Query 011150
Match_columns 492
No_of_seqs 192 out of 669
Neff 7.2
Searched_HMMs 29240
Date Mon Mar 25 21:50:33 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/011150.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/011150hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3fz4_A Putative arsenate reduc 30.5 17 0.00058 30.3 1.3 33 417-449 4-36 (120)
2 3l78_A Regulatory protein SPX; 28.7 20 0.0007 29.7 1.5 32 418-449 2-33 (120)
3 3f0i_A Arsenate reductase; str 28.2 33 0.0011 28.4 2.7 34 417-450 5-38 (119)
4 3rdw_A Putative arsenate reduc 27.1 35 0.0012 28.3 2.7 32 418-449 7-38 (121)
5 3gkx_A Putative ARSC family re 24.3 35 0.0012 28.3 2.1 32 418-449 6-37 (120)
6 2lqo_A Putative glutaredoxin R 24.0 22 0.00076 28.1 0.8 30 418-447 6-35 (92)
7 1rw1_A Conserved hypothetical 23.9 37 0.0013 27.7 2.2 33 418-450 2-34 (114)
8 1s3c_A Arsenate reductase; ARS 22.4 48 0.0016 28.3 2.7 33 418-450 4-36 (141)
9 2kok_A Arsenate reductase; bru 21.4 40 0.0014 27.7 2.0 32 418-449 7-38 (120)
10 1aba_A Glutaredoxin; electron 16.1 71 0.0024 24.1 2.2 30 419-448 3-36 (87)
No 1
>3fz4_A Putative arsenate reductase; APC61768, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.38A {Streptococcus mutans UA159} SCOP: c.47.1.0
Probab=30.51 E-value=17 Score=30.29 Aligned_cols=33 Identities=12% Similarity=0.054 Sum_probs=28.9
Q ss_pred hHhccCcchhHhHHHHHHHHHhcccceeeehhh
Q 011150 417 FAAITGEAYCSSARMTYELLKRNLLSAVFVETV 449 (492)
Q Consensus 417 ~iAi~G~~F~~SAk~a~~L~~rn~~~~~~~d~i 449 (492)
++-+||.+-|..+|+|.+++.++++.+-..|-.
T Consensus 4 Mi~iY~~~~C~~c~ka~~~L~~~gi~~~~~di~ 36 (120)
T 3fz4_A 4 MLTFYEYPKCSTCRRAKAELDDLAWDYDAIDIK 36 (120)
T ss_dssp SEEEEECSSCHHHHHHHHHHHHHTCCEEEEETT
T ss_pred eEEEEeCCCChHHHHHHHHHHHcCCceEEEEec
Confidence 567899999999999999999999998776543
No 2
>3l78_A Regulatory protein SPX; transcription, transcriptional factor, disulfide bond, redox-active center, transcription regulati; 1.90A {Streptococcus mutans} SCOP: c.47.1.12
Probab=28.69 E-value=20 Score=29.70 Aligned_cols=32 Identities=16% Similarity=0.130 Sum_probs=27.9
Q ss_pred HhccCcchhHhHHHHHHHHHhcccceeeehhh
Q 011150 418 AAITGEAYCSSARMTYELLKRNLLSAVFVETV 449 (492)
Q Consensus 418 iAi~G~~F~~SAk~a~~L~~rn~~~~~~~d~i 449 (492)
+-+||.+-|..+++|-+++.+++..+-..|-.
T Consensus 2 i~iY~~~~C~~c~ka~~~L~~~gi~~~~~di~ 33 (120)
T 3l78_A 2 VTLFLSPSCTSCRKARAWLNRHDVVFQEHNIM 33 (120)
T ss_dssp EEEEECSSCHHHHHHHHHHHHTTCCEEEEETT
T ss_pred EEEEeCCCCHHHHHHHHHHHHcCCCeEEEecc
Confidence 45899999999999999999999998776643
No 3
>3f0i_A Arsenate reductase; structural genomics, IDP01300, vibrio CH center for structural genomics of infectious diseases, CSGI oxidoreductase; HET: MSE; 1.88A {Vibrio cholerae}
Probab=28.25 E-value=33 Score=28.43 Aligned_cols=34 Identities=21% Similarity=0.299 Sum_probs=29.4
Q ss_pred hHhccCcchhHhHHHHHHHHHhcccceeeehhhh
Q 011150 417 FAAITGEAYCSSARMTYELLKRNLLSAVFVETVS 450 (492)
Q Consensus 417 ~iAi~G~~F~~SAk~a~~L~~rn~~~~~~~d~i~ 450 (492)
.+-+||.+-|..+|+|.+++.+++..+-..|-..
