Query 011161
Match_columns 492
No_of_seqs 347 out of 1971
Neff 8.1
Searched_HMMs 29240
Date Mon Mar 25 22:04:20 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/011161.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/011161hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3kwu_A MUNC13-1; calcium bindi 99.8 3.4E-19 1.2E-23 158.3 18.4 119 8-126 11-146 (148)
2 2ep6_A MCTP2 protein; beta san 99.8 1.4E-19 4.7E-24 157.9 14.8 120 8-127 7-132 (133)
3 2fk9_A Protein kinase C, ETA t 99.8 1.8E-19 6.2E-24 161.5 12.7 114 11-126 26-156 (157)
4 2dmh_A Myoferlin; beta-sandwic 99.8 2.1E-18 7E-23 151.7 16.9 119 11-130 4-136 (140)
5 3b7y_A E3 ubiquitin-protein li 99.8 2.2E-18 7.6E-23 153.9 16.6 120 8-127 14-153 (153)
6 1wfj_A Putative elicitor-respo 99.8 1.2E-18 4E-23 152.5 13.9 121 9-129 5-132 (136)
7 1gmi_A Protein kinase C, epsil 99.8 8.8E-19 3E-23 153.5 13.1 114 12-127 4-133 (136)
8 3m7f_B E3 ubiquitin-protein li 99.8 4.9E-18 1.7E-22 155.5 16.8 120 9-128 3-142 (176)
9 1rlw_A Phospholipase A2, CALB 99.8 8.4E-18 2.9E-22 144.9 14.4 112 13-126 2-122 (126)
10 3pyc_A E3 ubiquitin-protein li 99.8 1.4E-17 4.9E-22 144.9 15.8 112 13-125 4-131 (132)
11 2b3r_A Phosphatidylinositol-4- 99.7 5.1E-17 1.8E-21 141.9 14.0 102 12-114 18-130 (134)
12 2nq3_A Itchy homolog E3 ubiqui 99.7 6.5E-17 2.2E-21 147.6 15.1 117 11-128 33-162 (173)
13 2z0u_A WW domain-containing pr 99.7 1.7E-17 5.8E-22 148.8 10.4 103 12-114 41-155 (155)
14 3f04_A Synaptotagmin-1; C2A, c 99.7 3.9E-17 1.3E-21 144.1 11.3 103 12-114 32-142 (143)
15 1rsy_A Synaptotagmin I; calciu 99.7 8E-17 2.8E-21 143.7 13.1 103 12-114 40-150 (152)
16 2bwq_A Regulating synaptic mem 99.7 6.7E-17 2.3E-21 139.8 12.1 102 12-113 16-129 (129)
17 3fdw_A Synaptotagmin-like prot 99.7 3.2E-17 1.1E-21 145.6 10.0 104 12-115 21-135 (148)
18 3rdl_A Protein kinase C alpha 99.7 7.3E-17 2.5E-21 141.0 11.9 103 12-114 14-124 (137)
19 1a25_A CALB, protein kinase C 99.7 9.5E-17 3.3E-21 142.7 12.5 102 13-114 30-139 (149)
20 2d8k_A Synaptotagmin VII; exoc 99.7 1.3E-16 4.3E-21 140.5 13.1 104 12-115 24-136 (141)
21 1rh8_A Piccolo protein; beta-s 99.7 3.7E-17 1.3E-21 144.0 8.8 104 13-116 17-140 (142)
22 3fbk_A RGS3, RGP3, regulator o 99.7 1.8E-16 6E-21 141.7 12.7 103 12-115 25-138 (153)
23 2q3x_A Regulating synaptic mem 99.7 1.1E-16 3.7E-21 145.8 11.4 103 13-115 29-140 (171)
24 1v27_A Regulating synaptic mem 99.7 1.3E-16 4.5E-21 140.1 10.6 103 12-114 19-133 (141)
25 1wfm_A Synaptotagmin XIII; C2 99.7 4.2E-16 1.4E-20 136.8 13.0 100 12-114 24-132 (138)
26 1ugk_A Synaptotagmin IV, KIAA1 99.7 4E-16 1.4E-20 136.7 12.5 104 12-115 20-134 (138)
27 2chd_A Rabphilin-3A, exophilin 99.7 3.4E-16 1.2E-20 137.8 11.9 103 12-114 27-140 (142)
28 3n5a_A Synaptotagmin-7; calciu 99.7 6E-16 2E-20 135.3 12.6 104 11-114 13-124 (138)
29 2dmg_A KIAA1228 protein; beta- 99.7 2.4E-16 8.1E-21 138.8 10.0 104 12-116 22-137 (142)
30 2cm5_A Rabphilin-3A; protein t 99.7 1.1E-16 3.8E-21 144.9 7.5 103 12-114 35-145 (166)
31 1tjx_A Similar to synaptotagmi 99.7 1E-15 3.6E-20 137.4 13.7 103 12-114 23-147 (159)
32 2enp_A B/K protein; C2 type 1, 99.6 3.9E-16 1.3E-20 138.3 9.8 104 12-115 24-142 (147)
33 1w15_A Synaptotagmin IV; metal 99.6 2.1E-16 7.2E-21 141.0 7.9 103 12-114 28-138 (153)
34 2r83_A Synaptotagmin-1; C2A-C2 99.6 4.5E-15 1.5E-19 145.9 17.8 116 12-127 17-147 (284)
35 3jzy_A Intersectin 2; C2 domai 99.6 1E-14 3.5E-19 155.2 15.4 117 10-126 383-507 (510)
36 1dqv_A Synaptotagmin III; beta 99.6 1.2E-14 4E-19 144.1 14.8 116 12-127 18-149 (296)
37 3nsj_A Perforin-1; pore formin 99.6 1.5E-14 5.1E-19 153.6 15.4 110 12-126 392-503 (540)
38 2cjt_A UNC-13 homolog A, MUNC1 99.5 2.6E-14 8.9E-19 124.2 11.5 84 13-102 4-88 (131)
39 2cjs_A UNC-13 homolog A, MUNC1 99.5 6.8E-14 2.3E-18 126.7 12.3 84 13-102 13-97 (167)
40 2r83_A Synaptotagmin-1; C2A-C2 99.5 2.1E-13 7.3E-18 133.9 13.6 103 12-114 148-272 (284)
41 1djx_A PLC-D1, phosphoinositid 99.4 1.1E-12 3.6E-17 142.3 17.0 106 12-118 495-609 (624)
42 1cjy_A CPLA2, protein (cytosol 99.4 3.4E-13 1.2E-17 147.5 11.7 106 9-115 13-127 (749)
43 3l9b_A Otoferlin; C2-domain, b 99.4 2.7E-12 9.3E-17 111.0 13.9 115 8-127 15-140 (144)
44 1dqv_A Synaptotagmin III; beta 99.4 1.4E-13 4.6E-18 136.4 3.6 102 12-113 150-260 (296)
45 3bxj_A RAS GTPase-activating p 99.3 2.2E-13 7.6E-18 143.7 -1.4 99 10-113 7-115 (483)
46 3pfq_A PKC-B, PKC-beta, protei 99.2 1.8E-11 6.3E-16 134.5 9.8 102 13-114 171-280 (674)
47 3qr0_A Phospholipase C-beta (P 99.1 1.4E-09 4.7E-14 120.3 15.6 106 13-127 649-771 (816)
48 3ohm_B 1-phosphatidylinositol- 99.0 1.3E-09 4.3E-14 121.3 13.6 106 13-127 724-845 (885)
49 2zkm_X 1-phosphatidylinositol- 99.0 2.8E-09 9.7E-14 118.3 14.6 98 12-118 676-784 (799)
50 1yrk_A NPKC-delta, protein kin 99.0 1.1E-08 3.6E-13 86.0 14.3 108 13-126 5-124 (126)
51 2enj_A NPKC-theta, protein kin 98.9 1.2E-08 4.2E-13 86.7 12.2 113 9-127 5-130 (138)
52 2hth_B Vacuolar protein sortin 93.3 1 3.6E-05 38.5 11.6 90 192-284 39-131 (140)
53 2cay_A VPS36 PH domain, vacuol 93.0 0.46 1.6E-05 41.0 9.0 84 191-283 51-134 (145)
54 1zsq_A Myotubularin-related pr 87.5 3.9 0.00013 42.8 11.7 54 190-243 31-88 (528)
55 2yf0_A Myotubularin-related pr 86.8 1.9 6.6E-05 44.8 8.9 53 189-244 23-75 (512)
56 1lw3_A Myotubularin-related pr 85.8 5.2 0.00018 42.8 11.7 74 170-243 80-160 (657)
57 3l4c_A Dedicator of cytokinesi 83.6 19 0.00064 33.0 13.0 55 48-102 79-140 (220)
58 1pfj_A TFIIH basal transcripti 83.3 6.7 0.00023 31.7 8.7 92 173-283 5-102 (108)
59 2wxf_A Phosphatidylinositol-4, 78.6 16 0.00054 41.0 12.7 87 13-102 216-324 (940)
60 1em2_A MLN64 protein; beta bar 71.5 41 0.0014 30.4 11.9 78 386-467 142-225 (229)
61 3hhm_A Phosphatidylinositol-4, 67.9 35 0.0012 38.7 12.1 87 14-102 355-455 (1091)
62 1t77_A Lipopolysaccharide-resp 66.4 11 0.00039 37.9 7.1 67 177-244 3-85 (414)
63 2r55_A STAR-related lipid tran 61.5 92 0.0031 28.0 13.9 80 383-466 142-227 (231)
64 1ln1_A PC-TP, phosphatidylchol 61.0 77 0.0026 28.0 11.3 73 390-466 132-208 (214)
65 1e7u_A Phosphatidylinositol 3- 60.6 61 0.0021 36.4 12.3 88 14-102 218-330 (961)
66 2pcs_A Conserved protein; stru 57.9 82 0.0028 26.2 12.7 73 388-471 74-148 (162)
67 3p0l_A Steroidogenic acute reg 56.1 82 0.0028 28.2 10.7 77 386-470 131-213 (221)
68 2wql_A Major allergen DAU C 1; 55.8 96 0.0033 26.4 12.5 105 352-472 50-154 (154)
69 3p9v_A Uncharacterized protein 54.0 59 0.002 27.5 8.9 59 408-471 93-151 (161)
70 3qsz_A STAR-related lipid tran 51.1 87 0.003 27.0 9.7 77 384-466 98-178 (189)
71 2ns9_A Hypothetical protein AP 51.1 1E+02 0.0035 25.3 12.5 57 406-470 97-155 (157)
72 2y3a_A Phosphatidylinositol-4, 48.6 23 0.00078 40.3 6.4 68 14-84 353-430 (1092)
73 1zyi_A Methylosome subunit pic 48.1 18 0.00062 31.8 4.4 56 183-241 34-91 (171)
74 2pso_A STAR-related lipid tran 47.5 1.1E+02 0.0037 28.0 10.0 79 385-472 147-228 (237)
75 3fss_A Histone chaperone RTT10 44.9 43 0.0015 30.8 6.4 69 181-271 158-226 (237)
76 2d4r_A Hypothetical protein TT 42.0 75 0.0026 25.3 7.4 58 410-472 88-145 (147)
77 3tvq_A Multifunctional cyclase 41.7 50 0.0017 28.6 6.4 30 402-438 87-116 (169)
78 1jss_A Stard4, cholesterol-reg 41.6 1.9E+02 0.0065 25.8 11.2 68 389-461 145-217 (224)
79 2gcl_A Hypothetical 63.0 kDa p 40.7 73 0.0025 29.9 7.6 69 181-272 167-240 (261)
80 1icx_A Protein LLR18A, LLPR10. 38.4 1.8E+02 0.0061 24.4 13.8 105 353-474 50-154 (155)
81 2yrb_A Protein fantom; beta sa 37.8 1E+02 0.0034 26.5 7.4 92 9-102 13-116 (156)
82 4a8u_A Major pollen allergen B 35.5 2E+02 0.007 24.3 13.9 107 352-475 50-157 (159)
83 3rws_A MTN13 protein; zeatin, 34.0 2.3E+02 0.0077 24.4 13.9 103 352-475 56-163 (168)
84 2flh_A Cytokinin-specific bind 31.1 2.4E+02 0.0081 23.7 10.1 100 352-473 50-154 (155)
85 1t17_A Conserved hypothetical 30.1 72 0.0025 26.3 5.3 33 409-446 91-123 (148)
86 1w7p_D VPS36P, YLR417W; ESCRT- 30.0 11 0.00037 39.6 0.0 39 193-231 45-83 (566)
87 2e3n_A Lipid-transfer protein 27.7 2.7E+02 0.0094 25.2 9.4 80 388-471 156-250 (255)
88 1yfn_A Stringent starvation pr 25.9 1E+02 0.0034 25.2 5.0 38 193-230 61-98 (118)
89 1ou9_A Stringent starvation pr 24.8 1.1E+02 0.0036 25.4 5.0 38 193-230 60-97 (129)
90 1tw0_A Pathogenesis-related cl 23.5 3.3E+02 0.011 22.8 15.3 106 353-474 50-155 (157)
91 1ou8_A Stringent starvation pr 23.3 1.5E+02 0.0052 23.8 5.6 38 193-230 60-97 (111)
92 2vjg_A Major allergen DAU C 1; 23.0 3.4E+02 0.012 22.8 14.3 105 352-472 50-154 (154)
93 2qim_A PR10.2B; trans-zeatin, 22.6 3.4E+02 0.012 22.7 14.8 106 352-474 50-156 (158)
No 1
>3kwu_A MUNC13-1; calcium binding protein, phospholipid binding protein, metal binding protein; HET: GOL; 1.37A {Rattus norvegicus} SCOP: b.7.1.0 PDB: 3kwt_A*
Probab=99.82 E-value=3.4e-19 Score=158.32 Aligned_cols=119 Identities=29% Similarity=0.482 Sum_probs=105.3
Q ss_pred CCCCCceEEEEEEEEeecCCCCCCCCCCCcEEEEEECCeeeeeeccCCCCCCeeccEEEEEeeCCCcEEEEEEEEcCCC-
Q 011161 8 PQTNSAYLIKLELLAAKNLIGANLNGTSDPYAIITCGSEKRFSSMVPGSRYPMWGEEFNFSVDELPVQIIVTIYDWDII- 86 (492)
Q Consensus 8 ~~~~~~~~L~V~Vi~a~~L~~~d~~g~sDPyv~v~~~~~~~~T~~~~~t~nP~W~e~f~f~i~~~~~~L~i~v~d~d~~- 86 (492)
..+...+.|.|+|++|++|+++|..|.+||||++.+++...+|+++++++||.|+|+|.|.+..+...|.|+|||+|..
T Consensus 11 ~~~~~~~~L~V~v~~a~~L~~~d~~g~~dpyv~v~~~~~~~kT~~~~~t~nP~Wne~f~f~v~~~~~~l~~~v~d~d~~~ 90 (148)
T 3kwu_A 11 GTSKWSAKISITVVCAQGLQAKDKTGSSDPYVTVQVGKTKKRTKTIYGNLNPVWEENFHFECHNSSDRIKVRVLDEDDDI 90 (148)
T ss_dssp ----CCEEEEEEEEEEESCCCCSTTSCCCEEEEEEETTEEEECCCCCSCSSCEEEEEEEEEECSTTCEEEEEEEECCCSH
T ss_pred cccccccEEEEEEEeeeCCCCCCCCCCcCeEEEEEECCEEEECCccCCCCCCCcccEEEEEecCCCCEEEEEEEECCCCc
Confidence 3344579999999999999999999999999999999999999999999999999999999987778899999999986
Q ss_pred ----------CCCceeEEEEEEcccCCCcccEEEEccC------CCceEEEEEEee
Q 011161 87 ----------WKSTVLGSVIVTVESEGQTGAVWYTLDS------PSGQVCLHIKTI 126 (492)
Q Consensus 87 ----------~~dd~IG~~~i~l~~l~~~~~~w~~L~~------~~G~i~l~l~~~ 126 (492)
+++++||++.+++.++....+.|++|.+ ..|+|++++.+.
T Consensus 91 ~~~~~~~~~~~~~~~lG~~~i~l~~l~~~~~~w~~L~~~~~~~~~~G~i~l~l~~e 146 (148)
T 3kwu_A 91 KSRVKQRFKRESDDFLGQTIIEVRTLSGEMDVWYNLDKRTDKSAVSGAIRLHISVE 146 (148)
T ss_dssp HHHHHTTTSSCSSEEEEEEEEEGGGCCSEEEEEEECBCSSTTCCCCCEEEEEEEEE
T ss_pred cccccccccCCCCccEEEEEEEHHHCcCCCCEEEEcccCCCCCCCceEEEEEEEEE
Confidence 7899999999999999777789999985 248888888764
No 2
>2ep6_A MCTP2 protein; beta sandwich, Ca2+ binding, membrane binding, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.7.1.1
Probab=99.82 E-value=1.4e-19 Score=157.92 Aligned_cols=120 Identities=23% Similarity=0.412 Sum_probs=108.4
Q ss_pred CCCCCceEEEEEEEEeecCCCCCCCCCCCcEEEEEECCeeeeeeccCCCCCCeeccEEEEEeeCCCcEEEEEEEEcCCCC
Q 011161 8 PQTNSAYLIKLELLAAKNLIGANLNGTSDPYAIITCGSEKRFSSMVPGSRYPMWGEEFNFSVDELPVQIIVTIYDWDIIW 87 (492)
Q Consensus 8 ~~~~~~~~L~V~Vi~a~~L~~~d~~g~sDPyv~v~~~~~~~~T~~~~~t~nP~W~e~f~f~i~~~~~~L~i~v~d~d~~~ 87 (492)
......+.|.|+|++|++|++++..|.+||||++.+++++.+|+++++++||.|||+|.|.+.++...|.|+|||++..+
T Consensus 7 ~~~~~~~~L~v~v~~a~~L~~~d~~g~~dpyv~v~~~~~~~kT~~~~~t~nP~wne~f~f~~~~~~~~l~i~V~d~d~~~ 86 (133)
T 2ep6_A 7 GDVKDVGILQVKVLKAADLLAADFSGKSDPFCLLELGNDRLQTHTVYKNLNPEWNKVFTFPIKDIHDVLEVTVFDEDGDK 86 (133)
T ss_dssp CSCCCSEEEEEEEEEEESCCCSSSSSCCCEEEEEEETTEEEECCCCSSCSSCCCCEEEEEEESCTTCEEEEEEEEEETTE
T ss_pred cccCCceEEEEEEEeeECCCCCCCCCCcCeEEEEEECCEEEEeeeecCCCCCccccEEEEEecCCCCEEEEEEEECCCCC
Confidence 44566799999999999999999999999999999999999999999999999999999999877788999999999998
Q ss_pred CCceeEEEEEEcccCCCcccEEEEccC------CCceEEEEEEeee
Q 011161 88 KSTVLGSVIVTVESEGQTGAVWYTLDS------PSGQVCLHIKTIK 127 (492)
Q Consensus 88 ~dd~IG~~~i~l~~l~~~~~~w~~L~~------~~G~i~l~l~~~~ 127 (492)
++++||++.+++.++......|++|.. ..|+|++++++.+
T Consensus 87 ~~~~lG~~~i~l~~l~~~~~~w~~L~~~~~~~~~~G~i~l~i~~~~ 132 (133)
T 2ep6_A 87 PPDFLGKVAIPLLSIRDGQPNCYVLKNKDLEQAFKGVIYLEMDLIY 132 (133)
T ss_dssp EEEECCBCEEEGGGCCSSCCEECCCBCSCTTSCCSSEEEEEEEEEE
T ss_pred CCCeeEEEEEEHHHccCCCceEEEeecCCCCCccceEEEEEEEEEe
Confidence 999999999999999666689999975 3488998888763
No 3
>2fk9_A Protein kinase C, ETA type; ATP-binding, metal-binding, nucleotide-binding, diacylglycerol binding, serine/threonine-protein kinase, transferase; 1.75A {Homo sapiens}
Probab=99.80 E-value=1.8e-19 Score=161.47 Aligned_cols=114 Identities=15% Similarity=0.222 Sum_probs=100.3
Q ss_pred CCceEEEEEEEEeecCCCCCC----------CCCCCcEEEEEECCee-eeeeccCCCCCCeeccEEEEEeeCCCcEEEEE
Q 011161 11 NSAYLIKLELLAAKNLIGANL----------NGTSDPYAIITCGSEK-RFSSMVPGSRYPMWGEEFNFSVDELPVQIIVT 79 (492)
Q Consensus 11 ~~~~~L~V~Vi~a~~L~~~d~----------~g~sDPyv~v~~~~~~-~~T~~~~~t~nP~W~e~f~f~i~~~~~~L~i~ 79 (492)
...|.|+|+|++|++|+++|. .+.+||||++.+++.+ .+|+++++++||.|||+|.|.+.+ ...|.|+
T Consensus 26 ~~~g~L~V~VieA~~L~~~D~~~~~~~f~~~~g~sDPYv~v~l~~~~~~kT~v~~ktlnP~WNE~F~f~v~~-~~~L~~~ 104 (157)
T 2fk9_A 26 KFNGYLRVRIGEAVGLQPTRWSLRHSLFKKGHQLLDPYLTVSVDQVRVGQTSTKQKTNKPTYNEEFCANVTD-GGHLELA 104 (157)
T ss_dssp CEEEEEEEEEEEEECCCCCHHHHHTTTSSSSCCCCCEEEEEEETTEEEEECCCCSSCSSCEEEEEEEEEEEE-ECEEEEE
T ss_pred cCccEEEEEEEEEECCCCccccccccccccCCCCCCeEEEEEECCEeeEEeeecCCCCCCccCcEEEEEcCC-CCEEEEE
Confidence 457899999999999999883 2679999999998866 589999999999999999999865 4689999
Q ss_pred EEEcCCCCCCceeEEEEEEcccC--C----CcccEEEEccCCCceEEEEEEee
Q 011161 80 IYDWDIIWKSTVLGSVIVTVESE--G----QTGAVWYTLDSPSGQVCLHIKTI 126 (492)
Q Consensus 80 v~d~d~~~~dd~IG~~~i~l~~l--~----~~~~~w~~L~~~~G~i~l~l~~~ 126 (492)
|||+|.++++++||++.|++.++ + ...+.|++|.+ .|+|++++++.
T Consensus 105 V~D~d~~~~dd~iG~~~i~l~~l~~~~~~~~~~~~W~~L~~-~G~i~l~l~~~ 156 (157)
T 2fk9_A 105 VFHETPLGYDHFVANCTLQFQELLRTTGASDTFEGWVDLEP-EGKVFVVITLT 156 (157)
T ss_dssp EEECCSSSSCEEEEEEEEEHHHHHHHHTTCSEEEEEEECBS-SCEEEEEEEEC
T ss_pred EEECCCCCCCCEEEEEEEEHHHhhcccCCCCcccEEEECCC-CcEEEEEEEEE
Confidence 99999999999999999999987 2 44689999986 89999988764
No 4
>2dmh_A Myoferlin; beta-sandwich, FER-1-like protein 3, muscular dystrophy, cardiomyopathy, membrane fusion, dystrophin, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.79 E-value=2.1e-18 Score=151.68 Aligned_cols=119 Identities=18% Similarity=0.318 Sum_probs=103.1
Q ss_pred CCceEEEEEEEEeecCCCCCCCCCCCcEEEEEECCeeeeeeccCCCCCCeeccEEEEEeeC----CCcEEEEEEEEcCCC
Q 011161 11 NSAYLIKLELLAAKNLIGANLNGTSDPYAIITCGSEKRFSSMVPGSRYPMWGEEFNFSVDE----LPVQIIVTIYDWDII 86 (492)
Q Consensus 11 ~~~~~L~V~Vi~a~~L~~~d~~g~sDPyv~v~~~~~~~~T~~~~~t~nP~W~e~f~f~i~~----~~~~L~i~v~d~d~~ 86 (492)
...+.|.|+|++|++|+.++. +.+||||++++.+++.+|+++++++||.|||+|.|.+.. ....|.|+|||+|..
T Consensus 4 ~~~g~L~v~v~~a~~L~~~~~-g~~dpyv~v~~~~~~~kT~v~~~t~nP~wne~f~f~v~~~~~~~~~~l~i~V~d~d~~ 82 (140)
T 2dmh_A 4 GSSGMLRVIVESASNIPKTKF-GKPDPIVSVIFKDEKKKTKKVDNELNPVWNEILEFDLRGIPLDFSSSLGIIVKDFETI 82 (140)
T ss_dssp CBCCEEEEEEEEEESCCCCSS-SCCCEEEEEECSSCEEECCCCCSCSSCEEEEEEEEECSSCCCCTTCEEEEEEEETTCS
T ss_pred CCCcEEEEEEEEeeCCCCCCC-CCCCeEEEEEECCEeEEeeeecCCCCCccCcEEEEEecccccCCCCEEEEEEEECCCC
Confidence 567899999999999999998 999999999999989999999999999999999999864 356799999999999
Q ss_pred CCCceeEEEEEEcccC--CCcccEEEE---ccCC-----CceEEEEEEeeeCcc
Q 011161 87 WKSTVLGSVIVTVESE--GQTGAVWYT---LDSP-----SGQVCLHIKTIKLPV 130 (492)
Q Consensus 87 ~~dd~IG~~~i~l~~l--~~~~~~w~~---L~~~-----~G~i~l~l~~~~~~~ 130 (492)
+++++||++.+++.++ +...+.|+. |... .|+|++++.+.+.+.
T Consensus 83 ~~~~~lG~~~i~l~~l~~~~~~~~w~~l~~l~~~~~~~~~G~l~l~~~~~p~~~ 136 (140)
T 2dmh_A 83 GQNKLIGTATVALKDLTGDQSRSLPYKLISLLNEKGQDTGATIDLVIGYDPPSG 136 (140)
T ss_dssp SSCCCCEEEEEEGGGTCSSSCEEEEEEEEEEECTTCCEEEEEEEEEEEECCCBS
T ss_pred CCCceEEEEEEEHHHhccCCCceeEEeeeeccCCCCCCCCCEEEEEEEEECCCC
Confidence 9999999999999998 444578988 5432 278888888876544
No 5
>3b7y_A E3 ubiquitin-protein ligase NEDD4; C2 domain, UBL-conjugation pathway, structural genomics consortium, SGC, cytoplasm; 1.80A {Homo sapiens} PDB: 2nsq_A
Probab=99.79 E-value=2.2e-18 Score=153.88 Aligned_cols=120 Identities=19% Similarity=0.326 Sum_probs=96.8
Q ss_pred CCCCCceEEEEEEEEeecCCCCCCCCCCCcEEEEEECC------eeeeeeccCCCCCCeeccEEEEEeeCCCcEEEEEEE
Q 011161 8 PQTNSAYLIKLELLAAKNLIGANLNGTSDPYAIITCGS------EKRFSSMVPGSRYPMWGEEFNFSVDELPVQIIVTIY 81 (492)
Q Consensus 8 ~~~~~~~~L~V~Vi~a~~L~~~d~~g~sDPyv~v~~~~------~~~~T~~~~~t~nP~W~e~f~f~i~~~~~~L~i~v~ 81 (492)
......+.|.|+|++|++|+.++..+.+||||++.+.. ...+|+++++++||.|||+|.|.+......|.|+||
T Consensus 14 ~~~~~~~~L~V~v~~a~~L~~~d~~g~~dpyv~v~~~~~~~~~~~~~kT~v~~~t~nP~wne~f~f~v~~~~~~l~~~V~ 93 (153)
T 3b7y_A 14 EDEENSRIVRVRVIAGIGLAKKDILGASDPYVRVTLYDPMNGVLTSVQTKTIKKSLNPKWNEEILFRVHPQQHRLLFEVF 93 (153)
T ss_dssp SCCTTCEEEEEEEEEEESCC-------CCEEEEEEEEETTTEEEEEEECCCCSSCSSCCCCEEEEEEECTTTCEEEEEEE
T ss_pred cCCCCccEEEEEEEEeeCCCCCCCCCCCCcEEEEEEECCCCccceeeeCccccCCCCCCCCCEEEEEecCCCCEEEEEEE
Confidence 34566789999999999999999899999999999863 467999999999999999999999876778999999
Q ss_pred EcCCCCCCceeEEEEEEcccCC--Cc------ccEEEEccCC------CceEEEEEEeee
Q 011161 82 DWDIIWKSTVLGSVIVTVESEG--QT------GAVWYTLDSP------SGQVCLHIKTIK 127 (492)
Q Consensus 82 d~d~~~~dd~IG~~~i~l~~l~--~~------~~~w~~L~~~------~G~i~l~l~~~~ 127 (492)
|++..+++++||++.+++.++. .. ...|++|.++ .|+|++++.+.+
T Consensus 94 d~d~~~~d~~iG~~~i~l~~l~~~~~~~~~~~~~~w~~L~~~~~~~~~~G~i~l~l~~~P 153 (153)
T 3b7y_A 94 DENRLTRDDFLGQVDVPLYPLPTENPRLERPYTFKDFVLHPRSHKSRVKGYLRLKMTYLP 153 (153)
T ss_dssp ECCSSSCCEEEEEEEEECCSCCBCCTTSCCCCCCEEEECBCSSTTCCCCSEEEEEEEECC
T ss_pred ECCCCcCCCeeEEEEEEHHHcccCCCcccccccccccccccccCCCCcceEEEEEEEEeC
Confidence 9999999999999999999882 21 1489999763 488888887753
No 6
>1wfj_A Putative elicitor-responsive gene; C2 domain, riken structural genomics/proteomics initiative, RSGI, structural genomics, plant protein; NMR {Arabidopsis thaliana} SCOP: b.7.1.2
Probab=99.79 E-value=1.2e-18 Score=152.46 Aligned_cols=121 Identities=21% Similarity=0.369 Sum_probs=106.3
Q ss_pred CCCCceEEEEEEEEeecCCCCCCCCCCCcEEEEEECCeeeeeeccC-CCCCCeeccEEEEEeeCCCcEEEEEEEEcCCCC
Q 011161 9 QTNSAYLIKLELLAAKNLIGANLNGTSDPYAIITCGSEKRFSSMVP-GSRYPMWGEEFNFSVDELPVQIIVTIYDWDIIW 87 (492)
Q Consensus 9 ~~~~~~~L~V~Vi~a~~L~~~d~~g~sDPyv~v~~~~~~~~T~~~~-~t~nP~W~e~f~f~i~~~~~~L~i~v~d~d~~~ 87 (492)
+....+.|.|+|++|++|+..+..+.+||||++.++....+|++++ +++||.|||+|.|.+.+....|.|+|||++.++
T Consensus 5 ~~~~~~~L~v~v~~a~~L~~~d~~g~~dpyv~v~~~~~~~kT~~~~~~~~nP~Wne~f~f~v~~~~~~l~~~V~d~~~~~ 84 (136)
T 1wfj_A 5 SSGPHGTLEVVLVSAKGLEDADFLNNMDPYVQLTCRTQDQKSNVAEGMGTTPEWNETFIFTVSEGTTELKAKIFDKDVGT 84 (136)
T ss_dssp CCCCEEEEEEEEEEEEECSSCCSSCSSCCCEEEESSSCEEECCCCTTCCSSCEEEEEEEEEEESSCCEEEEEECCSSSCT
T ss_pred CCCCcEEEEEEEEeccCCCCcccCCCcCceEEEEECCccceeEeccCCCCCCccCcEEEEEECCCCCEEEEEEEECCCCC
Confidence 3456899999999999999999999999999999998889999998 899999999999999877778999999999999
Q ss_pred CCceeEEEEEEcccC---CCcccEEEEccC---CCceEEEEEEeeeCc
Q 011161 88 KSTVLGSVIVTVESE---GQTGAVWYTLDS---PSGQVCLHIKTIKLP 129 (492)
Q Consensus 88 ~dd~IG~~~i~l~~l---~~~~~~w~~L~~---~~G~i~l~l~~~~~~ 129 (492)
++++||++.+++.++ +.....||+|.. ..|+|++++.+.+..
