BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 011158
(492 letters)
Database: pdbaa
62,578 sequences; 14,973,337 total letters
Searching..................................................done
>pdb|3PPZ|A Chain A, Crystal Structure Of Ctr1 Kinase Domain In Complex With
Staurosporine
pdb|3PPZ|B Chain B, Crystal Structure Of Ctr1 Kinase Domain In Complex With
Staurosporine
Length = 309
Score = 125 bits (315), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 73/178 (41%), Positives = 107/178 (60%), Gaps = 15/178 (8%)
Query: 282 DGTDVWEIDPKHLKFGSKVASGSYGDLYRGTYCSQDVAIKVLKPERINSDMQKEFAQEVF 341
DG D+ +I L K+ +GS+G ++R + DVA+K+L + +++ EF +EV
Sbjct: 28 DGDDM-DIPWCDLNIKEKIGAGSFGTVHRAEWHGSDVAVKILMEQDFHAERVNEFLREVA 86
Query: 342 IMRKVRHKNVVQFIGACTKPPSLCIVTEFMSGGSVYDYLHKLKGVFKLPS--LLKVAIDV 399
IM+++RH N+V F+GA T+PP+L IVTE++S GS+Y LHK +L L +A DV
Sbjct: 87 IMKRLRHPNIVLFMGAVTQPPNLSIVTEYLSRGSLYRLLHKSGAREQLDERRRLSMAYDV 146
Query: 400 SKGMNYLHQNN--IIHRDLKAANLLMDENEVSLLLSLCLFTVSILFCGKGRELISLFL 455
+KGMNYLH N I+HRDLK+ NLL+D+ +TV + G R S FL
Sbjct: 147 AKGMNYLHNRNPPIVHRDLKSPNLLVDKK----------YTVKVCDFGLSRLKASXFL 194
>pdb|3P86|A Chain A, Crystal Structure Of Ctr1 Kinase Domain Mutant D676n In
Complex With Staurosporine
pdb|3P86|B Chain B, Crystal Structure Of Ctr1 Kinase Domain Mutant D676n In
Complex With Staurosporine
Length = 309
Score = 124 bits (311), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 72/180 (40%), Positives = 108/180 (60%), Gaps = 15/180 (8%)
Query: 282 DGTDVWEIDPKHLKFGSKVASGSYGDLYRGTYCSQDVAIKVLKPERINSDMQKEFAQEVF 341
DG D+ +I L K+ +GS+G ++R + DVA+K+L + +++ EF +EV
Sbjct: 28 DGDDM-DIPWCDLNIKEKIGAGSFGTVHRAEWHGSDVAVKILMEQDFHAERVNEFLREVA 86
Query: 342 IMRKVRHKNVVQFIGACTKPPSLCIVTEFMSGGSVYDYLHKLKGVFKLPS--LLKVAIDV 399
IM+++RH N+V F+GA T+PP+L IVTE++S GS+Y LHK +L L +A DV
Sbjct: 87 IMKRLRHPNIVLFMGAVTQPPNLSIVTEYLSRGSLYRLLHKSGAREQLDERRRLSMAYDV 146
Query: 400 SKGMNYLHQNN--IIHRDLKAANLLMDENEVSLLLSLCLFTVSILFCGKGRELISLFLGN 457
+KGMNYLH N I+HR+LK+ NLL+D+ +TV + G R S FL +
Sbjct: 147 AKGMNYLHNRNPPIVHRNLKSPNLLVDKK----------YTVKVCDFGLSRLKASTFLSS 196
>pdb|3C4C|A Chain A, B-Raf Kinase In Complex With Plx4720
pdb|3C4C|B Chain B, B-Raf Kinase In Complex With Plx4720
Length = 280
Score = 118 bits (296), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 60/164 (36%), Positives = 95/164 (57%), Gaps = 2/164 (1%)
Query: 282 DGTDVWEIDPKHLKFGSKVASGSYGDLYRGTYCSQDVAIKVLKPERINSDMQKEFAQEVF 341
D +D WEI + G ++ SGS+G +Y+G + DVA+K+L + F EV
Sbjct: 2 DSSDDWEIPDGQITVGQRIGSGSFGTVYKGKWHG-DVAVKMLNVTAPTPQQLQAFKNEVG 60
Query: 342 IMRKVRHKNVVQFIGACTKPPSLCIVTEFMSGGSVYDYLHKLKGVFKLPSLLKVAIDVSK 401
++RK RH N++ F+G TKP L IVT++ G S+Y +LH + F++ L+ +A ++
Sbjct: 61 VLRKTRHVNILLFMGYSTKP-QLAIVTQWCEGSSLYHHLHASETKFEMKKLIDIARQTAR 119
Query: 402 GMNYLHQNNIIHRDLKAANLLMDENEVSLLLSLCLFTVSILFCG 445
GM+YLH +IIHRDLK+ N+ + E+ + L TV + G
Sbjct: 120 GMDYLHAKSIIHRDLKSNNIFLHEDNTVKIGDFGLATVKSRWSG 163
>pdb|2Y4I|B Chain B, Ksr2-Mek1 Heterodimer
Length = 319
Score = 117 bits (293), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 67/198 (33%), Positives = 104/198 (52%), Gaps = 5/198 (2%)
Query: 287 WEIDPKHLKFGSKVASGSYGDLYRGTYCSQDVAIKVLKPERINSDMQKEFAQEVFIMRKV 346
W+I + L+ G + G +G +Y G + +VAI+++ ER N D K F +EV R+
Sbjct: 28 WDIPFEQLEIGELIGKGRFGQVYHGRWHG-EVAIRLIDIERDNEDQLKAFKREVMAYRQT 86
Query: 347 RHKNVVQFIGACTKPPSLCIVTEFMSGGSVYDYLHKLKGVFKLPSLLKVAIDVSKGMNYL 406
RH+NVV F+GAC PP L I+T G ++Y + K V + ++A ++ KGM YL
Sbjct: 87 RHENVVLFMGACMSPPHLAIITSLCKGRTLYSVVRDAKIVLDVNKTRQIAQEIVKGMGYL 146
Query: 407 HQNNIIHRDLKAANLLMDENEVSLLLSLCLFTVSILFCGKGRELISLFLGNDVLLQFGTY 466
H I+H+DLK+ N+ D +V ++ LF++S + GR L + N L
Sbjct: 147 HAKGILHKDLKSKNVFYDNGKV-VITDFGLFSISGVLQA-GRREDKLRIQNGWLCHLAPE 204
Query: 467 WIIFRRSSCDKKNSDAPF 484
I R+ S D + PF
Sbjct: 205 --IIRQLSPDTEEDKLPF 220
>pdb|3II5|A Chain A, The Complex Of Wild-Type B-Raf With Pyrazolo Pyrimidine
Inhibitor
pdb|3II5|B Chain B, The Complex Of Wild-Type B-Raf With Pyrazolo Pyrimidine
Inhibitor
Length = 306
Score = 117 bits (292), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 60/164 (36%), Positives = 96/164 (58%), Gaps = 2/164 (1%)
Query: 282 DGTDVWEIDPKHLKFGSKVASGSYGDLYRGTYCSQDVAIKVLKPERINSDMQKEFAQEVF 341
D +D WEI + G ++ SGS+G +Y+G + DVA+K+L + F EV
Sbjct: 25 DSSDDWEIPDGQITVGQRIGSGSFGTVYKGKWHG-DVAVKMLNVTAPTPQQLQAFKNEVG 83
Query: 342 IMRKVRHKNVVQFIGACTKPPSLCIVTEFMSGGSVYDYLHKLKGVFKLPSLLKVAIDVSK 401
++RK RH N++ F+G TKP L IVT++ G S+Y +LH ++ F++ L+ +A ++
Sbjct: 84 VLRKTRHVNILLFMGYSTKP-QLAIVTQWCEGSSLYHHLHIIETKFEMIKLIDIARQTAQ 142
Query: 402 GMNYLHQNNIIHRDLKAANLLMDENEVSLLLSLCLFTVSILFCG 445
GM+YLH +IIHRDLK+ N+ + E+ + L TV + G
Sbjct: 143 GMDYLHAKSIIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSG 186
>pdb|3D4Q|A Chain A, Pyrazole-Based Inhibitors Of B-Raf Kinase
pdb|3D4Q|B Chain B, Pyrazole-Based Inhibitors Of B-Raf Kinase
pdb|3PSB|A Chain A, Furo[2,3-C]pyridine-Based Indanone Oximes As Potent And
Selective B- Raf Inhibitors
pdb|3PSB|B Chain B, Furo[2,3-C]pyridine-Based Indanone Oximes As Potent And
Selective B- Raf Inhibitors
pdb|3PPJ|A Chain A, Human B-Raf Kinase In Complex With A Furopyridine
Inhibitor
pdb|3PPJ|B Chain B, Human B-Raf Kinase In Complex With A Furopyridine
Inhibitor
pdb|3PPK|A Chain A, Human B-Raf Kinase In Complex With A Non-Oxime
Furopyridine Inhibitor
pdb|3PPK|B Chain B, Human B-Raf Kinase In Complex With A Non-Oxime
Furopyridine Inhibitor
pdb|3PRF|A Chain A, Crystal Structure Of Human B-Raf Kinase Domain In Complex
With A Non- Oxime Furopyridine Inhibitor
pdb|3PRF|B Chain B, Crystal Structure Of Human B-Raf Kinase Domain In Complex
With A Non- Oxime Furopyridine Inhibitor
pdb|3PRI|A Chain A, Crystal Structure Of Human B-Raf Kinase In Complex With A
Non-Oxime Furopyridine Inhibitor
pdb|3PRI|B Chain B, Crystal Structure Of Human B-Raf Kinase In Complex With A
Non-Oxime Furopyridine Inhibitor
pdb|3Q4C|A Chain A, Crystal Structure Of Wild Type Braf Kinase Domain In
Complex With Organometallic Inhibitor Cns292
pdb|3Q4C|B Chain B, Crystal Structure Of Wild Type Braf Kinase Domain In
Complex With Organometallic Inhibitor Cns292
pdb|3PSD|A Chain A, Non-Oxime Pyrazole Based Inhibitors Of B-Raf Kinase
pdb|3PSD|B Chain B, Non-Oxime Pyrazole Based Inhibitors Of B-Raf Kinase
pdb|3SKC|A Chain A, Human B-Raf Kinase In Complex With An Amide Linked
Pyrazolopyridine Inhibitor
pdb|3SKC|B Chain B, Human B-Raf Kinase In Complex With An Amide Linked
Pyrazolopyridine Inhibitor
pdb|3TV4|A Chain A, Human B-Raf Kinase Domain In Complex With An Bromopyridine
Benzamide Inhibitor
pdb|3TV4|B Chain B, Human B-Raf Kinase Domain In Complex With An Bromopyridine
Benzamide Inhibitor
pdb|3TV6|A Chain A, Human B-Raf Kinase Domain In Complex With A
Methoxypyrazolopyridinyl Benzamide Inhibitor
pdb|3TV6|B Chain B, Human B-Raf Kinase Domain In Complex With A
Methoxypyrazolopyridinyl Benzamide Inhibitor
pdb|4E26|A Chain A, Braf In Complex With An Organic Inhibitor 7898734
pdb|4E26|B Chain B, Braf In Complex With An Organic Inhibitor 7898734
pdb|4E4X|A Chain A, Crystal Structure Of B-Raf Kinase Domain In Complex With A
Dihydropyrido[2,3-D]pyrimidinone-Based Inhibitor
pdb|4E4X|B Chain B, Crystal Structure Of B-Raf Kinase Domain In Complex With A
Dihydropyrido[2,3-D]pyrimidinone-Based Inhibitor
pdb|4G9C|A Chain A, Human B-Raf Kinase Domain Bound To A Type Ii
Pyrazolopyridine Inhibitor
pdb|4G9C|B Chain B, Human B-Raf Kinase Domain Bound To A Type Ii
Pyrazolopyridine Inhibitor
Length = 307
Score = 117 bits (292), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 60/164 (36%), Positives = 96/164 (58%), Gaps = 2/164 (1%)
Query: 282 DGTDVWEIDPKHLKFGSKVASGSYGDLYRGTYCSQDVAIKVLKPERINSDMQKEFAQEVF 341
D +D WEI + G ++ SGS+G +Y+G + DVA+K+L + F EV
Sbjct: 26 DSSDDWEIPDGQITVGQRIGSGSFGTVYKGKWHG-DVAVKMLNVTAPTPQQLQAFKNEVG 84
Query: 342 IMRKVRHKNVVQFIGACTKPPSLCIVTEFMSGGSVYDYLHKLKGVFKLPSLLKVAIDVSK 401
++RK RH N++ F+G TKP L IVT++ G S+Y +LH ++ F++ L+ +A ++
Sbjct: 85 VLRKTRHVNILLFMGYSTKP-QLAIVTQWCEGSSLYHHLHIIETKFEMIKLIDIARQTAQ 143
Query: 402 GMNYLHQNNIIHRDLKAANLLMDENEVSLLLSLCLFTVSILFCG 445
GM+YLH +IIHRDLK+ N+ + E+ + L TV + G
Sbjct: 144 GMDYLHAKSIIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSG 187
>pdb|4DBN|A Chain A, Crystal Structure Of The Kinase Domain Of Human B-Raf With
A [1, 3]thiazolo[5,4-B]pyridine Derivative
pdb|4DBN|B Chain B, Crystal Structure Of The Kinase Domain Of Human B-Raf With
A [1, 3]thiazolo[5,4-B]pyridine Derivative
Length = 284
Score = 117 bits (292), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 60/165 (36%), Positives = 97/165 (58%), Gaps = 2/165 (1%)
Query: 281 NDGTDVWEIDPKHLKFGSKVASGSYGDLYRGTYCSQDVAIKVLKPERINSDMQKEFAQEV 340
+D +D WEI + G ++ SGS+G +Y+G + DVA+K+L + F EV
Sbjct: 2 SDSSDDWEIPDGQITVGQRIGSGSFGTVYKGKWHG-DVAVKMLNVTAPTPQQLQAFKNEV 60
Query: 341 FIMRKVRHKNVVQFIGACTKPPSLCIVTEFMSGGSVYDYLHKLKGVFKLPSLLKVAIDVS 400
++RK RH N++ F+G TKP L IVT++ G S+Y +LH ++ F++ L+ +A +
Sbjct: 61 GVLRKTRHVNILLFMGYSTKP-QLAIVTQWCEGSSLYHHLHIIETKFEMIKLIDIARQTA 119
Query: 401 KGMNYLHQNNIIHRDLKAANLLMDENEVSLLLSLCLFTVSILFCG 445
+GM+YLH +IIHRDLK+ N+ + E+ + L TV + G
Sbjct: 120 QGMDYLHAKSIIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSG 164
>pdb|2FB8|A Chain A, Structure Of The B-Raf Kinase Domain Bound To Sb-590885
pdb|2FB8|B Chain B, Structure Of The B-Raf Kinase Domain Bound To Sb-590885
Length = 281
Score = 116 bits (291), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 60/165 (36%), Positives = 97/165 (58%), Gaps = 2/165 (1%)
Query: 281 NDGTDVWEIDPKHLKFGSKVASGSYGDLYRGTYCSQDVAIKVLKPERINSDMQKEFAQEV 340
+D +D WEI + G ++ SGS+G +Y+G + DVA+K+L + F EV
Sbjct: 2 SDSSDDWEIPDGQITVGQRIGSGSFGTVYKGKWHG-DVAVKMLNVTAPTPQQLQAFKNEV 60
Query: 341 FIMRKVRHKNVVQFIGACTKPPSLCIVTEFMSGGSVYDYLHKLKGVFKLPSLLKVAIDVS 400
++RK RH N++ F+G TKP L IVT++ G S+Y +LH ++ F++ L+ +A +
Sbjct: 61 GVLRKTRHVNILLFMGYSTKP-QLAIVTQWCEGSSLYHHLHIIETKFEMIKLIDIARQTA 119
Query: 401 KGMNYLHQNNIIHRDLKAANLLMDENEVSLLLSLCLFTVSILFCG 445
+GM+YLH +IIHRDLK+ N+ + E+ + L TV + G
Sbjct: 120 QGMDYLHAKSIIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSG 164
>pdb|4FK3|A Chain A, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx3203
pdb|4FK3|B Chain B, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx3203
Length = 292
Score = 115 bits (289), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 59/164 (35%), Positives = 94/164 (57%), Gaps = 2/164 (1%)
Query: 282 DGTDVWEIDPKHLKFGSKVASGSYGDLYRGTYCSQDVAIKVLKPERINSDMQKEFAQEVF 341
D +D WEI + G ++ SGS+G +Y+G + DVA+K+L + F EV
Sbjct: 14 DSSDDWEIPDGQITVGQRIGSGSFGTVYKGKWHG-DVAVKMLNVTAPTPQQLQAFKNEVG 72
Query: 342 IMRKVRHKNVVQFIGACTKPPSLCIVTEFMSGGSVYDYLHKLKGVFKLPSLLKVAIDVSK 401
++RK RH N++ F+G TKP L IVT++ G S+Y +LH + F++ L+ +A ++
Sbjct: 73 VLRKTRHVNILLFMGYSTKP-QLAIVTQWCEGSSLYHHLHASETKFEMKKLIDIARQTAR 131
Query: 402 GMNYLHQNNIIHRDLKAANLLMDENEVSLLLSLCLFTVSILFCG 445
GM+YLH +IIHRDLK+ N+ + E+ + L T + G
Sbjct: 132 GMDYLHAKSIIHRDLKSNNIFLHEDNTVKIGDFGLATEKSRWSG 175
>pdb|4G9R|A Chain A, B-Raf V600e Kinase Domain Bound To A Type Ii
Dihydroquinazoline Inhibitor
pdb|4G9R|B Chain B, B-Raf V600e Kinase Domain Bound To A Type Ii
Dihydroquinazoline Inhibitor
Length = 307
Score = 115 bits (288), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 56/145 (38%), Positives = 90/145 (62%), Gaps = 2/145 (1%)
Query: 282 DGTDVWEIDPKHLKFGSKVASGSYGDLYRGTYCSQDVAIKVLKPERINSDMQKEFAQEVF 341
D +D WEI + G ++ SGS+G +Y+G + DVA+K+L + F EV
Sbjct: 26 DSSDDWEIPDGQITVGQRIGSGSFGTVYKGKWHG-DVAVKMLNVTAPTPQQLQAFKNEVG 84
Query: 342 IMRKVRHKNVVQFIGACTKPPSLCIVTEFMSGGSVYDYLHKLKGVFKLPSLLKVAIDVSK 401
++RK RH N++ F+G TKP L IVT++ G S+Y +LH ++ F++ L+ +A ++
Sbjct: 85 VLRKTRHVNILLFMGYSTKP-QLAIVTQWCEGSSLYHHLHIIETKFEMIKLIDIARQTAQ 143
Query: 402 GMNYLHQNNIIHRDLKAANLLMDEN 426
GM+YLH +IIHRDLK+ N+ + E+
Sbjct: 144 GMDYLHAKSIIHRDLKSNNIFLHED 168
>pdb|3IDP|A Chain A, B-Raf V600e Kinase Domain In Complex With An
Aminoisoquinoline Inhibitor
pdb|3IDP|B Chain B, B-Raf V600e Kinase Domain In Complex With An
Aminoisoquinoline Inhibitor
Length = 300
Score = 115 bits (288), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 56/145 (38%), Positives = 90/145 (62%), Gaps = 2/145 (1%)
Query: 282 DGTDVWEIDPKHLKFGSKVASGSYGDLYRGTYCSQDVAIKVLKPERINSDMQKEFAQEVF 341
D +D WEI + G ++ SGS+G +Y+G + DVA+K+L + F EV
Sbjct: 18 DSSDDWEIPDGQITVGQRIGSGSFGTVYKGKWHG-DVAVKMLNVTAPTPQQLQAFKNEVG 76
Query: 342 IMRKVRHKNVVQFIGACTKPPSLCIVTEFMSGGSVYDYLHKLKGVFKLPSLLKVAIDVSK 401
++RK RH N++ F+G TKP L IVT++ G S+Y +LH ++ F++ L+ +A ++
Sbjct: 77 VLRKTRHVNILLFMGYSTKP-QLAIVTQWCEGSSLYHHLHIIETKFEMIKLIDIARQTAQ 135
Query: 402 GMNYLHQNNIIHRDLKAANLLMDEN 426
GM+YLH +IIHRDLK+ N+ + E+
Sbjct: 136 GMDYLHAKSIIHRDLKSNNIFLHED 160
>pdb|3Q96|A Chain A, B-Raf Kinase Domain In Complex With A
Tetrahydronaphthalene Inhibitor
pdb|3Q96|B Chain B, B-Raf Kinase Domain In Complex With A
Tetrahydronaphthalene Inhibitor
Length = 282
Score = 114 bits (285), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 59/162 (36%), Positives = 95/162 (58%), Gaps = 2/162 (1%)
Query: 284 TDVWEIDPKHLKFGSKVASGSYGDLYRGTYCSQDVAIKVLKPERINSDMQKEFAQEVFIM 343
+D WEI + G ++ SGS+G +Y+G + DVA+K+L + F EV ++
Sbjct: 2 SDDWEIPDGQITVGQRIGSGSFGTVYKGKWHG-DVAVKMLNVTAPTPQQLQAFKNEVGVL 60
Query: 344 RKVRHKNVVQFIGACTKPPSLCIVTEFMSGGSVYDYLHKLKGVFKLPSLLKVAIDVSKGM 403
RK RH N++ F+G TKP L IVT++ G S+Y +LH ++ F++ L+ +A ++GM
Sbjct: 61 RKTRHVNILLFMGYSTKP-QLAIVTQWCEGSSLYHHLHIIETKFEMIKLIDIARQTAQGM 119
Query: 404 NYLHQNNIIHRDLKAANLLMDENEVSLLLSLCLFTVSILFCG 445
+YLH +IIHRDLK+ N+ + E+ + L TV + G
Sbjct: 120 DYLHAKSIIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSG 161
>pdb|3T9T|A Chain A, Crystal Structure Of Btk Mutant (F435t,K596r) Complexed
With Imidazo[1,5-A]quinoxaline
Length = 267
Score = 114 bits (285), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 55/143 (38%), Positives = 88/143 (61%), Gaps = 4/143 (2%)
Query: 287 WEIDPKHLKFGSKVASGSYGDLYRGTYCSQD-VAIKVLKPERINSDMQKEFAQEVFIMRK 345
W IDP L F ++ SG +G ++ G + ++D VAIK ++ ++ +++F +E +M K
Sbjct: 3 WVIDPSELTFVQEIGSGQFGLVHLGYWLNKDKVAIKTIREGAMS---EEDFIEEAEVMMK 59
Query: 346 VRHKNVVQFIGACTKPPSLCIVTEFMSGGSVYDYLHKLKGVFKLPSLLKVAIDVSKGMNY 405
+ H +VQ G C + +C+VTEFM G + DYL +G+F +LL + +DV +GM Y
Sbjct: 60 LSHPKLVQLYGVCLEQAPICLVTEFMEHGCLSDYLRTQRGLFAAETLLGMCLDVCEGMAY 119
Query: 406 LHQNNIIHRDLKAANLLMDENEV 428
L + +IHRDL A N L+ EN+V
Sbjct: 120 LEEACVIHRDLAARNCLVGENQV 142
>pdb|3OG7|A Chain A, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx4032
pdb|3OG7|B Chain B, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx4032
Length = 289
Score = 114 bits (284), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 58/164 (35%), Positives = 92/164 (56%), Gaps = 2/164 (1%)
Query: 282 DGTDVWEIDPKHLKFGSKVASGSYGDLYRGTYCSQDVAIKVLKPERINSDMQKEFAQEVF 341
D D WEI + G ++ SGS+G +Y+G + DVA+K+L + F EV
Sbjct: 14 DAADDWEIPDGQITVGQRIGSGSFGTVYKGKWHG-DVAVKMLNVTAPTPQQLQAFKNEVG 72
Query: 342 IMRKVRHKNVVQFIGACTKPPSLCIVTEFMSGGSVYDYLHKLKGVFKLPSLLKVAIDVSK 401
++RK RH N++ F+G T P L IVT++ G S+Y +LH + F++ L+ +A ++
Sbjct: 73 VLRKTRHVNILLFMGYST-APQLAIVTQWCEGSSLYHHLHASETKFEMKKLIDIARQTAR 131
Query: 402 GMNYLHQNNIIHRDLKAANLLMDENEVSLLLSLCLFTVSILFCG 445
GM+YLH +IIHRDLK+ N+ + E+ + L T + G
Sbjct: 132 GMDYLHAKSIIHRDLKSNNIFLHEDNTVKIGDFGLATEKSRWSG 175
>pdb|4H58|A Chain A, Braf In Complex With Compound 3
pdb|4H58|B Chain B, Braf In Complex With Compound 3
pdb|4H58|C Chain C, Braf In Complex With Compound 3
Length = 275
Score = 114 bits (284), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 59/161 (36%), Positives = 94/161 (58%), Gaps = 2/161 (1%)
Query: 285 DVWEIDPKHLKFGSKVASGSYGDLYRGTYCSQDVAIKVLKPERINSDMQKEFAQEVFIMR 344
D WEI + G ++ SGS+G +Y+G + DVA+K+L + F EV ++R
Sbjct: 1 DDWEIPDGQITVGQRIGSGSFGTVYKGKWHG-DVAVKMLNVTAPTPQQLQAFKNEVGVLR 59
Query: 345 KVRHKNVVQFIGACTKPPSLCIVTEFMSGGSVYDYLHKLKGVFKLPSLLKVAIDVSKGMN 404
K RH N++ F+G TKP L IVT++ G S+Y +LH ++ F++ L+ +A ++GM+
Sbjct: 60 KTRHVNILLFMGYSTKP-QLAIVTQWCEGSSLYHHLHIIETKFEMIKLIDIARQTAQGMD 118
Query: 405 YLHQNNIIHRDLKAANLLMDENEVSLLLSLCLFTVSILFCG 445
YLH +IIHRDLK+ N+ + E+ + L TV + G
Sbjct: 119 YLHAKSIIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSG 159
>pdb|4HCT|A Chain A, Crystal Structure Of Itk In Complex With Compound 52
pdb|4HCU|A Chain A, Crystal Structure Of Itk In Complext With Compound 40
pdb|4HCV|A Chain A, Crystal Structure Of Itk In Complex With Compound 53
Length = 269
Score = 113 bits (282), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 55/147 (37%), Positives = 89/147 (60%), Gaps = 4/147 (2%)
Query: 283 GTDVWEIDPKHLKFGSKVASGSYGDLYRGTYCSQD-VAIKVLKPERINSDMQKEFAQEVF 341
G+ W IDP L F ++ SG +G ++ G + ++D VAIK ++ ++ +++F +E
Sbjct: 1 GSGKWVIDPSELTFVQEIGSGQFGLVHLGYWLNKDKVAIKTIREGAMS---EEDFIEEAE 57
Query: 342 IMRKVRHKNVVQFIGACTKPPSLCIVTEFMSGGSVYDYLHKLKGVFKLPSLLKVAIDVSK 401
+M K+ H +VQ G C + +C+V EFM G + DYL +G+F +LL + +DV +
Sbjct: 58 VMMKLSHPKLVQLYGVCLEQAPICLVFEFMEHGCLSDYLRTQRGLFAAETLLGMCLDVCE 117
Query: 402 GMNYLHQNNIIHRDLKAANLLMDENEV 428
GM YL + +IHRDL A N L+ EN+V
Sbjct: 118 GMAYLEEACVIHRDLAARNCLVGENQV 144
>pdb|1Y57|A Chain A, Structure Of Unphosphorylated C-Src In Complex With An
Inhibitor
Length = 452
Score = 112 bits (281), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 64/177 (36%), Positives = 104/177 (58%), Gaps = 20/177 (11%)
Query: 256 HRSSS--PTSEPEDTGMKSHPYHLKIPNDGTDVWEIDPKHLKFGSKVASGSYGDLYRGTY 313
HR ++ PTS+P+ G+ D WEI + L+ K+ G +G+++ GT+
Sbjct: 158 HRLTTVCPTSKPQTQGL------------AKDAWEIPRESLRLEVKLGQGCFGEVWMGTW 205
Query: 314 -CSQDVAIKVLKPERINSDMQKEFAQEVFIMRKVRHKNVVQFIGACTKPPSLCIVTEFMS 372
+ VAIK LKP ++ + F QE +M+K+RH+ +VQ ++ P + IVTE+MS
Sbjct: 206 NGTTRVAIKTLKPGTMSPEA---FLQEAQVMKKLRHEKLVQLYAVVSEEP-IYIVTEYMS 261
Query: 373 GGSVYDYLHKLKGVF-KLPSLLKVAIDVSKGMNYLHQNNIIHRDLKAANLLMDENEV 428
GS+ D+L G + +LP L+ +A ++ GM Y+ + N +HRDL+AAN+L+ EN V
Sbjct: 262 KGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAYVERMNYVHRDLRAANILVGENLV 318
>pdb|1UWJ|A Chain A, The Complex Of Mutant V599e B-raf And Bay439006
pdb|1UWJ|B Chain B, The Complex Of Mutant V599e B-raf And Bay439006
Length = 276
Score = 112 bits (281), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 55/142 (38%), Positives = 88/142 (61%), Gaps = 2/142 (1%)
Query: 285 DVWEIDPKHLKFGSKVASGSYGDLYRGTYCSQDVAIKVLKPERINSDMQKEFAQEVFIMR 344
D WEI + G ++ SGS+G +Y+G + DVA+K+L + F EV ++R
Sbjct: 1 DDWEIPDGQITVGQRIGSGSFGTVYKGKWHG-DVAVKMLNVTAPTPQQLQAFKNEVGVLR 59
Query: 345 KVRHKNVVQFIGACTKPPSLCIVTEFMSGGSVYDYLHKLKGVFKLPSLLKVAIDVSKGMN 404
K RH N++ F+G TKP L IVT++ G S+Y +LH ++ F++ L+ +A ++GM+
Sbjct: 60 KTRHVNILLFMGYSTKP-QLAIVTQWCEGSSLYHHLHIIETKFEMIKLIDIARQTAQGMD 118
Query: 405 YLHQNNIIHRDLKAANLLMDEN 426
YLH +IIHRDLK+ N+ + E+
Sbjct: 119 YLHAKSIIHRDLKSNNIFLHED 140
>pdb|1FMK|A Chain A, Crystal Structure Of Human Tyrosine-Protein Kinase C-Src
pdb|2SRC|A Chain A, Crystal Structure Of Human Tyrosine-protein Kinase C-src,
In Complex With Amp-pnp
Length = 452
Score = 112 bits (281), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 64/177 (36%), Positives = 104/177 (58%), Gaps = 20/177 (11%)
Query: 256 HRSSS--PTSEPEDTGMKSHPYHLKIPNDGTDVWEIDPKHLKFGSKVASGSYGDLYRGTY 313
HR ++ PTS+P+ G+ D WEI + L+ K+ G +G+++ GT+
Sbjct: 158 HRLTTVCPTSKPQTQGL------------AKDAWEIPRESLRLEVKLGQGCFGEVWMGTW 205
Query: 314 -CSQDVAIKVLKPERINSDMQKEFAQEVFIMRKVRHKNVVQFIGACTKPPSLCIVTEFMS 372
+ VAIK LKP ++ + F QE +M+K+RH+ +VQ ++ P + IVTE+MS
Sbjct: 206 NGTTRVAIKTLKPGTMSPEA---FLQEAQVMKKLRHEKLVQLYAVVSEEP-IYIVTEYMS 261
Query: 373 GGSVYDYLHKLKGVF-KLPSLLKVAIDVSKGMNYLHQNNIIHRDLKAANLLMDENEV 428
GS+ D+L G + +LP L+ +A ++ GM Y+ + N +HRDL+AAN+L+ EN V
Sbjct: 262 KGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAYVERMNYVHRDLRAANILVGENLV 318
>pdb|3OMV|A Chain A, Crystal Structure Of C-Raf (Raf-1)
pdb|3OMV|B Chain B, Crystal Structure Of C-Raf (Raf-1)
Length = 307
Score = 112 bits (280), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 58/164 (35%), Positives = 96/164 (58%), Gaps = 2/164 (1%)
Query: 282 DGTDVWEIDPKHLKFGSKVASGSYGDLYRGTYCSQDVAIKVLKPERINSDMQKEFAQEVF 341
D + WEI+ + +++ SGS+G +Y+G + DVA+K+LK + + F EV
Sbjct: 26 DSSYYWEIEASEVMLSTRIGSGSFGTVYKGKWHG-DVAVKILKVVDPTPEQFQAFRNEVA 84
Query: 342 IMRKVRHKNVVQFIGACTKPPSLCIVTEFMSGGSVYDYLHKLKGVFKLPSLLKVAIDVSK 401
++RK RH N++ F+G TK +L IVT++ G S+Y +LH + F++ L+ +A ++
Sbjct: 85 VLRKTRHVNILLFMGYMTKD-NLAIVTQWCEGSSLYKHLHVQETKFQMFQLIDIARQTAQ 143
Query: 402 GMNYLHQNNIIHRDLKAANLLMDENEVSLLLSLCLFTVSILFCG 445
GM+YLH NIIHRD+K+ N+ + E + L TV + G
Sbjct: 144 GMDYLHAKNIIHRDMKSNNIFLHEGLTVKIGDFGLATVKSRWSG 187
>pdb|2H8H|A Chain A, Src Kinase In Complex With A Quinazoline Inhibitor
Length = 535
Score = 112 bits (280), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 64/177 (36%), Positives = 104/177 (58%), Gaps = 20/177 (11%)
Query: 256 HRSSS--PTSEPEDTGMKSHPYHLKIPNDGTDVWEIDPKHLKFGSKVASGSYGDLYRGTY 313
HR ++ PTS+P+ G+ D WEI + L+ K+ G +G+++ GT+
Sbjct: 241 HRLTTVCPTSKPQTQGL------------AKDAWEIPRESLRLEVKLGQGCFGEVWMGTW 288
Query: 314 -CSQDVAIKVLKPERINSDMQKEFAQEVFIMRKVRHKNVVQFIGACTKPPSLCIVTEFMS 372
+ VAIK LKP ++ + F QE +M+K+RH+ +VQ ++ P + IVTE+MS
Sbjct: 289 NGTTRVAIKTLKPGTMSPEA---FLQEAQVMKKLRHEKLVQLYAVVSEEP-IYIVTEYMS 344
Query: 373 GGSVYDYLHKLKGVF-KLPSLLKVAIDVSKGMNYLHQNNIIHRDLKAANLLMDENEV 428
GS+ D+L G + +LP L+ +A ++ GM Y+ + N +HRDL+AAN+L+ EN V
Sbjct: 345 KGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAYVERMNYVHRDLRAANILVGENLV 401
>pdb|1UWH|A Chain A, The Complex Of Wild Type B-Raf And Bay439006
pdb|1UWH|B Chain B, The Complex Of Wild Type B-Raf And Bay439006
Length = 276
Score = 111 bits (278), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 58/161 (36%), Positives = 93/161 (57%), Gaps = 2/161 (1%)
Query: 285 DVWEIDPKHLKFGSKVASGSYGDLYRGTYCSQDVAIKVLKPERINSDMQKEFAQEVFIMR 344
D WEI + G ++ SGS+G +Y+G + DVA+K+L + F EV ++R
Sbjct: 1 DDWEIPDGQITVGQRIGSGSFGTVYKGKWHG-DVAVKMLNVTAPTPQQLQAFKNEVGVLR 59
Query: 345 KVRHKNVVQFIGACTKPPSLCIVTEFMSGGSVYDYLHKLKGVFKLPSLLKVAIDVSKGMN 404
K RH N++ F+G T P L IVT++ G S+Y +LH ++ F++ L+ +A ++GM+
Sbjct: 60 KTRHVNILLFMGYST-APQLAIVTQWCEGSSLYHHLHIIETKFEMIKLIDIARQTAQGMD 118
Query: 405 YLHQNNIIHRDLKAANLLMDENEVSLLLSLCLFTVSILFCG 445
YLH +IIHRDLK+ N+ + E+ + L TV + G
Sbjct: 119 YLHAKSIIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSG 159
>pdb|2PTK|A Chain A, Chicken Src Tyrosine Kinase
Length = 453
Score = 111 bits (278), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 62/170 (36%), Positives = 100/170 (58%), Gaps = 18/170 (10%)
Query: 261 PTSEPEDTGMKSHPYHLKIPNDGTDVWEIDPKHLKFGSKVASGSYGDLYRGTY-CSQDVA 319
PTS+P+ G+ D WEI + L+ K+ G +G+++ GT+ + VA
Sbjct: 166 PTSKPQTQGL------------AKDAWEIPRESLRLEVKLGQGCFGEVWMGTWNGTTRVA 213
Query: 320 IKVLKPERINSDMQKEFAQEVFIMRKVRHKNVVQFIGACTKPPSLCIVTEFMSGGSVYDY 379
IK LKP ++ + F QE +M+K+RH+ +VQ ++ P + IVTE+MS GS+ D+
Sbjct: 214 IKTLKPGNMSPEA---FLQEAQVMKKLRHEKLVQLYAVVSEEP-IYIVTEYMSKGSLLDF 269
Query: 380 LHKLKGVF-KLPSLLKVAIDVSKGMNYLHQNNIIHRDLKAANLLMDENEV 428
L G + +LP L+ +A ++ GM Y+ + N +HRDL+AAN+L+ EN V
Sbjct: 270 LKGEMGKYLRLPQLVDMAAQIASGMAYVERMNYVHRDLRAANILVGENLV 319
>pdb|3OEZ|A Chain A, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain Complexed With Imatinib
pdb|3OEZ|B Chain B, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain Complexed With Imatinib
pdb|3OF0|A Chain A, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain
pdb|3OF0|B Chain B, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain
pdb|3QLF|A Chain A, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Pyrazolopyrimidine
5
pdb|3QLF|B Chain B, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Pyrazolopyrimidine
5
pdb|3QLG|A Chain A, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Dasatinib
pdb|3QLG|B Chain B, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Dasatinib
Length = 286
Score = 111 bits (277), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 58/155 (37%), Positives = 95/155 (61%), Gaps = 6/155 (3%)
Query: 276 HLKIPNDGTDVWEIDPKHLKFGSKVASGSYGDLYRGTY-CSQDVAIKVLKPERINSDMQK 334
H++ D WEI + L+ K+ G +G+++ GT+ + VAIK LKP ++ +
Sbjct: 2 HMQTQGLAKDAWEIPRESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEA-- 59
Query: 335 EFAQEVFIMRKVRHKNVVQFIGACTKPPSLCIVTEFMSGGSVYDYLHKLKGVF-KLPSLL 393
F QE +M+K+RH+ +VQ ++ P + IVTE+MS GS+ D+L G + +LP L+
Sbjct: 60 -FLQEAQVMKKIRHEKLVQLYAVVSEEP-IYIVTEYMSKGSLLDFLKGEMGKYLRLPQLV 117
Query: 394 KVAIDVSKGMNYLHQNNIIHRDLKAANLLMDENEV 428
+A ++ GM Y+ + N +HRDL+AAN+L+ EN V
Sbjct: 118 DMAAQIASGMAYVERMNYVHRDLRAANILVGENLV 152
>pdb|2OIQ|A Chain A, Crystal Structure Of Chicken C-Src Kinase Domain In
Complex With The Cancer Drug Imatinib.
pdb|2OIQ|B Chain B, Crystal Structure Of Chicken C-Src Kinase Domain In
Complex With The Cancer Drug Imatinib.
pdb|3D7T|B Chain B, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3DQX|A Chain A, Chicken C-Src Kinase Domain In Complex With Atpgs
pdb|3DQX|B Chain B, Chicken C-Src Kinase Domain In Complex With Atpgs
pdb|3EN4|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp121, A Multitargeted
Kinase Inhibitor
pdb|3EN4|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp121, A Multitargeted
Kinase Inhibitor
pdb|3EN5|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp494, A Multitargeted
Kinase Inhibitor
pdb|3EN5|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp494, A Multitargeted
Kinase Inhibitor
pdb|3EN6|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp102, A Multitargeted
Kinase Inhibitor
pdb|3EN6|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp102, A Multitargeted
Kinase Inhibitor
pdb|3EN7|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With S1, A Multitargeted Kinase
Inhibitor
pdb|3EN7|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With S1, A Multitargeted Kinase
Inhibitor
pdb|3EL7|A Chain A, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 3
pdb|3EL8|A Chain A, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 5
pdb|3EL8|B Chain B, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 5
pdb|3F6X|A Chain A, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|B Chain B, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|C Chain C, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|D Chain D, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3G6G|A Chain A, Equally Potent Inhibition Of C-Src And Abl By Compounds
That Recognize Inactive Kinase Conformations
pdb|3G6G|B Chain B, Equally Potent Inhibition Of C-Src And Abl By Compounds
That Recognize Inactive Kinase Conformations
pdb|4AGW|A Chain A, Discovery Of A Small Molecule Type Ii Inhibitor Of Wild-
Type And Gatekeeper Mutants Of Bcr-Abl, Pdgfralpha, Kit,
And Src Kinases
pdb|4AGW|B Chain B, Discovery Of A Small Molecule Type Ii Inhibitor Of Wild-
Type And Gatekeeper Mutants Of Bcr-Abl, Pdgfralpha, Kit,
And Src Kinases
pdb|3UQF|A Chain A, C-Src Kinase Domain In Complex With Bki Rm-1-89
pdb|3UQF|B Chain B, C-Src Kinase Domain In Complex With Bki Rm-1-89
pdb|3UQG|A Chain A, C-Src Kinase Domain In Complex With Bumpless Bki Analog
Uw1243
pdb|3UQG|B Chain B, C-Src Kinase Domain In Complex With Bumpless Bki Analog
Uw1243
pdb|4DGG|A Chain A, C-Src Kinase Domain In Complex With Rm-1-176
pdb|4DGG|B Chain B, C-Src Kinase Domain In Complex With Rm-1-176
Length = 286
Score = 110 bits (275), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 58/155 (37%), Positives = 95/155 (61%), Gaps = 6/155 (3%)
Query: 276 HLKIPNDGTDVWEIDPKHLKFGSKVASGSYGDLYRGTY-CSQDVAIKVLKPERINSDMQK 334
H++ D WEI + L+ K+ G +G+++ GT+ + VAIK LKP ++ +
Sbjct: 2 HMQTQGLAKDAWEIPRESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEA-- 59
Query: 335 EFAQEVFIMRKVRHKNVVQFIGACTKPPSLCIVTEFMSGGSVYDYLHKLKGVF-KLPSLL 393
F QE +M+K+RH+ +VQ ++ P + IVTE+MS GS+ D+L G + +LP L+
Sbjct: 60 -FLQEAQVMKKLRHEKLVQLYAVVSEEP-IYIVTEYMSKGSLLDFLKGEMGKYLRLPQLV 117
Query: 394 KVAIDVSKGMNYLHQNNIIHRDLKAANLLMDENEV 428
+A ++ GM Y+ + N +HRDL+AAN+L+ EN V
Sbjct: 118 DMAAQIASGMAYVERMNYVHRDLRAANILVGENLV 152
>pdb|1KSW|A Chain A, Structure Of Human C-Src Tyrosine Kinase (Thr338gly
Mutant) In Complex With N6-Benzyl Adp
Length = 452
Score = 110 bits (274), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 63/177 (35%), Positives = 103/177 (58%), Gaps = 20/177 (11%)
Query: 256 HRSSS--PTSEPEDTGMKSHPYHLKIPNDGTDVWEIDPKHLKFGSKVASGSYGDLYRGTY 313
HR ++ PTS+P+ G+ D WEI + L+ K+ G +G+++ GT+
Sbjct: 158 HRLTTVCPTSKPQTQGL------------AKDAWEIPRESLRLEVKLGQGCFGEVWMGTW 205
Query: 314 -CSQDVAIKVLKPERINSDMQKEFAQEVFIMRKVRHKNVVQFIGACTKPPSLCIVTEFMS 372
+ VAIK LKP ++ + F QE +M+K+RH+ +VQ ++ P + IV E+MS
Sbjct: 206 NGTTRVAIKTLKPGTMSPEA---FLQEAQVMKKLRHEKLVQLYAVVSEEP-IYIVGEYMS 261
Query: 373 GGSVYDYLHKLKGVF-KLPSLLKVAIDVSKGMNYLHQNNIIHRDLKAANLLMDENEV 428
GS+ D+L G + +LP L+ +A ++ GM Y+ + N +HRDL+AAN+L+ EN V
Sbjct: 262 KGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAYVERMNYVHRDLRAANILVGENLV 318
>pdb|3QGW|A Chain A, Crystal Structure Of Itk Kinase Bound To An Inhibitor
pdb|3QGW|B Chain B, Crystal Structure Of Itk Kinase Bound To An Inhibitor
pdb|3QGY|A Chain A, Crystal Structure Of Itk Inhibitor Complex
pdb|3QGY|B Chain B, Crystal Structure Of Itk Inhibitor Complex
Length = 286
Score = 110 bits (274), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 55/141 (39%), Positives = 85/141 (60%), Gaps = 4/141 (2%)
Query: 289 IDPKHLKFGSKVASGSYGDLYRGTYCSQD-VAIKVLKPERINSDMQKEFAQEVFIMRKVR 347
IDP L F ++ SG +G ++ G + ++D VAIK +K ++ D +F +E +M K+
Sbjct: 24 IDPSELTFVQEIGSGQFGLVHLGYWLNKDKVAIKTIKEGSMSED---DFIEEAEVMMKLS 80
Query: 348 HKNVVQFIGACTKPPSLCIVTEFMSGGSVYDYLHKLKGVFKLPSLLKVAIDVSKGMNYLH 407
H +VQ G C + +C+V EFM G + DYL +G+F +LL + +DV +GM YL
Sbjct: 81 HPKLVQLYGVCLEQAPICLVFEFMEHGCLSDYLRTQRGLFAAETLLGMCLDVCEGMAYLE 140
Query: 408 QNNIIHRDLKAANLLMDENEV 428
+ +IHRDL A N L+ EN+V
Sbjct: 141 EACVIHRDLAARNCLVGENQV 161
>pdb|3GEQ|A Chain A, Structural Basis For The Chemical Rescue Of Src Kinase
Activity
pdb|3GEQ|B Chain B, Structural Basis For The Chemical Rescue Of Src Kinase
Activity
Length = 286
Score = 109 bits (272), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 58/155 (37%), Positives = 94/155 (60%), Gaps = 6/155 (3%)
Query: 276 HLKIPNDGTDVWEIDPKHLKFGSKVASGSYGDLYRGTY-CSQDVAIKVLKPERINSDMQK 334
H++ D WEI + L+ K+ G +G+++ GT+ + VAIK LKP ++ +
Sbjct: 2 HMQTQGLAKDAWEIPRESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEA-- 59
Query: 335 EFAQEVFIMRKVRHKNVVQFIGACTKPPSLCIVTEFMSGGSVYDYLHKLKGVF-KLPSLL 393
F QE +M+K+RH+ +VQ ++ P + IVTE+MS GS+ D+L G + +LP L+
Sbjct: 60 -FLQEAQVMKKLRHEKLVQLYAVVSEEP-IYIVTEYMSKGSLLDFLKGEMGKYLRLPQLV 117
Query: 394 KVAIDVSKGMNYLHQNNIIHRDLKAANLLMDENEV 428
+A ++ GM Y+ + N +HRDL AAN+L+ EN V
Sbjct: 118 DMAAQIASGMAYVERMNYVHRDLAAANILVGENLV 152
>pdb|3MIY|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Sunitinib
pdb|3MIY|B Chain B, X-Ray Crystal Structure Of Itk Complexed With Sunitinib
pdb|3MJ1|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Inhibitor
Ro5191614
pdb|3MJ2|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Inhibitor
Bms-509744
Length = 266
Score = 109 bits (272), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 53/141 (37%), Positives = 87/141 (61%), Gaps = 4/141 (2%)
Query: 289 IDPKHLKFGSKVASGSYGDLYRGTYCSQD-VAIKVLKPERINSDMQKEFAQEVFIMRKVR 347
IDP L F ++ SG +G ++ G + ++D VAIK ++ ++ +++F +E +M K+
Sbjct: 4 IDPSELTFVQEIGSGQFGLVHLGYWLNKDKVAIKTIREGAMS---EEDFIEEAEVMMKLS 60
Query: 348 HKNVVQFIGACTKPPSLCIVTEFMSGGSVYDYLHKLKGVFKLPSLLKVAIDVSKGMNYLH 407
H +VQ G C + +C+V EFM G + DYL +G+F +LL + +DV +GM YL
Sbjct: 61 HPKLVQLYGVCLEQAPICLVFEFMEHGCLSDYLRTQRGLFAAETLLGMCLDVCEGMAYLE 120
Query: 408 QNNIIHRDLKAANLLMDENEV 428
+ ++IHRDL A N L+ EN+V
Sbjct: 121 EASVIHRDLAARNCLVGENQV 141
>pdb|1YI6|A Chain A, C-Term Tail Segment Of Human Tyrosine Kinase (258-533)
pdb|1YI6|B Chain B, C-Term Tail Segment Of Human Tyrosine Kinase (258-533)
Length = 276
Score = 108 bits (271), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 57/146 (39%), Positives = 92/146 (63%), Gaps = 6/146 (4%)
Query: 285 DVWEIDPKHLKFGSKVASGSYGDLYRGTY-CSQDVAIKVLKPERINSDMQKEFAQEVFIM 343
D WEI + L+ K+ G +G+++ GT+ + VAIK LKP ++ + F QE +M
Sbjct: 1 DAWEIPRESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEA---FLQEAQVM 57
Query: 344 RKVRHKNVVQFIGACTKPPSLCIVTEFMSGGSVYDYLHKLKGVF-KLPSLLKVAIDVSKG 402
+K+RH+ +VQ ++ P + IVTE+MS GS+ D+L G + +LP L+ +A ++ G
Sbjct: 58 KKLRHEKLVQLYAVVSEEP-IXIVTEYMSKGSLLDFLKGETGKYLRLPQLVDMAAQIASG 116
Query: 403 MNYLHQNNIIHRDLKAANLLMDENEV 428
M Y+ + N +HRDL+AAN+L+ EN V
Sbjct: 117 MAYVERMNYVHRDLRAANILVGENLV 142
>pdb|2HZI|A Chain A, Abl Kinase Domain In Complex With Pd180970
pdb|2HZI|B Chain B, Abl Kinase Domain In Complex With Pd180970
pdb|3CS9|A Chain A, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|B Chain B, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|C Chain C, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|D Chain D, Human Abl Kinase In Complex With Nilotinib
Length = 277
Score = 108 bits (271), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 60/169 (35%), Positives = 94/169 (55%), Gaps = 9/169 (5%)
Query: 280 PNDGTDVWEIDPKHLKFGSKVASGSYGDLYRGTY--CSQDVAIKVLKPERINSDMQKEFA 337
P+ D WE++ + K+ G YG++Y G + S VA+K LK + + + EF
Sbjct: 5 PSPNYDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVE---EFL 61
Query: 338 QEVFIMRKVRHKNVVQFIGACTKPPSLCIVTEFMSGGSVYDYLHKL-KGVFKLPSLLKVA 396
+E +M++++H N+VQ +G CT+ P I+TEFM+ G++ DYL + + LL +A
Sbjct: 62 KEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMA 121
Query: 397 IDVSKGMNYLHQNNIIHRDLKAANLLMDENEVSLLLSLCLFTVSILFCG 445
+S M YL + N IHRDL A N L+ EN L+ + F +S L G
Sbjct: 122 TQISSAMEYLEKKNFIHRDLAARNCLVGENH---LVKVADFGLSRLMTG 167
>pdb|2BDF|A Chain A, Src Kinase In Complex With Inhibitor Ap23451
pdb|2BDF|B Chain B, Src Kinase In Complex With Inhibitor Ap23451
pdb|2BDJ|A Chain A, Src Kinase In Complex With Inhibitor Ap23464
Length = 279
Score = 108 bits (270), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 57/146 (39%), Positives = 92/146 (63%), Gaps = 6/146 (4%)
Query: 285 DVWEIDPKHLKFGSKVASGSYGDLYRGTY-CSQDVAIKVLKPERINSDMQKEFAQEVFIM 343
D WEI + L+ K+ G +G+++ GT+ + VAIK LKP ++ + F QE +M
Sbjct: 4 DAWEIPRESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEA---FLQEAQVM 60
Query: 344 RKVRHKNVVQFIGACTKPPSLCIVTEFMSGGSVYDYLHKLKGVF-KLPSLLKVAIDVSKG 402
+K+RH+ +VQ ++ P + IVTE+MS GS+ D+L G + +LP L+ +A ++ G
Sbjct: 61 KKLRHEKLVQLYAVVSEEP-IYIVTEYMSKGSLLDFLKGETGKYLRLPQLVDMAAQIASG 119
Query: 403 MNYLHQNNIIHRDLKAANLLMDENEV 428
M Y+ + N +HRDL+AAN+L+ EN V
Sbjct: 120 MAYVERMNYVHRDLRAANILVGENLV 145
>pdb|2HWO|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor
pdb|2HWO|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor
pdb|2HWP|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor Pd168393
pdb|2HWP|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor Pd168393
pdb|2QLQ|A Chain A, Crystal Structure Of Src Kinase Domain With Covalent
Inhibitor Rl3
pdb|2QLQ|B Chain B, Crystal Structure Of Src Kinase Domain With Covalent
Inhibitor Rl3
pdb|3F3T|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl38 (Type
Iii)
pdb|3F3T|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl38 (Type
Iii)
pdb|3F3U|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl37 (Type
Iii)
pdb|3F3U|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl37 (Type
Iii)
pdb|3F3V|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl45 (Type
Ii)
pdb|3F3V|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl45 (Type
Ii)
pdb|3G5D|A Chain A, Kinase Domain Of Csrc In Complex With Dasatinib
pdb|3G5D|B Chain B, Kinase Domain Of Csrc In Complex With Dasatinib
pdb|3TZ7|A Chain A, Kinase Domain Of Csrc In Complex With Rl103
pdb|3TZ7|B Chain B, Kinase Domain Of Csrc In Complex With Rl103
pdb|3TZ8|A Chain A, Kinase Domain Of Csrc In Complex With Rl104
pdb|3TZ8|B Chain B, Kinase Domain Of Csrc In Complex With Rl104
pdb|3TZ9|A Chain A, Kinase Domain Of Csrc In Complex With Rl130
pdb|3TZ9|B Chain B, Kinase Domain Of Csrc In Complex With Rl130
Length = 286
Score = 108 bits (270), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 57/156 (36%), Positives = 94/156 (60%), Gaps = 6/156 (3%)
Query: 276 HLKIPNDGTDVWEIDPKHLKFGSKVASGSYGDLYRGTY-CSQDVAIKVLKPERINSDMQK 334
H++ D WEI + L+ K+ G +G+++ GT+ + VAIK LKP ++ +
Sbjct: 2 HMQTQGLAKDAWEIPRESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEA-- 59
Query: 335 EFAQEVFIMRKVRHKNVVQFIGACTKPPSLCIVTEFMSGGSVYDYLHKLKGVF-KLPSLL 393
F QE +M+K+RH+ +VQ ++ P + IVTE+MS G + D+L G + +LP L+
Sbjct: 60 -FLQEAQVMKKLRHEKLVQLYAVVSEEP-IYIVTEYMSKGCLLDFLKGEMGKYLRLPQLV 117
Query: 394 KVAIDVSKGMNYLHQNNIIHRDLKAANLLMDENEVS 429
+A ++ GM Y+ + N +HRDL+AAN+L+ EN V
Sbjct: 118 DMAAQIASGMAYVERMNYVHRDLRAANILVGENLVC 153
>pdb|3V5J|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 090
pdb|3V5J|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 090
pdb|3V5L|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|C Chain C, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|D Chain D, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V8T|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 477
pdb|3V8T|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 477
pdb|3V8W|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 469
pdb|3V8W|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 469
Length = 266
Score = 108 bits (269), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 53/141 (37%), Positives = 86/141 (60%), Gaps = 4/141 (2%)
Query: 289 IDPKHLKFGSKVASGSYGDLYRGTYCSQD-VAIKVLKPERINSDMQKEFAQEVFIMRKVR 347
IDP L F ++ SG +G ++ G + ++D VAIK ++ ++ +++F +E +M K+
Sbjct: 4 IDPSELTFVQEIGSGQFGLVHLGYWLNKDKVAIKTIREGAMS---EEDFIEEAEVMMKLS 60
Query: 348 HKNVVQFIGACTKPPSLCIVTEFMSGGSVYDYLHKLKGVFKLPSLLKVAIDVSKGMNYLH 407
H +VQ G C + +C+V EFM G + DYL +G+F +LL + +DV +GM YL
Sbjct: 61 HPKLVQLYGVCLEQAPICLVFEFMEHGCLSDYLRTQRGLFAAETLLGMCLDVCEGMAYLE 120
Query: 408 QNNIIHRDLKAANLLMDENEV 428
+ +IHRDL A N L+ EN+V
Sbjct: 121 EACVIHRDLAARNCLVGENQV 141
>pdb|1SM2|A Chain A, Crystal Structure Of The Phosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SM2|B Chain B, Crystal Structure Of The Phosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNU|A Chain A, Crystal Structure Of The Unphosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNU|B Chain B, Crystal Structure Of The Unphosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNX|A Chain A, Crystal Structure Of Apo Interleukin-2 Tyrosine Kinase
Catalytic Domain
pdb|1SNX|B Chain B, Crystal Structure Of Apo Interleukin-2 Tyrosine Kinase
Catalytic Domain
Length = 264
Score = 108 bits (269), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 53/141 (37%), Positives = 86/141 (60%), Gaps = 4/141 (2%)
Query: 289 IDPKHLKFGSKVASGSYGDLYRGTYCSQD-VAIKVLKPERINSDMQKEFAQEVFIMRKVR 347
IDP L F ++ SG +G ++ G + ++D VAIK ++ ++ +++F +E +M K+
Sbjct: 2 IDPSELTFVQEIGSGQFGLVHLGYWLNKDKVAIKTIREGAMS---EEDFIEEAEVMMKLS 58
Query: 348 HKNVVQFIGACTKPPSLCIVTEFMSGGSVYDYLHKLKGVFKLPSLLKVAIDVSKGMNYLH 407
H +VQ G C + +C+V EFM G + DYL +G+F +LL + +DV +GM YL
Sbjct: 59 HPKLVQLYGVCLEQAPICLVFEFMEHGCLSDYLRTQRGLFAAETLLGMCLDVCEGMAYLE 118
Query: 408 QNNIIHRDLKAANLLMDENEV 428
+ +IHRDL A N L+ EN+V
Sbjct: 119 EACVIHRDLAARNCLVGENQV 139
>pdb|3DQW|A Chain A, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|B Chain B, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|C Chain C, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|D Chain D, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
Length = 286
Score = 108 bits (269), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 57/155 (36%), Positives = 94/155 (60%), Gaps = 6/155 (3%)
Query: 276 HLKIPNDGTDVWEIDPKHLKFGSKVASGSYGDLYRGTY-CSQDVAIKVLKPERINSDMQK 334
H++ D WEI + L+ K+ G +G+++ GT+ + VAIK LKP ++ +
Sbjct: 2 HMQTQGLAKDAWEIPRESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEA-- 59
Query: 335 EFAQEVFIMRKVRHKNVVQFIGACTKPPSLCIVTEFMSGGSVYDYLHKLKGVF-KLPSLL 393
F QE +M+K+RH+ +VQ ++ P + IV E+MS GS+ D+L G + +LP L+
Sbjct: 60 -FLQEAQVMKKLRHEKLVQLYAVVSEEP-IYIVIEYMSKGSLLDFLKGEMGKYLRLPQLV 117
Query: 394 KVAIDVSKGMNYLHQNNIIHRDLKAANLLMDENEV 428
+A ++ GM Y+ + N +HRDL+AAN+L+ EN V
Sbjct: 118 DMAAQIASGMAYVERMNYVHRDLRAANILVGENLV 152
>pdb|3SVV|A Chain A, Crystal Structure Of T338c C-Src Covalently Bound To
Vinylsulfonamide- Pyrazolopyrimidine 9
pdb|3SVV|B Chain B, Crystal Structure Of T338c C-Src Covalently Bound To
Vinylsulfonamide- Pyrazolopyrimidine 9
Length = 286
Score = 108 bits (269), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 57/156 (36%), Positives = 94/156 (60%), Gaps = 6/156 (3%)
Query: 276 HLKIPNDGTDVWEIDPKHLKFGSKVASGSYGDLYRGTY-CSQDVAIKVLKPERINSDMQK 334
H++ D WEI + L+ K+ G +G+++ GT+ + VAIK LKP ++ +
Sbjct: 2 HMQTQGLAKDAWEIPRESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEA-- 59
Query: 335 EFAQEVFIMRKVRHKNVVQFIGACTKPPSLCIVTEFMSGGSVYDYLHKLKGVF-KLPSLL 393
F QE +M+K+RH+ +VQ ++ P + IV E+MS GS+ D+L G + +LP L+
Sbjct: 60 -FLQEAQVMKKLRHEKLVQLYAVVSEEP-IYIVCEYMSKGSLLDFLKGEMGKYLRLPQLV 117
Query: 394 KVAIDVSKGMNYLHQNNIIHRDLKAANLLMDENEVS 429
+A ++ GM Y+ + N +HRDL+AAN+L+ EN V
Sbjct: 118 DMAAQIASGMAYVERMNYVHRDLRAANILVGENLVC 153
>pdb|3G6H|A Chain A, Src Thr338ile Inhibited In The Dfg-Asp-Out Conformation
pdb|3G6H|B Chain B, Src Thr338ile Inhibited In The Dfg-Asp-Out Conformation
Length = 286
Score = 108 bits (269), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 57/155 (36%), Positives = 94/155 (60%), Gaps = 6/155 (3%)
Query: 276 HLKIPNDGTDVWEIDPKHLKFGSKVASGSYGDLYRGTY-CSQDVAIKVLKPERINSDMQK 334
H++ D WEI + L+ K+ G +G+++ GT+ + VAIK LKP ++ +
Sbjct: 2 HMQTQGLAKDAWEIPRESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEA-- 59
Query: 335 EFAQEVFIMRKVRHKNVVQFIGACTKPPSLCIVTEFMSGGSVYDYLHKLKGVF-KLPSLL 393
F QE +M+K+RH+ +VQ ++ P + IV E+MS GS+ D+L G + +LP L+
Sbjct: 60 -FLQEAQVMKKLRHEKLVQLYAVVSEEP-IYIVIEYMSKGSLLDFLKGEMGKYLRLPQLV 117
Query: 394 KVAIDVSKGMNYLHQNNIIHRDLKAANLLMDENEV 428
+A ++ GM Y+ + N +HRDL+AAN+L+ EN V
Sbjct: 118 DMAAQIASGMAYVERMNYVHRDLRAANILVGENLV 152
>pdb|3D7U|B Chain B, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3D7U|D Chain D, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 277
Score = 108 bits (269), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 57/146 (39%), Positives = 92/146 (63%), Gaps = 6/146 (4%)
Query: 285 DVWEIDPKHLKFGSKVASGSYGDLYRGTY-CSQDVAIKVLKPERINSDMQKEFAQEVFIM 343
D WEI + L+ K+ G +G+++ GT+ + VAIK LKP ++ + F QE +M
Sbjct: 2 DAWEIPRESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEA---FLQEAQVM 58
Query: 344 RKVRHKNVVQFIGACTKPPSLCIVTEFMSGGSVYDYLHKLKGVF-KLPSLLKVAIDVSKG 402
+K+RH+ +VQ ++ P + IVTE+MS GS+ D+L G + +LP L+ +A ++ G
Sbjct: 59 KKLRHEKLVQLYAVVSEEP-IYIVTEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASG 117
Query: 403 MNYLHQNNIIHRDLKAANLLMDENEV 428
M Y+ + N +HRDL+AAN+L+ EN V
Sbjct: 118 MAYVERMNYVHRDLRAANILVGENLV 143
>pdb|3DK3|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK3|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 293
Score = 107 bits (267), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 59/164 (35%), Positives = 92/164 (56%), Gaps = 9/164 (5%)
Query: 285 DVWEIDPKHLKFGSKVASGSYGDLYRGTY--CSQDVAIKVLKPERINSDMQKEFAQEVFI 342
D WE++ + K+ G YG++Y G + S VA+K LK + + + EF +E +
Sbjct: 4 DKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVE---EFLKEAAV 60
Query: 343 MRKVRHKNVVQFIGACTKPPSLCIVTEFMSGGSVYDYLHKL-KGVFKLPSLLKVAIDVSK 401
M++++H N+VQ +G CT+ P I+TEFM+ G++ DYL + + LL +A +S
Sbjct: 61 MKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISS 120
Query: 402 GMNYLHQNNIIHRDLKAANLLMDENEVSLLLSLCLFTVSILFCG 445
M YL + N IHRDL A N L+ EN L+ + F +S L G
Sbjct: 121 AMEYLEKKNFIHRDLAARNCLVGENH---LVKVADFGLSRLMTG 161
>pdb|2HIW|A Chain A, Crystal Structure Of Inactive Conformation Abl Kinase
Catalytic Domain Complexed With Type Ii Inhibitor
pdb|2HIW|B Chain B, Crystal Structure Of Inactive Conformation Abl Kinase
Catalytic Domain Complexed With Type Ii Inhibitor
Length = 287
Score = 107 bits (267), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 59/164 (35%), Positives = 92/164 (56%), Gaps = 9/164 (5%)
Query: 285 DVWEIDPKHLKFGSKVASGSYGDLYRGTY--CSQDVAIKVLKPERINSDMQKEFAQEVFI 342
D WE++ + K+ G YG++Y G + S VA+K LK + + + EF +E +
Sbjct: 8 DKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVE---EFLKEAAV 64
Query: 343 MRKVRHKNVVQFIGACTKPPSLCIVTEFMSGGSVYDYLHKL-KGVFKLPSLLKVAIDVSK 401
M++++H N+VQ +G CT+ P I+TEFM+ G++ DYL + + LL +A +S
Sbjct: 65 MKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISS 124
Query: 402 GMNYLHQNNIIHRDLKAANLLMDENEVSLLLSLCLFTVSILFCG 445
M YL + N IHRDL A N L+ EN L+ + F +S L G
Sbjct: 125 AMEYLEKKNFIHRDLAARNCLVGENH---LVKVADFGLSRLMTG 165
>pdb|1FPU|A Chain A, Crystal Structure Of Abl Kinase Domain In Complex With A
Small Molecule Inhibitor
pdb|1FPU|B Chain B, Crystal Structure Of Abl Kinase Domain In Complex With A
Small Molecule Inhibitor
pdb|1IEP|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Sti-571.
pdb|1IEP|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Sti-571.
pdb|1M52|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Pd173955
pdb|1M52|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Pd173955
pdb|1OPJ|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|1OPJ|B Chain B, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|2HZN|A Chain A, Abl Kinase Domain In Complex With Nvp-Afg210
pdb|3K5V|A Chain A, Structure Of Abl Kinase In Complex With Imatinib And Gnf-2
pdb|3K5V|B Chain B, Structure Of Abl Kinase In Complex With Imatinib And Gnf-2
pdb|3MS9|A Chain A, Abl Kinase In Complex With Imatinib And A Fragment (Frag1)
I Myristate Pocket
pdb|3MS9|B Chain B, Abl Kinase In Complex With Imatinib And A Fragment (Frag1)
I Myristate Pocket
pdb|3MSS|A Chain A, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|B Chain B, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|C Chain C, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|D Chain D, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
Length = 293
Score = 107 bits (267), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 59/164 (35%), Positives = 92/164 (56%), Gaps = 9/164 (5%)
Query: 285 DVWEIDPKHLKFGSKVASGSYGDLYRGTY--CSQDVAIKVLKPERINSDMQKEFAQEVFI 342
D WE++ + K+ G YG++Y G + S VA+K LK + + + EF +E +
Sbjct: 11 DKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVE---EFLKEAAV 67
Query: 343 MRKVRHKNVVQFIGACTKPPSLCIVTEFMSGGSVYDYLHKL-KGVFKLPSLLKVAIDVSK 401
M++++H N+VQ +G CT+ P I+TEFM+ G++ DYL + + LL +A +S
Sbjct: 68 MKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISS 127
Query: 402 GMNYLHQNNIIHRDLKAANLLMDENEVSLLLSLCLFTVSILFCG 445
M YL + N IHRDL A N L+ EN L+ + F +S L G
Sbjct: 128 AMEYLEKKNFIHRDLAARNCLVGENH---LVKVADFGLSRLMTG 168
>pdb|2F4J|A Chain A, Structure Of The Kinase Domain Of An Imatinib-Resistant
Abl Mutant In Complex With The Aurora Kinase Inhibitor
Vx-680
Length = 287
Score = 107 bits (267), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 59/164 (35%), Positives = 92/164 (56%), Gaps = 9/164 (5%)
Query: 285 DVWEIDPKHLKFGSKVASGSYGDLYRGTY--CSQDVAIKVLKPERINSDMQKEFAQEVFI 342
D WE++ + K+ G YG++Y G + S VA+K LK + + + EF +E +
Sbjct: 7 DKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVE---EFLKEAAV 63
Query: 343 MRKVRHKNVVQFIGACTKPPSLCIVTEFMSGGSVYDYLHKL-KGVFKLPSLLKVAIDVSK 401
M++++H N+VQ +G CT+ P I+TEFM+ G++ DYL + + LL +A +S
Sbjct: 64 MKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISS 123
Query: 402 GMNYLHQNNIIHRDLKAANLLMDENEVSLLLSLCLFTVSILFCG 445
M YL + N IHRDL A N L+ EN L+ + F +S L G
Sbjct: 124 AMEYLEKKNFIHRDLAARNCLVGENH---LVKVADFGLSRLMTG 164
>pdb|2QOH|A Chain A, Crystal Structure Of Abl Kinase Bound With Ppy-a
pdb|2QOH|B Chain B, Crystal Structure Of Abl Kinase Bound With Ppy-a
pdb|3KF4|A Chain A, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KF4|B Chain B, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KFA|A Chain A, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KFA|B Chain B, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
Length = 288
Score = 107 bits (267), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 59/164 (35%), Positives = 92/164 (56%), Gaps = 9/164 (5%)
Query: 285 DVWEIDPKHLKFGSKVASGSYGDLYRGTY--CSQDVAIKVLKPERINSDMQKEFAQEVFI 342
D WE++ + K+ G YG++Y G + S VA+K LK + + + EF +E +
Sbjct: 6 DKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVE---EFLKEAAV 62
Query: 343 MRKVRHKNVVQFIGACTKPPSLCIVTEFMSGGSVYDYLHKL-KGVFKLPSLLKVAIDVSK 401
M++++H N+VQ +G CT+ P I+TEFM+ G++ DYL + + LL +A +S
Sbjct: 63 MKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISS 122
Query: 402 GMNYLHQNNIIHRDLKAANLLMDENEVSLLLSLCLFTVSILFCG 445
M YL + N IHRDL A N L+ EN L+ + F +S L G
Sbjct: 123 AMEYLEKKNFIHRDLAARNCLVGENH---LVKVADFGLSRLMTG 163
>pdb|2G1T|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|C Chain C, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|D Chain D, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|3UE4|A Chain A, Structural And Spectroscopic Analysis Of The Kinase
Inhibitor Bosutinib Binding To The Abl Tyrosine Kinase
Domain
pdb|3UE4|B Chain B, Structural And Spectroscopic Analysis Of The Kinase
Inhibitor Bosutinib Binding To The Abl Tyrosine Kinase
Domain
Length = 287
Score = 107 bits (267), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 59/164 (35%), Positives = 92/164 (56%), Gaps = 9/164 (5%)
Query: 285 DVWEIDPKHLKFGSKVASGSYGDLYRGTY--CSQDVAIKVLKPERINSDMQKEFAQEVFI 342
D WE++ + K+ G YG++Y G + S VA+K LK + + + EF +E +
Sbjct: 8 DKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVE---EFLKEAAV 64
Query: 343 MRKVRHKNVVQFIGACTKPPSLCIVTEFMSGGSVYDYLHKL-KGVFKLPSLLKVAIDVSK 401
M++++H N+VQ +G CT+ P I+TEFM+ G++ DYL + + LL +A +S
Sbjct: 65 MKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISS 124
Query: 402 GMNYLHQNNIIHRDLKAANLLMDENEVSLLLSLCLFTVSILFCG 445
M YL + N IHRDL A N L+ EN L+ + F +S L G
Sbjct: 125 AMEYLEKKNFIHRDLAARNCLVGENH---LVKVADFGLSRLMTG 165
>pdb|2G2F|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2F|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2H|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2H|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2I|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2I|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
Length = 287
Score = 107 bits (267), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 59/164 (35%), Positives = 92/164 (56%), Gaps = 9/164 (5%)
Query: 285 DVWEIDPKHLKFGSKVASGSYGDLYRGTY--CSQDVAIKVLKPERINSDMQKEFAQEVFI 342
D WE++ + K+ G YG++Y G + S VA+K LK + + + EF +E +
Sbjct: 8 DKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVE---EFLKEAAV 64
Query: 343 MRKVRHKNVVQFIGACTKPPSLCIVTEFMSGGSVYDYLHKL-KGVFKLPSLLKVAIDVSK 401
M++++H N+VQ +G CT+ P I+TEFM+ G++ DYL + + LL +A +S
Sbjct: 65 MKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISS 124
Query: 402 GMNYLHQNNIIHRDLKAANLLMDENEVSLLLSLCLFTVSILFCG 445
M YL + N IHRDL A N L+ EN L+ + F +S L G
Sbjct: 125 AMEYLEKKNFIHRDLAARNCLVGENH---LVKVADFGLSRLMTG 165
>pdb|3OXZ|A Chain A, Crystal Structure Of Abl Kinase Domain Bound With A
Dfg-Out Inhibitor Ap24534
Length = 284
Score = 107 bits (267), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 59/164 (35%), Positives = 92/164 (56%), Gaps = 9/164 (5%)
Query: 285 DVWEIDPKHLKFGSKVASGSYGDLYRGTY--CSQDVAIKVLKPERINSDMQKEFAQEVFI 342
D WE++ + K+ G YG++Y G + S VA+K LK + + + EF +E +
Sbjct: 6 DKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVE---EFLKEAAV 62
Query: 343 MRKVRHKNVVQFIGACTKPPSLCIVTEFMSGGSVYDYLHKL-KGVFKLPSLLKVAIDVSK 401
M++++H N+VQ +G CT+ P I+TEFM+ G++ DYL + + LL +A +S
Sbjct: 63 MKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISS 122
Query: 402 GMNYLHQNNIIHRDLKAANLLMDENEVSLLLSLCLFTVSILFCG 445
M YL + N IHRDL A N L+ EN L+ + F +S L G
Sbjct: 123 AMEYLEKKNFIHRDLAARNCLVGENH---LVKVADFGLSRLMTG 163
>pdb|2GQG|A Chain A, X-Ray Crystal Structure Of Dasatinib (Bms-354825) Bound To
Activated Abl Kinase Domain
pdb|2GQG|B Chain B, X-Ray Crystal Structure Of Dasatinib (Bms-354825) Bound To
Activated Abl Kinase Domain
Length = 278
Score = 107 bits (267), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 59/164 (35%), Positives = 92/164 (56%), Gaps = 9/164 (5%)
Query: 285 DVWEIDPKHLKFGSKVASGSYGDLYRGTY--CSQDVAIKVLKPERINSDMQKEFAQEVFI 342
D WE++ + K+ G YG++Y G + S VA+K LK + + + EF +E +
Sbjct: 11 DKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVE---EFLKEAAV 67
Query: 343 MRKVRHKNVVQFIGACTKPPSLCIVTEFMSGGSVYDYLHKL-KGVFKLPSLLKVAIDVSK 401
M++++H N+VQ +G CT+ P I+TEFM+ G++ DYL + + LL +A +S
Sbjct: 68 MKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISS 127
Query: 402 GMNYLHQNNIIHRDLKAANLLMDENEVSLLLSLCLFTVSILFCG 445
M YL + N IHRDL A N L+ EN L+ + F +S L G
Sbjct: 128 AMEYLEKKNFIHRDLAARNCLVGENH---LVKVADFGLSRLMTG 168
>pdb|3PYY|A Chain A, Discovery And Characterization Of A Cell-Permeable,
Small-Molecule C- Abl Kinase Activator That Binds To The
Myristoyl Binding Site
pdb|3PYY|B Chain B, Discovery And Characterization Of A Cell-Permeable,
Small-Molecule C- Abl Kinase Activator That Binds To The
Myristoyl Binding Site
Length = 298
Score = 107 bits (267), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 59/164 (35%), Positives = 92/164 (56%), Gaps = 9/164 (5%)
Query: 285 DVWEIDPKHLKFGSKVASGSYGDLYRGTY--CSQDVAIKVLKPERINSDMQKEFAQEVFI 342
D WE++ + K+ G YG++Y G + S VA+K LK + + + EF +E +
Sbjct: 19 DKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVE---EFLKEAAV 75
Query: 343 MRKVRHKNVVQFIGACTKPPSLCIVTEFMSGGSVYDYLHKL-KGVFKLPSLLKVAIDVSK 401
M++++H N+VQ +G CT+ P I+TEFM+ G++ DYL + + LL +A +S
Sbjct: 76 MKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISS 135
Query: 402 GMNYLHQNNIIHRDLKAANLLMDENEVSLLLSLCLFTVSILFCG 445
M YL + N IHRDL A N L+ EN L+ + F +S L G
Sbjct: 136 AMEYLEKKNFIHRDLAARNCLVGENH---LVKVADFGLSRLMTG 176
>pdb|3QRI|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dcc- 2036
pdb|3QRI|B Chain B, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dcc- 2036
pdb|3QRK|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dp- 987
Length = 277
Score = 107 bits (267), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 59/164 (35%), Positives = 92/164 (56%), Gaps = 9/164 (5%)
Query: 285 DVWEIDPKHLKFGSKVASGSYGDLYRGTY--CSQDVAIKVLKPERINSDMQKEFAQEVFI 342
D WE++ + K+ G YG++Y G + S VA+K LK + + + EF +E +
Sbjct: 11 DKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVE---EFLKEAAV 67
Query: 343 MRKVRHKNVVQFIGACTKPPSLCIVTEFMSGGSVYDYLHKL-KGVFKLPSLLKVAIDVSK 401
M++++H N+VQ +G CT+ P I+TEFM+ G++ DYL + + LL +A +S
Sbjct: 68 MKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISS 127
Query: 402 GMNYLHQNNIIHRDLKAANLLMDENEVSLLLSLCLFTVSILFCG 445
M YL + N IHRDL A N L+ EN L+ + F +S L G
Sbjct: 128 AMEYLEKKNFIHRDLAARNCLVGENH---LVKVADFGLSRLMTG 168
>pdb|2E2B|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Inno-406
pdb|2E2B|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Inno-406
Length = 293
Score = 107 bits (267), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 59/164 (35%), Positives = 92/164 (56%), Gaps = 9/164 (5%)
Query: 285 DVWEIDPKHLKFGSKVASGSYGDLYRGTY--CSQDVAIKVLKPERINSDMQKEFAQEVFI 342
D WE++ + K+ G YG++Y G + S VA+K LK + + + EF +E +
Sbjct: 11 DKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVE---EFLKEAAV 67
Query: 343 MRKVRHKNVVQFIGACTKPPSLCIVTEFMSGGSVYDYLHKL-KGVFKLPSLLKVAIDVSK 401
M++++H N+VQ +G CT+ P I+TEFM+ G++ DYL + + LL +A +S
Sbjct: 68 MKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISS 127
Query: 402 GMNYLHQNNIIHRDLKAANLLMDENEVSLLLSLCLFTVSILFCG 445
M YL + N IHRDL A N L+ EN L+ + F +S L G
Sbjct: 128 AMEYLEKKNFIHRDLAARNCLVGENH---LVKVADFGLSRLMTG 168
>pdb|2HYY|A Chain A, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|B Chain B, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|C Chain C, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|D Chain D, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HZ4|A Chain A, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
pdb|2HZ4|B Chain B, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
pdb|2HZ4|C Chain C, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
Length = 273
Score = 107 bits (266), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 59/164 (35%), Positives = 92/164 (56%), Gaps = 9/164 (5%)
Query: 285 DVWEIDPKHLKFGSKVASGSYGDLYRGTY--CSQDVAIKVLKPERINSDMQKEFAQEVFI 342
D WE++ + K+ G YG++Y G + S VA+K LK + + + EF +E +
Sbjct: 6 DKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVE---EFLKEAAV 62
Query: 343 MRKVRHKNVVQFIGACTKPPSLCIVTEFMSGGSVYDYLHKL-KGVFKLPSLLKVAIDVSK 401
M++++H N+VQ +G CT+ P I+TEFM+ G++ DYL + + LL +A +S
Sbjct: 63 MKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISS 122
Query: 402 GMNYLHQNNIIHRDLKAANLLMDENEVSLLLSLCLFTVSILFCG 445
M YL + N IHRDL A N L+ EN L+ + F +S L G
Sbjct: 123 AMEYLEKKNFIHRDLAARNCLVGENH---LVKVADFGLSRLMTG 163
>pdb|2HZ0|A Chain A, Abl Kinase Domain In Complex With Nvp-Aeg082
pdb|2HZ0|B Chain B, Abl Kinase Domain In Complex With Nvp-Aeg082
Length = 270
Score = 107 bits (266), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 59/164 (35%), Positives = 92/164 (56%), Gaps = 9/164 (5%)
Query: 285 DVWEIDPKHLKFGSKVASGSYGDLYRGTY--CSQDVAIKVLKPERINSDMQKEFAQEVFI 342
D WE++ + K+ G YG++Y G + S VA+K LK + + + EF +E +
Sbjct: 6 DKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVE---EFLKEAAV 62
Query: 343 MRKVRHKNVVQFIGACTKPPSLCIVTEFMSGGSVYDYLHKL-KGVFKLPSLLKVAIDVSK 401
M++++H N+VQ +G CT+ P I+TEFM+ G++ DYL + + LL +A +S
Sbjct: 63 MKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISS 122
Query: 402 GMNYLHQNNIIHRDLKAANLLMDENEVSLLLSLCLFTVSILFCG 445
M YL + N IHRDL A N L+ EN L+ + F +S L G
Sbjct: 123 AMEYLEKKNFIHRDLAARNCLVGENH---LVKVADFGLSRLMTG 163
>pdb|2V7A|A Chain A, Crystal Structure Of The T315i Abl Mutant In Complex With
The Inhibitor Pha-739358
pdb|2V7A|B Chain B, Crystal Structure Of The T315i Abl Mutant In Complex With
The Inhibitor Pha-739358
Length = 286
Score = 106 bits (265), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 59/169 (34%), Positives = 93/169 (55%), Gaps = 9/169 (5%)
Query: 280 PNDGTDVWEIDPKHLKFGSKVASGSYGDLYRGTY--CSQDVAIKVLKPERINSDMQKEFA 337
P+ D WE++ + K+ G YG++Y G + S VA+K LK + + + EF
Sbjct: 2 PSPNYDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVE---EFL 58
Query: 338 QEVFIMRKVRHKNVVQFIGACTKPPSLCIVTEFMSGGSVYDYLHKL-KGVFKLPSLLKVA 396
+E +M++++H N+VQ +G CT+ P I+ EFM+ G++ DYL + + LL +A
Sbjct: 59 KEAAVMKEIKHPNLVQLLGVCTREPPFYIIIEFMTYGNLLDYLRECNRQEVNAVVLLYMA 118
Query: 397 IDVSKGMNYLHQNNIIHRDLKAANLLMDENEVSLLLSLCLFTVSILFCG 445
+S M YL + N IHRDL A N L+ EN L+ + F +S L G
Sbjct: 119 TQISSAMEYLEKKNFIHRDLAARNCLVGENH---LVKVADFGLSRLMTG 164
>pdb|1OPK|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
Length = 495
Score = 106 bits (265), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 58/164 (35%), Positives = 92/164 (56%), Gaps = 9/164 (5%)
Query: 285 DVWEIDPKHLKFGSKVASGSYGDLYRGTY--CSQDVAIKVLKPERINSDMQKEFAQEVFI 342
D WE++ + K+ G YG++Y G + S VA+K LK + + + EF +E +
Sbjct: 213 DKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVE---EFLKEAAV 269
Query: 343 MRKVRHKNVVQFIGACTKPPSLCIVTEFMSGGSVYDYLHKL-KGVFKLPSLLKVAIDVSK 401
M++++H N+VQ +G CT+ P I+TEFM+ G++ DYL + + LL +A +S
Sbjct: 270 MKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISS 329
Query: 402 GMNYLHQNNIIHRDLKAANLLMDENEVSLLLSLCLFTVSILFCG 445
M YL + N IHR+L A N L+ EN L+ + F +S L G
Sbjct: 330 AMEYLEKKNFIHRNLAARNCLVGENH---LVKVADFGLSRLMTG 370
>pdb|2QQ7|A Chain A, Crystal Structure Of Drug Resistant Src Kinase Domain With
Irreversible Inhibitor
pdb|2QQ7|B Chain B, Crystal Structure Of Drug Resistant Src Kinase Domain With
Irreversible Inhibitor
pdb|2QI8|A Chain A, Crystal Structure Of Drug Resistant Src Kinase Domain
pdb|2QI8|B Chain B, Crystal Structure Of Drug Resistant Src Kinase Domain
pdb|3F3W|A Chain A, Drug Resistant Csrc Kinase Domain In Complex With
Inhibitor Rl45 (Type Ii)
pdb|3F3W|B Chain B, Drug Resistant Csrc Kinase Domain In Complex With
Inhibitor Rl45 (Type Ii)
pdb|3LOK|A Chain A, Drug Resistant Csrc Kinase Domain In Complex With Covalent
Inhibitor Pd168393
pdb|3LOK|B Chain B, Drug Resistant Csrc Kinase Domain In Complex With Covalent
Inhibitor Pd168393
Length = 286
Score = 106 bits (265), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 56/156 (35%), Positives = 93/156 (59%), Gaps = 6/156 (3%)
Query: 276 HLKIPNDGTDVWEIDPKHLKFGSKVASGSYGDLYRGTY-CSQDVAIKVLKPERINSDMQK 334
H++ D WEI + L+ K+ G +G+++ GT+ + VAIK LKP ++ +
Sbjct: 2 HMQTQGLAKDAWEIPRESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEA-- 59
Query: 335 EFAQEVFIMRKVRHKNVVQFIGACTKPPSLCIVTEFMSGGSVYDYLHKLKGVF-KLPSLL 393
F QE +M+K+RH+ +VQ ++ P + IV E+MS G + D+L G + +LP L+
Sbjct: 60 -FLQEAQVMKKLRHEKLVQLYAVVSEEP-IYIVMEYMSKGCLLDFLKGEMGKYLRLPQLV 117
Query: 394 KVAIDVSKGMNYLHQNNIIHRDLKAANLLMDENEVS 429
+A ++ GM Y+ + N +HRDL+AAN+L+ EN V
Sbjct: 118 DMAAQIASGMAYVERMNYVHRDLRAANILVGENLVC 153
>pdb|2FO0|A Chain A, Organization Of The Sh3-Sh2 Unit In Active And Inactive
Forms Of The C-Abl Tyrosine Kinase
Length = 495
Score = 106 bits (264), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 58/164 (35%), Positives = 92/164 (56%), Gaps = 9/164 (5%)
Query: 285 DVWEIDPKHLKFGSKVASGSYGDLYRGTY--CSQDVAIKVLKPERINSDMQKEFAQEVFI 342
D WE++ + K+ G YG++Y G + S VA+K LK + + + EF +E +
Sbjct: 210 DKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVE---EFLKEAAV 266
Query: 343 MRKVRHKNVVQFIGACTKPPSLCIVTEFMSGGSVYDYLHKL-KGVFKLPSLLKVAIDVSK 401
M++++H N+VQ +G CT+ P I+TEFM+ G++ DYL + + LL +A +S
Sbjct: 267 MKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISS 326
Query: 402 GMNYLHQNNIIHRDLKAANLLMDENEVSLLLSLCLFTVSILFCG 445
M YL + N IHR+L A N L+ EN L+ + F +S L G
Sbjct: 327 AMEYLEKKNFIHRNLAARNCLVGENH---LVKVADFGLSRLMTG 367
>pdb|3K54|A Chain A, Structures Of Human Bruton's Tyrosine Kinase In Active And
Inactive Conformations Suggests A Mechanism Of
Activation For Tec Family Kinases
Length = 283
Score = 106 bits (264), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 54/147 (36%), Positives = 86/147 (58%), Gaps = 4/147 (2%)
Query: 283 GTDVWEIDPKHLKFGSKVASGSYGDLYRGTYCSQ-DVAIKVLKPERINSDMQKEFAQEVF 341
G WEIDPK L F ++ +G +G + G + Q DVAIK++K ++ D EF +E
Sbjct: 15 GYGSWEIDPKDLTFLKELGTGQFGVVKYGKWRGQYDVAIKMIKEGSMSED---EFIEEAK 71
Query: 342 IMRKVRHKNVVQFIGACTKPPSLCIVTEFMSGGSVYDYLHKLKGVFKLPSLLKVAIDVSK 401
+M + H+ +VQ G CTK + I+TE+M+ G + +YL +++ F+ LL++ DV +
Sbjct: 72 VMMNLSHEKLVQLYGVCTKQRPIFIITEYMANGCLLNYLREMRHRFQTQQLLEMCKDVCE 131
Query: 402 GMNYLHQNNIIHRDLKAANLLMDENEV 428
M YL +HRDL A N L+++ V
Sbjct: 132 AMEYLESKQFLHRDLAARNCLVNDQGV 158
>pdb|3GEN|A Chain A, The 1.6 A Crystal Structure Of Human Bruton's Tyrosine
Kinase Bound To A Pyrrolopyrimidine-Containing Compound
Length = 283
Score = 106 bits (264), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 54/147 (36%), Positives = 86/147 (58%), Gaps = 4/147 (2%)
Query: 283 GTDVWEIDPKHLKFGSKVASGSYGDLYRGTYCSQ-DVAIKVLKPERINSDMQKEFAQEVF 341
G WEIDPK L F ++ +G +G + G + Q DVAIK++K ++ D EF +E
Sbjct: 15 GYGSWEIDPKDLTFLKELGTGQFGVVKYGKWRGQYDVAIKMIKEGSMSED---EFIEEAK 71
Query: 342 IMRKVRHKNVVQFIGACTKPPSLCIVTEFMSGGSVYDYLHKLKGVFKLPSLLKVAIDVSK 401
+M + H+ +VQ G CTK + I+TE+M+ G + +YL +++ F+ LL++ DV +
Sbjct: 72 VMMNLSHEKLVQLYGVCTKQRPIFIITEYMANGCLLNYLREMRHRFQTQQLLEMCKDVCE 131
Query: 402 GMNYLHQNNIIHRDLKAANLLMDENEV 428
M YL +HRDL A N L+++ V
Sbjct: 132 AMEYLESKQFLHRDLAARNCLVNDQGV 158
>pdb|3DK6|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK6|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 293
Score = 106 bits (264), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 58/164 (35%), Positives = 92/164 (56%), Gaps = 9/164 (5%)
Query: 285 DVWEIDPKHLKFGSKVASGSYGDLYRGTY--CSQDVAIKVLKPERINSDMQKEFAQEVFI 342
D WE++ + K+ G +G++Y G + S VA+K LK + + + EF +E +
Sbjct: 4 DKWEMERTDITMKHKLGGGQFGEVYEGVWKKYSLTVAVKTLKEDTMEVE---EFLKEAAV 60
Query: 343 MRKVRHKNVVQFIGACTKPPSLCIVTEFMSGGSVYDYLHKL-KGVFKLPSLLKVAIDVSK 401
M++++H N+VQ +G CT+ P I+TEFM+ G++ DYL + + LL +A +S
Sbjct: 61 MKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISS 120
Query: 402 GMNYLHQNNIIHRDLKAANLLMDENEVSLLLSLCLFTVSILFCG 445
M YL + N IHRDL A N L+ EN L+ + F +S L G
Sbjct: 121 AMEYLEKKNFIHRDLAARNCLVGENH---LVKVADFGLSRLMTG 161
>pdb|1YOJ|A Chain A, Crystal Structure Of Src Kinase Domain
pdb|1YOJ|B Chain B, Crystal Structure Of Src Kinase Domain
pdb|1YOM|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Purvalanol A
pdb|1YOM|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Purvalanol A
Length = 283
Score = 106 bits (264), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 55/146 (37%), Positives = 92/146 (63%), Gaps = 6/146 (4%)
Query: 285 DVWEIDPKHLKFGSKVASGSYGDLYRGTY-CSQDVAIKVLKPERINSDMQKEFAQEVFIM 343
D WEI + L+ K+ G +G+++ GT+ + VAIK LKP ++ + F QE +M
Sbjct: 8 DAWEIPRESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEA---FLQEAQVM 64
Query: 344 RKVRHKNVVQFIGACTKPPSLCIVTEFMSGGSVYDYLHKLKGVF-KLPSLLKVAIDVSKG 402
+K+RH+ +VQ ++ P + IVTE+M+ GS+ D+L G + +LP L+ ++ ++ G
Sbjct: 65 KKLRHEKLVQLYAVVSEEP-IYIVTEYMNKGSLLDFLKGETGKYLRLPQLVDMSAQIASG 123
Query: 403 MNYLHQNNIIHRDLKAANLLMDENEV 428
M Y+ + N +HRDL+AAN+L+ EN V
Sbjct: 124 MAYVERMNYVHRDLRAANILVGENLV 149
>pdb|3PIX|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-Isopropyl-7-
(4-Methyl-Piperazin-1-Yl)-4-(5-Methyl-2h-Pyrazol-3-
Ylamino)-2h- Phthalazin-1-One
pdb|3PIY|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With R406
pdb|3PIZ|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
(5-Amino-1-O-
Tolyl-1h-Pyrazol-4-Yl)-[3-(1-Methanesulfonyl-Piperidin-
4-Yl)-Phenyl]- Methanone
pdb|3PJ1|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
3-(2,6-Dichloro-
Phenyl)-7-[4-(2-Diethylamino-Ethoxy)-Phenylamino]-1-
Methyl-3,4- Dihydro-1h-Pyrimido[4,5-D]pyrimidin-2-One
pdb|3PJ2|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-[4-(2-
Diethylamino-Ethoxy)-Phenylamino]-6-(4-Fluoro-Phenoxy)-
8-Methyl-8h- Pyrido[2,3-D]pyrimidin-7-One
pdb|3PJ3|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-Methyl-5-[(E)-
(3-Phenyl-Acryloyl)amino]-N-(2-Phenyl-3h-Imidazo[4,
5-B]pyridin-6-Yl)- Benzamide
Length = 274
Score = 106 bits (264), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 54/147 (36%), Positives = 86/147 (58%), Gaps = 4/147 (2%)
Query: 283 GTDVWEIDPKHLKFGSKVASGSYGDLYRGTYCSQ-DVAIKVLKPERINSDMQKEFAQEVF 341
G WEIDPK L F ++ +G +G + G + Q DVAIK++K ++ D EF +E
Sbjct: 6 GYGSWEIDPKDLTFLKELGTGQFGVVKYGKWRGQYDVAIKMIKEGSMSED---EFIEEAK 62
Query: 342 IMRKVRHKNVVQFIGACTKPPSLCIVTEFMSGGSVYDYLHKLKGVFKLPSLLKVAIDVSK 401
+M + H+ +VQ G CTK + I+TE+M+ G + +YL +++ F+ LL++ DV +
Sbjct: 63 VMMNLSHEKLVQLYGVCTKQRPIFIITEYMANGCLLNYLREMRHRFQTQQLLEMCKDVCE 122
Query: 402 GMNYLHQNNIIHRDLKAANLLMDENEV 428
M YL +HRDL A N L+++ V
Sbjct: 123 AMEYLESKQFLHRDLAARNCLVNDQGV 149
>pdb|1OPL|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|1OPL|B Chain B, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
Length = 537
Score = 106 bits (264), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 58/164 (35%), Positives = 92/164 (56%), Gaps = 9/164 (5%)
Query: 285 DVWEIDPKHLKFGSKVASGSYGDLYRGTY--CSQDVAIKVLKPERINSDMQKEFAQEVFI 342
D WE++ + K+ G YG++Y G + S VA+K LK + + + EF +E +
Sbjct: 252 DKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVE---EFLKEAAV 308
Query: 343 MRKVRHKNVVQFIGACTKPPSLCIVTEFMSGGSVYDYLHKL-KGVFKLPSLLKVAIDVSK 401
M++++H N+VQ +G CT+ P I+TEFM+ G++ DYL + + LL +A +S
Sbjct: 309 MKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISS 368
Query: 402 GMNYLHQNNIIHRDLKAANLLMDENEVSLLLSLCLFTVSILFCG 445
M YL + N IHR+L A N L+ EN L+ + F +S L G
Sbjct: 369 AMEYLEKKNFIHRNLAARNCLVGENH---LVKVADFGLSRLMTG 409
>pdb|1YOL|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Cgp77675
pdb|1YOL|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Cgp77675
Length = 283
Score = 105 bits (263), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 55/146 (37%), Positives = 92/146 (63%), Gaps = 6/146 (4%)
Query: 285 DVWEIDPKHLKFGSKVASGSYGDLYRGTY-CSQDVAIKVLKPERINSDMQKEFAQEVFIM 343
D WEI + L+ K+ G +G+++ GT+ + VAIK LKP ++ + F QE +M
Sbjct: 8 DAWEIPRESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEA---FLQEAQVM 64
Query: 344 RKVRHKNVVQFIGACTKPPSLCIVTEFMSGGSVYDYLHKLKGVF-KLPSLLKVAIDVSKG 402
+K+RH+ +VQ ++ P + IVTE+M+ GS+ D+L G + +LP L+ ++ ++ G
Sbjct: 65 KKLRHEKLVQLYAVVSEEP-IYIVTEYMNKGSLLDFLKGETGKYLRLPQLVDMSAQIASG 123
Query: 403 MNYLHQNNIIHRDLKAANLLMDENEV 428
M Y+ + N +HRDL+AAN+L+ EN V
Sbjct: 124 MAYVERMNYVHRDLRAANILVGENLV 149
>pdb|3U4W|A Chain A, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc4b
pdb|3U51|A Chain A, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc1
pdb|3U51|B Chain B, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc1
Length = 275
Score = 105 bits (263), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 56/144 (38%), Positives = 91/144 (63%), Gaps = 6/144 (4%)
Query: 287 WEIDPKHLKFGSKVASGSYGDLYRGTY-CSQDVAIKVLKPERINSDMQKEFAQEVFIMRK 345
WEI + L+ K+ G +G+++ GT+ + VAIK LKP ++ + F QE +M+K
Sbjct: 2 WEIPRESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEA---FLQEAQVMKK 58
Query: 346 VRHKNVVQFIGACTKPPSLCIVTEFMSGGSVYDYLHKLKGVF-KLPSLLKVAIDVSKGMN 404
+RH+ +VQ ++ P + IVTE+MS GS+ D+L G + +LP L+ +A ++ GM
Sbjct: 59 LRHEKLVQLYAVVSEEP-IYIVTEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMA 117
Query: 405 YLHQNNIIHRDLKAANLLMDENEV 428
Y+ + N +HRDL+AAN+L+ EN V
Sbjct: 118 YVERMNYVHRDLRAANILVGENLV 141
>pdb|3P08|A Chain A, Crystal Structure Of The Human Btk Kinase Domain
pdb|3P08|B Chain B, Crystal Structure Of The Human Btk Kinase Domain
Length = 267
Score = 105 bits (262), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 53/143 (37%), Positives = 85/143 (59%), Gaps = 4/143 (2%)
Query: 287 WEIDPKHLKFGSKVASGSYGDLYRGTYCSQ-DVAIKVLKPERINSDMQKEFAQEVFIMRK 345
WEIDPK L F ++ +G +G + G + Q DVAIK++K ++ D EF +E +M
Sbjct: 3 WEIDPKDLTFLKELGTGQFGVVKYGKWRGQYDVAIKMIKEGSMSED---EFIEEAKVMMN 59
Query: 346 VRHKNVVQFIGACTKPPSLCIVTEFMSGGSVYDYLHKLKGVFKLPSLLKVAIDVSKGMNY 405
+ H+ +VQ G CTK + I+TE+M+ G + +YL +++ F+ LL++ DV + M Y
Sbjct: 60 LSHEKLVQLYGVCTKQRPIFIITEYMANGCLLNYLREMRHRFQTQQLLEMCKDVCEAMEY 119
Query: 406 LHQNNIIHRDLKAANLLMDENEV 428
L +HRDL A N L+++ V
Sbjct: 120 LESKQFLHRDLAARNCLVNDQGV 142
>pdb|3OCS|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase In Complex
With Inhibitor Cgi1746
Length = 271
Score = 105 bits (261), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 53/143 (37%), Positives = 85/143 (59%), Gaps = 4/143 (2%)
Query: 287 WEIDPKHLKFGSKVASGSYGDLYRGTYCSQ-DVAIKVLKPERINSDMQKEFAQEVFIMRK 345
WEIDPK L F ++ +G +G + G + Q DVAIK++K ++ D EF +E +M
Sbjct: 4 WEIDPKDLTFLKELGTGQFGVVKYGKWRGQYDVAIKMIKEGSMSED---EFIEEAKVMMN 60
Query: 346 VRHKNVVQFIGACTKPPSLCIVTEFMSGGSVYDYLHKLKGVFKLPSLLKVAIDVSKGMNY 405
+ H+ +VQ G CTK + I+TE+M+ G + +YL +++ F+ LL++ DV + M Y
Sbjct: 61 LSHEKLVQLYGVCTKQRPIFIITEYMANGCLLNYLREMRHRFQTQQLLEMCKDVCEAMEY 120
Query: 406 LHQNNIIHRDLKAANLLMDENEV 428
L +HRDL A N L+++ V
Sbjct: 121 LESKQFLHRDLAARNCLVNDQGV 143
>pdb|3OCT|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase Mutant V555r
In Complex With Dasatinib
Length = 265
Score = 105 bits (261), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 53/143 (37%), Positives = 85/143 (59%), Gaps = 4/143 (2%)
Query: 287 WEIDPKHLKFGSKVASGSYGDLYRGTYCSQ-DVAIKVLKPERINSDMQKEFAQEVFIMRK 345
WEIDPK L F ++ +G +G + G + Q DVAIK++K ++ D EF +E +M
Sbjct: 4 WEIDPKDLTFLKELGTGQFGVVKYGKWRGQYDVAIKMIKEGSMSED---EFIEEAKVMMN 60
Query: 346 VRHKNVVQFIGACTKPPSLCIVTEFMSGGSVYDYLHKLKGVFKLPSLLKVAIDVSKGMNY 405
+ H+ +VQ G CTK + I+TE+M+ G + +YL +++ F+ LL++ DV + M Y
Sbjct: 61 LSHEKLVQLYGVCTKQRPIFIITEYMANGCLLNYLREMRHRFQTQQLLEMCKDVCEAMEY 120
Query: 406 LHQNNIIHRDLKAANLLMDENEV 428
L +HRDL A N L+++ V
Sbjct: 121 LESKQFLHRDLAARNCLVNDQGV 143
>pdb|2Z60|A Chain A, Crystal Structure Of The T315i Mutant Of Abl Kinase Bound
With Ppy-A
pdb|3IK3|A Chain A, Ap24534, A Pan-Bcr-Abl Inhibitor For Chronic Myeloid
Leukemi Potently Inhibits The T315i Mutant And Overcomes
Mutation-B Resistance
pdb|3IK3|B Chain B, Ap24534, A Pan-Bcr-Abl Inhibitor For Chronic Myeloid
Leukemi Potently Inhibits The T315i Mutant And Overcomes
Mutation-B Resistance
Length = 288
Score = 105 bits (261), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 58/164 (35%), Positives = 91/164 (55%), Gaps = 9/164 (5%)
Query: 285 DVWEIDPKHLKFGSKVASGSYGDLYRGTY--CSQDVAIKVLKPERINSDMQKEFAQEVFI 342
D WE++ + K+ G YG++Y G + S VA+K LK + + + EF +E +
Sbjct: 6 DKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVE---EFLKEAAV 62
Query: 343 MRKVRHKNVVQFIGACTKPPSLCIVTEFMSGGSVYDYLHKL-KGVFKLPSLLKVAIDVSK 401
M++++H N+VQ +G CT+ P I+ EFM+ G++ DYL + + LL +A +S
Sbjct: 63 MKEIKHPNLVQLLGVCTREPPFYIIIEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISS 122
Query: 402 GMNYLHQNNIIHRDLKAANLLMDENEVSLLLSLCLFTVSILFCG 445
M YL + N IHRDL A N L+ EN L+ + F +S L G
Sbjct: 123 AMEYLEKKNFIHRDLAARNCLVGENH---LVKVADFGLSRLMTG 163
>pdb|3DK7|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK7|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 277
Score = 105 bits (261), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 58/164 (35%), Positives = 91/164 (55%), Gaps = 9/164 (5%)
Query: 285 DVWEIDPKHLKFGSKVASGSYGDLYRGTY--CSQDVAIKVLKPERINSDMQKEFAQEVFI 342
D WE++ + K+ G YG++Y G + S VA+K LK + + + EF +E +
Sbjct: 4 DKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVE---EFLKEAAV 60
Query: 343 MRKVRHKNVVQFIGACTKPPSLCIVTEFMSGGSVYDYLHKL-KGVFKLPSLLKVAIDVSK 401
M++++H N+VQ +G CT+ P I+ EFM+ G++ DYL + + LL +A +S
Sbjct: 61 MKEIKHPNLVQLLGVCTREPPFYIIIEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISS 120
Query: 402 GMNYLHQNNIIHRDLKAANLLMDENEVSLLLSLCLFTVSILFCG 445
M YL + N IHRDL A N L+ EN L+ + F +S L G
Sbjct: 121 AMEYLEKKNFIHRDLAARNCLVGENH---LVKVADFGLSRLMTG 161
>pdb|3QRJ|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain T315i
Mutant In Complex With Dcc-2036
pdb|3QRJ|B Chain B, The Crystal Structure Of Human Abl1 Kinase Domain T315i
Mutant In Complex With Dcc-2036
Length = 277
Score = 105 bits (261), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 58/164 (35%), Positives = 91/164 (55%), Gaps = 9/164 (5%)
Query: 285 DVWEIDPKHLKFGSKVASGSYGDLYRGTY--CSQDVAIKVLKPERINSDMQKEFAQEVFI 342
D WE++ + K+ G YG++Y G + S VA+K LK + + + EF +E +
Sbjct: 11 DKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVE---EFLKEAAV 67
Query: 343 MRKVRHKNVVQFIGACTKPPSLCIVTEFMSGGSVYDYLHKL-KGVFKLPSLLKVAIDVSK 401
M++++H N+VQ +G CT+ P I+ EFM+ G++ DYL + + LL +A +S
Sbjct: 68 MKEIKHPNLVQLLGVCTREPPFYIIIEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISS 127
Query: 402 GMNYLHQNNIIHRDLKAANLLMDENEVSLLLSLCLFTVSILFCG 445
M YL + N IHRDL A N L+ EN L+ + F +S L G
Sbjct: 128 AMEYLEKKNFIHRDLAARNCLVGENH---LVKVADFGLSRLMTG 168
>pdb|3OY3|A Chain A, Crystal Structure Of Abl T315i Mutant Kinase Domain Bound
With A Dfg- Out Inhibitor Ap24589
pdb|3OY3|B Chain B, Crystal Structure Of Abl T315i Mutant Kinase Domain Bound
With A Dfg- Out Inhibitor Ap24589
Length = 284
Score = 105 bits (261), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 58/164 (35%), Positives = 91/164 (55%), Gaps = 9/164 (5%)
Query: 285 DVWEIDPKHLKFGSKVASGSYGDLYRGTY--CSQDVAIKVLKPERINSDMQKEFAQEVFI 342
D WE++ + K+ G YG++Y G + S VA+K LK + + + EF +E +
Sbjct: 6 DKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVE---EFLKEAAV 62
Query: 343 MRKVRHKNVVQFIGACTKPPSLCIVTEFMSGGSVYDYLHKL-KGVFKLPSLLKVAIDVSK 401
M++++H N+VQ +G CT+ P I+ EFM+ G++ DYL + + LL +A +S
Sbjct: 63 MKEIKHPNLVQLLGVCTREPPFYIIIEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISS 122
Query: 402 GMNYLHQNNIIHRDLKAANLLMDENEVSLLLSLCLFTVSILFCG 445
M YL + N IHRDL A N L+ EN L+ + F +S L G
Sbjct: 123 AMEYLEKKNFIHRDLAARNCLVGENH---LVKVADFGLSRLMTG 163
>pdb|3GVU|A Chain A, The Crystal Structure Of Human Abl2 In Complex With
Gleevec
pdb|3HMI|A Chain A, The Crystal Structure Of Human Abl2 In Complex With
5-Amino-3-{[4-
(Aminosulfonyl)phenyl]amino}-N-(2,
6-Difluorophenyl)-1h-1,2,4- Triazole-1-Carbothioamide
pdb|2XYN|A Chain A, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
pdb|2XYN|B Chain B, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
pdb|2XYN|C Chain C, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
Length = 292
Score = 102 bits (253), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 59/164 (35%), Positives = 90/164 (54%), Gaps = 9/164 (5%)
Query: 285 DVWEIDPKHLKFGSKVASGSYGDLYRGTY--CSQDVAIKVLKPERINSDMQKEFAQEVFI 342
D WE++ + K+ G YG++Y G + S VA+K LK + + + EF +E +
Sbjct: 25 DKWEMERTDITMKHKLGGGQYGEVYVGVWKKYSLTVAVKTLKEDTMEVE---EFLKEAAV 81
Query: 343 MRKVRHKNVVQFIGACTKPPSLCIVTEFMSGGSVYDYLHKL-KGVFKLPSLLKVAIDVSK 401
M++++H N+VQ +G CT P IVTE+M G++ DYL + + LL +A +S
Sbjct: 82 MKEIKHPNLVQLLGVCTLEPPFYIVTEYMPYGNLLDYLRECNREEVTAVVLLYMATQISS 141
Query: 402 GMNYLHQNNIIHRDLKAANLLMDENEVSLLLSLCLFTVSILFCG 445
M YL + N IHRDL A N L+ EN V + + F +S L G
Sbjct: 142 AMEYLEKKNFIHRDLAARNCLVGENHV---VKVADFGLSRLMTG 182
>pdb|2DQ7|X Chain X, Crystal Structure Of Fyn Kinase Domain Complexed With
Staurosporine
Length = 283
Score = 101 bits (252), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 54/141 (38%), Positives = 91/141 (64%), Gaps = 6/141 (4%)
Query: 285 DVWEIDPKHLKFGSKVASGSYGDLYRGTY-CSQDVAIKVLKPERINSDMQKEFAQEVFIM 343
DVWEI + L+ ++ +G +G+++ GT+ + VAIK LKP ++ + F +E IM
Sbjct: 2 DVWEIPRESLQLIKRLGNGQFGEVWMGTWNGNTKVAIKTLKPGTMSPE---SFLEEAQIM 58
Query: 344 RKVRHKNVVQFIGACTKPPSLCIVTEFMSGGSVYDYLHKLKG-VFKLPSLLKVAIDVSKG 402
+K++H +VQ ++ P + IVTE+M+ GS+ D+L +G KLP+L+ +A V+ G
Sbjct: 59 KKLKHDKLVQLYAVVSEEP-IYIVTEYMNKGSLLDFLKDGEGRALKLPNLVDMAAQVAAG 117
Query: 403 MNYLHQNNIIHRDLKAANLLM 423
M Y+ + N IHRDL++AN+L+
Sbjct: 118 MAYIERMNYIHRDLRSANILV 138
>pdb|1BYG|A Chain A, Kinase Domain Of Human C-Terminal Src Kinase (Csk) In
Complex With Inhibitor Staurosporine
Length = 278
Score = 99.4 bits (246), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 54/145 (37%), Positives = 81/145 (55%), Gaps = 6/145 (4%)
Query: 287 WEIDPKHLKFGSKVASGSYGDLYRGTYCSQDVAIKVLKPERINSDMQKEFAQEVFIMRKV 346
W ++ K LK + G +GD+ G Y VA+K +K N + F E +M ++
Sbjct: 16 WALNMKELKLLQTIGKGEFGDVMLGDYRGNKVAVKCIK----NDATAQAFLAEASVMTQL 71
Query: 347 RHKNVVQFIGACTKPPS-LCIVTEFMSGGSVYDYLH-KLKGVFKLPSLLKVAIDVSKGMN 404
RH N+VQ +G + L IVTE+M+ GS+ DYL + + V LLK ++DV + M
Sbjct: 72 RHSNLVQLLGVIVEEKGGLYIVTEYMAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAME 131
Query: 405 YLHQNNIIHRDLKAANLLMDENEVS 429
YL NN +HRDL A N+L+ E+ V+
Sbjct: 132 YLEGNNFVHRDLAARNVLVSEDNVA 156
>pdb|1K2P|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase Domain
pdb|1K2P|B Chain B, Crystal Structure Of Bruton's Tyrosine Kinase Domain
Length = 263
Score = 99.4 bits (246), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 51/141 (36%), Positives = 83/141 (58%), Gaps = 4/141 (2%)
Query: 289 IDPKHLKFGSKVASGSYGDLYRGTYCSQ-DVAIKVLKPERINSDMQKEFAQEVFIMRKVR 347
IDPK L F ++ +G +G + G + Q DVAIK++K ++ D EF +E +M +
Sbjct: 1 IDPKDLTFLKELGTGQFGVVKYGKWRGQYDVAIKMIKEGSMSED---EFIEEAKVMMNLS 57
Query: 348 HKNVVQFIGACTKPPSLCIVTEFMSGGSVYDYLHKLKGVFKLPSLLKVAIDVSKGMNYLH 407
H+ +VQ G CTK + I+TE+M+ G + +YL +++ F+ LL++ DV + M YL
Sbjct: 58 HEKLVQLYGVCTKQRPIFIITEYMANGCLLNYLREMRHRFQTQQLLEMCKDVCEAMEYLE 117
Query: 408 QNNIIHRDLKAANLLMDENEV 428
+HRDL A N L+++ V
Sbjct: 118 SKQFLHRDLAARNCLVNDQGV 138
>pdb|3D7T|A Chain A, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 269
Score = 99.4 bits (246), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 54/145 (37%), Positives = 81/145 (55%), Gaps = 6/145 (4%)
Query: 287 WEIDPKHLKFGSKVASGSYGDLYRGTYCSQDVAIKVLKPERINSDMQKEFAQEVFIMRKV 346
W ++ K LK + G +GD+ G Y VA+K +K N + F E +M ++
Sbjct: 7 WALNMKELKLLQTIGKGEFGDVMLGDYRGNKVAVKCIK----NDATAQAFLAEASVMTQL 62
Query: 347 RHKNVVQFIGACTKPPS-LCIVTEFMSGGSVYDYLH-KLKGVFKLPSLLKVAIDVSKGMN 404
RH N+VQ +G + L IVTE+M+ GS+ DYL + + V LLK ++DV + M
Sbjct: 63 RHSNLVQLLGVIVEEKGGLYIVTEYMAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAME 122
Query: 405 YLHQNNIIHRDLKAANLLMDENEVS 429
YL NN +HRDL A N+L+ E+ V+
Sbjct: 123 YLEGNNFVHRDLAARNVLVSEDNVA 147
>pdb|3D7U|A Chain A, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3D7U|C Chain C, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 263
Score = 99.0 bits (245), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 54/145 (37%), Positives = 81/145 (55%), Gaps = 6/145 (4%)
Query: 287 WEIDPKHLKFGSKVASGSYGDLYRGTYCSQDVAIKVLKPERINSDMQKEFAQEVFIMRKV 346
W ++ K LK + G +GD+ G Y VA+K +K N + F E +M ++
Sbjct: 1 WALNMKELKLLQTIGKGEFGDVMLGDYRGNKVAVKCIK----NDATAQAFLAEASVMTQL 56
Query: 347 RHKNVVQFIGACTKPPS-LCIVTEFMSGGSVYDYLH-KLKGVFKLPSLLKVAIDVSKGMN 404
RH N+VQ +G + L IVTE+M+ GS+ DYL + + V LLK ++DV + M
Sbjct: 57 RHSNLVQLLGVIVEEKGGLYIVTEYMAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAME 116
Query: 405 YLHQNNIIHRDLKAANLLMDENEVS 429
YL NN +HRDL A N+L+ E+ V+
Sbjct: 117 YLEGNNFVHRDLAARNVLVSEDNVA 141
>pdb|1K9A|A Chain A, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|B Chain B, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|C Chain C, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|D Chain D, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|E Chain E, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|F Chain F, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
Length = 450
Score = 98.6 bits (244), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 54/145 (37%), Positives = 81/145 (55%), Gaps = 6/145 (4%)
Query: 287 WEIDPKHLKFGSKVASGSYGDLYRGTYCSQDVAIKVLKPERINSDMQKEFAQEVFIMRKV 346
W ++ K LK + G +GD+ G Y VA+K +K N + F E +M ++
Sbjct: 188 WALNMKELKLLQTIGKGEFGDVMLGDYRGNKVAVKCIK----NDATAQAFLAEASVMTQL 243
Query: 347 RHKNVVQFIGACTKPPS-LCIVTEFMSGGSVYDYLH-KLKGVFKLPSLLKVAIDVSKGMN 404
RH N+VQ +G + L IVTE+M+ GS+ DYL + + V LLK ++DV + M
Sbjct: 244 RHSNLVQLLGVIVEEKGGLYIVTEYMAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAME 303
Query: 405 YLHQNNIIHRDLKAANLLMDENEVS 429
YL NN +HRDL A N+L+ E+ V+
Sbjct: 304 YLEGNNFVHRDLAARNVLVSEDNVA 328
>pdb|1AD5|A Chain A, Src Family Kinase Hck-Amp-Pnp Complex
pdb|1AD5|B Chain B, Src Family Kinase Hck-Amp-Pnp Complex
pdb|2HCK|A Chain A, Src Family Kinase Hck-Quercetin Complex
pdb|2HCK|B Chain B, Src Family Kinase Hck-Quercetin Complex
Length = 438
Score = 97.1 bits (240), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 54/161 (33%), Positives = 91/161 (56%), Gaps = 6/161 (3%)
Query: 285 DVWEIDPKHLKFGSKVASGSYGDLYRGTYCSQ-DVAIKVLKPERINSDMQKEFAQEVFIM 343
D WEI + LK K+ +G +G+++ TY VA+K +KP ++ + F E +M
Sbjct: 175 DAWEIPRESLKLEKKLGAGQFGEVWMATYNKHTKVAVKTMKPGSMSVEA---FLAEANVM 231
Query: 344 RKVRHKNVVQFIGACTKPPSLCIVTEFMSGGSVYDYLHKLKGVFK-LPSLLKVAIDVSKG 402
+ ++H +V+ TK P + I+TEFM+ GS+ D+L +G + LP L+ + +++G
Sbjct: 232 KTLQHDKLVKLHAVVTKEP-IYIITEFMAKGSLLDFLKSDEGSKQPLPKLIDFSAQIAEG 290
Query: 403 MNYLHQNNIIHRDLKAANLLMDENEVSLLLSLCLFTVSILF 443
M ++ Q N IHRDL+AAN+L+ + V + L V F
Sbjct: 291 MAFIEQRNYIHRDLRAANILVSASLVCKIADFGLARVGAKF 331
>pdb|1QCF|A Chain A, Crystal Structure Of Hck In Complex With A Src Family-
Selective Tyrosine Kinase Inhibitor
pdb|2C0I|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-420983
pdb|2C0I|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-420983
pdb|2C0O|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-770041
pdb|2C0O|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-770041
pdb|2C0T|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-641359
pdb|2C0T|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-641359
Length = 454
Score = 95.9 bits (237), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 53/157 (33%), Positives = 90/157 (57%), Gaps = 6/157 (3%)
Query: 285 DVWEIDPKHLKFGSKVASGSYGDLYRGTYCSQ-DVAIKVLKPERINSDMQKEFAQEVFIM 343
D WEI + LK K+ +G +G+++ TY VA+K +KP ++ + F E +M
Sbjct: 181 DAWEIPRESLKLEKKLGAGQFGEVWMATYNKHTKVAVKTMKPGSMSVEA---FLAEANVM 237
Query: 344 RKVRHKNVVQFIGACTKPPSLCIVTEFMSGGSVYDYLHKLKGVFK-LPSLLKVAIDVSKG 402
+ ++H +V+ TK P + I+TEFM+ GS+ D+L +G + LP L+ + +++G
Sbjct: 238 KTLQHDKLVKLHAVVTKEP-IYIITEFMAKGSLLDFLKSDEGSKQPLPKLIDFSAQIAEG 296
Query: 403 MNYLHQNNIIHRDLKAANLLMDENEVSLLLSLCLFTV 439
M ++ Q N IHRDL+AAN+L+ + V + L V
Sbjct: 297 MAFIEQRNYIHRDLRAANILVSASLVCKIADFGLARV 333
>pdb|2HK5|A Chain A, Hck Kinase In Complex With Lck Targetted Inhibitor Pg-
1009247
Length = 270
Score = 95.9 bits (237), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 53/157 (33%), Positives = 90/157 (57%), Gaps = 6/157 (3%)
Query: 285 DVWEIDPKHLKFGSKVASGSYGDLYRGTYCSQ-DVAIKVLKPERINSDMQKEFAQEVFIM 343
D WEI + LK K+ +G +G+++ TY VA+K +KP ++ + F E +M
Sbjct: 8 DAWEIPRESLKLEKKLGAGQFGEVWMATYNKHTKVAVKTMKPGSMSVEA---FLAEANVM 64
Query: 344 RKVRHKNVVQFIGACTKPPSLCIVTEFMSGGSVYDYLHKLKGVFK-LPSLLKVAIDVSKG 402
+ ++H +V+ TK P + I+TEFM+ GS+ D+L +G + LP L+ + +++G
Sbjct: 65 KTLQHDKLVKLHAVVTKEP-IYIITEFMAKGSLLDFLKSDEGSKQPLPKLIDFSAQIAEG 123
Query: 403 MNYLHQNNIIHRDLKAANLLMDENEVSLLLSLCLFTV 439
M ++ Q N IHRDL+AAN+L+ + V + L V
Sbjct: 124 MAFIEQRNYIHRDLRAANILVSASLVCKIADFGLARV 160
>pdb|2ZV7|A Chain A, Lyn Tyrosine Kinase Domain, Apo Form
pdb|2ZV8|A Chain A, Lyn Tyrosine Kinase Domain-Amp-Pnp Complex
pdb|2ZV9|A Chain A, Lyn Tyrosine Kinase Domain-Pp2 Complex
pdb|2ZVA|A Chain A, Lyn Tyrosine Kinase Domain-dasatinib Complex
Length = 279
Score = 95.5 bits (236), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 53/156 (33%), Positives = 92/156 (58%), Gaps = 8/156 (5%)
Query: 287 WEIDPKHLKFGSKVASGSYGDLYRGTYC-SQDVAIKVLKPERINSDMQKEFAQEVFIMRK 345
WEI + +K K+ +G +G+++ G Y S VA+K LKP ++ + F +E +M+
Sbjct: 7 WEIPRESIKLVKKLGAGQFGEVWMGYYNNSTKVAVKTLKPGTMSV---QAFLEEANLMKT 63
Query: 346 VRHKNVVQFIGACTKPPSLCIVTEFMSGGSVYDYLHKLKG-VFKLPSLLKVAIDVSKGMN 404
++H +V+ TK + I+TEFM+ GS+ D+L +G LP L+ + +++GM
Sbjct: 64 LQHDKLVRLYAVVTKEEPIYIITEFMAKGSLLDFLKSDEGGKVLLPKLIDFSAQIAEGMA 123
Query: 405 YLHQNNIIHRDLKAANLLMDENEVSLLLSLCLFTVS 440
Y+ + N IHRDL+AAN+L+ E SL+ + F ++
Sbjct: 124 YIERKNYIHRDLRAANVLVSE---SLMCKIADFGLA 156
>pdb|3A4O|X Chain X, Lyn Kinase Domain
Length = 286
Score = 94.7 bits (234), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 51/158 (32%), Positives = 93/158 (58%), Gaps = 8/158 (5%)
Query: 285 DVWEIDPKHLKFGSKVASGSYGDLYRGTYC-SQDVAIKVLKPERINSDMQKEFAQEVFIM 343
D WEI + +K ++ +G +G+++ G Y S VA+K LKP ++ + F +E +M
Sbjct: 6 DAWEIPRESIKLVKRLGAGQFGEVWMGYYNNSTKVAVKTLKPGTMSV---QAFLEEANLM 62
Query: 344 RKVRHKNVVQFIGACTKPPSLCIVTEFMSGGSVYDYLHKLKG-VFKLPSLLKVAIDVSKG 402
+ ++H +V+ T+ + I+TE+M+ GS+ D+L +G LP L+ + +++G
Sbjct: 63 KTLQHDKLVRLYAVVTREEPIYIITEYMAKGSLLDFLKSDEGGKVLLPKLIDFSAQIAEG 122
Query: 403 MNYLHQNNIIHRDLKAANLLMDENEVSLLLSLCLFTVS 440
M Y+ + N IHRDL+AAN+L+ E SL+ + F ++
Sbjct: 123 MAYIERKNYIHRDLRAANVLVSE---SLMCKIADFGLA 157
>pdb|3CD3|A Chain A, Crystal Structure Of Phosphorylated Human Feline Sarcoma
Viral Oncogene Homologue (V-Fes) In Complex With
Staurosporine And A Consensus Peptide
Length = 377
Score = 92.4 bits (228), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 56/190 (29%), Positives = 98/190 (51%), Gaps = 15/190 (7%)
Query: 247 KLERQGWPS------HRSSSPTSEPEDTGMKSHPYHLKIPNDGTDVWEIDPKHLKFGSKV 300
+LE +G+PS H S+ + +G+ H +P D W ++ + L G ++
Sbjct: 69 RLEGEGFPSIPLLIDHLLSTQQPLTKKSGVV---LHRAVPKDK---WVLNHEDLVLGEQI 122
Query: 301 ASGSYGDLYRGTYCSQD--VAIKVLKPERINSDMQKEFAQEVFIMRKVRHKNVVQFIGAC 358
G++G+++ G + + VA+K + E + D++ +F QE I+++ H N+V+ IG C
Sbjct: 123 GRGNFGEVFSGRLRADNTLVAVKSCR-ETLPPDLKAKFLQEARILKQYSHPNIVRLIGVC 181
Query: 359 TKPPSLCIVTEFMSGGSVYDYLHKLKGVFKLPSLLKVAIDVSKGMNYLHQNNIIHRDLKA 418
T+ + IV E + GG +L ++ +LL++ D + GM YL IHRDL A
Sbjct: 182 TQKQPIYIVMELVQGGDFLTFLRTEGARLRVKTLLQMVGDAAAGMEYLESKCCIHRDLAA 241
Query: 419 ANLLMDENEV 428
N L+ E V
Sbjct: 242 RNCLVTEKNV 251
>pdb|3BKB|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (V- Fes)
pdb|3CBL|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (v- Fes) In Complex With Staurosporine And A
Consensus Peptide
pdb|4E93|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (V- Fes)in Complex With Tae684
Length = 377
Score = 92.4 bits (228), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 56/190 (29%), Positives = 98/190 (51%), Gaps = 15/190 (7%)
Query: 247 KLERQGWPS------HRSSSPTSEPEDTGMKSHPYHLKIPNDGTDVWEIDPKHLKFGSKV 300
+LE +G+PS H S+ + +G+ H +P D W ++ + L G ++
Sbjct: 69 RLEGEGFPSIPLLIDHLLSTQQPLTKKSGVV---LHRAVPKDK---WVLNHEDLVLGEQI 122
Query: 301 ASGSYGDLYRGTYCSQD--VAIKVLKPERINSDMQKEFAQEVFIMRKVRHKNVVQFIGAC 358
G++G+++ G + + VA+K + E + D++ +F QE I+++ H N+V+ IG C
Sbjct: 123 GRGNFGEVFSGRLRADNTLVAVKSCR-ETLPPDLKAKFLQEARILKQYSHPNIVRLIGVC 181
Query: 359 TKPPSLCIVTEFMSGGSVYDYLHKLKGVFKLPSLLKVAIDVSKGMNYLHQNNIIHRDLKA 418
T+ + IV E + GG +L ++ +LL++ D + GM YL IHRDL A
Sbjct: 182 TQKQPIYIVMELVQGGDFLTFLRTEGARLRVKTLLQMVGDAAAGMEYLESKCCIHRDLAA 241
Query: 419 ANLLMDENEV 428
N L+ E V
Sbjct: 242 RNCLVTEKNV 251
>pdb|2NRY|A Chain A, Crystal Structure Of Irak-4
pdb|2NRY|B Chain B, Crystal Structure Of Irak-4
pdb|2NRY|C Chain C, Crystal Structure Of Irak-4
pdb|2NRY|D Chain D, Crystal Structure Of Irak-4
Length = 307
Score = 90.9 bits (224), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 47/133 (35%), Positives = 82/133 (61%), Gaps = 4/133 (3%)
Query: 297 GSKVASGSYGDLYRGTYCSQDVAIKVLKP--ERINSDMQKEFAQEVFIMRKVRHKNVVQF 354
G+K+ G +G +Y+G + VA+K L + +++++F QE+ +M K +H+N+V+
Sbjct: 36 GNKMGEGGFGVVYKGYVNNTTVAVKKLAAMVDITTEELKQQFDQEIKVMAKCQHENLVEL 95
Query: 355 IGACTKPPSLCIVTEFMSGGSVYDYLHKLKGVFKLPSLL--KVAIDVSKGMNYLHQNNII 412
+G + LC+V +M GS+ D L L G L + K+A + G+N+LH+N+ I
Sbjct: 96 LGFSSDGDDLCLVYVYMPNGSLLDRLSCLDGTPPLSWHMRCKIAQGAANGINFLHENHHI 155
Query: 413 HRDLKAANLLMDE 425
HRD+K+AN+L+DE
Sbjct: 156 HRDIKSANILLDE 168
>pdb|2NRU|A Chain A, Crystal Structure Of Irak-4
pdb|2NRU|B Chain B, Crystal Structure Of Irak-4
pdb|2NRU|C Chain C, Crystal Structure Of Irak-4
pdb|2NRU|D Chain D, Crystal Structure Of Irak-4
Length = 307
Score = 90.5 bits (223), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 47/133 (35%), Positives = 82/133 (61%), Gaps = 4/133 (3%)
Query: 297 GSKVASGSYGDLYRGTYCSQDVAIKVLKP--ERINSDMQKEFAQEVFIMRKVRHKNVVQF 354
G+K+ G +G +Y+G + VA+K L + +++++F QE+ +M K +H+N+V+
Sbjct: 36 GNKMGEGGFGVVYKGYVNNTTVAVKKLAAMVDITTEELKQQFDQEIKVMAKCQHENLVEL 95
Query: 355 IGACTKPPSLCIVTEFMSGGSVYDYLHKLKGVFKLPSLL--KVAIDVSKGMNYLHQNNII 412
+G + LC+V +M GS+ D L L G L + K+A + G+N+LH+N+ I
Sbjct: 96 LGFSSDGDDLCLVYVYMPNGSLLDRLSCLDGTPPLSWHMRCKIAQGAANGINFLHENHHI 155
Query: 413 HRDLKAANLLMDE 425
HRD+K+AN+L+DE
Sbjct: 156 HRDIKSANILLDE 168
>pdb|2OIB|A Chain A, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|B Chain B, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|C Chain C, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|D Chain D, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIC|A Chain A, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|B Chain B, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|C Chain C, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|D Chain D, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OID|A Chain A, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|B Chain B, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|C Chain C, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|D Chain D, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
Length = 301
Score = 90.5 bits (223), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 47/133 (35%), Positives = 82/133 (61%), Gaps = 4/133 (3%)
Query: 297 GSKVASGSYGDLYRGTYCSQDVAIKVLKP--ERINSDMQKEFAQEVFIMRKVRHKNVVQF 354
G+K+ G +G +Y+G + VA+K L + +++++F QE+ +M K +H+N+V+
Sbjct: 30 GNKMGEGGFGVVYKGYVNNTTVAVKKLAAMVDITTEELKQQFDQEIKVMAKCQHENLVEL 89
Query: 355 IGACTKPPSLCIVTEFMSGGSVYDYLHKLKGVFKLPSLL--KVAIDVSKGMNYLHQNNII 412
+G + LC+V +M GS+ D L L G L + K+A + G+N+LH+N+ I
Sbjct: 90 LGFSSDGDDLCLVYVYMPNGSLLDRLSCLDGTPPLSWHMRCKIAQGAANGINFLHENHHI 149
Query: 413 HRDLKAANLLMDE 425
HRD+K+AN+L+DE
Sbjct: 150 HRDIKSANILLDE 162
>pdb|2ZM1|A Chain A, Crystal Structure Of Imidazo Pyrazin 1 Bound To The Kinase
Domain Of Human Lck, (Auto-Phosphorylated On Tyr394)
pdb|2ZM4|A Chain A, Crystal Structure Of Imidazo Quinoxaline 1 Bound To The
Kinase Domain Of Human Lck, Activated Form (Auto-
Phosphorylated On Tyr394)
pdb|2ZYB|A Chain A, Crystal Structure Of Phenylimidazo Pyrazin 2 Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AC1|A Chain A, Crystal Structure Of Pyrazin Derivative Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AC2|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC3|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC4|A Chain A, Crystal Structure Of Triazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC5|A Chain A, Crystal Structure Of Triazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC8|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3ACJ|A Chain A, Crystal Structure Of Imidazo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3ACK|A Chain A, Crystal Structure Of Pyrrolo Pyrazine Derivative Bound To
The Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AD4|A Chain A, Crystal Structure Of Methoxy Benzofuran Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AD5|A Chain A, Crystal Structure Of Triazolone Derivative Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AD6|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
Length = 285
Score = 89.4 bits (220), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 46/144 (31%), Positives = 85/144 (59%), Gaps = 6/144 (4%)
Query: 285 DVWEIDPKHLKFGSKVASGSYGDLYRGTYCSQ-DVAIKVLKPERINSDMQKEFAQEVFIM 343
D WE+ + LK ++ +G +G+++ G Y VA+K LK ++ D F E +M
Sbjct: 12 DEWEVPRETLKLVERLGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSPDA---FLAEANLM 68
Query: 344 RKVRHKNVVQFIGACTKPPSLCIVTEFMSGGSVYDYLHKLKGV-FKLPSLLKVAIDVSKG 402
++++H+ +V+ T+ P + I+TE+M GS+ D+L G+ + LL +A +++G
Sbjct: 69 KQLQHQRLVRLYAVVTQEP-IYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEG 127
Query: 403 MNYLHQNNIIHRDLKAANLLMDEN 426
M ++ + N IHRDL+AAN+L+ +
Sbjct: 128 MAFIEERNYIHRDLRAANILVSDT 151
>pdb|3KMM|A Chain A, Structure Of Human Lck Kinase With A Small Molecule
Inhibitor
Length = 288
Score = 89.4 bits (220), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 46/144 (31%), Positives = 85/144 (59%), Gaps = 6/144 (4%)
Query: 285 DVWEIDPKHLKFGSKVASGSYGDLYRGTYCSQ-DVAIKVLKPERINSDMQKEFAQEVFIM 343
D WE+ + LK ++ +G +G+++ G Y VA+K LK ++ D F E +M
Sbjct: 15 DEWEVPRETLKLVERLGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSPDA---FLAEANLM 71
Query: 344 RKVRHKNVVQFIGACTKPPSLCIVTEFMSGGSVYDYLHKLKGV-FKLPSLLKVAIDVSKG 402
++++H+ +V+ T+ P + I+TE+M GS+ D+L G+ + LL +A +++G
Sbjct: 72 KQLQHQRLVRLYAVVTQEP-IYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEG 130
Query: 403 MNYLHQNNIIHRDLKAANLLMDEN 426
M ++ + N IHRDL+AAN+L+ +
Sbjct: 131 MAFIEERNYIHRDLRAANILVSDT 154
>pdb|3KXZ|A Chain A, The Complex Crystal Structure Of Lck With A Probe Molecule
W259
Length = 287
Score = 89.4 bits (220), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 46/144 (31%), Positives = 85/144 (59%), Gaps = 6/144 (4%)
Query: 285 DVWEIDPKHLKFGSKVASGSYGDLYRGTYCSQ-DVAIKVLKPERINSDMQKEFAQEVFIM 343
D WE+ + LK ++ +G +G+++ G Y VA+K LK ++ D F E +M
Sbjct: 14 DEWEVPRETLKLVERLGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSPDA---FLAEANLM 70
Query: 344 RKVRHKNVVQFIGACTKPPSLCIVTEFMSGGSVYDYLHKLKGV-FKLPSLLKVAIDVSKG 402
++++H+ +V+ T+ P + I+TE+M GS+ D+L G+ + LL +A +++G
Sbjct: 71 KQLQHQRLVRLYAVVTQEP-IYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEG 129
Query: 403 MNYLHQNNIIHRDLKAANLLMDEN 426
M ++ + N IHRDL+AAN+L+ +
Sbjct: 130 MAFIEERNYIHRDLRAANILVSDT 153
>pdb|3BYM|A Chain A, X-Ray Co-Crystal Structure Aminobenzimidazole Triazine 1
Bound To Lck
Length = 272
Score = 89.4 bits (220), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 46/144 (31%), Positives = 85/144 (59%), Gaps = 6/144 (4%)
Query: 285 DVWEIDPKHLKFGSKVASGSYGDLYRGTYCSQ-DVAIKVLKPERINSDMQKEFAQEVFIM 343
D WE+ + LK ++ +G +G+++ G Y VA+K LK ++ D F E +M
Sbjct: 7 DEWEVPRETLKLVERLGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSPDA---FLAEANLM 63
Query: 344 RKVRHKNVVQFIGACTKPPSLCIVTEFMSGGSVYDYLHKLKGV-FKLPSLLKVAIDVSKG 402
++++H+ +V+ T+ P + I+TE+M GS+ D+L G+ + LL +A +++G
Sbjct: 64 KQLQHQRLVRLYAVVTQEP-IYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEG 122
Query: 403 MNYLHQNNIIHRDLKAANLLMDEN 426
M ++ + N IHRDL+AAN+L+ +
Sbjct: 123 MAFIEERNYIHRDLRAANILVSDT 146
>pdb|3LCK|A Chain A, The Kinase Domain Of Human Lymphocyte Kinase (Lck),
Activated Form (Auto-Phosphorylated On Tyr394)
pdb|3BYO|A Chain A, X-Ray Co-Crystal Structure Of 2-Amino-6-Phenylpyrimido[5',
4':5,6]pyrimido[1,2-A]benzimidazol-5(6h)-One 25 Bound To
Lck
Length = 271
Score = 89.4 bits (220), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 46/144 (31%), Positives = 85/144 (59%), Gaps = 6/144 (4%)
Query: 285 DVWEIDPKHLKFGSKVASGSYGDLYRGTYCSQ-DVAIKVLKPERINSDMQKEFAQEVFIM 343
D WE+ + LK ++ +G +G+++ G Y VA+K LK ++ D F E +M
Sbjct: 6 DEWEVPRETLKLVERLGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSPDA---FLAEANLM 62
Query: 344 RKVRHKNVVQFIGACTKPPSLCIVTEFMSGGSVYDYLHKLKGV-FKLPSLLKVAIDVSKG 402
++++H+ +V+ T+ P + I+TE+M GS+ D+L G+ + LL +A +++G
Sbjct: 63 KQLQHQRLVRLYAVVTQEP-IYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEG 121
Query: 403 MNYLHQNNIIHRDLKAANLLMDEN 426
M ++ + N IHRDL+AAN+L+ +
Sbjct: 122 MAFIEERNYIHRDLRAANILVSDT 145
>pdb|1QPE|A Chain A, Structural Analysis Of The Lymphocyte-Specific Kinase Lck
In Complex With Non-Selective And Src Family Selective
Kinase Inhibitors
pdb|1QPJ|A Chain A, Crystal Structure Of The Lymphocyte-Specific Kinase Lck In
Complex With Staurosporine.
pdb|1QPC|A Chain A, Structural Analysis Of The Lymphocyte-Specific Kinase Lck
In Complex With Non-Selective And Src Family Selective
Kinase Inhibitors
Length = 279
Score = 89.4 bits (220), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 46/144 (31%), Positives = 85/144 (59%), Gaps = 6/144 (4%)
Query: 285 DVWEIDPKHLKFGSKVASGSYGDLYRGTYCSQ-DVAIKVLKPERINSDMQKEFAQEVFIM 343
D WE+ + LK ++ +G +G+++ G Y VA+K LK ++ D F E +M
Sbjct: 6 DEWEVPRETLKLVERLGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSPDA---FLAEANLM 62
Query: 344 RKVRHKNVVQFIGACTKPPSLCIVTEFMSGGSVYDYLHKLKGV-FKLPSLLKVAIDVSKG 402
++++H+ +V+ T+ P + I+TE+M GS+ D+L G+ + LL +A +++G
Sbjct: 63 KQLQHQRLVRLYAVVTQEP-IYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEG 121
Query: 403 MNYLHQNNIIHRDLKAANLLMDEN 426
M ++ + N IHRDL+AAN+L+ +
Sbjct: 122 MAFIEERNYIHRDLRAANILVSDT 145
>pdb|3BYS|A Chain A, Co-Crystal Structure Of Lck And Aminopyrimidine Amide 10b
pdb|3BYU|A Chain A, Co-Crystal Structure Of Lck And Aminopyrimidine Reverse
Amide 23
Length = 277
Score = 89.4 bits (220), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 46/144 (31%), Positives = 85/144 (59%), Gaps = 6/144 (4%)
Query: 285 DVWEIDPKHLKFGSKVASGSYGDLYRGTYCSQ-DVAIKVLKPERINSDMQKEFAQEVFIM 343
D WE+ + LK ++ +G +G+++ G Y VA+K LK ++ D F E +M
Sbjct: 12 DEWEVPRETLKLVERLGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSPDA---FLAEANLM 68
Query: 344 RKVRHKNVVQFIGACTKPPSLCIVTEFMSGGSVYDYLHKLKGV-FKLPSLLKVAIDVSKG 402
++++H+ +V+ T+ P + I+TE+M GS+ D+L G+ + LL +A +++G
Sbjct: 69 KQLQHQRLVRLYAVVTQEP-IYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEG 127
Query: 403 MNYLHQNNIIHRDLKAANLLMDEN 426
M ++ + N IHRDL+AAN+L+ +
Sbjct: 128 MAFIEERNYIHRDLRAANILVSDT 151
>pdb|2OFU|A Chain A, X-Ray Crystal Structure Of 2-Aminopyrimidine Carbamate 43
Bound To Lck
Length = 273
Score = 89.4 bits (220), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 46/144 (31%), Positives = 85/144 (59%), Gaps = 6/144 (4%)
Query: 285 DVWEIDPKHLKFGSKVASGSYGDLYRGTYCSQ-DVAIKVLKPERINSDMQKEFAQEVFIM 343
D WE+ + LK ++ +G +G+++ G Y VA+K LK ++ D F E +M
Sbjct: 8 DEWEVPRETLKLVERLGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSPDA---FLAEANLM 64
Query: 344 RKVRHKNVVQFIGACTKPPSLCIVTEFMSGGSVYDYLHKLKGV-FKLPSLLKVAIDVSKG 402
++++H+ +V+ T+ P + I+TE+M GS+ D+L G+ + LL +A +++G
Sbjct: 65 KQLQHQRLVRLYAVVTQEP-IYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEG 123
Query: 403 MNYLHQNNIIHRDLKAANLLMDEN 426
M ++ + N IHRDL+AAN+L+ +
Sbjct: 124 MAFIEERNYIHRDLRAANILVSDT 147
>pdb|2OFV|A Chain A, Crystal Structure Of Aminoquinazoline 1 Bound To Lck
pdb|2OFV|B Chain B, Crystal Structure Of Aminoquinazoline 1 Bound To Lck
pdb|3B2W|A Chain A, Crystal Structure Of Pyrimidine Amide 11 Bound To Lck
Length = 277
Score = 89.4 bits (220), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 46/144 (31%), Positives = 85/144 (59%), Gaps = 6/144 (4%)
Query: 285 DVWEIDPKHLKFGSKVASGSYGDLYRGTYCSQ-DVAIKVLKPERINSDMQKEFAQEVFIM 343
D WE+ + LK ++ +G +G+++ G Y VA+K LK ++ D F E +M
Sbjct: 11 DEWEVPRETLKLVERLGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSPDA---FLAEANLM 67
Query: 344 RKVRHKNVVQFIGACTKPPSLCIVTEFMSGGSVYDYLHKLKGV-FKLPSLLKVAIDVSKG 402
++++H+ +V+ T+ P + I+TE+M GS+ D+L G+ + LL +A +++G
Sbjct: 68 KQLQHQRLVRLYAVVTQEP-IYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEG 126
Query: 403 MNYLHQNNIIHRDLKAANLLMDEN 426
M ++ + N IHRDL+AAN+L+ +
Sbjct: 127 MAFIEERNYIHRDLRAANILVSDT 150
>pdb|2PL0|A Chain A, Lck Bound To Imatinib
Length = 289
Score = 89.0 bits (219), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 46/144 (31%), Positives = 85/144 (59%), Gaps = 6/144 (4%)
Query: 285 DVWEIDPKHLKFGSKVASGSYGDLYRGTYCSQ-DVAIKVLKPERINSDMQKEFAQEVFIM 343
D WE+ + LK ++ +G +G+++ G Y VA+K LK ++ D F E +M
Sbjct: 16 DEWEVPRETLKLVERLGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSPDA---FLAEANLM 72
Query: 344 RKVRHKNVVQFIGACTKPPSLCIVTEFMSGGSVYDYLHKLKGV-FKLPSLLKVAIDVSKG 402
++++H+ +V+ T+ P + I+TE+M GS+ D+L G+ + LL +A +++G
Sbjct: 73 KQLQHQRLVRLYAVVTQEP-IYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEG 131
Query: 403 MNYLHQNNIIHRDLKAANLLMDEN 426
M ++ + N IHRDL+AAN+L+ +
Sbjct: 132 MAFIEERNYIHRDLRAANILVSDT 155
>pdb|2OF2|A Chain A, Crystal Structure Of Furanopyrimidine 8 Bound To Lck
pdb|2OF4|A Chain A, Crystal Structure Of Furanopyrimidine 1 Bound To Lck
Length = 271
Score = 89.0 bits (219), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 46/144 (31%), Positives = 85/144 (59%), Gaps = 6/144 (4%)
Query: 285 DVWEIDPKHLKFGSKVASGSYGDLYRGTYCSQ-DVAIKVLKPERINSDMQKEFAQEVFIM 343
D WE+ + LK ++ +G +G+++ G Y VA+K LK ++ D F E +M
Sbjct: 6 DEWEVPRETLKLVERLGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSPDA---FLAEANLM 62
Query: 344 RKVRHKNVVQFIGACTKPPSLCIVTEFMSGGSVYDYLHKLKGV-FKLPSLLKVAIDVSKG 402
++++H+ +V+ T+ P + I+TE+M GS+ D+L G+ + LL +A +++G
Sbjct: 63 KQLQHQRLVRLYAVVTQEP-IYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEG 121
Query: 403 MNYLHQNNIIHRDLKAANLLMDEN 426
M ++ + N IHRDL+AAN+L+ +
Sbjct: 122 MAFIEERNYIHRDLRAANILVSDT 145
>pdb|2OG8|A Chain A, Crystal Structure Of Aminoquinazoline 36 Bound To Lck
pdb|2OG8|B Chain B, Crystal Structure Of Aminoquinazoline 36 Bound To Lck
Length = 265
Score = 89.0 bits (219), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 46/144 (31%), Positives = 85/144 (59%), Gaps = 6/144 (4%)
Query: 285 DVWEIDPKHLKFGSKVASGSYGDLYRGTYCSQ-DVAIKVLKPERINSDMQKEFAQEVFIM 343
D WE+ + LK ++ +G +G+++ G Y VA+K LK ++ D F E +M
Sbjct: 1 DEWEVPRETLKLVERLGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSPDA---FLAEANLM 57
Query: 344 RKVRHKNVVQFIGACTKPPSLCIVTEFMSGGSVYDYLHKLKGV-FKLPSLLKVAIDVSKG 402
++++H+ +V+ T+ P + I+TE+M GS+ D+L G+ + LL +A +++G
Sbjct: 58 KQLQHQRLVRLYAVVTQEP-IYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEG 116
Query: 403 MNYLHQNNIIHRDLKAANLLMDEN 426
M ++ + N IHRDL+AAN+L+ +
Sbjct: 117 MAFIEERNYIHRDLRAANILVSDT 140
>pdb|1QPD|A Chain A, Structural Analysis Of The Lymphocyte-specific Kinase Lck
In Complex With Non-selective And Src Family Selective
Kinase Inhibitors
Length = 279
Score = 88.2 bits (217), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 46/144 (31%), Positives = 84/144 (58%), Gaps = 6/144 (4%)
Query: 285 DVWEIDPKHLKFGSKVASGSYGDLYRGTYCSQ-DVAIKVLKPERINSDMQKEFAQEVFIM 343
D WE+ + LK ++ +G G+++ G Y VA+K LK ++ D F E +M
Sbjct: 6 DAWEVPRETLKLVERLGAGQAGEVWMGYYNGHTKVAVKSLKQGSMSPDA---FLAEANLM 62
Query: 344 RKVRHKNVVQFIGACTKPPSLCIVTEFMSGGSVYDYLHKLKGV-FKLPSLLKVAIDVSKG 402
++++H+ +V+ T+ P + I+TE+M GS+ D+L G+ + LL +A +++G
Sbjct: 63 KQLQHQRLVRLYAVVTQEP-IYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEG 121
Query: 403 MNYLHQNNIIHRDLKAANLLMDEN 426
M ++ + N IHRDL+AAN+L+ +
Sbjct: 122 MAFIEERNYIHRDLRAANILVSDT 145
>pdb|4HZS|A Chain A, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
pdb|4HZS|B Chain B, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
pdb|4HZS|C Chain C, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
pdb|4HZS|D Chain D, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
Length = 341
Score = 87.0 bits (214), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 51/141 (36%), Positives = 79/141 (56%), Gaps = 7/141 (4%)
Query: 289 IDPKHLKFGSKVASGSYGDLYRGTY-----CSQDVAIKVLKPERINS-DMQKEFAQEVFI 342
I K L+ K+ GS+G + RG + + VA+K LKP+ ++ + +F +EV
Sbjct: 9 IGEKDLRLLEKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNA 68
Query: 343 MRKVRHKNVVQFIGACTKPPSLCIVTEFMSGGSVYDYLHKLKGVFKLPSLLKVAIDVSKG 402
M + H+N+++ G PP + +VTE GS+ D L K +G F L +L + A+ V++G
Sbjct: 69 MHSLDHRNLIRLYGVVLTPP-MKMVTELAPLGSLLDRLRKHQGHFLLGTLSRYAVQVAEG 127
Query: 403 MNYLHQNNIIHRDLKAANLLM 423
M YL IHRDL A NLL+
Sbjct: 128 MGYLESKRFIHRDLAARNLLL 148
>pdb|4EWH|B Chain B, Co-Crystal Structure Of Ack1 With Inhibitor
pdb|4EWH|A Chain A, Co-Crystal Structure Of Ack1 With Inhibitor
Length = 275
Score = 86.7 bits (213), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 51/141 (36%), Positives = 79/141 (56%), Gaps = 7/141 (4%)
Query: 289 IDPKHLKFGSKVASGSYGDLYRGTY-----CSQDVAIKVLKPERINS-DMQKEFAQEVFI 342
I K L+ K+ GS+G + RG + + VA+K LKP+ ++ + +F +EV
Sbjct: 5 IGEKDLRLLEKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNA 64
Query: 343 MRKVRHKNVVQFIGACTKPPSLCIVTEFMSGGSVYDYLHKLKGVFKLPSLLKVAIDVSKG 402
M + H+N+++ G PP + +VTE GS+ D L K +G F L +L + A+ V++G
Sbjct: 65 MHSLDHRNLIRLYGVVLTPP-MKMVTELAPLGSLLDRLRKHQGHFLLGTLSRYAVQVAEG 123
Query: 403 MNYLHQNNIIHRDLKAANLLM 423
M YL IHRDL A NLL+
Sbjct: 124 MGYLESKRFIHRDLAARNLLL 144
>pdb|1U54|A Chain A, Crystal Structures Of The Phosphorylated And
Unphosphorylated Kinase Domains Of The Cdc42-Associated
Tyrosine Kinase Ack1 Bound To Amp-Pcp
Length = 291
Score = 86.7 bits (213), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 51/141 (36%), Positives = 79/141 (56%), Gaps = 7/141 (4%)
Query: 289 IDPKHLKFGSKVASGSYGDLYRGTY-----CSQDVAIKVLKPERINS-DMQKEFAQEVFI 342
I K L+ K+ GS+G + RG + + VA+K LKP+ ++ + +F +EV
Sbjct: 15 IGEKDLRLLEKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNA 74
Query: 343 MRKVRHKNVVQFIGACTKPPSLCIVTEFMSGGSVYDYLHKLKGVFKLPSLLKVAIDVSKG 402
M + H+N+++ G PP + +VTE GS+ D L K +G F L +L + A+ V++G
Sbjct: 75 MHSLDHRNLIRLYGVVLTPP-MKMVTELAPLGSLLDRLRKHQGHFLLGTLSRYAVQVAEG 133
Query: 403 MNYLHQNNIIHRDLKAANLLM 423
M YL IHRDL A NLL+
Sbjct: 134 MGYLESKRFIHRDLAARNLLL 154
>pdb|4HZR|A Chain A, Crystal Structure Of Ack1 Kinase Domain
pdb|4HZR|B Chain B, Crystal Structure Of Ack1 Kinase Domain
Length = 277
Score = 86.7 bits (213), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 51/141 (36%), Positives = 79/141 (56%), Gaps = 7/141 (4%)
Query: 289 IDPKHLKFGSKVASGSYGDLYRGTY-----CSQDVAIKVLKPERINS-DMQKEFAQEVFI 342
I K L+ K+ GS+G + RG + + VA+K LKP+ ++ + +F +EV
Sbjct: 9 IGEKDLRLLEKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNA 68
Query: 343 MRKVRHKNVVQFIGACTKPPSLCIVTEFMSGGSVYDYLHKLKGVFKLPSLLKVAIDVSKG 402
M + H+N+++ G PP + +VTE GS+ D L K +G F L +L + A+ V++G
Sbjct: 69 MHSLDHRNLIRLYGVVLTPP-MKMVTELAPLGSLLDRLRKHQGHFLLGTLSRYAVQVAEG 127
Query: 403 MNYLHQNNIIHRDLKAANLLM 423
M YL IHRDL A NLL+
Sbjct: 128 MGYLESKRFIHRDLAARNLLL 148
>pdb|3EQP|B Chain B, Crystal Structure Of Ack1 With Compound T95
pdb|3EQP|A Chain A, Crystal Structure Of Ack1 With Compound T95
pdb|3EQR|A Chain A, Crystal Structure Of Ack1 With Compound T74
pdb|3EQR|B Chain B, Crystal Structure Of Ack1 With Compound T74
Length = 276
Score = 86.7 bits (213), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 51/141 (36%), Positives = 79/141 (56%), Gaps = 7/141 (4%)
Query: 289 IDPKHLKFGSKVASGSYGDLYRGTY-----CSQDVAIKVLKPERINS-DMQKEFAQEVFI 342
I K L+ K+ GS+G + RG + + VA+K LKP+ ++ + +F +EV
Sbjct: 5 IGEKDLRLLEKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNA 64
Query: 343 MRKVRHKNVVQFIGACTKPPSLCIVTEFMSGGSVYDYLHKLKGVFKLPSLLKVAIDVSKG 402
M + H+N+++ G PP + +VTE GS+ D L K +G F L +L + A+ V++G
Sbjct: 65 MHSLDHRNLIRLYGVVLTPP-MKMVTELAPLGSLLDRLRKHQGHFLLGTLSRYAVQVAEG 123
Query: 403 MNYLHQNNIIHRDLKAANLLM 423
M YL IHRDL A NLL+
Sbjct: 124 MGYLESKRFIHRDLAARNLLL 144
>pdb|1U46|A Chain A, Crystal Structure Of The Unphosphorylated Kinase Domain Of
The Tyrosine Kinase Ack1
pdb|1U46|B Chain B, Crystal Structure Of The Unphosphorylated Kinase Domain Of
The Tyrosine Kinase Ack1
pdb|1U4D|A Chain A, Structure Of The Ack1 Kinase Domain Bound To
Debromohymenialdisine
pdb|1U4D|B Chain B, Structure Of The Ack1 Kinase Domain Bound To
Debromohymenialdisine
pdb|1U54|B Chain B, Crystal Structures Of The Phosphorylated And
Unphosphorylated Kinase Domains Of The Cdc42-Associated
Tyrosine Kinase Ack1 Bound To Amp-Pcp
Length = 291
Score = 86.7 bits (213), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 51/141 (36%), Positives = 79/141 (56%), Gaps = 7/141 (4%)
Query: 289 IDPKHLKFGSKVASGSYGDLYRGTY-----CSQDVAIKVLKPERINS-DMQKEFAQEVFI 342
I K L+ K+ GS+G + RG + + VA+K LKP+ ++ + +F +EV
Sbjct: 15 IGEKDLRLLEKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNA 74
Query: 343 MRKVRHKNVVQFIGACTKPPSLCIVTEFMSGGSVYDYLHKLKGVFKLPSLLKVAIDVSKG 402
M + H+N+++ G PP + +VTE GS+ D L K +G F L +L + A+ V++G
Sbjct: 75 MHSLDHRNLIRLYGVVLTPP-MKMVTELAPLGSLLDRLRKHQGHFLLGTLSRYAVQVAEG 133
Query: 403 MNYLHQNNIIHRDLKAANLLM 423
M YL IHRDL A NLL+
Sbjct: 134 MGYLESKRFIHRDLAARNLLL 154
>pdb|4ID7|A Chain A, Ack1 Kinase In Complex With The Inhibitor
Cis-3-[8-amino-1-(4-
Phenoxyphenyl)imidazo[1,5-a]pyrazin-3-yl]cyclobutanol
Length = 273
Score = 86.3 bits (212), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 51/141 (36%), Positives = 79/141 (56%), Gaps = 7/141 (4%)
Query: 289 IDPKHLKFGSKVASGSYGDLYRGTY-----CSQDVAIKVLKPERINS-DMQKEFAQEVFI 342
I K L+ K+ GS+G + RG + + VA+K LKP+ ++ + +F +EV
Sbjct: 5 IGEKDLRLLEKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNA 64
Query: 343 MRKVRHKNVVQFIGACTKPPSLCIVTEFMSGGSVYDYLHKLKGVFKLPSLLKVAIDVSKG 402
M + H+N+++ G PP + +VTE GS+ D L K +G F L +L + A+ V++G
Sbjct: 65 MHSLDHRNLIRLYGVVLTPP-MKMVTELAPLGSLLDRLRKHQGHFLLGTLSRYAVQVAEG 123
Query: 403 MNYLHQNNIIHRDLKAANLLM 423
M YL IHRDL A NLL+
Sbjct: 124 MGYLESKRFIHRDLAARNLLL 144
>pdb|3MPM|A Chain A, Lck Complexed With A Pyrazolopyrimidine
Length = 267
Score = 85.9 bits (211), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 44/142 (30%), Positives = 84/142 (59%), Gaps = 6/142 (4%)
Query: 287 WEIDPKHLKFGSKVASGSYGDLYRGTYCSQ-DVAIKVLKPERINSDMQKEFAQEVFIMRK 345
WE+ + LK ++ +G +G+++ G Y VA+K LK ++ D F E +M++
Sbjct: 4 WEVPRETLKLVERLGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSPDA---FLAEANLMKQ 60
Query: 346 VRHKNVVQFIGACTKPPSLCIVTEFMSGGSVYDYLHKLKGV-FKLPSLLKVAIDVSKGMN 404
++H+ +V+ T+ P + I+TE+M GS+ D+L G+ + LL +A +++GM
Sbjct: 61 LQHQRLVRLYAVVTQEP-IYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMA 119
Query: 405 YLHQNNIIHRDLKAANLLMDEN 426
++ + N IHR+L+AAN+L+ +
Sbjct: 120 FIEERNYIHRNLRAANILVSDT 141
>pdb|2O8Y|A Chain A, Apo Irak4 Kinase Domain
pdb|2O8Y|B Chain B, Apo Irak4 Kinase Domain
Length = 298
Score = 85.5 bits (210), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 45/133 (33%), Positives = 78/133 (58%), Gaps = 4/133 (3%)
Query: 297 GSKVASGSYGDLYRGTYCSQDVAIKVLKP--ERINSDMQKEFAQEVFIMRKVRHKNVVQF 354
G+K G +G +Y+G + VA+K L + +++++F QE+ + K +H+N+V+
Sbjct: 27 GNKXGEGGFGVVYKGYVNNTTVAVKKLAAMVDITTEELKQQFDQEIKVXAKCQHENLVEL 86
Query: 355 IGACTKPPSLCIVTEFMSGGSVYDYLHKLKGVFKLP--SLLKVAIDVSKGMNYLHQNNII 412
+G + LC+V + GS+ D L L G L K+A + G+N+LH+N+ I
Sbjct: 87 LGFSSDGDDLCLVYVYXPNGSLLDRLSCLDGTPPLSWHXRCKIAQGAANGINFLHENHHI 146
Query: 413 HRDLKAANLLMDE 425
HRD+K+AN+L+DE
Sbjct: 147 HRDIKSANILLDE 159
>pdb|3SXR|A Chain A, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complex With Dasatinib
pdb|3SXR|B Chain B, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complex With Dasatinib
pdb|3SXS|A Chain A, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complexed With Pp2
Length = 268
Score = 84.3 bits (207), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 48/140 (34%), Positives = 78/140 (55%), Gaps = 4/140 (2%)
Query: 288 EIDPKHLKFGSKVASGSYGDLYRGTYCSQ-DVAIKVLKPERINSDMQKEFAQEVFIMRKV 346
E+ + + ++ SG +G + G + Q DVA+K++K ++ D EF QE M K+
Sbjct: 4 ELKREEITLLKELGSGQFGVVKLGKWKGQYDVAVKMIKEGSMSED---EFFQEAQTMMKL 60
Query: 347 RHKNVVQFIGACTKPPSLCIVTEFMSGGSVYDYLHKLKGVFKLPSLLKVAIDVSKGMNYL 406
H +V+F G C+K + IVTE++S G + +YL + LL++ DV +GM +L
Sbjct: 61 SHPKLVKFYGVCSKEYPIYIVTEYISNGCLLNYLRSHGKGLEPSQLLEMCYDVCEGMAFL 120
Query: 407 HQNNIIHRDLKAANLLMDEN 426
+ IHRDL A N L+D +
Sbjct: 121 ESHQFIHRDLAARNCLVDRD 140
>pdb|3DTC|A Chain A, Crystal Structure Of Mixed-Lineage Kinase Mlk1 Complexed
With Compound 16
Length = 271
Score = 84.3 bits (207), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 47/143 (32%), Positives = 77/143 (53%), Gaps = 11/143 (7%)
Query: 288 EIDPKHLKFGSKVASGSYGDLYRGTYCSQDVAIKVLK--PERINSDMQKEFAQEVFIMRK 345
EID L + G +G +YR + +VA+K + P+ S + QE +
Sbjct: 3 EIDFAELTLEEIIGIGGFGKVYRAFWIGDEVAVKAARHDPDEDISQTIENVRQEAKLFAM 62
Query: 346 VRHKNVVQFIGACTKPPSLCIVTEFMSGGSVYDYLHKLKGVFKLPS--LLKVAIDVSKGM 403
++H N++ G C K P+LC+V EF GG L+++ ++P L+ A+ +++GM
Sbjct: 63 LKHPNIIALRGVCLKEPNLCLVMEFARGGP----LNRVLSGKRIPPDILVNWAVQIARGM 118
Query: 404 NYLHQNN---IIHRDLKAANLLM 423
NYLH IIHRDLK++N+L+
Sbjct: 119 NYLHDEAIVPIIHRDLKSSNILI 141
>pdb|2X7F|A Chain A, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|B Chain B, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|C Chain C, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|D Chain D, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|E Chain E, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
Length = 326
Score = 84.3 bits (207), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 64/198 (32%), Positives = 102/198 (51%), Gaps = 27/198 (13%)
Query: 300 VASGSYGDLYRGTY--CSQDVAIKVLKPERINSDMQKEFAQEVFIMRKV-RHKNVVQFIG 356
V +G+YG +Y+G + Q AIKV+ + D ++E QE+ +++K H+N+ + G
Sbjct: 32 VGNGTYGQVYKGRHVKTGQLAAIKVMD---VTGDEEEEIKQEINMLKKYSHHRNIATYYG 88
Query: 357 ACTK--PPS----LCIVTEFMSGGSVYDYLHKLKG-VFKLPSLLKVAIDVSKGMNYLHQN 409
A K PP L +V EF GSV D + KG K + + ++ +G+++LHQ+
Sbjct: 89 AFIKKNPPGMDDQLWLVMEFCGAGSVTDLIKNTKGNTLKEEWIAYICREILRGLSHLHQH 148
Query: 410 NIIHRDLKAANLLMDENEVSLLLSLCLFTVSI-LFCGKGRELISLFLGNDVLLQFGTYWI 468
+IHRD+K N+L+ EN + L F VS L GR + F+G YW+
Sbjct: 149 KVIHRDIKGQNVLLTENAE---VKLVDFGVSAQLDRTVGRR--NTFIGT-------PYWM 196
Query: 469 IFRRSSCDKKNSDAPFLF 486
+CD +N DA + F
Sbjct: 197 APEVIACD-ENPDATYDF 213
>pdb|3S95|A Chain A, Crystal Structure Of The Human Limk1 Kinase Domain In
Complex With Staurosporine
pdb|3S95|B Chain B, Crystal Structure Of The Human Limk1 Kinase Domain In
Complex With Staurosporine
Length = 310
Score = 83.2 bits (204), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 43/137 (31%), Positives = 72/137 (52%)
Query: 291 PKHLKFGSKVASGSYGDLYRGTYCSQDVAIKVLKPERINSDMQKEFAQEVFIMRKVRHKN 350
P L G + G +G + T+ + + + R + + Q+ F +EV +MR + H N
Sbjct: 9 PSDLIHGEVLGKGCFGQAIKVTHRETGEVMVMKELIRFDEETQRTFLKEVKVMRCLEHPN 68
Query: 351 VVQFIGACTKPPSLCIVTEFMSGGSVYDYLHKLKGVFKLPSLLKVAIDVSKGMNYLHQNN 410
V++FIG K L +TE++ GG++ + + + + A D++ GM YLH N
Sbjct: 69 VLKFIGVLYKDKRLNFITEYIKGGTLRGIIKSMDSQYPWSQRVSFAKDIASGMAYLHSMN 128
Query: 411 IIHRDLKAANLLMDENE 427
IIHRDL + N L+ EN+
Sbjct: 129 IIHRDLNSHNCLVRENK 145
>pdb|4E4L|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|E Chain E, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|D Chain D, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4N|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 49
pdb|4E4N|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 49
pdb|4E5W|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 26
pdb|4E5W|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 26
pdb|4EHZ|A Chain A, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|B Chain B, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|C Chain C, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|D Chain D, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EI4|A Chain A, Jak1 Kinase (jh1 Domain) In Complex With Compound 20
pdb|4EI4|B Chain B, Jak1 Kinase (jh1 Domain) In Complex With Compound 20
pdb|4FK6|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 72
pdb|4FK6|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 72
Length = 302
Score = 80.9 bits (198), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 53/157 (33%), Positives = 87/157 (55%), Gaps = 15/157 (9%)
Query: 288 EIDPKH-----LKFGSKVASGSYG--DLYR----GTYCSQDVAIKVLKPERINSDMQKEF 336
E+DP H LK + G +G +L R G + VA+K LKPE + + +
Sbjct: 12 EVDPTHFEKRFLKRIRDLGEGHFGKVELCRYDPEGDNTGEQVAVKSLKPESGGNHIA-DL 70
Query: 337 AQEVFIMRKVRHKNVVQFIGACTKPPS--LCIVTEFMSGGSVYDYLHKLKGVFKLPSLLK 394
+E+ I+R + H+N+V++ G CT+ + ++ EF+ GS+ +YL K K L LK
Sbjct: 71 KKEIEILRNLYHENIVKYKGICTEDGGNGIKLIMEFLPSGSLKEYLPKNKNKINLKQQLK 130
Query: 395 VAIDVSKGMNYLHQNNIIHRDLKAANLLMD-ENEVSL 430
A+ + KGM+YL +HRDL A N+L++ E++V +
Sbjct: 131 YAVQICKGMDYLGSRQYVHRDLAARNVLVESEHQVKI 167
>pdb|2J0J|A Chain A, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains
Length = 656
Score = 79.7 bits (195), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 56/223 (25%), Positives = 107/223 (47%), Gaps = 27/223 (12%)
Query: 225 VVDGWPYEETEQLRAALEKEVLKLERQGWPSHRSSSPTSEPEDTGMKSHPYHLKIPNDGT 284
++DG+ + A + +++ +++G + S + E G++SH + +D
Sbjct: 313 LIDGY----CRLVNGATQSFIIRPQKEGERALPSIPKLANNEKQGVRSHTVSVSETDDYA 368
Query: 285 DV--------------WEIDPKHLKFGSKVASGSYGDLYRGTYCSQD-----VAIKVLKP 325
++ +EI + ++ G + G +GD+++G Y S + VAIK K
Sbjct: 369 EIIDEEDTYTMPSTRDYEIQRERIELGRCIGEGQFGDVHQGIYMSPENPAMAVAIKTCK- 427
Query: 326 ERINSD-MQKEFAQEVFIMRKVRHKNVVQFIGACTKPPSLCIVTEFMSGGSVYDYLHKLK 384
SD ++++F QE MR+ H ++V+ IG T+ P + I+ E + G + +L K
Sbjct: 428 -NCTSDSVREKFLQEALTMRQFDHPHIVKLIGVITENP-VWIIMELCTLGELRSFLQVRK 485
Query: 385 GVFKLPSLLKVAIDVSKGMNYLHQNNIIHRDLKAANLLMDENE 427
L SL+ A +S + YL +HRD+ A N+L+ N+
Sbjct: 486 FSLDLASLILYAYQLSTALAYLESKRFVHRDIAARNVLVSSND 528
>pdb|4GS6|A Chain A, Irreversible Inhibition Of Tak1 Kinase By 5z-7-oxozeaenol
Length = 315
Score = 79.3 bits (194), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 49/157 (31%), Positives = 83/157 (52%), Gaps = 13/157 (8%)
Query: 289 IDPKHLKFGSKVASGSYGDLYRGTYCSQDVAIKVLKPERINSDMQKEFAQEVFIMRKVRH 348
ID K ++ V G++G + + + ++DVAIK ++ E +K F E+ + +V H
Sbjct: 6 IDYKEIEVEEVVGRGAFGVVCKAKWRAKDVAIKQIESE----SERKAFIVELRQLSRVNH 61
Query: 349 KNVVQFIGACTKPPSLCIVTEFMSGGSVYDYLHKLKGV--FKLPSLLKVAIDVSKGMNYL 406
N+V+ GAC P +C+V E+ GGS+Y+ LH + + + + + S+G+ YL
Sbjct: 62 PNIVKLYGACLNP--VCLVMEYAEGGSLYNVLHGAEPLPYYTAAHAMSWCLQCSQGVAYL 119
Query: 407 HQ---NNIIHRDLKAANLLMDENEVSLLLSLCLFTVS 440
H +IHRDLK NLL+ +L +C F +
Sbjct: 120 HSMQPKALIHRDLKPPNLLLVAG--GTVLKICDFGTA 154
>pdb|2EVA|A Chain A, Structural Basis For The Interaction Of Tak1 Kinase With
Its Activating Protein Tab1
pdb|2YIY|A Chain A, Crystal Structure Of Compound 8 Bound To Tak1-Tab
Length = 307
Score = 79.3 bits (194), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 49/157 (31%), Positives = 83/157 (52%), Gaps = 13/157 (8%)
Query: 289 IDPKHLKFGSKVASGSYGDLYRGTYCSQDVAIKVLKPERINSDMQKEFAQEVFIMRKVRH 348
ID K ++ V G++G + + + ++DVAIK ++ E +K F E+ + +V H
Sbjct: 5 IDYKEIEVEEVVGRGAFGVVCKAKWRAKDVAIKQIESE----SERKAFIVELRQLSRVNH 60
Query: 349 KNVVQFIGACTKPPSLCIVTEFMSGGSVYDYLHKLKGV--FKLPSLLKVAIDVSKGMNYL 406
N+V+ GAC P +C+V E+ GGS+Y+ LH + + + + + S+G+ YL
Sbjct: 61 PNIVKLYGACLNP--VCLVMEYAEGGSLYNVLHGAEPLPYYTAAHAMSWCLQCSQGVAYL 118
Query: 407 HQ---NNIIHRDLKAANLLMDENEVSLLLSLCLFTVS 440
H +IHRDLK NLL+ +L +C F +
Sbjct: 119 HSMQPKALIHRDLKPPNLLLVAG--GTVLKICDFGTA 153
>pdb|1JPA|A Chain A, Crystal Structure Of Unphosphorylated Ephb2 Receptor
Tyrosine Kinase And Juxtamembrane Region
pdb|1JPA|B Chain B, Crystal Structure Of Unphosphorylated Ephb2 Receptor
Tyrosine Kinase And Juxtamembrane Region
Length = 312
Score = 79.3 bits (194), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 54/169 (31%), Positives = 83/169 (49%), Gaps = 10/169 (5%)
Query: 269 GMKSH--PYHLKIPNDGTDVW--EIDPKHLKFGSKVASGSYGDLYRGTYCSQD-----VA 319
GMK P+ + PN+ + EID +K + +G +G++ G VA
Sbjct: 6 GMKIFIDPFTFEDPNEAVREFAKEIDISCVKIEQVIGAGEFGEVCSGHLKLPGKREIFVA 65
Query: 320 IKVLKPERINSDMQKEFAQEVFIMRKVRHKNVVQFIGACTKPPSLCIVTEFMSGGSVYDY 379
IK LK +++F E IM + H NV+ G TK + I+TEFM GS+ +
Sbjct: 66 IKTLK-SGYTEKQRRDFLSEASIMGQFDHPNVIHLEGVVTKSTPVMIITEFMENGSLDSF 124
Query: 380 LHKLKGVFKLPSLLKVAIDVSKGMNYLHQNNIIHRDLKAANLLMDENEV 428
L + G F + L+ + ++ GM YL N +HRDL A N+L++ N V
Sbjct: 125 LRQNDGQFTVIQLVGMLRGIAAGMKYLADMNYVHRDLAARNILVNSNLV 173
>pdb|2R4B|A Chain A, Erbb4 Kinase Domain Complexed With A Thienopyrimidine
Inhibitor
pdb|2R4B|B Chain B, Erbb4 Kinase Domain Complexed With A Thienopyrimidine
Inhibitor
Length = 321
Score = 78.6 bits (192), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 44/136 (32%), Positives = 73/136 (53%), Gaps = 8/136 (5%)
Query: 294 LKFGSKVASGSYGDLYRGTYCSQD------VAIKVLKPERINSDMQKEFAQEVFIMRKVR 347
LK + SG++G +Y+G + + VAIK+L E EF E IM +
Sbjct: 40 LKRVKVLGSGAFGTVYKGIWVPEGETVKIPVAIKILN-ETTGPKANVEFMDEALIMASMD 98
Query: 348 HKNVVQFIGACTKPPSLCIVTEFMSGGSVYDYLHKLKGVFKLPSLLKVAIDVSKGMNYLH 407
H ++V+ +G C P ++ +VT+ M G + +Y+H+ K LL + ++KGM YL
Sbjct: 99 HPHLVRLLGVCLSP-TIQLVTQLMPHGCLLEYVHEHKDNIGSQLLLNWCVQIAKGMMYLE 157
Query: 408 QNNIIHRDLKAANLLM 423
+ ++HRDL A N+L+
Sbjct: 158 ERRLVHRDLAARNVLV 173
>pdb|3BBT|B Chain B, Crystal Structure Of The Erbb4 Kinase In Complex With
Lapatinib
pdb|3BBT|D Chain D, Crystal Structure Of The Erbb4 Kinase In Complex With
Lapatinib
pdb|3BBW|B Chain B, Crystal Structure Of The Erbb4 Kinase In Its Inactive
Conformation
pdb|3BBW|A Chain A, Crystal Structure Of The Erbb4 Kinase In Its Inactive
Conformation
pdb|3BCE|A Chain A, Crystal Structure Of The Erbb4 Kinase
pdb|3BCE|B Chain B, Crystal Structure Of The Erbb4 Kinase
pdb|3BCE|C Chain C, Crystal Structure Of The Erbb4 Kinase
Length = 328
Score = 78.6 bits (192), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 44/136 (32%), Positives = 73/136 (53%), Gaps = 8/136 (5%)
Query: 294 LKFGSKVASGSYGDLYRGTYCSQD------VAIKVLKPERINSDMQKEFAQEVFIMRKVR 347
LK + SG++G +Y+G + + VAIK+L E EF E IM +
Sbjct: 17 LKRVKVLGSGAFGTVYKGIWVPEGETVKIPVAIKILN-ETTGPKANVEFMDEALIMASMD 75
Query: 348 HKNVVQFIGACTKPPSLCIVTEFMSGGSVYDYLHKLKGVFKLPSLLKVAIDVSKGMNYLH 407
H ++V+ +G C P ++ +VT+ M G + +Y+H+ K LL + ++KGM YL
Sbjct: 76 HPHLVRLLGVCLSP-TIQLVTQLMPHGCLLEYVHEHKDNIGSQLLLNWCVQIAKGMMYLE 134
Query: 408 QNNIIHRDLKAANLLM 423
+ ++HRDL A N+L+
Sbjct: 135 ERRLVHRDLAARNVLV 150
>pdb|3EYG|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
pdb|3EYH|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
Length = 290
Score = 78.6 bits (192), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 52/156 (33%), Positives = 86/156 (55%), Gaps = 15/156 (9%)
Query: 289 IDPKH-----LKFGSKVASGSYG--DLYR----GTYCSQDVAIKVLKPERINSDMQKEFA 337
+DP H LK + G +G +L R G + VA+K LKPE + + +
Sbjct: 1 VDPTHFEKRFLKRIRDLGEGHFGKVELCRYDPEGDNTGEQVAVKSLKPESGGNHIA-DLK 59
Query: 338 QEVFIMRKVRHKNVVQFIGACTKPPS--LCIVTEFMSGGSVYDYLHKLKGVFKLPSLLKV 395
+E+ I+R + H+N+V++ G CT+ + ++ EF+ GS+ +YL K K L LK
Sbjct: 60 KEIEILRNLYHENIVKYKGICTEDGGNGIKLIMEFLPSGSLKEYLPKNKNKINLKQQLKY 119
Query: 396 AIDVSKGMNYLHQNNIIHRDLKAANLLMD-ENEVSL 430
A+ + KGM+YL +HRDL A N+L++ E++V +
Sbjct: 120 AVQICKGMDYLGSRQYVHRDLAARNVLVESEHQVKI 155
>pdb|2VWU|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWV|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWW|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWX|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWY|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWZ|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VX0|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VX1|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2X9F|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2XVD|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|4BB4|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
Length = 302
Score = 78.6 bits (192), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 46/146 (31%), Positives = 76/146 (52%), Gaps = 6/146 (4%)
Query: 288 EIDPKHLKFGSKVASGSYGDLYRGTYCSQD-----VAIKVLKPERINSDMQKEFAQEVFI 342
EID ++K + +G +G++ RG + VAIK LK ++EF E I
Sbjct: 12 EIDVSYVKIEEVIGAGEFGEVCRGRLKAPGKKESCVAIKTLKGG-YTERQRREFLSEASI 70
Query: 343 MRKVRHKNVVQFIGACTKPPSLCIVTEFMSGGSVYDYLHKLKGVFKLPSLLKVAIDVSKG 402
M + H N+++ G T + I+TEFM G++ +L G F + L+ + ++ G
Sbjct: 71 MGQFEHPNIIRLEGVVTNSMPVMILTEFMENGALDSFLRLNDGQFTVIQLVGMLRGIASG 130
Query: 403 MNYLHQNNIIHRDLKAANLLMDENEV 428
M YL + + +HRDL A N+L++ N V
Sbjct: 131 MRYLAEMSYVHRDLAARNILVNSNLV 156
>pdb|4AW5|A Chain A, Complex Of The Ephb4 Kinase Domain With An Oxindole
Inhibitor
Length = 291
Score = 78.2 bits (191), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 46/146 (31%), Positives = 76/146 (52%), Gaps = 6/146 (4%)
Query: 288 EIDPKHLKFGSKVASGSYGDLYRGTYCSQD-----VAIKVLKPERINSDMQKEFAQEVFI 342
EID ++K + +G +G++ RG + VAIK LK ++EF E I
Sbjct: 10 EIDVSYVKIEEVIGAGEFGEVCRGRLKAPGKKESCVAIKTLKGG-YTERQRREFLSEASI 68
Query: 343 MRKVRHKNVVQFIGACTKPPSLCIVTEFMSGGSVYDYLHKLKGVFKLPSLLKVAIDVSKG 402
M + H N+++ G T + I+TEFM G++ +L G F + L+ + ++ G
Sbjct: 69 MGQFEHPNIIRLEGVVTNSMPVMILTEFMENGALDSFLRLNDGQFTVIQLVGMLRGIASG 128
Query: 403 MNYLHQNNIIHRDLKAANLLMDENEV 428
M YL + + +HRDL A N+L++ N V
Sbjct: 129 MRYLAEMSYVHRDLAARNILVNSNLV 154
>pdb|3KMW|A Chain A, Crystal Structure Of The IlkALPHA-Parvin Core Complex
(Mgatp)
pdb|3REP|A Chain A, Crystal Structure Of The IlkALPHA-Parvin Core Complex
(Mnatp)
Length = 271
Score = 78.2 bits (191), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 49/177 (27%), Positives = 91/177 (51%), Gaps = 8/177 (4%)
Query: 289 IDPKHLKFGSKVASGSYGDLYRGTYCSQDVAIKVLKPERINSDMQKEFAQEVFIMRKVRH 348
ID K L F +K+ G+L++G + D+ +KVLK ++ ++F +E +R H
Sbjct: 7 IDFKQLNFLTKLNENHSGELWKGRWQGNDIVVKVLKVRDWSTRKSRDFNEECPRLRIFSH 66
Query: 349 KNVVQFIGACTKPPS--LCIVTEFMSGGSVYDYLHK-LKGVFKLPSLLKVAIDVSKGMNY 405
NV+ +GAC PP+ ++T +M GS+Y+ LH+ V +K A+D+++GM +
Sbjct: 67 PNVLPVLGACQSPPAPHPTLITHWMPYGSLYNVLHEGTNFVVDQSQAVKFALDMARGMAF 126
Query: 406 LH--QNNIIHRDLKAANLLMDENEVSLLLSLCLFTVSILFCGKGRELISLFLGNDVL 460
LH + I L + ++++DE+ + + + V F GR ++ + L
Sbjct: 127 LHTLEPLIPRHALNSRSVMIDED---MTARISMADVKFSFQSPGRMYAPAWVAPEAL 180
>pdb|2ETM|A Chain A, Crystal Structure Of Focal Adhesion Kinase Domain
Complexed With 7h-Pyrrolo [2,3-D] Pyrimidine Derivative
pdb|2ETM|B Chain B, Crystal Structure Of Focal Adhesion Kinase Domain
Complexed With 7h-Pyrrolo [2,3-D] Pyrimidine Derivative
pdb|2IJM|A Chain A, Crystal Structure Of Focal Adhesion Kinase Domain With 2
Molecules In The Asymmetric Unit Complexed With Adp And
Atp
pdb|2IJM|B Chain B, Crystal Structure Of Focal Adhesion Kinase Domain With 2
Molecules In The Asymmetric Unit Complexed With Adp And
Atp
Length = 281
Score = 77.4 bits (189), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 47/151 (31%), Positives = 79/151 (52%), Gaps = 9/151 (5%)
Query: 284 TDVWEIDPKHLKFGSKVASGSYGDLYRGTYCSQD-----VAIKVLKPERINSD-MQKEFA 337
T +EI + ++ G + G +GD+++G Y S + VAIK K SD ++++F
Sbjct: 4 TRDYEIQRERIELGRCIGEGQFGDVHQGIYMSPENPALAVAIKTCK--NCTSDSVREKFL 61
Query: 338 QEVFIMRKVRHKNVVQFIGACTKPPSLCIVTEFMSGGSVYDYLHKLKGVFKLPSLLKVAI 397
QE MR+ H ++V+ IG T+ P + I+ E + G + +L K L SL+ A
Sbjct: 62 QEALTMRQFDHPHIVKLIGVITENP-VWIIMELCTLGELRSFLQVRKYSLDLASLILYAY 120
Query: 398 DVSKGMNYLHQNNIIHRDLKAANLLMDENEV 428
+S + YL +HRD+ A N+L+ N+
Sbjct: 121 QLSTALAYLESKRFVHRDIAARNVLVSSNDC 151
>pdb|2J0L|A Chain A, Crystal Structure Of A The Active Conformation Of The
Kinase Domain Of Focal Adhesion Kinase With A
Phosphorylated Activation Loop
Length = 276
Score = 77.4 bits (189), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 46/148 (31%), Positives = 78/148 (52%), Gaps = 9/148 (6%)
Query: 287 WEIDPKHLKFGSKVASGSYGDLYRGTYCSQD-----VAIKVLKPERINSD-MQKEFAQEV 340
+EI + ++ G + G +GD+++G Y S + VAIK K SD ++++F QE
Sbjct: 5 YEIQRERIELGRCIGEGQFGDVHQGIYMSPENPAMAVAIKTCK--NCTSDSVREKFLQEA 62
Query: 341 FIMRKVRHKNVVQFIGACTKPPSLCIVTEFMSGGSVYDYLHKLKGVFKLPSLLKVAIDVS 400
MR+ H ++V+ IG T+ P + I+ E + G + +L K L SL+ A +S
Sbjct: 63 LTMRQFDHPHIVKLIGVITENP-VWIIMELCTLGELRSFLQVRKFSLDLASLILYAYQLS 121
Query: 401 KGMNYLHQNNIIHRDLKAANLLMDENEV 428
+ YL +HRD+ A N+L+ N+
Sbjct: 122 TALAYLESKRFVHRDIAARNVLVSSNDC 149
>pdb|3PXK|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Pyrrolo[2,3- D]thiazole
pdb|3PXK|B Chain B, Focal Adhesion Kinase Catalytic Domain In Complex With
Pyrrolo[2,3- D]thiazole
Length = 282
Score = 77.4 bits (189), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 47/151 (31%), Positives = 79/151 (52%), Gaps = 9/151 (5%)
Query: 284 TDVWEIDPKHLKFGSKVASGSYGDLYRGTYCSQD-----VAIKVLKPERINSD-MQKEFA 337
T +EI + ++ G + G +GD+++G Y S + VAIK K SD ++++F
Sbjct: 5 TRDYEIQRERIELGRCIGEGQFGDVHQGIYMSPENPALAVAIKTCK--NCTSDSVREKFL 62
Query: 338 QEVFIMRKVRHKNVVQFIGACTKPPSLCIVTEFMSGGSVYDYLHKLKGVFKLPSLLKVAI 397
QE MR+ H ++V+ IG T+ P + I+ E + G + +L K L SL+ A
Sbjct: 63 QEALTMRQFDHPHIVKLIGVITENP-VWIIMELCTLGELRSFLQVRKYSLDLASLILYAY 121
Query: 398 DVSKGMNYLHQNNIIHRDLKAANLLMDENEV 428
+S + YL +HRD+ A N+L+ N+
Sbjct: 122 QLSTALAYLESKRFVHRDIAARNVLVSSNDC 152
>pdb|3BZ3|A Chain A, Crystal Structure Analysis Of Focal Adhesion Kinase With A
Methanesulfonamide Diaminopyrimidine Inhibitor
Length = 276
Score = 77.4 bits (189), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 46/148 (31%), Positives = 78/148 (52%), Gaps = 9/148 (6%)
Query: 287 WEIDPKHLKFGSKVASGSYGDLYRGTYCSQD-----VAIKVLKPERINSD-MQKEFAQEV 340
+EI + ++ G + G +GD+++G Y S + VAIK K SD ++++F QE
Sbjct: 2 YEIQRERIELGRCIGEGQFGDVHQGIYMSPENPALAVAIKTCK--NCTSDSVREKFLQEA 59
Query: 341 FIMRKVRHKNVVQFIGACTKPPSLCIVTEFMSGGSVYDYLHKLKGVFKLPSLLKVAIDVS 400
MR+ H ++V+ IG T+ P + I+ E + G + +L K L SL+ A +S
Sbjct: 60 LTMRQFDHPHIVKLIGVITENP-VWIIMELCTLGELRSFLQVRKYSLDLASLILYAYQLS 118
Query: 401 KGMNYLHQNNIIHRDLKAANLLMDENEV 428
+ YL +HRD+ A N+L+ N+
Sbjct: 119 TALAYLESKRFVHRDIAARNVLVSSNDC 146
>pdb|2JKM|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 77.4 bits (189), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 46/148 (31%), Positives = 78/148 (52%), Gaps = 9/148 (6%)
Query: 287 WEIDPKHLKFGSKVASGSYGDLYRGTYCSQD-----VAIKVLKPERINSD-MQKEFAQEV 340
+EI + ++ G + G +GD+++G Y S + VAIK K SD ++++F QE
Sbjct: 5 YEIQRERIELGRCIGEGQFGDVHQGIYMSPENPAMAVAIKTCK--NCTSDSVREKFLQEA 62
Query: 341 FIMRKVRHKNVVQFIGACTKPPSLCIVTEFMSGGSVYDYLHKLKGVFKLPSLLKVAIDVS 400
MR+ H ++V+ IG T+ P + I+ E + G + +L K L SL+ A +S
Sbjct: 63 LTMRQFDHPHIVKLIGVITENP-VWIIMELCTLGELRSFLQVRKYSLDLASLILYAYQLS 121
Query: 401 KGMNYLHQNNIIHRDLKAANLLMDENEV 428
+ YL +HRD+ A N+L+ N+
Sbjct: 122 TALAYLESKRFVHRDIAARNVLVSSNDC 149
>pdb|2J0M|B Chain B, Crystal Structure A Two-Chain Complex Between The Ferm And
Kinase Domains Of Focal Adhesion Kinase.
