Query 011152
Match_columns 492
No_of_seqs 233 out of 818
Neff 6.3
Searched_HMMs 46136
Date Fri Mar 29 08:41:57 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/011152.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/011152hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 KOG1021 Acetylglucosaminyltran 100.0 1.8E-64 3.9E-69 539.8 20.8 364 102-474 69-460 (464)
2 PF03016 Exostosin: Exostosin 100.0 3.6E-54 7.9E-59 432.7 22.0 289 110-427 5-302 (302)
3 KOG2264 Exostosin EXT1L [Signa 99.9 6.2E-25 1.3E-29 229.4 17.3 313 125-470 175-527 (907)
4 KOG1022 Acetylglucosaminyltran 99.6 2.9E-15 6.2E-20 157.1 11.9 237 179-443 135-386 (691)
5 cd03814 GT1_like_2 This family 96.3 0.032 7E-07 55.6 10.7 94 350-448 258-352 (364)
6 PF00852 Glyco_transf_10: Glyc 96.3 0.0071 1.5E-07 63.3 6.1 139 277-428 142-296 (349)
7 cd03820 GT1_amsD_like This fam 95.5 0.03 6.6E-07 54.8 6.3 94 350-448 244-339 (348)
8 cd03801 GT1_YqgM_like This fam 95.4 0.03 6.6E-07 54.9 6.2 93 350-448 267-362 (374)
9 PF00534 Glycos_transf_1: Glyc 95.3 0.017 3.8E-07 52.6 3.7 86 350-441 84-171 (172)
10 cd03822 GT1_ecORF704_like This 94.9 0.053 1.1E-06 54.2 6.2 92 350-448 259-354 (366)
11 PLN02871 UDP-sulfoquinovose:DA 94.9 0.2 4.3E-06 54.0 11.0 95 350-449 323-421 (465)
12 cd03794 GT1_wbuB_like This fam 94.7 0.062 1.3E-06 53.5 6.2 93 350-448 286-386 (394)
13 cd03818 GT1_ExpC_like This fam 94.6 0.28 6E-06 51.3 10.9 94 350-448 292-387 (396)
14 cd03806 GT1_ALG11_like This fa 94.2 0.46 1E-05 50.7 11.7 95 350-449 316-414 (419)
15 cd03819 GT1_WavL_like This fam 94.1 0.13 2.9E-06 51.7 7.2 93 350-448 255-352 (355)
16 TIGR03088 stp2 sugar transfera 94.1 0.5 1.1E-05 48.6 11.5 94 350-448 264-359 (374)
17 cd03808 GT1_cap1E_like This fa 93.6 0.16 3.4E-06 50.0 6.4 92 350-447 255-349 (359)
18 PRK09814 beta-1,6-galactofuran 93.3 0.11 2.4E-06 53.5 5.0 89 350-447 218-317 (333)
19 cd04962 GT1_like_5 This family 93.2 0.21 4.5E-06 50.9 6.8 94 350-448 262-357 (371)
20 cd05844 GT1_like_7 Glycosyltra 93.2 0.84 1.8E-05 46.3 11.2 94 350-448 256-357 (367)
21 cd03800 GT1_Sucrose_synthase T 93.1 0.15 3.3E-06 52.2 5.6 93 351-448 295-389 (398)
22 PRK15427 colanic acid biosynth 93.0 1.5 3.3E-05 46.5 13.3 92 350-448 290-392 (406)
23 cd03823 GT1_ExpE7_like This fa 92.8 0.27 5.7E-06 48.8 6.8 89 350-443 254-344 (359)
24 cd03809 GT1_mtfB_like This fam 92.8 0.16 3.4E-06 50.8 5.2 92 350-449 264-357 (365)
25 TIGR03449 mycothiol_MshA UDP-N 92.7 0.3 6.5E-06 50.9 7.1 95 350-449 294-389 (405)
26 cd03821 GT1_Bme6_like This fam 92.1 0.34 7.3E-06 48.0 6.4 91 351-448 274-366 (375)
27 cd03798 GT1_wlbH_like This fam 91.7 0.44 9.6E-06 46.9 6.7 93 350-448 270-363 (377)
28 cd04951 GT1_WbdM_like This fam 91.4 1.7 3.8E-05 43.5 10.8 92 351-448 255-347 (360)
29 cd03792 GT1_Trehalose_phosphor 90.8 3.5 7.5E-05 42.6 12.6 94 350-449 265-359 (372)
30 TIGR02149 glgA_Coryne glycogen 90.6 0.8 1.7E-05 47.1 7.6 94 350-448 272-373 (388)
31 PF13524 Glyco_trans_1_2: Glyc 89.7 1.2 2.6E-05 36.6 6.5 80 362-448 2-83 (92)
32 cd03807 GT1_WbnK_like This fam 89.5 0.74 1.6E-05 45.4 6.1 92 350-448 260-353 (365)
33 PRK10307 putative glycosyl tra 89.5 1.3 2.8E-05 46.5 8.2 94 350-449 295-395 (412)
34 PLN02949 transferase, transfer 89.3 4.6 9.9E-05 44.0 12.5 95 350-448 346-443 (463)
35 cd03816 GT1_ALG1_like This fam 89.1 2.4 5.1E-05 45.1 9.9 122 307-443 270-399 (415)
36 PRK09922 UDP-D-galactose:(gluc 89.0 3.2 7E-05 42.8 10.6 92 351-444 250-342 (359)
37 PRK15484 lipopolysaccharide 1, 88.8 3.1 6.7E-05 43.6 10.4 94 350-449 268-365 (380)
38 cd04949 GT1_gtfA_like This fam 88.8 0.74 1.6E-05 47.2 5.7 95 350-448 270-365 (372)
39 cd03804 GT1_wbaZ_like This fam 87.9 1.2 2.7E-05 45.2 6.7 63 350-416 253-315 (351)
40 cd03817 GT1_UGDG_like This fam 87.7 2.3 5E-05 42.1 8.3 92 350-447 270-362 (374)
41 cd04955 GT1_like_6 This family 87.7 3.4 7.4E-05 41.5 9.6 90 350-448 259-351 (363)
42 cd03805 GT1_ALG2_like This fam 87.6 1.1 2.5E-05 46.0 6.2 92 351-448 292-385 (392)
43 cd03811 GT1_WabH_like This fam 86.3 2.3 4.9E-05 41.5 7.2 92 351-445 256-350 (353)
44 cd03802 GT1_AviGT4_like This f 85.8 1.6 3.5E-05 43.4 6.0 42 351-393 236-278 (335)
45 TIGR02095 glgA glycogen/starch 85.6 3.9 8.4E-05 44.1 9.2 94 351-448 358-459 (473)
46 KOG2619 Fucosyltransferase [Ca 85.2 5.8 0.00013 42.1 9.9 148 277-434 163-323 (372)
47 TIGR03087 stp1 sugar transfera 84.3 3.2 6.9E-05 43.4 7.6 91 351-449 290-384 (397)
48 PF13692 Glyco_trans_1_4: Glyc 84.3 0.73 1.6E-05 40.0 2.4 60 350-414 62-122 (135)
49 cd03795 GT1_like_4 This family 83.5 2.7 5.8E-05 42.1 6.4 95 350-448 255-353 (357)
50 cd03813 GT1_like_3 This family 83.5 4 8.6E-05 44.2 8.2 90 350-444 362-458 (475)
51 PRK00654 glgA glycogen synthas 83.4 6.9 0.00015 42.2 10.0 93 352-448 350-449 (466)
52 cd03825 GT1_wcfI_like This fam 83.3 3.8 8.1E-05 41.2 7.4 92 351-447 257-350 (365)
53 cd03799 GT1_amsK_like This is 83.0 3 6.6E-05 41.7 6.6 94 350-448 247-348 (355)
54 TIGR02472 sucr_P_syn_N sucrose 81.8 2.2 4.7E-05 45.7 5.3 85 360-449 342-428 (439)
55 PRK14098 glycogen synthase; Pr 81.6 9 0.00019 42.0 10.0 95 351-449 374-473 (489)
56 cd03812 GT1_CapH_like This fam 81.1 9.3 0.0002 38.3 9.4 41 350-391 258-298 (358)
57 PRK14099 glycogen synthase; Pr 80.7 3.8 8.3E-05 44.8 6.8 92 351-449 361-466 (485)
58 PHA01630 putative group 1 glyc 80.0 3.9 8.4E-05 42.4 6.2 41 350-391 201-241 (331)
59 cd03796 GT1_PIG-A_like This fa 79.4 5.9 0.00013 41.4 7.5 94 350-449 261-355 (398)
60 cd04946 GT1_AmsK_like This fam 79.3 6.2 0.00013 41.8 7.7 92 351-447 301-397 (407)
61 cd03793 GT1_Glycogen_synthase_ 78.6 2.7 5.9E-05 47.0 4.7 111 350-462 466-588 (590)
62 PRK15490 Vi polysaccharide bio 77.0 14 0.0003 41.5 9.7 61 351-414 465-525 (578)
63 cd03791 GT1_Glycogen_synthase_ 74.5 17 0.00036 39.0 9.4 87 352-440 364-457 (476)
64 PHA01633 putative glycosyl tra 74.2 4.9 0.00011 42.0 5.1 42 350-392 215-256 (335)
65 TIGR02468 sucrsPsyn_pln sucros 70.8 9.5 0.00021 45.6 6.8 84 361-449 574-658 (1050)
66 PRK13608 diacylglycerol glucos 67.4 35 0.00075 35.9 9.7 84 351-445 266-355 (391)
67 PRK05749 3-deoxy-D-manno-octul 65.9 14 0.0003 39.1 6.4 107 351-471 312-423 (425)
68 KOG1387 Glycosyltransferase [C 64.8 49 0.0011 35.1 9.7 91 350-446 348-443 (465)
69 PLN00142 sucrose synthase 64.2 33 0.00071 40.2 9.3 88 359-449 667-758 (815)
70 PLN02939 transferase, transfer 63.2 26 0.00057 41.6 8.4 92 354-449 852-954 (977)
71 TIGR01133 murG undecaprenyldip 62.9 11 0.00024 38.1 4.9 84 351-441 243-334 (348)
72 TIGR02918 accessory Sec system 62.0 84 0.0018 34.6 11.8 92 351-448 385-486 (500)
73 COG4128 Zot Zonula occludens t 57.1 9.3 0.0002 39.5 3.0 31 2-32 216-246 (398)
74 PRK00726 murG undecaprenyldiph 57.0 19 0.00042 36.8 5.5 101 351-468 245-354 (357)
75 cd03788 GT1_TPS Trehalose-6-Ph 50.3 23 0.00049 38.5 4.9 91 349-445 351-445 (460)
76 TIGR02470 sucr_synth sucrose s 47.9 1E+02 0.0022 36.2 9.7 88 359-449 644-735 (784)
77 cd04950 GT1_like_1 Glycosyltra 46.5 22 0.00047 37.0 3.9 40 350-390 265-309 (373)
78 TIGR02400 trehalose_OtsA alpha 46.3 56 0.0012 35.6 7.1 90 349-445 346-440 (456)
79 PF07172 GRP: Glycine rich pro 46.3 17 0.00036 31.2 2.4 19 8-26 3-21 (95)
80 cd01635 Glycosyltransferase_GT 45.7 22 0.00048 32.4 3.4 40 351-391 174-213 (229)
81 PLN02316 synthase/transferase 45.2 50 0.0011 39.8 6.9 37 354-390 915-951 (1036)
82 PLN02605 monogalactosyldiacylg 42.3 1.2E+02 0.0025 31.7 8.6 80 351-441 275-361 (382)
83 TIGR03590 PseG pseudaminic aci 42.0 61 0.0013 32.6 6.2 34 350-389 233-266 (279)
84 COG0438 RfaG Glycosyltransfera 38.2 78 0.0017 30.0 6.1 42 350-392 268-309 (381)
85 smart00672 CAP10 Putative lipo 37.3 3.4E+02 0.0073 27.2 10.6 136 301-445 79-231 (256)
86 PHA02291 hypothetical protein 35.2 58 0.0013 28.6 4.0 25 8-32 3-27 (132)
87 PRK10125 putative glycosyl tra 33.3 1.3E+02 0.0028 32.0 7.3 63 350-416 298-360 (405)
88 cd03785 GT1_MurG MurG is an N- 31.7 64 0.0014 32.6 4.5 84 350-441 244-337 (350)
89 PRK15179 Vi polysaccharide bio 28.7 2.4E+02 0.0053 32.6 8.9 93 351-448 584-680 (694)
90 PLN02275 transferase, transfer 28.5 1.8E+02 0.0039 30.1 7.3 76 306-391 261-341 (371)
91 PF05366 Sarcolipin: Sarcolipi 28.2 78 0.0017 21.1 2.8 23 8-30 4-26 (31)
92 TIGR00236 wecB UDP-N-acetylglu 27.1 4.8E+02 0.01 26.7 10.2 119 322-467 242-363 (365)
93 PF06024 DUF912: Nucleopolyhed 27.0 23 0.0005 30.5 0.2 26 12-37 68-93 (101)
94 PF13974 YebO: YebO-like prote 25.8 43 0.00094 27.9 1.6 21 15-35 3-23 (80)
95 PF12273 RCR: Chitin synthesis 24.1 70 0.0015 28.5 2.8 14 12-25 4-17 (130)
96 PRK00025 lpxB lipid-A-disaccha 23.2 1E+02 0.0022 31.7 4.2 103 351-468 254-374 (380)
97 PLN03063 alpha,alpha-trehalose 22.3 1.8E+02 0.004 34.1 6.5 90 350-445 367-461 (797)
98 COG3977 Alanine-alpha-ketoisov 21.7 1.2E+02 0.0026 31.7 4.2 97 374-480 202-336 (417)
99 PLN03194 putative disease resi 20.7 7.7E+02 0.017 23.8 9.9 142 304-472 26-180 (187)
No 1
>KOG1021 consensus Acetylglucosaminyltransferase EXT1/exostosin 1 [Carbohydrate transport and metabolism; Cell wall/membrane/envelope biogenesis; Extracellular structures]
Probab=100.00 E-value=1.8e-64 Score=539.85 Aligned_cols=364 Identities=34% Similarity=0.499 Sum_probs=299.3
Q ss_pred CCCCCCCccEEEeecCCchhhhhhhccCCCCCCCCCC---CCC----CCCCCCCCCCCC--CccchhhHHHhhhhhcccc
Q 011152 102 KCDPGQVLLRVYMYDLPPEFHFGLLGWKGKPNQTWPD---VSK----QSRIWPYPGGLN--LQHSIEYWLTLDLLSSNIA 172 (492)
Q Consensus 102 ~c~~~~~~~~VYvYdLPp~Fn~~ll~~c~~~~~~w~d---~~~----~~~~~~~~~g~~--~~~s~e~w~~~d~~~~e~~ 172 (492)
.|.+ .+||||++|+.|+.+++.+|......|.. +|. .+..+.|++..+ ..+..++|+.+||+++|.+
T Consensus 69 ~~~~----~~v~~~~~~~~F~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~~~~~~~~E~~ 144 (464)
T KOG1021|consen 69 ICAG----ASVYVYNLPSGFDVSLLLFHKQIPTSPNNKKFMCSYKLNEKRGKVYVYHEGNKPLFHTPSWCLTDQYASEGI 144 (464)
T ss_pred cccC----cceeeeccchhhhhhhhccCccccccCcchhhhhhhhhhcccCceEEecCCCCccccCCCcccccchhHHHH
Confidence 4666 79999999999999999999863224555 552 344566655444 5677789999999999999
Q ss_pred ccCCC---CceeecCCCCCCcEEEEcccccccccccc-cccCcchhhhhHHHHHHHHHHHhcCccccccCCccEEEEecc
Q 011152 173 NIGRP---CTTIRVMNSSLADVIFVPFFSSLSYNRYS-KLRGKEKISVNKMLQRKLVQFLMNQDGWKRLGGKDHLIVAHH 248 (492)
Q Consensus 173 ~~~r~---~s~~rT~DP~eAdlFfVP~y~~l~~~~~~-~~~~~~~~~~~~~l~~~lv~~L~~~PyW~R~gGrDHf~v~~~ 248 (492)
+|.+. .++|||.||++||+||||||++++++++. +.........++.++.+++.|+++||||||++|+|||||++|
T Consensus 145 ~~~~~~~~~~~~Rt~dp~~Ad~f~vPf~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~p~W~Rs~G~DH~~v~~~ 224 (464)
T KOG1021|consen 145 FHNRMLRRESAFRTLDPLEADAFYVPFYASLDYNRALLWPDERVNAILRSILQDYIVALLSKQPYWNRSSGRDHFFVACH 224 (464)
T ss_pred HHHHHhcccCceecCChhhCcEEEEcceeeEehhhhcccCCcccchHHHHHHHHHHHHHHhcCchhhccCCCceEEEeCC
Confidence 99883 68999999999999999999999997763 221212345677889999999999999999999999999999
Q ss_pred CCchhHHHHhhcCcEEEeecCCC--CcccccCCC-ceeeccccccccCCCCC-----CCCCCCCCCeEEEEeeccccCCC
Q 011152 249 PNSMLDARRQLGSAMFVLADFGR--YPVEIANVE-KDIIAPYMHLVRTIPGG-----ESPPFDQRPTLAYFQGAIYRKDG 320 (492)
Q Consensus 249 d~~~~~~~~~~~~ai~vl~~fg~--~~~~~~~~~-kDVviP~~~~~~~~p~~-----~~~~~~~R~~L~~FaG~~~~~~~ 320 (492)
+++.......+++++..+.+++. ....-+.+. +||++||++..++.... ......+|++|++|+|+. .+
T Consensus 225 ~~~~~~~~~~~~~~~~~i~~~~n~a~ls~~~~~~~~dv~iP~~~~~~~~~~~~~~~~~~~~~~~R~~L~~F~G~~---~~ 301 (464)
T KOG1021|consen 225 DWGDFRRRSDWGASISLIPEFCNGALLSLEFFPWNKDVAIPYPTIPHPLSPPENSWQGGVPFSNRPILAFFAGAP---AG 301 (464)
T ss_pred cchheeeccchhhHHHHHHhhCCcceeecccccCCCcccCCCccCcCccCccccccccCCCCCCCceEEEEeccc---cC
Confidence 99977665445555555555552 112223455 99999999876654221 234567999999999996 58
Q ss_pred chhhHHHHHHhhc----CCCeEEEeCcccCCCcchhhhcccCCcEEEeeCCCCCCCchHHHHHhcCceeEEeeCCcccCc
Q 011152 321 GVIRQELYYLLKD----EKDVHFTFGSIQGDGVKNAGQGMASSKFCLNIAGDTPSSNRLFDAIASHCVPVIISDEIELPF 396 (492)
Q Consensus 321 ~~iR~~L~~~~~~----~~~~~~~~g~~~~~~~~~y~~~m~~S~FCL~P~Gd~~~s~RlfDAi~aGCIPViisd~~~LPF 396 (492)
+.||++|+++|++ ...+.+..|...|+++..|.+.|++|+|||||+||+++|+|+||||++|||||||+|+++|||
T Consensus 302 ~~iR~~L~~~~~~~~~~~~~~~~~~g~~~~~~~~~y~~~m~~S~FCL~p~Gd~~ts~R~fdai~~gCvPViisd~~~lpf 381 (464)
T KOG1021|consen 302 GQIRSILLDLWKKDPDTEVFVNCPRGKVSCDRPLNYMEGMQDSKFCLCPPGDTPTSPRLFDAIVSGCVPVIISDGIQLPF 381 (464)
T ss_pred CcHHHHHHHHhhcCcCccccccCCCCccccCCcchHHHHhhcCeEEECCCCCCcccHhHHHHHHhCCccEEEcCCcccCc
Confidence 8999999999998 233455567667888999999999999999999999999999999999999999999999999
Q ss_pred cCCCCCCcEEEEEeccccchhhhHHHHHhCCCHHHHHHHHHHHHH-HhhceEecC--CCCCCCHHHHHHHHHHhhchhhh
Q 011152 397 EDVLDYSEFCITVHSTDAIKKGFLLNLLRGIKQEQWTKMWERLKE-VVQHFEYQY--PSQPGDAVDMIWEAVSRKVPSVR 473 (492)
Q Consensus 397 ~dvlDw~~fSV~I~e~dv~~~~~l~~iL~~I~~~~i~~Mr~~l~~-v~~~f~y~~--p~~~~DAf~~il~~l~~Rv~~~r 473 (492)
++++||++|||+|+++++.+. +.++|.+|+.+++.+||+++++ +.++|++.. |.+.+||||+++++|..|+.+++
T Consensus 382 ~~~~d~~~fSV~v~~~~v~~~--~~~iL~~i~~~~~~~m~~~v~~~v~r~~~~~~~~~~~~~da~~~~~~~v~~r~~~~~ 459 (464)
T KOG1021|consen 382 GDVLDWTEFSVFVPEKDVPEL--IKNILLSIPEEEVLRMRENVIRLVPRHFLKKPPGPPKRGDAFHMILHSLWRRLHKLR 459 (464)
T ss_pred CCCccceEEEEEEEHHHhhhH--HHHHHHhcCHHHHHHHHHHHHHHHHhhEEeCCCCCCCcchhHHHHHhhhhhcccccc
Confidence 999999999999998888773 5999999999999999999995 999999998 77889999999999999998876
Q ss_pred h
Q 011152 474 F 474 (492)
Q Consensus 474 ~ 474 (492)
.
T Consensus 460 ~ 460 (464)
T KOG1021|consen 460 S 460 (464)
T ss_pred c
Confidence 3
No 2
>PF03016 Exostosin: Exostosin family; InterPro: IPR004263 Hereditary multiple exostoses (EXT) is an autosomal dominant disorder that is characterised by the appearance of multiple outgrowths of the long bones (exostoses) at their epiphyses []. Mutations in two homologous genes, EXT1 and EXT2, are responsible for the EXT syndrome. The human and mouse EXT genes have at least two homologs in the invertebrate Caenorhabditis elegans, indicating that they do not function exclusively as regulators of bone growth. EXT1 and EXT2 have both been shown to encode glycosyltransferases involved in the chain elongation step of heparan sulphate biosynthesis [].; GO: 0016020 membrane
Probab=100.00 E-value=3.6e-54 Score=432.65 Aligned_cols=289 Identities=32% Similarity=0.473 Sum_probs=218.9
Q ss_pred cEEEeecCCchhhhhhhccCCCCCCCCCCCCCCCCCCCCCCCCCCccchhhHHHhhhhhccccccCCCCceeecCCCCCC
Q 011152 110 LRVYMYDLPPEFHFGLLGWKGKPNQTWPDVSKQSRIWPYPGGLNLQHSIEYWLTLDLLSSNIANIGRPCTTIRVMNSSLA 189 (492)
Q Consensus 110 ~~VYvYdLPp~Fn~~ll~~c~~~~~~w~d~~~~~~~~~~~~g~~~~~s~e~w~~~d~~~~e~~~~~r~~s~~rT~DP~eA 189 (492)
+||||||||++||.+++....... .+. ....+++.|.|+++.+.. |+++|.||+||
T Consensus 5 lkVYVY~lp~~~~~~~~~~~~~~~---~~~-----------~~~~~~~~e~~l~~~l~~----------s~~~T~dp~eA 60 (302)
T PF03016_consen 5 LKVYVYPLPPKFNKDLLDPREDEQ---CSW-----------YETSQYALEVILHEALLN----------SPFRTDDPEEA 60 (302)
T ss_pred CEEEEEeCCccccccceecccccc---CCC-----------cccccchHHHHHHHHHHh----------CCcEeCCHHHC
Confidence 999999999999999994211100 001 112467778887755443 45799999999
Q ss_pred cEEEEcccccccccccccccCcchhhhhHHHHHHHHHHHhcCccccccCCccEEEEeccCCchhHH---HHhhcCcEEEe
Q 011152 190 DVIFVPFFSSLSYNRYSKLRGKEKISVNKMLQRKLVQFLMNQDGWKRLGGKDHLIVAHHPNSMLDA---RRQLGSAMFVL 266 (492)
Q Consensus 190 dlFfVP~y~~l~~~~~~~~~~~~~~~~~~~l~~~lv~~L~~~PyW~R~gGrDHf~v~~~d~~~~~~---~~~~~~ai~vl 266 (492)
|+||||+|.++.. ...+... ......+.+...+..+++++|||||++|+||||++++++|.+.. +....+++.++
T Consensus 61 dlF~vP~~~~~~~-~~~~~~~-~~~~~~~~~~~~~~~~~~~~p~w~r~~G~dH~~~~~~~~g~~~~~~~~~~~~~~~~~~ 138 (302)
T PF03016_consen 61 DLFFVPFYSSCYF-HHWWGSP-NSGADRDSLSDALRHLLASYPYWNRSGGRDHFFVNSHDRGGCSFDRNPRLMNNSIRAV 138 (302)
T ss_pred eEEEEEccccccc-ccccCCc-cchhhHHHHHHHHHHHHhcCchhhccCCCCeEEEeccccccccccccHhhhccchhhe
Confidence 9999999998864 1111111 11123345566677888999999999999999999999654432 23334444444
Q ss_pred ecCCCCcccccCCCceeeccccccccCCCCC---CCCCCCCCCeEEEEeeccccC---CCchhhHHHHHHhhcCCCeEEE
Q 011152 267 ADFGRYPVEIANVEKDIIAPYMHLVRTIPGG---ESPPFDQRPTLAYFQGAIYRK---DGGVIRQELYYLLKDEKDVHFT 340 (492)
Q Consensus 267 ~~fg~~~~~~~~~~kDVviP~~~~~~~~p~~---~~~~~~~R~~L~~FaG~~~~~---~~~~iR~~L~~~~~~~~~~~~~ 340 (492)
...+.+...++++++||++|+.......... ......+|++|++|+|.+... .++.+|+.|++.|++.++..+.
T Consensus 139 ~~~~~~~~~~~~~~~Di~~P~~~~~~~~~~~~~~~~~~~~~R~~l~~f~g~~~~~~~~~~~~~r~~l~~~~~~~~~~~~~ 218 (302)
T PF03016_consen 139 VAFSSFSSSCFRPGFDIVIPPFVPPSSLPDWRPWPQRPPARRPYLLFFAGTIRPSSNDYSGGVRQRLLDECKSDPDFRCS 218 (302)
T ss_pred eccCCCCcCcccCCCCeeccccccccccCCccccccCCccCCceEEEEeeeccccccccchhhhhHHHHhcccCCcceee
Confidence 4445455778999999999997543321111 123467899999999998765 3468999999999988876654
Q ss_pred eCcccCCCcchhhhcccCCcEEEeeCCCCCCCchHHHHHhcCceeEEeeCCcccCccCCCCCCcEEEEEeccccchhhhH
Q 011152 341 FGSIQGDGVKNAGQGMASSKFCLNIAGDTPSSNRLFDAIASHCVPVIISDEIELPFEDVLDYSEFCITVHSTDAIKKGFL 420 (492)
Q Consensus 341 ~g~~~~~~~~~y~~~m~~S~FCL~P~Gd~~~s~RlfDAi~aGCIPViisd~~~LPF~dvlDw~~fSV~I~e~dv~~~~~l 420 (492)
.+...+.+..+|.+.|++|+|||||+|+++++.||+|||.+|||||||+|+++|||+++|||++|||+|+++|+++ |
T Consensus 219 ~~~~~~~~~~~~~~~l~~S~FCL~p~G~~~~s~Rl~eal~~GcIPVii~d~~~lPf~~~ldw~~fsv~v~~~~~~~---l 295 (302)
T PF03016_consen 219 DGSETCPSPSEYMELLRNSKFCLCPRGDGPWSRRLYEALAAGCIPVIISDDYVLPFEDVLDWSRFSVRVPEADLPE---L 295 (302)
T ss_pred ecccccccchHHHHhcccCeEEEECCCCCcccchHHHHhhhceeeEEecCcccCCcccccCHHHEEEEECHHHHHH---H
Confidence 4433445567799999999999999999999999999999999999999999999999999999999999999987 9
Q ss_pred HHHHhCC
Q 011152 421 LNLLRGI 427 (492)
Q Consensus 421 ~~iL~~I 427 (492)
.++|++|
T Consensus 296 ~~iL~~i 302 (302)
T PF03016_consen 296 PEILRSI 302 (302)
T ss_pred HHHHhcC
Confidence 9999986
No 3
>KOG2264 consensus Exostosin EXT1L [Signal transduction mechanisms]
Probab=99.93 E-value=6.2e-25 Score=229.38 Aligned_cols=313 Identities=17% Similarity=0.169 Sum_probs=213.5
Q ss_pred hhccCCCCCCCCCC-CCCCC-CCCCCCCCC---CCccchhhHHHhhhhhccccccCCCCceeecCCCCCCcEEEEccccc
Q 011152 125 LLGWKGKPNQTWPD-VSKQS-RIWPYPGGL---NLQHSIEYWLTLDLLSSNIANIGRPCTTIRVMNSSLADVIFVPFFSS 199 (492)
Q Consensus 125 ll~~c~~~~~~w~d-~~~~~-~~~~~~~g~---~~~~s~e~w~~~d~~~~e~~~~~r~~s~~rT~DP~eAdlFfVP~y~~ 199 (492)
+..-|+.+ +|+++ .|..+ ++|+|-+.. ..-++.++|+.+- |. |++ ....+.|+||+.| |+||-....
T Consensus 175 ~~~~c~lh-ncfdySRCsltSgfPVYvyd~D~~~~G~~~d~~lk~~-fq-~t~----~~n~~~ve~pd~A-Ciyi~lvge 246 (907)
T KOG2264|consen 175 QISPCQLH-NCFDYSRCSLTSGFPVYVYDSDIITSGQSEDEWLKQV-FQ-ETI----PNNVYLVETPDKA-CIYIHLVGE 246 (907)
T ss_pred ccCcccch-hccccccccccCCceeEEeccceeecccchHHHHHHH-HH-Hhc----ccceeEeeCCCcc-EEEEEEecc
Confidence 34455543 44443 67555 788775432 1234567888632 22 222 4567899999999 888876543
Q ss_pred ccccccccccCcchhhhhHHHHHHHHHHHhcCccccccCCccEEEEeccCCchh---HHHHhhcCcEEEeecCCCCcccc
Q 011152 200 LSYNRYSKLRGKEKISVNKMLQRKLVQFLMNQDGWKRLGGKDHLIVAHHPNSML---DARRQLGSAMFVLADFGRYPVEI 276 (492)
Q Consensus 200 l~~~~~~~~~~~~~~~~~~~l~~~lv~~L~~~PyW~R~gGrDHf~v~~~d~~~~---~~~~~~~~ai~vl~~fg~~~~~~ 276 (492)
.- . +. +.. ..++-+ |-+.|||+ ++|+||++++....+.. -.+...+.||.+.+.|. ...
