Query 011157
Match_columns 492
No_of_seqs 220 out of 563
Neff 6.0
Searched_HMMs 46136
Date Fri Mar 29 08:45:19 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/011157.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/011157hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 PF05761 5_nucleotid: 5' nucle 100.0 1E-137 2E-142 1092.0 28.2 443 37-486 1-448 (448)
2 KOG2470 Similar to IMP-GMP spe 100.0 3E-124 5E-129 933.7 27.3 467 1-485 20-495 (510)
3 TIGR02244 HAD-IG-Ncltidse HAD 100.0 1E-101 3E-106 792.6 30.4 331 37-370 1-336 (343)
4 KOG2469 IMP-GMP specific 5'-nu 100.0 2.7E-91 5.8E-96 712.1 24.1 408 31-455 10-424 (424)
5 TIGR02253 CTE7 HAD superfamily 99.7 3.8E-16 8.3E-21 149.9 13.2 106 216-359 92-197 (221)
6 PLN02770 haloacid dehalogenase 99.6 4E-15 8.7E-20 147.0 15.3 103 217-358 107-209 (248)
7 TIGR01422 phosphonatase phosph 99.6 3E-15 6.4E-20 147.6 13.9 104 217-359 98-203 (253)
8 PRK13226 phosphoglycolate phos 99.6 7.1E-15 1.5E-19 143.4 14.3 104 216-358 93-196 (229)
9 PLN03243 haloacid dehalogenase 99.6 7.9E-15 1.7E-19 146.6 14.3 102 217-357 108-209 (260)
10 PRK13288 pyrophosphatase PpaX; 99.6 1.1E-14 2.3E-19 139.9 14.3 104 217-359 81-184 (214)
11 COG0637 Predicted phosphatase/ 99.6 6.6E-15 1.4E-19 143.6 12.0 103 217-358 85-187 (221)
12 PRK10725 fructose-1-P/6-phosph 99.6 1.1E-14 2.5E-19 136.2 12.9 98 219-357 89-186 (188)
13 PRK13478 phosphonoacetaldehyde 99.6 2.9E-14 6.2E-19 142.1 15.6 104 217-359 100-205 (267)
14 PLN02575 haloacid dehalogenase 99.6 2.2E-14 4.8E-19 150.2 14.2 102 218-358 216-317 (381)
15 TIGR03351 PhnX-like phosphonat 99.6 4.8E-14 1E-18 135.6 15.4 104 218-360 87-194 (220)
16 PRK10826 2-deoxyglucose-6-phos 99.6 5.4E-14 1.2E-18 135.9 15.4 104 217-359 91-194 (222)
17 TIGR01449 PGP_bact 2-phosphogl 99.6 3E-14 6.4E-19 135.8 13.0 104 215-357 82-185 (213)
18 TIGR02252 DREG-2 REG-2-like, H 99.6 4.9E-14 1.1E-18 133.9 13.8 99 218-355 105-203 (203)
19 TIGR01990 bPGM beta-phosphoglu 99.5 8.6E-14 1.9E-18 129.6 14.0 98 218-356 87-184 (185)
20 PLN02940 riboflavin kinase 99.5 7.6E-14 1.6E-18 146.8 14.5 104 217-358 92-195 (382)
21 PRK10563 6-phosphogluconate ph 99.5 1.6E-13 3.5E-18 132.1 14.3 100 216-357 86-186 (221)
22 PRK11587 putative phosphatase; 99.5 5.7E-13 1.2E-17 128.7 15.1 102 217-358 82-183 (218)
23 TIGR02009 PGMB-YQAB-SF beta-ph 99.5 5.8E-13 1.2E-17 124.0 13.7 100 216-356 86-185 (185)
24 PRK13222 phosphoglycolate phos 99.5 1.6E-12 3.4E-17 124.9 16.7 104 217-359 92-195 (226)
25 PRK13223 phosphoglycolate phos 99.5 1.1E-12 2.4E-17 131.7 15.1 103 217-358 100-202 (272)
26 COG2179 Predicted hydrolase of 99.4 2.9E-13 6.2E-18 125.5 9.5 104 219-371 47-150 (175)
27 PLN02779 haloacid dehalogenase 99.4 1.7E-12 3.8E-17 131.3 15.9 106 217-359 143-248 (286)
28 PRK10748 flavin mononucleotide 99.4 1E-12 2.2E-17 129.0 13.1 99 217-359 112-210 (238)
29 COG1011 Predicted hydrolase (H 99.4 1.9E-12 4.1E-17 124.4 14.0 107 216-361 97-203 (229)
30 COG0546 Gph Predicted phosphat 99.4 2.2E-12 4.9E-17 125.3 13.9 106 216-360 87-192 (220)
31 PRK13225 phosphoglycolate phos 99.4 1.5E-12 3.2E-17 131.2 12.9 102 217-360 141-242 (273)
32 PF13419 HAD_2: Haloacid dehal 99.4 5.3E-13 1.2E-17 120.9 6.8 104 214-356 73-176 (176)
33 TIGR01428 HAD_type_II 2-haloal 99.4 5.3E-13 1.2E-17 126.5 7.0 103 218-359 92-194 (198)
34 TIGR01509 HAD-SF-IA-v3 haloaci 99.3 3.3E-12 7.2E-17 118.2 9.4 100 217-356 84-183 (183)
35 PRK14988 GMP/IMP nucleotidase; 99.3 1.2E-12 2.7E-17 127.7 6.4 102 217-357 92-193 (224)
36 PRK09456 ?-D-glucose-1-phospha 99.3 1.5E-12 3.2E-17 124.1 6.1 102 219-358 85-186 (199)
37 PLN02919 haloacid dehalogenase 99.3 2.3E-11 5E-16 142.5 16.3 103 219-360 162-265 (1057)
38 PRK09449 dUMP phosphatase; Pro 99.3 3.6E-12 7.7E-17 122.9 7.0 103 217-358 94-197 (224)
39 TIGR01454 AHBA_synth_RP 3-amin 99.3 5.4E-12 1.2E-16 120.4 7.2 105 216-359 73-177 (205)
40 PRK06698 bifunctional 5'-methy 99.3 4E-11 8.6E-16 128.9 13.7 101 217-359 329-429 (459)
41 TIGR02254 YjjG/YfnB HAD superf 99.2 3.2E-11 6.9E-16 115.5 6.9 104 217-359 96-200 (224)
42 TIGR02247 HAD-1A3-hyp Epoxide 99.2 2.6E-11 5.6E-16 116.0 5.7 105 217-358 93-197 (211)
43 TIGR01662 HAD-SF-IIIA HAD-supe 99.2 5.6E-11 1.2E-15 105.8 7.2 104 213-358 20-132 (132)
44 TIGR01993 Pyr-5-nucltdase pyri 99.2 3.4E-11 7.4E-16 113.0 5.8 99 216-356 82-184 (184)
45 KOG3109 Haloacid dehalogenase- 99.1 1.1E-09 2.4E-14 105.8 13.4 193 47-360 14-208 (244)
46 PLN02811 hydrolase 99.1 2.5E-10 5.5E-15 110.5 7.2 104 219-359 79-186 (220)
47 PHA02597 30.2 hypothetical pro 99.1 3.6E-10 7.8E-15 107.1 8.1 102 217-359 73-176 (197)
48 TIGR01691 enolase-ppase 2,3-di 99.0 5.4E-10 1.2E-14 109.4 8.0 106 217-360 94-199 (220)
49 TIGR01685 MDP-1 magnesium-depe 99.0 2.2E-10 4.8E-15 108.4 4.6 104 217-359 44-159 (174)
50 TIGR01656 Histidinol-ppas hist 99.0 3.1E-10 6.8E-15 103.5 4.9 104 218-357 27-145 (147)
51 TIGR01668 YqeG_hyp_ppase HAD s 99.0 8.9E-10 1.9E-14 103.3 7.7 98 218-362 43-141 (170)
52 PRK06769 hypothetical protein; 99.0 4.7E-10 1E-14 105.5 5.4 104 218-360 28-140 (173)
53 KOG3085 Predicted hydrolase (H 99.0 4.3E-10 9.2E-15 110.9 4.7 105 213-357 109-213 (237)
54 TIGR01261 hisB_Nterm histidino 98.9 1.4E-09 3.1E-14 101.4 6.3 110 216-361 27-152 (161)
55 TIGR01549 HAD-SF-IA-v1 haloaci 98.9 1.2E-09 2.7E-14 99.1 5.7 89 220-350 66-154 (154)
56 PRK08942 D,D-heptose 1,7-bisph 98.9 2.2E-09 4.8E-14 101.0 7.3 107 217-359 28-149 (181)
57 TIGR01548 HAD-SF-IA-hyp1 haloa 98.9 2.5E-09 5.5E-14 101.6 6.0 88 221-348 109-196 (197)
58 TIGR00213 GmhB_yaeD D,D-heptos 98.9 4.2E-09 9.1E-14 98.8 7.2 112 217-358 25-152 (176)
59 KOG2914 Predicted haloacid-hal 98.8 1.2E-08 2.7E-13 99.9 8.8 103 220-358 94-197 (222)
60 TIGR01664 DNA-3'-Pase DNA 3'-p 98.8 7.2E-09 1.6E-13 97.1 6.0 103 212-354 36-159 (166)
61 cd01427 HAD_like Haloacid deha 98.8 8.5E-09 1.9E-13 88.9 5.7 116 217-356 23-139 (139)
62 smart00577 CPDc catalytic doma 98.7 3.4E-08 7.3E-13 90.5 8.5 97 214-352 41-137 (148)
63 PF09419 PGP_phosphatase: Mito 98.7 1E-07 2.3E-12 89.7 9.4 92 219-358 60-165 (168)
64 TIGR01493 HAD-SF-IA-v2 Haloaci 98.6 6.5E-09 1.4E-13 96.3 1.0 85 218-348 90-174 (175)
65 TIGR01681 HAD-SF-IIIC HAD-supe 98.6 2.7E-08 6E-13 89.1 4.7 86 219-341 30-120 (128)
66 TIGR01458 HAD-SF-IIA-hyp3 HAD- 98.6 1.2E-08 2.5E-13 101.9 -0.0 103 221-359 123-226 (257)
67 TIGR00338 serB phosphoserine p 98.5 1.3E-07 2.9E-12 90.8 5.9 108 217-353 84-191 (219)
68 TIGR01491 HAD-SF-IB-PSPlk HAD- 98.5 3.1E-07 6.6E-12 86.5 8.2 110 218-356 80-189 (201)
69 PHA02530 pseT polynucleotide k 98.5 1.3E-07 2.7E-12 95.6 5.3 108 219-358 188-297 (300)
70 PRK05446 imidazole glycerol-ph 98.5 2.7E-07 5.9E-12 96.4 7.8 106 217-358 29-149 (354)
71 TIGR01672 AphA HAD superfamily 98.5 5.2E-07 1.1E-11 89.5 8.9 101 212-358 108-212 (237)
72 PRK11133 serB phosphoserine ph 98.4 1.1E-06 2.3E-11 90.9 10.9 108 217-355 180-289 (322)
73 TIGR01452 PGP_euk phosphoglyco 98.4 4E-08 8.6E-13 99.0 -0.1 102 221-359 146-249 (279)
74 TIGR01459 HAD-SF-IIA-hyp4 HAD- 98.4 1E-07 2.3E-12 93.8 1.4 100 221-357 141-241 (242)
75 PTZ00445 p36-lilke protein; Pr 98.4 6.6E-07 1.4E-11 86.8 6.6 141 190-358 48-206 (219)
76 PRK11009 aphA acid phosphatase 98.2 4.9E-06 1.1E-10 82.6 9.4 108 205-358 101-212 (237)
77 PRK09552 mtnX 2-hydroxy-3-keto 98.2 3.8E-06 8.3E-11 81.4 8.0 104 217-351 73-181 (219)
78 TIGR02726 phenyl_P_delta pheny 98.2 1.3E-06 2.8E-11 82.4 3.5 81 227-355 43-123 (169)
79 PRK11590 hypothetical protein; 98.1 7.8E-05 1.7E-09 72.0 14.4 94 218-343 95-189 (211)
80 TIGR01490 HAD-SF-IB-hyp1 HAD-s 98.1 7.3E-06 1.6E-10 77.6 7.1 107 219-358 88-198 (202)
81 TIGR01489 DKMTPPase-SF 2,3-dik 98.1 1.5E-05 3.2E-10 74.1 8.7 111 217-350 71-182 (188)
82 PF00702 Hydrolase: haloacid d 98.1 3.6E-06 7.8E-11 79.5 4.4 85 220-350 129-215 (215)
83 TIGR01686 FkbH FkbH-like domai 98.1 6.3E-06 1.4E-10 84.9 6.4 90 220-349 33-122 (320)
84 PLN02645 phosphoglycolate phos 98.0 8.7E-07 1.9E-11 90.9 -0.2 101 223-359 175-277 (311)
85 TIGR02251 HIF-SF_euk Dullard-l 98.0 1.4E-05 3.1E-10 74.5 7.3 105 212-358 36-140 (162)
86 TIGR03333 salvage_mtnX 2-hydro 98.0 2.8E-05 6E-10 75.2 9.3 101 217-351 69-177 (214)
87 COG0647 NagD Predicted sugar p 98.0 2.9E-05 6.3E-10 78.4 9.7 44 318-361 196-239 (269)
88 TIGR01670 YrbI-phosphatas 3-de 98.0 6.6E-06 1.4E-10 75.9 4.2 85 226-359 36-120 (154)
89 PLN02954 phosphoserine phospha 98.0 1.9E-05 4.1E-10 76.1 7.4 110 219-357 85-196 (224)
90 PRK10444 UMP phosphatase; Prov 97.9 2.1E-05 4.5E-10 78.5 7.0 43 318-360 180-222 (248)
91 PRK09484 3-deoxy-D-manno-octul 97.9 9.3E-06 2E-10 77.0 4.3 83 225-356 55-137 (183)
92 PF13242 Hydrolase_like: HAD-h 97.9 3E-06 6.5E-11 68.7 0.6 43 319-361 11-53 (75)
93 PRK13582 thrH phosphoserine ph 97.8 4.7E-05 1E-09 72.3 7.0 99 217-351 67-165 (205)
94 TIGR01457 HAD-SF-IIA-hyp2 HAD- 97.8 7E-06 1.5E-10 81.6 1.0 46 310-360 181-226 (249)
95 TIGR01663 PNK-3'Pase polynucle 97.7 5.8E-05 1.3E-09 82.9 6.1 97 210-347 189-301 (526)
96 PRK08238 hypothetical protein; 97.6 0.00023 5E-09 77.5 8.8 94 220-359 74-167 (479)
97 TIGR01488 HAD-SF-IB Haloacid D 97.5 0.0001 2.2E-09 68.0 5.0 100 219-346 74-174 (177)
98 PRK10530 pyridoxal phosphate ( 97.5 0.00059 1.3E-08 67.5 9.9 37 318-356 204-240 (272)
99 TIGR01544 HAD-SF-IE haloacid d 97.3 0.00053 1.1E-08 69.7 7.1 113 217-357 120-239 (277)
100 TIGR01459 HAD-SF-IIA-hyp4 HAD- 97.3 0.00037 8E-09 68.7 5.8 79 219-340 25-106 (242)
101 TIGR01460 HAD-SF-IIA Haloacid 97.3 6.3E-05 1.4E-09 74.1 -0.0 43 310-357 191-234 (236)
102 TIGR01684 viral_ppase viral ph 97.0 0.0015 3.2E-08 66.8 7.3 66 201-280 133-199 (301)
103 KOG3040 Predicted sugar phosph 96.8 0.0024 5.2E-08 62.1 5.9 148 201-357 14-226 (262)
104 TIGR02137 HSK-PSP phosphoserin 96.7 0.0049 1.1E-07 59.7 7.8 109 217-363 67-177 (203)
105 KOG2882 p-Nitrophenyl phosphat 96.7 0.0031 6.6E-08 64.3 6.5 109 221-368 168-280 (306)
106 TIGR01456 CECR5 HAD-superfamil 96.7 0.00085 1.9E-08 69.3 2.4 31 329-359 263-293 (321)
107 TIGR02250 FCP1_euk FCP1-like p 96.7 0.0059 1.3E-07 56.9 7.8 87 212-341 52-139 (156)
108 TIGR01525 ATPase-IB_hvy heavy 96.7 0.0022 4.7E-08 71.1 5.7 82 219-350 385-467 (556)
109 PF12689 Acid_PPase: Acid Phos 96.7 0.0086 1.9E-07 56.7 8.8 106 220-363 47-157 (169)
110 PF06888 Put_Phosphatase: Puta 96.6 0.011 2.5E-07 58.7 9.7 111 217-350 70-189 (234)
111 PHA03398 viral phosphatase sup 96.6 0.0041 8.9E-08 63.7 6.5 66 201-280 135-201 (303)
112 COG0241 HisB Histidinol phosph 96.6 0.0048 1E-07 59.0 6.5 110 219-361 32-153 (181)
113 TIGR01512 ATPase-IB2_Cd heavy 96.4 0.0031 6.7E-08 69.6 4.7 83 219-351 363-446 (536)
114 COG4229 Predicted enolase-phos 96.4 0.0079 1.7E-07 57.4 6.4 116 197-360 90-207 (229)
115 COG0560 SerB Phosphoserine pho 95.8 0.032 6.9E-07 54.5 7.9 95 217-343 76-173 (212)
116 TIGR01545 YfhB_g-proteo haloac 95.8 0.069 1.5E-06 51.9 10.1 93 218-343 94-188 (210)
117 TIGR01511 ATPase-IB1_Cu copper 95.6 0.019 4E-07 63.9 6.1 82 219-351 406-487 (562)
118 PF12710 HAD: haloacid dehalog 94.4 0.051 1.1E-06 50.4 4.6 35 221-255 92-126 (192)
119 TIGR01533 lipo_e_P4 5'-nucleot 94.2 0.12 2.6E-06 52.4 6.9 53 219-277 119-172 (266)
120 PLN02645 phosphoglycolate phos 94.1 0.1 2.3E-06 53.6 6.4 53 219-277 45-97 (311)
121 KOG2961 Predicted hydrolase (H 93.8 0.55 1.2E-05 44.0 9.7 46 318-363 124-173 (190)
122 COG4359 Uncharacterized conser 93.7 0.25 5.5E-06 47.5 7.5 57 197-256 55-111 (220)
123 PRK10671 copA copper exporting 93.5 0.087 1.9E-06 61.3 5.0 81 221-351 653-733 (834)
124 PF08645 PNK3P: Polynucleotide 93.2 0.15 3.2E-06 47.6 5.1 34 210-243 21-54 (159)
125 PF03031 NIF: NLI interacting 93.1 0.15 3.4E-06 46.6 5.2 56 213-277 31-86 (159)
126 COG4996 Predicted phosphatase 92.0 0.19 4.1E-06 45.9 3.9 60 209-277 32-91 (164)
127 PF05152 DUF705: Protein of un 91.7 0.42 9.1E-06 48.8 6.5 64 212-284 136-199 (297)
128 KOG1615 Phosphoserine phosphat 91.2 1.3 2.9E-05 43.1 9.0 95 219-343 89-186 (227)
129 PF13344 Hydrolase_6: Haloacid 91.1 0.3 6.4E-06 42.1 4.2 35 219-253 15-49 (101)
130 PF11019 DUF2608: Protein of u 90.0 2 4.4E-05 43.1 9.6 124 213-356 76-208 (252)
131 COG4850 Uncharacterized conser 89.6 1.1 2.3E-05 46.7 7.3 58 220-277 198-260 (373)
132 TIGR01689 EcbF-BcbF capsule bi 89.5 0.83 1.8E-05 41.3 5.8 99 202-330 9-124 (126)
133 COG1778 Low specificity phosph 88.1 0.79 1.7E-05 43.1 4.7 73 227-352 44-121 (170)
134 TIGR01522 ATPase-IIA2_Ca golgi 87.9 1 2.3E-05 52.9 6.8 105 220-351 530-638 (884)
135 TIGR01993 Pyr-5-nucltdase pyri 87.9 0.68 1.5E-05 43.2 4.3 39 49-87 1-39 (184)
136 TIGR01452 PGP_euk phosphoglyco 87.5 1.3 2.8E-05 44.7 6.3 27 219-245 19-45 (279)
137 PRK11033 zntA zinc/cadmium/mer 87.0 0.77 1.7E-05 53.0 4.9 36 220-255 570-605 (741)
138 COG5610 Predicted hydrolase (H 86.9 1.4 3.1E-05 47.7 6.4 112 217-365 98-210 (635)
139 PRK14988 GMP/IMP nucleotidase; 85.5 0.83 1.8E-05 44.5 3.6 43 44-87 6-48 (224)
140 KOG3120 Predicted haloacid deh 85.0 2.8 6.2E-05 41.6 6.9 50 219-277 85-135 (256)
141 KOG2469 IMP-GMP specific 5'-nu 82.5 0.02 4.3E-07 60.6 -9.6 241 34-297 40-290 (424)
142 PRK03669 mannosyl-3-phosphogly 81.4 1.8 4E-05 43.2 4.3 43 43-87 2-44 (271)
143 TIGR02254 YjjG/YfnB HAD superf 80.8 1.6 3.4E-05 41.5 3.4 18 48-65 1-18 (224)
144 PLN02954 phosphoserine phospha 79.5 1.7 3.6E-05 41.7 3.1 16 46-61 10-25 (224)
145 PRK13582 thrH phosphoserine ph 79.4 1.6 3.4E-05 41.2 2.9 13 48-60 1-13 (205)
146 COG0561 Cof Predicted hydrolas 78.6 2.2 4.9E-05 42.1 3.8 25 318-343 194-218 (264)
147 TIGR01487 SPP-like sucrose-pho 78.2 2.4 5.1E-05 40.6 3.8 36 318-354 152-187 (215)
148 KOG4549 Magnesium-dependent ph 78.2 8.6 0.00019 35.1 6.9 107 200-341 24-134 (144)
149 PRK09449 dUMP phosphatase; Pro 77.9 2 4.3E-05 41.2 3.1 16 47-62 2-17 (224)
150 TIGR01457 HAD-SF-IIA-hyp2 HAD- 77.0 3.3 7.2E-05 41.1 4.5 52 220-277 19-70 (249)
151 TIGR01458 HAD-SF-IIA-hyp3 HAD- 76.4 2.9 6.3E-05 41.8 3.9 36 219-254 22-57 (257)
152 TIGR01116 ATPase-IIA1_Ca sarco 74.4 6.8 0.00015 46.4 6.8 108 220-351 539-651 (917)
153 PRK10513 sugar phosphate phosp 73.3 3.5 7.7E-05 40.7 3.6 37 318-356 201-237 (270)
154 TIGR01548 HAD-SF-IA-hyp1 haloa 73.1 2.9 6.3E-05 39.4 2.8 17 49-65 1-17 (197)
155 PTZ00174 phosphomannomutase; P 73.0 4.3 9.2E-05 40.1 4.1 37 47-85 4-40 (247)
156 smart00775 LNS2 LNS2 domain. T 72.7 6 0.00013 36.7 4.8 36 220-255 29-64 (157)
157 TIGR01497 kdpB K+-transporting 71.4 8.6 0.00019 44.1 6.5 35 221-255 449-483 (675)
158 TIGR00338 serB phosphoserine p 71.1 2.3 5E-05 40.6 1.7 18 45-62 11-28 (219)
159 COG0731 Fe-S oxidoreductases [ 69.4 8.1 0.00018 39.9 5.2 28 220-247 94-122 (296)
160 KOG2630 Enolase-phosphatase E- 69.3 9.3 0.0002 38.2 5.4 111 200-358 115-225 (254)
161 PRK10976 putative hydrolase; P 68.7 5.2 0.00011 39.5 3.7 37 318-356 195-231 (266)
162 TIGR01460 HAD-SF-IIA Haloacid 68.6 11 0.00025 36.9 6.0 35 220-254 16-50 (236)
163 PF06941 NT5C: 5' nucleotidase 67.1 8.1 0.00018 36.6 4.5 30 217-246 72-101 (191)
164 TIGR01684 viral_ppase viral ph 67.1 6.7 0.00015 40.5 4.1 48 41-90 119-169 (301)
165 TIGR01675 plant-AP plant acid 64.4 12 0.00027 37.2 5.3 37 219-255 121-157 (229)
166 TIGR01428 HAD_type_II 2-haloal 64.3 3.6 7.9E-05 38.6 1.5 17 48-64 1-17 (198)
167 TIGR01491 HAD-SF-IB-PSPlk HAD- 64.2 5.6 0.00012 37.0 2.7 19 47-65 3-21 (201)
168 PHA03398 viral phosphatase sup 63.9 7.2 0.00016 40.4 3.6 46 42-89 122-170 (303)
169 TIGR02247 HAD-1A3-hyp Epoxide 63.2 4 8.6E-05 38.8 1.6 16 48-63 2-17 (211)
170 KOG2882 p-Nitrophenyl phosphat 62.4 7 0.00015 40.4 3.2 32 219-250 39-70 (306)
171 PRK15126 thiamin pyrimidine py 60.7 9.2 0.0002 37.9 3.7 37 318-356 193-229 (272)
172 COG2217 ZntA Cation transport 60.0 15 0.00032 42.5 5.5 35 221-255 540-574 (713)
173 PF08645 PNK3P: Polynucleotide 59.8 5 0.00011 37.3 1.5 16 49-64 1-16 (159)
174 TIGR01689 EcbF-BcbF capsule bi 59.7 5.2 0.00011 36.1 1.6 15 49-63 2-16 (126)
175 PRK14010 potassium-transportin 59.7 15 0.00032 42.2 5.5 36 220-255 443-478 (673)
176 PLN02423 phosphomannomutase 58.3 9.2 0.0002 37.9 3.2 36 321-357 193-231 (245)
177 TIGR02463 MPGP_rel mannosyl-3- 58.1 16 0.00034 34.9 4.7 34 222-255 20-53 (221)
178 PRK10513 sugar phosphate phosp 57.5 27 0.00058 34.4 6.4 36 220-255 22-57 (270)
179 PRK00192 mannosyl-3-phosphogly 57.3 23 0.0005 35.3 5.9 35 221-255 24-58 (273)
180 TIGR01484 HAD-SF-IIB HAD-super 57.2 17 0.00037 34.2 4.7 36 219-254 18-53 (204)
181 TIGR01482 SPP-subfamily Sucros 57.2 7.2 0.00016 37.2 2.2 37 318-356 154-190 (225)
182 PF00702 Hydrolase: haloacid d 57.1 9.3 0.0002 35.6 2.9 19 48-66 1-19 (215)
183 TIGR01454 AHBA_synth_RP 3-amin 56.3 7.5 0.00016 36.8 2.1 15 51-65 1-15 (205)
184 PF09949 DUF2183: Uncharacteri 56.2 25 0.00053 30.5 5.1 27 237-263 2-28 (100)
185 TIGR01485 SPP_plant-cyano sucr 55.6 14 0.00031 36.3 4.0 47 318-366 172-218 (249)
186 PF06941 NT5C: 5' nucleotidase 55.2 6.6 0.00014 37.1 1.5 26 333-359 139-164 (191)
187 PF13419 HAD_2: Haloacid dehal 55.0 8.3 0.00018 34.3 2.1 14 51-64 1-14 (176)
188 PRK01122 potassium-transportin 54.8 18 0.00039 41.6 5.1 36 220-255 447-482 (679)
189 PF00834 Ribul_P_3_epim: Ribul 54.7 20 0.00044 34.8 4.8 50 221-283 92-141 (201)
190 TIGR01493 HAD-SF-IA-v2 Haloaci 54.7 7.5 0.00016 35.6 1.8 16 50-65 1-16 (175)
191 smart00775 LNS2 LNS2 domain. T 54.4 12 0.00025 34.8 3.0 14 50-63 1-14 (157)
192 TIGR01549 HAD-SF-IA-v1 haloaci 54.3 8.8 0.00019 34.3 2.1 16 50-65 1-16 (154)
193 TIGR02463 MPGP_rel mannosyl-3- 54.0 12 0.00025 35.9 3.0 36 318-354 184-219 (221)
194 PRK01158 phosphoglycolate phos 53.7 8.6 0.00019 36.9 2.1 35 318-353 162-196 (230)
195 PF12689 Acid_PPase: Acid Phos 53.5 6.9 0.00015 37.1 1.4 15 48-62 3-17 (169)
196 PLN02887 hydrolase family prot 52.4 15 0.00033 41.4 4.0 36 47-84 307-342 (580)
197 COG0561 Cof Predicted hydrolas 52.2 22 0.00047 35.1 4.7 36 220-255 22-57 (264)
198 TIGR01509 HAD-SF-IA-v3 haloaci 51.4 5.5 0.00012 36.3 0.3 16 50-65 1-16 (183)
199 TIGR02461 osmo_MPG_phos mannos 50.8 15 0.00033 35.9 3.3 32 319-351 187-220 (225)
200 PRK10444 UMP phosphatase; Prov 49.3 17 0.00036 36.3 3.4 35 48-85 1-35 (248)
201 TIGR00099 Cof-subfamily Cof su 48.8 28 0.0006 34.1 4.9 36 220-255 18-53 (256)
202 TIGR01672 AphA HAD superfamily 48.6 9 0.0002 38.2 1.4 16 50-65 65-80 (237)
203 KOG0207 Cation transport ATPas 47.0 52 0.0011 38.9 7.2 72 221-341 726-797 (951)
204 PRK00192 mannosyl-3-phosphogly 46.6 16 0.00034 36.5 2.7 36 318-354 195-231 (273)
205 TIGR01664 DNA-3'-Pase DNA 3'-p 46.0 21 0.00045 33.3 3.3 16 47-62 12-27 (166)
206 PRK01158 phosphoglycolate phos 45.5 39 0.00085 32.3 5.2 36 220-255 22-57 (230)
207 TIGR01482 SPP-subfamily Sucros 45.3 34 0.00074 32.5 4.8 36 220-255 17-52 (225)
208 TIGR01680 Veg_Stor_Prot vegeta 44.9 40 0.00086 34.6 5.3 37 220-256 147-183 (275)
209 PF08282 Hydrolase_3: haloacid 44.3 37 0.00081 32.0 4.9 36 220-255 17-52 (254)
210 TIGR01662 HAD-SF-IIIA HAD-supe 44.3 12 0.00027 32.7 1.4 13 49-61 1-13 (132)
211 PRK08883 ribulose-phosphate 3- 44.2 33 0.00072 33.7 4.5 48 221-283 93-142 (220)
212 TIGR01487 SPP-like sucrose-pho 44.1 35 0.00077 32.5 4.7 36 219-254 19-54 (215)
213 TIGR01670 YrbI-phosphatas 3-de 43.0 12 0.00027 34.2 1.3 14 48-61 1-14 (154)
214 PF13344 Hydrolase_6: Haloacid 41.9 26 0.00056 30.0 3.0 33 51-86 1-33 (101)
215 PRK03669 mannosyl-3-phosphogly 40.2 44 0.00095 33.3 4.8 47 202-255 15-61 (271)
216 COG0036 Rpe Pentose-5-phosphat 40.1 55 0.0012 32.5 5.3 50 220-284 95-146 (220)
217 PRK09484 3-deoxy-D-manno-octul 39.9 14 0.00031 34.8 1.2 17 46-62 19-35 (183)
218 TIGR02245 HAD_IIID1 HAD-superf 39.8 35 0.00075 33.2 3.8 41 214-255 41-81 (195)
219 COG0560 SerB Phosphoserine pho 38.5 29 0.00064 33.8 3.2 16 46-61 3-18 (212)
220 TIGR00213 GmhB_yaeD D,D-heptos 38.5 31 0.00068 32.0 3.3 38 49-87 2-46 (176)
221 TIGR01524 ATPase-IIIB_Mg magne 38.5 41 0.0009 39.7 4.9 94 220-341 517-614 (867)
222 TIGR01681 HAD-SF-IIIC HAD-supe 38.5 17 0.00038 32.2 1.5 14 49-62 1-14 (128)
223 PRK12702 mannosyl-3-phosphogly 38.1 36 0.00077 35.4 3.8 37 48-87 1-38 (302)
224 TIGR02471 sucr_syn_bact_C sucr 37.9 33 0.00071 33.3 3.4 47 318-367 164-210 (236)
225 PF13304 AAA_21: AAA domain; P 36.2 21 0.00045 33.0 1.6 38 208-245 261-300 (303)
226 TIGR01486 HAD-SF-IIB-MPGP mann 36.0 77 0.0017 31.1 5.8 34 222-255 20-53 (256)
227 cd05014 SIS_Kpsf KpsF-like pro 36.0 45 0.00098 28.8 3.7 30 220-249 60-89 (128)
228 PRK08005 epimerase; Validated 35.6 64 0.0014 31.7 5.0 49 221-284 93-143 (210)
229 PRK10976 putative hydrolase; P 35.2 58 0.0012 32.0 4.7 36 220-255 21-56 (266)
230 PRK09552 mtnX 2-hydroxy-3-keto 35.1 20 0.00044 34.5 1.4 15 50-64 5-19 (219)
231 TIGR02826 RNR_activ_nrdG3 anae 34.5 51 0.0011 30.4 3.9 25 221-245 75-99 (147)
232 PF03767 Acid_phosphat_B: HAD 34.5 32 0.00069 34.0 2.7 38 218-255 115-152 (229)
233 PRK10530 pyridoxal phosphate ( 34.3 61 0.0013 31.7 4.7 36 220-255 22-57 (272)
234 PRK15126 thiamin pyrimidine py 34.1 62 0.0014 32.0 4.8 36 220-255 21-56 (272)
235 TIGR00099 Cof-subfamily Cof su 34.1 25 0.00053 34.5 1.9 34 318-352 193-226 (256)
236 KOG1618 Predicted phosphatase 33.9 59 0.0013 34.2 4.6 32 329-360 297-343 (389)
237 TIGR02461 osmo_MPG_phos mannos 33.8 66 0.0014 31.4 4.8 35 221-255 18-52 (225)
238 PRK09456 ?-D-glucose-1-phospha 33.8 31 0.00068 32.5 2.5 16 49-64 1-16 (199)
239 TIGR02137 HSK-PSP phosphoserin 33.6 21 0.00046 34.4 1.3 26 223-248 133-158 (203)
240 COG0647 NagD Predicted sugar p 33.0 27 0.00058 35.7 1.9 38 45-85 5-42 (269)
241 PRK12702 mannosyl-3-phosphogly 32.9 71 0.0015 33.2 5.0 42 212-255 14-55 (302)
242 TIGR01488 HAD-SF-IB Haloacid D 32.5 28 0.0006 31.6 1.8 14 51-64 2-15 (177)
243 TIGR01489 DKMTPPase-SF 2,3-dik 32.1 26 0.00057 32.0 1.6 15 50-64 3-17 (188)
244 KOG3111 D-ribulose-5-phosphate 31.4 63 0.0014 31.7 4.0 51 221-284 99-149 (224)
245 TIGR01484 HAD-SF-IIB HAD-super 31.1 27 0.0006 32.8 1.6 34 318-352 168-201 (204)
246 KOG1605 TFIIF-interacting CTD 30.8 10 0.00022 38.5 -1.4 43 212-255 125-167 (262)
247 cd05008 SIS_GlmS_GlmD_1 SIS (S 30.8 62 0.0013 27.9 3.7 31 220-250 59-89 (126)
248 PRK08745 ribulose-phosphate 3- 30.5 68 0.0015 31.7 4.3 49 221-284 97-147 (223)
249 PLN03008 Phospholipase D delta 29.9 44 0.00096 39.3 3.2 63 180-243 232-302 (868)
250 TIGR01517 ATPase-IIB_Ca plasma 29.7 1.2E+02 0.0026 36.3 6.8 97 220-343 581-681 (941)
251 PRK15122 magnesium-transportin 29.6 62 0.0013 38.5 4.5 93 221-341 553-649 (903)
252 TIGR01490 HAD-SF-IB-hyp1 HAD-s 29.5 32 0.00069 32.1 1.7 14 51-64 2-15 (202)
253 PF12710 HAD: haloacid dehalog 29.4 29 0.00063 31.8 1.4 16 326-341 172-187 (192)
254 PRK14502 bifunctional mannosyl 28.7 66 0.0014 37.1 4.3 43 41-85 409-451 (694)
255 TIGR01545 YfhB_g-proteo haloac 28.6 30 0.00064 33.6 1.3 17 47-63 4-20 (210)
256 TIGR00685 T6PP trehalose-phosp 28.3 32 0.00069 33.9 1.5 39 318-357 172-217 (244)
257 PRK10187 trehalose-6-phosphate 27.5 56 0.0012 32.8 3.2 50 202-253 22-72 (266)
258 TIGR01523 ATPase-IID_K-Na pota 26.5 80 0.0017 38.3 4.7 36 220-255 648-683 (1053)
259 TIGR01647 ATPase-IIIA_H plasma 26.4 60 0.0013 37.8 3.5 36 220-255 444-479 (755)
260 PRK10517 magnesium-transportin 26.1 91 0.002 37.2 5.0 94 220-341 552-649 (902)
261 PF03031 NIF: NLI interacting 26.1 36 0.00078 30.8 1.4 16 326-341 103-118 (159)
262 PRK08091 ribulose-phosphate 3- 25.9 1.8E+02 0.0039 29.0 6.3 49 221-284 103-155 (228)
263 PF01380 SIS: SIS domain SIS d 25.7 90 0.002 26.7 3.8 31 220-250 66-96 (131)
264 TIGR01485 SPP_plant-cyano sucr 25.7 1.3E+02 0.0029 29.3 5.4 35 220-254 23-57 (249)
265 PF09419 PGP_phosphatase: Mito 25.6 80 0.0017 30.0 3.6 37 43-80 36-73 (168)
266 PTZ00174 phosphomannomutase; P 25.6 1E+02 0.0023 30.2 4.7 33 220-252 24-56 (247)
267 PF08235 LNS2: LNS2 (Lipin/Ned 25.2 1.3E+02 0.0029 28.2 5.0 39 220-258 29-67 (157)
268 KOG3085 Predicted hydrolase (H 23.8 48 0.001 33.3 1.8 20 45-64 4-23 (237)
269 PF05240 APOBEC_C: APOBEC-like 23.7 55 0.0012 25.5 1.8 30 220-249 1-30 (55)
270 PF00571 CBS: CBS domain CBS d 23.5 1.2E+02 0.0026 22.1 3.6 39 208-246 3-41 (57)
271 TIGR00685 T6PP trehalose-phosp 23.4 65 0.0014 31.6 2.7 15 49-63 4-18 (244)
272 KOG2795 Catalytic subunit of t 23.3 53 0.0011 35.0 2.1 92 44-145 182-285 (372)
273 TIGR01656 Histidinol-ppas hist 23.1 45 0.00097 30.0 1.4 16 49-64 1-16 (147)
274 KOG2134 Polynucleotide kinase 22.9 42 0.0009 36.1 1.3 27 37-64 65-91 (422)
275 TIGR03127 RuMP_HxlB 6-phospho 22.9 97 0.0021 28.7 3.7 31 220-250 85-115 (179)
276 PF13086 AAA_11: AAA domain; P 22.8 2.4E+02 0.0052 26.1 6.4 16 324-339 212-227 (236)
277 PF11629 Mst1_SARAH: C termina 22.3 69 0.0015 24.4 2.0 21 1-21 24-44 (49)
278 TIGR01486 HAD-SF-IIB-MPGP mann 21.8 70 0.0015 31.4 2.6 36 318-354 181-218 (256)
279 PRK08942 D,D-heptose 1,7-bisph 21.7 55 0.0012 30.4 1.7 15 47-61 2-16 (181)
280 cd05710 SIS_1 A subgroup of th 21.7 1.2E+02 0.0025 26.5 3.7 31 220-250 60-90 (120)
281 TIGR01668 YqeG_hyp_ppase HAD s 21.6 94 0.002 28.8 3.3 40 44-86 21-62 (170)
282 cd05013 SIS_RpiR RpiR-like pro 20.8 1.2E+02 0.0025 26.0 3.6 26 221-246 74-99 (139)
283 cd05005 SIS_PHI Hexulose-6-pho 20.5 1.2E+02 0.0025 28.3 3.7 29 220-248 88-116 (179)
284 TIGR01663 PNK-3'Pase polynucle 20.4 73 0.0016 35.6 2.6 17 46-62 166-182 (526)
285 TIGR01494 ATPase_P-type ATPase 20.3 1.7E+02 0.0038 31.9 5.5 36 220-255 349-384 (499)
286 TIGR00441 gmhA phosphoheptose 20.0 1.5E+02 0.0032 27.1 4.2 27 220-246 92-118 (154)
No 1
>PF05761 5_nucleotid: 5' nucleotidase family; InterPro: IPR008380 This family includes a 5'-nucleotidase, 3.1.3.5 from EC, specific for purines (IMP and GMP) []. These enzymes are members of the Haloacid Dehalogenase (HAD) superfamily. HAD members are recognised by three short motifs {hhhhDxDx(T/V)}, {hhhh(T/S)}, and either {hhhh(D/E)(D/E)x(3-4)(G/N)} or {hhhh(G/N)(D/E)x(3-4)(D/E)} (where "h" stands for a hydrophobic residue). Crystal structures of many HAD enzymes has verified PSI-PRED predictions of secondary structural elements which show each of the "hhhh" sequences of the motifs as part of beta sheets. This subfamily of enzymes is part of "Subfamily I" of the HAD superfamily by virtue of a "cap" domain in between motifs 1 and 2. This subfamily's cap domain has a different predicted secondary structure than all other known HAD enzymes and thus has been designated "subfamily IG", the domain appears to consist of a mixed alpha/beta fold.; PDB: 2BDE_A 2XCW_A 2XCX_A 2XCV_A 2XJB_A 2JCM_A 2XJE_A 2J2C_A 2XJF_A 2XJD_A ....
Probab=100.00 E-value=1.1e-137 Score=1092.01 Aligned_cols=443 Identities=43% Similarity=0.771 Sum_probs=367.1
Q ss_pred eEEcccccCCCccEEEEecccccccccc-chHHHHHHHHHHHHHHhcCCCccccCCCCCCCCcccceeeecCCCeEEEec
Q 011157 37 IYVNKNLRLDNIQVYGFDYDYTLAHYSS-NLQSLIYDLAKEHMVNEFRYPEVCISFKYDPNFPIRGLYYDKQKGCLLKLD 115 (492)
Q Consensus 37 VF~nr~l~l~~i~~iGFDmDyTLa~Y~~-~~~~l~y~~~~~~LV~~~gYP~~ll~~~~d~~f~~RGLv~D~~~GnlLKvd 115 (492)
|||||+|+|++|+|||||||||||+|++ ++++|+|+.++++||+++|||++|++++|||+|++|||++|+++|||||||
T Consensus 1 VF~Nr~l~l~~i~~iGFDmDyTLa~Y~~~~~~~L~y~~~~~~LV~~~gYP~~ll~~~~dp~F~iRGL~~D~~~GnlLKld 80 (448)
T PF05761_consen 1 VFVNRSLNLKDIDVIGFDMDYTLARYKSPELEELIYELARERLVEEKGYPEELLNLEYDPDFAIRGLVIDKERGNLLKLD 80 (448)
T ss_dssp -EESS-EECCC--EEEE-TBTTTBEE-CCHHHHHHHHHHHHHHHHHTT--GGGGG----CCC--TTEEEETTTTEEEEEB
T ss_pred CeeCCccccccCCEEEECcccchhhcCHHHHHHHHHHHHHHHHHhccCCCHHHhCCCCchhhhhcceeeEcccCeEEEEc
Confidence 8999999999999999999999999985 999999999999999999999999999999999999999999999999999
Q ss_pred CCCceeecccccCCCCCCHHHHHHHhCCcccccCccCCccccccccchhHHHHHHHHHHHhh--hcCCCCChhhHHHHHH
Q 011157 116 FFGSIEPDGCYFGRRKLSRKEIAEIYGTRHIGRDQARGLVGLMDFFCFTEACLIADIVQYFV--DAKLEFDASYIYEDVN 193 (492)
Q Consensus 116 ~~g~I~~~~~~hG~~~ls~~ei~~~Y~~~~i~~~~~~~~~~l~dlF~lpe~~L~a~lvd~~~--~~~~~~~~~~l~~DV~ 193 (492)
++|+|++ |+||+++|+.+||.++||+++|+.+...+++.++|+|++||+||||++||+++ +.++.++|..||+||+
T Consensus 81 ~~g~I~~--a~hG~~~l~~eei~~~Y~~~~i~~~~~~~~~~l~tlFslpe~~L~a~lvd~~d~~~~~~~~~~~~l~~DV~ 158 (448)
T PF05761_consen 81 RFGYILR--AYHGFRPLSDEEIRELYGNKFIPLSDDSRFFQLNTLFSLPEAYLFAQLVDYFDVEDGNIEYDYRSLYQDVR 158 (448)
T ss_dssp TTSBEEE--EEETTEEE-HHHHCCCCTTSB--TTSTTTEEEE-SCCHHHHHHHHHHHHHHHHECCTTCCEEHHHHHHHHH
T ss_pred CCCcEEE--EEeccccCCHHHHHHhcCCcccccchhhHHHHHhhHhhhhHHHHHHHHHHHhhcccCCCCCCHHHHHHHHH
Confidence 9999996 79999999999999999999999877668999999999999999999999999 7778899999999999
Q ss_pred HHHHHhhhhhhhHHHHhcCccchhccchhHHHHHHHHHHcCCeEEEEeCCChHHHHHhhhhhhccCCCCCCCcCCCccEE
Q 011157 194 RAIQHVHRRGLVHRGILSDPNRYLVKNGQVLQFVKMLREKGKKLFLLTNSPYYFVDGGMRFMLEDSTGYTDSWRELFDVV 273 (492)
Q Consensus 194 ~av~~vh~~G~lk~~v~~np~kYi~k~p~l~~~L~~Lk~~GkklfL~TNS~~~y~~~vm~~l~~~~~~~g~~w~~yFD~i 273 (492)
+||++||.+|.+|++|++||+|||+|+|.++.||++||++|||+||+|||+|+||+.+|+|+++..++.+.+|++|||+|
T Consensus 159 ~Avd~~H~~G~lk~~v~~dp~kYi~k~~~l~~~L~~lr~~GKklFLiTNS~~~yt~~~M~yl~g~~~~~~~dW~dlFDvV 238 (448)
T PF05761_consen 159 DAVDHVHRDGSLKREVKEDPEKYIHKDPKLPPWLERLRSAGKKLFLITNSPFDYTNAVMSYLLGPFLGEDPDWRDLFDVV 238 (448)
T ss_dssp HHHHHHHHCSCHHHHHHTTCCCCEE--CHHHHHHHHHHCCT-EEEEE-SS-HHHHHHHHHHHCGCCSSTTT-GGGCECEE
T ss_pred HHHHHHhcchHHHHHHHHCHHHHccCCchHHHHHHHHHhcCceEEEecCCCCchhhhhhhhccCCCCCCCCChhhheeEE
Confidence 99999999999999999999999999999999999999999999999999999999999999999888889999999999
Q ss_pred EEcCCCCCCCCCCCCccccccCcCcccccc-ccccCCCeeeccCCHHHHHHHhCCCCCcEEEEccccccccccccc-CCc
Q 011157 274 IAQANKPDFYTSDHPFRCYDTEKDTLAFTK-VDAFIPNKIYYHGCLKSFLQITKWNGPEVIYFGDHLFSDLRGPSK-AGW 351 (492)
Q Consensus 274 I~~a~KP~FF~~~~pfr~vd~~~gk~~~~~-~~~l~~~~vY~~G~~~~~~~~lg~~~~~vLyvGDhi~gDI~~ak~-~Gw 351 (492)
||+|+||.||++++|||+||+++|++.+++ ++++++|+||+|||++++++++||+|++||||||||+|||+.+|+ +||
T Consensus 239 Iv~A~KP~FF~~~~pfr~vd~~~g~l~~~~~~~~l~~g~vY~gGn~~~l~~ll~~~g~~VLY~GDhi~~Di~~~k~~~gW 318 (448)
T PF05761_consen 239 IVDARKPGFFTEGRPFREVDTETGKLKWGKYVGPLEKGKVYSGGNWDQLHKLLGWRGKEVLYFGDHIYGDILKSKKRHGW 318 (448)
T ss_dssp EES--CCHHHCT---EEEEETTTSSEECS---SS--TC-EEEE--HHHHHHHCT--GGGEEEEESSTTTTHHHHHHHH-S
T ss_pred EEcCCCCcccCCCCceEEEECCCCccccccccccccCCCEeecCCHHHHHHHHccCCCeEEEECCchhhhhhhhccccce
Confidence 999999999999999999999999999988 899999999999999999999999999999999999999988765 799
Q ss_pred EEEEEeccchhHHHHhhchhhHHHHHHHHHHHHHHHHHhhhhhcccccHHHHHHHHHHHHHHHHHHHHHhhhhccccccc
Q 011157 352 RTAAIIHELESEIRIQNDETYRFEQAKFHIIQELLGKLHATVANSQRTEACQLLLAELNEERQKARRMMKKMFNKSFGAT 431 (492)
Q Consensus 352 rT~~VvpEl~~Ei~~~~~~~~~~~~~~l~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~fn~~~Gsl 431 (492)
||+||||||++||++|++++++.++ |+.|+.++++++.......+.++.+..+++|+++|++++.+|+++||++|||+
T Consensus 319 rT~~Ii~ELe~Ei~~~~~~~~~~~~--l~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~fn~~~Gsl 396 (448)
T PF05761_consen 319 RTAAIIPELEQEIEIWNSKKYRFEE--LQELEELLEELQDHLDQLRSSSELRPDISELRKERRELRREMKELFNPQFGSL 396 (448)
T ss_dssp EEEEE-TTHHHHHHHHHHTHHHHHH--HHHHHHHCHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCTT-TTT-BS
T ss_pred EEEEEehhhhhhhhhhhhcchhhhH--HHHHHHHHHHHHHHhcccccchhhHHHHHHHHHHHHHHHHHHhhhcccchHHH
Confidence 9999999999999999998887765 78888888888765433335567788899999999999999999999999999
Q ss_pred ccCCCCCcchhhhhhccccccccccccccccCCCCccccCCCCcCCCCCCCCccC
Q 011157 432 FLTDTGQESAFAYHIHRYADVYTSKAENFLLYPPEAWLHVPFDIKIMPHHVKVPS 486 (492)
Q Consensus 432 Frt~~~~~S~Fa~qv~ryAdlYtS~v~Nll~y~~~~~fr~~~~~~~mpHe~~~~~ 486 (492)
|||++ ++|+||+||+||||||||+|+||++|||+++||||+ .+||||++|++
T Consensus 397 fRtg~-~~s~Fa~qv~RyAdlYtS~v~Nll~y~~~~~Fr~~~--~~lpHE~~~~~ 448 (448)
T PF05761_consen 397 FRTGH-NPSYFARQVERYADLYTSSVSNLLNYSPNYYFRPPR--DLLPHESTVWH 448 (448)
T ss_dssp SEETT-EEBHHHHHHHHH-SEEESSHHHHHHS-TT-EE---------CCG-----
T ss_pred HhcCC-CccHHHHHHHHHhhhhhccccHHHhCCcceEEeCCC--CCCCCCCCCCC
Confidence 99974 699999999999999999999999999999999997 59999998864
No 2
>KOG2470 consensus Similar to IMP-GMP specific 5'-nucleotidase [Nucleotide transport and metabolism]
Probab=100.00 E-value=2.5e-124 Score=933.67 Aligned_cols=467 Identities=56% Similarity=0.952 Sum_probs=450.5
Q ss_pred ChHHHHHHHHHHHHHHhhcccCchhhhcCCCCCCCeeEEcccccCCCccEEEEeccccccccccchHHHHHHHHHHHHHH
Q 011157 1 MDDEIAKIRQEFNAAKQSFLKIPEALKEMPKMNPEGIYVNKNLRLDNIQVYGFDYDYTLAHYSSNLQSLIYDLAKEHMVN 80 (492)
Q Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~VF~nr~l~l~~i~~iGFDmDyTLa~Y~~~~~~l~y~~~~~~LV~ 80 (492)
+++++.+++-|++.++|-+..+|++++++ .+|+.||+|++++|++|+++|||+|||||+|+.++..+||+.+.+.||+
T Consensus 20 ~~~e~t~~~he~~~~~~r~l~ip~~i~sl--lnp~aiy~nne~sl~dievygfdydytla~ys~hlh~lif~~ard~lvn 97 (510)
T KOG2470|consen 20 VEDEITKIRHEFELAKQRFLNIPEAINSL--LNPQAIYVNNELSLDDIEVYGFDYDYTLAHYSSHLHSLIFDLARDHLVN 97 (510)
T ss_pred chHHHHHHhhhhhhccccccCCCHHHHhc--cChhheeecCcccccceeEeccccchhHHHHHHHHHHHHHHHHHHHHHH
Confidence 36889999999999999999999999996 9999999999999999999999999999999999999999999999999
Q ss_pred hcCCCccccCCCCCCCCcccceeeecCCCeEEEecCCCceeecccccCCCCCCHHHHHHHhCCcccccCc-------cCC
Q 011157 81 EFRYPEVCISFKYDPNFPIRGLYYDKQKGCLLKLDFFGSIEPDGCYFGRRKLSRKEIAEIYGTRHIGRDQ-------ARG 153 (492)
Q Consensus 81 ~~gYP~~ll~~~~d~~f~~RGLv~D~~~GnlLKvd~~g~I~~~~~~hG~~~ls~~ei~~~Y~~~~i~~~~-------~~~ 153 (492)
++.||+.|.+++|||+|+||||++|+++|.|+|+|++++|+.++||+|.++++++||.++||+++|+.+. ..+
T Consensus 98 ~frYPe~i~q~eYdPnFaIRGLhYDv~kglLmKlDaF~~iqlgt~YrGr~kv~~eEvi~mY~~rhipl~q~~g~~~k~~~ 177 (510)
T KOG2470|consen 98 EFRYPEVIRQYEYDPNFAIRGLHYDVQKGLLMKLDAFHYIQLGTVYRGRRKVPDEEVIEMYGGRHIPLDQMSGFYGKGSK 177 (510)
T ss_pred hccChHHhhhcccCCCcccchhhhHhhhhhheeeccceeeccCceeecCccCCHHHHHHHhcCCccCHHHhcCccCCCch
Confidence 9999999999999999999999999999999999999999999999999999999999999999998753 234
Q ss_pred ccccccccchhHHHHHHHHHHHhhhcCCCCChhhHHHHHHHHHHHhhhhhhhHHHHhcCccchhccchhHHHHHHHHHHc
Q 011157 154 LVGLMDFFCFTEACLIADIVQYFVDAKLEFDASYIYEDVNRAIQHVHRRGLVHRGILSDPNRYLVKNGQVLQFVKMLREK 233 (492)
Q Consensus 154 ~~~l~dlF~lpe~~L~a~lvd~~~~~~~~~~~~~l~~DV~~av~~vh~~G~lk~~v~~np~kYi~k~p~l~~~L~~Lk~~ 233 (492)
+.+++|+||+||+||++|+|+||.++.+++++..+|+||..|+..||..|.+ +|.+|.+|||...|.+..+|++|+.+
T Consensus 178 mvqlmDiFs~pEmcLls~vveYF~~~~lefd~~~ly~Dv~~ai~~vH~~~~~--~i~~~~ekyi~r~~ql~~fl~kL~~~ 255 (510)
T KOG2470|consen 178 MVQLMDIFSLPEMCLLSCVVEYFLDNKLEFDPSHLYKDVNDAIRDVHRKGHM--KIESDLEKYIERNPQLLAFLRKLKDH 255 (510)
T ss_pred HHHHHHHhccHHHHHHHHHHHHHHhccccCCHHHHHHhHHHHHHHhhhhhhH--HHhhchHHHhhccHHHHHHHHHHHHh
Confidence 7899999999999999999999999999999999999999999999999998 89999999999999999999999999
Q ss_pred CCeEEEEeCCChHHHHHhhhhhhccCCCCCCCcCCCccEEEEcCCCCCCCCCC-CCccccccCcCccccccccccCCCee
Q 011157 234 GKKLFLLTNSPYYFVDGGMRFMLEDSTGYTDSWRELFDVVIAQANKPDFYTSD-HPFRCYDTEKDTLAFTKVDAFIPNKI 312 (492)
Q Consensus 234 GkklfL~TNS~~~y~~~vm~~l~~~~~~~g~~w~~yFD~iI~~a~KP~FF~~~-~pfr~vd~~~gk~~~~~~~~l~~~~v 312 (492)
|||+||+||||+.||+.+|+|+. |.+||++|||||+.|+||.||++. +|||.+|.++|.+.|.+|.+|++|+|
T Consensus 256 GKklFLiTNSPysFVd~GM~flv------G~~WRdlFDVVIvqA~KP~Fftde~rPfR~~dek~~sl~wdkv~klekgki 329 (510)
T KOG2470|consen 256 GKKLFLITNSPYSFVDKGMRFLV------GDDWRDLFDVVIVQANKPEFFTDERRPFRKYDEKRGSLLWDKVDKLEKGKI 329 (510)
T ss_pred cCcEEEEeCCchhhhhcCceeee------CccHHhhhheeEEecCCCcccccccCcchhhcccccchhhhhhhhcccCce
Confidence 99999999999999999999998 899999999999999999999975 59999999999999999999999999
Q ss_pred eccCCHHHHHHHhCCCCCcEEEEcccccccccccc-cCCcEEEEEeccchhHHHHhhchhhHHHHHHHHHHHHHHHHHhh
Q 011157 313 YYHGCLKSFLQITKWNGPEVIYFGDHLFSDLRGPS-KAGWRTAAIIHELESEIRIQNDETYRFEQAKFHIIQELLGKLHA 391 (492)
Q Consensus 313 Y~~G~~~~~~~~lg~~~~~vLyvGDhi~gDI~~ak-~~GwrT~~VvpEl~~Ei~~~~~~~~~~~~~~l~~l~~l~~~~~~ 391 (492)
|.+||+.++++++||.|++|||||||+|+|++... ++||||.||||||++||.++|++.|+++++|++.|+.|++++|.
T Consensus 330 Yy~G~l~~flelt~WrG~~VlYFGDHlySDLad~tlkhgWRTgAII~EL~~Eiki~N~e~y~~s~~w~q~lt~Ller~q~ 409 (510)
T KOG2470|consen 330 YYQGNLKSFLELTGWRGPRVLYFGDHLYSDLADLTLKHGWRTGAIIPELEREIKIQNTEQYRFSQTWLQILTGLLERMQA 409 (510)
T ss_pred eeeccHHHHHHHhccCCCeeEEecCcchhhhhhhHhhcccccccchHHHHHHHhhccHHHHHHHHHHHHHHHHHHHHHHh
Confidence 99999999999999999999999999999998876 89999999999999999999999999999999999999999975
Q ss_pred hhhcccccHHHHHHHHHHHHHHHHHHHHHhhhhcccccccccCCCCCcchhhhhhccccccccccccccccCCCCccccC
Q 011157 392 TVANSQRTEACQLLLAELNEERQKARRMMKKMFNKSFGATFLTDTGQESAFAYHIHRYADVYTSKAENFLLYPPEAWLHV 471 (492)
Q Consensus 392 ~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~fn~~~GslFrt~~~~~S~Fa~qv~ryAdlYtS~v~Nll~y~~~~~fr~ 471 (492)
.++++++.++++|.+||+++|..++++||.+|||+|||.+| ||+|++++.||||||||+++|||+|.+.|+|++
T Consensus 410 -----~rseasq~~L~ew~~eRq~lR~~tK~~FN~qFGs~FrT~~n-ptyFsrrl~rfaDiYts~lsnlL~y~~~htfYp 483 (510)
T KOG2470|consen 410 -----QRSEASQSVLDEWMKERQELRDTTKQMFNAQFGSTFRTDHN-PTYFSRRLHRFADIYTSSLSNLLNYRVEHTFYP 483 (510)
T ss_pred -----hhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcceeeccCC-ccHHHHHHHHHHHHHhccHHHHHhcCcccccCC
Confidence 45678899999999999999999999999999999999997 999999999999999999999999999999998
Q ss_pred CCCcCCCCCCCCcc
Q 011157 472 PFDIKIMPHHVKVP 485 (492)
Q Consensus 472 ~~~~~~mpHe~~~~ 485 (492)
++ +.||||..+.
T Consensus 484 rr--~~mpHe~~~~ 495 (510)
T KOG2470|consen 484 RR--TPMPHEVPVW 495 (510)
T ss_pred cC--CCCccccccc
Confidence 75 7999998764
No 3
>TIGR02244 HAD-IG-Ncltidse HAD superfamily (subfamily IG) hydrolase, 5'-nucleotidase. A TIGRFAMs model (TIGR01993) represents a (putative) family of _pyrimidine_ 5'-nucleotidases which are also subfamily I HAD's, which should not be confused with the current model.
Probab=100.00 E-value=1.3e-101 Score=792.64 Aligned_cols=331 Identities=49% Similarity=0.889 Sum_probs=317.8
Q ss_pred eEEcccccCCCccEEEEecccccccccc-chHHHHHHHHHHHHHHhcCCCccccCCCCCCCCcccceeeecCCCeEEEec
Q 011157 37 IYVNKNLRLDNIQVYGFDYDYTLAHYSS-NLQSLIYDLAKEHMVNEFRYPEVCISFKYDPNFPIRGLYYDKQKGCLLKLD 115 (492)
Q Consensus 37 VF~nr~l~l~~i~~iGFDmDyTLa~Y~~-~~~~l~y~~~~~~LV~~~gYP~~ll~~~~d~~f~~RGLv~D~~~GnlLKvd 115 (492)
|||||+|+|++|++||||||||||+|++ +++.|||++++++||+.+|||++|++++|||+|++|||++|+++|||||+|
T Consensus 1 if~nr~l~l~~i~~~GFDmDyTLa~Y~~~~~e~L~y~~~~~~LV~~~gYp~~l~~~~~d~~f~iRGL~~D~~~GnllKld 80 (343)
T TIGR02244 1 VFVNRELNLEKIQVFGFDMDYTLAQYKSPELEALIYDLAKERLVKRFGYPEELLSFAYDPTFAIRGLVFDKLKGNLLKLD 80 (343)
T ss_pred CeeCCccccccCCEEEECccccccccChHHHHHHHHHHHHHHHHHhcCCChHHhCCcCCCcccccceeeEcccCeEEEEc
Confidence 7999999999999999999999999985 999999999999999989999999999999999999999999999999999
Q ss_pred CCCceeecccccCCCCCCHHHHHHHhCCcccccCccCCccccccccchhHHHHHHHHHHHhhhc---CCCCChhhHHHHH
Q 011157 116 FFGSIEPDGCYFGRRKLSRKEIAEIYGTRHIGRDQARGLVGLMDFFCFTEACLIADIVQYFVDA---KLEFDASYIYEDV 192 (492)
Q Consensus 116 ~~g~I~~~~~~hG~~~ls~~ei~~~Y~~~~i~~~~~~~~~~l~dlF~lpe~~L~a~lvd~~~~~---~~~~~~~~l~~DV 192 (492)
++|+|++ |+||+++||.+|+.++||+++++.++..+++.++|+|++||+|||||+||++++. +..++|.+||+||
T Consensus 81 ~~g~I~~--~~hG~~~l~~~e~~~~Y~~~~~~~~~~~~~~~l~tlF~lpe~~L~a~lvd~~~~~~~~~~~~~~~~~~~dv 158 (343)
T TIGR02244 81 RFGNILR--GYHGLRPLSDKEVQEIYGNKYISRSNGDRYYLLDTLFSLPEACLIAQLVDYFDDHPKGPLAFDYRQIYQDV 158 (343)
T ss_pred CCCcEEE--EecCCccCCHHHHHHHcCccccCCCCCccEEEecccccchHHHHHHHHHHHHhccccCCCCCCHHHHHHHH
Confidence 9999998 5799999999999999999999887766899999999999999999999999977 6778999999999
Q ss_pred HHHHHHhhhhhhhHHHHhcCccchhccchhHHHHHHHHHHcCCeEEEEeCCChHHHHHhhhhhhccCCCCCCCcCCCccE
Q 011157 193 NRAIQHVHRRGLVHRGILSDPNRYLVKNGQVLQFVKMLREKGKKLFLLTNSPYYFVDGGMRFMLEDSTGYTDSWRELFDV 272 (492)
Q Consensus 193 ~~av~~vh~~G~lk~~v~~np~kYi~k~p~l~~~L~~Lk~~GkklfL~TNS~~~y~~~vm~~l~~~~~~~g~~w~~yFD~ 272 (492)
++||++||.+|.||++|++||++||+++|++.++|++||++|+|+||+|||+++|++.+|+++++.++ .+.+|++|||+
T Consensus 159 ~~av~~~h~~g~lk~~v~~dp~~yv~~~pgl~elL~~Lr~~G~klfLvTNS~~~yt~~im~~l~g~~~-~~~~w~~yFD~ 237 (343)
T TIGR02244 159 RDALDWVHRKGSLKKKVMENPEKYVLRDPKLPLFLSKLKEHGKKLFLLTNSDYDYTDKGMKYLLGPFL-GEHDWRDYFDV 237 (343)
T ss_pred HHHHHHhcccchHHHHHHHCHHHHhccchhHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHhhCCcc-cccchHhhCcE
Confidence 99999999999999999999999999999999999999999999999999999999999999876555 56899999999
Q ss_pred EEEcCCCCCCCCCCCCccccccCcCccccccccccCCCeeeccCCHHHHHHHhCCCCCcEEEEcccccccccccc-cCCc
Q 011157 273 VIAQANKPDFYTSDHPFRCYDTEKDTLAFTKVDAFIPNKIYYHGCLKSFLQITKWNGPEVIYFGDHLFSDLRGPS-KAGW 351 (492)
Q Consensus 273 iI~~a~KP~FF~~~~pfr~vd~~~gk~~~~~~~~l~~~~vY~~G~~~~~~~~lg~~~~~vLyvGDhi~gDI~~ak-~~Gw 351 (492)
||++|+||.||++++|||+||+++|.+.++.+..+++|+||+|||+.++++.+|+++++||||||||++||.+|| .+||
T Consensus 238 IIt~a~KP~FF~~~~pf~~v~~~~g~~~~~~~~~l~~g~vY~gGn~~~~~~~l~~~~~~vlYvGD~i~~Di~~~kk~~Gw 317 (343)
T TIGR02244 238 VIVDARKPGFFTEGRPFRQVDVETGSLKWGEVDGLEPGKVYSGGSLKQFHELLKWRGKEVLYFGDHIYGDLLRSKKKRGW 317 (343)
T ss_pred EEeCCCCCcccCCCCceEEEeCCCCcccCCccccccCCCeEeCCCHHHHHHHHCCCCCcEEEECCcchHHHHhhHHhcCc
Confidence 999999999999999999999999999998888899999999999999999999999999999999999999887 7999
Q ss_pred EEEEEeccchhHHHHhhch
Q 011157 352 RTAAIIHELESEIRIQNDE 370 (492)
Q Consensus 352 rT~~VvpEl~~Ei~~~~~~ 370 (492)
+|++|+|||+.|+++|.+.
T Consensus 318 ~TvlI~pEL~~E~~~~~~~ 336 (343)
T TIGR02244 318 RTAAIIPELEQEVGILTNS 336 (343)
T ss_pred EEEEEchhHHHHHHHHhhc
Confidence 9999999999999999553
No 4
>KOG2469 consensus IMP-GMP specific 5'-nucleotidase [Nucleotide transport and metabolism]
Probab=100.00 E-value=2.7e-91 Score=712.11 Aligned_cols=408 Identities=33% Similarity=0.535 Sum_probs=359.4
Q ss_pred CCCCCeeEEcccccCCCccEEEEeccccccccc-cchHHHHHHHHHHHHHHhcCCCccccCCCCCCCCcccceeeecCCC
Q 011157 31 KMNPEGIYVNKNLRLDNIQVYGFDYDYTLAHYS-SNLQSLIYDLAKEHMVNEFRYPEVCISFKYDPNFPIRGLYYDKQKG 109 (492)
Q Consensus 31 ~~~~~~VF~nr~l~l~~i~~iGFDmDyTLa~Y~-~~~~~l~y~~~~~~LV~~~gYP~~ll~~~~d~~f~~RGLv~D~~~G 109 (492)
+..+++|||||+|+|++|.+|||||||||++|+ ++++.|+|+ ++.+++...|||.+++.+.+||+|++|||++|..+|
T Consensus 10 r~~~~~if~~rsl~l~~i~~~GfdmDyTL~~Y~~~~~esLay~-~~~~~l~~~Gyp~~ll~~~~d~~f~~rGL~ld~~~G 88 (424)
T KOG2469|consen 10 RDVPHRIFCNRSLNLENIGIVGFDMDYTLARYNLPEMESLAYD-LAQFLLKDKGYPNELLSTSFDWNFPCRGLVLDKERG 88 (424)
T ss_pred cccchheehhhhhhhhcCcEEeeccccchhhhcccchHHHHHH-HHHHHHHhcCChhhhhccccCccceeeeeEEeccCC
Confidence 445788999999999999999999999999997 699999999 555555569999999999999999999999999999
Q ss_pred eEEEecCCCceeecccccCCCCCCHHHHHHHhCCcccccCccCCccccccccchhHHHHHHHHHHHhhhcCC----CCCh
Q 011157 110 CLLKLDFFGSIEPDGCYFGRRKLSRKEIAEIYGTRHIGRDQARGLVGLMDFFCFTEACLIADIVQYFVDAKL----EFDA 185 (492)
Q Consensus 110 nlLKvd~~g~I~~~~~~hG~~~ls~~ei~~~Y~~~~i~~~~~~~~~~l~dlF~lpe~~L~a~lvd~~~~~~~----~~~~ 185 (492)
|+||+|++|+|++ |.||++++|.+|+.++||++.++..+ .+++.++|+|++||+.++||+||+++++.. .+++
T Consensus 89 N~lKld~~~~vl~--a~hg~rfls~~~~~eiyg~~~~~~~~-~~~~~l~t~F~~~ea~~~aq~vd~~d~~~~~~~~~~dy 165 (424)
T KOG2469|consen 89 NLLKLDRFGYVLR--AAHGTRFLSNEEISEIYGRKLVRLSD-SRYYLLNTLFSMPEADLFAQAVDFLDNGPEYGPVDMDY 165 (424)
T ss_pred ceeeeeccCceee--eccccccccccchhhhcccccccccC-chhhhhhhhhhchhHHHHHhhcchhhcCCccCccchhh
Confidence 9999999999998 47999999999999999999988877 678899999999999999999999886643 3477
Q ss_pred hhHHHHHHHHHHHhhhhhhhHHHHhcCccchhccchhHHHHHHHHHHcCCeEEEEeCCChHHHHHhhhhhhccCCCCCCC
Q 011157 186 SYIYEDVNRAIQHVHRRGLVHRGILSDPNRYLVKNGQVLQFVKMLREKGKKLFLLTNSPYYFVDGGMRFMLEDSTGYTDS 265 (492)
Q Consensus 186 ~~l~~DV~~av~~vh~~G~lk~~v~~np~kYi~k~p~l~~~L~~Lk~~GkklfL~TNS~~~y~~~vm~~l~~~~~~~g~~ 265 (492)
..+|+||++|++++|.+|.+|+.|+++|++||++++.++.||.++|++|||+||+|||+|+|++.+|++++ |.+
T Consensus 166 k~~~~~v~~~~~~~h~~~~lk~~~~~~pek~V~~d~~~v~~l~~~r~sGKk~fl~Tns~~~ytd~~mt~~~------~~d 239 (424)
T KOG2469|consen 166 KPGWKDVRAAGNAVHLYGLLKKKMMGKPERYVVYDGTIVPLLSMLRDSGKKTFLHTNSDWDYTDIFMAFHY------GFD 239 (424)
T ss_pred cchHHHHHHHHhHHHHHHHHHHHHhcCCCceeeecCccccchHHHHhhccceEEeeccccchhhHHHHHHh------CCC
Confidence 88999999999999999999999999999999999999999999999999999999999999999999998 689
Q ss_pred cCCCccEEEEcCCCCCCCCCCCCccccccCcCccccc-cccccCCCeeeccCCHHHHHHHhCCCCCcEEEEccccccccc
Q 011157 266 WRELFDVVIAQANKPDFYTSDHPFRCYDTEKDTLAFT-KVDAFIPNKIYYHGCLKSFLQITKWNGPEVIYFGDHLFSDLR 344 (492)
Q Consensus 266 w~~yFD~iI~~a~KP~FF~~~~pfr~vd~~~gk~~~~-~~~~l~~~~vY~~G~~~~~~~~lg~~~~~vLyvGDhi~gDI~ 344 (492)
|+.|||+|++.|+||+||.++.++|+|++++|+++.+ ..++++++.+|+||+++.+++.+++.|.++||+||||+|||+
T Consensus 240 W~~yfd~v~~~a~Kp~ff~e~~vlreV~t~~g~l~~g~~~~p~e~~~~ySggs~~~~~~~l~~~g~diLy~gdHi~~dvl 319 (424)
T KOG2469|consen 240 WETYFDLVETRAAKPGFFHEGTVLREVEPQEGLLKNGDNTGPLEQGGVYSGGSLKTVETSMKVKGKDILYGGDHIWGDVL 319 (424)
T ss_pred cceeEEEEEEeccCCccccccceeeeeccccccccccccCCcchhcccCCcchHHHHHHHhcccccceeecccceeeeEE
Confidence 9999999999999999999999999999999999874 467899999999999999999999999999999999999997
Q ss_pred cc-ccCCcEEEEEeccchhHHHHhhchhhHHHHHHHHHHHHHHHHHhhhhhcccccHHHHHHHHHHHHHHHHHHHHHhhh
Q 011157 345 GP-SKAGWRTAAIIHELESEIRIQNDETYRFEQAKFHIIQELLGKLHATVANSQRTEACQLLLAELNEERQKARRMMKKM 423 (492)
Q Consensus 345 ~a-k~~GwrT~~VvpEl~~Ei~~~~~~~~~~~~~~l~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~ 423 (492)
.+ |+.||||++|+|||+.|..+|...+.++++ +......+++++.++..+..+ ...+...++++++++..|++
T Consensus 320 ~skk~~~wrt~lv~peL~~e~~v~~~~ke~~~e--l~~~~~~laDiy~~l~~s~~s---~~~~~~~~r~~~~~~~~~dk- 393 (424)
T KOG2469|consen 320 VSKKRRGWRTVLVAPELEREDLVLLDSKEEFIE--LLNWSSKLADIYPNLDLSLLS---APKDLSIKRDIQKLTECMDK- 393 (424)
T ss_pred ecceecceEEEEEehhhhhhhhhhccchHHHHH--HhccchhhHhhccCCchhhhh---cccccchhHHHHHHHHhHHH-
Confidence 65 568999999999999999999987633332 334455566666554322211 11123345555566666655
Q ss_pred hcccccccccCCCCCcchhhhhhccccccccc
Q 011157 424 FNKSFGATFLTDTGQESAFAYHIHRYADVYTS 455 (492)
Q Consensus 424 fn~~~GslFrt~~~~~S~Fa~qv~ryAdlYtS 455 (492)
++..|||+|||+ +|.|.||.|++||||+|||
T Consensus 394 ~~~~~~sl~~s~-~~~t~~a~q~~r~A~~y~s 424 (424)
T KOG2469|consen 394 FYGVWGSLFRTG-YQRTRFALQVERYADLYTS 424 (424)
T ss_pred HhcchHHhhccc-cccchHHHHHHHHHHHhcC
Confidence 557999999998 6899999999999999997
No 5
>TIGR02253 CTE7 HAD superfamily (subfamily IA) hydrolase, TIGR02253. This family is a member of the haloacid dehalogenase (HAD) superfamily of hydrolases which are characterized by three conserved sequence motifs. By virtue of an alpha helical domain in-between the first and second conserved motif, this family is a member of subfamily IA (TIGR01549).
Probab=99.68 E-value=3.8e-16 Score=149.88 Aligned_cols=106 Identities=25% Similarity=0.315 Sum_probs=93.0
Q ss_pred hhccchhHHHHHHHHHHcCCeEEEEeCCChHHHHHhhhhhhccCCCCCCCcCCCccEEEEcCCCCCCCCCCCCccccccC
Q 011157 216 YLVKNGQVLQFVKMLREKGKKLFLLTNSPYYFVDGGMRFMLEDSTGYTDSWRELFDVVIAQANKPDFYTSDHPFRCYDTE 295 (492)
Q Consensus 216 Yi~k~p~l~~~L~~Lk~~GkklfL~TNS~~~y~~~vm~~l~~~~~~~g~~w~~yFD~iI~~a~KP~FF~~~~pfr~vd~~ 295 (492)
++...|++.++|+.|+++|++++|+||++...+...++.+ +|.+|||.|++++ ++.
T Consensus 92 ~~~~~~g~~~~L~~L~~~g~~~~i~Tn~~~~~~~~~l~~~---------~l~~~f~~i~~~~---------------~~~ 147 (221)
T TIGR02253 92 YLRVYPGVRDTLMELRESGYRLGIITDGLPVKQWEKLERL---------GVRDFFDAVITSE---------------EEG 147 (221)
T ss_pred hCCCCCCHHHHHHHHHHCCCEEEEEeCCchHHHHHHHHhC---------ChHHhccEEEEec---------------cCC
Confidence 4667899999999999999999999999999998888873 8999999999887 444
Q ss_pred cCccccccccccCCCeeeccCCHHHHHHHhCCCCCcEEEEcccccccccccccCCcEEEEEecc
Q 011157 296 KDTLAFTKVDAFIPNKIYYHGCLKSFLQITKWNGPEVIYFGDHLFSDLRGPSKAGWRTAAIIHE 359 (492)
Q Consensus 296 ~gk~~~~~~~~l~~~~vY~~G~~~~~~~~lg~~~~~vLyvGDhi~gDI~~ak~~GwrT~~VvpE 359 (492)
.+||+ |++|.. +++.+|+++++|+||||++..||.+|+++||+|++|...
