Query 011150
Match_columns 492
No_of_seqs 192 out of 669
Neff 7.2
Searched_HMMs 13730
Date Mon Mar 25 21:50:43 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/011150.a3m -d /work/01045/syshi/HHdatabase/scop70.hhm -o /work/01045/syshi/hhsearch_scop/011150hhsearch_scop -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 d1z3ea1 c.47.1.12 (A:1-114) Re 26.3 12 0.00085 28.9 1.6 33 418-450 2-34 (114)
2 d1rw1a_ c.47.1.12 (A:) Hypothe 25.1 16 0.0012 28.0 2.2 33 419-451 3-35 (114)
3 d1j9ba_ c.47.1.12 (A:) Arsenat 16.7 36 0.0026 26.9 2.7 32 419-450 3-34 (138)
4 d1nm3a1 c.47.1.1 (A:166-239) C 16.5 28 0.0021 24.0 1.8 29 419-447 8-36 (74)
5 d1r7ha_ c.47.1.1 (A:) Glutared 15.1 37 0.0027 23.3 2.1 30 419-448 4-33 (74)
6 d1h75a_ c.47.1.1 (A:) Glutared 13.4 44 0.0032 23.1 2.1 30 419-448 4-33 (76)
7 d1fova_ c.47.1.1 (A:) Glutared 10.3 44 0.0032 23.4 1.3 30 419-448 4-33 (82)
8 d1egoa_ c.47.1.1 (A:) Glutared 9.1 53 0.0039 23.1 1.3 22 419-440 4-25 (85)
9 d2fcra_ c.23.5.1 (A:) Flavodox 6.8 1.1E+02 0.0079 24.8 2.4 24 421-444 98-121 (173)
10 d1v54d_ f.23.1.1 (D:) Mitochon 6.1 2.5E+02 0.018 22.0 4.2 26 141-166 75-100 (144)
No 1
>d1z3ea1 c.47.1.12 (A:1-114) Regulatory protein Spx {Bacillus subtilis [TaxId: 1423]}
Probab=26.27 E-value=12 Score=28.92 Aligned_cols=33 Identities=18% Similarity=0.216 Sum_probs=28.6
Q ss_pred HhccCcchhHhHHHHHHHHHhcccceeeehhhh
Q 011150 418 AAITGEAYCSSARMTYELLKRNLLSAVFVETVS 450 (492)
Q Consensus 418 iAi~G~~F~~SAk~a~~L~~rn~~~~~~~d~i~ 450 (492)
+-+||.+=|.++|+|.+.+..|+..+...|-.-
T Consensus 2 i~ly~~~~C~~~rka~~~L~~~~i~~~~~d~~~ 34 (114)
T d1z3ea1 2 VTLYTSPSCTSCRKARAWLEEHEIPFVERNIFS 34 (114)
T ss_dssp EEEEECTTCHHHHHHHHHHHHTTCCEEEEETTT
T ss_pred EEEEcCCCCHHHHHHHHHHHHCCCCeEEEeeec
Confidence 458999999999999999999999998876543
No 2
>d1rw1a_ c.47.1.12 (A:) Hypothetical protein PA3664 (YffB) {Pseudomonas aeruginosa [TaxId: 287]}
Probab=25.07 E-value=16 Score=28.03 Aligned_cols=33 Identities=12% Similarity=0.218 Sum_probs=29.1
Q ss_pred hccCcchhHhHHHHHHHHHhcccceeeehhhhh
Q 011150 419 AITGEAYCSSARMTYELLKRNLLSAVFVETVST 451 (492)
Q Consensus 419 Ai~G~~F~~SAk~a~~L~~rn~~~~~~~d~i~~ 451 (492)
-+||.+=|.++|+|.+.+..|+..+-+.|-+-+
T Consensus 3 ~iY~~p~Cs~srka~~~L~~~~i~~~~idy~k~ 35 (114)
T d1rw1a_ 3 VLYGIKACDTMKKARTWLDEHKVAYDFHDYKAV 35 (114)
T ss_dssp EEEECSSCHHHHHHHHHHHHTTCCEEEEEHHHH
T ss_pred EEEECCCChHHHHHHHHHHHcCCCeEEEEcccc
Confidence 379999999999999999999999998875543
