Query 011163
Match_columns 492
No_of_seqs 178 out of 2455
Neff 9.6
Searched_HMMs 29240
Date Mon Mar 25 22:06:51 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/011163.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/011163hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3vue_A GBSS-I, granule-bound s 100.0 4.5E-69 1.6E-73 558.4 43.3 466 5-490 6-512 (536)
2 2qzs_A Glycogen synthase; glyc 100.0 1.8E-54 6E-59 447.7 41.7 459 9-490 1-477 (485)
3 1rzu_A Glycogen synthase 1; gl 100.0 3.3E-54 1.1E-58 445.6 41.0 455 9-490 1-476 (485)
4 3fro_A GLGA glycogen synthase; 100.0 7.4E-51 2.5E-55 414.4 43.5 418 7-490 1-431 (439)
5 2r60_A Glycosyl transferase, g 100.0 1.2E-46 4.1E-51 390.4 34.6 417 1-490 1-460 (499)
6 3c48_A Predicted glycosyltrans 100.0 1.9E-45 6.4E-50 375.0 36.5 396 5-490 17-426 (438)
7 3s28_A Sucrose synthase 1; gly 100.0 4.9E-46 1.7E-50 397.5 27.0 429 7-489 277-769 (816)
8 3okp_A GDP-mannose-dependent a 100.0 5E-44 1.7E-48 358.9 28.5 364 7-490 3-380 (394)
9 2jjm_A Glycosyl transferase, g 100.0 8.1E-43 2.8E-47 350.6 31.4 368 9-490 14-386 (394)
10 2x6q_A Trehalose-synthase TRET 100.0 4.9E-42 1.7E-46 347.4 29.3 365 6-490 38-415 (416)
11 2iw1_A Lipopolysaccharide core 100.0 1E-42 3.5E-47 347.0 17.3 362 9-489 1-371 (374)
12 3oy2_A Glycosyltransferase B73 100.0 1.9E-40 6.4E-45 335.5 31.7 360 9-490 1-391 (413)
13 2iuy_A Avigt4, glycosyltransfe 100.0 1.3E-40 4.3E-45 328.1 25.4 311 8-490 3-336 (342)
14 2gek_A Phosphatidylinositol ma 100.0 1.6E-40 5.4E-45 334.8 25.9 360 7-490 19-384 (406)
15 3nb0_A Glycogen [starch] synth 100.0 3.3E-41 1.1E-45 344.3 19.2 430 23-490 40-634 (725)
16 2x0d_A WSAF; GT4 family, trans 100.0 3.7E-37 1.2E-41 310.1 17.8 356 5-490 43-410 (413)
17 1f0k_A MURG, UDP-N-acetylgluco 100.0 4.7E-34 1.6E-38 283.4 24.2 340 8-490 6-358 (364)
18 2hy7_A Glucuronosyltransferase 100.0 1.3E-34 4.4E-39 291.5 16.7 246 137-490 124-380 (406)
19 1uqt_A Alpha, alpha-trehalose- 100.0 1.9E-31 6.6E-36 271.8 26.1 313 123-489 109-454 (482)
20 2vsy_A XCC0866; transferase, g 100.0 6.7E-31 2.3E-35 276.5 26.1 331 5-490 202-560 (568)
21 3beo_A UDP-N-acetylglucosamine 100.0 6.6E-31 2.2E-35 261.8 21.2 281 125-487 85-374 (375)
22 1vgv_A UDP-N-acetylglucosamine 100.0 7.6E-31 2.6E-35 262.3 20.9 293 125-490 76-377 (384)
23 2c4m_A Glycogen phosphorylase; 100.0 1.9E-27 6.5E-32 246.9 28.6 449 23-490 112-720 (796)
24 2bfw_A GLGA glycogen synthase; 100.0 5.8E-28 2E-32 218.6 19.5 184 259-469 2-194 (200)
25 3t5t_A Putative glycosyltransf 99.9 3.8E-26 1.3E-30 230.0 25.7 305 123-485 133-469 (496)
26 1l5w_A Maltodextrin phosphoryl 99.9 3.7E-27 1.3E-31 244.7 17.5 351 121-490 273-731 (796)
27 3qhp_A Type 1 capsular polysac 99.9 9.5E-27 3.3E-31 204.1 16.3 159 308-480 3-166 (166)
28 1v4v_A UDP-N-acetylglucosamine 99.9 8E-25 2.7E-29 217.9 28.0 218 218-490 143-365 (376)
29 2gj4_A Glycogen phosphorylase, 99.9 3.9E-25 1.3E-29 230.5 18.6 339 137-490 320-755 (824)
30 2f9f_A First mannosyl transfer 99.9 2E-23 6.9E-28 185.0 16.8 148 307-467 23-174 (177)
31 2xci_A KDO-transferase, 3-deox 99.9 6.8E-23 2.3E-27 203.5 18.2 200 214-469 146-358 (374)
32 3otg_A CALG1; calicheamicin, T 99.9 1.1E-20 3.8E-25 190.3 20.2 160 306-488 242-409 (412)
33 3ot5_A UDP-N-acetylglucosamine 99.8 2.9E-19 9.8E-24 178.9 21.9 212 220-481 168-384 (403)
34 3dzc_A UDP-N-acetylglucosamine 99.8 3.5E-19 1.2E-23 178.0 19.6 282 125-481 101-390 (396)
35 3rhz_A GTF3, nucleotide sugar 99.8 3.9E-19 1.3E-23 172.8 17.2 253 135-488 72-336 (339)
36 3s2u_A UDP-N-acetylglucosamine 99.8 3.6E-17 1.2E-21 161.7 26.8 161 308-486 182-355 (365)
37 2iyf_A OLED, oleandomycin glyc 99.8 3E-17 1E-21 166.2 25.0 159 306-488 232-400 (430)
38 4fzr_A SSFS6; structural genom 99.7 9.3E-18 3.2E-22 168.2 15.4 151 306-481 227-395 (398)
39 3ia7_A CALG4; glycosysltransfe 99.7 1.1E-15 3.7E-20 153.1 26.7 161 306-488 231-399 (402)
40 3tsa_A SPNG, NDP-rhamnosyltran 99.7 5.2E-16 1.8E-20 155.0 19.5 159 307-486 219-387 (391)
41 3oti_A CALG3; calicheamicin, T 99.7 6.8E-16 2.3E-20 154.6 19.7 154 306-486 232-396 (398)
42 3rsc_A CALG2; TDP, enediyne, s 99.7 3.2E-14 1.1E-18 143.1 27.1 159 306-488 247-414 (415)
43 2p6p_A Glycosyl transferase; X 99.6 4.6E-13 1.6E-17 133.2 28.4 148 307-480 211-373 (384)
44 4hwg_A UDP-N-acetylglucosamine 99.5 5.7E-14 1.9E-18 139.2 14.7 261 125-465 84-351 (385)
45 2yjn_A ERYCIII, glycosyltransf 99.3 8.8E-11 3E-15 119.0 22.3 155 307-487 268-435 (441)
46 2iya_A OLEI, oleandomycin glyc 99.3 7.1E-10 2.4E-14 111.6 28.7 157 306-486 255-420 (424)
47 3h4t_A Glycosyltransferase GTF 99.3 2.5E-10 8.4E-15 114.3 24.8 157 307-487 222-382 (404)
48 3q3e_A HMW1C-like glycosyltran 99.2 8.5E-11 2.9E-15 120.3 14.1 183 298-489 432-623 (631)
49 4amg_A Snogd; transferase, pol 99.1 3.5E-09 1.2E-13 105.5 19.7 152 306-481 237-395 (400)
50 1iir_A Glycosyltransferase GTF 99.1 3.2E-08 1.1E-12 99.2 24.3 135 307-469 239-381 (415)
51 2o6l_A UDP-glucuronosyltransfe 99.0 1.4E-09 4.9E-14 94.7 10.6 130 307-464 22-162 (170)
52 1rrv_A Glycosyltransferase GTF 99.0 1.3E-07 4.4E-12 94.8 24.8 134 307-468 238-381 (416)
53 1ygp_A Yeast glycogen phosphor 98.5 9.8E-07 3.3E-11 92.2 14.4 219 211-439 467-760 (879)
54 4gyw_A UDP-N-acetylglucosamine 98.2 3.8E-05 1.3E-09 82.0 19.0 182 296-489 514-705 (723)
55 1psw_A ADP-heptose LPS heptosy 97.2 0.0023 7.9E-08 61.8 11.5 115 291-414 166-287 (348)
56 3tov_A Glycosyl transferase fa 96.4 0.022 7.6E-07 55.0 11.6 112 294-414 174-287 (349)