T Consensus 5 ~i~iY~~p~C~~c~ka~~~L~~~gi~~~~~di~~ 38 (119)
T 3f0i_A 5 SVVIYHNPKCSKSRETLALLENQGIAPQVIKYLE 38 (119)
T ss_dssp CCEEECCTTCHHHHHHHHHHHHTTCCCEEECHHH
T ss_pred EEEEEECCCChHHHHHHHHHHHcCCceEEEEecc
Confidence 4679999999999999999999999988776443
No 4
>3rdw_A Putative arsenate reductase; structural genomics, center for structural genomics of infec diseases, csgid, oxidoreductase; 2.20A {Yersinia pestis}
Probab=27.07 E-value=35 Score=28.34 Aligned_cols=32 Identities=22% Similarity=0.308 Sum_probs=28.2
Q ss_pred HhccCcchhHhHHHHHHHHHhcccceeeehhh
Q 011150 418 AAITGEAYCSSARMTYELLKRNLLSAVFVETV 449 (492)
Q Consensus 418 iAi~G~~F~~SAk~a~~L~~rn~~~~~~~d~i 449 (492)
+-|||.+-|..+|+|.+++.++++.+-..|-.
T Consensus 7 i~iY~~p~C~~c~ka~~~L~~~gi~~~~~di~ 38 (121)
T 3rdw_A 7 VTIYHNPRCSKSRETLALVEQQGITPQVVLYL 38 (121)
T ss_dssp CEEECCTTCHHHHHHHHHHHTTTCCCEEECTT
T ss_pred EEEEECCCCHHHHHHHHHHHHcCCCcEEEeec
Confidence 56999999999999999999999988776543
No 5
>3gkx_A Putative ARSC family related protein; ARSC family protein, structural genomi 2, protein structure initiative; 2.20A {Bacteroides fragilis} SCOP: c.47.1.0
Probab=24.27 E-value=35 Score=28.33 Aligned_cols=32 Identities=16% Similarity=0.076 Sum_probs=28.4
Q ss_pred HhccCcchhHhHHHHHHHHHhcccceeeehhh
Q 011150 418 AAITGEAYCSSARMTYELLKRNLLSAVFVETV 449 (492)
Q Consensus 418 iAi~G~~F~~SAk~a~~L~~rn~~~~~~~d~i 449 (492)
+-+||.+-|..+|+|.+++.++++.+-..|-.
T Consensus 6 i~iY~~p~C~~c~ka~~~L~~~gi~~~~~di~ 37 (120)
T 3gkx_A 6 TLFLQYPACSTCQKAKKWLIENNIEYTNRLIV 37 (120)
T ss_dssp CEEEECTTCHHHHHHHHHHHHTTCCCEEEETT
T ss_pred EEEEECCCChHHHHHHHHHHHcCCceEEEecc
Confidence 66899999999999999999999998877643
No 6
>2lqo_A Putative glutaredoxin RV3198.1/MT3292; TRX fold, oxidoreductase; NMR {Mycobacterium tuberculosis}
Probab=24.00 E-value=22 Score=28.09 Aligned_cols=30 Identities=17% Similarity=0.152 Sum_probs=24.3
Q ss_pred HhccCcchhHhHHHHHHHHHhcccceeeeh
Q 011150 418 AAITGEAYCSSARMTYELLKRNLLSAVFVE 447 (492)
Q Consensus 418 iAi~G~~F~~SAk~a~~L~~rn~~~~~~~d 447 (492)
|-+|+++.|.-+++|-+++.++++.....|
T Consensus 6 I~vYs~~~Cp~C~~aK~~L~~~gi~y~~id 35 (92)
T 2lqo_A 6 LTIYTTSWCGYCLRLKTALTANRIAYDEVD 35 (92)
T ss_dssp EEEEECTTCSSHHHHHHHHHHTTCCCEEEE
T ss_pred EEEEcCCCCHhHHHHHHHHHhcCCceEEEE
Confidence 457888888888888888999999887655
No 7
>1rw1_A Conserved hypothetical protein YFFB; thioredoxin fold, structure 2 function project, S2F, structu genomics, unknown function; HET: MSE IPA; 1.02A {Pseudomonas aeruginosa} SCOP: c.47.1.12
Probab=23.87 E-value=37 Score=27.70 Aligned_cols=33 Identities=12% Similarity=0.196 Sum_probs=28.1
Q ss_pred HhccCcchhHhHHHHHHHHHhcccceeeehhhh
Q 011150 418 AAITGEAYCSSARMTYELLKRNLLSAVFVETVS 450 (492)
Q Consensus 418 iAi~G~~F~~SAk~a~~L~~rn~~~~~~~d~i~ 450 (492)
+-+||.+-|..+++|-+++.++++..-..|-..