T Consensus 247 ~q-~-------P~-~l~----p~elek-lyslp~w~-~dg~Nhvl~Nl~r~s~~~n~lyn~~t~raivvQssf~---~~q 308 (907)
T KOG2264|consen 247 IQ-S-------PV-VLT----PAELEK-LYSLPHWR-TDGFNHVLFNLGRPSDTQNLLYNFQTGRAIVVQSSFY---TVQ 308 (907)
T ss_pred cc-C-------CC-cCC----hHhhhh-hhcCcccc-CCCcceEEEEccCccccccceeEeccCceEEEeecce---eee
Confidence 21 0 10 111 112222 77899995 89999999975433211 13445678999988875 467
Q ss_pred cCCCceeeccccccccCCCCC---CCCCCCCCCeEEEEeeccccCCCc--hhhHHHHHHhhcC--------CC--eEEEe
Q 011152 277 ANVEKDIIAPYMHLVRTIPGG---ESPPFDQRPTLAYFQGAIYRKDGG--VIRQELYYLLKDE--------KD--VHFTF 341 (492)
Q Consensus 277 ~~~~kDVviP~~~~~~~~p~~---~~~~~~~R~~L~~FaG~~~~~~~~--~iR~~L~~~~~~~--------~~--~~~~~ 341 (492)
++|++|.++|........+.- ....+.+|++|++|+|.+++..+. ..+.-..++..+. +- +.|.+
T Consensus 309 ~RpgfDl~V~pv~h~~~e~~~~e~~p~vP~~RkyL~t~qgki~~~~ssLn~~~aF~~e~~adp~~~a~qds~i~qv~c~~ 388 (907)
T KOG2264|consen 309 IRPGFDLPVDPVNHIAVEKNFVELTPLVPFQRKYLITLQGKIESDNSSLNEFSAFSEELSADPSRRAVQDSPIVQVKCSF 388 (907)
T ss_pred eccCCCcccCcccccccCccceecCcccchhhheeEEEEeeecccccccchhhhhHHHhccCCcccccccCceEEEEEee
Confidence 899999988765432222111 124467999999999998765432 2333222222211 11 12222
Q ss_pred Cc-----------ccCCCcchhhhcccCCcEEEe-eCCCCCC-----CchHHHHHhcCceeEEeeCCcccCccCCCCCCc
Q 011152 342 GS-----------IQGDGVKNAGQGMASSKFCLN-IAGDTPS-----SNRLFDAIASHCVPVIISDEIELPFEDVLDYSE 404 (492)
Q Consensus 342 g~-----------~~~~~~~~y~~~m~~S~FCL~-P~Gd~~~-----s~RlfDAi~aGCIPViisd~~~LPF~dvlDw~~ 404 (492)
.. ..|+..+...+++..|+|||+ |+||+-- -.|++||+..||||||+++...|||+|.+||.+
T Consensus 389 t~k~Qe~~SLpewalcg~~~~RrqLlk~STF~lilpp~d~rv~S~~~~~r~~eaL~~GavPviLg~~~~LPyqd~idWrr 468 (907)
T KOG2264|consen 389 TCKNQENCSLPEWALCGERERRRQLLKSSTFCLILPPGDPRVISEMFFQRFLEALQLGAVPVILGNSQLLPYQDLIDWRR 468 (907)
T ss_pred ccccCCCCCcchhhhccchHHHHHHhccceeEEEecCCCcchhhHHHHHHHHHHHhcCCeeEEeccccccchHHHHHHHH
Confidence 11 024445567899999999998 7888732 468999999999999999999999999999999
Q ss_pred EEEEEeccccchhhhHHHHHhCCCHHHHHHHHHHHHHHhhceEecCCCCCCCHHHHHHHHHHhhch
Q 011152 405 FCITVHSTDAIKKGFLLNLLRGIKQEQWTKMWERLKEVVQHFEYQYPSQPGDAVDMIWEAVSRKVP 470 (492)
Q Consensus 405 fSV~I~e~dv~~~~~l~~iL~~I~~~~i~~Mr~~l~~v~~~f~y~~p~~~~DAf~~il~~l~~Rv~ 470 (492)
.++++|...+.+ ++.+|+++.+.++.+||++++-+|..++-+ ..-.+++++++|+.|+.
T Consensus 469 aal~lPkaR~tE---~HFllrs~~dsDll~mRRqGRl~wEtYls~----~~~~~~tvlA~lR~rlq 527 (907)
T KOG2264|consen 469 AALRLPKARLTE---AHFLLRSFEDSDLLEMRRQGRLFWETYLSD----RHLLARTVLAALRYRLQ 527 (907)
T ss_pred HhhhCCccccch---HHHHHHhcchhhHHHHHhhhhhhHHHHhhH----HHHHHHHHHHHHHHhhC
Confidence 999999999988 999999999999999999999999997653 23568899999998874
No 4
>KOG1022 consensus Acetylglucosaminyltransferase EXT2/exostosin 2 [Carbohydrate transport and metabolism; Cell wall/membrane/envelope biogenesis; Extracellular structures]
Probab=99.61 E-value=2.9e-15 Score=157.13 Aligned_cols=237 Identities=19% Similarity=0.117 Sum_probs=169.7
Q ss_pred ceeecCCCCCCcEEEEcccccccccccccccCcchhhhhHHHHHHHHHHHhcCccccccCCccEEEEeccCCchhHHHH-
Q 011152 179 TTIRVMNSSLADVIFVPFFSSLSYNRYSKLRGKEKISVNKMLQRKLVQFLMNQDGWKRLGGKDHLIVAHHPNSMLDARR- 257 (492)
Q Consensus 179 s~~rT~DP~eAdlFfVP~y~~l~~~~~~~~~~~~~~~~~~~l~~~lv~~L~~~PyW~R~gGrDHf~v~~~d~~~~~~~~- 257 (492)
|.+.|.|+++| |.|+|-..-++++.+.|. + ....|++.-.|.| |.+|..+..-+++..+...
T Consensus 135 S~yyt~n~N~a-clf~Ps~d~lnQn~l~~k-----------l---~~~ala~l~~wdr--g~nH~~fnmLpGg~p~ynta 197 (691)
T KOG1022|consen 135 SFYYTFNYNGA-CLFMPSSDELNQNPLSWK-----------L---EKVALAKLLVWDR--GVNHEGFNMLPGGDPTYNTA 197 (691)
T ss_pred ccceecCCCce-EEEecchhhhccCcchHH-----------H---HHHHHhcccchhc--ccceeeEeeccCCCCCcccc
Confidence 55789999999 999999888777765442 1 1223567779985 9999999877766443221
Q ss_pred ---hhcCcEEEeecCCCCcccccCCCceeeccccccccCCCCCCCCCCCCCCeEEEEeeccccCCCchhhHHHHHHhhcC
Q 011152 258 ---QLGSAMFVLADFGRYPVEIANVEKDIIAPYMHLVRTIPGGESPPFDQRPTLAYFQGAIYRKDGGVIRQELYYLLKDE 334 (492)
Q Consensus 258 ---~~~~ai~vl~~fg~~~~~~~~~~kDVviP~~~~~~~~p~~~~~~~~~R~~L~~FaG~~~~~~~~~iR~~L~~~~~~~ 334 (492)
-..+++...+.||.|. ++.++||.+|.....-. .. .......|.+++--.| .+.+..+|..|.+.....
T Consensus 198 ldv~~d~a~~~gggf~tW~---yr~g~dv~ipv~Sp~~v-~~-~~~~~g~r~~~l~~~q---~n~~pr~r~~l~el~~kh 269 (691)
T KOG1022|consen 198 LDVGQDEAWYSGGGFGTWK---YRKGNDVYIPVRSPGNV-GR-AFLYDGSRYRVLQDCQ---ENYGPRIRVSLIELLSKH 269 (691)
T ss_pred ccCCcceeEEecCCcCccc---ccCCCcccccccccccc-Cc-cccCCccceeeeeccc---cccchHhHHhHHHHHhhc
Confidence 2345677777888876 47899999998642100 00 0011234544333222 234667888888876554
Q ss_pred CCeEEEe-----------CcccCCCcchhhhcccCCcEEEeeCCCCCCCchHHHHHhcCceeEEeeCCcccCccCCCCCC
Q 011152 335 KDVHFTF-----------GSIQGDGVKNAGQGMASSKFCLNIAGDTPSSNRLFDAIASHCVPVIISDEIELPFEDVLDYS 403 (492)
Q Consensus 335 ~~~~~~~-----------g~~~~~~~~~y~~~m~~S~FCL~P~Gd~~~s~RlfDAi~aGCIPViisd~~~LPF~dvlDw~ 403 (492)
..-.+.. |....+-.-+|...+...+||+.-+|.+-...-+.+-+.+||+|||..|.+.|||++|+||.
T Consensus 270 ~e~~l~l~~c~nlsl~~r~~~qhH~~~~yp~~l~~~~fc~~~R~~r~gq~~lv~~~~a~c~pvi~vd~y~lpf~~Vvdw~ 349 (691)
T KOG1022|consen 270 EERELELPFCLNLSLNSRGVRQHHFDVKYPSSLEFIGFCDGDRVTRGGQFHLVILGYASCAPVISVDIYLLPFLGVVDWI 349 (691)
T ss_pred cceEEecchhccccccccchhhcccccccccccceeeeEeccccccCCccceehhhhcccceeeeeehhhhhhhhhhhce
Confidence 3322211 11111223468899999999999988887888899999999999999999999999999999
Q ss_pred cEEEEEeccccchhhhHHHHHhCCCHHHHHHHHHHHHHHh
Q 011152 404 EFCITVHSTDAIKKGFLLNLLRGIKQEQWTKMWERLKEVV 443 (492)
Q Consensus 404 ~fSV~I~e~dv~~~~~l~~iL~~I~~~~i~~Mr~~l~~v~ 443 (492)
..||+++|..+.+ +...|++|+...+-+|+.+..-.+
T Consensus 350 ~aSv~~~e~~~~~---v~~~l~~i~~~~i~sl~~r~~~~r 386 (691)
T KOG1022|consen 350 VASVWCMEYYAGK---VMDALLNIETAGICSLQLRRIGSR 386 (691)
T ss_pred eeeEEeehhhHHH---HHHHhhcchhcchhhhhhhhhhhh
Confidence 9999999998866 899999999999999988766433
No 5
>cd03814 GT1_like_2 This family is most closely related to the GT1 family of glycosyltransferases. Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homolog
Probab=96.28 E-value=0.032 Score=55.63 Aligned_cols=94 Identities=20% Similarity=0.176 Sum_probs=64.5
Q ss_pred chhhhcccCCcEEEeeCCCCCCCchHHHHHhcCceeEEeeCCcccCccCCCCCCcEEEEEeccccchhh-hHHHHHhCCC
Q 011152 350 KNAGQGMASSKFCLNIAGDTPSSNRLFDAIASHCVPVIISDEIELPFEDVLDYSEFCITVHSTDAIKKG-FLLNLLRGIK 428 (492)
Q Consensus 350 ~~y~~~m~~S~FCL~P~Gd~~~s~RlfDAi~aGCIPViisd~~~LPF~dvlDw~~fSV~I~e~dv~~~~-~l~~iL~~I~ 428 (492)
++..+.|..+.+++.|.+....+..++|||++|| |||.++.-. ..+++.-....+.++..+..+.. .|.+++. .
T Consensus 258 ~~~~~~~~~~d~~l~~s~~e~~~~~~lEa~a~g~-PvI~~~~~~--~~~~i~~~~~g~~~~~~~~~~l~~~i~~l~~--~ 332 (364)
T cd03814 258 EELAAAYASADVFVFPSRTETFGLVVLEAMASGL-PVVAPDAGG--PADIVTDGENGLLVEPGDAEAFAAALAALLA--D 332 (364)
T ss_pred HHHHHHHHhCCEEEECcccccCCcHHHHHHHcCC-CEEEcCCCC--chhhhcCCcceEEcCCCCHHHHHHHHHHHHc--C
Confidence 4567789999999999887777889999999999 788877542 22334333455666666653311 1333333 5
Q ss_pred HHHHHHHHHHHHHHhhceEe
Q 011152 429 QEQWTKMWERLKEVVQHFEY 448 (492)
Q Consensus 429 ~~~i~~Mr~~l~~v~~~f~y 448 (492)
+++..+|.++..+....+.|
T Consensus 333 ~~~~~~~~~~~~~~~~~~~~ 352 (364)
T cd03814 333 PELRRRMAARARAEAERRSW 352 (364)
T ss_pred HHHHHHHHHHHHHHHhhcCH
Confidence 78888999888887666554
No 6
>PF00852 Glyco_transf_10: Glycosyltransferase family 10 (fucosyltransferase); InterPro: IPR001503 The biosynthesis of disaccharides, oligosaccharides and polysaccharides involves the action of hundreds of different glycosyltransferases. These enzymes catalyse the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. A classification of glycosyltransferases using nucleotide diphospho-sugar, nucleotide monophospho-sugar and sugar phosphates (2.4.1.- from EC) and related proteins into distinct sequence based families has been described []. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. The same three-dimensional fold is expected to occur within each of the families. Because 3-D structures are better conserved than sequences, several of the families defined on the basis of sequence similarities may have similar 3-D structures and therefore form 'clans'. Glycosyltransferase family 10 GT10 from CAZY comprises enzymes with two known activities; galactoside 3(4)-L-fucosyltransferase (2.4.1.65 from EC) and galactoside 3-fucosyltransferase (2.4.1.152 from EC). The galactoside 3-fucosyltransferases display similarities with the alpha-2 and alpha-6-fucosyltranferases []. The biosynthesis of the carbohydrate antigen sialyl Lewis X (sLe(x)) is dependent on the activity of an galactoside 3-fucosyltransferase. This enzyme catalyses the transfer of fucose from GDP-beta-fucose to the 3-OH of N-acetylglucosamine present in lactosamine acceptors []. Some of the proteins in this group are responsible for the molecular basis of the blood group antigens, surface markers on the outside of the red blood cell membrane. Most of these markers are proteins, but some are carbohydrates attached to lipids or proteins [Reid M.E., Lomas-Francis C. The Blood Group Antigen FactsBook Academic Press, London / San Diego, (1997)]. Galactoside 3(4)-L-fucosyltransferase (2.4.1.65 from EC) belongs to the Lewis blood group system and is associated with Le(a/b) antigen. ; GO: 0008417 fucosyltransferase activity, 0006486 protein glycosylation, 0016020 membrane; PDB: 2NZX_B 2NZW_C 2NZY_C.
Probab=96.27 E-value=0.0071 Score=63.30 Aligned_cols=139 Identities=16% Similarity=0.171 Sum_probs=64.2
Q ss_pred cCCCceeeccccccccCCCCCC----CCCCCCCCeEE-EEeeccccCCCchhhHHHHHHhhcCCCeEEEeCccc---CCC
Q 011152 277 ANVEKDIIAPYMHLVRTIPGGE----SPPFDQRPTLA-YFQGAIYRKDGGVIRQELYYLLKDEKDVHFTFGSIQ---GDG 348 (492)
Q Consensus 277 ~~~~kDVviP~~~~~~~~p~~~----~~~~~~R~~L~-~FaG~~~~~~~~~iR~~L~~~~~~~~~~~~~~g~~~---~~~ 348 (492)
++.+-||..||........... ......++-++ +++.... ...-|..+++.+++.-.+. .+|.+. +..
T Consensus 142 Yr~dSDi~~py~~~~~~~~~~~~~~~~~~~~~K~~~~~w~~Snc~---~~~~R~~~~~~L~~~~~vd-~yG~c~~~~~~~ 217 (349)
T PF00852_consen 142 YRRDSDIPLPYGYFSPRESPSEKDDLPNILKKKTKLAAWIVSNCN---PHSGREEYVRELSKYIPVD-SYGKCGNNNPCP 217 (349)
T ss_dssp -------------------------------TSSEEEEE--S-S-----H-HHHHHHHHHHTTS-EE-E-SSTT--SSS-
T ss_pred cccccccccccccccccccccccccccccccCCCceEEEEeeCcC---CcccHHHHHHHHHhhcCeE-ccCCCCCCCCcc
Confidence 4567899999865332110111 01223444444 4455542 2234999999998774433 356541 112
Q ss_pred cchhhhcccCCcEEEeeC---CCCCCCchHHHHHhcCceeEEee--C-Cc--ccCccCCCCCCcEEEEEeccccchhhhH
Q 011152 349 VKNAGQGMASSKFCLNIA---GDTPSSNRLFDAIASHCVPVIIS--D-EI--ELPFEDVLDYSEFCITVHSTDAIKKGFL 420 (492)
Q Consensus 349 ~~~y~~~m~~S~FCL~P~---Gd~~~s~RlfDAi~aGCIPViis--d-~~--~LPF~dvlDw~~fSV~I~e~dv~~~~~l 420 (492)
.....+.+++-+|.|+.. .....+--+|+|+.+|||||+++ . ++ .+|=...|+.++| .....|
T Consensus 218 ~~~~~~~~~~ykF~lafENs~c~dYiTEK~~~al~~g~VPI~~G~~~~~~~~~~P~~SfI~~~df---------~s~~~L 288 (349)
T PF00852_consen 218 RDCKLELLSKYKFYLAFENSNCPDYITEKFWNALLAGTVPIYWGPPRPNYEEFAPPNSFIHVDDF---------KSPKEL 288 (349)
T ss_dssp -S-HHHHHHTEEEEEEE-SS--TT---HHHHHHHHTTSEEEEES---TTHHHHS-GGGSEEGGGS---------SSHHHH
T ss_pred cccccccccCcEEEEEecCCCCCCCCCHHHHHHHHCCeEEEEECCEecccccCCCCCCccchhcC---------CCHHHH
Confidence 234788899999999964 34556889999999999999999 3 33 3665665655554 333347
Q ss_pred HHHHhCCC
Q 011152 421 LNLLRGIK 428 (492)
Q Consensus 421 ~~iL~~I~ 428 (492)
.+.|+.+.
T Consensus 289 a~yl~~l~ 296 (349)
T PF00852_consen 289 ADYLKYLD 296 (349)
T ss_dssp HHHHHHHH
T ss_pred HHHHHHHh
Confidence 77777663
No 7
>cd03820 GT1_amsD_like This family is most closely related to the GT1 family of glycosyltransferases. AmSD in Erwinia amylovora has been shown to be involved in the biosynthesis of amylovoran, the acidic exopolysaccharide acting as a virulence factor. This enzyme may be responsible for the formation of galactose alpha-1,6 linkages in amylovoran.
Probab=95.45 E-value=0.03 Score=54.81 Aligned_cols=94 Identities=19% Similarity=0.138 Sum_probs=63.0
Q ss_pred chhhhcccCCcEEEeeCCCCCCCchHHHHHhcCceeEEeeCCcccCccCCCCCCcEEEEEeccccchhhhHHHHHhCC--
Q 011152 350 KNAGQGMASSKFCLNIAGDTPSSNRLFDAIASHCVPVIISDEIELPFEDVLDYSEFCITVHSTDAIKKGFLLNLLRGI-- 427 (492)
Q Consensus 350 ~~y~~~m~~S~FCL~P~Gd~~~s~RlfDAi~aGCIPViisd~~~LPF~dvlDw~~fSV~I~e~dv~~~~~l~~iL~~I-- 427 (492)
++..+.|+++.+++.|.........++|||++||. ||.++....+ +++++-....+.++..|+.+ +.+.+..+
T Consensus 244 ~~~~~~~~~ad~~i~ps~~e~~~~~~~Ea~a~G~P-vi~~~~~~~~-~~~~~~~~~g~~~~~~~~~~---~~~~i~~ll~ 318 (348)
T cd03820 244 KNIEEYYAKASIFVLTSRFEGFPMVLLEAMAFGLP-VISFDCPTGP-SEIIEDGVNGLLVPNGDVEA---LAEALLRLME 318 (348)
T ss_pred chHHHHHHhCCEEEeCccccccCHHHHHHHHcCCC-EEEecCCCch-HhhhccCcceEEeCCCCHHH---HHHHHHHHHc
Confidence 45678899999999998666567889999999986 4555533222 22333334566677666544 33333332
Q ss_pred CHHHHHHHHHHHHHHhhceEe
Q 011152 428 KQEQWTKMWERLKEVVQHFEY 448 (492)
Q Consensus 428 ~~~~i~~Mr~~l~~v~~~f~y 448 (492)
.++...+|.++.+++.+.|.|
T Consensus 319 ~~~~~~~~~~~~~~~~~~~~~ 339 (348)
T cd03820 319 DEELRKRMGANARESAERFSI 339 (348)
T ss_pred CHHHHHHHHHHHHHHHHHhCH
Confidence 678888999888777777654
No 8
>cd03801 GT1_YqgM_like This family is most closely related to the GT1 family of glycosyltransferases and named after YqgM in Bacillus licheniformis about which little is known. Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold.
Probab=95.41 E-value=0.03 Score=54.86 Aligned_cols=93 Identities=18% Similarity=0.180 Sum_probs=64.6
Q ss_pred chhhhcccCCcEEEeeCCCCCCCchHHHHHhcCceeEEeeCCcccCccCCCCCCcEEEEEeccccchhhhHHHHHhCC--
Q 011152 350 KNAGQGMASSKFCLNIAGDTPSSNRLFDAIASHCVPVIISDEIELPFEDVLDYSEFCITVHSTDAIKKGFLLNLLRGI-- 427 (492)
Q Consensus 350 ~~y~~~m~~S~FCL~P~Gd~~~s~RlfDAi~aGCIPViisd~~~LPF~dvlDw~~fSV~I~e~dv~~~~~l~~iL~~I-- 427 (492)
+++.+.|..|.+.++|.-....+..++|||.+|| |||..+. -.+.+.+......+.++..|..+ +.+.|..+
T Consensus 267 ~~~~~~~~~~di~i~~~~~~~~~~~~~Ea~~~g~-pvI~~~~--~~~~~~~~~~~~g~~~~~~~~~~---l~~~i~~~~~ 340 (374)
T cd03801 267 EDLPALYAAADVFVLPSLYEGFGLVLLEAMAAGL-PVVASDV--GGIPEVVEDGETGLLVPPGDPEA---LAEAILRLLD 340 (374)
T ss_pred hhHHHHHHhcCEEEecchhccccchHHHHHHcCC-cEEEeCC--CChhHHhcCCcceEEeCCCCHHH---HHHHHHHHHc
Confidence 5678889999999999866666789999999997 6777765 23445555566677777765443 44444432
Q ss_pred CHHHHHHHHHHHH-HHhhceEe
Q 011152 428 KQEQWTKMWERLK-EVVQHFEY 448 (492)
Q Consensus 428 ~~~~i~~Mr~~l~-~v~~~f~y 448 (492)
.++...+|.++.+ .+.+.+.|
T Consensus 341 ~~~~~~~~~~~~~~~~~~~~~~ 362 (374)
T cd03801 341 DPELRRRLGEAARERVAERFSW 362 (374)
T ss_pred ChHHHHHHHHHHHHHHHHhcCH
Confidence 5667788888877 45555544
No 9
>PF00534 Glycos_transf_1: Glycosyl transferases group 1; InterPro: IPR001296 The biosynthesis of disaccharides, oligosaccharides and polysaccharides involves the action of hundreds of different glycosyltransferases. These enzymes catalyse the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. A classification of glycosyltransferases using nucleotide diphospho-sugar, nucleotide monophospho-sugar and sugar phosphates (2.4.1.- from EC) and related proteins into distinct sequence based families has been described []. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. The same three-dimensional fold is expected to occur within each of the families. Because 3-D structures are better conserved than sequences, several of the families defined on the basis of sequence similarities may have similar 3-D structures and therefore form 'clans'. Proteins containign this domain transfer UDP, ADP, GDP or CMP linked sugars to a variety of substrates, including glycogen, fructose-6-phosphate and lipopolysaccharides. The bacterial enzymes are involved in various biosynthetic processes that include exopolysaccharide biosynthesis, lipopolysaccharide core biosynthesis and the biosynthesis of the slime polysaccaride colanic acid. Mutations in this domain of the human N-acetylglucosaminyl-phosphatidylinositol biosynthetic protein are the cause of paroxysmal nocturnal hemoglobinuria (PNH), an acquired hemolytic blood disorder characterised by venous thrombosis, erythrocyte hemolysis, infections and defective hematopoiesis.; GO: 0009058 biosynthetic process; PDB: 2L7C_A 2IV3_B 2IUY_B 2XA9_A 2XA1_B 2X6R_A 2XMP_B 2XA2_B 2X6Q_A 3QHP_B ....
Probab=95.27 E-value=0.017 Score=52.57 Aligned_cols=86 Identities=19% Similarity=0.220 Sum_probs=52.0
Q ss_pred chhhhcccCCcEEEeeCCCCCCCchHHHHHhcCceeEEeeCCcccCccCCCCCCcEEEEEeccccchhhhHHHHHhCC--
Q 011152 350 KNAGQGMASSKFCLNIAGDTPSSNRLFDAIASHCVPVIISDEIELPFEDVLDYSEFCITVHSTDAIKKGFLLNLLRGI-- 427 (492)
Q Consensus 350 ~~y~~~m~~S~FCL~P~Gd~~~s~RlfDAi~aGCIPViisd~~~LPF~dvlDw~~fSV~I~e~dv~~~~~l~~iL~~I-- 427 (492)
.++.+.++.+.+.++|......+..+.|||.+|| |||.++.- .+.+++.=..-.+.++..++.+ +.+.+..+
T Consensus 84 ~~l~~~~~~~di~v~~s~~e~~~~~~~Ea~~~g~-pvI~~~~~--~~~e~~~~~~~g~~~~~~~~~~---l~~~i~~~l~ 157 (172)
T PF00534_consen 84 DELDELYKSSDIFVSPSRNEGFGLSLLEAMACGC-PVIASDIG--GNNEIINDGVNGFLFDPNDIEE---LADAIEKLLN 157 (172)
T ss_dssp HHHHHHHHHTSEEEE-BSSBSS-HHHHHHHHTT--EEEEESST--HHHHHSGTTTSEEEESTTSHHH---HHHHHHHHHH
T ss_pred cccccccccceecccccccccccccccccccccc-ceeecccc--CCceeeccccceEEeCCCCHHH---HHHHHHHHHC
Confidence 4678889999999999988888999999999999 66677632 1222222222345565555544 43333333
Q ss_pred CHHHHHHHHHHHHH
Q 011152 428 KQEQWTKMWERLKE 441 (492)
Q Consensus 428 ~~~~i~~Mr~~l~~ 441 (492)
.++....|.++.++
T Consensus 158 ~~~~~~~l~~~~~~ 171 (172)
T PF00534_consen 158 DPELRQKLGKNARE 171 (172)
T ss_dssp HHHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHhcC
Confidence 23556666666543
No 10
>cd03822 GT1_ecORF704_like This family is most closely related to the GT1 family of glycosyltransferases. ORF704 in E. coli has been shown to be involved in the biosynthesis of O-specific mannose homopolysaccharides.
Probab=94.88 E-value=0.053 Score=54.24 Aligned_cols=92 Identities=20% Similarity=0.164 Sum_probs=63.1
Q ss_pred chhhhcccCCcEEEeeCCCC--CCCchHHHHHhcCceeEEeeCCcccCccCCCCCCcEEEEEeccccchhhhHHHHHhCC
Q 011152 350 KNAGQGMASSKFCLNIAGDT--PSSNRLFDAIASHCVPVIISDEIELPFEDVLDYSEFCITVHSTDAIKKGFLLNLLRGI 427 (492)
Q Consensus 350 ~~y~~~m~~S~FCL~P~Gd~--~~s~RlfDAi~aGCIPViisd~~~LPF~dvlDw~~fSV~I~e~dv~~~~~l~~iL~~I 427 (492)
++..+.|+.+.+++.|.... ..+..+.|||++|| |||.++.-. .+.+.+. .-.+.++..|+.+ +.+.|..+
T Consensus 259 ~~~~~~~~~ad~~v~ps~~e~~~~~~~~~Ea~a~G~-PvI~~~~~~--~~~i~~~-~~g~~~~~~d~~~---~~~~l~~l 331 (366)
T cd03822 259 EELPELFSAADVVVLPYRSADQTQSGVLAYAIGFGK-PVISTPVGH--AEEVLDG-GTGLLVPPGDPAA---LAEAIRRL 331 (366)
T ss_pred HHHHHHHhhcCEEEecccccccccchHHHHHHHcCC-CEEecCCCC--hheeeeC-CCcEEEcCCCHHH---HHHHHHHH
Confidence 45678899999999998777 66788999999999 999887533 3333333 3345566555443 33333222
Q ss_pred --CHHHHHHHHHHHHHHhhceEe
Q 011152 428 --KQEQWTKMWERLKEVVQHFEY 448 (492)
Q Consensus 428 --~~~~i~~Mr~~l~~v~~~f~y 448 (492)
.+++..+|+++.++..+.+.|
T Consensus 332 ~~~~~~~~~~~~~~~~~~~~~s~ 354 (366)
T cd03822 332 LADPELAQALRARAREYARAMSW 354 (366)
T ss_pred HcChHHHHHHHHHHHHHHhhCCH
Confidence 457788899998887776544
No 11
>PLN02871 UDP-sulfoquinovose:DAG sulfoquinovosyltransferase
Probab=94.87 E-value=0.2 Score=54.02 Aligned_cols=95 Identities=19% Similarity=0.188 Sum_probs=67.7
Q ss_pred chhhhcccCCcEEEeeCCCCCCCchHHHHHhcCceeEEeeCCcccCccCCCCC---CcEEEEEeccccchhhh-HHHHHh
Q 011152 350 KNAGQGMASSKFCLNIAGDTPSSNRLFDAIASHCVPVIISDEIELPFEDVLDY---SEFCITVHSTDAIKKGF-LLNLLR 425 (492)
Q Consensus 350 ~~y~~~m~~S~FCL~P~Gd~~~s~RlfDAi~aGCIPViisd~~~LPF~dvlDw---~~fSV~I~e~dv~~~~~-l~~iL~ 425 (492)
++..+.|+.+..++.|......+.-++|||++| +|||.++.-- ..++++- .+..+.++..|...... |.++|.
T Consensus 323 ~ev~~~~~~aDv~V~pS~~E~~g~~vlEAmA~G-~PVI~s~~gg--~~eiv~~~~~~~~G~lv~~~d~~~la~~i~~ll~ 399 (465)
T PLN02871 323 DELSQAYASGDVFVMPSESETLGFVVLEAMASG-VPVVAARAGG--IPDIIPPDQEGKTGFLYTPGDVDDCVEKLETLLA 399 (465)
T ss_pred HHHHHHHHHCCEEEECCcccccCcHHHHHHHcC-CCEEEcCCCC--cHhhhhcCCCCCceEEeCCCCHHHHHHHHHHHHh
Confidence 467788999999999987776678899999999 8999887532 2334433 56677777777654221 333333
Q ss_pred CCCHHHHHHHHHHHHHHhhceEec
Q 011152 426 GIKQEQWTKMWERLKEVVQHFEYQ 449 (492)
Q Consensus 426 ~I~~~~i~~Mr~~l~~v~~~f~y~ 449 (492)
.++...+|.++.++....|.|.
T Consensus 400 --~~~~~~~~~~~a~~~~~~fsw~ 421 (465)
T PLN02871 400 --DPELRERMGAAAREEVEKWDWR 421 (465)
T ss_pred --CHHHHHHHHHHHHHHHHhCCHH
Confidence 5778889999988877766554
No 12
>cd03794 GT1_wbuB_like This family is most closely related to the GT1 family of glycosyltransferases. wbuB in E. coli is involved in the biosynthesis of the O26 O-antigen. It has been proposed to function as an N-acetyl-L-fucosamine (L-FucNAc) transferase.
Probab=94.73 E-value=0.062 Score=53.49 Aligned_cols=93 Identities=19% Similarity=0.243 Sum_probs=60.8
Q ss_pred chhhhcccCCcEEEeeCCCCCC-----CchHHHHHhcCceeEEeeCCcccCccCCCCCCcEEEEEeccccchhhhHHHHH
Q 011152 350 KNAGQGMASSKFCLNIAGDTPS-----SNRLFDAIASHCVPVIISDEIELPFEDVLDYSEFCITVHSTDAIKKGFLLNLL 424 (492)
Q Consensus 350 ~~y~~~m~~S~FCL~P~Gd~~~-----s~RlfDAi~aGCIPViisd~~~LPF~dvlDw~~fSV~I~e~dv~~~~~l~~iL 424 (492)
+++.+.|..+.++++|...+.. ...++|||.+|| |||..+.-..+ +.+.-......++..|+.+ +.+.|
T Consensus 286 ~~~~~~~~~~di~i~~~~~~~~~~~~~p~~~~Ea~~~G~-pvi~~~~~~~~--~~~~~~~~g~~~~~~~~~~---l~~~i 359 (394)
T cd03794 286 EELPELLAAADVGLVPLKPGPAFEGVSPSKLFEYMAAGK-PVLASVDGESA--ELVEEAGAGLVVPPGDPEA---LAAAI 359 (394)
T ss_pred HHHHHHHHhhCeeEEeccCcccccccCchHHHHHHHCCC-cEEEecCCCch--hhhccCCcceEeCCCCHHH---HHHHH
Confidence 4567889999999999776543 556899999996 88887654322 1222224555666555544 44333
Q ss_pred hCC--CHHHHHHHHHHHHHHhh-ceEe
Q 011152 425 RGI--KQEQWTKMWERLKEVVQ-HFEY 448 (492)
Q Consensus 425 ~~I--~~~~i~~Mr~~l~~v~~-~f~y 448 (492)
..+ .+++..+|.++.++... +|.|
T Consensus 360 ~~~~~~~~~~~~~~~~~~~~~~~~~s~ 386 (394)
T cd03794 360 LELLDDPEERAEMGENGRRYVEEKFSR 386 (394)
T ss_pred HHHHhChHHHHHHHHHHHHHHHHhhcH
Confidence 333 77888889888876554 5554
No 13
>cd03818 GT1_ExpC_like This family is most closely related to the GT1 family of glycosyltransferases. ExpC in Rhizobium meliloti has been shown to be involved in the biosynthesis of galactoglucan (exopolysaccharide II).