57 2c1x_A UDP-glucose flavonoid 3 96.3 0.02 6.8E-07 57.5 10.9 146 306-468 271-423 (456)
58 3hbm_A UDP-sugar hydrolase; PS 96.2 0.017 5.7E-07 53.9 8.8 93 308-414 159-251 (282)
59 3hbf_A Flavonoid 3-O-glucosylt 96.0 0.069 2.4E-06 53.4 13.2 147 307-468 274-425 (454)
60 2pq6_A UDP-glucuronosyl/UDP-gl 95.8 0.096 3.3E-06 52.9 13.5 145 307-468 296-450 (482)
61 2gt1_A Lipopolysaccharide hept 94.5 0.14 4.7E-06 48.7 9.3 98 308-414 180-279 (326)
62 2acv_A Triterpene UDP-glucosyl 93.4 1 3.5E-05 45.0 13.8 153 294-460 265-430 (463)
63 2vch_A Hydroquinone glucosyltr 93.0 0.58 2E-05 47.1 11.3 140 306-456 268-429 (480)
64 3ty2_A 5'-nucleotidase SURE; s 92.7 0.093 3.2E-06 47.5 4.3 46 1-54 4-49 (261)
65 2jzc_A UDP-N-acetylglucosamine 90.1 0.39 1.3E-05 42.8 5.6 45 365-415 115-160 (224)
66 3l7i_A Teichoic acid biosynthe 88.8 1.7 5.7E-05 46.2 10.3 174 290-487 523-716 (729)
67 4gi5_A Quinone reductase; prot 83.7 1.4 4.9E-05 40.6 5.6 44 3-50 17-61 (280)
68 4b4o_A Epimerase family protei 82.6 1 3.6E-05 41.7 4.3 33 9-51 1-33 (298)
69 3hly_A Flavodoxin-like domain; 74.4 4.2 0.00014 33.8 5.2 38 9-51 1-38 (161)
70 2pq6_A UDP-glucuronosyl/UDP-gl 74.0 3 0.0001 41.8 4.9 45 1-51 1-45 (482)
71 2phj_A 5'-nucleotidase SURE; S 73.7 2.9 9.9E-05 37.6 4.1 38 9-54 2-39 (251)
72 3grc_A Sensor protein, kinase; 73.2 30 0.001 26.9 11.6 113 336-455 6-126 (140)
73 1wcv_1 SOJ, segregation protei 72.8 4 0.00014 36.8 5.1 41 5-51 2-44 (257)
74 2d1p_A TUSD, hypothetical UPF0 72.8 7 0.00024 31.7 6.0 42 7-51 11-53 (140)
75 2e6c_A 5'-nucleotidase SURE; S 72.6 3.1 0.00011 37.3 4.1 38 9-54 1-38 (244)
76 2zay_A Response regulator rece 71.8 22 0.00075 28.0 9.0 112 336-455 8-127 (147)
77 1j9j_A Stationary phase surviV 71.8 3.4 0.00012 37.1 4.1 38 9-54 1-38 (247)
78 2hy5_A Putative sulfurtransfer 71.6 7.3 0.00025 31.0 5.8 41 9-52 1-42 (130)
79 3lqk_A Dipicolinate synthase s 71.0 3.7 0.00013 35.7 4.1 41 4-52 3-45 (201)
80 1l5x_A SurviVal protein E; str 69.8 4 0.00014 37.4 4.2 38 9-54 1-38 (280)
81 3f6r_A Flavodoxin; FMN binding 68.9 6.6 0.00022 31.8 5.1 38 9-51 2-39 (148)
82 1xv5_A AGT, DNA alpha-glucosyl 68.5 57 0.0019 28.0 24.6 158 310-469 200-380 (401)
83 2v4n_A Multifunctional protein 68.0 4.8 0.00016 36.3 4.3 39 8-54 1-39 (254)
84 3to5_A CHEY homolog; alpha(5)b 67.3 45 0.0015 26.4 10.6 114 335-455 11-132 (134)
85 1f4p_A Flavodoxin; electron tr 66.1 7.3 0.00025 31.5 4.9 38 9-51 1-38 (147)
86 3nbm_A PTS system, lactose-spe 66.0 11 0.00036 29.0 5.4 42 6-53 4-45 (108)
87 2vch_A Hydroquinone glucosyltr 65.4 5 0.00017 40.1 4.3 41 6-52 4-45 (480)
88 3jte_A Response regulator rece 65.1 47 0.0016 25.8 10.6 112 337-456 4-123 (143)
89 2pln_A HP1043, response regula 64.4 47 0.0016 25.6 10.7 109 336-455 18-132 (137)
90 3mcu_A Dipicolinate synthase, 63.4 6.6 0.00022 34.2 4.1 36 8-51 5-42 (207)
91 2qzj_A Two-component response 61.7 47 0.0016 25.7 9.0 112 336-455 4-120 (136)
92 3h1g_A Chemotaxis protein CHEY 61.6 51 0.0018 25.1 11.1 112 337-455 6-126 (129)
93 3ew7_A LMO0794 protein; Q8Y8U8 61.4 7.4 0.00025 33.7 4.3 33 9-51 1-33 (221)
94 3h2s_A Putative NADH-flavin re 60.8 7.7 0.00026 33.7 4.3 33 9-51 1-33 (224)
95 1rpn_A GDP-mannose 4,6-dehydra 60.6 7.9 0.00027 36.2 4.6 39 3-51 9-47 (335)
96 3k9g_A PF-32 protein; ssgcid, 59.7 6.3 0.00022 35.6 3.6 42 3-51 21-64 (267)
97 2rjn_A Response regulator rece 59.0 65 0.0022 25.4 10.0 113 336-456 7-126 (154)
98 3kjh_A CO dehydrogenase/acetyl 59.0 8.3 0.00029 34.2 4.3 36 9-52 1-38 (254)
99 4dad_A Putative pilus assembly 58.6 56 0.0019 25.5 9.0 70 383-455 67-140 (146)
100 4dzz_A Plasmid partitioning pr 58.3 9 0.00031 32.8 4.2 37 9-51 1-39 (206)
101 3gd5_A Otcase, ornithine carba 57.3 65 0.0022 30.0 10.0 104 259-392 128-234 (323)
102 3h5i_A Response regulator/sens 56.9 66 0.0023 24.9 13.1 112 336-455 5-123 (140)
103 3gt7_A Sensor protein; structu 56.8 72 0.0025 25.3 9.5 112 336-455 7-126 (154)
104 3hdg_A Uncharacterized protein 56.7 65 0.0022 24.7 9.2 112 336-455 7-124 (137)
105 2ph1_A Nucleotide-binding prot 56.6 12 0.00041 33.7 5.0 39 7-51 16-56 (262)
106 3n53_A Response regulator rece 56.2 67 0.0023 24.8 11.1 111 337-456 4-122 (140)
107 1qkk_A DCTD, C4-dicarboxylate 56.0 69 0.0024 25.3 9.3 113 337-457 4-122 (155)
108 1sbz_A Probable aromatic acid 56.0 11 0.00039 32.4 4.3 35 9-51 1-37 (197)
109 3heb_A Response regulator rece 55.8 73 0.0025 25.0 10.6 111 336-453 4-132 (152)
110 3cg4_A Response regulator rece 55.7 69 0.0023 24.7 11.7 111 336-454 7-125 (142)
111 2ark_A Flavodoxin; FMN, struct 55.4 14 0.00048 31.3 4.9 40 7-51 3-43 (188)
112 2x4g_A Nucleoside-diphosphate- 55.2 10 0.00035 35.5 4.4 34 8-51 13-46 (342)
113 2zki_A 199AA long hypothetical 54.7 14 0.00047 31.6 4.8 38 8-51 4-41 (199)
114 2afh_E Nitrogenase iron protei 54.3 12 0.00041 34.2 4.6 37 8-51 1-39 (289)
115 3lua_A Response regulator rece 54.1 62 0.0021 25.0 8.5 115 336-457 4-128 (140)
116 4f3y_A DHPR, dihydrodipicolina 54.1 9.6 0.00033 34.8 3.7 44 377-422 67-110 (272)
117 1kjn_A MTH0777; hypotethical p 54.0 27 0.00093 28.3 5.8 41 6-50 4-44 (157)
118 3gl9_A Response regulator; bet 53.4 69 0.0024 24.1 10.6 110 338-455 4-121 (122)
119 3r6d_A NAD-dependent epimerase 53.4 16 0.00054 31.7 5.1 35 8-51 4-39 (221)
120 1ydg_A Trp repressor binding p 53.3 19 0.00066 31.0 5.6 40 7-51 5-44 (211)
121 3ilh_A Two component response 53.2 76 0.0026 24.5 11.9 113 337-457 10-140 (146)
122 2a5l_A Trp repressor binding p 53.2 19 0.00065 30.6 5.5 38 9-51 6-43 (200)