T Consensus 148 ~~KP~---------~~~~~~-----~~~~~~~~~~~~~~igDs~~~di~~A~~aG~~~i~~~~~ 197 (221)
T TIGR02253 148 VEKPH---------PKIFYA-----ALKRLGVKPEEAVMVGDRLDKDIKGAKNLGMKTVWINQG 197 (221)
T ss_pred CCCCC---------HHHHHH-----HHHHcCCChhhEEEECCChHHHHHHHHHCCCEEEEECCC
Confidence 45665 677766 999999999999999999988899999999999999653
No 6
>PLN02770 haloacid dehalogenase-like hydrolase family protein
Probab=99.63 E-value=4e-15 Score=147.02 Aligned_cols=103 Identities=18% Similarity=0.279 Sum_probs=91.9
Q ss_pred hccchhHHHHHHHHHHcCCeEEEEeCCChHHHHHhhhhhhccCCCCCCCcCCCccEEEEcCCCCCCCCCCCCccccccCc
Q 011157 217 LVKNGQVLQFVKMLREKGKKLFLLTNSPYYFVDGGMRFMLEDSTGYTDSWRELFDVVIAQANKPDFYTSDHPFRCYDTEK 296 (492)
Q Consensus 217 i~k~p~l~~~L~~Lk~~GkklfL~TNS~~~y~~~vm~~l~~~~~~~g~~w~~yFD~iI~~a~KP~FF~~~~pfr~vd~~~ 296 (492)
+..-|++.++|+.|++.|++++|+||++...++..++.+ +|.+|||.|+++. |+..
T Consensus 107 ~~l~pgv~e~L~~L~~~g~~l~I~Tn~~~~~~~~~l~~~---------gl~~~Fd~iv~~~---------------~~~~ 162 (248)
T PLN02770 107 LKPLNGLYKLKKWIEDRGLKRAAVTNAPRENAELMISLL---------GLSDFFQAVIIGS---------------ECEH 162 (248)
T ss_pred CCcCccHHHHHHHHHHcCCeEEEEeCCCHHHHHHHHHHc---------CChhhCcEEEecC---------------cCCC
Confidence 456789999999999999999999999999999999974 8999999999988 5555
Q ss_pred CccccccccccCCCeeeccCCHHHHHHHhCCCCCcEEEEcccccccccccccCCcEEEEEec
Q 011157 297 DTLAFTKVDAFIPNKIYYHGCLKSFLQITKWNGPEVIYFGDHLFSDLRGPSKAGWRTAAIIH 358 (492)
Q Consensus 297 gk~~~~~~~~l~~~~vY~~G~~~~~~~~lg~~~~~vLyvGDhi~gDI~~ak~~GwrT~~Vvp 358 (492)
+||+ |++|.. +++.+|+++++|+||||+. .||.+|+++|++|++|..
T Consensus 163 ~KP~---------p~~~~~-----a~~~~~~~~~~~l~vgDs~-~Di~aA~~aGi~~i~v~~ 209 (248)
T PLN02770 163 AKPH---------PDPYLK-----ALEVLKVSKDHTFVFEDSV-SGIKAGVAAGMPVVGLTT 209 (248)
T ss_pred CCCC---------hHHHHH-----HHHHhCCChhHEEEEcCCH-HHHHHHHHCCCEEEEEeC
Confidence 6666 777777 9999999999999999999 669999999999999953
No 7
>TIGR01422 phosphonatase phosphonoacetaldehyde hydrolase. This enzyme is a member of the Haloacid Dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases (pfam00702), and contains a modified version of the conserved catalytic motifs of that superfamily: the first motif is usually DxDx(T/V), here it is DxAxT, and in the third motif the normal conserved lysine is instead an arginine. Additionally, the enzyme contains a unique conserved catalytic lysine (B. cereus pos. 53) which is involved in the binding and activation of the substrate through the formation of a Schiff base. The substrate of this enzyme is the product of 2-aminoethylphosphonate (AEP) transaminase, phosphonoacetaldehyde. This degradation pathway for AEP may be related to its toxic properties which are utilized by microorganisms as a chemical warfare agent.
Probab=99.63 E-value=3e-15 Score=147.63 Aligned_cols=104 Identities=16% Similarity=0.086 Sum_probs=90.0
Q ss_pred hccchhHHHHHHHHHHcCCeEEEEeCCChHHHHHhhhhhhccCCCCCCCcCCCc-cEEEEcCCCCCCCCCCCCccccccC
Q 011157 217 LVKNGQVLQFVKMLREKGKKLFLLTNSPYYFVDGGMRFMLEDSTGYTDSWRELF-DVVIAQANKPDFYTSDHPFRCYDTE 295 (492)
Q Consensus 217 i~k~p~l~~~L~~Lk~~GkklfL~TNS~~~y~~~vm~~l~~~~~~~g~~w~~yF-D~iI~~a~KP~FF~~~~pfr~vd~~ 295 (492)
+...|++.++|+.|+++|++++|+||++...++.+++.+ ++.++| |.|+++. ++.
T Consensus 98 ~~~~pg~~e~L~~L~~~g~~l~IvT~~~~~~~~~~l~~~---------gl~~~f~d~ii~~~---------------~~~ 153 (253)
T TIGR01422 98 SSPIPGVIEVIAYLRARGIKIGSTTGYTREMMDVVAPEA---------ALQGYRPDYNVTTD---------------DVP 153 (253)
T ss_pred CccCCCHHHHHHHHHHCCCeEEEECCCcHHHHHHHHHHH---------HhcCCCCceEEccc---------------cCC
Confidence 456799999999999999999999999999999999874 678886 9888877 444
Q ss_pred cCccccccccccCCCeeeccCCHHHHHHHhCCC-CCcEEEEcccccccccccccCCcEEEEEecc
Q 011157 296 KDTLAFTKVDAFIPNKIYYHGCLKSFLQITKWN-GPEVIYFGDHLFSDLRGPSKAGWRTAAIIHE 359 (492)
Q Consensus 296 ~gk~~~~~~~~l~~~~vY~~G~~~~~~~~lg~~-~~~vLyvGDhi~gDI~~ak~~GwrT~~VvpE 359 (492)
.+||. |++|.. +++.+|+. +++|+||||++ .||.+|+++|++|++|...
T Consensus 154 ~~KP~---------p~~~~~-----a~~~l~~~~~~~~l~IGDs~-~Di~aA~~aGi~~i~v~~g 203 (253)
T TIGR01422 154 AGRPA---------PWMALK-----NAIELGVYDVAACVKVGDTV-PDIEEGRNAGMWTVGLILS 203 (253)
T ss_pred CCCCC---------HHHHHH-----HHHHcCCCCchheEEECCcH-HHHHHHHHCCCeEEEEecC
Confidence 55666 778877 99999995 89999999998 6799999999999999643
No 8
>PRK13226 phosphoglycolate phosphatase; Provisional
Probab=99.61 E-value=7.1e-15 Score=143.40 Aligned_cols=104 Identities=16% Similarity=0.156 Sum_probs=89.2
Q ss_pred hhccchhHHHHHHHHHHcCCeEEEEeCCChHHHHHhhhhhhccCCCCCCCcCCCccEEEEcCCCCCCCCCCCCccccccC
Q 011157 216 YLVKNGQVLQFVKMLREKGKKLFLLTNSPYYFVDGGMRFMLEDSTGYTDSWRELFDVVIAQANKPDFYTSDHPFRCYDTE 295 (492)
Q Consensus 216 Yi~k~p~l~~~L~~Lk~~GkklfL~TNS~~~y~~~vm~~l~~~~~~~g~~w~~yFD~iI~~a~KP~FF~~~~pfr~vd~~ 295 (492)
++..-|++.++|+.||+.|++++++||++...+..+++.+ +|.++||+|+++. ++.
T Consensus 93 ~~~~~pg~~~~L~~L~~~g~~l~i~Tn~~~~~~~~~l~~~---------~l~~~f~~i~~~~---------------~~~ 148 (229)
T PRK13226 93 QSQLFDGVEGMLQRLECAGCVWGIVTNKPEYLARLILPQL---------GWEQRCAVLIGGD---------------TLA 148 (229)
T ss_pred cCeeCCCHHHHHHHHHHCCCeEEEECCCCHHHHHHHHHHc---------CchhcccEEEecC---------------cCC
Confidence 4556799999999999999999999999999999888863 8999999988876 233
Q ss_pred cCccccccccccCCCeeeccCCHHHHHHHhCCCCCcEEEEcccccccccccccCCcEEEEEec
Q 011157 296 KDTLAFTKVDAFIPNKIYYHGCLKSFLQITKWNGPEVIYFGDHLFSDLRGPSKAGWRTAAIIH 358 (492)
Q Consensus 296 ~gk~~~~~~~~l~~~~vY~~G~~~~~~~~lg~~~~~vLyvGDhi~gDI~~ak~~GwrT~~Vvp 358 (492)
.+||+ |++|.. +++.+|+++++|+||||+. .||.+|+++||+|++|..
T Consensus 149 ~~KP~---------p~~~~~-----~~~~l~~~p~~~l~IGDs~-~Di~aA~~aG~~~i~v~~ 196 (229)
T PRK13226 149 ERKPH---------PLPLLV-----AAERIGVAPTDCVYVGDDE-RDILAARAAGMPSVAALW 196 (229)
T ss_pred CCCCC---------HHHHHH-----HHHHhCCChhhEEEeCCCH-HHHHHHHHCCCcEEEEee
Confidence 34555 777766 9999999999999999996 679999999999999953
No 9
>PLN03243 haloacid dehalogenase-like hydrolase; Provisional
Probab=99.61 E-value=7.9e-15 Score=146.58 Aligned_cols=102 Identities=13% Similarity=0.224 Sum_probs=91.4
Q ss_pred hccchhHHHHHHHHHHcCCeEEEEeCCChHHHHHhhhhhhccCCCCCCCcCCCccEEEEcCCCCCCCCCCCCccccccCc
Q 011157 217 LVKNGQVLQFVKMLREKGKKLFLLTNSPYYFVDGGMRFMLEDSTGYTDSWRELFDVVIAQANKPDFYTSDHPFRCYDTEK 296 (492)
Q Consensus 217 i~k~p~l~~~L~~Lk~~GkklfL~TNS~~~y~~~vm~~l~~~~~~~g~~w~~yFD~iI~~a~KP~FF~~~~pfr~vd~~~ 296 (492)
+...|++.++|+.|++.|++++|+||++..++..+++.+ +|.+|||.|+++. |+..
T Consensus 108 ~~l~pg~~e~L~~L~~~g~~l~I~Tn~~~~~~~~~l~~~---------gl~~~Fd~ii~~~---------------d~~~ 163 (260)
T PLN03243 108 YRLRPGSREFVQALKKHEIPIAVASTRPRRYLERAIEAV---------GMEGFFSVVLAAE---------------DVYR 163 (260)
T ss_pred cccCCCHHHHHHHHHHCCCEEEEEeCcCHHHHHHHHHHc---------CCHhhCcEEEecc---------------cCCC
Confidence 345789999999999999999999999999999999984 8999999999987 5555
Q ss_pred CccccccccccCCCeeeccCCHHHHHHHhCCCCCcEEEEcccccccccccccCCcEEEEEe
Q 011157 297 DTLAFTKVDAFIPNKIYYHGCLKSFLQITKWNGPEVIYFGDHLFSDLRGPSKAGWRTAAII 357 (492)
Q Consensus 297 gk~~~~~~~~l~~~~vY~~G~~~~~~~~lg~~~~~vLyvGDhi~gDI~~ak~~GwrT~~Vv 357 (492)
+||+ |++|.. +++.+|+++++|+||||+.. ||.+|+++||++++|.
T Consensus 164 ~KP~---------Pe~~~~-----a~~~l~~~p~~~l~IgDs~~-Di~aA~~aG~~~i~v~ 209 (260)
T PLN03243 164 GKPD---------PEMFMY-----AAERLGFIPERCIVFGNSNS-SVEAAHDGCMKCVAVA 209 (260)
T ss_pred CCCC---------HHHHHH-----HHHHhCCChHHeEEEcCCHH-HHHHHHHcCCEEEEEe
Confidence 6777 888877 99999999999999999975 5999999999999985
No 10
>PRK13288 pyrophosphatase PpaX; Provisional
Probab=99.60 E-value=1.1e-14 Score=139.88 Aligned_cols=104 Identities=25% Similarity=0.334 Sum_probs=90.0
Q ss_pred hccchhHHHHHHHHHHcCCeEEEEeCCChHHHHHhhhhhhccCCCCCCCcCCCccEEEEcCCCCCCCCCCCCccccccCc
Q 011157 217 LVKNGQVLQFVKMLREKGKKLFLLTNSPYYFVDGGMRFMLEDSTGYTDSWRELFDVVIAQANKPDFYTSDHPFRCYDTEK 296 (492)
Q Consensus 217 i~k~p~l~~~L~~Lk~~GkklfL~TNS~~~y~~~vm~~l~~~~~~~g~~w~~yFD~iI~~a~KP~FF~~~~pfr~vd~~~ 296 (492)
+..-|++.++|+.|+++|.+++++||+....+..+++.+ +|.+|||.|++.. ++..
T Consensus 81 ~~~~~g~~~~l~~L~~~g~~~~i~S~~~~~~~~~~l~~~---------gl~~~f~~i~~~~---------------~~~~ 136 (214)
T PRK13288 81 VTEYETVYETLKTLKKQGYKLGIVTTKMRDTVEMGLKLT---------GLDEFFDVVITLD---------------DVEH 136 (214)
T ss_pred cccCcCHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHc---------CChhceeEEEecC---------------cCCC
Confidence 446799999999999999999999999999999999874 8999999999866 3444
Q ss_pred CccccccccccCCCeeeccCCHHHHHHHhCCCCCcEEEEcccccccccccccCCcEEEEEecc
Q 011157 297 DTLAFTKVDAFIPNKIYYHGCLKSFLQITKWNGPEVIYFGDHLFSDLRGPSKAGWRTAAIIHE 359 (492)
Q Consensus 297 gk~~~~~~~~l~~~~vY~~G~~~~~~~~lg~~~~~vLyvGDhi~gDI~~ak~~GwrT~~VvpE 359 (492)
+||+ |++|.. +++.+|+++++|+||||+. .||.+|+++|+++++|...
T Consensus 137 ~Kp~---------p~~~~~-----~~~~~~~~~~~~~~iGDs~-~Di~aa~~aG~~~i~v~~g 184 (214)
T PRK13288 137 AKPD---------PEPVLK-----ALELLGAKPEEALMVGDNH-HDILAGKNAGTKTAGVAWT 184 (214)
T ss_pred CCCC---------cHHHHH-----HHHHcCCCHHHEEEECCCH-HHHHHHHHCCCeEEEEcCC
Confidence 5555 666665 9999999999999999997 6899999999999999643
No 11
>COG0637 Predicted phosphatase/phosphohexomutase [General function prediction only]
Probab=99.59 E-value=6.6e-15 Score=143.58 Aligned_cols=103 Identities=18% Similarity=0.267 Sum_probs=96.3
Q ss_pred hccchhHHHHHHHHHHcCCeEEEEeCCChHHHHHhhhhhhccCCCCCCCcCCCccEEEEcCCCCCCCCCCCCccccccCc
Q 011157 217 LVKNGQVLQFVKMLREKGKKLFLLTNSPYYFVDGGMRFMLEDSTGYTDSWRELFDVVIAQANKPDFYTSDHPFRCYDTEK 296 (492)
Q Consensus 217 i~k~p~l~~~L~~Lk~~GkklfL~TNS~~~y~~~vm~~l~~~~~~~g~~w~~yFD~iI~~a~KP~FF~~~~pfr~vd~~~ 296 (492)
+..-|++.++|..|++.|++++++|||+...+..+++-+ +..+||+.+|+++ |+..
T Consensus 85 ~~~~pGv~~~l~~L~~~~i~~avaS~s~~~~~~~~L~~~---------gl~~~f~~~v~~~---------------dv~~ 140 (221)
T COG0637 85 LKPIPGVVELLEQLKARGIPLAVASSSPRRAAERVLARL---------GLLDYFDVIVTAD---------------DVAR 140 (221)
T ss_pred CCCCccHHHHHHHHHhcCCcEEEecCChHHHHHHHHHHc---------cChhhcchhccHH---------------HHhc
Confidence 446789999999999999999999999999999999874 8889999999999 8888
Q ss_pred CccccccccccCCCeeeccCCHHHHHHHhCCCCCcEEEEcccccccccccccCCcEEEEEec
Q 011157 297 DTLAFTKVDAFIPNKIYYHGCLKSFLQITKWNGPEVIYFGDHLFSDLRGPSKAGWRTAAIIH 358 (492)
Q Consensus 297 gk~~~~~~~~l~~~~vY~~G~~~~~~~~lg~~~~~vLyvGDhi~gDI~~ak~~GwrT~~Vvp 358 (492)
+||+ |++|.. +++.+|+.|.+|++|+|+..| |.+++++|++++.|..
T Consensus 141 ~KP~---------Pd~yL~-----Aa~~Lgv~P~~CvviEDs~~G-i~Aa~aAGm~vv~v~~ 187 (221)
T COG0637 141 GKPA---------PDIYLL-----AAERLGVDPEECVVVEDSPAG-IQAAKAAGMRVVGVPA 187 (221)
T ss_pred CCCC---------CHHHHH-----HHHHcCCChHHeEEEecchhH-HHHHHHCCCEEEEecC
Confidence 8998 999999 999999999999999999999 9999999999999965
No 12
>PRK10725 fructose-1-P/6-phosphogluconate phosphatase; Provisional
Probab=99.59 E-value=1.1e-14 Score=136.25 Aligned_cols=98 Identities=17% Similarity=0.264 Sum_probs=83.9
Q ss_pred cchhHHHHHHHHHHcCCeEEEEeCCChHHHHHhhhhhhccCCCCCCCcCCCccEEEEcCCCCCCCCCCCCccccccCcCc
Q 011157 219 KNGQVLQFVKMLREKGKKLFLLTNSPYYFVDGGMRFMLEDSTGYTDSWRELFDVVIAQANKPDFYTSDHPFRCYDTEKDT 298 (492)
Q Consensus 219 k~p~l~~~L~~Lk~~GkklfL~TNS~~~y~~~vm~~l~~~~~~~g~~w~~yFD~iI~~a~KP~FF~~~~pfr~vd~~~gk 298 (492)
+-|+ .++|..|++. ++++|+||++...++..++.+ +|.+|||.|++.. |+..+|
T Consensus 89 ~~~~-~e~L~~L~~~-~~l~I~T~~~~~~~~~~l~~~---------~l~~~fd~i~~~~---------------~~~~~K 142 (188)
T PRK10725 89 PLPL-IEVVKAWHGR-RPMAVGTGSESAIAEALLAHL---------GLRRYFDAVVAAD---------------DVQHHK 142 (188)
T ss_pred CccH-HHHHHHHHhC-CCEEEEcCCchHHHHHHHHhC---------CcHhHceEEEehh---------------hccCCC
Confidence 3454 5888999875 799999999999999999974 8999999999987 555566
Q ss_pred cccccccccCCCeeeccCCHHHHHHHhCCCCCcEEEEcccccccccccccCCcEEEEEe
Q 011157 299 LAFTKVDAFIPNKIYYHGCLKSFLQITKWNGPEVIYFGDHLFSDLRGPSKAGWRTAAII 357 (492)
Q Consensus 299 ~~~~~~~~l~~~~vY~~G~~~~~~~~lg~~~~~vLyvGDhi~gDI~~ak~~GwrT~~Vv 357 (492)
|. |++|.. +++.+|..+++|+||||...+ |.+|+++||+|++|.
T Consensus 143 P~---------p~~~~~-----~~~~~~~~~~~~l~igDs~~d-i~aA~~aG~~~i~~~ 186 (188)
T PRK10725 143 PA---------PDTFLR-----CAQLMGVQPTQCVVFEDADFG-IQAARAAGMDAVDVR 186 (188)
T ss_pred CC---------hHHHHH-----HHHHcCCCHHHeEEEeccHhh-HHHHHHCCCEEEeec
Confidence 66 788877 999999999999999999554 999999999999984
No 13
>PRK13478 phosphonoacetaldehyde hydrolase; Provisional
Probab=99.58 E-value=2.9e-14 Score=142.11 Aligned_cols=104 Identities=15% Similarity=0.071 Sum_probs=88.0
Q ss_pred hccchhHHHHHHHHHHcCCeEEEEeCCChHHHHHhhhhhhccCCCCCCCcCCCc-cEEEEcCCCCCCCCCCCCccccccC
Q 011157 217 LVKNGQVLQFVKMLREKGKKLFLLTNSPYYFVDGGMRFMLEDSTGYTDSWRELF-DVVIAQANKPDFYTSDHPFRCYDTE 295 (492)
Q Consensus 217 i~k~p~l~~~L~~Lk~~GkklfL~TNS~~~y~~~vm~~l~~~~~~~g~~w~~yF-D~iI~~a~KP~FF~~~~pfr~vd~~ 295 (492)
+...|++.++|+.|+++|++++|+||++...++.+++.+ ++.++| |.|+++. ++.
T Consensus 100 ~~~~pg~~elL~~L~~~g~~l~I~T~~~~~~~~~~l~~~---------~l~~~~~d~i~~~~---------------~~~ 155 (267)
T PRK13478 100 ATPIPGVLEVIAALRARGIKIGSTTGYTREMMDVVVPLA---------AAQGYRPDHVVTTD---------------DVP 155 (267)
T ss_pred CCCCCCHHHHHHHHHHCCCEEEEEcCCcHHHHHHHHHHH---------hhcCCCceEEEcCC---------------cCC
Confidence 456799999999999999999999999999999988863 566675 8888776 444
Q ss_pred cCccccccccccCCCeeeccCCHHHHHHHhCCC-CCcEEEEcccccccccccccCCcEEEEEecc
Q 011157 296 KDTLAFTKVDAFIPNKIYYHGCLKSFLQITKWN-GPEVIYFGDHLFSDLRGPSKAGWRTAAIIHE 359 (492)
Q Consensus 296 ~gk~~~~~~~~l~~~~vY~~G~~~~~~~~lg~~-~~~vLyvGDhi~gDI~~ak~~GwrT~~VvpE 359 (492)
.+||+ |++|.. +++.+|+. +++|+||||+. .||.+|+++|++|++|...
T Consensus 156 ~~KP~---------p~~~~~-----a~~~l~~~~~~e~l~IGDs~-~Di~aA~~aG~~~i~v~~g 205 (267)
T PRK13478 156 AGRPY---------PWMALK-----NAIELGVYDVAACVKVDDTV-PGIEEGLNAGMWTVGVILS 205 (267)
T ss_pred CCCCC---------hHHHHH-----HHHHcCCCCCcceEEEcCcH-HHHHHHHHCCCEEEEEccC
Confidence 55666 778777 99999996 68999999999 6699999999999999754
No 14
>PLN02575 haloacid dehalogenase-like hydrolase
Probab=99.57 E-value=2.2e-14 Score=150.16 Aligned_cols=102 Identities=16% Similarity=0.245 Sum_probs=91.8
Q ss_pred ccchhHHHHHHHHHHcCCeEEEEeCCChHHHHHhhhhhhccCCCCCCCcCCCccEEEEcCCCCCCCCCCCCccccccCcC
Q 011157 218 VKNGQVLQFVKMLREKGKKLFLLTNSPYYFVDGGMRFMLEDSTGYTDSWRELFDVVIAQANKPDFYTSDHPFRCYDTEKD 297 (492)
Q Consensus 218 ~k~p~l~~~L~~Lk~~GkklfL~TNS~~~y~~~vm~~l~~~~~~~g~~w~~yFD~iI~~a~KP~FF~~~~pfr~vd~~~g 297 (492)
..-|++.++|+.|+++|++++|+||++..+++.+++.+ +|.+|||.|+++. |+..+
T Consensus 216 ~l~pGa~ElL~~Lk~~GiklaIaSn~~~~~~~~~L~~l---------gL~~yFd~Iv~sd---------------dv~~~ 271 (381)
T PLN02575 216 RLRTGSQEFVNVLMNYKIPMALVSTRPRKTLENAIGSI---------GIRGFFSVIVAAE---------------DVYRG 271 (381)
T ss_pred CcCcCHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHc---------CCHHHceEEEecC---------------cCCCC
Confidence 34589999999999999999999999999999999974 8999999999988 55556
Q ss_pred ccccccccccCCCeeeccCCHHHHHHHhCCCCCcEEEEcccccccccccccCCcEEEEEec
Q 011157 298 TLAFTKVDAFIPNKIYYHGCLKSFLQITKWNGPEVIYFGDHLFSDLRGPSKAGWRTAAIIH 358 (492)
Q Consensus 298 k~~~~~~~~l~~~~vY~~G~~~~~~~~lg~~~~~vLyvGDhi~gDI~~ak~~GwrT~~Vvp 358 (492)
||. |++|.. +++.+|+.+++|+||||+.. ||.+|+++||++++|..
T Consensus 272 KP~---------Peifl~-----A~~~lgl~Peecl~IGDS~~-DIeAAk~AGm~~IgV~~ 317 (381)
T PLN02575 272 KPD---------PEMFIY-----AAQLLNFIPERCIVFGNSNQ-TVEAAHDARMKCVAVAS 317 (381)
T ss_pred CCC---------HHHHHH-----HHHHcCCCcccEEEEcCCHH-HHHHHHHcCCEEEEECC
Confidence 776 888888 99999999999999999986 59999999999999964
No 15
>TIGR03351 PhnX-like phosphonatase-like hydrolase. This clade of sequences are the closest homologs to the PhnX enzyme, phosphonoacetaldehyde (Pald) hydrolase (phosphonatase, TIGR01422). This phosphonatase-like enzyme and PhnX itself are members of the haloacid dehalogenase (HAD) superfamily (pfam00702) having a a number of distinctive features that set them apart from typical HAD enzymes. The typical HAD N-terminal motif DxDx(T/V) here is DxAGT and the usual conserved lysine prior to the C-terminal motif is instead an arginine. Also distinctive of phosphonatase, and particular to its bi-catalytic mechanism is a conserved lysine in the variable "cap" domain. This lysine forms a Schiff base with the aldehyde of phosphonoacetaldehyde, providing, through the resulting positive charge, a polarization of the C-P bond necesary for cleavage as well as a route to the initial product of cleavage, an ene-amine. The conservation of these elements in this phosphonatase-like enzyme suggests that the
Probab=99.57 E-value=4.8e-14 Score=135.59 Aligned_cols=104 Identities=19% Similarity=0.213 Sum_probs=90.2
Q ss_pred ccchhHHHHHHHHHHcCCeEEEEeCCChHHHHHhhhhhhccCCCCCCCcC--CCccEEEEcCCCCCCCCCCCCccccccC
Q 011157 218 VKNGQVLQFVKMLREKGKKLFLLTNSPYYFVDGGMRFMLEDSTGYTDSWR--ELFDVVIAQANKPDFYTSDHPFRCYDTE 295 (492)
Q Consensus 218 ~k~p~l~~~L~~Lk~~GkklfL~TNS~~~y~~~vm~~l~~~~~~~g~~w~--~yFD~iI~~a~KP~FF~~~~pfr~vd~~ 295 (492)
...|++.++|..|+++|+++.++||+....+..+++.+ +|. +|||.+++.. |..
T Consensus 87 ~l~~G~~~~L~~L~~~g~~~~ivT~~~~~~~~~~l~~~---------~l~~~~~f~~i~~~~---------------~~~ 142 (220)
T TIGR03351 87 VALPGAEEAFRSLRSSGIKVALTTGFDRDTAERLLEKL---------GWTVGDDVDAVVCPS---------------DVA 142 (220)
T ss_pred ccCCCHHHHHHHHHHCCCEEEEEeCCchHHHHHHHHHh---------hhhhhccCCEEEcCC---------------cCC
Confidence 46789999999999999999999999999999999974 666 9999999987 444
Q ss_pred cCccccccccccCCCeeeccCCHHHHHHHhCCC-CCcEEEEcccccccccccccCCcEE-EEEeccc
Q 011157 296 KDTLAFTKVDAFIPNKIYYHGCLKSFLQITKWN-GPEVIYFGDHLFSDLRGPSKAGWRT-AAIIHEL 360 (492)
Q Consensus 296 ~gk~~~~~~~~l~~~~vY~~G~~~~~~~~lg~~-~~~vLyvGDhi~gDI~~ak~~GwrT-~~VvpEl 360 (492)
.+||. |++|.. +++.+|+. +++|+||||+. .||.+|+++||+| ++|....
T Consensus 143 ~~KP~---------p~~~~~-----a~~~~~~~~~~~~~~igD~~-~Di~aa~~aG~~~~i~~~~g~ 194 (220)
T TIGR03351 143 AGRPA---------PDLILR-----AMELTGVQDVQSVAVAGDTP-NDLEAGINAGAGAVVGVLTGA 194 (220)
T ss_pred CCCCC---------HHHHHH-----HHHHcCCCChhHeEEeCCCH-HHHHHHHHCCCCeEEEEecCC
Confidence 56666 777776 99999998 69999999998 6899999999999 8886543
No 16
>PRK10826 2-deoxyglucose-6-phosphatase; Provisional
Probab=99.57 E-value=5.4e-14 Score=135.91 Aligned_cols=104 Identities=13% Similarity=0.174 Sum_probs=90.8
Q ss_pred hccchhHHHHHHHHHHcCCeEEEEeCCChHHHHHhhhhhhccCCCCCCCcCCCccEEEEcCCCCCCCCCCCCccccccCc
Q 011157 217 LVKNGQVLQFVKMLREKGKKLFLLTNSPYYFVDGGMRFMLEDSTGYTDSWRELFDVVIAQANKPDFYTSDHPFRCYDTEK 296 (492)
Q Consensus 217 i~k~p~l~~~L~~Lk~~GkklfL~TNS~~~y~~~vm~~l~~~~~~~g~~w~~yFD~iI~~a~KP~FF~~~~pfr~vd~~~ 296 (492)
...-|++.++|+.|++.|++++|+||+....++.+++.+ ++.++||.+++++ ++..
T Consensus 91 ~~~~~g~~~~l~~l~~~g~~~~i~S~~~~~~~~~~l~~~---------~l~~~f~~~~~~~---------------~~~~ 146 (222)
T PRK10826 91 RPLLPGVREALALCKAQGLKIGLASASPLHMLEAVLTMF---------DLRDYFDALASAE---------------KLPY 146 (222)
T ss_pred CCCCCCHHHHHHHHHHCCCeEEEEeCCcHHHHHHHHHhC---------cchhcccEEEEcc---------------cCCC
Confidence 445689999999999999999999999999999999984 7999999999887 4445
Q ss_pred CccccccccccCCCeeeccCCHHHHHHHhCCCCCcEEEEcccccccccccccCCcEEEEEecc
Q 011157 297 DTLAFTKVDAFIPNKIYYHGCLKSFLQITKWNGPEVIYFGDHLFSDLRGPSKAGWRTAAIIHE 359 (492)
Q Consensus 297 gk~~~~~~~~l~~~~vY~~G~~~~~~~~lg~~~~~vLyvGDhi~gDI~~ak~~GwrT~~VvpE 359 (492)
+||+ |++|.. +++.+|+++++|+||||+. .||.+|+++|+++++|...
T Consensus 147 ~Kp~---------~~~~~~-----~~~~~~~~~~~~~~igDs~-~Di~aA~~aG~~~i~v~~~ 194 (222)
T PRK10826 147 SKPH---------PEVYLN-----CAAKLGVDPLTCVALEDSF-NGMIAAKAARMRSIVVPAP 194 (222)
T ss_pred CCCC---------HHHHHH-----HHHHcCCCHHHeEEEcCCh-hhHHHHHHcCCEEEEecCC
Confidence 5665 666666 9999999999999999999 6899999999999999644
No 17
>TIGR01449 PGP_bact 2-phosphoglycolate phosphatase, prokaryotic. This enzyme is a member of the Haloacid Dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolase enzymes (pfam00702).
Probab=99.56 E-value=3e-14 Score=135.83 Aligned_cols=104 Identities=18% Similarity=0.207 Sum_probs=90.3
Q ss_pred chhccchhHHHHHHHHHHcCCeEEEEeCCChHHHHHhhhhhhccCCCCCCCcCCCccEEEEcCCCCCCCCCCCCcccccc
Q 011157 215 RYLVKNGQVLQFVKMLREKGKKLFLLTNSPYYFVDGGMRFMLEDSTGYTDSWRELFDVVIAQANKPDFYTSDHPFRCYDT 294 (492)
Q Consensus 215 kYi~k~p~l~~~L~~Lk~~GkklfL~TNS~~~y~~~vm~~l~~~~~~~g~~w~~yFD~iI~~a~KP~FF~~~~pfr~vd~ 294 (492)
+.+...|++.++|+.|+++|.+++++||++...+..+++.+ +|.++||.++++. +.
T Consensus 82 ~~~~~~~g~~~~L~~l~~~g~~~~i~S~~~~~~~~~~l~~~---------~l~~~f~~~~~~~---------------~~ 137 (213)
T TIGR01449 82 ELTSVFPGVEATLGALRAKGLRLGLVTNKPTPLARPLLELL---------GLAKYFSVLIGGD---------------SL 137 (213)
T ss_pred ccCccCCCHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHc---------CcHhhCcEEEecC---------------CC
Confidence 34567899999999999999999999999999999999974 8999999988776 44
Q ss_pred CcCccccccccccCCCeeeccCCHHHHHHHhCCCCCcEEEEcccccccccccccCCcEEEEEe
Q 011157 295 EKDTLAFTKVDAFIPNKIYYHGCLKSFLQITKWNGPEVIYFGDHLFSDLRGPSKAGWRTAAII 357 (492)
Q Consensus 295 ~~gk~~~~~~~~l~~~~vY~~G~~~~~~~~lg~~~~~vLyvGDhi~gDI~~ak~~GwrT~~Vv 357 (492)
..+||. |++|.. +++.+|+++++|+||||+. .|+.+|+++|+.+++|.
T Consensus 138 ~~~Kp~---------p~~~~~-----~~~~~~~~~~~~~~igDs~-~d~~aa~~aG~~~i~v~ 185 (213)
T TIGR01449 138 AQRKPH---------PDPLLL-----AAERLGVAPQQMVYVGDSR-VDIQAARAAGCPSVLLT 185 (213)
T ss_pred CCCCCC---------hHHHHH-----HHHHcCCChhHeEEeCCCH-HHHHHHHHCCCeEEEEc
Confidence 445555 667766 9999999999999999995 67999999999999995
No 18
>TIGR02252 DREG-2 REG-2-like, HAD superfamily (subfamily IA) hydrolase. Most likely, these sequences, like the vast majority of HAD sequences, represent phosphatase enzymes.
Probab=99.55 E-value=4.9e-14 Score=133.86 Aligned_cols=99 Identities=25% Similarity=0.361 Sum_probs=83.4
Q ss_pred ccchhHHHHHHHHHHcCCeEEEEeCCChHHHHHhhhhhhccCCCCCCCcCCCccEEEEcCCCCCCCCCCCCccccccCcC
Q 011157 218 VKNGQVLQFVKMLREKGKKLFLLTNSPYYFVDGGMRFMLEDSTGYTDSWRELFDVVIAQANKPDFYTSDHPFRCYDTEKD 297 (492)
Q Consensus 218 ~k~p~l~~~L~~Lk~~GkklfL~TNS~~~y~~~vm~~l~~~~~~~g~~w~~yFD~iI~~a~KP~FF~~~~pfr~vd~~~g 297 (492)
...|++.++|+.|+++|++++|+||++... ...++. .+|.++||.|+++. ++..+
T Consensus 105 ~~~~g~~~~l~~L~~~g~~~~i~Sn~~~~~-~~~l~~---------~~l~~~fd~i~~s~---------------~~~~~ 159 (203)
T TIGR02252 105 QVYPDAIKLLKDLRERGLILGVISNFDSRL-RGLLEA---------LGLLEYFDFVVTSY---------------EVGAE 159 (203)
T ss_pred eeCcCHHHHHHHHHHCCCEEEEEeCCchhH-HHHHHH---------CCcHHhcceEEeec---------------ccCCC
Confidence 456899999999999999999999998754 555654 37899999999877 34445
Q ss_pred ccccccccccCCCeeeccCCHHHHHHHhCCCCCcEEEEcccccccccccccCCcEEEE
Q 011157 298 TLAFTKVDAFIPNKIYYHGCLKSFLQITKWNGPEVIYFGDHLFSDLRGPSKAGWRTAA 355 (492)
Q Consensus 298 k~~~~~~~~l~~~~vY~~G~~~~~~~~lg~~~~~vLyvGDhi~gDI~~ak~~GwrT~~ 355 (492)
||. |++|.. +++.+|+++++|++|||+...||.+|+++||+|++
T Consensus 160 KP~---------~~~~~~-----~~~~~~~~~~~~~~IgD~~~~Di~~A~~aG~~~i~ 203 (203)
T TIGR02252 160 KPD---------PKIFQE-----ALERAGISPEEALHIGDSLRNDYQGARAAGWRALL 203 (203)
T ss_pred CCC---------HHHHHH-----HHHHcCCChhHEEEECCCchHHHHHHHHcCCeeeC
Confidence 555 667766 99999999999999999998899999999999974
No 19
>TIGR01990 bPGM beta-phosphoglucomutase. The enzyme from L. lactis has been extensively characterized including a remarkable crystal structure which traps the pentacoordinate transition state.
Probab=99.54 E-value=8.6e-14 Score=129.60 Aligned_cols=98 Identities=14% Similarity=0.127 Sum_probs=82.8
Q ss_pred ccchhHHHHHHHHHHcCCeEEEEeCCChHHHHHhhhhhhccCCCCCCCcCCCccEEEEcCCCCCCCCCCCCccccccCcC
Q 011157 218 VKNGQVLQFVKMLREKGKKLFLLTNSPYYFVDGGMRFMLEDSTGYTDSWRELFDVVIAQANKPDFYTSDHPFRCYDTEKD 297 (492)
Q Consensus 218 ~k~p~l~~~L~~Lk~~GkklfL~TNS~~~y~~~vm~~l~~~~~~~g~~w~~yFD~iI~~a~KP~FF~~~~pfr~vd~~~g 297 (492)
...|++.++|+.|+++|++++|+||+.. ...+++. .+|.++||.++++. +...+
T Consensus 87 ~~~pg~~~~L~~L~~~g~~~~i~s~~~~--~~~~l~~---------~~l~~~f~~~~~~~---------------~~~~~ 140 (185)
T TIGR01990 87 DVLPGIKNLLDDLKKNNIKIALASASKN--APTVLEK---------LGLIDYFDAIVDPA---------------EIKKG 140 (185)
T ss_pred ccCccHHHHHHHHHHCCCeEEEEeCCcc--HHHHHHh---------cCcHhhCcEEEehh---------------hcCCC
Confidence 3569999999999999999999999753 3456665 37899999999877 44445
Q ss_pred ccccccccccCCCeeeccCCHHHHHHHhCCCCCcEEEEcccccccccccccCCcEEEEE
Q 011157 298 TLAFTKVDAFIPNKIYYHGCLKSFLQITKWNGPEVIYFGDHLFSDLRGPSKAGWRTAAI 356 (492)
Q Consensus 298 k~~~~~~~~l~~~~vY~~G~~~~~~~~lg~~~~~vLyvGDhi~gDI~~ak~~GwrT~~V 356 (492)
||. |++|.. +++.+|+++++|+||||+. .||.+|+++||+|++|
T Consensus 141 kp~---------p~~~~~-----~~~~~~~~~~~~v~vgD~~-~di~aA~~aG~~~i~v 184 (185)
T TIGR01990 141 KPD---------PEIFLA-----AAEGLGVSPSECIGIEDAQ-AGIEAIKAAGMFAVGV 184 (185)
T ss_pred CCC---------hHHHHH-----HHHHcCCCHHHeEEEecCH-HHHHHHHHcCCEEEec
Confidence 555 778877 9999999999999999996 7899999999999987
No 20
>PLN02940 riboflavin kinase
Probab=99.53 E-value=7.6e-14 Score=146.76 Aligned_cols=104 Identities=18% Similarity=0.295 Sum_probs=90.6
Q ss_pred hccchhHHHHHHHHHHcCCeEEEEeCCChHHHHHhhhhhhccCCCCCCCcCCCccEEEEcCCCCCCCCCCCCccccccCc
Q 011157 217 LVKNGQVLQFVKMLREKGKKLFLLTNSPYYFVDGGMRFMLEDSTGYTDSWRELFDVVIAQANKPDFYTSDHPFRCYDTEK 296 (492)
Q Consensus 217 i~k~p~l~~~L~~Lk~~GkklfL~TNS~~~y~~~vm~~l~~~~~~~g~~w~~yFD~iI~~a~KP~FF~~~~pfr~vd~~~ 296 (492)
+...|++.++|+.|++.|++++|+||++...++..+... .+|.+|||.|++++ ++..
T Consensus 92 ~~l~pGv~elL~~Lk~~g~~l~IvTn~~~~~~~~~l~~~--------~gl~~~Fd~ii~~d---------------~v~~ 148 (382)
T PLN02940 92 IKALPGANRLIKHLKSHGVPMALASNSPRANIEAKISCH--------QGWKESFSVIVGGD---------------EVEK 148 (382)
T ss_pred CCCCcCHHHHHHHHHHCCCcEEEEeCCcHHHHHHHHHhc--------cChHhhCCEEEehh---------------hcCC
Confidence 345699999999999999999999999999999887621 48999999999988 5555
Q ss_pred CccccccccccCCCeeeccCCHHHHHHHhCCCCCcEEEEcccccccccccccCCcEEEEEec
Q 011157 297 DTLAFTKVDAFIPNKIYYHGCLKSFLQITKWNGPEVIYFGDHLFSDLRGPSKAGWRTAAIIH 358 (492)
Q Consensus 297 gk~~~~~~~~l~~~~vY~~G~~~~~~~~lg~~~~~vLyvGDhi~gDI~~ak~~GwrT~~Vvp 358 (492)
+||+ |++|.. +++.+|+++++|++|||+.. ||.+|+++|+++++|..
T Consensus 149 ~KP~---------p~~~~~-----a~~~lgv~p~~~l~VGDs~~-Di~aA~~aGi~~I~v~~ 195 (382)
T PLN02940 149 GKPS---------PDIFLE-----AAKRLNVEPSNCLVIEDSLP-GVMAGKAAGMEVIAVPS 195 (382)
T ss_pred CCCC---------HHHHHH-----HHHHcCCChhHEEEEeCCHH-HHHHHHHcCCEEEEECC
Confidence 6666 778877 99999999999999999986 79999999999999954
No 21
>PRK10563 6-phosphogluconate phosphatase; Provisional
Probab=99.52 E-value=1.6e-13 Score=132.14 Aligned_cols=100 Identities=11% Similarity=0.086 Sum_probs=84.7
Q ss_pred hhccchhHHHHHHHHHHcCCeEEEEeCCChHHHHHhhhhhhccCCCCCCCcCCCcc-EEEEcCCCCCCCCCCCCcccccc
Q 011157 216 YLVKNGQVLQFVKMLREKGKKLFLLTNSPYYFVDGGMRFMLEDSTGYTDSWRELFD-VVIAQANKPDFYTSDHPFRCYDT 294 (492)
Q Consensus 216 Yi~k~p~l~~~L~~Lk~~GkklfL~TNS~~~y~~~vm~~l~~~~~~~g~~w~~yFD-~iI~~a~KP~FF~~~~pfr~vd~ 294 (492)
.+...|++.++|+.| +++++|+||++...++..++. .++.++|| +|+++. ++
T Consensus 86 ~~~~~~gv~~~L~~L---~~~~~ivTn~~~~~~~~~l~~---------~~l~~~F~~~v~~~~---------------~~ 138 (221)
T PRK10563 86 ELEPIAGANALLESI---TVPMCVVSNGPVSKMQHSLGK---------TGMLHYFPDKLFSGY---------------DI 138 (221)
T ss_pred cCCcCCCHHHHHHHc---CCCEEEEeCCcHHHHHHHHHh---------cChHHhCcceEeeHH---------------hc
Confidence 355678999999998 489999999999999999887 38899996 666665 44
Q ss_pred CcCccccccccccCCCeeeccCCHHHHHHHhCCCCCcEEEEcccccccccccccCCcEEEEEe
Q 011157 295 EKDTLAFTKVDAFIPNKIYYHGCLKSFLQITKWNGPEVIYFGDHLFSDLRGPSKAGWRTAAII 357 (492)
Q Consensus 295 ~~gk~~~~~~~~l~~~~vY~~G~~~~~~~~lg~~~~~vLyvGDhi~gDI~~ak~~GwrT~~Vv 357 (492)
..+||+ |++|.. +++.+|+.+++|++|||+.. ||.+|+++||+|+++.
T Consensus 139 ~~~KP~---------p~~~~~-----a~~~~~~~p~~~l~igDs~~-di~aA~~aG~~~i~~~ 186 (221)
T PRK10563 139 QRWKPD---------PALMFH-----AAEAMNVNVENCILVDDSSA-GAQSGIAAGMEVFYFC 186 (221)
T ss_pred CCCCCC---------hHHHHH-----HHHHcCCCHHHeEEEeCcHh-hHHHHHHCCCEEEEEC
Confidence 455666 888888 99999999999999999985 6999999999999885
No 22
>PRK11587 putative phosphatase; Provisional
Probab=99.49 E-value=5.7e-13 Score=128.71 Aligned_cols=102 Identities=11% Similarity=0.081 Sum_probs=84.3
Q ss_pred hccchhHHHHHHHHHHcCCeEEEEeCCChHHHHHhhhhhhccCCCCCCCcCCCccEEEEcCCCCCCCCCCCCccccccCc
Q 011157 217 LVKNGQVLQFVKMLREKGKKLFLLTNSPYYFVDGGMRFMLEDSTGYTDSWRELFDVVIAQANKPDFYTSDHPFRCYDTEK 296 (492)
Q Consensus 217 i~k~p~l~~~L~~Lk~~GkklfL~TNS~~~y~~~vm~~l~~~~~~~g~~w~~yFD~iI~~a~KP~FF~~~~pfr~vd~~~ 296 (492)
+..-|++.++|+.|+++|++++++||++...+...+... ++ .+||.|++.. ++..
T Consensus 82 ~~~~pg~~e~L~~L~~~g~~~~ivTn~~~~~~~~~l~~~---------~l-~~~~~i~~~~---------------~~~~ 136 (218)
T PRK11587 82 ITALPGAIALLNHLNKLGIPWAIVTSGSVPVASARHKAA---------GL-PAPEVFVTAE---------------RVKR 136 (218)
T ss_pred ceeCcCHHHHHHHHHHcCCcEEEEcCCCchHHHHHHHhc---------CC-CCccEEEEHH---------------HhcC
Confidence 446789999999999999999999999998887766642 34 5688887765 3444
Q ss_pred CccccccccccCCCeeeccCCHHHHHHHhCCCCCcEEEEcccccccccccccCCcEEEEEec
Q 011157 297 DTLAFTKVDAFIPNKIYYHGCLKSFLQITKWNGPEVIYFGDHLFSDLRGPSKAGWRTAAIIH 358 (492)
Q Consensus 297 gk~~~~~~~~l~~~~vY~~G~~~~~~~~lg~~~~~vLyvGDhi~gDI~~ak~~GwrT~~Vvp 358 (492)
+||. |++|.. +++.+|+.+++|+||||+.. ||.+|+++|++|++|-.
T Consensus 137 ~KP~---------p~~~~~-----~~~~~g~~p~~~l~igDs~~-di~aA~~aG~~~i~v~~ 183 (218)
T PRK11587 137 GKPE---------PDAYLL-----GAQLLGLAPQECVVVEDAPA-GVLSGLAAGCHVIAVNA 183 (218)
T ss_pred CCCC---------cHHHHH-----HHHHcCCCcccEEEEecchh-hhHHHHHCCCEEEEECC
Confidence 5565 778877 99999999999999999975 59999999999999953
No 23
>TIGR02009 PGMB-YQAB-SF beta-phosphoglucomutase family hydrolase. All of these are members of the larger Haloacid dehalogenase (HAD) subfamily IA and include the "variant 3" glu-asp version of the third conserved HAD domain (TIGR01509).
Probab=99.47 E-value=5.8e-13 Score=124.05 Aligned_cols=100 Identities=17% Similarity=0.189 Sum_probs=83.9
Q ss_pred hhccchhHHHHHHHHHHcCCeEEEEeCCChHHHHHhhhhhhccCCCCCCCcCCCccEEEEcCCCCCCCCCCCCccccccC
Q 011157 216 YLVKNGQVLQFVKMLREKGKKLFLLTNSPYYFVDGGMRFMLEDSTGYTDSWRELFDVVIAQANKPDFYTSDHPFRCYDTE 295 (492)
Q Consensus 216 Yi~k~p~l~~~L~~Lk~~GkklfL~TNS~~~y~~~vm~~l~~~~~~~g~~w~~yFD~iI~~a~KP~FF~~~~pfr~vd~~ 295 (492)
.+...|++.++|+.|++.|.+++++||+ ..++.+++. .+|.+|||.|++.. +..
T Consensus 86 ~~~~~~g~~~~l~~l~~~g~~i~i~S~~--~~~~~~l~~---------~~l~~~f~~v~~~~---------------~~~ 139 (185)
T TIGR02009 86 GAEVLPGIENFLKRLKKKGIAVGLGSSS--KNADRILAK---------LGLTDYFDAIVDAD---------------EVK 139 (185)
T ss_pred CCCCCcCHHHHHHHHHHcCCeEEEEeCc--hhHHHHHHH---------cChHHHCCEeeehh---------------hCC
Confidence 3667899999999999999999999999 678888886 38999999998876 233
Q ss_pred cCccccccccccCCCeeeccCCHHHHHHHhCCCCCcEEEEcccccccccccccCCcEEEEE
Q 011157 296 KDTLAFTKVDAFIPNKIYYHGCLKSFLQITKWNGPEVIYFGDHLFSDLRGPSKAGWRTAAI 356 (492)
Q Consensus 296 ~gk~~~~~~~~l~~~~vY~~G~~~~~~~~lg~~~~~vLyvGDhi~gDI~~ak~~GwrT~~V 356 (492)
.+||. +++|.. +++.+|.++++|+||||+. .||.+|+++||+|++|
T Consensus 140 ~~kp~---------~~~~~~-----~~~~~~~~~~~~v~IgD~~-~di~aA~~~G~~~i~v 185 (185)
T TIGR02009 140 EGKPH---------PETFLL-----AAELLGVSPNECVVFEDAL-AGVQAARAAGMFAVAV 185 (185)
T ss_pred CCCCC---------hHHHHH-----HHHHcCCCHHHeEEEeCcH-hhHHHHHHCCCeEeeC
Confidence 33444 666655 9999999999999999996 6799999999999986
No 24
>PRK13222 phosphoglycolate phosphatase; Provisional
Probab=99.47 E-value=1.6e-12 Score=124.87 Aligned_cols=104 Identities=18% Similarity=0.217 Sum_probs=87.0
Q ss_pred hccchhHHHHHHHHHHcCCeEEEEeCCChHHHHHhhhhhhccCCCCCCCcCCCccEEEEcCCCCCCCCCCCCccccccCc
Q 011157 217 LVKNGQVLQFVKMLREKGKKLFLLTNSPYYFVDGGMRFMLEDSTGYTDSWRELFDVVIAQANKPDFYTSDHPFRCYDTEK 296 (492)
Q Consensus 217 i~k~p~l~~~L~~Lk~~GkklfL~TNS~~~y~~~vm~~l~~~~~~~g~~w~~yFD~iI~~a~KP~FF~~~~pfr~vd~~~ 296 (492)
....|++.++|+.|++.|++++++||+....+..++..+ +|.++||.+++.. +...
T Consensus 92 ~~~~~g~~~~l~~l~~~g~~~~i~S~~~~~~~~~~l~~~---------~l~~~f~~~~~~~---------------~~~~ 147 (226)
T PRK13222 92 SRLYPGVKETLAALKAAGYPLAVVTNKPTPFVAPLLEAL---------GIADYFSVVIGGD---------------SLPN 147 (226)
T ss_pred CccCCCHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHc---------CCccCccEEEcCC---------------CCCC
Confidence 446799999999999999999999999999999988874 7889999988765 2223
Q ss_pred CccccccccccCCCeeeccCCHHHHHHHhCCCCCcEEEEcccccccccccccCCcEEEEEecc
Q 011157 297 DTLAFTKVDAFIPNKIYYHGCLKSFLQITKWNGPEVIYFGDHLFSDLRGPSKAGWRTAAIIHE 359 (492)
Q Consensus 297 gk~~~~~~~~l~~~~vY~~G~~~~~~~~lg~~~~~vLyvGDhi~gDI~~ak~~GwrT~~VvpE 359 (492)
+||. |++|.. +++.+++++++|+||||+. .|+.+|+++||.+++|...
T Consensus 148 ~kp~---------~~~~~~-----~~~~~~~~~~~~i~igD~~-~Di~~a~~~g~~~i~v~~g 195 (226)
T PRK13222 148 KKPD---------PAPLLL-----ACEKLGLDPEEMLFVGDSR-NDIQAARAAGCPSVGVTYG 195 (226)
T ss_pred CCcC---------hHHHHH-----HHHHcCCChhheEEECCCH-HHHHHHHHCCCcEEEECcC
Confidence 3443 555555 9999999999999999995 7899999999999999643
No 25
>PRK13223 phosphoglycolate phosphatase; Provisional
Probab=99.45 E-value=1.1e-12 Score=131.73 Aligned_cols=103 Identities=20% Similarity=0.256 Sum_probs=87.7
Q ss_pred hccchhHHHHHHHHHHcCCeEEEEeCCChHHHHHhhhhhhccCCCCCCCcCCCccEEEEcCCCCCCCCCCCCccccccCc
Q 011157 217 LVKNGQVLQFVKMLREKGKKLFLLTNSPYYFVDGGMRFMLEDSTGYTDSWRELFDVVIAQANKPDFYTSDHPFRCYDTEK 296 (492)
Q Consensus 217 i~k~p~l~~~L~~Lk~~GkklfL~TNS~~~y~~~vm~~l~~~~~~~g~~w~~yFD~iI~~a~KP~FF~~~~pfr~vd~~~ 296 (492)
....|++.++|+.|+++|.+++|+||++...+..++..+ +|..+||.|+++. ++..
T Consensus 100 ~~~~~g~~e~L~~Lk~~g~~l~ivTn~~~~~~~~~l~~~---------~i~~~f~~i~~~d---------------~~~~ 155 (272)
T PRK13223 100 TVVYPGVRDTLKWLKKQGVEMALITNKPERFVAPLLDQM---------KIGRYFRWIIGGD---------------TLPQ 155 (272)
T ss_pred CccCCCHHHHHHHHHHCCCeEEEEECCcHHHHHHHHHHc---------CcHhhCeEEEecC---------------CCCC
Confidence 445699999999999999999999999999999988873 7889999988876 3333
Q ss_pred CccccccccccCCCeeeccCCHHHHHHHhCCCCCcEEEEcccccccccccccCCcEEEEEec
Q 011157 297 DTLAFTKVDAFIPNKIYYHGCLKSFLQITKWNGPEVIYFGDHLFSDLRGPSKAGWRTAAIIH 358 (492)
Q Consensus 297 gk~~~~~~~~l~~~~vY~~G~~~~~~~~lg~~~~~vLyvGDhi~gDI~~ak~~GwrT~~Vvp 358 (492)
+||+ |++|.. +++.+|+++++|++|||+ ..||.+|+++||+|++|.-
T Consensus 156 ~Kp~---------p~~~~~-----~~~~~g~~~~~~l~IGD~-~~Di~aA~~aGi~~i~v~~ 202 (272)
T PRK13223 156 KKPD---------PAALLF-----VMKMAGVPPSQSLFVGDS-RSDVLAAKAAGVQCVALSY 202 (272)
T ss_pred CCCC---------cHHHHH-----HHHHhCCChhHEEEECCC-HHHHHHHHHCCCeEEEEec
Confidence 4555 666666 999999999999999999 4789999999999999964
No 26
>COG2179 Predicted hydrolase of the HAD superfamily [General function prediction only]
Probab=99.45 E-value=2.9e-13 Score=125.51 Aligned_cols=104 Identities=22% Similarity=0.269 Sum_probs=88.1
Q ss_pred cchhHHHHHHHHHHcCCeEEEEeCCChHHHHHhhhhhhccCCCCCCCcCCCccEEEEcCCCCCCCCCCCCccccccCcCc
Q 011157 219 KNGQVLQFVKMLREKGKKLFLLTNSPYYFVDGGMRFMLEDSTGYTDSWRELFDVVIAQANKPDFYTSDHPFRCYDTEKDT 298 (492)
Q Consensus 219 k~p~l~~~L~~Lk~~GkklfL~TNS~~~y~~~vm~~l~~~~~~~g~~w~~yFD~iI~~a~KP~FF~~~~pfr~vd~~~gk 298 (492)
..|++..|+.++|++|.+++++||.....+......+ |.+ .|..|+||.-
T Consensus 47 ~tpe~~~W~~e~k~~gi~v~vvSNn~e~RV~~~~~~l-------~v~-------fi~~A~KP~~---------------- 96 (175)
T COG2179 47 ATPELRAWLAELKEAGIKVVVVSNNKESRVARAAEKL-------GVP-------FIYRAKKPFG---------------- 96 (175)
T ss_pred CCHHHHHHHHHHHhcCCEEEEEeCCCHHHHHhhhhhc-------CCc-------eeecccCccH----------------
Confidence 3589999999999999999999999999998877654 444 8899998821
Q ss_pred cccccccccCCCeeeccCCHHHHHHHhCCCCCcEEEEcccccccccccccCCcEEEEEeccchhHHHHhhchh
Q 011157 299 LAFTKVDAFIPNKIYYHGCLKSFLQITKWNGPEVIYFGDHLFSDLRGPSKAGWRTAAIIHELESEIRIQNDET 371 (492)
Q Consensus 299 ~~~~~~~~l~~~~vY~~G~~~~~~~~lg~~~~~vLyvGDhi~gDI~~ak~~GwrT~~VvpEl~~Ei~~~~~~~ 371 (492)
-.+.++++.++.++++|++|||++++||++++++|++|++|.|-...+. |.++-
T Consensus 97 -----------------~~fr~Al~~m~l~~~~vvmVGDqL~TDVlggnr~G~~tIlV~Pl~~~d~--~~t~~ 150 (175)
T COG2179 97 -----------------RAFRRALKEMNLPPEEVVMVGDQLFTDVLGGNRAGMRTILVEPLVAPDG--WITKI 150 (175)
T ss_pred -----------------HHHHHHHHHcCCChhHEEEEcchhhhhhhcccccCcEEEEEEEeccccc--hhhhh
Confidence 2245699999999999999999999999999999999999999777663 55543
No 27
>PLN02779 haloacid dehalogenase-like hydrolase family protein
Probab=99.45 E-value=1.7e-12 Score=131.32 Aligned_cols=106 Identities=19% Similarity=0.157 Sum_probs=87.6
Q ss_pred hccchhHHHHHHHHHHcCCeEEEEeCCChHHHHHhhhhhhccCCCCCCCcCCCccEEEEcCCCCCCCCCCCCccccccCc
Q 011157 217 LVKNGQVLQFVKMLREKGKKLFLLTNSPYYFVDGGMRFMLEDSTGYTDSWRELFDVVIAQANKPDFYTSDHPFRCYDTEK 296 (492)
Q Consensus 217 i~k~p~l~~~L~~Lk~~GkklfL~TNS~~~y~~~vm~~l~~~~~~~g~~w~~yFD~iI~~a~KP~FF~~~~pfr~vd~~~ 296 (492)
+...|++.++|+.|++.|++++|+||++...++.+++.+. +.+|.++|++| ++. ++..
T Consensus 143 ~~l~pGv~elL~~L~~~g~~l~IvTn~~~~~~~~~l~~~~------~~~~~~~~~~v-~~~---------------~~~~ 200 (286)
T PLN02779 143 LPLRPGVLRLMDEALAAGIKVAVCSTSNEKAVSKIVNTLL------GPERAQGLDVF-AGD---------------DVPK 200 (286)
T ss_pred CCchhhHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHhc------cccccCceEEE-ecc---------------ccCC
Confidence 4567899999999999999999999999999999888642 34667777776 443 3344
Q ss_pred CccccccccccCCCeeeccCCHHHHHHHhCCCCCcEEEEcccccccccccccCCcEEEEEecc
Q 011157 297 DTLAFTKVDAFIPNKIYYHGCLKSFLQITKWNGPEVIYFGDHLFSDLRGPSKAGWRTAAIIHE 359 (492)
Q Consensus 297 gk~~~~~~~~l~~~~vY~~G~~~~~~~~lg~~~~~vLyvGDhi~gDI~~ak~~GwrT~~VvpE 359 (492)
+||. |++|.. +++.+|+++++|+||||++. ||.+|+++||++++|...
T Consensus 201 ~KP~---------p~~~~~-----a~~~~~~~p~~~l~IGDs~~-Di~aA~~aG~~~i~v~~g 248 (286)
T PLN02779 201 KKPD---------PDIYNL-----AAETLGVDPSRCVVVEDSVI-GLQAAKAAGMRCIVTKSS 248 (286)
T ss_pred CCCC---------HHHHHH-----HHHHhCcChHHEEEEeCCHH-hHHHHHHcCCEEEEEccC
Confidence 5665 777777 99999999999999999985 799999999999999653
No 28
>PRK10748 flavin mononucleotide phosphatase; Provisional
Probab=99.44 E-value=1e-12 Score=129.05 Aligned_cols=99 Identities=18% Similarity=0.191 Sum_probs=83.0
Q ss_pred hccchhHHHHHHHHHHcCCeEEEEeCCChHHHHHhhhhhhccCCCCCCCcCCCccEEEEcCCCCCCCCCCCCccccccCc
Q 011157 217 LVKNGQVLQFVKMLREKGKKLFLLTNSPYYFVDGGMRFMLEDSTGYTDSWRELFDVVIAQANKPDFYTSDHPFRCYDTEK 296 (492)
Q Consensus 217 i~k~p~l~~~L~~Lk~~GkklfL~TNS~~~y~~~vm~~l~~~~~~~g~~w~~yFD~iI~~a~KP~FF~~~~pfr~vd~~~ 296 (492)
+...|++.++|+.||+. .+++++||++.. ++. .++.+|||.|++.. +...
T Consensus 112 ~~~~~gv~~~L~~L~~~-~~l~i~Tn~~~~-----~~~---------~gl~~~fd~i~~~~---------------~~~~ 161 (238)
T PRK10748 112 IDVPQATHDTLKQLAKK-WPLVAITNGNAQ-----PEL---------FGLGDYFEFVLRAG---------------PHGR 161 (238)
T ss_pred CCCCccHHHHHHHHHcC-CCEEEEECCCch-----HHH---------CCcHHhhceeEecc---------------cCCc
Confidence 55678999999999975 889999998865 232 47889999999877 4444
Q ss_pred CccccccccccCCCeeeccCCHHHHHHHhCCCCCcEEEEcccccccccccccCCcEEEEEecc
Q 011157 297 DTLAFTKVDAFIPNKIYYHGCLKSFLQITKWNGPEVIYFGDHLFSDLRGPSKAGWRTAAIIHE 359 (492)
Q Consensus 297 gk~~~~~~~~l~~~~vY~~G~~~~~~~~lg~~~~~vLyvGDhi~gDI~~ak~~GwrT~~VvpE 359 (492)
.||+ +++|.. +++.+|+.+++|+||||++..||.+|+++||+|+.|.+.
T Consensus 162 ~KP~---------p~~~~~-----a~~~~~~~~~~~~~VGD~~~~Di~~A~~aG~~~i~v~~~ 210 (238)
T PRK10748 162 SKPF---------SDMYHL-----AAEKLNVPIGEILHVGDDLTTDVAGAIRCGMQACWINPE 210 (238)
T ss_pred CCCc---------HHHHHH-----HHHHcCCChhHEEEEcCCcHHHHHHHHHCCCeEEEEcCC
Confidence 5665 778777 999999999999999999988999999999999999654
No 29
>COG1011 Predicted hydrolase (HAD superfamily) [General function prediction only]
Probab=99.43 E-value=1.9e-12 Score=124.36 Aligned_cols=107 Identities=24% Similarity=0.261 Sum_probs=93.4
Q ss_pred hhccchhHHHHHHHHHHcCCeEEEEeCCChHHHHHhhhhhhccCCCCCCCcCCCccEEEEcCCCCCCCCCCCCccccccC
Q 011157 216 YLVKNGQVLQFVKMLREKGKKLFLLTNSPYYFVDGGMRFMLEDSTGYTDSWRELFDVVIAQANKPDFYTSDHPFRCYDTE 295 (492)
Q Consensus 216 Yi~k~p~l~~~L~~Lk~~GkklfL~TNS~~~y~~~vm~~l~~~~~~~g~~w~~yFD~iI~~a~KP~FF~~~~pfr~vd~~ 295 (492)
.+...|++.+.|+++++. ++++++||+........+..+ ++.++||.|+++. ++.
T Consensus 97 ~~~~~~~~~~~L~~l~~~-~~l~ilTNg~~~~~~~~l~~~---------gl~~~Fd~v~~s~---------------~~g 151 (229)
T COG1011 97 LLPDYPEALEALKELGKK-YKLGILTNGARPHQERKLRQL---------GLLDYFDAVFISE---------------DVG 151 (229)
T ss_pred hCccChhHHHHHHHHHhh-ccEEEEeCCChHHHHHHHHHc---------CChhhhheEEEec---------------ccc
Confidence 355668999999999998 999999999999999988874 5999999999988 444
Q ss_pred cCccccccccccCCCeeeccCCHHHHHHHhCCCCCcEEEEcccccccccccccCCcEEEEEeccch
Q 011157 296 KDTLAFTKVDAFIPNKIYYHGCLKSFLQITKWNGPEVIYFGDHLFSDLRGPSKAGWRTAAIIHELE 361 (492)
Q Consensus 296 ~gk~~~~~~~~l~~~~vY~~G~~~~~~~~lg~~~~~vLyvGDhi~gDI~~ak~~GwrT~~VvpEl~ 361 (492)
..||. +++|.. +++.+|+++++|++|||+...||.+|+++||+|+.|.+...
T Consensus 152 ~~KP~---------~~~f~~-----~~~~~g~~p~~~l~VgD~~~~di~gA~~~G~~~vwi~~~~~ 203 (229)
T COG1011 152 VAKPD---------PEIFEY-----ALEKLGVPPEEALFVGDSLENDILGARALGMKTVWINRGGK 203 (229)
T ss_pred cCCCC---------cHHHHH-----HHHHcCCCcceEEEECCChhhhhHHHHhcCcEEEEECCCCC
Confidence 45666 888888 99999999999999999999999999999999998876543
No 30
>COG0546 Gph Predicted phosphatases [General function prediction only]
Probab=99.42 E-value=2.2e-12 Score=125.29 Aligned_cols=106 Identities=19% Similarity=0.211 Sum_probs=88.8
Q ss_pred hhccchhHHHHHHHHHHcCCeEEEEeCCChHHHHHhhhhhhccCCCCCCCcCCCccEEEEcCCCCCCCCCCCCccccccC
Q 011157 216 YLVKNGQVLQFVKMLREKGKKLFLLTNSPYYFVDGGMRFMLEDSTGYTDSWRELFDVVIAQANKPDFYTSDHPFRCYDTE 295 (492)
Q Consensus 216 Yi~k~p~l~~~L~~Lk~~GkklfL~TNS~~~y~~~vm~~l~~~~~~~g~~w~~yFD~iI~~a~KP~FF~~~~pfr~vd~~ 295 (492)
.....|++.+.|..|+++|.+++++||.+...++.+++.+ ++.+|||+|++.+ +..
T Consensus 87 ~~~~~~gv~e~L~~L~~~g~~l~i~T~k~~~~~~~~l~~~---------gl~~~F~~i~g~~---------------~~~ 142 (220)
T COG0546 87 ESRLFPGVKELLAALKSAGYKLGIVTNKPERELDILLKAL---------GLADYFDVIVGGD---------------DVP 142 (220)
T ss_pred cCccCCCHHHHHHHHHhCCCeEEEEeCCcHHHHHHHHHHh---------CCccccceEEcCC---------------CCC
Confidence 4557899999999999999999999999999999999974 8999999999944 222
Q ss_pred cCccccccccccCCCeeeccCCHHHHHHHhCCCCCcEEEEcccccccccccccCCcEEEEEeccc
Q 011157 296 KDTLAFTKVDAFIPNKIYYHGCLKSFLQITKWNGPEVIYFGDHLFSDLRGPSKAGWRTAAIIHEL 360 (492)
Q Consensus 296 ~gk~~~~~~~~l~~~~vY~~G~~~~~~~~lg~~~~~vLyvGDhi~gDI~~ak~~GwrT~~VvpEl 360 (492)
..||+ |..... +++.+|..+++++||||+... |.+|+++|..+++|-..-
T Consensus 143 ~~KP~---------P~~l~~-----~~~~~~~~~~~~l~VGDs~~D-i~aA~~Ag~~~v~v~~g~ 192 (220)
T COG0546 143 PPKPD---------PEPLLL-----LLEKLGLDPEEALMVGDSLND-ILAAKAAGVPAVGVTWGY 192 (220)
T ss_pred CCCcC---------HHHHHH-----HHHHhCCChhheEEECCCHHH-HHHHHHcCCCEEEEECCC
Confidence 33444 444444 889999997799999999987 999999999999997643
No 31
>PRK13225 phosphoglycolate phosphatase; Provisional
Probab=99.42 E-value=1.5e-12 Score=131.17 Aligned_cols=102 Identities=20% Similarity=0.287 Sum_probs=85.0
Q ss_pred hccchhHHHHHHHHHHcCCeEEEEeCCChHHHHHhhhhhhccCCCCCCCcCCCccEEEEcCCCCCCCCCCCCccccccCc
Q 011157 217 LVKNGQVLQFVKMLREKGKKLFLLTNSPYYFVDGGMRFMLEDSTGYTDSWRELFDVVIAQANKPDFYTSDHPFRCYDTEK 296 (492)
Q Consensus 217 i~k~p~l~~~L~~Lk~~GkklfL~TNS~~~y~~~vm~~l~~~~~~~g~~w~~yFD~iI~~a~KP~FF~~~~pfr~vd~~~ 296 (492)
+...|++.++|+.|+++|.+++++||+...+++.+++.+ +|.+|||.|+++...+
T Consensus 141 ~~l~pg~~e~L~~L~~~gi~laIvSn~~~~~~~~~L~~~---------gl~~~F~~vi~~~~~~---------------- 195 (273)
T PRK13225 141 LQLFPGVADLLAQLRSRSLCLGILSSNSRQNIEAFLQRQ---------GLRSLFSVVQAGTPIL---------------- 195 (273)
T ss_pred CCcCCCHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHc---------CChhheEEEEecCCCC----------------
Confidence 456799999999999999999999999999999999874 8999999987765210
Q ss_pred CccccccccccCCCeeeccCCHHHHHHHhCCCCCcEEEEcccccccccccccCCcEEEEEeccc
Q 011157 297 DTLAFTKVDAFIPNKIYYHGCLKSFLQITKWNGPEVIYFGDHLFSDLRGPSKAGWRTAAIIHEL 360 (492)
Q Consensus 297 gk~~~~~~~~l~~~~vY~~G~~~~~~~~lg~~~~~vLyvGDhi~gDI~~ak~~GwrT~~VvpEl 360 (492)
.| +.+|.. +++.+|+.+++|+||||+. .||.+|+++||++++|....
T Consensus 196 ~k-----------~~~~~~-----~l~~~~~~p~~~l~IGDs~-~Di~aA~~AG~~~I~v~~g~ 242 (273)
T PRK13225 196 SK-----------RRALSQ-----LVAREGWQPAAVMYVGDET-RDVEAARQVGLIAVAVTWGF 242 (273)
T ss_pred CC-----------HHHHHH-----HHHHhCcChhHEEEECCCH-HHHHHHHHCCCeEEEEecCC
Confidence 01 334444 8899999999999999997 57999999999999996543
No 32
>PF13419 HAD_2: Haloacid dehalogenase-like hydrolase; PDB: 2FI1_A 2I6X_A 3SD7_A 4F71_A 4DFD_B 4F72_B 4DCC_A 3DDH_A 3KZX_A 2B0C_A ....
Probab=99.39 E-value=5.3e-13 Score=120.94 Aligned_cols=104 Identities=20% Similarity=0.304 Sum_probs=91.1
Q ss_pred cchhccchhHHHHHHHHHHcCCeEEEEeCCChHHHHHhhhhhhccCCCCCCCcCCCccEEEEcCCCCCCCCCCCCccccc
Q 011157 214 NRYLVKNGQVLQFVKMLREKGKKLFLLTNSPYYFVDGGMRFMLEDSTGYTDSWRELFDVVIAQANKPDFYTSDHPFRCYD 293 (492)
Q Consensus 214 ~kYi~k~p~l~~~L~~Lk~~GkklfL~TNS~~~y~~~vm~~l~~~~~~~g~~w~~yFD~iI~~a~KP~FF~~~~pfr~vd 293 (492)
...+.+.|++.++|+.|++.|.+++++||++...+...++.+ +|.++||.|++.+ |
T Consensus 73 ~~~~~~~~~~~~~L~~l~~~~~~~~i~Sn~~~~~~~~~l~~~---------~~~~~f~~i~~~~---------------~ 128 (176)
T PF13419_consen 73 ESKLQPYPGVRELLERLKAKGIPLVIVSNGSRERIERVLERL---------GLDDYFDEIISSD---------------D 128 (176)
T ss_dssp HGGEEESTTHHHHHHHHHHTTSEEEEEESSEHHHHHHHHHHT---------THGGGCSEEEEGG---------------G
T ss_pred hhccchhhhhhhhhhhcccccceeEEeecCCccccccccccc---------ccccccccccccc---------------h
Confidence 356778999999999999999999999999999999999984 8889999999887 3
Q ss_pred cCcCccccccccccCCCeeeccCCHHHHHHHhCCCCCcEEEEcccccccccccccCCcEEEEE
Q 011157 294 TEKDTLAFTKVDAFIPNKIYYHGCLKSFLQITKWNGPEVIYFGDHLFSDLRGPSKAGWRTAAI 356 (492)
Q Consensus 294 ~~~gk~~~~~~~~l~~~~vY~~G~~~~~~~~lg~~~~~vLyvGDhi~gDI~~ak~~GwrT~~V 356 (492)
....||. +.+|.. +++.+|+++++|++|||+. .||.+|+++||+|+.|
T Consensus 129 ~~~~Kp~---------~~~~~~-----~~~~~~~~p~~~~~vgD~~-~d~~~A~~~G~~~i~v 176 (176)
T PF13419_consen 129 VGSRKPD---------PDAYRR-----ALEKLGIPPEEILFVGDSP-SDVEAAKEAGIKTIWV 176 (176)
T ss_dssp SSSSTTS---------HHHHHH-----HHHHHTSSGGGEEEEESSH-HHHHHHHHTTSEEEEE
T ss_pred hhhhhhH---------HHHHHH-----HHHHcCCCcceEEEEeCCH-HHHHHHHHcCCeEEeC
Confidence 3334554 556655 9999999999999999999 8899999999999986
No 33
>TIGR01428 HAD_type_II 2-haloalkanoic acid dehalogenase, type II. Note that the Type I HAD enzymes have not yet been fully characterized, but clearly utilize a substantially different catalytic mechanism and are thus unlikely to be related.
Probab=99.39 E-value=5.3e-13 Score=126.45 Aligned_cols=103 Identities=21% Similarity=0.293 Sum_probs=90.5
Q ss_pred ccchhHHHHHHHHHHcCCeEEEEeCCChHHHHHhhhhhhccCCCCCCCcCCCccEEEEcCCCCCCCCCCCCccccccCcC
Q 011157 218 VKNGQVLQFVKMLREKGKKLFLLTNSPYYFVDGGMRFMLEDSTGYTDSWRELFDVVIAQANKPDFYTSDHPFRCYDTEKD 297 (492)
Q Consensus 218 ~k~p~l~~~L~~Lk~~GkklfL~TNS~~~y~~~vm~~l~~~~~~~g~~w~~yFD~iI~~a~KP~FF~~~~pfr~vd~~~g 297 (492)
...|++.++|++||++|++++++||++...+...++.+ +|.++||.|+++. ++...
T Consensus 92 ~~~~~~~~~L~~L~~~g~~~~i~Sn~~~~~~~~~l~~~---------gl~~~fd~i~~s~---------------~~~~~ 147 (198)
T TIGR01428 92 PPHPDVPAGLRALKERGYRLAILSNGSPAMLKSLVKHA---------GLDDPFDAVLSAD---------------AVRAY 147 (198)
T ss_pred CCCCCHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHC---------CChhhhheeEehh---------------hcCCC
Confidence 35689999999999999999999999999999998874 7899999999877 44445
Q ss_pred ccccccccccCCCeeeccCCHHHHHHHhCCCCCcEEEEcccccccccccccCCcEEEEEecc
Q 011157 298 TLAFTKVDAFIPNKIYYHGCLKSFLQITKWNGPEVIYFGDHLFSDLRGPSKAGWRTAAIIHE 359 (492)
Q Consensus 298 k~~~~~~~~l~~~~vY~~G~~~~~~~~lg~~~~~vLyvGDhi~gDI~~ak~~GwrT~~VvpE 359 (492)
||. +++|.. +++.+|+++++|++|||+. .||.+|+++||+|+.|.+.
T Consensus 148 KP~---------~~~~~~-----~~~~~~~~p~~~~~vgD~~-~Di~~A~~~G~~~i~v~r~ 194 (198)
T TIGR01428 148 KPA---------PQVYQL-----ALEALGVPPDEVLFVASNP-WDLGGAKKFGFKTAWVNRP 194 (198)
T ss_pred CCC---------HHHHHH-----HHHHhCCChhhEEEEeCCH-HHHHHHHHCCCcEEEecCC
Confidence 665 777777 9999999999999999999 7899999999999999653
No 34
>TIGR01509 HAD-SF-IA-v3 haloacid dehalogenase superfamily, subfamily IA, variant 3 with third motif having DD or ED. HAD subfamilies caused by an overly broad single model.