T Consensus 85 ~d~~lG~~~i~l~~l~~~~~~~~~w~~L~~~~~~~G~i~l~l~~~p~~ 132 (136)
T 1wfj_A 85 EDDAVGEATIPLEPVFVEGSIPPTAYNVVKDEEYKGEIWVALSFKPSG 132 (136)
T ss_dssp TTCCSEEEEEESHHHHHHSEEEEEEEEEEETTEEEEEEEEEEEEEECC
T ss_pred CCceEEEEEEEHHHhccCCCCCcEEEEeecCCccCEEEEEEEEEEeCC
Confidence 999999999999988 334578999963 247888888877653
No 7
>1gmi_A Protein kinase C, epsilon type; PKC, C2 domain, X-RAY, phospholipids, PKC epsilon.; 1.7A {Rattus rattus} SCOP: b.7.1.1
Probab=99.79 E-value=8.8e-19 Score=153.52 Aligned_cols=114 Identities=18% Similarity=0.238 Sum_probs=99.5
Q ss_pred CceEEEEEEEEeecCCCCCCCCC-----------CCcEEEEEECCee-eeeeccCCCCCCeeccEEEEEeeCCCcEEEEE
Q 011161 12 SAYLIKLELLAAKNLIGANLNGT-----------SDPYAIITCGSEK-RFSSMVPGSRYPMWGEEFNFSVDELPVQIIVT 79 (492)
Q Consensus 12 ~~~~L~V~Vi~a~~L~~~d~~g~-----------sDPyv~v~~~~~~-~~T~~~~~t~nP~W~e~f~f~i~~~~~~L~i~ 79 (492)
..+.|.|+|++|++|+++|..+. +||||++.++... .+|+++.+++||.|||+|.|.+.+. ..|.|+
T Consensus 4 ~~g~L~v~v~~a~~L~~~d~~~~~~~g~~~~~~~~DPyv~v~l~~~~~~~T~~~~~t~nP~WnE~f~f~v~~~-~~L~~~ 82 (136)
T 1gmi_A 4 FNGLLKIKICEAVSLKPTAWSLRDAVGPRPQTFLLDPYIALNVDDSRIGQTATKQKTNSPAWHDEFVTDVCNG-RKIELA 82 (136)
T ss_dssp EEEEEEEEEEEEESCCCCHHHHCC-CCSSCCCCCCCEEEEEEETTEEEEECCCCSSCSSCEEEEEEEEEEEEE-CEEEEE
T ss_pred cceEEEEEEEeCcCCCCcccccccccccccCCcCcCcEEEEEECCeEeeeeeEECCCcCCccCCEEEEEecCC-CEEEEE
Confidence 45899999999999999886544 9999999998765 5899999999999999999998764 789999
Q ss_pred EEEcCCCCCCceeEEEEEEcccCCC----cccEEEEccCCCceEEEEEEeee
Q 011161 80 IYDWDIIWKSTVLGSVIVTVESEGQ----TGAVWYTLDSPSGQVCLHIKTIK 127 (492)
Q Consensus 80 v~d~d~~~~dd~IG~~~i~l~~l~~----~~~~w~~L~~~~G~i~l~l~~~~ 127 (492)
|||+|..+++++||++.+++.++.. ..+.|++|.+ .|++++++++..
T Consensus 83 V~d~d~~~~dd~iG~~~i~l~~l~~~~~~~~~~w~~L~~-~G~i~l~l~~~~ 133 (136)
T 1gmi_A 83 VFHDAPIGYDDFVANCTIQFEELLQNGSRHFEDWIDLEP-EGKVYVIIDLSG 133 (136)
T ss_dssp EEECCSSSSCEEEEEEEEEHHHHTSTTCSEEEEEEECBS-SCEEEEEEEEEE
T ss_pred EEeCCCCCCCCEEEEEEEEHHHhcccCCCCccEEEEcCC-CeEEEEEEEEEe
Confidence 9999999999999999999998732 2378999986 899999998764
No 8
>3m7f_B E3 ubiquitin-protein ligase NEDD4; C2 domain, GRB10, SH2 domain, phosphoprotein, conjugation pathway, signaling protein-ligase complex; 2.00A {Mus musculus}
Probab=99.78 E-value=4.9e-18 Score=155.49 Aligned_cols=120 Identities=20% Similarity=0.315 Sum_probs=97.1
Q ss_pred CCCCceEEEEEEEEeecCCCCCCCCCCCcEEEEEECC------eeeeeeccCCCCCCeeccEEEEEeeCCCcEEEEEEEE
Q 011161 9 QTNSAYLIKLELLAAKNLIGANLNGTSDPYAIITCGS------EKRFSSMVPGSRYPMWGEEFNFSVDELPVQIIVTIYD 82 (492)
Q Consensus 9 ~~~~~~~L~V~Vi~a~~L~~~d~~g~sDPyv~v~~~~------~~~~T~~~~~t~nP~W~e~f~f~i~~~~~~L~i~v~d 82 (492)
.....+.|.|+|++|++|+.++..+.+||||++++.. ...+|+++++++||.|||+|.|.+......|.|+|||
T Consensus 3 ~~~~~g~L~V~v~~a~~L~~~d~~g~~DPyv~v~l~~~~~~~~~~~kT~v~~~t~nP~Wne~f~f~v~~~~~~L~~~V~d 82 (176)
T 3m7f_B 3 HNDDTRVVRVKVIAGIGLAKKDILGASDPYVRVTLYDPMSGILTSVQTKTIKKSLNPKWNEEILFRVLPQRHRILFEVFD 82 (176)
T ss_dssp CCTTCEEEEEEEEEEESCC---CCCCCCEEEEEEEEETTTEEEEEEECCCCSSCSSCEEEEEEEEEECTTTCEEEEEEEE
T ss_pred CCCCcEEEEEEEEEeeCCCCcCCCCCcCcEEEEEEECCCCCcccceeCceECCCCCCcccceEEEEEcCCCCEEEEEEEE
Confidence 4566899999999999999999999999999999864 5679999999999999999999998766789999999
Q ss_pred cCCCCCCceeEEEEEEcccCCCc-cc-------EEEEccCC------CceEEEEEEeeeC
Q 011161 83 WDIIWKSTVLGSVIVTVESEGQT-GA-------VWYTLDSP------SGQVCLHIKTIKL 128 (492)
Q Consensus 83 ~d~~~~dd~IG~~~i~l~~l~~~-~~-------~w~~L~~~------~G~i~l~l~~~~~ 128 (492)
++.+++++|||++.++|..+... .. .||+|.++ .|+|++++.+.+.
T Consensus 83 ~d~~~~d~~lG~~~i~l~~l~~~~~~~~~~~~~~w~~L~~~~~~~~~~G~l~l~l~~~p~ 142 (176)
T 3m7f_B 83 ENRLTRDDFLGQVDVPLYPLPTENPRMERPYTFKDFVLHPRSHKSRVKGYLRLKMTYLPK 142 (176)
T ss_dssp CC----CEEEEEEEEESCSCCBC------CCCCEEEECBCSSTTCCCCSEEEEEEEECC-
T ss_pred CCCCCCCcEEEEEEEEHHHccccCCcccccccccEEEccccCCCCccCEEEEEEEEEEeC
Confidence 99999999999999999998322 11 79999762 4889999988865
No 9
>1rlw_A Phospholipase A2, CALB domain; hydrolase, C2 domain; 2.40A {Homo sapiens} SCOP: b.7.1.1
Probab=99.76 E-value=8.4e-18 Score=144.94 Aligned_cols=112 Identities=20% Similarity=0.362 Sum_probs=95.0
Q ss_pred ceEEEEEEEEeecCCCC---CCCCCCCcEEEEEECC---eeeeeeccCCCCCCeeccEEEEEee-CCCcEEEEEEEEcCC
Q 011161 13 AYLIKLELLAAKNLIGA---NLNGTSDPYAIITCGS---EKRFSSMVPGSRYPMWGEEFNFSVD-ELPVQIIVTIYDWDI 85 (492)
Q Consensus 13 ~~~L~V~Vi~a~~L~~~---d~~g~sDPyv~v~~~~---~~~~T~~~~~t~nP~W~e~f~f~i~-~~~~~L~i~v~d~d~ 85 (492)
.+.|.|+|++|++|+.+ +..|.+||||++.++. ...+|+++++++||.|||+|.|.+. .....|.|+|||++.
T Consensus 2 ~~~L~v~v~~a~~L~~~~~~d~~g~~dpyv~v~~~~~~~~~~kT~v~~~t~nP~wne~f~f~v~~~~~~~l~i~V~d~d~ 81 (126)
T 1rlw_A 2 SHKFTVVVLRATKVTKGAFGDMLDTPDPYVELFISTTPDSRKRTRHFNNDINPVWNETFEFILDPNQENVLEITLMDANY 81 (126)
T ss_dssp CEEEEEEEEEEESCCSCHHHHHHCCCCEEEEEECTTSTTCCEECCCCTTCSSCEEEEEEEEEECTTSCCEEEEEEEECCS
T ss_pred CcEEEEEEEeeeCCCCCCccccCCCCCCEEEEEEccCCCceEEccccCCCCCCcccceEEEEecCCCCCEEEEEEEECCC
Confidence 58899999999999984 6678999999999974 6789999999999999999999995 345679999999998
Q ss_pred CCCCceeEEEEEEcccC--CCcccEEEEccCCCceEEEEEEee
Q 011161 86 IWKSTVLGSVIVTVESE--GQTGAVWYTLDSPSGQVCLHIKTI 126 (492)
Q Consensus 86 ~~~dd~IG~~~i~l~~l--~~~~~~w~~L~~~~G~i~l~l~~~ 126 (492)
. ++++||++.+++.++ +.....|++|.+ .|.+.+++.+.
T Consensus 82 ~-~~~~iG~~~i~l~~l~~~~~~~~~~~L~~-~~~g~i~~~le 122 (126)
T 1rlw_A 82 V-MDETLGTATFTVSSMKVGEKKEVPFIFNQ-VTEMVLEMSLE 122 (126)
T ss_dssp S-CCEEEEEEEEEGGGSCTTCEEEEEEEETT-TEEEEEEEEEE
T ss_pred C-CCceeEEEEEEHHHccCCCcEEEEEEcCC-CceEEEEEEEE
Confidence 7 488999999999998 455678999986 55555555554
No 10
>3pyc_A E3 ubiquitin-protein ligase smurf1; phospholipid binding, membrane associate, lipid binding PROT; 1.96A {Homo sapiens} PDB: 2jqz_A
Probab=99.76 E-value=1.4e-17 Score=144.90 Aligned_cols=112 Identities=24% Similarity=0.382 Sum_probs=96.1
Q ss_pred ceEEEEEEEEeecCCCCCCCCCCCcEEEEEECC--eeeeeeccCCCCCCeeccEEEEEeeCCCcEEEEEEEEcCCCCC--
Q 011161 13 AYLIKLELLAAKNLIGANLNGTSDPYAIITCGS--EKRFSSMVPGSRYPMWGEEFNFSVDELPVQIIVTIYDWDIIWK-- 88 (492)
Q Consensus 13 ~~~L~V~Vi~a~~L~~~d~~g~sDPyv~v~~~~--~~~~T~~~~~t~nP~W~e~f~f~i~~~~~~L~i~v~d~d~~~~-- 88 (492)
...|.|+|++|++|+++|..|.+||||++.++. ...+|+++++++||.|||+|.|.+... ..|.|+|||++..++
T Consensus 4 ~~~L~V~v~~a~~L~~~d~~g~sDpyv~v~~~~~~~~~kT~v~~~t~nP~wne~f~f~v~~~-~~l~~~v~d~d~~~~~~ 82 (132)
T 3pyc_A 4 FIKIRLTVLCAKNLAKKDFFRLPDPFAKIVVDGSGQCHSTDTVKNTLDPKWNQHYDLYVGKT-DSITISVWNHKKIHKKQ 82 (132)
T ss_dssp EEEEEEEEEEEESCCCCSTTCCCCEEEEEEETTTCCEEECCCCSSCSSCEEEEEEEEEEETT-CCEEEEEEEGGGTTSST
T ss_pred eEEEEEEEEEeECCCCCCCCCCcCeEEEEEECCCCceEECCccCCCCCCCccCEEEEEeCCC-CEEEEEEEECCCCCCCC
Confidence 467999999999999999999999999999864 678999999999999999999999764 349999999998876
Q ss_pred -CceeEEEEEEcccC---CCcccEEEEccCC--------CceEEEEEEe
Q 011161 89 -STVLGSVIVTVESE---GQTGAVWYTLDSP--------SGQVCLHIKT 125 (492)
Q Consensus 89 -dd~IG~~~i~l~~l---~~~~~~w~~L~~~--------~G~i~l~l~~ 125 (492)
++|||++.+++..+ ......|++|..+ .|+|.+++..
T Consensus 83 ~d~~lG~~~i~l~~l~~~~~~~~~~~~L~~~~~~~~~~~~G~i~v~l~~ 131 (132)
T 3pyc_A 83 GAGFLGCVRLLSNAISRLKDTGYQRLDLCKLNPSDTDAVRGQIVVSLQT 131 (132)
T ss_dssp TTTEEEEEEECHHHHHHHTTSCCEEEECBCSSTTCCCCCCSEEEEEEEE
T ss_pred CCCceEEEEEeHHHhhcccccCcEEEeeeecCCCCCCceeEEEEEEEEc
Confidence 79999999998877 4445789999763 4777777643
No 11
>2b3r_A Phosphatidylinositol-4-phosphate 3-kinase C2 DOMA containing alpha polypeptide; C2 domain, lipid binding, PI3-kinase, transferase; 2.30A {Mus musculus}
Probab=99.72 E-value=5.1e-17 Score=141.92 Aligned_cols=102 Identities=15% Similarity=0.312 Sum_probs=89.6
Q ss_pred CceEEEEEEEEeecCCCCCCCCCCCcEEEEEE-----CCeeeeeeccCCCCCCeeccEEEEE-eeC---CCcEEEEEEEE
Q 011161 12 SAYLIKLELLAAKNLIGANLNGTSDPYAIITC-----GSEKRFSSMVPGSRYPMWGEEFNFS-VDE---LPVQIIVTIYD 82 (492)
Q Consensus 12 ~~~~L~V~Vi~a~~L~~~d~~g~sDPyv~v~~-----~~~~~~T~~~~~t~nP~W~e~f~f~-i~~---~~~~L~i~v~d 82 (492)
..+.|.|+|++|++|+. +..+.+||||++++ ...+.+|+++++++||.|||+|.|. +.. ....|.|+|||
T Consensus 18 ~~~~L~V~V~~a~~L~~-~~~g~~DPyv~v~l~~~~~~~~~~kT~v~~~t~nP~wnE~f~f~~v~~~~l~~~~L~~~V~d 96 (134)
T 2b3r_A 18 RNGTLFIMVMHIKDLVT-EDGADPNPYVKTYLLPDTHKTSKRKTKISRKTRNPTFNEMLVYSGYSKETLRQRELQLSVLS 96 (134)
T ss_dssp ETTEEEEEEEEEECCCC-TTSCCCCEEEEEEEESCSSSCCCEECCCCCSCSSCEEEEEEEEESCCHHHHTTCEEEEEEEE
T ss_pred cCCEEEEEEEEeeCCCC-CCCCCCCeEEEEEEEcCCCCCceecCCcCcCCCCCCCccEEEECCcCHHHhCcCEEEEEEEE
Confidence 35789999999999987 77899999999998 3456799999999999999999999 642 34689999999
Q ss_pred cCCCCCCceeEEEEEEcccC--CCcccEEEEccC
Q 011161 83 WDIIWKSTVLGSVIVTVESE--GQTGAVWYTLDS 114 (492)
Q Consensus 83 ~d~~~~dd~IG~~~i~l~~l--~~~~~~w~~L~~ 114 (492)
++.++++++||++.+++.++ +.....||+|.+
T Consensus 97 ~d~~~~~~~lG~~~i~l~~l~~~~~~~~W~~L~~ 130 (134)
T 2b3r_A 97 AESLRENFFLGGITLPLKDFNLSKETVKWYQLTA 130 (134)
T ss_dssp CCSSSCCEEEEEEEEEGGGSCTTSCEEEEEECBC
T ss_pred CCCCCCCcEEEEEEEEhhhccCCCCcceeEECCC
Confidence 99999999999999999998 456679999986
No 12
>2nq3_A Itchy homolog E3 ubiquitin protein ligase; C2 domain, UBL conjugation pathway, structural genomics consortium, SGC; 1.80A {Homo sapiens} SCOP: b.7.1.1
Probab=99.72 E-value=6.5e-17 Score=147.59 Aligned_cols=117 Identities=12% Similarity=0.220 Sum_probs=97.9
Q ss_pred CCceEEEEEEEEeecCCCCCCCCCCCcEEEEEECCeeeeeeccCCCCCCeeccEEEEEeeCCCcEEEEEEEEcCCCCCCc
Q 011161 11 NSAYLIKLELLAAKNLIGANLNGTSDPYAIITCGSEKRFSSMVPGSRYPMWGEEFNFSVDELPVQIIVTIYDWDIIWKST 90 (492)
Q Consensus 11 ~~~~~L~V~Vi~a~~L~~~d~~g~sDPyv~v~~~~~~~~T~~~~~t~nP~W~e~f~f~i~~~~~~L~i~v~d~d~~~~dd 90 (492)
...+.|.|+|++|++|+..+..+.+||||++.+++...+|+++++++||.|||+|.|.+.. ...|.|+|||+|.+++++
T Consensus 33 ~~~~~L~V~V~~A~~L~~~~~~~~sDPYv~v~~~~~~~kT~v~~~tlnP~Wne~f~f~v~~-~~~L~~~V~D~d~~~~dd 111 (173)
T 2nq3_A 33 TMKSQLQITVISAKLKENKKNWFGPSPYVEVTVDGQSKKTEKCNNTNSPKWKQPLTVIVTP-VSKLHFRVWSHQTLKSDV 111 (173)
T ss_dssp SCCEEEEEEEEEEEECCCC--CCCCCEEEEEEETTEEEECCCCSSCSSCEEEEEEEEEECT-TCEEEEEEEECCSSSCCE
T ss_pred CCceEEEEEEEEeECCCCcccCCCCCeEEEEEECCEEeEccccCCCCCCeECCEEEEEeCC-CCEEEEEEEECCCCCCCc
Confidence 4578899999999999944445559999999999988999999999999999999999854 778999999999999999
Q ss_pred eeEEEEEEcccCC---C----cccEEEEccCC------CceEEEEEEeeeC
Q 011161 91 VLGSVIVTVESEG---Q----TGAVWYTLDSP------SGQVCLHIKTIKL 128 (492)
Q Consensus 91 ~IG~~~i~l~~l~---~----~~~~w~~L~~~------~G~i~l~l~~~~~ 128 (492)
+||++.+++.++. . ....|++|..+ .|+|.+.+.+...
T Consensus 112 ~lG~~~i~l~~l~~~~~~~~~~~~~~~~L~~~~~~~~~~G~L~v~l~~l~~ 162 (173)
T 2nq3_A 112 LLGTAALDIYETLKSNNMKLEEVVVTLQLGGDKEPTETIGDLSICLDGLQL 162 (173)
T ss_dssp EEEEEEEEHHHHHHHTTTEESSEEEEEEEEESSCTTSEEEEEEEEEESEEC
T ss_pred eEEEEEEEHHHhcccCCCCcceeEEEEECccCCCCCcccEEEEEEEeeeec
Confidence 9999999999871 1 12579999763 3778888777654
No 13
>2z0u_A WW domain-containing protein 1; C2 domain, alternative splicing, coiled coil, cytoplasm, phosphorylation, polymorphism, lipid binding protein; 2.20A {Homo sapiens}
Probab=99.72 E-value=1.7e-17 Score=148.76 Aligned_cols=103 Identities=15% Similarity=0.131 Sum_probs=90.6
Q ss_pred CceEEEEEEEEeecCCCCCCCCCCCcEEEEEECC---e---eeeeeccCCCCCCeeccEEEEEeeCC---CcEEEEEEEE
Q 011161 12 SAYLIKLELLAAKNLIGANLNGTSDPYAIITCGS---E---KRFSSMVPGSRYPMWGEEFNFSVDEL---PVQIIVTIYD 82 (492)
Q Consensus 12 ~~~~L~V~Vi~a~~L~~~d~~g~sDPyv~v~~~~---~---~~~T~~~~~t~nP~W~e~f~f~i~~~---~~~L~i~v~d 82 (492)
..+.|.|.|++|+||+++|..|.+||||++++.. . +++|+++++++||+|||+|.|.+... ...|.|+|||
T Consensus 41 ~~~~L~V~Vi~a~~L~~~d~~g~sDPyVkv~l~~~~~~~~~~~kT~v~~~tlnP~wnE~F~f~v~~~~l~~~~L~~~V~d 120 (155)
T 2z0u_A 41 KNKQFAILIIQLSNLSALLQQQDQKVNIRVAVLPCSESTTCLFRTRPLDASDTLVFNEVFWVSMSYPALHQKTLRVDVCT 120 (155)
T ss_dssp TTTEEEEEEEEEECGGGTCCSCCSEEEEEEEEESCSCHHHHEEECCCEECCSSEEEEEEEEEECCHHHHHHCEEEEEEEE
T ss_pred CCCEEEEEEEEccCcCCcccCCCCCEEEEEEEecCCCCCccceeCCcCCCCCCCccccEEEEEcCHHHhCcCEEEEEEEE
Confidence 4578999999999999999999999999999854 2 67999999999999999999998532 4579999999
Q ss_pred cCCCCCCceeEEEEEEcccC---CCcccEEEEccC
Q 011161 83 WDIIWKSTVLGSVIVTVESE---GQTGAVWYTLDS 114 (492)
Q Consensus 83 ~d~~~~dd~IG~~~i~l~~l---~~~~~~w~~L~~ 114 (492)
+|..+++++||++.+++.++ +.....||+|.+
T Consensus 121 ~d~~~~~d~iG~~~i~l~~l~~~~~~~~~W~~L~~ 155 (155)
T 2z0u_A 121 TDRSHLEECLGGAQISLAEVCRSGERSTRWYNLLS 155 (155)
T ss_dssp ECTTSCEEEEEEEEEECTTSCTTCCCEEEEEEEBC
T ss_pred CCCCCCCcEEEEEEEEHHHccCCCCccccceEccC
Confidence 99999999999999999998 356679999863
No 14
>3f04_A Synaptotagmin-1; C2A, calcium, cell junction, cytoplasmic vesicle, glycoprotein, lipoprotein, membrane, metal- binding, palmitate, phosphoprotein; 1.35A {Homo sapiens} SCOP: b.7.1.2 PDB: 3f01_A 3f05_A 3f00_A 1byn_A 2k45_A 2k4a_A 2k8m_A 2ki6_A*
Probab=99.71 E-value=3.9e-17 Score=144.08 Aligned_cols=103 Identities=23% Similarity=0.427 Sum_probs=91.6
Q ss_pred CceEEEEEEEEeecCCCCCCCCCCCcEEEEEE---CCeeeeeeccCCCCCCeeccEEEEEeeC---CCcEEEEEEEEcCC
Q 011161 12 SAYLIKLELLAAKNLIGANLNGTSDPYAIITC---GSEKRFSSMVPGSRYPMWGEEFNFSVDE---LPVQIIVTIYDWDI 85 (492)
Q Consensus 12 ~~~~L~V~Vi~a~~L~~~d~~g~sDPyv~v~~---~~~~~~T~~~~~t~nP~W~e~f~f~i~~---~~~~L~i~v~d~d~ 85 (492)
..+.|.|+|++|++|+.++..+.+||||++++ +....+|+++++++||.|||+|.|.+.. ....|.|+|||++.
T Consensus 32 ~~~~L~v~v~~a~~L~~~d~~g~~dpyv~v~l~~~~~~~~kT~v~~~t~nP~wne~f~f~v~~~~l~~~~L~i~V~d~d~ 111 (143)
T 3f04_A 32 QNNQLLVGIIQAAELPALDMGGTSDPYVKVFLLPDKKKKFETKVHRKTLNPVFNEQFTFKVPYSELGGKTLVMAVYDFDR 111 (143)
T ss_dssp TTTEEEEEEEEEECCCCBGGGBCCCEEEEEEEESCCSCCEECCCCCSCSSCEEEEEEEECCCHHHHTTCEEEEEEEECCS
T ss_pred CCCEEEEEEEEecCCCCCCCCCCcCcEEEEEEECCCCccEECccCcCCCCCcCcCeEEEeecHhhcCCCEEEEEEEeCCC
Confidence 56789999999999999998999999999998 4557899999999999999999998853 23679999999999
Q ss_pred CCCCceeEEEEEEcccC--CCcccEEEEccC
Q 011161 86 IWKSTVLGSVIVTVESE--GQTGAVWYTLDS 114 (492)
Q Consensus 86 ~~~dd~IG~~~i~l~~l--~~~~~~w~~L~~ 114 (492)
++++++||++.++|.++ +...+.|++|.+
T Consensus 112 ~~~~~~iG~~~i~l~~l~~~~~~~~W~~L~~ 142 (143)
T 3f04_A 112 FSKHDIIGEFKVPMNTVDFGHVTEEWRDLQS 142 (143)
T ss_dssp SSCCEEEEEEEEEGGGCCTTSCEEEEEECBC
T ss_pred CCCCceEEEEEEEHHHccCCCCcceEEECcC
Confidence 99999999999999998 445779999975
No 15
>1rsy_A Synaptotagmin I; calcium/phospholipid binding protein; 1.90A {Rattus norvegicus} SCOP: b.7.1.2
Probab=99.71 E-value=8e-17 Score=143.70 Aligned_cols=103 Identities=23% Similarity=0.427 Sum_probs=91.5
Q ss_pred CceEEEEEEEEeecCCCCCCCCCCCcEEEEEE---CCeeeeeeccCCCCCCeeccEEEEEeeC---CCcEEEEEEEEcCC
Q 011161 12 SAYLIKLELLAAKNLIGANLNGTSDPYAIITC---GSEKRFSSMVPGSRYPMWGEEFNFSVDE---LPVQIIVTIYDWDI 85 (492)
Q Consensus 12 ~~~~L~V~Vi~a~~L~~~d~~g~sDPyv~v~~---~~~~~~T~~~~~t~nP~W~e~f~f~i~~---~~~~L~i~v~d~d~ 85 (492)
..+.|.|+|++|++|+.++..+.+||||++++ +....+|+++++++||.|||+|.|.+.. ....|.|+|||++.
T Consensus 40 ~~~~L~V~v~~a~~L~~~d~~g~~dpyv~v~~~~~~~~~~kT~v~~~t~nP~wne~f~f~v~~~~l~~~~L~i~V~d~d~ 119 (152)
T 1rsy_A 40 QNNQLLVGIIQAAELPALDMGGTSDPYVKVFLLPDKKKKFETKVHRKTLNPVFNEQFTFKVPYSELGGKTLVMAVYDFDR 119 (152)
T ss_dssp TTTEEEEEEEEEESCCCCSTTSCCCEEEEEEEETTCCSCEECCCCTTCSSCEEEEEEEECCCHHHHTTCEEEEEEEECCS
T ss_pred CCCEEEEEEEEeECCCCccCCCCcCeEEEEEEEcCCCceEeccccCCCCCCcCcccEEEeecHHHcCCCEEEEEEEECCC
Confidence 45789999999999999999999999999998 3456799999999999999999998753 25679999999999
Q ss_pred CCCCceeEEEEEEcccC--CCcccEEEEccC
Q 011161 86 IWKSTVLGSVIVTVESE--GQTGAVWYTLDS 114 (492)
Q Consensus 86 ~~~dd~IG~~~i~l~~l--~~~~~~w~~L~~ 114 (492)
++++++||++.+++.++ +...+.|++|.+
T Consensus 120 ~~~~~~iG~~~i~l~~l~~~~~~~~W~~L~~ 150 (152)
T 1rsy_A 120 FSKHDIIGEFKVPMNTVDFGHVTEEWRDLQS 150 (152)
T ss_dssp SSCCEEEEEEEEEGGGCCCSSCEEEEEECBC
T ss_pred CCCCcEEEEEEEEchhccCCCCcceEEECCC
Confidence 99999999999999998 455689999975
No 16
>2bwq_A Regulating synaptic membrane exocytosis protein 2; C2 domain, neurotransmitter release, transport protein; 1.41A {Rattus norvegicus} SCOP: b.7.1.2
Probab=99.70 E-value=6.7e-17 Score=139.82 Aligned_cols=102 Identities=23% Similarity=0.396 Sum_probs=84.6
Q ss_pred CceEEEEEEEEeecCCCCCCCCCCCcEEEEEE-----CCeeeeeeccCCCCCCeeccEEEEEeeC----CCcEEEEEEEE
Q 011161 12 SAYLIKLELLAAKNLIGANLNGTSDPYAIITC-----GSEKRFSSMVPGSRYPMWGEEFNFSVDE----LPVQIIVTIYD 82 (492)
Q Consensus 12 ~~~~L~V~Vi~a~~L~~~d~~g~sDPyv~v~~-----~~~~~~T~~~~~t~nP~W~e~f~f~i~~----~~~~L~i~v~d 82 (492)
..+.|.|+|++|++|+.++..+.+||||++.+ +....+|+++++++||.|||+|.|.+.. ....|.|+|||
T Consensus 16 ~~~~L~v~v~~a~~L~~~d~~~~~dpyv~v~~~~~~~~~~~~kT~v~~~t~nP~wne~f~f~~~~~~~~~~~~l~~~V~d 95 (129)
T 2bwq_A 16 VGHQLIVTILGAKDLPSREDGRPRNPYVKIYFLPDRSDKNKRRTKTVKKTLEPKWNQTFIYSPVHRREFRERMLEITLWD 95 (129)
T ss_dssp TTTEEEEEEEEEESCCCCTTSCCBCEEEEEEEESSCSGGGEEECCCCSSBSSCEEEEEEEECSCCGGGGGGCEEEEEEEE
T ss_pred CCCEEEEEEEEeeCCCCCCCCCCCCCEEEEEEecCCCCCcceecccccCCCCCccccEEEEccCCHHHhcCCeEEEEEEE
Confidence 45889999999999999999999999999998 3567799999999999999999998521 24579999999
Q ss_pred cCCCCC--CceeEEEEEEcccC-CCcccEEEEcc
Q 011161 83 WDIIWK--STVLGSVIVTVESE-GQTGAVWYTLD 113 (492)
Q Consensus 83 ~d~~~~--dd~IG~~~i~l~~l-~~~~~~w~~L~ 113 (492)
++..++ +++||++.+++.++ ....+.||+|+
T Consensus 96 ~d~~~~~~~~~lG~~~i~l~~l~~~~~~~W~~Lq 129 (129)
T 2bwq_A 96 QARVREEESEFLGEILIELETALLDDEPHWYKLQ 129 (129)
T ss_dssp C-------CEEEEEEEEEGGGCCCSSCEEEEECC
T ss_pred CCcCcCcCCceeEEEEEEccccCCCcCCccEECc
Confidence 999887 99999999999998 34478999984
No 17
>3fdw_A Synaptotagmin-like protein 4; structural genomics, phospholipid binding, alternative splicing, cell membrane, cytoplasmic vesicle, membrane; 2.20A {Homo sapiens}
Probab=99.70 E-value=3.2e-17 Score=145.57 Aligned_cols=104 Identities=15% Similarity=0.221 Sum_probs=91.1
Q ss_pred CceEEEEEEEEeecCCCCC-CCCCCCcEEEEEEC-----CeeeeeeccCCCCCCeeccEEEEEeeCC---CcEEEEEEEE
Q 011161 12 SAYLIKLELLAAKNLIGAN-LNGTSDPYAIITCG-----SEKRFSSMVPGSRYPMWGEEFNFSVDEL---PVQIIVTIYD 82 (492)
Q Consensus 12 ~~~~L~V~Vi~a~~L~~~d-~~g~sDPyv~v~~~-----~~~~~T~~~~~t~nP~W~e~f~f~i~~~---~~~L~i~v~d 82 (492)
..+.|.|+|++|++|+.++ ..+.+||||++.+. ..+.+|+++++++||.|||+|.|.+... ...|.|+|||
T Consensus 21 ~~~~L~V~v~~a~~L~~~d~~~~~~dpyv~v~l~~~~~~~~~~kT~v~~~t~nP~wne~f~f~v~~~~~~~~~L~~~V~d 100 (148)
T 3fdw_A 21 QTQSLVVHVKECHQLAYADEAKKRSNPYVKTYLLPDKSRQGKRKTSIKRDTVNPLYDETLRYEIPESLLAQRTLQFSVWH 100 (148)
T ss_dssp TTTEEEEEEEEEESCCCSBTTTTBCCEEEEEEEETCCSGGGEEECCCCSSCSSCEEEEEEEEECCSTTGGGCEEEEEEEE
T ss_pred CCCEEEEEEEEecCCCCcccCCCCCCeEEEEEEEcCCcccCccccccCCCCCCCcEeeEEEEEeChhHhCceEEEEEEEE
Confidence 4678999999999999888 68999999999985 2367899999999999999999998643 3469999999
Q ss_pred cCCCCCCceeEEEEEEcccC--CCcccEEEEccCC
Q 011161 83 WDIIWKSTVLGSVIVTVESE--GQTGAVWYTLDSP 115 (492)
Q Consensus 83 ~d~~~~dd~IG~~~i~l~~l--~~~~~~w~~L~~~ 115 (492)
+|.++++++||++.++|.++ +.....|++|.++
T Consensus 101 ~d~~~~~~~iG~~~i~l~~l~~~~~~~~W~~L~~~ 135 (148)
T 3fdw_A 101 HGRFGRNTFLGEAEIQMDSWKLDKKLDHCLPLHGK 135 (148)
T ss_dssp ECGGGCEEEEEEEEEEHHHHHHHCCSEEEEECBCC
T ss_pred CCCCcCCcEEEEEEEEcccccccCCccceEECcCc
Confidence 99999999999999999998 4456799999884
No 18
>3rdl_A Protein kinase C alpha type; protein kinase PKC, transferase; 1.50A {Rattus norvegicus} PDB: 3gpe_A 3rdj_A 3twy_A 1dsy_A* 4dnl_A* 2uzp_A*
Probab=99.70 E-value=7.3e-17 Score=141.01 Aligned_cols=103 Identities=27% Similarity=0.494 Sum_probs=91.7
Q ss_pred CceEEEEEEEEeecCCCCCCCCCCCcEEEEEE-----CCeeeeeeccCCCCCCeeccEEEEEeeC--CCcEEEEEEEEcC
Q 011161 12 SAYLIKLELLAAKNLIGANLNGTSDPYAIITC-----GSEKRFSSMVPGSRYPMWGEEFNFSVDE--LPVQIIVTIYDWD 84 (492)
Q Consensus 12 ~~~~L~V~Vi~a~~L~~~d~~g~sDPyv~v~~-----~~~~~~T~~~~~t~nP~W~e~f~f~i~~--~~~~L~i~v~d~d 84 (492)
..+.|.|+|++|++|+.++..+.+||||++.+ .....+|++++++.||.|||+|.|.+.. ....|.|+|||++
T Consensus 14 ~~~~L~v~v~~a~~L~~~d~~~~~dpyv~v~~~~~~~~~~~~kT~~~~~t~nP~wne~f~f~~~~~~~~~~l~i~v~d~d 93 (137)
T 3rdl_A 14 TDEKLHVTVRDAKNLIPMDPNGLSDPYVKLKLIPDPKNESKQKTKTIRSTLNPQWNESFTFKLKPSDKDRRLSVEIWDWD 93 (137)
T ss_dssp ETTEEEEEEEEEESCCCCSTTSCCCEEEEEEEECCTTCCCCEECCCCCSCSSCEEEEEEEEECCGGGGGCEEEEEEEECC
T ss_pred cCCEEEEEEEEeeCCCCCCCCCCCCeeEEEEEEcCCCCCeeecCceEcCCCCCCcccEEEEEcCchhcCCEEEEEEEECC
Confidence 35899999999999999999999999999998 4567899999999999999999999853 3357999999999
Q ss_pred CCCCCceeEEEEEEcccC-CCcccEEEEccC
Q 011161 85 IIWKSTVLGSVIVTVESE-GQTGAVWYTLDS 114 (492)
Q Consensus 85 ~~~~dd~IG~~~i~l~~l-~~~~~~w~~L~~ 114 (492)
..+++++||++.+++.++ ......||+|.+
T Consensus 94 ~~~~~~~iG~~~i~l~~l~~~~~~~W~~L~~ 124 (137)
T 3rdl_A 94 RTTRNDFMGSLSFGVSELMKMPASGWYKLLN 124 (137)
T ss_dssp SSSCCEEEEEEEEEHHHHHHSCEEEEEECBC
T ss_pred CCCCCceEEEEEEeHHHhccCccCceEECcC
Confidence 999999999999999998 334789999976
No 19
>1a25_A CALB, protein kinase C (beta); calcium++/phospholipid binding protein, calcium-binding protein; HET: PSE; 2.70A {Rattus norvegicus} SCOP: b.7.1.2
Probab=99.70 E-value=9.5e-17 Score=142.68 Aligned_cols=102 Identities=27% Similarity=0.471 Sum_probs=90.8
Q ss_pred ceEEEEEEEEeecCCCCCCCCCCCcEEEEEEC-----CeeeeeeccCCCCCCeeccEEEEEeeCC--CcEEEEEEEEcCC
Q 011161 13 AYLIKLELLAAKNLIGANLNGTSDPYAIITCG-----SEKRFSSMVPGSRYPMWGEEFNFSVDEL--PVQIIVTIYDWDI 85 (492)
Q Consensus 13 ~~~L~V~Vi~a~~L~~~d~~g~sDPyv~v~~~-----~~~~~T~~~~~t~nP~W~e~f~f~i~~~--~~~L~i~v~d~d~ 85 (492)
.+.|.|+|++|++|+.++..+.+||||++++. ....+|+++++++||.|||+|.|.+... ...|.|+|||++.