123 3dqp_A Oxidoreductase YLBE; al 53.0 9.5 0.00032 33.1 3.5 33 9-51 1-33 (219)
124 3hzh_A Chemotaxis response reg 52.8 85 0.0029 24.9 11.0 69 384-455 84-156 (157)
125 3hdv_A Response regulator; PSI 52.7 75 0.0026 24.3 10.6 114 336-457 7-128 (136)
126 1jx7_A Hypothetical protein YC 52.7 21 0.00073 27.2 5.2 41 9-52 2-44 (117)
127 3bfv_A CAPA1, CAPB2, membrane 52.4 15 0.0005 33.5 4.8 40 6-51 79-120 (271)
128 3kht_A Response regulator; PSI 51.9 81 0.0028 24.4 11.7 113 336-454 5-126 (144)
129 2j48_A Two-component sensor ki 51.8 67 0.0023 23.4 9.9 106 338-455 3-117 (119)
130 1dbw_A Transcriptional regulat 51.7 74 0.0025 23.9 9.7 112 336-455 3-120 (126)
131 2l2q_A PTS system, cellobiose- 51.6 21 0.0007 27.3 4.8 41 7-53 3-43 (109)
132 3tem_A Ribosyldihydronicotinam 51.4 18 0.00061 32.0 5.0 40 8-51 1-41 (228)
133 3hv2_A Response regulator/HD d 51.3 87 0.003 24.6 9.7 69 384-455 59-132 (153)
134 3m6m_D Sensory/regulatory prot 51.3 85 0.0029 24.4 10.3 112 336-455 14-135 (143)
135 3fni_A Putative diflavin flavo 51.2 29 0.00098 28.5 6.0 38 9-51 5-42 (159)
136 1lss_A TRK system potassium up 51.1 17 0.0006 28.5 4.6 32 8-50 4-35 (140)
137 3nhm_A Response regulator; pro 50.7 79 0.0027 24.0 12.3 110 337-456 5-122 (133)
138 1hdo_A Biliverdin IX beta redu 50.7 17 0.00057 30.9 4.7 33 9-51 4-36 (206)
139 3e8x_A Putative NAD-dependent 50.5 15 0.00051 32.3 4.4 35 7-51 20-54 (236)
140 1k68_A Phytochrome response re 50.4 81 0.0028 24.0 11.4 111 337-454 3-129 (140)
141 3mc3_A DSRE/DSRF-like family p 50.3 31 0.0011 27.4 5.9 44 7-53 14-57 (134)
142 1cp2_A CP2, nitrogenase iron p 50.2 14 0.00046 33.3 4.2 36 9-51 1-38 (269)
143 3zq6_A Putative arsenical pump 50.0 18 0.0006 33.9 5.0 40 7-52 11-52 (324)
144 1jbe_A Chemotaxis protein CHEY 49.8 80 0.0027 23.7 10.0 112 336-454 4-123 (128)
145 2hna_A Protein MIOC, flavodoxi 49.6 18 0.0006 29.2 4.4 36 9-49 2-37 (147)
146 2q62_A ARSH; alpha/beta, flavo 49.5 23 0.0008 31.7 5.5 44 4-50 30-73 (247)
147 3pg5_A Uncharacterized protein 49.2 16 0.00055 34.8 4.7 37 9-51 1-39 (361)
148 2hy5_B Intracellular sulfur ox 49.0 23 0.00079 28.4 4.9 42 8-52 4-46 (136)
149 4e7p_A Response regulator; DNA 49.0 94 0.0032 24.3 12.3 114 337-456 21-140 (150)
150 3end_A Light-independent proto 48.7 16 0.00056 33.6 4.6 39 6-51 38-78 (307)
151 3nvt_A 3-deoxy-D-arabino-heptu 48.5 1.7E+02 0.0059 27.9 11.7 91 321-414 154-256 (385)
152 3cnb_A DNA-binding response re 48.4 90 0.0031 23.9 11.1 114 336-456 8-130 (143)
153 1bvy_F Protein (cytochrome P45 48.2 18 0.00062 30.9 4.4 39 8-51 21-59 (191)
154 4ep1_A Otcase, ornithine carba 48.2 1.1E+02 0.0038 28.7 10.0 104 259-392 150-256 (340)
155 1ykg_A SIR-FP, sulfite reducta 47.8 13 0.00045 30.8 3.4 39 8-51 9-47 (167)
156 2dkn_A 3-alpha-hydroxysteroid 47.7 18 0.00062 31.9 4.6 34 9-51 1-34 (255)
157 3b6i_A Flavoprotein WRBA; flav 47.3 23 0.00078 30.0 5.0 38 9-51 2-40 (198)
158 2qr3_A Two-component system re 47.0 94 0.0032 23.7 9.4 112 337-456 4-126 (140)
159 3hr4_A Nitric oxide synthase, 46.7 15 0.0005 32.4 3.6 45 1-51 33-77 (219)
160 1fjh_A 3alpha-hydroxysteroid d 46.4 20 0.00068 31.9 4.6 34 9-51 1-34 (257)
161 3ruf_A WBGU; rossmann fold, UD 46.4 10 0.00035 35.7 2.8 37 6-52 23-59 (351)
162 2i6u_A Otcase, ornithine carba 45.6 1.6E+02 0.0056 27.1 10.7 105 259-392 119-226 (307)
163 2d1p_B TUSC, hypothetical UPF0 45.5 31 0.0011 26.7 5.1 40 10-52 3-42 (119)
164 3q9l_A Septum site-determining 45.5 20 0.00068 31.9 4.5 38 9-52 2-41 (260)
165 3i42_A Response regulator rece 45.3 94 0.0032 23.3 10.0 111 337-456 4-122 (127)
166 3eul_A Possible nitrate/nitrit 45.1 1.1E+02 0.0037 23.9 10.6 116 336-457 15-136 (152)
167 3kl4_A SRP54, signal recogniti 44.9 1.7E+02 0.0059 28.4 11.3 83 396-484 254-339 (433)
168 3i6i_A Putative leucoanthocyan 44.6 17 0.00057 34.2 4.0 35 8-52 10-44 (346)
169 3ug7_A Arsenical pump-driving 44.3 27 0.00092 33.0 5.4 41 6-52 22-64 (349)
170 2pzm_A Putative nucleotide sug 44.1 18 0.00062 33.7 4.1 38 4-51 16-53 (330)
171 3vps_A TUNA, NAD-dependent epi 44.1 19 0.00066 33.0 4.3 28 25-52 14-41 (321)
172 3eod_A Protein HNR; response r 44.0 1E+02 0.0034 23.2 9.4 113 336-456 7-126 (130)
173 3m2p_A UDP-N-acetylglucosamine 43.9 20 0.0007 32.9 4.4 27 25-51 9-35 (311)
174 2qyt_A 2-dehydropantoate 2-red 43.8 15 0.00051 34.0 3.4 36 4-50 4-45 (317)
175 3ea0_A ATPase, para family; al 43.7 18 0.00062 31.8 3.9 39 7-51 2-43 (245)
176 3t6k_A Response regulator rece 43.6 1.1E+02 0.0037 23.5 10.6 112 337-456 5-124 (136)
177 3cio_A ETK, tyrosine-protein k 43.6 25 0.00086 32.4 4.9 41 6-52 101-143 (299)
178 3dhn_A NAD-dependent epimerase 43.5 23 0.00079 30.6 4.5 27 25-51 11-37 (227)
179 3guy_A Short-chain dehydrogena 43.5 19 0.00064 31.5 3.9 34 9-51 1-34 (230)
180 1dcf_A ETR1 protein; beta-alph 43.3 1.1E+02 0.0037 23.3 8.5 113 336-456 7-129 (136)
181 3dff_A Teicoplanin pseudoaglyc 43.1 35 0.0012 31.0 5.8 41 8-54 7-47 (273)
182 2r85_A PURP protein PF1517; AT 43.0 19 0.00063 33.6 4.0 32 8-51 2-33 (334)
183 3c3m_A Response regulator rece 42.9 1.1E+02 0.0038 23.4 10.9 113 337-457 4-124 (138)
184 4hb9_A Similarities with proba 42.8 24 0.00082 33.7 4.9 30 8-48 1-30 (412)
185 2rh8_A Anthocyanidin reductase 42.8 23 0.00079 32.9 4.6 25 24-51 18-42 (338)
186 2qxy_A Response regulator; reg 42.8 1.1E+02 0.0036 23.6 8.2 114 336-457 4-122 (142)
187 3fkq_A NTRC-like two-domain pr 42.7 22 0.00075 34.0 4.5 41 5-51 139-181 (373)
188 1hyq_A MIND, cell division inh 42.4 24 0.00083 31.5 4.6 37 9-51 2-40 (263)