No 3
>d1j9ba_ c.47.1.12 (A:) Arsenate reductase ArsC {Escherichia coli [TaxId: 562]}
Probab=16.72 E-value=36 Score=26.94 Aligned_cols=32 Identities=16% Similarity=0.305 Sum_probs=28.2
Q ss_pred hccCcchhHhHHHHHHHHHhcccceeeehhhh
Q 011150 419 AITGEAYCSSARMTYELLKRNLLSAVFVETVS 450 (492)
Q Consensus 419 Ai~G~~F~~SAk~a~~L~~rn~~~~~~~d~i~ 450 (492)
-+||.+=|..+|+|.++++.++..+-+.|-+-
T Consensus 3 ~iY~~p~Cs~srkal~~L~~~~i~~~~idy~k 34 (138)
T d1j9ba_ 3 TIYHNPACGTSRNTLEMIRNSGTEPTIILYLE 34 (138)
T ss_dssp EEECCTTCHHHHHHHHHHHHTTCCCEEECTTT
T ss_pred EEEECCCCHHHHHHHHHHHHCCCCeEEEeecc
Confidence 47899999999999999999999998877544
No 4
>d1nm3a1 c.47.1.1 (A:166-239) C-terminal, Grx domain of Hybrid-Prx5 {Haemophilus influenzae [TaxId: 727]}
Probab=16.52 E-value=28 Score=24.01 Aligned_cols=29 Identities=21% Similarity=0.120 Sum_probs=20.9
Q ss_pred hccCcchhHhHHHHHHHHHhcccceeeeh
Q 011150 419 AITGEAYCSSARMTYELLKRNLLSAVFVE 447 (492)
Q Consensus 419 Ai~G~~F~~SAk~a~~L~~rn~~~~~~~d 447 (492)
-||+++.|.=+++|-+++.++++.....+
T Consensus 8 ~iYs~~~C~~C~~ak~lL~~~~i~~~~~~ 36 (74)
T d1nm3a1 8 SIFTKPGCPFCAKAKQLLHDKGLSFEEII 36 (74)
T ss_dssp EEEECSSCHHHHHHHHHHHHHTCCCEEEE
T ss_pred EEEECCCCHHHHHHHHHHHHcCCCeEEEE
Confidence 46666777777777778888888776554
No 5
>d1r7ha_ c.47.1.1 (A:) Glutaredoxin-like NRDH-redoxin {Corynebacterium ammoniagenes [TaxId: 1697]}
Probab=15.07 E-value=37 Score=23.25 Aligned_cols=30 Identities=20% Similarity=0.212 Sum_probs=23.6
Q ss_pred hccCcchhHhHHHHHHHHHhcccceeeehh
Q 011150 419 AITGEAYCSSARMTYELLKRNLLSAVFVET 448 (492)
Q Consensus 419 Ai~G~~F~~SAk~a~~L~~rn~~~~~~~d~ 448 (492)
-+|+++.|.=++++-++++++++.....|-
T Consensus 4 ~iYt~~~C~~C~~ak~~L~~~~i~~~~~~i 33 (74)
T d1r7ha_ 4 TLYTKPACVQCTATKKALDRAGLAYNTVDI 33 (74)
T ss_dssp EEEECTTCHHHHHHHHHHHHTTCCCEEEET
T ss_pred EEEeCCCChhHHHHHHHHHHcCCceEEEEc
Confidence 467788888888888889999998876543
No 6
>d1h75a_ c.47.1.1 (A:) Glutaredoxin-like NRDH-redoxin {Escherichia coli [TaxId: 562]}
Probab=13.42 E-value=44 Score=23.10 Aligned_cols=30 Identities=10% Similarity=0.154 Sum_probs=23.6
Q ss_pred hccCcchhHhHHHHHHHHHhcccceeeehh
Q 011150 419 AITGEAYCSSARMTYELLKRNLLSAVFVET 448 (492)
Q Consensus 419 Ai~G~~F~~SAk~a~~L~~rn~~~~~~~d~ 448 (492)
-+|+++.|.-++++-+++.++++.....|-
T Consensus 4 ~iYs~~~C~~C~~ak~~L~~~~i~y~~~~i 33 (76)
T d1h75a_ 4 TIYTRNDCVQCHATKRAMENRGFDFEMINV 33 (76)
T ss_dssp EEEECTTCHHHHHHHHHHHHTTCCCEEEET
T ss_pred EEEeCCCCccHHHHHHHHHhcCceeEEEee