T Consensus 30 ~~~L~v~v~~a~~L~~~d~~g~~dpyv~v~~~~~~~~~~~~kT~v~~~t~nP~wne~f~f~v~~~~~~~~L~i~V~d~d~ 109 (149)
T 1a25_A 30 REVLIVVVRDAKNLVPMDPNGLSDPYVKLKLIPDPKSESKQKTKTIKCSLNPEWNETFRFQLKESDKDRRLSVEIWDWDL 109 (149)
T ss_dssp SSEEEEEEEEEESCCCCSTTSCCCEEEEEEEESCTTCSSCEECCCCSSCSSCEEEEEEEEECCSGGGGCEEEEEEEECCS
T ss_pred CCEEEEEEEEeeCCCCCCCCCCcCeEEEEEEECCCCCcceEecceeCCCCCCcCCcEEEEEeccccCCCEEEEEEEECCC
Confidence 46799999999999999999999999999985 4567999999999999999999998642 4579999999999
Q ss_pred CCCCceeEEEEEEcccC-CCcccEEEEccC
Q 011161 86 IWKSTVLGSVIVTVESE-GQTGAVWYTLDS 114 (492)
Q Consensus 86 ~~~dd~IG~~~i~l~~l-~~~~~~w~~L~~ 114 (492)
.+++++||++.+++.++ ....+.||+|.+
T Consensus 110 ~~~~~~iG~~~i~l~~l~~~~~~~W~~L~~ 139 (149)
T 1a25_A 110 TSRNDFMGSLSFGISELQKAGVDGWFKLLS 139 (149)
T ss_dssp SSCCEEEEEEEEEHHHHTTCCEEEEEECBC
T ss_pred CCCCCEEEEEEEEHHHhCcCccCCeEEccC
Confidence 99999999999999998 345678999976
No 20
>2d8k_A Synaptotagmin VII; exocytosis, calcium binding, lysosome, C2 domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.70 E-value=1.3e-16 Score=140.47 Aligned_cols=104 Identities=20% Similarity=0.363 Sum_probs=91.0
Q ss_pred CceEEEEEEEEeecCCCCCCCCCCCcEEEEEEC---CeeeeeeccCCCCCCeeccEEEEEeeC----CCcEEEEEEEEcC
Q 011161 12 SAYLIKLELLAAKNLIGANLNGTSDPYAIITCG---SEKRFSSMVPGSRYPMWGEEFNFSVDE----LPVQIIVTIYDWD 84 (492)
Q Consensus 12 ~~~~L~V~Vi~a~~L~~~d~~g~sDPyv~v~~~---~~~~~T~~~~~t~nP~W~e~f~f~i~~----~~~~L~i~v~d~d 84 (492)
..+.|.|+|++|++|+.++..+.+||||++++. ....+|+++++++||.|||+|.|.+.. ....|.|+|||++
T Consensus 24 ~~~~L~v~v~~a~~L~~~d~~g~~dpyv~v~~~~~~~~~~kT~v~~~t~nP~wne~f~f~~~~~~~~~~~~l~i~V~d~d 103 (141)
T 2d8k_A 24 QESTLTVKIMKAQELPAKDFSGTSDPFVKIYLLPDKKHKLETKVKRKNLNPHWNETFLFEGFPYEKVVQRILYLQVLDYD 103 (141)
T ss_dssp SSCCEEEEEEEEESCCCCSSSSCCCEEEEEEEESCCSSEEECCCCTTCSSCCCCEEEEECSCCHHHHTTSEEEEEEEECC
T ss_pred CCCEEEEEEEEeECCCCCCCCCCCCcEEEEEEECCCCccEeCceEcCCCCCccccEEEECccCHHHcccCEEEEEEEECC
Confidence 467899999999999999999999999999983 456799999999999999999998521 2467999999999
Q ss_pred CCCCCceeEEEEEEcccC--CCcccEEEEccCC
Q 011161 85 IIWKSTVLGSVIVTVESE--GQTGAVWYTLDSP 115 (492)
Q Consensus 85 ~~~~dd~IG~~~i~l~~l--~~~~~~w~~L~~~ 115 (492)
.++++++||++.+++.++ +...+.|++|.++
T Consensus 104 ~~~~~~~iG~~~i~l~~l~~~~~~~~W~~L~~~ 136 (141)
T 2d8k_A 104 RFSRNDPIGEVSIPLNKVDLTQMQTFWKDLKPS 136 (141)
T ss_dssp SSSSCEEEEEEEEETTTSCTTSCEEEEECCEEC
T ss_pred CCCCCcEEEEEEEEhhhhcCCCCccEEEECcCC
Confidence 999999999999999998 4456789999763
No 21
>1rh8_A Piccolo protein; beta-sandwich, metal binding protein; NMR {Rattus norvegicus} SCOP: b.7.1.2
Probab=99.69 E-value=3.7e-17 Score=143.96 Aligned_cols=104 Identities=25% Similarity=0.459 Sum_probs=90.5
Q ss_pred ceEEEEEEEEeecCCCCCCCCCCCcEEEEEECCe--------------eeeeeccCCCCCCeeccEEEEE-ee--C-CCc
Q 011161 13 AYLIKLELLAAKNLIGANLNGTSDPYAIITCGSE--------------KRFSSMVPGSRYPMWGEEFNFS-VD--E-LPV 74 (492)
Q Consensus 13 ~~~L~V~Vi~a~~L~~~d~~g~sDPyv~v~~~~~--------------~~~T~~~~~t~nP~W~e~f~f~-i~--~-~~~ 74 (492)
.+.|.|+|++|++|+.++..|.+||||++++... ..+|+++++++||.|||+|.|. +. + ...
T Consensus 17 ~~~L~V~v~~a~~L~~~d~~g~~Dpyv~v~~~~~~~~~~~~~~~~~~~~~kT~v~~~t~nP~wne~f~f~~v~~~~l~~~ 96 (142)
T 1rh8_A 17 LGNLIIHILQARNLVPRDNNGYSDPFVKVYLLPGRGQVMVVQNASAEYKRRTKYVQKSLNPEWNQTVIYKSISMEQLMKK 96 (142)
T ss_dssp TTEEEEEEEEEESCCCCSSSSCSCCEEEEEETTSSCCCEECCCCCHHHHTTTTTTHHHHSCEEEEEEEECSCCHHHHTTC
T ss_pred CCEEEEEEEEecCCCCCCCCCCCCceEEEEEecCCCcccccccccccceeeccccCCCCCCCCCCEEEECCcCHHHccCC
Confidence 4689999999999999999999999999999753 4689999999999999999997 53 2 356
Q ss_pred EEEEEEEEcCCCCCCceeEEEEEEcccC--CCcccEEEEccCCC
Q 011161 75 QIIVTIYDWDIIWKSTVLGSVIVTVESE--GQTGAVWYTLDSPS 116 (492)
Q Consensus 75 ~L~i~v~d~d~~~~dd~IG~~~i~l~~l--~~~~~~w~~L~~~~ 116 (492)
.|.|+|||+|.++++++||++.+++.++ ....+.||+|.++.
T Consensus 97 ~l~i~V~d~d~~~~~~~lG~~~i~l~~l~~~~~~~~W~~L~~~~ 140 (142)
T 1rh8_A 97 TLEVTVWDYDRFSSNDFLGEVLIDLSSTSHLDNTPRWYPLKEQT 140 (142)
T ss_dssp EEEEEEEEECSSSCEEEEEEEEEETTSCGGGTTCCEEEECBCCC
T ss_pred EEEEEEEECCCCCCCceEEEEEEeccccccCCCCCeEEECCccC
Confidence 7999999999999999999999999988 34568999998743
No 22
>3fbk_A RGS3, RGP3, regulator of G-protein signaling 3; all beta-sheet fold, structural genomics, PSI-2, protein structure initiative; 2.00A {Homo sapiens} SCOP: b.7.1.0
Probab=99.69 E-value=1.8e-16 Score=141.69 Aligned_cols=103 Identities=26% Similarity=0.421 Sum_probs=90.1
Q ss_pred CceEEEEEEEEeecCCCCCCCCCCCcEEEEEEC-----CeeeeeeccCCCCCCeeccEEEEEe--eCCCcEEEEEEEEcC
Q 011161 12 SAYLIKLELLAAKNLIGANLNGTSDPYAIITCG-----SEKRFSSMVPGSRYPMWGEEFNFSV--DELPVQIIVTIYDWD 84 (492)
Q Consensus 12 ~~~~L~V~Vi~a~~L~~~d~~g~sDPyv~v~~~-----~~~~~T~~~~~t~nP~W~e~f~f~i--~~~~~~L~i~v~d~d 84 (492)
..+.|.|+|++|++|+.++ .+.+||||++.+. ....+|+++++++||.|||+|.|.+ .+....|.|+|||++
T Consensus 25 ~~~~L~V~v~~a~~L~~~d-~g~~Dpyv~v~l~~~~~~~~~~kT~v~~~t~nP~wne~f~f~v~~~~~~~~L~i~V~d~d 103 (153)
T 3fbk_A 25 QDRVLLLHIIEGKGLISKQ-PGTCDPYVKISLIPEDSRLRHQKTQTVPDCRDPAFHEHFFFPVQEEDDQKRLLVTVWNRA 103 (153)
T ss_dssp SSSEEEEEEEEEESCCCCS-SSCCCEEEEEEEESCSCCTTCEECCCCTTCSSCEEEEEEEEECCGGGTTSEEEEEEEECC
T ss_pred CCCEEEEEEEEeeCCCCCC-CCCCCEEEEEEEEcCCCCccEEeccccCCCCCCccccEEEEecccHHhCCEEEEEEEeCC
Confidence 4678999999999999999 6999999999982 3467999999999999999999998 455567999999999
Q ss_pred CCCC-CceeEEEEEEcccCC---CcccEEEEccCC
Q 011161 85 IIWK-STVLGSVIVTVESEG---QTGAVWYTLDSP 115 (492)
Q Consensus 85 ~~~~-dd~IG~~~i~l~~l~---~~~~~w~~L~~~ 115 (492)
..++ +++||++.+++.++. .....||+|.++
T Consensus 104 ~~~~~d~~lG~~~i~l~~l~~~~~~~~~W~~L~~~ 138 (153)
T 3fbk_A 104 SQSRQSGLIGCMSFGVKSLLTPDKEISGWYYLLGE 138 (153)
T ss_dssp SSGGGCEEEEEEEEEHHHHTC--CCEEEEEECBCT
T ss_pred CCCCCCcEEEEEEEEHHHhcCCCCccccEEECCCh
Confidence 9877 899999999999883 556789999873
No 23
>2q3x_A Regulating synaptic membrane exocytosis protein 1; C2 domain dimer, neurotransmitter release, transport protein; HET: MSE; 1.73A {Rattus norvegicus}
Probab=99.68 E-value=1.1e-16 Score=145.83 Aligned_cols=103 Identities=17% Similarity=0.282 Sum_probs=90.3
Q ss_pred ceEEEEEEEEeecCCCCCC-CCCCCcEEEEEECC-----eeeeeeccCCCCCCeeccEEEEEeeCCCcEEEEEEE-EcCC
Q 011161 13 AYLIKLELLAAKNLIGANL-NGTSDPYAIITCGS-----EKRFSSMVPGSRYPMWGEEFNFSVDELPVQIIVTIY-DWDI 85 (492)
Q Consensus 13 ~~~L~V~Vi~a~~L~~~d~-~g~sDPyv~v~~~~-----~~~~T~~~~~t~nP~W~e~f~f~i~~~~~~L~i~v~-d~d~ 85 (492)
.+.|.|+|++|++|+.+|. .+.+||||++++.. ...+|+++++++||.|||+|.|.+......|.|+|| |+|.
T Consensus 29 ~~~L~V~v~~a~~L~~~d~~~g~~DPyv~v~l~~~~~~~~~~kT~v~~~t~nP~wne~f~f~v~~~~~~L~~~V~~d~d~ 108 (171)
T 2q3x_A 29 KGQLEVEVIRARSLTQKPGSKSTPAPYVKVYLLENGACIAKKKTRIARKTLDPLYQQSLVFDESPQGKVLQVIVWGDYGR 108 (171)
T ss_dssp TTEEEEEEEEEESCCCCC---CCCEEEEEEEEEETTEEEEEEECCCCCSCSSCEEEEEEECSSCCTTEEEEEEEEEECST
T ss_pred CCEEEEEEEEeeCCCCCCcCCCCCCceEEEEEECCCccccceeCccCCCCCCCCCCcEEEEEecCCCCEEEEEEEEcCCC
Confidence 5789999999999999995 79999999999743 267899999999999999999998665678999999 9999
Q ss_pred CCCCceeEEEEEEcccC--CCcccEEEEccCC
Q 011161 86 IWKSTVLGSVIVTVESE--GQTGAVWYTLDSP 115 (492)
Q Consensus 86 ~~~dd~IG~~~i~l~~l--~~~~~~w~~L~~~ 115 (492)
++++++||++.+++.++ +.....||+|.++
T Consensus 109 ~~~d~~iG~~~i~l~~l~~~~~~~~W~~L~~~ 140 (171)
T 2q3x_A 109 MDHKCFMGVAQILLEELDLSSMVIGWYKLFPP 140 (171)
T ss_dssp TCSSEEEEEEEECGGGSCTTSCEEEEEECBCG
T ss_pred CCCCCEEEEEEEEHHHcccCCCcceeEECCCc
Confidence 99999999999999998 4567899999873
No 24
>1v27_A Regulating synaptic membrane exocytosis protein 2; RAB3-interacting molecule, riken structural genomics/proteomics initiative, RSGI; NMR {Homo sapiens} SCOP: b.7.1.2
Probab=99.68 E-value=1.3e-16 Score=140.08 Aligned_cols=103 Identities=22% Similarity=0.408 Sum_probs=90.0
Q ss_pred CceEEEEEEEEeecCCCCCCCCCCCcEEEEEE-----CCeeeeeeccCCCCCCeeccEEEEEe-eC---CCcEEEEEEEE
Q 011161 12 SAYLIKLELLAAKNLIGANLNGTSDPYAIITC-----GSEKRFSSMVPGSRYPMWGEEFNFSV-DE---LPVQIIVTIYD 82 (492)
Q Consensus 12 ~~~~L~V~Vi~a~~L~~~d~~g~sDPyv~v~~-----~~~~~~T~~~~~t~nP~W~e~f~f~i-~~---~~~~L~i~v~d 82 (492)
..+.|.|+|++|++|+.++..+.+||||++++ .....+|+++++++||.|||+|.|.+ .. ....|.|+|||
T Consensus 19 ~~~~L~v~v~~a~~L~~~d~~g~~dpyv~v~~~~~~~~~~~~kT~~~~~t~nP~wne~f~f~~~~~~~~~~~~l~i~V~d 98 (141)
T 1v27_A 19 VGHQLIVTILGAKDLPSREDGRPRNPYVKIYFLPDRSDKNKRRTKTVKKTLEPKWNQTFIYSPVHRREFRERMLEITLWD 98 (141)
T ss_dssp TTTEEEEEEEEEESCCCCSSSCCCCEEEECCCSSCCSSSSCCBCCCCSSCSSCCCCCCCEECSCCTTGGGTCEEEEEEEE
T ss_pred CCCEEEEEEEEccCCCCcCCCCCCCCEEEEEEecCCCCCcceeCccccCCCCCccccEEEEccCCHHHhcCCEEEEEEEE
Confidence 35789999999999999999999999999998 34567999999999999999999984 32 23679999999
Q ss_pred cCCCCC--CceeEEEEEEcccC-CCcccEEEEccC
Q 011161 83 WDIIWK--STVLGSVIVTVESE-GQTGAVWYTLDS 114 (492)
Q Consensus 83 ~d~~~~--dd~IG~~~i~l~~l-~~~~~~w~~L~~ 114 (492)
++..++ +++||++.+++.++ ......||+|.+
T Consensus 99 ~d~~~~~~~~~lG~~~i~l~~l~~~~~~~W~~L~~ 133 (141)
T 1v27_A 99 QARVREEESEFLGEILIELETALLDDEPHWYKLQT 133 (141)
T ss_dssp BCSSSSCCBCCCEEEEEEGGGCCCSSEEEEEECBC
T ss_pred CCCCcCCCCceEEEEEEEccccCCCCCCceEECcc
Confidence 999887 99999999999997 444689999987
No 25
>1wfm_A Synaptotagmin XIII; C2 domain, exocytosis, neurotransmitter release, riken structural genomics/proteomics initiative, RSGI, structural genomics; NMR {Homo sapiens} SCOP: b.7.1.2
Probab=99.67 E-value=4.2e-16 Score=136.77 Aligned_cols=100 Identities=16% Similarity=0.221 Sum_probs=86.9
Q ss_pred CceEEEEEEEEeecCCCCCCCCCCCcEEEEEEC---C-eeeeeeccCCCCCCeeccEEEEEeeCC---CcEEEEEEEEcC
Q 011161 12 SAYLIKLELLAAKNLIGANLNGTSDPYAIITCG---S-EKRFSSMVPGSRYPMWGEEFNFSVDEL---PVQIIVTIYDWD 84 (492)
Q Consensus 12 ~~~~L~V~Vi~a~~L~~~d~~g~sDPyv~v~~~---~-~~~~T~~~~~t~nP~W~e~f~f~i~~~---~~~L~i~v~d~d 84 (492)
..+.|.|+|++|+ ++|..|.+||||++++. + ...+|+++++++||.|||+|.|.+... ...|.|+|||+|
T Consensus 24 ~~~~L~V~v~~a~---~~d~~g~sDPyv~v~l~~~~~~~~~kT~v~~~tlnP~wnE~f~f~v~~~~l~~~~L~~~V~d~d 100 (138)
T 1wfm_A 24 QKAELFVTRLEAV---TSNHDGGCDCYVQGSVANRTGSVEAQTALKKRQLHTTWEEGLVLPLAEEELPTATLTLTLRTCD 100 (138)
T ss_dssp TTTEEEEEEEEEE---CCCCSSCCCEEEEEEEEETTEEEEEECCCCCCCSSEECSSCEEEECCTTSSTTCEEEEEEEECC
T ss_pred CCCEEEEEEEEEE---cCCCCCCcceEEEEEEEcCCCcccEecccCcCCCCCcCCceEEEEecHHHcCCCEEEEEEEECC
Confidence 4578999999999 46778999999999983 2 246899999999999999999998542 457999999999
Q ss_pred CCCCCceeEEEEEEcccC--CCcccEEEEccC
Q 011161 85 IIWKSTVLGSVIVTVESE--GQTGAVWYTLDS 114 (492)
Q Consensus 85 ~~~~dd~IG~~~i~l~~l--~~~~~~w~~L~~ 114 (492)
.++++++||++.++|.++ +.....|++|.+
T Consensus 101 ~~~~dd~lG~~~i~l~~l~~~~~~~~W~~L~~ 132 (138)
T 1wfm_A 101 RFSRHSVAGELRLGLDGTSVPLGAAQWGELKT 132 (138)
T ss_dssp SSCTTSCSEEEEEESSSSSSCTTCCEEEECCC
T ss_pred CCCCCcEEEEEEEEcccccCcccccceeeCcC
Confidence 999999999999999998 566789999986
No 26
>1ugk_A Synaptotagmin IV, KIAA1342; beta sandwich, structural genomics, riken structural genomics/proteomics initiative, RSGI, protein binding; NMR {Homo sapiens} SCOP: b.7.1.2
Probab=99.67 E-value=4e-16 Score=136.70 Aligned_cols=104 Identities=18% Similarity=0.235 Sum_probs=88.5
Q ss_pred CceEEEEEEEEeecCCCCCCC-CCCCcEEEEEEC---CeeeeeeccCCCCCCeeccEEEEE-eeC---CCcEEEEEEEEc
Q 011161 12 SAYLIKLELLAAKNLIGANLN-GTSDPYAIITCG---SEKRFSSMVPGSRYPMWGEEFNFS-VDE---LPVQIIVTIYDW 83 (492)
Q Consensus 12 ~~~~L~V~Vi~a~~L~~~d~~-g~sDPyv~v~~~---~~~~~T~~~~~t~nP~W~e~f~f~-i~~---~~~~L~i~v~d~ 83 (492)
..+.|.|+|++|++|+.++.. +.+||||++++. ....+|+++++++||.|||+|.|. +.. ....|.|+|||+
T Consensus 20 ~~~~L~v~v~~a~~L~~~d~~~~~~dpyv~v~~~~~~~~~~kT~v~~~t~nP~wne~f~f~~v~~~~~~~~~l~i~V~d~ 99 (138)
T 1ugk_A 20 ERKAFVVNIKEARGLPAMDEQSMTSDPYIKMTILPEKKHKVKTRVLRKTLDPAFDETFTFYGIPYTQIQELALHFTILSF 99 (138)
T ss_dssp GGTEEEEEEEEEESCCCCBTTTTBCEEEEEEEEETTTCSEEECCCCSSCSSCEEEEEEEEECCCSTTGGGCEEEEEEEEE
T ss_pred CCCEEEEEEEEeeCCCCCCCCCCCCCCEEEEEEecCCCceEecCcCcCCCCCcEeeEEEEcCcCHHHhccCEEEEEEEEC
Confidence 457899999999999999985 899999999984 367899999999999999999996 543 235799999999
Q ss_pred CCCCCCceeEEEEEEcccCC---CcccEEEEccCC
Q 011161 84 DIIWKSTVLGSVIVTVESEG---QTGAVWYTLDSP 115 (492)
Q Consensus 84 d~~~~dd~IG~~~i~l~~l~---~~~~~w~~L~~~ 115 (492)
|.++++++||++.++|.++. .....|++|.++
T Consensus 100 d~~~~~~~lG~~~i~l~~l~~~~~~~~~~~~l~~~ 134 (138)
T 1ugk_A 100 DRFSRDDIIGEVLIPLSGIELSEGKMLMNREIISG 134 (138)
T ss_dssp CSSCCCCCCEEEEEECTTCCCTTCCEEEEEECBSS
T ss_pred CCCCCCcEEEEEEEehhHccCCCCcchhhhhhhcC
Confidence 99999999999999999983 233567988763
No 27
>2chd_A Rabphilin-3A, exophilin-1; C2 domain, C2A, calcium binding, synaptic EXOC metal-binding, protein transport, synapse, transport, zinc-; 1.92A {Rattus norvegicus} PDB: 2k3h_A
Probab=99.67 E-value=3.4e-16 Score=137.82 Aligned_cols=103 Identities=18% Similarity=0.335 Sum_probs=89.0
Q ss_pred CceEEEEEEEEeecCCCCCCCCCCCcEEEEEECC-----eeeeeeccCCCCCCeeccEEEEE-eeC--C-CcEEEEEEEE
Q 011161 12 SAYLIKLELLAAKNLIGANLNGTSDPYAIITCGS-----EKRFSSMVPGSRYPMWGEEFNFS-VDE--L-PVQIIVTIYD 82 (492)
Q Consensus 12 ~~~~L~V~Vi~a~~L~~~d~~g~sDPyv~v~~~~-----~~~~T~~~~~t~nP~W~e~f~f~-i~~--~-~~~L~i~v~d 82 (492)
..+.|.|+|++|++|+.++..+.+||||++++.. ...+|+++++++||.|||+|.|. +.. . ...|.|+|||
T Consensus 27 ~~~~L~V~v~~a~~L~~~d~~g~~dpyv~v~~~~~~~~~~~~kT~v~~~t~nP~wne~f~f~~~~~~~~~~~~l~i~V~d 106 (142)
T 2chd_A 27 DNSNLQCTIIRAKGLKPMDSNGLADPYVKLHLLPGASKSNKLRTKTLRNTRNPVWNETLQYHGITEEDMQRKTLRISVCD 106 (142)
T ss_dssp GGTEEEEEEEEEESCCCCCTTSCCCEEEEEEEESCCSGGGEEECCCCCSCSSCEEEEEEEEESCCHHHHHHCEEEEEEEE
T ss_pred CCCEEEEEEEEecCCCCCCCCCCCCCEEEEEEEcCCCCcceeeCCcCCCCCCCcCcCEEEEcccCHHHccCCEEEEEEEE
Confidence 4678999999999999999999999999999864 57799999999999999999998 532 1 2579999999
Q ss_pred cCCCCCCceeEEEEEEcccC--CCcccEEEEccC
Q 011161 83 WDIIWKSTVLGSVIVTVESE--GQTGAVWYTLDS 114 (492)
Q Consensus 83 ~d~~~~dd~IG~~~i~l~~l--~~~~~~w~~L~~ 114 (492)
++..+++++||++.+++.++ +.....|++|..
T Consensus 107 ~d~~~~d~~iG~~~i~l~~l~~~~~~~~~~~L~~ 140 (142)
T 2chd_A 107 EDKFGHNEFIGETRFSLKKLKANQRKNFNICLER 140 (142)
T ss_dssp ECTTSCEEEEEEEEEEGGGCCTTCCEEEEEECBC
T ss_pred CCCCCCCcEEEEEEEEHHHcCCCCccEEEEeccc
Confidence 99999999999999999998 344566777764
No 28
>3n5a_A Synaptotagmin-7; calcium/phospholipid binding protein, protein transport; 1.44A {Mus musculus}
Probab=99.66 E-value=6e-16 Score=135.26 Aligned_cols=104 Identities=26% Similarity=0.402 Sum_probs=88.1
Q ss_pred CCceEEEEEEEEeecCCCCCCCCCCCcEEEEEECC-----eeeeeeccCCCCCCeeccEEEEEeeCCC---cEEEEEEEE
Q 011161 11 NSAYLIKLELLAAKNLIGANLNGTSDPYAIITCGS-----EKRFSSMVPGSRYPMWGEEFNFSVDELP---VQIIVTIYD 82 (492)
Q Consensus 11 ~~~~~L~V~Vi~a~~L~~~d~~g~sDPyv~v~~~~-----~~~~T~~~~~t~nP~W~e~f~f~i~~~~---~~L~i~v~d 82 (492)
...+.|.|+|++|++|+.++..|.+||||++++.. .+.+|++++++.||.|||+|.|.+.... ..|.|+|||
T Consensus 13 ~~~~~L~v~v~~a~~L~~~d~~g~~dpyv~v~~~~~~~~~~~~kT~~~~~t~nP~wne~f~f~v~~~~l~~~~l~~~V~d 92 (138)
T 3n5a_A 13 PSANSIIVNIIKARNLKAMDIGGTSDPYVKVWLMYKDKRVEKKKTVTKKRNLNPIFNESFAFDIPTEKLRETTIIITVMD 92 (138)
T ss_dssp TTTTEEEEEEEEEESCCCCBTTTBCCEEEEEEEEETTEEEEEEECCCCSSCSSCEEEEEEEEECCGGGGGGEEEEEEEEE
T ss_pred CCCCeEEEEEEEeeCCCCcCCCCCcCeEEEEEEEeCCCccceEeCccccCCCCCcCcceEEEECChhhcCceEEEEEEEE
Confidence 34689999999999999999999999999999853 3668999999999999999999985433 569999999
Q ss_pred cCCCCCCceeEEEEEEcccCCCcccEEEEccC
Q 011161 83 WDIIWKSTVLGSVIVTVESEGQTGAVWYTLDS 114 (492)
Q Consensus 83 ~d~~~~dd~IG~~~i~l~~l~~~~~~w~~L~~ 114 (492)
++..+++++||++.+++.++......|++|..