Probab=99.34 E-value=3.3e-12 Score=118.16 Aligned_cols=100 Identities=30% Similarity=0.349 Sum_probs=84.0
Q ss_pred hccchhHHHHHHHHHHcCCeEEEEeCCChHHHHHhhhhhhccCCCCCCCcCCCccEEEEcCCCCCCCCCCCCccccccCc
Q 011157 217 LVKNGQVLQFVKMLREKGKKLFLLTNSPYYFVDGGMRFMLEDSTGYTDSWRELFDVVIAQANKPDFYTSDHPFRCYDTEK 296 (492)
Q Consensus 217 i~k~p~l~~~L~~Lk~~GkklfL~TNS~~~y~~~vm~~l~~~~~~~g~~w~~yFD~iI~~a~KP~FF~~~~pfr~vd~~~ 296 (492)
+...|++.++|+.|++.|++++++||++... ...... .++.++||.|+++. +...
T Consensus 84 ~~~~~g~~~~l~~l~~~g~~~~i~Tn~~~~~-~~~~~~---------~~l~~~f~~i~~~~---------------~~~~ 138 (183)
T TIGR01509 84 LKPLPGVEPLLEALRARGKKLALLTNSPRDH-AVLVQE---------LGLRDLFDVVIFSG---------------DVGR 138 (183)
T ss_pred CccCcCHHHHHHHHHHCCCeEEEEeCCchHH-HHHHHh---------cCCHHHCCEEEEcC---------------CCCC
Confidence 5678999999999999999999999999988 554443 37888999999876 3344
Q ss_pred CccccccccccCCCeeeccCCHHHHHHHhCCCCCcEEEEcccccccccccccCCcEEEEE
Q 011157 297 DTLAFTKVDAFIPNKIYYHGCLKSFLQITKWNGPEVIYFGDHLFSDLRGPSKAGWRTAAI 356 (492)
Q Consensus 297 gk~~~~~~~~l~~~~vY~~G~~~~~~~~lg~~~~~vLyvGDhi~gDI~~ak~~GwrT~~V 356 (492)
+||. |++|.. +++.+|+++++|++|||+.. ||.+|+++||+|++|
T Consensus 139 ~KP~---------~~~~~~-----~~~~~~~~~~~~~~vgD~~~-di~aA~~~G~~~i~v 183 (183)
T TIGR01509 139 GKPD---------PDIYLL-----ALKKLGLKPEECLFVDDSPA-GIEAAKAAGMHTVLV 183 (183)
T ss_pred CCCC---------HHHHHH-----HHHHcCCCcceEEEEcCCHH-HHHHHHHcCCEEEeC
Confidence 5555 666766 99999999999999999996 699999999999975
No 35
>PRK14988 GMP/IMP nucleotidase; Provisional
Probab=99.34 E-value=1.2e-12 Score=127.65 Aligned_cols=102 Identities=15% Similarity=0.193 Sum_probs=88.3
Q ss_pred hccchhHHHHHHHHHHcCCeEEEEeCCChHHHHHhhhhhhccCCCCCCCcCCCccEEEEcCCCCCCCCCCCCccccccCc
Q 011157 217 LVKNGQVLQFVKMLREKGKKLFLLTNSPYYFVDGGMRFMLEDSTGYTDSWRELFDVVIAQANKPDFYTSDHPFRCYDTEK 296 (492)
Q Consensus 217 i~k~p~l~~~L~~Lk~~GkklfL~TNS~~~y~~~vm~~l~~~~~~~g~~w~~yFD~iI~~a~KP~FF~~~~pfr~vd~~~ 296 (492)
+...|++.++|+.||++|++++|+||++...+...++.+ +|.+|||.|+++. +...
T Consensus 92 ~~~~~g~~e~L~~Lk~~g~~~~i~Tn~~~~~~~~~l~~~---------~l~~~fd~iv~s~---------------~~~~ 147 (224)
T PRK14988 92 AVLREDTVPFLEALKASGKRRILLTNAHPHNLAVKLEHT---------GLDAHLDLLLSTH---------------TFGY 147 (224)
T ss_pred CCcCCCHHHHHHHHHhCCCeEEEEeCcCHHHHHHHHHHC---------CcHHHCCEEEEee---------------eCCC
Confidence 455789999999999999999999999999999988873 8999999999877 4555
Q ss_pred CccccccccccCCCeeeccCCHHHHHHHhCCCCCcEEEEcccccccccccccCCcEEEEEe
Q 011157 297 DTLAFTKVDAFIPNKIYYHGCLKSFLQITKWNGPEVIYFGDHLFSDLRGPSKAGWRTAAII 357 (492)
Q Consensus 297 gk~~~~~~~~l~~~~vY~~G~~~~~~~~lg~~~~~vLyvGDhi~gDI~~ak~~GwrT~~Vv 357 (492)
+||+ |++|.. +++.+|+++++|+||||+.. ||.+|+++||+|+..+
T Consensus 148 ~KP~---------p~~~~~-----~~~~~~~~p~~~l~igDs~~-di~aA~~aG~~~~~~v 193 (224)
T PRK14988 148 PKED---------QRLWQA-----VAEHTGLKAERTLFIDDSEP-ILDAAAQFGIRYCLGV 193 (224)
T ss_pred CCCC---------HHHHHH-----HHHHcCCChHHEEEEcCCHH-HHHHHHHcCCeEEEEE
Confidence 5666 778877 99999999999999999986 5999999999975433
No 36
>PRK09456 ?-D-glucose-1-phosphatase; Provisional
Probab=99.33 E-value=1.5e-12 Score=124.07 Aligned_cols=102 Identities=18% Similarity=0.274 Sum_probs=88.3
Q ss_pred cchhHHHHHHHHHHcCCeEEEEeCCChHHHHHhhhhhhccCCCCCCCcCCCccEEEEcCCCCCCCCCCCCccccccCcCc
Q 011157 219 KNGQVLQFVKMLREKGKKLFLLTNSPYYFVDGGMRFMLEDSTGYTDSWRELFDVVIAQANKPDFYTSDHPFRCYDTEKDT 298 (492)
Q Consensus 219 k~p~l~~~L~~Lk~~GkklfL~TNS~~~y~~~vm~~l~~~~~~~g~~w~~yFD~iI~~a~KP~FF~~~~pfr~vd~~~gk 298 (492)
..|++.++|+.||+.|++++++||++...+...+.. ..+|.++||.|++++ ++..+|
T Consensus 85 ~~~g~~e~L~~l~~~g~~~~i~Sn~~~~~~~~~~~~--------~~~l~~~fd~v~~s~---------------~~~~~K 141 (199)
T PRK09456 85 LRPEVIAIMHKLREQGHRVVVLSNTNRLHTTFWPEE--------YPEVRAAADHIYLSQ---------------DLGMRK 141 (199)
T ss_pred cCHHHHHHHHHHHhCCCcEEEEcCCchhhHHHHHhh--------chhHHHhcCEEEEec---------------ccCCCC
Confidence 578999999999999999999999998877665543 147889999999987 556667
Q ss_pred cccccccccCCCeeeccCCHHHHHHHhCCCCCcEEEEcccccccccccccCCcEEEEEec
Q 011157 299 LAFTKVDAFIPNKIYYHGCLKSFLQITKWNGPEVIYFGDHLFSDLRGPSKAGWRTAAIIH 358 (492)
Q Consensus 299 ~~~~~~~~l~~~~vY~~G~~~~~~~~lg~~~~~vLyvGDhi~gDI~~ak~~GwrT~~Vvp 358 (492)
|+ |++|.. +++.+|+++++|+||||+..+ |.+|+++||+|+.|.+
T Consensus 142 P~---------p~~~~~-----~~~~~~~~p~~~l~vgD~~~d-i~aA~~aG~~~i~~~~ 186 (199)
T PRK09456 142 PE---------ARIYQH-----VLQAEGFSAADAVFFDDNADN-IEAANALGITSILVTD 186 (199)
T ss_pred CC---------HHHHHH-----HHHHcCCChhHeEEeCCCHHH-HHHHHHcCCEEEEecC
Confidence 77 888887 999999999999999999865 9999999999999854
No 37
>PLN02919 haloacid dehalogenase-like hydrolase family protein
Probab=99.31 E-value=2.3e-11 Score=142.45 Aligned_cols=103 Identities=19% Similarity=0.255 Sum_probs=90.9
Q ss_pred cchhHHHHHHHHHHcCCeEEEEeCCChHHHHHhhhhhhccCCCCCCCcC-CCccEEEEcCCCCCCCCCCCCccccccCcC
Q 011157 219 KNGQVLQFVKMLREKGKKLFLLTNSPYYFVDGGMRFMLEDSTGYTDSWR-ELFDVVIAQANKPDFYTSDHPFRCYDTEKD 297 (492)
Q Consensus 219 k~p~l~~~L~~Lk~~GkklfL~TNS~~~y~~~vm~~l~~~~~~~g~~w~-~yFD~iI~~a~KP~FF~~~~pfr~vd~~~g 297 (492)
..|++.++|+.||++|++++|+||+....++.+|+.+ +|. .|||.|++.. ++..+
T Consensus 162 ~~pG~~elL~~Lk~~G~~l~IvSn~~~~~~~~~L~~~---------gl~~~~Fd~iv~~~---------------~~~~~ 217 (1057)
T PLN02919 162 GFPGALELITQCKNKGLKVAVASSADRIKVDANLAAA---------GLPLSMFDAIVSAD---------------AFENL 217 (1057)
T ss_pred cCccHHHHHHHHHhCCCeEEEEeCCcHHHHHHHHHHc---------CCChhHCCEEEECc---------------ccccC
Confidence 4689999999999999999999999999999999874 774 8999999877 55556
Q ss_pred ccccccccccCCCeeeccCCHHHHHHHhCCCCCcEEEEcccccccccccccCCcEEEEEeccc
Q 011157 298 TLAFTKVDAFIPNKIYYHGCLKSFLQITKWNGPEVIYFGDHLFSDLRGPSKAGWRTAAIIHEL 360 (492)
Q Consensus 298 k~~~~~~~~l~~~~vY~~G~~~~~~~~lg~~~~~vLyvGDhi~gDI~~ak~~GwrT~~VvpEl 360 (492)
||. |++|.. +++.+|+.+++|+||||... ||.+|+++||++++|....
T Consensus 218 KP~---------Pe~~~~-----a~~~lgv~p~e~v~IgDs~~-Di~AA~~aGm~~I~v~~~~ 265 (1057)
T PLN02919 218 KPA---------PDIFLA-----AAKILGVPTSECVVIEDALA-GVQAARAAGMRCIAVTTTL 265 (1057)
T ss_pred CCC---------HHHHHH-----HHHHcCcCcccEEEEcCCHH-HHHHHHHcCCEEEEECCCC
Confidence 666 888877 99999999999999999985 6999999999999997653
No 38
>PRK09449 dUMP phosphatase; Provisional
Probab=99.30 E-value=3.6e-12 Score=122.94 Aligned_cols=103 Identities=19% Similarity=0.207 Sum_probs=88.7
Q ss_pred hccchhHHHHHHHHHHcCCeEEEEeCCChHHHHHhhhhhhccCCCCCCCcCCCccEEEEcCCCCCCCCCCCCccccccCc
Q 011157 217 LVKNGQVLQFVKMLREKGKKLFLLTNSPYYFVDGGMRFMLEDSTGYTDSWRELFDVVIAQANKPDFYTSDHPFRCYDTEK 296 (492)
Q Consensus 217 i~k~p~l~~~L~~Lk~~GkklfL~TNS~~~y~~~vm~~l~~~~~~~g~~w~~yFD~iI~~a~KP~FF~~~~pfr~vd~~~ 296 (492)
+...|++.++|+.|+ +|.+++++||+..+.+...++.+ ++.+|||.|+++. ++..
T Consensus 94 ~~~~~g~~~~L~~L~-~~~~~~i~Tn~~~~~~~~~l~~~---------~l~~~fd~v~~~~---------------~~~~ 148 (224)
T PRK09449 94 CTPLPGAVELLNALR-GKVKMGIITNGFTELQQVRLERT---------GLRDYFDLLVISE---------------QVGV 148 (224)
T ss_pred CccCccHHHHHHHHH-hCCeEEEEeCCcHHHHHHHHHhC---------ChHHHcCEEEEEC---------------ccCC
Confidence 346799999999999 68999999999999999988873 8899999999887 4444
Q ss_pred CccccccccccCCCeeeccCCHHHHHHHhCCCC-CcEEEEcccccccccccccCCcEEEEEec
Q 011157 297 DTLAFTKVDAFIPNKIYYHGCLKSFLQITKWNG-PEVIYFGDHLFSDLRGPSKAGWRTAAIIH 358 (492)
Q Consensus 297 gk~~~~~~~~l~~~~vY~~G~~~~~~~~lg~~~-~~vLyvGDhi~gDI~~ak~~GwrT~~Vvp 358 (492)
.||. |++|.. +++.+|+.+ ++|+||||+...||.+|+++||+|+.|..
T Consensus 149 ~KP~---------p~~~~~-----~~~~~~~~~~~~~~~vgD~~~~Di~~A~~aG~~~i~~~~ 197 (224)
T PRK09449 149 AKPD---------VAIFDY-----ALEQMGNPDRSRVLMVGDNLHSDILGGINAGIDTCWLNA 197 (224)
T ss_pred CCCC---------HHHHHH-----HHHHcCCCCcccEEEEcCCcHHHHHHHHHCCCcEEEECC
Confidence 5665 777777 999999865 78999999999889999999999999863
No 39
>TIGR01454 AHBA_synth_RP 3-amino-5-hydroxybenoic acid synthesis related protein. The most closely related enzyme below the noise cutoff is IndB which is involved in the biosynthesis of Indigoidine in Pectobacterium (Erwinia) chrysanthemi, a gamma proteobacter. This enzyme is similarly related to PGP. In this case, too it is unclear what role would be be played by a PGPase activity.
Probab=99.28 E-value=5.4e-12 Score=120.36 Aligned_cols=105 Identities=20% Similarity=0.190 Sum_probs=89.4
Q ss_pred hhccchhHHHHHHHHHHcCCeEEEEeCCChHHHHHhhhhhhccCCCCCCCcCCCccEEEEcCCCCCCCCCCCCccccccC
Q 011157 216 YLVKNGQVLQFVKMLREKGKKLFLLTNSPYYFVDGGMRFMLEDSTGYTDSWRELFDVVIAQANKPDFYTSDHPFRCYDTE 295 (492)
Q Consensus 216 Yi~k~p~l~~~L~~Lk~~GkklfL~TNS~~~y~~~vm~~l~~~~~~~g~~w~~yFD~iI~~a~KP~FF~~~~pfr~vd~~ 295 (492)
.+...|++.++|++|+++|++++++||++..++...++.+ +|.++||.|++.. +..
T Consensus 73 ~~~~~~g~~~~L~~L~~~g~~~~i~Sn~~~~~~~~~l~~~---------~l~~~f~~i~~~~---------------~~~ 128 (205)
T TIGR01454 73 EVEVFPGVPELLAELRADGVGTAIATGKSGPRARSLLEAL---------GLLPLFDHVIGSD---------------EVP 128 (205)
T ss_pred ccccCCCHHHHHHHHHHCCCeEEEEeCCchHHHHHHHHHc---------CChhheeeEEecC---------------cCC
Confidence 3567799999999999999999999999999999999874 8999999988765 233
Q ss_pred cCccccccccccCCCeeeccCCHHHHHHHhCCCCCcEEEEcccccccccccccCCcEEEEEecc
Q 011157 296 KDTLAFTKVDAFIPNKIYYHGCLKSFLQITKWNGPEVIYFGDHLFSDLRGPSKAGWRTAAIIHE 359 (492)
Q Consensus 296 ~gk~~~~~~~~l~~~~vY~~G~~~~~~~~lg~~~~~vLyvGDhi~gDI~~ak~~GwrT~~VvpE 359 (492)
.+||+ +++|.. +++.+|+++++|+||||+. .||.+|+++|+++++|...
T Consensus 129 ~~KP~---------~~~~~~-----~~~~~~~~~~~~l~igD~~-~Di~aA~~~Gi~~i~~~~g 177 (205)
T TIGR01454 129 RPKPA---------PDIVRE-----ALRLLDVPPEDAVMVGDAV-TDLASARAAGTATVAALWG 177 (205)
T ss_pred CCCCC---------hHHHHH-----HHHHcCCChhheEEEcCCH-HHHHHHHHcCCeEEEEEec
Confidence 34454 666665 9999999999999999997 6899999999999999643
No 40
>PRK06698 bifunctional 5'-methylthioadenosine/S-adenosylhomocysteine nucleosidase/phosphatase; Validated
Probab=99.27 E-value=4e-11 Score=128.87 Aligned_cols=101 Identities=11% Similarity=0.157 Sum_probs=82.7
Q ss_pred hccchhHHHHHHHHHHcCCeEEEEeCCChHHHHHhhhhhhccCCCCCCCcCCCccEEEEcCCCCCCCCCCCCccccccCc
Q 011157 217 LVKNGQVLQFVKMLREKGKKLFLLTNSPYYFVDGGMRFMLEDSTGYTDSWRELFDVVIAQANKPDFYTSDHPFRCYDTEK 296 (492)
Q Consensus 217 i~k~p~l~~~L~~Lk~~GkklfL~TNS~~~y~~~vm~~l~~~~~~~g~~w~~yFD~iI~~a~KP~FF~~~~pfr~vd~~~ 296 (492)
+...|++.++|+.||+.|++++|+||++.+++...++++ +|.+|||.|++.. |+.
T Consensus 329 ~~l~pG~~e~L~~Lk~~g~~l~IvS~~~~~~~~~~l~~~---------~l~~~f~~i~~~d---------------~v~- 383 (459)
T PRK06698 329 GALYPNVKEIFTYIKENNCSIYIASNGLTEYLRAIVSYY---------DLDQWVTETFSIE---------------QIN- 383 (459)
T ss_pred CCcCCCHHHHHHHHHHCCCeEEEEeCCchHHHHHHHHHC---------CcHhhcceeEecC---------------CCC-
Confidence 345689999999999999999999999999999999984 8999999998876 221
Q ss_pred CccccccccccCCCeeeccCCHHHHHHHhCCCCCcEEEEcccccccccccccCCcEEEEEecc
Q 011157 297 DTLAFTKVDAFIPNKIYYHGCLKSFLQITKWNGPEVIYFGDHLFSDLRGPSKAGWRTAAIIHE 359 (492)
Q Consensus 297 gk~~~~~~~~l~~~~vY~~G~~~~~~~~lg~~~~~vLyvGDhi~gDI~~ak~~GwrT~~VvpE 359 (492)
++++ |++|.. +++.+ .+++|+||||+. .||.+|+++|++|++|...
T Consensus 384 ~~~k---------P~~~~~-----al~~l--~~~~~v~VGDs~-~Di~aAk~AG~~~I~v~~~ 429 (459)
T PRK06698 384 SLNK---------SDLVKS-----ILNKY--DIKEAAVVGDRL-SDINAAKDNGLIAIGCNFD 429 (459)
T ss_pred CCCC---------cHHHHH-----HHHhc--CcceEEEEeCCH-HHHHHHHHCCCeEEEEeCC
Confidence 1222 555544 66655 578999999998 6699999999999999654
No 41
>TIGR02254 YjjG/YfnB HAD superfamily (subfamily IA) hydrolase, TIGR02254. This family is a member of the haloacid dehalogenase (HAD) superfamily of hydrolases which are characterized by three conserved sequence motifs. By virtue of an alpha helical domain in-between the first and second conserved motif, this family is a member of subfamily IA (TIGR01549). Most likely, these enzymes are phosphatases.
Probab=99.18 E-value=3.2e-11 Score=115.51 Aligned_cols=104 Identities=21% Similarity=0.286 Sum_probs=89.8
Q ss_pred hccchhHHHHHHHHHHcCCeEEEEeCCChHHHHHhhhhhhccCCCCCCCcCCCccEEEEcCCCCCCCCCCCCccccccCc
Q 011157 217 LVKNGQVLQFVKMLREKGKKLFLLTNSPYYFVDGGMRFMLEDSTGYTDSWRELFDVVIAQANKPDFYTSDHPFRCYDTEK 296 (492)
Q Consensus 217 i~k~p~l~~~L~~Lk~~GkklfL~TNS~~~y~~~vm~~l~~~~~~~g~~w~~yFD~iI~~a~KP~FF~~~~pfr~vd~~~ 296 (492)
+...|++.++|++||+. ++++++||+..+.+...++.+ +|..+||.|++++ +...
T Consensus 96 ~~~~~g~~~~L~~l~~~-~~~~i~Sn~~~~~~~~~l~~~---------~l~~~fd~i~~~~---------------~~~~ 150 (224)
T TIGR02254 96 HQLLPGAFELMENLQQK-FRLYIVTNGVRETQYKRLRKS---------GLFPFFDDIFVSE---------------DAGI 150 (224)
T ss_pred CeeCccHHHHHHHHHhc-CcEEEEeCCchHHHHHHHHHC---------CcHhhcCEEEEcC---------------ccCC
Confidence 34568999999999999 999999999999999998873 8999999999877 3333
Q ss_pred CccccccccccCCCeeeccCCHHHHHHHh-CCCCCcEEEEcccccccccccccCCcEEEEEecc
Q 011157 297 DTLAFTKVDAFIPNKIYYHGCLKSFLQIT-KWNGPEVIYFGDHLFSDLRGPSKAGWRTAAIIHE 359 (492)
Q Consensus 297 gk~~~~~~~~l~~~~vY~~G~~~~~~~~l-g~~~~~vLyvGDhi~gDI~~ak~~GwrT~~VvpE 359 (492)
.||. |++|.. +++.+ |+++++|+||||+...||.+|+++||.++.+...
T Consensus 151 ~KP~---------~~~~~~-----~~~~~~~~~~~~~v~igD~~~~di~~A~~~G~~~i~~~~~ 200 (224)
T TIGR02254 151 QKPD---------KEIFNY-----ALERMPKFSKEEVLMIGDSLTADIKGGQNAGLDTCWMNPD 200 (224)
T ss_pred CCCC---------HHHHHH-----HHHHhcCCCchheEEECCCcHHHHHHHHHCCCcEEEECCC
Confidence 4555 667766 99999 9999999999999988899999999999998654
No 42
>TIGR02247 HAD-1A3-hyp Epoxide hydrolase N-terminal domain-like phosphatase. These appear to be members of the haloacid dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases by general homology and the conservation of all of the recognized catalytic motifs (although the first motif is unusual in the replacement of the more common aspartate with glycine...). The variable domain is found in between motifs 1 and 2, indicating membership in subfamily I and phylogeny and prediction of the alpha helical nature of the variable domain (by PSI-PRED) indicate membership in subfamily IA.
Probab=99.17 E-value=2.6e-11 Score=116.04 Aligned_cols=105 Identities=19% Similarity=0.173 Sum_probs=81.5
Q ss_pred hccchhHHHHHHHHHHcCCeEEEEeCCChHHHHHhhhhhhccCCCCCCCcCCCccEEEEcCCCCCCCCCCCCccccccCc
Q 011157 217 LVKNGQVLQFVKMLREKGKKLFLLTNSPYYFVDGGMRFMLEDSTGYTDSWRELFDVVIAQANKPDFYTSDHPFRCYDTEK 296 (492)
Q Consensus 217 i~k~p~l~~~L~~Lk~~GkklfL~TNS~~~y~~~vm~~l~~~~~~~g~~w~~yFD~iI~~a~KP~FF~~~~pfr~vd~~~ 296 (492)
+...|++.++|+.||++|++++++||+............ ..++.++||.|+++. ++..
T Consensus 93 ~~~~~~~~~~L~~L~~~g~~l~i~Sn~~~~~~~~~~~~~-------~~~l~~~fd~v~~s~---------------~~~~ 150 (211)
T TIGR02247 93 TKLRPSMMAAIKTLRAKGFKTACITNNFPTDHSAEEALL-------PGDIMALFDAVVESC---------------LEGL 150 (211)
T ss_pred cccChhHHHHHHHHHHCCCeEEEEeCCCCccchhhhHhh-------hhhhHhhCCEEEEee---------------ecCC
Confidence 345689999999999999999999999765432221111 236889999998765 3333
Q ss_pred CccccccccccCCCeeeccCCHHHHHHHhCCCCCcEEEEcccccccccccccCCcEEEEEec
Q 011157 297 DTLAFTKVDAFIPNKIYYHGCLKSFLQITKWNGPEVIYFGDHLFSDLRGPSKAGWRTAAIIH 358 (492)
Q Consensus 297 gk~~~~~~~~l~~~~vY~~G~~~~~~~~lg~~~~~vLyvGDhi~gDI~~ak~~GwrT~~Vvp 358 (492)
.||. |++|.. +++.+|+++++|+||||... ||.+|+++||+|++|.+
T Consensus 151 ~KP~---------p~~~~~-----~~~~~g~~~~~~l~i~D~~~-di~aA~~aG~~~i~v~~ 197 (211)
T TIGR02247 151 RKPD---------PRIYQL-----MLERLGVAPEECVFLDDLGS-NLKPAAALGITTIKVSD 197 (211)
T ss_pred CCCC---------HHHHHH-----HHHHcCCCHHHeEEEcCCHH-HHHHHHHcCCEEEEECC
Confidence 4555 777766 99999999999999988755 59999999999999964
No 43
>TIGR01662 HAD-SF-IIIA HAD-superfamily hydrolase, subfamily IIIA. In the case of histidinol phosphatase and PNK-3'-phosphatase, this model represents a domain of a bifunctional system. In the histidinol phosphatase HisB, a C-terminal domain is an imidazoleglycerol-phosphate dehydratase which catalyzes a related step in histidine biosynthesis. In PNK-3'-phosphatase, N- and C-terminal domains constitute the polynucleotide kinase and DNA-binding components of the enzyme.
Probab=99.17 E-value=5.6e-11 Score=105.75 Aligned_cols=104 Identities=19% Similarity=0.233 Sum_probs=80.1
Q ss_pred ccchhccchhHHHHHHHHHHcCCeEEEEeCCC--------hHHHHHhhhhhhccCCCCCCCcCCCccEEEEcCCCCCCCC
Q 011157 213 PNRYLVKNGQVLQFVKMLREKGKKLFLLTNSP--------YYFVDGGMRFMLEDSTGYTDSWRELFDVVIAQANKPDFYT 284 (492)
Q Consensus 213 p~kYi~k~p~l~~~L~~Lk~~GkklfL~TNS~--------~~y~~~vm~~l~~~~~~~g~~w~~yFD~iI~~a~KP~FF~ 284 (492)
+.......|++.++|+.|+++|++++++||++ .+.+...++.+ ++. |+.+++.. +
T Consensus 20 ~~~~~~~~~~v~~~l~~L~~~g~~l~i~Sn~~~~~~~~~~~~~~~~~l~~~---------~l~--~~~~~~~~-~----- 82 (132)
T TIGR01662 20 DEDERILYPEVPDALAELKEAGYKVVIVTNQSGIGRGKFSSGRVARRLEEL---------GVP--IDVLYACP-H----- 82 (132)
T ss_pred CHHHheeCCCHHHHHHHHHHCCCEEEEEECCccccccHHHHHHHHHHHHHC---------CCC--EEEEEECC-C-----
Confidence 34445667999999999999999999999999 78888888774 332 44444333 0
Q ss_pred CCCCccccccCcCccccccccccCCCeeeccCCHHHHHHHh-CCCCCcEEEEcccccccccccccCCcEEEEEec
Q 011157 285 SDHPFRCYDTEKDTLAFTKVDAFIPNKIYYHGCLKSFLQIT-KWNGPEVIYFGDHLFSDLRGPSKAGWRTAAIIH 358 (492)
Q Consensus 285 ~~~pfr~vd~~~gk~~~~~~~~l~~~~vY~~G~~~~~~~~l-g~~~~~vLyvGDhi~gDI~~ak~~GwrT~~Vvp 358 (492)
. .||. +++|.. +++.+ ++++++|+||||+...||.+|+++||+|++|.|
T Consensus 83 ~-----------~KP~---------~~~~~~-----~~~~~~~~~~~~~v~IGD~~~~Di~~A~~~Gi~~i~~~~ 132 (132)
T TIGR01662 83 C-----------RKPK---------PGMFLE-----ALKRFNEIDPEESVYVGDQDLTDLQAAKRAGLAFILVAP 132 (132)
T ss_pred C-----------CCCC---------hHHHHH-----HHHHcCCCChhheEEEcCCCcccHHHHHHCCCeEEEeeC
Confidence 0 1222 555555 99999 599999999999777889999999999999865
No 44
>TIGR01993 Pyr-5-nucltdase pyrimidine 5'-nucleotidase. These enzymes are members of the haloacid dehalogenase (HAD) superfamily of hydrolases, specifically the IA subfamily (variant 3, TIGR01509).
Probab=99.16 E-value=3.4e-11 Score=112.96 Aligned_cols=99 Identities=13% Similarity=0.205 Sum_probs=83.2
Q ss_pred hhccchhHHHHHHHHHHcCCeEEEEeCCChHHHHHhhhhhhccCCCCCCCcCCCccEEEEcCCCCCCCCCCCCccccccC
Q 011157 216 YLVKNGQVLQFVKMLREKGKKLFLLTNSPYYFVDGGMRFMLEDSTGYTDSWRELFDVVIAQANKPDFYTSDHPFRCYDTE 295 (492)
Q Consensus 216 Yi~k~p~l~~~L~~Lk~~GkklfL~TNS~~~y~~~vm~~l~~~~~~~g~~w~~yFD~iI~~a~KP~FF~~~~pfr~vd~~ 295 (492)
.+.+.|++.++|++|+ ++++++||++...+...++.+ ++.++||.|++.+ ++.
T Consensus 82 ~~~~~~g~~~~L~~L~---~~~~i~Tn~~~~~~~~~l~~~---------gl~~~fd~i~~~~---------------~~~ 134 (184)
T TIGR01993 82 KLKPDPELRNLLLRLP---GRKIIFTNGDRAHARRALNRL---------GIEDCFDGIFCFD---------------TAN 134 (184)
T ss_pred hCCCCHHHHHHHHhCC---CCEEEEeCCCHHHHHHHHHHc---------CcHhhhCeEEEee---------------ccc
Confidence 3557789999999997 479999999999999999874 7899999999887 222
Q ss_pred c----CccccccccccCCCeeeccCCHHHHHHHhCCCCCcEEEEcccccccccccccCCcEEEEE
Q 011157 296 K----DTLAFTKVDAFIPNKIYYHGCLKSFLQITKWNGPEVIYFGDHLFSDLRGPSKAGWRTAAI 356 (492)
Q Consensus 296 ~----gk~~~~~~~~l~~~~vY~~G~~~~~~~~lg~~~~~vLyvGDhi~gDI~~ak~~GwrT~~V 356 (492)
. .||. |++|.. +++.+|+.+++|++|||+.. ||.+|+++||+|++|
T Consensus 135 ~~~~~~KP~---------p~~~~~-----~~~~~~~~~~~~l~vgD~~~-di~aA~~~G~~~i~v 184 (184)
T TIGR01993 135 PDYLLPKPS---------PQAYEK-----ALREAGVDPERAIFFDDSAR-NIAAAKALGMKTVLV 184 (184)
T ss_pred CccCCCCCC---------HHHHHH-----HHHHhCCCccceEEEeCCHH-HHHHHHHcCCEEeeC
Confidence 2 2444 677777 99999999999999999975 699999999999875
No 45
>KOG3109 consensus Haloacid dehalogenase-like hydrolase [General function prediction only]
Probab=99.11 E-value=1.1e-09 Score=105.77 Aligned_cols=193 Identities=18% Similarity=0.247 Sum_probs=136.1
Q ss_pred CccEEEEeccccccccccchHHHHHHHHHHHHHHhcCCCccccCCCCCCCCcccceeeecCCCeEEEecCCCceeecccc
Q 011157 47 NIQVYGFDYDYTLAHYSSNLQSLIYDLAKEHMVNEFRYPEVCISFKYDPNFPIRGLYYDKQKGCLLKLDFFGSIEPDGCY 126 (492)
Q Consensus 47 ~i~~iGFDmDyTLa~Y~~~~~~l~y~~~~~~LV~~~gYP~~ll~~~~d~~f~~RGLv~D~~~GnlLKvd~~g~I~~~~~~ 126 (492)
+++|+-||+|-||+.=+...+.+.=+.+.+++|+++|.|++
T Consensus 14 ~~~~l~FDiDdtLYp~St~i~~~~~~nI~~f~~eklgi~~e--------------------------------------- 54 (244)
T KOG3109|consen 14 NYKCLFFDIDDTLYPLSTGIQLMMRNNIQEFFVEKLGISEE--------------------------------------- 54 (244)
T ss_pred cceEEEEecccccccCchhHHHHHHHHHHHHHHHHhCCChh---------------------------------------
Confidence 89999999999998888888888888888999999999986
Q ss_pred cCCCCCCHHHHHHHhCCcccccCccCCccccccccchhHHHHHHHHHHHhhhcCCCCChhhHHHHHHHHHHHhhhhhhhH
Q 011157 127 FGRRKLSRKEIAEIYGTRHIGRDQARGLVGLMDFFCFTEACLIADIVQYFVDAKLEFDASYIYEDVNRAIQHVHRRGLVH 206 (492)
Q Consensus 127 hG~~~ls~~ei~~~Y~~~~i~~~~~~~~~~l~dlF~lpe~~L~a~lvd~~~~~~~~~~~~~l~~DV~~av~~vh~~G~lk 206 (492)
|-.+|. ++....||- .+|.++- .+..+|+..-+ ..||..
T Consensus 55 -~a~~L~-~~~yk~YG~------------------------t~aGL~~----~~~~~d~deY~-------~~V~~~---- 93 (244)
T KOG3109|consen 55 -EAEELR-ESLYKEYGL------------------------TMAGLKA----VGYIFDADEYH-------RFVHGR---- 93 (244)
T ss_pred -hhHHHH-HHHHHHHhH------------------------HHHHHHH----hcccCCHHHHH-------HHhhcc----
Confidence 101121 122333431 1222211 11111111111 123322
Q ss_pred HHHhcCccchhccchhHHHHHHHHHHcCCeEEEEeCCChHHHHHhhhhhhccCCCCCCCcCCCccEEEEcCC-CCCCCCC
Q 011157 207 RGILSDPNRYLVKNGQVLQFVKMLREKGKKLFLLTNSPYYFVDGGMRFMLEDSTGYTDSWRELFDVVIAQAN-KPDFYTS 285 (492)
Q Consensus 207 ~~v~~np~kYi~k~p~l~~~L~~Lk~~GkklfL~TNS~~~y~~~vm~~l~~~~~~~g~~w~~yFD~iI~~a~-KP~FF~~ 285 (492)
.|-.+|.||+.|+++|-.||..+ ..+-||++...+.++++.| +..|.||.||+... -|.
T Consensus 94 -----LPlq~LkPD~~LRnlLL~l~~r~--k~~FTNa~k~HA~r~Lk~L---------GieDcFegii~~e~~np~---- 153 (244)
T KOG3109|consen 94 -----LPLQDLKPDPVLRNLLLSLKKRR--KWIFTNAYKVHAIRILKKL---------GIEDCFEGIICFETLNPI---- 153 (244)
T ss_pred -----CcHhhcCCCHHHHHHHHhCcccc--EEEecCCcHHHHHHHHHHh---------ChHHhccceeEeeccCCC----
Confidence 57777899999999999999886 5778999999999999996 88999999998772 010
Q ss_pred CCCccccccCcCccccccccccCCCeeeccCCHHHHHHHhCCC-CCcEEEEcccccccccccccCCcEEEEEeccc
Q 011157 286 DHPFRCYDTEKDTLAFTKVDAFIPNKIYYHGCLKSFLQITKWN-GPEVIYFGDHLFSDLRGPSKAGWRTAAIIHEL 360 (492)
Q Consensus 286 ~~pfr~vd~~~gk~~~~~~~~l~~~~vY~~G~~~~~~~~lg~~-~~~vLyvGDhi~gDI~~ak~~GwrT~~VvpEl 360 (492)
.+||. -||. .+.++.+.+..|+. +.+++.|.|++.. |.+|++.||+|++|-.|-
T Consensus 154 ~~~~v------cKP~--------------~~afE~a~k~agi~~p~~t~FfDDS~~N-I~~ak~vGl~tvlv~~~~ 208 (244)
T KOG3109|consen 154 EKTVV------CKPS--------------EEAFEKAMKVAGIDSPRNTYFFDDSERN-IQTAKEVGLKTVLVGREH 208 (244)
T ss_pred CCcee------ecCC--------------HHHHHHHHHHhCCCCcCceEEEcCchhh-HHHHHhccceeEEEEeee
Confidence 01220 1222 24456799999998 9999999999999 989999999999996543
No 46
>PLN02811 hydrolase
Probab=99.06 E-value=2.5e-10 Score=110.51 Aligned_cols=104 Identities=17% Similarity=0.191 Sum_probs=83.6
Q ss_pred cchhHHHHHHHHHHcCCeEEEEeCCChHHHHH-hhhhhhccCCCCCCCcCCCccEEEEcCCCCCCCCCCCCccccccCcC
Q 011157 219 KNGQVLQFVKMLREKGKKLFLLTNSPYYFVDG-GMRFMLEDSTGYTDSWRELFDVVIAQANKPDFYTSDHPFRCYDTEKD 297 (492)
Q Consensus 219 k~p~l~~~L~~Lk~~GkklfL~TNS~~~y~~~-vm~~l~~~~~~~g~~w~~yFD~iI~~a~KP~FF~~~~pfr~vd~~~g 297 (492)
.-|++.++|+.|++.|++++|+||+....+.. ..++ .+|.++||.|++... | ++..+
T Consensus 79 l~~gv~e~l~~L~~~g~~~~i~S~~~~~~~~~~~~~~---------~~l~~~f~~i~~~~~-~------------~~~~~ 136 (220)
T PLN02811 79 LMPGAERLVRHLHAKGIPIAIATGSHKRHFDLKTQRH---------GELFSLMHHVVTGDD-P------------EVKQG 136 (220)
T ss_pred CCccHHHHHHHHHHCCCcEEEEeCCchhhHHHHHccc---------HHHHhhCCEEEECCh-h------------hccCC
Confidence 45899999999999999999999998865543 3322 368899999988761 0 23345
Q ss_pred ccccccccccCCCeeeccCCHHHHHHHhC---CCCCcEEEEcccccccccccccCCcEEEEEecc
Q 011157 298 TLAFTKVDAFIPNKIYYHGCLKSFLQITK---WNGPEVIYFGDHLFSDLRGPSKAGWRTAAIIHE 359 (492)
Q Consensus 298 k~~~~~~~~l~~~~vY~~G~~~~~~~~lg---~~~~~vLyvGDhi~gDI~~ak~~GwrT~~VvpE 359 (492)
||. |++|.. +++.+| +++++|+||||+.. |+.+|+++|++|++|...
T Consensus 137 KP~---------p~~~~~-----a~~~~~~~~~~~~~~v~IgDs~~-di~aA~~aG~~~i~v~~~ 186 (220)
T PLN02811 137 KPA---------PDIFLA-----AARRFEDGPVDPGKVLVFEDAPS-GVEAAKNAGMSVVMVPDP 186 (220)
T ss_pred CCC---------cHHHHH-----HHHHhCCCCCCccceEEEeccHh-hHHHHHHCCCeEEEEeCC
Confidence 565 888887 999996 99999999999996 599999999999999543
No 47
>PHA02597 30.2 hypothetical protein; Provisional
Probab=99.06 E-value=3.6e-10 Score=107.13 Aligned_cols=102 Identities=14% Similarity=0.120 Sum_probs=72.9
Q ss_pred hccchhHHHHHHHHHHcCCeEEEEeCCChHHHHHhhhhhhccCCCCCCCcCCCccEEEEcCCCCCCCCCCCCccccccCc
Q 011157 217 LVKNGQVLQFVKMLREKGKKLFLLTNSPYYFVDGGMRFMLEDSTGYTDSWRELFDVVIAQANKPDFYTSDHPFRCYDTEK 296 (492)
Q Consensus 217 i~k~p~l~~~L~~Lk~~GkklfL~TNS~~~y~~~vm~~l~~~~~~~g~~w~~yFD~iI~~a~KP~FF~~~~pfr~vd~~~ 296 (492)
+..-|++.++|++|++.+ +++++||.+.......+..+ +-..-|.++|+.|++.+.
T Consensus 73 ~~~~pG~~e~L~~L~~~~-~~~i~Tn~~~~~~~~~~~~~-----~l~~~f~~~f~~i~~~~~------------------ 128 (197)
T PHA02597 73 LSAYDDALDVINKLKEDY-DFVAVTALGDSIDALLNRQF-----NLNALFPGAFSEVLMCGH------------------ 128 (197)
T ss_pred ccCCCCHHHHHHHHHhcC-CEEEEeCCccchhHHHHhhC-----CHHHhCCCcccEEEEecc------------------
Confidence 446789999999999986 57888987766555454432 001122346777776652
Q ss_pred CccccccccccCCCeeeccCCHHHHHHHhCCCCCcEEEEcccccccccccccC--CcEEEEEecc
Q 011157 297 DTLAFTKVDAFIPNKIYYHGCLKSFLQITKWNGPEVIYFGDHLFSDLRGPSKA--GWRTAAIIHE 359 (492)
Q Consensus 297 gk~~~~~~~~l~~~~vY~~G~~~~~~~~lg~~~~~vLyvGDhi~gDI~~ak~~--GwrT~~VvpE 359 (492)
.+++ |++|.. +++.+| +++|+||||+..+ +.+|+++ ||+|+.|...
T Consensus 129 ~~~k---------p~~~~~-----a~~~~~--~~~~v~vgDs~~d-i~aA~~a~~Gi~~i~~~~~ 176 (197)
T PHA02597 129 DESK---------EKLFIK-----AKEKYG--DRVVCFVDDLAHN-LDAAHEALSQLPVIHMLRG 176 (197)
T ss_pred Cccc---------HHHHHH-----HHHHhC--CCcEEEeCCCHHH-HHHHHHHHcCCcEEEecch
Confidence 0111 455555 899998 7889999999999 9999998 9999999655
No 48
>TIGR01691 enolase-ppase 2,3-diketo-5-methylthio-1-phosphopentane phosphatase. This enzyme is the enolase-phosphatase of methionine salvage, a pathway that regenerates methionine from methylthioadenosine (MTA). Adenosylmethionine (AdoMet) is a donor of different moieties for various processes, including methylation reactions. Use of AdoMet for spermidine biosynthesis, which leads to polyamine biosynthesis, leaves MTA as a by-product that must be cleared. In Bacillus subtilis and related species, this single protein is replaced by separate enzymes with enolase and phosphatase activities.
Probab=99.03 E-value=5.4e-10 Score=109.42 Aligned_cols=106 Identities=11% Similarity=0.064 Sum_probs=82.3
Q ss_pred hccchhHHHHHHHHHHcCCeEEEEeCCChHHHHHhhhhhhccCCCCCCCcCCCccEEEEcCCCCCCCCCCCCccccccCc
Q 011157 217 LVKNGQVLQFVKMLREKGKKLFLLTNSPYYFVDGGMRFMLEDSTGYTDSWRELFDVVIAQANKPDFYTSDHPFRCYDTEK 296 (492)
Q Consensus 217 i~k~p~l~~~L~~Lk~~GkklfL~TNS~~~y~~~vm~~l~~~~~~~g~~w~~yFD~iI~~a~KP~FF~~~~pfr~vd~~~ 296 (492)
...-|++.++|++|+++|++++++||++...+..++.+.- ..++.+|||.++... ..
T Consensus 94 ~~lypgv~e~L~~Lk~~G~~l~I~Sn~s~~~~~~~~~~~~------~~~L~~~f~~~fd~~-----------------~g 150 (220)
T TIGR01691 94 SHLYPDVPPALEAWLQLGLRLAVYSSGSVPAQKLLFGHSD------AGNLTPYFSGYFDTT-----------------VG 150 (220)
T ss_pred cCcCcCHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHhhcc------ccchhhhcceEEEeC-----------------cc
Confidence 3456899999999999999999999999999998887631 125666666543211 01
Q ss_pred CccccccccccCCCeeeccCCHHHHHHHhCCCCCcEEEEcccccccccccccCCcEEEEEeccc
Q 011157 297 DTLAFTKVDAFIPNKIYYHGCLKSFLQITKWNGPEVIYFGDHLFSDLRGPSKAGWRTAAIIHEL 360 (492)
Q Consensus 297 gk~~~~~~~~l~~~~vY~~G~~~~~~~~lg~~~~~vLyvGDhi~gDI~~ak~~GwrT~~VvpEl 360 (492)
.|+. +++|.. +++.+|+++++||+|||+. .||.+|+++||+|++|...-
T Consensus 151 ~KP~---------p~~y~~-----i~~~lgv~p~e~lfVgDs~-~Di~AA~~AG~~ti~v~r~g 199 (220)
T TIGR01691 151 LKTE---------AQSYVK-----IAGQLGSPPREILFLSDII-NELDAARKAGLHTGQLVRPG 199 (220)
T ss_pred cCCC---------HHHHHH-----HHHHhCcChhHEEEEeCCH-HHHHHHHHcCCEEEEEECCC
Confidence 2333 666666 9999999999999999996 66999999999999998654
No 49
>TIGR01685 MDP-1 magnesium-dependent phosphatase-1. This model represents two closely related clades of sequences from eukaryotes and archaea. The mouse enzyme has been characterized as a phosphatase and has been positively identified as a member of the haloacid dehalogenase (HAD) superfamily by site-directed mutagenesis of the active site residues.
Probab=99.02 E-value=2.2e-10 Score=108.35 Aligned_cols=104 Identities=13% Similarity=0.116 Sum_probs=80.4
Q ss_pred hccchhHHHHHHHHHHcCCeEEEEeCC-ChHHHHHhhhhhhccCCCCCCCcC---------CCccEEEEcCCCCCCCCCC
Q 011157 217 LVKNGQVLQFVKMLREKGKKLFLLTNS-PYYFVDGGMRFMLEDSTGYTDSWR---------ELFDVVIAQANKPDFYTSD 286 (492)
Q Consensus 217 i~k~p~l~~~L~~Lk~~GkklfL~TNS-~~~y~~~vm~~l~~~~~~~g~~w~---------~yFD~iI~~a~KP~FF~~~ 286 (492)
+..-|++.++|+.|+++|++++++||+ ...++..+|.++ ++. +|||.|++... | ..
T Consensus 44 ~~l~pGv~elL~~Lk~~G~~l~I~Sn~~~~~~~~~~L~~~---------~l~~~~~~~~~~~~Fd~iv~~~~-~---~~- 109 (174)
T TIGR01685 44 VTLIKEVRDVLQTLKDAGTYLATASWNDVPEWAYEILGTF---------EITYAGKTVPMHSLFDDRIEIYK-P---NK- 109 (174)
T ss_pred EEEcccHHHHHHHHHHCCCEEEEEeCCCChHHHHHHHHhC---------CcCCCCCcccHHHhceeeeeccC-C---ch-
Confidence 344589999999999999999999999 999999999874 566 99999999762 2 00
Q ss_pred CCccccccCcCccccccccccCCCeeeccCCHHHHHHHh--CCCCCcEEEEcccccccccccccCCcEEEEEecc
Q 011157 287 HPFRCYDTEKDTLAFTKVDAFIPNKIYYHGCLKSFLQIT--KWNGPEVIYFGDHLFSDLRGPSKAGWRTAAIIHE 359 (492)
Q Consensus 287 ~pfr~vd~~~gk~~~~~~~~l~~~~vY~~G~~~~~~~~l--g~~~~~vLyvGDhi~gDI~~ak~~GwrT~~VvpE 359 (492)
.++. +.++. .+.+.. |+++++|+||||+..+ |.+|+++|++|++|...
T Consensus 110 ----------~kp~---------~~i~~-----~~~~~~~~gl~p~e~l~VgDs~~d-i~aA~~aGi~~i~v~~g 159 (174)
T TIGR01685 110 ----------AKQL---------EMILQ-----KVNKVDPSVLKPAQILFFDDRTDN-VREVWGYGVTSCYCPSG 159 (174)
T ss_pred ----------HHHH---------HHHHH-----HhhhcccCCCCHHHeEEEcChhHh-HHHHHHhCCEEEEcCCC
Confidence 1111 22222 244444 7999999999999977 99999999999999543
No 50
>TIGR01656 Histidinol-ppas histidinol-phosphate phosphatase family domain. This domain is a member of the haloacid-dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. This superfamily is distinguished by the presence of three motifs: an N-terminal motif containing the nucleophilic aspartate, a central motif containing an conserved serine or threonine, and a C-terminal motif containing a conserved lysine (or arginine) and conserved aspartates. More specifically, the domian modelled here is a member of subfamily III of the HAD-superfamily by virtue of lacking a "capping" domain in either of the two common positions, between motifs 1 and 2, or between motifs 2 and 3.
Probab=99.00 E-value=3.1e-10 Score=103.54 Aligned_cols=104 Identities=16% Similarity=0.164 Sum_probs=74.1
Q ss_pred ccchhHHHHHHHHHHcCCeEEEEeCCCh---------------HHHHHhhhhhhccCCCCCCCcCCCccEEEEcCCCCCC
Q 011157 218 VKNGQVLQFVKMLREKGKKLFLLTNSPY---------------YFVDGGMRFMLEDSTGYTDSWRELFDVVIAQANKPDF 282 (492)
Q Consensus 218 ~k~p~l~~~L~~Lk~~GkklfL~TNS~~---------------~y~~~vm~~l~~~~~~~g~~w~~yFD~iI~~a~KP~F 282 (492)
...|++.++|+.|+++|++++++||++. ..+..+++.+ ++. |+.++.....|.
T Consensus 27 ~~~~g~~~~l~~Lk~~g~~~~I~Sn~~~~~~~~~~~~~~~~~~~~~~~~l~~~---------~l~--~~~~~~~~~~~~- 94 (147)
T TIGR01656 27 QLRPGAVPALLTLRAAGYTVVVVTNQSGIGRGYFSAEAFRAPNGRVLELLRQL---------GVA--VDGVLFCPHHPA- 94 (147)
T ss_pred EEcCChHHHHHHHHHCCCEEEEEeCCCcccCCcCCHHHHHHHHHHHHHHHHhC---------CCc--eeEEEECCCCCC-
Confidence 4578999999999999999999999884 4555556553 332 222222110000
Q ss_pred CCCCCCccccccCcCccccccccccCCCeeeccCCHHHHHHHhCCCCCcEEEEcccccccccccccCCcEEEEEe
Q 011157 283 YTSDHPFRCYDTEKDTLAFTKVDAFIPNKIYYHGCLKSFLQITKWNGPEVIYFGDHLFSDLRGPSKAGWRTAAII 357 (492)
Q Consensus 283 F~~~~pfr~vd~~~gk~~~~~~~~l~~~~vY~~G~~~~~~~~lg~~~~~vLyvGDhi~gDI~~ak~~GwrT~~Vv 357 (492)
-+....||. +++|.. +++.+|+++++|+||||+ ..||.+|+++||+|++|.
T Consensus 95 ---------~~~~~~KP~---------~~~~~~-----~~~~~~~~~~e~i~IGDs-~~Di~~A~~~Gi~~v~i~ 145 (147)
T TIGR01656 95 ---------DNCSCRKPK---------PGLILE-----ALKRLGVDASRSLVVGDR-LRDLQAARNAGLAAVLLV 145 (147)
T ss_pred ---------CCCCCCCCC---------HHHHHH-----HHHHcCCChHHEEEEcCC-HHHHHHHHHCCCCEEEec
Confidence 011122444 666666 999999999999999999 778999999999999985
No 51
>TIGR01668 YqeG_hyp_ppase HAD superfamily (subfamily IIIA) phosphatase, TIGR01668. This family consists of sequences from fungi, plants, cyanobacteria, gram-positive bacteria and Deinococcus. There is presently no characterization of any sequence in this family.
Probab=98.99 E-value=8.9e-10 Score=103.30 Aligned_cols=98 Identities=18% Similarity=0.254 Sum_probs=76.3
Q ss_pred ccchhHHHHHHHHHHcCCeEEEEeCCC-hHHHHHhhhhhhccCCCCCCCcCCCccEEEEcCCCCCCCCCCCCccccccCc
Q 011157 218 VKNGQVLQFVKMLREKGKKLFLLTNSP-YYFVDGGMRFMLEDSTGYTDSWRELFDVVIAQANKPDFYTSDHPFRCYDTEK 296 (492)
Q Consensus 218 ~k~p~l~~~L~~Lk~~GkklfL~TNS~-~~y~~~vm~~l~~~~~~~g~~w~~yFD~iI~~a~KP~FF~~~~pfr~vd~~~ 296 (492)
...|++.++|+.|++.|++++++||++ ...+..+.+.+ ++..+ ....||
T Consensus 43 ~~~pgv~e~L~~Lk~~g~~l~I~Sn~~~~~~~~~~~~~~---------gl~~~-----~~~~KP---------------- 92 (170)
T TIGR01668 43 EAYPALRDWIEELKAAGRKLLIVSNNAGEQRAKAVEKAL---------GIPVL-----PHAVKP---------------- 92 (170)
T ss_pred CcChhHHHHHHHHHHcCCEEEEEeCCchHHHHHHHHHHc---------CCEEE-----cCCCCC----------------
Confidence 456899999999999999999999998 67666655542 33211 123344
Q ss_pred CccccccccccCCCeeeccCCHHHHHHHhCCCCCcEEEEcccccccccccccCCcEEEEEeccchh
Q 011157 297 DTLAFTKVDAFIPNKIYYHGCLKSFLQITKWNGPEVIYFGDHLFSDLRGPSKAGWRTAAIIHELES 362 (492)
Q Consensus 297 gk~~~~~~~~l~~~~vY~~G~~~~~~~~lg~~~~~vLyvGDhi~gDI~~ak~~GwrT~~VvpEl~~ 362 (492)
. |++|.. +++.+|+++++|+||||+++.||.+|+++||+|++|-+....
T Consensus 93 ---~---------p~~~~~-----~l~~~~~~~~~~l~IGDs~~~Di~aA~~aGi~~i~v~~g~~~ 141 (170)
T TIGR01668 93 ---P---------GCAFRR-----AHPEMGLTSEQVAVVGDRLFTDVMGGNRNGSYTILVEPLVHP 141 (170)
T ss_pred ---C---------hHHHHH-----HHHHcCCCHHHEEEECCcchHHHHHHHHcCCeEEEEccCcCC
Confidence 2 555554 999999999999999999999999999999999999766533
No 52
>PRK06769 hypothetical protein; Validated
Probab=98.98 E-value=4.7e-10 Score=105.46 Aligned_cols=104 Identities=13% Similarity=0.141 Sum_probs=72.7
Q ss_pred ccchhHHHHHHHHHHcCCeEEEEeCCChH---------HHHHhhhhhhccCCCCCCCcCCCccEEEEcCCCCCCCCCCCC
Q 011157 218 VKNGQVLQFVKMLREKGKKLFLLTNSPYY---------FVDGGMRFMLEDSTGYTDSWRELFDVVIAQANKPDFYTSDHP 288 (492)
Q Consensus 218 ~k~p~l~~~L~~Lk~~GkklfL~TNS~~~---------y~~~vm~~l~~~~~~~g~~w~~yFD~iI~~a~KP~FF~~~~p 288 (492)
..-|++.++|++||+.|++++++||++.. +... ++. .++.++|+.++..+.
T Consensus 28 ~~~pgv~e~L~~Lk~~G~~l~I~Tn~~~~~~~~~~~~~~~~~-l~~---------~g~~~~~~~~~~~~~---------- 87 (173)
T PRK06769 28 TLFPFTKASLQKLKANHIKIFSFTNQPGIADGIATIADFVQE-LKG---------FGFDDIYLCPHKHGD---------- 87 (173)
T ss_pred EECCCHHHHHHHHHHCCCEEEEEECCchhcCCcCCHHHHHHH-HHh---------CCcCEEEECcCCCCC----------
Confidence 45689999999999999999999999742 2221 222 133333322221110
Q ss_pred ccccccCcCccccccccccCCCeeeccCCHHHHHHHhCCCCCcEEEEcccccccccccccCCcEEEEEeccc
Q 011157 289 FRCYDTEKDTLAFTKVDAFIPNKIYYHGCLKSFLQITKWNGPEVIYFGDHLFSDLRGPSKAGWRTAAIIHEL 360 (492)
Q Consensus 289 fr~vd~~~gk~~~~~~~~l~~~~vY~~G~~~~~~~~lg~~~~~vLyvGDhi~gDI~~ak~~GwrT~~VvpEl 360 (492)
+....||. |++|.. +++.+|.++++|+||||+. .|+.+|+++||++++|.+.-
T Consensus 88 ----~~~~~KP~---------p~~~~~-----~~~~l~~~p~~~i~IGD~~-~Di~aA~~aGi~~i~v~~g~ 140 (173)
T PRK06769 88 ----GCECRKPS---------TGMLLQ-----AAEKHGLDLTQCAVIGDRW-TDIVAAAKVNATTILVRTGA 140 (173)
T ss_pred ----CCCCCCCC---------HHHHHH-----HHHHcCCCHHHeEEEcCCH-HHHHHHHHCCCeEEEEecCC
Confidence 11223443 656655 9999999999999999997 78999999999999997643
No 53
>KOG3085 consensus Predicted hydrolase (HAD superfamily) [General function prediction only]
Probab=98.97 E-value=4.3e-10 Score=110.90 Aligned_cols=105 Identities=20% Similarity=0.304 Sum_probs=81.7
Q ss_pred ccchhccchhHHHHHHHHHHcCCeEEEEeCCChHHHHHhhhhhhccCCCCCCCcCCCccEEEEcCCCCCCCCCCCCcccc
Q 011157 213 PNRYLVKNGQVLQFVKMLREKGKKLFLLTNSPYYFVDGGMRFMLEDSTGYTDSWRELFDVVIAQANKPDFYTSDHPFRCY 292 (492)
Q Consensus 213 p~kYi~k~p~l~~~L~~Lk~~GkklfL~TNS~~~y~~~vm~~l~~~~~~~g~~w~~yFD~iI~~a~KP~FF~~~~pfr~v 292 (492)
|+-+..-++ +.++|++||+.|..+.++||-+..+= .++. ..+...|||.||+++
T Consensus 109 ~~~~~~~~~-~~~~lq~lR~~g~~l~iisN~d~r~~-~~l~---------~~~l~~~fD~vv~S~--------------- 162 (237)
T KOG3085|consen 109 PSAWKYLDG-MQELLQKLRKKGTILGIISNFDDRLR-LLLL---------PLGLSAYFDFVVESC--------------- 162 (237)
T ss_pred ccCceeccH-HHHHHHHHHhCCeEEEEecCCcHHHH-HHhh---------ccCHHHhhhhhhhhh---------------
Confidence 333444444 44999999999966666666655554 2222 246669999999988
Q ss_pred ccCcCccccccccccCCCeeeccCCHHHHHHHhCCCCCcEEEEcccccccccccccCCcEEEEEe
Q 011157 293 DTEKDTLAFTKVDAFIPNKIYYHGCLKSFLQITKWNGPEVIYFGDHLFSDLRGPSKAGWRTAAII 357 (492)
Q Consensus 293 d~~~gk~~~~~~~~l~~~~vY~~G~~~~~~~~lg~~~~~vLyvGDhi~gDI~~ak~~GwrT~~Vv 357 (492)
.+.--||. |+||+. +++.+|+.|++|++|||....|+.+|+.+||++++|.
T Consensus 163 e~g~~KPD---------p~If~~-----al~~l~v~Pee~vhIgD~l~nD~~gA~~~G~~ailv~ 213 (237)
T KOG3085|consen 163 EVGLEKPD---------PRIFQL-----ALERLGVKPEECVHIGDLLENDYEGARNLGWHAILVD 213 (237)
T ss_pred hhccCCCC---------hHHHHH-----HHHHhCCChHHeEEecCccccccHhHHHcCCEEEEEc
Confidence 34444555 889998 9999999999999999999999999999999999996
No 54
>TIGR01261 hisB_Nterm histidinol-phosphatase. This model describes histidinol phosphatase. All known examples in the scope of this model are bifunctional proteins with a histidinol phosphatase domain followed by an imidazoleglycerol-phosphate dehydratase domain. These enzymatic domains catalyze the ninth and seventh steps, respectively, of histidine biosynthesis.
Probab=98.93 E-value=1.4e-09 Score=101.42 Aligned_cols=110 Identities=20% Similarity=0.203 Sum_probs=80.4
Q ss_pred hhccchhHHHHHHHHHHcCCeEEEEeCCC---------------hHHHHHhhhhhhccCCCCCCCcCCCccEEEEcCCCC
Q 011157 216 YLVKNGQVLQFVKMLREKGKKLFLLTNSP---------------YYFVDGGMRFMLEDSTGYTDSWRELFDVVIAQANKP 280 (492)
Q Consensus 216 Yi~k~p~l~~~L~~Lk~~GkklfL~TNS~---------------~~y~~~vm~~l~~~~~~~g~~w~~yFD~iI~~a~KP 280 (492)
.+...|++.++|++|+++|++++++||.+ ..++..+++.+ ++. ||.+++++.+|
T Consensus 27 ~~~~~pgv~e~L~~L~~~g~~l~IvSN~~g~~~~~~~~~~~~~~~~~~~~~l~~~---------gl~--fd~ii~~~~~~ 95 (161)
T TIGR01261 27 KLRFEKGVIPALLKLKKAGYKFVMVTNQDGLGTPSFPQADFDGPHNLMLQIFRSQ---------GII--FDDVLICPHFP 95 (161)
T ss_pred HeeECCCHHHHHHHHHHCCCeEEEEeCCccccCCcCCHHHHHHHHHHHHHHHHHC---------CCc--eeEEEECCCCC
Confidence 46677999999999999999999999973 55666666653 554 87665542222
Q ss_pred CCCCCCCCccccccCcCccccccccccCCCeeeccCCHHHHHHHhCCCCCcEEEEcccccccccccccCCcEEEEEec-c
Q 011157 281 DFYTSDHPFRCYDTEKDTLAFTKVDAFIPNKIYYHGCLKSFLQITKWNGPEVIYFGDHLFSDLRGPSKAGWRTAAIIH-E 359 (492)
Q Consensus 281 ~FF~~~~pfr~vd~~~gk~~~~~~~~l~~~~vY~~G~~~~~~~~lg~~~~~vLyvGDhi~gDI~~ak~~GwrT~~Vvp-E 359 (492)
. + +....||+ +++|.. +++.+|+++++|+||||. ..|+.+|+++||.+++|.+ |
T Consensus 96 ~---~-------~~~~~KP~---------~~~~~~-----~~~~~~~~~~e~l~IGD~-~~Di~~A~~aGi~~i~~~~~~ 150 (161)
T TIGR01261 96 D---D-------NCDCRKPK---------IKLLEP-----YLKKNLIDKARSYVIGDR-ETDMQLAENLGIRGIQYDEEE 150 (161)
T ss_pred C---C-------CCCCCCCC---------HHHHHH-----HHHHcCCCHHHeEEEeCC-HHHHHHHHHCCCeEEEEChhh
Confidence 0 0 11122343 445544 999999999999999999 5689999999999999964 4
Q ss_pred ch
Q 011157 360 LE 361 (492)
Q Consensus 360 l~ 361 (492)
|.
T Consensus 151 ~~ 152 (161)
T TIGR01261 151 LN 152 (161)
T ss_pred cC
Confidence 43
No 55
>TIGR01549 HAD-SF-IA-v1 haloacid dehalogenase superfamily, subfamily IA, variant 1 with third motif having Dx(3-4)D or Dx(3-4)E. HAD subfamilies caused by an overly broad single model.
Probab=98.93 E-value=1.2e-09 Score=99.11 Aligned_cols=89 Identities=22% Similarity=0.329 Sum_probs=74.5
Q ss_pred chhHHHHHHHHHHcCCeEEEEeCCChHHHHHhhhhhhccCCCCCCCcCCCccEEEEcCCCCCCCCCCCCccccccCcCcc
Q 011157 220 NGQVLQFVKMLREKGKKLFLLTNSPYYFVDGGMRFMLEDSTGYTDSWRELFDVVIAQANKPDFYTSDHPFRCYDTEKDTL 299 (492)
Q Consensus 220 ~p~l~~~L~~Lk~~GkklfL~TNS~~~y~~~vm~~l~~~~~~~g~~w~~yFD~iI~~a~KP~FF~~~~pfr~vd~~~gk~ 299 (492)
.|++.++|+.|++.|++++++||++...+...++.+ +.++|+.|++.. |+. +||
T Consensus 66 ~~g~~e~l~~L~~~g~~~~i~T~~~~~~~~~~~~~~----------l~~~f~~i~~~~---------------~~~-~Kp 119 (154)
T TIGR01549 66 IRGAADLLKRLKEAGIKLGIISNGSLRAQKLLLRKH----------LGDYFDLILGSD---------------EFG-AKP 119 (154)
T ss_pred ccCHHHHHHHHHHCcCeEEEEeCCchHHHHHHHHHH----------HHhcCcEEEecC---------------CCC-CCc
Confidence 478999999999999999999999999999988872 556899888766 333 455
Q ss_pred ccccccccCCCeeeccCCHHHHHHHhCCCCCcEEEEcccccccccccccCC
Q 011157 300 AFTKVDAFIPNKIYYHGCLKSFLQITKWNGPEVIYFGDHLFSDLRGPSKAG 350 (492)
Q Consensus 300 ~~~~~~~l~~~~vY~~G~~~~~~~~lg~~~~~vLyvGDhi~gDI~~ak~~G 350 (492)
. |++|.. +++.+|+++ +|+||||+ ..|+.+|+++|
T Consensus 120 ~---------~~~~~~-----~~~~~~~~~-~~l~iGDs-~~Di~aa~~aG 154 (154)
T TIGR01549 120 E---------PEIFLA-----ALESLGLPP-EVLHVGDN-LNDIEGARNAG 154 (154)
T ss_pred C---------HHHHHH-----HHHHcCCCC-CEEEEeCC-HHHHHHHHHcc
Confidence 5 666666 999999998 99999999 67798888776
No 56
>PRK08942 D,D-heptose 1,7-bisphosphate phosphatase; Validated
Probab=98.92 E-value=2.2e-09 Score=100.98 Aligned_cols=107 Identities=13% Similarity=0.108 Sum_probs=76.9
Q ss_pred hccchhHHHHHHHHHHcCCeEEEEeCCCh---------------HHHHHhhhhhhccCCCCCCCcCCCccEEEEcCCCCC
Q 011157 217 LVKNGQVLQFVKMLREKGKKLFLLTNSPY---------------YFVDGGMRFMLEDSTGYTDSWRELFDVVIAQANKPD 281 (492)
Q Consensus 217 i~k~p~l~~~L~~Lk~~GkklfL~TNS~~---------------~y~~~vm~~l~~~~~~~g~~w~~yFD~iI~~a~KP~ 281 (492)
+..-|++.++|++|++.|++++++||++. +++..+++. .++ +||.+++...-+.
T Consensus 28 ~~~~pgv~e~L~~Lk~~g~~l~I~Tn~~~~~~~~~~~~~~~~~~~~~~~~l~~---------~g~--~f~~i~~~~~~~~ 96 (181)
T PRK08942 28 WIPIPGSIEAIARLKQAGYRVVVATNQSGIARGLFTEAQLNALHEKMDWSLAD---------RGG--RLDGIYYCPHHPE 96 (181)
T ss_pred eEECCCHHHHHHHHHHCCCEEEEEeCCccccCCcCCHHHHHHHHHHHHHHHHH---------cCC--ccceEEECCCCCC
Confidence 34568999999999999999999999973 222333332 133 4777765431000
Q ss_pred CCCCCCCccccccCcCccccccccccCCCeeeccCCHHHHHHHhCCCCCcEEEEcccccccccccccCCcEEEEEecc
Q 011157 282 FYTSDHPFRCYDTEKDTLAFTKVDAFIPNKIYYHGCLKSFLQITKWNGPEVIYFGDHLFSDLRGPSKAGWRTAAIIHE 359 (492)
Q Consensus 282 FF~~~~pfr~vd~~~gk~~~~~~~~l~~~~vY~~G~~~~~~~~lg~~~~~vLyvGDhi~gDI~~ak~~GwrT~~VvpE 359 (492)
-+...+||. |.+|.. +++.+|+.+++|++|||+.. ||.+|+++||++++|...
T Consensus 97 ----------~~~~~~KP~---------p~~~~~-----~~~~l~~~~~~~~~VgDs~~-Di~~A~~aG~~~i~v~~g 149 (181)
T PRK08942 97 ----------DGCDCRKPK---------PGMLLS-----IAERLNIDLAGSPMVGDSLR-DLQAAAAAGVTPVLVRTG 149 (181)
T ss_pred ----------CCCcCCCCC---------HHHHHH-----HHHHcCCChhhEEEEeCCHH-HHHHHHHCCCeEEEEcCC
Confidence 012234555 667776 99999999999999999975 899999999999998543
No 57
>TIGR01548 HAD-SF-IA-hyp1 haloacid dehalogenase superfamily, subfamily IA hydrolase, TIGR01548. All but the Halobacterium sequence currently found are annotated as "Imidazoleglycerol-phosphate dehydratase", however, the source of the annotation could not be traced and significant homology could not be found between any of these sequences and known IGPD's.
Probab=98.87 E-value=2.5e-09 Score=101.59 Aligned_cols=88 Identities=15% Similarity=0.030 Sum_probs=73.8
Q ss_pred hhHHHHHHHHHHcCCeEEEEeCCChHHHHHhhhhhhccCCCCCCCcCCCccEEEEcCCCCCCCCCCCCccccccCcCccc
Q 011157 221 GQVLQFVKMLREKGKKLFLLTNSPYYFVDGGMRFMLEDSTGYTDSWRELFDVVIAQANKPDFYTSDHPFRCYDTEKDTLA 300 (492)
Q Consensus 221 p~l~~~L~~Lk~~GkklfL~TNS~~~y~~~vm~~l~~~~~~~g~~w~~yFD~iI~~a~KP~FF~~~~pfr~vd~~~gk~~ 300 (492)
+...++|+.|++.|.+++|+||++...+..+++.+ +|..|||.+++.. ++.. ||+
T Consensus 109 ~~~~~~L~~l~~~g~~~~i~T~~~~~~~~~~l~~~---------gl~~~f~~~~~~~---------------~~~~-KP~ 163 (197)
T TIGR01548 109 LTPKGLLRELHRAPKGMAVVTGRPRKDAAKFLTTH---------GLEILFPVQIWME---------------DCPP-KPN 163 (197)
T ss_pred cCHHHHHHHHHHcCCcEEEECCCCHHHHHHHHHHc---------CchhhCCEEEeec---------------CCCC-CcC
Confidence 34589999999999999999999999999999974 8899999998877 3322 454
Q ss_pred cccccccCCCeeeccCCHHHHHHHhCCCCCcEEEEccccccccccccc
Q 011157 301 FTKVDAFIPNKIYYHGCLKSFLQITKWNGPEVIYFGDHLFSDLRGPSK 348 (492)
Q Consensus 301 ~~~~~~l~~~~vY~~G~~~~~~~~lg~~~~~vLyvGDhi~gDI~~ak~ 348 (492)
|++|.. +++.+|+++++|+||||++. ||.+|++
T Consensus 164 ---------p~~~~~-----~~~~~~~~~~~~i~vGD~~~-Di~aA~~ 196 (197)
T TIGR01548 164 ---------PEPLIL-----AAKALGVEACHAAMVGDTVD-DIITGRK 196 (197)
T ss_pred ---------HHHHHH-----HHHHhCcCcccEEEEeCCHH-HHHHHHh
Confidence 666665 99999999999999999985 6987765
No 58
>TIGR00213 GmhB_yaeD D,D-heptose 1,7-bisphosphate phosphatase. This family of proteins formerly designated yaeD resembles the histidinol phosphatase domain of the bifunctional protein HisB. The member from E. coli has been characterized as D,D-heptose 1,7-bisphosphate phosphatase, GmhB, involved in inner core LPS assembly (PubMed:11751812).
Probab=98.87 E-value=4.2e-09 Score=98.84 Aligned_cols=112 Identities=16% Similarity=0.139 Sum_probs=74.1
Q ss_pred hccchhHHHHHHHHHHcCCeEEEEeCCCh----HHH-----------HHhhhhhhccCCCCCCCcCCCccEEEEcCCCCC
Q 011157 217 LVKNGQVLQFVKMLREKGKKLFLLTNSPY----YFV-----------DGGMRFMLEDSTGYTDSWRELFDVVIAQANKPD 281 (492)
Q Consensus 217 i~k~p~l~~~L~~Lk~~GkklfL~TNS~~----~y~-----------~~vm~~l~~~~~~~g~~w~~yFD~iI~~a~KP~ 281 (492)
+..-|++.++|++|+++|++++++||++. .++ ..++..+ +.. ||.++....-|.
T Consensus 25 ~~~~pgv~e~L~~Lk~~G~~l~i~TN~~~~~~~~~~~~~~~~~~~~~~~~l~~~---------~~~--~~~i~~~~~~~~ 93 (176)
T TIGR00213 25 FEFIDGVIDALRELKKMGYALVLVTNQSGIARGYFTEAQFEQLTEWMDWSLAER---------DVD--LDGIYYCPHHPE 93 (176)
T ss_pred eEECCCHHHHHHHHHHCCCEEEEEeCCccccCCcCCHHHHHHHHHHHHHHHHHc---------CCC--ccEEEECCCCCc
Confidence 34568999999999999999999999984 122 2222211 111 777665432110
Q ss_pred CCCCCCCccccccCcCccccccccccCCCeeeccCCHHHHHHHhCCCCCcEEEEcccccccccccccCCcEE-EEEec
Q 011157 282 FYTSDHPFRCYDTEKDTLAFTKVDAFIPNKIYYHGCLKSFLQITKWNGPEVIYFGDHLFSDLRGPSKAGWRT-AAIIH 358 (492)
Q Consensus 282 FF~~~~pfr~vd~~~gk~~~~~~~~l~~~~vY~~G~~~~~~~~lg~~~~~vLyvGDhi~gDI~~ak~~GwrT-~~Vvp 358 (492)
+.+-..=+...+||+ |++|.. +++.+|+++++|+||||+. .||.+|+++||+| ++|-.
T Consensus 94 ----~~~~~~~~~~~~KP~---------p~~~~~-----a~~~~~~~~~~~v~VGDs~-~Di~aA~~aG~~~~i~v~~ 152 (176)
T TIGR00213 94 ----GVEEFRQVCDCRKPK---------PGMLLQ-----ARKELHIDMAQSYMVGDKL-EDMQAGVAAKVKTNVLVRT 152 (176)
T ss_pred ----ccccccCCCCCCCCC---------HHHHHH-----HHHHcCcChhhEEEEcCCH-HHHHHHHHCCCcEEEEEec
Confidence 000000012234554 666666 9999999999999999997 4799999999999 56543
No 59
>KOG2914 consensus Predicted haloacid-halidohydrolase and related hydrolases [General function prediction only]
Probab=98.82 E-value=1.2e-08 Score=99.94 Aligned_cols=103 Identities=15% Similarity=0.170 Sum_probs=91.7
Q ss_pred chhHHHHHHHHHHcCCeEEEEeCCChHHHHHhhhhhhccCCCCCCCcCCCccEEEEcCCCCCCCCCCCCccccccCcCcc
Q 011157 220 NGQVLQFVKMLREKGKKLFLLTNSPYYFVDGGMRFMLEDSTGYTDSWRELFDVVIAQANKPDFYTSDHPFRCYDTEKDTL 299 (492)
Q Consensus 220 ~p~l~~~L~~Lk~~GkklfL~TNS~~~y~~~vm~~l~~~~~~~g~~w~~yFD~iI~~a~KP~FF~~~~pfr~vd~~~gk~ 299 (492)
-||+..+++.|+..|.+++|+|||+....+.-.++. .++.+.|+.+|.++ =| ++..|||
T Consensus 94 ~PGa~kLv~~L~~~gip~alat~s~~~~~~~k~~~~--------~~~~~~f~~~v~~d-~~------------~v~~gKP 152 (222)
T KOG2914|consen 94 MPGAEKLVNHLKNNGIPVALATSSTSASFELKISRH--------EDIFKNFSHVVLGD-DP------------EVKNGKP 152 (222)
T ss_pred CCcHHHHHHHHHhCCCCeeEEecCCcccHHHHHHHh--------hHHHHhcCCCeecC-Cc------------cccCCCC
Confidence 359999999999999999999999999888888873 67999999988833 22 6788888
Q ss_pred ccccccccCCCeeeccCCHHHHHHHhCCCC-CcEEEEcccccccccccccCCcEEEEEec
Q 011157 300 AFTKVDAFIPNKIYYHGCLKSFLQITKWNG-PEVIYFGDHLFSDLRGPSKAGWRTAAIIH 358 (492)
Q Consensus 300 ~~~~~~~l~~~~vY~~G~~~~~~~~lg~~~-~~vLyvGDhi~gDI~~ak~~GwrT~~Vvp 358 (492)
+ |++|.- +++.+|..+ +.||+|+|.+-| |.+++.+||.+++|..
T Consensus 153 ~---------Pdi~l~-----A~~~l~~~~~~k~lVfeds~~G-v~aa~aagm~vi~v~~ 197 (222)
T KOG2914|consen 153 D---------PDIYLK-----AAKRLGVPPPSKCLVFEDSPVG-VQAAKAAGMQVVGVAT 197 (222)
T ss_pred C---------chHHHH-----HHHhcCCCCccceEEECCCHHH-HHHHHhcCCeEEEecC
Confidence 8 999999 999999999 999999999999 9899999999999954
No 60
>TIGR01664 DNA-3'-Pase DNA 3'-phosphatase. The central phosphatase domain is a member of the IIIA subfamily (TIGR01662) of the haloacid dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. As is common in this superfamily, the enzyme is magnesium dependent. A difference between this enzyme and other HAD-superfamily phosphatases is in the third conserved catalytic motif which usually contains two conserved aspartate residues believed to be involved in binding the magnesium ion. Here, the second aspartate is usually replaced by an arginine residue which may indicate an interaction with the phosphate backbone of the substrate. Alternatively, there is an additional conserved aspartate downstream of the ususal site which may indicate slightly different fold in this region.
