ 119 (496)
T 4fxs_A 52 DTVTEARLAIALAQEG----GIGFIHKNMSIEQQAAQVHQV-----KIFEAGVV--THPVTVRPEQTIA-DVMELTHYHG 119 (496)
T ss_dssp TTTCSHHHHHHHHHHT----CEEEECSSSCHHHHHHHHHHH-----HHCCC--C--BCCCCBCSSSBHH-HHHHHHTSSC
T ss_pred chhhHHHHHHHHHHcC----CcceecCCCCHHHHHHHHHhc-----cccccccc--cCceEECCCCCHH-HHHHHHHHcC
Confidence 3578999998887432 12444 56778999998 67789998 4788999999998 9999999999
Q ss_pred CccceEEeCCCCceEEEEEccchHHHHHHhhccchhhHHhhhccCCCcccccccchhhhhhccccccccccccCCCCCCC
Q 011147 239 HSRVPIYVGTPTNIIGAILGHSHMAVVVKCKNDSKEIAEMEKSKAPMQHDININSNLKQRQGELKGNVQNEQFNAYMNSP 318 (492)
Q Consensus 239 ~SRiPV~~~~~d~IvGiv~~~d~m~~vvk~l~~~~~~~~~~~~~~~v~~v~~~~~~~~~~~~~~~~~~~~~~vp~~~~~~ 318 (492)
|+++||++++ ++++|+|+.+| +.... ..+.+++++ +++.....++++..+
T Consensus 120 ~s~~PVvd~~-~~lvGiVt~rD--------L~~~~------~~~~~v~di-------------M~p~~~~vtv~~~~~-- 169 (496)
T 4fxs_A 120 FAGFPVVTEN-NELVGIITGRD--------VRFVT------DLTKSVAAV-------------MTPKERLATVKEGAT-- 169 (496)
T ss_dssp CCEEEEECSS-SBEEEEEEHHH--------HTTCC------CTTSBGGGT-------------SEEGGGCCEEECC----
T ss_pred CcEEEEEccC-CEEEEEEEHHH--------Hhhcc------cCCCcHHHH-------------hcCCCCCEEECCCCC--
Confidence 9999999864 89999999444 22110 112334443 110011233455543
Q ss_pred CcccchhhhhhhhhhhhhHHHHHHHHhHcCcc-eEEecccCCCCCCCcEEEEechhHHHHHH
Q 011147 319 SVISSDIDIQSSMAKSADLHLCLKKWERQDVK-ISKEELESLPSVDEEVIGIITLEDVMEEL 379 (492)
Q Consensus 319 ~~~~~~l~~~~~~~~~~dl~~~l~~~~~~~~~-~lVv~~~~~pde~g~vvGIITlEDViEeL 379 (492)
+.++++.|++++.+ ++|+ |++|+++|+||++|+++..
T Consensus 170 ------------------l~ea~~~m~~~~i~~lpVV------De~G~l~GiIT~~DIl~~~ 207 (496)
T 4fxs_A 170 ------------------GAEVQEKMHKARVEKILVV------NDEFQLKGMITAKDFHKAE 207 (496)
T ss_dssp --------------------CGGGTCC---CCCEEEE------CTTSBCCEEECCC-----C
T ss_pred ------------------HHHHHHHHHHcCCCEEEEE------cCCCCEEEeehHhHHHHhh
Confidence 33458899999999 9999 8999999999999999875
No 51
>2d4z_A Chloride channel protein; CLC chloride channel cytoplasmic domain, CBS domains, ION CH regulatory subunit, transport protein; 3.10A {Torpedo marmorata} SCOP: d.37.1.1
Probab=99.09 E-value=6.1e-10 Score=109.33 Aligned_cols=65 Identities=11% Similarity=0.124 Sum_probs=55.7
Q ss_pred cccccccccccccCcceEEEeCCCChHHHHHHHHHHcCCccceEEeCCC-CceEEEEEccchHHHHHHh
Q 011147 201 DMTQKTAKDAMTAMSKIFSLDINSRLDEKTMGLIISNGHSRVPIYVGTP-TNIIGAILGHSHMAVVVKC 268 (492)
Q Consensus 201 ~l~~~~V~diMtPr~~v~~l~~~~tl~~e~~~~i~~~~~SRiPV~~~~~-d~IvGiv~~~d~m~~vvk~ 268 (492)
...+.+|+|+|++ +++++..++++. ++.+++.++++++|||++++. +.++|+|..+|+++.+.+.
T Consensus 9 ~~~~~~v~diMt~--~vvtv~~~~tv~-~~~~lm~~~~~~~~PVVd~~~~~~LvGiIt~~dl~~~l~~~ 74 (250)
T 2d4z_A 9 NKYNIQVGDIMVR--DVTSIASTSTYG-DLLHVLRQTKLKFFPFVDTPDTNTLLGSIDRTEVEGLLQRR 74 (250)
T ss_dssp CCSSCBTTSSSBS--SCCCEETTCBHH-HHHHHHHHCCCSEEEEESCTTTCBEEEEEEHHHHHHHHHHH
T ss_pred ccCCCChHHhcCC--CCeEECCCCCHH-HHHHHHHhcCCCEEEEEecCCCCeEEEEEEHHHHHHHHHHh
Confidence 4567899999985 789999999998 999999999999999998642 5699999999887766544
No 52
>3ddj_A CBS domain-containing protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: AMP; 1.80A {Sulfolobus solfataricus} SCOP: d.37.1.1 d.37.1.1
Probab=99.09 E-value=3.3e-10 Score=111.68 Aligned_cols=149 Identities=15% Similarity=0.195 Sum_probs=103.4
Q ss_pred ccCHHHHHHHHHhhccccCCCCCCChhHHHHHhhcccccccccccccccCcceEEEeCCCChHHHHHHHHHHcCCccceE
Q 011147 165 LLRRAELKTLVDMHGNEAGKGGELTHDETTIITGALDMTQKTAKDAMTAMSKIFSLDINSRLDEKTMGLIISNGHSRVPI 244 (492)
Q Consensus 165 ~~s~eEL~~lv~~~~~e~~~~g~L~~~E~~iI~~vl~l~~~~V~diMtPr~~v~~l~~~~tl~~e~~~~i~~~~~SRiPV 244 (492)
.+|.+||...+.. +. .. .+...+.+++.+.+|+++|++ ++++++.++++. ++++.+.+++++++||
T Consensus 64 ivT~~Di~~~~~~----~~---~~----~~~~~~~~~~~~~~v~~im~~--~~~~v~~~~~~~-~a~~~m~~~~~~~lpV 129 (296)
T 3ddj_A 64 LLTTRDLLSTVES----YC---KD----SCSQGDLYHISTTPIIDYMTP--NPVTVYNTSDEF-TAINIMVTRNFGSLPV 129 (296)
T ss_dssp EEEHHHHHGGGTT----CC----------CCHHHHHHHHTSBGGGTSEE--SCCCEETTSCHH-HHHHHHHHHTCSEEEE
T ss_pred EEeHHHHHHHhcc----cc---cc----cccchhhHHHhcccHHHhccC--CCEEEcCCCCHH-HHHHHHHHcCCCEEEE
Confidence 4677887776641 10 00 334555566778999999997 678899999998 9999999999999999
Q ss_pred EeCCCCceEEEEEccchHHHHHHhhccchhhHHhhhccCCCcccccccchhhhhhccccccccccccCCCCCCCCcccch
Q 011147 245 YVGTPTNIIGAILGHSHMAVVVKCKNDSKEIAEMEKSKAPMQHDININSNLKQRQGELKGNVQNEQFNAYMNSPSVISSD 324 (492)
Q Consensus 245 ~~~~~d~IvGiv~~~d~m~~vvk~l~~~~~~~~~~~~~~~v~~v~~~~~~~~~~~~~~~~~~~~~~vp~~~~~~~~~~~~ 324 (492)
+++ .++++|+++.+|+ ++.+... ....+++++ +.+.. ..++.+.
T Consensus 130 vd~-~~~lvGivt~~dl----~~~~~~~-------~~~~~v~~~-------------m~~~~--~~v~~~~--------- 173 (296)
T 3ddj_A 130 VDI-NDKPVGIVTEREF----LLLYKDL-------DEIFPVKVF-------------MSTKV--QTIYKEV--------- 173 (296)
T ss_dssp ECT-TSCEEEEEEHHHH----GGGGGGS-------CCCCBHHHH-------------SBCSC--CCEETTS---------
T ss_pred EcC-CCcEEEEEeHHHH----HHhhhcc-------cccccHHHh-------------hcCCC--eEECCCC---------
Confidence 975 3789999995543 3332211 011222222 11111 1123322
Q ss_pred hhhhhhhhhhhhHHHHHHHHhHcCcc-eEEecccCCCCCCCcEEEEechhHHHHHHc
Q 011147 325 IDIQSSMAKSADLHLCLKKWERQDVK-ISKEELESLPSVDEEVIGIITLEDVMEELL 380 (492)
Q Consensus 325 l~~~~~~~~~~dl~~~l~~~~~~~~~-~lVv~~~~~pde~g~vvGIITlEDViEeLl 380 (492)
++.++++.|.+.+.+ ++|+ |++|+++|+||.+|+++.+.
T Consensus 174 -----------~l~~~~~~m~~~~~~~~~Vv------d~~~~~~Givt~~dl~~~~~ 213 (296)
T 3ddj_A 174 -----------RLDQAVKLMLRRGFRRLPVI------DDDNKVVGIVTVVNAIKQLA 213 (296)
T ss_dssp -----------BHHHHHHHHHHHTCSEEEEE------CTTSCEEEEEEHHHHHHHHH
T ss_pred -----------CHHHHHHHHHHcCCCEEEEE------cCCCEEEEEEEHHHHHHHHH
Confidence 366789999999998 9999 78999999999999999886
No 53
>3ddj_A CBS domain-containing protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: AMP; 1.80A {Sulfolobus solfataricus} SCOP: d.37.1.1 d.37.1.1
Probab=99.07 E-value=3.6e-10 Score=111.40 Aligned_cols=132 Identities=15% Similarity=0.182 Sum_probs=94.1
Q ss_pred ccccccccccccCcceEEEeCCCChHHHHHHHHHHcCCccceEEeCCCCceEEEEEccchHHHHHHhhccchhhHHhhhc
Q 011147 202 MTQKTAKDAMTAMSKIFSLDINSRLDEKTMGLIISNGHSRVPIYVGTPTNIIGAILGHSHMAVVVKCKNDSKEIAEMEKS 281 (492)
Q Consensus 202 l~~~~V~diMtPr~~v~~l~~~~tl~~e~~~~i~~~~~SRiPV~~~~~d~IvGiv~~~d~m~~vvk~l~~~~~~~~~~~~ 281 (492)
..+.+|+++|++ ++.+++.++++. ++++.+.+++++++||+++ .++++|+|+.+|+++.+.+....... ....
T Consensus 153 ~~~~~v~~~m~~--~~~~v~~~~~l~-~~~~~m~~~~~~~~~Vvd~-~~~~~Givt~~dl~~~~~~~~~~~~~---~~~~ 225 (296)
T 3ddj_A 153 DEIFPVKVFMST--KVQTIYKEVRLD-QAVKLMLRRGFRRLPVIDD-DNKVVGIVTVVNAIKQLAKAVDKLDP---DYFY 225 (296)
T ss_dssp CCCCBHHHHSBC--SCCCEETTSBHH-HHHHHHHHHTCSEEEEECT-TSCEEEEEEHHHHHHHHHHHHHHTCT---HHHH
T ss_pred cccccHHHhhcC--CCeEECCCCCHH-HHHHHHHHcCCCEEEEEcC-CCEEEEEEEHHHHHHHHHHHHhhcCh---hhhc
Confidence 346689999985 678899999998 9999999999999999974 37899999977766555432211000 0001
Q ss_pred cCCCcccccccchhhhhhccccccccccccCCCCCCCCcccchhhhhhhhhhhhhHHHHHHHHhHcCcc-eEEecccCCC
Q 011147 282 KAPMQHDININSNLKQRQGELKGNVQNEQFNAYMNSPSVISSDIDIQSSMAKSADLHLCLKKWERQDVK-ISKEELESLP 360 (492)
Q Consensus 282 ~~~v~~v~~~~~~~~~~~~~~~~~~~~~~vp~~~~~~~~~~~~l~~~~~~~~~~dl~~~l~~~~~~~~~-~lVv~~~~~p 360 (492)
+.++.++ +.+. +..++.+. ++.++++.|.+.+.+ ++|+
T Consensus 226 ~~~v~~~-------------m~~~--~~~v~~~~--------------------~l~~a~~~m~~~~~~~l~Vv------ 264 (296)
T 3ddj_A 226 GKVVKDV-------------MVTN--LVTIDELA--------------------SVNRAAAEMIVKRIGSLLIL------ 264 (296)
T ss_dssp TCBHHHH-------------SBCC--CCBCCTTS--------------------BHHHHHHHHHHHTCSEEEEE------
T ss_pred CcCHHHH-------------hCCC--CeEECCCC--------------------cHHHHHHHHHHcCCCEEEEE------
Confidence 1222222 1111 11123222 377889999999999 9999
Q ss_pred CCCCcEEEEechhHHHHHHcc
Q 011147 361 SVDEEVIGIITLEDVMEELLQ 381 (492)
Q Consensus 361 de~g~vvGIITlEDViEeLlg 381 (492)
|++|+++||||..||++.+.+
T Consensus 265 d~~g~~~Giit~~Dil~~l~~ 285 (296)
T 3ddj_A 265 NKDNTIRGIITERDLLIALHH 285 (296)
T ss_dssp CTTSCEEEEEEHHHHHHHHHH
T ss_pred CCCCeEEEEEcHHHHHHHHHH
Confidence 789999999999999999987
No 54
>3pc3_A CG1753, isoform A; CBS, synthase, PLP, heme, aminoacrylate, lyase; HET: HEM P1T; 1.55A {Drosophila melanogaster} PDB: 3pc2_A* 3pc4_A*
Probab=99.07 E-value=2.6e-10 Score=123.04 Aligned_cols=126 Identities=11% Similarity=0.083 Sum_probs=91.8
Q ss_pred ccccccccccccCcceEEEeCC-CChHHHHHHHHHHcCCccceEEeCCCCceEEEEEccchHHHHHHhhccchhhHHhhh
Q 011147 202 MTQKTAKDAMTAMSKIFSLDIN-SRLDEKTMGLIISNGHSRVPIYVGTPTNIIGAILGHSHMAVVVKCKNDSKEIAEMEK 280 (492)
Q Consensus 202 l~~~~V~diMtPr~~v~~l~~~-~tl~~e~~~~i~~~~~SRiPV~~~~~d~IvGiv~~~d~m~~vvk~l~~~~~~~~~~~ 280 (492)
+.+.+|+|+|++ ++++++.+ +++. ++++.+.+++++++||++++.++++|+|+.+|+++.+..... .
T Consensus 381 l~~~~V~diM~~--~~vtv~~~~~tv~-ea~~~m~~~~~~~lpVvd~~~g~lvGiVt~~Dll~~l~~~~~---------~ 448 (527)
T 3pc3_A 381 WWSLAIAELELP--APPVILKSDATVG-EAIALMKKHRVDQLPVVDQDDGSVLGVVGQETLITQIVSMNR---------Q 448 (527)
T ss_dssp TTTSBGGGGCCC--CCSCCEETTCBHH-HHHHHHHHHTCSEEEEECTTTCCEEEEEEHHHHHHHHHHHCC---------C
T ss_pred ccCCcHHHhCcC--CCeEEcCCCCcHH-HHHHHHHHcCCCeEEEEECCCCEEEEEEEHHHHHHHHHhccC---------c
Confidence 557899999985 77889999 9998 999999999999999998445789999997776665554321 1
Q ss_pred ccCCCcccccccchhhhhhccccccccccccCCCCCCCCcccchhhhhhhhhhhhhHHHHHHHHhHcCcceEEecccCCC
Q 011147 281 SKAPMQHDININSNLKQRQGELKGNVQNEQFNAYMNSPSVISSDIDIQSSMAKSADLHLCLKKWERQDVKISKEELESLP 360 (492)
Q Consensus 281 ~~~~v~~v~~~~~~~~~~~~~~~~~~~~~~vp~~~~~~~~~~~~l~~~~~~~~~~dl~~~l~~~~~~~~~~lVv~~~~~p 360 (492)
.+.+++++ |.+.. ..++.+. ++.++++.|.+.+. ++|+
T Consensus 449 ~~~~V~~i-------------m~~~~--~~v~~~~--------------------~l~~a~~~m~~~~~-~pVV------ 486 (527)
T 3pc3_A 449 QSDPAIKA-------------LNKRV--IRLNESE--------------------ILGKLARVLEVDPS-VLIL------ 486 (527)
T ss_dssp TTSBGGGG-------------EETTC--CEEETTS--------------------BHHHHHHHHTTCSE-EEEE------
T ss_pred CCCcHHHH-------------hcCCC--eEECCCC--------------------cHHHHHHHHhhCCE-EEEE------
Confidence 13344444 21111 1123332 36677899965443 7788
Q ss_pred CC----CCcEEEEechhHHHHHHcc
Q 011147 361 SV----DEEVIGIITLEDVMEELLQ 381 (492)
Q Consensus 361 de----~g~vvGIITlEDViEeLlg 381 (492)
|+ +|+++||||.+||++.|..
T Consensus 487 d~~~~~~g~lvGIVT~~Dll~~l~~ 511 (527)
T 3pc3_A 487 GKNPAGKVELKALATKLDVTTFIAA 511 (527)
T ss_dssp EECSSSCEEEEEEEEHHHHHHHHHT
T ss_pred eCCcccCCeEEEEEEHHHHHHHHHh
Confidence 55 4899999999999999986
No 55
>3kh5_A Protein MJ1225; AMPK, AMP, ADP, ATP, CBS domain, archaea, unknown function; HET: ADP AMP; 2.10A {Methanocaldococcus jannaschii} PDB: 3lfz_A*
Probab=99.03 E-value=9.8e-10 Score=106.62 Aligned_cols=137 Identities=14% Similarity=0.211 Sum_probs=86.9
Q ss_pred cccc-ccccCcceEEEeCCCChHHHHHHHHHHcCCccceEEeCCCCceEEEEEccchHHHHHHhhccchhhHHhhhccCC
Q 011147 206 TAKD-AMTAMSKIFSLDINSRLDEKTMGLIISNGHSRVPIYVGTPTNIIGAILGHSHMAVVVKCKNDSKEIAEMEKSKAP 284 (492)
Q Consensus 206 ~V~d-iMtPr~~v~~l~~~~tl~~e~~~~i~~~~~SRiPV~~~~~d~IvGiv~~~d~m~~vvk~l~~~~~~~~~~~~~~~ 284 (492)
++++ +|++ ++++++.++++. ++++.+.+++++++||++++.++++|+++.+|+++ .+......... . +..
T Consensus 4 ~v~~~i~~~--~~~~v~~~~sl~-~a~~~m~~~~~~~lpV~d~~~~~~~Givt~~di~~----~~~~~~~~~~~-~-~~~ 74 (280)
T 3kh5_A 4 RVMKIAQNK--KIVTVYPTTTIR-KALMTMNENKYRRLPVVNAGNNKVVGIITSMDIVD----FMGGGSKYNLI-R-EKH 74 (280)
T ss_dssp BGGGTSCCS--CCCCBCTTSBHH-HHHHHHHHHCCCEEEEECTTTCBEEEEEEHHHHHH----HTTTSGGGHHH-H-TTS
T ss_pred hHHHHhcCC--CcEEECCCCcHH-HHHHHHHhCCCcEeeEEECCCCeEEEEEEHHHHHH----Hhcccchhhhh-h-hcc
Confidence 3445 4554 789999999998 99999999999999999865689999999665543 32211000000 0 000
Q ss_pred CcccccccchhhhhhccccccccccccCCCCCCCCcccchhhhhhhhhhhhhHHHHHHHHhHcCcc-eEEecccCCCCCC
Q 011147 285 MQHDININSNLKQRQGELKGNVQNEQFNAYMNSPSVISSDIDIQSSMAKSADLHLCLKKWERQDVK-ISKEELESLPSVD 363 (492)
Q Consensus 285 v~~v~~~~~~~~~~~~~~~~~~~~~~vp~~~~~~~~~~~~l~~~~~~~~~~dl~~~l~~~~~~~~~-~lVv~~~~~pde~ 363 (492)
...+ ........+.++.. ....++.+. ++.++++.|.+++.+ ++|+ |++
T Consensus 75 ~~~~---~~~~~~~v~~im~~-~~~~v~~~~--------------------~~~~a~~~~~~~~~~~~~Vv------d~~ 124 (280)
T 3kh5_A 75 ERNF---LAAINEPVREIMEE-NVITLKENA--------------------DIDEAIETFLTKNVGGAPIV------NDE 124 (280)
T ss_dssp TTCH---HHHTTSBGGGTSBC-SCCCEETTC--------------------BHHHHHHHHHHTTCSEEEEE------CTT
T ss_pred ccch---hHHhhhhHHHhcCC-CCEEECCCC--------------------CHHHHHHHHHhCCCCEEEEE------cCC
Confidence 0000 00000111111111 111123322 366789999999988 9999 789
Q ss_pred CcEEEEechhHHHHHHcc
Q 011147 364 EEVIGIITLEDVMEELLQ 381 (492)
Q Consensus 364 g~vvGIITlEDViEeLlg 381 (492)
|+++||||.+|+++.+.+
T Consensus 125 ~~~~Givt~~dl~~~~~~ 142 (280)
T 3kh5_A 125 NQLISLITERDVIRALLD 142 (280)
T ss_dssp CBEEEEEEHHHHHHHHGG
T ss_pred CEEEEEEEHHHHHHHHhh
Confidence 999999999999999876
No 56
>3usb_A Inosine-5'-monophosphate dehydrogenase; structural genomics, center for structural genomics of infec diseases, csgid, TIM barrel, CBS-domain; HET: MSE IMP; 2.38A {Bacillus anthracis} PDB: 3tsd_A* 3tsb_A*
Probab=99.03 E-value=2.9e-10 Score=122.44 Aligned_cols=151 Identities=12% Similarity=0.130 Sum_probs=104.9
Q ss_pred ccCHHHHHHHHHhhccccCCCCCCC-----hhHHHHHhhcccccccccccccccCcceEEEeCCCChHHHHHHHHHHcCC
Q 011147 165 LLRRAELKTLVDMHGNEAGKGGELT-----HDETTIITGALDMTQKTAKDAMTAMSKIFSLDINSRLDEKTMGLIISNGH 239 (492)
Q Consensus 165 ~~s~eEL~~lv~~~~~e~~~~g~L~-----~~E~~iI~~vl~l~~~~V~diMtPr~~v~~l~~~~tl~~e~~~~i~~~~~ 239 (492)
.++++++...+...+. -|.|. +++.++++.+.. ++++|++ ++++++.++++. ++++.+.+++|
T Consensus 77 tvTe~~lAia~a~~Gg----iGvIh~~~~~~~q~~~V~~V~~-----~~~~m~~--d~v~l~~~~tv~-ea~~~m~~~~~ 144 (511)
T 3usb_A 77 TVTEADMAIAMARQGG----LGIIHKNMSIEQQAEQVDKVKR-----SESGVIS--DPFFLTPEHQVY-DAEHLMGKYRI 144 (511)
T ss_dssp TTCSHHHHHHHHHHTC----EEEECSSSCHHHHHHHHHHHHT-----SSSCSSS--SCCCBCTTSBHH-HHHHHHHHHCC
T ss_pred hhcHHHHHHHHHhcCC----ceeecccCCHHHHHHHHHHhhc-----ccccccc--CCEEECCCCCHH-HHHHHHHHcCC
Confidence 5688999877764221 13332 344556666654 4466764 778899999998 99999999999
Q ss_pred ccceEEeC-CCCceEEEEEccchHHHHHHhhccchhhHHhhhccCCCcccccccchhhhhhccccccccccccCCCCCCC
Q 011147 240 SRVPIYVG-TPTNIIGAILGHSHMAVVVKCKNDSKEIAEMEKSKAPMQHDININSNLKQRQGELKGNVQNEQFNAYMNSP 318 (492)
Q Consensus 240 SRiPV~~~-~~d~IvGiv~~~d~m~~vvk~l~~~~~~~~~~~~~~~v~~v~~~~~~~~~~~~~~~~~~~~~~vp~~~~~~ 318 (492)
+++||+++ ..++++|+|+.+| +.... ..+.+++++ |++ ...+++|...
T Consensus 145 s~~pVvd~g~~~~lvGiVt~rD--------l~~~~------~~~~~V~~v-------------M~~-~~~vtv~~~~--- 193 (511)
T 3usb_A 145 SGVPVVNNLDERKLVGIITNRD--------MRFIQ------DYSIKISDV-------------MTK-EQLITAPVGT--- 193 (511)
T ss_dssp SEEEEESCTTTCBEEEEEEHHH--------HTTCC------CSSSBHHHH-------------CCC-CCCCCEETTC---
T ss_pred cEEEEEecCCCCEEEEEEEehH--------hhhhc------cCCCcHHHh-------------ccc-CCCEEECCCC---
Confidence 99999975 1479999999444 22110 112333333 211 1223345443
Q ss_pred CcccchhhhhhhhhhhhhHHHHHHHHhHcCcc-eEEecccCCCCCCCcEEEEechhHHHHHHcc
Q 011147 319 SVISSDIDIQSSMAKSADLHLCLKKWERQDVK-ISKEELESLPSVDEEVIGIITLEDVMEELLQ 381 (492)
Q Consensus 319 ~~~~~~l~~~~~~~~~~dl~~~l~~~~~~~~~-~lVv~~~~~pde~g~vvGIITlEDViEeLlg 381 (492)
++.++++.|++++.+ ++|+ |++|+++|+||++|+++++..