T Consensus 93 ~~~~~~~~~lG~~~i~l~~~~~~~~~W~~l~~ 124 (138)
T 3n5a_A 93 KDKLSRNDVIGKIYLSWKSGPGEVKHWKDMIA 124 (138)
T ss_dssp CCSSSCCEEEEEEEESSSSCHHHHHHHHHHHH
T ss_pred CCCCCCCcEEEEEEEccccCChHHHHHHHHHh
Confidence 99999999999999999977544455655543
No 29
>2dmg_A KIAA1228 protein; beta-sandwich, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=99.66 E-value=2.4e-16 Score=138.82 Aligned_cols=104 Identities=26% Similarity=0.383 Sum_probs=88.3
Q ss_pred CceEEEEEEEEeecCCCCCCCCCCCcEEEEEEC-----CeeeeeeccCCCCCCeeccEEEEEeeC---CCcEEEEEEEEc
Q 011161 12 SAYLIKLELLAAKNLIGANLNGTSDPYAIITCG-----SEKRFSSMVPGSRYPMWGEEFNFSVDE---LPVQIIVTIYDW 83 (492)
Q Consensus 12 ~~~~L~V~Vi~a~~L~~~d~~g~sDPyv~v~~~-----~~~~~T~~~~~t~nP~W~e~f~f~i~~---~~~~L~i~v~d~ 83 (492)
..+.|.|+|++|++|+.++..+ +||||++++. ..+.+|+++++++||.|||+|.|.+.. ....|.|+|||+
T Consensus 22 ~~~~L~v~v~~a~~L~~~d~~g-~dpyv~v~l~~~~~~~~~~kT~v~~~t~nP~wne~f~f~v~~~~l~~~~L~i~V~d~ 100 (142)
T 2dmg_A 22 QRNKLIVVVHACRNLIAFSEDG-SDPYVRMYLLPDKRRSGRRKTHVSKKTLNPVFDQSFDFSVSLPEVQRRTLDVAVKNS 100 (142)
T ss_dssp TTTEEEEEEEEEECCCCSSTTC-CCEEEEEEEESCCCSSSCEECCCCCSCSSCEEEEEEEECCCHHHHHHCEEEEEEEEC
T ss_pred CCCEEEEEEEEeECCCCCCCCC-CCeeEEEEEEcCCCCCCcccCCccCCCCCCCcCceEEEEecHHHhCcCEEEEEEEEC
Confidence 3578999999999999999888 9999999983 256799999999999999999998743 134799999999
Q ss_pred CCCCC--CceeEEEEEEcccC--CCcccEEEEccCCC
Q 011161 84 DIIWK--STVLGSVIVTVESE--GQTGAVWYTLDSPS 116 (492)
Q Consensus 84 d~~~~--dd~IG~~~i~l~~l--~~~~~~w~~L~~~~ 116 (492)
+.+++ +++||++.+++.++ ......|++|.++.
T Consensus 101 d~~~~~~~~~iG~~~i~l~~~~~~~~~~~W~~L~~~~ 137 (142)
T 2dmg_A 101 GGFLSKDKGLLGKVLVALASEELAKGWTQWYDLTEDS 137 (142)
T ss_dssp CCSSCCSCCCCEEEEEECCCSTTTTCBCCBCCCBCSC
T ss_pred CCccccCCcEEEEEEEecccccccccccceeeccCCC
Confidence 98764 57999999999987 44677899998743
No 30
>2cm5_A Rabphilin-3A; protein transport, zinc-finger, Ca2+ binding, metal-binding, synaptic exocytosis, C2A-C2B linker fragment, C2B, zinc, synapse; 1.28A {Rattus norvegicus} SCOP: b.7.1.2 PDB: 2cm6_A 3rpb_A
Probab=99.65 E-value=1.1e-16 Score=144.94 Aligned_cols=103 Identities=17% Similarity=0.335 Sum_probs=88.6
Q ss_pred CceEEEEEEEEeecCCCCCCCCCCCcEEEEEECC-----eeeeeeccCCCCCCeeccEEEEEeeCC---CcEEEEEEEEc
Q 011161 12 SAYLIKLELLAAKNLIGANLNGTSDPYAIITCGS-----EKRFSSMVPGSRYPMWGEEFNFSVDEL---PVQIIVTIYDW 83 (492)
Q Consensus 12 ~~~~L~V~Vi~a~~L~~~d~~g~sDPyv~v~~~~-----~~~~T~~~~~t~nP~W~e~f~f~i~~~---~~~L~i~v~d~ 83 (492)
..+.|.|+|++|++|+.++..|.+||||++++.. ...+|+++++++||.|||+|.|.+... ...|.|+|||+
T Consensus 35 ~~~~L~V~v~~a~~L~~~d~~g~~DPyv~v~l~~~~~~~~~~kT~v~~~t~nP~wne~f~f~v~~~~l~~~~L~i~V~d~ 114 (166)
T 2cm5_A 35 QQGGLIVGIIRCVHLAAMDANGYSDPFVKLWLKPDMGKKAKHKTQIKKKTLNPEFNEEFFYDIKHSDLAKKSLDISVWDY 114 (166)
T ss_dssp TTTEEEEEEEEEESCCCCSTTSCCCEEEEEEEETC---CCEEECCCCCSCSSCEEEEEEEEECCGGGGGGCEEEEEEEEC
T ss_pred CCCEEEEEEEEeECCCCccCCCCCCcEEEEEEECCCCccceEeCCcccCCCCCcccceEEEEcchHhcCCCEEEEEEEEC
Confidence 3578999999999999999999999999999864 567999999999999999999998542 45799999999
Q ss_pred CCCCCCceeEEEEEEcccCCCcccEEEEccC
Q 011161 84 DIIWKSTVLGSVIVTVESEGQTGAVWYTLDS 114 (492)
Q Consensus 84 d~~~~dd~IG~~~i~l~~l~~~~~~w~~L~~ 114 (492)
+.++++++||++.+++.+++.....|++|..
T Consensus 115 d~~~~~~~iG~~~i~l~~~~~~~~~W~~l~~ 145 (166)
T 2cm5_A 115 DIGKSNDYIGGCQLGISAKGERLKHWYECLK 145 (166)
T ss_dssp CSSSCCEEEEEEEEETTCCHHHHHHHHHHHH
T ss_pred CCCCCCcEEEeEEEecccCCchhHHHHHHHh
Confidence 9999999999999999987544555666543
No 31
>1tjx_A Similar to synaptotagmini/P65; C2B domain, calcium binding, endocytosis-EX complex; HET: GOL; 1.04A {Rattus norvegicus} SCOP: b.7.1.2 PDB: 1tjm_A* 1uov_A 1uow_A 1k5w_A 2lha_A*
Probab=99.65 E-value=1e-15 Score=137.44 Aligned_cols=103 Identities=33% Similarity=0.479 Sum_probs=88.0
Q ss_pred CceEEEEEEEEeecCCCCCCCCCCCcEEEEEECC-----eeeeeeccCCCCCCeeccEEEEEeeCC---CcEEEEEEEEc
Q 011161 12 SAYLIKLELLAAKNLIGANLNGTSDPYAIITCGS-----EKRFSSMVPGSRYPMWGEEFNFSVDEL---PVQIIVTIYDW 83 (492)
Q Consensus 12 ~~~~L~V~Vi~a~~L~~~d~~g~sDPyv~v~~~~-----~~~~T~~~~~t~nP~W~e~f~f~i~~~---~~~L~i~v~d~ 83 (492)
..+.|.|+|++|+||+.++..|.+||||++++.. ...+|+++++++||.|||+|.|.+... ...|.|+|||+
T Consensus 23 ~~~~L~V~v~~a~~L~~~d~~g~~dpyv~v~l~~~~~~~~~~kT~v~~~t~nP~wne~f~f~v~~~~l~~~~l~i~V~d~ 102 (159)
T 1tjx_A 23 TAGKLTVVILEAKNLKKMDVGGLSDPYVKIHLMQNGKRLKKKKTTIKKNTLNPYYNESFSFEVPFEQIQKVQVVVTVLDY 102 (159)
T ss_dssp TTTEEEEEEEEEESCCCCSTTSCCCEEEEEEEEETTEEEEEEECCCCCSCSSCEEEEEEEEECCGGGGGGCEEEEEEEEC
T ss_pred CCCEEEEEEEEeeCCCCccCCCCCCeEEEEEEEeCCceeceeeCceecCCCCCcccceEEEEcCHHHhCCcEEEEEEEEC
Confidence 4579999999999999999999999999999842 356899999999999999999998542 35699999999
Q ss_pred CCCCCCceeEEEEEEcccC--------------CCcccEEEEccC
Q 011161 84 DIIWKSTVLGSVIVTVESE--------------GQTGAVWYTLDS 114 (492)
Q Consensus 84 d~~~~dd~IG~~~i~l~~l--------------~~~~~~w~~L~~ 114 (492)
|.++++++||++.+++..+ +.....|++|.+
T Consensus 103 d~~~~~~~iG~~~i~l~~~~~~~~~w~~l~~~~~~~~~~W~~L~~ 147 (159)
T 1tjx_A 103 DKIGKNDAIGKVFVGYNSTGAELRHWSDMLANPRRPIAQWHTLQV 147 (159)
T ss_dssp CSSSCCEEEEEEEEETTCCHHHHHHHHHHHHSTTCCEEEEEECBC
T ss_pred CCCCCCceEEEEEECCCCCCcHHHHHHHHHHCCCCeeeeEEECcC
Confidence 9999999999999999854 234567888765
No 32
>2enp_A B/K protein; C2 type 1,beta sandwich, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=99.64 E-value=3.9e-16 Score=138.33 Aligned_cols=104 Identities=18% Similarity=0.321 Sum_probs=87.9
Q ss_pred CceEEEEEEEEeecCCCC-CC------CCCCCcEEEEEEC---CeeeeeeccCCCCCCeeccEEEEEeeC---CCcEEEE
Q 011161 12 SAYLIKLELLAAKNLIGA-NL------NGTSDPYAIITCG---SEKRFSSMVPGSRYPMWGEEFNFSVDE---LPVQIIV 78 (492)
Q Consensus 12 ~~~~L~V~Vi~a~~L~~~-d~------~g~sDPyv~v~~~---~~~~~T~~~~~t~nP~W~e~f~f~i~~---~~~~L~i 78 (492)
..+.|.|+|++|++|+.+ +. .+.+||||++++. ....+|+++++++||.|||+|.|.+.. ....|.|
T Consensus 24 ~~~~L~V~v~~a~~L~~~~d~~g~~~~~~~~dpyv~v~l~~~~~~~~kT~v~~~t~nP~wne~f~f~v~~~~l~~~~L~~ 103 (147)
T 2enp_A 24 LHNHLTVRVIEARDLPPPISHDGSRQDMAHSNPYVKICLLPDQKNSKQTGVKRKTQKPVFEERYTFEIPFLEAQRRTLLL 103 (147)
T ss_dssp TTTEEEEEEEEEECCCCSCSSCCSSCTTCCCCCEEEEEEETCCSSCEECCCCCSCSSCCCCBCCEECCCHHHHHHSEEEE
T ss_pred CCCEEEEEEEEEeCCCCccccccccccCCCCCcEEEEEEEeCCCcceEeecccCCCCCeEeeeEEEEeChHHhccCEEEE
Confidence 457899999999999984 43 3589999999985 356799999999999999999998753 1357999
Q ss_pred EEEEcCCCCCCceeEEEEEEcccC--CCcccEEEEccCC
Q 011161 79 TIYDWDIIWKSTVLGSVIVTVESE--GQTGAVWYTLDSP 115 (492)
Q Consensus 79 ~v~d~d~~~~dd~IG~~~i~l~~l--~~~~~~w~~L~~~ 115 (492)
+|||++.++++++||++.++|.++ ......|+.|.++
T Consensus 104 ~V~d~d~~~~~~~iG~~~i~l~~l~~~~~~~~w~~L~~~ 142 (147)
T 2enp_A 104 TVVDFDKFSRHCVIGKVSVPLCEVDLVKGGHWWKALIPS 142 (147)
T ss_dssp EEECCSTTCCSCCCEEEEEETTTSCTTTCCCEEECCBCC
T ss_pred EEEECCCCcCCcEEEEEEEechhcCCCCCccEEEEeecC
Confidence 999999999999999999999998 3445689999873
No 33
>1w15_A Synaptotagmin IV; metal binding protein, endocytosis/exocytosis neurotransmitter release, transmembrane; 1.93A {Rattus norvegicus} SCOP: b.7.1.2 PDB: 1w16_A
Probab=99.64 E-value=2.1e-16 Score=141.03 Aligned_cols=103 Identities=18% Similarity=0.370 Sum_probs=82.2
Q ss_pred CceEEEEEEEEeecCCCCCCCCCCCcEEEEEE--CCe---eeeeeccCCCCCCeeccEEEEEeeCC---CcEEEEEEEEc
Q 011161 12 SAYLIKLELLAAKNLIGANLNGTSDPYAIITC--GSE---KRFSSMVPGSRYPMWGEEFNFSVDEL---PVQIIVTIYDW 83 (492)
Q Consensus 12 ~~~~L~V~Vi~a~~L~~~d~~g~sDPyv~v~~--~~~---~~~T~~~~~t~nP~W~e~f~f~i~~~---~~~L~i~v~d~ 83 (492)
..+.|.|+|++|++|+.++..+.+||||++++ +.. +++|+++++++||.|||+|.|.+... ...|.|+|||+
T Consensus 28 ~~~~L~v~v~~a~~L~~~d~~g~~dpyv~v~~~~~~~~~~~~kT~v~~~t~nP~wne~f~f~v~~~~l~~~~l~v~V~d~ 107 (153)
T 1w15_A 28 TTNTLTVVVLKARHLPKSDVSGLSDPYVKVNLYHAKKRISKKKTHVKKCTPNAVFNELFVFDIPCESLEEISVEFLVLDS 107 (153)
T ss_dssp TTTEEEEEEEEEESCC------CCCEEEEEEEEETTEEEEEEECCCCCSCSSEEEEEEEEEECCSSSSTTEEEEEEEEEC
T ss_pred CCCEEEEEEEEeECCCCcCCCCCCCeEEEEEEEeCCeEeceEecCcccCCCCCeecceEEEECCHHHhCceEEEEEEEeC
Confidence 35789999999999999999999999999998 333 56899999999999999999998653 25699999999
Q ss_pred CCCCCCceeEEEEEEcccCCCcccEEEEccC
Q 011161 84 DIIWKSTVLGSVIVTVESEGQTGAVWYTLDS 114 (492)
Q Consensus 84 d~~~~dd~IG~~~i~l~~l~~~~~~w~~L~~ 114 (492)
+.++++++||++.+++.+.......|++|..
T Consensus 108 d~~~~~~~lG~~~i~l~~~~~~~~~W~~l~~ 138 (153)
T 1w15_A 108 ERGSRNEVIGRLVLGATAEGSGGGHWKEICD 138 (153)
T ss_dssp CTTSCCEEEEEEEESTTCCSHHHHHHHHHHH
T ss_pred CCCCCCcEEEEEEECCCCCchHHHHHHHHHh
Confidence 9999999999999999986555556666543
No 34
>2r83_A Synaptotagmin-1; C2A-C2B, exocytosis, calcium, cell junction, cytoplasmic vesicle, glycoprotein, lipoprotein, membrane, metal-binding palmitate; 2.70A {Homo sapiens} SCOP: b.7.1.2
Probab=99.64 E-value=4.5e-15 Score=145.90 Aligned_cols=116 Identities=22% Similarity=0.460 Sum_probs=99.5
Q ss_pred CceEEEEEEEEeecCCCCCCCCCCCcEEEEEEC---CeeeeeeccCCCCCCeeccEEEEEeeC---CCcEEEEEEEEcCC
Q 011161 12 SAYLIKLELLAAKNLIGANLNGTSDPYAIITCG---SEKRFSSMVPGSRYPMWGEEFNFSVDE---LPVQIIVTIYDWDI 85 (492)
Q Consensus 12 ~~~~L~V~Vi~a~~L~~~d~~g~sDPyv~v~~~---~~~~~T~~~~~t~nP~W~e~f~f~i~~---~~~~L~i~v~d~d~ 85 (492)
..+.|.|+|++|++|+.+|..+.+||||++.+. ....+|+++++++||.|||+|.|.+.. ....|.|+|||+|.
T Consensus 17 ~~~~L~v~v~~a~~L~~~d~~~~~dpyv~v~~~~~~~~~~~T~~~~~~~nP~wne~f~f~v~~~~~~~~~l~~~V~d~d~ 96 (284)
T 2r83_A 17 QNNQLLVGIIQAAELPALDMGGTSDPYVKVFLLPDKKKKFETKVHRKTLNPVFNEQFTFKVPYSELAGKTLVMAVYDFDR 96 (284)
T ss_dssp TTTEEEEEEEEEECCCCCSSSSSCCEEEEEEEETCTTSCEECCCCCSCSSCEEEEEEEECCCGGGCTTCEEEEEEEECCS
T ss_pred CCCEEEEEEEEeeCCCCCCCCCCCCeEEEEEEEcCCCceEeCCcccCCCCCeeCceEEEEechHHhCcCEEEEEEEECCC
Confidence 468999999999999999999999999999985 346789999999999999999999853 24679999999999
Q ss_pred CCCCceeEEEEEEcccC--CCcccEEEEccCC-------CceEEEEEEeee
Q 011161 86 IWKSTVLGSVIVTVESE--GQTGAVWYTLDSP-------SGQVCLHIKTIK 127 (492)
Q Consensus 86 ~~~dd~IG~~~i~l~~l--~~~~~~w~~L~~~-------~G~i~l~l~~~~ 127 (492)
++++++||++.+++.++ +.....|++|.+. .|++++.+.+.+
T Consensus 97 ~~~~~~lG~~~i~l~~l~~~~~~~~w~~L~~~~~~~~~~~G~i~l~l~~~p 147 (284)
T 2r83_A 97 FSKHDIIGEFKVPMNTVDFGHVTEEWRDLQSAEKEEQEKLGDICFSLRYVP 147 (284)
T ss_dssp SSCCCEEEEEEEEGGGCCCSSCEEEEEECBCCSSCCCCCCCEEEEEEEEET
T ss_pred CCCCceeEEEEEcchhcccCCcceeEEEeeccccccccccccEEEEEEecC
Confidence 99999999999999998 4556789999652 377877776653
No 35
>3jzy_A Intersectin 2; C2 domain, structural genomics consortium (SGC), endocytosis; 1.56A {Homo sapiens} PDB: 3qbv_B* 1ki1_B
Probab=99.59 E-value=1e-14 Score=155.21 Aligned_cols=117 Identities=22% Similarity=0.354 Sum_probs=102.0
Q ss_pred CCCceEEEEEEEEeecCCCCCCCCCCCcEEEEEECCeeeeeeccCCCCCCeeccEEEEEeeCCC-cEEEEEEEEcCCCCC
Q 011161 10 TNSAYLIKLELLAAKNLIGANLNGTSDPYAIITCGSEKRFSSMVPGSRYPMWGEEFNFSVDELP-VQIIVTIYDWDIIWK 88 (492)
Q Consensus 10 ~~~~~~L~V~Vi~a~~L~~~d~~g~sDPyv~v~~~~~~~~T~~~~~t~nP~W~e~f~f~i~~~~-~~L~i~v~d~d~~~~ 88 (492)
....+.|.|+|++|++|+++|..|.+||||++.+++...+|+++++++||.|+|+|.|.+..+. ..|.|+|||+|..++
T Consensus 383 ~~~~~~l~v~v~~a~~L~~~d~~~~sdpyv~v~~~~~~~~T~~~~~t~nP~w~e~f~f~~~~~~~~~l~~~v~d~d~~~~ 462 (510)
T 3jzy_A 383 TSGIGRLMVHVIEATELKACKPNGKSNPYCEISMGSQSYTTRTIQDTLNPKWNFNCQFFIKDLYQDVLCLTLFDRDQFSP 462 (510)
T ss_dssp ---CEEEEEEEEEEESCCCCSTTSCCCEEEEEEETTEEEECCCCSSCSSCEEEEEEEEEESCTTTCEEEEEEEECCSSSS
T ss_pred CCCCceEEEEeceeecCCCCCCCCCCCeEEEEEECCeeccCCccCCCCCCccCceEEEEecCCCCCEEEEEEEeCCCCCC
Confidence 3456899999999999999999999999999999999999999999999999999999996544 569999999999999
Q ss_pred CceeEEEEEEcccCC--C----cccEEEEccC-CCceEEEEEEee
Q 011161 89 STVLGSVIVTVESEG--Q----TGAVWYTLDS-PSGQVCLHIKTI 126 (492)
Q Consensus 89 dd~IG~~~i~l~~l~--~----~~~~w~~L~~-~~G~i~l~l~~~ 126 (492)
+++||++.+++.++. . ....|++|.. ..|++.+.+++.
T Consensus 463 ~d~lG~~~~~l~~l~~~~~~~~~~~~~~~l~~~~~G~i~l~~~l~ 507 (510)
T 3jzy_A 463 DDFLGRTEIPVAKIRTEQESKGPMTRRLLLHEVPTGEVWVRFDLQ 507 (510)
T ss_dssp CCEEEEEEEEHHHHHHHHHHHCSCCEEEECBSSSSCEEEEEEEEE
T ss_pred CCceEEEEEEHHHhccccCCCCceeeeecCCCCCCceEEEEEEEE
Confidence 999999999999882 1 2578999976 469998888765
No 36
>1dqv_A Synaptotagmin III; beta sandwich, calcium ION, C2 domain, endocytosis/exocytosis complex; 3.20A {Rattus rattus} SCOP: b.7.1.2 b.7.1.2 PDB: 3hn8_A
Probab=99.59 E-value=1.2e-14 Score=144.07 Aligned_cols=116 Identities=21% Similarity=0.360 Sum_probs=96.9
Q ss_pred CceEEEEEEEEeecCCCCCCCCCCCcEEEEEE---CCeeeeeeccCCCCCCeeccEEEEEeeCC---CcEEEEEEEEcCC
Q 011161 12 SAYLIKLELLAAKNLIGANLNGTSDPYAIITC---GSEKRFSSMVPGSRYPMWGEEFNFSVDEL---PVQIIVTIYDWDI 85 (492)
Q Consensus 12 ~~~~L~V~Vi~a~~L~~~d~~g~sDPyv~v~~---~~~~~~T~~~~~t~nP~W~e~f~f~i~~~---~~~L~i~v~d~d~ 85 (492)
..+.|.|+|++|++|+.+|..|.+||||++++ +....+|+++++++||.|+|+|.|.+... ...|.|+|||+|.
T Consensus 18 ~~~~L~v~v~~a~~L~~~d~~g~~dPyv~v~l~~~~~~~~kT~v~~~t~nP~wne~f~f~v~~~~l~~~~L~~~V~d~d~ 97 (296)
T 1dqv_A 18 GSDQLVVRILQALDLPAKDSNGFSDPYVKIYLLPDRKKKFQTKVHRKTLNPIFNETFQFSVPLAELAQRKLHFSVYDFDR 97 (296)
T ss_dssp SSCEEEEEEEEEECCCCCSTTSCCCEEEEEECTTSTTSCEECCCCCSCSSCEEEEEEEEECCGGGGSSCCCEEEEEECCS
T ss_pred CCCEEEEEEEEeECCCCcCCCCCcCeEEEEEEEcCCCeeEeCCccCCCCCCcEeeEEEEEecHHHhcCCEEEEEEEEcCC
Confidence 46899999999999999999999999999998 45678999999999999999999998532 3479999999999
Q ss_pred CCCCceeEEEEEE-cccC---CCcccEEEEccCC------CceEEEEEEeee
Q 011161 86 IWKSTVLGSVIVT-VESE---GQTGAVWYTLDSP------SGQVCLHIKTIK 127 (492)
Q Consensus 86 ~~~dd~IG~~~i~-l~~l---~~~~~~w~~L~~~------~G~i~l~l~~~~ 127 (492)
++++++||++.++ +.++ ......|++|... .|++.+.+.+.+
T Consensus 98 ~~~~~~iG~~~i~~l~~~~~~~~~~~~w~~L~~~~~~~~~~G~i~vsl~y~~ 149 (296)
T 1dqv_A 98 FSRHDLIGQVVLDNLLELAEQPPDRPLWRDILEGGSEKADLGELNFSLCYLP 149 (296)
T ss_dssp SSCCCEEEEEECCCTTGGGSSCSSCCCCEECBCCSSCCSCCCEEEEEEEEET
T ss_pred CCCCceEEEEEeccccccccCCccceeeeccccccccccccceEEEEEEecc
Confidence 9999999999995 4333 4455789999652 388888777654
No 37
>3nsj_A Perforin-1; pore forming protein, immune system; HET: NAG; 2.75A {Mus musculus}
Probab=99.58 E-value=1.5e-14 Score=153.60 Aligned_cols=110 Identities=20% Similarity=0.293 Sum_probs=96.2
Q ss_pred CceEEEEEEEEeecCCCCCCCCCCCcEEEEEECCeeeeeeccCCCCCCeeccEEEEEeeC--CCcEEEEEEEEcCCCCCC
Q 011161 12 SAYLIKLELLAAKNLIGANLNGTSDPYAIITCGSEKRFSSMVPGSRYPMWGEEFNFSVDE--LPVQIIVTIYDWDIIWKS 89 (492)
Q Consensus 12 ~~~~L~V~Vi~a~~L~~~d~~g~sDPyv~v~~~~~~~~T~~~~~t~nP~W~e~f~f~i~~--~~~~L~i~v~d~d~~~~d 89 (492)
..+.|.|+|++|++|+. |..|.+||||+|.+++...+|+++++++||.|||+|.|.+.. ....|.|+|||+|..++|
T Consensus 392 ~~~~L~V~V~~A~~L~~-D~~g~sDPYV~v~l~~~~~kTkvik~tlNP~Wne~f~f~~~~~~~~~~L~~~V~D~D~~~~d 470 (540)
T 3nsj_A 392 GLAHLVVSNFRAEHLWG-DYTTATDAYLKVFFGGQEFRTGVVWNNNNPRWTDKMDFENVLLSTGGPLRVQVWDADYGWDD 470 (540)
T ss_dssp TEEEEEEEEEEEESCCC-SSCSCCCEEEEEEETTEEEECCCBCSCSSCBCCCCEEEEEEETTTCCCEEEEEEECCSSSCC
T ss_pred cccEEEEEEEEccCCCc-ccCCCcCeEEEEEECCEeeeeeeecCCCCCCCCeEEEEEEecCCCCCEEEEEEEECCCCCCC
Confidence 35789999999999998 999999999999999988999999999999999999998642 467799999999999999
Q ss_pred ceeEEEEEEcccCCCcccEEEEccCCCceEEEEEEee
Q 011161 90 TVLGSVIVTVESEGQTGAVWYTLDSPSGQVCLHIKTI 126 (492)
Q Consensus 90 d~IG~~~i~l~~l~~~~~~w~~L~~~~G~i~l~l~~~ 126 (492)
||||.+.++|.. .....|+.|. +|.+++++++.