pdb|2JKQ|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 77.4 bits (189), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 46/148 (31%), Positives = 78/148 (52%), Gaps = 9/148 (6%)
Query: 287 WEIDPKHLKFGSKVASGSYGDLYRGTYCSQD-----VAIKVLKPERINSD-MQKEFAQEV 340
+EI + ++ G + G +GD+++G Y S + VAIK K SD ++++F QE
Sbjct: 5 YEIQRERIELGRCIGEGQFGDVHQGIYMSPENPALAVAIKTCK--NCTSDSVREKFLQEA 62
Query: 341 FIMRKVRHKNVVQFIGACTKPPSLCIVTEFMSGGSVYDYLHKLKGVFKLPSLLKVAIDVS 400
MR+ H ++V+ IG T+ P + I+ E + G + +L K L SL+ A +S
Sbjct: 63 LTMRQFDHPHIVKLIGVITENP-VWIIMELCTLGELRSFLQVRKYSLDLASLILYAYQLS 121
Query: 401 KGMNYLHQNNIIHRDLKAANLLMDENEV 428
+ YL +HRD+ A N+L+ N+
Sbjct: 122 TALAYLESKRFVHRDIAARNVLVSSNDC 149
>pdb|4EBW|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With Novel Allosteric Inhibitor
pdb|4EBV|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With Novel Allosteric Inhibitor
Length = 304
Score = 77.4 bits (189), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 46/148 (31%), Positives = 78/148 (52%), Gaps = 9/148 (6%)
Query: 287 WEIDPKHLKFGSKVASGSYGDLYRGTYCSQD-----VAIKVLKPERINSD-MQKEFAQEV 340
+EI + ++ G + G +GD+++G Y S + VAIK K SD ++++F QE
Sbjct: 33 YEIQRERIELGRCIGEGQFGDVHQGIYMSPENPALAVAIKTCK--NCTSDSVREKFLQEA 90
Query: 341 FIMRKVRHKNVVQFIGACTKPPSLCIVTEFMSGGSVYDYLHKLKGVFKLPSLLKVAIDVS 400
MR+ H ++V+ IG T+ P + I+ E + G + +L K L SL+ A +S
Sbjct: 91 LTMRQFDHPHIVKLIGVITENP-VWIIMELCTLGELRSFLQVRKYSLDLASLILYAYQLS 149
Query: 401 KGMNYLHQNNIIHRDLKAANLLMDENEV 428
+ YL +HRD+ A N+L+ N+
Sbjct: 150 TALAYLESKRFVHRDIAARNVLVSSNDC 177
>pdb|1MP8|A Chain A, Crystal Structure Of Focal Adhesion Kinase (Fak)
pdb|4I4F|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With An Allosteric Binding Pyrazolobenzothiazine
Compound
Length = 281
Score = 77.4 bits (189), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 46/148 (31%), Positives = 78/148 (52%), Gaps = 9/148 (6%)
Query: 287 WEIDPKHLKFGSKVASGSYGDLYRGTYCSQD-----VAIKVLKPERINSD-MQKEFAQEV 340
+EI + ++ G + G +GD+++G Y S + VAIK K SD ++++F QE
Sbjct: 10 YEIQRERIELGRCIGEGQFGDVHQGIYMSPENPALAVAIKTCK--NCTSDSVREKFLQEA 67
Query: 341 FIMRKVRHKNVVQFIGACTKPPSLCIVTEFMSGGSVYDYLHKLKGVFKLPSLLKVAIDVS 400
MR+ H ++V+ IG T+ P + I+ E + G + +L K L SL+ A +S
Sbjct: 68 LTMRQFDHPHIVKLIGVITENP-VWIIMELCTLGELRSFLQVRKYSLDLASLILYAYQLS 126
Query: 401 KGMNYLHQNNIIHRDLKAANLLMDENEV 428
+ YL +HRD+ A N+L+ N+
Sbjct: 127 TALAYLESKRFVHRDIAARNVLVSSNDC 154
>pdb|2J0K|A Chain A, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains.
pdb|2J0K|B Chain B, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains
Length = 656
Score = 77.4 bits (189), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 55/219 (25%), Positives = 105/219 (47%), Gaps = 27/219 (12%)
Query: 225 VVDGWPYEETEQLRAALEKEVLKLERQGWPSHRSSSPTSEPEDTGMKSHPYHLKIPNDGT 284
++DG+ + A + +++ +++G + S + E G++SH + +D
Sbjct: 313 LIDGY----CRLVNGATQSFIIRPQKEGERALPSIPKLANNEKQGVRSHTVSVSETDDYA 368
Query: 285 DV--------------WEIDPKHLKFGSKVASGSYGDLYRGTYCSQD-----VAIKVLKP 325
++ +EI + ++ G + G +GD+++G Y S + VAIK K
Sbjct: 369 EIIDEEDTYTMPSTRDYEIQRERIELGRCIGEGQFGDVHQGIYMSPENPAMAVAIKTCK- 427
Query: 326 ERINSD-MQKEFAQEVFIMRKVRHKNVVQFIGACTKPPSLCIVTEFMSGGSVYDYLHKLK 384
SD ++++F QE MR+ H ++V+ IG T+ P + I+ E + G + +L K
Sbjct: 428 -NCTSDSVREKFLQEALTMRQFDHPHIVKLIGVITENP-VWIIMELCTLGELRSFLQVRK 485
Query: 385 GVFKLPSLLKVAIDVSKGMNYLHQNNIIHRDLKAANLLM 423
L SL+ A +S + YL +HRD+ A N+L+
Sbjct: 486 FSLDLASLILYAYQLSTALAYLESKRFVHRDIAARNVLV 524
>pdb|2P2H|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridinyl-Triazine Inhibitor
pdb|2QU5|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzimidazole Inhibitor
pdb|2QU6|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzoxazole Inhibitor
pdb|2QU6|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzoxazole Inhibitor
pdb|3B8Q|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8Q|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8R|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8R|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|2RL5|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A 2,3-Dihydro-1,4-Benzoxazine Inhibitor
pdb|3BE2|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzamide Inhibitor
pdb|3CP9|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CP9|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CPB|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Bisamide Inhibitor
pdb|3CPB|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Bisamide Inhibitor
pdb|3CPC|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CPC|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3DTW|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzisoxazole Inhibitor
pdb|3DTW|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzisoxazole Inhibitor
Length = 314
Score = 77.0 bits (188), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 53/186 (28%), Positives = 86/186 (46%), Gaps = 27/186 (14%)
Query: 278 KIPNDGTDVWEIDPKHLKFGSKVASGSYGDLYRG-------TYCSQDVAIKVLKPERINS 330
++P D + WE LK G + G++G + T + VA+K+LK +S
Sbjct: 5 RLPYDASK-WEFPRDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHS 63
Query: 331 DMQKEFAQEVFIMRKVRHKNVVQFIGACTKPPS-LCIVTEFMSGGSVYDYLHKLKGVF-- 387
+ + ++ ++ H NVV +GACTKP L ++TEF G++ YL + F
Sbjct: 64 EHRALMSELKILIHIGHHLNVVNLLGACTKPGGPLMVITEFCKFGNLSTYLRSKRNEFVP 123
Query: 388 -------------KLPSLLKVAIDVSKGMNYLHQNNIIHRDLKAANLLMDENEVSLLLSL 434
L L+ + V+KGM +L IHRDL A N+L+ E V + +
Sbjct: 124 YKVAPEDLYKDFLTLEHLICYSFQVAKGMEFLASRKCIHRDLAARNILLSEKNV---VKI 180
Query: 435 CLFTVS 440
C F ++
Sbjct: 181 CDFGLA 186
>pdb|3EWH|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridyl-Pyrimidine Benzimidazole Inhibitor
Length = 314
Score = 77.0 bits (188), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 53/186 (28%), Positives = 86/186 (46%), Gaps = 27/186 (14%)
Query: 278 KIPNDGTDVWEIDPKHLKFGSKVASGSYGDLYRG-------TYCSQDVAIKVLKPERINS 330
++P D + WE LK G + G++G + T + VA+K+LK +S
Sbjct: 5 RLPYDASK-WEFPRDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHS 63
Query: 331 DMQKEFAQEVFIMRKVRHKNVVQFIGACTKPPS-LCIVTEFMSGGSVYDYLHKLKGVF-- 387
+ + ++ ++ H NVV +GACTKP L ++TEF G++ YL + F
Sbjct: 64 EHRALMSELKILIHIGHHLNVVNLLGACTKPGGPLMVITEFCKFGNLSTYLRSKRNEFVP 123
Query: 388 -------------KLPSLLKVAIDVSKGMNYLHQNNIIHRDLKAANLLMDENEVSLLLSL 434
L L+ + V+KGM +L IHRDL A N+L+ E V + +
Sbjct: 124 YKVAPEDLYKDFLTLEHLICYSFQVAKGMEFLASRKCIHRDLAARNILLSEKNV---VKI 180
Query: 435 CLFTVS 440
C F ++
Sbjct: 181 CDFGLA 186
>pdb|3U6J|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyrazolone Inhibitor
Length = 314
Score = 77.0 bits (188), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 53/186 (28%), Positives = 86/186 (46%), Gaps = 27/186 (14%)
Query: 278 KIPNDGTDVWEIDPKHLKFGSKVASGSYGDLYRG-------TYCSQDVAIKVLKPERINS 330
++P D + WE LK G + G++G + T + VA+K+LK +S
Sbjct: 5 RLPYDASK-WEFPRDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHS 63
Query: 331 DMQKEFAQEVFIMRKVRHKNVVQFIGACTKPPS-LCIVTEFMSGGSVYDYLHKLKGVF-- 387
+ + ++ ++ H NVV +GACTKP L ++TEF G++ YL + F
Sbjct: 64 EHRALMSELKILIHIGHHLNVVNLLGACTKPGGPLMVITEFCKFGNLSTYLRSKRNEFVP 123
Query: 388 -------------KLPSLLKVAIDVSKGMNYLHQNNIIHRDLKAANLLMDENEVSLLLSL 434
L L+ + V+KGM +L IHRDL A N+L+ E V + +
Sbjct: 124 YKVAPEDLYKDFLTLEHLICYSFQVAKGMEFLASRKCIHRDLAARNILLSEKNV---VKI 180
Query: 435 CLFTVS 440
C F ++
Sbjct: 181 CDFGLA 186
>pdb|3UGC|A Chain A, Structural Basis Of Jak2 Inhibition By The Type Ii
Inhibtor Nvp-Bbt594
Length = 295
Score = 76.6 bits (187), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 47/157 (29%), Positives = 83/157 (52%), Gaps = 11/157 (7%)
Query: 283 GTDVWEIDPKHLKFGSKVASGSYGDLYRGTY------CSQDVAIKVLKPERINSDMQKEF 336
G+D + + +HLKF ++ G++G + Y + VA+K L + + ++F
Sbjct: 1 GSDPTQFEERHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKL--QHSTEEHLRDF 58
Query: 337 AQEVFIMRKVRHKNVVQFIGACTKPP--SLCIVTEFMSGGSVYDYLHKLKGVFKLPSLLK 394
+E+ I++ ++H N+V++ G C +L ++ E++ GS+ DYL K K LL+
Sbjct: 59 EREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQ 118
Query: 395 VAIDVSKGMNYLHQNNIIHRDLKAANLLMD-ENEVSL 430
+ KGM YL IHRDL N+L++ EN V +
Sbjct: 119 YTSQICKGMEYLGTKRYIHRDLATRNILVENENRVKI 155
>pdb|3LPB|A Chain A, Crystal Structure Of Jak2 Complexed With A Potent
2,8-Diaryl Quinoxaline Inhibitor
pdb|3LPB|B Chain B, Crystal Structure Of Jak2 Complexed With A Potent
2,8-Diaryl Quinoxaline Inhibitor
pdb|3KRR|A Chain A, Crystal Structure Of Jak2 Complexed With A Potent
Quinoxaline Atp Site Inhibitor
Length = 295
Score = 76.6 bits (187), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 47/157 (29%), Positives = 83/157 (52%), Gaps = 11/157 (7%)
Query: 283 GTDVWEIDPKHLKFGSKVASGSYGDLYRGTY------CSQDVAIKVLKPERINSDMQKEF 336
G+D + + +HLKF ++ G++G + Y + VA+K L + + ++F
Sbjct: 1 GSDPTQFEERHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKL--QHSTEEHLRDF 58
Query: 337 AQEVFIMRKVRHKNVVQFIGACTKPP--SLCIVTEFMSGGSVYDYLHKLKGVFKLPSLLK 394
+E+ I++ ++H N+V++ G C +L ++ E++ GS+ DYL K K LL+
Sbjct: 59 EREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQ 118
Query: 395 VAIDVSKGMNYLHQNNIIHRDLKAANLLMD-ENEVSL 430
+ KGM YL IHRDL N+L++ EN V +
Sbjct: 119 YTSQICKGMEYLGTKRYIHRDLATRNILVENENRVKI 155
>pdb|3C7Q|A Chain A, Structure Of Vegfr2 Kinase Domain In Complex With Bibf1120
Length = 316
Score = 76.3 bits (186), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 52/184 (28%), Positives = 85/184 (46%), Gaps = 25/184 (13%)
Query: 278 KIPNDGTDVWEIDPKHLKFGSKVASGSYGDLYRG-------TYCSQDVAIKVLKPERINS 330
++P D + WE LK G + G++G + T + VA+K+LK +S
Sbjct: 16 RLPYDASK-WEFPRDRLKLGKPLGRGAFGQVIEADAFGIDKTATXRTVAVKMLKEGATHS 74
Query: 331 DMQKEFAQEVFIMRKVRHKNVVQFIGACTKPPS-LCIVTEFMSGGSVYDYLHKLKGVF-- 387
+ + ++ ++ H NVV +GACTKP L ++ EF G++ YL + F
Sbjct: 75 EHRALMSELKILIHIGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVP 134
Query: 388 -----------KLPSLLKVAIDVSKGMNYLHQNNIIHRDLKAANLLMDENEVSLLLSLCL 436
L L+ + V+KGM +L IHRDL A N+L+ E V + +C
Sbjct: 135 YKPEDLYKDFLTLEHLIXYSFQVAKGMEFLASRKXIHRDLAARNILLSEKNV---VKICD 191
Query: 437 FTVS 440
F ++
Sbjct: 192 FGLA 195
>pdb|2PSQ|A Chain A, Crystal Structure Of Unphosphorylated Unactivated Wild
Type Fgf Receptor 2 (Fgfr2) Kinase Domain
pdb|2PSQ|B Chain B, Crystal Structure Of Unphosphorylated Unactivated Wild
Type Fgf Receptor 2 (Fgfr2) Kinase Domain
Length = 370
Score = 76.3 bits (186), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 53/200 (26%), Positives = 91/200 (45%), Gaps = 28/200 (14%)
Query: 254 PSHRSSSPTSEPEDTGMKSHPYHLKIPNDGTDVWEIDPKHLKFGSKVASGSYGDLYRGTY 313
P R ++ S DT M + ++P D WE L G + G +G +
Sbjct: 45 PLVRITTRLSSTADTPMLAGVSEYELPEDPK--WEFPRDKLTLGKPLGEGCFGQVVMAEA 102
Query: 314 CSQD---------VAIKVLKPERINSDMQKEFAQEVFIMRKV-RHKNVVQFIGACTKPPS 363
D VA+K+LK + D+ + E+ +M+ + +HKN++ +GACT+
Sbjct: 103 VGIDKDKPKEAVTVAVKMLKDDATEKDLS-DLVSEMEMMKMIGKHKNIINLLGACTQDGP 161
Query: 364 LCIVTEFMSGGSVYDYLHKLK--------GVFKLPS-------LLKVAIDVSKGMNYLHQ 408
L ++ E+ S G++ +YL + + ++P L+ +++GM YL
Sbjct: 162 LYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLAS 221
Query: 409 NNIIHRDLKAANLLMDENEV 428
IHRDL A N+L+ EN V
Sbjct: 222 QKCIHRDLAARNVLVTENNV 241
>pdb|1MQB|A Chain A, Crystal Structure Of Ephrin A2 (Epha2) Receptor Protein
Kinase
pdb|1MQB|B Chain B, Crystal Structure Of Ephrin A2 (Epha2) Receptor Protein
Kinase
Length = 333
Score = 75.9 bits (185), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 44/147 (29%), Positives = 75/147 (51%), Gaps = 7/147 (4%)
Query: 288 EIDPKHLKFGSKVASGSYGDLYRGTYCSQD------VAIKVLKPERINSDMQKEFAQEVF 341
EI P + + +G +G++Y+G + VAIK LK + +F E
Sbjct: 40 EIHPSCVTRQKVIGAGEFGEVYKGMLKTSSGKKEVPVAIKTLKAG-YTEKQRVDFLGEAG 98
Query: 342 IMRKVRHKNVVQFIGACTKPPSLCIVTEFMSGGSVYDYLHKLKGVFKLPSLLKVAIDVSK 401
IM + H N+++ G +K + I+TE+M G++ +L + G F + L+ + ++
Sbjct: 99 IMGQFSHHNIIRLEGVISKYKPMMIITEYMENGALDKFLREKDGEFSVLQLVGMLRGIAA 158
Query: 402 GMNYLHQNNIIHRDLKAANLLMDENEV 428
GM YL N +HRDL A N+L++ N V
Sbjct: 159 GMKYLANMNYVHRDLAARNILVNSNLV 185
>pdb|3JY9|A Chain A, Janus Kinase 2 Inhibitors
Length = 311
Score = 75.5 bits (184), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 46/161 (28%), Positives = 84/161 (52%), Gaps = 11/161 (6%)
Query: 279 IPNDGTDVWEIDPKHLKFGSKVASGSYGDLYRGTY------CSQDVAIKVLKPERINSDM 332
+P ++ + + +HLKF ++ G++G + Y + VA+K L + +
Sbjct: 15 VPRGSHNMTQFEERHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKL--QHSTEEH 72
Query: 333 QKEFAQEVFIMRKVRHKNVVQFIGACTKPP--SLCIVTEFMSGGSVYDYLHKLKGVFKLP 390
++F +E+ I++ ++H N+V++ G C +L ++ E++ GS+ DYL K K
Sbjct: 73 LRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHI 132
Query: 391 SLLKVAIDVSKGMNYLHQNNIIHRDLKAANLLMD-ENEVSL 430
LL+ + KGM YL IHRDL N+L++ EN V +
Sbjct: 133 KLLQYTSQICKGMEYLGTKRYIHRDLATRNILVENENRVKI 173
>pdb|3IO7|A Chain A, 2-Aminopyrazolo[1,5-A]pyrimidines As Potent And Selective
Inhibitors Of Jak2
pdb|3IOK|A Chain A, 2-Aminopyrazolo[1,5-A]pyrimidines As Potent And Selective
Inhibitors Of Jak2
pdb|3KCK|A Chain A, A Novel Chemotype Of Kinase Inhibitors
Length = 313
Score = 75.5 bits (184), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 46/161 (28%), Positives = 84/161 (52%), Gaps = 11/161 (6%)
Query: 279 IPNDGTDVWEIDPKHLKFGSKVASGSYGDLYRGTY------CSQDVAIKVLKPERINSDM 332
+P ++ + + +HLKF ++ G++G + Y + VA+K L + +
Sbjct: 15 VPRGSHNMTQFEERHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKL--QHSTEEH 72
Query: 333 QKEFAQEVFIMRKVRHKNVVQFIGACTKPP--SLCIVTEFMSGGSVYDYLHKLKGVFKLP 390
++F +E+ I++ ++H N+V++ G C +L ++ E++ GS+ DYL K K
Sbjct: 73 LRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHI 132
Query: 391 SLLKVAIDVSKGMNYLHQNNIIHRDLKAANLLMD-ENEVSL 430
LL+ + KGM YL IHRDL N+L++ EN V +
Sbjct: 133 KLLQYTSQICKGMEYLGTKRYIHRDLATRNILVENENRVKI 173
>pdb|2P2I|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Nicotinamide Inhibitor
pdb|2P2I|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Nicotinamide Inhibitor
pdb|3EFL|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Motesanib
pdb|3EFL|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Motesanib
Length = 314
Score = 75.5 bits (184), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 52/186 (27%), Positives = 85/186 (45%), Gaps = 27/186 (14%)
Query: 278 KIPNDGTDVWEIDPKHLKFGSKVASGSYGDLYRG-------TYCSQDVAIKVLKPERINS 330
++P D + WE LK G + G++G + T + VA+K+LK +S
Sbjct: 5 RLPYDASK-WEFPRDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHS 63
Query: 331 DMQKEFAQEVFIMRKVRHKNVVQFIGACTKPPS-LCIVTEFMSGGSVYDYLHKLKGVF-- 387
+ + ++ ++ H NVV +GACTKP L ++ EF G++ YL + F
Sbjct: 64 EHRALMSELKILIHIGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVP 123
Query: 388 -------------KLPSLLKVAIDVSKGMNYLHQNNIIHRDLKAANLLMDENEVSLLLSL 434
L L+ + V+KGM +L IHRDL A N+L+ E V + +
Sbjct: 124 YKVAPEDLYKDFLTLEHLICYSFQVAKGMEFLASRKCIHRDLAARNILLSEKNV---VKI 180
Query: 435 CLFTVS 440
C F ++
Sbjct: 181 CDFGLA 186
>pdb|2HEL|A Chain A, Crystal Structure Of A Mutant Epha4 Kinase Domain (Y742a)
Length = 306
Score = 75.5 bits (184), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 50/165 (30%), Positives = 79/165 (47%), Gaps = 14/165 (8%)
Query: 274 PYHLKIPNDGTDVW--EIDPKHLKFGSKVASGSYGDLYRGTY--------CSQDVAIKVL 323
P+ + PN + EID +K + G +G++ G C VAIK L
Sbjct: 9 PFTFEDPNQAVREFAKEIDASCIKIEKVIGVGEFGEVCSGRLKVPGKREIC---VAIKTL 65
Query: 324 KPERINSDMQKEFAQEVFIMRKVRHKNVVQFIGACTKPPSLCIVTEFMSGGSVYDYLHKL 383
K + +++F E IM + H N++ G TK + I+TE+M GS+ +L K
Sbjct: 66 KAGYTDKQ-RRDFLSEASIMGQFDHPNIIHLEGVVTKCKPVMIITEYMENGSLDAFLRKN 124
Query: 384 KGVFKLPSLLKVAIDVSKGMNYLHQNNIIHRDLKAANLLMDENEV 428
G F + L+ + + GM YL + +HRDL A N+L++ N V
Sbjct: 125 DGRFTVIQLVGMLRGIGSGMKYLSDMSAVHRDLAARNILVNSNLV 169
>pdb|2JKK|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
pdb|2JKO|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 75.1 bits (183), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 45/148 (30%), Positives = 77/148 (52%), Gaps = 9/148 (6%)
Query: 287 WEIDPKHLKFGSKVASGSYGDLYRGTYCSQD-----VAIKVLKPERINSD-MQKEFAQEV 340
+EI + ++ G + G +GD+++G Y S + VAIK K SD ++++F QE
Sbjct: 5 YEIQRERIELGRCIGEGQFGDVHQGIYMSPENPAMAVAIKTCK--NCTSDSVREKFLQEA 62
Query: 341 FIMRKVRHKNVVQFIGACTKPPSLCIVTEFMSGGSVYDYLHKLKGVFKLPSLLKVAIDVS 400
MR+ H ++V+ IG T+ P + I+ E + G + +L K L SL+ A +S
Sbjct: 63 LTMRQFDHPHIVKLIGVITENP-VWIIMELCTLGELRSFLQVRKFSLDLASLILYAYQLS 121
Query: 401 KGMNYLHQNNIIHRDLKAANLLMDENEV 428
+ YL +HRD+ A N+L+ +
Sbjct: 122 TALAYLESKRFVHRDIAARNVLVSATDC 149
>pdb|1YWN|A Chain A, Vegfr2 In Complex With A Novel
4-amino-furo[2,3-d]pyrimidine
Length = 316
Score = 75.1 bits (183), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 52/186 (27%), Positives = 85/186 (45%), Gaps = 27/186 (14%)
Query: 278 KIPNDGTDVWEIDPKHLKFGSKVASGSYGDLYRG-------TYCSQDVAIKVLKPERINS 330
++P D + WE LK G + G++G + T + VA+K+LK +S
Sbjct: 14 RLPYDASK-WEFPRDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHS 72
Query: 331 DMQKEFAQEVFIMRKVRHKNVVQFIGACTKPPS-LCIVTEFMSGGSVYDYLHKLKGVF-- 387
+ + ++ ++ H NVV +GACTKP L ++ EF G++ YL + F
Sbjct: 73 EHRALMSELKILIHIGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVP 132
Query: 388 -------------KLPSLLKVAIDVSKGMNYLHQNNIIHRDLKAANLLMDENEVSLLLSL 434
L L+ + V+KGM +L IHRDL A N+L+ E V + +
Sbjct: 133 YKVAPEDLYKDFLTLEHLICYSFQVAKGMEFLASRKCIHRDLAARNILLSEKNV---VKI 189
Query: 435 CLFTVS 440
C F ++
Sbjct: 190 CDFGLA 195
>pdb|1VR2|A Chain A, Human Vascular Endothelial Growth Factor Receptor 2 (Kdr)
Kinase Domain
Length = 316
Score = 75.1 bits (183), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 52/186 (27%), Positives = 85/186 (45%), Gaps = 27/186 (14%)
Query: 278 KIPNDGTDVWEIDPKHLKFGSKVASGSYGDLYRG-------TYCSQDVAIKVLKPERINS 330
++P D + WE LK G + G++G + T + VA+K+LK +S
Sbjct: 14 RLPYDASK-WEFPRDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHS 72
Query: 331 DMQKEFAQEVFIMRKVRHKNVVQFIGACTKPPS-LCIVTEFMSGGSVYDYLHKLKGVF-- 387
+ + ++ ++ H NVV +GACTKP L ++ EF G++ YL + F
Sbjct: 73 EHRALMSELKILIHIGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVP 132
Query: 388 -------------KLPSLLKVAIDVSKGMNYLHQNNIIHRDLKAANLLMDENEVSLLLSL 434
L L+ + V+KGM +L IHRDL A N+L+ E V + +
Sbjct: 133 YKVAPEDLYKDFLTLEHLICYSFQVAKGMEFLASRKCIHRDLAARNILLSEKNV---VKI 189
Query: 435 CLFTVS 440
C F ++
Sbjct: 190 CDFGLA 195
>pdb|3VNT|A Chain A, Crystal Structure Of The Kinase Domain Of Human Vegfr2
With A [1, 3]thiazolo[5,4-B]pyridine Derivative
Length = 318
Score = 75.1 bits (183), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 52/186 (27%), Positives = 85/186 (45%), Gaps = 27/186 (14%)
Query: 278 KIPNDGTDVWEIDPKHLKFGSKVASGSYGDLYRG-------TYCSQDVAIKVLKPERINS 330
++P D + WE LK G + G++G + T + VA+K+LK +S
Sbjct: 16 RLPYDASK-WEFPRDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHS 74
Query: 331 DMQKEFAQEVFIMRKVRHKNVVQFIGACTKPPS-LCIVTEFMSGGSVYDYLHKLKGVF-- 387
+ + ++ ++ H NVV +GACTKP L ++ EF G++ YL + F
Sbjct: 75 EHRALMSELKILIHIGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVP 134
Query: 388 -------------KLPSLLKVAIDVSKGMNYLHQNNIIHRDLKAANLLMDENEVSLLLSL 434
L L+ + V+KGM +L IHRDL A N+L+ E V + +
Sbjct: 135 YKEAPEDLYKDFLTLEHLICYSFQVAKGMEFLASRKCIHRDLAARNILLSEKNV---VKI 191
Query: 435 CLFTVS 440
C F ++
Sbjct: 192 CDFGLA 197
>pdb|4AGC|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Axitinib (Ag-013736)
(N-Methyl-2-(
3-((E)-2-Pyridin-2-Yl-Vinyl)-1h-Indazol-6-Ylsulfanyl)-
Benzamide)
pdb|4AGD|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Sunitinib (Su11248) (N-2-
Diethylaminoethyl)-5-((Z)-(5-Fluoro-2-Oxo-1h-Indol-3-
Ylidene)methyl)-2,4-Dimethyl-1h-Pyrrole-3-Carboxamide)
pdb|4ASD|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Sorafenib (Bay 43-9006)
pdb|4ASE|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Tivozanib (Av-951)
Length = 353
Score = 74.7 bits (182), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 52/186 (27%), Positives = 85/186 (45%), Gaps = 27/186 (14%)
Query: 278 KIPNDGTDVWEIDPKHLKFGSKVASGSYGDLYRG-------TYCSQDVAIKVLKPERINS 330
++P D + WE LK G + G++G + T + VA+K+LK +S
Sbjct: 51 RLPYDASK-WEFPRDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHS 109
Query: 331 DMQKEFAQEVFIMRKVRHKNVVQFIGACTKPPS-LCIVTEFMSGGSVYDYLHKLKGVF-- 387
+ + ++ ++ H NVV +GACTKP L ++ EF G++ YL + F
Sbjct: 110 EHRALMSELKILIHIGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVP 169
Query: 388 -------------KLPSLLKVAIDVSKGMNYLHQNNIIHRDLKAANLLMDENEVSLLLSL 434
L L+ + V+KGM +L IHRDL A N+L+ E V + +
Sbjct: 170 YKVAPEDLYKDFLTLEHLICYSFQVAKGMEFLASRKCIHRDLAARNILLSEKNV---VKI 226
Query: 435 CLFTVS 440
C F ++
Sbjct: 227 CDFGLA 232
>pdb|2XIR|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Pf-00337210 (N,2-Dimethyl-6-(7-(2-Morpholinoethoxy)
Quinolin-4-Yloxy)benzofuran-3-Carboxamide)
pdb|4AG8|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Axitinib (Ag-013736)
(N-Methyl-2-(3-((E)-2-Pyridin-2-
Yl-Vinyl)-1h-Indazol-6-Ylsulfanyl)-Benzamide)
Length = 316
Score = 74.7 bits (182), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 52/186 (27%), Positives = 85/186 (45%), Gaps = 27/186 (14%)
Query: 278 KIPNDGTDVWEIDPKHLKFGSKVASGSYGDLYRG-------TYCSQDVAIKVLKPERINS 330
++P D + WE LK G + G++G + T + VA+K+LK +S
Sbjct: 14 RLPYDASK-WEFPRDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHS 72
Query: 331 DMQKEFAQEVFIMRKVRHKNVVQFIGACTKPPS-LCIVTEFMSGGSVYDYLHKLKGVF-- 387
+ + ++ ++ H NVV +GACTKP L ++ EF G++ YL + F
Sbjct: 73 EHRALMSELKILIHIGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVP 132
Query: 388 -------------KLPSLLKVAIDVSKGMNYLHQNNIIHRDLKAANLLMDENEVSLLLSL 434
L L+ + V+KGM +L IHRDL A N+L+ E V + +
Sbjct: 133 YKVAPEDLYKDFLTLEHLICYSFQVAKGMEFLASRKCIHRDLAARNILLSEKNV---VKI 189
Query: 435 CLFTVS 440
C F ++
Sbjct: 190 CDFGLA 195
>pdb|2QOO|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:y742f Triple Mutant
Length = 373
Score = 74.7 bits (182), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 45/146 (30%), Positives = 73/146 (50%), Gaps = 6/146 (4%)
Query: 288 EIDPKHLKFGSKVASGSYGDLYRG-----TYCSQDVAIKVLKPERINSDMQKEFAQEVFI 342
E+D ++ V +G +G++ G + VAIK LK +++F E I
Sbjct: 41 ELDATNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVG-YTEKQRRDFLGEASI 99
Query: 343 MRKVRHKNVVQFIGACTKPPSLCIVTEFMSGGSVYDYLHKLKGVFKLPSLLKVAIDVSKG 402
M + H N+++ G TK + IVTE+M GS+ +L K F + L+ + ++ G
Sbjct: 100 MGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVIQLVGMLRGIASG 159
Query: 403 MNYLHQNNIIHRDLKAANLLMDENEV 428
M YL +HRDL A N+L++ N V
Sbjct: 160 MKYLSDMGFVHRDLAARNILINSNLV 185
>pdb|2OO8|X Chain X, Synthesis, Structural Analysis, And Sar Studies Of
Triazine Derivatives As Potent, Selective Tie-2
Inhibitors
pdb|2OSC|A Chain A, Synthesis, Structural Analysis, And Sar Studies Of
Triazine Derivatives As Potent, Selective Tie-2
Inhibitors
pdb|2P4I|A Chain A, Evolution Of A Highly Selective And Potent
2-(Pyridin-2-Yl)- 1,3,5-Triazine Tie-2 Kinase Inhibitor
pdb|2P4I|B Chain B, Evolution Of A Highly Selective And Potent
2-(Pyridin-2-Yl)- 1,3,5-Triazine Tie-2 Kinase Inhibitor
pdb|3L8P|A Chain A, Crystal Structure Of Cytoplasmic Kinase Domain Of Tie2
Complexed With Inhibitor Cep11207
Length = 317
Score = 74.7 bits (182), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 49/161 (30%), Positives = 81/161 (50%), Gaps = 21/161 (13%)
Query: 289 IDPKHLKFGSKVASGSYGDLYRGTY----CSQDVAIKVLKPERINSDMQKEFAQEVFIMR 344
+D +KF + G++G + + D AIK +K E + D ++FA E+ ++
Sbjct: 12 LDWNDIKFQDVIGEGNFGQVLKARIKKDGLRMDAAIKRMK-EYASKDDHRDFAGELEVLC 70
Query: 345 KV-RHKNVVQFIGACTKPPSLCIVTEFMSGGSVYDYLHKLKGVFKLPS------------ 391
K+ H N++ +GAC L + E+ G++ D+L K + + P+
Sbjct: 71 KLGHHPNIINLLGACEHRGYLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLS 130
Query: 392 ---LLKVAIDVSKGMNYLHQNNIIHRDLKAANLLMDENEVS 429
LL A DV++GM+YL Q IHRDL A N+L+ EN V+
Sbjct: 131 SQQLLHFAADVARGMDYLSQKQFIHRDLAARNILVGENYVA 171
>pdb|3CJF|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
3,4,5-Trimethoxy Aniline Containing Pyrimidine
Length = 309
Score = 74.3 bits (181), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 49/170 (28%), Positives = 78/170 (45%), Gaps = 20/170 (11%)
Query: 278 KIPNDGTDVWEIDPKHLKFGSKVASGSYGDLYRG-------TYCSQDVAIKVLKPERINS 330
++P D + WE L G + G++G + T + VA+K+LK +S
Sbjct: 14 RLPYDASK-WEFPRDRLNLGKPLGRGAFGQVIEADAFGIDKTATXRTVAVKMLKEGATHS 72
Query: 331 DMQKEFAQEVFIMRKVRHKNVVQFIGACTKPPS-LCIVTEFMSGGSVYDYLHKLKGVF-- 387
+ + ++ ++ H NVV +GACTKP L ++ EF G++ YL + F
Sbjct: 73 EHRALMSELKILIHIGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVP 132
Query: 388 ---------KLPSLLKVAIDVSKGMNYLHQNNIIHRDLKAANLLMDENEV 428
L L+ + V+KGM +L IHRDL A N+L+ E V
Sbjct: 133 YKDLYKDFLTLEHLIXYSFQVAKGMEFLASRKXIHRDLAARNILLSEKNV 182
>pdb|1FVR|A Chain A, Tie2 Kinase Domain
pdb|1FVR|B Chain B, Tie2 Kinase Domain
Length = 327
Score = 74.3 bits (181), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 49/161 (30%), Positives = 81/161 (50%), Gaps = 21/161 (13%)
Query: 289 IDPKHLKFGSKVASGSYGDLYRGTY----CSQDVAIKVLKPERINSDMQKEFAQEVFIMR 344
+D +KF + G++G + + D AIK +K E + D ++FA E+ ++
Sbjct: 22 LDWNDIKFQDVIGEGNFGQVLKARIKKDGLRMDAAIKRMK-EYASKDDHRDFAGELEVLC 80
Query: 345 KV-RHKNVVQFIGACTKPPSLCIVTEFMSGGSVYDYLHKLKGVFKLPS------------ 391
K+ H N++ +GAC L + E+ G++ D+L K + + P+
Sbjct: 81 KLGHHPNIINLLGACEHRGYLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLS 140
Query: 392 ---LLKVAIDVSKGMNYLHQNNIIHRDLKAANLLMDENEVS 429
LL A DV++GM+YL Q IHRDL A N+L+ EN V+
Sbjct: 141 SQQLLHFAADVARGMDYLSQKQFIHRDLAARNILVGENYVA 181
>pdb|2QOI|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f:y602f
Double Mutant
Length = 373
Score = 74.3 bits (181), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 45/146 (30%), Positives = 73/146 (50%), Gaps = 6/146 (4%)
Query: 288 EIDPKHLKFGSKVASGSYGDLYRG-----TYCSQDVAIKVLKPERINSDMQKEFAQEVFI 342
E+D ++ V +G +G++ G + VAIK LK +++F E I
Sbjct: 41 ELDATNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVG-YTEKQRRDFLGEASI 99
Query: 343 MRKVRHKNVVQFIGACTKPPSLCIVTEFMSGGSVYDYLHKLKGVFKLPSLLKVAIDVSKG 402
M + H N+++ G TK + IVTE+M GS+ +L K F + L+ + ++ G
Sbjct: 100 MGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVIQLVGMLRGIASG 159
Query: 403 MNYLHQNNIIHRDLKAANLLMDENEV 428
M YL +HRDL A N+L++ N V
Sbjct: 160 MKYLSDMGYVHRDLAARNILINSNLV 185
>pdb|2HEN|A Chain A, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|B Chain B, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|C Chain C, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|D Chain D, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
Length = 286
Score = 74.3 bits (181), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 47/146 (32%), Positives = 72/146 (49%), Gaps = 6/146 (4%)
Query: 288 EIDPKHLKFGSKVASGSYGDLYRGTYCSQD-----VAIKVLKPERINSDMQKEFAQEVFI 342
EID +K + +G +G++ G VAIK LK +++F E I
Sbjct: 3 EIDISCVKIEQVIGAGEFGEVCSGHLKLPGKREIFVAIKTLK-SGYTEKQRRDFLSEASI 61
Query: 343 MRKVRHKNVVQFIGACTKPPSLCIVTEFMSGGSVYDYLHKLKGVFKLPSLLKVAIDVSKG 402
M + H NV+ G TK + I+TEFM GS+ +L + G F + L+ + ++ G
Sbjct: 62 MGQFDHPNVIHLEGVVTKSTPVMIITEFMENGSLDSFLRQNDGQFTVIQLVGMLRGIAAG 121
Query: 403 MNYLHQNNIIHRDLKAANLLMDENEV 428
M YL N +HR L A N+L++ N V
Sbjct: 122 MKYLADMNYVHRALAARNILVNSNLV 147
>pdb|2QOK|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:s768a Triple Mutant
Length = 373
Score = 74.3 bits (181), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 45/146 (30%), Positives = 73/146 (50%), Gaps = 6/146 (4%)
Query: 288 EIDPKHLKFGSKVASGSYGDLYRG-----TYCSQDVAIKVLKPERINSDMQKEFAQEVFI 342
E+D ++ V +G +G++ G + VAIK LK +++F E I
Sbjct: 41 ELDATNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVG-YTEKQRRDFLGEASI 99
Query: 343 MRKVRHKNVVQFIGACTKPPSLCIVTEFMSGGSVYDYLHKLKGVFKLPSLLKVAIDVSKG 402
M + H N+++ G TK + IVTE+M GS+ +L K F + L+ + ++ G
Sbjct: 100 MGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVIQLVGMLRGIASG 159
Query: 403 MNYLHQNNIIHRDLKAANLLMDENEV 428
M YL +HRDL A N+L++ N V
Sbjct: 160 MKYLSDMGYVHRDLAARNILINSNLV 185
>pdb|2QOF|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f Mutant
Length = 373
Score = 74.3 bits (181), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 45/146 (30%), Positives = 73/146 (50%), Gaps = 6/146 (4%)
Query: 288 EIDPKHLKFGSKVASGSYGDLYRG-----TYCSQDVAIKVLKPERINSDMQKEFAQEVFI 342
E+D ++ V +G +G++ G + VAIK LK +++F E I
Sbjct: 41 ELDATNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVG-YTEKQRRDFLGEASI 99
Query: 343 MRKVRHKNVVQFIGACTKPPSLCIVTEFMSGGSVYDYLHKLKGVFKLPSLLKVAIDVSKG 402
M + H N+++ G TK + IVTE+M GS+ +L K F + L+ + ++ G
Sbjct: 100 MGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVIQLVGMLRGIASG 159
Query: 403 MNYLHQNNIIHRDLKAANLLMDENEV 428
M YL +HRDL A N+L++ N V
Sbjct: 160 MKYLSDMGYVHRDLAARNILINSNLV 185
>pdb|2QOD|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y602f Mutant
Length = 373
Score = 74.3 bits (181), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 45/146 (30%), Positives = 73/146 (50%), Gaps = 6/146 (4%)
Query: 288 EIDPKHLKFGSKVASGSYGDLYRG-----TYCSQDVAIKVLKPERINSDMQKEFAQEVFI 342
E+D ++ V +G +G++ G + VAIK LK +++F E I
Sbjct: 41 ELDATNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVG-YTEKQRRDFLGEASI 99
Query: 343 MRKVRHKNVVQFIGACTKPPSLCIVTEFMSGGSVYDYLHKLKGVFKLPSLLKVAIDVSKG 402
M + H N+++ G TK + IVTE+M GS+ +L K F + L+ + ++ G
Sbjct: 100 MGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVIQLVGMLRGIASG 159
Query: 403 MNYLHQNNIIHRDLKAANLLMDENEV 428
M YL +HRDL A N+L++ N V
Sbjct: 160 MKYLSDMGYVHRDLAARNILINSNLV 185
>pdb|3CJG|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
3,4,5-Trimethoxy Aniline Containing Pyrimidine
Length = 309
Score = 74.3 bits (181), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 51/182 (28%), Positives = 84/182 (46%), Gaps = 23/182 (12%)
Query: 278 KIPNDGTDVWEIDPKHLKFGSKVASGSYGDLYRG-------TYCSQDVAIKVLKPERINS 330
++P D + WE L G + G++G + T + VA+K+LK +S
Sbjct: 14 RLPYDASK-WEFPRDRLNLGKPLGRGAFGQVIEADAFGIDKTATXRTVAVKMLKEGATHS 72
Query: 331 DMQKEFAQEVFIMRKVRHKNVVQFIGACTKPPS-LCIVTEFMSGGSVYDYLHKLKGVF-- 387
+ + ++ ++ H NVV +GACTKP L ++ EF G++ YL + F
Sbjct: 73 EHRALMSELKILIHIGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVP 132
Query: 388 ---------KLPSLLKVAIDVSKGMNYLHQNNIIHRDLKAANLLMDENEVSLLLSLCLFT 438
L L+ + V+KGM +L IHRDL A N+L+ E V + +C F
Sbjct: 133 YKDLYKDFLTLEHLICYSFQVAKGMEFLASRKXIHRDLAARNILLSEKNV---VKICDFG 189
Query: 439 VS 440
++
Sbjct: 190 LA 191
>pdb|2QOL|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596:y602:s768g Triple Mutant
Length = 373
Score = 74.3 bits (181), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 45/146 (30%), Positives = 73/146 (50%), Gaps = 6/146 (4%)
Query: 288 EIDPKHLKFGSKVASGSYGDLYRG-----TYCSQDVAIKVLKPERINSDMQKEFAQEVFI 342
E+D ++ V +G +G++ G + VAIK LK +++F E I
Sbjct: 41 ELDATNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVG-YTEKQRRDFLGEASI 99
Query: 343 MRKVRHKNVVQFIGACTKPPSLCIVTEFMSGGSVYDYLHKLKGVFKLPSLLKVAIDVSKG 402
M + H N+++ G TK + IVTE+M GS+ +L K F + L+ + ++ G
Sbjct: 100 MGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVIQLVGMLRGIASG 159
Query: 403 MNYLHQNNIIHRDLKAANLLMDENEV 428
M YL +HRDL A N+L++ N V
Sbjct: 160 MKYLSDMGYVHRDLAARNILINSNLV 185
>pdb|3FXX|A Chain A, Human Epha3 Kinase And Juxtamembrane Region Bound To
Substrate Kqwdnye[ptyr]iw
pdb|3FY2|A Chain A, Human Epha3 Kinase And Juxtamembrane Region Bound To
Substrate Kqwdnyefiw
Length = 371
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 45/146 (30%), Positives = 73/146 (50%), Gaps = 6/146 (4%)
Query: 288 EIDPKHLKFGSKVASGSYGDLYRG-----TYCSQDVAIKVLKPERINSDMQKEFAQEVFI 342
E+D ++ V +G +G++ G + VAIK LK +++F E I
Sbjct: 39 ELDATNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVG-YTEKQRRDFLGEASI 97
Query: 343 MRKVRHKNVVQFIGACTKPPSLCIVTEFMSGGSVYDYLHKLKGVFKLPSLLKVAIDVSKG 402
M + H N+++ G TK + IVTE+M GS+ +L K F + L+ + ++ G
Sbjct: 98 MGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVIQLVGMLRGIASG 157
Query: 403 MNYLHQNNIIHRDLKAANLLMDENEV 428
M YL +HRDL A N+L++ N V
Sbjct: 158 MKYLSDMGYVHRDLAARNILINSNLV 183
>pdb|2GSF|A Chain A, The Human Epha3 Receptor Tyrosine Kinase And Juxtamembrane
Region
pdb|2QO2|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Dephosphorylated, Apo Structure
pdb|2QO9|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Phosphorylated, Amp-pnp Bound
Length = 373
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 45/146 (30%), Positives = 73/146 (50%), Gaps = 6/146 (4%)
Query: 288 EIDPKHLKFGSKVASGSYGDLYRG-----TYCSQDVAIKVLKPERINSDMQKEFAQEVFI 342
E+D ++ V +G +G++ G + VAIK LK +++F E I
Sbjct: 41 ELDATNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVG-YTEKQRRDFLGEASI 99
Query: 343 MRKVRHKNVVQFIGACTKPPSLCIVTEFMSGGSVYDYLHKLKGVFKLPSLLKVAIDVSKG 402
M + H N+++ G TK + IVTE+M GS+ +L K F + L+ + ++ G
Sbjct: 100 MGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVIQLVGMLRGIASG 159
Query: 403 MNYLHQNNIIHRDLKAANLLMDENEV 428
M YL +HRDL A N+L++ N V
Sbjct: 160 MKYLSDMGYVHRDLAARNILINSNLV 185
>pdb|3DZQ|A Chain A, Human Epha3 Kinase Domain In Complex With Inhibitor
Awl-Ii- 38.3
pdb|4G2F|A Chain A, Human Epha3 Kinase Domain In Complex With Compound 7
pdb|4GK2|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 66
pdb|4GK3|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 87
pdb|4GK4|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 90
Length = 361
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 45/146 (30%), Positives = 73/146 (50%), Gaps = 6/146 (4%)
Query: 288 EIDPKHLKFGSKVASGSYGDLYRG-----TYCSQDVAIKVLKPERINSDMQKEFAQEVFI 342
E+D ++ V +G +G++ G + VAIK LK +++F E I
Sbjct: 29 ELDATNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVG-YTEKQRRDFLGEASI 87
Query: 343 MRKVRHKNVVQFIGACTKPPSLCIVTEFMSGGSVYDYLHKLKGVFKLPSLLKVAIDVSKG 402
M + H N+++ G TK + IVTE+M GS+ +L K F + L+ + ++ G
Sbjct: 88 MGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVIQLVGMLRGIASG 147
Query: 403 MNYLHQNNIIHRDLKAANLLMDENEV 428
M YL +HRDL A N+L++ N V
Sbjct: 148 MKYLSDMGYVHRDLAARNILINSNLV 173
>pdb|2QOC|A Chain A, Human Epha3 Kinase Domain, Phosphorylated, Amp-Pnp Bound
Structure
Length = 344
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 45/146 (30%), Positives = 73/146 (50%), Gaps = 6/146 (4%)
Query: 288 EIDPKHLKFGSKVASGSYGDLYRG-----TYCSQDVAIKVLKPERINSDMQKEFAQEVFI 342
E+D ++ V +G +G++ G + VAIK LK +++F E I
Sbjct: 12 ELDATNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVG-YTEKQRRDFLGEASI 70
Query: 343 MRKVRHKNVVQFIGACTKPPSLCIVTEFMSGGSVYDYLHKLKGVFKLPSLLKVAIDVSKG 402
M + H N+++ G TK + IVTE+M GS+ +L K F + L+ + ++ G
Sbjct: 71 MGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVIQLVGMLRGIASG 130
Query: 403 MNYLHQNNIIHRDLKAANLLMDENEV 428
M YL +HRDL A N+L++ N V
Sbjct: 131 MKYLSDMGYVHRDLAARNILINSNLV 156
>pdb|2Y6M|A Chain A, Crystal Structure Of Epha4 Kinase Domain
pdb|2Y6O|A Chain A, Crystal Structure Of Epha4 Kinase Domain In Complex With
Dasatinib
Length = 291
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 47/149 (31%), Positives = 73/149 (48%), Gaps = 12/149 (8%)
Query: 288 EIDPKHLKFGSKVASGSYGDLYRGTY--------CSQDVAIKVLKPERINSDMQKEFAQE 339
EID +K + G +G++ G C VAIK LK + +++F E
Sbjct: 10 EIDASCIKIEKVIGVGEFGEVCSGRLKVPGKREIC---VAIKTLKAGYTDKQ-RRDFLSE 65
Query: 340 VFIMRKVRHKNVVQFIGACTKPPSLCIVTEFMSGGSVYDYLHKLKGVFKLPSLLKVAIDV 399
IM + H N++ G TK + I+TE+M GS+ +L K G F + L+ + +
Sbjct: 66 ASIMGQFDHPNIIHLEGVVTKCKPVMIITEYMENGSLDAFLRKNDGRFTVIQLVGMLRGI 125
Query: 400 SKGMNYLHQNNIIHRDLKAANLLMDENEV 428
GM YL + +HRDL A N+L++ N V
Sbjct: 126 GSGMKYLSDMSYVHRDLAARNILVNSNLV 154
>pdb|2XYU|A Chain A, Crystal Structure Of Epha4 Kinase Domain In Complex With
Vuf 12058
Length = 285
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 47/149 (31%), Positives = 73/149 (48%), Gaps = 12/149 (8%)
Query: 288 EIDPKHLKFGSKVASGSYGDLYRGTY--------CSQDVAIKVLKPERINSDMQKEFAQE 339
EID +K + G +G++ G C VAIK LK + +++F E
Sbjct: 4 EIDASCIKIEKVIGVGEFGEVCSGRLKVPGKREIC---VAIKTLKAGYTDKQ-RRDFLSE 59
Query: 340 VFIMRKVRHKNVVQFIGACTKPPSLCIVTEFMSGGSVYDYLHKLKGVFKLPSLLKVAIDV 399
IM + H N++ G TK + I+TE+M GS+ +L K G F + L+ + +
Sbjct: 60 ASIMGQFDHPNIIHLEGVVTKCKPVMIITEYMENGSLDAFLRKNDGRFTVIQLVGMLRGI 119
Query: 400 SKGMNYLHQNNIIHRDLKAANLLMDENEV 428
GM YL + +HRDL A N+L++ N V
Sbjct: 120 GSGMKYLSDMSYVHRDLAARNILVNSNLV 148
>pdb|4FNW|A Chain A, Crystal Structure Of The Apo F1174l Anaplastic Lymphoma
Kinase Catalytic Domain
Length = 327
Score = 73.6 bits (179), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 46/153 (30%), Positives = 78/153 (50%), Gaps = 14/153 (9%)
Query: 284 TDVWEIDPKHLKFGSKVASGSYGDLYRGTYCSQ-------DVAIKVLKPERINSDMQKEF 336
+D+ E+ K++ + G++G++Y G VA+K L PE + + +F
Sbjct: 23 SDLKEVPRKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTL-PEVCSEQDELDF 81
Query: 337 AQEVFIMRKVRHKNVVQFIGACTKPPSLCIVTEFMSGGSVYDYLHKLKGVFKLPS----- 391
E I+ K+ H+N+V+ IG + I+ E M+GG + +L + + PS
Sbjct: 82 LMEALIISKLNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAML 141
Query: 392 -LLKVAIDVSKGMNYLHQNNIIHRDLKAANLLM 423
LL VA D++ G YL +N+ IHRD+ A N L+
Sbjct: 142 DLLHVARDIACGCQYLEENHFIHRDIAARNCLL 174
>pdb|3E62|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
pdb|3E63|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
pdb|3E64|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
Length = 293
Score = 73.6 bits (179), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 46/155 (29%), Positives = 81/155 (52%), Gaps = 11/155 (7%)
Query: 285 DVWEIDPKHLKFGSKVASGSYGDLYRGTY------CSQDVAIKVLKPERINSDMQKEFAQ 338
D + + +HLKF ++ G++G + Y + VA+K L + + ++F +
Sbjct: 2 DPTQFEERHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKL--QHSTEEHLRDFER 59
Query: 339 EVFIMRKVRHKNVVQFIGACTKPP--SLCIVTEFMSGGSVYDYLHKLKGVFKLPSLLKVA 396
E+ I++ ++H N+V++ G C +L ++ E++ GS+ DYL K K LL+
Sbjct: 60 EIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYT 119
Query: 397 IDVSKGMNYLHQNNIIHRDLKAANLLMD-ENEVSL 430
+ KGM YL IHRDL N+L++ EN V +
Sbjct: 120 SQICKGMEYLGTKRYIHRDLATRNILVENENRVKI 154
>pdb|3Q32|A Chain A, Structure Of Janus Kinase 2 With A Pyrrolotriazine
Inhibitor
pdb|3Q32|B Chain B, Structure Of Janus Kinase 2 With A Pyrrolotriazine
Inhibitor
Length = 301
Score = 73.6 bits (179), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 46/155 (29%), Positives = 81/155 (52%), Gaps = 11/155 (7%)
Query: 285 DVWEIDPKHLKFGSKVASGSYGDLYRGTY------CSQDVAIKVLKPERINSDMQKEFAQ 338
D + + +HLKF ++ G++G + Y + VA+K L + + ++F +
Sbjct: 3 DPTQFEERHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKL--QHSTEEHLRDFER 60
Query: 339 EVFIMRKVRHKNVVQFIGACTKPP--SLCIVTEFMSGGSVYDYLHKLKGVFKLPSLLKVA 396
E+ I++ ++H N+V++ G C +L ++ E++ GS+ DYL K K LL+
Sbjct: 61 EIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYT 120
Query: 397 IDVSKGMNYLHQNNIIHRDLKAANLLMD-ENEVSL 430
+ KGM YL IHRDL N+L++ EN V +
Sbjct: 121 SQICKGMEYLGTKRYIHRDLATRNILVENENRVKI 155
>pdb|1GJO|A Chain A, The Fgfr2 Tyrosine Kinase Domain
pdb|1OEC|A Chain A, Fgfr2 Kinase Domain
Length = 316
Score = 73.6 bits (179), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 50/187 (26%), Positives = 86/187 (45%), Gaps = 28/187 (14%)
Query: 267 DTGMKSHPYHLKIPNDGTDVWEIDPKHLKFGSKVASGSYGDLYRGTYCSQD--------- 317
DT M + ++P D WE L G + G +G + D
Sbjct: 4 DTPMLAGVSEYELPEDPK--WEFPRDKLTLGKPLGEGCFGQVVMAEAVGIDKDKPKEAVT 61
Query: 318 VAIKVLKPERINSDMQKEFAQEVFIMRKV-RHKNVVQFIGACTKPPSLCIVTEFMSGGSV 376
VA+K+LK + D+ + E+ +M+ + +HKN++ +GACT+ L ++ E+ S G++
Sbjct: 62 VAVKMLKDDATEKDLS-DLVSEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNL 120
Query: 377 YDYLHKLK--------GVFKLPS-------LLKVAIDVSKGMNYLHQNNIIHRDLKAANL 421
+YL + + ++P L+ +++GM YL IHRDL A N+
Sbjct: 121 REYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLASQKCIHRDLAARNV 180
Query: 422 LMDENEV 428
L+ EN V
Sbjct: 181 LVTENNV 187
>pdb|3TJC|A Chain A, Co-Crystal Structure Of Jak2 With Thienopyridine 8
pdb|3TJC|B Chain B, Co-Crystal Structure Of Jak2 With Thienopyridine 8
pdb|3TJD|A Chain A, Co-Crystal Structure Of Jak2 With Thienopyridine 19
pdb|3TJD|B Chain B, Co-Crystal Structure Of Jak2 With Thienopyridine 19
Length = 298
Score = 73.6 bits (179), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 46/155 (29%), Positives = 81/155 (52%), Gaps = 11/155 (7%)
Query: 285 DVWEIDPKHLKFGSKVASGSYGDLYRGTY------CSQDVAIKVLKPERINSDMQKEFAQ 338
D + + +HLKF ++ G++G + Y + VA+K L + + ++F +
Sbjct: 6 DPTQFEERHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKL--QHSTEEHLRDFER 63
Query: 339 EVFIMRKVRHKNVVQFIGACTKPP--SLCIVTEFMSGGSVYDYLHKLKGVFKLPSLLKVA 396
E+ I++ ++H N+V++ G C +L ++ E++ GS+ DYL K K LL+
Sbjct: 64 EIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYT 123
Query: 397 IDVSKGMNYLHQNNIIHRDLKAANLLMD-ENEVSL 430
+ KGM YL IHRDL N+L++ EN V +
Sbjct: 124 SQICKGMEYLGTKRYIHRDLATRNILVENENRVKI 158
>pdb|4HGE|A Chain A, Jak2 Kinase (Jh1 Domain) In Complex With Compound 8
pdb|4HGE|B Chain B, Jak2 Kinase (Jh1 Domain) In Complex With Compound 8
Length = 300
Score = 73.6 bits (179), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 46/155 (29%), Positives = 81/155 (52%), Gaps = 11/155 (7%)
Query: 285 DVWEIDPKHLKFGSKVASGSYGDLYRGTY------CSQDVAIKVLKPERINSDMQKEFAQ 338
D + + +HLKF ++ G++G + Y + VA+K L + + ++F +
Sbjct: 8 DPTQFEERHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKL--QHSTEEHLRDFER 65
Query: 339 EVFIMRKVRHKNVVQFIGACTKPP--SLCIVTEFMSGGSVYDYLHKLKGVFKLPSLLKVA 396
E+ I++ ++H N+V++ G C +L ++ E++ GS+ DYL K K LL+
Sbjct: 66 EIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYT 125
Query: 397 IDVSKGMNYLHQNNIIHRDLKAANLLMD-ENEVSL 430
+ KGM YL IHRDL N+L++ EN V +
Sbjct: 126 SQICKGMEYLGTKRYIHRDLATRNILVENENRVKI 160
>pdb|4E4M|A Chain A, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|B Chain B, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|D Chain D, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|E Chain E, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4F08|A Chain A, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
pdb|4F08|B Chain B, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
pdb|4F09|A Chain A, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
Length = 302
Score = 73.6 bits (179), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 46/155 (29%), Positives = 81/155 (52%), Gaps = 11/155 (7%)
Query: 285 DVWEIDPKHLKFGSKVASGSYGDLYRGTY------CSQDVAIKVLKPERINSDMQKEFAQ 338
D + + +HLKF ++ G++G + Y + VA+K L + + ++F +
Sbjct: 10 DPTQFEERHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKL--QHSTEEHLRDFER 67
Query: 339 EVFIMRKVRHKNVVQFIGACTKPP--SLCIVTEFMSGGSVYDYLHKLKGVFKLPSLLKVA 396
E+ I++ ++H N+V++ G C +L ++ E++ GS+ DYL K K LL+
Sbjct: 68 EIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYT 127
Query: 397 IDVSKGMNYLHQNNIIHRDLKAANLLMD-ENEVSL 430
+ KGM YL IHRDL N+L++ EN V +
Sbjct: 128 SQICKGMEYLGTKRYIHRDLATRNILVENENRVKI 162
>pdb|2OH4|A Chain A, Crystal Structure Of Vegfr2 With A Benzimidazole-Urea
Inhibitor
Length = 316
Score = 73.6 bits (179), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 51/185 (27%), Positives = 84/185 (45%), Gaps = 26/185 (14%)
Query: 278 KIPNDGTDVWEIDPKHLKFGSKVASGSYGDLYRG-------TYCSQDVAIKVLKPERINS 330
++P D + WE L G + G++G + T + VA+K+LK +S
Sbjct: 15 RLPYDASK-WEFPRDRLNLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHS 73
Query: 331 DMQKEFAQEVFIMRKVRHKNVVQFIGACTKPPS-LCIVTEFMSGGSVYDYLHKLKGVF-- 387
+ + ++ ++ H NVV +GACTKP L ++ EF G++ YL + F
Sbjct: 74 EHRALMSELKILIHIGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVP 133
Query: 388 ------------KLPSLLKVAIDVSKGMNYLHQNNIIHRDLKAANLLMDENEVSLLLSLC 435
L L+ + V+KGM +L IHRDL A N+L+ E V + +C
Sbjct: 134 YKTPEDLYKDFLTLEHLICYSFQVAKGMEFLASRKCIHRDLAARNILLSEKNV---VKIC 190
Query: 436 LFTVS 440
F ++
Sbjct: 191 DFGLA 195
>pdb|2B7A|A Chain A, The Structural Basis Of Janus Kinase 2 Inhibition By A
Potent And Specific Pan-Janus Kinase Inhibitor
pdb|2B7A|B Chain B, The Structural Basis Of Janus Kinase 2 Inhibition By A
Potent And Specific Pan-Janus Kinase Inhibitor
pdb|3FUP|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
pdb|3FUP|B Chain B, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
Length = 293
Score = 73.6 bits (179), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 46/155 (29%), Positives = 81/155 (52%), Gaps = 11/155 (7%)
Query: 285 DVWEIDPKHLKFGSKVASGSYGDLYRGTY------CSQDVAIKVLKPERINSDMQKEFAQ 338
D + + +HLKF ++ G++G + Y + VA+K L + + ++F +
Sbjct: 1 DPTQFEERHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKL--QHSTEEHLRDFER 58
Query: 339 EVFIMRKVRHKNVVQFIGACTKPP--SLCIVTEFMSGGSVYDYLHKLKGVFKLPSLLKVA 396
E+ I++ ++H N+V++ G C +L ++ E++ GS+ DYL K K LL+
Sbjct: 59 EIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYT 118
Query: 397 IDVSKGMNYLHQNNIIHRDLKAANLLMD-ENEVSL 430
+ KGM YL IHRDL N+L++ EN V +
Sbjct: 119 SQICKGMEYLGTKRYIHRDLATRNILVENENRVKI 153
>pdb|3RVG|A Chain A, Crystals Structure Of Jak2 With A
1-Amino-5h-Pyrido[4,3-B]indol-4- Carboxamide Inhibitor
Length = 303
Score = 73.6 bits (179), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 46/155 (29%), Positives = 81/155 (52%), Gaps = 11/155 (7%)
Query: 285 DVWEIDPKHLKFGSKVASGSYGDLYRGTY------CSQDVAIKVLKPERINSDMQKEFAQ 338
D + + +HLKF ++ G++G + Y + VA+K L + + ++F +
Sbjct: 7 DPTQFEERHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKL--QHSTEEHLRDFER 64
Query: 339 EVFIMRKVRHKNVVQFIGACTKPP--SLCIVTEFMSGGSVYDYLHKLKGVFKLPSLLKVA 396
E+ I++ ++H N+V++ G C +L ++ E++ GS+ DYL K K LL+
Sbjct: 65 EIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYT 124
Query: 397 IDVSKGMNYLHQNNIIHRDLKAANLLMD-ENEVSL 430
+ KGM YL IHRDL N+L++ EN V +
Sbjct: 125 SQICKGMEYLGTKRYIHRDLATRNILVENENRVKI 159
>pdb|2YJR|A Chain A, Structure Of F1174l Mutant Anaplastic Lymphoma Kinase
Length = 342
Score = 73.6 bits (179), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 46/153 (30%), Positives = 78/153 (50%), Gaps = 14/153 (9%)
Query: 284 TDVWEIDPKHLKFGSKVASGSYGDLYRGTYCSQ-------DVAIKVLKPERINSDMQKEF 336
+D+ E+ K++ + G++G++Y G VA+K L PE + + +F
Sbjct: 37 SDLKEVPRKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTL-PEVCSEQDELDF 95
Query: 337 AQEVFIMRKVRHKNVVQFIGACTKPPSLCIVTEFMSGGSVYDYLHKLKGVFKLPS----- 391
E I+ K+ H+N+V+ IG + I+ E M+GG + +L + + PS
Sbjct: 96 LMEALIISKLNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAML 155
Query: 392 -LLKVAIDVSKGMNYLHQNNIIHRDLKAANLLM 423
LL VA D++ G YL +N+ IHRD+ A N L+
Sbjct: 156 DLLHVARDIACGCQYLEENHFIHRDIAARNCLL 188
>pdb|2W1I|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1I|B Chain B, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 326
Score = 73.6 bits (179), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 46/155 (29%), Positives = 81/155 (52%), Gaps = 11/155 (7%)
Query: 285 DVWEIDPKHLKFGSKVASGSYGDLYRGTY------CSQDVAIKVLKPERINSDMQKEFAQ 338
D + + +HLKF ++ G++G + Y + VA+K L + + ++F +
Sbjct: 34 DPTQFEERHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKL--QHSTEEHLRDFER 91
Query: 339 EVFIMRKVRHKNVVQFIGACTKPP--SLCIVTEFMSGGSVYDYLHKLKGVFKLPSLLKVA 396
E+ I++ ++H N+V++ G C +L ++ E++ GS+ DYL K K LL+
Sbjct: 92 EIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYT 151
Query: 397 IDVSKGMNYLHQNNIIHRDLKAANLLMD-ENEVSL 430
+ KGM YL IHRDL N+L++ EN V +
Sbjct: 152 SQICKGMEYLGTKRYIHRDLATRNILVENENRVKI 186
>pdb|4AQC|A Chain A, Triazolopyridine-Based Inhibitor Of Janus Kinase 2
pdb|4AQC|B Chain B, Triazolopyridine-Based Inhibitor Of Janus Kinase 2
Length = 301
Score = 73.6 bits (179), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 46/155 (29%), Positives = 81/155 (52%), Gaps = 11/155 (7%)
Query: 285 DVWEIDPKHLKFGSKVASGSYGDLYRGTY------CSQDVAIKVLKPERINSDMQKEFAQ 338
D + + +HLKF ++ G++G + Y + VA+K L + + ++F +
Sbjct: 9 DPTQFEERHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKL--QHSTEEHLRDFER 66
Query: 339 EVFIMRKVRHKNVVQFIGACTKPP--SLCIVTEFMSGGSVYDYLHKLKGVFKLPSLLKVA 396
E+ I++ ++H N+V++ G C +L ++ E++ GS+ DYL K K LL+
Sbjct: 67 EIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYT 126
Query: 397 IDVSKGMNYLHQNNIIHRDLKAANLLMD-ENEVSL 430
+ KGM YL IHRDL N+L++ EN V +
Sbjct: 127 SQICKGMEYLGTKRYIHRDLATRNILVENENRVKI 161
>pdb|3GQI|A Chain A, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
Length = 326
Score = 73.2 bits (178), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 46/167 (27%), Positives = 78/167 (46%), Gaps = 26/167 (15%)
Query: 287 WEIDPKHLKFGSKVASGSYGDLYRGTYCSQD---------VAIKVLKPERINSDMQKEFA 337
WE+ L G + G++G + D VA+K+LK + D+ +
Sbjct: 23 WELPRDRLVLGKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLS-DLI 81
Query: 338 QEVFIMRKV-RHKNVVQFIGACTKPPSLCIVTEFMSGGSVYDYL---------------H 381
E+ +M+ + +HKN++ +GACT+ L ++ E+ S G++ +YL H
Sbjct: 82 SEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEFSFNPSH 141
Query: 382 KLKGVFKLPSLLKVAIDVSKGMNYLHQNNIIHRDLKAANLLMDENEV 428
+ L+ A V++GM YL IHRDL A N+L+ E+ V
Sbjct: 142 NPEEQLSSKDLVSCAYQVARGMEYLASKKCIHRDLAARNVLVTEDNV 188
>pdb|3TT0|A Chain A, Co-Structure Of Fibroblast Growth Factor Receptor 1 Kinase
Domain With
3-(2,6-Dichloro-3,
5-Dimethoxy-Phenyl)-1-{6-[4-(4-Ethyl-Piperazin-1-
Yl)-Phenylamino]-Pyrimidin-4-Yl}-1-Methyl-Urea (Bgj398)
pdb|3TT0|B Chain B, Co-Structure Of Fibroblast Growth Factor Receptor 1 Kinase
Domain With
3-(2,6-Dichloro-3,
5-Dimethoxy-Phenyl)-1-{6-[4-(4-Ethyl-Piperazin-1-
Yl)-Phenylamino]-Pyrimidin-4-Yl}-1-Methyl-Urea (Bgj398)
Length = 382
Score = 73.2 bits (178), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 50/185 (27%), Positives = 85/185 (45%), Gaps = 28/185 (15%)
Query: 269 GMKSHPYHLKIPNDGTDVWEIDPKHLKFGSKVASGSYGDLYRGTYCSQD---------VA 319
GM + ++P D WE+ L G + G++G + D VA
Sbjct: 48 GMLAGVSEYELPEDPR--WELPRDRLVLGKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVA 105
Query: 320 IKVLKPERINSDMQKEFAQEVFIMRKV-RHKNVVQFIGACTKPPSLCIVTEFMSGGSVYD 378
+K+LK + D+ + E+ +M+ + +HKN++ +GACT+ L ++ E+ S G++ +
Sbjct: 106 VKMLKSDATEKDLS-DLISEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLRE 164
Query: 379 YL---------------HKLKGVFKLPSLLKVAIDVSKGMNYLHQNNIIHRDLKAANLLM 423
YL H + L+ A V++GM YL IHRDL A N+L+
Sbjct: 165 YLQARRPPGLEYSYNPSHNPEEQLSSKDLVSCAYQVARGMEYLASKKCIHRDLAARNVLV 224
Query: 424 DENEV 428
E+ V
Sbjct: 225 TEDNV 229
>pdb|4FOB|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Acyliminobenzimidazole Inhibitor 1
pdb|4FOC|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Acyliminobenzimidazole Inhibitor 2
Length = 353
Score = 73.2 bits (178), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 46/153 (30%), Positives = 77/153 (50%), Gaps = 14/153 (9%)
Query: 284 TDVWEIDPKHLKFGSKVASGSYGDLYRGTYCSQ-------DVAIKVLKPERINSDMQKEF 336
+D+ E+ K++ + G++G++Y G VA+K L PE + + +F
Sbjct: 49 SDLKEVPRKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTL-PEVCSEQDELDF 107
Query: 337 AQEVFIMRKVRHKNVVQFIGACTKPPSLCIVTEFMSGGSVYDYLHKLKGVFKLPS----- 391
E I+ K H+N+V+ IG + I+ E M+GG + +L + + PS
Sbjct: 108 LMEALIISKFNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAML 167
Query: 392 -LLKVAIDVSKGMNYLHQNNIIHRDLKAANLLM 423
LL VA D++ G YL +N+ IHRD+ A N L+
Sbjct: 168 DLLHVARDIACGCQYLEENHFIHRDIAARNCLL 200
>pdb|4E6D|A Chain A, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 7
pdb|4E6D|B Chain B, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 7
pdb|4E6Q|A Chain A, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 12
pdb|4E6Q|B Chain B, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 12
Length = 298
Score = 73.2 bits (178), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 46/155 (29%), Positives = 81/155 (52%), Gaps = 11/155 (7%)
Query: 285 DVWEIDPKHLKFGSKVASGSYGDLYRGTY------CSQDVAIKVLKPERINSDMQKEFAQ 338
D + + +HLKF ++ G++G + Y + VA+K L + + ++F +
Sbjct: 6 DPTQFEERHLKFLRQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKL--QHSTEEHLRDFER 63
Query: 339 EVFIMRKVRHKNVVQFIGACTKPP--SLCIVTEFMSGGSVYDYLHKLKGVFKLPSLLKVA 396
E+ I++ ++H N+V++ G C +L ++ EF+ GS+ +YL K K LL+
Sbjct: 64 EIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEFLPYGSLREYLQKHKERIDHIKLLQYT 123
Query: 397 IDVSKGMNYLHQNNIIHRDLKAANLLMD-ENEVSL 430
+ KGM YL IHRDL N+L++ EN V +
Sbjct: 124 SQICKGMEYLGTKRYIHRDLATRNILVENENRVKI 158
>pdb|4FNZ|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Piperidine-Carboxamide Inhibitor 2
Length = 327
Score = 73.2 bits (178), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 46/153 (30%), Positives = 77/153 (50%), Gaps = 14/153 (9%)
Query: 284 TDVWEIDPKHLKFGSKVASGSYGDLYRGTYCSQ-------DVAIKVLKPERINSDMQKEF 336
+D+ E+ K++ + G++G++Y G VA+K L PE + + +F
Sbjct: 23 SDLKEVPRKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTL-PEVCSEQDELDF 81
Query: 337 AQEVFIMRKVRHKNVVQFIGACTKPPSLCIVTEFMSGGSVYDYLHKLKGVFKLPS----- 391
E I+ K H+N+V+ IG + I+ E M+GG + +L + + PS
Sbjct: 82 LMEALIISKFNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAML 141
Query: 392 -LLKVAIDVSKGMNYLHQNNIIHRDLKAANLLM 423
LL VA D++ G YL +N+ IHRD+ A N L+
Sbjct: 142 DLLHVARDIACGCQYLEENHFIHRDIAARNCLL 174
>pdb|2YFX|A Chain A, Structure Of L1196m Mutant Anaplastic Lymphoma Kinase In
Complex With Crizotinib
Length = 327
Score = 73.2 bits (178), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 46/153 (30%), Positives = 77/153 (50%), Gaps = 14/153 (9%)
Query: 284 TDVWEIDPKHLKFGSKVASGSYGDLYRGTYCSQ-------DVAIKVLKPERINSDMQKEF 336
+D+ E+ K++ + G++G++Y G VA+K L PE + + +F
Sbjct: 22 SDLKEVPRKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTL-PEVCSEQDELDF 80
Query: 337 AQEVFIMRKVRHKNVVQFIGACTKPPSLCIVTEFMSGGSVYDYLHKLKGVFKLPS----- 391
E I+ K H+N+V+ IG + I+ E M+GG + +L + + PS
Sbjct: 81 LMEALIISKFNHQNIVRCIGVSLQSLPRFILMELMAGGDLKSFLRETRPRPSQPSSLAML 140
Query: 392 -LLKVAIDVSKGMNYLHQNNIIHRDLKAANLLM 423
LL VA D++ G YL +N+ IHRD+ A N L+
Sbjct: 141 DLLHVARDIACGCQYLEENHFIHRDIAARNCLL 173
>pdb|4F63|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 1
pdb|4F63|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 1
pdb|4F64|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 6
pdb|4F64|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 6
pdb|4F65|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 8
pdb|4F65|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 8
Length = 309
Score = 73.2 bits (178), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 46/167 (27%), Positives = 78/167 (46%), Gaps = 26/167 (15%)
Query: 287 WEIDPKHLKFGSKVASGSYGDLYRGTYCSQD---------VAIKVLKPERINSDMQKEFA 337
WE+ L G + G++G + D VA+K+LK + D+ +
Sbjct: 15 WELPRDRLVLGKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLS-DLI 73
Query: 338 QEVFIMRKV-RHKNVVQFIGACTKPPSLCIVTEFMSGGSVYDYL---------------H 381
E+ +M+ + +HKN++ +GACT+ L ++ E+ S G++ +YL H
Sbjct: 74 SEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSH 133
Query: 382 KLKGVFKLPSLLKVAIDVSKGMNYLHQNNIIHRDLKAANLLMDENEV 428
+ L+ A V++GM YL IHRDL A N+L+ E+ V
Sbjct: 134 NPEEQLSSKDLVSCAYQVARGMEYLASKKCIHRDLAARNVLVTEDNV 180
>pdb|4FNX|A Chain A, Crystal Structure Of The Apo R1275q Anaplastic Lymphoma
Kinase Catalytic Domain
pdb|4FNY|A Chain A, Crystal Structure Of The R1275q Anaplastic Lymphoma Kinase
Catalytic Domain In Complex With A Benzoxazole Inhibitor
Length = 327
Score = 73.2 bits (178), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 46/153 (30%), Positives = 77/153 (50%), Gaps = 14/153 (9%)
Query: 284 TDVWEIDPKHLKFGSKVASGSYGDLYRGTYCSQ-------DVAIKVLKPERINSDMQKEF 336
+D+ E+ K++ + G++G++Y G VA+K L PE + + +F
Sbjct: 23 SDLKEVPRKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTL-PEVCSEQDELDF 81
Query: 337 AQEVFIMRKVRHKNVVQFIGACTKPPSLCIVTEFMSGGSVYDYLHKLKGVFKLPS----- 391
E I+ K H+N+V+ IG + I+ E M+GG + +L + + PS
Sbjct: 82 LMEALIISKFNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAML 141
Query: 392 -LLKVAIDVSKGMNYLHQNNIIHRDLKAANLLM 423
LL VA D++ G YL +N+ IHRD+ A N L+
Sbjct: 142 DLLHVARDIACGCQYLEENHFIHRDIAARNCLL 174
>pdb|3KXX|A Chain A, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|B Chain B, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|C Chain C, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|D Chain D, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
Length = 317
Score = 73.2 bits (178), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 46/167 (27%), Positives = 78/167 (46%), Gaps = 26/167 (15%)
Query: 287 WEIDPKHLKFGSKVASGSYGDLYRGTYCSQD---------VAIKVLKPERINSDMQKEFA 337
WE+ L G + G++G + D VA+K+LK + D+ +
Sbjct: 23 WELPRDRLVLGKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLS-DLI 81
Query: 338 QEVFIMRKV-RHKNVVQFIGACTKPPSLCIVTEFMSGGSVYDYL---------------H 381
E+ +M+ + +HKN++ +GACT+ L ++ E+ S G++ +YL H
Sbjct: 82 SEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLQAREPPGLEYSYNPSH 141
Query: 382 KLKGVFKLPSLLKVAIDVSKGMNYLHQNNIIHRDLKAANLLMDENEV 428
+ L+ A V++GM YL IHRDL A N+L+ E+ V
Sbjct: 142 NPEEQLSSKDLVSCAYQVARGMEYLASKKCIHRDLAARNVLVTEDNV 188
>pdb|2YHV|A Chain A, Structure Of L1196m Mutant Anaplastic Lymphoma Kinase
Length = 342
Score = 73.2 bits (178), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 46/153 (30%), Positives = 77/153 (50%), Gaps = 14/153 (9%)
Query: 284 TDVWEIDPKHLKFGSKVASGSYGDLYRGTYCSQ-------DVAIKVLKPERINSDMQKEF 336
+D+ E+ K++ + G++G++Y G VA+K L PE + + +F
Sbjct: 37 SDLKEVPRKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTL-PEVCSEQDELDF 95
Query: 337 AQEVFIMRKVRHKNVVQFIGACTKPPSLCIVTEFMSGGSVYDYLHKLKGVFKLPS----- 391
E I+ K H+N+V+ IG + I+ E M+GG + +L + + PS
Sbjct: 96 LMEALIISKFNHQNIVRCIGVSLQSLPRFILMELMAGGDLKSFLRETRPRPSQPSSLAML 155
Query: 392 -LLKVAIDVSKGMNYLHQNNIIHRDLKAANLLM 423
LL VA D++ G YL +N+ IHRD+ A N L+
Sbjct: 156 DLLHVARDIACGCQYLEENHFIHRDIAARNCLL 188
>pdb|3RHX|B Chain B, Crystal Structure Of The Catalytic Domain Of Fgfr1 Kinase
In Complex With Arq 069
pdb|3RHX|A Chain A, Crystal Structure Of The Catalytic Domain Of Fgfr1 Kinase
In Complex With Arq 069
Length = 306
Score = 73.2 bits (178), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 46/167 (27%), Positives = 78/167 (46%), Gaps = 26/167 (15%)
Query: 287 WEIDPKHLKFGSKVASGSYGDLYRGTYCSQD---------VAIKVLKPERINSDMQKEFA 337
WE+ L G + G++G + D VA+K+LK + D+ +
Sbjct: 12 WELPRDRLVLGKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLS-DLI 70
Query: 338 QEVFIMRKV-RHKNVVQFIGACTKPPSLCIVTEFMSGGSVYDYL---------------H 381
E+ +M+ + +HKN++ +GACT+ L ++ E+ S G++ +YL H
Sbjct: 71 SEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSH 130
Query: 382 KLKGVFKLPSLLKVAIDVSKGMNYLHQNNIIHRDLKAANLLMDENEV 428
+ L+ A V++GM YL IHRDL A N+L+ E+ V
Sbjct: 131 NPEEQLSSKDLVSCAYQVARGMEYLASKKCIHRDLAARNVLVTEDNV 177
>pdb|3JS2|A Chain A, Crystal Structure Of Minimal Kinase Domain Of Fibroblast
Growth Factor Receptor 1 In Complex With 5-(2-Thienyl)
Nicotinic Acid
pdb|3JS2|B Chain B, Crystal Structure Of Minimal Kinase Domain Of Fibroblast
Growth Factor Receptor 1 In Complex With 5-(2-Thienyl)
Nicotinic Acid
pdb|3KY2|A Chain A, Crystal Structure Of Fibroblast Growth Factor Receptor 1
Kinase Domain
pdb|3KY2|B Chain B, Crystal Structure Of Fibroblast Growth Factor Receptor 1
Kinase Domain
Length = 317
Score = 73.2 bits (178), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 46/167 (27%), Positives = 78/167 (46%), Gaps = 26/167 (15%)
Query: 287 WEIDPKHLKFGSKVASGSYGDLYRGTYCSQD---------VAIKVLKPERINSDMQKEFA 337
WE+ L G + G++G + D VA+K+LK + D+ +
Sbjct: 23 WELPRDRLVLGKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLS-DLI 81
Query: 338 QEVFIMRKV-RHKNVVQFIGACTKPPSLCIVTEFMSGGSVYDYL---------------H 381
E+ +M+ + +HKN++ +GACT+ L ++ E+ S G++ +YL H
Sbjct: 82 SEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSH 141
Query: 382 KLKGVFKLPSLLKVAIDVSKGMNYLHQNNIIHRDLKAANLLMDENEV 428
+ L+ A V++GM YL IHRDL A N+L+ E+ V
Sbjct: 142 NPEEQLSSKDLVSCAYQVARGMEYLASKKCIHRDLAARNVLVTEDNV 188
>pdb|1FGK|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1
pdb|1FGK|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1
pdb|1FGI|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su5402 Inhibitor
pdb|1FGI|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su5402 Inhibitor
pdb|1AGW|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su4984 Inhibitor
pdb|1AGW|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su4984 Inhibitor
pdb|2FGI|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of Fgf
Receptor 1 In Complex With Inhibitor Pd173074
pdb|2FGI|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of Fgf
Receptor 1 In Complex With Inhibitor Pd173074
Length = 310
Score = 72.8 bits (177), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 46/167 (27%), Positives = 78/167 (46%), Gaps = 26/167 (15%)
Query: 287 WEIDPKHLKFGSKVASGSYGDLYRGTYCSQD---------VAIKVLKPERINSDMQKEFA 337
WE+ L G + G++G + D VA+K+LK + D+ +
Sbjct: 16 WELPRDRLVLGKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLS-DLI 74
Query: 338 QEVFIMRKV-RHKNVVQFIGACTKPPSLCIVTEFMSGGSVYDYL---------------H 381
E+ +M+ + +HKN++ +GACT+ L ++ E+ S G++ +YL H
Sbjct: 75 SEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSH 134
Query: 382 KLKGVFKLPSLLKVAIDVSKGMNYLHQNNIIHRDLKAANLLMDENEV 428
+ L+ A V++GM YL IHRDL A N+L+ E+ V
Sbjct: 135 NPEEQLSSKDLVSCAYQVARGMEYLASKKCIHRDLAARNVLVTEDNV 181
>pdb|3C4F|A Chain A, Fgfr Tyrosine Kinase Domain In Complex With 3-(3-
Methoxybenzyl)-7-Azaindole
pdb|3C4F|B Chain B, Fgfr Tyrosine Kinase Domain In Complex With 3-(3-
Methoxybenzyl)-7-Azaindole
Length = 302
Score = 72.8 bits (177), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 46/167 (27%), Positives = 78/167 (46%), Gaps = 26/167 (15%)
Query: 287 WEIDPKHLKFGSKVASGSYGDLYRGTYCSQD---------VAIKVLKPERINSDMQKEFA 337
WE+ L G + G++G + D VA+K+LK + D+ +
Sbjct: 8 WELPRDRLVLGKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLS-DLI 66
Query: 338 QEVFIMRKV-RHKNVVQFIGACTKPPSLCIVTEFMSGGSVYDYL---------------H 381
E+ +M+ + +HKN++ +GACT+ L ++ E+ S G++ +YL H
Sbjct: 67 SEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYCYNPSH 126
Query: 382 KLKGVFKLPSLLKVAIDVSKGMNYLHQNNIIHRDLKAANLLMDENEV 428
+ L+ A V++GM YL IHRDL A N+L+ E+ V
Sbjct: 127 NPEEQLSSKDLVSCAYQVARGMEYLASKKCIHRDLAARNVLVTEDNV 173
>pdb|2PVF|A Chain A, Crystal Structure Of Tyrosine Phosphorylated Activated Fgf
Receptor 2 (Fgfr2) Kinase Domain In Complex With Atp
Analog And Substrate Peptide
Length = 334
Score = 72.8 bits (177), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 45/167 (26%), Positives = 79/167 (47%), Gaps = 26/167 (15%)
Query: 287 WEIDPKHLKFGSKVASGSYGDLYRGTYCSQD---------VAIKVLKPERINSDMQKEFA 337
WE L G + G++G + D VA+K+LK + D+ +
Sbjct: 30 WEFPRDKLTLGKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLS-DLV 88
Query: 338 QEVFIMRKV-RHKNVVQFIGACTKPPSLCIVTEFMSGGSVYDYLHKLK--------GVFK 388
E+ +M+ + +HKN++ +GACT+ L ++ E+ S G++ +YL + + +
Sbjct: 89 SEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEXSYDINR 148
Query: 389 LPS-------LLKVAIDVSKGMNYLHQNNIIHRDLKAANLLMDENEV 428
+P L+ +++GM YL IHRDL A N+L+ EN V
Sbjct: 149 VPEEQMTFKDLVSCTYQLARGMEYLASQKCIHRDLAARNVLVTENNV 195
>pdb|3L9P|A Chain A, Crystal Structure Of The Anaplastic Lymphoma Kinase
Catalytic Domain
Length = 367
Score = 72.8 bits (177), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 46/153 (30%), Positives = 77/153 (50%), Gaps = 14/153 (9%)
Query: 284 TDVWEIDPKHLKFGSKVASGSYGDLYRGTYCSQ-------DVAIKVLKPERINSDMQKEF 336
+D+ E+ K++ + G++G++Y G VA+K L PE + + +F
Sbjct: 63 SDLKEVPRKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTL-PEVCSEQDELDF 121
Query: 337 AQEVFIMRKVRHKNVVQFIGACTKPPSLCIVTEFMSGGSVYDYLHKLKGVFKLPS----- 391
E I+ K H+N+V+ IG + I+ E M+GG + +L + + PS
Sbjct: 122 LMEALIISKFNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAML 181
Query: 392 -LLKVAIDVSKGMNYLHQNNIIHRDLKAANLLM 423
LL VA D++ G YL +N+ IHRD+ A N L+
Sbjct: 182 DLLHVARDIACGCQYLEENHFIHRDIAARNCLL 214
>pdb|3GQL|A Chain A, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
pdb|3GQL|B Chain B, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
pdb|3GQL|C Chain C, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
Length = 326
Score = 72.8 bits (177), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 46/167 (27%), Positives = 78/167 (46%), Gaps = 26/167 (15%)
Query: 287 WEIDPKHLKFGSKVASGSYGDLYRGTYCSQD---------VAIKVLKPERINSDMQKEFA 337
WE+ L G + G++G + D VA+K+LK + D+ +
Sbjct: 23 WELPRDRLVLGKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLS-DLI 81
Query: 338 QEVFIMRKV-RHKNVVQFIGACTKPPSLCIVTEFMSGGSVYDYL---------------H 381
E+ +M+ + +HKN++ +GACT+ L ++ E+ S G++ +YL H
Sbjct: 82 SEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYCYNPSH 141
Query: 382 KLKGVFKLPSLLKVAIDVSKGMNYLHQNNIIHRDLKAANLLMDENEV 428
+ L+ A V++GM YL IHRDL A N+L+ E+ V
Sbjct: 142 NPEEQLSSKDLVSCAYQVARGMEYLASKKCIHRDLAARNVLVTEDNV 188
>pdb|3LCT|A Chain A, Crystal Structure Of The Anaplastic Lymphoma Kinase
Catalytic Domain
pdb|3LCS|A Chain A, Crystal Structure Of The Anaplastic Lymphoma Kinase
Catalytic Domain
Length = 344
Score = 72.8 bits (177), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 46/153 (30%), Positives = 77/153 (50%), Gaps = 14/153 (9%)
Query: 284 TDVWEIDPKHLKFGSKVASGSYGDLYRGTYCSQ-------DVAIKVLKPERINSDMQKEF 336
+D+ E+ K++ + G++G++Y G VA+K L PE + + +F
Sbjct: 40 SDLKEVPRKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTL-PEVCSEQDELDF 98
Query: 337 AQEVFIMRKVRHKNVVQFIGACTKPPSLCIVTEFMSGGSVYDYLHKLKGVFKLPS----- 391
E I+ K H+N+V+ IG + I+ E M+GG + +L + + PS
Sbjct: 99 LMEALIISKFNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAML 158
Query: 392 -LLKVAIDVSKGMNYLHQNNIIHRDLKAANLLM 423
LL VA D++ G YL +N+ IHRD+ A N L+
Sbjct: 159 DLLHVARDIACGCQYLEENHFIHRDIAARNCLL 191
>pdb|2XP2|A Chain A, Structure Of The Human Anaplastic Lymphoma Kinase In
Complex With Crizotinib (Pf-02341066)
Length = 327
Score = 72.8 bits (177), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 46/153 (30%), Positives = 77/153 (50%), Gaps = 14/153 (9%)
Query: 284 TDVWEIDPKHLKFGSKVASGSYGDLYRGTYCSQ-------DVAIKVLKPERINSDMQKEF 336
+D+ E+ K++ + G++G++Y G VA+K L PE + + +F
Sbjct: 22 SDLKEVPRKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTL-PEVCSEQDELDF 80
Query: 337 AQEVFIMRKVRHKNVVQFIGACTKPPSLCIVTEFMSGGSVYDYLHKLKGVFKLPS----- 391
E I+ K H+N+V+ IG + I+ E M+GG + +L + + PS
Sbjct: 81 LMEALIISKFNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAML 140
Query: 392 -LLKVAIDVSKGMNYLHQNNIIHRDLKAANLLM 423
LL VA D++ G YL +N+ IHRD+ A N L+
Sbjct: 141 DLLHVARDIACGCQYLEENHFIHRDIAARNCLL 173
>pdb|3CLY|A Chain A, Crystal Structure Of Fgf Receptor 2 (Fgfr2) Kinase Domains
Trapped In Trans-Phosphorylation Reaction
Length = 334
Score = 72.8 bits (177), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 45/167 (26%), Positives = 79/167 (47%), Gaps = 26/167 (15%)
Query: 287 WEIDPKHLKFGSKVASGSYGDLYRGTYCSQD---------VAIKVLKPERINSDMQKEFA 337
WE L G + G++G + D VA+K+LK + D+ +
Sbjct: 30 WEFPRDKLTLGKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLS-DLV 88
Query: 338 QEVFIMRKV-RHKNVVQFIGACTKPPSLCIVTEFMSGGSVYDYLHKLK--------GVFK 388
E+ +M+ + +HKN++ +GACT+ L ++ E+ S G++ +YL + + +
Sbjct: 89 SEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINR 148
Query: 389 LPS-------LLKVAIDVSKGMNYLHQNNIIHRDLKAANLLMDENEV 428
+P L+ +++GM YL IHRDL A N+L+ EN V
Sbjct: 149 VPEEQMTFKDLVSCTYQLARGMEYLASQKCIHRDLAARNVLVTENNV 195
>pdb|2WQB|A Chain A, Structure Of The Tie2 Kinase Domain In Complex With A
Thiazolopyrimidine Inhibitor
Length = 324
Score = 72.8 bits (177), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 48/161 (29%), Positives = 81/161 (50%), Gaps = 21/161 (13%)
Query: 289 IDPKHLKFGSKVASGSYGDLYRGTY----CSQDVAIKVLKPERINSDMQKEFAQEVFIMR 344
+D +KF + G++G + + D AIK +K E + D ++FA E+ ++
Sbjct: 19 LDWNDIKFQDVIGEGNFGQVLKARIKKDGLRMDAAIKRMK-EYASKDDHRDFAGELEVLC 77
Query: 345 KV-RHKNVVQFIGACTKPPSLCIVTEFMSGGSVYDYLHKLKGVFKLPS------------ 391
K+ H N++ +GAC L + E+ G++ D+L K + + P+
Sbjct: 78 KLGHHPNIINLLGACEHRGYLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLS 137
Query: 392 ---LLKVAIDVSKGMNYLHQNNIIHRDLKAANLLMDENEVS 429
LL A DV++GM+YL Q IHR+L A N+L+ EN V+
Sbjct: 138 SQQLLHFAADVARGMDYLSQKQFIHRNLAARNILVGENYVA 178
>pdb|4DCE|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With A Piperidine-Carboxamide Inhibitor
pdb|4DCE|B Chain B, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With A Piperidine-Carboxamide Inhibitor
pdb|4FOD|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Acyliminobenzimidazole Inhibitor 36
Length = 333
Score = 72.8 bits (177), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 46/153 (30%), Positives = 77/153 (50%), Gaps = 14/153 (9%)
Query: 284 TDVWEIDPKHLKFGSKVASGSYGDLYRGTYCSQ-------DVAIKVLKPERINSDMQKEF 336
+D+ E+ K++ + G++G++Y G VA+K L PE + + +F
Sbjct: 29 SDLKEVPRKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTL-PEVCSEQDELDF 87
Query: 337 AQEVFIMRKVRHKNVVQFIGACTKPPSLCIVTEFMSGGSVYDYLHKLKGVFKLPS----- 391
E I+ K H+N+V+ IG + I+ E M+GG + +L + + PS
Sbjct: 88 LMEALIISKFNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAML 147
Query: 392 -LLKVAIDVSKGMNYLHQNNIIHRDLKAANLLM 423
LL VA D++ G YL +N+ IHRD+ A N L+
Sbjct: 148 DLLHVARDIACGCQYLEENHFIHRDIAARNCLL 180
>pdb|2XB7|A Chain A, Structure Of Human Anaplastic Lymphoma Kinase In Complex
With Nvp- Tae684
pdb|2XBA|A Chain A, Structure Of Human Anaplastic Lymphoma Kinase In Complex
With Pha-E429
Length = 315
Score = 72.8 bits (177), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 46/153 (30%), Positives = 77/153 (50%), Gaps = 14/153 (9%)
Query: 284 TDVWEIDPKHLKFGSKVASGSYGDLYRGTYCSQ-------DVAIKVLKPERINSDMQKEF 336
+D+ E+ K++ + G++G++Y G VA+K L PE + + +F
Sbjct: 14 SDLKEVPRKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTL-PEVCSEQDELDF 72
Query: 337 AQEVFIMRKVRHKNVVQFIGACTKPPSLCIVTEFMSGGSVYDYLHKLKGVFKLPS----- 391
E I+ K H+N+V+ IG + I+ E M+GG + +L + + PS
Sbjct: 73 LMEALIISKFNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAML 132
Query: 392 -LLKVAIDVSKGMNYLHQNNIIHRDLKAANLLM 423
LL VA D++ G YL +N+ IHRD+ A N L+
Sbjct: 133 DLLHVARDIACGCQYLEENHFIHRDIAARNCLL 165
>pdb|3AOX|A Chain A, X-Ray Crystal Structure Of Human Anaplastic Lymphoma
Kinase In Complex With Ch5424802
Length = 344
Score = 72.8 bits (177), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 46/153 (30%), Positives = 77/153 (50%), Gaps = 14/153 (9%)
Query: 284 TDVWEIDPKHLKFGSKVASGSYGDLYRGTYCSQ-------DVAIKVLKPERINSDMQKEF 336
+D+ E+ K++ + G++G++Y G VA+K L PE + + +F
Sbjct: 39 SDLKEVPRKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTL-PEVCSEQDELDF 97
Query: 337 AQEVFIMRKVRHKNVVQFIGACTKPPSLCIVTEFMSGGSVYDYLHKLKGVFKLPS----- 391
E I+ K H+N+V+ IG + I+ E M+GG + +L + + PS
Sbjct: 98 LMEALIISKFNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAML 157
Query: 392 -LLKVAIDVSKGMNYLHQNNIIHRDLKAANLLM 423
LL VA D++ G YL +N+ IHRD+ A N L+
Sbjct: 158 DLLHVARDIACGCQYLEENHFIHRDIAARNCLL 190
>pdb|2PVY|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|C Chain C, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|D Chain D, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome
Length = 324
Score = 72.8 bits (177), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 45/167 (26%), Positives = 79/167 (47%), Gaps = 26/167 (15%)
Query: 287 WEIDPKHLKFGSKVASGSYGDLYRGTYCSQD---------VAIKVLKPERINSDMQKEFA 337
WE L G + G++G + D VA+K+LK + D+ +
Sbjct: 30 WEFPRDKLTLGKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLS-DLV 88
Query: 338 QEVFIMRKV-RHKNVVQFIGACTKPPSLCIVTEFMSGGSVYDYLHKLK--------GVFK 388
E+ +M+ + +HKN++ +GACT+ L ++ E+ S G++ +YL + + +
Sbjct: 89 SEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINR 148
Query: 389 LPS-------LLKVAIDVSKGMNYLHQNNIIHRDLKAANLLMDENEV 428
+P L+ +++GM YL IHRDL A N+L+ EN V
Sbjct: 149 VPEEQMTFKDLVSCTYQLARGMEYLASQKCIHRDLAARNVLVTENNV 195
>pdb|2PZP|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K526e Mutation Responsible For
Crouzon Syndrome
pdb|2PZP|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K526e Mutation Responsible For
Crouzon Syndrome
Length = 324
Score = 72.8 bits (177), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 45/167 (26%), Positives = 79/167 (47%), Gaps = 26/167 (15%)
Query: 287 WEIDPKHLKFGSKVASGSYGDLYRGTYCSQD---------VAIKVLKPERINSDMQKEFA 337
WE L G + G++G + D VA+K+LK + D+ +
Sbjct: 30 WEFPRDKLTLGKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEEDLS-DLV 88
Query: 338 QEVFIMRKV-RHKNVVQFIGACTKPPSLCIVTEFMSGGSVYDYLHKLK--------GVFK 388
E+ +M+ + +HKN++ +GACT+ L ++ E+ S G++ +YL + + +
Sbjct: 89 SEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINR 148
Query: 389 LPS-------LLKVAIDVSKGMNYLHQNNIIHRDLKAANLLMDENEV 428
+P L+ +++GM YL IHRDL A N+L+ EN V
Sbjct: 149 VPEEQMTFKDLVSCTYQLARGMEYLASQKCIHRDLAARNVLVTENNV 195
>pdb|2PZR|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K641r Mutation Responsible For
Pfeiffer Syndrome
pdb|2PZR|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K641r Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 72.8 bits (177), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 45/167 (26%), Positives = 79/167 (47%), Gaps = 26/167 (15%)
Query: 287 WEIDPKHLKFGSKVASGSYGDLYRGTYCSQD---------VAIKVLKPERINSDMQKEFA 337
WE L G + G++G + D VA+K+LK + D+ +
Sbjct: 30 WEFPRDKLTLGKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLS-DLV 88
Query: 338 QEVFIMRKV-RHKNVVQFIGACTKPPSLCIVTEFMSGGSVYDYLHKLK--------GVFK 388
E+ +M+ + +HKN++ +GACT+ L ++ E+ S G++ +YL + + +
Sbjct: 89 SEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINR 148
Query: 389 LPS-------LLKVAIDVSKGMNYLHQNNIIHRDLKAANLLMDENEV 428
+P L+ +++GM YL IHRDL A N+L+ EN V
Sbjct: 149 VPEEQMTFKDLVSCTYQLARGMEYLASQKCIHRDLAARNVLVTENNV 195
>pdb|2PWL|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549h Mutation Responsible For
Crouzon Syndrome.
pdb|2PWL|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549h Mutation Responsible For
Crouzon Syndrome
Length = 324
Score = 72.4 bits (176), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 45/167 (26%), Positives = 79/167 (47%), Gaps = 26/167 (15%)
Query: 287 WEIDPKHLKFGSKVASGSYGDLYRGTYCSQD---------VAIKVLKPERINSDMQKEFA 337
WE L G + G++G + D VA+K+LK + D+ +
Sbjct: 30 WEFPRDKLTLGKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLS-DLV 88
Query: 338 QEVFIMRKV-RHKNVVQFIGACTKPPSLCIVTEFMSGGSVYDYLHKLK--------GVFK 388
E+ +M+ + +HKN++ +GACT+ L ++ E+ S G++ +YL + + +
Sbjct: 89 SEMEMMKMIGKHKNIIHLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINR 148
Query: 389 LPS-------LLKVAIDVSKGMNYLHQNNIIHRDLKAANLLMDENEV 428
+P L+ +++GM YL IHRDL A N+L+ EN V
Sbjct: 149 VPEEQMTFKDLVSCTYQLARGMEYLASQKCIHRDLAARNVLVTENNV 195
>pdb|2PZ5|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549t Mutation Responsible For
Pfeiffer Syndrome
pdb|2PZ5|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549t Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 72.4 bits (176), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 45/167 (26%), Positives = 79/167 (47%), Gaps = 26/167 (15%)
Query: 287 WEIDPKHLKFGSKVASGSYGDLYRGTYCSQD---------VAIKVLKPERINSDMQKEFA 337
WE L G + G++G + D VA+K+LK + D+ +
Sbjct: 30 WEFPRDKLTLGKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLS-DLV 88
Query: 338 QEVFIMRKV-RHKNVVQFIGACTKPPSLCIVTEFMSGGSVYDYLHKLK--------GVFK 388
E+ +M+ + +HKN++ +GACT+ L ++ E+ S G++ +YL + + +
Sbjct: 89 SEMEMMKMIGKHKNIITLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINR 148
Query: 389 LPS-------LLKVAIDVSKGMNYLHQNNIIHRDLKAANLLMDENEV 428
+P L+ +++GM YL IHRDL A N+L+ EN V
Sbjct: 149 VPEEQMTFKDLVSCTYQLARGMEYLASQKCIHRDLAARNVLVTENNV 195
>pdb|2YJS|A Chain A, Structure Of C1156y Mutant Anaplastic Lymphoma Kinase
Length = 342
Score = 72.4 bits (176), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 46/153 (30%), Positives = 77/153 (50%), Gaps = 14/153 (9%)
Query: 284 TDVWEIDPKHLKFGSKVASGSYGDLYRGTYCSQ-------DVAIKVLKPERINSDMQKEF 336
+D+ E+ K++ + G++G++Y G VA+K L PE + + +F
Sbjct: 37 SDLKEVPRKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTL-PEVYSEQDELDF 95
Query: 337 AQEVFIMRKVRHKNVVQFIGACTKPPSLCIVTEFMSGGSVYDYLHKLKGVFKLPS----- 391
E I+ K H+N+V+ IG + I+ E M+GG + +L + + PS
Sbjct: 96 LMEALIISKFNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAML 155
Query: 392 -LLKVAIDVSKGMNYLHQNNIIHRDLKAANLLM 423
LL VA D++ G YL +N+ IHRD+ A N L+
Sbjct: 156 DLLHVARDIACGCQYLEENHFIHRDIAARNCLL 188
>pdb|2QON|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:y742a Triple Mutant
Length = 373
Score = 72.4 bits (176), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 45/146 (30%), Positives = 72/146 (49%), Gaps = 6/146 (4%)
Query: 288 EIDPKHLKFGSKVASGSYGDLYRG-----TYCSQDVAIKVLKPERINSDMQKEFAQEVFI 342
E+D ++ V +G +G++ G + VAIK LK +++F E I
Sbjct: 41 ELDATNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVG-YTEKQRRDFLGEASI 99
Query: 343 MRKVRHKNVVQFIGACTKPPSLCIVTEFMSGGSVYDYLHKLKGVFKLPSLLKVAIDVSKG 402
M + H N+++ G TK + IVTE M GS+ +L K F + L+ + ++ G
Sbjct: 100 MGQFDHPNIIRLEGVVTKSKPVMIVTEXMENGSLDSFLRKHDAQFTVIQLVGMLRGIASG 159
Query: 403 MNYLHQNNIIHRDLKAANLLMDENEV 428
M YL +HRDL A N+L++ N V
Sbjct: 160 MKYLSDMGAVHRDLAARNILINSNLV 185
>pdb|2QO7|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Dephosphorylated, Amp-Pnp Bound
pdb|2QOQ|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Base, Amp-Pnp
Bound Structure
Length = 373
Score = 72.4 bits (176), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 45/146 (30%), Positives = 72/146 (49%), Gaps = 6/146 (4%)
Query: 288 EIDPKHLKFGSKVASGSYGDLYRG-----TYCSQDVAIKVLKPERINSDMQKEFAQEVFI 342
E+D ++ V +G +G++ G + VAIK LK +++F E I
Sbjct: 41 ELDATNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVG-YTEKQRRDFLGEASI 99
Query: 343 MRKVRHKNVVQFIGACTKPPSLCIVTEFMSGGSVYDYLHKLKGVFKLPSLLKVAIDVSKG 402
M + H N+++ G TK + IVTE M GS+ +L K F + L+ + ++ G
Sbjct: 100 MGQFDHPNIIRLEGVVTKSKPVMIVTEXMENGSLDSFLRKHDAQFTVIQLVGMLRGIASG 159
Query: 403 MNYLHQNNIIHRDLKAANLLMDENEV 428
M YL +HRDL A N+L++ N V
Sbjct: 160 MKYLSDMGYVHRDLAARNILINSNLV 185
>pdb|2R2P|A Chain A, Kinase Domain Of Human Ephrin Type-A Receptor 5 (Epha5)
Length = 295
Score = 72.4 bits (176), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 46/146 (31%), Positives = 71/146 (48%), Gaps = 6/146 (4%)
Query: 288 EIDPKHLKFGSKVASGSYGDLYRGTYC-----SQDVAIKVLKPERINSDMQKEFAQEVFI 342
EI+ + + +G +G++ G VAIK LK +++F E I
Sbjct: 18 EIEASCITIERVIGAGEFGEVCSGRLKLPGKRELPVAIKTLKVG-YTEKQRRDFLGEASI 76
Query: 343 MRKVRHKNVVQFIGACTKPPSLCIVTEFMSGGSVYDYLHKLKGVFKLPSLLKVAIDVSKG 402
M + H N++ G TK + IVTE+M GS+ +L K G F + L+ + +S G
Sbjct: 77 MGQFDHPNIIHLEGVVTKSKPVMIVTEYMENGSLDTFLKKNDGQFTVIQLVGMLRGISAG 136
Query: 403 MNYLHQNNIIHRDLKAANLLMDENEV 428
M YL +HRDL A N+L++ N V
Sbjct: 137 MKYLSDMGYVHRDLAARNILINSNLV 162
>pdb|2QOB|A Chain A, Human Epha3 Kinase Domain, Base Structure
Length = 344
Score = 72.0 bits (175), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 45/146 (30%), Positives = 72/146 (49%), Gaps = 6/146 (4%)
Query: 288 EIDPKHLKFGSKVASGSYGDLYRG-----TYCSQDVAIKVLKPERINSDMQKEFAQEVFI 342
E+D ++ V +G +G++ G + VAIK LK +++F E I
Sbjct: 12 ELDATNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVG-YTEKQRRDFLGEASI 70
Query: 343 MRKVRHKNVVQFIGACTKPPSLCIVTEFMSGGSVYDYLHKLKGVFKLPSLLKVAIDVSKG 402
M + H N+++ G TK + IVTE M GS+ +L K F + L+ + ++ G
Sbjct: 71 MGQFDHPNIIRLEGVVTKSKPVMIVTEXMENGSLDSFLRKHDAQFTVIQLVGMLRGIASG 130
Query: 403 MNYLHQNNIIHRDLKAANLLMDENEV 428
M YL +HRDL A N+L++ N V
Sbjct: 131 MKYLSDMGYVHRDLAARNILINSNLV 156
>pdb|3KMU|A Chain A, Crystal Structure Of The IlkALPHA-Parvin Core Complex
(Apo)
Length = 271
Score = 72.0 bits (175), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 47/177 (26%), Positives = 86/177 (48%), Gaps = 8/177 (4%)
Query: 289 IDPKHLKFGSKVASGSYGDLYRGTYCSQDVAIKVLKPERINSDMQKEFAQEVFIMRKVRH 348
ID K L F +K+ G+L++G + D+ +KVLK ++ ++F +E +R H
Sbjct: 7 IDFKQLNFLTKLNENHSGELWKGRWQGNDIVVKVLKVRDWSTRKSRDFNEECPRLRIFSH 66
Query: 349 KNVVQFIGACTKPPS--LCIVTEFMSGGSVYDYLHKLKG-VFKLPSLLKVAIDVSKGMNY 405
NV+ +GAC PP+ ++T + GS+Y+ LH+ V +K A+D ++G +
Sbjct: 67 PNVLPVLGACQSPPAPHPTLITHWXPYGSLYNVLHEGTNFVVDQSQAVKFALDXARGXAF 126
Query: 406 LH--QNNIIHRDLKAANLLMDENEVSLLLSLCLFTVSILFCGKGRELISLFLGNDVL 460
LH + I L + ++ +DE+ + + V F GR ++ + L
Sbjct: 127 LHTLEPLIPRHALNSRSVXIDEDXTA---RISXADVKFSFQSPGRXYAPAWVAPEAL 180
>pdb|3TL8|A Chain A, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
pdb|3TL8|D Chain D, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
pdb|3TL8|G Chain G, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
pdb|3TL8|H Chain H, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
Length = 349
Score = 72.0 bits (175), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 43/134 (32%), Positives = 71/134 (52%), Gaps = 8/134 (5%)
Query: 300 VASGSYGDLYRGTYCSQD-VAIKVLKPERINSDMQKEFAQEVFIMRKVRHKNVVQFIGAC 358
+ G +G +Y+G VA+K LK ER + +F EV ++ H+N+++ G C
Sbjct: 46 LGRGGFGKVYKGRLADGTLVAVKRLKEERXQGG-ELQFQTEVEMISMAVHRNLLRLRGFC 104
Query: 359 TKPPSLCIVTEFMSGGSVYDYLHKL---KGVFKLPSLLKVAIDVSKGMNYLHQN---NII 412
P +V +M+ GSV L + + P ++A+ ++G+ YLH + II
Sbjct: 105 MTPTERLLVYPYMANGSVASCLRERPESQPPLDWPKRQRIALGSARGLAYLHDHCDPKII 164
Query: 413 HRDLKAANLLMDEN 426
HRD+KAAN+L+DE
Sbjct: 165 HRDVKAANILLDEE 178
>pdb|3UIM|A Chain A, Structural Basis For The Impact Of Phosphorylation On
Plant Receptor- Like Kinase Bak1 Activation
pdb|3ULZ|A Chain A, Crystal Structure Of Apo Bak1
Length = 326
Score = 72.0 bits (175), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 43/134 (32%), Positives = 71/134 (52%), Gaps = 8/134 (5%)
Query: 300 VASGSYGDLYRGTYCSQD-VAIKVLKPERINSDMQKEFAQEVFIMRKVRHKNVVQFIGAC 358
+ G +G +Y+G VA+K LK ER + +F EV ++ H+N+++ G C
Sbjct: 38 LGRGGFGKVYKGRLADGXLVAVKRLKEERTQGG-ELQFQTEVEMISMAVHRNLLRLRGFC 96
Query: 359 TKPPSLCIVTEFMSGGSVYDYLHKL---KGVFKLPSLLKVAIDVSKGMNYLHQN---NII 412
P +V +M+ GSV L + + P ++A+ ++G+ YLH + II
Sbjct: 97 MTPTERLLVYPYMANGSVASCLRERPESQPPLDWPKRQRIALGSARGLAYLHDHCDPKII 156
Query: 413 HRDLKAANLLMDEN 426
HRD+KAAN+L+DE
Sbjct: 157 HRDVKAANILLDEE 170
>pdb|3B2T|A Chain A, Structure Of Phosphotransferase
pdb|3B2T|B Chain B, Structure Of Phosphotransferase
Length = 311
Score = 71.6 bits (174), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 45/167 (26%), Positives = 78/167 (46%), Gaps = 26/167 (15%)
Query: 287 WEIDPKHLKFGSKVASGSYGDLYRGTYCSQD---------VAIKVLKPERINSDMQKEFA 337
WE L G + G +G + D VA+K+LK + D+ +
Sbjct: 17 WEFPRDKLTLGKPLGEGCFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLS-DLV 75
Query: 338 QEVFIMRKV-RHKNVVQFIGACTKPPSLCIVTEFMSGGSVYDYLHKLK--------GVFK 388
E+ +M+ + +HKN++ +GACT+ L ++ E+ S G++ +YL + + +
Sbjct: 76 SEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINR 135
Query: 389 LPS-------LLKVAIDVSKGMNYLHQNNIIHRDLKAANLLMDENEV 428
+P L+ +++GM YL IHRDL A N+L+ EN V
Sbjct: 136 VPEEQMTFKDLVSCTYQLARGMEYLASQKCIHRDLTARNVLVTENNV 182
>pdb|3RI1|A Chain A, Crystal Structure Of The Catalytic Domain Of Fgfr2 Kinase
In Complex With Arq 069
pdb|3RI1|B Chain B, Crystal Structure Of The Catalytic Domain Of Fgfr2 Kinase
In Complex With Arq 069
Length = 313
Score = 71.6 bits (174), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 45/167 (26%), Positives = 78/167 (46%), Gaps = 26/167 (15%)
Query: 287 WEIDPKHLKFGSKVASGSYGDLYRGTYCSQD---------VAIKVLKPERINSDMQKEFA 337
WE L G + G +G + D VA+K+LK + D+ +
Sbjct: 19 WEFPRDKLTLGKPLGEGCFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLS-DLV 77
Query: 338 QEVFIMRKV-RHKNVVQFIGACTKPPSLCIVTEFMSGGSVYDYLHKLK--------GVFK 388
E+ +M+ + +HKN++ +GACT+ L ++ E+ S G++ +YL + + +
Sbjct: 78 SEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINR 137
Query: 389 LPS-------LLKVAIDVSKGMNYLHQNNIIHRDLKAANLLMDENEV 428
+P L+ +++GM YL IHRDL A N+L+ EN V
Sbjct: 138 VPEEQMTFKDLVSCTYQLARGMEYLASQKCIHRDLAARNVLVTENNV 184
>pdb|4BBE|A Chain A, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|B Chain B, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|C Chain C, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|D Chain D, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|A Chain A, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|B Chain B, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|C Chain C, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|D Chain D, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
Length = 298
Score = 71.6 bits (174), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 45/155 (29%), Positives = 81/155 (52%), Gaps = 11/155 (7%)
Query: 285 DVWEIDPKHLKFGSKVASGSYGDLYRGTY------CSQDVAIKVLKPERINSDMQKEFAQ 338
D + + +HLKF ++ G++G + Y + VA+K L + + ++F +
Sbjct: 4 DPTQFEERHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKL--QHSTEEHLRDFER 61
Query: 339 EVFIMRKVRHKNVVQFIGACTKPP--SLCIVTEFMSGGSVYDYLHKLKGVFKLPSLLKVA 396
E+ I++ ++H N+V++ G C +L ++ E++ GS+ DYL K K LL+
Sbjct: 62 EIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYT 121
Query: 397 IDVSKGMNYLHQNNIIHRDLKAANLLMD-ENEVSL 430
+ KGM YL IHR+L N+L++ EN V +
Sbjct: 122 SQICKGMEYLGTKRYIHRNLATRNILVENENRVKI 156
>pdb|3IEC|A Chain A, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|B Chain B, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|C Chain C, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|D Chain D, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
Length = 319
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 41/129 (31%), Positives = 67/129 (51%), Gaps = 3/129 (2%)
Query: 300 VASGSYGD--LYRGTYCSQDVAIKVLKPERINSDMQKEFAQEVFIMRKVRHKNVVQFIGA 357
+ G++ L R ++VA+K++ ++NS ++ +EV IM+ + H N+V+
Sbjct: 15 IGKGNFAKVKLARHILTGKEVAVKIIDKTQLNSSSLQKLFREVRIMKVLNHPNIVKLFEV 74
Query: 358 CTKPPSLCIVTEFMSGGSVYDYLHKLKGVFKLPSLLKVAIDVSKGMNYLHQNNIIHRDLK 417
+L +V E+ SGG V+DYL G K + + Y HQ I+HRDLK
Sbjct: 75 IETEKTLYLVMEYASGGEVFDYLVA-HGWMKEKEARAKFRQIVSAVQYCHQKFIVHRDLK 133
Query: 418 AANLLMDEN 426
A NLL+D +
Sbjct: 134 AENLLLDAD 142
>pdb|1ZMW|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
T208aS212A INACTIVE DOUBLE MUTANT
pdb|1ZMW|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
T208aS212A INACTIVE DOUBLE MUTANT
Length = 327
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 41/129 (31%), Positives = 67/129 (51%), Gaps = 3/129 (2%)
Query: 300 VASGSYGD--LYRGTYCSQDVAIKVLKPERINSDMQKEFAQEVFIMRKVRHKNVVQFIGA 357
+ G++ L R ++VA+K++ ++NS ++ +EV IM+ + H N+V+
Sbjct: 22 IGKGNFAKVKLARHILTGKEVAVKIIDKTQLNSSSLQKLFREVRIMKVLNHPNIVKLFEV 81
Query: 358 CTKPPSLCIVTEFMSGGSVYDYLHKLKGVFKLPSLLKVAIDVSKGMNYLHQNNIIHRDLK 417
+L +V E+ SGG V+DYL G K + + Y HQ I+HRDLK
Sbjct: 82 IETEKTLYLVMEYASGGEVFDYLVA-HGRMKEKEARAKFRQIVSAVQYCHQKFIVHRDLK 140
Query: 418 AANLLMDEN 426
A NLL+D +
Sbjct: 141 AENLLLDAD 149
>pdb|2R0I|A Chain A, Crystal Structure Of A Kinase Mark2PAR-1 Mutant
pdb|2R0I|B Chain B, Crystal Structure Of A Kinase Mark2PAR-1 Mutant
Length = 327
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 41/129 (31%), Positives = 67/129 (51%), Gaps = 3/129 (2%)
Query: 300 VASGSYGD--LYRGTYCSQDVAIKVLKPERINSDMQKEFAQEVFIMRKVRHKNVVQFIGA 357
+ G++ L R ++VA+K++ ++NS ++ +EV IM+ + H N+V+
Sbjct: 22 IGKGNFAKVKLARHILTGKEVAVKIIDKTQLNSSSLQKLFREVRIMKVLNHPNIVKLFEV 81
Query: 358 CTKPPSLCIVTEFMSGGSVYDYLHKLKGVFKLPSLLKVAIDVSKGMNYLHQNNIIHRDLK 417
+L +V E+ SGG V+DYL G K + + Y HQ I+HRDLK
Sbjct: 82 IETEKTLYLVMEYASGGEVFDYLVA-HGRMKEKEARAKFRQIVSAVQYCHQKFIVHRDLK 140
Query: 418 AANLLMDEN 426
A NLL+D +
Sbjct: 141 AENLLLDAD 149
>pdb|1ZMU|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Wild Type
pdb|1ZMU|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Wild Type
Length = 327
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 41/129 (31%), Positives = 67/129 (51%), Gaps = 3/129 (2%)
Query: 300 VASGSYGD--LYRGTYCSQDVAIKVLKPERINSDMQKEFAQEVFIMRKVRHKNVVQFIGA 357
+ G++ L R ++VA+K++ ++NS ++ +EV IM+ + H N+V+
Sbjct: 22 IGKGNFAKVKLARHILTGKEVAVKIIDKTQLNSSSLQKLFREVRIMKVLNHPNIVKLFEV 81
Query: 358 CTKPPSLCIVTEFMSGGSVYDYLHKLKGVFKLPSLLKVAIDVSKGMNYLHQNNIIHRDLK 417
+L +V E+ SGG V+DYL G K + + Y HQ I+HRDLK
Sbjct: 82 IETEKTLYLVMEYASGGEVFDYLVA-HGRMKEKEARAKFRQIVSAVQYCHQKFIVHRDLK 140
Query: 418 AANLLMDEN 426
A NLL+D +
Sbjct: 141 AENLLLDAD 149
>pdb|2REI|A Chain A, Kinase Domain Of Human Ephrin Type-a Receptor 7 (epha7)
pdb|3DKO|A Chain A, Complex Between The Kinase Domain Of Human Ephrin Type-A
Receptor 7 (Epha7) And Inhibitor Alw-Ii-49-7
Length = 318
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 47/146 (32%), Positives = 73/146 (50%), Gaps = 6/146 (4%)
Query: 288 EIDPKHLKFGSKVASGSYGDLYRGTY---CSQDVA--IKVLKPERINSDMQKEFAQEVFI 342
E+D +K + +G +G++ G +DVA IK LK +++F E I
Sbjct: 39 ELDASCIKIERVIGAGEFGEVCSGRLKLPGKRDVAVAIKTLKVG-YTEKQRRDFLCEASI 97
Query: 343 MRKVRHKNVVQFIGACTKPPSLCIVTEFMSGGSVYDYLHKLKGVFKLPSLLKVAIDVSKG 402
M + H NVV G T+ + IV EFM G++ +L K G F + L+ + ++ G
Sbjct: 98 MGQFDHPNVVHLEGVVTRGKPVMIVIEFMENGALDAFLRKHDGQFTVIQLVGMLRGIAAG 157
Query: 403 MNYLHQNNIIHRDLKAANLLMDENEV 428
M YL +HRDL A N+L++ N V
Sbjct: 158 MRYLADMGYVHRDLAARNILVNSNLV 183
>pdb|2ITN|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Amp-Pnp
pdb|2ITO|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Iressa
pdb|2ITP|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Aee788
pdb|2ITQ|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Afn941
Length = 327
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 40/130 (30%), Positives = 71/130 (54%), Gaps = 8/130 (6%)
Query: 300 VASGSYGDLYRGTYCSQD------VAIKVLKPERINSDMQKEFAQEVFIMRKVRHKNVVQ 353
++SG++G +Y+G + + VAIK L+ E + KE E ++M V + +V +
Sbjct: 23 LSSGAFGTVYKGLWIPEGEKVKIPVAIKELR-EATSPKANKEILDEAYVMASVDNPHVCR 81
Query: 354 FIGACTKPPSLCIVTEFMSGGSVYDYLHKLKGVFKLPSLLKVAIDVSKGMNYLHQNNIIH 413
+G C ++ ++T+ M G + DY+ + K LL + ++KGMNYL ++H
Sbjct: 82 LLGICLTS-TVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLEDRRLVH 140
Query: 414 RDLKAANLLM 423
RDL A N+L+
Sbjct: 141 RDLAARNVLV 150
>pdb|2ITT|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Aee788
pdb|2ITU|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Afn941
pdb|2ITV|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Amp-pnp
pdb|2ITZ|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Iressa
Length = 327
Score = 70.9 bits (172), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 40/130 (30%), Positives = 70/130 (53%), Gaps = 8/130 (6%)
Query: 300 VASGSYGDLYRGTYCSQD------VAIKVLKPERINSDMQKEFAQEVFIMRKVRHKNVVQ 353
+ SG++G +Y+G + + VAIK L+ E + KE E ++M V + +V +
Sbjct: 23 LGSGAFGTVYKGLWIPEGEKVKIPVAIKELR-EATSPKANKEILDEAYVMASVDNPHVCR 81
Query: 354 FIGACTKPPSLCIVTEFMSGGSVYDYLHKLKGVFKLPSLLKVAIDVSKGMNYLHQNNIIH 413
+G C ++ ++T+ M G + DY+ + K LL + ++KGMNYL ++H
Sbjct: 82 LLGICLTS-TVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLEDRRLVH 140
Query: 414 RDLKAANLLM 423
RDL A N+L+
Sbjct: 141 RDLAARNVLV 150
>pdb|2J5F|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With An
Irreversible Inhibitor 34-Jab
pdb|2ITW|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Afn941
pdb|2ITX|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Amp- Pnp
pdb|2ITY|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Iressa
pdb|2J6M|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Aee788
pdb|3POZ|A Chain A, Egfr Kinase Domain Complexed With Tak-285
Length = 327
Score = 70.9 bits (172), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 40/130 (30%), Positives = 70/130 (53%), Gaps = 8/130 (6%)
Query: 300 VASGSYGDLYRGTYCSQD------VAIKVLKPERINSDMQKEFAQEVFIMRKVRHKNVVQ 353
+ SG++G +Y+G + + VAIK L+ E + KE E ++M V + +V +
Sbjct: 23 LGSGAFGTVYKGLWIPEGEKVKIPVAIKELR-EATSPKANKEILDEAYVMASVDNPHVCR 81
Query: 354 FIGACTKPPSLCIVTEFMSGGSVYDYLHKLKGVFKLPSLLKVAIDVSKGMNYLHQNNIIH 413
+G C ++ ++T+ M G + DY+ + K LL + ++KGMNYL ++H
Sbjct: 82 LLGICLTS-TVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLEDRRLVH 140
Query: 414 RDLKAANLLM 423
RDL A N+L+
Sbjct: 141 RDLAARNVLV 150
>pdb|2J5E|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With An
Irreversible Inhibitor 13-Jab
Length = 327
Score = 70.9 bits (172), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 40/130 (30%), Positives = 70/130 (53%), Gaps = 8/130 (6%)
Query: 300 VASGSYGDLYRGTYCSQD------VAIKVLKPERINSDMQKEFAQEVFIMRKVRHKNVVQ 353
+ SG++G +Y+G + + VAIK L+ E + KE E ++M V + +V +
Sbjct: 23 LGSGAFGTVYKGLWIPEGEKVKIPVAIKELR-EATSPKANKEILDEAYVMASVDNPHVCR 81
Query: 354 FIGACTKPPSLCIVTEFMSGGSVYDYLHKLKGVFKLPSLLKVAIDVSKGMNYLHQNNIIH 413
+G C ++ ++T+ M G + DY+ + K LL + ++KGMNYL ++H
Sbjct: 82 LLGICLTS-TVQLITQLMPFGXLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLEDRRLVH 140
Query: 414 RDLKAANLLM 423
RDL A N+L+
Sbjct: 141 RDLAARNVLV 150
>pdb|1XKK|A Chain A, Egfr Kinase Domain Complexed With A Quinazoline Inhibitor-
Gw572016
Length = 352
Score = 70.9 bits (172), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 40/130 (30%), Positives = 70/130 (53%), Gaps = 8/130 (6%)
Query: 300 VASGSYGDLYRGTYCSQD------VAIKVLKPERINSDMQKEFAQEVFIMRKVRHKNVVQ 353
+ SG++G +Y+G + + VAIK L+ E + KE E ++M V + +V +
Sbjct: 48 LGSGAFGTVYKGLWIPEGEKVKIPVAIKELR-EATSPKANKEILDEAYVMASVDNPHVCR 106
Query: 354 FIGACTKPPSLCIVTEFMSGGSVYDYLHKLKGVFKLPSLLKVAIDVSKGMNYLHQNNIIH 413
+G C ++ ++T+ M G + DY+ + K LL + ++KGMNYL ++H
Sbjct: 107 LLGICLTS-TVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLEDRRLVH 165
Query: 414 RDLKAANLLM 423
RDL A N+L+
Sbjct: 166 RDLAARNVLV 175
>pdb|2EB2|A Chain A, Crystal Structure Of Mutated Egfr Kinase Domain (G719s)
Length = 334
Score = 70.9 bits (172), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 40/130 (30%), Positives = 71/130 (54%), Gaps = 8/130 (6%)
Query: 300 VASGSYGDLYRGTYCSQD------VAIKVLKPERINSDMQKEFAQEVFIMRKVRHKNVVQ 353
++SG++G +Y+G + + VAIK L+ E + KE E ++M V + +V +
Sbjct: 30 LSSGAFGTVYKGLWIPEGEKVKIPVAIKELR-EATSPKANKEILDEAYVMASVDNPHVCR 88
Query: 354 FIGACTKPPSLCIVTEFMSGGSVYDYLHKLKGVFKLPSLLKVAIDVSKGMNYLHQNNIIH 413
+G C ++ ++T+ M G + DY+ + K LL + ++KGMNYL ++H
Sbjct: 89 LLGICLTS-TVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLEDRRLVH 147
Query: 414 RDLKAANLLM 423
RDL A N+L+
Sbjct: 148 RDLAARNVLV 157
>pdb|4I20|A Chain A, Crystal Structure Of Monomeric (v948r) Primary Oncogenic
Mutant L858r Egfr Kinase Domain
Length = 329
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 40/130 (30%), Positives = 70/130 (53%), Gaps = 8/130 (6%)
Query: 300 VASGSYGDLYRGTYCSQD------VAIKVLKPERINSDMQKEFAQEVFIMRKVRHKNVVQ 353
+ SG++G +Y+G + + VAIK L+ E + KE E ++M V + +V +
Sbjct: 25 LGSGAFGTVYKGLWIPEGEKVKIPVAIKELR-EATSPKANKEILDEAYVMASVDNPHVCR 83
Query: 354 FIGACTKPPSLCIVTEFMSGGSVYDYLHKLKGVFKLPSLLKVAIDVSKGMNYLHQNNIIH 413
+G C ++ ++T+ M G + DY+ + K LL + ++KGMNYL ++H
Sbjct: 84 LLGICLTS-TVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLEDRRLVH 142
Query: 414 RDLKAANLLM 423
RDL A N+L+
Sbjct: 143 RDLAARNVLV 152
>pdb|2GS7|A Chain A, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|2GS7|B Chain B, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|A Chain A, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|B Chain B, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|C Chain C, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|D Chain D, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
Length = 330
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 40/130 (30%), Positives = 70/130 (53%), Gaps = 8/130 (6%)
Query: 300 VASGSYGDLYRGTYCSQD------VAIKVLKPERINSDMQKEFAQEVFIMRKVRHKNVVQ 353
+ SG++G +Y+G + + VAIK L+ E + KE E ++M V + +V +
Sbjct: 26 LGSGAFGTVYKGLWIPEGEKVKIPVAIKELR-EATSPKANKEILDEAYVMASVDNPHVCR 84
Query: 354 FIGACTKPPSLCIVTEFMSGGSVYDYLHKLKGVFKLPSLLKVAIDVSKGMNYLHQNNIIH 413
+G C ++ ++T+ M G + DY+ + K LL + ++KGMNYL ++H
Sbjct: 85 LLGICLTS-TVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLEDRRLVH 143
Query: 414 RDLKAANLLM 423
RDL A N+L+
Sbjct: 144 RDLAARNVLV 153
>pdb|4I23|A Chain A, Crystal Structure Of The Wild-type Egfr Kinase Domain In
Complex With Dacomitinib (soaked)
Length = 329
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 40/130 (30%), Positives = 70/130 (53%), Gaps = 8/130 (6%)
Query: 300 VASGSYGDLYRGTYCSQD------VAIKVLKPERINSDMQKEFAQEVFIMRKVRHKNVVQ 353
+ SG++G +Y+G + + VAIK L+ E + KE E ++M V + +V +
Sbjct: 25 LGSGAFGTVYKGLWIPEGEKVKIPVAIKELR-EATSPKANKEILDEAYVMASVDNPHVCR 83
Query: 354 FIGACTKPPSLCIVTEFMSGGSVYDYLHKLKGVFKLPSLLKVAIDVSKGMNYLHQNNIIH 413
+G C ++ ++T+ M G + DY+ + K LL + ++KGMNYL ++H
Sbjct: 84 LLGICLTS-TVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLEDRRLVH 142
Query: 414 RDLKAANLLM 423
RDL A N+L+
Sbjct: 143 RDLAARNVLV 152
>pdb|1M14|A Chain A, Tyrosine Kinase Domain From Epidermal Growth Factor
Receptor
pdb|1M17|A Chain A, Epidermal Growth Factor Receptor Tyrosine Kinase Domain
With 4-Anilinoquinazoline Inhibitor Erlotinib
Length = 333
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 40/130 (30%), Positives = 70/130 (53%), Gaps = 8/130 (6%)
Query: 300 VASGSYGDLYRGTYCSQD------VAIKVLKPERINSDMQKEFAQEVFIMRKVRHKNVVQ 353
+ SG++G +Y+G + + VAIK L+ E + KE E ++M V + +V +
Sbjct: 29 LGSGAFGTVYKGLWIPEGEKVKIPVAIKELR-EATSPKANKEILDEAYVMASVDNPHVCR 87
Query: 354 FIGACTKPPSLCIVTEFMSGGSVYDYLHKLKGVFKLPSLLKVAIDVSKGMNYLHQNNIIH 413
+G C ++ ++T+ M G + DY+ + K LL + ++KGMNYL ++H
Sbjct: 88 LLGICLTS-TVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLEDRRLVH 146
Query: 414 RDLKAANLLM 423
RDL A N+L+
Sbjct: 147 RDLAARNVLV 156
>pdb|4HJO|A Chain A, Crystal Structure Of The Inactive Egfr Tyrosine Kinase
Domain With Erlotinib
Length = 337
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 40/130 (30%), Positives = 70/130 (53%), Gaps = 8/130 (6%)
Query: 300 VASGSYGDLYRGTYCSQD------VAIKVLKPERINSDMQKEFAQEVFIMRKVRHKNVVQ 353
+ SG++G +Y+G + + VAIK L+ E + KE E ++M V + +V +
Sbjct: 33 LGSGAFGTVYKGLWIPEGEKVKIPVAIKELR-EATSPKANKEILDEAYVMASVDNPHVCR 91
Query: 354 FIGACTKPPSLCIVTEFMSGGSVYDYLHKLKGVFKLPSLLKVAIDVSKGMNYLHQNNIIH 413
+G C ++ ++T+ M G + DY+ + K LL + ++KGMNYL ++H
Sbjct: 92 LLGICLTS-TVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLEDRRLVH 150
Query: 414 RDLKAANLLM 423
RDL A N+L+
Sbjct: 151 RDLAARNVLV 160
>pdb|4G5J|A Chain A, Crystal Structure Of Egfr Kinase In Complex With Bibw2992
Length = 330
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 40/130 (30%), Positives = 70/130 (53%), Gaps = 8/130 (6%)
Query: 300 VASGSYGDLYRGTYCSQD------VAIKVLKPERINSDMQKEFAQEVFIMRKVRHKNVVQ 353
+ SG++G +Y+G + + VAIK L+ E + KE E ++M V + +V +
Sbjct: 26 LGSGAFGTVYKGLWIPEGEKVKIPVAIKELR-EATSPKANKEILDEAYVMASVDNPHVCR 84
Query: 354 FIGACTKPPSLCIVTEFMSGGSVYDYLHKLKGVFKLPSLLKVAIDVSKGMNYLHQNNIIH 413
+G C ++ ++T+ M G + DY+ + K LL + ++KGMNYL ++H
Sbjct: 85 LLGICLTS-TVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLEDRRLVH 143
Query: 414 RDLKAANLLM 423
RDL A N+L+
Sbjct: 144 RDLAARNVLV 153
>pdb|2GS2|A Chain A, Crystal Structure Of The Active Egfr Kinase Domain
pdb|2GS6|A Chain A, Crystal Structure Of The Active Egfr Kinase Domain In
Complex With An Atp Analog-Peptide Conjugate
pdb|2RF9|A Chain A, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RF9|B Chain B, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|3W2S|A Chain A, Egfr Kinase Domain With Compound4
Length = 330
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 40/130 (30%), Positives = 70/130 (53%), Gaps = 8/130 (6%)
Query: 300 VASGSYGDLYRGTYCSQD------VAIKVLKPERINSDMQKEFAQEVFIMRKVRHKNVVQ 353
+ SG++G +Y+G + + VAIK L+ E + KE E ++M V + +V +
Sbjct: 26 LGSGAFGTVYKGLWIPEGEKVKIPVAIKELR-EATSPKANKEILDEAYVMASVDNPHVCR 84
Query: 354 FIGACTKPPSLCIVTEFMSGGSVYDYLHKLKGVFKLPSLLKVAIDVSKGMNYLHQNNIIH 413
+G C ++ ++T+ M G + DY+ + K LL + ++KGMNYL ++H
Sbjct: 85 LLGICLTS-TVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLEDRRLVH 143
Query: 414 RDLKAANLLM 423
RDL A N+L+
Sbjct: 144 RDLAARNVLV 153
>pdb|3LIJ|A Chain A, Crystal Structure Of Full Length Cpcdpk3 (Cgd5_820) In
Complex With Ca2+ And Amppnp
Length = 494
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 42/148 (28%), Positives = 79/148 (53%), Gaps = 5/148 (3%)
Query: 299 KVASGSYGD--LYRGTYCSQDVAIKVLKPERINSDMQKEFAQEVFIMRKVRHKNVVQFIG 356
K+ SG+YG+ L R + AIK+++ +++ + +EV +++ + H N+++
Sbjct: 44 KLGSGAYGEVLLCRDKVTHVERAIKIIRKTSVSTSSNSKLLEEVAVLKLLDHPNIMKLYD 103
Query: 357 ACTKPPSLCIVTEFMSGGSVYD-YLHKLKGVFKLPSLLKVAIDVSKGMNYLHQNNIIHRD 415
+ +V E GG ++D +H++K F + V G+ YLH++NI+HRD
Sbjct: 104 FFEDKRNYYLVMECYKGGELFDEIIHRMK--FNEVDAAVIIKQVLSGVTYLHKHNIVHRD 161
Query: 416 LKAANLLMDENEVSLLLSLCLFTVSILF 443
LK NLL++ E L+ + F +S +F
Sbjct: 162 LKPENLLLESKEKDALIKIVDFGLSAVF 189
>pdb|2VWI|A Chain A, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|B Chain B, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|C Chain C, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|D Chain D, Structure Of The Osr1 Kinase, A Hypertension Drug Target
Length = 303
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 43/150 (28%), Positives = 76/150 (50%), Gaps = 12/150 (8%)
Query: 287 WEIDPKHLKFGSKVASGSYGDLYRGTYCS---QDVAIKVLKPERINSDMQKEFAQEVFIM 343
W I+ + + SG+ + + YC+ + VAIK + E+ + M E +E+ M
Sbjct: 10 WSINRDDYELQEVIGSGATA-VVQAAYCAPKKEKVAIKRINLEKCQTSMD-ELLKEIQAM 67
Query: 344 RKVRHKNVVQFIGACTKPPSLCIVTEFMSGGSVYDYLHKL-------KGVFKLPSLLKVA 396
+ H N+V + + L +V + +SGGSV D + + GV ++ +
Sbjct: 68 SQCHHPNIVSYYTSFVVKDELWLVMKLLSGGSVLDIIKHIVAKGEHKSGVLDESTIATIL 127
Query: 397 IDVSKGMNYLHQNNIIHRDLKAANLLMDEN 426
+V +G+ YLH+N IHRD+KA N+L+ E+
Sbjct: 128 REVLEGLEYLHKNGQIHRDVKAGNILLGED 157
>pdb|3VJO|A Chain A, Crystal Structure Of The Wild-Type Egfr Kinase Domain In
Complex With Amppnp
Length = 334
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 40/130 (30%), Positives = 70/130 (53%), Gaps = 8/130 (6%)
Query: 300 VASGSYGDLYRGTYCSQD------VAIKVLKPERINSDMQKEFAQEVFIMRKVRHKNVVQ 353
+ SG++G +Y+G + + VAIK L+ E + KE E ++M V + +V +
Sbjct: 30 LGSGAFGTVYKGLWIPEGEKVKIPVAIKELR-EATSPKANKEILDEAYVMASVDNPHVCR 88
Query: 354 FIGACTKPPSLCIVTEFMSGGSVYDYLHKLKGVFKLPSLLKVAIDVSKGMNYLHQNNIIH 413
+G C ++ ++T+ M G + DY+ + K LL + ++KGMNYL ++H
Sbjct: 89 LLGICLTS-TVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLEDRRLVH 147
Query: 414 RDLKAANLLM 423
RDL A N+L+
Sbjct: 148 RDLAARNVLV 157
>pdb|2EB3|A Chain A, Crystal Structure Of Mutated Egfr Kinase Domain (L858r) In
Complex With Amppnp
Length = 334
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 40/130 (30%), Positives = 70/130 (53%), Gaps = 8/130 (6%)
Query: 300 VASGSYGDLYRGTYCSQD------VAIKVLKPERINSDMQKEFAQEVFIMRKVRHKNVVQ 353
+ SG++G +Y+G + + VAIK L+ E + KE E ++M V + +V +
Sbjct: 30 LGSGAFGTVYKGLWIPEGEKVKIPVAIKELR-EATSPKANKEILDEAYVMASVDNPHVCR 88
Query: 354 FIGACTKPPSLCIVTEFMSGGSVYDYLHKLKGVFKLPSLLKVAIDVSKGMNYLHQNNIIH 413
+G C ++ ++T+ M G + DY+ + K LL + ++KGMNYL ++H
Sbjct: 89 LLGICLTS-TVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLEDRRLVH 147
Query: 414 RDLKAANLLM 423
RDL A N+L+
Sbjct: 148 RDLAARNVLV 157
>pdb|3BEL|A Chain A, X-Ray Structure Of Egfr In Complex With Oxime Inhibitor
pdb|2RGP|A Chain A, Structure Of Egfr In Complex With Hydrazone, A Potent Dual
Inhibitor
Length = 315
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 40/130 (30%), Positives = 70/130 (53%), Gaps = 8/130 (6%)
Query: 300 VASGSYGDLYRGTYCSQD------VAIKVLKPERINSDMQKEFAQEVFIMRKVRHKNVVQ 353
+ SG++G +Y+G + + VAIK L+ E + KE E ++M V + +V +
Sbjct: 17 LGSGAFGTVYKGLWIPEGEKVKIPVAIKELR-EATSPKANKEILDEAYVMASVDNPHVCR 75
Query: 354 FIGACTKPPSLCIVTEFMSGGSVYDYLHKLKGVFKLPSLLKVAIDVSKGMNYLHQNNIIH 413
+G C ++ ++T+ M G + DY+ + K LL + ++KGMNYL ++H
Sbjct: 76 LLGICLTS-TVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLEDRRLVH 134
Query: 414 RDLKAANLLM 423
RDL A N+L+
Sbjct: 135 RDLAARNVLV 144
>pdb|3DAK|A Chain A, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|B Chain B, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|C Chain C, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|D Chain D, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
Length = 290
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 43/150 (28%), Positives = 76/150 (50%), Gaps = 12/150 (8%)
Query: 287 WEIDPKHLKFGSKVASGSYGDLYRGTYCS---QDVAIKVLKPERINSDMQKEFAQEVFIM 343
W I+ + + SG+ + + YC+ + VAIK + E+ + M E +E+ M
Sbjct: 5 WSINRDDYELQEVIGSGATA-VVQAAYCAPKKEKVAIKRINLEKCQTSMD-ELLKEIQAM 62
Query: 344 RKVRHKNVVQFIGACTKPPSLCIVTEFMSGGSVYDYLHKL-------KGVFKLPSLLKVA 396
+ H N+V + + L +V + +SGGSV D + + GV ++ +
Sbjct: 63 SQCHHPNIVSYYTSFVVKDELWLVMKLLSGGSVLDIIKHIVAKGEHKSGVLDESTIATIL 122
Query: 397 IDVSKGMNYLHQNNIIHRDLKAANLLMDEN 426
+V +G+ YLH+N IHRD+KA N+L+ E+
Sbjct: 123 REVLEGLEYLHKNGQIHRDVKAGNILLGED 152
>pdb|2WZJ|A Chain A, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|B Chain B, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|C Chain C, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|D Chain D, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|E Chain E, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|F Chain F, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
Length = 327
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 40/127 (31%), Positives = 66/127 (51%), Gaps = 3/127 (2%)
Query: 300 VASGSYGD--LYRGTYCSQDVAIKVLKPERINSDMQKEFAQEVFIMRKVRHKNVVQFIGA 357
+ G++ L R ++VA++++ ++NS ++ +EV IM+ + H N+V+
Sbjct: 22 IGKGNFAKVKLARHILTGKEVAVRIIDKTQLNSSSLQKLFREVRIMKVLNHPNIVKLFEV 81
Query: 358 CTKPPSLCIVTEFMSGGSVYDYLHKLKGVFKLPSLLKVAIDVSKGMNYLHQNNIIHRDLK 417
+L +V E+ SGG V+DYL G K + + Y HQ I+HRDLK
Sbjct: 82 IETEKTLYLVMEYASGGEVFDYLVA-HGRMKEKEARAKFRQIVSAVQYCHQKFIVHRDLK 140
Query: 418 AANLLMD 424
A NLL+D
Sbjct: 141 AENLLLD 147
>pdb|3LZB|A Chain A, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|B Chain B, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|C Chain C, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|D Chain D, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|E Chain E, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|F Chain F, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|G Chain G, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|H Chain H, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
Length = 327
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 40/130 (30%), Positives = 70/130 (53%), Gaps = 8/130 (6%)
Query: 300 VASGSYGDLYRGTYCSQD------VAIKVLKPERINSDMQKEFAQEVFIMRKVRHKNVVQ 353
+ SG++G +Y+G + + VAIK L+ E + KE E ++M V + +V +
Sbjct: 23 LGSGAFGTVYKGLWIPEGEKVKIPVAIKELR-EATSPKANKEILDEAYVMASVDNPHVCR 81
Query: 354 FIGACTKPPSLCIVTEFMSGGSVYDYLHKLKGVFKLPSLLKVAIDVSKGMNYLHQNNIIH 413
+G C ++ ++T+ M G + DY+ + K LL + ++KGMNYL ++H
Sbjct: 82 LLGICLTS-TVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLEDRRLVH 140
Query: 414 RDLKAANLLM 423
RDL A N+L+
Sbjct: 141 RDLAARNVLV 150
>pdb|1ZMV|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
K82r Mutant
pdb|1ZMV|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
K82r Mutant
Length = 327
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 40/129 (31%), Positives = 67/129 (51%), Gaps = 3/129 (2%)
Query: 300 VASGSYGD--LYRGTYCSQDVAIKVLKPERINSDMQKEFAQEVFIMRKVRHKNVVQFIGA 357
+ G++ L R ++VA++++ ++NS ++ +EV IM+ + H N+V+
Sbjct: 22 IGKGNFAKVKLARHILTGKEVAVRIIDKTQLNSSSLQKLFREVRIMKVLNHPNIVKLFEV 81
Query: 358 CTKPPSLCIVTEFMSGGSVYDYLHKLKGVFKLPSLLKVAIDVSKGMNYLHQNNIIHRDLK 417
+L +V E+ SGG V+DYL G K + + Y HQ I+HRDLK
Sbjct: 82 IETEKTLYLVMEYASGGEVFDYLVA-HGRMKEKEARAKFRQIVSAVQYCHQKFIVHRDLK 140
Query: 418 AANLLMDEN 426
A NLL+D +
Sbjct: 141 AENLLLDAD 149
>pdb|2QNJ|A Chain A, Kinase And Ubiquitin-Associated Domains Of Mark3PAR-1
pdb|2QNJ|B Chain B, Kinase And Ubiquitin-Associated Domains Of Mark3PAR-1
Length = 328
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 40/129 (31%), Positives = 66/129 (51%), Gaps = 3/129 (2%)
Query: 300 VASGSYGD--LYRGTYCSQDVAIKVLKPERINSDMQKEFAQEVFIMRKVRHKNVVQFIGA 357
+ G++ L R ++VAIK++ ++N ++ +EV IM+ + H N+V+
Sbjct: 20 IGKGNFAKVKLARHILTGREVAIKIIDKTQLNPTSLQKLFREVRIMKILNHPNIVKLFEV 79
Query: 358 CTKPPSLCIVTEFMSGGSVYDYLHKLKGVFKLPSLLKVAIDVSKGMNYLHQNNIIHRDLK 417
+L ++ E+ SGG V+DYL G K + + Y HQ I+HRDLK
Sbjct: 80 IETEKTLYLIMEYASGGEVFDYLVA-HGRMKEKEARSKFRQIVSAVQYCHQKRIVHRDLK 138
Query: 418 AANLLMDEN 426
A NLL+D +
Sbjct: 139 AENLLLDAD 147
>pdb|3KUL|A Chain A, Kinase Domain Of Human Ephrin Type-A Receptor 8 (Epha8)
Length = 325
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 47/146 (32%), Positives = 70/146 (47%), Gaps = 6/146 (4%)
Query: 288 EIDPKHLKFGSKVASGSYGDLYRGTY---CSQDV--AIKVLKPERINSDMQKEFAQEVFI 342
EI+ + + SG G++ G +DV AIK LK +++F E I
Sbjct: 45 EIEASRIHIEKIIGSGDSGEVCYGRLRVPGQRDVPVAIKALKAG-YTERQRRDFLSEASI 103
Query: 343 MRKVRHKNVVQFIGACTKPPSLCIVTEFMSGGSVYDYLHKLKGVFKLPSLLKVAIDVSKG 402
M + H N+++ G T+ IVTE+M GS+ +L G F + L+ + V G
Sbjct: 104 MGQFDHPNIIRLEGVVTRGRLAMIVTEYMENGSLDTFLRTHDGQFTIMQLVGMLRGVGAG 163
Query: 403 MNYLHQNNIIHRDLKAANLLMDENEV 428
M YL +HRDL A N+L+D N V
Sbjct: 164 MRYLSDLGYVHRDLAARNVLVDSNLV 189
>pdb|2Q0B|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565a Mutation Responsible For
Pfeiffer Syndrome
pdb|2Q0B|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565a Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 44/167 (26%), Positives = 78/167 (46%), Gaps = 26/167 (15%)
Query: 287 WEIDPKHLKFGSKVASGSYGDLYRGTYCSQD---------VAIKVLKPERINSDMQKEFA 337
WE L G + G++G + D VA+K+LK + D+ +
Sbjct: 30 WEFPRDKLTLGKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLS-DLV 88
Query: 338 QEVFIMRKV-RHKNVVQFIGACTKPPSLCIVTEFMSGGSVYDYLHKLK--------GVFK 388
E+ +M+ + +HKN++ +GACT+ L ++ + S G++ +YL + + +
Sbjct: 89 SEMEMMKMIGKHKNIINLLGACTQDGPLYVIVAYASKGNLREYLRARRPPGMEYSYDINR 148
Query: 389 LPS-------LLKVAIDVSKGMNYLHQNNIIHRDLKAANLLMDENEV 428
+P L+ +++GM YL IHRDL A N+L+ EN V
Sbjct: 149 VPEEQMTFKDLVSCTYQLARGMEYLASQKCIHRDLAARNVLVTENNV 195
>pdb|2OGV|A Chain A, Crystal Structure Of The Autoinhibited Human C-Fms Kinase
Domain
Length = 317
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 44/160 (27%), Positives = 80/160 (50%), Gaps = 18/160 (11%)
Query: 287 WEIDPKHLKFGSKVASGSYGDLYRGTY-------CSQDVAIKVLKPERINSDMQKEFAQE 339
WE +L+FG + +G++G + T VA+K+LK ++D ++ E
Sbjct: 33 WEFPRNNLQFGKTLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLK-STAHADEKEALMSE 91
Query: 340 VFIMRKV-RHKNVVQFIGACTKPPSLCIVTEFMSGGSVYDYLHKLKGV---------FKL 389
+ IM + +H+N+V +GACT + ++TE+ G + ++L + +L
Sbjct: 92 LKIMSHLGQHENIVNLLGACTHGGPVLVITEYCCYGDLLNFLRRKAEADLDKEDGRPLEL 151
Query: 390 PSLLKVAIDVSKGMNYLHQNNIIHRDLKAANLLMDENEVS 429
LL + V++GM +L N IHRD+ A N+L+ V+
Sbjct: 152 RDLLHFSSQVAQGMAFLASKNCIHRDVAARNVLLTNGHVA 191
>pdb|3KUL|B Chain B, Kinase Domain Of Human Ephrin Type-A Receptor 8 (Epha8)
Length = 325
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 47/146 (32%), Positives = 70/146 (47%), Gaps = 6/146 (4%)
Query: 288 EIDPKHLKFGSKVASGSYGDLYRGTY---CSQDV--AIKVLKPERINSDMQKEFAQEVFI 342
EI+ + + SG G++ G +DV AIK LK +++F E I
Sbjct: 45 EIEASRIHIEKIIGSGDSGEVCYGRLRVPGQRDVPVAIKALKAG-YTERQRRDFLSEASI 103
Query: 343 MRKVRHKNVVQFIGACTKPPSLCIVTEFMSGGSVYDYLHKLKGVFKLPSLLKVAIDVSKG 402
M + H N+++ G T+ IVTE+M GS+ +L G F + L+ + V G
Sbjct: 104 MGQFDHPNIIRLEGVVTRGRLAMIVTEYMENGSLDTFLRTHDGQFTIMQLVGMLRGVGAG 163
Query: 403 MNYLHQNNIIHRDLKAANLLMDENEV 428
M YL +HRDL A N+L+D N V
Sbjct: 164 MRYLSDLGYVHRDLAARNVLVDSNLV 189
>pdb|3LCD|A Chain A, Inhibitor Bound To A Dfg-In Structure Of The Kinase Domain
Of Csf-1r
Length = 329
Score = 70.1 bits (170), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 44/160 (27%), Positives = 80/160 (50%), Gaps = 18/160 (11%)
Query: 287 WEIDPKHLKFGSKVASGSYGDLYRGTY-------CSQDVAIKVLKPERINSDMQKEFAQE 339
WE +L+FG + +G++G + T VA+K+LK ++D ++ E
Sbjct: 41 WEFPRNNLQFGKTLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLK-STAHADEKEALMSE 99
Query: 340 VFIMRKV-RHKNVVQFIGACTKPPSLCIVTEFMSGGSVYDYLHKLKGV---------FKL 389
+ IM + +H+N+V +GACT + ++TE+ G + ++L + +L
Sbjct: 100 LKIMSHLGQHENIVNLLGACTHGGPVLVITEYCCYGDLLNFLRRKAEADLDKEDGRPLEL 159
Query: 390 PSLLKVAIDVSKGMNYLHQNNIIHRDLKAANLLMDENEVS 429
LL + V++GM +L N IHRD+ A N+L+ V+
Sbjct: 160 RDLLHFSSQVAQGMAFLASKNCIHRDVAARNVLLTNGHVA 199
>pdb|3FE3|A Chain A, Crystal Structure Of The Kinase Mark3PAR-1: T211a-S215a
Double Mutant
pdb|3FE3|B Chain B, Crystal Structure Of The Kinase Mark3PAR-1: T211a-S215a
Double Mutant
Length = 328
Score = 70.1 bits (170), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 40/129 (31%), Positives = 66/129 (51%), Gaps = 3/129 (2%)
Query: 300 VASGSYGD--LYRGTYCSQDVAIKVLKPERINSDMQKEFAQEVFIMRKVRHKNVVQFIGA 357
+ G++ L R ++VAIK++ ++N ++ +EV IM+ + H N+V+
Sbjct: 23 IGKGNFAKVKLARHILTGREVAIKIIDKTQLNPTSLQKLFREVRIMKILNHPNIVKLFEV 82
Query: 358 CTKPPSLCIVTEFMSGGSVYDYLHKLKGVFKLPSLLKVAIDVSKGMNYLHQNNIIHRDLK 417
+L ++ E+ SGG V+DYL G K + + Y HQ I+HRDLK
Sbjct: 83 IETEKTLYLIMEYASGGEVFDYLVA-HGRMKEKEARSKFRQIVSAVQYCHQKRIVHRDLK 141
Query: 418 AANLLMDEN 426
A NLL+D +
Sbjct: 142 AENLLLDAD 150
>pdb|2PY3|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565g Mutation Responsible For
Pfeiffer Syndrome
pdb|2PY3|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565g Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 69.7 bits (169), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 44/167 (26%), Positives = 78/167 (46%), Gaps = 26/167 (15%)
Query: 287 WEIDPKHLKFGSKVASGSYGDLYRGTYCSQD---------VAIKVLKPERINSDMQKEFA 337
WE L G + G++G + D VA+K+LK + D+ +
Sbjct: 30 WEFPRDKLTLGKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLS-DLV 88
Query: 338 QEVFIMRKV-RHKNVVQFIGACTKPPSLCIVTEFMSGGSVYDYLHKLK--------GVFK 388
E+ +M+ + +HKN++ +GACT+ L ++ + S G++ +YL + + +
Sbjct: 89 SEMEMMKMIGKHKNIINLLGACTQDGPLYVIVGYASKGNLREYLRARRPPGMEYSYDINR 148
Query: 389 LPS-------LLKVAIDVSKGMNYLHQNNIIHRDLKAANLLMDENEV 428
+P L+ +++GM YL IHRDL A N+L+ EN V
Sbjct: 149 VPEEQMTFKDLVSCTYQLARGMEYLASQKCIHRDLAARNVLVTENNV 195
>pdb|2XA4|A Chain A, Inhibitors Of Jak2 Kinase Domain
pdb|2XA4|B Chain B, Inhibitors Of Jak2 Kinase Domain
Length = 298
Score = 69.7 bits (169), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 44/155 (28%), Positives = 79/155 (50%), Gaps = 11/155 (7%)
Query: 285 DVWEIDPKHLKFGSKVASGSYGDLYRGTY------CSQDVAIKVLKPERINSDMQKEFAQ 338
D + + +HLKF ++ G++G + Y + VA+K L + + ++F +
Sbjct: 6 DPTQFEERHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKL--QHSTEEHLRDFER 63
Query: 339 EVFIMRKVRHKNVVQFIGACTKPP--SLCIVTEFMSGGSVYDYLHKLKGVFKLPSLLKVA 396
E+ I++ ++H N+V++ G C +L ++ E++ GS+ DYL LL+
Sbjct: 64 EIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQAHAERIDHIKLLQYT 123
Query: 397 IDVSKGMNYLHQNNIIHRDLKAANLLMD-ENEVSL 430
+ KGM YL IHRDL N+L++ EN V +
Sbjct: 124 SQICKGMEYLGTKRYIHRDLATRNILVENENRVKI 158
>pdb|2HAK|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|C Chain C, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|D Chain D, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|E Chain E, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|F Chain F, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|G Chain G, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|H Chain H, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
Length = 328
Score = 69.3 bits (168), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 40/127 (31%), Positives = 65/127 (51%), Gaps = 3/127 (2%)
Query: 300 VASGSYGD--LYRGTYCSQDVAIKVLKPERINSDMQKEFAQEVFIMRKVRHKNVVQFIGA 357
+ G++ L R ++VA+K++ ++N ++ +EV IM+ + H N+V+
Sbjct: 23 IGKGNFAKVKLARHVLTGREVAVKIIDKTQLNPTSLQKLFREVRIMKILNHPNIVKLFEV 82
Query: 358 CTKPPSLCIVTEFMSGGSVYDYLHKLKGVFKLPSLLKVAIDVSKGMNYLHQNNIIHRDLK 417
+L +V E+ SGG V+DYL G K + + Y HQ I+HRDLK
Sbjct: 83 IETEKTLYLVMEYASGGEVFDYLVA-HGRMKEKEARAKFRQIVSAVQYCHQKYIVHRDLK 141
Query: 418 AANLLMD 424
A NLL+D
Sbjct: 142 AENLLLD 148
>pdb|3PP0|A Chain A, Crystal Structure Of The Kinase Domain Of Human Her2
(Erbb2).