Probab=94.57 E-value=0.28 Score=51.35 Aligned_cols=94 Identities=17% Similarity=0.138 Sum_probs=62.7
Q ss_pred chhhhcccCCcEEEeeCCCCCCCchHHHHHhcCceeEEeeCCcccCccCCCCCCcEEEEEeccccchhh-hHHHHHhCCC
Q 011152 350 KNAGQGMASSKFCLNIAGDTPSSNRLFDAIASHCVPVIISDEIELPFEDVLDYSEFCITVHSTDAIKKG-FLLNLLRGIK 428 (492)
Q Consensus 350 ~~y~~~m~~S~FCL~P~Gd~~~s~RlfDAi~aGCIPViisd~~~LPF~dvlDw~~fSV~I~e~dv~~~~-~l~~iL~~I~ 428 (492)
+++.+.|..|..++.|.-....+..++|||++|| |||.++.- +..+++.-..-.+.++..|..... .|..+|. .
T Consensus 292 ~~~~~~l~~adv~v~~s~~e~~~~~llEAmA~G~-PVIas~~~--g~~e~i~~~~~G~lv~~~d~~~la~~i~~ll~--~ 366 (396)
T cd03818 292 DQYLALLQVSDVHVYLTYPFVLSWSLLEAMACGC-LVVGSDTA--PVREVITDGENGLLVDFFDPDALAAAVIELLD--D 366 (396)
T ss_pred HHHHHHHHhCcEEEEcCcccccchHHHHHHHCCC-CEEEcCCC--CchhhcccCCceEEcCCCCHHHHHHHHHHHHh--C
Confidence 4577888899988887654444668999999998 78887753 444666555556677766654421 1444443 4
Q ss_pred HHHHHHHHHHHHHHh-hceEe
Q 011152 429 QEQWTKMWERLKEVV-QHFEY 448 (492)
Q Consensus 429 ~~~i~~Mr~~l~~v~-~~f~y 448 (492)
+++..+|.++.++.. ++|.|
T Consensus 367 ~~~~~~l~~~ar~~~~~~fs~ 387 (396)
T cd03818 367 PARRARLRRAARRTALRYDLL 387 (396)
T ss_pred HHHHHHHHHHHHHHHHHhccH
Confidence 677888888887644 33554
No 14
>cd03806 GT1_ALG11_like This family is most closely related to the GT1 family of glycosyltransferases. ALG11 in yeast is involved in adding the final 1,2-linked Man to the Man5GlcNAc2-PP-Dol synthesized on the cytosolic face of the ER. The deletion analysis of ALG11 was shown to block the early steps of core biosynthesis that takes place on the cytoplasmic face of the ER and lead to a defect in the assembly of lipid-linked oligosaccharides.
Probab=94.17 E-value=0.46 Score=50.68 Aligned_cols=95 Identities=11% Similarity=0.147 Sum_probs=60.3
Q ss_pred chhhhcccCCcEEEeeCCCCCCCchHHHHHhcCceeEEeeCCcccCccCCCC---CCcEEEEEeccccchhh-hHHHHHh
Q 011152 350 KNAGQGMASSKFCLNIAGDTPSSNRLFDAIASHCVPVIISDEIELPFEDVLD---YSEFCITVHSTDAIKKG-FLLNLLR 425 (492)
Q Consensus 350 ~~y~~~m~~S~FCL~P~Gd~~~s~RlfDAi~aGCIPViisd~~~LPF~dvlD---w~~fSV~I~e~dv~~~~-~l~~iL~ 425 (492)
++..+.|+.|..++.|.=+...+..++|||++||.||. ++. -=|.++++. -..-.+.+. |..... .|.++|+
T Consensus 316 ~~l~~~l~~adv~v~~s~~E~Fgi~~lEAMa~G~pvIa-~~~-ggp~~~iv~~~~~g~~G~l~~--d~~~la~ai~~ll~ 391 (419)
T cd03806 316 EELLEELSTASIGLHTMWNEHFGIGVVEYMAAGLIPLA-HAS-GGPLLDIVVPWDGGPTGFLAS--TAEEYAEAIEKILS 391 (419)
T ss_pred HHHHHHHHhCeEEEECCccCCcccHHHHHHHcCCcEEE-EcC-CCCchheeeccCCCCceEEeC--CHHHHHHHHHHHHh
Confidence 56778899999999987666667889999999997664 442 125566553 222333332 332211 2444444
Q ss_pred CCCHHHHHHHHHHHHHHhhceEec
Q 011152 426 GIKQEQWTKMWERLKEVVQHFEYQ 449 (492)
Q Consensus 426 ~I~~~~i~~Mr~~l~~v~~~f~y~ 449 (492)
.++++...|+++.+++..+|.+.
T Consensus 392 -~~~~~~~~~~~~~~~~~~~fs~~ 414 (419)
T cd03806 392 -LSEEERLRIRRAARSSVKRFSDE 414 (419)
T ss_pred -CCHHHHHHHHHHHHHHHHhhCHH
Confidence 36666677888877887777653
No 15
>cd03819 GT1_WavL_like This family is most closely related to the GT1 family of glycosyltransferases. WavL in Vibrio cholerae has been shown to be involved in the biosynthesis of the lipopolysaccharide core.
Probab=94.13 E-value=0.13 Score=51.69 Aligned_cols=93 Identities=22% Similarity=0.216 Sum_probs=62.9
Q ss_pred chhhhcccCCcEEEeeC-CCCCCCchHHHHHhcCceeEEeeCCcccCccCCCCCCcEEEEEeccccchhhhHHHHH---h
Q 011152 350 KNAGQGMASSKFCLNIA-GDTPSSNRLFDAIASHCVPVIISDEIELPFEDVLDYSEFCITVHSTDAIKKGFLLNLL---R 425 (492)
Q Consensus 350 ~~y~~~m~~S~FCL~P~-Gd~~~s~RlfDAi~aGCIPViisd~~~LPF~dvlDw~~fSV~I~e~dv~~~~~l~~iL---~ 425 (492)
.+..+.|+.|..++.|. -.......++|||++|| |||..+.- +..+++.-....+.++..|+.. +.+.| .
T Consensus 255 ~~~~~~l~~ad~~i~ps~~~e~~~~~l~EA~a~G~-PvI~~~~~--~~~e~i~~~~~g~~~~~~~~~~---l~~~i~~~~ 328 (355)
T cd03819 255 SDMPAAYALADIVVSASTEPEAFGRTAVEAQAMGR-PVIASDHG--GARETVRPGETGLLVPPGDAEA---LAQALDQIL 328 (355)
T ss_pred ccHHHHHHhCCEEEecCCCCCCCchHHHHHHhcCC-CEEEcCCC--CcHHHHhCCCceEEeCCCCHHH---HHHHHHHHH
Confidence 45778899999999986 33344678999999999 77777642 3455555554566677666654 43333 3
Q ss_pred CCCHHHHHHHHHHHHHHh-hceEe
Q 011152 426 GIKQEQWTKMWERLKEVV-QHFEY 448 (492)
Q Consensus 426 ~I~~~~i~~Mr~~l~~v~-~~f~y 448 (492)
..++++..+|.++.++.. .+|.|
T Consensus 329 ~~~~~~~~~~~~~a~~~~~~~f~~ 352 (355)
T cd03819 329 SLLPEGRAKMFAKARMCVETLFSY 352 (355)
T ss_pred hhCHHHHHHHHHHHHHHHHHhhhh
Confidence 347888888998887754 44443
No 16
>TIGR03088 stp2 sugar transferase, PEP-CTERM/EpsH1 system associated. Members of this family include a match to the pfam00534 Glycosyl transferases group 1 domain. Nearly all are found in species that encode the PEP-CTERM/exosortase system predicted to act in protein sorting in a number of Gram-negative bacteria. In particular, these transferases are found proximal to a particular variant of exosortase, EpsH1, which appears to travel with a conserved group of genes summarized by Genome Property GenProp0652. The nature of the sugar transferase reaction catalyzed by members of this clade is unknown and may conceivably be variable with respect to substrate by species, but we hypothesize a conserved substrate.
Probab=94.11 E-value=0.5 Score=48.61 Aligned_cols=94 Identities=16% Similarity=0.072 Sum_probs=61.6
Q ss_pred chhhhcccCCcEEEeeCCCCCCCchHHHHHhcCceeEEeeCCcccCccCCCCCCcEEEEEeccccchhh-hHHHHHhCCC
Q 011152 350 KNAGQGMASSKFCLNIAGDTPSSNRLFDAIASHCVPVIISDEIELPFEDVLDYSEFCITVHSTDAIKKG-FLLNLLRGIK 428 (492)
Q Consensus 350 ~~y~~~m~~S~FCL~P~Gd~~~s~RlfDAi~aGCIPViisd~~~LPF~dvlDw~~fSV~I~e~dv~~~~-~l~~iL~~I~ 428 (492)
.+..+.|+.+..+++|.-.......++|||++|+ |||.+|.-. ..+++.-......++..|..+.. .|..++. .
T Consensus 264 ~~~~~~~~~adi~v~pS~~Eg~~~~~lEAma~G~-Pvv~s~~~g--~~e~i~~~~~g~~~~~~d~~~la~~i~~l~~--~ 338 (374)
T TIGR03088 264 DDVPALMQALDLFVLPSLAEGISNTILEAMASGL-PVIATAVGG--NPELVQHGVTGALVPPGDAVALARALQPYVS--D 338 (374)
T ss_pred CCHHHHHHhcCEEEeccccccCchHHHHHHHcCC-CEEEcCCCC--cHHHhcCCCceEEeCCCCHHHHHHHHHHHHh--C
Confidence 4567788899998888655556788999999996 999988532 23455545566777766654411 1333333 4
Q ss_pred HHHHHHHHHHHHHH-hhceEe
Q 011152 429 QEQWTKMWERLKEV-VQHFEY 448 (492)
Q Consensus 429 ~~~i~~Mr~~l~~v-~~~f~y 448 (492)
+++..+|.++.++. ...|.|
T Consensus 339 ~~~~~~~~~~a~~~~~~~fs~ 359 (374)
T TIGR03088 339 PAARRAHGAAGRARAEQQFSI 359 (374)
T ss_pred HHHHHHHHHHHHHHHHHhCCH
Confidence 66677777776654 355554
No 17
>cd03808 GT1_cap1E_like This family is most closely related to the GT1 family of glycosyltransferases. cap1E in Streptococcus pneumoniae is required for the synthesis of type 1 capsular polysaccharides.
Probab=93.59 E-value=0.16 Score=50.00 Aligned_cols=92 Identities=16% Similarity=0.147 Sum_probs=59.4
Q ss_pred chhhhcccCCcEEEeeCCCCCCCchHHHHHhcCceeEEeeCCcccCccCCCCCCcEEEEEeccccchhhhHHHHHhCC--
Q 011152 350 KNAGQGMASSKFCLNIAGDTPSSNRLFDAIASHCVPVIISDEIELPFEDVLDYSEFCITVHSTDAIKKGFLLNLLRGI-- 427 (492)
Q Consensus 350 ~~y~~~m~~S~FCL~P~Gd~~~s~RlfDAi~aGCIPViisd~~~LPF~dvlDw~~fSV~I~e~dv~~~~~l~~iL~~I-- 427 (492)
++..+.|+.+.+++.|......+..++|||.+|| |||.++.-.. .+.+.=....+.++..|..+ +.+.+..+
T Consensus 255 ~~~~~~~~~adi~i~ps~~e~~~~~~~Ea~~~G~-Pvi~s~~~~~--~~~i~~~~~g~~~~~~~~~~---~~~~i~~l~~ 328 (359)
T cd03808 255 DDVPELLAAADVFVLPSYREGLPRVLLEAMAMGR-PVIATDVPGC--REAVIDGVNGFLVPPGDAEA---LADAIERLIE 328 (359)
T ss_pred ccHHHHHHhccEEEecCcccCcchHHHHHHHcCC-CEEEecCCCc--hhhhhcCcceEEECCCCHHH---HHHHHHHHHh
Confidence 3566789999999999876666888999999995 7788765322 23333234456666665543 33333322
Q ss_pred CHHHHHHHHHHHHHH-hhceE
Q 011152 428 KQEQWTKMWERLKEV-VQHFE 447 (492)
Q Consensus 428 ~~~~i~~Mr~~l~~v-~~~f~ 447 (492)
.++...+|.++.++. ..+|.
T Consensus 329 ~~~~~~~~~~~~~~~~~~~~s 349 (359)
T cd03808 329 DPELRARMGQAARKRAEEEFD 349 (359)
T ss_pred CHHHHHHHHHHHHHHHHHhcC
Confidence 567777777776664 45543
No 18
>PRK09814 beta-1,6-galactofuranosyltransferase; Provisional
Probab=93.33 E-value=0.11 Score=53.52 Aligned_cols=89 Identities=20% Similarity=0.341 Sum_probs=63.0
Q ss_pred chhhhcccCCcEEEeeCCCC-----------CCCchHHHHHhcCceeEEeeCCcccCccCCCCCCcEEEEEeccccchhh
Q 011152 350 KNAGQGMASSKFCLNIAGDT-----------PSSNRLFDAIASHCVPVIISDEIELPFEDVLDYSEFCITVHSTDAIKKG 418 (492)
Q Consensus 350 ~~y~~~m~~S~FCL~P~Gd~-----------~~s~RlfDAi~aGCIPViisd~~~LPF~dvlDw~~fSV~I~e~dv~~~~ 418 (492)
++..+.|.. .|+|++.+++ .....++++|++| +|||.++.-.++ +++.-....+.++ ++.+
T Consensus 218 eel~~~l~~-~~gLv~~~~~~~~~~~~y~~~~~P~K~~~ymA~G-~PVI~~~~~~~~--~~V~~~~~G~~v~--~~~e-- 289 (333)
T PRK09814 218 EELPNELSK-GFGLVWDGDTNDGEYGEYYKYNNPHKLSLYLAAG-LPVIVWSKAAIA--DFIVENGLGFVVD--SLEE-- 289 (333)
T ss_pred HHHHHHHhc-CcCeEEcCCCCCccchhhhhccchHHHHHHHHCC-CCEEECCCccHH--HHHHhCCceEEeC--CHHH--
Confidence 344555655 9999988762 1234588999998 699998764433 3444455566665 3323
Q ss_pred hHHHHHhCCCHHHHHHHHHHHHHHhhceE
Q 011152 419 FLLNLLRGIKQEQWTKMWERLKEVVQHFE 447 (492)
Q Consensus 419 ~l~~iL~~I~~~~i~~Mr~~l~~v~~~f~ 447 (492)
+.+.|..++++++.+|+++.+++.+.+-
T Consensus 290 -l~~~l~~~~~~~~~~m~~n~~~~~~~~~ 317 (333)
T PRK09814 290 -LPEIIDNITEEEYQEMVENVKKISKLLR 317 (333)
T ss_pred -HHHHHHhcCHHHHHHHHHHHHHHHHHHh
Confidence 7888888999999999999999888764
No 19
>cd04962 GT1_like_5 This family is most closely related to the GT1 family of glycosyltransferases. Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homolog
Probab=93.21 E-value=0.21 Score=50.88 Aligned_cols=94 Identities=18% Similarity=0.237 Sum_probs=62.6
Q ss_pred chhhhcccCCcEEEeeCCCCCCCchHHHHHhcCceeEEeeCCcccCccCCCCCCcEEEEEeccccchhhh-HHHHHhCCC
Q 011152 350 KNAGQGMASSKFCLNIAGDTPSSNRLFDAIASHCVPVIISDEIELPFEDVLDYSEFCITVHSTDAIKKGF-LLNLLRGIK 428 (492)
Q Consensus 350 ~~y~~~m~~S~FCL~P~Gd~~~s~RlfDAi~aGCIPViisd~~~LPF~dvlDw~~fSV~I~e~dv~~~~~-l~~iL~~I~ 428 (492)
.+..+.|..+..++.|.-.......+.|||.+| +|||.++.-. ..+++.-..-...++..|+.+... +.+++. .
T Consensus 262 ~~~~~~~~~~d~~v~ps~~E~~~~~~~EAma~g-~PvI~s~~~~--~~e~i~~~~~G~~~~~~~~~~l~~~i~~l~~--~ 336 (371)
T cd04962 262 DHVEELLSIADLFLLPSEKESFGLAALEAMACG-VPVVASNAGG--IPEVVKHGETGFLVDVGDVEAMAEYALSLLE--D 336 (371)
T ss_pred ccHHHHHHhcCEEEeCCCcCCCccHHHHHHHcC-CCEEEeCCCC--chhhhcCCCceEEcCCCCHHHHHHHHHHHHh--C
Confidence 356788999999999975555677899999999 7888887643 234444434445566555543111 333332 6
Q ss_pred HHHHHHHHHHHHHH-hhceEe
Q 011152 429 QEQWTKMWERLKEV-VQHFEY 448 (492)
Q Consensus 429 ~~~i~~Mr~~l~~v-~~~f~y 448 (492)
++...+|+++.++. ..+|.+
T Consensus 337 ~~~~~~~~~~~~~~~~~~fs~ 357 (371)
T cd04962 337 DELWQEFSRAARNRAAERFDS 357 (371)
T ss_pred HHHHHHHHHHHHHHHHHhCCH
Confidence 78889999988875 556554
No 20
>cd05844 GT1_like_7 Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homology. The large cleft that separates the two domains includes the catalytic center
Probab=93.20 E-value=0.84 Score=46.30 Aligned_cols=94 Identities=18% Similarity=0.180 Sum_probs=59.9
Q ss_pred chhhhcccCCcEEEeeCCC------CCCCchHHHHHhcCceeEEeeCCcccCccCCCCCCcEEEEEeccccchhh-hHHH
Q 011152 350 KNAGQGMASSKFCLNIAGD------TPSSNRLFDAIASHCVPVIISDEIELPFEDVLDYSEFCITVHSTDAIKKG-FLLN 422 (492)
Q Consensus 350 ~~y~~~m~~S~FCL~P~Gd------~~~s~RlfDAi~aGCIPViisd~~~LPF~dvlDw~~fSV~I~e~dv~~~~-~l~~ 422 (492)
++..+.|..+...+.|.-. ......++|||++|| |||.++.-.. .+++.-....+.++..|+.+.. .|.+
T Consensus 256 ~~l~~~~~~ad~~v~ps~~~~~~~~E~~~~~~~EA~a~G~-PvI~s~~~~~--~e~i~~~~~g~~~~~~d~~~l~~~i~~ 332 (367)
T cd05844 256 AEVRELMRRARIFLQPSVTAPSGDAEGLPVVLLEAQASGV-PVVATRHGGI--PEAVEDGETGLLVPEGDVAALAAALGR 332 (367)
T ss_pred HHHHHHHHhCCEEEECcccCCCCCccCCchHHHHHHHcCC-CEEEeCCCCc--hhheecCCeeEEECCCCHHHHHHHHHH
Confidence 3566778889988887532 123678999999996 9998886432 3444444566777766654411 1333
Q ss_pred HHhCCCHHHHHHHHHHHHH-HhhceEe
Q 011152 423 LLRGIKQEQWTKMWERLKE-VVQHFEY 448 (492)
Q Consensus 423 iL~~I~~~~i~~Mr~~l~~-v~~~f~y 448 (492)
++. +++...+|.++.++ +.++|.|
T Consensus 333 l~~--~~~~~~~~~~~a~~~~~~~~s~ 357 (367)
T cd05844 333 LLA--DPDLRARMGAAGRRRVEERFDL 357 (367)
T ss_pred HHc--CHHHHHHHHHHHHHHHHHHCCH
Confidence 333 56678888887766 4456655
No 21
>cd03800 GT1_Sucrose_synthase This family is most closely related to the GT1 family of glycosyltransferases. The sucrose-phosphate synthases in this family may be unique to plants and photosynthetic bacteria. This enzyme catalyzes the synthesis of sucrose 6-phosphate from fructose 6-phosphate and uridine 5'-diphosphate-glucose, a key regulatory step of sucrose metabolism. The activity of this enzyme is regulated by phosphorylation and moderated by the concentration of various metabolites and light.
Probab=93.05 E-value=0.15 Score=52.16 Aligned_cols=93 Identities=14% Similarity=0.083 Sum_probs=62.3
Q ss_pred hhhhcccCCcEEEeeCCCCCCCchHHHHHhcCceeEEeeCCcccCccCCCCCCcEEEEEeccccchhh-hHHHHHhCCCH
Q 011152 351 NAGQGMASSKFCLNIAGDTPSSNRLFDAIASHCVPVIISDEIELPFEDVLDYSEFCITVHSTDAIKKG-FLLNLLRGIKQ 429 (492)
Q Consensus 351 ~y~~~m~~S~FCL~P~Gd~~~s~RlfDAi~aGCIPViisd~~~LPF~dvlDw~~fSV~I~e~dv~~~~-~l~~iL~~I~~ 429 (492)
+..+.+..|..+++|.-.......++|||++| +|||.++.- ...+++.-....+.++..|..+.. .|.+++. .+
T Consensus 295 ~~~~~~~~adi~l~ps~~e~~~~~l~Ea~a~G-~Pvi~s~~~--~~~e~i~~~~~g~~~~~~~~~~l~~~i~~l~~--~~ 369 (398)
T cd03800 295 DLPALYRAADVFVNPALYEPFGLTALEAMACG-LPVVATAVG--GPRDIVVDGVTGLLVDPRDPEALAAALRRLLT--DP 369 (398)
T ss_pred HHHHHHHhCCEEEecccccccCcHHHHHHhcC-CCEEECCCC--CHHHHccCCCCeEEeCCCCHHHHHHHHHHHHh--CH
Confidence 45677889999999976666677899999999 599988743 233344434456667666544311 1333333 47
Q ss_pred HHHHHHHHHHHHHh-hceEe
Q 011152 430 EQWTKMWERLKEVV-QHFEY 448 (492)
Q Consensus 430 ~~i~~Mr~~l~~v~-~~f~y 448 (492)
++..+|.++.++.. ++|.|
T Consensus 370 ~~~~~~~~~a~~~~~~~~s~ 389 (398)
T cd03800 370 ALRRRLSRAGLRRARARYTW 389 (398)
T ss_pred HHHHHHHHHHHHHHHHhCCH
Confidence 78888988887654 66655
No 22
>PRK15427 colanic acid biosynthesis glycosyltransferase WcaL; Provisional
Probab=93.04 E-value=1.5 Score=46.50 Aligned_cols=92 Identities=17% Similarity=0.225 Sum_probs=62.3
Q ss_pred chhhhcccCCcEEEeeCC-------CCCCCchHHHHHhcCceeEEeeCCcccCccCCCCCCcEEEEEeccccchhhhHHH
Q 011152 350 KNAGQGMASSKFCLNIAG-------DTPSSNRLFDAIASHCVPVIISDEIELPFEDVLDYSEFCITVHSTDAIKKGFLLN 422 (492)
Q Consensus 350 ~~y~~~m~~S~FCL~P~G-------d~~~s~RlfDAi~aGCIPViisd~~~LPF~dvlDw~~fSV~I~e~dv~~~~~l~~ 422 (492)
++..+.|+.+..++.|.= ++ ...-+.|||.+|| |||.++.--.| +++.-..-.+.+++.|... +.+
T Consensus 290 ~el~~~l~~aDv~v~pS~~~~~g~~Eg-~p~~llEAma~G~-PVI~t~~~g~~--E~v~~~~~G~lv~~~d~~~---la~ 362 (406)
T PRK15427 290 HEVKAMLDDADVFLLPSVTGADGDMEG-IPVALMEAMAVGI-PVVSTLHSGIP--ELVEADKSGWLVPENDAQA---LAQ 362 (406)
T ss_pred HHHHHHHHhCCEEEECCccCCCCCccC-ccHHHHHHHhCCC-CEEEeCCCCch--hhhcCCCceEEeCCCCHHH---HHH
Confidence 456788999999999852 22 3567999999995 99998754333 4454445566778777655 433
Q ss_pred HHh---CCCHHHHHHHHHHHHH-HhhceEe
Q 011152 423 LLR---GIKQEQWTKMWERLKE-VVQHFEY 448 (492)
Q Consensus 423 iL~---~I~~~~i~~Mr~~l~~-v~~~f~y 448 (492)
.|. ..++++..+|.++.++ +...|.+
T Consensus 363 ai~~l~~~d~~~~~~~~~~ar~~v~~~f~~ 392 (406)
T PRK15427 363 RLAAFSQLDTDELAPVVKRAREKVETDFNQ 392 (406)
T ss_pred HHHHHHhCCHHHHHHHHHHHHHHHHHhcCH
Confidence 333 3367888899988876 4455554
No 23
>cd03823 GT1_ExpE7_like This family is most closely related to the GT1 family of glycosyltransferases. ExpE7 in Sinorhizobium meliloti has been shown to be involved in the biosynthesis of galactoglucans (exopolysaccharide II).
Probab=92.84 E-value=0.27 Score=48.80 Aligned_cols=89 Identities=15% Similarity=0.065 Sum_probs=59.5
Q ss_pred chhhhcccCCcEEEeeCC-CCCCCchHHHHHhcCceeEEeeCCcccCccCCCCCCcEEEEEeccccchhh-hHHHHHhCC
Q 011152 350 KNAGQGMASSKFCLNIAG-DTPSSNRLFDAIASHCVPVIISDEIELPFEDVLDYSEFCITVHSTDAIKKG-FLLNLLRGI 427 (492)
Q Consensus 350 ~~y~~~m~~S~FCL~P~G-d~~~s~RlfDAi~aGCIPViisd~~~LPF~dvlDw~~fSV~I~e~dv~~~~-~l~~iL~~I 427 (492)
++..+.+..+..+++|.- .......++|||.+| +|||.++.- ...++++.....+.++..|+.+.. .+.+++.
T Consensus 254 ~~~~~~~~~ad~~i~ps~~~e~~~~~~~Ea~a~G-~Pvi~~~~~--~~~e~i~~~~~g~~~~~~d~~~l~~~i~~l~~-- 328 (359)
T cd03823 254 EEIDDFYAEIDVLVVPSIWPENFPLVIREALAAG-VPVIASDIG--GMAELVRDGVNGLLFPPGDAEDLAAALERLID-- 328 (359)
T ss_pred HHHHHHHHhCCEEEEcCcccCCCChHHHHHHHCC-CCEEECCCC--CHHHHhcCCCcEEEECCCCHHHHHHHHHHHHh--
Confidence 466778999999999963 344577899999999 677777642 233445555567777777654422 1334444
Q ss_pred CHHHHHHHHHHHHHHh
Q 011152 428 KQEQWTKMWERLKEVV 443 (492)
Q Consensus 428 ~~~~i~~Mr~~l~~v~ 443 (492)
.++...+|+++.++..
T Consensus 329 ~~~~~~~~~~~~~~~~ 344 (359)
T cd03823 329 DPDLLERLRAGIEPPR 344 (359)
T ss_pred ChHHHHHHHHhHHHhh
Confidence 6777888888776543
No 24
>cd03809 GT1_mtfB_like This family is most closely related to the GT1 family of glycosyltransferases. mtfB (mannosyltransferase B) in E. coli has been shown to direct the growth of the O9-specific polysaccharide chain. It transfers two mannoses into the position 3 of the previously synthesized polysaccharide.
Probab=92.84 E-value=0.16 Score=50.76 Aligned_cols=92 Identities=13% Similarity=0.112 Sum_probs=60.9
Q ss_pred chhhhcccCCcEEEeeCCCCCCCchHHHHHhcCceeEEeeCCcccCccCCCCCCcEEEEEeccccchhhhHHHHHhC--C
Q 011152 350 KNAGQGMASSKFCLNIAGDTPSSNRLFDAIASHCVPVIISDEIELPFEDVLDYSEFCITVHSTDAIKKGFLLNLLRG--I 427 (492)
Q Consensus 350 ~~y~~~m~~S~FCL~P~Gd~~~s~RlfDAi~aGCIPViisd~~~LPF~dvlDw~~fSV~I~e~dv~~~~~l~~iL~~--I 427 (492)
.++.+.+..+.+++.|.-....+..++|||++|| |||.++.-. ..++++ +..+.++..+..+ +.+.|.. -
T Consensus 264 ~~~~~~~~~~d~~l~ps~~e~~~~~~~Ea~a~G~-pvI~~~~~~--~~e~~~--~~~~~~~~~~~~~---~~~~i~~l~~ 335 (365)
T cd03809 264 EELAALYRGARAFVFPSLYEGFGLPVLEAMACGT-PVIASNISS--LPEVAG--DAALYFDPLDPEA---LAAAIERLLE 335 (365)
T ss_pred hHHHHHHhhhhhhcccchhccCCCCHHHHhcCCC-cEEecCCCC--ccceec--CceeeeCCCCHHH---HHHHHHHHhc
Confidence 4567889999999998654445677999999996 777776422 223332 3455566555444 4333333 2
Q ss_pred CHHHHHHHHHHHHHHhhceEec
Q 011152 428 KQEQWTKMWERLKEVVQHFEYQ 449 (492)
Q Consensus 428 ~~~~i~~Mr~~l~~v~~~f~y~ 449 (492)
.++...+|.++.+++...+.|.
T Consensus 336 ~~~~~~~~~~~~~~~~~~~sw~ 357 (365)
T cd03809 336 DPALREELRERGLARAKRFSWE 357 (365)
T ss_pred CHHHHHHHHHHHHHHHHhCCHH
Confidence 6777888888888777776653
No 25
>TIGR03449 mycothiol_MshA UDP-N-acetylglucosamine: 1L-myo-inositol-1-phosphate 1-alpha-D-N-acetylglucosaminyltransferase. Members of this protein family, found exclusively in the Actinobacteria, are MshA, the glycosyltransferase of mycothiol biosynthesis. Mycothiol replaces glutathione in these species.
Probab=92.65 E-value=0.3 Score=50.92 Aligned_cols=95 Identities=15% Similarity=0.068 Sum_probs=63.4
Q ss_pred chhhhcccCCcEEEeeCCCCCCCchHHHHHhcCceeEEeeCCcccCccCCCCCCcEEEEEeccccchhh-hHHHHHhCCC
Q 011152 350 KNAGQGMASSKFCLNIAGDTPSSNRLFDAIASHCVPVIISDEIELPFEDVLDYSEFCITVHSTDAIKKG-FLLNLLRGIK 428 (492)
Q Consensus 350 ~~y~~~m~~S~FCL~P~Gd~~~s~RlfDAi~aGCIPViisd~~~LPF~dvlDw~~fSV~I~e~dv~~~~-~l~~iL~~I~ 428 (492)
++..+.|+.+..++.|.=.......+.|||++|| |||..+.--. .+++.=....+.++..|..... .|.++|. .
T Consensus 294 ~~~~~~l~~ad~~v~ps~~E~~g~~~lEAma~G~-Pvi~~~~~~~--~e~i~~~~~g~~~~~~d~~~la~~i~~~l~--~ 368 (405)
T TIGR03449 294 EELVHVYRAADVVAVPSYNESFGLVAMEAQACGT-PVVAARVGGL--PVAVADGETGLLVDGHDPADWADALARLLD--D 368 (405)
T ss_pred HHHHHHHHhCCEEEECCCCCCcChHHHHHHHcCC-CEEEecCCCc--HhhhccCCceEECCCCCHHHHHHHHHHHHh--C
Confidence 4567789999998888644445678999999996 8888875322 2344334455667766654421 1344443 5
Q ss_pred HHHHHHHHHHHHHHhhceEec
Q 011152 429 QEQWTKMWERLKEVVQHFEYQ 449 (492)
Q Consensus 429 ~~~i~~Mr~~l~~v~~~f~y~ 449 (492)
++...+|.++.++..+.|.|.
T Consensus 369 ~~~~~~~~~~~~~~~~~fsw~ 389 (405)
T TIGR03449 369 PRTRIRMGAAAVEHAAGFSWA 389 (405)
T ss_pred HHHHHHHHHHHHHHHHhCCHH
Confidence 677889999888877776664
No 26
>cd03821 GT1_Bme6_like This family is most closely related to the GT1 family of glycosyltransferases. Bme6 in Brucella melitensis has been shown to be involved in the biosynthesis of a polysaccharide.