T Consensus 194 -----------------~l~eal~~m~~~~i~~lpVV------De~g~l~GiIT~~Dil~~~~~ 234 (511)
T 3usb_A 194 -----------------TLSEAEKILQKYKIEKLPLV------DNNGVLQGLITIKDIEKVIEF 234 (511)
T ss_dssp -----------------CHHHHHHHHHHHTCSEEEEE------CTTSBEEEEEEHHHHHHHHHC
T ss_pred -----------------CHHHHHHHHHHcCCCEEEEE------eCCCCEeeeccHHHHHHhhhc
Confidence 366789999999999 9999 899999999999999999864
No 57
>1me8_A Inosine-5'-monophosphate dehydrogenase; alpha beta barrel, oxidoreductase; HET: RVP; 1.90A {Tritrichomonas foetus} SCOP: c.1.5.1 PDB: 1ak5_A* 1me7_A* 1me9_A* 1meh_A* 1mei_A* 1mew_A* 1pvn_A* 1lrt_A*
Probab=99.01 E-value=4.2e-11 Score=128.68 Aligned_cols=157 Identities=7% Similarity=0.024 Sum_probs=20.9
Q ss_pred ccCHHHHHHHHHhhccccCCCCCCC-hhHHHHHhhcccccccccccc-cccCcceEEEeCCCChHHHHHHHHHHcCCccc
Q 011147 165 LLRRAELKTLVDMHGNEAGKGGELT-HDETTIITGALDMTQKTAKDA-MTAMSKIFSLDINSRLDEKTMGLIISNGHSRV 242 (492)
Q Consensus 165 ~~s~eEL~~lv~~~~~e~~~~g~L~-~~E~~iI~~vl~l~~~~V~di-MtPr~~v~~l~~~~tl~~e~~~~i~~~~~SRi 242 (492)
.++++++...+...+..+-=...++ +++++++.++.. .++ |+| ++++++.++++. ++++.+.+++|+++
T Consensus 61 ~vt~~~la~~la~~gg~G~I~~~~~~e~~~~~v~~V~~------~e~gM~~--~~~~v~~~~tv~-eal~~m~~~~~s~~ 131 (503)
T 1me8_A 61 SVSGEKMAIALAREGGISFIFGSQSIESQAAMVHAVKN------FKAGFVV--SDSNVKPDQTFA-DVLAISQRTTHNTV 131 (503)
T ss_dssp TTCSHHHHHHHHHTTCEEEECCSSCHHHHHHHHHHHHT------TTC---------------------------------
T ss_pred hhhHHHHHHHHHhCCCcceeeCCCCHHHHHHHHhhhhh------cccCccc--CCeEECCCCcHH-HHHHHHHHcCceEE
Confidence 4678899887764221000000122 466777766544 456 987 889999999998 99999999999999
Q ss_pred eEEeCC--CCceEEEEEccchHHHHHHhhccchhhHHhhhccCCCcccccccchhhhhhccccccccccccCCCCCCCCc
Q 011147 243 PIYVGT--PTNIIGAILGHSHMAVVVKCKNDSKEIAEMEKSKAPMQHDININSNLKQRQGELKGNVQNEQFNAYMNSPSV 320 (492)
Q Consensus 243 PV~~~~--~d~IvGiv~~~d~m~~vvk~l~~~~~~~~~~~~~~~v~~v~~~~~~~~~~~~~~~~~~~~~~vp~~~~~~~~ 320 (492)
||++++ .++++|+|+.+|+... .. ..+.+++++ +.+...+..++.+.+
T Consensus 132 pVvd~~~~~g~lvGiVt~~Dl~~~------~~-------~~~~~V~di-------------M~~~~~~~tv~~~~s---- 181 (503)
T 1me8_A 132 AVTDDGTPHGVLLGLVTQRDYPID------LT-------QTETKVSDM-------------MTPFSKLVTAHQDTK---- 181 (503)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred EEEECCCcCCeEEEEEEHHHHHhh------hc-------cccCcHHHH-------------hCCCCCCEEEcCCCc----
Confidence 999864 3789999997665321 00 112344444 111101222344432
Q ss_pred ccchhhhhhhhhhhhhHHHHHHHHhHcCcc-eEEecccCCCCCCCcEEEEechhHHHHHHccC
Q 011147 321 ISSDIDIQSSMAKSADLHLCLKKWERQDVK-ISKEELESLPSVDEEVIGIITLEDVMEELLQE 382 (492)
Q Consensus 321 ~~~~l~~~~~~~~~~dl~~~l~~~~~~~~~-~lVv~~~~~pde~g~vvGIITlEDViEeLlge 382 (492)
+.++++.|++++.+ ++|+ |++|+++||||++||++.+.+.
T Consensus 182 ----------------l~ea~~~m~~~~i~~lpVV------De~g~lvGiIT~~Dil~~~~~~ 222 (503)
T 1me8_A 182 ----------------LSEANKIIWEKKLNALPII------DDDQHLRYIVFRKDYDRSQVCH 222 (503)
T ss_dssp --------------------------------------------------------------C
T ss_pred ----------------HHHHHHHHHHcCCCEEEEE------cCCCeEEEEEEecHHHHhhhcc
Confidence 55679999999999 9999 7899999999999999999863
No 58
>2cu0_A Inosine-5'-monophosphate dehydrogenase; structural genomics, pyrococcus horikoshii OT3, riken structural genomics/PROT initiative, RSGI; HET: XMP; 2.10A {Pyrococcus horikoshii} SCOP: c.1.5.1
Probab=98.93 E-value=1.5e-10 Score=123.92 Aligned_cols=145 Identities=11% Similarity=0.197 Sum_probs=24.4
Q ss_pred ccCHHHHHHHHHhhccccCCCCCCC-----hhHHHHHhhcccccccccccccccCcceEEEeCCCChHHHHHHHHHHcCC
Q 011147 165 LLRRAELKTLVDMHGNEAGKGGELT-----HDETTIITGALDMTQKTAKDAMTAMSKIFSLDINSRLDEKTMGLIISNGH 239 (492)
Q Consensus 165 ~~s~eEL~~lv~~~~~e~~~~g~L~-----~~E~~iI~~vl~l~~~~V~diMtPr~~v~~l~~~~tl~~e~~~~i~~~~~ 239 (492)
..+++|+...+...+ ..|.+. +++++++.+++++++ +|+ .++++++.++++. ++++.+.+++|
T Consensus 57 ~vt~~ela~ava~~G----glG~i~~~~~~e~~~~~I~~v~~~~~-----~m~--~~~~~v~~~~tv~-ea~~~~~~~~~ 124 (486)
T 2cu0_A 57 TVTEWEMAVAMAREG----GLGVIHRNMGIEEQVEQVKRVKRAER-----LIV--EDVITIAPDETVD-FALFLMEKHGI 124 (486)
T ss_dssp TTCSHHHHHHHHHTT----CEEEECSSSCHHHHHHHHHHHHTCC------------------------------------
T ss_pred eecHHHHHHHHHhcC----CceeecCCCCHHHHHHHHHhhcchhh-----ccc--cCceEECCCCCHH-HHHHHHHHcCC
Confidence 467889988886422 123343 577899999988754 687 4889999999998 99999999999
Q ss_pred ccceEEeCCCCceEEEEEccchHHHHHHhhccchhhHHhhhccCCCcccccccchhhhhhccccccccccccCCCCCCCC
Q 011147 240 SRVPIYVGTPTNIIGAILGHSHMAVVVKCKNDSKEIAEMEKSKAPMQHDININSNLKQRQGELKGNVQNEQFNAYMNSPS 319 (492)
Q Consensus 240 SRiPV~~~~~d~IvGiv~~~d~m~~vvk~l~~~~~~~~~~~~~~~v~~v~~~~~~~~~~~~~~~~~~~~~~vp~~~~~~~ 319 (492)
+++||+++ ++++|+|+.+|+.. + . +.+++++ +.+ .+.+++.+.+
T Consensus 125 ~~~pVvd~--~~lvGivt~~Dl~~-------~----~-----~~~v~~i-------------m~~--~~~~v~~~~~--- 168 (486)
T 2cu0_A 125 DGLPVVED--EKVVGIITKKDIAA-------R----E-----GKLVKEL-------------MTK--EVITVPESIE--- 168 (486)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred cEEEEEEC--CEEEEEEEHHHhcc-------C----C-----CCCHHHH-------------ccC--CCeEECCcCc---
Confidence 99999986 89999999666432 0 0 1233333 111 1222344432
Q ss_pred cccchhhhhhhhhhhhhHHHHHHHHhHcCcc-eEEecccCCCCCCCcEEEEechhHHHHHHc
Q 011147 320 VISSDIDIQSSMAKSADLHLCLKKWERQDVK-ISKEELESLPSVDEEVIGIITLEDVMEELL 380 (492)
Q Consensus 320 ~~~~~l~~~~~~~~~~dl~~~l~~~~~~~~~-~lVv~~~~~pde~g~vvGIITlEDViEeLl 380 (492)
+.++++.|++.+.+ ++|+ |++|+++|+||.+||++++-
T Consensus 169 -----------------l~eal~~m~~~~~~~lpVV------de~g~lvGiiT~~Dil~~~~ 207 (486)
T 2cu0_A 169 -----------------VEEALKIMIENRIDRLPVV------DERGKLVGLITMSDLVARKK 207 (486)
T ss_dssp -------------------------------------------------------------C
T ss_pred -----------------HHHHHHHHHHcCCCEEEEE------ecCCeEEEEEEHHHHHHhhh
Confidence 45678999999999 9999 78999999999999999874
No 59
>1vr9_A CBS domain protein/ACT domain protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI; HET: MSE; 1.70A {Thermotoga maritima} SCOP: d.37.1.1
Probab=98.92 E-value=9e-09 Score=97.72 Aligned_cols=117 Identities=8% Similarity=0.081 Sum_probs=86.6
Q ss_pred cccccccccCcceEEEeCCCChHHHHHHHHHHcCCccceEEeCCCCceEEEEEccchHHHHHHhhccchhhHHhhhccCC
Q 011147 205 KTAKDAMTAMSKIFSLDINSRLDEKTMGLIISNGHSRVPIYVGTPTNIIGAILGHSHMAVVVKCKNDSKEIAEMEKSKAP 284 (492)
Q Consensus 205 ~~V~diMtPr~~v~~l~~~~tl~~e~~~~i~~~~~SRiPV~~~~~d~IvGiv~~~d~m~~vvk~l~~~~~~~~~~~~~~~ 284 (492)
-+++++|++ ++++++.++++. ++++.+.+++++++||+++ .++++|+|+.+|+. +... +.+
T Consensus 13 ~~~~~~~~~--~~~~v~~~~tv~-ea~~~m~~~~~~~~pVvd~-~~~l~Givt~~dl~----~~~~-----------~~~ 73 (213)
T 1vr9_A 13 MKVKKWVTQ--DFPMVEESATVR-ECLHRMRQYQTNECIVKDR-EGHFRGVVNKEDLL----DLDL-----------DSS 73 (213)
T ss_dssp CBGGGGCBS--CSCEEETTCBHH-HHHHHHHHTTSSEEEEECT-TSBEEEEEEGGGGT----TSCT-----------TSB
T ss_pred cCHHHhhcC--CCeEECCCCcHH-HHHHHHHHCCCCEEEEEcC-CCEEEEEEEHHHHH----hhcC-----------CCc
Confidence 468889985 778899999998 9999999999999999974 37899999965532 1111 123
Q ss_pred CcccccccchhhhhhccccccccccccCCCCCCCCcccchhhhhhhhhhhhhHHHHHHHHhHcCcc-eEEecccCCCCCC
Q 011147 285 MQHDININSNLKQRQGELKGNVQNEQFNAYMNSPSVISSDIDIQSSMAKSADLHLCLKKWERQDVK-ISKEELESLPSVD 363 (492)
Q Consensus 285 v~~v~~~~~~~~~~~~~~~~~~~~~~vp~~~~~~~~~~~~l~~~~~~~~~~dl~~~l~~~~~~~~~-~lVv~~~~~pde~ 363 (492)
++++ +.+. +..++.+. ++.++++.|.+.+.+ ++|+ |++
T Consensus 74 v~~i-------------m~~~--~~~v~~~~--------------------~l~~a~~~m~~~~~~~lpVv------d~~ 112 (213)
T 1vr9_A 74 VFNK-------------VSLP--DFFVHEED--------------------NITHALLLFLEHQEPYLPVV------DEE 112 (213)
T ss_dssp SGGG-------------CBCT--TCCEETTS--------------------BHHHHHHHHHHCCCSEEEEE------CTT
T ss_pred HHHH-------------ccCC--CEEECCCC--------------------cHHHHHHHHHHhCCCEEEEE------cCC
Confidence 4433 1111 11123222 366789999999988 9999 778
Q ss_pred CcEEEEechhHHHHHHcc
Q 011147 364 EEVIGIITLEDVMEELLQ 381 (492)
Q Consensus 364 g~vvGIITlEDViEeLlg 381 (492)
|+++||||..|+++.+..
T Consensus 113 g~lvGiit~~Dil~~~~~ 130 (213)
T 1vr9_A 113 MRLKGAVSLHDFLEALIE 130 (213)
T ss_dssp CBEEEEEEHHHHHHHHHH
T ss_pred CEEEEEEEHHHHHHHHHH
Confidence 999999999999998865
No 60
>4avf_A Inosine-5'-monophosphate dehydrogenase; oxidoreductase; 2.23A {Pseudomonas aeruginosa}
Probab=98.89 E-value=2.1e-10 Score=122.88 Aligned_cols=149 Identities=11% Similarity=0.149 Sum_probs=24.4
Q ss_pred cccCHHHHHHHHHhhccccCCCCCCC-----hhHHHHHhhcccccccccccccccCcceEEEeCCCChHHHHHHHHHHcC
Q 011147 164 ALLRRAELKTLVDMHGNEAGKGGELT-----HDETTIITGALDMTQKTAKDAMTAMSKIFSLDINSRLDEKTMGLIISNG 238 (492)
Q Consensus 164 ~~~s~eEL~~lv~~~~~e~~~~g~L~-----~~E~~iI~~vl~l~~~~V~diMtPr~~v~~l~~~~tl~~e~~~~i~~~~ 238 (492)
..++++++...+...+. -|.+. +++.+++.++ ++++++|++ ++++++.++++. ++++.+.+++
T Consensus 51 ~tVTe~~lA~ala~~GG----iGvI~~~~~~e~~a~~v~~v-----k~~~~~m~~--~~v~v~~~~tv~-ea~~~m~~~~ 118 (490)
T 4avf_A 51 DTVTEARLAIAMAQEGG----IGIIHKNMGIEQQAAEVRKV-----KKHETAIVR--DPVTVTPSTKII-ELLQMAREYG 118 (490)
T ss_dssp TTTCSHHHHHHHHHHTS----EEEECCSSCHHHHHHHHHHH-----HHCCC-----------------------------
T ss_pred hhhCHHHHHHHHHHcCC----CccccCCCCHHHHHHHhhhh-----cccccCccc--CceEeCCCCcHH-HHHHHHHHhC
Confidence 35788999988874321 23343 5667888877 557889984 778999999998 9999999999
Q ss_pred CccceEEeCCCCceEEEEEccchHHHHHHhhccchhhHHhhhccCCCcccccccchhhhhhccccccccccccCCCCCCC
Q 011147 239 HSRVPIYVGTPTNIIGAILGHSHMAVVVKCKNDSKEIAEMEKSKAPMQHDININSNLKQRQGELKGNVQNEQFNAYMNSP 318 (492)
Q Consensus 239 ~SRiPV~~~~~d~IvGiv~~~d~m~~vvk~l~~~~~~~~~~~~~~~v~~v~~~~~~~~~~~~~~~~~~~~~~vp~~~~~~ 318 (492)
|+++||++ .++++|+|+.+|+. ... ..+.+++++ |++......++...
T Consensus 119 ~s~~pVvd--~g~lvGIVt~rDl~-----~~~---------~~~~~V~~v-------------Mtp~~~~vtv~~~~--- 166 (490)
T 4avf_A 119 FSGFPVVE--QGELVGIVTGRDLR-----VKP---------NAGDTVAAI-------------MTPKDKLVTAREGT--- 166 (490)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred CCEEEEEE--CCEEEEEEEhHHhh-----hcc---------ccCCcHHHH-------------hccCCCCEEECCCC---
Confidence 99999998 47999999966632 111 112344444 11000122234433
Q ss_pred CcccchhhhhhhhhhhhhHHHHHHHHhHcCcc-eEEecccCCCCCCCcEEEEechhHHHHHH
Q 011147 319 SVISSDIDIQSSMAKSADLHLCLKKWERQDVK-ISKEELESLPSVDEEVIGIITLEDVMEEL 379 (492)
Q Consensus 319 ~~~~~~l~~~~~~~~~~dl~~~l~~~~~~~~~-~lVv~~~~~pde~g~vvGIITlEDViEeL 379 (492)
++.++++.|++++.+ ++|+ |++|+++|+||++|+++..
T Consensus 167 -----------------~l~ea~~~m~~~~i~~lpVV------De~g~lvGiIT~~Dil~~~ 205 (490)
T 4avf_A 167 -----------------PLEEMKAKLYENRIEKMLVV------DENFYLRGLVTFRDIEKAK 205 (490)
T ss_dssp --------------------------------------------------------------
T ss_pred -----------------cHHHHHHHHHHcCCCEEEEE------cCCCcEEEEEehHHhhhhc
Confidence 355679999999999 9999 8999999999999999976
No 61
>2qrd_G Protein C1556.08C; AMPK, ADP, ATP-binding, kinase, nucleotide-binding, serine/T protein kinase, transferase, CBS domain; HET: ADP ATP; 2.41A {Schizosaccharomyces pombe} PDB: 2qrc_G* 2qr1_G* 2qre_G* 2oox_G* 2ooy_G*
Probab=98.88 E-value=6.4e-09 Score=104.17 Aligned_cols=128 Identities=11% Similarity=0.137 Sum_probs=90.8
Q ss_pred ccccccc---ccccCcceEEEeCCCChHHHHHHHHHHcCCccceEEeCCCCceEEEEEccchHHHHHHhhccchhhHHhh
Q 011147 203 TQKTAKD---AMTAMSKIFSLDINSRLDEKTMGLIISNGHSRVPIYVGTPTNIIGAILGHSHMAVVVKCKNDSKEIAEME 279 (492)
Q Consensus 203 ~~~~V~d---iMtPr~~v~~l~~~~tl~~e~~~~i~~~~~SRiPV~~~~~d~IvGiv~~~d~m~~vvk~l~~~~~~~~~~ 279 (492)
...+|++ +|+ .++.+++.++++. ++++.+.+++++++||+++ .++++|+|+.+|+++.+.+....
T Consensus 180 ~~~~v~~l~~~m~--~~~~~v~~~~~~~-~~~~~m~~~~~~~~~Vvd~-~~~~~Giit~~dl~~~~~~~~~~-------- 247 (334)
T 2qrd_G 180 LRVPLNQMTIGTW--SNLATASMETKVY-DVIKMLAEKNISAVPIVNS-EGTLLNVYESVDVMHLIQDGDYS-------- 247 (334)
T ss_dssp CCCBGGGSSCSBC--SSCCCBCTTSBHH-HHHHHHHHHTCSEEEEECT-TCBEEEEEETHHHHHHHTTSCGG--------
T ss_pred hhCcHHHhCCccc--CCceEECCCCcHH-HHHHHHHHcCCcEEEEEcC-CCcEEEEEEHHHHHHHhhccccc--------
Confidence 4578889 477 4678899999998 9999999999999999974 36899999977765444322100
Q ss_pred hccCCCcccccccchhhhhhcccccc----ccccccCCCCCCCCcccchhhhhhhhhhhhhHHHHHHHHhHcCcc-eEEe
Q 011147 280 KSKAPMQHDININSNLKQRQGELKGN----VQNEQFNAYMNSPSVISSDIDIQSSMAKSADLHLCLKKWERQDVK-ISKE 354 (492)
Q Consensus 280 ~~~~~v~~v~~~~~~~~~~~~~~~~~----~~~~~vp~~~~~~~~~~~~l~~~~~~~~~~dl~~~l~~~~~~~~~-~lVv 354 (492)
..+.++.++ +.+. ..+..++.+. ++.++++.|.+++.+ ++|+
T Consensus 248 ~~~~~v~~~-------------m~~~~~~~~~~~~v~~~~--------------------~l~~~~~~m~~~~~~~l~Vv 294 (334)
T 2qrd_G 248 NLDLSVGEA-------------LLKRPANFDGVHTCRATD--------------------RLDGIFDAIKHSRVHRLFVV 294 (334)
T ss_dssp GGGSBHHHH-------------HTTCCTTCCCCCEECTTC--------------------BHHHHHHHHHHSCCCEEEEE
T ss_pred cccCcHHHH-------------HhcccccCCCCEEECCCC--------------------cHHHHHHHHHHcCCCEEEEE
Confidence 011223222 1100 0111122222 367889999999999 9999
Q ss_pred cccCCCCCCCcEEEEechhHHHHHHcc
Q 011147 355 ELESLPSVDEEVIGIITLEDVMEELLQ 381 (492)
Q Consensus 355 ~~~~~pde~g~vvGIITlEDViEeLlg 381 (492)
|++|+++||||..|+++.+.+
T Consensus 295 ------d~~g~l~Giit~~dil~~~~~ 315 (334)
T 2qrd_G 295 ------DENLKLEGILSLADILNYIIY 315 (334)
T ss_dssp ------CTTCBEEEEEEHHHHHHHHHS
T ss_pred ------CCCCeEEEEEeHHHHHHHHHh
Confidence 788999999999999999987
No 62
>3l2b_A Probable manganase-dependent inorganic pyrophosphatase; family II, CBS domain, bateman domain, AP4A, diadenosine polyphosphate, DRTGG; HET: B4P; 2.27A {Clostridium perfringens} PDB: 3l31_A*
Probab=98.87 E-value=5.2e-09 Score=100.84 Aligned_cols=60 Identities=15% Similarity=0.233 Sum_probs=51.3
Q ss_pred ccccccccccCcceEEEeCCCChHHHHHHHHHHcCCccceEEeCCCCceEEEEEccchHHHHHH
Q 011147 204 QKTAKDAMTAMSKIFSLDINSRLDEKTMGLIISNGHSRVPIYVGTPTNIIGAILGHSHMAVVVK 267 (492)
Q Consensus 204 ~~~V~diMtPr~~v~~l~~~~tl~~e~~~~i~~~~~SRiPV~~~~~d~IvGiv~~~d~m~~vvk 267 (492)
..+|+|+|++ ++.+++.++++. ++++.+.+++++++||+++ .++++|+++.+|+++.+..