pdb|3PP0|B Chain B, Crystal Structure Of The Kinase Domain Of Human Her2
(Erbb2).
pdb|3RCD|A Chain A, Her2 Kinase Domain Complexed With Tak-285
pdb|3RCD|B Chain B, Her2 Kinase Domain Complexed With Tak-285
pdb|3RCD|C Chain C, Her2 Kinase Domain Complexed With Tak-285
pdb|3RCD|D Chain D, Her2 Kinase Domain Complexed With Tak-285
Length = 338
Score = 69.3 bits (168), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 40/130 (30%), Positives = 69/130 (53%), Gaps = 8/130 (6%)
Query: 300 VASGSYGDLYRGTYCSQD------VAIKVLKPERINSDMQKEFAQEVFIMRKVRHKNVVQ 353
+ SG++G +Y+G + VAIKVL+ E + KE E ++M V V +
Sbjct: 25 LGSGAFGTVYKGIWIPDGENVKIPVAIKVLR-ENTSPKANKEILDEAYVMAGVGSPYVSR 83
Query: 354 FIGACTKPPSLCIVTEFMSGGSVYDYLHKLKGVFKLPSLLKVAIDVSKGMNYLHQNNIIH 413
+G C ++ +VT+ M G + D++ + +G LL + ++KGM+YL ++H
Sbjct: 84 LLGICLTS-TVQLVTQLMPYGCLLDHVRENRGRLGSQDLLNWCMQIAKGMSYLEDVRLVH 142
Query: 414 RDLKAANLLM 423
RDL A N+L+
Sbjct: 143 RDLAARNVLV 152
>pdb|2P0C|A Chain A, Catalytic Domain Of The Proto-Oncogene Tyrosine-Protein
Kina
pdb|2P0C|B Chain B, Catalytic Domain Of The Proto-Oncogene Tyrosine-Protein
Kina
pdb|3BRB|A Chain A, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Tyrosine- Protein Kinase Mer In Complex
With Adp
pdb|3BRB|B Chain B, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Tyrosine- Protein Kinase Mer In Complex
With Adp
pdb|3BPR|A Chain A, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3BPR|B Chain B, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3BPR|C Chain C, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3BPR|D Chain D, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3TCP|A Chain A, Crystal Structure Of The Catalytic Domain Of The
Proto-Oncogene Tyrosine-Protein Kinase Mer In Complex
With Inhibitor Unc569
pdb|3TCP|B Chain B, Crystal Structure Of The Catalytic Domain Of The
Proto-Oncogene Tyrosine-Protein Kinase Mer In Complex
With Inhibitor Unc569
Length = 313
Score = 69.3 bits (168), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 45/153 (29%), Positives = 74/153 (48%), Gaps = 15/153 (9%)
Query: 289 IDPKHLKFGSKVASGSYGDLYRGTYCSQD-----VAIKVLKPERINSDMQKEFAQEVFIM 343
ID L G + G +G + G +D VA+K +K + + +EF E M
Sbjct: 31 IDRNLLILGKILGEGEFGSVMEGNLKQEDGTSLKVAVKTMKLDNSSQREIEEFLSEAACM 90
Query: 344 RKVRHKNVVQFIGACTKP-----PSLCIVTEFMSGGSVYDYL--HKLKGVFK---LPSLL 393
+ H NV++ +G C + P ++ FM G ++ YL +L+ K L +LL
Sbjct: 91 KDFSHPNVIRLLGVCIEMSSQGIPKPMVILPFMKYGDLHTYLLYSRLETGPKHIPLQTLL 150
Query: 394 KVAIDVSKGMNYLHQNNIIHRDLKAANLLMDEN 426
K +D++ GM YL N +HRDL A N ++ ++
Sbjct: 151 KFMVDIALGMEYLSNRNFLHRDLAARNCMLRDD 183
>pdb|2RFD|A Chain A, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFD|B Chain B, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|A Chain A, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|B Chain B, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|C Chain C, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|D Chain D, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
Length = 324
Score = 69.3 bits (168), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 39/130 (30%), Positives = 70/130 (53%), Gaps = 8/130 (6%)
Query: 300 VASGSYGDLYRGTYCSQD------VAIKVLKPERINSDMQKEFAQEVFIMRKVRHKNVVQ 353
+ SG++G +Y+G + + VAIK L+ E + KE E ++M V + +V +
Sbjct: 20 LGSGAFGTVYKGLWIPEGEKVKIPVAIKELR-EATSPKANKEILDEAYVMASVDNPHVCR 78
Query: 354 FIGACTKPPSLCIVTEFMSGGSVYDYLHKLKGVFKLPSLLKVAIDVSKGMNYLHQNNIIH 413
+G C ++ ++T+ M G + DY+ + K LL + +++GMNYL ++H
Sbjct: 79 LLGICLTS-TVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAEGMNYLEDRRLVH 137
Query: 414 RDLKAANLLM 423
RDL A N+L+
Sbjct: 138 RDLAARNVLV 147
>pdb|3COM|A Chain A, Crystal Structure Of Mst1 Kinase
pdb|3COM|B Chain B, Crystal Structure Of Mst1 Kinase
Length = 314
Score = 68.9 bits (167), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 43/128 (33%), Positives = 67/128 (52%), Gaps = 6/128 (4%)
Query: 299 KVASGSYGDLYRGTY--CSQDVAIKVLKPERINSDMQKEFAQEVFIMRKVRHKNVVQFIG 356
K+ GSYG +Y+ + Q VAIK + + SD+Q E +E+ IM++ +VV++ G
Sbjct: 36 KLGEGSYGSVYKAIHKETGQIVAIKQVP---VESDLQ-EIIKEISIMQQCDSPHVVKYYG 91
Query: 357 ACTKPPSLCIVTEFMSGGSVYDYLHKLKGVFKLPSLLKVAIDVSKGMNYLHQNNIIHRDL 416
+ K L IV E+ GSV D + + + KG+ YLH IHRD+
Sbjct: 92 SYFKNTDLWIVMEYCGAGSVSDIIRLRNKTLTEDEIATILQSTLKGLEYLHFMRKIHRDI 151
Query: 417 KAANLLMD 424
KA N+L++
Sbjct: 152 KAGNILLN 159
>pdb|1YVJ|A Chain A, Crystal Structure Of The Jak3 Kinase Domain In Complex
With A Staurosporine Analogue
Length = 290
Score = 68.9 bits (167), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 42/141 (29%), Positives = 74/141 (52%), Gaps = 10/141 (7%)
Query: 292 KHLKFGSKVASGSYG--DLYR----GTYCSQDVAIKVLKPERINSDMQKEFAQEVFIMRK 345
+HLK+ S++ G++G +L R G VA+K L + D Q++F +E+ I++
Sbjct: 7 RHLKYISQLGKGNFGSVELCRYDPLGDNTGALVAVKQL--QHSGPDQQRDFQREIQILKA 64
Query: 346 VRHKNVVQFIGACTKP--PSLCIVTEFMSGGSVYDYLHKLKGVFKLPSLLKVAIDVSKGM 403
+ +V++ G P P L +V E++ G + D+L + + LL + + KGM
Sbjct: 65 LHSDFIVKYRGVSYGPGRPELRLVMEYLPSGCLRDFLQRHRARLDASRLLLYSSQICKGM 124
Query: 404 NYLHQNNIIHRDLKAANLLMD 424
YL +HRDL A N+L++
Sbjct: 125 EYLGSRRCVHRDLAARNILVE 145
>pdb|3GGF|A Chain A, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
Mst4 In Complex With An Quinazolin
pdb|3GGF|B Chain B, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
Mst4 In Complex With An Quinazolin
Length = 301
Score = 68.9 bits (167), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 47/161 (29%), Positives = 86/161 (53%), Gaps = 10/161 (6%)
Query: 270 MKSHPYHLKIPNDGTDVWEIDPKHLKFG-SKVASGSYGDLYRG--TYCSQDVAIKVLKPE 326
M P +++P ++ DP+ L ++ GS+G++++G Q VAIK++ E
Sbjct: 2 MAHSPVAVQVPGMQNNI--ADPEELFTKLERIGKGSFGEVFKGIDNRTQQVVAIKIIDLE 59
Query: 327 RINSDMQKEFAQEVFIMRKVRHKNVVQFIGACTKPPSLCIVTEFMSGGSVYDYLHKLK-G 385
+++ QE+ ++ + V ++ G+ K L I+ E++ GGS D L
Sbjct: 60 EAEDEIEDI-QQEITVLSQCDSSYVTKYYGSYLKGSKLWIIMEYLGGGSALDLLRAGPFD 118
Query: 386 VFKLPSLLKVAIDVSKGMNYLHQNNIIHRDLKAANLLMDEN 426
F++ ++LK ++ KG++YLH IHRD+KAAN+L+ E
Sbjct: 119 EFQIATMLK---EILKGLDYLHSEKKIHRDIKAANVLLSEQ 156
>pdb|1RJB|A Chain A, Crystal Structure Of Flt3
Length = 344
Score = 68.9 bits (167), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 57/228 (25%), Positives = 101/228 (44%), Gaps = 42/228 (18%)
Query: 243 KEVLKLERQGWPSHRSSSPTSEPEDTGMKSHPYHLKIPNDGTDVWEIDPKHLKFGSKVAS 302
K+ + E Q + S +E + + Y LK WE ++L+FG + S
Sbjct: 4 KKQFRYESQLQMVQVTGSSDNEYFYVDFREYEYDLK--------WEFPRENLEFGKVLGS 55
Query: 303 GSYGDLYRGTY-------CSQDVAIKVLKPERINSDMQKEFAQEVFIMRKV-RHKNVVQF 354
G++G + T S VA+K+LK E+ +S ++ E+ +M ++ H+N+V
Sbjct: 56 GAFGKVMNATAYGISKTGVSIQVAVKMLK-EKADSSEREALMSELKMMTQLGSHENIVNL 114
Query: 355 IGACTKPPSLCIVTEFMSGGSVYDYLHKLK----------------------GVFKLPSL 392
+GACT + ++ E+ G + +YL + V L
Sbjct: 115 LGACTLSGPIYLIFEYCCYGDLLNYLRSKREKFSEDEIEYENQKRLEEEEDLNVLTFEDL 174
Query: 393 LKVAIDVSKGMNYLHQNNIIHRDLKAANLLMDENEVSLLLSLCLFTVS 440
L A V+KGM +L + +HRDL A N+L+ +V + +C F ++
Sbjct: 175 LCFAYQVAKGMEFLEFKSCVHRDLAARNVLVTHGKV---VKICDFGLA 219
>pdb|3GOP|A Chain A, Crystal Structure Of The Egf Receptor Juxtamembrane And
Kinase Domains
Length = 361
Score = 68.9 bits (167), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 39/130 (30%), Positives = 69/130 (53%), Gaps = 8/130 (6%)
Query: 300 VASGSYGDLYRGTYCSQD------VAIKVLKPERINSDMQKEFAQEVFIMRKVRHKNVVQ 353
+ SG++G +Y+G + + VAI L+ E + KE E ++M V + +V +
Sbjct: 57 LGSGAFGTVYKGLWIPEGEKVKIPVAIMELR-EATSPKANKEILDEAYVMASVDNPHVCR 115
Query: 354 FIGACTKPPSLCIVTEFMSGGSVYDYLHKLKGVFKLPSLLKVAIDVSKGMNYLHQNNIIH 413
+G C ++ ++T+ M G + DY+ + K LL + ++KGMNYL ++H
Sbjct: 116 LLGICLTS-TVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLEDRRLVH 174
Query: 414 RDLKAANLLM 423
RDL A N+L+
Sbjct: 175 RDLAARNVLV 184
>pdb|2JIT|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation
pdb|2JIT|B Chain B, Crystal Structure Of Egfr Kinase Domain T790m Mutation
Length = 327
Score = 68.9 bits (167), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 39/130 (30%), Positives = 69/130 (53%), Gaps = 8/130 (6%)
Query: 300 VASGSYGDLYRGTYCSQD------VAIKVLKPERINSDMQKEFAQEVFIMRKVRHKNVVQ 353
+ SG++G +Y+G + + VAIK L+ E + KE E ++M V + +V +
Sbjct: 23 LGSGAFGTVYKGLWIPEGEKVKIPVAIKELR-EATSPKANKEILDEAYVMASVDNPHVCR 81
Query: 354 FIGACTKPPSLCIVTEFMSGGSVYDYLHKLKGVFKLPSLLKVAIDVSKGMNYLHQNNIIH 413
+G C ++ ++ + M G + DY+ + K LL + ++KGMNYL ++H
Sbjct: 82 LLGICLTS-TVQLIMQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLEDRRLVH 140
Query: 414 RDLKAANLLM 423
RDL A N+L+
Sbjct: 141 RDLAARNVLV 150
>pdb|3IKA|A Chain A, Crystal Structure Of Egfr 696-1022 T790m Mutant Covalently
Binding To Wz4002
pdb|3IKA|B Chain B, Crystal Structure Of Egfr 696-1022 T790m Mutant Covalently
Binding To Wz4002
Length = 331
Score = 68.9 bits (167), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 39/130 (30%), Positives = 69/130 (53%), Gaps = 8/130 (6%)
Query: 300 VASGSYGDLYRGTYCSQD------VAIKVLKPERINSDMQKEFAQEVFIMRKVRHKNVVQ 353
+ SG++G +Y+G + + VAIK L+ E + KE E ++M V + +V +
Sbjct: 27 LGSGAFGTVYKGLWIPEGEKVKIPVAIKELR-EATSPKANKEILDEAYVMASVDNPHVCR 85
Query: 354 FIGACTKPPSLCIVTEFMSGGSVYDYLHKLKGVFKLPSLLKVAIDVSKGMNYLHQNNIIH 413
+G C ++ ++ + M G + DY+ + K LL + ++KGMNYL ++H
Sbjct: 86 LLGICLTS-TVQLIMQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLEDRRLVH 144
Query: 414 RDLKAANLLM 423
RDL A N+L+
Sbjct: 145 RDLAARNVLV 154
>pdb|2CLQ|A Chain A, Structure Of Mitogen-Activated Protein Kinase Kinase
Kinase 5
pdb|2CLQ|B Chain B, Structure Of Mitogen-Activated Protein Kinase Kinase
Kinase 5
Length = 295
Score = 68.9 bits (167), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 50/167 (29%), Positives = 88/167 (52%), Gaps = 8/167 (4%)
Query: 284 TDVWEIDPKHLKFGSKV--ASGSYGDLYRGTYCSQDVAIKVLK-PERINSDMQKEFAQEV 340
+D+ E D ++ + G +V G+YG +Y G S V I + + PER +S + +E+
Sbjct: 12 SDLLEYDYEYDENGDRVVLGKGTYGIVYAGRDLSNQVRIAIKEIPER-DSRYSQPLHEEI 70
Query: 341 FIMRKVRHKNVVQFIGACTKPPSLCIVTEFMSGGSVYDYLHKLKGVFK--LPSLLKVAID 398
+ + ++HKN+VQ++G+ ++ + I E + GGS+ L G K ++
Sbjct: 71 ALHKHLKHKNIVQYLGSFSENGFIKIFMEQVPGGSLSALLRSKWGPLKDNEQTIGFYTKQ 130
Query: 399 VSKGMNYLHQNNIIHRDLKAANLLMDENEVSLLLSLCLFTVSILFCG 445
+ +G+ YLH N I+HRD+K N+L+ N S +L + F S G
Sbjct: 131 ILEGLKYLHDNQIVHRDIKGDNVLI--NTYSGVLKISDFGTSKRLAG 175
>pdb|4I1Z|A Chain A, Crystal Structure Of The Monomeric (v948r) Form Of The
Gefitinib/erlotinib Resistant Egfr Kinase Domain
L858r+t790m
pdb|4I22|A Chain A, Structure Of The Monomeric (v948r)gefitinib/erlotinib
Resistant Double Mutant (l858r+t790m) Egfr Kinase Domain
Co-crystallized With Gefitinib
Length = 329
Score = 68.9 bits (167), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 39/130 (30%), Positives = 69/130 (53%), Gaps = 8/130 (6%)
Query: 300 VASGSYGDLYRGTYCSQD------VAIKVLKPERINSDMQKEFAQEVFIMRKVRHKNVVQ 353
+ SG++G +Y+G + + VAIK L+ E + KE E ++M V + +V +
Sbjct: 25 LGSGAFGTVYKGLWIPEGEKVKIPVAIKELR-EATSPKANKEILDEAYVMASVDNPHVCR 83
Query: 354 FIGACTKPPSLCIVTEFMSGGSVYDYLHKLKGVFKLPSLLKVAIDVSKGMNYLHQNNIIH 413
+G C ++ ++ + M G + DY+ + K LL + ++KGMNYL ++H
Sbjct: 84 LLGICLTS-TVQLIMQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLEDRRLVH 142
Query: 414 RDLKAANLLM 423
RDL A N+L+
Sbjct: 143 RDLAARNVLV 152
>pdb|2JIU|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Complex With Aee788
pdb|2JIU|B Chain B, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Complex With Aee788
Length = 328
Score = 68.9 bits (167), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 39/130 (30%), Positives = 69/130 (53%), Gaps = 8/130 (6%)
Query: 300 VASGSYGDLYRGTYCSQD------VAIKVLKPERINSDMQKEFAQEVFIMRKVRHKNVVQ 353
+ SG++G +Y+G + + VAIK L+ E + KE E ++M V + +V +
Sbjct: 24 LGSGAFGTVYKGLWIPEGEKVKIPVAIKELR-EATSPKANKEILDEAYVMASVDNPHVCR 82
Query: 354 FIGACTKPPSLCIVTEFMSGGSVYDYLHKLKGVFKLPSLLKVAIDVSKGMNYLHQNNIIH 413
+G C ++ ++ + M G + DY+ + K LL + ++KGMNYL ++H
Sbjct: 83 LLGICLTS-TVQLIMQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLEDRRLVH 141
Query: 414 RDLKAANLLM 423
RDL A N+L+
Sbjct: 142 RDLAARNVLV 151
>pdb|3W2O|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Tak-285
pdb|3W2P|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Compound 2
pdb|3W2Q|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Hki-272
pdb|3W2R|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Compound 4
Length = 331
Score = 68.9 bits (167), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 39/130 (30%), Positives = 69/130 (53%), Gaps = 8/130 (6%)
Query: 300 VASGSYGDLYRGTYCSQD------VAIKVLKPERINSDMQKEFAQEVFIMRKVRHKNVVQ 353
+ SG++G +Y+G + + VAIK L+ E + KE E ++M V + +V +
Sbjct: 27 LGSGAFGTVYKGLWIPEGEKVKIPVAIKELR-EATSPKANKEILDEAYVMASVDNPHVCR 85
Query: 354 FIGACTKPPSLCIVTEFMSGGSVYDYLHKLKGVFKLPSLLKVAIDVSKGMNYLHQNNIIH 413
+G C ++ ++ + M G + DY+ + K LL + ++KGMNYL ++H
Sbjct: 86 LLGICLTS-TVQLIMQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLEDRRLVH 144
Query: 414 RDLKAANLLM 423
RDL A N+L+
Sbjct: 145 RDLAARNVLV 154
>pdb|3BEA|A Chain A, Cfms Tyrosine Kinase (Tie2 Kid) In Complex With A
Pyrimidinopyridone Inhibitor
Length = 333
Score = 68.9 bits (167), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 45/164 (27%), Positives = 82/164 (50%), Gaps = 22/164 (13%)
Query: 287 WEIDPKHLKFGSKVASGSYGDLYRGTY-------CSQDVAIKVLKPERINSDMQKEFAQE 339
WE +L+FG + +G++G + T VA+K+LK ++D ++ E
Sbjct: 41 WEFPRNNLQFGKTLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLK-STAHADEKEALMSE 99
Query: 340 VFIMRKV-RHKNVVQFIGACTKPPSLCIVTEFMSGGSVYDYLHKLKGVFKL-PS------ 391
+ IM + +H+N+V +GACT + ++TE+ G + ++L + V + P+
Sbjct: 100 LKIMSHLGQHENIVNLLGACTHGGPVLVITEYCCYGDLLNFLRRKSRVLETDPAFAIANS 159
Query: 392 ------LLKVAIDVSKGMNYLHQNNIIHRDLKAANLLMDENEVS 429
LL + V++GM +L N IHRD+ A N+L+ V+
Sbjct: 160 TLSTRDLLHFSSQVAQGMAFLASKNCIHRDVAARNVLLTNGHVA 203
>pdb|2JIV|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Compex With Hki-272
pdb|2JIV|B Chain B, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Compex With Hki-272
Length = 328
Score = 68.9 bits (167), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 39/130 (30%), Positives = 69/130 (53%), Gaps = 8/130 (6%)
Query: 300 VASGSYGDLYRGTYCSQD------VAIKVLKPERINSDMQKEFAQEVFIMRKVRHKNVVQ 353
+ SG++G +Y+G + + VAIK L+ E + KE E ++M V + +V +
Sbjct: 24 LGSGAFGTVYKGLWIPEGEKVKIPVAIKELR-EATSPKANKEILDEAYVMASVDNPHVCR 82
Query: 354 FIGACTKPPSLCIVTEFMSGGSVYDYLHKLKGVFKLPSLLKVAIDVSKGMNYLHQNNIIH 413
+G C ++ ++ + M G + DY+ + K LL + ++KGMNYL ++H
Sbjct: 83 LLGICLTS-TVQLIMQLMPFGXLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLEDRRLVH 141
Query: 414 RDLKAANLLM 423
RDL A N+L+
Sbjct: 142 RDLAARNVLV 151
>pdb|4I21|A Chain A, Crystal Structure Of L858r + T790m Egfr Kinase Domain In
Complex With Mig6 Peptide
pdb|4I21|B Chain B, Crystal Structure Of L858r + T790m Egfr Kinase Domain In
Complex With Mig6 Peptide
Length = 329
Score = 68.6 bits (166), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 39/130 (30%), Positives = 69/130 (53%), Gaps = 8/130 (6%)
Query: 300 VASGSYGDLYRGTYCSQD------VAIKVLKPERINSDMQKEFAQEVFIMRKVRHKNVVQ 353
+ SG++G +Y+G + + VAIK L+ E + KE E ++M V + +V +
Sbjct: 25 LGSGAFGTVYKGLWIPEGEKVKIPVAIKELR-EATSPKANKEILDEAYVMASVDNPHVCR 83
Query: 354 FIGACTKPPSLCIVTEFMSGGSVYDYLHKLKGVFKLPSLLKVAIDVSKGMNYLHQNNIIH 413
+G C ++ ++ + M G + DY+ + K LL + ++KGMNYL ++H
Sbjct: 84 LLGICLTS-TVQLIMQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLEDRRLVH 142
Query: 414 RDLKAANLLM 423
RDL A N+L+
Sbjct: 143 RDLAARNVLV 152
>pdb|3UG1|A Chain A, Crystal Structure Of The Mutated Egfr Kinase Domain
(G719sT790M) IN The Apo Form
pdb|3UG2|A Chain A, Crystal Structure Of The Mutated Egfr Kinase Domain
(G719sT790M) IN Complex With Gefitinib
pdb|3VJN|A Chain A, Crystal Structure Of The Mutated Egfr Kinase Domain
(G719sT790M) IN Complex With Amppnp
Length = 334
Score = 68.6 bits (166), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 39/130 (30%), Positives = 70/130 (53%), Gaps = 8/130 (6%)
Query: 300 VASGSYGDLYRGTYCSQD------VAIKVLKPERINSDMQKEFAQEVFIMRKVRHKNVVQ 353
++SG++G +Y+G + + VAIK L+ E + KE E ++M V + +V +
Sbjct: 30 LSSGAFGTVYKGLWIPEGEKVKIPVAIKELR-EATSPKANKEILDEAYVMASVDNPHVCR 88
Query: 354 FIGACTKPPSLCIVTEFMSGGSVYDYLHKLKGVFKLPSLLKVAIDVSKGMNYLHQNNIIH 413
+G C ++ ++ + M G + DY+ + K LL + ++KGMNYL ++H
Sbjct: 89 LLGICLTS-TVQLIMQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLEDRRLVH 147
Query: 414 RDLKAANLLM 423
RDL A N+L+
Sbjct: 148 RDLAARNVLV 157
>pdb|2Y94|A Chain A, Structure Of An Active Form Of Mammalian Ampk
Length = 476
Score = 68.6 bits (166), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 36/135 (26%), Positives = 74/135 (54%), Gaps = 4/135 (2%)
Query: 293 HLKFGSKVASGSYGDLYRGTY--CSQDVAIKVLKPERINS-DMQKEFAQEVFIMRKVRHK 349
H G + G++G + G + VA+K+L ++I S D+ + +E+ ++ RH
Sbjct: 17 HYILGDTLGVGTFGKVKVGKHELTGHKVAVKILNRQKIRSLDVVGKIRREIQNLKLFRHP 76
Query: 350 NVVQFIGACTKPPSLCIVTEFMSGGSVYDYLHKLKGVFKLPSLLKVAIDVSKGMNYLHQN 409
++++ + P + +V E++SGG ++DY+ K G ++ + G++Y H++
Sbjct: 77 HIIKLYQVISTPSDIFMVMEYVSGGELFDYICK-NGRLDEKESRRLFQQILSGVDYCHRH 135
Query: 410 NIIHRDLKAANLLMD 424
++HRDLK N+L+D
Sbjct: 136 MVVHRDLKPENVLLD 150
>pdb|4G5P|A Chain A, Crystal Structure Of Egfr Kinase T790m In Complex With
Bibw2992
pdb|4G5P|B Chain B, Crystal Structure Of Egfr Kinase T790m In Complex With
Bibw2992
Length = 330
Score = 68.6 bits (166), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 39/130 (30%), Positives = 69/130 (53%), Gaps = 8/130 (6%)
Query: 300 VASGSYGDLYRGTYCSQD------VAIKVLKPERINSDMQKEFAQEVFIMRKVRHKNVVQ 353
+ SG++G +Y+G + + VAIK L+ E + KE E ++M V + +V +
Sbjct: 26 LGSGAFGTVYKGLWIPEGEKVKIPVAIKELR-EATSPKANKEILDEAYVMASVDNPHVCR 84
Query: 354 FIGACTKPPSLCIVTEFMSGGSVYDYLHKLKGVFKLPSLLKVAIDVSKGMNYLHQNNIIH 413
+G C ++ ++ + M G + DY+ + K LL + ++KGMNYL ++H
Sbjct: 85 LLGICLTS-TVQLIMQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLEDRRLVH 143
Query: 414 RDLKAANLLM 423
RDL A N+L+
Sbjct: 144 RDLAARNVLV 153
>pdb|4I24|A Chain A, Structure Of T790m Egfr Kinase Domain Co-crystallized With
Dacomitinib
pdb|4I24|B Chain B, Structure Of T790m Egfr Kinase Domain Co-crystallized With
Dacomitinib
Length = 329
Score = 68.6 bits (166), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 39/130 (30%), Positives = 69/130 (53%), Gaps = 8/130 (6%)
Query: 300 VASGSYGDLYRGTYCSQD------VAIKVLKPERINSDMQKEFAQEVFIMRKVRHKNVVQ 353
+ SG++G +Y+G + + VAIK L+ E + KE E ++M V + +V +
Sbjct: 25 LGSGAFGTVYKGLWIPEGEKVKIPVAIKELR-EATSPKANKEILDEAYVMASVDNPHVCR 83
Query: 354 FIGACTKPPSLCIVTEFMSGGSVYDYLHKLKGVFKLPSLLKVAIDVSKGMNYLHQNNIIH 413
+G C ++ ++ + M G + DY+ + K LL + ++KGMNYL ++H
Sbjct: 84 LLGICLTS-TVQLIMQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLEDRRLVH 142
Query: 414 RDLKAANLLM 423
RDL A N+L+
Sbjct: 143 RDLAARNVLV 152
>pdb|1Y8G|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Inactive Double Mutant With Selenomethionine
pdb|1Y8G|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Inactive Double Mutant With Selenomethionine
Length = 327
Score = 68.6 bits (166), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 40/127 (31%), Positives = 65/127 (51%), Gaps = 3/127 (2%)
Query: 300 VASGSYGD--LYRGTYCSQDVAIKVLKPERINSDMQKEFAQEVFIMRKVRHKNVVQFIGA 357
+ G++ L R ++VA+K++ ++NS ++ +EV I + + H N+V+
Sbjct: 22 IGKGNFAKVKLARHILTGKEVAVKIIDKTQLNSSSLQKLFREVRIXKVLNHPNIVKLFEV 81
Query: 358 CTKPPSLCIVTEFMSGGSVYDYLHKLKGVFKLPSLLKVAIDVSKGMNYLHQNNIIHRDLK 417
+L +V E+ SGG V+DYL G K + + Y HQ I+HRDLK
Sbjct: 82 IETEKTLYLVXEYASGGEVFDYLVA-HGRXKEKEARAKFRQIVSAVQYCHQKFIVHRDLK 140
Query: 418 AANLLMD 424
A NLL+D
Sbjct: 141 AENLLLD 147
>pdb|2XIK|A Chain A, Structure Of Human Ysk1 (Yeast Sps1-Ste20-Related Kinase
1)
Length = 294
Score = 68.6 bits (166), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 41/141 (29%), Positives = 77/141 (54%), Gaps = 6/141 (4%)
Query: 289 IDPKHLKFG-SKVASGSYGDLYRG--TYCSQDVAIKVLKPERINSDMQKEFAQEVFIMRK 345
+DP+ L ++ GS+G++Y+G + + VAIK++ E +++ QE+ ++ +
Sbjct: 15 VDPEELFTKLDRIGKGSFGEVYKGIDNHTKEVVAIKIIDLEEAEDEIEDI-QQEITVLSQ 73
Query: 346 VRHKNVVQFIGACTKPPSLCIVTEFMSGGSVYDYLHKLKGVFKLPSLLKVAIDVSKGMNY 405
+ ++ G+ K L I+ E++ GGS D L G + + + ++ KG++Y
Sbjct: 74 CDSPYITRYFGSYLKSTKLWIIMEYLGGGSALDLLKP--GPLEETYIATILREILKGLDY 131
Query: 406 LHQNNIIHRDLKAANLLMDEN 426
LH IHRD+KAAN+L+ E
Sbjct: 132 LHSERKIHRDIKAANVLLSEQ 152
>pdb|2I1M|A Chain A, Cfms Tyrosine Kinase (Tie2 Kid) In Complex With An
Arylamide Inhibitor
Length = 333
Score = 68.6 bits (166), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 45/164 (27%), Positives = 82/164 (50%), Gaps = 22/164 (13%)
Query: 287 WEIDPKHLKFGSKVASGSYGDLYRGTY-------CSQDVAIKVLKPERINSDMQKEFAQE 339
WE +L+FG + +G++G + T VA+K+LK ++D ++ E
Sbjct: 41 WEFPRNNLQFGKTLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLK-STAHADEKEALMSE 99
Query: 340 VFIMRKV-RHKNVVQFIGACTKPPSLCIVTEFMSGGSVYDYLHKLKGVFKL-PS------ 391
+ IM + +H+N+V +GACT + ++TE+ G + ++L + V + P+
Sbjct: 100 LKIMSHLGQHENIVNLLGACTHGGPVLVITEYCCYGDLLNFLRRKSRVLETDPAFAIANS 159
Query: 392 ------LLKVAIDVSKGMNYLHQNNIIHRDLKAANLLMDENEVS 429
LL + V++GM +L N IHRD+ A N+L+ V+
Sbjct: 160 TASTRDLLHFSSQVAQGMAFLASKNCIHRDVAARNVLLTNGHVA 203
>pdb|1B6C|B Chain B, Crystal Structure Of The Cytoplasmic Domain Of The Type I
Tgf-Beta Receptor In Complex With Fkbp12
pdb|1B6C|D Chain D, Crystal Structure Of The Cytoplasmic Domain Of The Type I
Tgf-Beta Receptor In Complex With Fkbp12
pdb|1B6C|F Chain F, Crystal Structure Of The Cytoplasmic Domain Of The Type I
Tgf-Beta Receptor In Complex With Fkbp12
pdb|1B6C|H Chain H, Crystal Structure Of The Cytoplasmic Domain Of The Type I
Tgf-Beta Receptor In Complex With Fkbp12
pdb|1IAS|A Chain A, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|1IAS|B Chain B, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|1IAS|C Chain C, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|1IAS|D Chain D, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|1IAS|E Chain E, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|3FAA|A Chain A, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3FAA|B Chain B, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3FAA|C Chain C, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3FAA|D Chain D, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3FAA|E Chain E, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3KCF|A Chain A, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|3KCF|B Chain B, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|3KCF|C Chain C, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|3KCF|D Chain D, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|3KCF|E Chain E, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|2X7O|A Chain A, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
pdb|2X7O|B Chain B, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
pdb|2X7O|C Chain C, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
pdb|2X7O|D Chain D, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
pdb|2X7O|E Chain E, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
Length = 342
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 45/187 (24%), Positives = 89/187 (47%), Gaps = 21/187 (11%)
Query: 266 EDTGMKSHPYHLKIPNDGTD----VWEIDPKHLKFGSKVASGSYGDLYRGTYCSQDVAIK 321
E T +K Y + G+ V + + + G +G+++RG + ++VA+K
Sbjct: 12 EGTTLKDLIYDMTTSGSGSGLPLLVQRTIARTIVLQESIGKGRFGEVWRGKWRGEEVAVK 71
Query: 322 VLKPERINSDMQKEFAQEVFIMRKVRHKNVVQFIGACTKP----PSLCIVTEFMSGGSVY 377
+ S ++ E++ +RH+N++ FI A K L +V+++ GS++
Sbjct: 72 IFSSREERSWFRE---AEIYQTVMLRHENILGFIAADNKDNGTWTQLWLVSDYHEHGSLF 128
Query: 378 DYLHKLKGVFKLPSLLKVAIDVSKGMNYLHQN--------NIIHRDLKAANLLMDENEVS 429
DYL++ + ++K+A+ + G+ +LH I HRDLK+ N+L+ +N
Sbjct: 129 DYLNRY--TVTVEGMIKLALSTASGLAHLHMEIVGTQGKPAIAHRDLKSKNILVKKNGTC 186
Query: 430 LLLSLCL 436
+ L L
Sbjct: 187 CIADLGL 193
>pdb|3PLS|A Chain A, Ron In Complex With Ligand Amp-Pnp
Length = 298
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 46/159 (28%), Positives = 74/159 (46%), Gaps = 19/159 (11%)
Query: 300 VASGSYGDLYRGTYCSQ-----DVAIKVLKPERINSDMQKE-FAQEVFIMRKVRHKNVVQ 353
+ G +G +Y G Y Q AIK L RI Q E F +E +MR + H NV+
Sbjct: 29 IGKGHFGVVYHGEYIDQAQNRIQCAIKSLS--RITEMQQVEAFLREGLLMRGLNHPNVLA 86
Query: 354 FIGACTKPPSLC-IVTEFMSGGSVYDYLHKLKGVFKLPSLLKVAIDVSKGMNYLHQNNII 412
IG P L ++ +M G + ++ + + L+ + V++GM YL + +
Sbjct: 87 LIGIMLPPEGLPHVLLPYMCHGDLLQFIRSPQRNPTVKDLISFGLQVARGMEYLAEQKFV 146
Query: 413 HRDLKAANLLMDENEVSLLLSLCLFTVSILFCGKGRELI 451
HRDL A N ++DE+ FTV + G R+++
Sbjct: 147 HRDLAARNCMLDES----------FTVKVADFGLARDIL 175
>pdb|1RW8|A Chain A, Crystal Structure Of Tgf-Beta Receptor I Kinase With Atp
Site Inhibitor
Length = 301
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 39/149 (26%), Positives = 78/149 (52%), Gaps = 17/149 (11%)
Query: 300 VASGSYGDLYRGTYCSQDVAIKVLKPERINSDMQKEFAQEVFIMRKVRHKNVVQFIGACT 359
+ G +G+++RG + ++VA+K+ S ++ E++ +RH+N++ FI A
Sbjct: 12 IGKGRFGEVWRGKWRGEEVAVKIFSSREERSWFRE---AEIYQTVMLRHENILGFIAADN 68
Query: 360 KP----PSLCIVTEFMSGGSVYDYLHKLKGVFKLPSLLKVAIDVSKGMNYLHQN------ 409
K L +V+++ GS++DYL++ + ++K+A+ + G+ +LH
Sbjct: 69 KDNGTWTQLWLVSDYHEHGSLFDYLNRY--TVTVEGMIKLALSTASGLAHLHMEIVGTQG 126
Query: 410 --NIIHRDLKAANLLMDENEVSLLLSLCL 436
I HRDLK+ N+L+ +N + L L
Sbjct: 127 KPAIAHRDLKSKNILVKKNGTCCIADLGL 155
>pdb|2WOT|A Chain A, Alk5 In Complex With 4-((5,6-Dimethyl-2-(2-Pyridyl)-3-
Pyridyl)oxy)-N-(3,4,5-Trimethoxyphenyl)pyridin-2-Amine
pdb|2WOU|A Chain A, Alk5 In Complex With
4-((4-((2,6-Dimethyl-3-Pyridyl)oxy)-2-
Pyridyl)amino)benzenesulfonamide
Length = 306
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 39/149 (26%), Positives = 78/149 (52%), Gaps = 17/149 (11%)
Query: 300 VASGSYGDLYRGTYCSQDVAIKVLKPERINSDMQKEFAQEVFIMRKVRHKNVVQFIGACT 359
+ G +G+++RG + ++VA+K+ S ++ E++ +RH+N++ FI A
Sbjct: 14 IGKGRFGEVWRGKWRGEEVAVKIFSSREERSWFRE---AEIYQTVMLRHENILGFIAADN 70
Query: 360 KP----PSLCIVTEFMSGGSVYDYLHKLKGVFKLPSLLKVAIDVSKGMNYLHQN------ 409
K L +V+++ GS++DYL++ + ++K+A+ + G+ +LH
Sbjct: 71 KDNGTWTQLWLVSDYHEHGSLFDYLNRY--TVTVEGMIKLALSTASGLAHLHMEIVGTQG 128
Query: 410 --NIIHRDLKAANLLMDENEVSLLLSLCL 436
I HRDLK+ N+L+ +N + L L
Sbjct: 129 KPAIAHRDLKSKNILVKKNGTCCIADLGL 157
>pdb|3TZM|A Chain A, Tgf-Beta Receptor Type 1 In Complex With Sb431542
Length = 309
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 39/149 (26%), Positives = 78/149 (52%), Gaps = 17/149 (11%)
Query: 300 VASGSYGDLYRGTYCSQDVAIKVLKPERINSDMQKEFAQEVFIMRKVRHKNVVQFIGACT 359
+ G +G+++RG + ++VA+K+ S ++ E++ +RH+N++ FI A
Sbjct: 17 IGKGRFGEVWRGKWRGEEVAVKIFSSREERSWFRE---AEIYQTVMLRHENILGFIAADN 73
Query: 360 KP----PSLCIVTEFMSGGSVYDYLHKLKGVFKLPSLLKVAIDVSKGMNYLHQN------ 409
K L +V+++ GS++DYL++ + ++K+A+ + G+ +LH
Sbjct: 74 KDNGTWTQLWLVSDYHEHGSLFDYLNRY--TVTVEGMIKLALSTASGLAHLHMEIVGTQG 131
Query: 410 --NIIHRDLKAANLLMDENEVSLLLSLCL 436
I HRDLK+ N+L+ +N + L L
Sbjct: 132 KPAIAHRDLKSKNILVKKNGTCCIADLGL 160
>pdb|1VJY|A Chain A, Crystal Structure Of A Naphthyridine Inhibitor Of Human
Tgf- Beta Type I Receptor
pdb|3GXL|A Chain A, Alk-5 Kinase Complex With Gw857175
pdb|3HMM|A Chain A, Structure Of Alk5 + Gw855857
Length = 303
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 39/149 (26%), Positives = 78/149 (52%), Gaps = 17/149 (11%)
Query: 300 VASGSYGDLYRGTYCSQDVAIKVLKPERINSDMQKEFAQEVFIMRKVRHKNVVQFIGACT 359
+ G +G+++RG + ++VA+K+ S ++ E++ +RH+N++ FI A
Sbjct: 11 IGKGRFGEVWRGKWRGEEVAVKIFSSREERSWFRE---AEIYQTVMLRHENILGFIAADN 67
Query: 360 KP----PSLCIVTEFMSGGSVYDYLHKLKGVFKLPSLLKVAIDVSKGMNYLHQN------ 409
K L +V+++ GS++DYL++ + ++K+A+ + G+ +LH
Sbjct: 68 KDNGTWTQLWLVSDYHEHGSLFDYLNRY--TVTVEGMIKLALSTASGLAHLHMEIVGTQG 125
Query: 410 --NIIHRDLKAANLLMDENEVSLLLSLCL 436
I HRDLK+ N+L+ +N + L L
Sbjct: 126 KPAIAHRDLKSKNILVKKNGTCCIADLGL 154
>pdb|1PY5|A Chain A, Crystal Structure Of Tgf-Beta Receptor I Kinase With
Inhibitor
Length = 326
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 39/149 (26%), Positives = 78/149 (52%), Gaps = 17/149 (11%)
Query: 300 VASGSYGDLYRGTYCSQDVAIKVLKPERINSDMQKEFAQEVFIMRKVRHKNVVQFIGACT 359
+ G +G+++RG + ++VA+K+ S ++ E++ +RH+N++ FI A
Sbjct: 37 IGKGRFGEVWRGKWRGEEVAVKIFSSREERSWFRE---AEIYQTVMLRHENILGFIAADN 93
Query: 360 KP----PSLCIVTEFMSGGSVYDYLHKLKGVFKLPSLLKVAIDVSKGMNYLHQN------ 409
K L +V+++ GS++DYL++ + ++K+A+ + G+ +LH
Sbjct: 94 KDNGTWTQLWLVSDYHEHGSLFDYLNRY--TVTVEGMIKLALSTASGLAHLHMEIVGTQG 151
Query: 410 --NIIHRDLKAANLLMDENEVSLLLSLCL 436
I HRDLK+ N+L+ +N + L L
Sbjct: 152 KPAIAHRDLKSKNILVKKNGTCCIADLGL 180
>pdb|2IVV|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain Complexed With The Inhibitor Pp1
Length = 314
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 42/170 (24%), Positives = 79/170 (46%), Gaps = 31/170 (18%)
Query: 287 WEIDPKHLKFGSKVASGSYGDL-------YRGTYCSQDVAIKVLKPERINSDMQKEFAQE 339
WE K+L G + G +G + +G VA+K+LK S++ ++ E
Sbjct: 18 WEFPRKNLVLGKTLGEGEFGKVVKATAFHLKGRAGYTTVAVKMLKENASPSEL-RDLLSE 76
Query: 340 VFIMRKVRHKNVVQFIGACTKPPSLCIVTEFMSGGSVYDYLHKLKGV------------- 386
++++V H +V++ GAC++ L ++ E+ GS+ +L + + V
Sbjct: 77 FNVLKQVNHPHVIKLYGACSQDGPLLLIVEYAKYGSLRGFLRESRKVGPGYLGSGGSRNS 136
Query: 387 ----------FKLPSLLKVAIDVSKGMNYLHQNNIIHRDLKAANLLMDEN 426
+ L+ A +S+GM YL + +++HRDL A N+L+ E
Sbjct: 137 SSLDHPDERALTMGDLISFAWQISQGMQYLAEMSLVHRDLAARNILVAEG 186
>pdb|3LXN|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
pdb|3LXP|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
Length = 318
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 45/147 (30%), Positives = 76/147 (51%), Gaps = 15/147 (10%)
Query: 292 KHLKFGSKVASGSYGDLYRGTYC--------SQDVAIKVLKPERINSDMQKEFAQEVFIM 343
++LK + G +G + YC + VA+K LK + + + QE+ I+
Sbjct: 31 RYLKKIRDLGEGHFGKV--SLYCYDPTNDGTGEMVAVKALKAD-AGPQHRSGWKQEIDIL 87
Query: 344 RKVRHKNVVQFIGAC--TKPPSLCIVTEFMSGGSVYDYLHKLKGVFKLPSLLKVAIDVSK 401
R + H++++++ G C SL +V E++ GS+ DYL + L LL A + +
Sbjct: 88 RTLYHEHIIKYKGCCEDAGAASLQLVMEYVPLGSLRDYLPRHS--IGLAQLLLFAQQICE 145
Query: 402 GMNYLHQNNIIHRDLKAANLLMDENEV 428
GM YLH + IHRDL A N+L+D + +
Sbjct: 146 GMAYLHAQHYIHRDLAARNVLLDNDRL 172
>pdb|3PJC|A Chain A, Crystal Structure Of Jak3 Complexed With A Potent Atp Site
Inhibitor Showing High Selectivity Within The Janus
Kinase Family
Length = 315
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 46/153 (30%), Positives = 78/153 (50%), Gaps = 13/153 (8%)
Query: 280 PNDGTDVWEIDPKHLKFGSKVASGSYG--DLYR----GTYCSQDVAIKVLKPERINSDMQ 333
P D T E +HLK+ S++ G++G +L R G VA+K L + D Q
Sbjct: 2 PQDPTIFEE---RHLKYISQLGKGNFGSVELCRYDPLGDNTGALVAVKQL--QHSGPDQQ 56
Query: 334 KEFAQEVFIMRKVRHKNVVQFIGACTKP--PSLCIVTEFMSGGSVYDYLHKLKGVFKLPS 391
++F +E+ I++ + +V++ G P SL +V E++ G + D+L + +
Sbjct: 57 RDFQREIQILKALHSDFIVKYRGVSYGPGRQSLRLVMEYLPSGCLRDFLQRHRARLDASR 116
Query: 392 LLKVAIDVSKGMNYLHQNNIIHRDLKAANLLMD 424
LL + + KGM YL +HRDL A N+L++
Sbjct: 117 LLLYSSQICKGMEYLGSRRCVHRDLAARNILVE 149
>pdb|4HVD|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((s)-1,2,2-trimethyl-propyl)-amide
pdb|4HVG|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((s)-2-hydroxy-1,2-dimethyl-propyl)- Amide
pdb|4HVH|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((r)-2-hydroxy-1,2-dimethyl-propyl
pdb|4HVI|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((r)-1-methyl-2-oxo-2-piperidin-1-yl- Ethyl)-amide
Length = 314
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 42/141 (29%), Positives = 74/141 (52%), Gaps = 10/141 (7%)
Query: 292 KHLKFGSKVASGSYG--DLYR----GTYCSQDVAIKVLKPERINSDMQKEFAQEVFIMRK 345
+HLK+ S++ G++G +L R G VA+K L + D Q++F +E+ I++
Sbjct: 10 RHLKYISQLGKGNFGSVELCRYDPLGDNTGALVAVKQL--QHSGPDQQRDFQREIQILKA 67
Query: 346 VRHKNVVQFIGACTKP--PSLCIVTEFMSGGSVYDYLHKLKGVFKLPSLLKVAIDVSKGM 403
+ +V++ G P SL +V E++ G + D+L + + LL + + KGM
Sbjct: 68 LHSDFIVKYRGVSYGPGRQSLRLVMEYLPSGCLRDFLQRHRARLDASRLLLYSSQICKGM 127
Query: 404 NYLHQNNIIHRDLKAANLLMD 424
YL +HRDL A N+L++
Sbjct: 128 EYLGSRRCVHRDLAARNILVE 148
>pdb|3A7F|A Chain A, Human Mst3 Kinase
pdb|3A7G|A Chain A, Human Mst3 Kinase
pdb|3A7G|B Chain B, Human Mst3 Kinase
pdb|3A7H|A Chain A, Human Mst3 Kinase In Complex With Atp
pdb|3A7H|B Chain B, Human Mst3 Kinase In Complex With Atp
pdb|3A7I|A Chain A, Human Mst3 Kinase In Complex With Adenine
pdb|3A7J|A Chain A, Human Mst3 Kinase In Complex With Mnadp
Length = 303
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 42/135 (31%), Positives = 74/135 (54%), Gaps = 6/135 (4%)
Query: 299 KVASGSYGDLYRG--TYCSQDVAIKVLKPERINSDMQKEFAQEVFIMRKVRHKNVVQFIG 356
K+ GS+G++++G + VAIK++ E +++ QE+ ++ + V ++ G
Sbjct: 29 KIGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAEDEIEDI-QQEITVLSQCDSPYVTKYYG 87
Query: 357 ACTKPPSLCIVTEFMSGGSVYDYLHKLKGVFKLPSLLKVAIDVSKGMNYLHQNNIIHRDL 416
+ K L I+ E++ GGS D L G + + ++ KG++YLH IHRD+
Sbjct: 88 SYLKDTKLWIIMEYLGGGSALDLLEP--GPLDETQIATILREILKGLDYLHSEKKIHRDI 145
Query: 417 KAANLLMDEN-EVSL 430
KAAN+L+ E+ EV L
Sbjct: 146 KAANVLLSEHGEVKL 160
>pdb|2IVT|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain
pdb|2IVU|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain Complexed With The Inhibitor Zd6474
pdb|2X2K|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2L|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2M|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2M|B Chain B, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
Length = 314
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 42/170 (24%), Positives = 78/170 (45%), Gaps = 31/170 (18%)
Query: 287 WEIDPKHLKFGSKVASGSYGDL-------YRGTYCSQDVAIKVLKPERINSDMQKEFAQE 339
WE K+L G + G +G + +G VA+K+LK S++ ++ E
Sbjct: 18 WEFPRKNLVLGKTLGEGEFGKVVKATAFHLKGRAGYTTVAVKMLKENASPSEL-RDLLSE 76
Query: 340 VFIMRKVRHKNVVQFIGACTKPPSLCIVTEFMSGGSVYDYLHKLKGV------------- 386
++++V H +V++ GAC++ L ++ E+ GS+ +L + + V
Sbjct: 77 FNVLKQVNHPHVIKLYGACSQDGPLLLIVEYAKYGSLRGFLRESRKVGPGYLGSGGSRNS 136
Query: 387 ----------FKLPSLLKVAIDVSKGMNYLHQNNIIHRDLKAANLLMDEN 426
+ L+ A +S+GM YL + ++HRDL A N+L+ E
Sbjct: 137 SSLDHPDERALTMGDLISFAWQISQGMQYLAEMKLVHRDLAARNILVAEG 186
>pdb|3LCO|A Chain A, Inhibitor Bound To A Dfg-Out Structure Of The Kinase
Domain Of Csf-1r
Length = 324
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 45/173 (26%), Positives = 80/173 (46%), Gaps = 31/173 (17%)
Query: 287 WEIDPKHLKFGSKVASGSYGDLYRGTY-------CSQDVAIKVLKPERINSDMQKEFAQE 339
WE +L+FG + +G++G + T VA+K+LK ++D ++ E
Sbjct: 26 WEFPRNNLQFGKTLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLK-STAHADEKEALMSE 84
Query: 340 VFIMRKV-RHKNVVQFIGACTKPPSLCIVTEFMSGGSVYDYLHKLKGVFKLPS------- 391
+ IM + +H+N+V +GACT + ++TE+ G + ++L + PS
Sbjct: 85 LKIMSHLGQHENIVNLLGACTHGGPVLVITEYCCYGDLLNFLRRKAEAMLGPSLAPGQDP 144
Query: 392 ---------------LLKVAIDVSKGMNYLHQNNIIHRDLKAANLLMDENEVS 429
LL + V++GM +L N IHRD+ A N+L+ V+
Sbjct: 145 EGLDKEDGRPLELRDLLHFSSQVAQGMAFLASKNCIHRDVAARNVLLTNGHVA 197
>pdb|2IVS|A Chain A, Crystal Structure Of Non-Phosphorylated Ret Tyrosine
Kinase Domain
pdb|2IVS|B Chain B, Crystal Structure Of Non-Phosphorylated Ret Tyrosine
Kinase Domain
Length = 314
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 42/170 (24%), Positives = 78/170 (45%), Gaps = 31/170 (18%)
Query: 287 WEIDPKHLKFGSKVASGSYGDL-------YRGTYCSQDVAIKVLKPERINSDMQKEFAQE 339
WE K+L G + G +G + +G VA+K+LK S++ ++ E
Sbjct: 18 WEFPRKNLVLGKTLGEGEFGKVVKATAFHLKGRAGYTTVAVKMLKENASPSEL-RDLLSE 76
Query: 340 VFIMRKVRHKNVVQFIGACTKPPSLCIVTEFMSGGSVYDYLHKLKGV------------- 386
++++V H +V++ GAC++ L ++ E+ GS+ +L + + V
Sbjct: 77 FNVLKQVNHPHVIKLYGACSQDGPLLLIVEYAKYGSLRGFLRESRKVGPGYLGSGGSRNS 136
Query: 387 ----------FKLPSLLKVAIDVSKGMNYLHQNNIIHRDLKAANLLMDEN 426
+ L+ A +S+GM YL + ++HRDL A N+L+ E
Sbjct: 137 SSLDHPDERALTMGDLISFAWQISQGMQYLAEMKLVHRDLAARNILVAEG 186
>pdb|3LXK|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
pdb|3LXL|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
Length = 327
Score = 67.0 bits (162), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 42/141 (29%), Positives = 74/141 (52%), Gaps = 10/141 (7%)
Query: 292 KHLKFGSKVASGSYG--DLYR----GTYCSQDVAIKVLKPERINSDMQKEFAQEVFIMRK 345
+HLK+ S++ G++G +L R G VA+K L + D Q++F +E+ I++
Sbjct: 23 RHLKYISQLGKGNFGSVELCRYDPLGDNTGALVAVKQL--QHSGPDQQRDFQREIQILKA 80
Query: 346 VRHKNVVQFIGACTKP--PSLCIVTEFMSGGSVYDYLHKLKGVFKLPSLLKVAIDVSKGM 403
+ +V++ G P SL +V E++ G + D+L + + LL + + KGM
Sbjct: 81 LHSDFIVKYRGVSYGPGRQSLRLVMEYLPSGCLRDFLQRHRARLDASRLLLYSSQICKGM 140
Query: 404 NYLHQNNIIHRDLKAANLLMD 424
YL +HRDL A N+L++
Sbjct: 141 EYLGSRRCVHRDLAARNILVE 161
>pdb|1M7N|A Chain A, Crystal Structure Of Unactivated Apo Insulin-Like Growth
Factor-1 Receptor Kinase Domain
pdb|1M7N|B Chain B, Crystal Structure Of Unactivated Apo Insulin-Like Growth
Factor-1 Receptor Kinase Domain
Length = 322
Score = 67.0 bits (162), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 49/182 (26%), Positives = 85/182 (46%), Gaps = 27/182 (14%)
Query: 285 DVWEIDPKHLKFGSKVASGSYGDLYRGTYCS-------QDVAIKVLKPERINSDMQKEFA 337
D WE+ + + ++ GS+G +Y G VAIK + E + + EF
Sbjct: 18 DEWEVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVN-EAASMRERIEFL 76
Query: 338 QEVFIMRKVRHKNVVQFIGACTKPPSLCIVTEFMSGGSVYDYLHKLKG------VFKLPS 391
E +M++ +VV+ +G ++ ++ E M+ G + YL L+ V PS
Sbjct: 77 NEASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPS 136
Query: 392 L---LKVAIDVSKGMNYLHQNNIIHRDLKAANLLMDENEVSLLLSLCLFTVSILFCGKGR 448
L +++A +++ GM YL+ N +HRDL A N ++ E+ FTV I G R
Sbjct: 137 LSKMIQMAGEIADGMAYLNANKFVHRDLAARNCMVAED----------FTVKIGDFGMTR 186
Query: 449 EL 450
++
Sbjct: 187 DI 188
>pdb|4H1J|A Chain A, Crystal Structure Of Pyk2 With The Pyrazole 13a
pdb|4H1M|A Chain A, Crystal Structure Of Pyk2 With The Indole 10c
Length = 293
Score = 66.6 bits (161), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 38/133 (28%), Positives = 69/133 (51%), Gaps = 7/133 (5%)
Query: 300 VASGSYGDLYRGTYCSQ-----DVAIKVLKPERINSDMQKEFAQEVFIMRKVRHKNVVQF 354
+ G +G++Y G Y + +VA+K K + D +++F E IM+ + H ++V+
Sbjct: 32 LGEGFFGEVYEGVYTNHKGEKINVAVKTCKKD-CTLDNKEKFMSEAVIMKNLDHPHIVKL 90
Query: 355 IGACTKPPSLCIVTEFMSGGSVYDYLHKLKGVFKLPSLLKVAIDVSKGMNYLHQNNIIHR 414
IG + P+ I+ E G + YL + K K+ +L+ ++ + K M YL N +HR
Sbjct: 91 IGIIEEEPTW-IIMELYPYGELGHYLERNKNSLKVLTLVLYSLQICKAMAYLESINCVHR 149
Query: 415 DLKAANLLMDENE 427
D+ N+L+ E
Sbjct: 150 DIAVRNILVASPE 162
>pdb|1U59|A Chain A, Crystal Structure Of The Zap-70 Kinase Domain In Complex
With Staurosporine
Length = 287
Score = 66.6 bits (161), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 41/129 (31%), Positives = 72/129 (55%), Gaps = 6/129 (4%)
Query: 299 KVASGSYGDLYRGTYCSQ----DVAIKVLKPERINSDMQKEFAQEVFIMRKVRHKNVVQF 354
++ G++G + +G Y + DVAIKVLK +D + E +E IM ++ + +V+
Sbjct: 17 ELGCGNFGSVRQGVYRMRKKQIDVAIKVLKQGTEKADTE-EMMREAQIMHQLDNPYIVRL 75
Query: 355 IGACTKPPSLCIVTEFMSGGSVYDYLHKLKGVFKLPSLLKVAIDVSKGMNYLHQNNIIHR 414
IG C + +L +V E GG ++ +L + + ++ ++ VS GM YL + N +HR
Sbjct: 76 IGVC-QAEALMLVMEMAGGGPLHKFLVGKREEIPVSNVAELLHQVSMGMKYLEEKNFVHR 134
Query: 415 DLKAANLLM 423
DL A N+L+
Sbjct: 135 DLAARNVLL 143
>pdb|1T46|A Chain A, Structural Basis For The Autoinhibition And Sti-571
Inhibition Of C-kit Tyrosine Kinase
Length = 313
Score = 66.6 bits (161), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 41/167 (24%), Positives = 75/167 (44%), Gaps = 24/167 (14%)
Query: 287 WEIDPKHLKFGSKVASGSYGDLYRGTY-------CSQDVAIKVLKPERINSDMQKEFAQE 339
WE L FG + +G++G + T + VA+K+LKP ++ + ++
Sbjct: 18 WEFPRNRLSFGKTLGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAHLTEREALMSEL 77
Query: 340 VFIMRKVRHKNVVQFIGACTKPPSLCIVTEFMSGGSVYDYLHKLKGVFKL----PSLL-- 393
+ H N+V +GACT ++TE+ G + ++L + + F P+++
Sbjct: 78 KVLSYLGNHMNIVNLLGACTIGGPTLVITEYCCYGDLLNFLRRKRDSFICSKTSPAIMED 137
Query: 394 -----------KVAIDVSKGMNYLHQNNIIHRDLKAANLLMDENEVS 429
+ V+KGM +L N IHRDL A N+L+ ++
Sbjct: 138 DELALDLEDLLSFSYQVAKGMAFLASKNCIHRDLAARNILLTHGRIT 184
>pdb|1K3A|A Chain A, Structure Of The Insulin-Like Growth Factor 1 Receptor
Kinase
Length = 299
Score = 66.6 bits (161), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 49/182 (26%), Positives = 85/182 (46%), Gaps = 27/182 (14%)
Query: 285 DVWEIDPKHLKFGSKVASGSYGDLYRGTYCS-------QDVAIKVLKPERINSDMQKEFA 337
D WE+ + + ++ GS+G +Y G VAIK + E + + EF
Sbjct: 3 DEWEVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVN-EAASMRERIEFL 61
Query: 338 QEVFIMRKVRHKNVVQFIGACTKPPSLCIVTEFMSGGSVYDYLHKLKG------VFKLPS 391
E +M++ +VV+ +G ++ ++ E M+ G + YL L+ V PS
Sbjct: 62 NEASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPS 121
Query: 392 L---LKVAIDVSKGMNYLHQNNIIHRDLKAANLLMDENEVSLLLSLCLFTVSILFCGKGR 448
L +++A +++ GM YL+ N +HRDL A N ++ E+ FTV I G R
Sbjct: 122 LSKMIQMAGEIADGMAYLNANKFVHRDLAARNCMVAED----------FTVKIGDFGMTR 171
Query: 449 EL 450
++
Sbjct: 172 DI 173
>pdb|3CKW|A Chain A, Crystal Structure Of Sterile 20-Like Kinase 3 (Mst3,
Stk24)
Length = 304
Score = 66.6 bits (161), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 42/135 (31%), Positives = 74/135 (54%), Gaps = 6/135 (4%)
Query: 299 KVASGSYGDLYRG--TYCSQDVAIKVLKPERINSDMQKEFAQEVFIMRKVRHKNVVQFIG 356
K+ GS+G++++G + VAIK++ E +++ QE+ ++ + V ++ G
Sbjct: 14 KIGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAEDEIEDI-QQEITVLSQCDSPYVTKYYG 72
Query: 357 ACTKPPSLCIVTEFMSGGSVYDYLHKLKGVFKLPSLLKVAIDVSKGMNYLHQNNIIHRDL 416
+ K L I+ E++ GGS D L G + + ++ KG++YLH IHRD+
Sbjct: 73 SYLKDTKLWIIMEYLGGGSALDLLEP--GPLDETQIATILREILKGLDYLHSEKKIHRDI 130
Query: 417 KAANLLMDEN-EVSL 430
KAAN+L+ E+ EV L
Sbjct: 131 KAANVLLSEHGEVKL 145
>pdb|3FZO|A Chain A, Crystal Structure Of Pyk2-Apo, Proline-Rich Tyrosine
Kinase
pdb|3FZP|A Chain A, Crystal Structure Of Pyk2 Complexed With Atpgs
pdb|3FZR|A Chain A, Crystal Structure Of Pyk2 Complexed With Pf-431396
pdb|3FZS|A Chain A, Crystal Structure Of Pyk2 Complexed With Birb796
pdb|3FZT|A Chain A, Crystal Structure Of Pyk2 Complexed With Pf-4618433
pdb|3H3C|A Chain A, Crystal Structure Of Pyk2 In Complex With Sulfoximine-
Substituted Trifluoromethylpyrimidine Analog
pdb|3ET7|A Chain A, Crystal Structure Of Pyk2 Complexed With Pf-2318841
Length = 277
Score = 66.6 bits (161), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 38/133 (28%), Positives = 69/133 (51%), Gaps = 7/133 (5%)
Query: 300 VASGSYGDLYRGTYCSQ-----DVAIKVLKPERINSDMQKEFAQEVFIMRKVRHKNVVQF 354
+ G +G++Y G Y + +VA+K K + D +++F E IM+ + H ++V+
Sbjct: 16 LGEGFFGEVYEGVYTNHKGEKINVAVKTCKKD-CTLDNKEKFMSEAVIMKNLDHPHIVKL 74
Query: 355 IGACTKPPSLCIVTEFMSGGSVYDYLHKLKGVFKLPSLLKVAIDVSKGMNYLHQNNIIHR 414
IG + P+ I+ E G + YL + K K+ +L+ ++ + K M YL N +HR
Sbjct: 75 IGIIEEEPTW-IIMELYPYGELGHYLERNKNSLKVLTLVLYSLQICKAMAYLESINCVHR 133
Query: 415 DLKAANLLMDENE 427
D+ N+L+ E
Sbjct: 134 DIAVRNILVASPE 146
>pdb|3CKX|A Chain A, Crystal Structure Of Sterile 20-Like Kinase 3 (Mst3,
Stk24) In Complex With Staurosporine
Length = 304
Score = 66.6 bits (161), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 42/135 (31%), Positives = 74/135 (54%), Gaps = 6/135 (4%)
Query: 299 KVASGSYGDLYRG--TYCSQDVAIKVLKPERINSDMQKEFAQEVFIMRKVRHKNVVQFIG 356
K+ GS+G++++G + VAIK++ E +++ QE+ ++ + V ++ G
Sbjct: 14 KIGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAEDEIEDI-QQEITVLSQCDSPYVTKYYG 72
Query: 357 ACTKPPSLCIVTEFMSGGSVYDYLHKLKGVFKLPSLLKVAIDVSKGMNYLHQNNIIHRDL 416
+ K L I+ E++ GGS D L G + + ++ KG++YLH IHRD+
Sbjct: 73 SYLKDTKLWIIMEYLGGGSALDLLEP--GPLDETQIATILREILKGLDYLHSEKKIHRDI 130
Query: 417 KAANLLMDEN-EVSL 430
KAAN+L+ E+ EV L
Sbjct: 131 KAANVLLSEHGEVKL 145
>pdb|1P4O|A Chain A, Structure Of Apo Unactivated Igf-1r Kinase Domain At 1.5a
Resolution.
pdb|1P4O|B Chain B, Structure Of Apo Unactivated Igf-1r Kinase Domain At 1.5a
Resolution
Length = 322
Score = 66.6 bits (161), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 49/182 (26%), Positives = 85/182 (46%), Gaps = 27/182 (14%)
Query: 285 DVWEIDPKHLKFGSKVASGSYGDLYRGTYCS-------QDVAIKVLKPERINSDMQKEFA 337
D WE+ + + ++ GS+G +Y G VAIK + E + + EF
Sbjct: 18 DEWEVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVN-EAASMRERIEFL 76
Query: 338 QEVFIMRKVRHKNVVQFIGACTKPPSLCIVTEFMSGGSVYDYLHKLKG------VFKLPS 391
E +M++ +VV+ +G ++ ++ E M+ G + YL L+ V PS
Sbjct: 77 NEASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPAMANNPVLAPPS 136
Query: 392 L---LKVAIDVSKGMNYLHQNNIIHRDLKAANLLMDENEVSLLLSLCLFTVSILFCGKGR 448
L +++A +++ GM YL+ N +HRDL A N ++ E+ FTV I G R
Sbjct: 137 LSKMIQMAGEIADGMAYLNANKFVHRDLAARNCMVAED----------FTVKIGDFGMTR 186
Query: 449 EL 450
++
Sbjct: 187 DI 188
>pdb|3IGO|A Chain A, Crystal Structure Of Cryptosporidium Parvum Cdpk1,
Cgd3_920
pdb|3MWU|A Chain A, Activated Calcium-Dependent Protein Kinase 1 From
Cryptosporidium Parvum (Cpcdpk1) In Complex With Bumped
Kinase Inhibitor Rm-1-95
pdb|3NCG|A Chain A, Activated Calcium-Dependent Protein Kinase 1 From
Cryptosporidium Parvum (Cpcdpk1) In Complex With Bumped
Kinase Inhibitor Nm-Pp1
Length = 486
Score = 66.6 bits (161), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 39/146 (26%), Positives = 73/146 (50%), Gaps = 3/146 (2%)
Query: 300 VASGSYGDLYR--GTYCSQDVAIKVLKPERINSDMQKEFAQEVFIMRKVRHKNVVQFIGA 357
+ GS+G++ + Q+ A+KV+ + +EV +++K+ H N+++
Sbjct: 30 LGKGSFGEVLKCKDRITQQEYAVKVINKASAKNKDTSTILREVELLKKLDHPNIMKLFEI 89
Query: 358 CTKPPSLCIVTEFMSGGSVYDYLHKLKGVFKLPSLLKVAIDVSKGMNYLHQNNIIHRDLK 417
S IV E +GG ++D + K K F ++ V G+ Y+H++NI+HRDLK
Sbjct: 90 LEDSSSFYIVGELYTGGELFDEIIKRKR-FSEHDAARIIKQVFSGITYMHKHNIVHRDLK 148
Query: 418 AANLLMDENEVSLLLSLCLFTVSILF 443
N+L++ E + + F +S F
Sbjct: 149 PENILLESKEKDCDIKIIDFGLSTCF 174
>pdb|2ZM3|A Chain A, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|2ZM3|B Chain B, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|2ZM3|C Chain C, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|2ZM3|D Chain D, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|3F5P|A Chain A, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|B Chain B, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|C Chain C, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|D Chain D, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|E Chain E, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|F Chain F, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|G Chain G, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|H Chain H, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|I Chain I, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|J Chain J, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|K Chain K, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|M Chain M, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|L Chain L, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|R Chain R, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|S Chain S, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|T Chain T, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
Length = 308
Score = 66.6 bits (161), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 49/182 (26%), Positives = 85/182 (46%), Gaps = 27/182 (14%)
Query: 285 DVWEIDPKHLKFGSKVASGSYGDLYRGTYCS-------QDVAIKVLKPERINSDMQKEFA 337
D WE+ + + ++ GS+G +Y G VAIK + E + + EF
Sbjct: 12 DEWEVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVN-EAASMRERIEFL 70
Query: 338 QEVFIMRKVRHKNVVQFIGACTKPPSLCIVTEFMSGGSVYDYLHKLKG------VFKLPS 391
E +M++ +VV+ +G ++ ++ E M+ G + YL L+ V PS
Sbjct: 71 NEASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPS 130
Query: 392 L---LKVAIDVSKGMNYLHQNNIIHRDLKAANLLMDENEVSLLLSLCLFTVSILFCGKGR 448
L +++A +++ GM YL+ N +HRDL A N ++ E+ FTV I G R
Sbjct: 131 LSKMIQMAGEIADGMAYLNANKFVHRDLAARNCMVAED----------FTVKIGDFGMTR 180
Query: 449 EL 450
++
Sbjct: 181 DI 182
>pdb|3CC6|A Chain A, Crystal Structure Of Kinase Domain Of Protein Tyrosine
Kinase 2 Beta (ptk2b)
Length = 281
Score = 66.6 bits (161), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 38/133 (28%), Positives = 69/133 (51%), Gaps = 7/133 (5%)
Query: 300 VASGSYGDLYRGTYCSQ-----DVAIKVLKPERINSDMQKEFAQEVFIMRKVRHKNVVQF 354
+ G +G++Y G Y + +VA+K K + D +++F E IM+ + H ++V+
Sbjct: 20 LGEGFFGEVYEGVYTNHKGEKINVAVKTCKKD-CTLDNKEKFMSEAVIMKNLDHPHIVKL 78
Query: 355 IGACTKPPSLCIVTEFMSGGSVYDYLHKLKGVFKLPSLLKVAIDVSKGMNYLHQNNIIHR 414
IG + P+ I+ E G + YL + K K+ +L+ ++ + K M YL N +HR
Sbjct: 79 IGIIEEEPTW-IIMELYPYGELGHYLERNKNSLKVLTLVLYSLQICKAMAYLESINCVHR 137
Query: 415 DLKAANLLMDENE 427
D+ N+L+ E
Sbjct: 138 DIAVRNILVASPE 150
>pdb|3ZHP|C Chain C, Human Mst3 (stk24) In Complex With Mo25beta
pdb|3ZHP|D Chain D, Human Mst3 (stk24) In Complex With Mo25beta
Length = 294
Score = 66.6 bits (161), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 42/135 (31%), Positives = 74/135 (54%), Gaps = 6/135 (4%)
Query: 299 KVASGSYGDLYRG--TYCSQDVAIKVLKPERINSDMQKEFAQEVFIMRKVRHKNVVQFIG 356
K+ GS+G++++G + VAIK++ E +++ QE+ ++ + V ++ G
Sbjct: 34 KIGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAEDEIEDI-QQEITVLSQCDSPYVTKYYG 92
Query: 357 ACTKPPSLCIVTEFMSGGSVYDYLHKLKGVFKLPSLLKVAIDVSKGMNYLHQNNIIHRDL 416
+ K L I+ E++ GGS D L G + + ++ KG++YLH IHRD+
Sbjct: 93 SYLKDTKLWIIMEYLGGGSALDLLEP--GPLDETQIATILREILKGLDYLHSEKKIHRDI 150
Query: 417 KAANLLMDEN-EVSL 430
KAAN+L+ E+ EV L
Sbjct: 151 KAANVLLSEHGEVKL 165
>pdb|1PKG|A Chain A, Structure Of A C-kit Kinase Product Complex
pdb|1PKG|B Chain B, Structure Of A C-kit Kinase Product Complex
Length = 329
Score = 66.6 bits (161), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 43/178 (24%), Positives = 80/178 (44%), Gaps = 27/178 (15%)
Query: 287 WEIDPKHLKFGSKVASGSYGDLYRGTY-------CSQDVAIKVLKPERINSDMQKEFAQE 339
WE L FG + +G++G + T + VA+K+LKP ++ + ++
Sbjct: 34 WEFPRNRLSFGKTLGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAHLTEREALMSEL 93
Query: 340 VFIMRKVRHKNVVQFIGACTKPPSLCIVTEFMSGGSVYDYLHKLKGVFKL----PSLL-- 393
+ H N+V +GACT ++TE+ G + ++L + + F P+++
Sbjct: 94 KVLSYLGNHMNIVNLLGACTIGGPTLVITEYCCYGDLLNFLRRKRDSFICSKTSPAIMED 153
Query: 394 -----------KVAIDVSKGMNYLHQNNIIHRDLKAANLLMDENEVSLLLSLCLFTVS 440
+ V+KGM +L N IHRDL A N+L+ ++ +C F ++
Sbjct: 154 DELALDLEDLLSFSYQVAKGMAFLASKNCIHRDLAARNILLTHGRIT---KICDFGLA 208
>pdb|3I81|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With Bms-754807
[1-(4-((5-Cyclopropyl-
1h-Pyrazol-3-Yl)amino)pyrrolo[2,1-F][1,2,
4]triazin-2-Yl)-N-
(6-Fluoro-3-Pyridinyl)-2-Methyl-L-Prolinamide]
Length = 315
Score = 66.6 bits (161), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 49/182 (26%), Positives = 85/182 (46%), Gaps = 27/182 (14%)
Query: 285 DVWEIDPKHLKFGSKVASGSYGDLYRGTYCS-------QDVAIKVLKPERINSDMQKEFA 337
D WE+ + + ++ GS+G +Y G VAIK + E + + EF
Sbjct: 11 DEWEVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVN-EAASMRERIEFL 69
Query: 338 QEVFIMRKVRHKNVVQFIGACTKPPSLCIVTEFMSGGSVYDYLHKLKG------VFKLPS 391
E +M++ +VV+ +G ++ ++ E M+ G + YL L+ V PS
Sbjct: 70 NEASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPS 129
Query: 392 L---LKVAIDVSKGMNYLHQNNIIHRDLKAANLLMDENEVSLLLSLCLFTVSILFCGKGR 448
L +++A +++ GM YL+ N +HRDL A N ++ E+ FTV I G R
Sbjct: 130 LSKMIQMAGEIADGMAYLNANKFVHRDLAARNCMVAED----------FTVKIGDFGMTR 179
Query: 449 EL 450
++
Sbjct: 180 DI 181
>pdb|1T45|A Chain A, Structural Basis For The Autoinhibition And Sti-571
Inhibition Of C- Kit Tyrosine Kinase
Length = 331
Score = 66.6 bits (161), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 43/178 (24%), Positives = 80/178 (44%), Gaps = 27/178 (15%)
Query: 287 WEIDPKHLKFGSKVASGSYGDLYRGTY-------CSQDVAIKVLKPERINSDMQKEFAQE 339
WE L FG + +G++G + T + VA+K+LKP ++ + ++
Sbjct: 36 WEFPRNRLSFGKTLGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAHLTEREALMSEL 95
Query: 340 VFIMRKVRHKNVVQFIGACTKPPSLCIVTEFMSGGSVYDYLHKLKGVFKL----PSLL-- 393
+ H N+V +GACT ++TE+ G + ++L + + F P+++
Sbjct: 96 KVLSYLGNHMNIVNLLGACTIGGPTLVITEYCCYGDLLNFLRRKRDSFICSKTSPAIMED 155
Query: 394 -----------KVAIDVSKGMNYLHQNNIIHRDLKAANLLMDENEVSLLLSLCLFTVS 440
+ V+KGM +L N IHRDL A N+L+ ++ +C F ++
Sbjct: 156 DELALDLEDLLSFSYQVAKGMAFLASKNCIHRDLAARNILLTHGRIT---KICDFGLA 210
>pdb|3O23|A Chain A, Human Unphosphorylated Igf1-R Kinase Domain In Complex
With An Hydantoin Inhibitor
Length = 305
Score = 66.2 bits (160), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 49/182 (26%), Positives = 85/182 (46%), Gaps = 27/182 (14%)
Query: 285 DVWEIDPKHLKFGSKVASGSYGDLYRGTYCS-------QDVAIKVLKPERINSDMQKEFA 337
D WE+ + + ++ GS+G +Y G VAIK + E + + EF
Sbjct: 9 DEWEVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVN-EAASMRERIEFL 67
Query: 338 QEVFIMRKVRHKNVVQFIGACTKPPSLCIVTEFMSGGSVYDYLHKLKG------VFKLPS 391
E +M++ +VV+ +G ++ ++ E M+ G + YL L+ V PS
Sbjct: 68 NEASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPS 127
Query: 392 L---LKVAIDVSKGMNYLHQNNIIHRDLKAANLLMDENEVSLLLSLCLFTVSILFCGKGR 448
L +++A +++ GM YL+ N +HRDL A N ++ E+ FTV I G R
Sbjct: 128 LSKMIQMAGEIADGMAYLNANKFVHRDLAARNCMVAED----------FTVKIGDFGMTR 177
Query: 449 EL 450
++
Sbjct: 178 DI 179
>pdb|3LW0|A Chain A, Igf-1rk In Complex With Ligand Msc1609119a-1
pdb|3LW0|B Chain B, Igf-1rk In Complex With Ligand Msc1609119a-1
pdb|3LW0|C Chain C, Igf-1rk In Complex With Ligand Msc1609119a-1
pdb|3LW0|D Chain D, Igf-1rk In Complex With Ligand Msc1609119a-1
Length = 304
Score = 66.2 bits (160), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 49/182 (26%), Positives = 85/182 (46%), Gaps = 27/182 (14%)
Query: 285 DVWEIDPKHLKFGSKVASGSYGDLYRGTYCS-------QDVAIKVLKPERINSDMQKEFA 337
D WE+ + + ++ GS+G +Y G VAIK + E + + EF
Sbjct: 8 DEWEVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVN-EAASMRERIEFL 66
Query: 338 QEVFIMRKVRHKNVVQFIGACTKPPSLCIVTEFMSGGSVYDYLHKLKG------VFKLPS 391
E +M++ +VV+ +G ++ ++ E M+ G + YL L+ V PS
Sbjct: 67 NEASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPAMANNPVLAPPS 126
Query: 392 L---LKVAIDVSKGMNYLHQNNIIHRDLKAANLLMDENEVSLLLSLCLFTVSILFCGKGR 448
L +++A +++ GM YL+ N +HRDL A N ++ E+ FTV I G R
Sbjct: 127 LSKMIQMAGEIADGMAYLNANKFVHRDLAARNCMVAED----------FTVKIGDFGMTR 176
Query: 449 EL 450
++
Sbjct: 177 DI 178
>pdb|2OJ9|A Chain A, Structure Of Igf-1r Kinase Domain Complexed With A
Benzimidazole Inhibitor
pdb|3NW5|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With A Carbon-Linked Proline
Isostere Inhibitor (11b)
pdb|3NW6|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With A Carbon-Linked Proline
Isostere Inhibitor (11a)
pdb|3NW7|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With A Carbon-Linked Proline
Isostere Inhibitor (34)
Length = 307
Score = 66.2 bits (160), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 49/182 (26%), Positives = 85/182 (46%), Gaps = 27/182 (14%)
Query: 285 DVWEIDPKHLKFGSKVASGSYGDLYRGTYCS-------QDVAIKVLKPERINSDMQKEFA 337
D WE+ + + ++ GS+G +Y G VAIK + E + + EF
Sbjct: 11 DEWEVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVN-EAASMRERIEFL 69
Query: 338 QEVFIMRKVRHKNVVQFIGACTKPPSLCIVTEFMSGGSVYDYLHKLKG------VFKLPS 391
E +M++ +VV+ +G ++ ++ E M+ G + YL L+ V PS
Sbjct: 70 NEASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPS 129
Query: 392 L---LKVAIDVSKGMNYLHQNNIIHRDLKAANLLMDENEVSLLLSLCLFTVSILFCGKGR 448
L +++A +++ GM YL+ N +HRDL A N ++ E+ FTV I G R
Sbjct: 130 LSKMIQMAGEIADGMAYLNANKFVHRDLAARNCMVAED----------FTVKIGDFGMTR 179
Query: 449 EL 450
++
Sbjct: 180 DI 181
>pdb|3QQU|A Chain A, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
pdb|3QQU|B Chain B, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
pdb|3QQU|C Chain C, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
pdb|3QQU|D Chain D, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
Length = 301
Score = 66.2 bits (160), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 49/182 (26%), Positives = 85/182 (46%), Gaps = 27/182 (14%)
Query: 285 DVWEIDPKHLKFGSKVASGSYGDLYRGTYCS-------QDVAIKVLKPERINSDMQKEFA 337
D WE+ + + ++ GS+G +Y G VAIK + E + + EF
Sbjct: 5 DEWEVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVN-EAASMRERIEFL 63
Query: 338 QEVFIMRKVRHKNVVQFIGACTKPPSLCIVTEFMSGGSVYDYLHKLKG------VFKLPS 391
E +M++ +VV+ +G ++ ++ E M+ G + YL L+ V PS
Sbjct: 64 NEASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPS 123
Query: 392 L---LKVAIDVSKGMNYLHQNNIIHRDLKAANLLMDENEVSLLLSLCLFTVSILFCGKGR 448
L +++A +++ GM YL+ N +HRDL A N ++ E+ FTV I G R
Sbjct: 124 LSKMIQMAGEIADGMAYLNANKFVHRDLAARNCMVAED----------FTVKIGDFGMTR 173
Query: 449 EL 450
++
Sbjct: 174 DI 175
>pdb|1JQH|A Chain A, Igf-1 Receptor Kinase Domain
pdb|1JQH|B Chain B, Igf-1 Receptor Kinase Domain
pdb|1JQH|C Chain C, Igf-1 Receptor Kinase Domain
Length = 308
Score = 66.2 bits (160), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 49/182 (26%), Positives = 85/182 (46%), Gaps = 27/182 (14%)
Query: 285 DVWEIDPKHLKFGSKVASGSYGDLYRGTYCS-------QDVAIKVLKPERINSDMQKEFA 337
D WE+ + + ++ GS+G +Y G VAIK + E + + EF
Sbjct: 12 DEWEVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVN-EAASMRERIEFL 70
Query: 338 QEVFIMRKVRHKNVVQFIGACTKPPSLCIVTEFMSGGSVYDYLHKLKG------VFKLPS 391
E +M++ +VV+ +G ++ ++ E M+ G + YL L+ V PS
Sbjct: 71 NEASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPS 130
Query: 392 L---LKVAIDVSKGMNYLHQNNIIHRDLKAANLLMDENEVSLLLSLCLFTVSILFCGKGR 448
L +++A +++ GM YL+ N +HRDL A N ++ E+ FTV I G R
Sbjct: 131 LSKMIQMAGEIADGMAYLNANKFVHRDLAARNCMVAED----------FTVKIGDFGMTR 180
Query: 449 EL 450
++
Sbjct: 181 DI 182
>pdb|3G0F|A Chain A, Kit Kinase Domain Mutant D816h In Complex With Sunitinib
pdb|3G0F|B Chain B, Kit Kinase Domain Mutant D816h In Complex With Sunitinib
Length = 336
Score = 66.2 bits (160), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 43/178 (24%), Positives = 80/178 (44%), Gaps = 27/178 (15%)
Query: 287 WEIDPKHLKFGSKVASGSYGDLYRGTY-------CSQDVAIKVLKPERINSDMQKEFAQE 339
WE L FG + +G++G + T + VA+K+LKP ++ + ++
Sbjct: 41 WEFPRNRLSFGKTLGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAHLTEREALMSEL 100
Query: 340 VFIMRKVRHKNVVQFIGACTKPPSLCIVTEFMSGGSVYDYLHKLKGVFKL----PSLL-- 393
+ H N+V +GACT ++TE+ G + ++L + + F P+++
Sbjct: 101 KVLSYLGNHMNIVNLLGACTIGGPTLVITEYCCYGDLLNFLRRKRDSFICSKTSPAIMED 160
Query: 394 -----------KVAIDVSKGMNYLHQNNIIHRDLKAANLLMDENEVSLLLSLCLFTVS 440
+ V+KGM +L N IHRDL A N+L+ ++ +C F ++
Sbjct: 161 DELALDLEDLLSFSYQVAKGMAFLASKNCIHRDLAARNILLTHGRIT---KICDFGLA 215
>pdb|3G0E|A Chain A, Kit Kinase Domain In Complex With Sunitinib
Length = 336
Score = 66.2 bits (160), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 43/178 (24%), Positives = 80/178 (44%), Gaps = 27/178 (15%)
Query: 287 WEIDPKHLKFGSKVASGSYGDLYRGTY-------CSQDVAIKVLKPERINSDMQKEFAQE 339
WE L FG + +G++G + T + VA+K+LKP ++ + ++
Sbjct: 41 WEFPRNRLSFGKTLGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAHLTEREALMSEL 100
Query: 340 VFIMRKVRHKNVVQFIGACTKPPSLCIVTEFMSGGSVYDYLHKLKGVFKL----PSLL-- 393
+ H N+V +GACT ++TE+ G + ++L + + F P+++
Sbjct: 101 KVLSYLGNHMNIVNLLGACTIGGPTLVITEYCCYGDLLNFLRRKRDSFICSKTSPAIMED 160
Query: 394 -----------KVAIDVSKGMNYLHQNNIIHRDLKAANLLMDENEVSLLLSLCLFTVS 440
+ V+KGM +L N IHRDL A N+L+ ++ +C F ++
Sbjct: 161 DELALDLEDLLSFSYQVAKGMAFLASKNCIHRDLAARNILLTHGRIT---KICDFGLA 215
>pdb|3MDY|A Chain A, Crystal Structure Of The Cytoplasmic Domain Of The Bone
Morp Protein Receptor Type-1b (Bmpr1b) In Complex With
Fkbp12 An 193189
pdb|3MDY|C Chain C, Crystal Structure Of The Cytoplasmic Domain Of The Bone
Morp Protein Receptor Type-1b (Bmpr1b) In Complex With
Fkbp12 An 193189
Length = 337
Score = 66.2 bits (160), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 46/158 (29%), Positives = 76/158 (48%), Gaps = 19/158 (12%)
Query: 292 KHLKFGSKVASGSYGDLYRGTYCSQDVAIKV-LKPERINSDMQKEFAQEVFIMRKVRHKN 350
K ++ ++ G YG+++ G + + VA+KV E + + E Q V + RH+N
Sbjct: 37 KQIQMVKQIGKGRYGEVWMGKWRGEKVAVKVFFTTEEASWFRETEIYQTVLM----RHEN 92
Query: 351 VVQFIGACTKPPS----LCIVTEFMSGGSVYDYLHKLKGVFKLPSLLKVAIDVSKGMNYL 406
++ FI A K L ++T++ GS+YDYL S+LK+A G+ +L
Sbjct: 93 ILGFIAADIKGTGSWTQLYLITDYHENGSLYDYLKST--TLDAKSMLKLAYSSVSGLCHL 150
Query: 407 HQN--------NIIHRDLKAANLLMDENEVSLLLSLCL 436
H I HRDLK+ N+L+ +N + L L
Sbjct: 151 HTEIFSTQGKPAIAHRDLKSKNILVKKNGTCCIADLGL 188
>pdb|3LVP|A Chain A, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
pdb|3LVP|B Chain B, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
pdb|3LVP|C Chain C, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
pdb|3LVP|D Chain D, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
Length = 336
Score = 66.2 bits (160), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 49/182 (26%), Positives = 85/182 (46%), Gaps = 27/182 (14%)
Query: 285 DVWEIDPKHLKFGSKVASGSYGDLYRGTYCS-------QDVAIKVLKPERINSDMQKEFA 337
D WE+ + + ++ GS+G +Y G VAIK + E + + EF
Sbjct: 40 DEWEVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVN-EAASMRERIEFL 98
Query: 338 QEVFIMRKVRHKNVVQFIGACTKPPSLCIVTEFMSGGSVYDYLHKLKG------VFKLPS 391
E +M++ +VV+ +G ++ ++ E M+ G + YL L+ V PS
Sbjct: 99 NEASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPS 158
Query: 392 L---LKVAIDVSKGMNYLHQNNIIHRDLKAANLLMDENEVSLLLSLCLFTVSILFCGKGR 448
L +++A +++ GM YL+ N +HRDL A N ++ E+ FTV I G R
Sbjct: 159 LSKMIQMAGEIADGMAYLNANKFVHRDLAARNCMVAED----------FTVKIGDFGMTR 208
Query: 449 EL 450
++
Sbjct: 209 DI 210
>pdb|3VW6|A Chain A, Crystal Structure Of Human Apoptosis Signal-Regulating
Kinase 1 (Ask1) With Imidazopyridine Inhibitor
pdb|3VW6|B Chain B, Crystal Structure Of Human Apoptosis Signal-Regulating
Kinase 1 (Ask1) With Imidazopyridine Inhibitor
Length = 269
Score = 66.2 bits (160), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 45/149 (30%), Positives = 78/149 (52%), Gaps = 6/149 (4%)
Query: 300 VASGSYGDLYRGTYCSQDVAIKVLK-PERINSDMQKEFAQEVFIMRKVRHKNVVQFIGAC 358
+ G+YG +Y G S V I + + PER +S + +E+ + + ++HKN+VQ++G+
Sbjct: 16 LGKGTYGIVYAGRDLSNQVRIAIKEIPER-DSRYSQPLHEEIALHKHLKHKNIVQYLGSF 74
Query: 359 TKPPSLCIVTEFMSGGSVYDYLHKLKGVFK--LPSLLKVAIDVSKGMNYLHQNNIIHRDL 416
++ + I E + GGS+ L G K ++ + +G+ YLH N I+HRD+
Sbjct: 75 SENGFIKIFMEQVPGGSLSALLRSKWGPLKDNEQTIGFYTKQILEGLKYLHDNQIVHRDI 134
Query: 417 KAANLLMDENEVSLLLSLCLFTVSILFCG 445
K N+L+ N S +L + F S G
Sbjct: 135 KGDNVLI--NTYSGVLKISDFGTSKRLAG 161
>pdb|2I0V|A Chain A, C-Fms Tyrosine Kinase In Complex With A Quinolone
Inhibitor
pdb|2I0Y|A Chain A, Cfms Tyrosine Kinase (Fgf Kid) In Complex With An
Arylamide Inhibitor
pdb|3DPK|A Chain A, Cfms Tyrosine Kinase In Complex With A Pyridopyrimidinone
Inhibitor
pdb|3KRJ|A Chain A, Cfms Tyrosine Kinase In Complex With
4-Cyano-1h-Imidazole-2-Carboxylic Acid
(2-Cyclohex-1-Enyl-4-Piperidin-4-Yl-Phenyl)-Amide
pdb|3KRL|A Chain A, Cfms Tyrosine Kinase In Complex With
5-Cyano-Furan-2-Carboxylic Acid
[4-(4-Methyl-Piperazin-1-Yl)-2-Piperidin-1-Yl-Phenyl]-
Amide
Length = 335
Score = 66.2 bits (160), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 44/166 (26%), Positives = 79/166 (47%), Gaps = 24/166 (14%)
Query: 287 WEIDPKHLKFGSKVASGSYGDLYRGTY-------CSQDVAIKVLKPERINSDMQKEFAQE 339
WE +L+FG + +G++G + T VA+K+LK ++D ++ E
Sbjct: 41 WEFPRNNLQFGKTLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLK-STAHADEKEALMSE 99
Query: 340 VFIMRKV-RHKNVVQFIGACTKPPSLCIVTEFMSGGSVYDYL---------------HKL 383
+ IM + +H+N+V +GACT + ++TE+ G + ++L H
Sbjct: 100 LKIMSHLGQHENIVNLLGACTHGGPVLVITEYCCYGDLLNFLRRKRPPGLEYSYNPSHNP 159
Query: 384 KGVFKLPSLLKVAIDVSKGMNYLHQNNIIHRDLKAANLLMDENEVS 429
+ LL + V++GM +L N IHRD+ A N+L+ V+
Sbjct: 160 EEQLSSRDLLHFSSQVAQGMAFLASKNCIHRDVAARNVLLTNGHVA 205
>pdb|2WEI|A Chain A, Crystal Structure Of The Kinase Domain Of Cryptosporidium
Parvum Calcium Dependent Protein Kinase In Complex With
3- Mb-Pp1
Length = 287
Score = 65.9 bits (159), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 39/146 (26%), Positives = 73/146 (50%), Gaps = 3/146 (2%)
Query: 300 VASGSYGDLYRGT--YCSQDVAIKVLKPERINSDMQKEFAQEVFIMRKVRHKNVVQFIGA 357
+ GS+G++ + Q+ A+KV+ + +EV +++K+ H N+++
Sbjct: 30 LGKGSFGEVLKCKDRITQQEYAVKVINKASAKNKDTSTILREVELLKKLDHPNIMKLFEI 89
Query: 358 CTKPPSLCIVTEFMSGGSVYDYLHKLKGVFKLPSLLKVAIDVSKGMNYLHQNNIIHRDLK 417
S IV E +GG ++D + K K F ++ V G+ Y+H++NI+HRDLK
Sbjct: 90 LEDSSSFYIVGELYTGGELFDEIIKRKR-FSEHDAARIIKQVFSGITYMHKHNIVHRDLK 148
Query: 418 AANLLMDENEVSLLLSLCLFTVSILF 443
N+L++ E + + F +S F
Sbjct: 149 PENILLESKEKDCDIKIIDFGLSTCF 174
>pdb|3DFA|A Chain A, Crystal Structure Of Kinase Domain Of Calcium-dependent
Protein Kinase Cgd3_920 From Cryptosporidium Parvum
Length = 286
Score = 65.9 bits (159), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 39/146 (26%), Positives = 73/146 (50%), Gaps = 3/146 (2%)
Query: 300 VASGSYGDLYRGT--YCSQDVAIKVLKPERINSDMQKEFAQEVFIMRKVRHKNVVQFIGA 357
+ GS+G++ + Q+ A+KV+ + +EV +++K+ H N+++
Sbjct: 30 LGKGSFGEVLKCKDRITQQEYAVKVINKASAKNKDTSTILREVELLKKLDHPNIMKLFEI 89
Query: 358 CTKPPSLCIVTEFMSGGSVYDYLHKLKGVFKLPSLLKVAIDVSKGMNYLHQNNIIHRDLK 417
S IV E +GG ++D + K K F ++ V G+ Y+H++NI+HRDLK
Sbjct: 90 LEDSSSFYIVGELYTGGELFDEIIKRKR-FSEHDAARIIKQVFSGITYMHKHNIVHRDLK 148
Query: 418 AANLLMDENEVSLLLSLCLFTVSILF 443
N+L++ E + + F +S F
Sbjct: 149 PENILLESKEKDCDIKIIDFGLSTCF 174
>pdb|2OZO|A Chain A, Autoinhibited Intact Human Zap-70
Length = 613
Score = 65.9 bits (159), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 40/129 (31%), Positives = 72/129 (55%), Gaps = 6/129 (4%)
Query: 299 KVASGSYGDLYRGTYCSQ----DVAIKVLKPERINSDMQKEFAQEVFIMRKVRHKNVVQF 354
++ G++G + +G Y + DVAIKVLK +D + E +E IM ++ + +V+
Sbjct: 343 ELGCGNFGSVRQGVYRMRKKQIDVAIKVLKQGTEKADTE-EMMREAQIMHQLDNPYIVRL 401
Query: 355 IGACTKPPSLCIVTEFMSGGSVYDYLHKLKGVFKLPSLLKVAIDVSKGMNYLHQNNIIHR 414
IG C + +L +V E GG ++ +L + + ++ ++ VS GM YL + N +HR
Sbjct: 402 IGVC-QAEALMLVMEMAGGGPLHKFLVGKREEIPVSNVAELLHQVSMGMKYLEEKNFVHR 460
Query: 415 DLKAANLLM 423
+L A N+L+
Sbjct: 461 NLAARNVLL 469
>pdb|2YZA|A Chain A, Crystal Structure Of Kinase Domain Of Human
5'-Amp-Activated Protein Kinase Alpha-2 Subunit Mutant
(T172d)
pdb|3AQV|A Chain A, Human Amp-Activated Protein Kinase Alpha 2 Subunit Kinase
Domain (T172d) Complexed With Compound C
Length = 276
Score = 65.5 bits (158), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 35/137 (25%), Positives = 76/137 (55%), Gaps = 4/137 (2%)
Query: 293 HLKFGSKVASGSYGDLYRGTY--CSQDVAIKVLKPERINS-DMQKEFAQEVFIMRKVRHK 349
H G + G++G + G + VA+K+L ++I S D+ + +E+ ++ RH
Sbjct: 12 HYVLGDTLGVGTFGKVKIGEHQLTGHKVAVKILNRQKIRSLDVVGKIKREIQNLKLFRHP 71
Query: 350 NVVQFIGACTKPPSLCIVTEFMSGGSVYDYLHKLKGVFKLPSLLKVAIDVSKGMNYLHQN 409
++++ + P +V E++SGG ++DY+ K V ++ + ++ + ++Y H++
Sbjct: 72 HIIKLYQVISTPTDFFMVMEYVSGGELFDYICKHGRVEEMEA-RRLFQQILSAVDYCHRH 130
Query: 410 NIIHRDLKAANLLMDEN 426
++HRDLK N+L+D +
Sbjct: 131 MVVHRDLKPENVLLDAH 147
>pdb|2H6D|A Chain A, Protein Kinase Domain Of The Human 5'-Amp-Activated
Protein Kinase Catalytic Subunit Alpha-2 (Ampk Alpha-2
Chain)
Length = 276
Score = 65.5 bits (158), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 35/137 (25%), Positives = 76/137 (55%), Gaps = 4/137 (2%)
Query: 293 HLKFGSKVASGSYGDLYRGTY--CSQDVAIKVLKPERINS-DMQKEFAQEVFIMRKVRHK 349
H G + G++G + G + VA+K+L ++I S D+ + +E+ ++ RH
Sbjct: 12 HYVLGDTLGVGTFGKVKIGEHQLTGHKVAVKILNRQKIRSLDVVGKIKREIQNLKLFRHP 71
Query: 350 NVVQFIGACTKPPSLCIVTEFMSGGSVYDYLHKLKGVFKLPSLLKVAIDVSKGMNYLHQN 409
++++ + P +V E++SGG ++DY+ K V ++ + ++ + ++Y H++
Sbjct: 72 HIIKLYQVISTPTDFFMVMEYVSGGELFDYICKHGRVEEMEA-RRLFQQILSAVDYCHRH 130
Query: 410 NIIHRDLKAANLLMDEN 426
++HRDLK N+L+D +
Sbjct: 131 MVVHRDLKPENVLLDAH 147
>pdb|3FPQ|A Chain A, Crystal Structure Of The Kinase Domain Of Wnk1
pdb|3FPQ|B Chain B, Crystal Structure Of The Kinase Domain Of Wnk1
Length = 290
Score = 65.1 bits (157), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 43/142 (30%), Positives = 74/142 (52%), Gaps = 9/142 (6%)
Query: 290 DPKHLKFGSKVASGSYGDLYRG--TYCSQDVAIKVLKPERINSDMQKEFAQEVFIMRKVR 347
D + LKF ++ GS+ +Y+G T + +VA L+ ++ ++ F +E ++ ++
Sbjct: 24 DGRFLKFDIEIGRGSFKTVYKGLDTETTVEVAWCELQDRKLTKSERQRFKEEAEXLKGLQ 83
Query: 348 HKNVVQFIGA--CTKPPSLCI--VTEFMSGGSVYDYLHKLKGVFKLPSLLKVAIDVSKGM 403
H N+V+F + T CI VTE + G++ YL + K V K+ L + KG+
Sbjct: 84 HPNIVRFYDSWESTVKGKKCIVLVTELXTSGTLKTYLKRFK-VXKIKVLRSWCRQILKGL 142
Query: 404 NYLHQNN--IIHRDLKAANLLM 423
+LH IIHRDLK N+ +
Sbjct: 143 QFLHTRTPPIIHRDLKCDNIFI 164
>pdb|3D94|A Chain A, Crystal Structure Of The Insulin-Like Growth Factor-1
Receptor Kinase In Complex With Pqip
Length = 301
Score = 65.1 bits (157), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 49/182 (26%), Positives = 84/182 (46%), Gaps = 27/182 (14%)
Query: 285 DVWEIDPKHLKFGSKVASGSYGDLYRGTYCS-------QDVAIKVLKPERINSDMQKEFA 337
D WE+ + + ++ GS+G +Y G VAIK + E + + EF
Sbjct: 5 DEWEVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVN-EAASMRERIEFL 63
Query: 338 QEVFIMRKVRHKNVVQFIGACTKPPSLCIVTEFMSGGSVYDYLHKLKG------VFKLPS 391
E +M++ +VV+ +G ++ ++ E M+ G + YL L+ V PS
Sbjct: 64 NEASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPS 123
Query: 392 L---LKVAIDVSKGMNYLHQNNIIHRDLKAANLLMDENEVSLLLSLCLFTVSILFCGKGR 448
L +++A +++ GM YL+ N +HRDL A N + E+ FTV I G R
Sbjct: 124 LSKMIQMAGEIADGMAYLNANKFVHRDLAARNCXVAED----------FTVKIGDFGMTR 173
Query: 449 EL 450
++
Sbjct: 174 DI 175
>pdb|3NYX|A Chain A, Non-Phosphorylated Tyk2 Jh1 Domain With
Quinoline-Thiadiazole- Thiophene Inhibitor
Length = 302
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 44/147 (29%), Positives = 76/147 (51%), Gaps = 15/147 (10%)
Query: 292 KHLKFGSKVASGSYGDLYRGTYC--------SQDVAIKVLKPERINSDMQKEFAQEVFIM 343
++LK + G +G + YC + VA+K LK + + + QE+ I+
Sbjct: 14 RYLKKIRDLGEGHFGKV--SLYCYDPTNDGTGEMVAVKALKAD-CGPQHRSGWKQEIDIL 70
Query: 344 RKVRHKNVVQFIGAC--TKPPSLCIVTEFMSGGSVYDYLHKLKGVFKLPSLLKVAIDVSK 401
R + H++++++ G C SL +V E++ GS+ DYL + L LL A + +
Sbjct: 71 RTLYHEHIIKYKGCCEDQGEKSLQLVMEYVPLGSLRDYLPRHS--IGLAQLLLFAQQICE 128
Query: 402 GMNYLHQNNIIHRDLKAANLLMDENEV 428
GM YLH + IHR+L A N+L+D + +
Sbjct: 129 GMAYLHSQHYIHRNLAARNVLLDNDRL 155
>pdb|3NZ0|A Chain A, Non-Phosphorylated Tyk2 Kinase With Cmp6
Length = 302
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 44/147 (29%), Positives = 76/147 (51%), Gaps = 15/147 (10%)
Query: 292 KHLKFGSKVASGSYGDLYRGTYC--------SQDVAIKVLKPERINSDMQKEFAQEVFIM 343
++LK + G +G + YC + VA+K LK + + + QE+ I+
Sbjct: 14 RYLKKIRDLGEGHFGKV--SLYCYDPTNDGTGEMVAVKALKAD-CGPQHRSGWKQEIDIL 70
Query: 344 RKVRHKNVVQFIGAC--TKPPSLCIVTEFMSGGSVYDYLHKLKGVFKLPSLLKVAIDVSK 401
R + H++++++ G C SL +V E++ GS+ DYL + L LL A + +
Sbjct: 71 RTLYHEHIIKYKGCCEDQGEKSLQLVMEYVPLGSLRDYLPRHS--IGLAQLLLFAQQICE 128
Query: 402 GMNYLHQNNIIHRDLKAANLLMDENEV 428
GM YLH + IHR+L A N+L+D + +
Sbjct: 129 GMAYLHAQHYIHRNLAARNVLLDNDRL 155
>pdb|2J7T|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
Bound To Su11274
pdb|4AOT|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
(Lok) Bound To Gw830263a
pdb|4AOT|B Chain B, Crystal Structure Of Human Serine Threonine Kinase-10
(Lok) Bound To Gw830263a
pdb|4EQU|A Chain A, Human Stk-10 (Lok) Kinase Domain In Dfg-Out Conformation
With Inhibitor Dsa-7
pdb|4EQU|B Chain B, Human Stk-10 (Lok) Kinase Domain In Dfg-Out Conformation
With Inhibitor Dsa-7
Length = 302
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 43/154 (27%), Positives = 72/154 (46%), Gaps = 8/154 (5%)
Query: 271 KSHPY-HLKIPNDGTDVWEIDPKHLKFGSKVASGSYGDLYRGTYCSQDVAIKVLKPERIN 329
KS Y H++ D +VWEI ++ G++G +Y+ E +
Sbjct: 4 KSREYEHVRRDLDPNEVWEI-------VGELGDGAFGKVYKAKNKETGALAAAKVIETKS 56
Query: 330 SDMQKEFAQEVFIMRKVRHKNVVQFIGACTKPPSLCIVTEFMSGGSVYDYLHKLKGVFKL 389
+ +++ E+ I+ H +V+ +GA L I+ EF GG+V + +L
Sbjct: 57 EEELEDYIVEIEILATCDHPYIVKLLGAYYHDGKLWIMIEFCPGGAVDAIMLELDRGLTE 116
Query: 390 PSLLKVAIDVSKGMNYLHQNNIIHRDLKAANLLM 423
P + V + + +N+LH IIHRDLKA N+LM
Sbjct: 117 PQIQVVCRQMLEALNFLHSKRIIHRDLKAGNVLM 150
>pdb|1LUF|A Chain A, Crystal Structure Of The Musk Tyrosine Kinase: Insights
Into Receptor Autoregulation
Length = 343
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 41/134 (30%), Positives = 67/134 (50%), Gaps = 24/134 (17%)
Query: 318 VAIKVLKPERINSDMQKEFAQEVFIMRKVRHKNVVQFIGACTKPPSLCIVTEFMSGGSVY 377
VA+K+LK E ++DMQ +F +E +M + + N+V+ +G C +C++ E+M+ G +
Sbjct: 80 VAVKMLK-EEASADMQADFQREAALMAEFDNPNIVKLLGVCAVGKPMCLLFEYMAYGDLN 138
Query: 378 DYLHKLK--GVFKL----------------PSL-----LKVAIDVSKGMNYLHQNNIIHR 414
++L + V L P L L +A V+ GM YL + +HR
Sbjct: 139 EFLRSMSPHTVCSLSHSDLSTRARVSSPGPPPLSCAEQLCIARQVAAGMAYLSERKFVHR 198
Query: 415 DLKAANLLMDENEV 428
DL N L+ EN V
Sbjct: 199 DLATRNCLVGENMV 212
>pdb|3QUP|A Chain A, Inhibitor Bound Structure Of The Kinase Domain Of The
Murine Receptor Tyrosine Kinase Tyro3 (Sky)
Length = 323
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 43/154 (27%), Positives = 74/154 (48%), Gaps = 16/154 (10%)
Query: 289 IDPKHLKFGSKVASGSYGDLYRGTYCSQD-----VAIKVLKPERINSDMQKEFAQEVFIM 343
I + G + G +G + +D VA+K+LK + I S +EF +E M
Sbjct: 20 IPEQQFTLGRMLGKGEFGSVREAQLKQEDGSFVKVAVKMLKADIIASSDIEEFLREAACM 79
Query: 344 RKVRHKNVVQFIG------ACTKPPSLCIVTEFMSGGSVYDYLHKLK---GVFKLP--SL 392
++ H +V + +G A + P ++ FM G ++ +L + F LP +L
Sbjct: 80 KEFDHPHVAKLVGVSLRSRAKGRLPIPMVILPFMKHGDLHAFLLASRIGENPFNLPLQTL 139
Query: 393 LKVAIDVSKGMNYLHQNNIIHRDLKAANLLMDEN 426
++ +D++ GM YL N IHRDL A N ++ E+
Sbjct: 140 VRFMVDIACGMEYLSSRNFIHRDLAARNCMLAED 173
>pdb|4F1M|A Chain A, Crystal Structure Of The G1179s Roco4 Kinase Domain Bound
To Appcp From D. Discoideum
Length = 287
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 43/145 (29%), Positives = 75/145 (51%), Gaps = 14/145 (9%)
Query: 294 LKFGSKVASGSYGDLYRGTYCSQD--VAIK--VLKPERINSDMQ---KEFAQEVFIMRKV 346
+++ ++ G +G +++G VAIK +L ++M +EF +EVFIM +
Sbjct: 21 IEYEKQIGKGGFGLVHKGRLVKDKSVVAIKSLILGDSEGETEMIEKFQEFQREVFIMSNL 80
Query: 347 RHKNVVQFIGACTKPPSLCIVTEFMSGGSVYDYLHKLKGVFKLPSLLKVAIDVSKGMNYL 406
H N+V+ G PP + V EF+ G +Y L K L++ +D++ G+ Y+
Sbjct: 81 NHPNIVKLYGLMHNPPRM--VMEFVPCGDLYHRLLDKAHPIKWSVKLRLMLDIALGIEYM 138
Query: 407 HQNN--IIHRDLKAANLL---MDEN 426
N I+HRDL++ N+ +DEN
Sbjct: 139 QNQNPPIVHRDLRSPNIFLQSLDEN 163
>pdb|4F0F|A Chain A, Crystal Structure Of The Roco4 Kinase Domain Bound To
Appcp From D. Discoideum
pdb|4F0G|A Chain A, Crystal Structure Of The Roco4 Kinase Domain From D.
Discoideum
pdb|4F1T|A Chain A, Crystal Structure Of The Roco4 Kinase Domain From D.
Discoideum Bound To The Rock Inhibitor H1152
Length = 287
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 43/145 (29%), Positives = 75/145 (51%), Gaps = 14/145 (9%)
Query: 294 LKFGSKVASGSYGDLYRGTYCSQD--VAIK--VLKPERINSDMQ---KEFAQEVFIMRKV 346
+++ ++ G +G +++G VAIK +L ++M +EF +EVFIM +
Sbjct: 21 IEYEKQIGKGGFGLVHKGRLVKDKSVVAIKSLILGDSEGETEMIEKFQEFQREVFIMSNL 80
Query: 347 RHKNVVQFIGACTKPPSLCIVTEFMSGGSVYDYLHKLKGVFKLPSLLKVAIDVSKGMNYL 406
H N+V+ G PP + V EF+ G +Y L K L++ +D++ G+ Y+
Sbjct: 81 NHPNIVKLYGLMHNPPRM--VMEFVPCGDLYHRLLDKAHPIKWSVKLRLMLDIALGIEYM 138
Query: 407 HQNN--IIHRDLKAANLL---MDEN 426
N I+HRDL++ N+ +DEN
Sbjct: 139 QNQNPPIVHRDLRSPNIFLQSLDEN 163
>pdb|4F1O|A Chain A, Crystal Structure Of The L1180t Mutant Roco4 Kinase Domain
From D. Discoideum Bound To Appcp
Length = 287
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 43/145 (29%), Positives = 75/145 (51%), Gaps = 14/145 (9%)
Query: 294 LKFGSKVASGSYGDLYRGTYCSQD--VAIK--VLKPERINSDMQ---KEFAQEVFIMRKV 346
+++ ++ G +G +++G VAIK +L ++M +EF +EVFIM +
Sbjct: 21 IEYEKQIGKGGFGLVHKGRLVKDKSVVAIKSLILGDSEGETEMIEKFQEFQREVFIMSNL 80
Query: 347 RHKNVVQFIGACTKPPSLCIVTEFMSGGSVYDYLHKLKGVFKLPSLLKVAIDVSKGMNYL 406
H N+V+ G PP + V EF+ G +Y L K L++ +D++ G+ Y+
Sbjct: 81 NHPNIVKLYGLMHNPPRM--VMEFVPCGDLYHRLLDKAHPIKWSVKLRLMLDIALGIEYM 138
Query: 407 HQNN--IIHRDLKAANLL---MDEN 426
N I+HRDL++ N+ +DEN
Sbjct: 139 QNQNPPIVHRDLRSPNIFLQSLDEN 163
>pdb|4GT4|A Chain A, Structure Of Unliganded, Inactive Ror2 Kinase Domain
pdb|4GT4|B Chain B, Structure Of Unliganded, Inactive Ror2 Kinase Domain
Length = 308
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 38/158 (24%), Positives = 76/158 (48%), Gaps = 23/158 (14%)
Query: 288 EIDPKHLKFGSKVASGSYGDLYRGTYC-------SQDVAIKVLKPERINSDMQKEFAQEV 340
EI ++F ++ +G +Y+G +Q VAIK LK ++ +++EF E
Sbjct: 22 EISLSAVRFMEELGEDRFGKVYKGHLFGPAPGEQTQAVAIKTLK-DKAEGPLREEFRHEA 80
Query: 341 FIMRKVRHKNVVQFIGACTKPPSLCIVTEFMSGGSVYDYL---------------HKLKG 385
+ +++H NVV +G TK L ++ + S G ++++L +K
Sbjct: 81 MLRARLQHPNVVCLLGVVTKDQPLSMIFSYCSHGDLHEFLVMRSPHSDVGSTDDDRTVKS 140
Query: 386 VFKLPSLLKVAIDVSKGMNYLHQNNIIHRDLKAANLLM 423
+ P + + ++ GM YL ++++H+DL N+L+
Sbjct: 141 ALEPPDFVHLVAQIAAGMEYLSSHHVVHKDLATRNVLV 178
>pdb|4E1Z|A Chain A, Structure Of Mouse Tyk-2 Complexed To A 3-Aminoindazole
Inhibitor
Length = 291
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 44/147 (29%), Positives = 76/147 (51%), Gaps = 15/147 (10%)
Query: 292 KHLKFGSKVASGSYGDLYRGTYC--------SQDVAIKVLKPERINSDMQKEFAQEVFIM 343
++LK + G +G + YC + VA+K LK E ++ + +E+ I+
Sbjct: 9 RYLKKIRDLGEGHFGKV--SLYCYDPTNDGTGEMVAVKALK-EGCGPQLRSGWQREIEIL 65
Query: 344 RKVRHKNVVQFIGAC--TKPPSLCIVTEFMSGGSVYDYLHKLKGVFKLPSLLKVAIDVSK 401
R + H+++V++ G C S+ +V E++ GS+ DYL + L LL A + +
Sbjct: 66 RTLYHEHIVKYKGCCEDQGEKSVQLVMEYVPLGSLRDYLPR--HCVGLAQLLLFAQQICE 123
Query: 402 GMNYLHQNNIIHRDLKAANLLMDENEV 428
GM YLH + IHR L A N+L+D + +
Sbjct: 124 GMAYLHAQHYIHRALAARNVLLDNDRL 150
>pdb|4E20|A Chain A, Structure Of Mouse Tyk-2 Complexed To A 3-Aminoindazole
Inhibitor
Length = 290
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 44/147 (29%), Positives = 76/147 (51%), Gaps = 15/147 (10%)
Query: 292 KHLKFGSKVASGSYGDLYRGTYC--------SQDVAIKVLKPERINSDMQKEFAQEVFIM 343
++LK + G +G + YC + VA+K LK E ++ + +E+ I+
Sbjct: 8 RYLKKIRDLGEGHFGKV--SLYCYDPTNDGTGEMVAVKALK-EGCGPQLRSGWQREIEIL 64
Query: 344 RKVRHKNVVQFIGAC--TKPPSLCIVTEFMSGGSVYDYLHKLKGVFKLPSLLKVAIDVSK 401
R + H+++V++ G C S+ +V E++ GS+ DYL + L LL A + +
Sbjct: 65 RTLYHEHIVKYKGCCEDQGEKSVQLVMEYVPLGSLRDYLPR--HCVGLAQLLLFAQQICE 122
Query: 402 GMNYLHQNNIIHRDLKAANLLMDENEV 428
GM YLH + IHR L A N+L+D + +
Sbjct: 123 GMAYLHAQHYIHRALAARNVLLDNDRL 149
>pdb|3ZZW|A Chain A, Crystal Structure Of The Kinase Domain Of Ror2
pdb|3ZZW|B Chain B, Crystal Structure Of The Kinase Domain Of Ror2
Length = 289
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 38/158 (24%), Positives = 76/158 (48%), Gaps = 23/158 (14%)
Query: 288 EIDPKHLKFGSKVASGSYGDLYRGTYC-------SQDVAIKVLKPERINSDMQKEFAQEV 340
EI ++F ++ +G +Y+G +Q VAIK LK ++ +++EF E
Sbjct: 5 EISLSAVRFMEELGEDRFGKVYKGHLFGPAPGEQTQAVAIKTLK-DKAEGPLREEFRHEA 63
Query: 341 FIMRKVRHKNVVQFIGACTKPPSLCIVTEFMSGGSVYDYL---------------HKLKG 385
+ +++H NVV +G TK L ++ + S G ++++L +K
Sbjct: 64 MLRARLQHPNVVCLLGVVTKDQPLSMIFSYCSHGDLHEFLVMRSPHSDVGSTDDDRTVKS 123
Query: 386 VFKLPSLLKVAIDVSKGMNYLHQNNIIHRDLKAANLLM 423
+ P + + ++ GM YL ++++H+DL N+L+
Sbjct: 124 ALEPPDFVHLVAQIAAGMEYLSSHHVVHKDLATRNVLV 161
>pdb|1U5Q|A Chain A, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5Q|B Chain B, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5R|A Chain A, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5R|B Chain B, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
Length = 348
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 48/154 (31%), Positives = 81/154 (52%), Gaps = 7/154 (4%)
Query: 277 LKIPNDGTDVWEIDPKHLKFGS--KVASGSYGDLY--RGTYCSQDVAIKVLKPERINSDM 332
LK P+ ++ DP+ L F ++ GS+G +Y R S+ VAIK + S+
Sbjct: 38 LKDPDVAELFFKDDPEKL-FSDLREIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNE 96
Query: 333 Q-KEFAQEVFIMRKVRHKNVVQFIGACTKPPSLCIVTEFMSGGSVYDYLHKLKGVFKLPS 391
+ ++ +EV ++K+RH N +Q+ G + + +V E+ G S D L K +
Sbjct: 97 KWQDIIKEVRFLQKLRHPNTIQYRGCYLREHTAWLVMEYCLG-SASDLLEVHKKPLQEVE 155
Query: 392 LLKVAIDVSKGMNYLHQNNIIHRDLKAANLLMDE 425
+ V +G+ YLH +N+IHRD+KA N+L+ E
Sbjct: 156 IAAVTHGALQGLAYLHSHNMIHRDVKAGNILLSE 189
>pdb|4BC6|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
Bound To Novel Bosutinib Isoform 1, Previously Thought
To Be Bosutinib
Length = 293
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 40/148 (27%), Positives = 69/148 (46%), Gaps = 7/148 (4%)
Query: 276 HLKIPNDGTDVWEIDPKHLKFGSKVASGSYGDLYRGTYCSQDVAIKVLKPERINSDMQKE 335
H++ D +VWEI ++ G++G +Y+ E + + ++
Sbjct: 2 HVRRDLDPNEVWEI-------VGELGDGAFGKVYKAKNKETGALAAAKVIETKSEEELED 54
Query: 336 FAQEVFIMRKVRHKNVVQFIGACTKPPSLCIVTEFMSGGSVYDYLHKLKGVFKLPSLLKV 395
+ E+ I+ H +V+ +GA L I+ EF GG+V + +L P + V
Sbjct: 55 YIVEIEILATCDHPYIVKLLGAYYHDGKLWIMIEFCPGGAVDAIMLELDRGLTEPQIQVV 114
Query: 396 AIDVSKGMNYLHQNNIIHRDLKAANLLM 423
+ + +N+LH IIHRDLKA N+LM
Sbjct: 115 CRQMLEALNFLHSKRIIHRDLKAGNVLM 142
>pdb|3H9R|A Chain A, Crystal Structure Of The Kinase Domain Of Type I Activin
Receptor (Acvr1) In Complex With Fkbp12 And Dorsomorphin
Length = 330
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 41/150 (27%), Positives = 77/150 (51%), Gaps = 19/150 (12%)
Query: 300 VASGSYGDLYRGTYCSQDVAIKVLKPERINSDMQKEFAQ-EVFIMRKVRHKNVVQFIGAC 358
V G YG+++RG++ ++VA+K+ + D + F + E++ +RH+N++ FI +
Sbjct: 45 VGKGRYGEVWRGSWQGENVAVKIFS----SRDEKSWFRETELYNTVMLRHENILGFIASD 100
Query: 359 T----KPPSLCIVTEFMSGGSVYDYLHKLKGVFKLPSLLKVAIDVSKGMNYLH------- 407
L ++T + GS+YDYL S L++ + ++ G+ +LH
Sbjct: 101 MTSRHSSTQLWLITHYHEMGSLYDYLQLT--TLDTVSCLRIVLSIASGLAHLHIEIFGTQ 158
Query: 408 -QNNIIHRDLKAANLLMDENEVSLLLSLCL 436
+ I HRDLK+ N+L+ +N + L L
Sbjct: 159 GKPAIAHRDLKSKNILVKKNGQCCIADLGL 188
>pdb|3MTF|A Chain A, Crystal Structure Of The Acvr1 Kinase In Complex With A 2-
Aminopyridine Inhibitor
pdb|3MTF|B Chain B, Crystal Structure Of The Acvr1 Kinase In Complex With A 2-
Aminopyridine Inhibitor
pdb|3OOM|A Chain A, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With The Imidazo[1,2-B]pyridazine Inhibitor K00507
pdb|3Q4U|A Chain A, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
pdb|3Q4U|B Chain B, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
pdb|3Q4U|C Chain C, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
pdb|3Q4U|D Chain D, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
Length = 301
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 41/150 (27%), Positives = 77/150 (51%), Gaps = 19/150 (12%)
Query: 300 VASGSYGDLYRGTYCSQDVAIKVLKPERINSDMQKEFAQ-EVFIMRKVRHKNVVQFIGAC 358
V G YG+++RG++ ++VA+K+ + D + F + E++ +RH+N++ FI +
Sbjct: 16 VGKGRYGEVWRGSWQGENVAVKIFS----SRDEKSWFRETELYNTVMLRHENILGFIASD 71
Query: 359 T----KPPSLCIVTEFMSGGSVYDYLHKLKGVFKLPSLLKVAIDVSKGMNYLH------- 407
L ++T + GS+YDYL S L++ + ++ G+ +LH
Sbjct: 72 MTSRHSSTQLWLITHYHEMGSLYDYLQLT--TLDTVSCLRIVLSIASGLAHLHIEIFGTQ 129
Query: 408 -QNNIIHRDLKAANLLMDENEVSLLLSLCL 436
+ I HRDLK+ N+L+ +N + L L
Sbjct: 130 GKPAIAHRDLKSKNILVKKNGQCCIADLGL 159
>pdb|4APC|A Chain A, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
pdb|4APC|B Chain B, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
pdb|4B9D|A Chain A, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
With Inhibitor.
pdb|4B9D|B Chain B, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
With Inhibitor
Length = 350
Score = 63.5 bits (153), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 35/131 (26%), Positives = 73/131 (55%), Gaps = 3/131 (2%)
Query: 299 KVASGSYGD--LYRGTYCSQDVAIKVLKPERINSDMQKEFAQEVFIMRKVRHKNVVQFIG 356
K+ GS+G L + T + IK + R++S ++E +EV ++ ++H N+VQ+
Sbjct: 31 KIGEGSFGKAILVKSTEDGRQYVIKEINISRMSSKEREESRREVAVLANMKHPNIVQYRE 90
Query: 357 ACTKPPSLCIVTEFMSGGSVYDYLHKLKGV-FKLPSLLKVAIDVSKGMNYLHQNNIIHRD 415
+ + SL IV ++ GG ++ ++ KGV F+ +L + + + ++H I+HRD
Sbjct: 91 SFEENGSLYIVMDYCEGGDLFKRINAQKGVLFQEDQILDWFVQICLALKHVHDRKILHRD 150
Query: 416 LKAANLLMDEN 426
+K+ N+ + ++
Sbjct: 151 IKSQNIFLTKD 161
>pdb|4DYM|A Chain A, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With The Imidazo[1,2-B]pyridazine Inhibitor K00135
Length = 301
Score = 63.5 bits (153), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 41/150 (27%), Positives = 77/150 (51%), Gaps = 19/150 (12%)
Query: 300 VASGSYGDLYRGTYCSQDVAIKVLKPERINSDMQKEFAQ-EVFIMRKVRHKNVVQFIGAC 358
V G YG+++RG++ ++VA+K+ + D + F + E++ +RH+N++ FI +
Sbjct: 16 VGKGRYGEVWRGSWQGENVAVKIFS----SRDEKSWFRETELYNTVMLRHENILGFIASD 71
Query: 359 T----KPPSLCIVTEFMSGGSVYDYLHKLKGVFKLPSLLKVAIDVSKGMNYLH------- 407
L ++T + GS+YDYL S L++ + ++ G+ +LH
Sbjct: 72 MTSRHSSTQLWLITHYHEMGSLYDYLQLT--TLDTVSCLRIVLSIASGLAHLHIEIFGTQ 129
Query: 408 -QNNIIHRDLKAANLLMDENEVSLLLSLCL 436
+ I HRDLK+ N+L+ +N + L L
Sbjct: 130 GKPAIAHRDLKSKNILVKKNGQCCIADLGL 159
>pdb|2GCD|A Chain A, Tao2 Kinase Domain-Staurosporine Structure
pdb|2GCD|B Chain B, Tao2 Kinase Domain-Staurosporine Structure
Length = 309
Score = 63.5 bits (153), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 41/130 (31%), Positives = 70/130 (53%), Gaps = 4/130 (3%)
Query: 299 KVASGSYGDLY--RGTYCSQDVAIKVLKPERINSDMQ-KEFAQEVFIMRKVRHKNVVQFI 355
++ GS+G +Y R S+ VAIK + S+ + ++ +EV ++K+RH N +Q+
Sbjct: 22 EIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQKLRHPNTIQYR 81
Query: 356 GACTKPPSLCIVTEFMSGGSVYDYLHKLKGVFKLPSLLKVAIDVSKGMNYLHQNNIIHRD 415
G + + +V E+ G S D L K + + V +G+ YLH +N+IHRD
Sbjct: 82 GCYLREHTAWLVMEYCLG-SASDLLEVHKKPLQEVEIAAVTHGALQGLAYLHSHNMIHRD 140
Query: 416 LKAANLLMDE 425
+KA N+L+ E
Sbjct: 141 VKAGNILLSE 150
>pdb|2QKW|B Chain B, Structural Basis For Activation Of Plant Immunity By
Bacterial Effector Protein Avrpto
Length = 321
Score = 62.8 bits (151), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 42/137 (30%), Positives = 75/137 (54%), Gaps = 14/137 (10%)
Query: 300 VASGSYGDLYRGTYC-SQDVAIKVLKPERINSDMQKEFAQEVFIMRKVRHKNVVQFIGAC 358
+ G +G +Y+G VA+K PE +S +EF E+ + RH ++V IG C
Sbjct: 47 IGHGVFGKVYKGVLRDGAKVALKRRTPE--SSQGIEEFETEIETLSFCRHPHLVSLIGFC 104
Query: 359 TKPPSLCIVTEFMSGGSVYDYLHKLKGVFKLPSL-------LKVAIDVSKGMNYLHQNNI 411
+ + ++ ++M G++ +L+ LP++ L++ I ++G++YLH I
Sbjct: 105 DERNEMILIYKYMENGNLKRHLYG----SDLPTMSMSWEQRLEICIGAARGLHYLHTRAI 160
Query: 412 IHRDLKAANLLMDENEV 428
IHRD+K+ N+L+DEN V
Sbjct: 161 IHRDVKSINILLDENFV 177
>pdb|3HGK|A Chain A, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|B Chain B, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|C Chain C, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|D Chain D, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
Length = 327
Score = 62.8 bits (151), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 42/137 (30%), Positives = 75/137 (54%), Gaps = 14/137 (10%)
Query: 300 VASGSYGDLYRGTYC-SQDVAIKVLKPERINSDMQKEFAQEVFIMRKVRHKNVVQFIGAC 358
+ G +G +Y+G VA+K PE +S +EF E+ + RH ++V IG C
Sbjct: 47 IGHGVFGKVYKGVLRDGAKVALKRRTPE--SSQGIEEFETEIETLSFCRHPHLVSLIGFC 104
Query: 359 TKPPSLCIVTEFMSGGSVYDYLHKLKGVFKLPSL-------LKVAIDVSKGMNYLHQNNI 411
+ + ++ ++M G++ +L+ LP++ L++ I ++G++YLH I
Sbjct: 105 DERNEMILIYKYMENGNLKRHLYG----SDLPTMSMSWEQRLEICIGAARGLHYLHTRAI 160
Query: 412 IHRDLKAANLLMDENEV 428
IHRD+K+ N+L+DEN V
Sbjct: 161 IHRDVKSINILLDENFV 177
>pdb|3LMG|A Chain A, Crystal Structure Of The Erbb3 Kinase Domain In Complex
With Amp-Pnp
pdb|3LMG|B Chain B, Crystal Structure Of The Erbb3 Kinase Domain In Complex
With Amp-Pnp
Length = 344
Score = 62.8 bits (151), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 32/129 (24%), Positives = 70/129 (54%), Gaps = 6/129 (4%)
Query: 300 VASGSYGDLYRGTYCSQDVAIKVLKPERINSDMQ-----KEFAQEVFIMRKVRHKNVVQF 354
+ SG +G +++G + + +IK+ ++ D + + + + H ++V+
Sbjct: 39 LGSGVFGTVHKGVWIPEGESIKIPVCIKVIEDKSGRQSFQAVTDHMLAIGSLDHAHIVRL 98
Query: 355 IGACTKPPSLCIVTEFMSGGSVYDYLHKLKGVFKLPSLLKVAIDVSKGMNYLHQNNIIHR 414
+G C SL +VT+++ GS+ D++ + +G LL + ++KGM YL ++ ++HR
Sbjct: 99 LGLCPGS-SLQLVTQYLPLGSLLDHVRQHRGALGPQLLLNWGVQIAKGMYYLEEHGMVHR 157
Query: 415 DLKAANLLM 423
+L A N+L+
Sbjct: 158 NLAARNVLL 166
>pdb|4FL2|A Chain A, Structural And Biophysical Characterization Of The Syk
Activation Switch
Length = 636
Score = 62.4 bits (150), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 52/183 (28%), Positives = 90/183 (49%), Gaps = 22/183 (12%)
Query: 253 WPSHRSSSPTSEPEDTGMKSHPYHLKIPNDGTDVWEIDPKHLKFGSKV--------ASGS 304
W + + + P DT + PY D EI PK + K+ SG+
Sbjct: 331 WAADKGPQREALPMDTEVYESPY--------ADPEEIRPKEVYLDRKLLTLEDKELGSGN 382
Query: 305 YGDLYRGTY----CSQDVAIKVLKPERINSDMQKEFAQEVFIMRKVRHKNVVQFIGACTK 360
+G + +G Y + VA+K+LK E + ++ E E +M+++ + +V+ IG C +
Sbjct: 383 FGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRMIGIC-E 441
Query: 361 PPSLCIVTEFMSGGSVYDYLHKLKGVFKLPSLLKVAIDVSKGMNYLHQNNIIHRDLKAAN 420
S +V E G + YL + + V K +++++ VS GM YL ++N +HRDL A N
Sbjct: 442 AESWMLVMEMAELGPLNKYLQQNRHV-KDKNIIELVHQVSMGMKYLEESNFVHRDLAARN 500
Query: 421 LLM 423
+L+
Sbjct: 501 VLL 503
>pdb|3Q4T|A Chain A, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dorsomorphin
pdb|3Q4T|B Chain B, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dorsomorphin
pdb|3SOC|A Chain A, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With A Quinazolin
pdb|3SOC|B Chain B, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With A Quinazolin
pdb|4ASX|A Chain A, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dihydro-Bauerine C
pdb|4ASX|B Chain B, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dihydro-Bauerine C
Length = 322
Score = 62.4 bits (150), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 45/159 (28%), Positives = 83/159 (52%), Gaps = 26/159 (16%)
Query: 301 ASGSYGDLYRGTYCSQDVAIKVLKPERINSDMQKEFAQEVFIMRKVRHKNVVQFIGACTK 360
A G +G +++ ++ VA+K+ P + Q E+ EV+ + ++H+N++QFIGA +
Sbjct: 33 ARGRFGCVWKAQLLNEYVAVKIF-PIQDKQSWQNEY--EVYSLPGMKHENILQFIGAEKR 89
Query: 361 PPS----LCIVTEFMSGGSVYDYLHKLKGVFKLPSLLKVAIDVSKGMNYLHQN------- 409
S L ++T F GS+ D+L V L +A +++G+ YLH++
Sbjct: 90 GTSVDVDLWLITAFHEKGSLSDFLK--ANVVSWNELCHIAETMARGLAYLHEDIPGLKDG 147
Query: 410 ---NIIHRDLKAANLLMDENEVSLLLSLCL--FTVSILF 443
I HRD+K+ N+L+ N L+ C+ F +++ F
Sbjct: 148 HKPAISHRDIKSKNVLLKNN-----LTACIADFGLALKF 181
>pdb|3KEX|A Chain A, Crystal Structure Of The Catalytically Inactive Kinase
Domain Of The Human Epidermal Growth Factor Receptor 3
(Her3)
pdb|3KEX|B Chain B, Crystal Structure Of The Catalytically Inactive Kinase
Domain Of The Human Epidermal Growth Factor Receptor 3
(Her3)
Length = 325
Score = 62.4 bits (150), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 32/129 (24%), Positives = 70/129 (54%), Gaps = 6/129 (4%)
Query: 300 VASGSYGDLYRGTYCSQDVAIKVLKPERINSDMQ-----KEFAQEVFIMRKVRHKNVVQF 354
+ SG +G +++G + + +IK+ ++ D + + + + H ++V+
Sbjct: 21 LGSGVFGTVHKGVWIPEGESIKIPVCIKVIEDKSGRQSFQAVTDHMLAIGSLDHAHIVRL 80
Query: 355 IGACTKPPSLCIVTEFMSGGSVYDYLHKLKGVFKLPSLLKVAIDVSKGMNYLHQNNIIHR 414
+G C SL +VT+++ GS+ D++ + +G LL + ++KGM YL ++ ++HR
Sbjct: 81 LGLCPGS-SLQLVTQYLPLGSLLDHVRQHRGALGPQLLLNWGVQIAKGMYYLEEHGMVHR 139
Query: 415 DLKAANLLM 423
+L A N+L+
Sbjct: 140 NLAARNVLL 148
>pdb|3A60|A Chain A, Crystal Structure Of Unphosphorylated P70s6k1 (Form I)
pdb|3A60|B Chain B, Crystal Structure Of Unphosphorylated P70s6k1 (Form I)
pdb|3A61|A Chain A, Crystal Structure Of Unphosphorylated P70s6k1 (Form Ii)
Length = 327
Score = 62.4 bits (150), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 48/172 (27%), Positives = 83/172 (48%), Gaps = 15/172 (8%)
Query: 288 EIDPKHLKFGSKVASGSYGDLYR-----GTYCSQDVAIKVLKPERI--NSDMQKEFAQEV 340
+I P+ + + G YG +++ G + A+KVLK I N+ E
Sbjct: 13 KIRPECFELLRVLGKGGYGKVFQVRKVTGANTGKIFAMKVLKKAMIVRNAKDTAHTKAER 72
Query: 341 FIMRKVRHKNVVQFIGACTKPPSLCIVTEFMSGGSVYDYLHKLKGVFKLPSLLKVAIDVS 400
I+ +V+H +V I A L ++ E++SGG ++ L + +G+F + ++S
Sbjct: 73 NILEEVKHPFIVDLIYAFQTGGKLYLILEYLSGGELFMQLER-EGIFMEDTACFYLAEIS 131
Query: 401 KGMNYLHQNNIIHRDLKAANLLMD-ENEVSLL-LSLCL-----FTVSILFCG 445
+ +LHQ II+RDLK N++++ + V L LC TV+ FCG
Sbjct: 132 MALGHLHQKGIIYRDLKPENIMLNHQGHVKLTDFGLCKESIHDGTVTHTFCG 183
>pdb|3A62|A Chain A, Crystal Structure Of Phosphorylated P70s6k1
Length = 327
Score = 62.4 bits (150), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 48/172 (27%), Positives = 83/172 (48%), Gaps = 15/172 (8%)
Query: 288 EIDPKHLKFGSKVASGSYGDLYR-----GTYCSQDVAIKVLKPERI--NSDMQKEFAQEV 340
+I P+ + + G YG +++ G + A+KVLK I N+ E
Sbjct: 13 KIRPECFELLRVLGKGGYGKVFQVRKVTGANTGKIFAMKVLKKAMIVRNAKDTAHTKAER 72
Query: 341 FIMRKVRHKNVVQFIGACTKPPSLCIVTEFMSGGSVYDYLHKLKGVFKLPSLLKVAIDVS 400
I+ +V+H +V I A L ++ E++SGG ++ L + +G+F + ++S
Sbjct: 73 NILEEVKHPFIVDLIYAFQTGGKLYLILEYLSGGELFMQLER-EGIFMEDTACFYLAEIS 131
Query: 401 KGMNYLHQNNIIHRDLKAANLLMD-ENEVSLL-LSLCL-----FTVSILFCG 445
+ +LHQ II+RDLK N++++ + V L LC TV+ FCG
Sbjct: 132 MALGHLHQKGIIYRDLKPENIMLNHQGHVKLTDFGLCKESIHDGTVTHXFCG 183
>pdb|3BHY|A Chain A, Crystal Structure Of Human Death Associated Protein Kinase
3 (Dapk3) In Complex With A Beta-Carboline Ligand
pdb|3BQR|A Chain A, Crystal Structure Of Human Death Associated Protein Kinase
3 (Dapk3) In Complex With An Imidazo-Pyridazine Ligand
Length = 283
Score = 62.0 bits (149), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 42/157 (26%), Positives = 81/157 (51%), Gaps = 12/157 (7%)
Query: 293 HLKFGSKVASGSYGDLY--RGTYCSQDVAIKVLKPERINSDMQ----KEFAQEVFIMRKV 346
H + G ++ SG + + R ++ A K +K R++S + +E +EV I+R++
Sbjct: 6 HYEMGEELGSGQFAIVRKCRQKGTGKEYAAKFIKKRRLSSSRRGVSREEIEREVNILREI 65
Query: 347 RHKNVVQFIGACTKPPSLCIVTEFMSGGSVYDYLHKLKGVF--KLPSLLKVAIDVSKGMN 404
RH N++ + ++ E +SGG ++D+L + + + + LK +D G++
Sbjct: 66 RHPNIITLHDIFENKTDVVLILELVSGGELFDFLAEKESLTEDEATQFLKQILD---GVH 122
Query: 405 YLHQNNIIHRDLKAAN-LLMDENEVSLLLSLCLFTVS 440
YLH I H DLK N +L+D+N + + L F ++
Sbjct: 123 YLHSKRIAHFDLKPENIMLLDKNVPNPRIKLIDFGIA 159
>pdb|2JFM|A Chain A, Crystal Structure Of Human Ste20-Like Kinase (Unliganded
Form)
Length = 325
Score = 62.0 bits (149), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 41/143 (28%), Positives = 68/143 (47%), Gaps = 15/143 (10%)
Query: 285 DVWEIDPKHLKFGSKVASGSYGDLYRGTYCSQDVAIKVLKPERINSDMQKE----FAQEV 340
D WEI ++ G++G +Y+ +Q+ VL ++ +E + E+
Sbjct: 37 DFWEI-------IGELGDGAFGKVYK----AQNKETSVLAAAKVIDTKSEEELEDYMVEI 85
Query: 341 FIMRKVRHKNVVQFIGACTKPPSLCIVTEFMSGGSVYDYLHKLKGVFKLPSLLKVAIDVS 400
I+ H N+V+ + A +L I+ EF +GG+V + +L+ + V
Sbjct: 86 DILASCDHPNIVKLLDAFYYENNLWILIEFCAGGAVDAVMLELERPLTESQIQVVCKQTL 145
Query: 401 KGMNYLHQNNIIHRDLKAANLLM 423
+NYLH N IIHRDLKA N+L
Sbjct: 146 DALNYLHDNKIIHRDLKAGNILF 168
>pdb|2JFL|A Chain A, Crystal Structure Of Human Ste20-Like Kinase (
Diphosphorylated Form) Bound To 5- Amino-3-((4-(
Aminosulfonyl)phenyl)amino)-N-(2,6-
Difluorophenyl)-1h-1,2, 4-Triazole-1-Carbothioamide
Length = 325
Score = 62.0 bits (149), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 41/143 (28%), Positives = 68/143 (47%), Gaps = 15/143 (10%)
Query: 285 DVWEIDPKHLKFGSKVASGSYGDLYRGTYCSQDVAIKVLKPERINSDMQKE----FAQEV 340
D WEI ++ G++G +Y+ +Q+ VL ++ +E + E+
Sbjct: 37 DFWEI-------IGELGDGAFGKVYK----AQNKETSVLAAAKVIDTKSEEELEDYMVEI 85
Query: 341 FIMRKVRHKNVVQFIGACTKPPSLCIVTEFMSGGSVYDYLHKLKGVFKLPSLLKVAIDVS 400
I+ H N+V+ + A +L I+ EF +GG+V + +L+ + V
Sbjct: 86 DILASCDHPNIVKLLDAFYYENNLWILIEFCAGGAVDAVMLELERPLTESQIQVVCKQTL 145
Query: 401 KGMNYLHQNNIIHRDLKAANLLM 423
+NYLH N IIHRDLKA N+L
Sbjct: 146 DALNYLHDNKIIHRDLKAGNILF 168
>pdb|2J51|A Chain A, Crystal Structure Of Human Ste20-Like Kinase Bound To 5-
Amino-3-((4-(Aminosulfonyl)phenyl)amino)-N-(2,6-
Difluorophenyl)-1h-1,2,4-Triazole-1-Carbothioamide
Length = 325
Score = 62.0 bits (149), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 41/143 (28%), Positives = 68/143 (47%), Gaps = 15/143 (10%)
Query: 285 DVWEIDPKHLKFGSKVASGSYGDLYRGTYCSQDVAIKVLKPERINSDMQKE----FAQEV 340
D WEI ++ G++G +Y+ +Q+ VL ++ +E + E+
Sbjct: 37 DFWEI-------IGELGDGAFGKVYK----AQNKETSVLAAAKVIDTKSEEELEDYMVEI 85
Query: 341 FIMRKVRHKNVVQFIGACTKPPSLCIVTEFMSGGSVYDYLHKLKGVFKLPSLLKVAIDVS 400
I+ H N+V+ + A +L I+ EF +GG+V + +L+ + V
Sbjct: 86 DILASCDHPNIVKLLDAFYYENNLWILIEFCAGGAVDAVMLELERPLTESQIQVVCKQTL 145
Query: 401 KGMNYLHQNNIIHRDLKAANLLM 423
+NYLH N IIHRDLKA N+L
Sbjct: 146 DALNYLHDNKIIHRDLKAGNILF 168
>pdb|1YRP|A Chain A, Catalytic Domain Of Human Zip Kinase Phosphorylated At
Thr265
pdb|1YRP|B Chain B, Catalytic Domain Of Human Zip Kinase Phosphorylated At
Thr265
Length = 278
Score = 62.0 bits (149), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 42/157 (26%), Positives = 81/157 (51%), Gaps = 12/157 (7%)
Query: 293 HLKFGSKVASGSYGDLY--RGTYCSQDVAIKVLKPERINSDMQ----KEFAQEVFIMRKV 346
H + G ++ SG + + R ++ A K +K R++S + +E +EV I+R++
Sbjct: 13 HYEMGEELGSGQFAIVRKCRQKGTGKEYAAKFIKKRRLSSSRRGVSREEIEREVNILREI 72
Query: 347 RHKNVVQFIGACTKPPSLCIVTEFMSGGSVYDYLHKLKGVF--KLPSLLKVAIDVSKGMN 404
RH N++ + ++ E +SGG ++D+L + + + + LK +D G++
Sbjct: 73 RHPNIITLHDIFENKTDVVLILELVSGGELFDFLAEKESLTEDEATQFLKQILD---GVH 129
Query: 405 YLHQNNIIHRDLKAAN-LLMDENEVSLLLSLCLFTVS 440
YLH I H DLK N +L+D+N + + L F ++
Sbjct: 130 YLHSKRIAHFDLKPENIMLLDKNVPNPRIKLIDFGIA 166
>pdb|3Q6W|A Chain A, Structure Of Dually-phosphorylated Met Receptor Kinase In
Complex With An Mk-2461 Analog With Specificity For The
Activated Receptor
pdb|3R7O|A Chain A, Structure Of Dually Phosphorylated C-Met Receptor Kinase
In Complex With An Mk-2461 Analog
Length = 307
Score = 62.0 bits (149), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 45/162 (27%), Positives = 71/162 (43%), Gaps = 19/162 (11%)
Query: 296 FGSKVASGSYGDLYRGTYCSQD-----VAIKVLKPERINSDMQ-KEFAQEVFIMRKVRHK 349
F + G +G +Y GT D A+K L RI + +F E IM+ H
Sbjct: 33 FNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSL--NRITDIGEVSQFLTEGIIMKDFSHP 90
Query: 350 NVVQFIGACTKPP-SLCIVTEFMSGGSVYDYLHKLKGVFKLPSLLKVAIDVSKGMNYLHQ 408
NV+ +G C + S +V +M G + +++ + L+ + V+KGM YL
Sbjct: 91 NVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKYLAS 150
Query: 409 NNIIHRDLKAANLLMDENEVSLLLSLCLFTVSILFCGKGREL 450
+HRDL A N ++DE FTV + G R++
Sbjct: 151 KKFVHRDLAARNCMLDEK----------FTVKVADFGLARDM 182
>pdb|2G15|A Chain A, Structural Characterization Of Autoinhibited C-Met Kinase
pdb|3RHK|A Chain A, Crystal Structure Of The Catalytic Domain Of C-Met Kinase
In Complex With Arq 197
pdb|3RHK|B Chain B, Crystal Structure Of The Catalytic Domain Of C-Met Kinase
In Complex With Arq 197
Length = 318
Score = 61.6 bits (148), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 45/162 (27%), Positives = 71/162 (43%), Gaps = 19/162 (11%)
Query: 296 FGSKVASGSYGDLYRGTYCSQD-----VAIKVLKPERINSDMQ-KEFAQEVFIMRKVRHK 349
F + G +G +Y GT D A+K L RI + +F E IM+ H
Sbjct: 52 FNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSL--NRITDIGEVSQFLTEGIIMKDFSHP 109
Query: 350 NVVQFIGACTKPP-SLCIVTEFMSGGSVYDYLHKLKGVFKLPSLLKVAIDVSKGMNYLHQ 408
NV+ +G C + S +V +M G + +++ + L+ + V+KGM YL
Sbjct: 110 NVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKYLAS 169
Query: 409 NNIIHRDLKAANLLMDENEVSLLLSLCLFTVSILFCGKGREL 450
+HRDL A N ++DE FTV + G R++
Sbjct: 170 KKFVHRDLAARNCMLDEK----------FTVKVADFGLARDM 201
>pdb|2Z8C|A Chain A, Phosphorylated Insulin Receptor Tyrosine Kinase In Complex
With (4-{[5-Carbamoyl-4-(3-Methylanilino)pyrimidin-2-
Yl]amino}phenyl)acetic Acid
Length = 303
Score = 61.6 bits (148), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 45/182 (24%), Positives = 81/182 (44%), Gaps = 27/182 (14%)
Query: 285 DVWEIDPKHLKFGSKVASGSYGDLYRGTY-------CSQDVAIKVLKPERINSDMQKEFA 337
D WE+ + + ++ GS+G +Y G VA+K + E + + EF
Sbjct: 7 DEWEVSREKITLLRELGQGSFGMVYEGNARDIIKGEAETRVAVKTVN-ESASLRERIEFL 65
Query: 338 QEVFIMRKVRHKNVVQFIGACTKPPSLCIVTEFMSGGSVYDYLHKLKGVFK--------- 388
E +M+ +VV+ +G +K +V E M+ G + YL L+ +
Sbjct: 66 NEASVMKGFTCHHVVRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPT 125
Query: 389 LPSLLKVAIDVSKGMNYLHQNNIIHRDLKAANLLMDENEVSLLLSLCLFTVSILFCGKGR 448
L ++++A +++ GM YL+ +HRDL A N ++ + FTV I G R
Sbjct: 126 LQEMIQMAAEIADGMAYLNAKKFVHRDLAARNCMVAHD----------FTVKIGDFGMTR 175
Query: 449 EL 450
++
Sbjct: 176 DI 177
>pdb|3Q6U|A Chain A, Structure Of The Apo Met Receptor Kinase In The
Dually-Phosphorylated, Activated State
Length = 308
Score = 61.6 bits (148), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 45/162 (27%), Positives = 71/162 (43%), Gaps = 19/162 (11%)
Query: 296 FGSKVASGSYGDLYRGTYCSQD-----VAIKVLKPERINSDMQ-KEFAQEVFIMRKVRHK 349
F + G +G +Y GT D A+K L RI + +F E IM+ H
Sbjct: 34 FNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSL--NRITDIGEVSQFLTEGIIMKDFSHP 91
Query: 350 NVVQFIGACTKPP-SLCIVTEFMSGGSVYDYLHKLKGVFKLPSLLKVAIDVSKGMNYLHQ 408
NV+ +G C + S +V +M G + +++ + L+ + V+KGM YL
Sbjct: 92 NVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKYLAS 151
Query: 409 NNIIHRDLKAANLLMDENEVSLLLSLCLFTVSILFCGKGREL 450
+HRDL A N ++DE FTV + G R++
Sbjct: 152 KKFVHRDLAARNCMLDEK----------FTVKVADFGLARDM 183
>pdb|4BCF|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 331
Score = 61.6 bits (148), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 40/144 (27%), Positives = 76/144 (52%), Gaps = 17/144 (11%)
Query: 298 SKVASGSYGDLYRGTY--CSQDVAIKVLKPERINSDMQKEFAQEVFIMRKVRHKNVVQFI 355
+K+ G++G++++ + Q VA+K + E +E+ I++ ++H+NVV I
Sbjct: 24 AKIGQGTFGEVFKARHRKTGQKVALKKVLMENEKEGFPITALREIKILQLLKHENVVNLI 83
Query: 356 GAC---TKPPSLCIVTEFMSGGSVYDYL-HKLKGV-------FKLPSLLKVAIDVSKGMN 404
C P + C + ++ V+D+ H L G+ F L + +V + G+
Sbjct: 84 EICRTKASPYNRCKASIYL----VFDFCEHDLAGLLSNVLVKFTLSEIKRVMQMLLNGLY 139
Query: 405 YLHQNNIIHRDLKAANLLMDENEV 428
Y+H+N I+HRD+KAAN+L+ + V
Sbjct: 140 YIHRNKILHRDMKAANVLITRDGV 163
>pdb|4GG5|A Chain A, Crystal Structure Of Cmet In Complex With Novel Inhibitor
pdb|4GG7|A Chain A, Crystal Structure Of Cmet In Complex With Novel Inhibitor
Length = 319
Score = 61.6 bits (148), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 45/162 (27%), Positives = 71/162 (43%), Gaps = 19/162 (11%)
Query: 296 FGSKVASGSYGDLYRGTYCSQD-----VAIKVLKPERINSDMQ-KEFAQEVFIMRKVRHK 349
F + G +G +Y GT D A+K L RI + +F E IM+ H
Sbjct: 53 FNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSL--NRITDIGEVSQFLTEGIIMKDFSHP 110
Query: 350 NVVQFIGACTKPP-SLCIVTEFMSGGSVYDYLHKLKGVFKLPSLLKVAIDVSKGMNYLHQ 408
NV+ +G C + S +V +M G + +++ + L+ + V+KGM YL
Sbjct: 111 NVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKYLAS 170
Query: 409 NNIIHRDLKAANLLMDENEVSLLLSLCLFTVSILFCGKGREL 450
+HRDL A N ++DE FTV + G R++
Sbjct: 171 KKFVHRDLAARNCMLDEK----------FTVKVADFGLARDM 202
>pdb|1RQQ|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With The Sh2 Domain Of Aps
pdb|1RQQ|B Chain B, Crystal Structure Of The Insulin Receptor Kinase In
Complex With The Sh2 Domain Of Aps
pdb|2AUH|A Chain A, Crystal Structure Of The Grb14 Bps Region In Complex With
The Insulin Receptor Tyrosine Kinase
pdb|2B4S|B Chain B, Crystal Structure Of A Complex Between Ptp1b And The
Insulin Receptor Tyrosine Kinase
pdb|2B4S|D Chain D, Crystal Structure Of A Complex Between Ptp1b And The
Insulin Receptor Tyrosine Kinase
pdb|3BU3|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With Irs2 Krlb Peptide
pdb|3BU5|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With Irs2 Krlb Peptide And Atp
pdb|3BU6|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With Irs2 Krlb Phosphopeptide
Length = 306
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 45/182 (24%), Positives = 81/182 (44%), Gaps = 27/182 (14%)
Query: 285 DVWEIDPKHLKFGSKVASGSYGDLYRGTY-------CSQDVAIKVLKPERINSDMQKEFA 337
D WE+ + + ++ GS+G +Y G VA+K + E + + EF
Sbjct: 10 DEWEVSREKITLLRELGQGSFGMVYEGNARDIIKGEAETRVAVKTVN-ESASLRERIEFL 68
Query: 338 QEVFIMRKVRHKNVVQFIGACTKPPSLCIVTEFMSGGSVYDYLHKLKGVFK--------- 388
E +M+ +VV+ +G +K +V E M+ G + YL L+ +
Sbjct: 69 NEASVMKGFTCHHVVRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPT 128
Query: 389 LPSLLKVAIDVSKGMNYLHQNNIIHRDLKAANLLMDENEVSLLLSLCLFTVSILFCGKGR 448
L ++++A +++ GM YL+ +HRDL A N ++ + FTV I G R
Sbjct: 129 LQEMIQMAAEIADGMAYLNAKKFVHRDLAARNCMVAHD----------FTVKIGDFGMTR 178
Query: 449 EL 450
++
Sbjct: 179 DI 180
>pdb|3F66|A Chain A, Human C-Met Kinase In Complex With Quinoxaline Inhibitor
pdb|3F66|B Chain B, Human C-Met Kinase In Complex With Quinoxaline Inhibitor
Length = 298
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 45/162 (27%), Positives = 71/162 (43%), Gaps = 19/162 (11%)
Query: 296 FGSKVASGSYGDLYRGTYCSQD-----VAIKVLKPERINSDMQ-KEFAQEVFIMRKVRHK 349
F + G +G +Y GT D A+K L RI + +F E IM+ H
Sbjct: 29 FNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSL--NRITDIGEVSQFLTEGIIMKDFSHP 86
Query: 350 NVVQFIGACTKPP-SLCIVTEFMSGGSVYDYLHKLKGVFKLPSLLKVAIDVSKGMNYLHQ 408
NV+ +G C + S +V +M G + +++ + L+ + V+KGM YL
Sbjct: 87 NVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKYLAS 146
Query: 409 NNIIHRDLKAANLLMDENEVSLLLSLCLFTVSILFCGKGREL 450
+HRDL A N ++DE FTV + G R++
Sbjct: 147 KKFVHRDLAARNCMLDEK----------FTVKVADFGLARDM 178
>pdb|3I5N|A Chain A, Crystal Structure Of C-Met With Triazolopyridazine
Inhibitor 13
pdb|3U6H|A Chain A, Crystal Structure Of C-Met In Complex With Pyrazolone
Inhibitor 26
pdb|3U6I|A Chain A, Crystal Structure Of C-Met In Complex With Pyrazolone
Inhibitor 58a
pdb|4DEG|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridazine Inhibitor 2
pdb|4DEH|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridinone Inhibitor 3
pdb|4DEI|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridinone Inhibitor 24
Length = 309
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 45/162 (27%), Positives = 71/162 (43%), Gaps = 19/162 (11%)
Query: 296 FGSKVASGSYGDLYRGTYCSQD-----VAIKVLKPERINSDMQ-KEFAQEVFIMRKVRHK 349
F + G +G +Y GT D A+K L RI + +F E IM+ H
Sbjct: 33 FNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSL--NRITDIGEVSQFLTEGIIMKDFSHP 90
Query: 350 NVVQFIGACTKPP-SLCIVTEFMSGGSVYDYLHKLKGVFKLPSLLKVAIDVSKGMNYLHQ 408
NV+ +G C + S +V +M G + +++ + L+ + V+KGM YL
Sbjct: 91 NVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKYLAS 150
Query: 409 NNIIHRDLKAANLLMDENEVSLLLSLCLFTVSILFCGKGREL 450
+HRDL A N ++DE FTV + G R++
Sbjct: 151 KKFVHRDLAARNCMLDEK----------FTVKVADFGLARDM 182
>pdb|1IR3|A Chain A, Phosphorylated Insulin Receptor Tyrosine Kinase In Complex
With Peptide Substrate And Atp Analog
pdb|1GAG|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With A Bisubstrate Inhibitor
Length = 306
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 45/182 (24%), Positives = 81/182 (44%), Gaps = 27/182 (14%)
Query: 285 DVWEIDPKHLKFGSKVASGSYGDLYRGTY-------CSQDVAIKVLKPERINSDMQKEFA 337
D WE+ + + ++ GS+G +Y G VA+K + E + + EF
Sbjct: 10 DEWEVSREKITLLRELGQGSFGMVYEGNARDIIKGEAETRVAVKTVN-ESASLRERIEFL 68
Query: 338 QEVFIMRKVRHKNVVQFIGACTKPPSLCIVTEFMSGGSVYDYLHKLKGVFK--------- 388
E +M+ +VV+ +G +K +V E M+ G + YL L+ +
Sbjct: 69 NEASVMKGFTCHHVVRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPT 128
Query: 389 LPSLLKVAIDVSKGMNYLHQNNIIHRDLKAANLLMDENEVSLLLSLCLFTVSILFCGKGR 448
L ++++A +++ GM YL+ +HRDL A N ++ + FTV I G R
Sbjct: 129 LQEMIQMAAEIADGMAYLNAKKFVHRDLAARNCMVAHD----------FTVKIGDFGMTR 178
Query: 449 EL 450
++
Sbjct: 179 DI 180
>pdb|3H4J|B Chain B, Crystal Structure Of Pombe Ampk Kdaid Fragment
pdb|3H4J|A Chain A, Crystal Structure Of Pombe Ampk Kdaid Fragment
Length = 336
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 36/130 (27%), Positives = 71/130 (54%), Gaps = 5/130 (3%)
Query: 300 VASGSYGDLYRGTY--CSQDVAIKVLKPERIN-SDMQKEFAQEVFIMRKVRHKNVVQFIG 356
+ GS+G + T+ Q VA+K + + + SDM +E+ ++ +RH ++++
Sbjct: 17 LGEGSFGKVKLATHYKTQQKVALKFISRQLLKKSDMHMRVEREISYLKLLRHPHIIKLYD 76
Query: 357 ACTKPPSLCIVTEFMSGGSVYDYLHKLKGVFKLPSLLKVAIDVSKGMNYLHQNNIIHRDL 416
T P + +V E+ +GG ++DY+ + K + + + + + Y H++ I+HRDL
Sbjct: 77 VITTPTDIVMVIEY-AGGELFDYIVEKKRMTEDEGR-RFFQQIICAIEYCHRHKIVHRDL 134
Query: 417 KAANLLMDEN 426
K NLL+D+N
Sbjct: 135 KPENLLLDDN 144
>pdb|3LQ8|A Chain A, Structure Of The Kinase Domain Of C-Met Bound To Xl880
(Gsk1
Length = 302
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 45/162 (27%), Positives = 71/162 (43%), Gaps = 19/162 (11%)
Query: 296 FGSKVASGSYGDLYRGTYCSQD-----VAIKVLKPERINSDMQ-KEFAQEVFIMRKVRHK 349
F + G +G +Y GT D A+K L RI + +F E IM+ H
Sbjct: 32 FNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSL--NRITDIGEVSQFLTEGIIMKDFSHP 89
Query: 350 NVVQFIGACTKPP-SLCIVTEFMSGGSVYDYLHKLKGVFKLPSLLKVAIDVSKGMNYLHQ 408
NV+ +G C + S +V +M G + +++ + L+ + V+KGM YL
Sbjct: 90 NVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKYLAS 149
Query: 409 NNIIHRDLKAANLLMDENEVSLLLSLCLFTVSILFCGKGREL 450
+HRDL A N ++DE FTV + G R++
Sbjct: 150 KKFVHRDLAARNCMLDEK----------FTVKVADFGLARDM 181
>pdb|2WD1|A Chain A, Human C-Met Kinase In Complex With Azaindole Inhibitor
Length = 292
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 45/162 (27%), Positives = 71/162 (43%), Gaps = 19/162 (11%)
Query: 296 FGSKVASGSYGDLYRGTYCSQD-----VAIKVLKPERINSDMQ-KEFAQEVFIMRKVRHK 349
F + G +G +Y GT D A+K L RI + +F E IM+ H
Sbjct: 26 FNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSL--NRITDIGEVSQFLTEGIIMKDFSHP 83
Query: 350 NVVQFIGACTKPP-SLCIVTEFMSGGSVYDYLHKLKGVFKLPSLLKVAIDVSKGMNYLHQ 408
NV+ +G C + S +V +M G + +++ + L+ + V+KGM YL
Sbjct: 84 NVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKYLAS 143
Query: 409 NNIIHRDLKAANLLMDENEVSLLLSLCLFTVSILFCGKGREL 450
+HRDL A N ++DE FTV + G R++
Sbjct: 144 KKFVHRDLAARNCMLDEK----------FTVKVADFGLARDM 175
>pdb|2RFN|A Chain A, X-ray Structure Of C-met With Inhibitor.