T Consensus 471 D~LG~~~~~L~~--g~~~~~~~l~--~G~l~~~~~~~ 503 (540)
T 3nsj_A 471 DLLGSCDRSPHS--GFHEVTCELN--HGRVKFSYHAK 503 (540)
T ss_dssp EEEEEEEECCCS--EEEEEEEECS--SSEEEEEEEEE
T ss_pred CEEEEEEEEeeC--CcEEEEEEcC--CeEEEEEEEEE
Confidence 999999999884 2346788875 68888887754
No 38
>2cjt_A UNC-13 homolog A, MUNC13-1; phorbol-ester binding, neurotransmitter release, RIM, MUNC13 domains, exocytosis, metal-binding; 1.44A {Rattus norvegicus} SCOP: b.7.1.1
Probab=99.55 E-value=2.6e-14 Score=124.24 Aligned_cols=84 Identities=17% Similarity=0.324 Sum_probs=72.5
Q ss_pred ceEEEEEEEEeecCCCCCCCCCCCcEEEEEECCeeeeeeccC-CCCCCeeccEEEEEeeCCCcEEEEEEEEcCCCCCCce
Q 011161 13 AYLIKLELLAAKNLIGANLNGTSDPYAIITCGSEKRFSSMVP-GSRYPMWGEEFNFSVDELPVQIIVTIYDWDIIWKSTV 91 (492)
Q Consensus 13 ~~~L~V~Vi~a~~L~~~d~~g~sDPyv~v~~~~~~~~T~~~~-~t~nP~W~e~f~f~i~~~~~~L~i~v~d~d~~~~dd~ 91 (492)
-+.|.|+|++|++|.. .|.+||||++. .+..+|+++. ++.||.|||+|.|.+......|.|+|||+| .++|++
T Consensus 4 ~~~L~V~V~~A~~l~~---~g~~DPYv~v~--~~~~kt~~~~~~t~nP~WnE~f~f~v~~~~~~L~~~V~D~d-~~~dd~ 77 (131)
T 2cjt_A 4 MSLLCVGVKKAKFDGA---QEKFNTYVTLK--VQNVKSTTIAVRGSQPSWEQDFMFEINRLDLGLTVEVWNKG-LIWDTM 77 (131)
T ss_dssp CEEEEEEEEEEECSSC---GGGCEEEEEEE--ETTEEEECCCEESSSCEEEEEEEEEECCCSSEEEEEEEECC-SSCEEE
T ss_pred ceEEEEEEEEeECCCC---CCCcCeEEEEE--ecCEEEeEecCCCCCceECCEEEEEEeCCCCeEEEEEEECC-CCCCCe
Confidence 4789999999998853 67899999999 3344565554 689999999999999876778999999999 889999
Q ss_pred eEEEEEEcccC
Q 011161 92 LGSVIVTVESE 102 (492)
Q Consensus 92 IG~~~i~l~~l 102 (492)
||++.++|.++
T Consensus 78 iG~~~i~l~~l 88 (131)
T 2cjt_A 78 VGTVWIPLRTI 88 (131)
T ss_dssp EEEEEEEGGGS
T ss_pred EEEEEEEHHHh
Confidence 99999999998
No 39
>2cjs_A UNC-13 homolog A, MUNC13-1; neurotransmitter transport, zinc finger, synapto phorbol-ester binding; 1.78A {Rattus norvegicus} SCOP: b.7.1.1
Probab=99.52 E-value=6.8e-14 Score=126.70 Aligned_cols=84 Identities=17% Similarity=0.313 Sum_probs=73.2
Q ss_pred ceEEEEEEEEeecCCCCCCCCCCCcEEEEEECCeeeeeeccC-CCCCCeeccEEEEEeeCCCcEEEEEEEEcCCCCCCce
Q 011161 13 AYLIKLELLAAKNLIGANLNGTSDPYAIITCGSEKRFSSMVP-GSRYPMWGEEFNFSVDELPVQIIVTIYDWDIIWKSTV 91 (492)
Q Consensus 13 ~~~L~V~Vi~a~~L~~~d~~g~sDPyv~v~~~~~~~~T~~~~-~t~nP~W~e~f~f~i~~~~~~L~i~v~d~d~~~~dd~ 91 (492)
.+.|.|+|++|++|. ..+.+||||++. .+..+|++++ ++.||.|||+|.|.+.+....|.|+|||+| .++|++
T Consensus 13 ~~~L~V~V~~A~~l~---~~g~~DPYV~v~--~~~~kt~~~~~~t~nP~WnE~f~f~v~~~~~~L~~~V~D~d-~~~dd~ 86 (167)
T 2cjs_A 13 LSLLCVGVKKAKFDG---AQEKFNTYVTLK--VQNVESTTIAVRGSQPSWEQDFMFEINRLDLGLTVEVWNKG-LIWDTM 86 (167)
T ss_dssp CCEEEEEEEEEECSS---CGGGCEEEEEEE--ETTEEEECCCEESSSCEEEEEEEEECCCTTSEEEEEEEECC-SSCCEE
T ss_pred eEEEEEEEEEEECCC---CCCCCCeEEEEE--ecceEEEEecCCCCCCCCCCEEEEEeeCCCCEEEEEEEECC-CCCCce
Confidence 469999999999884 368899999999 3345676665 589999999999999877778999999999 889999
Q ss_pred eEEEEEEcccC
Q 011161 92 LGSVIVTVESE 102 (492)
Q Consensus 92 IG~~~i~l~~l 102 (492)
||++.++|.++
T Consensus 87 iG~~~i~L~~l 97 (167)
T 2cjs_A 87 VGTVWIPLRTI 97 (167)
T ss_dssp EEEEEEEGGGS
T ss_pred EEEEEEEHHHh
Confidence 99999999998
No 40
>2r83_A Synaptotagmin-1; C2A-C2B, exocytosis, calcium, cell junction, cytoplasmic vesicle, glycoprotein, lipoprotein, membrane, metal-binding palmitate; 2.70A {Homo sapiens} SCOP: b.7.1.2
Probab=99.48 E-value=2.1e-13 Score=133.89 Aligned_cols=103 Identities=33% Similarity=0.480 Sum_probs=87.2
Q ss_pred CceEEEEEEEEeecCCCCCCCCCCCcEEEEEEC--C---eeeeeeccCCCCCCeeccEEEEEeeCC---CcEEEEEEEEc
Q 011161 12 SAYLIKLELLAAKNLIGANLNGTSDPYAIITCG--S---EKRFSSMVPGSRYPMWGEEFNFSVDEL---PVQIIVTIYDW 83 (492)
Q Consensus 12 ~~~~L~V~Vi~a~~L~~~d~~g~sDPyv~v~~~--~---~~~~T~~~~~t~nP~W~e~f~f~i~~~---~~~L~i~v~d~ 83 (492)
..+.|.|.|++|++|+.++..+.+||||++++. + .+.+|+++++++||.|||+|.|.+... ...|.|+|||+
T Consensus 148 ~~~~l~v~v~~a~~L~~~d~~~~~dpyv~v~~~~~~~~~~~~kT~v~~~t~nP~wne~f~f~v~~~~l~~~~l~i~V~d~ 227 (284)
T 2r83_A 148 TAGKLTVVILEAKNLKKMDVGGLSDPYVKIHLMQNGKRLKKKKTTIKKNTLNPYYNESFSFEVPFEQIQKVQVVVTVLDY 227 (284)
T ss_dssp TTTEEEEEEEEEESCCCCSTTSCCCEEEEEEEEETTEEEEEEECCCCCSCSSCEEEEEEEEECCTTTGGGEEEEEEEEEC
T ss_pred cCCceEEEEEEeECCCCcCCCCCcCeEEEEEEEeCCcEeeeeccceecCCCCCEEceeEEEeCCHHHhCceEEEEEEEeC
Confidence 356899999999999999999999999999973 2 356899999999999999999998643 34699999999
Q ss_pred CCCCCCceeEEEEEEcccC--------------CCcccEEEEccC
Q 011161 84 DIIWKSTVLGSVIVTVESE--------------GQTGAVWYTLDS 114 (492)
Q Consensus 84 d~~~~dd~IG~~~i~l~~l--------------~~~~~~w~~L~~ 114 (492)
+.++++++||++.+++..+ +....+|++|.+
T Consensus 228 d~~~~~~~iG~~~i~l~~~~~~~~~w~~~~~~~~~~~~~W~~L~~ 272 (284)
T 2r83_A 228 DKIGKNDAIGKVFVGYNSTGAELRHWSDMLANPRRPIAQWHTLQV 272 (284)
T ss_dssp CSSSCCCEEEEEEEETTCCHHHHHHHHHHHHSTTSCEEEEEECBC
T ss_pred CCCCCCcEEEEEEECCCCCCcHHHHHHHHHHCCCCchheeeecCC
Confidence 9999999999999999864 233457888865
No 41
>1djx_A PLC-D1, phosphoinositide-specific phospholipase C, isozyme delta1; phosphoric diester hydrolase, hydrolase, lipid degradation, transducer; HET: I3P; 2.30A {Rattus norvegicus} SCOP: a.39.1.7 b.7.1.1 c.1.18.1 PDB: 1djg_A 1dji_A 1djh_A* 1djw_A* 1djy_A* 1djz_A* 2isd_A 1qas_A 1qat_A
Probab=99.45 E-value=1.1e-12 Score=142.26 Aligned_cols=106 Identities=21% Similarity=0.303 Sum_probs=92.2
Q ss_pred CceEEEEEEEEeecCCCCCC--CCCCCcEEEEEECC-----eeeeeeccCCC-CCCeeccEEEEEeeCCC-cEEEEEEEE
Q 011161 12 SAYLIKLELLAAKNLIGANL--NGTSDPYAIITCGS-----EKRFSSMVPGS-RYPMWGEEFNFSVDELP-VQIIVTIYD 82 (492)
Q Consensus 12 ~~~~L~V~Vi~a~~L~~~d~--~g~sDPyv~v~~~~-----~~~~T~~~~~t-~nP~W~e~f~f~i~~~~-~~L~i~v~d 82 (492)
..+.|.|+|++|++|+..+. .+.+||||+|.+.+ .+.+|++++++ +||+|||+|.|.+..+. ..|.|+|||
T Consensus 495 ~~~~L~V~Vi~A~~L~~~d~~~~~~~DPYV~V~l~g~~~d~~~~kTkvi~~ng~NP~WnE~f~F~v~~~el~~L~~~V~D 574 (624)
T 1djx_A 495 RPERLRVRIISGQQLPKVNKNKNSIVDPKVIVEIHGVGRDTGSRQTAVITNNGFNPRWDMEFEFEVTVPDLALVRFMVED 574 (624)
T ss_dssp CCEEEEEEEEEEESCCCCSSCSSSCCCEEEEEEEESSGGGCEEEECCCCTTCSSSCEEEEEEEEEESCGGGCEEEEEEEE
T ss_pred cceEEEEEEEEcCCCCcccccccCCCCcEEEEEEecCCCCcceeecccccCCCCCCccCceEEEEEecCCCCEEEEEEEE
Confidence 57899999999999999884 78999999999843 57799999987 99999999999986543 569999999
Q ss_pred cCCCCCCceeEEEEEEcccCCCcccEEEEccCCCce
Q 011161 83 WDIIWKSTVLGSVIVTVESEGQTGAVWYTLDSPSGQ 118 (492)
Q Consensus 83 ~d~~~~dd~IG~~~i~l~~l~~~~~~w~~L~~~~G~ 118 (492)
+|..+++++||++.++|..+..+ ..|++|....|+
T Consensus 575 ~D~~~~dd~iG~~~ipl~~L~~G-~r~v~L~d~~g~ 609 (624)
T 1djx_A 575 YDSSSKNDFIGQSTIPWNSLKQG-YRHVHLLSKNGD 609 (624)
T ss_dssp CCSSSCCEEEEEEEEEGGGBCCE-EEEEEEECTTSC
T ss_pred cCCCCCCceeEEEEEEHHHcCCC-cEEEeCCCCCcC
Confidence 99999999999999999999664 579999776555
No 42
>1cjy_A CPLA2, protein (cytosolic phospholipase A2); lipid-binding, hydrolase; HET: MES; 2.50A {Homo sapiens} SCOP: b.7.1.1 c.19.1.2 PDB: 1bci_A
Probab=99.43 E-value=3.4e-13 Score=147.52 Aligned_cols=106 Identities=20% Similarity=0.358 Sum_probs=93.5
Q ss_pred CCCCceEEEEEEEEeecCCC---CCCCCCCCcEEEEEEC---CeeeeeeccCCCCCCeeccEEEEEeeC-CCcEEEEEEE
Q 011161 9 QTNSAYLIKLELLAAKNLIG---ANLNGTSDPYAIITCG---SEKRFSSMVPGSRYPMWGEEFNFSVDE-LPVQIIVTIY 81 (492)
Q Consensus 9 ~~~~~~~L~V~Vi~a~~L~~---~d~~g~sDPyv~v~~~---~~~~~T~~~~~t~nP~W~e~f~f~i~~-~~~~L~i~v~ 81 (492)
.....+.|.|+|++|++|+. +|..|.+||||++.+. ..+.+|+++++++||+|||+|.|.+.. ....|.|+||
T Consensus 13 e~~~~g~L~V~Vi~A~nL~~~~~~D~~g~sDPYV~V~l~~~~~~k~kTkvik~tlNPvWNEtF~F~v~~~~~~~L~~~V~ 92 (749)
T 1cjy_A 13 EHQYSHKFTVVVLRATKVTKGAFGDMLDTPDPYVELFISTTPDSRKRTRHFNNDINPVWNETFEFILDPNQENVLEITLM 92 (749)
T ss_dssp CCCCCEEEEEEEEEEECCCSCHHHHHHCCCCEEEEEECTTSTTCCEECCCCTTCSSCEEEEEEEEEECTTSCCBCEEEEE
T ss_pred cCCCccEEEEEEEEEECCCCccccCCCCCcCeEEEEEEecCCCCeEecceEcCCCCCeeeeEEEEEecCCCCCEEEEEEE
Confidence 34567899999999999998 8888999999999997 457799999999999999999999976 3567999999
Q ss_pred EcCCCCCCceeEEEEEEcccC--CCcccEEEEccCC
Q 011161 82 DWDIIWKSTVLGSVIVTVESE--GQTGAVWYTLDSP 115 (492)
Q Consensus 82 d~d~~~~dd~IG~~~i~l~~l--~~~~~~w~~L~~~ 115 (492)
|+|.++ +++||++.+++.++ +.....|++|.+.
T Consensus 93 D~D~~~-ddfIG~v~I~L~~L~~g~~~~~w~~L~~~ 127 (749)
T 1cjy_A 93 DANYVM-DETLGTATFTVSSMKVGEKKEVPFIFNQV 127 (749)
T ss_dssp ECCSSS-CEEEEEECCBSTTSCTTCCCCEEEEETTT
T ss_pred ECCCCC-CceeEEEEEEHHHcCCCCceEEEEecCCC
Confidence 999998 99999999999998 4446899999863
No 43
>3l9b_A Otoferlin; C2-domain, beta-sheets, cell membrane, synaptic V hearing, membrane, synapse, transmembrane, membrane protein; 1.95A {Rattus norvegicus}
Probab=99.41 E-value=2.7e-12 Score=110.98 Aligned_cols=115 Identities=14% Similarity=0.243 Sum_probs=92.5
Q ss_pred CCCCCceEEEEEEEEeecCCCCCCCCCCCcEEEEEECCeeeeeeccC-CCCCCeeccEEEEEee---CCCcEEEEEEEEc
Q 011161 8 PQTNSAYLIKLELLAAKNLIGANLNGTSDPYAIITCGSEKRFSSMVP-GSRYPMWGEEFNFSVD---ELPVQIIVTIYDW 83 (492)
Q Consensus 8 ~~~~~~~~L~V~Vi~a~~L~~~d~~g~sDPyv~v~~~~~~~~T~~~~-~t~nP~W~e~f~f~i~---~~~~~L~i~v~d~ 83 (492)
...+..--|+|.|.+|.+|+ +++|||+++.+.+.+++|+++. ++.||.|||.|.+.+. +....|.|.|+|+
T Consensus 15 ~~~~~~msL~V~l~~a~~Lp-----g~~Dp~akv~FRg~k~kTkvi~~~~~npvfnE~F~wpl~~~ld~~e~L~v~V~d~ 89 (144)
T 3l9b_A 15 VPRGSHMALIVHLKTVSELR-----GRADRIAKVTFRGQSFYSRVLENCEDVADFDETFRWPVASSIDRNEVLEIQIFNY 89 (144)
T ss_dssp ----CCEEEEEEEEEEESCC-----SCEEEEEEEEETTEEEECCCEEEECSCEEEEEEEEEEESSCCCTTCEEEEEEEEE
T ss_pred ccCCCcEEEEEEEEEecCCC-----CCCCCeEEEEEeccceeeEEeccCCCCceEcceEEecCCCCCCCCCEEEEEEEEC
Confidence 44456678999999999997 5789999999999999999998 6999999999999985 3356699999999
Q ss_pred CCCCCCceeEEEEEEcccC--CCcccEEEEccCCC-----ceEEEEEEeee
Q 011161 84 DIIWKSTVLGSVIVTVESE--GQTGAVWYTLDSPS-----GQVCLHIKTIK 127 (492)
Q Consensus 84 d~~~~dd~IG~~~i~l~~l--~~~~~~w~~L~~~~-----G~i~l~l~~~~ 127 (492)
++++++.+||.+.++|.++ .+....+-.|.+.+ +.|.+.+.|.+
T Consensus 90 ~~v~~nrlIG~~~i~Lq~lv~~~~l~l~~~LvD~n~~~~~a~I~l~l~Y~p 140 (144)
T 3l9b_A 90 SKVFSNKLIGTFRMVLQKVVEENRVEVSDTLIDDNNAIIKTSLSMEVRYQA 140 (144)
T ss_dssp CTTSCCEEEEEEEEESHHHHHHSEEEEEEEEECTTSCEEEEEEEEEEEEEE
T ss_pred ccccCCCEEEEEEEEhHHhccCCeEEEeecccCCCCCccccEEEEEEEecC
Confidence 9999999999999999998 33344556665533 55667766665
No 44
>1dqv_A Synaptotagmin III; beta sandwich, calcium ION, C2 domain, endocytosis/exocytosis complex; 3.20A {Rattus rattus} SCOP: b.7.1.2 b.7.1.2 PDB: 3hn8_A
Probab=99.37 E-value=1.4e-13 Score=136.36 Aligned_cols=102 Identities=26% Similarity=0.398 Sum_probs=86.2
Q ss_pred CceEEEEEEEEeecCCCCCCCCCCCcEEEEEEC--C---eeeeeeccCCCCCCeeccEEEEEeeCC---CcEEEEEEEEc
Q 011161 12 SAYLIKLELLAAKNLIGANLNGTSDPYAIITCG--S---EKRFSSMVPGSRYPMWGEEFNFSVDEL---PVQIIVTIYDW 83 (492)
Q Consensus 12 ~~~~L~V~Vi~a~~L~~~d~~g~sDPyv~v~~~--~---~~~~T~~~~~t~nP~W~e~f~f~i~~~---~~~L~i~v~d~ 83 (492)
..+.|.|.|++|++|+.+|..|.+||||++++. + .+++|+++++++||.|||+|.|.+... ...|.|+|||+
T Consensus 150 ~~~~l~v~v~~a~~L~~~d~~g~~Dpyv~v~l~~~~~~~~~~kT~v~~~t~nP~wne~f~f~v~~~~l~~~~L~i~V~d~ 229 (296)
T 1dqv_A 150 TAGLLTVTIIKASNLKAMDLTGFSDPYVKASLISEGRRLKKRKTSIKKNTLNPTYNEALVFDVAPESVENVGLSIAVVDY 229 (296)
T ss_dssp TTTEEEEEEEEEESCCCCSSSSCCCEEEEECCCTTCCTTSCEECCCCCSCSSCEEEECCCCCCCSGGGGSCCCCCEEEEC
T ss_pred ccceeEEEEEEeecCCccCCCCCCCcEEEEEEEeCCcCccceecceecCCCCCeECceEEEEcCHHHccCcEEEEEEEeC
Confidence 357899999999999999999999999999985 2 456899999999999999999988543 24699999999
Q ss_pred CCCCCCceeEEEEEEcccCCC-cccEEEEcc
Q 011161 84 DIIWKSTVLGSVIVTVESEGQ-TGAVWYTLD 113 (492)
Q Consensus 84 d~~~~dd~IG~~~i~l~~l~~-~~~~w~~L~ 113 (492)
+.++++++||.+.+++..++. ...+|+++.
T Consensus 230 d~~~~~~~iG~~~i~l~~~~~~~~~~W~~~~ 260 (296)
T 1dqv_A 230 DCIGHNEVIGVCRVGPEAADPHGREHWAEML 260 (296)
T ss_dssp CSSSCCEEEEECCCSSCTTCHHHHHHHHTSS
T ss_pred CCCCCCceEEEEEECCccCCchhHHHHHHHH
Confidence 999999999999999988754 445555543
No 45
>3bxj_A RAS GTPase-activating protein syngap; GTPase activation, membrane, phosphoprotein, SH3-binding, signaling protein; 3.00A {Rattus norvegicus}
Probab=99.28 E-value=2.2e-13 Score=143.74 Aligned_cols=99 Identities=21% Similarity=0.290 Sum_probs=15.4
Q ss_pred CCCceEEEEEEEEeecCCCCCCCCCCCcEEEEEECCe-eeeeeccCCC---CCCeeccEEEEEeeCCCcEEEEEEEEc-C
Q 011161 10 TNSAYLIKLELLAAKNLIGANLNGTSDPYAIITCGSE-KRFSSMVPGS---RYPMWGEEFNFSVDELPVQIIVTIYDW-D 84 (492)
Q Consensus 10 ~~~~~~L~V~Vi~a~~L~~~d~~g~sDPyv~v~~~~~-~~~T~~~~~t---~nP~W~e~f~f~i~~~~~~L~i~v~d~-d 84 (492)
.+..+.|.|+|++|++|+++| ||||.+++++. ..||++++++ +||.|||+|.|.+......|.|+|||. |
T Consensus 7 ~r~~~~L~V~VieAk~L~~~d-----dpYv~v~l~~~~~~kT~v~~kt~~glnP~WnE~F~f~~~~~~~~L~v~V~d~~d 81 (483)
T 3bxj_A 7 RRVDNVLKLWIIEARELPPKK-----RYYCELCLDDMLYARTTSKPRSASGDTVFWGEHFEFNNLPAVRALRLHLYRDSD 81 (483)
T ss_dssp EEEEECC--------------------------------------------------CCEECC-----------------
T ss_pred ceeccEEEEEEEEcCCcCCCC-----CCeEEEEECCeEEeeeeEEeCCCCCCCCccccEEEEecCCCccEEEEEEEecCC
Confidence 345678999999999999887 99999999765 5689999998 999999999998644456799999994 5
Q ss_pred ---CCCCCceeEEEEEEcccC--CCcccEEEEcc
Q 011161 85 ---IIWKSTVLGSVIVTVESE--GQTGAVWYTLD 113 (492)
Q Consensus 85 ---~~~~dd~IG~~~i~l~~l--~~~~~~w~~L~ 113 (492)
..+++++||.+.+++.++ +...+.||+|.
T Consensus 82 ~~~~~~~d~~lG~v~i~l~~l~~~~~~~~W~~L~ 115 (483)
T 3bxj_A 82 KKRKKDKAGYVGLVTVPVATLAGRHFTEQWYPVT 115 (483)
T ss_dssp -------------------------CCEECC---
T ss_pred ccccCCCCceEEEEEEEHHHhcCCCCCCeEEECC
Confidence 367899999999999998 45567899994
No 46
>3pfq_A PKC-B, PKC-beta, protein kinase C beta type; phosphorylation, transferase; HET: TPO SEP ANP; 4.00A {Rattus norvegicus} PDB: 1tbn_A 1tbo_A 2e73_A
Probab=99.22 E-value=1.8e-11 Score=134.48 Aligned_cols=102 Identities=27% Similarity=0.494 Sum_probs=90.3
Q ss_pred ceEEEEEEEEeecCCCCCCCCCCCcEEEEEE-----CCeeeeeeccCCCCCCeeccEEEEEeeC--CCcEEEEEEEEcCC
Q 011161 13 AYLIKLELLAAKNLIGANLNGTSDPYAIITC-----GSEKRFSSMVPGSRYPMWGEEFNFSVDE--LPVQIIVTIYDWDI 85 (492)
Q Consensus 13 ~~~L~V~Vi~a~~L~~~d~~g~sDPyv~v~~-----~~~~~~T~~~~~t~nP~W~e~f~f~i~~--~~~~L~i~v~d~d~ 85 (492)
.+.|.|.|++|++|.++|..|.+||||++.+ ...+.+|+++++++||.|||+|.|.+.. ....|.|+|||+|.
T Consensus 171 ~~~L~V~v~~a~~L~~~d~~g~sDPyvkv~l~p~~~~~~k~kT~v~~~tlnP~wne~f~f~~~~~~~~~~L~v~v~d~d~ 250 (674)
T 3pfq_A 171 REVLIVVVRDAKNLVPMDPNGLSDPYVKLKLIPDPKSESKQKTKTIKSSLNPEWNETFRFQLKESDKDRRLSVEIWDWDL 250 (674)
T ss_dssp SSEEEEEEEEEESCCCCSTTSSCCEEEEEEEESCSSCCSCEECCCCSSCSSCEEEEEEEEECCSTTTTCEEEEEEEECCS
T ss_pred cceeeeeeecccccCCCCcccccCcccccccccCccccccccccccccccCCCccceeeeecccCCccceeeeEEeeccc
Confidence 4678999999999999999999999999998 3456799999999999999999999853 34569999999999
Q ss_pred CCCCceeEEEEEEcccC-CCcccEEEEccC
Q 011161 86 IWKSTVLGSVIVTVESE-GQTGAVWYTLDS 114 (492)
Q Consensus 86 ~~~dd~IG~~~i~l~~l-~~~~~~w~~L~~ 114 (492)
.+++++||.+.+++.++ ....+.|+.|..
T Consensus 251 ~~~dd~iG~~~i~l~~l~~~~~~~w~~Lls 280 (674)
T 3pfq_A 251 TSRNDFMGSLSFGISELQKAGVDGWFKLLS 280 (674)
T ss_dssp SSCCEECCBCCCBTTHHHHCCEEEEEECBC
T ss_pred ccccccccccccchhhhccCCcccceeecc
Confidence 99999999999999988 444689999876
No 47
>3qr0_A Phospholipase C-beta (PLC-beta); PH domain, EF hand, C2 domain, TIM barrel domain, hydrolase, calcium binding, phospholipid binding; 2.00A {Sepia officinalis} PDB: 3qr1_A
Probab=99.06 E-value=1.4e-09 Score=120.29 Aligned_cols=106 Identities=16% Similarity=0.216 Sum_probs=84.6
Q ss_pred ceEEEEEEEEeecCCCCCCCCCCCcEEEEEECC-------eeeeeeccCC-CCCCeeccE-EEEE-eeCCC-cEEEEEEE
Q 011161 13 AYLIKLELLAAKNLIGANLNGTSDPYAIITCGS-------EKRFSSMVPG-SRYPMWGEE-FNFS-VDELP-VQIIVTIY 81 (492)
Q Consensus 13 ~~~L~V~Vi~a~~L~~~d~~g~sDPyv~v~~~~-------~~~~T~~~~~-t~nP~W~e~-f~f~-i~~~~-~~L~i~v~ 81 (492)
.+.|+|+|++|++|+.. .+||||+|.+.+ .+.+|+++.+ ++||+|||+ |.|. +..+. ..|.|+||
T Consensus 649 ~~~L~V~Visaq~L~~~----~~DPYV~V~l~g~p~d~~~~k~kTkvv~~nglNPvWNE~~F~F~~v~~pela~Lrf~V~ 724 (816)
T 3qr0_A 649 AGTIEIKIISAQFLSDK----QISSYVEVEMYGLPTDTVRKKFKTKIIENNGMDPYYDEKVFVFKKVVLPDLAVVRIIVS 724 (816)
T ss_dssp CEEEEEEEEEEECCCSS----CCCEEEEEEEESSGGGCEEEEEECCCBCSCSSCCBCCCCCEEEEEESCGGGCEEEEEEE
T ss_pred ceEEEEEEEEcccCCCC----CCCCeEEEEEeCCCcccccceeeeEEecCCCCCCeEcCceeEEccccCCCccEEEEEEE
Confidence 57899999999999753 589999999853 4668999876 599999998 9998 64433 46999999
Q ss_pred EcCCCCCCceeEEEEEEcccCCCcccEEEEccCCCc------eEEEEEEeee
Q 011161 82 DWDIIWKSTVLGSVIVTVESEGQTGAVWYTLDSPSG------QVCLHIKTIK 127 (492)
Q Consensus 82 d~d~~~~dd~IG~~~i~l~~l~~~~~~w~~L~~~~G------~i~l~l~~~~ 127 (492)
|++ ++|||++.++|..+..+ .++++|..+.| .+.+++.+.-
T Consensus 725 D~d----ddfiG~~~ipL~~L~~G-yR~vpL~~~~g~~~~~atLfv~i~~~~ 771 (816)
T 3qr0_A 725 EEN----GKFIGHRVMPLDGIKPG-YRHVPLRNESNRPLGLASVFAHIVAKD 771 (816)
T ss_dssp ETT----SCEEEEEEEESTTCCCE-EEEEEEECTTSCEEEEEEEEEEEEEEE
T ss_pred ecC----CCeeeEEEEEHHHcCCc-ceEEEEeCCCCCCCCceEEEEEEEEEe
Confidence 985 78999999999999765 56888877554 4556666553
No 48
>3ohm_B 1-phosphatidylinositol-4,5-bisphosphate phosphodi beta-3; PH domain, EF hand, TIM barrel, C2 domain, GTPase, lipase, C binding, GTP binding; HET: GDP; 2.70A {Homo sapiens}
Probab=99.03 E-value=1.3e-09 Score=121.32 Aligned_cols=106 Identities=15% Similarity=0.237 Sum_probs=84.2
Q ss_pred ceEEEEEEEEeecCCCCCCCCCCCcEEEEEECC------eeeeeeccCC-CCCCeecc-EEEEE-eeCC-CcEEEEEEEE
Q 011161 13 AYLIKLELLAAKNLIGANLNGTSDPYAIITCGS------EKRFSSMVPG-SRYPMWGE-EFNFS-VDEL-PVQIIVTIYD 82 (492)
Q Consensus 13 ~~~L~V~Vi~a~~L~~~d~~g~sDPyv~v~~~~------~~~~T~~~~~-t~nP~W~e-~f~f~-i~~~-~~~L~i~v~d 82 (492)
...|.|+|++|++|+.. .+||||+|.+.+ .+.+|+++.+ +.||+||| +|.|. +..+ ...|.|+|||
T Consensus 724 ~~~L~V~Visaq~L~~~----~~DPYV~V~l~g~p~D~~~k~kTkvi~~NglNPvWnEe~F~F~~V~~pela~Lrf~V~D 799 (885)
T 3ohm_B 724 ANALRVKVISGQFLSDR----KVGIYVEVDMFGLPVDTRRKYRTRTSQGNSFNPVWDEEPFDFPKVVLPTLASLRIAAFE 799 (885)
T ss_dssp CEEEEEEEEEEESCCSS----CCCEEEEEEEESSTTTCBCCCCCCCCSSCSSSCBCCCCCEEEEEESCGGGCEEEEEEEE
T ss_pred ceEEEEEEEEeccCccc----CCCcEEEEEEeCCCcccccceeeEEeeCCCcCCeeccceeEEeeEEcCCcCEEEEEEEc
Confidence 46899999999999753 689999999843 2468999976 59999999 69998 6433 3469999999
Q ss_pred cCCCCCCceeEEEEEEcccCCCcccEEEEccCCC------ceEEEEEEeee
Q 011161 83 WDIIWKSTVLGSVIVTVESEGQTGAVWYTLDSPS------GQVCLHIKTIK 127 (492)
Q Consensus 83 ~d~~~~dd~IG~~~i~l~~l~~~~~~w~~L~~~~------G~i~l~l~~~~ 127 (492)
+| ++|||++.++|..+..+ .++++|..+. +.|.+++.+..
T Consensus 800 ~d----ddfiG~~~lpL~~L~~G-yR~vpL~~~~g~~l~~atLfv~i~~~~ 845 (885)
T 3ohm_B 800 EG----GKFVGHRILPVSAIRSG-YHYVCLRNEANQPLCLPALLIYTEASD 845 (885)
T ss_dssp TT----TEEEEEEEEETTTCCCE-EEEEEEECTTSCEEEEEEEEEEEEEEE
T ss_pred CC----ccEEeeEEEEHHHcCCC-ceEEEecCCCCCccCceEEEEEEEEEe
Confidence 87 78999999999999765 5678887754 44667776663
No 49
>2zkm_X 1-phosphatidylinositol-4,5-bisphosphate phosphodiesterase beta-2; phospholipase C, phosphoinositide phospholipase, PLC-beta-2, calcium, coiled coil; 1.62A {Homo sapiens} SCOP: a.39.1.7 b.7.1.1 b.55.1.1 c.1.18.1 PDB: 2fju_B
Probab=98.99 E-value=2.8e-09 Score=118.28 Aligned_cols=98 Identities=16% Similarity=0.218 Sum_probs=79.6
Q ss_pred CceEEEEEEEEeecCCCCCCCCCCCcEEEEEECC------eeeeee-ccCC-CCCCeecc-EEEE-EeeCCC-cEEEEEE
Q 011161 12 SAYLIKLELLAAKNLIGANLNGTSDPYAIITCGS------EKRFSS-MVPG-SRYPMWGE-EFNF-SVDELP-VQIIVTI 80 (492)
Q Consensus 12 ~~~~L~V~Vi~a~~L~~~d~~g~sDPyv~v~~~~------~~~~T~-~~~~-t~nP~W~e-~f~f-~i~~~~-~~L~i~v 80 (492)
..+.|.|+|++|++|+. +.+||||+|.+.+ .+.+|+ ++.+ ++||+||| +|.| .+..+. ..|.|.|
T Consensus 676 ~~~~L~V~Visa~~L~~----~~~DPYV~V~l~g~p~d~~~k~kTk~vv~~n~~NPvWnEe~f~F~~v~~~el~~Lr~~V 751 (799)
T 2zkm_X 676 VATTLSITVISGQFLSE----RSVRTYVEVELFGLPGDPKRRYRTKLSPSTNSINPVWKEEPFVFEKILMPELASLRVAV 751 (799)
T ss_dssp TCEEEEEEEEEEESCCS----SCCCEEEEEEEECCTTSCCCCEECCCCSSSCCSSCBCCCCCEEEEEESSGGGCEEEEEE
T ss_pred eeeeEEEEEEeccccCc----cCCCcEEEEEEEecCCCcccceeecccccCCCCCCeeecceEEEEEEccCCccEEEEEE
Confidence 46789999999999975 4689999999832 256899 7765 69999999 6999 775432 3699999
Q ss_pred EEcCCCCCCceeEEEEEEcccCCCcccEEEEccCCCce
Q 011161 81 YDWDIIWKSTVLGSVIVTVESEGQTGAVWYTLDSPSGQ 118 (492)
Q Consensus 81 ~d~d~~~~dd~IG~~~i~l~~l~~~~~~w~~L~~~~G~ 118 (492)
||+| +++||++.++|..+..+ ..|++|....|+
T Consensus 752 ~D~d----~d~iG~~~ipl~~L~~G-~r~v~L~~~~g~ 784 (799)
T 2zkm_X 752 MEEG----NKFLGHRIIPINALNSG-YHHLCLHSESNM 784 (799)
T ss_dssp EETT----TEEEEEEEEEGGGBCCE-EEEEEEECTTCC
T ss_pred EEeC----CCccceEeeehhhcCCC-cEEEeccCCCCC
Confidence 9987 78999999999999664 678999775555
No 50
>1yrk_A NPKC-delta, protein kinase C, delta type; C2 domain, protein binding; HET: PTR; 1.70A {Homo sapiens} PDB: 1bdy_A
Probab=98.99 E-value=1.1e-08 Score=85.98 Aligned_cols=108 Identities=13% Similarity=0.208 Sum_probs=83.6
Q ss_pred ceEEEEEEEEeecCCCCCCCCCCCcEEEEEECCee----eee-eccCCCCCCeeccEEEEEeeCCCcEEEEEEEEcCCCC
Q 011161 13 AYLIKLELLAAKNLIGANLNGTSDPYAIITCGSEK----RFS-SMVPGSRYPMWGEEFNFSVDELPVQIIVTIYDWDIIW 87 (492)
Q Consensus 13 ~~~L~V~Vi~a~~L~~~d~~g~sDPyv~v~~~~~~----~~T-~~~~~t~nP~W~e~f~f~i~~~~~~L~i~v~d~d~~~ 87 (492)
...|+|.+.++.--..+......||||.+.++... .+| .+.++|..|.|+++|.-.+.+ .+.|.|.|++...
T Consensus 5 ~~flRi~~~~~~~~~~~~~~~~lDPy~aV~vdE~~~~e~g~t~~~K~kT~~P~Wne~Fd~~V~~-Gr~l~i~Vfh~a~-- 81 (126)
T 1yrk_A 5 APFLRIAFNSYELGSLQAEDEANQPFCAVKMKEALSTERGKTLVQKKPTMYPEWKSTFDAHIYE-GRVIQIVLMRAAE-- 81 (126)
T ss_dssp CCEEEEEEEEEECSSCCCSSSSCCCEEEEEEEEEEEETTEEEEECCSCCBCCCTTCEEEEECCT-TCEEEEEEEEETT--
T ss_pred CccEEeeeccccccccCCccccCCceEEEEeeeeEEcccceeecccCCCCCcCccceEEeeeeC-CEEEEEEEEcCCC--
Confidence 46788888665532212223468999999986433 244 667889999999999999876 7889999997554
Q ss_pred CCceeEEEEEEcccCC-------CcccEEEEccCCCceEEEEEEee
Q 011161 88 KSTVLGSVIVTVESEG-------QTGAVWYTLDSPSGQVCLHIKTI 126 (492)
Q Consensus 88 ~dd~IG~~~i~l~~l~-------~~~~~w~~L~~~~G~i~l~l~~~ 126 (492)
+|++.|++++.++. ...+.|++|++ .|++++.+++.