T Consensus 6 ~~~v~~im~~--~~~~v~~~~~~~-~a~~~m~~~~~~~lpVvd~-~~~l~Giit~~di~~~~~~ 65 (245)
T 3l2b_A 6 KLKVEDLEMD--KIAPLAPEVSLK-MAWNIMRDKNLKSIPVADG-NNHLLGMLSTSNITATYMD 65 (245)
T ss_dssp CCBGGGSCCB--CCCCBCTTCBHH-HHHHHHHHTTCSEEEEECT-TCBEEEEEEHHHHHHHHHC
T ss_pred cCcHHHhcCC--CCcEECCCCcHH-HHHHHHHHcCCCEEEEEcC-CCEEEEEEEHHHHHHHHHH
Confidence 4689999985 678899999998 9999999999999999975 3789999998877666543
No 63
>2yzq_A Putative uncharacterized protein PH1780; sheet/helix/sheet/sheet/helix, structural genomics, unknown function, NPPSFA; HET: SAM; 1.63A {Pyrococcus horikoshii} SCOP: d.37.1.1 d.37.1.1
Probab=98.87 E-value=4.2e-09 Score=102.53 Aligned_cols=117 Identities=13% Similarity=0.159 Sum_probs=73.1
Q ss_pred cccccccccCcceEEEeCCCChHHHHHHHHHHcCCccceEEeCCCCceEEEEEccchHHHHHHhhccchhhHHhhhccCC
Q 011147 205 KTAKDAMTAMSKIFSLDINSRLDEKTMGLIISNGHSRVPIYVGTPTNIIGAILGHSHMAVVVKCKNDSKEIAEMEKSKAP 284 (492)
Q Consensus 205 ~~V~diMtPr~~v~~l~~~~tl~~e~~~~i~~~~~SRiPV~~~~~d~IvGiv~~~d~m~~vvk~l~~~~~~~~~~~~~~~ 284 (492)
++|+|+|++ ++++++.++++. ++++.+.+++++++||+++ .++++|+++.+|++... . +.+
T Consensus 1 m~v~~im~~--~~~~v~~~~~~~-~a~~~~~~~~~~~~pV~d~-~~~~~Giv~~~dl~~~~----~-----------~~~ 61 (282)
T 2yzq_A 1 MRVKTIMTQ--NPVTITLPATRN-YALELFKKYKVRSFPVVNK-EGKLVGIISVKRILVNP----D-----------EEQ 61 (282)
T ss_dssp CBHHHHSEE--SCCCEESSCC-------------CCEEEEECT-TCCEEEEEESSCC-----------------------
T ss_pred CchHHhccC--CCeEECCCCcHH-HHHHHHHHcCCCeEEEEcC-CCcEEEEEEHHHHHhhh----c-----------cCC
Confidence 368999994 778899999998 9999999999999999975 47899999987764321 1 122
Q ss_pred CcccccccchhhhhhccccccccccccCCCCCCCCcccchhhhhhhhhhhhhHHHHHHHHhHcCcc-eEEecccCCCCCC
Q 011147 285 MQHDININSNLKQRQGELKGNVQNEQFNAYMNSPSVISSDIDIQSSMAKSADLHLCLKKWERQDVK-ISKEELESLPSVD 363 (492)
Q Consensus 285 v~~v~~~~~~~~~~~~~~~~~~~~~~vp~~~~~~~~~~~~l~~~~~~~~~~dl~~~l~~~~~~~~~-~lVv~~~~~pde~ 363 (492)
++++ +.+. ...++.+. ++.++++.|.+.+.+ ++|+ |++
T Consensus 62 v~~~-------------m~~~--~~~v~~~~--------------------~l~~a~~~m~~~~~~~~~Vv------d~~ 100 (282)
T 2yzq_A 62 LAML-------------VKRD--VPVVKEND--------------------TLKKAAKLMLEYDYRRVVVV------DSK 100 (282)
T ss_dssp --CC-------------CBSC--CCEEETTS--------------------BHHHHHHHHHHHTCSEEEEE------CTT
T ss_pred HHHH-------------cCCC--CcEECCCC--------------------cHHHHHHHHHHcCCCEEEEE------cCC
Confidence 3333 1111 11123222 366789999999988 9999 788
Q ss_pred CcEEEEechhHHHH-HHcc
Q 011147 364 EEVIGIITLEDVME-ELLQ 381 (492)
Q Consensus 364 g~vvGIITlEDViE-eLlg 381 (492)
|+++|+||.+|+++ .+.+
T Consensus 101 ~~~~Giit~~di~~~~~~~ 119 (282)
T 2yzq_A 101 GKPVGILTVGDIIRRYFAK 119 (282)
T ss_dssp SCEEEEEEHHHHHHHTTTT
T ss_pred CEEEEEEEHHHHHHHHHhc
Confidence 99999999999999 6654
No 64
>2yzq_A Putative uncharacterized protein PH1780; sheet/helix/sheet/sheet/helix, structural genomics, unknown function, NPPSFA; HET: SAM; 1.63A {Pyrococcus horikoshii} SCOP: d.37.1.1 d.37.1.1
Probab=98.80 E-value=2.2e-08 Score=97.46 Aligned_cols=134 Identities=9% Similarity=0.143 Sum_probs=87.2
Q ss_pred cccccccccccCcceEEEeCCCChHHHHHHHHHHcCCccceEEeCCCCceEEEEEccchH------HHHHHh---hccc-
Q 011147 203 TQKTAKDAMTAMSKIFSLDINSRLDEKTMGLIISNGHSRVPIYVGTPTNIIGAILGHSHM------AVVVKC---KNDS- 272 (492)
Q Consensus 203 ~~~~V~diMtPr~~v~~l~~~~tl~~e~~~~i~~~~~SRiPV~~~~~d~IvGiv~~~d~m------~~vvk~---l~~~- 272 (492)
.+.+++++|++ ++.+++.++++. ++++.+.+++++++||.++ .++++|++..+|++ +.+-+. +...
T Consensus 124 ~~~~v~~~m~~--~~~~v~~~~~l~-~~~~~~~~~~~~~l~Vvd~-~~~~~Giit~~dl~~~~~~~~~~~~~~~~~~~~~ 199 (282)
T 2yzq_A 124 KGVEIEPYYQR--YVSIVWEGTPLK-AALKALLLSNSMALPVVDS-EGNLVGIVDETDLLRDSEIVRIMKSTELAASSEE 199 (282)
T ss_dssp GGCBSTTTSBS--CCCCEETTSBHH-HHHHHHHTCSSSEEEEECT-TSCEEEEEEGGGGGGCGGGCC-------------
T ss_pred ccCcHHHHhCC--CCEEECCCCCHH-HHHHHHHHcCCcEEEEEcC-CCeEEEEEEHHHHhhhhhhhhhhccchhhhhhhh
Confidence 46789999974 677899999998 9999999999999999974 36899999988765 211000 0000
Q ss_pred ----hhhHH-------hhhccCCCcccccccchhhhhhccccccccccccCCCCCCCCcccchhhhhhhhhhhhhHHHHH
Q 011147 273 ----KEIAE-------MEKSKAPMQHDININSNLKQRQGELKGNVQNEQFNAYMNSPSVISSDIDIQSSMAKSADLHLCL 341 (492)
Q Consensus 273 ----~~~~~-------~~~~~~~v~~v~~~~~~~~~~~~~~~~~~~~~~vp~~~~~~~~~~~~l~~~~~~~~~~dl~~~l 341 (492)
..... ....+.+++++ +.+. +..+..+ .++.+|+
T Consensus 200 ~~~~~~~~~~~~~~~~~~~~~~~v~~i-------------m~~~--~~~v~~~--------------------~~l~~a~ 244 (282)
T 2yzq_A 200 EWILESHPTLLFEKFELQLPNKPVAEI-------------MTRD--VIVATPH--------------------MTVHEVA 244 (282)
T ss_dssp -------------------CCCBGGGT-------------CBSS--CCCBCTT--------------------SBHHHHH
T ss_pred hhhcccchHHHHhHhhhhhccCCHHHh-------------cCCC--CceeCCC--------------------CCHHHHH
Confidence 00000 00001112111 1111 1111221 2367889
Q ss_pred HHHhHcCcc-eEEecccCCCCCCCcEEEEechhHHHHHHcc
Q 011147 342 KKWERQDVK-ISKEELESLPSVDEEVIGIITLEDVMEELLQ 381 (492)
Q Consensus 342 ~~~~~~~~~-~lVv~~~~~pde~g~vvGIITlEDViEeLlg 381 (492)
+.|.+++.+ ++|+ |++|+++||||..|+++.+.+
T Consensus 245 ~~m~~~~~~~lpVv------d~~~~lvGiit~~Dil~~~~~ 279 (282)
T 2yzq_A 245 LKMAKYSIEQLPVI------RGEGDLIGLIRDFDLLKVLVK 279 (282)
T ss_dssp HHHHHHTCSEEEEE------ETTTEEEEEEEHHHHGGGGCC
T ss_pred HHHHHcCcceeEEE------CCCCCEEEEEeHHHHHHHHHh
Confidence 999999999 9999 677899999999999998765
No 65
>2v8q_E 5'-AMP-activated protein kinase subunit gamma-1; phosphorylation, nucleotide-binding, serine/threonine-protei kinase, magnesium, CBS domain; HET: AMP; 2.10A {Rattus norvegicus} SCOP: d.37.1.1 d.37.1.1 PDB: 2v92_E* 2v9j_E* 2y8l_E* 2y8q_E* 2y94_E* 2ya3_E*
Probab=98.69 E-value=3.4e-08 Score=98.87 Aligned_cols=132 Identities=11% Similarity=0.179 Sum_probs=87.7
Q ss_pred ccccccc--cccCcceEEEeCCCChHHHHHHHHHHcCCccceEEeCCCCceEEEEEccchHHHHHHhhccchhhHHhhhc
Q 011147 204 QKTAKDA--MTAMSKIFSLDINSRLDEKTMGLIISNGHSRVPIYVGTPTNIIGAILGHSHMAVVVKCKNDSKEIAEMEKS 281 (492)
Q Consensus 204 ~~~V~di--MtPr~~v~~l~~~~tl~~e~~~~i~~~~~SRiPV~~~~~d~IvGiv~~~d~m~~vvk~l~~~~~~~~~~~~ 281 (492)
..+++++ |+ ..++.+++.++++. ++++.+.+++++++||+++ .++++|+|+.+|+++.+.+.... ..
T Consensus 189 ~~~v~~~~v~~-~~~~~~v~~~~~l~-~~~~~m~~~~~~~~~Vvd~-~~~l~Giit~~dl~~~~~~~~~~--------~~ 257 (330)
T 2v8q_E 189 SKSLEELQIGT-YANIAMVRTTTPVY-VALGIFVQHRVSALPVVDE-KGRVVDIYSKFDVINLAAEKTYN--------NL 257 (330)
T ss_dssp GSBHHHHTCSB-CSSCCCEETTCBHH-HHHHHHHHHCCSEEEEECT-TSBEEEEEEGGGTGGGGGSSCCC--------CC
T ss_pred cCCHHHhcccC-cCCceEECCCCCHH-HHHHHHHHcCCCeEEEECC-CCcEEEEEEHHHHHHHHhccccc--------cc
Confidence 3566676 54 25778899999998 9999999999999999974 37899999977754322111000 00
Q ss_pred cCCCcccccccchhhhhhccccccccccccCCCCCCCCcccchhhhhhhhhhhhhHHHHHHHHhHcCcc-eEEecccCCC
Q 011147 282 KAPMQHDININSNLKQRQGELKGNVQNEQFNAYMNSPSVISSDIDIQSSMAKSADLHLCLKKWERQDVK-ISKEELESLP 360 (492)
Q Consensus 282 ~~~v~~v~~~~~~~~~~~~~~~~~~~~~~vp~~~~~~~~~~~~l~~~~~~~~~~dl~~~l~~~~~~~~~-~lVv~~~~~p 360 (492)
+.++.+++.. ...+.+ ..+.++.+. ++.++++.|.+.+.+ ++|+
T Consensus 258 ~~~v~~~~~~-------~~~~~~--~~~~v~~~~--------------------~l~~a~~~m~~~~~~~l~Vv------ 302 (330)
T 2v8q_E 258 DVSVTKALQH-------RSHYFE--GVLKCYLHE--------------------TLEAIINRLVEAEVHRLVVV------ 302 (330)
T ss_dssp SSBHHHHGGG-------CCSCCC--SCCEECTTS--------------------BHHHHHHHHHHHTCSEEEEE------
T ss_pred cCcHHHHHhc-------cccccC--CCeEECCCC--------------------cHHHHHHHHHHCCCcEEEEE------
Confidence 1122222100 000001 111123322 367789999999999 9999
Q ss_pred CCCCcEEEEechhHHHHHHcc
Q 011147 361 SVDEEVIGIITLEDVMEELLQ 381 (492)
Q Consensus 361 de~g~vvGIITlEDViEeLlg 381 (492)
|++|+++||||..|+++.+..
T Consensus 303 d~~g~l~Giit~~Dil~~~~~ 323 (330)
T 2v8q_E 303 DEHDVVKGIVSLSDILQALVL 323 (330)
T ss_dssp CTTSBEEEEEEHHHHHHHHHS
T ss_pred cCCCcEEEEEeHHHHHHHHHh
Confidence 788999999999999999975
No 66
>1vrd_A Inosine-5'-monophosphate dehydrogenase; TM1347, structural G joint center for structural genomics, JCSG, protein structu initiative, PSI; 2.18A {Thermotoga maritima} SCOP: c.1.5.1
Probab=98.43 E-value=3.8e-08 Score=105.21 Aligned_cols=132 Identities=10% Similarity=0.180 Sum_probs=13.8
Q ss_pred CCh-hHHHHHhhcccccccccccccccCcceEEEeCCCChHHHHHHHHHHcCCccceEEeCCCCceEEEEEccchHHHHH
Q 011147 188 LTH-DETTIITGALDMTQKTAKDAMTAMSKIFSLDINSRLDEKTMGLIISNGHSRVPIYVGTPTNIIGAILGHSHMAVVV 266 (492)
Q Consensus 188 L~~-~E~~iI~~vl~l~~~~V~diMtPr~~v~~l~~~~tl~~e~~~~i~~~~~SRiPV~~~~~d~IvGiv~~~d~m~~vv 266 (492)
++. +.++.+..++ +++++|++ ++++++.++++. ++++.+.+++++++||+++ .++++|+|+.+|+..
T Consensus 82 ~~~e~~~~~v~~v~-----~~~~iM~~--~~~~v~~~~tv~-ea~~~m~~~~~~~~pVvd~-~~~lvGivt~~Dl~~--- 149 (494)
T 1vrd_A 82 LTPDEQARQVSIVK-----KTENGIIY--DPITVTPDMTVK-EAIDLMAEYKIGGLPVVDE-EGRLVGLLTNRDVRF--- 149 (494)
T ss_dssp SCHHHHHHHHHHHH-----TC-----------------------------------------------------------
T ss_pred CChHHHHHHHHhhh-----hHhhcCcc--CCeEECCCCCHH-HHHHHHHHcCceEEEEEcC-CCEEEEEEEHHHHHh---
Confidence 344 3345566554 46788986 788999999998 9999999999999999975 368999999766432
Q ss_pred HhhccchhhHHhhhccCCCcccccccchhhhhhccccccccccccCCCCCCCCcccchhhhhhhhhhhhhHHHHHHHHhH
Q 011147 267 KCKNDSKEIAEMEKSKAPMQHDININSNLKQRQGELKGNVQNEQFNAYMNSPSVISSDIDIQSSMAKSADLHLCLKKWER 346 (492)
Q Consensus 267 k~l~~~~~~~~~~~~~~~v~~v~~~~~~~~~~~~~~~~~~~~~~vp~~~~~~~~~~~~l~~~~~~~~~~dl~~~l~~~~~ 346 (492)
. .+ .+.+++++ |.+...+..++.+. ++.++++.|++
T Consensus 150 -~-~~---------~~~~v~~i-------------m~~~~~~~~v~~~~--------------------~l~ea~~~m~~ 185 (494)
T 1vrd_A 150 -E-KN---------LSKKIKDL-------------MTPREKLIVAPPDI--------------------SLEKAKEILHQ 185 (494)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred -h-cC---------CCCcHHHH-------------hCCCCCCeEECCCC--------------------CHHHHHHHHHH
Confidence 1 10 12234444 11100111122222 35567899999
Q ss_pred cCcc-eEEecccCCCCCCCcEEEEechhHHHHHHcc
Q 011147 347 QDVK-ISKEELESLPSVDEEVIGIITLEDVMEELLQ 381 (492)
Q Consensus 347 ~~~~-~lVv~~~~~pde~g~vvGIITlEDViEeLlg 381 (492)
.+.+ ++|+ |++|+++||||..|+++.+..
T Consensus 186 ~~~~~lpVV------d~~g~lvGiIt~~Dll~~~~~ 215 (494)
T 1vrd_A 186 HRIEKLPLV------SKDNKLVGLITIKDIMSVIEH 215 (494)
T ss_dssp -----------------------------CHHHHTC
T ss_pred cCCcEEEEE------cCCCeEEEEEEHHHHHhhhcc
Confidence 9998 9999 789999999999999999976
No 67
>1jcn_A Inosine monophosphate dehydrogenase I; IMPD, IMPDH, guanine nucleotide synthesis, oxidoreductase; HET: CPR; 2.50A {Homo sapiens} SCOP: c.1.5.1 d.37.1.1 PDB: 1jr1_A* 1nf7_A* 1b3o_A* 1nfb_A*
Probab=98.08 E-value=2.4e-07 Score=99.53 Aligned_cols=123 Identities=11% Similarity=0.133 Sum_probs=58.0
Q ss_pred cccccccccCcceEEEeCCCChHHHHHHHHHHcCCccceEEeCC--CCceEEEEEccchHHHHHHhhccchhhHHhhhcc
Q 011147 205 KTAKDAMTAMSKIFSLDINSRLDEKTMGLIISNGHSRVPIYVGT--PTNIIGAILGHSHMAVVVKCKNDSKEIAEMEKSK 282 (492)
Q Consensus 205 ~~V~diMtPr~~v~~l~~~~tl~~e~~~~i~~~~~SRiPV~~~~--~d~IvGiv~~~d~m~~vvk~l~~~~~~~~~~~~~ 282 (492)
++++++|++ ++++++.++++. ++++.+.+++++++||++++ .++++|+|+.+|+... ... ..+
T Consensus 108 ~~~~~im~~--~~~~v~~~~tv~-ea~~~m~~~~~~~~pVvd~~~~~~~lvGiVt~~Dl~~~-----~~~-------~~~ 172 (514)
T 1jcn_A 108 KNFEQGFIT--DPVVLSPSHTVG-DVLEAKMRHGFSGIPITETGTMGSKLVGIVTSRDIDFL-----AEK-------DHT 172 (514)
T ss_dssp HTCCTTSCS--SCCCCCC------------------CEESCC--------CCEECTTTTC--------------------
T ss_pred hhhhhcccc--CCEEECCCCCHH-HHHHHHHhcCCCEEEEEeCCCcCCEEEEEEEHHHHHhh-----hhc-------cCC
Confidence 468899985 567899999998 99999999999999999753 4789999997765321 000 012
Q ss_pred CCCcccccccchhhhhhccccccccccccCCCCCCCCcccchhhhhhhhhhhhhHHHHHHHHhHcCcc-eEEecccCCCC
Q 011147 283 APMQHDININSNLKQRQGELKGNVQNEQFNAYMNSPSVISSDIDIQSSMAKSADLHLCLKKWERQDVK-ISKEELESLPS 361 (492)
Q Consensus 283 ~~v~~v~~~~~~~~~~~~~~~~~~~~~~vp~~~~~~~~~~~~l~~~~~~~~~~dl~~~l~~~~~~~~~-~lVv~~~~~pd 361 (492)
.+++++ +.+......++...+ +.++++.|.+.+.+ ++|+ |
T Consensus 173 ~~v~~v-------------m~~~~~~~tv~~~~~--------------------l~ea~~~m~~~~~~~lpVV------d 213 (514)
T 1jcn_A 173 TLLSEV-------------MTPRIELVVAPAGVT--------------------LKEANEILQRSKKGKLPIV------N 213 (514)
T ss_dssp ---------------------CCBCCCCEETTCC--------------------STTTTTHHHHHTCSCCCEE------S
T ss_pred CCHHHH-------------hCCCCCCeEECCCCC--------------------HHHHHHHHHHcCCCcccEE------C
Confidence 234433 111001111233333 33457889999988 9999 7
Q ss_pred CCCcEEEEechhHHHHHHcc
Q 011147 362 VDEEVIGIITLEDVMEELLQ 381 (492)
Q Consensus 362 e~g~vvGIITlEDViEeLlg 381 (492)
++|+++|+||..|+++.+..
T Consensus 214 ~~g~lvGiIt~~Dll~~~~~ 233 (514)
T 1jcn_A 214 DCDELVAIIARTDLKKNRDY 233 (514)
T ss_dssp SSSCCC----CCCCSSCCCC
T ss_pred CCCeEEEEEEHHHHHHHhhC
Confidence 89999999999999887653
No 68
>4af0_A Inosine-5'-monophosphate dehydrogenase; oxidoreductase, GTP biosynthesis, drug resistance; HET: MOA IMP; 2.20A {Cryptococcus neoformans} PDB: 4af0_B*
Probab=98.03 E-value=8.9e-07 Score=94.59 Aligned_cols=125 Identities=9% Similarity=0.220 Sum_probs=8.3
Q ss_pred hHHHHHhhcccccccccccccccCcceEEEeCCCChHHHHHHHHHHcCCccceEEeCC--CCceEEEEEccchHHHHHHh
Q 011147 191 DETTIITGALDMTQKTAKDAMTAMSKIFSLDINSRLDEKTMGLIISNGHSRVPIYVGT--PTNIIGAILGHSHMAVVVKC 268 (492)
Q Consensus 191 ~E~~iI~~vl~l~~~~V~diMtPr~~v~~l~~~~tl~~e~~~~i~~~~~SRiPV~~~~--~d~IvGiv~~~d~m~~vvk~ 268 (492)
++.++++.+=.++. .|+ .+.+++.+++++. |+++++.+++||.+||.++. .+.++|||+.+|+ +.
T Consensus 129 ~Qa~~V~~VKr~e~-----g~i--~dPvtl~P~~Tv~-da~~l~~~~~isgvpVvd~g~~~~kLvGIvT~RD~-----rf 195 (556)
T 4af0_A 129 EQAAMVRRVKKYEN-----GFI--TDPLCLGPDATVG-DVLEIKAKFGFCGVPITETGEPDSKLLGIVTGRDV-----QF 195 (556)
T ss_dssp HHHHHHHHHHHCCC------------------------------------------------------------------
T ss_pred HHHHHHHHHHhccc-----Ccc--CCCeEcCCCCCHH-HHHHHHHHhCCCccccccccCcCCEEEEEEecccc-----cc
Confidence 45677777754443 454 3567899999998 99999999999999999742 3579999997663 21
Q ss_pred hccchhhHHhhhccCCCcccccccchhhhhhccccccccccccCCCCCCCCcccchhhhhhhhhhhhhHHHHHHHHhHcC
Q 011147 269 KNDSKEIAEMEKSKAPMQHDININSNLKQRQGELKGNVQNEQFNAYMNSPSVISSDIDIQSSMAKSADLHLCLKKWERQD 348 (492)
Q Consensus 269 l~~~~~~~~~~~~~~~v~~v~~~~~~~~~~~~~~~~~~~~~~vp~~~~~~~~~~~~l~~~~~~~~~~dl~~~l~~~~~~~ 348 (492)
. + .+.+++++ |+.. .+.++... ++++|.+.|++++
T Consensus 196 ~-d---------~~~~V~ev-------------MT~~--lvt~~~~~--------------------~leeA~~iL~~~k 230 (556)
T 4af0_A 196 Q-D---------AETPIKSV-------------MTTE--VVTGSSPI--------------------TLEKANSLLRETK 230 (556)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred c-c---------cceEhhhh-------------cccc--eEEecCCC--------------------CHHHHHHHHHHcc
Confidence 1 1 13455555 2211 11123322 3556789999999
Q ss_pred cc-eEEecccCCCCCCCcEEEEechhHHHHHH
Q 011147 349 VK-ISKEELESLPSVDEEVIGIITLEDVMEEL 379 (492)
Q Consensus 349 ~~-~lVv~~~~~pde~g~vvGIITlEDViEeL 379 (492)
.. ++|| |++|+++|+||..|+.+.-
T Consensus 231 ieklpVV------d~~g~LvGlIT~kDi~k~~ 256 (556)
T 4af0_A 231 KGKLPIV------DSNGHLVSLVARSDLLKNQ 256 (556)
T ss_dssp --------------------------------
T ss_pred ccceeEE------ccCCcEEEEEEechhhhhh
Confidence 99 9999 8999999999999998654
No 69
>3l2b_A Probable manganase-dependent inorganic pyrophosphatase; family II, CBS domain, bateman domain, AP4A, diadenosine polyphosphate, DRTGG; HET: B4P; 2.27A {Clostridium perfringens} PDB: 3l31_A*
Probab=97.83 E-value=1.1e-05 Score=77.50 Aligned_cols=58 Identities=10% Similarity=0.196 Sum_probs=49.2
Q ss_pred cccccccccccCcceEEEeCCCChHHHHHHHHHHcCCccceEEeCCCCceEEEEEccchHH
Q 011147 203 TQKTAKDAMTAMSKIFSLDINSRLDEKTMGLIISNGHSRVPIYVGTPTNIIGAILGHSHMA 263 (492)
Q Consensus 203 ~~~~V~diMtPr~~v~~l~~~~tl~~e~~~~i~~~~~SRiPV~~~~~d~IvGiv~~~d~m~ 263 (492)
...+|+|+|+| .++.+++.++++. ++++.+.+++++++||++++ ++++|+|+.+|+++
T Consensus 183 ~~~~v~~im~~-~~~~~~~~~~~~~-~~~~~m~~~~~~~~pVvd~~-~~~~Giit~~dll~ 240 (245)
T 3l2b_A 183 QSLPVDYVMTK-DNLVAVSTDDLVE-DVKVTMSETRYSNYPVIDEN-NKVVGSIARFHLIS 240 (245)
T ss_dssp GGSBHHHHSBC-TTCCCEETTSBHH-HHHHHHHHHCCSEEEEECTT-CBEEEEEECC----
T ss_pred cCCceeeEecC-CccEEECCCCcHH-HHHHHHHhcCCceEEEEcCC-CeEEEEEEHHHhhc
Confidence 46789999998 7889999999998 99999999999999999754 78999999887643
No 70
>3fv6_A YQZB protein; CBS domain dimer, metabolism regulator, central glycolytic G regulator, transcription; 1.95A {Bacillus subtilis} PDB: 3fwr_A* 3fws_A*
Probab=97.69 E-value=4.1e-05 Score=68.28 Aligned_cols=67 Identities=16% Similarity=0.211 Sum_probs=56.1
Q ss_pred cccccccccccccCcceEEEeCCCChHHHHHHHHHHcCCccceEEeCCCC--ceEEEEEccchHHHHHHh
Q 011147 201 DMTQKTAKDAMTAMSKIFSLDINSRLDEKTMGLIISNGHSRVPIYVGTPT--NIIGAILGHSHMAVVVKC 268 (492)
Q Consensus 201 ~l~~~~V~diMtPr~~v~~l~~~~tl~~e~~~~i~~~~~SRiPV~~~~~d--~IvGiv~~~d~m~~vvk~ 268 (492)
...+.+|+++|+++.++++++.++++. ++++.+.+++++++||++++.+ +++|+|+.+|+++.+.+.