Confidence 467777788888888889999998877654
No 7
>d1fova_ c.47.1.1 (A:) Glutaredoxin (Grx, thioltransferase) {Escherichia coli, Grx3 [TaxId: 562]}
Probab=10.33 E-value=44 Score=23.36 Aligned_cols=30 Identities=17% Similarity=0.108 Sum_probs=21.0
Q ss_pred hccCcchhHhHHHHHHHHHhcccceeeehh
Q 011150 419 AITGEAYCSSARMTYELLKRNLLSAVFVET 448 (492)
Q Consensus 419 Ai~G~~F~~SAk~a~~L~~rn~~~~~~~d~ 448 (492)
-||+++.|.=++++-+++.++++.....|-
T Consensus 4 ~iys~~~Cp~C~~ak~~L~~~~i~y~~~di 33 (82)
T d1fova_ 4 EIYTKETCPYCHRAKALLSSKGVSFQELPI 33 (82)
T ss_dssp EEEECSSCHHHHHHHHHHHHHTCCCEEEEC
T ss_pred EEEeCCCCHhHHHHHHHHHHcCCCeEEEec
Confidence 456666666666777778888888776543
No 8
>d1egoa_ c.47.1.1 (A:) Glutaredoxin (Grx, thioltransferase) {Escherichia coli [TaxId: 562]}
Probab=9.08 E-value=53 Score=23.14 Aligned_cols=22 Identities=18% Similarity=0.238 Sum_probs=15.3
Q ss_pred hccCcchhHhHHHHHHHHHhcc
Q 011150 419 AITGEAYCSSARMTYELLKRNL 440 (492)
Q Consensus 419 Ai~G~~F~~SAk~a~~L~~rn~ 440 (492)
-||+++.|+=+++|-+|+.+++
T Consensus 4 viysk~~Cp~C~~aK~ll~~~~ 25 (85)
T d1egoa_ 4 VIFGRSGCPYCVRAKDLAEKLS 25 (85)
T ss_dssp EEECCTTSTHHHHHHHHHHHHH
T ss_pred EEEeCCCCHhHHHHHHHHHHcC
Confidence 4677777777777777777754
No 9
>d2fcra_ c.23.5.1 (A:) Flavodoxin {Chondrus crispus [TaxId: 2769]}
Probab=6.79 E-value=1.1e+02 Score=24.75 Aligned_cols=24 Identities=8% Similarity=0.228 Sum_probs=21.1
Q ss_pred cCcchhHhHHHHHHHHHhccccee
Q 011150 421 TGEAYCSSARMTYELLKRNLLSAV 444 (492)
Q Consensus 421 ~G~~F~~SAk~a~~L~~rn~~~~~ 444 (492)
|++.||.|+++-.+.++++|...+
T Consensus 98 y~~~F~~a~~~l~~~l~~~GA~~I 121 (173)
T d2fcra_ 98 YPDNFCDAIEEIHDCFAKQGAKPV 121 (173)
T ss_dssp CTTSTTTHHHHHHHHHHHTTCEEE
T ss_pred chhhHHHHHHHHHHHHHhCCCEEe
Confidence 568899999999999999988765
No 10
>d1v54d_ f.23.1.1 (D:) Mitochondrial cytochrome c oxidase subunit IV {Cow (Bos taurus) [TaxId: 9913]}
Probab=6.10 E-value=2.5e+02 Score=22.05 Aligned_cols=26 Identities=27% Similarity=0.316 Sum_probs=17.2
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhh
Q 011150 141 IWVLVITLILSVPICFLLLLLLKHYT 166 (492)
Q Consensus 141 ~~~i~~~~~is~~ls~~~l~llr~~a 166 (492)
|..++++.++.+.++++...++|.++
T Consensus 75 wK~v~g~~~~~i~~s~~i~~~~r~~v 100 (144)
T d1v54d_ 75 WKTVVGAAMFFIGFTALLLIWEKHYV 100 (144)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHT
T ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHc
Confidence 56666666676777777766666643
Done!