Probab=98.79 E-value=7.2e-09 Score=97.08 Aligned_cols=103 Identities=12% Similarity=0.134 Sum_probs=75.7
Q ss_pred CccchhccchhHHHHHHHHHHcCCeEEEEeCCChH------------HHHHhhhhhhccCCCCCCCcCCCccEEEEcCCC
Q 011157 212 DPNRYLVKNGQVLQFVKMLREKGKKLFLLTNSPYY------------FVDGGMRFMLEDSTGYTDSWRELFDVVIAQANK 279 (492)
Q Consensus 212 np~kYi~k~p~l~~~L~~Lk~~GkklfL~TNS~~~------------y~~~vm~~l~~~~~~~g~~w~~yFD~iI~~a~K 279 (492)
+|++....-|++.++|++|+++|++++++||.+.. .++.+++.+ ++. ++.+++...
T Consensus 36 ~~~~~~~~~pgv~e~L~~Lk~~G~~l~I~TN~~~~~~~~~~~~~~~~~i~~~l~~~---------gl~--~~~ii~~~~- 103 (166)
T TIGR01664 36 SASDWRFLYPEIPAKLQELDDEGYKIVIFTNQSGIGRGKLSAESFKNKIEAFLEKL---------KVP--IQVLAATHA- 103 (166)
T ss_pred ChHHeEEecCCHHHHHHHHHHCCCEEEEEeCCcccccCcccHHHHHHHHHHHHHHc---------CCC--EEEEEecCC-
Confidence 55565556689999999999999999999998763 466666664 442 355555441
Q ss_pred CCCCCCCCCccccccCcCccccccccccCCCeeeccCCHHHHHHHhC--CCCCcEEEEcccc-------cccccccccCC
Q 011157 280 PDFYTSDHPFRCYDTEKDTLAFTKVDAFIPNKIYYHGCLKSFLQITK--WNGPEVIYFGDHL-------FSDLRGPSKAG 350 (492)
Q Consensus 280 P~FF~~~~pfr~vd~~~gk~~~~~~~~l~~~~vY~~G~~~~~~~~lg--~~~~~vLyvGDhi-------~gDI~~ak~~G 350 (492)
....||. +++| ..+++.+| +++++++||||.. -.|+.+|+++|
T Consensus 104 --------------~~~~KP~---------p~~~-----~~~~~~~~~~~~~~~~v~VGD~~~~~~~~~~~Di~aA~~aG 155 (166)
T TIGR01664 104 --------------GLYRKPM---------TGMW-----EYLQSQYNSPIKMTRSFYVGDAAGRKLDFSDADIKFAKNLG 155 (166)
T ss_pred --------------CCCCCCc---------cHHH-----HHHHHHcCCCCCchhcEEEECCCCCCCCCchhHHHHHHHCC
Confidence 1122443 4444 44999999 9999999999997 37999999999
Q ss_pred cEEE
Q 011157 351 WRTA 354 (492)
Q Consensus 351 wrT~ 354 (492)
++++
T Consensus 156 i~~~ 159 (166)
T TIGR01664 156 LEFK 159 (166)
T ss_pred CCcC
Confidence 9885
No 61
>cd01427 HAD_like Haloacid dehalogenase-like hydrolases. The haloacid dehalogenase-like (HAD) superfamily includes L-2-haloacid dehalogenase, epoxide hydrolase, phosphoserine phosphatase, phosphomannomutase, phosphoglycolate phosphatase, P-type ATPase, and many others, all of which use a nucleophilic aspartate in their phosphoryl transfer reaction. All members possess a highly conserved alpha/beta core domain, and many also possess a small cap domain, the fold and function of which is variable. Members of this superfamily are sometimes referred to as belonging to the DDDD superfamily of phosphohydrolases.
Probab=98.78 E-value=8.5e-09 Score=88.88 Aligned_cols=116 Identities=25% Similarity=0.224 Sum_probs=84.3
Q ss_pred hccchhHHHHHHHHHHcCCeEEEEeCCChHHHHHhhhhhhccCCCCCCCcCCCccEEEEcCCCCCCCCCCC-CccccccC
Q 011157 217 LVKNGQVLQFVKMLREKGKKLFLLTNSPYYFVDGGMRFMLEDSTGYTDSWRELFDVVIAQANKPDFYTSDH-PFRCYDTE 295 (492)
Q Consensus 217 i~k~p~l~~~L~~Lk~~GkklfL~TNS~~~y~~~vm~~l~~~~~~~g~~w~~yFD~iI~~a~KP~FF~~~~-pfr~vd~~ 295 (492)
+...|++.++|++|+++|.+++++||+....+...++.+ ++..+|+.+++....+.+-.... +.-...+.
T Consensus 23 ~~~~~~~~~~l~~l~~~g~~i~ivS~~~~~~~~~~~~~~---------~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~ 93 (139)
T cd01427 23 LELYPGVKEALKELKEKGIKLALATNKSRREVLELLEEL---------GLDDYFDPVITSNGAAIYYPKEGLFLGGGPFD 93 (139)
T ss_pred CCcCcCHHHHHHHHHHCCCeEEEEeCchHHHHHHHHHHc---------CCchhhhheeccchhhhhcccccccccccccc
Confidence 455789999999999999999999999999999999873 67788998887774433221111 01000111
Q ss_pred cCccccccccccCCCeeeccCCHHHHHHHhCCCCCcEEEEcccccccccccccCCcEEEEE
Q 011157 296 KDTLAFTKVDAFIPNKIYYHGCLKSFLQITKWNGPEVIYFGDHLFSDLRGPSKAGWRTAAI 356 (492)
Q Consensus 296 ~gk~~~~~~~~l~~~~vY~~G~~~~~~~~lg~~~~~vLyvGDhi~gDI~~ak~~GwrT~~V 356 (492)
.+++. +.. +..+++.++..+++|++|||+. +|+..++++||++++|
T Consensus 94 ~~~~~---------~~~-----~~~~~~~~~~~~~~~~~igD~~-~d~~~~~~~g~~~i~v 139 (139)
T cd01427 94 IGKPN---------PDK-----LLAALKLLGVDPEEVLMVGDSL-NDIEMAKAAGGLGVAV 139 (139)
T ss_pred cCCCC---------HHH-----HHHHHHHcCCChhhEEEeCCCH-HHHHHHHHcCCceeeC
Confidence 11111 222 3458888898899999999999 8898888899999875
No 62
>smart00577 CPDc catalytic domain of ctd-like phosphatases.
Probab=98.74 E-value=3.4e-08 Score=90.53 Aligned_cols=97 Identities=15% Similarity=0.044 Sum_probs=76.1
Q ss_pred cchhccchhHHHHHHHHHHcCCeEEEEeCCChHHHHHhhhhhhccCCCCCCCcCCCccEEEEcCCCCCCCCCCCCccccc
Q 011157 214 NRYLVKNGQVLQFVKMLREKGKKLFLLTNSPYYFVDGGMRFMLEDSTGYTDSWRELFDVVIAQANKPDFYTSDHPFRCYD 293 (492)
Q Consensus 214 ~kYi~k~p~l~~~L~~Lk~~GkklfL~TNS~~~y~~~vm~~l~~~~~~~g~~w~~yFD~iI~~a~KP~FF~~~~pfr~vd 293 (492)
..++..-|++.++|+.|+ .|.+++|+||++.++++.+++.+ +..+ .+||.|++.. |
T Consensus 41 ~~~v~l~pG~~e~L~~L~-~~~~l~I~Ts~~~~~~~~il~~l-------~~~~-~~f~~i~~~~---------------d 96 (148)
T smart00577 41 GVYVKKRPGVDEFLKRAS-ELFELVVFTAGLRMYADPVLDLL-------DPKK-YFGYRRLFRD---------------E 96 (148)
T ss_pred EEEEEECCCHHHHHHHHH-hccEEEEEeCCcHHHHHHHHHHh-------CcCC-CEeeeEEECc---------------c
Confidence 345566899999999998 57999999999999999999985 2322 4669999887 4
Q ss_pred cCcCccccccccccCCCeeeccCCHHHHHHHhCCCCCcEEEEcccccccccccccCCcE
Q 011157 294 TEKDTLAFTKVDAFIPNKIYYHGCLKSFLQITKWNGPEVIYFGDHLFSDLRGPSKAGWR 352 (492)
Q Consensus 294 ~~~gk~~~~~~~~l~~~~vY~~G~~~~~~~~lg~~~~~vLyvGDhi~gDI~~ak~~Gwr 352 (492)
+..+| |. |.. +++.+|+++++|+||||+..+ +.+++.+|..
T Consensus 97 ~~~~K-----------P~-~~k-----~l~~l~~~p~~~i~i~Ds~~~-~~aa~~ngI~ 137 (148)
T smart00577 97 CVFVK-----------GK-YVK-----DLSLLGRDLSNVIIIDDSPDS-WPFHPENLIP 137 (148)
T ss_pred ccccC-----------Ce-Eee-----cHHHcCCChhcEEEEECCHHH-hhcCccCEEE
Confidence 43333 22 545 788999999999999999876 8777777654
No 63
>PF09419 PGP_phosphatase: Mitochondrial PGP phosphatase; InterPro: IPR010021 This group of hypothetical proteins is a part of the IIIA subfamily of the haloacid dehalogenase (HAD) superfamily of hydrolases. All characterised members of this subfamily and most characterised members of the HAD superfamily are phosphatases. HAD superfamily phosphatases contain active site residues in several conserved catalytic motifs [], all of which are found conserved here. This family consists of sequences from fungi, plants, cyanobacteria, Gram-positive bacteria and Deinococcus. There is presently no characterisation of any sequence in this family.
Probab=98.66 E-value=1e-07 Score=89.69 Aligned_cols=92 Identities=21% Similarity=0.326 Sum_probs=71.3
Q ss_pred cchhHHHHHHHHHHcCC--eEEEEeCC-------ChHHHHHhhhhhhccCCCCCCCcCCCccEEEEcCCCCCCCCCCCCc
Q 011157 219 KNGQVLQFVKMLREKGK--KLFLLTNS-------PYYFVDGGMRFMLEDSTGYTDSWRELFDVVIAQANKPDFYTSDHPF 289 (492)
Q Consensus 219 k~p~l~~~L~~Lk~~Gk--klfL~TNS-------~~~y~~~vm~~l~~~~~~~g~~w~~yFD~iI~~a~KP~FF~~~~pf 289 (492)
-.|.+..|++++|+.+. +++++||| ....++.+-+.+ |. .++...++||
T Consensus 60 i~~~~~~~~~~l~~~~~~~~v~IvSNsaGs~~d~~~~~a~~~~~~l-------gI------pvl~h~~kKP--------- 117 (168)
T PF09419_consen 60 IPPEYAEWLNELKKQFGKDRVLIVSNSAGSSDDPDGERAEALEKAL-------GI------PVLRHRAKKP--------- 117 (168)
T ss_pred CCHHHHHHHHHHHHHCCCCeEEEEECCCCcccCccHHHHHHHHHhh-------CC------cEEEeCCCCC---------
Confidence 35789999999999875 59999999 466777666554 32 3566788888
Q ss_pred cccccCcCccccccccccCCCeeeccCCHHHHHHHhCC-----CCCcEEEEcccccccccccccCCcEEEEEec
Q 011157 290 RCYDTEKDTLAFTKVDAFIPNKIYYHGCLKSFLQITKW-----NGPEVIYFGDHLFSDLRGPSKAGWRTAAIIH 358 (492)
Q Consensus 290 r~vd~~~gk~~~~~~~~l~~~~vY~~G~~~~~~~~lg~-----~~~~vLyvGDhi~gDI~~ak~~GwrT~~Vvp 358 (492)
|+..++++.++. +++|+++|||++++||+.+++.|..|++|..
T Consensus 118 --------------------------~~~~~i~~~~~~~~~~~~p~eiavIGDrl~TDVl~gN~~G~~tilv~~ 165 (168)
T PF09419_consen 118 --------------------------GCFREILKYFKCQKVVTSPSEIAVIGDRLFTDVLMGNRMGSYTILVTD 165 (168)
T ss_pred --------------------------ccHHHHHHHHhhccCCCCchhEEEEcchHHHHHHHhhccCceEEEEec
Confidence 333445555543 4899999999999999999999999999854
No 64
>TIGR01493 HAD-SF-IA-v2 Haloacid dehalogenase superfamily, subfamily IA, variant 2 with 3rd motif like haloacid dehalogenase. The Subfamily IA and IB capping domains are predicted by PSI-PRED to consist of an alpha helical bundle. Subfamily I encompasses such a wide region of sequence space (the sequences are highly divergent) that modelling it with a single alignment is impossible, resulting in an overly broad description which allows in many unrelated sequences. Subfamily IA and IB are separated based on an aparrent phylogenetic bifurcation. Subfamily IA is still too broad to model, but cannot be further subdivided into large chunks based on phylogenetic trees. Of the three motifs defining the HAD superfamily, the third has three variant forms : (1) hhhhsDxxx(x)D, (2) hhhhssxxx(x)D and (3) hhhhDDxxx(x)s where _s_ refers to a small amino acid and _h_ to a hydrophobic one. All three of these variants are found in subfamily IA. Individual models were made based on seeds exhibiting only o
Probab=98.65 E-value=6.5e-09 Score=96.32 Aligned_cols=85 Identities=14% Similarity=0.104 Sum_probs=71.7
Q ss_pred ccchhHHHHHHHHHHcCCeEEEEeCCChHHHHHhhhhhhccCCCCCCCcCCCccEEEEcCCCCCCCCCCCCccccccCcC
Q 011157 218 VKNGQVLQFVKMLREKGKKLFLLTNSPYYFVDGGMRFMLEDSTGYTDSWRELFDVVIAQANKPDFYTSDHPFRCYDTEKD 297 (492)
Q Consensus 218 ~k~p~l~~~L~~Lk~~GkklfL~TNS~~~y~~~vm~~l~~~~~~~g~~w~~yFD~iI~~a~KP~FF~~~~pfr~vd~~~g 297 (492)
.+.|++.++|+ +++++||++..++...++.+ ++.+|||.|++.. ++..+
T Consensus 90 ~~~~g~~~~L~-------~~~i~Tn~~~~~~~~~l~~~---------~l~~~fd~v~~~~---------------~~~~~ 138 (175)
T TIGR01493 90 PPWPDSAAALA-------RVAILSNASHWAFDQFAQQA---------GLPWYFDRAFSVD---------------TVRAY 138 (175)
T ss_pred CCCCchHHHHH-------HHhhhhCCCHHHHHHHHHHC---------CCHHHHhhhccHh---------------hcCCC
Confidence 35688998888 38899999999999999874 7899999988776 44556
Q ss_pred ccccccccccCCCeeeccCCHHHHHHHhCCCCCcEEEEccccccccccccc
Q 011157 298 TLAFTKVDAFIPNKIYYHGCLKSFLQITKWNGPEVIYFGDHLFSDLRGPSK 348 (492)
Q Consensus 298 k~~~~~~~~l~~~~vY~~G~~~~~~~~lg~~~~~vLyvGDhi~gDI~~ak~ 348 (492)
||+ |++|.. +++.+|+++++|++|||+. .||.+|++
T Consensus 139 KP~---------p~~f~~-----~~~~~~~~p~~~l~vgD~~-~Di~~A~~ 174 (175)
T TIGR01493 139 KPD---------PVVYEL-----VFDTVGLPPDRVLMVAAHQ-WDLIGARK 174 (175)
T ss_pred CCC---------HHHHHH-----HHHHHCCCHHHeEeEecCh-hhHHHHhc
Confidence 776 888888 9999999999999999995 68988765
No 65
>TIGR01681 HAD-SF-IIIC HAD-superfamily phosphatase, subfamily IIIC. No member of this subfamily is characterized with respect to function, however the MDP-1 protein is a characterized phosphatase. All of the characterized enzymes within subfamily III are phosphatases, and all of the active site residues characteristic of HAD-superfamily phosphatases are present in subfamily IIIC.
Probab=98.64 E-value=2.7e-08 Score=89.07 Aligned_cols=86 Identities=12% Similarity=0.091 Sum_probs=69.0
Q ss_pred cchhHHHHHHHHHHcCCeEEEEeCC-ChHHHHHhhhhhhccCCCCC--CCcCCCccEEEEcCCCCCCCCCCCCccccccC
Q 011157 219 KNGQVLQFVKMLREKGKKLFLLTNS-PYYFVDGGMRFMLEDSTGYT--DSWRELFDVVIAQANKPDFYTSDHPFRCYDTE 295 (492)
Q Consensus 219 k~p~l~~~L~~Lk~~GkklfL~TNS-~~~y~~~vm~~l~~~~~~~g--~~w~~yFD~iI~~a~KP~FF~~~~pfr~vd~~ 295 (492)
.-|++.++|+.||++|++++++||+ ...++..+++..- . .+ ..+.++||.++++..||
T Consensus 30 ~~~gv~e~L~~Lk~~g~~l~i~Sn~~~~~~~~~~l~~~~-~---~~~i~~l~~~f~~~~~~~~~p--------------- 90 (128)
T TIGR01681 30 TIKEIRDKLQTLKKNGFLLALASYNDDPHVAYELLKIFE-D---FGIIFPLAEYFDPLTIGYWLP--------------- 90 (128)
T ss_pred HHHHHHHHHHHHHHCCeEEEEEeCCCCHHHHHHHHHhcc-c---cccchhhHhhhhhhhhcCCCc---------------
Confidence 4579999999999999999999999 8999999888630 0 00 11789999988886544
Q ss_pred cCccccccccccCCCeeeccCCHHHHHHHhC--CCCCcEEEEcccccc
Q 011157 296 KDTLAFTKVDAFIPNKIYYHGCLKSFLQITK--WNGPEVIYFGDHLFS 341 (492)
Q Consensus 296 ~gk~~~~~~~~l~~~~vY~~G~~~~~~~~lg--~~~~~vLyvGDhi~g 341 (492)
+ |++|.. +++.+| +.+++|+||||+...
T Consensus 91 ----k---------p~~~~~-----a~~~lg~~~~p~~~l~igDs~~n 120 (128)
T TIGR01681 91 ----K---------SPRLVE-----IALKLNGVLKPKSILFVDDRPDN 120 (128)
T ss_pred ----H---------HHHHHH-----HHHHhcCCCCcceEEEECCCHhH
Confidence 1 444544 999999 999999999999877
No 66
>TIGR01458 HAD-SF-IIA-hyp3 HAD-superfamily subfamily IIA hydrolase, TIGR01458. This hypothetical equivalog is a member of the IIA subfamily (TIGR01460) of the haloacid dehalogenase superfamily of aspartate-nucleophile hydrolases. One sequence (GP|10716807) has been annotated as a "phospholysine phosphohistidine inorganic pyrophosphatase," probably in reference to studies on similarly described (but unsequenced) enzymes from bovine and rat tissues. However, the supporting information for this annotation has never been published.
Probab=98.56 E-value=1.2e-08 Score=101.92 Aligned_cols=103 Identities=15% Similarity=0.176 Sum_probs=82.1
Q ss_pred hhHHHHHHHHHHcCCeEEEEeCCChHHHHHhhhhhhccCCCCCCCcCCCccEEEEcC-CCCCCCCCCCCccccccCcCcc
Q 011157 221 GQVLQFVKMLREKGKKLFLLTNSPYYFVDGGMRFMLEDSTGYTDSWRELFDVVIAQA-NKPDFYTSDHPFRCYDTEKDTL 299 (492)
Q Consensus 221 p~l~~~L~~Lk~~GkklfL~TNS~~~y~~~vm~~l~~~~~~~g~~w~~yFD~iI~~a-~KP~FF~~~~pfr~vd~~~gk~ 299 (492)
+++...++.|++.|++++++||.+..+....+.. .++..+|+.|.... .+|.++ |||
T Consensus 123 ~~l~~a~~~L~~~~~~~~iatn~~~~~~~~~~~~---------~g~g~~~~~i~~~~~~~~~~~-------------gKP 180 (257)
T TIGR01458 123 QILNQAFRLLLDGAKPLLIAIGKGRYYKRKDGLA---------LDVGPFVTALEYATDTKATVV-------------GKP 180 (257)
T ss_pred HHHHHHHHHHHcCCCCEEEEeCCCCCCcCCCCCC---------CCchHHHHHHHHHhCCCceee-------------cCC
Confidence 5788888999999999999999999888665533 36778888776543 233222 455
Q ss_pred ccccccccCCCeeeccCCHHHHHHHhCCCCCcEEEEcccccccccccccCCcEEEEEecc
Q 011157 300 AFTKVDAFIPNKIYYHGCLKSFLQITKWNGPEVIYFGDHLFSDLRGPSKAGWRTAAIIHE 359 (492)
Q Consensus 300 ~~~~~~~l~~~~vY~~G~~~~~~~~lg~~~~~vLyvGDhi~gDI~~ak~~GwrT~~VvpE 359 (492)
. +.+|.. +++.+|.++++|++|||++..||.+|+++||+|++|...
T Consensus 181 ~---------p~~~~~-----~~~~~~~~~~~~~~vGD~~~~Di~~a~~~G~~~i~v~~G 226 (257)
T TIGR01458 181 S---------KTFFLE-----ALRATGCEPEEAVMIGDDCRDDVGGAQDCGMRGIQVRTG 226 (257)
T ss_pred C---------HHHHHH-----HHHHhCCChhhEEEECCCcHHHHHHHHHcCCeEEEECCC
Confidence 4 667766 899999999999999999999999999999999999654
No 67
>TIGR00338 serB phosphoserine phosphatase SerB. Phosphoserine phosphatase catalyzes the reaction 3-phospho-serine + H2O = L-serine + phosphate. It catalyzes the last of three steps in the biosynthesis of serine from D-3-phosphoglycerate. Note that this enzyme acts on free phosphoserine, not on phosphoserine residues of phosphoproteins.
Probab=98.51 E-value=1.3e-07 Score=90.81 Aligned_cols=108 Identities=20% Similarity=0.173 Sum_probs=76.0
Q ss_pred hccchhHHHHHHHHHHcCCeEEEEeCCChHHHHHhhhhhhccCCCCCCCcCCCccEEEEcCCCCCCCCCCCCccccccCc
Q 011157 217 LVKNGQVLQFVKMLREKGKKLFLLTNSPYYFVDGGMRFMLEDSTGYTDSWRELFDVVIAQANKPDFYTSDHPFRCYDTEK 296 (492)
Q Consensus 217 i~k~p~l~~~L~~Lk~~GkklfL~TNS~~~y~~~vm~~l~~~~~~~g~~w~~yFD~iI~~a~KP~FF~~~~pfr~vd~~~ 296 (492)
+...|++.++|+.|+++|.+++++||+...++..+++.+ ++..+|+..+.... ..++
T Consensus 84 ~~~~~g~~~~l~~l~~~g~~~~IvS~~~~~~~~~~l~~~---------~i~~~~~~~~~~~~--~~~~------------ 140 (219)
T TIGR00338 84 LPLTEGAEELVKTLKEKGYKVAVISGGFDLFAEHVKDKL---------GLDAAFANRLEVED--GKLT------------ 140 (219)
T ss_pred CCcCCCHHHHHHHHHHCCCEEEEECCCcHHHHHHHHHHc---------CCCceEeeEEEEEC--CEEE------------
Confidence 346789999999999999999999999999999999874 56677754332220 0000
Q ss_pred CccccccccccCCCeeeccCCHHHHHHHhCCCCCcEEEEcccccccccccccCCcEE
Q 011157 297 DTLAFTKVDAFIPNKIYYHGCLKSFLQITKWNGPEVIYFGDHLFSDLRGPSKAGWRT 353 (492)
Q Consensus 297 gk~~~~~~~~l~~~~vY~~G~~~~~~~~lg~~~~~vLyvGDhi~gDI~~ak~~GwrT 353 (492)
|...........++.+|.. +++.+|+++++|+||||+. +|+.+++++|+.+
T Consensus 141 ~~~~~~~~~~~~k~~~~~~-----~~~~~~~~~~~~i~iGDs~-~Di~aa~~ag~~i 191 (219)
T TIGR00338 141 GLVEGPIVDASYKGKTLLI-----LLRKEGISPENTVAVGDGA-NDLSMIKAAGLGI 191 (219)
T ss_pred EEecCcccCCcccHHHHHH-----HHHHcCCCHHHEEEEECCH-HHHHHHHhCCCeE
Confidence 0000000000112555554 8899999999999999995 8898999999975
No 68
>TIGR01491 HAD-SF-IB-PSPlk HAD-superfamily, subfamily-IB PSPase-like hydrolase, archaeal. This hypothetical equivalog is a member of the IB subfamily (TIGR01488) of the haloacid dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. The sequences modelled by this alignment are all from archaeal species. The phylogenetically closest group of sequences to these are phosphoserine phosphatases (TIGR00338). There are no known archaeal phosphoserine phosphatases, and no archaea fall within TIGR00338. It is likely, then, that This model represents the archaeal branch of the PSPase equivalog.
Probab=98.51 E-value=3.1e-07 Score=86.48 Aligned_cols=110 Identities=13% Similarity=0.043 Sum_probs=75.9
Q ss_pred ccchhHHHHHHHHHHcCCeEEEEeCCChHHHHHhhhhhhccCCCCCCCcCCCccEEEEcCCCCCCCCCCCCccccccCcC
Q 011157 218 VKNGQVLQFVKMLREKGKKLFLLTNSPYYFVDGGMRFMLEDSTGYTDSWRELFDVVIAQANKPDFYTSDHPFRCYDTEKD 297 (492)
Q Consensus 218 ~k~p~l~~~L~~Lk~~GkklfL~TNS~~~y~~~vm~~l~~~~~~~g~~w~~yFD~iI~~a~KP~FF~~~~pfr~vd~~~g 297 (492)
...|++.++|+.|++.|.+++|+||+...+++.+++.+ ++..+|+.++.... -.+++ ..|+..
T Consensus 80 ~~~~g~~e~l~~l~~~g~~~~IvS~~~~~~~~~~l~~~---------g~~~~~~~~~~~~~-~g~~~-p~~~~~------ 142 (201)
T TIGR01491 80 SLRDYAEELVRWLKEKGLKTAIVSGGIMCLAKKVAEKL---------NPDYVYSNELVFDE-KGFIQ-PDGIVR------ 142 (201)
T ss_pred CCCccHHHHHHHHHHCCCEEEEEeCCcHHHHHHHHHHh---------CCCeEEEEEEEEcC-CCeEe-cceeeE------
Confidence 35689999999999999999999999999999999885 45667766554431 00000 000000
Q ss_pred ccccccccccCCCeeeccCCHHHHHHHhCCCCCcEEEEcccccccccccccCCcEEEEE
Q 011157 298 TLAFTKVDAFIPNKIYYHGCLKSFLQITKWNGPEVIYFGDHLFSDLRGPSKAGWRTAAI 356 (492)
Q Consensus 298 k~~~~~~~~l~~~~vY~~G~~~~~~~~lg~~~~~vLyvGDhi~gDI~~ak~~GwrT~~V 356 (492)
.+...++++ +..+++.+|+++++|+||||+. .|+.+++.+|+..++.
T Consensus 143 ------~~~~~k~~~-----~~~~~~~~~~~~~~~i~iGDs~-~D~~~a~~ag~~~a~~ 189 (201)
T TIGR01491 143 ------VTFDNKGEA-----VERLKRELNPSLTETVAVGDSK-NDLPMFEVADISISLG 189 (201)
T ss_pred ------EccccHHHH-----HHHHHHHhCCCHHHEEEEcCCH-hHHHHHHhcCCeEEEC
Confidence 000001122 3447888999999999999996 5798899999966554
No 69
>PHA02530 pseT polynucleotide kinase; Provisional
Probab=98.49 E-value=1.3e-07 Score=95.60 Aligned_cols=108 Identities=11% Similarity=0.130 Sum_probs=83.8
Q ss_pred cchhHHHHHHHHHHcCCeEEEEeCCChHHHHHhhhhhhccCCCCCCCcCC-CccEEEEcCCCCCCCCCCCCccccccCcC
Q 011157 219 KNGQVLQFVKMLREKGKKLFLLTNSPYYFVDGGMRFMLEDSTGYTDSWRE-LFDVVIAQANKPDFYTSDHPFRCYDTEKD 297 (492)
Q Consensus 219 k~p~l~~~L~~Lk~~GkklfL~TNS~~~y~~~vm~~l~~~~~~~g~~w~~-yFD~iI~~a~KP~FF~~~~pfr~vd~~~g 297 (492)
..|++.++|+.|++.|++++++||.+...+..+++++ ++.+ +||.|+....-+.|.. +...+
T Consensus 188 ~~~~~~~~l~~l~~~g~~i~i~T~r~~~~~~~~l~~l---------~~~~~~f~~i~~~~~~~~~~~--------~~~~~ 250 (300)
T PHA02530 188 PNPMVVELVKMYKAAGYEIIVVSGRDGVCEEDTVEWL---------RQTDIWFDDLIGRPPDMHFQR--------EQGDK 250 (300)
T ss_pred CChhHHHHHHHHHhCCCEEEEEeCCChhhHHHHHHHH---------HHcCCchhhhhCCcchhhhcc--------cCCCC
Confidence 3579999999999999999999999999999999986 5565 8998877762222211 11123
Q ss_pred ccccccccccCCCeeeccCCHHHHHHHhCC-CCCcEEEEcccccccccccccCCcEEEEEec
Q 011157 298 TLAFTKVDAFIPNKIYYHGCLKSFLQITKW-NGPEVIYFGDHLFSDLRGPSKAGWRTAAIIH 358 (492)
Q Consensus 298 k~~~~~~~~l~~~~vY~~G~~~~~~~~lg~-~~~~vLyvGDhi~gDI~~ak~~GwrT~~Vvp 358 (492)
|+. |.++.. +++.++. .+++|+||||+.+. |.+++++|+.+++|.+
T Consensus 251 kp~---------p~~~~~-----~l~~~~~~~~~~~~~vgD~~~d-~~~a~~~Gi~~i~v~~ 297 (300)
T PHA02530 251 RPD---------DVVKEE-----IFWEKIAPKYDVLLAVDDRDQV-VDMWRRIGLECWQVAP 297 (300)
T ss_pred CCc---------HHHHHH-----HHHHHhccCceEEEEEcCcHHH-HHHHHHhCCeEEEecC
Confidence 444 555555 7777777 56999999999888 9899999999999953
No 70
>PRK05446 imidazole glycerol-phosphate dehydratase/histidinol phosphatase; Provisional
Probab=98.49 E-value=2.7e-07 Score=96.41 Aligned_cols=106 Identities=17% Similarity=0.187 Sum_probs=76.1
Q ss_pred hccchhHHHHHHHHHHcCCeEEEEeCC---------------ChHHHHHhhhhhhccCCCCCCCcCCCccEEEEcCCCCC
Q 011157 217 LVKNGQVLQFVKMLREKGKKLFLLTNS---------------PYYFVDGGMRFMLEDSTGYTDSWRELFDVVIAQANKPD 281 (492)
Q Consensus 217 i~k~p~l~~~L~~Lk~~GkklfL~TNS---------------~~~y~~~vm~~l~~~~~~~g~~w~~yFD~iI~~a~KP~ 281 (492)
+...|++.++|.+|+++|++++++||. +..++..+++. .++ +||.++.+...|
T Consensus 29 ~~l~pGV~e~L~~Lk~~G~kL~IvTNq~g~G~~~~~~~~l~~~~~~i~~iL~~---------~gl--~fd~i~i~~~~~- 96 (354)
T PRK05446 29 LAFEPGVIPALLKLQKAGYKLVMVTNQDGLGTDSFPQEDFDPPHNLMMQIFES---------QGI--KFDEVLICPHFP- 96 (354)
T ss_pred ceECcCHHHHHHHHHhCCCeEEEEECCccccCccccHHHHhhHHHHHHHHHHH---------cCC--ceeeEEEeCCcC-
Confidence 667899999999999999999999995 23344444444 244 377665543211
Q ss_pred CCCCCCCccccccCcCccccccccccCCCeeeccCCHHHHHHHhCCCCCcEEEEcccccccccccccCCcEEEEEec
Q 011157 282 FYTSDHPFRCYDTEKDTLAFTKVDAFIPNKIYYHGCLKSFLQITKWNGPEVIYFGDHLFSDLRGPSKAGWRTAAIIH 358 (492)
Q Consensus 282 FF~~~~pfr~vd~~~gk~~~~~~~~l~~~~vY~~G~~~~~~~~lg~~~~~vLyvGDhi~gDI~~ak~~GwrT~~Vvp 358 (492)
++ +...+||. ++++.. +++.++..+++++||||.. .|+.+|+.+||+++.|-|
T Consensus 97 --sd-------~~~~rKP~---------p~~l~~-----a~~~l~v~~~~svmIGDs~-sDi~aAk~aGi~~I~v~~ 149 (354)
T PRK05446 97 --ED-------NCSCRKPK---------TGLVEE-----YLAEGAIDLANSYVIGDRE-TDVQLAENMGIKGIRYAR 149 (354)
T ss_pred --cc-------cCCCCCCC---------HHHHHH-----HHHHcCCCcccEEEEcCCH-HHHHHHHHCCCeEEEEEC
Confidence 00 11223444 444444 8888999999999999985 789999999999999965
No 71
>TIGR01672 AphA HAD superfamily (subfamily IIIB) phosphatase, TIGR01672. Supporting evidence for the inclusion in the HAD superfamily, whose phosphatase members are magnesium dependent, is the inhibition by EDTA and calcium ions, and stimulation by magnesium ion.
Probab=98.47 E-value=5.2e-07 Score=89.47 Aligned_cols=101 Identities=16% Similarity=0.235 Sum_probs=73.5
Q ss_pred CccchhccchhHHHHHHHHHHcCCeEEEEeCC----ChHHHHHhhhhhhccCCCCCCCcCCCccEEEEcCCCCCCCCCCC
Q 011157 212 DPNRYLVKNGQVLQFVKMLREKGKKLFLLTNS----PYYFVDGGMRFMLEDSTGYTDSWRELFDVVIAQANKPDFYTSDH 287 (492)
Q Consensus 212 np~kYi~k~p~l~~~L~~Lk~~GkklfL~TNS----~~~y~~~vm~~l~~~~~~~g~~w~~yFD~iI~~a~KP~FF~~~~ 287 (492)
.-+....+-+.+.++|++++++|.+++++||. ....++.+++.+ ++.++|++|+++..
T Consensus 108 ~~~~~s~p~~~a~elL~~l~~~G~~i~iVTnr~~~k~~~~a~~ll~~l---------Gi~~~f~~i~~~d~--------- 169 (237)
T TIGR01672 108 GWDEFSIPKEVARQLIDMHQRRGDAIFFVTGRTPGKTDTVSKTLAKNF---------HIPAMNPVIFAGDK--------- 169 (237)
T ss_pred hcccCCcchhHHHHHHHHHHHCCCEEEEEeCCCCCcCHHHHHHHHHHh---------CCchheeEEECCCC---------
Confidence 33444455566999999999999999999999 667888888764 67789998877652
Q ss_pred CccccccCcCccccccccccCCCeeeccCCHHHHHHHhCCCCCcEEEEcccccccccccccCCcEEEEEec
Q 011157 288 PFRCYDTEKDTLAFTKVDAFIPNKIYYHGCLKSFLQITKWNGPEVIYFGDHLFSDLRGPSKAGWRTAAIIH 358 (492)
Q Consensus 288 pfr~vd~~~gk~~~~~~~~l~~~~vY~~G~~~~~~~~lg~~~~~vLyvGDhi~gDI~~ak~~GwrT~~Vvp 358 (492)
....|+. + ..+++..|+ ++||||+.. ||.+|+++|.++++|..
T Consensus 170 ------~~~~Kp~---------~--------~~~l~~~~i----~i~vGDs~~-DI~aAk~AGi~~I~V~~ 212 (237)
T TIGR01672 170 ------PGQYQYT---------K--------TQWIQDKNI----RIHYGDSDN-DITAAKEAGARGIRILR 212 (237)
T ss_pred ------CCCCCCC---------H--------HHHHHhCCC----eEEEeCCHH-HHHHHHHCCCCEEEEEe
Confidence 1111111 1 114444443 899999995 59899999999999953
No 72
>PRK11133 serB phosphoserine phosphatase; Provisional
Probab=98.44 E-value=1.1e-06 Score=90.94 Aligned_cols=108 Identities=19% Similarity=0.092 Sum_probs=71.0
Q ss_pred hccchhHHHHHHHHHHcCCeEEEEeCCChHHHHHhhhhhhccCCCCCCCcCCCcc--EEEEcCCCCCCCCCCCCcccccc
Q 011157 217 LVKNGQVLQFVKMLREKGKKLFLLTNSPYYFVDGGMRFMLEDSTGYTDSWRELFD--VVIAQANKPDFYTSDHPFRCYDT 294 (492)
Q Consensus 217 i~k~p~l~~~L~~Lk~~GkklfL~TNS~~~y~~~vm~~l~~~~~~~g~~w~~yFD--~iI~~a~KP~FF~~~~pfr~vd~ 294 (492)
+...|++.++|+.||+.|.+++|+||+...+++.+++.+ +....|. +-+.+. -+
T Consensus 180 l~l~pGa~elL~~Lk~~G~~~aIvSgg~~~~~~~l~~~L---------gld~~~an~lei~dg----~l----------- 235 (322)
T PRK11133 180 LPLMPGLTELVLKLQALGWKVAIASGGFTYFADYLRDKL---------RLDAAVANELEIMDG----KL----------- 235 (322)
T ss_pred CCCChhHHHHHHHHHHcCCEEEEEECCcchhHHHHHHHc---------CCCeEEEeEEEEECC----EE-----------
Confidence 446899999999999999999999999999999888764 2211111 000100 00
Q ss_pred CcCccccccccccCCCeeeccCCHHHHHHHhCCCCCcEEEEcccccccccccccCCcEEEE
Q 011157 295 EKDTLAFTKVDAFIPNKIYYHGCLKSFLQITKWNGPEVIYFGDHLFSDLRGPSKAGWRTAA 355 (492)
Q Consensus 295 ~~gk~~~~~~~~l~~~~vY~~G~~~~~~~~lg~~~~~vLyvGDhi~gDI~~ak~~GwrT~~ 355 (492)
+|+.....+..-.|++++ .++++.+|+++++|++|||.. .|+..++.+|+-.+.
T Consensus 236 -tg~v~g~iv~~k~K~~~L-----~~la~~lgi~~~qtIaVGDg~-NDl~m~~~AGlgiA~ 289 (322)
T PRK11133 236 -TGNVLGDIVDAQYKADTL-----TRLAQEYEIPLAQTVAIGDGA-NDLPMIKAAGLGIAY 289 (322)
T ss_pred -EeEecCccCCcccHHHHH-----HHHHHHcCCChhhEEEEECCH-HHHHHHHHCCCeEEe
Confidence 000000000011123343 448999999999999999999 789888899986553
No 73
>TIGR01452 PGP_euk phosphoglycolate/pyridoxal phosphate phosphatase family. This model is closely related to a family of bacterial sequences including the E. coli NagD and B. subtilus AraL genes which are characterized by the ability to hydrolyze para-nitrophenylphosphate (pNPPases or NPPases). The chlamydomonas PGPase does not catalyze this reaction and so presumably these two groups have different functions and substrate specificities. Many of the genes in this alignment have been annotated as pNPPases due to this association.
Probab=98.43 E-value=4e-08 Score=98.99 Aligned_cols=102 Identities=18% Similarity=0.206 Sum_probs=74.5
Q ss_pred hhHHHHHHHHHHcCCeEEEEeCCChHHHHH-hhhhhhccCCCCCCCcCCCccEEEEc-CCCCCCCCCCCCccccccCcCc
Q 011157 221 GQVLQFVKMLREKGKKLFLLTNSPYYFVDG-GMRFMLEDSTGYTDSWRELFDVVIAQ-ANKPDFYTSDHPFRCYDTEKDT 298 (492)
Q Consensus 221 p~l~~~L~~Lk~~GkklfL~TNS~~~y~~~-vm~~l~~~~~~~g~~w~~yFD~iI~~-a~KP~FF~~~~pfr~vd~~~gk 298 (492)
+++...|+.|++.|. ++++||.+..+... ++.. .+...+|+.+... ..+|. ..||
T Consensus 146 ~~i~~~l~~L~~~g~-~~i~Tn~d~~~~~~~~~~~---------~~~g~~~~~i~~~~g~~~~-------------~~gK 202 (279)
T TIGR01452 146 AKLREACAHLREPGC-LFVATNRDPWHPLSDGSRT---------PGTGSLVAAIETASGRQPL-------------VVGK 202 (279)
T ss_pred HHHHHHHHHHhcCCC-EEEEeCCCCCCCCcCCCcc---------cChHHHHHHHHHHhCCcee-------------ccCC
Confidence 688999999998887 89999998765421 1111 2444567655432 12221 2355
Q ss_pred cccccccccCCCeeeccCCHHHHHHHhCCCCCcEEEEcccccccccccccCCcEEEEEecc
Q 011157 299 LAFTKVDAFIPNKIYYHGCLKSFLQITKWNGPEVIYFGDHLFSDLRGPSKAGWRTAAIIHE 359 (492)
Q Consensus 299 ~~~~~~~~l~~~~vY~~G~~~~~~~~lg~~~~~vLyvGDhi~gDI~~ak~~GwrT~~VvpE 359 (492)
|+ +.+|.. +++.+|+++++|++|||++.+||.+|+++||+|++|...
T Consensus 203 P~---------p~~~~~-----~~~~~~~~~~~~lmIGD~~~tDI~~A~~aGi~si~V~~G 249 (279)
T TIGR01452 203 PS---------PYMFEC-----ITENFSIDPARTLMVGDRLETDILFGHRCGMTTVLVLSG 249 (279)
T ss_pred CC---------HHHHHH-----HHHHhCCChhhEEEECCChHHHHHHHHHcCCcEEEECCC
Confidence 55 556666 899999999999999999999999999999999999543
No 74
>TIGR01459 HAD-SF-IIA-hyp4 HAD-superfamily class IIA hydrolase, TIGR01459. This hypothetical equivalog is a member of the Class IIA subfamily of the haloacid dehalogenase superfamily of aspartate-nucleophile hydrolases. The sequences modelled by this equivalog are all gram negative and primarily alpha proteobacteria. Only one sequence hase been annotated as other than "hypothetical." That one, from Brucella, is annotated as related to NagD, but only by sequence similarity and should be treated with some skepticism. (See comments for Class IIA subfamily)
Probab=98.37 E-value=1e-07 Score=93.85 Aligned_cols=100 Identities=12% Similarity=0.117 Sum_probs=75.1
Q ss_pred hhHHHHHHHHHHcCCeEEEEeCCChHHHHHhhhhhhccCCCCCCCcCCCccEEEEcCCCCCCCCCCCCccccccCcCccc
Q 011157 221 GQVLQFVKMLREKGKKLFLLTNSPYYFVDGGMRFMLEDSTGYTDSWRELFDVVIAQANKPDFYTSDHPFRCYDTEKDTLA 300 (492)
Q Consensus 221 p~l~~~L~~Lk~~GkklfL~TNS~~~y~~~vm~~l~~~~~~~g~~w~~yFD~iI~~a~KP~FF~~~~pfr~vd~~~gk~~ 300 (492)
|++..+|+.+++.|.++ ++||.+..+....+..+ +.-.+|+.+...+.+|. ..|||+
T Consensus 141 ~~~~~~l~~l~~~g~~~-i~tN~d~~~~~~~~~~~---------~~g~~~~~i~~~g~~~~-------------~~gKP~ 197 (242)
T TIGR01459 141 DEFDELFAPIVARKIPN-ICANPDRGINQHGIYRY---------GAGYYAELIKQLGGKVI-------------YSGKPY 197 (242)
T ss_pred HHHHHHHHHHHhCCCcE-EEECCCEeccCCCceEe---------cccHHHHHHHHhCCcEe-------------cCCCCC
Confidence 68888999998899986 89999999987655432 34456665422222331 235665
Q ss_pred cccccccCCCeeeccCCHHHHHHHhCCC-CCcEEEEcccccccccccccCCcEEEEEe
Q 011157 301 FTKVDAFIPNKIYYHGCLKSFLQITKWN-GPEVIYFGDHLFSDLRGPSKAGWRTAAII 357 (492)
Q Consensus 301 ~~~~~~l~~~~vY~~G~~~~~~~~lg~~-~~~vLyvGDhi~gDI~~ak~~GwrT~~Vv 357 (492)
+.+|.. +++.+|.. .++|++|||++.+||.+|+++||+|++|.
T Consensus 198 ---------~~~~~~-----~~~~~~~~~~~~~~~vGD~~~~Di~~a~~~G~~~i~v~ 241 (242)
T TIGR01459 198 ---------PAIFHK-----ALKECSNIPKNRMLMVGDSFYTDILGANRLGIDTALVL 241 (242)
T ss_pred ---------HHHHHH-----HHHHcCCCCcccEEEECCCcHHHHHHHHHCCCeEEEEe
Confidence 666666 89999875 56899999999999999999999999983
No 75
>PTZ00445 p36-lilke protein; Provisional
Probab=98.37 E-value=6.6e-07 Score=86.80 Aligned_cols=141 Identities=18% Similarity=0.229 Sum_probs=107.4
Q ss_pred HHHHHHHHHhhhhhhhHHHHhcCccchhcc-chhHHHHHHHHHHcCCeEEEEeCCChH---------------HHHHhhh
Q 011157 190 EDVNRAIQHVHRRGLVHRGILSDPNRYLVK-NGQVLQFVKMLREKGKKLFLLTNSPYY---------------FVDGGMR 253 (492)
Q Consensus 190 ~DV~~av~~vh~~G~lk~~v~~np~kYi~k-~p~l~~~L~~Lk~~GkklfL~TNS~~~---------------y~~~vm~ 253 (492)
-|.-..+..+|..|...+. +++..++.. .|++..|+.+|++.|++++++|=|+-. .++..|+
T Consensus 48 ~D~DnTlI~~HsgG~~~~~--~~~~~~~~~~tpefk~~~~~l~~~~I~v~VVTfSd~~~~~~~~~~~~Isg~~li~~~lk 125 (219)
T PTZ00445 48 SDFDLTMITKHSGGYIDPD--NDDIRVLTSVTPDFKILGKRLKNSNIKISVVTFSDKELIPSENRPRYISGDRMVEAALK 125 (219)
T ss_pred ecchhhhhhhhcccccCCC--cchhhhhccCCHHHHHHHHHHHHCCCeEEEEEccchhhccccCCcceechHHHHHHHHH
Confidence 3444556678999977766 678888887 689999999999999999999999874 4556555
Q ss_pred hhhccCCCCCCCcCCCccEEEEcCCCCCCCCCCCCccccccCcCccccccccccCCCee--eccCCHHHHHHHhCCCCCc
Q 011157 254 FMLEDSTGYTDSWRELFDVVIAQANKPDFYTSDHPFRCYDTEKDTLAFTKVDAFIPNKI--YYHGCLKSFLQITKWNGPE 331 (492)
Q Consensus 254 ~l~~~~~~~g~~w~~yFD~iI~~a~KP~FF~~~~pfr~vd~~~gk~~~~~~~~l~~~~v--Y~~G~~~~~~~~lg~~~~~ 331 (492)
+- +. -|++..+.|-=|.|..+..-++.+-. -||. |++ |- ++++++..|+.+++
T Consensus 126 ~s-------~~----~~~i~~~~~yyp~~w~~p~~y~~~gl--~KPd---------p~iK~yH---le~ll~~~gl~peE 180 (219)
T PTZ00445 126 KS-------KC----DFKIKKVYAYYPKFWQEPSDYRPLGL--DAPM---------PLDKSYH---LKQVCSDFNVNPDE 180 (219)
T ss_pred hc-------Cc----cceeeeeeeeCCcccCChhhhhhhcc--cCCC---------ccchHHH---HHHHHHHcCCCHHH
Confidence 41 22 36788888888999987654433221 1333 545 61 15599999999999
Q ss_pred EEEEcccccccccccccCCcEEEEEec
Q 011157 332 VIYFGDHLFSDLRGPSKAGWRTAAIIH 358 (492)
Q Consensus 332 vLyvGDhi~gDI~~ak~~GwrT~~Vvp 358 (492)
||+|.|..-. |.+|++.||.|+.+.+
T Consensus 181 ~LFIDD~~~N-VeaA~~lGi~ai~f~~ 206 (219)
T PTZ00445 181 ILFIDDDMNN-CKNALKEGYIALHVTG 206 (219)
T ss_pred eEeecCCHHH-HHHHHHCCCEEEEcCC
Confidence 9999999999 9899999999999853
No 76
>PRK11009 aphA acid phosphatase/phosphotransferase; Provisional
Probab=98.23 E-value=4.9e-06 Score=82.60 Aligned_cols=108 Identities=15% Similarity=0.234 Sum_probs=76.8
Q ss_pred hHHHHhcCccchhccchhHHHHHHHHHHcCCeEEEEeCCC----hHHHHHhhhhhhccCCCCCCCcCCCccEEEEcCCCC
Q 011157 205 VHRGILSDPNRYLVKNGQVLQFVKMLREKGKKLFLLTNSP----YYFVDGGMRFMLEDSTGYTDSWRELFDVVIAQANKP 280 (492)
Q Consensus 205 lk~~v~~np~kYi~k~p~l~~~L~~Lk~~GkklfL~TNS~----~~y~~~vm~~l~~~~~~~g~~w~~yFD~iI~~a~KP 280 (492)
+.+.+.++...+..+-|++.++|++|++.|.+++++||.+ ...++.+++.+ |.+-.++|++++++.. +
T Consensus 101 fw~~y~~~~~~~a~p~~Ga~elL~~L~~~G~~I~iVTnR~~~k~~~t~~~Llk~~-------gip~~~~f~vil~gd~-~ 172 (237)
T PRK11009 101 FWEKMNNGWDEFSIPKEVARQLIDMHVKRGDSIYFITGRTATKTETVSKTLADDF-------HIPADNMNPVIFAGDK-P 172 (237)
T ss_pred HHHHHHhcccccCcchHHHHHHHHHHHHCCCeEEEEeCCCCcccHHHHHHHHHHc-------CCCcccceeEEEcCCC-C
Confidence 4455555556667778899999999999999999999953 55666666632 3322779998887662 1
Q ss_pred CCCCCCCCccccccCcCccccccccccCCCeeeccCCHHHHHHHhCCCCCcEEEEcccccccccccccCCcEEEEEec
Q 011157 281 DFYTSDHPFRCYDTEKDTLAFTKVDAFIPNKIYYHGCLKSFLQITKWNGPEVIYFGDHLFSDLRGPSKAGWRTAAIIH 358 (492)
Q Consensus 281 ~FF~~~~pfr~vd~~~gk~~~~~~~~l~~~~vY~~G~~~~~~~~lg~~~~~vLyvGDhi~gDI~~ak~~GwrT~~Vvp 358 (492)
.|+. . ...++..|+ ++||||+... +.+|+++|.+++.|..
T Consensus 173 ----------------~K~~----------K-------~~~l~~~~i----~I~IGDs~~D-i~aA~~AGi~~I~v~~ 212 (237)
T PRK11009 173 ----------------GQYT----------K-------TQWLKKKNI----RIFYGDSDND-ITAAREAGARGIRILR 212 (237)
T ss_pred ----------------CCCC----------H-------HHHHHhcCC----eEEEcCCHHH-HHHHHHcCCcEEEEec
Confidence 1110 0 114444444 9999999987 8899999999999954
No 77
>PRK09552 mtnX 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate phosphatase; Reviewed
Probab=98.21 E-value=3.8e-06 Score=81.38 Aligned_cols=104 Identities=13% Similarity=0.155 Sum_probs=69.1
Q ss_pred hccchhHHHHHHHHHHcCCeEEEEeCCChHHHHHhhhhhhccCCCCCCCcCCCccEEEEcCCCCCCCCCCCCccccccCc
Q 011157 217 LVKNGQVLQFVKMLREKGKKLFLLTNSPYYFVDGGMRFMLEDSTGYTDSWRELFDVVIAQANKPDFYTSDHPFRCYDTEK 296 (492)
Q Consensus 217 i~k~p~l~~~L~~Lk~~GkklfL~TNS~~~y~~~vm~~l~~~~~~~g~~w~~yFD~iI~~a~KP~FF~~~~pfr~vd~~~ 296 (492)
+...|++.++|+.|++.|.+++++||+...+++.+++.++ .+ +.|++... -|+.+ +...
T Consensus 73 ~~l~pG~~e~l~~l~~~g~~~~IvS~~~~~~i~~il~~~~----------~~--~~i~~n~~---~~~~~------~~~~ 131 (219)
T PRK09552 73 AEIREGFHEFVQFVKENNIPFYVVSGGMDFFVYPLLQGLI----------PK--EQIYCNGS---DFSGE------YITI 131 (219)
T ss_pred CCcCcCHHHHHHHHHHcCCeEEEECCCcHHHHHHHHHHhC----------Cc--CcEEEeEE---EecCC------eeEE
Confidence 4568999999999999999999999999999999998742 11 12222110 01000 0011
Q ss_pred CccccccccccCCCee-----eccCCHHHHHHHhCCCCCcEEEEcccccccccccccCCc
Q 011157 297 DTLAFTKVDAFIPNKI-----YYHGCLKSFLQITKWNGPEVIYFGDHLFSDLRGPSKAGW 351 (492)
Q Consensus 297 gk~~~~~~~~l~~~~v-----Y~~G~~~~~~~~lg~~~~~vLyvGDhi~gDI~~ak~~Gw 351 (492)
++|. |.+ .++.+-..+++.++..+++|+||||+.. |+.+|+++|+
T Consensus 132 ~kp~---------p~~~~~~~~~~~~K~~~l~~~~~~~~~~i~iGDs~~-Di~aa~~Ag~ 181 (219)
T PRK09552 132 TWPH---------PCDEHCQNHCGCCKPSLIRKLSDTNDFHIVIGDSIT-DLEAAKQADK 181 (219)
T ss_pred eccC---------CccccccccCCCchHHHHHHhccCCCCEEEEeCCHH-HHHHHHHCCc
Confidence 1111 111 0112233578888999999999999976 5988999999
No 78
>TIGR02726 phenyl_P_delta phenylphosphate carboxylase, delta subunit. Members of this protein family are the alpha subunit of phenylphosphate carboxylase. Phenol (methyl-benzene) is converted to phenylphosphate, then para-carboxylated by this four-subunit enzyme, with the release of phosphate, to 4-hydroxybenzoate. The enzyme contains neither biotin nor thiamin pyrophosphate. This delta subunit belongs to HAD family hydrolases.
Probab=98.16 E-value=1.3e-06 Score=82.37 Aligned_cols=81 Identities=22% Similarity=0.284 Sum_probs=65.8
Q ss_pred HHHHHHcCCeEEEEeCCChHHHHHhhhhhhccCCCCCCCcCCCccEEEEcCCCCCCCCCCCCccccccCcCccccccccc
Q 011157 227 VKMLREKGKKLFLLTNSPYYFVDGGMRFMLEDSTGYTDSWRELFDVVIAQANKPDFYTSDHPFRCYDTEKDTLAFTKVDA 306 (492)
Q Consensus 227 L~~Lk~~GkklfL~TNS~~~y~~~vm~~l~~~~~~~g~~w~~yFD~iI~~a~KP~FF~~~~pfr~vd~~~gk~~~~~~~~ 306 (492)
++.|++.|++++++||++...++..++.+ ++.++|+.+ ||.
T Consensus 43 ~~~L~~~Gi~laIiT~k~~~~~~~~l~~l---------gi~~~f~~~-----kpk------------------------- 83 (169)
T TIGR02726 43 VIVLQLCGIDVAIITSKKSGAVRHRAEEL---------KIKRFHEGI-----KKK------------------------- 83 (169)
T ss_pred HHHHHHCCCEEEEEECCCcHHHHHHHHHC---------CCcEEEecC-----CCC-------------------------
Confidence 56788899999999999999999999985 777888742 331
Q ss_pred cCCCeeeccCCHHHHHHHhCCCCCcEEEEcccccccccccccCCcEEEE
Q 011157 307 FIPNKIYYHGCLKSFLQITKWNGPEVIYFGDHLFSDLRGPSKAGWRTAA 355 (492)
Q Consensus 307 l~~~~vY~~G~~~~~~~~lg~~~~~vLyvGDhi~gDI~~ak~~GwrT~~ 355 (492)
|++| ..+++.+|+++++|+||||+. .|+..++.+|+..+.
T Consensus 84 ---p~~~-----~~~~~~l~~~~~ev~~iGD~~-nDi~~~~~ag~~~am 123 (169)
T TIGR02726 84 ---TEPY-----AQMLEEMNISDAEVCYVGDDL-VDLSMMKRVGLAVAV 123 (169)
T ss_pred ---HHHH-----HHHHHHcCcCHHHEEEECCCH-HHHHHHHHCCCeEEC
Confidence 3333 349999999999999999998 689888899987553
No 79
>PRK11590 hypothetical protein; Provisional
Probab=98.09 E-value=7.8e-05 Score=72.04 Aligned_cols=94 Identities=14% Similarity=0.009 Sum_probs=62.5
Q ss_pred ccchhHHHHH-HHHHHcCCeEEEEeCCChHHHHHhhhhhhccCCCCCCCcCCCccEEEEcCCCCCCCCCCCCccccccCc
Q 011157 218 VKNGQVLQFV-KMLREKGKKLFLLTNSPYYFVDGGMRFMLEDSTGYTDSWRELFDVVIAQANKPDFYTSDHPFRCYDTEK 296 (492)
Q Consensus 218 ~k~p~l~~~L-~~Lk~~GkklfL~TNS~~~y~~~vm~~l~~~~~~~g~~w~~yFD~iI~~a~KP~FF~~~~pfr~vd~~~ 296 (492)
..-|++.+.| +.+++.|.+++++|||+..++..++.++ +|..- |-+|+.. .. + .-+
T Consensus 95 ~~~pga~e~L~~~l~~~G~~l~IvSas~~~~~~~il~~l---------~~~~~-~~~i~t~--l~----------~-~~t 151 (211)
T PRK11590 95 TAFPVVQERLTTYLLSSDADVWLITGSPQPLVEQVYFDT---------PWLPR-VNLIASQ--MQ----------R-RYG 151 (211)
T ss_pred cCCccHHHHHHHHHHhCCCEEEEEeCCcHHHHHHHHHHc---------ccccc-CceEEEE--EE----------E-EEc
Confidence 4478999999 5788899999999999999999999985 55443 3344222 10 0 112
Q ss_pred CccccccccccCCCeeeccCCHHHHHHHhCCCCCcEEEEcccccccc
Q 011157 297 DTLAFTKVDAFIPNKIYYHGCLKSFLQITKWNGPEVIYFGDHLFSDL 343 (492)
Q Consensus 297 gk~~~~~~~~l~~~~vY~~G~~~~~~~~lg~~~~~vLyvGDhi~gDI 343 (492)
|+.. .+..|-.|=...+.+.+|.+.+.+-..|||+ +|+
T Consensus 152 g~~~--------g~~c~g~~K~~~l~~~~~~~~~~~~aY~Ds~-~D~ 189 (211)
T PRK11590 152 GWVL--------TLRCLGHEKVAQLERKIGTPLRLYSGYSDSK-QDN 189 (211)
T ss_pred cEEC--------CccCCChHHHHHHHHHhCCCcceEEEecCCc-ccH
Confidence 3221 1223333335556666676777788899999 887
No 80
>TIGR01490 HAD-SF-IB-hyp1 HAD-superfamily subfamily IB hydrolase, TIGR01490. A subset of these sequences, including the Caulobacter crescentus CicA protein, cluster together and may represent a separate equivalog.
Probab=98.09 E-value=7.3e-06 Score=77.63 Aligned_cols=107 Identities=15% Similarity=0.170 Sum_probs=72.4
Q ss_pred cchhHHHHHHHHHHcCCeEEEEeCCChHHHHHhhhhhhccCCCCCCCcCCCccE-EEEcCCCCCCCCCCCCccccccCcC
Q 011157 219 KNGQVLQFVKMLREKGKKLFLLTNSPYYFVDGGMRFMLEDSTGYTDSWRELFDV-VIAQANKPDFYTSDHPFRCYDTEKD 297 (492)
Q Consensus 219 k~p~l~~~L~~Lk~~GkklfL~TNS~~~y~~~vm~~l~~~~~~~g~~w~~yFD~-iI~~a~KP~FF~~~~pfr~vd~~~g 297 (492)
..|++.++|+.++++|.+++|+|||+..++..+++++ ++..+|.. +++... ..-+|
T Consensus 88 ~~~~~~~~l~~l~~~g~~v~ivS~s~~~~v~~~~~~l---------g~~~~~~~~l~~~~~--------------g~~~g 144 (202)
T TIGR01490 88 LYPEARDLIRWHKAEGHTIVLVSASLTILVKPLARIL---------GIDNAIGTRLEESED--------------GIYTG 144 (202)
T ss_pred ccHHHHHHHHHHHHCCCEEEEEeCCcHHHHHHHHHHc---------CCcceEecceEEcCC--------------CEEeC
Confidence 3579999999999999999999999999999999875 66677765 333121 00112
Q ss_pred ccccccccccCCCeeeccC---CHHHHHHHhCCCCCcEEEEcccccccccccccCCcEEEEEec
Q 011157 298 TLAFTKVDAFIPNKIYYHG---CLKSFLQITKWNGPEVIYFGDHLFSDLRGPSKAGWRTAAIIH 358 (492)
Q Consensus 298 k~~~~~~~~l~~~~vY~~G---~~~~~~~~lg~~~~~vLyvGDhi~gDI~~ak~~GwrT~~Vvp 358 (492)
++.. +..+..+ .+.++++..+.++++|+++||+. +|+-.++.+|..+ +|.|
T Consensus 145 ~~~~--------~~~~g~~K~~~l~~~~~~~~~~~~~~~~~gDs~-~D~~~~~~a~~~~-~v~~ 198 (202)
T TIGR01490 145 NIDG--------NNCKGEGKVHALAELLAEEQIDLKDSYAYGDSI-SDLPLLSLVGHPY-VVNP 198 (202)
T ss_pred CccC--------CCCCChHHHHHHHHHHHHcCCCHHHcEeeeCCc-ccHHHHHhCCCcE-EeCC
Confidence 2110 0011011 13456677788899999999999 6897777788554 4434
No 81
>TIGR01489 DKMTPPase-SF 2,3-diketo-5-methylthio-1-phosphopentane phosphatase. Note that SP|P53981 from S. cerevisiae, a member of this family, is annotated as a "probable membrane protein" due to a predicted transmembrane helix. The region in question contains the second of the three conserved HAD superfamily catalytic motifs and thus, considering the fold of the HAD catalytic domain, is unlikely to be a transmembrane region in fact.
Probab=98.07 E-value=1.5e-05 Score=74.10 Aligned_cols=111 Identities=11% Similarity=0.196 Sum_probs=69.7
Q ss_pred hccchhHHHHHHHHHHcCCeEEEEeCCChHHHHHhhhhhhccCCCCCCCcCCCccEEEEcCCCCCCCCCCCCccccccCc
Q 011157 217 LVKNGQVLQFVKMLREKGKKLFLLTNSPYYFVDGGMRFMLEDSTGYTDSWRELFDVVIAQANKPDFYTSDHPFRCYDTEK 296 (492)
Q Consensus 217 i~k~p~l~~~L~~Lk~~GkklfL~TNS~~~y~~~vm~~l~~~~~~~g~~w~~yFD~iI~~a~KP~FF~~~~pfr~vd~~~ 296 (492)
+...|++.++|+.|++.|.+++++||+...++..+++.+ +|.++||.|+++.. .|....-+ .+.+..
T Consensus 71 ~~l~~g~~~ll~~l~~~g~~~~i~S~~~~~~~~~~l~~~---------~l~~~f~~i~~~~~---~~~~~g~~-~~~~~~ 137 (188)
T TIGR01489 71 APIDPGFKEFIAFIKEHGIDFIVISDGNDFFIDPVLEGI---------GEKDVFIEIYSNPA---SFDNDGRH-IVWPHH 137 (188)
T ss_pred CCCCccHHHHHHHHHHcCCcEEEEeCCcHHHHHHHHHHc---------CChhheeEEeccCc---eECCCCcE-EEecCC
Confidence 456788999999999999999999999999999999873 78999999887652 11111000 000000
Q ss_pred -CccccccccccCCCeeeccCCHHHHHHHhCCCCCcEEEEcccccccccccccCC
Q 011157 297 -DTLAFTKVDAFIPNKIYYHGCLKSFLQITKWNGPEVIYFGDHLFSDLRGPSKAG 350 (492)
Q Consensus 297 -gk~~~~~~~~l~~~~vY~~G~~~~~~~~lg~~~~~vLyvGDhi~gDI~~ak~~G 350 (492)
+... .......|+.++.. +.+.. +++|+||||+... +.+|++++
T Consensus 138 ~~~~~-~~~~g~~K~~~~~~-----~~~~~---~~~~i~iGD~~~D-~~aa~~~d 182 (188)
T TIGR01489 138 CHGCC-SCPCGCCKGKVIHK-----LSEPK---YQHIIYIGDGVTD-VCPAKLSD 182 (188)
T ss_pred CCccC-cCCCCCCHHHHHHH-----HHhhc---CceEEEECCCcch-hchHhcCC
Confidence 0000 00001112223222 33321 8899999999876 87887764
No 82
>PF00702 Hydrolase: haloacid dehalogenase-like hydrolase; InterPro: IPR005834 This group of hydrolase enzymes is structurally different from the alpha/beta hydrolase family (abhydrolase). This group includes L-2-haloacid dehalogenase, epoxide hydrolases and phosphatases. The structure consists of two domains. One is an inserted four helix bundle, which is the least well conserved region of the alignment, between residues 16 and 96 of HAD1_PSESP. The rest of the fold is composed of the core alpha/beta domain.; GO: 0003824 catalytic activity, 0008152 metabolic process; PDB: 1TE2_A 3NAL_A 3NAM_A 3NAN_A 3A1D_B 3J09_A 3J08_A 2B8E_C 3A1E_A 2VOY_J ....
Probab=98.06 E-value=3.6e-06 Score=79.47 Aligned_cols=85 Identities=22% Similarity=0.291 Sum_probs=70.1
Q ss_pred chhHHHHHHHHHHcCCeEEEEeCCChHHHHHhhhhhhccCCCCCCCcCCCccEEEEcCC--CCCCCCCCCCccccccCcC
Q 011157 220 NGQVLQFVKMLREKGKKLFLLTNSPYYFVDGGMRFMLEDSTGYTDSWRELFDVVIAQAN--KPDFYTSDHPFRCYDTEKD 297 (492)
Q Consensus 220 ~p~l~~~L~~Lk~~GkklfL~TNS~~~y~~~vm~~l~~~~~~~g~~w~~yFD~iI~~a~--KP~FF~~~~pfr~vd~~~g 297 (492)
.|++.++|+.||++|+++.++|+.+...+..+.+.+ ++ ++.+|.+.. ||
T Consensus 129 ~~~~~~~l~~L~~~Gi~~~i~TGD~~~~a~~~~~~l---------gi---~~~~v~a~~~~kP----------------- 179 (215)
T PF00702_consen 129 RPGAKEALQELKEAGIKVAILTGDNESTASAIAKQL---------GI---FDSIVFARVIGKP----------------- 179 (215)
T ss_dssp HTTHHHHHHHHHHTTEEEEEEESSEHHHHHHHHHHT---------TS---CSEEEEESHETTT-----------------
T ss_pred hhhhhhhhhhhhccCcceeeeecccccccccccccc---------cc---ccccccccccccc-----------------
Confidence 479999999999999999999999999999999985 32 566666664 55
Q ss_pred ccccccccccCCCeeeccCCHHHHHHHhCCCCCcEEEEcccccccccccccCC
Q 011157 298 TLAFTKVDAFIPNKIYYHGCLKSFLQITKWNGPEVIYFGDHLFSDLRGPSKAG 350 (492)
Q Consensus 298 k~~~~~~~~l~~~~vY~~G~~~~~~~~lg~~~~~vLyvGDhi~gDI~~ak~~G 350 (492)
. +++|.. +++.+++++.+|++|||.+ .|+.+++++|
T Consensus 180 --~---------~k~~~~-----~i~~l~~~~~~v~~vGDg~-nD~~al~~Ag 215 (215)
T PF00702_consen 180 --E---------PKIFLR-----IIKELQVKPGEVAMVGDGV-NDAPALKAAG 215 (215)
T ss_dssp --H---------HHHHHH-----HHHHHTCTGGGEEEEESSG-GHHHHHHHSS
T ss_pred --c---------chhHHH-----HHHHHhcCCCEEEEEccCH-HHHHHHHhCc
Confidence 2 334433 9999999999999999999 8898777775
No 83
>TIGR01686 FkbH FkbH-like domain. The C-terminal portion of this domain is unique to this family (by BLAST).
Probab=98.05 E-value=6.3e-06 Score=84.87 Aligned_cols=90 Identities=12% Similarity=0.044 Sum_probs=72.1
Q ss_pred chhHHHHHHHHHHcCCeEEEEeCCChHHHHHhhhhhhccCCCCCCCcCCCccEEEEcCCCCCCCCCCCCccccccCcCcc
Q 011157 220 NGQVLQFVKMLREKGKKLFLLTNSPYYFVDGGMRFMLEDSTGYTDSWRELFDVVIAQANKPDFYTSDHPFRCYDTEKDTL 299 (492)
Q Consensus 220 ~p~l~~~L~~Lk~~GkklfL~TNS~~~y~~~vm~~l~~~~~~~g~~w~~yFD~iI~~a~KP~FF~~~~pfr~vd~~~gk~ 299 (492)
.|++.++|+.|++.|++++++||++...+..+++. ++.-....++|+.++.+ .||.
T Consensus 33 ~~~~~e~L~~L~~~Gi~lai~S~n~~~~a~~~l~~-----~~~~~~~~~~f~~~~~~-~~pk------------------ 88 (320)
T TIGR01686 33 HKTLQEKIKTLKKQGFLLALASKNDEDDAKKVFER-----RKDFILQAEDFDARSIN-WGPK------------------ 88 (320)
T ss_pred HHHHHHHHHHHHhCCCEEEEEcCCCHHHHHHHHHh-----CccccCcHHHeeEEEEe-cCch------------------
Confidence 57899999999999999999999999999998876 11113677899998665 4551
Q ss_pred ccccccccCCCeeeccCCHHHHHHHhCCCCCcEEEEcccccccccccccC
Q 011157 300 AFTKVDAFIPNKIYYHGCLKSFLQITKWNGPEVIYFGDHLFSDLRGPSKA 349 (492)
Q Consensus 300 ~~~~~~~l~~~~vY~~G~~~~~~~~lg~~~~~vLyvGDhi~gDI~~ak~~ 349 (492)
+ .++..+++.+|+.+++|+||||+.+. +..++++
T Consensus 89 ----------~-----~~i~~~~~~l~i~~~~~vfidD~~~d-~~~~~~~ 122 (320)
T TIGR01686 89 ----------S-----ESLRKIAKKLNLGTDSFLFIDDNPAE-RANVKIT 122 (320)
T ss_pred ----------H-----HHHHHHHHHhCCCcCcEEEECCCHHH-HHHHHHH
Confidence 1 34566999999999999999999985 8777653
No 84
>PLN02645 phosphoglycolate phosphatase
Probab=98.04 E-value=8.7e-07 Score=90.87 Aligned_cols=101 Identities=13% Similarity=0.140 Sum_probs=70.6
Q ss_pred HHHHHHHHHHcCCeEEEEeCCChHH-HHHhhhhhhccCCCCCCCcCCCccEEEEcCC-CCCCCCCCCCccccccCcCccc
Q 011157 223 VLQFVKMLREKGKKLFLLTNSPYYF-VDGGMRFMLEDSTGYTDSWRELFDVVIAQAN-KPDFYTSDHPFRCYDTEKDTLA 300 (492)
Q Consensus 223 l~~~L~~Lk~~GkklfL~TNS~~~y-~~~vm~~l~~~~~~~g~~w~~yFD~iI~~a~-KP~FF~~~~pfr~vd~~~gk~~ 300 (492)
+.....-|+..+.-++++||.+..+ ....+.+ .+.-.+|+.++.... +|.+ .|||.
T Consensus 175 l~~a~~~l~~~~g~~~i~tn~d~~~~~~~~~~~---------~g~g~~~~~i~~~~~~~~~~-------------~gKP~ 232 (311)
T PLN02645 175 IQYATLCIRENPGCLFIATNRDAVTHLTDAQEW---------AGAGSMVGAIKGSTEREPLV-------------VGKPS 232 (311)
T ss_pred HHHHHHHHhcCCCCEEEEeCCCCCCCCCCCCCc---------cchHHHHHHHHHHhCCCccc-------------CCCCh
Confidence 3444445554334599999999755 2333222 245567877766543 3322 24555
Q ss_pred cccccccCCCeeeccCCHHHHHHHhCCCCCcEEEEcccccccccccccCCcEEEEEecc
Q 011157 301 FTKVDAFIPNKIYYHGCLKSFLQITKWNGPEVIYFGDHLFSDLRGPSKAGWRTAAIIHE 359 (492)
Q Consensus 301 ~~~~~~l~~~~vY~~G~~~~~~~~lg~~~~~vLyvGDhi~gDI~~ak~~GwrT~~VvpE 359 (492)
+.+|.. +++.+|+++++|+||||++..||..|+++||+|++|...
T Consensus 233 ---------p~~~~~-----a~~~~~~~~~~~~~VGD~~~~Di~~A~~aG~~~ilV~~G 277 (311)
T PLN02645 233 ---------TFMMDY-----LANKFGIEKSQICMVGDRLDTDILFGQNGGCKTLLVLSG 277 (311)
T ss_pred ---------HHHHHH-----HHHHcCCCcccEEEEcCCcHHHHHHHHHcCCCEEEEcCC
Confidence 666666 899999999999999999999999999999999999544
No 85
>TIGR02251 HIF-SF_euk Dullard-like phosphatase domain. This domain is related to domains found in FCP1-like phosphatases (TIGR02250), and together both are detected by the Pfam model pfam03031.
Probab=98.01 E-value=1.4e-05 Score=74.54 Aligned_cols=105 Identities=14% Similarity=0.131 Sum_probs=79.3
Q ss_pred CccchhccchhHHHHHHHHHHcCCeEEEEeCCChHHHHHhhhhhhccCCCCCCCcCCCccEEEEcCCCCCCCCCCCCccc
Q 011157 212 DPNRYLVKNGQVLQFVKMLREKGKKLFLLTNSPYYFVDGGMRFMLEDSTGYTDSWRELFDVVIAQANKPDFYTSDHPFRC 291 (492)
Q Consensus 212 np~kYi~k~p~l~~~L~~Lk~~GkklfL~TNS~~~y~~~vm~~l~~~~~~~g~~w~~yFD~iI~~a~KP~FF~~~~pfr~ 291 (492)
+..-|+.+.|++.++|+.|.+. ..++|.|++...|++.+++.+ .....+|+.++....
T Consensus 36 ~~~~~v~~RPgl~eFL~~l~~~-yei~I~Ts~~~~yA~~il~~l--------dp~~~~f~~~l~r~~------------- 93 (162)
T TIGR02251 36 IIPVYVFKRPHVDEFLERVSKW-YELVIFTASLEEYADPVLDIL--------DRGGKVISRRLYRES------------- 93 (162)
T ss_pred EEEEEEEECCCHHHHHHHHHhc-CEEEEEcCCcHHHHHHHHHHH--------CcCCCEEeEEEEccc-------------
Confidence 5577899999999999999987 999999999999999999986 234568888887551
Q ss_pred cccCcCccccccccccCCCeeeccCCHHHHHHHhCCCCCcEEEEcccccccccccccCCcEEEEEec
Q 011157 292 YDTEKDTLAFTKVDAFIPNKIYYHGCLKSFLQITKWNGPEVIYFGDHLFSDLRGPSKAGWRTAAIIH 358 (492)
Q Consensus 292 vd~~~gk~~~~~~~~l~~~~vY~~G~~~~~~~~lg~~~~~vLyvGDhi~gDI~~ak~~GwrT~~Vvp 358 (492)
+...+ |. |.. .+..+|.+.++|++|||.... +..+...|..+..-..
T Consensus 94 --~~~~~-----------~~-~~K-----~L~~l~~~~~~vIiVDD~~~~-~~~~~~NgI~i~~f~~ 140 (162)
T TIGR02251 94 --CVFTN-----------GK-YVK-----DLSLVGKDLSKVIIIDNSPYS-YSLQPDNAIPIKSWFG 140 (162)
T ss_pred --cEEeC-----------CC-EEe-----EchhcCCChhhEEEEeCChhh-hccCccCEeecCCCCC
Confidence 11000 11 222 566688899999999999976 7666677776655543
No 86
>TIGR03333 salvage_mtnX 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate phosphatase. Members of this family are the methionine salvage enzyme MnxX, a member of the HAD-superfamily hydrolases, subfamily IB (see TIGR01488). Members are found in Bacillus subtilis and related species, paired with MtnW (TIGR03332). In most species that recycle methionine from methylthioadenosine, the single protein MtnC replaces the MtnW/MtnX pair. In B. subtilis, mtnX was first known as ykrX.