pdb|2RFN|B Chain B, X-ray Structure Of C-met With Inhibitor.
pdb|2RFS|A Chain A, X-Ray Structure Of Su11274 Bound To C-Met
pdb|3CCN|A Chain A, X-Ray Structure Of C-Met With Triazolopyridazine
Inhibitor.
pdb|3CD8|A Chain A, X-Ray Structure Of C-Met With Triazolopyridazine
Inhibitor.
pdb|3EFJ|A Chain A, Structure Of C-Met With Pyrimidone Inhibitor 7
pdb|3EFJ|B Chain B, Structure Of C-Met With Pyrimidone Inhibitor 7
pdb|3EFK|A Chain A, Structure Of C-Met With Pyrimidone Inhibitor 50
pdb|3EFK|B Chain B, Structure Of C-Met With Pyrimidone Inhibitor 50
Length = 310
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 45/162 (27%), Positives = 71/162 (43%), Gaps = 19/162 (11%)
Query: 296 FGSKVASGSYGDLYRGTYCSQD-----VAIKVLKPERINSDMQ-KEFAQEVFIMRKVRHK 349
F + G +G +Y GT D A+K L RI + +F E IM+ H
Sbjct: 34 FNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSL--NRITDIGEVSQFLTEGIIMKDFSHP 91
Query: 350 NVVQFIGACTKPP-SLCIVTEFMSGGSVYDYLHKLKGVFKLPSLLKVAIDVSKGMNYLHQ 408
NV+ +G C + S +V +M G + +++ + L+ + V+KGM YL
Sbjct: 92 NVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKYLAS 151
Query: 409 NNIIHRDLKAANLLMDENEVSLLLSLCLFTVSILFCGKGREL 450
+HRDL A N ++DE FTV + G R++
Sbjct: 152 KKFVHRDLAARNCMLDEK----------FTVKVADFGLARDM 183
>pdb|2WGJ|A Chain A, X-Ray Structure Of Pf-02341066 Bound To The Kinase Domain
Of C-Met
pdb|2WKM|A Chain A, X-Ray Structure Of Pha-00665752 Bound To The Kinase Domain
Of C-Met
pdb|3ZXZ|A Chain A, X-Ray Structure Of Pf-04217903 Bound To The Kinase Domain
Of C-Met
pdb|3ZZE|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With
N'-
((3z)-4-Chloro-7-Methyl-2-Oxo-1,2-Dihydro-3h-Indol-3-
Ylidene)-2-(4-Hydroxyphenyl)propanohydrazide
pdb|4AOI|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With
4-( 3-((1h-
Pyrrolo(2,3-B)pyridin-3-Yl)methyl)-(1,2,4)triazolo(
4,3-B)(1,2,4) Triazin-6-Yl)benzonitrile
pdb|4AP7|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With
4-( (6-(4-
Fluorophenyl)-(1,2,4)triazolo(4,3-B)(1,2,
4)triazin-3-Yl)methyl) Phenol
Length = 306
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 45/162 (27%), Positives = 71/162 (43%), Gaps = 19/162 (11%)
Query: 296 FGSKVASGSYGDLYRGTYCSQD-----VAIKVLKPERINSDMQ-KEFAQEVFIMRKVRHK 349
F + G +G +Y GT D A+K L RI + +F E IM+ H
Sbjct: 31 FNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSL--NRITDIGEVSQFLTEGIIMKDFSHP 88
Query: 350 NVVQFIGACTKPP-SLCIVTEFMSGGSVYDYLHKLKGVFKLPSLLKVAIDVSKGMNYLHQ 408
NV+ +G C + S +V +M G + +++ + L+ + V+KGM YL
Sbjct: 89 NVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKYLAS 148
Query: 409 NNIIHRDLKAANLLMDENEVSLLLSLCLFTVSILFCGKGREL 450
+HRDL A N ++DE FTV + G R++
Sbjct: 149 KKFVHRDLAARNCMLDEK----------FTVKVADFGLARDM 180
>pdb|2J90|A Chain A, Crystal Structure Of Human Zip Kinase In Complex With A
Tetracyclic Pyridone Inhibitor (pyridone 6)
pdb|2J90|B Chain B, Crystal Structure Of Human Zip Kinase In Complex With A
Tetracyclic Pyridone Inhibitor (pyridone 6)
Length = 304
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 42/157 (26%), Positives = 80/157 (50%), Gaps = 12/157 (7%)
Query: 293 HLKFGSKVASGSYGDLY--RGTYCSQDVAIKVLKPERINSDMQ----KEFAQEVFIMRKV 346
H + G ++ SG + + R ++ A K +K R+ S + +E +EV I+R++
Sbjct: 27 HYEMGEELGSGQFAIVRKCRQKGTGKEYAAKFIKKRRLXSSRRGVSREEIEREVNILREI 86
Query: 347 RHKNVVQFIGACTKPPSLCIVTEFMSGGSVYDYLHKLKGVF--KLPSLLKVAIDVSKGMN 404
RH N++ + ++ E +SGG ++D+L + + + + LK +D G++
Sbjct: 87 RHPNIITLHDIFENKTDVVLILELVSGGELFDFLAEKESLTEDEATQFLKQILD---GVH 143
Query: 405 YLHQNNIIHRDLKAAN-LLMDENEVSLLLSLCLFTVS 440
YLH I H DLK N +L+D+N + + L F ++
Sbjct: 144 YLHSKRIAHFDLKPENIMLLDKNVPNPRIKLIDFGIA 180
>pdb|1IRK|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Human Insulin Receptor
Length = 306
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 45/182 (24%), Positives = 81/182 (44%), Gaps = 27/182 (14%)
Query: 285 DVWEIDPKHLKFGSKVASGSYGDLYRGTY-------CSQDVAIKVLKPERINSDMQKEFA 337
D WE+ + + ++ GS+G +Y G VA+K + E + + EF
Sbjct: 10 DEWEVSREKITLLRELGQGSFGMVYEGNARDIIKGEAETRVAVKTVN-ESASLRERIEFL 68
Query: 338 QEVFIMRKVRHKNVVQFIGACTKPPSLCIVTEFMSGGSVYDYLHKLKGVFK--------- 388
E +M+ +VV+ +G +K +V E M+ G + YL L+ +
Sbjct: 69 NEASVMKGFTCHHVVRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPT 128
Query: 389 LPSLLKVAIDVSKGMNYLHQNNIIHRDLKAANLLMDENEVSLLLSLCLFTVSILFCGKGR 448
L ++++A +++ GM YL+ +HRDL A N ++ + FTV I G R
Sbjct: 129 LQEMIQMAAEIADGMAYLNAKKFVHRDLAARNCMVAHD----------FTVKIGDFGMTR 178
Query: 449 EL 450
++
Sbjct: 179 DI 180
>pdb|1I44|A Chain A, Crystallographic Studies Of An Activation Loop Mutant Of
The Insulin Receptor Tyrosine Kinase
Length = 306
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 45/182 (24%), Positives = 81/182 (44%), Gaps = 27/182 (14%)
Query: 285 DVWEIDPKHLKFGSKVASGSYGDLYRGTY-------CSQDVAIKVLKPERINSDMQKEFA 337
D WE+ + + ++ GS+G +Y G VA+K + E + + EF
Sbjct: 10 DEWEVSREKITLLRELGQGSFGMVYEGNARDIIKGEAETRVAVKTVN-ESASLRERIEFL 68
Query: 338 QEVFIMRKVRHKNVVQFIGACTKPPSLCIVTEFMSGGSVYDYLHKLKGVFK--------- 388
E +M+ +VV+ +G +K +V E M+ G + YL L+ +
Sbjct: 69 NEASVMKGFTCHHVVRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPT 128
Query: 389 LPSLLKVAIDVSKGMNYLHQNNIIHRDLKAANLLMDENEVSLLLSLCLFTVSILFCGKGR 448
L ++++A +++ GM YL+ +HRDL A N ++ + FTV I G R
Sbjct: 129 LQEMIQMAAEIADGMAYLNAKKFVHRDLAARNCMVAHD----------FTVKIGDFGMTR 178
Query: 449 EL 450
++
Sbjct: 179 DI 180
>pdb|4EC8|A Chain A, Structure Of Full Length Cdk9 In Complex With Cyclint And
Drb
pdb|4EC9|A Chain A, Crystal Structure Of Full-Length Cdk9 In Complex With
Cyclin T
Length = 373
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 40/144 (27%), Positives = 76/144 (52%), Gaps = 17/144 (11%)
Query: 298 SKVASGSYGDLYRGTY--CSQDVAIKVLKPERINSDMQKEFAQEVFIMRKVRHKNVVQFI 355
+K+ G++G++++ + Q VA+K + E +E+ I++ ++H+NVV I
Sbjct: 24 AKIGQGTFGEVFKARHRKTGQKVALKKVLMENEKEGFPITALREIKILQLLKHENVVNLI 83
Query: 356 GAC---TKPPSLCIVTEFMSGGSVYDYL-HKLKGV-------FKLPSLLKVAIDVSKGMN 404
C P + C + ++ V+D+ H L G+ F L + +V + G+
Sbjct: 84 EICRTKASPYNRCKGSIYL----VFDFCEHDLAGLLSNVLVKFTLSEIKRVMQMLLNGLY 139
Query: 405 YLHQNNIIHRDLKAANLLMDENEV 428
Y+H+N I+HRD+KAAN+L+ + V
Sbjct: 140 YIHRNKILHRDMKAANVLITRDGV 163
>pdb|3DKG|A Chain A, Sgx Clone 5698a109kfg1h1
Length = 317
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 44/163 (26%), Positives = 72/163 (44%), Gaps = 19/163 (11%)
Query: 296 FGSKVASGSYGDLYRGTYCSQD-----VAIKVLKPERINSDMQ-KEFAQEVFIMRKVRHK 349
F + G +G +Y GT D A+K L RI + +F E IM+ H
Sbjct: 35 FNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSL--NRITDIGEVSQFLTEGIIMKDFSHP 92
Query: 350 NVVQFIGACTKPP-SLCIVTEFMSGGSVYDYLHKLKGVFKLPSLLKVAIDVSKGMNYLHQ 408
NV+ +G C + S +V +M G + +++ + L+ + V+KGM +L
Sbjct: 93 NVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKFLAS 152
Query: 409 NNIIHRDLKAANLLMDENEVSLLLSLCLFTVSILFCGKGRELI 451
+HRDL A N ++DE FTV + G R+++
Sbjct: 153 KKFVHRDLAARNCMLDEK----------FTVKVADFGLARDML 185
>pdb|3KU2|A Chain A, Crystal Structure Of Inactivated Form Of Cdpk1 From
Toxoplasma Gondii, Tgme49.101440
Length = 507
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 38/147 (25%), Positives = 72/147 (48%), Gaps = 4/147 (2%)
Query: 300 VASGSYGD--LYRGTYCSQDVAIKVLKPERINSDMQKE-FAQEVFIMRKVRHKNVVQFIG 356
+ GS+G+ L + Q+ A+KV+ ++ KE +EV +++++ H N+++
Sbjct: 57 LGKGSFGEVILCKDKITGQECAVKVISKRQVKQKTDKESLLREVQLLKQLDHPNIMKLYE 116
Query: 357 ACTKPPSLCIVTEFMSGGSVYDYLHKLKGVFKLPSLLKVAIDVSKGMNYLHQNNIIHRDL 416
+V E +GG ++D + K F ++ V G+ Y+H+N I+HRDL
Sbjct: 117 FFEDKGYFYLVGEVYTGGELFDEIISRK-RFSEVDAARIIRQVLSGITYMHKNKIVHRDL 175
Query: 417 KAANLLMDENEVSLLLSLCLFTVSILF 443
K NLL++ + + F +S F
Sbjct: 176 KPENLLLESKSKDANIRIIDFGLSTHF 202
>pdb|3HX4|A Chain A, Crystal Structure Of Cdpk1 Of Toxoplasma Gondii,
Tgme49_101440, In Presence Of Calcium
Length = 508
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 38/147 (25%), Positives = 72/147 (48%), Gaps = 4/147 (2%)
Query: 300 VASGSYGD--LYRGTYCSQDVAIKVLKPERINSDMQKE-FAQEVFIMRKVRHKNVVQFIG 356
+ GS+G+ L + Q+ A+KV+ ++ KE +EV +++++ H N+++
Sbjct: 58 LGKGSFGEVILCKDKITGQECAVKVISKRQVKQKTDKESLLREVQLLKQLDHPNIMKLYE 117
Query: 357 ACTKPPSLCIVTEFMSGGSVYDYLHKLKGVFKLPSLLKVAIDVSKGMNYLHQNNIIHRDL 416
+V E +GG ++D + K F ++ V G+ Y+H+N I+HRDL
Sbjct: 118 FFEDKGYFYLVGEVYTGGELFDEIISRK-RFSEVDAARIIRQVLSGITYMHKNKIVHRDL 176
Query: 417 KAANLLMDENEVSLLLSLCLFTVSILF 443
K NLL++ + + F +S F
Sbjct: 177 KPENLLLESKSKDANIRIIDFGLSTHF 203
>pdb|3BLH|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1
pdb|3BLQ|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1 IN COMPLEX WITH
ATP
pdb|3BLR|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1 IN COMPLEX WITH
Flavopiridol
pdb|3MY1|A Chain A, Structure Of Cdk9CYCLINT1 IN COMPLEX WITH DRB
pdb|3LQ5|A Chain A, Structure Of Cdk9CYCLINT IN COMPLEX WITH S-Cr8
pdb|3TN8|A Chain A, Cdk9CYCLIN T IN COMPLEX WITH CAN508
pdb|3TNH|A Chain A, Cdk9CYCLIN T IN COMPLEX WITH CAN508
pdb|3TNI|A Chain A, Structure Of Cdk9CYCLIN T F241L
pdb|4BCH|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCI|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCJ|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 331
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 40/144 (27%), Positives = 76/144 (52%), Gaps = 17/144 (11%)
Query: 298 SKVASGSYGDLYRGTY--CSQDVAIKVLKPERINSDMQKEFAQEVFIMRKVRHKNVVQFI 355
+K+ G++G++++ + Q VA+K + E +E+ I++ ++H+NVV I
Sbjct: 24 AKIGQGTFGEVFKARHRKTGQKVALKKVLMENEKEGFPITALREIKILQLLKHENVVNLI 83
Query: 356 GAC---TKPPSLCIVTEFMSGGSVYDYL-HKLKGV-------FKLPSLLKVAIDVSKGMN 404
C P + C + ++ V+D+ H L G+ F L + +V + G+
Sbjct: 84 EICRTKASPYNRCKGSIYL----VFDFCEHDLAGLLSNVLVKFTLSEIKRVMQMLLNGLY 139
Query: 405 YLHQNNIIHRDLKAANLLMDENEV 428
Y+H+N I+HRD+KAAN+L+ + V
Sbjct: 140 YIHRNKILHRDMKAANVLITRDGV 163
>pdb|3MI9|A Chain A, Crystal Structure Of Hiv-1 Tat Complexed With Human P-Tefb
pdb|3MIA|A Chain A, Crystal Structure Of Hiv-1 Tat Complexed With Atp-Bound
Human P-Tefb
Length = 351
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 40/144 (27%), Positives = 76/144 (52%), Gaps = 17/144 (11%)
Query: 298 SKVASGSYGDLYRGTY--CSQDVAIKVLKPERINSDMQKEFAQEVFIMRKVRHKNVVQFI 355
+K+ G++G++++ + Q VA+K + E +E+ I++ ++H+NVV I
Sbjct: 23 AKIGQGTFGEVFKARHRKTGQKVALKKVLMENEKEGFPITALREIKILQLLKHENVVNLI 82
Query: 356 GAC---TKPPSLCIVTEFMSGGSVYDYL-HKLKGV-------FKLPSLLKVAIDVSKGMN 404
C P + C + ++ V+D+ H L G+ F L + +V + G+
Sbjct: 83 EICRTKASPYNRCKGSIYL----VFDFCEHDLAGLLSNVLVKFTLSEIKRVMQMLLNGLY 138
Query: 405 YLHQNNIIHRDLKAANLLMDENEV 428
Y+H+N I+HRD+KAAN+L+ + V
Sbjct: 139 YIHRNKILHRDMKAANVLITRDGV 162
>pdb|3V5Q|A Chain A, Discovery Of A Selective Trk Inhibitor With Efficacy In
Rodent Cancer Tumor Models
pdb|3V5Q|B Chain B, Discovery Of A Selective Trk Inhibitor With Efficacy In
Rodent Cancer Tumor Models
Length = 297
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 45/182 (24%), Positives = 83/182 (45%), Gaps = 27/182 (14%)
Query: 281 NDGTDVWEIDPKHLKFGSKVASGSYGDLYRG-------TYCSQDVAIKVLKPERINSDMQ 333
+ G V I + + ++ G++G ++ T VA+K LK + + +
Sbjct: 4 HSGIHVQHIKRRDIVLKRELGEGAFGKVFLAECYNLSPTKDKMLVAVKALKDPTLAA--R 61
Query: 334 KEFAQEVFIMRKVRHKNVVQFIGACTKPPSLCIVTEFMSGGSVYDYL------------- 380
K+F +E ++ ++H+++V+F G C L +V E+M G + +L
Sbjct: 62 KDFQREAELLTNLQHEHIVKFYGVCGDGDPLIMVFEYMKHGDLNKFLRAHGPDAMILVDG 121
Query: 381 --HKLKGVFKLPSLLKVAIDVSKGMNYLHQNNIIHRDLKAANLLMDENEVSLLLSLCLFT 438
+ KG L +L +A ++ GM YL + +HRDL N L+ N LL+ + F
Sbjct: 122 QPRQAKGELGLSQMLHIASQIASGMVYLASQHFVHRDLATRNCLVGAN---LLVKIGDFG 178
Query: 439 VS 440
+S
Sbjct: 179 MS 180
>pdb|3I79|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1)
pdb|3I7B|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor Nm-Pp1
pdb|3N51|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor
Rm-1-95
pdb|3SX9|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-132
pdb|3SXF|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-89
pdb|3T3U|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-130
pdb|3T3V|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-87
pdb|3UPX|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1300
pdb|3UPZ|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumpless Bki Analog Uw1243
pdb|3V51|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Rm-1-176
pdb|3V5P|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1288
pdb|3V5T|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1299
Length = 484
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 38/147 (25%), Positives = 72/147 (48%), Gaps = 4/147 (2%)
Query: 300 VASGSYGD--LYRGTYCSQDVAIKVLKPERINSDMQKE-FAQEVFIMRKVRHKNVVQFIG 356
+ GS+G+ L + Q+ A+KV+ ++ KE +EV +++++ H N+++
Sbjct: 34 LGKGSFGEVILCKDKITGQECAVKVISKRQVKQKTDKESLLREVQLLKQLDHPNIMKLYE 93
Query: 357 ACTKPPSLCIVTEFMSGGSVYDYLHKLKGVFKLPSLLKVAIDVSKGMNYLHQNNIIHRDL 416
+V E +GG ++D + K F ++ V G+ Y+H+N I+HRDL
Sbjct: 94 FFEDKGYFYLVGEVYTGGELFDEIISRKR-FSEVDAARIIRQVLSGITYMHKNKIVHRDL 152
Query: 417 KAANLLMDENEVSLLLSLCLFTVSILF 443
K NLL++ + + F +S F
Sbjct: 153 KPENLLLESKSKDANIRIIDFGLSTHF 179
>pdb|1R0P|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
The Microbial Alkaloid K-252a
pdb|1R1W|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met
Length = 312
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 44/162 (27%), Positives = 71/162 (43%), Gaps = 19/162 (11%)
Query: 296 FGSKVASGSYGDLYRGTYCSQD-----VAIKVLKPERINSDMQ-KEFAQEVFIMRKVRHK 349
F + G +G +Y GT D A+K L RI + +F E IM+ H
Sbjct: 32 FNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSL--NRITDIGEVSQFLTEGIIMKDFSHP 89
Query: 350 NVVQFIGACTKPP-SLCIVTEFMSGGSVYDYLHKLKGVFKLPSLLKVAIDVSKGMNYLHQ 408
NV+ +G C + S +V +M G + +++ + L+ + V+KGM +L
Sbjct: 90 NVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKFLAS 149
Query: 409 NNIIHRDLKAANLLMDENEVSLLLSLCLFTVSILFCGKGREL 450
+HRDL A N ++DE FTV + G R++
Sbjct: 150 KKFVHRDLAARNCMLDEK----------FTVKVADFGLARDM 181
>pdb|3A4P|A Chain A, Human C-Met Kinase Domain Complexed With
6-Benzyloxyquinoline Inhibitor
Length = 319
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 44/162 (27%), Positives = 71/162 (43%), Gaps = 19/162 (11%)
Query: 296 FGSKVASGSYGDLYRGTYCSQD-----VAIKVLKPERINSDMQ-KEFAQEVFIMRKVRHK 349
F + G +G +Y GT D A+K L RI + +F E IM+ H
Sbjct: 39 FNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSL--NRITDIGEVSQFLTEGIIMKDFSHP 96
Query: 350 NVVQFIGACTKPP-SLCIVTEFMSGGSVYDYLHKLKGVFKLPSLLKVAIDVSKGMNYLHQ 408
NV+ +G C + S +V +M G + +++ + L+ + V+KGM +L
Sbjct: 97 NVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKFLAS 156
Query: 409 NNIIHRDLKAANLLMDENEVSLLLSLCLFTVSILFCGKGREL 450
+HRDL A N ++DE FTV + G R++
Sbjct: 157 KKFVHRDLAARNCMLDEK----------FTVKVADFGLARDM 188
>pdb|3C1X|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Pyrrolotriazine Based Inhibitor
Length = 373
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 44/162 (27%), Positives = 71/162 (43%), Gaps = 19/162 (11%)
Query: 296 FGSKVASGSYGDLYRGTYCSQD-----VAIKVLKPERINSDMQ-KEFAQEVFIMRKVRHK 349
F + G +G +Y GT D A+K L RI + +F E IM+ H
Sbjct: 93 FNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSL--NRITDIGEVSQFLTEGIIMKDFSHP 150
Query: 350 NVVQFIGACTKPP-SLCIVTEFMSGGSVYDYLHKLKGVFKLPSLLKVAIDVSKGMNYLHQ 408
NV+ +G C + S +V +M G + +++ + L+ + V+KGM +L
Sbjct: 151 NVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKFLAS 210
Query: 409 NNIIHRDLKAANLLMDENEVSLLLSLCLFTVSILFCGKGREL 450
+HRDL A N ++DE FTV + G R++
Sbjct: 211 KKFVHRDLAARNCMLDEK----------FTVKVADFGLARDM 242
>pdb|4FL3|A Chain A, Structural And Biophysical Characterization Of The Syk
Activation Switch
Length = 635
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 51/183 (27%), Positives = 90/183 (49%), Gaps = 22/183 (12%)
Query: 253 WPSHRSSSPTSEPEDTGMKSHPYHLKIPNDGTDVWEIDPKHLKFGSKV--------ASGS 304
W + + + P DT + P+ D EI PK + K+ SG+
Sbjct: 330 WAADKGPQREALPMDTEVFESPF--------ADPEEIRPKEVYLDRKLLTLEDKELGSGN 381
Query: 305 YGDLYRGTY----CSQDVAIKVLKPERINSDMQKEFAQEVFIMRKVRHKNVVQFIGACTK 360
+G + +G Y + VA+K+LK E + ++ E E +M+++ + +V+ IG C +
Sbjct: 382 FGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRMIGIC-E 440
Query: 361 PPSLCIVTEFMSGGSVYDYLHKLKGVFKLPSLLKVAIDVSKGMNYLHQNNIIHRDLKAAN 420
S +V E G + YL + + V K +++++ VS GM YL ++N +HRDL A N
Sbjct: 441 AESWMLVMEMAELGPLNKYLQQNRHV-KDKNIIELVHQVSMGMKYLEESNFVHRDLAARN 499
Query: 421 LLM 423
+L+
Sbjct: 500 VLL 502
>pdb|3QTI|A Chain A, C-Met Kinase In Complex With Nvp-Bvu972
pdb|3QTI|B Chain B, C-Met Kinase In Complex With Nvp-Bvu972
Length = 314
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 44/162 (27%), Positives = 71/162 (43%), Gaps = 19/162 (11%)
Query: 296 FGSKVASGSYGDLYRGTYCSQD-----VAIKVLKPERINSDMQ-KEFAQEVFIMRKVRHK 349
F + G +G +Y GT D A+K L RI + +F E IM+ H
Sbjct: 34 FNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSL--NRITDIGEVSQFLTEGIIMKDFSHP 91
Query: 350 NVVQFIGACTKPP-SLCIVTEFMSGGSVYDYLHKLKGVFKLPSLLKVAIDVSKGMNYLHQ 408
NV+ +G C + S +V +M G + +++ + L+ + V+KGM +L
Sbjct: 92 NVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKFLAS 151
Query: 409 NNIIHRDLKAANLLMDENEVSLLLSLCLFTVSILFCGKGREL 450
+HRDL A N ++DE FTV + G R++
Sbjct: 152 KKFVHRDLAARNCMLDEK----------FTVKVADFGLARDM 183
>pdb|3DKC|A Chain A, Sgx Clone 5698a65kfg1h1
pdb|3DKF|A Chain A, Sgx Clone 5698a65kfg1h1
Length = 317
Score = 60.1 bits (144), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 44/162 (27%), Positives = 71/162 (43%), Gaps = 19/162 (11%)
Query: 296 FGSKVASGSYGDLYRGTYCSQD-----VAIKVLKPERINSDMQ-KEFAQEVFIMRKVRHK 349
F + G +G +Y GT D A+K L RI + +F E IM+ H
Sbjct: 35 FNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSL--NRITDIGEVSQFLTEGIIMKDFSHP 92
Query: 350 NVVQFIGACTKPP-SLCIVTEFMSGGSVYDYLHKLKGVFKLPSLLKVAIDVSKGMNYLHQ 408
NV+ +G C + S +V +M G + +++ + L+ + V+KGM +L
Sbjct: 93 NVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKFLAS 152
Query: 409 NNIIHRDLKAANLLMDENEVSLLLSLCLFTVSILFCGKGREL 450
+HRDL A N ++DE FTV + G R++
Sbjct: 153 KKFVHRDLAARNCMLDEK----------FTVKVADFGLARDM 184
>pdb|3CTH|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Aminopyridine Based Inhibitor
pdb|3CTJ|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Aminopyridine Based Inhibitor
pdb|3CE3|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Pyrrolopyridinepyridone Based Inhibitor
pdb|3F82|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
N-
(4-(2-Amino-3-Chloropyridin-4-Yloxy)-3-Fluorophenyl)-4-
Ethoxy-1-(4-Fluorophenyl)-2-Oxo-1,2-Dihydropyridine-3-
Carboxamide
pdb|3L8V|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepat Growth Factor Receptor C-Met In Complex With A
Biarylamine Inhibitor
Length = 314
Score = 60.1 bits (144), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 44/162 (27%), Positives = 71/162 (43%), Gaps = 19/162 (11%)
Query: 296 FGSKVASGSYGDLYRGTYCSQD-----VAIKVLKPERINSDMQ-KEFAQEVFIMRKVRHK 349
F + G +G +Y GT D A+K L RI + +F E IM+ H
Sbjct: 34 FNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSL--NRITDIGEVSQFLTEGIIMKDFSHP 91
Query: 350 NVVQFIGACTKPP-SLCIVTEFMSGGSVYDYLHKLKGVFKLPSLLKVAIDVSKGMNYLHQ 408
NV+ +G C + S +V +M G + +++ + L+ + V+KGM +L
Sbjct: 92 NVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKFLAS 151
Query: 409 NNIIHRDLKAANLLMDENEVSLLLSLCLFTVSILFCGKGREL 450
+HRDL A N ++DE FTV + G R++
Sbjct: 152 KKFVHRDLAARNCMLDEK----------FTVKVADFGLARDM 183
>pdb|4AOJ|A Chain A, Human Trka In Complex With The Inhibitor Az-23
pdb|4AOJ|B Chain B, Human Trka In Complex With The Inhibitor Az-23
pdb|4AOJ|C Chain C, Human Trka In Complex With The Inhibitor Az-23
Length = 329
Score = 60.1 bits (144), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 54/198 (27%), Positives = 93/198 (46%), Gaps = 30/198 (15%)
Query: 255 SHRSSSPTSEPEDTGMKSHPYHLKIPNDGTD--VWEIDPKHLKFGSKVASGSYGDLYRGT 312
S S SPT E + +G++ H ++ P +D V I + + ++ G++G ++
Sbjct: 5 SGSSLSPT-EGKGSGLQGHI--IENPQYFSDACVHHIKRRDIVLKWELGEGAFGKVFLAE 61
Query: 313 YC-----SQD---VAIKVLKPERINSDMQKEFAQEVFIMRKVRHKNVVQFIGACTKPPSL 364
C QD VA+K LK + +++F +E ++ ++H+++V+F G CT+ L
Sbjct: 62 -CHNLLPEQDKMLVAVKALK--EASESARQDFQREAELLTMLQHQHIVRFFGVCTEGRPL 118
Query: 365 CIVTEFMSGGSVYDYLHK--------------LKGVFKLPSLLKVAIDVSKGMNYLHQNN 410
+V E+M G + +L G L LL VA V+ GM YL +
Sbjct: 119 LMVFEYMRHGDLNRFLRSHGPDAKLLAGGEDVAPGPLGLGQLLAVASQVAAGMVYLAGLH 178
Query: 411 IIHRDLKAANLLMDENEV 428
+HRDL N L+ + V
Sbjct: 179 FVHRDLATRNCLVGQGLV 196
>pdb|3Q5I|A Chain A, Crystal Structure Of Pbanka_031420
Length = 504
Score = 60.1 bits (144), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 46/162 (28%), Positives = 82/162 (50%), Gaps = 22/162 (13%)
Query: 299 KVASGSYGD--LYRGTYCSQDVAIKVLKPERI--------NSDMQK---EFAQEVFIMRK 345
K+ SG+YG+ L + + AIKV+K + N +++K E E+ +++
Sbjct: 43 KLGSGAYGEVLLCKEKNGHSEKAIKVIKKSQFDKGRYSDDNKNIEKFHEEIYNEISLLKS 102
Query: 346 VRHKNVVQFIGACTKPPSLCIVTEFMSGGSVYDYL---HKLKGVFKLPSLLKVAIDVSKG 402
+ H N+++ +VTEF GG +++ + HK F + + G
Sbjct: 103 LDHPNIIKLFDVFEDKKYFYLVTEFYEGGELFEQIINRHK----FDECDAANIMKQILSG 158
Query: 403 MNYLHQNNIIHRDLKAANLLMDENEVSLL-LSLCLFTVSILF 443
+ YLH++NI+HRD+K N+L+ EN+ SLL + + F +S F
Sbjct: 159 ICYLHKHNIVHRDIKPENILL-ENKNSLLNIKIVDFGLSSFF 199
>pdb|3HZT|A Chain A, Crystal Structure Of Toxoplasma Gondii Cdpk3,
Tgme49_105860
Length = 467
Score = 60.1 bits (144), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 41/153 (26%), Positives = 74/153 (48%), Gaps = 4/153 (2%)
Query: 299 KVASGSYGD--LYRGTYCSQDVAIKVLKPERINSDMQK-EFAQEVFIMRKVRHKNVVQFI 355
K+ SG+YG+ L + + AIK++K + + EV +++++ H N+++
Sbjct: 11 KLGSGAYGEVLLCKDKLTGAERAIKIIKKSSVTTTSNSGALLDEVAVLKQLDHPNIMKLY 70
Query: 356 GACTKPPSLCIVTEFMSGGSVYDYLHKLKGVFKLPSLLKVAIDVSKGMNYLHQNNIIHRD 415
+ +V E GG ++D + L+ F + V G YLH++NI+HRD
Sbjct: 71 EFFEDKRNYYLVMEVYRGGELFDEII-LRQKFSEVDAAVIMKQVLSGTTYLHKHNIVHRD 129
Query: 416 LKAANLLMDENEVSLLLSLCLFTVSILFCGKGR 448
LK NLL++ L+ + F +S F G+
Sbjct: 130 LKPENLLLESKSRDALIKIVDFGLSAHFEVGGK 162
>pdb|2QLU|A Chain A, Crystal Structure Of Activin Receptor Type Ii Kinase
Domain From Human
Length = 314
Score = 59.7 bits (143), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 44/152 (28%), Positives = 78/152 (51%), Gaps = 22/152 (14%)
Query: 301 ASGSYGDLYRGTYCSQDVAIKVLKPERINSDMQKEFAQEVFIMRKVRHKNVVQFIGACTK 360
A G +G +++ + VA+K+ P + Q E +E+F ++H+N++QFI A +
Sbjct: 24 ARGRFGCVWKAQLMNDFVAVKIF-PLQDKQSWQSE--REIFSTPGMKHENLLQFIAAEKR 80
Query: 361 PPSL----CIVTEFMSGGSVYDYLHKLKG-VFKLPSLLKVAIDVSKGMNYLHQN------ 409
+L ++T F GS+ DYL KG + L VA +S+G++YLH++
Sbjct: 81 GSNLEVELWLITAFHDKGSLTDYL---KGNIITWNELCHVAETMSRGLSYLHEDVPWCRG 137
Query: 410 -----NIIHRDLKAANLLMDENEVSLLLSLCL 436
+I HRD K+ N+L+ + ++L L
Sbjct: 138 EGHKPSIAHRDFKSKNVLLKSDLTAVLADFGL 169
>pdb|3MA6|A Chain A, Crystal Structure Of Kinase Domain Of Tgcdpk1 In Presence
Of 3brb-Pp1
pdb|3MA6|B Chain B, Crystal Structure Of Kinase Domain Of Tgcdpk1 In Presence
Of 3brb-Pp1
Length = 298
Score = 59.7 bits (143), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 38/147 (25%), Positives = 72/147 (48%), Gaps = 4/147 (2%)
Query: 300 VASGSYGD--LYRGTYCSQDVAIKVLKPERINSDMQKE-FAQEVFIMRKVRHKNVVQFIG 356
+ GS+G+ L + Q+ A+KV+ ++ KE +EV +++++ H N+++
Sbjct: 40 LGKGSFGEVILCKDKITGQECAVKVISKRQVKQKTDKESLLREVQLLKQLDHPNIMKLYE 99
Query: 357 ACTKPPSLCIVTEFMSGGSVYDYLHKLKGVFKLPSLLKVAIDVSKGMNYLHQNNIIHRDL 416
+V E +GG ++D + K F ++ V G+ Y+H+N I+HRDL
Sbjct: 100 FFEDKGYFYLVGEVYTGGELFDEIISRKR-FSEVDAARIIRQVLSGITYMHKNKIVHRDL 158
Query: 417 KAANLLMDENEVSLLLSLCLFTVSILF 443
K NLL++ + + F +S F
Sbjct: 159 KPENLLLESKSKDANIRIIDFGLSTHF 185
>pdb|1P14|A Chain A, Crystal Structure Of A Catalytic-Loop Mutant Of The
Insulin Receptor Tyrosine Kinase
Length = 306
Score = 59.3 bits (142), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 44/182 (24%), Positives = 81/182 (44%), Gaps = 27/182 (14%)
Query: 285 DVWEIDPKHLKFGSKVASGSYGDLYRGTY-------CSQDVAIKVLKPERINSDMQKEFA 337
D WE+ + + ++ GS+G +Y G VA+K + E + + EF
Sbjct: 10 DEWEVSREKITLLRELGQGSFGMVYEGNARDIIKGEAETRVAVKTVN-ESASLRERIEFL 68
Query: 338 QEVFIMRKVRHKNVVQFIGACTKPPSLCIVTEFMSGGSVYDYLHKLKGVFK--------- 388
E +M+ +VV+ +G +K +V E M+ G + YL L+ +
Sbjct: 69 NEASVMKGFTCHHVVRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPT 128
Query: 389 LPSLLKVAIDVSKGMNYLHQNNIIHRDLKAANLLMDENEVSLLLSLCLFTVSILFCGKGR 448
L ++++A +++ GM YL+ +HR+L A N ++ + FTV I G R
Sbjct: 129 LQEMIQMAAEIADGMAYLNAKKFVHRNLAARNCMVAHD----------FTVKIGDFGMTR 178
Query: 449 EL 450
++
Sbjct: 179 DI 180
>pdb|3EKK|A Chain A, Insulin Receptor Kinase Complexed With An Inhibitor
pdb|3EKN|A Chain A, Insulin Receptor Kinase Complexed With An Inhibitor
Length = 307
Score = 59.3 bits (142), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 44/182 (24%), Positives = 81/182 (44%), Gaps = 27/182 (14%)
Query: 285 DVWEIDPKHLKFGSKVASGSYGDLYRGTY-------CSQDVAIKVLKPERINSDMQKEFA 337
D WE+ + + ++ GS+G +Y G VA+K + E + + EF
Sbjct: 11 DEWEVSREKITLLRELGQGSFGMVYEGNARDIIKGEAETRVAVKTVN-ESASLRERIEFL 69
Query: 338 QEVFIMRKVRHKNVVQFIGACTKPPSLCIVTEFMSGGSVYDYLHKLKGVFK--------- 388
E +M+ +VV+ +G +K +V E M+ G + YL L+ +
Sbjct: 70 NEASVMKGFTCHHVVRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPT 129
Query: 389 LPSLLKVAIDVSKGMNYLHQNNIIHRDLKAANLLMDENEVSLLLSLCLFTVSILFCGKGR 448
L ++++A +++ GM YL+ +HR+L A N ++ + FTV I G R
Sbjct: 130 LQEMIQMAAEIADGMAYLNAKKFVHRNLAARNCMVAHD----------FTVKIGDFGMTR 179
Query: 449 EL 450
++
Sbjct: 180 DI 181
>pdb|2UV2|A Chain A, Crystal Structure Of Human Ste20-Like Kinase Bound To
4-(4-(
5-Cyclopropyl-1h-Pyrazol-3-Ylamino)-Quinazolin-2-
Ylamino)- Phenyl)-Acetonitrile
Length = 287
Score = 59.3 bits (142), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 37/125 (29%), Positives = 61/125 (48%), Gaps = 8/125 (6%)
Query: 303 GSYGDLYRGTYCSQDVAIKVLKPERINSDMQKE----FAQEVFIMRKVRHKNVVQFIGAC 358
G +G +Y+ +Q+ VL ++ +E + E+ I+ H N+V+ + A
Sbjct: 21 GDFGKVYK----AQNKETSVLAAAKVIDTKSEEELEDYMVEIDILASCDHPNIVKLLDAF 76
Query: 359 TKPPSLCIVTEFMSGGSVYDYLHKLKGVFKLPSLLKVAIDVSKGMNYLHQNNIIHRDLKA 418
+L I+ EF +GG+V + +L+ + V +NYLH N IIHRDLKA
Sbjct: 77 YYENNLWILIEFCAGGAVDAVMLELERPLTESQIQVVCKQTLDALNYLHDNKIIHRDLKA 136
Query: 419 ANLLM 423
N+L
Sbjct: 137 GNILF 141
>pdb|3UC3|A Chain A, The Crystal Structure Of Snf1-Related Kinase 2.3
Length = 361
Score = 59.3 bits (142), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 45/154 (29%), Positives = 70/154 (45%), Gaps = 9/154 (5%)
Query: 290 DPKHLKFGSKVASGSYG--DLYRGTYCSQDVAIKVL-KPERINSDMQKEFAQEVFIMRKV 346
D F + SG++G L R + VA+K + + I+ ++Q+E R +
Sbjct: 18 DSDRYDFVKDIGSGNFGVARLMRDKLTKELVAVKYIERGAAIDENVQREIINH----RSL 73
Query: 347 RHKNVVQFIGACTKPPSLCIVTEFMSGGSVYDYLHKLKGVFKLPSLLKVAIDVSKGMNYL 406
RH N+V+F P L I+ E+ SGG +Y+ + G F + G++Y
Sbjct: 74 RHPNIVRFKEVILTPTHLAIIMEYASGGELYERICN-AGRFSEDEARFFFQQLLSGVSYC 132
Query: 407 HQNNIIHRDLKAANLLMDENEVSLLLSLCLFTVS 440
H I HRDLK N L+D + L +C F S
Sbjct: 133 HSMQICHRDLKLENTLLDGSPAP-RLKICDFGYS 165
>pdb|3ZUU|A Chain A, The Structure Of Ost1 (D160a, S175d) Kinase In Complex
With Gold
pdb|3ZUU|B Chain B, The Structure Of Ost1 (D160a, S175d) Kinase In Complex
With Gold
Length = 362
Score = 59.3 bits (142), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 42/144 (29%), Positives = 71/144 (49%), Gaps = 9/144 (6%)
Query: 300 VASGSYG--DLYRGTYCSQDVAIKVL-KPERINSDMQKEFAQEVFIMRKVRHKNVVQFIG 356
+ SG++G L R ++ VA+K + + E+I+ ++++E R +RH N+V+F
Sbjct: 27 IGSGNFGVARLMRDKQSNELVAVKYIERGEKIDENVKREIINH----RSLRHPNIVRFKE 82
Query: 357 ACTKPPSLCIVTEFMSGGSVYDYLHKLKGVFKLPSLLKVAIDVSKGMNYLHQNNIIHRDL 416
P L IV E+ SGG +++ + G F + G++Y H + HRDL
Sbjct: 83 VILTPTHLAIVMEYASGGELFERICN-AGRFSEDEARFFFQQLISGVSYCHAMQVCHRDL 141
Query: 417 KAANLLMDENEVSLLLSLCLFTVS 440
K N L+D + L +C F S
Sbjct: 142 KLENTLLDGSPAP-RLKICAFGYS 164
>pdb|3ZUT|A Chain A, The Structure Of Ost1 (D160a) Kinase
pdb|3ZUT|B Chain B, The Structure Of Ost1 (D160a) Kinase
Length = 362
Score = 59.3 bits (142), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 42/144 (29%), Positives = 71/144 (49%), Gaps = 9/144 (6%)
Query: 300 VASGSYG--DLYRGTYCSQDVAIKVL-KPERINSDMQKEFAQEVFIMRKVRHKNVVQFIG 356
+ SG++G L R ++ VA+K + + E+I+ ++++E R +RH N+V+F
Sbjct: 27 IGSGNFGVARLMRDKQSNELVAVKYIERGEKIDENVKREIINH----RSLRHPNIVRFKE 82
Query: 357 ACTKPPSLCIVTEFMSGGSVYDYLHKLKGVFKLPSLLKVAIDVSKGMNYLHQNNIIHRDL 416
P L IV E+ SGG +++ + G F + G++Y H + HRDL
Sbjct: 83 VILTPTHLAIVMEYASGGELFERICN-AGRFSEDEARFFFQQLISGVSYCHAMQVCHRDL 141
Query: 417 KAANLLMDENEVSLLLSLCLFTVS 440
K N L+D + L +C F S
Sbjct: 142 KLENTLLDGSPAP-RLKICAFGYS 164
>pdb|3DXN|A Chain A, Crystal Structure Of The Calcium-dependent Kinase From
Toxoplasma Gondii, 541.m00134, Kinase Domain
Length = 287
Score = 59.3 bits (142), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 43/156 (27%), Positives = 76/156 (48%), Gaps = 6/156 (3%)
Query: 299 KVASGSYGD--LYRGTYCSQDVAIKVLKPERINSDMQK-EFAQEVFIMRKVRHKNVVQFI 355
K+ SG+YG+ L + + AIK++K + + EV +++++ H N+++
Sbjct: 28 KLGSGAYGEVLLCKDKLTGAERAIKIIKKSSVTTTSNSGALLDEVAVLKQLDHPNIMKLY 87
Query: 356 GACTKPPSLCIVTEFMSGGSVYDYLHKLKGVFKLPSLLKVAIDVSKGMNYLHQNNIIHRD 415
+ +V E GG ++D + L+ F + V G YLH++NI+HRD
Sbjct: 88 EFFEDKRNYYLVMEVYRGGELFDEII-LRQKFSEVDAAVIMKQVLSGTTYLHKHNIVHRD 146
Query: 416 LKAANLLMDENEVSLLLSLCLFTVSILF--CGKGRE 449
LK NLL++ L+ + F +S F GK +E
Sbjct: 147 LKPENLLLESKSRDALIKIVDFGLSAHFEVGGKMKE 182
>pdb|3I7C|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor Na-Pp2
pdb|3NYV|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Non-Specific Inhibitor
Whi-P180
Length = 484
Score = 58.9 bits (141), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 38/147 (25%), Positives = 70/147 (47%), Gaps = 4/147 (2%)
Query: 300 VASGSYGD--LYRGTYCSQDVAIKVLKPERINSDMQKE-FAQEVFIMRKVRHKNVVQFIG 356
+ GS+G+ L + Q+ A+KV+ ++ KE +EV +++++ H N+ +
Sbjct: 34 LGKGSFGEVILCKDKITGQECAVKVISKRQVKQKTDKESLLREVQLLKQLDHPNIXKLYE 93
Query: 357 ACTKPPSLCIVTEFMSGGSVYDYLHKLKGVFKLPSLLKVAIDVSKGMNYLHQNNIIHRDL 416
+V E +GG ++D + K F ++ V G+ Y H+N I+HRDL
Sbjct: 94 FFEDKGYFYLVGEVYTGGELFDEIISRK-RFSEVDAARIIRQVLSGITYXHKNKIVHRDL 152
Query: 417 KAANLLMDENEVSLLLSLCLFTVSILF 443
K NLL++ + + F +S F
Sbjct: 153 KPENLLLESKSKDANIRIIDFGLSTHF 179
>pdb|3TUB|A Chain A, Crystal Structure Of Syk Kinase Domain With 1-(5-(6,7-
Dimethoxyquinolin-4-Yloxy)pyridin-2-Yl)-3-((1r,2s)-2-
Phenylcyclopropyl)urea
Length = 293
Score = 58.5 bits (140), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 50/169 (29%), Positives = 85/169 (50%), Gaps = 22/169 (13%)
Query: 267 DTGMKSHPYHLKIPNDGTDVWEIDPKHLKFGSKV--------ASGSYGDLYRGTY----C 314
DT + PY D EI PK + K+ SG++G + +G Y
Sbjct: 2 DTEVYESPY--------ADPEEIRPKEVYLDRKLLTLEDKELGSGNFGTVKKGYYQMKKV 53
Query: 315 SQDVAIKVLKPERINSDMQKEFAQEVFIMRKVRHKNVVQFIGACTKPPSLCIVTEFMSGG 374
+ VA+K+LK E + ++ E E +M+++ + +V+ IG C + S +V E G
Sbjct: 54 VKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRMIGIC-EAESWMLVMEMAELG 112
Query: 375 SVYDYLHKLKGVFKLPSLLKVAIDVSKGMNYLHQNNIIHRDLKAANLLM 423
+ YL + + V K +++++ VS GM YL ++N +HRDL A N+L+
Sbjct: 113 PLNKYLQQNRHV-KDKNIIELVHQVSMGMKYLEESNFVHRDLAARNVLL 160
>pdb|3VF8|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Syk Catalytic
Domain With Pyrazolylbenzimidazole Inhibitor 416
pdb|3VF9|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Syk Catalytic
Domain With Thienopyrazolylindole Inhibitor 027
pdb|3TUC|A Chain A, Crystal Structure Of Syk Kinase Domain With
1-Benzyl-N-(5-(6,7-
Dimethoxyquinolin-4-Yloxy)pyridin-2-Yl)-2-Oxo-1,
2-Dihydropyridine-3- Carboxamide
pdb|3TUD|A Chain A, Crystal Structure Of Syk Kinase Domain With
N-(4-Methyl-3-(8-Methyl-7-
Oxo-2-(Phenylamino)-7,8-Dihydropyrido[2,
3-D]pyrimidin-6-Yl)phenyl)-3- (Trifluoromethyl)benzamide
Length = 299
Score = 58.5 bits (140), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 50/169 (29%), Positives = 85/169 (50%), Gaps = 22/169 (13%)
Query: 267 DTGMKSHPYHLKIPNDGTDVWEIDPKHLKFGSKV--------ASGSYGDLYRGTY----C 314
DT + PY D EI PK + K+ SG++G + +G Y
Sbjct: 2 DTEVYESPY--------ADPEEIRPKEVYLDRKLLTLEDKELGSGNFGTVKKGYYQMKKV 53
Query: 315 SQDVAIKVLKPERINSDMQKEFAQEVFIMRKVRHKNVVQFIGACTKPPSLCIVTEFMSGG 374
+ VA+K+LK E + ++ E E +M+++ + +V+ IG C + S +V E G
Sbjct: 54 VKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRMIGIC-EAESWMLVMEMAELG 112
Query: 375 SVYDYLHKLKGVFKLPSLLKVAIDVSKGMNYLHQNNIIHRDLKAANLLM 423
+ YL + + V K +++++ VS GM YL ++N +HRDL A N+L+
Sbjct: 113 PLNKYLQQNRHV-KDKNIIELVHQVSMGMKYLEESNFVHRDLAARNVLL 160
>pdb|4F0I|A Chain A, Crystal Structure Of Apo Trka
pdb|4F0I|B Chain B, Crystal Structure Of Apo Trka
Length = 300
Score = 58.5 bits (140), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 37/125 (29%), Positives = 61/125 (48%), Gaps = 16/125 (12%)
Query: 318 VAIKVLKPERINSDMQKEFAQEVFIMRKVRHKNVVQFIGACTKPPSLCIVTEFMSGGSVY 377
VA+K LK + +++F +E ++ ++H+++V+F G CT+ L +V E+M G +
Sbjct: 45 VAVKALK--EASESARQDFQREAELLTMLQHQHIVRFFGVCTEGRPLLMVFEYMRHGDLN 102
Query: 378 DYLHK--------------LKGVFKLPSLLKVAIDVSKGMNYLHQNNIIHRDLKAANLLM 423
+L G L LL VA V+ GM YL + +HRDL N L+
Sbjct: 103 RFLRSHGPDAKLLAGGEDVAPGPLGLGQLLAVASQVAAGMVYLAGLHFVHRDLATRNCLV 162
Query: 424 DENEV 428
+ V
Sbjct: 163 GQGLV 167
>pdb|4FVP|A Chain A, Crystal Structure Of The Jak2 Pseudokinase Domain (Apo
Form)
pdb|4FVQ|A Chain A, Crystal Structure Of The Jak2 Pseudokinase Domain
(Mg-Atp-Bound Form)
Length = 289
Score = 58.5 bits (140), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 38/131 (29%), Positives = 67/131 (51%), Gaps = 7/131 (5%)
Query: 297 GSKVASGSYGDLYRGTYCSQDVAIKVLKPERINSDMQKEFAQEVFIMRKVRHKNVVQFIG 356
G + G YG L+ +V +KVL ++ + + + F + +M K+ HK++V G
Sbjct: 27 GVRREVGDYGQLHE-----TEVLLKVL--DKAHRNYSESFFEAASMMSKLSHKHLVLNYG 79
Query: 357 ACTKPPSLCIVTEFMSGGSVYDYLHKLKGVFKLPSLLKVAIDVSKGMNYLHQNNIIHRDL 416
C +V EF+ GS+ YL K K + L+VA ++ M++L +N +IH ++
Sbjct: 80 VCVCGDENILVQEFVKFGSLDTYLKKNKNCINILWKLEVAKQLAAAMHFLEENTLIHGNV 139
Query: 417 KAANLLMDENE 427
A N+L+ E
Sbjct: 140 CAKNILLIREE 150
>pdb|4GT5|A Chain A, Crystal Structure Of The Inactive Trka Kinase Domain
Length = 306
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 37/125 (29%), Positives = 61/125 (48%), Gaps = 16/125 (12%)
Query: 318 VAIKVLKPERINSDMQKEFAQEVFIMRKVRHKNVVQFIGACTKPPSLCIVTEFMSGGSVY 377
VA+K LK + +++F +E ++ ++H+++V+F G CT+ L +V E+M G +
Sbjct: 51 VAVKALK--EASESARQDFQREAELLTMLQHQHIVRFFGVCTEGRPLLMVFEYMRHGDLN 108
Query: 378 DYLHK--------------LKGVFKLPSLLKVAIDVSKGMNYLHQNNIIHRDLKAANLLM 423
+L G L LL VA V+ GM YL + +HRDL N L+
Sbjct: 109 RFLRSHGPDAKLLAGGEDVAPGPLGLGQLLAVASQVAAGMVYLAGLHFVHRDLATRNCLV 168
Query: 424 DENEV 428
+ V
Sbjct: 169 GQGLV 173
>pdb|2YDJ|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
pdb|2YDJ|B Chain B, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 276
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 43/152 (28%), Positives = 76/152 (50%), Gaps = 7/152 (4%)
Query: 300 VASGSYGD--LYRGTYCSQDVAIKVLKPERINSDMQKEFAQEVFIMRKVRHKNVVQFIGA 357
+ G+YG+ L + VA+K++ +R D + +E+ I + + H+NVV+F G
Sbjct: 15 LGEGAYGEVQLAVNRVTEEAVAVKIVDMKRA-VDCPENIKKEIXINKMLNHENVVKFYGH 73
Query: 358 CTKPPSLCIVTEFMSGGSVYDYLHKLKGVFKLPSLLKVAIDVSKGMNYLHQNNIIHRDLK 417
+ + E+ SGG ++D + G+ + P + + G+ YLH I HRD+K
Sbjct: 74 RREGNIQYLFLEYCSGGELFDRIEPDIGMPE-PDAQRFFHQLMAGVVYLHGIGITHRDIK 132
Query: 418 AANLLMDENEVSLLLSLCLFTVSILFCGKGRE 449
NLL+DE + L + F ++ +F RE
Sbjct: 133 PENLLLDERDN---LKISDFGLATVFRYNNRE 161
>pdb|4FSZ|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 43/152 (28%), Positives = 76/152 (50%), Gaps = 7/152 (4%)
Query: 300 VASGSYGD--LYRGTYCSQDVAIKVLKPERINSDMQKEFAQEVFIMRKVRHKNVVQFIGA 357
+ G+YG+ L + VA+K++ +R D + +E+ I + + H+NVV+F G
Sbjct: 14 LGEGAYGEVQLAVNRVTEEAVAVKIVDMKRA-VDCPENIKKEIXINKMLNHENVVKFYGH 72
Query: 358 CTKPPSLCIVTEFMSGGSVYDYLHKLKGVFKLPSLLKVAIDVSKGMNYLHQNNIIHRDLK 417
+ + E+ SGG ++D + G+ + P + + G+ YLH I HRD+K
Sbjct: 73 RREGNIQYLFLEYCSGGELFDRIEPDIGMPE-PDAQRFFHQLMAGVVYLHGIGITHRDIK 131
Query: 418 AANLLMDENEVSLLLSLCLFTVSILFCGKGRE 449
NLL+DE + L + F ++ +F RE
Sbjct: 132 PENLLLDERDN---LKISDFGLATVFRYNNRE 160
>pdb|3UJG|A Chain A, Crystal Structure Of Snrk2.6 In Complex With Hab1
Length = 361
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 42/144 (29%), Positives = 71/144 (49%), Gaps = 9/144 (6%)
Query: 300 VASGSYG--DLYRGTYCSQDVAIKVL-KPERINSDMQKEFAQEVFIMRKVRHKNVVQFIG 356
+ SG++G L R ++ VA+K + + E+I+ ++++E R +RH N+V+F
Sbjct: 26 IGSGNFGVARLMRDKQSNELVAVKYIERGEKIDENVKREIINH----RSLRHPNIVRFKE 81
Query: 357 ACTKPPSLCIVTEFMSGGSVYDYLHKLKGVFKLPSLLKVAIDVSKGMNYLHQNNIIHRDL 416
P L IV E+ SGG +++ + G F + G++Y H + HRDL
Sbjct: 82 VILTPTHLAIVMEYASGGELFERICN-AGRFSEDEARFFFQQLISGVSYCHAMQVCHRDL 140
Query: 417 KAANLLMDENEVSLLLSLCLFTVS 440
K N L+D + L +C F S
Sbjct: 141 KLENTLLDGSPAP-RLKICDFGYS 163
>pdb|3EMG|A Chain A, Discovery And Sar Of Novel 4-Thiazolyl-2-
Phenylaminopyrimidines As Potent Inhibitors Of Spleen
Tyrosine Kinase (Syk)
Length = 291
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 45/148 (30%), Positives = 79/148 (53%), Gaps = 14/148 (9%)
Query: 288 EIDPKHLKFGSKV--------ASGSYGDLYRGTY----CSQDVAIKVLKPERINSDMQKE 335
EI PK + K+ SG++G + +G Y + VA+K+LK E + ++ E
Sbjct: 13 EIRPKEVYLDRKLLTLEDKELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDE 72
Query: 336 FAQEVFIMRKVRHKNVVQFIGACTKPPSLCIVTEFMSGGSVYDYLHKLKGVFKLPSLLKV 395
E +M+++ + +V+ IG C + S +V E G + YL + + V K +++++
Sbjct: 73 LLAEANVMQQLDNPYIVRMIGIC-EAESWMLVMEMAELGPLNKYLQQNRHV-KDKNIIEL 130
Query: 396 AIDVSKGMNYLHQNNIIHRDLKAANLLM 423
VS GM YL ++N +HRDL A N+L+
Sbjct: 131 VHQVSMGMKYLEESNFVHRDLAARNVLL 158
>pdb|3RZF|A Chain A, Crystal Structure Of Inhibitor Of Kappab Kinase Beta
(I4122)
Length = 677
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 42/158 (26%), Positives = 74/158 (46%), Gaps = 24/158 (15%)
Query: 279 IPNDGTDVWEIDPKHLKFGSKVASGSYGDLYRGTY--CSQDVAIKVLKPERINSDMQKEF 336
+P WE+ ++ +G +G + R + + VAIK + E ++ ++ +
Sbjct: 9 LPTQTCGPWEMK-------ERLGTGGFGYVLRWIHQDTGEQVAIKQCRQE-LSPKNRERW 60
Query: 337 AQEVFIMRKVRHKNVVQFIGACTKPPSL---------CIVTEFMSGGSVYDYLHKLKGVF 387
E+ IM+K+ H NVV A P L + E+ GG + YL++ +
Sbjct: 61 CLEIQIMKKLNHPNVV---SAREVPDGLQKLAPNDLPLLAMEYCEGGDLRKYLNQFENCC 117
Query: 388 KLPS--LLKVAIDVSKGMNYLHQNNIIHRDLKAANLLM 423
L + + D+S + YLH+N IIHRDLK N+++
Sbjct: 118 GLKEGPIRTLLSDISSALRYLHENRIIHRDLKPENIVL 155
>pdb|3QA8|A Chain A, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|B Chain B, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|C Chain C, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|D Chain D, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|E Chain E, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|F Chain F, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|G Chain G, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|H Chain H, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
Length = 676
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 42/158 (26%), Positives = 74/158 (46%), Gaps = 24/158 (15%)
Query: 279 IPNDGTDVWEIDPKHLKFGSKVASGSYGDLYRGTY--CSQDVAIKVLKPERINSDMQKEF 336
+P WE+ ++ +G +G + R + + VAIK + E ++ ++ +
Sbjct: 8 LPTQTCGPWEMK-------ERLGTGGFGYVLRWIHQDTGEQVAIKQCRQE-LSPKNRERW 59
Query: 337 AQEVFIMRKVRHKNVVQFIGACTKPPSL---------CIVTEFMSGGSVYDYLHKLKGVF 387
E+ IM+K+ H NVV A P L + E+ GG + YL++ +
Sbjct: 60 CLEIQIMKKLNHPNVV---SAREVPDGLQKLAPNDLPLLAMEYCEGGDLRKYLNQFENCC 116
Query: 388 KLPS--LLKVAIDVSKGMNYLHQNNIIHRDLKAANLLM 423
L + + D+S + YLH+N IIHRDLK N+++
Sbjct: 117 GLKEGPIRTLLSDISSALRYLHENRIIHRDLKPENIVL 154
>pdb|1YHV|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Two Point
Mutations (K299r, T423e)
pdb|2HY8|1 Chain 1, Pak1 Complex With St2001
Length = 297
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 37/139 (26%), Positives = 73/139 (52%), Gaps = 11/139 (7%)
Query: 290 DPK--HLKFGSKVASGSYGDLYRG--TYCSQDVAIKVLKPERINSDMQKEFA-QEVFIMR 344
DPK + +F K+ G+ G +Y Q+VAI+ + + +KE E+ +MR
Sbjct: 17 DPKKKYTRF-EKIGQGASGTVYTAMDVATGQEVAIRQMN---LQQQPKKELIINEILVMR 72
Query: 345 KVRHKNVVQFIGACTKPPSLCIVTEFMSGGSVYDYLHKLKGVFKLPSLLKVAIDVSKGMN 404
+ ++ N+V ++ + L +V E+++GGS+ D + + + V + + +
Sbjct: 73 ENKNPNIVNYLDSYLVGDELWVVMEYLAGGSLTDVVTET--CMDEGQIAAVCRECLQALE 130
Query: 405 YLHQNNIIHRDLKAANLLM 423
+LH N +IHRD+K+ N+L+
Sbjct: 131 FLHSNQVIHRDIKSDNILL 149
>pdb|4FT3|A Chain A, Crystal Structure Of The Chk1
pdb|4GH2|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 43/152 (28%), Positives = 76/152 (50%), Gaps = 7/152 (4%)
Query: 300 VASGSYGD--LYRGTYCSQDVAIKVLKPERINSDMQKEFAQEVFIMRKVRHKNVVQFIGA 357
+ G+YG+ L + VA+K++ +R D + +E+ I + + H+NVV+F G
Sbjct: 14 LGEGAYGEVQLAVNRVTEEAVAVKIVDMKRA-VDCPENIKKEICINKMLNHENVVKFYGH 72
Query: 358 CTKPPSLCIVTEFMSGGSVYDYLHKLKGVFKLPSLLKVAIDVSKGMNYLHQNNIIHRDLK 417
+ + E+ SGG ++D + G+ + P + + G+ YLH I HRD+K
Sbjct: 73 RREGNIQYLFLEYCSGGELFDRIEPDIGMPE-PDAQRFFHQLMAGVVYLHGIGITHRDIK 131
Query: 418 AANLLMDENEVSLLLSLCLFTVSILFCGKGRE 449
NLL+DE + L + F ++ +F RE
Sbjct: 132 PENLLLDERDN---LKISDFGLATVFRYNNRE 160
>pdb|3Q52|A Chain A, Structure Of Phosphorylated Pak1 Kinase Domain
pdb|3Q53|A Chain A, Structure Of Phosphorylated Pak1 Kinase Domain In Complex
With Atp
Length = 306
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 37/139 (26%), Positives = 73/139 (52%), Gaps = 11/139 (7%)
Query: 290 DPK--HLKFGSKVASGSYGDLYRG--TYCSQDVAIKVLKPERINSDMQKEFA-QEVFIMR 344
DPK + +F K+ G+ G +Y Q+VAI+ + + +KE E+ +MR
Sbjct: 18 DPKKKYTRF-EKIGQGASGTVYTAMDVATGQEVAIRQMN---LQQQPKKELIINEILVMR 73
Query: 345 KVRHKNVVQFIGACTKPPSLCIVTEFMSGGSVYDYLHKLKGVFKLPSLLKVAIDVSKGMN 404
+ ++ N+V ++ + L +V E+++GGS+ D + + + V + + +
Sbjct: 74 ENKNPNIVNYLDSYLVGDELWVVMEYLAGGSLTDVVTET--CMDEGQIAAVCRECLQALE 131
Query: 405 YLHQNNIIHRDLKAANLLM 423
+LH N +IHRD+K+ N+L+
Sbjct: 132 FLHSNQVIHRDIKSDNILL 150
>pdb|1F3M|C Chain C, Crystal Structure Of Human SerineTHREONINE KINASE PAK1
pdb|1F3M|D Chain D, Crystal Structure Of Human SerineTHREONINE KINASE PAK1
pdb|1YHW|A Chain A, Crystal Structure Of Pak1 Kinase Domain With One Point
Mutations (K299r)
Length = 297
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 37/139 (26%), Positives = 73/139 (52%), Gaps = 11/139 (7%)
Query: 290 DPK--HLKFGSKVASGSYGDLYRG--TYCSQDVAIKVLKPERINSDMQKEFA-QEVFIMR 344
DPK + +F K+ G+ G +Y Q+VAI+ + + +KE E+ +MR
Sbjct: 17 DPKKKYTRF-EKIGQGASGTVYTAMDVATGQEVAIRQMN---LQQQPKKELIINEILVMR 72
Query: 345 KVRHKNVVQFIGACTKPPSLCIVTEFMSGGSVYDYLHKLKGVFKLPSLLKVAIDVSKGMN 404
+ ++ N+V ++ + L +V E+++GGS+ D + + + V + + +
Sbjct: 73 ENKNPNIVNYLDSYLVGDELWVVMEYLAGGSLTDVVTET--CMDEGQIAAVCRECLQALE 130
Query: 405 YLHQNNIIHRDLKAANLLM 423
+LH N +IHRD+K+ N+L+
Sbjct: 131 FLHSNQVIHRDIKSDNILL 149
>pdb|2HOG|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 20
pdb|2HXL|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 1
pdb|2HXQ|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 2
pdb|2HY0|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 22
pdb|3F9N|A Chain A, Crystal Structure Of Chk1 Kinase In Complex With Inhibitor
38
Length = 322
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 43/152 (28%), Positives = 76/152 (50%), Gaps = 7/152 (4%)
Query: 300 VASGSYGD--LYRGTYCSQDVAIKVLKPERINSDMQKEFAQEVFIMRKVRHKNVVQFIGA 357
+ G+YG+ L + VA+K++ +R D + +E+ I + + H+NVV+F G
Sbjct: 14 LGEGAYGEVQLAVNRVTEEAVAVKIVDMKRA-VDCPENIKKEICINKMLNHENVVKFYGH 72
Query: 358 CTKPPSLCIVTEFMSGGSVYDYLHKLKGVFKLPSLLKVAIDVSKGMNYLHQNNIIHRDLK 417
+ + E+ SGG ++D + G+ + P + + G+ YLH I HRD+K
Sbjct: 73 RREGNIQYLFLEYCSGGELFDRIEPDIGMPE-PDAQRFFHQLMAGVVYLHGIGITHRDIK 131
Query: 418 AANLLMDENEVSLLLSLCLFTVSILFCGKGRE 449
NLL+DE + L + F ++ +F RE
Sbjct: 132 PENLLLDERDN---LKISDFGLATVFRYNNRE 160
>pdb|2R0U|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 54
pdb|2QHM|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 2a
pdb|2QHN|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 1a
pdb|3TKH|A Chain A, Crystal Structure Of Chk1 In Complex With Inhibitor S01
pdb|3TKI|A Chain A, Crystal Structure Of Chk1 In Complex With Inhibitor S25
Length = 323
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 43/152 (28%), Positives = 76/152 (50%), Gaps = 7/152 (4%)
Query: 300 VASGSYGD--LYRGTYCSQDVAIKVLKPERINSDMQKEFAQEVFIMRKVRHKNVVQFIGA 357
+ G+YG+ L + VA+K++ +R D + +E+ I + + H+NVV+F G
Sbjct: 15 LGEGAYGEVQLAVNRVTEEAVAVKIVDMKRA-VDCPENIKKEICINKMLNHENVVKFYGH 73
Query: 358 CTKPPSLCIVTEFMSGGSVYDYLHKLKGVFKLPSLLKVAIDVSKGMNYLHQNNIIHRDLK 417
+ + E+ SGG ++D + G+ + P + + G+ YLH I HRD+K
Sbjct: 74 RREGNIQYLFLEYCSGGELFDRIEPDIGMPE-PDAQRFFHQLMAGVVYLHGIGITHRDIK 132
Query: 418 AANLLMDENEVSLLLSLCLFTVSILFCGKGRE 449
NLL+DE + L + F ++ +F RE
Sbjct: 133 PENLLLDERDN---LKISDFGLATVFRYNNRE 161
>pdb|1XBA|A Chain A, Crystal Structure Of Apo Syk Tyrosine Kinase Domain
pdb|1XBB|A Chain A, Crystal Structure Of The Syk Tyrosine Kinase Domain With
Gleevec
pdb|1XBC|A Chain A, Crystal Structure Of The Syk Tyrosine Kinase Domain With
Staurosporin
pdb|3FQE|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
Ym193306
pdb|3FQH|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
A 2-Substituted 7-Azaindole
pdb|3FQH|B Chain B, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
A 2-Substituted 7-Azaindole
pdb|3FQS|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
R406
pdb|4FL1|A Chain A, Structural And Biophysical Characterization Of The Syk
Activation Switch
pdb|4FYN|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
3-(8-{4-
[ethyl-(2-hydroxy-ethyl)-amino]-phenylamino}-imidazo[1,
2-a]pyrazin-5- Yl)-phenol
pdb|4FYO|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
N-{(s)-1-
[7-(3,4-dimethoxy-phenylamino)-thiazolo[5,
4-d]pyrimidin-5-yl]- Pyrrolidin-3-yl}-terephthalamic
Acid
pdb|4FZ6|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
[6-((s)-2-
Methyl-pyrrolidin-1-yl)-pyridin-2-yl]-(6-phenyl-
imidazo[1,2- B]pyridazin-8-yl)-amine
Length = 291
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 45/148 (30%), Positives = 79/148 (53%), Gaps = 14/148 (9%)
Query: 288 EIDPKHLKFGSKV--------ASGSYGDLYRGTY----CSQDVAIKVLKPERINSDMQKE 335
EI PK + K+ SG++G + +G Y + VA+K+LK E + ++ E
Sbjct: 5 EIRPKEVYLDRKLLTLEDKELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDE 64
Query: 336 FAQEVFIMRKVRHKNVVQFIGACTKPPSLCIVTEFMSGGSVYDYLHKLKGVFKLPSLLKV 395
E +M+++ + +V+ IG C + S +V E G + YL + + V K +++++
Sbjct: 65 LLAEANVMQQLDNPYIVRMIGIC-EAESWMLVMEMAELGPLNKYLQQNRHV-KDKNIIEL 122
Query: 396 AIDVSKGMNYLHQNNIIHRDLKAANLLM 423
VS GM YL ++N +HRDL A N+L+
Sbjct: 123 VHQVSMGMKYLEESNFVHRDLAARNVLL 150
>pdb|3FXZ|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Ruthenium
Complex Lambda-Fl172
pdb|3FY0|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Ruthenium
Complex Dw1
pdb|4DAW|A Chain A, Crystal Structure Of Pak1 Kinase Domain With The Ruthenium
Phthalimide Complex
Length = 297
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 37/139 (26%), Positives = 73/139 (52%), Gaps = 11/139 (7%)
Query: 290 DPK--HLKFGSKVASGSYGDLYRG--TYCSQDVAIKVLKPERINSDMQKEFA-QEVFIMR 344
DPK + +F K+ G+ G +Y Q+VAI+ + + +KE E+ +MR
Sbjct: 17 DPKKKYTRF-EKIGQGASGTVYTAMDVATGQEVAIRQMN---LQQQPKKELIINEILVMR 72
Query: 345 KVRHKNVVQFIGACTKPPSLCIVTEFMSGGSVYDYLHKLKGVFKLPSLLKVAIDVSKGMN 404
+ ++ N+V ++ + L +V E+++GGS+ D + + + V + + +
Sbjct: 73 ENKNPNIVNYLDSYLVGDELWVVMEYLAGGSLTDVVTET--CMDEGQIAAVCRECLQALE 130
Query: 405 YLHQNNIIHRDLKAANLLM 423
+LH N +IHRD+K+ N+L+
Sbjct: 131 FLHSNQVIHRDIKSDNILL 149
>pdb|3MY0|A Chain A, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|B Chain B, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|C Chain C, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|D Chain D, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|E Chain E, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|F Chain F, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|G Chain G, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|H Chain H, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|I Chain I, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|J Chain J, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|K Chain K, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|L Chain L, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|M Chain M, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|N Chain N, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|O Chain O, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|P Chain P, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|Q Chain Q, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|R Chain R, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|S Chain S, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|T Chain T, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|U Chain U, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|V Chain V, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|W Chain W, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|X Chain X, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
Length = 305
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 38/140 (27%), Positives = 70/140 (50%), Gaps = 19/140 (13%)
Query: 300 VASGSYGDLYRGTYCSQDVAIKVLKPERINSDMQKEFAQ-EVFIMRKVRHKNVVQFIG-- 356
V G YG+++RG + + VA+K+ + D Q F + E++ +RH N++ FI
Sbjct: 16 VGKGRYGEVWRGLWHGESVAVKIFS----SRDEQSWFRETEIYNTVLLRHDNILGFIASD 71
Query: 357 --ACTKPPSLCIVTEFMSGGSVYDYLHKLKGVFKLPSLLKVAIDVSKGMNYLH------- 407
+ L ++T + GS+YD+L + + L++A+ + G+ +LH
Sbjct: 72 MTSRNSSTQLWLITHYHEHGSLYDFLQ--RQTLEPHLALRLAVSAACGLAHLHVEIFGTQ 129
Query: 408 -QNNIIHRDLKAANLLMDEN 426
+ I HRD K+ N+L+ N
Sbjct: 130 GKPAIAHRDFKSRNVLVKSN 149
>pdb|4ASZ|A Chain A, Crystal Structure Of Apo Trkb Kinase Domain
pdb|4AT3|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Cpd5n
pdb|4AT4|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Ex429
pdb|4AT5|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Gw2580
Length = 299
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 46/176 (26%), Positives = 83/176 (47%), Gaps = 24/176 (13%)
Query: 284 TDVWEIDPKHLKFGSKVASGSYGDLYRG---TYCSQD----VAIKVLKPERINSDMQKEF 336
T V I ++ ++ G++G ++ C + VA+K LK N+ +K+F
Sbjct: 5 TFVQHIKRHNIVLKRELGEGAFGKVFLAECYNLCPEQDKILVAVKTLKDASDNA--RKDF 62
Query: 337 AQEVFIMRKVRHKNVVQFIGACTKPPSLCIVTEFMSGGSVYDYL--HKLKGVFKLPS--- 391
+E ++ ++H+++V+F G C + L +V E+M G + +L H V
Sbjct: 63 HREAELLTNLQHEHIVKFYGVCVEGDPLIMVFEYMKHGDLNKFLRAHGPDAVLMAEGNPP 122
Query: 392 -------LLKVAIDVSKGMNYLHQNNIIHRDLKAANLLMDENEVSLLLSLCLFTVS 440
+L +A ++ GM YL + +HRDL N L+ EN LL+ + F +S
Sbjct: 123 TELTQSQMLHIAQQIAAGMVYLASQHFVHRDLATRNCLVGEN---LLVKIGDFGMS 175
>pdb|3UC4|A Chain A, The Crystal Structure Of Snf1-Related Kinase 2.6
pdb|3UC4|B Chain B, The Crystal Structure Of Snf1-Related Kinase 2.6
Length = 362
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 42/144 (29%), Positives = 71/144 (49%), Gaps = 9/144 (6%)
Query: 300 VASGSYG--DLYRGTYCSQDVAIKVL-KPERINSDMQKEFAQEVFIMRKVRHKNVVQFIG 356
+ SG++G L R ++ VA+K + + E+I +++++E R +RH N+V+F
Sbjct: 27 IGSGNFGVARLMRDKQSNELVAVKYIERGEKIAANVKREIINH----RSLRHPNIVRFKE 82
Query: 357 ACTKPPSLCIVTEFMSGGSVYDYLHKLKGVFKLPSLLKVAIDVSKGMNYLHQNNIIHRDL 416
P L IV E+ SGG +++ + G F + G++Y H + HRDL
Sbjct: 83 VILTPTHLAIVMEYASGGELFERICN-AGRFSEDEARFFFQQLISGVSYCHAMQVCHRDL 141
Query: 417 KAANLLMDENEVSLLLSLCLFTVS 440
K N L+D + L +C F S
Sbjct: 142 KLENTLLDGSPAP-RLKICDFGYS 164
>pdb|4FSY|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 43/152 (28%), Positives = 76/152 (50%), Gaps = 7/152 (4%)
Query: 300 VASGSYGD--LYRGTYCSQDVAIKVLKPERINSDMQKEFAQEVFIMRKVRHKNVVQFIGA 357
+ G+YG+ L + VA+K++ +R D + +E+ I + + H+NVV+F G
Sbjct: 14 LGEGAYGEVQLAVNRVTEEAVAVKIVDMKRA-VDCPENIKKEIXINKMLNHENVVKFYGH 72
Query: 358 CTKPPSLCIVTEFMSGGSVYDYLHKLKGVFKLPSLLKVAIDVSKGMNYLHQNNIIHRDLK 417
+ + E+ SGG ++D + G+ + P + + G+ YLH I HRD+K
Sbjct: 73 RREGNIQYLFLEYCSGGELFDRIEPDIGMPE-PDAQRFFHQLMAGVVYLHGIGITHRDIK 131
Query: 418 AANLLMDENEVSLLLSLCLFTVSILFCGKGRE 449
NLL+DE + L + F ++ +F RE
Sbjct: 132 PENLLLDERDN---LKISDFGLATVFRYNNRE 160
>pdb|3R21|A Chain A, Design, Synthesis, And Biological Evaluation Of
Pyrazolopyridine- Sulfonamides As Potent
Multiple-Mitotic Kinase (Mmk) Inhibitors (Part I)
pdb|3R22|A Chain A, Design, Synthesis, And Biological Evaluation Of
Pyrazolopyridine- Sulfonamides As Potent
Multiple-Mitotic Kinase (Mmk) Inhibitors (Part I)
pdb|4DHF|A Chain A, Structure Of Aurora A Mutant Bound To Biogenidec Cpd 15
pdb|4DHF|B Chain B, Structure Of Aurora A Mutant Bound To Biogenidec Cpd 15
Length = 271
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 37/144 (25%), Positives = 70/144 (48%), Gaps = 6/144 (4%)
Query: 283 GTDVWEIDPKHLKFGSKVASGSYGDLY--RGTYCSQDVAIKVL-KPERINSDMQKEFAQE 339
G+ W ++ + G + G +G++Y R +A+KVL K + + ++ + +E
Sbjct: 4 GSRQWALE--DFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRRE 61
Query: 340 VFIMRKVRHKNVVQFIGACTKPPSLCIVTEFMSGGSVYDYLHKLKGVFKLPSLLKVAIDV 399
V I +RH N+++ G + ++ E+ G+VY L KL F ++
Sbjct: 62 VEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSK-FDEQRTATYITEL 120
Query: 400 SKGMNYLHQNNIIHRDLKAANLLM 423
+ ++Y H +IHRD+K NLL+
Sbjct: 121 ANALSYCHSKRVIHRDIKPENLLL 144
>pdb|4FST|A Chain A, Crystal Structure Of The Chk1
Length = 269
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 43/152 (28%), Positives = 76/152 (50%), Gaps = 7/152 (4%)
Query: 300 VASGSYGD--LYRGTYCSQDVAIKVLKPERINSDMQKEFAQEVFIMRKVRHKNVVQFIGA 357
+ G+YG+ L + VA+K++ +R D + +E+ I + + H+NVV+F G
Sbjct: 14 LGEGAYGEVQLAVNRVTEEAVAVKIVDMKRA-VDCPENIKKEICINKMLNHENVVKFYGH 72
Query: 358 CTKPPSLCIVTEFMSGGSVYDYLHKLKGVFKLPSLLKVAIDVSKGMNYLHQNNIIHRDLK 417
+ + E+ SGG ++D + G+ + P + + G+ YLH I HRD+K
Sbjct: 73 RREGNIQYLFLEYCSGGELFDRIEPDIGMPE-PDAQRFFHQLMAGVVYLHGIGITHRDIK 131
Query: 418 AANLLMDENEVSLLLSLCLFTVSILFCGKGRE 449
NLL+DE + L + F ++ +F RE
Sbjct: 132 PENLLLDERDN---LKISDFGLATVFRYNNRE 160
>pdb|1FOT|A Chain A, Structure Of The Unliganded Camp-Dependent Protein Kinase
Catalytic Subunit From Saccharomyces Cerevisiae
Length = 318
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 38/130 (29%), Positives = 66/130 (50%), Gaps = 4/130 (3%)
Query: 300 VASGSYG--DLYRGTYCSQDVAIKVLKPERINSDMQKEFAQ-EVFIMRKVRHKNVVQFIG 356
+ +GS+G L R + + A+KVLK E + Q E E ++ V H +++ G
Sbjct: 14 LGTGSFGRVHLIRSRHNGRYYAMKVLKKEIVVRLKQVEHTNDERLMLSIVTHPFIIRMWG 73
Query: 357 ACTKPPSLCIVTEFMSGGSVYDYLHKLKGVFKLPSLLKVAIDVSKGMNYLHQNNIIHRDL 416
+ ++ +++ GG ++ L K + F P A +V + YLH +II+RDL
Sbjct: 74 TFQDAQQIFMIMDYIEGGELFSLLRKSQR-FPNPVAKFYAAEVCLALEYLHSKDIIYRDL 132
Query: 417 KAANLLMDEN 426
K N+L+D+N
Sbjct: 133 KPENILLDKN 142
>pdb|4FSW|A Chain A, Crystal Structure Of The Chk1
pdb|4FTA|A Chain A, Crystal Structure Of The Chk1
pdb|4FTC|A Chain A, Crystal Structure Of The Chk1
pdb|4FTN|A Chain A, Crystal Structure Of The Chk1
pdb|4FTQ|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 43/152 (28%), Positives = 76/152 (50%), Gaps = 7/152 (4%)
Query: 300 VASGSYGD--LYRGTYCSQDVAIKVLKPERINSDMQKEFAQEVFIMRKVRHKNVVQFIGA 357
+ G+YG+ L + VA+K++ +R D + +E+ I + + H+NVV+F G
Sbjct: 14 LGEGAYGEVQLAVNRVTEEAVAVKIVDMKRA-VDCPENIKKEICINKMLNHENVVKFYGH 72
Query: 358 CTKPPSLCIVTEFMSGGSVYDYLHKLKGVFKLPSLLKVAIDVSKGMNYLHQNNIIHRDLK 417
+ + E+ SGG ++D + G+ + P + + G+ YLH I HRD+K
Sbjct: 73 RREGNIQYLFLEYCSGGELFDRIEPDIGMPE-PDAQRFFHQLMAGVVYLHGIGITHRDIK 131
Query: 418 AANLLMDENEVSLLLSLCLFTVSILFCGKGRE 449
NLL+DE + L + F ++ +F RE
Sbjct: 132 PENLLLDERDN---LKISDFGLATVFRYNNRE 160
>pdb|4FSN|A Chain A, Crystal Structure Of The Chk1
Length = 278
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 43/152 (28%), Positives = 76/152 (50%), Gaps = 7/152 (4%)
Query: 300 VASGSYGD--LYRGTYCSQDVAIKVLKPERINSDMQKEFAQEVFIMRKVRHKNVVQFIGA 357
+ G+YG+ L + VA+K++ +R D + +E+ I + + H+NVV+F G
Sbjct: 13 LGEGAYGEVQLAVNRVTEEAVAVKIVDMKRA-VDCPENIKKEICINKMLNHENVVKFYGH 71
Query: 358 CTKPPSLCIVTEFMSGGSVYDYLHKLKGVFKLPSLLKVAIDVSKGMNYLHQNNIIHRDLK 417
+ + E+ SGG ++D + G+ + P + + G+ YLH I HRD+K
Sbjct: 72 RREGNIQYLFLEYCSGGELFDRIEPDIGMPE-PDAQRFFHQLMAGVVYLHGIGITHRDIK 130
Query: 418 AANLLMDENEVSLLLSLCLFTVSILFCGKGRE 449
NLL+DE + L + F ++ +F RE
Sbjct: 131 PENLLLDERDN---LKISDFGLATVFRYNNRE 159
>pdb|2E9V|A Chain A, Structure Of H-Chk1 Complexed With A859017
pdb|2E9V|B Chain B, Structure Of H-Chk1 Complexed With A859017
Length = 268
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 43/152 (28%), Positives = 76/152 (50%), Gaps = 7/152 (4%)
Query: 300 VASGSYGD--LYRGTYCSQDVAIKVLKPERINSDMQKEFAQEVFIMRKVRHKNVVQFIGA 357
+ G+YG+ L + VA+K++ +R D + +E+ I + + H+NVV+F G
Sbjct: 14 LGEGAYGEVQLAVNRVTEEAVAVKIVDMKRA-VDCPENIKKEICINKMLNHENVVKFYGH 72
Query: 358 CTKPPSLCIVTEFMSGGSVYDYLHKLKGVFKLPSLLKVAIDVSKGMNYLHQNNIIHRDLK 417
+ + E+ SGG ++D + G+ + P + + G+ YLH I HRD+K
Sbjct: 73 RREGNIQYLFLEYCSGGELFDRIEPDIGMPE-PDAQRFFHQLMAGVVYLHGIGITHRDIK 131
Query: 418 AANLLMDENEVSLLLSLCLFTVSILFCGKGRE 449
NLL+DE + L + F ++ +F RE
Sbjct: 132 PENLLLDERDN---LKISDFGLATVFRYNNRE 160
>pdb|3NRM|A Chain A, Imidazo[1,2-A]pyrazine-Based Aurora Kinase Inhibitors
Length = 283
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 37/144 (25%), Positives = 70/144 (48%), Gaps = 6/144 (4%)
Query: 283 GTDVWEIDPKHLKFGSKVASGSYGDLY--RGTYCSQDVAIKVL-KPERINSDMQKEFAQE 339
G+ W ++ + G + G +G++Y R +A+KVL K + + ++ + +E
Sbjct: 4 GSRQWALE--DFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRRE 61
Query: 340 VFIMRKVRHKNVVQFIGACTKPPSLCIVTEFMSGGSVYDYLHKLKGVFKLPSLLKVAIDV 399
V I +RH N+++ G + ++ E+ G+VY L KL F ++
Sbjct: 62 VEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSK-FDEQRTATYITEL 120
Query: 400 SKGMNYLHQNNIIHRDLKAANLLM 423
+ ++Y H +IHRD+K NLL+
Sbjct: 121 ANALSYCHSKRVIHRDIKPENLLL 144
>pdb|2X8E|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2YER|A Chain A, Synthesis And Evaluation Of Triazolones As Checkpoint
Kinase 1 Inhibitors
pdb|2YEX|A Chain A, Synthesis And Evaluation Of Triazolones As Checkpoint
Kinase 1 Inhibitors
pdb|2YDK|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 276
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 43/152 (28%), Positives = 76/152 (50%), Gaps = 7/152 (4%)
Query: 300 VASGSYGD--LYRGTYCSQDVAIKVLKPERINSDMQKEFAQEVFIMRKVRHKNVVQFIGA 357
+ G+YG+ L + VA+K++ +R D + +E+ I + + H+NVV+F G
Sbjct: 15 LGEGAYGEVQLAVNRVTEEAVAVKIVDMKRA-VDCPENIKKEICINKMLNHENVVKFYGH 73
Query: 358 CTKPPSLCIVTEFMSGGSVYDYLHKLKGVFKLPSLLKVAIDVSKGMNYLHQNNIIHRDLK 417
+ + E+ SGG ++D + G+ + P + + G+ YLH I HRD+K
Sbjct: 74 RREGNIQYLFLEYCSGGELFDRIEPDIGMPE-PDAQRFFHQLMAGVVYLHGIGITHRDIK 132
Query: 418 AANLLMDENEVSLLLSLCLFTVSILFCGKGRE 449
NLL+DE + L + F ++ +F RE
Sbjct: 133 PENLLLDERDN---LKISDFGLATVFRYNNRE 161
>pdb|4FSM|A Chain A, Crystal Structure Of The Chk1
pdb|4FSQ|A Chain A, Crystal Structure Of The Chk1
pdb|4FSR|A Chain A, Crystal Structure Of The Chk1
pdb|4FT0|A Chain A, Crystal Structure Of The Chk1
pdb|4FT5|A Chain A, Crystal Structure Of The Chk1
pdb|4FT7|A Chain A, Crystal Structure Of The Chk1
pdb|4FT9|A Chain A, Crystal Structure Of The Chk1
pdb|4FTI|A Chain A, Crystal Structure Of The Chk1
pdb|4FTJ|A Chain A, Crystal Structure Of The Chk1
pdb|4FTK|A Chain A, Crystal Structure Of The Chk1
pdb|4FTL|A Chain A, Crystal Structure Of The Chk1
pdb|4FTM|A Chain A, Crystal Structure Of The Chk1
pdb|4FTO|A Chain A, Crystal Structure Of The Chk1
pdb|4FTR|A Chain A, Crystal Structure Of The Chk1
pdb|4FTT|A Chain A, Crystal Structure Of The Chk1
pdb|4FTU|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 43/152 (28%), Positives = 76/152 (50%), Gaps = 7/152 (4%)
Query: 300 VASGSYGD--LYRGTYCSQDVAIKVLKPERINSDMQKEFAQEVFIMRKVRHKNVVQFIGA 357
+ G+YG+ L + VA+K++ +R D + +E+ I + + H+NVV+F G
Sbjct: 14 LGEGAYGEVQLAVNRVTEEAVAVKIVDMKRA-VDCPENIKKEICINKMLNHENVVKFYGH 72
Query: 358 CTKPPSLCIVTEFMSGGSVYDYLHKLKGVFKLPSLLKVAIDVSKGMNYLHQNNIIHRDLK 417
+ + E+ SGG ++D + G+ + P + + G+ YLH I HRD+K
Sbjct: 73 RREGNIQYLFLEYCSGGELFDRIEPDIGMPE-PDAQRFFHQLMAGVVYLHGIGITHRDIK 131
Query: 418 AANLLMDENEVSLLLSLCLFTVSILFCGKGRE 449
NLL+DE + L + F ++ +F RE
Sbjct: 132 PENLLLDERDN---LKISDFGLATVFRYNNRE 160
>pdb|2AYP|A Chain A, Crystal Structure Of Chk1 With An Indol Inhibitor
Length = 269
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 43/152 (28%), Positives = 76/152 (50%), Gaps = 7/152 (4%)
Query: 300 VASGSYGD--LYRGTYCSQDVAIKVLKPERINSDMQKEFAQEVFIMRKVRHKNVVQFIGA 357
+ G+YG+ L + VA+K++ +R D + +E+ I + + H+NVV+F G
Sbjct: 15 LGEGAYGEVQLAVNRVTEEAVAVKIVDMKRA-VDCPENIKKEICINKMLNHENVVKFYGH 73
Query: 358 CTKPPSLCIVTEFMSGGSVYDYLHKLKGVFKLPSLLKVAIDVSKGMNYLHQNNIIHRDLK 417
+ + E+ SGG ++D + G+ + P + + G+ YLH I HRD+K
Sbjct: 74 RREGNIQYLFLEYCSGGELFDRIEPDIGMPE-PDAQRFFHQLMAGVVYLHGIGITHRDIK 132
Query: 418 AANLLMDENEVSLLLSLCLFTVSILFCGKGRE 449
NLL+DE + L + F ++ +F RE
Sbjct: 133 PENLLLDERDN---LKISDFGLATVFRYNNRE 161
>pdb|2BR1|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRB|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRG|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRH|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRM|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRN|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRO|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2C3J|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2C3K|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2C3L|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2CGU|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGV|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGW|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGX|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|3NLB|A Chain A, Novel Kinase Profile Highlights The Temporal Basis Of
Context Dependent Checkpoint Pathways To Cell Death
Length = 297
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 43/152 (28%), Positives = 76/152 (50%), Gaps = 7/152 (4%)
Query: 300 VASGSYGD--LYRGTYCSQDVAIKVLKPERINSDMQKEFAQEVFIMRKVRHKNVVQFIGA 357
+ G+YG+ L + VA+K++ +R D + +E+ I + + H+NVV+F G
Sbjct: 15 LGEGAYGEVQLAVNRVTEEAVAVKIVDMKRA-VDCPENIKKEICINKMLNHENVVKFYGH 73
Query: 358 CTKPPSLCIVTEFMSGGSVYDYLHKLKGVFKLPSLLKVAIDVSKGMNYLHQNNIIHRDLK 417
+ + E+ SGG ++D + G+ + P + + G+ YLH I HRD+K
Sbjct: 74 RREGNIQYLFLEYCSGGELFDRIEPDIGMPE-PDAQRFFHQLMAGVVYLHGIGITHRDIK 132
Query: 418 AANLLMDENEVSLLLSLCLFTVSILFCGKGRE 449
NLL+DE + L + F ++ +F RE
Sbjct: 133 PENLLLDERDN---LKISDFGLATVFRYNNRE 161
>pdb|1IA8|A Chain A, The 1.7 A Crystal Structure Of Human Cell Cycle Checkpoint
Kinase Chk1
pdb|1NVQ|A Chain A, The Complex Structure Of Checkpoint Kinase Chk1UCN-01
pdb|1NVR|A Chain A, The Complex Structure Of Checkpoint Kinase
Chk1STAUROSPORINE
pdb|1NVS|A Chain A, The Complex Structure Of Checkpoint Kinase Chk1SB218078
pdb|2WMQ|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMR|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMS|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMT|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMU|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMV|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMX|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMW|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XEY|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XF0|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XEZ|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2X8D|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2X8I|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2YM3|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM4|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM5|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM6|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM7|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM8|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YDI|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 289
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 43/152 (28%), Positives = 76/152 (50%), Gaps = 7/152 (4%)
Query: 300 VASGSYGD--LYRGTYCSQDVAIKVLKPERINSDMQKEFAQEVFIMRKVRHKNVVQFIGA 357
+ G+YG+ L + VA+K++ +R D + +E+ I + + H+NVV+F G
Sbjct: 15 LGEGAYGEVQLAVNRVTEEAVAVKIVDMKRA-VDCPENIKKEICINKMLNHENVVKFYGH 73
Query: 358 CTKPPSLCIVTEFMSGGSVYDYLHKLKGVFKLPSLLKVAIDVSKGMNYLHQNNIIHRDLK 417
+ + E+ SGG ++D + G+ + P + + G+ YLH I HRD+K
Sbjct: 74 RREGNIQYLFLEYCSGGELFDRIEPDIGMPE-PDAQRFFHQLMAGVVYLHGIGITHRDIK 132
Query: 418 AANLLMDENEVSLLLSLCLFTVSILFCGKGRE 449
NLL+DE + L + F ++ +F RE
Sbjct: 133 PENLLLDERDN---LKISDFGLATVFRYNNRE 161
>pdb|1ZLT|A Chain A, Crystal Structure Of Chk1 Complexed With A Hymenaldisine
Analog
pdb|2GDO|A Chain A, 4-(aminoalkylamino)-3-benzimidazole-quinolinones As Potent
Chk1 Inhibitors
Length = 295
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 43/152 (28%), Positives = 76/152 (50%), Gaps = 7/152 (4%)
Query: 300 VASGSYGD--LYRGTYCSQDVAIKVLKPERINSDMQKEFAQEVFIMRKVRHKNVVQFIGA 357
+ G+YG+ L + VA+K++ +R D + +E+ I + + H+NVV+F G
Sbjct: 15 LGEGAYGEVQLAVNRVTEEAVAVKIVDMKRA-VDCPENIKKEICINKMLNHENVVKFYGH 73
Query: 358 CTKPPSLCIVTEFMSGGSVYDYLHKLKGVFKLPSLLKVAIDVSKGMNYLHQNNIIHRDLK 417
+ + E+ SGG ++D + G+ + P + + G+ YLH I HRD+K
Sbjct: 74 RREGNIQYLFLEYCSGGELFDRIEPDIGMPE-PDAQRFFHQLMAGVVYLHGIGITHRDIK 132
Query: 418 AANLLMDENEVSLLLSLCLFTVSILFCGKGRE 449
NLL+DE + L + F ++ +F RE
Sbjct: 133 PENLLLDERDN---LKISDFGLATVFRYNNRE 161
>pdb|2GHG|A Chain A, H-Chk1 Complexed With A431994
pdb|2YWP|A Chain A, Crystal Structure Of Chk1 With A Urea Inhibitor
pdb|2E9N|A Chain A, Structure Of H-chk1 Complexed With A767085
pdb|2E9O|A Chain A, Structure Of H-Chk1 Complexed With Aa582939
pdb|2E9P|A Chain A, Structure Of H-Chk1 Complexed With A771129
pdb|2E9U|A Chain A, Structure Of H-Chk1 Complexed With A780125
Length = 269
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 43/152 (28%), Positives = 76/152 (50%), Gaps = 7/152 (4%)
Query: 300 VASGSYGD--LYRGTYCSQDVAIKVLKPERINSDMQKEFAQEVFIMRKVRHKNVVQFIGA 357
+ G+YG+ L + VA+K++ +R D + +E+ I + + H+NVV+F G
Sbjct: 14 LGEGAYGEVQLAVNRVTEEAVAVKIVDMKRA-VDCPENIKKEICINKMLNHENVVKFYGH 72
Query: 358 CTKPPSLCIVTEFMSGGSVYDYLHKLKGVFKLPSLLKVAIDVSKGMNYLHQNNIIHRDLK 417
+ + E+ SGG ++D + G+ + P + + G+ YLH I HRD+K
Sbjct: 73 RREGNIQYLFLEYCSGGELFDRIEPDIGMPE-PDAQRFFHQLMAGVVYLHGIGITHRDIK 131
Query: 418 AANLLMDENEVSLLLSLCLFTVSILFCGKGRE 449
NLL+DE + L + F ++ +F RE
Sbjct: 132 PENLLLDERDN---LKISDFGLATVFRYNNRE 160
>pdb|3SRV|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase (Syk) In
Complex With A Diaminopyrimidine Carboxamide Inhibitor
Length = 277
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 44/140 (31%), Positives = 78/140 (55%), Gaps = 7/140 (5%)
Query: 289 IDPKHLKFGSK-VASGSYGDLYRGTY----CSQDVAIKVLKPERINSDMQKEFAQEVFIM 343
+D K L K + SG++G + +G Y + VA+K+LK E + ++ E E +M
Sbjct: 7 LDRKLLTLEDKELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVM 66
Query: 344 RKVRHKNVVQFIGACTKPPSLCIVTEFMSGGSVYDYLHKLKGVFKLPSLLKVAIDVSKGM 403
+++ + +V+ IG C + S +V E G + YL + + V K +++++ VS GM
Sbjct: 67 QQLDNPYIVRMIGIC-EAESWMLVMEMAELGPLNKYLQQNRHV-KDKNIIELVHQVSMGM 124
Query: 404 NYLHQNNIIHRDLKAANLLM 423
YL ++N +HRDL A N+L+
Sbjct: 125 KYLEESNFVHRDLAARNVLL 144
>pdb|3DAJ|A Chain A, Crystal Structure Of Aurora A Complexed With An Inhibitor
Discovered Through Site-Directed Dynamic Tethering
Length = 272
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 36/133 (27%), Positives = 65/133 (48%), Gaps = 4/133 (3%)
Query: 297 GSKVASGSYGDLY--RGTYCSQDVAIKVL-KPERINSDMQKEFAQEVFIMRKVRHKNVVQ 353
G + G +G++Y R +A+KVL K + + ++ + +EV I +RH N+++
Sbjct: 17 GRPLGKGKFGNVYLARERQSKFILALKVLFKTQLEKAGVEHQLRREVEIQSHLRHPNILR 76
Query: 354 FIGACTKPPSLCIVTEFMSGGSVYDYLHKLKGVFKLPSLLKVAIDVSKGMNYLHQNNIIH 413
G + ++ E+ G+VY L KL F +++ ++Y H +IH
Sbjct: 77 LYGYFHDATRVYLILEYAPLGTVYRELQKL-SRFDEQRTATYITELANALSYCHSKRVIH 135
Query: 414 RDLKAANLLMDEN 426
RD+K NLL+ N
Sbjct: 136 RDIKPENLLLGSN 148
>pdb|3OT3|A Chain A, X-Ray Crystal Structure Of Compound 22k Bound To Human
Chk1 Kinase Domain
pdb|3OT8|A Chain A, X-Ray Crystal Structure Of Compound 17r Bound To Human
Chk1 Kinase Domain
pdb|3PA3|A Chain A, X-Ray Crystal Structure Of Compound 70 Bound To Human Chk1
Kinase Domain
pdb|3PA4|A Chain A, X-Ray Crystal Structure Of Compound 2a Bound To Human Chk1
Kinase Domain
pdb|3PA5|A Chain A, X-Ray Crystal Structure Of Compound 1 Bound To Human Chk1
Kinase Domain
pdb|3U9N|A Chain A, X-Ray Crystal Structure Of Compound 1 Bound To Human Chk1
Kinase Domain
Length = 273
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 43/152 (28%), Positives = 76/152 (50%), Gaps = 7/152 (4%)
Query: 300 VASGSYGD--LYRGTYCSQDVAIKVLKPERINSDMQKEFAQEVFIMRKVRHKNVVQFIGA 357
+ G+YG+ L + VA+K++ +R D + +E+ I + + H+NVV+F G
Sbjct: 14 LGEGAYGEVQLAVNRVTEEAVAVKIVDMKRA-VDCPENIKKEICINKMLNHENVVKFYGH 72
Query: 358 CTKPPSLCIVTEFMSGGSVYDYLHKLKGVFKLPSLLKVAIDVSKGMNYLHQNNIIHRDLK 417
+ + E+ SGG ++D + G+ + P + + G+ YLH I HRD+K
Sbjct: 73 RREGNIQYLFLEYCSGGELFDRIEPDIGMPE-PDAQRFFHQLMAGVVYLHGIGITHRDIK 131
Query: 418 AANLLMDENEVSLLLSLCLFTVSILFCGKGRE 449
NLL+DE + L + F ++ +F RE
Sbjct: 132 PENLLLDERDN---LKISDFGLATVFRYNNRE 160
>pdb|3D14|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly,
Lys240->arg, Met302- >leu) In Complex With
1-{5-[2-(Thieno[3,2-D]pyrimidin-4-Ylamino)- Ethyl]-
Thiazol-2-Yl}-3-(3-Trifluoromethyl-Phenyl)-Urea
pdb|3DJ5|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 290.
pdb|3DJ6|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 823.
pdb|3DJ7|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 130.
pdb|3D15|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With
1-(3-Chloro-Phenyl)-3-
{5-[2-(Thieno[3,2-D]pyrimidin-4-Ylamino)-
Ethyl]-Thiazol-2- Yl}-Urea [sns-314]
pdb|3D2I|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With 1-{5-[2-(1-Methyl-1h-
Pyrazolo[4,
3-D]pyrimidin-7-Ylamino)-Ethyl]-Thiazol-2-Yl}-3-
(3-Trifluoromethyl-Phenyl)-Urea
pdb|3D2K|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With
[7-(2-{2-[3-(3-Chloro-
Phenyl)-Ureido]-Thiazol-5-Yl}-Ethylamino)-Pyrazolo[4,3-
D]pyrimidin-1-Yl]-Acetic Acid
Length = 272
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 36/133 (27%), Positives = 65/133 (48%), Gaps = 4/133 (3%)
Query: 297 GSKVASGSYGDLY--RGTYCSQDVAIKVL-KPERINSDMQKEFAQEVFIMRKVRHKNVVQ 353
G + G +G++Y R +A+KVL K + + ++ + +EV I +RH N+++
Sbjct: 17 GRPLGKGKFGNVYLARERQSKFILALKVLFKTQLEKAGVEHQLRREVEIQSHLRHPNILR 76
Query: 354 FIGACTKPPSLCIVTEFMSGGSVYDYLHKLKGVFKLPSLLKVAIDVSKGMNYLHQNNIIH 413
G + ++ E+ G+VY L KL F +++ ++Y H +IH
Sbjct: 77 LYGYFHDATRVYLILEYAPLGTVYRELQKL-SRFDEQRTATYITELANALSYCHSKRVIH 135
Query: 414 RDLKAANLLMDEN 426
RD+K NLL+ N
Sbjct: 136 RDIKPENLLLGSN 148
>pdb|3JVR|A Chain A, Characterization Of The Chk1 Allosteric Inhibitor Binding
Site
pdb|3JVS|A Chain A, Characterization Of The Chk1 Allosteric Inhibitor Binding
Site
Length = 271
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 43/152 (28%), Positives = 76/152 (50%), Gaps = 7/152 (4%)
Query: 300 VASGSYGD--LYRGTYCSQDVAIKVLKPERINSDMQKEFAQEVFIMRKVRHKNVVQFIGA 357
+ G+YG+ L + VA+K++ +R D + +E+ I + + H+NVV+F G
Sbjct: 14 LGEGAYGEVQLAVNRVTEEAVAVKIVDMKRA-VDCPENIKKEICINKMLNHENVVKFYGH 72
Query: 358 CTKPPSLCIVTEFMSGGSVYDYLHKLKGVFKLPSLLKVAIDVSKGMNYLHQNNIIHRDLK 417
+ + E+ SGG ++D + G+ + P + + G+ YLH I HRD+K
Sbjct: 73 RREGNIQYLFLEYCSGGELFDRIEPDIGMPE-PDAQRFFHQLMAGVVYLHGIGITHRDIK 131
Query: 418 AANLLMDENEVSLLLSLCLFTVSILFCGKGRE 449
NLL+DE + L + F ++ +F RE
Sbjct: 132 PENLLLDERDN---LKISDFGLATVFRYNNRE 160
>pdb|4F4P|A Chain A, Syk In Complex With Ligand Lasw836
Length = 273
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 44/140 (31%), Positives = 78/140 (55%), Gaps = 7/140 (5%)
Query: 289 IDPKHLKFGSK-VASGSYGDLYRGTY----CSQDVAIKVLKPERINSDMQKEFAQEVFIM 343
+D K L K + SG++G + +G Y + VA+K+LK E + ++ E E +M
Sbjct: 1 LDRKLLTLEDKELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVM 60
Query: 344 RKVRHKNVVQFIGACTKPPSLCIVTEFMSGGSVYDYLHKLKGVFKLPSLLKVAIDVSKGM 403
+++ + +V+ IG C + S +V E G + YL + + V K +++++ VS GM
Sbjct: 61 QQLDNPYIVRMIGIC-EAESWMLVMEMAELGPLNKYLQQNRHV-KDKNIIELVHQVSMGM 118
Query: 404 NYLHQNNIIHRDLKAANLLM 423
YL ++N +HRDL A N+L+
Sbjct: 119 KYLEESNFVHRDLAARNVLL 138
>pdb|3SRV|B Chain B, Crystal Structure Of Spleen Tyrosine Kinase (Syk) In
Complex With A Diaminopyrimidine Carboxamide Inhibitor
Length = 277
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 44/140 (31%), Positives = 78/140 (55%), Gaps = 7/140 (5%)
Query: 289 IDPKHLKFGSK-VASGSYGDLYRGTY----CSQDVAIKVLKPERINSDMQKEFAQEVFIM 343
+D K L K + SG++G + +G Y + VA+K+LK E + ++ E E +M
Sbjct: 7 LDRKLLTLEDKELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVM 66
Query: 344 RKVRHKNVVQFIGACTKPPSLCIVTEFMSGGSVYDYLHKLKGVFKLPSLLKVAIDVSKGM 403
+++ + +V+ IG C + S +V E G + YL + + V K +++++ VS GM
Sbjct: 67 QQLDNPYIVRMIGIC-EAESWMLVMEMAELGPLNKYLQQNRHV-KDKNIIELVHQVSMGM 124
Query: 404 NYLHQNNIIHRDLKAANLLM 423
YL ++N +HRDL A N+L+
Sbjct: 125 KYLEESNFVHRDLAARNVLL 144
>pdb|4FVR|A Chain A, Crystal Structure Of The Jak2 Pseudokinase Domain Mutant
V617f (Mg- Atp-Bound Form)
Length = 289
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 38/131 (29%), Positives = 67/131 (51%), Gaps = 7/131 (5%)
Query: 297 GSKVASGSYGDLYRGTYCSQDVAIKVLKPERINSDMQKEFAQEVFIMRKVRHKNVVQFIG 356
G + G YG L+ +V +KVL ++ + + + F + +M K+ HK++V G
Sbjct: 27 GVRREVGDYGQLHE-----TEVLLKVL--DKAHRNYSESFFEAASMMSKLSHKHLVLNYG 79
Query: 357 ACTKPPSLCIVTEFMSGGSVYDYLHKLKGVFKLPSLLKVAIDVSKGMNYLHQNNIIHRDL 416
C +V EF+ GS+ YL K K + L+VA ++ M++L +N +IH ++
Sbjct: 80 VCFCGDENILVQEFVKFGSLDTYLKKNKNCINILWKLEVAKQLAWAMHFLEENTLIHGNV 139
Query: 417 KAANLLMDENE 427
A N+L+ E
Sbjct: 140 CAKNILLIREE 150
>pdb|4DFL|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
A Sulfonamidopyrazine Piperidine Inhibitor
pdb|4DFN|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
An Adamantylpyrazine Inhibitor
Length = 274
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 44/140 (31%), Positives = 78/140 (55%), Gaps = 7/140 (5%)
Query: 289 IDPKHLKFGSK-VASGSYGDLYRGTY----CSQDVAIKVLKPERINSDMQKEFAQEVFIM 343
+D K L K + SG++G + +G Y + VA+K+LK E + ++ E E +M
Sbjct: 3 LDRKLLTLEDKELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVM 62
Query: 344 RKVRHKNVVQFIGACTKPPSLCIVTEFMSGGSVYDYLHKLKGVFKLPSLLKVAIDVSKGM 403
+++ + +V+ IG C + S +V E G + YL + + V K +++++ VS GM
Sbjct: 63 QQLDNPYIVRMIGIC-EAESWMLVMEMAELGPLNKYLQQNRHV-KDKNIIELVHQVSMGM 120
Query: 404 NYLHQNNIIHRDLKAANLLM 423
YL ++N +HRDL A N+L+
Sbjct: 121 KYLEESNFVHRDLAARNVLL 140
>pdb|2Y7J|A Chain A, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|B Chain B, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|C Chain C, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|D Chain D, Structure Of Human Phosphorylase Kinase, Gamma 2
Length = 365
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 47/166 (28%), Positives = 83/166 (50%), Gaps = 8/166 (4%)
Query: 290 DPKHLKFGSKVASGSYGDLYRGTYCSQDVAIKVLKPERINSDMQKEFAQ----EVFIMRK 345
DPK + G V+S ++R T V I + ER++ + +E + E I+R+
Sbjct: 97 DPKDV-IGRGVSSVVRRCVHRATGHEFAVKIMEVTAERLSPEQLEEVREATRRETHILRQ 155
Query: 346 VR-HKNVVQFIGACTKPPSLCIVTEFMSGGSVYDYLHKLKGVFKLPSLLKVAIDVSKGMN 404
V H +++ I + + +V + M G ++DYL + K + + + ++
Sbjct: 156 VAGHPHIITLIDSYESSSFMFLVFDLMRKGELFDYLTE-KVALSEKETRSIMRSLLEAVS 214
Query: 405 YLHQNNIIHRDLKAANLLMDENEVSLLLSLCLFTVSILFCGKGREL 450
+LH NNI+HRDLK N+L+D+N + + LS F+ + K REL
Sbjct: 215 FLHANNIVHRDLKPENILLDDN-MQIRLSDFGFSCHLEPGEKLREL 259
>pdb|3HA6|A Chain A, Crystal Structure Of Aurora A In Complex With Tpx2 And
Compound 10
Length = 268
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 37/144 (25%), Positives = 69/144 (47%), Gaps = 6/144 (4%)
Query: 283 GTDVWEIDPKHLKFGSKVASGSYGDLY--RGTYCSQDVAIKVL-KPERINSDMQKEFAQE 339
G W ++ + G + G +G++Y R +A+KVL K + + ++ + +E
Sbjct: 1 GKRQWALE--DFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRRE 58
Query: 340 VFIMRKVRHKNVVQFIGACTKPPSLCIVTEFMSGGSVYDYLHKLKGVFKLPSLLKVAIDV 399
V I +RH N+++ G + ++ E+ G+VY L KL F ++
Sbjct: 59 VEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSK-FDEQRTATYITEL 117
Query: 400 SKGMNYLHQNNIIHRDLKAANLLM 423
+ ++Y H +IHRD+K NLL+
Sbjct: 118 ANALSYCHSKRVIHRDIKPENLLL 141
>pdb|3E5A|A Chain A, Crystal Structure Of Aurora A In Complex With Vx-680 And
Tpx2
Length = 268
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 37/144 (25%), Positives = 69/144 (47%), Gaps = 6/144 (4%)
Query: 283 GTDVWEIDPKHLKFGSKVASGSYGDLY--RGTYCSQDVAIKVL-KPERINSDMQKEFAQE 339
G W ++ + G + G +G++Y R +A+KVL K + + ++ + +E
Sbjct: 1 GKRQWALE--DFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRRE 58
Query: 340 VFIMRKVRHKNVVQFIGACTKPPSLCIVTEFMSGGSVYDYLHKLKGVFKLPSLLKVAIDV 399
V I +RH N+++ G + ++ E+ G+VY L KL F ++
Sbjct: 59 VEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSK-FDEQRTATYITEL 117
Query: 400 SKGMNYLHQNNIIHRDLKAANLLM 423
+ ++Y H +IHRD+K NLL+
Sbjct: 118 ANALSYCHSKRVIHRDIKPENLLL 141
>pdb|2XRU|A Chain A, Aurora-A T288e Complexed With Pha-828300
Length = 280
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 37/144 (25%), Positives = 69/144 (47%), Gaps = 6/144 (4%)
Query: 283 GTDVWEIDPKHLKFGSKVASGSYGDLY--RGTYCSQDVAIKVL-KPERINSDMQKEFAQE 339
G W ++ + G + G +G++Y R +A+KVL K + + ++ + +E
Sbjct: 1 GPRQWALE--DFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRRE 58
Query: 340 VFIMRKVRHKNVVQFIGACTKPPSLCIVTEFMSGGSVYDYLHKLKGVFKLPSLLKVAIDV 399
V I +RH N+++ G + ++ E+ G+VY L KL F ++
Sbjct: 59 VEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSK-FDEQRTATYITEL 117
Query: 400 SKGMNYLHQNNIIHRDLKAANLLM 423
+ ++Y H +IHRD+K NLL+
Sbjct: 118 ANALSYCHSKRVIHRDIKPENLLL 141
>pdb|2J50|A Chain A, Structure Of Aurora-2 In Complex With Pha-739358
pdb|2J50|B Chain B, Structure Of Aurora-2 In Complex With Pha-739358
Length = 280
Score = 56.6 bits (135), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 37/144 (25%), Positives = 69/144 (47%), Gaps = 6/144 (4%)
Query: 283 GTDVWEIDPKHLKFGSKVASGSYGDLY--RGTYCSQDVAIKVL-KPERINSDMQKEFAQE 339
G W ++ + G + G +G++Y R +A+KVL K + + ++ + +E
Sbjct: 1 GPRQWALE--DFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRRE 58
Query: 340 VFIMRKVRHKNVVQFIGACTKPPSLCIVTEFMSGGSVYDYLHKLKGVFKLPSLLKVAIDV 399
V I +RH N+++ G + ++ E+ G+VY L KL F ++
Sbjct: 59 VEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSK-FDEQRTATYITEL 117
Query: 400 SKGMNYLHQNNIIHRDLKAANLLM 423
+ ++Y H +IHRD+K NLL+
Sbjct: 118 ANALSYCHSKRVIHRDIKPENLLL 141
>pdb|2CDZ|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With Cgp74514a
pdb|2J0I|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4
Length = 303
Score = 56.6 bits (135), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 44/167 (26%), Positives = 77/167 (46%), Gaps = 8/167 (4%)
Query: 258 SSSPTSEPEDTGMKSHPYHLKIPNDGTDVWEIDPK-HLKFGSKVASGSYGDLYRGTYCSQ 316
SSP EP+ + L++ D D P+ +L K+ GS G + T S
Sbjct: 1 GSSPQREPQRVSHEQFRAALQLVVDPGD-----PRSYLDNFIKIGEGSTGIVCIATVRSS 55
Query: 317 DVAIKVLKPERINSDMQKEFAQEVFIMRKVRHKNVVQFIGACTKPPSLCIVTEFMSGGSV 376
+ V K + ++ EV IMR +H+NVV+ + L +V EF+ GG++
Sbjct: 56 GKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSYLVGDELWVVMEFLEGGAL 115
Query: 377 YDYLHKLKGVFKLPSLLKVAIDVSKGMNYLHQNNIIHRDLKAANLLM 423
D + + + V + V + ++ LH +IHRD+K+ ++L+
Sbjct: 116 TDIVTHTR--MNEEQIAAVCLAVLQALSVLHAQGVIHRDIKSDSILL 160
>pdb|2J4Z|A Chain A, Structure Of Aurora-2 In Complex With Pha-680626
pdb|2J4Z|B Chain B, Structure Of Aurora-2 In Complex With Pha-680626
Length = 306
Score = 56.6 bits (135), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 35/133 (26%), Positives = 65/133 (48%), Gaps = 4/133 (3%)
Query: 294 LKFGSKVASGSYGDLY--RGTYCSQDVAIKVL-KPERINSDMQKEFAQEVFIMRKVRHKN 350
+ G + G +G++Y R +A+KVL K + + ++ + +EV I +RH N
Sbjct: 36 FEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPN 95
Query: 351 VVQFIGACTKPPSLCIVTEFMSGGSVYDYLHKLKGVFKLPSLLKVAIDVSKGMNYLHQNN 410
+++ G + ++ E+ G+VY L KL F +++ ++Y H
Sbjct: 96 ILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSK-FDEQRTATYITELANALSYCHSKR 154
Query: 411 IIHRDLKAANLLM 423
+IHRD+K NLL+
Sbjct: 155 VIHRDIKPENLLL 167
>pdb|2BMC|A Chain A, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|B Chain B, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|C Chain C, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|D Chain D, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|E Chain E, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|F Chain F, Aurora-2 T287d T288d Complexed With Pha-680632
Length = 306
Score = 56.6 bits (135), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 35/133 (26%), Positives = 65/133 (48%), Gaps = 4/133 (3%)
Query: 294 LKFGSKVASGSYGDLY--RGTYCSQDVAIKVL-KPERINSDMQKEFAQEVFIMRKVRHKN 350
+ G + G +G++Y R +A+KVL K + + ++ + +EV I +RH N
Sbjct: 36 FEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPN 95
Query: 351 VVQFIGACTKPPSLCIVTEFMSGGSVYDYLHKLKGVFKLPSLLKVAIDVSKGMNYLHQNN 410
+++ G + ++ E+ G+VY L KL F +++ ++Y H
Sbjct: 96 ILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSK-FDEQRTATYITELANALSYCHSKR 154
Query: 411 IIHRDLKAANLLM 423
+IHRD+K NLL+
Sbjct: 155 VIHRDIKPENLLL 167
>pdb|3UDB|A Chain A, Crystal Structure Of Snrk2.6
pdb|3UDB|B Chain B, Crystal Structure Of Snrk2.6
pdb|3UDB|C Chain C, Crystal Structure Of Snrk2.6
pdb|3UDB|D Chain D, Crystal Structure Of Snrk2.6
pdb|3UDB|E Chain E, Crystal Structure Of Snrk2.6
pdb|3UDB|F Chain F, Crystal Structure Of Snrk2.6
Length = 317
Score = 56.6 bits (135), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 37/128 (28%), Positives = 65/128 (50%), Gaps = 8/128 (6%)
Query: 300 VASGSYG--DLYRGTYCSQDVAIKVL-KPERINSDMQKEFAQEVFIMRKVRHKNVVQFIG 356
+ +G++G L R ++ VA+K + + E+I+ ++++E R +RH N+V+F
Sbjct: 27 IGAGNFGVARLMRDKQANELVAVKYIERGEKIDENVKREIINH----RSLRHPNIVRFKE 82
Query: 357 ACTKPPSLCIVTEFMSGGSVYDYLHKLKGVFKLPSLLKVAIDVSKGMNYLHQNNIIHRDL 416
P L IV E+ SGG +++ + G F + G++Y H + HRDL
Sbjct: 83 VILTPTHLAIVMEYASGGELFERICN-AGRFSEDEARFFFQQLISGVSYAHAMQVAHRDL 141
Query: 417 KAANLLMD 424
K N L+D
Sbjct: 142 KLENTLLD 149
>pdb|1MUO|A Chain A, Crystal Structure Of Aurora-2, An Oncogenic Serine-
Threonine Kinase
Length = 297
Score = 56.6 bits (135), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 35/133 (26%), Positives = 65/133 (48%), Gaps = 4/133 (3%)
Query: 294 LKFGSKVASGSYGDLY--RGTYCSQDVAIKVL-KPERINSDMQKEFAQEVFIMRKVRHKN 350
+ G + G +G++Y R +A+KVL K + + ++ + +EV I +RH N
Sbjct: 27 FEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPN 86
Query: 351 VVQFIGACTKPPSLCIVTEFMSGGSVYDYLHKLKGVFKLPSLLKVAIDVSKGMNYLHQNN 410
+++ G + ++ E+ G+VY L KL F +++ ++Y H
Sbjct: 87 ILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSK-FDEQRTATYITELANALSYCHSKR 145
Query: 411 IIHRDLKAANLLM 423
+IHRD+K NLL+
Sbjct: 146 VIHRDIKPENLLL 158
>pdb|2WTV|A Chain A, Aurora-A Inhibitor Structure
pdb|2WTV|B Chain B, Aurora-A Inhibitor Structure
pdb|2WTV|C Chain C, Aurora-A Inhibitor Structure
pdb|2WTV|D Chain D, Aurora-A Inhibitor Structure
Length = 285
Score = 56.6 bits (135), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 35/133 (26%), Positives = 64/133 (48%), Gaps = 4/133 (3%)
Query: 294 LKFGSKVASGSYGDLY--RGTYCSQDVAIKVL-KPERINSDMQKEFAQEVFIMRKVRHKN 350
+ G + G +G++Y R +A+KVL K + + ++ + +EV I +RH N
Sbjct: 15 FEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPN 74
Query: 351 VVQFIGACTKPPSLCIVTEFMSGGSVYDYLHKLKGVFKLPSLLKVAIDVSKGMNYLHQNN 410
+++ G + ++ E+ G VY L KL F +++ ++Y H
Sbjct: 75 ILRLYGYFHDATRVYLILEYAPRGEVYKELQKLSK-FDEQRTATYITELANALSYCHSKR 133
Query: 411 IIHRDLKAANLLM 423
+IHRD+K NLL+
Sbjct: 134 VIHRDIKPENLLL 146
>pdb|3ALN|A Chain A, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALN|B Chain B, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALN|C Chain C, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALO|A Chain A, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Ternary Complex With Amp-Pnp And P38 Peptide
pdb|3VUT|A Chain A, Crystal Structures Of Non-Phosphorylated Map2k4
pdb|3VUT|B Chain B, Crystal Structures Of Non-Phosphorylated Map2k4
Length = 327
Score = 56.2 bits (134), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 46/161 (28%), Positives = 79/161 (49%), Gaps = 11/161 (6%)
Query: 287 WEIDPKHLKFGSKVASGSYGDLYRGTY--CSQDVAIKVLKPERINSDMQKEFAQEV-FIM 343
W+ + LK ++ G+YG + + + Q +A+K ++ ++ QK+ ++ +M
Sbjct: 17 WDFTAEDLKDLGEIGRGAYGSVNKMVHKPSGQIMAVKRIR-STVDEKEQKQLLMDLDVVM 75
Query: 344 RKVRHKNVVQFIGACTKPPSLCIVTEFMSGG--SVYDYLHK-LKGVFKLPSLLKVAIDVS 400
R +VQF GA + I E MS Y Y++ L V L K+ +
Sbjct: 76 RSSDCPYIVQFYGALFREGDCWICMELMSTSFDKFYKYVYSVLDDVIPEEILGKITLATV 135
Query: 401 KGMNYLHQN-NIIHRDLKAANLLMDENEVSLLLSLCLFTVS 440
K +N+L +N IIHRD+K +N+L+D S + LC F +S
Sbjct: 136 KALNHLKENLKIIHRDIKPSNILLDR---SGNIKLCDFGIS 173
>pdb|3DAE|A Chain A, Crystal Structure Of Phosphorylated Snf1 Kinase Domain
pdb|3DAE|B Chain B, Crystal Structure Of Phosphorylated Snf1 Kinase Domain
Length = 283
Score = 56.2 bits (134), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 35/130 (26%), Positives = 69/130 (53%), Gaps = 5/130 (3%)
Query: 300 VASGSYGD--LYRGTYCSQDVAIKVLKPERI-NSDMQKEFAQEVFIMRKVRHKNVVQFIG 356
+ GS+G L T Q VA+K++ + + SDMQ +E+ +R +RH ++++
Sbjct: 22 LGEGSFGKVKLAYHTTTGQKVALKIINKKVLAKSDMQGRIEREISYLRLLRHPHIIKLYD 81
Query: 357 ACTKPPSLCIVTEFMSGGSVYDYLHKLKGVFKLPSLLKVAIDVSKGMNYLHQNNIIHRDL 416
+ +V E+ +G ++DY+ + + + + + + + Y H++ I+HRDL
Sbjct: 82 VIKSKDEIIMVIEY-AGNELFDYIVQRDKMSEQEAR-RFFQQIISAVEYCHRHKIVHRDL 139
Query: 417 KAANLLMDEN 426
K NLL+DE+
Sbjct: 140 KPENLLLDEH 149
>pdb|2XNE|A Chain A, Structure Of Aurora-A Bound To An Imidazopyrazine
Inhibitor
Length = 272
Score = 56.2 bits (134), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 35/133 (26%), Positives = 65/133 (48%), Gaps = 4/133 (3%)
Query: 294 LKFGSKVASGSYGDLY--RGTYCSQDVAIKVL-KPERINSDMQKEFAQEVFIMRKVRHKN 350
+ G + G +G++Y R +A+KVL K + + ++ + +EV I +RH N
Sbjct: 13 FEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPN 72
Query: 351 VVQFIGACTKPPSLCIVTEFMSGGSVYDYLHKLKGVFKLPSLLKVAIDVSKGMNYLHQNN 410
+++ G + ++ E+ G+VY L KL F +++ ++Y H
Sbjct: 73 ILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSK-FDEQRTATYITELANALSYCHSKR 131
Query: 411 IIHRDLKAANLLM 423
+IHRD+K NLL+
Sbjct: 132 VIHRDIKPENLLL 144
>pdb|2DWB|A Chain A, Aurora-A Kinase Complexed With Amppnp
Length = 285
Score = 56.2 bits (134), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 35/133 (26%), Positives = 65/133 (48%), Gaps = 4/133 (3%)
Query: 294 LKFGSKVASGSYGDLY--RGTYCSQDVAIKVL-KPERINSDMQKEFAQEVFIMRKVRHKN 350
+ G + G +G++Y R +A+KVL K + + ++ + +EV I +RH N
Sbjct: 15 FEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPN 74
Query: 351 VVQFIGACTKPPSLCIVTEFMSGGSVYDYLHKLKGVFKLPSLLKVAIDVSKGMNYLHQNN 410
+++ G + ++ E+ G+VY L KL F +++ ++Y H
Sbjct: 75 ILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSK-FDEQRTATYITELANALSYCHSKR 133
Query: 411 IIHRDLKAANLLM 423
+IHRD+K NLL+
Sbjct: 134 VIHRDIKPENLLL 146
>pdb|3MN3|A Chain A, An Inhibited Conformation For The Protein Kinase Domain Of
The Saccharomyces Cerevisiae Ampk Homolog Snf1
Length = 271
Score = 56.2 bits (134), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 35/130 (26%), Positives = 69/130 (53%), Gaps = 5/130 (3%)
Query: 300 VASGSYGD--LYRGTYCSQDVAIKVLKPERI-NSDMQKEFAQEVFIMRKVRHKNVVQFIG 356
+ GS+G L T Q VA+K++ + + SDMQ +E+ +R +RH ++++
Sbjct: 12 LGEGSFGKVKLAYHTTTGQKVALKIINKKVLAKSDMQGRIEREISYLRLLRHPHIIKLYD 71
Query: 357 ACTKPPSLCIVTEFMSGGSVYDYLHKLKGVFKLPSLLKVAIDVSKGMNYLHQNNIIHRDL 416
+ +V E+ +G ++DY+ + + + + + + + Y H++ I+HRDL
Sbjct: 72 VIKSKDEIIMVIEY-AGNELFDYIVQRDKMSEQEAR-RFFQQIISAVEYCHRHKIVHRDL 129
Query: 417 KAANLLMDEN 426
K NLL+DE+
Sbjct: 130 KPENLLLDEH 139
>pdb|2FH9|A Chain A, Structure And Dimerization Of The Kinase Domain From Yeast
Snf1
Length = 274
Score = 56.2 bits (134), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 35/130 (26%), Positives = 67/130 (51%), Gaps = 5/130 (3%)
Query: 300 VASGSYGD--LYRGTYCSQDVAIKVLKPERI-NSDMQKEFAQEVFIMRKVRHKNVVQFIG 356
+ GS+G L T Q VA+K++ + + SDMQ +E+ +R +RH ++++
Sbjct: 16 LGEGSFGKVKLAYHTTTGQKVALKIINKKVLAKSDMQGRIEREISYLRLLRHPHIIKLYD 75
Query: 357 ACTKPPSLCIVTEFMSGGSVYDYLHKLKGVFKLPSLLKVAIDVSKGMNYLHQNNIIHRDL 416
+ +V E+ +G ++DY+ + + + + + Y H++ I+HRDL
Sbjct: 76 VIKSKDEIIMVIEY-AGNELFDYIVQ-RDKMSEQEARRFFQQIISAVEYCHRHKIVHRDL 133
Query: 417 KAANLLMDEN 426
K NLL+DE+
Sbjct: 134 KPENLLLDEH 143
>pdb|2C6D|A Chain A, Aurora A Kinase Activated Mutant (T287d) In Complex With
Adpnp
Length = 275
Score = 56.2 bits (134), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 35/133 (26%), Positives = 65/133 (48%), Gaps = 4/133 (3%)
Query: 294 LKFGSKVASGSYGDLY--RGTYCSQDVAIKVL-KPERINSDMQKEFAQEVFIMRKVRHKN 350
+ G + G +G++Y R +A+KVL K + + ++ + +EV I +RH N
Sbjct: 10 FEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPN 69
Query: 351 VVQFIGACTKPPSLCIVTEFMSGGSVYDYLHKLKGVFKLPSLLKVAIDVSKGMNYLHQNN 410
+++ G + ++ E+ G+VY L KL F +++ ++Y H
Sbjct: 70 ILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSK-FDEQRTATYITELANALSYCHSKR 128
Query: 411 IIHRDLKAANLLM 423
+IHRD+K NLL+
Sbjct: 129 VIHRDIKPENLLL 141
>pdb|3O50|A Chain A, Crystal Structure Of Benzamide 9 Bound To Auroraa
pdb|3O50|B Chain B, Crystal Structure Of Benzamide 9 Bound To Auroraa
pdb|3O51|A Chain A, Crystal Structure Of Anthranilamide 10 Bound To Auroraa
pdb|3EFW|A Chain A, Structure Of Auroraa With Pyridyl-Pyrimidine Urea
Inhibitor
pdb|3EFW|B Chain B, Structure Of Auroraa With Pyridyl-Pyrimidine Urea
Inhibitor
Length = 267
Score = 56.2 bits (134), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 35/133 (26%), Positives = 65/133 (48%), Gaps = 4/133 (3%)
Query: 294 LKFGSKVASGSYGDLY--RGTYCSQDVAIKVL-KPERINSDMQKEFAQEVFIMRKVRHKN 350
+ G + G +G++Y R +A+KVL K + + ++ + +EV I +RH N
Sbjct: 9 FEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPN 68
Query: 351 VVQFIGACTKPPSLCIVTEFMSGGSVYDYLHKLKGVFKLPSLLKVAIDVSKGMNYLHQNN 410
+++ G + ++ E+ G+VY L KL F +++ ++Y H
Sbjct: 69 ILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSK-FDEQRTATYITELANALSYCHSKR 127
Query: 411 IIHRDLKAANLLM 423
+IHRD+K NLL+
Sbjct: 128 VIHRDIKPENLLL 140
>pdb|3LAU|A Chain A, Crystal Structure Of Aurora2 Kinase In Complex With A
Gsk3beta Inhibitor
Length = 287
Score = 56.2 bits (134), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 35/133 (26%), Positives = 65/133 (48%), Gaps = 4/133 (3%)
Query: 294 LKFGSKVASGSYGDLY--RGTYCSQDVAIKVL-KPERINSDMQKEFAQEVFIMRKVRHKN 350
+ G + G +G++Y R +A+KVL K + + ++ + +EV I +RH N
Sbjct: 10 FEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPN 69
Query: 351 VVQFIGACTKPPSLCIVTEFMSGGSVYDYLHKLKGVFKLPSLLKVAIDVSKGMNYLHQNN 410
+++ G + ++ E+ G+VY L KL F +++ ++Y H
Sbjct: 70 ILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSK-FDEQRTATYITELANALSYCHSKR 128
Query: 411 IIHRDLKAANLLM 423
+IHRD+K NLL+
Sbjct: 129 VIHRDIKPENLLL 141
>pdb|1OL5|A Chain A, Structure Of Aurora-A 122-403, Phosphorylated On Thr287,
Thr288 And Bound To Tpx2 1-43
pdb|1OL7|A Chain A, Structure Of Human Aurora-A 122-403 Phosphorylated On
Thr287, Thr288
Length = 282
Score = 56.2 bits (134), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 35/133 (26%), Positives = 65/133 (48%), Gaps = 4/133 (3%)
Query: 294 LKFGSKVASGSYGDLY--RGTYCSQDVAIKVL-KPERINSDMQKEFAQEVFIMRKVRHKN 350
+ G + G +G++Y R +A+KVL K + + ++ + +EV I +RH N
Sbjct: 12 FEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPN 71
Query: 351 VVQFIGACTKPPSLCIVTEFMSGGSVYDYLHKLKGVFKLPSLLKVAIDVSKGMNYLHQNN 410
+++ G + ++ E+ G+VY L KL F +++ ++Y H
Sbjct: 72 ILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSK-FDEQRTATYITELANALSYCHSKR 130
Query: 411 IIHRDLKAANLLM 423
+IHRD+K NLL+
Sbjct: 131 VIHRDIKPENLLL 143
>pdb|3HYH|A Chain A, Crystal Structure Of The Protein Kinase Domain Of Yeast
Amp-Activated Protein Kinase Snf1
pdb|3HYH|B Chain B, Crystal Structure Of The Protein Kinase Domain Of Yeast
Amp-Activated Protein Kinase Snf1
Length = 275
Score = 56.2 bits (134), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 35/130 (26%), Positives = 67/130 (51%), Gaps = 5/130 (3%)
Query: 300 VASGSYGD--LYRGTYCSQDVAIKVLKPERI-NSDMQKEFAQEVFIMRKVRHKNVVQFIG 356
+ GS+G L T Q VA+K++ + + SDMQ +E+ +R +RH ++++
Sbjct: 21 LGEGSFGKVKLAYHTTTGQKVALKIINKKVLAKSDMQGRIEREISYLRLLRHPHIIKLYD 80
Query: 357 ACTKPPSLCIVTEFMSGGSVYDYLHKLKGVFKLPSLLKVAIDVSKGMNYLHQNNIIHRDL 416
+ +V E+ +G ++DY+ + + + + + Y H++ I+HRDL
Sbjct: 81 VIKSKDEIIMVIEY-AGNELFDYIVQ-RDKMSEQEARRFFQQIISAVEYCHRHKIVHRDL 138
Query: 417 KAANLLMDEN 426
K NLL+DE+
Sbjct: 139 KPENLLLDEH 148
>pdb|4AAA|A Chain A, Crystal Structure Of The Human Cdkl2 Kinase Domain
pdb|4BBM|A Chain A, Crystal Structure Of The Human Cdkl2 Kinase Domain With
Bound Tcs 2312
pdb|4BBM|B Chain B, Crystal Structure Of The Human Cdkl2 Kinase Domain With
Bound Tcs 2312
Length = 331
Score = 56.2 bits (134), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 39/143 (27%), Positives = 70/143 (48%), Gaps = 6/143 (4%)
Query: 300 VASGSYGDLY--RGTYCSQDVAIKVLKPERINSDMQKEFAQEVFIMRKVRHKNVVQFIGA 357
V GSYG + R + VAIK + ++K +E+ +++++RH+N+V +
Sbjct: 33 VGEGSYGMVMKCRNKDTGRIVAIKKFLESDDDKMVKKIAMREIKLLKQLRHENLVNLLEV 92
Query: 358 CTKPPSLCIVTEFMSGGSVYDYLHKLKGVFKLPSLLKVAIDVSKGMNYLHQNNIIHRDLK 417
C K +V EF+ ++ D L + K + G+ + H +NIIHRD+K
Sbjct: 93 CKKKKRWYLVFEFVDH-TILDDLELFPNGLDYQVVQKYLFQIINGIGFCHSHNIIHRDIK 151
Query: 418 AANLLMDENEVSLLLSLCLFTVS 440
N+L+ ++ V + LC F +
Sbjct: 152 PENILVSQSGV---VKLCDFGFA 171
>pdb|3QBN|A Chain A, Structure Of Human Aurora A In Complex With A
Diaminopyrimidine
Length = 281
Score = 56.2 bits (134), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 35/133 (26%), Positives = 65/133 (48%), Gaps = 4/133 (3%)
Query: 294 LKFGSKVASGSYGDLY--RGTYCSQDVAIKVL-KPERINSDMQKEFAQEVFIMRKVRHKN 350
+ G + G +G++Y R +A+KVL K + + ++ + +EV I +RH N
Sbjct: 11 FEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPN 70
Query: 351 VVQFIGACTKPPSLCIVTEFMSGGSVYDYLHKLKGVFKLPSLLKVAIDVSKGMNYLHQNN 410
+++ G + ++ E+ G+VY L KL F +++ ++Y H
Sbjct: 71 ILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSK-FDEQRTATYITELANALSYCHSKR 129
Query: 411 IIHRDLKAANLLM 423
+IHRD+K NLL+
Sbjct: 130 VIHRDIKPENLLL 142
>pdb|2W1D|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1E|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1F|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 275
Score = 56.2 bits (134), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 35/133 (26%), Positives = 65/133 (48%), Gaps = 4/133 (3%)
Query: 294 LKFGSKVASGSYGDLY--RGTYCSQDVAIKVL-KPERINSDMQKEFAQEVFIMRKVRHKN 350
+ G + G +G++Y R +A+KVL K + + ++ + +EV I +RH N
Sbjct: 13 FEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPN 72
Query: 351 VVQFIGACTKPPSLCIVTEFMSGGSVYDYLHKLKGVFKLPSLLKVAIDVSKGMNYLHQNN 410
+++ G + ++ E+ G+VY L KL F +++ ++Y H
Sbjct: 73 ILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSK-FDEQRTATYITELANALSYCHSKR 131
Query: 411 IIHRDLKAANLLM 423
+IHRD+K NLL+
Sbjct: 132 VIHRDIKPENLLL 144
>pdb|2WTW|A Chain A, Aurora-A Inhibitor Structure (2nd Crystal Form)
Length = 285
Score = 56.2 bits (134), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 35/133 (26%), Positives = 64/133 (48%), Gaps = 4/133 (3%)
Query: 294 LKFGSKVASGSYGDLY--RGTYCSQDVAIKVL-KPERINSDMQKEFAQEVFIMRKVRHKN 350
+ G + G +G++Y R +A+KVL K + + ++ + +EV I +RH N
Sbjct: 15 FEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPN 74
Query: 351 VVQFIGACTKPPSLCIVTEFMSGGSVYDYLHKLKGVFKLPSLLKVAIDVSKGMNYLHQNN 410
+++ G + ++ E+ G VY L KL F +++ ++Y H
Sbjct: 75 ILRLYGYFHDATRVYLILEYAPRGEVYKELQKLSK-FDEQRTATYITELANALSYCHSKR 133
Query: 411 IIHRDLKAANLLM 423
+IHRD+K NLL+
Sbjct: 134 VIHRDIKPENLLL 146
>pdb|2W1C|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1G|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 275
Score = 56.2 bits (134), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 35/133 (26%), Positives = 65/133 (48%), Gaps = 4/133 (3%)
Query: 294 LKFGSKVASGSYGDLY--RGTYCSQDVAIKVL-KPERINSDMQKEFAQEVFIMRKVRHKN 350
+ G + G +G++Y R +A+KVL K + + ++ + +EV I +RH N
Sbjct: 13 FEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPN 72
Query: 351 VVQFIGACTKPPSLCIVTEFMSGGSVYDYLHKLKGVFKLPSLLKVAIDVSKGMNYLHQNN 410
+++ G + ++ E+ G+VY L KL F +++ ++Y H
Sbjct: 73 ILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSK-FDEQRTATYITELANALSYCHSKR 131
Query: 411 IIHRDLKAANLLM 423
+IHRD+K NLL+
Sbjct: 132 VIHRDIKPENLLL 144
>pdb|3H0Y|A Chain A, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|A Chain A, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|B Chain B, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|C Chain C, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H10|A Chain A, Aurora A Inhibitor Complex
pdb|3H10|B Chain B, Aurora A Inhibitor Complex
pdb|3H10|D Chain D, Aurora A Inhibitor Complex
pdb|3P9J|A Chain A, Aurora A Kinase Domain With Phthalazinone Pyrazole
Inhibitor
Length = 268
Score = 56.2 bits (134), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 35/133 (26%), Positives = 65/133 (48%), Gaps = 4/133 (3%)
Query: 294 LKFGSKVASGSYGDLY--RGTYCSQDVAIKVL-KPERINSDMQKEFAQEVFIMRKVRHKN 350
+ G + G +G++Y R +A+KVL K + + ++ + +EV I +RH N
Sbjct: 10 FEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPN 69
Query: 351 VVQFIGACTKPPSLCIVTEFMSGGSVYDYLHKLKGVFKLPSLLKVAIDVSKGMNYLHQNN 410
+++ G + ++ E+ G+VY L KL F +++ ++Y H
Sbjct: 70 ILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSK-FDEQRTATYITELANALSYCHSKR 128
Query: 411 IIHRDLKAANLLM 423
+IHRD+K NLL+
Sbjct: 129 VIHRDIKPENLLL 141
>pdb|1OL6|A Chain A, Structure Of Unphosphorylated D274n Mutant Of Aurora-a
Length = 282
Score = 56.2 bits (134), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 35/133 (26%), Positives = 65/133 (48%), Gaps = 4/133 (3%)
Query: 294 LKFGSKVASGSYGDLY--RGTYCSQDVAIKVL-KPERINSDMQKEFAQEVFIMRKVRHKN 350
+ G + G +G++Y R +A+KVL K + + ++ + +EV I +RH N
Sbjct: 12 FEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPN 71
Query: 351 VVQFIGACTKPPSLCIVTEFMSGGSVYDYLHKLKGVFKLPSLLKVAIDVSKGMNYLHQNN 410
+++ G + ++ E+ G+VY L KL F +++ ++Y H
Sbjct: 72 ILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSK-FDEQRTATYITELANALSYCHSKR 130
Query: 411 IIHRDLKAANLLM 423
+IHRD+K NLL+
Sbjct: 131 VIHRDIKPENLLL 143
>pdb|3UNZ|A Chain A, Aurora A In Complex With Rpm1679
pdb|3UNZ|B Chain B, Aurora A In Complex With Rpm1679
pdb|3UO4|A Chain A, Aurora A In Complex With Rpm1680
pdb|3UO5|A Chain A, Aurora A In Complex With Yl1-038-31
pdb|3UO6|A Chain A, Aurora A In Complex With Yl5-083
pdb|3UO6|B Chain B, Aurora A In Complex With Yl5-083
pdb|3UOD|A Chain A, Aurora A In Complex With Rpm1693
pdb|3UOH|A Chain A, Aurora A In Complex With Rpm1722
pdb|3UOH|B Chain B, Aurora A In Complex With Rpm1722
pdb|3UOJ|A Chain A, Aurora A In Complex With Rpm1715
pdb|3UOJ|B Chain B, Aurora A In Complex With Rpm1715
pdb|3UOK|A Chain A, Aurora A In Complex With Yl5-81-1
pdb|3UOK|B Chain B, Aurora A In Complex With Yl5-81-1
pdb|3UOL|A Chain A, Aurora A In Complex With So2-162
pdb|3UOL|B Chain B, Aurora A In Complex With So2-162
pdb|3UP2|A Chain A, Aurora A In Complex With Rpm1686
pdb|3UP7|A Chain A, Aurora A In Complex With Yl1-038-09
pdb|4DEA|A Chain A, Aurora A In Complex With Yl1-038-18
pdb|4DEB|A Chain A, Aurora A In Complex With Rk2-17-01
pdb|4DED|A Chain A, Aurora A In Complex With Yl1-038-21
pdb|4DEE|A Chain A, Aurora A In Complex With Adp
Length = 279
Score = 56.2 bits (134), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 35/133 (26%), Positives = 65/133 (48%), Gaps = 4/133 (3%)
Query: 294 LKFGSKVASGSYGDLY--RGTYCSQDVAIKVL-KPERINSDMQKEFAQEVFIMRKVRHKN 350
+ G + G +G++Y R +A+KVL K + + ++ + +EV I +RH N
Sbjct: 11 FEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPN 70
Query: 351 VVQFIGACTKPPSLCIVTEFMSGGSVYDYLHKLKGVFKLPSLLKVAIDVSKGMNYLHQNN 410
+++ G + ++ E+ G+VY L KL F +++ ++Y H
Sbjct: 71 ILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSK-FDEQRTATYITELANALSYCHSKR 129
Query: 411 IIHRDLKAANLLM 423
+IHRD+K NLL+
Sbjct: 130 VIHRDIKPENLLL 142
>pdb|3FDN|A Chain A, Structure-Based Drug Design Of Novel Aurora Kinase A
Inhibitors: Structure Basis For Potency And Specificity
pdb|3K5U|A Chain A, Identification, Sar Studies And X-Ray Cocrystal Analysis
Of A Novel Furano-Pyrimidine Aurora Kinase A Inhibitor
pdb|3M11|A Chain A, Crystal Structure Of Aurora A Kinase Complexed With
Inhibitor
Length = 279
Score = 56.2 bits (134), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 35/133 (26%), Positives = 65/133 (48%), Gaps = 4/133 (3%)
Query: 294 LKFGSKVASGSYGDLY--RGTYCSQDVAIKVL-KPERINSDMQKEFAQEVFIMRKVRHKN 350
+ G + G +G++Y R +A+KVL K + + ++ + +EV I +RH N
Sbjct: 11 FEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPN 70
Query: 351 VVQFIGACTKPPSLCIVTEFMSGGSVYDYLHKLKGVFKLPSLLKVAIDVSKGMNYLHQNN 410
+++ G + ++ E+ G+VY L KL F +++ ++Y H
Sbjct: 71 ILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSK-FDEQRTATYITELANALSYCHSKR 129
Query: 411 IIHRDLKAANLLM 423
+IHRD+K NLL+
Sbjct: 130 VIHRDIKPENLLL 142
>pdb|2XNG|A Chain A, Structure Of Aurora-A Bound To A Selective Imidazopyrazine
Inhibitor
Length = 283
Score = 56.2 bits (134), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 35/133 (26%), Positives = 65/133 (48%), Gaps = 4/133 (3%)
Query: 294 LKFGSKVASGSYGDLY--RGTYCSQDVAIKVL-KPERINSDMQKEFAQEVFIMRKVRHKN 350
+ G + G +G++Y R +A+KVL K + + ++ + +EV I +RH N
Sbjct: 13 FEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPN 72
Query: 351 VVQFIGACTKPPSLCIVTEFMSGGSVYDYLHKLKGVFKLPSLLKVAIDVSKGMNYLHQNN 410
+++ G + ++ E+ G+VY L KL F +++ ++Y H
Sbjct: 73 ILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSK-FDEQRTATYITELANALSYCHSKR 131
Query: 411 IIHRDLKAANLLM 423
+IHRD+K NLL+
Sbjct: 132 VIHRDIKPENLLL 144
>pdb|1MQ4|A Chain A, Crystal Structure Of Aurora-A Protein Kinase
pdb|2NP8|A Chain A, Structural Basis For The Inhibition Of Aurora A Kinase By
A Novel Class Of High Affinity Disubstituted Pyrimidine
Inhibitors
pdb|2X81|A Chain A, Structure Of Aurora A In Complex With Mln8054
pdb|3MYG|A Chain A, Aurora A Kinase Complexed With Sch 1473759
pdb|3VAP|A Chain A, Synthesis And Sar Studies Of Imidazo-[1,2-A]-Pyrazine
Aurora Kinase Inhibitors With Improved Off Target Kinase
Selectivity
Length = 272
Score = 56.2 bits (134), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 35/133 (26%), Positives = 65/133 (48%), Gaps = 4/133 (3%)
Query: 294 LKFGSKVASGSYGDLY--RGTYCSQDVAIKVL-KPERINSDMQKEFAQEVFIMRKVRHKN 350
+ G + G +G++Y R +A+KVL K + + ++ + +EV I +RH N
Sbjct: 14 FEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPN 73
Query: 351 VVQFIGACTKPPSLCIVTEFMSGGSVYDYLHKLKGVFKLPSLLKVAIDVSKGMNYLHQNN 410
+++ G + ++ E+ G+VY L KL F +++ ++Y H
Sbjct: 74 ILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSK-FDEQRTATYITELANALSYCHSKR 132
Query: 411 IIHRDLKAANLLM 423
+IHRD+K NLL+
Sbjct: 133 VIHRDIKPENLLL 145
>pdb|2C6E|A Chain A, Aurora A Kinase Activated Mutant (T287d) In Complex With A
5-Aminopyrimidinyl Quinazoline Inhibitor
pdb|2C6E|B Chain B, Aurora A Kinase Activated Mutant (T287d) In Complex With A
5-Aminopyrimidinyl Quinazoline Inhibitor
Length = 283
Score = 56.2 bits (134), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 35/133 (26%), Positives = 65/133 (48%), Gaps = 4/133 (3%)
Query: 294 LKFGSKVASGSYGDLY--RGTYCSQDVAIKVL-KPERINSDMQKEFAQEVFIMRKVRHKN 350
+ G + G +G++Y R +A+KVL K + + ++ + +EV I +RH N
Sbjct: 15 FEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPN 74
Query: 351 VVQFIGACTKPPSLCIVTEFMSGGSVYDYLHKLKGVFKLPSLLKVAIDVSKGMNYLHQNN 410
+++ G + ++ E+ G+VY L KL F +++ ++Y H
Sbjct: 75 ILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSK-FDEQRTATYITELANALSYCHSKR 133
Query: 411 IIHRDLKAANLLM 423
+IHRD+K NLL+
Sbjct: 134 VIHRDIKPENLLL 146
>pdb|2JC6|A Chain A, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase 1d
pdb|2JC6|C Chain C, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase 1d
Length = 334
Score = 55.8 bits (133), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 35/133 (26%), Positives = 66/133 (49%), Gaps = 4/133 (3%)
Query: 292 KHLKFGSKVASGSYGD--LYRGTYCSQDVAIKVLKPERINSDMQKEFAQEVFIMRKVRHK 349
K +F + +G++ + L + A+K + P++ + E+ ++RK++H+
Sbjct: 22 KIFEFKETLGTGAFSEVVLAEEKATGKLFAVKCI-PKKALKGKESSIENEIAVLRKIKHE 80
Query: 350 NVVQFIGACTKPPSLCIVTEFMSGGSVYDYLHKLKGVFKLPSLLKVAIDVSKGMNYLHQN 409
N+V P L +V + +SGG ++D + + KG + + V + YLH+
Sbjct: 81 NIVALEDIYESPNHLYLVMQLVSGGELFDRIVE-KGFYTEKDASTLIRQVLDAVYYLHRM 139
Query: 410 NIIHRDLKAANLL 422
I+HRDLK NLL
Sbjct: 140 GIVHRDLKPENLL 152
>pdb|2X6D|A Chain A, Aurora-A Bound To An Inhibitor
pdb|2X6E|A Chain A, Aurora-A Bound To An Inhibitor
Length = 285
Score = 55.8 bits (133), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 35/133 (26%), Positives = 65/133 (48%), Gaps = 4/133 (3%)
Query: 294 LKFGSKVASGSYGDLY--RGTYCSQDVAIKVL-KPERINSDMQKEFAQEVFIMRKVRHKN 350
+ G + G +G++Y R +A+KVL K + + ++ + +EV I +RH N
Sbjct: 15 FEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPN 74
Query: 351 VVQFIGACTKPPSLCIVTEFMSGGSVYDYLHKLKGVFKLPSLLKVAIDVSKGMNYLHQNN 410
+++ G + ++ E+ G+VY L KL F +++ ++Y H
Sbjct: 75 ILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSK-FDEQRTATYITELANALSYCHSKR 133
Query: 411 IIHRDLKAANLLM 423
+IHRD+K NLL+
Sbjct: 134 VIHRDIKPENLLL 146
>pdb|3Q4Z|A Chain A, Structure Of Unphosphorylated Pak1 Kinase Domain
pdb|3Q4Z|B Chain B, Structure Of Unphosphorylated Pak1 Kinase Domain
Length = 306
Score = 55.8 bits (133), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 36/139 (25%), Positives = 73/139 (52%), Gaps = 11/139 (7%)
Query: 290 DPK--HLKFGSKVASGSYGDLYRG--TYCSQDVAIKVLKPERINSDMQKEFA-QEVFIMR 344
DPK + +F K+ G+ G +Y Q+VAI+ + + +KE E+ +MR
Sbjct: 18 DPKKKYTRF-EKIGQGASGTVYTAMDVATGQEVAIRQMN---LQQQPKKELIINEILVMR 73
Query: 345 KVRHKNVVQFIGACTKPPSLCIVTEFMSGGSVYDYLHKLKGVFKLPSLLKVAIDVSKGMN 404
+ ++ N+V ++ + L +V E+++GGS+ D + + + V + + +
Sbjct: 74 ENKNPNIVNYLDSYLVGDELWVVMEYLAGGSLTDVVTET--CMDEGQIAAVCRECLQALE 131
Query: 405 YLHQNNIIHRDLKAANLLM 423
+LH N +IHR++K+ N+L+
Sbjct: 132 FLHSNQVIHRNIKSDNILL 150
>pdb|2R5T|A Chain A, Crystal Structure Of Inactive Serum And Glucocorticoid-
Regulated Kinase 1 In Complex With Amp-Pnp
pdb|3HDM|A Chain A, Crystal Structure Of Serum And Glucocorticoid-Regulated
Kinase 1 In Complex With Compound 1
pdb|3HDN|A Chain A, Crystal Structure Of Serum And Glucocorticoid-Regulated
Kinase 1 In Complex With Compound 2
Length = 373
Score = 55.8 bits (133), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 40/166 (24%), Positives = 80/166 (48%), Gaps = 12/166 (7%)
Query: 291 PKHLKFGSKVASGSYGDLYRGTYCSQDV--AIKVLKPERINSDMQKE--FAQEVFIMRKV 346
P F + GS+G + + +++V A+KVL+ + I +++ ++ +++ V
Sbjct: 37 PSDFHFLKVIGKGSFGKVLLARHKAEEVFYAVKVLQKKAILKKKEEKHIMSERNVLLKNV 96
Query: 347 RHKNVVQFIGACTKPPSLCIVTEFMSGGSVYDYLHKLKGVFKLPSLLKVAIDVSKGMNYL 406
+H +V + L V ++++GG ++ +L + + F P A +++ + YL
Sbjct: 97 KHPFLVGLHFSFQTADKLYFVLDYINGGELFYHLQRER-CFLEPRARFYAAEIASALGYL 155
Query: 407 HQNNIIHRDLKAANLLMDENEVSLLLSLCLFTVSI-------LFCG 445
H NI++RDLK N+L+D +L L +I FCG
Sbjct: 156 HSLNIVYRDLKPENILLDSQGHIVLTDFGLCKENIEHNSTTSTFCG 201
>pdb|2JAM|A Chain A, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase I G
pdb|2JAM|B Chain B, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase I G
Length = 304
Score = 55.8 bits (133), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 37/135 (27%), Positives = 69/135 (51%), Gaps = 9/135 (6%)
Query: 292 KHLKFGSKVASGSYGDLY--RGTYCSQDVAIKVLK--PERINSDMQKEFAQEVFIMRKVR 347
K F + SG++ +++ + + A+K +K P +S ++ E A +++K++
Sbjct: 9 KTFIFMEVLGSGAFSEVFLVKQRLTGKLFALKCIKKSPAFRDSSLENEIA----VLKKIK 64
Query: 348 HKNVVQFIGACTKPPSLCIVTEFMSGGSVYDYLHKLKGVFKLPSLLKVAIDVSKGMNYLH 407
H+N+V +V + +SGG ++D + + +GV+ V V + YLH
Sbjct: 65 HENIVTLEDIYESTTHYYLVMQLVSGGELFDRILE-RGVYTEKDASLVIQQVLSAVKYLH 123
Query: 408 QNNIIHRDLKAANLL 422
+N I+HRDLK NLL
Sbjct: 124 ENGIVHRDLKPENLL 138
>pdb|1ZYS|A Chain A, Co-Crystal Structure Of Checkpoint Kinase Chk1 With A
Pyrrolo-Pyridine Inhibitor
Length = 273
Score = 55.8 bits (133), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 43/152 (28%), Positives = 75/152 (49%), Gaps = 7/152 (4%)
Query: 300 VASGSYGD--LYRGTYCSQDVAIKVLKPERINSDMQKEFAQEVFIMRKVRHKNVVQFIGA 357
+ G+YG+ L + VA+K++ +R D + +E+ I + H+NVV+F G
Sbjct: 15 LGEGAYGEVQLAVNRVTEEAVAVKIVDMKRA-VDCPENIKKEICINAMLNHENVVKFYGH 73
Query: 358 CTKPPSLCIVTEFMSGGSVYDYLHKLKGVFKLPSLLKVAIDVSKGMNYLHQNNIIHRDLK 417
+ + E+ SGG ++D + G+ + P + + G+ YLH I HRD+K
Sbjct: 74 RREGNIQYLFLEYCSGGELFDRIEPDIGMPE-PDAQRFFHQLMAGVVYLHGIGITHRDIK 132
Query: 418 AANLLMDENEVSLLLSLCLFTVSILFCGKGRE 449
NLL+DE + L + F ++ +F RE
Sbjct: 133 PENLLLDERDN---LKISDFGLATVFRYNNRE 161
>pdb|3COH|A Chain A, Crystal Structure Of Aurora-A In Complex With A
Pentacyclic Inhibitor
pdb|3COH|B Chain B, Crystal Structure Of Aurora-A In Complex With A
Pentacyclic Inhibitor
Length = 268
Score = 55.5 bits (132), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 35/133 (26%), Positives = 65/133 (48%), Gaps = 4/133 (3%)
Query: 294 LKFGSKVASGSYGDLY--RGTYCSQDVAIKVL-KPERINSDMQKEFAQEVFIMRKVRHKN 350
+ G + G +G++Y R +A+KVL K + + ++ + +EV I +RH N
Sbjct: 10 FEIGRPLGKGKFGNVYLAREKNSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPN 69
Query: 351 VVQFIGACTKPPSLCIVTEFMSGGSVYDYLHKLKGVFKLPSLLKVAIDVSKGMNYLHQNN 410
+++ G + ++ E+ G+VY L KL F +++ ++Y H
Sbjct: 70 ILRLYGYFHDSTRVYLILEYAPLGTVYRELQKLSK-FDEQRTATYITELANALSYCHSKK 128
Query: 411 IIHRDLKAANLLM 423
+IHRD+K NLL+
Sbjct: 129 VIHRDIKPENLLL 141
>pdb|2WQE|A Chain A, Structure Of S155r Aurora-A Somatic Mutant
Length = 262
Score = 55.5 bits (132), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 34/133 (25%), Positives = 65/133 (48%), Gaps = 4/133 (3%)
Query: 294 LKFGSKVASGSYGDLYRGTYCSQD--VAIKVL-KPERINSDMQKEFAQEVFIMRKVRHKN 350
+ G + G +G++Y + +A+KVL K + + ++ + +EV I +RH N
Sbjct: 7 FEIGRPLGKGKFGNVYLAREKQRKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPN 66
Query: 351 VVQFIGACTKPPSLCIVTEFMSGGSVYDYLHKLKGVFKLPSLLKVAIDVSKGMNYLHQNN 410
+++ G + ++ E+ G+VY L KL F +++ ++Y H
Sbjct: 67 ILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSK-FDEQRTATYITELANALSYCHSKR 125
Query: 411 IIHRDLKAANLLM 423
+IHRD+K NLL+
Sbjct: 126 VIHRDIKPENLLL 138
>pdb|3ETA|A Chain A, Kinase Domain Of Insulin Receptor Complexed With A Pyrrolo
Pyridine Inhibitor
pdb|3ETA|B Chain B, Kinase Domain Of Insulin Receptor Complexed With A Pyrrolo
Pyridine Inhibitor
Length = 317
Score = 55.5 bits (132), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 43/179 (24%), Positives = 79/179 (44%), Gaps = 27/179 (15%)
Query: 288 EIDPKHLKFGSKVASGSYGDLYRGTY-------CSQDVAIKVLKPERINSDMQKEFAQEV 340
E+ + + ++ GS+G +Y G VA+K + E + + EF E
Sbjct: 12 EVSREKITLLRELGQGSFGMVYEGNARDIIKGEAETRVAVKTVN-ESASLRERIEFLNEA 70
Query: 341 FIMRKVRHKNVVQFIGACTKPPSLCIVTEFMSGGSVYDYLHKLKGVFK---------LPS 391
+M+ +VV+ +G +K +V E M+ G + YL L+ + L
Sbjct: 71 SVMKGFTCHHVVRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQE 130
Query: 392 LLKVAIDVSKGMNYLHQNNIIHRDLKAANLLMDENEVSLLLSLCLFTVSILFCGKGREL 450
++++A +++ GM YL+ +HRDL A N ++ + FTV I G R++
Sbjct: 131 MIQMAAEIADGMAYLNAKKFVHRDLAARNCMVAHD----------FTVKIGDFGMTRDI 179
>pdb|2Q0N|A Chain A, Structure Of Human P21 Activating Kinase 4 (Pak4) In
Complex With A Consensus Peptide
Length = 301
Score = 55.1 bits (131), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 43/165 (26%), Positives = 76/165 (46%), Gaps = 8/165 (4%)
Query: 260 SPTSEPEDTGMKSHPYHLKIPNDGTDVWEIDPK-HLKFGSKVASGSYGDLYRGTYCSQDV 318
SP EP+ + L++ D D P+ +L K+ GS G + T S
Sbjct: 1 SPQREPQRVSHEQFRAALQLVVDPGD-----PRSYLDNFIKIGEGSTGIVCIATVRSSGK 55
Query: 319 AIKVLKPERINSDMQKEFAQEVFIMRKVRHKNVVQFIGACTKPPSLCIVTEFMSGGSVYD 378
+ V K + ++ EV IMR +H+NVV+ + L +V EF+ GG++ D
Sbjct: 56 LVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSYLVGDELWVVMEFLEGGALTD 115
Query: 379 YLHKLKGVFKLPSLLKVAIDVSKGMNYLHQNNIIHRDLKAANLLM 423
+ + + V + V + ++ LH +IHRD+K+ ++L+
Sbjct: 116 IVTHTR--MNEEQIAAVCLAVLQALSVLHAQGVIHRDIKSDSILL 158
>pdb|3ORM|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain D76a Mutant
Length = 311
Score = 55.1 bits (131), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 45/158 (28%), Positives = 76/158 (48%), Gaps = 21/158 (13%)
Query: 276 HLKIPNDGTDVWEIDPKHLKFGSKVASGSYGDLYRGTYCSQDVAIKVLKPERINSDMQKE 335
H+ P+ +D +E+ + L FG S L R +DVA+KVL+ +D+ ++
Sbjct: 3 HMTTPSHLSDRYELG-EILGFGGM----SEVHLARDLRLHRDVAVKVLR-----ADLARD 52
Query: 336 ------FAQEVFIMRKVRHKNVVQF--IGACTKP--PSLCIVTEFMSGGSVYDYLHKLKG 385
F +E + H +V G P P IV E++ G ++ D +H +G
Sbjct: 53 PSFYLRFRREAQNAAALNHPAIVAVYATGEAETPAGPLPYIVMEYVDGVTLRDIVHT-EG 111
Query: 386 VFKLPSLLKVAIDVSKGMNYLHQNNIIHRDLKAANLLM 423
++V D + +N+ HQN IIHRD+K AN+++
Sbjct: 112 PMTPKRAIEVIADACQALNFSHQNGIIHRDVKPANIMI 149
>pdb|1MRU|A Chain A, Intracellular SerTHR PROTEIN KINASE DOMAIN OF
Mycobacterium Tuberculosis Pknb.