189 3ego_A Probable 2-dehydropanto 42.3 22 0.00074 33.0 4.3 32 8-51 2-33 (307)
190 2acv_A Triterpene UDP-glucosyl 42.3 17 0.00059 36.0 3.8 41 7-53 8-50 (463)
191 2xj4_A MIPZ; replication, cell 42.2 24 0.00082 32.2 4.5 37 9-51 4-42 (286)
192 2q1s_A Putative nucleotide sug 42.1 25 0.00086 33.4 4.9 25 24-51 41-66 (377)
193 3f6c_A Positive transcription 42.1 1.1E+02 0.0038 23.1 11.2 114 337-456 2-120 (134)
194 1vl0_A DTDP-4-dehydrorhamnose 42.0 13 0.00046 33.7 2.8 39 3-51 7-45 (292)
195 2c5a_A GDP-mannose-3', 5'-epim 42.0 29 0.00098 33.0 5.3 25 24-51 38-62 (379)
196 2w37_A Ornithine carbamoyltran 41.8 1.5E+02 0.005 28.1 9.9 105 259-392 147-254 (359)
197 2qsj_A DNA-binding response re 41.8 1.2E+02 0.0042 23.6 11.0 113 337-456 4-124 (154)
198 2gkg_A Response regulator homo 41.7 1E+02 0.0036 22.8 10.9 111 337-456 6-125 (127)
199 3oh8_A Nucleoside-diphosphate 41.6 25 0.00087 35.2 5.0 35 8-52 147-181 (516)
200 3p0r_A Azoreductase; structura 41.5 31 0.0011 29.8 5.0 43 7-51 3-48 (211)
201 3hn2_A 2-dehydropantoate 2-red 41.4 21 0.00071 33.2 4.0 33 8-51 2-34 (312)
202 3g17_A Similar to 2-dehydropan 41.3 15 0.00051 33.8 3.0 33 8-51 2-34 (294)
203 1p9o_A Phosphopantothenoylcyst 41.3 29 0.001 32.2 4.9 25 28-52 65-89 (313)
204 3cfy_A Putative LUXO repressor 41.3 1.2E+02 0.0041 23.3 9.3 110 338-455 6-121 (137)
205 3ijp_A DHPR, dihydrodipicolina 41.3 23 0.0008 32.5 4.2 43 377-421 82-124 (288)
206 3ko8_A NAD-dependent epimerase 41.2 25 0.00084 32.2 4.5 33 9-51 1-33 (312)
207 2vns_A Metalloreductase steap3 41.0 25 0.00085 30.6 4.2 34 6-50 26-59 (215)
208 3qvo_A NMRA family protein; st 40.9 20 0.00067 31.5 3.6 35 8-51 22-57 (236)
209 1g3q_A MIND ATPase, cell divis 40.8 27 0.00091 30.5 4.5 38 9-52 2-41 (237)
210 3zqu_A Probable aromatic acid 40.7 41 0.0014 29.2 5.4 35 9-51 5-40 (209)
211 2jba_A Phosphate regulon trans 40.6 90 0.0031 23.3 7.3 111 337-455 3-121 (127)
212 1mvl_A PPC decarboxylase athal 40.6 27 0.00091 30.4 4.2 35 8-51 19-54 (209)
213 2gk4_A Conserved hypothetical 40.2 28 0.00096 30.8 4.4 25 24-51 28-52 (232)
214 3eag_A UDP-N-acetylmuramate:L- 40.2 30 0.001 32.3 4.9 33 7-49 3-35 (326)
215 1p6q_A CHEY2; chemotaxis, sign 39.9 1.1E+02 0.0038 22.9 7.8 111 337-454 7-125 (129)
216 3cz5_A Two-component response 39.6 1.3E+02 0.0046 23.4 9.3 114 336-456 5-125 (153)
217 3fgn_A Dethiobiotin synthetase 39.4 51 0.0018 29.4 6.1 41 6-50 23-63 (251)
218 1iow_A DD-ligase, DDLB, D-ALA\ 39.3 22 0.00076 32.5 3.9 39 8-51 2-43 (306)
219 4g65_A TRK system potassium up 39.3 10 0.00035 37.6 1.6 64 351-415 267-333 (461)
220 3l77_A Short-chain alcohol deh 39.3 31 0.001 30.1 4.6 34 9-51 2-35 (235)
221 4eg0_A D-alanine--D-alanine li 39.3 22 0.00074 33.0 3.8 44 5-50 10-53 (317)
222 3i83_A 2-dehydropantoate 2-red 39.2 25 0.00086 32.7 4.2 33 8-51 2-34 (320)
223 2wqk_A 5'-nucleotidase SURE; S 38.8 27 0.00093 31.3 4.1 38 9-54 2-39 (251)
224 3qjg_A Epidermin biosynthesis 38.7 27 0.00092 29.4 3.9 35 9-51 6-41 (175)
225 3d7l_A LIN1944 protein; APC893 38.6 25 0.00085 29.8 3.8 34 7-51 2-35 (202)
226 1duv_G Octase-1, ornithine tra 38.5 1.9E+02 0.0065 27.0 10.0 106 259-392 124-233 (333)
227 1t5b_A Acyl carrier protein ph 38.4 37 0.0013 28.7 4.9 41 9-51 2-44 (201)
228 1e2b_A Enzyme IIB-cellobiose; 38.4 67 0.0023 24.3 5.8 40 9-54 4-43 (106)
229 1tvm_A PTS system, galactitol- 38.3 77 0.0026 24.2 6.3 41 7-53 20-61 (113)
230 3rqi_A Response regulator prot 38.3 1.1E+02 0.0038 25.1 8.0 112 336-455 7-124 (184)
231 3dfi_A Pseudoaglycone deacetyl 38.2 53 0.0018 29.7 6.1 42 7-54 6-47 (270)
232 3bbn_B Ribosomal protein S2; s 38.2 2.1E+02 0.007 25.1 9.6 28 384-413 158-186 (231)
233 2vzf_A NADH-dependent FMN redu 38.0 38 0.0013 28.8 4.9 39 9-50 3-42 (197)
234 1t0i_A YLR011WP; FMN binding p 37.9 48 0.0016 27.8 5.6 40 9-51 1-46 (191)
235 3rd5_A Mypaa.01249.C; ssgcid, 37.8 33 0.0011 31.2 4.8 33 10-51 17-49 (291)
236 3l4b_C TRKA K+ channel protien 37.8 33 0.0011 29.6 4.6 25 27-51 8-32 (218)
237 3iqw_A Tail-anchored protein t 37.7 23 0.00079 33.3 3.7 38 7-51 14-53 (334)
238 1vlv_A Otcase, ornithine carba 37.7 2.4E+02 0.0082 26.2 10.5 105 259-392 138-245 (325)
239 3of5_A Dethiobiotin synthetase 37.5 56 0.0019 28.6 6.0 40 7-50 2-41 (228)
240 1vl8_A Gluconate 5-dehydrogena 37.3 38 0.0013 30.4 5.0 34 9-51 21-54 (267)
241 3cwq_A Para family chromosome 36.9 28 0.00095 30.0 3.9 26 25-51 10-37 (209)
242 3rpe_A MDAB, modulator of drug 36.8 52 0.0018 28.7 5.6 42 8-51 25-69 (218)
243 3ph3_A Ribose-5-phosphate isom 35.9 46 0.0016 27.7 4.7 37 6-50 18-54 (169)
244 3cg0_A Response regulator rece 35.9 1.4E+02 0.0049 22.6 11.3 113 336-455 9-127 (140)
245 3r6w_A FMN-dependent NADH-azor 35.8 37 0.0013 29.2 4.6 41 9-51 2-44 (212)
246 1ks9_A KPA reductase;, 2-dehyd 35.6 33 0.0011 31.0 4.4 32 9-51 1-32 (291)
247 1pvv_A Otcase, ornithine carba 35.6 1.9E+02 0.0065 26.7 9.5 104 259-392 126-232 (315)
248 3lte_A Response regulator; str 35.6 1.4E+02 0.0048 22.4 10.8 113 336-456 6-125 (132)
249 1bg6_A N-(1-D-carboxylethyl)-L 35.5 33 0.0011 32.2 4.5 32 8-50 4-35 (359)
250 1lld_A L-lactate dehydrogenase 35.4 34 0.0012 31.6 4.5 35 6-51 5-41 (319)
251 1k66_A Phytochrome response re 35.2 1.5E+02 0.0051 22.7 10.5 112 336-454 6-136 (149)
252 1sqs_A Conserved hypothetical 35.0 43 0.0015 29.6 4.9 40 9-51 2-42 (242)
253 2pk3_A GDP-6-deoxy-D-LYXO-4-he 34.9 39 0.0013 31.0 4.8 25 24-51 21-45 (321)
254 2m1z_A LMO0427 protein; homolo 34.7 76 0.0026 24.1 5.4 40 8-52 2-43 (106)