T Consensus 77 ~~~~~~v~~~m~~~~~~~~v~~~~~l~-~a~~~m~~~~~~~lpVvd~~g~~~~~vGiit~~dil~~l~~~ 145 (159)
T 3fv6_A 77 ELTSVPVHIIMTRMPNITVCRREDYVM-DIAKHLIEKQIDALPVIKDTDKGFEVIGRVTKTNMTKILVSL 145 (159)
T ss_dssp CTTTCBGGGTSEETTSCCCBCTTSBHH-HHHHHHHHHTCSEEEEEEECSSSEEEEEEEEHHHHHHHHHHH
T ss_pred cccCcCHHHHHcCCCCcEEECCCCCHH-HHHHHHHHcCCcEEEEEeCCCcceeEEEEEEHHHHHHHHHHH
Confidence 356789999999877888999999998 9999999999999999985322 899999977776665544
No 71
>3jtf_A Magnesium and cobalt efflux protein; CBS domain, CORC, AMP, structural genomics, PSI-2, protein S initiative; HET: MSE AMP; 2.00A {Bordetella parapertussis}
Probab=97.49 E-value=0.00016 Score=62.01 Aligned_cols=60 Identities=8% Similarity=0.034 Sum_probs=50.3
Q ss_pred cccccccccccCcceEEEeCCCChHHHHHHHHHHcCCccceEEeCCCCceEEEEEccchHHHHHH
Q 011147 203 TQKTAKDAMTAMSKIFSLDINSRLDEKTMGLIISNGHSRVPIYVGTPTNIIGAILGHSHMAVVVK 267 (492)
Q Consensus 203 ~~~~V~diMtPr~~v~~l~~~~tl~~e~~~~i~~~~~SRiPV~~~~~d~IvGiv~~~d~m~~vvk 267 (492)
.+.+++++|.| +.+++.++++. ++++.+.+++..++||+++ .++++|+|+.+|+++.++.
T Consensus 67 ~~~~v~~~m~~---~~~v~~~~~l~-~~~~~m~~~~~~~~pVvd~-~g~~~Giit~~Dil~~l~g 126 (129)
T 3jtf_A 67 PALDIRSLVRP---AVFIPEVKRLN-VLLREFRASRNHLAIVIDE-HGGISGLVTMEDVLEQIVG 126 (129)
T ss_dssp TTSCGGGGCBC---CCEEETTCBHH-HHHHHHHTSSCCEEEEECC--CCEEEEEEHHHHHHHHHH
T ss_pred CCcCHHHHhCC---CeEeCCCCcHH-HHHHHHHhcCCeEEEEEeC-CCCEEEEEEHHHHHHHHhC
Confidence 46789999974 67899999998 9999999999999999974 4789999997777666554
No 72
>1pbj_A Hypothetical protein; structural genomics, domain, PSI, protein structure initiative; 1.40A {Methanothermobacter thermautotrophicusdelta H} SCOP: d.37.1.1
Probab=97.48 E-value=0.00011 Score=62.08 Aligned_cols=58 Identities=14% Similarity=0.240 Sum_probs=49.9
Q ss_pred cccccccccccccCcceEEEeCCCChHHHHHHHHHHcCCccceEEeCCCCceEEEEEccchHH
Q 011147 201 DMTQKTAKDAMTAMSKIFSLDINSRLDEKTMGLIISNGHSRVPIYVGTPTNIIGAILGHSHMA 263 (492)
Q Consensus 201 ~l~~~~V~diMtPr~~v~~l~~~~tl~~e~~~~i~~~~~SRiPV~~~~~d~IvGiv~~~d~m~ 263 (492)
.+.+.+++++|++ ++.+++.++++. ++++.+.+++++++||+++ ++++|+|+.+|+++
T Consensus 61 ~~~~~~v~~~m~~--~~~~v~~~~~l~-~~~~~~~~~~~~~l~Vvd~--~~~~Gvit~~dl~~ 118 (125)
T 1pbj_A 61 DLAEVKVWEVMER--DLVTISPRATIK-EAAEKMVKNVVWRLLVEED--DEIIGVISATDILR 118 (125)
T ss_dssp CTTTSBHHHHCBC--GGGEECTTSCHH-HHHHHHHHHTCSEEEEEET--TEEEEEEEHHHHHH
T ss_pred cccccCHHHHcCC--CCeEECCCCCHH-HHHHHHHhcCCcEEEEEEC--CEEEEEEEHHHHHH
Confidence 3567899999986 678899999998 9999999999999999986 89999999665443
No 73
>3lhh_A CBS domain protein; structural genomics, PSI-2, protein structure initiative, midwest center for structural genomics, MCSG, cell membrane; HET: MSE AMP; 2.10A {Shewanella oneidensis}
Probab=97.47 E-value=0.00022 Score=64.55 Aligned_cols=63 Identities=8% Similarity=-0.074 Sum_probs=53.0
Q ss_pred cccccccccccCcceEEEeCCCChHHHHHHHHHHcCCccceEEeCCCCceEEEEEccchHHHHHHhhc
Q 011147 203 TQKTAKDAMTAMSKIFSLDINSRLDEKTMGLIISNGHSRVPIYVGTPTNIIGAILGHSHMAVVVKCKN 270 (492)
Q Consensus 203 ~~~~V~diMtPr~~v~~l~~~~tl~~e~~~~i~~~~~SRiPV~~~~~d~IvGiv~~~d~m~~vvk~l~ 270 (492)
.+.+|+++| .++.+++.++++. ++++.+.+++..++||+++ .++++|+|+.+|+++.++..+.
T Consensus 105 ~~~~v~~im---~~~~~v~~~~~l~-~a~~~m~~~~~~~~pVvd~-~g~lvGiit~~Dil~~l~~~~~ 167 (172)
T 3lhh_A 105 ERLELVDLV---KNCNFVPNSLSGM-ELLEHFRTTGSQMVFVVDE-YGDLKGLVTLQDMMDALTGEFF 167 (172)
T ss_dssp CCCCGGGGC---BCCEEEETTCCHH-HHHHHHHHHTCSEEEEECT-TSCEEEEEEHHHHHHHHHTTCC
T ss_pred CcccHHHHh---cCCeEeCCCCCHH-HHHHHHHHcCCeEEEEEeC-CCCEEEEeeHHHHHHHHhCCCc
Confidence 367899999 3678899999998 9999999999999999974 4789999998887777665543
No 74
>2rc3_A CBS domain; in SITU proteolysis, BR, structural genomics, PSI-2, protein structure initiative; HET: NAD; 1.60A {Nitrosomonas europaea atcc 19718} SCOP: d.37.1.1
Probab=97.46 E-value=0.00014 Score=62.49 Aligned_cols=59 Identities=19% Similarity=0.280 Sum_probs=50.5
Q ss_pred ccccccccccccCcceEEEeCCCChHHHHHHHHHHcCCccceEEeCCCCceEEEEEccchHHHH
Q 011147 202 MTQKTAKDAMTAMSKIFSLDINSRLDEKTMGLIISNGHSRVPIYVGTPTNIIGAILGHSHMAVV 265 (492)
Q Consensus 202 l~~~~V~diMtPr~~v~~l~~~~tl~~e~~~~i~~~~~SRiPV~~~~~d~IvGiv~~~d~m~~v 265 (492)
..+.+++++|++ ++.+++.++++. ++++.+.+++++++||++ + ++++|+|+.+|+++.+
T Consensus 71 ~~~~~v~~~m~~--~~~~v~~~~~l~-~~~~~m~~~~~~~lpVvd-~-g~~~Giit~~dll~~~ 129 (135)
T 2rc3_A 71 VKDTQVKEIMTR--QVAYVDLNNTNE-DCMALITEMRVRHLPVLD-D-GKVIGLLSIGDLVKDA 129 (135)
T ss_dssp GGGSBGGGTSBC--SCCCBCTTCBHH-HHHHHHHHHTCSEEEEEE-T-TEEEEEEEHHHHHHHH
T ss_pred cccCCHHHhccC--CCeEECCCCcHH-HHHHHHHHhCCCEEEEEe-C-CEEEEEEEHHHHHHHH
Confidence 467899999986 677899999998 999999999999999998 3 7899999966655443
No 75
>4fry_A Putative signal-transduction protein with CBS DOM; CBS domain,ssgcid, structural genomics, niaid; HET: NAD AMP; 2.10A {Burkholderia ambifaria}
Probab=97.45 E-value=0.00011 Score=64.96 Aligned_cols=62 Identities=21% Similarity=0.297 Sum_probs=52.9
Q ss_pred ccccccccccccCcceEEEeCCCChHHHHHHHHHHcCCccceEEeCCCCceEEEEEccchHHHHHHh
Q 011147 202 MTQKTAKDAMTAMSKIFSLDINSRLDEKTMGLIISNGHSRVPIYVGTPTNIIGAILGHSHMAVVVKC 268 (492)
Q Consensus 202 l~~~~V~diMtPr~~v~~l~~~~tl~~e~~~~i~~~~~SRiPV~~~~~d~IvGiv~~~d~m~~vvk~ 268 (492)
..+.+++++|++ ++.+++.++++. ++++.+.+++++++||+++ ++++|+|+.+|+++.+.+.
T Consensus 75 ~~~~~v~~~m~~--~~~~v~~~~~l~-~~~~~m~~~~~~~lpVvd~--g~~~Giit~~dil~~l~~~ 136 (157)
T 4fry_A 75 SKATRVEEIMTA--KVRYVEPSQSTD-ECMALMTEHRMRHLPVLDG--GKLIGLISIGDLVKSVIAD 136 (157)
T ss_dssp SSSCBHHHHSBS--SCCCBCTTSBHH-HHHHHHHHHTCSEEEEEET--TEEEEEEEHHHHHHHHHTT
T ss_pred ccccCHHHHcCC--CCcEECCCCcHH-HHHHHHHHcCCCEEEEEEC--CEEEEEEEHHHHHHHHHHH
Confidence 467899999997 678899999998 9999999999999999983 7999999977766655544
No 76
>3lfr_A Putative metal ION transporter; CBS, AMP, PSI, MCSG, structural genomics, midwest center for structural genomics; HET: AMP; 1.53A {Pseudomonas syringae}
Probab=97.44 E-value=7e-05 Score=65.05 Aligned_cols=60 Identities=10% Similarity=0.051 Sum_probs=49.1
Q ss_pred ccccccccccccCcceEEEeCCCChHHHHHHHHHHcCCccceEEeCCCCceEEEEEccchHHHHH
Q 011147 202 MTQKTAKDAMTAMSKIFSLDINSRLDEKTMGLIISNGHSRVPIYVGTPTNIIGAILGHSHMAVVV 266 (492)
Q Consensus 202 l~~~~V~diMtPr~~v~~l~~~~tl~~e~~~~i~~~~~SRiPV~~~~~d~IvGiv~~~d~m~~vv 266 (492)
..+.+++++|+| +.+++.++++. ++++.+.+++..++||+++ .++++|+|+.+|+++.++
T Consensus 67 ~~~~~v~~~m~~---~~~v~~~~~l~-~~~~~m~~~~~~~~~Vvd~-~g~lvGiit~~Dil~~l~ 126 (136)
T 3lfr_A 67 GDSDDVKKLLRP---ATFVPESKRLN-VLLREFRANHNHMAIVIDE-YGGVAGLVTIEDVLEQIV 126 (136)
T ss_dssp GGGCCGGGTCBC---CCEEETTCBHH-HHHHHHHHHTCCEEEEECT-TSCEEEEEEHHHHHTTC-
T ss_pred CCCcCHHHHcCC---CeEECCCCcHH-HHHHHHHhcCCeEEEEEeC-CCCEEEEEEHHHHHHHHh
Confidence 456789999975 67899999998 9999999999999999974 478999999666544433
No 77
>3kpb_A Uncharacterized protein MJ0100; CBS domain, S-adenosylmethionine, conformational change, unknown function; HET: SAM; 1.60A {Methanocaldococcus jannaschii} SCOP: d.37.1.0 PDB: 3kpd_A* 3kpc_A*
Probab=97.43 E-value=0.00011 Score=61.89 Aligned_cols=56 Identities=16% Similarity=0.221 Sum_probs=47.4
Q ss_pred ccccccccccCcceEEEeCCCChHHHHHHHHHHcCCccceEEeCCCCceEEEEEccchHH
Q 011147 204 QKTAKDAMTAMSKIFSLDINSRLDEKTMGLIISNGHSRVPIYVGTPTNIIGAILGHSHMA 263 (492)
Q Consensus 204 ~~~V~diMtPr~~v~~l~~~~tl~~e~~~~i~~~~~SRiPV~~~~~d~IvGiv~~~d~m~ 263 (492)
..+++++|.+ ++.+++.++++. ++++.+.+++.+++||+++ .++++|+|+.+|+++
T Consensus 61 ~~~v~~~~~~--~~~~v~~~~~l~-~~~~~~~~~~~~~l~Vvd~-~g~~~Givt~~dl~~ 116 (122)
T 3kpb_A 61 KKTIEEIMTR--NVITAHEDEPVD-HVAIKMSKYNISGVPVVDD-YRRVVGIVTSEDISR 116 (122)
T ss_dssp CCBGGGTSBS--SCCCEETTSBHH-HHHHHHHHHTCSEEEEECT-TCBEEEEEEHHHHHH
T ss_pred ccCHHHHhcC--CCeEECCCCCHH-HHHHHHHHhCCCeEEEECC-CCCEEEEEeHHHHHH
Confidence 3489999986 667899999998 9999999999999999975 478999999665543
No 78
>1o50_A CBS domain-containing predicted protein TM0935; CBS-domain PAIR fold, structural genomics, joint center for structural genomics, JCSG; 1.87A {Thermotoga maritima} SCOP: d.37.1.1
Probab=97.41 E-value=0.00013 Score=64.84 Aligned_cols=61 Identities=16% Similarity=0.311 Sum_probs=51.2
Q ss_pred cccccccccccccCcceEEEeCCCChHHHHHHHHHHcCCccceEEeCCCCceEEEEEccchHHHHH
Q 011147 201 DMTQKTAKDAMTAMSKIFSLDINSRLDEKTMGLIISNGHSRVPIYVGTPTNIIGAILGHSHMAVVV 266 (492)
Q Consensus 201 ~l~~~~V~diMtPr~~v~~l~~~~tl~~e~~~~i~~~~~SRiPV~~~~~d~IvGiv~~~d~m~~vv 266 (492)
...+.+++++|++ +.+++.++++. ++++.+.++++.++||+++ .++++|+|+.+|+++.+.
T Consensus 92 ~~~~~~v~~im~~---~~~v~~~~~l~-~a~~~m~~~~~~~lpVvd~-~g~~vGiit~~dll~~l~ 152 (157)
T 1o50_A 92 RLIAKNASEIMLD---PVYVHMDTPLE-EALKLMIDNNIQEMPVVDE-KGEIVGDLNSLEILLALW 152 (157)
T ss_dssp CCSSCBHHHHCBC---CCCBCTTSBHH-HHHHHHHHHTCSEEEEECT-TSCEEEEEEHHHHHHHHH
T ss_pred HHcCCcHHHHcCC---CeEECCCCCHH-HHHHHHHHCCCcEEEEEcC-CCEEEEEEEHHHHHHHHH
Confidence 3467889999997 67899999998 9999999999999999974 378999999776655444
No 79
>4esy_A CBS domain containing membrane protein; structural genomics, PSI-biology; 2.01A {Sphaerobacter thermophilus}
Probab=97.41 E-value=3e-05 Score=70.12 Aligned_cols=56 Identities=14% Similarity=0.208 Sum_probs=48.6
Q ss_pred ccccccccccccCcceEEEeCCCChHHHHHHHHHHcCCccceEEeCCCCceEEEEEccchH
Q 011147 202 MTQKTAKDAMTAMSKIFSLDINSRLDEKTMGLIISNGHSRVPIYVGTPTNIIGAILGHSHM 262 (492)
Q Consensus 202 l~~~~V~diMtPr~~v~~l~~~~tl~~e~~~~i~~~~~SRiPV~~~~~d~IvGiv~~~d~m 262 (492)
....+|+++|++ ++++++.++++. ++++.+.+++..++||+++ ++++|+|+.+|++
T Consensus 102 ~~~~~v~~im~~--~~~tv~~~~~l~-~a~~~m~~~~~~~lpVvd~--g~lvGivt~~Dil 157 (170)
T 4esy_A 102 GRKLTASAVMTQ--PVVTAAPEDSVG-SIADQMRRHGIHRIPVVQD--GVPVGIVTRRDLL 157 (170)
T ss_dssp HTTCBHHHHCBC--CSCCBCTTSBHH-HHHHHHHHTTCSEEEEEET--TEEEEEEEHHHHT
T ss_pred ccccchhhhccc--CcccCCcchhHH-HHHHHHHHcCCcEEEEEEC--CEEEEEEEHHHHH
Confidence 346789999996 778899999998 9999999999999999974 7899999966543
No 80
>3lv9_A Putative transporter; CBS domain, PSI, MCSG, structural genomics, protein structur initiative, midwest center for structural genomics; 2.40A {Clostridium difficile 630}
Probab=97.41 E-value=0.00024 Score=62.24 Aligned_cols=59 Identities=12% Similarity=0.097 Sum_probs=50.4
Q ss_pred ccccccccccCcceEEEeCCCChHHHHHHHHHHcCCccceEEeCCCCceEEEEEccchHHHHHH
Q 011147 204 QKTAKDAMTAMSKIFSLDINSRLDEKTMGLIISNGHSRVPIYVGTPTNIIGAILGHSHMAVVVK 267 (492)
Q Consensus 204 ~~~V~diMtPr~~v~~l~~~~tl~~e~~~~i~~~~~SRiPV~~~~~d~IvGiv~~~d~m~~vvk 267 (492)
+.+++++|. ++.+++.++++. ++++.+.+++..++||+++ .++++|+|+.+|+++.++.
T Consensus 87 ~~~v~~~m~---~~~~v~~~~~l~-~~~~~m~~~~~~~l~Vvd~-~g~~~Giit~~dil~~l~~ 145 (148)
T 3lv9_A 87 KIELEEILR---DIIYISENLTID-KALERIRKEKLQLAIVVDE-YGGTSGVVTIEDILEEIVG 145 (148)
T ss_dssp CCCGGGTCB---CCEEEETTSBHH-HHHHHHHHHTCSEEEEECT-TSSEEEEEEHHHHHHHHHH
T ss_pred CccHHHhcC---CCeEECCCCCHH-HHHHHHHhcCCeEEEEEeC-CCCEEEEEEHHHHHHHHhC
Confidence 788999993 578899999998 9999999999999999974 4789999997777666554
No 81
>1vr9_A CBS domain protein/ACT domain protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI; HET: MSE; 1.70A {Thermotoga maritima} SCOP: d.37.1.1
Probab=97.41 E-value=5.6e-05 Score=71.34 Aligned_cols=92 Identities=10% Similarity=0.143 Sum_probs=64.5
Q ss_pred cCHHHHHHHHHhhccccCCCCCCChhHHHHHhhccccccc-------ccccccccCcceEEEeCCCChHHHHHHHHHHcC
Q 011147 166 LRRAELKTLVDMHGNEAGKGGELTHDETTIITGALDMTQK-------TAKDAMTAMSKIFSLDINSRLDEKTMGLIISNG 238 (492)
Q Consensus 166 ~s~eEL~~lv~~~~~e~~~~g~L~~~E~~iI~~vl~l~~~-------~V~diMtPr~~v~~l~~~~tl~~e~~~~i~~~~ 238 (492)
.+-+|...++..++. .+.+--++...+.|++..++. +|+++|++ ++.+++.++++. ++++.+.+++
T Consensus 30 ~tv~ea~~~m~~~~~----~~~pVvd~~~~l~Givt~~dl~~~~~~~~v~~im~~--~~~~v~~~~~l~-~a~~~m~~~~ 102 (213)
T 1vr9_A 30 ATVRECLHRMRQYQT----NECIVKDREGHFRGVVNKEDLLDLDLDSSVFNKVSL--PDFFVHEEDNIT-HALLLFLEHQ 102 (213)
T ss_dssp CBHHHHHHHHHHTTS----SEEEEECTTSBEEEEEEGGGGTTSCTTSBSGGGCBC--TTCCEETTSBHH-HHHHHHHHCC
T ss_pred CcHHHHHHHHHHCCC----CEEEEEcCCCEEEEEEEHHHHHhhcCCCcHHHHccC--CCEEECCCCcHH-HHHHHHHHhC
Confidence 456677777663221 121111122335566665554 59999997 678899999998 9999999999
Q ss_pred CccceEEeCCCCceEEEEEccchHHHH
Q 011147 239 HSRVPIYVGTPTNIIGAILGHSHMAVV 265 (492)
Q Consensus 239 ~SRiPV~~~~~d~IvGiv~~~d~m~~v 265 (492)
++++||++++ ++++|+|+.+|+++.+
T Consensus 103 ~~~lpVvd~~-g~lvGiit~~Dil~~~ 128 (213)
T 1vr9_A 103 EPYLPVVDEE-MRLKGAVSLHDFLEAL 128 (213)
T ss_dssp CSEEEEECTT-CBEEEEEEHHHHHHHH
T ss_pred CCEEEEEcCC-CEEEEEEEHHHHHHHH
Confidence 9999999753 7899999976665444
No 82
>3oco_A Hemolysin-like protein containing CBS domains; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; 2.20A {Oenococcus oeni}
Probab=97.37 E-value=0.00025 Score=62.72 Aligned_cols=62 Identities=11% Similarity=0.041 Sum_probs=51.7
Q ss_pred cccccccccccCcceEEEeCCCChHHHHHHHHHHcCCccceEEeCCCCceEEEEEccchHHHHHHhh
Q 011147 203 TQKTAKDAMTAMSKIFSLDINSRLDEKTMGLIISNGHSRVPIYVGTPTNIIGAILGHSHMAVVVKCK 269 (492)
Q Consensus 203 ~~~~V~diMtPr~~v~~l~~~~tl~~e~~~~i~~~~~SRiPV~~~~~d~IvGiv~~~d~m~~vvk~l 269 (492)
.+.+|+++| . ++.+++.++++. ++++.+.+++..++||+++ .++++|+|+.+|+++.++..+
T Consensus 84 ~~~~v~~~m-~--~~~~v~~~~~l~-~~~~~m~~~~~~~lpVvd~-~g~~vGivt~~dil~~l~~~~ 145 (153)
T 3oco_A 84 DKAKISTIM-R--DIVSVPENMKVP-DVMEEMSAHRVPMAIVIDE-YGGTSGIITDKDVYEELFGNL 145 (153)
T ss_dssp TTSBGGGTC-B--CCEEEETTSBHH-HHHHHHHHTTCSCEEEECT-TSCEEEEECHHHHHHHHHC--
T ss_pred CCCcHHHHh-C--CCeEECCCCCHH-HHHHHHHHcCCcEEEEEeC-CCCEEEEeeHHHHHHHHhccC
Confidence 367899999 3 678999999998 9999999999999999974 478999999887777666544
No 83
>3fhm_A Uncharacterized protein ATU1752; CBS domain, prokaryotic, bound nucleotide, AMP, NADH, struct genomics, PSI-2; HET: AMP NAI; 2.70A {Agrobacterium tumefaciens str}
Probab=97.36 E-value=0.00012 Score=65.72 Aligned_cols=61 Identities=20% Similarity=0.227 Sum_probs=51.3
Q ss_pred cccccccccccccCcceEEEeCCCChHHHHHHHHHHcCCccceEEeCCCCceEEEEEccchHHHHH
Q 011147 201 DMTQKTAKDAMTAMSKIFSLDINSRLDEKTMGLIISNGHSRVPIYVGTPTNIIGAILGHSHMAVVV 266 (492)
Q Consensus 201 ~l~~~~V~diMtPr~~v~~l~~~~tl~~e~~~~i~~~~~SRiPV~~~~~d~IvGiv~~~d~m~~vv 266 (492)
...+.+|+++|++ ++.+++.++++. ++++.+.+++++++||+++ ++++|+|+.+|+++.+.