Probab=92.05 E-value=0.34 Score=48.02 Aligned_cols=91 Identities=14% Similarity=0.243 Sum_probs=57.3
Q ss_pred hhhhcccCCcEEEeeCCCCCCCchHHHHHhcCceeEEeeCCcccCccCCCCCCcEEEEEeccccchhh-hHHHHHhCCCH
Q 011152 351 NAGQGMASSKFCLNIAGDTPSSNRLFDAIASHCVPVIISDEIELPFEDVLDYSEFCITVHSTDAIKKG-FLLNLLRGIKQ 429 (492)
Q Consensus 351 ~y~~~m~~S~FCL~P~Gd~~~s~RlfDAi~aGCIPViisd~~~LPF~dvlDw~~fSV~I~e~dv~~~~-~l~~iL~~I~~ 429 (492)
+..+.+..+.++++|.-....+..++|||++|| |||.++.-- ..+++.- ...+.++.+ ..+.. .|..++. .+
T Consensus 274 ~~~~~~~~adv~v~ps~~e~~~~~~~Eama~G~-PvI~~~~~~--~~~~~~~-~~~~~~~~~-~~~~~~~i~~l~~--~~ 346 (375)
T cd03821 274 DKAAALADADLFVLPSHSENFGIVVAEALACGT-PVVTTDKVP--WQELIEY-GCGWVVDDD-VDALAAALRRALE--LP 346 (375)
T ss_pred HHHHHHhhCCEEEeccccCCCCcHHHHHHhcCC-CEEEcCCCC--HHHHhhc-CceEEeCCC-hHHHHHHHHHHHh--CH
Confidence 566778999999999876666788999999996 888877532 2232322 444444433 22211 1333332 34
Q ss_pred HHHHHHHHHHHHH-hhceEe
Q 011152 430 EQWTKMWERLKEV-VQHFEY 448 (492)
Q Consensus 430 ~~i~~Mr~~l~~v-~~~f~y 448 (492)
++..+|.++.++. .+.|.|
T Consensus 347 ~~~~~~~~~~~~~~~~~~s~ 366 (375)
T cd03821 347 QRLKAMGENGRALVEERFSW 366 (375)
T ss_pred HHHHHHHHHHHHHHHHhcCH
Confidence 7788888888776 566554
No 27
>cd03798 GT1_wlbH_like This family is most closely related to the GT1 family of glycosyltransferases. wlbH in Bordetella parapertussis has been shown to be required for the biosynthesis of a trisaccharide that, when attached to the B. pertussis lipopolysaccharide (LPS) core (band B), generates band A LPS.
Probab=91.71 E-value=0.44 Score=46.89 Aligned_cols=93 Identities=16% Similarity=0.130 Sum_probs=55.8
Q ss_pred chhhhcccCCcEEEeeCCCCCCCchHHHHHhcCceeEEeeCCcccCccCCCCCCcEEEEEeccccchhh-hHHHHHhCCC
Q 011152 350 KNAGQGMASSKFCLNIAGDTPSSNRLFDAIASHCVPVIISDEIELPFEDVLDYSEFCITVHSTDAIKKG-FLLNLLRGIK 428 (492)
Q Consensus 350 ~~y~~~m~~S~FCL~P~Gd~~~s~RlfDAi~aGCIPViisd~~~LPF~dvlDw~~fSV~I~e~dv~~~~-~l~~iL~~I~ 428 (492)
.+..+.+.++.++++|......+..++|||.+|| |||.++.-.. .+.+.-....+.+...|..+.. .|.+++.. +
T Consensus 270 ~~~~~~~~~ad~~i~~~~~~~~~~~~~Ea~~~G~-pvI~~~~~~~--~~~~~~~~~g~~~~~~~~~~l~~~i~~~~~~-~ 345 (377)
T cd03798 270 EEVPAYYAAADVFVLPSLREGFGLVLLEAMACGL-PVVATDVGGI--PEIITDGENGLLVPPGDPEALAEAILRLLAD-P 345 (377)
T ss_pred HHHHHHHHhcCeeecchhhccCChHHHHHHhcCC-CEEEecCCCh--HHHhcCCcceeEECCCCHHHHHHHHHHHhcC-c
Confidence 4567889999999999876667888999999998 6777764322 2233333434566656654311 13333332 2
Q ss_pred HHHHHHHHHHHHHHhhceEe
Q 011152 429 QEQWTKMWERLKEVVQHFEY 448 (492)
Q Consensus 429 ~~~i~~Mr~~l~~v~~~f~y 448 (492)
+. ...++....+.+.+.|
T Consensus 346 -~~-~~~~~~~~~~~~~~s~ 363 (377)
T cd03798 346 -WL-RLGRAARRRVAERFSW 363 (377)
T ss_pred -HH-HHhHHHHHHHHHHhhH
Confidence 22 3444444556666655
No 28
>cd04951 GT1_WbdM_like This family is most closely related to the GT1 family of glycosyltransferases and is named after WbdM in Escherichia coli. In general glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have
Probab=91.42 E-value=1.7 Score=43.50 Aligned_cols=92 Identities=15% Similarity=0.159 Sum_probs=55.5
Q ss_pred hhhhcccCCcEEEeeCCCCCCCchHHHHHhcCceeEEeeCCcccCccCCCCCCcEEEEEeccccchhhh-HHHHHhCCCH
Q 011152 351 NAGQGMASSKFCLNIAGDTPSSNRLFDAIASHCVPVIISDEIELPFEDVLDYSEFCITVHSTDAIKKGF-LLNLLRGIKQ 429 (492)
Q Consensus 351 ~y~~~m~~S~FCL~P~Gd~~~s~RlfDAi~aGCIPViisd~~~LPF~dvlDw~~fSV~I~e~dv~~~~~-l~~iL~~I~~ 429 (492)
+..+.|..+.+.+.|.........++|||.+|| |||.+|.-.. .+++.-. ...++..|+..... +.++| ..++
T Consensus 255 ~~~~~~~~ad~~v~~s~~e~~~~~~~Ea~a~G~-PvI~~~~~~~--~e~i~~~--g~~~~~~~~~~~~~~i~~ll-~~~~ 328 (360)
T cd04951 255 DIAAYYNAADLFVLSSAWEGFGLVVAEAMACEL-PVVATDAGGV--REVVGDS--GLIVPISDPEALANKIDEIL-KMSG 328 (360)
T ss_pred cHHHHHHhhceEEecccccCCChHHHHHHHcCC-CEEEecCCCh--hhEecCC--ceEeCCCCHHHHHHHHHHHH-hCCH
Confidence 456778899999998876666788999999999 8888764221 2222212 33444455443221 33333 2356
Q ss_pred HHHHHHHHHHHHHhhceEe
Q 011152 430 EQWTKMWERLKEVVQHFEY 448 (492)
Q Consensus 430 ~~i~~Mr~~l~~v~~~f~y 448 (492)
+....|.+....+.+.|.|
T Consensus 329 ~~~~~~~~~~~~~~~~~s~ 347 (360)
T cd04951 329 EERDIIGARRERIVKKFSI 347 (360)
T ss_pred HHHHHHHHHHHHHHHhcCH
Confidence 6666666663445555554
No 29
>cd03792 GT1_Trehalose_phosphorylase Trehalose phosphorylase (TP) reversibly catalyzes trehalose synthesis and degradation from alpha-glucose-1-phosphate (alpha-Glc-1-P) and glucose. The catalyzing activity includes the phosphorolysis of trehalose, which produce alpha-Glc-1-P and glucose, and the subsequent synthesis of trehalose. This family is most closely related to the GT1 family of glycosyltransferases.
Probab=90.82 E-value=3.5 Score=42.58 Aligned_cols=94 Identities=19% Similarity=0.120 Sum_probs=60.3
Q ss_pred chhhhcccCCcEEEeeCCCCCCCchHHHHHhcCceeEEeeCCcccCccCCCCCCcEEEEEeccccchhhhHHHHHhCCCH
Q 011152 350 KNAGQGMASSKFCLNIAGDTPSSNRLFDAIASHCVPVIISDEIELPFEDVLDYSEFCITVHSTDAIKKGFLLNLLRGIKQ 429 (492)
Q Consensus 350 ~~y~~~m~~S~FCL~P~Gd~~~s~RlfDAi~aGCIPViisd~~~LPF~dvlDw~~fSV~I~e~dv~~~~~l~~iL~~I~~ 429 (492)
++..+.++.+..++.|.........+.|||++| +|||.++.-.++ +++.-....+.++..|... ..|...|. ++
T Consensus 265 ~~~~~~~~~ad~~v~~s~~Eg~g~~~lEA~a~G-~Pvv~s~~~~~~--~~i~~~~~g~~~~~~~~~a-~~i~~ll~--~~ 338 (372)
T cd03792 265 LEVNALQRASTVVLQKSIREGFGLTVTEALWKG-KPVIAGPVGGIP--LQIEDGETGFLVDTVEEAA-VRILYLLR--DP 338 (372)
T ss_pred HHHHHHHHhCeEEEeCCCccCCCHHHHHHHHcC-CCEEEcCCCCch--hhcccCCceEEeCCcHHHH-HHHHHHHc--CH
Confidence 456678889999998876665678999999999 699998754333 3332233333444322111 12444444 57
Q ss_pred HHHHHHHHHHHHH-hhceEec
Q 011152 430 EQWTKMWERLKEV-VQHFEYQ 449 (492)
Q Consensus 430 ~~i~~Mr~~l~~v-~~~f~y~ 449 (492)
++..+|.++.++. ...|.|.
T Consensus 339 ~~~~~~~~~a~~~~~~~~s~~ 359 (372)
T cd03792 339 ELRRKMGANAREHVRENFLIT 359 (372)
T ss_pred HHHHHHHHHHHHHHHHHcCHH
Confidence 7788998888874 4566664
No 30
>TIGR02149 glgA_Coryne glycogen synthase, Corynebacterium family. This model describes Corynebacterium glutamicum GlgA and closely related proteins in several other species. This enzyme is required for glycogen biosynthesis and appears to replace the distantly related TIGR02095 family of ADP-glucose type glycogen synthase in Corynebacterium glutamicum, Mycobacterium tuberculosis, Bifidobacterium longum, and Streptomyces coelicolor.
Probab=90.63 E-value=0.8 Score=47.10 Aligned_cols=94 Identities=17% Similarity=0.142 Sum_probs=60.3
Q ss_pred chhhhcccCCcEEEeeCCCCCCCchHHHHHhcCceeEEeeCCcccCccCCCCCCcEEEEEecccc------chhh-hHHH
Q 011152 350 KNAGQGMASSKFCLNIAGDTPSSNRLFDAIASHCVPVIISDEIELPFEDVLDYSEFCITVHSTDA------IKKG-FLLN 422 (492)
Q Consensus 350 ~~y~~~m~~S~FCL~P~Gd~~~s~RlfDAi~aGCIPViisd~~~LPF~dvlDw~~fSV~I~e~dv------~~~~-~l~~ 422 (492)
.+..+.|..|..++.|.-.......++|||.+|| |||.++.-..+ +++.-....+.++..|. .... .|.+
T Consensus 272 ~~~~~~~~~aDv~v~ps~~e~~g~~~lEA~a~G~-PvI~s~~~~~~--e~i~~~~~G~~~~~~~~~~~~~~~~l~~~i~~ 348 (388)
T TIGR02149 272 EELVELLSNAEVFVCPSIYEPLGIVNLEAMACGT-PVVASATGGIP--EVVVDGETGFLVPPDNSDADGFQAELAKAINI 348 (388)
T ss_pred HHHHHHHHhCCEEEeCCccCCCChHHHHHHHcCC-CEEEeCCCCHH--HHhhCCCceEEcCCCCCcccchHHHHHHHHHH
Confidence 4567789999999998765555778899999998 88888753222 33433344555665553 2211 1333
Q ss_pred HHhCCCHHHHHHHHHHHHH-HhhceEe
Q 011152 423 LLRGIKQEQWTKMWERLKE-VVQHFEY 448 (492)
Q Consensus 423 iL~~I~~~~i~~Mr~~l~~-v~~~f~y 448 (492)
++. ++++..+|.++.++ +.+.|.|
T Consensus 349 l~~--~~~~~~~~~~~a~~~~~~~~s~ 373 (388)
T TIGR02149 349 LLA--DPELAKKMGIAGRKRAEEEFSW 373 (388)
T ss_pred HHh--CHHHHHHHHHHHHHHHHHhCCH
Confidence 333 57778888888776 4455655
No 31
>PF13524 Glyco_trans_1_2: Glycosyl transferases group 1
Probab=89.65 E-value=1.2 Score=36.59 Aligned_cols=80 Identities=19% Similarity=0.290 Sum_probs=45.8
Q ss_pred EEeeCCCCCCCchHHHHHhcCceeEEeeCCcccCccCCCCCCcEEEEEe-ccccchhhhHHHHHhCCCHHHHHHHHHHHH
Q 011152 362 CLNIAGDTPSSNRLFDAIASHCVPVIISDEIELPFEDVLDYSEFCITVH-STDAIKKGFLLNLLRGIKQEQWTKMWERLK 440 (492)
Q Consensus 362 CL~P~Gd~~~s~RlfDAi~aGCIPViisd~~~LPF~dvlDw~~fSV~I~-e~dv~~~~~l~~iL~~I~~~~i~~Mr~~l~ 440 (492)
||.|.-.+..+.|+||+|++|+.. |..+.-.+ .+.++..+-.+.++ .+++.. ....|.+ .+++.++|.++..
T Consensus 2 ~Ln~~~~~~~~~r~~E~~a~G~~v-i~~~~~~~--~~~~~~~~~~~~~~~~~el~~---~i~~ll~-~~~~~~~ia~~a~ 74 (92)
T PF13524_consen 2 NLNPSRSDGPNMRIFEAMACGTPV-ISDDSPGL--REIFEDGEHIITYNDPEELAE---KIEYLLE-NPEERRRIAKNAR 74 (92)
T ss_pred EeeCCCCCCCchHHHHHHHCCCeE-EECChHHH--HHHcCCCCeEEEECCHHHHHH---HHHHHHC-CHHHHHHHHHHHH
Confidence 444433333578999999999864 44433222 22345554555554 333332 3333333 7889999998887
Q ss_pred HH-hhceEe
Q 011152 441 EV-VQHFEY 448 (492)
Q Consensus 441 ~v-~~~f~y 448 (492)
+. ..++.|
T Consensus 75 ~~v~~~~t~ 83 (92)
T PF13524_consen 75 ERVLKRHTW 83 (92)
T ss_pred HHHHHhCCH
Confidence 64 435555
No 32
>cd03807 GT1_WbnK_like This family is most closely related to the GT1 family of glycosyltransferases. WbnK in Shigella dysenteriae has been shown to be involved in the type 7 O-antigen biosynthesis.
Probab=89.52 E-value=0.74 Score=45.41 Aligned_cols=92 Identities=15% Similarity=0.130 Sum_probs=57.3
Q ss_pred chhhhcccCCcEEEeeCCCCCCCchHHHHHhcCceeEEeeCCcccCccCCCCCCcEEEEEeccccchhh-hHHHHHhCCC
Q 011152 350 KNAGQGMASSKFCLNIAGDTPSSNRLFDAIASHCVPVIISDEIELPFEDVLDYSEFCITVHSTDAIKKG-FLLNLLRGIK 428 (492)
Q Consensus 350 ~~y~~~m~~S~FCL~P~Gd~~~s~RlfDAi~aGCIPViisd~~~LPF~dvlDw~~fSV~I~e~dv~~~~-~l~~iL~~I~ 428 (492)
.+..+.|..+..+++|......+..++|||++|| |||.++.-.. .+.++- ..+.++..+..+.. .+.+++. .
T Consensus 260 ~~~~~~~~~adi~v~ps~~e~~~~~~~Ea~a~g~-PvI~~~~~~~--~e~~~~--~g~~~~~~~~~~l~~~i~~l~~--~ 332 (365)
T cd03807 260 SDVPALLNALDVFVLSSLSEGFPNVLLEAMACGL-PVVATDVGDN--AELVGD--TGFLVPPGDPEALAEAIEALLA--D 332 (365)
T ss_pred ccHHHHHHhCCEEEeCCccccCCcHHHHHHhcCC-CEEEcCCCCh--HHHhhc--CCEEeCCCCHHHHHHHHHHHHh--C
Confidence 3466788999999999877666888999999996 7888764221 122221 44555555543311 1333333 3
Q ss_pred HHHHHHHHHHHHH-HhhceEe
Q 011152 429 QEQWTKMWERLKE-VVQHFEY 448 (492)
Q Consensus 429 ~~~i~~Mr~~l~~-v~~~f~y 448 (492)
+++..+|.++.++ +.+.|.|
T Consensus 333 ~~~~~~~~~~~~~~~~~~~s~ 353 (365)
T cd03807 333 PALRQALGEAARERIEENFSI 353 (365)
T ss_pred hHHHHHHHHHHHHHHHHhCCH
Confidence 4677777777665 4455555
No 33
>PRK10307 putative glycosyl transferase; Provisional
Probab=89.50 E-value=1.3 Score=46.52 Aligned_cols=94 Identities=11% Similarity=0.102 Sum_probs=60.5
Q ss_pred chhhhcccCCcEEEeeCCCCC----CCchHHHHHhcCceeEEeeCCcccCccCCCCCCcEEEEEeccccchhhhHHHHHh
Q 011152 350 KNAGQGMASSKFCLNIAGDTP----SSNRLFDAIASHCVPVIISDEIELPFEDVLDYSEFCITVHSTDAIKKGFLLNLLR 425 (492)
Q Consensus 350 ~~y~~~m~~S~FCL~P~Gd~~----~s~RlfDAi~aGCIPViisd~~~LPF~dvlDw~~fSV~I~e~dv~~~~~l~~iL~ 425 (492)
++..+.|+.+..++.|.=.+. ....++|||++| +|||.++.--....+++. .-.+.++..|+.+ +.+.|.
T Consensus 295 ~~~~~~~~~aDi~v~ps~~e~~~~~~p~kl~eama~G-~PVi~s~~~g~~~~~~i~--~~G~~~~~~d~~~---la~~i~ 368 (412)
T PRK10307 295 DRLPALLKMADCHLLPQKAGAADLVLPSKLTNMLASG-RNVVATAEPGTELGQLVE--GIGVCVEPESVEA---LVAAIA 368 (412)
T ss_pred HHHHHHHHhcCEeEEeeccCcccccCcHHHHHHHHcC-CCEEEEeCCCchHHHHHh--CCcEEeCCCCHHH---HHHHHH
Confidence 456778889999888753322 234589999999 688888642222334555 3466677666554 444443
Q ss_pred CC--CHHHHHHHHHHHHH-HhhceEec
Q 011152 426 GI--KQEQWTKMWERLKE-VVQHFEYQ 449 (492)
Q Consensus 426 ~I--~~~~i~~Mr~~l~~-v~~~f~y~ 449 (492)
.+ +++...+|+++.++ +.++|.|.
T Consensus 369 ~l~~~~~~~~~~~~~a~~~~~~~fs~~ 395 (412)
T PRK10307 369 ALARQALLRPKLGTVAREYAERTLDKE 395 (412)
T ss_pred HHHhCHHHHHHHHHHHHHHHHHHcCHH
Confidence 33 56778889988887 44567664
No 34
>PLN02949 transferase, transferring glycosyl groups
Probab=89.33 E-value=4.6 Score=44.02 Aligned_cols=95 Identities=13% Similarity=0.121 Sum_probs=56.3
Q ss_pred chhhhcccCCcEEEeeCCCCCCCchHHHHHhcCceeEEeeCCcccCccCCCC-CC-cEEEEEeccccchhh-hHHHHHhC
Q 011152 350 KNAGQGMASSKFCLNIAGDTPSSNRLFDAIASHCVPVIISDEIELPFEDVLD-YS-EFCITVHSTDAIKKG-FLLNLLRG 426 (492)
Q Consensus 350 ~~y~~~m~~S~FCL~P~Gd~~~s~RlfDAi~aGCIPViisd~~~LPF~dvlD-w~-~fSV~I~e~dv~~~~-~l~~iL~~ 426 (492)
++..+.++++.+++.|.-+.....-+.|||++||+||.-..+- |-++++. +. .-.-++. .++.... .|.+++.
T Consensus 346 ~el~~ll~~a~~~v~~s~~E~FGivvlEAMA~G~PVIa~~~gG--p~~eIV~~~~~g~tG~l~-~~~~~la~ai~~ll~- 421 (463)
T PLN02949 346 RDLVRLLGGAVAGLHSMIDEHFGISVVEYMAAGAVPIAHNSAG--PKMDIVLDEDGQQTGFLA-TTVEEYADAILEVLR- 421 (463)
T ss_pred HHHHHHHHhCcEEEeCCccCCCChHHHHHHHcCCcEEEeCCCC--CcceeeecCCCCcccccC-CCHHHHHHHHHHHHh-
Confidence 4566778899988888766666788999999998776654321 3333321 11 1111121 1332211 1334333
Q ss_pred CCHHHHHHHHHHHHHHhhceEe
Q 011152 427 IKQEQWTKMWERLKEVVQHFEY 448 (492)
Q Consensus 427 I~~~~i~~Mr~~l~~v~~~f~y 448 (492)
.++++..+|+++.++....|.+
T Consensus 422 ~~~~~r~~m~~~ar~~~~~FS~ 443 (463)
T PLN02949 422 MRETERLEIAAAARKRANRFSE 443 (463)
T ss_pred CCHHHHHHHHHHHHHHHHHcCH
Confidence 2677788899988876666654
No 35
>cd03816 GT1_ALG1_like This family is most closely related to the GT1 family of glycosyltransferases. The yeast gene ALG1 has been shown to function as a mannosyltransferase that catalyzes the formation of dolichol pyrophosphate (Dol-PP)-GlcNAc2Man from GDP-Man and Dol-PP-Glc-NAc2, and participates in the formation of the lipid-linked precursor oligosaccharide for N-glycosylation. In humans ALG1 has been associated with the congenital disorders of glycosylation (CDG) designated as subtype CDG-Ik.
Probab=89.11 E-value=2.4 Score=45.08 Aligned_cols=122 Identities=16% Similarity=0.199 Sum_probs=68.5
Q ss_pred eEEEEeeccccCCCchhhHHHHHHhhcCC--CeEEEeCcccCCCcchhhhcccCCcEEEeeC----CCCCCCchHHHHHh
Q 011152 307 TLAYFQGAIYRKDGGVIRQELYYLLKDEK--DVHFTFGSIQGDGVKNAGQGMASSKFCLNIA----GDTPSSNRLFDAIA 380 (492)
Q Consensus 307 ~L~~FaG~~~~~~~~~iR~~L~~~~~~~~--~~~~~~g~~~~~~~~~y~~~m~~S~FCL~P~----Gd~~~s~RlfDAi~ 380 (492)
+.+.+.|. |..++.|.++.+... ++.+..|.. ..+++.+.|..+..++.|. |.+ ....++|||+
T Consensus 270 i~l~ivG~------G~~~~~l~~~~~~~~l~~~~~~~g~~---~~~~~~~~l~~aDv~v~~~~~~~~~~-~p~~~~Eama 339 (415)
T cd03816 270 LLCIITGK------GPLKEKYLERIKELKLKKVTIRTPWL---SAEDYPKLLASADLGVSLHTSSSGLD-LPMKVVDMFG 339 (415)
T ss_pred EEEEEEec------CccHHHHHHHHHHcCCCcEEEEcCcC---CHHHHHHHHHhCCEEEEccccccccC-CcHHHHHHHH
Confidence 55666663 234555555544322 222221222 2356778888998887642 333 3567999999
Q ss_pred cCceeEEeeCCcccCccCCCCCCcEEEEEeccccchhh-hHHHHHhC-CCHHHHHHHHHHHHHHh
Q 011152 381 SHCVPVIISDEIELPFEDVLDYSEFCITVHSTDAIKKG-FLLNLLRG-IKQEQWTKMWERLKEVV 443 (492)
Q Consensus 381 aGCIPViisd~~~LPF~dvlDw~~fSV~I~e~dv~~~~-~l~~iL~~-I~~~~i~~Mr~~l~~v~ 443 (492)
+|+ |||.++.-..+ +++.-..-.+.++ |..... .|..+|.. .++++..+|.++.++..
T Consensus 340 ~G~-PVI~s~~~~~~--eiv~~~~~G~lv~--d~~~la~~i~~ll~~~~~~~~~~~m~~~~~~~~ 399 (415)
T cd03816 340 CGL-PVCALDFKCID--ELVKHGENGLVFG--DSEELAEQLIDLLSNFPNRGKLNSLKKGAQEES 399 (415)
T ss_pred cCC-CEEEeCCCCHH--HHhcCCCCEEEEC--CHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHhh
Confidence 998 99998753222 3443333333443 433311 14444443 12788899988887755
No 36
>PRK09922 UDP-D-galactose:(glucosyl)lipopolysaccharide-1,6-D-galactosyltransferase; Provisional
Probab=88.99 E-value=3.2 Score=42.79 Aligned_cols=92 Identities=14% Similarity=0.060 Sum_probs=52.5
Q ss_pred hhhhcccCCcEEEeeCCCCCCCchHHHHHhcCceeEEeeCCcccCccCCCCCCcEEEEEeccccchhh-hHHHHHhCCCH
Q 011152 351 NAGQGMASSKFCLNIAGDTPSSNRLFDAIASHCVPVIISDEIELPFEDVLDYSEFCITVHSTDAIKKG-FLLNLLRGIKQ 429 (492)
Q Consensus 351 ~y~~~m~~S~FCL~P~Gd~~~s~RlfDAi~aGCIPViisd~~~LPF~dvlDw~~fSV~I~e~dv~~~~-~l~~iL~~I~~ 429 (492)
.+.+.++.+..++.|.........++|||++| +|||.++...-+ .+++.-..-.+.++..|+.... .|..+|..-..
T Consensus 250 ~~~~~~~~~d~~v~~s~~Egf~~~~lEAma~G-~Pvv~s~~~~g~-~eiv~~~~~G~lv~~~d~~~la~~i~~l~~~~~~ 327 (359)
T PRK09922 250 VVQQKIKNVSALLLTSKFEGFPMTLLEAMSYG-IPCISSDCMSGP-RDIIKPGLNGELYTPGNIDEFVGKLNKVISGEVK 327 (359)
T ss_pred HHHHHHhcCcEEEECCcccCcChHHHHHHHcC-CCEEEeCCCCCh-HHHccCCCceEEECCCCHHHHHHHHHHHHhCccc
Confidence 34556778888888876655688999999999 688888722222 2334333344555666655421 13344443321
Q ss_pred HHHHHHHHHHHHHhh
Q 011152 430 EQWTKMWERLKEVVQ 444 (492)
Q Consensus 430 ~~i~~Mr~~l~~v~~ 444 (492)
....++++++++...
T Consensus 328 ~~~~~~~~~~~~~~~ 342 (359)
T PRK09922 328 YQHDAIPNSIERFYE 342 (359)
T ss_pred CCHHHHHHHHHHhhH
Confidence 123455555554333
No 37
>PRK15484 lipopolysaccharide 1,2-N-acetylglucosaminetransferase; Provisional
Probab=88.80 E-value=3.1 Score=43.60 Aligned_cols=94 Identities=11% Similarity=0.054 Sum_probs=56.1
Q ss_pred chhhhcccCCcEEEeeCCC-CCCCchHHHHHhcCceeEEeeCCcccCccCCCCCCcEEE-EEeccccchhh-hHHHHHhC
Q 011152 350 KNAGQGMASSKFCLNIAGD-TPSSNRLFDAIASHCVPVIISDEIELPFEDVLDYSEFCI-TVHSTDAIKKG-FLLNLLRG 426 (492)
Q Consensus 350 ~~y~~~m~~S~FCL~P~Gd-~~~s~RlfDAi~aGCIPViisd~~~LPF~dvlDw~~fSV-~I~e~dv~~~~-~l~~iL~~ 426 (492)
++..+.|+.|..+++|..+ .....-++|||++| +|||.++.--.| +++.-..-.. .++..|..... .|..+|
T Consensus 268 ~~l~~~~~~aDv~v~pS~~~E~f~~~~lEAma~G-~PVI~s~~gg~~--Eiv~~~~~G~~l~~~~d~~~la~~I~~ll-- 342 (380)
T PRK15484 268 EKMHNYYPLADLVVVPSQVEEAFCMVAVEAMAAG-KPVLASTKGGIT--EFVLEGITGYHLAEPMTSDSIISDINRTL-- 342 (380)
T ss_pred HHHHHHHHhCCEEEeCCCCccccccHHHHHHHcC-CCEEEeCCCCcH--hhcccCCceEEEeCCCCHHHHHHHHHHHH--
Confidence 3566778999999999764 44467899999999 789998753322 3332222222 34444443311 133333
Q ss_pred CCHHHHHHHHHHHHH-HhhceEec
Q 011152 427 IKQEQWTKMWERLKE-VVQHFEYQ 449 (492)
Q Consensus 427 I~~~~i~~Mr~~l~~-v~~~f~y~ 449 (492)
.+.+..+|.++.++ +..+|.|.
T Consensus 343 -~d~~~~~~~~~ar~~~~~~fsw~ 365 (380)
T PRK15484 343 -ADPELTQIAEQAKDFVFSKYSWE 365 (380)
T ss_pred -cCHHHHHHHHHHHHHHHHhCCHH
Confidence 33345677777764 55666664
No 38
>cd04949 GT1_gtfA_like This family is most closely related to the GT1 family of glycosyltransferases and is named after gtfA in Streptococcus gordonii, where it plays a role in the O-linked glycosylation of GspB, a cell surface glycoprotein involved in platelet binding. In general glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltra
Probab=88.77 E-value=0.74 Score=47.20 Aligned_cols=95 Identities=17% Similarity=0.174 Sum_probs=61.4
Q ss_pred chhhhcccCCcEEEeeCCCCCCCchHHHHHhcCceeEEeeCCcccCccCCCCCCcEEEEEeccccchhh-hHHHHHhCCC
Q 011152 350 KNAGQGMASSKFCLNIAGDTPSSNRLFDAIASHCVPVIISDEIELPFEDVLDYSEFCITVHSTDAIKKG-FLLNLLRGIK 428 (492)
Q Consensus 350 ~~y~~~m~~S~FCL~P~Gd~~~s~RlfDAi~aGCIPViisd~~~LPF~dvlDw~~fSV~I~e~dv~~~~-~l~~iL~~I~ 428 (492)
.+..+.++.+..++.|.-.......+.|||.+|| |||..+--.-| .+++.-.+-.+.++..|..+.. .|..+|. .
T Consensus 270 ~~~~~~~~~ad~~v~~S~~Eg~~~~~lEAma~G~-PvI~~~~~~g~-~~~v~~~~~G~lv~~~d~~~la~~i~~ll~--~ 345 (372)
T cd04949 270 RDLDEVYQKAQLSLLTSQSEGFGLSLMEALSHGL-PVISYDVNYGP-SEIIEDGENGYLVPKGDIEALAEAIIELLN--D 345 (372)
T ss_pred CCHHHHHhhhhEEEecccccccChHHHHHHhCCC-CEEEecCCCCc-HHHcccCCCceEeCCCcHHHHHHHHHHHHc--C
Confidence 3466778899999998755455778999999998 77776521112 2233333455566655654411 1444444 5
Q ss_pred HHHHHHHHHHHHHHhhceEe
Q 011152 429 QEQWTKMWERLKEVVQHFEY 448 (492)
Q Consensus 429 ~~~i~~Mr~~l~~v~~~f~y 448 (492)
++.+.+|+++.++....|.+
T Consensus 346 ~~~~~~~~~~a~~~~~~~s~ 365 (372)
T cd04949 346 PKLLQKFSEAAYENAERYSE 365 (372)
T ss_pred HHHHHHHHHHHHHHHHHhhH
Confidence 67899999998887766654
No 39
>cd03804 GT1_wbaZ_like This family is most closely related to the GT1 family of glycosyltransferases. wbaZ in Salmonella enterica has been shown to possess the mannosyl transferase activity. The members of this family are found in certain bacteria and Archaea.
Probab=87.91 E-value=1.2 Score=45.21 Aligned_cols=63 Identities=16% Similarity=-0.013 Sum_probs=42.5
Q ss_pred chhhhcccCCcEEEeeCCCCCCCchHHHHHhcCceeEEeeCCcccCccCCCCCCcEEEEEeccccch
Q 011152 350 KNAGQGMASSKFCLNIAGDTPSSNRLFDAIASHCVPVIISDEIELPFEDVLDYSEFCITVHSTDAIK 416 (492)
Q Consensus 350 ~~y~~~m~~S~FCL~P~Gd~~~s~RlfDAi~aGCIPViisd~~~LPF~dvlDw~~fSV~I~e~dv~~ 416 (492)
++..+.++.+..++.|.- ......++|||++|| |||..+.--.+ +++.=.+..+.++..+...