pdb|1MRU|B Chain B, Intracellular SerTHR PROTEIN KINASE DOMAIN OF
Mycobacterium Tuberculosis Pknb
Length = 311
Score = 55.1 bits (131), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 45/158 (28%), Positives = 76/158 (48%), Gaps = 21/158 (13%)
Query: 276 HLKIPNDGTDVWEIDPKHLKFGSKVASGSYGDLYRGTYCSQDVAIKVLKPERINSDMQKE 335
H+ P+ +D +E+ + L FG S L R +DVA+KVL+ +D+ ++
Sbjct: 3 HMTTPSHLSDRYELG-EILGFGGM----SEVHLARDLRLHRDVAVKVLR-----ADLARD 52
Query: 336 ------FAQEVFIMRKVRHKNVVQF--IGACTKP--PSLCIVTEFMSGGSVYDYLHKLKG 385
F +E + H +V G P P IV E++ G ++ D +H +G
Sbjct: 53 PSFYLRFRREAQNAAALNHPAIVAVYDTGEAETPAGPLPYIVMEYVDGVTLRDIVHT-EG 111
Query: 386 VFKLPSLLKVAIDVSKGMNYLHQNNIIHRDLKAANLLM 423
++V D + +N+ HQN IIHRD+K AN+++
Sbjct: 112 PMTPKRAIEVIADACQALNFSHQNGIIHRDVKPANIMI 149
>pdb|2C30|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 6
Length = 321
Score = 55.1 bits (131), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 36/128 (28%), Positives = 66/128 (51%), Gaps = 8/128 (6%)
Query: 299 KVASGSYGD--LYRGTYCSQDVAIKVLKPERINSDMQKEFA-QEVFIMRKVRHKNVVQFI 355
K+ GS G L R + + VA+K++ + ++E EV IMR +H NVV+
Sbjct: 52 KIGEGSTGIVCLAREKHSGRQVAVKMMD---LRKQQRRELLFNEVVIMRDYQHFNVVEMY 108
Query: 356 GACTKPPSLCIVTEFMSGGSVYDYLHKLKGVFKLPSLLKVAIDVSKGMNYLHQNNIIHRD 415
+ L ++ EF+ GG++ D + +++ + V V + + YLH +IHRD
Sbjct: 109 KSYLVGEELWVLMEFLQGGALTDIVSQVR--LNEEQIATVCEAVLQALAYLHAQGVIHRD 166
Query: 416 LKAANLLM 423
+K+ ++L+
Sbjct: 167 IKSDSILL 174
>pdb|2F57|A Chain A, Crystal Structure Of The Human P21-activated Kinase 5
pdb|2F57|B Chain B, Crystal Structure Of The Human P21-activated Kinase 5
Length = 317
Score = 55.1 bits (131), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 39/141 (27%), Positives = 69/141 (48%), Gaps = 9/141 (6%)
Query: 290 DPK-HLKFGSKVASGSYGDLYRGT--YCSQDVAIKVLKPERINSDMQKEFA-QEVFIMRK 345
DP+ +L K+ GS G + T + + VA+K + + ++E EV IMR
Sbjct: 42 DPREYLANFIKIGEGSTGIVCIATEKHTGKQVAVKKMD---LRKQQRRELLFNEVVIMRD 98
Query: 346 VRHKNVVQFIGACTKPPSLCIVTEFMSGGSVYDYLHKLKGVFKLPSLLKVAIDVSKGMNY 405
H NVV + L +V EF+ GG++ D + + + V + V + ++Y
Sbjct: 99 YHHDNVVDMYSSYLVGDELWVVMEFLEGGALTDIVTHTR--MNEEQIATVCLSVLRALSY 156
Query: 406 LHQNNIIHRDLKAANLLMDEN 426
LH +IHRD+K+ ++L+ +
Sbjct: 157 LHNQGVIHRDIKSDSILLTSD 177
>pdb|3F69|A Chain A, Crystal Structure Of The Mycobacterium Tuberculosis Pknb
Mutant Kinase Domain In Complex With Kt5720
pdb|3F69|B Chain B, Crystal Structure Of The Mycobacterium Tuberculosis Pknb
Mutant Kinase Domain In Complex With Kt5720
Length = 311
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 46/158 (29%), Positives = 76/158 (48%), Gaps = 21/158 (13%)
Query: 276 HLKIPNDGTDVWEIDPKHLKFGSKVASGSYGDLYRGTYCSQDVAIKVLKPERINSDMQKE 335
H+ P+ +D +E+ + L FG S L R +DVA+KVL+ +D+ ++
Sbjct: 3 HMTTPSHLSDRYELG-EILGFGGM----SEVHLARDLRDHRDVAVKVLR-----ADLARD 52
Query: 336 ------FAQEVFIMRKVRHKNVVQF--IGACTKP--PSLCIVTEFMSGGSVYDYLHKLKG 385
F +E + H +V G P P IV E++ G ++ D +H +G
Sbjct: 53 PSFYLRFRREAQNAAALNHPAIVAVYDTGEAETPAGPLPYIVMEYVDGVTLRDIVHT-EG 111
Query: 386 VFKLPSLLKVAIDVSKGMNYLHQNNIIHRDLKAANLLM 423
++V D + +N+ HQN IIHRD+K AN+L+
Sbjct: 112 PMTPKRAIEVIADACQALNFSHQNGIIHRDVKPANILI 149
>pdb|4EUT|A Chain A, Structure Of Bx-795 Complexed With Unphosphorylated Human
Tbk1 Kinase- Uld Domain
pdb|4EUT|B Chain B, Structure Of Bx-795 Complexed With Unphosphorylated Human
Tbk1 Kinase- Uld Domain
Length = 396
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 41/135 (30%), Positives = 68/135 (50%), Gaps = 19/135 (14%)
Query: 300 VASGSYGDLYRGTYCSQD--VAIKV------LKPERINSDMQKEFAQEVFIMRKVRHKNV 351
+ G+ +++RG + AIKV L+P D+Q +E +++K+ HKN+
Sbjct: 17 LGQGATANVFRGRHKKTGDLFAIKVFNNISFLRP----VDVQ---MREFEVLKKLNHKNI 69
Query: 352 VQF--IGACTKPPSLCIVTEFMSGGSVYDYLHKLKGVFKLPS--LLKVAIDVSKGMNYLH 407
V+ I T ++ EF GS+Y L + + LP L V DV GMN+L
Sbjct: 70 VKLFAIEEETTTRHKVLIMEFCPCGSLYTVLEEPSNAYGLPESEFLIVLRDVVGGMNHLR 129
Query: 408 QNNIIHRDLKAANLL 422
+N I+HR++K N++
Sbjct: 130 ENGIVHRNIKPGNIM 144
>pdb|1UA2|A Chain A, Crystal Structure Of Human Cdk7
pdb|1UA2|B Chain B, Crystal Structure Of Human Cdk7
pdb|1UA2|C Chain C, Crystal Structure Of Human Cdk7
pdb|1UA2|D Chain D, Crystal Structure Of Human Cdk7
Length = 346
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 38/135 (28%), Positives = 72/135 (53%), Gaps = 8/135 (5%)
Query: 300 VASGSYGDLY--RGTYCSQDVAIKVLK---PERINSDMQKEFAQEVFIMRKVRHKNVVQF 354
+ G + +Y R +Q VAIK +K + + +E+ +++++ H N++
Sbjct: 18 LGEGQFATVYKARDKNTNQIVAIKKIKLGHRSEAKDGINRTALREIKLLQELSHPNIIGL 77
Query: 355 IGACTKPPSLCIVTEFMSGGSVYDYLHKLKGVFKLPSLLKVAIDVS-KGMNYLHQNNIIH 413
+ A ++ +V +FM + + + K + PS +K + ++ +G+ YLHQ+ I+H
Sbjct: 78 LDAFGHKSNISLVFDFME--TDLEVIIKDNSLVLTPSHIKAYMLMTLQGLEYLHQHWILH 135
Query: 414 RDLKAANLLMDENEV 428
RDLK NLL+DEN V
Sbjct: 136 RDLKPNNLLLDENGV 150
>pdb|2BVA|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4
pdb|2BVA|B Chain B, Crystal Structure Of The Human P21-Activated Kinase 4
Length = 292
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 34/125 (27%), Positives = 61/125 (48%), Gaps = 2/125 (1%)
Query: 299 KVASGSYGDLYRGTYCSQDVAIKVLKPERINSDMQKEFAQEVFIMRKVRHKNVVQFIGAC 358
K+ GS G + T S + V K + ++ EV IMR +H+NVV+ +
Sbjct: 27 KIGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSY 86
Query: 359 TKPPSLCIVTEFMSGGSVYDYLHKLKGVFKLPSLLKVAIDVSKGMNYLHQNNIIHRDLKA 418
L +V EF+ GG++ D + + + V + V + ++ LH +IHRD+K+
Sbjct: 87 LVGDELWVVMEFLEGGALTDIVTHTR--MNEEQIAAVCLAVLQALSVLHAQGVIHRDIKS 144
Query: 419 ANLLM 423
++L+
Sbjct: 145 DSILL 149
>pdb|4EUU|A Chain A, Structure Of Bx-795 Complexed With Human Tbk1 Kinase
Domain Phosphorylated On Ser172
pdb|4EUU|B Chain B, Structure Of Bx-795 Complexed With Human Tbk1 Kinase
Domain Phosphorylated On Ser172
Length = 319
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 41/135 (30%), Positives = 68/135 (50%), Gaps = 19/135 (14%)
Query: 300 VASGSYGDLYRGTYCSQD--VAIKV------LKPERINSDMQKEFAQEVFIMRKVRHKNV 351
+ G+ +++RG + AIKV L+P D+Q +E +++K+ HKN+
Sbjct: 17 LGQGATANVFRGRHKKTGDLFAIKVFNNISFLRP----VDVQ---MREFEVLKKLNHKNI 69
Query: 352 VQF--IGACTKPPSLCIVTEFMSGGSVYDYLHKLKGVFKLPS--LLKVAIDVSKGMNYLH 407
V+ I T ++ EF GS+Y L + + LP L V DV GMN+L
Sbjct: 70 VKLFAIEEETTTRHKVLIMEFCPCGSLYTVLEEPSNAYGLPESEFLIVLRDVVGGMNHLR 129
Query: 408 QNNIIHRDLKAANLL 422
+N I+HR++K N++
Sbjct: 130 ENGIVHRNIKPGNIM 144
>pdb|4AGU|A Chain A, Crystal Structure Of The Human Cdkl1 Kinase Domain
pdb|4AGU|B Chain B, Crystal Structure Of The Human Cdkl1 Kinase Domain
pdb|4AGU|C Chain C, Crystal Structure Of The Human Cdkl1 Kinase Domain
Length = 311
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 43/158 (27%), Positives = 80/158 (50%), Gaps = 11/158 (6%)
Query: 292 KHLKFGSKVASGSYGDLY--RGTYCSQDVAIKVLKPERINSDMQKEFAQEVFIMRKVRHK 349
K+ K G K+ GSYG ++ R Q VAIK + ++K +E+ ++++++H
Sbjct: 4 KYEKIG-KIGEGSYGVVFKCRNRDTGQIVAIKKFLESEDDPVIKKIALREIRMLKQLKHP 62
Query: 350 NVVQFIGACTKPPSLCIVTEFMSGGSVYDYLHKLKGVFKLPSLLKVAI--DVSKGMNYLH 407
N+V + + L +V E+ +++ +GV P L +I + +N+ H
Sbjct: 63 NLVNLLEVFRRKRRLHLVFEYCDHTVLHELDRYQRGV---PEHLVKSITWQTLQAVNFCH 119
Query: 408 QNNIIHRDLKAANLLMDENEVSLLLSLCLFTVSILFCG 445
++N IHRD+K N+L+ ++ V + LC F + L G
Sbjct: 120 KHNCIHRDVKPENILITKHSV---IKLCDFGFARLLTG 154
>pdb|2X4Z|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With Pf-03758309
pdb|4APP|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With (S)-N-(5-(3-Benzyl-1-Methylpiperazine-4-
Carbonyl)-6,6-Dimethyl-1,4,5,6-Tetrahydropyrrolo(3,4-C)
Pyrazol-3-Yl)-3-Phenoxybenzamide
Length = 296
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 34/128 (26%), Positives = 62/128 (48%), Gaps = 2/128 (1%)
Query: 299 KVASGSYGDLYRGTYCSQDVAIKVLKPERINSDMQKEFAQEVFIMRKVRHKNVVQFIGAC 358
K+ GS G + T S + V K + ++ EV IMR +H+NVV+ +
Sbjct: 31 KIGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSY 90
Query: 359 TKPPSLCIVTEFMSGGSVYDYLHKLKGVFKLPSLLKVAIDVSKGMNYLHQNNIIHRDLKA 418
L +V EF+ GG++ D + + + V + V + ++ LH +IHRD+K+
Sbjct: 91 LVGDELWVVMEFLEGGALTDIVTHTR--MNEEQIAAVCLAVLQALSVLHAQGVIHRDIKS 148
Query: 419 ANLLMDEN 426
++L+ +
Sbjct: 149 DSILLTHD 156
>pdb|4FIE|A Chain A, Full-Length Human Pak4
pdb|4FIE|B Chain B, Full-Length Human Pak4
Length = 423
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 34/125 (27%), Positives = 61/125 (48%), Gaps = 2/125 (1%)
Query: 299 KVASGSYGDLYRGTYCSQDVAIKVLKPERINSDMQKEFAQEVFIMRKVRHKNVVQFIGAC 358
K+ GS G + T S + V K + ++ EV IMR +H+NVV+ +
Sbjct: 158 KIGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSY 217
Query: 359 TKPPSLCIVTEFMSGGSVYDYLHKLKGVFKLPSLLKVAIDVSKGMNYLHQNNIIHRDLKA 418
L +V EF+ GG++ D + + + V + V + ++ LH +IHRD+K+
Sbjct: 218 LVGDELWVVMEFLEGGALTDIVTHTR--MNEEQIAAVCLAVLQALSVLHAQGVIHRDIKS 275
Query: 419 ANLLM 423
++L+
Sbjct: 276 DSILL 280
>pdb|1O6Y|A Chain A, Catalytic Domain Of Pknb Kinase From Mycobacterium
Tuberculosis
pdb|2FUM|A Chain A, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|B Chain B, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|C Chain C, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|D Chain D, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
Length = 299
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 46/165 (27%), Positives = 78/165 (47%), Gaps = 21/165 (12%)
Query: 269 GMKSHPYHLKIPNDGTDVWEIDPKHLKFGSKVASGSYGDLYRGTYCSQDVAIKVLKPERI 328
G+ H+ P+ +D +E+ + L FG S L R +DVA+KVL+
Sbjct: 13 GLVPRGSHMTTPSHLSDRYELG-EILGFGGM----SEVHLARDLRLHRDVAVKVLR---- 63
Query: 329 NSDMQKE------FAQEVFIMRKVRHKNVVQF--IGACTKP--PSLCIVTEFMSGGSVYD 378
+D+ ++ F +E + H +V G P P IV E++ G ++ D
Sbjct: 64 -ADLARDPSFYLRFRREAQNAAALNHPAIVAVYDTGEAETPAGPLPYIVMEYVDGVTLRD 122
Query: 379 YLHKLKGVFKLPSLLKVAIDVSKGMNYLHQNNIIHRDLKAANLLM 423
+H +G ++V D + +N+ HQN IIHRD+K AN+++
Sbjct: 123 IVHT-EGPMTPKRAIEVIADACQALNFSHQNGIIHRDVKPANIMI 166
>pdb|4FIF|A Chain A, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIF|B Chain B, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIG|A Chain A, Catalytic Domain Of Human Pak4
pdb|4FIG|B Chain B, Catalytic Domain Of Human Pak4
pdb|4FIH|A Chain A, Catalytic Domain Of Human Pak4 With Qkftglprqw Peptide
pdb|4FII|A Chain A, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIJ|A Chain A, Catalytic Domain Of Human Pak4
Length = 346
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 43/165 (26%), Positives = 76/165 (46%), Gaps = 8/165 (4%)
Query: 260 SPTSEPEDTGMKSHPYHLKIPNDGTDVWEIDPK-HLKFGSKVASGSYGDLYRGTYCSQDV 318
SP EP+ + L++ D D P+ +L K+ GS G + T S
Sbjct: 46 SPQREPQRVSHEQFRAALQLVVDPGD-----PRSYLDNFIKIGEGSTGIVCIATVRSSGK 100
Query: 319 AIKVLKPERINSDMQKEFAQEVFIMRKVRHKNVVQFIGACTKPPSLCIVTEFMSGGSVYD 378
+ V K + ++ EV IMR +H+NVV+ + L +V EF+ GG++ D
Sbjct: 101 LVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSYLVGDELWVVMEFLEGGALTD 160
Query: 379 YLHKLKGVFKLPSLLKVAIDVSKGMNYLHQNNIIHRDLKAANLLM 423
+ + + V + V + ++ LH +IHRD+K+ ++L+
Sbjct: 161 IVTHTR--MNEEQIAAVCLAVLQALSVLHAQGVIHRDIKSDSILL 203
>pdb|4FSU|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 39/132 (29%), Positives = 68/132 (51%), Gaps = 5/132 (3%)
Query: 318 VAIKVLKPERINSDMQKEFAQEVFIMRKVRHKNVVQFIGACTKPPSLCIVTEFMSGGSVY 377
VA+K++ +R D + +E+ I + + H+NVV+F G + + E+ SGG ++
Sbjct: 34 VAVKIVDMKRA-VDCPENIKKEICINKMLNHENVVKFYGHRREGNIQYLFLEYCSGGELF 92
Query: 378 DYLHKLKGVFKLPSLLKVAIDVSKGMNYLHQNNIIHRDLKAANLLMDENEVSLLLSLCLF 437
D + G+ + P + + G+ YLH I HRD+K NLL+DE + L + F
Sbjct: 93 DRIEPDIGMPE-PDAQRFFHQLMAGVVYLHGIGITHRDIKPENLLLDERDN---LKISDF 148
Query: 438 TVSILFCGKGRE 449
++ +F RE
Sbjct: 149 GLATVFRYNNRE 160
>pdb|2A2A|A Chain A, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2A2A|B Chain B, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2A2A|C Chain C, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2A2A|D Chain D, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2CKE|A Chain A, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
pdb|2CKE|B Chain B, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
pdb|2CKE|C Chain C, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
pdb|2CKE|D Chain D, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
Length = 321
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 39/139 (28%), Positives = 70/139 (50%), Gaps = 12/139 (8%)
Query: 297 GSKVASGSYGDLY--RGTYCSQDVAIKVLKPERINSDMQ----KEFAQEVFIMRKVRHKN 350
G ++ SG + + R + A K +K + + + +E +EV I+R+V H N
Sbjct: 17 GEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIEREVSILRQVLHHN 76
Query: 351 VVQFIGACTKPPSLCIVTEFMSGGSVYDYLHKLKGVF--KLPSLLKVAIDVSKGMNYLHQ 408
V+ + ++ E +SGG ++D+L + + + + S +K +D G+NYLH
Sbjct: 77 VITLHDVYENRTDVVLILELVSGGELFDFLAQKESLSEEEATSFIKQILD---GVNYLHT 133
Query: 409 NNIIHRDLKAAN-LLMDEN 426
I H DLK N +L+D+N
Sbjct: 134 KKIAHFDLKPENIMLLDKN 152
>pdb|1WMK|A Chain A, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|E Chain E, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|C Chain C, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|B Chain B, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|F Chain F, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|D Chain D, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|H Chain H, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|G Chain G, Human Death-Associated Kinase Drp-1, Mutant S308d D40
Length = 321
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 39/139 (28%), Positives = 70/139 (50%), Gaps = 12/139 (8%)
Query: 297 GSKVASGSYGDLY--RGTYCSQDVAIKVLKPERINSDMQ----KEFAQEVFIMRKVRHKN 350
G ++ SG + + R + A K +K + + + +E +EV I+R+V H N
Sbjct: 17 GEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIEREVSILRQVLHHN 76
Query: 351 VVQFIGACTKPPSLCIVTEFMSGGSVYDYLHKLKGVF--KLPSLLKVAIDVSKGMNYLHQ 408
V+ + ++ E +SGG ++D+L + + + + S +K +D G+NYLH
Sbjct: 77 VITLHDVYENRTDVVLILELVSGGELFDFLAQKESLSEEEATSFIKQILD---GVNYLHT 133
Query: 409 NNIIHRDLKAAN-LLMDEN 426
I H DLK N +L+D+N
Sbjct: 134 KKIAHFDLKPENIMLLDKN 152
>pdb|3F61|A Chain A, Crystal Structure Of M. Tuberculosis Pknb
Leu33aspVAL222ASP DOUBLE MUTANT IN COMPLEX WITH ADP
Length = 311
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 45/158 (28%), Positives = 76/158 (48%), Gaps = 21/158 (13%)
Query: 276 HLKIPNDGTDVWEIDPKHLKFGSKVASGSYGDLYRGTYCSQDVAIKVLKPERINSDMQKE 335
H+ P+ +D +E+ + L FG S L R +DVA+KVL+ +D+ ++
Sbjct: 3 HMTTPSHLSDRYELG-EILGFGGM----SEVHLARDLRDHRDVAVKVLR-----ADLARD 52
Query: 336 ------FAQEVFIMRKVRHKNVVQF--IGACTKP--PSLCIVTEFMSGGSVYDYLHKLKG 385
F +E + H +V G P P IV E++ G ++ D +H +G
Sbjct: 53 PSFYLRFRREAQNAAALNHPAIVAVYDTGEAETPAGPLPYIVMEYVDGVTLRDIVHT-EG 111
Query: 386 VFKLPSLLKVAIDVSKGMNYLHQNNIIHRDLKAANLLM 423
++V D + +N+ HQN IIHRD+K AN+++
Sbjct: 112 PMTPKRAIEVIADACQALNFSHQNGIIHRDVKPANIMI 149
>pdb|3ORI|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|B Chain B, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|C Chain C, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|D Chain D, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORK|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 2)
pdb|3ORL|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 3)
pdb|3ORO|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 4)
pdb|3ORP|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 5)
pdb|3ORT|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 6)
Length = 311
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 45/158 (28%), Positives = 76/158 (48%), Gaps = 21/158 (13%)
Query: 276 HLKIPNDGTDVWEIDPKHLKFGSKVASGSYGDLYRGTYCSQDVAIKVLKPERINSDMQKE 335
H+ P+ +D +E+ + L FG S L R +DVA+KVL+ +D+ ++
Sbjct: 3 HMTTPSHLSDRYELG-EILGFGGM----SEVHLARDLRDHRDVAVKVLR-----ADLARD 52
Query: 336 ------FAQEVFIMRKVRHKNVVQF--IGACTKP--PSLCIVTEFMSGGSVYDYLHKLKG 385
F +E + H +V G P P IV E++ G ++ D +H +G
Sbjct: 53 PSFYLRFRREAQNAAALNHPAIVAVYDTGEAETPAGPLPYIVMEYVDGVTLRDIVHT-EG 111
Query: 386 VFKLPSLLKVAIDVSKGMNYLHQNNIIHRDLKAANLLM 423
++V D + +N+ HQN IIHRD+K AN+++
Sbjct: 112 PMTPKRAIEVIADACQALNFSHQNGIIHRDVKPANIMI 149
>pdb|1Z9X|A Chain A, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 3 Monomers In The Asymmetric Unit
pdb|1Z9X|B Chain B, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 3 Monomers In The Asymmetric Unit
pdb|1Z9X|C Chain C, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 3 Monomers In The Asymmetric Unit
Length = 321
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 39/139 (28%), Positives = 70/139 (50%), Gaps = 12/139 (8%)
Query: 297 GSKVASGSYGDLY--RGTYCSQDVAIKVLKPERINSDMQ----KEFAQEVFIMRKVRHKN 350
G ++ SG + + R + A K +K + + + +E +EV I+R+V H N
Sbjct: 17 GEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIEREVSILRQVLHHN 76
Query: 351 VVQFIGACTKPPSLCIVTEFMSGGSVYDYLHKLKGVF--KLPSLLKVAIDVSKGMNYLHQ 408
V+ + ++ E +SGG ++D+L + + + + S +K +D G+NYLH
Sbjct: 77 VITLHDVYENRTDVVLILELVSGGELFDFLAQKESLSEEEATSFIKQILD---GVNYLHT 133
Query: 409 NNIIHRDLKAAN-LLMDEN 426
I H DLK N +L+D+N
Sbjct: 134 KKIAHFDLKPENIMLLDKN 152
>pdb|1ZWS|A Chain A, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|B Chain B, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|C Chain C, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|D Chain D, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|E Chain E, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|F Chain F, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|G Chain G, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|H Chain H, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
Length = 288
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 39/139 (28%), Positives = 70/139 (50%), Gaps = 12/139 (8%)
Query: 297 GSKVASGSYGDLY--RGTYCSQDVAIKVLKPERINSDMQ----KEFAQEVFIMRKVRHKN 350
G ++ SG + + R + A K +K + + + +E +EV I+R+V H N
Sbjct: 17 GEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIEREVSILRQVLHHN 76
Query: 351 VVQFIGACTKPPSLCIVTEFMSGGSVYDYLHKLKGVF--KLPSLLKVAIDVSKGMNYLHQ 408
V+ + ++ E +SGG ++D+L + + + + S +K +D G+NYLH
Sbjct: 77 VITLHDVYENRTDVVLILELVSGGELFDFLAQKESLSEEEATSFIKQILD---GVNYLHT 133
Query: 409 NNIIHRDLKAAN-LLMDEN 426
I H DLK N +L+D+N
Sbjct: 134 KKIAHFDLKPENIMLLDKN 152
>pdb|2W4O|A Chain A, Crystal Structure Of Human Camk4 In Complex With 4-Amino(
Sulfamoyl-Phenylamino)-Triazole-Carbothioic Acid (2,6-
Difluoro-Phenyl)-Amide)
Length = 349
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 36/130 (27%), Positives = 65/130 (50%), Gaps = 13/130 (10%)
Query: 298 SKVASGSYGDLYRGTYCSQD-----VAIKVLKPERINSDMQKEFAQEVFIMRKVRHKNVV 352
S++ G+ +YR C Q A+KVLK + +K E+ ++ ++ H N++
Sbjct: 59 SELGRGATSIVYR---CKQKGTQKPYALKVLK----KTVDKKIVRTEIGVLLRLSHPNII 111
Query: 353 QFIGACTKPPSLCIVTEFMSGGSVYDYLHKLKGVFKLPSLLKVAIDVSKGMNYLHQNNII 412
+ P + +V E ++GG ++D + + KG + + + + YLH+N I+
Sbjct: 112 KLKEIFETPTEISLVLELVTGGELFDRIVE-KGYYSERDAADAVKQILEAVAYLHENGIV 170
Query: 413 HRDLKAANLL 422
HRDLK NLL
Sbjct: 171 HRDLKPENLL 180
>pdb|2A27|A Chain A, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|B Chain B, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|C Chain C, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|D Chain D, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|E Chain E, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|F Chain F, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|G Chain G, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|H Chain H, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
Length = 321
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 39/139 (28%), Positives = 70/139 (50%), Gaps = 12/139 (8%)
Query: 297 GSKVASGSYGDLY--RGTYCSQDVAIKVLKPERINSDMQ----KEFAQEVFIMRKVRHKN 350
G ++ SG + + R + A K +K + + + +E +EV I+R+V H N
Sbjct: 17 GEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIEREVSILRQVLHHN 76
Query: 351 VVQFIGACTKPPSLCIVTEFMSGGSVYDYLHKLKGVF--KLPSLLKVAIDVSKGMNYLHQ 408
V+ + ++ E +SGG ++D+L + + + + S +K +D G+NYLH
Sbjct: 77 VITLHDVYENRTDVVLILELVSGGELFDFLAQKESLSEEEATSFIKQILD---GVNYLHT 133
Query: 409 NNIIHRDLKAAN-LLMDEN 426
I H DLK N +L+D+N
Sbjct: 134 KKIAHFDLKPENIMLLDKN 152
>pdb|2YA9|A Chain A, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
pdb|2YA9|B Chain B, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
pdb|2YAA|A Chain A, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Atp
pdb|2YAA|B Chain B, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Atp
pdb|2YAB|A Chain A, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Amp
pdb|2YAB|B Chain B, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Amp
Length = 361
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 38/139 (27%), Positives = 70/139 (50%), Gaps = 12/139 (8%)
Query: 297 GSKVASGSYGDLY--RGTYCSQDVAIKVLKPERINSD----MQKEFAQEVFIMRKVRHKN 350
G ++ SG + + R + A K +K + + ++E +EV I+R+V H N
Sbjct: 17 GEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVCREEIEREVSILRQVLHPN 76
Query: 351 VVQFIGACTKPPSLCIVTEFMSGGSVYDYLHKLKGVF--KLPSLLKVAIDVSKGMNYLHQ 408
++ + ++ E +SGG ++D+L + + + + S +K +D G+NYLH
Sbjct: 77 IITLHDVYENRTDVVLILELVSGGELFDFLAQKESLSEEEATSFIKQILD---GVNYLHT 133
Query: 409 NNIIHRDLKAAN-LLMDEN 426
I H DLK N +L+D+N
Sbjct: 134 KKIAHFDLKPENIMLLDKN 152
>pdb|4EXU|A Chain A, Mapk13, Inactive Form
pdb|4EYJ|A Chain A, Mapk13 Complex With Inhibitor
pdb|4EYM|A Chain A, Mapk13 Complex With Inhibitor
Length = 371
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 41/149 (27%), Positives = 70/149 (46%), Gaps = 15/149 (10%)
Query: 287 WEIDPKHLKFGSKVASGSYGDLYRGT--YCSQDVAIKVLKPERINSDMQKEFAQEVFIMR 344
WE+ PK + V SG+YG + + VAIK L + K +E+ +++
Sbjct: 38 WEL-PKTYVSPTHVGSGAYGSVCSAIDKRSGEKVAIKKLSRPFQSEIFAKRAYRELLLLK 96
Query: 345 KVRHKNVVQFIGACTKPPSL------CIVTEFMSGGSVYDYLHKLKGV-FKLPSLLKVAI 397
++H+NV+ + T SL +V FM L K+ G+ F + +
Sbjct: 97 HMQHENVIGLLDVFTPASSLRNFYDFYLVMPFMQTD-----LQKIMGMEFSEEKIQYLVY 151
Query: 398 DVSKGMNYLHQNNIIHRDLKAANLLMDEN 426
+ KG+ Y+H ++HRDLK NL ++E+
Sbjct: 152 QMLKGLKYIHSAGVVHRDLKPGNLAVNED 180
>pdb|3COI|A Chain A, Crystal Structure Of P38delta Kinase
Length = 353
Score = 53.5 bits (127), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 41/149 (27%), Positives = 70/149 (46%), Gaps = 15/149 (10%)
Query: 287 WEIDPKHLKFGSKVASGSYGDLYRGT--YCSQDVAIKVLKPERINSDMQKEFAQEVFIMR 344
WE+ PK + V SG+YG + + VAIK L + K +E+ +++
Sbjct: 20 WEL-PKTYVSPTHVGSGAYGSVCSAIDKRSGEKVAIKKLSRPFQSEIFAKRAYRELLLLK 78
Query: 345 KVRHKNVVQFIGACTKPPSL------CIVTEFMSGGSVYDYLHKLKGV-FKLPSLLKVAI 397
++H+NV+ + T SL +V FM L K+ G+ F + +
Sbjct: 79 HMQHENVIGLLDVFTPASSLRNFYDFYLVMPFMQTD-----LQKIMGLKFSEEKIQYLVY 133
Query: 398 DVSKGMNYLHQNNIIHRDLKAANLLMDEN 426
+ KG+ Y+H ++HRDLK NL ++E+
Sbjct: 134 QMLKGLKYIHSAGVVHRDLKPGNLAVNED 162
>pdb|4EQM|A Chain A, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|B Chain B, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|C Chain C, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|D Chain D, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|E Chain E, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|F Chain F, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
Length = 294
Score = 53.5 bits (127), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 36/145 (24%), Positives = 68/145 (46%), Gaps = 4/145 (2%)
Query: 286 VWEIDPKHLKFGSKVASGSYGDLY--RGTYCSQDVAIK-VLKPERINSDMQKEFAQEVFI 342
+ +I + K K+ G +Y T + VAIK + P R + K F +EV
Sbjct: 5 IGKIINERYKIVDKLGGGGMSTVYLAEDTILNIKVAIKAIFIPPREKEETLKRFEREVHN 64
Query: 343 MRKVRHKNVVQFIGACTKPPSLCIVTEFMSGGSVYDYLHKLKGVFKLPSLLKVAIDVSKG 402
++ H+N+V I + +V E++ G ++ +Y+ G + + + + G
Sbjct: 65 SSQLSHQNIVSMIDVDEEDDCYYLVMEYIEGPTLSEYIES-HGPLSVDTAINFTNQILDG 123
Query: 403 MNYLHQNNIIHRDLKAANLLMDENE 427
+ + H I+HRD+K N+L+D N+
Sbjct: 124 IKHAHDMRIVHRDIKPQNILIDSNK 148
>pdb|2Z7Q|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk-1 Bound To Amp-Pcp
pdb|2Z7R|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk1 Bound To Staurosporine
pdb|2Z7S|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk1 Bound To Purvalnol A
Length = 321
Score = 53.1 bits (126), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 39/148 (26%), Positives = 73/148 (49%), Gaps = 18/148 (12%)
Query: 290 DPKHLKFGSKVASGSYGDLYRGTYCSQD-----VAIKVLKP------ERINSDMQKEFAQ 338
DP H + + GS+G ++ ++ A+KVLK +R+ + M+++
Sbjct: 26 DPSHFELLKVLGQGSFGKVFLVRKVTRPDSGHLYAMKVLKKATLKVRDRVRTKMERD--- 82
Query: 339 EVFIMRKVRHKNVVQFIGACTKPPSLCIVTEFMSGGSVYDYLHKLKGVFKLPSLLKVAID 398
I+ V H VV+ A L ++ +F+ GG ++ L K + +F + +
Sbjct: 83 ---ILADVNHPFVVKLHYAFQTEGKLYLILDFLRGGDLFTRLSK-EVMFTEEDVKFYLAE 138
Query: 399 VSKGMNYLHQNNIIHRDLKAANLLMDEN 426
++ G+++LH II+RDLK N+L+DE
Sbjct: 139 LALGLDHLHSLGIIYRDLKPENILLDEE 166
>pdb|1UNG|A Chain A, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNG|B Chain B, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNH|A Chain A, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNH|B Chain B, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNL|A Chain A, Structural Mechanism For The Inhibition Of Cd5-P25 From
The Roscovitine, Aloisine And Indirubin.
pdb|1UNL|B Chain B, Structural Mechanism For The Inhibition Of Cd5-P25 From
The Roscovitine, Aloisine And Indirubin.
pdb|3O0G|A Chain A, Crystal Structure Of Cdk5:p25 In Complex With An Atp
Analogue
pdb|3O0G|B Chain B, Crystal Structure Of Cdk5:p25 In Complex With An Atp
Analogue
Length = 292
Score = 53.1 bits (126), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 31/130 (23%), Positives = 63/130 (48%), Gaps = 3/130 (2%)
Query: 299 KVASGSYGDLYRGT--YCSQDVAIKVLKPERINSDMQKEFAQEVFIMRKVRHKNVVQFIG 356
K+ G+YG +++ + VA+K ++ + + + +E+ ++++++HKN+V+
Sbjct: 9 KIGEGTYGTVFKAKNRETHEIVALKRVRLDDDDEGVPSSALREICLLKELKHKNIVRLHD 68
Query: 357 ACTKPPSLCIVTEFMSGGSVYDYLHKLKGVFKLPSLLKVAIDVSKGMNYLHQNNIIHRDL 416
L +V EF + Y G + + KG+ + H N++HRDL
Sbjct: 69 VLHSDKKLTLVFEFCDQ-DLKKYFDSCNGDLDPEIVKSFLFQLLKGLGFCHSRNVLHRDL 127
Query: 417 KAANLLMDEN 426
K NLL++ N
Sbjct: 128 KPQNLLINRN 137
>pdb|1H4L|A Chain A, Structure And Regulation Of The Cdk5-P25(Nck5a) Complex
pdb|1H4L|B Chain B, Structure And Regulation Of The Cdk5-P25(Nck5a) Complex
Length = 292
Score = 53.1 bits (126), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 31/130 (23%), Positives = 63/130 (48%), Gaps = 3/130 (2%)
Query: 299 KVASGSYGDLYRGT--YCSQDVAIKVLKPERINSDMQKEFAQEVFIMRKVRHKNVVQFIG 356
K+ G+YG +++ + VA+K ++ + + + +E+ ++++++HKN+V+
Sbjct: 9 KIGEGTYGTVFKAKNRETHEIVALKRVRLDDDDEGVPSSALREICLLKELKHKNIVRLHD 68
Query: 357 ACTKPPSLCIVTEFMSGGSVYDYLHKLKGVFKLPSLLKVAIDVSKGMNYLHQNNIIHRDL 416
L +V EF + Y G + + KG+ + H N++HRDL
Sbjct: 69 VLHSDKKLTLVFEFCDQ-DLKKYFDSCNGDLDPEIVKSFLFQLLKGLGFCHSRNVLHRDL 127
Query: 417 KAANLLMDEN 426
K NLL++ N
Sbjct: 128 KPQNLLINRN 137
>pdb|4EOK|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Nu6102
pdb|4EOK|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Nu6102
pdb|4EOL|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Ro3306
pdb|4EOL|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Ro3306
Length = 300
Score = 53.1 bits (126), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 33/130 (25%), Positives = 68/130 (52%), Gaps = 6/130 (4%)
Query: 299 KVASGSYGDLY--RGTYCSQDVAIKVLKPERINSDMQKEFAQEVFIMRKVRHKNVVQFIG 356
K+ G+YG +Y R + VA+K ++ + + +E+ +++++ H N+V+ +
Sbjct: 12 KIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLD 71
Query: 357 ACTKPPSLCIVTEFMSGGSVYDYL--HKLKGVFKLPSLLKVAIDVSKGMNYLHQNNIIHR 414
L +V EF+S + D++ L G+ LP + + +G+ + H + ++HR
Sbjct: 72 VIHTENKLYLVFEFLSM-DLKDFMDASALTGI-PLPLIKSYLFQLLQGLAFCHSHRVLHR 129
Query: 415 DLKAANLLMD 424
DLK NLL++
Sbjct: 130 DLKPQNLLIN 139
>pdb|4EOJ|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With Atp
pdb|4EOJ|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With Atp
Length = 302
Score = 53.1 bits (126), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 33/130 (25%), Positives = 68/130 (52%), Gaps = 6/130 (4%)
Query: 299 KVASGSYGDLY--RGTYCSQDVAIKVLKPERINSDMQKEFAQEVFIMRKVRHKNVVQFIG 356
K+ G+YG +Y R + VA+K ++ + + +E+ +++++ H N+V+ +
Sbjct: 13 KIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLD 72
Query: 357 ACTKPPSLCIVTEFMSGGSVYDYL--HKLKGVFKLPSLLKVAIDVSKGMNYLHQNNIIHR 414
L +V EF+S + D++ L G+ LP + + +G+ + H + ++HR
Sbjct: 73 VIHTENKLYLVFEFLSM-DLKDFMDASALTGI-PLPLIKSYLFQLLQGLAFCHSHRVLHR 130
Query: 415 DLKAANLLMD 424
DLK NLL++
Sbjct: 131 DLKPQNLLIN 140
>pdb|3G51|A Chain A, Structural Diversity Of The Active Conformation Of The N-
Terminal Kinase Domain Of P90 Ribosomal S6 Kinase 2
Length = 325
Score = 53.1 bits (126), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 45/174 (25%), Positives = 80/174 (45%), Gaps = 25/174 (14%)
Query: 290 DPKHLKFGSKVASGSYGDLY-----RGTYCSQDVAIKVLKP------ERINSDMQKEFAQ 338
DP + + GS+G ++ G+ Q A+KVLK +R+ + M+++
Sbjct: 22 DPSQFELLKVLGQGSFGKVFLVKKISGSDARQLYAMKVLKKATLKVRDRVRTKMERD--- 78
Query: 339 EVFIMRKVRHKNVVQFIGACTKPPSLCIVTEFMSGGSVYDYLHKLKGVFKLPSLLKVAID 398
I+ +V H +V+ A L ++ +F+ GG ++ L K + +F + +
Sbjct: 79 ---ILVEVNHPFIVKLHYAFQTEGKLYLILDFLRGGDLFTRLSK-EVMFTEEDVKFYLAE 134
Query: 399 VSKGMNYLHQNNIIHRDLKAANLLMDENEVSLLLSLCLFTVSI-------LFCG 445
++ +++LH II+RDLK N+L+DE L L SI FCG
Sbjct: 135 LALALDHLHSLGIIYRDLKPENILLDEEGHIKLTDFGLSKESIDHEKKAYSFCG 188
>pdb|3T8O|A Chain A, Rhodopsin Kinase (grk1) L166k Mutant At 2.5a Resolution
Length = 543
Score = 52.8 bits (125), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 27/88 (30%), Positives = 47/88 (53%), Gaps = 3/88 (3%)
Query: 342 IMRKVRHKNVVQFIGACTKPPSLCIVTEFMSGGSVYDYLHKL---KGVFKLPSLLKVAID 398
I+ KV + +V A LC+V M+GG + +++ + F+ P +
Sbjct: 238 ILAKVHSRFIVSLAYAFETKTDLCLVMTIMNGGDIRYHIYNVDEDNPGFQEPRAIFYTAQ 297
Query: 399 VSKGMNYLHQNNIIHRDLKAANLLMDEN 426
+ G+ +LHQ NII+RDLK N+L+D++
Sbjct: 298 IVSGLEHLHQRNIIYRDLKPENVLLDDD 325
>pdb|1H1W|A Chain A, High Resolution Crystal Structure Of The Human Pdk1
Catalytic Domain
pdb|1UVR|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-8
Length = 289
Score = 52.8 bits (125), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 37/139 (26%), Positives = 63/139 (45%), Gaps = 4/139 (2%)
Query: 291 PKHLKFGSKVASGSYGD--LYRGTYCSQDVAIKVLKPERINSDMQKEF-AQEVFIMRKVR 347
P+ KFG + GS+ L R S++ AIK+L+ I + + + +E +M ++
Sbjct: 9 PEDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLD 68
Query: 348 HKNVVQFIGACTKPPSLCIVTEFMSGGSVYDYLHKLKGVFKLPSLLKVAIDVSKGMNYLH 407
H V+ L + G + Y+ K+ G F ++ + YLH
Sbjct: 69 HPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKI-GSFDETCTRFYTAEIVSALEYLH 127
Query: 408 QNNIIHRDLKAANLLMDEN 426
IIHRDLK N+L++E+
Sbjct: 128 GKGIIHRDLKPENILLNED 146
>pdb|3C4X|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.9a
pdb|3C4X|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.9a
pdb|3C4Y|A Chain A, Crystal Structure Of Apo Form Of G Protein Coupled
Receptor Kinase 1 At 7.51a
pdb|3C4Y|B Chain B, Crystal Structure Of Apo Form Of G Protein Coupled
Receptor Kinase 1 At 7.51a
pdb|3C4Z|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 1.84a
pdb|3C50|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 2.6a
pdb|3C50|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 2.6a
pdb|3C51|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 3.55a
pdb|3C51|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 3.55a
Length = 543
Score = 52.8 bits (125), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 27/88 (30%), Positives = 47/88 (53%), Gaps = 3/88 (3%)
Query: 342 IMRKVRHKNVVQFIGACTKPPSLCIVTEFMSGGSVYDYLHKL---KGVFKLPSLLKVAID 398
I+ KV + +V A LC+V M+GG + +++ + F+ P +
Sbjct: 238 ILAKVHSRFIVSLAYAFETKTDLCLVMTIMNGGDIRYHIYNVDEDNPGFQEPRAIFYTAQ 297
Query: 399 VSKGMNYLHQNNIIHRDLKAANLLMDEN 426
+ G+ +LHQ NII+RDLK N+L+D++
Sbjct: 298 IVSGLEHLHQRNIIYRDLKPENVLLDDD 325
>pdb|3C4W|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.7a
pdb|3C4W|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.7a
Length = 543
Score = 52.8 bits (125), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 27/88 (30%), Positives = 47/88 (53%), Gaps = 3/88 (3%)
Query: 342 IMRKVRHKNVVQFIGACTKPPSLCIVTEFMSGGSVYDYLHKL---KGVFKLPSLLKVAID 398
I+ KV + +V A LC+V M+GG + +++ + F+ P +
Sbjct: 238 ILAKVHSRFIVSLAYAFETKTDLCLVMTIMNGGDIRYHIYNVDEDNPGFQEPRAIFYTAQ 297
Query: 399 VSKGMNYLHQNNIIHRDLKAANLLMDEN 426
+ G+ +LHQ NII+RDLK N+L+D++
Sbjct: 298 IVSGLEHLHQRNIIYRDLKPENVLLDDD 325
>pdb|2Z2W|A Chain A, Humand Wee1 Kinase Complexed With Inhibitor Pf0335770
Length = 285
Score = 52.8 bits (125), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 33/139 (23%), Positives = 71/139 (51%), Gaps = 12/139 (8%)
Query: 299 KVASGSYGDLYRGTYCSQDV-----AIKVLKPERINSDMQKEFAQEVFIMRKV-RHKNVV 352
K+ SG +G +++ C + + AIK K S ++ +EV+ + +H +VV
Sbjct: 14 KIGSGEFGSVFK---CVKRLDGCIYAIKRSKKPLAGSVDEQNALREVYAHAVLGQHSHVV 70
Query: 353 QFIGACTKPPSLCIVTEFMSGGSVYDYL---HKLKGVFKLPSLLKVAIDVSKGMNYLHQN 409
++ A + + I E+ +GGS+ D + +++ FK L + + V +G+ Y+H
Sbjct: 71 RYFSAWAEDDHMLIQNEYCNGGSLADAISENYRIMSYFKEAELKDLLLQVGRGLRYIHSM 130
Query: 410 NIIHRDLKAANLLMDENEV 428
+++H D+K +N+ + +
Sbjct: 131 SLVHMDIKPSNIFISRTSI 149
>pdb|1UU9|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-3
Length = 286
Score = 52.8 bits (125), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 37/139 (26%), Positives = 63/139 (45%), Gaps = 4/139 (2%)
Query: 291 PKHLKFGSKVASGSYGD--LYRGTYCSQDVAIKVLKPERINSDMQKEF-AQEVFIMRKVR 347
P+ KFG + GS+ L R S++ AIK+L+ I + + + +E +M ++
Sbjct: 8 PEDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLD 67
Query: 348 HKNVVQFIGACTKPPSLCIVTEFMSGGSVYDYLHKLKGVFKLPSLLKVAIDVSKGMNYLH 407
H V+ L + G + Y+ K+ G F ++ + YLH
Sbjct: 68 HPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKI-GSFDETCTRFYTAEIVSALEYLH 126
Query: 408 QNNIIHRDLKAANLLMDEN 426
IIHRDLK N+L++E+
Sbjct: 127 GKGIIHRDLKPENILLNED 145
>pdb|2QG5|A Chain A, Cryptosporidium Parvum Calcium Dependent Protein Kinase
Cgd7_1840
pdb|2QG5|B Chain B, Cryptosporidium Parvum Calcium Dependent Protein Kinase
Cgd7_1840
pdb|2QG5|D Chain D, Cryptosporidium Parvum Calcium Dependent Protein Kinase
Cgd7_1840
Length = 294
Score = 52.8 bits (125), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 40/154 (25%), Positives = 66/154 (42%), Gaps = 21/154 (13%)
Query: 300 VASGSYGDLYRGTYCSQDVAIKVLKPERINSDMQK----------EFAQEVFIMRKVRHK 349
+ GS+G+ V I V K RI +K F QE+ IM+ + H
Sbjct: 34 IGRGSWGE----------VKIAVQKGTRIRRAAKKIPKYFVEDVDRFKQEIEIMKSLDHP 83
Query: 350 NVVQFIGACTKPPSLCIVTEFMSGGSVYDYLHKLKGVFKLPSLLKVAIDVSKGMNYLHQN 409
N+++ + +V E +GG +++ + K VF+ ++ DV + Y H+
Sbjct: 84 NIIRLYETFEDNTDIYLVMELCTGGELFERVVH-KRVFRESDAARIMKDVLSAVAYCHKL 142
Query: 410 NIIHRDLKAANLLMDENEVSLLLSLCLFTVSILF 443
N+ HRDLK N L + L L F ++ F
Sbjct: 143 NVAHRDLKPENFLFLTDSPDSPLKLIDFGLAARF 176
>pdb|1Z5M|A Chain A, Crystal Structure Of
N1-[3-[[5-bromo-2-[[3-[(1-pyrrolidinylcarbonyl)
Amino]phenyl]amino]-4-pyrimidinyl]amino]propyl]-2,2-
Dimethylpropanediamide Complexed With Human Pdk1
pdb|2PE0|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
5-Hydroxy-3-[1-(1h-Pyrrol-2-Yl)-Eth-(Z)-Ylidene]-1,
3-Dihydro- Indol-2-One Complex
pdb|2PE1|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
{2-Oxo-3-[1-(1h-Pyrrol-2-Yl)-Eth-(Z)-Ylidene]-2,
3-Dihydro-1h- Indol-5-Yl}-Urea {bx-517} Complex
pdb|2PE2|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
3-{5-[2-Oxo-5-Ureido-1,
2-Dihydro-Indol-(3z)-Ylidenemethyl]-1h-
Pyrrol-3-Yl}-N-(2-Piperidin-1-Yl-Ethyl)-Benzamide
Complex
Length = 286
Score = 52.8 bits (125), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 37/139 (26%), Positives = 63/139 (45%), Gaps = 4/139 (2%)
Query: 291 PKHLKFGSKVASGSYGD--LYRGTYCSQDVAIKVLKPERINSDMQKEF-AQEVFIMRKVR 347
P+ KFG + GS+ L R S++ AIK+L+ I + + + +E +M ++
Sbjct: 6 PEDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLD 65
Query: 348 HKNVVQFIGACTKPPSLCIVTEFMSGGSVYDYLHKLKGVFKLPSLLKVAIDVSKGMNYLH 407
H V+ L + G + Y+ K+ G F ++ + YLH
Sbjct: 66 HPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKI-GSFDETCTRFYTAEIVSALEYLH 124
Query: 408 QNNIIHRDLKAANLLMDEN 426
IIHRDLK N+L++E+
Sbjct: 125 GKGIIHRDLKPENILLNED 143
>pdb|3UBD|A Chain A, Structure Of N-Terminal Domain Of Rsk2 Kinase In Complex
With Flavonoid Glycoside Sl0101
Length = 304
Score = 52.8 bits (125), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 38/148 (25%), Positives = 73/148 (49%), Gaps = 18/148 (12%)
Query: 290 DPKHLKFGSKVASGSYGDLY-----RGTYCSQDVAIKVLKP------ERINSDMQKEFAQ 338
DP + + GS+G ++ G+ Q A+KVLK +R+ + M+++
Sbjct: 22 DPSQFELLKVLGQGSFGKVFLVKKISGSDARQLYAMKVLKKATLKVRDRVRTKMERD--- 78
Query: 339 EVFIMRKVRHKNVVQFIGACTKPPSLCIVTEFMSGGSVYDYLHKLKGVFKLPSLLKVAID 398
I+ +V H +V+ A L ++ +F+ GG ++ L K + +F + +
Sbjct: 79 ---ILVEVNHPFIVKLHYAFQTEGKLYLILDFLRGGDLFTRLSK-EVMFTEEDVKFYLAE 134
Query: 399 VSKGMNYLHQNNIIHRDLKAANLLMDEN 426
++ +++LH II+RDLK N+L+DE
Sbjct: 135 LALALDHLHSLGIIYRDLKPENILLDEE 162
>pdb|4EL9|A Chain A, Structure Of N-Terminal Kinase Domain Of Rsk2 With Afzelin
pdb|4GUE|A Chain A, Structure Of N-terminal Kinase Domain Of Rsk2 With
Flavonoid Glycoside Quercitrin
Length = 305
Score = 52.8 bits (125), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 38/148 (25%), Positives = 73/148 (49%), Gaps = 18/148 (12%)
Query: 290 DPKHLKFGSKVASGSYGDLY-----RGTYCSQDVAIKVLKP------ERINSDMQKEFAQ 338
DP + + GS+G ++ G+ Q A+KVLK +R+ + M+++
Sbjct: 23 DPSQFELLKVLGQGSFGKVFLVKKISGSDARQLYAMKVLKKATLKVRDRVRTKMERD--- 79
Query: 339 EVFIMRKVRHKNVVQFIGACTKPPSLCIVTEFMSGGSVYDYLHKLKGVFKLPSLLKVAID 398
I+ +V H +V+ A L ++ +F+ GG ++ L K + +F + +
Sbjct: 80 ---ILVEVNHPFIVKLHYAFQTEGKLYLILDFLRGGDLFTRLSK-EVMFTEEDVKFYLAE 135
Query: 399 VSKGMNYLHQNNIIHRDLKAANLLMDEN 426
++ +++LH II+RDLK N+L+DE
Sbjct: 136 LALALDHLHSLGIIYRDLKPENILLDEE 163
>pdb|3QC9|A Chain A, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|B Chain B, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|C Chain C, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|D Chain D, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
Length = 543
Score = 52.8 bits (125), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 27/88 (30%), Positives = 47/88 (53%), Gaps = 3/88 (3%)
Query: 342 IMRKVRHKNVVQFIGACTKPPSLCIVTEFMSGGSVYDYLHKL---KGVFKLPSLLKVAID 398
I+ KV + +V A LC+V M+GG + +++ + F+ P +
Sbjct: 238 ILAKVHSRFIVSLAYAFETKTDLCLVMTIMNGGDIRYHIYNVDEDNPGFQEPRAIFYTAQ 297
Query: 399 VSKGMNYLHQNNIIHRDLKAANLLMDEN 426
+ G+ +LHQ NII+RDLK N+L+D++
Sbjct: 298 IVSGLEHLHQRNIIYRDLKPENVLLDDD 325
>pdb|2IN6|A Chain A, Wee1 Kinase Complex With Inhibitor Pd311839
pdb|2IO6|A Chain A, Wee1 Kinase Complexed With Inhibitor Pd330961
Length = 287
Score = 52.8 bits (125), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 33/139 (23%), Positives = 71/139 (51%), Gaps = 12/139 (8%)
Query: 299 KVASGSYGDLYRGTYCSQDV-----AIKVLKPERINSDMQKEFAQEVFIMRKV-RHKNVV 352
K+ SG +G +++ C + + AIK K S ++ +EV+ + +H +VV
Sbjct: 16 KIGSGEFGSVFK---CVKRLDGCIYAIKRSKKPLAGSVDEQNALREVYAHAVLGQHSHVV 72
Query: 353 QFIGACTKPPSLCIVTEFMSGGSVYDYL---HKLKGVFKLPSLLKVAIDVSKGMNYLHQN 409
++ A + + I E+ +GGS+ D + +++ FK L + + V +G+ Y+H
Sbjct: 73 RYFSAWAEDDHMLIQNEYCNGGSLADAISENYRIMSYFKEAELKDLLLQVGRGLRYIHSM 132
Query: 410 NIIHRDLKAANLLMDENEV 428
+++H D+K +N+ + +
Sbjct: 133 SLVHMDIKPSNIFISRTSI 151
>pdb|3F3Z|A Chain A, Crystal Structure Of Cryptosporidium Parvum Calcium
Dependent Protein Kinase Cgd7_1840 In Presence Of
Indirubin E804
Length = 277
Score = 52.4 bits (124), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 40/154 (25%), Positives = 66/154 (42%), Gaps = 21/154 (13%)
Query: 300 VASGSYGDLYRGTYCSQDVAIKVLKPERINSDMQK----------EFAQEVFIMRKVRHK 349
+ GS+G+ V I V K RI +K F QE+ IM+ + H
Sbjct: 17 IGRGSWGE----------VKIAVQKGTRIRRAAKKIPKYFVEDVDRFKQEIEIMKSLDHP 66
Query: 350 NVVQFIGACTKPPSLCIVTEFMSGGSVYDYLHKLKGVFKLPSLLKVAIDVSKGMNYLHQN 409
N+++ + +V E +GG +++ + K VF+ ++ DV + Y H+
Sbjct: 67 NIIRLYETFEDNTDIYLVMELCTGGELFERVVH-KRVFRESDAARIMKDVLSAVAYCHKL 125
Query: 410 NIIHRDLKAANLLMDENEVSLLLSLCLFTVSILF 443
N+ HRDLK N L + L L F ++ F
Sbjct: 126 NVAHRDLKPENFLFLTDSPDSPLKLIDFGLAARF 159
>pdb|3NUS|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment8
pdb|3NUU|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment11
pdb|3NUY|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment17
Length = 286
Score = 52.4 bits (124), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 37/139 (26%), Positives = 63/139 (45%), Gaps = 4/139 (2%)
Query: 291 PKHLKFGSKVASGSYGD--LYRGTYCSQDVAIKVLKPERINSDMQKEF-AQEVFIMRKVR 347
P+ KFG + GS+ L R S++ AIK+L+ I + + + +E +M ++
Sbjct: 7 PEDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLD 66
Query: 348 HKNVVQFIGACTKPPSLCIVTEFMSGGSVYDYLHKLKGVFKLPSLLKVAIDVSKGMNYLH 407
H V+ L + G + Y+ K+ G F ++ + YLH
Sbjct: 67 HPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKI-GSFDETCTRFYTAEIVSALEYLH 125
Query: 408 QNNIIHRDLKAANLLMDEN 426
IIHRDLK N+L++E+
Sbjct: 126 GKGIIHRDLKPENILLNED 144
>pdb|3BI6|A Chain A, Wee1 Kinase Complex With Inhibitor Pd352396
pdb|3BIZ|A Chain A, Wee1 Kinase Complex With Inhibitor Pd331618
pdb|3CQE|A Chain A, Wee1 Kinase Complex With Inhibitor Pd074291
pdb|3CR0|A Chain A, Wee1 Kinase Complex With Inhibitor Pd259_809
Length = 287
Score = 52.4 bits (124), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 33/139 (23%), Positives = 71/139 (51%), Gaps = 12/139 (8%)
Query: 299 KVASGSYGDLYRGTYCSQDV-----AIKVLKPERINSDMQKEFAQEVFIMRKV-RHKNVV 352
K+ SG +G +++ C + + AIK K S ++ +EV+ + +H +VV
Sbjct: 16 KIGSGEFGSVFK---CVKRLDGCIYAIKRSKKPLAGSVDEQNALREVYAHAVLGQHSHVV 72
Query: 353 QFIGACTKPPSLCIVTEFMSGGSVYDYL---HKLKGVFKLPSLLKVAIDVSKGMNYLHQN 409
++ A + + I E+ +GGS+ D + +++ FK L + + V +G+ Y+H
Sbjct: 73 RYFSAWAEDDHMLIQNEYCNGGSLADAISENYRIMSYFKEAELKDLLLQVGRGLRYIHSM 132
Query: 410 NIIHRDLKAANLLMDENEV 428
+++H D+K +N+ + +
Sbjct: 133 SLVHMDIKPSNIFISRTSI 151
>pdb|1X8B|A Chain A, Structure Of Human Wee1a Kinase: Kinase Domain Complexed
With Inhibitor Pd0407824
Length = 289
Score = 52.4 bits (124), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 33/139 (23%), Positives = 71/139 (51%), Gaps = 12/139 (8%)
Query: 299 KVASGSYGDLYRGTYCSQDV-----AIKVLKPERINSDMQKEFAQEVFIMRKV-RHKNVV 352
K+ SG +G +++ C + + AIK K S ++ +EV+ + +H +VV
Sbjct: 18 KIGSGEFGSVFK---CVKRLDGCIYAIKRSKKPLAGSVDEQNALREVYAHAVLGQHSHVV 74
Query: 353 QFIGACTKPPSLCIVTEFMSGGSVYDYL---HKLKGVFKLPSLLKVAIDVSKGMNYLHQN 409
++ A + + I E+ +GGS+ D + +++ FK L + + V +G+ Y+H
Sbjct: 75 RYFSAWAEDDHMLIQNEYCNGGSLADAISENYRIMSYFKEAELKDLLLQVGRGLRYIHSM 134
Query: 410 NIIHRDLKAANLLMDENEV 428
+++H D+K +N+ + +
Sbjct: 135 SLVHMDIKPSNIFISRTSI 153
>pdb|3CIK|A Chain A, Human Grk2 In Complex With Gbetagamma Subunits
pdb|3V5W|A Chain A, Human G Protein-Coupled Receptor Kinase 2 In Complex With
Soluble Gbetagamma Subunits And Paroxetine
Length = 689
Score = 52.4 bits (124), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 36/133 (27%), Positives = 64/133 (48%), Gaps = 7/133 (5%)
Query: 300 VASGSYGDLY--RGTYCSQDVAIKVLKPERINSDMQKEFAQEVFIMRKVRHKNVVQFI-- 355
+ G +G++Y R + A+K L +RI + A IM + FI
Sbjct: 197 IGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVSTGDCPFIVC 256
Query: 356 --GACTKPPSLCIVTEFMSGGSVYDYLHKLKGVFKLPSLLKVAIDVSKGMNYLHQNNIIH 413
A P L + + M+GG ++ +L + GVF + A ++ G+ ++H +++
Sbjct: 257 MSYAFHTPDKLSFILDLMNGGDLHYHLSQ-HGVFSEADMRFYAAEIILGLEHMHNRFVVY 315
Query: 414 RDLKAANLLMDEN 426
RDLK AN+L+DE+
Sbjct: 316 RDLKPANILLDEH 328
>pdb|3VHE|A Chain A, Crystal Structure Of Human Vegfr2 Kinase Domain With A
Novel Pyrrolopyrimidine Inhibitor
Length = 359
Score = 52.4 bits (124), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 33/118 (27%), Positives = 56/118 (47%), Gaps = 9/118 (7%)
Query: 278 KIPNDGTDVWEIDPKHLKFGSKVASGSYGDLYRG-------TYCSQDVAIKVLKPERINS 330
++P D + WE LK G + G++G + T + VA+K+LK +S
Sbjct: 9 RLPYDASK-WEFPRDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHS 67
Query: 331 DMQKEFAQEVFIMRKVRHKNVVQFIGACTKPPS-LCIVTEFMSGGSVYDYLHKLKGVF 387
+ + ++ ++ H NVV +GACTKP L ++ EF G++ YL + F
Sbjct: 68 EHRALMSELKILIHIGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEF 125
Score = 38.5 bits (88), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 20/57 (35%), Positives = 30/57 (52%), Gaps = 3/57 (5%)
Query: 384 KGVFKLPSLLKVAIDVSKGMNYLHQNNIIHRDLKAANLLMDENEVSLLLSLCLFTVS 440
K L L+ + V+KGM +L IHRDL A N+L+ E V + +C F ++
Sbjct: 187 KDFLTLEHLICYSFQVAKGMEFLASRKCIHRDLAARNILLSEKNV---VKICDFGLA 240
>pdb|3KRW|A Chain A, Human Grk2 In Complex With Gbetgamma Subunits And Balanol
(Soak)
pdb|3KRX|A Chain A, Human Grk2 In Complex With Gbetgamma Subunits And Balanol
(Co-Crystal)
Length = 688
Score = 52.4 bits (124), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 36/133 (27%), Positives = 64/133 (48%), Gaps = 7/133 (5%)
Query: 300 VASGSYGDLY--RGTYCSQDVAIKVLKPERINSDMQKEFAQEVFIMRKVRHKNVVQFI-- 355
+ G +G++Y R + A+K L +RI + A IM + FI
Sbjct: 196 IGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVSTGDCPFIVC 255
Query: 356 --GACTKPPSLCIVTEFMSGGSVYDYLHKLKGVFKLPSLLKVAIDVSKGMNYLHQNNIIH 413
A P L + + M+GG ++ +L + GVF + A ++ G+ ++H +++
Sbjct: 256 MSYAFHTPDKLSFILDLMNGGDLHYHLSQ-HGVFSEADMRFYAAEIILGLEHMHNRFVVY 314
Query: 414 RDLKAANLLMDEN 426
RDLK AN+L+DE+
Sbjct: 315 RDLKPANILLDEH 327
>pdb|2PK9|A Chain A, Structure Of The Pho85-pho80 Cdk-cyclin Complex Of The
Phosphate-responsive Signal Transduction Pathway
pdb|2PK9|C Chain C, Structure Of The Pho85-pho80 Cdk-cyclin Complex Of The
Phosphate-responsive Signal Transduction Pathway
pdb|2PMI|A Chain A, Structure Of The Pho85-Pho80 Cdk-Cyclin Complex Of The
Phosphate- Responsive Signal Transduction Pathway With
Bound Atp-Gamma-S
pdb|2PMI|C Chain C, Structure Of The Pho85-Pho80 Cdk-Cyclin Complex Of The
Phosphate- Responsive Signal Transduction Pathway With
Bound Atp-Gamma-S
Length = 317
Score = 52.4 bits (124), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 35/135 (25%), Positives = 72/135 (53%), Gaps = 11/135 (8%)
Query: 299 KVASGSYGDLYRGTYCSQDVAIKVLKPERINSD--MQKEFAQEVFIMRKVRHKNVVQFIG 356
K+ +G+Y +Y+G + V + LK +++S+ +E+ +M++++H+N+V+
Sbjct: 12 KLGNGTYATVYKGLNKTTGVYV-ALKEVKLDSEEGTPSTAIREISLMKELKHENIVRLYD 70
Query: 357 ACTKPPSLCIVTEFMSGGSVYDYLHKLKGVFKLPSLLKVAI------DVSKGMNYLHQNN 410
L +V EFM + Y+ + V P L++ + + +G+ + H+N
Sbjct: 71 VIHTENKLTLVFEFMDN-DLKKYMDS-RTVGNTPRGLELNLVKYFQWQLLQGLAFCHENK 128
Query: 411 IIHRDLKAANLLMDE 425
I+HRDLK NLL+++
Sbjct: 129 ILHRDLKPQNLLINK 143
>pdb|1OMW|A Chain A, Crystal Structure Of The Complex Between G Protein-Coupled
Receptor Kinase 2 And Heterotrimeric G Protein Beta 1
And Gamma 2 Subunits
pdb|1YM7|A Chain A, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|B Chain B, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|C Chain C, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|D Chain D, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|2BCJ|A Chain A, Crystal Structure Of G Protein-coupled Receptor Kinase 2
In Complex With Galpha-q And Gbetagamma Subunits
pdb|3UZS|A Chain A, Structure Of The C13.28 Rna Aptamer Bound To The G
Protein-Coupled Receptor Kinase 2-Heterotrimeric G
Protein Beta 1 And Gamma 2 Subunit Complex
pdb|3UZT|A Chain A, Structure Of The C13.18 Rna Aptamer In Complex With G
Protein-Coupled Receptor Kinase 2
Length = 689
Score = 52.4 bits (124), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 35/133 (26%), Positives = 64/133 (48%), Gaps = 7/133 (5%)
Query: 300 VASGSYGDLY--RGTYCSQDVAIKVLKPERINSDMQKEFAQEVFIMRKVRHKNVVQFIGA 357
+ G +G++Y R + A+K L +RI + A IM + FI
Sbjct: 197 IGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVSTGDCPFIVC 256
Query: 358 CT----KPPSLCIVTEFMSGGSVYDYLHKLKGVFKLPSLLKVAIDVSKGMNYLHQNNIIH 413
+ P L + + M+GG ++ +L + GVF + A ++ G+ ++H +++
Sbjct: 257 MSYAFHTPDKLSFILDLMNGGDLHYHLSQ-HGVFSEADMRFYAAEIILGLEHMHNRFVVY 315
Query: 414 RDLKAANLLMDEN 426
RDLK AN+L+DE+
Sbjct: 316 RDLKPANILLDEH 328
>pdb|3VHK|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Back Pocket Binder
Length = 368
Score = 52.4 bits (124), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 33/118 (27%), Positives = 56/118 (47%), Gaps = 9/118 (7%)
Query: 278 KIPNDGTDVWEIDPKHLKFGSKVASGSYGDLYRG-------TYCSQDVAIKVLKPERINS 330
++P D + WE LK G + G++G + T + VA+K+LK +S
Sbjct: 16 RLPYDASK-WEFPRDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHS 74
Query: 331 DMQKEFAQEVFIMRKVRHKNVVQFIGACTKPPS-LCIVTEFMSGGSVYDYLHKLKGVF 387
+ + ++ ++ H NVV +GACTKP L ++ EF G++ YL + F
Sbjct: 75 EHRALMSELKILIHIGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEF 132
Score = 38.5 bits (88), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 20/57 (35%), Positives = 30/57 (52%), Gaps = 3/57 (5%)
Query: 384 KGVFKLPSLLKVAIDVSKGMNYLHQNNIIHRDLKAANLLMDENEVSLLLSLCLFTVS 440
K L L+ + V+KGM +L IHRDL A N+L+ E V + +C F ++
Sbjct: 194 KDFLTLEHLICYSFQVAKGMEFLASRKCIHRDLAARNILLSEKNV---VKICDFGLA 247
>pdb|3PSC|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits
pdb|3PVU|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits And A
Selective Kinase Inhibitor (Cmpd101)
pdb|3PVW|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits And A
Selective Kinase Inhibitor (Cmpd103a)
Length = 695
Score = 52.4 bits (124), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 35/133 (26%), Positives = 64/133 (48%), Gaps = 7/133 (5%)
Query: 300 VASGSYGDLY--RGTYCSQDVAIKVLKPERINSDMQKEFAQEVFIMRKVRHKNVVQFIGA 357
+ G +G++Y R + A+K L +RI + A IM + FI
Sbjct: 197 IGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVSTGDCPFIVC 256
Query: 358 CT----KPPSLCIVTEFMSGGSVYDYLHKLKGVFKLPSLLKVAIDVSKGMNYLHQNNIIH 413
+ P L + + M+GG ++ +L + GVF + A ++ G+ ++H +++
Sbjct: 257 MSYAFHTPDKLSFILDLMNGGDLHYHLSQ-HGVFSEADMRFYAAEIILGLEHMHNRFVVY 315
Query: 414 RDLKAANLLMDEN 426
RDLK AN+L+DE+
Sbjct: 316 RDLKPANILLDEH 328
>pdb|1Y6A|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
2-Anilino-5-Aryl-Oxazole Inhibitor
pdb|1Y6B|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
2-Anilino-5-Aryl-Oxazole Inhibitor
Length = 366
Score = 52.0 bits (123), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 33/118 (27%), Positives = 56/118 (47%), Gaps = 9/118 (7%)
Query: 278 KIPNDGTDVWEIDPKHLKFGSKVASGSYGDLYRG-------TYCSQDVAIKVLKPERINS 330
++P D + WE LK G + G++G + T + VA+K+LK +S
Sbjct: 14 RLPYDASK-WEFPRDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHS 72
Query: 331 DMQKEFAQEVFIMRKVRHKNVVQFIGACTKPPS-LCIVTEFMSGGSVYDYLHKLKGVF 387
+ + ++ ++ H NVV +GACTKP L ++ EF G++ YL + F
Sbjct: 73 EHRALMSELKILIHIGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEF 130
Score = 38.5 bits (88), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 20/57 (35%), Positives = 30/57 (52%), Gaps = 3/57 (5%)
Query: 384 KGVFKLPSLLKVAIDVSKGMNYLHQNNIIHRDLKAANLLMDENEVSLLLSLCLFTVS 440
K L L+ + V+KGM +L IHRDL A N+L+ E V + +C F ++
Sbjct: 192 KDFLTLEHLICYSFQVAKGMEFLASRKCIHRDLAARNILLSEKNV---VKICDFGLA 245
>pdb|4FG7|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-293 In Complex With Atp
Length = 293
Score = 52.0 bits (123), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 32/112 (28%), Positives = 56/112 (50%), Gaps = 5/112 (4%)
Query: 318 VAIKVLKPERINSDMQKEFAQEVFIMRKVRHKNVVQFIGACTKPPSLCIVTEFMSGGSVY 377
VAIK + E + + E+ ++ K++H N+V L ++ + +SGG ++
Sbjct: 46 VAIKCIAKEALEGK-EGSMENEIAVLHKIKHPNIVALDDIYESGGHLYLIMQLVSGGELF 104
Query: 378 DYLHKLKGVFKLPSLLKVAIDVSKGMNYLHQNNIIHRDLKAANLL---MDEN 426
D + + KG + ++ V + YLH I+HRDLK NLL +DE+
Sbjct: 105 DRIVE-KGFYTERDASRLIFQVLDAVKYLHDLGIVHRDLKPENLLYYSLDED 155
>pdb|3VID|A Chain A, Crystal Structure Of Human Vegfr2 Kinase Domain With
Compound A
Length = 356
Score = 52.0 bits (123), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 33/118 (27%), Positives = 56/118 (47%), Gaps = 9/118 (7%)
Query: 278 KIPNDGTDVWEIDPKHLKFGSKVASGSYGDLYRG-------TYCSQDVAIKVLKPERINS 330
++P D + WE LK G + G++G + T + VA+K+LK +S
Sbjct: 7 RLPYDASK-WEFPRDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHS 65
Query: 331 DMQKEFAQEVFIMRKVRHKNVVQFIGACTKPPS-LCIVTEFMSGGSVYDYLHKLKGVF 387
+ + ++ ++ H NVV +GACTKP L ++ EF G++ YL + F
Sbjct: 66 EHRALMSELKILIHIGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEF 123
Score = 38.5 bits (88), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 20/57 (35%), Positives = 30/57 (52%), Gaps = 3/57 (5%)
Query: 384 KGVFKLPSLLKVAIDVSKGMNYLHQNNIIHRDLKAANLLMDENEVSLLLSLCLFTVS 440
K L L+ + V+KGM +L IHRDL A N+L+ E V + +C F ++
Sbjct: 185 KDFLTLEHLICYSFQVAKGMEFLASRKCIHRDLAARNILLSEKNV---VKICDFGLA 238
>pdb|4FG8|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-315 In Complex With Atp
pdb|4FG8|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-315 In Complex With Atp
Length = 315
Score = 52.0 bits (123), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 32/112 (28%), Positives = 56/112 (50%), Gaps = 5/112 (4%)
Query: 318 VAIKVLKPERINSDMQKEFAQEVFIMRKVRHKNVVQFIGACTKPPSLCIVTEFMSGGSVY 377
VAIK + E + + E+ ++ K++H N+V L ++ + +SGG ++
Sbjct: 46 VAIKCIAKEALEGK-EGSMENEIAVLHKIKHPNIVALDDIYESGGHLYLIMQLVSGGELF 104
Query: 378 DYLHKLKGVFKLPSLLKVAIDVSKGMNYLHQNNIIHRDLKAANLL---MDEN 426
D + + KG + ++ V + YLH I+HRDLK NLL +DE+
Sbjct: 105 DRIVE-KGFYTERDASRLIFQVLDAVKYLHDLGIVHRDLKPENLLYYSLDED 155
>pdb|4FG9|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-320 In Complex With Atp
pdb|4FG9|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-320 In Complex With Atp
pdb|4FGB|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I Apo Form
Length = 320
Score = 51.6 bits (122), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 32/112 (28%), Positives = 56/112 (50%), Gaps = 5/112 (4%)
Query: 318 VAIKVLKPERINSDMQKEFAQEVFIMRKVRHKNVVQFIGACTKPPSLCIVTEFMSGGSVY 377
VAIK + E + + E+ ++ K++H N+V L ++ + +SGG ++
Sbjct: 46 VAIKCIAKEALEGK-EGSMENEIAVLHKIKHPNIVALDDIYESGGHLYLIMQLVSGGELF 104
Query: 378 DYLHKLKGVFKLPSLLKVAIDVSKGMNYLHQNNIIHRDLKAANLL---MDEN 426
D + + KG + ++ V + YLH I+HRDLK NLL +DE+
Sbjct: 105 DRIVE-KGFYTERDASRLIFQVLDAVKYLHDLGIVHRDLKPENLLYYSLDED 155
>pdb|2VRX|A Chain A, Structure Of Aurora B Kinase In Complex With Zm447439
pdb|2VRX|B Chain B, Structure Of Aurora B Kinase In Complex With Zm447439
Length = 285
Score = 51.6 bits (122), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 33/130 (25%), Positives = 63/130 (48%), Gaps = 4/130 (3%)
Query: 297 GSKVASGSYGDLY--RGTYCSQDVAIKVLKPERINSD-MQKEFAQEVFIMRKVRHKNVVQ 353
G + G +G++Y R +A+KVL ++ + ++ + +E+ I +RH N+++
Sbjct: 20 GRPLGKGKFGNVYLAREKQNKFIMALKVLFKSQLEKEGVEHQLRREIEIQSHLRHPNILR 79
Query: 354 FIGACTKPPSLCIVTEFMSGGSVYDYLHKLKGVFKLPSLLKVAIDVSKGMNYLHQNNIIH 413
+ ++ EF G +Y L K G F +++ ++Y H+ +IH
Sbjct: 80 MYNYFHDRKRIYLMLEFAPRGELYKELQK-HGRFDEQRSATFMEELADALHYCHERKVIH 138
Query: 414 RDLKAANLLM 423
RD+K NLLM
Sbjct: 139 RDIKPENLLM 148
>pdb|2BFX|A Chain A, Mechanism Of Aurora-B Activation By Incenp And Inhibition
By Hesperidin.
pdb|2BFX|B Chain B, Mechanism Of Aurora-B Activation By Incenp And Inhibition
By Hesperidin.
pdb|2VGP|A Chain A, Crystal Structure Of Aurora B Kinase In Complex With A
Aminothiazole Inhibitor
pdb|2VGP|B Chain B, Crystal Structure Of Aurora B Kinase In Complex With A
Aminothiazole Inhibitor
pdb|2VGO|A Chain A, Crystal Structure Of Aurora B Kinase In Complex With
Reversine Inhibitor
pdb|2VGO|B Chain B, Crystal Structure Of Aurora B Kinase In Complex With
Reversine Inhibitor
pdb|3ZTX|A Chain A, Aurora Kinase Selective Inhibitors Identified Using A
Taxol- Induced Checkpoint Sensitivity Screen.
pdb|3ZTX|B Chain B, Aurora Kinase Selective Inhibitors Identified Using A
Taxol- Induced Checkpoint Sensitivity Screen
Length = 284
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 33/130 (25%), Positives = 63/130 (48%), Gaps = 4/130 (3%)
Query: 297 GSKVASGSYGDLY--RGTYCSQDVAIKVLKPERINSD-MQKEFAQEVFIMRKVRHKNVVQ 353
G + G +G++Y R +A+KVL ++ + ++ + +E+ I +RH N+++
Sbjct: 19 GRPLGKGKFGNVYLAREKQNKFIMALKVLFKSQLEKEGVEHQLRREIEIQSHLRHPNILR 78
Query: 354 FIGACTKPPSLCIVTEFMSGGSVYDYLHKLKGVFKLPSLLKVAIDVSKGMNYLHQNNIIH 413
+ ++ EF G +Y L K G F +++ ++Y H+ +IH
Sbjct: 79 MYNYFHDRKRIYLMLEFAPRGELYKELQK-HGRFDEQRSATFMEELADALHYCHERKVIH 137
Query: 414 RDLKAANLLM 423
RD+K NLLM
Sbjct: 138 RDIKPENLLM 147
>pdb|3GBZ|A Chain A, Structure Of The Cmgc Cdk Kinase From Giardia Lamblia
pdb|3GC0|A Chain A, Structure Of The Cmgc Cdk Kinase From Giardia Lamblia In
Complex With Amp
Length = 329
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 32/134 (23%), Positives = 69/134 (51%), Gaps = 4/134 (2%)
Query: 298 SKVASGSYGDLYRG--TYCSQDVAIKVLKPERINSDMQKEFAQEVFIMRKVRHKNVVQFI 355
+K+ G+YG++Y+ T ++ VAIK ++ E + +EV ++++++H+N+++
Sbjct: 40 TKLGEGTYGEVYKAIDTVTNETVAIKRIRLEHEEEGVPGTAIREVSLLKELQHRNIIELK 99
Query: 356 GACTKPPSLCIVTEFMSGGSVYDYLHKLKGVFKLPSLLKVAIDVSKGMNYLHQNNIIHRD 415
L ++ E+ + + Y+ K V + + + G+N+ H +HRD
Sbjct: 100 SVIHHNHRLHLIFEY-AENDLKKYMDKNPDV-SMRVIKSFLYQLINGVNFCHSRRCLHRD 157
Query: 416 LKAANLLMDENEVS 429
LK NLL+ ++ S
Sbjct: 158 LKPQNLLLSVSDAS 171
>pdb|2OZA|B Chain B, Structure Of P38alpha Complex
pdb|3P78|A Chain A, P38 Inhibitor-Bound
pdb|3P79|A Chain A, P38 Inhibitor-Bound
pdb|3P7A|A Chain A, P38 Inhibitor-Bound
pdb|3P7B|A Chain A, P38 Inhibitor-Bound
pdb|3P7C|A Chain A, P38 Inhibitor-Bound
pdb|3P5K|A Chain A, P38 Inhibitor-Bound
Length = 366
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 41/154 (26%), Positives = 71/154 (46%), Gaps = 22/154 (14%)
Query: 286 VWEIDPKHLKFGSKVASGSYGDLYRG--TYCSQDVAIKVLKPERINSDMQKEFAQEVFIM 343
+WE+ P+ + S V SG+YG + T VA+K L + K +E+ ++
Sbjct: 23 IWEV-PERYQNLSPVGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLL 81
Query: 344 RKVRHKNVVQFIGACTKPPSL------CIVTEFMSGGSVYDYLHKLKGVFKLPSLLK--- 394
+ ++H+NV+ + T SL +VT M L + K L
Sbjct: 82 KHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGA--------DLNNIVKCQKLTDDHV 133
Query: 395 --VAIDVSKGMNYLHQNNIIHRDLKAANLLMDEN 426
+ + +G+ Y+H +IIHRDLK +NL ++E+
Sbjct: 134 QFLIYQILRGLKYIHSADIIHRDLKPSNLAVNED 167
>pdb|3OHT|A Chain A, Crystal Structure Of Salmo Salar P38alpha
pdb|3OHT|B Chain B, Crystal Structure Of Salmo Salar P38alpha
Length = 389
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 40/154 (25%), Positives = 70/154 (45%), Gaps = 22/154 (14%)
Query: 286 VWEIDPKHLKFGSKVASGSYGDLYRGTYCSQDVAIKVLKPERINSDM--QKEFAQEVFIM 343
+WE+ P+ + S V SG+YG + + I V K R + K +E+ ++
Sbjct: 46 IWEV-PERYQTLSPVGSGAYGSVCSSYDVKSGLKIAVKKLSRPFQSIIHAKRTYRELRLL 104
Query: 344 RKVRHKNVVQFIGACTKPPSL------CIVTEFMSGGSVYDYLHKLKGVFKLPSLLK--- 394
+ ++H+NV+ + T SL +VT M L + K L
Sbjct: 105 KHMKHENVIGLLDVFTPATSLEEFNDVYLVTHLMGA--------DLNNIVKCQKLTDDHV 156
Query: 395 --VAIDVSKGMNYLHQNNIIHRDLKAANLLMDEN 426
+ + +G+ Y+H +IIHRDLK +NL ++E+
Sbjct: 157 QFLIYQILRGLKYIHSADIIHRDLKPSNLAVNED 190
>pdb|1KOA|A Chain A, Twitchin Kinase Fragment (C.Elegans), Autoregulated
Protein Kinase And Immunoglobulin Domains
Length = 491
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 35/145 (24%), Positives = 69/145 (47%), Gaps = 9/145 (6%)
Query: 293 HLKFGSKVASGSYGDLYRGT--YCSQDVAIK-VLKPERINSDMQKEFAQEVFIMRKVRHK 349
H ++ +G++G ++R T + A K V+ P + + + +E+ M +RH
Sbjct: 52 HYDIHEELGTGAFGVVHRVTERATGNNFAAKFVMTPHESDKETVR---KEIQTMSVLRHP 108
Query: 350 NVVQFIGACTKPPSLCIVTEFMSGGSVYDYLHKLKGVFKLPSLLKVAIDVSKGMNYLHQN 409
+V A + ++ EFMSGG +++ + ++ V KG+ ++H+N
Sbjct: 109 TLVNLHDAFEDDNEMVMIYEFMSGGELFEKVADEHNKMSEDEAVEYMRQVCKGLCHMHEN 168
Query: 410 NIIHRDLKAANLLMD---ENEVSLL 431
N +H DLK N++ NE+ L+
Sbjct: 169 NYVHLDLKPENIMFTTKRSNELKLI 193
>pdb|3MTL|A Chain A, Crystal Structure Of The Pctaire1 Kinase In Complex With
Ind E804
Length = 324
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 33/129 (25%), Positives = 63/129 (48%), Gaps = 4/129 (3%)
Query: 299 KVASGSYGDLYRGTYCSQD--VAIKVLKPERINSDMQKEFAQEVFIMRKVRHKNVVQFIG 356
K+ G+Y +Y+G D VA+K ++ E +EV +++ ++H N+V
Sbjct: 9 KLGEGTYATVYKGKSKLTDNLVALKEIRLEH-EEGAPCTAIREVSLLKDLKHANIVTLHD 67
Query: 357 ACTKPPSLCIVTEFMSGGSVYDYLHKLKGVFKLPSLLKVAIDVSKGMNYLHQNNIIHRDL 416
SL +V E++ + YL + + ++ + +G+ Y H+ ++HRDL
Sbjct: 68 IIHTEKSLTLVFEYLDK-DLKQYLDDCGNIINMHNVKLFLFQLLRGLAYCHRQKVLHRDL 126
Query: 417 KAANLLMDE 425
K NLL++E
Sbjct: 127 KPQNLLINE 135
>pdb|4EOI|A Chain A, Thr 160 Phosphorylated Cdk2 K89d, Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
pdb|4EOI|C Chain C, Thr 160 Phosphorylated Cdk2 K89d, Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
Length = 299
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 32/130 (24%), Positives = 67/130 (51%), Gaps = 6/130 (4%)
Query: 299 KVASGSYGDLY--RGTYCSQDVAIKVLKPERINSDMQKEFAQEVFIMRKVRHKNVVQFIG 356
K+ G+YG +Y R + VA+K ++ + + +E+ +++++ H N+V+ +
Sbjct: 10 KIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLD 69
Query: 357 ACTKPPSLCIVTEFMSGGSVYDYL--HKLKGVFKLPSLLKVAIDVSKGMNYLHQNNIIHR 414
L +V EF+ + D++ L G+ LP + + +G+ + H + ++HR
Sbjct: 70 VIHTENKLYLVFEFLHQ-DLKDFMDASALTGI-PLPLIKSYLFQLLQGLAFCHSHRVLHR 127
Query: 415 DLKAANLLMD 424
DLK NLL++
Sbjct: 128 DLKPENLLIN 137
>pdb|3UTO|A Chain A, Twitchin Kinase Region From C.Elegans
(Fn31-Nl-Kin-Crd-Ig26)
pdb|3UTO|B Chain B, Twitchin Kinase Region From C.Elegans
(Fn31-Nl-Kin-Crd-Ig26)
Length = 573
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 35/145 (24%), Positives = 69/145 (47%), Gaps = 9/145 (6%)
Query: 293 HLKFGSKVASGSYGDLYRGT--YCSQDVAIK-VLKPERINSDMQKEFAQEVFIMRKVRHK 349
H ++ +G++G ++R T + A K V+ P + + + +E+ M +RH
Sbjct: 158 HYDIHEELGTGAFGVVHRVTERATGNNFAAKFVMTPHESDKETVR---KEIQTMSVLRHP 214
Query: 350 NVVQFIGACTKPPSLCIVTEFMSGGSVYDYLHKLKGVFKLPSLLKVAIDVSKGMNYLHQN 409
+V A + ++ EFMSGG +++ + ++ V KG+ ++H+N
Sbjct: 215 TLVNLHDAFEDDNEMVMIYEFMSGGELFEKVADEHNKMSEDEAVEYMRQVCKGLCHMHEN 274
Query: 410 NIIHRDLKAANLLMD---ENEVSLL 431
N +H DLK N++ NE+ L+
Sbjct: 275 NYVHLDLKPENIMFTTKRSNELKLI 299
>pdb|2PUU|A Chain A, Crystal Structure Of P38 Complex With 1-(5-Tert-Butyl-2-P-
Tolyl-2h-Pyrazol-3-Yl)-3-[4-(6-Morpholin-4-Ylmethyl-
Pyridin-3-Yl)naphthalen-1-Yl]urea
pdb|3CTQ|A Chain A, Structure Of Map Kinase P38 In Complex With A
1-O-Tolyl-1,2, 3-Triazole-4-Carboxamide
Length = 348
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 41/154 (26%), Positives = 71/154 (46%), Gaps = 22/154 (14%)
Query: 286 VWEIDPKHLKFGSKVASGSYGDLYRG--TYCSQDVAIKVLKPERINSDMQKEFAQEVFIM 343
+WE+ P+ + S V SG+YG + T VA+K L + K +E+ ++
Sbjct: 13 IWEV-PERYQNLSPVGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLL 71
Query: 344 RKVRHKNVVQFIGACTKPPSL------CIVTEFMSGGSVYDYLHKLKGVFKLPSLLK--- 394
+ ++H+NV+ + T SL +VT M L + K L
Sbjct: 72 KHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGA--------DLNNIVKCAKLTDDHV 123
Query: 395 --VAIDVSKGMNYLHQNNIIHRDLKAANLLMDEN 426
+ + +G+ Y+H +IIHRDLK +NL ++E+
Sbjct: 124 QFLIYQILRGLKYIHSADIIHRDLKPSNLAVNED 157
>pdb|3LM0|A Chain A, Crystal Structure Of Human SerineTHREONINE KINASE 17B
(STK17B)
pdb|3LM5|A Chain A, Crystal Structure Of Human SerineTHREONINE KINASE 17B
(STK17B) IN Complex With Quercetin
Length = 327
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 29/110 (26%), Positives = 55/110 (50%), Gaps = 2/110 (1%)
Query: 316 QDVAIKVLKPERINSDMQKEFAQEVFIMRKVRH-KNVVQFIGACTKPPSLCIVTEFMSGG 374
Q+ A K LK R D + E E+ ++ + V+ + ++ E+ +GG
Sbjct: 55 QEYAAKFLKKRRRGQDCRAEILHEIAVLELAKSCPRVINLHEVYENTSEIILILEYAAGG 114
Query: 375 SVYDY-LHKLKGVFKLPSLLKVAIDVSKGMNYLHQNNIIHRDLKAANLLM 423
++ L +L + ++++ + +G+ YLHQNNI+H DLK N+L+
Sbjct: 115 EIFSLCLPELAEMVSENDVIRLIKQILEGVYYLHQNNIVHLDLKPQNILL 164
>pdb|1BMK|A Chain A, The Complex Structure Of The Map Kinase P38SB218655
pdb|1P38|A Chain A, The Structure Of The Map Kinase P38 At 2.1 Angstoms
Resolution
Length = 379
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 41/154 (26%), Positives = 71/154 (46%), Gaps = 22/154 (14%)
Query: 286 VWEIDPKHLKFGSKVASGSYGDLYRG--TYCSQDVAIKVLKPERINSDMQKEFAQEVFIM 343
+WE+ P+ + S V SG+YG + T VA+K L + K +E+ ++
Sbjct: 36 IWEV-PERYQNLSPVGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLL 94
Query: 344 RKVRHKNVVQFIGACTKPPSL------CIVTEFMSGGSVYDYLHKLKGVFKLPSLLK--- 394
+ ++H+NV+ + T SL +VT M L + K L
Sbjct: 95 KHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGA--------DLNNIVKCQKLTDDHV 146
Query: 395 --VAIDVSKGMNYLHQNNIIHRDLKAANLLMDEN 426
+ + +G+ Y+H +IIHRDLK +NL ++E+
Sbjct: 147 QFLIYQILRGLKYIHSADIIHRDLKPSNLAVNED 180
>pdb|3GI3|A Chain A, Crystal Structure Of A N-Phenyl-N'-Naphthylurea Analog In
Complex With P38 Map Kinase
Length = 360
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 41/154 (26%), Positives = 71/154 (46%), Gaps = 22/154 (14%)
Query: 286 VWEIDPKHLKFGSKVASGSYGDLYRG--TYCSQDVAIKVLKPERINSDMQKEFAQEVFIM 343
+WE+ P+ + S V SG+YG + T VA+K L + K +E+ ++
Sbjct: 17 IWEV-PERYQNLSPVGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLL 75
Query: 344 RKVRHKNVVQFIGACTKPPSL------CIVTEFMSGGSVYDYLHKLKGVFKLPSLLK--- 394
+ ++H+NV+ + T SL +VT M L + K L
Sbjct: 76 KHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGAD--------LNNIVKCQKLTDDHV 127
Query: 395 --VAIDVSKGMNYLHQNNIIHRDLKAANLLMDEN 426
+ + +G+ Y+H +IIHRDLK +NL ++E+
Sbjct: 128 QFLIYQILRGLKYIHSADIIHRDLKPSNLAVNED 161
>pdb|3COK|A Chain A, Crystal Structure Of Plk4 Kinase
pdb|3COK|B Chain B, Crystal Structure Of Plk4 Kinase
Length = 278
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 36/136 (26%), Positives = 61/136 (44%), Gaps = 3/136 (2%)
Query: 294 LKFGSKVASGSYGDLYRG--TYCSQDVAIKVL-KPERINSDMQKEFAQEVFIMRKVRHKN 350
K G+ + GS+ +YR + +VAIK++ K + M + EV I +++H +
Sbjct: 13 FKVGNLLGKGSFAGVYRAESIHTGLEVAIKMIDKKAMYKAGMVQRVQNEVKIHCQLKHPS 72
Query: 351 VVQFIGACTKPPSLCIVTEFMSGGSVYDYLHKLKGVFKLPSLLKVAIDVSKGMNYLHQNN 410
+++ + +V E G + YL F + GM YLH +
Sbjct: 73 ILELYNYFEDSNYVYLVLEMCHNGEMNRYLKNRVKPFSENEARHFMHQIITGMLYLHSHG 132
Query: 411 IIHRDLKAANLLMDEN 426
I+HRDL +NLL+ N
Sbjct: 133 ILHRDLTLSNLLLTRN 148
>pdb|1LEW|A Chain A, Crystal Structure Of Map Kinase P38 Complexed To The
Docking Site On Its Nuclear Substrate Mef2a
pdb|1LEZ|A Chain A, Crystal Structure Of Map Kinase P38 Complexed To The
Docking Site On Its Activator Mkk3b
Length = 360
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 41/154 (26%), Positives = 71/154 (46%), Gaps = 22/154 (14%)
Query: 286 VWEIDPKHLKFGSKVASGSYGDLYRG--TYCSQDVAIKVLKPERINSDMQKEFAQEVFIM 343
+WE+ P+ + S V SG+YG + T VA+K L + K +E+ ++
Sbjct: 17 IWEV-PERYQNLSPVGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLL 75
Query: 344 RKVRHKNVVQFIGACTKPPSL------CIVTEFMSGGSVYDYLHKLKGVFKLPSLLK--- 394
+ ++H+NV+ + T SL +VT M L + K L
Sbjct: 76 KHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGA--------DLNNIVKCQKLTDDHV 127
Query: 395 --VAIDVSKGMNYLHQNNIIHRDLKAANLLMDEN 426
+ + +G+ Y+H +IIHRDLK +NL ++E+
Sbjct: 128 QFLIYQILRGLKYIHSADIIHRDLKPSNLAVNED 161
>pdb|3PY3|A Chain A, Crystal Structure Of Phosphorylated P38alpha Map Kinase
Length = 380
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 41/154 (26%), Positives = 71/154 (46%), Gaps = 22/154 (14%)
Query: 286 VWEIDPKHLKFGSKVASGSYGDLYRG--TYCSQDVAIKVLKPERINSDMQKEFAQEVFIM 343
+WE+ P+ + S V SG+YG + T VA+K L + K +E+ ++
Sbjct: 37 IWEV-PERYQNLSPVGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLL 95
Query: 344 RKVRHKNVVQFIGACTKPPSL------CIVTEFMSGGSVYDYLHKLKGVFKLPSLLK--- 394
+ ++H+NV+ + T SL +VT M L + K L
Sbjct: 96 KHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGA--------DLNNIVKCQKLTDDHV 147
Query: 395 --VAIDVSKGMNYLHQNNIIHRDLKAANLLMDEN 426
+ + +G+ Y+H +IIHRDLK +NL ++E+
Sbjct: 148 QFLIYQILRGLKYIHSADIIHRDLKPSNLAVNED 181
>pdb|3TG1|A Chain A, Crystal Structure Of P38alpha In Complex With A Mapk
Docking Partner
Length = 380
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 41/154 (26%), Positives = 71/154 (46%), Gaps = 22/154 (14%)
Query: 286 VWEIDPKHLKFGSKVASGSYGDLYRG--TYCSQDVAIKVLKPERINSDMQKEFAQEVFIM 343
+WE+ P+ + S V SG+YG + T VA+K L + K +E+ ++
Sbjct: 37 IWEV-PERYQNLSPVGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLL 95
Query: 344 RKVRHKNVVQFIGACTKPPSL------CIVTEFMSGGSVYDYLHKLKGVFKLPSLLK--- 394
+ ++H+NV+ + T SL +VT M L + K L
Sbjct: 96 KHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGA--------DLNNIVKCQKLTDDHV 147
Query: 395 --VAIDVSKGMNYLHQNNIIHRDLKAANLLMDEN 426
+ + +G+ Y+H +IIHRDLK +NL ++E+
Sbjct: 148 QFLIYQILRGLKYIHSADIIHRDLKPSNLAVNED 181
>pdb|2GTM|A Chain A, Mutated Mouse P38 Map Kinase Domain In Complex With
Inhibitor Pg-892579
pdb|2GTN|A Chain A, Mutated Map Kinase P38 (mus Musculus) In Complex With
Inhbitor Pg-951717
Length = 348
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 41/154 (26%), Positives = 71/154 (46%), Gaps = 22/154 (14%)
Query: 286 VWEIDPKHLKFGSKVASGSYGDLYRG--TYCSQDVAIKVLKPERINSDMQKEFAQEVFIM 343
+WE+ P+ + S V SG+YG + T VA+K L + K +E+ ++
Sbjct: 13 IWEV-PERYQNLSPVGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLL 71
Query: 344 RKVRHKNVVQFIGACTKPPSL------CIVTEFMSGGSVYDYLHKLKGVFKLPSLLK--- 394
+ ++H+NV+ + T SL +VT M L + K L
Sbjct: 72 KHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGA--------DLNNIVKCQKLTDDHV 123
Query: 395 --VAIDVSKGMNYLHQNNIIHRDLKAANLLMDEN 426
+ + +G+ Y+H +IIHRDLK +NL ++E+
Sbjct: 124 QFLIYQILRGLKYIHSADIIHRDLKPSNLAVNED 157
>pdb|1YWR|A Chain A, Crystal Structure Analysis Of Inactive P38 Kinase Domain
In Complex With A Monocyclic Pyrazolone Inhibitor
Length = 360
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 41/154 (26%), Positives = 71/154 (46%), Gaps = 22/154 (14%)
Query: 286 VWEIDPKHLKFGSKVASGSYGDLYRG--TYCSQDVAIKVLKPERINSDMQKEFAQEVFIM 343
+WE+ P+ + S V SG+YG + T VA+K L + K +E+ ++
Sbjct: 17 IWEV-PERYQNLSPVGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLL 75
Query: 344 RKVRHKNVVQFIGACTKPPSL------CIVTEFMSGGSVYDYLHKLKGVFKLPSLLK--- 394
+ ++H+NV+ + T SL +VT M L + K L
Sbjct: 76 KHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGA--------DLNNIVKCQKLTDDHV 127
Query: 395 --VAIDVSKGMNYLHQNNIIHRDLKAANLLMDEN 426
+ + +G+ Y+H +IIHRDLK +NL ++E+
Sbjct: 128 QFLIYQILRGLKYIHSADIIHRDLKPSNLAVNED 161
>pdb|1YW2|A Chain A, Mutated Mus Musculus P38 Kinase (Mp38)
Length = 360
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 41/154 (26%), Positives = 71/154 (46%), Gaps = 22/154 (14%)
Query: 286 VWEIDPKHLKFGSKVASGSYGDLYRG--TYCSQDVAIKVLKPERINSDMQKEFAQEVFIM 343
+WE+ P+ + S V SG+YG + T VA+K L + K +E+ ++
Sbjct: 17 IWEV-PERYQNLSPVGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLL 75
Query: 344 RKVRHKNVVQFIGACTKPPSL------CIVTEFMSGGSVYDYLHKLKGVFKLPSLLK--- 394
+ ++H+NV+ + T SL +VT M L + K L
Sbjct: 76 KHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGA--------DLNNIVKCQKLTDDHV 127
Query: 395 --VAIDVSKGMNYLHQNNIIHRDLKAANLLMDEN 426
+ + +G+ Y+H +IIHRDLK +NL ++E+
Sbjct: 128 QFLIYQILRGLKYIHSADIIHRDLKPSNLAVNED 161
>pdb|2GHL|A Chain A, Mutant Mus Musculus P38 Kinase Domain In Complex With
Inhibitor Pg-874743
pdb|2GHM|A Chain A, Mutated Map Kinase P38 (Mus Musculus) In Complex With
Inhbitor Pg-895449
Length = 348
Score = 50.8 bits (120), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 41/154 (26%), Positives = 71/154 (46%), Gaps = 22/154 (14%)
Query: 286 VWEIDPKHLKFGSKVASGSYGDLYRG--TYCSQDVAIKVLKPERINSDMQKEFAQEVFIM 343
+WE+ P+ + S V SG+YG + T VA+K L + K +E+ ++
Sbjct: 13 IWEV-PERYQNLSPVGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLL 71
Query: 344 RKVRHKNVVQFIGACTKPPSL------CIVTEFMSGGSVYDYLHKLKGVFKLPSLLK--- 394
+ ++H+NV+ + T SL +VT M L + K L
Sbjct: 72 KHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGA--------DLNNIVKCQKLTDDHV 123
Query: 395 --VAIDVSKGMNYLHQNNIIHRDLKAANLLMDEN 426
+ + +G+ Y+H +IIHRDLK +NL ++E+
Sbjct: 124 QFLIYQILRGLKYIHSADIIHRDLKPSNLAVNED 157
>pdb|3ZH8|A Chain A, A Novel Small Molecule Apkc Inhibitor
pdb|3ZH8|B Chain B, A Novel Small Molecule Apkc Inhibitor
pdb|3ZH8|C Chain C, A Novel Small Molecule Apkc Inhibitor
Length = 349
Score = 50.8 bits (120), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 38/131 (29%), Positives = 68/131 (51%), Gaps = 9/131 (6%)
Query: 300 VASGSYGD--LYRGTYCSQDVAIKVLKPERINSDMQKEFAQ-EVFIMRKVRHKNVVQFIG 356
+ GSY L R + A+KV+K E +N D ++ Q E + + + + +
Sbjct: 13 IGRGSYAKVLLVRLKKTDRIYAMKVVKKELVNDDEDIDWVQTEKHVFEQASNHPFLVGLH 72
Query: 357 ACTKPPS-LCIVTEFMSGGSVYDYLHKLKGVFKLPS--LLKVAIDVSKGMNYLHQNNIIH 413
+C + S L V E+++GG + ++ + + KLP + ++S +NYLH+ II+
Sbjct: 73 SCFQTESRLFFVIEYVNGGDLMFHMQRQR---KLPEEHARFYSAEISLALNYLHERGIIY 129
Query: 414 RDLKAANLLMD 424
RDLK N+L+D
Sbjct: 130 RDLKLDNVLLD 140
>pdb|3GCP|A Chain A, Human P38 Map Kinase In Complex With Sb203580
pdb|3GCQ|A Chain A, Human P38 Map Kinase In Complex With Rl45
pdb|3GCS|A Chain A, Human P38 Map Kinase In Complex With Sorafenib
pdb|3GCV|A Chain A, Human P38 Map Kinase In Complex With Rl62
pdb|3HV3|A Chain A, Human P38 Map Kinase In Complex With Rl49
pdb|3IW5|A Chain A, Human P38 Map Kinase In Complex With An Indole Derivative
pdb|3IW6|A Chain A, Human P38 Map Kinase In Complex With A Benzylpiperazin-
Pyrrol
pdb|3IW7|A Chain A, Human P38 Map Kinase In Complex With An Imidazo-Pyridine
pdb|3IW8|A Chain A, Structure Of Inactive Human P38 Map Kinase In Complex With
A Thiazole-Urea
pdb|3HUB|A Chain A, Human P38 Map Kinase In Complex With Scios-469
pdb|3L8S|A Chain A, Human P38 Map Kinase In Complex With Cp-547632
pdb|3LFB|A Chain A, Human P38 Map Kinase In Complex With Rl98
pdb|3LFC|A Chain A, Human P38 Map Kinase In Complex With Rl99
pdb|3LFD|A Chain A, Human P38 Map Kinase In Complex With Rl113
pdb|3LFE|A Chain A, Human P38 Map Kinase In Complex With Rl116
pdb|3LFF|A Chain A, Human P38 Map Kinase In Complex With Rl166
pdb|3PG3|A Chain A, Human P38 Map Kinase In Complex With Rl182
Length = 360
Score = 50.8 bits (120), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 46/168 (27%), Positives = 78/168 (46%), Gaps = 24/168 (14%)
Query: 286 VWEIDPKHLKFGSKVASGSYGDLYRG--TYCSQDVAIKVLKPERINSDMQKEFAQEVFIM 343
+WE+ P+ + S V SG+YG + T VA+K L + K +E+ ++
Sbjct: 17 IWEV-PERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLL 75
Query: 344 RKVRHKNVVQFIGACTKPPSL------CIVTEFMSGGSVYDYLHKLKGVFKLPSLLK--- 394
+ ++H+NV+ + T SL +VT M L + K L
Sbjct: 76 KHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGA--------DLNNIVKSQKLTDDHV 127
Query: 395 --VAIDVSKGMNYLHQNNIIHRDLKAANLLMDEN-EVSLL-LSLCLFT 438
+ + +G+ Y+H +IIHRDLK +NL ++E+ E+ +L LC T
Sbjct: 128 QFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDSELKILDFGLCRHT 175
>pdb|3A8W|A Chain A, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8W|B Chain B, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8X|A Chain A, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8X|B Chain B, Crystal Structure Of Pkciota Kinase Domain
Length = 345
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 38/131 (29%), Positives = 68/131 (51%), Gaps = 9/131 (6%)
Query: 300 VASGSYGD--LYRGTYCSQDVAIKVLKPERINSDMQKEFAQ-EVFIMRKVRHKNVVQFIG 356
+ GSY L R + A+KV+K E +N D ++ Q E + + + + +
Sbjct: 17 IGRGSYAKVLLVRLKKTDRIYAMKVVKKELVNDDEDIDWVQTEKHVFEQASNHPFLVGLH 76
Query: 357 ACTKPPS-LCIVTEFMSGGSVYDYLHKLKGVFKLPS--LLKVAIDVSKGMNYLHQNNIIH 413
+C + S L V E+++GG + ++ + + KLP + ++S +NYLH+ II+
Sbjct: 77 SCFQTESRLFFVIEYVNGGDLMFHMQRQR---KLPEEHARFYSAEISLALNYLHERGIIY 133
Query: 414 RDLKAANLLMD 424
RDLK N+L+D
Sbjct: 134 RDLKLDNVLLD 144
>pdb|1ZRZ|A Chain A, Crystal Structure Of The Catalytic Domain Of Atypical
Protein Kinase C-Iota
Length = 364
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 38/131 (29%), Positives = 68/131 (51%), Gaps = 9/131 (6%)
Query: 300 VASGSYGD--LYRGTYCSQDVAIKVLKPERINSDMQKEFAQ-EVFIMRKVRHKNVVQFIG 356
+ GSY L R + A+KV+K E +N D ++ Q E + + + + +
Sbjct: 28 IGRGSYAKVLLVRLKKTDRIYAMKVVKKELVNDDEDIDWVQTEKHVFEQASNHPFLVGLH 87
Query: 357 ACTKPPS-LCIVTEFMSGGSVYDYLHKLKGVFKLPS--LLKVAIDVSKGMNYLHQNNIIH 413
+C + S L V E+++GG + ++ + + KLP + ++S +NYLH+ II+
Sbjct: 88 SCFQTESRLFFVIEYVNGGDLMFHMQRQR---KLPEEHARFYSAEISLALNYLHERGIIY 144
Query: 414 RDLKAANLLMD 424
RDLK N+L+D
Sbjct: 145 RDLKLDNVLLD 155
>pdb|2X4F|A Chain A, The Crystal Structure Of The Human Myosin Light Chain
Kinase Loc340156.
pdb|2X4F|B Chain B, The Crystal Structure Of The Human Myosin Light Chain
Kinase Loc340156
Length = 373
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 30/127 (23%), Positives = 64/127 (50%), Gaps = 8/127 (6%)
Query: 300 VASGSYGDLYRG--TYCSQDVAIKVLKPERINSDMQKEFAQEVFIMRKVRHKNVVQFIGA 357
+ G +G +++ T +A K++K + ++E E+ +M ++ H N++Q A
Sbjct: 97 LGGGRFGQVHKCEETATGLKLAAKIIKTRGMKD--KEEVKNEISVMNQLDHANLIQLYDA 154
Query: 358 CTKPPSLCIVTEFMSGGSVYDYLHKLKGVFKLPSLLKVAI--DVSKGMNYLHQNNIIHRD 415
+ +V E++ GG ++D + + + L L + + +G+ ++HQ I+H D
Sbjct: 155 FESKNDIVLVMEYVDGGELFDRI--IDESYNLTELDTILFMKQICEGIRHMHQMYILHLD 212
Query: 416 LKAANLL 422
LK N+L
Sbjct: 213 LKPENIL 219
>pdb|4EOM|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With Atp
pdb|4EOM|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With Atp
Length = 301
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 32/129 (24%), Positives = 65/129 (50%), Gaps = 4/129 (3%)
Query: 299 KVASGSYGDLY--RGTYCSQDVAIKVLKPERINSDMQKEFAQEVFIMRKVRHKNVVQFIG 356
K+ G+YG +Y R + VA+K ++ + + +E+ +++++ H N+V+ +
Sbjct: 13 KIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLD 72
Query: 357 ACTKPPSLCIVTEFMSGG-SVYDYLHKLKGVFKLPSLLKVAIDVSKGMNYLHQNNIIHRD 415
L +V EF+S + L G+ LP + + +G+ + H + ++HRD
Sbjct: 73 VIHTENKLYLVFEFLSMDLKKFMDASALTGI-PLPLIKSYLFQLLQGLAFCHSHRVLHRD 131
Query: 416 LKAANLLMD 424
LK NLL++
Sbjct: 132 LKPENLLIN 140
>pdb|4EON|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With The Inhibitor Ro3306
pdb|4EON|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With The Inhibitor Ro3306
Length = 300
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 32/129 (24%), Positives = 65/129 (50%), Gaps = 4/129 (3%)
Query: 299 KVASGSYGDLY--RGTYCSQDVAIKVLKPERINSDMQKEFAQEVFIMRKVRHKNVVQFIG 356
K+ G+YG +Y R + VA+K ++ + + +E+ +++++ H N+V+ +
Sbjct: 11 KIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLD 70
Query: 357 ACTKPPSLCIVTEFMSGG-SVYDYLHKLKGVFKLPSLLKVAIDVSKGMNYLHQNNIIHRD 415
L +V EF+S + L G+ LP + + +G+ + H + ++HRD
Sbjct: 71 VIHTENKLYLVFEFLSMDLKKFMDASALTGI-PLPLIKSYLFQLLQGLAFCHSHRVLHRD 129
Query: 416 LKAANLLMD 424
LK NLL++
Sbjct: 130 LKPENLLIN 138
>pdb|2Y4I|C Chain C, Ksr2-Mek1 Heterodimer
Length = 395
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 42/145 (28%), Positives = 75/145 (51%), Gaps = 6/145 (4%)
Query: 298 SKVASGSYGDLYRGTY-CSQDVAIKVLKPERINSDMQKEFAQEVFIMRKVRHKNVVQFIG 356
S++ +G+ G +++ ++ S V + L I ++ + +E+ ++ + +V F G
Sbjct: 74 SELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSPYIVGFYG 133
Query: 357 ACTKPPSLCIVTEFMSGGSVYDYLHKLKGVFKLPSLLKVAIDVSKGMNYLHQ-NNIIHRD 415
A + I E M GGS+ D + K G L KV+I V KG+ YL + + I+HRD
Sbjct: 134 AFYSDGEISICMEHMDGGSL-DQVLKKAGRIPEQILGKVSIAVIKGLTYLREKHKIMHRD 192
Query: 416 LKAANLLMDENEVSLLLSLCLFTVS 440
+K +N+L++ + LC F VS
Sbjct: 193 VKPSNILVNSRGE---IKLCDFGVS 214
>pdb|3ORN|A Chain A, Mitogen-Activated Protein Kinase Kinase 1 (Mek1) In
Complex With Ch4987655 And Mgamp-Pnp
pdb|3OS3|A Chain A, Mitogen-Activated Protein Kinase Kinase 1 (Mek1) In
Complex With Ch4858061 And Mgatp
Length = 307
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 42/145 (28%), Positives = 75/145 (51%), Gaps = 6/145 (4%)
Query: 298 SKVASGSYGDLYRGTY-CSQDVAIKVLKPERINSDMQKEFAQEVFIMRKVRHKNVVQFIG 356
S++ +G+ G +++ ++ S V + L I ++ + +E+ ++ + +V F G
Sbjct: 12 SELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSPYIVGFYG 71
Query: 357 ACTKPPSLCIVTEFMSGGSVYDYLHKLKGVFKLPSLLKVAIDVSKGMNYLHQ-NNIIHRD 415
A + I E M GGS+ D + K G L KV+I V KG+ YL + + I+HRD
Sbjct: 72 AFYSDGEISICMEHMDGGSL-DQVLKKAGRIPEQILGKVSIAVIKGLTYLREKHKIMHRD 130
Query: 416 LKAANLLMDENEVSLLLSLCLFTVS 440
+K +N+L++ + LC F VS
Sbjct: 131 VKPSNILVNSRGE---IKLCDFGVS 152
>pdb|1O6L|A Chain A, Crystal Structure Of An Activated Akt/protein Kinase B
(pkb-pif Chimera) Ternary Complex With Amp-pnp And Gsk3
Peptide
Length = 337
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 32/130 (24%), Positives = 62/130 (47%), Gaps = 4/130 (3%)
Query: 300 VASGSYGD--LYRGTYCSQDVAIKVLKPERI-NSDMQKEFAQEVFIMRKVRHKNVVQFIG 356
+ G++G L R + A+K+L+ E I D E +++ RH +
Sbjct: 13 LGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRHPFLTALKY 72
Query: 357 ACTKPPSLCIVTEFMSGGSVYDYLHKLKGVFKLPSLLKVAIDVSKGMNYLHQNNIIHRDL 416
A LC V E+ +GG ++ +L + + VF ++ + YLH ++++RD+
Sbjct: 73 AFQTHDRLCFVMEYANGGELFFHLSRER-VFTEERARFYGAEIVSALEYLHSRDVVYRDI 131
Query: 417 KAANLLMDEN 426
K NL++D++
Sbjct: 132 KLENLMLDKD 141
>pdb|4AN2|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4AN3|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4AN9|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4ANB|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs
Length = 301
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 42/145 (28%), Positives = 75/145 (51%), Gaps = 6/145 (4%)
Query: 298 SKVASGSYGDLYRGTY-CSQDVAIKVLKPERINSDMQKEFAQEVFIMRKVRHKNVVQFIG 356
S++ +G+ G +++ ++ S V + L I ++ + +E+ ++ + +V F G
Sbjct: 15 SELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSPYIVGFYG 74
Query: 357 ACTKPPSLCIVTEFMSGGSVYDYLHKLKGVFKLPSLLKVAIDVSKGMNYLHQ-NNIIHRD 415
A + I E M GGS+ D + K G L KV+I V KG+ YL + + I+HRD
Sbjct: 75 AFYSDGEISICMEHMDGGSL-DQVLKKAGRIPEQILGKVSIAVIKGLTYLREKHKIMHRD 133
Query: 416 LKAANLLMDENEVSLLLSLCLFTVS 440
+K +N+L++ + LC F VS
Sbjct: 134 VKPSNILVNSRGE---IKLCDFGVS 155
>pdb|1MRV|A Chain A, Crystal Structure Of An Inactive Akt2 Kinase Domain
pdb|1MRY|A Chain A, Crystal Structure Of An Inactive Akt2 Kinase Domain
Length = 339
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 32/130 (24%), Positives = 62/130 (47%), Gaps = 4/130 (3%)
Query: 300 VASGSYGD--LYRGTYCSQDVAIKVLKPERI-NSDMQKEFAQEVFIMRKVRHKNVVQFIG 356
+ G++G L R + A+K+L+ E I D E +++ RH +
Sbjct: 16 LGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRHPFLTALKY 75
Query: 357 ACTKPPSLCIVTEFMSGGSVYDYLHKLKGVFKLPSLLKVAIDVSKGMNYLHQNNIIHRDL 416
A LC V E+ +GG ++ +L + + VF ++ + YLH ++++RD+
Sbjct: 76 AFQTHDRLCFVMEYANGGELFFHLSRER-VFTEERARFYGAEIVSALEYLHSRDVVYRDI 134
Query: 417 KAANLLMDEN 426
K NL++D++
Sbjct: 135 KLENLMLDKD 144
>pdb|1O6K|A Chain A, Structure Of Activated Form Of Pkb Kinase Domain S474d
With Gsk3 Peptide And Amp-Pnp
Length = 336
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 32/130 (24%), Positives = 62/130 (47%), Gaps = 4/130 (3%)
Query: 300 VASGSYGD--LYRGTYCSQDVAIKVLKPERI-NSDMQKEFAQEVFIMRKVRHKNVVQFIG 356
+ G++G L R + A+K+L+ E I D E +++ RH +
Sbjct: 13 LGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRHPFLTALKY 72
Query: 357 ACTKPPSLCIVTEFMSGGSVYDYLHKLKGVFKLPSLLKVAIDVSKGMNYLHQNNIIHRDL 416
A LC V E+ +GG ++ +L + + VF ++ + YLH ++++RD+
Sbjct: 73 AFQTHDRLCFVMEYANGGELFFHLSRER-VFTEERARFYGAEIVSALEYLHSRDVVYRDI 131
Query: 417 KAANLLMDEN 426
K NL++D++
Sbjct: 132 KLENLMLDKD 141
>pdb|3NIZ|A Chain A, Cryptosporidium Parvum Cyclin-Dependent Kinase Cgd5_2510
With Adp Bound
Length = 311
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 35/133 (26%), Positives = 67/133 (50%), Gaps = 10/133 (7%)
Query: 299 KVASGSYGDLYRGTYCSQDVAIKVLKPERINSDMQKE-----FAQEVFIMRKVRHKNVVQ 353
KV G+YG +Y+ ++D +++ +RI D + E +E+ +++++ H N+V
Sbjct: 28 KVGEGTYGVVYK----AKDSQGRIVALKRIRLDAEDEGIPSTAIREISLLKELHHPNIVS 83
Query: 354 FIGACTKPPSLCIVTEFMSGGSVYDYLHKLKGVFKLPSLLKVAIDVSKGMNYLHQNNIIH 413
I L +V EFM + L + K + + + +G+ + HQ+ I+H
Sbjct: 84 LIDVIHSERCLTLVFEFMEK-DLKKVLDENKTGLQDSQIKIYLYQLLRGVAHCHQHRILH 142
Query: 414 RDLKAANLLMDEN 426
RDLK NLL++ +
Sbjct: 143 RDLKPQNLLINSD 155
>pdb|1OVE|A Chain A, The Structure Of P38 Alpha In Complex With A
Dihydroquinolinone
pdb|1R3C|A Chain A, The Structure Of P38alpha C162s Mutant
pdb|2I0H|A Chain A, The Structure Of P38alpha In Complex With An
Arylpyridazinone
pdb|3GC7|A Chain A, The Structure Of P38alpha In Complex With A
Dihydroquinazolinone
pdb|3NEW|A Chain A, P38-Alpha Complexed With Compound 10
Length = 366
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 41/154 (26%), Positives = 71/154 (46%), Gaps = 22/154 (14%)
Query: 286 VWEIDPKHLKFGSKVASGSYGDLYRG--TYCSQDVAIKVLKPERINSDMQKEFAQEVFIM 343
+WE+ P+ + S V SG+YG + T VA+K L + K +E+ ++
Sbjct: 23 IWEV-PERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLL 81
Query: 344 RKVRHKNVVQFIGACTKPPSL------CIVTEFMSGGSVYDYLHKLKGVFKLPSLLK--- 394
+ ++H+NV+ + T SL +VT M L + K L
Sbjct: 82 KHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGA--------DLNNIVKCQKLTDDHV 133
Query: 395 --VAIDVSKGMNYLHQNNIIHRDLKAANLLMDEN 426
+ + +G+ Y+H +IIHRDLK +NL ++E+
Sbjct: 134 QFLIYQILRGLKYIHSADIIHRDLKPSNLAVNED 167
>pdb|3FI4|A Chain A, P38 Kinase Crystal Structure In Complex With Ro4499
pdb|3FKO|A Chain A, P38 Kinase Crystal Structure In Complex With Ro3668
pdb|3FLN|C Chain C, P38 Kinase Crystal Structure In Complex With R1487
Length = 372
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 41/154 (26%), Positives = 71/154 (46%), Gaps = 22/154 (14%)
Query: 286 VWEIDPKHLKFGSKVASGSYGDLYRG--TYCSQDVAIKVLKPERINSDMQKEFAQEVFIM 343
+WE+ P+ + S V SG+YG + T VA+K L + K +E+ ++
Sbjct: 29 IWEV-PERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSKPFQSIIHAKRTYRELRLL 87
Query: 344 RKVRHKNVVQFIGACTKPPSL------CIVTEFMSGGSVYDYLHKLKGVFKLPSLLK--- 394
+ ++H+NV+ + T SL +VT M L + K L
Sbjct: 88 KHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGA--------DLNNIVKCQKLTDDHV 139
Query: 395 --VAIDVSKGMNYLHQNNIIHRDLKAANLLMDEN 426
+ + +G+ Y+H +IIHRDLK +NL ++E+
Sbjct: 140 QFLIYQILRGLKYIHSADIIHRDLKPSNLAVNED 173
>pdb|2JDO|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With
Isoquinoline-5- Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl) Amide
pdb|2JDR|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With The Inhibitor
A- 443654
pdb|2UW9|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With 4-(4-Chloro-
Phenyl)-4-(4-(1h-Pyrazol-4-Yl)-Phenyl)-Piperidine
pdb|2X39|A Chain A, Structure Of
4-Amino-N-(4-Chlorobenzyl)-1-(7h-Pyrrolo(2,3-D)
Pyrimidin-4-Yl)piperidine-4-Carboxamide Bound To Pkb
pdb|2XH5|A Chain A, Structure Of 4-(4-Tert-Butylbenzyl)-1-(7h-Pyrrolo(2,3-D)
Pyrimidin-4-Yl)piperidin-4-Amine Bound To Pkb
Length = 342
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 32/130 (24%), Positives = 62/130 (47%), Gaps = 4/130 (3%)
Query: 300 VASGSYGD--LYRGTYCSQDVAIKVLKPERI-NSDMQKEFAQEVFIMRKVRHKNVVQFIG 356
+ G++G L R + A+K+L+ E I D E +++ RH +
Sbjct: 18 LGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRHPFLTALKY 77
Query: 357 ACTKPPSLCIVTEFMSGGSVYDYLHKLKGVFKLPSLLKVAIDVSKGMNYLHQNNIIHRDL 416
A LC V E+ +GG ++ +L + + VF ++ + YLH ++++RD+
Sbjct: 78 AFQTHDRLCFVMEYANGGELFFHLSRER-VFTEERARFYGAEIVSALEYLHSRDVVYRDI 136
Query: 417 KAANLLMDEN 426
K NL++D++
Sbjct: 137 KLENLMLDKD 146
>pdb|1IAN|A Chain A, Human P38 Map Kinase Inhibitor Complex
pdb|2QD9|A Chain A, P38 Alpha Map Kinase Inhibitor Based On Heterobicyclic
Scaffolds
pdb|2RG5|A Chain A, Phenylalanine Pyrrolotriazine P38 Alpha Map Kinase
Inhibitor Compound 11b
pdb|2RG6|A Chain A, Phenylalanine Pyrrolotriazine P38 Alpha Map Kinase
Inhibitor Compound 11j
pdb|3C5U|A Chain A, P38 Alpha Map Kinase Complexed With A Benzothiazole Based
Inhibitor
pdb|3BV2|A Chain A, Morpholino Pyrrolotriazine P38 Alpha Map Kinase Inhibitor
Compound 30
pdb|3BV3|A Chain A, Morpholino Pyrrolotriazine P38 Alpha Map Kinase Inhibitor
Compound 2
pdb|3BX5|A Chain A, P38 Alpha Map Kinase Complexed With Bms-640994
pdb|3L8X|A Chain A, P38 Alpha Kinase Complexed With A Pyrazolo-Pyrimidine
Based Inhibitor
pdb|3NWW|A Chain A, P38 Alpha Kinase Complexed With A
2-Aminothiazol-5-Yl-Pyrimidine Based Inhibitor
pdb|3MVL|A Chain A, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7k
pdb|3MVL|B Chain B, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7k
pdb|3MVM|A Chain A, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7v
pdb|3MVM|B Chain B, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7v
pdb|3OCG|A Chain A, P38 Alpha Kinase Complexed With A 5-Amino-Pyrazole Based
Inhibitor
pdb|3S4Q|A Chain A, P38 Alpha Kinase Complexed With A Pyrazolo-Triazine Based
Inhibitor
Length = 366
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 41/154 (26%), Positives = 71/154 (46%), Gaps = 22/154 (14%)
Query: 286 VWEIDPKHLKFGSKVASGSYGDLYRG--TYCSQDVAIKVLKPERINSDMQKEFAQEVFIM 343
+WE+ P+ + S V SG+YG + T VA+K L + K +E+ ++
Sbjct: 23 IWEV-PERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLL 81
Query: 344 RKVRHKNVVQFIGACTKPPSL------CIVTEFMSGGSVYDYLHKLKGVFKLPSLLK--- 394
+ ++H+NV+ + T SL +VT M L + K L
Sbjct: 82 KHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGAD--------LNNIVKCQKLTDDHV 133
Query: 395 --VAIDVSKGMNYLHQNNIIHRDLKAANLLMDEN 426
+ + +G+ Y+H +IIHRDLK +NL ++E+
Sbjct: 134 QFLIYQILRGLKYIHSADIIHRDLKPSNLAVNED 167
>pdb|2QKR|A Chain A, Cryptosporidium Parvum Cyclin-Dependent Kinase Cgd5_2510
With Indirubin 3'-Monoxime Bound
Length = 313
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 35/133 (26%), Positives = 67/133 (50%), Gaps = 10/133 (7%)
Query: 299 KVASGSYGDLYRGTYCSQDVAIKVLKPERINSDMQKE-----FAQEVFIMRKVRHKNVVQ 353
KV G+YG +Y+ ++D +++ +RI D + E +E+ +++++ H N+V
Sbjct: 28 KVGEGTYGVVYK----AKDSQGRIVALKRIRLDAEDEGIPSTAIREISLLKELHHPNIVS 83
Query: 354 FIGACTKPPSLCIVTEFMSGGSVYDYLHKLKGVFKLPSLLKVAIDVSKGMNYLHQNNIIH 413
I L +V EFM + L + K + + + +G+ + HQ+ I+H
Sbjct: 84 LIDVIHSERCLTLVFEFMEK-DLKKVLDENKTGLQDSQIKIYLYQLLRGVAHCHQHRILH 142
Query: 414 RDLKAANLLMDEN 426
RDLK NLL++ +
Sbjct: 143 RDLKPQNLLINSD 155
>pdb|1GZN|A Chain A, Structure Of Pkb Kinase Domain
Length = 335
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 32/130 (24%), Positives = 62/130 (47%), Gaps = 4/130 (3%)
Query: 300 VASGSYGD--LYRGTYCSQDVAIKVLKPERI-NSDMQKEFAQEVFIMRKVRHKNVVQFIG 356
+ G++G L R + A+K+L+ E I D E +++ RH +
Sbjct: 13 LGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRHPFLTALKY 72
Query: 357 ACTKPPSLCIVTEFMSGGSVYDYLHKLKGVFKLPSLLKVAIDVSKGMNYLHQNNIIHRDL 416
A LC V E+ +GG ++ +L + + VF ++ + YLH ++++RD+
Sbjct: 73 AFQTHDRLCFVMEYANGGELFFHLSRER-VFTEERARFYGAEIVSALEYLHSRDVVYRDI 131
Query: 417 KAANLLMDEN 426
K NL++D++
Sbjct: 132 KLENLMLDKD 141
>pdb|3EQC|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Ternary Complex With
Compound 1, Atp-Gs And Mg2p
pdb|3EQD|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With Atp-Gs
And Mg2p
pdb|3EQF|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With K252a
And Mg2p
pdb|3EQG|A Chain A, X-ray Structure Of The Human Mitogen-activated Protein
Kinase Kinase 1 (mek1) In A Ternary Complex With Pd, Adp
And Mg2p
pdb|3EQH|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Ternary Complex With U0126,
Adp And Mg2p
pdb|3EQI|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With Adp And
Mg2p
Length = 360
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 42/145 (28%), Positives = 75/145 (51%), Gaps = 6/145 (4%)
Query: 298 SKVASGSYGDLYRGTY-CSQDVAIKVLKPERINSDMQKEFAQEVFIMRKVRHKNVVQFIG 356
S++ +G+ G +++ ++ S V + L I ++ + +E+ ++ + +V F G
Sbjct: 39 SELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSPYIVGFYG 98
Query: 357 ACTKPPSLCIVTEFMSGGSVYDYLHKLKGVFKLPSLLKVAIDVSKGMNYLHQ-NNIIHRD 415
A + I E M GGS+ D + K G L KV+I V KG+ YL + + I+HRD
Sbjct: 99 AFYSDGEISICMEHMDGGSL-DQVLKKAGRIPEQILGKVSIAVIKGLTYLREKHKIMHRD 157
Query: 416 LKAANLLMDENEVSLLLSLCLFTVS 440
+K +N+L++ + LC F VS
Sbjct: 158 VKPSNILVNSRGE---IKLCDFGVS 179
>pdb|2AC5|A Chain A, Structure Of Human Mnk2 Kinase Domain Mutant D228g
pdb|2HW7|A Chain A, Crystal Structure Of Mnk2-D228g In Complex With
Staurosporine
Length = 316
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 36/117 (30%), Positives = 67/117 (57%), Gaps = 5/117 (4%)
Query: 315 SQDVAIKVLKPERINSDMQKEFAQEVFIMRKVR-HKNVVQFIGACTKPPSLCIVTEFMSG 373
SQ+ A+K++ E+ ++ +EV ++ + + H+NV++ I + +V E M G
Sbjct: 38 SQEYAVKII--EKQPGHIRSRVFREVEMLYQCQGHRNVLELIEFFEEEDRFYLVFEKMRG 95
Query: 374 GSVYDYLHKLKGVFKLPSLLKVAIDVSKGMNYLHQNNIIHRDLKAANLLMDE-NEVS 429
GS+ ++HK + +L + + V DV+ +++LH I HRDLK N+L + N+VS
Sbjct: 96 GSILSHIHKRRHFNELEASV-VVQDVASALDFLHNKGIAHRDLKPENILCEHPNQVS 151
>pdb|3D83|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biphenyl
Amide Inhibitor
pdb|3IPH|A Chain A, Crystal Structure Of P38 In Complex With A Biphenylamide
Inhibitor
Length = 360
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 41/154 (26%), Positives = 71/154 (46%), Gaps = 22/154 (14%)
Query: 286 VWEIDPKHLKFGSKVASGSYGDLYRG--TYCSQDVAIKVLKPERINSDMQKEFAQEVFIM 343
+WE+ P+ + S V SG+YG + T VA+K L + K +E+ ++
Sbjct: 17 IWEV-PERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLL 75
Query: 344 RKVRHKNVVQFIGACTKPPSL------CIVTEFMSGGSVYDYLHKLKGVFKLPSLLK--- 394
+ ++H+NV+ + T SL +VT M L + K L
Sbjct: 76 KHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGA--------DLNNIVKXQKLTDDHV 127
Query: 395 --VAIDVSKGMNYLHQNNIIHRDLKAANLLMDEN 426
+ + +G+ Y+H +IIHRDLK +NL ++E+
Sbjct: 128 QFLIYQILRGLKYIHSADIIHRDLKPSNLAVNED 161
>pdb|2BAL|A Chain A, P38alpha Map Kinase Bound To Pyrazoloamine
pdb|4AA5|A Chain A, P38alpha Map Kinase Bound To Cmpd 33
Length = 365
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 41/154 (26%), Positives = 71/154 (46%), Gaps = 22/154 (14%)
Query: 286 VWEIDPKHLKFGSKVASGSYGDLYRG--TYCSQDVAIKVLKPERINSDMQKEFAQEVFIM 343
+WE+ P+ + S V SG+YG + T VA+K L + K +E+ ++
Sbjct: 22 IWEV-PERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLL 80
Query: 344 RKVRHKNVVQFIGACTKPPSL------CIVTEFMSGGSVYDYLHKLKGVFKLPSLLK--- 394
+ ++H+NV+ + T SL +VT M L + K L
Sbjct: 81 KHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGA--------DLNNIVKCQKLTDDHV 132
Query: 395 --VAIDVSKGMNYLHQNNIIHRDLKAANLLMDEN 426
+ + +G+ Y+H +IIHRDLK +NL ++E+
Sbjct: 133 QFLIYQILRGLKYIHSADIIHRDLKPSNLAVNED 166
>pdb|2AC3|A Chain A, Structure Of Human Mnk2 Kinase Domain
Length = 316
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 36/117 (30%), Positives = 67/117 (57%), Gaps = 5/117 (4%)
Query: 315 SQDVAIKVLKPERINSDMQKEFAQEVFIMRKVR-HKNVVQFIGACTKPPSLCIVTEFMSG 373
SQ+ A+K++ E+ ++ +EV ++ + + H+NV++ I + +V E M G
Sbjct: 38 SQEYAVKII--EKQPGHIRSRVFREVEMLYQCQGHRNVLELIEFFEEEDRFYLVFEKMRG 95
Query: 374 GSVYDYLHKLKGVFKLPSLLKVAIDVSKGMNYLHQNNIIHRDLKAANLLMDE-NEVS 429
GS+ ++HK + +L + + V DV+ +++LH I HRDLK N+L + N+VS
Sbjct: 96 GSILSHIHKRRHFNELEASV-VVQDVASALDFLHNKGIAHRDLKPENILCEHPNQVS 151
>pdb|2XCK|A Chain A, Crystal Structure Of Pdk1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 309
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 36/136 (26%), Positives = 61/136 (44%), Gaps = 4/136 (2%)
Query: 294 LKFGSKVASGSYGD--LYRGTYCSQDVAIKVLKPERINSDMQKEF-AQEVFIMRKVRHKN 350
KFG + GS+ L R S++ AIK+L+ I + + + +E +M ++ H
Sbjct: 32 FKFGKILGEGSFSTTVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPF 91
Query: 351 VVQFIGACTKPPSLCIVTEFMSGGSVYDYLHKLKGVFKLPSLLKVAIDVSKGMNYLHQNN 410
V+ L + G + Y+ K+ G F ++ + YLH
Sbjct: 92 FVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKI-GSFDETCTRFYTAEIVSALEYLHGKG 150
Query: 411 IIHRDLKAANLLMDEN 426
IIHRDLK N+L++E+
Sbjct: 151 IIHRDLKPENILLNED 166
>pdb|4HGL|A Chain A, Crystal Structure Of Ck1g3 With Compound 1
pdb|4HGS|A Chain A, Crystal Structure Of Ck1gs With Compound 13
Length = 330
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 40/145 (27%), Positives = 72/145 (49%), Gaps = 11/145 (7%)
Query: 283 GTDVWEIDPKHLKFGSKVASGSYGDLYRGT--YCSQDVAIKV--LKPERINSDMQKEFAQ 338
G+ V + P + + G K+ G++G+L G Y ++ VAIK+ +K ++ F +
Sbjct: 1 GSGVLMVGP-NFRVGKKIGCGNFGELRLGKNLYTNEYVAIKLEPMKSRAPQLHLEYRFYK 59
Query: 339 EVFIMRKVRHKNVVQFIGACTKPPSLCIVTEFMSGGSVYDYLHKLKGVFKLPSLLKVAID 398
++ + V + G C K ++ V E + G S+ D F L ++L +AI
Sbjct: 60 QLGSGDGIPQ---VYYFGPCGKYNAM--VLELL-GPSLEDLFDLCDRTFSLKTVLMIAIQ 113
Query: 399 VSKGMNYLHQNNIIHRDLKAANLLM 423
+ M Y+H N+I+RD+K N L+
Sbjct: 114 LISRMEYVHSKNLIYRDVKPENFLI 138
>pdb|1S9J|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3DY7|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3E8N|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) Complexed With A Potent Inhibitor
Rdea119 And Mgatp
pdb|3V01|A Chain A, Discovery Of Novel Allosteric Mek Inhibitors Possessing
Classical And Non-Classical Bidentate Ser212
Interactions.
pdb|3V04|A Chain A, Discovery Of Novel Allosteric Mek Inhibitors Possessing
Classical And Non-Classical Bidentate Ser212
Interactions
Length = 341
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 42/145 (28%), Positives = 75/145 (51%), Gaps = 6/145 (4%)
Query: 298 SKVASGSYGDLYRGTY-CSQDVAIKVLKPERINSDMQKEFAQEVFIMRKVRHKNVVQFIG 356
S++ +G+ G +++ ++ S V + L I ++ + +E+ ++ + +V F G
Sbjct: 12 SELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSPYIVGFYG 71
Query: 357 ACTKPPSLCIVTEFMSGGSVYDYLHKLKGVFKLPSLLKVAIDVSKGMNYLHQ-NNIIHRD 415
A + I E M GGS+ D + K G L KV+I V KG+ YL + + I+HRD
Sbjct: 72 AFYSDGEISICMEHMDGGSL-DQVLKKAGRIPEQILGKVSIAVIKGLTYLREKHKIMHRD 130
Query: 416 LKAANLLMDENEVSLLLSLCLFTVS 440
+K +N+L++ + LC F VS
Sbjct: 131 VKPSNILVNSRGE---IKLCDFGVS 152
>pdb|2Y8O|A Chain A, Crystal Structure Of Human P38alpha Complexed With A Mapk
Docking Peptide
Length = 362
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 41/154 (26%), Positives = 71/154 (46%), Gaps = 22/154 (14%)
Query: 286 VWEIDPKHLKFGSKVASGSYGDLYRG--TYCSQDVAIKVLKPERINSDMQKEFAQEVFIM 343
+WE+ P+ + S V SG+YG + T VA+K L + K +E+ ++
Sbjct: 19 IWEV-PERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLL 77
Query: 344 RKVRHKNVVQFIGACTKPPSL------CIVTEFMSGGSVYDYLHKLKGVFKLPSLLK--- 394
+ ++H+NV+ + T SL +VT M L + K L
Sbjct: 78 KHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGA--------DLNNIVKCQKLTDDHV 129
Query: 395 --VAIDVSKGMNYLHQNNIIHRDLKAANLLMDEN 426
+ + +G+ Y+H +IIHRDLK +NL ++E+
Sbjct: 130 QFLIYQILRGLKYIHSADIIHRDLKPSNLAVNED 163
>pdb|3E87|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E87|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E88|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E88|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E8D|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E8D|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3D0E|A Chain A, Crystal Structure Of Human Akt2 In Complex With Gsk690693
pdb|3D0E|B Chain B, Crystal Structure Of Human Akt2 In Complex With Gsk690693
Length = 335
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 32/130 (24%), Positives = 62/130 (47%), Gaps = 4/130 (3%)
Query: 300 VASGSYGD--LYRGTYCSQDVAIKVLKPERI-NSDMQKEFAQEVFIMRKVRHKNVVQFIG 356
+ G++G L R + A+K+L+ E I D E +++ RH +
Sbjct: 13 LGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRHPFLTALKY 72
Query: 357 ACTKPPSLCIVTEFMSGGSVYDYLHKLKGVFKLPSLLKVAIDVSKGMNYLHQNNIIHRDL 416
A LC V E+ +GG ++ +L + + VF ++ + YLH ++++RD+
Sbjct: 73 AFQTHDRLCFVMEYANGGELFFHLSRER-VFTEERARFYGAEIVSALEYLHSRDVVYRDI 131
Query: 417 KAANLLMDEN 426
K NL++D++
Sbjct: 132 KLENLMLDKD 141
>pdb|3D7Z|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biphenyl
Amide Inhibitor
Length = 360
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 41/154 (26%), Positives = 71/154 (46%), Gaps = 22/154 (14%)
Query: 286 VWEIDPKHLKFGSKVASGSYGDLYRG--TYCSQDVAIKVLKPERINSDMQKEFAQEVFIM 343
+WE+ P+ + S V SG+YG + T VA+K L + K +E+ ++
Sbjct: 17 IWEV-PERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLL 75
Query: 344 RKVRHKNVVQFIGACTKPPSL------CIVTEFMSGGSVYDYLHKLKGVFKLPSLLK--- 394
+ ++H+NV+ + T SL +VT M L + K L
Sbjct: 76 KHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGA--------DLNNIVKXQKLTDDHV 127
Query: 395 --VAIDVSKGMNYLHQNNIIHRDLKAANLLMDEN 426
+ + +G+ Y+H +IIHRDLK +NL ++E+
Sbjct: 128 QFLIYQILRGLKYIHSADIIHRDLKPSNLAVNED 161
>pdb|2P55|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3EQB|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
Length = 333
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 42/145 (28%), Positives = 75/145 (51%), Gaps = 6/145 (4%)
Query: 298 SKVASGSYGDLYRGTY-CSQDVAIKVLKPERINSDMQKEFAQEVFIMRKVRHKNVVQFIG 356
S++ +G+ G +++ ++ S V + L I ++ + +E+ ++ + +V F G
Sbjct: 12 SELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSPYIVGFYG 71
Query: 357 ACTKPPSLCIVTEFMSGGSVYDYLHKLKGVFKLPSLLKVAIDVSKGMNYLHQ-NNIIHRD 415
A + I E M GGS+ D + K G L KV+I V KG+ YL + + I+HRD
Sbjct: 72 AFYSDGEISICMEHMDGGSL-DQVLKKAGRIPEQILGKVSIAVIKGLTYLREKHKIMHRD 130
Query: 416 LKAANLLMDENEVSLLLSLCLFTVS 440
+K +N+L++ + LC F VS
Sbjct: 131 VKPSNILVNSRGE---IKLCDFGVS 152
>pdb|3MH0|A Chain A, Mutagenesis Of P38 Map Kinase Eshtablishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3O8T|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg-Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 41/154 (26%), Positives = 71/154 (46%), Gaps = 22/154 (14%)
Query: 286 VWEIDPKHLKFGSKVASGSYGDLYRG--TYCSQDVAIKVLKPERINSDMQKEFAQEVFIM 343
+WE+ P+ + S V SG+YG + T VA+K L + K +E+ ++
Sbjct: 17 IWEV-PERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLL 75
Query: 344 RKVRHKNVVQFIGACTKPPSL------CIVTEFMSGGSVYDYLHKLKGVFKLPSLLK--- 394
+ ++H+NV+ + T SL +VT M L + K L
Sbjct: 76 KHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGA--------DLNNIVKCQKLTDDHV 127
Query: 395 --VAIDVSKGMNYLHQNNIIHRDLKAANLLMDEN 426
+ + +G+ Y+H +IIHRDLK +NL ++E+
Sbjct: 128 QFLIYQILRGLKYIHSADIIHRDLKPSNLAVNED 161
>pdb|3MH3|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3OBJ|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Mutants In
Response To Inhibitor Binding
Length = 360
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 41/154 (26%), Positives = 71/154 (46%), Gaps = 22/154 (14%)
Query: 286 VWEIDPKHLKFGSKVASGSYGDLYRG--TYCSQDVAIKVLKPERINSDMQKEFAQEVFIM 343
+WE+ P+ + S V SG+YG + T VA+K L + K +E+ ++
Sbjct: 17 IWEV-PERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLL 75
Query: 344 RKVRHKNVVQFIGACTKPPSL------CIVTEFMSGGSVYDYLHKLKGVFKLPSLLK--- 394
+ ++H+NV+ + T SL +VT M L + K L
Sbjct: 76 KHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGA--------DLNNIVKCQKLTDDHV 127
Query: 395 --VAIDVSKGMNYLHQNNIIHRDLKAANLLMDEN 426
+ + +G+ Y+H +IIHRDLK +NL ++E+
Sbjct: 128 QFLIYQILRGLKYIHSADIIHRDLKPSNLAVNED 161
>pdb|3ZSG|A Chain A, X-Ray Structure Of P38alpha Bound To Tak-715
pdb|3ZSH|A Chain A, X-Ray Structure Of P38alpha Bound To Scio-469
pdb|3ZSI|A Chain A, X-Ray Structure Of P38alpha Bound To Vx-745
pdb|3ZS5|A Chain A, Structural Basis For Kinase Selectivity Of Three Clinical
P38alpha Inhibitors
Length = 362
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 41/154 (26%), Positives = 71/154 (46%), Gaps = 22/154 (14%)
Query: 286 VWEIDPKHLKFGSKVASGSYGDLYRG--TYCSQDVAIKVLKPERINSDMQKEFAQEVFIM 343
+WE+ P+ + S V SG+YG + T VA+K L + K +E+ ++
Sbjct: 19 IWEV-PERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLL 77
Query: 344 RKVRHKNVVQFIGACTKPPSL------CIVTEFMSGGSVYDYLHKLKGVFKLPSLLK--- 394
+ ++H+NV+ + T SL +VT M L + K L
Sbjct: 78 KHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGA--------DLNNIVKCQKLTDDHV 129
Query: 395 --VAIDVSKGMNYLHQNNIIHRDLKAANLLMDEN 426
+ + +G+ Y+H +IIHRDLK +NL ++E+
Sbjct: 130 QFLIYQILRGLKYIHSADIIHRDLKPSNLAVNED 163
>pdb|4A07|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Activator Ps171 Bound To The Pif-Pocket
pdb|4AW0|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Compound Ps182 Bound To The Pif-Pocket
Length = 311
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 36/136 (26%), Positives = 61/136 (44%), Gaps = 4/136 (2%)
Query: 294 LKFGSKVASGSYGD--LYRGTYCSQDVAIKVLKPERINSDMQKEF-AQEVFIMRKVRHKN 350
KFG + GS+ L R S++ AIK+L+ I + + + +E +M ++ H
Sbjct: 34 FKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPF 93
Query: 351 VVQFIGACTKPPSLCIVTEFMSGGSVYDYLHKLKGVFKLPSLLKVAIDVSKGMNYLHQNN 410
V+ L + G + Y+ K+ G F ++ + YLH
Sbjct: 94 FVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKI-GSFDETCTRFYTAEIVSALEYLHGKG 152
Query: 411 IIHRDLKAANLLMDEN 426
IIHRDLK N+L++E+
Sbjct: 153 IIHRDLKPENILLNED 168
>pdb|2XCH|A Chain A, Crystal Structure Of Pdk1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 309
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 36/136 (26%), Positives = 61/136 (44%), Gaps = 4/136 (2%)
Query: 294 LKFGSKVASGSYGD--LYRGTYCSQDVAIKVLKPERINSDMQKEF-AQEVFIMRKVRHKN 350
KFG + GS+ L R S++ AIK+L+ I + + + +E +M ++ H
Sbjct: 32 FKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPF 91
Query: 351 VVQFIGACTKPPSLCIVTEFMSGGSVYDYLHKLKGVFKLPSLLKVAIDVSKGMNYLHQNN 410
V+ L + G + Y+ K+ G F ++ + YLH
Sbjct: 92 FVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKI-GSFDETCTRFYTAEIVSALEYLHGKG 150
Query: 411 IIHRDLKAANLLMDEN 426
IIHRDLK N+L++E+
Sbjct: 151 IIHRDLKPENILLNED 166
>pdb|3MH1|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3OBG|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Mutants In
Response To Inhibitor Binding
pdb|3OC1|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 41/154 (26%), Positives = 71/154 (46%), Gaps = 22/154 (14%)
Query: 286 VWEIDPKHLKFGSKVASGSYGDLYRG--TYCSQDVAIKVLKPERINSDMQKEFAQEVFIM 343
+WE+ P+ + S V SG+YG + T VA+K L + K +E+ ++
Sbjct: 17 IWEV-PERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLL 75
Query: 344 RKVRHKNVVQFIGACTKPPSL------CIVTEFMSGGSVYDYLHKLKGVFKLPSLLK--- 394
+ ++H+NV+ + T SL +VT M L + K L
Sbjct: 76 KHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGA--------DLNNIVKCQKLTDDHV 127
Query: 395 --VAIDVSKGMNYLHQNNIIHRDLKAANLLMDEN 426
+ + +G+ Y+H +IIHRDLK +NL ++E+
Sbjct: 128 QFLIYQILRGLKYIHSADIIHRDLKPSNLAVNED 161
>pdb|1BL6|A Chain A, The Complex Structure Of The Map Kinase P38SB216995
pdb|1BL7|A Chain A, The Complex Structure Of The Map Kinase P38SB220025
pdb|2EWA|A Chain A, Dual Binding Mode Of Pyridinylimidazole To Map Kinase P38
pdb|1A9U|A Chain A, The Complex Structure Of The Map Kinase P38SB203580
pdb|3HA8|A Chain A, The Complex Structure Of The Map Kinase P38COMPOUND 14B
Length = 379
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 41/154 (26%), Positives = 71/154 (46%), Gaps = 22/154 (14%)
Query: 286 VWEIDPKHLKFGSKVASGSYGDLYRG--TYCSQDVAIKVLKPERINSDMQKEFAQEVFIM 343
+WE+ P+ + S V SG+YG + T VA+K L + K +E+ ++
Sbjct: 36 IWEV-PERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLL 94
Query: 344 RKVRHKNVVQFIGACTKPPSL------CIVTEFMSGGSVYDYLHKLKGVFKLPSLLK--- 394
+ ++H+NV+ + T SL +VT M L + K L
Sbjct: 95 KHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGA--------DLNNIVKCQKLTDDHV 146
Query: 395 --VAIDVSKGMNYLHQNNIIHRDLKAANLLMDEN 426
+ + +G+ Y+H +IIHRDLK +NL ++E+
Sbjct: 147 QFLIYQILRGLKYIHSADIIHRDLKPSNLAVNED 180
>pdb|3ODY|X Chain X, Crystal Structure Of P38alpha Y323q Active Mutant
Length = 360
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 41/154 (26%), Positives = 71/154 (46%), Gaps = 22/154 (14%)
Query: 286 VWEIDPKHLKFGSKVASGSYGDLYRG--TYCSQDVAIKVLKPERINSDMQKEFAQEVFIM 343
+WE+ P+ + S V SG+YG + T VA+K L + K +E+ ++
Sbjct: 17 IWEV-PERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLL 75
Query: 344 RKVRHKNVVQFIGACTKPPSL------CIVTEFMSGGSVYDYLHKLKGVFKLPSLLK--- 394
+ ++H+NV+ + T SL +VT M L + K L
Sbjct: 76 KHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGA--------DLNNIVKCQKLTDDHV 127
Query: 395 --VAIDVSKGMNYLHQNNIIHRDLKAANLLMDEN 426
+ + +G+ Y+H +IIHRDLK +NL ++E+
Sbjct: 128 QFLIYQILRGLKYIHSADIIHRDLKPSNLAVNED 161
>pdb|3OD6|X Chain X, Crystal Structure Of P38alpha Y323t Active Mutant
Length = 360
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 41/154 (26%), Positives = 71/154 (46%), Gaps = 22/154 (14%)
Query: 286 VWEIDPKHLKFGSKVASGSYGDLYRG--TYCSQDVAIKVLKPERINSDMQKEFAQEVFIM 343
+WE+ P+ + S V SG+YG + T VA+K L + K +E+ ++
Sbjct: 17 IWEV-PERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLL 75
Query: 344 RKVRHKNVVQFIGACTKPPSL------CIVTEFMSGGSVYDYLHKLKGVFKLPSLLK--- 394
+ ++H+NV+ + T SL +VT M L + K L
Sbjct: 76 KHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGA--------DLNNIVKCQKLTDDHV 127
Query: 395 --VAIDVSKGMNYLHQNNIIHRDLKAANLLMDEN 426
+ + +G+ Y+H +IIHRDLK +NL ++E+
Sbjct: 128 QFLIYQILRGLKYIHSADIIHRDLKPSNLAVNED 161
>pdb|3K3J|A Chain A, P38alpha Bound To Novel Dfg-Out Compound Pf-00416121
Length = 362
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 41/154 (26%), Positives = 71/154 (46%), Gaps = 22/154 (14%)
Query: 286 VWEIDPKHLKFGSKVASGSYGDLYRG--TYCSQDVAIKVLKPERINSDMQKEFAQEVFIM 343
+WE+ P+ + S V SG+YG + T VA+K L + K +E+ ++
Sbjct: 19 IWEV-PERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLL 77
Query: 344 RKVRHKNVVQFIGACTKPPSL------CIVTEFMSGGSVYDYLHKLKGVFKLPSLLK--- 394
+ ++H+NV+ + T SL +VT M L + K L
Sbjct: 78 KHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGA--------DLNNIVKCQKLTDDHV 129
Query: 395 --VAIDVSKGMNYLHQNNIIHRDLKAANLLMDEN 426
+ + +G+ Y+H +IIHRDLK +NL ++E+
Sbjct: 130 QFLIYQILRGLKYIHSADIIHRDLKPSNLAVNED 163
>pdb|3MH2|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3O8U|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 41/154 (26%), Positives = 71/154 (46%), Gaps = 22/154 (14%)
Query: 286 VWEIDPKHLKFGSKVASGSYGDLYRG--TYCSQDVAIKVLKPERINSDMQKEFAQEVFIM 343
+WE+ P+ + S V SG+YG + T VA+K L + K +E+ ++
Sbjct: 17 IWEV-PERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLL 75
Query: 344 RKVRHKNVVQFIGACTKPPSL------CIVTEFMSGGSVYDYLHKLKGVFKLPSLLK--- 394
+ ++H+NV+ + T SL +VT M L + K L
Sbjct: 76 KHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGA--------DLNNIVKCQKLTDDHV 127
Query: 395 --VAIDVSKGMNYLHQNNIIHRDLKAANLLMDEN 426
+ + +G+ Y+H +IIHRDLK +NL ++E+
Sbjct: 128 QFLIYQILRGLKYIHSADIIHRDLKPSNLAVNED 161
>pdb|2FSL|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a+f327s)
Activating Mutant Form-A
pdb|2FSM|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a+f327s)
Activating Mutant Form-B
Length = 367
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 41/154 (26%), Positives = 71/154 (46%), Gaps = 22/154 (14%)
Query: 286 VWEIDPKHLKFGSKVASGSYGDLYRG--TYCSQDVAIKVLKPERINSDMQKEFAQEVFIM 343
+WE+ P+ + S V SG+YG + T VA+K L + K +E+ ++
Sbjct: 24 IWEV-PERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLL 82
Query: 344 RKVRHKNVVQFIGACTKPPSL------CIVTEFMSGGSVYDYLHKLKGVFKLPSLLK--- 394
+ ++H+NV+ + T SL +VT M L + K L
Sbjct: 83 KHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGA--------DLNNIVKCQKLTDDHV 134
Query: 395 --VAIDVSKGMNYLHQNNIIHRDLKAANLLMDEN 426
+ + +G+ Y+H +IIHRDLK +NL ++E+
Sbjct: 135 QFLIYQILRGLKYIHSADIIHRDLKPSNLAVNED 168
>pdb|1M7Q|A Chain A, Crystal Structure Of P38 Map Kinase In Complex With A
Dihydroquinazolinone Inhibitor
pdb|1OUK|A Chain A, The Structure Of P38 Alpha In Complex With A
Pyridinylimidazole Inhibitor
pdb|1OUY|A Chain A, The Structure Of P38 Alpha In Complex With A
Dihydropyrido- Pyrimidine Inhibitor
pdb|1R39|A Chain A, The Structure Of P38alpha
pdb|1YQJ|A Chain A, Crystal Structure Of P38 Alpha In Complex With A Selective
Pyridazine Inhibitor
pdb|2OKR|A Chain A, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2OKR|D Chain D, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2ONL|A Chain A, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2ONL|B Chain B, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|1WFC|A Chain A, Structure Of Apo, Unphosphorylated, P38 Mitogen Activated
Protein Kinase P38 (P38 Map Kinase) The Mammalian
Homologue Of The Yeast Hog1 Protein
pdb|3DS6|A Chain A, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|B Chain B, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|C Chain C, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|D Chain D, P38 Complex With A Phthalazine Inhibitor
pdb|3FC1|X Chain X, Crystal Structure Of P38 Kinase Bound To
Pyrimido-Pyridazinone Inhibitor
pdb|3GFE|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridinone Inhibitor
pdb|3ITZ|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridazine Inhibitor
pdb|3LHJ|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridinone Inhibitor.