T Consensus 89 ~~~~~~v~~~m~~--~~~~v~~~~~l~-~a~~~m~~~~~~~lpVvd~--g~~~Giit~~dil~~~~ 149 (165)
T 3fhm_A 89 ASLQQSVSVAMTK--NVVRCQHNSTTD-QLMEIMTGGRFRHVPVEEN--GRLAGIISIGDVVKARI 149 (165)
T ss_dssp GGGTSBGGGTSBS--SCCCBCTTCBHH-HHHHHHHHHTCSEEEEEET--TEEEEEEEHHHHHHHTT
T ss_pred ccccCCHHHHhcC--CCeEECCCCcHH-HHHHHHHHcCCCEEEEEEC--CEEEEEEEHHHHHHHHH
Confidence 3457899999985 677899999998 9999999999999999986 89999999666544443
No 84
>4gqw_A CBS domain-containing protein CBSX1, chloroplasti; thioredoxin, plant, protein binding; 2.20A {Arabidopsis thaliana}
Probab=97.35 E-value=0.00012 Score=63.65 Aligned_cols=63 Identities=14% Similarity=0.281 Sum_probs=51.0
Q ss_pred cccccccccccccCcceEEEeCCCChHHHHHHHHHHcCCccceEEeCCCCceEEEEEccchHHHHHH
Q 011147 201 DMTQKTAKDAMTAMSKIFSLDINSRLDEKTMGLIISNGHSRVPIYVGTPTNIIGAILGHSHMAVVVK 267 (492)
Q Consensus 201 ~l~~~~V~diMtPr~~v~~l~~~~tl~~e~~~~i~~~~~SRiPV~~~~~d~IvGiv~~~d~m~~vvk 267 (492)
...+.+|+++|++ ++.+++.++++. ++++.+.+++++++||+++ .++++|+|+.+|+++.+.+
T Consensus 81 ~~~~~~v~~~m~~--~~~~v~~~~~l~-~a~~~~~~~~~~~l~Vvd~-~g~~~Giit~~dil~~~~~ 143 (152)
T 4gqw_A 81 KTNGKLVGDLMTP--APLVVEEKTNLE-DAAKILLETKYRRLPVVDS-DGKLVGIITRGNVVRAALQ 143 (152)
T ss_dssp ---CCBHHHHSEE--SCCCEESSSBHH-HHHHHHHHSSCCEEEEECT-TSBEEEEEEHHHHHHHHHC
T ss_pred HhccccHHHhcCC--CceEECCCCcHH-HHHHHHHHCCCCEEEEECC-CCcEEEEEEHHHHHHHHHh
Confidence 3456789999997 567899999998 9999999999999999974 4789999997776655543
No 85
>3ghd_A A cystathionine beta-synthase domain protein FUSE ribbon-like domain; PF1953,APC40009,cystathionine beta-synthase domain protein; 1.81A {Pyrococcus furiosus}
Probab=97.33 E-value=0.00027 Score=55.37 Aligned_cols=45 Identities=13% Similarity=0.293 Sum_probs=39.6
Q ss_pred ceEEEeCCCChHHHHHHHHHHcCCccceEEeCCCCceEEEEEccchHH
Q 011147 216 KIFSLDINSRLDEKTMGLIISNGHSRVPIYVGTPTNIIGAILGHSHMA 263 (492)
Q Consensus 216 ~v~~l~~~~tl~~e~~~~i~~~~~SRiPV~~~~~d~IvGiv~~~d~m~ 263 (492)
+++++++++++. ++.+.+.+++++.+||.++ ++++|+++.+|+++
T Consensus 1 k~vtv~p~~tv~-ea~~~M~~~~i~~~~V~d~--~~lvGIvT~~Di~~ 45 (70)
T 3ghd_A 1 KAIVVQPKDTVD-RVAKILSRNKAGSAVVMEG--DEILGVVTERDILD 45 (70)
T ss_dssp CEEEECTTCBHH-HHHHHHHHTTCSEEEEEET--TEEEEEEEHHHHHH
T ss_pred CCEEECCCCcHH-HHHHHHHHcCCCEEEEEEC--CEEEEEEEHHHHHH
Confidence 467899999998 9999999999999999975 78999999776543
No 86
>3fio_A A cystathionine beta-synthase domain protein fused to A Zn-ribbon-like domain; PF1953,APC40009,cystathionine beta-synthase domain protein; 1.81A {Pyrococcus furiosus} PDB: 3ghd_A
Probab=97.32 E-value=0.00022 Score=54.39 Aligned_cols=44 Identities=11% Similarity=0.276 Sum_probs=38.5
Q ss_pred eEEEeCCCChHHHHHHHHHHcCCccceEEeCCCCceEEEEEccchHH
Q 011147 217 IFSLDINSRLDEKTMGLIISNGHSRVPIYVGTPTNIIGAILGHSHMA 263 (492)
Q Consensus 217 v~~l~~~~tl~~e~~~~i~~~~~SRiPV~~~~~d~IvGiv~~~d~m~ 263 (492)
+++++.++++. ++++.+.+++++++||+++ ++++|+|+.+|+++
T Consensus 2 ~~~v~~~~~~~-~a~~~m~~~~~~~~pV~d~--~~l~Givt~~dl~~ 45 (70)
T 3fio_A 2 AIVVQPKDTVD-RVAKILSRNKAGSAVVMEG--DEILGVVTERDILD 45 (70)
T ss_dssp EEEECTTCBHH-HHHHHHHHTTCSEEEEEET--TEEEEEEEHHHHHH
T ss_pred CeEECCCCcHH-HHHHHHHHcCCCEEEEEEC--CEEEEEEEHHHHHH
Confidence 57899999998 9999999999999999985 89999999665543
No 87
>2nyc_A Nuclear protein SNF4; bateman2 domain, AMP kinase, protein binding; 1.90A {Saccharomyces cerevisiae} SCOP: d.37.1.1 PDB: 2nye_A
Probab=97.29 E-value=0.00021 Score=61.69 Aligned_cols=63 Identities=13% Similarity=0.154 Sum_probs=50.3
Q ss_pred ccccccccccccCc----ceEEEeCCCChHHHHHHHHHHcCCccceEEeCCCCceEEEEEccchHHHHH
Q 011147 202 MTQKTAKDAMTAMS----KIFSLDINSRLDEKTMGLIISNGHSRVPIYVGTPTNIIGAILGHSHMAVVV 266 (492)
Q Consensus 202 l~~~~V~diMtPr~----~v~~l~~~~tl~~e~~~~i~~~~~SRiPV~~~~~d~IvGiv~~~d~m~~vv 266 (492)
..+.+++++|++.. ++.+++.++++. ++++.+.+++++++||+++ .++++|+|+.+|+++.+.
T Consensus 74 ~~~~~v~~~m~~~~~~~~~~~~v~~~~~l~-~~~~~m~~~~~~~l~Vvd~-~g~~~Giit~~dil~~l~ 140 (144)
T 2nyc_A 74 DLSLSVGEALMRRSDDFEGVYTCTKNDKLS-TIMDNIRKARVHRFFVVDD-VGRLVGVLTLSDILKYIL 140 (144)
T ss_dssp -CCSBHHHHHHHCC------CEECTTSBHH-HHHHHHHHHTCSEEEEECT-TSBEEEEEEHHHHHHHHH
T ss_pred cCCccHHHHHhcCccccCCCeEECCCCcHH-HHHHHHHHCCCCEEEEECC-CCCEEEEEEHHHHHHHHH
Confidence 44678999998653 678999999998 9999999999999999974 378999999776655443
No 88
>2o16_A Acetoin utilization protein ACUB, putative; structural genomics, unknown function, PSI-2, protein struct initiative; 1.90A {Vibrio cholerae} SCOP: d.37.1.1
Probab=97.29 E-value=0.00029 Score=62.80 Aligned_cols=63 Identities=10% Similarity=0.174 Sum_probs=53.4
Q ss_pred ccccccccccccCcceEEEeCCCChHHHHHHHHHHcCCccceEEeCCCCceEEEEEccchHHHHHHhh
Q 011147 202 MTQKTAKDAMTAMSKIFSLDINSRLDEKTMGLIISNGHSRVPIYVGTPTNIIGAILGHSHMAVVVKCK 269 (492)
Q Consensus 202 l~~~~V~diMtPr~~v~~l~~~~tl~~e~~~~i~~~~~SRiPV~~~~~d~IvGiv~~~d~m~~vvk~l 269 (492)
..+.+|+++|++ ++.+++.++++. ++++.+.+++.+++||+++ ++++|+|+.+|+++.+.+.+
T Consensus 75 ~~~~~v~~im~~--~~~~v~~~~~l~-~a~~~m~~~~~~~lpVvd~--g~lvGiit~~dil~~~~~~~ 137 (160)
T 2o16_A 75 AFETPLFEVMHT--DVTSVAPQAGLK-ESAIYMQKHKIGCLPVVAK--DVLVGIITDSDFVTIAINLL 137 (160)
T ss_dssp -CCCBHHHHSCS--CEEEBCTTSBHH-HHHHHHHHTTCSCEEEEET--TEEEEEECHHHHHHHHHHHH
T ss_pred hcccCHHHHhcC--CCeEECCCCCHH-HHHHHHHHhCCCEEEEEEC--CEEEEEEEHHHHHHHHHHHh
Confidence 356789999986 788999999998 9999999999999999985 79999999877766655443
No 89
>2ef7_A Hypothetical protein ST2348; CBS-domain, structural genomics, NPPSFA, national project on structural and functional analyses; 2.10A {Sulfolobus tokodaii} SCOP: d.37.1.1
Probab=97.26 E-value=0.00026 Score=60.50 Aligned_cols=61 Identities=16% Similarity=0.228 Sum_probs=51.0
Q ss_pred ccccccccccCcceEEEeCCCChHHHHHHHHHHcCCccceEEeCCCCceEEEEEccchHHHHHHh
Q 011147 204 QKTAKDAMTAMSKIFSLDINSRLDEKTMGLIISNGHSRVPIYVGTPTNIIGAILGHSHMAVVVKC 268 (492)
Q Consensus 204 ~~~V~diMtPr~~v~~l~~~~tl~~e~~~~i~~~~~SRiPV~~~~~d~IvGiv~~~d~m~~vvk~ 268 (492)
+.+++++|++ ++.+++.++++. ++++.+.+++++++||+++ .++++|+|+.+|+++.+.+.
T Consensus 66 ~~~v~~~~~~--~~~~v~~~~~l~-~~~~~~~~~~~~~l~Vvd~-~g~~~Giit~~dll~~~~~~ 126 (133)
T 2ef7_A 66 ETKAEEFMTA--SLITIREDSPIT-GALALMRQFNIRHLPVVDD-KGNLKGIISIRDITRAIDDM 126 (133)
T ss_dssp TCBGGGTSEE--CCCCEETTSBHH-HHHHHHHHHTCSEEEEECT-TSCEEEEEEHHHHHHHHHHH
T ss_pred ccCHHHHcCC--CCEEECCCCCHH-HHHHHHHHcCCCEEEEECC-CCeEEEEEEHHHHHHHHHHH
Confidence 5789999986 667899999998 9999999999999999974 37899999977765555443
No 90
>3i8n_A Uncharacterized protein VP2912; APC64273.1, vibrio parahaemolyticus RIMD 2210633, structural genomics, PSI-2; 2.15A {Vibrio parahaemolyticus}
Probab=97.26 E-value=0.00033 Score=60.07 Aligned_cols=59 Identities=15% Similarity=0.120 Sum_probs=49.2
Q ss_pred cccccccccccCcceEEEeCCCChHHHHHHHHHHcCCccceEEeCCCCceEEEEEccchHHHHH
Q 011147 203 TQKTAKDAMTAMSKIFSLDINSRLDEKTMGLIISNGHSRVPIYVGTPTNIIGAILGHSHMAVVV 266 (492)
Q Consensus 203 ~~~~V~diMtPr~~v~~l~~~~tl~~e~~~~i~~~~~SRiPV~~~~~d~IvGiv~~~d~m~~vv 266 (492)
.+.+++++|.| +.+++.++++. ++++.+.+++..++||+++ .++++|+|+.+|+++.++
T Consensus 70 ~~~~v~~~m~~---~~~v~~~~~l~-~~~~~m~~~~~~~~~Vvd~-~g~~vGivt~~dil~~l~ 128 (130)
T 3i8n_A 70 GQKQLGAVMRP---IQVVLNNTALP-KVFDQMMTHRLQLALVVDE-YGTVLGLVTLEDIFEHLV 128 (130)
T ss_dssp TTSBHHHHSEE---CCEEETTSCHH-HHHHHHHHHTCCEEEEECT-TSCEEEEEEHHHHHHHHH
T ss_pred CcCCHHHHhcC---CcCcCCCCcHH-HHHHHHHHcCCeEEEEEcC-CCCEEEEEEHHHHHHHHc
Confidence 36689999963 67899999998 9999999999999999974 478999999776655543
No 91
>3sl7_A CBS domain-containing protein CBSX2; CBS-PAIR protein, redox regulator, plant CBS domain, thiored chloroplast, membrane protein; 1.91A {Arabidopsis thaliana}
Probab=97.25 E-value=0.00018 Score=64.69 Aligned_cols=65 Identities=17% Similarity=0.276 Sum_probs=54.4
Q ss_pred cccccccccccccCcceEEEeCCCChHHHHHHHHHHcCCccceEEeCCCCceEEEEEccchHHHHHHhh
Q 011147 201 DMTQKTAKDAMTAMSKIFSLDINSRLDEKTMGLIISNGHSRVPIYVGTPTNIIGAILGHSHMAVVVKCK 269 (492)
Q Consensus 201 ~l~~~~V~diMtPr~~v~~l~~~~tl~~e~~~~i~~~~~SRiPV~~~~~d~IvGiv~~~d~m~~vvk~l 269 (492)
...+.+|+++|++ ++.+++.++++. ++++.+.+++++++||+++ .++++|+|+.+|+++.+.+..
T Consensus 94 ~~~~~~v~~~m~~--~~~~v~~~~~l~-~a~~~m~~~~~~~lpVvd~-~g~~vGiit~~dil~~~~~~~ 158 (180)
T 3sl7_A 94 KTYGKVVGDLMTP--SPLVVRDSTNLE-DAARLLLETKFRRLPVVDA-DGKLIGILTRGNVVRAALQIK 158 (180)
T ss_dssp TTTTCBHHHHSEE--SCCCEETTSBHH-HHHHHHTTSTTCEEEEECT-TCBEEEEEEHHHHHHHHHHHH
T ss_pred ccccccHHHHhCC--CceEeCCCCcHH-HHHHHHHHcCCCEEEEECC-CCeEEEEEEHHHHHHHHHHHh
Confidence 3457889999986 557799999998 9999999999999999974 478999999888777666543
No 92
>2uv4_A 5'-AMP-activated protein kinase subunit gamma-1; transferase, CBS domain, lipid synthesis, fatty acid biosynthesis; HET: AMP; 1.33A {Homo sapiens} PDB: 2uv5_A* 2uv6_A* 2uv7_A*
Probab=97.24 E-value=0.00031 Score=61.89 Aligned_cols=60 Identities=7% Similarity=0.117 Sum_probs=49.7
Q ss_pred cccccccccccC----cceEEEeCCCChHHHHHHHHHHcCCccceEEeCCCCceEEEEEccchHHH
Q 011147 203 TQKTAKDAMTAM----SKIFSLDINSRLDEKTMGLIISNGHSRVPIYVGTPTNIIGAILGHSHMAV 264 (492)
Q Consensus 203 ~~~~V~diMtPr----~~v~~l~~~~tl~~e~~~~i~~~~~SRiPV~~~~~d~IvGiv~~~d~m~~ 264 (492)
.+.+++++|.++ .++.+++.++++. ++++.+.+++.+++||+++ .++++|+|+..|+++.
T Consensus 85 ~~~~v~~~m~~~~~~~~~~~~v~~~~~l~-~a~~~m~~~~~~~lpVvd~-~g~~vGiit~~dil~~ 148 (152)
T 2uv4_A 85 LDVSVTKALQHRSHYFEGVLKCYLHETLE-TIINRLVEAEVHRLVVVDE-NDVVKGIVSLSDILQA 148 (152)
T ss_dssp TTSBGGGGGGTCCHHHHTCSEECTTSBHH-HHHHHHHHHTCSEEEEECT-TSBEEEEEEHHHHHHH
T ss_pred hcchHHHHHhhhhcccCCCeEECCCCcHH-HHHHHHHHcCCeEEEEECC-CCeEEEEEEHHHHHHH
Confidence 356799999764 5778899999998 9999999999999999975 3789999996665443
No 93
>3lqn_A CBS domain protein; csgid, structural genomics, unknown function, center for structural genomics of infectious diseases; 1.80A {Bacillus anthracis} SCOP: d.37.1.0
Probab=97.24 E-value=0.00055 Score=59.85 Aligned_cols=62 Identities=11% Similarity=0.163 Sum_probs=51.2
Q ss_pred ccccccccccccCcceEEEeCCCChHHHHHHHHHHcCCccceEEeCCCCceEEEEEccchHHHHHHhh
Q 011147 202 MTQKTAKDAMTAMSKIFSLDINSRLDEKTMGLIISNGHSRVPIYVGTPTNIIGAILGHSHMAVVVKCK 269 (492)
Q Consensus 202 l~~~~V~diMtPr~~v~~l~~~~tl~~e~~~~i~~~~~SRiPV~~~~~d~IvGiv~~~d~m~~vvk~l 269 (492)
..+.+|+++|++ ++.+++.++++. ++++.+.++++ +||+++ .++++|+|+.+|+++.+.+..
T Consensus 84 ~~~~~v~~~m~~--~~~~v~~~~~l~-~a~~~~~~~~~--l~Vvd~-~g~~~Giit~~dil~~l~~~~ 145 (150)
T 3lqn_A 84 LEEMKVEQVMKQ--DIPVLKLEDSFA-KALEMTIDHPF--ICAVNE-DGYFEGILTRRAILKLLNKKV 145 (150)
T ss_dssp GGGCBGGGTCBS--SCCEEETTCBHH-HHHHHHHHCSE--EEEECT-TCBEEEEEEHHHHHHHHHHHC
T ss_pred HhcCCHHHHhcC--CCceeCCCCCHH-HHHHHHHhCCE--EEEECC-CCcEEEEEEHHHHHHHHHHHh
Confidence 457889999985 678899999998 99999999887 999974 478999999877766665544
No 94
>3hf7_A Uncharacterized CBS-domain protein; CSB-domain PAIR, AMP, PSI, MCSG, STR genomics, midwest center for structural genomics; HET: AMP; 2.75A {Klebsiella pneumoniae subsp}
Probab=97.22 E-value=0.00031 Score=60.52 Aligned_cols=59 Identities=14% Similarity=0.088 Sum_probs=49.0
Q ss_pred cccccccccccCcceEEEeCCCChHHHHHHHHHHcCCccceEEeCCCCceEEEEEccchHHHHH
Q 011147 203 TQKTAKDAMTAMSKIFSLDINSRLDEKTMGLIISNGHSRVPIYVGTPTNIIGAILGHSHMAVVV 266 (492)
Q Consensus 203 ~~~~V~diMtPr~~v~~l~~~~tl~~e~~~~i~~~~~SRiPV~~~~~d~IvGiv~~~d~m~~vv 266 (492)
...+++++|. ++.+++.++++. ++++.+.+++..++||+++ .++++|+|+.+|+++.++
T Consensus 68 ~~~~v~~~m~---~~~~v~~~~~l~-~~~~~m~~~~~~~~~Vvd~-~g~lvGiit~~Dil~~l~ 126 (130)
T 3hf7_A 68 TKEIMLRAAD---EIYFVPEGTPLS-TQLVKFQRNKKKVGLVVDE-YGDIQGLVTVEDILEEIV 126 (130)
T ss_dssp CHHHHHHHSB---CCCEEETTCBHH-HHHHHHHHHCCCEEEEECT-TSCEEEEEEHHHHHHHHH
T ss_pred chhhHHHhcc---CCeEeCCCCcHH-HHHHHHHhcCCeEEEEEcC-CCCEEEEeeHHHHHHHHh
Confidence 4567899994 467899999998 9999999999999999974 378999999777665554
No 95
>3gby_A Uncharacterized protein CT1051; CBS domain, structural genomics, PSI-2, protein structure initiative; HET: EPE; 1.66A {Chlorobium tepidum tls}
Probab=97.22 E-value=0.0003 Score=60.08 Aligned_cols=57 Identities=11% Similarity=0.092 Sum_probs=48.1
Q ss_pred cccccccccCcceEEEeCCCChHHHHHHHHHHcCCccceEEeCCCCceEEEEEccchHHHH
Q 011147 205 KTAKDAMTAMSKIFSLDINSRLDEKTMGLIISNGHSRVPIYVGTPTNIIGAILGHSHMAVV 265 (492)
Q Consensus 205 ~~V~diMtPr~~v~~l~~~~tl~~e~~~~i~~~~~SRiPV~~~~~d~IvGiv~~~d~m~~v 265 (492)
.+++++|++ ++.+++.++++. ++++.+.+++..++||+++ .++++|+|+.+|+++.+
T Consensus 68 ~~v~~~m~~--~~~~v~~~~~l~-~~~~~~~~~~~~~lpVvd~-~g~~~Giit~~dll~~l 124 (128)
T 3gby_A 68 EKLGEELLE--TVRSYRPGEQLF-DNLISVAAAKCSVVPLADE-DGRYEGVVSRKRILGFL 124 (128)
T ss_dssp CBCCGGGCB--CCCCBCTTSBGG-GSHHHHHHCSSSEEEEECT-TCBEEEEEEHHHHHHHH
T ss_pred CcHHHHccC--CCcEECCCCCHH-HHHHHHHhCCCcEEEEECC-CCCEEEEEEHHHHHHHH
Confidence 679999985 667899999998 9999999999999999974 47899999976655444
No 96
>1y5h_A Hypothetical protein RV2626C; CBS domain, unknown function; 1.50A {Mycobacterium tuberculosis} SCOP: d.37.1.1 PDB: 1xkf_A
Probab=97.21 E-value=9.6e-05 Score=63.31 Aligned_cols=55 Identities=16% Similarity=0.324 Sum_probs=47.9
Q ss_pred ccccccccccccCcceEEEeCCCChHHHHHHHHHHcCCccceEEeCCCCceEEEEEccch
Q 011147 202 MTQKTAKDAMTAMSKIFSLDINSRLDEKTMGLIISNGHSRVPIYVGTPTNIIGAILGHSH 261 (492)
Q Consensus 202 l~~~~V~diMtPr~~v~~l~~~~tl~~e~~~~i~~~~~SRiPV~~~~~d~IvGiv~~~d~ 261 (492)
..+.+++++|++ ++.+++.++++. ++++.+.+++++++||+++ ++++|+|+.+|+
T Consensus 71 ~~~~~v~~~m~~--~~~~v~~~~~l~-~~~~~m~~~~~~~l~Vvd~--g~~~Giit~~di 125 (133)
T 1y5h_A 71 PNTATAGELARD--SIYYVDANASIQ-EMLNVMEEHQVRRVPVISE--HRLVGIVTEADI 125 (133)
T ss_dssp TTTSBHHHHHTT--CCCCEETTCCHH-HHHHHHHHHTCSEEEEEET--TEEEEEEEHHHH
T ss_pred ccccCHHHHhcC--CCEEECCCCCHH-HHHHHHHHcCCCEEEEEEC--CEEEEEEEHHHH
Confidence 356789999986 677899999998 9999999999999999986 799999995543
No 97
>3nqr_A Magnesium and cobalt efflux protein CORC; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics; HET: AMP; 2.00A {Salmonella typhimurium}
Probab=97.19 E-value=0.00026 Score=60.50 Aligned_cols=57 Identities=7% Similarity=0.042 Sum_probs=47.5
Q ss_pred cccccccccccCcceEEEeCCCChHHHHHHHHHHcCCccceEEeCCCCceEEEEEccchHHH
Q 011147 203 TQKTAKDAMTAMSKIFSLDINSRLDEKTMGLIISNGHSRVPIYVGTPTNIIGAILGHSHMAV 264 (492)
Q Consensus 203 ~~~~V~diMtPr~~v~~l~~~~tl~~e~~~~i~~~~~SRiPV~~~~~d~IvGiv~~~d~m~~ 264 (492)
.+.+++++|.| +.+++.++++. ++++.+.+++..++||+++ .++++|+|+.+|+++.
T Consensus 67 ~~~~v~~~m~~---~~~v~~~~~l~-~a~~~m~~~~~~~lpVvd~-~g~~~Giit~~dll~~ 123 (127)
T 3nqr_A 67 EAFSMDKVLRT---AVVVPESKRVD-RMLKEFRSQRYHMAIVIDE-FGGVSGLVTIEDILEL 123 (127)
T ss_dssp CCCCHHHHCBC---CCEEETTCBHH-HHHHHHHHTTCCEEEEECT-TSCEEEEEEHHHHHHH
T ss_pred CCCCHHHHcCC---CeEECCCCcHH-HHHHHHHhcCCeEEEEEeC-CCCEEEEEEHHHHHHH
Confidence 56789999965 46799999998 9999999999999999974 4789999996665443
No 98
>1pvm_A Conserved hypothetical protein TA0289; structural genomics, CBS domain, PSI, protein structure initiative; 1.50A {Thermoplasma acidophilum dsm 1728} SCOP: d.37.1.1 g.41.13.1 PDB: 2qh1_A
Probab=97.08 E-value=0.00044 Score=63.11 Aligned_cols=57 Identities=12% Similarity=0.174 Sum_probs=48.9
Q ss_pred ccccccccccccCcceEEEeCCCChHHHHHHHHHHcCCccceEEeCCCCceEEEEEccchH
Q 011147 202 MTQKTAKDAMTAMSKIFSLDINSRLDEKTMGLIISNGHSRVPIYVGTPTNIIGAILGHSHM 262 (492)
Q Consensus 202 l~~~~V~diMtPr~~v~~l~~~~tl~~e~~~~i~~~~~SRiPV~~~~~d~IvGiv~~~d~m 262 (492)
..+.+++++|.+ ++.+++.++++. ++++.+.+++++++||+++ .++++|+|+..|++
T Consensus 72 ~~~~~v~~im~~--~~~~v~~~~~l~-~a~~~m~~~~~~~lpVvd~-~g~~~Givt~~dll 128 (184)
T 1pvm_A 72 PDEVPIRLVMRK--PIPKVKSDYDVK-DVAAYLSENGLERCAVVDD-PGRVVGIVTLTDLS 128 (184)
T ss_dssp GGGSBGGGTSBS--SCCEEETTCBHH-HHHHHHHHHTCSEEEEECT-TCCEEEEEEHHHHT
T ss_pred cccCCHHHHhCC--CCcEECCCCCHH-HHHHHHHHcCCcEEEEEcC-CCeEEEEEEHHHHH
Confidence 567789999986 678899999998 9999999999999999975 37899999955543
No 99
>2p9m_A Hypothetical protein MJ0922; structural genomics, collaboratory for structural genomics, secsg; 2.59A {Methanocaldococcus jannaschii dsm 2661ORGANISM_TAXID}
Probab=97.08 E-value=0.00032 Score=60.29 Aligned_cols=60 Identities=13% Similarity=0.276 Sum_probs=49.0
Q ss_pred ccccccccccccCcceEEEeCCCChHHHHHHHHHHcC-----CccceEEeCCCCceEEEEEccchHHHH
Q 011147 202 MTQKTAKDAMTAMSKIFSLDINSRLDEKTMGLIISNG-----HSRVPIYVGTPTNIIGAILGHSHMAVV 265 (492)
Q Consensus 202 l~~~~V~diMtPr~~v~~l~~~~tl~~e~~~~i~~~~-----~SRiPV~~~~~d~IvGiv~~~d~m~~v 265 (492)
..+.+++++|++ ++.+++.++++. ++++.+.+++ ++++||+++ .++++|+|+.+|+++.+
T Consensus 70 ~~~~~v~~~m~~--~~~~v~~~~~l~-~~~~~~~~~~~~~~~~~~l~Vvd~-~g~~~Giit~~dll~~~ 134 (138)
T 2p9m_A 70 TLETTIGDVMTK--DVITIHEDASIL-EAIKKMDISGKKEEIINQLPVVDK-NNKLVGIISDGDIIRTI 134 (138)
T ss_dssp CSSCBHHHHSCS--SCCCEETTSBHH-HHHHHHTCC-----CCCEEEEECT-TSBEEEEEEHHHHHHHH
T ss_pred cCCcCHHHHhCC--CcEEECCCCCHH-HHHHHHHhcCCccccccEEEEECC-CCeEEEEEEHHHHHHHH
Confidence 356789999986 667899999998 9999999999 999999974 37899999976655444
No 100
>2emq_A Hypothetical conserved protein; CBS domains, NPPSFA, national project on protein structural functional analyses; 2.50A {Geobacillus kaustophilus}
Probab=97.01 E-value=0.0012 Score=57.88 Aligned_cols=62 Identities=18% Similarity=0.228 Sum_probs=51.2
Q ss_pred ccccccccccccCcceEEEeCCCChHHHHHHHHHHcCCccceEEeCCCCceEEEEEccchHHHHHHhh
Q 011147 202 MTQKTAKDAMTAMSKIFSLDINSRLDEKTMGLIISNGHSRVPIYVGTPTNIIGAILGHSHMAVVVKCK 269 (492)
Q Consensus 202 l~~~~V~diMtPr~~v~~l~~~~tl~~e~~~~i~~~~~SRiPV~~~~~d~IvGiv~~~d~m~~vvk~l 269 (492)
..+.+++++|++ ++.+++.++++. ++++.+.++++ +||+++ .++++|+|+.+|+++.+.+..