T Consensus 253 ~~~~~~~~~ad~~v~ps~-e~~g~~~~Eama~G~-Pvi~~~~~~~~--e~i~~~~~G~~~~~~~~~~ 315 (351)
T cd03804 253 EELRDLYARARAFLFPAE-EDFGIVPVEAMASGT-PVIAYGKGGAL--ETVIDGVTGILFEEQTVES 315 (351)
T ss_pred HHHHHHHHhCCEEEECCc-CCCCchHHHHHHcCC-CEEEeCCCCCc--ceeeCCCCEEEeCCCCHHH
Confidence 457788999999999865 334567899999998 99988753322 3333234566676555443
No 40
>cd03817 GT1_UGDG_like This family is most closely related to the GT1 family of glycosyltransferases. UDP-glucose-diacylglycerol glucosyltransferase (UGDG; also known as 1,2-diacylglycerol 3-glucosyltransferase) catalyzes the transfer of glucose from UDP-glucose to 1,2-diacylglycerol forming 3-D-glucosyl-1,2-diacylglycerol.
Probab=87.67 E-value=2.3 Score=42.12 Aligned_cols=92 Identities=17% Similarity=0.216 Sum_probs=58.5
Q ss_pred chhhhcccCCcEEEeeCCCCCCCchHHHHHhcCceeEEeeCCcccCccCCCCCCcEEEEEeccccchhh-hHHHHHhCCC
Q 011152 350 KNAGQGMASSKFCLNIAGDTPSSNRLFDAIASHCVPVIISDEIELPFEDVLDYSEFCITVHSTDAIKKG-FLLNLLRGIK 428 (492)
Q Consensus 350 ~~y~~~m~~S~FCL~P~Gd~~~s~RlfDAi~aGCIPViisd~~~LPF~dvlDw~~fSV~I~e~dv~~~~-~l~~iL~~I~ 428 (492)
+++.+.|..|.+.++|......+..++|||.+|+ |||..+.-. +.+.+.-....+.++..+. +.. .+.+++. .
T Consensus 270 ~~~~~~~~~ad~~l~~s~~e~~~~~~~Ea~~~g~-PvI~~~~~~--~~~~i~~~~~g~~~~~~~~-~~~~~i~~l~~--~ 343 (374)
T cd03817 270 EELPDYYKAADLFVFASTTETQGLVLLEAMAAGL-PVVAVDAPG--LPDLVADGENGFLFPPGDE-ALAEALLRLLQ--D 343 (374)
T ss_pred HHHHHHHHHcCEEEecccccCcChHHHHHHHcCC-cEEEeCCCC--hhhheecCceeEEeCCCCH-HHHHHHHHHHh--C
Confidence 4567789999999999876666788999999986 556665432 2333433344555655542 211 1334443 4
Q ss_pred HHHHHHHHHHHHHHhhceE
Q 011152 429 QEQWTKMWERLKEVVQHFE 447 (492)
Q Consensus 429 ~~~i~~Mr~~l~~v~~~f~ 447 (492)
++..++|+++.++....+.
T Consensus 344 ~~~~~~~~~~~~~~~~~~~ 362 (374)
T cd03817 344 PELRRRLSKNAEESAEKFS 362 (374)
T ss_pred hHHHHHHHHHHHHHHHHHH
Confidence 5556788888887766543
No 41
>cd04955 GT1_like_6 This family is most closely related to the GT1 family of glycosyltransferases. Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homolog
Probab=87.65 E-value=3.4 Score=41.51 Aligned_cols=90 Identities=19% Similarity=0.240 Sum_probs=53.6
Q ss_pred chhhhcccCCcEEEeeCCC-CCCCchHHHHHhcCceeEEeeCCcccCccCCCCCCcEEEEEeccc-cchhhhHHHHHhCC
Q 011152 350 KNAGQGMASSKFCLNIAGD-TPSSNRLFDAIASHCVPVIISDEIELPFEDVLDYSEFCITVHSTD-AIKKGFLLNLLRGI 427 (492)
Q Consensus 350 ~~y~~~m~~S~FCL~P~Gd-~~~s~RlfDAi~aGCIPViisd~~~LPF~dvlDw~~fSV~I~e~d-v~~~~~l~~iL~~I 427 (492)
++..+.+..+..++.|.-. ......++|||.+|| |||.++.- +..+++.-. ...++..+ +.+ .+..+++
T Consensus 259 ~~~~~~~~~ad~~v~ps~~~e~~~~~~~EAma~G~-PvI~s~~~--~~~e~~~~~--g~~~~~~~~l~~--~i~~l~~-- 329 (363)
T cd04955 259 QELLELLRYAALFYLHGHSVGGTNPSLLEAMAYGC-PVLASDNP--FNREVLGDK--AIYFKVGDDLAS--LLEELEA-- 329 (363)
T ss_pred HHHHHHHHhCCEEEeCCccCCCCChHHHHHHHcCC-CEEEecCC--ccceeecCC--eeEecCchHHHH--HHHHHHh--
Confidence 3456778888888887654 445678999999999 77777643 223444332 23334444 222 1333333
Q ss_pred CHHHHHHHHHHHHHHh-hceEe
Q 011152 428 KQEQWTKMWERLKEVV-QHFEY 448 (492)
Q Consensus 428 ~~~~i~~Mr~~l~~v~-~~f~y 448 (492)
.++.+.+|.++.++.. ..|.|
T Consensus 330 ~~~~~~~~~~~~~~~~~~~fs~ 351 (363)
T cd04955 330 DPEEVSAMAKAARERIREKYTW 351 (363)
T ss_pred CHHHHHHHHHHHHHHHHHhCCH
Confidence 3466778888777643 34554
No 42
>cd03805 GT1_ALG2_like This family is most closely related to the GT1 family of glycosyltransferases. ALG2, a 1,3-mannosyltransferase, in yeast catalyzes the mannosylation of Man(2)GlcNAc(2)-dolichol diphosphate and Man(1)GlcNAc(2)-dolichol diphosphate to form Man(3)GlcNAc(2)-dolichol diphosphate. A deficiency of this enzyme causes an abnormal accumulation of Man1GlcNAc2-PP-dolichol and Man2GlcNAc2-PP-dolichol, which is associated with a type of congenital disorders of glycosylation (CDG), designated CDG-Ii, in humans.
Probab=87.55 E-value=1.1 Score=46.00 Aligned_cols=92 Identities=16% Similarity=0.146 Sum_probs=56.7
Q ss_pred hhhhcccCCcEEEeeCCCCCCCchHHHHHhcCceeEEeeCCcccCccCCCCCCcEEEEEeccccchhh-hHHHHHhCCCH
Q 011152 351 NAGQGMASSKFCLNIAGDTPSSNRLFDAIASHCVPVIISDEIELPFEDVLDYSEFCITVHSTDAIKKG-FLLNLLRGIKQ 429 (492)
Q Consensus 351 ~y~~~m~~S~FCL~P~Gd~~~s~RlfDAi~aGCIPViisd~~~LPF~dvlDw~~fSV~I~e~dv~~~~-~l~~iL~~I~~ 429 (492)
+..+.++.+.+++.|.........++|||++| +|||.++.-- +-+-+.+.. -.+.++. |..... .|..++. .+
T Consensus 292 ~~~~~l~~ad~~l~~s~~E~~g~~~lEAma~G-~PvI~s~~~~-~~e~i~~~~-~g~~~~~-~~~~~a~~i~~l~~--~~ 365 (392)
T cd03805 292 QKELLLSSARALLYTPSNEHFGIVPLEAMYAG-KPVIACNSGG-PLETVVDGE-TGFLCEP-TPEEFAEAMLKLAN--DP 365 (392)
T ss_pred HHHHHHhhCeEEEECCCcCCCCchHHHHHHcC-CCEEEECCCC-cHHHhccCC-ceEEeCC-CHHHHHHHHHHHHh--Ch
Confidence 34677899999999877665677899999999 5777776422 222234433 3444553 433311 1334333 45
Q ss_pred HHHHHHHHHHHH-HhhceEe
Q 011152 430 EQWTKMWERLKE-VVQHFEY 448 (492)
Q Consensus 430 ~~i~~Mr~~l~~-v~~~f~y 448 (492)
+...+|+++.++ +...|.|
T Consensus 366 ~~~~~~~~~a~~~~~~~~s~ 385 (392)
T cd03805 366 DLADRMGAAGRKRVKEKFST 385 (392)
T ss_pred HHHHHHHHHHHHHHHHhcCH
Confidence 678888888776 4455655
No 43
>cd03811 GT1_WabH_like This family is most closely related to the GT1 family of glycosyltransferases. WabH in Klebsiella pneumoniae has been shown to transfer a GlcNAc residue from UDP-GlcNAc onto the acceptor GalUA residue in the cellular outer core.
Probab=86.30 E-value=2.3 Score=41.48 Aligned_cols=92 Identities=16% Similarity=0.086 Sum_probs=54.6
Q ss_pred hhhhcccCCcEEEeeCCCCCCCchHHHHHhcCceeEEeeCCcccCccCCCCCCcEEEEEeccccchhhhHHH-HHhCC-C
Q 011152 351 NAGQGMASSKFCLNIAGDTPSSNRLFDAIASHCVPVIISDEIELPFEDVLDYSEFCITVHSTDAIKKGFLLN-LLRGI-K 428 (492)
Q Consensus 351 ~y~~~m~~S~FCL~P~Gd~~~s~RlfDAi~aGCIPViisd~~~LPF~dvlDw~~fSV~I~e~dv~~~~~l~~-iL~~I-~ 428 (492)
+..+.+..+.++++|.-.......++|||.+||. ||.++.- ...+++.=....+.++..+......+.+ ++... .
T Consensus 256 ~~~~~~~~~d~~i~ps~~e~~~~~~~Ea~~~G~P-vI~~~~~--~~~e~i~~~~~g~~~~~~~~~~~~~~~~~i~~~~~~ 332 (353)
T cd03811 256 NPYPYLKAADLFVLSSRYEGFPNVLLEAMALGTP-VVATDCP--GPREILEDGENGLLVPVGDEAALAAAALALLDLLLD 332 (353)
T ss_pred CHHHHHHhCCEEEeCcccCCCCcHHHHHHHhCCC-EEEcCCC--ChHHHhcCCCceEEECCCCHHHHHHHHHHHHhccCC
Confidence 4567889999999997655567789999999975 5555543 2234444445566677666543111122 22222 3
Q ss_pred HHHHHHHHH-HHHHHhhc
Q 011152 429 QEQWTKMWE-RLKEVVQH 445 (492)
Q Consensus 429 ~~~i~~Mr~-~l~~v~~~ 445 (492)
++...+|.+ +...+.++
T Consensus 333 ~~~~~~~~~~~~~~~~~~ 350 (353)
T cd03811 333 PELRERLAAAARERVARE 350 (353)
T ss_pred hHHHHHHHHHHHHHHHHH
Confidence 555666766 44444443
No 44
>cd03802 GT1_AviGT4_like This family is most closely related to the GT1 family of glycosyltransferases. aviGT4 in Streptomyces viridochromogenes has been shown to be involved in biosynthesis of oligosaccharide antibiotic avilamycin A. Inactivation of aviGT4 resulted in a mutant that accumulated a novel avilamycin derivative lacking the terminal eurekanate residue.
Probab=85.75 E-value=1.6 Score=43.44 Aligned_cols=42 Identities=17% Similarity=0.078 Sum_probs=33.1
Q ss_pred hhhhcccCCcEEEeeCCC-CCCCchHHHHHhcCceeEEeeCCcc
Q 011152 351 NAGQGMASSKFCLNIAGD-TPSSNRLFDAIASHCVPVIISDEIE 393 (492)
Q Consensus 351 ~y~~~m~~S~FCL~P~Gd-~~~s~RlfDAi~aGCIPViisd~~~ 393 (492)
+..+.|+.+.+++.|.-. ......++|||++|+ |||.+|.--
T Consensus 236 ~~~~~~~~~d~~v~ps~~~E~~~~~~lEAma~G~-PvI~~~~~~ 278 (335)
T cd03802 236 EKAELLGNARALLFPILWEEPFGLVMIEAMACGT-PVIAFRRGA 278 (335)
T ss_pred HHHHHHHhCcEEEeCCcccCCcchHHHHHHhcCC-CEEEeCCCC
Confidence 456778999999999642 334678999999997 999988643
No 45
>TIGR02095 glgA glycogen/starch synthases, ADP-glucose type. This family consists of glycogen (or starch) synthases that use ADP-glucose (EC 2.4.1.21), rather than UDP-glucose (EC 2.4.1.11) as in animals, as the glucose donor. This enzyme is found in bacteria and plants. Whether the name given is glycogen synthase or starch synthase depends on context, and therefore on substrate.
Probab=85.62 E-value=3.9 Score=44.10 Aligned_cols=94 Identities=19% Similarity=0.140 Sum_probs=56.3
Q ss_pred hhhhcccCCcEEEeeCCCCCCCchHHHHHhcCceeEEeeCCcccCccCCCCCC-----cEEEEEeccccchhh-hHHHHH
Q 011152 351 NAGQGMASSKFCLNIAGDTPSSNRLFDAIASHCVPVIISDEIELPFEDVLDYS-----EFCITVHSTDAIKKG-FLLNLL 424 (492)
Q Consensus 351 ~y~~~m~~S~FCL~P~Gd~~~s~RlfDAi~aGCIPViisd~~~LPF~dvlDw~-----~fSV~I~e~dv~~~~-~l~~iL 424 (492)
...+.++.+.+++.|.-..+......|||.+||.||. ++.--++ +-+.|.+ ...+.++..|..... .|..+|
T Consensus 358 ~~~~~~~~aDv~l~pS~~E~~gl~~lEAma~G~pvI~-s~~gg~~-e~v~~~~~~~~~~~G~l~~~~d~~~la~~i~~~l 435 (473)
T TIGR02095 358 LAHLIYAGADFILMPSRFEPCGLTQLYAMRYGTVPIV-RRTGGLA-DTVVDGDPEAESGTGFLFEEYDPGALLAALSRAL 435 (473)
T ss_pred HHHHHHHhCCEEEeCCCcCCcHHHHHHHHHCCCCeEE-ccCCCcc-ceEecCCCCCCCCceEEeCCCCHHHHHHHHHHHH
Confidence 3456789999999998877778889999999996654 5432222 1122321 445666666654311 133333
Q ss_pred hCC--CHHHHHHHHHHHHHHhhceEe
Q 011152 425 RGI--KQEQWTKMWERLKEVVQHFEY 448 (492)
Q Consensus 425 ~~I--~~~~i~~Mr~~l~~v~~~f~y 448 (492)
... .++.+.+|.++.. .+.|.|
T Consensus 436 ~~~~~~~~~~~~~~~~~~--~~~fsw 459 (473)
T TIGR02095 436 RLYRQDPSLWEALQKNAM--SQDFSW 459 (473)
T ss_pred HHHhcCHHHHHHHHHHHh--ccCCCc
Confidence 321 4566777776653 244544
No 46
>KOG2619 consensus Fucosyltransferase [Carbohydrate transport and metabolism; Amino acid transport and metabolism]
Probab=85.24 E-value=5.8 Score=42.06 Aligned_cols=148 Identities=16% Similarity=0.215 Sum_probs=85.8
Q ss_pred cCCCceeeccccccccC--CCCC-C--CCCCCCCCeEEEEeeccccCCCchhhHHHHHHhhcCCCeEEEeCccc-----C
Q 011152 277 ANVEKDIIAPYMHLVRT--IPGG-E--SPPFDQRPTLAYFQGAIYRKDGGVIRQELYYLLKDEKDVHFTFGSIQ-----G 346 (492)
Q Consensus 277 ~~~~kDVviP~~~~~~~--~p~~-~--~~~~~~R~~L~~FaG~~~~~~~~~iR~~L~~~~~~~~~~~~~~g~~~-----~ 346 (492)
++-+-|+..||-..... ++.- + ..-..+++..+.++-... ...-|.++++.+...-.+. ..|.+. +
T Consensus 163 yr~dSd~~~pygy~~~~~~~~~~~p~~~~~~~k~~~~aw~vSnc~---~~~~R~~~~~~L~k~l~iD-~YG~c~~~~~~~ 238 (372)
T KOG2619|consen 163 YRRDSDLFVPYGYLEKPEANPVLVPVNSILSAKTKLAAWLVSNCI---PRSARLDYYKELMKHLEID-SYGECLRKNANR 238 (372)
T ss_pred EeccCCCCCccceEeecccCceecccccccccccceeeeeccccC---cchHHHHHHHHHHhhCcee-eccccccccccC
Confidence 44566777777533221 1110 1 111345566666665543 3456777777766542222 134322 1
Q ss_pred CCcchhhhcccCCcEEEeeCC---CCCCCchHHHHHhcCceeEEeeCCcccCccCCCCCCcEEEEEeccccchhhhHHHH
Q 011152 347 DGVKNAGQGMASSKFCLNIAG---DTPSSNRLFDAIASHCVPVIISDEIELPFEDVLDYSEFCITVHSTDAIKKGFLLNL 423 (492)
Q Consensus 347 ~~~~~y~~~m~~S~FCL~P~G---d~~~s~RlfDAi~aGCIPViisd~~~LPF~dvlDw~~fSV~I~e~dv~~~~~l~~i 423 (492)
.......+.+..-||=|.-.- ..+-+--|+-|+.+|.|||+++......| +. .+- +|.-+|......|...
T Consensus 239 ~~~~~~~~~~s~YKFyLAfENS~c~DYVTEKfw~al~~gsVPVvlg~~n~e~f---vP-~~S--fI~vdDF~s~~ela~y 312 (372)
T KOG2619|consen 239 DPSDCLLETLSHYKFYLAFENSNCEDYVTEKFWNALDAGSVPVVLGPPNYENF---VP-PDS--FIHVDDFQSPQELAAY 312 (372)
T ss_pred CCCCcceeecccceEEEEecccCCcccccHHHHhhhhcCcccEEECCcccccc---CC-Ccc--eEehhhcCCHHHHHHH
Confidence 223346778889999998543 33457889999999999999998544333 33 232 2444666665568888
Q ss_pred HhCCCHHHHHH
Q 011152 424 LRGIKQEQWTK 434 (492)
Q Consensus 424 L~~I~~~~i~~ 434 (492)
|+.+..++.+-
T Consensus 313 lk~L~~n~~~Y 323 (372)
T KOG2619|consen 313 LKKLDKNPAAY 323 (372)
T ss_pred HHHhhcCHHHH
Confidence 88885544443
No 47
>TIGR03087 stp1 sugar transferase, PEP-CTERM/EpsH1 system associated. Members of this family include a match to the pfam00534 Glycosyl transferases group 1 domain. Nearly all are found in species that encode the PEP-CTERM/exosortase system predicted to act in protein sorting in a number of Gram-negative bacteria. In particular, these transferases are found proximal to a particular variant of exosortase, EpsH1, which appears to travel with a conserved group of genes summarized by Genome Property GenProp0652. The nature of the sugar transferase reaction catalyzed by members of this clade is unknown and may conceivably be variable with respect to substrate by species, but we hypothesize a conserved substrate.
Probab=84.28 E-value=3.2 Score=43.43 Aligned_cols=91 Identities=19% Similarity=0.259 Sum_probs=56.3
Q ss_pred hhhhcccCCcEEEeeC--CCCCCCchHHHHHhcCceeEEeeCCcccCccCCCCCCcEEEEEeccccchhh-hHHHHHhCC
Q 011152 351 NAGQGMASSKFCLNIA--GDTPSSNRLFDAIASHCVPVIISDEIELPFEDVLDYSEFCITVHSTDAIKKG-FLLNLLRGI 427 (492)
Q Consensus 351 ~y~~~m~~S~FCL~P~--Gd~~~s~RlfDAi~aGCIPViisd~~~LPF~dvlDw~~fSV~I~e~dv~~~~-~l~~iL~~I 427 (492)
+....++.+..++.|. |.+. ...+.|||++|| |||.++.- .+.+..-..-.+.++ .+..+.. .|.++|.
T Consensus 290 ~~~~~~~~adv~v~Ps~~~eG~-~~~~lEAma~G~-PVV~t~~~---~~~i~~~~~~g~lv~-~~~~~la~ai~~ll~-- 361 (397)
T TIGR03087 290 DVRPYLAHAAVAVAPLRIARGI-QNKVLEAMAMAK-PVVASPEA---AEGIDALPGAELLVA-ADPADFAAAILALLA-- 361 (397)
T ss_pred CHHHHHHhCCEEEecccccCCc-ccHHHHHHHcCC-CEEecCcc---cccccccCCcceEeC-CCHHHHHHHHHHHHc--
Confidence 4566788899999885 4443 567999999997 99998742 122211123344555 4443311 2334443
Q ss_pred CHHHHHHHHHHHHH-HhhceEec
Q 011152 428 KQEQWTKMWERLKE-VVQHFEYQ 449 (492)
Q Consensus 428 ~~~~i~~Mr~~l~~-v~~~f~y~ 449 (492)
.++...+|.++.++ +...|.|.
T Consensus 362 ~~~~~~~~~~~ar~~v~~~fsw~ 384 (397)
T TIGR03087 362 NPAEREELGQAARRRVLQHYHWP 384 (397)
T ss_pred CHHHHHHHHHHHHHHHHHhCCHH
Confidence 56778889888876 44677664
No 48
>PF13692 Glyco_trans_1_4: Glycosyl transferases group 1; PDB: 3OY2_A 3OY7_B 2Q6V_A 2HY7_A 3CV3_A 3CUY_A.
Probab=84.26 E-value=0.73 Score=40.05 Aligned_cols=60 Identities=22% Similarity=0.250 Sum_probs=34.3
Q ss_pred chhhhcccCCcEEEeeCC-CCCCCchHHHHHhcCceeEEeeCCcccCccCCCCCCcEEEEEecccc
Q 011152 350 KNAGQGMASSKFCLNIAG-DTPSSNRLFDAIASHCVPVIISDEIELPFEDVLDYSEFCITVHSTDA 414 (492)
Q Consensus 350 ~~y~~~m~~S~FCL~P~G-d~~~s~RlfDAi~aGCIPViisd~~~LPF~dvlDw~~fSV~I~e~dv 414 (492)
+++.+.++++.++++|.- +...+..++|+|.+||- ||.++. ++++...-....+.+ ..+.
T Consensus 62 ~e~~~~l~~~dv~l~p~~~~~~~~~k~~e~~~~G~p-vi~~~~---~~~~~~~~~~~~~~~-~~~~ 122 (135)
T PF13692_consen 62 EELPEILAAADVGLIPSRFNEGFPNKLLEAMAAGKP-VIASDN---GAEGIVEEDGCGVLV-ANDP 122 (135)
T ss_dssp HHHHHHHHC-SEEEE-BSS-SCC-HHHHHHHCTT---EEEEHH---HCHCHS---SEEEE--TT-H
T ss_pred HHHHHHHHhCCEEEEEeeCCCcCcHHHHHHHHhCCC-EEECCc---chhhheeecCCeEEE-CCCH
Confidence 468889999999999973 23457899999999975 555554 344444334555555 4443
No 49
>cd03795 GT1_like_4 This family is most closely related to the GT1 family of glycosyltransferases. Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP-linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homolog
Probab=83.51 E-value=2.7 Score=42.09 Aligned_cols=95 Identities=17% Similarity=0.073 Sum_probs=57.7
Q ss_pred chhhhcccCCcEEEeeCC--CCCCCchHHHHHhcCceeEEeeCCcccCccCCCCCCcEEEEEeccccchhh-hHHHHHhC
Q 011152 350 KNAGQGMASSKFCLNIAG--DTPSSNRLFDAIASHCVPVIISDEIELPFEDVLDYSEFCITVHSTDAIKKG-FLLNLLRG 426 (492)
Q Consensus 350 ~~y~~~m~~S~FCL~P~G--d~~~s~RlfDAi~aGCIPViisd~~~LPF~dvlDw~~fSV~I~e~dv~~~~-~l~~iL~~ 426 (492)
.++.+.++.+..+++|.- .......+.|||.+| +|||.++.-..+ +.+.+.......++..|..... .|..++.
T Consensus 255 ~~~~~~~~~ad~~i~ps~~~~e~~g~~~~Ea~~~g-~Pvi~~~~~~~~-~~i~~~~~~g~~~~~~d~~~~~~~i~~l~~- 331 (357)
T cd03795 255 EEKAALLAACDVFVFPSVERSEAFGIVLLEAMAFG-KPVISTEIGTGG-SYVNLHGVTGLVVPPGDPAALAEAIRRLLE- 331 (357)
T ss_pred HHHHHHHHhCCEEEeCCcccccccchHHHHHHHcC-CCEEecCCCCch-hHHhhCCCceEEeCCCCHHHHHHHHHHHHH-
Confidence 356778888999999852 123356799999997 577777643222 1112224555566656654311 1333333
Q ss_pred CCHHHHHHHHHHHHHHh-hceEe
Q 011152 427 IKQEQWTKMWERLKEVV-QHFEY 448 (492)
Q Consensus 427 I~~~~i~~Mr~~l~~v~-~~f~y 448 (492)
.+++..+|.++.++.. ++|.+
T Consensus 332 -~~~~~~~~~~~~~~~~~~~~s~ 353 (357)
T cd03795 332 -DPELRERLGEAARERAEEEFTA 353 (357)
T ss_pred -CHHHHHHHHHHHHHHHHHhcch
Confidence 6788899999988754 44443
No 50
>cd03813 GT1_like_3 This family is most closely related to the GT1 family of glycosyltransferases. Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homolog
Probab=83.47 E-value=4 Score=44.21 Aligned_cols=90 Identities=17% Similarity=0.154 Sum_probs=57.2
Q ss_pred chhhhcccCCcEEEeeCCCCCCCchHHHHHhcCceeEEeeCCcccCccCCCCC------CcEEEEEeccccchhh-hHHH
Q 011152 350 KNAGQGMASSKFCLNIAGDTPSSNRLFDAIASHCVPVIISDEIELPFEDVLDY------SEFCITVHSTDAIKKG-FLLN 422 (492)
Q Consensus 350 ~~y~~~m~~S~FCL~P~Gd~~~s~RlfDAi~aGCIPViisd~~~LPF~dvlDw------~~fSV~I~e~dv~~~~-~l~~ 422 (492)
.+..+.|..+..++.|.-.......++|||++|| |||.+|.--. .++++- ....+.++..|..... .|..
T Consensus 362 ~~v~~~l~~aDv~vlpS~~Eg~p~~vlEAma~G~-PVVatd~g~~--~elv~~~~~~~~g~~G~lv~~~d~~~la~ai~~ 438 (475)
T cd03813 362 QNVKEYLPKLDVLVLTSISEGQPLVILEAMAAGI-PVVATDVGSC--RELIEGADDEALGPAGEVVPPADPEALARAILR 438 (475)
T ss_pred ccHHHHHHhCCEEEeCchhhcCChHHHHHHHcCC-CEEECCCCCh--HHHhcCCcccccCCceEEECCCCHHHHHHHHHH
Confidence 3456778888888888644444678999999998 8888764221 122222 2356677777755422 1334
Q ss_pred HHhCCCHHHHHHHHHHHHHHhh
Q 011152 423 LLRGIKQEQWTKMWERLKEVVQ 444 (492)
Q Consensus 423 iL~~I~~~~i~~Mr~~l~~v~~ 444 (492)
+|. +++...+|.++.++...
T Consensus 439 ll~--~~~~~~~~~~~a~~~v~ 458 (475)
T cd03813 439 LLK--DPELRRAMGEAGRKRVE 458 (475)
T ss_pred Hhc--CHHHHHHHHHHHHHHHH
Confidence 443 57788888888876433
No 51
>PRK00654 glgA glycogen synthase; Provisional
Probab=83.40 E-value=6.9 Score=42.25 Aligned_cols=93 Identities=17% Similarity=0.199 Sum_probs=54.8
Q ss_pred hhhcccCCcEEEeeCCCCCCCchHHHHHhcCceeEEeeCCcccCccCCCCCC-----cEEEEEeccccchhh-hHHHHHh
Q 011152 352 AGQGMASSKFCLNIAGDTPSSNRLFDAIASHCVPVIISDEIELPFEDVLDYS-----EFCITVHSTDAIKKG-FLLNLLR 425 (492)
Q Consensus 352 y~~~m~~S~FCL~P~Gd~~~s~RlfDAi~aGCIPViisd~~~LPF~dvlDw~-----~fSV~I~e~dv~~~~-~l~~iL~ 425 (492)
....++.+.+++.|.=..+......|||.+||+||+-..+ -++ +-+.|.. .-.+.++..|..... .|..+|.
T Consensus 350 ~~~~~~~aDv~v~PS~~E~~gl~~lEAma~G~p~V~~~~g-G~~-e~v~~~~~~~~~~~G~lv~~~d~~~la~~i~~~l~ 427 (466)
T PRK00654 350 AHRIYAGADMFLMPSRFEPCGLTQLYALRYGTLPIVRRTG-GLA-DTVIDYNPEDGEATGFVFDDFNAEDLLRALRRALE 427 (466)
T ss_pred HHHHHhhCCEEEeCCCCCCchHHHHHHHHCCCCEEEeCCC-Ccc-ceeecCCCCCCCCceEEeCCCCHHHHHHHHHHHHH
Confidence 4467899999999987777788899999999988774322 111 1122321 345667766654311 1333332
Q ss_pred CC-CHHHHHHHHHHHHHHhhceEe
Q 011152 426 GI-KQEQWTKMWERLKEVVQHFEY 448 (492)
Q Consensus 426 ~I-~~~~i~~Mr~~l~~v~~~f~y 448 (492)
.. .++.+.+|.++..+ ..|.|
T Consensus 428 ~~~~~~~~~~~~~~~~~--~~fsw 449 (466)
T PRK00654 428 LYRQPPLWRALQRQAMA--QDFSW 449 (466)
T ss_pred HhcCHHHHHHHHHHHhc--cCCCh
Confidence 11 34556677665532 44444
No 52
>cd03825 GT1_wcfI_like This family is most closely related to the GT1 family of glycosyltransferases. wcfI in Bacteroides fragilis has been shown to be involved in the capsular polysaccharide biosynthesis.
Probab=83.26 E-value=3.8 Score=41.15 Aligned_cols=92 Identities=14% Similarity=0.098 Sum_probs=59.2
Q ss_pred hhhhcccCCcEEEeeCCCCCCCchHHHHHhcCceeEEeeCCcccCccCCCCCCcEEEEEeccccchhh-hHHHHHhCCCH
Q 011152 351 NAGQGMASSKFCLNIAGDTPSSNRLFDAIASHCVPVIISDEIELPFEDVLDYSEFCITVHSTDAIKKG-FLLNLLRGIKQ 429 (492)
Q Consensus 351 ~y~~~m~~S~FCL~P~Gd~~~s~RlfDAi~aGCIPViisd~~~LPF~dvlDw~~fSV~I~e~dv~~~~-~l~~iL~~I~~ 429 (492)
++.+.|+.|.+.+.|......+..++|||.+||- ||..+.- +..+++.-.+-.+.++..|..+.. .|.+++. .+
T Consensus 257 ~~~~~~~~ad~~l~ps~~e~~g~~~~Eam~~g~P-vI~~~~~--~~~e~~~~~~~g~~~~~~~~~~~~~~l~~l~~--~~ 331 (365)
T cd03825 257 SLALIYSAADVFVVPSLQENFPNTAIEALACGTP-VVAFDVG--GIPDIVDHGVTGYLAKPGDPEDLAEGIEWLLA--DP 331 (365)
T ss_pred HHHHHHHhCCEEEeccccccccHHHHHHHhcCCC-EEEecCC--CChhheeCCCceEEeCCCCHHHHHHHHHHHHh--CH
Confidence 4567799999999998777678899999999974 6666542 233444333455566655543311 1334443 56
Q ss_pred HHHHHHHHHHHHHh-hceE
Q 011152 430 EQWTKMWERLKEVV-QHFE 447 (492)
Q Consensus 430 ~~i~~Mr~~l~~v~-~~f~ 447 (492)
++..+|.++.++.. +.|.
T Consensus 332 ~~~~~~~~~~~~~~~~~~s 350 (365)
T cd03825 332 DEREELGEAARELAENEFD 350 (365)
T ss_pred HHHHHHHHHHHHHHHHhcC
Confidence 67888888877644 3443
No 53
>cd03799 GT1_amsK_like This is a family of GT1 glycosyltransferases found specifically in certain bacteria. amsK in Erwinia amylovora, has been reported to be involved in the biosynthesis of amylovoran, a exopolysaccharide acting as a virulence factor.