255 3f6p_A Transcriptional regulat 34.7 1.4E+02 0.0047 22.1 10.8 111 337-455 3-118 (120)
256 2ydy_A Methionine adenosyltran 34.7 29 0.00098 31.8 3.8 32 9-50 3-34 (315)
257 3k96_A Glycerol-3-phosphate de 34.7 31 0.0011 32.8 4.1 34 7-51 28-61 (356)
258 1d4a_A DT-diaphorase, quinone 34.5 52 0.0018 29.8 5.5 39 9-51 3-42 (273)
259 1fmc_A 7 alpha-hydroxysteroid 34.5 35 0.0012 30.1 4.3 24 24-50 20-43 (255)
260 1gsa_A Glutathione synthetase; 34.4 45 0.0015 30.4 5.2 40 9-51 2-41 (316)
261 2hpv_A FMN-dependent NADH-azor 34.4 46 0.0016 28.4 4.9 41 9-51 2-45 (208)
262 4id9_A Short-chain dehydrogena 33.9 33 0.0011 32.0 4.2 35 7-51 18-52 (347)
263 2p5y_A UDP-glucose 4-epimerase 33.8 29 0.001 31.7 3.7 24 24-50 9-32 (311)
264 2fzv_A Putative arsenical resi 33.7 53 0.0018 29.9 5.3 42 6-51 56-98 (279)
265 3c97_A Signal transduction his 33.6 1.6E+02 0.0054 22.5 12.7 109 336-455 10-129 (140)
266 3qxc_A Dethiobiotin synthetase 33.6 67 0.0023 28.5 5.9 41 6-50 18-58 (242)
267 2ew2_A 2-dehydropantoate 2-red 33.5 37 0.0013 31.1 4.4 32 8-50 3-34 (316)
268 1i3c_A Response regulator RCP1 33.4 1.7E+02 0.0057 22.7 11.8 113 336-454 8-135 (149)
269 2woj_A ATPase GET3; tail-ancho 33.2 38 0.0013 32.1 4.5 39 7-52 16-58 (354)
270 5nul_A Flavodoxin; electron tr 33.2 40 0.0014 26.5 4.0 29 23-51 8-36 (138)
271 1mb3_A Cell division response 33.1 1.5E+02 0.005 21.9 10.3 110 338-455 3-120 (124)
272 3l6e_A Oxidoreductase, short-c 33.1 44 0.0015 29.2 4.7 34 9-51 3-36 (235)
273 2a35_A Hypothetical protein PA 32.9 33 0.0011 29.2 3.7 35 7-51 4-40 (215)
274 1rkx_A CDP-glucose-4,6-dehydra 32.9 42 0.0014 31.4 4.8 34 8-51 9-42 (357)
275 1jay_A Coenzyme F420H2:NADP+ o 32.8 37 0.0013 29.1 4.0 32 9-50 1-32 (212)
276 2hqr_A Putative transcriptiona 32.8 1.4E+02 0.0049 25.2 8.0 108 338-456 2-115 (223)
277 1mxh_A Pteridine reductase 2; 32.7 33 0.0011 30.8 3.9 32 10-50 12-43 (276)
278 1xg5_A ARPG836; short chain de 32.6 50 0.0017 29.7 5.0 32 10-50 33-64 (279)
279 3awd_A GOX2181, putative polyo 32.5 51 0.0018 29.1 5.1 33 10-51 14-46 (260)
280 2r6j_A Eugenol synthase 1; phe 32.4 27 0.00093 32.1 3.3 26 24-52 20-45 (318)
281 1udb_A Epimerase, UDP-galactos 32.3 35 0.0012 31.6 4.1 24 24-50 9-32 (338)
282 2wsb_A Galactitol dehydrogenas 32.3 58 0.002 28.6 5.4 33 10-51 12-44 (254)
283 1zq6_A Otcase, ornithine carba 32.3 3.1E+02 0.011 25.8 10.4 93 291-392 175-274 (359)
284 1zmt_A Haloalcohol dehalogenas 32.3 21 0.00071 31.9 2.3 33 9-50 1-33 (254)
285 2q1w_A Putative nucleotide sug 32.1 44 0.0015 31.0 4.7 25 24-51 30-54 (333)
286 3kcn_A Adenylate cyclase homol 32.1 1.8E+02 0.0061 22.6 10.9 114 336-458 4-125 (151)
287 2zat_A Dehydrogenase/reductase 32.0 44 0.0015 29.7 4.5 32 10-50 15-46 (260)
288 3orf_A Dihydropteridine reduct 32.0 54 0.0018 29.0 5.1 34 10-52 23-56 (251)
289 2z1m_A GDP-D-mannose dehydrata 31.8 38 0.0013 31.3 4.2 34 8-51 3-36 (345)
290 1byi_A Dethiobiotin synthase; 31.7 46 0.0016 28.7 4.5 25 25-49 11-37 (224)
291 3crn_A Response regulator rece 31.7 1.7E+02 0.0057 22.1 11.1 111 337-455 4-120 (132)
292 3slg_A PBGP3 protein; structur 31.5 41 0.0014 31.7 4.4 26 24-52 33-59 (372)
293 3dfu_A Uncharacterized protein 31.4 27 0.00093 30.9 2.8 34 6-50 4-37 (232)
294 3i4f_A 3-oxoacyl-[acyl-carrier 31.4 41 0.0014 29.9 4.2 35 8-51 6-40 (264)
295 3o38_A Short chain dehydrogena 31.3 65 0.0022 28.6 5.6 34 9-51 22-56 (266)
296 3klo_A Transcriptional regulat 31.3 2.1E+02 0.0072 24.2 8.9 114 337-455 8-128 (225)
297 1n7h_A GDP-D-mannose-4,6-dehyd 31.2 44 0.0015 31.6 4.6 25 24-51 37-61 (381)
298 3r0j_A Possible two component 31.2 2.6E+02 0.0088 24.2 11.3 111 337-455 24-140 (250)
299 1ek6_A UDP-galactose 4-epimera 31.1 40 0.0014 31.3 4.3 25 24-51 11-35 (348)
300 1yde_A Retinal dehydrogenase/r 31.0 54 0.0019 29.4 5.0 32 10-50 10-41 (270)
301 3bq9_A Predicted rossmann fold 30.9 3.8E+02 0.013 26.1 13.5 77 376-456 238-332 (460)
302 1y1p_A ARII, aldehyde reductas 30.9 44 0.0015 30.8 4.5 24 24-50 20-43 (342)
303 2c20_A UDP-glucose 4-epimerase 30.9 45 0.0015 30.7 4.5 27 25-51 8-34 (330)
304 3f2v_A General stress protein 30.8 34 0.0012 29.2 3.3 37 9-50 2-38 (192)
305 3ghy_A Ketopantoate reductase 30.8 39 0.0013 31.6 4.1 32 8-50 3-34 (335)
306 1orr_A CDP-tyvelose-2-epimeras 30.8 44 0.0015 30.9 4.5 24 24-50 10-33 (347)
307 3op4_A 3-oxoacyl-[acyl-carrier 30.8 52 0.0018 29.0 4.8 33 9-50 9-41 (248)
308 3enk_A UDP-glucose 4-epimerase 30.8 47 0.0016 30.8 4.6 34 8-51 5-38 (341)
309 2woo_A ATPase GET3; tail-ancho 30.6 46 0.0016 31.1 4.5 37 8-51 18-56 (329)
310 1xgk_A Nitrogen metabolite rep 30.5 42 0.0014 31.6 4.3 34 8-51 5-38 (352)
311 1cyd_A Carbonyl reductase; sho 30.5 55 0.0019 28.5 4.8 24 24-50 16-39 (244)
312 2b69_A UDP-glucuronate decarbo 30.5 46 0.0016 30.9 4.6 25 24-51 36-60 (343)
313 1evy_A Glycerol-3-phosphate de 30.4 29 0.00099 32.9 3.1 37 4-51 10-47 (366)
314 2ixd_A LMBE-related protein; h 30.3 73 0.0025 28.2 5.6 42 7-54 2-43 (242)
315 1t2a_A GDP-mannose 4,6 dehydra 30.3 47 0.0016 31.3 4.6 25 24-51 33-57 (375)
316 3q9s_A DNA-binding response re 30.2 2.2E+02 0.0077 24.7 9.0 69 384-455 82-153 (249)
317 3g0o_A 3-hydroxyisobutyrate de 30.1 48 0.0016 30.4 4.5 34 6-50 5-38 (303)
318 3ppi_A 3-hydroxyacyl-COA dehyd 30.0 59 0.002 29.2 5.1 32 10-50 31-62 (281)
319 3e48_A Putative nucleoside-dip 29.9 38 0.0013 30.6 3.7 33 9-51 1-34 (289)
320 1dxh_A Ornithine carbamoyltran 29.7 1.5E+02 0.0052 27.7 7.8 105 259-392 125-233 (335)
321 3k3p_A D-alanine--D-alanine li 29.7 24 0.00082 33.9 2.4 49 1-51 30-78 (383)