Probab=98.00 E-value=2.8e-05 Score=75.18 Aligned_cols=101 Identities=13% Similarity=0.180 Sum_probs=67.6
Q ss_pred hccchhHHHHHHHHHHcCCeEEEEeCCChHHHHHhhhhhhccCCCCCCCcCCCc---cEEEEcCCCCCCCCCCCCccccc
Q 011157 217 LVKNGQVLQFVKMLREKGKKLFLLTNSPYYFVDGGMRFMLEDSTGYTDSWRELF---DVVIAQANKPDFYTSDHPFRCYD 293 (492)
Q Consensus 217 i~k~p~l~~~L~~Lk~~GkklfL~TNS~~~y~~~vm~~l~~~~~~~g~~w~~yF---D~iI~~a~KP~FF~~~~pfr~vd 293 (492)
+...|++.++|+.|++.|.+++|+|||...+++.+++.+. . .++| +.++.+.. +
T Consensus 69 ~~l~pg~~e~l~~l~~~g~~~~IvS~~~~~~i~~il~~~~-------~--~~~i~~n~~~~~~~~----~---------- 125 (214)
T TIGR03333 69 AEIREGFREFVAFINEHGIPFYVISGGMDFFVYPLLEGIV-------E--KDRIYCNEADFSNEY----I---------- 125 (214)
T ss_pred CcccccHHHHHHHHHHCCCeEEEECCCcHHHHHHHHHhhC-------C--cccEEeceeEeeCCe----e----------
Confidence 5678999999999999999999999999999999998741 1 1222 22222210 0
Q ss_pred cCcCccccccccccCCCeeecc----CCH-HHHHHHhCCCCCcEEEEcccccccccccccCCc
Q 011157 294 TEKDTLAFTKVDAFIPNKIYYH----GCL-KSFLQITKWNGPEVIYFGDHLFSDLRGPSKAGW 351 (492)
Q Consensus 294 ~~~gk~~~~~~~~l~~~~vY~~----G~~-~~~~~~lg~~~~~vLyvGDhi~gDI~~ak~~Gw 351 (492)
..++|. +..+.. |.. ..+++.++..+++|+||||.... +.+|+.+|+
T Consensus 126 -~~~~p~---------~~~~~~~~~cg~~K~~~l~~~~~~~~~~i~iGDg~~D-~~~a~~Ad~ 177 (214)
T TIGR03333 126 -HIDWPH---------PCDGTCQNQCGCCKPSLIRKLSEPNDYHIVIGDSVTD-VEAAKQSDL 177 (214)
T ss_pred -EEeCCC---------CCccccccCCCCCHHHHHHHHhhcCCcEEEEeCCHHH-HHHHHhCCe
Confidence 011111 222211 222 24566666788999999999877 888888888
No 87
>COG0647 NagD Predicted sugar phosphatases of the HAD superfamily [Carbohydrate transport and metabolism]
Probab=97.99 E-value=2.9e-05 Score=78.42 Aligned_cols=44 Identities=25% Similarity=0.391 Sum_probs=39.7
Q ss_pred HHHHHHHhCCCCCcEEEEcccccccccccccCCcEEEEEeccch
Q 011157 318 LKSFLQITKWNGPEVIYFGDHLFSDLRGPSKAGWRTAAIIHELE 361 (492)
Q Consensus 318 ~~~~~~~lg~~~~~vLyvGDhi~gDI~~ak~~GwrT~~VvpEl~ 361 (492)
++.+++.+|...++|++|||++.+||..++.+||.|++|.--..
T Consensus 196 ~~~al~~~~~~~~~~~mVGD~~~TDI~~a~~~G~~t~LV~TGv~ 239 (269)
T COG0647 196 YEAALEKLGLDRSEVLMVGDRLDTDILGAKAAGLDTLLVLTGVS 239 (269)
T ss_pred HHHHHHHhCCCcccEEEEcCCchhhHHHHHHcCCCEEEEccCCC
Confidence 45688899999999999999999999999999999999976554
No 88
>TIGR01670 YrbI-phosphatas 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase, YrbI family. The Methanosarcina sequence is distinctive in that it is linked to an N-terminal cytidylyltransferase domain (pfam02348) and is annotated as acylneuraminate cytidylyltransferase. This may give some clue as the function of these phosphatases. Several eukaryotic sequences scoring between trusted and noise are also closely related to this function such as the CMP-N-acetylneuraminic acid synthetase from mouse, but in these cases the phosphatase domain is clearly inactive as many of the active site residues are not conserved.
Probab=97.97 E-value=6.6e-06 Score=75.93 Aligned_cols=85 Identities=16% Similarity=0.233 Sum_probs=67.4
Q ss_pred HHHHHHHcCCeEEEEeCCChHHHHHhhhhhhccCCCCCCCcCCCccEEEEcCCCCCCCCCCCCccccccCcCcccccccc
Q 011157 226 FVKMLREKGKKLFLLTNSPYYFVDGGMRFMLEDSTGYTDSWRELFDVVIAQANKPDFYTSDHPFRCYDTEKDTLAFTKVD 305 (492)
Q Consensus 226 ~L~~Lk~~GkklfL~TNS~~~y~~~vm~~l~~~~~~~g~~w~~yFD~iI~~a~KP~FF~~~~pfr~vd~~~gk~~~~~~~ 305 (492)
.|++|+++|.+++++||.+...+..+++.+ ++.++|+. .|| |
T Consensus 36 ~i~~Lk~~G~~i~IvTn~~~~~~~~~l~~~---------gi~~~~~~-----~~~-----------------k------- 77 (154)
T TIGR01670 36 GIRCALKSGIEVAIITGRKAKLVEDRCKTL---------GITHLYQG-----QSN-----------------K------- 77 (154)
T ss_pred HHHHHHHCCCEEEEEECCCCHHHHHHHHHc---------CCCEEEec-----ccc-----------------h-------
Confidence 699999999999999999999999988874 56666652 122 1
Q ss_pred ccCCCeeeccCCHHHHHHHhCCCCCcEEEEcccccccccccccCCcEEEEEecc
Q 011157 306 AFIPNKIYYHGCLKSFLQITKWNGPEVIYFGDHLFSDLRGPSKAGWRTAAIIHE 359 (492)
Q Consensus 306 ~l~~~~vY~~G~~~~~~~~lg~~~~~vLyvGDhi~gDI~~ak~~GwrT~~VvpE 359 (492)
++.+ ..+++.+|+++++|+||||+. .|+..++.+|.. ++|.+-
T Consensus 78 ----~~~~-----~~~~~~~~~~~~~~~~vGDs~-~D~~~~~~ag~~-~~v~~~ 120 (154)
T TIGR01670 78 ----LIAF-----SDILEKLALAPENVAYIGDDL-IDWPVMEKVGLS-VAVADA 120 (154)
T ss_pred ----HHHH-----HHHHHHcCCCHHHEEEECCCH-HHHHHHHHCCCe-EecCCc
Confidence 2233 448899999999999999997 779888999985 777543
No 89
>PLN02954 phosphoserine phosphatase
Probab=97.96 E-value=1.9e-05 Score=76.10 Aligned_cols=110 Identities=13% Similarity=0.141 Sum_probs=68.6
Q ss_pred cchhHHHHHHHHHHcCCeEEEEeCCChHHHHHhhhhhhccCCCCCCCcCCCccEEE-EcCCCCCCCCCCCCccccccC-c
Q 011157 219 KNGQVLQFVKMLREKGKKLFLLTNSPYYFVDGGMRFMLEDSTGYTDSWRELFDVVI-AQANKPDFYTSDHPFRCYDTE-K 296 (492)
Q Consensus 219 k~p~l~~~L~~Lk~~GkklfL~TNS~~~y~~~vm~~l~~~~~~~g~~w~~yFD~iI-~~a~KP~FF~~~~pfr~vd~~-~ 296 (492)
..|++.++|+.|+++|.+++|+||+...+++.+++.+ |.+-.++|+..+ +... ..+. +.+. .+.. .
T Consensus 85 l~pg~~e~l~~l~~~g~~~~IvS~~~~~~i~~~l~~~-------gi~~~~~~~~~~~~~~~--g~~~-g~~~--~~~~~~ 152 (224)
T PLN02954 85 LSPGIPELVKKLRARGTDVYLVSGGFRQMIAPVAAIL-------GIPPENIFANQILFGDS--GEYA-GFDE--NEPTSR 152 (224)
T ss_pred CCccHHHHHHHHHHCCCEEEEECCCcHHHHHHHHHHh-------CCChhhEEEeEEEEcCC--CcEE-CccC--CCcccC
Confidence 5689999999999999999999999999999999975 332225675422 2210 0000 0000 0000 0
Q ss_pred CccccccccccCCCeeeccCCHHHHHHHhCCCCCcEEEEcccccccccccccCCcEEEEEe
Q 011157 297 DTLAFTKVDAFIPNKIYYHGCLKSFLQITKWNGPEVIYFGDHLFSDLRGPSKAGWRTAAII 357 (492)
Q Consensus 297 gk~~~~~~~~l~~~~vY~~G~~~~~~~~lg~~~~~vLyvGDhi~gDI~~ak~~GwrT~~Vv 357 (492)
+++ ++.++ ..+++.+|. ++|+||||++. |+.+++.+|..+++..
T Consensus 153 ~~~---------K~~~i-----~~~~~~~~~--~~~i~iGDs~~-Di~aa~~~~~~~~~~~ 196 (224)
T PLN02954 153 SGG---------KAEAV-----QHIKKKHGY--KTMVMIGDGAT-DLEARKPGGADLFIGY 196 (224)
T ss_pred Ccc---------HHHHH-----HHHHHHcCC--CceEEEeCCHH-HHHhhhcCCCCEEEec
Confidence 000 12222 235666653 68999999998 6977777777766543
No 90
>PRK10444 UMP phosphatase; Provisional
Probab=97.92 E-value=2.1e-05 Score=78.47 Aligned_cols=43 Identities=21% Similarity=0.350 Sum_probs=38.1
Q ss_pred HHHHHHHhCCCCCcEEEEcccccccccccccCCcEEEEEeccc
Q 011157 318 LKSFLQITKWNGPEVIYFGDHLFSDLRGPSKAGWRTAAIIHEL 360 (492)
Q Consensus 318 ~~~~~~~lg~~~~~vLyvGDhi~gDI~~ak~~GwrT~~VvpEl 360 (492)
+..+++.++.++++|+||||++.+||..|+++||+|++|-...
T Consensus 180 ~~~~~~~~~~~~~~~v~IGD~~~tDi~~A~~~G~~~vlV~~G~ 222 (248)
T PRK10444 180 IRAALNKMQAHSEETVIVGDNLRTDILAGFQAGLETILVLSGV 222 (248)
T ss_pred HHHHHHHcCCCcccEEEECCCcHHHHHHHHHcCCCEEEECCCC
Confidence 3558888999999999999999999999999999999995443
No 91
>PRK09484 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase; Provisional
Probab=97.91 E-value=9.3e-06 Score=77.03 Aligned_cols=83 Identities=19% Similarity=0.260 Sum_probs=64.1
Q ss_pred HHHHHHHHcCCeEEEEeCCChHHHHHhhhhhhccCCCCCCCcCCCccEEEEcCCCCCCCCCCCCccccccCcCccccccc
Q 011157 225 QFVKMLREKGKKLFLLTNSPYYFVDGGMRFMLEDSTGYTDSWRELFDVVIAQANKPDFYTSDHPFRCYDTEKDTLAFTKV 304 (492)
Q Consensus 225 ~~L~~Lk~~GkklfL~TNS~~~y~~~vm~~l~~~~~~~g~~w~~yFD~iI~~a~KP~FF~~~~pfr~vd~~~gk~~~~~~ 304 (492)
.-++.|++.|.+++++||.+...+..+++.+ ++..+|+ +.+| |
T Consensus 55 ~~i~~L~~~Gi~v~I~T~~~~~~v~~~l~~l---------gl~~~f~-----g~~~-----------------k------ 97 (183)
T PRK09484 55 YGIRCLLTSGIEVAIITGRKSKLVEDRMTTL---------GITHLYQ-----GQSN-----------------K------ 97 (183)
T ss_pred HHHHHHHHCCCEEEEEeCCCcHHHHHHHHHc---------CCceeec-----CCCc-----------------H------
Confidence 3567788899999999999999999999875 4555654 1111 0
Q ss_pred cccCCCeeeccCCHHHHHHHhCCCCCcEEEEcccccccccccccCCcEEEEE
Q 011157 305 DAFIPNKIYYHGCLKSFLQITKWNGPEVIYFGDHLFSDLRGPSKAGWRTAAI 356 (492)
Q Consensus 305 ~~l~~~~vY~~G~~~~~~~~lg~~~~~vLyvGDhi~gDI~~ak~~GwrT~~V 356 (492)
+ ..+..+++.+|+++++|+||||++ .|+..++++|+. ++|
T Consensus 98 -----~-----~~l~~~~~~~gl~~~ev~~VGDs~-~D~~~a~~aG~~-~~v 137 (183)
T PRK09484 98 -----L-----IAFSDLLEKLAIAPEQVAYIGDDL-IDWPVMEKVGLS-VAV 137 (183)
T ss_pred -----H-----HHHHHHHHHhCCCHHHEEEECCCH-HHHHHHHHCCCe-Eec
Confidence 1 224558999999999999999997 669888999998 444
No 92
>PF13242 Hydrolase_like: HAD-hyrolase-like; PDB: 2P27_A 2OYC_A 2CFT_A 2P69_A 2CFS_A 2CFR_A 2HX1_D 2X4D_A 3HLT_C 3L1U_B ....
Probab=97.91 E-value=3e-06 Score=68.72 Aligned_cols=43 Identities=19% Similarity=0.265 Sum_probs=39.1
Q ss_pred HHHHHHhCCCCCcEEEEcccccccccccccCCcEEEEEeccch
Q 011157 319 KSFLQITKWNGPEVIYFGDHLFSDLRGPSKAGWRTAAIIHELE 361 (492)
Q Consensus 319 ~~~~~~lg~~~~~vLyvGDhi~gDI~~ak~~GwrT~~VvpEl~ 361 (492)
..+++.+++.+++|++|||++.+||.+|+++||+|++|.....
T Consensus 11 ~~a~~~~~~~~~~~~~VGD~~~~Di~~a~~~G~~~ilV~tG~~ 53 (75)
T PF13242_consen 11 EQALKRLGVDPSRCVMVGDSLETDIEAAKAAGIDTILVLTGVY 53 (75)
T ss_dssp HHHHHHHTSGGGGEEEEESSTTTHHHHHHHTTSEEEEESSSSS
T ss_pred HHHHHHcCCCHHHEEEEcCCcHhHHHHHHHcCCcEEEECCCCC
Confidence 4499999999999999999999999999999999999976543
No 93
>PRK13582 thrH phosphoserine phosphatase; Provisional
Probab=97.80 E-value=4.7e-05 Score=72.29 Aligned_cols=99 Identities=21% Similarity=0.218 Sum_probs=67.0
Q ss_pred hccchhHHHHHHHHHHcCCeEEEEeCCChHHHHHhhhhhhccCCCCCCCcCCCccEEEEcCCCCCCCCCCCCccccccCc
Q 011157 217 LVKNGQVLQFVKMLREKGKKLFLLTNSPYYFVDGGMRFMLEDSTGYTDSWRELFDVVIAQANKPDFYTSDHPFRCYDTEK 296 (492)
Q Consensus 217 i~k~p~l~~~L~~Lk~~GkklfL~TNS~~~y~~~vm~~l~~~~~~~g~~w~~yFD~iI~~a~KP~FF~~~~pfr~vd~~~ 296 (492)
+...|++.++|..|+++ .+++++||+...+++.++..+ ++..+|+..+........ +
T Consensus 67 ~~~~pg~~e~L~~L~~~-~~~~IvS~~~~~~~~~~l~~~---------gl~~~f~~~~~~~~~~~i-------------~ 123 (205)
T PRK13582 67 LDPLPGAVEFLDWLRER-FQVVILSDTFYEFAGPLMRQL---------GWPTLFCHSLEVDEDGMI-------------T 123 (205)
T ss_pred CCCCCCHHHHHHHHHhc-CCEEEEeCCcHHHHHHHHHHc---------CCchhhcceEEECCCCeE-------------E
Confidence 34569999999999999 899999999999999999874 677888654333210000 0
Q ss_pred CccccccccccCCCeeeccCCHHHHHHHhCCCCCcEEEEcccccccccccccCCc
Q 011157 297 DTLAFTKVDAFIPNKIYYHGCLKSFLQITKWNGPEVIYFGDHLFSDLRGPSKAGW 351 (492)
Q Consensus 297 gk~~~~~~~~l~~~~vY~~G~~~~~~~~lg~~~~~vLyvGDhi~gDI~~ak~~Gw 351 (492)
|... ..|. ....+++.++..+.+|+||||+. .|+..++.+|.
T Consensus 124 ~~~~-------~~p~-----~k~~~l~~~~~~~~~~v~iGDs~-~D~~~~~aa~~ 165 (205)
T PRK13582 124 GYDL-------RQPD-----GKRQAVKALKSLGYRVIAAGDSY-NDTTMLGEADA 165 (205)
T ss_pred Cccc-------cccc-----hHHHHHHHHHHhCCeEEEEeCCH-HHHHHHHhCCC
Confidence 0000 0011 11235566666789999999997 56877777776
No 94
>TIGR01457 HAD-SF-IIA-hyp2 HAD-superfamily subfamily IIA hydrolase, TIGR01457. This hypothetical equivalog is a member of the Class IIA subfamily of the haloacid dehalogenase superfamily of aspartate-nucleophile hydrolases. The sequences modelled by this equivalog are all gram positive (low-GC) bacteria. Sequences found in this model are annotated variously as related to NagD or 4-nitrophenyl phosphatase, and this hypothetical equivalog, of all of those within the Class IIA subfamily, is most closely related to the E. coli NagD enzyme and the PGP_euk equivalog (TIGR01452). However, there is presently no evidence that this hypothetical equivalog has the same function of either those.
Probab=97.78 E-value=7e-06 Score=81.57 Aligned_cols=46 Identities=20% Similarity=0.237 Sum_probs=41.1
Q ss_pred CeeeccCCHHHHHHHhCCCCCcEEEEcccccccccccccCCcEEEEEeccc
Q 011157 310 NKIYYHGCLKSFLQITKWNGPEVIYFGDHLFSDLRGPSKAGWRTAAIIHEL 360 (492)
Q Consensus 310 ~~vY~~G~~~~~~~~lg~~~~~vLyvGDhi~gDI~~ak~~GwrT~~VvpEl 360 (492)
+.+|.. +++.+|+++++|++|||++..||..|+++||+|++|....
T Consensus 181 ~~~~~~-----~~~~~~~~~~~~~~VGD~~~~Di~~a~~~G~~~v~v~~G~ 226 (249)
T TIGR01457 181 AIIMEK-----AVEHLGTEREETLMVGDNYLTDIRAGIDAGIDTLLVHTGV 226 (249)
T ss_pred HHHHHH-----HHHHcCCCcccEEEECCCchhhHHHHHHcCCcEEEEcCCC
Confidence 666666 9999999999999999999999999999999999996543
No 95
>TIGR01663 PNK-3'Pase polynucleotide 5'-kinase 3'-phosphatase. Note that the EC number for the kinase function is: 2.7.1.78
Probab=97.67 E-value=5.8e-05 Score=82.88 Aligned_cols=97 Identities=14% Similarity=0.149 Sum_probs=69.4
Q ss_pred hcCccchhccchhHHHHHHHHHHcCCeEEEEeCCCh------------HHHHHhhhhhhccCCCCCCCcCCCccEEEEcC
Q 011157 210 LSDPNRYLVKNGQVLQFVKMLREKGKKLFLLTNSPY------------YFVDGGMRFMLEDSTGYTDSWRELFDVVIAQA 277 (492)
Q Consensus 210 ~~np~kYi~k~p~l~~~L~~Lk~~GkklfL~TNS~~------------~y~~~vm~~l~~~~~~~g~~w~~yFD~iI~~a 277 (492)
..+|+.+....|++++.|++|++.|++++++||.+. ..++.+++.+ |. .||++++..
T Consensus 189 ~~~~~d~~~l~pgV~e~L~~L~~~Gy~IvIvTNQ~gI~~G~~~~~~~~~ki~~iL~~l-------gi----pfdviia~~ 257 (526)
T TIGR01663 189 PKGPDDWQIIFPEIPEKLKELEADGFKICIFTNQGGIARGKINADDFKAKIEAIVAKL-------GV----PFQVFIAIG 257 (526)
T ss_pred CCCHHHeeecccCHHHHHHHHHHCCCEEEEEECCcccccCcccHHHHHHHHHHHHHHc-------CC----ceEEEEeCC
Confidence 347777777789999999999999999999999776 3566666654 33 289877544
Q ss_pred CCCCCCCCCCCccccccCcCccccccccccCCCeeeccCCHHHHHHHhC----CCCCcEEEEcccccccccccc
Q 011157 278 NKPDFYTSDHPFRCYDTEKDTLAFTKVDAFIPNKIYYHGCLKSFLQITK----WNGPEVIYFGDHLFSDLRGPS 347 (492)
Q Consensus 278 ~KP~FF~~~~pfr~vd~~~gk~~~~~~~~l~~~~vY~~G~~~~~~~~lg----~~~~~vLyvGDhi~gDI~~ak 347 (492)
+....||. + |-|..+++.++ ++.++++||||.. ||+.+++
T Consensus 258 ---------------~~~~RKP~---------p-----Gm~~~a~~~~~~~~~Id~~~S~~VGDaa-gr~~~g~ 301 (526)
T TIGR01663 258 ---------------AGFYRKPL---------T-----GMWDHLKEEANDGTEIQEDDCFFVGDAA-GRPANGK 301 (526)
T ss_pred ---------------CCCCCCCC---------H-----HHHHHHHHhcCcccCCCHHHeEEeCCcc-cchHHHH
Confidence 11222333 3 45666888774 7889999999994 5564433
No 96
>PRK08238 hypothetical protein; Validated
Probab=97.56 E-value=0.00023 Score=77.49 Aligned_cols=94 Identities=23% Similarity=0.226 Sum_probs=68.3
Q ss_pred chhHHHHHHHHHHcCCeEEEEeCCChHHHHHhhhhhhccCCCCCCCcCCCccEEEEcCCCCCCCCCCCCccccccCcCcc
Q 011157 220 NGQVLQFVKMLREKGKKLFLLTNSPYYFVDGGMRFMLEDSTGYTDSWRELFDVVIAQANKPDFYTSDHPFRCYDTEKDTL 299 (492)
Q Consensus 220 ~p~l~~~L~~Lk~~GkklfL~TNS~~~y~~~vm~~l~~~~~~~g~~w~~yFD~iI~~a~KP~FF~~~~pfr~vd~~~gk~ 299 (492)
.|++.++|+++|++|.+++|+|||+..+++.+++++ ++ ||.|++... ....++
T Consensus 74 ~pga~e~L~~lk~~G~~v~LaTas~~~~a~~i~~~l---------Gl---Fd~Vigsd~---------------~~~~kg 126 (479)
T PRK08238 74 NEEVLDYLRAERAAGRKLVLATASDERLAQAVAAHL---------GL---FDGVFASDG---------------TTNLKG 126 (479)
T ss_pred ChhHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHc---------CC---CCEEEeCCC---------------ccccCC
Confidence 478999999999999999999999999999999985 43 999988762 111121
Q ss_pred ccccccccCCCeeeccCCHHHHHHHhCCCCCcEEEEcccccccccccccCCcEEEEEecc
Q 011157 300 AFTKVDAFIPNKIYYHGCLKSFLQITKWNGPEVIYFGDHLFSDLRGPSKAGWRTAAIIHE 359 (492)
Q Consensus 300 ~~~~~~~l~~~~vY~~G~~~~~~~~lg~~~~~vLyvGDhi~gDI~~ak~~GwrT~~VvpE 359 (492)
+ +-...+.+.++ .+++.|+||+.. |+-..+.+| +.++|-|.
T Consensus 127 ~---------------~K~~~l~~~l~--~~~~~yvGDS~~-Dlp~~~~A~-~av~Vn~~ 167 (479)
T PRK08238 127 A---------------AKAAALVEAFG--ERGFDYAGNSAA-DLPVWAAAR-RAIVVGAS 167 (479)
T ss_pred c---------------hHHHHHHHHhC--ccCeeEecCCHH-HHHHHHhCC-CeEEECCC
Confidence 1 11223444443 345899999984 587677777 77777654
No 97
>TIGR01488 HAD-SF-IB Haloacid Dehalogenase superfamily, subfamily IB, phosphoserine phosphatase-like. Subfamily IA includes the enzyme phosphoserine phosphatase (TIGR00338) as well as three hypothetical equivalogs. Many members of these hypothetical equivalogs have been annotated as PSPase-like or PSPase-family proteins. In particular, the hypothetical equivalog which appears to be most closely related to PSPase contains only Archaea (while TIGR00338 contains only eukaryotes and bacteria) of which some are annotated as PSPases. Although this is a reasonable conjecture, none of these sequences has sufficient evidence for this assignment. If such should be found, this model should be retired while the PSPase model should be broadened to include these sequences.
Probab=97.54 E-value=0.0001 Score=67.97 Aligned_cols=100 Identities=16% Similarity=0.230 Sum_probs=62.5
Q ss_pred cchhHHHHHHHHHHcCCeEEEEeCCChHHHHHhhhhhhccCCCCCCCcCCCccEEEEcCCCCCCCCCCCCccccccCcCc
Q 011157 219 KNGQVLQFVKMLREKGKKLFLLTNSPYYFVDGGMRFMLEDSTGYTDSWRELFDVVIAQANKPDFYTSDHPFRCYDTEKDT 298 (492)
Q Consensus 219 k~p~l~~~L~~Lk~~GkklfL~TNS~~~y~~~vm~~l~~~~~~~g~~w~~yFD~iI~~a~KP~FF~~~~pfr~vd~~~gk 298 (492)
..|++.++|+.+++.|.+++|+|+|...++..++..+ ++..+|...+.... -..+ +|+
T Consensus 74 ~~~g~~~~l~~l~~~g~~~~ivS~~~~~~i~~~~~~~---------g~~~~~~~~~~~~~-~g~~------------~g~ 131 (177)
T TIGR01488 74 LRPGARELISWLKERGIDTVIVSGGFDFFVEPVAEKL---------GIDDVFANRLEFDD-NGLL------------TGP 131 (177)
T ss_pred cCcCHHHHHHHHHHCCCEEEEECCCcHHHHHHHHHHc---------CCchheeeeEEECC-CCEE------------eCc
Confidence 4689999999999999999999999999999999874 44455544332210 0000 010
Q ss_pred ccc-ccccccCCCeeeccCCHHHHHHHhCCCCCcEEEEccccccccccc
Q 011157 299 LAF-TKVDAFIPNKIYYHGCLKSFLQITKWNGPEVIYFGDHLFSDLRGP 346 (492)
Q Consensus 299 ~~~-~~~~~l~~~~vY~~G~~~~~~~~lg~~~~~vLyvGDhi~gDI~~a 346 (492)
... .......|+. .+.++++..|+++++|+||||+. +|+..+
T Consensus 132 ~~~~~~~~~~~K~~-----~l~~~~~~~~~~~~~~~~iGDs~-~D~~~~ 174 (177)
T TIGR01488 132 IEGQVNPEGECKGK-----VLKELLEESKITLKKIIAVGDSV-NDLPML 174 (177)
T ss_pred cCCcccCCcchHHH-----HHHHHHHHhCCCHHHEEEEeCCH-HHHHHH
Confidence 000 0000000011 13446677788899999999987 456443
No 98
>PRK10530 pyridoxal phosphate (PLP) phosphatase; Provisional
Probab=97.48 E-value=0.00059 Score=67.51 Aligned_cols=37 Identities=27% Similarity=0.556 Sum_probs=29.9
Q ss_pred HHHHHHHhCCCCCcEEEEcccccccccccccCCcEEEEE
Q 011157 318 LKSFLQITKWNGPEVIYFGDHLFSDLRGPSKAGWRTAAI 356 (492)
Q Consensus 318 ~~~~~~~lg~~~~~vLyvGDhi~gDI~~ak~~GwrT~~V 356 (492)
+..+++.+|+++++|++|||+. .|+-..+.+|+ .+++
T Consensus 204 l~~l~~~~gi~~~e~i~~GD~~-NDi~m~~~ag~-~vam 240 (272)
T PRK10530 204 LTQWVEAQGWSMKNVVAFGDNF-NDISMLEAAGL-GVAM 240 (272)
T ss_pred HHHHHHHcCCCHHHeEEeCCCh-hhHHHHHhcCc-eEEe
Confidence 5668999999999999999997 55877777886 4444
No 99
>TIGR01544 HAD-SF-IE haloacid dehalogenase superfamily, subfamily IE hydrolase, TIGR01544. This group of sequences was found during searches for members of the haloacid dehalogenase (HAD) superfamily. All of the conserved catalytic motifs are found. The placement of the variable domain between motifs 1 and 2 indicates membership in subfamily I of the superfamily, but these sequences are sufficiently different from any of the branches (IA, TIGR01493, TIGR01509, TIGR01549; IB, TIGR01488; IC, TIGR01494; ID, TIGR01658; IF TIGR01545) of that subfamily as to constitute a separate branch to now be called IE. Considering that the closest identifiable hit outside of the noise range is to a phosphoserine phosphatase, this group may be considered to be most closely allied to subfamily IB.
Probab=97.30 E-value=0.00053 Score=69.66 Aligned_cols=113 Identities=12% Similarity=0.052 Sum_probs=73.2
Q ss_pred hccchhHHHHHHHHHHcCCeEEEEeCCChHHHHHhhhhhhccCCCCCCCcCCCccEEEEcCCCCCCCCCCCCccccccCc
Q 011157 217 LVKNGQVLQFVKMLREKGKKLFLLTNSPYYFVDGGMRFMLEDSTGYTDSWRELFDVVIAQANKPDFYTSDHPFRCYDTEK 296 (492)
Q Consensus 217 i~k~p~l~~~L~~Lk~~GkklfL~TNS~~~y~~~vm~~l~~~~~~~g~~w~~yFD~iI~~a~KP~FF~~~~pfr~vd~~~ 296 (492)
+...|++.++|+.|++.|.+++++|++...+++.+++.+ +|.+.|..|+++-- -|.+. ++-+
T Consensus 120 l~l~pG~~efl~~L~~~GIpv~IvS~G~~~~Ie~vL~~l---------gl~~~~~~IvSN~L---~f~~d------Gvlt 181 (277)
T TIGR01544 120 VMLKDGYENFFDKLQQHSIPVFIFSAGIGNVLEEVLRQA---------GVYHPNVKVVSNFM---DFDED------GVLK 181 (277)
T ss_pred CccCcCHHHHHHHHHHCCCcEEEEeCCcHHHHHHHHHHc---------CCCCcCceEEeeeE---EECCC------CeEe
Confidence 556899999999999999999999999999999999974 67667766655441 01000 1112
Q ss_pred CccccccccccCCCeeeccCCHH----HHHHHhC--CCCCcEEEEcccccccccccccC-CcEEEEEe
Q 011157 297 DTLAFTKVDAFIPNKIYYHGCLK----SFLQITK--WNGPEVIYFGDHLFSDLRGPSKA-GWRTAAII 357 (492)
Q Consensus 297 gk~~~~~~~~l~~~~vY~~G~~~----~~~~~lg--~~~~~vLyvGDhi~gDI~~ak~~-GwrT~~Vv 357 (492)
|++. |-|-..+--. .+++.++ ..+++|++|||+..+ +..|.-. ...+++=|
T Consensus 182 G~~~---------P~i~~~~K~~~v~~~~~~~~~~~~~~~~vI~vGDs~~D-l~ma~g~~~~~~~l~i 239 (277)
T TIGR01544 182 GFKG---------PLIHTFNKNHDVALRNTEYFNQLKDRSNIILLGDSQGD-LRMADGVANVEHILKI 239 (277)
T ss_pred CCCC---------CcccccccHHHHHHHHHHHhCccCCcceEEEECcChhh-hhHhcCCCcccceEEE
Confidence 2211 2121222211 2556677 788999999999985 8655432 33444443
No 100
>TIGR01459 HAD-SF-IIA-hyp4 HAD-superfamily class IIA hydrolase, TIGR01459. This hypothetical equivalog is a member of the Class IIA subfamily of the haloacid dehalogenase superfamily of aspartate-nucleophile hydrolases. The sequences modelled by this equivalog are all gram negative and primarily alpha proteobacteria. Only one sequence hase been annotated as other than "hypothetical." That one, from Brucella, is annotated as related to NagD, but only by sequence similarity and should be treated with some skepticism. (See comments for Class IIA subfamily)
Probab=97.30 E-value=0.00037 Score=68.70 Aligned_cols=79 Identities=11% Similarity=0.134 Sum_probs=58.9
Q ss_pred cchhHHHHHHHHHHcCCeEEEEeCCChHHHH--HhhhhhhccCCCCCCCcCC-CccEEEEcCCCCCCCCCCCCccccccC
Q 011157 219 KNGQVLQFVKMLREKGKKLFLLTNSPYYFVD--GGMRFMLEDSTGYTDSWRE-LFDVVIAQANKPDFYTSDHPFRCYDTE 295 (492)
Q Consensus 219 k~p~l~~~L~~Lk~~GkklfL~TNS~~~y~~--~vm~~l~~~~~~~g~~w~~-yFD~iI~~a~KP~FF~~~~pfr~vd~~ 295 (492)
.-|+..++|++|+++|++++++||++..... ..++. .++.. +||.|++++. ..
T Consensus 25 ~~pga~e~L~~L~~~G~~~~ivTN~~~~~~~~~~~L~~---------~gl~~~~~~~Ii~s~~---------------~~ 80 (242)
T TIGR01459 25 TYPGAVQNLNKIIAQGKPVYFVSNSPRNIFSLHKTLKS---------LGINADLPEMIISSGE---------------IA 80 (242)
T ss_pred cCccHHHHHHHHHHCCCEEEEEeCCCCChHHHHHHHHH---------CCCCccccceEEccHH---------------HH
Confidence 4689999999999999999999999987765 44554 36666 8999998871 10
Q ss_pred cCccccccccccCCCeeeccCCHHHHHHHhCCCCCcEEEEccccc
Q 011157 296 KDTLAFTKVDAFIPNKIYYHGCLKSFLQITKWNGPEVIYFGDHLF 340 (492)
Q Consensus 296 ~gk~~~~~~~~l~~~~vY~~G~~~~~~~~lg~~~~~vLyvGDhi~ 340 (492)
. ..+..+++.+|+.+++|++|||...
T Consensus 81 ~-------------------~~l~~~~~~~~~~~~~~~~vGd~~~ 106 (242)
T TIGR01459 81 V-------------------QMILESKKRFDIRNGIIYLLGHLEN 106 (242)
T ss_pred H-------------------HHHHhhhhhccCCCceEEEeCCccc
Confidence 0 1122344566788899999999764
No 101
>TIGR01460 HAD-SF-IIA Haloacid Dehalogenase Superfamily Class (subfamily) IIA. Many of the genes in this subfamily have been annotated as "pNPPase" "4-nitrophenyl phosphatase" or "NPPase". These all refer to the same activity versus a common lab test compound used to determine phosphatase activity. There is no evidence that this activity is physiologically relevant.
Probab=97.27 E-value=6.3e-05 Score=74.15 Aligned_cols=43 Identities=26% Similarity=0.431 Sum_probs=38.1
Q ss_pred CeeeccCCHHHHHHHhCCCCCcE-EEEcccccccccccccCCcEEEEEe
Q 011157 310 NKIYYHGCLKSFLQITKWNGPEV-IYFGDHLFSDLRGPSKAGWRTAAII 357 (492)
Q Consensus 310 ~~vY~~G~~~~~~~~lg~~~~~v-LyvGDhi~gDI~~ak~~GwrT~~Vv 357 (492)
+.+|.. +++.++.+++++ +||||++..||.+|+++||+|++|.
T Consensus 191 ~~~~~~-----~~~~~~~~~~~~~~~IGD~~~~Di~~A~~~G~~~i~v~ 234 (236)
T TIGR01460 191 PAIYRA-----ALNLLQARPERRDVMVGDNLRTDILGAKNAGFDTLLVL 234 (236)
T ss_pred HHHHHH-----HHHHhCCCCccceEEECCCcHHHHHHHHHCCCcEEEEe
Confidence 556655 999999988887 9999999999999999999999984
No 102
>TIGR01684 viral_ppase viral phosphatase. These proteins also include an N-terminal domain (ca. 125 aas) that is unique to this clade.
Probab=97.04 E-value=0.0015 Score=66.76 Aligned_cols=66 Identities=17% Similarity=0.271 Sum_probs=55.2
Q ss_pred hhhhhHHHHhcCccchh-ccchhHHHHHHHHHHcCCeEEEEeCCChHHHHHhhhhhhccCCCCCCCcCCCccEEEEcCCC
Q 011157 201 RRGLVHRGILSDPNRYL-VKNGQVLQFVKMLREKGKKLFLLTNSPYYFVDGGMRFMLEDSTGYTDSWRELFDVVIAQANK 279 (492)
Q Consensus 201 ~~G~lk~~v~~np~kYi-~k~p~l~~~L~~Lk~~GkklfL~TNS~~~y~~~vm~~l~~~~~~~g~~w~~yFD~iI~~a~K 279 (492)
.||+|- +.++=+ .++|++.++|++|+++|.+++|+||++.+.+..+|+.+ ++.+|||+|+++...
T Consensus 133 LDgTLi-----~~~~~v~irdPgV~EaL~~LkekGikLaIaTS~~Re~v~~~L~~l---------GLd~YFdvIIs~Gdv 198 (301)
T TIGR01684 133 LDSTLI-----TDEEPVRIRDPRIYDSLTELKKRGCILVLWSYGDRDHVVESMRKV---------KLDRYFDIIISGGHK 198 (301)
T ss_pred cCCCCc-----CCCCccccCCHHHHHHHHHHHHCCCEEEEEECCCHHHHHHHHHHc---------CCCcccCEEEECCcc
Confidence 467664 335545 55799999999999999999999999999999999984 788999999998864
Q ss_pred C
Q 011157 280 P 280 (492)
Q Consensus 280 P 280 (492)
.
T Consensus 199 ~ 199 (301)
T TIGR01684 199 A 199 (301)
T ss_pred c
Confidence 3
No 103
>KOG3040 consensus Predicted sugar phosphatase (HAD superfamily) [General function prediction only]
Probab=96.78 E-value=0.0024 Score=62.11 Aligned_cols=148 Identities=22% Similarity=0.264 Sum_probs=89.7
Q ss_pred hhhhhHHHHhcCccchhccchhHHHHHHHHHHcCCeEEEEeCCChHHHHHhhhhhh-----------------------c
Q 011157 201 RRGLVHRGILSDPNRYLVKNGQVLQFVKMLREKGKKLFLLTNSPYYFVDGGMRFML-----------------------E 257 (492)
Q Consensus 201 ~~G~lk~~v~~np~kYi~k~p~l~~~L~~Lk~~GkklfL~TNS~~~y~~~vm~~l~-----------------------~ 257 (492)
.+|.++-+.. .-|+..+.|++||.++.|+=.+||..-+--..+...|. .
T Consensus 14 lSGtLh~e~~--------avpga~eAl~rLr~~~~kVkFvTNttk~Sk~~l~~rL~rlgf~v~eeei~tsl~aa~~~~~~ 85 (262)
T KOG3040|consen 14 LSGTLHIEDA--------AVPGAVEALKRLRDQHVKVKFVTNTTKESKRNLHERLQRLGFDVSEEEIFTSLPAARQYLEE 85 (262)
T ss_pred ccceEecccc--------cCCCHHHHHHHHHhcCceEEEEecCcchhHHHHHHHHHHhCCCccHHHhcCccHHHHHHHHh
Confidence 3555554443 56899999999999999999999975432222222221 1
Q ss_pred cCCCC----CCCcCCCccEEEEc-------CCCCCCCCCC---CCccccccCcCcccc---------ccccc-------c
Q 011157 258 DSTGY----TDSWRELFDVVIAQ-------ANKPDFYTSD---HPFRCYDTEKDTLAF---------TKVDA-------F 307 (492)
Q Consensus 258 ~~~~~----g~~w~~yFD~iI~~-------a~KP~FF~~~---~pfr~vd~~~gk~~~---------~~~~~-------l 307 (492)
..+-+ ..+-+++||-|=|+ +--|.-|+.. +.||.+-. ..|+.. ..+.. +
T Consensus 86 ~~lrP~l~v~d~a~~dF~gidTs~pn~VViglape~F~y~~ln~AFrvL~e-~~k~~LIai~kgryykr~~Gl~lgpG~f 164 (262)
T KOG3040|consen 86 NQLRPYLIVDDDALEDFDGIDTSDPNCVVIGLAPEGFSYQRLNRAFRVLLE-MKKPLLIAIGKGRYYKRVDGLCLGPGPF 164 (262)
T ss_pred cCCCceEEEcccchhhCCCccCCCCCeEEEecCcccccHHHHHHHHHHHHc-CCCCeEEEecCceeeeeccccccCchHH
Confidence 11111 34566677643222 2236667643 45655321 111110 01111 1
Q ss_pred CCCeeeccCC------------HHHHHHHhCCCCCcEEEEcccccccccccccCCcEEEEEe
Q 011157 308 IPNKIYYHGC------------LKSFLQITKWNGPEVIYFGDHLFSDLRGPSKAGWRTAAII 357 (492)
Q Consensus 308 ~~~~vY~~G~------------~~~~~~~lg~~~~~vLyvGDhi~gDI~~ak~~GwrT~~Vv 357 (492)
-++--|+.|. ++++++-+|++++++++|||.+.+||.+|.+.|||.++|.
T Consensus 165 v~aLeyatg~~a~vvGKP~~~fFe~al~~~gv~p~~aVMIGDD~~dDvgGAq~~GMrgilVk 226 (262)
T KOG3040|consen 165 VAALEYATGCEATVVGKPSPFFFESALQALGVDPEEAVMIGDDLNDDVGGAQACGMRGILVK 226 (262)
T ss_pred HHHhhhccCceEEEecCCCHHHHHHHHHhcCCChHHheEEccccccchhhHhhhcceeEEee
Confidence 1111222232 5778999999999999999999999999999999999995
No 104
>TIGR02137 HSK-PSP phosphoserine phosphatase/homoserine phosphotransferase bifunctional protein. This enzyme is a member of the haloacid dehalogenase (HAD) superfamily, specifically part of subfamily IB by virtue of the presence of an alpha helical domain in between motifs I and II of the HAD domain . The closest homologs to this family are monofunctional phosphoserine phosphatases (TIGR00338).
Probab=96.74 E-value=0.0049 Score=59.69 Aligned_cols=109 Identities=19% Similarity=0.066 Sum_probs=69.6
Q ss_pred hccchhHHHHHHHHHHcCCeEEEEeCCChHHHHHhhhhhhccCCCCCCCcCCCcc--EEEEcCCCCCCCCCCCCcccccc
Q 011157 217 LVKNGQVLQFVKMLREKGKKLFLLTNSPYYFVDGGMRFMLEDSTGYTDSWRELFD--VVIAQANKPDFYTSDHPFRCYDT 294 (492)
Q Consensus 217 i~k~p~l~~~L~~Lk~~GkklfL~TNS~~~y~~~vm~~l~~~~~~~g~~w~~yFD--~iI~~a~KP~FF~~~~pfr~vd~ 294 (492)
+...|++.++|+.+|+.| +++|+||+...++..+++.+ +...+|. +.+.+.. .+
T Consensus 67 i~l~pga~ell~~lk~~~-~~~IVS~~~~~~~~~il~~l---------gi~~~~an~l~~~~~g---~~----------- 122 (203)
T TIGR02137 67 LKPLEGAVEFVDWLRERF-QVVILSDTFYEFSQPLMRQL---------GFPTLLCHKLEIDDSD---RV----------- 122 (203)
T ss_pred CCCCccHHHHHHHHHhCC-eEEEEeCChHHHHHHHHHHc---------CCchhhceeeEEecCC---ee-----------
Confidence 345799999999999986 89999999999999999985 4445665 2322211 01
Q ss_pred CcCccccccccccCCCeeeccCCHHHHHHHhCCCCCcEEEEcccccccccccccCCcEEEEEeccchhH
Q 011157 295 EKDTLAFTKVDAFIPNKIYYHGCLKSFLQITKWNGPEVIYFGDHLFSDLRGPSKAGWRTAAIIHELESE 363 (492)
Q Consensus 295 ~~gk~~~~~~~~l~~~~vY~~G~~~~~~~~lg~~~~~vLyvGDhi~gDI~~ak~~GwrT~~VvpEl~~E 363 (492)
+|... .+..| =...++.+...+.+|++|||+... +..++.+|...+..-.+...+
T Consensus 123 -tG~~~-----------~~~~~-K~~~l~~l~~~~~~~v~vGDs~nD-l~ml~~Ag~~ia~~ak~~~~~ 177 (203)
T TIGR02137 123 -VGYQL-----------RQKDP-KRQSVIAFKSLYYRVIAAGDSYND-TTMLSEAHAGILFHAPENVIR 177 (203)
T ss_pred -ECeee-----------cCcch-HHHHHHHHHhhCCCEEEEeCCHHH-HHHHHhCCCCEEecCCHHHHH
Confidence 11000 00001 111233333345689999999876 866777888887775555443
No 105
>KOG2882 consensus p-Nitrophenyl phosphatase [Inorganic ion transport and metabolism]
Probab=96.74 E-value=0.0031 Score=64.33 Aligned_cols=109 Identities=16% Similarity=0.161 Sum_probs=71.8
Q ss_pred hhHHHHHHHHHHcCCeEEEEeCCChHHHHHhhhhhhccCCCCCCCcCCCccE----EEEcCCCCCCCCCCCCccccccCc
Q 011157 221 GQVLQFVKMLREKGKKLFLLTNSPYYFVDGGMRFMLEDSTGYTDSWRELFDV----VIAQANKPDFYTSDHPFRCYDTEK 296 (492)
Q Consensus 221 p~l~~~L~~Lk~~GkklfL~TNS~~~y~~~vm~~l~~~~~~~g~~w~~yFD~----iI~~a~KP~FF~~~~pfr~vd~~~ 296 (492)
++|...+..|++-|- +||+||.+.-.- +. +|..|-.-..+ ..+..|+|.++
T Consensus 168 ~KL~kA~~yLqnP~c-lflatn~D~~~p------~~-----~~~~ipG~G~~v~av~~~t~R~P~v~------------- 222 (306)
T KOG2882|consen 168 PKLMKALNYLQNPGC-LFLATNRDATTP------PT-----PGVEIPGAGSFVAAVKFATGRQPIVL------------- 222 (306)
T ss_pred HHHHHHHHHhCCCCc-EEEeccCccccC------CC-----CCeeccCCccHHHHHHHHhcCCCeec-------------
Confidence 466777888886664 999999876322 00 12222222221 22344555444
Q ss_pred CccccccccccCCCeeeccCCHHHHHHHhCCCCCcEEEEcccccccccccccCCcEEEEEeccchhHHHHhh
Q 011157 297 DTLAFTKVDAFIPNKIYYHGCLKSFLQITKWNGPEVIYFGDHLFSDLRGPSKAGWRTAAIIHELESEIRIQN 368 (492)
Q Consensus 297 gk~~~~~~~~l~~~~vY~~G~~~~~~~~lg~~~~~vLyvGDhi~gDI~~ak~~GwrT~~VvpEl~~Ei~~~~ 368 (492)
|||. +.+. +-+.+..+..++++++|||.+-+||.=++..|+.|.+|.-....|-++.+
T Consensus 223 GKP~---------~~m~-----~~l~~~~~i~psRt~mvGDRL~TDIlFG~~~G~~TLLvltGv~~led~~~ 280 (306)
T KOG2882|consen 223 GKPS---------TFMF-----EYLLEKFNIDPSRTCMVGDRLDTDILFGKNCGFKTLLVLSGVTTLEDILE 280 (306)
T ss_pred CCCC---------HHHH-----HHHHHHcCCCcceEEEEcccchhhhhHhhccCcceEEEecCcCcHHHHHh
Confidence 3333 2222 33778889999999999999999999999999999999887766544443
No 106
>TIGR01456 CECR5 HAD-superfamily class IIA hydrolase, TIGR01456, CECR5. The Schizosaccharomyces pombe sequence (EGAD|138276) is annotated as "phosphatidyl synthase," however this is due entirely to a C-terminal region of the protein (outside the region of similarity of this model) which is highly homologous to a family of CDP-alcohol phosphatidyltransferases. (Thus, the annotation of GP|4226073 from C. elegans as similar to phosphatidyl synthase, is a mistake as this gene does not contain the C-terminal portion). The physical connection of the phosphatidyl synthase and the HAD-superfamily hydrolase domain in S. pombe may, however, be an important clue to the substrate for the hydrolases in this equivalog.
Probab=96.70 E-value=0.00085 Score=69.26 Aligned_cols=31 Identities=23% Similarity=0.366 Sum_probs=28.4
Q ss_pred CCcEEEEcccccccccccccCCcEEEEEecc
Q 011157 329 GPEVIYFGDHLFSDLRGPSKAGWRTAAIIHE 359 (492)
Q Consensus 329 ~~~vLyvGDhi~gDI~~ak~~GwrT~~VvpE 359 (492)
+++|++|||++.+||..|+++||.|++|...
T Consensus 263 ~~~~~mIGD~~~tDI~ga~~~G~~silV~tG 293 (321)
T TIGR01456 263 FHALYMVGDNPASDIIGAQNYGWFSCLVKTG 293 (321)
T ss_pred hheEEEEcCChhhhhhhHHhCCceEEEeccc
Confidence 4699999999999999999999999999653
No 107
>TIGR02250 FCP1_euk FCP1-like phosphatase, phosphatase domain. This domain is related to domains found in the human NLI interacting factor-like phosphatases, and together both are detected by the Pfam model pfam03031.
Probab=96.70 E-value=0.0059 Score=56.86 Aligned_cols=87 Identities=13% Similarity=0.127 Sum_probs=65.5
Q ss_pred CccchhccchhHHHHHHHHHHcCCeEEEEeCCChHHHHHhhhhhhccCCCCCCCcCCCc-cEEEEcCCCCCCCCCCCCcc
Q 011157 212 DPNRYLVKNGQVLQFVKMLREKGKKLFLLTNSPYYFVDGGMRFMLEDSTGYTDSWRELF-DVVIAQANKPDFYTSDHPFR 290 (492)
Q Consensus 212 np~kYi~k~p~l~~~L~~Lk~~GkklfL~TNS~~~y~~~vm~~l~~~~~~~g~~w~~yF-D~iI~~a~KP~FF~~~~pfr 290 (492)
+...|+.+-|++.++|++|++. +++++.||++..|++.+++.+ +.. ..+| +.|++..
T Consensus 52 ~~~~~v~~rPgv~efL~~l~~~-yel~I~T~~~~~yA~~vl~~l-------dp~-~~~F~~ri~~rd------------- 109 (156)
T TIGR02250 52 TMWYLTKLRPFLHEFLKEASKL-YEMHVYTMGTRAYAQAIAKLI-------DPD-GKYFGDRIISRD------------- 109 (156)
T ss_pred CeEEEEEECCCHHHHHHHHHhh-cEEEEEeCCcHHHHHHHHHHh-------CcC-CCeeccEEEEec-------------
Confidence 5677888999999999999855 999999999999999999986 222 3588 7777654
Q ss_pred ccccCcCccccccccccCCCeeeccCCHHHHHHHhCCCCCcEEEEcccccc
Q 011157 291 CYDTEKDTLAFTKVDAFIPNKIYYHGCLKSFLQITKWNGPEVIYFGDHLFS 341 (492)
Q Consensus 291 ~vd~~~gk~~~~~~~~l~~~~vY~~G~~~~~~~~lg~~~~~vLyvGDhi~g 341 (492)
++. ++..+.+-.++|...+.|+.|.|+...
T Consensus 110 --~~~-------------------~~~~KdL~~i~~~d~~~vvivDd~~~~ 139 (156)
T TIGR02250 110 --ESG-------------------SPHTKSLLRLFPADESMVVIIDDREDV 139 (156)
T ss_pred --cCC-------------------CCccccHHHHcCCCcccEEEEeCCHHH
Confidence 111 112233445677788899999998754
No 108
>TIGR01525 ATPase-IB_hvy heavy metal translocating P-type ATPase. This alignment encompasses two equivalog models for the copper and cadmium-type heavy metal transporting P-type ATPases (TIGR01511 and TIGR01512) as well as those species which score ambiguously between both models. For more comments and references, see the files on TIGR01511 and 01512.
Probab=96.70 E-value=0.0022 Score=71.09 Aligned_cols=82 Identities=20% Similarity=0.203 Sum_probs=62.9
Q ss_pred cchhHHHHHHHHHHcC-CeEEEEeCCChHHHHHhhhhhhccCCCCCCCcCCCccEEEEcCCCCCCCCCCCCccccccCcC
Q 011157 219 KNGQVLQFVKMLREKG-KKLFLLTNSPYYFVDGGMRFMLEDSTGYTDSWRELFDVVIAQANKPDFYTSDHPFRCYDTEKD 297 (492)
Q Consensus 219 k~p~l~~~L~~Lk~~G-kklfL~TNS~~~y~~~vm~~l~~~~~~~g~~w~~yFD~iI~~a~KP~FF~~~~pfr~vd~~~g 297 (492)
..|++.++|++|++.| ++++++||.+...+..+++.+ ++.++|+-+ .| - +
T Consensus 385 ~~~g~~e~l~~L~~~g~i~v~ivTgd~~~~a~~i~~~l---------gi~~~f~~~-----~p--------~-------~ 435 (556)
T TIGR01525 385 LRPEAKEAIAALKRAGGIKLVMLTGDNRSAAEAVAAEL---------GIDEVHAEL-----LP--------E-------D 435 (556)
T ss_pred chHhHHHHHHHHHHcCCCeEEEEeCCCHHHHHHHHHHh---------CCCeeeccC-----CH--------H-------H
Confidence 3579999999999999 999999999999999999985 555555432 11 0 1
Q ss_pred ccccccccccCCCeeeccCCHHHHHHHhCCCCCcEEEEcccccccccccccCC
Q 011157 298 TLAFTKVDAFIPNKIYYHGCLKSFLQITKWNGPEVIYFGDHLFSDLRGPSKAG 350 (492)
Q Consensus 298 k~~~~~~~~l~~~~vY~~G~~~~~~~~lg~~~~~vLyvGDhi~gDI~~ak~~G 350 (492)
|+ .+.+.++..+++|+||||.+. |+.+++++|
T Consensus 436 K~--------------------~~v~~l~~~~~~v~~vGDg~n-D~~al~~A~ 467 (556)
T TIGR01525 436 KL--------------------AIVKELQEEGGVVAMVGDGIN-DAPALAAAD 467 (556)
T ss_pred HH--------------------HHHHHHHHcCCEEEEEECChh-HHHHHhhCC
Confidence 11 255555557889999999985 688888888
No 109
>PF12689 Acid_PPase: Acid Phosphatase; InterPro: IPR010036 This entry represents two closely related clades of sequences from eukaryotes and archaea. The mouse enzyme has been characterised as a phosphatase and has been positively identified as a member of the haloacid dehalogenase (HAD) superfamily by site-directed mutagenesis of the active site residues [, ].; GO: 0016791 phosphatase activity; PDB: 1U7P_A 1U7O_A 2WM8_A.
Probab=96.68 E-value=0.0086 Score=56.67 Aligned_cols=106 Identities=20% Similarity=0.244 Sum_probs=61.5
Q ss_pred chhHHHHHHHHHHcCCeEEEEe-CCChHHHHHhhhhhh-ccCCCCCCCcCCCccEEEEcCCCCCCCCCCCCccccccCcC
Q 011157 220 NGQVLQFVKMLREKGKKLFLLT-NSPYYFVDGGMRFML-EDSTGYTDSWRELFDVVIAQANKPDFYTSDHPFRCYDTEKD 297 (492)
Q Consensus 220 ~p~l~~~L~~Lk~~GkklfL~T-NS~~~y~~~vm~~l~-~~~~~~g~~w~~yFD~iI~~a~KP~FF~~~~pfr~vd~~~g 297 (492)
-|+++..|+.|++.|.+++++| ++..+.+..+|+-+- ...-..+..+.++||.
T Consensus 47 ypdv~~iL~~L~~~gv~lavASRt~~P~~A~~~L~~l~i~~~~~~~~~~~~~F~~------------------------- 101 (169)
T PF12689_consen 47 YPDVPEILQELKERGVKLAVASRTDEPDWARELLKLLEIDDADGDGVPLIEYFDY------------------------- 101 (169)
T ss_dssp -TTHHHHHHHHHHCT--EEEEE--S-HHHHHHHHHHTT-C----------CCECE-------------------------
T ss_pred CcCHHHHHHHHHHCCCEEEEEECCCChHHHHHHHHhcCCCccccccccchhhcch-------------------------
Confidence 4677777888899999999999 566789999998641 0000112233344444
Q ss_pred ccccccccccCCCeeecc---CCHHHHHHHhCCCCCcEEEEcccccccccccccCCcEEEEEeccchhH
Q 011157 298 TLAFTKVDAFIPNKIYYH---GCLKSFLQITKWNGPEVIYFGDHLFSDLRGPSKAGWRTAAIIHELESE 363 (492)
Q Consensus 298 k~~~~~~~~l~~~~vY~~---G~~~~~~~~lg~~~~~vLyvGDhi~gDI~~ak~~GwrT~~VvpEl~~E 363 (492)
.+||.+ .+++.+.+.+|++.+++|+|.|.-.. +...++.|..+++|...+..+
T Consensus 102 ------------~eI~~gsK~~Hf~~i~~~tgI~y~eMlFFDDe~~N-~~~v~~lGV~~v~v~~Glt~~ 157 (169)
T PF12689_consen 102 ------------LEIYPGSKTTHFRRIHRKTGIPYEEMLFFDDESRN-IEVVSKLGVTCVLVPDGLTWD 157 (169)
T ss_dssp ------------EEESSS-HHHHHHHHHHHH---GGGEEEEES-HHH-HHHHHTTT-EEEE-SSS--HH
T ss_pred ------------hheecCchHHHHHHHHHhcCCChhHEEEecCchhc-ceeeEecCcEEEEeCCCCCHH
Confidence 233332 12667888999999999999999998 555566999999997766554
No 110
>PF06888 Put_Phosphatase: Putative Phosphatase; InterPro: IPR016965 This group represents phosphatases related to PHOSPHO1 and PHOSPHO2 []. It includes plant phosphatases with homology to the haloacid dehalogenase (HAD) superfamily [, ]. PHOSPHO1 is a phosphoethanolamine/phosphocholine phosphatase [], while PHOSPHO2 has high activity toward pyridoxal 5'-phosphate (PLP), and it is active at much lower level toward pyrophosphate, phosphoethanolamine (PEA)and phosphocholine (PCho) []. ; GO: 0016791 phosphatase activity
Probab=96.63 E-value=0.011 Score=58.67 Aligned_cols=111 Identities=16% Similarity=0.336 Sum_probs=72.5
Q ss_pred hccchhHHHHHHHH--HHcCCeEEEEeCCChHHHHHhhhhhhccCCCCCCCcCCCccEEEEcCCCCCCCCCCCCcccccc
Q 011157 217 LVKNGQVLQFVKML--REKGKKLFLLTNSPYYFVDGGMRFMLEDSTGYTDSWRELFDVVIAQANKPDFYTSDHPFRCYDT 294 (492)
Q Consensus 217 i~k~p~l~~~L~~L--k~~GkklfL~TNS~~~y~~~vm~~l~~~~~~~g~~w~~yFD~iI~~a~KP~FF~~~~pfr~vd~ 294 (492)
|..+|+++++++.+ ++.|..+.++|.|+.-|++.+|+. .+.++.|+-|+++. ..|..+
T Consensus 70 ip~~pgm~~~l~~l~~~~~~~~~~IiSDaNs~fI~~iL~~---------~gl~~~f~~I~TNp---a~~~~~-------- 129 (234)
T PF06888_consen 70 IPIDPGMKELLRFLAKNQRGFDLIIISDANSFFIETILEH---------HGLRDCFSEIFTNP---ACFDAD-------- 129 (234)
T ss_pred CCCCccHHHHHHHHHhcCCCceEEEEeCCcHhHHHHHHHh---------CCCccccceEEeCC---ceecCC--------
Confidence 55689999999999 457999999999999999999987 57899999999874 334321
Q ss_pred CcCccccccccc----cCCCeeeccCCHHHHHHHh---CCCCCcEEEEcccccccccccccCC
Q 011157 295 EKDTLAFTKVDA----FIPNKIYYHGCLKSFLQIT---KWNGPEVIYFGDHLFSDLRGPSKAG 350 (492)
Q Consensus 295 ~~gk~~~~~~~~----l~~~~vY~~G~~~~~~~~l---g~~~~~vLyvGDhi~gDI~~ak~~G 350 (492)
|.+...+... .-++..-.+.-++++++.. |..-++|+||||-- +|.-++++.+
T Consensus 130 --G~l~v~pyh~h~C~~C~~NmCK~~il~~~~~~~~~~g~~~~rviYiGDG~-nD~Cp~~~L~ 189 (234)
T PF06888_consen 130 --GRLRVRPYHSHGCSLCPPNMCKGKILERLLQEQAQRGVPYDRVIYIGDGR-NDFCPALRLR 189 (234)
T ss_pred --ceEEEeCccCCCCCcCCCccchHHHHHHHHHHHhhcCCCcceEEEECCCC-CCcCcccccC
Confidence 2222111110 0011111111133454442 55668999999986 4587776644
No 111
>PHA03398 viral phosphatase superfamily protein; Provisional
Probab=96.61 E-value=0.0041 Score=63.68 Aligned_cols=66 Identities=17% Similarity=0.222 Sum_probs=54.2
Q ss_pred hhhhhHHHHhcCccchh-ccchhHHHHHHHHHHcCCeEEEEeCCChHHHHHhhhhhhccCCCCCCCcCCCccEEEEcCCC
Q 011157 201 RRGLVHRGILSDPNRYL-VKNGQVLQFVKMLREKGKKLFLLTNSPYYFVDGGMRFMLEDSTGYTDSWRELFDVVIAQANK 279 (492)
Q Consensus 201 ~~G~lk~~v~~np~kYi-~k~p~l~~~L~~Lk~~GkklfL~TNS~~~y~~~vm~~l~~~~~~~g~~w~~yFD~iI~~a~K 279 (492)
.+|+|-. .++=| .++|++.++|++|+++|.+++|+||.+.+.+...|+.+ ++.+|||+|+++...
T Consensus 135 ~D~TL~~-----~~~~v~irdp~V~EtL~eLkekGikLaIvTNg~Re~v~~~Le~l---------gL~~yFDvII~~g~i 200 (303)
T PHA03398 135 LDSTLIT-----DEEPVRIRDPFVYDSLDELKERGCVLVLWSYGNREHVVHSLKET---------KLEGYFDIIICGGRK 200 (303)
T ss_pred cCCCccC-----CCCccccCChhHHHHHHHHHHCCCEEEEEcCCChHHHHHHHHHc---------CCCccccEEEECCCc
Confidence 4666543 34444 45799999999999999999999999999999999874 778999999998853
Q ss_pred C
Q 011157 280 P 280 (492)
Q Consensus 280 P 280 (492)
.
T Consensus 201 ~ 201 (303)
T PHA03398 201 A 201 (303)
T ss_pred c
Confidence 3
No 112
>COG0241 HisB Histidinol phosphatase and related phosphatases [Amino acid transport and metabolism]
Probab=96.59 E-value=0.0048 Score=59.00 Aligned_cols=110 Identities=18% Similarity=0.209 Sum_probs=78.0
Q ss_pred cchhHHHHHHHHHHcCCeEEEEeCCC------------hHHHHHhhhhhhccCCCCCCCcCCCccEEEEcCCCCCCCCCC
Q 011157 219 KNGQVLQFVKMLREKGKKLFLLTNSP------------YYFVDGGMRFMLEDSTGYTDSWRELFDVVIAQANKPDFYTSD 286 (492)
Q Consensus 219 k~p~l~~~L~~Lk~~GkklfL~TNS~------------~~y~~~vm~~l~~~~~~~g~~w~~yFD~iI~~a~KP~FF~~~ 286 (492)
-.|++.+.|..|++.|.+++++||-+ -.+.+.++..+-. .| --||-|..+.-.|.=.
T Consensus 32 ~~~g~i~al~~l~~~gy~lVvvTNQsGi~rgyf~~~~f~~~~~~m~~~l~~----~g----v~id~i~~Cph~p~~~--- 100 (181)
T COG0241 32 FIPGVIPALLKLQRAGYKLVVVTNQSGIGRGYFTEADFDKLHNKMLKILAS----QG----VKIDGILYCPHHPEDN--- 100 (181)
T ss_pred cCccHHHHHHHHHhCCCeEEEEECCCCccccCccHHHHHHHHHHHHHHHHH----cC----CccceEEECCCCCCCC---
Confidence 35789999999999999999999932 2233334444321 12 2577787777666321
Q ss_pred CCccccccCcCccccccccccCCCeeeccCCHHHHHHHhCCCCCcEEEEcccccccccccccCCcEEEEEeccch
Q 011157 287 HPFRCYDTEKDTLAFTKVDAFIPNKIYYHGCLKSFLQITKWNGPEVIYFGDHLFSDLRGPSKAGWRTAAIIHELE 361 (492)
Q Consensus 287 ~pfr~vd~~~gk~~~~~~~~l~~~~vY~~G~~~~~~~~lg~~~~~vLyvGDhi~gDI~~ak~~GwrT~~VvpEl~ 361 (492)
+..-||. + |=+.++++..+.+.++..+|||.+ +|+.+|.++|.+.+++..+.-
T Consensus 101 -------c~cRKP~---------~-----gm~~~~~~~~~iD~~~s~~VGD~~-~Dlq~a~n~gi~~~~~~~~~~ 153 (181)
T COG0241 101 -------CDCRKPK---------P-----GMLLSALKEYNIDLSRSYVVGDRL-TDLQAAENAGIKGVLVLTGIG 153 (181)
T ss_pred -------CcccCCC---------h-----HHHHHHHHHhCCCccceEEecCcH-HHHHHHHHCCCCceEEEcCcc
Confidence 2222343 3 455669999999999999999999 789999999999888865543
No 113
>TIGR01512 ATPase-IB2_Cd heavy metal-(Cd/Co/Hg/Pb/Zn)-translocating P-type ATPase. .
Probab=96.43 E-value=0.0031 Score=69.64 Aligned_cols=83 Identities=17% Similarity=0.157 Sum_probs=63.7
Q ss_pred cchhHHHHHHHHHHcCC-eEEEEeCCChHHHHHhhhhhhccCCCCCCCcCCCccEEEEcCCCCCCCCCCCCccccccCcC
Q 011157 219 KNGQVLQFVKMLREKGK-KLFLLTNSPYYFVDGGMRFMLEDSTGYTDSWRELFDVVIAQANKPDFYTSDHPFRCYDTEKD 297 (492)
Q Consensus 219 k~p~l~~~L~~Lk~~Gk-klfL~TNS~~~y~~~vm~~l~~~~~~~g~~w~~yFD~iI~~a~KP~FF~~~~pfr~vd~~~g 297 (492)
..|++.+.|++|++.|+ +++++||.+...+..+++.+ ++.++|..+. | - +
T Consensus 363 l~~~~~e~i~~L~~~Gi~~v~vvTgd~~~~a~~i~~~l---------gi~~~f~~~~-----p--------~-------~ 413 (536)
T TIGR01512 363 PRPDAAEAIAELKALGIEKVVMLTGDRRAVAERVAREL---------GIDEVHAELL-----P--------E-------D 413 (536)
T ss_pred chHHHHHHHHHHHHcCCCcEEEEcCCCHHHHHHHHHHc---------CChhhhhccC-----c--------H-------H
Confidence 34789999999999999 99999999999999999985 4445553221 1 0 1
Q ss_pred ccccccccccCCCeeeccCCHHHHHHHhCCCCCcEEEEcccccccccccccCCc
Q 011157 298 TLAFTKVDAFIPNKIYYHGCLKSFLQITKWNGPEVIYFGDHLFSDLRGPSKAGW 351 (492)
Q Consensus 298 k~~~~~~~~l~~~~vY~~G~~~~~~~~lg~~~~~vLyvGDhi~gDI~~ak~~Gw 351 (492)
| ..+.+.++..+++|+||||.+. |+.+++++|.
T Consensus 414 K--------------------~~~i~~l~~~~~~v~~vGDg~n-D~~al~~A~v 446 (536)
T TIGR01512 414 K--------------------LEIVKELREKYGPVAMVGDGIN-DAPALAAADV 446 (536)
T ss_pred H--------------------HHHHHHHHhcCCEEEEEeCCHH-HHHHHHhCCE
Confidence 1 1266667778899999999995 5877888885
No 114
>COG4229 Predicted enolase-phosphatase [Energy production and conversion]
Probab=96.37 E-value=0.0079 Score=57.44 Aligned_cols=116 Identities=12% Similarity=0.170 Sum_probs=85.9
Q ss_pred HHhh--hhhhhHHHHhcCccchhccchhHHHHHHHHHHcCCeEEEEeCCChHHHHHhhhhhhccCCCCCCCcCCCccEEE
Q 011157 197 QHVH--RRGLVHRGILSDPNRYLVKNGQVLQFVKMLREKGKKLFLLTNSPYYFVDGGMRFMLEDSTGYTDSWRELFDVVI 274 (492)
Q Consensus 197 ~~vh--~~G~lk~~v~~np~kYi~k~p~l~~~L~~Lk~~GkklfL~TNS~~~y~~~vm~~l~~~~~~~g~~w~~yFD~iI 274 (492)
.|.| .+|.+|..+- |+..+.|++-++.|..+++-|+.+..--+....|. . .-+..+||+-
T Consensus 90 iWa~Gy~sgelkahly----------pDav~~ik~wk~~g~~vyiYSSGSV~AQkL~Fghs----~--agdL~~lfsG-- 151 (229)
T COG4229 90 IWAHGYESGELKAHLY----------PDAVQAIKRWKALGMRVYIYSSGSVKAQKLFFGHS----D--AGDLNSLFSG-- 151 (229)
T ss_pred HHHhccccCccccccC----------HhHHHHHHHHHHcCCcEEEEcCCCchhHHHhhccc----c--cccHHhhhcc--
Confidence 3544 6777776544 56888888889999999999999887777644442 1 2356666642
Q ss_pred EcCCCCCCCCCCCCccccccCcCccccccccccCCCeeeccCCHHHHHHHhCCCCCcEEEEcccccccccccccCCcEEE
Q 011157 275 AQANKPDFYTSDHPFRCYDTEKDTLAFTKVDAFIPNKIYYHGCLKSFLQITKWNGPEVIYFGDHLFSDLRGPSKAGWRTA 354 (492)
Q Consensus 275 ~~a~KP~FF~~~~pfr~vd~~~gk~~~~~~~~l~~~~vY~~G~~~~~~~~lg~~~~~vLyvGDhi~gDI~~ak~~GwrT~ 354 (492)
+| |++.|+-. ..+|+...++..|+.+.+||++-|++-- +-+|+..|++|+
T Consensus 152 -------yf---------DttiG~Kr-------------E~~SY~kIa~~iGl~p~eilFLSDn~~E-L~AA~~vGl~t~ 201 (229)
T COG4229 152 -------YF---------DTTIGKKR-------------ESQSYAKIAGDIGLPPAEILFLSDNPEE-LKAAAGVGLATG 201 (229)
T ss_pred -------ee---------eccccccc-------------cchhHHHHHHhcCCCchheEEecCCHHH-HHHHHhcchhee
Confidence 23 55544322 1267778999999999999999999988 878889999999
Q ss_pred EEeccc
Q 011157 355 AIIHEL 360 (492)
Q Consensus 355 ~VvpEl 360 (492)
+++.+-
T Consensus 202 l~~R~g 207 (229)
T COG4229 202 LAVRPG 207 (229)
T ss_pred eeecCC
Confidence 998765
No 115
>COG0560 SerB Phosphoserine phosphatase [Amino acid transport and metabolism]
Probab=95.81 E-value=0.032 Score=54.51 Aligned_cols=95 Identities=13% Similarity=0.112 Sum_probs=66.5
Q ss_pred hccchhHHHHHHHHHHcCCeEEEEeCCChHHHHHhhhhhhccCCCCCCCcCCCccEEEEcCCCCCCCCCCCCccccccCc
Q 011157 217 LVKNGQVLQFVKMLREKGKKLFLLTNSPYYFVDGGMRFMLEDSTGYTDSWRELFDVVIAQANKPDFYTSDHPFRCYDTEK 296 (492)
Q Consensus 217 i~k~p~l~~~L~~Lk~~GkklfL~TNS~~~y~~~vm~~l~~~~~~~g~~w~~yFD~iI~~a~KP~FF~~~~pfr~vd~~~ 296 (492)
+.-.|+..+++..+|++|.+++|+|.|...+++.+.+.+ ++...+-........ ++ |
T Consensus 76 ~~l~~ga~elv~~lk~~G~~v~iiSgg~~~lv~~ia~~l---------g~d~~~an~l~~~dG--~l------------t 132 (212)
T COG0560 76 LRLTPGAEELVAALKAAGAKVVIISGGFTFLVEPIAERL---------GIDYVVANELEIDDG--KL------------T 132 (212)
T ss_pred CcCCccHHHHHHHHHHCCCEEEEEcCChHHHHHHHHHHh---------CCchheeeEEEEeCC--EE------------e
Confidence 455789999999999999999999999999999999986 554555443333311 11 1
Q ss_pred CccccccccccCCCeeeccC---CHHHHHHHhCCCCCcEEEEcccccccc
Q 011157 297 DTLAFTKVDAFIPNKIYYHG---CLKSFLQITKWNGPEVIYFGDHLFSDL 343 (492)
Q Consensus 297 gk~~~~~~~~l~~~~vY~~G---~~~~~~~~lg~~~~~vLyvGDhi~gDI 343 (492)
|... .+-++..+ .+.++++.+|.+.+++..+||+.-. +
T Consensus 133 G~v~--------g~~~~~~~K~~~l~~~~~~~g~~~~~~~a~gDs~nD-l 173 (212)
T COG0560 133 GRVV--------GPICDGEGKAKALRELAAELGIPLEETVAYGDSAND-L 173 (212)
T ss_pred ceee--------eeecCcchHHHHHHHHHHHcCCCHHHeEEEcCchhh-H
Confidence 1111 01122222 2457788899999999999999865 5
No 116
>TIGR01545 YfhB_g-proteo haloacid dehalogenase superfamily, subfamily IF hydrolase, YfhB. The gene name comes from the E. coli gene. There is currently no information regarding the function of this gene.
Probab=95.79 E-value=0.069 Score=51.91 Aligned_cols=93 Identities=14% Similarity=0.112 Sum_probs=61.4
Q ss_pred ccchhHHHHHH-HHHHcCCeEEEEeCCChHHHHHhhhhhhccCCCCCCCcCCCccEEEEcCCCCCCCCCCCCcccccc-C
Q 011157 218 VKNGQVLQFVK-MLREKGKKLFLLTNSPYYFVDGGMRFMLEDSTGYTDSWRELFDVVIAQANKPDFYTSDHPFRCYDT-E 295 (492)
Q Consensus 218 ~k~p~l~~~L~-~Lk~~GkklfL~TNS~~~y~~~vm~~l~~~~~~~g~~w~~yFD~iI~~a~KP~FF~~~~pfr~vd~-~ 295 (492)
..-|++.+.|+ .+++.|.+++|+|||+..+++.+.+.. +|..-.++|-|.- .+ .
T Consensus 94 ~l~pga~e~L~~~l~~~G~~v~IvSas~~~~~~~ia~~~---------~~~~~~~~i~t~l---------------e~~~ 149 (210)
T TIGR01545 94 TAFPLVAERLRQYLESSDADIWLITGSPQPLVEAVYFDS---------NFIHRLNLIASQI---------------ERGN 149 (210)
T ss_pred CCCccHHHHHHHHHHhCCCEEEEEcCCcHHHHHHHHHhc---------cccccCcEEEEEe---------------EEeC
Confidence 34789999995 788899999999999999999999763 4544444442221 11 1
Q ss_pred cCccccccccccCCCeeeccCCHHHHHHHhCCCCCcEEEEcccccccc
Q 011157 296 KDTLAFTKVDAFIPNKIYYHGCLKSFLQITKWNGPEVIYFGDHLFSDL 343 (492)
Q Consensus 296 ~gk~~~~~~~~l~~~~vY~~G~~~~~~~~lg~~~~~vLyvGDhi~gDI 343 (492)
+|+. ..+..|..|=...+.+.+|.....+-..|||+ +|+
T Consensus 150 gg~~--------~g~~c~g~~Kv~rl~~~~~~~~~~~~aYsDS~-~D~ 188 (210)
T TIGR01545 150 GGWV--------LPLRCLGHEKVAQLEQKIGSPLKLYSGYSDSK-QDN 188 (210)
T ss_pred CceE--------cCccCCChHHHHHHHHHhCCChhheEEecCCc-ccH
Confidence 1221 11223334445556666775556777899999 776
No 117
>TIGR01511 ATPase-IB1_Cu copper-(or silver)-translocating P-type ATPase. One member from Halobacterium is annotated as "molybdenum-binding protein" although no evidence can be found for this classification.
Probab=95.61 E-value=0.019 Score=63.92 Aligned_cols=82 Identities=15% Similarity=0.143 Sum_probs=60.1
Q ss_pred cchhHHHHHHHHHHcCCeEEEEeCCChHHHHHhhhhhhccCCCCCCCcCCCccEEEEcCCCCCCCCCCCCccccccCcCc
Q 011157 219 KNGQVLQFVKMLREKGKKLFLLTNSPYYFVDGGMRFMLEDSTGYTDSWRELFDVVIAQANKPDFYTSDHPFRCYDTEKDT 298 (492)
Q Consensus 219 k~p~l~~~L~~Lk~~GkklfL~TNS~~~y~~~vm~~l~~~~~~~g~~w~~yFD~iI~~a~KP~FF~~~~pfr~vd~~~gk 298 (492)
..|++.++|++||+.|++++++||.+...++.+++.+ |.+ +| ...+| - +|
T Consensus 406 l~~~a~e~i~~Lk~~Gi~v~ilSgd~~~~a~~ia~~l-------gi~---~~-----~~~~p--------~-------~K 455 (562)
T TIGR01511 406 LRPEAKEVIQALKRRGIEPVMLTGDNRKTAKAVAKEL-------GIN---VR-----AEVLP--------D-------DK 455 (562)
T ss_pred ccHHHHHHHHHHHHcCCeEEEEcCCCHHHHHHHHHHc-------CCc---EE-----ccCCh--------H-------HH
Confidence 3578999999999999999999999999999999985 332 11 12122 0 11
Q ss_pred cccccccccCCCeeeccCCHHHHHHHhCCCCCcEEEEcccccccccccccCCc
Q 011157 299 LAFTKVDAFIPNKIYYHGCLKSFLQITKWNGPEVIYFGDHLFSDLRGPSKAGW 351 (492)
Q Consensus 299 ~~~~~~~~l~~~~vY~~G~~~~~~~~lg~~~~~vLyvGDhi~gDI~~ak~~Gw 351 (492)
+ ++.+.++.++++|+||||.+. |+.+++++|.