Probab=83.03 E-value=3 Score=41.66 Aligned_cols=94 Identities=14% Similarity=0.101 Sum_probs=57.6
Q ss_pred chhhhcccCCcEEEeeCCC------CCCCchHHHHHhcCceeEEeeCCcccCccCCCCCCcEEEEEeccccchhh-hHHH
Q 011152 350 KNAGQGMASSKFCLNIAGD------TPSSNRLFDAIASHCVPVIISDEIELPFEDVLDYSEFCITVHSTDAIKKG-FLLN 422 (492)
Q Consensus 350 ~~y~~~m~~S~FCL~P~Gd------~~~s~RlfDAi~aGCIPViisd~~~LPF~dvlDw~~fSV~I~e~dv~~~~-~l~~ 422 (492)
.+..+.++++.+++.|... ......++|||.+||-.| .++.-. ..+++.=..-...+++.+..+.. .|..
T Consensus 247 ~~l~~~~~~adi~l~~s~~~~~~~~e~~~~~~~Ea~a~G~Pvi-~~~~~~--~~~~i~~~~~g~~~~~~~~~~l~~~i~~ 323 (355)
T cd03799 247 EEVRELLRAADLFVLPSVTAADGDREGLPVVLMEAMAMGLPVI-STDVSG--IPELVEDGETGLLVPPGDPEALADAIER 323 (355)
T ss_pred HHHHHHHHhCCEEEecceecCCCCccCccHHHHHHHHcCCCEE-ecCCCC--cchhhhCCCceEEeCCCCHHHHHHHHHH
Confidence 4567788999999998654 344788999999998654 454322 23344333345556655544311 1334
Q ss_pred HHhCCCHHHHHHHHHHHHHH-hhceEe
Q 011152 423 LLRGIKQEQWTKMWERLKEV-VQHFEY 448 (492)
Q Consensus 423 iL~~I~~~~i~~Mr~~l~~v-~~~f~y 448 (492)
++. .+++..+|.++.++. ...|.+
T Consensus 324 ~~~--~~~~~~~~~~~a~~~~~~~~s~ 348 (355)
T cd03799 324 LLD--DPELRREMGEAGRARVEEEFDI 348 (355)
T ss_pred HHh--CHHHHHHHHHHHHHHHHHhcCH
Confidence 443 466688888887753 345544
No 54
>TIGR02472 sucr_P_syn_N sucrose-phosphate synthase, putative, glycosyltransferase domain. This family consists of the N-terminal regions, or in some cases the entirety, of bacterial proteins closely related to plant sucrose-phosphate synthases (SPS). The C-terminal domain (TIGR02471), found with most members of this family, resembles both bona fide plant sucrose-phosphate phosphatases (SPP) and the SPP-like domain of plant SPS. At least two members of this family lack the SPP-like domain, which may have binding or regulatory rather than enzymatic activity by analogy to plant SPS. This enzyme produces sucrose 6-phosphate and UDP from UDP-glucose and D-fructose 6-phosphate, and may be encoded near the gene for fructokinase.
Probab=81.79 E-value=2.2 Score=45.69 Aligned_cols=85 Identities=21% Similarity=0.250 Sum_probs=53.0
Q ss_pred cEEEeeCCCCCCCchHHHHHhcCceeEEeeCCcccCccCCCCCCcEEEEEeccccchhh-hHHHHHhCCCHHHHHHHHHH
Q 011152 360 KFCLNIAGDTPSSNRLFDAIASHCVPVIISDEIELPFEDVLDYSEFCITVHSTDAIKKG-FLLNLLRGIKQEQWTKMWER 438 (492)
Q Consensus 360 ~FCL~P~Gd~~~s~RlfDAi~aGCIPViisd~~~LPF~dvlDw~~fSV~I~e~dv~~~~-~l~~iL~~I~~~~i~~Mr~~ 438 (492)
..++.|.-......-+.|||++|| |||.++.-- ..++++-.+-.+.++..|..... .|.++|. ++++..+|.++
T Consensus 342 Dv~v~pS~~E~fg~~~lEAma~G~-PvV~s~~gg--~~eiv~~~~~G~lv~~~d~~~la~~i~~ll~--~~~~~~~~~~~ 416 (439)
T TIGR02472 342 GIFVNPALTEPFGLTLLEAAACGL-PIVATDDGG--PRDIIANCRNGLLVDVLDLEAIASALEDALS--DSSQWQLWSRN 416 (439)
T ss_pred CEEecccccCCcccHHHHHHHhCC-CEEEeCCCC--cHHHhcCCCcEEEeCCCCHHHHHHHHHHHHh--CHHHHHHHHHH
Confidence 444455444445678999999999 999998532 23445444456677777654421 1334443 56677778777
Q ss_pred HHH-HhhceEec
Q 011152 439 LKE-VVQHFEYQ 449 (492)
Q Consensus 439 l~~-v~~~f~y~ 449 (492)
.++ +..+|.|.
T Consensus 417 a~~~~~~~fsw~ 428 (439)
T TIGR02472 417 GIEGVRRHYSWD 428 (439)
T ss_pred HHHHHHHhCCHH
Confidence 765 55667664
No 55
>PRK14098 glycogen synthase; Provisional
Probab=81.56 E-value=9 Score=41.96 Aligned_cols=95 Identities=13% Similarity=0.069 Sum_probs=55.6
Q ss_pred hhhhcccCCcEEEeeCCCCCCCchHHHHHhcCceeEEeeCCcccCccCCCCC---CcEEEEEeccccchhh-hHHHHHhC
Q 011152 351 NAGQGMASSKFCLNIAGDTPSSNRLFDAIASHCVPVIISDEIELPFEDVLDY---SEFCITVHSTDAIKKG-FLLNLLRG 426 (492)
Q Consensus 351 ~y~~~m~~S~FCL~P~Gd~~~s~RlfDAi~aGCIPViisd~~~LPF~dvlDw---~~fSV~I~e~dv~~~~-~l~~iL~~ 426 (492)
...+.++.+.+++.|.-..+......|||.+||+||+...+- ++ +.+.|+ ..-.+.++..|..... .|..+|+-
T Consensus 374 ~~~~~~a~aDi~l~PS~~E~~Gl~~lEAma~G~ppVv~~~GG-l~-d~v~~~~~~~~~G~l~~~~d~~~la~ai~~~l~~ 451 (489)
T PRK14098 374 FFHLAIAGLDMLLMPGKIESCGMLQMFAMSYGTIPVAYAGGG-IV-ETIEEVSEDKGSGFIFHDYTPEALVAKLGEALAL 451 (489)
T ss_pred HHHHHHHhCCEEEeCCCCCCchHHHHHHHhCCCCeEEecCCC-Cc-eeeecCCCCCCceeEeCCCCHHHHHHHHHHHHHH
Confidence 346778999999999877777888999999999999865431 11 111121 2334556666644311 12222221
Q ss_pred C-CHHHHHHHHHHHHHHhhceEec
Q 011152 427 I-KQEQWTKMWERLKEVVQHFEYQ 449 (492)
Q Consensus 427 I-~~~~i~~Mr~~l~~v~~~f~y~ 449 (492)
. .++++.+|+++. +...|.|.
T Consensus 452 ~~~~~~~~~~~~~~--~~~~fsw~ 473 (489)
T PRK14098 452 YHDEERWEELVLEA--MERDFSWK 473 (489)
T ss_pred HcCHHHHHHHHHHH--hcCCCChH
Confidence 1 456666666543 23445543
No 56
>cd03812 GT1_CapH_like This family is most closely related to the GT1 family of glycosyltransferases. capH in Staphylococcus aureus has been shown to be required for the biosynthesis of the type 1 capsular polysaccharide (CP1).
Probab=81.12 E-value=9.3 Score=38.31 Aligned_cols=41 Identities=20% Similarity=0.054 Sum_probs=32.9
Q ss_pred chhhhcccCCcEEEeeCCCCCCCchHHHHHhcCceeEEeeCC
Q 011152 350 KNAGQGMASSKFCLNIAGDTPSSNRLFDAIASHCVPVIISDE 391 (492)
Q Consensus 350 ~~y~~~m~~S~FCL~P~Gd~~~s~RlfDAi~aGCIPViisd~ 391 (492)
++..+.+..+.++++|.-.......+.|||++||- ||.++.
T Consensus 258 ~~~~~~~~~adi~v~ps~~E~~~~~~lEAma~G~P-vI~s~~ 298 (358)
T cd03812 258 NDVPELLQAMDVFLFPSLYEGLPLVLIEAQASGLP-CILSDT 298 (358)
T ss_pred CCHHHHHHhcCEEEecccccCCCHHHHHHHHhCCC-EEEEcC
Confidence 45677899999999998766678899999999985 455553
No 57
>PRK14099 glycogen synthase; Provisional
Probab=80.71 E-value=3.8 Score=44.77 Aligned_cols=92 Identities=16% Similarity=0.175 Sum_probs=56.8
Q ss_pred hhhhcc-cCCcEEEeeCCCCCCCchHHHHHhcCceeEEeeCCcccCccCCCCCC--------cEEEEEeccccchhhhHH
Q 011152 351 NAGQGM-ASSKFCLNIAGDTPSSNRLFDAIASHCVPVIISDEIELPFEDVLDYS--------EFCITVHSTDAIKKGFLL 421 (492)
Q Consensus 351 ~y~~~m-~~S~FCL~P~Gd~~~s~RlfDAi~aGCIPViisd~~~LPF~dvlDw~--------~fSV~I~e~dv~~~~~l~ 421 (492)
+....+ +.+.+.+.|.=..+......|||++||+||+ ++.--+| +-+.|.. .-.+.++..|... +.
T Consensus 361 ~l~~~~~a~aDifv~PS~~E~fGl~~lEAma~G~ppVv-s~~GGl~-d~V~~~~~~~~~~~~~~G~l~~~~d~~~---La 435 (485)
T PRK14099 361 ALAHLIQAGADALLVPSRFEPCGLTQLCALRYGAVPVV-ARVGGLA-DTVVDANEMAIATGVATGVQFSPVTADA---LA 435 (485)
T ss_pred HHHHHHHhcCCEEEECCccCCCcHHHHHHHHCCCCcEE-eCCCCcc-ceeecccccccccCCCceEEeCCCCHHH---HH
Confidence 344555 4688888898777778899999999999988 4421122 1223432 2456677666543 33
Q ss_pred HHHhC----C-CHHHHHHHHHHHHHHhhceEec
Q 011152 422 NLLRG----I-KQEQWTKMWERLKEVVQHFEYQ 449 (492)
Q Consensus 422 ~iL~~----I-~~~~i~~Mr~~l~~v~~~f~y~ 449 (492)
+.|.. + .++.+.+|+++.. .+.|.|.
T Consensus 436 ~ai~~a~~l~~d~~~~~~l~~~~~--~~~fSw~ 466 (485)
T PRK14099 436 AALRKTAALFADPVAWRRLQRNGM--TTDVSWR 466 (485)
T ss_pred HHHHHHHHHhcCHHHHHHHHHHhh--hhcCChH
Confidence 33321 2 4677788888764 3556554
No 58
>PHA01630 putative group 1 glycosyl transferase
Probab=79.98 E-value=3.9 Score=42.44 Aligned_cols=41 Identities=10% Similarity=0.089 Sum_probs=31.6
Q ss_pred chhhhcccCCcEEEeeCCCCCCCchHHHHHhcCceeEEeeCC
Q 011152 350 KNAGQGMASSKFCLNIAGDTPSSNRLFDAIASHCVPVIISDE 391 (492)
Q Consensus 350 ~~y~~~m~~S~FCL~P~Gd~~~s~RlfDAi~aGCIPViisd~ 391 (492)
++..+.++.+..++.|.-......-+.|||++|| |||.++.
T Consensus 201 ~~l~~~y~~aDv~v~pS~~E~fgl~~lEAMA~G~-PVIas~~ 241 (331)
T PHA01630 201 DDIYSLFAGCDILFYPVRGGAFEIPVIEALALGL-DVVVTEK 241 (331)
T ss_pred HHHHHHHHhCCEEEECCccccCChHHHHHHHcCC-CEEEeCC
Confidence 4556778999999998655555777999999997 6666664
No 59
>cd03796 GT1_PIG-A_like This family is most closely related to the GT1 family of glycosyltransferases. Phosphatidylinositol glycan-class A (PIG-A), an X-linked gene in humans, is necessary for the synthesis of N-acetylglucosaminyl-phosphatidylinositol, a very early intermediate in glycosyl phosphatidylinositol (GPI)-anchor biosynthesis. The GPI-anchor is an important cellular structure that facilitates the attachment of many proteins to cell surfaces. Somatic mutations in PIG-A have been associated with Paroxysmal Nocturnal Hemoglobinuria (PNH), an acquired hematological disorder.
Probab=79.36 E-value=5.9 Score=41.43 Aligned_cols=94 Identities=12% Similarity=0.138 Sum_probs=54.4
Q ss_pred chhhhcccCCcEEEeeCCCCCCCchHHHHHhcCceeEEeeCCcccCccCCCCCCcEEEEEeccccchh-hhHHHHHhCCC
Q 011152 350 KNAGQGMASSKFCLNIAGDTPSSNRLFDAIASHCVPVIISDEIELPFEDVLDYSEFCITVHSTDAIKK-GFLLNLLRGIK 428 (492)
Q Consensus 350 ~~y~~~m~~S~FCL~P~Gd~~~s~RlfDAi~aGCIPViisd~~~LPF~dvlDw~~fSV~I~e~dv~~~-~~l~~iL~~I~ 428 (492)
++..+.+..+..++.|.-.......+.|||++|| |||.++.-..+ +++.-. ..+.++. |.... ..|.++|...
T Consensus 261 ~~~~~~l~~ad~~v~pS~~E~~g~~~~EAma~G~-PVI~s~~gg~~--e~i~~~-~~~~~~~-~~~~l~~~l~~~l~~~- 334 (398)
T cd03796 261 ERVRDVLVQGHIFLNTSLTEAFCIAIVEAASCGL-LVVSTRVGGIP--EVLPPD-MILLAEP-DVESIVRKLEEAISIL- 334 (398)
T ss_pred HHHHHHHHhCCEEEeCChhhccCHHHHHHHHcCC-CEEECCCCCch--hheeCC-ceeecCC-CHHHHHHHHHHHHhCh-
Confidence 4667788889998888654445678999999997 56666653332 444422 3444443 43221 1244555432
Q ss_pred HHHHHHHHHHHHHHhhceEec
Q 011152 429 QEQWTKMWERLKEVVQHFEYQ 449 (492)
Q Consensus 429 ~~~i~~Mr~~l~~v~~~f~y~ 449 (492)
.++...+++...++..+|.|.
T Consensus 335 ~~~~~~~~~~~~~~~~~fs~~ 355 (398)
T cd03796 335 RTGKHDPWSFHNRVKKMYSWE 355 (398)
T ss_pred hhhhhHHHHHHHHHHhhCCHH
Confidence 223233344445577777775
No 60
>cd04946 GT1_AmsK_like This family is most closely related to the GT1 family of glycosyltransferases. AmsK is involved in the biosynthesis of amylovoran, which functions as a virulence factor. It functions as a glycosyl transferase which transfers galactose from UDP-galactose to a lipid-linked amylovoran-subunit precursor. The members of this family are found mainly in bacteria and Archaea.
Probab=79.27 E-value=6.2 Score=41.79 Aligned_cols=92 Identities=14% Similarity=0.225 Sum_probs=52.7
Q ss_pred hhhhcccCC--cEEEeeCCCCCCCchHHHHHhcCceeEEeeCCcccCccCCCCCCcEEEEEecc-ccchhh-hHHHHHhC
Q 011152 351 NAGQGMASS--KFCLNIAGDTPSSNRLFDAIASHCVPVIISDEIELPFEDVLDYSEFCITVHST-DAIKKG-FLLNLLRG 426 (492)
Q Consensus 351 ~y~~~m~~S--~FCL~P~Gd~~~s~RlfDAi~aGCIPViisd~~~LPF~dvlDw~~fSV~I~e~-dv~~~~-~l~~iL~~ 426 (492)
+..+.++.+ ...+.|.-.......+.|||++|+ |||.++.--.| ++++=..-.+.++.. +..+.. .|..++.
T Consensus 301 e~~~~~~~~~~~v~v~~S~~Eg~p~~llEAma~G~-PVIas~vgg~~--e~i~~~~~G~l~~~~~~~~~la~~I~~ll~- 376 (407)
T cd04946 301 EVYKLYKENPVDVFVNLSESEGLPVSIMEAMSFGI-PVIATNVGGTP--EIVDNGGNGLLLSKDPTPNELVSSLSKFID- 376 (407)
T ss_pred HHHHHHhhcCCCEEEeCCccccccHHHHHHHHcCC-CEEeCCCCCcH--HHhcCCCcEEEeCCCCCHHHHHHHHHHHHh-
Confidence 344555543 333334433334678999999995 99988743333 344433334455542 333311 2444444
Q ss_pred CCHHHHHHHHHHHHHHh-hceE
Q 011152 427 IKQEQWTKMWERLKEVV-QHFE 447 (492)
Q Consensus 427 I~~~~i~~Mr~~l~~v~-~~f~ 447 (492)
++++..+|+++.++.+ ++|.
T Consensus 377 -~~~~~~~m~~~ar~~~~~~f~ 397 (407)
T cd04946 377 -NEEEYQTMREKAREKWEENFN 397 (407)
T ss_pred -CHHHHHHHHHHHHHHHHHHcC
Confidence 6889999999988755 4443
No 61
>cd03793 GT1_Glycogen_synthase_GSY2_like Glycogen synthase, which is most closely related to the GT1 family of glycosyltransferases, catalyzes the transfer of a glucose molecule from UDP-glucose to a terminal branch of a glycogen molecule, a rate-limit step of glycogen biosynthesis. GSY2, the member of this family in S. cerevisiae, has been shown to possess glycogen synthase activity.
Probab=78.57 E-value=2.7 Score=47.02 Aligned_cols=111 Identities=8% Similarity=0.073 Sum_probs=68.7
Q ss_pred chhhhcccCCcEEEeeCCCCCCCchHHHHHhcCceeEEeeCCcccC---ccCCCCCCcEEEEEeccc-------cchhh-
Q 011152 350 KNAGQGMASSKFCLNIAGDTPSSNRLFDAIASHCVPVIISDEIELP---FEDVLDYSEFCITVHSTD-------AIKKG- 418 (492)
Q Consensus 350 ~~y~~~m~~S~FCL~P~Gd~~~s~RlfDAi~aGCIPViisd~~~LP---F~dvlDw~~fSV~I~e~d-------v~~~~- 418 (492)
.+|.+.++.+.-++.|.-+.+.+.-..|||++| +|||.++.--++ -+-+-+-.+..|.|...+ +.+..
T Consensus 466 ~~y~E~~~g~dl~v~PS~yE~fG~~~lEAma~G-~PvI~t~~~gf~~~v~E~v~~~~~~gi~V~~r~~~~~~e~v~~La~ 544 (590)
T cd03793 466 LDYEEFVRGCHLGVFPSYYEPWGYTPAECTVMG-IPSITTNLSGFGCFMEEHIEDPESYGIYIVDRRFKSPDESVQQLTQ 544 (590)
T ss_pred cchHHHhhhceEEEeccccCCCCcHHHHHHHcC-CCEEEccCcchhhhhHHHhccCCCceEEEecCCccchHHHHHHHHH
Confidence 358889999999999988888888999999999 699999875442 122223435677776322 21111
Q ss_pred hHHHHHhCCCHHHHHHHHHHHHHHhhceEecCCCCC-CCHHHHHH
Q 011152 419 FLLNLLRGIKQEQWTKMWERLKEVVQHFEYQYPSQP-GDAVDMIW 462 (492)
Q Consensus 419 ~l~~iL~~I~~~~i~~Mr~~l~~v~~~f~y~~p~~~-~DAf~~il 462 (492)
.|..++ .-+..+....|....++...|.|..-... ..|.+.++
T Consensus 545 ~m~~~~-~~~~r~~~~~r~~~~r~s~~f~W~~~~~~Y~~A~~~Al 588 (590)
T cd03793 545 YMYEFC-QLSRRQRIIQRNRTERLSDLLDWRNLGRYYRKARQLAL 588 (590)
T ss_pred HHHHHh-CCcHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHh
Confidence 133334 33545555445444578888888643221 24555554
No 62
>PRK15490 Vi polysaccharide biosynthesis protein TviE; Provisional
Probab=77.01 E-value=14 Score=41.48 Aligned_cols=61 Identities=11% Similarity=0.058 Sum_probs=43.0
Q ss_pred hhhhcccCCcEEEeeCCCCCCCchHHHHHhcCceeEEeeCCcccCccCCCCCCcEEEEEecccc
Q 011152 351 NAGQGMASSKFCLNIAGDTPSSNRLFDAIASHCVPVIISDEIELPFEDVLDYSEFCITVHSTDA 414 (492)
Q Consensus 351 ~y~~~m~~S~FCL~P~Gd~~~s~RlfDAi~aGCIPViisd~~~LPF~dvlDw~~fSV~I~e~dv 414 (492)
+..+.|..+..++.|.-.......+.|||.+|| |||.++.--.| +++.-..-.+.++..|.
T Consensus 465 Dv~~~LaaADVfVlPS~~EGfp~vlLEAMA~Gl-PVVATdvGG~~--EiV~dG~nG~LVp~~D~ 525 (578)
T PRK15490 465 DVGYWLQKMNVFILFSRYEGLPNVLIEAQMVGV-PVISTPAGGSA--ECFIEGVSGFILDDAQT 525 (578)
T ss_pred hHHHHHHhCCEEEEcccccCccHHHHHHHHhCC-CEEEeCCCCcH--HHcccCCcEEEECCCCh
Confidence 456678888888888666666889999999998 99988753333 33333445556676664
No 63
>cd03791 GT1_Glycogen_synthase_DULL1_like This family is most closely related to the GT1 family of glycosyltransferases. Glycogen synthase catalyzes the formation and elongation of the alpha-1,4-glucose backbone using ADP-glucose, the second and key step of glycogen biosynthesis. This family includes starch synthases of plants, such as DULL1 in Zea mays and glycogen synthases of various organisms.
Probab=74.49 E-value=17 Score=38.96 Aligned_cols=87 Identities=21% Similarity=0.187 Sum_probs=52.0
Q ss_pred hhhcccCCcEEEeeCCCCCCCchHHHHHhcCceeEEeeCCcccCccCCCCCC-----cEEEEEeccccchhh-hHHHHHh
Q 011152 352 AGQGMASSKFCLNIAGDTPSSNRLFDAIASHCVPVIISDEIELPFEDVLDYS-----EFCITVHSTDAIKKG-FLLNLLR 425 (492)
Q Consensus 352 y~~~m~~S~FCL~P~Gd~~~s~RlfDAi~aGCIPViisd~~~LPF~dvlDw~-----~fSV~I~e~dv~~~~-~l~~iL~ 425 (492)
..+.++.+.+.+.|.-..+......|||++||.||.-..+ -++ +-+.|.. .-.+.++..+..... .|..+|.
T Consensus 364 ~~~~~~~aDv~l~pS~~E~~gl~~lEAma~G~pvI~~~~g-g~~-e~v~~~~~~~~~~~G~~~~~~~~~~l~~~i~~~l~ 441 (476)
T cd03791 364 AHLIYAGADFFLMPSRFEPCGLTQMYAMRYGTVPIVRATG-GLA-DTVIDYNEDTGEGTGFVFEGYNADALLAALRRALA 441 (476)
T ss_pred HHHHHHhCCEEECCCCCCCCcHHHHHHhhCCCCCEECcCC-Ccc-ceEeCCcCCCCCCCeEEeCCCCHHHHHHHHHHHHH
Confidence 4567889999999987777788899999999988754322 122 1223332 135556655543311 1333332
Q ss_pred CC-CHHHHHHHHHHHH
Q 011152 426 GI-KQEQWTKMWERLK 440 (492)
Q Consensus 426 ~I-~~~~i~~Mr~~l~ 440 (492)
.. .++++.+|.++..
T Consensus 442 ~~~~~~~~~~~~~~~~ 457 (476)
T cd03791 442 LYRDPEAWRKLQRNAM 457 (476)
T ss_pred HHcCHHHHHHHHHHHh
Confidence 21 3567777777654
No 64
>PHA01633 putative glycosyl transferase group 1
Probab=74.16 E-value=4.9 Score=42.03 Aligned_cols=42 Identities=14% Similarity=0.062 Sum_probs=34.6
Q ss_pred chhhhcccCCcEEEeeCCCCCCCchHHHHHhcCceeEEeeCCc
Q 011152 350 KNAGQGMASSKFCLNIAGDTPSSNRLFDAIASHCVPVIISDEI 392 (492)
Q Consensus 350 ~~y~~~m~~S~FCL~P~Gd~~~s~RlfDAi~aGCIPViisd~~ 392 (492)
++..+.++.+.+.+.|.-......-+.|||++|| |||.++--
T Consensus 215 ~dl~~~y~~aDifV~PS~~EgfGlvlLEAMA~G~-PVVas~~~ 256 (335)
T PHA01633 215 EYIFAFYGAMDFTIVPSGTEGFGMPVLESMAMGT-PVIHQLMP 256 (335)
T ss_pred HHHHHHHHhCCEEEECCccccCCHHHHHHHHcCC-CEEEccCC
Confidence 4566788899998888766667888999999999 99988653
No 65
>TIGR02468 sucrsPsyn_pln sucrose phosphate synthase/possible sucrose phosphate phosphatase, plant. Members of this family are sucrose-phosphate synthases of plants. This enzyme is known to exist in multigene families in several species of both monocots and dicots. The N-terminal domain is the glucosyltransferase domain. Members of this family also have a variable linker region and a C-terminal domain that resembles sucrose phosphate phosphatase (SPP) (EC 3.1.3.24) (see TIGR01485), the next and final enzyme of sucrose biosynthesis. The SPP-like domain likely serves a binding and not a catalytic function, as the reported SPP is always encoded by a distinct protein.
Probab=70.79 E-value=9.5 Score=45.64 Aligned_cols=84 Identities=18% Similarity=0.221 Sum_probs=55.8
Q ss_pred EEEeeCCCCCCCchHHHHHhcCceeEEeeCCcccCccCCCCCCcEEEEEeccccchhh-hHHHHHhCCCHHHHHHHHHHH
Q 011152 361 FCLNIAGDTPSSNRLFDAIASHCVPVIISDEIELPFEDVLDYSEFCITVHSTDAIKKG-FLLNLLRGIKQEQWTKMWERL 439 (492)
Q Consensus 361 FCL~P~Gd~~~s~RlfDAi~aGCIPViisd~~~LPF~dvlDw~~fSV~I~e~dv~~~~-~l~~iL~~I~~~~i~~Mr~~l 439 (492)
.++.|.=..+...-+.|||++| +|||.++.-- ..+++.-..-.+.|+..|..... .|..+|. .++...+|.++.
T Consensus 574 VFV~PS~~EgFGLvlLEAMAcG-lPVVASdvGG--~~EII~~g~nGlLVdP~D~eaLA~AL~~LL~--Dpelr~~m~~~g 648 (1050)
T TIGR02468 574 VFINPAFIEPFGLTLIEAAAHG-LPMVATKNGG--PVDIHRVLDNGLLVDPHDQQAIADALLKLVA--DKQLWAECRQNG 648 (1050)
T ss_pred eeeCCcccCCCCHHHHHHHHhC-CCEEEeCCCC--cHHHhccCCcEEEECCCCHHHHHHHHHHHhh--CHHHHHHHHHHH
Confidence 4455655555678899999999 5999997532 23445445567778877754422 1334443 577789999998
Q ss_pred HHHhhceEec
Q 011152 440 KEVVQHFEYQ 449 (492)
Q Consensus 440 ~~v~~~f~y~ 449 (492)
++..+.|.|.
T Consensus 649 r~~v~~FSWe 658 (1050)
T TIGR02468 649 LKNIHLFSWP 658 (1050)
T ss_pred HHHHHHCCHH
Confidence 8877776664
No 66
>PRK13608 diacylglycerol glucosyltransferase; Provisional
Probab=67.40 E-value=35 Score=35.95 Aligned_cols=84 Identities=18% Similarity=0.234 Sum_probs=50.3
Q ss_pred hhhhcccCCcEEEeeCCCCCCCchHHHHHhcCceeEEeeCCcccCccCCCC-----CCcEEEEEeccccchhh-hHHHHH
Q 011152 351 NAGQGMASSKFCLNIAGDTPSSNRLFDAIASHCVPVIISDEIELPFEDVLD-----YSEFCITVHSTDAIKKG-FLLNLL 424 (492)
Q Consensus 351 ~y~~~m~~S~FCL~P~Gd~~~s~RlfDAi~aGCIPViisd~~~LPF~dvlD-----w~~fSV~I~e~dv~~~~-~l~~iL 424 (492)
+..+.|+.|.+++..+| ...+.|||++| +|||+.+.. |-++..+ =..+.+.+. +..+.. .|.++|
T Consensus 266 ~~~~~~~~aDl~I~k~g----g~tl~EA~a~G-~PvI~~~~~--pgqe~~N~~~~~~~G~g~~~~--~~~~l~~~i~~ll 336 (391)
T PRK13608 266 HMNEWMASSQLMITKPG----GITISEGLARC-IPMIFLNPA--PGQELENALYFEEKGFGKIAD--TPEEAIKIVASLT 336 (391)
T ss_pred hHHHHHHhhhEEEeCCc----hHHHHHHHHhC-CCEEECCCC--CCcchhHHHHHHhCCcEEEeC--CHHHHHHHHHHHh
Confidence 45678899999887544 23589999999 588887642 3322211 223444433 222211 133344
Q ss_pred hCCCHHHHHHHHHHHHHHhhc
Q 011152 425 RGIKQEQWTKMWERLKEVVQH 445 (492)
Q Consensus 425 ~~I~~~~i~~Mr~~l~~v~~~ 445 (492)
. .+++..+|+++..+..+.
T Consensus 337 ~--~~~~~~~m~~~~~~~~~~ 355 (391)
T PRK13608 337 N--GNEQLTNMISTMEQDKIK 355 (391)
T ss_pred c--CHHHHHHHHHHHHHhcCC
Confidence 3 578888999888875443
No 67
>PRK05749 3-deoxy-D-manno-octulosonic-acid transferase; Reviewed
Probab=65.88 E-value=14 Score=39.14 Aligned_cols=107 Identities=16% Similarity=0.117 Sum_probs=62.5
Q ss_pred hhhhcccCCcEEEeeCCC-CCCCchHHHHHhcCceeEEeeCCcccCccCC---CCCCcEEEEEeccccchhh-hHHHHHh
Q 011152 351 NAGQGMASSKFCLNIAGD-TPSSNRLFDAIASHCVPVIISDEIELPFEDV---LDYSEFCITVHSTDAIKKG-FLLNLLR 425 (492)
Q Consensus 351 ~y~~~m~~S~FCL~P~Gd-~~~s~RlfDAi~aGCIPViisd~~~LPF~dv---lDw~~fSV~I~e~dv~~~~-~l~~iL~ 425 (492)
+..+.++.+..|+++... .....-+.|||++|| |||.+++.. -+.++ +.-..+.+.+ .|..... .|..+|.
T Consensus 312 el~~~y~~aDi~~v~~S~~e~~g~~~lEAma~G~-PVI~g~~~~-~~~e~~~~~~~~g~~~~~--~d~~~La~~l~~ll~ 387 (425)
T PRK05749 312 ELGLLYAIADIAFVGGSLVKRGGHNPLEPAAFGV-PVISGPHTF-NFKEIFERLLQAGAAIQV--EDAEDLAKAVTYLLT 387 (425)
T ss_pred HHHHHHHhCCEEEECCCcCCCCCCCHHHHHHhCC-CEEECCCcc-CHHHHHHHHHHCCCeEEE--CCHHHHHHHHHHHhc
Confidence 466778889887775332 113445999999995 888876421 11111 1112344432 3432211 1333333
Q ss_pred CCCHHHHHHHHHHHHHHhhceEecCCCCCCCHHHHHHHHHHhhchh
Q 011152 426 GIKQEQWTKMWERLKEVVQHFEYQYPSQPGDAVDMIWEAVSRKVPS 471 (492)
Q Consensus 426 ~I~~~~i~~Mr~~l~~v~~~f~y~~p~~~~DAf~~il~~l~~Rv~~ 471 (492)
+++...+|.++.++..... .+|.+.+++.+.+-++.