322 2gwr_A DNA-binding response re 29.6 2.6E+02 0.009 23.8 12.2 112 337-455 6-121 (238)
323 3gpi_A NAD-dependent epimerase 29.6 54 0.0018 29.5 4.7 34 8-52 3-36 (286)
324 3czc_A RMPB; alpha/beta sandwi 29.4 78 0.0027 24.0 4.9 36 8-50 18-56 (110)
325 3igf_A ALL4481 protein; two-do 29.4 57 0.0019 31.2 4.9 35 9-50 2-38 (374)
326 2ejb_A Probable aromatic acid 29.2 81 0.0028 26.8 5.4 34 10-51 3-37 (189)
327 4e3z_A Putative oxidoreductase 29.1 45 0.0015 29.9 4.1 34 8-50 25-58 (272)
328 2r8r_A Sensor protein; KDPD, P 29.1 52 0.0018 29.0 4.2 27 25-51 15-43 (228)
329 3fwz_A Inner membrane protein 29.1 35 0.0012 27.1 3.0 25 27-51 15-39 (140)
330 2fb6_A Conserved hypothetical 29.0 45 0.0016 25.8 3.5 39 9-51 8-48 (117)
331 1ys7_A Transcriptional regulat 28.9 2.6E+02 0.009 23.6 13.0 111 336-454 7-123 (233)
332 1ihu_A Arsenical pump-driving 28.9 56 0.0019 33.3 5.2 42 4-52 3-46 (589)
333 3k31_A Enoyl-(acyl-carrier-pro 28.8 84 0.0029 28.6 6.0 34 9-51 30-65 (296)
334 1e6u_A GDP-fucose synthetase; 28.8 30 0.001 31.8 2.9 33 8-50 3-35 (321)
335 1kgs_A DRRD, DNA binding respo 28.7 2.6E+02 0.0089 23.4 11.6 110 337-454 3-118 (225)
336 3r5x_A D-alanine--D-alanine li 28.7 40 0.0014 30.9 3.7 43 7-51 2-44 (307)
337 4egb_A DTDP-glucose 4,6-dehydr 28.7 35 0.0012 31.8 3.4 27 25-51 31-57 (346)
338 4dyv_A Short-chain dehydrogena 28.5 47 0.0016 29.9 4.1 33 9-50 28-60 (272)
339 1i24_A Sulfolipid biosynthesis 28.5 43 0.0015 31.9 4.1 26 25-50 18-43 (404)
340 1db3_A GDP-mannose 4,6-dehydra 28.3 49 0.0017 31.0 4.4 25 24-51 10-34 (372)
341 3sxp_A ADP-L-glycero-D-mannohe 28.3 76 0.0026 29.7 5.7 35 7-51 9-45 (362)
342 3lcm_A SMU.1420, putative oxid 28.3 51 0.0017 28.0 4.0 38 9-51 1-39 (196)
343 3rft_A Uronate dehydrogenase; 28.1 31 0.0011 30.9 2.8 34 9-51 3-36 (267)
344 4hs4_A Chromate reductase; tri 28.1 35 0.0012 29.3 2.9 38 7-48 5-43 (199)
345 1gy8_A UDP-galactose 4-epimera 27.9 54 0.0018 31.2 4.6 34 8-51 2-36 (397)
346 1p9l_A Dihydrodipicolinate red 27.8 2.3E+02 0.0078 25.0 8.4 80 338-422 2-82 (245)
347 1qyd_A Pinoresinol-lariciresin 27.8 34 0.0011 31.3 3.0 34 8-51 4-37 (313)
348 1id1_A Putative potassium chan 27.8 38 0.0013 27.3 3.0 24 28-51 12-35 (153)
349 4egs_A Ribose 5-phosphate isom 27.8 86 0.0029 26.3 5.3 42 4-51 30-72 (180)
350 1srr_A SPO0F, sporulation resp 27.8 1.8E+02 0.0063 21.4 10.6 111 337-455 4-120 (124)
351 2d1y_A Hypothetical protein TT 27.8 73 0.0025 28.1 5.2 33 10-51 7-39 (256)
352 1tmy_A CHEY protein, TMY; chem 27.2 1.8E+02 0.0063 21.2 10.0 111 337-454 3-119 (120)
353 3tpf_A Otcase, ornithine carba 27.1 3.1E+02 0.011 25.2 9.3 104 259-392 116-223 (307)
354 2wyu_A Enoyl-[acyl carrier pro 27.1 65 0.0022 28.6 4.7 33 10-51 9-43 (261)
355 3u7i_A FMN-dependent NADH-azor 27.0 82 0.0028 27.4 5.2 43 7-51 3-50 (223)
356 1u7z_A Coenzyme A biosynthesis 26.9 68 0.0023 28.2 4.6 25 24-51 33-57 (226)
357 1zh2_A KDP operon transcriptio 26.9 1.8E+02 0.0063 21.1 9.1 109 338-454 3-116 (121)
358 1dhr_A Dihydropteridine reduct 26.8 70 0.0024 27.9 4.9 34 9-51 7-40 (241)
359 2ph3_A 3-oxoacyl-[acyl carrier 26.7 45 0.0015 29.1 3.5 32 9-49 1-32 (245)
360 3s40_A Diacylglycerol kinase; 26.5 1E+02 0.0034 28.3 6.0 43 8-53 8-50 (304)
361 3snk_A Response regulator CHEY 26.5 81 0.0028 24.1 4.7 112 337-455 15-132 (135)
362 3hwr_A 2-dehydropantoate 2-red 26.5 54 0.0018 30.4 4.2 32 6-48 17-48 (318)
363 1g63_A Epidermin modifying enz 26.5 49 0.0017 28.0 3.5 35 9-51 3-38 (181)
364 2a4k_A 3-oxoacyl-[acyl carrier 26.5 74 0.0025 28.3 5.0 33 10-51 7-39 (263)
365 4had_A Probable oxidoreductase 26.4 97 0.0033 28.9 6.1 88 308-412 24-115 (350)
366 2r25_B Osmosensing histidine p 26.2 2.1E+02 0.0072 21.6 11.1 112 337-455 3-126 (133)
367 1wma_A Carbonyl reductase [NAD 26.2 59 0.002 28.8 4.3 34 9-51 4-38 (276)
368 2pd6_A Estradiol 17-beta-dehyd 26.1 82 0.0028 27.7 5.3 33 10-51 8-40 (264)
369 1p2f_A Response regulator; DRR 26.1 2.5E+02 0.0084 23.5 8.3 108 338-454 4-115 (220)
370 2a9o_A Response regulator; ess 26.0 1.9E+02 0.0065 21.0 11.0 110 338-455 3-117 (120)
371 1rcu_A Conserved hypothetical 25.9 1.1E+02 0.0037 26.1 5.6 38 376-415 111-150 (195)
372 2dtx_A Glucose 1-dehydrogenase 25.8 79 0.0027 28.2 5.1 33 10-51 9-41 (264)
373 4ekn_B Aspartate carbamoyltran 25.8 1.3E+02 0.0046 27.7 6.6 112 259-397 121-233 (306)
374 2cfc_A 2-(R)-hydroxypropyl-COM 25.7 72 0.0025 27.9 4.7 32 10-50 3-34 (250)
375 1zgz_A Torcad operon transcrip 25.7 2E+02 0.0068 21.1 10.7 110 337-454 3-117 (122)
376 2oqr_A Sensory transduction pr 25.6 3E+02 0.01 23.1 9.3 112 337-456 5-121 (230)
377 2pd4_A Enoyl-[acyl-carrier-pro 25.5 84 0.0029 28.1 5.2 33 10-51 7-41 (275)
378 2bll_A Protein YFBG; decarboxy 25.4 57 0.002 30.1 4.2 27 25-51 7-34 (345)
379 1pzg_A LDH, lactate dehydrogen 25.3 61 0.0021 30.3 4.3 34 6-50 7-41 (331)
380 2o4c_A Erythronate-4-phosphate 25.2 2.4E+02 0.0081 26.9 8.4 44 377-422 161-213 (380)
381 2ae2_A Protein (tropinone redu 25.1 85 0.0029 27.7 5.2 32 10-50 10-41 (260)
382 3ic5_A Putative saccharopine d 25.1 95 0.0033 23.0 4.8 33 8-51 5-38 (118)
383 2ayx_A Sensor kinase protein R 25.1 3.4E+02 0.012 23.6 11.4 69 384-455 174-246 (254)
384 3orq_A N5-carboxyaminoimidazol 24.9 90 0.0031 29.6 5.5 38 3-51 7-44 (377)
385 2x5n_A SPRPN10, 26S proteasome 24.8 2E+02 0.0069 24.2 7.2 50 310-362 111-160 (192)
386 3ius_A Uncharacterized conserv 24.8 58 0.002 29.2 4.0 24 28-51 14-37 (286)
387 2rhc_B Actinorhodin polyketide 24.8 85 0.0029 28.2 5.1 32 10-50 23-54 (277)