pdb|3ZYA|A Chain A, Human P38 Map Kinase In Complex With 2-Amino-Phenylamino-
Dibenzosuberone
pdb|3U8W|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Triazolopyridazinone Inhibitor
Length = 366
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 41/154 (26%), Positives = 71/154 (46%), Gaps = 22/154 (14%)
Query: 286 VWEIDPKHLKFGSKVASGSYGDLYRG--TYCSQDVAIKVLKPERINSDMQKEFAQEVFIM 343
+WE+ P+ + S V SG+YG + T VA+K L + K +E+ ++
Sbjct: 23 IWEV-PERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLL 81
Query: 344 RKVRHKNVVQFIGACTKPPSL------CIVTEFMSGGSVYDYLHKLKGVFKLPSLLK--- 394
+ ++H+NV+ + T SL +VT M L + K L
Sbjct: 82 KHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGA--------DLNNIVKCQKLTDDHV 133
Query: 395 --VAIDVSKGMNYLHQNNIIHRDLKAANLLMDEN 426
+ + +G+ Y+H +IIHRDLK +NL ++E+
Sbjct: 134 QFLIYQILRGLKYIHSADIIHRDLKPSNLAVNED 167
>pdb|2BIY|A Chain A, Structure Of Pdk1-S241a Mutant Kinase Domain
Length = 310
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 36/136 (26%), Positives = 61/136 (44%), Gaps = 4/136 (2%)
Query: 294 LKFGSKVASGSYGD--LYRGTYCSQDVAIKVLKPERINSDMQKEF-AQEVFIMRKVRHKN 350
KFG + GS+ L R S++ AIK+L+ I + + + +E +M ++ H
Sbjct: 32 FKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPF 91
Query: 351 VVQFIGACTKPPSLCIVTEFMSGGSVYDYLHKLKGVFKLPSLLKVAIDVSKGMNYLHQNN 410
V+ L + G + Y+ K+ G F ++ + YLH
Sbjct: 92 FVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKI-GSFDETCTRFYTAEIVSALEYLHGKG 150
Query: 411 IIHRDLKAANLLMDEN 426
IIHRDLK N+L++E+
Sbjct: 151 IIHRDLKPENILLNED 166
>pdb|4E5A|X Chain X, The W197a Mutant Of P38a Map Kinase
Length = 360
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 41/154 (26%), Positives = 71/154 (46%), Gaps = 22/154 (14%)
Query: 286 VWEIDPKHLKFGSKVASGSYGDLYRG--TYCSQDVAIKVLKPERINSDMQKEFAQEVFIM 343
+WE+ P+ + S V SG+YG + T VA+K L + K +E+ ++
Sbjct: 17 IWEV-PERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLL 75
Query: 344 RKVRHKNVVQFIGACTKPPSL------CIVTEFMSGGSVYDYLHKLKGVFKLPSLLK--- 394
+ ++H+NV+ + T SL +VT M L + K L
Sbjct: 76 KHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGA--------DLNNIVKCQKLTDDHV 127
Query: 395 --VAIDVSKGMNYLHQNNIIHRDLKAANLLMDEN 426
+ + +G+ Y+H +IIHRDLK +NL ++E+
Sbjct: 128 QFLIYQILRGLKYIHSADIIHRDLKPSNLAVNED 161
>pdb|3ODZ|X Chain X, Crystal Structure Of P38alpha Y323r Active Mutant
Length = 360
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 41/154 (26%), Positives = 71/154 (46%), Gaps = 22/154 (14%)
Query: 286 VWEIDPKHLKFGSKVASGSYGDLYRG--TYCSQDVAIKVLKPERINSDMQKEFAQEVFIM 343
+WE+ P+ + S V SG+YG + T VA+K L + K +E+ ++
Sbjct: 17 IWEV-PERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLL 75
Query: 344 RKVRHKNVVQFIGACTKPPSL------CIVTEFMSGGSVYDYLHKLKGVFKLPSLLK--- 394
+ ++H+NV+ + T SL +VT M L + K L
Sbjct: 76 KHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGA--------DLNNIVKCQKLTDDHV 127
Query: 395 --VAIDVSKGMNYLHQNNIIHRDLKAANLLMDEN 426
+ + +G+ Y+H +IIHRDLK +NL ++E+
Sbjct: 128 QFLIYQILRGLKYIHSADIIHRDLKPSNLAVNED 161
>pdb|3GCU|A Chain A, Human P38 Map Kinase In Complex With Rl48
pdb|3GCU|B Chain B, Human P38 Map Kinase In Complex With Rl48
pdb|3HV4|A Chain A, Human P38 Map Kinase In Complex With Rl51
pdb|3HV4|B Chain B, Human P38 Map Kinase In Complex With Rl51
pdb|3HV5|A Chain A, Human P38 Map Kinase In Complex With Rl24
pdb|3HV5|B Chain B, Human P38 Map Kinase In Complex With Rl24
pdb|3HV6|A Chain A, Human P38 Map Kinase In Complex With Rl39
pdb|3HV7|A Chain A, Human P38 Map Kinase In Complex With Rl38
pdb|3HUC|A Chain A, Human P38 Map Kinase In Complex With Rl40
pdb|3LFA|A Chain A, Human P38 Map Kinase In Complex With Dasatinib
pdb|3QUE|A Chain A, Human P38 Map Kinase In Complex With Skepinone-L
pdb|3QUD|A Chain A, Human P38 Map Kinase In Complex With
2-Amino-Phenylamino-Benzophenone
pdb|3UVP|A Chain A, Human P38 Map Kinase In Complex With A Benzamide
Substituted Benzosuberone
pdb|3UVQ|A Chain A, Human P38 Map Kinase In Complex With A Dibenzosuberone
Derivative
pdb|4EH2|A Chain A, Human P38 Map Kinase In Complex With Np-F1 And Rl87
pdb|4EH3|A Chain A, Human P38 Map Kinase In Complex With Np-F2 And Rl87
pdb|4EH4|A Chain A, Human P38 Map Kinase In Complex With Np-F3 And Rl87
pdb|4EH5|A Chain A, Human P38 Map Kinase In Complex With Np-F4 And Rl87
pdb|4EH6|A Chain A, Human P38 Map Kinase In Complex With Np-F5 And Rl87
pdb|4EH7|A Chain A, Human P38 Map Kinase In Complex With Np-F6 And Rl87
pdb|4EH8|A Chain A, Human P38 Map Kinase In Complex With Np-F7 And Rl87
pdb|4EH9|A Chain A, Human P38 Map Kinase In Complex With Np-F11 And Rl87
pdb|4EHV|A Chain A, Human P38 Map Kinase In Complex With Np-F10 And Rl87
pdb|3UVR|A Chain A, Human P38 Map Kinase In Complex With Km064
pdb|4DLI|A Chain A, Human P38 Map Kinase In Complex With Rl87
pdb|4DLJ|A Chain A, Human P38 Map Kinase In Complex With Rl163
Length = 360
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 41/154 (26%), Positives = 71/154 (46%), Gaps = 22/154 (14%)
Query: 286 VWEIDPKHLKFGSKVASGSYGDLYRG--TYCSQDVAIKVLKPERINSDMQKEFAQEVFIM 343
+WE+ P+ + S V SG+YG + T VA+K L + K +E+ ++
Sbjct: 17 IWEV-PERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLL 75
Query: 344 RKVRHKNVVQFIGACTKPPSL------CIVTEFMSGGSVYDYLHKLKGVFKLPSLLK--- 394
+ ++H+NV+ + T SL +VT M L + K L
Sbjct: 76 KHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGA--------DLNNIVKCQKLTDDHV 127
Query: 395 --VAIDVSKGMNYLHQNNIIHRDLKAANLLMDEN 426
+ + +G+ Y+H +IIHRDLK +NL ++E+
Sbjct: 128 QFLIYQILRGLKYIHSADIIHRDLKPSNLAVNED 161
>pdb|3HVC|A Chain A, Crystal Structure Of Human P38alpha Map Kinase
Length = 362
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 41/154 (26%), Positives = 71/154 (46%), Gaps = 22/154 (14%)
Query: 286 VWEIDPKHLKFGSKVASGSYGDLYRG--TYCSQDVAIKVLKPERINSDMQKEFAQEVFIM 343
+WE+ P+ + S V SG+YG + T VA+K L + K +E+ ++
Sbjct: 19 IWEV-PERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLL 77
Query: 344 RKVRHKNVVQFIGACTKPPSL------CIVTEFMSGGSVYDYLHKLKGVFKLPSLLK--- 394
+ ++H+NV+ + T SL +VT M L + K L
Sbjct: 78 KHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGA--------DLNNIVKCQKLTDDHV 129
Query: 395 --VAIDVSKGMNYLHQNNIIHRDLKAANLLMDEN 426
+ + +G+ Y+H +IIHRDLK +NL ++E+
Sbjct: 130 QFLIYQILRGLKYIHSADIIHRDLKPSNLAVNED 163
>pdb|2LGC|A Chain A, Joint Nmr And X-Ray Refinement Reveals The Structure Of A
Novel Dibenzo[a,D]cycloheptenone InhibitorP38 MAP KINASE
COMPLEX IN Solution
Length = 359
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 41/154 (26%), Positives = 71/154 (46%), Gaps = 22/154 (14%)
Query: 286 VWEIDPKHLKFGSKVASGSYGDLYRG--TYCSQDVAIKVLKPERINSDMQKEFAQEVFIM 343
+WE+ P+ + S V SG+YG + T VA+K L + K +E+ ++
Sbjct: 22 IWEV-PERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLL 80
Query: 344 RKVRHKNVVQFIGACTKPPSL------CIVTEFMSGGSVYDYLHKLKGVFKLPSLLK--- 394
+ ++H+NV+ + T SL +VT M L + K L
Sbjct: 81 KHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGA--------DLNNIVKCQKLTDDHV 132
Query: 395 --VAIDVSKGMNYLHQNNIIHRDLKAANLLMDEN 426
+ + +G+ Y+H +IIHRDLK +NL ++E+
Sbjct: 133 QFLIYQILRGLKYIHSADIIHRDLKPSNLAVNED 166
>pdb|4EWQ|A Chain A, Human P38 Alpha Mapk In Complex With A Pyridazine Based
Inhibitor
Length = 383
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 41/154 (26%), Positives = 71/154 (46%), Gaps = 22/154 (14%)
Query: 286 VWEIDPKHLKFGSKVASGSYGDLYRG--TYCSQDVAIKVLKPERINSDMQKEFAQEVFIM 343
+WE+ P+ + S V SG+YG + T VA+K L + K +E+ ++
Sbjct: 40 IWEV-PERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLL 98
Query: 344 RKVRHKNVVQFIGACTKPPSL------CIVTEFMSGGSVYDYLHKLKGVFKLPSLLK--- 394
+ ++H+NV+ + T SL +VT M L + K L
Sbjct: 99 KHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGA--------DLNNIVKCQKLTDDHV 150
Query: 395 --VAIDVSKGMNYLHQNNIIHRDLKAANLLMDEN 426
+ + +G+ Y+H +IIHRDLK +NL ++E+
Sbjct: 151 QFLIYQILRGLKYIHSADIIHRDLKPSNLAVNED 184
>pdb|3KQ7|A Chain A, Structure Of Human P38alpha With N-[4-Methyl-3-(6-{[2-(1-
Methylpyrrolidin-2-Yl)ethyl]amino}pyridine-3-
Amido)phenyl]- 2-(Morpholin-4-Yl)pyridine-4-Carboxamide
Length = 380
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 41/154 (26%), Positives = 71/154 (46%), Gaps = 22/154 (14%)
Query: 286 VWEIDPKHLKFGSKVASGSYGDLYRG--TYCSQDVAIKVLKPERINSDMQKEFAQEVFIM 343
+WE+ P+ + S V SG+YG + T VA+K L + K +E+ ++
Sbjct: 37 IWEV-PERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLL 95
Query: 344 RKVRHKNVVQFIGACTKPPSL------CIVTEFMSGGSVYDYLHKLKGVFKLPSLLK--- 394
+ ++H+NV+ + T SL +VT M L + K L
Sbjct: 96 KHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGA--------DLNNIVKCQKLTDDHV 147
Query: 395 --VAIDVSKGMNYLHQNNIIHRDLKAANLLMDEN 426
+ + +G+ Y+H +IIHRDLK +NL ++E+
Sbjct: 148 QFLIYQILRGLKYIHSADIIHRDLKPSNLAVNED 181
>pdb|3DT1|A Chain A, P38 Complexed With A Quinazoline Inhibitor
Length = 383
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 41/154 (26%), Positives = 71/154 (46%), Gaps = 22/154 (14%)
Query: 286 VWEIDPKHLKFGSKVASGSYGDLYRG--TYCSQDVAIKVLKPERINSDMQKEFAQEVFIM 343
+WE+ P+ + S V SG+YG + T VA+K L + K +E+ ++
Sbjct: 40 IWEV-PERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLL 98
Query: 344 RKVRHKNVVQFIGACTKPPSL------CIVTEFMSGGSVYDYLHKLKGVFKLPSLLK--- 394
+ ++H+NV+ + T SL +VT M L + K L
Sbjct: 99 KHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGA--------DLNNIVKCQKLTDDHV 150
Query: 395 --VAIDVSKGMNYLHQNNIIHRDLKAANLLMDEN 426
+ + +G+ Y+H +IIHRDLK +NL ++E+
Sbjct: 151 QFLIYQILRGLKYIHSADIIHRDLKPSNLAVNED 184
>pdb|3P4K|A Chain A, The Third Conformation Of P38a Map Kinase Observed In
Phosphorylated P38a And In Solution
Length = 370
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 40/154 (25%), Positives = 71/154 (46%), Gaps = 22/154 (14%)
Query: 286 VWEIDPKHLKFGSKVASGSYGDLYRG--TYCSQDVAIKVLKPERINSDMQKEFAQEVFIM 343
+WE+ P+ + + V SG+YG + T VA+K L + K +E+ ++
Sbjct: 27 IWEV-PERYQNLAPVGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLL 85
Query: 344 RKVRHKNVVQFIGACTKPPSL------CIVTEFMSGGSVYDYLHKLKGVFKLPSLLK--- 394
+ ++H+NV+ + T SL +VT M L + K L
Sbjct: 86 KHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGA--------DLNNIVKCQKLTDDHV 137
Query: 395 --VAIDVSKGMNYLHQNNIIHRDLKAANLLMDEN 426
+ + +G+ Y+H +IIHRDLK +NL ++E+
Sbjct: 138 QFLIYQILRGLKYIHSADIIHRDLKPSNLAVNED 171
>pdb|2NPQ|A Chain A, A Novel Lipid Binding Site In The P38 Alpha Map Kinase
Length = 367
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 41/154 (26%), Positives = 71/154 (46%), Gaps = 22/154 (14%)
Query: 286 VWEIDPKHLKFGSKVASGSYGDLYRG--TYCSQDVAIKVLKPERINSDMQKEFAQEVFIM 343
+WE+ P+ + S V SG+YG + T VA+K L + K +E+ ++
Sbjct: 24 IWEV-PERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLL 82
Query: 344 RKVRHKNVVQFIGACTKPPSL------CIVTEFMSGGSVYDYLHKLKGVFKLPSLLK--- 394
+ ++H+NV+ + T SL +VT M L + K L
Sbjct: 83 KHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGA--------DLNNIVKCQKLTDDHV 134
Query: 395 --VAIDVSKGMNYLHQNNIIHRDLKAANLLMDEN 426
+ + +G+ Y+H +IIHRDLK +NL ++E+
Sbjct: 135 QFLIYQILRGLKYIHSADIIHRDLKPSNLAVNED 168
>pdb|1DI9|A Chain A, The Structure Of P38 Mitogen-Activated Protein Kinase In
Complex With 4-[3-Methylsulfanylanilino]-6,7-
Dimethoxyquinazoline
pdb|1KV1|A Chain A, P38 Map Kinase In Complex With Inhibitor 1
pdb|1KV2|A Chain A, Human P38 Map Kinase In Complex With Birb 796
pdb|1WBO|A Chain A, Fragment Based P38 Inhibitors
pdb|1W7H|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W82|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W83|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W84|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1ZZ2|A Chain A, Two Classes Of P38alpha Map Kinase Inhibitors Having A
Common Diphenylether Core But Exhibiting Divergent
Binding Modes
pdb|1WBN|A Chain A, Fragment Based P38 Inhibitors
pdb|1WBS|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1WBT|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-based Lead Generation.
pdb|1WBV|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1WBW|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1ZYJ|A Chain A, Human P38 Map Kinase In Complex With Inhibitor 1a
pdb|2ZAZ|A Chain A, Crystal Structure Of P38 In Complex With 4-Anilino
Quinoline Inhibitor
pdb|2ZB0|A Chain A, Crystal Structure Of P38 In Complex With Biphenyl Amide
Inhibitor
pdb|2ZB1|A Chain A, Crystal Structure Of P38 In Complex With Biphenyl Amide
Inhibitor
pdb|3HL7|A Chain A, Crystal Structure Of Human P38alpha Complexed With Sd-0006
pdb|3HLL|A Chain A, Crystal Structure Of Human P38alpha Complexed With
Ph-797804
pdb|3HP2|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Pyridinone Compound
pdb|3HP5|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Pyrimidopyridazinone Compound
pdb|3KF7|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Triazolopyrimidine Compound
pdb|3MGY|A Chain A, Mutagenesis Of P38 Map Kinase Eshtablishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3ROC|A Chain A, Crystal Structure Of Human P38 Alpha Complexed With A
Pyrimidinone Compound
pdb|3RIN|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|4E5B|A Chain A, Structure Of P38a Map Kinase Without Bog
pdb|4E6A|A Chain A, P38a-Pia23 Complex
pdb|4E6C|A Chain A, P38a-perifosine Complex
pdb|4E8A|A Chain A, The Crystal Structure Of P38a Map Kinase In Complex With
Pia24
Length = 360
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 41/154 (26%), Positives = 71/154 (46%), Gaps = 22/154 (14%)
Query: 286 VWEIDPKHLKFGSKVASGSYGDLYRG--TYCSQDVAIKVLKPERINSDMQKEFAQEVFIM 343
+WE+ P+ + S V SG+YG + T VA+K L + K +E+ ++
Sbjct: 17 IWEV-PERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLL 75
Query: 344 RKVRHKNVVQFIGACTKPPSL------CIVTEFMSGGSVYDYLHKLKGVFKLPSLLK--- 394
+ ++H+NV+ + T SL +VT M L + K L
Sbjct: 76 KHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGA--------DLNNIVKCQKLTDDHV 127
Query: 395 --VAIDVSKGMNYLHQNNIIHRDLKAANLLMDEN 426
+ + +G+ Y+H +IIHRDLK +NL ++E+
Sbjct: 128 QFLIYQILRGLKYIHSADIIHRDLKPSNLAVNED 161
>pdb|2BAJ|A Chain A, P38alpha Bound To Pyrazolourea
pdb|2BAK|A Chain A, P38alpha Map Kinase Bound To Mpaq
pdb|4A9Y|A Chain A, P38alpha Map Kinase Bound To Cmpd 8
pdb|4AA0|A Chain A, P38alpha Map Kinase Bound To Cmpd 2
pdb|4AA4|A Chain A, P38alpha Map Kinase Bound To Cmpd 22
pdb|4AAC|A Chain A, P38alpha Map Kinase Bound To Cmpd 29
Length = 365
Score = 50.1 bits (118), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 41/154 (26%), Positives = 71/154 (46%), Gaps = 22/154 (14%)
Query: 286 VWEIDPKHLKFGSKVASGSYGDLYRG--TYCSQDVAIKVLKPERINSDMQKEFAQEVFIM 343
+WE+ P+ + S V SG+YG + T VA+K L + K +E+ ++
Sbjct: 22 IWEV-PERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLL 80
Query: 344 RKVRHKNVVQFIGACTKPPSL------CIVTEFMSGGSVYDYLHKLKGVFKLPSLLK--- 394
+ ++H+NV+ + T SL +VT M L + K L
Sbjct: 81 KHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGA--------DLNNIVKCQKLTDDHV 132
Query: 395 --VAIDVSKGMNYLHQNNIIHRDLKAANLLMDEN 426
+ + +G+ Y+H +IIHRDLK +NL ++E+
Sbjct: 133 QFLIYQILRGLKYIHSADIIHRDLKPSNLAVNED 166
>pdb|3RWP|A Chain A, Discovery Of A Novel, Potent And Selective Inhibitor Of 3-
Phosphoinositide Dependent Kinase (Pdk1)
Length = 311
Score = 50.1 bits (118), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 36/136 (26%), Positives = 61/136 (44%), Gaps = 4/136 (2%)
Query: 294 LKFGSKVASGSYGD--LYRGTYCSQDVAIKVLKPERINSDMQKEF-AQEVFIMRKVRHKN 350
KFG + GS+ L R S++ AIK+L+ I + + + +E +M ++ H
Sbjct: 34 FKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPF 93
Query: 351 VVQFIGACTKPPSLCIVTEFMSGGSVYDYLHKLKGVFKLPSLLKVAIDVSKGMNYLHQNN 410
V+ L + G + Y+ K+ G F ++ + YLH
Sbjct: 94 FVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKI-GSFDETCTRFYTAEIVSALEYLHGKG 152
Query: 411 IIHRDLKAANLLMDEN 426
IIHRDLK N+L++E+
Sbjct: 153 IIHRDLKPENILLNED 168
>pdb|3HRB|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|3MW1|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|2YIS|A Chain A, Triazolopyridine Inhibitors Of P38 Kinase.
pdb|2YIW|A Chain A, Triazolopyridine Inhibitors Of P38 Kinase
Length = 359
Score = 50.1 bits (118), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 41/154 (26%), Positives = 71/154 (46%), Gaps = 22/154 (14%)
Query: 286 VWEIDPKHLKFGSKVASGSYGDLYRG--TYCSQDVAIKVLKPERINSDMQKEFAQEVFIM 343
+WE+ P+ + S V SG+YG + T VA+K L + K +E+ ++
Sbjct: 16 IWEV-PERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLL 74
Query: 344 RKVRHKNVVQFIGACTKPPSL------CIVTEFMSGGSVYDYLHKLKGVFKLPSLLK--- 394
+ ++H+NV+ + T SL +VT M L + K L
Sbjct: 75 KHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGA--------DLNNIVKCQKLTDDHV 126
Query: 395 --VAIDVSKGMNYLHQNNIIHRDLKAANLLMDEN 426
+ + +G+ Y+H +IIHRDLK +NL ++E+
Sbjct: 127 QFLIYQILRGLKYIHSADIIHRDLKPSNLAVNED 160
>pdb|1UU3|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Ly333531
pdb|1UU7|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-2
pdb|1UU8|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-1
pdb|1OKY|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Staurosporine
pdb|1OKZ|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Ucn-01
Length = 310
Score = 50.1 bits (118), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 36/136 (26%), Positives = 61/136 (44%), Gaps = 4/136 (2%)
Query: 294 LKFGSKVASGSYGD--LYRGTYCSQDVAIKVLKPERINSDMQKEF-AQEVFIMRKVRHKN 350
KFG + GS+ L R S++ AIK+L+ I + + + +E +M ++ H
Sbjct: 32 FKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPF 91
Query: 351 VVQFIGACTKPPSLCIVTEFMSGGSVYDYLHKLKGVFKLPSLLKVAIDVSKGMNYLHQNN 410
V+ L + G + Y+ K+ G F ++ + YLH
Sbjct: 92 FVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKI-GSFDETCTRFYTAEIVSALEYLHGKG 150
Query: 411 IIHRDLKAANLLMDEN 426
IIHRDLK N+L++E+
Sbjct: 151 IIHRDLKPENILLNED 166
>pdb|3IOP|A Chain A, Pdk-1 In Complex With The Inhibitor Compound-8i
pdb|3QCQ|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-(3-
Amino-1h-Indazol-6-Yl)-N4-Ethyl-2,4-Pyrimidinediamine
pdb|3QCS|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-[2-
Amino-6-(4-Morpholinyl)-4-Pyrimidinyl]-1h-Indazol-3-
Amine
pdb|3QCX|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-{2-
Amino-6-[(3r)-3-Methyl-4-Morpholinyl]-4-Pyrimidinyl}-1h-
Indazol-3- Amine
pdb|3QCY|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 4-[2-
Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-Pyrimidinyl]-N-
Phenyl-2- Morpholinecarboxamide
pdb|3QD0|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With (2r,5s)-
1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-Pyrimidinyl]-6-
Methyl-N- Phenyl-3-Piperidinecarboxamide
pdb|3QD3|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 1,1- Dimethylethyl
{(3r,6s)-1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-
Pyrimidinyl]-6-Methyl-3-Piperidinyl}carbamate
pdb|3QD4|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 1,1-
Dimethylethyl{(3r,
5r)-1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-
Pyrimidinyl]-5-Methyl-3-Piperidinyl}carbamate
Length = 312
Score = 50.1 bits (118), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 36/136 (26%), Positives = 61/136 (44%), Gaps = 4/136 (2%)
Query: 294 LKFGSKVASGSYGD--LYRGTYCSQDVAIKVLKPERINSDMQKEF-AQEVFIMRKVRHKN 350
KFG + GS+ L R S++ AIK+L+ I + + + +E +M ++ H
Sbjct: 35 FKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPF 94
Query: 351 VVQFIGACTKPPSLCIVTEFMSGGSVYDYLHKLKGVFKLPSLLKVAIDVSKGMNYLHQNN 410
V+ L + G + Y+ K+ G F ++ + YLH
Sbjct: 95 FVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKI-GSFDETCTRFYTAEIVSALEYLHGKG 153
Query: 411 IIHRDLKAANLLMDEN 426
IIHRDLK N+L++E+
Sbjct: 154 IIHRDLKPENILLNED 169
>pdb|3O8P|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
pdb|3MPA|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 50.1 bits (118), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 41/154 (26%), Positives = 71/154 (46%), Gaps = 22/154 (14%)
Query: 286 VWEIDPKHLKFGSKVASGSYGDLYRG--TYCSQDVAIKVLKPERINSDMQKEFAQEVFIM 343
+WE+ P+ + S V SG+YG + T VA+K L + K +E+ ++
Sbjct: 17 IWEV-PERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLL 75
Query: 344 RKVRHKNVVQFIGACTKPPSL------CIVTEFMSGGSVYDYLHKLKGVFKLPSLLK--- 394
+ ++H+NV+ + T SL +VT M L + K L
Sbjct: 76 KHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGA--------DLNNIVKCQKLTDDHV 127
Query: 395 --VAIDVSKGMNYLHQNNIIHRDLKAANLLMDEN 426
+ + +G+ Y+H +IIHRDLK +NL ++E+
Sbjct: 128 QFLIYQILRGLKYIHSADIIHRDLKPSNLAVNED 161
>pdb|1ZZL|A Chain A, Crystal Structure Of P38 With Triazolopyridine
pdb|2YIX|A Chain A, Triazolopyridine Inhibitors Of P38
Length = 351
Score = 50.1 bits (118), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 41/154 (26%), Positives = 71/154 (46%), Gaps = 22/154 (14%)
Query: 286 VWEIDPKHLKFGSKVASGSYGDLYRG--TYCSQDVAIKVLKPERINSDMQKEFAQEVFIM 343
+WE+ P+ + S V SG+YG + T VA+K L + K +E+ ++
Sbjct: 14 IWEV-PERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLL 72
Query: 344 RKVRHKNVVQFIGACTKPPSL------CIVTEFMSGGSVYDYLHKLKGVFKLPSLLK--- 394
+ ++H+NV+ + T SL +VT M L + K L
Sbjct: 73 KHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGA--------DLNNIVKCQKLTDDHV 124
Query: 395 --VAIDVSKGMNYLHQNNIIHRDLKAANLLMDEN 426
+ + +G+ Y+H +IIHRDLK +NL ++E+
Sbjct: 125 QFLIYQILRGLKYIHSADIIHRDLKPSNLAVNED 158
>pdb|1OZ1|A Chain A, P38 Mitogen-Activated Kinase In Complex With 4-Azaindole
Inhibitor
Length = 372
Score = 50.1 bits (118), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 41/154 (26%), Positives = 71/154 (46%), Gaps = 22/154 (14%)
Query: 286 VWEIDPKHLKFGSKVASGSYGDLYRG--TYCSQDVAIKVLKPERINSDMQKEFAQEVFIM 343
+WE+ P+ + S V SG+YG + T VA+K L + K +E+ ++
Sbjct: 29 IWEV-PERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLL 87
Query: 344 RKVRHKNVVQFIGACTKPPSL------CIVTEFMSGGSVYDYLHKLKGVFKLPSLLK--- 394
+ ++H+NV+ + T SL +VT M L + K L
Sbjct: 88 KHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGA--------DLNNIVKCQKLTDDHV 139
Query: 395 --VAIDVSKGMNYLHQNNIIHRDLKAANLLMDEN 426
+ + +G+ Y+H +IIHRDLK +NL ++E+
Sbjct: 140 QFLIYQILRGLKYIHSADIIHRDLKPSNLAVNED 173
>pdb|3NNX|A Chain A, Crystal Structure Of Phosphorylated P38 Alpha In Complex
With Dp802
Length = 354
Score = 50.1 bits (118), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 41/154 (26%), Positives = 71/154 (46%), Gaps = 22/154 (14%)
Query: 286 VWEIDPKHLKFGSKVASGSYGDLYRG--TYCSQDVAIKVLKPERINSDMQKEFAQEVFIM 343
+WE+ P+ + S V SG+YG + T VA+K L + K +E+ ++
Sbjct: 17 IWEV-PERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLL 75
Query: 344 RKVRHKNVVQFIGACTKPPSL------CIVTEFMSGGSVYDYLHKLKGVFKLPSLLK--- 394
+ ++H+NV+ + T SL +VT M L + K L
Sbjct: 76 KHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGA--------DLNNIVKCQKLTDDHV 127
Query: 395 --VAIDVSKGMNYLHQNNIIHRDLKAANLLMDEN 426
+ + +G+ Y+H +IIHRDLK +NL ++E+
Sbjct: 128 QFLIYQILRGLKYIHSADIIHRDLKPSNLAVNED 161
>pdb|2GFS|A Chain A, P38 Kinase Crystal Structure In Complex With Ro3201195
pdb|3FKL|A Chain A, P38 Kinase Crystal Structure In Complex With Ro9552
pdb|3FKN|A Chain A, P38 Kinase Crystal Structure In Complex With Ro7125
pdb|3FL4|A Chain A, P38 Kinase Crystal Structure In Complex With Ro5634
pdb|3FLQ|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-((S)-2-Methanesulfonyl-1-Methyl-
Ethylamino)-8-Methyl-8h-Pyrido[2,3-D]pyrimidin
pdb|3FLS|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-((R)-2-Methanesulfonyl-1-Methyl-
Ethylamino)-8-Methyl-8h-Pyrido[2,3-D]pyrimidin-7-One
pdb|3FLW|A Chain A, P38 Kinase Crystal Structure In Complex With Pamapimod
pdb|3FLY|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-Isopropylamino-8-Methyl-8h-Pyrido[2,
3- D]pyrimidin-7-One
pdb|3FLZ|A Chain A, P38 Kinase Crystal Structure In Complex With
8-Methyl-6-Phenoxy-2-
(Tetrahydro-Pyran-4-Ylamino)-8h-Pyrido[2,
3-D]pyrimidin-7-One
pdb|3FMH|A Chain A, P38 Kinase Crystal Structure In Complex With
6-(2,4-Difluoro-Phenoxy)-
8-Methyl-2-((R)-1-Methyl-2-Tetrazol-2-Yl-Ethylamino)-8h-
Pyrido[2,3- D]pyrimidin-7-One
pdb|3FMJ|A Chain A, P38 Kinase Crystal Structure In Complex With
4-(5-Methyl-3-Phenyl- Isoxazol-4-Yl)-Pyrimidin-2-Ylamine
pdb|3FMK|A Chain A, P38 Kinase Crystal Structure In Complex With
6-(2,4-Difluoro-Phenoxy)-
8-Methyl-2-((S)-1-Methyl-2-Tetrazol-2-Yl-Ethylamino)-8h-
Pyrido[2,3- D]pyrimidin-7-One
pdb|3FML|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6224
pdb|3FMM|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6226
pdb|3FMN|A Chain A, P38 Kinase Crystal Structure In Complex With Ro2530
pdb|3FSF|A Chain A, P38 Kinase Crystal Structure In Complex With 3-(2,6-
Dichloro-Phenyl)-7-[4-(2-Diethylamino-Ethoxy)-
Phenylamino]-
1-Methyl-3,4-Dihydro-1h-Pyrimido[4,5-D]pyrimidin-2-One
pdb|3FSK|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6257
Length = 372
Score = 50.1 bits (118), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 41/154 (26%), Positives = 71/154 (46%), Gaps = 22/154 (14%)
Query: 286 VWEIDPKHLKFGSKVASGSYGDLYRG--TYCSQDVAIKVLKPERINSDMQKEFAQEVFIM 343
+WE+ P+ + S V SG+YG + T VA+K L + K +E+ ++
Sbjct: 29 IWEV-PERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLL 87
Query: 344 RKVRHKNVVQFIGACTKPPSL------CIVTEFMSGGSVYDYLHKLKGVFKLPSLLK--- 394
+ ++H+NV+ + T SL +VT M L + K L
Sbjct: 88 KHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGA--------DLNNIVKCQKLTDDHV 139
Query: 395 --VAIDVSKGMNYLHQNNIIHRDLKAANLLMDEN 426
+ + +G+ Y+H +IIHRDLK +NL ++E+
Sbjct: 140 QFLIYQILRGLKYIHSADIIHRDLKPSNLAVNED 173
>pdb|1GZK|A Chain A, Molecular Mechanism For The Regulation Of Protein Kinase B
Akt By Hydrophobic Motif Phosphorylation
pdb|1GZO|A Chain A, Structure Of Protein Kinase B Unphosphorylated
Length = 315
Score = 50.1 bits (118), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 32/130 (24%), Positives = 62/130 (47%), Gaps = 4/130 (3%)
Query: 300 VASGSYGD--LYRGTYCSQDVAIKVLKPERI-NSDMQKEFAQEVFIMRKVRHKNVVQFIG 356
+ G++G L R + A+K+L+ E I D E +++ RH +
Sbjct: 13 LGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRHPFLTALKY 72
Query: 357 ACTKPPSLCIVTEFMSGGSVYDYLHKLKGVFKLPSLLKVAIDVSKGMNYLHQNNIIHRDL 416
A LC V E+ +GG ++ +L + + VF ++ + YLH ++++RD+
Sbjct: 73 AFQTHDRLCFVMEYANGGELFFHLSRER-VFTEERARFYGAEIVSALEYLHSRDVVYRDI 131
Query: 417 KAANLLMDEN 426
K NL++D++
Sbjct: 132 KLENLMLDKD 141
>pdb|3PWY|A Chain A, Crystal Structure Of An Extender (Spd28345)-Modified Human
Pdk1 Complex 2
Length = 311
Score = 50.1 bits (118), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 36/136 (26%), Positives = 61/136 (44%), Gaps = 4/136 (2%)
Query: 294 LKFGSKVASGSYGD--LYRGTYCSQDVAIKVLKPERINSDMQKEF-AQEVFIMRKVRHKN 350
KFG + GS+ L R S++ AIK+L+ I + + + +E +M ++ H
Sbjct: 34 FKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPF 93
Query: 351 VVQFIGACTKPPSLCIVTEFMSGGSVYDYLHKLKGVFKLPSLLKVAIDVSKGMNYLHQNN 410
V+ L + G + Y+ K+ G F ++ + YLH
Sbjct: 94 FVKLYFTFQDDEKLYFGLSYAKNGCLLKYIRKI-GSFDETCTRFYTAEIVSALEYLHGKG 152
Query: 411 IIHRDLKAANLLMDEN 426
IIHRDLK N+L++E+
Sbjct: 153 IIHRDLKPENILLNED 168
>pdb|3NNU|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp1376
pdb|3NNV|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp437
pdb|3NNW|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp802
Length = 354
Score = 50.1 bits (118), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 41/154 (26%), Positives = 71/154 (46%), Gaps = 22/154 (14%)
Query: 286 VWEIDPKHLKFGSKVASGSYGDLYRG--TYCSQDVAIKVLKPERINSDMQKEFAQEVFIM 343
+WE+ P+ + S V SG+YG + T VA+K L + K +E+ ++
Sbjct: 17 IWEV-PERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLL 75
Query: 344 RKVRHKNVVQFIGACTKPPSL------CIVTEFMSGGSVYDYLHKLKGVFKLPSLLK--- 394
+ ++H+NV+ + T SL +VT M L + K L
Sbjct: 76 KHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGA--------DLNNIVKCQKLTDDHV 127
Query: 395 --VAIDVSKGMNYLHQNNIIHRDLKAANLLMDEN 426
+ + +G+ Y+H +IIHRDLK +NL ++E+
Sbjct: 128 QFLIYQILRGLKYIHSADIIHRDLKPSNLAVNED 161
>pdb|1A06|A Chain A, Calmodulin-Dependent Protein Kinase From Rat
Length = 332
Score = 50.1 bits (118), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 31/112 (27%), Positives = 56/112 (50%), Gaps = 5/112 (4%)
Query: 318 VAIKVLKPERINSDMQKEFAQEVFIMRKVRHKNVVQFIGACTKPPSLCIVTEFMSGGSVY 377
VAIK + + + + E+ ++ K++H N+V L ++ + +SGG ++
Sbjct: 46 VAIKCIAKKALEGK-EGSMENEIAVLHKIKHPNIVALDDIYESGGHLYLIMQLVSGGELF 104
Query: 378 DYLHKLKGVFKLPSLLKVAIDVSKGMNYLHQNNIIHRDLKAANLL---MDEN 426
D + + KG + ++ V + YLH I+HRDLK NLL +DE+
Sbjct: 105 DRIVE-KGFYTERDASRLIFQVLDAVKYLHDLGIVHRDLKPENLLYYSLDED 155
>pdb|3ORX|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|B Chain B, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|C Chain C, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|D Chain D, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|E Chain E, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|F Chain F, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|G Chain G, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|H Chain H, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORZ|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|B Chain B, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|C Chain C, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|D Chain D, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3OTU|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator Js30
Length = 316
Score = 50.1 bits (118), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 36/136 (26%), Positives = 61/136 (44%), Gaps = 4/136 (2%)
Query: 294 LKFGSKVASGSYGD--LYRGTYCSQDVAIKVLKPERINSDMQKEF-AQEVFIMRKVRHKN 350
KFG + GS+ L R S++ AIK+L+ I + + + +E +M ++ H
Sbjct: 39 FKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPF 98
Query: 351 VVQFIGACTKPPSLCIVTEFMSGGSVYDYLHKLKGVFKLPSLLKVAIDVSKGMNYLHQNN 410
V+ L + G + Y+ K+ G F ++ + YLH
Sbjct: 99 FVKLYFCFQDDEKLYFGLSYAKNGELLKYIRKI-GSFDETCTRFYTAEIVSALEYLHGKG 157
Query: 411 IIHRDLKAANLLMDEN 426
IIHRDLK N+L++E+
Sbjct: 158 IIHRDLKPENILLNED 173
>pdb|3H9O|A Chain A, Phosphoinositide-Dependent Protein Kinase 1 (Pdk-1) In
Complex With Compound 9
Length = 311
Score = 50.1 bits (118), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 36/136 (26%), Positives = 61/136 (44%), Gaps = 4/136 (2%)
Query: 294 LKFGSKVASGSYGD--LYRGTYCSQDVAIKVLKPERINSDMQKEF-AQEVFIMRKVRHKN 350
KFG + GS+ L R S++ AIK+L+ I + + + +E +M ++ H
Sbjct: 34 FKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPF 93
Query: 351 VVQFIGACTKPPSLCIVTEFMSGGSVYDYLHKLKGVFKLPSLLKVAIDVSKGMNYLHQNN 410
V+ L + G + Y+ K+ G F ++ + YLH
Sbjct: 94 FVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKI-GSFDETCTRFYTAEIVSALEYLHGKG 152
Query: 411 IIHRDLKAANLLMDEN 426
IIHRDLK N+L++E+
Sbjct: 153 IIHRDLKPENILLNED 168
>pdb|3HRC|A Chain A, Crystal Structure Of A Mutant Of Human Pdk1 Kinase Domain
In Complex With Atp
pdb|3HRF|A Chain A, Crystal Structure Of Human Pdk1 Kinase Domain In Complex
With An Allosteric Activator Bound To The Pif-Pocket
pdb|3RCJ|A Chain A, Rapid Preparation Of Triazolyl Substituted Nh-Heterocyclic
Kinase Inhibitors Via One-Pot Sonogashira Coupling
Tms-Deprotection Cuaac Sequence
pdb|4A06|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Activator Ps114 Bound To The Pif-Pocket
pdb|4AW1|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Compound Ps210 Bound To The Pif-Pocket
Length = 311
Score = 50.1 bits (118), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 36/136 (26%), Positives = 61/136 (44%), Gaps = 4/136 (2%)
Query: 294 LKFGSKVASGSYGD--LYRGTYCSQDVAIKVLKPERINSDMQKEF-AQEVFIMRKVRHKN 350
KFG + GS+ L R S++ AIK+L+ I + + + +E +M ++ H
Sbjct: 34 FKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPF 93
Query: 351 VVQFIGACTKPPSLCIVTEFMSGGSVYDYLHKLKGVFKLPSLLKVAIDVSKGMNYLHQNN 410
V+ L + G + Y+ K+ G F ++ + YLH
Sbjct: 94 FVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKI-GSFDETCTRFYTAEIVSALEYLHGKG 152
Query: 411 IIHRDLKAANLLMDEN 426
IIHRDLK N+L++E+
Sbjct: 153 IIHRDLKPENILLNED 168
>pdb|2FSO|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a)
Activating Mutant
Length = 367
Score = 50.1 bits (118), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 41/154 (26%), Positives = 71/154 (46%), Gaps = 22/154 (14%)
Query: 286 VWEIDPKHLKFGSKVASGSYGDLYRG--TYCSQDVAIKVLKPERINSDMQKEFAQEVFIM 343
+WE+ P+ + S V SG+YG + T VA+K L + K +E+ ++
Sbjct: 24 IWEV-PERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLL 82
Query: 344 RKVRHKNVVQFIGACTKPPSL------CIVTEFMSGGSVYDYLHKLKGVFKLPSLLK--- 394
+ ++H+NV+ + T SL +VT M L + K L
Sbjct: 83 KHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGA--------DLNNIVKCQKLTDDHV 134
Query: 395 --VAIDVSKGMNYLHQNNIIHRDLKAANLLMDEN 426
+ + +G+ Y+H +IIHRDLK +NL ++E+
Sbjct: 135 QFLIYQILRGLKYIHSADIIHRDLKPSNLAVNED 168
>pdb|3NUN|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Lead
Compound
Length = 292
Score = 50.1 bits (118), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 36/136 (26%), Positives = 61/136 (44%), Gaps = 4/136 (2%)
Query: 294 LKFGSKVASGSYGD--LYRGTYCSQDVAIKVLKPERINSDMQKEF-AQEVFIMRKVRHKN 350
KFG + GS+ L R S++ AIK+L+ I + + + +E +M ++ H
Sbjct: 16 FKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPF 75
Query: 351 VVQFIGACTKPPSLCIVTEFMSGGSVYDYLHKLKGVFKLPSLLKVAIDVSKGMNYLHQNN 410
V+ L + G + Y+ K+ G F ++ + YLH
Sbjct: 76 FVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKI-GSFDETCTRFYTAEIVSALEYLHGKG 134
Query: 411 IIHRDLKAANLLMDEN 426
IIHRDLK N+L++E+
Sbjct: 135 IIHRDLKPENILLNED 150
>pdb|2R7B|A Chain A, Crystal Structure Of The Phosphoinositide-Dependent
Kinase- 1 (Pdk-1)catalytic Domain Bound To A
Dibenzonaphthyridine Inhibitor
pdb|3ION|A Chain A, Pdk1 In Complex With Compound 8h
Length = 312
Score = 50.1 bits (118), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 36/136 (26%), Positives = 61/136 (44%), Gaps = 4/136 (2%)
Query: 294 LKFGSKVASGSYGD--LYRGTYCSQDVAIKVLKPERINSDMQKEF-AQEVFIMRKVRHKN 350
KFG + GS+ L R S++ AIK+L+ I + + + +E +M ++ H
Sbjct: 35 FKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPF 94
Query: 351 VVQFIGACTKPPSLCIVTEFMSGGSVYDYLHKLKGVFKLPSLLKVAIDVSKGMNYLHQNN 410
V+ L + G + Y+ K+ G F ++ + YLH
Sbjct: 95 FVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKI-GSFDETCTRFYTAEIVSALEYLHGKG 153
Query: 411 IIHRDLKAANLLMDEN 426
IIHRDLK N+L++E+
Sbjct: 154 IIHRDLKPENILLNED 169
>pdb|2FST|X Chain X, Mitogen Activated Protein Kinase P38alpha (d176a+f327l)
Activating Mutant
Length = 367
Score = 50.1 bits (118), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 41/154 (26%), Positives = 71/154 (46%), Gaps = 22/154 (14%)
Query: 286 VWEIDPKHLKFGSKVASGSYGDLYRG--TYCSQDVAIKVLKPERINSDMQKEFAQEVFIM 343
+WE+ P+ + S V SG+YG + T VA+K L + K +E+ ++
Sbjct: 24 IWEV-PERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLL 82
Query: 344 RKVRHKNVVQFIGACTKPPSL------CIVTEFMSGGSVYDYLHKLKGVFKLPSLLK--- 394
+ ++H+NV+ + T SL +VT M L + K L
Sbjct: 83 KHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGA--------DLNNIVKCQKLTDDHV 134
Query: 395 --VAIDVSKGMNYLHQNNIIHRDLKAANLLMDEN 426
+ + +G+ Y+H +IIHRDLK +NL ++E+
Sbjct: 135 QFLIYQILRGLKYIHSADIIHRDLKPSNLAVNED 168
>pdb|3QC4|A Chain A, Pdk1 In Complex With Dfg-Out Inhibitor Xxx
pdb|3QC4|B Chain B, Pdk1 In Complex With Dfg-Out Inhibitor Xxx
Length = 314
Score = 50.1 bits (118), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 36/136 (26%), Positives = 61/136 (44%), Gaps = 4/136 (2%)
Query: 294 LKFGSKVASGSYGD--LYRGTYCSQDVAIKVLKPERINSDMQKEF-AQEVFIMRKVRHKN 350
KFG + GS+ L R S++ AIK+L+ I + + + +E +M ++ H
Sbjct: 37 FKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPF 96
Query: 351 VVQFIGACTKPPSLCIVTEFMSGGSVYDYLHKLKGVFKLPSLLKVAIDVSKGMNYLHQNN 410
V+ L + G + Y+ K+ G F ++ + YLH
Sbjct: 97 FVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKI-GSFDETCTRFYTAEIVSALEYLHGKG 155
Query: 411 IIHRDLKAANLLMDEN 426
IIHRDLK N+L++E+
Sbjct: 156 IIHRDLKPENILLNED 171
>pdb|3MBL|A Chain A, Crystal Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek 1) In Complex With Ligand And Mgadp
pdb|3PP1|A Chain A, Crystal Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek 1) In Complex With Ligand And Mgatp
Length = 328
Score = 50.1 bits (118), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 42/145 (28%), Positives = 75/145 (51%), Gaps = 6/145 (4%)
Query: 298 SKVASGSYGDLYRGTY-CSQDVAIKVLKPERINSDMQKEFAQEVFIMRKVRHKNVVQFIG 356
S++ +G+ G +++ ++ S V + L I ++ + +E+ ++ + +V F G
Sbjct: 12 SELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSPYIVGFYG 71
Query: 357 ACTKPPSLCIVTEFMSGGSVYDYLHKLKGVFKLPSLLKVAIDVSKGMNYLHQ-NNIIHRD 415
A + I E M GGS+ D + K G L KV+I V KG+ YL + + I+HRD
Sbjct: 72 AFYSDGEISICMEHMDGGSL-DQVLKKAGRIPEQILGKVSIAVIKGLTYLREKHKIMHRD 130
Query: 416 LKAANLLMDENEVSLLLSLCLFTVS 440
+K +N+L++ + LC F VS
Sbjct: 131 VKPSNILVNSRGE---IKLCDFGVS 152
>pdb|3DV3|A Chain A, Mek1 With Pf-04622664 Bound
Length = 322
Score = 50.1 bits (118), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 42/145 (28%), Positives = 75/145 (51%), Gaps = 6/145 (4%)
Query: 298 SKVASGSYGDLYRGTY-CSQDVAIKVLKPERINSDMQKEFAQEVFIMRKVRHKNVVQFIG 356
S++ +G+ G +++ ++ S V + L I ++ + +E+ ++ + +V F G
Sbjct: 12 SELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSPYIVGFYG 71
Query: 357 ACTKPPSLCIVTEFMSGGSVYDYLHKLKGVFKLPSLLKVAIDVSKGMNYLHQ-NNIIHRD 415
A + I E M GGS+ D + K G L KV+I V KG+ YL + + I+HRD
Sbjct: 72 AFYSDGEISICMEHMDGGSL-DQVLKKAGRIPEQILGKVSIAVIKGLTYLREKHKIMHRD 130
Query: 416 LKAANLLMDENEVSLLLSLCLFTVS 440
+K +N+L++ + LC F VS
Sbjct: 131 VKPSNILVNSRGE---IKLCDFGVS 152
>pdb|3ZGW|A Chain A, Crystal Structure Of Maternal Embryonic Leucine Zipper
Kinase (melk) In Complex With Amp-pnp
Length = 347
Score = 50.1 bits (118), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 32/144 (22%), Positives = 64/144 (44%), Gaps = 20/144 (13%)
Query: 292 KHLKFGSKVASGSYGDLYRGTY--CSQDVAIKVLKPERINSDMQKEFAQEVFIMRKVRHK 349
K+ + + +G + + + + VAIK++ + SD+ + E+ ++ +RH+
Sbjct: 10 KYYELHETIGTGGFAKVKLACHILTGEMVAIKIMDKNTLGSDLPR-IKTEIEALKNLRHQ 68
Query: 350 NVVQFIGACTKPPSLCIVTEFMSGGSVYDYL--------HKLKGVFKLPSLLKVAIDVSK 401
++ Q + +V E+ GG ++DY+ + + VF+ +
Sbjct: 69 HICQLYHVLETANKIFMVLEYCPGGELFDYIISQDRLSEEETRVVFR---------QIVS 119
Query: 402 GMNYLHQNNIIHRDLKAANLLMDE 425
+ Y+H HRDLK NLL DE
Sbjct: 120 AVAYVHSQGYAHRDLKPENLLFDE 143
>pdb|3E92|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biaryl
Amide Inhibitor
pdb|3E93|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biaryl
Amide Inhibitor
Length = 371
Score = 50.1 bits (118), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 41/154 (26%), Positives = 71/154 (46%), Gaps = 22/154 (14%)
Query: 286 VWEIDPKHLKFGSKVASGSYGDLYRG--TYCSQDVAIKVLKPERINSDMQKEFAQEVFIM 343
+WE+ P+ + S V SG+YG + T VA+K L + K +E+ ++
Sbjct: 28 IWEV-PERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLL 86
Query: 344 RKVRHKNVVQFIGACTKPPSL------CIVTEFMSGGSVYDYLHKLKGVFKLPSLLK--- 394
+ ++H+NV+ + T SL +VT M L + K L
Sbjct: 87 KHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGA--------DLNNIVKCQKLTDDHV 138
Query: 395 --VAIDVSKGMNYLHQNNIIHRDLKAANLLMDEN 426
+ + +G+ Y+H +IIHRDLK +NL ++E+
Sbjct: 139 QFLIYQILRGLKYIHSADIIHRDLKPSNLAVNED 172
>pdb|3OEF|X Chain X, Crystal Structure Of Y323f Inactive Mutant Of P38alpha Map
Kinase
Length = 360
Score = 50.1 bits (118), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 41/154 (26%), Positives = 71/154 (46%), Gaps = 22/154 (14%)
Query: 286 VWEIDPKHLKFGSKVASGSYGDLYRG--TYCSQDVAIKVLKPERINSDMQKEFAQEVFIM 343
+WE+ P+ + S V SG+YG + T VA+K L + K +E+ ++
Sbjct: 17 IWEV-PERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLL 75
Query: 344 RKVRHKNVVQFIGACTKPPSL------CIVTEFMSGGSVYDYLHKLKGVFKLPSLLK--- 394
+ ++H+NV+ + T SL +VT M L + K L
Sbjct: 76 KHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGA--------DLNNIVKCQKLTDDHV 127
Query: 395 --VAIDVSKGMNYLHQNNIIHRDLKAANLLMDEN 426
+ + +G+ Y+H +IIHRDLK +NL ++E+
Sbjct: 128 QFLIYQILRGLKYIHSADIIHRDLKPSNLAVNED 161
>pdb|3K3I|A Chain A, P38alpha Bound To Novel Dgf-Out Compound Pf-00215955
Length = 350
Score = 50.1 bits (118), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 41/154 (26%), Positives = 71/154 (46%), Gaps = 22/154 (14%)
Query: 286 VWEIDPKHLKFGSKVASGSYGDLYRG--TYCSQDVAIKVLKPERINSDMQKEFAQEVFIM 343
+WE+ P+ + S V SG+YG + T VA+K L + K +E+ ++
Sbjct: 15 IWEV-PERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLL 73
Query: 344 RKVRHKNVVQFIGACTKPPSL------CIVTEFMSGGSVYDYLHKLKGVFKLPSLLK--- 394
+ ++H+NV+ + T SL +VT M L + K L
Sbjct: 74 KHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGA--------DLNNIVKCQKLTDDHV 125
Query: 395 --VAIDVSKGMNYLHQNNIIHRDLKAANLLMDEN 426
+ + +G+ Y+H +IIHRDLK +NL ++E+
Sbjct: 126 QFLIYQILRGLKYIHSADIIHRDLKPSNLAVNED 159
>pdb|3S3I|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
Length = 349
Score = 50.1 bits (118), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 41/154 (26%), Positives = 71/154 (46%), Gaps = 22/154 (14%)
Query: 286 VWEIDPKHLKFGSKVASGSYGDLYRG--TYCSQDVAIKVLKPERINSDMQKEFAQEVFIM 343
+WE+ P+ + S V SG+YG + T VA+K L + K +E+ ++
Sbjct: 14 IWEV-PERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLL 72
Query: 344 RKVRHKNVVQFIGACTKPPSL------CIVTEFMSGGSVYDYLHKLKGVFKLPSLLK--- 394
+ ++H+NV+ + T SL +VT M L + K L
Sbjct: 73 KHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGA--------DLNNIVKCQKLTDDHV 124
Query: 395 --VAIDVSKGMNYLHQNNIIHRDLKAANLLMDEN 426
+ + +G+ Y+H +IIHRDLK +NL ++E+
Sbjct: 125 QFLIYQILRGLKYIHSADIIHRDLKPSNLAVNED 158
>pdb|3NAX|A Chain A, Pdk1 In Complex With Inhibitor Mp7
Length = 311
Score = 50.1 bits (118), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 36/136 (26%), Positives = 61/136 (44%), Gaps = 4/136 (2%)
Query: 294 LKFGSKVASGSYGD--LYRGTYCSQDVAIKVLKPERINSDMQKEF-AQEVFIMRKVRHKN 350
KFG + GS+ L R S++ AIK+L+ I + + + +E +M ++ H
Sbjct: 31 FKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPF 90
Query: 351 VVQFIGACTKPPSLCIVTEFMSGGSVYDYLHKLKGVFKLPSLLKVAIDVSKGMNYLHQNN 410
V+ L + G + Y+ K+ G F ++ + YLH
Sbjct: 91 FVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKI-GSFDETCTRFYTAEIVSALEYLHGKG 149
Query: 411 IIHRDLKAANLLMDEN 426
IIHRDLK N+L++E+
Sbjct: 150 IIHRDLKPENILLNED 165
>pdb|2IW6|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW6|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW9|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW9|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
Length = 302
Score = 50.1 bits (118), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 31/129 (24%), Positives = 64/129 (49%), Gaps = 4/129 (3%)
Query: 299 KVASGSYGDLY--RGTYCSQDVAIKVLKPERINSDMQKEFAQEVFIMRKVRHKNVVQFIG 356
K+ G+YG +Y R + VA+K ++ + + +E+ +++++ H N+V+ +
Sbjct: 13 KIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLD 72
Query: 357 ACTKPPSLCIVTEFMSGG-SVYDYLHKLKGVFKLPSLLKVAIDVSKGMNYLHQNNIIHRD 415
L +V EF+ + L G+ LP + + +G+ + H + ++HRD
Sbjct: 73 VIHTENKLYLVFEFLHQDLKTFMDASALTGI-PLPLIKSYLFQLLQGLAFCHSHRVLHRD 131
Query: 416 LKAANLLMD 424
LK NLL++
Sbjct: 132 LKPQNLLIN 140
>pdb|3HEC|A Chain A, P38 In Complex With Imatinib
pdb|3HEG|A Chain A, P38 In Complex With Sorafenib
Length = 348
Score = 50.1 bits (118), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 41/154 (26%), Positives = 71/154 (46%), Gaps = 22/154 (14%)
Query: 286 VWEIDPKHLKFGSKVASGSYGDLYRG--TYCSQDVAIKVLKPERINSDMQKEFAQEVFIM 343
+WE+ P+ + S V SG+YG + T VA+K L + K +E+ ++
Sbjct: 13 IWEV-PERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLL 71
Query: 344 RKVRHKNVVQFIGACTKPPSL------CIVTEFMSGGSVYDYLHKLKGVFKLPSLLK--- 394
+ ++H+NV+ + T SL +VT M L + K L
Sbjct: 72 KHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGA--------DLNNIVKCQKLTDDHV 123
Query: 395 --VAIDVSKGMNYLHQNNIIHRDLKAANLLMDEN 426
+ + +G+ Y+H +IIHRDLK +NL ++E+
Sbjct: 124 QFLIYQILRGLKYIHSADIIHRDLKPSNLAVNED 157
>pdb|3SC1|A Chain A, Novel Isoquinolone Pdk1 Inhibitors Discovered Through
Fragment-Based Lead Discovery
pdb|3RWQ|A Chain A, Discovery Of A Novel, Potent And Selective Inhibitor Of 3-
Phosphoinositide Dependent Kinase (Pdk1)
Length = 311
Score = 50.1 bits (118), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 36/136 (26%), Positives = 61/136 (44%), Gaps = 4/136 (2%)
Query: 294 LKFGSKVASGSYGD--LYRGTYCSQDVAIKVLKPERINSDMQKEF-AQEVFIMRKVRHKN 350
KFG + GS+ L R S++ AIK+L+ I + + + +E +M ++ H
Sbjct: 34 FKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPF 93
Query: 351 VVQFIGACTKPPSLCIVTEFMSGGSVYDYLHKLKGVFKLPSLLKVAIDVSKGMNYLHQNN 410
V+ L + G + Y+ K+ G F ++ + YLH
Sbjct: 94 FVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKI-GSFDETCTRFYTAEIVSALEYLHGKG 152
Query: 411 IIHRDLKAANLLMDEN 426
IIHRDLK N+L++E+
Sbjct: 153 IIHRDLKPENILLNED 168
>pdb|2GNG|A Chain A, Protein Kinase A Fivefold Mutant Model Of Rho-Kinase
pdb|2GNH|A Chain A, Pka Five Fold Mutant Model Of Rho-Kinase With H1152p
pdb|2GNI|A Chain A, Pka Fivefold Mutant Model Of Rho-Kinase With Inhibitor
Fasudil (Ha1077)
Length = 350
Score = 50.1 bits (118), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 36/130 (27%), Positives = 64/130 (49%), Gaps = 4/130 (3%)
Query: 300 VASGSYGD--LYRGTYCSQDVAIKVLKPERINSDMQKEFA-QEVFIMRKVRHKNVVQFIG 356
+ +GS+G L + A+K+L +++ Q E E I++ V +V+
Sbjct: 49 IGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEF 108
Query: 357 ACTKPPSLCIVTEFMSGGSVYDYLHKLKGVFKLPSLLKVAIDVSKGMNYLHQNNIIHRDL 416
+ +L +V E+M GG ++ +L ++ G F P A + YLH ++I+RDL
Sbjct: 109 SFKDNSNLYMVMEYMPGGDMFSHLRRI-GRFSEPHARFYAAQIVLTFEYLHSLDLIYRDL 167
Query: 417 KAANLLMDEN 426
K NLL+D+
Sbjct: 168 KPENLLIDQQ 177
>pdb|3MPT|A Chain A, Crystal Structure Of P38 Kinase In Complex With A
Pyrrole-2- Carboxamide Inhibitor
Length = 371
Score = 50.1 bits (118), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 41/154 (26%), Positives = 71/154 (46%), Gaps = 22/154 (14%)
Query: 286 VWEIDPKHLKFGSKVASGSYGDLYRG--TYCSQDVAIKVLKPERINSDMQKEFAQEVFIM 343
+WE+ P+ + S V SG+YG + T VA+K L + K +E+ ++
Sbjct: 28 IWEV-PERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLL 86
Query: 344 RKVRHKNVVQFIGACTKPPSL------CIVTEFMSGGSVYDYLHKLKGVFKLPSLLK--- 394
+ ++H+NV+ + T SL +VT M L + K L
Sbjct: 87 KHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGA--------DLNNIVKCQKLTDDHV 138
Query: 395 --VAIDVSKGMNYLHQNNIIHRDLKAANLLMDEN 426
+ + +G+ Y+H +IIHRDLK +NL ++E+
Sbjct: 139 QFLIYQILRGLKYIHSADIIHRDLKPSNLAVNED 172
>pdb|3NAY|A Chain A, Pdk1 In Complex With Inhibitor Mp6
pdb|3NAY|B Chain B, Pdk1 In Complex With Inhibitor Mp6
Length = 311
Score = 50.1 bits (118), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 36/136 (26%), Positives = 61/136 (44%), Gaps = 4/136 (2%)
Query: 294 LKFGSKVASGSYGD--LYRGTYCSQDVAIKVLKPERINSDMQKEF-AQEVFIMRKVRHKN 350
KFG + GS+ L R S++ AIK+L+ I + + + +E +M ++ H
Sbjct: 31 FKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPF 90
Query: 351 VVQFIGACTKPPSLCIVTEFMSGGSVYDYLHKLKGVFKLPSLLKVAIDVSKGMNYLHQNN 410
V+ L + G + Y+ K+ G F ++ + YLH
Sbjct: 91 FVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKI-GSFDETCTRFYTAEIVSALEYLHGKG 149
Query: 411 IIHRDLKAANLLMDEN 426
IIHRDLK N+L++E+
Sbjct: 150 IIHRDLKPENILLNED 165
>pdb|2GNF|A Chain A, Protein Kinase A Fivefold Mutant Model Of Rho-Kinase With
Y- 27632
Length = 350
Score = 50.1 bits (118), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 36/130 (27%), Positives = 64/130 (49%), Gaps = 4/130 (3%)
Query: 300 VASGSYGD--LYRGTYCSQDVAIKVLKPERINSDMQKEFA-QEVFIMRKVRHKNVVQFIG 356
+ +GS+G L + A+K+L +++ Q E E I++ V +V+
Sbjct: 49 IGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEF 108
Query: 357 ACTKPPSLCIVTEFMSGGSVYDYLHKLKGVFKLPSLLKVAIDVSKGMNYLHQNNIIHRDL 416
+ +L +V E+M GG ++ +L ++ G F P A + YLH ++I+RDL
Sbjct: 109 SFKDNSNLYMVMEYMPGGDMFSHLRRI-GRFSEPHARFYAAQIVLTFEYLHSLDLIYRDL 167
Query: 417 KAANLLMDEN 426
K NLL+D+
Sbjct: 168 KPENLLIDQQ 177
>pdb|2BAQ|A Chain A, P38alpha Bound To Ro3201195
Length = 365
Score = 50.1 bits (118), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 40/154 (25%), Positives = 71/154 (46%), Gaps = 22/154 (14%)
Query: 286 VWEIDPKHLKFGSKVASGSYGDLYRG--TYCSQDVAIKVLKPERINSDMQKEFAQEVFIM 343
+WE+ P+ + S + SG+YG + T VA+K L + K +E+ ++
Sbjct: 22 IWEV-PERYQNLSPIGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLL 80
Query: 344 RKVRHKNVVQFIGACTKPPSL------CIVTEFMSGGSVYDYLHKLKGVFKLPSLLK--- 394
+ ++H+NV+ + T SL +VT M L + K L
Sbjct: 81 KHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGA--------DLNNIVKCQKLTDDHV 132
Query: 395 --VAIDVSKGMNYLHQNNIIHRDLKAANLLMDEN 426
+ + +G+ Y+H +IIHRDLK +NL ++E+
Sbjct: 133 QFLIYQILRGLKYIHSADIIHRDLKPSNLAVNED 166
>pdb|2BUJ|A Chain A, Crystal Structure Of The Human Serine-Threonine Kinase 16
In Complex With Staurosporine
pdb|2BUJ|B Chain B, Crystal Structure Of The Human Serine-Threonine Kinase 16
In Complex With Staurosporine
Length = 317
Score = 50.1 bits (118), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 42/175 (24%), Positives = 82/175 (46%), Gaps = 13/175 (7%)
Query: 289 IDPKHLKFGSKVASG--SYGDLYRGTYCSQDVAIK-VLKPERINSDMQKEFAQEVFIMRK 345
ID KH F K+ G SY DL G + A+K +L E+ + ++E +E + R
Sbjct: 26 IDNKHYLFIQKLGEGGFSYVDLVEGLHDGHFYALKRILCHEQQD---REEAQREADMHRL 82
Query: 346 VRHKNVVQFIGACTKPPSL----CIVTEFMSGGSVYDYLHKLK--GVFKLP-SLLKVAID 398
H N+++ + C + ++ F G++++ + +LK G F +L + +
Sbjct: 83 FNHPNILRLVAYCLRERGAKHEAWLLLPFFKRGTLWNEIERLKDKGNFLTEDQILWLLLG 142
Query: 399 VSKGMNYLHQNNIIHRDLKAANLLMDENEVSLLLSLCLFTVSILFCGKGRELISL 453
+ +G+ +H HRDLK N+L+ + +L+ L + + R+ ++L
Sbjct: 143 ICRGLEAIHAKGYAHRDLKPTNILLGDEGQPVLMDLGSMNQACIHVEGSRQALTL 197
>pdb|1VYW|A Chain A, Structure Of Cdk2CYCLIN A WITH PNU-292137
pdb|1VYW|C Chain C, Structure Of Cdk2CYCLIN A WITH PNU-292137
pdb|2C4G|A Chain A, Structure Of Cdk2-Cyclin A With Pha-533514
pdb|2C4G|C Chain C, Structure Of Cdk2-Cyclin A With Pha-533514
pdb|2BPM|A Chain A, Structure Of Cdk2-Cyclin A With Pha-630529
pdb|2BPM|C Chain C, Structure Of Cdk2-Cyclin A With Pha-630529
pdb|2BKZ|A Chain A, Structure Of Cdk2-Cyclin A With Pha-404611
pdb|2BKZ|C Chain C, Structure Of Cdk2-Cyclin A With Pha-404611
pdb|2WIH|A Chain A, Structure Of Cdk2-Cyclin A With Pha-848125
pdb|2WIH|C Chain C, Structure Of Cdk2-Cyclin A With Pha-848125
pdb|2WIP|A Chain A, Structure Of Cdk2-Cyclin A Complexed With 8-Anilino-1-
Methyl-4,5-Dihydro-1h-Pyrazolo[4,3-H] Quinazoline-3-
Carboxylic Acid
pdb|2WIP|C Chain C, Structure Of Cdk2-Cyclin A Complexed With 8-Anilino-1-
Methyl-4,5-Dihydro-1h-Pyrazolo[4,3-H] Quinazoline-3-
Carboxylic Acid
pdb|2WPA|A Chain A, Optimisation Of 6,6-Dimethyl Pyrrolo 3,4-C Pyrazoles:
Identification Of Pha-793887, A Potent Cdk Inhibitor
Suitable For Intravenous Dosing
pdb|2WPA|C Chain C, Optimisation Of 6,6-Dimethyl Pyrrolo 3,4-C Pyrazoles:
Identification Of Pha-793887, A Potent Cdk Inhibitor
Suitable For Intravenous Dosing
pdb|2WXV|A Chain A, Structure Of Cdk2-Cyclin A With A Pyrazolo(4,3-H)
Quinazoline-3-Carboxamide Inhibitor
pdb|2WXV|C Chain C, Structure Of Cdk2-Cyclin A With A Pyrazolo(4,3-H)
Quinazoline-3-Carboxamide Inhibitor
Length = 309
Score = 49.7 bits (117), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 32/139 (23%), Positives = 69/139 (49%), Gaps = 4/139 (2%)
Query: 289 IDPKHLKFGSKVASGSYGDLY--RGTYCSQDVAIKVLKPERINSDMQKEFAQEVFIMRKV 346
+D ++ + K+ G+YG +Y R + VA+K ++ + + +E+ +++++
Sbjct: 4 VDMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKEL 63
Query: 347 RHKNVVQFIGACTKPPSLCIVTEFMSGG-SVYDYLHKLKGVFKLPSLLKVAIDVSKGMNY 405
H N+V+ + L +V EF+ + L G+ LP + + +G+ +
Sbjct: 64 NHPNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGI-PLPLIKSYLFQLLQGLAF 122
Query: 406 LHQNNIIHRDLKAANLLMD 424
H + ++HRDLK NLL++
Sbjct: 123 CHSHRVLHRDLKPQNLLIN 141
>pdb|1OIT|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-dependent Kinase Inhibitors Identified Through
Structure-based Hybridisation
Length = 299
Score = 49.7 bits (117), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 31/129 (24%), Positives = 65/129 (50%), Gaps = 4/129 (3%)
Query: 299 KVASGSYGDLY--RGTYCSQDVAIKVLKPERINSDMQKEFAQEVFIMRKVRHKNVVQFIG 356
K+ G+YG +Y R + VA+K ++ + + +E+ +++++ H N+V+ +
Sbjct: 10 KIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLD 69
Query: 357 ACTKPPSLCIVTEFMSGG-SVYDYLHKLKGVFKLPSLLKVAIDVSKGMNYLHQNNIIHRD 415
L +V EF+ + L G+ LP + + +G+++ H + ++HRD
Sbjct: 70 VIHTENKLYLVFEFLHQDLKKFMDASALTGI-PLPLIKSYLFQLLQGLSFCHSHRVLHRD 128
Query: 416 LKAANLLMD 424
LK NLL++
Sbjct: 129 LKPQNLLIN 137
>pdb|2BFY|A Chain A, Complex Of Aurora-B With Incenp And Hesperidin.
pdb|2BFY|B Chain B, Complex Of Aurora-B With Incenp And Hesperidin
Length = 284
Score = 49.7 bits (117), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 32/127 (25%), Positives = 62/127 (48%), Gaps = 4/127 (3%)
Query: 300 VASGSYGDLY--RGTYCSQDVAIKVLKPERINSD-MQKEFAQEVFIMRKVRHKNVVQFIG 356
+ G +G++Y R +A+KVL ++ + ++ + +E+ I +RH N+++
Sbjct: 22 LGKGKFGNVYLAREKQNKFIMALKVLFKSQLEKEGVEHQLRREIEIQSHLRHPNILRMYN 81
Query: 357 ACTKPPSLCIVTEFMSGGSVYDYLHKLKGVFKLPSLLKVAIDVSKGMNYLHQNNIIHRDL 416
+ ++ EF G +Y L K G F +++ ++Y H+ +IHRD+
Sbjct: 82 YFHDRKRIYLMLEFAPRGELYKELQK-HGRFDEQRSATFMEELADALHYCHERKVIHRDI 140
Query: 417 KAANLLM 423
K NLLM
Sbjct: 141 KPENLLM 147
>pdb|4DC2|A Chain A, Structure Of Pkc In Complex With A Substrate Peptide From
Par-3
Length = 396
Score = 49.7 bits (117), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 37/131 (28%), Positives = 68/131 (51%), Gaps = 9/131 (6%)
Query: 300 VASGSYGD--LYRGTYCSQDVAIKVLKPERINSDMQKEFAQ-EVFIMRKVRHKNVVQFIG 356
+ GSY L R + A++V+K E +N D ++ Q E + + + + +
Sbjct: 60 IGRGSYAKVLLVRLKKTDRIYAMRVVKKELVNDDEDIDWVQTEKHVFEQASNHPFLVGLH 119
Query: 357 ACTKPPS-LCIVTEFMSGGSVYDYLHKLKGVFKLPS--LLKVAIDVSKGMNYLHQNNIIH 413
+C + S L V E+++GG + ++ + + KLP + ++S +NYLH+ II+
Sbjct: 120 SCFQTESRLFFVIEYVNGGDLMFHMQRQR---KLPEEHARFYSAEISLALNYLHERGIIY 176
Query: 414 RDLKAANLLMD 424
RDLK N+L+D
Sbjct: 177 RDLKLDNVLLD 187
>pdb|3SLS|A Chain A, Crystal Structure Of Human Mek-1 Kinase In Complex With
Ucb1353770 And Amppnp
pdb|3SLS|B Chain B, Crystal Structure Of Human Mek-1 Kinase In Complex With
Ucb1353770 And Amppnp
Length = 304
Score = 49.7 bits (117), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 42/145 (28%), Positives = 75/145 (51%), Gaps = 6/145 (4%)
Query: 298 SKVASGSYGDLYRGTYC-SQDVAIKVLKPERINSDMQKEFAQEVFIMRKVRHKNVVQFIG 356
S++ +G+ G +++ ++ S V + L I ++ + +E+ ++ + +V F G
Sbjct: 31 SELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSPYIVGFYG 90
Query: 357 ACTKPPSLCIVTEFMSGGSVYDYLHKLKGVFKLPSLLKVAIDVSKGMNYLHQ-NNIIHRD 415
A + I E M GGS+ D + K G L KV+I V KG+ YL + + I+HRD
Sbjct: 91 AFYSDGEISICMEHMDGGSL-DQVLKKAGRIPEQILGKVSIAVIKGLTYLREKHKIMHRD 149
Query: 416 LKAANLLMDENEVSLLLSLCLFTVS 440
+K +N+L++ + LC F VS
Sbjct: 150 VKPSNILVNSRGE---IKLCDFGVS 171
>pdb|2GU8|A Chain A, Discovery Of 2-pyrimidyl-5-amidothiophenes As Novel And
Potent Inhibitors For Akt: Synthesis And Sar Studies
Length = 337
Score = 49.3 bits (116), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 36/130 (27%), Positives = 65/130 (50%), Gaps = 4/130 (3%)
Query: 300 VASGSYGD--LYRGTYCSQDVAIKVLKPERINSDMQKEFA-QEVFIMRKVRHKNVVQFIG 356
+ +GS+G L + A+K+L +++ Q E E I++ V +V+
Sbjct: 36 LGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEF 95
Query: 357 ACTKPPSLCIVTEFMSGGSVYDYLHKLKGVFKLPSLLKVAIDVSKGMNYLHQNNIIHRDL 416
+ +L +V E+++GG ++ +L ++ G F P A + YLH ++I+RDL
Sbjct: 96 SFKDNSNLYMVMEYVAGGEMFSHLRRI-GRFSEPHARFYAAQIVLTFEYLHSLDLIYRDL 154
Query: 417 KAANLLMDEN 426
K NLL+DE
Sbjct: 155 KPENLLIDEQ 164
>pdb|1KOB|A Chain A, Twitchin Kinase Fragment (Aplysia), Autoregulated Protein
Kinase Domain
pdb|1KOB|B Chain B, Twitchin Kinase Fragment (Aplysia), Autoregulated Protein
Kinase Domain
Length = 387
Score = 49.3 bits (116), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 33/160 (20%), Positives = 74/160 (46%), Gaps = 18/160 (11%)
Query: 285 DVWEI---DPKHLKFGS---------KVASGSYGDLYRGTYCSQDVAIKVLKPERINSDM 332
D+W+ P +K GS ++ SG++G ++R C + +V + IN+
Sbjct: 32 DIWKKYVPQPVEVKQGSVYDYYDILEELGSGAFGVVHR---CVEKATGRVFVAKFINTPY 88
Query: 333 ---QKEFAQEVFIMRKVRHKNVVQFIGACTKPPSLCIVTEFMSGGSVYDYLHKLKGVFKL 389
+ E+ IM ++ H ++ A + ++ EF+SGG ++D +
Sbjct: 89 PLDKYTVKNEISIMNQLHHPKLINLHDAFEDKYEMVLILEFLSGGELFDRIAAEDYKMSE 148
Query: 390 PSLLKVAIDVSKGMNYLHQNNIIHRDLKAANLLMDENEVS 429
++ +G+ ++H+++I+H D+K N++ + + S
Sbjct: 149 AEVINYMRQACEGLKHMHEHSIVHLDIKPENIMCETKKAS 188
>pdb|4ERW|A Chain A, Cdk2 In Complex With Staurosporine
Length = 306
Score = 49.3 bits (116), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 31/129 (24%), Positives = 64/129 (49%), Gaps = 4/129 (3%)
Query: 299 KVASGSYGDLY--RGTYCSQDVAIKVLKPERINSDMQKEFAQEVFIMRKVRHKNVVQFIG 356
K+ G+YG +Y R + VA+K ++ + + +E+ +++++ H N+V+ +
Sbjct: 17 KIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLD 76
Query: 357 ACTKPPSLCIVTEFMSGG-SVYDYLHKLKGVFKLPSLLKVAIDVSKGMNYLHQNNIIHRD 415
L +V EF+ + L G+ LP + + +G+ + H + ++HRD
Sbjct: 77 VIHTENKLYLVFEFLHQDLKKFMDASALTGI-PLPLIKSYLFQLLQGLAFCHSHRVLHRD 135
Query: 416 LKAANLLMD 424
LK NLL++
Sbjct: 136 LKPQNLLIN 144
>pdb|3PXF|A Chain A, Cdk2 In Complex With Two Molecules Of
8-Anilino-1-Naphthalene Sulfonate
pdb|3PXQ|A Chain A, Cdk2 In Complex With 3 Molecules Of
8-Anilino-1-Naphthalene Sulfonate
pdb|3PXR|A Chain A, Apo Cdk2 Crystallized From Jeffamine
pdb|3PXY|A Chain A, Cdk2 In Complex With Inhibitor Jws648
pdb|3PXZ|A Chain A, Cdk2 Ternary Complex With Jws648 And Ans
pdb|3PY0|A Chain A, Cdk2 In Complex With Inhibitor Su9516
pdb|3PY1|A Chain A, Cdk2 Ternary Complex With Su9516 And Ans
pdb|3QL8|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-260
pdb|3QQF|A Chain A, Cdk2 In Complex With Inhibitor L1
pdb|3QQG|A Chain A, Cdk2 In Complex With Inhibitor L2-5
pdb|3QQH|A Chain A, Cdk2 In Complex With Inhibitor L2-2
pdb|3QQJ|A Chain A, Cdk2 In Complex With Inhibitor L2
pdb|3QQL|A Chain A, Cdk2 In Complex With Inhibitor L3
pdb|3QRT|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc2-55
pdb|3QRU|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc1-12
pdb|3QWJ|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-142
pdb|3QWK|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-150
pdb|3QX2|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-190
pdb|3QX4|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-78
pdb|3QXO|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-84
pdb|3QZF|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-52
pdb|3QZG|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-76
pdb|3QZH|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-124
pdb|3QZI|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-126
pdb|3R1Q|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-102
pdb|3R1S|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-127
pdb|3R1Y|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-134
pdb|3R28|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-140
pdb|3R6X|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-158
pdb|3R71|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-162
pdb|3R73|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-164
pdb|3R7E|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-67
pdb|3R7I|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-74
pdb|3R7U|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-75
pdb|3R7V|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-9
pdb|3R7Y|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-88
pdb|3R83|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-92
pdb|3R8L|A Chain A, Cdk2 In Complex With Inhibitor L3-4
pdb|3R8M|A Chain A, Cdk2 In Complex With Inhibitor L3-3
pdb|3R8P|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc1-6
pdb|3RAI|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-160
pdb|3RM6|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-80
pdb|3RM7|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-91
pdb|3ROY|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-154
pdb|3RPO|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-156
pdb|4EZ3|A Chain A, Cdk2 In Complex With Nsc 134199
pdb|4EZ7|A Chain A, Cdk2 In Complex With Staurosporine And 2 Molecules Of
8-Anilino-1- Naphthalene Sulfonic Acid
pdb|3QQK|A Chain A, Cdk2 In Complex With Inhibitor L4
pdb|3QTQ|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-137
pdb|3QTR|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-148
pdb|3QTS|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-12
pdb|3QTU|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-132
pdb|3QTW|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-13
pdb|3QTX|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-35
pdb|3QTZ|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-36
pdb|3QU0|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-38
pdb|3QXP|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-89
pdb|3R8U|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-132
pdb|3R8V|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-135
pdb|3R8Z|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-136
pdb|3R9D|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-135
pdb|3R9H|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-142
pdb|3R9N|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-21
pdb|3R9O|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-143
pdb|3RAH|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-22
pdb|3RAK|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-32
pdb|3RAL|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-34
pdb|3RJC|A Chain A, Cdk2 In Complex With Inhibitor L4-12
pdb|3RK5|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-72
pdb|3RK7|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-71
pdb|3RK9|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-74
pdb|3RKB|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-73
pdb|3RMF|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-33
pdb|3RNI|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-86
pdb|3RPR|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-49
pdb|3RPV|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-88
pdb|3RPY|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-40
pdb|3RZB|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-23
pdb|3S00|A Chain A, Cdk2 In Complex With Inhibitor L4-14
pdb|3S0O|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-138
pdb|3S1H|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-39
pdb|3SQQ|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-96
pdb|4GCJ|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-89
Length = 306
Score = 49.3 bits (116), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 31/129 (24%), Positives = 64/129 (49%), Gaps = 4/129 (3%)
Query: 299 KVASGSYGDLY--RGTYCSQDVAIKVLKPERINSDMQKEFAQEVFIMRKVRHKNVVQFIG 356
K+ G+YG +Y R + VA+K ++ + + +E+ +++++ H N+V+ +
Sbjct: 17 KIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLD 76
Query: 357 ACTKPPSLCIVTEFMSGG-SVYDYLHKLKGVFKLPSLLKVAIDVSKGMNYLHQNNIIHRD 415
L +V EF+ + L G+ LP + + +G+ + H + ++HRD
Sbjct: 77 VIHTENKLYLVFEFLHQDLKKFMDASALTGI-PLPLIKSYLFQLLQGLAFCHSHRVLHRD 135
Query: 416 LKAANLLMD 424
LK NLL++
Sbjct: 136 LKPQNLLIN 144
>pdb|1JST|A Chain A, Phosphorylated Cyclin-Dependent Kinase-2 Bound To Cyclin A
pdb|1JST|C Chain C, Phosphorylated Cyclin-Dependent Kinase-2 Bound To Cyclin A
pdb|1JSU|A Chain A, P27(Kip1)CYCLIN ACDK2 COMPLEX
pdb|1FQ1|B Chain B, Crystal Structure Of Kinase Associated Phosphatase (Kap)
In Complex With Phospho-Cdk2
pdb|2C6T|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6T|C Chain C, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2CJM|A Chain A, Mechanism Of Cdk Inhibition By Active Site
Phosphorylation: Cdk2 Y15p T160p In Complex With Cyclin
A Structure
pdb|2CJM|C Chain C, Mechanism Of Cdk Inhibition By Active Site
Phosphorylation: Cdk2 Y15p T160p In Complex With Cyclin
A Structure
pdb|2UZB|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZB|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZD|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZD|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZE|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZE|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZL|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZL|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|4II5|A Chain A, Structure Of Pcdk2/cyclina Bound To Adp And 1 Magnesium
Ion
pdb|4II5|C Chain C, Structure Of Pcdk2/cyclina Bound To Adp And 1 Magnesium
Ion
Length = 298
Score = 49.3 bits (116), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 31/129 (24%), Positives = 64/129 (49%), Gaps = 4/129 (3%)
Query: 299 KVASGSYGDLY--RGTYCSQDVAIKVLKPERINSDMQKEFAQEVFIMRKVRHKNVVQFIG 356
K+ G+YG +Y R + VA+K ++ + + +E+ +++++ H N+V+ +
Sbjct: 9 KIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLD 68
Query: 357 ACTKPPSLCIVTEFMSGG-SVYDYLHKLKGVFKLPSLLKVAIDVSKGMNYLHQNNIIHRD 415
L +V EF+ + L G+ LP + + +G+ + H + ++HRD
Sbjct: 69 VIHTENKLYLVFEFLHQDLKKFMDASALTGI-PLPLIKSYLFQLLQGLAFCHSHRVLHRD 127
Query: 416 LKAANLLMD 424
LK NLL++
Sbjct: 128 LKPQNLLIN 136
>pdb|1GZ8|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 2-Amino-6-(3'-Methyl-2'-Oxo)butoxypurine
pdb|2R3Q|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3M|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3I|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3N|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3O|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3P|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3K|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3J|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3L|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|1W8C|A Chain A, Co-crystal Structure Of
6-cyclohexylmethoxy-8-isopropyl-9h- Purin-2-ylamine And
Monomeric Cdk2
Length = 299
Score = 49.3 bits (116), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 31/129 (24%), Positives = 64/129 (49%), Gaps = 4/129 (3%)
Query: 299 KVASGSYGDLY--RGTYCSQDVAIKVLKPERINSDMQKEFAQEVFIMRKVRHKNVVQFIG 356
K+ G+YG +Y R + VA+K ++ + + +E+ +++++ H N+V+ +
Sbjct: 10 KIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLD 69
Query: 357 ACTKPPSLCIVTEFMSGG-SVYDYLHKLKGVFKLPSLLKVAIDVSKGMNYLHQNNIIHRD 415
L +V EF+ + L G+ LP + + +G+ + H + ++HRD
Sbjct: 70 VIHTENKLYLVFEFLHQDLKKFMDASALTGI-PLPLIKSYLFQLLQGLAFCHSHRVLHRD 128
Query: 416 LKAANLLMD 424
LK NLL++
Sbjct: 129 LKPQNLLIN 137
>pdb|2A19|B Chain B, Pkr Kinase Domain- Eif2alpha- Amp-Pnp Complex.
pdb|2A19|C Chain C, Pkr Kinase Domain- Eif2alpha- Amp-Pnp Complex.
pdb|2A1A|B Chain B, Pkr Kinase Domain-Eif2alpha Complex
Length = 284
Score = 49.3 bits (116), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 38/150 (25%), Positives = 75/150 (50%), Gaps = 24/150 (16%)
Query: 300 VASGSYGDLYRGTYCSQDVAIKVLKPERINSDMQKEFAQEVFIMRKVRHKNVVQFIGAC- 358
+ SG +G +++ + D V+K + N++ + +EV + K+ H N+V + G
Sbjct: 19 IGSGGFGQVFKAKH-RIDGKTYVIKRVKYNNEKAE---REVKALAKLDHVNIVHYNGCWD 74
Query: 359 ---------------TKPPSLCIVTEFMSGGSVYDYLHKLKGVFKLPSLLKVAI--DVSK 401
+K L I EF G++ ++ K +G KL +L + + ++K
Sbjct: 75 GFDYDPETSSKNSSRSKTKCLFIQMEFCDKGTLEQWIEKRRGE-KLDKVLALELFEQITK 133
Query: 402 GMNYLHQNNIIHRDLKAANL-LMDENEVSL 430
G++Y+H +I+RDLK +N+ L+D +V +
Sbjct: 134 GVDYIHSKKLINRDLKPSNIFLVDTKQVKI 163
>pdb|4EOO|A Chain A, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With Atp
pdb|4EOO|C Chain C, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With Atp
Length = 299
Score = 49.3 bits (116), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 31/129 (24%), Positives = 64/129 (49%), Gaps = 4/129 (3%)
Query: 299 KVASGSYGDLY--RGTYCSQDVAIKVLKPERINSDMQKEFAQEVFIMRKVRHKNVVQFIG 356
K+ G+YG +Y R + VA+K ++ + + +E+ +++++ H N+V+ +
Sbjct: 11 KIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLD 70
Query: 357 ACTKPPSLCIVTEFMSGG-SVYDYLHKLKGVFKLPSLLKVAIDVSKGMNYLHQNNIIHRD 415
L +V EF+ + L G+ LP + + +G+ + H + ++HRD
Sbjct: 71 VIHTENKLYLVFEFLHQDLKKFMDASALTGI-PLPLIKSYLFQLLQGLAFCHSHRVLHRD 129
Query: 416 LKAANLLMD 424
LK NLL++
Sbjct: 130 LKPENLLIN 138
>pdb|2W17|A Chain A, Cdk2 In Complex With The Imidazole Pyrimidine Amide,
Compound (S)-8b
pdb|3IG7|A Chain A, Novel Cdk-5 Inhibitors - Crystal Structure Of Inhibitor
Efp With Cdk-2
pdb|3IGG|A Chain A, Novel Cdk-5 Inhibitors - Crystal Structure Of Inhibitor
Efq With Cdk-2
pdb|1B38|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|1B39|A Chain A, Human Cyclin-Dependent Kinase 2 Phosphorylated On Thr 160
pdb|1E1V|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Nu2058
pdb|1E1X|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Nu6027
pdb|1H00|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1H07|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1H08|A Chain A, Cdk2 In Complex With A Disubstituted 2, 4-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|2R3R|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|4ACM|A Chain A, Cdk2 In Complex With
3-Amino-6-(4-{[2-(Dimethylamino)ethyl]
Sulfamoyl}-Phenyl)-N-Pyridin-3-Ylpyrazine-2-Carboxamide
pdb|3SW4|A Chain A, Crystal Structure Of The Cdk2 In Complex With
Thiazolylpyrimidine Inhibitor
pdb|3SW7|A Chain A, Crystal Structure Of The Cdk2 In Complex With
Thiazolylpyrimidine Inhibitor
pdb|1OIQ|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-Dependent Kinase Inhibitors Identified Through
Structure-Based Hybridisation
pdb|1V1K|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1URW|A Chain A, Cdk2 In Complex With An Imidazo[1,2-B]pyridazine
pdb|2VV9|A Chain A, Cdk2 In Complex With An Imidazole Piperazine
pdb|2W06|A Chain A, Structure Of Cdk2 In Complex With An Imidazolyl
Pyrimidine, Compound 5c
pdb|2R3G|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3H|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3F|A Chain A, Crystal Structure Of Cyclin-dependent Kinase 2 With
Inhibitor
Length = 299
Score = 49.3 bits (116), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 31/129 (24%), Positives = 64/129 (49%), Gaps = 4/129 (3%)
Query: 299 KVASGSYGDLY--RGTYCSQDVAIKVLKPERINSDMQKEFAQEVFIMRKVRHKNVVQFIG 356
K+ G+YG +Y R + VA+K ++ + + +E+ +++++ H N+V+ +
Sbjct: 10 KIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLD 69
Query: 357 ACTKPPSLCIVTEFMSGG-SVYDYLHKLKGVFKLPSLLKVAIDVSKGMNYLHQNNIIHRD 415
L +V EF+ + L G+ LP + + +G+ + H + ++HRD
Sbjct: 70 VIHTENKLYLVFEFLHQDLKKFMDASALTGI-PLPLIKSYLFQLLQGLAFCHSHRVLHRD 128
Query: 416 LKAANLLMD 424
LK NLL++
Sbjct: 129 LKPQNLLIN 137
>pdb|1FIN|A Chain A, Cyclin A-Cyclin-Dependent Kinase 2 Complex
pdb|1FIN|C Chain C, Cyclin A-Cyclin-Dependent Kinase 2 Complex
pdb|1CKP|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Purvalanol B
pdb|1BUH|A Chain A, Crystal Structure Of The Human Cdk2 Kinase Complex With
Cell Cycle-Regulatory Protein Ckshs1
pdb|1DM2|A Chain A, Human Cyclin-Dependent Kinase 2 Complexed With The
Inhibitor Hymenialdisine
pdb|1DI8|A Chain A, The Structure Of Cyclin-Dependent Kinase 2 (Cdk2) In
Complex With
4-[3-Hydroxyanilino]-6,7-Dimethoxyquinazoline
pdb|1F5Q|A Chain A, Crystal Structure Of Murine Gamma Herpesvirus Cyclin
Complexed To Human Cyclin Dependent Kinase 2
pdb|1F5Q|C Chain C, Crystal Structure Of Murine Gamma Herpesvirus Cyclin
Complexed To Human Cyclin Dependent Kinase 2
pdb|1FVT|A Chain A, The Structure Of Cyclin-Dependent Kinase 2 (Cdk2) In
Complex With An Oxindole Inhibitor
pdb|1FVV|A Chain A, The Structure Of Cdk2CYCLIN A IN COMPLEX WITH AN OXINDOLE
Inhibitor
pdb|1FVV|C Chain C, The Structure Of Cdk2CYCLIN A IN COMPLEX WITH AN OXINDOLE
Inhibitor
pdb|1JSV|A Chain A, The Structure Of Cyclin-dependent Kinase 2 (cdk2) In
Complex With 4-[(6-amino-4-pyrimidinyl)
Amino]benzenesulfonamide
pdb|1G5S|A Chain A, Crystal Structure Of Human Cyclin Dependent Kinase 2
(Cdk2) In Complex With The Inhibitor H717
pdb|1JVP|P Chain P, Crystal Structure Of Human Cdk2 (Unphosphorylated) In
Complex With Pkf049-365
pdb|1GIH|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|1KE5|A Chain A, Cdk2 Complexed With N-methyl-4-{[(2-oxo-1,2-dihydro-3h-
Indol-3-ylidene)methyl]amino}benzenesulfonamide
pdb|1KE6|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With
N-Methyl-{4-
[2-(7-Oxo-6,7-Dihydro-8h-[1,3]thiazolo[5,4-E]indol-8-
Ylidene)hydrazino]phenyl}methanesulfonamide
pdb|1KE7|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With 3-{[(2,2-
Dioxido-1,
3-Dihydro-2-Benzothien-5-Yl)amino]methylene}-5-
(1,3-Oxazol-5-Yl)-1,3-Dihydro-2h-Indol-2-One
pdb|1KE8|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With
4-{[(2-Oxo-
1,2-Dihydro-3h-Indol-3-Ylidene)methyl]amino}-N-(1,3-
Thiazol-2-Yl)benzenesulfonamide
pdb|1KE9|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With 3-{[4-
({[amino(Imino)methyl]aminosulfonyl)anilino]methylene}-
2- Oxo-2,3-Dihydro-1h-Indole
pdb|1H0V|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor
2-Amino-6-[(R)-Pyrrolidino-5'-Yl]methoxypurine
pdb|1H0W|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 2-Amino-6-[cyclohex-3-Enyl]methoxypurine
pdb|1P2A|A Chain A, The Structure Of Cyclin Dependent Kinase 2 (Ckd2) With A
Trisubstituted Naphthostyril Inhibitor
pdb|1OKV|A Chain A, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Ile-Phe-Nh2
pdb|1OKV|C Chain C, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Ile-Phe-Nh2
pdb|1OKW|A Chain A, Cyclin A Binding Groove Inhibitor
Ac-Arg-Arg-Leu-Asn-(M-Cl-Phe)-Nh2
pdb|1OKW|C Chain C, Cyclin A Binding Groove Inhibitor
Ac-Arg-Arg-Leu-Asn-(M-Cl-Phe)-Nh2
pdb|1OL1|A Chain A, Cyclin A Binding Groove Inhibitor
H-Cit-Cit-Leu-Ile-(P-F-Phe)-Nh2
pdb|1OL1|C Chain C, Cyclin A Binding Groove Inhibitor
H-Cit-Cit-Leu-Ile-(P-F-Phe)-Nh2
pdb|1OL2|A Chain A, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Asn-(P-F-Phe)-Nh2
pdb|1OL2|C Chain C, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Asn-(P-F-Phe)-Nh2
pdb|1PW2|A Chain A, Apo Structure Of Human Cyclin-Dependent Kinase 2
pdb|1PXI|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 4-(2,5-dichloro-thiophen-3-yl)-pyrimidin-2-
Ylamine
pdb|1PXJ|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-Ylamine
pdb|1PXK|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
N-[4-(2,4-dimethyl-thiazol-5-yl)pyrimidin-2-yl]-
N'-hydroxyiminoformamide
pdb|1PXL|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
[4-(2,4-dimethyl-thiazol-5-yl)-pyrimidin-2-yl]-
(4-trifluoromethyl-phenyl)-amine
pdb|1R78|A Chain A, Cdk2 Complex With A 4-alkynyl Oxindole Inhibitor
pdb|1PXM|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 3-[4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-
Ylamino]-Phenol
pdb|1PXN|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 4-[4-(4-Methyl-2-Methylamino-Thiazol-5-Yl)-
Pyrimidin-2-Ylamino]-Phenol
pdb|1PXO|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
[4-(2-Amino-4-Methyl-Thiazol-5-Yl)-Pyrimidin-2-
Yl]-(3-Nitro-Phenyl)-Amine
pdb|1PXP|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
N-[4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-Yl]-
N',N'-Dimethyl-Benzene-1,4-Diamine
pdb|1VYZ|A Chain A, Structure Of Cdk2 Complexed With Pnu-181227
pdb|1PYE|A Chain A, Crystal Structure Of Cdk2 With Inhibitor
pdb|1URC|A Chain A, Cyclin A Binding Groove Inhibitor Ace-Arg-Lys-Leu- Phe-Gly
pdb|1URC|C Chain C, Cyclin A Binding Groove Inhibitor Ace-Arg-Lys-Leu- Phe-Gly
pdb|1W0X|C Chain C, Crystals Structure Of Human Cdk2 In Complex With The
Inhibitor Olomoucine.
pdb|1WCC|A Chain A, Screening For Fragment Binding By X-Ray Crystallography
pdb|1Y8Y|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Pyrazolo[1, 5-A]pyrimidine Inhibitor
pdb|1Y91|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Pyrazolo[1, 5-A]pyrimidine Inhibitor
pdb|2BHE|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 5-Bromo-Indirubine
pdb|2BHH|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 4-Hydroxypiperindinesulfonyl-Indirubine
pdb|2B52|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With Dph-
042562
pdb|2B53|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With Din-
234325
pdb|2B54|A Chain A, Human Cyclin Dependent Kinase 2 (Ckd2)complexed With Din-
232305
pdb|2B55|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With
Indenopyraxole Din-101312
pdb|2BTR|A Chain A, Structure Of Cdk2 Complexed With Pnu-198873
pdb|2BTS|A Chain A, Structure Of Cdk2 Complexed With Pnu-230032
pdb|2C68|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C69|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6I|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6K|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6L|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6M|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6O|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2EXM|A Chain A, Human Cdk2 In Complex With Isopentenyladenine
pdb|1YKR|A Chain A, Crystal Structure Of Cdk2 With An Aminoimidazo Pyridine
Inhibitor
pdb|2A0C|X Chain X, Human Cdk2 In Complex With Olomoucine Ii, A Novel 2,6,9-
Trisubstituted Purine Cyclin-Dependent Kinase Inhibitor
pdb|2C5N|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5N|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5O|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5O|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5V|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5V|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5X|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5X|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5Y|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2A4L|A Chain A, Human Cyclin-Dependent Kinase 2 In Complex With
Roscovitine
pdb|2FVD|A Chain A, Cyclin Dependent Kinase 2 (Cdk2) With Diaminopyrimidine
Inhibitor
pdb|2I40|A Chain A, Cdk2CYCLIN A COMPLEXED WITH A THIOPHENE CARBOXAMIDE
INHIBITOR
pdb|2I40|C Chain C, Cdk2CYCLIN A COMPLEXED WITH A THIOPHENE CARBOXAMIDE
INHIBITOR
pdb|2CLX|A Chain A, 4-Arylazo-3,5-Diamino-1h-Pyrazole Cdk Inhibitors: Sar
Study, Crystal Structure In Complex With Cdk2,
Selectivity, And Cellular Effects
pdb|2DUV|A Chain A, Structure Of Cdk2 With A 3-Hydroxychromones
pdb|2UUE|A Chain A, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2UUE|C Chain C, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2UZN|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZO|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2V0D|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|1AQ1|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Staurosporine
pdb|1HCK|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|1HCL|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|2J9M|A Chain A, Crystal Structure Of Cdk2 In Complex With Macrocyclic
Aminopyrimidine
pdb|2V22|A Chain A, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2V22|C Chain C, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2VTA|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTH|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design
pdb|2VTI|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTJ|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTL|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTM|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTN|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTO|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTP|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTQ|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTR|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTS|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTT|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VU3|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2R64|A Chain A, Crystal Structure Of A 3-Aminoindazole Compound With Cdk2
pdb|2W05|A Chain A, Structure Of Cdk2 In Complex With An Imidazolyl
Pyrimidine, Compound 5b
pdb|3EID|A Chain A, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EID|C Chain C, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EJ1|A Chain A, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EJ1|C Chain C, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EOC|A Chain A, Cdk2/cyclina Complexed With A Imidazo Triazin-2-amine
pdb|3EOC|C Chain C, Cdk2/cyclina Complexed With A Imidazo Triazin-2-amine
pdb|2W1H|A Chain A, Fragment-Based Discovery Of The Pyrazol-4-Yl Urea
(At9283), A Multi-Targeted Kinase Inhibitor With Potent
Aurora Kinase Activity
pdb|3F5X|A Chain A, Cdk-2-Cyclin Complex With Indazole Inhibitor 9 Bound At
Its Active Site
pdb|3F5X|C Chain C, Cdk-2-Cyclin Complex With Indazole Inhibitor 9 Bound At
Its Active Site
pdb|3FZ1|A Chain A, Crystal Structure Of A Benzthiophene Inhibitor Bound To
Human Cyclin-Dependent Kinase-2 (Cdk-2)
pdb|2WEV|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WEV|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WFY|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WFY|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WHB|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WHB|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2X1N|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2X1N|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|3LFN|A Chain A, Crystal Structure Of Cdk2 With Sar57, An Aminoindazole
Type Inhibitor
pdb|3LFQ|A Chain A, Crystal Structure Of Cdk2 With Sar60, An Aminoindazole
Type Inhibitor
pdb|3LFS|A Chain A, Crystal Structure Of Cdk2 With Sar37, An Aminoindazole
Type Inhibitor
pdb|2XMY|A Chain A, Discovery And Characterisation Of
2-Anilino-4-(Thiazol-5-Yl) Pyrimidine Transcriptional
Cdk Inhibitors As Anticancer Agents
pdb|2XNB|A Chain A, Discovery And Characterisation Of
2-Anilino-4-(Thiazol-5-Yl) Pyrimidine Transcriptional
Cdk Inhibitors As Anticancer Agents
pdb|3LE6|A Chain A, The Structure Of Cyclin Dependent Kinase 2 (Ckd2) With A
Pyrazolobenzodiazepine Inhibitor
pdb|3NS9|A Chain A, Crystal Structure Of Cdk2 In Complex With Inhibitor Bs-194
pdb|3S2P|A Chain A, Crystal Structure Of Cdk2 With A 2-Aminopyrimidine
Compound
pdb|3UNJ|A Chain A, Cdk2 In Complex With Inhibitor Yl1-038-31
pdb|3UNK|A Chain A, Cdk2 In Complex With Inhibitor Yl5-083
pdb|3TI1|A Chain A, Cdk2 In Complex With Sunitinib
pdb|3TIY|A Chain A, Cdk2 In Complex With Nsc 35676
pdb|3TIZ|A Chain A, Cdk2 In Complex With Nsc 111848
Length = 298
Score = 49.3 bits (116), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 31/129 (24%), Positives = 64/129 (49%), Gaps = 4/129 (3%)
Query: 299 KVASGSYGDLY--RGTYCSQDVAIKVLKPERINSDMQKEFAQEVFIMRKVRHKNVVQFIG 356
K+ G+YG +Y R + VA+K ++ + + +E+ +++++ H N+V+ +
Sbjct: 9 KIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLD 68
Query: 357 ACTKPPSLCIVTEFMSGG-SVYDYLHKLKGVFKLPSLLKVAIDVSKGMNYLHQNNIIHRD 415
L +V EF+ + L G+ LP + + +G+ + H + ++HRD
Sbjct: 69 VIHTENKLYLVFEFLHQDLKKFMDASALTGI-PLPLIKSYLFQLLQGLAFCHSHRVLHRD 127
Query: 416 LKAANLLMD 424
LK NLL++
Sbjct: 128 LKPQNLLIN 136
>pdb|4EOP|A Chain A, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
pdb|4EOP|C Chain C, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
Length = 300
Score = 48.9 bits (115), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 31/129 (24%), Positives = 64/129 (49%), Gaps = 4/129 (3%)
Query: 299 KVASGSYGDLY--RGTYCSQDVAIKVLKPERINSDMQKEFAQEVFIMRKVRHKNVVQFIG 356
K+ G+YG +Y R + VA+K ++ + + +E+ +++++ H N+V+ +
Sbjct: 12 KIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLD 71
Query: 357 ACTKPPSLCIVTEFMSGG-SVYDYLHKLKGVFKLPSLLKVAIDVSKGMNYLHQNNIIHRD 415
L +V EF+ + L G+ LP + + +G+ + H + ++HRD
Sbjct: 72 VIHTENKLYLVFEFLHQDLKKFMDASALTGI-PLPLIKSYLFQLLQGLAFCHSHRVLHRD 130
Query: 416 LKAANLLMD 424
LK NLL++
Sbjct: 131 LKPENLLIN 139
>pdb|4I3Z|A Chain A, Structure Of Pcdk2CYCLINA BOUND TO ADP AND 2 MAGNESIUM
IONS
pdb|4I3Z|C Chain C, Structure Of Pcdk2CYCLINA BOUND TO ADP AND 2 MAGNESIUM
IONS
Length = 296
Score = 48.9 bits (115), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 31/129 (24%), Positives = 64/129 (49%), Gaps = 4/129 (3%)
Query: 299 KVASGSYGDLY--RGTYCSQDVAIKVLKPERINSDMQKEFAQEVFIMRKVRHKNVVQFIG 356
K+ G+YG +Y R + VA+K ++ + + +E+ +++++ H N+V+ +
Sbjct: 9 KIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLD 68
Query: 357 ACTKPPSLCIVTEFMSGG-SVYDYLHKLKGVFKLPSLLKVAIDVSKGMNYLHQNNIIHRD 415
L +V EF+ + L G+ LP + + +G+ + H + ++HRD
Sbjct: 69 VIHTENKLYLVFEFLHQDLKKFMDASALTGI-PLPLIKSYLFQLLQGLAFCHSHRVLHRD 127
Query: 416 LKAANLLMD 424
LK NLL++
Sbjct: 128 LKPQNLLIN 136
>pdb|1PF8|A Chain A, Crystal Structure Of Human Cyclin-dependent Kinase 2
Complexed With A Nucleoside Inhibitor
Length = 298
Score = 48.9 bits (115), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 31/129 (24%), Positives = 64/129 (49%), Gaps = 4/129 (3%)
Query: 299 KVASGSYGDLY--RGTYCSQDVAIKVLKPERINSDMQKEFAQEVFIMRKVRHKNVVQFIG 356
K+ G+YG +Y R + VA+K ++ + + +E+ +++++ H N+V+ +
Sbjct: 9 KIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLD 68
Query: 357 ACTKPPSLCIVTEFMSGG-SVYDYLHKLKGVFKLPSLLKVAIDVSKGMNYLHQNNIIHRD 415
L +V EF+ + L G+ LP + + +G+ + H + ++HRD
Sbjct: 69 VIHTENKLYLVFEFLHQDLKKFMDASALTGI-PLPLIKSYLFQLLQGLAFCHSHRVLHRD 127
Query: 416 LKAANLLMD 424
LK NLL++
Sbjct: 128 LKPQNLLIN 136
>pdb|1W98|A Chain A, The Structural Basis Of Cdk2 Activation By Cyclin E
pdb|4EOR|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Nu6102
pdb|4EOR|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Nu6102
Length = 298
Score = 48.9 bits (115), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 31/129 (24%), Positives = 64/129 (49%), Gaps = 4/129 (3%)
Query: 299 KVASGSYGDLY--RGTYCSQDVAIKVLKPERINSDMQKEFAQEVFIMRKVRHKNVVQFIG 356
K+ G+YG +Y R + VA+K ++ + + +E+ +++++ H N+V+ +
Sbjct: 10 KIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLD 69
Query: 357 ACTKPPSLCIVTEFMSGG-SVYDYLHKLKGVFKLPSLLKVAIDVSKGMNYLHQNNIIHRD 415
L +V EF+ + L G+ LP + + +G+ + H + ++HRD
Sbjct: 70 VIHTENKLYLVFEFLHQDLKKFMDASALTGI-PLPLIKSYLFQLLQGLAFCHSHRVLHRD 128
Query: 416 LKAANLLMD 424
LK NLL++
Sbjct: 129 LKPQNLLIN 137
>pdb|1QMZ|A Chain A, Phosphorylated Cdk2-Cyclyin A-Substrate Peptide Complex
pdb|1QMZ|C Chain C, Phosphorylated Cdk2-Cyclyin A-Substrate Peptide Complex
pdb|1GY3|A Chain A, Pcdk2CYCLIN A IN COMPLEX WITH MGADP, NITRATE AND PEPTIDE
SUBSTRATE
pdb|1GY3|C Chain C, Pcdk2CYCLIN A IN COMPLEX WITH MGADP, NITRATE AND PEPTIDE
SUBSTRATE
pdb|1P5E|A Chain A, The Strucure Of Phospho-Cdk2CYCLIN A IN COMPLEX WITH THE
Inhibitor 4,5,6,7-Tetrabromobenzotriazole (Tbs)
pdb|1P5E|C Chain C, The Strucure Of Phospho-Cdk2CYCLIN A IN COMPLEX WITH THE
Inhibitor 4,5,6,7-Tetrabromobenzotriazole (Tbs)
pdb|2CCH|A Chain A, The Crystal Structure Of Cdk2 Cyclin A In Complex With A
Substrate Peptide Derived From Cdc Modified With A
Gamma- Linked Atp Analogue
pdb|2CCH|C Chain C, The Crystal Structure Of Cdk2 Cyclin A In Complex With A
Substrate Peptide Derived From Cdc Modified With A
Gamma- Linked Atp Analogue
pdb|2CCI|A Chain A, Crystal Structure Of Phospho-Cdk2 Cyclin A In Complex With
A Peptide Containing Both The Substrate And Recruitment
Sites Of Cdc6
pdb|2CCI|C Chain C, Crystal Structure Of Phospho-Cdk2 Cyclin A In Complex With
A Peptide Containing Both The Substrate And Recruitment
Sites Of Cdc6
pdb|2G9X|A Chain A, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
COMPLEX WITH THE Inhibitor Nu6271
pdb|2G9X|C Chain C, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
COMPLEX WITH THE Inhibitor Nu6271
pdb|3DDP|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Cr8
pdb|3DDP|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Cr8
pdb|3DDQ|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Roscovitine
pdb|3DDQ|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Roscovitine
pdb|3DOG|A Chain A, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
Complex With The Inhibitor N-&-N1
pdb|3DOG|C Chain C, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
Complex With The Inhibitor N-&-N1
Length = 299
Score = 48.9 bits (115), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 31/129 (24%), Positives = 64/129 (49%), Gaps = 4/129 (3%)
Query: 299 KVASGSYGDLY--RGTYCSQDVAIKVLKPERINSDMQKEFAQEVFIMRKVRHKNVVQFIG 356
K+ G+YG +Y R + VA+K ++ + + +E+ +++++ H N+V+ +
Sbjct: 10 KIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLD 69
Query: 357 ACTKPPSLCIVTEFMSGG-SVYDYLHKLKGVFKLPSLLKVAIDVSKGMNYLHQNNIIHRD 415
L +V EF+ + L G+ LP + + +G+ + H + ++HRD
Sbjct: 70 VIHTENKLYLVFEFLHQDLKKFMDASALTGI-PLPLIKSYLFQLLQGLAFCHSHRVLHRD 128
Query: 416 LKAANLLMD 424
LK NLL++
Sbjct: 129 LKPQNLLIN 137
>pdb|3QHR|A Chain A, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHR|C Chain C, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHW|A Chain A, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHW|C Chain C, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
Length = 298
Score = 48.9 bits (115), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 31/129 (24%), Positives = 64/129 (49%), Gaps = 4/129 (3%)
Query: 299 KVASGSYGDLY--RGTYCSQDVAIKVLKPERINSDMQKEFAQEVFIMRKVRHKNVVQFIG 356
K+ G+YG +Y R + VA+K ++ + + +E+ +++++ H N+V+ +
Sbjct: 11 KIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLD 70
Query: 357 ACTKPPSLCIVTEFMSGG-SVYDYLHKLKGVFKLPSLLKVAIDVSKGMNYLHQNNIIHRD 415
L +V EF+ + L G+ LP + + +G+ + H + ++HRD
Sbjct: 71 VIHTENKLYLVFEFLHQDLKKFMDASALTGI-PLPLIKSYLFQLLQGLAFCHSHRVLHRD 129
Query: 416 LKAANLLMD 424
LK NLL++
Sbjct: 130 LKPQNLLIN 138
>pdb|4EOS|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Ro3306
pdb|4EOS|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Ro3306
Length = 300
Score = 48.9 bits (115), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 31/129 (24%), Positives = 64/129 (49%), Gaps = 4/129 (3%)
Query: 299 KVASGSYGDLY--RGTYCSQDVAIKVLKPERINSDMQKEFAQEVFIMRKVRHKNVVQFIG 356
K+ G+YG +Y R + VA+K ++ + + +E+ +++++ H N+V+ +
Sbjct: 12 KIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLD 71
Query: 357 ACTKPPSLCIVTEFMSGG-SVYDYLHKLKGVFKLPSLLKVAIDVSKGMNYLHQNNIIHRD 415
L +V EF+ + L G+ LP + + +G+ + H + ++HRD
Sbjct: 72 VIHTENKLYLVFEFLHQDLKKFMDASALTGI-PLPLIKSYLFQLLQGLAFCHSHRVLHRD 130
Query: 416 LKAANLLMD 424
LK NLL++
Sbjct: 131 LKPQNLLIN 139
>pdb|4EOQ|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With Atp
pdb|4EOQ|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With Atp
Length = 301
Score = 48.9 bits (115), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 31/129 (24%), Positives = 64/129 (49%), Gaps = 4/129 (3%)
Query: 299 KVASGSYGDLY--RGTYCSQDVAIKVLKPERINSDMQKEFAQEVFIMRKVRHKNVVQFIG 356
K+ G+YG +Y R + VA+K ++ + + +E+ +++++ H N+V+ +
Sbjct: 13 KIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLD 72
Query: 357 ACTKPPSLCIVTEFMSGG-SVYDYLHKLKGVFKLPSLLKVAIDVSKGMNYLHQNNIIHRD 415
L +V EF+ + L G+ LP + + +G+ + H + ++HRD
Sbjct: 73 VIHTENKLYLVFEFLHQDLKKFMDASALTGI-PLPLIKSYLFQLLQGLAFCHSHRVLHRD 131
Query: 416 LKAANLLMD 424
LK NLL++
Sbjct: 132 LKPQNLLIN 140
>pdb|4BCQ|A Chain A, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCQ|C Chain C, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 301
Score = 48.9 bits (115), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 31/129 (24%), Positives = 64/129 (49%), Gaps = 4/129 (3%)
Query: 299 KVASGSYGDLY--RGTYCSQDVAIKVLKPERINSDMQKEFAQEVFIMRKVRHKNVVQFIG 356
K+ G+YG +Y R + VA+K ++ + + +E+ +++++ H N+V+ +
Sbjct: 12 KIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLD 71
Query: 357 ACTKPPSLCIVTEFMSGG-SVYDYLHKLKGVFKLPSLLKVAIDVSKGMNYLHQNNIIHRD 415
L +V EF+ + L G+ LP + + +G+ + H + ++HRD
Sbjct: 72 VIHTENKLYLVFEFLHQDLKKFMDASALTGI-PLPLIKSYLFQLLQGLAFCHSHRVLHRD 130
Query: 416 LKAANLLMD 424
LK NLL++
Sbjct: 131 LKPQNLLIN 139
>pdb|1E9H|A Chain A, Thr 160 Phosphorylated Cdk2-Human Cyclin A3 Complex With
The Inhibitor Indirubin-5-Sulphonate Bound
pdb|1E9H|C Chain C, Thr 160 Phosphorylated Cdk2-Human Cyclin A3 Complex With
The Inhibitor Indirubin-5-Sulphonate Bound
pdb|1PKD|A Chain A, The Crystal Structure Of Ucn-01 In Complex With Phospho-
Cdk2CYCLIN A
pdb|1PKD|C Chain C, The Crystal Structure Of Ucn-01 In Complex With Phospho-
Cdk2CYCLIN A
Length = 297
Score = 48.9 bits (115), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 31/129 (24%), Positives = 64/129 (49%), Gaps = 4/129 (3%)
Query: 299 KVASGSYGDLY--RGTYCSQDVAIKVLKPERINSDMQKEFAQEVFIMRKVRHKNVVQFIG 356
K+ G+YG +Y R + VA+K ++ + + +E+ +++++ H N+V+ +
Sbjct: 10 KIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLD 69
Query: 357 ACTKPPSLCIVTEFMSGG-SVYDYLHKLKGVFKLPSLLKVAIDVSKGMNYLHQNNIIHRD 415
L +V EF+ + L G+ LP + + +G+ + H + ++HRD
Sbjct: 70 VIHTENKLYLVFEFLHQDLKKFMDASALTGI-PLPLIKSYLFQLLQGLAFCHSHRVLHRD 128
Query: 416 LKAANLLMD 424
LK NLL++
Sbjct: 129 LKPQNLLIN 137
>pdb|4EJN|A Chain A, Crystal Structure Of Autoinhibited Form Of Akt1 In Complex
With N-(4-
(5-(3-Acetamidophenyl)-2-(2-Aminopyridin-3-Yl)-3h-
Imidazo[4,5- B]pyridin-3-Yl)benzyl)-3-Fluorobenzamide
Length = 446
Score = 48.9 bits (115), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 49/201 (24%), Positives = 93/201 (46%), Gaps = 15/201 (7%)
Query: 232 EETEQLRAALEKEVLKLERQGWPS--HRSSSPTSEPEDTGMKSHPYHLKIPNDGTDVWEI 289
EE E+ A++ L++Q RS SP+ +++G + L P + E
Sbjct: 94 EEREEWTTAIQTVADGLKKQAAAEMDFRSGSPS---DNSGAEEMEVSLAKPKHRVTMNEF 150
Query: 290 DPKHLKFGSKVASGSYGD--LYRGTYCSQDVAIKVLKPERI-NSDMQKEFAQEVFIMRKV 346
+ +LK + G++G L + + A+K+LK E I D E +++
Sbjct: 151 E--YLKL---LGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQNS 205
Query: 347 RHKNVVQFIGACTKPPSLCIVTEFMSGGSVYDYLHKLKGVFKLPSLLKVAIDVSKGMNYL 406
RH + + LC V E+ +GG ++ +L + + VF ++ ++YL
Sbjct: 206 RHPFLTALKYSFQTHDRLCFVMEYANGGELFFHLSRER-VFSEDRARFYGAEIVSALDYL 264
Query: 407 H-QNNIIHRDLKAANLLMDEN 426
H + N+++RDLK NL++D++
Sbjct: 265 HSEKNVVYRDLKLENLMLDKD 285
>pdb|2JGZ|A Chain A, Crystal Structure Of Phospho-Cdk2 In Complex With Cyclin B
Length = 289
Score = 48.9 bits (115), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 31/129 (24%), Positives = 64/129 (49%), Gaps = 4/129 (3%)
Query: 299 KVASGSYGDLY--RGTYCSQDVAIKVLKPERINSDMQKEFAQEVFIMRKVRHKNVVQFIG 356
K+ G+YG +Y R + VA+K ++ + + +E+ +++++ H N+V+ +
Sbjct: 10 KIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLD 69
Query: 357 ACTKPPSLCIVTEFMSGG-SVYDYLHKLKGVFKLPSLLKVAIDVSKGMNYLHQNNIIHRD 415
L +V EF+ + L G+ LP + + +G+ + H + ++HRD
Sbjct: 70 VIHTENKLYLVFEFLHQDLKKFMDASALTGI-PLPLIKSYLFQLLQGLAFCHSHRVLHRD 128
Query: 416 LKAANLLMD 424
LK NLL++
Sbjct: 129 LKPQNLLIN 137
>pdb|3BHT|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 3
pdb|3BHT|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 3
pdb|3BHU|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 5
pdb|3BHU|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 5
pdb|3BHV|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Variolin B
pdb|3BHV|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Variolin B
pdb|3MY5|A Chain A, Cdk2CYCLINA IN COMPLEX WITH DRB
pdb|3MY5|C Chain C, Cdk2CYCLINA IN COMPLEX WITH DRB
pdb|3TNW|A Chain A, Structure Of Cdk2CYCLIN A IN COMPLEX WITH CAN508
pdb|3TNW|C Chain C, Structure Of Cdk2CYCLIN A IN COMPLEX WITH CAN508
pdb|4BCO|A Chain A, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCO|C Chain C, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 300
Score = 48.9 bits (115), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 31/129 (24%), Positives = 64/129 (49%), Gaps = 4/129 (3%)
Query: 299 KVASGSYGDLY--RGTYCSQDVAIKVLKPERINSDMQKEFAQEVFIMRKVRHKNVVQFIG 356
K+ G+YG +Y R + VA+K ++ + + +E+ +++++ H N+V+ +
Sbjct: 11 KIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLD 70
Query: 357 ACTKPPSLCIVTEFMSGG-SVYDYLHKLKGVFKLPSLLKVAIDVSKGMNYLHQNNIIHRD 415
L +V EF+ + L G+ LP + + +G+ + H + ++HRD
Sbjct: 71 VIHTENKLYLVFEFLHQDLKKFMDASALTGI-PLPLIKSYLFQLLQGLAFCHSHRVLHRD 129
Query: 416 LKAANLLMD 424
LK NLL++
Sbjct: 130 LKPQNLLIN 138
>pdb|1H1P|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu2058
pdb|1H1P|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu2058
pdb|1H1Q|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6094
pdb|1H1Q|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6094
pdb|1H1R|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6086
pdb|1H1R|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6086
pdb|1H1S|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6102
pdb|1H1S|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6102
pdb|1H24|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH A 9 RESIDUE RECRUITMENT
Peptide From E2f
pdb|1H24|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH A 9 RESIDUE RECRUITMENT
Peptide From E2f
pdb|1H25|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From Retinoblastoma-Associated Protein
pdb|1H25|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From Retinoblastoma-Associated Protein
pdb|1H26|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P53
pdb|1H26|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P53
pdb|1H27|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P27
pdb|1H27|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P27
pdb|1H28|A Chain A, Cdk2/cyclin A In Complex With An 11-residue Recruitment
Peptide From P107
pdb|1H28|C Chain C, Cdk2/cyclin A In Complex With An 11-residue Recruitment
Peptide From P107
pdb|2WMA|A Chain A, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMA|C Chain C, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMB|A Chain A, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMB|C Chain C, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
Length = 303
Score = 48.9 bits (115), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 31/129 (24%), Positives = 64/129 (49%), Gaps = 4/129 (3%)
Query: 299 KVASGSYGDLY--RGTYCSQDVAIKVLKPERINSDMQKEFAQEVFIMRKVRHKNVVQFIG 356
K+ G+YG +Y R + VA+K ++ + + +E+ +++++ H N+V+ +
Sbjct: 14 KIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLD 73
Query: 357 ACTKPPSLCIVTEFMSGG-SVYDYLHKLKGVFKLPSLLKVAIDVSKGMNYLHQNNIIHRD 415
L +V EF+ + L G+ LP + + +G+ + H + ++HRD
Sbjct: 74 VIHTENKLYLVFEFLHQDLKKFMDASALTGI-PLPLIKSYLFQLLQGLAFCHSHRVLHRD 132
Query: 416 LKAANLLMD 424
LK NLL++
Sbjct: 133 LKPQNLLIN 141
>pdb|1OGU|A Chain A, Structure Of Human Thr160-phospho Cdk2/cyclin A Complexed
With A
2-arylamino-4-cyclohexylmethyl-5-nitroso-6-
aminopyrimidine Inhibitor
pdb|1OGU|C Chain C, Structure Of Human Thr160-phospho Cdk2/cyclin A Complexed
With A
2-arylamino-4-cyclohexylmethyl-5-nitroso-6-
aminopyrimidine Inhibitor
pdb|1OI9|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OI9|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIU|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIU|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIY|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIY|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
Length = 302
Score = 48.9 bits (115), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 31/129 (24%), Positives = 64/129 (49%), Gaps = 4/129 (3%)
Query: 299 KVASGSYGDLY--RGTYCSQDVAIKVLKPERINSDMQKEFAQEVFIMRKVRHKNVVQFIG 356
K+ G+YG +Y R + VA+K ++ + + +E+ +++++ H N+V+ +
Sbjct: 13 KIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLD 72
Query: 357 ACTKPPSLCIVTEFMSGG-SVYDYLHKLKGVFKLPSLLKVAIDVSKGMNYLHQNNIIHRD 415
L +V EF+ + L G+ LP + + +G+ + H + ++HRD
Sbjct: 73 VIHTENKLYLVFEFLHQDLKKFMDASALTGI-PLPLIKSYLFQLLQGLAFCHSHRVLHRD 131
Query: 416 LKAANLLMD 424
LK NLL++
Sbjct: 132 LKPQNLLIN 140
>pdb|2QR8|A Chain A, 2.0a X-ray Structure Of C-terminal Kinase Domain Of P90
Ribosomal S6 Kinase 2 (rsk2)
pdb|4D9U|A Chain A, Rsk2 C-Terminal Kinase Domain, (E)-Tert-Butyl
3-(4-Amino-7-(3-
Hydroxypropyl)-5-P-Tolyl-7h-Pyrrolo[2,
3-D]pyrimidin-6-Yl)-2- Cyanoacrylate
pdb|4D9T|A Chain A, Rsk2 C-Terminal Kinase Domain With Inhibitor (E)-Methyl
3-(4-Amino-7-
(3-Hydroxypropyl)-5-P-Tolyl-7h-Pyrrolo[2,
3-D]pyrimidin-6-Yl)-2- Cyanoacrylate
Length = 342
Score = 48.9 bits (115), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 35/139 (25%), Positives = 64/139 (46%), Gaps = 5/139 (3%)
Query: 300 VASGSYGDLYRGTYCSQDVAIKVLKPERINSDMQKEFAQEVFIMRKVRHKNVVQFIGACT 359
+ GSY R + + ++ V ++ D +E ++R +H N++
Sbjct: 30 IGVGSYSVCKRCIHKATNMEFAVKIIDKSKRDPTEEIE---ILLRYGQHPNIITLKDVYD 86
Query: 360 KPPSLCIVTEFMSGGSVYDYLHKLKGVFKLPSLLKVAIDVSKGMNYLHQNNIIHRDLKAA 419
+ +VTE M GG + D + + K F V ++K + YLH ++HRDLK +
Sbjct: 87 DGKYVYVVTELMKGGELLDKILRQK-FFSEREASAVLFTITKTVEYLHAQGVVHRDLKPS 145
Query: 420 NLL-MDENEVSLLLSLCLF 437
N+L +DE+ + +C F
Sbjct: 146 NILYVDESGNPESIRICDF 164
>pdb|3EZR|A Chain A, Cdk-2 With Indazole Inhibitor 17 Bound At Its Active Site
pdb|3EZV|A Chain A, Cdk-2 With Indazole Inhibitor 9 Bound At Its Active Site
Length = 300
Score = 48.9 bits (115), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 31/129 (24%), Positives = 64/129 (49%), Gaps = 4/129 (3%)
Query: 299 KVASGSYGDLY--RGTYCSQDVAIKVLKPERINSDMQKEFAQEVFIMRKVRHKNVVQFIG 356
K+ G+YG +Y R + VA+K ++ + + +E+ +++++ H N+V+ +
Sbjct: 11 KIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLD 70
Query: 357 ACTKPPSLCIVTEFMSGG-SVYDYLHKLKGVFKLPSLLKVAIDVSKGMNYLHQNNIIHRD 415
L +V EF+ + L G+ LP + + +G+ + H + ++HRD
Sbjct: 71 VIHTENKLYLVFEFLHQDLKKFMDASALTGI-PLPLIKSYLFQLLQGLAFCHSHRVLHRD 129
Query: 416 LKAANLLMD 424
LK NLL++
Sbjct: 130 LKPQNLLIN 138
>pdb|3GC8|A Chain A, The Structure Of P38beta C162s In Complex With A
Dihydroquinazolinone
pdb|3GC8|B Chain B, The Structure Of P38beta C162s In Complex With A
Dihydroquinazolinone
Length = 370
Score = 48.9 bits (115), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 39/154 (25%), Positives = 71/154 (46%), Gaps = 22/154 (14%)
Query: 286 VWEIDPKHLKFGSKVASGSYGDLYRG--TYCSQDVAIKVLKPERINSDMQKEFAQEVFIM 343
VWE+ P+ L+ V SG+YG + Q VA+K L + + +E+ ++
Sbjct: 23 VWEV-PQRLQGLRPVGSGAYGSVCSAYDARLRQKVAVKKLSRPFQSLIHARRTYRELRLL 81
Query: 344 RKVRHKNVVQFIGACTKPPSL------CIVTEFMSGGSVYDYLHKLKGVFKLPSLLK--- 394
+ ++H+NV+ + T S+ +VT M L + K +L
Sbjct: 82 KHLKHENVIGLLDVFTPATSIEDFSEVYLVTTLMGA--------DLNNIVKCQALSDEHV 133
Query: 395 --VAIDVSKGMNYLHQNNIIHRDLKAANLLMDEN 426
+ + +G+ Y+H IIHRDLK +N+ ++E+
Sbjct: 134 QFLVYQLLRGLKYIHSAGIIHRDLKPSNVAVNED 167
>pdb|3PJ8|A Chain A, Structure Of Cdk2 In Complex With A
Pyrazolo[4,3-D]pyrimidine Bioisostere Of Roscovitine
Length = 299
Score = 48.9 bits (115), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 31/129 (24%), Positives = 64/129 (49%), Gaps = 4/129 (3%)
Query: 299 KVASGSYGDLY--RGTYCSQDVAIKVLKPERINSDMQKEFAQEVFIMRKVRHKNVVQFIG 356
K+ G+YG +Y R + VA+K ++ + + +E+ +++++ H N+V+ +
Sbjct: 10 KIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLD 69
Query: 357 ACTKPPSLCIVTEFMSGG-SVYDYLHKLKGVFKLPSLLKVAIDVSKGMNYLHQNNIIHRD 415
L +V EF+ + L G+ LP + + +G+ + H + ++HRD
Sbjct: 70 VIHTENKLYLVFEFLHQDLKKFMDASALTGI-PLPLIKSYLFQLLQGLAFCHSHRVLHRD 128
Query: 416 LKAANLLMD 424
LK NLL++
Sbjct: 129 LKPQNLLIN 137
>pdb|3KVW|A Chain A, Crystal Structure Of Dual-Specificity Tyrosine
Phosphorylation Regulated Kinase 2 (Dyrk2) In Complex
With An Indirubin Ligand
Length = 429
Score = 48.9 bits (115), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 38/139 (27%), Positives = 72/139 (51%), Gaps = 13/139 (9%)
Query: 300 VASGSYGDLYRGT--YCSQDVAIKVLKPERINSDMQKEFAQEVFIMRKVRHK------NV 351
+ GS+G + + Q VA+K+++ E+ ++ A+E+ I+ +R + NV
Sbjct: 105 IGKGSFGQVVKAYDHKVHQHVALKMVRNEK---RFHRQAAEEIRILEHLRKQDKDNTMNV 161
Query: 352 VQFIGACTKPPSLCIVTEFMSGGSVYDYLHKLK-GVFKLPSLLKVAIDVSKGMNYLHQNN 410
+ + T +C+ E +S ++Y+ + K K F LP + K A + + ++ LH+N
Sbjct: 162 IHMLENFTFRNHICMTFELLSM-NLYELIKKNKFQGFSLPLVRKFAHSILQCLDALHKNR 220
Query: 411 IIHRDLKAANLLMDENEVS 429
IIH DLK N+L+ + S
Sbjct: 221 IIHCDLKPENILLKQQGRS 239
>pdb|4AZF|A Chain A, Human Dyrk2 In Complex With Leucettine L41
Length = 417
Score = 48.9 bits (115), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 38/139 (27%), Positives = 72/139 (51%), Gaps = 13/139 (9%)
Query: 300 VASGSYGDLYRGT--YCSQDVAIKVLKPERINSDMQKEFAQEVFIMRKVRHK------NV 351
+ GS+G + + Q VA+K+++ E+ ++ A+E+ I+ +R + NV
Sbjct: 105 IGKGSFGQVVKAYDHKVHQHVALKMVRNEK---RFHRQAAEEIRILEHLRKQDKDNTMNV 161
Query: 352 VQFIGACTKPPSLCIVTEFMSGGSVYDYLHKLK-GVFKLPSLLKVAIDVSKGMNYLHQNN 410
+ + T +C+ E +S ++Y+ + K K F LP + K A + + ++ LH+N
Sbjct: 162 IHMLENFTFRNHICMTFELLSM-NLYELIKKNKFQGFSLPLVRKFAHSILQCLDALHKNR 220
Query: 411 IIHRDLKAANLLMDENEVS 429
IIH DLK N+L+ + S
Sbjct: 221 IIHCDLKPENILLKQQGRS 239
>pdb|2WNT|A Chain A, Crystal Structure Of The Human Ribosomal Protein S6 Kinase
pdb|2WNT|B Chain B, Crystal Structure Of The Human Ribosomal Protein S6 Kinase
Length = 330
Score = 48.9 bits (115), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 36/139 (25%), Positives = 64/139 (46%), Gaps = 5/139 (3%)
Query: 300 VASGSYGDLYRGTYCSQDVAIKVLKPERINSDMQKEFAQEVFIMRKVRHKNVVQFIGACT 359
+ GSY + R + + ++ V ++ D +E ++R +H N++
Sbjct: 35 IGVGSYSECKRCVHKATNMEYAVKVIDKSKRDPSEEIE---ILLRYGQHPNIITLKDVYD 91
Query: 360 KPPSLCIVTEFMSGGSVYDYLHKLKGVFKLPSLLKVAIDVSKGMNYLHQNNIIHRDLKAA 419
+ +VTE M GG + D + + K F V + K + YLH ++HRDLK +
Sbjct: 92 DGKHVYLVTELMRGGELLDKILRQK-FFSEREASFVLHTIGKTVEYLHSQGVVHRDLKPS 150
Query: 420 NLL-MDENEVSLLLSLCLF 437
N+L +DE+ L +C F
Sbjct: 151 NILYVDESGNPECLRICDF 169
>pdb|3RNY|A Chain A, Crystal Structure Of Human Rsk1 C-Terminal Kinase Domain
pdb|3RNY|B Chain B, Crystal Structure Of Human Rsk1 C-Terminal Kinase Domain
Length = 346
Score = 48.9 bits (115), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 36/139 (25%), Positives = 64/139 (46%), Gaps = 5/139 (3%)
Query: 300 VASGSYGDLYRGTYCSQDVAIKVLKPERINSDMQKEFAQEVFIMRKVRHKNVVQFIGACT 359
+ GSY + R + + ++ V ++ D +E ++R +H N++
Sbjct: 35 IGVGSYSECKRCVHKATNMEYAVKVIDKSKRDPSEEIE---ILLRYGQHPNIITLKDVYD 91
Query: 360 KPPSLCIVTEFMSGGSVYDYLHKLKGVFKLPSLLKVAIDVSKGMNYLHQNNIIHRDLKAA 419
+ +VTE M GG + D + + K F V + K + YLH ++HRDLK +
Sbjct: 92 DGKHVYLVTELMRGGELLDKILRQK-FFSEREASFVLHTIGKTVEYLHSQGVVHRDLKPS 150
Query: 420 NLL-MDENEVSLLLSLCLF 437
N+L +DE+ L +C F
Sbjct: 151 NILYVDESGNPECLRICDF 169
>pdb|3GP0|A Chain A, Crystal Structure Of Human Mitogen Activated Protein
Kinase 11 (p38 Beta) In Complex With Nilotinib
Length = 348
Score = 48.9 bits (115), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 39/154 (25%), Positives = 71/154 (46%), Gaps = 22/154 (14%)
Query: 286 VWEIDPKHLKFGSKVASGSYGDLYRG--TYCSQDVAIKVLKPERINSDMQKEFAQEVFIM 343
VWE+ P+ L+ V SG+YG + Q VA+K L + + +E+ ++
Sbjct: 15 VWEV-PQRLQGLRPVGSGAYGSVCSAYDARLRQKVAVKKLSRPFQSLIHARRTYRELRLL 73
Query: 344 RKVRHKNVVQFIGACTKPPSL------CIVTEFMSGGSVYDYLHKLKGVFKLPSLLK--- 394
+ ++H+NV+ + T S+ +VT M L + K +L
Sbjct: 74 KHLKHENVIGLLDVFTPATSIEDFSEVYLVTTLMGA--------DLNNIVKCQALSDEHV 125
Query: 395 --VAIDVSKGMNYLHQNNIIHRDLKAANLLMDEN 426
+ + +G+ Y+H IIHRDLK +N+ ++E+
Sbjct: 126 QFLVYQLLRGLKYIHSAGIIHRDLKPSNVAVNED 159
>pdb|3UYS|A Chain A, Crystal Structure Of Apo Human Ck1d
pdb|3UYS|B Chain B, Crystal Structure Of Apo Human Ck1d
pdb|3UYS|C Chain C, Crystal Structure Of Apo Human Ck1d
pdb|3UYS|D Chain D, Crystal Structure Of Apo Human Ck1d
pdb|3UYT|A Chain A, Crystal Structure Of Ck1d With Pf670462 From P1 Crystal
Form
pdb|3UYT|B Chain B, Crystal Structure Of Ck1d With Pf670462 From P1 Crystal
Form
pdb|3UYT|C Chain C, Crystal Structure Of Ck1d With Pf670462 From P1 Crystal
Form
pdb|3UYT|D Chain D, Crystal Structure Of Ck1d With Pf670462 From P1 Crystal
Form
pdb|3UZP|A Chain A, Crystal Structure Of Ck1d With Pf670462 From P21 Crystal
Form
pdb|3UZP|B Chain B, Crystal Structure Of Ck1d With Pf670462 From P21 Crystal
Form
pdb|4HNF|A Chain A, Crystal Structure Of Ck1d In Complex With Pf4800567
pdb|4HNF|B Chain B, Crystal Structure Of Ck1d In Complex With Pf4800567
pdb|4HGT|A Chain A, Crystal Structure Of Ck1d With Compound 13
pdb|4HGT|B Chain B, Crystal Structure Of Ck1d With Compound 13
Length = 296
Score = 48.9 bits (115), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 39/148 (26%), Positives = 70/148 (47%), Gaps = 6/148 (4%)
Query: 295 KFGSKVASGSYGDLYRGT--YCSQDVAIKVLKPERINSDMQKEFAQEVFIMRKVRHKNVV 352
+ G K+ SGS+GD+Y GT ++VAIK+ E + + + E I + ++ +
Sbjct: 12 RLGRKIGSGSFGDIYLGTDIAAGEEVAIKL---ECVKTK-HPQLHIESKIYKMMQGGVGI 67
Query: 353 QFIGACTKPPSLCIVTEFMSGGSVYDYLHKLKGVFKLPSLLKVAIDVSKGMNYLHQNNII 412
I C ++ + G S+ D + F L ++L +A + + Y+H N I
Sbjct: 68 PTIRWCGAEGDYNVMVMELLGPSLEDLFNFCSRKFSLKTVLLLADQMISRIEYIHSKNFI 127
Query: 413 HRDLKAANLLMDENEVSLLLSLCLFTVS 440
HRD+K N LM + L+ + F ++
Sbjct: 128 HRDVKPDNFLMGLGKKGNLVYIIDFGLA 155
>pdb|1S9I|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 2 (Mek2)in A Complex With Ligand And Mgatp
pdb|1S9I|B Chain B, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 2 (Mek2)in A Complex With Ligand And Mgatp
Length = 354
Score = 48.5 bits (114), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 35/116 (30%), Positives = 61/116 (52%), Gaps = 9/116 (7%)
Query: 328 INSDMQKEFAQEVFIMRKVRHKNVVQFIGACTKPPSLCIVTEFMSGGSVYDYLHKLKGVF 387
I ++ + +E+ ++ + +V F GA + I E M GGS+ L + K
Sbjct: 53 IKPAIRNQIIRELQVLHECNSPYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKEAK--- 109
Query: 388 KLPS--LLKVAIDVSKGMNYLHQ-NNIIHRDLKAANLLMDENEVSLLLSLCLFTVS 440
++P L KV+I V +G+ YL + + I+HRD+K +N+L++ + LC F VS
Sbjct: 110 RIPEEILGKVSIAVLRGLAYLREKHQIMHRDVKPSNILVNSRGE---IKLCDFGVS 162
>pdb|1V0O|A Chain A, Structure Of P. Falciparum Pfpk5-Indirubin-5-Sulphonate
Ligand Complex
pdb|1V0O|B Chain B, Structure Of P. Falciparum Pfpk5-Indirubin-5-Sulphonate
Ligand Complex
Length = 288
Score = 48.5 bits (114), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 31/134 (23%), Positives = 66/134 (49%), Gaps = 3/134 (2%)
Query: 299 KVASGSYGDLYRG-TYCSQDVAIKVLKPERINSDMQKEFAQEVFIMRKVRHKNVVQFIGA 357
K+ G+YG +Y+ + A+K ++ E+ + + +E+ I+++++H N+V+
Sbjct: 9 KIGEGTYGVVYKAQNNYGETFALKKIRLEKEDEGIPSTTIREISILKELKHSNIVKLYDV 68
Query: 358 CTKPPSLCIVTEFMSGGSVYDYLHKLKGVFKLPSLLKVAIDVSKGMNYLHQNNIIHRDLK 417
L +V E + + L +G + + + + G+ Y H ++HRDLK
Sbjct: 69 IHTKKRLVLVFEHLDQ-DLKKLLDVCEGGLESVTAKSFLLQLLNGIAYCHDRRVLHRDLK 127
Query: 418 AANLLMD-ENEVSL 430
NLL++ E E+ +
Sbjct: 128 PQNLLINREGELKI 141
>pdb|1CKJ|A Chain A, Casein Kinase I Delta Truncation Mutant Containing
Residues 1-317 Complex With Bound Tungstate
pdb|1CKJ|B Chain B, Casein Kinase I Delta Truncation Mutant Containing
Residues 1-317 Complex With Bound Tungstate
pdb|1CKI|A Chain A, Recombinant Casein Kinase I Delta Truncation Mutant
Containing Residues 1-317
pdb|1CKI|B Chain B, Recombinant Casein Kinase I Delta Truncation Mutant
Containing Residues 1-317
Length = 317
Score = 48.5 bits (114), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 39/148 (26%), Positives = 70/148 (47%), Gaps = 6/148 (4%)
Query: 295 KFGSKVASGSYGDLYRGT--YCSQDVAIKVLKPERINSDMQKEFAQEVFIMRKVRHKNVV 352
+ G K+ SGS+GD+Y GT ++VAIK+ E + + + E I + ++ +
Sbjct: 10 RLGRKIGSGSFGDIYLGTDIAAGEEVAIKL---ECVKTK-HPQLHIESKIYKMMQGGVGI 65
Query: 353 QFIGACTKPPSLCIVTEFMSGGSVYDYLHKLKGVFKLPSLLKVAIDVSKGMNYLHQNNII 412
I C ++ + G S+ D + F L ++L +A + + Y+H N I
Sbjct: 66 PTIRWCGAEGDYNVMVMELLGPSLEDLFNFCSRKFSLKTVLLLADQMISRIEYIHSKNFI 125
Query: 413 HRDLKAANLLMDENEVSLLLSLCLFTVS 440
HRD+K N LM + L+ + F ++
Sbjct: 126 HRDVKPDNFLMGLGKKGNLVYIIDFGLA 153
>pdb|1V0B|A Chain A, Crystal Structure Of The T198a Mutant Of Pfpk5
pdb|1V0B|B Chain B, Crystal Structure Of The T198a Mutant Of Pfpk5
Length = 288
Score = 48.5 bits (114), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 31/134 (23%), Positives = 66/134 (49%), Gaps = 3/134 (2%)
Query: 299 KVASGSYGDLYRG-TYCSQDVAIKVLKPERINSDMQKEFAQEVFIMRKVRHKNVVQFIGA 357
K+ G+YG +Y+ + A+K ++ E+ + + +E+ I+++++H N+V+
Sbjct: 9 KIGEGTYGVVYKAQNNYGETFALKKIRLEKEDEGIPSTTIREISILKELKHSNIVKLYDV 68
Query: 358 CTKPPSLCIVTEFMSGGSVYDYLHKLKGVFKLPSLLKVAIDVSKGMNYLHQNNIIHRDLK 417
L +V E + + L +G + + + + G+ Y H ++HRDLK
Sbjct: 69 IHTKKRLVLVFEHLDQ-DLKKLLDVCEGGLESVTAKSFLLQLLNGIAYCHDRRVLHRDLK 127
Query: 418 AANLLMD-ENEVSL 430
NLL++ E E+ +
Sbjct: 128 PQNLLINREGELKI 141
>pdb|1OB3|A Chain A, Structure Of P. Falciparum Pfpk5
pdb|1OB3|B Chain B, Structure Of P. Falciparum Pfpk5
pdb|1V0P|A Chain A, Structure Of P. Falciparum Pfpk5-Purvalanol B Ligand
Complex
pdb|1V0P|B Chain B, Structure Of P. Falciparum Pfpk5-Purvalanol B Ligand
Complex
Length = 288
Score = 48.5 bits (114), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 31/134 (23%), Positives = 66/134 (49%), Gaps = 3/134 (2%)
Query: 299 KVASGSYGDLYRG-TYCSQDVAIKVLKPERINSDMQKEFAQEVFIMRKVRHKNVVQFIGA 357
K+ G+YG +Y+ + A+K ++ E+ + + +E+ I+++++H N+V+
Sbjct: 9 KIGEGTYGVVYKAQNNYGETFALKKIRLEKEDEGIPSTTIREISILKELKHSNIVKLYDV 68
Query: 358 CTKPPSLCIVTEFMSGGSVYDYLHKLKGVFKLPSLLKVAIDVSKGMNYLHQNNIIHRDLK 417
L +V E + + L +G + + + + G+ Y H ++HRDLK
Sbjct: 69 IHTKKRLVLVFEHLDQ-DLKKLLDVCEGGLESVTAKSFLLQLLNGIAYCHDRRVLHRDLK 127
Query: 418 AANLLMD-ENEVSL 430
NLL++ E E+ +
Sbjct: 128 PQNLLINREGELKI 141
>pdb|3HNG|A Chain A, Crystal Structure Of Vegfr1 In Complex With
N-(4-chlorophenyl)-2-
((pyridin-4-ylmethyl)amino)benzamide
Length = 360
Score = 48.5 bits (114), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 34/121 (28%), Positives = 60/121 (49%), Gaps = 11/121 (9%)
Query: 278 KIPNDGTDVWEIDPKHLKFGSKVASGSYGDLYRGTY-------CSQDVAIKVLKPERINS 330
++P D + WE + LK G + G++G + + + + VA+K+LK E +
Sbjct: 14 RLPYDASK-WEFARERLKLGKSLGRGAFGKVVQASAFGIKKSPTCRTVAVKMLK-EGATA 71
Query: 331 DMQKEFAQEVFIMRKVRHK-NVVQFIGACTKPPS-LCIVTEFMSGGSVYDYLHKLKGVFK 388
K E+ I+ + H NVV +GACTK L ++ E+ G++ +YL + +F
Sbjct: 72 SEYKALMTELKILTHIGHHLNVVNLLGACTKQGGPLMVIVEYCKYGNLSNYLKSKRDLFF 131
Query: 389 L 389
L
Sbjct: 132 L 132
Score = 40.4 bits (93), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 21/60 (35%), Positives = 33/60 (55%), Gaps = 7/60 (11%)
Query: 385 GVFKLP----SLLKVAIDVSKGMNYLHQNNIIHRDLKAANLLMDENEVSLLLSLCLFTVS 440
G +K P L+ + V++GM +L IHRDL A N+L+ EN V + +C F ++
Sbjct: 190 GFYKEPITMEDLISYSFQVARGMEFLSSRKCIHRDLAARNILLSENNV---VKICDFGLA 246
>pdb|2RKU|A Chain A, Structure Of Plk1 In Complex With Bi2536
Length = 294
Score = 48.5 bits (114), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 32/105 (30%), Positives = 53/105 (50%), Gaps = 6/105 (5%)
Query: 322 VLKPERINSDMQKEFAQEVFIMRKVRHKNVVQFIGACTKPPSLCIVTEFMSGGSVYDYLH 381
+LKP + +++ + E+ I R + H++VV F G + +V E S+ + LH
Sbjct: 53 LLKPHQ-----REKMSMEISIHRSLAHQHVVGFHGFFEDNDFVFVVLELCRRRSLLE-LH 106
Query: 382 KLKGVFKLPSLLKVAIDVSKGMNYLHQNNIIHRDLKAANLLMDEN 426
K + P + G YLH+N +IHRDLK NL ++E+
Sbjct: 107 KRRKALTEPEARYYLRQIVLGCQYLHRNRVIHRDLKLGNLFLNED 151
>pdb|2V5Q|A Chain A, Crystal Structure Of Wild-type Plk-1 Kinase Domain In
Complex With A Selective Darpin
pdb|2V5Q|B Chain B, Crystal Structure Of Wild-type Plk-1 Kinase Domain In
Complex With A Selective Darpin
Length = 315
Score = 48.5 bits (114), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 32/105 (30%), Positives = 53/105 (50%), Gaps = 6/105 (5%)
Query: 322 VLKPERINSDMQKEFAQEVFIMRKVRHKNVVQFIGACTKPPSLCIVTEFMSGGSVYDYLH 381
+LKP + +++ + E+ I R + H++VV F G + +V E S+ + LH
Sbjct: 59 LLKPHQ-----REKMSMEISIHRSLAHQHVVGFHGFFEDNDFVFVVLELCRRRSLLE-LH 112
Query: 382 KLKGVFKLPSLLKVAIDVSKGMNYLHQNNIIHRDLKAANLLMDEN 426
K + P + G YLH+N +IHRDLK NL ++E+
Sbjct: 113 KRRKALTEPEARYYLRQIVLGCQYLHRNRVIHRDLKLGNLFLNED 157
>pdb|2YAC|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With
Nms-P937
pdb|4A4L|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
5-(2-Amino-Pyrimidin-4-Yl)-1h-Pyrrole Inhibitor
pdb|4A4O|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
2-
(2-Amino-Pyrimidin-4-Yl)-1,5,6,
7-Tetrahydro-Pyrrolopyridin- 4-One Inhibitor
Length = 311
Score = 48.5 bits (114), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 32/105 (30%), Positives = 53/105 (50%), Gaps = 6/105 (5%)
Query: 322 VLKPERINSDMQKEFAQEVFIMRKVRHKNVVQFIGACTKPPSLCIVTEFMSGGSVYDYLH 381
+LKP + +++ + E+ I R + H++VV F G + +V E S+ + LH
Sbjct: 55 LLKPHQ-----REKMSMEISIHRSLAHQHVVGFHGFFEDNDFVFVVLELCRRRSLLE-LH 108
Query: 382 KLKGVFKLPSLLKVAIDVSKGMNYLHQNNIIHRDLKAANLLMDEN 426
K + P + G YLH+N +IHRDLK NL ++E+
Sbjct: 109 KRRKALTEPEARYYLRQIVLGCQYLHRNRVIHRDLKLGNLFLNED 153
>pdb|3GC9|A Chain A, The Structure Of P38beta C119s, C162s In Complex With A
Dihydroquinazolinone Inhibitor
pdb|3GC9|B Chain B, The Structure Of P38beta C119s, C162s In Complex With A
Dihydroquinazolinone Inhibitor
Length = 370
Score = 48.5 bits (114), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 39/154 (25%), Positives = 71/154 (46%), Gaps = 22/154 (14%)