T Consensus 82 --~fvAn~tV~~edL~~~c~~~~g~~e~WvdLeP-~Gkl~~~i~~~ 124 (126)
T 1yrk_A 82 --EPVSEVTVGVSVLAERCKKNNGKAEFWLDLQP-QAKVLMSVQYF 124 (126)
T ss_dssp --EEEEEEEEEHHHHHHHHHTTTTEEEEEEECBS-SCEEEEEEEEE
T ss_pred --CeeeEEEEEHHHHHhhhccCCCceEEEEeccc-CcEEEEEEEEe
Confidence 89999999999872 34578999998 89999999876
No 51
>2enj_A NPKC-theta, protein kinase C theta type; beta-sandwich, phosphotyrosine binding, TCR, T-cell, diacylglycerol, phorbol ester, structural genomics; NMR {Homo sapiens}
Probab=98.91 E-value=1.2e-08 Score=86.70 Aligned_cols=113 Identities=11% Similarity=0.232 Sum_probs=86.9
Q ss_pred CCCCceEEEEEEEEeecCCCCC-CCCCCCcEEEEEECCee----eee-eccCCCCCCeeccEEEEEeeCCCcEEEEEEEE
Q 011161 9 QTNSAYLIKLELLAAKNLIGAN-LNGTSDPYAIITCGSEK----RFS-SMVPGSRYPMWGEEFNFSVDELPVQIIVTIYD 82 (492)
Q Consensus 9 ~~~~~~~L~V~Vi~a~~L~~~d-~~g~sDPyv~v~~~~~~----~~T-~~~~~t~nP~W~e~f~f~i~~~~~~L~i~v~d 82 (492)
++.-...|+|.+.+..-.+.+. .....||||.|.++... .+| .+.++|..|.|+++|.-.+.+ .+.|.|.|++
T Consensus 5 ~~~m~~flRi~l~~~~~~~~~~~~~~~lDPY~aV~VdE~~~te~gqtl~~KkkT~~P~Wne~Fd~~V~~-Gr~l~i~Vfh 83 (138)
T 2enj_A 5 SSGMSPFLRIGLSNFDCGSCQSCQGEAVNPYCAVLVKEYVESENGQMYIQKKPTMYPPWDSTFDAHINK-GRVMQIIVKG 83 (138)
T ss_dssp CSSCCCCEEEEEEEEECCCCCCSCCCCCCCEEEEEEEEEEEETTEEEEEEEEEEECCCSSSEEEECCCS-SCEEEEEEEC
T ss_pred ccccCcceEEEeeccccCCCCCcccccCCceEEEEeeeeeeccCceeecccCCCCCccccceEeeeEEC-CeEEEEEEEc
Confidence 4455678999987765433222 13468999999986432 456 666778999999999998876 7889999996
Q ss_pred cCCCCCCceeEEEEEEcccCC-------CcccEEEEccCCCceEEEEEEeee
Q 011161 83 WDIIWKSTVLGSVIVTVESEG-------QTGAVWYTLDSPSGQVCLHIKTIK 127 (492)
Q Consensus 83 ~d~~~~dd~IG~~~i~l~~l~-------~~~~~w~~L~~~~G~i~l~l~~~~ 127 (492)
... +|++.+++++.++. ...+.|++|++ .|++++.+++..
T Consensus 84 ~a~----~fVAn~tV~~edL~~~ck~~~g~~e~WvdLeP-~Gkl~v~i~~~~ 130 (138)
T 2enj_A 84 KNV----DLISETTVELYSLAERCRKNNGKTEIWLELKP-QGRMLMNARYFL 130 (138)
T ss_dssp SSC----SCCEEEEEESHHHHHHHHHTTTCEEEEEECBS-SCEEEEEEEECC
T ss_pred CCC----CeeeEEEEEHHHHHhhhccCCCceEEEEeccc-CcEEEEEEEEEE
Confidence 443 89999999999882 34578999998 899999999863
No 52
>2hth_B Vacuolar protein sorting protein 36; GLUE domain, PH domain, viral budding, ubiquitin complex, protein transport; 2.70A {Homo sapiens} SCOP: b.55.1.12 PDB: 2dx5_A
Probab=93.28 E-value=1 Score=38.48 Aligned_cols=90 Identities=13% Similarity=0.184 Sum_probs=53.5
Q ss_pred ceEEEEecCeeEEEeccCCceeEEEEeccceeeEeecccccc-cCcEEEEEecCC-C-CCCCCCCCCCCCceeEEEeeec
Q 011161 192 HGRMYVSAWHICFHSNAFSRQMKVIIPIGDIDEIQRSQHAFI-NPAITIILRMGA-G-GHGVPPLGSPDGRVRYKFASFW 268 (492)
Q Consensus 192 ~G~lyis~~~~cF~s~~~g~~~~~~i~~~~I~~i~k~~~~~~-~~~i~i~~~~g~-~-~~~~~~~~~~~~~~~~~f~sf~ 268 (492)
.|++|+|.+++||...-- ....+.|||..|..++.....+. .|-|.+...... + ..|-. ..+.....++.|.+=
T Consensus 39 ~G~l~LTshRli~~d~~~-~~~s~~lpl~~v~~~e~~~~~f~~s~Ki~l~l~~~~~~~~~gp~-~~s~~~~~kLsFr~G- 115 (140)
T 2hth_B 39 AGTLLLSTHRLIWRDQKN-HECCMAILLSQIVFIEEQAAGIGKSAKIVVHLHPAPPNKEPGPF-QSSKNSYIKLSFKEH- 115 (140)
T ss_dssp CEEEEEESSEEEEEETTC-CSCCEEEEGGGEEEEEEECCTTSSCCEEEEEECCCCCCSSSCCC-STTSCCEEEEEETTS-
T ss_pred CCEEEEecCEEEEecCCC-CceEEEEEhHHeeeeeeeccccccCceEEEEecCCCccCCCCCc-ccccCcEEEEEEcCC-
Confidence 499999999999976543 45789999999999999986532 234444443211 0 00000 011112334444442
Q ss_pred chHHHHHHHHHHHHhh
Q 011161 269 NRNHALRQLQRTAKNY 284 (492)
Q Consensus 269 ~rd~~~~~l~~~~~~~ 284 (492)
..++-+..|.+.+..+
T Consensus 116 g~~eF~~~L~~al~~k 131 (140)
T 2hth_B 116 GQIEFYRRLSEEMTQR 131 (140)
T ss_dssp CHHHHHHHHHHHHHHC
T ss_pred CChHHHHHHHHHHHHh
Confidence 2467777777776553
No 53
>2cay_A VPS36 PH domain, vacuolar protein sorting protein 36; transport, ESCRT-II, lipid-binding, multivesicular bodies, membrane; 1.9A {Saccharomyces cerevisiae} SCOP: b.55.1.12
Probab=93.02 E-value=0.46 Score=40.96 Aligned_cols=84 Identities=17% Similarity=0.190 Sum_probs=55.9
Q ss_pred cceEEEEecCeeEEEeccCCceeEEEEeccceeeEeecccccccCcEEEEEecCCCCCCCCCCCCCCCceeEEEeeecch
Q 011161 191 YHGRMYVSAWHICFHSNAFSRQMKVIIPIGDIDEIQRSQHAFINPAITIILRMGAGGHGVPPLGSPDGRVRYKFASFWNR 270 (492)
Q Consensus 191 ~~G~lyis~~~~cF~s~~~g~~~~~~i~~~~I~~i~k~~~~~~~~~i~i~~~~g~~~~~~~~~~~~~~~~~~~f~sf~~r 270 (492)
-.|++|+|+.+++|-..--.....+.+||..|.+++...+.+ ..++.|+..--.+ -++....++.|.+=..
T Consensus 51 k~G~lyLTshRIIyv~~~~~~~~SfslPL~~v~~~e~~~~~f-g~s~Ki~l~~~p~-------~~~~~~~KLsFk~GGa- 121 (145)
T 2cay_A 51 QRGRIFLTSQRIIYIDDAKPTQNSLGLELDDLAYVNYSSGFL-TRSPRLILFFKDP-------SSSTEFVQLSFRKSDG- 121 (145)
T ss_dssp SSEEEEEESSEEEEEESSCHHHHCEEEEGGGEEEEEEECSSS-SSSCEEEEEESSC-------SSTTCCEEEEESSSCC-
T ss_pred CccEEEEEcCeEEEecCCCCcceEEEeEhHheeeeeEEcCcc-ccCceEEEEecCC-------CCCceEEEEEEcCCCc-
Confidence 349999999999997654332368999999999999987653 3344444321110 1223456777777555
Q ss_pred HHHHHHHHHHHHh
Q 011161 271 NHALRQLQRTAKN 283 (492)
Q Consensus 271 d~~~~~l~~~~~~ 283 (492)
++-+..|.+++++
T Consensus 122 ~eF~~~l~~al~~ 134 (145)
T 2cay_A 122 VLFSQATERALEN 134 (145)
T ss_dssp HHHHHHHHHHHHH
T ss_pred hHHHHHHHHHHHH
Confidence 6677777776655
No 54
>1zsq_A Myotubularin-related protein 2; protein-phospholipid complex, hydrolase; HET: PIB; 1.82A {Homo sapiens} SCOP: b.55.1.8 c.45.1.3 PDB: 1zvr_A*
Probab=87.46 E-value=3.9 Score=42.77 Aligned_cols=54 Identities=15% Similarity=0.233 Sum_probs=41.1
Q ss_pred ccceEEEEecCeeEEEeccCCceeEEEEeccceeeEeecccc---cccC-cEEEEEec
Q 011161 190 LYHGRMYVSAWHICFHSNAFSRQMKVIIPIGDIDEIQRSQHA---FINP-AITIILRM 243 (492)
Q Consensus 190 ~~~G~lyis~~~~cF~s~~~g~~~~~~i~~~~I~~i~k~~~~---~~~~-~i~i~~~~ 243 (492)
.+.|.||+|+.++.|.+..-...-.+-||+.-|..|+|.... .-.+ .|.|.+++
T Consensus 31 ~~~GtL~lTn~rLiF~~~~~~~~~~~~iPL~~I~~vek~~~~s~~~~~~~~l~I~CKD 88 (528)
T 1zsq_A 31 AVRGTLTVTNYRLYFKSMERDPPFVLDASLGVINRVEKIGGASSRGENSYGLETVCKD 88 (528)
T ss_dssp EEEEEEEEESSEEEEEESSSSSCEEEEEEGGGEEEEEEECCTTCCSTTCSEEEEEETT
T ss_pred ceeEEEEEECCEEEEEccCCCccEEEEeeccceEEEEEcCCCCcCCCCCceEEEEccC
Confidence 577999999999999986433345688999999999997531 1123 68898865
No 55
>2yf0_A Myotubularin-related protein 6; hydrolase; 2.65A {Homo sapiens}
Probab=86.79 E-value=1.9 Score=44.84 Aligned_cols=53 Identities=17% Similarity=0.171 Sum_probs=39.5
Q ss_pred cccceEEEEecCeeEEEeccCCceeEEEEeccceeeEeecccccccCcEEEEEecC
Q 011161 189 FLYHGRMYVSAWHICFHSNAFSRQMKVIIPIGDIDEIQRSQHAFINPAITIILRMG 244 (492)
Q Consensus 189 ~~~~G~lyis~~~~cF~s~~~g~~~~~~i~~~~I~~i~k~~~~~~~~~i~i~~~~g 244 (492)
-...|.||+|+.++.|.+. ....+-||+.-|..|+|.+...-...|.|.+++-
T Consensus 23 ~~~~GtL~lTn~~LiF~~~---~~~e~wi~~~~I~~VeK~~~~~~~~~l~I~CKDf 75 (512)
T 2yf0_A 23 KSLTGTLYLTATHLLFIDS---HQKETWILHHHIASVEKLALTTSGCPLVIQCKNF 75 (512)
T ss_dssp -CCEEEEEECSSEEEEEES---SSCEEEEEGGGEEEEEECCCBTTBEEEEEEETTS
T ss_pred CceeEEEEEECCEEEEeCC---CCCceEecccceeEEEEecCCCCCceEEEEecCC
Confidence 4567999999999999983 2345789999999999976432122588888653
No 56
>1lw3_A Myotubularin-related protein 2; protein-phosphate complex, hydrolase; 2.30A {Homo sapiens} SCOP: b.55.1.8 c.45.1.3 PDB: 1m7r_A
Probab=85.76 E-value=5.2 Score=42.79 Aligned_cols=74 Identities=18% Similarity=0.184 Sum_probs=48.8
Q ss_pred ecCCcceeEEeeeee-eec--ccccceEEEEecCeeEEEeccCCceeEEEEeccceeeEeecccc---cccC-cEEEEEe
Q 011161 170 NLLPDEFVELSYSCV-IER--SFLYHGRMYVSAWHICFHSNAFSRQMKVIIPIGDIDEIQRSQHA---FINP-AITIILR 242 (492)
Q Consensus 170 ~lp~~e~l~~~~~c~-l~~--~~~~~G~lyis~~~~cF~s~~~g~~~~~~i~~~~I~~i~k~~~~---~~~~-~i~i~~~ 242 (492)
.+-++|.++...... +.. .-.+.|.||+|+.++.|.+..-...-.+-||+.-|..|+|.... .-.+ .|.|.++
T Consensus 80 ~LLPGE~v~~~~~~V~~~~p~~~~~~GtL~lTnyrLiF~~~~~~~~~~~~IPL~~I~~Iekv~g~s~~g~~~~~l~I~CK 159 (657)
T 1lw3_A 80 PLLPGENIKDMAKDVTYICPFTGAVRGTLTVTNYRLYFKSMERDPPFVLDASLGVINRVEKIGGASSRGENSYGLETVCK 159 (657)
T ss_dssp CCCTTCCEEEEEEEEEEEETTTEEEEEEEEEESSEEEEEESSSSSCEEEEEEGGGEEEEEEECCTTCCSTTCSEEEEEET
T ss_pred ccCCCeeEEEEeCCEEEecCCCCceeEEEEEECCEEEEEecCCCcceEEEecccceEEEEecCCCcccCCCCceEEEEec
Confidence 345666666433221 111 23577999999999999986433345678999999999996521 1123 6888886
Q ss_pred c
Q 011161 243 M 243 (492)
Q Consensus 243 ~ 243 (492)
+
T Consensus 160 D 160 (657)
T 1lw3_A 160 D 160 (657)
T ss_dssp T
T ss_pred C
Confidence 5
No 57
>3l4c_A Dedicator of cytokinesis protein 1; DOCK180, DOCK1, phosphoinositide specificity, guanine exchan factor, RHO GTPase, cytoskeleton, cell migration; 2.37A {Homo sapiens}
Probab=83.61 E-value=19 Score=32.99 Aligned_cols=55 Identities=11% Similarity=0.061 Sum_probs=40.2
Q ss_pred eeeeccCCCCCCeeccEEEEEeeC---CCcEEEEEEEEcCCC----CCCceeEEEEEEcccC
Q 011161 48 RFSSMVPGSRYPMWGEEFNFSVDE---LPVQIIVTIYDWDII----WKSTVLGSVIVTVESE 102 (492)
Q Consensus 48 ~~T~~~~~t~nP~W~e~f~f~i~~---~~~~L~i~v~d~d~~----~~dd~IG~~~i~l~~l 102 (492)
.+|-+.+.+.+|.|+|++.+.++. ....|.|++++...- ..+..+|.+.+||..-
T Consensus 79 ~~S~V~YHnk~P~w~EtIKi~LP~~~~~~~HLlFtFrH~S~~~k~dk~E~pfg~a~lPL~~~ 140 (220)
T 3l4c_A 79 YKSVIYYQVKQPRWFETVKVAIPIEDVNRSHLRFTFRHRSSQDSKDKSEKIFALAFVKLMRY 140 (220)
T ss_dssp EECCCCTTCSSCCCCEEEEEEECTTSSTTEEEEEEEEECCCCSSCCCCCCEEEEEEEESBCT
T ss_pred EEEEEEEcCCCCCceEeEEEeeChhhcCCeEEEEEEEEecccccccccCCeeEEEEEEcccC
Confidence 467788889999999999999853 345699999874421 1234678888887654
No 58
>1pfj_A TFIIH basal transcription factor complex P62 subunit; PH/PTB domain, structural proteomics in europe, spine, structural genomics; NMR {Homo sapiens} SCOP: b.55.1.9 PDB: 2rnr_B
Probab=83.31 E-value=6.7 Score=31.73 Aligned_cols=92 Identities=15% Similarity=0.251 Sum_probs=60.5
Q ss_pred CcceeEEeeeeeeecccccceEEEEecCeeEEEeccCCceeEEEEeccceeeEeecccccccC--cEEEEEecCCCCCCC
Q 011161 173 PDEFVELSYSCVIERSFLYHGRMYVSAWHICFHSNAFSRQMKVIIPIGDIDEIQRSQHAFINP--AITIILRMGAGGHGV 250 (492)
Q Consensus 173 ~~e~l~~~~~c~l~~~~~~~G~lyis~~~~cF~s~~~g~~~~~~i~~~~I~~i~k~~~~~~~~--~i~i~~~~g~~~~~~ 250 (492)
.+|.|+......+.+.- |.||++..++-+-.+- +..-.+++++.+|...+-.+.. -+ -+.|+.+.|
T Consensus 5 ~~~~ll~v~~v~yKK~d---GtL~l~~d~i~W~p~~-~~~~~vs~~~~~I~~qq~SP~~--k~KVqLqi~l~~~------ 72 (108)
T 1pfj_A 5 SEEVLLIVKKVRQKKQD---GALYLMAERIAWAPEG-KDRFTISHMYADIKCQKISPEG--KAKIQLQLVLHAG------ 72 (108)
T ss_dssp SCCEEEEESCCBCSSCB---CEEEEETTEEEEECSS-SSSCSEEEETTTCCCEEECCSS--SSSCEEEEECSSS------
T ss_pred chheeEEehhheeecCC---ceEEEEcceEEEccCC-CCCceEEEehhhhhcceeCCCC--CccEEEEEEEeCC------
Confidence 34566665555555532 9999999999987744 3456678899999987766633 12 578887643
Q ss_pred CCCCCCCCceeEEEeeec----chHHHHHHHHHHHHh
Q 011161 251 PPLGSPDGRVRYKFASFW----NRNHALRQLQRTAKN 283 (492)
Q Consensus 251 ~~~~~~~~~~~~~f~sf~----~rd~~~~~l~~~~~~ 283 (492)
+...|.|++-. .||..=++|.+++..
T Consensus 73 -------~~~~F~Ftn~~~a~~erd~VKd~L~~~l~~ 102 (108)
T 1pfj_A 73 -------DTTNFHFSNESTAVKERDAVKDLLQQLLPK 102 (108)
T ss_dssp -------CEEEEECCCSSCTTHHHHHHHHHHHHHHHH
T ss_pred -------CceEEEEcCcHHHHHHHHHHHHHHHHHHHH
Confidence 45678888843 244545566665543
No 59
>2wxf_A Phosphatidylinositol-4,5-bisphosphate 3-kinase Ca subunit delta isoform; transferase, phosphoprotein, isoform-specific inhibitors; HET: 039; 1.90A {Mus musculus} PDB: 2wxg_A* 2wxh_A* 2wxi_A* 2wxj_A* 2wxk_A* 2wxl_A* 2wxm_A* 2wxn_A* 2wxo_A* 2wxp_A* 2wxq_A* 2wxr_A 2x38_A*
Probab=78.63 E-value=16 Score=41.03 Aligned_cols=87 Identities=14% Similarity=0.168 Sum_probs=57.3
Q ss_pred ceEEEEEEEEeecCCCCCCCCCCCcEEEEEE--CCe----eeeeeccCCCCCCeeccEEEEEee--CC--CcEEEEEEEE
Q 011161 13 AYLIKLELLAAKNLIGANLNGTSDPYAIITC--GSE----KRFSSMVPGSRYPMWGEEFNFSVD--EL--PVQIIVTIYD 82 (492)
Q Consensus 13 ~~~L~V~Vi~a~~L~~~d~~g~sDPyv~v~~--~~~----~~~T~~~~~t~nP~W~e~f~f~i~--~~--~~~L~i~v~d 82 (492)
...+.|+|.++.++... ...+-||.+.+ ++. ...|..+.-..+|.|||.+.|.+. +. ...|.|+||+
T Consensus 216 ~~~f~i~i~~~~~~~~~---~~~~~~V~~~l~~g~~~l~~~~~T~~~~~~~~~~Wne~l~f~i~i~dLPr~a~L~~ti~~ 292 (940)
T 2wxf_A 216 EQPFSIELIEGRKVNAD---ERMKLVVQAGLFHGNEMLCKTVSSSEVNVCSEPVWKQRLEFDISVCDLPRMARLCFALYA 292 (940)
T ss_dssp CSEEEEEEEEEECCCC------CEEEEEEEEEETTEESSCCEECCCEESCSSCEEEEEEEEEEEGGGCCTTCEEEEEEEE
T ss_pred CCceEEEEEEecccCCC---CCceEEEEEEEEECCEEccCceecccccCCCCcccceEEEcccccccCCcccEEEEEEEE
Confidence 34688999999998643 34677777654 433 224444444678999999998873 32 4569999999
Q ss_pred cCCC--C----------CCceeEEEEEEcccC
Q 011161 83 WDII--W----------KSTVLGSVIVTVESE 102 (492)
Q Consensus 83 ~d~~--~----------~dd~IG~~~i~l~~l 102 (492)
.... + .+..||.+.+++-+.
T Consensus 293 ~~~~~~~~~~~~~~~~~~~~~lg~~~~~lFd~ 324 (940)
T 2wxf_A 293 VVEKAKKARSTKKKSKKADCPIAWANLMLFDY 324 (940)
T ss_dssp EC----------------CEEEEEEEEESBCT
T ss_pred ecCCccCccccccccccccceEEEEeeeEECC
Confidence 6432 1 245889888888775
No 60
>1em2_A MLN64 protein; beta barrel, lipid binding protein; HET: TAR; 2.20A {Homo sapiens} SCOP: d.129.3.2
Probab=71.54 E-value=41 Score=30.41 Aligned_cols=78 Identities=9% Similarity=-0.002 Sum_probs=50.8
Q ss_pred CCCeEEEEEEEecCCCCCC-CeEEE---EEEEEEEeeC--CCceEEEEEEeeeeEEEeccceeehheehhHHHhHHHHHH
Q 011161 386 DKKIFVFETVQQAHDVPFG-SYFEI---HGRWHLETIA--ENSSTIDIKVVSAGAHFKKWCVIQFKIKTGAVNKYKKEVE 459 (492)
Q Consensus 386 ~~~~~vi~~~~~~~dVPyg-d~F~v---~~r~~~~~~~--~~~c~l~v~~~~~~V~~~K~t~~K~~Iek~~~~~~~~~~~ 459 (492)
++..+++.....-+.+|-. ++=++ .+.|.|++.+ ++.|+|... +.++..++ +=+.++++.+...+.+.++
T Consensus 142 ~~~~vi~~~Sv~~~~~P~~~~~VR~~~~~~g~~i~p~~~~~~~t~vt~~---~~~Dp~G~-iP~~l~n~~~~~~~~~~~~ 217 (229)
T 1em2_A 142 RDRYLSSGIATSHSAKPPTHKYVRGENGPGGMIVLKSASNPRVCTFVWI---LNTDLKGR-LPRYLIHQSLAATMFEFAF 217 (229)
T ss_dssp SSEEEEEEEECCCTTSCCCTTSEECEECSEEEEEEECSSCTTCEEEEEE---ECEECCSS-SCHHHHHHHHHHHHHHHHH
T ss_pred CCEEEEEEecccCCCCCCCCCCEeeeecccEEEEEecCCCCCcEEEEEE---EEECCCCC-CCHHHHHHHHHHHHHHHHH
Confidence 3345566666667778855 33333 3679999865 578999988 89998885 3355666666666666655
Q ss_pred HHHHHHHH
Q 011161 460 LMLETARS 467 (492)
Q Consensus 460 ~~~~~~~~ 467 (492)
.|-+.+++
T Consensus 218 ~Lr~~~~~ 225 (229)
T 1em2_A 218 HLRQRISE 225 (229)
T ss_dssp HHHHHHHH
T ss_pred HHHHHHHH
Confidence 55444443
No 61
>3hhm_A Phosphatidylinositol-4,5-bisphosphate 3-kinase catalytic subunit alpha isoform; PI3KCA, PI3K, PIK3R1, phosphatidilynositol 3,4,5- triphosphate, wortmannin, H1047R, ATP-binding, disease mutation, kinase; HET: KWT; 2.80A {Homo sapiens} PDB: 3hiz_A 2rd0_A 4a55_A* 2enq_A
Probab=67.94 E-value=35 Score=38.72 Aligned_cols=87 Identities=16% Similarity=0.218 Sum_probs=56.9
Q ss_pred eEEEEEEEEeecCCCCCCCCCCCcEEEEEE--CCe----eeeeeccCCCCCCeeccEEEEEee--C--CCcEEEEEEEEc
Q 011161 14 YLIKLELLAAKNLIGANLNGTSDPYAIITC--GSE----KRFSSMVPGSRYPMWGEEFNFSVD--E--LPVQIIVTIYDW 83 (492)
Q Consensus 14 ~~L~V~Vi~a~~L~~~d~~g~sDPyv~v~~--~~~----~~~T~~~~~t~nP~W~e~f~f~i~--~--~~~~L~i~v~d~ 83 (492)
..+.|+|+.+.++.. +.....+-||.+.+ +++ ...|..+. ..+|.|||...|.+. + ....|.|+||+.
T Consensus 355 ~~f~v~i~~~~~~n~-~~~~~~~~~V~~~l~hG~~~L~~~~~T~~~~-~~~~~Wne~l~f~i~i~dLPr~arL~~tl~~~ 432 (1091)
T 3hhm_A 355 SALRIKILCATYVNV-NIRDIDKIYVRTGIYHGGEPLCDNVNTQRVP-CSNPRWNEWLNYDIYIPDLPRAARLCLSICSV 432 (1091)
T ss_dssp SEEEEEEEEESCCCC-CCSSCCCCCEEEEEESSSCSSCCEECCCCCC-TTSCEEEEEEEEEEEGGGCCTTCEEEEEECCC
T ss_pred CCEEEEEEEecCCCC-CccccceEEEEEEEEECCEEccCceeccccC-CCCCCCCeeEEecCccccCChhcEEEEEEEEe
Confidence 367899999988753 32334677887765 332 22343333 457889999999873 3 245699999986
Q ss_pred CCC----CCCceeEEEEEEcccC
Q 011161 84 DII----WKSTVLGSVIVTVESE 102 (492)
Q Consensus 84 d~~----~~dd~IG~~~i~l~~l 102 (492)
... ..+..||.+.++|-+.
T Consensus 433 ~~~~~~~~~~~~lg~~n~~lfd~ 455 (1091)
T 3hhm_A 433 KGRKGAKEEHCPLAWGNINLFDY 455 (1091)
T ss_dssp CCCC-------CCEEEEEESBCT
T ss_pred cCccCcccccceeEEeeeeeEcc
Confidence 542 1245799999998876
No 62
>1t77_A Lipopolysaccharide-responsive and beige-like anchor protein, CDC4-like protein; PH-beach domains, vesicle trafficking, signal transduction; 2.40A {Homo sapiens} SCOP: a.169.1.1 b.55.1.6 PDB: 1mi1_A
Probab=66.41 E-value=11 Score=37.86 Aligned_cols=67 Identities=18% Similarity=0.251 Sum_probs=47.4
Q ss_pred eEEeeeeeeec-ccccceEEEEecCeeEEEecc----CC----------ceeEEEEeccceeeEeecccccccC-cEEEE
Q 011161 177 VELSYSCVIER-SFLYHGRMYVSAWHICFHSNA----FS----------RQMKVIIPIGDIDEIQRSQHAFINP-AITII 240 (492)
Q Consensus 177 l~~~~~c~l~~-~~~~~G~lyis~~~~cF~s~~----~g----------~~~~~~i~~~~I~~i~k~~~~~~~~-~i~i~ 240 (492)
++-.+.|.+.. .....|++.|+...+.|.... |. ......+++++|..|-+..-. +-+ ||+|.
T Consensus 3 v~~~~~~~~i~p~~~~~G~l~it~~~iyF~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~I~~i~~Rryl-l~~~alEif 81 (414)
T 1t77_A 3 VSLSTPAQLVAPSVVVKGTLSVTSSELYFEVDEEDPNFKKIDPKILAYTEGLHGKWLFTEIRSIFSRRYL-LQNTALEIF 81 (414)
T ss_dssp CSEEEEEEEECSSCEEEEEEEECSSEEEEEECTTCHHHHHSCHHHHHHCCCTTCEEEGGGEEEEEEEEET-TEEEEEEEE
T ss_pred EEEEEEEEEEeeecceeeEEEEeCCEEEEEeCCCcccccccccchhccccCcceEecchheeeeeeeecc-CcceeEEEE
Confidence 34456788776 666779999999999999631 10 001236899999999886643 234 99999
Q ss_pred EecC
Q 011161 241 LRMG 244 (492)
Q Consensus 241 ~~~g 244 (492)
+.+|
T Consensus 82 ~~~g 85 (414)
T 1t77_A 82 MANR 85 (414)
T ss_dssp ETTS
T ss_pred EcCC
Confidence 9764
No 63
>2r55_A STAR-related lipid transfer protein 5; alpha and beta protein, cholesterol binding, structural GENO structural genomics consortium, SGC; 2.50A {Homo sapiens}
Probab=61.53 E-value=92 Score=27.99 Aligned_cols=80 Identities=8% Similarity=-0.051 Sum_probs=50.7
Q ss_pred ecCCCCeEEEEEEEecCCCCCC-CeEEEE---EEEEEEeeC--CCceEEEEEEeeeeEEEeccceeehheehhHHHhHHH
Q 011161 383 LSPDKKIFVFETVQQAHDVPFG-SYFEIH---GRWHLETIA--ENSSTIDIKVVSAGAHFKKWCVIQFKIKTGAVNKYKK 456 (492)
Q Consensus 383 ~~~~~~~~vi~~~~~~~dVPyg-d~F~v~---~r~~~~~~~--~~~c~l~v~~~~~~V~~~K~t~~K~~Iek~~~~~~~~ 456 (492)
...++..+++......+++|-. ++-+++ +.|.|...+ +++|+|... ..++..++. =+.++.+.+..++..
T Consensus 142 ~~~~g~~vi~~~Sv~~~~~P~~~~~VR~~~~~~g~~i~p~~~~~~~t~vt~~---~~~Dp~G~i-P~~lvn~~~~~~~~~ 217 (231)
T 2r55_A 142 RYEDGTISSNATHVEHPLCPPKPGFVRGFNHPCGCFCEPLPGEPTKTNLVTF---FHTDLSGYL-PQNVVDSFFPRSMTR 217 (231)
T ss_dssp ECTTSCEEEEEEECCCTTSCCCTTCEEEEECSEEEEEEECC--CCCEEEEEE---ECEECCSSC-CHHHHHHHHHHHHHH
T ss_pred EcCCCEEEEEEEeccCCCCCCCCCCEEEEEEeeEEEEEEeCCCCCcEEEEEE---EEeCCCCCc-cHHHHHHHHhHhHHH
Confidence 3345444556666667788754 444444 458899875 578999998 899987753 255666665555555
Q ss_pred HHHHHHHHHH
Q 011161 457 EVELMLETAR 466 (492)
Q Consensus 457 ~~~~~~~~~~ 466 (492)
.++.|-+.++
T Consensus 218 ~~~~Lr~~~~ 227 (231)
T 2r55_A 218 FYANLQKAVK 227 (231)
T ss_dssp HHHHHHHHHH
T ss_pred HHHHHHHHHH
Confidence 5555544443
No 64
>1ln1_A PC-TP, phosphatidylcholine transfer protein; start domain, lipid binding protein; HET: DLP; 2.40A {Homo sapiens} SCOP: d.129.3.2 PDB: 1ln2_A* 1ln3_A*
Probab=60.99 E-value=77 Score=28.01 Aligned_cols=73 Identities=10% Similarity=-0.032 Sum_probs=45.5
Q ss_pred EEEEEEEecCCCCCCCeE----EEEEEEEEEeeCCCceEEEEEEeeeeEEEeccceeehheehhHHHhHHHHHHHHHHHH
Q 011161 390 FVFETVQQAHDVPFGSYF----EIHGRWHLETIAENSSTIDIKVVSAGAHFKKWCVIQFKIKTGAVNKYKKEVELMLETA 465 (492)
Q Consensus 390 ~vi~~~~~~~dVPygd~F----~v~~r~~~~~~~~~~c~l~v~~~~~~V~~~K~t~~K~~Iek~~~~~~~~~~~~~~~~~ 465 (492)
+++......+++|-...| ...+.|+|++.++++|++... ..++..++. =+.++.+.+.......++.|-+.+
T Consensus 132 ~i~~~Sv~~p~~P~~~~~VR~~~~~~~~~i~p~~~~~t~v~~~---~~~Dp~G~i-P~~l~n~~~~~~~~~~l~~l~k~~ 207 (214)
T 1ln1_A 132 VILARSTSMPQLGERSGVIRVKQYKQSLAIESDGKKGSKVFMY---YFDNPGGQI-PSWLINWAAKNGVPNFLKDMARAC 207 (214)
T ss_dssp EEEEEECCBTTBCCCTTSEEECCEEEEEEEEECSSSSEEEEEE---EEECCSSCC-CHHHHHHHHHTHHHHHHHHHHHHH
T ss_pred EEEEecccCCCCCCCCCcEEEEEEEEEEEEecCCCCceEEEEE---EEECCCCcc-cHHHHHHHHHHHhHHHHHHHHHHH
Confidence 345556666778864333 256779999988899999999 888887532 233444444444444444444444
Q ss_pred H
Q 011161 466 R 466 (492)
Q Consensus 466 ~ 466 (492)
+
T Consensus 208 ~ 208 (214)
T 1ln1_A 208 Q 208 (214)
T ss_dssp H
T ss_pred H
Confidence 3
No 65
>1e7u_A Phosphatidylinositol 3-kinase catalytic subunit; phosphoinositide 3-kinase gamma, secondary messenger generation, PI3K, PI 3K, wortmannin; HET: KWT; 2.0A {Sus scrofa} SCOP: a.118.1.6 b.7.1.1 d.15.1.5 d.144.1.4 PDB: 1e8x_A* 1e8w_A* 1e7v_A* 1e90_A* 3l54_A* 3s2a_A* 3qaq_A* 3qjz_A* 3qk0_A* 3qar_A* 3apc_A* 3apd_A* 3apf_A* 3dbs_A* 3l13_A* 3r7q_A* 3cst_A* 3csf_A* 3l16_A* 3l17_A* ...