388 2ag5_A DHRS6, dehydrogenase/re 24.8 77 0.0026 27.8 4.7 32 10-50 7-38 (246)
389 3sju_A Keto reductase; short-c 24.8 72 0.0024 28.7 4.6 33 9-50 24-56 (279)
390 3n7t_A Macrophage binding prot 24.7 1.3E+02 0.0043 26.8 6.1 44 9-52 10-58 (247)
391 2ehd_A Oxidoreductase, oxidore 24.7 78 0.0027 27.3 4.8 24 24-50 14-37 (234)
392 1txg_A Glycerol-3-phosphate de 24.7 51 0.0017 30.5 3.7 31 9-50 1-31 (335)
393 2hun_A 336AA long hypothetical 24.7 53 0.0018 30.3 3.8 34 8-51 3-38 (336)
394 1xq6_A Unknown protein; struct 24.6 85 0.0029 27.2 5.0 25 24-51 13-39 (253)
395 2gdz_A NAD+-dependent 15-hydro 24.5 87 0.003 27.8 5.1 32 10-50 8-39 (267)
396 3la6_A Tyrosine-protein kinase 24.5 1E+02 0.0036 27.9 5.6 41 6-52 89-131 (286)
397 3m1a_A Putative dehydrogenase; 24.4 65 0.0022 28.9 4.2 34 9-51 5-38 (281)
398 1uan_A Hypothetical protein TT 24.4 1.1E+02 0.0039 26.6 5.7 40 9-54 2-41 (227)
399 3ez2_A Plasmid partition prote 24.2 68 0.0023 30.7 4.6 40 6-51 105-152 (398)
400 3rkr_A Short chain oxidoreduct 24.1 76 0.0026 28.2 4.6 32 10-50 30-61 (262)
401 1zco_A 2-dehydro-3-deoxyphosph 24.0 3.8E+02 0.013 23.8 11.2 95 317-414 31-137 (262)
402 2x6t_A ADP-L-glycero-D-manno-h 24.0 57 0.0019 30.5 3.9 25 24-51 55-80 (357)
403 3llv_A Exopolyphosphatase-rela 23.9 45 0.0015 26.3 2.7 24 28-51 15-38 (141)
404 1kjq_A GART 2, phosphoribosylg 23.8 95 0.0033 29.4 5.5 34 7-51 10-43 (391)
405 1mvo_A PHOP response regulator 23.7 2.3E+02 0.0079 21.2 11.5 112 337-456 4-121 (136)
406 1spx_A Short-chain reductase f 23.6 73 0.0025 28.5 4.4 32 10-50 7-38 (278)
407 1qzu_A Hypothetical protein MD 23.5 57 0.002 28.2 3.4 37 7-51 18-56 (206)
408 3un1_A Probable oxidoreductase 23.5 52 0.0018 29.3 3.3 34 9-51 28-61 (260)
409 4huj_A Uncharacterized protein 23.5 68 0.0023 27.8 4.0 31 8-49 23-53 (220)
410 3c24_A Putative oxidoreductase 23.4 81 0.0028 28.5 4.7 33 8-50 11-43 (286)
411 3lxy_A 4-hydroxythreonine-4-ph 23.3 2.6E+02 0.0088 26.1 8.0 77 366-454 242-326 (334)
412 2fz5_A Flavodoxin; alpha/beta 23.3 1.1E+02 0.0037 23.7 4.9 29 23-51 9-37 (137)
413 1n2s_A DTDP-4-, DTDP-glucose o 23.2 43 0.0015 30.3 2.8 32 9-51 1-32 (299)
414 3nrc_A Enoyl-[acyl-carrier-pro 23.2 66 0.0022 28.9 4.0 33 10-51 27-61 (280)
415 2gas_A Isoflavone reductase; N 23.2 38 0.0013 30.8 2.4 25 24-51 11-35 (307)
416 3pxx_A Carveol dehydrogenase; 23.2 87 0.003 28.1 4.9 33 10-51 11-43 (287)
417 3ono_A Ribose/galactose isomer 23.1 91 0.0031 27.0 4.5 40 7-50 2-41 (214)
418 1vpd_A Tartronate semialdehyde 23.1 76 0.0026 28.8 4.5 32 8-50 5-36 (299)
419 3sc6_A DTDP-4-dehydrorhamnose 23.0 35 0.0012 30.8 2.1 33 9-51 6-38 (287)
420 1oth_A Protein (ornithine tran 23.0 2.9E+02 0.01 25.5 8.3 101 259-389 126-229 (321)
421 1vkr_A Mannitol-specific PTS s 23.0 97 0.0033 24.2 4.4 39 7-51 12-52 (125)
422 1sb8_A WBPP; epimerase, 4-epim 22.9 80 0.0027 29.4 4.7 25 24-51 36-60 (352)
423 2yy7_A L-threonine dehydrogena 22.9 50 0.0017 30.0 3.2 33 9-51 3-37 (312)
424 3uf0_A Short-chain dehydrogena 22.8 98 0.0033 27.7 5.1 31 10-49 32-62 (273)
425 3svl_A Protein YIEF; E. coli C 22.8 27 0.00091 29.8 1.1 39 7-49 3-42 (193)
426 2nm0_A Probable 3-oxacyl-(acyl 22.7 89 0.0031 27.6 4.8 34 9-51 21-54 (253)
427 4dll_A 2-hydroxy-3-oxopropiona 22.6 84 0.0029 29.0 4.7 33 7-50 30-62 (320)
428 3c1o_A Eugenol synthase; pheny 22.6 46 0.0016 30.5 2.9 34 8-51 4-37 (321)
429 3kto_A Response regulator rece 22.5 90 0.0031 23.9 4.3 111 337-455 7-125 (136)
430 2pl1_A Transcriptional regulat 22.4 2.3E+02 0.0078 20.6 11.3 109 338-454 2-116 (121)
431 3d7n_A Flavodoxin, WRBA-like p 22.4 33 0.0011 29.1 1.7 35 6-45 4-38 (193)
432 2o23_A HADH2 protein; HSD17B10 22.4 87 0.003 27.6 4.7 33 10-51 13-45 (265)
433 3q2o_A Phosphoribosylaminoimid 22.4 1.3E+02 0.0046 28.4 6.2 35 6-51 12-46 (389)
434 1w6u_A 2,4-dienoyl-COA reducta 22.3 1.1E+02 0.0037 27.7 5.4 33 10-51 27-59 (302)
435 1ehi_A LMDDL2, D-alanine:D-lac 22.2 52 0.0018 31.3 3.2 41 8-51 3-45 (377)
436 2qvg_A Two component response 22.1 2.6E+02 0.0088 21.1 11.4 111 336-453 7-132 (143)
437 1a04_A Nitrate/nitrite respons 22.1 3.4E+02 0.012 22.5 9.4 112 337-455 6-124 (215)
438 2c1x_A UDP-glucose flavonoid 3 22.0 52 0.0018 32.3 3.2 36 6-47 5-40 (456)
439 2wm3_A NMRA-like family domain 22.0 73 0.0025 28.8 4.1 25 24-51 14-39 (299)
440 1ooe_A Dihydropteridine reduct 22.0 95 0.0033 26.9 4.7 33 10-51 4-36 (236)
441 3i1j_A Oxidoreductase, short c 21.9 98 0.0034 26.9 4.9 33 10-51 15-47 (247)
442 1h5q_A NADP-dependent mannitol 21.9 72 0.0025 28.1 4.0 25 24-51 23-47 (265)
443 2i87_A D-alanine-D-alanine lig 21.9 35 0.0012 32.4 1.9 42 8-51 3-44 (364)
444 1o5i_A 3-oxoacyl-(acyl carrier 21.8 99 0.0034 27.2 4.9 33 9-50 19-51 (249)
445 2bka_A CC3, TAT-interacting pr 21.8 82 0.0028 27.3 4.3 25 24-51 27-53 (242)
446 3doj_A AT3G25530, dehydrogenas 21.8 88 0.003 28.7 4.6 33 8-51 21-53 (310)
447 4f6c_A AUSA reductase domain p 21.8 68 0.0023 30.9 4.0 26 24-52 78-103 (427)
448 4fs3_A Enoyl-[acyl-carrier-pro 21.6 1.3E+02 0.0045 26.5 5.7 39 1-51 1-41 (256)
449 1oi4_A Hypothetical protein YH 21.6 1.4E+02 0.0048 25.0 5.6 43 4-53 19-61 (193)
450 2hrz_A AGR_C_4963P, nucleoside 21.6 71 0.0024 29.5 4.0 35 7-51 13-54 (342)
451 3ohs_X Trans-1,2-dihydrobenzen 21.5 1.4E+02 0.0047 27.6 6.0 79 325-414 17-97 (334)
452 1qyc_A Phenylcoumaran benzylic 21.5 52 0.0018 29.9 3.0 33 9-51 5-37 (308)
453 3qiv_A Short-chain dehydrogena 21.5 96 0.0033 27.1 4.7 33 9-50 9-41 (253)
454 3f1l_A Uncharacterized oxidore 21.5 1.2E+02 0.0042 26.5 5.4 32 10-50 13-44 (252)