T Consensus 456 ~--------------------~~v~~l~~~~~~v~~VGDg~n-D~~al~~A~v 487 (562)
T TIGR01511 456 A--------------------ALIKELQEKGRVVAMVGDGIN-DAPALAQADV 487 (562)
T ss_pred H--------------------HHHHHHHHcCCEEEEEeCCCc-cHHHHhhCCE
Confidence 1 244555557899999999985 4877777874
No 118
>PF12710 HAD: haloacid dehalogenase-like hydrolase; PDB: 3P96_A 3N28_A 3FVV_A 1RKU_A 1RKV_A 1Y8A_A 2FEA_B 3KD3_B.
Probab=94.43 E-value=0.051 Score=50.42 Aligned_cols=35 Identities=14% Similarity=0.385 Sum_probs=32.6
Q ss_pred hhHHHHHHHHHHcCCeEEEEeCCChHHHHHhhhhh
Q 011157 221 GQVLQFVKMLREKGKKLFLLTNSPYYFVDGGMRFM 255 (492)
Q Consensus 221 p~l~~~L~~Lk~~GkklfL~TNS~~~y~~~vm~~l 255 (492)
|++.++|+.++++|.+++|+|.|+..++..+++.+
T Consensus 92 ~~~~e~i~~~~~~~~~v~IvS~~~~~~i~~~~~~~ 126 (192)
T PF12710_consen 92 PDAMELIRELKDNGIKVVIVSGSPDEIIEPIAERL 126 (192)
T ss_dssp TTHHHHHHHHHHTTSEEEEEEEEEHHHHHHHHHHT
T ss_pred hhHHHHHHHHHHCCCEEEEECCCcHHHHHHHHHHc
Confidence 77889999999999999999999999999999864
No 119
>TIGR01533 lipo_e_P4 5'-nucleotidase, lipoprotein e(P4) family. which in turn belongs to the haloacid dehalogenase (HAD) superfamily of aspartate-dependent hydrolases. Members are found on the outer membrane of Gram-negative bacteria and the cytoplasmic membrane of Gram-positive bacteria. Most members have classic lipoprotein signal sequences. A critical role of this 5'-nucleotidase in Haemophilus influenzae is the degradation of external riboside in order to allow transport into the cell. An earlier suggested role in hemin transport is no longer current. This enzyme may also have other physiologically significant roles.
Probab=94.19 E-value=0.12 Score=52.42 Aligned_cols=53 Identities=13% Similarity=0.178 Sum_probs=36.6
Q ss_pred cchhHHHHHHHHHHcCCeEEEEeCCChHHHHHhhhhhhccCCCCCCCcCC-CccEEEEcC
Q 011157 219 KNGQVLQFVKMLREKGKKLFLLTNSPYYFVDGGMRFMLEDSTGYTDSWRE-LFDVVIAQA 277 (492)
Q Consensus 219 k~p~l~~~L~~Lk~~GkklfL~TNS~~~y~~~vm~~l~~~~~~~g~~w~~-yFD~iI~~a 277 (492)
.-|++.++|+.|++.|.+++++||.+....+..+..|- ..++.. .+|.++...
T Consensus 119 ~ipGA~e~L~~L~~~G~~v~iVTnR~~~~~~~T~~~Lk------k~Gi~~~~~d~lllr~ 172 (266)
T TIGR01533 119 PVAGALDFLNYANSKGVKIFYVSNRSEKEKAATLKNLK------RFGFPQADEEHLLLKK 172 (266)
T ss_pred cCccHHHHHHHHHHCCCeEEEEeCCCcchHHHHHHHHH------HcCcCCCCcceEEeCC
Confidence 46899999999999999999999998655554443331 123333 246676654
No 120
>PLN02645 phosphoglycolate phosphatase
Probab=94.08 E-value=0.1 Score=53.57 Aligned_cols=53 Identities=19% Similarity=0.095 Sum_probs=37.5
Q ss_pred cchhHHHHHHHHHHcCCeEEEEeCCChHHHHHhhhhhhccCCCCCCCcCCCccEEEEcC
Q 011157 219 KNGQVLQFVKMLREKGKKLFLLTNSPYYFVDGGMRFMLEDSTGYTDSWRELFDVVIAQA 277 (492)
Q Consensus 219 k~p~l~~~L~~Lk~~GkklfL~TNS~~~y~~~vm~~l~~~~~~~g~~w~~yFD~iI~~a 277 (492)
.-|+..++|++||++|++++++||++..-...+++.+- ..+..-.+|.|++.+
T Consensus 45 ~~~ga~e~l~~lr~~g~~~~~~TN~~~~~~~~~~~~l~------~lGi~~~~~~I~ts~ 97 (311)
T PLN02645 45 LIEGVPETLDMLRSMGKKLVFVTNNSTKSRAQYGKKFE------SLGLNVTEEEIFSSS 97 (311)
T ss_pred cCcCHHHHHHHHHHCCCEEEEEeCCCCCCHHHHHHHHH------HCCCCCChhhEeehH
Confidence 34889999999999999999999988555444444331 123344567777766
No 121
>KOG2961 consensus Predicted hydrolase (HAD superfamily) [General function prediction only]
Probab=93.80 E-value=0.55 Score=43.95 Aligned_cols=46 Identities=20% Similarity=0.199 Sum_probs=36.3
Q ss_pred HHHHHHHhC----CCCCcEEEEcccccccccccccCCcEEEEEeccchhH
Q 011157 318 LKSFLQITK----WNGPEVIYFGDHLFSDLRGPSKAGWRTAAIIHELESE 363 (492)
Q Consensus 318 ~~~~~~~lg----~~~~~vLyvGDhi~gDI~~ak~~GwrT~~VvpEl~~E 363 (492)
-+.+....| .+++|+++|||-+++||.-|+..|--++.+-|....|
T Consensus 124 ~E~~~y~~~Nshv~~~se~~~vGDRlfTDI~~aN~mGs~gVw~~~gv~~~ 173 (190)
T KOG2961|consen 124 AEEVEYHFGNSHVCTSSELIMVGDRLFTDIVYANRMGSLGVWTEPGVRAE 173 (190)
T ss_pred HHHHHHHhCCcccCChhHeEEEccchhhhHhhhhhccceeEEeccccccc
Confidence 344444555 5789999999999999999999998888887766554
No 122
>COG4359 Uncharacterized conserved protein [Function unknown]
Probab=93.67 E-value=0.25 Score=47.50 Aligned_cols=57 Identities=12% Similarity=0.158 Sum_probs=49.4
Q ss_pred HHhhhhhhhHHHHhcCccchhccchhHHHHHHHHHHcCCeEEEEeCCChHHHHHhhhhhh
Q 011157 197 QHVHRRGLVHRGILSDPNRYLVKNGQVLQFVKMLREKGKKLFLLTNSPYYFVDGGMRFML 256 (492)
Q Consensus 197 ~~vh~~G~lk~~v~~np~kYi~k~p~l~~~L~~Lk~~GkklfL~TNS~~~y~~~vm~~l~ 256 (492)
.++|.+ + +++.+...+=|.-+|+.+++.+..++++..+.++|+..-.|+.++++-+.
T Consensus 55 ~~i~~s--~-~Eile~llk~i~Idp~fKef~e~ike~di~fiVvSsGm~~fI~~lfe~iv 111 (220)
T COG4359 55 GSIHSS--L-EEILEFLLKDIKIDPGFKEFVEWIKEHDIPFIVVSSGMDPFIYPLFEGIV 111 (220)
T ss_pred HhcCCC--H-HHHHHHHHhhcccCccHHHHHHHHHHcCCCEEEEeCCCchHHHHHHHhhc
Confidence 445544 4 78888888888889999999999999999999999999999999888765
No 123
>PRK10671 copA copper exporting ATPase; Provisional
Probab=93.50 E-value=0.087 Score=61.34 Aligned_cols=81 Identities=16% Similarity=0.194 Sum_probs=61.0
Q ss_pred hhHHHHHHHHHHcCCeEEEEeCCChHHHHHhhhhhhccCCCCCCCcCCCccEEEEcCCCCCCCCCCCCccccccCcCccc
Q 011157 221 GQVLQFVKMLREKGKKLFLLTNSPYYFVDGGMRFMLEDSTGYTDSWRELFDVVIAQANKPDFYTSDHPFRCYDTEKDTLA 300 (492)
Q Consensus 221 p~l~~~L~~Lk~~GkklfL~TNS~~~y~~~vm~~l~~~~~~~g~~w~~yFD~iI~~a~KP~FF~~~~pfr~vd~~~gk~~ 300 (492)
|+..+.|++|++.|++++++|+.+...+..+.+.+ ++.++|. +. .| + +|.
T Consensus 653 ~~a~~~i~~L~~~gi~v~~~Tgd~~~~a~~ia~~l---------gi~~~~~----~~-~p--------------~-~K~- 702 (834)
T PRK10671 653 SDSVAALQRLHKAGYRLVMLTGDNPTTANAIAKEA---------GIDEVIA----GV-LP--------------D-GKA- 702 (834)
T ss_pred hhHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHc---------CCCEEEe----CC-CH--------------H-HHH-
Confidence 67889999999999999999999999999999875 4433221 11 11 0 121
Q ss_pred cccccccCCCeeeccCCHHHHHHHhCCCCCcEEEEcccccccccccccCCc
Q 011157 301 FTKVDAFIPNKIYYHGCLKSFLQITKWNGPEVIYFGDHLFSDLRGPSKAGW 351 (492)
Q Consensus 301 ~~~~~~l~~~~vY~~G~~~~~~~~lg~~~~~vLyvGDhi~gDI~~ak~~Gw 351 (492)
++++.++..+.+|++|||.+. |+.+.+++|.
T Consensus 703 -------------------~~i~~l~~~~~~v~~vGDg~n-D~~al~~Agv 733 (834)
T PRK10671 703 -------------------EAIKRLQSQGRQVAMVGDGIN-DAPALAQADV 733 (834)
T ss_pred -------------------HHHHHHhhcCCEEEEEeCCHH-HHHHHHhCCe
Confidence 266667778899999999985 5877788887
No 124
>PF08645 PNK3P: Polynucleotide kinase 3 phosphatase; InterPro: IPR013954 Polynucleotide kinase 3 phosphatases play a role in the repair of single breaks in DNA induced by DNA-damaging agents such as gamma radiation and camptothecin []. ; PDB: 2FPW_A 2FPR_A 2FPX_A 2FPS_A 2FPU_B 3ZVM_A 1YJ5_A 3ZVL_A 3U7E_B 3U7G_A ....
Probab=93.21 E-value=0.15 Score=47.65 Aligned_cols=34 Identities=26% Similarity=0.403 Sum_probs=28.7
Q ss_pred hcCccchhccchhHHHHHHHHHHcCCeEEEEeCC
Q 011157 210 LSDPNRYLVKNGQVLQFVKMLREKGKKLFLLTNS 243 (492)
Q Consensus 210 ~~np~kYi~k~p~l~~~L~~Lk~~GkklfL~TNS 243 (492)
..+|+.+.--.|++++.|++|.+.|++++++||-
T Consensus 21 ~~~~~D~~~~~~~v~~~L~~l~~~Gy~IvIvTNQ 54 (159)
T PF08645_consen 21 PKDPDDWKFFPPGVPEALRELHKKGYKIVIVTNQ 54 (159)
T ss_dssp -SSTCGGEEC-TTHHHHHHHHHHTTEEEEEEEE-
T ss_pred cCCHHHhhhcchhHHHHHHHHHhcCCeEEEEeCc
Confidence 3478888888889999999999999999999996
No 125
>PF03031 NIF: NLI interacting factor-like phosphatase; InterPro: IPR004274 The function of this domain is unclear. It is found in proteins of diverse function including phosphatases some of which may be active in active in ternary elongation complexes and a number of NLI interacting factors. In the phospatases this domain is often present N-terminal to the BRCT domain (IPR001357 from INTERPRO).; GO: 0005515 protein binding; PDB: 3L0Y_A 2GHQ_A 3PGL_A 3L0C_B 1TA0_A 2GHT_A 3L0B_B 1T9Z_A 3QLE_A 2Q5E_E ....
Probab=93.15 E-value=0.15 Score=46.55 Aligned_cols=56 Identities=11% Similarity=0.168 Sum_probs=42.8
Q ss_pred ccchhccchhHHHHHHHHHHcCCeEEEEeCCChHHHHHhhhhhhccCCCCCCCcCCCccEEEEcC
Q 011157 213 PNRYLVKNGQVLQFVKMLREKGKKLFLLTNSPYYFVDGGMRFMLEDSTGYTDSWRELFDVVIAQA 277 (492)
Q Consensus 213 p~kYi~k~p~l~~~L~~Lk~~GkklfL~TNS~~~y~~~vm~~l~~~~~~~g~~w~~yFD~iI~~a 277 (492)
-..++.+.|++.++|+.+.+. ..+++.|++...|++.+++.+. +. ..+|+-++...
T Consensus 31 ~~~~v~~RP~l~~FL~~l~~~-~ev~i~T~~~~~ya~~v~~~ld-------p~-~~~~~~~~~r~ 86 (159)
T PF03031_consen 31 GGYYVKLRPGLDEFLEELSKH-YEVVIWTSASEEYAEPVLDALD-------PN-GKLFSRRLYRD 86 (159)
T ss_dssp EEEEEEE-TTHHHHHHHHHHH-CEEEEE-SS-HHHHHHHHHHHT-------TT-TSSEEEEEEGG
T ss_pred cceeEeeCchHHHHHHHHHHh-ceEEEEEeehhhhhhHHHHhhh-------hh-ccccccccccc
Confidence 356777899999999999655 9999999999999999999873 22 56777777554
No 126
>COG4996 Predicted phosphatase [General function prediction only]
Probab=91.96 E-value=0.19 Score=45.90 Aligned_cols=60 Identities=17% Similarity=0.081 Sum_probs=48.1
Q ss_pred HhcCccchhccchhHHHHHHHHHHcCCeEEEEeCCChHHHHHhhhhhhccCCCCCCCcCCCccEEEEcC
Q 011157 209 ILSDPNRYLVKNGQVLQFVKMLREKGKKLFLLTNSPYYFVDGGMRFMLEDSTGYTDSWRELFDVVIAQA 277 (492)
Q Consensus 209 v~~np~kYi~k~p~l~~~L~~Lk~~GkklfL~TNS~~~y~~~vm~~l~~~~~~~g~~w~~yFD~iI~~a 277 (492)
+..+-+.-++--|.++++|+.+|.+|.-+-++|-+..+-+-.++.-+ +...||+++|...
T Consensus 32 i~Ds~G~ev~L~~~v~~~l~warnsG~i~~~~sWN~~~kA~~aLral---------~~~~yFhy~VieP 91 (164)
T COG4996 32 IEDSKGREVHLFPDVKETLKWARNSGYILGLASWNFEDKAIKALRAL---------DLLQYFHYIVIEP 91 (164)
T ss_pred eecCCCeEEEEcHHHHHHHHHHHhCCcEEEEeecCchHHHHHHHHHh---------chhhhEEEEEecC
Confidence 34455666777789999999999999988888888888777777764 8889999988654
No 127
>PF05152 DUF705: Protein of unknown function (DUF705); InterPro: IPR007827 This family contains uncharacterised baculoviral proteins.
Probab=91.69 E-value=0.42 Score=48.81 Aligned_cols=64 Identities=22% Similarity=0.349 Sum_probs=54.1
Q ss_pred CccchhccchhHHHHHHHHHHcCCeEEEEeCCChHHHHHhhhhhhccCCCCCCCcCCCccEEEEcCCCCCCCC
Q 011157 212 DPNRYLVKNGQVLQFVKMLREKGKKLFLLTNSPYYFVDGGMRFMLEDSTGYTDSWRELFDVVIAQANKPDFYT 284 (492)
Q Consensus 212 np~kYi~k~p~l~~~L~~Lk~~GkklfL~TNS~~~y~~~vm~~l~~~~~~~g~~w~~yFD~iI~~a~KP~FF~ 284 (492)
+-+.=-.++|.+..-|.+||+.|.-+.|=|-.+.+++...|+.+ +..+|||+||++..+-+-..
T Consensus 136 d~~~v~Ir~~~v~~sL~~Lk~~g~vLvLWSyG~~eHV~~sl~~~---------~L~~~Fd~ii~~G~~~~~~~ 199 (297)
T PF05152_consen 136 DEGDVRIRDPAVYDSLRELKEQGCVLVLWSYGNREHVRHSLKEL---------KLEGYFDIIICGGNKAGEYN 199 (297)
T ss_pred cCCccccCChHHHHHHHHHHHcCCEEEEecCCCHHHHHHHHHHh---------CCccccEEEEeCCccCCcCC
Confidence 33333457899999999999999999999999999999999985 66799999999997665444
No 128
>KOG1615 consensus Phosphoserine phosphatase [Amino acid transport and metabolism]
Probab=91.22 E-value=1.3 Score=43.07 Aligned_cols=95 Identities=16% Similarity=0.220 Sum_probs=61.1
Q ss_pred cchhHHHHHHHHHHcCCeEEEEeCCChHHHHHhhhhhhccCCCCCCCcCCCccEEEEcCCCCCCCCCCC--CccccccCc
Q 011157 219 KNGQVLQFVKMLREKGKKLFLLTNSPYYFVDGGMRFMLEDSTGYTDSWRELFDVVIAQANKPDFYTSDH--PFRCYDTEK 296 (492)
Q Consensus 219 k~p~l~~~L~~Lk~~GkklfL~TNS~~~y~~~vm~~l~~~~~~~g~~w~~yFD~iI~~a~KP~FF~~~~--pfr~vd~~~ 296 (492)
-.|+++++.++|++.|.+++|+|+.=...++.+.+.| |.+....| |++=.|-..|+ .| |+..
T Consensus 89 lT~Gi~eLv~~L~~~~~~v~liSGGF~~~i~~Va~~L-------gi~~~n~y------AN~l~fd~~Gk~~gf---d~~~ 152 (227)
T KOG1615|consen 89 LTPGIRELVSRLHARGTQVYLISGGFRQLIEPVAEQL-------GIPKSNIY------ANELLFDKDGKYLGF---DTNE 152 (227)
T ss_pred cCCCHHHHHHHHHHcCCeEEEEcCChHHHHHHHHHHh-------CCcHhhhh------hheeeeccCCccccc---ccCC
Confidence 4689999999999999999999999999999999986 55543333 32222222221 12 2211
Q ss_pred CccccccccccCCCeeeccCCHHHHHH-HhCCCCCcEEEEcccccccc
Q 011157 297 DTLAFTKVDAFIPNKIYYHGCLKSFLQ-ITKWNGPEVIYFGDHLFSDL 343 (492)
Q Consensus 297 gk~~~~~~~~l~~~~vY~~G~~~~~~~-~lg~~~~~vLyvGDhi~gDI 343 (492)
|.+=+||-.+.+.. .-+..-+.+++|||--.. +
T Consensus 153 -------------ptsdsggKa~~i~~lrk~~~~~~~~mvGDGatD-l 186 (227)
T KOG1615|consen 153 -------------PTSDSGGKAEVIALLRKNYNYKTIVMVGDGATD-L 186 (227)
T ss_pred -------------ccccCCccHHHHHHHHhCCChheeEEecCCccc-c
Confidence 22223444332222 116777899999998654 6
No 129
>PF13344 Hydrolase_6: Haloacid dehalogenase-like hydrolase; PDB: 2HO4_B 1YV9_A 1WVI_B 3EPR_A 2P27_A 2OYC_A 2CFT_A 2P69_A 2CFS_A 2CFR_A ....
Probab=91.13 E-value=0.3 Score=42.05 Aligned_cols=35 Identities=23% Similarity=0.268 Sum_probs=26.1
Q ss_pred cchhHHHHHHHHHHcCCeEEEEeCCChHHHHHhhh
Q 011157 219 KNGQVLQFVKMLREKGKKLFLLTNSPYYFVDGGMR 253 (492)
Q Consensus 219 k~p~l~~~L~~Lk~~GkklfL~TNS~~~y~~~vm~ 253 (492)
+-|+..++|++|+++|++++++||++..-....++
T Consensus 15 ~ipga~e~l~~L~~~g~~~~~lTNns~~s~~~~~~ 49 (101)
T PF13344_consen 15 PIPGAVEALDALRERGKPVVFLTNNSSRSREEYAK 49 (101)
T ss_dssp E-TTHHHHHHHHHHTTSEEEEEES-SSS-HHHHHH
T ss_pred cCcCHHHHHHHHHHcCCCEEEEeCCCCCCHHHHHH
Confidence 46899999999999999999999998443333333
No 130
>PF11019 DUF2608: Protein of unknown function (DUF2608); InterPro: IPR022565 This family is conserved in Bacteria. The function is not known.
Probab=90.01 E-value=2 Score=43.15 Aligned_cols=124 Identities=17% Similarity=0.231 Sum_probs=75.0
Q ss_pred ccchhccchhHHHHHHHHHHcCCeEEEEeCCChHHHHHhhhhhhccCCCCCCCcCCCccEEEEcCCCCCCCCCCCCcccc
Q 011157 213 PNRYLVKNGQVLQFVKMLREKGKKLFLLTNSPYYFVDGGMRFMLEDSTGYTDSWRELFDVVIAQANKPDFYTSDHPFRCY 292 (492)
Q Consensus 213 p~kYi~k~p~l~~~L~~Lk~~GkklfL~TNS~~~y~~~vm~~l~~~~~~~g~~w~~yFD~iI~~a~KP~FF~~~~pfr~v 292 (492)
..++.--++.++.+++.|++.|++++-+|..+..+....+++|-.- |.+. +++. |.+..-++..
T Consensus 76 ~~~~~lie~~~~~~i~~lq~~~~~v~alT~~~~~~~~~t~~~Lk~~----gi~f--------s~~~----~~~~~~~~~~ 139 (252)
T PF11019_consen 76 LRKMELIESDVPNIINSLQNKGIPVIALTARGPNMEDWTLRELKSL----GIDF--------SSSS----FPEDGIISFP 139 (252)
T ss_pred hcceEEcchhHHHHHHHHHHCCCcEEEEcCCChhhHHHHHHHHHHC----CCCc--------cccc----cccCcceecc
Confidence 3344445689999999999999999999999999999999987421 2221 1110 1110000000
Q ss_pred ccCcCccccccccccCCCeeeccCC-----HHHHHHHhCCCCCcEEEEcccccccccc---c-ccCCcEEEEE
Q 011157 293 DTEKDTLAFTKVDAFIPNKIYYHGC-----LKSFLQITKWNGPEVIYFGDHLFSDLRG---P-SKAGWRTAAI 356 (492)
Q Consensus 293 d~~~gk~~~~~~~~l~~~~vY~~G~-----~~~~~~~lg~~~~~vLyvGDhi~gDI~~---a-k~~GwrT~~V 356 (492)
..... + ...-.+..|-+|.+|- +..++..+|..|+.|+||.|+... |.+ + +..|..-..+
T Consensus 140 ~~~~~-~--~~~~~~~~GIlft~~~~KG~~L~~fL~~~~~~pk~IIfIDD~~~n-l~sv~~a~k~~~I~f~G~ 208 (252)
T PF11019_consen 140 VFDSA-L--SRAPSFYDGILFTGGQDKGEVLKYFLDKINQSPKKIIFIDDNKEN-LKSVEKACKKSGIDFIGF 208 (252)
T ss_pred cccCC-C--CCCceeecCeEEeCCCccHHHHHHHHHHcCCCCCeEEEEeCCHHH-HHHHHHHHhhCCCcEEEE
Confidence 00000 0 0011133455555553 667899999999999999999877 432 2 3455544444
No 131
>COG4850 Uncharacterized conserved protein [Function unknown]
Probab=89.60 E-value=1.1 Score=46.69 Aligned_cols=58 Identities=21% Similarity=0.406 Sum_probs=49.3
Q ss_pred chhHHHHHHHHHHcC-CeEEEEeCCChHHHHHhhhhhhccCCCCC----CCcCCCccEEEEcC
Q 011157 220 NGQVLQFVKMLREKG-KKLFLLTNSPYYFVDGGMRFMLEDSTGYT----DSWRELFDVVIAQA 277 (492)
Q Consensus 220 ~p~l~~~L~~Lk~~G-kklfL~TNS~~~y~~~vm~~l~~~~~~~g----~~w~~yFD~iI~~a 277 (492)
-|++..|++.|-+.| ..+|-+|||+|..-...-+|+.....++| .+|-..||.++..+
T Consensus 198 ipGV~~~yr~l~~~~~apvfYvSnSPw~~f~~L~efi~~~~~P~GPl~L~~~g~~~~~i~~sg 260 (373)
T COG4850 198 IPGVSAWYRALTNLGDAPVFYVSNSPWQLFPTLQEFITNRNFPYGPLLLRRWGGVLDNIIESG 260 (373)
T ss_pred CCCHHHHHHHHHhcCCCCeEEecCChhHhHHHHHHHHhcCCCCCCchhHhhcCCcccccccch
Confidence 489999999999988 88999999999999998888877767776 47777788877765
No 132
>TIGR01689 EcbF-BcbF capsule biosynthesis phosphatase. Due to the likelihood that the substrates of these enzymes are different depending on the nature of the particular polysaccharides associated with each species, this model has been classified as a subfamily despite the close homology.
Probab=89.54 E-value=0.83 Score=41.27 Aligned_cols=99 Identities=11% Similarity=0.137 Sum_probs=63.2
Q ss_pred hhhhHHHHhcCccchh--ccchhHHHHHHHHHHcCCeEEEEeCCChHHHH------------HhhhhhhccCCCCCCCcC
Q 011157 202 RGLVHRGILSDPNRYL--VKNGQVLQFVKMLREKGKKLFLLTNSPYYFVD------------GGMRFMLEDSTGYTDSWR 267 (492)
Q Consensus 202 ~G~lk~~v~~np~kYi--~k~p~l~~~L~~Lk~~GkklfL~TNS~~~y~~------------~vm~~l~~~~~~~g~~w~ 267 (492)
+|++- ..+.+.|. .+.+++.+.|+++++.|.+++++|.-+..... .+.++|- .|.
T Consensus 9 DGTL~---~~~~~~y~~~~~~~~~ie~L~~l~~~G~~IiiaTGR~~~~~~~n~~~i~~~~~~~t~~wL~--------k~~ 77 (126)
T TIGR01689 9 DNTIT---LTENGDYANVAPILAVIEKLRHYKALGFEIVISSSRNMRTYEGNVGKINIHTLPIIILWLN--------QHN 77 (126)
T ss_pred CCCcc---cCCCCcccccccCHHHHHHHHHHHHCCCEEEEECCCCchhhhccccccchhhHHHHHHHHH--------HcC
Confidence 56662 22334454 45688999999999999999999999988876 7777763 233
Q ss_pred CCccEEEEcCCCC---CCCCCCCCccccccCcCccccccccccCCCeeeccCCHHHHHHHhCCCCC
Q 011157 268 ELFDVVIAQANKP---DFYTSDHPFRCYDTEKDTLAFTKVDAFIPNKIYYHGCLKSFLQITKWNGP 330 (492)
Q Consensus 268 ~yFD~iI~~a~KP---~FF~~~~pfr~vd~~~gk~~~~~~~~l~~~~vY~~G~~~~~~~~lg~~~~ 330 (492)
=-||-++++.-=| .|+-+.+. -+|..+..=+.++..++++.+..
T Consensus 78 ipYd~l~~~kp~~~~~~~~~dD~~-------------------ir~~~~~~~~~~~~~~~~~~~~~ 124 (126)
T TIGR01689 78 VPYDEIYVGKPWCGHDGFYVDDRA-------------------IRPSEFSSLTYDEINTLTKIDKS 124 (126)
T ss_pred CCCceEEeCCCcCCCCCceecchh-------------------hCHHHHHhcCHHHHHHHHhhccc
Confidence 3456677654111 23333221 12566666777778888765543
No 133
>COG1778 Low specificity phosphatase (HAD superfamily) [General function prediction only]
Probab=88.08 E-value=0.79 Score=43.10 Aligned_cols=73 Identities=23% Similarity=0.327 Sum_probs=51.8
Q ss_pred HHHHHHcCCeEEEEeCCChHHHHHhhhhhhccCCCCCCCcCCCccEEEEcCCCCCCCCCCCCccccccCcCccccccccc
Q 011157 227 VKMLREKGKKLFLLTNSPYYFVDGGMRFMLEDSTGYTDSWRELFDVVIAQANKPDFYTSDHPFRCYDTEKDTLAFTKVDA 306 (492)
Q Consensus 227 L~~Lk~~GkklfL~TNS~~~y~~~vm~~l~~~~~~~g~~w~~yFD~iI~~a~KP~FF~~~~pfr~vd~~~gk~~~~~~~~ 306 (492)
++.|.+.|++++++|.-...-++.=++-| |..
T Consensus 44 ik~l~~~Gi~vAIITGr~s~ive~Ra~~L-------GI~----------------------------------------- 75 (170)
T COG1778 44 IKLLLKSGIKVAIITGRDSPIVEKRAKDL-------GIK----------------------------------------- 75 (170)
T ss_pred HHHHHHcCCeEEEEeCCCCHHHHHHHHHc-------CCc-----------------------------------------
Confidence 45667899999999999988888877654 221
Q ss_pred cCCCeeeccC-----CHHHHHHHhCCCCCcEEEEcccccccccccccCCcE
Q 011157 307 FIPNKIYYHG-----CLKSFLQITKWNGPEVIYFGDHLFSDLRGPSKAGWR 352 (492)
Q Consensus 307 l~~~~vY~~G-----~~~~~~~~lg~~~~~vLyvGDhi~gDI~~ak~~Gwr 352 (492)
.+|+|- .++++++.+++.+++|.|+||.+.. +-.-++.|..
T Consensus 76 ----~~~qG~~dK~~a~~~L~~~~~l~~e~~ayiGDD~~D-lpvm~~vGls 121 (170)
T COG1778 76 ----HLYQGISDKLAAFEELLKKLNLDPEEVAYVGDDLVD-LPVMEKVGLS 121 (170)
T ss_pred ----eeeechHhHHHHHHHHHHHhCCCHHHhhhhcCcccc-HHHHHHcCCc
Confidence 122221 1455899999999999999998765 5222455654
No 134
>TIGR01522 ATPase-IIA2_Ca golgi membrane calcium-translocating P-type ATPase. The calcium P-type ATPases have been characterized as Type IIA based on a phylogenetic analysis which distinguishes this group from the Type IIB PMCA calcium pump modelled by TIGR01517. A separate analysis divides Type IIA into sub-types, SERCA and PMR1 the former of which is modelled by TIGR01116.
Probab=87.92 E-value=1 Score=52.90 Aligned_cols=105 Identities=11% Similarity=0.091 Sum_probs=71.0
Q ss_pred chhHHHHHHHHHHcCCeEEEEeCCChHHHHHhhhhhhccCCCCCCCcCCCccEEEEcCCCCCCCCCCCCccccccCcCcc
Q 011157 220 NGQVLQFVKMLREKGKKLFLLTNSPYYFVDGGMRFMLEDSTGYTDSWRELFDVVIAQANKPDFYTSDHPFRCYDTEKDTL 299 (492)
Q Consensus 220 ~p~l~~~L~~Lk~~GkklfL~TNS~~~y~~~vm~~l~~~~~~~g~~w~~yFD~iI~~a~KP~FF~~~~pfr~vd~~~gk~ 299 (492)
.|++++.++.||++|+++.++|+-+..-+..+.+.+ ++.+.++.++++.. +...+.
T Consensus 530 r~~~~~~i~~l~~~Gi~v~miTGD~~~tA~~ia~~~---------Gi~~~~~~~v~g~~----------l~~~~~----- 585 (884)
T TIGR01522 530 RPGVKEAVTTLITGGVRIIMITGDSQETAVSIARRL---------GMPSKTSQSVSGEK----------LDAMDD----- 585 (884)
T ss_pred hhHHHHHHHHHHHCCCeEEEECCCCHHHHHHHHHHc---------CCCCCCCceeEhHH----------hHhCCH-----
Confidence 369999999999999999999999999999998875 45556666666552 111010
Q ss_pred cccccc-ccCCCeeeccCCHH---HHHHHhCCCCCcEEEEcccccccccccccCCc
Q 011157 300 AFTKVD-AFIPNKIYYHGCLK---SFLQITKWNGPEVIYFGDHLFSDLRGPSKAGW 351 (492)
Q Consensus 300 ~~~~~~-~l~~~~vY~~G~~~---~~~~~lg~~~~~vLyvGDhi~gDI~~ak~~Gw 351 (492)
.... -+.+..||..-+-+ .+.+.++..|..|+++||.+.. +-+.++++.
T Consensus 586 --~~l~~~~~~~~Vfar~~P~~K~~iv~~lq~~g~~v~mvGDGvND-~pAl~~AdV 638 (884)
T TIGR01522 586 --QQLSQIVPKVAVFARASPEHKMKIVKALQKRGDVVAMTGDGVND-APALKLADI 638 (884)
T ss_pred --HHHHHHhhcCeEEEECCHHHHHHHHHHHHHCCCEEEEECCCccc-HHHHHhCCe
Confidence 0000 12234566554422 3555666678999999999876 756566663
No 135
>TIGR01993 Pyr-5-nucltdase pyrimidine 5'-nucleotidase. These enzymes are members of the haloacid dehalogenase (HAD) superfamily of hydrolases, specifically the IA subfamily (variant 3, TIGR01509).
Probab=87.88 E-value=0.68 Score=43.16 Aligned_cols=39 Identities=26% Similarity=0.247 Sum_probs=23.4
Q ss_pred cEEEEeccccccccccchHHHHHHHHHHHHHHhcCCCcc
Q 011157 49 QVYGFDYDYTLAHYSSNLQSLIYDLAKEHMVNEFRYPEV 87 (492)
Q Consensus 49 ~~iGFDmDyTLa~Y~~~~~~l~y~~~~~~LV~~~gYP~~ 87 (492)
++|.|||||||+--.+.+...+=+.+.+.+....|.|..
T Consensus 1 ~~viFDlDGTL~ds~~~~~~~~~~~~~~~~~~~~g~~~~ 39 (184)
T TIGR01993 1 DVWFFDLDNTLYPHSAGIFLQIDRNITEFVAARLKLSEE 39 (184)
T ss_pred CeEEEeCCCCCCCCcccHHHHHHHHHHHHHHHHcCcCHH
Confidence 579999999999554433332222333445555787643
No 136
>TIGR01452 PGP_euk phosphoglycolate/pyridoxal phosphate phosphatase family. This model is closely related to a family of bacterial sequences including the E. coli NagD and B. subtilus AraL genes which are characterized by the ability to hydrolyze para-nitrophenylphosphate (pNPPases or NPPases). The chlamydomonas PGPase does not catalyze this reaction and so presumably these two groups have different functions and substrate specificities. Many of the genes in this alignment have been annotated as pNPPases due to this association.
Probab=87.49 E-value=1.3 Score=44.69 Aligned_cols=27 Identities=19% Similarity=0.233 Sum_probs=23.6
Q ss_pred cchhHHHHHHHHHHcCCeEEEEeCCCh
Q 011157 219 KNGQVLQFVKMLREKGKKLFLLTNSPY 245 (492)
Q Consensus 219 k~p~l~~~L~~Lk~~GkklfL~TNS~~ 245 (492)
.-|+..++|++|+++|+++.++||++.
T Consensus 19 ~~~ga~e~l~~L~~~g~~~~~~Tnns~ 45 (279)
T TIGR01452 19 VVPGAPELLDRLARAGKAALFVTNNST 45 (279)
T ss_pred eCcCHHHHHHHHHHCCCeEEEEeCCCC
Confidence 457899999999999999999999653
No 137
>PRK11033 zntA zinc/cadmium/mercury/lead-transporting ATPase; Provisional
Probab=86.99 E-value=0.77 Score=52.99 Aligned_cols=36 Identities=17% Similarity=0.042 Sum_probs=33.9
Q ss_pred chhHHHHHHHHHHcCCeEEEEeCCChHHHHHhhhhh
Q 011157 220 NGQVLQFVKMLREKGKKLFLLTNSPYYFVDGGMRFM 255 (492)
Q Consensus 220 ~p~l~~~L~~Lk~~GkklfL~TNS~~~y~~~vm~~l 255 (492)
.|++.+.+++||+.|+++.++|+.+...+..+.+.+
T Consensus 570 r~~a~~~i~~L~~~gi~~~llTGd~~~~a~~ia~~l 605 (741)
T PRK11033 570 RADARQAISELKALGIKGVMLTGDNPRAAAAIAGEL 605 (741)
T ss_pred chhHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHc
Confidence 478999999999999999999999999999999986
No 138
>COG5610 Predicted hydrolase (HAD superfamily) [General function prediction only]
Probab=86.93 E-value=1.4 Score=47.73 Aligned_cols=112 Identities=17% Similarity=0.231 Sum_probs=70.6
Q ss_pred hccchhHHHHHHHHHHcCCeEEEEeCCChHHHHHhhhhhhccCCCCCCCcCCCccEEEEcCCCCCCCCCCCCcccccc-C
Q 011157 217 LVKNGQVLQFVKMLREKGKKLFLLTNSPYYFVDGGMRFMLEDSTGYTDSWRELFDVVIAQANKPDFYTSDHPFRCYDT-E 295 (492)
Q Consensus 217 i~k~p~l~~~L~~Lk~~GkklfL~TNS~~~y~~~vm~~l~~~~~~~g~~w~~yFD~iI~~a~KP~FF~~~~pfr~vd~-~ 295 (492)
+.|+.+..++.+...+.|++++|+|.-- +-..+++-++... |.+. . ..|++.-.. .
T Consensus 98 Lypn~~~~eL~e~ai~n~krVIlISDMY--lps~Il~~~L~s~---g~d~----------------~--nipiY~S~e~r 154 (635)
T COG5610 98 LYPNKKNIELVEEAIKNEKRVILISDMY--LPSSILRTFLNSF---GPDF----------------N--NIPIYMSSEFR 154 (635)
T ss_pred eeccccchHHHHHHHhCCCeEEEEeccc--CcHHHHHHHHHhc---CCCc----------------c--Cceeeecceee
Confidence 3456678899999999999999998642 2233333333211 2221 0 112211000 0
Q ss_pred cCccccccccccCCCeeeccCCHHHHHHHhCCCCCcEEEEcccccccccccccCCcEEEEEeccchhHHH
Q 011157 296 KDTLAFTKVDAFIPNKIYYHGCLKSFLQITKWNGPEVIYFGDHLFSDLRGPSKAGWRTAAIIHELESEIR 365 (492)
Q Consensus 296 ~gk~~~~~~~~l~~~~vY~~G~~~~~~~~lg~~~~~vLyvGDhi~gDI~~ak~~GwrT~~VvpEl~~Ei~ 365 (492)
-.|.. |.. ++.+++.-++++.+.+-+||+..+|++.||+.|.-|..-+.++..=++
T Consensus 155 l~KnS---------g~L-----Fk~Vlk~EnVd~~~w~H~GDN~~aD~l~pk~LgI~Tlf~~s~l~~~ee 210 (635)
T COG5610 155 LKKNS---------GNL-----FKAVLKLENVDPKKWIHCGDNWVADYLKPKNLGISTLFYISQLLPYEE 210 (635)
T ss_pred hhccc---------chH-----HHHHHhhcCCChhheEEecCchhhhhcCccccchhHHHHHHHhhhHhh
Confidence 00111 233 345899999999999999999999999999999988766666554333
No 139
>PRK14988 GMP/IMP nucleotidase; Provisional
Probab=85.47 E-value=0.83 Score=44.55 Aligned_cols=43 Identities=14% Similarity=0.101 Sum_probs=25.0
Q ss_pred cCCCccEEEEeccccccccccchHHHHHHHHHHHHHHhcCCCcc
Q 011157 44 RLDNIQVYGFDYDYTLAHYSSNLQSLIYDLAKEHMVNEFRYPEV 87 (492)
Q Consensus 44 ~l~~i~~iGFDmDyTLa~Y~~~~~~l~y~~~~~~LV~~~gYP~~ 87 (492)
.-..+++|.|||||||+-.... .....+...+.+....|.|.+
T Consensus 6 ~~~~~k~vIFDlDGTL~d~~~~-~~~~~~~~~~~~~~~~G~~~~ 48 (224)
T PRK14988 6 AWQDVDTVLLDMDGTLLDLAFD-NYFWQKLVPETLGAQRGISPQ 48 (224)
T ss_pred CcccCCEEEEcCCCCccchhhh-chHHHhhHHHHHHHHhCcCHH
Confidence 3456899999999999994211 011112233344455677743
No 140
>KOG3120 consensus Predicted haloacid dehalogenase-like hydrolase [General function prediction only]
Probab=85.04 E-value=2.8 Score=41.57 Aligned_cols=50 Identities=12% Similarity=0.327 Sum_probs=44.7
Q ss_pred cchhHHHHHHHHHHcCC-eEEEEeCCChHHHHHhhhhhhccCCCCCCCcCCCccEEEEcC
Q 011157 219 KNGQVLQFVKMLREKGK-KLFLLTNSPYYFVDGGMRFMLEDSTGYTDSWRELFDVVIAQA 277 (492)
Q Consensus 219 k~p~l~~~L~~Lk~~Gk-klfL~TNS~~~y~~~vm~~l~~~~~~~g~~w~~yFD~iI~~a 277 (492)
-.|++.++++.+++.|- .+.++|.++.-|++.++++. +.-++|+-|.|..
T Consensus 85 ~~Pgmv~lik~~ak~g~~eliIVSDaNsfFIe~~Lea~---------~~~d~F~~IfTNP 135 (256)
T KOG3120|consen 85 IVPGMVRLIKSAAKLGCFELIIVSDANSFFIEEILEAA---------GIHDLFSEIFTNP 135 (256)
T ss_pred CCccHHHHHHHHHhCCCceEEEEecCchhHHHHHHHHc---------cHHHHHHHHhcCC
Confidence 46999999999999995 89999999999999999984 8889999888764
No 141
>KOG2469 consensus IMP-GMP specific 5'-nucleotidase [Nucleotide transport and metabolism]
Probab=82.46 E-value=0.02 Score=60.58 Aligned_cols=241 Identities=8% Similarity=-0.138 Sum_probs=145.7
Q ss_pred CCeeEEcccccCCCccEEEEecccccccc-ccchHHHHHHHHHHHHHHhcCCCccccCCCCCCCCcccceeeecCCCeEE
Q 011157 34 PEGIYVNKNLRLDNIQVYGFDYDYTLAHY-SSNLQSLIYDLAKEHMVNEFRYPEVCISFKYDPNFPIRGLYYDKQKGCLL 112 (492)
Q Consensus 34 ~~~VF~nr~l~l~~i~~iGFDmDyTLa~Y-~~~~~~l~y~~~~~~LV~~~gYP~~ll~~~~d~~f~~RGLv~D~~~GnlL 112 (492)
+=.++++++|... +.+.+++++|++. | .+..+.+.|..--..|.. .++|-..++..+++-++.+|+.++...++..
T Consensus 40 ~Y~~~~~esLay~-~~~~~l~~~Gyp~-~ll~~~~d~~f~~rGL~ld~-~~GN~lKld~~~~vl~a~hg~rfls~~~~~e 116 (424)
T KOG2469|consen 40 RYNLPEMESLAYD-LAQFLLKDKGYPN-ELLSTSFDWNFPCRGLVLDK-ERGNLLKLDRFGYVLRAAHGTRFLSNEEISE 116 (424)
T ss_pred hhcccchHHHHHH-HHHHHHHhcCChh-hhhccccCccceeeeeEEec-cCCceeeeeccCceeeeccccccccccchhh
Confidence 4468999999999 9999999999998 5 344445555444445554 7888777788899999999999999999999
Q ss_pred EecCCCceeecccccCCCCCCHHHHHHHhCCcccccCccCCccccccccchhHHHHHHHHHHHhhhcCCCCC-hhhHHHH
Q 011157 113 KLDFFGSIEPDGCYFGRRKLSRKEIAEIYGTRHIGRDQARGLVGLMDFFCFTEACLIADIVQYFVDAKLEFD-ASYIYED 191 (492)
Q Consensus 113 Kvd~~g~I~~~~~~hG~~~ls~~ei~~~Y~~~~i~~~~~~~~~~l~dlF~lpe~~L~a~lvd~~~~~~~~~~-~~~l~~D 191 (492)
+.++++ + .-+. |.-.+. ++..+..+.--+-++.|+++....+ ....+|| ++.-++ ...++.+
T Consensus 117 iyg~~~-~-----~~~~---~~~~~l----~t~F~~~ea~~~aq~vd~~d~~~~~-~~~~~dy---k~~~~~v~~~~~~~ 179 (424)
T KOG2469|consen 117 IYGRKL-V-----RLSD---SRYYLL----NTLFSMPEADLFAQAVDFLDNGPEY-GPVDMDY---KPGWKDVRAAGNAV 179 (424)
T ss_pred hccccc-c-----cccC---chhhhh----hhhhhchhHHHHHhhcchhhcCCcc-Cccchhh---cchHHHHHHHHhHH
Confidence 988776 1 2232 222222 1111111111123344444432221 1111121 122222 4467888
Q ss_pred HHHHHHHhhhhhhhHHHHhcCccchhccchhHHHHHHHHHHcCCeEEEEeCCChHHHHHhh-hh--hhccCC--CCCCCc
Q 011157 192 VNRAIQHVHRRGLVHRGILSDPNRYLVKNGQVLQFVKMLREKGKKLFLLTNSPYYFVDGGM-RF--MLEDST--GYTDSW 266 (492)
Q Consensus 192 V~~av~~vh~~G~lk~~v~~np~kYi~k~p~l~~~L~~Lk~~GkklfL~TNS~~~y~~~vm-~~--l~~~~~--~~g~~w 266 (492)
..++.-..|..|...+.|..+ ++++- .+....-.-+...-+ +.++.|+++.-++...+ .+ .|+-.+ +..++|
T Consensus 180 h~~~~lk~~~~~~pek~V~~d-~~~v~-~l~~~r~sGKk~fl~-Tns~~~ytd~~mt~~~~~dW~~yfd~v~~~a~Kp~f 256 (424)
T KOG2469|consen 180 HLYGLLKKKMMGKPERYVVYD-GTIVP-LLSMLRDSGKKTFLH-TNSDWDYTDIFMAFHYGFDWETYFDLVETRAAKPGF 256 (424)
T ss_pred HHHHHHHHHHhcCCCceeeec-Ccccc-chHHHHhhccceEEe-eccccchhhHHHHHHhCCCcceeEEEEEEeccCCcc
Confidence 999999999999999999844 55554 444443333333343 57899999999999998 22 122111 001111
Q ss_pred C---CCccEEEEcCCCCCCCCCCCCccccccCcC
Q 011157 267 R---ELFDVVIAQANKPDFYTSDHPFRCYDTEKD 297 (492)
Q Consensus 267 ~---~yFD~iI~~a~KP~FF~~~~pfr~vd~~~g 297 (492)
- --+=-|.+.+.||.-=+...|..+.-+-+|
T Consensus 257 f~e~~vlreV~t~~g~l~~g~~~~p~e~~~~ySg 290 (424)
T KOG2469|consen 257 FHEGTVLREVEPQEGLLKNGDNTGPLEQGGVYSG 290 (424)
T ss_pred ccccceeeeeccccccccccccCCcchhcccCCc
Confidence 0 111226778888766666667766544444
No 142
>PRK03669 mannosyl-3-phosphoglycerate phosphatase; Reviewed
Probab=81.36 E-value=1.8 Score=43.20 Aligned_cols=43 Identities=16% Similarity=-0.007 Sum_probs=29.2
Q ss_pred ccCCCccEEEEeccccccccccchHHHHHHHHHHHHHHhcCCCcc
Q 011157 43 LRLDNIQVYGFDYDYTLAHYSSNLQSLIYDLAKEHMVNEFRYPEV 87 (492)
Q Consensus 43 l~l~~i~~iGFDmDyTLa~Y~~~~~~l~y~~~~~~LV~~~gYP~~ 87 (492)
|.|..+++|-+||||||..-+........ .++++|.+ .|.+--
T Consensus 2 ~~~~~~~lI~~DlDGTLL~~~~~i~~~~~-~ai~~l~~-~Gi~~v 44 (271)
T PRK03669 2 LSLQDPLLIFTDLDGTLLDSHTYDWQPAA-PWLTRLRE-AQVPVI 44 (271)
T ss_pred CCcCCCeEEEEeCccCCcCCCCcCcHHHH-HHHHHHHH-cCCeEE
Confidence 67899999999999999974322222333 33566765 677643
No 143
>TIGR02254 YjjG/YfnB HAD superfamily (subfamily IA) hydrolase, TIGR02254. This family is a member of the haloacid dehalogenase (HAD) superfamily of hydrolases which are characterized by three conserved sequence motifs. By virtue of an alpha helical domain in-between the first and second conserved motif, this family is a member of subfamily IA (TIGR01549). Most likely, these enzymes are phosphatases.
Probab=80.77 E-value=1.6 Score=41.52 Aligned_cols=18 Identities=22% Similarity=0.383 Sum_probs=16.0
Q ss_pred ccEEEEeccccccccccc
Q 011157 48 IQVYGFDYDYTLAHYSSN 65 (492)
Q Consensus 48 i~~iGFDmDyTLa~Y~~~ 65 (492)
|++|-|||||||+...+.
T Consensus 1 ~k~viFD~DGTL~d~~~~ 18 (224)
T TIGR02254 1 YKTLLFDLDDTILDFQAA 18 (224)
T ss_pred CCEEEEcCcCcccccchH
Confidence 689999999999998764
No 144
>PLN02954 phosphoserine phosphatase
Probab=79.48 E-value=1.7 Score=41.73 Aligned_cols=16 Identities=25% Similarity=0.291 Sum_probs=14.4
Q ss_pred CCccEEEEeccccccc
Q 011157 46 DNIQVYGFDYDYTLAH 61 (492)
Q Consensus 46 ~~i~~iGFDmDyTLa~ 61 (492)
..+++|-|||||||+.
T Consensus 10 ~~~k~viFDfDGTL~~ 25 (224)
T PLN02954 10 RSADAVCFDVDSTVCV 25 (224)
T ss_pred ccCCEEEEeCCCcccc
Confidence 4589999999999997
No 145
>PRK13582 thrH phosphoserine phosphatase; Provisional
Probab=79.44 E-value=1.6 Score=41.19 Aligned_cols=13 Identities=15% Similarity=0.353 Sum_probs=11.7
Q ss_pred ccEEEEecccccc
Q 011157 48 IQVYGFDYDYTLA 60 (492)
Q Consensus 48 i~~iGFDmDyTLa 60 (492)
++.|-|||||||+
T Consensus 1 ~~~v~FD~DGTL~ 13 (205)
T PRK13582 1 MEIVCLDLEGVLV 13 (205)
T ss_pred CeEEEEeCCCCCh
Confidence 4689999999999
No 146
>COG0561 Cof Predicted hydrolases of the HAD superfamily [General function prediction only]
Probab=78.55 E-value=2.2 Score=42.11 Aligned_cols=25 Identities=28% Similarity=0.373 Sum_probs=21.6
Q ss_pred HHHHHHHhCCCCCcEEEEcccccccc
Q 011157 318 LKSFLQITKWNGPEVIYFGDHLFSDL 343 (492)
Q Consensus 318 ~~~~~~~lg~~~~~vLyvGDhi~gDI 343 (492)
+..+++.+|++.++|+.|||+.-. +
T Consensus 194 l~~l~~~lgi~~~~v~afGD~~ND-~ 218 (264)
T COG0561 194 LQRLAKLLGIKLEEVIAFGDSTND-I 218 (264)
T ss_pred HHHHHHHhCCCHHHeEEeCCcccc-H
Confidence 566888999999999999999765 6
No 147
>TIGR01487 SPP-like sucrose-phosphate phosphatase-like hydrolase, Archaeal. TIGR01482, in turn, is a member of the IIB subfamily (TIGR01484) of the Haloacid Dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases.
Probab=78.20 E-value=2.4 Score=40.64 Aligned_cols=36 Identities=19% Similarity=0.231 Sum_probs=29.2
Q ss_pred HHHHHHHhCCCCCcEEEEcccccccccccccCCcEEE
Q 011157 318 LKSFLQITKWNGPEVIYFGDHLFSDLRGPSKAGWRTA 354 (492)
Q Consensus 318 ~~~~~~~lg~~~~~vLyvGDhi~gDI~~ak~~GwrT~ 354 (492)
++.+++.+|++.+++++|||+.. |+...+.+|+-.+
T Consensus 152 i~~l~~~~~i~~~~~i~iGDs~N-D~~ml~~ag~~va 187 (215)
T TIGR01487 152 VEKLKELLGIKPEEVAAIGDSEN-DIDLFRVVGFKVA 187 (215)
T ss_pred HHHHHHHhCCCHHHEEEECCCHH-HHHHHHhCCCeEE
Confidence 45688999999999999999988 6866677776533
No 148
>KOG4549 consensus Magnesium-dependent phosphatase [General function prediction only]
Probab=78.19 E-value=8.6 Score=35.10 Aligned_cols=107 Identities=13% Similarity=0.088 Sum_probs=64.9
Q ss_pred hhhhhhHHHHhcCccchhcc---chhHHHHHHHHHHcCCeEEEEeCCC-hHHHHHhhhhhhccCCCCCCCcCCCccEEEE
Q 011157 200 HRRGLVHRGILSDPNRYLVK---NGQVLQFVKMLREKGKKLFLLTNSP-YYFVDGGMRFMLEDSTGYTDSWRELFDVVIA 275 (492)
Q Consensus 200 h~~G~lk~~v~~np~kYi~k---~p~l~~~L~~Lk~~GkklfL~TNS~-~~y~~~vm~~l~~~~~~~g~~w~~yFD~iI~ 275 (492)
|.++.+|+.-. ++.+|=+. -+.++..|..||+.|.+++.+|++. .++.+.+++-+ -+-++
T Consensus 24 hl~~pfkP~k~-~~g~~g~e~~fY~Di~rIL~dLk~~GVtl~~ASRt~ap~iA~q~L~~f---------------kvk~~ 87 (144)
T KOG4549|consen 24 HLDYPFKPFKC-ECGSKGEEMIFYDDIRRILVDLKKLGVTLIHASRTMAPQIASQGLETF---------------KVKQT 87 (144)
T ss_pred ccccccccccc-CcccCcceeeeccchhHHHHHHHhcCcEEEEecCCCCHHHHHHHHHHh---------------ccCcc
Confidence 55565655433 44444332 3788999999999999999999995 56777777643 23333
Q ss_pred cCCCCCCCCCCCCccccccCcCccccccccccCCCeeeccCCHHHHHHHhCCCCCcEEEEcccccc
Q 011157 276 QANKPDFYTSDHPFRCYDTEKDTLAFTKVDAFIPNKIYYHGCLKSFLQITKWNGPEVIYFGDHLFS 341 (492)
Q Consensus 276 ~a~KP~FF~~~~pfr~vd~~~gk~~~~~~~~l~~~~vY~~G~~~~~~~~lg~~~~~vLyvGDhi~g 341 (492)
+.-||+ .+.-+|..+- .|. .-|.++++.+..+..-++..++.|.-.+
T Consensus 88 Gvlkps--~e~ft~~~~g--~gs---------------klghfke~~n~s~~~~k~~~~fdDesrn 134 (144)
T KOG4549|consen 88 GVLKPS--LEEFTFEAVG--DGS---------------KLGHFKEFTNNSNSIEKNKQVFDDESRN 134 (144)
T ss_pred cccchh--hhcCceeeec--Ccc---------------cchhHHHHhhccCcchhceeeecccccC
Confidence 444442 1111221110 011 1266677777777777888888886655
No 149
>PRK09449 dUMP phosphatase; Provisional
Probab=77.86 E-value=2 Score=41.16 Aligned_cols=16 Identities=38% Similarity=0.420 Sum_probs=14.3
Q ss_pred CccEEEEecccccccc
Q 011157 47 NIQVYGFDYDYTLAHY 62 (492)
Q Consensus 47 ~i~~iGFDmDyTLa~Y 62 (492)
.|++|.|||||||+.+
T Consensus 2 ~~k~iiFDlDGTLid~ 17 (224)
T PRK09449 2 KYDWILFDADETLFHF 17 (224)
T ss_pred CccEEEEcCCCchhcc
Confidence 4899999999999975
No 150
>TIGR01457 HAD-SF-IIA-hyp2 HAD-superfamily subfamily IIA hydrolase, TIGR01457. This hypothetical equivalog is a member of the Class IIA subfamily of the haloacid dehalogenase superfamily of aspartate-nucleophile hydrolases. The sequences modelled by this equivalog are all gram positive (low-GC) bacteria. Sequences found in this model are annotated variously as related to NagD or 4-nitrophenyl phosphatase, and this hypothetical equivalog, of all of those within the Class IIA subfamily, is most closely related to the E. coli NagD enzyme and the PGP_euk equivalog (TIGR01452). However, there is presently no evidence that this hypothetical equivalog has the same function of either those.
Probab=76.98 E-value=3.3 Score=41.11 Aligned_cols=52 Identities=12% Similarity=0.149 Sum_probs=34.3
Q ss_pred chhHHHHHHHHHHcCCeEEEEeCCChHHHHHhhhhhhccCCCCCCCcCCCccEEEEcC
Q 011157 220 NGQVLQFVKMLREKGKKLFLLTNSPYYFVDGGMRFMLEDSTGYTDSWRELFDVVIAQA 277 (492)
Q Consensus 220 ~p~l~~~L~~Lk~~GkklfL~TNS~~~y~~~vm~~l~~~~~~~g~~w~~yFD~iI~~a 277 (492)
-|+..++|++|+++|++++++||+...-...+...+- ..++..-.|-||+.+
T Consensus 19 i~~a~~~l~~l~~~g~~~~~~Tnn~~r~~~~~~~~l~------~~g~~~~~~~iit~~ 70 (249)
T TIGR01457 19 IPEAETFVHELQKRDIPYLFVTNNSTRTPESVAEMLA------SFDIPATLETVFTAS 70 (249)
T ss_pred CcCHHHHHHHHHHCCCeEEEEeCCCCCCHHHHHHHHH------HcCCCCChhhEeeHH
Confidence 4688999999999999999999954222223333321 124444567788776
No 151
>TIGR01458 HAD-SF-IIA-hyp3 HAD-superfamily subfamily IIA hydrolase, TIGR01458. This hypothetical equivalog is a member of the IIA subfamily (TIGR01460) of the haloacid dehalogenase superfamily of aspartate-nucleophile hydrolases. One sequence (GP|10716807) has been annotated as a "phospholysine phosphohistidine inorganic pyrophosphatase," probably in reference to studies on similarly described (but unsequenced) enzymes from bovine and rat tissues. However, the supporting information for this annotation has never been published.
Probab=76.40 E-value=2.9 Score=41.77 Aligned_cols=36 Identities=19% Similarity=0.035 Sum_probs=28.6
Q ss_pred cchhHHHHHHHHHHcCCeEEEEeCCChHHHHHhhhh
Q 011157 219 KNGQVLQFVKMLREKGKKLFLLTNSPYYFVDGGMRF 254 (492)
Q Consensus 219 k~p~l~~~L~~Lk~~GkklfL~TNS~~~y~~~vm~~ 254 (492)
..|+..++|++||++|++++++||++..-...+...
T Consensus 22 ~~~~a~~al~~l~~~G~~~~~~Tn~~~~~~~~~~~~ 57 (257)
T TIGR01458 22 AVPGSQEAVKRLRGASVKVRFVTNTTKESKQDLLER 57 (257)
T ss_pred cCCCHHHHHHHHHHCCCeEEEEECCCCCCHHHHHHH
Confidence 357999999999999999999999876644444333
No 152
>TIGR01116 ATPase-IIA1_Ca sarco/endoplasmic reticulum calcium-translocating P-type ATPase. The calcium P-type ATPases have been characterized as Type IIA based on a phylogenetic analysis which distinguishes this group from the Type IIB PMCA calcium pump modelled by TIGR01517. A separate analysis divides Type IIA into sub-types, SERCA and PMR1, the latter of which is modelled by TIGR01522.
Probab=74.39 E-value=6.8 Score=46.44 Aligned_cols=108 Identities=13% Similarity=0.078 Sum_probs=65.6
Q ss_pred chhHHHHHHHHHHcCCeEEEEeCCChHHHHHhhhhhhccCCCCCCCcC--CCccEEEEcCCCCCCCCCCCCccccccCcC
Q 011157 220 NGQVLQFVKMLREKGKKLFLLTNSPYYFVDGGMRFMLEDSTGYTDSWR--ELFDVVIAQANKPDFYTSDHPFRCYDTEKD 297 (492)
Q Consensus 220 ~p~l~~~L~~Lk~~GkklfL~TNS~~~y~~~vm~~l~~~~~~~g~~w~--~yFD~iI~~a~KP~FF~~~~pfr~vd~~~g 297 (492)
.|++++.+++||++|.++.++|+-+..-+..+.+.+ |.... +..+.++++.. +..++.+
T Consensus 539 r~~v~e~I~~l~~aGI~v~miTGD~~~tA~~ia~~~-------gi~~~~~~v~~~~~~g~~----------l~~~~~~-- 599 (917)
T TIGR01116 539 RPEVADAIEKCRTAGIRVIMITGDNKETAEAICRRI-------GIFSPDEDVTFKSFTGRE----------FDEMGPA-- 599 (917)
T ss_pred chhHHHHHHHHHHCCCEEEEecCCCHHHHHHHHHHc-------CCCCCCccccceeeeHHH----------HhhCCHH--
Confidence 469999999999999999999999999999888875 33211 11222333321 1100000
Q ss_pred ccccccccccCCCeeeccCCH---HHHHHHhCCCCCcEEEEcccccccccccccCCc
Q 011157 298 TLAFTKVDAFIPNKIYYHGCL---KSFLQITKWNGPEVIYFGDHLFSDLRGPSKAGW 351 (492)
Q Consensus 298 k~~~~~~~~l~~~~vY~~G~~---~~~~~~lg~~~~~vLyvGDhi~gDI~~ak~~Gw 351 (492)
.......+..||..-+- .++.+.++..|+.|+++||... |+-+-++++.
T Consensus 600 ----~~~~~~~~~~v~ar~~P~~K~~iV~~lq~~g~~va~iGDG~N-D~~alk~AdV 651 (917)
T TIGR01116 600 ----KQRAACRSAVLFSRVEPSHKSELVELLQEQGEIVAMTGDGVN-DAPALKKADI 651 (917)
T ss_pred ----HHHHhhhcCeEEEecCHHHHHHHHHHHHhcCCeEEEecCCcc-hHHHHHhCCe
Confidence 00001112345544332 2456667778899999999985 5755566655
No 153
>PRK10513 sugar phosphate phosphatase; Provisional
Probab=73.27 E-value=3.5 Score=40.71 Aligned_cols=37 Identities=24% Similarity=0.199 Sum_probs=28.4
Q ss_pred HHHHHHHhCCCCCcEEEEcccccccccccccCCcEEEEE
Q 011157 318 LKSFLQITKWNGPEVIYFGDHLFSDLRGPSKAGWRTAAI 356 (492)
Q Consensus 318 ~~~~~~~lg~~~~~vLyvGDhi~gDI~~ak~~GwrT~~V 356 (492)
++.+++.+|++.++|+.|||+.-. +---+.+|+ .+++
T Consensus 201 l~~l~~~~gi~~~~v~afGD~~ND-i~Ml~~ag~-~vAm 237 (270)
T PRK10513 201 VKSLAEHLGIKPEEVMAIGDQEND-IAMIEYAGV-GVAM 237 (270)
T ss_pred HHHHHHHhCCCHHHEEEECCchhh-HHHHHhCCc-eEEe
Confidence 677999999999999999999765 733345676 4444
No 154
>TIGR01548 HAD-SF-IA-hyp1 haloacid dehalogenase superfamily, subfamily IA hydrolase, TIGR01548. All but the Halobacterium sequence currently found are annotated as "Imidazoleglycerol-phosphate dehydratase", however, the source of the annotation could not be traced and significant homology could not be found between any of these sequences and known IGPD's.
Probab=73.06 E-value=2.9 Score=39.44 Aligned_cols=17 Identities=29% Similarity=0.286 Sum_probs=13.3
Q ss_pred cEEEEeccccccccccc
Q 011157 49 QVYGFDYDYTLAHYSSN 65 (492)
Q Consensus 49 ~~iGFDmDyTLa~Y~~~ 65 (492)
++|-|||||||+-=.+.
T Consensus 1 ~~viFD~DGTLiDs~~~ 17 (197)
T TIGR01548 1 QALVLDMDGVMADVSQS 17 (197)
T ss_pred CceEEecCceEEechHH
Confidence 46899999999965443
No 155
>PTZ00174 phosphomannomutase; Provisional
Probab=73.03 E-value=4.3 Score=40.14 Aligned_cols=37 Identities=14% Similarity=0.125 Sum_probs=25.7
Q ss_pred CccEEEEeccccccccccchHHHHHHHHHHHHHHhcCCC
Q 011157 47 NIQVYGFDYDYTLAHYSSNLQSLIYDLAKEHMVNEFRYP 85 (492)
Q Consensus 47 ~i~~iGFDmDyTLa~Y~~~~~~l~y~~~~~~LV~~~gYP 85 (492)
+++.|.|||||||+.-...+..-. ..++++|.+ .|..
T Consensus 4 ~~klia~DlDGTLL~~~~~is~~~-~~ai~~l~~-~Gi~ 40 (247)
T PTZ00174 4 KKTILLFDVDGTLTKPRNPITQEM-KDTLAKLKS-KGFK 40 (247)
T ss_pred CCeEEEEECcCCCcCCCCCCCHHH-HHHHHHHHH-CCCE
Confidence 589999999999998754444433 345566765 5654
No 156
>smart00775 LNS2 LNS2 domain. This domain is found in Saccharomyces cerevisiae protein SMP2, proteins with an N-terminal lipin domain and phosphatidylinositol transfer proteins. SMP2 is involved in plasmid maintenance and respiration. Lipin proteins are involved in adipose tissue development and insulin resistance.
Probab=72.68 E-value=6 Score=36.72 Aligned_cols=36 Identities=19% Similarity=0.338 Sum_probs=32.1
Q ss_pred chhHHHHHHHHHHcCCeEEEEeCCChHHHHHhhhhh
Q 011157 220 NGQVLQFVKMLREKGKKLFLLTNSPYYFVDGGMRFM 255 (492)
Q Consensus 220 ~p~l~~~L~~Lk~~GkklfL~TNS~~~y~~~vm~~l 255 (492)
.|++.+++++++++|.+++++|++++.-.+....++
T Consensus 29 ~~~~~~a~~~l~~~G~~ivy~TGRp~~~~~~t~~~l 64 (157)
T smart00775 29 HPGVAKLYRDIQNNGYKILYLTARPIGQADRTRSYL 64 (157)
T ss_pred CHHHHHHHHHHHHcCCeEEEEcCCcHHHHHHHHHHH
Confidence 589999999999999999999999999987666665
No 157
>TIGR01497 kdpB K+-transporting ATPase, B subunit. One sequence is apparently mis-annotated in the primary literature, but properly annotated by TIGR.
Probab=71.36 E-value=8.6 Score=44.09 Aligned_cols=35 Identities=17% Similarity=0.132 Sum_probs=33.4
Q ss_pred hhHHHHHHHHHHcCCeEEEEeCCChHHHHHhhhhh
Q 011157 221 GQVLQFVKMLREKGKKLFLLTNSPYYFVDGGMRFM 255 (492)
Q Consensus 221 p~l~~~L~~Lk~~GkklfL~TNS~~~y~~~vm~~l 255 (492)
|+.++.+++||+.|.++.++|.-+..-+..+.+.+
T Consensus 449 p~a~eaI~~l~~~Gi~v~miTGD~~~ta~~iA~~l 483 (675)
T TIGR01497 449 GGIKERFAQLRKMGIKTIMITGDNRLTAAAIAAEA 483 (675)
T ss_pred hHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHc
Confidence 79999999999999999999999999999999986
No 158
>TIGR00338 serB phosphoserine phosphatase SerB. Phosphoserine phosphatase catalyzes the reaction 3-phospho-serine + H2O = L-serine + phosphate. It catalyzes the last of three steps in the biosynthesis of serine from D-3-phosphoglycerate. Note that this enzyme acts on free phosphoserine, not on phosphoserine residues of phosphoproteins.
Probab=71.12 E-value=2.3 Score=40.56 Aligned_cols=18 Identities=33% Similarity=0.379 Sum_probs=15.8
Q ss_pred CCCccEEEEecccccccc
Q 011157 45 LDNIQVYGFDYDYTLAHY 62 (492)
Q Consensus 45 l~~i~~iGFDmDyTLa~Y 62 (492)
+..++++-|||||||+..
T Consensus 11 ~~~~k~iiFD~DGTL~~~ 28 (219)
T TIGR00338 11 LRSKKLVVFDMDSTLINA 28 (219)
T ss_pred hccCCEEEEeCcccCCCc
Confidence 566889999999999985
No 159
>COG0731 Fe-S oxidoreductases [Energy production and conversion]
Probab=69.37 E-value=8.1 Score=39.91 Aligned_cols=28 Identities=21% Similarity=0.375 Sum_probs=24.6
Q ss_pred chhHHHHHHHHHHcC-CeEEEEeCCChHH
Q 011157 220 NGQVLQFVKMLREKG-KKLFLLTNSPYYF 247 (492)
Q Consensus 220 ~p~l~~~L~~Lk~~G-kklfL~TNS~~~y 247 (492)
.|.|.++++.+|+.| +++||+||+.-.-
T Consensus 94 y~~L~elI~~~k~~g~~~tflvTNgslpd 122 (296)
T COG0731 94 YPNLGELIEEIKKRGKKTTFLVTNGSLPD 122 (296)
T ss_pred ccCHHHHHHHHHhcCCceEEEEeCCChHH
Confidence 367999999999999 7999999999833
No 160
>KOG2630 consensus Enolase-phosphatase E-1 [Amino acid transport and metabolism]
Probab=69.32 E-value=9.3 Score=38.19 Aligned_cols=111 Identities=13% Similarity=0.202 Sum_probs=74.0
Q ss_pred hhhhhhHHHHhcCccchhccchhHHHHHHHHHHcCCeEEEEeCCChHHHHHhhhhhhccCCCCCCCcCCCccEEEEcCCC
Q 011157 200 HRRGLVHRGILSDPNRYLVKNGQVLQFVKMLREKGKKLFLLTNSPYYFVDGGMRFMLEDSTGYTDSWRELFDVVIAQANK 279 (492)
Q Consensus 200 h~~G~lk~~v~~np~kYi~k~p~l~~~L~~Lk~~GkklfL~TNS~~~y~~~vm~~l~~~~~~~g~~w~~yFD~iI~~a~K 279 (492)
+.+|.||..+- +++.+.+++-+..|.++|+-|+....--..+-.| .. .-+.++|++
T Consensus 115 y~sg~lk~~v~----------aDv~~a~e~w~~~g~~vyIYSSgsv~AqKllfg~----s~--~gdl~~y~~-------- 170 (254)
T KOG2630|consen 115 YESGELKAHVY----------ADVLPAIERWSGEGVRVYIYSSGSVAAQKLLFGY----SD--AGDLRKYIS-------- 170 (254)
T ss_pred ccccccccccc----------chhHHHHHHHhhcCceEEEEcCCcHHHHHHHHcc----cC--cchHHHHhh--------
Confidence 45677776544 4588888888999999998887766655554433 21 123343332
Q ss_pred CCCCCCCCCccccccCcCccccccccccCCCeeeccCCHHHHHHHhCCCCCcEEEEcccccccccccccCCcEEEEEec
Q 011157 280 PDFYTSDHPFRCYDTEKDTLAFTKVDAFIPNKIYYHGCLKSFLQITKWNGPEVIYFGDHLFSDLRGPSKAGWRTAAIIH 358 (492)
Q Consensus 280 P~FF~~~~pfr~vd~~~gk~~~~~~~~l~~~~vY~~G~~~~~~~~lg~~~~~vLyvGDhi~gDI~~ak~~GwrT~~Vvp 358 (492)
++| |+.-|.-. ..+++....+.+|.++.++|..-|..-- ..+|+.+|..|.+++.
T Consensus 171 -gyf---------Dt~iG~K~-------------e~~sy~~I~~~Ig~s~~eiLfLTd~~~E-a~aa~~aGl~a~l~~r 225 (254)
T KOG2630|consen 171 -GYF---------DTTIGLKV-------------ESQSYKKIGHLIGKSPREILFLTDVPRE-AAAARKAGLQAGLVSR 225 (254)
T ss_pred -hhh---------hcccccee-------------hhHHHHHHHHHhCCChhheEEeccChHH-HHHHHhcccceeeeec
Confidence 112 33333110 1245667999999999999999998766 6677889999999874
No 161
>PRK10976 putative hydrolase; Provisional
Probab=68.74 E-value=5.2 Score=39.45 Aligned_cols=37 Identities=22% Similarity=0.223 Sum_probs=28.4
Q ss_pred HHHHHHHhCCCCCcEEEEcccccccccccccCCcEEEEE
Q 011157 318 LKSFLQITKWNGPEVIYFGDHLFSDLRGPSKAGWRTAAI 356 (492)
Q Consensus 318 ~~~~~~~lg~~~~~vLyvGDhi~gDI~~ak~~GwrT~~V 356 (492)
++.+++.+|+++++|+.|||+.-. +---+.+|+ .+++
T Consensus 195 l~~l~~~lgi~~~~viafGD~~ND-i~Ml~~ag~-~vAm 231 (266)
T PRK10976 195 LEAVAKKLGYSLKDCIAFGDGMND-AEMLSMAGK-GCIM 231 (266)
T ss_pred HHHHHHHcCCCHHHeEEEcCCccc-HHHHHHcCC-Ceee
Confidence 677999999999999999999765 733345676 3454
No 162
>TIGR01460 HAD-SF-IIA Haloacid Dehalogenase Superfamily Class (subfamily) IIA. Many of the genes in this subfamily have been annotated as "pNPPase" "4-nitrophenyl phosphatase" or "NPPase". These all refer to the same activity versus a common lab test compound used to determine phosphatase activity. There is no evidence that this activity is physiologically relevant.
Probab=68.65 E-value=11 Score=36.91 Aligned_cols=35 Identities=23% Similarity=0.166 Sum_probs=27.1
Q ss_pred chhHHHHHHHHHHcCCeEEEEeCCChHHHHHhhhh
Q 011157 220 NGQVLQFVKMLREKGKKLFLLTNSPYYFVDGGMRF 254 (492)
Q Consensus 220 ~p~l~~~L~~Lk~~GkklfL~TNS~~~y~~~vm~~ 254 (492)
-|+..++|..++++|++++++||+.-.-...+.+.
T Consensus 16 ~~~a~e~i~~l~~~g~~~~~~tN~~~~~~~~~~~~ 50 (236)
T TIGR01460 16 IPGAAEALNRLRAKGKPVVFLTNNSSRSEEDYAEK 50 (236)
T ss_pred CcCHHHHHHHHHHCCCeEEEEECCCCCCHHHHHHH
Confidence 46889999999999999999999874433333333
No 163
>PF06941 NT5C: 5' nucleotidase, deoxy (Pyrimidine), cytosolic type C protein (NT5C); InterPro: IPR010708 This family consists of several 5' nucleotidase, deoxy (Pyrimidine), and cytosolic type C (NT5C) proteins. 5'(3')-deoxyribonucleotidase is a ubiquitous enzyme in mammalian cells whose physiological function is not known [].; GO: 0016791 phosphatase activity; PDB: 1Z4M_A 1Q92_A 1Q91_A 1Z4J_A 1Z4I_A 1Z4Q_A 1Z4K_A 2JAW_A 1MH9_A 1Z4L_A ....
Probab=67.11 E-value=8.1 Score=36.55 Aligned_cols=30 Identities=27% Similarity=0.406 Sum_probs=22.4
Q ss_pred hccchhHHHHHHHHHHcCCeEEEEeCCChH
Q 011157 217 LVKNGQVLQFVKMLREKGKKLFLLTNSPYY 246 (492)
Q Consensus 217 i~k~p~l~~~L~~Lk~~GkklfL~TNS~~~ 246 (492)
+.+-|+..+.|++|++.|..++++|.++..
T Consensus 72 l~p~~gA~e~l~~L~~~g~~~~~Itar~~~ 101 (191)
T PF06941_consen 72 LPPIPGAVEALKKLRDKGHEIVIITARPPE 101 (191)
T ss_dssp --B-TTHHHHHHHHHTSTTEEEEEEE-SSS
T ss_pred CCccHHHHHHHHHHHHcCCcEEEEEecCcc
Confidence 446789999999999999777878777765
No 164
>TIGR01684 viral_ppase viral phosphatase. These proteins also include an N-terminal domain (ca. 125 aas) that is unique to this clade.
Probab=67.07 E-value=6.7 Score=40.55 Aligned_cols=48 Identities=23% Similarity=0.187 Sum_probs=32.9
Q ss_pred ccccCCCccEEEEeccccccccccc--hH-HHHHHHHHHHHHHhcCCCccccC
Q 011157 41 KNLRLDNIQVYGFDYDYTLAHYSSN--LQ-SLIYDLAKEHMVNEFRYPEVCIS 90 (492)
Q Consensus 41 r~l~l~~i~~iGFDmDyTLa~Y~~~--~~-~l~y~~~~~~LV~~~gYP~~ll~ 90 (492)
.++-.+-.++|.||||+||..-... .. .-+.+ +++.|.+ .|++-.|..
T Consensus 119 ~~~~~~~~kvIvFDLDgTLi~~~~~v~irdPgV~E-aL~~Lke-kGikLaIaT 169 (301)
T TIGR01684 119 PSKVFEPPHVVVFDLDSTLITDEEPVRIRDPRIYD-SLTELKK-RGCILVLWS 169 (301)
T ss_pred cccccccceEEEEecCCCCcCCCCccccCCHHHHH-HHHHHHH-CCCEEEEEE
Confidence 3455677889999999999988543 22 33344 4677765 798866553
No 165
>TIGR01675 plant-AP plant acid phosphatase. This model explicitly excludes the VSPs which lack the nucleophilc aspartate. The possibility exists, however, that some members of this family may, while containing all of the conserved HAD-superfamily catalytic residues, lack activity and have a function related to the function of the VSPs rather than the acid phosphatases.