Query: 286 VWEIDPKHLKFGSKVASGSYGDLYRG--TYCSQDVAIKVLKPERINSDMQKEFAQEVFIM 343
VWE+ P+ L+ V SG+YG + Q VA+K L + + +E+ ++
Sbjct: 23 VWEV-PQRLQGLRPVGSGAYGSVCSAYDARLRQKVAVKKLSRPFQSLIHARRTYRELRLL 81
Query: 344 RKVRHKNVVQFIGACTKPPSL------CIVTEFMSGGSVYDYLHKLKGVFKLPSLLK--- 394
+ ++H+NV+ + T S+ +VT M L + K +L
Sbjct: 82 KHLKHENVIGLLDVFTPATSIEDFSEVYLVTTLMGA--------DLNNIVKSQALSDEHV 133
Query: 395 --VAIDVSKGMNYLHQNNIIHRDLKAANLLMDEN 426
+ + +G+ Y+H IIHRDLK +N+ ++E+
Sbjct: 134 QFLVYQLLRGLKYIHSAGIIHRDLKPSNVAVNED 167
>pdb|3KB7|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 311
Score = 48.5 bits (114), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 32/105 (30%), Positives = 53/105 (50%), Gaps = 6/105 (5%)
Query: 322 VLKPERINSDMQKEFAQEVFIMRKVRHKNVVQFIGACTKPPSLCIVTEFMSGGSVYDYLH 381
+LKP + +++ + E+ I R + H++VV F G + +V E S+ + LH
Sbjct: 55 LLKPHQ-----REKMSMEISIHRSLAHQHVVGFHGFFEDNDFVFVVLELCRRRSLLE-LH 108
Query: 382 KLKGVFKLPSLLKVAIDVSKGMNYLHQNNIIHRDLKAANLLMDEN 426
K + P + G YLH+N +IHRDLK NL ++E+
Sbjct: 109 KRRKALTEPEARYYLRQIVLGCQYLHRNRVIHRDLKLGNLFLNED 153
>pdb|3O96|A Chain A, Crystal Structure Of Human Akt1 With An Allosteric
Inhibitor
Length = 446
Score = 48.5 bits (114), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 49/201 (24%), Positives = 94/201 (46%), Gaps = 15/201 (7%)
Query: 232 EETEQLRAALEK--EVLKLERQGWPSHRSSSPTSEPEDTGMKSHPYHLKIPNDGTDVWEI 289
EE E+ A++ + LK + + RS SP+ +++G + L P + E
Sbjct: 97 EEREEWTTAIQTVADGLKKQEEEEMDFRSGSPS---DNSGAEEMEVSLAKPKHRVTMNEF 153
Query: 290 DPKHLKFGSKVASGSYGD--LYRGTYCSQDVAIKVLKPERI-NSDMQKEFAQEVFIMRKV 346
+ +LK + G++G L + + A+K+LK E I D E +++
Sbjct: 154 E--YLKL---LGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQNS 208
Query: 347 RHKNVVQFIGACTKPPSLCIVTEFMSGGSVYDYLHKLKGVFKLPSLLKVAIDVSKGMNYL 406
RH + + LC V E+ +GG ++ +L + + VF ++ ++YL
Sbjct: 209 RHPFLTALKYSFQTHDRLCFVMEYANGGELFFHLSRER-VFSEDRARFYGAEIVSALDYL 267
Query: 407 H-QNNIIHRDLKAANLLMDEN 426
H + N+++RDLK NL++D++
Sbjct: 268 HSEKNVVYRDLKLENLMLDKD 288
>pdb|3THB|A Chain A, Structure Of Plk1 Kinase Domain In Complex With A
Benzolactam-Derived Inhibitor
Length = 333
Score = 48.5 bits (114), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 32/105 (30%), Positives = 53/105 (50%), Gaps = 6/105 (5%)
Query: 322 VLKPERINSDMQKEFAQEVFIMRKVRHKNVVQFIGACTKPPSLCIVTEFMSGGSVYDYLH 381
+LKP + +++ + E+ I R + H++VV F G + +V E S+ + LH
Sbjct: 77 LLKPHQ-----REKMSMEISIHRSLAHQHVVGFHGFFEDNDFVFVVLELCRRRSLLE-LH 130
Query: 382 KLKGVFKLPSLLKVAIDVSKGMNYLHQNNIIHRDLKAANLLMDEN 426
K + P + G YLH+N +IHRDLK NL ++E+
Sbjct: 131 KRRKALTEPEARYYLRQIVLGCQYLHRNRVIHRDLKLGNLFLNED 175
>pdb|1YDT|E Chain E, Structure Of Camp-Dependent Protein Kinase,
Alpha-Catalytic Subunit In Complex With H89 Protein
Kinase Inhibitor N-[2-
(4-Bromocinnamylamino)ethyl]-5-Isoquinoline
pdb|1YDR|E Chain E, Structure Of Camp-Dependent Protein Kinase,
Alpha-Catalytic Subunit In Complex With H7 Protein
Kinase Inhibitor 1-(5-
Isoquinolinesulfonyl)-2-Methylpiperazine
pdb|1YDS|E Chain E, Structure Of Camp-Dependent Protein Kinase,
Alpha-Catalytic Subunit In Complex With H8 Protein
Kinase Inhibitor [n-(2-Methylamino)ethyl]-5-
Isoquinolinesulfonamide
Length = 350
Score = 48.5 bits (114), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 35/130 (26%), Positives = 65/130 (50%), Gaps = 4/130 (3%)
Query: 300 VASGSYGD--LYRGTYCSQDVAIKVLKPERINSDMQKEFA-QEVFIMRKVRHKNVVQFIG 356
+ +GS+G L + A+K+L +++ Q E E I++ V +V+
Sbjct: 49 LGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEF 108
Query: 357 ACTKPPSLCIVTEFMSGGSVYDYLHKLKGVFKLPSLLKVAIDVSKGMNYLHQNNIIHRDL 416
+ +L +V E+++GG ++ +L ++ G F P A + YLH ++I+RDL
Sbjct: 109 SFKDNSNLYMVMEYVAGGEMFSHLRRI-GRFSEPHARFYAAQIVLTFEYLHSLDLIYRDL 167
Query: 417 KAANLLMDEN 426
K NLL+D+
Sbjct: 168 KPENLLIDQQ 177
>pdb|2OU7|A Chain A, Structure Of The Catalytic Domain Of Human Polo-Like
Kinase 1
pdb|2OWB|A Chain A, Structure Of The Catalytic Domain Of Human Polo-Like
Kinase 1
pdb|3FC2|A Chain A, Plk1 In Complex With Bi6727
Length = 335
Score = 48.5 bits (114), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 32/105 (30%), Positives = 53/105 (50%), Gaps = 6/105 (5%)
Query: 322 VLKPERINSDMQKEFAQEVFIMRKVRHKNVVQFIGACTKPPSLCIVTEFMSGGSVYDYLH 381
+LKP + +++ + E+ I R + H++VV F G + +V E S+ + LH
Sbjct: 79 LLKPHQ-----REKMSMEISIHRSLAHQHVVGFHGFFEDNDFVFVVLELCRRRSLLE-LH 132
Query: 382 KLKGVFKLPSLLKVAIDVSKGMNYLHQNNIIHRDLKAANLLMDEN 426
K + P + G YLH+N +IHRDLK NL ++E+
Sbjct: 133 KRRKALTEPEARYYLRQIVLGCQYLHRNRVIHRDLKLGNLFLNED 177
>pdb|3FHI|A Chain A, Crystal Structure Of A Complex Between The Catalytic And
Regulatory (Ri{alpha}) Subunits Of Pka
Length = 350
Score = 48.1 bits (113), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 35/130 (26%), Positives = 65/130 (50%), Gaps = 4/130 (3%)
Query: 300 VASGSYGD--LYRGTYCSQDVAIKVLKPERINSDMQKEFA-QEVFIMRKVRHKNVVQFIG 356
+ +GS+G L + A+K+L +++ Q E E I++ V +V+
Sbjct: 49 LGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEF 108
Query: 357 ACTKPPSLCIVTEFMSGGSVYDYLHKLKGVFKLPSLLKVAIDVSKGMNYLHQNNIIHRDL 416
+ +L +V E+++GG ++ +L ++ G F P A + YLH ++I+RDL
Sbjct: 109 SFKDNSNLYMVMEYVAGGEMFSHLRRI-GRFSEPHARFYAAQIVLTFEYLHSLDLIYRDL 167
Query: 417 KAANLLMDEN 426
K NLL+D+
Sbjct: 168 KPENLLIDQQ 177
>pdb|2IZR|A Chain A, Structure Of Casein Kinase Gamma 3 In Complex With
Inhibitor
pdb|2IZS|A Chain A, Structure Of Casein Kinase Gamma 3 In Complex With
Inhibitor
pdb|2IZT|A Chain A, Structure Of Casein Kinase Gamma 3 In Complex With
Inhibitor
pdb|2IZU|A Chain A, Structure Of Casein Kinase Gamma 3 In Complex With
Inhibitor
Length = 330
Score = 48.1 bits (113), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 37/135 (27%), Positives = 67/135 (49%), Gaps = 10/135 (7%)
Query: 293 HLKFGSKVASGSYGDLYRGT--YCSQDVAIKV--LKPERINSDMQKEFAQEVFIMRKVRH 348
+ + G K+ G++G+L G Y ++ VAIK+ +K ++ F +++ +
Sbjct: 10 NFRVGKKIGCGNFGELRLGKNLYTNEYVAIKLEPMKSRAPQLHLEYRFYKQLGSGDGIPQ 69
Query: 349 KNVVQFIGACTKPPSLCIVTEFMSGGSVYDYLHKLKGVFKLPSLLKVAIDVSKGMNYLHQ 408
V + G C K ++ V E + G S+ D F L ++L +AI + M Y+H
Sbjct: 70 ---VYYFGPCGKYNAM--VLELL-GPSLEDLFDLCDRTFSLKTVLMIAIQLISRMEYVHS 123
Query: 409 NNIIHRDLKAANLLM 423
N+I+RD+K N L+
Sbjct: 124 KNLIYRDVKPENFLI 138
>pdb|2CHL|A Chain A, Structure Of Casein Kinase 1 Gamma 3
Length = 351
Score = 48.1 bits (113), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 37/135 (27%), Positives = 67/135 (49%), Gaps = 10/135 (7%)
Query: 293 HLKFGSKVASGSYGDLYRGT--YCSQDVAIKV--LKPERINSDMQKEFAQEVFIMRKVRH 348
+ + G K+ G++G+L G Y ++ VAIK+ +K ++ F +++ +
Sbjct: 31 NFRVGKKIGCGNFGELRLGKNLYTNEYVAIKLEPMKSRAPQLHLEYRFYKQLGSGDGIPQ 90
Query: 349 KNVVQFIGACTKPPSLCIVTEFMSGGSVYDYLHKLKGVFKLPSLLKVAIDVSKGMNYLHQ 408
V + G C K ++ V E + G S+ D F L ++L +AI + M Y+H
Sbjct: 91 ---VYYFGPCGKYNAM--VLELL-GPSLEDLFDLCDRTFSLKTVLMIAIQLISRMEYVHS 144
Query: 409 NNIIHRDLKAANLLM 423
N+I+RD+K N L+
Sbjct: 145 KNLIYRDVKPENFLI 159
>pdb|1J3H|A Chain A, Crystal Structure Of Apoenzyme Camp-Dependent Protein
Kinase Catalytic Subunit
pdb|1J3H|B Chain B, Crystal Structure Of Apoenzyme Camp-Dependent Protein
Kinase Catalytic Subunit
Length = 350
Score = 48.1 bits (113), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 35/130 (26%), Positives = 65/130 (50%), Gaps = 4/130 (3%)
Query: 300 VASGSYGD--LYRGTYCSQDVAIKVLKPERINSDMQKEFA-QEVFIMRKVRHKNVVQFIG 356
+ +GS+G L + A+K+L +++ Q E E I++ V +V+
Sbjct: 49 LGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEF 108
Query: 357 ACTKPPSLCIVTEFMSGGSVYDYLHKLKGVFKLPSLLKVAIDVSKGMNYLHQNNIIHRDL 416
+ +L +V E+++GG ++ +L ++ G F P A + YLH ++I+RDL
Sbjct: 109 SFKDNSNLYMVMEYVAGGEMFSHLRRI-GRFSEPHARFYAAQIVLTFEYLHSLDLIYRDL 167
Query: 417 KAANLLMDEN 426
K NLL+D+
Sbjct: 168 KPENLLIDQQ 177
>pdb|2QUR|A Chain A, Crystal Structure Of F327aK285P MUTANT OF CAMP-Dependent
Protein Kinase
Length = 350
Score = 48.1 bits (113), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 35/130 (26%), Positives = 65/130 (50%), Gaps = 4/130 (3%)
Query: 300 VASGSYGD--LYRGTYCSQDVAIKVLKPERINSDMQKEFA-QEVFIMRKVRHKNVVQFIG 356
+ +GS+G L + A+K+L +++ Q E E I++ V +V+
Sbjct: 49 LGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEF 108
Query: 357 ACTKPPSLCIVTEFMSGGSVYDYLHKLKGVFKLPSLLKVAIDVSKGMNYLHQNNIIHRDL 416
+ +L +V E+++GG ++ +L ++ G F P A + YLH ++I+RDL
Sbjct: 109 SFKDNSNLYMVMEYVAGGEMFSHLRRI-GRFSEPHARFYAAQIVLTFEYLHSLDLIYRDL 167
Query: 417 KAANLLMDEN 426
K NLL+D+
Sbjct: 168 KPENLLIDQQ 177
>pdb|1RDQ|E Chain E, Hydrolysis Of Atp In The Crystal Of Y204a Mutant Of
Camp-Dependent Protein Kinase
Length = 350
Score = 48.1 bits (113), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 35/130 (26%), Positives = 65/130 (50%), Gaps = 4/130 (3%)
Query: 300 VASGSYGD--LYRGTYCSQDVAIKVLKPERINSDMQKEFA-QEVFIMRKVRHKNVVQFIG 356
+ +GS+G L + A+K+L +++ Q E E I++ V +V+
Sbjct: 49 LGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEF 108
Query: 357 ACTKPPSLCIVTEFMSGGSVYDYLHKLKGVFKLPSLLKVAIDVSKGMNYLHQNNIIHRDL 416
+ +L +V E+++GG ++ +L ++ G F P A + YLH ++I+RDL
Sbjct: 109 SFKDNSNLYMVMEYVAGGEMFSHLRRI-GRFSEPHARFYAAQIVLTFEYLHSLDLIYRDL 167
Query: 417 KAANLLMDEN 426
K NLL+D+
Sbjct: 168 KPENLLIDQQ 177
>pdb|1L3R|E Chain E, Crystal Structure Of A Transition State Mimic Of The
Catalytic Subunit Of Camp-Dependent Protein Kinase
pdb|3TNP|C Chain C, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
pdb|3TNP|F Chain F, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
pdb|3TNQ|B Chain B, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
Length = 350
Score = 48.1 bits (113), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 35/130 (26%), Positives = 65/130 (50%), Gaps = 4/130 (3%)
Query: 300 VASGSYGD--LYRGTYCSQDVAIKVLKPERINSDMQKEFA-QEVFIMRKVRHKNVVQFIG 356
+ +GS+G L + A+K+L +++ Q E E I++ V +V+
Sbjct: 49 LGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEF 108
Query: 357 ACTKPPSLCIVTEFMSGGSVYDYLHKLKGVFKLPSLLKVAIDVSKGMNYLHQNNIIHRDL 416
+ +L +V E+++GG ++ +L ++ G F P A + YLH ++I+RDL
Sbjct: 109 SFKDNSNLYMVMEYVAGGEMFSHLRRI-GRFXEPHARFYAAQIVLTFEYLHSLDLIYRDL 167
Query: 417 KAANLLMDEN 426
K NLL+D+
Sbjct: 168 KPENLLIDQQ 177
>pdb|1JBP|E Chain E, Crystal Structure Of The Catalytic Subunit Of Camp-
Dependent Protein Kinase Complexed With A Substrate
Peptide, Adp And Detergent
Length = 350
Score = 48.1 bits (113), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 35/130 (26%), Positives = 65/130 (50%), Gaps = 4/130 (3%)
Query: 300 VASGSYGD--LYRGTYCSQDVAIKVLKPERINSDMQKEFA-QEVFIMRKVRHKNVVQFIG 356
+ +GS+G L + A+K+L +++ Q E E I++ V +V+
Sbjct: 49 LGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEF 108
Query: 357 ACTKPPSLCIVTEFMSGGSVYDYLHKLKGVFKLPSLLKVAIDVSKGMNYLHQNNIIHRDL 416
+ +L +V E+++GG ++ +L ++ G F P A + YLH ++I+RDL
Sbjct: 109 SFKDNSNLYMVMEYVAGGEMFSHLRRI-GRFSEPHARFYAAQIVLTFEYLHSLDLIYRDL 167
Query: 417 KAANLLMDEN 426
K NLL+D+
Sbjct: 168 KPENLLIDQQ 177
>pdb|2ERZ|E Chain E, Crystal Structure Of C-amp Dependent Kinase (pka) Bound To
Hydroxyfasudil
Length = 351
Score = 48.1 bits (113), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 35/130 (26%), Positives = 65/130 (50%), Gaps = 4/130 (3%)
Query: 300 VASGSYGD--LYRGTYCSQDVAIKVLKPERINSDMQKEFA-QEVFIMRKVRHKNVVQFIG 356
+ +GS+G L + A+K+L +++ Q E E I++ V +V+
Sbjct: 50 LGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEF 109
Query: 357 ACTKPPSLCIVTEFMSGGSVYDYLHKLKGVFKLPSLLKVAIDVSKGMNYLHQNNIIHRDL 416
+ +L +V E+++GG ++ +L ++ G F P A + YLH ++I+RDL
Sbjct: 110 SFKDNSNLYMVMEYVAGGEMFSHLRRI-GRFSEPHARFYAAQIVLTFEYLHSLDLIYRDL 168
Query: 417 KAANLLMDEN 426
K NLL+D+
Sbjct: 169 KPENLLIDQQ 178
>pdb|2GNJ|A Chain A, Pka Three Fold Mutant Model Of Rho-Kinase With Y-27632
pdb|2GNL|A Chain A, Pka Threefold Mutant Model Of Rho-Kinase With Inhibitor H-
1152p
Length = 350
Score = 48.1 bits (113), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 35/130 (26%), Positives = 64/130 (49%), Gaps = 4/130 (3%)
Query: 300 VASGSYGD--LYRGTYCSQDVAIKVLKPERINSDMQKEFA-QEVFIMRKVRHKNVVQFIG 356
+ +GS+G L + A+K+L +++ Q E E I++ V +V+
Sbjct: 49 IGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEF 108
Query: 357 ACTKPPSLCIVTEFMSGGSVYDYLHKLKGVFKLPSLLKVAIDVSKGMNYLHQNNIIHRDL 416
+ +L +V E++ GG ++ +L ++ G F P A + YLH ++I+RDL
Sbjct: 109 SFKDNSNLYMVMEYVPGGEMFSHLRRI-GRFSEPHARFYAAQIVLTFEYLHSLDLIYRDL 167
Query: 417 KAANLLMDEN 426
K NLL+D+
Sbjct: 168 KPENLLIDQQ 177
>pdb|1BKX|A Chain A, A Binary Complex Of The Catalytic Subunit Of
Camp-Dependent Protein Kinase And Adenosine Further
Defines Conformational Flexibility
pdb|1BX6|A Chain A, Crystal Structure Of The Potent Natural Product Inhibitor
Balanol In Complex With The Catalytic Subunit Of Camp-
Dependent Protein Kinase
Length = 350
Score = 48.1 bits (113), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 35/130 (26%), Positives = 65/130 (50%), Gaps = 4/130 (3%)
Query: 300 VASGSYGD--LYRGTYCSQDVAIKVLKPERINSDMQKEFA-QEVFIMRKVRHKNVVQFIG 356
+ +GS+G L + A+K+L +++ Q E E I++ V +V+
Sbjct: 49 LGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEF 108
Query: 357 ACTKPPSLCIVTEFMSGGSVYDYLHKLKGVFKLPSLLKVAIDVSKGMNYLHQNNIIHRDL 416
+ +L +V E+++GG ++ +L ++ G F P A + YLH ++I+RDL
Sbjct: 109 SFKDNSNLYMVMEYVAGGEMFSHLRRI-GRFSEPHARFYAAQIVLTFEYLHSLDLIYRDL 167
Query: 417 KAANLLMDEN 426
K NLL+D+
Sbjct: 168 KPENLLIDQQ 177
>pdb|3PVB|A Chain A, Crystal Structure Of (73-244)ria:c Holoenzyme Of
Camp-Dependent Protein Kinase
Length = 345
Score = 48.1 bits (113), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 35/130 (26%), Positives = 65/130 (50%), Gaps = 4/130 (3%)
Query: 300 VASGSYGD--LYRGTYCSQDVAIKVLKPERINSDMQKEFA-QEVFIMRKVRHKNVVQFIG 356
+ +GS+G L + A+K+L +++ Q E E I++ V +V+
Sbjct: 44 LGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEF 103
Query: 357 ACTKPPSLCIVTEFMSGGSVYDYLHKLKGVFKLPSLLKVAIDVSKGMNYLHQNNIIHRDL 416
+ +L +V E+++GG ++ +L ++ G F P A + YLH ++I+RDL
Sbjct: 104 SFKDNSNLYMVMEYVAGGEMFSHLRRI-GRFXEPHARFYAAQIVLTFEYLHSLDLIYRDL 162
Query: 417 KAANLLMDEN 426
K NLL+D+
Sbjct: 163 KPENLLIDQQ 172
>pdb|2QCS|A Chain A, A Complex Structure Between The Catalytic And Regulatory
Subunit Of Protein Kinase A That Represents The
Inhibited State
pdb|2CPK|E Chain E, Crystal Structure Of The Catalytic Subunit Of Cyclic
Adenosine Monophosphate-Dependent Protein Kinase
pdb|4DG0|E Chain E, Crystal Structure Of Myristoylated Wt Catalytic Subunit Of
Camp- Dependent Protein Kinase In Complex With Sp20 And
Amp-Pnp
pdb|4DG2|E Chain E, Crystal Structure Of Myristoylated Wt Catalytic Subunit Of
Camp- Dependent Protein Kinase In Complex With Sp20
pdb|4DH1|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With Low Mg2+, Atp And Ip20
pdb|4DH3|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Atp And Ip20
pdb|4DH5|A Chain A, Room Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Adp,
Phosphate, And Ip20
pdb|4DH7|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Amp-pnp And
Ip20'
pdb|4DH8|A Chain A, Room Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Amp-pnp And
Ip20
Length = 350
Score = 48.1 bits (113), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 35/130 (26%), Positives = 65/130 (50%), Gaps = 4/130 (3%)
Query: 300 VASGSYGD--LYRGTYCSQDVAIKVLKPERINSDMQKEFA-QEVFIMRKVRHKNVVQFIG 356
+ +GS+G L + A+K+L +++ Q E E I++ V +V+
Sbjct: 49 LGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEF 108
Query: 357 ACTKPPSLCIVTEFMSGGSVYDYLHKLKGVFKLPSLLKVAIDVSKGMNYLHQNNIIHRDL 416
+ +L +V E+++GG ++ +L ++ G F P A + YLH ++I+RDL
Sbjct: 109 SFKDNSNLYMVMEYVAGGEMFSHLRRI-GRFXEPHARFYAAQIVLTFEYLHSLDLIYRDL 167
Query: 417 KAANLLMDEN 426
K NLL+D+
Sbjct: 168 KPENLLIDQQ 177
>pdb|1APM|E Chain E, 2.0 Angstrom Refined Crystal Structure Of The Catalytic
Subunit Of Camp-Dependent Protein Kinase Complexed With
A Peptide Inhibitor And Detergent
Length = 350
Score = 48.1 bits (113), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 35/130 (26%), Positives = 65/130 (50%), Gaps = 4/130 (3%)
Query: 300 VASGSYGD--LYRGTYCSQDVAIKVLKPERINSDMQKEFA-QEVFIMRKVRHKNVVQFIG 356
+ +GS+G L + A+K+L +++ Q E E I++ V +V+
Sbjct: 49 LGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEF 108
Query: 357 ACTKPPSLCIVTEFMSGGSVYDYLHKLKGVFKLPSLLKVAIDVSKGMNYLHQNNIIHRDL 416
+ +L +V E+++GG ++ +L ++ G F P A + YLH ++I+RDL
Sbjct: 109 SFKDNSNLYMVMEYVAGGEMFSHLRRI-GRFAEPHARFYAAQIVLTFEYLHSLDLIYRDL 167
Query: 417 KAANLLMDEN 426
K NLL+D+
Sbjct: 168 KPENLLIDQQ 177
>pdb|4DFY|A Chain A, Crystal Structure Of R194a Mutant Of Camp-Dependent
Protein Kinase With Unphosphorylated Activation Loop
pdb|4DFY|E Chain E, Crystal Structure Of R194a Mutant Of Camp-Dependent
Protein Kinase With Unphosphorylated Activation Loop
Length = 371
Score = 48.1 bits (113), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 35/130 (26%), Positives = 65/130 (50%), Gaps = 4/130 (3%)
Query: 300 VASGSYGD--LYRGTYCSQDVAIKVLKPERINSDMQKEFA-QEVFIMRKVRHKNVVQFIG 356
+ +GS+G L + A+K+L +++ Q E E I++ V +V+
Sbjct: 70 LGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEF 129
Query: 357 ACTKPPSLCIVTEFMSGGSVYDYLHKLKGVFKLPSLLKVAIDVSKGMNYLHQNNIIHRDL 416
+ +L +V E+++GG ++ +L ++ G F P A + YLH ++I+RDL
Sbjct: 130 SFKDNSNLYMVMEYVAGGEMFSHLRRI-GRFSEPHARFYAAQIVLTFEYLHSLDLIYRDL 188
Query: 417 KAANLLMDEN 426
K NLL+D+
Sbjct: 189 KPENLLIDQQ 198
>pdb|1SYK|A Chain A, Crystal Structure Of E230q Mutant Of Camp-Dependent
Protein Kinase Reveals Unexpected Apoenzyme Conformation
pdb|1SYK|B Chain B, Crystal Structure Of E230q Mutant Of Camp-Dependent
Protein Kinase Reveals Unexpected Apoenzyme Conformation
Length = 350
Score = 48.1 bits (113), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 35/130 (26%), Positives = 65/130 (50%), Gaps = 4/130 (3%)
Query: 300 VASGSYGD--LYRGTYCSQDVAIKVLKPERINSDMQKEFA-QEVFIMRKVRHKNVVQFIG 356
+ +GS+G L + A+K+L +++ Q E E I++ V +V+
Sbjct: 49 LGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEF 108
Query: 357 ACTKPPSLCIVTEFMSGGSVYDYLHKLKGVFKLPSLLKVAIDVSKGMNYLHQNNIIHRDL 416
+ +L +V E+++GG ++ +L ++ G F P A + YLH ++I+RDL
Sbjct: 109 SFKDNSNLYMVMEYVAGGEMFSHLRRI-GRFSEPHARFYAAQIVLTFEYLHSLDLIYRDL 167
Query: 417 KAANLLMDEN 426
K NLL+D+
Sbjct: 168 KPENLLIDQQ 177
>pdb|1FMO|E Chain E, Crystal Structure Of A Polyhistidine-Tagged Recombinant
Catalytic Subunit Of Camp-Dependent Protein Kinase
Complexed With The Peptide Inhibitor Pki(5-24) And
Adenosine
pdb|1JLU|E Chain E, Crystal Structure Of The Catalytic Subunit Of
Camp-dependent Protein Kinase Complexed With A
Phosphorylated Substrate Peptide And Detergent
pdb|1RE8|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase
Complexed With Balanol Analog 2
pdb|1REJ|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase
Complexed With Balanol Analog 1
pdb|1REK|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase
Complexed With Balanol Analog 8
pdb|2QVS|E Chain E, Crystal Structure Of Type Iia Holoenzyme Of Camp-Dependent
Protein Kinase
pdb|3FJQ|E Chain E, Crystal Structure Of Camp-Dependent Protein Kinase
Catalytic Subunit Alpha In Complex With Peptide
Inhibitor Pki Alpha (6-25)
pdb|3IDB|A Chain A, Crystal Structure Of (108-268)riib:c Holoenzyme Of Camp-
Dependent Protein Kinase
pdb|3IDC|A Chain A, Crystal Structure Of (102-265)riib:c Holoenzyme Of Camp-
Dependent Protein Kinase
pdb|3O7L|D Chain D, Crystal Structure Of Phospholamban (1-19):pka
C-Subunit:amp-Pnp:mg2+ Complex
pdb|3OW3|A Chain A, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|1ATP|E Chain E, 2.2 Angstrom Refined Crystal Structure Of The Catalytic
Subunit Of Camp-Dependent Protein Kinase Complexed With
Mnatp And A Peptide Inhibitor
pdb|4DIN|A Chain A, Novel Localization And Quaternary Structure Of The Pka Ri
Beta Holoenzyme
Length = 350
Score = 48.1 bits (113), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 35/130 (26%), Positives = 65/130 (50%), Gaps = 4/130 (3%)
Query: 300 VASGSYGD--LYRGTYCSQDVAIKVLKPERINSDMQKEFA-QEVFIMRKVRHKNVVQFIG 356
+ +GS+G L + A+K+L +++ Q E E I++ V +V+
Sbjct: 49 LGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEF 108
Query: 357 ACTKPPSLCIVTEFMSGGSVYDYLHKLKGVFKLPSLLKVAIDVSKGMNYLHQNNIIHRDL 416
+ +L +V E+++GG ++ +L ++ G F P A + YLH ++I+RDL
Sbjct: 109 SFKDNSNLYMVMEYVAGGEMFSHLRRI-GRFSEPHARFYAAQIVLTFEYLHSLDLIYRDL 167
Query: 417 KAANLLMDEN 426
K NLL+D+
Sbjct: 168 KPENLLIDQQ 177
>pdb|3QAM|E Chain E, Crystal Structure Of Glu208ala Mutant Of Catalytic Subunit
Of Camp- Dependent Protein Kinase
Length = 350
Score = 48.1 bits (113), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 35/130 (26%), Positives = 65/130 (50%), Gaps = 4/130 (3%)
Query: 300 VASGSYGD--LYRGTYCSQDVAIKVLKPERINSDMQKEFA-QEVFIMRKVRHKNVVQFIG 356
+ +GS+G L + A+K+L +++ Q E E I++ V +V+
Sbjct: 49 LGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEF 108
Query: 357 ACTKPPSLCIVTEFMSGGSVYDYLHKLKGVFKLPSLLKVAIDVSKGMNYLHQNNIIHRDL 416
+ +L +V E+++GG ++ +L ++ G F P A + YLH ++I+RDL
Sbjct: 109 SFKDNSNLYMVMEYVAGGEMFSHLRRI-GRFSEPHARFYAAQIVLTFEYLHSLDLIYRDL 167
Query: 417 KAANLLMDEN 426
K NLL+D+
Sbjct: 168 KPENLLIDQQ 177
>pdb|3QAL|E Chain E, Crystal Structure Of Arg280ala Mutant Of Catalytic Subunit
Of Camp- Dependent Protein Kinase
Length = 350
Score = 48.1 bits (113), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 35/130 (26%), Positives = 65/130 (50%), Gaps = 4/130 (3%)
Query: 300 VASGSYGD--LYRGTYCSQDVAIKVLKPERINSDMQKEFA-QEVFIMRKVRHKNVVQFIG 356
+ +GS+G L + A+K+L +++ Q E E I++ V +V+
Sbjct: 49 LGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEF 108
Query: 357 ACTKPPSLCIVTEFMSGGSVYDYLHKLKGVFKLPSLLKVAIDVSKGMNYLHQNNIIHRDL 416
+ +L +V E+++GG ++ +L ++ G F P A + YLH ++I+RDL
Sbjct: 109 SFKDNSNLYMVMEYVAGGEMFSHLRRI-GRFSEPHARFYAAQIVLTFEYLHSLDLIYRDL 167
Query: 417 KAANLLMDEN 426
K NLL+D+
Sbjct: 168 KPENLLIDQQ 177
>pdb|4DG3|E Chain E, Crystal Structure Of R336a Mutant Of Camp-dependent
Protein Kinase With Unphosphorylated Turn Motif
Length = 371
Score = 48.1 bits (113), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 35/130 (26%), Positives = 65/130 (50%), Gaps = 4/130 (3%)
Query: 300 VASGSYGD--LYRGTYCSQDVAIKVLKPERINSDMQKEFA-QEVFIMRKVRHKNVVQFIG 356
+ +GS+G L + A+K+L +++ Q E E I++ V +V+
Sbjct: 70 LGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEF 129
Query: 357 ACTKPPSLCIVTEFMSGGSVYDYLHKLKGVFKLPSLLKVAIDVSKGMNYLHQNNIIHRDL 416
+ +L +V E+++GG ++ +L ++ G F P A + YLH ++I+RDL
Sbjct: 130 SFKDNSNLYMVMEYVAGGEMFSHLRRI-GRFXEPHARFYAAQIVLTFEYLHSLDLIYRDL 188
Query: 417 KAANLLMDEN 426
K NLL+D+
Sbjct: 189 KPENLLIDQQ 198
>pdb|4DFX|E Chain E, Crystal Structure Of Myristoylated K7c Catalytic Subunit
Of Camp- Dependent Protein Kinase In Complex With Sp20
And Amp-Pnp
pdb|4DFZ|E Chain E, Crystal Structure Of Myristoylated K7c Catalytic Subunit
Of Camp- Dependent Protein Kinase In Complex With Sp20
Length = 350
Score = 48.1 bits (113), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 35/130 (26%), Positives = 65/130 (50%), Gaps = 4/130 (3%)
Query: 300 VASGSYGD--LYRGTYCSQDVAIKVLKPERINSDMQKEFA-QEVFIMRKVRHKNVVQFIG 356
+ +GS+G L + A+K+L +++ Q E E I++ V +V+
Sbjct: 49 LGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEF 108
Query: 357 ACTKPPSLCIVTEFMSGGSVYDYLHKLKGVFKLPSLLKVAIDVSKGMNYLHQNNIIHRDL 416
+ +L +V E+++GG ++ +L ++ G F P A + YLH ++I+RDL
Sbjct: 109 SFKDNSNLYMVMEYVAGGEMFSHLRRI-GRFXEPHARFYAAQIVLTFEYLHSLDLIYRDL 167
Query: 417 KAANLLMDEN 426
K NLL+D+
Sbjct: 168 KPENLLIDQQ 177
>pdb|2V7O|A Chain A, Crystal Structure Of Human Calcium-Calmodulin-Dependent
Protein Kinase Ii Gamma
Length = 336
Score = 48.1 bits (113), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 27/127 (21%), Positives = 68/127 (53%), Gaps = 1/127 (0%)
Query: 315 SQDVAIKVLKPERINSDMQKEFAQEVFIMRKVRHKNVVQFIGACTKPPSLCIVTEFMSGG 374
+Q+ A K++ +++++ ++ +E I R ++H N+V+ + ++ +V + ++GG
Sbjct: 56 TQEYAAKIINTKKLSARDHQKLEREARICRLLKHPNIVRLHDSISEEGFHYLVFDLVTGG 115
Query: 375 SVYDYLHKLKGVFKLPSLLKVAIDVSKGMNYLHQNNIIHRDLKAANLLMDENEVSLLLSL 434
+++ + + + + + +N++HQ++I+HRDLK NLL+ + L
Sbjct: 116 ELFEDI-VAREYYSEADASHCIHQILESVNHIHQHDIVHRDLKPENLLLASKCKGAAVKL 174
Query: 435 CLFTVSI 441
F ++I
Sbjct: 175 ADFGLAI 181
>pdb|2ZV2|A Chain A, Crystal Structure Of Human CalciumCALMODULIN-Dependent
Protein Kinase Kinase 2, Beta, Camkk2 Kinase Domain In
Complex With Sto-609
Length = 298
Score = 48.1 bits (113), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 32/103 (31%), Positives = 54/103 (52%), Gaps = 20/103 (19%)
Query: 334 KEFAQEVFIMRKVRHKNVVQFIGACTKPPS--LCIVTEFMSGGSVYDYLHKLKGVFKLPS 391
++ QE+ I++K+ H NVV+ + P L +V E ++ G V ++P+
Sbjct: 81 EQVYQEIAILKKLDHPNVVKLVEVLDDPNEDHLYMVFELVNQGPV----------MEVPT 130
Query: 392 LLKVA--------IDVSKGMNYLHQNNIIHRDLKAANLLMDEN 426
L ++ D+ KG+ YLH IIHRD+K +NLL+ E+
Sbjct: 131 LKPLSEDQARFYFQDLIKGIEYLHYQKIIHRDIKPSNLLVGED 173
>pdb|2XK9|A Chain A, Structural Analysis Of Checkpoint Kinase 2 (Chk2) In
Complex With Inhibitor Pv1533
Length = 322
Score = 47.8 bits (112), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 50/193 (25%), Positives = 87/193 (45%), Gaps = 22/193 (11%)
Query: 291 PKHLK----FGSKVASGSYGDL---YRGTYCSQDVAIKVLKPERINSDMQKE------FA 337
PK L+ + SG+ G++ + C + VAIK++ + +E
Sbjct: 4 PKALRDEYIMSKTLGSGACGEVKLAFERKTCKK-VAIKIISKRKFAIGSAREADPALNVE 62
Query: 338 QEVFIMRKVRHKNVVQFIGACTKPPSLCIVTEFMSGGSVYDYLHKLKGVFKLPSLLKVAI 397
E+ I++K+ H +++ I IV E M GG ++D + K + + L
Sbjct: 63 TEIEILKKLNHPCIIK-IKNFFDAEDYYIVLELMEGGELFDKVVGNKRLKEATCKLYF-Y 120
Query: 398 DVSKGMNYLHQNNIIHRDLKAANLLMDENEVSLLLSLCLFTVSILFCGKGRELISL---- 453
+ + YLH+N IIHRDLK N+L+ E L+ + F S + G+ + +L
Sbjct: 121 QMLLAVQYLHENGIIHRDLKPENVLLSSQEEDCLIKITDFGHSKIL-GETSLMRTLCGTP 179
Query: 454 -FLGNDVLLQFGT 465
+L +VL+ GT
Sbjct: 180 TYLAPEVLVSVGT 192
>pdb|2YCR|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv976
Length = 323
Score = 47.8 bits (112), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 50/193 (25%), Positives = 87/193 (45%), Gaps = 22/193 (11%)
Query: 291 PKHLK----FGSKVASGSYGDL---YRGTYCSQDVAIKVLKPERINSDMQKE------FA 337
PK L+ + SG+ G++ + C + VAIK++ + +E
Sbjct: 5 PKALRDEYIMSKTLGSGACGEVKLAFERKTCKK-VAIKIISKRKFAIGSAREADPALNVE 63
Query: 338 QEVFIMRKVRHKNVVQFIGACTKPPSLCIVTEFMSGGSVYDYLHKLKGVFKLPSLLKVAI 397
E+ I++K+ H +++ I IV E M GG ++D + K + + L
Sbjct: 64 TEIEILKKLNHPCIIK-IKNFFDAEDYYIVLELMEGGELFDKVVGNKRLKEATCKLYF-Y 121
Query: 398 DVSKGMNYLHQNNIIHRDLKAANLLMDENEVSLLLSLCLFTVSILFCGKGRELISL---- 453
+ + YLH+N IIHRDLK N+L+ E L+ + F S + G+ + +L
Sbjct: 122 QMLLAVQYLHENGIIHRDLKPENVLLSSQEEDCLIKITDFGHSKIL-GETSLMRTLCGTP 180
Query: 454 -FLGNDVLLQFGT 465
+L +VL+ GT
Sbjct: 181 TYLAPEVLVSVGT 193
>pdb|2W0J|A Chain A, Crystal Structure Of Chk2 In Complex With Nsc 109555, A
Specific Inhibitor
pdb|2W7X|A Chain A, Cellular Inhibition Of Checkpoint Kinase 2 And
Potentiation Of Cytotoxic Drugs By Novel Chk2 Inhibitor
Pv1019
pdb|2YIQ|A Chain A, Structural Analysis Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1322
pdb|2YIR|A Chain A, Structural Analysis Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1352
pdb|2YIT|A Chain A, Structural Analysis Of Checkpoint Kinase 2 In Complex With
Pv1162, A Novel Inhibitor
pdb|2YCQ|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1115
pdb|2YCS|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Pv788
Length = 323
Score = 47.8 bits (112), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 50/193 (25%), Positives = 87/193 (45%), Gaps = 22/193 (11%)
Query: 291 PKHLK----FGSKVASGSYGDL---YRGTYCSQDVAIKVLKPERINSDMQKE------FA 337
PK L+ + SG+ G++ + C + VAIK++ + +E
Sbjct: 5 PKALRDEYIMSKTLGSGACGEVKLAFERKTCKK-VAIKIISKRKFAIGSAREADPALNVE 63
Query: 338 QEVFIMRKVRHKNVVQFIGACTKPPSLCIVTEFMSGGSVYDYLHKLKGVFKLPSLLKVAI 397
E+ I++K+ H +++ I IV E M GG ++D + K + + L
Sbjct: 64 TEIEILKKLNHPCIIK-IKNFFDAEDYYIVLELMEGGELFDKVVGNKRLKEATCKLYF-Y 121
Query: 398 DVSKGMNYLHQNNIIHRDLKAANLLMDENEVSLLLSLCLFTVSILFCGKGRELISL---- 453
+ + YLH+N IIHRDLK N+L+ E L+ + F S + G+ + +L
Sbjct: 122 QMLLAVQYLHENGIIHRDLKPENVLLSSQEEDCLIKITDFGHSKIL-GETSLMRTLCGTP 180
Query: 454 -FLGNDVLLQFGT 465
+L +VL+ GT
Sbjct: 181 TYLAPEVLVSVGT 193
>pdb|3TXO|A Chain A, Pkc Eta Kinase In Complex With A Naphthyridine
Length = 353
Score = 47.8 bits (112), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 41/164 (25%), Positives = 69/164 (42%), Gaps = 12/164 (7%)
Query: 293 HLKFGSKVASGSYGD--LYRGTYCSQDVAIKVLKPERI--NSDMQKEFAQEVFIMRKVRH 348
+ +F + GS+G L R A+KVLK + I + D++ ++ + H
Sbjct: 24 NFEFIRVLGKGSFGKVMLARVKETGDLYAVKVLKKDVILQDDDVECTMTEKRILSLARNH 83
Query: 349 KNVVQFIGACTKPPSLCIVTEFMSGGSVYDYLHKLKGVFKLPSLLKVAIDVSKGMNYLHQ 408
+ Q P L V EF++GG + ++ K + F A ++ + +LH
Sbjct: 84 PFLTQLFCCFQTPDRLFFVMEFVNGGDLMFHIQKSRR-FDEARARFYAAEIISALMFLHD 142
Query: 409 NNIIHRDLKAANLLMDENEVSLLL-------SLCLFTVSILFCG 445
II+RDLK N+L+D L +C + FCG
Sbjct: 143 KGIIYRDLKLDNVLLDHEGHCKLADFGMCKEGICNGVTTATFCG 186
>pdb|2YCF|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1531
Length = 322
Score = 47.8 bits (112), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 50/193 (25%), Positives = 87/193 (45%), Gaps = 22/193 (11%)
Query: 291 PKHLK----FGSKVASGSYGDL---YRGTYCSQDVAIKVLKPERINSDMQKE------FA 337
PK L+ + SG+ G++ + C + VAIK++ + +E
Sbjct: 5 PKALRDEYIMSKTLGSGACGEVKLAFERKTCKK-VAIKIISKRKFAIGSAREADPALNVE 63
Query: 338 QEVFIMRKVRHKNVVQFIGACTKPPSLCIVTEFMSGGSVYDYLHKLKGVFKLPSLLKVAI 397
E+ I++K+ H +++ I IV E M GG ++D + K + + L
Sbjct: 64 TEIEILKKLNHPCIIK-IKNFFDAEDYYIVLELMEGGELFDKVVGNKRLKEATCKLYF-Y 121
Query: 398 DVSKGMNYLHQNNIIHRDLKAANLLMDENEVSLLLSLCLFTVSILFCGKGRELISL---- 453
+ + YLH+N IIHRDLK N+L+ E L+ + F S + G+ + +L
Sbjct: 122 QMLLAVQYLHENGIIHRDLKPENVLLSSQEEDCLIKITDFGHSKIL-GETSLMRTLCGTP 180
Query: 454 -FLGNDVLLQFGT 465
+L +VL+ GT
Sbjct: 181 TYLAPEVLVSVGT 193
>pdb|2WQM|A Chain A, Structure Of Apo Human Nek7
pdb|2WQN|A Chain A, Structure Of Adp-Bound Human Nek7
Length = 310
Score = 47.8 bits (112), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 32/151 (21%), Positives = 70/151 (46%), Gaps = 8/151 (5%)
Query: 293 HLKFGSKVASGSYGDLYRGTYCSQDVAIKVLKPERI----NSDMQKEFAQEVFIMRKVRH 348
+ + K+ G + ++YR C D LK +I ++ + + +E+ +++++ H
Sbjct: 33 NFRIEKKIGRGQFSEVYRAA-CLLDGVPVALKKVQIFDLMDAKARADCIKEIDLLKQLNH 91
Query: 349 KNVVQFIGACTKPPSLCIVTEFMSGGSV---YDYLHKLKGVFKLPSLLKVAIDVSKGMNY 405
NV+++ + + L IV E G + + K K + ++ K + + + +
Sbjct: 92 PNVIKYYASFIEDNELNIVLELADAGDLSRMIKHFKKQKRLIPERTVWKYFVQLCSALEH 151
Query: 406 LHQNNIIHRDLKAANLLMDENEVSLLLSLCL 436
+H ++HRD+K AN+ + V L L L
Sbjct: 152 MHSRRVMHRDIKPANVFITATGVVKLGDLGL 182
>pdb|2CN5|A Chain A, Crystal Structure Of Human Chk2 In Complex With Adp
pdb|2CN8|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Debromohymenialdisine
pdb|2WTC|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2WTD|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2WTI|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2WTJ|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2XBJ|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2XM8|A Chain A, Co-Crystal Structure Of A Small Molecule Inhibitor Bound
To The Kinase Domain Of Chk2
pdb|2XM9|A Chain A, Structure Of A Small Molecule Inhibitor With The Kinase
Domain Of Chk2
pdb|4A9R|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
pdb|4A9S|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
pdb|4A9T|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
pdb|4A9U|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
Length = 329
Score = 47.8 bits (112), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 50/193 (25%), Positives = 87/193 (45%), Gaps = 22/193 (11%)
Query: 291 PKHLK----FGSKVASGSYGDL---YRGTYCSQDVAIKVLKPERINSDMQKE------FA 337
PK L+ + SG+ G++ + C + VAIK++ + +E
Sbjct: 11 PKALRDEYIMSKTLGSGACGEVKLAFERKTCKK-VAIKIISKRKFAIGSAREADPALNVE 69
Query: 338 QEVFIMRKVRHKNVVQFIGACTKPPSLCIVTEFMSGGSVYDYLHKLKGVFKLPSLLKVAI 397
E+ I++K+ H +++ I IV E M GG ++D + K + + L
Sbjct: 70 TEIEILKKLNHPCIIK-IKNFFDAEDYYIVLELMEGGELFDKVVGNKRLKEATCKLYF-Y 127
Query: 398 DVSKGMNYLHQNNIIHRDLKAANLLMDENEVSLLLSLCLFTVSILFCGKGRELISL---- 453
+ + YLH+N IIHRDLK N+L+ E L+ + F S + G+ + +L
Sbjct: 128 QMLLAVQYLHENGIIHRDLKPENVLLSSQEEDCLIKITDFGHSKIL-GETSLMRTLCGTP 186
Query: 454 -FLGNDVLLQFGT 465
+L +VL+ GT
Sbjct: 187 TYLAPEVLVSVGT 199
>pdb|1PME|A Chain A, Structure Of Penta Mutant Human Erk2 Map Kinase Complexed
With A Specific Inhibitor Of Human P38 Map Kinase
Length = 380
Score = 47.8 bits (112), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 43/170 (25%), Positives = 80/170 (47%), Gaps = 31/170 (18%)
Query: 286 VWEIDPKHLKFGSKVASGSYGDLYRGTYCSQ-------DVAIKVLKPERINSDMQKEFAQ 338
V+++ P++ S + G+YG CS VAIK + P + Q+ +
Sbjct: 38 VFDVGPRYTNL-SYIGEGAYG-----MVCSAYDNVNKVRVAIKKISPFEHQTYCQRTL-R 90
Query: 339 EVFIMRKVRHKNVVQFIGACTKPPSL------CIVTEFMSGGSVYDYLHKLKGVFKLPS- 391
E+ I+ + RH+N++ I + P++ +VT M L+KL L +
Sbjct: 91 EIKILLRFRHENIIG-INDIIRAPTIEQMKDVYLVTHLMGAD-----LYKLLKTQHLSND 144
Query: 392 -LLKVAIDVSKGMNYLHQNNIIHRDLKAANLLMDENEVSLLLSLCLFTVS 440
+ + +G+ Y+H N++HRDLK +NLL++ + L +C F ++
Sbjct: 145 HICYFLYQILRGLKYIHSANVLHRDLKPSNLLLN---TTXDLKICDFGLA 191
>pdb|1CMK|E Chain E, Crystal Structures Of The Myristylated Catalytic Subunit
Of Camp- Dependent Protein Kinase Reveal Open And Closed
Conformations
Length = 350
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 35/130 (26%), Positives = 64/130 (49%), Gaps = 4/130 (3%)
Query: 300 VASGSYGD--LYRGTYCSQDVAIKVLKPERINSDMQKEFA-QEVFIMRKVRHKNVVQFIG 356
+ +GS+G L + A+K+L +++ Q E E I++ V +V+
Sbjct: 49 LGTGSFGRVMLVKHKETGNHFAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEY 108
Query: 357 ACTKPPSLCIVTEFMSGGSVYDYLHKLKGVFKLPSLLKVAIDVSKGMNYLHQNNIIHRDL 416
+ +L +V E++ GG ++ +L ++ G F P A + YLH ++I+RDL
Sbjct: 109 SFKDNSNLYMVMEYVPGGEMFSHLRRI-GRFSEPHARFYAAQIVLTFEYLHSLDLIYRDL 167
Query: 417 KAANLLMDEN 426
K NLL+D+
Sbjct: 168 KPENLLIDQQ 177
>pdb|1CTP|E Chain E, Structure Of The Mammalian Catalytic Subunit Of
Camp-Dependent Protein Kinase And An Inhibitor Peptide
Displays An Open Conformation
Length = 350
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 35/130 (26%), Positives = 64/130 (49%), Gaps = 4/130 (3%)
Query: 300 VASGSYGD--LYRGTYCSQDVAIKVLKPERINSDMQKEFA-QEVFIMRKVRHKNVVQFIG 356
+ +GS+G L + A+K+L +++ Q E E I++ V +V+
Sbjct: 49 LGTGSFGRVMLVKHKETGNHFAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEY 108
Query: 357 ACTKPPSLCIVTEFMSGGSVYDYLHKLKGVFKLPSLLKVAIDVSKGMNYLHQNNIIHRDL 416
+ +L +V E++ GG ++ +L ++ G F P A + YLH ++I+RDL
Sbjct: 109 SFKDNSNLYMVMEYVPGGEMFSHLRRI-GRFSEPHARFYAAQIVLTFEYLHSLDLIYRDL 167
Query: 417 KAANLLMDEN 426
K NLL+D+
Sbjct: 168 KPENLLIDQQ 177
>pdb|1CDK|A Chain A, Camp-Dependent Protein Kinase Catalytic Subunit
(E.C.2.7.1.37) (Protein Kinase A) Complexed With Protein
Kinase Inhibitor Peptide Fragment 5-24 (Pki(5-24)
Isoelectric Variant Ca) And Mn2+ Adenylyl
Imidodiphosphate (Mnamp-Pnp) At Ph 5.6 And 7c And 4c
pdb|1CDK|B Chain B, Camp-Dependent Protein Kinase Catalytic Subunit
(E.C.2.7.1.37) (Protein Kinase A) Complexed With Protein
Kinase Inhibitor Peptide Fragment 5-24 (Pki(5-24)
Isoelectric Variant Ca) And Mn2+ Adenylyl
Imidodiphosphate (Mnamp-Pnp) At Ph 5.6 And 7c And 4c
Length = 350
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 35/130 (26%), Positives = 64/130 (49%), Gaps = 4/130 (3%)
Query: 300 VASGSYGD--LYRGTYCSQDVAIKVLKPERINSDMQKEFA-QEVFIMRKVRHKNVVQFIG 356
+ +GS+G L + A+K+L +++ Q E E I++ V +V+
Sbjct: 49 LGTGSFGRVMLVKHKETGNHFAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEY 108
Query: 357 ACTKPPSLCIVTEFMSGGSVYDYLHKLKGVFKLPSLLKVAIDVSKGMNYLHQNNIIHRDL 416
+ +L +V E++ GG ++ +L ++ G F P A + YLH ++I+RDL
Sbjct: 109 SFKDNSNLYMVMEYVPGGEMFSHLRRI-GRFSEPHARFYAAQIVLTFEYLHSLDLIYRDL 167
Query: 417 KAANLLMDEN 426
K NLL+D+
Sbjct: 168 KPENLLIDQQ 177
>pdb|1SVH|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 8
pdb|1XH5|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|1XH6|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|1XH8|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|2GFC|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
Length = 350
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 35/130 (26%), Positives = 64/130 (49%), Gaps = 4/130 (3%)
Query: 300 VASGSYGD--LYRGTYCSQDVAIKVLKPERINSDMQKEFA-QEVFIMRKVRHKNVVQFIG 356
+ +GS+G L + A+K+L +++ Q E E I++ V +V+
Sbjct: 49 LGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEF 108
Query: 357 ACTKPPSLCIVTEFMSGGSVYDYLHKLKGVFKLPSLLKVAIDVSKGMNYLHQNNIIHRDL 416
+ +L +V E++ GG ++ +L ++ G F P A + YLH ++I+RDL
Sbjct: 109 SFKDNSNLYMVMEYVPGGEMFSHLRRI-GRFSEPHARFYAAQIVLTFEYLHSLDLIYRDL 167
Query: 417 KAANLLMDEN 426
K NLL+D+
Sbjct: 168 KPENLLIDQQ 177
>pdb|2UZT|A Chain A, Pka Structures Of Akt, Indazole-Pyridine Inhibitors
pdb|2UZU|E Chain E, Pka Structures Of Indazole-Pyridine Series Of Akt
Inhibitors
pdb|2UZV|A Chain A, Pka Structures Of Indazole-pyridine Series Of Akt
Inhibitors
pdb|2UZW|E Chain E, Pka Structures Of Indazole-Pyridine Series Of Akt
Inhibitors
Length = 336
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 35/130 (26%), Positives = 64/130 (49%), Gaps = 4/130 (3%)
Query: 300 VASGSYGD--LYRGTYCSQDVAIKVLKPERINSDMQKEFA-QEVFIMRKVRHKNVVQFIG 356
+ +GS+G L + A+K+L +++ Q E E I++ V +V+
Sbjct: 35 LGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEF 94
Query: 357 ACTKPPSLCIVTEFMSGGSVYDYLHKLKGVFKLPSLLKVAIDVSKGMNYLHQNNIIHRDL 416
+ +L +V E++ GG ++ +L ++ G F P A + YLH ++I+RDL
Sbjct: 95 SFKDNSNLYMVMEYVPGGEMFSHLRRI-GRFSEPHARFYAAQIVLTFEYLHSLDLIYRDL 153
Query: 417 KAANLLMDEN 426
K NLL+D+
Sbjct: 154 KPENLLIDQQ 163
>pdb|2F7E|E Chain E, Pka Complexed With
(S)-2-(1h-Indol-3-Yl)-1-(5-Isoquinolin-6-
Yl-Pyridin-3-Yloxymethyl-Etylamine
pdb|2F7X|E Chain E, Protein Kinase A Bound To
(s)-2-(1h-indol-3-yl)-1-[5-((e)-2-
Pyridin-4-yl-vinyl)-pyridin-3-yloxymethyl]-ethylamine
pdb|2F7Z|E Chain E, Protein Kinase A Bound To
(R)-1-(1h-Indol-3-Ylmethyl)-2-(2-
Pyridin-4-Yl-[1,7]naphtyridin-5-Yloxy)-Ehylamine
pdb|2OH0|E Chain E, Crystal Structure Of Protein Kinase A In Complex With
Pyridine-Pyrazolopyridine Based Inhibitors
pdb|2OJF|E Chain E, Crystal Structure Of Protein Kinase A In Complex With
Pyridine-Pyrazolopyridine Based Inhibitors
Length = 351
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 35/130 (26%), Positives = 64/130 (49%), Gaps = 4/130 (3%)
Query: 300 VASGSYGD--LYRGTYCSQDVAIKVLKPERINSDMQKEFA-QEVFIMRKVRHKNVVQFIG 356
+ +GS+G L + A+K+L +++ Q E E I++ V +V+
Sbjct: 50 LGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEF 109
Query: 357 ACTKPPSLCIVTEFMSGGSVYDYLHKLKGVFKLPSLLKVAIDVSKGMNYLHQNNIIHRDL 416
+ +L +V E++ GG ++ +L ++ G F P A + YLH ++I+RDL
Sbjct: 110 SFKDNSNLYMVMEYVPGGEMFSHLRRI-GRFSEPHARFYAAQIVLTFEYLHSLDLIYRDL 168
Query: 417 KAANLLMDEN 426
K NLL+D+
Sbjct: 169 KPENLLIDQQ 178
>pdb|1STC|E Chain E, Camp-Dependent Protein Kinase, Alpha-Catalytic Subunit In
Complex With Staurosporine
pdb|1Q8T|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase
(Pka) In Complex With Rho-Kinase Inhibitor Y-27632
pdb|1Q8U|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase In
Complex With Rho-Kinase Inhibitor H-1152p
pdb|1SVE|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 1
pdb|1SVG|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 4
pdb|1VEB|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 5
pdb|3E8C|A Chain A, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|B Chain B, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|C Chain C, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|D Chain D, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|E Chain E, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|F Chain F, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8E|A Chain A, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|B Chain B, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|E Chain E, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|I Chain I, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|L Chain L, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|P Chain P, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
Length = 350
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 35/130 (26%), Positives = 64/130 (49%), Gaps = 4/130 (3%)
Query: 300 VASGSYGD--LYRGTYCSQDVAIKVLKPERINSDMQKEFA-QEVFIMRKVRHKNVVQFIG 356
+ +GS+G L + A+K+L +++ Q E E I++ V +V+
Sbjct: 49 LGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEF 108
Query: 357 ACTKPPSLCIVTEFMSGGSVYDYLHKLKGVFKLPSLLKVAIDVSKGMNYLHQNNIIHRDL 416
+ +L +V E++ GG ++ +L ++ G F P A + YLH ++I+RDL
Sbjct: 109 SFKDNSNLYMVMEYVPGGEMFSHLRRI-GRFSEPHARFYAAQIVLTFEYLHSLDLIYRDL 167
Query: 417 KAANLLMDEN 426
K NLL+D+
Sbjct: 168 KPENLLIDQQ 177
>pdb|2C1A|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
Isoquinoline-5-Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl)amide
pdb|2C1B|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
(4r,2s)-5'-(4-(4-Chlorobenzyloxy)pyrrolidin-2-
Ylmethanesulfonyl)isoquinoline
pdb|2VO7|A Chain A, Structure Of Pka Complexed With 4-(4-Chlorobenzyl)-1-(7h-
Pyrrolo(2,3-D)pyrimidin-4-Yl)piperidin-4-Ylamine
pdb|3AG9|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1012
pdb|3AG9|B Chain B, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1012
Length = 351
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 35/130 (26%), Positives = 64/130 (49%), Gaps = 4/130 (3%)
Query: 300 VASGSYGD--LYRGTYCSQDVAIKVLKPERINSDMQKEFA-QEVFIMRKVRHKNVVQFIG 356
+ +GS+G L + A+K+L +++ Q E E I++ V +V+
Sbjct: 50 LGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEF 109
Query: 357 ACTKPPSLCIVTEFMSGGSVYDYLHKLKGVFKLPSLLKVAIDVSKGMNYLHQNNIIHRDL 416
+ +L +V E++ GG ++ +L ++ G F P A + YLH ++I+RDL
Sbjct: 110 SFKDNSNLYMVMEYVPGGEMFSHLRRI-GRFSEPHARFYAAQIVLTFEYLHSLDLIYRDL 168
Query: 417 KAANLLMDEN 426
K NLL+D+
Sbjct: 169 KPENLLIDQQ 178
>pdb|1Q8W|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase In
Complex With Rho-Kinase Inhibitor Fasudil (Ha-1077)
pdb|1XH4|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|3BWJ|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Lead Compound Arc-1034
pdb|3KKV|A Chain A, Structure Of Pka With A Protein Kinase B-Selective
Inhibitor
Length = 350
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 35/130 (26%), Positives = 64/130 (49%), Gaps = 4/130 (3%)
Query: 300 VASGSYGD--LYRGTYCSQDVAIKVLKPERINSDMQKEFA-QEVFIMRKVRHKNVVQFIG 356
+ +GS+G L + A+K+L +++ Q E E I++ V +V+
Sbjct: 49 LGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEF 108
Query: 357 ACTKPPSLCIVTEFMSGGSVYDYLHKLKGVFKLPSLLKVAIDVSKGMNYLHQNNIIHRDL 416
+ +L +V E++ GG ++ +L ++ G F P A + YLH ++I+RDL
Sbjct: 109 SFKDNSNLYMVMEYVPGGEMFSHLRRI-GRFXEPHARFYAAQIVLTFEYLHSLDLIYRDL 167
Query: 417 KAANLLMDEN 426
K NLL+D+
Sbjct: 168 KPENLLIDQQ 177
>pdb|4AE9|A Chain A, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit C Alpha 2
pdb|4AE9|B Chain B, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit C Alpha 2
Length = 343
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 35/130 (26%), Positives = 64/130 (49%), Gaps = 4/130 (3%)
Query: 300 VASGSYGD--LYRGTYCSQDVAIKVLKPERINSDMQKEFA-QEVFIMRKVRHKNVVQFIG 356
+ +GS+G L + A+K+L +++ Q E E I++ V +V+
Sbjct: 42 LGTGSFGRVMLVKHKETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEF 101
Query: 357 ACTKPPSLCIVTEFMSGGSVYDYLHKLKGVFKLPSLLKVAIDVSKGMNYLHQNNIIHRDL 416
+ +L +V E++ GG ++ +L ++ G F P A + YLH ++I+RDL
Sbjct: 102 SFKDNSNLYMVMEYVPGGEMFSHLRRI-GRFXEPHARFYAAQIVLTFEYLHSLDLIYRDL 160
Query: 417 KAANLLMDEN 426
K NLL+D+
Sbjct: 161 KPENLLIDQQ 170
>pdb|4AE6|A Chain A, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit Calpha 2
pdb|4AE6|B Chain B, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit Calpha 2
Length = 343
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 35/130 (26%), Positives = 64/130 (49%), Gaps = 4/130 (3%)
Query: 300 VASGSYGD--LYRGTYCSQDVAIKVLKPERINSDMQKEFA-QEVFIMRKVRHKNVVQFIG 356
+ +GS+G L + A+K+L +++ Q E E I++ V +V+
Sbjct: 42 LGTGSFGRVMLVKHKETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEF 101
Query: 357 ACTKPPSLCIVTEFMSGGSVYDYLHKLKGVFKLPSLLKVAIDVSKGMNYLHQNNIIHRDL 416
+ +L +V E++ GG ++ +L ++ G F P A + YLH ++I+RDL
Sbjct: 102 SFKDNSNLYMVMEYVPGGEMFSHLRRI-GRFSEPHARFYAAQIVLTFEYLHSLDLIYRDL 160
Query: 417 KAANLLMDEN 426
K NLL+D+
Sbjct: 161 KPENLLIDQQ 170
>pdb|3NX8|A Chain A, Human Camp Dependent Protein Kinase In Complex With Phenol
Length = 351
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 35/130 (26%), Positives = 64/130 (49%), Gaps = 4/130 (3%)
Query: 300 VASGSYGD--LYRGTYCSQDVAIKVLKPERINSDMQKEFA-QEVFIMRKVRHKNVVQFIG 356
+ +GS+G L + A+K+L +++ Q E E I++ V +V+
Sbjct: 50 LGTGSFGRVMLVKHKETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEF 109
Query: 357 ACTKPPSLCIVTEFMSGGSVYDYLHKLKGVFKLPSLLKVAIDVSKGMNYLHQNNIIHRDL 416
+ +L +V E++ GG ++ +L ++ G F P A + YLH ++I+RDL
Sbjct: 110 SFKDNSNLYMVMEYVPGGEMFSHLRRI-GRFSEPHARFYAAQIVLTFEYLHSLDLIYRDL 168
Query: 417 KAANLLMDEN 426
K NLL+D+
Sbjct: 169 KPENLLIDQQ 178
>pdb|3AGM|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-670
pdb|3L9L|A Chain A, Crystal Structure Of Pka With Compound 36
pdb|3L9L|B Chain B, Crystal Structure Of Pka With Compound 36
pdb|3OOG|A Chain A, Human Camp-Dependent Protein Kinase In Complex With A
Small Fragment
pdb|3OVV|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3OWP|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3OXT|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3P0M|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3POO|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
Length = 351
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 35/130 (26%), Positives = 64/130 (49%), Gaps = 4/130 (3%)
Query: 300 VASGSYGD--LYRGTYCSQDVAIKVLKPERINSDMQKEFA-QEVFIMRKVRHKNVVQFIG 356
+ +GS+G L + A+K+L +++ Q E E I++ V +V+
Sbjct: 50 LGTGSFGRVMLVKHKETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEF 109
Query: 357 ACTKPPSLCIVTEFMSGGSVYDYLHKLKGVFKLPSLLKVAIDVSKGMNYLHQNNIIHRDL 416
+ +L +V E++ GG ++ +L ++ G F P A + YLH ++I+RDL
Sbjct: 110 SFKDNSNLYMVMEYVPGGEMFSHLRRI-GRFSEPHARFYAAQIVLTFEYLHSLDLIYRDL 168
Query: 417 KAANLLMDEN 426
K NLL+D+
Sbjct: 169 KPENLLIDQQ 178
>pdb|3DND|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
pdb|3DNE|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
Length = 350
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 35/130 (26%), Positives = 64/130 (49%), Gaps = 4/130 (3%)
Query: 300 VASGSYGD--LYRGTYCSQDVAIKVLKPERINSDMQKEFA-QEVFIMRKVRHKNVVQFIG 356
+ +GS+G L + A+K+L +++ Q E E I++ V +V+
Sbjct: 49 LGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEF 108
Query: 357 ACTKPPSLCIVTEFMSGGSVYDYLHKLKGVFKLPSLLKVAIDVSKGMNYLHQNNIIHRDL 416
+ +L +V E++ GG ++ +L ++ G F P A + YLH ++I+RDL
Sbjct: 109 SFKDNSNLYMVMEYVPGGEMFSHLRRI-GRFSEPHARFYAAQIVLTFEYLHSLDLIYRDL 167
Query: 417 KAANLLMDEN 426
K NLL+D+
Sbjct: 168 KPENLLIDQQ 177
>pdb|3MVJ|A Chain A, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
pdb|3MVJ|B Chain B, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
pdb|3MVJ|E Chain E, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
Length = 371
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 35/130 (26%), Positives = 64/130 (49%), Gaps = 4/130 (3%)
Query: 300 VASGSYGD--LYRGTYCSQDVAIKVLKPERINSDMQKEFA-QEVFIMRKVRHKNVVQFIG 356
+ +GS+G L + A+K+L +++ Q E E I++ V +V+
Sbjct: 70 LGTGSFGRVMLVKHKETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEF 129
Query: 357 ACTKPPSLCIVTEFMSGGSVYDYLHKLKGVFKLPSLLKVAIDVSKGMNYLHQNNIIHRDL 416
+ +L +V E++ GG ++ +L ++ G F P A + YLH ++I+RDL
Sbjct: 130 SFKDNSNLYMVMEYVPGGEMFSHLRRI-GRFSEPHARFYAAQIVLTFEYLHSLDLIYRDL 188
Query: 417 KAANLLMDEN 426
K NLL+D+
Sbjct: 189 KPENLLIDQQ 198
>pdb|3AGL|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1039
pdb|3AGL|B Chain B, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1039
pdb|3VQH|A Chain A, Bromine Sad Partially Resolves Multiple Binding Modes For
Pka Inhibitor H-89
Length = 351
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 35/130 (26%), Positives = 64/130 (49%), Gaps = 4/130 (3%)
Query: 300 VASGSYGD--LYRGTYCSQDVAIKVLKPERINSDMQKEFA-QEVFIMRKVRHKNVVQFIG 356
+ +GS+G L + A+K+L +++ Q E E I++ V +V+
Sbjct: 50 LGTGSFGRVMLVKHKETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEF 109
Query: 357 ACTKPPSLCIVTEFMSGGSVYDYLHKLKGVFKLPSLLKVAIDVSKGMNYLHQNNIIHRDL 416
+ +L +V E++ GG ++ +L ++ G F P A + YLH ++I+RDL
Sbjct: 110 SFKDNSNLYMVMEYVPGGEMFSHLRRI-GRFSEPHARFYAAQIVLTFEYLHSLDLIYRDL 168
Query: 417 KAANLLMDEN 426
K NLL+D+
Sbjct: 169 KPENLLIDQQ 178
>pdb|2JDS|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
A- 443654
Length = 351
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 35/130 (26%), Positives = 64/130 (49%), Gaps = 4/130 (3%)
Query: 300 VASGSYGD--LYRGTYCSQDVAIKVLKPERINSDMQKEFA-QEVFIMRKVRHKNVVQFIG 356
+ +GS+G L + A+K+L +++ Q E E I++ V +V+
Sbjct: 50 LGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEF 109
Query: 357 ACTKPPSLCIVTEFMSGGSVYDYLHKLKGVFKLPSLLKVAIDVSKGMNYLHQNNIIHRDL 416
+ +L +V E++ GG ++ +L ++ G F P A + YLH ++I+RDL
Sbjct: 110 SFKDNSNLYMVMEYVPGGEMFSHLRRI-GRFXEPHARFYAAQIVLTFEYLHSLDLIYRDL 168
Query: 417 KAANLLMDEN 426
K NLL+D+
Sbjct: 169 KPENLLIDQQ 178
>pdb|1XH7|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 35/130 (26%), Positives = 64/130 (49%), Gaps = 4/130 (3%)
Query: 300 VASGSYGD--LYRGTYCSQDVAIKVLKPERINSDMQKEFA-QEVFIMRKVRHKNVVQFIG 356
+ +GS+G L + A+K+L +++ Q E E I++ V +V+
Sbjct: 49 LGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEF 108
Query: 357 ACTKPPSLCIVTEFMSGGSVYDYLHKLKGVFKLPSLLKVAIDVSKGMNYLHQNNIIHRDL 416
+ +L +V E++ GG ++ +L ++ G F P A + YLH ++I+RDL
Sbjct: 109 SFKDNSNLYMVMEYVPGGEMFSHLRRI-GRFXEPHARFYAAQIVLTFEYLHSLDLIYRDL 167
Query: 417 KAANLLMDEN 426
K NLL+D+
Sbjct: 168 KPENLLIDQQ 177
>pdb|3K2L|A Chain A, Crystal Structure Of Dual-Specificity Tyrosine
Phosphorylation Regulated Kinase 2 (Dyrk2)
Length = 429
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 37/139 (26%), Positives = 71/139 (51%), Gaps = 13/139 (9%)
Query: 300 VASGSYGDLYRGT--YCSQDVAIKVLKPERINSDMQKEFAQEVFIMRKVRHK------NV 351
+ G +G + + Q VA+K+++ E+ ++ A+E+ I+ +R + NV
Sbjct: 105 IGKGXFGQVVKAYDHKVHQHVALKMVRNEK---RFHRQAAEEIRILEHLRKQDKDNTMNV 161
Query: 352 VQFIGACTKPPSLCIVTEFMSGGSVYDYLHKLK-GVFKLPSLLKVAIDVSKGMNYLHQNN 410
+ + T +C+ E +S ++Y+ + K K F LP + K A + + ++ LH+N
Sbjct: 162 IHMLENFTFRNHICMTFELLSM-NLYELIKKNKFQGFSLPLVRKFAHSILQCLDALHKNR 220
Query: 411 IIHRDLKAANLLMDENEVS 429
IIH DLK N+L+ + S
Sbjct: 221 IIHCDLKPENILLKQQGRS 239
>pdb|3I6U|A Chain A, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6U|B Chain B, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
Length = 419
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 49/193 (25%), Positives = 87/193 (45%), Gaps = 22/193 (11%)
Query: 291 PKHLK----FGSKVASGSYGDL---YRGTYCSQDVAIKVLKPERINSDMQKE------FA 337
PK L+ + SG+ G++ + C + VAI+++ + +E
Sbjct: 130 PKALRDEYIMSKTLGSGACGEVKLAFERKTCKK-VAIRIISKRKFAIGSAREADPALNVE 188
Query: 338 QEVFIMRKVRHKNVVQFIGACTKPPSLCIVTEFMSGGSVYDYLHKLKGVFKLPSLLKVAI 397
E+ I++K+ H +++ I IV E M GG ++D + K + + L
Sbjct: 189 TEIEILKKLNHPCIIK-IKNFFDAEDYYIVLELMEGGELFDKVVGNKRLKEATCKLYF-Y 246
Query: 398 DVSKGMNYLHQNNIIHRDLKAANLLMDENEVSLLLSLCLFTVSILFCGKGRELISL---- 453
+ + YLH+N IIHRDLK N+L+ E L+ + F S + G+ + +L
Sbjct: 247 QMLLAVQYLHENGIIHRDLKPENVLLSSQEEDCLIKITDFGHSKIL-GETSLMRTLCGTP 305
Query: 454 -FLGNDVLLQFGT 465
+L +VL+ GT
Sbjct: 306 TYLAPEVLVSVGT 318
>pdb|3O7L|B Chain B, Crystal Structure Of Phospholamban (1-19):pka
C-Subunit:amp-Pnp:mg2+ Complex
Length = 350
Score = 47.0 bits (110), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 34/130 (26%), Positives = 65/130 (50%), Gaps = 4/130 (3%)
Query: 300 VASGSYGD--LYRGTYCSQDVAIKVLKPERINSDMQKEFA-QEVFIMRKVRHKNVVQFIG 356
+ +GS+G L + A+K+L +++ Q E E I++ V +V+
Sbjct: 49 LGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEF 108
Query: 357 ACTKPPSLCIVTEFMSGGSVYDYLHKLKGVFKLPSLLKVAIDVSKGMNYLHQNNIIHRDL 416
+ +L +V E+++GG ++ +L ++ G F P A + YLH ++I+RDL
Sbjct: 109 SFKDNSNLYMVMEYVAGGEMFSHLRRI-GRFSEPHARFYAAQIVLTFEYLHSLDLIYRDL 167
Query: 417 KAANLLMDEN 426
K NL++D+
Sbjct: 168 KPENLIIDQQ 177
>pdb|1ZY4|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant In Apo Form.
pdb|1ZY4|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant In Apo Form.
pdb|1ZY5|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant Complexed With Amppnp.
pdb|1ZY5|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant Complexed With Amppnp
Length = 303
Score = 47.0 bits (110), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 31/140 (22%), Positives = 62/140 (44%), Gaps = 14/140 (10%)
Query: 300 VASGSYGDLYRGTYCSQDVAIKVLKPERINSDMQKEFAQEVFIMRKVRHKNVVQF----- 354
+ G++G + + + D +K R + EV ++ + H+ VV++
Sbjct: 14 LGQGAFGQVVKAR-NALDSRYYAIKKIRHTEEKLSTILSEVMLLASLNHQYVVRYYAAWL 72
Query: 355 --------IGACTKPPSLCIVTEFMSGGSVYDYLHKLKGVFKLPSLLKVAIDVSKGMNYL 406
+ A K +L I E+ G++YD +H + ++ + + ++Y+
Sbjct: 73 ERRNFVKPMTAVKKKSTLFIQMEYCENGTLYDLIHSENLNQQRDEYWRLFRQILEALSYI 132
Query: 407 HQNNIIHRDLKAANLLMDEN 426
H IIHRDLK N+ +DE+
Sbjct: 133 HSQGIIHRDLKPMNIFIDES 152
>pdb|1OIR|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-Dependent Kinase Inhibitors Identified Through
Structure-Based Hybridisation
Length = 299
Score = 47.0 bits (110), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 30/129 (23%), Positives = 63/129 (48%), Gaps = 4/129 (3%)
Query: 299 KVASGSYGDLY--RGTYCSQDVAIKVLKPERINSDMQKEFAQEVFIMRKVRHKNVVQFIG 356
K+ G+YG +Y R + VA+ ++ + + +E+ +++++ H N+V+ +
Sbjct: 10 KIGEGTYGVVYKARNKLTGEVVALXKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLD 69
Query: 357 ACTKPPSLCIVTEFMSGG-SVYDYLHKLKGVFKLPSLLKVAIDVSKGMNYLHQNNIIHRD 415
L +V EF+ + L G+ LP + + +G+ + H + ++HRD
Sbjct: 70 VIHTENKLYLVFEFLHQDLKKFMDASALTGI-PLPLIKSYLFQLLQGLAFCHSHRVLHRD 128
Query: 416 LKAANLLMD 424
LK NLL++
Sbjct: 129 LKPQNLLIN 137
>pdb|1H01|A Chain A, Cdk2 In Complex With A Disubstituted 2, 4-Bis Anilino
Pyrimidine Cdk4 Inhibitor
Length = 298
Score = 47.0 bits (110), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 30/129 (23%), Positives = 63/129 (48%), Gaps = 4/129 (3%)
Query: 299 KVASGSYGDLY--RGTYCSQDVAIKVLKPERINSDMQKEFAQEVFIMRKVRHKNVVQFIG 356
K+ G+YG +Y R + VA+ ++ + + +E+ +++++ H N+V+ +
Sbjct: 9 KIGEGTYGVVYKARNKLTGEVVALXKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLD 68
Query: 357 ACTKPPSLCIVTEFMSGG-SVYDYLHKLKGVFKLPSLLKVAIDVSKGMNYLHQNNIIHRD 415
L +V EF+ + L G+ LP + + +G+ + H + ++HRD
Sbjct: 69 VIHTENKLYLVFEFLHQDLKKFMDASALTGI-PLPLIKSYLFQLLQGLAFCHSHRVLHRD 127
Query: 416 LKAANLLMD 424
LK NLL++
Sbjct: 128 LKPQNLLIN 136
>pdb|3MFR|A Chain A, Cask-4m Cam Kinase Domain, Native
pdb|3MFS|A Chain A, Cask-4m Cam Kinase Domain, Amppnp
pdb|3MFT|A Chain A, Cask-4m Cam Kinase Domain, Mn2+
pdb|3MFU|A Chain A, Cask-4m Cam Kinase Domain, Amppnp-Mn2+
Length = 351
Score = 47.0 bits (110), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 33/133 (24%), Positives = 62/133 (46%), Gaps = 6/133 (4%)
Query: 315 SQDVAIKVLKPERINSD---MQKEFAQEVFIMRKVRHKNVVQFIGACTKPPSLCIVTEFM 371
Q A+K++ + S ++ +E I ++H ++V+ + + L +V EFM
Sbjct: 49 GQQFAVKIVDVAKFTSSPGLSTEDLKREASICHMLKHPHIVELLETYSSDGMLYMVFEFM 108
Query: 372 SGGSV-YDYLHKLKGVFKLPSLLK--VAIDVSKGMNYLHQNNIIHRDLKAANLLMDENEV 428
G + ++ + + F + + + + Y H NNIIHRD+K N+L+ E
Sbjct: 109 DGADLCFEIVKRADAGFVYSEAVASHYMRQILEALRYCHDNNIIHRDVKPENVLLASKEN 168
Query: 429 SLLLSLCLFTVSI 441
S + L F V+I
Sbjct: 169 SAPVKLGDFGVAI 181
>pdb|3I6W|A Chain A, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|B Chain B, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|C Chain C, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|D Chain D, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|E Chain E, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|F Chain F, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|G Chain G, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|H Chain H, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
Length = 443
Score = 47.0 bits (110), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 49/193 (25%), Positives = 87/193 (45%), Gaps = 22/193 (11%)
Query: 291 PKHLK----FGSKVASGSYGDL---YRGTYCSQDVAIKVLKPERINSDMQKE------FA 337
PK L+ + SG+ G++ + C + VAI+++ + +E
Sbjct: 144 PKALRDEYIMSKTLGSGACGEVKLAFERKTCKK-VAIRIISKRKFAIGSAREADPALNVE 202
Query: 338 QEVFIMRKVRHKNVVQFIGACTKPPSLCIVTEFMSGGSVYDYLHKLKGVFKLPSLLKVAI 397
E+ I++K+ H +++ I IV E M GG ++D + K + + L
Sbjct: 203 TEIEILKKLNHPCIIK-IKNFFDAEDYYIVLELMEGGELFDKVVGNKRLKEATCKLYF-Y 260
Query: 398 DVSKGMNYLHQNNIIHRDLKAANLLMDENEVSLLLSLCLFTVSILFCGKGRELISL---- 453
+ + YLH+N IIHRDLK N+L+ E L+ + F S + G+ + +L
Sbjct: 261 QMLLAVQYLHENGIIHRDLKPENVLLSSQEEDCLIKITDFGHSKIL-GETSLMRTLCGTP 319
Query: 454 -FLGNDVLLQFGT 465
+L +VL+ GT
Sbjct: 320 TYLAPEVLVSVGT 332
>pdb|2JED|A Chain A, The Crystal Structure Of The Kinase Domain Of The Protein
Kinase C Theta In Complex With Nvp-Xaa228 At 2.32a
Resolution.
pdb|2JED|B Chain B, The Crystal Structure Of The Kinase Domain Of The Protein
Kinase C Theta In Complex With Nvp-Xaa228 At 2.32a
Resolution
Length = 352
Score = 47.0 bits (110), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 30/131 (22%), Positives = 62/131 (47%), Gaps = 5/131 (3%)
Query: 300 VASGSYGDLYRGTY--CSQDVAIKVLKPERI--NSDMQKEFAQEVFIMRKVRHKNVVQFI 355
+ GS+G ++ + +Q AIK LK + + + D++ ++ + H +
Sbjct: 26 LGKGSFGKVFLAEFKKTNQFFAIKALKKDVVLMDDDVECTMVEKRVLSLAWEHPFLTHMF 85
Query: 356 GACTKPPSLCIVTEFMSGGSVYDYLHKLKGVFKLPSLLKVAIDVSKGMNYLHQNNIIHRD 415
+L V E+++GG + ++ F L A ++ G+ +LH I++RD
Sbjct: 86 CTFQTKENLFFVMEYLNGGDLMYHIQSCHK-FDLSRATFYAAEIILGLQFLHSKGIVYRD 144
Query: 416 LKAANLLMDEN 426
LK N+L+D++
Sbjct: 145 LKLDNILLDKD 155
>pdb|3IW4|A Chain A, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
pdb|3IW4|B Chain B, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
pdb|3IW4|C Chain C, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
Length = 360
Score = 47.0 bits (110), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 34/131 (25%), Positives = 68/131 (51%), Gaps = 9/131 (6%)
Query: 300 VASGSYGDLY----RGTYCSQDVAIKVLKPERI--NSDMQKEFAQEVFIMRKVRHKNVVQ 353
+ GS+G + +GT + AIK+LK + + + D++ ++ + + + Q
Sbjct: 27 LGKGSFGKVMLADRKGT--EELYAIKILKKDVVIQDDDVECTMVEKRVLALLDKPPFLTQ 84
Query: 354 FIGACTKPPSLCIVTEFMSGGSVYDYLHKLKGVFKLPSLLKVAIDVSKGMNYLHQNNIIH 413
L V E+++GG + ++ ++ G FK P + A ++S G+ +LH+ II+
Sbjct: 85 LHSCFQTVDRLYFVMEYVNGGDLMYHIQQV-GKFKEPQAVFYAAEISIGLFFLHKRGIIY 143
Query: 414 RDLKAANLLMD 424
RDLK N+++D
Sbjct: 144 RDLKLDNVMLD 154
>pdb|1GII|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|1GIJ|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|2DS1|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
Length = 298
Score = 47.0 bits (110), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 32/136 (23%), Positives = 64/136 (47%), Gaps = 18/136 (13%)
Query: 299 KVASGSYGDLY--RGTYCSQDVAIKVLKPERINSDMQKEFAQEVFIMRKVRHKNVVQFIG 356
K+ G+YG +Y R + VA+K ++ + + +E+ +++++ H N+V+ +
Sbjct: 9 KIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLD 68
Query: 357 ACTKPPSLCIVTE--------FMSGGSVYDYLHKLKGVFKLPSLLKVAIDVSKGMNYLHQ 408
L +V E FM + L G+ LP + + +G+ + H
Sbjct: 69 VIHTENKLYLVFEHVHQDLKTFMDASA-------LTGI-PLPLIKSYLFQLLQGLAFCHS 120
Query: 409 NNIIHRDLKAANLLMD 424
+ ++HRDLK NLL++
Sbjct: 121 HRVLHRDLKPQNLLIN 136
>pdb|1XJD|A Chain A, Crystal Structure Of Pkc-Theta Complexed With
Staurosporine At 2a Resolution
Length = 345
Score = 47.0 bits (110), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 30/131 (22%), Positives = 62/131 (47%), Gaps = 5/131 (3%)
Query: 300 VASGSYGDLYRGTY--CSQDVAIKVLKPERI--NSDMQKEFAQEVFIMRKVRHKNVVQFI 355
+ GS+G ++ + +Q AIK LK + + + D++ ++ + H +
Sbjct: 25 LGKGSFGKVFLAEFKKTNQFFAIKALKKDVVLMDDDVECTMVEKRVLSLAWEHPFLTHMF 84
Query: 356 GACTKPPSLCIVTEFMSGGSVYDYLHKLKGVFKLPSLLKVAIDVSKGMNYLHQNNIIHRD 415
+L V E+++GG + ++ F L A ++ G+ +LH I++RD
Sbjct: 85 CTFQTKENLFFVMEYLNGGDLMYHIQSCHK-FDLSRATFYAAEIILGLQFLHSKGIVYRD 143
Query: 416 LKAANLLMDEN 426
LK N+L+D++
Sbjct: 144 LKLDNILLDKD 154
>pdb|2ACX|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 6
Bound To Amppnp
pdb|2ACX|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 6
Bound To Amppnp
Length = 576
Score = 46.6 bits (109), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 26/86 (30%), Positives = 45/86 (52%), Gaps = 1/86 (1%)
Query: 342 IMRKVRHKNVVQFIGACTKPPSLCIVTEFMSGGSV-YDYLHKLKGVFKLPSLLKVAIDVS 400
I+ KV + VV A +LC+V M+GG + + H + F + A ++
Sbjct: 237 ILEKVNSRFVVSLAYAYETKDALCLVLTLMNGGDLKFHIYHMGQAGFPEARAVFYAAEIC 296
Query: 401 KGMNYLHQNNIIHRDLKAANLLMDEN 426
G+ LH+ I++RDLK N+L+D++
Sbjct: 297 CGLEDLHRERIVYRDLKPENILLDDH 322
>pdb|4GSB|A Chain A, Monoclinic Crystal Form Of The Apo-Erk2
Length = 364
Score = 46.6 bits (109), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 43/170 (25%), Positives = 80/170 (47%), Gaps = 31/170 (18%)
Query: 286 VWEIDPKHLKFGSKVASGSYGDLYRGTYCSQ-------DVAIKVLKPERINSDMQKEFAQ 338
V+++ P++ S + G+YG CS VAIK + P + Q+ +
Sbjct: 22 VFDVGPRYTNL-SYIGEGAYG-----MVCSAYDNLNKVRVAIKKISPFEHQTYXQRTL-R 74
Query: 339 EVFIMRKVRHKNVVQFIGACTKPPSL------CIVTEFMSGGSVYDYLHKLKGVFKLPS- 391
E+ I+ + RH+N++ I + P++ IV + M L+KL L +
Sbjct: 75 EIKILLRFRHENIIG-INDIIRAPTIEQMKDVYIVQDLMETD-----LYKLLKTQHLSND 128
Query: 392 -LLKVAIDVSKGMNYLHQNNIIHRDLKAANLLMDENEVSLLLSLCLFTVS 440
+ + +G+ Y+H N++HRDLK +NLL++ + L +C F ++
Sbjct: 129 HICYFLYQILRGLKYIHSANVLHRDLKPSNLLLN---TTXDLKICDFGLA 175
>pdb|1IG1|A Chain A, 1.8a X-Ray Structure Of Ternary Complex Of A Catalytic
Domain Of Death-Associated Protein Kinase With Atp
Analogue And Mn.
pdb|1JKL|A Chain A, 1.6a X-Ray Structure Of Binary Complex Of A Catalytic
Domain Of Death-Associated Protein Kinase With Atp
Analogue
pdb|1JKS|A Chain A, 1.5a X-Ray Structure Of Apo Form Of A Catalytic Domain Of
Death-Associated Protein Kinase
pdb|1JKT|A Chain A, Tetragonal Crystal Form Of A Catalytic Domain Of
Death-Associated Protein Kinase
pdb|1JKT|B Chain B, Tetragonal Crystal Form Of A Catalytic Domain Of
Death-Associated Protein Kinase
pdb|1JKK|A Chain A, 2.4a X-Ray Structure Of Ternary Complex Of A Catalytic
Domain Of Death-Associated Protein Kinase With Atp
Analogue And Mg.
pdb|3F5G|A Chain A, Crystal Structure Of Death Associated Protein Kinase In
Complex With Adp And Mg2+
pdb|3EH9|A Chain A, Crystal Structure Of Death Associated Protein Kinase
Complexed With Adp
pdb|3EHA|A Chain A, Crystal Structure Of Death Associated Protein Kinase
Complexed With Amppnp
Length = 294
Score = 46.6 bits (109), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 35/139 (25%), Positives = 67/139 (48%), Gaps = 12/139 (8%)
Query: 297 GSKVASGSYGDLY--RGTYCSQDVAIKVLKPERINSDMQ----KEFAQEVFIMRKVRHKN 350
G ++ SG + + R A K +K R S + ++ +EV I+++++H N
Sbjct: 15 GEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPN 74
Query: 351 VVQFIGACTKPPSLCIVTEFMSGGSVYDYLHKLKGVF--KLPSLLKVAIDVSKGMNYLHQ 408
V+ + ++ E ++GG ++D+L + + + + LK ++ G+ YLH
Sbjct: 75 VITLHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEATEFLKQILN---GVYYLHS 131
Query: 409 NNIIHRDLKAAN-LLMDEN 426
I H DLK N +L+D N
Sbjct: 132 LQIAHFDLKPENIMLLDRN 150
>pdb|2IW8|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A F82h-L83v-
H84d Mutant With An O6-Cyclohexylmethylguanine Inhibitor
pdb|2IW8|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A F82h-L83v-
H84d Mutant With An O6-Cyclohexylmethylguanine Inhibitor
Length = 302
Score = 46.6 bits (109), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 32/136 (23%), Positives = 64/136 (47%), Gaps = 18/136 (13%)
Query: 299 KVASGSYGDLY--RGTYCSQDVAIKVLKPERINSDMQKEFAQEVFIMRKVRHKNVVQFIG 356
K+ G+YG +Y R + VA+K ++ + + +E+ +++++ H N+V+ +
Sbjct: 13 KIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLD 72
Query: 357 ACTKPPSLCIVTE--------FMSGGSVYDYLHKLKGVFKLPSLLKVAIDVSKGMNYLHQ 408
L +V E FM + L G+ LP + + +G+ + H
Sbjct: 73 VIHTENKLYLVFEHVDQDLKKFMDASA-------LTGI-PLPLIKSYLFQLLQGLAFCHS 124
Query: 409 NNIIHRDLKAANLLMD 424
+ ++HRDLK NLL++
Sbjct: 125 HRVLHRDLKPQNLLIN 140
>pdb|3NYN|A Chain A, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Sangivamycin
pdb|3NYN|B Chain B, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Sangivamycin
pdb|3NYO|A Chain A, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Amp
pdb|3NYO|B Chain B, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Amp
Length = 576
Score = 46.6 bits (109), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 26/86 (30%), Positives = 45/86 (52%), Gaps = 1/86 (1%)
Query: 342 IMRKVRHKNVVQFIGACTKPPSLCIVTEFMSGGSV-YDYLHKLKGVFKLPSLLKVAIDVS 400
I+ KV + VV A +LC+V M+GG + + H + F + A ++
Sbjct: 237 ILEKVNSRFVVSLAYAYETKDALCLVLTLMNGGDLKFHIYHMGQAGFPEARAVFYAAEIC 296
Query: 401 KGMNYLHQNNIIHRDLKAANLLMDEN 426
G+ LH+ I++RDLK N+L+D++
Sbjct: 297 CGLEDLHRERIVYRDLKPENILLDDH 322
>pdb|1P4F|A Chain A, Death Associated Protein Kinase Catalytic Domain With
Bound Inhibitor Fragment
Length = 293
Score = 46.6 bits (109), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 35/139 (25%), Positives = 67/139 (48%), Gaps = 12/139 (8%)
Query: 297 GSKVASGSYGDLY--RGTYCSQDVAIKVLKPERINSDMQ----KEFAQEVFIMRKVRHKN 350
G ++ SG + + R A K +K R S + ++ +EV I+++++H N
Sbjct: 15 GEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPN 74
Query: 351 VVQFIGACTKPPSLCIVTEFMSGGSVYDYLHKLKGVF--KLPSLLKVAIDVSKGMNYLHQ 408
V+ + ++ E ++GG ++D+L + + + + LK ++ G+ YLH
Sbjct: 75 VITLHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEATEFLKQILN---GVYYLHS 131
Query: 409 NNIIHRDLKAAN-LLMDEN 426
I H DLK N +L+D N
Sbjct: 132 LQIAHFDLKPENIMLLDRN 150
>pdb|3DFC|B Chain B, Crystal Structure Of A Glycine-Rich Loop Mutant Of The
Death Associated Protein Kinase Catalytic Domain With
Amppnp
pdb|3DGK|A Chain A, Crystal Structure Of A Glycine-Rich Loop Mutant Of The
Death Associated Protein Kinase Catalytic Domain
Length = 295
Score = 46.6 bits (109), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 35/139 (25%), Positives = 67/139 (48%), Gaps = 12/139 (8%)
Query: 297 GSKVASGSYGDLY--RGTYCSQDVAIKVLKPERINSDMQ----KEFAQEVFIMRKVRHKN 350
G ++ SG + + R A K +K R S + ++ +EV I+++++H N
Sbjct: 16 GEELGSGKFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPN 75
Query: 351 VVQFIGACTKPPSLCIVTEFMSGGSVYDYLHKLKGVF--KLPSLLKVAIDVSKGMNYLHQ 408
V+ + ++ E ++GG ++D+L + + + + LK ++ G+ YLH
Sbjct: 76 VITLHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEATEFLKQILN---GVYYLHS 132
Query: 409 NNIIHRDLKAAN-LLMDEN 426
I H DLK N +L+D N
Sbjct: 133 LQIAHFDLKPENIMLLDRN 151
>pdb|3F5U|A Chain A, Crystal Structure Of The Death Associated Protein Kinase
In Complex With Amppnp And Mg2+
Length = 295
Score = 46.6 bits (109), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 35/139 (25%), Positives = 67/139 (48%), Gaps = 12/139 (8%)
Query: 297 GSKVASGSYGDLY--RGTYCSQDVAIKVLKPERINSDMQ----KEFAQEVFIMRKVRHKN 350
G ++ SG + + R A K +K R S + ++ +EV I+++++H N
Sbjct: 16 GEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPN 75
Query: 351 VVQFIGACTKPPSLCIVTEFMSGGSVYDYLHKLKGVF--KLPSLLKVAIDVSKGMNYLHQ 408
V+ + ++ E ++GG ++D+L + + + + LK ++ G+ YLH
Sbjct: 76 VITLHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEATEFLKQILN---GVYYLHS 132
Query: 409 NNIIHRDLKAAN-LLMDEN 426
I H DLK N +L+D N
Sbjct: 133 LQIAHFDLKPENIMLLDRN 151
>pdb|4FV7|A Chain A, Crystal Structure Of The Erk2 Complexed With E94
pdb|4G6O|A Chain A, Crystal Structure Of The Erk2
Length = 360
Score = 46.6 bits (109), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 43/170 (25%), Positives = 80/170 (47%), Gaps = 31/170 (18%)
Query: 286 VWEIDPKHLKFGSKVASGSYGDLYRGTYCSQ-------DVAIKVLKPERINSDMQKEFAQ 338
V+++ P++ S + G+YG CS VAIK + P + Q+ +
Sbjct: 18 VFDVGPRYTNL-SYIGEGAYG-----MVCSAYDNVNKVRVAIKKISPFEHQTYCQRTL-R 70
Query: 339 EVFIMRKVRHKNVVQFIGACTKPPSL------CIVTEFMSGGSVYDYLHKLKGVFKLPS- 391
E+ I+ + RH+N++ I + P++ IV + M L+KL L +
Sbjct: 71 EIKILLRFRHENIIG-INDIIRAPTIEQMKDVYIVQDLMETD-----LYKLLKTQHLSND 124
Query: 392 -LLKVAIDVSKGMNYLHQNNIIHRDLKAANLLMDENEVSLLLSLCLFTVS 440
+ + +G+ Y+H N++HRDLK +NLL++ + L +C F ++
Sbjct: 125 HICYFLYQILRGLKYIHSANVLHRDLKPSNLLLN---TTXDLKICDFGLA 171
>pdb|2WEL|A Chain A, Crystal Structure Of Su6656-Bound CalciumCALMODULIN-
Dependent Protein Kinase Ii Delta In Complex With
Calmodulin
Length = 327
Score = 46.6 bits (109), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 27/127 (21%), Positives = 64/127 (50%), Gaps = 1/127 (0%)
Query: 315 SQDVAIKVLKPERINSDMQKEFAQEVFIMRKVRHKNVVQFIGACTKPPSLCIVTEFMSGG 374
Q+ A K++ +++++ ++ +E I R ++H N+V+ + ++ +V + ++GG
Sbjct: 29 GQEYAAKIINTKKLSARDHQKLEREARICRLLKHPNIVRLHDSISEEGFHYLVFDLVTGG 88
Query: 375 SVYDYLHKLKGVFKLPSLLKVAIDVSKGMNYLHQNNIIHRDLKAANLLMDENEVSLLLSL 434
+++ + + + + + +N+ H N I+HRDLK NLL+ + L
Sbjct: 89 ELFEDI-VAREYYSEADASHCIQQILESVNHCHLNGIVHRDLKPENLLLASKSKGAAVKL 147
Query: 435 CLFTVSI 441
F ++I
Sbjct: 148 ADFGLAI 154
>pdb|3GU8|A Chain A, Crystal Structure Of Dapkl93g With N6-Cyclopentyladenosine
pdb|3GUB|A Chain A, Crystal Structure Of Dapkl93g Complexed With N6-(2-
Phenylethyl)adenosine
Length = 295
Score = 46.6 bits (109), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 35/139 (25%), Positives = 67/139 (48%), Gaps = 12/139 (8%)
Query: 297 GSKVASGSYGDLY--RGTYCSQDVAIKVLKPERINSDMQ----KEFAQEVFIMRKVRHKN 350
G ++ SG + + R A K +K R S + ++ +EV I+++++H N
Sbjct: 16 GEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPN 75
Query: 351 VVQFIGACTKPPSLCIVTEFMSGGSVYDYLHKLKGVF--KLPSLLKVAIDVSKGMNYLHQ 408
V+ + ++ E ++GG ++D+L + + + + LK ++ G+ YLH
Sbjct: 76 VITLHEVYENKTDVILIGELVAGGELFDFLAEKESLTEEEATEFLKQILN---GVYYLHS 132
Query: 409 NNIIHRDLKAAN-LLMDEN 426
I H DLK N +L+D N
Sbjct: 133 LQIAHFDLKPENIMLLDRN 151
>pdb|2WTK|B Chain B, Structure Of The Heterotrimeric Lkb1-Stradalpha-Mo25alpha
Complex
pdb|2WTK|E Chain E, Structure Of The Heterotrimeric Lkb1-Stradalpha-Mo25alpha
Complex
Length = 373
Score = 46.6 bits (109), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 29/119 (24%), Positives = 60/119 (50%), Gaps = 3/119 (2%)
Query: 307 DLYRGTYCSQDVAIKVLKPERINSDMQKEFAQEVFIMRKVRHKNVVQFIGACTKPPSLCI 366
+L R + V ++ + E +++M E+ + + H N+V + L +
Sbjct: 28 NLARYKPTGEYVTVRRINLEACSNEMVTFLQGELHVSKLFNHPNIVPYRATFIADNELWV 87
Query: 367 VTEFMSGGSVYDYL--HKLKGVFKLPSLLKVAIDVSKGMNYLHQNNIIHRDLKAANLLM 423
VT FM+ GS D + H + G+ +L ++ + V K ++Y+H +HR +KA+++L+
Sbjct: 88 VTSFMAYGSAKDLICTHFMDGMNEL-AIAYILQGVLKALDYIHHMGYVHRSVKASHILI 145
>pdb|1WZY|A Chain A, Crystal Structure Of Human Erk2 Complexed With A
Pyrazolopyridazine Derivative
pdb|3W55|A Chain A, The Structure Of Erk2 In Complex With Fr148083
Length = 368
Score = 46.6 bits (109), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 43/170 (25%), Positives = 80/170 (47%), Gaps = 31/170 (18%)
Query: 286 VWEIDPKHLKFGSKVASGSYGDLYRGTYCSQ-------DVAIKVLKPERINSDMQKEFAQ 338
V+++ P++ S + G+YG CS VAIK + P + Q+ +
Sbjct: 26 VFDVGPRYTNL-SYIGEGAYG-----MVCSAYDNVNKVRVAIKKISPFEHQTYCQRTL-R 78
Query: 339 EVFIMRKVRHKNVVQFIGACTKPPSL------CIVTEFMSGGSVYDYLHKLKGVFKLPS- 391
E+ I+ + RH+N++ I + P++ IV + M L+KL L +
Sbjct: 79 EIKILLRFRHENIIG-INDIIRAPTIEQMKDVYIVQDLMETD-----LYKLLKTQHLSND 132
Query: 392 -LLKVAIDVSKGMNYLHQNNIIHRDLKAANLLMDENEVSLLLSLCLFTVS 440
+ + +G+ Y+H N++HRDLK +NLL++ + L +C F ++
Sbjct: 133 HICYFLYQILRGLKYIHSANVLHRDLKPSNLLLN---TTCDLKICDFGLA 179
>pdb|1TVO|A Chain A, The Structure Of Erk2 In Complex With A Small Molecule
Inhibitor
Length = 368
Score = 46.6 bits (109), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 43/170 (25%), Positives = 80/170 (47%), Gaps = 31/170 (18%)
Query: 286 VWEIDPKHLKFGSKVASGSYGDLYRGTYCSQ-------DVAIKVLKPERINSDMQKEFAQ 338
V+++ P++ S + G+YG CS VAIK + P + Q+ +
Sbjct: 18 VFDVGPRYTNL-SYIGEGAYG-----MVCSAYDNVNKVRVAIKKISPFEHQTYCQRTL-R 70
Query: 339 EVFIMRKVRHKNVVQFIGACTKPPSL------CIVTEFMSGGSVYDYLHKLKGVFKLPS- 391
E+ I+ + RH+N++ I + P++ IV + M L+KL L +
Sbjct: 71 EIKILLRFRHENIIG-INDIIRAPTIEQMKDVYIVQDLMETD-----LYKLLKTQHLSND 124
Query: 392 -LLKVAIDVSKGMNYLHQNNIIHRDLKAANLLMDENEVSLLLSLCLFTVS 440
+ + +G+ Y+H N++HRDLK +NLL++ + L +C F ++
Sbjct: 125 HICYFLYQILRGLKYIHSANVLHRDLKPSNLLLN---TTCDLKICDFGLA 171
>pdb|3ZU7|A Chain A, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Map Kinase Erk2
Length = 365
Score = 46.6 bits (109), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 43/170 (25%), Positives = 80/170 (47%), Gaps = 31/170 (18%)
Query: 286 VWEIDPKHLKFGSKVASGSYGDLYRGTYCSQ-------DVAIKVLKPERINSDMQKEFAQ 338
V+++ P++ S + G+YG CS VAIK + P + Q+ +
Sbjct: 23 VFDVGPRYTNL-SYIGEGAYG-----MVCSAYDNLNKVRVAIKKISPFEHQTYCQRTL-R 75
Query: 339 EVFIMRKVRHKNVVQFIGACTKPPSL------CIVTEFMSGGSVYDYLHKLKGVFKLPS- 391
E+ I+ + RH+N++ I + P++ IV + M L+KL L +
Sbjct: 76 EIKILLRFRHENIIG-INDIIRAPTIEQMKDVYIVQDLMETD-----LYKLLKTQHLSND 129
Query: 392 -LLKVAIDVSKGMNYLHQNNIIHRDLKAANLLMDENEVSLLLSLCLFTVS 440
+ + +G+ Y+H N++HRDLK +NLL++ + L +C F ++
Sbjct: 130 HICYFLYQILRGLKYIHSANVLHRDLKPSNLLLN---TTCDLKICDFGLA 176
>pdb|3LL6|A Chain A, Crystal Structure Of The Human Cyclin G Associated Kinase
(gak)
pdb|3LL6|B Chain B, Crystal Structure Of The Human Cyclin G Associated Kinase
(gak)
Length = 337
Score = 46.6 bits (109), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 34/117 (29%), Positives = 56/117 (47%), Gaps = 17/117 (14%)
Query: 334 KEFAQEVFIMRKVR-HKNVVQFIGAC--------TKPPSLCIVTEFMSGGSVYDYLHKL- 383
+ QEV M+K+ H N+VQF A T ++TE + G + ++L K+
Sbjct: 70 RAIIQEVCFMKKLSGHPNIVQFCSAASIGKEESDTGQAEFLLLTE-LCKGQLVEFLKKME 128
Query: 384 -KGVFKLPSLLKVAIDVSKGMNYLHQNN--IIHRDLKAANLLMDENEVSLLLSLCLF 437
+G ++LK+ + + ++H+ IIHRDLK NLL+ + LC F
Sbjct: 129 SRGPLSCDTVLKIFYQTCRAVQHMHRQKPPIIHRDLKVENLLLSNQGT---IKLCDF 182
>pdb|3IS5|A Chain A, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|B Chain B, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|C Chain C, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|D Chain D, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|E Chain E, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|F Chain F, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
Length = 285
Score = 46.6 bits (109), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 36/153 (23%), Positives = 72/153 (47%), Gaps = 6/153 (3%)
Query: 296 FGSKVASGSYGDLYRGTYCSQDV--AIKVLKPERINSDMQKEFAQEVFIMRKVRHKNVVQ 353
F K+ SG++GD++ S + IK + +R M+ + E+ +++ + H N+++
Sbjct: 26 FKRKLGSGAFGDVHLVEERSSGLERVIKTINKDRSQVPME-QIEAEIEVLKSLDHPNIIK 84
Query: 354 FIGACTKPPSLCIVTEFMSGGSVYDYLHKLKGVFKLPSLLKVAIDVSKGMN---YLHQNN 410
++ IV E GG + + + + K S VA + + MN Y H +
Sbjct: 85 IFEVFEDYHNMYIVMETCEGGELLERIVSAQARGKALSEGYVAELMKQMMNALAYFHSQH 144
Query: 411 IIHRDLKAANLLMDENEVSLLLSLCLFTVSILF 443
++H+DLK N+L + + + F ++ LF
Sbjct: 145 VVHKDLKPENILFQDTSPHSPIKIIDFGLAELF 177
>pdb|2Z7L|A Chain A, Unphosphorylated Mitogen Activated Protein Kinase Erk2 In
Complex With
(4-{[5-Carbamoyl-4-(3-Methylanilino)pyrimidin
2-Yl]amino}phenyl)acetic Acid
Length = 366
Score = 46.6 bits (109), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 43/170 (25%), Positives = 80/170 (47%), Gaps = 31/170 (18%)
Query: 286 VWEIDPKHLKFGSKVASGSYGDLYRGTYCSQ-------DVAIKVLKPERINSDMQKEFAQ 338
V+++ P++ S + G+YG CS VAIK + P + Q+ +
Sbjct: 24 VFDVGPRYTNL-SYIGEGAYG-----MVCSAYDNLNKVRVAIKKISPFEHQTYCQRTL-R 76
Query: 339 EVFIMRKVRHKNVVQFIGACTKPPSL------CIVTEFMSGGSVYDYLHKLKGVFKLPS- 391
E+ I+ + RH+N++ I + P++ IV + M L+KL L +
Sbjct: 77 EIKILLRFRHENIIG-INDIIRAPTIEQMKDVYIVQDLMETD-----LYKLLKTQHLSND 130
Query: 392 -LLKVAIDVSKGMNYLHQNNIIHRDLKAANLLMDENEVSLLLSLCLFTVS 440
+ + +G+ Y+H N++HRDLK +NLL++ + L +C F ++
Sbjct: 131 HICYFLYQILRGLKYIHSANVLHRDLKPSNLLLN---TTCDLKICDFGLA 177
>pdb|3C9W|A Chain A, Crystal Structure Of Erk-2 With Hypothemycin Covalently
Bound
pdb|3C9W|B Chain B, Crystal Structure Of Erk-2 With Hypothemycin Covalently
Bound
Length = 357
Score = 46.6 bits (109), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 43/170 (25%), Positives = 80/170 (47%), Gaps = 31/170 (18%)
Query: 286 VWEIDPKHLKFGSKVASGSYGDLYRGTYCSQ-------DVAIKVLKPERINSDMQKEFAQ 338
V+++ P++ S + G+YG CS VAIK + P + Q+ +
Sbjct: 15 VFDVGPRYTNL-SYIGEGAYG-----MVCSAYDNLNKVRVAIKKISPFEHQTYCQRTL-R 67
Query: 339 EVFIMRKVRHKNVVQFIGACTKPPSL------CIVTEFMSGGSVYDYLHKLKGVFKLPS- 391
E+ I+ + RH+N++ I + P++ IV + M L+KL L +
Sbjct: 68 EIKILLRFRHENIIG-INDIIRAPTIEQMKDVYIVQDLMETD-----LYKLLKTQHLSND 121
Query: 392 -LLKVAIDVSKGMNYLHQNNIIHRDLKAANLLMDENEVSLLLSLCLFTVS 440
+ + +G+ Y+H N++HRDLK +NLL++ + L +C F ++
Sbjct: 122 HICYFLYQILRGLKYIHSANVLHRDLKPSNLLLN---TTCDLKICDFGLA 168
>pdb|2FYS|B Chain B, Crystal Structure Of Erk2 Complex With Kim Peptide Derived
From Mkp3
pdb|2FYS|A Chain A, Crystal Structure Of Erk2 Complex With Kim Peptide Derived
From Mkp3
pdb|1ERK|A Chain A, Structure Of Signal-Regulated Kinase
pdb|3ERK|A Chain A, The Complex Structure Of The Map Kinase Erk2SB220025
pdb|4ERK|A Chain A, The Complex Structure Of The Map Kinase Erk2OLOMOUCINE
pdb|3QYI|A Chain A, Map Kinase Erk2 Complexed With
1,1-Dioxo-2,3-Dihydrothiophen-3-Yl Benzenesulfonate
Length = 364
Score = 46.6 bits (109), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 43/170 (25%), Positives = 80/170 (47%), Gaps = 31/170 (18%)
Query: 286 VWEIDPKHLKFGSKVASGSYGDLYRGTYCSQ-------DVAIKVLKPERINSDMQKEFAQ 338
V+++ P++ S + G+YG CS VAIK + P + Q+ +
Sbjct: 22 VFDVGPRYTNL-SYIGEGAYG-----MVCSAYDNLNKVRVAIKKISPFEHQTYCQRTL-R 74
Query: 339 EVFIMRKVRHKNVVQFIGACTKPPSL------CIVTEFMSGGSVYDYLHKLKGVFKLPS- 391
E+ I+ + RH+N++ I + P++ IV + M L+KL L +
Sbjct: 75 EIKILLRFRHENIIG-INDIIRAPTIEQMKDVYIVQDLMETD-----LYKLLKTQHLSND 128
Query: 392 -LLKVAIDVSKGMNYLHQNNIIHRDLKAANLLMDENEVSLLLSLCLFTVS 440
+ + +G+ Y+H N++HRDLK +NLL++ + L +C F ++
Sbjct: 129 HICYFLYQILRGLKYIHSANVLHRDLKPSNLLLN---TTCDLKICDFGLA 175
>pdb|3GNI|B Chain B, Structure Of Strad And Mo25
Length = 389
Score = 46.6 bits (109), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 29/119 (24%), Positives = 60/119 (50%), Gaps = 3/119 (2%)
Query: 307 DLYRGTYCSQDVAIKVLKPERINSDMQKEFAQEVFIMRKVRHKNVVQFIGACTKPPSLCI 366
+L R + V ++ + E +++M E+ + + H N+V + L +
Sbjct: 44 NLARYKPTGEYVTVRRINLEACSNEMVTFLQGELHVSKLFNHPNIVPYRATFIADNELWV 103
Query: 367 VTEFMSGGSVYDYL--HKLKGVFKLPSLLKVAIDVSKGMNYLHQNNIIHRDLKAANLLM 423
VT FM+ GS D + H + G+ +L ++ + V K ++Y+H +HR +KA+++L+
Sbjct: 104 VTSFMAYGSAKDLICTHFMDGMNEL-AIAYILQGVLKALDYIHHMGYVHRSVKASHILI 161
>pdb|2I6L|A Chain A, Crystal Structure Of Human Mitogen Activated Protein
Kinase 6 (Mapk6)
pdb|2I6L|B Chain B, Crystal Structure Of Human Mitogen Activated Protein
Kinase 6 (Mapk6)
Length = 320
Score = 46.6 bits (109), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 38/138 (27%), Positives = 66/138 (47%), Gaps = 33/138 (23%)
Query: 314 CSQDVAIKVLKPERINSDMQ--KEFAQEVFIMRKVRHKNVVQF--------------IGA 357
C + VAIK + + +D Q K +E+ I+R++ H N+V+ +G+
Sbjct: 35 CDKRVAIKKI----VLTDPQSVKHALREIKIIRRLDHDNIVKVFEILGPSGSQLTDDVGS 90
Query: 358 CTKPPSLCIVTEFMSGGSVYDYLHKLKGVFKLPSLLK-----VAIDVSKGMNYLHQNNII 412
T+ S+ IV E+M L V + LL+ + +G+ Y+H N++
Sbjct: 91 LTELNSVYIVQEYMET--------DLANVLEQGPLLEEHARLFMYQLLRGLKYIHSANVL 142
Query: 413 HRDLKAANLLMDENEVSL 430
HRDLK ANL ++ ++ L
Sbjct: 143 HRDLKPANLFINTEDLVL 160
>pdb|4FV6|A Chain A, Crystal Structure Of The Erk2 Complexed With E57
Length = 360
Score = 46.6 bits (109), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 43/170 (25%), Positives = 80/170 (47%), Gaps = 31/170 (18%)
Query: 286 VWEIDPKHLKFGSKVASGSYGDLYRGTYCSQ-------DVAIKVLKPERINSDMQKEFAQ 338
V+++ P++ S + G+YG CS VAIK + P + Q+ +
Sbjct: 18 VFDVGPRYTNL-SYIGEGAYG-----MVCSAYDNVNKVRVAIKKISPFEHQTYCQRTL-R 70
Query: 339 EVFIMRKVRHKNVVQFIGACTKPPSL------CIVTEFMSGGSVYDYLHKLKGVFKLPS- 391
E+ I+ + RH+N++ I + P++ IV + M L+KL L +
Sbjct: 71 EIKILLRFRHENIIG-INDIIRAPTIEQMKDVYIVQDLMETD-----LYKLLKTQHLSND 124
Query: 392 -LLKVAIDVSKGMNYLHQNNIIHRDLKAANLLMDENEVSLLLSLCLFTVS 440
+ + +G+ Y+H N++HRDLK +NLL++ + L +C F ++
Sbjct: 125 HICYFLYQILRGLKYIHSANVLHRDLKPSNLLLN---TTCDLKICDFGLA 171
>pdb|3R63|A Chain A, Structure Of Erk2 (Spe) Mutant (S246e)
Length = 358
Score = 46.6 bits (109), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 43/170 (25%), Positives = 80/170 (47%), Gaps = 31/170 (18%)
Query: 286 VWEIDPKHLKFGSKVASGSYGDLYRGTYCSQ-------DVAIKVLKPERINSDMQKEFAQ 338
V+++ P++ S + G+YG CS VAIK + P + Q+ +
Sbjct: 16 VFDVGPRYTNL-SYIGEGAYG-----MVCSAYDNLNKVRVAIKKISPFEHQTYCQRTL-R 68
Query: 339 EVFIMRKVRHKNVVQFIGACTKPPSL------CIVTEFMSGGSVYDYLHKLKGVFKLPS- 391
E+ I+ + RH+N++ I + P++ IV + M L+KL L +
Sbjct: 69 EIKILLRFRHENIIG-INDIIRAPTIEQMKDVYIVQDLMETD-----LYKLLKTQHLSND 122
Query: 392 -LLKVAIDVSKGMNYLHQNNIIHRDLKAANLLMDENEVSLLLSLCLFTVS 440
+ + +G+ Y+H N++HRDLK +NLL++ + L +C F ++
Sbjct: 123 HICYFLYQILRGLKYIHSANVLHRDLKPSNLLLN---TTCDLKICDFGLA 169
>pdb|3QYW|A Chain A, Crystal Structure Of Erk2 In Complex With An Inhibitor
pdb|3QYZ|A Chain A, Crystal Structure Of Erk2 In Complex With An Inhibitor
pdb|4GT3|A Chain A, Atp-Bound Form Of The Erk2 Kinase
pdb|4GVA|A Chain A, Adp-Bound Form Of The Erk2 Kinase
Length = 364
Score = 46.6 bits (109), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 43/170 (25%), Positives = 80/170 (47%), Gaps = 31/170 (18%)
Query: 286 VWEIDPKHLKFGSKVASGSYGDLYRGTYCSQ-------DVAIKVLKPERINSDMQKEFAQ 338
V+++ P++ S + G+YG CS VAIK + P + Q+ +
Sbjct: 22 VFDVGPRYTNL-SYIGEGAYG-----MVCSAYDNLNKVRVAIKKISPFEHQTYCQRTL-R 74
Query: 339 EVFIMRKVRHKNVVQFIGACTKPPSL------CIVTEFMSGGSVYDYLHKLKGVFKLPS- 391
E+ I+ + RH+N++ I + P++ IV + M L+KL L +
Sbjct: 75 EIKILLRFRHENIIG-INDIIRAPTIEQMKDVYIVQDLMETD-----LYKLLKTQHLSND 128
Query: 392 -LLKVAIDVSKGMNYLHQNNIIHRDLKAANLLMDENEVSLLLSLCLFTVS 440
+ + +G+ Y+H N++HRDLK +NLL++ + L +C F ++
Sbjct: 129 HICYFLYQILRGLKYIHSANVLHRDLKPSNLLLN---TTXDLKICDFGLA 175
>pdb|4FUX|A Chain A, Crystal Structure Of The Erk2 Complexed With E75
pdb|4FV1|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek4
pdb|4FV2|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek5
pdb|4FV3|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek6
pdb|4FV4|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek7
pdb|4FV5|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek9
pdb|4FV8|A Chain A, Crystal Structure Of The Erk2 Complexed With E63
pdb|4FV9|A Chain A, Crystal Structure Of The Erk2 Complexed With E71
pdb|4G6N|A Chain A, Crystal Structure Of The Erk2
Length = 360
Score = 46.6 bits (109), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 43/170 (25%), Positives = 80/170 (47%), Gaps = 31/170 (18%)
Query: 286 VWEIDPKHLKFGSKVASGSYGDLYRGTYCSQ-------DVAIKVLKPERINSDMQKEFAQ 338
V+++ P++ S + G+YG CS VAIK + P + Q+ +
Sbjct: 18 VFDVGPRYTNL-SYIGEGAYG-----MVCSAYDNVNKVRVAIKKISPFEHQTYCQRTL-R 70
Query: 339 EVFIMRKVRHKNVVQFIGACTKPPSL------CIVTEFMSGGSVYDYLHKLKGVFKLPS- 391
E+ I+ + RH+N++ I + P++ IV + M L+KL L +
Sbjct: 71 EIKILLRFRHENIIG-INDIIRAPTIEQMKDVYIVQDLMETD-----LYKLLKTQHLSND 124
Query: 392 -LLKVAIDVSKGMNYLHQNNIIHRDLKAANLLMDENEVSLLLSLCLFTVS 440
+ + +G+ Y+H N++HRDLK +NLL++ + L +C F ++
Sbjct: 125 HICYFLYQILRGLKYIHSANVLHRDLKPSNLLLN---TTXDLKICDFGLA 171
>pdb|2XUU|A Chain A, Crystal Structure Of A Dap-Kinase 1 Mutant
Length = 334
Score = 46.6 bits (109), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 35/139 (25%), Positives = 67/139 (48%), Gaps = 12/139 (8%)
Query: 297 GSKVASGSYGDLY--RGTYCSQDVAIKVLKPERINSDMQ----KEFAQEVFIMRKVRHKN 350
G ++ SG + + R A K +K R S + ++ +EV I+++++H N
Sbjct: 16 GEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPN 75
Query: 351 VVQFIGACTKPPSLCIVTEFMSGGSVYDYLHKLKGVF--KLPSLLKVAIDVSKGMNYLHQ 408
V+ + ++ E ++GG ++D+L + + + + LK ++ G+ YLH
Sbjct: 76 VITLHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEATEFLKQILN---GVYYLHS 132
Query: 409 NNIIHRDLKAAN-LLMDEN 426
I H DLK N +L+D N
Sbjct: 133 LQIAHFDLKPENIMLLDRN 151
>pdb|2Y9Q|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4FMQ|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 46.6 bits (109), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 43/170 (25%), Positives = 80/170 (47%), Gaps = 31/170 (18%)
Query: 286 VWEIDPKHLKFGSKVASGSYGDLYRGTYCSQ-------DVAIKVLKPERINSDMQKEFAQ 338
V+++ P++ S + G+YG CS VAIK + P + Q+ +
Sbjct: 20 VFDVGPRYTNL-SYIGEGAYG-----MVCSAYDNVNKVRVAIKKISPFEHQTYCQRTL-R 72
Query: 339 EVFIMRKVRHKNVVQFIGACTKPPSL------CIVTEFMSGGSVYDYLHKLKGVFKLPS- 391
E+ I+ + RH+N++ I + P++ IV + M L+KL L +
Sbjct: 73 EIKILLRFRHENIIG-INDIIRAPTIEQMKDVYIVQDLMETD-----LYKLLKTQHLSND 126
Query: 392 -LLKVAIDVSKGMNYLHQNNIIHRDLKAANLLMDENEVSLLLSLCLFTVS 440
+ + +G+ Y+H N++HRDLK +NLL++ + L +C F ++
Sbjct: 127 HICYFLYQILRGLKYIHSANVLHRDLKPSNLLLN---TTCDLKICDFGLA 173
>pdb|3O71|A Chain A, Crystal Structure Of Erk2DCC PEPTIDE COMPLEX
Length = 358
Score = 46.6 bits (109), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 43/170 (25%), Positives = 80/170 (47%), Gaps = 31/170 (18%)
Query: 286 VWEIDPKHLKFGSKVASGSYGDLYRGTYCSQ-------DVAIKVLKPERINSDMQKEFAQ 338
V+++ P++ S + G+YG CS VAIK + P + Q+ +
Sbjct: 16 VFDVGPRYTNL-SYIGEGAYG-----MVCSAYDNLNKVRVAIKKISPFEHQTYCQRTL-R 68
Query: 339 EVFIMRKVRHKNVVQFIGACTKPPSL------CIVTEFMSGGSVYDYLHKLKGVFKLPS- 391
E+ I+ + RH+N++ I + P++ IV + M L+KL L +
Sbjct: 69 EIKILLRFRHENIIG-INDIIRAPTIEQMKDVYIVQDLMETD-----LYKLLKTQHLSND 122
Query: 392 -LLKVAIDVSKGMNYLHQNNIIHRDLKAANLLMDENEVSLLLSLCLFTVS 440
+ + +G+ Y+H N++HRDLK +NLL++ + L +C F ++
Sbjct: 123 HICYFLYQILRGLKYIHSANVLHRDLKPSNLLLN---TTCDLKICDFGLA 169
>pdb|3ZUV|A Chain A, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Phosphorylated Map Kinase
Erk2
pdb|3ZUV|C Chain C, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Phosphorylated Map Kinase
Erk2
Length = 364
Score = 46.6 bits (109), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 43/170 (25%), Positives = 80/170 (47%), Gaps = 31/170 (18%)
Query: 286 VWEIDPKHLKFGSKVASGSYGDLYRGTYCSQ-------DVAIKVLKPERINSDMQKEFAQ 338
V+++ P++ S + G+YG CS VAIK + P + Q+ +
Sbjct: 22 VFDVGPRYTNL-SYIGEGAYG-----MVCSAYDNLNKVRVAIKKISPFEHQTYCQRTL-R 74
Query: 339 EVFIMRKVRHKNVVQFIGACTKPPSL------CIVTEFMSGGSVYDYLHKLKGVFKLPS- 391
E+ I+ + RH+N++ I + P++ IV + M L+KL L +
Sbjct: 75 EIKILLRFRHENIIG-INDIIRAPTIEQMKDVYIVQDLMETD-----LYKLLKTQHLSND 128
Query: 392 -LLKVAIDVSKGMNYLHQNNIIHRDLKAANLLMDENEVSLLLSLCLFTVS 440
+ + +G+ Y+H N++HRDLK +NLL++ + L +C F ++
Sbjct: 129 HICYFLYQILRGLKYIHSANVLHRDLKPSNLLLN---TTCDLKICDFGLA 175
>pdb|2XZS|A Chain A, Death Associated Protein Kinase 1 Residues 1-312
pdb|2XZS|B Chain B, Death Associated Protein Kinase 1 Residues 1-312
Length = 312
Score = 46.6 bits (109), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 35/139 (25%), Positives = 67/139 (48%), Gaps = 12/139 (8%)
Query: 297 GSKVASGSYGDLY--RGTYCSQDVAIKVLKPERINSDMQ----KEFAQEVFIMRKVRHKN 350
G ++ SG + + R A K +K R S + ++ +EV I+++++H N
Sbjct: 16 GEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPN 75
Query: 351 VVQFIGACTKPPSLCIVTEFMSGGSVYDYLHKLKGVF--KLPSLLKVAIDVSKGMNYLHQ 408
V+ + ++ E ++GG ++D+L + + + + LK ++ G+ YLH
Sbjct: 76 VITLHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEATEFLKQILN---GVYYLHS 132
Query: 409 NNIIHRDLKAAN-LLMDEN 426
I H DLK N +L+D N
Sbjct: 133 LQIAHFDLKPENIMLLDRN 151
>pdb|2ERK|A Chain A, Phosphorylated Map Kinase Erk2
Length = 365
Score = 46.6 bits (109), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 43/170 (25%), Positives = 80/170 (47%), Gaps = 31/170 (18%)
Query: 286 VWEIDPKHLKFGSKVASGSYGDLYRGTYCSQ-------DVAIKVLKPERINSDMQKEFAQ 338
V+++ P++ S + G+YG CS VAIK + P + Q+ +
Sbjct: 23 VFDVGPRYTNL-SYIGEGAYG-----MVCSAYDNLNKVRVAIKKISPFEHQTYCQRTL-R 75
Query: 339 EVFIMRKVRHKNVVQFIGACTKPPSL------CIVTEFMSGGSVYDYLHKLKGVFKLPS- 391
E+ I+ + RH+N++ I + P++ IV + M L+KL L +
Sbjct: 76 EIKILLRFRHENIIG-INDIIRAPTIEQMKDVYIVQDLMETD-----LYKLLKTQHLSND 129
Query: 392 -LLKVAIDVSKGMNYLHQNNIIHRDLKAANLLMDENEVSLLLSLCLFTVS 440
+ + +G+ Y+H N++HRDLK +NLL++ + L +C F ++
Sbjct: 130 HICYFLYQILRGLKYIHSANVLHRDLKPSNLLLN---TTCDLKICDFGLA 176
>pdb|1YXS|A Chain A, Crystal Structure Of Kinase Pim1 With P123m Mutation
Length = 293
Score = 46.2 bits (108), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 36/147 (24%), Positives = 70/147 (47%), Gaps = 10/147 (6%)
Query: 295 KFGSKVASGSYGDLYRGTYCSQD--VAIKVLKPERINSDMQ----KEFAQEVFIMRKVR- 347
+ G + SG +G +Y G S + VAIK ++ +RI+ + EV +++KV
Sbjct: 11 QVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSS 70
Query: 348 -HKNVVQFIGACTKPPSLCIVTEFMSG-GSVYDYLHKLKGVFKLPSLLKVAIDVSKGMNY 405
V++ + +P S ++ E M ++D++ + +G + V + + +
Sbjct: 71 GFSGVIRLLDWFERPDSFVLILERMEPVQDLFDFITE-RGALQEELARSFFWQVLEAVRH 129
Query: 406 LHQNNIIHRDLKAANLLMDENEVSLLL 432
H ++HRD+K N+L+D N L L
Sbjct: 130 CHNCGVLHRDIKDENILIDLNRGELKL 156
>pdb|2VN9|A Chain A, Crystal Structure Of Human Calcium Calmodulin Dependent
Protein Kinase Ii Delta Isoform 1, Camkd
pdb|2VN9|B Chain B, Crystal Structure Of Human Calcium Calmodulin Dependent
Protein Kinase Ii Delta Isoform 1, Camkd
Length = 301
Score = 46.2 bits (108), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 27/127 (21%), Positives = 64/127 (50%), Gaps = 1/127 (0%)
Query: 315 SQDVAIKVLKPERINSDMQKEFAQEVFIMRKVRHKNVVQFIGACTKPPSLCIVTEFMSGG 374
Q+ A K++ +++++ ++ +E I R ++H N+V+ + ++ +V + ++GG
Sbjct: 29 GQEYAAKIINTKKLSARDHQKLEREARICRLLKHPNIVRLHDSISEEGFHYLVFDLVTGG 88
Query: 375 SVYDYLHKLKGVFKLPSLLKVAIDVSKGMNYLHQNNIIHRDLKAANLLMDENEVSLLLSL 434
+++ + + + + + +N+ H N I+HRDLK NLL+ + L
Sbjct: 89 ELFEDI-VAREYYSEADASHCIQQILESVNHCHLNGIVHRDLKPENLLLASKSKGAAVKL 147
Query: 435 CLFTVSI 441
F ++I
Sbjct: 148 ADFGLAI 154
>pdb|2OJG|A Chain A, Crystal Structure Of Erk2 In Complex With
N,n-dimethyl-4-(4-
Phenyl-1h-pyrazol-3-yl)-1h-pyrrole-2-carboxamide
pdb|2OJI|A Chain A, Crystal Structure Of Erk2 In Complex With
N-Benzyl-4-(4-(3-
Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide
pdb|2OJJ|A Chain A, Crystal Structure Of Erk2 In Complex With (S)-N-(1-(3-
Chloro-4-Fluorophenyl)-2-Hydroxyethyl)-4-(4-(3-
Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide
pdb|3I5Z|A Chain A, Crystal Structure Of Erk2 Bound To
(S)-N-(2-Hydroxy-1-Phenylethyl)-4-
(5-Methyl-2-(Phenylamino)pyrimidin-4-Yl)-1h-Pyrrole-2-
Carboxamide
pdb|3I60|A Chain A, Crystal Structure Of Erk2 Bound To
(s)-4-(2-(2-chlorophenylamino)-5-
Methylpyrimidin-4-yl)-n-(2-hydroxy-1-phenylethyl)-1h-
pyrrole-2- Carboxamide
Length = 380
Score = 46.2 bits (108), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 43/170 (25%), Positives = 80/170 (47%), Gaps = 31/170 (18%)
Query: 286 VWEIDPKHLKFGSKVASGSYGDLYRGTYCSQ-------DVAIKVLKPERINSDMQKEFAQ 338
V+++ P++ S + G+YG CS VAIK + P + Q+ +
Sbjct: 38 VFDVGPRYTNL-SYIGEGAYG-----MVCSAYDNVNKVRVAIKKISPFEHQTYCQRTL-R 90
Query: 339 EVFIMRKVRHKNVVQFIGACTKPPSL------CIVTEFMSGGSVYDYLHKLKGVFKLPS- 391
E+ I+ + RH+N++ I + P++ IV + M L+KL L +
Sbjct: 91 EIKILLRFRHENIIG-INDIIRAPTIEQMKDVYIVQDLMETD-----LYKLLKTQHLSND 144
Query: 392 -LLKVAIDVSKGMNYLHQNNIIHRDLKAANLLMDENEVSLLLSLCLFTVS 440
+ + +G+ Y+H N++HRDLK +NLL++ + L +C F ++
Sbjct: 145 HICYFLYQILRGLKYIHSANVLHRDLKPSNLLLN---TTCDLKICDFGLA 191
>pdb|2X0G|A Chain A, X-ray Structure Of A Dap-kinase Calmodulin Complex
Length = 334
Score = 46.2 bits (108), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 35/139 (25%), Positives = 67/139 (48%), Gaps = 12/139 (8%)
Query: 297 GSKVASGSYGDLY--RGTYCSQDVAIKVLKPERINSDMQ----KEFAQEVFIMRKVRHKN 350
G ++ SG + + R A K +K R S + ++ +EV I+++++H N
Sbjct: 16 GEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPN 75
Query: 351 VVQFIGACTKPPSLCIVTEFMSGGSVYDYLHKLKGVF--KLPSLLKVAIDVSKGMNYLHQ 408
V+ + ++ E ++GG ++D+L + + + + LK ++ G+ YLH
Sbjct: 76 VITLHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEATEFLKQILN---GVYYLHS 132
Query: 409 NNIIHRDLKAAN-LLMDEN 426
I H DLK N +L+D N
Sbjct: 133 LQIAHFDLKPENIMLLDRN 151
>pdb|2Y0A|A Chain A, Structure Of Dapk1 Construct Residues 1-304
Length = 326
Score = 46.2 bits (108), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 35/139 (25%), Positives = 67/139 (48%), Gaps = 12/139 (8%)
Query: 297 GSKVASGSYGDLY--RGTYCSQDVAIKVLKPERINSDMQ----KEFAQEVFIMRKVRHKN 350
G ++ SG + + R A K +K R S + ++ +EV I+++++H N
Sbjct: 16 GEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPN 75
Query: 351 VVQFIGACTKPPSLCIVTEFMSGGSVYDYLHKLKGVF--KLPSLLKVAIDVSKGMNYLHQ 408
V+ + ++ E ++GG ++D+L + + + + LK ++ G+ YLH
Sbjct: 76 VITLHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEATEFLKQILN---GVYYLHS 132
Query: 409 NNIIHRDLKAAN-LLMDEN 426
I H DLK N +L+D N
Sbjct: 133 LQIAHFDLKPENIMLLDRN 151
>pdb|2YAK|A Chain A, Structure Of Death-Associated Protein Kinase 1 (Dapk1) In
Complex With A Ruthenium Octasporine Ligand (Osv)
pdb|2Y4P|A Chain A, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|2Y4P|B Chain B, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|2Y4P|C Chain C, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|2Y4P|D Chain D, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|3ZXT|A Chain A, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
pdb|3ZXT|B Chain B, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
pdb|3ZXT|C Chain C, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
pdb|3ZXT|D Chain D, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
Length = 285
Score = 46.2 bits (108), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 35/139 (25%), Positives = 66/139 (47%), Gaps = 12/139 (8%)
Query: 297 GSKVASGSYGDLY--RGTYCSQDVAIKVLKPERINSDMQ----KEFAQEVFIMRKVRHKN 350
G ++ SG + + R A K +K R S + ++ +EV I+++++H N
Sbjct: 16 GEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPN 75
Query: 351 VVQFIGACTKPPSLCIVTEFMSGGSVYDYLHKLKGVF--KLPSLLKVAIDVSKGMNYLHQ 408
V+ + ++ E ++GG ++D+L + + + + LK + G+ YLH
Sbjct: 76 VITLHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEATEFLK---QILNGVYYLHS 132
Query: 409 NNIIHRDLKAAN-LLMDEN 426
I H DLK N +L+D N
Sbjct: 133 LQIAHFDLKPENIMLLDRN 151
>pdb|2QR7|A Chain A, 2.0a X-Ray Structure Of C-Terminal Kinase Domain Of P90
Ribosomal S6 Kinase 2: Se-Met Derivative
Length = 342
Score = 46.2 bits (108), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 34/139 (24%), Positives = 62/139 (44%), Gaps = 5/139 (3%)
Query: 300 VASGSYGDLYRGTYCSQDVAIKVLKPERINSDMQKEFAQEVFIMRKVRHKNVVQFIGACT 359
+ GSY R + + + V ++ D +E ++R +H N++
Sbjct: 30 IGVGSYSVCKRCIHKATNXEFAVKIIDKSKRDPTEEIE---ILLRYGQHPNIITLKDVYD 86
Query: 360 KPPSLCIVTEFMSGGSVYDYLHKLKGVFKLPSLLKVAIDVSKGMNYLHQNNIIHRDLKAA 419
+ +VTE GG + D + + K F V ++K + YLH ++HRDLK +
Sbjct: 87 DGKYVYVVTELXKGGELLDKILRQK-FFSEREASAVLFTITKTVEYLHAQGVVHRDLKPS 145
Query: 420 NLL-MDENEVSLLLSLCLF 437
N+L +DE+ + +C F
Sbjct: 146 NILYVDESGNPESIRICDF 164
>pdb|2GPH|A Chain A, Docking Motif Interactions In The Map Kinase Erk2
Length = 364
Score = 46.2 bits (108), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 43/170 (25%), Positives = 80/170 (47%), Gaps = 31/170 (18%)
Query: 286 VWEIDPKHLKFGSKVASGSYGDLYRGTYCSQ-------DVAIKVLKPERINSDMQKEFAQ 338
V+++ P++ S + G+YG CS VAIK + P + Q+ +
Sbjct: 22 VFDVGPRYTNL-SYIGEGAYG-----MVCSAYDNLNKVRVAIKKISPFEHQTYCQRTL-R 74
Query: 339 EVFIMRKVRHKNVVQFIGACTKPPSL------CIVTEFMSGGSVYDYLHKLKGVFKLPS- 391
E+ I+ + RH+N++ I + P++ IV + M L+KL L +
Sbjct: 75 EIKILLRFRHENIIG-INDIIRAPTIEQMKDVYIVQDLMETD-----LYKLLKCQHLSND 128
Query: 392 -LLKVAIDVSKGMNYLHQNNIIHRDLKAANLLMDENEVSLLLSLCLFTVS 440
+ + +G+ Y+H N++HRDLK +NLL++ + L +C F ++
Sbjct: 129 HICYFLYQILRGLKYIHSANVLHRDLKPSNLLLN---TTCDLKICDFGLA 175
>pdb|2W4K|A Chain A, X-Ray Structure Of A Dap-Kinase 2-302
Length = 302
Score = 46.2 bits (108), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 35/139 (25%), Positives = 67/139 (48%), Gaps = 12/139 (8%)
Query: 297 GSKVASGSYGDLY--RGTYCSQDVAIKVLKPERINSDMQ----KEFAQEVFIMRKVRHKN 350
G ++ SG + + R A K +K R S + ++ +EV I+++++H N
Sbjct: 16 GEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPN 75
Query: 351 VVQFIGACTKPPSLCIVTEFMSGGSVYDYLHKLKGVF--KLPSLLKVAIDVSKGMNYLHQ 408
V+ + ++ E ++GG ++D+L + + + + LK ++ G+ YLH
Sbjct: 76 VITLHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEATEFLKQILN---GVYYLHS 132
Query: 409 NNIIHRDLKAAN-LLMDEN 426
I H DLK N +L+D N
Sbjct: 133 LQIAHFDLKPENIMLLDRN 151
>pdb|2W4J|A Chain A, X-Ray Structure Of A Dap-Kinase 2-277
Length = 277
Score = 46.2 bits (108), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 35/139 (25%), Positives = 66/139 (47%), Gaps = 12/139 (8%)
Query: 297 GSKVASGSYGDLY--RGTYCSQDVAIKVLKPERINSDMQ----KEFAQEVFIMRKVRHKN 350
G ++ SG + + R A K +K R S + ++ +EV I+++++H N
Sbjct: 16 GEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPN 75
Query: 351 VVQFIGACTKPPSLCIVTEFMSGGSVYDYLHKLKGVF--KLPSLLKVAIDVSKGMNYLHQ 408
V+ + ++ E ++GG ++D+L + + + + LK + G+ YLH
Sbjct: 76 VITLHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEATEFLK---QILNGVYYLHS 132
Query: 409 NNIIHRDLKAAN-LLMDEN 426
I H DLK N +L+D N
Sbjct: 133 LQIAHFDLKPENIMLLDRN 151
>pdb|1WVW|A Chain A, Crystal Structures Of Kinase Domain Of Dap Kinase In
Complex With Small Molecular Inhibitors
pdb|1WVX|A Chain A, Crystal Structures Of Kinase Domain Of Dap Kinase In
Complex With Small Molecular Inhibitors
pdb|1WVY|A Chain A, Crystal Structures Of Kinase Domain Of Dap Kinase In
Complex With Small Molecular Inhibitors
Length = 278
Score = 46.2 bits (108), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 35/139 (25%), Positives = 66/139 (47%), Gaps = 12/139 (8%)
Query: 297 GSKVASGSYGDLY--RGTYCSQDVAIKVLKPERINSDMQ----KEFAQEVFIMRKVRHKN 350
G ++ SG + + R A K +K R S + ++ +EV I+++++H N
Sbjct: 16 GEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPN 75
Query: 351 VVQFIGACTKPPSLCIVTEFMSGGSVYDYLHKLKGVF--KLPSLLKVAIDVSKGMNYLHQ 408
V+ + ++ E ++GG ++D+L + + + + LK + G+ YLH
Sbjct: 76 VITLHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEATEFLK---QILNGVYYLHS 132
Query: 409 NNIIHRDLKAAN-LLMDEN 426
I H DLK N +L+D N
Sbjct: 133 LQIAHFDLKPENIMLLDRN 151
>pdb|3UIU|A Chain A, Crystal Structure Of Apo-Pkr Kinase Domain
pdb|3UIU|B Chain B, Crystal Structure Of Apo-Pkr Kinase Domain
Length = 306
Score = 46.2 bits (108), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 38/163 (23%), Positives = 75/163 (46%), Gaps = 37/163 (22%)
Query: 300 VASGSYGDLYRGTYCSQDVAIKVLKPERINSDMQKEFAQEVFIMRKVRHKNVVQFIGAC- 358
+ SG +G +++ + D V++ + N++ + +EV + K+ H N+V + G
Sbjct: 20 IGSGGFGQVFKAKH-RIDGKTYVIRRVKYNNEKAE---REVKALAKLDHVNIVHYNGCWD 75
Query: 359 ----------------------------TKPPSLCIVTEFMSGGSVYDYLHKLKGVFKLP 390
+K L I EF G++ ++ K +G KL
Sbjct: 76 GFDYDPETSDDSLESSDYDPENSKNSSRSKTKCLFIQMEFCDKGTLEQWIEKRRGE-KLD 134
Query: 391 SLLKVAI--DVSKGMNYLHQNNIIHRDLKAANL-LMDENEVSL 430
+L + + ++KG++Y+H +IHRDLK +N+ L+D +V +
Sbjct: 135 KVLALELFEQITKGVDYIHSKKLIHRDLKPSNIFLVDTKQVKI 177
>pdb|4GV1|A Chain A, Pkb Alpha In Complex With Azd5363
Length = 340
Score = 46.2 bits (108), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 33/131 (25%), Positives = 65/131 (49%), Gaps = 5/131 (3%)
Query: 300 VASGSYGD--LYRGTYCSQDVAIKVLKPERINS-DMQKEFAQEVFIMRKVRHKNVVQFIG 356
+ G++G L + + A+K+LK E I + D E +++ RH +
Sbjct: 16 LGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQNSRHPFLTALKY 75
Query: 357 ACTKPPSLCIVTEFMSGGSVYDYLHKLKGVFKLPSLLKVAIDVSKGMNYLH-QNNIIHRD 415
+ LC V E+ +GG ++ +L + + VF ++ ++YLH + N+++RD
Sbjct: 76 SFQTHDRLCFVMEYANGGELFFHLSRER-VFSEDRARFYGAEIVSALDYLHSEKNVVYRD 134
Query: 416 LKAANLLMDEN 426
LK NL++D++
Sbjct: 135 LKLENLMLDKD 145
>pdb|3GU4|A Chain A, Crystal Structure Of Dapkq23v-Amppnp
pdb|3GU5|A Chain A, Crystal Structure Of Dapkq23v-Amppnp-Mg2+
pdb|3GU6|A Chain A, Crystal Structure Of Dapkq23v-Adp
pdb|3GU7|A Chain A, Crystal Structure Of Dapkq23v-Adp-Mg2+
Length = 295
Score = 46.2 bits (108), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 35/139 (25%), Positives = 67/139 (48%), Gaps = 12/139 (8%)
Query: 297 GSKVASGSYGDLY--RGTYCSQDVAIKVLKPERINSDMQ----KEFAQEVFIMRKVRHKN 350
G ++ SG + + R A K +K R S + ++ +EV I+++++H N
Sbjct: 16 GEELGSGVFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPN 75
Query: 351 VVQFIGACTKPPSLCIVTEFMSGGSVYDYLHKLKGVF--KLPSLLKVAIDVSKGMNYLHQ 408
V+ + ++ E ++GG ++D+L + + + + LK ++ G+ YLH
Sbjct: 76 VITLHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEATEFLKQILN---GVYYLHS 132
Query: 409 NNIIHRDLKAAN-LLMDEN 426
I H DLK N +L+D N
Sbjct: 133 LQIAHFDLKPENIMLLDRN 151
>pdb|3OCB|A Chain A, Akt1 Kinase Domain With Pyrrolopyrimidine Inhibitor
pdb|3OCB|B Chain B, Akt1 Kinase Domain With Pyrrolopyrimidine Inhibitor
pdb|3OW4|A Chain A, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|3OW4|B Chain B, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|3QKK|A Chain A, Spirochromane Akt Inhibitors
pdb|3QKL|A Chain A, Spirochromane Akt Inhibitors
pdb|3QKM|A Chain A, Spirocyclic Sulfonamides As Akt Inhibitors
pdb|4EKK|A Chain A, Akt1 With Amp-Pnp
pdb|4EKK|B Chain B, Akt1 With Amp-Pnp
pdb|4EKL|A Chain A, Akt1 With Gdc0068
Length = 341
Score = 46.2 bits (108), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 33/131 (25%), Positives = 65/131 (49%), Gaps = 5/131 (3%)
Query: 300 VASGSYGD--LYRGTYCSQDVAIKVLKPERINS-DMQKEFAQEVFIMRKVRHKNVVQFIG 356
+ G++G L + + A+K+LK E I + D E +++ RH +
Sbjct: 17 LGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQNSRHPFLTALKY 76
Query: 357 ACTKPPSLCIVTEFMSGGSVYDYLHKLKGVFKLPSLLKVAIDVSKGMNYLH-QNNIIHRD 415
+ LC V E+ +GG ++ +L + + VF ++ ++YLH + N+++RD
Sbjct: 77 SFQTHDRLCFVMEYANGGELFFHLSRER-VFSEDRARFYGAEIVSALDYLHSEKNVVYRD 135
Query: 416 LKAANLLMDEN 426
LK NL++D++
Sbjct: 136 LKLENLMLDKD 146
>pdb|3CQU|A Chain A, Crystal Structure Of Akt-1 Complexed With Substrate
Peptide And Inhibitor
pdb|3CQW|A Chain A, Crystal Structure Of Akt-1 Complexed With Substrate
Peptide And Inhibitor
pdb|3MV5|A Chain A, Crystal Structure Of Akt-1-Inhibitor Complexes
pdb|3MVH|A Chain A, Crystal Structure Of Akt-1-Inhibitor Complexes
Length = 342
Score = 46.2 bits (108), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 33/131 (25%), Positives = 65/131 (49%), Gaps = 5/131 (3%)
Query: 300 VASGSYGD--LYRGTYCSQDVAIKVLKPERINS-DMQKEFAQEVFIMRKVRHKNVVQFIG 356
+ G++G L + + A+K+LK E I + D E +++ RH +
Sbjct: 18 LGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQNSRHPFLTALKY 77
Query: 357 ACTKPPSLCIVTEFMSGGSVYDYLHKLKGVFKLPSLLKVAIDVSKGMNYLH-QNNIIHRD 415
+ LC V E+ +GG ++ +L + + VF ++ ++YLH + N+++RD
Sbjct: 78 SFQTHDRLCFVMEYANGGELFFHLSRER-VFSEDRARFYGAEIVSALDYLHSEKNVVYRD 136
Query: 416 LKAANLLMDEN 426
LK NL++D++
Sbjct: 137 LKLENLMLDKD 147
>pdb|1Q24|A Chain A, Pka Double Mutant Model Of Pkb In Complex With Mgatp
pdb|1Q62|A Chain A, Pka Double Mutant Model Of Pkb
Length = 350
Score = 46.2 bits (108), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 34/130 (26%), Positives = 63/130 (48%), Gaps = 4/130 (3%)
Query: 300 VASGSYGD--LYRGTYCSQDVAIKVLKPERINSDMQKEFA-QEVFIMRKVRHKNVVQFIG 356
+ +GS+G L + A+K+L +++ Q E E I++ V +V+
Sbjct: 49 LGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEF 108
Query: 357 ACTKPPSLCIVTEFMSGGSVYDYLHKLKGVFKLPSLLKVAIDVSKGMNYLHQNNIIHRDL 416
+ +L +V E+ GG ++ +L ++ G F P A + YLH ++I+RDL
Sbjct: 109 SFKDNSNLYMVMEYAPGGEMFSHLRRI-GRFSEPHARFYAAQIVLTFEYLHSLDLIYRDL 167
Query: 417 KAANLLMDEN 426
K NL++D+
Sbjct: 168 KPENLMIDQQ 177
>pdb|3SA0|A Chain A, Complex Of Erk2 With Norathyriol
pdb|4FUY|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek2
pdb|4FV0|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek3
Length = 360
Score = 45.8 bits (107), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 40/154 (25%), Positives = 73/154 (47%), Gaps = 28/154 (18%)
Query: 286 VWEIDPKHLKFGSKVASGSYGDLYRGTYCSQ-------DVAIKVLKPERINSDMQKEFAQ 338
V+++ P++ S + G+YG CS VAIK + P + Q+ +
Sbjct: 18 VFDVGPRYTNL-SYIGEGAYG-----MVCSAYDNVNKVRVAIKKISPFEHQTYCQRTL-R 70
Query: 339 EVFIMRKVRHKNVVQFIGACTKPPSL------CIVTEFMSGGSVYDYLHKLKGVFKLPS- 391
E+ I+ + RH+N++ I + P++ IV + M L+KL L +
Sbjct: 71 EIKILLRFRHENIIG-INDIIRAPTIEQMKDVYIVQDLMETD-----LYKLLKTQHLSND 124
Query: 392 -LLKVAIDVSKGMNYLHQNNIIHRDLKAANLLMD 424
+ + +G+ Y+H N++HRDLK +NLL++
Sbjct: 125 HICYFLYQILRGLKYIHSANVLHRDLKPSNLLLN 158
>pdb|1Q61|A Chain A, Pka Triple Mutant Model Of Pkb
Length = 350
Score = 45.8 bits (107), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 34/130 (26%), Positives = 63/130 (48%), Gaps = 4/130 (3%)
Query: 300 VASGSYGD--LYRGTYCSQDVAIKVLKPERINSDMQKEFA-QEVFIMRKVRHKNVVQFIG 356
+ +GS+G L + A+K+L +++ Q E E I++ V +V+
Sbjct: 49 LGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEF 108
Query: 357 ACTKPPSLCIVTEFMSGGSVYDYLHKLKGVFKLPSLLKVAIDVSKGMNYLHQNNIIHRDL 416
+ +L +V E+ GG ++ +L ++ G F P A + YLH ++I+RDL
Sbjct: 109 SFKDNSNLYMVMEYAPGGEMFSHLRRI-GRFSEPHARFYAAQIVLTFEYLHSLDLIYRDL 167
Query: 417 KAANLLMDEN 426
K NL++D+
Sbjct: 168 KPENLMIDQQ 177
>pdb|1PHK|A Chain A, Two Structures Of The Catalytic Domain Of Phosphorylase,
Kinase: An Active Protein Kinase Complexed With
Nucleotide, Substrate-Analogue And Product
Length = 298
Score = 45.8 bits (107), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 29/97 (29%), Positives = 52/97 (53%), Gaps = 2/97 (2%)
Query: 331 DMQKEFAQEVFIMRKVR-HKNVVQFIGACTKPPSLCIVTEFMSGGSVYDYLHKLKGVFKL 389
++++ +EV I+RKV H N++Q +V + M G ++DYL + K
Sbjct: 65 ELREATLKEVDILRKVSGHPNIIQLKDTYETNTFFFLVFDLMKKGELFDYLTE-KVTLSE 123
Query: 390 PSLLKVAIDVSKGMNYLHQNNIIHRDLKAANLLMDEN 426
K+ + + + LH+ NI+HRDLK N+L+D++
Sbjct: 124 KETRKIMRALLEVICALHKLNIVHRDLKPENILLDDD 160
>pdb|1SZM|A Chain A, Dual Binding Mode Of Bisindolylmaleimide 2 To Protein
Kinase A (Pka)
pdb|1SZM|B Chain B, Dual Binding Mode Of Bisindolylmaleimide 2 To Protein
Kinase A (Pka)
Length = 350
Score = 45.8 bits (107), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 34/130 (26%), Positives = 63/130 (48%), Gaps = 4/130 (3%)
Query: 300 VASGSYGD--LYRGTYCSQDVAIKVLKPERINSDMQKEFA-QEVFIMRKVRHKNVVQFIG 356
+ +GS+G L + A+K+L +++ Q E E I++ V +V+
Sbjct: 49 LGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEF 108
Query: 357 ACTKPPSLCIVTEFMSGGSVYDYLHKLKGVFKLPSLLKVAIDVSKGMNYLHQNNIIHRDL 416
+ +L +V E+ GG ++ +L ++ G F P A + YLH ++I+RDL
Sbjct: 109 SFKDNSNLYMVMEYAPGGEMFSHLRRI-GRFXEPHARFYAAQIVLTFEYLHSLDLIYRDL 167
Query: 417 KAANLLMDEN 426
K NL++D+
Sbjct: 168 KPENLMIDQQ 177
>pdb|3L9M|A Chain A, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a,
L173m, Q181k) With Compound 18
pdb|3L9M|B Chain B, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a,
L173m, Q181k) With Compound 18
pdb|3L9N|A Chain A, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a,
L173m, Q181k) With Compound 27
Length = 351
Score = 45.8 bits (107), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 34/130 (26%), Positives = 63/130 (48%), Gaps = 4/130 (3%)
Query: 300 VASGSYGD--LYRGTYCSQDVAIKVLKPERINSDMQKEFA-QEVFIMRKVRHKNVVQFIG 356
+ +GS+G L + A+K+L +++ Q E E I++ V +V+
Sbjct: 50 LGTGSFGRVMLVKHKETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEF 109
Query: 357 ACTKPPSLCIVTEFMSGGSVYDYLHKLKGVFKLPSLLKVAIDVSKGMNYLHQNNIIHRDL 416
+ +L +V E+ GG ++ +L ++ G F P A + YLH ++I+RDL
Sbjct: 110 SFKDNSNLYMVMEYAPGGEMFSHLRRI-GRFSEPHARFYAAQIVLTFEYLHSLDLIYRDL 168
Query: 417 KAANLLMDEN 426
K NL++D+
Sbjct: 169 KPENLMIDQQ 178
>pdb|3N9X|A Chain A, Crystal Structure Of Map Kinase From Plasmodium Berghei,
Pb000659.00.0
pdb|3N9X|B Chain B, Crystal Structure Of Map Kinase From Plasmodium Berghei,
Pb000659.00.0
Length = 432
Score = 45.8 bits (107), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 34/135 (25%), Positives = 64/135 (47%), Gaps = 11/135 (8%)
Query: 300 VASGSYGDLYRGTYCSQDVAIKVLKPERINSDMQ--KEFAQEVFIMRKVRHKNVVQFIGA 357
+ GSYG +Y + + + + K R+ D+ K +E+ I+ +++ +++
Sbjct: 34 IGRGSYGYVYLAYDKNTEKNVAIKKVNRMFEDLIDCKRILREITILNRLKSDYIIRLYDL 93
Query: 358 CTKPPSLCIVTEFMSGGSVYDYLHKLKGVFKLPSLLK------VAIDVSKGMNYLHQNNI 411
P L E + D LK +FK P L + ++ G N++H++ I
Sbjct: 94 II-PDDLLKFDELYIVLEIAD--SDLKKLFKTPIFLTEEHIKTILYNLLLGENFIHESGI 150
Query: 412 IHRDLKAANLLMDEN 426
IHRDLK AN L++++
Sbjct: 151 IHRDLKPANCLLNQD 165
>pdb|4HNI|A Chain A, Crystal Structure Of Ck1e In Complex With Pf4800567
pdb|4HNI|B Chain B, Crystal Structure Of Ck1e In Complex With Pf4800567
pdb|4HOK|A Chain A, Crystal Structure Of Apo Ck1e
pdb|4HOK|C Chain C, Crystal Structure Of Apo Ck1e
pdb|4HOK|E Chain E, Crystal Structure Of Apo Ck1e
pdb|4HOK|G Chain G, Crystal Structure Of Apo Ck1e
pdb|4HOK|I Chain I, Crystal Structure Of Apo Ck1e
pdb|4HOK|K Chain K, Crystal Structure Of Apo Ck1e
pdb|4HOK|M Chain M, Crystal Structure Of Apo Ck1e
pdb|4HOK|O Chain O, Crystal Structure Of Apo Ck1e
pdb|4HOK|Q Chain Q, Crystal Structure Of Apo Ck1e
pdb|4HOK|S Chain S, Crystal Structure Of Apo Ck1e
pdb|4HOK|U Chain U, Crystal Structure Of Apo Ck1e
pdb|4HOK|W Chain W, Crystal Structure Of Apo Ck1e
Length = 296
Score = 45.8 bits (107), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 37/134 (27%), Positives = 64/134 (47%), Gaps = 12/134 (8%)
Query: 295 KFGSKVASGSYGDLYRGTYCS--QDVAIKV--LKPERINSDMQKEFAQEVFIMRKVRHKN 350
+ G K+ SGS+GD+Y G + ++VAIK+ +K + ++ +F K+
Sbjct: 12 RLGRKIGSGSFGDIYLGANIASGEEVAIKLECVKTKHPQLHIESKFY-------KMMQGG 64
Query: 351 V-VQFIGACTKPPSLCIVTEFMSGGSVYDYLHKLKGVFKLPSLLKVAIDVSKGMNYLHQN 409
V + I C ++ + G S+ D + F L ++L +A + + Y+H
Sbjct: 65 VGIPSIKWCGAEGDYNVMVMELLGPSLEDLFNFCSRKFSLKTVLLLADQMISRIEYIHSK 124
Query: 410 NIIHRDLKAANLLM 423
N IHRD+K N LM
Sbjct: 125 NFIHRDVKPDNFLM 138
>pdb|1QL6|A Chain A, The Catalytic Mechanism Of Phosphorylase Kinase Probed By
Mutational Studies
Length = 298
Score = 45.8 bits (107), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 29/97 (29%), Positives = 52/97 (53%), Gaps = 2/97 (2%)
Query: 331 DMQKEFAQEVFIMRKVR-HKNVVQFIGACTKPPSLCIVTEFMSGGSVYDYLHKLKGVFKL 389
++++ +EV I+RKV H N++Q +V + M G ++DYL + K
Sbjct: 65 ELREATLKEVDILRKVSGHPNIIQLKDTYETNTFFFLVFDLMKKGELFDYLTE-KVTLSE 123
Query: 390 PSLLKVAIDVSKGMNYLHQNNIIHRDLKAANLLMDEN 426
K+ + + + LH+ NI+HRDLK N+L+D++
Sbjct: 124 KETRKIMRALLEVICALHKLNIVHRDLKPENILLDDD 160
>pdb|2PHK|A Chain A, The Crystal Structure Of A Phosphorylase Kinase Peptide
Substrate Complex: Kinase Substrate Recognition
Length = 277
Score = 45.8 bits (107), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 29/97 (29%), Positives = 52/97 (53%), Gaps = 2/97 (2%)
Query: 331 DMQKEFAQEVFIMRKVR-HKNVVQFIGACTKPPSLCIVTEFMSGGSVYDYLHKLKGVFKL 389
++++ +EV I+RKV H N++Q +V + M G ++DYL + K
Sbjct: 52 ELREATLKEVDILRKVSGHPNIIQLKDTYETNTFFFLVFDLMKKGELFDYLTE-KVTLSE 110
Query: 390 PSLLKVAIDVSKGMNYLHQNNIIHRDLKAANLLMDEN 426
K+ + + + LH+ NI+HRDLK N+L+D++
Sbjct: 111 KETRKIMRALLEVICALHKLNIVHRDLKPENILLDDD 147
>pdb|1GOL|A Chain A, Coordinates Of Rat Map Kinase Erk2 With An Arginine
Mutation At Position 52
Length = 364
Score = 45.8 bits (107), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 42/170 (24%), Positives = 80/170 (47%), Gaps = 31/170 (18%)
Query: 286 VWEIDPKHLKFGSKVASGSYGDLYRGTYCSQ-------DVAIKVLKPERINSDMQKEFAQ 338
V+++ P++ S + G+YG CS VAI+ + P + Q+ +
Sbjct: 22 VFDVGPRYTNL-SYIGEGAYG-----MVCSAYDNLNKVRVAIRKISPFEHQTYCQRTL-R 74
Query: 339 EVFIMRKVRHKNVVQFIGACTKPPSL------CIVTEFMSGGSVYDYLHKLKGVFKLPS- 391
E+ I+ + RH+N++ I + P++ IV + M L+KL L +
Sbjct: 75 EIKILLRFRHENIIG-INDIIRAPTIEQMKDVYIVQDLMETD-----LYKLLKTQHLSND 128
Query: 392 -LLKVAIDVSKGMNYLHQNNIIHRDLKAANLLMDENEVSLLLSLCLFTVS 440
+ + +G+ Y+H N++HRDLK +NLL++ + L +C F ++
Sbjct: 129 HICYFLYQILRGLKYIHSANVLHRDLKPSNLLLN---TTCDLKICDFGLA 175
>pdb|3AMA|A Chain A, Protein Kinase A Sixfold Mutant Model Of Aurora B With
Inhibitor Jnj- 7706621
pdb|3AMB|A Chain A, Protein Kinase A Sixfold Mutant Model Of Aurora B With
Inhibitor Vx- 680
Length = 351
Score = 45.4 bits (106), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 35/130 (26%), Positives = 62/130 (47%), Gaps = 4/130 (3%)
Query: 300 VASGSYGD--LYRGTYCSQDVAIKVLKPERINSDMQKEFA-QEVFIMRKVRHKNVVQFIG 356
+ +GS+G L + A+K+L +++ Q E E I + V +V+
Sbjct: 50 LGTGSFGRVMLVKHKETGNHYAMKILDKQKVVKLKQIEHTLNEKRIQQAVNFPFLVKLEF 109
Query: 357 ACTKPPSLCIVTEFMSGGSVYDYLHKLKGVFKLPSLLKVAIDVSKGMNYLHQNNIIHRDL 416
+ +L +V E+ GG ++ +L ++ G F P A + YLH ++I+RDL
Sbjct: 110 SFKDNSNLYMVLEYAPGGEMFSHLRRI-GRFSEPHARFYAAQIVLTFEYLHSLDLIYRDL 168
Query: 417 KAANLLMDEN 426
K NLL+D+
Sbjct: 169 KPENLLIDQQ 178
>pdb|4DN5|A Chain A, Crystal Structure Of Nf-kb-inducing Kinase (nik)
pdb|4DN5|B Chain B, Crystal Structure Of Nf-kb-inducing Kinase (nik)
Length = 356
Score = 45.4 bits (106), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 40/163 (24%), Positives = 74/163 (45%), Gaps = 24/163 (14%)
Query: 299 KVASGSYGDLYR------GTYCS-QDVAIKVLKPERINSDMQKEFAQEVFIMRKVRHKNV 351
++ GS+G+++R G C+ + V ++V + A+E+ + +
Sbjct: 81 RLGRGSFGEVHRMEDKQTGFQCAVKKVRLEVFR------------AEELMACAGLTSPRI 128
Query: 352 VQFIGACTKPPSLCIVTEFMSGGSVYDYLHKLKGVFKLPSLLKVAIDVSKGMNYLHQNNI 411
V GA + P + I E + GGS+ L K +G L +G+ YLH I
Sbjct: 129 VPLYGAVREGPWVNIFMELLEGGSL-GQLVKEQGCLPEDRALYYLGQALEGLEYLHSRRI 187
Query: 412 IHRDLKAANLLMDENEVSLLLSLCLFTVSILFC--GKGRELIS 452
+H D+KA N+L+ + +LC F ++ G G++L++
Sbjct: 188 LHGDVKADNVLLSSDGSH--AALCDFGHAVCLQPDGLGKDLLT 228
>pdb|1CM8|A Chain A, Phosphorylated Map Kinase P38-Gamma
pdb|1CM8|B Chain B, Phosphorylated Map Kinase P38-Gamma
Length = 367
Score = 45.4 bits (106), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 38/135 (28%), Positives = 62/135 (45%), Gaps = 11/135 (8%)
Query: 300 VASGSYGDLYRGT--YCSQDVAIKVLKPERINSDMQKEFAQEVFIMRKVRHKNVVQFIGA 357
V SG+YG + VAIK L + K +E+ +++ +RH+NV+ +
Sbjct: 33 VGSGAYGAVCSAVDGRTGAKVAIKKLYRPFQSELFAKRAYRELRLLKHMRHENVIGLLDV 92
Query: 358 CTKPPSL------CIVTEFMSGGSVYDYLHKLKGVFKLPSLLKVAIDVSKGMNYLHQNNI 411
T +L +V FM H+ G ++ L+ + KG+ Y+H I
Sbjct: 93 FTPDETLDDFTDFYLVMPFMGTDLGKLMKHEKLGEDRIQFLV---YQMLKGLRYIHAAGI 149
Query: 412 IHRDLKAANLLMDEN 426
IHRDLK NL ++E+
Sbjct: 150 IHRDLKPGNLAVNED 164
>pdb|3DB6|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 902
pdb|3D5X|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Wortmannin.
pdb|3DBE|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 557
pdb|3DBF|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 562
Length = 301
Score = 45.4 bits (106), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 39/144 (27%), Positives = 65/144 (45%), Gaps = 7/144 (4%)
Query: 289 IDPKHLKF---GSKVASGSYGDLYRGTY--CSQDVAIKVLKPERINSDMQKE-FAQEVFI 342
+DP+ +K G + G + Y T + A KV+ + QKE + E+ I
Sbjct: 20 VDPRTMKRYMRGRFLGKGGFAKCYEITDMDTKEVFAGKVVPKSMLLKPHQKEKMSTEIAI 79
Query: 343 MRKVRHKNVVQFIGACTKPPSLCIVTEFMSGGSVYDYLHKLKGVFKLPSLLKVAIDVSKG 402
+ + + +VV F G + +V E S+ + LHK + P +G
Sbjct: 80 HKSLDNPHVVGFHGFFEDDDFVYVVLEICRRRSLLE-LHKRRKAVTEPEARYFMRQTIQG 138
Query: 403 MNYLHQNNIIHRDLKAANLLMDEN 426
+ YLH N +IHRDLK NL ++++
Sbjct: 139 VQYLHNNRVIHRDLKLGNLFLNDD 162
>pdb|1Z57|A Chain A, Crystal Structure Of Human Clk1 In Complex With
10z-Hymenialdisine
Length = 339
Score = 45.4 bits (106), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 25/68 (36%), Positives = 41/68 (60%), Gaps = 4/68 (5%)
Query: 364 LCIVTEFMSGGSVYDYLHKLKGV--FKLPSLLKVAIDVSKGMNYLHQNNIIHRDLKAANL 421
+CIV E + G S YD++ K G F+L + K+A + K +N+LH N + H DLK N+
Sbjct: 92 ICIVFELL-GLSTYDFI-KENGFLPFRLDHIRKMAYQICKSVNFLHSNKLTHTDLKPENI 149
Query: 422 LMDENEVS 429
L +++ +
Sbjct: 150 LFVQSDYT 157
>pdb|3TEI|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4H3P|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4H3P|D Chain D, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 45.4 bits (106), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 43/170 (25%), Positives = 79/170 (46%), Gaps = 31/170 (18%)
Query: 286 VWEIDPKHLKFGSKVASGSYGDLYRGTYCSQ-------DVAIKVLKPERINSDMQKEFAQ 338
V+++ P++ S + G+YG CS VAIK + P + Q+ +
Sbjct: 20 VFDVGPRYTNL-SYIGEGAYG-----MVCSAYDNVNKVRVAIKKISPFEHQTYCQRTL-R 72
Query: 339 EVFIMRKVRHKNVVQFIGACTKPPSL------CIVTEFMSGGSVYDYLHKLKGVFKLPS- 391
E+ I+ RH+N++ I + P++ IV + M L+KL L +
Sbjct: 73 EIKILLAFRHENIIG-INDIIRAPTIEQMKDVYIVQDLMETD-----LYKLLKTQHLSND 126
Query: 392 -LLKVAIDVSKGMNYLHQNNIIHRDLKAANLLMDENEVSLLLSLCLFTVS 440
+ + +G+ Y+H N++HRDLK +NLL++ + L +C F ++
Sbjct: 127 HICYFLYQILRGLKYIHSANVLHRDLKPSNLLLN---TTCDLKICDFGLA 173
>pdb|2VAG|A Chain A, Crystal Structure Of Di-Phosphorylated Human Clk1 In
Complex With A Novel Substituted Indole Inhibitor
Length = 339
Score = 45.1 bits (105), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 25/68 (36%), Positives = 41/68 (60%), Gaps = 4/68 (5%)
Query: 364 LCIVTEFMSGGSVYDYLHKLKGV--FKLPSLLKVAIDVSKGMNYLHQNNIIHRDLKAANL 421
+CIV E + G S YD++ K G F+L + K+A + K +N+LH N + H DLK N+
Sbjct: 92 ICIVFELL-GLSTYDFI-KENGFLPFRLDHIRKMAYQICKSVNFLHSNKLTHTDLKPENI 149
Query: 422 LMDENEVS 429
L +++ +
Sbjct: 150 LFVQSDYT 157
>pdb|3D5V|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain.