T Consensus 388 --~~~~~~~m~~~a~~~~~~~--------~~~~~~~~~~l~~~l~~ 423 (425)
T PRK05749 388 --DPDARQAYGEAGVAFLKQN--------QGALQRTLQLLEPYLPP 423 (425)
T ss_pred --CHHHHHHHHHHHHHHHHhC--------ccHHHHHHHHHHHhccc
Confidence 5777888888887765442 37888888888765543
No 68
>KOG1387 consensus Glycosyltransferase [Cell wall/membrane/envelope biogenesis]
Probab=64.77 E-value=49 Score=35.11 Aligned_cols=91 Identities=10% Similarity=0.156 Sum_probs=57.9
Q ss_pred chhhhcccCCcEEEeeCCCCCCCchHHHHHhcCceeEEeeCC-----cccCccCCCCCCcEEEEEeccccchhhhHHHHH
Q 011152 350 KNAGQGMASSKFCLNIAGDTPSSNRLFDAIASHCVPVIISDE-----IELPFEDVLDYSEFCITVHSTDAIKKGFLLNLL 424 (492)
Q Consensus 350 ~~y~~~m~~S~FCL~P~Gd~~~s~RlfDAi~aGCIPViisd~-----~~LPF~dvlDw~~fSV~I~e~dv~~~~~l~~iL 424 (492)
++..+.+..+++-+.-.=+....-.+.|+|++|-|||.=..+ +..|++.. -.=+..+++..=...+.+++
T Consensus 348 ~~lv~lL~~a~iGvh~MwNEHFGIsVVEyMAAGlIpi~h~SgGP~lDIV~~~~G~-----~tGFla~t~~EYaE~iLkIv 422 (465)
T KOG1387|consen 348 EKLVELLGKATIGVHTMWNEHFGISVVEYMAAGLIPIVHNSGGPLLDIVTPWDGE-----TTGFLAPTDEEYAEAILKIV 422 (465)
T ss_pred HHHHHHhccceeehhhhhhhhcchhHHHHHhcCceEEEeCCCCCceeeeeccCCc-----cceeecCChHHHHHHHHHHH
Confidence 456788999999998877777788999999999999775542 55564321 11123322211111245555
Q ss_pred hCCCHHHHHHHHHHHHHHhhce
Q 011152 425 RGIKQEQWTKMWERLKEVVQHF 446 (492)
Q Consensus 425 ~~I~~~~i~~Mr~~l~~v~~~f 446 (492)
.- ..++...||++-+.-.-+|
T Consensus 423 ~~-~~~~r~~~r~~AR~s~~RF 443 (465)
T KOG1387|consen 423 KL-NYDERNMMRRNARKSLARF 443 (465)
T ss_pred Hc-CHHHHHHHHHHHHHHHHHh
Confidence 43 5556778888877655554
No 69
>PLN00142 sucrose synthase
Probab=64.25 E-value=33 Score=40.21 Aligned_cols=88 Identities=6% Similarity=0.067 Sum_probs=55.2
Q ss_pred CcEEEeeCCCCCCCchHHHHHhcCceeEEeeCCcccCccCCCCCCcEEEEEeccccchhh-hHHHHHhC--CCHHHHHHH
Q 011152 359 SKFCLNIAGDTPSSNRLFDAIASHCVPVIISDEIELPFEDVLDYSEFCITVHSTDAIKKG-FLLNLLRG--IKQEQWTKM 435 (492)
Q Consensus 359 S~FCL~P~Gd~~~s~RlfDAi~aGCIPViisd~~~LPF~dvlDw~~fSV~I~e~dv~~~~-~l~~iL~~--I~~~~i~~M 435 (492)
+..+++|.=+.+...-+.|||++|+ |||.++.--++ +++.-..-.+.|+..|..... .|.+.|.. -+++.+.+|
T Consensus 667 aDVfVlPS~~EgFGLvvLEAMA~Gl-PVVATdvGG~~--EIV~dG~tG~LV~P~D~eaLA~aI~~lLekLl~Dp~lr~~m 743 (815)
T PLN00142 667 KGAFVQPALYEAFGLTVVEAMTCGL-PTFATCQGGPA--EIIVDGVSGFHIDPYHGDEAANKIADFFEKCKEDPSYWNKI 743 (815)
T ss_pred CCEEEeCCcccCCCHHHHHHHHcCC-CEEEcCCCCHH--HHhcCCCcEEEeCCCCHHHHHHHHHHHHHHhcCCHHHHHHH
Confidence 3455667656666888999999996 77777643222 334334556677766654311 13333332 267888888
Q ss_pred HHHHH-HHhhceEec
Q 011152 436 WERLK-EVVQHFEYQ 449 (492)
Q Consensus 436 r~~l~-~v~~~f~y~ 449 (492)
.++.+ ++..+|.|.
T Consensus 744 g~~Ar~rv~e~FSWe 758 (815)
T PLN00142 744 SDAGLQRIYECYTWK 758 (815)
T ss_pred HHHHHHHHHHhCCHH
Confidence 88865 466788774
No 70
>PLN02939 transferase, transferring glycosyl groups
Probab=63.20 E-value=26 Score=41.64 Aligned_cols=92 Identities=17% Similarity=0.192 Sum_probs=56.8
Q ss_pred hcccCCcEEEeeCCCCCCCchHHHHHhcCceeEEeeCCcccCccCCCCCC--------cEEEEEeccccchhh-hHHHHH
Q 011152 354 QGMASSKFCLNIAGDTPSSNRLFDAIASHCVPVIISDEIELPFEDVLDYS--------EFCITVHSTDAIKKG-FLLNLL 424 (492)
Q Consensus 354 ~~m~~S~FCL~P~Gd~~~s~RlfDAi~aGCIPViisd~~~LPF~dvlDw~--------~fSV~I~e~dv~~~~-~l~~iL 424 (492)
..++.+.+++.|.=..+..--..|||.+||+||+...+- ++ +-+.|++ .-.+.++..|..... .|...|
T Consensus 852 ~IYAaADIFLmPSr~EPfGLvqLEAMAyGtPPVVs~vGG-L~-DtV~d~d~e~i~~eg~NGfLf~~~D~eaLa~AL~rAL 929 (977)
T PLN02939 852 SIYAASDMFIIPSMFEPCGLTQMIAMRYGSVPIVRKTGG-LN-DSVFDFDDETIPVELRNGFTFLTPDEQGLNSALERAF 929 (977)
T ss_pred HHHHhCCEEEECCCccCCcHHHHHHHHCCCCEEEecCCC-Cc-ceeecCCccccccCCCceEEecCCCHHHHHHHHHHHH
Confidence 578999999999877888889999999999998764321 11 2223332 224445555543311 133333
Q ss_pred hCC--CHHHHHHHHHHHHHHhhceEec
Q 011152 425 RGI--KQEQWTKMWERLKEVVQHFEYQ 449 (492)
Q Consensus 425 ~~I--~~~~i~~Mr~~l~~v~~~f~y~ 449 (492)
..+ .++.+.+|+++. +...|.|.
T Consensus 930 ~~~~~dpe~~~~L~~~a--m~~dFSWe 954 (977)
T PLN02939 930 NYYKRKPEVWKQLVQKD--MNIDFSWD 954 (977)
T ss_pred HHhccCHHHHHHHHHHH--HHhcCCHH
Confidence 322 577888888754 34556664
No 71
>TIGR01133 murG undecaprenyldiphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase. RL J Bacteriol 1993 Mar;175(6):1841-3
Probab=62.93 E-value=11 Score=38.08 Aligned_cols=84 Identities=19% Similarity=0.198 Sum_probs=49.2
Q ss_pred hhhhcccCCcEEEeeCCCCCCCchHHHHHhcCceeEEeeCCcccCcc-----CCCCCCcEEEEEeccc--cchhh-hHHH
Q 011152 351 NAGQGMASSKFCLNIAGDTPSSNRLFDAIASHCVPVIISDEIELPFE-----DVLDYSEFCITVHSTD--AIKKG-FLLN 422 (492)
Q Consensus 351 ~y~~~m~~S~FCL~P~Gd~~~s~RlfDAi~aGCIPViisd~~~LPF~-----dvlDw~~fSV~I~e~d--v~~~~-~l~~ 422 (492)
++.+.|..+..++.+.| ...++|||++| +|||..+.-.-+-+ +.+.-....+.++..| ..... .|.+
T Consensus 243 ~~~~~l~~ad~~v~~~g----~~~l~Ea~~~g-~Pvv~~~~~~~~~~~~~~~~~i~~~~~G~~~~~~~~~~~~l~~~i~~ 317 (348)
T TIGR01133 243 NMAAAYAAADLVISRAG----ASTVAELAAAG-VPAILIPYPYAADDQYYNAKFLEDLGAGLVIRQKELLPEKLLEALLK 317 (348)
T ss_pred CHHHHHHhCCEEEECCC----hhHHHHHHHcC-CCEEEeeCCCCccchhhHHHHHHHCCCEEEEecccCCHHHHHHHHHH
Confidence 56788999999998766 24699999999 57777532000000 1222344555666554 32211 1334
Q ss_pred HHhCCCHHHHHHHHHHHHH
Q 011152 423 LLRGIKQEQWTKMWERLKE 441 (492)
Q Consensus 423 iL~~I~~~~i~~Mr~~l~~ 441 (492)
.|. +++...+|.++.++
T Consensus 318 ll~--~~~~~~~~~~~~~~ 334 (348)
T TIGR01133 318 LLL--DPANLEAMAEAARK 334 (348)
T ss_pred HHc--CHHHHHHHHHHHHh
Confidence 443 56777778777654
No 72
>TIGR02918 accessory Sec system glycosylation protein GtfA. Members of this protein family are found only in Gram-positive bacteria of the Firmicutes lineage, including several species of Staphylococcus, Streptococcus, and Lactobacillus. Members are associated with glycosylation of serine-rich glycoproteins exported by the accessory Sec system.
Probab=62.03 E-value=84 Score=34.63 Aligned_cols=92 Identities=12% Similarity=0.095 Sum_probs=54.1
Q ss_pred hhhhcccCCcEEEeeCCCCCCCchHHHHHhcCceeEEeeCC-cccCccCCCCCCcEEEEEec----cc----cchhh-hH
Q 011152 351 NAGQGMASSKFCLNIAGDTPSSNRLFDAIASHCVPVIISDE-IELPFEDVLDYSEFCITVHS----TD----AIKKG-FL 420 (492)
Q Consensus 351 ~y~~~m~~S~FCL~P~Gd~~~s~RlfDAi~aGCIPViisd~-~~LPF~dvlDw~~fSV~I~e----~d----v~~~~-~l 420 (492)
+..+.+..+.-++.|.=.......+.|||++|| |||..|- +-.| ++|.=..-.+.++. .| +.... .|
T Consensus 385 ~~~~~~~~adv~v~pS~~Egfgl~~lEAma~G~-PVI~~dv~~G~~--eiI~~g~nG~lv~~~~~~~d~~~~~~~la~~I 461 (500)
T TIGR02918 385 NLSEVYKDYELYLSASTSEGFGLTLMEAVGSGL-GMIGFDVNYGNP--TFIEDNKNGYLIPIDEEEDDEDQIITALAEKI 461 (500)
T ss_pred CHHHHHHhCCEEEEcCccccccHHHHHHHHhCC-CEEEecCCCCCH--HHccCCCCEEEEeCCccccchhHHHHHHHHHH
Confidence 345667777777777644445788999999996 6777662 2222 33333333444441 12 21111 13
Q ss_pred HHHHhCCCHHHHHHHHHHHHHHhhceEe
Q 011152 421 LNLLRGIKQEQWTKMWERLKEVVQHFEY 448 (492)
Q Consensus 421 ~~iL~~I~~~~i~~Mr~~l~~v~~~f~y 448 (492)
..+| .+++..+|.++..+..+.|.+
T Consensus 462 ~~ll---~~~~~~~~~~~a~~~a~~fs~ 486 (500)
T TIGR02918 462 VEYF---NSNDIDAFHEYSYQIAEGFLT 486 (500)
T ss_pred HHHh---ChHHHHHHHHHHHHHHHhcCH
Confidence 3434 466789999999988877655
No 73
>COG4128 Zot Zonula occludens toxin [General function prediction only]
Probab=57.11 E-value=9.3 Score=39.47 Aligned_cols=31 Identities=16% Similarity=0.188 Sum_probs=23.0
Q ss_pred CCCCCcccchhHHHHHHHHHHHHHHHHhhhh
Q 011152 2 SEKGILPSRFLFCLITISMFLLIISSSFLLQ 32 (492)
Q Consensus 2 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 32 (492)
+-+++--++-+.+|+.+..+.|+.|||.+..
T Consensus 216 ag~slw~s~Kv~fll~l~~lmf~~s~y~~~~ 246 (398)
T COG4128 216 AGQSLWNSGKVRFLLVLFPLMFIGSSYLIYS 246 (398)
T ss_pred hhhhhhcCCceEEeHHHHHHHHHhhhhhhcc
Confidence 3445555566677888889999999998654
No 74
>PRK00726 murG undecaprenyldiphospho-muramoylpentapeptide beta-N- acetylglucosaminyltransferase; Provisional
Probab=57.00 E-value=19 Score=36.76 Aligned_cols=101 Identities=15% Similarity=0.182 Sum_probs=56.7
Q ss_pred hhhhcccCCcEEEeeCCCCCCCchHHHHHhcCceeEEeeCC-c------ccCccCCCCCCcEEEEEeccccchhhhHHHH
Q 011152 351 NAGQGMASSKFCLNIAGDTPSSNRLFDAIASHCVPVIISDE-I------ELPFEDVLDYSEFCITVHSTDAIKKGFLLNL 423 (492)
Q Consensus 351 ~y~~~m~~S~FCL~P~Gd~~~s~RlfDAi~aGCIPViisd~-~------~LPF~dvlDw~~fSV~I~e~dv~~~~~l~~i 423 (492)
++.+.|..+..+++..| ..-++|||.+|+ |||..+. . ....+.+.+ ....+.++.+|+. ...|.+.
T Consensus 245 ~~~~~~~~~d~~i~~~g----~~~~~Ea~~~g~-Pvv~~~~~~~~~~~~~~~~~~i~~-~~~g~~~~~~~~~-~~~l~~~ 317 (357)
T PRK00726 245 DMAAAYAAADLVICRAG----ASTVAELAAAGL-PAILVPLPHAADDHQTANARALVD-AGAALLIPQSDLT-PEKLAEK 317 (357)
T ss_pred hHHHHHHhCCEEEECCC----HHHHHHHHHhCC-CEEEecCCCCCcCcHHHHHHHHHH-CCCEEEEEcccCC-HHHHHHH
Confidence 56788889999998766 245999999996 5554321 1 011122333 3456777766631 1223333
Q ss_pred HhCC--CHHHHHHHHHHHHHHhhceEecCCCCCCCHHHHHHHHHHhh
Q 011152 424 LRGI--KQEQWTKMWERLKEVVQHFEYQYPSQPGDAVDMIWEAVSRK 468 (492)
Q Consensus 424 L~~I--~~~~i~~Mr~~l~~v~~~f~y~~p~~~~DAf~~il~~l~~R 468 (492)
++.+ .++...+|+++.++.. ..++.+.+.+.+...
T Consensus 318 i~~ll~~~~~~~~~~~~~~~~~----------~~~~~~~~~~~~~~~ 354 (357)
T PRK00726 318 LLELLSDPERLEAMAEAARALG----------KPDAAERLADLIEEL 354 (357)
T ss_pred HHHHHcCHHHHHHHHHHHHhcC----------CcCHHHHHHHHHHHH
Confidence 3222 3666777888755432 235555555555443
No 75
>cd03788 GT1_TPS Trehalose-6-Phosphate Synthase (TPS) is a glycosyltransferase that catalyses the synthesis of alpha,alpha-1,1-trehalose-6-phosphate from glucose-6-phosphate using a UDP-glucose donor. It is a key enzyme in the trehalose synthesis pathway. Trehalose is a nonreducing disaccharide present in a wide variety of organisms and may serve as a source of energy and carbon. It is characterized most notably in insect, plant, and microbial cells. Its production is often associated with a variety of stress conditions, including desiccation, dehydration, heat, cold, and oxidation. This family represents the catalytic domain of the TPS. Some members of this domain family coexist with a C-terminal trehalose phosphatase domain.
Probab=50.34 E-value=23 Score=38.46 Aligned_cols=91 Identities=13% Similarity=0.019 Sum_probs=57.9
Q ss_pred cchhhhcccCCcEEEeeCCCCCCCchHHHHHhcCce---eEEeeCCcccCccCCCCCCcEEEEEeccccchhhh-HHHHH
Q 011152 349 VKNAGQGMASSKFCLNIAGDTPSSNRLFDAIASHCV---PVIISDEIELPFEDVLDYSEFCITVHSTDAIKKGF-LLNLL 424 (492)
Q Consensus 349 ~~~y~~~m~~S~FCL~P~Gd~~~s~RlfDAi~aGCI---PViisd~~~LPF~dvlDw~~fSV~I~e~dv~~~~~-l~~iL 424 (492)
.++..+.++.+.-++.|.-......-+.|||++||= |||+++..-.+-+ ..-.+.|+..|+..... |.+.|
T Consensus 351 ~~el~~~y~~aDv~v~pS~~Eg~~lv~lEAma~g~p~~g~vV~S~~~G~~~~-----~~~g~lv~p~d~~~la~ai~~~l 425 (460)
T cd03788 351 REELAALYRAADVALVTPLRDGMNLVAKEYVACQDDDPGVLILSEFAGAAEE-----LSGALLVNPYDIDEVADAIHRAL 425 (460)
T ss_pred HHHHHHHHHhccEEEeCccccccCcccceeEEEecCCCceEEEeccccchhh-----cCCCEEECCCCHHHHHHHHHHHH
Confidence 356777888888888876544446678999999996 6999875322211 12356677666554222 33333
Q ss_pred hCCCHHHHHHHHHHHHHHhhc
Q 011152 425 RGIKQEQWTKMWERLKEVVQH 445 (492)
Q Consensus 425 ~~I~~~~i~~Mr~~l~~v~~~ 445 (492)
..++++..+|.++.++....
T Consensus 426 -~~~~~e~~~~~~~~~~~v~~ 445 (460)
T cd03788 426 -TMPLEERRERHRKLREYVRT 445 (460)
T ss_pred -cCCHHHHHHHHHHHHHHHHh
Confidence 34777777777777766554
No 76
>TIGR02470 sucr_synth sucrose synthase. This model represents sucrose synthase, an enzyme that, despite its name, generally uses rather produces sucrose. Sucrose plus UDP (or ADP) becomes D-fructose plus UDP-glucose (or ADP-glucose), which is then available for cell wall (or starch) biosynthesis. The enzyme is homologous to sucrose phosphate synthase, which catalyzes the penultimate step in sucrose synthesis. Sucrose synthase is found, so far, exclusively in plants and cyanobacteria.
Probab=47.92 E-value=1e+02 Score=36.19 Aligned_cols=88 Identities=6% Similarity=0.097 Sum_probs=56.2
Q ss_pred CcEEEeeCCCCCCCchHHHHHhcCceeEEeeCCcccCccCCCCCCcEEEEEeccccchhh-hHHHHHhC--CCHHHHHHH
Q 011152 359 SKFCLNIAGDTPSSNRLFDAIASHCVPVIISDEIELPFEDVLDYSEFCITVHSTDAIKKG-FLLNLLRG--IKQEQWTKM 435 (492)
Q Consensus 359 S~FCL~P~Gd~~~s~RlfDAi~aGCIPViisd~~~LPF~dvlDw~~fSV~I~e~dv~~~~-~l~~iL~~--I~~~~i~~M 435 (492)
+..+++|.=..+...-+.|||++|| |||.++.=-++ +++.-..-.+.|+..|..... .|..++.. -.++.+.+|
T Consensus 644 adVfV~PS~~EpFGLvvLEAMAcGl-PVVAT~~GG~~--EiV~dg~tGfLVdp~D~eaLA~aL~~ll~kll~dp~~~~~m 720 (784)
T TIGR02470 644 KGIFVQPALYEAFGLTVLEAMTCGL-PTFATRFGGPL--EIIQDGVSGFHIDPYHGEEAAEKIVDFFEKCDEDPSYWQKI 720 (784)
T ss_pred CcEEEECCcccCCCHHHHHHHHcCC-CEEEcCCCCHH--HHhcCCCcEEEeCCCCHHHHHHHHHHHHHHhcCCHHHHHHH
Confidence 3466778777777899999999997 55656532222 233334556677777754422 13344422 267888899
Q ss_pred HHHHH-HHhhceEec
Q 011152 436 WERLK-EVVQHFEYQ 449 (492)
Q Consensus 436 r~~l~-~v~~~f~y~ 449 (492)
.++.+ ++..+|.|.
T Consensus 721 s~~a~~rV~~~FSW~ 735 (784)
T TIGR02470 721 SQGGLQRIYEKYTWK 735 (784)
T ss_pred HHHHHHHHHHhCCHH
Confidence 88865 467888885
No 77
>cd04950 GT1_like_1 Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homology. The large cleft that separates the two domains includes the catalytic center
Probab=46.50 E-value=22 Score=37.04 Aligned_cols=40 Identities=20% Similarity=0.181 Sum_probs=29.4
Q ss_pred chhhhcccCCcEEEeeCCCC-----CCCchHHHHHhcCceeEEeeC
Q 011152 350 KNAGQGMASSKFCLNIAGDT-----PSSNRLFDAIASHCVPVIISD 390 (492)
Q Consensus 350 ~~y~~~m~~S~FCL~P~Gd~-----~~s~RlfDAi~aGCIPViisd 390 (492)
++..+.++.+..|+.|--.. .....++|+|++|+ |||..+
T Consensus 265 ~~l~~~l~~~Dv~l~P~~~~~~~~~~~P~Kl~EylA~G~-PVVat~ 309 (373)
T cd04950 265 KELPAYLAGFDVAILPFRLNELTRATSPLKLFEYLAAGK-PVVATP 309 (373)
T ss_pred HHHHHHHHhCCEEecCCccchhhhcCCcchHHHHhccCC-CEEecC
Confidence 35667799999999996432 22457999999995 787654
No 78
>TIGR02400 trehalose_OtsA alpha,alpha-trehalose-phosphate synthase [UDP-forming]. This enzyme catalyzes the key, penultimate step in biosynthesis of trehalose, a compatible solute made as an osmoprotectant in some species in all three domains of life. The gene symbol OtsA stands for osmotically regulated trehalose synthesis A. Trehalose helps protect against both osmotic and thermal stresses, and is made from two glucose subunits. This model excludes glucosylglycerol-phosphate synthase, an enzyme of an analogous osmoprotectant system in many cyanobacterial strains. This model does not identify archaeal examples, as they are more divergent than glucosylglycerol-phosphate synthase. Sequences that score in the gray zone between the trusted and noise cutoffs include a number of yeast multidomain proteins in which the N-terminal domain may be functionally equivalent to this family. The gray zone also includes the OtsA of Cornyebacterium glutamicum (and related species), shown to be responsib
Probab=46.31 E-value=56 Score=35.58 Aligned_cols=90 Identities=11% Similarity=0.018 Sum_probs=56.6
Q ss_pred cchhhhcccCCcEEEeeCCCCCCCchHHHHHhcCcee----EEeeCCcccCccCCCCCCcEEEEEeccccchhhh-HHHH
Q 011152 349 VKNAGQGMASSKFCLNIAGDTPSSNRLFDAIASHCVP----VIISDEIELPFEDVLDYSEFCITVHSTDAIKKGF-LLNL 423 (492)
Q Consensus 349 ~~~y~~~m~~S~FCL~P~Gd~~~s~RlfDAi~aGCIP----Viisd~~~LPF~dvlDw~~fSV~I~e~dv~~~~~-l~~i 423 (492)
.++..+.++.+.-|+.|.=.....--..|||++|+ | ||+++..-.+- .+. -++.|+..|...... |.+.
T Consensus 346 ~~el~aly~aaDv~vv~S~~EG~~Lv~lEamA~g~-P~~g~vVlS~~~G~~~--~l~---~gllVnP~d~~~lA~aI~~a 419 (456)
T TIGR02400 346 REELMALYRAADVGLVTPLRDGMNLVAKEYVAAQD-PKDGVLILSEFAGAAQ--ELN---GALLVNPYDIDGMADAIARA 419 (456)
T ss_pred HHHHHHHHHhCcEEEECccccccCccHHHHHHhcC-CCCceEEEeCCCCChH--HhC---CcEEECCCCHHHHHHHHHHH
Confidence 45678889999999987643334677999999996 8 89987532221 122 256777777654222 3344
Q ss_pred HhCCCHHHHHHHHHHHHHHhhc
Q 011152 424 LRGIKQEQWTKMWERLKEVVQH 445 (492)
Q Consensus 424 L~~I~~~~i~~Mr~~l~~v~~~ 445 (492)
|. .++++..++.+++++...+
T Consensus 420 L~-~~~~er~~r~~~~~~~v~~ 440 (456)
T TIGR02400 420 LT-MPLEEREERHRAMMDKLRK 440 (456)
T ss_pred Hc-CCHHHHHHHHHHHHHHHhh
Confidence 43 4666666666666554333
No 79
>PF07172 GRP: Glycine rich protein family; InterPro: IPR010800 This family consists of glycine rich proteins. Some of them may be involved in resistance to environmental stress [].
Probab=46.28 E-value=17 Score=31.19 Aligned_cols=19 Identities=32% Similarity=0.459 Sum_probs=10.0
Q ss_pred ccchhHHHHHHHHHHHHHH
Q 011152 8 PSRFLFCLITISMFLLIIS 26 (492)
Q Consensus 8 ~~~~~~~~~~~~~~~~~~~ 26 (492)
|+.+||....++++|+|.|
T Consensus 3 SK~~llL~l~LA~lLlisS 21 (95)
T PF07172_consen 3 SKAFLLLGLLLAALLLISS 21 (95)
T ss_pred hhHHHHHHHHHHHHHHHHh
Confidence 4455555555555555544
No 80
>cd01635 Glycosyltransferase_GTB_type Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. The structures of the formed glycoconjugates are extremely diverse, reflecting a wide range of biological functions. The members of this family share a common GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homology. The large cleft that separates the two domains includes the catalytic center and permits a high degree of flexibility.
Probab=45.65 E-value=22 Score=32.44 Aligned_cols=40 Identities=18% Similarity=0.090 Sum_probs=30.9
Q ss_pred hhhhcccCCcEEEeeCCCCCCCchHHHHHhcCceeEEeeCC
Q 011152 351 NAGQGMASSKFCLNIAGDTPSSNRLFDAIASHCVPVIISDE 391 (492)
Q Consensus 351 ~y~~~m~~S~FCL~P~Gd~~~s~RlfDAi~aGCIPViisd~ 391 (492)
.+...++.|..+++|......+..++|||.+|| |||.++.
T Consensus 174 ~~~~~~~~~di~l~~~~~e~~~~~~~Eam~~g~-pvi~s~~ 213 (229)
T cd01635 174 LLALLLAAADVFVLPSLREGFGLVVLEAMACGL-PVIATDV 213 (229)
T ss_pred HHHHHhhcCCEEEecccccCcChHHHHHHhCCC-CEEEcCC
Confidence 344555569999999987778899999999986 4555553
No 81
>PLN02316 synthase/transferase
Probab=45.17 E-value=50 Score=39.77 Aligned_cols=37 Identities=19% Similarity=0.151 Sum_probs=32.7
Q ss_pred hcccCCcEEEeeCCCCCCCchHHHHHhcCceeEEeeC
Q 011152 354 QGMASSKFCLNIAGDTPSSNRLFDAIASHCVPVIISD 390 (492)
Q Consensus 354 ~~m~~S~FCL~P~Gd~~~s~RlfDAi~aGCIPViisd 390 (492)
..++.+.+.+.|.=..+......|||.+||+||+-..
T Consensus 915 ~iyaaADiflmPS~~EP~GLvqLEAMa~GtppVvs~v 951 (1036)
T PLN02316 915 LIYAGADFILVPSIFEPCGLTQLTAMRYGSIPVVRKT 951 (1036)
T ss_pred HHHHhCcEEEeCCcccCccHHHHHHHHcCCCeEEEcC
Confidence 5789999999998888889999999999999999543
No 82
>PLN02605 monogalactosyldiacylglycerol synthase
Probab=42.30 E-value=1.2e+02 Score=31.74 Aligned_cols=80 Identities=19% Similarity=0.280 Sum_probs=47.0
Q ss_pred hhhhcccCCcEEEeeCCCCCCCchHHHHHhcCceeEEeeCCcccCccC------CCCCCcEEEEEeccccchhh-hHHHH
Q 011152 351 NAGQGMASSKFCLNIAGDTPSSNRLFDAIASHCVPVIISDEIELPFED------VLDYSEFCITVHSTDAIKKG-FLLNL 423 (492)
Q Consensus 351 ~y~~~m~~S~FCL~P~Gd~~~s~RlfDAi~aGCIPViisd~~~LPF~d------vlDw~~fSV~I~e~dv~~~~-~l~~i 423 (492)
+..+.|..|...+.++|- ..+.|||++|+ |||+.+.. |-++ +++ ....+.+ .|..... .|.++
T Consensus 275 ~~~~l~~aaDv~V~~~g~----~ti~EAma~g~-PvI~~~~~--pgqe~gn~~~i~~-~g~g~~~--~~~~~la~~i~~l 344 (382)
T PLN02605 275 NMEEWMGACDCIITKAGP----GTIAEALIRGL-PIILNGYI--PGQEEGNVPYVVD-NGFGAFS--ESPKEIARIVAEW 344 (382)
T ss_pred cHHHHHHhCCEEEECCCc----chHHHHHHcCC-CEEEecCC--CccchhhHHHHHh-CCceeec--CCHHHHHHHHHHH
Confidence 467788999988887762 24899999995 77777632 3322 122 3445544 2322211 13333
Q ss_pred HhCCCHHHHHHHHHHHHH
Q 011152 424 LRGIKQEQWTKMWERLKE 441 (492)
Q Consensus 424 L~~I~~~~i~~Mr~~l~~ 441 (492)
|.. .++...+|+++.++
T Consensus 345 l~~-~~~~~~~m~~~~~~ 361 (382)
T PLN02605 345 FGD-KSDELEAMSENALK 361 (382)
T ss_pred HcC-CHHHHHHHHHHHHH
Confidence 332 36777888877665
No 83
>TIGR03590 PseG pseudaminic acid biosynthesis-associated protein PseG. This protein is found in association with enzymes involved in the biosynthesis of pseudaminic acid, a component of polysaccharide in certain Pseudomonas strains as well as a modification of flagellin in Campylobacter and Hellicobacter. The role of this protein is unclear, although it may participate in N-acetylation in conjunction with, or in the absence of PseH (TIGR03585) as it often scores above the trusted cutoff to pfam00583 representing a family of acetyltransferases.
Probab=42.00 E-value=61 Score=32.61 Aligned_cols=34 Identities=15% Similarity=0.307 Sum_probs=27.7
Q ss_pred chhhhcccCCcEEEeeCCCCCCCchHHHHHhcCceeEEee
Q 011152 350 KNAGQGMASSKFCLNIAGDTPSSNRLFDAIASHCVPVIIS 389 (492)
Q Consensus 350 ~~y~~~m~~S~FCL~P~Gd~~~s~RlfDAi~aGCIPViis 389 (492)
.+..+.|..+...++..| + .++|++.+| +|+|+-
T Consensus 233 ~~m~~lm~~aDl~Is~~G-~----T~~E~~a~g-~P~i~i 266 (279)
T TIGR03590 233 ENMAELMNEADLAIGAAG-S----TSWERCCLG-LPSLAI 266 (279)
T ss_pred HHHHHHHHHCCEEEECCc-h----HHHHHHHcC-CCEEEE
Confidence 356788999999999877 2 299999999 787764
No 84
>COG0438 RfaG Glycosyltransferase [Cell envelope biogenesis, outer membrane]
Probab=38.23 E-value=78 Score=30.01 Aligned_cols=42 Identities=24% Similarity=0.174 Sum_probs=30.1
Q ss_pred chhhhcccCCcEEEeeCCCCCCCchHHHHHhcCceeEEeeCCc
Q 011152 350 KNAGQGMASSKFCLNIAGDTPSSNRLFDAIASHCVPVIISDEI 392 (492)
Q Consensus 350 ~~y~~~m~~S~FCL~P~Gd~~~s~RlfDAi~aGCIPViisd~~ 392 (492)
.+..+.++.+...+.|.-.......+.||+.+| +|||.++.-
T Consensus 268 ~~~~~~~~~~~~~v~ps~~e~~~~~~~Ea~a~g-~pvi~~~~~ 309 (381)
T COG0438 268 EELAELLASADVFVLPSLSEGFGLVLLEAMAAG-TPVIASDVG 309 (381)
T ss_pred HHHHHHHHhCCEEEeccccccchHHHHHHHhcC-CcEEECCCC
Confidence 345556777889999853322234499999999 999888653
No 85
>smart00672 CAP10 Putative lipopolysaccharide-modifying enzyme.