T Consensus 80 ~~~~~v~~~m~~--~~~~v~~~~~l~-~a~~~m~~~~~--l~Vvd~-~g~~~Giit~~dil~~~~~~~ 141 (157)
T 2emq_A 80 LETMKVEEVMNR--NIPRLRLDDSLM-KAVGLIVNHPF--VCVEND-DGYFAGIFTRREVLKQLNKQL 141 (157)
T ss_dssp GGTCBGGGTCBC--CCCEEETTSBHH-HHHHHHHHSSE--EEEECS-SSSEEEEEEHHHHHHHHHHTT
T ss_pred hcCCcHHHHhCC--CCceecCCCcHH-HHHHHHhhCCE--EEEEcC-CCeEEEEEEHHHHHHHHHHHh
Confidence 457889999986 678899999998 99999999987 999974 378999999777766555443
No 101
>2j9l_A Chloride channel protein 5; ION channel, ION transport, voltage-gated; HET: ATP; 2.30A {Homo sapiens} SCOP: d.37.1.1 PDB: 2ja3_A*
Probab=96.96 E-value=0.00088 Score=60.44 Aligned_cols=62 Identities=6% Similarity=0.125 Sum_probs=52.7
Q ss_pred ccccccccccccCcceEEEeCCCChHHHHHHHHHHcCCccceEEeCCCCceEEEEEccchHHHHHHh
Q 011147 202 MTQKTAKDAMTAMSKIFSLDINSRLDEKTMGLIISNGHSRVPIYVGTPTNIIGAILGHSHMAVVVKC 268 (492)
Q Consensus 202 l~~~~V~diMtPr~~v~~l~~~~tl~~e~~~~i~~~~~SRiPV~~~~~d~IvGiv~~~d~m~~vvk~ 268 (492)
..+.+|+++|++ ++.+++.++++. ++++.+.+++++++||++ .++++|+|+.+|+++.+.+.
T Consensus 105 ~~~~~v~~im~~--~~~~v~~~~~l~-~a~~~m~~~~~~~l~Vvd--~g~~vGiit~~dll~~l~~~ 166 (185)
T 2j9l_A 105 PPTLKLRNILDL--SPFTVTDLTPME-IVVDIFRKLGLRQCLVTH--NGRLLGIITKKDVLKHIAQM 166 (185)
T ss_dssp CCCEECGGGEES--SCCEEETTSBHH-HHHHHHHHHTCSEEEEEE--TTEEEEEEEHHHHHHHHHHH
T ss_pred ccCccHHHhhCc--CCeEeCCCCCHH-HHHHHHHhCCCcEEEEEE--CCEEEEEEEHHHHHHHHHHh
Confidence 456789999986 678899999998 999999999999999998 37899999987776665544
No 102
>2yzi_A Hypothetical protein PH0107; sheet/helix/sheet/sheet/helix, structural genomics, unknown function, NPPSFA; 2.25A {Pyrococcus horikoshii} SCOP: d.37.1.1
Probab=96.95 E-value=0.0012 Score=56.67 Aligned_cols=61 Identities=10% Similarity=0.177 Sum_probs=50.5
Q ss_pred ccccccccccccCcceEEEeCCCChHHHHHHHHHHcCCccceEEeCCCCceEEEEEccchHHHHHH
Q 011147 202 MTQKTAKDAMTAMSKIFSLDINSRLDEKTMGLIISNGHSRVPIYVGTPTNIIGAILGHSHMAVVVK 267 (492)
Q Consensus 202 l~~~~V~diMtPr~~v~~l~~~~tl~~e~~~~i~~~~~SRiPV~~~~~d~IvGiv~~~d~m~~vvk 267 (492)
..+.+++++|++ ++.+++.++++. ++++.+.+++++++ |+++ .++++|+|+.+|+++.+.+
T Consensus 69 ~~~~~v~~~m~~--~~~~v~~~~~l~-~~~~~m~~~~~~~l-Vvd~-~g~~~Giit~~dil~~~~~ 129 (138)
T 2yzi_A 69 PYDIPVERIMTR--NLITANVNTPLG-EVLRKMAEHRIKHI-LIEE-EGKIVGIFTLSDLLEASRR 129 (138)
T ss_dssp CTTSBGGGTCBC--SCCEEETTSBHH-HHHHHHHHHTCSEE-EEEE-TTEEEEEEEHHHHHHHHHC
T ss_pred cccCCHHHHhhC--CCeEECCCCcHH-HHHHHHHhcCCCEE-EECC-CCCEEEEEEHHHHHHHHHH
Confidence 356789999986 678899999998 99999999999999 9974 3789999997766555443
No 103
>3k2v_A Putative D-arabinose 5-phosphate isomerase; KPSF-like protein, CBS domain, structural genomics, PSI-2, P structure initiative; HET: MSE CMK; 1.95A {Klebsiella pneumoniae subsp} PDB: 3fna_A*
Probab=96.93 E-value=0.00055 Score=60.07 Aligned_cols=55 Identities=20% Similarity=0.255 Sum_probs=47.5
Q ss_pred cccccccccccccCcceEEEeCCCChHHHHHHHHHHcCCccceEEeCCCCceEEEEEccc
Q 011147 201 DMTQKTAKDAMTAMSKIFSLDINSRLDEKTMGLIISNGHSRVPIYVGTPTNIIGAILGHS 260 (492)
Q Consensus 201 ~l~~~~V~diMtPr~~v~~l~~~~tl~~e~~~~i~~~~~SRiPV~~~~~d~IvGiv~~~d 260 (492)
+..+.+|+++|++ ++.+++.++++. ++++.+.+++++++||++++ +++|+|+.+|
T Consensus 91 ~~~~~~v~~~m~~--~~~~v~~~~~l~-~a~~~m~~~~~~~lpVvd~~--~~~Giit~~d 145 (149)
T 3k2v_A 91 DMRDASIADVMTR--GGIRIRPGTLAV-DALNLMQSRHITCVLVADGD--HLLGVVHMHD 145 (149)
T ss_dssp CCTTCBHHHHSEE--SCCEECTTCBHH-HHHHHHHHHTCSEEEEEETT--EEEEEEEHHH
T ss_pred CcccCcHHHHcCC--CCeEECCCCCHH-HHHHHHHHcCCCEEEEecCC--EEEEEEEHHH
Confidence 3467899999986 567899999998 99999999999999999863 9999999544
No 104
>3k6e_A CBS domain protein; streptococcus pneumoniae TIGR4, structural genomics, PSI-2, protein structure initiative; 2.81A {Streptococcus pneumoniae}
Probab=96.92 E-value=0.00047 Score=61.81 Aligned_cols=63 Identities=10% Similarity=0.140 Sum_probs=51.3
Q ss_pred ccccccccccccCcceEEEeCCCChHHHHHHHHHHcCCccceEEeCCCCceEEEEEccchHHHHHHhhc
Q 011147 202 MTQKTAKDAMTAMSKIFSLDINSRLDEKTMGLIISNGHSRVPIYVGTPTNIIGAILGHSHMAVVVKCKN 270 (492)
Q Consensus 202 l~~~~V~diMtPr~~v~~l~~~~tl~~e~~~~i~~~~~SRiPV~~~~~d~IvGiv~~~d~m~~vvk~l~ 270 (492)
+.+.+|+++|++ ++.+++.++++. ++++.+.++++ +||+++ .++++|+|+.+|+++.+.+.+.
T Consensus 83 ~~~~~v~~im~~--~~~~v~~~~~l~-~~~~~m~~~~~--lpVVd~-~g~l~GiiT~~Dil~~~~~~~~ 145 (156)
T 3k6e_A 83 MADTDIVHMTKT--DVAVVSPDFTIT-EVLHKLVDESF--LPVVDA-EGIFQGIITRKSILKAVNALLH 145 (156)
T ss_dssp HTTSBGGGTCBC--SCCCBCTTCCHH-HHHHHTTTSSE--EEEECT-TSBEEEEEEHHHHHHHHHHHSC
T ss_pred ccccCHHHhhcC--CceecccccHHH-HHHHHHHHcCC--eEEEec-CCEEEEEEEHHHHHHHHHHHhc
Confidence 357789999985 678899999998 99999987665 999975 4789999998888777765543
No 105
>1yav_A Hypothetical protein BSU14130; cystathionine beta synthase (CBS) domain, structural genomics, protein structure initiative, PSI; 2.10A {Bacillus subtilis} SCOP: d.37.1.1
Probab=96.91 E-value=0.00077 Score=59.67 Aligned_cols=62 Identities=24% Similarity=0.288 Sum_probs=51.3
Q ss_pred ccccccccccccCcceEEEeCCCChHHHHHHHHHHcCCccceEEeCCCCceEEEEEccchHHHHHHhh
Q 011147 202 MTQKTAKDAMTAMSKIFSLDINSRLDEKTMGLIISNGHSRVPIYVGTPTNIIGAILGHSHMAVVVKCK 269 (492)
Q Consensus 202 l~~~~V~diMtPr~~v~~l~~~~tl~~e~~~~i~~~~~SRiPV~~~~~d~IvGiv~~~d~m~~vvk~l 269 (492)
..+.+|+++|.+ ++.+++.++++. ++++.+.++++ +||+++ .++++|+|+.+|+++.+.+.+
T Consensus 83 ~~~~~v~~~m~~--~~~~v~~~~~l~-~a~~~m~~~~~--lpVvd~-~g~~vGiit~~dil~~~~~~~ 144 (159)
T 1yav_A 83 LDQITVEEVMLT--DIPRLHINDPIM-KGFGMVINNGF--VCVEND-EQVFEGIFTRRVVLKELNKHI 144 (159)
T ss_dssp TTTSBHHHHSBC--SCCEEETTSBHH-HHHHHTTTCSE--EEEECT-TCBEEEEEEHHHHHHHHHHHC
T ss_pred hccCCHHHhcCC--CCceEcCCCCHH-HHHHHHHhCCE--EEEEeC-CCeEEEEEEHHHHHHHHHHHH
Confidence 567899999987 678899999998 99999988877 999974 378999999877766665544
No 106
>2rih_A Conserved protein with 2 CBS domains; bateman domain, AMP binding protein, ligand-BIND protein; 2.10A {Pyrobaculum aerophilum} SCOP: d.37.1.1 PDB: 2rif_A
Probab=96.90 E-value=0.00075 Score=58.41 Aligned_cols=55 Identities=11% Similarity=0.070 Sum_probs=47.3
Q ss_pred ccccccccccCcceEEEeCCCChHHHHHHHHHHcCCccceEEeCCCCceEEEEEccchHH
Q 011147 204 QKTAKDAMTAMSKIFSLDINSRLDEKTMGLIISNGHSRVPIYVGTPTNIIGAILGHSHMA 263 (492)
Q Consensus 204 ~~~V~diMtPr~~v~~l~~~~tl~~e~~~~i~~~~~SRiPV~~~~~d~IvGiv~~~d~m~ 263 (492)
+.+++++|++ ++.+++.+ ++. ++++.+.+++.+++||+++ .++++|+|+.+|+++
T Consensus 70 ~~~v~~~m~~--~~~~v~~~-~l~-~a~~~m~~~~~~~l~Vvd~-~g~~~Giit~~dll~ 124 (141)
T 2rih_A 70 DGPAMPIANS--PITVLDTD-PVH-VAAEKMRRHNIRHVVVVNK-NGELVGVLSIRDLCF 124 (141)
T ss_dssp TSBSGGGCBC--CCEEETTS-BHH-HHHHHHHHHTCSEEEEECT-TSCEEEEEEHHHHHS
T ss_pred CCCHHHHcCC--CCeEEcCC-CHH-HHHHHHHHcCCeEEEEEcC-CCcEEEEEEHHHHHH
Confidence 6789999986 77899999 998 9999999999999999974 478999999665543
No 107
>3kxr_A Magnesium transporter, putative; cystathionine beta-synthase, Mg2+ transporter, structural GE PSI-2, protein structure initiative; 2.41A {Shewanella oneidensis mr-1}
Probab=96.86 E-value=0.0011 Score=62.17 Aligned_cols=62 Identities=15% Similarity=0.166 Sum_probs=51.6
Q ss_pred ccccccccccccCcceEEEeCCCChHHHHHHHHHHcCCccceEEeCCCCceEEEEEccchHHHHHH
Q 011147 202 MTQKTAKDAMTAMSKIFSLDINSRLDEKTMGLIISNGHSRVPIYVGTPTNIIGAILGHSHMAVVVK 267 (492)
Q Consensus 202 l~~~~V~diMtPr~~v~~l~~~~tl~~e~~~~i~~~~~SRiPV~~~~~d~IvGiv~~~d~m~~vvk 267 (492)
..+.+|+++|++ ++++++.++++. ++++.+.+++...+||+++ .++++|+|+.+|++..+.+
T Consensus 113 ~~~~~v~~im~~--~~~~v~~~~~l~-~a~~~m~~~~~~~lpVVD~-~g~lvGiIT~~Dil~~i~~ 174 (205)
T 3kxr_A 113 EPHEPLISLLSE--DSRALTANTTLL-DAAEAIEHSREIELPVIDD-AGELIGRVTLRAATALVRE 174 (205)
T ss_dssp CTTSBGGGGCCS--SCCCEETTSCHH-HHHHHHHTSSCSEEEEECT-TSBEEEEEEHHHHHHHHHH
T ss_pred CCcchHHHHhcC--CCeEECCCCCHH-HHHHHHHhcCCCEEEEEcC-CCeEEEEEEHHHHHHHHHH
Confidence 356789999985 678899999998 9999999999999999974 4789999997766555543
No 108
>3ctu_A CBS domain protein; structural genomics, PSI-2, protein structure initiative, midwest center for structural genomics, MCSG; 2.81A {Streptococcus pneumoniae TIGR4} PDB: 3k6e_A
Probab=96.80 E-value=0.0009 Score=58.96 Aligned_cols=62 Identities=8% Similarity=0.102 Sum_probs=51.4
Q ss_pred cccccccccccCcceEEEeCCCChHHHHHHHHHHcCCccceEEeCCCCceEEEEEccchHHHHHHhhc
Q 011147 203 TQKTAKDAMTAMSKIFSLDINSRLDEKTMGLIISNGHSRVPIYVGTPTNIIGAILGHSHMAVVVKCKN 270 (492)
Q Consensus 203 ~~~~V~diMtPr~~v~~l~~~~tl~~e~~~~i~~~~~SRiPV~~~~~d~IvGiv~~~d~m~~vvk~l~ 270 (492)
.+.+|+++|++ ++.+++.++++. ++++.+.+++ ++||+++ .++++|+|+.+|+++.+.+.+.
T Consensus 84 ~~~~v~~~m~~--~~~~v~~~~~l~-~a~~~~~~~~--~lpVvd~-~g~~~Giit~~dil~~l~~~~~ 145 (156)
T 3ctu_A 84 ADTDIVHMTKT--DVAVVSPDFTIT-EVLHKLVDES--FLPVVDA-EGIFQGIITRKSILKAVNALLH 145 (156)
T ss_dssp TTSBGGGGCBC--SCCCBCSSCCHH-HHHHHTTTSS--EEEEECT-TSBEEEEEETTHHHHHHHHHSC
T ss_pred ccCcHHHhccC--CceeeCCCCcHH-HHHHHHHHcC--eEEEEcC-CCeEEEEEEHHHHHHHHHHHHH
Confidence 47889999985 677899999998 9999998776 6999974 4789999999988777766554
No 109
>3oi8_A Uncharacterized protein; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: ADN; 1.99A {Neisseria meningitidis serogroup B}
Probab=96.80 E-value=0.0007 Score=60.14 Aligned_cols=53 Identities=8% Similarity=-0.056 Sum_probs=45.8
Q ss_pred cccccccccccCcceEEEeCCCChHHHHHHHHHHcCCccceEEeCCCCceEEEEEccc
Q 011147 203 TQKTAKDAMTAMSKIFSLDINSRLDEKTMGLIISNGHSRVPIYVGTPTNIIGAILGHS 260 (492)
Q Consensus 203 ~~~~V~diMtPr~~v~~l~~~~tl~~e~~~~i~~~~~SRiPV~~~~~d~IvGiv~~~d 260 (492)
.+.+++++|+| +.+++.++++. ++++.+.+++..++||+++ .++++|+|+.+|
T Consensus 101 ~~~~v~~im~~---~~~v~~~~~l~-~a~~~m~~~~~~~~~Vvd~-~g~~~Givt~~D 153 (156)
T 3oi8_A 101 EQFHLKSILRP---AVFVPEGKSLT-ALLKEFREQRNHMAIVIDE-YGGTSGLVTFED 153 (156)
T ss_dssp GGCCHHHHCBC---CCEEETTSBHH-HHHHHHHHTTCCEEEEECT-TSSEEEEEEHHH
T ss_pred CcccHHHHcCC---CEEECCCCCHH-HHHHHHHhcCCeEEEEECC-CCCEEEEEEHHH
Confidence 56789999975 67899999998 9999999999999999974 378999998444
No 110
>3fio_A A cystathionine beta-synthase domain protein fused to A Zn-ribbon-like domain; PF1953,APC40009,cystathionine beta-synthase domain protein; 1.81A {Pyrococcus furiosus} PDB: 3ghd_A
Probab=96.74 E-value=0.002 Score=48.83 Aligned_cols=38 Identities=16% Similarity=0.341 Sum_probs=34.0
Q ss_pred HHHHHHHHhHcCcc-eEEecccCCCCCCCcEEEEechhHHHHHHcc
Q 011147 337 LHLCLKKWERQDVK-ISKEELESLPSVDEEVIGIITLEDVMEELLQ 381 (492)
Q Consensus 337 l~~~l~~~~~~~~~-~lVv~~~~~pde~g~vvGIITlEDViEeLlg 381 (492)
+.++++.|++++.+ ++|+ |+ |+++|+||..|+++.+..
T Consensus 11 ~~~a~~~m~~~~~~~~pV~------d~-~~l~Givt~~dl~~~~~~ 49 (70)
T 3fio_A 11 VDRVAKILSRNKAGSAVVM------EG-DEILGVVTERDILDKVVA 49 (70)
T ss_dssp HHHHHHHHHHTTCSEEEEE------ET-TEEEEEEEHHHHHHHTTT
T ss_pred HHHHHHHHHHcCCCEEEEE------EC-CEEEEEEEHHHHHHHHHH
Confidence 67789999999988 9998 55 999999999999999876
No 111
>3ocm_A Putative membrane protein; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: ADP; 1.80A {Bordetella parapertussis}
Probab=96.51 E-value=0.0023 Score=58.24 Aligned_cols=61 Identities=7% Similarity=-0.055 Sum_probs=49.6
Q ss_pred cccccccccccCcceEEEeCCCChHHHHHHHHHHcCCccceEEeCCCCceEEEEEccchHHHHHHhh
Q 011147 203 TQKTAKDAMTAMSKIFSLDINSRLDEKTMGLIISNGHSRVPIYVGTPTNIIGAILGHSHMAVVVKCK 269 (492)
Q Consensus 203 ~~~~V~diMtPr~~v~~l~~~~tl~~e~~~~i~~~~~SRiPV~~~~~d~IvGiv~~~d~m~~vvk~l 269 (492)
.+.+++ +|. ++.+++.++++. ++++.+.+++..++||+++ .++++|+|+.+|+++.++..+
T Consensus 99 ~~~~v~-~~~---~~~~v~~~~~l~-~al~~m~~~~~~~~~Vvde-~g~lvGiIT~~Dil~~l~~~i 159 (173)
T 3ocm_A 99 GRVRRN-RLR---DPIIVHESIGIL-RLMDTLKRSRGQLVLVADE-FGAIEGLVTPIDVFEAIAGEF 159 (173)
T ss_dssp SSCCGG-GSB---CCCEECGGGCHH-HHHHHHHHSTTCCEEEECT-TCCEEEEECHHHHHHHHHCCC
T ss_pred CcchhH-hcC---CCeEECCCCcHH-HHHHHHHHcCCeEEEEEeC-CCCEEEEEeHHHHHHHHhCcC
Confidence 456777 553 567899999998 9999999999999999974 478999999888777766544
No 112
>2pfi_A Chloride channel protein CLC-Ka; cystathionine beta synthetase (CBS) domains containing protein, transport protein; 1.60A {Homo sapiens}
Probab=96.48 E-value=0.0021 Score=56.56 Aligned_cols=64 Identities=9% Similarity=0.053 Sum_probs=51.6
Q ss_pred cccccccccccCc----ceEEEeCCCChHHHHHHHHHHcCCccceEEeCCCCceEEEEEccchHHHHHHhh
Q 011147 203 TQKTAKDAMTAMS----KIFSLDINSRLDEKTMGLIISNGHSRVPIYVGTPTNIIGAILGHSHMAVVVKCK 269 (492)
Q Consensus 203 ~~~~V~diMtPr~----~v~~l~~~~tl~~e~~~~i~~~~~SRiPV~~~~~d~IvGiv~~~d~m~~vvk~l 269 (492)
.+.+++++|.+.. .+.+++.++++. ++++.+.+++.+++||+++ ++++|+|+.+|+++.+.+..
T Consensus 82 ~~~~v~~~m~~~~~~~~~~~~v~~~~~l~-~~~~~m~~~~~~~lpVvd~--g~l~Giit~~dil~~~~~~~ 149 (164)
T 2pfi_A 82 HQQCLQDILARGCPTEPVTLTLFSETTLH-QAQNLFKLLNLQSLFVTSR--GRAVGCVSWVEMKKAISNLT 149 (164)
T ss_dssp CCCBHHHHHHTTCCCBCCCCCEETTCBHH-HHHHHHHHTTCSEEEEEET--TEEEEEEEHHHHHHHHHHHH
T ss_pred ccchhhhhhcccccccCCceEECCCCcHH-HHHHHHHHhCCCEEEEEEC--CEEEEEEEHHHHHHHHHhhh
Confidence 4567899997531 157899999998 9999999999999999983 78999999877766655443
No 113
>3ghd_A A cystathionine beta-synthase domain protein FUSE ribbon-like domain; PF1953,APC40009,cystathionine beta-synthase domain protein; 1.81A {Pyrococcus furiosus}
Probab=96.48 E-value=0.0041 Score=48.47 Aligned_cols=38 Identities=16% Similarity=0.352 Sum_probs=34.2
Q ss_pred HHHHHHHHhHcCcc-eEEecccCCCCCCCcEEEEechhHHHHHHcc
Q 011147 337 LHLCLKKWERQDVK-ISKEELESLPSVDEEVIGIITLEDVMEELLQ 381 (492)
Q Consensus 337 l~~~l~~~~~~~~~-~lVv~~~~~pde~g~vvGIITlEDViEeLlg 381 (492)
+.+|.+.|.+++.+ ++|+ ++|+++||||-.|++..++.