Probab=64.38 E-value=12 Score=37.17 Aligned_cols=37 Identities=19% Similarity=0.204 Sum_probs=30.2
Q ss_pred cchhHHHHHHHHHHcCCeEEEEeCCChHHHHHhhhhh
Q 011157 219 KNGQVLQFVKMLREKGKKLFLLTNSPYYFVDGGMRFM 255 (492)
Q Consensus 219 k~p~l~~~L~~Lk~~GkklfL~TNS~~~y~~~vm~~l 255 (492)
.-|+...+++.+++.|.++|++||-+...-+.....|
T Consensus 121 aip~al~l~~~l~~~G~~Vf~lTGR~e~~r~~T~~nL 157 (229)
T TIGR01675 121 ALPEGLKLYQKIIELGIKIFLLSGRWEELRNATLDNL 157 (229)
T ss_pred CCHHHHHHHHHHHHCCCEEEEEcCCChHHHHHHHHHH
Confidence 3478899999999999999999999987755555544
No 166
>TIGR01428 HAD_type_II 2-haloalkanoic acid dehalogenase, type II. Note that the Type I HAD enzymes have not yet been fully characterized, but clearly utilize a substantially different catalytic mechanism and are thus unlikely to be related.
Probab=64.28 E-value=3.6 Score=38.62 Aligned_cols=17 Identities=35% Similarity=0.229 Sum_probs=14.9
Q ss_pred ccEEEEecccccccccc
Q 011157 48 IQVYGFDYDYTLAHYSS 64 (492)
Q Consensus 48 i~~iGFDmDyTLa~Y~~ 64 (492)
|++|-||||+||+...+
T Consensus 1 ik~viFD~dgTLiD~~~ 17 (198)
T TIGR01428 1 IKALVFDVYGTLFDVHS 17 (198)
T ss_pred CcEEEEeCCCcCccHHH
Confidence 57899999999998864
No 167
>TIGR01491 HAD-SF-IB-PSPlk HAD-superfamily, subfamily-IB PSPase-like hydrolase, archaeal. This hypothetical equivalog is a member of the IB subfamily (TIGR01488) of the haloacid dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. The sequences modelled by this alignment are all from archaeal species. The phylogenetically closest group of sequences to these are phosphoserine phosphatases (TIGR00338). There are no known archaeal phosphoserine phosphatases, and no archaea fall within TIGR00338. It is likely, then, that This model represents the archaeal branch of the PSPase equivalog.
Probab=64.19 E-value=5.6 Score=37.03 Aligned_cols=19 Identities=37% Similarity=0.359 Sum_probs=15.8
Q ss_pred CccEEEEeccccccccccc
Q 011157 47 NIQVYGFDYDYTLAHYSSN 65 (492)
Q Consensus 47 ~i~~iGFDmDyTLa~Y~~~ 65 (492)
-|+.|-||+||||+.-...
T Consensus 3 ~~k~viFD~DGTLid~~~~ 21 (201)
T TIGR01491 3 MIKLIIFDLDGTLTDVMSS 21 (201)
T ss_pred cceEEEEeCCCCCcCCccH
Confidence 3789999999999987544
No 168
>PHA03398 viral phosphatase superfamily protein; Provisional
Probab=63.85 E-value=7.2 Score=40.38 Aligned_cols=46 Identities=22% Similarity=0.213 Sum_probs=31.7
Q ss_pred cccCCCccEEEEeccccccccccch---HHHHHHHHHHHHHHhcCCCcccc
Q 011157 42 NLRLDNIQVYGFDYDYTLAHYSSNL---QSLIYDLAKEHMVNEFRYPEVCI 89 (492)
Q Consensus 42 ~l~l~~i~~iGFDmDyTLa~Y~~~~---~~l~y~~~~~~LV~~~gYP~~ll 89 (492)
++-.+-.++|+||||+||..=.... ..-+++. ++.|.+ .|++-.+.
T Consensus 122 ~~~~~~~~~i~~D~D~TL~~~~~~v~irdp~V~Et-L~eLke-kGikLaIv 170 (303)
T PHA03398 122 SLVWEIPHVIVFDLDSTLITDEEPVRIRDPFVYDS-LDELKE-RGCVLVLW 170 (303)
T ss_pred eeEeeeccEEEEecCCCccCCCCccccCChhHHHH-HHHHHH-CCCEEEEE
Confidence 3445667899999999999885443 2445664 566764 78886544
No 169
>TIGR02247 HAD-1A3-hyp Epoxide hydrolase N-terminal domain-like phosphatase. These appear to be members of the haloacid dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases by general homology and the conservation of all of the recognized catalytic motifs (although the first motif is unusual in the replacement of the more common aspartate with glycine...). The variable domain is found in between motifs 1 and 2, indicating membership in subfamily I and phylogeny and prediction of the alpha helical nature of the variable domain (by PSI-PRED) indicate membership in subfamily IA.
Probab=63.23 E-value=4 Score=38.76 Aligned_cols=16 Identities=25% Similarity=0.274 Sum_probs=14.4
Q ss_pred ccEEEEeccccccccc
Q 011157 48 IQVYGFDYDYTLAHYS 63 (492)
Q Consensus 48 i~~iGFDmDyTLa~Y~ 63 (492)
|++|-|||||||+.+.
T Consensus 2 ik~viFDldGtL~d~~ 17 (211)
T TIGR02247 2 IKAVIFDFGGVLLPSP 17 (211)
T ss_pred ceEEEEecCCceecCH
Confidence 6899999999999974
No 170
>KOG2882 consensus p-Nitrophenyl phosphatase [Inorganic ion transport and metabolism]
Probab=62.39 E-value=7 Score=40.38 Aligned_cols=32 Identities=16% Similarity=0.207 Sum_probs=26.6
Q ss_pred cchhHHHHHHHHHHcCCeEEEEeCCChHHHHH
Q 011157 219 KNGQVLQFVKMLREKGKKLFLLTNSPYYFVDG 250 (492)
Q Consensus 219 k~p~l~~~L~~Lk~~GkklfL~TNS~~~y~~~ 250 (492)
.-|+.+++|..|++.||+++++||++..--..
T Consensus 39 ~ipGs~e~l~~L~~~gK~i~fvTNNStksr~~ 70 (306)
T KOG2882|consen 39 PIPGSPEALNLLKSLGKQIIFVTNNSTKSREQ 70 (306)
T ss_pred CCCChHHHHHHHHHcCCcEEEEeCCCcchHHH
Confidence 45899999999999999999999987543333
No 171
>PRK15126 thiamin pyrimidine pyrophosphate hydrolase; Provisional
Probab=60.70 E-value=9.2 Score=37.95 Aligned_cols=37 Identities=16% Similarity=0.126 Sum_probs=27.9
Q ss_pred HHHHHHHhCCCCCcEEEEcccccccccccccCCcEEEEE
Q 011157 318 LKSFLQITKWNGPEVIYFGDHLFSDLRGPSKAGWRTAAI 356 (492)
Q Consensus 318 ~~~~~~~lg~~~~~vLyvGDhi~gDI~~ak~~GwrT~~V 356 (492)
++.+++.+|++.++|+.|||+.-. +---+.+|+ .+++
T Consensus 193 l~~l~~~~gi~~~~v~afGD~~ND-i~Ml~~ag~-~vAm 229 (272)
T PRK15126 193 LAVLSQHLGLSLADCMAFGDAMND-REMLGSVGR-GFIM 229 (272)
T ss_pred HHHHHHHhCCCHHHeEEecCCHHH-HHHHHHcCC-ceec
Confidence 677999999999999999999765 632234564 4555
No 172
>COG2217 ZntA Cation transport ATPase [Inorganic ion transport and metabolism]
Probab=59.96 E-value=15 Score=42.54 Aligned_cols=35 Identities=14% Similarity=0.155 Sum_probs=32.8
Q ss_pred hhHHHHHHHHHHcCCeEEEEeCCChHHHHHhhhhh
Q 011157 221 GQVLQFVKMLREKGKKLFLLTNSPYYFVDGGMRFM 255 (492)
Q Consensus 221 p~l~~~L~~Lk~~GkklfL~TNS~~~y~~~vm~~l 255 (492)
|+.++.+++||+.|+++.++|.=+..-++.+-+.+
T Consensus 540 ~~a~~aI~~L~~~Gi~~~mLTGDn~~~A~~iA~~l 574 (713)
T COG2217 540 PDAKEAIAALKALGIKVVMLTGDNRRTAEAIAKEL 574 (713)
T ss_pred hhHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHc
Confidence 67888999999999999999999999999999986
No 173
>PF08645 PNK3P: Polynucleotide kinase 3 phosphatase; InterPro: IPR013954 Polynucleotide kinase 3 phosphatases play a role in the repair of single breaks in DNA induced by DNA-damaging agents such as gamma radiation and camptothecin []. ; PDB: 2FPW_A 2FPR_A 2FPX_A 2FPS_A 2FPU_B 3ZVM_A 1YJ5_A 3ZVL_A 3U7E_B 3U7G_A ....
Probab=59.77 E-value=5 Score=37.33 Aligned_cols=16 Identities=38% Similarity=0.341 Sum_probs=11.8
Q ss_pred cEEEEecccccccccc
Q 011157 49 QVYGFDYDYTLAHYSS 64 (492)
Q Consensus 49 ~~iGFDmDyTLa~Y~~ 64 (492)
++.+||+||||+.-++
T Consensus 1 Kia~fD~DgTLi~~~s 16 (159)
T PF08645_consen 1 KIAFFDLDGTLIKTKS 16 (159)
T ss_dssp SEEEE-SCTTTEE-ST
T ss_pred CEEEEeCCCCccCCCC
Confidence 5789999999998864
No 174
>TIGR01689 EcbF-BcbF capsule biosynthesis phosphatase. Due to the likelihood that the substrates of these enzymes are different depending on the nature of the particular polysaccharides associated with each species, this model has been classified as a subfamily despite the close homology.
Probab=59.74 E-value=5.2 Score=36.10 Aligned_cols=15 Identities=20% Similarity=0.182 Sum_probs=13.2
Q ss_pred cEEEEeccccccccc
Q 011157 49 QVYGFDYDYTLAHYS 63 (492)
Q Consensus 49 ~~iGFDmDyTLa~Y~ 63 (492)
++|.|||||||+...
T Consensus 2 K~i~~DiDGTL~~~~ 16 (126)
T TIGR01689 2 KRLVMDLDNTITLTE 16 (126)
T ss_pred CEEEEeCCCCcccCC
Confidence 689999999998764
No 175
>PRK14010 potassium-transporting ATPase subunit B; Provisional
Probab=59.71 E-value=15 Score=42.21 Aligned_cols=36 Identities=14% Similarity=0.083 Sum_probs=33.7
Q ss_pred chhHHHHHHHHHHcCCeEEEEeCCChHHHHHhhhhh
Q 011157 220 NGQVLQFVKMLREKGKKLFLLTNSPYYFVDGGMRFM 255 (492)
Q Consensus 220 ~p~l~~~L~~Lk~~GkklfL~TNS~~~y~~~vm~~l 255 (492)
.|+.++.+++||+.|+++.++|+=+..-+..+.+.+
T Consensus 443 R~~a~e~I~~Lr~~GI~vvMiTGDn~~TA~aIA~el 478 (673)
T PRK14010 443 KDGLVERFRELREMGIETVMCTGDNELTAATIAKEA 478 (673)
T ss_pred cHHHHHHHHHHHHCCCeEEEECCCCHHHHHHHHHHc
Confidence 379999999999999999999999999999999886
No 176
>PLN02423 phosphomannomutase
Probab=58.32 E-value=9.2 Score=37.93 Aligned_cols=36 Identities=19% Similarity=0.117 Sum_probs=24.0
Q ss_pred HHHHhCCCCCcEEEEccc---ccccccccccCCcEEEEEe
Q 011157 321 FLQITKWNGPEVIYFGDH---LFSDLRGPSKAGWRTAAII 357 (492)
Q Consensus 321 ~~~~lg~~~~~vLyvGDh---i~gDI~~ak~~GwrT~~Vv 357 (492)
+++.+. ++++|+.|||+ =+.|+---+.-|--++.|.
T Consensus 193 al~~L~-~~~e~~aFGD~~~~~~ND~eMl~~~~~~~~~~~ 231 (245)
T PLN02423 193 CLQFLE-DFDEIHFFGDKTYEGGNDHEIFESERTIGHTVT 231 (245)
T ss_pred HHHHhc-CcCeEEEEeccCCCCCCcHHHHhCCCcceEEeC
Confidence 444444 89999999998 7777722223476667663
No 177
>TIGR02463 MPGP_rel mannosyl-3-phosphoglycerate phosphatase-related protein. This family consists of members of the HAD superfamily, subfamily IIB. All members are closely related to mannosyl-3-phosphoglycerate phosphatase, the second enzyme in a two-step pathway for biosynthesis of mannosylglycerate, a compatible solute present in some thermophiles and in Dehalococcoides ethenogenes. However, members of this family are separable in a neighbor-joining tree constructed from a multiple sequence alignment and are found only in mesophiles that lack the companion mannosyl-3-phosphoglycerate synthase (TIGR02460). Members of this family are like to act on a compound related to yet distinct from mannosyl-3-phosphoglycerate.
Probab=58.11 E-value=16 Score=34.95 Aligned_cols=34 Identities=18% Similarity=0.153 Sum_probs=31.3
Q ss_pred hHHHHHHHHHHcCCeEEEEeCCChHHHHHhhhhh
Q 011157 222 QVLQFVKMLREKGKKLFLLTNSPYYFVDGGMRFM 255 (492)
Q Consensus 222 ~l~~~L~~Lk~~GkklfL~TNS~~~y~~~vm~~l 255 (492)
...++|++|+++|++++++||-+...+..+++.+
T Consensus 20 ~~~~~l~~l~~~gi~~~i~TgR~~~~~~~~~~~l 53 (221)
T TIGR02463 20 PAAPWLTRLQEAGIPVILCTSKTAAEVEYLQKAL 53 (221)
T ss_pred HHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHc
Confidence 4789999999999999999999999999988875
No 178
>PRK10513 sugar phosphate phosphatase; Provisional
Probab=57.46 E-value=27 Score=34.44 Aligned_cols=36 Identities=28% Similarity=0.313 Sum_probs=31.8
Q ss_pred chhHHHHHHHHHHcCCeEEEEeCCChHHHHHhhhhh
Q 011157 220 NGQVLQFVKMLREKGKKLFLLTNSPYYFVDGGMRFM 255 (492)
Q Consensus 220 ~p~l~~~L~~Lk~~GkklfL~TNS~~~y~~~vm~~l 255 (492)
.|...+.|++++++|.+++++|+-++..+..++..+
T Consensus 22 ~~~~~~ai~~l~~~G~~~~iaTGR~~~~~~~~~~~l 57 (270)
T PRK10513 22 SPAVKQAIAAARAKGVNVVLTTGRPYAGVHRYLKEL 57 (270)
T ss_pred CHHHHHHHHHHHHCCCEEEEecCCChHHHHHHHHHh
Confidence 467889999999999999999999999888877654
No 179
>PRK00192 mannosyl-3-phosphoglycerate phosphatase; Reviewed
Probab=57.28 E-value=23 Score=35.34 Aligned_cols=35 Identities=20% Similarity=0.086 Sum_probs=31.7
Q ss_pred hhHHHHHHHHHHcCCeEEEEeCCChHHHHHhhhhh
Q 011157 221 GQVLQFVKMLREKGKKLFLLTNSPYYFVDGGMRFM 255 (492)
Q Consensus 221 p~l~~~L~~Lk~~GkklfL~TNS~~~y~~~vm~~l 255 (492)
|...++|++|++.|.+++++||.+...+...+..+
T Consensus 24 ~~~~~ai~~l~~~Gi~~~iaTgR~~~~~~~~~~~l 58 (273)
T PRK00192 24 EPAKPALKALKEKGIPVIPCTSKTAAEVEVLRKEL 58 (273)
T ss_pred HHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHc
Confidence 56889999999999999999999999999888764
No 180
>TIGR01484 HAD-SF-IIB HAD-superfamily hydrolase, subfamily IIB. The IIB subfamily consists of Trehalose-6-phosphatase (TIGR00685), plant and cyanobacterial Sucrose-phosphatase and a closely related group of bacterial and archaeal sequences, eukaryotic phosphomannomutase (pfam03332), a large subfamily ("Cof-like hydrolases", TIGR00099) containing many closely related bacterial sequences, a hypothetical equivalog containing the E. coli YedP protein, as well as two small clusters containing sequences whose relationship to the other groups is unclear.
Probab=57.18 E-value=17 Score=34.19 Aligned_cols=36 Identities=19% Similarity=0.265 Sum_probs=32.7
Q ss_pred cchhHHHHHHHHHHcCCeEEEEeCCChHHHHHhhhh
Q 011157 219 KNGQVLQFVKMLREKGKKLFLLTNSPYYFVDGGMRF 254 (492)
Q Consensus 219 k~p~l~~~L~~Lk~~GkklfL~TNS~~~y~~~vm~~ 254 (492)
..|.+.++|++|++.|.+++++|+.+...+...+..
T Consensus 18 ~~~~~~~~l~~l~~~g~~~~i~TGR~~~~~~~~~~~ 53 (204)
T TIGR01484 18 LSPETIEALERLREAGVKVVLVTGRSLAEIKELLKQ 53 (204)
T ss_pred CCHHHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHh
Confidence 468899999999999999999999999999987765
No 181
>TIGR01482 SPP-subfamily Sucrose-phosphate phosphatase subfamily. catalyze the same reaction as SPP.
Probab=57.18 E-value=7.2 Score=37.18 Aligned_cols=37 Identities=19% Similarity=0.211 Sum_probs=29.8
Q ss_pred HHHHHHHhCCCCCcEEEEcccccccccccccCCcEEEEE
Q 011157 318 LKSFLQITKWNGPEVIYFGDHLFSDLRGPSKAGWRTAAI 356 (492)
Q Consensus 318 ~~~~~~~lg~~~~~vLyvGDhi~gDI~~ak~~GwrT~~V 356 (492)
+..+++.+|+++++|++|||+ ..|+...+.+|+- +++
T Consensus 154 i~~l~~~~~i~~~~~i~~GD~-~NDi~m~~~ag~~-vam 190 (225)
T TIGR01482 154 VKKLKEKLGIKPGETLVCGDS-ENDIDLFEVPGFG-VAV 190 (225)
T ss_pred HHHHHHHhCCCHHHEEEECCC-HhhHHHHHhcCce-EEc
Confidence 566889999999999999998 5568767778885 444
No 182
>PF00702 Hydrolase: haloacid dehalogenase-like hydrolase; InterPro: IPR005834 This group of hydrolase enzymes is structurally different from the alpha/beta hydrolase family (abhydrolase). This group includes L-2-haloacid dehalogenase, epoxide hydrolases and phosphatases. The structure consists of two domains. One is an inserted four helix bundle, which is the least well conserved region of the alignment, between residues 16 and 96 of HAD1_PSESP. The rest of the fold is composed of the core alpha/beta domain.; GO: 0003824 catalytic activity, 0008152 metabolic process; PDB: 1TE2_A 3NAL_A 3NAM_A 3NAN_A 3A1D_B 3J09_A 3J08_A 2B8E_C 3A1E_A 2VOY_J ....
Probab=57.12 E-value=9.3 Score=35.64 Aligned_cols=19 Identities=26% Similarity=0.240 Sum_probs=16.5
Q ss_pred ccEEEEeccccccccccch
Q 011157 48 IQVYGFDYDYTLAHYSSNL 66 (492)
Q Consensus 48 i~~iGFDmDyTLa~Y~~~~ 66 (492)
|++|-||+||||..-+..+
T Consensus 1 i~~i~fDktGTLt~~~~~v 19 (215)
T PF00702_consen 1 IDAICFDKTGTLTQGKMSV 19 (215)
T ss_dssp ESEEEEECCTTTBESHHEE
T ss_pred CeEEEEecCCCcccCeEEE
Confidence 6899999999998887655
No 183
>TIGR01454 AHBA_synth_RP 3-amino-5-hydroxybenoic acid synthesis related protein. The most closely related enzyme below the noise cutoff is IndB which is involved in the biosynthesis of Indigoidine in Pectobacterium (Erwinia) chrysanthemi, a gamma proteobacter. This enzyme is similarly related to PGP. In this case, too it is unclear what role would be be played by a PGPase activity.
Probab=56.25 E-value=7.5 Score=36.76 Aligned_cols=15 Identities=27% Similarity=0.151 Sum_probs=11.9
Q ss_pred EEEeccccccccccc
Q 011157 51 YGFDYDYTLAHYSSN 65 (492)
Q Consensus 51 iGFDmDyTLa~Y~~~ 65 (492)
|.|||||||+--.+.
T Consensus 1 iiFDlDGTL~Ds~~~ 15 (205)
T TIGR01454 1 VVFDLDGVLVDSFAV 15 (205)
T ss_pred CeecCcCccccCHHH
Confidence 579999999986543
No 184
>PF09949 DUF2183: Uncharacterized conserved protein (DUF2183); InterPro: IPR019236 This domain, found in various bacterial and fungal proteins, has no known function.
Probab=56.20 E-value=25 Score=30.53 Aligned_cols=27 Identities=19% Similarity=0.257 Sum_probs=21.2
Q ss_pred EEEEeCCChHHHHHhhhhhhccCCCCC
Q 011157 237 LFLLTNSPYYFVDGGMRFMLEDSTGYT 263 (492)
Q Consensus 237 lfL~TNS~~~y~~~vm~~l~~~~~~~g 263 (492)
+|-+|||+|.....+.+++-....+.|
T Consensus 2 f~YvS~SPwnly~~l~~Fl~~~~~P~G 28 (100)
T PF09949_consen 2 FFYVSNSPWNLYPFLRDFLRRNGFPAG 28 (100)
T ss_pred EEEEcCCHHHHHHHHHHHHHhcCCCCC
Confidence 688999999999999999754444444
No 185
>TIGR01485 SPP_plant-cyano sucrose-6F-phosphate phosphohydrolase. Sucrose phosphate synthase (SPS), the prior step in the biosynthesis of sucrose contains a domain which exhibits considerable similarity to SPP albeit without conservation of the catalytic residues. The catalytic machinery of the synthase resides in another domain. It seems likely that the phosphatase-like domain is involved in substrate binding, possibly binding both substrates in a "product-like" orientation prior to ligation by the synthase catalytic domain.
Probab=55.57 E-value=14 Score=36.28 Aligned_cols=47 Identities=17% Similarity=0.138 Sum_probs=35.7
Q ss_pred HHHHHHHhCCCCCcEEEEcccccccccccccCCcEEEEEeccchhHHHH
Q 011157 318 LKSFLQITKWNGPEVIYFGDHLFSDLRGPSKAGWRTAAIIHELESEIRI 366 (492)
Q Consensus 318 ~~~~~~~lg~~~~~vLyvGDhi~gDI~~ak~~GwrT~~VvpEl~~Ei~~ 366 (492)
++.+++.+|++.++|++|||+.. |+-..+.+|..+++| ..-..|+..
T Consensus 172 l~~l~~~~~i~~~~~i~~GD~~N-D~~ml~~~~~~~va~-~na~~~~k~ 218 (249)
T TIGR01485 172 LQYLLQKLAMEPSQTLVCGDSGN-DIELFEIGSVRGVIV-SNAQEELLQ 218 (249)
T ss_pred HHHHHHHcCCCccCEEEEECChh-HHHHHHccCCcEEEE-CCCHHHHHH
Confidence 56688999999999999999987 685556667778877 455555443
No 186
>PF06941 NT5C: 5' nucleotidase, deoxy (Pyrimidine), cytosolic type C protein (NT5C); InterPro: IPR010708 This family consists of several 5' nucleotidase, deoxy (Pyrimidine), and cytosolic type C (NT5C) proteins. 5'(3')-deoxyribonucleotidase is a ubiquitous enzyme in mammalian cells whose physiological function is not known [].; GO: 0016791 phosphatase activity; PDB: 1Z4M_A 1Q92_A 1Q91_A 1Z4J_A 1Z4I_A 1Z4Q_A 1Z4K_A 2JAW_A 1MH9_A 1Z4L_A ....
Probab=55.19 E-value=6.6 Score=37.14 Aligned_cols=26 Identities=15% Similarity=0.152 Sum_probs=15.8
Q ss_pred EEEcccccccccccccCCcEEEEEecc
Q 011157 333 IYFGDHLFSDLRGPSKAGWRTAAIIHE 359 (492)
Q Consensus 333 LyvGDhi~gDI~~ak~~GwrT~~VvpE 359 (492)
+.|.|++.. +......||.+++.--.
T Consensus 139 vlIDD~~~n-~~~~~~~g~~~iLfd~p 164 (191)
T PF06941_consen 139 VLIDDRPHN-LEQFANAGIPVILFDQP 164 (191)
T ss_dssp EEEESSSHH-HSS-SSESSEEEEE--G
T ss_pred EEecCChHH-HHhccCCCceEEEEcCC
Confidence 557777777 55555578888777433
No 187
>PF13419 HAD_2: Haloacid dehalogenase-like hydrolase; PDB: 2FI1_A 2I6X_A 3SD7_A 4F71_A 4DFD_B 4F72_B 4DCC_A 3DDH_A 3KZX_A 2B0C_A ....
Probab=55.03 E-value=8.3 Score=34.26 Aligned_cols=14 Identities=36% Similarity=0.316 Sum_probs=12.0
Q ss_pred EEEecccccccccc
Q 011157 51 YGFDYDYTLAHYSS 64 (492)
Q Consensus 51 iGFDmDyTLa~Y~~ 64 (492)
|-||+||||+....
T Consensus 1 iifD~dgtL~d~~~ 14 (176)
T PF13419_consen 1 IIFDLDGTLVDTDP 14 (176)
T ss_dssp EEEESBTTTEEHHH
T ss_pred cEEECCCCcEeCHH
Confidence 57999999998765
No 188
>PRK01122 potassium-transporting ATPase subunit B; Provisional
Probab=54.77 E-value=18 Score=41.62 Aligned_cols=36 Identities=14% Similarity=0.031 Sum_probs=33.6
Q ss_pred chhHHHHHHHHHHcCCeEEEEeCCChHHHHHhhhhh
Q 011157 220 NGQVLQFVKMLREKGKKLFLLTNSPYYFVDGGMRFM 255 (492)
Q Consensus 220 ~p~l~~~L~~Lk~~GkklfL~TNS~~~y~~~vm~~l 255 (492)
.|++++.+++||+.|+++.++|.=+..-+..+.+.+
T Consensus 447 R~~~~eai~~Lr~~GI~vvMiTGDn~~TA~aIA~el 482 (679)
T PRK01122 447 KPGIKERFAELRKMGIKTVMITGDNPLTAAAIAAEA 482 (679)
T ss_pred chhHHHHHHHHHHCCCeEEEECCCCHHHHHHHHHHc
Confidence 379999999999999999999999999999999875
No 189
>PF00834 Ribul_P_3_epim: Ribulose-phosphate 3 epimerase family; InterPro: IPR000056 Ribulose-phosphate 3-epimerase (5.1.3.1 from EC) (also known as pentose-5-phosphate 3-epimerase or PPE) is the enzyme that converts D-ribulose 5-phosphate into D-xylulose 5-phosphate in Calvin's reductive pentose phosphate cycle. In Ralstonia eutropha (Alcaligenes eutrophus) two copies of the gene coding for PPE are known [], one is chromosomally encoded P40117 from SWISSPROT, the other one is on a plasmid Q04539 from SWISSPROT. PPE has been found in a wide range of bacteria, archaebacteria, fungi and plants. All the proteins have from 209 to 241 amino acid residues. The enzyme has a TIM barrel structure.; GO: 0004750 ribulose-phosphate 3-epimerase activity, 0005975 carbohydrate metabolic process; PDB: 3CTL_A 3CT7_D 3CU2_A 1RPX_A 3OVR_A 3OVP_A 3OVQ_B 3QC3_B 3INP_A 1TQJ_D ....
Probab=54.75 E-value=20 Score=34.80 Aligned_cols=50 Identities=18% Similarity=0.218 Sum_probs=36.5
Q ss_pred hhHHHHHHHHHHcCCeEEEEeCCChHHHHHhhhhhhccCCCCCCCcCCCccEEEEcCCCCCCC
Q 011157 221 GQVLQFVKMLREKGKKLFLLTNSPYYFVDGGMRFMLEDSTGYTDSWRELFDVVIAQANKPDFY 283 (492)
Q Consensus 221 p~l~~~L~~Lk~~GkklfL~TNS~~~y~~~vm~~l~~~~~~~g~~w~~yFD~iI~~a~KP~FF 283 (492)
+.+..+++.+|+.|+|..|+=|-....- .+ ..|.+..|.|.+-+-.|+|-
T Consensus 92 ~~~~~~i~~ik~~g~k~GialnP~T~~~-~~------------~~~l~~vD~VlvMsV~PG~~ 141 (201)
T PF00834_consen 92 EDPKETIKYIKEAGIKAGIALNPETPVE-EL------------EPYLDQVDMVLVMSVEPGFG 141 (201)
T ss_dssp TTHHHHHHHHHHTTSEEEEEE-TTS-GG-GG------------TTTGCCSSEEEEESS-TTTS
T ss_pred hCHHHHHHHHHHhCCCEEEEEECCCCch-HH------------HHHhhhcCEEEEEEecCCCC
Confidence 4567899999999999999988765432 21 35667889999999899765
No 190
>TIGR01493 HAD-SF-IA-v2 Haloacid dehalogenase superfamily, subfamily IA, variant 2 with 3rd motif like haloacid dehalogenase. The Subfamily IA and IB capping domains are predicted by PSI-PRED to consist of an alpha helical bundle. Subfamily I encompasses such a wide region of sequence space (the sequences are highly divergent) that modelling it with a single alignment is impossible, resulting in an overly broad description which allows in many unrelated sequences. Subfamily IA and IB are separated based on an aparrent phylogenetic bifurcation. Subfamily IA is still too broad to model, but cannot be further subdivided into large chunks based on phylogenetic trees. Of the three motifs defining the HAD superfamily, the third has three variant forms : (1) hhhhsDxxx(x)D, (2) hhhhssxxx(x)D and (3) hhhhDDxxx(x)s where _s_ refers to a small amino acid and _h_ to a hydrophobic one. All three of these variants are found in subfamily IA. Individual models were made based on seeds exhibiting only o
Probab=54.67 E-value=7.5 Score=35.57 Aligned_cols=16 Identities=25% Similarity=0.146 Sum_probs=13.2
Q ss_pred EEEEeccccccccccc
Q 011157 50 VYGFDYDYTLAHYSSN 65 (492)
Q Consensus 50 ~iGFDmDyTLa~Y~~~ 65 (492)
++-|||||||+-..+.
T Consensus 1 ~viFD~DGTL~D~~~~ 16 (175)
T TIGR01493 1 AMVFDVYGTLVDVHGG 16 (175)
T ss_pred CeEEecCCcCcccHHH
Confidence 4789999999987654
No 191
>smart00775 LNS2 LNS2 domain. This domain is found in Saccharomyces cerevisiae protein SMP2, proteins with an N-terminal lipin domain and phosphatidylinositol transfer proteins. SMP2 is involved in plasmid maintenance and respiration. Lipin proteins are involved in adipose tissue development and insulin resistance.
Probab=54.39 E-value=12 Score=34.81 Aligned_cols=14 Identities=21% Similarity=0.109 Sum_probs=11.9
Q ss_pred EEEEeccccccccc
Q 011157 50 VYGFDYDYTLAHYS 63 (492)
Q Consensus 50 ~iGFDmDyTLa~Y~ 63 (492)
+|.|||||||+...
T Consensus 1 iVisDIDGTL~~sd 14 (157)
T smart00775 1 IVISDIDGTITKSD 14 (157)
T ss_pred CEEEecCCCCcccc
Confidence 47899999999875
No 192
>TIGR01549 HAD-SF-IA-v1 haloacid dehalogenase superfamily, subfamily IA, variant 1 with third motif having Dx(3-4)D or Dx(3-4)E. HAD subfamilies caused by an overly broad single model.
Probab=54.31 E-value=8.8 Score=34.31 Aligned_cols=16 Identities=38% Similarity=0.229 Sum_probs=13.2
Q ss_pred EEEEeccccccccccc
Q 011157 50 VYGFDYDYTLAHYSSN 65 (492)
Q Consensus 50 ~iGFDmDyTLa~Y~~~ 65 (492)
+|-||+||||+-..+.
T Consensus 1 ~iifD~DGTL~d~~~~ 16 (154)
T TIGR01549 1 AILFDIDGTLVDSSFA 16 (154)
T ss_pred CeEecCCCcccccHHH
Confidence 3789999999997654
No 193
>TIGR02463 MPGP_rel mannosyl-3-phosphoglycerate phosphatase-related protein. This family consists of members of the HAD superfamily, subfamily IIB. All members are closely related to mannosyl-3-phosphoglycerate phosphatase, the second enzyme in a two-step pathway for biosynthesis of mannosylglycerate, a compatible solute present in some thermophiles and in Dehalococcoides ethenogenes. However, members of this family are separable in a neighbor-joining tree constructed from a multiple sequence alignment and are found only in mesophiles that lack the companion mannosyl-3-phosphoglycerate synthase (TIGR02460). Members of this family are like to act on a compound related to yet distinct from mannosyl-3-phosphoglycerate.
Probab=53.99 E-value=12 Score=35.90 Aligned_cols=36 Identities=14% Similarity=0.014 Sum_probs=28.5
Q ss_pred HHHHHHHhCCCCCcEEEEcccccccccccccCCcEEE
Q 011157 318 LKSFLQITKWNGPEVIYFGDHLFSDLRGPSKAGWRTA 354 (492)
Q Consensus 318 ~~~~~~~lg~~~~~vLyvGDhi~gDI~~ak~~GwrT~ 354 (492)
+..+++.+|+++++|++|||+.. |+---+.+|+..+
T Consensus 184 l~~l~~~lgi~~~~vi~~GD~~N-Di~ml~~ag~~va 219 (221)
T TIGR02463 184 ANWLKATYNQPDVKTLGLGDGPN-DLPLLEVADYAVV 219 (221)
T ss_pred HHHHHHHhCCCCCcEEEECCCHH-HHHHHHhCCceEE
Confidence 56789999999999999999988 5754455776543
No 194
>PRK01158 phosphoglycolate phosphatase; Provisional
Probab=53.71 E-value=8.6 Score=36.86 Aligned_cols=35 Identities=29% Similarity=0.300 Sum_probs=29.1
Q ss_pred HHHHHHHhCCCCCcEEEEcccccccccccccCCcEE
Q 011157 318 LKSFLQITKWNGPEVIYFGDHLFSDLRGPSKAGWRT 353 (492)
Q Consensus 318 ~~~~~~~lg~~~~~vLyvGDhi~gDI~~ak~~GwrT 353 (492)
+..+++.+|+++++|++|||+.. |+-..+.+|+-.
T Consensus 162 l~~l~~~~~i~~~~~i~~GD~~N-Di~m~~~ag~~v 196 (230)
T PRK01158 162 LKKLAELMGIDPEEVAAIGDSEN-DLEMFEVAGFGV 196 (230)
T ss_pred HHHHHHHhCCCHHHEEEECCchh-hHHHHHhcCceE
Confidence 56688999999999999999988 686666777753
No 195
>PF12689 Acid_PPase: Acid Phosphatase; InterPro: IPR010036 This entry represents two closely related clades of sequences from eukaryotes and archaea. The mouse enzyme has been characterised as a phosphatase and has been positively identified as a member of the haloacid dehalogenase (HAD) superfamily by site-directed mutagenesis of the active site residues [, ].; GO: 0016791 phosphatase activity; PDB: 1U7P_A 1U7O_A 2WM8_A.
Probab=53.52 E-value=6.9 Score=37.10 Aligned_cols=15 Identities=40% Similarity=0.428 Sum_probs=11.2
Q ss_pred ccEEEEecccccccc
Q 011157 48 IQVYGFDYDYTLAHY 62 (492)
Q Consensus 48 i~~iGFDmDyTLa~Y 62 (492)
-++|.||+||||--.
T Consensus 3 PklvvFDLD~TlW~~ 17 (169)
T PF12689_consen 3 PKLVVFDLDYTLWPP 17 (169)
T ss_dssp -SEEEE-STTTSSSS
T ss_pred CcEEEEcCcCCCCch
Confidence 478999999999755
No 196
>PLN02887 hydrolase family protein
Probab=52.37 E-value=15 Score=41.40 Aligned_cols=36 Identities=17% Similarity=0.006 Sum_probs=0.0
Q ss_pred CccEEEEeccccccccccchHHHHHHHHHHHHHHhcCC
Q 011157 47 NIQVYGFDYDYTLAHYSSNLQSLIYDLAKEHMVNEFRY 84 (492)
Q Consensus 47 ~i~~iGFDmDyTLa~Y~~~~~~l~y~~~~~~LV~~~gY 84 (492)
+|++|.|||||||..-......-.. .++++|.+ .|.
T Consensus 307 ~iKLIa~DLDGTLLn~d~~Is~~t~-eAI~kl~e-kGi 342 (580)
T PLN02887 307 KFSYIFCDMDGTLLNSKSQISETNA-KALKEALS-RGV 342 (580)
T ss_pred CccEEEEeCCCCCCCCCCccCHHHH-HHHHHHHH-CCC
No 197
>COG0561 Cof Predicted hydrolases of the HAD superfamily [General function prediction only]
Probab=52.21 E-value=22 Score=35.05 Aligned_cols=36 Identities=28% Similarity=0.246 Sum_probs=33.2
Q ss_pred chhHHHHHHHHHHcCCeEEEEeCCChHHHHHhhhhh
Q 011157 220 NGQVLQFVKMLREKGKKLFLLTNSPYYFVDGGMRFM 255 (492)
Q Consensus 220 ~p~l~~~L~~Lk~~GkklfL~TNS~~~y~~~vm~~l 255 (492)
.+...+.|+++++.|++++|+|+.++..+..++..+
T Consensus 22 ~~~~~~al~~~~~~g~~v~iaTGR~~~~~~~~~~~l 57 (264)
T COG0561 22 SPETKEALARLREKGVKVVLATGRPLPDVLSILEEL 57 (264)
T ss_pred CHHHHHHHHHHHHCCCEEEEECCCChHHHHHHHHHc
Confidence 467889999999999999999999999999999886
No 198
>TIGR01509 HAD-SF-IA-v3 haloacid dehalogenase superfamily, subfamily IA, variant 3 with third motif having DD or ED. HAD subfamilies caused by an overly broad single model.
Probab=51.43 E-value=5.5 Score=36.34 Aligned_cols=16 Identities=38% Similarity=0.295 Sum_probs=13.7
Q ss_pred EEEEeccccccccccc
Q 011157 50 VYGFDYDYTLAHYSSN 65 (492)
Q Consensus 50 ~iGFDmDyTLa~Y~~~ 65 (492)
++.||||+||+...+.
T Consensus 1 ~vlFDlDgtLv~~~~~ 16 (183)
T TIGR01509 1 AILFDLDGVLVDTSSA 16 (183)
T ss_pred CeeeccCCceechHHH
Confidence 4789999999999764
No 199
>TIGR02461 osmo_MPG_phos mannosyl-3-phosphoglycerate phosphatase. Members of this family are mannosyl-3-phosphoglycerate phosphatase (EC 3.1.3.70). It acts sequentially after mannosyl-3-phosphoglycerate synthase (EC 2.4.1.217) in a two-step pathway of biosynthesis of the compatible solute mannosylglycerate, a typical osmolyte of thermophiles.
Probab=50.83 E-value=15 Score=35.90 Aligned_cols=32 Identities=19% Similarity=0.136 Sum_probs=21.9
Q ss_pred HHHHHHhCC--CCCcEEEEcccccccccccccCCc
Q 011157 319 KSFLQITKW--NGPEVIYFGDHLFSDLRGPSKAGW 351 (492)
Q Consensus 319 ~~~~~~lg~--~~~~vLyvGDhi~gDI~~ak~~Gw 351 (492)
+.+++..+. ...+|++|||+... +..-+.+|.
T Consensus 187 ~~l~~~~~~~~~~~~~i~~GD~~nD-~~ml~~ag~ 220 (225)
T TIGR02461 187 KRLLDLYKLRPGAIESVGLGDSEND-FPMFEVVDL 220 (225)
T ss_pred HHHHHHhccccCcccEEEEcCCHHH-HHHHHhCCC
Confidence 446666654 67799999999765 744455555
No 200
>PRK10444 UMP phosphatase; Provisional
Probab=49.33 E-value=17 Score=36.30 Aligned_cols=35 Identities=17% Similarity=0.096 Sum_probs=23.0
Q ss_pred ccEEEEeccccccccccchHHHHHHHHHHHHHHhcCCC
Q 011157 48 IQVYGFDYDYTLAHYSSNLQSLIYDLAKEHMVNEFRYP 85 (492)
Q Consensus 48 i~~iGFDmDyTLa~Y~~~~~~l~y~~~~~~LV~~~gYP 85 (492)
|+.|-||+||||.+-...+... . .++++|.+ .|.|
T Consensus 1 ~~~v~~DlDGtL~~~~~~~p~a-~-~~l~~L~~-~g~~ 35 (248)
T PRK10444 1 IKNVICDIDGVLMHDNVAVPGA-A-EFLHRILD-KGLP 35 (248)
T ss_pred CcEEEEeCCCceEeCCeeCccH-H-HHHHHHHH-CCCe
Confidence 7899999999998885332222 2 33466654 5655
No 201
>TIGR00099 Cof-subfamily Cof subfamily of IIB subfamily of haloacid dehalogenase superfamily. The members of this subfamily are restricted almost exclusively to bacteria (one sequences from S. pombe scores above trusted, while another is between trusted and noise). It is notable that no archaea are found in this group, the closest relations to the archaea found here being two Deinococcus sequences.
Probab=48.79 E-value=28 Score=34.14 Aligned_cols=36 Identities=31% Similarity=0.381 Sum_probs=31.3
Q ss_pred chhHHHHHHHHHHcCCeEEEEeCCChHHHHHhhhhh
Q 011157 220 NGQVLQFVKMLREKGKKLFLLTNSPYYFVDGGMRFM 255 (492)
Q Consensus 220 ~p~l~~~L~~Lk~~GkklfL~TNS~~~y~~~vm~~l 255 (492)
.+...++|++|+++|.+++++|+.++..+...+..+
T Consensus 18 ~~~~~~~i~~l~~~G~~~~iaTGR~~~~~~~~~~~~ 53 (256)
T TIGR00099 18 SPSTKEALAKLREKGIKVVLATGRPYKEVKNILKEL 53 (256)
T ss_pred CHHHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHc
Confidence 467889999999999999999999998888776653
No 202
>TIGR01672 AphA HAD superfamily (subfamily IIIB) phosphatase, TIGR01672. Supporting evidence for the inclusion in the HAD superfamily, whose phosphatase members are magnesium dependent, is the inhibition by EDTA and calcium ions, and stimulation by magnesium ion.
Probab=48.61 E-value=9 Score=38.20 Aligned_cols=16 Identities=31% Similarity=0.343 Sum_probs=13.9
Q ss_pred EEEEeccccccccccc
Q 011157 50 VYGFDYDYTLAHYSSN 65 (492)
Q Consensus 50 ~iGFDmDyTLa~Y~~~ 65 (492)
+|+||||+||+-=++.
T Consensus 65 aViFDlDgTLlDSs~~ 80 (237)
T TIGR01672 65 AVSFDIDDTVLFSSPG 80 (237)
T ss_pred EEEEeCCCccccCcHH
Confidence 9999999999876655
No 203
>KOG0207 consensus Cation transport ATPase [Inorganic ion transport and metabolism]
Probab=46.96 E-value=52 Score=38.89 Aligned_cols=72 Identities=21% Similarity=0.202 Sum_probs=53.8
Q ss_pred hhHHHHHHHHHHcCCeEEEEeCCChHHHHHhhhhhhccCCCCCCCcCCCccEEEEcCCCCCCCCCCCCccccccCcCccc
Q 011157 221 GQVLQFVKMLREKGKKLFLLTNSPYYFVDGGMRFMLEDSTGYTDSWRELFDVVIAQANKPDFYTSDHPFRCYDTEKDTLA 300 (492)
Q Consensus 221 p~l~~~L~~Lk~~GkklfL~TNS~~~y~~~vm~~l~~~~~~~g~~w~~yFD~iI~~a~KP~FF~~~~pfr~vd~~~gk~~ 300 (492)
|+.......||+.|+++.++|+-++.-+..+.+.+ | +|.|.... ||. +|.
T Consensus 726 ~~a~~av~~Lk~~Gi~v~mLTGDn~~aA~svA~~V-------G------i~~V~aev-~P~---------------~K~- 775 (951)
T KOG0207|consen 726 PDAALAVAELKSMGIKVVMLTGDNDAAARSVAQQV-------G------IDNVYAEV-LPE---------------QKA- 775 (951)
T ss_pred hhHHHHHHHHHhcCceEEEEcCCCHHHHHHHHHhh-------C------cceEEecc-Cch---------------hhH-
Confidence 56667777899999999999999999999998875 4 66676666 341 111
Q ss_pred cccccccCCCeeeccCCHHHHHHHhCCCCCcEEEEcccccc
Q 011157 301 FTKVDAFIPNKIYYHGCLKSFLQITKWNGPEVIYFGDHLFS 341 (492)
Q Consensus 301 ~~~~~~l~~~~vY~~G~~~~~~~~lg~~~~~vLyvGDhi~g 341 (492)
+..+.+.-.+..|.+|||-|..
T Consensus 776 -------------------~~Ik~lq~~~~~VaMVGDGIND 797 (951)
T KOG0207|consen 776 -------------------EKIKEIQKNGGPVAMVGDGIND 797 (951)
T ss_pred -------------------HHHHHHHhcCCcEEEEeCCCCc
Confidence 1444555566889999999875
No 204
>PRK00192 mannosyl-3-phosphoglycerate phosphatase; Reviewed
Probab=46.59 E-value=16 Score=36.53 Aligned_cols=36 Identities=19% Similarity=0.177 Sum_probs=29.7
Q ss_pred HHHHHHHhCCCC-CcEEEEcccccccccccccCCcEEE
Q 011157 318 LKSFLQITKWNG-PEVIYFGDHLFSDLRGPSKAGWRTA 354 (492)
Q Consensus 318 ~~~~~~~lg~~~-~~vLyvGDhi~gDI~~ak~~GwrT~ 354 (492)
+..+++.+|+++ ++|++|||+.. |+-..+.+|+..+
T Consensus 195 l~~l~~~~~i~~~~~v~~~GDs~N-Di~m~~~ag~~va 231 (273)
T PRK00192 195 VRWLKELYRRQDGVETIALGDSPN-DLPMLEAADIAVV 231 (273)
T ss_pred HHHHHHHHhccCCceEEEEcCChh-hHHHHHhCCeeEE
Confidence 567889999999 99999999998 5866677886544
No 205
>TIGR01664 DNA-3'-Pase DNA 3'-phosphatase. The central phosphatase domain is a member of the IIIA subfamily (TIGR01662) of the haloacid dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. As is common in this superfamily, the enzyme is magnesium dependent. A difference between this enzyme and other HAD-superfamily phosphatases is in the third conserved catalytic motif which usually contains two conserved aspartate residues believed to be involved in binding the magnesium ion. Here, the second aspartate is usually replaced by an arginine residue which may indicate an interaction with the phosphate backbone of the substrate. Alternatively, there is an additional conserved aspartate downstream of the ususal site which may indicate slightly different fold in this region.
Probab=45.98 E-value=21 Score=33.34 Aligned_cols=16 Identities=38% Similarity=0.376 Sum_probs=13.9
Q ss_pred CccEEEEecccccccc
Q 011157 47 NIQVYGFDYDYTLAHY 62 (492)
Q Consensus 47 ~i~~iGFDmDyTLa~Y 62 (492)
..+++.||+||||...
T Consensus 12 ~~k~~~~D~Dgtl~~~ 27 (166)
T TIGR01664 12 QSKVAAFDLDGTLITT 27 (166)
T ss_pred cCcEEEEeCCCceEec
Confidence 5688999999999974
No 206
>PRK01158 phosphoglycolate phosphatase; Provisional
Probab=45.47 E-value=39 Score=32.26 Aligned_cols=36 Identities=11% Similarity=0.254 Sum_probs=31.7
Q ss_pred chhHHHHHHHHHHcCCeEEEEeCCChHHHHHhhhhh
Q 011157 220 NGQVLQFVKMLREKGKKLFLLTNSPYYFVDGGMRFM 255 (492)
Q Consensus 220 ~p~l~~~L~~Lk~~GkklfL~TNS~~~y~~~vm~~l 255 (492)
.|...+.|++|++.|.+++++|+-++..+..+...+
T Consensus 22 ~~~~~~al~~l~~~G~~~~iaTGR~~~~~~~~~~~l 57 (230)
T PRK01158 22 SLKAVEAIRKAEKLGIPVILATGNVLCFARAAAKLI 57 (230)
T ss_pred CHHHHHHHHHHHHCCCEEEEEcCCchHHHHHHHHHh
Confidence 467889999999999999999999999988877654
No 207
>TIGR01482 SPP-subfamily Sucrose-phosphate phosphatase subfamily. catalyze the same reaction as SPP.
Probab=45.31 E-value=34 Score=32.50 Aligned_cols=36 Identities=17% Similarity=0.290 Sum_probs=31.1
Q ss_pred chhHHHHHHHHHHcCCeEEEEeCCChHHHHHhhhhh
Q 011157 220 NGQVLQFVKMLREKGKKLFLLTNSPYYFVDGGMRFM 255 (492)
Q Consensus 220 ~p~l~~~L~~Lk~~GkklfL~TNS~~~y~~~vm~~l 255 (492)
.|...++|++++++|.+++++|+.++..+..++..+
T Consensus 17 ~~~~~~al~~l~~~Gi~~~~aTGR~~~~~~~~~~~l 52 (225)
T TIGR01482 17 NESALEAIRKAESVGIPVVLVTGNSVQFARALAKLI 52 (225)
T ss_pred CHHHHHHHHHHHHCCCEEEEEcCCchHHHHHHHHHh
Confidence 456788999999999999999999999888877654
No 208
>TIGR01680 Veg_Stor_Prot vegetative storage protein. The proteins represented by this model are close relatives of the plant acid phosphatases (TIGR01675), are limited to members of the Phaseoleae including Glycine max (soybean) and Phaseolus vulgaris (kidney bean). These proteins are highly expressed in the leaves of repeatedly depodded plants. VSP differs most strinkingly from the acid phosphatases in the lack of the conserved nucleophilic aspartate residue in the N-terminus, thus, they should be inactive as phosphatases. This issue was confused by the publication in 1992 of an article claiming activity for the Glycine max VSP. In 1994 this assertion was refuted by the separation of the activity from the VSP.
Probab=44.88 E-value=40 Score=34.60 Aligned_cols=37 Identities=14% Similarity=-0.050 Sum_probs=30.8
Q ss_pred chhHHHHHHHHHHcCCeEEEEeCCChHHHHHhhhhhh
Q 011157 220 NGQVLQFVKMLREKGKKLFLLTNSPYYFVDGGMRFML 256 (492)
Q Consensus 220 ~p~l~~~L~~Lk~~GkklfL~TNS~~~y~~~vm~~l~ 256 (492)
-|+...+++.+++.|.++|++||-+...-+..++.|-
T Consensus 147 lp~al~ly~~l~~~G~kIf~VSgR~e~~r~aT~~NL~ 183 (275)
T TIGR01680 147 LPETLKNYNKLVSLGFKIIFLSGRLKDKQAVTEANLK 183 (275)
T ss_pred ChHHHHHHHHHHHCCCEEEEEeCCchhHHHHHHHHHH
Confidence 3688889999999999999999998776666666654
No 209
>PF08282 Hydrolase_3: haloacid dehalogenase-like hydrolase; InterPro: IPR013200 The Haloacid Dehydrogenase (HAD) superfamily includes phosphatases, phosphonatases, P-type ATPases, beta-phosphoglucomutases, phosphomannomutases, and dehalogenases, which are involved in a variety of cellular processes ranging from amino acid biosynthesis to detoxification []. This HAD domain is found in several distinct enzymes including: Phospholipid-transporting ATPase 1 (3.6.3.1 from EC), a putative lipid-flipping enzyme involved in cold tolerance in Arabidopsis [] 3-deoxy-D-manno-octulosonate (KDO) 8-phosphate phosphatase (3.1.3.45 from EC), which catalyses the final step in the biosynthesis of KDO - a component of lipopolysaccharide in Gram-negative bacteria [] Mannosyl-3-phosphoglycerate phosphatase (3.1.3.70 from EC), which hydrolyzes mannosyl-3-phosphoglycerate to form the osmolyte mannosylglycerate [] Phosphoglycolate phopshatase (3.1.3.18 from EC), which catalyses the dephosphorylation of 2-phosphoglycolate [] ; PDB: 2B30_B 3R4C_A 1XVI_B 3IJ5_B 3MMZ_C 3L7Y_A 1XPJ_C 1RLT_B 1RLM_B 2HF2_A ....
Probab=44.34 E-value=37 Score=31.98 Aligned_cols=36 Identities=25% Similarity=0.378 Sum_probs=32.4
Q ss_pred chhHHHHHHHHHHcCCeEEEEeCCChHHHHHhhhhh
Q 011157 220 NGQVLQFVKMLREKGKKLFLLTNSPYYFVDGGMRFM 255 (492)
Q Consensus 220 ~p~l~~~L~~Lk~~GkklfL~TNS~~~y~~~vm~~l 255 (492)
.|...+.|++|+++|.+++++|+-++..+..++..+
T Consensus 17 ~~~~~~al~~l~~~g~~~~i~TGR~~~~~~~~~~~~ 52 (254)
T PF08282_consen 17 SPETIEALKELQEKGIKLVIATGRSYSSIKRLLKEL 52 (254)
T ss_dssp CHHHHHHHHHHHHTTCEEEEECSSTHHHHHHHHHHT
T ss_pred CHHHHHHHHhhcccceEEEEEccCcccccccccccc
Confidence 478999999999999999999999999998888753
No 210
>TIGR01662 HAD-SF-IIIA HAD-superfamily hydrolase, subfamily IIIA. In the case of histidinol phosphatase and PNK-3'-phosphatase, this model represents a domain of a bifunctional system. In the histidinol phosphatase HisB, a C-terminal domain is an imidazoleglycerol-phosphate dehydratase which catalyzes a related step in histidine biosynthesis. In PNK-3'-phosphatase, N- and C-terminal domains constitute the polynucleotide kinase and DNA-binding components of the enzyme.
Probab=44.26 E-value=12 Score=32.69 Aligned_cols=13 Identities=31% Similarity=0.225 Sum_probs=11.7
Q ss_pred cEEEEeccccccc
Q 011157 49 QVYGFDYDYTLAH 61 (492)
Q Consensus 49 ~~iGFDmDyTLa~ 61 (492)
+++-|||||||..
T Consensus 1 k~~~~D~dgtL~~ 13 (132)
T TIGR01662 1 KGVVLDLDGTLTD 13 (132)
T ss_pred CEEEEeCCCceec
Confidence 5789999999995
No 211
>PRK08883 ribulose-phosphate 3-epimerase; Provisional
Probab=44.17 E-value=33 Score=33.74 Aligned_cols=48 Identities=17% Similarity=0.265 Sum_probs=34.4
Q ss_pred hhHHHHHHHHHHcCCeEEEEeCCCh--HHHHHhhhhhhccCCCCCCCcCCCccEEEEcCCCCCCC
Q 011157 221 GQVLQFVKMLREKGKKLFLLTNSPY--YFVDGGMRFMLEDSTGYTDSWRELFDVVIAQANKPDFY 283 (492)
Q Consensus 221 p~l~~~L~~Lk~~GkklfL~TNS~~--~y~~~vm~~l~~~~~~~g~~w~~yFD~iI~~a~KP~FF 283 (492)
+.+..+|+.+|+.|+|..|+-|-.. +.+..++ ++-|.|.+-+--|+|-
T Consensus 93 ~~~~~~l~~ik~~g~k~GlalnP~Tp~~~i~~~l---------------~~~D~vlvMtV~PGfg 142 (220)
T PRK08883 93 EHVDRTLQLIKEHGCQAGVVLNPATPLHHLEYIM---------------DKVDLILLMSVNPGFG 142 (220)
T ss_pred ccHHHHHHHHHHcCCcEEEEeCCCCCHHHHHHHH---------------HhCCeEEEEEecCCCC
Confidence 4577899999999999999988754 3333333 3457788878777664
No 212
>TIGR01487 SPP-like sucrose-phosphate phosphatase-like hydrolase, Archaeal. TIGR01482, in turn, is a member of the IIB subfamily (TIGR01484) of the Haloacid Dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases.
Probab=44.13 E-value=35 Score=32.48 Aligned_cols=36 Identities=14% Similarity=0.191 Sum_probs=31.3
Q ss_pred cchhHHHHHHHHHHcCCeEEEEeCCChHHHHHhhhh
Q 011157 219 KNGQVLQFVKMLREKGKKLFLLTNSPYYFVDGGMRF 254 (492)
Q Consensus 219 k~p~l~~~L~~Lk~~GkklfL~TNS~~~y~~~vm~~ 254 (492)
-.|...+.|++|++.|.+++++|+.++..+..+...
T Consensus 19 i~~~~~~~i~~l~~~g~~~~~~TGR~~~~~~~~~~~ 54 (215)
T TIGR01487 19 ISERAIEAIRKAEKKGIPVSLVTGNTVPFARALAVL 54 (215)
T ss_pred cCHHHHHHHHHHHHCCCEEEEEcCCcchhHHHHHHH
Confidence 346889999999999999999999999988886654
No 213
>TIGR01670 YrbI-phosphatas 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase, YrbI family. The Methanosarcina sequence is distinctive in that it is linked to an N-terminal cytidylyltransferase domain (pfam02348) and is annotated as acylneuraminate cytidylyltransferase. This may give some clue as the function of these phosphatases. Several eukaryotic sequences scoring between trusted and noise are also closely related to this function such as the CMP-N-acetylneuraminic acid synthetase from mouse, but in these cases the phosphatase domain is clearly inactive as many of the active site residues are not conserved.
Probab=43.01 E-value=12 Score=34.19 Aligned_cols=14 Identities=29% Similarity=0.337 Sum_probs=13.0
Q ss_pred ccEEEEeccccccc
Q 011157 48 IQVYGFDYDYTLAH 61 (492)
Q Consensus 48 i~~iGFDmDyTLa~ 61 (492)
|+++-||+|+||..
T Consensus 1 ~~~~~~D~Dgtl~~ 14 (154)
T TIGR01670 1 IRLLILDVDGVLTD 14 (154)
T ss_pred CeEEEEeCceeEEc
Confidence 68899999999998
No 214
>PF13344 Hydrolase_6: Haloacid dehalogenase-like hydrolase; PDB: 2HO4_B 1YV9_A 1WVI_B 3EPR_A 2P27_A 2OYC_A 2CFT_A 2P69_A 2CFS_A 2CFR_A ....
Probab=41.90 E-value=26 Score=29.96 Aligned_cols=33 Identities=18% Similarity=0.120 Sum_probs=21.2
Q ss_pred EEEeccccccccccchHHHHHHHHHHHHHHhcCCCc
Q 011157 51 YGFDYDYTLAHYSSNLQSLIYDLAKEHMVNEFRYPE 86 (492)
Q Consensus 51 iGFDmDyTLa~Y~~~~~~l~y~~~~~~LV~~~gYP~ 86 (492)
|-||+||||.+-...+..- ..++++|.+ .|.|-
T Consensus 1 ~l~D~dGvl~~g~~~ipga--~e~l~~L~~-~g~~~ 33 (101)
T PF13344_consen 1 FLFDLDGVLYNGNEPIPGA--VEALDALRE-RGKPV 33 (101)
T ss_dssp EEEESTTTSEETTEE-TTH--HHHHHHHHH-TTSEE
T ss_pred CEEeCccEeEeCCCcCcCH--HHHHHHHHH-cCCCE
Confidence 5699999999986543332 334566765 57663
No 215
>PRK03669 mannosyl-3-phosphoglycerate phosphatase; Reviewed
Probab=40.18 E-value=44 Score=33.28 Aligned_cols=47 Identities=15% Similarity=0.097 Sum_probs=37.3
Q ss_pred hhhhHHHHhcCccchhccchhHHHHHHHHHHcCCeEEEEeCCChHHHHHhhhhh
Q 011157 202 RGLVHRGILSDPNRYLVKNGQVLQFVKMLREKGKKLFLLTNSPYYFVDGGMRFM 255 (492)
Q Consensus 202 ~G~lk~~v~~np~kYi~k~p~l~~~L~~Lk~~GkklfL~TNS~~~y~~~vm~~l 255 (492)
||+|- |+.+++ .+...+.|++|+++|.+++++|+-++..+..+++.+
T Consensus 15 DGTLL-----~~~~~i--~~~~~~ai~~l~~~Gi~~viaTGR~~~~i~~~~~~l 61 (271)
T PRK03669 15 DGTLL-----DSHTYD--WQPAAPWLTRLREAQVPVILCSSKTAAEMLPLQQTL 61 (271)
T ss_pred ccCCc-----CCCCcC--cHHHHHHHHHHHHcCCeEEEEcCCCHHHHHHHHHHh
Confidence 56653 344433 356888999999999999999999999998888775
No 216
>COG0036 Rpe Pentose-5-phosphate-3-epimerase [Carbohydrate transport and metabolism]
Probab=40.09 E-value=55 Score=32.50 Aligned_cols=50 Identities=20% Similarity=0.310 Sum_probs=38.1
Q ss_pred chhHHHHHHHHHHcCCeEEEEeCC--ChHHHHHhhhhhhccCCCCCCCcCCCccEEEEcCCCCCCCC
Q 011157 220 NGQVLQFVKMLREKGKKLFLLTNS--PYYFVDGGMRFMLEDSTGYTDSWRELFDVVIAQANKPDFYT 284 (492)
Q Consensus 220 ~p~l~~~L~~Lk~~GkklfL~TNS--~~~y~~~vm~~l~~~~~~~g~~w~~yFD~iI~~a~KP~FF~ 284 (492)
.+.+...|+.+|+.|+|..|+=|- +.+.+..+|.. .|+|..-+=.|+|=+
T Consensus 95 ~~~~~r~i~~Ik~~G~kaGv~lnP~Tp~~~i~~~l~~---------------vD~VllMsVnPGfgG 146 (220)
T COG0036 95 TEHIHRTIQLIKELGVKAGLVLNPATPLEALEPVLDD---------------VDLVLLMSVNPGFGG 146 (220)
T ss_pred CcCHHHHHHHHHHcCCeEEEEECCCCCHHHHHHHHhh---------------CCEEEEEeECCCCcc
Confidence 457889999999999998888876 55566555554 478888887787653
No 217
>PRK09484 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase; Provisional
Probab=39.90 E-value=14 Score=34.78 Aligned_cols=17 Identities=24% Similarity=0.243 Sum_probs=15.0
Q ss_pred CCccEEEEecccccccc
Q 011157 46 DNIQVYGFDYDYTLAHY 62 (492)
Q Consensus 46 ~~i~~iGFDmDyTLa~Y 62 (492)
..|++|.||+|+||..-
T Consensus 19 ~~ikli~~D~Dgtl~~~ 35 (183)
T PRK09484 19 ENIRLLICDVDGVFSDG 35 (183)
T ss_pred hCceEEEEcCCeeeecC
Confidence 46999999999999974
No 218
>TIGR02245 HAD_IIID1 HAD-superfamily subfamily IIID hydrolase, TIGR02245. This family of sequences appears to belong to the Haloacid Dehalogenase (HAD) superfamily of enzymes by virtue of the presence of three catalytic domains, in this case: LLVLD(ILV)D(YH)T, I(VMG)IWS, and (DN)(VC)K(PA)Lx{15-17}T(IL)(MH)(FV)DD(IL)(GRS)(RK)N. Since this family has no large "cap" domain between motifs 1 and 2 or between 2 and 3, it is formally a "class III" HAD.
Probab=39.76 E-value=35 Score=33.16 Aligned_cols=41 Identities=7% Similarity=0.101 Sum_probs=37.1
Q ss_pred cchhccchhHHHHHHHHHHcCCeEEEEeCCChHHHHHhhhhh
Q 011157 214 NRYLVKNGQVLQFVKMLREKGKKLFLLTNSPYYFVDGGMRFM 255 (492)
Q Consensus 214 ~kYi~k~p~l~~~L~~Lk~~GkklfL~TNS~~~y~~~vm~~l 255 (492)
.-|+.+.|.+.++|+.+-+ ...+++=|.|...|++.+|+.+
T Consensus 41 ~~~~~kRP~l~eFL~~~~~-~feIvVwTAa~~~ya~~~l~~l 81 (195)
T TIGR02245 41 TGEELMRPYLHEFLTSAYE-DYDIVIWSATSMKWIEIKMTEL 81 (195)
T ss_pred CceEEeCCCHHHHHHHHHh-CCEEEEEecCCHHHHHHHHHHh
Confidence 3567899999999999987 5999999999999999999975
No 219
>COG0560 SerB Phosphoserine phosphatase [Amino acid transport and metabolism]
Probab=38.53 E-value=29 Score=33.82 Aligned_cols=16 Identities=31% Similarity=0.262 Sum_probs=13.6
Q ss_pred CCccEEEEeccccccc
Q 011157 46 DNIQVYGFDYDYTLAH 61 (492)
Q Consensus 46 ~~i~~iGFDmDyTLa~ 61 (492)
...+.+-||||+||+.
T Consensus 3 ~~~~L~vFD~D~TLi~ 18 (212)
T COG0560 3 RMKKLAVFDLDGTLIN 18 (212)
T ss_pred CccceEEEecccchhh
Confidence 3457899999999998
No 220
>TIGR00213 GmhB_yaeD D,D-heptose 1,7-bisphosphate phosphatase. This family of proteins formerly designated yaeD resembles the histidinol phosphatase domain of the bifunctional protein HisB. The member from E. coli has been characterized as D,D-heptose 1,7-bisphosphate phosphatase, GmhB, involved in inner core LPS assembly (PubMed:11751812).
Probab=38.52 E-value=31 Score=32.00 Aligned_cols=38 Identities=16% Similarity=0.059 Sum_probs=22.2
Q ss_pred cEEEEecccccccc---ccchHHH----HHHHHHHHHHHhcCCCcc
Q 011157 49 QVYGFDYDYTLAHY---SSNLQSL----IYDLAKEHMVNEFRYPEV 87 (492)
Q Consensus 49 ~~iGFDmDyTLa~Y---~~~~~~l----~y~~~~~~LV~~~gYP~~ 87 (492)
+++.||.||||+.. ....+.. .-..++++|.+ .||+--
T Consensus 2 ~~~~~D~Dgtl~~~~~~~~~~~~~~~~pgv~e~L~~Lk~-~G~~l~ 46 (176)
T TIGR00213 2 KAIFLDRDGTINIDHGYVHEIDNFEFIDGVIDALRELKK-MGYALV 46 (176)
T ss_pred CEEEEeCCCCEeCCCCCCCCHHHeEECCCHHHHHHHHHH-CCCEEE
Confidence 68899999999932 1122222 12334566654 677743
No 221
>TIGR01524 ATPase-IIIB_Mg magnesium-translocating P-type ATPase. The magnesium ATPases have been classified as type IIIB by a phylogenetic analysis.
Probab=38.46 E-value=41 Score=39.74 Aligned_cols=94 Identities=12% Similarity=0.099 Sum_probs=59.7
Q ss_pred chhHHHHHHHHHHcCCeEEEEeCCChHHHHHhhhhhhccCCCCCCCcCCCccEEEEcCCCCCCCCCCCCccccccCcCcc
Q 011157 220 NGQVLQFVKMLREKGKKLFLLTNSPYYFVDGGMRFMLEDSTGYTDSWRELFDVVIAQANKPDFYTSDHPFRCYDTEKDTL 299 (492)
Q Consensus 220 ~p~l~~~L~~Lk~~GkklfL~TNS~~~y~~~vm~~l~~~~~~~g~~w~~yFD~iI~~a~KP~FF~~~~pfr~vd~~~gk~ 299 (492)
.|+.++.+++||++|+++.++|+-+..-+..+.+.+ |.. . +-+++++. +...+.
T Consensus 517 R~~~~~aI~~l~~aGI~vvmiTGD~~~tA~aIA~~l-------GI~--~--~~v~~g~~----------l~~~~~----- 570 (867)
T TIGR01524 517 KESTKEAIAALFKNGINVKVLTGDNEIVTARICQEV-------GID--A--NDFLLGAD----------IEELSD----- 570 (867)
T ss_pred chhHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHc-------CCC--C--CCeeecHh----------hhhCCH-----
Confidence 368999999999999999999999999999988875 331 0 12444431 111110
Q ss_pred cccccc-ccCCCeeeccCCHH---HHHHHhCCCCCcEEEEcccccc
Q 011157 300 AFTKVD-AFIPNKIYYHGCLK---SFLQITKWNGPEVIYFGDHLFS 341 (492)
Q Consensus 300 ~~~~~~-~l~~~~vY~~G~~~---~~~~~lg~~~~~vLyvGDhi~g 341 (492)
.... ..++..||..=+-+ ++.+.+.-.|..|.++||-+..
T Consensus 571 --~el~~~~~~~~vfAr~~Pe~K~~iV~~lq~~G~vVam~GDGvND 614 (867)
T TIGR01524 571 --EELARELRKYHIFARLTPMQKSRIIGLLKKAGHTVGFLGDGIND 614 (867)
T ss_pred --HHHHHHhhhCeEEEECCHHHHHHHHHHHHhCCCEEEEECCCccc
Confidence 0111 12234566654432 2445555578899999999764
No 222
>TIGR01681 HAD-SF-IIIC HAD-superfamily phosphatase, subfamily IIIC. No member of this subfamily is characterized with respect to function, however the MDP-1 protein is a characterized phosphatase. All of the characterized enzymes within subfamily III are phosphatases, and all of the active site residues characteristic of HAD-superfamily phosphatases are present in subfamily IIIC.
Probab=38.45 E-value=17 Score=32.17 Aligned_cols=14 Identities=43% Similarity=0.346 Sum_probs=12.6
Q ss_pred cEEEEecccccccc
Q 011157 49 QVYGFDYDYTLAHY 62 (492)
Q Consensus 49 ~~iGFDmDyTLa~Y 62 (492)
+++.||+||||...
T Consensus 1 kli~~DlD~Tl~~~ 14 (128)
T TIGR01681 1 KVIVFDLDNTLWTG 14 (128)
T ss_pred CEEEEeCCCCCCCC
Confidence 57899999999987
No 223
>PRK12702 mannosyl-3-phosphoglycerate phosphatase; Reviewed
Probab=38.09 E-value=36 Score=35.36 Aligned_cols=37 Identities=14% Similarity=0.024 Sum_probs=24.4
Q ss_pred ccEEEEecccccccccc-chHHHHHHHHHHHHHHhcCCCcc
Q 011157 48 IQVYGFDYDYTLAHYSS-NLQSLIYDLAKEHMVNEFRYPEV 87 (492)
Q Consensus 48 i~~iGFDmDyTLa~Y~~-~~~~l~y~~~~~~LV~~~gYP~~ 87 (492)
.++|-+||||||..-.. .++. .. .++++|.+ .|.|--
T Consensus 1 ~KLIftDLDGTLLd~~~~~~~~-a~-~aL~~Lk~-~GI~vV 38 (302)
T PRK12702 1 MRLVLSSLDGSLLDLEFNSYGA-AR-QALAALER-RSIPLV 38 (302)
T ss_pred CcEEEEeCCCCCcCCCCcCCHH-HH-HHHHHHHH-CCCEEE
Confidence 36889999999998533 2333 33 34677765 687753
No 224
>TIGR02471 sucr_syn_bact_C sucrose phosphate synthase, sucrose phosphatase-like domain, bacterial. Sucrose phosphate synthase (SPS) and sucrose phosphate phosphatase (SPP) are the last two enzymes of sucrose biosynthesis. In cyanobacteria and plants, the C-terminal region of most or all versions of SPS has a domain homologous to the known SPP. This domain may serve a binding or regulatory rather than catalytic function. Sequences in this family are bacterial C-terminal regions found in all but two of the putative bacterial sucrose phosphate synthases described by TIGR02472.
Probab=37.89 E-value=33 Score=33.30 Aligned_cols=47 Identities=11% Similarity=-0.046 Sum_probs=32.6
Q ss_pred HHHHHHHhCCCCCcEEEEcccccccccccccCCcEEEEEeccchhHHHHh
Q 011157 318 LKSFLQITKWNGPEVIYFGDHLFSDLRGPSKAGWRTAAIIHELESEIRIQ 367 (492)
Q Consensus 318 ~~~~~~~lg~~~~~vLyvGDhi~gDI~~ak~~GwrT~~VvpEl~~Ei~~~ 367 (492)
++.+++.+|+++++|++|||... |+...+.+|. .++| .....|+...
T Consensus 164 l~~l~~~~g~~~~~~i~~GD~~n-D~~ml~~~~~-~iav-~na~~~~k~~ 210 (236)
T TIGR02471 164 LRYLSYRWGLPLEQILVAGDSGN-DEEMLRGLTL-GVVV-GNHDPELEGL 210 (236)
T ss_pred HHHHHHHhCCCHHHEEEEcCCcc-HHHHHcCCCc-EEEE-cCCcHHHHHh
Confidence 45688999999999999999976 6855555553 3343 4555554443
No 225
>PF13304 AAA_21: AAA domain; PDB: 3QKS_B 1US8_B 1F2U_B 1F2T_B 3QKT_A 1II8_B 3QKR_B 3QKU_A.
Probab=36.18 E-value=21 Score=32.96 Aligned_cols=38 Identities=21% Similarity=0.492 Sum_probs=29.4
Q ss_pred HHhcCccchhccc--hhHHHHHHHHHHcCCeEEEEeCCCh
Q 011157 208 GILSDPNRYLVKN--GQVLQFVKMLREKGKKLFLLTNSPY 245 (492)
Q Consensus 208 ~v~~np~kYi~k~--p~l~~~L~~Lk~~GkklfL~TNS~~ 245 (492)
-+.++||-++|+. ..+..+|..+.+.|.++++.|-|+.
T Consensus 261 lliDEpE~~LHp~~q~~l~~~l~~~~~~~~QviitTHSp~ 300 (303)
T PF13304_consen 261 LLIDEPENHLHPSWQRKLIELLKELSKKNIQVIITTHSPF 300 (303)
T ss_dssp EEEESSSTTSSHHHHHHHHHHHHHTGGGSSEEEEEES-GG
T ss_pred EEecCCcCCCCHHHHHHHHHHHHhhCccCCEEEEeCccch
Confidence 4678999999996 4677777776666789999999864
No 226
>TIGR01486 HAD-SF-IIB-MPGP mannosyl-3-phosphoglycerate phosphatase family. This small group of proteins is a member of the IIB subfamily (TIGR01484) of the Haloacid Dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. Several members of this family from thermophiles (and from Dehalococcoides ethenogenes) are now known to act as mannosyl-3-phosphoglycerate (MPG) phosphatase. In these cases, the enzyme acts after MPG synthase to make the compatible solute mannosylglycerate. We propose that other mesophilic members of this family do not act as mannosyl-3-phosphoglycerate phosphatase. A member of this family is found in Escherichia coli, which appears to lack MPG synthase. Mannosylglycerate is imported in E. coli by phosphoenolpyruvate-dependent transporter (PubMed:14645248), but it appears the phosphorylation is not on the glycerate moiety, that the phosphorylated import is degraded by an alpha-mannosidase from an adjacent gene, and that E. coli would have no pathway to obta
Probab=36.04 E-value=77 Score=31.13 Aligned_cols=34 Identities=15% Similarity=0.039 Sum_probs=30.1
Q ss_pred hHHHHHHHHHHcCCeEEEEeCCChHHHHHhhhhh
Q 011157 222 QVLQFVKMLREKGKKLFLLTNSPYYFVDGGMRFM 255 (492)
Q Consensus 222 ~l~~~L~~Lk~~GkklfL~TNS~~~y~~~vm~~l 255 (492)
...+++++|+++|.+++++|+-+...+...+..+
T Consensus 20 ~~~~~i~~l~~~g~~~~~~TgR~~~~~~~~~~~~ 53 (256)
T TIGR01486 20 PAKEVLERLQELGIPVIPCTSKTAAEVEYLRKEL 53 (256)
T ss_pred HHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHc
Confidence 4789999999999999999999999888877654
No 227
>cd05014 SIS_Kpsf KpsF-like protein. KpsF is an arabinose-5-phosphate isomerase which contains SIS (Sugar ISomerase) domains. SIS domains are found in many phosphosugar isomerases and phosphosugar binding proteins. KpsF catalyzes the reversible reaction of ribulose 5-phosphate to arabinose 5-phosphate. This is the second step in the CMP-Kdo biosynthesis pathway.
Probab=35.96 E-value=45 Score=28.80 Aligned_cols=30 Identities=17% Similarity=0.433 Sum_probs=25.0
Q ss_pred chhHHHHHHHHHHcCCeEEEEeCCChHHHH
Q 011157 220 NGQVLQFVKMLREKGKKLFLLTNSPYYFVD 249 (492)
Q Consensus 220 ~p~l~~~L~~Lk~~GkklfL~TNS~~~y~~ 249 (492)
.+++.++++.+|++|.+++.+|+++-.-..