Probab=60.63 E-value=61 Score=36.41 Aligned_cols=88 Identities=15% Similarity=0.143 Sum_probs=52.9
Q ss_pred eEEEEEEEEeecCCCCCCCCCCCcEEEEEE--CCee---eeeeccCCCCCCeeccEEEEEee--CC--CcEEEEEEEEcC
Q 011161 14 YLIKLELLAAKNLIGANLNGTSDPYAIITC--GSEK---RFSSMVPGSRYPMWGEEFNFSVD--EL--PVQIIVTIYDWD 84 (492)
Q Consensus 14 ~~L~V~Vi~a~~L~~~d~~g~sDPyv~v~~--~~~~---~~T~~~~~t~nP~W~e~f~f~i~--~~--~~~L~i~v~d~d 84 (492)
..+.|.|+.+....... +...+-||.+.+ ++.. .+|..+.-+.+|.|||.+.|.+. +. ...|.|+||+..
T Consensus 218 ~~f~i~i~~~~~~~~~~-~~~~~~~V~~~l~~G~~~l~~~~t~~~~~~~~~~Wne~l~f~i~i~dLPr~a~L~~ti~~~~ 296 (961)
T 1e7u_A 218 RKFRVKIRGIDIPVLPR-TADLTVFVEANIQYGQQVLCQRRTSPKPFTEEVLWNVWLEFSIKIKDLPKGALLNLQIYCGA 296 (961)
T ss_dssp SEEEEEEEEEECSSCCT-TSCEEEEEEEEEEETTEEEEEEECCCEECCSEEEEEEEEEEEEEGGGCCTTCEEEEEEEEEE
T ss_pred CceEEEEeecccccccC-CCCceEEEEEEEEECCEEcccceeeccccCCCcccceeEEeccccccCCcccEEEEEEEecc
Confidence 35778888876522111 234566776553 4432 23444444567999999888763 32 456999999854
Q ss_pred CCC----------------CCceeEEEEEEcccC
Q 011161 85 IIW----------------KSTVLGSVIVTVESE 102 (492)
Q Consensus 85 ~~~----------------~dd~IG~~~i~l~~l 102 (492)
..+ +...||.+.++|-+.
T Consensus 297 ~~~~~~~~~~~~~~~~~~~~~~~lg~~n~~lfd~ 330 (961)
T 1e7u_A 297 KPALSGKTSAEMPSPESKGKAQLLYYVNLLLIDH 330 (961)
T ss_dssp C--------------------CEEEEEEEESBCT
T ss_pred cCccccccccccccccccccceeEEEEeeeeecC
Confidence 321 234788888887765
No 66
>2pcs_A Conserved protein; structural genomics, unknown function, ligand binding, PSI-2 structure initiative; HET: UNL; 2.40A {Geobacillus kaustophilus} SCOP: d.129.3.10
Probab=57.91 E-value=82 Score=26.25 Aligned_cols=73 Identities=11% Similarity=0.052 Sum_probs=42.8
Q ss_pred CeEEEEEEEecCCCCCCCeEEEEEEEEEEeeCCCceEEEEEEeeeeEEEecc--ceeehheehhHHHhHHHHHHHHHHHH
Q 011161 388 KIFVFETVQQAHDVPFGSYFEIHGRWHLETIAENSSTIDIKVVSAGAHFKKW--CVIQFKIKTGAVNKYKKEVELMLETA 465 (492)
Q Consensus 388 ~~~vi~~~~~~~dVPygd~F~v~~r~~~~~~~~~~c~l~v~~~~~~V~~~K~--t~~K~~Iek~~~~~~~~~~~~~~~~~ 465 (492)
..+.+.-... +. +..+.....|.|+..++++|+|.+. ..+.+... .+...++.+-+ +...+.+++.+
T Consensus 74 ~~~~~~~~~~--~~--~~~~~~~~~~~l~~~~~~gT~v~~~---~~~~~~g~l~~~~~~l~~~~~----~~~~~~~~~~l 142 (162)
T 2pcs_A 74 YHYKLLVNGE--GG--PGFVNAEGVIDLTPINDECTQLTYT---YSAEVGGKVAAIGQRMLGGVA----KLLISDFFKKI 142 (162)
T ss_dssp TEEEEEEEEE--ET--TEEEEEEEEEEEEESSSSEEEEEEE---EEEEEESGGGGGCHHHHHHHH----HHHHHHHHHHH
T ss_pred cEEEEEEEec--CC--CccEEEEEEEEEEecCCCcEEEEEE---EEEEECCCHHHhhHHHHHHHH----HHHHHHHHHHH
Confidence 4666644333 11 3345678889998866778999998 88887653 23333333322 33345555556
Q ss_pred HHHHhh
Q 011161 466 RSYIKI 471 (492)
Q Consensus 466 ~~~~~~ 471 (492)
++.+.+
T Consensus 143 k~~~e~ 148 (162)
T 2pcs_A 143 QKEIAK 148 (162)
T ss_dssp HHHHHH
T ss_pred HHHhcc
Confidence 666554
No 67
>3p0l_A Steroidogenic acute regulatory protein, mitochond; structural genomics consortium, SGC, start domain, cholester transport, cholesterol; 3.40A {Homo sapiens}
Probab=56.12 E-value=82 Score=28.17 Aligned_cols=77 Identities=9% Similarity=0.093 Sum_probs=49.7
Q ss_pred CCCeEEEEEEEecCCCCC-CCeEEE---EEEEEEEeeCCC--ceEEEEEEeeeeEEEeccceeehheehhHHHhHHHHHH
Q 011161 386 DKKIFVFETVQQAHDVPF-GSYFEI---HGRWHLETIAEN--SSTIDIKVVSAGAHFKKWCVIQFKIKTGAVNKYKKEVE 459 (492)
Q Consensus 386 ~~~~~vi~~~~~~~dVPy-gd~F~v---~~r~~~~~~~~~--~c~l~v~~~~~~V~~~K~t~~K~~Iek~~~~~~~~~~~ 459 (492)
++..+++......+.+|- .++-++ .+.|.|++.+++ +|+|... ..++..++ +=+.++.+.+...+-+
T Consensus 131 ~~~~vi~~~Sv~~~~~P~~~g~VR~~~~~~g~~i~p~~~~~~~t~vt~~---~~~Dp~G~-iP~~lvn~~~~~~~~~--- 203 (221)
T 3p0l_A 131 GSTCVLAGMATDFGNMPEQKGVIRAEHGPTCMVLHPLAGSPSKTKLTWL---LSIDLKGW-LPKSIINQVLSQTQVD--- 203 (221)
T ss_dssp SSCEEECCEECCCTTSCCCTTSEECEECSCEEEEEEETTEEEEEEEEEE---ECEECCSS-CCHHHHHHHHHHHHHH---
T ss_pred CCeEEEEEEeccCCCCCCCCCeEEEeccceEEEEEECCCCCCcEEEEEE---EEecCCCC-CCHHHHHHHHHHHHHH---
Confidence 444555556666677776 444444 367999999865 8999998 89998776 3355555555555544
Q ss_pred HHHHHHHHHHh
Q 011161 460 LMLETARSYIK 470 (492)
Q Consensus 460 ~~~~~~~~~~~ 470 (492)
+++.+++.++
T Consensus 204 -~~~~Lr~~~~ 213 (221)
T 3p0l_A 204 -FANHLRKRLE 213 (221)
T ss_dssp -HHHHHHHHTC
T ss_pred -HHHHHHHHHh
Confidence 4444456555
No 68
>2wql_A Major allergen DAU C 1; pathogenesis-related protein, plant defense; HET: P4C; 2.70A {Daucus carota} PDB: 2bk0_A
Probab=55.78 E-value=96 Score=26.40 Aligned_cols=105 Identities=12% Similarity=0.127 Sum_probs=63.1
Q ss_pred CCeeEEEEEEEecCCCCCCCceeEeEEEEEEecCCCCeEEEEEEEecCCCCCCCeEEEEEEEEEEeeCCCceEEEEEEee
Q 011161 352 DGQVREVAFRSLCKSPIYPRDTAMTESQHAVLSPDKKIFVFETVQQAHDVPFGSYFEIHGRWHLETIAENSSTIDIKVVS 431 (492)
Q Consensus 352 ~~~~R~~~y~~~~~~~~gp~~t~~~~~q~~~~~~~~~~~vi~~~~~~~dVPygd~F~v~~r~~~~~~~~~~c~l~v~~~~ 431 (492)
.|..|.++|.. -||.. +..+++...++... .+.-+..=-|+.-..+=+......+...++.+|.+...
T Consensus 50 ~Gsir~~t~~~-----g~~~~---~~kErle~iD~~~~-~~~y~iieGd~l~~~~~~~~~~ikv~p~~~ggsvvk~t--- 117 (154)
T 2wql_A 50 AGTVRIITLPE-----GSPIT---TMTVRTDAVNKEAL-SYDSTVIDGDILLGFIESIETHMVVVPTADGGSITKTT--- 117 (154)
T ss_dssp TTCEEEEECCT-----TCSCC---EEEEEEEEEETTTT-EEEEEEEESGGGTTTEEEEEEEEEEEECTTSCEEEEEE---
T ss_pred CCeEEEEEEcC-----CCCce---EEEEEEEEEehhhC-EEEEEEEeccccccceEEEEEEEEEeeCCCCcEEEEEE---
Confidence 47789999844 24422 35677775544333 33322332455444455556777788888888876655
Q ss_pred eeEEEeccceeehheehhHHHhHHHHHHHHHHHHHHHHhhc
Q 011161 432 AGAHFKKWCVIQFKIKTGAVNKYKKEVELMLETARSYIKIC 472 (492)
Q Consensus 432 ~~V~~~K~t~~K~~Iek~~~~~~~~~~~~~~~~~~~~~~~~ 472 (492)
+.|.+..= ..+.-....+.++.+..+++.++.||.+|
T Consensus 118 --~~Y~~~~~--~~~~ee~~~~~~~~~~~~~KaiEayLlan 154 (154)
T 2wql_A 118 --AIFHTKGD--AVVPEENIKFADAQNTALFKAIEAYLIAN 154 (154)
T ss_dssp --EEEEESTT--CCCCHHHHHHHHHHHHHHHHHHHHHHHHC
T ss_pred --EEEEECCC--CCCCHHHHHHHHHHHHhHHHHHHHHHhcC
Confidence 55665321 12333444555666788899999998765
No 69
>3p9v_A Uncharacterized protein; structural genomics, PSI-biology, protein structure initiati northeast structural genomics consortium, NESG; 1.78A {Marinobacter aquaeolei}
Probab=54.01 E-value=59 Score=27.55 Aligned_cols=59 Identities=17% Similarity=0.302 Sum_probs=37.1
Q ss_pred EEEEEEEEEeeCCCceEEEEEEeeeeEEEeccceeehheehhHHHhHHHHHHHHHHHHHHHHhh
Q 011161 408 EIHGRWHLETIAENSSTIDIKVVSAGAHFKKWCVIQFKIKTGAVNKYKKEVELMLETARSYIKI 471 (492)
Q Consensus 408 ~v~~r~~~~~~~~~~c~l~v~~~~~~V~~~K~t~~K~~Iek~~~~~~~~~~~~~~~~~~~~~~~ 471 (492)
...++|.|+..++++|+|... +..++... +.+++++-.-.-....++.+++...+.++.
T Consensus 93 ~l~g~w~f~p~~~g~t~V~~~---~~~e~~~p--l~~ll~~~~~~~~~~~~~~~v~af~~ra~~ 151 (161)
T 3p9v_A 93 VVSGSWTLSAKGDNATAVKFQ---TSAELTVP--LPSLLKLAISPVIKHEFNSLVDTYMANLKK 151 (161)
T ss_dssp EEEEEEEEEESSSSCEEEEEE---EEEEEEEC--SCGGGHHHHHHHHHHHHHHHHHHHHHHHHT
T ss_pred eEEEEEEEEECCCCeEEEEEE---EEEEEcCc--chHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 667899999998888999998 88887631 223333333333444555555555554443
No 70
>3qsz_A STAR-related lipid transfer protein; structural genomics, PSI-biology; 2.39A {Xanthomonas axonopodis PV}
Probab=51.15 E-value=87 Score=27.05 Aligned_cols=77 Identities=10% Similarity=0.110 Sum_probs=47.2
Q ss_pred cCCCCeEEEEEEEecCCCCCCCe----EEEEEEEEEEeeCCCceEEEEEEeeeeEEEeccceeehheehhHHHhHHHHHH
Q 011161 384 SPDKKIFVFETVQQAHDVPFGSY----FEIHGRWHLETIAENSSTIDIKVVSAGAHFKKWCVIQFKIKTGAVNKYKKEVE 459 (492)
Q Consensus 384 ~~~~~~~vi~~~~~~~dVPygd~----F~v~~r~~~~~~~~~~c~l~v~~~~~~V~~~K~t~~K~~Iek~~~~~~~~~~~ 459 (492)
..++ .++|......+.+|-..- ....+.|.|+. ++++|+|... +.++..++ +-+.++.+.+.+..-..++
T Consensus 98 ~~~g-~~~i~~~~~~~~~P~~~~~VR~~~~~~~~~i~p-~~~~t~vt~~---~~~dp~G~-iP~~lvn~~~~~~~~~~l~ 171 (189)
T 3qsz_A 98 AGDG-AITVRVEAVPDYLPLRKGKVRIPRAKGQWTLVP-DADGVDVTYQ---MHASPGGS-IPSWLANQTVVETPFGTLK 171 (189)
T ss_dssp CTTS-CEEEEEEECTTSSCCCTTSEECCCEEEEEEEEE-CSSSEEEEEE---EEECSCSS-SCHHHHHHTTTHHHHHHHH
T ss_pred CCCC-eEEEEEEcCCCccCCCCCeEEeeEeeEEEEEEE-CCCeEEEEEE---EEeCCCCC-CCHHHHHHHHHHHHHHHHH
Confidence 3444 445544444456665332 23458899999 8889999999 99998753 3355555555555555555
Q ss_pred HHHHHHH
Q 011161 460 LMLETAR 466 (492)
Q Consensus 460 ~~~~~~~ 466 (492)
.|-+.++
T Consensus 172 ~L~k~~~ 178 (189)
T 3qsz_A 172 ALRSHLR 178 (189)
T ss_dssp HHHHHHT
T ss_pred HHHHHhh
Confidence 5544443
No 71
>2ns9_A Hypothetical protein APE2225; uncharacterized conserved protein, structural genomics, PSI, structure initiative; 1.80A {Aeropyrum pernix} SCOP: d.129.3.10
Probab=51.12 E-value=1e+02 Score=25.29 Aligned_cols=57 Identities=7% Similarity=0.073 Sum_probs=35.4
Q ss_pred eEEEEEEEEEEeeCCCceEEEEEEeeeeEEEecc--ceeehheehhHHHhHHHHHHHHHHHHHHHHh
Q 011161 406 YFEIHGRWHLETIAENSSTIDIKVVSAGAHFKKW--CVIQFKIKTGAVNKYKKEVELMLETARSYIK 470 (492)
Q Consensus 406 ~F~v~~r~~~~~~~~~~c~l~v~~~~~~V~~~K~--t~~K~~Iek~~~~~~~~~~~~~~~~~~~~~~ 470 (492)
-|.....|.|+..+ ++|+|.+. ..+++... .+.+.++.+-+ +..++.+++.+++.+.
T Consensus 97 ~~~~~~~~~l~~~~-~gT~v~~~---~~~~~~g~l~~~~~~~~~~~~----~~~~~~~~~~lk~~~e 155 (157)
T 2ns9_A 97 TLDFTLRFAVEPSG-GGSRVSWV---FEGNVGGLAASMGGRVLDSLA----RRMINDVISGVKRELG 155 (157)
T ss_dssp EEEEEEEEEEEEET-TEEEEEEE---EEEEEEEGGGGSCHHHHHHHH----HHHHHHHHHHHHHHHT
T ss_pred cEEEEEEEEEEeCC-CcEEEEEE---EEEEECcCHHHhhHHHHHHHH----HHHHHHHHHHHHHHHh
Confidence 57778899999887 78999999 88887652 23333332222 3344555555555553
No 72
>2y3a_A Phosphatidylinositol-4,5-bisphosphate 3-kinase Ca subunit beta isoform; transferase, phosphoinositide 3-kinase, RTK; HET: GD9; 3.30A {Mus musculus}
Probab=48.57 E-value=23 Score=40.33 Aligned_cols=68 Identities=19% Similarity=0.334 Sum_probs=45.4
Q ss_pred eEEEEEEEEeecCCCCCCCCCCCcEEEEE--ECCee----eeeeccCCCCCCeeccEEEEEee--CC--CcEEEEEEEEc
Q 011161 14 YLIKLELLAAKNLIGANLNGTSDPYAIIT--CGSEK----RFSSMVPGSRYPMWGEEFNFSVD--EL--PVQIIVTIYDW 83 (492)
Q Consensus 14 ~~L~V~Vi~a~~L~~~d~~g~sDPyv~v~--~~~~~----~~T~~~~~t~nP~W~e~f~f~i~--~~--~~~L~i~v~d~ 83 (492)
..+.|+|..+.++... ...+-||.+. .++.. ..|..+.-..+|.|||.+.|.+. +. ...|.|+||+.
T Consensus 353 ~~f~i~i~~~~~~~~~---~~~~~~V~~~l~~g~~~L~~~~~T~~~~~~~~~~Wnewl~f~i~~~dLPr~a~L~~ti~~~ 429 (1092)
T 2y3a_A 353 NPFQITLVKGNKLNTE---ETVKVHVRAGLFHGTELLCKTVVSSEISGKNDHIWNEQLEFDINICDLPRMARLCFAVYAV 429 (1092)
T ss_dssp SEEEEEECCCCCCCCC---SSCCCCCBCCEEETTEESSCCCBCCCCCSSSCCCCCEEEEEEEESSSCCTTCEEEEECCCC
T ss_pred CCEEEEEEEeccCCCC---CCceEEEEEEEEECCEEccCceecccccCCCCCccceeEEeCCccccCChhcEEEEEEEEe
Confidence 4688999999888543 3456666543 35432 23544444678999999988763 32 45699999986
Q ss_pred C
Q 011161 84 D 84 (492)
Q Consensus 84 d 84 (492)
.
T Consensus 430 ~ 430 (1092)
T 2y3a_A 430 L 430 (1092)
T ss_dssp -
T ss_pred c
Confidence 3
No 73
>1zyi_A Methylosome subunit picln; PH domain, cell volume regulation, RNA splicing, translation; NMR {Canis lupus familiaris}
Probab=48.05 E-value=18 Score=31.77 Aligned_cols=56 Identities=13% Similarity=0.292 Sum_probs=38.2
Q ss_pred eeeecccccceEEEEecCeeEEEeccCCceeEEEEecccee--eEeecccccccCcEEEEE
Q 011161 183 CVIERSFLYHGRMYVSAWHICFHSNAFSRQMKVIIPIGDID--EIQRSQHAFINPAITIIL 241 (492)
Q Consensus 183 c~l~~~~~~~G~lyis~~~~cF~s~~~g~~~~~~i~~~~I~--~i~k~~~~~~~~~i~i~~ 241 (492)
+.+....+-.|.|||+++.+.|.+. ...-+.||+..|. .|++...+.-.|.|-+.+
T Consensus 34 ~vl~~~~~g~GtLyVt~~~l~W~~~---~~~G~sI~YpsIsLHAIsrd~~~~p~~clY~Ql 91 (171)
T 1zyi_A 34 AVLNGKGLGTGTLYIAESRLSWLDG---SGLGFSLEYPTISLHAVSRDLNAYPREHLYVMV 91 (171)
T ss_dssp EEBTTBCCCEEEEEEETTEEEEEET---TTEEEEESSCCCSEEECCSSCSSCCSCCEEEEE
T ss_pred EEECCCccCceEEEEEcCEEEEEcC---CCcEEEeecCeEEEEEEecCCCCCCCceEEEEE
Confidence 3444444456999999999999987 3678999999984 566655443234544444
No 74
>2pso_A STAR-related lipid transfer protein 13; alpha and beta protein, lipid binding, helix swapping, struc genomics, structural genomics consortium, SGC; 2.80A {Homo sapiens} SCOP: d.129.3.2
Probab=47.48 E-value=1.1e+02 Score=27.97 Aligned_cols=79 Identities=8% Similarity=0.020 Sum_probs=49.7
Q ss_pred CCCCeEEEEEEEecCCCCCCCe---EEEEEEEEEEeeCCCceEEEEEEeeeeEEEeccceeehheehhHHHhHHHHHHHH
Q 011161 385 PDKKIFVFETVQQAHDVPFGSY---FEIHGRWHLETIAENSSTIDIKVVSAGAHFKKWCVIQFKIKTGAVNKYKKEVELM 461 (492)
Q Consensus 385 ~~~~~~vi~~~~~~~dVPygd~---F~v~~r~~~~~~~~~~c~l~v~~~~~~V~~~K~t~~K~~Iek~~~~~~~~~~~~~ 461 (492)
.++..+++.....-+++|-.++ ....+.|.|++.++++|+|... +.++..++. =.-+.+....... ..
T Consensus 147 ~~g~~vi~~~Sv~h~~~P~~g~VR~~~~~~g~~i~P~~~~~t~vt~~---~~~Dp~G~i--P~~ln~~~~~~~~----~~ 217 (237)
T 2pso_A 147 PKGMCTLVSLSVEHEEAQLLGGVRAVVMDSQYLIEPCGSGKSRLTHI---CRIDLKGHS--PEWYSKGFGHLCA----AE 217 (237)
T ss_dssp GGGCEEEEEEECCCTTCCCCSSEECCEEEEEEEEEECSTTCEEEEEE---EEECCSSSC--TTTTTTHHHHHHH----HH
T ss_pred CCCEEEEEEEcccCCCCCCCCcEEEEEeccEEEEEECCCCCEEEEEE---EEeCCCCCc--hHHHHHHHHHHHH----HH
Confidence 4445556666666678887643 2346899999998899999999 999987643 1222222222222 34
Q ss_pred HHHHHHHHhhc
Q 011161 462 LETARSYIKIC 472 (492)
Q Consensus 462 ~~~~~~~~~~~ 472 (492)
+..+++.++..
T Consensus 218 l~~LR~~~~~~ 228 (237)
T 2pso_A 218 VARIRNSFQPL 228 (237)
T ss_dssp HHHHHHTTSCC
T ss_pred HHHHHHHHHhh
Confidence 55556666554
No 75
>3fss_A Histone chaperone RTT106; chromosomal protein, nucleus, phosphoprotein, transcription, transcription regulation, transposition; 1.43A {Saccharomyces cerevisiae} PDB: 3tw1_A* 3tvv_A* 3gyp_A 3gyo_A 3to1_A
Probab=44.86 E-value=43 Score=30.83 Aligned_cols=69 Identities=19% Similarity=0.331 Sum_probs=48.1
Q ss_pred eeeeeecccccceEEEEecCeeEEEeccCCceeEEEEeccceeeEeecccccccCcEEEEEecCCCCCCCCCCCCCCCce
Q 011161 181 YSCVIERSFLYHGRMYVSAWHICFHSNAFSRQMKVIIPIGDIDEIQRSQHAFINPAITIILRMGAGGHGVPPLGSPDGRV 260 (492)
Q Consensus 181 ~~c~l~~~~~~~G~lyis~~~~cF~s~~~g~~~~~~i~~~~I~~i~k~~~~~~~~~i~i~~~~g~~~~~~~~~~~~~~~~ 260 (492)
..|.... -.|.||.-++++-|-- .+-.+.|+++||.+|.=.....-.-.+.|++++| .
T Consensus 158 Vkc~~kA---keG~LyfL~~~ilFgf----~KP~l~i~~~dI~svs~Srv~~RTFdl~v~~k~g---------------~ 215 (237)
T 3fss_A 158 LQCHRGT---KEGTLYFLPDHIIFGF----KKPILLLDASDIESITYSSITRLTFNASLVTKDG---------------E 215 (237)
T ss_dssp EEEESSS---SEEEEEECSSEEEEES----SSSCEEEEGGGEEEEEEESCCSSEEEEEEEETTS---------------C
T ss_pred EEEEcCC---CCeEEEEecCceEEec----CCCeEEEEehhEEEEEEEeccCcEEEEEEEECCC---------------C
Confidence 3455444 2499999999888731 3556889999999998887543333778877643 4
Q ss_pred eEEEeeecchH
Q 011161 261 RYKFASFWNRN 271 (492)
Q Consensus 261 ~~~f~sf~~rd 271 (492)
.|.|++.-..+
T Consensus 216 e~eFsmIDq~E 226 (237)
T 3fss_A 216 KYEFSMIDQTE 226 (237)
T ss_dssp EEEEEEEEGGG
T ss_pred eEEEeecCHHH
Confidence 89999865444
No 76
>2d4r_A Hypothetical protein TTHA0849; start domain, structural genomics, riken structural genomics/proteomics initiative, RSGI, unknown function; 2.40A {Thermus thermophilus} SCOP: d.129.3.6
Probab=42.05 E-value=75 Score=25.27 Aligned_cols=58 Identities=10% Similarity=0.148 Sum_probs=35.9
Q ss_pred EEEEEEEeeCCCceEEEEEEeeeeEEEeccceeehheehhHHHhHHHHHHHHHHHHHHHHhhc
Q 011161 410 HGRWHLETIAENSSTIDIKVVSAGAHFKKWCVIQFKIKTGAVNKYKKEVELMLETARSYIKIC 472 (492)
Q Consensus 410 ~~r~~~~~~~~~~c~l~v~~~~~~V~~~K~t~~K~~Iek~~~~~~~~~~~~~~~~~~~~~~~~ 472 (492)
...|.|+..+++ |+|... ..+++. ..++..++..-...-++..++.+++.+++.+.+.
T Consensus 88 ~~~~~~~~~~~g-T~v~~~---~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~l~~lk~~~e~~ 145 (147)
T 2d4r_A 88 EGTWVFLPEGEG-TRVVLT---LTYELT-IPIFGGLLRKLVQKLMQENVESLLKGLEERVLAA 145 (147)
T ss_dssp EEEEEEEECSSS-EEEEEE---EEEECC-CTTTTTTTHHHHHHHHHHHHHHHHHHHHHHHHHT
T ss_pred EEEEEEEECCCC-cEEEEE---EEEecC-CccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhh
Confidence 568889887665 888877 666553 2344444443333445566666777777666653
No 77
>3tvq_A Multifunctional cyclase-dehydratase-3-O-methyl TR TCMN; tetracenomycin, aromatase, taxifolin, dihyroquercet helix-GRIP fold; HET: DQH; 1.67A {Streptomyces glaucescens} PDB: 2rer_A 2res_A 2rez_A
Probab=41.71 E-value=50 Score=28.56 Aligned_cols=30 Identities=17% Similarity=0.376 Sum_probs=23.6
Q ss_pred CCCCeEEEEEEEEEEeeCCCceEEEEEEeeeeEEEec
Q 011161 402 PFGSYFEIHGRWHLETIAENSSTIDIKVVSAGAHFKK 438 (492)
Q Consensus 402 Pygd~F~v~~r~~~~~~~~~~c~l~v~~~~~~V~~~K 438 (492)
|+. ....+|.|+..+.+ |+|... ....|..
T Consensus 87 Pf~---~~~g~W~f~p~~~g-t~V~~~---~df~~~~ 116 (169)
T 3tvq_A 87 PFA---YMNLHWTYRAVAGG-TEMRWV---QEFDMKP 116 (169)
T ss_dssp TEE---EEEEEEEEEEETTE-EEEEEE---EEEEECT
T ss_pred Chh---heeeEEEEEECCCC-EEEEEE---EEEEecC
Confidence 754 46779999999877 999888 7777764
No 78
>1jss_A Stard4, cholesterol-regulated start protein 4; start domain, structural genomics, PSI, protein structure initiative; 2.20A {Mus musculus} SCOP: d.129.3.2
Probab=41.63 E-value=1.9e+02 Score=25.76 Aligned_cols=68 Identities=6% Similarity=0.037 Sum_probs=41.8
Q ss_pred eEEEEEEEecCCCCCCCeEEEE---EEEEEEeeCC--CceEEEEEEeeeeEEEeccceeehheehhHHHhHHHHHHHH
Q 011161 389 IFVFETVQQAHDVPFGSYFEIH---GRWHLETIAE--NSSTIDIKVVSAGAHFKKWCVIQFKIKTGAVNKYKKEVELM 461 (492)
Q Consensus 389 ~~vi~~~~~~~dVPygd~F~v~---~r~~~~~~~~--~~c~l~v~~~~~~V~~~K~t~~K~~Iek~~~~~~~~~~~~~ 461 (492)
.+++.....-++.| .++-+++ +.|.|+..++ +.|+|... +.++..++. =+.++.+.....+.+.++.|
T Consensus 145 ~vi~~~Sv~hp~~~-~g~VR~~~~~~g~~i~p~~~~~~~t~vt~~---~~~Dp~G~i-P~~lvn~~~~~~~~~~~~~L 217 (224)
T 1jss_A 145 LLSCGVSVEWSETR-PEFVRGYNHPCGWFCVPLKDSPSQSLLTGY---IQTDLRGMI-PQSAVDTAMASTLANFYSDL 217 (224)
T ss_dssp EEEEEEECCCCCCC-TTSEECEECSEEEEEEEETTEEEEEEEEEE---ECEECCSCC-CHHHHHHHHHHHHHHHHHHH
T ss_pred EEEEEeeeecCCCC-CCCEEEEecccEEEEEEcCCCCCceEEEEE---EEeCCCCCc-cHHHHHHHHHHhHHHHHHHH
Confidence 44444444456665 3565555 6799999865 58999988 899987743 24455555444444444443
No 79
>2gcl_A Hypothetical 63.0 kDa protein in DAK1-ORC1 intergenic region; chromaint, double PH domain, yfact, DNA replication, RPA; 2.21A {Saccharomyces cerevisiae} SCOP: b.55.1.10 PDB: 2gcj_A
Probab=40.74 E-value=73 Score=29.88 Aligned_cols=69 Identities=20% Similarity=0.340 Sum_probs=47.7
Q ss_pred eeeeeecccccceEEEEecCeeEEEeccCCceeEEEEeccceeeEeecc-cc----cccCcEEEEEecCCCCCCCCCCCC
Q 011161 181 YSCVIERSFLYHGRMYVSAWHICFHSNAFSRQMKVIIPIGDIDEIQRSQ-HA----FINPAITIILRMGAGGHGVPPLGS 255 (492)
Q Consensus 181 ~~c~l~~~~~~~G~lyis~~~~cF~s~~~g~~~~~~i~~~~I~~i~k~~-~~----~~~~~i~i~~~~g~~~~~~~~~~~ 255 (492)
..|.+... .|-||.=++.+-|- .+-.+.||++||.+|+=.. +. .-.-.+.|.++.|
T Consensus 167 Vkcs~ka~---eG~LypL~~gflF~-----~KP~~~i~~~~I~sV~fsrvg~~~~~~rTFdl~v~~k~g----------- 227 (261)
T 2gcl_A 167 VSCSFKAN---EGYLYPLDNAFFFL-----TKPTLYIPFSDVSMVNISRAGQTSTSSRTFDLEVVLRSN----------- 227 (261)
T ss_dssp EEEEETTE---EEEEEECSSEEEEE-----SSSCEEEEGGGEEEEEEEC--------CEEEEEEEESTT-----------
T ss_pred EEEeccCC---ceEEEEecCceEEe-----eCCcEEEEhhHeeEEEEEeccCCcccCceEEEEEEEcCC-----------
Confidence 45666553 39999999988884 3456899999999999665 21 1112688888653
Q ss_pred CCCceeEEEeeecchHH
Q 011161 256 PDGRVRYKFASFWNRNH 272 (492)
Q Consensus 256 ~~~~~~~~f~sf~~rd~ 272 (492)
...|.|++ ++|++
T Consensus 228 ---~~~~~Fs~-IdreE 240 (261)
T 2gcl_A 228 ---RGSTTFAN-ISKEE 240 (261)
T ss_dssp ---CCEEEEEE-EEGGG
T ss_pred ---CccEEEcc-cCHHH
Confidence 35999999 45554
No 80
>1icx_A Protein LLR18A, LLPR10.1A; 7-stranded beta sheet, C-terminal helix, allergen; 1.95A {Lupinus luteus} SCOP: d.129.3.1 PDB: 1ifv_A
Probab=38.38 E-value=1.8e+02 Score=24.45 Aligned_cols=105 Identities=8% Similarity=-0.034 Sum_probs=60.6
Q ss_pred CeeEEEEEEEecCCCCCCCceeEeEEEEEEecCCCCeEEEEEEEecCCCCCCCeEEEEEEEEEEeeCCCceEEEEEEeee
Q 011161 353 GQVREVAFRSLCKSPIYPRDTAMTESQHAVLSPDKKIFVFETVQQAHDVPFGSYFEIHGRWHLETIAENSSTIDIKVVSA 432 (492)
Q Consensus 353 ~~~R~~~y~~~~~~~~gp~~t~~~~~q~~~~~~~~~~~vi~~~~~~~dVPygd~F~v~~r~~~~~~~~~~c~l~v~~~~~ 432 (492)
|..|.++|. + |.+. -...+++...++....+--+... -|+.-..+=+....+.+...++++|.+...