T Consensus 11 v~ea~~~M~~~~i~~~~V~-------d~~~lvGIvT~~Di~~~~~~ 49 (70)
T 3ghd_A 11 VDRVAKILSRNKAGSAVVM-------EGDEILGVVTERDILDKVVA 49 (70)
T ss_dssp HHHHHHHHHHTTCSEEEEE-------ETTEEEEEEEHHHHHHHTTT
T ss_pred HHHHHHHHHHcCCCEEEEE-------ECCEEEEEEEHHHHHHHHHh
Confidence 67889999999999 8888 47899999999999999876
No 114
>2yvy_A MGTE, Mg2+ transporter MGTE; membrane protein, transport protein; 2.30A {Thermus thermophilus} PDB: 2yvz_A
Probab=96.31 E-value=0.0024 Score=62.48 Aligned_cols=59 Identities=10% Similarity=0.256 Sum_probs=49.6
Q ss_pred cccccccccccCcceEEEeCCCChHHHHHHHHHHcCCccceEEeCCCCceEEEEEccchHHHH
Q 011147 203 TQKTAKDAMTAMSKIFSLDINSRLDEKTMGLIISNGHSRVPIYVGTPTNIIGAILGHSHMAVV 265 (492)
Q Consensus 203 ~~~~V~diMtPr~~v~~l~~~~tl~~e~~~~i~~~~~SRiPV~~~~~d~IvGiv~~~d~m~~v 265 (492)
.+.+|+++|++ ++.+++.++++. ++++.+.+++...+||+++ .++++|+|+..|++..+
T Consensus 197 ~~~~v~~im~~--~~~~v~~~~~l~-~a~~~m~~~~~~~lpVvd~-~g~lvGivT~~Dil~~i 255 (278)
T 2yvy_A 197 PRTRVAEIMNP--KVVYVRTDTDQE-EVARLMADYDFTVLPVVDE-EGRLVGIVTVDDVLDVL 255 (278)
T ss_dssp TTCBSTTTSBS--SCCCEETTSBHH-HHHHHHHHHTCSEEEEECT-TSBEEEEEEHHHHHHHC
T ss_pred CCCcHHHHhCC--CCeEEeCCCCHH-HHHHHHHhcCCCEEEEEeC-CCeEEEEEEHHHHHHHH
Confidence 57789999975 678899999998 9999999999999999974 37899999966554433
No 115
>2oux_A Magnesium transporter; 10001B, structural genomics, PSI-2, P structure initiative, nysgxrc; 2.16A {Enterococcus faecalis} SCOP: a.118.26.1 d.37.1.1
Probab=96.20 E-value=0.0035 Score=61.84 Aligned_cols=61 Identities=11% Similarity=0.209 Sum_probs=51.4
Q ss_pred cccccccccccCcceEEEeCCCChHHHHHHHHHHcCCccceEEeCCCCceEEEEEccchHHHHHH
Q 011147 203 TQKTAKDAMTAMSKIFSLDINSRLDEKTMGLIISNGHSRVPIYVGTPTNIIGAILGHSHMAVVVK 267 (492)
Q Consensus 203 ~~~~V~diMtPr~~v~~l~~~~tl~~e~~~~i~~~~~SRiPV~~~~~d~IvGiv~~~d~m~~vvk 267 (492)
.+.+|+++|++ ++.+++.++++. ++.+.+.+++..++||+++ .++++|+|+..|++..+.+
T Consensus 199 ~~~~v~~im~~--~~~~v~~~~~l~-ea~~~m~~~~~~~lpVVd~-~g~lvGiIT~~Dil~~i~~ 259 (286)
T 2oux_A 199 DDTLIADILNE--RVISVHVGDDQE-DVAQTIRDYDFLAVPVTDY-DDHLLGIVTVDDIIDVIDD 259 (286)
T ss_dssp TTSBHHHHSBS--CCCCEETTSBHH-HHHHHHHHHTCSEEEEECT-TCBEEEEEEHHHHHHHHHH
T ss_pred CCCcHHHHcCC--CCeeecCCCCHH-HHHHHHHHcCCcEEEEEcC-CCeEEEEEEHHHHHHHHHH
Confidence 56789999985 678899999998 9999999999999999974 4789999997776655543
No 116
>1me8_A Inosine-5'-monophosphate dehydrogenase; alpha beta barrel, oxidoreductase; HET: RVP; 1.90A {Tritrichomonas foetus} SCOP: c.1.5.1 PDB: 1ak5_A* 1me7_A* 1me9_A* 1meh_A* 1mei_A* 1mew_A* 1pvn_A* 1lrt_A*
Probab=95.73 E-value=0.0017 Score=69.50 Aligned_cols=62 Identities=18% Similarity=0.239 Sum_probs=0.0
Q ss_pred cccccccccccCcceEEEeCCCChHHHHHHHHHHcCCccceEEeCCCCceEEEEEccchHHHHH
Q 011147 203 TQKTAKDAMTAMSKIFSLDINSRLDEKTMGLIISNGHSRVPIYVGTPTNIIGAILGHSHMAVVV 266 (492)
Q Consensus 203 ~~~~V~diMtPr~~v~~l~~~~tl~~e~~~~i~~~~~SRiPV~~~~~d~IvGiv~~~d~m~~vv 266 (492)
.+.+|+|+|+|..++++++.++++. ++++.+.+++.+++||++++ ++++|+|+.+|+++.+.
T Consensus 159 ~~~~V~diM~~~~~~~tv~~~~sl~-ea~~~m~~~~i~~lpVVDe~-g~lvGiIT~~Dil~~~~ 220 (503)
T 1me8_A 159 TETKVSDMMTPFSKLVTAHQDTKLS-EANKIIWEKKLNALPIIDDD-QHLRYIVFRKDYDRSQV 220 (503)
T ss_dssp ----------------------------------------------------------------
T ss_pred ccCcHHHHhCCCCCCEEEcCCCcHH-HHHHHHHHcCCCEEEEEcCC-CeEEEEEEecHHHHhhh
Confidence 4568999999877789999999998 99999999999999999854 78999999777655444
No 117
>2zy9_A Mg2+ transporter MGTE; membrane protien, metal transport; 2.94A {Thermus thermophilus} PDB: 2yvx_A
Probab=95.65 E-value=0.0098 Score=63.06 Aligned_cols=61 Identities=10% Similarity=0.236 Sum_probs=52.1
Q ss_pred cccccccccccCcceEEEeCCCChHHHHHHHHHHcCCccceEEeCCCCceEEEEEccchHHHHHH
Q 011147 203 TQKTAKDAMTAMSKIFSLDINSRLDEKTMGLIISNGHSRVPIYVGTPTNIIGAILGHSHMAVVVK 267 (492)
Q Consensus 203 ~~~~V~diMtPr~~v~~l~~~~tl~~e~~~~i~~~~~SRiPV~~~~~d~IvGiv~~~d~m~~vvk 267 (492)
.+.+++++|++ ++.+++.++++. ++.+.+.+++...+||+++ .++++|+|+.+|+++.+.+
T Consensus 217 ~~~~v~dim~~--~~~~v~~~~~l~-ea~~~m~~~~~~~lpVVDe-~g~lvGiIT~~Dil~~i~~ 277 (473)
T 2zy9_A 217 PRTRVAEIMNP--KVVYVRTDTDQE-EVARLMADYDFTVLPVVDE-EGRLVGIVTVDDVLDVLEA 277 (473)
T ss_dssp TTSBGGGTSBS--SCCCEESSSBHH-HHHHHHHHHTCSEEEEECT-TSBEEEEEEHHHHHHHHHH
T ss_pred CCCcHHHHhCC--CCeEEeCCCcHH-HHHHHHHhcCCcEEEEEcC-CCEEEEEEehHhhHHHHHH
Confidence 57799999985 678899999998 9999999999999999975 4789999997776655543
No 118
>3usb_A Inosine-5'-monophosphate dehydrogenase; structural genomics, center for structural genomics of infec diseases, csgid, TIM barrel, CBS-domain; HET: MSE IMP; 2.38A {Bacillus anthracis} PDB: 3tsd_A* 3tsb_A*
Probab=95.52 E-value=0.009 Score=64.07 Aligned_cols=59 Identities=12% Similarity=0.139 Sum_probs=50.6
Q ss_pred ccccccccccccCcceEEEeCCCChHHHHHHHHHHcCCccceEEeCCCCceEEEEEccchHH
Q 011147 202 MTQKTAKDAMTAMSKIFSLDINSRLDEKTMGLIISNGHSRVPIYVGTPTNIIGAILGHSHMA 263 (492)
Q Consensus 202 l~~~~V~diMtPr~~v~~l~~~~tl~~e~~~~i~~~~~SRiPV~~~~~d~IvGiv~~~d~m~ 263 (492)
-.+.+|+++|++ .++++++.+.++. ++++.+.+++..++||+++ .++++|+|+.+|+++
T Consensus 172 ~~~~~V~~vM~~-~~~vtv~~~~~l~-eal~~m~~~~i~~lpVVDe-~g~l~GiIT~~Dil~ 230 (511)
T 3usb_A 172 DYSIKISDVMTK-EQLITAPVGTTLS-EAEKILQKYKIEKLPLVDN-NGVLQGLITIKDIEK 230 (511)
T ss_dssp CSSSBHHHHCCC-CCCCCEETTCCHH-HHHHHHHHHTCSEEEEECT-TSBEEEEEEHHHHHH
T ss_pred cCCCcHHHhccc-CCCEEECCCCCHH-HHHHHHHHcCCCEEEEEeC-CCCEeeeccHHHHHH
Confidence 456789999997 6788999999998 9999999999999999975 478999999655443
No 119
>3org_A CMCLC; transporter, transport protein; 3.50A {Cyanidioschyzon merolae}
Probab=95.47 E-value=0.011 Score=65.07 Aligned_cols=51 Identities=8% Similarity=-0.037 Sum_probs=43.6
Q ss_pred ccccccccCcceEEEeCCCChHHHHHHHHHHcCCccceEEeCCCCceEEEEEccch
Q 011147 206 TAKDAMTAMSKIFSLDINSRLDEKTMGLIISNGHSRVPIYVGTPTNIIGAILGHSH 261 (492)
Q Consensus 206 ~V~diMtPr~~v~~l~~~~tl~~e~~~~i~~~~~SRiPV~~~~~d~IvGiv~~~d~ 261 (492)
+++|+|++ ++.+++.++++. |+.+.+.+++..++||.++ ++++|+|+.+|+
T Consensus 569 ~v~~iMt~--~pitV~~~~~l~-ea~~~M~~~~i~~lpVve~--G~lvGIVT~~Dl 619 (632)
T 3org_A 569 SLVVPCDV--SPIVVTSYSLVR-QLHFLFVMLMPSMIYVTER--GKLVGIVEREDV 619 (632)
T ss_dssp --CCSCCC--CCCEEETTCBHH-HHHHHHHHTCCSEEEEEET--TEEEEEEEGGGT
T ss_pred ccchhhcC--CCceecCCCcHH-HHHHHHHhcCCCEEEEEEC--CEEEEEEehhhH
Confidence 48999985 667899999998 9999999999999999943 789999997665
No 120
>4avf_A Inosine-5'-monophosphate dehydrogenase; oxidoreductase; 2.23A {Pseudomonas aeruginosa}
Probab=95.17 E-value=0.0034 Score=66.95 Aligned_cols=59 Identities=12% Similarity=0.081 Sum_probs=0.0
Q ss_pred cccccccccccCcceEEEeCCCChHHHHHHHHHHcCCccceEEeCCCCceEEEEEccchHH
Q 011147 203 TQKTAKDAMTAMSKIFSLDINSRLDEKTMGLIISNGHSRVPIYVGTPTNIIGAILGHSHMA 263 (492)
Q Consensus 203 ~~~~V~diMtPr~~v~~l~~~~tl~~e~~~~i~~~~~SRiPV~~~~~d~IvGiv~~~d~m~ 263 (492)
.+.+|+|+|+|+.++++++.++++. ++++.+.+++..++||+++ .++++|+|+.+|+++
T Consensus 145 ~~~~V~~vMtp~~~~vtv~~~~~l~-ea~~~m~~~~i~~lpVVDe-~g~lvGiIT~~Dil~ 203 (490)
T 4avf_A 145 AGDTVAAIMTPKDKLVTAREGTPLE-EMKAKLYENRIEKMLVVDE-NFYLRGLVTFRDIEK 203 (490)
T ss_dssp -------------------------------------------------------------
T ss_pred cCCcHHHHhccCCCCEEECCCCcHH-HHHHHHHHcCCCEEEEEcC-CCcEEEEEehHHhhh
Confidence 4678999999877789999999998 9999999999999999974 478999999766543
No 121
>1vrd_A Inosine-5'-monophosphate dehydrogenase; TM1347, structural G joint center for structural genomics, JCSG, protein structu initiative, PSI; 2.18A {Thermotoga maritima} SCOP: c.1.5.1
Probab=95.07 E-value=0.0045 Score=65.80 Aligned_cols=62 Identities=21% Similarity=0.304 Sum_probs=3.5
Q ss_pred cccccccccccCcceEEEeCCCChHHHHHHHHHHcCCccceEEeCCCCceEEEEEccchHHHHH
Q 011147 203 TQKTAKDAMTAMSKIFSLDINSRLDEKTMGLIISNGHSRVPIYVGTPTNIIGAILGHSHMAVVV 266 (492)
Q Consensus 203 ~~~~V~diMtPr~~v~~l~~~~tl~~e~~~~i~~~~~SRiPV~~~~~d~IvGiv~~~d~m~~vv 266 (492)
.+.+|+++|+++.++.+++.++++. ++++.+.+++..++||+++ .++++|+|+.+|+++.+.
T Consensus 153 ~~~~v~~im~~~~~~~~v~~~~~l~-ea~~~m~~~~~~~lpVVd~-~g~lvGiIt~~Dll~~~~ 214 (494)
T 1vrd_A 153 LSKKIKDLMTPREKLIVAPPDISLE-KAKEILHQHRIEKLPLVSK-DNKLVGLITIKDIMSVIE 214 (494)
T ss_dssp ----------------------------------------------------------CHHHHT
T ss_pred CCCcHHHHhCCCCCCeEECCCCCHH-HHHHHHHHcCCcEEEEEcC-CCeEEEEEEHHHHHhhhc
Confidence 4568999999877889999999998 9999999999999999975 478999999888766543
No 122
>4fxs_A Inosine-5'-monophosphate dehydrogenase; structural genomics, IMPDH, IMP, mycophenolic acid, MOA; HET: IMP MOA; 2.24A {Vibrio cholerae o1 biovar el tor}
Probab=94.87 E-value=0.0049 Score=65.87 Aligned_cols=58 Identities=9% Similarity=0.090 Sum_probs=43.0
Q ss_pred cccccccccccCcceEEEeCCCChHHHHHHHHHHcCCccceEEeCCCCceEEEEEccchH
Q 011147 203 TQKTAKDAMTAMSKIFSLDINSRLDEKTMGLIISNGHSRVPIYVGTPTNIIGAILGHSHM 262 (492)
Q Consensus 203 ~~~~V~diMtPr~~v~~l~~~~tl~~e~~~~i~~~~~SRiPV~~~~~d~IvGiv~~~d~m 262 (492)
.+.+++|+|+|+.++++++.+.++. ++++.+.+++..++||+|+ .++++|+|+.+|++
T Consensus 147 ~~~~v~diM~p~~~~vtv~~~~~l~-ea~~~m~~~~i~~lpVVDe-~G~l~GiIT~~DIl 204 (496)
T 4fxs_A 147 LTKSVAAVMTPKERLATVKEGATGA-EVQEKMHKARVEKILVVND-EFQLKGMITAKDFH 204 (496)
T ss_dssp TTSBGGGTSEEGGGCCEEECC-----CGGGTCC---CCCEEEECT-TSBCCEEECCC---
T ss_pred CCCcHHHHhcCCCCCEEECCCCCHH-HHHHHHHHcCCCEEEEEcC-CCCEEEeehHhHHH
Confidence 5678999999877789999999998 9999999999999999975 47899999977654
No 123
>3pc3_A CG1753, isoform A; CBS, synthase, PLP, heme, aminoacrylate, lyase; HET: HEM P1T; 1.55A {Drosophila melanogaster} PDB: 3pc2_A* 3pc4_A*
Probab=94.32 E-value=0.031 Score=59.83 Aligned_cols=72 Identities=14% Similarity=0.137 Sum_probs=52.6
Q ss_pred HHHHHhhcc---cccccccccccccCcceEEEeCCCChHHHHHHHHHHcCCccceEEeCC---CCceEEEEEccchHHHH
Q 011147 192 ETTIITGAL---DMTQKTAKDAMTAMSKIFSLDINSRLDEKTMGLIISNGHSRVPIYVGT---PTNIIGAILGHSHMAVV 265 (492)
Q Consensus 192 E~~iI~~vl---~l~~~~V~diMtPr~~v~~l~~~~tl~~e~~~~i~~~~~SRiPV~~~~---~d~IvGiv~~~d~m~~v 265 (492)
++++++.+. ...+.+|+++|++ ++.+++.++++. ++++.|.++++ .||++++ .++++|||+.+|+++.+
T Consensus 435 ~~Dll~~l~~~~~~~~~~V~~im~~--~~~~v~~~~~l~-~a~~~m~~~~~--~pVVd~~~~~~g~lvGIVT~~Dll~~l 509 (527)
T 3pc3_A 435 QETLITQIVSMNRQQSDPAIKALNK--RVIRLNESEILG-KLARVLEVDPS--VLILGKNPAGKVELKALATKLDVTTFI 509 (527)
T ss_dssp HHHHHHHHHHHCCCTTSBGGGGEET--TCCEEETTSBHH-HHHHHHTTCSE--EEEEEECSSSCEEEEEEEEHHHHHHHH
T ss_pred HHHHHHHHHhccCcCCCcHHHHhcC--CCeEECCCCcHH-HHHHHHhhCCE--EEEEeCCcccCCeEEEEEEHHHHHHHH
Confidence 445554443 3346789999985 778899999998 99998866554 6999864 46899999977765555
Q ss_pred HHh
Q 011147 266 VKC 268 (492)
Q Consensus 266 vk~ 268 (492)
.+.
T Consensus 510 ~~~ 512 (527)
T 3pc3_A 510 AAG 512 (527)
T ss_dssp HTC
T ss_pred Hhc
Confidence 443
No 124
>2d4z_A Chloride channel protein; CLC chloride channel cytoplasmic domain, CBS domains, ION CH regulatory subunit, transport protein; 3.10A {Torpedo marmorata} SCOP: d.37.1.1
Probab=93.94 E-value=0.033 Score=54.07 Aligned_cols=52 Identities=19% Similarity=0.161 Sum_probs=44.6
Q ss_pred cccccCcceEEEeCCCChHHHHHHHHHHcCCccceEEeCCCCceEEEEEccchHHHH
Q 011147 209 DAMTAMSKIFSLDINSRLDEKTMGLIISNGHSRVPIYVGTPTNIIGAILGHSHMAVV 265 (492)
Q Consensus 209 diMtPr~~v~~l~~~~tl~~e~~~~i~~~~~SRiPV~~~~~d~IvGiv~~~d~m~~v 265 (492)
.+|.| ..+++..++++. ++..++...|..++||.+. +.+||||..+|+++++
T Consensus 193 ~~md~--sP~tv~~~tsL~-~v~~LF~~lglr~l~V~~~--GrLVGIVTrkDl~kai 244 (250)
T 2d4z_A 193 CRIDQ--SPFQLVEGTSLQ-KTHTLFSLLGLDRAYVTSM--GKLVGVVALAEIQAAI 244 (250)
T ss_dssp SCEEC--CSCCBCTTCBHH-HHHHHHHHHTCSEEEEEET--TEEEEEEEHHHHHHHH
T ss_pred ccccC--CCeEECCCCcHH-HHHHHHHHhCCeEEEEEEC--CEEEEEEEHHHHHHHH
Confidence 46886 668999999998 9999999999999999974 7999999977765544
No 125
>1zfj_A Inosine monophosphate dehydrogenase; IMPDH, CBS domains, oxidoreductase; HET: IMP; 1.90A {Streptococcus pyogenes} SCOP: c.1.5.1 d.37.1.1
Probab=93.93 E-value=0.054 Score=57.30 Aligned_cols=61 Identities=11% Similarity=0.214 Sum_probs=50.7
Q ss_pred cccccccccccCcceEEEeCCCChHHHHHHHHHHcCCccceEEeCCCCceEEEEEccchHHHHH
Q 011147 203 TQKTAKDAMTAMSKIFSLDINSRLDEKTMGLIISNGHSRVPIYVGTPTNIIGAILGHSHMAVVV 266 (492)
Q Consensus 203 ~~~~V~diMtPr~~v~~l~~~~tl~~e~~~~i~~~~~SRiPV~~~~~d~IvGiv~~~d~m~~vv 266 (492)
.+.+++++|++ .++++++.++++. ++++.+.+++..++||+++ .++++|++..+|+++.+.