Probab=37.29 E-value=3.4e+02 Score=27.23 Aligned_cols=136 Identities=18% Similarity=0.197 Sum_probs=79.4
Q ss_pred CCCCCCeEEEEeeccccCCCchhhHHHHHHhhcCCC-e--EEEeCc--ccCC----C--cc-hhhhcccCCcEEEeeCCC
Q 011152 301 PFDQRPTLAYFQGAIYRKDGGVIRQELYYLLKDEKD-V--HFTFGS--IQGD----G--VK-NAGQGMASSKFCLNIAGD 368 (492)
Q Consensus 301 ~~~~R~~L~~FaG~~~~~~~~~iR~~L~~~~~~~~~-~--~~~~g~--~~~~----~--~~-~y~~~m~~S~FCL~P~Gd 368 (492)
+-..|.-.++|+|+.. ++..|+.|++...+.++ + .+.... ..|. . .+ --.+...+-||=+..-|.
T Consensus 79 pW~~K~~~a~WRG~~~---~~~~R~~Lv~~~~~~p~~~da~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~yKyli~~dG~ 155 (256)
T smart00672 79 KWSDKNAYAYWRGNPT---VASERLDLIKCNQSSPELVNARITIQDWPGKCDGEEDAPGFKKSPLEEQCKHKYKINIEGV 155 (256)
T ss_pred CccccCcCccccCCCC---CCcchHHHHHHhcCCcccceeEEEEecCCCCChHHhcccCcCCCCHHHHhhcceEEecCCc
Confidence 4456778899999873 22389999988776654 2 221100 0011 0 00 113445678999999999
Q ss_pred CCCCchHHHHHhcCceeEEeeCCcccCcc-CCCCCCcEEEEEec--cc--cchhhhHHHHHhCCCHHHHHHHHHHHHHHh
Q 011152 369 TPSSNRLFDAIASHCVPVIISDEIELPFE-DVLDYSEFCITVHS--TD--AIKKGFLLNLLRGIKQEQWTKMWERLKEVV 443 (492)
Q Consensus 369 ~~~s~RlfDAi~aGCIPViisd~~~LPF~-dvlDw~~fSV~I~e--~d--v~~~~~l~~iL~~I~~~~i~~Mr~~l~~v~ 443 (492)
++ |-|+.=-|.+++|++.....+.-=|. .+..|.-|. -|.. +| +.+ .++.+++ .+++.+++-++..+..
T Consensus 156 ~~-S~rl~~~l~~~Svvl~~~~~~~~~~~~~L~P~~HYv-Pv~~d~sd~~l~~---~i~~~~~-~~~~a~~Ia~~~~~~~ 229 (256)
T smart00672 156 AW-SVRLKYILACDSVVLKVKPEYYEFFSRGLQPWVHYW-PIKSDLSCRELKE---AVDWGNE-HDKKAQEIGKRGSEFI 229 (256)
T ss_pred cc-hhhHHHHHhcCceEEEeCCchhHHHHhcccCccceE-EeeCCCchhhHHH---HHHHHHh-CHHHHHHHHHHHHHHH
Confidence 86 78999999999998887754321122 234555552 2221 12 332 4444444 4556666666777655
Q ss_pred hc
Q 011152 444 QH 445 (492)
Q Consensus 444 ~~ 445 (492)
+.
T Consensus 230 ~~ 231 (256)
T smart00672 230 QQ 231 (256)
T ss_pred HH
Confidence 55
No 86
>PHA02291 hypothetical protein
Probab=35.22 E-value=58 Score=28.57 Aligned_cols=25 Identities=16% Similarity=0.362 Sum_probs=20.1
Q ss_pred ccchhHHHHHHHHHHHHHHHHhhhh
Q 011152 8 PSRFLFCLITISMFLLIISSSFLLQ 32 (492)
Q Consensus 8 ~~~~~~~~~~~~~~~~~~~~~~~~~ 32 (492)
+.++||++..++.++|.+|.+..-.
T Consensus 3 ~K~~iFYiL~~~VL~~si~sY~~sS 27 (132)
T PHA02291 3 RKASIFYILVVIVLAFSISSYYISS 27 (132)
T ss_pred cchhhHHHHHHHHHHHHHHHHhhhe
Confidence 5678999999999999888887643
No 87
>PRK10125 putative glycosyl transferase; Provisional
Probab=33.32 E-value=1.3e+02 Score=32.01 Aligned_cols=63 Identities=17% Similarity=0.115 Sum_probs=44.1
Q ss_pred chhhhcccCCcEEEeeCCCCCCCchHHHHHhcCceeEEeeCCcccCccCCCCCCcEEEEEeccccch
Q 011152 350 KNAGQGMASSKFCLNIAGDTPSSNRLFDAIASHCVPVIISDEIELPFEDVLDYSEFCITVHSTDAIK 416 (492)
Q Consensus 350 ~~y~~~m~~S~FCL~P~Gd~~~s~RlfDAi~aGCIPViisd~~~LPF~dvlDw~~fSV~I~e~dv~~ 416 (492)
.+..+.|+.+...+.|.-......-+.|||++| +|||..|---.| ++++-. -.+.++..|+..
T Consensus 298 ~~l~~~y~~aDvfV~pS~~Egfp~vilEAmA~G-~PVVat~~gG~~--Eiv~~~-~G~lv~~~d~~~ 360 (405)
T PRK10125 298 RKLMSALNQMDALVFSSRVDNYPLILCEALSIG-VPVIATHSDAAR--EVLQKS-GGKTVSEEEVLQ 360 (405)
T ss_pred HHHHHHHHhCCEEEECCccccCcCHHHHHHHcC-CCEEEeCCCChH--HhEeCC-cEEEECCCCHHH
Confidence 345677888888778876666688899999999 588888754333 345433 467788777644
No 88
>cd03785 GT1_MurG MurG is an N-acetylglucosaminyltransferase, the last enzyme involved in the intracellular phase of peptidoglycan biosynthesis. It transfers N-acetyl-D-glucosamine (GlcNAc) from UDP-GlcNAc to the C4 hydroxyl of a lipid-linked N-acetylmuramoyl pentapeptide (NAM). The resulting disaccharide is then transported across the cell membrane, where it is polymerized into NAG-NAM cell-wall repeat structure. MurG belongs to the GT-B structural superfamily of glycoslytransferases, which have characteristic N- and C-terminal domains, each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homology. The large cleft that separates the two domains includes the catalytic center and permits a high degree of flexibility.
Probab=31.69 E-value=64 Score=32.56 Aligned_cols=84 Identities=15% Similarity=0.204 Sum_probs=48.1
Q ss_pred chhhhcccCCcEEEeeCCCCCCCchHHHHHhcCceeEEeeCCc-------ccCccCCCCCCcEEEEEecc--ccchhh-h
Q 011152 350 KNAGQGMASSKFCLNIAGDTPSSNRLFDAIASHCVPVIISDEI-------ELPFEDVLDYSEFCITVHST--DAIKKG-F 419 (492)
Q Consensus 350 ~~y~~~m~~S~FCL~P~Gd~~~s~RlfDAi~aGCIPViisd~~-------~LPF~dvlDw~~fSV~I~e~--dv~~~~-~ 419 (492)
.++.+.|..+.+.+++.| ..-+.|||.+|+ |||..+.- ..+.+.+.+ ....+.++.. |..... .
T Consensus 244 ~~~~~~l~~ad~~v~~sg----~~t~~Eam~~G~-Pvv~~~~~~~~~~~~~~~~~~l~~-~g~g~~v~~~~~~~~~l~~~ 317 (350)
T cd03785 244 DDMAAAYAAADLVISRAG----ASTVAELAALGL-PAILIPLPYAADDHQTANARALVK-AGAAVLIPQEELTPERLAAA 317 (350)
T ss_pred hhHHHHHHhcCEEEECCC----HhHHHHHHHhCC-CEEEeecCCCCCCcHHHhHHHHHh-CCCEEEEecCCCCHHHHHHH
Confidence 356678889999888766 235899999996 56654321 112222333 3455666644 332211 1
Q ss_pred HHHHHhCCCHHHHHHHHHHHHH
Q 011152 420 LLNLLRGIKQEQWTKMWERLKE 441 (492)
Q Consensus 420 l~~iL~~I~~~~i~~Mr~~l~~ 441 (492)
|.++|. +++...+|+++.++
T Consensus 318 i~~ll~--~~~~~~~~~~~~~~ 337 (350)
T cd03785 318 LLELLS--DPERLKAMAEAARS 337 (350)
T ss_pred HHHHhc--CHHHHHHHHHHHHh
Confidence 333343 56777778877654
No 89
>PRK15179 Vi polysaccharide biosynthesis protein TviE; Provisional
Probab=28.65 E-value=2.4e+02 Score=32.57 Aligned_cols=93 Identities=13% Similarity=0.046 Sum_probs=52.4
Q ss_pred hhhhcccCCcEEEeeCCCCCCCchHHHHHhcCceeEEeeCCcccCccCCCCCCcEEEEEeccccc--hh-hhHHHHHhCC
Q 011152 351 NAGQGMASSKFCLNIAGDTPSSNRLFDAIASHCVPVIISDEIELPFEDVLDYSEFCITVHSTDAI--KK-GFLLNLLRGI 427 (492)
Q Consensus 351 ~y~~~m~~S~FCL~P~Gd~~~s~RlfDAi~aGCIPViisd~~~LPF~dvlDw~~fSV~I~e~dv~--~~-~~l~~iL~~I 427 (492)
+....|..+...+.|.-.......+.|||.+| +|||.++.--.| +++.-..-.+.++..|.. .. ..|.++|...
T Consensus 584 dv~~ll~aaDv~VlpS~~Egfp~vlLEAMA~G-~PVVat~~gG~~--EiV~dg~~GlLv~~~d~~~~~La~aL~~ll~~l 660 (694)
T PRK15179 584 RVGYWLTQFNAFLLLSRFEGLPNVLIEAQFSG-VPVVTTLAGGAG--EAVQEGVTGLTLPADTVTAPDVAEALARIHDMC 660 (694)
T ss_pred hHHHHHHhcCEEEeccccccchHHHHHHHHcC-CeEEEECCCChH--HHccCCCCEEEeCCCCCChHHHHHHHHHHHhCh
Confidence 45566777777777755555688999999999 588888753222 344334445566655531 10 1244444433
Q ss_pred CHHHHHHHHHHHHH-HhhceEe
Q 011152 428 KQEQWTKMWERLKE-VVQHFEY 448 (492)
Q Consensus 428 ~~~~i~~Mr~~l~~-v~~~f~y 448 (492)
.. -.+|+++.++ +.+.|.|
T Consensus 661 ~~--~~~l~~~ar~~a~~~FS~ 680 (694)
T PRK15179 661 AA--DPGIARKAADWASARFSL 680 (694)
T ss_pred hc--cHHHHHHHHHHHHHhCCH
Confidence 21 2345555554 3345554
No 90
>PLN02275 transferase, transferring glycosyl groups
Probab=28.51 E-value=1.8e+02 Score=30.14 Aligned_cols=76 Identities=12% Similarity=0.100 Sum_probs=46.9
Q ss_pred CeEEEEeeccccCCCchhhHHHHHHhhcC--CCeEEEeCcccCCCcchhhhcccCCcEEEeeCCCC---CCCchHHHHHh
Q 011152 306 PTLAYFQGAIYRKDGGVIRQELYYLLKDE--KDVHFTFGSIQGDGVKNAGQGMASSKFCLNIAGDT---PSSNRLFDAIA 380 (492)
Q Consensus 306 ~~L~~FaG~~~~~~~~~iR~~L~~~~~~~--~~~~~~~g~~~~~~~~~y~~~m~~S~FCL~P~Gd~---~~s~RlfDAi~ 380 (492)
.+-+.+.|. |..|.+|.++.++. .++.+..|.. ..+++.+.|+.+..|+.|...+ .....++|||+
T Consensus 261 ~i~l~ivG~------G~~~~~l~~~~~~~~l~~v~~~~~~~---~~~~~~~~l~~aDv~v~~~~s~~~e~~p~~llEAmA 331 (371)
T PLN02275 261 RLLFIITGK------GPQKAMYEEKISRLNLRHVAFRTMWL---EAEDYPLLLGSADLGVSLHTSSSGLDLPMKVVDMFG 331 (371)
T ss_pred CeEEEEEeC------CCCHHHHHHHHHHcCCCceEEEcCCC---CHHHHHHHHHhCCEEEEeccccccccccHHHHHHHH
Confidence 366777774 44567776665532 2333321212 2356788899999988763211 12567999999
Q ss_pred cCceeEEeeCC
Q 011152 381 SHCVPVIISDE 391 (492)
Q Consensus 381 aGCIPViisd~ 391 (492)
+|+ |||.++.
T Consensus 332 ~G~-PVVa~~~ 341 (371)
T PLN02275 332 CGL-PVCAVSY 341 (371)
T ss_pred CCC-CEEEecC
Confidence 995 8888763
No 91
>PF05366 Sarcolipin: Sarcolipin; InterPro: IPR008028 Sarcolipin is a 31 amino acid integral membrane protein that regulates Ca-ATPase activity in skeletal muscle [].; GO: 0030234 enzyme regulator activity, 0016020 membrane; PDB: 1JDM_A.
Probab=28.21 E-value=78 Score=21.13 Aligned_cols=23 Identities=22% Similarity=0.333 Sum_probs=17.9
Q ss_pred ccchhHHHHHHHHHHHHHHHHhh
Q 011152 8 PSRFLFCLITISMFLLIISSSFL 30 (492)
Q Consensus 8 ~~~~~~~~~~~~~~~~~~~~~~~ 30 (492)
|-+-||.=|++..+--|+-|+++
T Consensus 4 strel~lnftvvlitvilmwllv 26 (31)
T PF05366_consen 4 STRELFLNFTVVLITVILMWLLV 26 (31)
T ss_dssp -SSSSHHHHHHHHHHHHHHHHHT
T ss_pred cHHHHHHhhhHHHHHHHHHHHHH
Confidence 44567888999888889999876
No 92
>TIGR00236 wecB UDP-N-acetylglucosamine 2-epimerase. Epimerase activity was also demonstrated in a bifunctional rat enzyme, for which the N-terminal domain appears to be orthologous. The set of proteins found above the suggested cutoff includes E. coli WecB in one of two deeply branched clusters and the rat UDP-N-acetylglucosamine 2-epimerase domain in the other.
Probab=27.14 E-value=4.8e+02 Score=26.67 Aligned_cols=119 Identities=23% Similarity=0.270 Sum_probs=61.9
Q ss_pred hhhHHHHHHhhcCCCeEEEeCcccCCCcchhhhcccCCcEEEeeCCCCCCCchHHHHHhcCceeEEeeCC-cccCccCCC
Q 011152 322 VIRQELYYLLKDEKDVHFTFGSIQGDGVKNAGQGMASSKFCLNIAGDTPSSNRLFDAIASHCVPVIISDE-IELPFEDVL 400 (492)
Q Consensus 322 ~iR~~L~~~~~~~~~~~~~~g~~~~~~~~~y~~~m~~S~FCL~P~Gd~~~s~RlfDAi~aGCIPViisd~-~~LPF~dvl 400 (492)
.++..+.+.+...+.+++ .+.. +..++...|..+.+++.+.| .-+.||+.+|| |||...+ -..| +.+
T Consensus 242 ~~~~~~~~~~~~~~~v~~-~~~~---~~~~~~~~l~~ad~vv~~Sg-----~~~~EA~a~g~-PvI~~~~~~~~~--e~~ 309 (365)
T TIGR00236 242 VVREPLHKHLGDSKRVHL-IEPL---EYLDFLNLAANSHLILTDSG-----GVQEEAPSLGK-PVLVLRDTTERP--ETV 309 (365)
T ss_pred HHHHHHHHHhCCCCCEEE-ECCC---ChHHHHHHHHhCCEEEECCh-----hHHHHHHHcCC-CEEECCCCCCCh--HHH
Confidence 455555555543333443 2322 23467788899999887654 23799999985 7887533 2222 333
Q ss_pred CCCcEEEEEeccccchhhhHHHHHhCC--CHHHHHHHHHHHHHHhhceEecCCCCCCCHHHHHHHHHHh
Q 011152 401 DYSEFCITVHSTDAIKKGFLLNLLRGI--KQEQWTKMWERLKEVVQHFEYQYPSQPGDAVDMIWEAVSR 467 (492)
Q Consensus 401 Dw~~fSV~I~e~dv~~~~~l~~iL~~I--~~~~i~~Mr~~l~~v~~~f~y~~p~~~~DAf~~il~~l~~ 467 (492)
. ....+.++ .|..+ |.+.|+.+ .++...+|.++. -.| ..++|.+-|++.|..
T Consensus 310 ~-~g~~~lv~-~d~~~---i~~ai~~ll~~~~~~~~~~~~~------~~~----g~~~a~~ri~~~l~~ 363 (365)
T TIGR00236 310 E-AGTNKLVG-TDKEN---ITKAAKRLLTDPDEYKKMSNAS------NPY----GDGEASERIVEELLN 363 (365)
T ss_pred h-cCceEEeC-CCHHH---HHHHHHHHHhChHHHHHhhhcC------CCC----cCchHHHHHHHHHHh
Confidence 3 33444554 33222 33322221 333333443221 112 236788888887754
No 93
>PF06024 DUF912: Nucleopolyhedrovirus protein of unknown function (DUF912); InterPro: IPR009261 This entry is represented by Autographa californica nuclear polyhedrosis virus (AcMNPV), Orf78; it is a family of uncharacterised viral proteins.
Probab=27.00 E-value=23 Score=30.53 Aligned_cols=26 Identities=23% Similarity=0.291 Sum_probs=19.7
Q ss_pred hHHHHHHHHHHHHHHHHhhhhccCCc
Q 011152 12 LFCLITISMFLLIISSSFLLQFSSTS 37 (492)
Q Consensus 12 ~~~~~~~~~~~~~~~~~~~~~~~~~~ 37 (492)
|+.+|++..+|+++.+|++||--..+
T Consensus 68 lls~v~IlVily~IyYFVILRer~~~ 93 (101)
T PF06024_consen 68 LLSFVCILVILYAIYYFVILRERQKS 93 (101)
T ss_pred HHHHHHHHHHHhhheEEEEEeccccc
Confidence 56677778888899999998855433
No 94
>PF13974 YebO: YebO-like protein
Probab=25.76 E-value=43 Score=27.85 Aligned_cols=21 Identities=14% Similarity=0.159 Sum_probs=16.7
Q ss_pred HHHHHHHHHHHHHHhhhhccC
Q 011152 15 LITISMFLLIISSSFLLQFSS 35 (492)
Q Consensus 15 ~~~~~~~~~~~~~~~~~~~~~ 35 (492)
+..++.++.++-|||+-|.|.
T Consensus 3 ~~~~~~lv~livWFFVnRaSv 23 (80)
T PF13974_consen 3 VSVLVLLVGLIVWFFVNRASV 23 (80)
T ss_pred ehHHHHHHHHHHHHHHHHHHH
Confidence 455677888999999999665
No 95
>PF12273 RCR: Chitin synthesis regulation, resistance to Congo red; InterPro: IPR020999 RCR proteins are ER membrane proteins that regulate chitin deposition in fungal cell walls. Although chitin, a linear polymer of beta-1,4-linked N-acetylglucosamine, constitutes only 2% of the cell wall it plays a vital role in the overall protection of the cell wall against stress, noxious chemicals and osmotic pressure changes. Congo red is a cell wall-disrupting benzidine-type dye extensively used in many cell wall mutant studies that specifically targets chitin in yeast cells and inhibits growth. RCR proteins render the yeasts resistant to Congo red by diminishing the content of chitin in the cell wall []. RCR proteins are probably regulating chitin synthase III interact directly with ubiquitin ligase Rsp5, and the VPEY motif is necessary for this, via interaction with the WW domains of Rsp5 [].
Probab=24.06 E-value=70 Score=28.51 Aligned_cols=14 Identities=29% Similarity=0.861 Sum_probs=5.6
Q ss_pred hHHHHHHHHHHHHH
Q 011152 12 LFCLITISMFLLII 25 (492)
Q Consensus 12 ~~~~~~~~~~~~~~ 25 (492)
||.+|+++.||||+
T Consensus 4 l~~iii~~i~l~~~ 17 (130)
T PF12273_consen 4 LFAIIIVAILLFLF 17 (130)
T ss_pred eHHHHHHHHHHHHH
Confidence 44444333333333
No 96
>PRK00025 lpxB lipid-A-disaccharide synthase; Reviewed
Probab=23.16 E-value=1e+02 Score=31.74 Aligned_cols=103 Identities=18% Similarity=0.223 Sum_probs=55.9
Q ss_pred hhhhcccCCcEEEeeCCCCCCCchHHHHHhcCceeEEeeCCc-ccCcc--CCCCCCcEE--------------EEEeccc
Q 011152 351 NAGQGMASSKFCLNIAGDTPSSNRLFDAIASHCVPVIISDEI-ELPFE--DVLDYSEFC--------------ITVHSTD 413 (492)
Q Consensus 351 ~y~~~m~~S~FCL~P~Gd~~~s~RlfDAi~aGCIPViisd~~-~LPF~--dvlDw~~fS--------------V~I~e~d 413 (492)
+..+.|+.+..++++.|. ...||+.+|| |||+.... .+|+. +.+....+. +..++.+
T Consensus 254 ~~~~~~~~aDl~v~~sG~-----~~lEa~a~G~-PvI~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~ 327 (380)
T PRK00025 254 QKREAMAAADAALAASGT-----VTLELALLKV-PMVVGYKVSPLTFWIAKRLVKVPYVSLPNLLAGRELVPELLQEEAT 327 (380)
T ss_pred cHHHHHHhCCEEEECccH-----HHHHHHHhCC-CEEEEEccCHHHHHHHHHHHcCCeeehHHHhcCCCcchhhcCCCCC
Confidence 356678888888887653 3559999995 77776443 12211 001111111 1111222
Q ss_pred cchhh-hHHHHHhCCCHHHHHHHHHHHHHHhhceEecCCCCCCCHHHHHHHHHHhh
Q 011152 414 AIKKG-FLLNLLRGIKQEQWTKMWERLKEVVQHFEYQYPSQPGDAVDMIWEAVSRK 468 (492)
Q Consensus 414 v~~~~-~l~~iL~~I~~~~i~~Mr~~l~~v~~~f~y~~p~~~~DAf~~il~~l~~R 468 (492)
..+.. .+.++|. .++...+|.++..++.+.+ . .+|.+.+++.+..-
T Consensus 328 ~~~l~~~i~~ll~--~~~~~~~~~~~~~~~~~~~--~-----~~a~~~~~~~i~~~ 374 (380)
T PRK00025 328 PEKLARALLPLLA--DGARRQALLEGFTELHQQL--R-----CGADERAAQAVLEL 374 (380)
T ss_pred HHHHHHHHHHHhc--CHHHHHHHHHHHHHHHHHh--C-----CCHHHHHHHHHHHH
Confidence 11100 1333333 5777788888887776654 1 26777777777654
No 97
>PLN03063 alpha,alpha-trehalose-phosphate synthase (UDP-forming); Provisional
Probab=22.34 E-value=1.8e+02 Score=34.08 Aligned_cols=90 Identities=10% Similarity=0.010 Sum_probs=55.3
Q ss_pred chhhhcccCCcEEEeeCCCCCCCchHHHHHhcCcee----EEeeCCcccCccCCCCCCcEEEEEeccccchhhh-HHHHH
Q 011152 350 KNAGQGMASSKFCLNIAGDTPSSNRLFDAIASHCVP----VIISDEIELPFEDVLDYSEFCITVHSTDAIKKGF-LLNLL 424 (492)
Q Consensus 350 ~~y~~~m~~S~FCL~P~Gd~~~s~RlfDAi~aGCIP----Viisd~~~LPF~dvlDw~~fSV~I~e~dv~~~~~-l~~iL 424 (492)
+++...++.+.-|+.|.=.....--..|||++|+ | ||+++---.+- .+ ..-++.|+..|...... |...|
T Consensus 367 ~el~aly~~ADvfvvtSlrEGmnLv~lEamA~g~-p~~gvlVlSe~~G~~~--~l--~~~allVnP~D~~~lA~AI~~aL 441 (797)
T PLN03063 367 NYLCALYAITDVMLVTSLRDGMNLVSYEFVACQK-AKKGVLVLSEFAGAGQ--SL--GAGALLVNPWNITEVSSAIKEAL 441 (797)
T ss_pred HHHHHHHHhCCEEEeCccccccCcchhhHheeec-CCCCCEEeeCCcCchh--hh--cCCeEEECCCCHHHHHHHHHHHH
Confidence 4567889999999998633333556999999998 5 78876421111 12 23578888777655322 44444
Q ss_pred hCCCHHHHHHHHHHHHHHhhc
Q 011152 425 RGIKQEQWTKMWERLKEVVQH 445 (492)
Q Consensus 425 ~~I~~~~i~~Mr~~l~~v~~~ 445 (492)
. .++++..++.+.+.+....
T Consensus 442 ~-m~~~er~~r~~~~~~~v~~ 461 (797)
T PLN03063 442 N-MSDEERETRHRHNFQYVKT 461 (797)
T ss_pred h-CCHHHHHHHHHHHHHhhhh
Confidence 3 4666666555555544433
No 98
>COG3977 Alanine-alpha-ketoisovalerate (or valine-pyruvate) aminotransferase [Amino acid transport and metabolism]
Probab=21.72 E-value=1.2e+02 Score=31.73 Aligned_cols=97 Identities=24% Similarity=0.386 Sum_probs=56.3
Q ss_pred hHHHHHhc-CceeEEeeCCcccCccCC------CCCCc-----------------EEEEEeccccchhhhHHHHHh----
Q 011152 374 RLFDAIAS-HCVPVIISDEIELPFEDV------LDYSE-----------------FCITVHSTDAIKKGFLLNLLR---- 425 (492)
Q Consensus 374 RlfDAi~a-GCIPViisd~~~LPF~dv------lDw~~-----------------fSV~I~e~dv~~~~~l~~iL~---- 425 (492)
+=.||++. .-||+||...|-.||-.+ +-|.+ ..|.|..+.+.+ ..+-+.
T Consensus 202 ~kldalA~~~giPliIDnAYg~PFP~iifsd~~~~w~~NiilC~SLSK~GLPG~R~GIiIane~viq---aitnmn~iis 278 (417)
T COG3977 202 AKLDALARQHGIPLIIDNAYGVPFPGIIFSDATPLWNENIILCMSLSKLGLPGSRCGIIIANEKVIQ---AITNMNGIIS 278 (417)
T ss_pred HHHHHHhhhcCCcEEEecccCCCCCceecccccccCCCCEEEEeehhhcCCCCcceeEEEccHHHHH---HHHhccceee
Confidence 34577765 679999999998888764 23332 223333333222 111111
Q ss_pred ----CCCHHHHHHHHHHH------HHHhhceEecCCCCCCCHHHHHHHHHHhhchhhhhhhhccc
Q 011152 426 ----GIKQEQWTKMWERL------KEVVQHFEYQYPSQPGDAVDMIWEAVSRKVPSVRFKIHKSN 480 (492)
Q Consensus 426 ----~I~~~~i~~Mr~~l------~~v~~~f~y~~p~~~~DAf~~il~~l~~Rv~~~r~~~~~~~ 480 (492)
++-++=..+|-+.. .+|++-|.+ .-+++++..|++-+|..|..+||..
T Consensus 279 Lap~~~G~Aia~~mie~gdl~rlseqVIrPFY~-------~~~q~~~~~l~~~lp~~~~~iHkpE 336 (417)
T COG3977 279 LAPGRMGPAIAAEMIESGDLLRLSEQVIRPFYR-------NRVQTTIAILRRYLPEYRCLIHKPE 336 (417)
T ss_pred ecCCCccHHHHHHHhhcchHHHHHHHhhhHHHH-------HHHHHHHHHHHHhcCccceeeecCC
Confidence 12233334443321 124444444 3489999999999999999999854
No 99
>PLN03194 putative disease resistance protein; Provisional
Probab=20.72 E-value=7.7e+02 Score=23.81 Aligned_cols=142 Identities=13% Similarity=0.085 Sum_probs=77.1
Q ss_pred CCCeEEEEeeccccCCCchhhHHHHHHhhcCCC-eEEEeCcccCCC--cchhhhcccCCcEEEeeCCCCCC-----CchH
Q 011152 304 QRPTLAYFQGAIYRKDGGVIRQELYYLLKDEKD-VHFTFGSIQGDG--VKNAGQGMASSKFCLNIAGDTPS-----SNRL 375 (492)
Q Consensus 304 ~R~~L~~FaG~~~~~~~~~iR~~L~~~~~~~~~-~~~~~g~~~~~~--~~~y~~~m~~S~FCL~P~Gd~~~-----s~Rl 375 (492)
.=..+++|+|.-- ....=..|.+.+....- +.++......++ .....+.++.|++|++.-...+. -.-|
T Consensus 26 ~yDVFISFrG~Dt---R~~FvshL~~aL~~~GI~vF~D~~el~~G~~i~~~L~~AIeeSri~IvVfS~~Ya~S~WCLdEL 102 (187)
T PLN03194 26 PCDVFINHRGIDT---KRTIATLLYDHLSRLNLRPFLDNKNMKPGDKLFDKINSAIRNCKVGVAVFSPRYCESYFCLHEL 102 (187)
T ss_pred CCcEEEeCCCccc---cccHHHHHHHHHHHCCCEEEEcCccccCCCcHHHHHHHHHHhCeEEEEEECCCcccchhHHHHH
Confidence 3457888888621 11233445555554432 222211222221 12456678999999986433221 1123
Q ss_pred HHHHhcC--ceeEEeeCCcccCccCCCCCCcEEEEEeccccchhhhHHHHHhCCCHHHHHHHHHHHHHHhhceEecCCC-
Q 011152 376 FDAIASH--CVPVIISDEIELPFEDVLDYSEFCITVHSTDAIKKGFLLNLLRGIKQEQWTKMWERLKEVVQHFEYQYPS- 452 (492)
Q Consensus 376 fDAi~aG--CIPViisd~~~LPF~dvlDw~~fSV~I~e~dv~~~~~l~~iL~~I~~~~i~~Mr~~l~~v~~~f~y~~p~- 452 (492)
..++..+ -|||+. .|+.+|+.+. .-..-+.+++.+-|++|.++...--|....
T Consensus 103 ~~I~e~~~~ViPIFY-------------------~VdPsdVr~q-----~~~~~~~e~v~~Wr~AL~~va~l~G~~~~~~ 158 (187)
T PLN03194 103 ALIMESKKRVIPIFC-------------------DVKPSQLRVV-----DNGTCPDEEIRRFNWALEEAKYTVGLTFDSL 158 (187)
T ss_pred HHHHHcCCEEEEEEe-------------------cCCHHHhhcc-----ccCCCCHHHHHHHHHHHHHHhccccccCCCC
Confidence 3333333 466662 2333444320 011236789999999999998875554332
Q ss_pred --CCCCHHHHHHHHHHhhchhh
Q 011152 453 --QPGDAVDMIWEAVSRKVPSV 472 (492)
Q Consensus 453 --~~~DAf~~il~~l~~Rv~~~ 472 (492)
...+.++.|+..|.++|-.+
T Consensus 159 ~~~e~e~i~~iv~~v~k~l~~~ 180 (187)
T PLN03194 159 KGNWSEVVTMASDAVIKNLIEL 180 (187)
T ss_pred CCCHHHHHHHHHHHHHHHHHHH
Confidence 23478888999988887654
Done!