T Consensus 2 i~iY~~~~C~~C~kak~~L~~~gi~~~~~di~~ 34 (114)
T 1rw1_A 2 YVLYGIKACDTMKKARTWLDEHKVAYDFHDYKA 34 (114)
T ss_dssp EEEEECSSCHHHHHHHHHHHHTTCCEEEEEHHH
T ss_pred EEEEECCCChHHHHHHHHHHHCCCceEEEeecC
Confidence 348999999999999999999999987776543
No 8
>1s3c_A Arsenate reductase; ARSC, arsenite, oxidoreductase; 1.25A {Escherichia coli} PDB: 1sd9_A 1i9d_A 1j9b_A 1sd8_A 1jzw_A* 1sk1_A* 1sjz_A* 1sk0_A* 1sk2_A 1s3d_A
Probab=22.40 E-value=48 Score=28.34 Aligned_cols=33 Identities=12% Similarity=0.173 Sum_probs=28.8
Q ss_pred HhccCcchhHhHHHHHHHHHhcccceeeehhhh
Q 011150 418 AAITGEAYCSSARMTYELLKRNLLSAVFVETVS 450 (492)
Q Consensus 418 iAi~G~~F~~SAk~a~~L~~rn~~~~~~~d~i~ 450 (492)
+-+||.+-|..+|+|.+++.++++..-..|-..
T Consensus 4 itiY~~p~C~~crkak~~L~~~gi~~~~idi~~ 36 (141)
T 1s3c_A 4 ITIYHNPASGTSRNTLEMIRNSGTEPTIILYLE 36 (141)
T ss_dssp CEEECCTTCHHHHHHHHHHHHTTCCCEEECTTT
T ss_pred EEEEECCCChHHHHHHHHHHHcCCCEEEEECCC
Confidence 458999999999999999999999987776543
No 9
>2kok_A Arsenate reductase; brucellosis, zoonotic, oxidoreductase, S genomics, seattle structural genomics center for infectious ssgcid; NMR {Brucella abortus}
Probab=21.45 E-value=40 Score=27.73 Aligned_cols=32 Identities=16% Similarity=0.224 Sum_probs=28.3
Q ss_pred HhccCcchhHhHHHHHHHHHhcccceeeehhh
Q 011150 418 AAITGEAYCSSARMTYELLKRNLLSAVFVETV 449 (492)
Q Consensus 418 iAi~G~~F~~SAk~a~~L~~rn~~~~~~~d~i 449 (492)
+-+||.+.|..+++|.+++.++++..-..|-.
T Consensus 7 i~iY~~~~C~~C~ka~~~L~~~gi~y~~~di~ 38 (120)
T 2kok_A 7 VTIYGIKNCDTMKKARIWLEDHGIDYTFHDYK 38 (120)
T ss_dssp EEEEECSSCHHHHHHHHHHHHHTCCEEEEEHH
T ss_pred EEEEECCCChHHHHHHHHHHHcCCcEEEEeee
Confidence 56899999999999999999999998777644
No 10
>1aba_A Glutaredoxin; electron transport; HET: MES; 1.45A {Enterobacteria phage T4} SCOP: c.47.1.1 PDB: 1aaz_A 1de1_A 1de2_A
Probab=16.08 E-value=71 Score=24.06 Aligned_cols=30 Identities=17% Similarity=0.238 Sum_probs=22.6
Q ss_pred hccCcc----hhHhHHHHHHHHHhcccceeeehh
Q 011150 419 AITGEA----YCSSARMTYELLKRNLLSAVFVET 448 (492)
Q Consensus 419 Ai~G~~----F~~SAk~a~~L~~rn~~~~~~~d~ 448 (492)
-+|+++ .|.-+++|-+++.+++++.-..|-
T Consensus 3 ~iY~~~~~~~~Cp~C~~ak~~L~~~gi~y~~idI 36 (87)
T 1aba_A 3 KVYGYDSNIHKCGPCDNAKRLLTVKKQPFEFINI 36 (87)
T ss_dssp EEEECCTTTSCCHHHHHHHHHHHHTTCCEEEEES
T ss_pred EEEEeCCCCCcCccHHHHHHHHHHcCCCEEEEEe
Confidence 467777 788888888888898888766553
Done!