pdb|3DB8|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 041
pdb|3DBC|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 257
pdb|3DBD|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 094
Length = 317
Score = 45.1 bits (105), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 39/144 (27%), Positives = 65/144 (45%), Gaps = 7/144 (4%)
Query: 289 IDPKHLKF---GSKVASGSYGDLYRGTY--CSQDVAIKVLKPERINSDMQKE-FAQEVFI 342
+DP+ +K G + G + Y T + A KV+ + QKE + E+ I
Sbjct: 36 VDPRTMKRYMRGRFLGKGGFAKCYEITDMDTKEVFAGKVVPKSMLLKPHQKEKMSTEIAI 95
Query: 343 MRKVRHKNVVQFIGACTKPPSLCIVTEFMSGGSVYDYLHKLKGVFKLPSLLKVAIDVSKG 402
+ + + +VV F G + +V E S+ + LHK + P +G
Sbjct: 96 HKSLDNPHVVGFHGFFEDDDFVYVVLEICRRRSLLE-LHKRRKAVTEPEARYFMRQTIQG 154
Query: 403 MNYLHQNNIIHRDLKAANLLMDEN 426
+ YLH N +IHRDLK NL ++++
Sbjct: 155 VQYLHNNRVIHRDLKLGNLFLNDD 178
>pdb|3D5U|A Chain A, Crystal Structure Of A Wildtype Polo-Like Kinase 1 (Plk1)
Catalytic Domain
Length = 317
Score = 45.1 bits (105), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 39/144 (27%), Positives = 65/144 (45%), Gaps = 7/144 (4%)
Query: 289 IDPKHLKF---GSKVASGSYGDLYRGTY--CSQDVAIKVLKPERINSDMQKE-FAQEVFI 342
+DP+ +K G + G + Y T + A KV+ + QKE + E+ I
Sbjct: 36 VDPRTMKRYMRGRFLGKGGFAKCYEITDMDTKEVFAGKVVPKSMLLKPHQKEKMSTEIAI 95
Query: 343 MRKVRHKNVVQFIGACTKPPSLCIVTEFMSGGSVYDYLHKLKGVFKLPSLLKVAIDVSKG 402
+ + + +VV F G + +V E S+ + LHK + P +G
Sbjct: 96 HKSLDNPHVVGFHGFFEDDDFVYVVLEICRRRSLLE-LHKRRKAVTEPEARYFMRQTIQG 154
Query: 403 MNYLHQNNIIHRDLKAANLLMDEN 426
+ YLH N +IHRDLK NL ++++
Sbjct: 155 VQYLHNNRVIHRDLKLGNLFLNDD 178
>pdb|3D5W|A Chain A, Crystal Structure Of A Phosphorylated Polo-Like Kinase 1
(Plk1) Catalytic Domain In Complex With Adp
Length = 317
Score = 45.1 bits (105), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 39/144 (27%), Positives = 65/144 (45%), Gaps = 7/144 (4%)
Query: 289 IDPKHLKF---GSKVASGSYGDLYRGTY--CSQDVAIKVLKPERINSDMQKE-FAQEVFI 342
+DP+ +K G + G + Y T + A KV+ + QKE + E+ I
Sbjct: 36 VDPRTMKRYMRGRFLGKGGFAKCYEITDMDTKEVFAGKVVPKSMLLKPHQKEKMSTEIAI 95
Query: 343 MRKVRHKNVVQFIGACTKPPSLCIVTEFMSGGSVYDYLHKLKGVFKLPSLLKVAIDVSKG 402
+ + + +VV F G + +V E S+ + LHK + P +G
Sbjct: 96 HKSLDNPHVVGFHGFFEDDDFVYVVLEICRRRSLLE-LHKRRKAVTEPEARYFMRQTIQG 154
Query: 403 MNYLHQNNIIHRDLKAANLLMDEN 426
+ YLH N +IHRDLK NL ++++
Sbjct: 155 VQYLHNNRVIHRDLKLGNLFLNDD 178
>pdb|2HW6|A Chain A, Crystal Structure Of Mnk1 Catalytic Domain
pdb|2HW6|B Chain B, Crystal Structure Of Mnk1 Catalytic Domain
Length = 307
Score = 45.1 bits (105), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 32/124 (25%), Positives = 63/124 (50%), Gaps = 4/124 (3%)
Query: 315 SQDVAIKVLKPERINSDMQKEFAQEVFIMRKVR-HKNVVQFIGACTKPPSLCIVTEFMSG 373
++ A+K+++ + +S + +EV + + + +KN+++ I +V E + G
Sbjct: 38 GKEYAVKIIEKQAGHS--RSRVFREVETLYQCQGNKNILELIEFFEDDTRFYLVFEKLQG 95
Query: 374 GSVYDYLHKLKGVFKLPSLLKVAIDVSKGMNYLHQNNIIHRDLKAANLLMDENEVSLLLS 433
GS+ ++ K K F +V DV+ +++LH I HRDLK N+L + E +
Sbjct: 96 GSILAHIQKQKH-FNEREASRVVRDVAAALDFLHTKGIAHRDLKPENILCESPEKVSPVK 154
Query: 434 LCLF 437
+C F
Sbjct: 155 ICDF 158
>pdb|4H3Q|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 45.1 bits (105), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 43/170 (25%), Positives = 78/170 (45%), Gaps = 31/170 (18%)
Query: 286 VWEIDPKHLKFGSKVASGSYGDLYRGTYCSQ-------DVAIKVLKPERINSDMQKEFAQ 338
V+++ P++ S + G+YG CS VAIK + P + Q+ +
Sbjct: 20 VFDVGPRYTNL-SYIGEGAYG-----MVCSAYDNVNKVRVAIKKISPFEHQTYCQRTL-R 72
Query: 339 EVFIMRKVRHKNVVQFIGACTKPPSL------CIVTEFMSGGSVYDYLHKLKGVFKLPS- 391
E+ I+ RH+N++ I + P++ IV + M L+KL L +
Sbjct: 73 EIKILLAFRHENIIG-INDIIRAPTIEQMKDVYIVQDLMETD-----LYKLLKTQHLSND 126
Query: 392 -LLKVAIDVSKGMNYLHQNNIIHRDLKAANLLMDENEVSLLLSLCLFTVS 440
+ + +G+ Y+H N++HRDLK +NLL++ L +C F ++
Sbjct: 127 HICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTSD---LKICDFGLA 173
>pdb|4G3D|A Chain A, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
pdb|4G3D|B Chain B, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
pdb|4G3D|D Chain D, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
pdb|4G3D|E Chain E, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
Length = 371
Score = 45.1 bits (105), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 40/163 (24%), Positives = 73/163 (44%), Gaps = 24/163 (14%)
Query: 299 KVASGSYGDLYR------GTYCS-QDVAIKVLKPERINSDMQKEFAQEVFIMRKVRHKNV 351
++ GS+G+++R G C+ + V ++V + A+E+ + +
Sbjct: 100 RLGRGSFGEVHRMEDKQTGFQCAVKKVRLEVFR------------AEELMACAGLTSPRI 147
Query: 352 VQFIGACTKPPSLCIVTEFMSGGSVYDYLHKLKGVFKLPSLLKVAIDVSKGMNYLHQNNI 411
V GA + P + I E + GGS+ L K +G L +G+ YLH I
Sbjct: 148 VPLYGAVREGPWVNIFMELLEGGSL-GQLVKEQGCLPEDRALYYLGQALEGLEYLHSRRI 206
Query: 412 IHRDLKAANLLMDENEVSLLLSLCLFTVSILFC--GKGRELIS 452
+H D+KA N+L+ + +LC F ++ G G+ L++
Sbjct: 207 LHGDVKADNVLLSSDGSH--AALCDFGHAVCLQPDGLGKSLLT 247
>pdb|3HKO|A Chain A, Crystal Structure Of A Cdpk Kinase Domain From
Cryptosporidium Parvum, Cgd7_40
Length = 345
Score = 44.7 bits (104), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 54/211 (25%), Positives = 79/211 (37%), Gaps = 58/211 (27%)
Query: 283 GTDVWEIDPK-HLKFGSKVASGSYGDLYRGTYCSQDVAIKVLKP------ERINSDMQKE 335
G + E+ K HLK + GSYG + R +Q AI+ +K +IN +
Sbjct: 18 GGSLLELQKKYHLK--GAIGQGSYG-VVRVAIENQTRAIRAIKIMNKNKIRQINPKDVER 74
Query: 336 FAQEVFIMRKVRHKNVVQFIGACTKPPSLCIVTEFMSGGSVYDYLHKLKGVFKLPSLLKV 395
EV +M+K+ H N+ + +C+V E GG + D L+ VF S K
Sbjct: 75 IKTEVRLMKKLHHPNIARLYEVYEDEQYICLVMELCHGGHLLDKLN----VFIDDSTGKC 130
Query: 396 AIDVSK-------------------------------------------GMNYLHQNNII 412
A+DV K ++YLH I
Sbjct: 131 AMDVVKTQICPCPECNEEAINGSIHGFRESLDFVQREKLISNIMRQIFSALHYLHNQGIC 190
Query: 413 HRDLKAANLLMDENEVSLLLSLCLFTVSILF 443
HRD+K N L N+ S + L F +S F
Sbjct: 191 HRDIKPENFLFSTNK-SFEIKLVDFGLSKEF 220
>pdb|1SMH|A Chain A, Protein Kinase A Variant Complex With Completely Ordered
N- Terminal Helix
pdb|1XHA|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 44.7 bits (104), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 33/130 (25%), Positives = 63/130 (48%), Gaps = 4/130 (3%)
Query: 300 VASGSYGD--LYRGTYCSQDVAIKVLKPERINSDMQKEFA-QEVFIMRKVRHKNVVQFIG 356
+ +GS+G L + A+K+L +++ + E E I++ V +V+
Sbjct: 49 LGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKEIEHTLNEKRILQAVNFPFLVKLEF 108
Query: 357 ACTKPPSLCIVTEFMSGGSVYDYLHKLKGVFKLPSLLKVAIDVSKGMNYLHQNNIIHRDL 416
+ +L +V E+ GG ++ +L ++ G F P A + YLH ++I+RDL
Sbjct: 109 SFKDNSNLYMVMEYAPGGEMFSHLRRI-GRFSEPHARFYAAQIVLTFEYLHSLDLIYRDL 167
Query: 417 KAANLLMDEN 426
K NL++D+
Sbjct: 168 KPENLMIDQQ 177
>pdb|1XH9|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 44.7 bits (104), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 33/130 (25%), Positives = 63/130 (48%), Gaps = 4/130 (3%)
Query: 300 VASGSYGD--LYRGTYCSQDVAIKVLKPERINSDMQKEFA-QEVFIMRKVRHKNVVQFIG 356
+ +GS+G L + A+K+L +++ + E E I++ V +V+
Sbjct: 49 LGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKEIEHTLNEKRILQAVNFPFLVKLEF 108
Query: 357 ACTKPPSLCIVTEFMSGGSVYDYLHKLKGVFKLPSLLKVAIDVSKGMNYLHQNNIIHRDL 416
+ +L +V E+ GG ++ +L ++ G F P A + YLH ++I+RDL
Sbjct: 109 SFKDNSNLYMVMEYAPGGEMFSHLRRI-GRFSEPHARFYAAQIVLTFEYLHSLDLIYRDL 167
Query: 417 KAANLLMDEN 426
K NL++D+
Sbjct: 168 KPENLMIDQQ 177
>pdb|3G2F|A Chain A, Crystal Structure Of The Kinase Domain Of Bone
Morphogenetic Protein Receptor Type Ii (Bmpr2) At 2.35 A
Resolution
pdb|3G2F|B Chain B, Crystal Structure Of The Kinase Domain Of Bone
Morphogenetic Protein Receptor Type Ii (Bmpr2) At 2.35 A
Resolution
Length = 336
Score = 44.7 bits (104), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 42/153 (27%), Positives = 68/153 (44%), Gaps = 27/153 (17%)
Query: 289 IDPKHLKFGSKVASGSYGDLYRGTYCSQDVAIKVLKPERINSDMQKEFAQEVFIMRK--V 346
+D +LK + G YG +Y+G+ + VA+KV ++ F E I R +
Sbjct: 10 LDLDNLKLLELIGRGRYGAVYKGSLDERPVAVKVFSFAN-----RQNFINEKNIYRVPLM 64
Query: 347 RHKNVVQFIGACTKPPS-----LCIVTEFMSGGSVYDY--LHKLKGVFKLPSLLKVAIDV 399
H N+ +FI + + +V E+ GS+ Y LH V S ++A V
Sbjct: 65 EHDNIARFIVGDERVTADGRMEYLLVMEYYPNGSLXKYLSLHTSDWV----SSCRLAHSV 120
Query: 400 SKGMNYLHQN---------NIIHRDLKAANLLM 423
++G+ YLH I HRDL + N+L+
Sbjct: 121 TRGLAYLHTELPRGDHYKPAISHRDLNSRNVLV 153
>pdb|2JDT|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
Isoquinoline-5- Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl) Amide
pdb|2JDV|A Chain A, Structure Of Pka-Pkb Chimera Complexed With A-443654
pdb|2UVX|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 7-Azaindole
pdb|2UW4|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
2-(4-(5-Methyl- 1h-Pyrazol-4-Yl)-Phenyl)-Ethylamine
pdb|2UW7|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 4-(4-Chloro-
Phenyl)-4-(4-(1h-Pyrazol-4-Yl)-Phenyl)-Piperidine
pdb|4AXA|A Chain A, Structure Of Pka-pkb Chimera Complexed With
(1s)-2-amino-1-(
4-chlorophenyl)-1-(4-(1h-pyrazol-4-yl)phenyl)ethan-1-ol
Length = 351
Score = 44.3 bits (103), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 33/130 (25%), Positives = 62/130 (47%), Gaps = 4/130 (3%)
Query: 300 VASGSYGD--LYRGTYCSQDVAIKVLKPERINSDMQKEFA-QEVFIMRKVRHKNVVQFIG 356
+ +GS+G L + A+K+L +++ Q E E I++ V + +
Sbjct: 50 LGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLTKLEF 109
Query: 357 ACTKPPSLCIVTEFMSGGSVYDYLHKLKGVFKLPSLLKVAIDVSKGMNYLHQNNIIHRDL 416
+ +L +V E+ GG ++ +L ++ G F P A + YLH ++I+RDL
Sbjct: 110 SFKDNSNLYMVMEYAPGGEMFSHLRRI-GRFSEPHARFYAAQIVLTFEYLHSLDLIYRDL 168
Query: 417 KAANLLMDEN 426
K NL++D+
Sbjct: 169 KPENLMIDQQ 178
>pdb|3RP9|A Chain A, Crystal Structure Of The Apo Mapk From Toxoplasma Gondii,
25.M01780 Or Tgme49_007820
Length = 458
Score = 44.3 bits (103), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 44/186 (23%), Positives = 79/186 (42%), Gaps = 27/186 (14%)
Query: 249 ERQGWPSHRSSSPTSEPEDTGMKSHPYHLKIPNDGTDVWEIDPKHLKFGSKVASGSYGDL 308
E Q H SS PT+ +P +D W+I P + + +GSYG +
Sbjct: 26 EGQQRKQHHSSKPTAS--------------MPRPHSD-WQI-PDRYEIRHLIGTGSYGHV 69
Query: 309 YRGTYCSQDVAIKVLKPERINSDM--QKEFAQEVFIMRKVRHKNVVQFIGACTKPPSLCI 366
+ + + K R+ D+ K +E+ I+ ++ H +VV+ + P +
Sbjct: 70 CEAYDKLEKRVVAIKKILRVFEDLIDCKRILREIAILNRLNHDHVVKVLDIVI-PKDVEK 128
Query: 367 VTEFMSGGSVYDYLHKLKGVFKLPSLLK------VAIDVSKGMNYLHQNNIIHRDLKAAN 420
E + D K +F+ P L + ++ G+ Y+H I+HRDLK AN
Sbjct: 129 FDELYVVLEIAD--SDFKKLFRTPVYLTELHIKTLLYNLLVGVKYVHSAGILHRDLKPAN 186
Query: 421 LLMDEN 426
L++++
Sbjct: 187 CLVNQD 192
>pdb|2WTK|C Chain C, Structure Of The Heterotrimeric Lkb1-Stradalpha-Mo25alpha
Complex
pdb|2WTK|F Chain F, Structure Of The Heterotrimeric Lkb1-Stradalpha-Mo25alpha
Complex
Length = 305
Score = 44.3 bits (103), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 36/136 (26%), Positives = 63/136 (46%), Gaps = 10/136 (7%)
Query: 296 FGSKVASGSYGD----LYRGTYCSQDVAIKVLKPERINSDMQKEFAQEVFIMRKVRHKNV 351
G + GSYG L T C + V I K R + + +E+ ++R++RHKNV
Sbjct: 9 MGDLLGEGSYGKVKEVLDSETLCRRAVKILKKKKLRRIPNGEANVKKEIQLLRRLRHKNV 68
Query: 352 VQFIGAC--TKPPSLCIVTEFMSGG--SVYDYLHKLKGVFKLPSLLKVAIDVSKGMNYLH 407
+Q + + + +V E+ G + D + + + F + + G+ YLH
Sbjct: 69 IQLVDVLYNEEKQKMYMVMEYCVCGMQEMLDSVPEKR--FPVCQAHGYFCQLIDGLEYLH 126
Query: 408 QNNIIHRDLKAANLLM 423
I+H+D+K NLL+
Sbjct: 127 SQGIVHKDIKPGNLLL 142
>pdb|2VO0|A Chain A, Structure Of Pka-Pkb Chimera Complexed With C-(4-(4-
Chlorophenyl)-1-(7h-Pyrrolo(2,
3-D)pyrimidin-4-Yl)piperidin- 4-Yl)methylamine
Length = 351
Score = 44.3 bits (103), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 33/130 (25%), Positives = 62/130 (47%), Gaps = 4/130 (3%)
Query: 300 VASGSYGD--LYRGTYCSQDVAIKVLKPERINSDMQKEFA-QEVFIMRKVRHKNVVQFIG 356
+ +GS+G L + A+K+L +++ Q E E I++ V + +
Sbjct: 50 LGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLTKLEF 109
Query: 357 ACTKPPSLCIVTEFMSGGSVYDYLHKLKGVFKLPSLLKVAIDVSKGMNYLHQNNIIHRDL 416
+ +L +V E+ GG ++ +L ++ G F P A + YLH ++I+RDL
Sbjct: 110 SFKDNSNLYMVMEYAPGGEMFSHLRRI-GRFSEPHARFYAAQIVLTFEYLHSLDLIYRDL 168
Query: 417 KAANLLMDEN 426
K NL++D+
Sbjct: 169 KPENLMIDQQ 178
>pdb|2UVY|A Chain A, Structure Of Pka-pkb Chimera Complexed With Methyl-(4-(9h-
Purin-6-yl)-benzyl)-amine
pdb|2UVZ|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
C-Phenyl-C-(4-( 9h-Purin-6-Yl)-Phenyl)-Methylamine
pdb|2UW0|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 6-(4-(4-(4-
Chloro-Phenyl)-Piperidin-4-Yl)-Phenyl)-9h-Purine
pdb|2UW3|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 5-Methyl-4-
Phenyl-1h-Pyrazole
pdb|2UW5|A Chain A, Structure Of Pka-Pkb Chimera Complexed With (R)-2-(4-
Chloro-Phenyl)-2-(4-1h-Pyrazol-4-Yl)-Phenyl)-Ethylamine
pdb|2UW6|A Chain A, Structure Of Pka-Pkb Chimera Complexed With (S)-2-(4-
Chloro-Phenyl)-2-(4-1h-Pyrazol-4-Yl)-Phenyl)-Ethylamine
pdb|2UW8|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 2-(4-Chloro-
Phenyl)-2-Phenyl-Ethylamine
pdb|2VNW|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
(1-(9h-Purin-6- Yl)piperidin-4-Yl)methanamine
pdb|2VNY|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
(1-(9h-Purin-6- Yl)piperidin-4-Yl)amine
pdb|2VO3|A Chain A, Structure Of Pka-Pkb Chimera Complexed With C-(4-(4-
Chlorophenyl)-1-(7h-Pyrrolo(2,
3-D)pyrimidin-4-Yl)piperidin- 4-Yl)methylamine
pdb|2VO6|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 4-(4-
Chlorobenzyl)-1-(7h-Pyrrolo(2,
3-D)pyrimidin-4-Yl)piperidin- 4-Ylamine
Length = 351
Score = 44.3 bits (103), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 33/130 (25%), Positives = 62/130 (47%), Gaps = 4/130 (3%)
Query: 300 VASGSYGD--LYRGTYCSQDVAIKVLKPERINSDMQKEFA-QEVFIMRKVRHKNVVQFIG 356
+ +GS+G L + A+K+L +++ Q E E I++ V + +
Sbjct: 50 LGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLTKLEF 109
Query: 357 ACTKPPSLCIVTEFMSGGSVYDYLHKLKGVFKLPSLLKVAIDVSKGMNYLHQNNIIHRDL 416
+ +L +V E+ GG ++ +L ++ G F P A + YLH ++I+RDL
Sbjct: 110 SFKDNSNLYMVMEYAPGGEMFSHLRRI-GRFXEPHARFYAAQIVLTFEYLHSLDLIYRDL 168
Query: 417 KAANLLMDEN 426
K NL++D+
Sbjct: 169 KPENLMIDQQ 178
>pdb|1Q5K|A Chain A, Crystal Structure Of Glycogen Synthase Kinase 3 In
Complexed With Inhibitor
pdb|1Q5K|B Chain B, Crystal Structure Of Glycogen Synthase Kinase 3 In
Complexed With Inhibitor
pdb|3I4B|A Chain A, Crystal Structure Of Gsk3b In Complex With A
Pyrimidylpyrrole Inhibitor
pdb|3I4B|B Chain B, Crystal Structure Of Gsk3b In Complex With A
Pyrimidylpyrrole Inhibitor
pdb|3L1S|A Chain A, 3-Aryl-4-(Arylhydrazono)-1h-Pyrazol-5-Ones: Highly Ligand
Efficient And Potent Inhibitors Of Gsk3
pdb|3L1S|B Chain B, 3-Aryl-4-(Arylhydrazono)-1h-Pyrazol-5-Ones: Highly Ligand
Efficient And Potent Inhibitors Of Gsk3
Length = 414
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 45/163 (27%), Positives = 80/163 (49%), Gaps = 27/163 (16%)
Query: 300 VASGSYGDLYRGTYCSQD--VAIK-VLKPERINSDMQKEFAQEVFIMRKVRHKNVVQ--- 353
+ +GS+G +Y+ C VAIK VL+ +R + +E+ IMRK+ H N+V+
Sbjct: 56 IGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKN-------RELQIMRKLDHCNIVRLRY 108
Query: 354 -FIGACTKPPS--LCIVTEFMSGGSVYDYLHKLKGVFKLPSL-LKVAI-DVSKGMNYLHQ 408
F + K L +V +++ H + LP + +K+ + + + + Y+H
Sbjct: 109 FFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHS 168
Query: 409 NNIIHRDLKAANLLMDENEVSLLLSLCLFTVSILFCGKGRELI 451
I HRD+K NLL+D + + +L LC F G ++L+
Sbjct: 169 FGICHRDIKPQNLLLDPD--TAVLKLCDF-------GSAKQLV 202
>pdb|2C47|A Chain A, Structure Of Casein Kinase 1 Gamma 2
pdb|2C47|B Chain B, Structure Of Casein Kinase 1 Gamma 2
pdb|2C47|C Chain C, Structure Of Casein Kinase 1 Gamma 2
pdb|2C47|D Chain D, Structure Of Casein Kinase 1 Gamma 2
Length = 313
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 34/135 (25%), Positives = 65/135 (48%), Gaps = 10/135 (7%)
Query: 293 HLKFGSKVASGSYGDLYRGT--YCSQDVAIKV--LKPERINSDMQKEFAQEVFIMRKVRH 348
+ + G K+ G++G+L G Y ++ VAIK+ +K ++ F +++ V
Sbjct: 5 NFRVGKKIGCGNFGELRLGKNLYTNEYVAIKLEPIKSRAPQLHLEYRFYKQLSATEGVPQ 64
Query: 349 KNVVQFIGACTKPPSLCIVTEFMSGGSVYDYLHKLKGVFKLPSLLKVAIDVSKGMNYLHQ 408
V + G K ++ + + G S+ D F L ++L +AI + M Y+H
Sbjct: 65 ---VYYFGPXGKYNAMVLE---LLGPSLEDLFDLCDRTFTLKTVLMIAIQLITRMEYVHT 118
Query: 409 NNIIHRDLKAANLLM 423
++I+RD+K N L+
Sbjct: 119 KSLIYRDVKPENFLV 133
>pdb|1I09|A Chain A, Structure Of Glycogen Synthase Kinase-3 (Gsk3b)
pdb|1I09|B Chain B, Structure Of Glycogen Synthase Kinase-3 (Gsk3b)
pdb|1J1B|A Chain A, Binary Complex Structure Of Human Tau Protein Kinase I
With Amppnp
pdb|1J1B|B Chain B, Binary Complex Structure Of Human Tau Protein Kinase I
With Amppnp
pdb|1J1C|A Chain A, Binary Complex Structure Of Human Tau Protein Kinase I
With Adp
pdb|1J1C|B Chain B, Binary Complex Structure Of Human Tau Protein Kinase I
With Adp
pdb|2JLD|A Chain A, Extremely Tight Binding Of Ruthenium Complex To Glycogen
Synthase Kinase 3
pdb|2JLD|B Chain B, Extremely Tight Binding Of Ruthenium Complex To Glycogen
Synthase Kinase 3
pdb|3M1S|A Chain A, Structure Of Ruthenium Half-Sandwich Complex Bound To
Glycogen Synthase Kinase 3
pdb|3M1S|B Chain B, Structure Of Ruthenium Half-Sandwich Complex Bound To
Glycogen Synthase Kinase 3
pdb|3PUP|A Chain A, Structure Of Glycogen Synthase Kinase 3 Beta (Gsk3b) In
Complex With A Ruthenium Octasporine Ligand (Os1)
pdb|3PUP|B Chain B, Structure Of Glycogen Synthase Kinase 3 Beta (Gsk3b) In
Complex With A Ruthenium Octasporine Ligand (Os1)
Length = 420
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 45/163 (27%), Positives = 80/163 (49%), Gaps = 27/163 (16%)
Query: 300 VASGSYGDLYRGTYCSQD--VAIK-VLKPERINSDMQKEFAQEVFIMRKVRHKNVVQ--- 353
+ +GS+G +Y+ C VAIK VL+ +R + +E+ IMRK+ H N+V+
Sbjct: 62 IGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKN-------RELQIMRKLDHCNIVRLRY 114
Query: 354 -FIGACTKPPS--LCIVTEFMSGGSVYDYLHKLKGVFKLPSL-LKVAI-DVSKGMNYLHQ 408
F + K L +V +++ H + LP + +K+ + + + + Y+H
Sbjct: 115 FFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHS 174
Query: 409 NNIIHRDLKAANLLMDENEVSLLLSLCLFTVSILFCGKGRELI 451
I HRD+K NLL+D + + +L LC F G ++L+
Sbjct: 175 FGICHRDIKPQNLLLDPD--TAVLKLCDF-------GSAKQLV 208
>pdb|3SAY|A Chain A, Crystal Structure Of Human Glycogen Synthase Kinase 3 Beta
(Gsk3b) In Complex With Inhibitor 142
pdb|3SAY|B Chain B, Crystal Structure Of Human Glycogen Synthase Kinase 3 Beta
(Gsk3b) In Complex With Inhibitor 142
Length = 430
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 43/149 (28%), Positives = 75/149 (50%), Gaps = 20/149 (13%)
Query: 300 VASGSYGDLYRGTYCSQD--VAIK-VLKPERINSDMQKEFAQEVFIMRKVRHKNVVQ--- 353
+ +GS+G +Y+ C VAIK VL+ +R + +E+ IMRK+ H N+V+
Sbjct: 62 IGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKN-------RELQIMRKLDHCNIVRLRY 114
Query: 354 -FIGACTKPPS--LCIVTEFMSGGSVYDYLHKLKGVFKLPSL-LKVAI-DVSKGMNYLHQ 408
F + K L +V +++ H + LP + +K+ + + + + Y+H
Sbjct: 115 FFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHS 174
Query: 409 NNIIHRDLKAANLLMDENEVSLLLSLCLF 437
I HRD+K NLL+D + + +L LC F
Sbjct: 175 FGICHRDIKPQNLLLDPD--TAVLKLCDF 201
>pdb|3VN9|A Chain A, Rifined Crystal Structure Of Non-Phosphorylated Map2k6 In
A Putative Auto-Inhibition State
Length = 340
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 40/148 (27%), Positives = 70/148 (47%), Gaps = 7/148 (4%)
Query: 283 GTDVWEIDPKHLKFGSKVASGSYG--DLYRGTYCSQDVAIKVLKPERINSDMQKEFAQEV 340
G +E+ L+ ++ G+YG + R Q +A+K ++ +NS QK ++
Sbjct: 42 GNQNFEVKADDLEPIMELGRGAYGVVEKMRHVPSGQIMAVKRIR-ATVNSQEQKRLLMDL 100
Query: 341 FI-MRKVRHKNVVQFIGACTKPPSLCIVTEFMSGGSVYDYLHKLKGVFKLPS--LLKVAI 397
I MR V V F GA + + I E M Y + +P L K+A+
Sbjct: 101 DISMRTVDCPFTVTFYGALFREGDVWICMELMDTSLDKFYKQVIDKGQTIPEDILGKIAV 160
Query: 398 DVSKGMNYLHQN-NIIHRDLKAANLLMD 424
+ K + +LH ++IHRD+K +N+L++
Sbjct: 161 SIVKALEHLHSKLSVIHRDVKPSNVLIN 188
>pdb|1PYX|A Chain A, Gsk-3 Beta Complexed With Amp-Pnp
pdb|1PYX|B Chain B, Gsk-3 Beta Complexed With Amp-Pnp
pdb|3DU8|A Chain A, Crystal Structure Of Gsk-3 Beta In Complex With
Nms-869553a
pdb|3DU8|B Chain B, Crystal Structure Of Gsk-3 Beta In Complex With
Nms-869553a
Length = 422
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 43/149 (28%), Positives = 75/149 (50%), Gaps = 20/149 (13%)
Query: 300 VASGSYGDLYRGTYCSQD--VAIK-VLKPERINSDMQKEFAQEVFIMRKVRHKNVVQ--- 353
+ +GS+G +Y+ C VAIK VL+ +R + +E+ IMRK+ H N+V+
Sbjct: 64 IGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKN-------RELQIMRKLDHCNIVRLRY 116
Query: 354 -FIGACTKPPS--LCIVTEFMSGGSVYDYLHKLKGVFKLPSL-LKVAI-DVSKGMNYLHQ 408
F + K L +V +++ H + LP + +K+ + + + + Y+H
Sbjct: 117 FFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHS 176
Query: 409 NNIIHRDLKAANLLMDENEVSLLLSLCLF 437
I HRD+K NLL+D + + +L LC F
Sbjct: 177 FGICHRDIKPQNLLLDPD--TAVLKLCDF 203
>pdb|4ACC|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACC|B Chain B, Gsk3b In Complex With Inhibitor
pdb|4ACD|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACD|B Chain B, Gsk3b In Complex With Inhibitor
pdb|4ACG|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACG|B Chain B, Gsk3b In Complex With Inhibitor
pdb|4ACH|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACH|B Chain B, Gsk3b In Complex With Inhibitor
Length = 465
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 43/149 (28%), Positives = 75/149 (50%), Gaps = 20/149 (13%)
Query: 300 VASGSYGDLYRGTYCSQD--VAIK-VLKPERINSDMQKEFAQEVFIMRKVRHKNVVQ--- 353
+ +GS+G +Y+ C VAIK VL+ +R + +E+ IMRK+ H N+V+
Sbjct: 107 IGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKN-------RELQIMRKLDHCNIVRLRY 159
Query: 354 -FIGACTKPPS--LCIVTEFMSGGSVYDYLHKLKGVFKLPSL-LKVAI-DVSKGMNYLHQ 408
F + K L +V +++ H + LP + +K+ + + + + Y+H
Sbjct: 160 FFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHS 219
Query: 409 NNIIHRDLKAANLLMDENEVSLLLSLCLF 437
I HRD+K NLL+D + + +L LC F
Sbjct: 220 FGICHRDIKPQNLLLDPD--TAVLKLCDF 246
>pdb|4AFJ|A Chain A, 5-Aryl-4-Carboxamide-1,3-Oxazoles: Potent And Selective
Gsk-3 Inhibitors
pdb|4AFJ|B Chain B, 5-Aryl-4-Carboxamide-1,3-Oxazoles: Potent And Selective
Gsk-3 Inhibitors
Length = 367
Score = 43.9 bits (102), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 43/149 (28%), Positives = 75/149 (50%), Gaps = 20/149 (13%)
Query: 300 VASGSYGDLYRGTYCSQD--VAIK-VLKPERINSDMQKEFAQEVFIMRKVRHKNVVQ--- 353
+ +GS+G +Y+ C VAIK VL+ +R + +E+ IMRK+ H N+V+
Sbjct: 36 IGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKN-------RELQIMRKLDHCNIVRLRY 88
Query: 354 -FIGACTKPPS--LCIVTEFMSGGSVYDYLHKLKGVFKLPSL-LKVAI-DVSKGMNYLHQ 408
F + K L +V +++ H + LP + +K+ + + + + Y+H
Sbjct: 89 FFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHS 148
Query: 409 NNIIHRDLKAANLLMDENEVSLLLSLCLF 437
I HRD+K NLL+D + + +L LC F
Sbjct: 149 FGICHRDIKPQNLLLDPD--TAVLKLCDF 175
>pdb|3KL8|A Chain A, Camkiintide Inhibitor Complex
pdb|3KL8|C Chain C, Camkiintide Inhibitor Complex
pdb|3KL8|E Chain E, Camkiintide Inhibitor Complex
pdb|3KL8|G Chain G, Camkiintide Inhibitor Complex
pdb|3KL8|I Chain I, Camkiintide Inhibitor Complex
Length = 269
Score = 43.9 bits (102), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 26/125 (20%), Positives = 62/125 (49%), Gaps = 1/125 (0%)
Query: 317 DVAIKVLKPERINSDMQKEFAQEVFIMRKVRHKNVVQFIGACTKPPSLCIVTEFMSGGSV 376
+ A K++ +++++ ++ +E I RK++H N+V+ + + +V + ++GG +
Sbjct: 33 EFAAKIINTKKLSARDFQKLEREARICRKLQHPNIVRLHDSIQEESFHYLVFDLVTGGEL 92
Query: 377 YDYLHKLKGVFKLPSLLKVAIDVSKGMNYLHQNNIIHRDLKAANLLMDENEVSLLLSLCL 436
++ + + + + + + Y H N I+HR+LK NLL+ + L
Sbjct: 93 FEDI-VAREFYSEADASHCIQQILESIAYCHSNGIVHRNLKPENLLLASKAKGAAVKLAD 151
Query: 437 FTVSI 441
F ++I
Sbjct: 152 FGLAI 156
>pdb|2O5K|A Chain A, Crystal Structure Of Gsk3beta In Complex With A
Benzoimidazol Inhibitor
Length = 372
Score = 43.9 bits (102), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 45/163 (27%), Positives = 80/163 (49%), Gaps = 27/163 (16%)
Query: 300 VASGSYGDLYRGTYCSQD--VAIK-VLKPERINSDMQKEFAQEVFIMRKVRHKNVVQ--- 353
+ +GS+G +Y+ C VAIK VL+ +R + +E+ IMRK+ H N+V+
Sbjct: 41 IGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKN-------RELQIMRKLDHCNIVRLRY 93
Query: 354 -FIGACTKPPS--LCIVTEFMSGGSVYDYLHKLKGVFKLPSL-LKVAI-DVSKGMNYLHQ 408
F + K L +V +++ H + LP + +K+ + + + + Y+H
Sbjct: 94 FFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHS 153
Query: 409 NNIIHRDLKAANLLMDENEVSLLLSLCLFTVSILFCGKGRELI 451
I HRD+K NLL+D + + +L LC F G ++L+
Sbjct: 154 FGICHRDIKPQNLLLDPD--TAVLKLCDF-------GSAKQLV 187
>pdb|2BDW|A Chain A, Crystal Structure Of The Auto-Inhibited Kinase Domain Of
CalciumCALMODULIN ACTIVATED KINASE II
pdb|2BDW|B Chain B, Crystal Structure Of The Auto-Inhibited Kinase Domain Of
CalciumCALMODULIN ACTIVATED KINASE II
Length = 362
Score = 43.9 bits (102), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 26/125 (20%), Positives = 62/125 (49%), Gaps = 1/125 (0%)
Query: 317 DVAIKVLKPERINSDMQKEFAQEVFIMRKVRHKNVVQFIGACTKPPSLCIVTEFMSGGSV 376
+ A K++ +++++ ++ +E I RK++H N+V+ + + +V + ++GG +
Sbjct: 56 EFAAKIINTKKLSARDFQKLEREARICRKLQHPNIVRLHDSIQEESFHYLVFDLVTGGEL 115
Query: 377 YDYLHKLKGVFKLPSLLKVAIDVSKGMNYLHQNNIIHRDLKAANLLMDENEVSLLLSLCL 436
++ + + + + + + Y H N I+HR+LK NLL+ + L
Sbjct: 116 FEDI-VAREFYSEADASHCIQQILESIAYCHSNGIVHRNLKPENLLLASKAKGAAVKLAD 174
Query: 437 FTVSI 441
F ++I
Sbjct: 175 FGLAI 179
>pdb|1Q3D|A Chain A, Gsk-3 Beta Complexed With Staurosporine
pdb|1Q3D|B Chain B, Gsk-3 Beta Complexed With Staurosporine
pdb|1Q3W|A Chain A, Gsk-3 Beta Complexed With Alsterpaullone
pdb|1Q3W|B Chain B, Gsk-3 Beta Complexed With Alsterpaullone
pdb|1Q41|A Chain A, Gsk-3 Beta Complexed With Indirubin-3'-Monoxime
pdb|1Q41|B Chain B, Gsk-3 Beta Complexed With Indirubin-3'-Monoxime
pdb|1Q4L|A Chain A, Gsk-3 Beta Complexed With Inhibitor I-5
pdb|1Q4L|B Chain B, Gsk-3 Beta Complexed With Inhibitor I-5
pdb|3Q3B|A Chain A, 6-Amino-4-(Pyrimidin-4-Yl)pyridones: Novel Glycogen
Synthase Kinase-3 Inhibitors
pdb|3Q3B|B Chain B, 6-Amino-4-(Pyrimidin-4-Yl)pyridones: Novel Glycogen
Synthase Kinase-3 Inhibitors
Length = 424
Score = 43.9 bits (102), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 43/149 (28%), Positives = 75/149 (50%), Gaps = 20/149 (13%)
Query: 300 VASGSYGDLYRGTYCSQD--VAIK-VLKPERINSDMQKEFAQEVFIMRKVRHKNVVQ--- 353
+ +GS+G +Y+ C VAIK VL+ +R + +E+ IMRK+ H N+V+
Sbjct: 66 IGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKN-------RELQIMRKLDHCNIVRLRY 118
Query: 354 -FIGACTKPPS--LCIVTEFMSGGSVYDYLHKLKGVFKLPSL-LKVAI-DVSKGMNYLHQ 408
F + K L +V +++ H + LP + +K+ + + + + Y+H
Sbjct: 119 FFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHS 178
Query: 409 NNIIHRDLKAANLLMDENEVSLLLSLCLF 437
I HRD+K NLL+D + + +L LC F
Sbjct: 179 FGICHRDIKPQNLLLDPD--TAVLKLCDF 205
>pdb|4DIT|A Chain A, Crystal Structure Of Gsk3beta In Complex With A
Imidazopyridine Inhibitor
Length = 382
Score = 43.9 bits (102), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 43/149 (28%), Positives = 75/149 (50%), Gaps = 20/149 (13%)
Query: 300 VASGSYGDLYRGTYCSQD--VAIK-VLKPERINSDMQKEFAQEVFIMRKVRHKNVVQ--- 353
+ +GS+G +Y+ C VAIK VL+ +R + +E+ IMRK+ H N+V+
Sbjct: 40 IGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKN-------RELQIMRKLDHCNIVRLRY 92
Query: 354 -FIGACTKPPS--LCIVTEFMSGGSVYDYLHKLKGVFKLPSL-LKVAI-DVSKGMNYLHQ 408
F + K L +V +++ H + LP + +K+ + + + + Y+H
Sbjct: 93 FFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHS 152
Query: 409 NNIIHRDLKAANLLMDENEVSLLLSLCLF 437
I HRD+K NLL+D + + +L LC F
Sbjct: 153 FGICHRDIKPQNLLLDPD--TAVLKLCDF 179
>pdb|1R0E|A Chain A, Glycogen Synthase Kinase-3 Beta In Complex With
3-Indolyl-4- Arylmaleimide Inhibitor
pdb|1R0E|B Chain B, Glycogen Synthase Kinase-3 Beta In Complex With
3-Indolyl-4- Arylmaleimide Inhibitor
Length = 391
Score = 43.9 bits (102), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 45/163 (27%), Positives = 80/163 (49%), Gaps = 27/163 (16%)
Query: 300 VASGSYGDLYRGTYCSQD--VAIK-VLKPERINSDMQKEFAQEVFIMRKVRHKNVVQ--- 353
+ +GS+G +Y+ C VAIK VL+ +R + +E+ IMRK+ H N+V+
Sbjct: 33 IGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKN-------RELQIMRKLDHCNIVRLRY 85
Query: 354 -FIGACTKPPS--LCIVTEFMSGGSVYDYLHKLKGVFKLPSL-LKVAI-DVSKGMNYLHQ 408
F + K L +V +++ H + LP + +K+ + + + + Y+H
Sbjct: 86 FFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHS 145
Query: 409 NNIIHRDLKAANLLMDENEVSLLLSLCLFTVSILFCGKGRELI 451
I HRD+K NLL+D + + +L LC F G ++L+
Sbjct: 146 FGICHRDIKPQNLLLDPD--TAVLKLCDF-------GSAKQLV 179
>pdb|1GNG|A Chain A, Glycogen Synthase Kinase-3 Beta (Gsk3) Complex With
Frattide Peptide
pdb|1GNG|B Chain B, Glycogen Synthase Kinase-3 Beta (Gsk3) Complex With
Frattide Peptide
Length = 378
Score = 43.9 bits (102), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 43/149 (28%), Positives = 75/149 (50%), Gaps = 20/149 (13%)
Query: 300 VASGSYGDLYRGTYCSQD--VAIK-VLKPERINSDMQKEFAQEVFIMRKVRHKNVVQ--- 353
+ +GS+G +Y+ C VAIK VL+ +R + +E+ IMRK+ H N+V+
Sbjct: 47 IGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKN-------RELQIMRKLDHCNIVRLRY 99
Query: 354 -FIGACTKPPS--LCIVTEFMSGGSVYDYLHKLKGVFKLPSL-LKVAI-DVSKGMNYLHQ 408
F + K L +V +++ H + LP + +K+ + + + + Y+H
Sbjct: 100 FFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHS 159
Query: 409 NNIIHRDLKAANLLMDENEVSLLLSLCLF 437
I HRD+K NLL+D + + +L LC F
Sbjct: 160 FGICHRDIKPQNLLLDPD--TAVLKLCDF 186
>pdb|3KK8|A Chain A, Camkii Substrate Complex A
Length = 284
Score = 43.9 bits (102), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 26/125 (20%), Positives = 62/125 (49%), Gaps = 1/125 (0%)
Query: 317 DVAIKVLKPERINSDMQKEFAQEVFIMRKVRHKNVVQFIGACTKPPSLCIVTEFMSGGSV 376
+ A K++ +++++ ++ +E I RK++H N+V+ + + +V + ++GG +
Sbjct: 33 EFAAKIINTKKLSARDFQKLEREARICRKLQHPNIVRLHDSIQEESFHYLVFDLVTGGEL 92
Query: 377 YDYLHKLKGVFKLPSLLKVAIDVSKGMNYLHQNNIIHRDLKAANLLMDENEVSLLLSLCL 436
++ + + + + + + Y H N I+HR+LK NLL+ + L
Sbjct: 93 FEDI-VAREFYSEADASHCIQQILESIAYCHSNGIVHRNLKPENLLLASKAKGAAVKLAD 151
Query: 437 FTVSI 441
F ++I
Sbjct: 152 FGLAI 156
>pdb|3KK9|A Chain A, Camkii Substrate Complex B
Length = 282
Score = 43.9 bits (102), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 26/125 (20%), Positives = 62/125 (49%), Gaps = 1/125 (0%)
Query: 317 DVAIKVLKPERINSDMQKEFAQEVFIMRKVRHKNVVQFIGACTKPPSLCIVTEFMSGGSV 376
+ A K++ +++++ ++ +E I RK++H N+V+ + + +V + ++GG +
Sbjct: 32 EFAAKIINTKKLSARDFQKLEREARICRKLQHPNIVRLHDSIQEESFHYLVFDLVTGGEL 91
Query: 377 YDYLHKLKGVFKLPSLLKVAIDVSKGMNYLHQNNIIHRDLKAANLLMDENEVSLLLSLCL 436
++ + + + + + + Y H N I+HR+LK NLL+ + L
Sbjct: 92 FEDI-VAREFYSEADASHCIQQILESIAYCHSNGIVHRNLKPENLLLASKAKGAAVKLAD 150
Query: 437 FTVSI 441
F ++I
Sbjct: 151 FGLAI 155
>pdb|2OW3|A Chain A, Glycogen Synthase Kinase-3 Beta In Complex With Bis-
(Indole)maleimide Pyridinophane Inhibitor
pdb|2OW3|B Chain B, Glycogen Synthase Kinase-3 Beta In Complex With Bis-
(Indole)maleimide Pyridinophane Inhibitor
Length = 352
Score = 43.9 bits (102), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 43/149 (28%), Positives = 76/149 (51%), Gaps = 20/149 (13%)
Query: 300 VASGSYGDLYRGTYC--SQDVAIK-VLKPERINSDMQKEFAQEVFIMRKVRHKNVVQ--- 353
+ +GS+G +Y+ C + VAIK VL+ +R + +E+ IMRK+ H N+V+
Sbjct: 28 IGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKN-------RELQIMRKLDHCNIVRLRY 80
Query: 354 -FIGACTKPPS--LCIVTEFMSGGSVYDYLHKLKGVFKLPSL-LKVAI-DVSKGMNYLHQ 408
F + K L +V +++ H + LP + +K+ + + + + Y+H
Sbjct: 81 FFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHS 140
Query: 409 NNIIHRDLKAANLLMDENEVSLLLSLCLF 437
I HRD+K NLL+D + + +L LC F
Sbjct: 141 FGICHRDIKPQNLLLDPD--TAVLKLCDF 167
>pdb|3F7Z|A Chain A, X-ray Co-crystal Structure Of Glycogen Synthase Kinase
3beta In Complex With An Inhibitor
pdb|3F7Z|B Chain B, X-ray Co-crystal Structure Of Glycogen Synthase Kinase
3beta In Complex With An Inhibitor
Length = 350
Score = 43.9 bits (102), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 43/149 (28%), Positives = 76/149 (51%), Gaps = 20/149 (13%)
Query: 300 VASGSYGDLYRGTYC--SQDVAIK-VLKPERINSDMQKEFAQEVFIMRKVRHKNVVQ--- 353
+ +GS+G +Y+ C + VAIK VL+ +R + +E+ IMRK+ H N+V+
Sbjct: 29 IGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKN-------RELQIMRKLDHCNIVRLRY 81
Query: 354 -FIGACTKPPS--LCIVTEFMSGGSVYDYLHKLKGVFKLPSL-LKVAI-DVSKGMNYLHQ 408
F + K L +V +++ H + LP + +K+ + + + + Y+H
Sbjct: 82 FFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHS 141
Query: 409 NNIIHRDLKAANLLMDENEVSLLLSLCLF 437
I HRD+K NLL+D + + +L LC F
Sbjct: 142 FGICHRDIKPQNLLLDPD--TAVLKLCDF 168
>pdb|1BI8|A Chain A, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structures Cdk6-P19ink4d Inhibitor Complex
pdb|1BI8|C Chain C, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structures Cdk6-P19ink4d Inhibitor Complex
pdb|1BI7|A Chain A, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structure Of The Cdk6-P16ink4a Tumor Suppressor
Complex
pdb|1BLX|A Chain A, P19ink4dCDK6 COMPLEX
pdb|1G3N|A Chain A, Structure Of A P18(Ink4c)-Cdk6-K-Cyclin Ternary Complex
pdb|1G3N|E Chain E, Structure Of A P18(Ink4c)-Cdk6-K-Cyclin Ternary Complex
Length = 326
Score = 43.9 bits (102), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 34/139 (24%), Positives = 68/139 (48%), Gaps = 15/139 (10%)
Query: 298 SKVASGSYGDLYRGTYCSQD---VAIKVLKPERINSDMQKEFAQEVFIMRKVR---HKNV 351
+++ G+YG +++ VA+K ++ + M +EV ++R + H NV
Sbjct: 17 AEIGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIREVAVLRHLETFEHPNV 76
Query: 352 VQFIGACT-----KPPSLCIVTEFMSGGSVYDYLHKLK--GVFKLPSLLKVAIDVSKGMN 404
V+ CT + L +V E + + YL K+ GV ++ + + +G++
Sbjct: 77 VRLFDVCTVSRTDRETKLTLVFEHVDQ-DLTTYLDKVPEPGV-PTETIKDMMFQLLRGLD 134
Query: 405 YLHQNNIIHRDLKAANLLM 423
+LH + ++HRDLK N+L+
Sbjct: 135 FLHSHRVVHRDLKPQNILV 153
>pdb|1ZYC|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|C Chain C, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|D Chain D, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYD|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type Complexed With Atp.
pdb|1ZYD|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type Complexed With Atp
Length = 303
Score = 43.9 bits (102), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 30/140 (21%), Positives = 61/140 (43%), Gaps = 14/140 (10%)
Query: 300 VASGSYGDLYRGTYCSQDVAIKVLKPERINSDMQKEFAQEVFIMRKVRHKNVVQF----- 354
+ G++G + + + D +K R + EV ++ + H+ VV++
Sbjct: 14 LGQGAFGQVVKAR-NALDSRYYAIKKIRHTEEKLSTILSEVMLLASLNHQYVVRYYAAWL 72
Query: 355 --------IGACTKPPSLCIVTEFMSGGSVYDYLHKLKGVFKLPSLLKVAIDVSKGMNYL 406
+ A K +L I E+ ++YD +H + ++ + + ++Y+
Sbjct: 73 ERRNFVKPMTAVKKKSTLFIQMEYCENRTLYDLIHSENLNQQRDEYWRLFRQILEALSYI 132
Query: 407 HQNNIIHRDLKAANLLMDEN 426
H IIHRDLK N+ +DE+
Sbjct: 133 HSQGIIHRDLKPMNIFIDES 152
>pdb|3TAC|A Chain A, Crystal Structure Of The Liprin-AlphaCASK COMPLEX
Length = 361
Score = 43.9 bits (102), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 32/133 (24%), Positives = 61/133 (45%), Gaps = 6/133 (4%)
Query: 315 SQDVAIKVLKPERINSD---MQKEFAQEVFIMRKVRHKNVVQFIGACTKPPSLCIVTEFM 371
Q A+K++ + S ++ +E I ++H ++V+ + + L +V EFM
Sbjct: 51 GQQFAVKIVDVAKFTSSPGLSTEDLKREASICHMLKHPHIVELLETYSSDGMLYMVFEFM 110
Query: 372 SGGSV-YDYLHKLKGVFKLPSLLK--VAIDVSKGMNYLHQNNIIHRDLKAANLLMDENEV 428
G + ++ + + F + + + + Y H NNIIHRD+K +L+ E
Sbjct: 111 DGADLCFEIVKRADAGFVYSEAVASHYMRQILEALRYCHDNNIIHRDVKPHCVLLASKEN 170
Query: 429 SLLLSLCLFTVSI 441
S + L F V+I
Sbjct: 171 SAPVKLGGFGVAI 183
>pdb|3ZRK|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRK|B Chain B, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRL|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRL|B Chain B, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRM|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As Gsk-
3beta Inhibitors
pdb|3ZRM|B Chain B, Identification Of 2-(4-Pyridyl)thienopyridinones As Gsk-
3beta Inhibitors
Length = 371
Score = 43.9 bits (102), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 43/149 (28%), Positives = 75/149 (50%), Gaps = 20/149 (13%)
Query: 300 VASGSYGDLYRGTYCSQD--VAIK-VLKPERINSDMQKEFAQEVFIMRKVRHKNVVQ--- 353
+ +GS+G +Y+ C VAIK VL+ +R + +E+ IMRK+ H N+V+
Sbjct: 40 IGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKN-------RELQIMRKLDHCNIVRLRY 92
Query: 354 -FIGACTKPPS--LCIVTEFMSGGSVYDYLHKLKGVFKLPSL-LKVAI-DVSKGMNYLHQ 408
F + K L +V +++ H + LP + +K+ + + + + Y+H
Sbjct: 93 FFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHS 152
Query: 409 NNIIHRDLKAANLLMDENEVSLLLSLCLF 437
I HRD+K NLL+D + + +L LC F
Sbjct: 153 FGICHRDIKPQNLLLDPD--TAVLKLCDF 179
>pdb|3ZDI|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin
Peptide And Inhibitor 7d
Length = 350
Score = 43.9 bits (102), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 43/149 (28%), Positives = 76/149 (51%), Gaps = 20/149 (13%)
Query: 300 VASGSYGDLYRGTYC--SQDVAIK-VLKPERINSDMQKEFAQEVFIMRKVRHKNVVQ--- 353
+ +GS+G +Y+ C + VAIK VL+ +R + +E+ IMRK+ H N+V+
Sbjct: 28 IGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKN-------RELQIMRKLDHCNIVRLRY 80
Query: 354 -FIGACTKPPS--LCIVTEFMSGGSVYDYLHKLKGVFKLPSL-LKVAI-DVSKGMNYLHQ 408
F + K L +V +++ H + LP + +K+ + + + + Y+H
Sbjct: 81 FFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHS 140
Query: 409 NNIIHRDLKAANLLMDENEVSLLLSLCLF 437
I HRD+K NLL+D + + +L LC F
Sbjct: 141 FGICHRDIKPQNLLLDPD--TAVLKLCDF 167
>pdb|3GB2|A Chain A, Gsk3beta Inhibitor Complex
Length = 353
Score = 43.9 bits (102), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 43/149 (28%), Positives = 76/149 (51%), Gaps = 20/149 (13%)
Query: 300 VASGSYGDLYRGTYC--SQDVAIK-VLKPERINSDMQKEFAQEVFIMRKVRHKNVVQ--- 353
+ +GS+G +Y+ C + VAIK VL+ +R + +E+ IMRK+ H N+V+
Sbjct: 32 IGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKN-------RELQIMRKLDHCNIVRLRY 84
Query: 354 -FIGACTKPPS--LCIVTEFMSGGSVYDYLHKLKGVFKLPSL-LKVAI-DVSKGMNYLHQ 408
F + K L +V +++ H + LP + +K+ + + + + Y+H
Sbjct: 85 FFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHS 144
Query: 409 NNIIHRDLKAANLLMDENEVSLLLSLCLF 437
I HRD+K NLL+D + + +L LC F
Sbjct: 145 FGICHRDIKPQNLLLDPD--TAVLKLCDF 171
>pdb|3C0G|A Chain A, Cask Cam-kinase Domain- 3'-amp Complex, P1 Form
pdb|3C0G|B Chain B, Cask Cam-kinase Domain- 3'-amp Complex, P1 Form
pdb|3C0H|A Chain A, Cask Cam-Kinase Domain- Amppnp Complex, P1 Form
pdb|3C0H|B Chain B, Cask Cam-Kinase Domain- Amppnp Complex, P1 Form
pdb|3C0I|A Chain A, Cask Cam-Kinase Domain- 3'-Amp Complex, P212121 Form
Length = 351
Score = 43.9 bits (102), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 32/133 (24%), Positives = 61/133 (45%), Gaps = 6/133 (4%)
Query: 315 SQDVAIKVLKPERINSD---MQKEFAQEVFIMRKVRHKNVVQFIGACTKPPSLCIVTEFM 371
Q A+K++ + S ++ +E I ++H ++V+ + + L +V EFM
Sbjct: 49 GQQFAVKIVDVAKFTSSPGLSTEDLKREASICHMLKHPHIVELLETYSSDGMLYMVFEFM 108
Query: 372 SGGSV-YDYLHKLKGVFKLPSLLK--VAIDVSKGMNYLHQNNIIHRDLKAANLLMDENEV 428
G + ++ + + F + + + + Y H NNIIHRD+K +L+ E
Sbjct: 109 DGADLCFEIVKRADAGFVYSEAVASHYMRQILEALRYCHDNNIIHRDVKPHCVLLASKEN 168
Query: 429 SLLLSLCLFTVSI 441
S + L F V+I
Sbjct: 169 SAPVKLGGFGVAI 181
>pdb|3SD0|A Chain A, Identification Of A Glycogen Synthase Kinase-3b Inhibitor
That Attenuates Hyperactivity In Clock Mutant Mice
pdb|3SD0|B Chain B, Identification Of A Glycogen Synthase Kinase-3b Inhibitor
That Attenuates Hyperactivity In Clock Mutant Mice
pdb|4B7T|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin
Peptide And Leucettine L4
Length = 350
Score = 43.9 bits (102), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 43/149 (28%), Positives = 76/149 (51%), Gaps = 20/149 (13%)
Query: 300 VASGSYGDLYRGTYC--SQDVAIK-VLKPERINSDMQKEFAQEVFIMRKVRHKNVVQ--- 353
+ +GS+G +Y+ C + VAIK VL+ +R + +E+ IMRK+ H N+V+
Sbjct: 28 IGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKN-------RELQIMRKLDHCNIVRLRY 80
Query: 354 -FIGACTKPPS--LCIVTEFMSGGSVYDYLHKLKGVFKLPSL-LKVAI-DVSKGMNYLHQ 408
F + K L +V +++ H + LP + +K+ + + + + Y+H
Sbjct: 81 FFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHS 140
Query: 409 NNIIHRDLKAANLLMDENEVSLLLSLCLF 437
I HRD+K NLL+D + + +L LC F
Sbjct: 141 FGICHRDIKPQNLLLDPD--TAVLKLCDF 167
>pdb|1YHS|A Chain A, Crystal Structure Of Pim-1 Bound To Staurosporine
pdb|1YI3|A Chain A, Crystal Structure Of Pim-1 Bound To Ly294002
pdb|1YI4|A Chain A, Structure Of Pim-1 Bound To Adenosine
Length = 273
Score = 43.5 bits (101), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 35/147 (23%), Positives = 69/147 (46%), Gaps = 10/147 (6%)
Query: 295 KFGSKVASGSYGDLYRGTYCSQD--VAIKVLKPERINSDMQ----KEFAQEVFIMRKVR- 347
+ G + SG +G +Y G S + VAIK ++ +RI+ + EV +++KV
Sbjct: 7 QVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSS 66
Query: 348 -HKNVVQFIGACTKPPSLCIVTEFMSG-GSVYDYLHKLKGVFKLPSLLKVAIDVSKGMNY 405
V++ + +P S ++ E ++D++ + +G + V + + +
Sbjct: 67 GFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITE-RGALQEELARSFFWQVLEAVRH 125
Query: 406 LHQNNIIHRDLKAANLLMDENEVSLLL 432
H ++HRD+K N+L+D N L L
Sbjct: 126 CHNXGVLHRDIKDENILIDLNRGELKL 152
>pdb|3NIE|A Chain A, Crystal Structure Of Pf11_0147
pdb|3NIE|B Chain B, Crystal Structure Of Pf11_0147
Length = 429
Score = 43.5 bits (101), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 45/165 (27%), Positives = 80/165 (48%), Gaps = 34/165 (20%)
Query: 276 HLKIPNDGTDVWEIDPKHLKFGSKVASGSYGDLYRG--TYCSQDVAIKVLKPERINSDM- 332
++K+P D +EI KHL + GSYG +Y +++VAIK K R+ D+
Sbjct: 23 NVKVP----DNYEI--KHL-----IGRGSYGYVYLAYDKNANKNVAIK--KVNRMFEDLI 69
Query: 333 -QKEFAQEVFIMRKVRHKNVVQFIGACTKPPSLCIVTEFMSGGSVYDYLH----KLKGVF 387
K +E+ I+ +++ +++ L I + + +Y L LK +F
Sbjct: 70 DCKRILREITILNRLKSDYIIRL-------HDLIIPEDLLKFDELYIVLEIADSDLKKLF 122
Query: 388 KLPSLLK------VAIDVSKGMNYLHQNNIIHRDLKAANLLMDEN 426
K P L + ++ G ++H++ IIHRDLK AN L++++
Sbjct: 123 KTPIFLTEQHVKTILYNLLLGEKFIHESGIIHRDLKPANCLLNQD 167
>pdb|1JOW|B Chain B, Crystal Structure Of A Complex Of Human Cdk6 And A Viral
Cyclin
pdb|1XO2|B Chain B, Crystal Structure Of A Human Cyclin-Dependent Kinase 6
Complex With A Flavonol Inhibitor, Fisetin
pdb|2EUF|B Chain B, X-Ray Structure Of Human Cdk6-Vcyclin In Complex With The
Inhibitor Pd0332991
pdb|2F2C|B Chain B, X-Ray Structure Of Human Cdk6-Vcyclinwith The Inhibitor
Aminopurvalanol
Length = 308
Score = 43.5 bits (101), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 34/139 (24%), Positives = 68/139 (48%), Gaps = 15/139 (10%)
Query: 298 SKVASGSYGDLYRGTYCSQD---VAIKVLKPERINSDMQKEFAQEVFIMRKVR---HKNV 351
+++ G+YG +++ VA+K ++ + M +EV ++R + H NV
Sbjct: 17 AEIGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIREVAVLRHLETFEHPNV 76
Query: 352 VQFIGACT-----KPPSLCIVTEFMSGGSVYDYLHKLK--GVFKLPSLLKVAIDVSKGMN 404
V+ CT + L +V E + + YL K+ GV ++ + + +G++
Sbjct: 77 VRLFDVCTVSRTDRETKLTLVFEHVDQ-DLTTYLDKVPEPGV-PTETIKDMMFQLLRGLD 134
Query: 405 YLHQNNIIHRDLKAANLLM 423
+LH + ++HRDLK N+L+
Sbjct: 135 FLHSHRVVHRDLKPQNILV 153
>pdb|4AF3|A Chain A, Human Aurora B Kinase In Complex With Incenp And Vx-680
Length = 292
Score = 43.5 bits (101), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 29/130 (22%), Positives = 58/130 (44%), Gaps = 4/130 (3%)
Query: 294 LKFGSKVASGSYGDLY--RGTYCSQDVAIKVLKPERINSD-MQKEFAQEVFIMRKVRHKN 350
+ G + G +G++Y R VA+KVL +I + ++ + +E+ I + H N
Sbjct: 25 FEIGRPLGKGKFGNVYLAREKKSHFIVALKVLFKSQIEKEGVEHQLRREIEIQAHLHHPN 84
Query: 351 VVQFIGACTKPPSLCIVTEFMSGGSVYDYLHKLKGVFKLPSLLKVAIDVSKGMNYLHQNN 410
+++ + ++ E+ G +Y L K F + +++ + Y H
Sbjct: 85 ILRLYNYFYDRRRIYLILEYAPRGELYKELQK-SCTFDEQRTATIMEELADALMYCHGKK 143
Query: 411 IIHRDLKAAN 420
+IHRD+K N
Sbjct: 144 VIHRDIKPEN 153
>pdb|3NUP|A Chain A, Cdk6 (Monomeric) In Complex With Inhibitor
pdb|3NUX|A Chain A, Cdk6 (Monomeric) In Complex With Inhibitor
pdb|4AUA|A Chain A, Liganded X-ray Crystal Structure Of Cyclin Dependent
Kinase 6 (cdk6)
pdb|4EZ5|A Chain A, Cdk6 (monomeric) In Complex With Inhibitor
Length = 307
Score = 43.5 bits (101), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 34/139 (24%), Positives = 68/139 (48%), Gaps = 15/139 (10%)
Query: 298 SKVASGSYGDLYRGTYCSQD---VAIKVLKPERINSDMQKEFAQEVFIMRKVR---HKNV 351
+++ G+YG +++ VA+K ++ + M +EV ++R + H NV
Sbjct: 17 AEIGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIREVAVLRHLETFEHPNV 76
Query: 352 VQFIGACT-----KPPSLCIVTEFMSGGSVYDYLHKLK--GVFKLPSLLKVAIDVSKGMN 404
V+ CT + L +V E + + YL K+ GV ++ + + +G++
Sbjct: 77 VRLFDVCTVSRTDRETKLTLVFEHVDQ-DLTTYLDKVPEPGV-PTETIKDMMFQLLRGLD 134
Query: 405 YLHQNNIIHRDLKAANLLM 423
+LH + ++HRDLK N+L+
Sbjct: 135 FLHSHRVVHRDLKPQNILV 153
>pdb|3P23|A Chain A, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
pdb|3P23|B Chain B, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
pdb|3P23|C Chain C, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
pdb|3P23|D Chain D, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
Length = 432
Score = 43.1 bits (100), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 35/128 (27%), Positives = 66/128 (51%), Gaps = 12/128 (9%)
Query: 300 VASGSYGDL-YRGTYCSQDVAIKVLKPERINSDMQKEFA-QEVFIMRKV-RHKNVVQFIG 356
+ G+ G + YRG + ++DVA+K + PE + FA +EV ++R+ H NV+++
Sbjct: 32 LGHGAEGTIVYRGMFDNRDVAVKRILPECFS------FADREVQLLRESDEHPNVIRYF- 84
Query: 357 ACT-KPPSLCIVTEFMSGGSVYDYLHKLKGVFKLPSLLKVAIDVSKGMNYLHQNNIIHRD 415
CT K + + ++ +Y+ + + + + G+ +LH NI+HRD
Sbjct: 85 -CTEKDRQFQYIAIELCAATLQEYVEQKDFAHLGLEPITLLQQTTSGLAHLHSLNIVHRD 143
Query: 416 LKAANLLM 423
LK N+L+
Sbjct: 144 LKPHNILI 151
>pdb|3F88|A Chain A, Glycogen Synthase Kinase 3beta Inhibitor Complex
pdb|3F88|B Chain B, Glycogen Synthase Kinase 3beta Inhibitor Complex
Length = 349
Score = 43.1 bits (100), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 42/149 (28%), Positives = 74/149 (49%), Gaps = 20/149 (13%)
Query: 300 VASGSYGDLYRGTYC--SQDVAIK-VLKPERINSDMQKEFAQEVFIMRKVRHKNVVQF-- 354
+ +GS+G +Y+ C + VAIK VL+ +R + +E+ IMRK+ H N+V+
Sbjct: 28 IGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKN-------RELQIMRKLDHCNIVRLRY 80
Query: 355 ----IGACTKPPSLCIVTEFMSGGSVYDYLHKLKGVFKLPSL-LKVAI-DVSKGMNYLHQ 408
G L +V +++ H + LP + +K+ + + + + Y+H
Sbjct: 81 FFYSSGEKKDVVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHS 140
Query: 409 NNIIHRDLKAANLLMDENEVSLLLSLCLF 437
I HRD+K NLL+D + + +L LC F
Sbjct: 141 FGICHRDIKPQNLLLDPD--TAVLKLCDF 167
>pdb|2CMW|A Chain A, Structure Of Human Casein Kinase 1 Gamma-1 In Complex With
2-(2-Hydroxyethylamino)-6-(3-Chloroanilino)-9-
Isopropylpurine (Casp Target)
Length = 310
Score = 43.1 bits (100), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 33/132 (25%), Positives = 61/132 (46%), Gaps = 5/132 (3%)
Query: 294 LKFGSKVASGSYGDLYRGT--YCSQDVAIKVLKPERINSDMQKEFAQEVFIMRKVRHKNV 351
++ G K+ G++G+L G Y ++ VAIK+ + + E+ +
Sbjct: 2 MRVGKKIGCGNFGELRLGKNLYTNEYVAIKLEPIKSRAPQLHLEYRFYKQLGSAGEGLPQ 61
Query: 352 VQFIGACTKPPSLCIVTEFMSGGSVYDYLHKLKGVFKLPSLLKVAIDVSKGMNYLHQNNI 411
V + G K ++ + + G S+ D F L ++L +AI + M Y+H N+
Sbjct: 62 VYYFGPXGKYNAMVLE---LLGPSLEDLFDLCDRTFTLKTVLMIAIQLLSRMEYVHSKNL 118
Query: 412 IHRDLKAANLLM 423
I+RD+K N L+
Sbjct: 119 IYRDVKPENFLI 130
>pdb|1YWV|A Chain A, Crystal Structures Of Proto-Oncogene Kinase Pim1: A Target
Of Aberrant Somatic Hypermutations In Diffuse Large Cell
Lymphoma
pdb|1YXT|A Chain A, Crystal Structure Of Kinase Pim1 In Complex With Amppnp
pdb|1YXU|A Chain A, Crystal Structure Of Kinase Pim1 In Complex With Amp
pdb|1YXU|B Chain B, Crystal Structure Of Kinase Pim1 In Complex With Amp
pdb|1YXU|C Chain C, Crystal Structure Of Kinase Pim1 In Complex With Amp
pdb|1YXU|D Chain D, Crystal Structure Of Kinase Pim1 In Complex With Amp
pdb|1YXV|A Chain A, Crystal Structure Of Kinase Pim1 In Complex With
3,4-Dihydroxy-1- Methylquinolin-2(1h)-One
pdb|1YXX|A Chain A, Crystal Structure Of Kinase Pim1 In Complex With
(3e)-3-[(4- Hydroxyphenyl)imino]-1h-Indol-2(3h)-One
pdb|2O3P|A Chain A, Crystal Structure Of Pim1 With Quercetin
pdb|2O63|A Chain A, Crystal Structure Of Pim1 With Myricetin
pdb|2O64|A Chain A, Crystal Structure Of Pim1 With Quercetagetin
pdb|2O65|A Chain A, Crystal Structure Of Pim1 With Pentahydroxyflavone
Length = 293
Score = 43.1 bits (100), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 35/147 (23%), Positives = 69/147 (46%), Gaps = 10/147 (6%)
Query: 295 KFGSKVASGSYGDLYRGTYCSQD--VAIKVLKPERINSDMQ----KEFAQEVFIMRKVR- 347
+ G + SG +G +Y G S + VAIK ++ +RI+ + EV +++KV
Sbjct: 11 QVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSS 70
Query: 348 -HKNVVQFIGACTKPPSLCIVTEFMSG-GSVYDYLHKLKGVFKLPSLLKVAIDVSKGMNY 405
V++ + +P S ++ E ++D++ + +G + V + + +
Sbjct: 71 GFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITE-RGALQEELARSFFWQVLEAVRH 129
Query: 406 LHQNNIIHRDLKAANLLMDENEVSLLL 432
H ++HRD+K N+L+D N L L
Sbjct: 130 CHNCGVLHRDIKDENILIDLNRGELKL 156
>pdb|1XQZ|A Chain A, Crystal Structure Of Hpim-1 Kinase At 2.1 A Resolution
pdb|1XR1|A Chain A, Crystal Structure Of Hpim-1 Kinase In Complex With Amp-Pnp
At 2.1 A Resolution
Length = 300
Score = 43.1 bits (100), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 35/147 (23%), Positives = 69/147 (46%), Gaps = 10/147 (6%)
Query: 295 KFGSKVASGSYGDLYRGTYCSQD--VAIKVLKPERINSDMQ----KEFAQEVFIMRKVR- 347
+ G + SG +G +Y G S + VAIK ++ +RI+ + EV +++KV
Sbjct: 26 QVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSS 85
Query: 348 -HKNVVQFIGACTKPPSLCIVTEFMSG-GSVYDYLHKLKGVFKLPSLLKVAIDVSKGMNY 405
V++ + +P S ++ E ++D++ + +G + V + + +
Sbjct: 86 GFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITE-RGALQEELARSFFWQVLEAVRH 144
Query: 406 LHQNNIIHRDLKAANLLMDENEVSLLL 432
H ++HRD+K N+L+D N L L
Sbjct: 145 CHNCGVLHRDIKDENILIDLNRGELKL 171
>pdb|3R00|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As
Potent Pim-1 Inhibitors
pdb|3R01|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As
Potent Pim-1 Inhibitors
pdb|3R02|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As
Potent Pim-1 Inhibitors
pdb|3R04|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As
Potent Pim-1 Inhibitors
pdb|3VBQ|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBT|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBV|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBW|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBX|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBY|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VC4|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
Length = 299
Score = 43.1 bits (100), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 35/147 (23%), Positives = 69/147 (46%), Gaps = 10/147 (6%)
Query: 295 KFGSKVASGSYGDLYRGTYCSQD--VAIKVLKPERINSDMQ----KEFAQEVFIMRKVR- 347
+ G + SG +G +Y G S + VAIK ++ +RI+ + EV +++KV
Sbjct: 12 QVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSS 71
Query: 348 -HKNVVQFIGACTKPPSLCIVTEFMSG-GSVYDYLHKLKGVFKLPSLLKVAIDVSKGMNY 405
V++ + +P S ++ E ++D++ + +G + V + + +
Sbjct: 72 GFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITE-RGALQEELARSFFWQVLEAVRH 130
Query: 406 LHQNNIIHRDLKAANLLMDENEVSLLL 432
H ++HRD+K N+L+D N L L
Sbjct: 131 CHNCGVLHRDIKDENILIDLNRGELKL 157
>pdb|3JXW|A Chain A, Discovery Of 3h-Benzo[4,5]thieno[3,2-D]pyrimidin-4-Ones As
Potent, Highly Selective And Orally Bioavailable Pim
Kinases Inhibitors
pdb|3JY0|A Chain A, Discovery Of 3h-Benzo[4,5]thieno[3,2-D]pyrimidin-4-Ones As
Potent, Highly Selective And Orally Bioavailable Pim
Kinases Inhibitors
pdb|3JYA|A Chain A, Discovery Of 3h-Benzo[4,5]thieno[3,2-D]pyrimidin-4-Ones As
Potent, Highly Selective And Orally Bioavailable Pim
Kinases Inhibitors
Length = 294
Score = 43.1 bits (100), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 35/147 (23%), Positives = 69/147 (46%), Gaps = 10/147 (6%)
Query: 295 KFGSKVASGSYGDLYRGTYCSQD--VAIKVLKPERINSDMQ----KEFAQEVFIMRKVR- 347
+ G + SG +G +Y G S + VAIK ++ +RI+ + EV +++KV
Sbjct: 12 QVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSS 71
Query: 348 -HKNVVQFIGACTKPPSLCIVTEFMSG-GSVYDYLHKLKGVFKLPSLLKVAIDVSKGMNY 405
V++ + +P S ++ E ++D++ + +G + V + + +
Sbjct: 72 GFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITE-RGALQEELARSFFWQVLEAVRH 130
Query: 406 LHQNNIIHRDLKAANLLMDENEVSLLL 432
H ++HRD+K N+L+D N L L
Sbjct: 131 CHNCGVLHRDIKDENILIDLNRGELKL 157
>pdb|3F2A|A Chain A, Crystal Structure Of Human Pim-1 In Complex With Dappa
Length = 300
Score = 43.1 bits (100), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 35/147 (23%), Positives = 69/147 (46%), Gaps = 10/147 (6%)
Query: 295 KFGSKVASGSYGDLYRGTYCSQD--VAIKVLKPERINSDMQ----KEFAQEVFIMRKVR- 347
+ G + SG +G +Y G S + VAIK ++ +RI+ + EV +++KV
Sbjct: 26 QVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSS 85
Query: 348 -HKNVVQFIGACTKPPSLCIVTEFMSG-GSVYDYLHKLKGVFKLPSLLKVAIDVSKGMNY 405
V++ + +P S ++ E ++D++ + +G + V + + +
Sbjct: 86 GFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITE-RGALQEELARSFFWQVLEAVRH 144
Query: 406 LHQNNIIHRDLKAANLLMDENEVSLLL 432
H ++HRD+K N+L+D N L L
Sbjct: 145 CHNCGVLHRDIKDENILIDLNRGELKL 171
>pdb|3UIX|A Chain A, Crystal Structure Of Pim1 Kinase In Complex With Small
Molecule Inhibitor
pdb|3UMX|A Chain A, Crystal Structure Of Pim1 Kinase In Complex With Inhibitor
(Z)-2-[(1h-
Indol-3-Yl)methylene]-7-(Azepan-1-Ylmethyl)-6-
Hydroxybenzofuran- 3(2h)-One
pdb|4ENX|A Chain A, Crystal Structure Of Pim-1 Kinase In Complex With
Inhibitor (2e,5z)-2-
(2-Chlorophenylimino)-5-(4-Hydroxy-3-
Nitrobenzylidene)thiazolidin-4- One
pdb|4ENY|A Chain A, Crystal Structure Of Pim-1 Kinase In Complex With
(2e,5z)-2-(2-
Chlorophenylimino)-5-(4-Hydroxy-3-
Methoxybenzylidene)thiazolidin-4- One
pdb|3UMW|A Chain A, Crystal Structure Of Pim1 Kinase In Complex With Inhibitor
(Z)-2-[(1h-
Indazol-3-Yl)methylene]-6-Methoxy-7-(Piperazin-1-
Ylmethyl)benzofuran- 3(2h)-One
Length = 298
Score = 43.1 bits (100), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 35/147 (23%), Positives = 69/147 (46%), Gaps = 10/147 (6%)
Query: 295 KFGSKVASGSYGDLYRGTYCSQD--VAIKVLKPERINSDMQ----KEFAQEVFIMRKVR- 347
+ G + SG +G +Y G S + VAIK ++ +RI+ + EV +++KV
Sbjct: 12 QVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSS 71
Query: 348 -HKNVVQFIGACTKPPSLCIVTEFMSG-GSVYDYLHKLKGVFKLPSLLKVAIDVSKGMNY 405
V++ + +P S ++ E ++D++ + +G + V + + +
Sbjct: 72 GFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITE-RGALQEELARSFFWQVLEAVRH 130
Query: 406 LHQNNIIHRDLKAANLLMDENEVSLLL 432
H ++HRD+K N+L+D N L L
Sbjct: 131 CHNCGVLHRDIKDENILIDLNRGELKL 157
>pdb|2XIX|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-1 From
Crystallographic Fragment Screen
Length = 301
Score = 43.1 bits (100), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 35/147 (23%), Positives = 69/147 (46%), Gaps = 10/147 (6%)
Query: 295 KFGSKVASGSYGDLYRGTYCSQD--VAIKVLKPERINSDMQ----KEFAQEVFIMRKVR- 347
+ G + SG +G +Y G S + VAIK ++ +RI+ + EV +++KV
Sbjct: 27 QVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSS 86
Query: 348 -HKNVVQFIGACTKPPSLCIVTEFMSG-GSVYDYLHKLKGVFKLPSLLKVAIDVSKGMNY 405
V++ + +P S ++ E ++D++ + +G + V + + +
Sbjct: 87 GFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITE-RGALQEELARSFFWQVLEAVRH 145
Query: 406 LHQNNIIHRDLKAANLLMDENEVSLLL 432
H ++HRD+K N+L+D N L L
Sbjct: 146 CHNCGVLHRDIKDENILIDLNRGELKL 172
>pdb|2XIY|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-2 From
Crystallographic Fragment Screen
pdb|2XIZ|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-3 From
Crystallographic Fragment Screen
pdb|2XJ1|A Chain A, Protein Kinase Pim-1 In Complex With Small Molecule
Inibitor
pdb|2XJ2|A Chain A, Protein Kinase Pim-1 In Complex With Small Molecule
Inhibitor
Length = 301
Score = 43.1 bits (100), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 35/147 (23%), Positives = 69/147 (46%), Gaps = 10/147 (6%)
Query: 295 KFGSKVASGSYGDLYRGTYCSQD--VAIKVLKPERINSDMQ----KEFAQEVFIMRKVR- 347
+ G + SG +G +Y G S + VAIK ++ +RI+ + EV +++KV
Sbjct: 27 QVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSS 86
Query: 348 -HKNVVQFIGACTKPPSLCIVTEFMSG-GSVYDYLHKLKGVFKLPSLLKVAIDVSKGMNY 405
V++ + +P S ++ E ++D++ + +G + V + + +
Sbjct: 87 GFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITE-RGALQEELARSFFWQVLEAVRH 145
Query: 406 LHQNNIIHRDLKAANLLMDENEVSLLL 432
H ++HRD+K N+L+D N L L
Sbjct: 146 CHNCGVLHRDIKDENILIDLNRGELKL 172
>pdb|2XJ0|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-4 From
Crystallographic Fragment Screen
Length = 301
Score = 43.1 bits (100), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 35/147 (23%), Positives = 69/147 (46%), Gaps = 10/147 (6%)
Query: 295 KFGSKVASGSYGDLYRGTYCSQD--VAIKVLKPERINSDMQ----KEFAQEVFIMRKVR- 347
+ G + SG +G +Y G S + VAIK ++ +RI+ + EV +++KV
Sbjct: 27 QVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSS 86
Query: 348 -HKNVVQFIGACTKPPSLCIVTEFMSG-GSVYDYLHKLKGVFKLPSLLKVAIDVSKGMNY 405
V++ + +P S ++ E ++D++ + +G + V + + +
Sbjct: 87 GFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITE-RGALQEELARSFFWQVLEAVRH 145
Query: 406 LHQNNIIHRDLKAANLLMDENEVSLLL 432
H ++HRD+K N+L+D N L L
Sbjct: 146 CHNCGVLHRDIKDENILIDLNRGELKL 172
>pdb|3JPV|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Pyrrolo[2,3- A]carbazole Ligand
pdb|3QF9|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Furan- Thiazolidinedione Ligand
pdb|4GW8|A Chain A, Human Proto-Oncogene Serine Threonine Kinase (Pim1) In
Complex With A Consensus Peptide And Leucettine L41
Length = 313
Score = 43.1 bits (100), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 35/147 (23%), Positives = 69/147 (46%), Gaps = 10/147 (6%)
Query: 295 KFGSKVASGSYGDLYRGTYCSQD--VAIKVLKPERINSDMQ----KEFAQEVFIMRKVR- 347
+ G + SG +G +Y G S + VAIK ++ +RI+ + EV +++KV
Sbjct: 40 QVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSS 99
Query: 348 -HKNVVQFIGACTKPPSLCIVTEFMSG-GSVYDYLHKLKGVFKLPSLLKVAIDVSKGMNY 405
V++ + +P S ++ E ++D++ + +G + V + + +
Sbjct: 100 GFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITE-RGALQEELARSFFWQVLEAVRH 158
Query: 406 LHQNNIIHRDLKAANLLMDENEVSLLL 432
H ++HRD+K N+L+D N L L
Sbjct: 159 CHNCGVLHRDIKDENILIDLNRGELKL 185
>pdb|3MA3|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Naphtho-Difuran Ligand
Length = 313
Score = 43.1 bits (100), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 35/147 (23%), Positives = 69/147 (46%), Gaps = 10/147 (6%)
Query: 295 KFGSKVASGSYGDLYRGTYCSQD--VAIKVLKPERINSDMQ----KEFAQEVFIMRKVR- 347
+ G + SG +G +Y G S + VAIK ++ +RI+ + EV +++KV
Sbjct: 40 QVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSS 99
Query: 348 -HKNVVQFIGACTKPPSLCIVTEFMSG-GSVYDYLHKLKGVFKLPSLLKVAIDVSKGMNY 405
V++ + +P S ++ E ++D++ + +G + V + + +
Sbjct: 100 GFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITE-RGALQEELARSFFWQVLEAVRH 158
Query: 406 LHQNNIIHRDLKAANLLMDENEVSLLL 432
H ++HRD+K N+L+D N L L
Sbjct: 159 CHNCGVLHRDIKDENILIDLNRGELKL 185
>pdb|2J2I|B Chain B, Crystal Structure Of The Humab Pim1 In Complex With
Ly333531
Length = 312
Score = 43.1 bits (100), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 35/147 (23%), Positives = 69/147 (46%), Gaps = 10/147 (6%)
Query: 295 KFGSKVASGSYGDLYRGTYCSQD--VAIKVLKPERINSDMQ----KEFAQEVFIMRKVR- 347
+ G + SG +G +Y G S + VAIK ++ +RI+ + EV +++KV
Sbjct: 39 QVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSS 98
Query: 348 -HKNVVQFIGACTKPPSLCIVTEFMSG-GSVYDYLHKLKGVFKLPSLLKVAIDVSKGMNY 405
V++ + +P S ++ E ++D++ + +G + V + + +
Sbjct: 99 GFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITE-RGALQEELARSFFWQVLEAVRH 157
Query: 406 LHQNNIIHRDLKAANLLMDENEVSLLL 432
H ++HRD+K N+L+D N L L
Sbjct: 158 CHNCGVLHRDIKDENILIDLNRGELKL 184
>pdb|4DTK|A Chain A, Novel And Selective Pan-Pim Kinase Inhibitor
Length = 276
Score = 43.1 bits (100), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 35/147 (23%), Positives = 69/147 (46%), Gaps = 10/147 (6%)
Query: 295 KFGSKVASGSYGDLYRGTYCSQD--VAIKVLKPERINSDMQ----KEFAQEVFIMRKVR- 347
+ G + SG +G +Y G S + VAIK ++ +RI+ + EV +++KV
Sbjct: 10 QVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSS 69
Query: 348 -HKNVVQFIGACTKPPSLCIVTEFMSG-GSVYDYLHKLKGVFKLPSLLKVAIDVSKGMNY 405
V++ + +P S ++ E ++D++ + +G + V + + +
Sbjct: 70 GFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITE-RGALQEELARSFFWQVLEAVRH 128
Query: 406 LHQNNIIHRDLKAANLLMDENEVSLLL 432
H ++HRD+K N+L+D N L L
Sbjct: 129 CHNCGVLHRDIKDENILIDLNRGELKL 155
>pdb|1XWS|A Chain A, Crystal Structure Of The Human Pim1 Kinase Domain
Length = 313
Score = 43.1 bits (100), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 35/147 (23%), Positives = 69/147 (46%), Gaps = 10/147 (6%)
Query: 295 KFGSKVASGSYGDLYRGTYCSQD--VAIKVLKPERINSDMQ----KEFAQEVFIMRKVR- 347
+ G + SG +G +Y G S + VAIK ++ +RI+ + EV +++KV
Sbjct: 39 QVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSS 98
Query: 348 -HKNVVQFIGACTKPPSLCIVTEFMSG-GSVYDYLHKLKGVFKLPSLLKVAIDVSKGMNY 405
V++ + +P S ++ E ++D++ + +G + V + + +
Sbjct: 99 GFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITE-RGALQEELARSFFWQVLEAVRH 157
Query: 406 LHQNNIIHRDLKAANLLMDENEVSLLL 432
H ++HRD+K N+L+D N L L
Sbjct: 158 CHNCGVLHRDIKDENILIDLNRGELKL 184
>pdb|4AS0|A Chain A, Cyclometalated Phthalimides As Protein Kinase Inhibitors
Length = 273
Score = 43.1 bits (100), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 35/147 (23%), Positives = 69/147 (46%), Gaps = 10/147 (6%)
Query: 295 KFGSKVASGSYGDLYRGTYCSQD--VAIKVLKPERINSDMQ----KEFAQEVFIMRKVR- 347
+ G + SG +G +Y G S + VAIK ++ +RI+ + EV +++KV
Sbjct: 7 QVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSS 66
Query: 348 -HKNVVQFIGACTKPPSLCIVTEFMSG-GSVYDYLHKLKGVFKLPSLLKVAIDVSKGMNY 405
V++ + +P S ++ E ++D++ + +G + V + + +
Sbjct: 67 GFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITE-RGALQEELARSFFWQVLEAVRH 125
Query: 406 LHQNNIIHRDLKAANLLMDENEVSLLL 432
H ++HRD+K N+L+D N L L
Sbjct: 126 CHNCGVLHRDIKDENILIDLNRGELKL 152
>pdb|3C4E|A Chain A, Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7-
Azaindole
pdb|3C4E|B Chain B, Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7-
Azaindole
pdb|3C4E|C Chain C, Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7-
Azaindole
pdb|3C4E|D Chain D, Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7-
Azaindole
Length = 273
Score = 43.1 bits (100), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 35/147 (23%), Positives = 69/147 (46%), Gaps = 10/147 (6%)
Query: 295 KFGSKVASGSYGDLYRGTYCSQD--VAIKVLKPERINSDMQ----KEFAQEVFIMRKVR- 347
+ G + SG +G +Y G S + VAIK ++ +RI+ + EV +++KV
Sbjct: 7 QVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSS 66
Query: 348 -HKNVVQFIGACTKPPSLCIVTEFMSG-GSVYDYLHKLKGVFKLPSLLKVAIDVSKGMNY 405
V++ + +P S ++ E ++D++ + +G + V + + +
Sbjct: 67 GFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITE-RGALQEELARSFFWQVLEAVRH 125
Query: 406 LHQNNIIHRDLKAANLLMDENEVSLLL 432
H ++HRD+K N+L+D N L L
Sbjct: 126 CHNCGVLHRDIKDENILIDLNRGELKL 152
>pdb|3FME|A Chain A, Crystal Structure Of Human Mitogen-Activated Protein
Kinase Kinase 6 (Mek6) Activated Mutant (S207d, T211d)
Length = 290
Score = 42.7 bits (99), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 37/132 (28%), Positives = 64/132 (48%), Gaps = 7/132 (5%)
Query: 299 KVASGSYG--DLYRGTYCSQDVAIKVLKPERINSDMQKEFAQEVFI-MRKVRHKNVVQFI 355
++ G+YG + R Q +A+K ++ +NS QK ++ I MR V V F
Sbjct: 14 ELGRGAYGVVEKMRHVPSGQIMAVKRIR-ATVNSQEQKRLLMDLDISMRTVDCPFTVTFY 72
Query: 356 GACTKPPSLCIVTEFMSGGSVYDYLHKLKGVFKLPS--LLKVAIDVSKGMNYLHQN-NII 412
GA + + I E M Y + +P L K+A+ + K + +LH ++I
Sbjct: 73 GALFREGDVWICMELMDTSLDKFYKQVIDKGQTIPEDILGKIAVSIVKALEHLHSKLSVI 132
Query: 413 HRDLKAANLLMD 424
HRD+K +N+L++
Sbjct: 133 HRDVKPSNVLIN 144
>pdb|2BIK|B Chain B, Human Pim1 Phosphorylated On Ser261
pdb|2BZI|B Chain B, Crystal Structure Of The Human Pim1 In Complex With A
Ruthenium Organometallic Ligand Ru2
Length = 313
Score = 42.7 bits (99), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 35/147 (23%), Positives = 69/147 (46%), Gaps = 10/147 (6%)
Query: 295 KFGSKVASGSYGDLYRGTYCSQD--VAIKVLKPERINSDMQ----KEFAQEVFIMRKVR- 347
+ G + SG +G +Y G S + VAIK ++ +RI+ + EV +++KV
Sbjct: 39 QVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSS 98
Query: 348 -HKNVVQFIGACTKPPSLCIVTEFMSG-GSVYDYLHKLKGVFKLPSLLKVAIDVSKGMNY 405
V++ + +P S ++ E ++D++ + +G + V + + +
Sbjct: 99 GFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITE-RGALQEELARSFFWQVLEAVRH 157
Query: 406 LHQNNIIHRDLKAANLLMDENEVSLLL 432
H ++HRD+K N+L+D N L L
Sbjct: 158 CHNCGVLHRDIKDENILIDLNRGELKL 184
>pdb|2BIL|B Chain B, The Human Protein Kinase Pim1 In Complex With Its
Consensus Peptide Pimtide
pdb|2BZJ|A Chain A, Crystal Structure Of The Human Pim1 In Complex With A
Ruthenium Organometallic Ligand Ru3
pdb|2BZK|B Chain B, Crystal Structure Of The Human Pim1 In Complex With Amppnp
And Pimtide
pdb|2C3I|B Chain B, Crystal Structure Of Human Pim1 In Complex With
Imidazopyridazin I
pdb|2BZH|B Chain B, Crystal Structure Of The Human Pim1 In Complex With A
Ruthenium Organometallic Ligand Ru1
pdb|2OI4|X Chain X, Crystal Structure Of Human Pim1 In Complex With
Fluorinated Ruthenium Pyridocarbazole
pdb|3BWF|A Chain A, Crystal Structure Of The Human Pim1 In Complex With An
Osmium Compound
Length = 313
Score = 42.7 bits (99), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 35/147 (23%), Positives = 69/147 (46%), Gaps = 10/147 (6%)
Query: 295 KFGSKVASGSYGDLYRGTYCSQD--VAIKVLKPERINSDMQ----KEFAQEVFIMRKVR- 347
+ G + SG +G +Y G S + VAIK ++ +RI+ + EV +++KV
Sbjct: 39 QVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSS 98
Query: 348 -HKNVVQFIGACTKPPSLCIVTEFMSG-GSVYDYLHKLKGVFKLPSLLKVAIDVSKGMNY 405
V++ + +P S ++ E ++D++ + +G + V + + +
Sbjct: 99 GFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITE-RGALQEELARSFFWQVLEAVRH 157
Query: 406 LHQNNIIHRDLKAANLLMDENEVSLLL 432
H ++HRD+K N+L+D N L L
Sbjct: 158 CHNCGVLHRDIKDENILIDLNRGELKL 184
>pdb|4B99|A Chain A, Crystal Structure Of Mapk7 (Erk5) With Inhibitor
Length = 398
Score = 42.7 bits (99), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 36/135 (26%), Positives = 65/135 (48%), Gaps = 10/135 (7%)
Query: 300 VASGSYGDL--YRGTYCSQDVAIKVLKPERINSDMQKEFAQEVFIMRKVRHKNVVQF--I 355
+ +G+YG + R Q VAIK + K +E+ I++ +H N++ I
Sbjct: 62 IGNGAYGVVSSARRRLTGQQVAIKKIPNAFDVVTNAKRTLRELKILKHFKHDNIIAIKDI 121
Query: 356 GACTKP----PSLCIVTEFMSGGSVYDYLHKLKGVFKLPSLLKVAIDVSKGMNYLHQNNI 411
T P S+ +V + M ++ +H + + L + + +G+ Y+H +
Sbjct: 122 LRPTVPYGEFKSVYVVLDLMES-DLHQIIHSSQPL-TLEHVRYFLYQLLRGLKYMHSAQV 179
Query: 412 IHRDLKAANLLMDEN 426
IHRDLK +NLL++EN
Sbjct: 180 IHRDLKPSNLLVNEN 194
>pdb|3CY3|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And
The Jnk Inhibitor V
Length = 314
Score = 42.7 bits (99), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 35/147 (23%), Positives = 69/147 (46%), Gaps = 10/147 (6%)
Query: 295 KFGSKVASGSYGDLYRGTYCSQD--VAIKVLKPERINSDMQ----KEFAQEVFIMRKVR- 347
+ G + SG +G +Y G S + VAIK ++ +RI+ + EV +++KV
Sbjct: 40 QVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSS 99
Query: 348 -HKNVVQFIGACTKPPSLCIVTEFMSG-GSVYDYLHKLKGVFKLPSLLKVAIDVSKGMNY 405
V++ + +P S ++ E ++D++ + +G + V + + +
Sbjct: 100 GFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITE-RGALQEELARSFFWQVLEAVRH 158
Query: 406 LHQNNIIHRDLKAANLLMDENEVSLLL 432
H ++HRD+K N+L+D N L L
Sbjct: 159 CHNCGVLHRDIKDENILIDLNRGELKL 185
>pdb|3CXW|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Beta Carboline Ligand I
pdb|3CY2|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Beta Carboline Ligand Ii
Length = 314
Score = 42.7 bits (99), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 35/147 (23%), Positives = 69/147 (46%), Gaps = 10/147 (6%)
Query: 295 KFGSKVASGSYGDLYRGTYCSQD--VAIKVLKPERINSDMQ----KEFAQEVFIMRKVR- 347
+ G + SG +G +Y G S + VAIK ++ +RI+ + EV +++KV
Sbjct: 40 QVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSS 99
Query: 348 -HKNVVQFIGACTKPPSLCIVTEFMSG-GSVYDYLHKLKGVFKLPSLLKVAIDVSKGMNY 405
V++ + +P S ++ E ++D++ + +G + V + + +
Sbjct: 100 GFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITE-RGALQEELARSFFWQVLEAVRH 158
Query: 406 LHQNNIIHRDLKAANLLMDENEVSLLL 432
H ++HRD+K N+L+D N L L
Sbjct: 159 CHNCGVLHRDIKDENILIDLNRGELKL 185
>pdb|4A7C|A Chain A, Crystal Structure Of Pim1 Kinase With Etp46546
Length = 308
Score = 42.7 bits (99), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 35/147 (23%), Positives = 69/147 (46%), Gaps = 10/147 (6%)
Query: 295 KFGSKVASGSYGDLYRGTYCSQD--VAIKVLKPERINSDMQ----KEFAQEVFIMRKVR- 347
+ G + SG +G +Y G S + VAIK ++ +RI+ + EV +++KV
Sbjct: 34 QVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSS 93
Query: 348 -HKNVVQFIGACTKPPSLCIVTEFMSG-GSVYDYLHKLKGVFKLPSLLKVAIDVSKGMNY 405
V++ + +P S ++ E ++D++ + +G + V + + +
Sbjct: 94 GFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITE-RGALQEELARSFFWQVLEAVRH 152
Query: 406 LHQNNIIHRDLKAANLLMDENEVSLLL 432
H ++HRD+K N+L+D N L L
Sbjct: 153 CHNCGVLHRDIKDENILIDLNRGELKL 179
>pdb|3DCV|A Chain A, Crystal Structure Of Human Pim1 Kinase Complexed With
4-(4-
Hydroxy-3-Methyl-Phenyl)-6-Phenylpyrimidin-2(1h)-One
pdb|3T9I|A Chain A, Pim1 Complexed With A Novel 3,6-Disubstituted Indole At
2.6 Ang Resolution
Length = 328
Score = 42.7 bits (99), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 35/147 (23%), Positives = 69/147 (46%), Gaps = 10/147 (6%)
Query: 295 KFGSKVASGSYGDLYRGTYCSQD--VAIKVLKPERINSDMQ----KEFAQEVFIMRKVR- 347
+ G + SG +G +Y G S + VAIK ++ +RI+ + EV +++KV
Sbjct: 54 QVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSS 113
Query: 348 -HKNVVQFIGACTKPPSLCIVTEFMSG-GSVYDYLHKLKGVFKLPSLLKVAIDVSKGMNY 405
V++ + +P S ++ E ++D++ + +G + V + + +
Sbjct: 114 GFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITE-RGALQEELARSFFWQVLEAVRH 172
Query: 406 LHQNNIIHRDLKAANLLMDENEVSLLL 432
H ++HRD+K N+L+D N L L
Sbjct: 173 CHNCGVLHRDIKDENILIDLNRGELKL 199
>pdb|3A99|A Chain A, Structure Of Pim-1 Kinase Crystallized In The Presence Of
P27kip1 Carboxy-Terminal Peptide
Length = 320
Score = 42.7 bits (99), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 35/147 (23%), Positives = 69/147 (46%), Gaps = 10/147 (6%)
Query: 295 KFGSKVASGSYGDLYRGTYCSQD--VAIKVLKPERINSDMQ----KEFAQEVFIMRKVR- 347
+ G + SG +G +Y G S + VAIK ++ +RI+ + EV +++KV
Sbjct: 46 QVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSS 105
Query: 348 -HKNVVQFIGACTKPPSLCIVTEFMSG-GSVYDYLHKLKGVFKLPSLLKVAIDVSKGMNY 405
V++ + +P S ++ E ++D++ + +G + V + + +
Sbjct: 106 GFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITE-RGALQEELARSFFWQVLEAVRH 164
Query: 406 LHQNNIIHRDLKAANLLMDENEVSLLL 432
H ++HRD+K N+L+D N L L
Sbjct: 165 CHNCGVLHRDIKDENILIDLNRGELKL 191
>pdb|4ALV|A Chain A, Benzofuropyrimidinone Inhibitors Of Pim-1
pdb|4ALW|A Chain A, Benzofuropyrimidinone Inhibitors Of Pim-1
Length = 328
Score = 42.7 bits (99), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 35/147 (23%), Positives = 69/147 (46%), Gaps = 10/147 (6%)
Query: 295 KFGSKVASGSYGDLYRGTYCSQD--VAIKVLKPERINSDMQ----KEFAQEVFIMRKVR- 347
+ G + SG +G +Y G S + VAIK ++ +RI+ + EV +++KV
Sbjct: 54 QVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSS 113
Query: 348 -HKNVVQFIGACTKPPSLCIVTEFMSG-GSVYDYLHKLKGVFKLPSLLKVAIDVSKGMNY 405
V++ + +P S ++ E ++D++ + +G + V + + +
Sbjct: 114 GFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITE-RGALQEELARSFFWQVLEAVRH 172
Query: 406 LHQNNIIHRDLKAANLLMDENEVSLLL 432
H ++HRD+K N+L+D N L L
Sbjct: 173 CHNCGVLHRDIKDENILIDLNRGELKL 199
>pdb|2W99|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
pdb|2W9Z|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 42.7 bits (99), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 51/211 (24%), Positives = 91/211 (43%), Gaps = 29/211 (13%)
Query: 298 SKVASGSYGDLY--RGTYCSQDVAIKVLKPERINSDMQKEFAQEVFIMRKVR---HKNVV 352
+++ G+YG +Y R + VA+K ++ + +EV ++R++ H NVV
Sbjct: 10 AEIGVGAYGTVYKARDPHSGHFVALKSVRVPNGEEGLPISTVREVALLRRLEAFEHPNVV 69
Query: 353 QFIGACT-----KPPSLCIVTEFMSGGSVYDYLHKLKGVFKLP--SLLKVAIDVSKGMNY 405
+ + C + + +V E + + YL K LP ++ + +G+++
Sbjct: 70 RLMDVCATSRTDREIKVTLVFEHVDQ-DLRTYLDKAPPP-GLPAETIKDLMRQFLRGLDF 127
Query: 406 LHQNNIIHRDLKAANLLMDENEVSLLLSLCLFTVSILFCGKGRELISL-FLGNDVLLQFG 464
LH N I+HRDLK N+L+ L L + +++L + +VLLQ
Sbjct: 128 LHANCIVHRDLKPENILVTSGGTVKLADFGLARIYSYQMALAPVVVTLWYRAPEVLLQ-S 186
Query: 465 TY------WII-------FRRSSCDKKNSDA 482
TY W + FRR NS+A
Sbjct: 187 TYATPVDMWSVGCIFAEMFRRKPLFCGNSEA 217
>pdb|2OBJ|A Chain A, Crystal Structure Of Human Pim-1 Kinase In Complex With
Inhibitor
pdb|3BGP|A Chain A, Human Pim-1 Complexed With A Benzoisoxazole Inhibitor Vx1
pdb|3BGQ|A Chain A, Human Pim-1 Kinase In Complex With An Triazolo Pyridazine
Inhibitor Vx2
pdb|3BGZ|A Chain A, Human Pim-1 Kinase In Complex With Diphenyl Indole
Inhibitor Vx3
Length = 333
Score = 42.7 bits (99), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 35/147 (23%), Positives = 69/147 (46%), Gaps = 10/147 (6%)
Query: 295 KFGSKVASGSYGDLYRGTYCSQD--VAIKVLKPERINSDMQ----KEFAQEVFIMRKVR- 347
+ G + SG +G +Y G S + VAIK ++ +RI+ + EV +++KV
Sbjct: 59 QVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSS 118
Query: 348 -HKNVVQFIGACTKPPSLCIVTEFMSG-GSVYDYLHKLKGVFKLPSLLKVAIDVSKGMNY 405
V++ + +P S ++ E ++D++ + +G + V + + +
Sbjct: 119 GFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITE-RGALQEELARSFFWQVLEAVRH 177
Query: 406 LHQNNIIHRDLKAANLLMDENEVSLLL 432
H ++HRD+K N+L+D N L L
Sbjct: 178 CHNCGVLHRDIKDENILIDLNRGELKL 204
>pdb|4G3C|A Chain A, Crystal Structure Of Apo Murine Nf-kappab Inducing Kinase
(nik)
pdb|4G3C|B Chain B, Crystal Structure Of Apo Murine Nf-kappab Inducing Kinase
(nik)
pdb|4G3E|A Chain A, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) Bound To A 6-alkynylindoline (cmp1)
pdb|4G3E|B Chain B, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) Bound To A 6-alkynylindoline (cmp1)
Length = 352
Score = 42.7 bits (99), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 33/135 (24%), Positives = 60/135 (44%), Gaps = 20/135 (14%)
Query: 299 KVASGSYGDLYR------GTYCS-QDVAIKVLKPERINSDMQKEFAQEVFIMRKVRHKNV 351
+V GS+G+++R G C+ + V ++V + E E+ + +
Sbjct: 81 RVGRGSFGEVHRMKDKQTGFQCAVKKVRLEVFRVE------------ELVACAGLSSPRI 128
Query: 352 VQFIGACTKPPSLCIVTEFMSGGSVYDYLHKLKGVFKLPSLLKVAIDVSKGMNYLHQNNI 411
V GA + P + I E + GGS+ + ++ G L +G+ YLH I
Sbjct: 129 VPLYGAVREGPWVNIFMELLEGGSLGQLIKQM-GCLPEDRALYYLGQALEGLEYLHTRRI 187
Query: 412 IHRDLKAANLLMDEN 426
+H D+KA N+L+ +
Sbjct: 188 LHGDVKADNVLLSSD 202
>pdb|4G3F|A Chain A, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) Bound To A 2-(aminothiazoly)phenol (cmp2)
Length = 336
Score = 42.7 bits (99), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 33/135 (24%), Positives = 60/135 (44%), Gaps = 20/135 (14%)
Query: 299 KVASGSYGDLYR------GTYCS-QDVAIKVLKPERINSDMQKEFAQEVFIMRKVRHKNV 351
+V GS+G+++R G C+ + V ++V + E E+ + +
Sbjct: 65 RVGRGSFGEVHRMKDKQTGFQCAVKKVRLEVFRVE------------ELVACAGLSSPRI 112
Query: 352 VQFIGACTKPPSLCIVTEFMSGGSVYDYLHKLKGVFKLPSLLKVAIDVSKGMNYLHQNNI 411
V GA + P + I E + GGS+ + ++ G L +G+ YLH I
Sbjct: 113 VPLYGAVREGPWVNIFMELLEGGSLGQLIKQM-GCLPEDRALYYLGQALEGLEYLHTRRI 171
Query: 412 IHRDLKAANLLMDEN 426
+H D+KA N+L+ +
Sbjct: 172 LHGDVKADNVLLSSD 186
>pdb|4IC7|A Chain A, Crystal Structure Of The Erk5 Kinase Domain In Complex
With An Mkk5 Binding Fragment
pdb|4IC7|D Chain D, Crystal Structure Of The Erk5 Kinase Domain In Complex
With An Mkk5 Binding Fragment
pdb|4IC8|A Chain A, Crystal Structure Of The Apo Erk5 Kinase Domain
pdb|4IC8|B Chain B, Crystal Structure Of The Apo Erk5 Kinase Domain
Length = 442
Score = 42.7 bits (99), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 36/135 (26%), Positives = 65/135 (48%), Gaps = 10/135 (7%)
Query: 300 VASGSYGDL--YRGTYCSQDVAIKVLKPERINSDMQKEFAQEVFIMRKVRHKNVVQF--I 355
+ +G+YG + R Q VAIK + K +E+ I++ +H N++ I
Sbjct: 63 IGNGAYGVVSSARRRLTGQQVAIKKIPNAFDVVTNAKRTLRELKILKHFKHDNIIAIKDI 122
Query: 356 GACTKP----PSLCIVTEFMSGGSVYDYLHKLKGVFKLPSLLKVAIDVSKGMNYLHQNNI 411
T P S+ +V + M ++ +H + + L + + +G+ Y+H +
Sbjct: 123 LRPTVPYGEFKSVYVVLDLMES-DLHQIIHSSQPL-TLEHVRYFLYQLLRGLKYMHSAQV 180
Query: 412 IHRDLKAANLLMDEN 426
IHRDLK +NLL++EN
Sbjct: 181 IHRDLKPSNLLVNEN 195
>pdb|3PFQ|A Chain A, Crystal Structure And Allosteric Activation Of Protein
Kinase C Beta Ii
Length = 674
Score = 42.4 bits (98), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 30/129 (23%), Positives = 63/129 (48%), Gaps = 5/129 (3%)
Query: 300 VASGSYGDLYRGTYCSQD--VAIKVLKPERI--NSDMQKEFAQEVFIMRKVRHKNVVQFI 355
+ GS+G + D A+K+LK + + + D++ ++ + + + Q
Sbjct: 349 LGKGSFGKVMLSERKGTDELYAVKILKKDVVIQDDDVECTMVEKRVLALPGKPPFLTQLH 408
Query: 356 GACTKPPSLCIVTEFMSGGSVYDYLHKLKGVFKLPSLLKVAIDVSKGMNYLHQNNIIHRD 415
L V E+++GG + ++ ++ G FK P + A +++ G+ +L II+RD
Sbjct: 409 SCFQTMDRLYFVMEYVNGGDLMYHIQQV-GRFKEPHAVFYAAEIAIGLFFLQSKGIIYRD 467
Query: 416 LKAANLLMD 424
LK N+++D
Sbjct: 468 LKLDNVMLD 476
>pdb|2VZ6|A Chain A, Structure Of Human Calcium Calmodulin Dependent Protein
Kinase Type Ii Alpha (Camk2a) In Complex With Indirubin
E804
pdb|2VZ6|B Chain B, Structure Of Human Calcium Calmodulin Dependent Protein
Kinase Type Ii Alpha (Camk2a) In Complex With Indirubin
E804
Length = 313
Score = 42.4 bits (98), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 26/133 (19%), Positives = 64/133 (48%), Gaps = 13/133 (9%)
Query: 315 SQDVAIKVLKPERINSDMQKEFAQEVFIMRKVRHKNVVQFIGACTKPPSLCIVTEFMSGG 374
Q+ A K++ +++++ ++ +E I R ++H N+V+ + ++ ++ + ++GG
Sbjct: 47 GQEYAAKIINTKKLSARDHQKLEREARICRLLKHPNIVRLHDSISEEGHHYLIFDLVTGG 106
Query: 375 SVY------DYLHKLKGVFKLPSLLKVAIDVSKGMNYLHQNNIIHRDLKAANLLMDENEV 428
++ +Y + + +L+ + + HQ ++HRDLK NLL+
Sbjct: 107 ELFEDIVAREYYSEADASHCIQQILEAVL-------HCHQMGVVHRDLKPENLLLASKLK 159
Query: 429 SLLLSLCLFTVSI 441
+ L F ++I
Sbjct: 160 GAAVKLADFGLAI 172
>pdb|2I0E|A Chain A, Structure Of Catalytic Domain Of Human Protein Kinase C
Beta Ii Complexed With A Bisindolylmaleimide Inhibitor
pdb|2I0E|B Chain B, Structure Of Catalytic Domain Of Human Protein Kinase C
Beta Ii Complexed With A Bisindolylmaleimide Inhibitor
Length = 353
Score = 42.4 bits (98), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 30/129 (23%), Positives = 63/129 (48%), Gaps = 5/129 (3%)
Query: 300 VASGSYGDLYRGTYCSQD--VAIKVLKPERI--NSDMQKEFAQEVFIMRKVRHKNVVQFI 355
+ GS+G + D A+K+LK + + + D++ ++ + + + Q
Sbjct: 28 LGKGSFGKVMLSERKGTDELYAVKILKKDVVIQDDDVECTMVEKRVLALPGKPPFLTQLH 87
Query: 356 GACTKPPSLCIVTEFMSGGSVYDYLHKLKGVFKLPSLLKVAIDVSKGMNYLHQNNIIHRD 415
L V E+++GG + ++ ++ G FK P + A +++ G+ +L II+RD
Sbjct: 88 SCFQTMDRLYFVMEYVNGGDLMYHIQQV-GRFKEPHAVFYAAEIAIGLFFLQSKGIIYRD 146
Query: 416 LKAANLLMD 424
LK N+++D
Sbjct: 147 LKLDNVMLD 155
>pdb|2ZOQ|A Chain A, Structural Dissection Of Human Mitogen-Activated Kinase
Erk1
pdb|2ZOQ|B Chain B, Structural Dissection Of Human Mitogen-Activated Kinase
Erk1
Length = 382
Score = 42.4 bits (98), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 43/167 (25%), Positives = 80/167 (47%), Gaps = 27/167 (16%)
Query: 287 WEIDPKHLKFGSKVASGSYG------DLYRGTYCSQDVAIKVLKPERINSDMQKEFAQEV 340
+++ P++ + + G+YG D R T VAIK + P + Q+ +E+
Sbjct: 39 FDVGPRYTQL-QYIGEGAYGMVSSAYDHVRKT----RVAIKKISPFEHQTYCQRTL-REI 92
Query: 341 FIMRKVRHKNVV---QFIGACTKPP--SLCIVTEFMSGGSVYDYLHKLKGVFKLPS--LL 393
I+ + RH+NV+ + A T + IV + M L+KL +L + +
Sbjct: 93 QILLRFRHENVIGIRDILRASTLEAMRDVYIVQDLMETD-----LYKLLKSQQLSNDHIC 147
Query: 394 KVAIDVSKGMNYLHQNNIIHRDLKAANLLMDENEVSLLLSLCLFTVS 440
+ +G+ Y+H N++HRDLK +NLL++ + L +C F ++
Sbjct: 148 YFLYQILRGLKYIHSANVLHRDLKPSNLLIN---TTCDLKICDFGLA 191
>pdb|3VUM|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M7 In Map
Kinase Jnk1
Length = 370
Score = 42.4 bits (98), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 38/155 (24%), Positives = 64/155 (41%), Gaps = 32/155 (20%)
Query: 300 VASGSYGDLYRG--TYCSQDVAIKVLKPERINSDMQKEFAQEVFIMRKVRHKNVVQFIGA 357
+ SG+ G + ++VAIK L N K +E+ +M+ V HKN++ +
Sbjct: 32 IGSGAQGIVVAAYDAILERNVAIKKLSRPFQNQTHAKRAYRELVLMKVVNHKNIIGLLNV 91
Query: 358 CTKPPSL------CIVTEFMSGGSVYDYLHKLKGVFKLPSLLKVAIDVSK---------- 401
T SL IV E M L ++++ +D +
Sbjct: 92 FTPQKSLEEFQDVYIVMELMDAN--------------LSQVIQMELDHERMSYLLYQMLV 137
Query: 402 GMNYLHQNNIIHRDLKAANLLMDENEVSLLLSLCL 436
G+ +LH IIHRDLK +N+++ + +L L
Sbjct: 138 GIKHLHSAGIIHRDLKPSNIVVKSDATLKILDFGL 172
>pdb|3R1N|A Chain A, Mk3 Kinase Bound To Compound 5b
pdb|3SHE|A Chain A, Novel Atp-Competitive Mk2 Inhibitors With Potent
Biochemical And Cell- Based Activity Throughout The
Series
Length = 317
Score = 42.4 bits (98), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 24/76 (31%), Positives = 38/76 (50%), Gaps = 3/76 (3%)
Query: 364 LCIVTEFMSGGSVYDYLHKLKG--VFKLPSLLKVAIDVSKGMNYLHQNNIIHRDLKAANL 421
L I+ E M GG ++ + + +G F ++ D+ + +LH +NI HRD+K NL
Sbjct: 82 LLIIMECMEGGELFSRIQE-RGDQAFTEREAAEIMRDIGTAIQFLHSHNIAHRDVKPENL 140
Query: 422 LMDENEVSLLLSLCLF 437
L E +L L F
Sbjct: 141 LYTSKEKDAVLKLTDF 156
>pdb|2W96|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 42.4 bits (98), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 35/138 (25%), Positives = 67/138 (48%), Gaps = 14/138 (10%)
Query: 298 SKVASGSYGDLY--RGTYCSQDVAIKVLKPERINSDMQKEFAQEVFIMRKVR---HKNVV 352
+++ G+YG +Y R + VA+K ++ + +EV ++R++ H NVV
Sbjct: 10 AEIGVGAYGTVYKARDPHSGHFVALKSVRVPNGEEGLPISTVREVALLRRLEAFEHPNVV 69
Query: 353 QFIGACT-----KPPSLCIVTEFMSGGSVYDYLHKLKGVFKLP--SLLKVAIDVSKGMNY 405
+ + C + + +V E + + YL K LP ++ + +G+++
Sbjct: 70 RLMDVCATSRTDREIKVTLVFEHVDQ-DLRTYLDKAPPP-GLPAETIKDLMRQFLRGLDF 127
Query: 406 LHQNNIIHRDLKAANLLM 423
LH N I+HRDLK N+L+
Sbjct: 128 LHANCIVHRDLKPENILV 145
>pdb|2W9F|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 42.4 bits (98), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 35/138 (25%), Positives = 67/138 (48%), Gaps = 14/138 (10%)
Query: 298 SKVASGSYGDLY--RGTYCSQDVAIKVLKPERINSDMQKEFAQEVFIMRKVR---HKNVV 352
+++ G+YG +Y R + VA+K ++ + +EV ++R++ H NVV
Sbjct: 10 AEIGVGAYGTVYKARDPHSGHFVALKSVRVPNGEEGLPISTVREVALLRRLEAFEHPNVV 69
Query: 353 QFIGACT-----KPPSLCIVTEFMSGGSVYDYLHKLKGVFKLP--SLLKVAIDVSKGMNY 405
+ + C + + +V E + + YL K LP ++ + +G+++
Sbjct: 70 RLMDVCATSRTDREIKVTLVFEHVDQ-DLRTYLDKAPPP-GLPAETIKDLMRQFLRGLDF 127
Query: 406 LHQNNIIHRDLKAANLLM 423
LH N I+HRDLK N+L+
Sbjct: 128 LHANCIVHRDLKPENILV 145
>pdb|3FHR|A Chain A, High Resolution Crystal Structure Of Mitogen-Activated
Protein Kinase-Activated Protein Kinase 3
(Mk3)-Inhibitor Complex
pdb|3FXW|A Chain A, High Resolution Crystal Structure Of Mitogen-Activated
Protein Kinase- Activated Protein Kinase 3INHIBITOR 2
COMPLEX
Length = 336
Score = 42.0 bits (97), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 24/76 (31%), Positives = 38/76 (50%), Gaps = 3/76 (3%)
Query: 364 LCIVTEFMSGGSVYDYLHKLKG--VFKLPSLLKVAIDVSKGMNYLHQNNIIHRDLKAANL 421
L I+ E M GG ++ + + +G F ++ D+ + +LH +NI HRD+K NL
Sbjct: 101 LLIIMECMEGGELFSRIQE-RGDQAFTEREAAEIMRDIGTAIQFLHSHNIAHRDVKPENL 159
Query: 422 LMDENEVSLLLSLCLF 437
L E +L L F
Sbjct: 160 LYTSKEKDAVLKLTDF 175
>pdb|1O9U|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin
Peptide
Length = 350
Score = 42.0 bits (97), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 42/149 (28%), Positives = 75/149 (50%), Gaps = 20/149 (13%)
Query: 300 VASGSYGDLYRGTYC--SQDVAIK-VLKPERINSDMQKEFAQEVFIMRKVRHKNVVQ--- 353
+ +GS+G +Y+ C + VAIK VL+ + + +E+ IMRK+ H N+V+
Sbjct: 28 IGNGSFGVVYQAKLCDSGELVAIKKVLQGKAFKN-------RELQIMRKLDHCNIVRLRY 80
Query: 354 -FIGACTKPPS--LCIVTEFMSGGSVYDYLHKLKGVFKLPSL-LKVAI-DVSKGMNYLHQ 408
F + K L +V +++ H + LP + +K+ + + + + Y+H
Sbjct: 81 FFYSSGEKKDEVYLNLVLDYVPATVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHS 140
Query: 409 NNIIHRDLKAANLLMDENEVSLLLSLCLF 437
I HRD+K NLL+D + + +L LC F
Sbjct: 141 FGICHRDIKPQNLLLDPD--TAVLKLCDF 167
>pdb|1ZXE|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|C Chain C, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|D Chain D, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|E Chain E, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|F Chain F, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
Length = 303
Score = 42.0 bits (97), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 29/140 (20%), Positives = 60/140 (42%), Gaps = 14/140 (10%)
Query: 300 VASGSYGDLYRGTYCSQDVAIKVLKPERINSDMQKEFAQEVFIMRKVRHKNVVQFIGA-- 357
+ G++G + + + D +K R + EV ++ + H+ VV++ A
Sbjct: 14 LGQGAFGQVVKAR-NALDSRYYAIKKIRHTEEKLSTILSEVXLLASLNHQYVVRYYAAWL 72
Query: 358 -----------CTKPPSLCIVTEFMSGGSVYDYLHKLKGVFKLPSLLKVAIDVSKGMNYL 406
K +L I E+ ++YD +H + ++ + + ++Y+
Sbjct: 73 ERRNFVKPXTAVKKKSTLFIQXEYCENRTLYDLIHSENLNQQRDEYWRLFRQILEALSYI 132
Query: 407 HQNNIIHRDLKAANLLMDEN 426
H IIHR+LK N+ +DE+
Sbjct: 133 HSQGIIHRNLKPXNIFIDES 152
>pdb|4FR4|A Chain A, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|B Chain B, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|C Chain C, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|D Chain D, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|E Chain E, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|F Chain F, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
Length = 384
Score = 41.6 bits (96), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 29/142 (20%), Positives = 68/142 (47%), Gaps = 4/142 (2%)
Query: 288 EIDPKHLKFGSKVASGSYGD--LYRGTYCSQDVAIKVLKPER-INSDMQKEFAQEVFIMR 344
+++ H + + GS+G + + + A+K + ++ + + + +E+ IM+
Sbjct: 11 DVNFDHFEILRAIGKGSFGKVCIVQKNDTKKMYAMKYMNKQKCVERNEVRNVFKELQIMQ 70
Query: 345 KVRHKNVVQFIGACTKPPSLCIVTEFMSGGSVYDYLHKLKGVFKLPSLLKVAIDVSKGMN 404
+ H +V + + +V + + GG + +L + FK ++ ++ ++
Sbjct: 71 GLEHPFLVNLWYSFQDEEDMFMVVDLLLGGDLRYHLQQ-NVHFKEETVKLFICELVMALD 129
Query: 405 YLHQNNIIHRDLKAANLLMDEN 426
YL IIHRD+K N+L+DE+
Sbjct: 130 YLQNQRIIHRDMKPDNILLDEH 151
>pdb|3VUL|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M1 In Map
Kinase Jnk1
Length = 370
Score = 41.6 bits (96), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 38/154 (24%), Positives = 63/154 (40%), Gaps = 37/154 (24%)
Query: 306 GDLYRGTYCS-------QDVAIKVLKPERINSDMQKEFAQEVFIMRKVRHKNVVQFIGAC 358
G +G C+ ++VAIK L N K +E+ +M+ V HKN++ +
Sbjct: 33 GSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAKRAYRELVLMKVVNHKNIIGLLNVF 92
Query: 359 TKPPSL------CIVTEFMSGGSVYDYLHKLKGVFKLPSLLKVAIDVSK----------G 402
T SL IV E M L ++++ +D + G
Sbjct: 93 TPQKSLEEFQDVYIVMELMDAN--------------LSQVIQMELDHERMSYLLYQMLVG 138
Query: 403 MNYLHQNNIIHRDLKAANLLMDENEVSLLLSLCL 436
+ +LH IIHRDLK +N+++ + +L L
Sbjct: 139 IKHLHSAGIIHRDLKPSNIVVKSDATLKILDFGL 172
>pdb|4G3G|A Chain A, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) V408l Bound To A 2-(aminothiazolyl)phenol (cmp3)
Length = 350
Score = 41.6 bits (96), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 32/135 (23%), Positives = 60/135 (44%), Gaps = 20/135 (14%)
Query: 299 KVASGSYGDLYR------GTYCS-QDVAIKVLKPERINSDMQKEFAQEVFIMRKVRHKNV 351
++ GS+G+++R G C+ + V ++V + E E+ + +
Sbjct: 79 RLGRGSFGEVHRMKDKQTGFQCAVKKVRLEVFRVE------------ELVACAGLSSPRI 126
Query: 352 VQFIGACTKPPSLCIVTEFMSGGSVYDYLHKLKGVFKLPSLLKVAIDVSKGMNYLHQNNI 411
V GA + P + I E + GGS+ + ++ G L +G+ YLH I
Sbjct: 127 VPLYGAVREGPWVNIFMELLEGGSLGQLIKQM-GCLPEDRALYYLGQALEGLEYLHTRRI 185
Query: 412 IHRDLKAANLLMDEN 426
+H D+KA N+L+ +
Sbjct: 186 LHGDVKADNVLLSSD 200
>pdb|1TKI|A Chain A, Autoinhibited Serine Kinase Domain Of The Giant Muscle
Protein Titin
pdb|1TKI|B Chain B, Autoinhibited Serine Kinase Domain Of The Giant Muscle
Protein Titin
Length = 321
Score = 41.6 bits (96), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 31/153 (20%), Positives = 69/153 (45%), Gaps = 13/153 (8%)
Query: 300 VASGSYGDLYRGTYCSQDVAIK--VLKPERINSDMQKEFAQEVFIMRKVRHKNVVQFIGA 357
+ G +G ++R C + + K + K ++ Q +E+ I+ RH+N++ +
Sbjct: 13 LGRGEFGIVHR---CVETSSKKTYMAKFVKVKGTDQVLVKKEISILNIARHRNILHLHES 69
Query: 358 CTKPPSLCIVTEFMSGGSVYDYLHKLKGVFKLPSLLKVAIDVSKGMNYLHQNNIIHRDLK 417
L ++ EF+SG +++ ++ ++ V + + +LH +NI H D++
Sbjct: 70 FESMEELVMIFEFISGLDIFERINTSAFELNEREIVSYVHQVCEALQFLHSHNIGHFDIR 129
Query: 418 AANLLMDENEVSLLLSLCLFTVSILFCGKGREL 450
N++ S T+ I+ G+ R+L
Sbjct: 130 PENIIYQTRRSS--------TIKIIEFGQARQL 154
>pdb|4E7W|A Chain A, Structure Of Gsk3 From Ustilago Maydis
Length = 394
Score = 41.6 bits (96), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 41/135 (30%), Positives = 65/135 (48%), Gaps = 17/135 (12%)
Query: 300 VASGSYGDLYRGTYCSQD-VAIK-VLKPERINSDMQKEFAQEVFIMRKVRHKNVVQFI-- 355
+ +GS+G +++ D VAIK VL+ +R + +E+ IMR V+H NVV
Sbjct: 48 IGNGSFGVVFQAKLVESDEVAIKKVLQDKRFKN-------RELQIMRIVKHPNVVDLKAF 100
Query: 356 ----GACTKPPSLCIVTEFMSGGSVYDYLHKLKGVFKLPSLL-KVAI-DVSKGMNYLHQN 409
G L +V E++ H K +P LL K+ + + + + Y+H
Sbjct: 101 FYSNGDKKDEVFLNLVLEYVPETVYRASRHYAKLKQTMPMLLIKLYMYQLLRSLAYIHSI 160
Query: 410 NIIHRDLKAANLLMD 424
I HRD+K NLL+D
Sbjct: 161 GICHRDIKPQNLLLD 175
>pdb|3VUK|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M5 In Map
Kinase Jnk1
Length = 370
Score = 41.6 bits (96), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 38/154 (24%), Positives = 63/154 (40%), Gaps = 37/154 (24%)
Query: 306 GDLYRGTYCS-------QDVAIKVLKPERINSDMQKEFAQEVFIMRKVRHKNVVQFIGAC 358
G +G C+ ++VAIK L N K +E+ +M+ V HKN++ +
Sbjct: 33 GSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAKRAYRELVLMKVVNHKNIIGLLNVF 92
Query: 359 TKPPSL------CIVTEFMSGGSVYDYLHKLKGVFKLPSLLKVAIDVSK----------G 402
T SL IV E M L ++++ +D + G
Sbjct: 93 TPQKSLEEFQDVYIVMELMDAN--------------LSQVIQMELDHERMSYLLYQMLVG 138
Query: 403 MNYLHQNNIIHRDLKAANLLMDENEVSLLLSLCL 436
+ +LH IIHRDLK +N+++ + +L L
Sbjct: 139 IKHLHSAGIIHRDLKPSNIVVKSDATLKILDFGL 172
>pdb|3VUI|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M2 In Map
Kinase Jnk1
Length = 370
Score = 41.2 bits (95), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 38/155 (24%), Positives = 64/155 (41%), Gaps = 32/155 (20%)
Query: 300 VASGSYGDLYRG--TYCSQDVAIKVLKPERINSDMQKEFAQEVFIMRKVRHKNVVQFIGA 357
+ SG+ G + ++VAIK L N K +E+ +M+ V HKN++ +
Sbjct: 32 IGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAKRAYRELVLMKVVNHKNIIGLLNV 91
Query: 358 CTKPPSL------CIVTEFMSGGSVYDYLHKLKGVFKLPSLLKVAIDVSK---------- 401
T SL IV E M L ++++ +D +
Sbjct: 92 FTPQKSLEEFQDVYIVMELMDAN--------------LSQVIQMELDHERMSYLLYQMLC 137
Query: 402 GMNYLHQNNIIHRDLKAANLLMDENEVSLLLSLCL 436
G+ +LH IIHRDLK +N+++ + +L L
Sbjct: 138 GIKHLHSAGIIHRDLKPSNIVVKSDATLKILDFGL 172
>pdb|1H8F|A Chain A, Glycogen Synthase Kinase 3 Beta.
pdb|1H8F|B Chain B, Glycogen Synthase Kinase 3 Beta
Length = 352
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 42/149 (28%), Positives = 75/149 (50%), Gaps = 20/149 (13%)
Query: 300 VASGSYGDLYRGTYC--SQDVAIK-VLKPERINSDMQKEFAQEVFIMRKVRHKNVVQ--- 353
+ +GS+G +Y+ C + VAIK VL+ + + +E+ IMRK+ H N+V+
Sbjct: 28 IGNGSFGVVYQAKLCDSGELVAIKKVLQGKAFKN-------RELQIMRKLDHCNIVRLRY 80
Query: 354 -FIGACTKPPS--LCIVTEFMSGGSVYDYLHKLKGVFKLPSL-LKVAI-DVSKGMNYLHQ 408
F + K L +V +++ H + LP + +K+ + + + + Y+H
Sbjct: 81 FFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHS 140
Query: 409 NNIIHRDLKAANLLMDENEVSLLLSLCLF 437
I HRD+K NLL+D + + +L LC F
Sbjct: 141 FGICHRDIKPQNLLLDPD--TAVLKLCDF 167
>pdb|1UV5|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With
6-Bromoindirubin-3'-Oxime
Length = 350
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 42/149 (28%), Positives = 75/149 (50%), Gaps = 20/149 (13%)
Query: 300 VASGSYGDLYRGTYC--SQDVAIK-VLKPERINSDMQKEFAQEVFIMRKVRHKNVVQ--- 353
+ +GS+G +Y+ C + VAIK VL+ + + +E+ IMRK+ H N+V+
Sbjct: 28 IGNGSFGVVYQAKLCDSGELVAIKKVLQGKAFKN-------RELQIMRKLDHCNIVRLRY 80
Query: 354 -FIGACTKPPS--LCIVTEFMSGGSVYDYLHKLKGVFKLPSL-LKVAI-DVSKGMNYLHQ 408
F + K L +V +++ H + LP + +K+ + + + + Y+H
Sbjct: 81 FFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHS 140
Query: 409 NNIIHRDLKAANLLMDENEVSLLLSLCLF 437
I HRD+K NLL+D + + +L LC F
Sbjct: 141 FGICHRDIKPQNLLLDPD--TAVLKLCDF 167
>pdb|3VUH|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M3 In Map
Kinase Jnk1
Length = 370
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 38/155 (24%), Positives = 64/155 (41%), Gaps = 32/155 (20%)
Query: 300 VASGSYGDLYRG--TYCSQDVAIKVLKPERINSDMQKEFAQEVFIMRKVRHKNVVQFIGA 357
+ SG+ G + ++VAIK L N K +E+ +M+ V HKN++ +
Sbjct: 32 IGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIIGLLNV 91
Query: 358 CTKPPSL------CIVTEFMSGGSVYDYLHKLKGVFKLPSLLKVAIDVSK---------- 401
T SL IV E M L ++++ +D +
Sbjct: 92 FTPQKSLEEFQDVYIVMELMDAN--------------LSQVIQMELDHERMSYLLYQMLC 137
Query: 402 GMNYLHQNNIIHRDLKAANLLMDENEVSLLLSLCL 436
G+ +LH IIHRDLK +N+++ + +L L
Sbjct: 138 GIKHLHSAGIIHRDLKPSNIVVKSDATLKILDFGL 172
>pdb|2F2U|A Chain A, Crystal Structure Of The Rho-Kinase Kinase Domain
pdb|2F2U|B Chain B, Crystal Structure Of The Rho-Kinase Kinase Domain
pdb|2H9V|A Chain A, Structural Basis For Induced-Fit Binding Of Rho-Kinase To
The Inhibitor Y27632
Length = 402
Score = 40.4 bits (93), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 35/130 (26%), Positives = 58/130 (44%), Gaps = 5/130 (3%)
Query: 300 VASGSYGD--LYRGTYCSQDVAIKVL-KPERINSDMQKEFAQEVFIMRKVRHKNVVQFIG 356
+ G++G+ L R + A+K+L K E I F +E IM VVQ
Sbjct: 83 IGRGAFGEVQLVRHKASQKVYAMKLLSKFEMIKRSDSAFFWEERDIMAFANSPWVVQLFC 142
Query: 357 ACTKPPSLCIVTEFMSGGSVYDYLHKLKGVFKLPSLLKVAIDVSKGMNYLHQNNIIHRDL 416
A L +V E+M GG + + + K +V ++ +H +IHRD+
Sbjct: 143 AFQDDKYLYMVMEYMPGGDLVNLMSNYDVPEKWAKFYTA--EVVLALDAIHSMGLIHRDV 200
Query: 417 KAANLLMDEN 426
K N+L+D++
Sbjct: 201 KPDNMLLDKH 210
>pdb|3RGF|A Chain A, Crystal Structure Of Human Cdk8CYCC
Length = 405
Score = 40.4 bits (93), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 35/141 (24%), Positives = 63/141 (44%), Gaps = 19/141 (13%)
Query: 297 GSKVASGSYGDLYRGTYCSQDVAIKVLKPERINSDMQKEFAQEVFIMRKVRHKNVVQ--- 353
G KV G+YG +Y+ + + + +E+ ++R+++H NV+
Sbjct: 26 GCKVGRGTYGHVYKAKRKDGKDDKDYALKQIEGTGISMSACREIALLRELKHPNVISLQK 85
Query: 354 -FIGACTKPPSLCI---------VTEFMSGGSVYDYLHKL-KGVFKLPSLLKVAIDVSKG 402
F+ + L + +F +L +G+ K SLL +D G
Sbjct: 86 VFLSHADRKVWLLFDYAEHDLWHIIKFHRASKANKKPVQLPRGMVK--SLLYQILD---G 140
Query: 403 MNYLHQNNIIHRDLKAANLLM 423
++YLH N ++HRDLK AN+L+
Sbjct: 141 IHYLHANWVLHRDLKPANILV 161
>pdb|3BHH|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|C Chain C, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|D Chain D, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
Length = 295
Score = 40.4 bits (93), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 26/133 (19%), Positives = 63/133 (47%), Gaps = 13/133 (9%)
Query: 315 SQDVAIKVLKPERINSDMQKEFAQEVFIMRKVRHKNVVQFIGACTKPPSLCIVTEFMSGG 374
+ A K++ +++++ ++ +E I R ++H N+V+ + ++ +V + ++GG
Sbjct: 29 GHEYAAKIINTKKLSARDHQKLEREARICRLLKHSNIVRLHDSISEEGFHYLVFDLVTGG 88
Query: 375 SVY------DYLHKLKGVFKLPSLLKVAIDVSKGMNYLHQNNIIHRDLKAANLLMDENEV 428
++ +Y + + +L+ + + HQ ++HRDLK NLL+
Sbjct: 89 ELFEDIVAREYYSEADASHCIQQILEAVL-------HCHQMGVVHRDLKPENLLLASKCK 141
Query: 429 SLLLSLCLFTVSI 441
+ L F ++I
Sbjct: 142 GAAVKLADFGLAI 154
>pdb|3FI3|A Chain A, Crystal Structure Of Jnk3 With Indazole Inhibitor, Sr-3737
Length = 364
Score = 40.4 bits (93), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 37/149 (24%), Positives = 66/149 (44%), Gaps = 20/149 (13%)
Query: 300 VASGSYGDLYRG--TYCSQDVAIKVLKPERINSDMQKEFAQEVFIMRKVRHKNVVQFIGA 357
+ SG+ G + ++VAIK L N K +E+ +M+ V HKN++ +
Sbjct: 32 IGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKXVNHKNIISLLNV 91
Query: 358 CTKPPSLCIVTEFMSGGSVYDYLHKLKGVFKLPSLLKVAIDVSK----------GMNYLH 407
T +L EF VY + + L ++++ +D + G+ +LH
Sbjct: 92 FTPQKTL---EEFQD---VYLVMELMDA--NLXQVIQMELDHERMSYLLYQMLXGIKHLH 143
Query: 408 QNNIIHRDLKAANLLMDENEVSLLLSLCL 436
IIHRDLK +N+++ + +L L
Sbjct: 144 SAGIIHRDLKPSNIVVKSDXTLKILDFGL 172
>pdb|3FV8|A Chain A, Jnk3 Bound To Piperazine Amide Inhibitor, Sr2774
Length = 355
Score = 40.0 bits (92), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 34/131 (25%), Positives = 60/131 (45%), Gaps = 18/131 (13%)
Query: 316 QDVAIKVLKPERINSDMQKEFAQEVFIMRKVRHKNVVQFIGACTKPPSLCIVTEFMSGGS 375
++VAIK L N K +E+ +M+ V HKN++ + T +L EF
Sbjct: 50 RNVAIKKLSRPFQNQTHAKRAYRELVLMKXVNHKNIISLLNVFTPQKTL---EEFQD--- 103
Query: 376 VYDYLHKLKGVFKLPSLLKVAIDVSK----------GMNYLHQNNIIHRDLKAANLLMDE 425
VY + + L ++++ +D + G+ +LH IIHRDLK +N+++
Sbjct: 104 VYLVMELMDA--NLXQVIQMELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKS 161
Query: 426 NEVSLLLSLCL 436
+ +L L
Sbjct: 162 DXTLKILDFGL 172
>pdb|3VUG|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M2 In Map
Kinase Jnk1
Length = 370
Score = 39.7 bits (91), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 36/142 (25%), Positives = 60/142 (42%), Gaps = 32/142 (22%)
Query: 300 VASGSYGDLYRG--TYCSQDVAIKVLKPERINSDMQKEFAQEVFIMRKVRHKNVVQFIGA 357
+ SG+ G + ++VAIK L N K +E+ +M+ V HKN++ +
Sbjct: 32 IGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIIGLLNV 91
Query: 358 CTKPPSL------CIVTEFMSGGSVYDYLHKLKGVFKLPSLLKVAIDVSK---------- 401
T SL IV E M L ++++ +D +
Sbjct: 92 FTPQKSLEEFQDVYIVMELMDAN--------------LSQVIQMELDHERMSYLLYQMLC 137
Query: 402 GMNYLHQNNIIHRDLKAANLLM 423
G+ +LH IIHRDLK +N+++
Sbjct: 138 GIKHLHSAGIIHRDLKPSNIVV 159
>pdb|3NR9|A Chain A, Structure Of Human Cdc2-Like Kinase 2 (Clk2)
pdb|3NR9|B Chain B, Structure Of Human Cdc2-Like Kinase 2 (Clk2)
pdb|3NR9|C Chain C, Structure Of Human Cdc2-Like Kinase 2 (Clk2)
Length = 368
Score = 39.7 bits (91), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 38/151 (25%), Positives = 69/151 (45%), Gaps = 22/151 (14%)
Query: 298 SKVASGSYG------DLYRGTYCSQDVAIKVLKPERINSDMQKEFAQ-EVFIMRKVRHKN 350
S + G++G D RG VA+K++K N + KE A+ E+ ++ K+ K+
Sbjct: 39 STLGEGTFGRVVQCVDHRRG---GARVALKIIK----NVEKYKEAARLEINVLEKINEKD 91
Query: 351 ------VVQFIGACTKPPSLCIVTEFMSGGSVYDYLHKLKGV-FKLPSLLKVAIDVSKGM 403
VQ +CI E + G S +D+L + + + + +A + + +
Sbjct: 92 PDNKNLCVQMFDWFDYHGHMCISFELL-GLSTFDFLKDNNYLPYPIHQVRHMAFQLCQAV 150
Query: 404 NYLHQNNIIHRDLKAANLLMDENEVSLLLSL 434
+LH N + H DLK N+L ++ L +L
Sbjct: 151 KFLHDNKLTHTDLKPENILFVNSDYELTYNL 181
>pdb|3FI2|A Chain A, Crystal Structure Of Jnk3 With Amino-Pyrazole Inhibitor,
Sr- 3451
Length = 353
Score = 39.7 bits (91), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 34/131 (25%), Positives = 60/131 (45%), Gaps = 18/131 (13%)
Query: 316 QDVAIKVLKPERINSDMQKEFAQEVFIMRKVRHKNVVQFIGACTKPPSLCIVTEFMSGGS 375
++VAIK L N K +E+ +M+ V HKN++ + T +L EF
Sbjct: 50 RNVAIKKLSRPFQNQTHAKRAYRELVLMKXVNHKNIISLLNVFTPQKTL---EEFQD--- 103
Query: 376 VYDYLHKLKGVFKLPSLLKVAIDVSK----------GMNYLHQNNIIHRDLKAANLLMDE 425
VY + + L ++++ +D + G+ +LH IIHRDLK +N+++
Sbjct: 104 VYLVMELMDA--NLCQVIQMELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKS 161
Query: 426 NEVSLLLSLCL 436
+ +L L
Sbjct: 162 DXTLKILDFGL 172
>pdb|2PML|X Chain X, Crystal Structure Of Pfpk7 In Complex With An Atp Analogue
pdb|2PMN|X Chain X, Crystal Structure Of Pfpk7 In Complex With An Atp-Site
Inhibitor
pdb|2PMO|X Chain X, Crystal Structure Of Pfpk7 In Complex With Hymenialdisine
Length = 348
Score = 39.7 bits (91), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 28/100 (28%), Positives = 50/100 (50%), Gaps = 8/100 (8%)
Query: 335 EFAQEVFIMRKVRHKNVVQFIGACTKPPSLCIVTEFMSGGSVYDY------LHKLKGVFK 388
+F E+ I+ ++++ + G T + I+ E+M S+ + L K F
Sbjct: 89 DFKNELQIITDIKNEYCLTCEGIITNYDEVYIIYEYMENDSILKFDEYFFVLDKNYTCFI 148
Query: 389 LPSLLKVAI-DVSKGMNYLH-QNNIIHRDLKAANLLMDEN 426
++K I V +Y+H + NI HRD+K +N+LMD+N
Sbjct: 149 PIQVIKCIIKSVLNSFSYIHNEKNICHRDVKPSNILMDKN 188
>pdb|2G01|A Chain A, Pyrazoloquinolones As Novel, Selective Jnk1 Inhibitors
pdb|2G01|B Chain B, Pyrazoloquinolones As Novel, Selective Jnk1 Inhibitors
pdb|2GMX|A Chain A, Selective Aminopyridine-Based C-Jun N-Terminal Kinase
Inhibitors With Cellular Activity
pdb|2GMX|B Chain B, Selective Aminopyridine-Based C-Jun N-Terminal Kinase
Inhibitors With Cellular Activity
pdb|2H96|A Chain A, Discovery Of Potent, Highly Selective, And Orally
Bioavailable Pyridine Carboxamide C-Jun Nh2-Terminal
Kinase Inhibitors
pdb|2H96|B Chain B, Discovery Of Potent, Highly Selective, And Orally
Bioavailable Pyridine Carboxamide C-Jun Nh2-Terminal
Kinase Inhibitors
pdb|2NO3|A Chain A, Novel 4-Anilinopyrimidines As Potent Jnk1 Inhibitors
pdb|2NO3|B Chain B, Novel 4-Anilinopyrimidines As Potent Jnk1 Inhibitors
Length = 370
Score = 39.7 bits (91), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 43/178 (24%), Positives = 76/178 (42%), Gaps = 21/178 (11%)
Query: 300 VASGSYGDLYRG--TYCSQDVAIKVLKPERINSDMQKEFAQEVFIMRKVRHKNVVQFIGA 357
+ SG+ G + ++VAIK L N K +E+ +M+ V HKN++ +
Sbjct: 32 IGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIIGLLNV 91
Query: 358 CTKPPSLCIVTEFMSGGSVYDYLHKLKGVFKLPSLLKVAIDVSK----------GMNYLH 407
T SL EF VY + + L ++++ +D + G+ +LH
Sbjct: 92 FTPQKSL---EEFQD---VYIVMELMDA--NLCQVIQMELDHERMSYLLYQMLCGIKHLH 143
Query: 408 QNNIIHRDLKAANLLMDENEVSLLLSLCLF-TVSILFCGKGRELISLFLGNDVLLQFG 464
IIHRDLK +N+++ + +L L T F + + + +V+L G
Sbjct: 144 SAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMMEPEVVTRYYRAPEVILGMG 201
>pdb|3O17|A Chain A, Crystal Structure Of Jnk1-Alpha1 Isoform
pdb|3O17|B Chain B, Crystal Structure Of Jnk1-Alpha1 Isoform
pdb|3O2M|A Chain A, Crystal Structure Of Jnk1-Alpha1 Isoform Complex With A
Biaryl Tetrazol (A-82118)
pdb|3O2M|B Chain B, Crystal Structure Of Jnk1-Alpha1 Isoform Complex With A
Biaryl Tetrazol (A-82118)
Length = 370
Score = 39.3 bits (90), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 41/174 (23%), Positives = 72/174 (41%), Gaps = 13/174 (7%)
Query: 300 VASGSYGDLYRG--TYCSQDVAIKVLKPERINSDMQKEFAQEVFIMRKVRHKNVVQFIGA 357
+ SG+ G + ++VAIK L N K +E+ +M+ V HKN++ +
Sbjct: 32 IGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIIGLLNV 91
Query: 358 CTKPPSL------CIVTEFMSGGSVYDYLHKLKGVFKLPSLLKVAIDVSKGMNYLHQNNI 411
T SL IV E M + ++ + + + G+ +LH I
Sbjct: 92 FTPQKSLEEFQDVYIVMELMDA----NLCQVIQMELDHERMSYLLYQMLCGIKHLHSAGI 147
Query: 412 IHRDLKAANLLMDENEVSLLLSLCLF-TVSILFCGKGRELISLFLGNDVLLQFG 464
IHRDLK +N+++ + +L L T F + + + +V+L G
Sbjct: 148 IHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMMEPEVVTRYYRAPEVILGMG 201
>pdb|3KVX|A Chain A, Jnk3 Bound To Aminopyrimidine Inhibitor, Sr-3562
Length = 364
Score = 39.3 bits (90), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 37/149 (24%), Positives = 66/149 (44%), Gaps = 20/149 (13%)
Query: 300 VASGSYGDLYRG--TYCSQDVAIKVLKPERINSDMQKEFAQEVFIMRKVRHKNVVQFIGA 357
+ SG+ G + ++VAIK L N K +E+ +M+ V HKN++ +
Sbjct: 32 IGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLLNV 91
Query: 358 CTKPPSLCIVTEFMSGGSVYDYLHKLKGVFKLPSLLKVAIDVSK----------GMNYLH 407
T +L EF VY + + L ++++ +D + G+ +LH
Sbjct: 92 FTPQKTL---EEFQD---VYLVMELMDA--NLXQVIQMELDHERMSYLLYQMLXGIKHLH 143
Query: 408 QNNIIHRDLKAANLLMDENEVSLLLSLCL 436
IIHRDLK +N+++ + +L L
Sbjct: 144 SAGIIHRDLKPSNIVVKSDXTLKILDFGL 172
>pdb|2R9S|A Chain A, C-Jun N-Terminal Kinase 3 With 3,5-Disubstituted Quinoline
Inhibitor
pdb|2R9S|B Chain B, C-Jun N-Terminal Kinase 3 With 3,5-Disubstituted Quinoline
Inhibitor
Length = 356
Score = 39.3 bits (90), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 37/149 (24%), Positives = 66/149 (44%), Gaps = 20/149 (13%)
Query: 300 VASGSYGDLYRG--TYCSQDVAIKVLKPERINSDMQKEFAQEVFIMRKVRHKNVVQFIGA 357
+ SG+ G + ++VAIK L N K +E+ +M+ V HKN++ +
Sbjct: 25 IGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLLNV 84
Query: 358 CTKPPSLCIVTEFMSGGSVYDYLHKLKGVFKLPSLLKVAIDVSK----------GMNYLH 407
T +L EF VY + + L ++++ +D + G+ +LH
Sbjct: 85 FTPQKTL---EEFQD---VYLVMELMDA--NLXQVIQMELDHERMSYLLYQMLXGIKHLH 136
Query: 408 QNNIIHRDLKAANLLMDENEVSLLLSLCL 436
IIHRDLK +N+++ + +L L
Sbjct: 137 SAGIIHRDLKPSNIVVKSDXTLKILDFGL 165
>pdb|3V3V|A Chain A, Structural And Functional Analysis Of Quercetagetin, A
Natural Jnk1 Inhibitor
Length = 379
Score = 39.3 bits (90), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 36/136 (26%), Positives = 62/136 (45%), Gaps = 20/136 (14%)
Query: 300 VASGSYGDLYRG--TYCSQDVAIKVLKPERINSDMQKEFAQEVFIMRKVRHKNVVQFIGA 357
+ SG+ G + ++VAIK L N K +E+ +M+ V HKN++ +
Sbjct: 32 IGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIIGLLNV 91
Query: 358 CTKPPSLCIVTEFMSGGSVYDYLHKLKGVFKLPSLLKVAIDVSK----------GMNYLH 407
T SL EF VY + + L ++++ +D + G+ +LH
Sbjct: 92 FTPQKSL---EEFQD---VYIVMELMDA--NLCQVIQMELDHERMSYLLYQMLCGIKHLH 143
Query: 408 QNNIIHRDLKAANLLM 423
IIHRDLK +N+++
Sbjct: 144 SAGIIHRDLKPSNIVV 159
>pdb|3V8S|A Chain A, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3V8S|B Chain B, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3V8S|C Chain C, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3V8S|D Chain D, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3TV7|A Chain A, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TV7|B Chain B, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TV7|C Chain C, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TV7|D Chain D, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TWJ|A Chain A, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
pdb|3TWJ|B Chain B, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
pdb|3TWJ|C Chain C, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
pdb|3TWJ|D Chain D, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
Length = 410
Score = 39.3 bits (90), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 37/132 (28%), Positives = 58/132 (43%), Gaps = 9/132 (6%)
Query: 300 VASGSYGD--LYRGTYCSQDVAIKVL-KPERINSDMQKEFAQEVFIMRKVRHKNVVQFIG 356
+ G++G+ L R + A+K+L K E I F +E IM VVQ
Sbjct: 77 IGRGAFGEVQLVRHKSTRKVYAMKLLSKFEMIKRSDSAFFWEERDIMAFANSPWVVQLFY 136
Query: 357 ACTKPPSLCIVTEFMSGGSVYDYLHKLKGVFKLPSLLK--VAIDVSKGMNYLHQNNIIHR 414
A L +V E+M GG L L + +P +V ++ +H IHR
Sbjct: 137 AFQDDRYLYMVMEYMPGGD----LVNLMSNYDVPEKWARFYTAEVVLALDAIHSMGFIHR 192
Query: 415 DLKAANLLMDEN 426
D+K N+L+D++
Sbjct: 193 DVKPDNMLLDKS 204
>pdb|2XS0|A Chain A, Linear Binding Motifs For Jnk And For Calcineurin
Antagonistically Control The Nuclear Shuttling Of Nfat4
Length = 386
Score = 39.3 bits (90), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 36/136 (26%), Positives = 62/136 (45%), Gaps = 20/136 (14%)
Query: 300 VASGSYGDLYRG--TYCSQDVAIKVLKPERINSDMQKEFAQEVFIMRKVRHKNVVQFIGA 357
+ SG+ G + ++VAIK L N K +E+ +M+ V HKN++ +
Sbjct: 34 IGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIIGLLNV 93
Query: 358 CTKPPSLCIVTEFMSGGSVYDYLHKLKGVFKLPSLLKVAIDVSK----------GMNYLH 407
T SL EF VY + + L ++++ +D + G+ +LH
Sbjct: 94 FTPQKSL---EEFQD---VYIVMELMDA--NLCQVIQMELDHERMSYLLYQMLCGIKHLH 145
Query: 408 QNNIIHRDLKAANLLM 423
IIHRDLK +N+++
Sbjct: 146 SAGIIHRDLKPSNIVV 161
>pdb|2ESM|A Chain A, Crystal Structure Of Rock 1 Bound To Fasudil
pdb|2ESM|B Chain B, Crystal Structure Of Rock 1 Bound To Fasudil
pdb|2ETK|A Chain A, Crystal Structure Of Rock 1 Bound To Hydroxyfasudil
pdb|2ETK|B Chain B, Crystal Structure Of Rock 1 Bound To Hydroxyfasudil
pdb|2ETR|A Chain A, Crystal Structure Of Rock I Bound To Y-27632
pdb|2ETR|B Chain B, Crystal Structure Of Rock I Bound To Y-27632
pdb|3D9V|A Chain A, Crystal Structure Of Rock I Bound To H-1152p A Di-
Methylated Variant Of Fasudil
pdb|3D9V|B Chain B, Crystal Structure Of Rock I Bound To H-1152p A Di-
Methylated Variant Of Fasudil
pdb|3NCZ|A Chain A, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NCZ|B Chain B, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NCZ|C Chain C, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NCZ|D Chain D, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NDM|A Chain A, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
pdb|3NDM|B Chain B, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
pdb|3NDM|C Chain C, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
pdb|3NDM|D Chain D, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
Length = 415
Score = 39.3 bits (90), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 37/132 (28%), Positives = 58/132 (43%), Gaps = 9/132 (6%)
Query: 300 VASGSYGD--LYRGTYCSQDVAIKVL-KPERINSDMQKEFAQEVFIMRKVRHKNVVQFIG 356
+ G++G+ L R + A+K+L K E I F +E IM VVQ
Sbjct: 82 IGRGAFGEVQLVRHKSTRKVYAMKLLSKFEMIKRSDSAFFWEERDIMAFANSPWVVQLFY 141
Query: 357 ACTKPPSLCIVTEFMSGGSVYDYLHKLKGVFKLPSLLK--VAIDVSKGMNYLHQNNIIHR 414
A L +V E+M GG L L + +P +V ++ +H IHR
Sbjct: 142 AFQDDRYLYMVMEYMPGGD----LVNLMSNYDVPEKWARFYTAEVVLALDAIHSMGFIHR 197
Query: 415 DLKAANLLMDEN 426
D+K N+L+D++
Sbjct: 198 DVKPDNMLLDKS 209
>pdb|2V55|A Chain A, Mechanism Of Multi-site Phosphorylation From A Rock-i:rhoe
Complex Structure
pdb|2V55|C Chain C, Mechanism Of Multi-site Phosphorylation From A Rock-i:rhoe
Complex Structure
Length = 406
Score = 39.3 bits (90), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 37/132 (28%), Positives = 58/132 (43%), Gaps = 9/132 (6%)
Query: 300 VASGSYGD--LYRGTYCSQDVAIKVL-KPERINSDMQKEFAQEVFIMRKVRHKNVVQFIG 356
+ G++G+ L R + A+K+L K E I F +E IM VVQ
Sbjct: 82 IGRGAFGEVQLVRHKSTRKVYAMKLLSKFEMIKRSDSAFFWEERDIMAFANSPWVVQLFY 141
Query: 357 ACTKPPSLCIVTEFMSGGSVYDYLHKLKGVFKLPSLLK--VAIDVSKGMNYLHQNNIIHR 414
A L +V E+M GG L L + +P +V ++ +H IHR
Sbjct: 142 AFQDDRYLYMVMEYMPGGD----LVNLMSNYDVPEKWARFYTAEVVLALDAIHSMGFIHR 197
Query: 415 DLKAANLLMDEN 426
D+K N+L+D++
Sbjct: 198 DVKPDNMLLDKS 209
>pdb|3PZE|A Chain A, Jnk1 In Complex With Inhibitor
Length = 358
Score = 39.3 bits (90), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 31/114 (27%), Positives = 52/114 (45%), Gaps = 10/114 (8%)
Query: 316 QDVAIKVLKPERINSDMQKEFAQEVFIMRKVRHKNVVQFIGACTKPPSL------CIVTE 369
++VAIK L N K +E+ +M+ V HKN++ + T SL IV E
Sbjct: 44 RNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIIGLLNVFTPQKSLEEFQDVYIVME 103
Query: 370 FMSGGSVYDYLHKLKGVFKLPSLLKVAIDVSKGMNYLHQNNIIHRDLKAANLLM 423
M + ++ + + + G+ +LH IIHRDLK +N+++
Sbjct: 104 LMDA----NLCQVIQMELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVV 153
>pdb|3SV0|A Chain A, Crystal Structure Of Casein Kinase-1 Like Protein In Plant
Length = 483
Score = 39.3 bits (90), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 31/132 (23%), Positives = 62/132 (46%), Gaps = 6/132 (4%)
Query: 294 LKFGSKVASGSYGDLYRGT--YCSQDVAIKVLKPERINSDMQKEFAQEVFIMRKVRHKNV 351
+ G K+ SGS+G++Y GT +++VAIK+ E + + + E I R ++
Sbjct: 9 FRLGRKIGSGSFGEIYLGTNIQTNEEVAIKL---ENVKTK-HPQLLYESKIYRILQGGTG 64
Query: 352 VQFIGACTKPPSLCIVTEFMSGGSVYDYLHKLKGVFKLPSLLKVAIDVSKGMNYLHQNNI 411
+ + ++ + G S+ D + L ++L +A + + ++H +
Sbjct: 65 IPNVRWFGVEGDYNVLVMDLLGPSLEDLFNFCSRKLSLKTVLMLADQMINRVEFVHSKSF 124
Query: 412 IHRDLKAANLLM 423
+HRD+K N LM
Sbjct: 125 LHRDIKPDNFLM 136
>pdb|3ELJ|A Chain A, Jnk1 Complexed With A Bis-Anilino-Pyrrolopyrimidine
Inhibitor
Length = 369
Score = 39.3 bits (90), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 31/114 (27%), Positives = 52/114 (45%), Gaps = 10/114 (8%)
Query: 316 QDVAIKVLKPERINSDMQKEFAQEVFIMRKVRHKNVVQFIGACTKPPSL------CIVTE 369
++VAIK L N K +E+ +M+ V HKN++ + T SL IV E
Sbjct: 55 RNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIIGLLNVFTPQKSLEEFQDVYIVME 114
Query: 370 FMSGGSVYDYLHKLKGVFKLPSLLKVAIDVSKGMNYLHQNNIIHRDLKAANLLM 423
M + ++ + + + G+ +LH IIHRDLK +N+++
Sbjct: 115 LMDA----NLCQVIQMELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVV 164
>pdb|2XRW|A Chain A, Linear Binding Motifs For Jnk And For Calcineurin
Antagonistically Control The Nuclear Shuttling Of Nfat4
Length = 371
Score = 39.3 bits (90), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 31/114 (27%), Positives = 52/114 (45%), Gaps = 10/114 (8%)
Query: 316 QDVAIKVLKPERINSDMQKEFAQEVFIMRKVRHKNVVQFIGACTKPPSL------CIVTE 369
++VAIK L N K +E+ +M+ V HKN++ + T SL IV E
Sbjct: 51 RNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIIGLLNVFTPQKSLEEFQDVYIVME 110
Query: 370 FMSGGSVYDYLHKLKGVFKLPSLLKVAIDVSKGMNYLHQNNIIHRDLKAANLLM 423
M + ++ + + + G+ +LH IIHRDLK +N+++
Sbjct: 111 LMDA----NLCQVIQMELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVV 160
>pdb|1UKH|A Chain A, Structural Basis For The Selective Inhibition Of Jnk1 By
The Scaffolding Protein Jip1 And Sp600125
pdb|1UKI|A Chain A, Structural Basis For The Selective Inhibition Of Jnk1 By
The Scaffolding Protein Jip1 And Sp600125
Length = 369
Score = 39.3 bits (90), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 31/114 (27%), Positives = 52/114 (45%), Gaps = 10/114 (8%)
Query: 316 QDVAIKVLKPERINSDMQKEFAQEVFIMRKVRHKNVVQFIGACTKPPSL------CIVTE 369
++VAIK L N K +E+ +M+ V HKN++ + T SL IV E
Sbjct: 50 RNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIIGLLNVFTPQKSLEEFQDVYIVME 109
Query: 370 FMSGGSVYDYLHKLKGVFKLPSLLKVAIDVSKGMNYLHQNNIIHRDLKAANLLM 423
M + ++ + + + G+ +LH IIHRDLK +N+++
Sbjct: 110 LMDA----NLCQVIQMELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVV 159
>pdb|3VUD|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M1 In Map
Kinase Jnk1
Length = 370
Score = 39.3 bits (90), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 33/118 (27%), Positives = 56/118 (47%), Gaps = 18/118 (15%)
Query: 316 QDVAIKVLKPERINSDMQKEFAQEVFIMRKVRHKNVVQFIGACTKPPSLCIVTEFMSGGS 375
++VAIK L N K +E+ +M+ V HKN++ + T SL EF
Sbjct: 50 RNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIIGLLNVFTPQKSL---EEFQD--- 103
Query: 376 VYDYLHKLKGVFKLPSLLKVAIDVSK----------GMNYLHQNNIIHRDLKAANLLM 423
VY + + L ++++ +D + G+ +LH IIHRDLK +N+++
Sbjct: 104 VYIVMELMDA--NLCQVIQMELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVV 159
>pdb|2V62|A Chain A, Structure Of Vaccinia-Related Kinase 2
pdb|2V62|B Chain B, Structure Of Vaccinia-Related Kinase 2
Length = 345
Score = 38.9 bits (89), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 16/39 (41%), Positives = 27/39 (69%)
Query: 385 GVFKLPSLLKVAIDVSKGMNYLHQNNIIHRDLKAANLLM 423
G FK ++L++ I + + Y+H+N +H D+KAANLL+
Sbjct: 146 GTFKKSTVLQLGIRMLDVLEYIHENEYVHGDIKAANLLL 184
>pdb|2DYL|A Chain A, Crystal Structure Of Human Mitogen-Activated Protein
Kinase Kinase 7 Activated Mutant (S287d, T291d)
Length = 318
Score = 38.9 bits (89), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 28/92 (30%), Positives = 47/92 (51%), Gaps = 7/92 (7%)
Query: 351 VVQFIGACTKPPSLCIVTEFMSGGSVYDYLHK-LKGVFKLPSLLKVAIDVSKGMNYL-HQ 408
+VQ G + I E M G+ + L K ++G L K+ + + K + YL +
Sbjct: 86 IVQCFGTFITNTDVFIAMELM--GTCAEKLKKRMQGPIPERILGKMTVAIVKALYYLKEK 143
Query: 409 NNIIHRDLKAANLLMDENEVSLLLSLCLFTVS 440
+ +IHRD+K +N+L+DE + LC F +S
Sbjct: 144 HGVIHRDVKPSNILLDERG---QIKLCDFGIS 172
>pdb|3TTJ|A Chain A, Crystal Structure Of Jnk3 Complexed With Cc-359, A Jnk
Inhibitor For The Prevention Of Ischemia-Reperfusion
Injury
pdb|3TTI|A Chain A, Crystal Structure Of Jnk3 Complexed With Cc-930, An Orally
Active Anti-Fibrotic Jnk Inhibitor
Length = 464
Score = 38.5 bits (88), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 32/118 (27%), Positives = 56/118 (47%), Gaps = 18/118 (15%)
Query: 316 QDVAIKVLKPERINSDMQKEFAQEVFIMRKVRHKNVVQFIGACTKPPSLCIVTEFMSGGS 375
++VAIK L N K +E+ +M+ V HKN++ + T +L EF
Sbjct: 88 RNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLLNVFTPQKTL---EEFQD--- 141
Query: 376 VYDYLHKLKGVFKLPSLLKVAIDVSK----------GMNYLHQNNIIHRDLKAANLLM 423
VY + + L ++++ +D + G+ +LH IIHRDLK +N+++
Sbjct: 142 VYLVMELMDA--NLCQVIQMELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVV 197
>pdb|3OZ6|A Chain A, Crystal Structure Of Mapk From Cryptosporidium Parvum,
Cgd2_1960
pdb|3OZ6|B Chain B, Crystal Structure Of Mapk From Cryptosporidium Parvum,
Cgd2_1960
Length = 388
Score = 38.5 bits (88), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 29/138 (21%), Positives = 66/138 (47%), Gaps = 22/138 (15%)
Query: 299 KVASGSYGDLYRGT--YCSQDVAIK-VLKPERINSDMQKEFAQEVFIMRKVRHKNVVQFI 355
K+ G+YG +++ + VA+K + + ++D Q+ F + + + H+N+V +
Sbjct: 16 KLGKGAYGIVWKSIDRRTGEVVAVKKIFDAFQNSTDAQRTFREIMILTELSGHENIVNLL 75
Query: 356 GA--CTKPPSLCIVTEFMSG-------GSVYDYLHKLKGVFKLPSLLKVAIDVSKGMNYL 406
+ +V ++M ++ + +HK V++L ++K YL
Sbjct: 76 NVLRADNDRDVYLVFDYMETDLHAVIRANILEPVHKQYVVYQLIKVIK----------YL 125
Query: 407 HQNNIIHRDLKAANLLMD 424
H ++HRD+K +N+L++
Sbjct: 126 HSGGLLHRDMKPSNILLN 143
>pdb|4A4X|A Chain A, Nek2-Ede Bound To Cct248662
Length = 279
Score = 38.5 bits (88), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 37/138 (26%), Positives = 63/138 (45%), Gaps = 14/138 (10%)
Query: 300 VASGSYGDLYRGTYCSQDVAIKVLKPERINSDMQKE---FAQEVFIMRKVRHKNVVQFIG 356
+ +GSYG + S D I V K S + E EV ++R+++H N+V++
Sbjct: 14 IGTGSYGRCQKIRRKS-DGKILVWKELDYGSMTEAEKQMLVSEVNLLRELKHPNIVRYYD 72
Query: 357 ACT--KPPSLCIVTEFMSGG---SVYDYLHKLKGVFKLPSLLKVAIDVSKGMNYLHQ--- 408
+L IV E+ GG SV K + +L+V ++ + H+
Sbjct: 73 RIIDRTNTTLYIVMEYCEGGDLASVITKGTKERQYLDEEFVLRVMTQLTLALKECHRRSD 132
Query: 409 --NNIIHRDLKAANLLMD 424
+ ++HRDLK AN+ +D
Sbjct: 133 GGHTVLHRDLKPANVFLD 150
>pdb|3E7O|A Chain A, Crystal Structure Of Jnk2
pdb|3E7O|B Chain B, Crystal Structure Of Jnk2
Length = 360
Score = 38.5 bits (88), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 42/174 (24%), Positives = 75/174 (43%), Gaps = 13/174 (7%)
Query: 300 VASGSYGDLYRG--TYCSQDVAIKVLKPERINSDMQKEFAQEVFIMRKVRHKNVVQFIGA 357
+ SG+ G + T +VA+K L N K +E+ +++ V HKN++ +
Sbjct: 30 IGSGAQGIVCAAFDTVLGINVAVKKLSRPFQNQTHAKRAYRELVLLKCVNHKNIISLLNV 89
Query: 358 CTKPPSL------CIVTEFMSGGSVYDYLHKLKGVFKLPSLLKVAIDVSKGMNYLHQNNI 411
T +L +V E M ++ +H ++ LL + G+ +LH I
Sbjct: 90 FTPQKTLEEFQDVYLVMELMDA-NLCQVIHMELDHERMSYLL---YQMLCGIKHLHSAGI 145
Query: 412 IHRDLKAANLLMDENEVSLLLSLCLF-TVSILFCGKGRELISLFLGNDVLLQFG 464
IHRDLK +N+++ + +L L T S F + + +V+L G
Sbjct: 146 IHRDLKPSNIVVKSDCTLKILDFGLARTASTNFMMTPYVVTRYYRAPEVILGMG 199
>pdb|2JAV|A Chain A, Human Kinase With Pyrrole-Indolinone Ligand
pdb|2W5B|A Chain A, Human Nek2 Kinase Atpgammas-bound
pdb|2W5H|A Chain A, Human Nek2 Kinase Apo
Length = 279
Score = 38.5 bits (88), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 37/138 (26%), Positives = 63/138 (45%), Gaps = 14/138 (10%)
Query: 300 VASGSYGDLYRGTYCSQDVAIKVLKPERINSDMQKE---FAQEVFIMRKVRHKNVVQFIG 356
+ +GSYG + S D I V K S + E EV ++R+++H N+V++
Sbjct: 14 IGTGSYGRCQKIRRKS-DGKILVWKELDYGSMTEAEKQMLVSEVNLLRELKHPNIVRYYD 72
Query: 357 ACT--KPPSLCIVTEFMSGG---SVYDYLHKLKGVFKLPSLLKVAIDVSKGMNYLHQ--- 408
+L IV E+ GG SV K + +L+V ++ + H+
Sbjct: 73 RIIDRTNTTLYIVMEYCEGGDLASVITKGTKERQYLDEEFVLRVMTQLTLALKECHRRSD 132
Query: 409 --NNIIHRDLKAANLLMD 424
+ ++HRDLK AN+ +D
Sbjct: 133 GGHTVLHRDLKPANVFLD 150
>pdb|3SOA|A Chain A, Full-Length Human Camkii
Length = 444
Score = 38.5 bits (88), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 24/133 (18%), Positives = 63/133 (47%), Gaps = 13/133 (9%)
Query: 315 SQDVAIKVLKPERINSDMQKEFAQEVFIMRKVRHKNVVQFIGACTKPPSLCIVTEFMSGG 374
Q+ A ++ +++++ ++ +E I R ++H N+V+ + ++ ++ + ++GG
Sbjct: 36 GQEYAAMIINTKKLSARDHQKLEREARICRLLKHPNIVRLHDSISEEGHHYLIFDLVTGG 95
Query: 375 SVY------DYLHKLKGVFKLPSLLKVAIDVSKGMNYLHQNNIIHRDLKAANLLMDENEV 428
++ +Y + + +L+ + + HQ ++HR+LK NLL+
Sbjct: 96 ELFEDIVAREYYSEADASHCIQQILEAVL-------HCHQMGVVHRNLKPENLLLASKLK 148
Query: 429 SLLLSLCLFTVSI 441
+ L F ++I
Sbjct: 149 GAAVKLADFGLAI 161
>pdb|1JNK|A Chain A, The C-Jun N-Terminal Kinase (Jnk3s) Complexed With
Mgamp-Pnp
Length = 423
Score = 38.5 bits (88), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 32/118 (27%), Positives = 56/118 (47%), Gaps = 18/118 (15%)
Query: 316 QDVAIKVLKPERINSDMQKEFAQEVFIMRKVRHKNVVQFIGACTKPPSLCIVTEFMSGGS 375
++VAIK L N K +E+ +M+ V HKN++ + T +L EF
Sbjct: 88 RNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLLNVFTPQKTL---EEFQD--- 141
Query: 376 VYDYLHKLKGVFKLPSLLKVAIDVSK----------GMNYLHQNNIIHRDLKAANLLM 423
VY + + L ++++ +D + G+ +LH IIHRDLK +N+++
Sbjct: 142 VYLVMELMDA--NLCQVIQMELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVV 197
>pdb|2W5A|A Chain A, Human Nek2 Kinase Adp-Bound
pdb|2WQO|A Chain A, Structure Of Nek2 Bound To The Aminopyridine Cct241950
pdb|2XK3|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 35
pdb|2XK4|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 17
pdb|2XK6|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 36
pdb|2XK7|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 23
pdb|2XK8|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 15
pdb|2XKC|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 14
pdb|2XKD|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 12
pdb|2XKF|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 2
pdb|2XKE|A Chain A, Structure Of Nek2 Bound To Aminipyrazine Compound 5
pdb|2XNM|A Chain A, Structure Of Nek2 Bound To Cct
pdb|2XNN|A Chain A, Structure Of Nek2 Bound To Cct242430
pdb|2XNO|A Chain A, Structure Of Nek2 Bound To Cct243779
pdb|2XNP|A Chain A, Structure Of Nek2 Bound To Cct244858
pdb|4AFE|A Chain A, Nek2 Bound To Hybrid Compound 21
Length = 279
Score = 38.5 bits (88), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 37/138 (26%), Positives = 63/138 (45%), Gaps = 14/138 (10%)
Query: 300 VASGSYGDLYRGTYCSQDVAIKVLKPERINSDMQKE---FAQEVFIMRKVRHKNVVQFIG 356
+ +GSYG + S D I V K S + E EV ++R+++H N+V++
Sbjct: 14 IGTGSYGRCQKIRRKS-DGKILVWKELDYGSMTEAEKQMLVSEVNLLRELKHPNIVRYYD 72
Query: 357 ACT--KPPSLCIVTEFMSGG---SVYDYLHKLKGVFKLPSLLKVAIDVSKGMNYLHQ--- 408
+L IV E+ GG SV K + +L+V ++ + H+
Sbjct: 73 RIIDRTNTTLYIVMEYCEGGDLASVITKGTKERQYLDEEFVLRVMTQLTLALKECHRRSD 132
Query: 409 --NNIIHRDLKAANLLMD 424
+ ++HRDLK AN+ +D
Sbjct: 133 GGHTVLHRDLKPANVFLD 150
>pdb|4H36|A Chain A, Crystal Structure Of Jnk3 In Complex With Atf2 Peptide
pdb|4H39|A Chain A, Crystal Structure Of Jnk3 In Complex With Jip1 Peptide
pdb|4H3B|A Chain A, Crystal Structure Of Jnk3 In Complex With Sab Peptide
pdb|4H3B|C Chain C, Crystal Structure Of Jnk3 In Complex With Sab Peptide
Length = 356
Score = 38.1 bits (87), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 32/118 (27%), Positives = 56/118 (47%), Gaps = 18/118 (15%)
Query: 316 QDVAIKVLKPERINSDMQKEFAQEVFIMRKVRHKNVVQFIGACTKPPSLCIVTEFMSGGS 375
++VAIK L N K +E+ +M+ V HKN++ + T +L EF
Sbjct: 44 RNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLLNVFTPQKTL---EEFQD--- 97
Query: 376 VYDYLHKLKGVFKLPSLLKVAIDVSK----------GMNYLHQNNIIHRDLKAANLLM 423
VY + + L ++++ +D + G+ +LH IIHRDLK +N+++
Sbjct: 98 VYLVMELMDA--NLCQVIQMELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVV 153
>pdb|2B1P|A Chain A, Inhibitor Complex Of Jnk3
Length = 355
Score = 38.1 bits (87), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 32/118 (27%), Positives = 56/118 (47%), Gaps = 18/118 (15%)
Query: 316 QDVAIKVLKPERINSDMQKEFAQEVFIMRKVRHKNVVQFIGACTKPPSLCIVTEFMSGGS 375
++VAIK L N K +E+ +M+ V HKN++ + T +L EF
Sbjct: 43 RNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLLNVFTPQKTL---EEFQD--- 96
Query: 376 VYDYLHKLKGVFKLPSLLKVAIDVSK----------GMNYLHQNNIIHRDLKAANLLM 423
VY + + L ++++ +D + G+ +LH IIHRDLK +N+++
Sbjct: 97 VYLVMELMDA--NLCQVIQMELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVV 152
Database: pdbaa
Posted date: Mar 3, 2013 10:34 PM
Number of letters in database: 14,973,337
Number of sequences in database: 62,578
Lambda K H
0.318 0.135 0.400
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 14,115,818
Number of Sequences: 62578
Number of extensions: 577695
Number of successful extensions: 3314
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 1041
Number of HSP's successfully gapped in prelim test: 62
Number of HSP's that attempted gapping in prelim test: 1286
Number of HSP's gapped (non-prelim): 1162
length of query: 492
length of database: 14,973,337
effective HSP length: 103
effective length of query: 389
effective length of database: 8,527,803
effective search space: 3317315367
effective search space used: 3317315367
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 53 (25.0 bits)