T Consensus 50 Gsir~~~~~-~-----G~~~--~~~kErl~~~D~~~~~~~y~iie-Gd~~~~~~~~~~~~~~v~~~~~~gs~v~w~---- 116 (155)
T 1icx_A 50 GTIKKIIAI-H-----DGHT--SFVLHKLDAIDEANLTYNYSIIG-GEGLDESLEKISYESKILPGPDGGSIGKIN---- 116 (155)
T ss_dssp TCEEEEEEE-S-----SSSE--EEEEEEEEEEEGGGTEEEEEEEE-ETTSCTTEEEEEEEEEEEECGGGCEEEEEE----
T ss_pred CeEEEEEEe-c-----CCcc--eeEEEEEEEEeccCCEEEEEEEe-cCCCccceEEEEEEEEEEecCCCCEEEEEE----
Confidence 678999986 2 3322 23456666443322222212222 233222344556677787776667876666
Q ss_pred eEEEeccceeehheehhHHHhHHHHHHHHHHHHHHHHhhcCC
Q 011161 433 GAHFKKWCVIQFKIKTGAVNKYKKEVELMLETARSYIKICTS 474 (492)
Q Consensus 433 ~V~~~K~t~~K~~Iek~~~~~~~~~~~~~~~~~~~~~~~~~~ 474 (492)
++|.+..-. ......+..++.+..+++.++++|.++..
T Consensus 117 -~~y~~~~~~---~~~~~~~~~~~~~~~~~k~ie~yll~~p~ 154 (155)
T 1icx_A 117 -VKFHTKGDV---LSETVRDQAKFKGLGLFKAIEGYVLAHPD 154 (155)
T ss_dssp -EEEEESSSS---CCHHHHTTHHHHHHHHHHHHHHHHHHCTT
T ss_pred -EEEEECCCC---CCHHHHHHHHHHHHHHHHHHHHHHHhCCC
Confidence 556554311 33334445578899999999999998854
No 81
>2yrb_A Protein fantom; beta sandwich, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: b.7.1.1
Probab=37.77 E-value=1e+02 Score=26.51 Aligned_cols=92 Identities=10% Similarity=0.055 Sum_probs=60.5
Q ss_pred CCCCceEEEEEEEEeecCCCCC-CCCCCCcEEEEEEC---CeeeeeeccCCCCCCeeccEEEEEeeCC--------CcEE
Q 011161 9 QTNSAYLIKLELLAAKNLIGAN-LNGTSDPYAIITCG---SEKRFSSMVPGSRYPMWGEEFNFSVDEL--------PVQI 76 (492)
Q Consensus 9 ~~~~~~~L~V~Vi~a~~L~~~d-~~g~sDPyv~v~~~---~~~~~T~~~~~t~nP~W~e~f~f~i~~~--------~~~L 76 (492)
-.+....+.|.|.++.--+..- ..+..+|..-+.++ -+.+.|.++. +.+|.+|-+-.+.+... ...+
T Consensus 13 l~~gEnlfEihi~~~~~~~~~l~~~~d~~p~tF~t~dF~dfEtq~Tpv~~-G~~p~y~fts~Y~V~~d~~fl~yL~~~~l 91 (156)
T 2yrb_A 13 LERGENLFEIHINKVTFSSEVLQASGDKEPVTFCTYAFYDFELQTTPVVR-GLHPEYNFTSQYLVHVNDLFLQYIQKNTI 91 (156)
T ss_dssp CCSSCEEEEEEEEEECCCHHHHHHHCSSCCEEEEEECSTTCCCEECCCEE-SSSCCCCEEEEEEECCSHHHHHHHHHCCE
T ss_pred ccCCCcEEEEEEeEEEEcHHHHhhccccCCcEEEEEEEeceEeeeccccc-CCCCCcceEEEEEEEeCHHHHHHHhcCCE
Confidence 3455678999998876321110 12335676555543 4556666665 78999999888877421 1348
Q ss_pred EEEEEEcCCCCCCceeEEEEEEcccC
Q 011161 77 IVTIYDWDIIWKSTVLGSVIVTVESE 102 (492)
Q Consensus 77 ~i~v~d~d~~~~dd~IG~~~i~l~~l 102 (492)
.++++.... +.-..||.++|++.++
T Consensus 92 ~lELhqa~g-~~~~tla~~~I~l~~l 116 (156)
T 2yrb_A 92 TLEVHQAYS-TEYETIAACQLKFHEI 116 (156)
T ss_dssp EEEEEEECS-SCEEEEEEEEECCSHH
T ss_pred EEEEEEeeC-CCceEEEEEEEEhHHh
Confidence 888887653 3456899999999988
No 82
>4a8u_A Major pollen allergen BET V 1-J; PR-10 protein; 1.16A {Betula pendula} PDB: 4a8v_A* 4a87_A* 4a81_A* 4a80_A* 4a83_A* 4a86_A* 4a85_A* 4a88_A 4a8g_A* 1b6f_A 1btv_A 1bv1_A 1fsk_A 4a84_A* 1llt_A 1fm4_A* 3k78_A 1qmr_A
Probab=35.50 E-value=2e+02 Score=24.32 Aligned_cols=107 Identities=12% Similarity=0.197 Sum_probs=62.0
Q ss_pred CCeeEEEEEEEecCCCCCCCceeEeEEEEEEecCCCC-eEEEEEEEecCCCCCCCeEEEEEEEEEEeeCCCceEEEEEEe
Q 011161 352 DGQVREVAFRSLCKSPIYPRDTAMTESQHAVLSPDKK-IFVFETVQQAHDVPFGSYFEIHGRWHLETIAENSSTIDIKVV 430 (492)
Q Consensus 352 ~~~~R~~~y~~~~~~~~gp~~t~~~~~q~~~~~~~~~-~~vi~~~~~~~dVPygd~F~v~~r~~~~~~~~~~c~l~v~~~ 430 (492)
-|..|.++|.. -||. -...+++...++.. .+.. +... .|++-..+=+....+.+...++++|.++..
T Consensus 50 ~Gsir~~~~~~-----g~~~---~~~kErl~~iD~~~~~~~y-~iie-gd~l~~~~~~y~~ti~v~p~~~ggs~v~wt-- 117 (159)
T 4a8u_A 50 PGTIKKISFPE-----GFPF---KYVKDRVDEVDHTNFKYSY-SVIE-GGPVGDTLEKISNEIKIVATPNGGSILKIN-- 117 (159)
T ss_dssp TTCEEEEECCT-----TSSC---SEEEEEEEEEETTTTEEEE-EEEE-ETTCBTTEEEEEEEEEEEECTTSCEEEEEE--
T ss_pred CceEEEEEEec-----CCCc---cEEEEEEEEEccccCEEEE-EEee-CCCCccceEEEEEEEEEEECCCCceEEEEE--
Confidence 36789999863 2332 24567776554433 2222 2222 344422234445567777777778876666
Q ss_pred eeeEEEeccceeehheehhHHHhHHHHHHHHHHHHHHHHhhcCCC
Q 011161 431 SAGAHFKKWCVIQFKIKTGAVNKYKKEVELMLETARSYIKICTSG 475 (492)
Q Consensus 431 ~~~V~~~K~t~~K~~Iek~~~~~~~~~~~~~~~~~~~~~~~~~~~ 475 (492)
..|.+..= ..+.-...+..++.+..+++.+..+|.++...
T Consensus 118 ---~~y~~~~~--~~~~~~~~k~~~~~~~~~~k~ie~yll~np~~ 157 (159)
T 4a8u_A 118 ---NKYHTKGD--HEVKAEQIKASKEMGETLLRAVESYLLAHSDA 157 (159)
T ss_dssp ---EEEEESSS--CCC-CHHHHHHHHHHHHHHHHHHHHHHHCTTT
T ss_pred ---EEEEECCC--CcCCHHHHHHHHHHHHHHHHHHHHHHhhChhh
Confidence 55655321 12333344556778889999999999988753
No 83
>3rws_A MTN13 protein; zeatin, cytokinin, hormone, lucerne, nodulin, NODU plant protein; HET: ZEA; 1.85A {Medicago truncatula}
Probab=34.05 E-value=2.3e+02 Score=24.39 Aligned_cols=103 Identities=11% Similarity=0.156 Sum_probs=59.7
Q ss_pred CCeeEEEEEEEecCCCCCCCceeEeEEEEEEecCCCC-eEEEEEEEecCCC----CCCCeEEEEEEEEEEeeCCCceEEE
Q 011161 352 DGQVREVAFRSLCKSPIYPRDTAMTESQHAVLSPDKK-IFVFETVQQAHDV----PFGSYFEIHGRWHLETIAENSSTID 426 (492)
Q Consensus 352 ~~~~R~~~y~~~~~~~~gp~~t~~~~~q~~~~~~~~~-~~vi~~~~~~~dV----Pygd~F~v~~r~~~~~~~~~~c~l~ 426 (492)
-|..|.++|. ||.. ...+++...++.. .|.. +... .|+ ||. +....+.+...++++|.++
T Consensus 56 ~Gsir~~t~~-------g~~~---~~kErl~~iD~~~~~~sY-~iie-gd~l~~~p~~---~y~~ti~v~p~~~ggs~v~ 120 (168)
T 3rws_A 56 PGTIKKLTFV-------GDFG---STKQHIDMVDRENCAYTY-SVYE-GIALSDQPLE---KIVFEFKLVPTPEEGCIVK 120 (168)
T ss_dssp TTCEEEEEES-------SSSC---EEEEEEEEEETTTTEEEE-EECS-SCCBTTBCEE---EEEEEEEEEECTTSCEEEE
T ss_pred CCeEEEEEEc-------CCCe---EEEEEEEEEcccCCEEEE-EEEc-cCcccCcCce---EEEEEEEEEECCCCceEEE
Confidence 3678999987 3321 3556776544332 2222 2222 333 444 3344566777767788766
Q ss_pred EEEeeeeEEEeccceeehheehhHHHhHHHHHHHHHHHHHHHHhhcCCC
Q 011161 427 IKVVSAGAHFKKWCVIQFKIKTGAVNKYKKEVELMLETARSYIKICTSG 475 (492)
Q Consensus 427 v~~~~~~V~~~K~t~~K~~Iek~~~~~~~~~~~~~~~~~~~~~~~~~~~ 475 (492)
.. ..|.+..=- ..+.-......++.+..+++.++.+|.++...
T Consensus 121 wt-----~~y~~~~~d-~~~~~e~~k~~~~~~~~~~k~ie~yllanp~~ 163 (168)
T 3rws_A 121 ST-----TKYYTKGDD-IELSKDYLEAGIERFEGFTKAVESFLLANPDY 163 (168)
T ss_dssp EE-----EEEEECSSS-CCCCHHHHHHHHHHHHHHHHHHHHHHHHCTTC
T ss_pred EE-----EEEEECCCc-cCCCHHHHHHHHHHHHHHHHHHHHHHHhChHh
Confidence 66 555552200 11223334557788889999999999988754
No 84
>2flh_A Cytokinin-specific binding protein; zeatin, pathogenesis-related proteins, multiple- ligand binding, plant protein; HET: ZEA; 1.20A {Vigna radiata} PDB: 3c0v_A*
Probab=31.13 E-value=2.4e+02 Score=23.72 Aligned_cols=100 Identities=14% Similarity=0.197 Sum_probs=51.2
Q ss_pred CCeeEEEEEEEecCCCCCCCceeEeEEEEEEecCC-CCeEEEEEEEe--cCCCCCCCeEEEEEEEEEEeeCCCceEEEEE
Q 011161 352 DGQVREVAFRSLCKSPIYPRDTAMTESQHAVLSPD-KKIFVFETVQQ--AHDVPFGSYFEIHGRWHLETIAENSSTIDIK 428 (492)
Q Consensus 352 ~~~~R~~~y~~~~~~~~gp~~t~~~~~q~~~~~~~-~~~~vi~~~~~--~~dVPygd~F~v~~r~~~~~~~~~~c~l~v~ 428 (492)
.|..|.++|.- -.+| . ...+++...++ ...+-. +... ..+.||.++- ..+.+...++++|.+...
T Consensus 50 ~Gsvr~~~~~~----g~~~--~--~~kErl~~iD~~~~~~~y-~iieg~~l~~~~~~~~---~~i~v~p~~~ggs~v~wt 117 (155)
T 2flh_A 50 VGTILIFNFLP----EVSP--S--YQREEITEFDESSHEIGL-QVIEGGYLSQGLSYYK---TTFKLSEIEEDKTLVNVK 117 (155)
T ss_dssp TTCEEEEEECT----TSSS--C--EEEEEEEEEETTTTEEEE-EEEEEGGGGTTCSEEE---EEEEEEEEETTEEEEEEE
T ss_pred CCeEEEEEeeC----CCCC--c--EEEEEEEEEeCCCCEEEE-EEEeccccccCceEEE---EEEEEEECCCCCEEEEEE
Confidence 36789999852 0123 2 34555654433 233322 2222 1123666543 445566666677866555
Q ss_pred EeeeeEEEeccceeehheehhHHHhHH--HHHHHHHHHHHHHHhhcC
Q 011161 429 VVSAGAHFKKWCVIQFKIKTGAVNKYK--KEVELMLETARSYIKICT 473 (492)
Q Consensus 429 ~~~~~V~~~K~t~~K~~Iek~~~~~~~--~~~~~~~~~~~~~~~~~~ 473 (492)
+.|.+..=.. + -....+ +.+..+++.++.+|.+++
T Consensus 118 -----~~y~~~~~~~--~---~~~~~~~~~~~~~~~k~ie~yll~~~ 154 (155)
T 2flh_A 118 -----ISYDHDSDIE--E---KVTPTKTSQSTLMYLRRLERYLSNGS 154 (155)
T ss_dssp -----EEEEC------------CCHHHHHHHHHHHHHHHHHHHC---
T ss_pred -----EEEEECCCCc--c---ChhHhhhHHHHHHHHHHHHHHHhhCC
Confidence 5666643110 1 223445 778899999999997653
No 85
>1t17_A Conserved hypothetical protein; beta-alpha-beta-BETA-beta-BETA-beta-BETA-helix, structural G protein structure initiative, PSI, NESG; NMR {Caulobacter crescentus} SCOP: d.129.3.6
Probab=30.05 E-value=72 Score=26.25 Aligned_cols=33 Identities=9% Similarity=0.327 Sum_probs=22.9
Q ss_pred EEEEEEEEeeCCCceEEEEEEeeeeEEEeccceeehhe
Q 011161 409 IHGRWHLETIAENSSTIDIKVVSAGAHFKKWCVIQFKI 446 (492)
Q Consensus 409 v~~r~~~~~~~~~~c~l~v~~~~~~V~~~K~t~~K~~I 446 (492)
..++|.|+..+++ |+|... ..+++. +.++..++
T Consensus 91 ~~g~w~f~~~~~g-t~v~~~---~~~~~~-~~l~~~l~ 123 (148)
T 1t17_A 91 LNNGWRFMPEGDA-TRVEFV---IEFAFK-SALLDAML 123 (148)
T ss_dssp EEEEEEEEEETTE-EEEEEE---EEECCS-CHHHHHHH
T ss_pred cEEEEEEEECCCC-eEEEEE---EEEEEC-cHHHHHHH
Confidence 5899999998766 888877 666664 44444333
No 86
>1w7p_D VPS36P, YLR417W; ESCRT-II complex, endosomal protein sorting, protein transpo; 3.60A {Saccharomyces cerevisiae} SCOP: a.4.5.54 a.4.5.54
Probab=30.05 E-value=11 Score=39.62 Aligned_cols=39 Identities=18% Similarity=0.320 Sum_probs=0.0
Q ss_pred eEEEEecCeeEEEeccCCceeEEEEeccceeeEeecccc
Q 011161 193 GRMYVSAWHICFHSNAFSRQMKVIIPIGDIDEIQRSQHA 231 (492)
Q Consensus 193 G~lyis~~~~cF~s~~~g~~~~~~i~~~~I~~i~k~~~~ 231 (492)
|++|+|.++|||--..-..+..+.|++++|..++.....
T Consensus 45 G~~yLTShRiiyvD~~~p~~~s~~l~L~~I~~~e~~agf 83 (566)
T 1w7p_D 45 GRIFLTSQRIIYIDDAKPTQNSLGLELDDLAYVNYSSGF 83 (566)
T ss_dssp ---------------------------------------
T ss_pred ceEEEEeeeEEEecCCCCcceEEEEEhHHcceeeeeecc
Confidence 999999999999665544456789999999999997654
No 87
>2e3n_A Lipid-transfer protein CERT; ceramide transfer, lipid transport; HET: 6CM; 1.40A {Homo sapiens} PDB: 2e3m_A* 2e3o_A* 2e3p_A* 2e3q_A* 2e3r_A* 2e3s_A 2z9y_A* 3h3q_A* 3h3r_A* 3h3s_A* 3h3t_A* 2z9z_A*
Probab=27.67 E-value=2.7e+02 Score=25.18 Aligned_cols=80 Identities=10% Similarity=0.042 Sum_probs=44.1
Q ss_pred CeEEEEEEEecCCCCCCCeE-EEE------EEEEEEee--------CCCceEEEEEEeeeeEEEeccceeehheehhHHH
Q 011161 388 KIFVFETVQQAHDVPFGSYF-EIH------GRWHLETI--------AENSSTIDIKVVSAGAHFKKWCVIQFKIKTGAVN 452 (492)
Q Consensus 388 ~~~vi~~~~~~~dVPygd~F-~v~------~r~~~~~~--------~~~~c~l~v~~~~~~V~~~K~t~~K~~Iek~~~~ 452 (492)
..+++.....-+++|-..-| +++ ..|.+... ++++|++... +.++..++. =+.++.+.+..
T Consensus 156 ~~~i~~~Sv~~~~~P~~~g~VR~~~~~~~~~~~~i~~~~g~~~l~~~~~~t~vt~~---~~~Dp~G~i-P~~lvn~~~~~ 231 (255)
T 2e3n_A 156 TWIVCNFSVDHDSAPLNNRCVRAKINVAMICQTLVSPPEGNQEISRDNILCKITYV---ANVNPGGWA-PASVLRAVAKR 231 (255)
T ss_dssp EEEEEEEECCCTTSCCCSSSEECEEEEEEEEEEEEC---CCCCCCGGGEEEEEEEE---EEEECSSCC-CHHHHHHHHHH
T ss_pred EEEEEEeccCCCCCCCCCCCEEEEEEeeeeeeeEeccCCCCcccccCCCcEEEEEE---EEeCCCCcc-CHHHHHHHHhc
Confidence 45566666666677766443 333 12222221 2367999888 889887643 23344444455
Q ss_pred hHHHHHHHHHHHHHHHHhh
Q 011161 453 KYKKEVELMLETARSYIKI 471 (492)
Q Consensus 453 ~~~~~~~~~~~~~~~~~~~ 471 (492)
+.-..++.|-+.+++..+.
T Consensus 232 ~~~~~l~~L~k~v~~~~~~ 250 (255)
T 2e3n_A 232 EYPKFLKRFTSYVQEKTAG 250 (255)
T ss_dssp HHHHHHHHHHHHHHHHHTT
T ss_pred cccHHHHHHHHHHHHhccC
Confidence 5555666665555554443
No 88
>1yfn_A Stringent starvation protein B; protein-peptide complex, SSPB, RSEA, protein binding; 1.80A {Escherichia coli} SCOP: b.136.1.1 PDB: 1ox9_A 1ox8_A
Probab=25.94 E-value=1e+02 Score=25.18 Aligned_cols=38 Identities=13% Similarity=0.214 Sum_probs=34.5
Q ss_pred eEEEEecCeeEEEeccCCceeEEEEeccceeeEeeccc
Q 011161 193 GRMYVSAWHICFHSNAFSRQMKVIIPIGDIDEIQRSQH 230 (492)
Q Consensus 193 G~lyis~~~~cF~s~~~g~~~~~~i~~~~I~~i~k~~~ 230 (492)
+.|.+.+..+.|....=|....+.||+..|..|-...+
T Consensus 61 ~~L~i~nd~IsF~ARFgGv~~~i~VP~~AV~aIyArEn 98 (118)
T 1yfn_A 61 GNLELANDEVRFNARFGGIPRQVSVPLAAVLAIYAREN 98 (118)
T ss_dssp EEEEECSSEEEEEEEETTEEEEEEEEGGGEEEEEETTT
T ss_pred cCeEEeccEEEEEEEECCEeEEEEEehHhheEeeeeec
Confidence 78899999999999988888999999999999988664
No 89
>1ou9_A Stringent starvation protein B homolog; SSRA peptide-binding protein, homodimer, transport protein; 1.80A {Haemophilus influenzae} SCOP: b.136.1.1 PDB: 1oul_A 1zsz_C
Probab=24.76 E-value=1.1e+02 Score=25.38 Aligned_cols=38 Identities=18% Similarity=0.269 Sum_probs=34.6
Q ss_pred eEEEEecCeeEEEeccCCceeEEEEeccceeeEeeccc
Q 011161 193 GRMYVSAWHICFHSNAFSRQMKVIIPIGDIDEIQRSQH 230 (492)
Q Consensus 193 G~lyis~~~~cF~s~~~g~~~~~~i~~~~I~~i~k~~~ 230 (492)
+.|.+.+..+.|....=|....+.||+..|..|-...+
T Consensus 60 ~~L~i~nd~IsF~ARFgGv~~~I~VP~~AV~aIyArEn 97 (129)
T 1ou9_A 60 GNLQLTNDFIQFNARFKGVSRELYIPMGAALAIYAREN 97 (129)
T ss_dssp EEEEECSSEEEEEEEETTEEEEEEEEGGGEEEEEETTT
T ss_pred cCeEEeccEEEEEEEECCEeEEEEEehHheeEeeeccc
Confidence 78899999999999988888999999999999988764
No 90
>1tw0_A Pathogenesis-related class 10 protein SPE-16; seven antiparallel beta-sheet, plant protein; 2.20A {Pachyrhizus erosus} SCOP: d.129.3.1 PDB: 1txc_A*
Probab=23.54 E-value=3.3e+02 Score=22.81 Aligned_cols=106 Identities=6% Similarity=-0.053 Sum_probs=61.0
Q ss_pred CeeEEEEEEEecCCCCCCCceeEeEEEEEEecCCCCeEEEEEEEecCCCCCCCeEEEEEEEEEEeeCCCceEEEEEEeee
Q 011161 353 GQVREVAFRSLCKSPIYPRDTAMTESQHAVLSPDKKIFVFETVQQAHDVPFGSYFEIHGRWHLETIAENSSTIDIKVVSA 432 (492)
Q Consensus 353 ~~~R~~~y~~~~~~~~gp~~t~~~~~q~~~~~~~~~~~vi~~~~~~~dVPygd~F~v~~r~~~~~~~~~~c~l~v~~~~~ 432 (492)
|..|.++|.- |.+. -...+++...++....+--+... -|+.-..+=+....+.+...++++|.+...
T Consensus 50 Gsir~~~~~~------G~~~--~~~kErl~~~D~~~~~~~y~iie-Gd~~~~~~~~~~~~~~v~~~~~~gs~v~w~---- 116 (157)
T 1tw0_A 50 GTIKKITANE------GDKT--SFVLQKVDAIDEANLGYDYSIVG-GTGLPESLEKLSFETKVVAGSGGGSISKVT---- 116 (157)
T ss_dssp TCEEEEEEEE------TTEE--EEEEEEEEEEETTTTEEEEEEEE-CTTSCTTEEEEEEEEEEEECSSSSEEEEEE----
T ss_pred CeEEEEEeeC------CCcc--ceEEEEEEEEeccCCEEEEEEEe-cCCCccceEEEEEEEEEEecCCCCEEEEEE----
Confidence 6789999972 3222 23566666443323322223233 333322455566777888876667877666
Q ss_pred eEEEeccceeehheehhHHHhHHHHHHHHHHHHHHHHhhcCC
Q 011161 433 GAHFKKWCVIQFKIKTGAVNKYKKEVELMLETARSYIKICTS 474 (492)
Q Consensus 433 ~V~~~K~t~~K~~Iek~~~~~~~~~~~~~~~~~~~~~~~~~~ 474 (492)
++|.+..- .......+...++.+..+++.++++|.++..
T Consensus 117 -~~y~~~~~--~~~~~~~~~~~~~~~~~~~k~ie~yll~~p~ 155 (157)
T 1tw0_A 117 -LKFHTKGD--APLSDAVRDDALAKGAGFFKAIEGYVLANPA 155 (157)
T ss_dssp -EEEEESTT--CCCCHHHHHHHHHHHHHHHHHHHHHHHHCGG
T ss_pred -EEEEECCC--CCCCHHHHHHHHHHHHHHHHHHHHHHHhCcc
Confidence 55655321 1122223334578899999999999988753
No 91
>1ou8_A Stringent starvation protein B homolog; peptide-binding pocket, protein-peptide complex, homodimer, transport protein; 1.60A {Haemophilus influenzae} SCOP: b.136.1.1 PDB: 1zsz_A 1twb_A 1zsz_B
Probab=23.26 E-value=1.5e+02 Score=23.81 Aligned_cols=38 Identities=18% Similarity=0.269 Sum_probs=34.7
Q ss_pred eEEEEecCeeEEEeccCCceeEEEEeccceeeEeeccc
Q 011161 193 GRMYVSAWHICFHSNAFSRQMKVIIPIGDIDEIQRSQH 230 (492)
Q Consensus 193 G~lyis~~~~cF~s~~~g~~~~~~i~~~~I~~i~k~~~ 230 (492)
+.|.+.+..+.|....=|....+.||+..|..|-...+
T Consensus 60 ~~L~i~nd~isF~ARFgGv~~~i~VP~~AV~aIyArEn 97 (111)
T 1ou8_A 60 GNLQLTNDFIQFNARFKGVSRELYIPMGAALAIYAREN 97 (111)
T ss_dssp EEEEECSSEEEEEEEETTEEEEEEEEGGGEEEEEETTT
T ss_pred cCeEEeccEEEEEEEECCEeEEEEEehHhheEeeeecc
Confidence 78899999999999988888999999999999988764
No 92
>2vjg_A Major allergen DAU C 1; major carrot allergen, pathogenesis-related protein, plant defense; HET: P4C PG4 PGE; 2.70A {Daucus carota} PDB: 2wql_A* 2bk0_A
Probab=22.96 E-value=3.4e+02 Score=22.78 Aligned_cols=105 Identities=14% Similarity=0.102 Sum_probs=59.2
Q ss_pred CCeeEEEEEEEecCCCCCCCceeEeEEEEEEecCCCCeEEEEEEEecCCCCCCCeEEEEEEEEEEeeCCCceEEEEEEee
Q 011161 352 DGQVREVAFRSLCKSPIYPRDTAMTESQHAVLSPDKKIFVFETVQQAHDVPFGSYFEIHGRWHLETIAENSSTIDIKVVS 431 (492)
Q Consensus 352 ~~~~R~~~y~~~~~~~~gp~~t~~~~~q~~~~~~~~~~~vi~~~~~~~dVPygd~F~v~~r~~~~~~~~~~c~l~v~~~~ 431 (492)
-|..|.++|.. -||.. +..+++...++....+--+... .|++-..+=+....+.+...++++|.++..
T Consensus 50 ~Gsir~~~~~~-----g~~~~---~~kErl~~iD~~~~~~~y~iie-gd~l~~~~~~~~~ti~v~p~~~ggs~v~wt--- 117 (154)
T 2vjg_A 50 AGTVRIITLPE-----GSPIT---TMTVRTDAVNKEALSYDSTVID-GDILLGFIESIETHMVVVPTADGGSITKTT--- 117 (154)
T ss_dssp TTCEEEEECCT-----TCSCC---EEEEEEEEEETTTTEEEEEEEE-SGGGTTTEEEEEEEEEEEECTTSCEEEEEE---
T ss_pred CceEEEEEecC-----CCCce---EEEEEEEEEeccCCEEEEEEEe-cCCCccceEEEEEEEEEEECCCCcEEEEEE---
Confidence 46789999842 23422 3566666444432222212222 343322244455567777776777876666
Q ss_pred eeEEEeccceeehheehhHHHhHHHHHHHHHHHHHHHHhhc
Q 011161 432 AGAHFKKWCVIQFKIKTGAVNKYKKEVELMLETARSYIKIC 472 (492)
Q Consensus 432 ~~V~~~K~t~~K~~Iek~~~~~~~~~~~~~~~~~~~~~~~~ 472 (492)
..|.+..= ..+.-...+..++.+..+++.++.+|.+|
T Consensus 118 --~~y~~~~~--~~~~~~~~~~~~~~~~~~~k~ie~yllan 154 (154)
T 2vjg_A 118 --AIFHTKGD--AVVPEENIKFADAQNTALFKAIEAYLIAN 154 (154)
T ss_dssp --EEEEESTT--CCCCHHHHHHHHHHHHHHHHHHHHHHHHC
T ss_pred --EEEEECCC--CCCCHHHHHHHHHHHHHHHHHHHHHHhcC
Confidence 55655221 12333345556788888999999998764
No 93
>2qim_A PR10.2B; trans-zeatin, cytokinin, plant hormones, plant protein, PR-1 protein, pathogenesis-related protein, allergen; HET: ZEA; 1.35A {Lupinus luteus} PDB: 3e85_A* 1xdf_A* 2k7h_A
Probab=22.61 E-value=3.4e+02 Score=22.69 Aligned_cols=106 Identities=8% Similarity=-0.013 Sum_probs=60.4
Q ss_pred CCeeEEEEEEEecCCCCCCCceeEeEEEEEEecCCCC-eEEEEEEEecCCCCCCCeEEEEEEEEEEeeCCCceEEEEEEe
Q 011161 352 DGQVREVAFRSLCKSPIYPRDTAMTESQHAVLSPDKK-IFVFETVQQAHDVPFGSYFEIHGRWHLETIAENSSTIDIKVV 430 (492)
Q Consensus 352 ~~~~R~~~y~~~~~~~~gp~~t~~~~~q~~~~~~~~~-~~vi~~~~~~~dVPygd~F~v~~r~~~~~~~~~~c~l~v~~~ 430 (492)
.|..|.++|. + |... -...+++...++.. .+-. +... -|+.-..+=+....+.+...++++|.+...
T Consensus 50 ~Gsir~~~~~-~-----g~~~--~~~kErl~~~D~~~~~~~y-~iie-G~~~~~~~~~~~~~~~v~~~~~~gs~v~wt-- 117 (158)
T 2qim_A 50 PGTIKKLTFI-E-----GGES--KYVLHKIEAIDEANLGYNY-SIVG-GVGLPDTIEKISFETKLVEGANGGSIGKVT-- 117 (158)
T ss_dssp TTCEEEEEEE-E-----TTEE--EEEEEEEEEEEGGGTEEEE-EEEE-ESSCCCSEEEEEEEEEEEECSTTCEEEEEE--
T ss_pred CCeEEEEEEc-C-----CCcc--eeEEEEEEEEecCCCEEEE-EEEe-ccCCccceEEEEEEEEEEecCCCCEEEEEE--
Confidence 3678999987 2 3322 23456665433322 3222 2222 232222344556778888877677877666
Q ss_pred eeeEEEeccceeehheehhHHHhHHHHHHHHHHHHHHHHhhcCC
Q 011161 431 SAGAHFKKWCVIQFKIKTGAVNKYKKEVELMLETARSYIKICTS 474 (492)
Q Consensus 431 ~~~V~~~K~t~~K~~Iek~~~~~~~~~~~~~~~~~~~~~~~~~~ 474 (492)
++|.+..- ...........++.+..+++.++++|.++..
T Consensus 118 ---~~y~~~~~--~~~~~~~~~~~~~~~~~~~k~ie~yll~~p~ 156 (158)
T 2qim_A 118 ---IKIETKGD--AQPNEEEGKAAKARGDAFFKAIESYLSAHPD 156 (158)
T ss_dssp ---EEEEESTT--CCCCHHHHHHHHHHHHHHHHHHHHHHHHCSS
T ss_pred ---EEEEECCC--CCCCHHHHHHHHHHHHHHHHHHHHHHHhCcC
Confidence 55655321 1122223334578899999999999988753
Done!