T Consensus 60 t~~~~~~~~~a~~~g~~vi~iT~~~~s~la 89 (128)
T cd05014 60 TDELLNLLPHLKRRGAPIIAITGNPNSTLA 89 (128)
T ss_pred CHHHHHHHHHHHHCCCeEEEEeCCCCCchh
Confidence 468999999999999999999998754433
No 228
>PRK08005 epimerase; Validated
Probab=35.62 E-value=64 Score=31.69 Aligned_cols=49 Identities=16% Similarity=0.066 Sum_probs=34.6
Q ss_pred hhHHHHHHHHHHcCCeEEEEeCCC--hHHHHHhhhhhhccCCCCCCCcCCCccEEEEcCCCCCCCC
Q 011157 221 GQVLQFVKMLREKGKKLFLLTNSP--YYFVDGGMRFMLEDSTGYTDSWRELFDVVIAQANKPDFYT 284 (492)
Q Consensus 221 p~l~~~L~~Lk~~GkklfL~TNS~--~~y~~~vm~~l~~~~~~~g~~w~~yFD~iI~~a~KP~FF~ 284 (492)
+.+..+|+.+|+.|+|..|+=|-. .+.+..++. +-|.|.+-+--|+|-+
T Consensus 93 ~~~~~~l~~Ik~~G~k~GlAlnP~Tp~~~i~~~l~---------------~vD~VlvMsV~PGf~G 143 (210)
T PRK08005 93 QNPSEILADIRAIGAKAGLALNPATPLLPYRYLAL---------------QLDALMIMTSEPDGRG 143 (210)
T ss_pred cCHHHHHHHHHHcCCcEEEEECCCCCHHHHHHHHH---------------hcCEEEEEEecCCCcc
Confidence 346788999999999999988865 333333333 4467888777788763
No 229
>PRK10976 putative hydrolase; Provisional
Probab=35.25 E-value=58 Score=32.03 Aligned_cols=36 Identities=14% Similarity=0.066 Sum_probs=31.4
Q ss_pred chhHHHHHHHHHHcCCeEEEEeCCChHHHHHhhhhh
Q 011157 220 NGQVLQFVKMLREKGKKLFLLTNSPYYFVDGGMRFM 255 (492)
Q Consensus 220 ~p~l~~~L~~Lk~~GkklfL~TNS~~~y~~~vm~~l 255 (492)
.|...+.|++++++|.+++++|+-++..+..++..+
T Consensus 21 s~~~~~ai~~l~~~G~~~~iaTGR~~~~~~~~~~~l 56 (266)
T PRK10976 21 SPYAKETLKLLTARGIHFVFATGRHHVDVGQIRDNL 56 (266)
T ss_pred CHHHHHHHHHHHHCCCEEEEEcCCChHHHHHHHHhc
Confidence 467889999999999999999999999888776653
No 230
>PRK09552 mtnX 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate phosphatase; Reviewed
Probab=35.12 E-value=20 Score=34.45 Aligned_cols=15 Identities=20% Similarity=0.211 Sum_probs=13.4
Q ss_pred EEEEecccccccccc
Q 011157 50 VYGFDYDYTLAHYSS 64 (492)
Q Consensus 50 ~iGFDmDyTLa~Y~~ 64 (492)
+|.||+||||+....
T Consensus 5 ~vifDfDgTi~~~d~ 19 (219)
T PRK09552 5 QIFCDFDGTITNNDN 19 (219)
T ss_pred EEEEcCCCCCCcchh
Confidence 799999999999864
No 231
>TIGR02826 RNR_activ_nrdG3 anaerobic ribonucleoside-triphosphate reductase activating protein. Members of this family represent a set of proteins related to, yet architecturally different from, the activating protein for the glycine radical-containing, oxygen-sensitive ribonucleoside-triphosphate reductase (RNR) as described in model TIGR02491. Members of this family are found paired with members of a similarly divergent set of anaerobic ribonucleoside-triphosphate reductases. Identification of this protein as an RNR activitating protein is partly from pairing with a candidate RNR. It is further supported by our finding that upstream of these operons are examples of a conserved regulatory element (described Rodionov and Gelfand) that is found in nearly all bacteria and that occurs specifically upstream of operons for all three classes of RNR genes.
Probab=34.53 E-value=51 Score=30.36 Aligned_cols=25 Identities=32% Similarity=0.438 Sum_probs=22.1
Q ss_pred hhHHHHHHHHHHcCCeEEEEeCCCh
Q 011157 221 GQVLQFVKMLREKGKKLFLLTNSPY 245 (492)
Q Consensus 221 p~l~~~L~~Lk~~GkklfL~TNS~~ 245 (492)
+.+.++++.+|+.|.++.|-||...
T Consensus 75 ~~l~~ll~~lk~~Gl~i~l~Tg~~~ 99 (147)
T TIGR02826 75 EALLSLLKIFKEKGLKTCLYTGLEP 99 (147)
T ss_pred HHHHHHHHHHHHCCCCEEEECCCCC
Confidence 4799999999999999999999654
No 232
>PF03767 Acid_phosphat_B: HAD superfamily, subfamily IIIB (Acid phosphatase); InterPro: IPR005519 This family of class B acid phosphatases also contains a number of vegetative storage proteins (VPS25). The acid phosphatase activity of VPS has been experimentally demonstrated [].; GO: 0003993 acid phosphatase activity; PDB: 3PCT_C 2I34_A 2I33_A 1Z5U_D 1Z5G_A 2AUT_C 1Z88_B 3OCV_A 3OCZ_A 3OCX_A ....
Probab=34.52 E-value=32 Score=33.99 Aligned_cols=38 Identities=18% Similarity=0.277 Sum_probs=30.3
Q ss_pred ccchhHHHHHHHHHHcCCeEEEEeCCChHHHHHhhhhh
Q 011157 218 VKNGQVLQFVKMLREKGKKLFLLTNSPYYFVDGGMRFM 255 (492)
Q Consensus 218 ~k~p~l~~~L~~Lk~~GkklfL~TNS~~~y~~~vm~~l 255 (492)
..-|+..++++.+++.|.+||++||-+...-+..++-|
T Consensus 115 ~aip~a~~l~~~~~~~G~~V~~iT~R~~~~r~~T~~nL 152 (229)
T PF03767_consen 115 PAIPGALELYNYARSRGVKVFFITGRPESQREATEKNL 152 (229)
T ss_dssp EEETTHHHHHHHHHHTTEEEEEEEEEETTCHHHHHHHH
T ss_pred cccHHHHHHHHHHHHCCCeEEEEecCCchhHHHHHHHH
Confidence 34588999999999999999999998766555554444
No 233
>PRK10530 pyridoxal phosphate (PLP) phosphatase; Provisional
Probab=34.32 E-value=61 Score=31.72 Aligned_cols=36 Identities=17% Similarity=0.145 Sum_probs=31.0
Q ss_pred chhHHHHHHHHHHcCCeEEEEeCCChHHHHHhhhhh
Q 011157 220 NGQVLQFVKMLREKGKKLFLLTNSPYYFVDGGMRFM 255 (492)
Q Consensus 220 ~p~l~~~L~~Lk~~GkklfL~TNS~~~y~~~vm~~l 255 (492)
.|...+.|++++++|.+++|+|+-++..+...+..+
T Consensus 22 ~~~~~~ai~~~~~~G~~~~iaTGR~~~~~~~~~~~l 57 (272)
T PRK10530 22 LPESLEALARAREAGYKVIIVTGRHHVAIHPFYQAL 57 (272)
T ss_pred CHHHHHHHHHHHHCCCEEEEEcCCChHHHHHHHHhc
Confidence 467789999999999999999999998887766653
No 234
>PRK15126 thiamin pyrimidine pyrophosphate hydrolase; Provisional
Probab=34.09 E-value=62 Score=31.99 Aligned_cols=36 Identities=17% Similarity=0.132 Sum_probs=31.9
Q ss_pred chhHHHHHHHHHHcCCeEEEEeCCChHHHHHhhhhh
Q 011157 220 NGQVLQFVKMLREKGKKLFLLTNSPYYFVDGGMRFM 255 (492)
Q Consensus 220 ~p~l~~~L~~Lk~~GkklfL~TNS~~~y~~~vm~~l 255 (492)
.+...+.|++|+++|.+++++|+-++..+..++..+
T Consensus 21 ~~~~~~ai~~l~~~G~~~~iaTGR~~~~~~~~~~~l 56 (272)
T PRK15126 21 GEKTLSTLARLRERDITLTFATGRHVLEMQHILGAL 56 (272)
T ss_pred CHHHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHHc
Confidence 567889999999999999999999999988877654
No 235
>TIGR00099 Cof-subfamily Cof subfamily of IIB subfamily of haloacid dehalogenase superfamily. The members of this subfamily are restricted almost exclusively to bacteria (one sequences from S. pombe scores above trusted, while another is between trusted and noise). It is notable that no archaea are found in this group, the closest relations to the archaea found here being two Deinococcus sequences.
Probab=34.06 E-value=25 Score=34.51 Aligned_cols=34 Identities=29% Similarity=0.390 Sum_probs=28.6
Q ss_pred HHHHHHHhCCCCCcEEEEcccccccccccccCCcE
Q 011157 318 LKSFLQITKWNGPEVIYFGDHLFSDLRGPSKAGWR 352 (492)
Q Consensus 318 ~~~~~~~lg~~~~~vLyvGDhi~gDI~~ak~~Gwr 352 (492)
++.+++.+|+++++|++|||+.. |+-..+.+|+.
T Consensus 193 i~~~~~~~~~~~~~~~~~GD~~n-D~~m~~~~~~~ 226 (256)
T TIGR00099 193 LQSLAEALGISLEDVIAFGDGMN-DIEMLEAAGYG 226 (256)
T ss_pred HHHHHHHcCCCHHHEEEeCCcHH-hHHHHHhCCce
Confidence 67789999999999999999987 58666677864
No 236
>KOG1618 consensus Predicted phosphatase [General function prediction only]
Probab=33.89 E-value=59 Score=34.23 Aligned_cols=32 Identities=25% Similarity=0.501 Sum_probs=26.4
Q ss_pred CCcEEEEcccccccccccc---------------cCCcEEEEEeccc
Q 011157 329 GPEVIYFGDHLFSDLRGPS---------------KAGWRTAAIIHEL 360 (492)
Q Consensus 329 ~~~vLyvGDhi~gDI~~ak---------------~~GwrT~~VvpEl 360 (492)
.+.+-+|||+..+||+.|. ..||-.|+|.-..
T Consensus 297 ~k~lymvGDNP~sDv~GA~lf~~yap~~~~g~~~~~~w~SILV~TGV 343 (389)
T KOG1618|consen 297 IKKLYMVGDNPMSDVRGANLFHQYAPELGAGGSANYGWISILVRTGV 343 (389)
T ss_pred cceeeeecCCCcccccccccccccccccccccccCCCceEEEEeeee
Confidence 4578889999999999885 5799999996443
No 237
>TIGR02461 osmo_MPG_phos mannosyl-3-phosphoglycerate phosphatase. Members of this family are mannosyl-3-phosphoglycerate phosphatase (EC 3.1.3.70). It acts sequentially after mannosyl-3-phosphoglycerate synthase (EC 2.4.1.217) in a two-step pathway of biosynthesis of the compatible solute mannosylglycerate, a typical osmolyte of thermophiles.
Probab=33.85 E-value=66 Score=31.42 Aligned_cols=35 Identities=9% Similarity=0.068 Sum_probs=30.0
Q ss_pred hhHHHHHHHHHHcCCeEEEEeCCChHHHHHhhhhh
Q 011157 221 GQVLQFVKMLREKGKKLFLLTNSPYYFVDGGMRFM 255 (492)
Q Consensus 221 p~l~~~L~~Lk~~GkklfL~TNS~~~y~~~vm~~l 255 (492)
|+..++|++|+++|.+++++|+.+..-+...++-+
T Consensus 18 ~~~~~ai~~l~~~G~~~vi~TgR~~~~~~~~~~~l 52 (225)
T TIGR02461 18 GPAREALEELKDLGFPIVFVSSKTRAEQEYYREEL 52 (225)
T ss_pred hHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHc
Confidence 46899999999999999999999988777766553
No 238
>PRK09456 ?-D-glucose-1-phosphatase; Provisional
Probab=33.82 E-value=31 Score=32.49 Aligned_cols=16 Identities=19% Similarity=0.310 Sum_probs=13.7
Q ss_pred cEEEEecccccccccc
Q 011157 49 QVYGFDYDYTLAHYSS 64 (492)
Q Consensus 49 ~~iGFDmDyTLa~Y~~ 64 (492)
.+|-||||+||+.+.+
T Consensus 1 ~~viFDldgvL~d~~~ 16 (199)
T PRK09456 1 MLYIFDLGNVIVDIDF 16 (199)
T ss_pred CEEEEeCCCccccCcH
Confidence 3689999999999864
No 239
>TIGR02137 HSK-PSP phosphoserine phosphatase/homoserine phosphotransferase bifunctional protein. This enzyme is a member of the haloacid dehalogenase (HAD) superfamily, specifically part of subfamily IB by virtue of the presence of an alpha helical domain in between motifs I and II of the HAD domain . The closest homologs to this family are monofunctional phosphoserine phosphatases (TIGR00338).
Probab=33.63 E-value=21 Score=34.44 Aligned_cols=26 Identities=12% Similarity=-0.123 Sum_probs=18.4
Q ss_pred HHHHHHHHHHcCCeEEEEeCCChHHH
Q 011157 223 VLQFVKMLREKGKKLFLLTNSPYYFV 248 (492)
Q Consensus 223 l~~~L~~Lk~~GkklfL~TNS~~~y~ 248 (492)
=...++.+++.|.+++.+..|..|.-
T Consensus 133 K~~~l~~l~~~~~~~v~vGDs~nDl~ 158 (203)
T TIGR02137 133 KRQSVIAFKSLYYRVIAAGDSYNDTT 158 (203)
T ss_pred HHHHHHHHHhhCCCEEEEeCCHHHHH
Confidence 33456666777878888888888743
No 240
>COG0647 NagD Predicted sugar phosphatases of the HAD superfamily [Carbohydrate transport and metabolism]
Probab=33.02 E-value=27 Score=35.68 Aligned_cols=38 Identities=18% Similarity=0.189 Sum_probs=25.8
Q ss_pred CCCccEEEEeccccccccccchHHHHHHHHHHHHHHhcCCC
Q 011157 45 LDNIQVYGFDYDYTLAHYSSNLQSLIYDLAKEHMVNEFRYP 85 (492)
Q Consensus 45 l~~i~~iGFDmDyTLa~Y~~~~~~l~y~~~~~~LV~~~gYP 85 (492)
++++++|-||+||||.+-+..+..- ..++++|.+ .|-|
T Consensus 5 ~~~y~~~l~DlDGvl~~G~~~ipga--~e~l~~L~~-~g~~ 42 (269)
T COG0647 5 MDKYDGFLFDLDGVLYRGNEAIPGA--AEALKRLKA-AGKP 42 (269)
T ss_pred hhhcCEEEEcCcCceEeCCccCchH--HHHHHHHHH-cCCe
Confidence 5789999999999999997653221 223455544 5655
No 241
>PRK12702 mannosyl-3-phosphoglycerate phosphatase; Reviewed
Probab=32.92 E-value=71 Score=33.21 Aligned_cols=42 Identities=17% Similarity=0.071 Sum_probs=34.4
Q ss_pred CccchhccchhHHHHHHHHHHcCCeEEEEeCCChHHHHHhhhhh
Q 011157 212 DPNRYLVKNGQVLQFVKMLREKGKKLFLLTNSPYYFVDGGMRFM 255 (492)
Q Consensus 212 np~kYi~k~p~l~~~L~~Lk~~GkklfL~TNS~~~y~~~vm~~l 255 (492)
|...|+. +...++|++|+++|+.++++|+-...-+..+++-+
T Consensus 14 d~~~~~~--~~a~~aL~~Lk~~GI~vVlaTGRt~~ev~~l~~~L 55 (302)
T PRK12702 14 DLEFNSY--GAARQALAALERRSIPLVLYSLRTRAQLEHLCRQL 55 (302)
T ss_pred CCCCcCC--HHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHh
Confidence 4455543 45889999999999999999999999888888764
No 242
>TIGR01488 HAD-SF-IB Haloacid Dehalogenase superfamily, subfamily IB, phosphoserine phosphatase-like. Subfamily IA includes the enzyme phosphoserine phosphatase (TIGR00338) as well as three hypothetical equivalogs. Many members of these hypothetical equivalogs have been annotated as PSPase-like or PSPase-family proteins. In particular, the hypothetical equivalog which appears to be most closely related to PSPase contains only Archaea (while TIGR00338 contains only eukaryotes and bacteria) of which some are annotated as PSPases. Although this is a reasonable conjecture, none of these sequences has sufficient evidence for this assignment. If such should be found, this model should be retired while the PSPase model should be broadened to include these sequences.
Probab=32.54 E-value=28 Score=31.62 Aligned_cols=14 Identities=43% Similarity=0.465 Sum_probs=11.9
Q ss_pred EEEecccccccccc
Q 011157 51 YGFDYDYTLAHYSS 64 (492)
Q Consensus 51 iGFDmDyTLa~Y~~ 64 (492)
+-|||||||..-..
T Consensus 2 ~~fD~DgTl~~~~s 15 (177)
T TIGR01488 2 AIFDFDGTLTRQDS 15 (177)
T ss_pred EEecCccccccchh
Confidence 67999999998754
No 243
>TIGR01489 DKMTPPase-SF 2,3-diketo-5-methylthio-1-phosphopentane phosphatase. Note that SP|P53981 from S. cerevisiae, a member of this family, is annotated as a "probable membrane protein" due to a predicted transmembrane helix. The region in question contains the second of the three conserved HAD superfamily catalytic motifs and thus, considering the fold of the HAD catalytic domain, is unlikely to be a transmembrane region in fact.
Probab=32.11 E-value=26 Score=32.01 Aligned_cols=15 Identities=33% Similarity=0.268 Sum_probs=12.8
Q ss_pred EEEEecccccccccc
Q 011157 50 VYGFDYDYTLAHYSS 64 (492)
Q Consensus 50 ~iGFDmDyTLa~Y~~ 64 (492)
+|.||+|+||....+
T Consensus 3 ~iiFD~dgTL~~~~~ 17 (188)
T TIGR01489 3 VVVSDFDGTITLNDS 17 (188)
T ss_pred EEEEeCCCcccCCCc
Confidence 578999999998754
No 244
>KOG3111 consensus D-ribulose-5-phosphate 3-epimerase [Carbohydrate transport and metabolism]
Probab=31.35 E-value=63 Score=31.69 Aligned_cols=51 Identities=25% Similarity=0.281 Sum_probs=37.3
Q ss_pred hhHHHHHHHHHHcCCeEEEEeCCChHHHHHhhhhhhccCCCCCCCcCCCccEEEEcCCCCCCCC
Q 011157 221 GQVLQFVKMLREKGKKLFLLTNSPYYFVDGGMRFMLEDSTGYTDSWRELFDVVIAQANKPDFYT 284 (492)
Q Consensus 221 p~l~~~L~~Lk~~GkklfL~TNS~~~y~~~vm~~l~~~~~~~g~~w~~yFD~iI~~a~KP~FF~ 284 (492)
.+..++.+++|++|.|+-++-|-....-.. ..|.+--|.+.+-.-+|+|=.
T Consensus 99 q~~~~lv~~ir~~Gmk~G~alkPgT~Ve~~-------------~~~~~~~D~vLvMtVePGFGG 149 (224)
T KOG3111|consen 99 QKPAELVEKIREKGMKVGLALKPGTPVEDL-------------EPLAEHVDMVLVMTVEPGFGG 149 (224)
T ss_pred cCHHHHHHHHHHcCCeeeEEeCCCCcHHHH-------------HHhhccccEEEEEEecCCCch
Confidence 446788999999999999988765432221 245556688999999998753
No 245
>TIGR01484 HAD-SF-IIB HAD-superfamily hydrolase, subfamily IIB. The IIB subfamily consists of Trehalose-6-phosphatase (TIGR00685), plant and cyanobacterial Sucrose-phosphatase and a closely related group of bacterial and archaeal sequences, eukaryotic phosphomannomutase (pfam03332), a large subfamily ("Cof-like hydrolases", TIGR00099) containing many closely related bacterial sequences, a hypothetical equivalog containing the E. coli YedP protein, as well as two small clusters containing sequences whose relationship to the other groups is unclear.
Probab=31.11 E-value=27 Score=32.78 Aligned_cols=34 Identities=24% Similarity=0.207 Sum_probs=25.7
Q ss_pred HHHHHHHhCCCCCcEEEEcccccccccccccCCcE
Q 011157 318 LKSFLQITKWNGPEVIYFGDHLFSDLRGPSKAGWR 352 (492)
Q Consensus 318 ~~~~~~~lg~~~~~vLyvGDhi~gDI~~ak~~Gwr 352 (492)
+..+++.+|+++++|++|||+... +-..+.+|+.
T Consensus 168 ~~~~~~~~~~~~~~~~~~GD~~nD-~~~~~~~~~~ 201 (204)
T TIGR01484 168 LQALLKELNGKRDEILAFGDSGND-EEMFEVAGLA 201 (204)
T ss_pred HHHHHHHhCCCHHHEEEEcCCHHH-HHHHHHcCCc
Confidence 455888999999999999997654 6555556654
No 246
>KOG1605 consensus TFIIF-interacting CTD phosphatase, including NLI-interacting factor (involved in RNA polymerase II regulation) [Transcription]
Probab=30.82 E-value=10 Score=38.50 Aligned_cols=43 Identities=21% Similarity=0.233 Sum_probs=39.3
Q ss_pred CccchhccchhHHHHHHHHHHcCCeEEEEeCCChHHHHHhhhhh
Q 011157 212 DPNRYLVKNGQVLQFVKMLREKGKKLFLLTNSPYYFVDGGMRFM 255 (492)
Q Consensus 212 np~kYi~k~p~l~~~L~~Lk~~GkklfL~TNS~~~y~~~vm~~l 255 (492)
....||.+.|++-++|.++-+. ..+.+-|.|...|.+.++.+|
T Consensus 125 ~~~~yV~kRP~vdeFL~~~s~~-~e~v~FTAs~~~Ya~~v~D~L 167 (262)
T KOG1605|consen 125 IHQVYVRKRPHVDEFLSRVSKW-YELVLFTASLEVYADPLLDIL 167 (262)
T ss_pred ceEEEEEcCCCHHHHHHHhHHH-HHHHHHHhhhHHHHHHHHHHc
Confidence 6789999999999999998776 789999999999999999986
No 247
>cd05008 SIS_GlmS_GlmD_1 SIS (Sugar ISomerase) domain repeat 1 found in Glucosamine 6-phosphate synthase (GlmS) and Glucosamine-6-phosphate deaminase (GlmD). The SIS domain is found in many phosphosugar isomerases and phosphosugar binding proteins. GlmS contains a N-terminal glutaminase domain and two C-terminal SIS domains and catalyzes the first step in hexosamine metabolism, converting fructose 6-phosphate into glucosamine 6-phosphate using glutamine as nitrogen source. The glutaminase domain hydrolyzes glutamine to glutamate and ammonia. Ammonia is transferred through a channel to the isomerase domain for glucosamine 6-phosphate synthesis. The end product of the pathway is N-acetylglucosamine, which plays multiple roles in eukaryotic cells including being a building block of bacterial and fungal cell walls. In the absence of glutamine, GlmS catalyzes the isomerization of fructose 6-phosphate into glucose 6- phosphate (PGI-like activity). Glucosamine-6-phosphate deaminase (GlmD) cont
Probab=30.81 E-value=62 Score=27.86 Aligned_cols=31 Identities=23% Similarity=0.267 Sum_probs=25.3
Q ss_pred chhHHHHHHHHHHcCCeEEEEeCCChHHHHH
Q 011157 220 NGQVLQFVKMLREKGKKLFLLTNSPYYFVDG 250 (492)
Q Consensus 220 ~p~l~~~L~~Lk~~GkklfL~TNS~~~y~~~ 250 (492)
.+++.+.++..|+.|.+++.+||++..-...
T Consensus 59 t~e~~~~~~~a~~~g~~vi~iT~~~~s~la~ 89 (126)
T cd05008 59 TADTLAALRLAKEKGAKTVAITNVVGSTLAR 89 (126)
T ss_pred CHHHHHHHHHHHHcCCeEEEEECCCCChHHH
Confidence 3578899999999999999999987644433
No 248
>PRK08745 ribulose-phosphate 3-epimerase; Provisional
Probab=30.48 E-value=68 Score=31.74 Aligned_cols=49 Identities=18% Similarity=0.278 Sum_probs=36.0
Q ss_pred hhHHHHHHHHHHcCCeEEEEeCCCh--HHHHHhhhhhhccCCCCCCCcCCCccEEEEcCCCCCCCC
Q 011157 221 GQVLQFVKMLREKGKKLFLLTNSPY--YFVDGGMRFMLEDSTGYTDSWRELFDVVIAQANKPDFYT 284 (492)
Q Consensus 221 p~l~~~L~~Lk~~GkklfL~TNS~~--~y~~~vm~~l~~~~~~~g~~w~~yFD~iI~~a~KP~FF~ 284 (492)
+.+..+|+.+|+.|+|..|+-|-.- +.+...+ ++.|.|.+-+--|+|-+
T Consensus 97 ~~~~~~l~~Ir~~g~k~GlalnP~T~~~~i~~~l---------------~~vD~VlvMtV~PGf~G 147 (223)
T PRK08745 97 RHVHRTIQLIKSHGCQAGLVLNPATPVDILDWVL---------------PELDLVLVMSVNPGFGG 147 (223)
T ss_pred ccHHHHHHHHHHCCCceeEEeCCCCCHHHHHHHH---------------hhcCEEEEEEECCCCCC
Confidence 3477899999999999999988753 3333322 35578888888888774
No 249
>PLN03008 Phospholipase D delta
Probab=29.87 E-value=44 Score=39.28 Aligned_cols=63 Identities=17% Similarity=0.208 Sum_probs=42.6
Q ss_pred CCCCChhhHHHHHHHHHHHhhhhhhhHHHHhcCccchhccch--------hHHHHHHHHHHcCCeEEEEeCC
Q 011157 180 KLEFDASYIYEDVNRAIQHVHRRGLVHRGILSDPNRYLVKNG--------QVLQFVKMLREKGKKLFLLTNS 243 (492)
Q Consensus 180 ~~~~~~~~l~~DV~~av~~vh~~G~lk~~v~~np~kYi~k~p--------~l~~~L~~Lk~~GkklfL~TNS 243 (492)
+..+.+...|+||..|+..++..=.+-..-+ +|+-|+.++| .|-++|++-.+.|.+|+++---
T Consensus 232 g~~y~~~rcwedi~~AI~~Ak~~IyI~gWsl-~~ei~L~R~~~~~~~~~~~Lg~LLk~KA~eGVrV~ilvwd 302 (868)
T PLN03008 232 GKVYEHGKCWEDICYAISEAHHMIYIVGWSI-FHKIKLVRETKVPRDKDMTLGELLKYKSQEGVRVLLLVWD 302 (868)
T ss_pred CccccccccHHHHHHHHHhhhheEEEeceee-cceeEEecCCCCCCCCCccHHHHHHHHHHCCCEEEEEEec
Confidence 4456778899999999987653211111222 4555555543 5788999988999999998543
No 250
>TIGR01517 ATPase-IIB_Ca plasma-membrane calcium-translocating P-type ATPase. The calcium P-type ATPases have been characterized as Type IIB based on a phylogenetic analysis which distinguishes this group from the Type IIA SERCA calcium pump. A separate analysis divides Type IIA into sub-types (SERCA and PMR1), which are modelled by the corresponding TIGR01116 and TIGR01522. This model is well separated from the two others.
Probab=29.74 E-value=1.2e+02 Score=36.32 Aligned_cols=97 Identities=14% Similarity=0.059 Sum_probs=60.9
Q ss_pred chhHHHHHHHHHHcCCeEEEEeCCChHHHHHhhhhhhccCCCCCCCcCCCccEEEEcCCCCCCCCCCCCccccccCcCcc
Q 011157 220 NGQVLQFVKMLREKGKKLFLLTNSPYYFVDGGMRFMLEDSTGYTDSWRELFDVVIAQANKPDFYTSDHPFRCYDTEKDTL 299 (492)
Q Consensus 220 ~p~l~~~L~~Lk~~GkklfL~TNS~~~y~~~vm~~l~~~~~~~g~~w~~yFD~iI~~a~KP~FF~~~~pfr~vd~~~gk~ 299 (492)
.|++++.+++||++|.++.++|+-+..-+..+.+.+ ++.+-=+.++++.. |+..+.
T Consensus 581 r~~~~~aI~~l~~aGI~v~miTGD~~~tA~~iA~~~---------GI~~~~~~vi~G~~----------~~~l~~----- 636 (941)
T TIGR01517 581 RPGVREAVQECQRAGITVRMVTGDNIDTAKAIARNC---------GILTFGGLAMEGKE----------FRRLVY----- 636 (941)
T ss_pred chhHHHHHHHHHHCCCEEEEECCCChHHHHHHHHHc---------CCCCCCceEeeHHH----------hhhCCH-----
Confidence 368999999999999999999999999999988764 22110013555541 111110
Q ss_pred cccccc-ccCCCeeeccCCHH---HHHHHhCCCCCcEEEEcccccccc
Q 011157 300 AFTKVD-AFIPNKIYYHGCLK---SFLQITKWNGPEVIYFGDHLFSDL 343 (492)
Q Consensus 300 ~~~~~~-~l~~~~vY~~G~~~---~~~~~lg~~~~~vLyvGDhi~gDI 343 (492)
.+.. -+.+..||..-+-+ ++.+.+.-.|.-|+++||-+. |.
T Consensus 637 --~el~~~i~~~~Vfar~sPe~K~~iV~~lq~~g~vVam~GDGvN-Da 681 (941)
T TIGR01517 637 --EEMDPILPKLRVLARSSPLDKQLLVLMLKDMGEVVAVTGDGTN-DA 681 (941)
T ss_pred --HHHHHHhccCeEEEECCHHHHHHHHHHHHHCCCEEEEECCCCc-hH
Confidence 0111 12234677655432 244555557889999999984 45
No 251
>PRK15122 magnesium-transporting ATPase; Provisional
Probab=29.64 E-value=62 Score=38.53 Aligned_cols=93 Identities=15% Similarity=0.133 Sum_probs=59.3
Q ss_pred hhHHHHHHHHHHcCCeEEEEeCCChHHHHHhhhhhhccCCCCCCCcCCCccEEEEcCCCCCCCCCCCCccccccCcCccc
Q 011157 221 GQVLQFVKMLREKGKKLFLLTNSPYYFVDGGMRFMLEDSTGYTDSWRELFDVVIAQANKPDFYTSDHPFRCYDTEKDTLA 300 (492)
Q Consensus 221 p~l~~~L~~Lk~~GkklfL~TNS~~~y~~~vm~~l~~~~~~~g~~w~~yFD~iI~~a~KP~FF~~~~pfr~vd~~~gk~~ 300 (492)
|+.++.+++||++|+++.++|+-+..-+..+.+.+ |.. + +-++++.. +...+.
T Consensus 553 ~~a~~aI~~l~~aGI~v~miTGD~~~tA~aIA~~l-------GI~--~--~~vi~G~e----------l~~~~~------ 605 (903)
T PRK15122 553 ESAAPAIAALRENGVAVKVLTGDNPIVTAKICREV-------GLE--P--GEPLLGTE----------IEAMDD------ 605 (903)
T ss_pred HHHHHHHHHHHHCCCeEEEECCCCHHHHHHHHHHc-------CCC--C--CCccchHh----------hhhCCH------
Confidence 68999999999999999999999999999988875 331 1 22444431 111110
Q ss_pred ccccc-ccCCCeeeccCCHH---HHHHHhCCCCCcEEEEcccccc
Q 011157 301 FTKVD-AFIPNKIYYHGCLK---SFLQITKWNGPEVIYFGDHLFS 341 (492)
Q Consensus 301 ~~~~~-~l~~~~vY~~G~~~---~~~~~lg~~~~~vLyvGDhi~g 341 (492)
.... ..++..||..=+-+ ++.+.+.-.|.-|.++||-+..
T Consensus 606 -~el~~~v~~~~VfAr~sPe~K~~iV~~Lq~~G~vVamtGDGvND 649 (903)
T PRK15122 606 -AALAREVEERTVFAKLTPLQKSRVLKALQANGHTVGFLGDGIND 649 (903)
T ss_pred -HHHHHHhhhCCEEEEeCHHHHHHHHHHHHhCCCEEEEECCCchh
Confidence 0011 12234566654422 2445555578899999999654
No 252
>TIGR01490 HAD-SF-IB-hyp1 HAD-superfamily subfamily IB hydrolase, TIGR01490. A subset of these sequences, including the Caulobacter crescentus CicA protein, cluster together and may represent a separate equivalog.
Probab=29.47 E-value=32 Score=32.15 Aligned_cols=14 Identities=36% Similarity=0.389 Sum_probs=11.8
Q ss_pred EEEecccccccccc
Q 011157 51 YGFDYDYTLAHYSS 64 (492)
Q Consensus 51 iGFDmDyTLa~Y~~ 64 (492)
.-||+|+||+.-..
T Consensus 2 a~FD~DgTL~~~~s 15 (202)
T TIGR01490 2 AFFDFDGTLTAKDT 15 (202)
T ss_pred eEEccCCCCCCCch
Confidence 57999999999754
No 253
>PF12710 HAD: haloacid dehalogenase-like hydrolase; PDB: 3P96_A 3N28_A 3FVV_A 1RKU_A 1RKV_A 1Y8A_A 2FEA_B 3KD3_B.
Probab=29.35 E-value=29 Score=31.83 Aligned_cols=16 Identities=25% Similarity=0.345 Sum_probs=13.4
Q ss_pred CCCCCcEEEEcccccc
Q 011157 326 KWNGPEVIYFGDHLFS 341 (492)
Q Consensus 326 g~~~~~vLyvGDhi~g 341 (492)
+.....++||||+...
T Consensus 172 ~~~~~~~~~iGDs~~D 187 (192)
T PF12710_consen 172 DIDPDRVIAIGDSIND 187 (192)
T ss_dssp THTCCEEEEEESSGGG
T ss_pred CCCCCeEEEEECCHHH
Confidence 6788999999999753
No 254
>PRK14502 bifunctional mannosyl-3-phosphoglycerate synthase/mannosyl-3 phosphoglycerate phosphatase; Provisional
Probab=28.66 E-value=66 Score=37.12 Aligned_cols=43 Identities=16% Similarity=-0.117 Sum_probs=0.0
Q ss_pred ccccCCCccEEEEeccccccccccchHHHHHHHHHHHHHHhcCCC
Q 011157 41 KNLRLDNIQVYGFDYDYTLAHYSSNLQSLIYDLAKEHMVNEFRYP 85 (492)
Q Consensus 41 r~l~l~~i~~iGFDmDyTLa~Y~~~~~~l~y~~~~~~LV~~~gYP 85 (492)
++......++|-+||||||..-...... .--.++++|.+ .|.|
T Consensus 409 ~~~~~~~~KLIfsDLDGTLLd~d~~i~~-~t~eAL~~L~e-kGI~ 451 (694)
T PRK14502 409 LPSSGQFKKIVYTDLDGTLLNPLTYSYS-TALDALRLLKD-KELP 451 (694)
T ss_pred CCCcCceeeEEEEECcCCCcCCCCccCH-HHHHHHHHHHH-cCCe
No 255
>TIGR01545 YfhB_g-proteo haloacid dehalogenase superfamily, subfamily IF hydrolase, YfhB. The gene name comes from the E. coli gene. There is currently no information regarding the function of this gene.
Probab=28.60 E-value=30 Score=33.57 Aligned_cols=17 Identities=29% Similarity=0.284 Sum_probs=13.8
Q ss_pred CccEEEEeccccccccc
Q 011157 47 NIQVYGFDYDYTLAHYS 63 (492)
Q Consensus 47 ~i~~iGFDmDyTLa~Y~ 63 (492)
..++.-||+|+||.+=.
T Consensus 4 ~~~la~FDfDgTLt~~d 20 (210)
T TIGR01545 4 AKRIIFFDLDGTLHQQD 20 (210)
T ss_pred cCcEEEEcCCCCCccCc
Confidence 34678999999998764
No 256
>TIGR00685 T6PP trehalose-phosphatase. At least 18 distinct sequences from Arabidopsis have been identified, roughly half of these are of the fungal type, with a fused synthase and half are like the bacterial members having only the phosphatase domain. It has been suggested that trehalose is being used in Arabidopsis as a regulatory molecule in development and possibly other processes.
Probab=28.29 E-value=32 Score=33.86 Aligned_cols=39 Identities=23% Similarity=0.298 Sum_probs=28.8
Q ss_pred HHHHHHHhCCCCCcEEEEcccccccccccccC-------CcEEEEEe
Q 011157 318 LKSFLQITKWNGPEVIYFGDHLFSDLRGPSKA-------GWRTAAII 357 (492)
Q Consensus 318 ~~~~~~~lg~~~~~vLyvGDhi~gDI~~ak~~-------GwrT~~Vv 357 (492)
+..+++.++..+.+++||||... |+-..+.+ |-.++.|.
T Consensus 172 ~~~~~~~~~~~~~~~i~iGD~~~-D~~~~~~~~~~~~~~g~~~v~v~ 217 (244)
T TIGR00685 172 VKRLLWHQPGSGISPVYLGDDIT-DEDAFRVVNNQWGNYGFYPVPIG 217 (244)
T ss_pred HHHHHHhcccCCCceEEEcCCCc-HHHHHHHHhcccCCCCeEEEEEe
Confidence 45688889999999999999665 57444433 56677775
No 257
>PRK10187 trehalose-6-phosphate phosphatase; Provisional
Probab=27.54 E-value=56 Score=32.79 Aligned_cols=50 Identities=18% Similarity=0.260 Sum_probs=38.1
Q ss_pred hhhhHHHHhcCccchhccchhHHHHHHHHHH-cCCeEEEEeCCChHHHHHhhh
Q 011157 202 RGLVHRGILSDPNRYLVKNGQVLQFVKMLRE-KGKKLFLLTNSPYYFVDGGMR 253 (492)
Q Consensus 202 ~G~lk~~v~~np~kYi~k~p~l~~~L~~Lk~-~GkklfL~TNS~~~y~~~vm~ 253 (492)
||+|-... .+|+. ....|.+.++|++|++ .|.+++++|+-+...+...+.
T Consensus 22 DGTLl~~~-~~p~~-~~i~~~~~~~L~~L~~~~g~~v~i~SGR~~~~~~~~~~ 72 (266)
T PRK10187 22 DGTLAEIK-PHPDQ-VVVPDNILQGLQLLATANDGALALISGRSMVELDALAK 72 (266)
T ss_pred CCCCCCCC-CCccc-ccCCHHHHHHHHHHHhCCCCcEEEEeCCCHHHHHHhcC
Confidence 56665432 34554 3456889999999998 799999999999998887665
No 258
>TIGR01523 ATPase-IID_K-Na potassium and/or sodium efflux P-type ATPase, fungal-type. The Leishmania sequence (GP|3192903), which falls between trusted and noise in this model, may very well turn out to be an active potassium pump.
Probab=26.50 E-value=80 Score=38.31 Aligned_cols=36 Identities=11% Similarity=0.012 Sum_probs=32.8
Q ss_pred chhHHHHHHHHHHcCCeEEEEeCCChHHHHHhhhhh
Q 011157 220 NGQVLQFVKMLREKGKKLFLLTNSPYYFVDGGMRFM 255 (492)
Q Consensus 220 ~p~l~~~L~~Lk~~GkklfL~TNS~~~y~~~vm~~l 255 (492)
.|++++.++++|++|+++.++|+-+..-+..+.+-+
T Consensus 648 r~~v~~aI~~l~~aGIkv~MiTGD~~~tA~~iA~~~ 683 (1053)
T TIGR01523 648 RNESAGAVEKCHQAGINVHMLTGDFPETAKAIAQEV 683 (1053)
T ss_pred chhHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHHc
Confidence 468999999999999999999999999999888764
No 259
>TIGR01647 ATPase-IIIA_H plasma-membrane proton-efflux P-type ATPase. This model describes the plasma membrane proton efflux P-type ATPase found in plants, fungi, protozoa, slime molds and archaea. The best studied representative is from yeast.
Probab=26.39 E-value=60 Score=37.79 Aligned_cols=36 Identities=11% Similarity=0.134 Sum_probs=33.3
Q ss_pred chhHHHHHHHHHHcCCeEEEEeCCChHHHHHhhhhh
Q 011157 220 NGQVLQFVKMLREKGKKLFLLTNSPYYFVDGGMRFM 255 (492)
Q Consensus 220 ~p~l~~~L~~Lk~~GkklfL~TNS~~~y~~~vm~~l 255 (492)
.|+.++.+++||++|+++.++|+-+..-+..+.+.+
T Consensus 444 R~~a~~aI~~l~~aGI~v~miTGD~~~tA~~IA~~l 479 (755)
T TIGR01647 444 RHDTKETIERARHLGVEVKMVTGDHLAIAKETARRL 479 (755)
T ss_pred hhhHHHHHHHHHHCCCeEEEECCCCHHHHHHHHHHc
Confidence 378999999999999999999999999999988875
No 260
>PRK10517 magnesium-transporting ATPase MgtA; Provisional
Probab=26.11 E-value=91 Score=37.16 Aligned_cols=94 Identities=12% Similarity=0.115 Sum_probs=60.0
Q ss_pred chhHHHHHHHHHHcCCeEEEEeCCChHHHHHhhhhhhccCCCCCCCcCCCccEEEEcCCCCCCCCCCCCccccccCcCcc
Q 011157 220 NGQVLQFVKMLREKGKKLFLLTNSPYYFVDGGMRFMLEDSTGYTDSWRELFDVVIAQANKPDFYTSDHPFRCYDTEKDTL 299 (492)
Q Consensus 220 ~p~l~~~L~~Lk~~GkklfL~TNS~~~y~~~vm~~l~~~~~~~g~~w~~yFD~iI~~a~KP~FF~~~~pfr~vd~~~gk~ 299 (492)
.|+.++.+++|+++|+++.++|+-+..-+..+.+.+ |.+ =+-++++.. +...+.
T Consensus 552 R~~a~~aI~~l~~aGI~v~miTGD~~~tA~~IA~~l-------GI~----~~~v~~G~e----------l~~l~~----- 605 (902)
T PRK10517 552 KETTAPALKALKASGVTVKILTGDSELVAAKVCHEV-------GLD----AGEVLIGSD----------IETLSD----- 605 (902)
T ss_pred hhhHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHc-------CCC----ccCceeHHH----------HHhCCH-----
Confidence 368999999999999999999999999999988875 331 123454441 111110
Q ss_pred cccccc-ccCCCeeeccCCHH---HHHHHhCCCCCcEEEEcccccc
Q 011157 300 AFTKVD-AFIPNKIYYHGCLK---SFLQITKWNGPEVIYFGDHLFS 341 (492)
Q Consensus 300 ~~~~~~-~l~~~~vY~~G~~~---~~~~~lg~~~~~vLyvGDhi~g 341 (492)
.... ..++..||..=+-+ ++.+.+.-.|.-|.++||-+..
T Consensus 606 --~el~~~~~~~~VfAr~sPe~K~~IV~~Lq~~G~vVam~GDGvND 649 (902)
T PRK10517 606 --DELANLAERTTLFARLTPMHKERIVTLLKREGHVVGFMGDGIND 649 (902)
T ss_pred --HHHHHHHhhCcEEEEcCHHHHHHHHHHHHHCCCEEEEECCCcch
Confidence 0111 12234566654422 2445555678889999999754
No 261
>PF03031 NIF: NLI interacting factor-like phosphatase; InterPro: IPR004274 The function of this domain is unclear. It is found in proteins of diverse function including phosphatases some of which may be active in active in ternary elongation complexes and a number of NLI interacting factors. In the phospatases this domain is often present N-terminal to the BRCT domain (IPR001357 from INTERPRO).; GO: 0005515 protein binding; PDB: 3L0Y_A 2GHQ_A 3PGL_A 3L0C_B 1TA0_A 2GHT_A 3L0B_B 1T9Z_A 3QLE_A 2Q5E_E ....
Probab=26.06 E-value=36 Score=30.82 Aligned_cols=16 Identities=13% Similarity=0.011 Sum_probs=8.3
Q ss_pred CCCCCcEEEEcccccc
Q 011157 326 KWNGPEVIYFGDHLFS 341 (492)
Q Consensus 326 g~~~~~vLyvGDhi~g 341 (492)
|.+.++|+.|.|....
T Consensus 103 ~~~~~~vvivDD~~~~ 118 (159)
T PF03031_consen 103 GRDLDNVVIVDDSPRK 118 (159)
T ss_dssp SS-GGGEEEEES-GGG
T ss_pred hhccccEEEEeCCHHH
Confidence 4445566666666554
No 262
>PRK08091 ribulose-phosphate 3-epimerase; Validated
Probab=25.90 E-value=1.8e+02 Score=28.99 Aligned_cols=49 Identities=10% Similarity=0.048 Sum_probs=34.6
Q ss_pred hhHHHHHHHHHHcCC--eEEEEeCCC--hHHHHHhhhhhhccCCCCCCCcCCCccEEEEcCCCCCCCC
Q 011157 221 GQVLQFVKMLREKGK--KLFLLTNSP--YYFVDGGMRFMLEDSTGYTDSWRELFDVVIAQANKPDFYT 284 (492)
Q Consensus 221 p~l~~~L~~Lk~~Gk--klfL~TNS~--~~y~~~vm~~l~~~~~~~g~~w~~yFD~iI~~a~KP~FF~ 284 (492)
+.+..+|+++|+.|+ |..|+=|-. .+.+...+. +-|.|.+-+--|+|-+
T Consensus 103 ~~~~~~l~~Ik~~g~~~kaGlalnP~Tp~~~i~~~l~---------------~vD~VLiMtV~PGfgG 155 (228)
T PRK08091 103 HDLALTIEWLAKQKTTVLIGLCLCPETPISLLEPYLD---------------QIDLIQILTLDPRTGT 155 (228)
T ss_pred ccHHHHHHHHHHCCCCceEEEEECCCCCHHHHHHHHh---------------hcCEEEEEEECCCCCC
Confidence 357789999999999 888887764 444433333 4577888887787763
No 263
>PF01380 SIS: SIS domain SIS domain web page.; InterPro: IPR001347 The SIS (Sugar ISomerase) domain is a phosphosugar-binding domain [] found in many phosphosugar isomerases and phosphosugar binding proteins. SIS domains are also found in proteins that regulate the expression of genes involved in synthesis of phosphosugars possibly by binding to the end-product of the pathway.; GO: 0005529 sugar binding, 0005975 carbohydrate metabolic process; PDB: 3TBF_C 2V4M_A 2ZJ4_A 2ZJ3_A 3FKJ_A 3ODP_A 3EUA_H 1VIV_A 1M3S_B 1TZB_A ....
Probab=25.72 E-value=90 Score=26.71 Aligned_cols=31 Identities=13% Similarity=0.382 Sum_probs=25.4
Q ss_pred chhHHHHHHHHHHcCCeEEEEeCCChHHHHH
Q 011157 220 NGQVLQFVKMLREKGKKLFLLTNSPYYFVDG 250 (492)
Q Consensus 220 ~p~l~~~L~~Lk~~GkklfL~TNS~~~y~~~ 250 (492)
..++.+.++.+|+.|.+++++|++.-.-...
T Consensus 66 ~~~~~~~~~~ak~~g~~vi~iT~~~~~~l~~ 96 (131)
T PF01380_consen 66 TRELIELLRFAKERGAPVILITSNSESPLAR 96 (131)
T ss_dssp THHHHHHHHHHHHTTSEEEEEESSTTSHHHH
T ss_pred chhhhhhhHHHHhcCCeEEEEeCCCCCchhh
Confidence 3578889999999999999999876655544
No 264
>TIGR01485 SPP_plant-cyano sucrose-6F-phosphate phosphohydrolase. Sucrose phosphate synthase (SPS), the prior step in the biosynthesis of sucrose contains a domain which exhibits considerable similarity to SPP albeit without conservation of the catalytic residues. The catalytic machinery of the synthase resides in another domain. It seems likely that the phosphatase-like domain is involved in substrate binding, possibly binding both substrates in a "product-like" orientation prior to ligation by the synthase catalytic domain.
Probab=25.66 E-value=1.3e+02 Score=29.33 Aligned_cols=35 Identities=9% Similarity=-0.128 Sum_probs=31.2
Q ss_pred chhHHHHHHHHHHcCCeEEEEeCCChHHHHHhhhh
Q 011157 220 NGQVLQFVKMLREKGKKLFLLTNSPYYFVDGGMRF 254 (492)
Q Consensus 220 ~p~l~~~L~~Lk~~GkklfL~TNS~~~y~~~vm~~ 254 (492)
.|.+.+++++++++|.+++++|+.+..-+..++..
T Consensus 23 ~~~~~~~i~~~~~~gi~fv~aTGR~~~~~~~~~~~ 57 (249)
T TIGR01485 23 LLRLNALLEDHRGEDSLLVYSTGRSPHSYKELQKQ 57 (249)
T ss_pred HHHHHHHHHHhhccCceEEEEcCCCHHHHHHHHhc
Confidence 37899999999999999999999999988887664
No 265
>PF09419 PGP_phosphatase: Mitochondrial PGP phosphatase; InterPro: IPR010021 This group of hypothetical proteins is a part of the IIIA subfamily of the haloacid dehalogenase (HAD) superfamily of hydrolases. All characterised members of this subfamily and most characterised members of the HAD superfamily are phosphatases. HAD superfamily phosphatases contain active site residues in several conserved catalytic motifs [], all of which are found conserved here. This family consists of sequences from fungi, plants, cyanobacteria, Gram-positive bacteria and Deinococcus. There is presently no characterisation of any sequence in this family.
Probab=25.61 E-value=80 Score=29.97 Aligned_cols=37 Identities=22% Similarity=0.240 Sum_probs=24.1
Q ss_pred ccCCCccEEEEecccccccc-ccchHHHHHHHHHHHHHH
Q 011157 43 LRLDNIQVYGFDYDYTLAHY-SSNLQSLIYDLAKEHMVN 80 (492)
Q Consensus 43 l~l~~i~~iGFDmDyTLa~Y-~~~~~~l~y~~~~~~LV~ 80 (492)
|.=..|+++.||.|.||+.. +.+...- +....+.|.+
T Consensus 36 Lk~~Gik~li~DkDNTL~~~~~~~i~~~-~~~~~~~l~~ 73 (168)
T PF09419_consen 36 LKKKGIKALIFDKDNTLTPPYEDEIPPE-YAEWLNELKK 73 (168)
T ss_pred hhhcCceEEEEcCCCCCCCCCcCcCCHH-HHHHHHHHHH
Confidence 55678999999999999866 4432221 3334555543
No 266
>PTZ00174 phosphomannomutase; Provisional
Probab=25.55 E-value=1e+02 Score=30.23 Aligned_cols=33 Identities=18% Similarity=0.244 Sum_probs=27.5
Q ss_pred chhHHHHHHHHHHcCCeEEEEeCCChHHHHHhh
Q 011157 220 NGQVLQFVKMLREKGKKLFLLTNSPYYFVDGGM 252 (492)
Q Consensus 220 ~p~l~~~L~~Lk~~GkklfL~TNS~~~y~~~vm 252 (492)
.|...+.|++++++|++++++|+.+..-+...+
T Consensus 24 s~~~~~ai~~l~~~Gi~~viaTGR~~~~i~~~l 56 (247)
T PTZ00174 24 TQEMKDTLAKLKSKGFKIGVVGGSDYPKIKEQL 56 (247)
T ss_pred CHHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHH
Confidence 466889999999999999999999888654433
No 267
>PF08235 LNS2: LNS2 (Lipin/Ned1/Smp2); InterPro: IPR013209 This domain is found in Saccharomyces cerevisiae (Baker's yeast) protein SMP2, proteins with an N-terminal lipin domain (IPR007651 from INTERPRO) and phosphatidylinositol transfer proteins []. SMP2 is involved in plasmid maintenance and respiration []. Lipin proteins are involved in adipose tissue development and insulin resistance [].
Probab=25.25 E-value=1.3e+02 Score=28.20 Aligned_cols=39 Identities=13% Similarity=0.271 Sum_probs=35.4
Q ss_pred chhHHHHHHHHHHcCCeEEEEeCCChHHHHHhhhhhhcc
Q 011157 220 NGQVLQFVKMLREKGKKLFLLTNSPYYFVDGGMRFMLED 258 (492)
Q Consensus 220 ~p~l~~~L~~Lk~~GkklfL~TNS~~~y~~~vm~~l~~~ 258 (492)
.|++.++.++++++|+++.-+|.-+..-.+...+||-..
T Consensus 29 h~g~~~l~~~i~~~GY~ilYlTaRp~~qa~~Tr~~L~~~ 67 (157)
T PF08235_consen 29 HPGAAELYRKIADNGYKILYLTARPIGQANRTRSWLAQH 67 (157)
T ss_pred hhcHHHHHHHHHHCCeEEEEECcCcHHHHHHHHHHHHHH
Confidence 378999999999999999999999999999999998654
No 268
>KOG3085 consensus Predicted hydrolase (HAD superfamily) [General function prediction only]
Probab=23.82 E-value=48 Score=33.29 Aligned_cols=20 Identities=30% Similarity=0.189 Sum_probs=17.7
Q ss_pred CCCccEEEEecccccccccc
Q 011157 45 LDNIQVYGFDYDYTLAHYSS 64 (492)
Q Consensus 45 l~~i~~iGFDmDyTLa~Y~~ 64 (492)
+..|+++-||+++||+++++
T Consensus 4 ~~~iravtfD~~~tLl~~~~ 23 (237)
T KOG3085|consen 4 LMRIRAVTFDAGGTLLATLP 23 (237)
T ss_pred ccceEEEEEeCCCceeecCC
Confidence 56889999999999999864
No 269
>PF05240 APOBEC_C: APOBEC-like C-terminal domain; InterPro: IPR007904 This domain is found at the C terminus of the Apolipoprotein B mRNA editing enzyme. Apobec-1 catalyzes C to U editing of apolipoprotein B (apoB) mRNA in the mammalian intestine. C to U RNA editing of mammalian apolipoprotein B (apoB) RNA is a site-specific posttranscriptional modification in which a single cytidine is enzymatically deaminated to uridine, thereby generating a UAA stop codon in the edited mRNA. The function of this domain is currently unknown.; GO: 0008270 zinc ion binding, 0016814 hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in cyclic amidines; PDB: 2NYT_D.
Probab=23.70 E-value=55 Score=25.50 Aligned_cols=30 Identities=13% Similarity=0.220 Sum_probs=22.5
Q ss_pred chhHHHHHHHHHHcCCeEEEEeCCChHHHH
Q 011157 220 NGQVLQFVKMLREKGKKLFLLTNSPYYFVD 249 (492)
Q Consensus 220 ~p~l~~~L~~Lk~~GkklfL~TNS~~~y~~ 249 (492)
+|.-.+-|.+|.++|.+|-++|=+.+.|+=
T Consensus 1 d~~~qegLr~L~~aG~~v~iM~~~eF~~CW 30 (55)
T PF05240_consen 1 DPDYQEGLRRLCQAGAQVSIMTYSEFQYCW 30 (55)
T ss_dssp SHHHHHHHHHHHHTT-EEEE--HHHHHHHH
T ss_pred CcHHHHHHHHHHHCCCeEEecCcHHHHHHH
Confidence 466788899999999999999988877763
No 270
>PF00571 CBS: CBS domain CBS domain web page. Mutations in the CBS domain of Swiss:P35520 lead to homocystinuria.; InterPro: IPR000644 CBS (cystathionine-beta-synthase) domains are small intracellular modules, mostly found in two or four copies within a protein, that occur in a variety of proteins in bacteria, archaea, and eukaryotes [, ]. Tandem pairs of CBS domains can act as binding domains for adenosine derivatives and may regulate the activity of attached enzymatic or other domains []. In some cases, CBS domains may act as sensors of cellular energy status by being activated by AMP and inhibited by ATP []. In chloride ion channels, the CBS domains have been implicated in intracellular targeting and trafficking, as well as in protein-protein interactions, but results vary with different channels: in the CLC-5 channel, the CBS domain was shown to be required for trafficking [], while in the CLC-1 channel, the CBS domain was shown to be critical for channel function, but not necessary for trafficking []. Recent experiments revealing that CBS domains can bind adenosine-containing ligands such ATP, AMP, or S-adenosylmethionine have led to the hypothesis that CBS domains function as sensors of intracellular metabolites [, ]. Crystallographic studies of CBS domains have shown that pairs of CBS sequences form a globular domain where each CBS unit adopts a beta-alpha-beta-beta-alpha pattern []. Crystal structure of the CBS domains of the AMP-activated protein kinase in complexes with AMP and ATP shows that the phosphate groups of AMP/ATP lie in a surface pocket at the interface of two CBS domains, which is lined with basic residues, many of which are associated with disease-causing mutations []. In humans, mutations in conserved residues within CBS domains cause a variety of human hereditary diseases, including (with the gene mutated in parentheses): homocystinuria (cystathionine beta-synthase); Wolff-Parkinson-White syndrome (gamma 2 subunit of AMP-activated protein kinase); retinitis pigmentosa (IMP dehydrogenase-1); congenital myotonia, idiopathic generalized epilepsy, hypercalciuric nephrolithiasis, and classic Bartter syndrome (CLC chloride channel family members).; GO: 0005515 protein binding; PDB: 3JTF_A 3TE5_C 3TDH_C 3T4N_C 2QLV_C 3OI8_A 3LV9_A 2QH1_B 1PVM_B 3LQN_A ....
Probab=23.50 E-value=1.2e+02 Score=22.05 Aligned_cols=39 Identities=10% Similarity=0.221 Sum_probs=31.4
Q ss_pred HHhcCccchhccchhHHHHHHHHHHcCCeEEEEeCCChH
Q 011157 208 GILSDPNRYLVKNGQVLQFVKMLREKGKKLFLLTNSPYY 246 (492)
Q Consensus 208 ~v~~np~kYi~k~p~l~~~L~~Lk~~GkklfL~TNS~~~ 246 (492)
.++..+--.+.++..+.+.++.|++.|...+.++|+.-.
T Consensus 3 ~~m~~~~~~v~~~~~l~~~~~~~~~~~~~~~~V~d~~~~ 41 (57)
T PF00571_consen 3 DIMTPPPITVSPDDSLEEALEIMRKNGISRLPVVDEDGK 41 (57)
T ss_dssp HHSBSSSEEEETTSBHHHHHHHHHHHTSSEEEEESTTSB
T ss_pred ECCcCCCEEEcCcCcHHHHHHHHHHcCCcEEEEEecCCE
Confidence 345556667778889999999999999999999987633
No 271
>TIGR00685 T6PP trehalose-phosphatase. At least 18 distinct sequences from Arabidopsis have been identified, roughly half of these are of the fungal type, with a fused synthase and half are like the bacterial members having only the phosphatase domain. It has been suggested that trehalose is being used in Arabidopsis as a regulatory molecule in development and possibly other processes.
Probab=23.42 E-value=65 Score=31.64 Aligned_cols=15 Identities=40% Similarity=0.622 Sum_probs=13.0
Q ss_pred cEEEEeccccccccc
Q 011157 49 QVYGFDYDYTLAHYS 63 (492)
Q Consensus 49 ~~iGFDmDyTLa~Y~ 63 (492)
.++-||+||||+...
T Consensus 4 ~~l~lD~DGTL~~~~ 18 (244)
T TIGR00685 4 RAFFFDYDGTLSEIV 18 (244)
T ss_pred EEEEEecCccccCCc
Confidence 468899999999984
No 272
>KOG2795 consensus Catalytic subunit of the meiotic double strand break transesterase [Replication, recombination and repair]
Probab=23.26 E-value=53 Score=34.97 Aligned_cols=92 Identities=21% Similarity=0.265 Sum_probs=61.0
Q ss_pred cCCCccEEEEecccccccccc-chHHHHHHHHHHHH-----HHhcCCCcc-----ccCCCCCCCCcccceeeecCCCeEE
Q 011157 44 RLDNIQVYGFDYDYTLAHYSS-NLQSLIYDLAKEHM-----VNEFRYPEV-----CISFKYDPNFPIRGLYYDKQKGCLL 112 (492)
Q Consensus 44 ~l~~i~~iGFDmDyTLa~Y~~-~~~~l~y~~~~~~L-----V~~~gYP~~-----ll~~~~d~~f~~RGLv~D~~~GnlL 112 (492)
++.+|.-+-=|++++|+.=+. .|+.|+=|...+.. |.-+|||.- +..++-.-.+++=||+
T Consensus 182 d~~~i~~i~tdA~~IlIVEKeavFqrL~~d~~~~~~~~~ilITgKGyPD~~TR~fLkkL~~~~~lpv~~Lv--------- 252 (372)
T KOG2795|consen 182 DIDDISNITTDAKFILIVEKEAVFQRLAEDNFFNTFNRCILITGKGYPDIATRLFLKKLEEKLKLPVYGLV--------- 252 (372)
T ss_pred CHHHHhhhhccceEEEEEehHHHHHHHHHHHHHhhcCCeEEEecCCCCcHHHHHHHHHHHHHhCCCEEEEe---------
Confidence 455555566788888988886 58888877777765 566899953 1123322266777776
Q ss_pred EecCCCceeecccc-cCCCCCCHHHHHHHhCCcc
Q 011157 113 KLDFFGSIEPDGCY-FGRRKLSRKEIAEIYGTRH 145 (492)
Q Consensus 113 Kvd~~g~I~~~~~~-hG~~~ls~~ei~~~Y~~~~ 145 (492)
-.|+||- ....+| ||.+.++.|--...+++-.
T Consensus 253 DaDP~Gi-~I~~~Yk~GS~~ms~e~~~~~~p~I~ 285 (372)
T KOG2795|consen 253 DADPYGI-EILLTYKYGSKSMSYESHGLTVPTIR 285 (372)
T ss_pred ecCCcce-EEEEEeeeCccccccccccccCCcce
Confidence 5688885 222355 8988888776555555544
No 273
>TIGR01656 Histidinol-ppas histidinol-phosphate phosphatase family domain. This domain is a member of the haloacid-dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. This superfamily is distinguished by the presence of three motifs: an N-terminal motif containing the nucleophilic aspartate, a central motif containing an conserved serine or threonine, and a C-terminal motif containing a conserved lysine (or arginine) and conserved aspartates. More specifically, the domian modelled here is a member of subfamily III of the HAD-superfamily by virtue of lacking a "capping" domain in either of the two common positions, between motifs 1 and 2, or between motifs 2 and 3.
Probab=23.06 E-value=45 Score=30.05 Aligned_cols=16 Identities=13% Similarity=0.021 Sum_probs=13.2
Q ss_pred cEEEEecccccccccc
Q 011157 49 QVYGFDYDYTLAHYSS 64 (492)
Q Consensus 49 ~~iGFDmDyTLa~Y~~ 64 (492)
+++-||+||||+.=+.
T Consensus 1 ~~~~~d~dgtl~~~~~ 16 (147)
T TIGR01656 1 PALFLDRDGVINEDTV 16 (147)
T ss_pred CeEEEeCCCceeccCC
Confidence 4789999999987753
No 274
>KOG2134 consensus Polynucleotide kinase 3' phosphatase [Replication, recombination and repair]
Probab=22.92 E-value=42 Score=36.08 Aligned_cols=27 Identities=30% Similarity=0.423 Sum_probs=18.8
Q ss_pred eEEcccccCCCccEEEEecccccccccc
Q 011157 37 IYVNKNLRLDNIQVYGFDYDYTLAHYSS 64 (492)
Q Consensus 37 VF~nr~l~l~~i~~iGFDmDyTLa~Y~~ 64 (492)
||----++ ..-+.++||||+||+-=++
T Consensus 65 i~~~~~v~-~~~K~i~FD~dgtlI~t~s 91 (422)
T KOG2134|consen 65 IFTLPKVN-GGSKIIMFDYDGTLIDTKS 91 (422)
T ss_pred EeeccccC-CCcceEEEecCCceeecCC
Confidence 34333344 4567899999999987654
No 275
>TIGR03127 RuMP_HxlB 6-phospho 3-hexuloisomerase. Members of this protein family are 6-phospho 3-hexuloisomerase (PHI), or the PHI domain of a fusion protein. This enzyme is part of the ribulose monophosphate (RuMP) pathway, which in one direction removes the toxic metabolite formaldehyde by assimilation into fructose-6-phosphate. In the other direction, in species lacking a complete pentose phosphate pathway, the RuMP pathway yields ribulose-5-phosphate, necessary for nucleotide biosynthesis, at the cost of also yielding formaldehyde. These latter species tend usually have a formaldehyde-activating enzyme to attach formaldehyde to the C1 carrier tetrahydromethanopterin.
Probab=22.89 E-value=97 Score=28.73 Aligned_cols=31 Identities=16% Similarity=0.232 Sum_probs=25.4
Q ss_pred chhHHHHHHHHHHcCCeEEEEeCCChHHHHH
Q 011157 220 NGQVLQFVKMLREKGKKLFLLTNSPYYFVDG 250 (492)
Q Consensus 220 ~p~l~~~L~~Lk~~GkklfL~TNS~~~y~~~ 250 (492)
.+.+.+.++.+|+.|.+++++|+++-.-...
T Consensus 85 t~~~i~~~~~ak~~g~~ii~IT~~~~s~la~ 115 (179)
T TIGR03127 85 TESLVTVAKKAKEIGATVAAITTNPESTLGK 115 (179)
T ss_pred cHHHHHHHHHHHHCCCeEEEEECCCCCchHH
Confidence 4678899999999999999999987654443
No 276
>PF13086 AAA_11: AAA domain; PDB: 2XZL_A 2XZO_A 2WJY_A 2WJV_A 2XZP_A 2GK6_A 2GK7_A 2GJK_A.
Probab=22.82 E-value=2.4e+02 Score=26.14 Aligned_cols=16 Identities=13% Similarity=0.146 Sum_probs=10.7
Q ss_pred HhCCCCCcEEEEcccc
Q 011157 324 ITKWNGPEVIYFGDHL 339 (492)
Q Consensus 324 ~lg~~~~~vLyvGDhi 339 (492)
.+....++++.||||-
T Consensus 212 ~l~~~~~~~vlvGD~~ 227 (236)
T PF13086_consen 212 PLSRAPKRIVLVGDPK 227 (236)
T ss_dssp HHTTTBSEEEEEE-TT
T ss_pred HHHHhCCEEEEECChh
Confidence 3444459999999984
No 277
>PF11629 Mst1_SARAH: C terminal SARAH domain of Mst1; InterPro: IPR024205 The SARAH (Sav/Rassf/Hpo) domain is found at the C terminus in three classes of eukaryotic tumour suppressors that give the domain its name. In the Sav (Salvador) and Hpo (Hippo) families, the SARAH domain mediates signal transduction from Hpo via the Sav scaffolding protein to the downstream component Wts (Warts); the phosphorylation of Wts by Hpo triggers cell cycle arrest and apoptosis by down-regulating cyclin E, Diap 1 and other targets []. The SARAH domain is also involved in dimerisation, as in the human Hpo orthologue, Mst1, which homodimerises via its C-terminal SARAH domain. The SARAH domain is found associated with other domains, such as protein kinase domains, WW/rsp5/WWP domain (IPR001202 from INTERPRO), C1 domain (IPR002219 from INTERPRO), LIM domain (IPR001781 from INTERPRO), or the Ras-associating (RA) domain (IPR000159 from INTERPRO).; GO: 0004674 protein serine/threonine kinase activity; PDB: 2JO8_A.
Probab=22.29 E-value=69 Score=24.42 Aligned_cols=21 Identities=38% Similarity=0.737 Sum_probs=17.5
Q ss_pred ChHHHHHHHHHHHHHHhhccc
Q 011157 1 MDDEIAKIRQEFNAAKQSFLK 21 (492)
Q Consensus 1 ~~~~~~~~~~~~~~~~~~~~~ 21 (492)
||.|++.||..|++-+|-..|
T Consensus 24 ME~Eieelr~RY~~KRqPIld 44 (49)
T PF11629_consen 24 MEQEIEELRQRYQAKRQPILD 44 (49)
T ss_dssp HHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHhhccHHH
Confidence 588999999999998876544
No 278
>TIGR01486 HAD-SF-IIB-MPGP mannosyl-3-phosphoglycerate phosphatase family. This small group of proteins is a member of the IIB subfamily (TIGR01484) of the Haloacid Dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. Several members of this family from thermophiles (and from Dehalococcoides ethenogenes) are now known to act as mannosyl-3-phosphoglycerate (MPG) phosphatase. In these cases, the enzyme acts after MPG synthase to make the compatible solute mannosylglycerate. We propose that other mesophilic members of this family do not act as mannosyl-3-phosphoglycerate phosphatase. A member of this family is found in Escherichia coli, which appears to lack MPG synthase. Mannosylglycerate is imported in E. coli by phosphoenolpyruvate-dependent transporter (PubMed:14645248), but it appears the phosphorylation is not on the glycerate moiety, that the phosphorylated import is degraded by an alpha-mannosidase from an adjacent gene, and that E. coli would have no pathway to obta
Probab=21.82 E-value=70 Score=31.44 Aligned_cols=36 Identities=17% Similarity=0.072 Sum_probs=28.2
Q ss_pred HHHHHHHhCCC--CCcEEEEcccccccccccccCCcEEE
Q 011157 318 LKSFLQITKWN--GPEVIYFGDHLFSDLRGPSKAGWRTA 354 (492)
Q Consensus 318 ~~~~~~~lg~~--~~~vLyvGDhi~gDI~~ak~~GwrT~ 354 (492)
++.+++.+|++ .+++++|||+.. |+---+.+|+-.+
T Consensus 181 i~~l~~~~~i~~~~~~~~a~GD~~N-D~~Ml~~ag~~va 218 (256)
T TIGR01486 181 ANALKQFYNQPGGAIKVVGLGDSPN-DLPLLEVVDLAVV 218 (256)
T ss_pred HHHHHHHHhhcCCCceEEEEcCCHh-hHHHHHHCCEEEE
Confidence 57788999999 999999999987 6854455676544
No 279
>PRK08942 D,D-heptose 1,7-bisphosphate phosphatase; Validated
Probab=21.75 E-value=55 Score=30.42 Aligned_cols=15 Identities=13% Similarity=0.118 Sum_probs=12.4
Q ss_pred CccEEEEeccccccc
Q 011157 47 NIQVYGFDYDYTLAH 61 (492)
Q Consensus 47 ~i~~iGFDmDyTLa~ 61 (492)
-++++-||+|+||..
T Consensus 2 ~~~~~~~d~~~t~~~ 16 (181)
T PRK08942 2 SMKAIFLDRDGVINV 16 (181)
T ss_pred CccEEEEECCCCccc
Confidence 368999999999843
No 280
>cd05710 SIS_1 A subgroup of the SIS domain. SIS (Sugar ISomerase) domains are found in many phosphosugar isomerases and phosphosugar binding proteins. SIS domains are also found in proteins that regulate the expression of genes involved in synthesis of phosphosugars.
Probab=21.73 E-value=1.2e+02 Score=26.46 Aligned_cols=31 Identities=19% Similarity=0.205 Sum_probs=25.5
Q ss_pred chhHHHHHHHHHHcCCeEEEEeCCChHHHHH
Q 011157 220 NGQVLQFVKMLREKGKKLFLLTNSPYYFVDG 250 (492)
Q Consensus 220 ~p~l~~~L~~Lk~~GkklfL~TNS~~~y~~~ 250 (492)
.+++.+.++.+|+.|.+++.+||+.-.-...
T Consensus 60 t~~~~~~~~~a~~~g~~vi~iT~~~~s~la~ 90 (120)
T cd05710 60 TKETVAAAKFAKEKGATVIGLTDDEDSPLAK 90 (120)
T ss_pred ChHHHHHHHHHHHcCCeEEEEECCCCCcHHH
Confidence 4678889999999999999999987654443
No 281
>TIGR01668 YqeG_hyp_ppase HAD superfamily (subfamily IIIA) phosphatase, TIGR01668. This family consists of sequences from fungi, plants, cyanobacteria, gram-positive bacteria and Deinococcus. There is presently no characterization of any sequence in this family.
Probab=21.57 E-value=94 Score=28.83 Aligned_cols=40 Identities=15% Similarity=-0.061 Sum_probs=26.5
Q ss_pred cCCCccEEEEecccccccccc--chHHHHHHHHHHHHHHhcCCCc
Q 011157 44 RLDNIQVYGFDYDYTLAHYSS--NLQSLIYDLAKEHMVNEFRYPE 86 (492)
Q Consensus 44 ~l~~i~~iGFDmDyTLa~Y~~--~~~~l~y~~~~~~LV~~~gYP~ 86 (492)
.-.+++++.+|+|+||..... .+.. ...+++.|.+ .|++-
T Consensus 21 ~~~~v~~vv~D~Dgtl~~~~~~~~~pg--v~e~L~~Lk~-~g~~l 62 (170)
T TIGR01668 21 KKVGIKGVVLDKDNTLVYPDHNEAYPA--LRDWIEELKA-AGRKL 62 (170)
T ss_pred HHCCCCEEEEecCCccccCCCCCcChh--HHHHHHHHHH-cCCEE
Confidence 457999999999999998753 2332 2334566653 56553
No 282
>cd05013 SIS_RpiR RpiR-like protein. RpiR contains a SIS (Sugar ISomerase) domain, which is found in many phosphosugar isomerases and phosphosugar binding proteins. In E. coli, rpiR negatively regulates the expression of rpiB gene. Both rpiB and rpiA are ribose phosphate isomerases that catalyze the reversible reactions of ribose 5-phosphate into ribulose 5-phosphate.
Probab=20.85 E-value=1.2e+02 Score=25.96 Aligned_cols=26 Identities=19% Similarity=0.400 Sum_probs=22.5
Q ss_pred hhHHHHHHHHHHcCCeEEEEeCCChH
Q 011157 221 GQVLQFVKMLREKGKKLFLLTNSPYY 246 (492)
Q Consensus 221 p~l~~~L~~Lk~~GkklfL~TNS~~~ 246 (492)
+.+...++.+++.|.+++++|++.-.
T Consensus 74 ~~~~~~~~~a~~~g~~iv~iT~~~~~ 99 (139)
T cd05013 74 KETVEAAEIAKERGAKVIAITDSANS 99 (139)
T ss_pred HHHHHHHHHHHHcCCeEEEEcCCCCC
Confidence 56888899999999999999998653
No 283
>cd05005 SIS_PHI Hexulose-6-phosphate isomerase (PHI). PHI is a member of the SIS (Sugar ISomerase domain) superfamily. In the ribulose monophosphate pathway of formaldehyde fixation, hexulose-6-phosphate synthase catalyzes the condensation of ribulose-5-phosphate with formadelhyde to become hexulose-6-phosphate, which is then isomerized to fructose-6-phosphate by PHI.
Probab=20.48 E-value=1.2e+02 Score=28.29 Aligned_cols=29 Identities=21% Similarity=0.348 Sum_probs=24.3
Q ss_pred chhHHHHHHHHHHcCCeEEEEeCCChHHH
Q 011157 220 NGQVLQFVKMLREKGKKLFLLTNSPYYFV 248 (492)
Q Consensus 220 ~p~l~~~L~~Lk~~GkklfL~TNS~~~y~ 248 (492)
.+.+...++..|+.|.+++.+|+++-.-.
T Consensus 88 t~~~i~~~~~ak~~g~~iI~IT~~~~s~l 116 (179)
T cd05005 88 TSSVVNAAEKAKKAGAKVVLITSNPDSPL 116 (179)
T ss_pred cHHHHHHHHHHHHCCCeEEEEECCCCCch
Confidence 46788899999999999999999875433
No 284
>TIGR01663 PNK-3'Pase polynucleotide 5'-kinase 3'-phosphatase. Note that the EC number for the kinase function is: 2.7.1.78
Probab=20.40 E-value=73 Score=35.65 Aligned_cols=17 Identities=29% Similarity=0.446 Sum_probs=15.0
Q ss_pred CCccEEEEecccccccc
Q 011157 46 DNIQVYGFDYDYTLAHY 62 (492)
Q Consensus 46 ~~i~~iGFDmDyTLa~Y 62 (492)
...+++.||+||||+.-
T Consensus 166 ~~~Kia~fD~DGTLi~t 182 (526)
T TIGR01663 166 GQEKIAGFDLDGTIIKT 182 (526)
T ss_pred ccCcEEEEECCCCcccc
Confidence 66799999999999974
No 285
>TIGR01494 ATPase_P-type ATPase, P-type (transporting), HAD superfamily, subfamily IC. The crystal structure of one calcium-pumping ATPase and an analysis of the fold of the catalytic domain of the P-type ATPases have been published. These reveal that the catalytic core of these enzymes is a haloacid dehalogenase(HAD)-type aspartate-nucleophile hydrolase. The location of the ATP-binding loop in between the first and second HAD conserved catalytic motifs defines these enzymes as members of subfamily I of the HAD superfamily (see also TIGR01493, TIGR01509, TIGR01549, TIGR01544 and TIGR01545). Based on these classifications, the P-type ATPase _superfamily_ corresponds to the IC subfamily of the HAD superfamily.
Probab=20.28 E-value=1.7e+02 Score=31.91 Aligned_cols=36 Identities=17% Similarity=0.237 Sum_probs=32.4
Q ss_pred chhHHHHHHHHHHcCCeEEEEeCCChHHHHHhhhhh
Q 011157 220 NGQVLQFVKMLREKGKKLFLLTNSPYYFVDGGMRFM 255 (492)
Q Consensus 220 ~p~l~~~L~~Lk~~GkklfL~TNS~~~y~~~vm~~l 255 (492)
.|+..+.++.|+++|.++.++|.-+..-+..+.+.+
T Consensus 349 r~~~~~~i~~l~~~gi~~~~ltGD~~~~a~~ia~~l 384 (499)
T TIGR01494 349 RDDAKETISELREAGIRVIMLTGDNVLTAKAIAKEL 384 (499)
T ss_pred chhHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHc
Confidence 368999999999999999999999999999888764
No 286
>TIGR00441 gmhA phosphoheptose isomerase. Involved in lipopolysaccharide biosynthesis it may have a role in virulence in Haemophilus ducreyi.
Probab=20.02 E-value=1.5e+02 Score=27.14 Aligned_cols=27 Identities=22% Similarity=0.265 Sum_probs=23.3
Q ss_pred chhHHHHHHHHHHcCCeEEEEeCCChH
Q 011157 220 NGQVLQFVKMLREKGKKLFLLTNSPYY 246 (492)
Q Consensus 220 ~p~l~~~L~~Lk~~GkklfL~TNS~~~ 246 (492)
++.+.+.++..|+.|.+++.+|+++..
T Consensus 92 t~~~~~~~~~a~~~g~~ii~iT~~~~s 118 (154)
T TIGR00441 92 SKNVLKAIEAAKDKGMKTITLAGKDGG 118 (154)
T ss_pred CHHHHHHHHHHHHCCCEEEEEeCCCCC
Confidence 467889999999999999999996543
Done!