T Consensus 150 ~~~~v~~im~~-~~~~~v~~~~~l~-~a~~~m~~~~~~~lpVVd~-~g~lvGivt~~Dil~~~~ 210 (491)
T 1zfj_A 150 YNAPISEHMTS-EHLVTAAVGTDLE-TAERILHEHRIEKLPLVDN-SGRLSGLITIKDIEKVIE 210 (491)
T ss_dssp SSSBTTTSCCC-SCCCCEETTCCHH-HHHHHHHHTTCSEEEEECT-TSBEEEEEEHHHHHHHHH
T ss_pred CCCcHHHHcCC-CCCEEECCCCCHH-HHHHHHHHcCCCEEEEEcC-CCcEEEEEEHHHHHHHHh
Confidence 56789999985 2567899999998 9999999999999999975 478999999766554443
No 126
>1jcn_A Inosine monophosphate dehydrogenase I; IMPD, IMPDH, guanine nucleotide synthesis, oxidoreductase; HET: CPR; 2.50A {Homo sapiens} SCOP: c.1.5.1 d.37.1.1 PDB: 1jr1_A* 1nf7_A* 1b3o_A* 1nfb_A*
Probab=93.45 E-value=0.013 Score=62.61 Aligned_cols=58 Identities=10% Similarity=0.151 Sum_probs=38.6
Q ss_pred cccccccccccCcceEEEeCCCChHHHHHHHHHHcCCccceEEeCCCCceEEEEEccchH
Q 011147 203 TQKTAKDAMTAMSKIFSLDINSRLDEKTMGLIISNGHSRVPIYVGTPTNIIGAILGHSHM 262 (492)
Q Consensus 203 ~~~~V~diMtPr~~v~~l~~~~tl~~e~~~~i~~~~~SRiPV~~~~~d~IvGiv~~~d~m 262 (492)
.+.+++++|+++.++.+++.++++. ++++.+.+++..++||+++ .++++|+|..+|++
T Consensus 171 ~~~~v~~vm~~~~~~~tv~~~~~l~-ea~~~m~~~~~~~lpVVd~-~g~lvGiIt~~Dll 228 (514)
T 1jcn_A 171 HTTLLSEVMTPRIELVVAPAGVTLK-EANEILQRSKKGKLPIVND-CDELVAIIARTDLK 228 (514)
T ss_dssp ----------CCBCCCCEETTCCST-TTTTHHHHHTCSCCCEESS-SSCCC----CCCCS
T ss_pred CCCCHHHHhCCCCCCeEECCCCCHH-HHHHHHHHcCCCcccEECC-CCeEEEEEEHHHHH
Confidence 4568999999866888999999998 9999999999999999974 47899999977764
No 127
>4af0_A Inosine-5'-monophosphate dehydrogenase; oxidoreductase, GTP biosynthesis, drug resistance; HET: MOA IMP; 2.20A {Cryptococcus neoformans} PDB: 4af0_B*
Probab=92.25 E-value=0.026 Score=60.54 Aligned_cols=55 Identities=15% Similarity=0.244 Sum_probs=0.0
Q ss_pred cccccccccccCcceEEEeCCCChHHHHHHHHHHcCCccceEEeCCCCceEEEEEccch
Q 011147 203 TQKTAKDAMTAMSKIFSLDINSRLDEKTMGLIISNGHSRVPIYVGTPTNIIGAILGHSH 261 (492)
Q Consensus 203 ~~~~V~diMtPr~~v~~l~~~~tl~~e~~~~i~~~~~SRiPV~~~~~d~IvGiv~~~d~ 261 (492)
.+.+|+|+||+ ++++++.+.+++ |+.+++.+++..++||+++ .++++|+|..+|+
T Consensus 198 ~~~~V~evMT~--~lvt~~~~~~le-eA~~iL~~~kieklpVVd~-~g~LvGlIT~kDi 252 (556)
T 4af0_A 198 AETPIKSVMTT--EVVTGSSPITLE-KANSLLRETKKGKLPIVDS-NGHLVSLVARSDL 252 (556)
T ss_dssp -----------------------------------------------------------
T ss_pred cceEhhhhccc--ceEEecCCCCHH-HHHHHHHHccccceeEEcc-CCcEEEEEEechh
Confidence 35789999996 689999999998 9999999999999999975 4789999995554
No 128
>2cu0_A Inosine-5'-monophosphate dehydrogenase; structural genomics, pyrococcus horikoshii OT3, riken structural genomics/PROT initiative, RSGI; HET: XMP; 2.10A {Pyrococcus horikoshii} SCOP: c.1.5.1
Probab=90.44 E-value=0.05 Score=57.71 Aligned_cols=57 Identities=19% Similarity=0.349 Sum_probs=0.0
Q ss_pred cccccccccccCcceEEEeCCCChHHHHHHHHHHcCCccceEEeCCCCceEEEEEccchHH
Q 011147 203 TQKTAKDAMTAMSKIFSLDINSRLDEKTMGLIISNGHSRVPIYVGTPTNIIGAILGHSHMA 263 (492)
Q Consensus 203 ~~~~V~diMtPr~~v~~l~~~~tl~~e~~~~i~~~~~SRiPV~~~~~d~IvGiv~~~d~m~ 263 (492)
.+.+++++|++ ++.+++.++++. ++++.+.+++..++||+++ .++++|+++.+|+++
T Consensus 148 ~~~~v~~im~~--~~~~v~~~~~l~-eal~~m~~~~~~~lpVVde-~g~lvGiiT~~Dil~ 204 (486)
T 2cu0_A 148 EGKLVKELMTK--EVITVPESIEVE-EALKIMIENRIDRLPVVDE-RGKLVGLITMSDLVA 204 (486)
T ss_dssp -------------------------------------------------------------
T ss_pred CCCCHHHHccC--CCeEECCcCcHH-HHHHHHHHcCCCEEEEEec-CCeEEEEEEHHHHHH
Confidence 35689999986 678899999998 9999999999999999974 478999999666543
No 129
>3ded_A Probable hemolysin; structural genomics, P protein structure initiative, midwest center for structural genomics, MCSG, membrane; HET: MSE; 2.14A {Chromobacterium violaceum} SCOP: d.145.1.4
Probab=82.86 E-value=0.1 Score=44.58 Aligned_cols=31 Identities=16% Similarity=0.115 Sum_probs=26.5
Q ss_pred CCC---cccccc-cccCCCCCCCCCCCCCcccCCC
Q 011147 410 SPG---AAFVSR-LRRTPMDSPIPSHHDQTPVSSY 440 (492)
Q Consensus 410 ~~~---~~~~~~-~~~~~~~~~~~~~~~~~~~~~~ 440 (492)
+|. +.|.|. ||.+..+|+||..||.+-+..|
T Consensus 58 l~~~~~~~~dTlgGlil~~lg~iP~~Gd~v~~~g~ 92 (113)
T 3ded_A 58 LPGEAGGNIHTLAGVMLYQLGRVPSVTDRFEWNGF 92 (113)
T ss_dssp CTTGGGTCCCBHHHHHHHHHCSSCCTTCEEEETTE
T ss_pred CCcccCCCCccHHHHHHHHhCCCCCCCCEEEECCE
Confidence 554 678899 9999999999999999877655
No 130
>2r2z_A Hemolysin; APC85144, enterococcus faecalis V583, STRU initiative, midwest center for structural genomics, MCSG; 1.20A {Enterococcus faecalis} SCOP: d.145.1.4
Probab=63.06 E-value=0.77 Score=37.26 Aligned_cols=31 Identities=6% Similarity=-0.056 Sum_probs=25.2
Q ss_pred CCCcccccc-cccCCCCCCCCCCCCCccc--CCC
Q 011147 410 SPGAAFVSR-LRRTPMDSPIPSHHDQTPV--SSY 440 (492)
Q Consensus 410 ~~~~~~~~~-~~~~~~~~~~~~~~~~~~~--~~~ 440 (492)
+|...|.|. ||.+..+|++|..||.+.+ ..|
T Consensus 37 l~~~~~~TlgG~i~~~lg~iP~~Gd~v~~~~~~~ 70 (93)
T 2r2z_A 37 LHMSDVDTMAGYLITALGTIPDEGEKPSFEVGNI 70 (93)
T ss_dssp CCCTTCCBHHHHHHHHHSSCCCTTCCCEEEETTE
T ss_pred CCCCCcccHHHHHHHHhCCCCCCCCEEEEecCCE
Confidence 455567788 9999999999999999855 554
No 131
>3lae_A UPF0053 protein HI0107; APC85784.2, conserved protein, haemophilus influenzae RD KW20, structural genomics, PSI-2; HET: MSE; 1.45A {Haemophilus influenzae} SCOP: d.145.1.4 PDB: 2o1r_A*
Probab=47.76 E-value=2.9 Score=32.99 Aligned_cols=28 Identities=7% Similarity=-0.122 Sum_probs=23.0
Q ss_pred cccccc-cccCCCCCCCCCCCCCcccCCC
Q 011147 413 AAFVSR-LRRTPMDSPIPSHHDQTPVSSY 440 (492)
Q Consensus 413 ~~~~~~-~~~~~~~~~~~~~~~~~~~~~~ 440 (492)
..|.|. |+....+|++|..||.+.+..|
T Consensus 33 ~~~~Tl~G~i~~~lg~iP~~Gd~v~~~~~ 61 (81)
T 3lae_A 33 EDARTFNGLILEHLEEIPDEGTICEIDGL 61 (81)
T ss_dssp SSCSBHHHHHHHHCSSCCCTTCEEEETTE
T ss_pred CCCccHHHHHHHHhCCCCCCCCEEEECCE
Confidence 345577 9999999999999999877655
No 132
>3llb_A Uncharacterized protein; protein PA3983, unknown function, structural genomics, PSI2, MCSG, protein structure initiative; 1.80A {Pseudomonas aeruginosa} SCOP: d.145.1.0
Probab=43.74 E-value=2.7 Score=33.33 Aligned_cols=28 Identities=7% Similarity=0.114 Sum_probs=23.1
Q ss_pred cccccc-cccCCCCCCCCCCCCCcccCCC
Q 011147 413 AAFVSR-LRRTPMDSPIPSHHDQTPVSSY 440 (492)
Q Consensus 413 ~~~~~~-~~~~~~~~~~~~~~~~~~~~~~ 440 (492)
..|.|. |+....+|++|..||.+-+..|
T Consensus 33 ~~~~Tl~G~i~~~lg~iP~~Gd~v~~~~~ 61 (83)
T 3llb_A 33 EEFDTVGGLVMSAFGHLPKRNEVVELGEF 61 (83)
T ss_dssp TTCSBHHHHHHHHHSSCCCTTCEEEETTE
T ss_pred CCCcCHHHHHHHHhCcCCCCCCEEEECCE
Confidence 445677 9999999999999999877655
No 133
>2jaf_A Halorhodopsin, HR; chromophore, chloride pump, ION transport, membrane, chloride, receptor, ION pump, transport, sensory transduction; HET: BOG PLM RET; 1.7A {Halobacterium salinarium} PDB: 2jag_A* 1e12_A*
Probab=38.85 E-value=2.6e+02 Score=26.93 Aligned_cols=39 Identities=10% Similarity=0.186 Sum_probs=24.5
Q ss_pred HHHhhhhHHHHHHHhhHHHHHHHhHHHHHHHHHHHHHHHHH
Q 011147 110 LAFGEIIPQAVCSRYGLSVGAKLSVLVRLIVIVLFPIAYPI 150 (492)
Q Consensus 110 lifGEiiPK~ia~~~~e~ia~~~a~~v~~~~~ll~Pi~~~i 150 (492)
.+|++. .|+...+ ..+-+....+.+-.+.|++||+.|.+
T Consensus 178 ~l~~~~-~~~a~~~-~v~~~f~~l~~~v~v~W~iYPI~w~l 216 (274)
T 2jaf_A 178 ALVTDW-AASASSA-GTAEIFDTLRVLVVVLWLGYPIVWAV 216 (274)
T ss_dssp HHHTHH-HHHHHHH-TCHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHH-HHHhhhh-HHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 344554 5555444 44445555566667788889999976
No 134
>2pli_A Uncharacterized protein; CORC-associated region, MCSG, PSI2, structural genomics, Pro structure initiative; 1.70A {Neisseria meningitidis} SCOP: d.145.1.4
Probab=36.63 E-value=4.2 Score=32.78 Aligned_cols=28 Identities=4% Similarity=-0.090 Sum_probs=22.7
Q ss_pred cccccc-cccCCCCCCCCCCCCCcccCCC
Q 011147 413 AAFVSR-LRRTPMDSPIPSHHDQTPVSSY 440 (492)
Q Consensus 413 ~~~~~~-~~~~~~~~~~~~~~~~~~~~~~ 440 (492)
..|.|. ||.+..+|++|..||.+.+.+|
T Consensus 42 ~~~dTlgG~i~~~lg~iP~~Ge~v~~~~~ 70 (91)
T 2pli_A 42 EEADTIGGLVIQELGHLPVRGEKVLIGGL 70 (91)
T ss_dssp SSCCBHHHHHHHHHSSCCCTTCEEEETTE
T ss_pred CCCccHHHHHHHHhCCCCCCCCEEEECCE
Confidence 345577 9999999999999999877654
No 135
>2p13_A CBS domain; alpha-beta structure, structural genomics, PSI-2, protein ST initiative, midwest center for structural genomics, MCSG; 1.65A {Nitrosomonas europaea} SCOP: d.145.1.4
Probab=33.09 E-value=5.1 Score=32.12 Aligned_cols=51 Identities=18% Similarity=0.183 Sum_probs=35.4
Q ss_pred cEEEEechhHHHHHHccCccCCcCccchhhhhhhhhccccccCCCCCCcccccc-cccCCCCCCCCCCCCCcccCCC
Q 011147 365 EVIGIITLEDVMEELLQEEILDETDDYVDVHRKIKINMLESQKSPSPGAAFVSR-LRRTPMDSPIPSHHDQTPVSSY 440 (492)
Q Consensus 365 ~vvGIITlEDViEeLlgeeI~DEtD~~~d~~~~irv~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~ 440 (492)
.+-|-++++|+-+.+ |-++.++. ..|.|. ||.+..+|++|..||.+.+.+|
T Consensus 18 ~v~G~~~l~dl~~~l-~~~l~~~~------------------------~~~~TlgG~i~~~lg~iP~~Gd~v~~~~~ 69 (90)
T 2p13_A 18 LMDGWISIRKASNLL-EHDLVDEA------------------------ERYSTLGGYLLWQFGYIPAAGEQITVDGL 69 (90)
T ss_dssp EEETTSBHHHHHHHH-TSCCCCTT------------------------CCCCBHHHHHHHHHSSCCCTTCEEEETTE
T ss_pred EEECcCCHHHHHHHH-CCCCCCcC------------------------CCCccHHHHHHHHhCCCCCCCCEEEECCE
Confidence 466778888875554 53332210 345577 9999999999999999877654
No 136
>2o3g_A Putative protein; APC85631.1, neisseria meningitid structural genomics, PSI-2, protein structure initiative; 2.55A {Neisseria meningitidis} SCOP: d.145.1.4
Probab=32.28 E-value=5.1 Score=32.27 Aligned_cols=28 Identities=18% Similarity=0.073 Sum_probs=23.2
Q ss_pred cccccc-cccCCCCCCCCCCCCCcccCCC
Q 011147 413 AAFVSR-LRRTPMDSPIPSHHDQTPVSSY 440 (492)
Q Consensus 413 ~~~~~~-~~~~~~~~~~~~~~~~~~~~~~ 440 (492)
..|.|. ||.+..+|+||..||.+.+.+|
T Consensus 43 ~~~~Tl~G~i~~~lg~iP~~Gd~v~~~~~ 71 (92)
T 2o3g_A 43 ADFHTVAGLIMEELQTIPDVGDFADFHGW 71 (92)
T ss_dssp CSCSBHHHHHHHHHTSCCCTTCEEEETTE
T ss_pred CCcccHHHHHHHHhCCCCCCCCEEEECCE
Confidence 456687 9999999999999999877654
No 137
>2pls_A CBS domain protein; APC86064.2, CORC/HLYC transporter associated domain, CBS DOM protein, structural genomics, PSI-2 structure initiative; 2.15A {Chlorobium tepidum tls} SCOP: d.145.1.4
Probab=31.12 E-value=5.4 Score=31.67 Aligned_cols=52 Identities=13% Similarity=0.167 Sum_probs=35.9
Q ss_pred cEEEEechhHHHHHHccCc-cCCcCccchhhhhhhhhccccccCCCCCCcccccc-cccCCCCCCCCCCCCCcccCCC
Q 011147 365 EVIGIITLEDVMEELLQEE-ILDETDDYVDVHRKIKINMLESQKSPSPGAAFVSR-LRRTPMDSPIPSHHDQTPVSSY 440 (492)
Q Consensus 365 ~vvGIITlEDViEeLlgee-I~DEtD~~~d~~~~irv~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~ 440 (492)
.+-|-++++|+-+.+ |-+ +.++ | ...|.|. ||.+...|++|..||.+.+..|
T Consensus 12 ~v~G~~~l~dl~~~l-~~~~l~~~-~----------------------~~~~~Tl~G~i~~~lg~iP~~Gd~v~~~~~ 65 (86)
T 2pls_A 12 LLDGLIAVPELKDTL-GLRAVPEE-E----------------------KGVYHTLSGMIMWLLGRLPQTGDITFWENW 65 (86)
T ss_dssp EEETTCBHHHHHHHH-TCSCCTTT-T----------------------SCSCCBHHHHHHHHHTSCCCTTCEEEETTE
T ss_pred EEEcccCHHHHHHHh-CCCcCCCc-c----------------------CCCcccHHHHHHHHhCCCCCCCCEEEECCE
Confidence 466888899976555 533 3211 0 0245577 9999999999999999876654
No 138
>2rk5_A Putative hemolysin; structural genomics, PSI-2, MCSG, protein structure initiative, midwest center for structural genomics, membrane; 1.50A {Streptococcus mutans UA159} SCOP: d.145.1.4
Probab=29.04 E-value=5.2 Score=31.89 Aligned_cols=27 Identities=19% Similarity=0.022 Sum_probs=21.5
Q ss_pred cccccc-cccCCCCCCCCCCCC--CcccCC
Q 011147 413 AAFVSR-LRRTPMDSPIPSHHD--QTPVSS 439 (492)
Q Consensus 413 ~~~~~~-~~~~~~~~~~~~~~~--~~~~~~ 439 (492)
..|.|. |+.+..+|++|..|| .+.+..
T Consensus 32 ~~~dTl~G~v~~~lg~iP~~Gd~~~v~~~~ 61 (87)
T 2rk5_A 32 DNVDTIAGFYLTGVGTIPSQEEKEHFEVES 61 (87)
T ss_dssp TTCCBHHHHHHHHHCSCCCSSSCCEEEEEE
T ss_pred CCcccHHHHHHHHhCcCCCCCCcEEEEECC
Confidence 345677 999999999999999 766554
No 139
>2p4p_A Hypothetical protein HD1797; CORC_HLYC, PFAM: PF03471, structural GE PSI-2, protein structure initiative, midwest center for STR genomics; HET: MLY MSE; 1.80A {Haemophilus ducreyi} SCOP: d.145.1.4
Probab=29.03 E-value=6.5 Score=31.18 Aligned_cols=27 Identities=19% Similarity=0.112 Sum_probs=22.3
Q ss_pred ccccc-cccCCCCCCCCCCCCCcccCCC
Q 011147 414 AFVSR-LRRTPMDSPIPSHHDQTPVSSY 440 (492)
Q Consensus 414 ~~~~~-~~~~~~~~~~~~~~~~~~~~~~ 440 (492)
.|.|. ||.+..+|++|..||.+.+.+|
T Consensus 36 ~~~Tl~G~i~~~lg~iP~~Gd~v~~~~~ 63 (86)
T 2p4p_A 36 NYETIGGFMMYMLRXIPXXTDFVLYDXY 63 (86)
T ss_dssp SSCBHHHHHHHHHCSCCCTTCEEEETTE
T ss_pred CCccHHHHHHHHhCCCCCCCcEEEEeeE
Confidence 35577 9999999999999999877654
No 140
>2oai_A Hemolysin; PFAM03471, xylella fastidiosa temecula1, structur genomics, PSI-2, protein structure initiative, midwest CENT structural genomics; HET: MLY; 1.80A {Xylella fastidiosa} SCOP: d.145.1.4 PDB: 2r8d_A*
Probab=28.43 E-value=5.5 Score=32.29 Aligned_cols=52 Identities=15% Similarity=0.153 Sum_probs=34.4
Q ss_pred cEEEEechhHHHHHHccCccCCcCccchhhhhhhhhccccccCCCCCCcccccc-cccCCCCCCCCCCCCCcccCCC
Q 011147 365 EVIGIITLEDVMEELLQEEILDETDDYVDVHRKIKINMLESQKSPSPGAAFVSR-LRRTPMDSPIPSHHDQTPVSSY 440 (492)
Q Consensus 365 ~vvGIITlEDViEeLlgeeI~DEtD~~~d~~~~irv~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~ 440 (492)
.+-|-++++|+-+.+ |-++.++. ...|.|. ||.+..+|+||..||.+.+.+|
T Consensus 21 ~v~G~~~l~dl~~~l-~~~l~~~~-----------------------~~~~dTlgG~i~~~lg~iP~~Gd~v~~~~~ 73 (94)
T 2oai_A 21 LIDGTLPIEELREVL-GAELPDGE-----------------------ENNYHTLAGMCISYFGRIPHVGEYFDWAGW 73 (94)
T ss_dssp EEETTCBHHHHHHHH-TC------------------------------CCCSBHHHHHHHHHSSCCCTTCEEEETTE
T ss_pred EEeccCCHHHHHHHh-CCCCCccc-----------------------CCCCccHHHHHHHHhCCCCCCCCEEEECCE
Confidence 466888899976554 53332100 0235577 9999999999999999876654
No 141
>1tif_A IF3-N, translation initiation factor 3; IF3 N-terminal domain, ribosome binding factor; 1.80A {Geobacillus stearothermophilus} SCOP: d.15.8.1
Probab=26.22 E-value=59 Score=25.67 Aligned_cols=23 Identities=13% Similarity=0.254 Sum_probs=19.7
Q ss_pred eEEecccCCCCCCCcEEEEechhHHHHHH
Q 011147 351 ISKEELESLPSVDEEVIGIITLEDVMEEL 379 (492)
Q Consensus 351 ~lVv~~~~~pde~g~vvGIITlEDViEeL 379 (492)
+-++ |++|+-+||++..+.++--
T Consensus 16 Vrli------~~~Ge~lGv~~~~eAl~~A 38 (78)
T 1tif_A 16 VRLI------DQNGDQLGIKSKQEALEIA 38 (78)
T ss_dssp EEEE------CTTSCEEEEEEHHHHHHHH
T ss_pred EEEE------CCCCcCCCcccHHHHHHHH
Confidence 6677 7999999999999988654
No 142
>3qbg_A Halorhodopsin; membrane protein, ION pump, retinal, membrane; HET: RET BNG 22B; 1.80A {Natronomonas pharaonis} PDB: 3a7k_A* 3abw_A* 3qbi_A* 3qbk_A* 3qbl_A*
Probab=24.74 E-value=3.8e+02 Score=26.01 Aligned_cols=25 Identities=12% Similarity=0.248 Sum_probs=17.6
Q ss_pred HHHHHHhHHHHHHHHHHHHHHHHHH
Q 011147 127 SVGAKLSVLVRLIVIVLFPIAYPIS 151 (492)
Q Consensus 127 ~ia~~~a~~v~~~~~ll~Pi~~~is 151 (492)
+-+....+.+-++.|.+||+.|.++
T Consensus 208 ~~~f~~L~~~v~v~W~iYPI~w~l~ 232 (291)
T 3qbg_A 208 ADIFSTLKLLTVVMWLGYPIVWALG 232 (291)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHS
T ss_pred HHHHHHhHHHHHHHHHHHHHHHhhc
Confidence 3344455666777888999999775
No 143
>2p3h_A Uncharacterized CBS domain-containing protein; structural genomics, CORC_HLYC, PFAM03471, putative transpor protein; 1.80A {Corynebacterium glutamicum} SCOP: d.145.1.4
Probab=23.75 E-value=12 Score=31.00 Aligned_cols=47 Identities=13% Similarity=0.124 Sum_probs=34.0
Q ss_pred cEEEEechhHHHHHHccCccCCcCccchhhhhhhhhccccccCCCCCCcccccc-cccCCCCCCCCCCCCCcccC
Q 011147 365 EVIGIITLEDVMEELLQEEILDETDDYVDVHRKIKINMLESQKSPSPGAAFVSR-LRRTPMDSPIPSHHDQTPVS 438 (492)
Q Consensus 365 ~vvGIITlEDViEeLlgeeI~DEtD~~~d~~~~irv~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~ 438 (492)
.+-|-++++|+-+.+ |-++ |.+.|.|. ||.+..+|++|..||.+-+.
T Consensus 15 ~v~G~~~l~dl~~~l-g~~l--------------------------~~e~~dTlgGli~~~lg~iP~~Gd~v~~~ 62 (101)
T 2p3h_A 15 LIDGDTPLDEVERAI-GYEL--------------------------PEGDYETISGLLFDHANALLKTGDVIEIP 62 (101)
T ss_dssp EEETTCBHHHHHHHH-TSCC--------------------------CCSSCCBHHHHHHHHHCSCCCTTCEEEEE
T ss_pred EEEccCCHHHHHHHh-CCCC--------------------------CCCCCccHHHHHHHHhCCCCCCCCEEEEe
Confidence 466778888876554 5332 22345577 99999999999999988766
No 144
>2nqw_A CBS domain protein; PFAM03471, hemolysins, CBS domains, transporter associated D CORC_HLYC, structural genomics, PSI-2; 1.30A {Porphyromonas gingivalis} SCOP: d.145.1.4
Probab=23.53 E-value=8.6 Score=30.95 Aligned_cols=26 Identities=8% Similarity=0.034 Sum_probs=21.8
Q ss_pred cccc-cccCCCCCCCCCCCCCcccCCC
Q 011147 415 FVSR-LRRTPMDSPIPSHHDQTPVSSY 440 (492)
Q Consensus 415 ~~~~-~~~~~~~~~~~~~~~~~~~~~~ 440 (492)
|.|. |+.+..+|++|..||.+.+.+|
T Consensus 46 ~~TlgG~i~~~lg~iP~~Gd~v~~~~~ 72 (93)
T 2nqw_A 46 VDTLSGLFLEIKQELPHVGDTAVYEPF 72 (93)
T ss_dssp CSBHHHHHHHHHCSCCCTTCEEEETTE
T ss_pred cccHHHHHHHHhCcCCCCCCEEEECCE
Confidence 4577 9999999999999999877654
No 145
>1xio_A Anabaena sensory rhodopsin; signaling protein, photoreceptor; HET: RET PEE; 2.00A {Nostoc SP} SCOP: f.13.1.1
Probab=22.89 E-value=4e+02 Score=25.33 Aligned_cols=40 Identities=10% Similarity=0.047 Sum_probs=23.8
Q ss_pred HHHhhhhHHHHHHHhhH--HHHHHHhHHHHHHHHHHHHHHHHHH
Q 011147 110 LAFGEIIPQAVCSRYGL--SVGAKLSVLVRLIVIVLFPIAYPIS 151 (492)
Q Consensus 110 lifGEiiPK~ia~~~~e--~ia~~~a~~v~~~~~ll~Pi~~~is 151 (492)
.+|++. .|+. .+.+. +-+....+.+-.+.|.+||+.|.++
T Consensus 145 ~l~~~~-~~~a-~~~~~~v~~~f~~l~~~v~v~W~iYPI~w~l~ 186 (261)
T 1xio_A 145 GIWNPL-RAKT-RTQSSELANLYDKLVTYFTVLWIGYPIVWIIG 186 (261)
T ss_dssp HHHTHH-HHHH-TTSCHHHHHHHHHHHHHHHHHHHHHHHHHHHS
T ss_pred HHHHHH-HHHH-hcCCHHHHHHHHHHHHHHHHHHHHHHHHHHhh
Confidence 445554 5533 33332 3444455666777888899999664
No 146
>3ug9_A Archaeal-type opsin 1, archaeal-type opsin 2; microbialrhodopsin, seven-transmembrane, light-gated cation membrane protein; HET: RET OLA; 2.30A {Chlamydomonas reinhardtii}
Probab=22.01 E-value=4.5e+02 Score=26.14 Aligned_cols=25 Identities=12% Similarity=0.166 Sum_probs=17.5
Q ss_pred HHHHHHhHHHHHHHHHHHHHHHHHH
Q 011147 127 SVGAKLSVLVRLIVIVLFPIAYPIS 151 (492)
Q Consensus 127 ~ia~~~a~~v~~~~~ll~Pi~~~is 151 (492)
+-+....+.+-++.|.+||++|.++
T Consensus 225 ~~af~~Lr~~vlV~WaIYPIvW~Lg 249 (333)
T 3ug9_A 225 RQVVTGMAWLFFVSWGMFPILFILG 249 (333)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHS
T ss_pred HHHHHHHHHHHHHHHHHhhHHHeec
Confidence 3344455666777888999999774
No 147
>3arc_L Photosystem II reaction center protein L; PSII, membrane-protein complex, transmembrane alpha-helix, E transport, photosynthesis; HET: OEX CLA PHO BCR PL9 SQD LMG UNL LMT HTG DGD LHG HEM; 1.90A {Thermosynechococcus vulcanus} PDB: 1s5l_L* 3a0b_L* 3a0h_L* 2axt_L* 3bz1_L* 3bz2_L* 3kzi_L* 3prq_L* 3prr_L*
Probab=21.70 E-value=85 Score=21.02 Aligned_cols=19 Identities=21% Similarity=0.349 Sum_probs=12.5
Q ss_pred hHHHHHHHHHHHHHHHHHH
Q 011147 12 MFWVYLVICVGLVSFAGLM 30 (492)
Q Consensus 12 ~~w~~l~iil~Llllsgff 30 (492)
-+|-.+++.++-++||.+|
T Consensus 17 Ly~GLLlifvlavlFssyf 35 (37)
T 3arc_L 17 LYLGLLLILVLALLFSSYF 35 (37)
T ss_dssp HHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHhhhhc
Confidence 4566666666667777766
No 148
>1m0k_A BR, bacteriorhodopsin; ION pump, membrane protein, retinal protein, lipids, photore haloarchaea, 7-transmembrane, serpentine; HET: RET LI1 SQU; 1.43A {Halobacterium salinarum} SCOP: f.13.1.1 PDB: 1m0l_A* 1m0m_A* 2zfe_A* 2zzl_A* 1p8h_A* 1o0a_A* 1py6_A* 1r2n_A* 1ucq_A* 1vjm_A* 2ntu_A* 2ntw_A* 3har_A* 1c8r_A* 2wjk_A* 2wjl_A* 2i21_A* 1p8i_A* 1p8u_A* 3han_A* ...
Probab=20.04 E-value=5.1e+02 Score=24.61 Aligned_cols=23 Identities=17% Similarity=0.327 Sum_probs=16.1
Q ss_pred HHHHhHHHHHHHHHHHHHHHHHH
Q 011147 129 GAKLSVLVRLIVIVLFPIAYPIS 151 (492)
Q Consensus 129 a~~~a~~v~~~~~ll~Pi~~~is 151 (492)
+....+.+-.+.|.+||+.|.++
T Consensus 183 ~f~~l~~~v~v~W~iYPi~w~l~ 205 (262)
T 1m0k_A 183 TFKVLRNVTVVLWSAYPVVWLIG 205 (262)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHS
T ss_pred HHHHHHHHHHHHHHHHHHHHHhh
Confidence 34444566677788899999765
Done!