455 3l18_A Intracellular protease 21.4 1.3E+02 0.0043 24.5 5.1 38 8-52 2-39 (168)
456 1uay_A Type II 3-hydroxyacyl-C 21.4 87 0.003 27.1 4.4 25 24-51 11-35 (242)
457 1yxm_A Pecra, peroxisomal tran 21.3 1.2E+02 0.004 27.5 5.4 32 10-50 19-50 (303)
458 3cky_A 2-hydroxymethyl glutara 21.2 90 0.0031 28.3 4.6 32 8-50 4-35 (301)
459 1tll_A Nitric-oxide synthase, 21.2 96 0.0033 32.4 5.2 45 1-51 4-48 (688)
460 1q74_A 1D-MYO-inosityl 2-aceta 21.2 1.5E+02 0.0051 27.2 6.0 41 8-54 4-44 (303)
461 1rtt_A Conserved hypothetical 21.2 42 0.0014 28.3 2.1 39 8-50 6-44 (193)
462 1xq1_A Putative tropinone redu 21.0 95 0.0032 27.4 4.6 32 10-50 15-46 (266)
463 1xhf_A DYE resistance, aerobic 20.9 2.5E+02 0.0085 20.5 10.7 110 337-454 4-118 (123)
464 4da9_A Short-chain dehydrogena 20.8 1.1E+02 0.0038 27.4 5.1 33 9-50 29-61 (280)
465 3asu_A Short-chain dehydrogena 20.8 82 0.0028 27.7 4.1 25 23-50 8-32 (248)
466 3ak4_A NADH-dependent quinucli 20.8 1.2E+02 0.004 26.8 5.2 32 10-50 13-44 (263)
467 2h54_A Caspase-1; allosteric s 20.7 2.7E+02 0.0093 23.1 7.0 41 9-49 43-85 (178)
468 1sny_A Sniffer CG10964-PA; alp 20.7 73 0.0025 28.2 3.8 35 8-51 20-57 (267)
469 1zk4_A R-specific alcohol dehy 20.7 98 0.0033 27.0 4.6 24 24-50 15-38 (251)
470 1e4e_A Vancomycin/teicoplanin 20.7 39 0.0013 31.6 2.0 41 8-51 3-44 (343)
471 3lf2_A Short chain oxidoreduct 20.7 1.1E+02 0.0038 27.1 5.0 33 9-50 8-40 (265)
472 3v2g_A 3-oxoacyl-[acyl-carrier 20.7 83 0.0029 28.2 4.1 32 10-50 32-63 (271)
473 4eso_A Putative oxidoreductase 20.6 1.1E+02 0.0038 27.0 4.9 32 10-50 9-40 (255)
474 3a10_A Response regulator; pho 20.6 2.4E+02 0.0083 20.3 12.9 107 338-454 3-115 (116)
475 3vtz_A Glucose 1-dehydrogenase 20.6 1E+02 0.0034 27.5 4.7 35 8-51 13-47 (269)
476 3st7_A Capsular polysaccharide 20.5 54 0.0018 30.9 2.9 32 9-50 1-33 (369)
477 3dm5_A SRP54, signal recogniti 20.5 5.9E+02 0.02 24.7 16.2 157 324-484 170-339 (443)
478 3ksu_A 3-oxoacyl-acyl carrier 20.4 88 0.003 27.8 4.2 33 9-50 11-43 (262)
479 1gee_A Glucose 1-dehydrogenase 20.4 95 0.0032 27.3 4.4 24 24-50 16-39 (261)
480 4b4t_W RPN10, 26S proteasome r 20.4 1.8E+02 0.0061 26.2 6.1 54 307-362 108-162 (268)
481 1yio_A Response regulatory pro 20.3 3.6E+02 0.012 22.1 10.5 111 337-455 5-121 (208)
482 2ew8_A (S)-1-phenylethanol deh 20.3 1.2E+02 0.004 26.6 5.0 33 10-51 8-40 (249)
483 2ekp_A 2-deoxy-D-gluconate 3-d 20.2 1E+02 0.0035 26.7 4.6 33 10-51 3-35 (239)
484 3ioy_A Short-chain dehydrogena 20.2 98 0.0034 28.5 4.6 34 9-51 8-41 (319)
485 2nwq_A Probable short-chain de 20.1 87 0.003 28.1 4.1 32 10-50 22-53 (272)
486 2nzw_A Alpha1,3-fucosyltransfe 20.1 1.9E+02 0.0065 27.4 6.5 56 401-464 252-308 (371)
487 1iy8_A Levodione reductase; ox 20.0 1E+02 0.0035 27.3 4.6 32 10-50 14-45 (267)
No 1
>3vue_A GBSS-I, granule-bound starch synthase 1, chloroplastic/amyloplastic; rossmann fold, glycosyltransferase, transferase; 2.70A {Oryza sativa japonica group} PDB: 3vuf_A*
Probab=100.00 E-value=4.5e-69 Score=558.35 Aligned_cols=466 Identities=20% Similarity=0.304 Sum_probs=374.9
Q ss_pred cCCCceEEEEeeccccccccCcHHHHHhHHHHHHHHCCCeEEEEeecCCCCCcccccccceeeeeeeeecCCeeeEEEEE
Q 011163 5 LRNGFHIIHICTEMDPLVSIGSLASYVTGLSGALQRKGHLVEVILPKYACMNLDGVQGLREIKAECYSYFNGQLHANKIW 84 (492)
Q Consensus 5 ~~~~mkIl~v~~~~~p~~~~GG~~~~~~~l~~~L~~~Gh~V~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 84 (492)
++..||||+|+.|++|+.++||++.++..|+++|+++||+|.|++|.|+...... .......+...++...++++
T Consensus 6 ~~~~MkIl~vs~E~~P~~K~GGLadvv~~L~~aL~~~G~~V~Vi~P~Y~~~~~~~-----~~~~~~~~~~~~~~~~~~~~ 80 (536)
T 3vue_A 6 HHHHMNVVFVGAEMAPWSKTGGLGDVLGGLPPAMAANGHRVMVISPRYDQYKDAW-----DTSVVAEIKVADRYERVRFF 80 (536)
T ss_dssp --CCCEEEEECSCBTTTBCSSHHHHHHHHHHHHHHTTTCEEEEEEECCSCCTTCE-----EEEEEEEEEETTEEEEEEEE
T ss_pred CCCCcEEEEEEEeccchhccCcHHHHHHHHHHHHHHcCCeEEEEecCchhhhhhc-----ccceEEEEEecCceEEEEEE
Confidence 4667999999999999999999999999999999999999999999988654321 11233456677888888999
Q ss_pred EEEECCeEEEEEccCCCCCCccC------CCCC------CCCChhHHHHHHHHHHHHHHHHcC-----------CCCCEE
Q 011163 85 IGVVSGIGVTFIQPLHYSSFFNR------ESVY------GYSDDFERFTYFSRASLDYIVKSR-----------KQPDVL 141 (492)
Q Consensus 85 ~~~~~gv~v~~i~~~~~~~~~~~------~~~~------~~~~~~~~~~~~~~~~~~~~~~~~-----------~~pDiV 141 (492)
+...+|+++|+++. +.+|.+ ..+| +|.|+..||.+|+++.++.+..+. ..+||+
T Consensus 81 ~~~~~gv~~y~id~---~~~~~r~~~~~~~~~Y~~~~~~~~~d~~~rf~~f~~a~l~~~~~l~~~~~~~~~~~~~~ddIi 157 (536)
T 3vue_A 81 HCYKRGVDRVFIDH---PSFLEKVWGKTGEKIYGPDTGVDYKDNQMRFSLLCQAALEAPRILNLNNNPYFKGTYGEDVVF 157 (536)
T ss_dssp ECEETTEEEEEEEC---TTTTCC------------------CHHHHHHHHHHHHHHHHHHHCCCCCCTTCCSCCCSCEEE
T ss_pred EEEECCceEEEecC---hhhhccccccCCCcccCCCccCccchHHHHHHHHHHHHHHHHHHhccccchhhhccCCCCEEE
Confidence 99999999999983 445543 2234 377889999999999999877543 346799
Q ss_pred EEcCchhhhHHHHHHHHHhh-cCCCCCcEEEEecCCCCCCCCCchhhhhcCCCccccCCCCcc---cCCCCCccchhhHH
Q 011163 142 HIHNWETAIVGPLFWDIFVK-QGLEGTRILLSCHNLNSLCLEHPDKLALCGLDPARLHRPDRL---QDNTKTHLVNILKG 217 (492)
Q Consensus 142 h~h~~~~~~~~~~~~~~~~~-~~~~~~~~v~t~H~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~ 217 (492)
|+|+|+++++|.+++..+.. ....++|+|+|+|++.++|.++...+..++++.......+.. ........+++++.
T Consensus 158 H~hDW~t~l~~~~l~~~~~~~~~~~~~~~V~TiHnl~~qg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~k~ 237 (536)
T 3vue_A 158 VCNDWHTGPLASYLKNNYQPNGIYRNAKVAFCIHNISYQGRFAFEDYPELNLSERFRSSFDFIDGYDTPVEGRKINWMKA 237 (536)
T ss_dssp EEESGGGSTHHHHHHHHTTTTTSSTTCEEEEEESCTTCCCEEEGGGGGGGCCCGGGHHHHEEEETTTSTTCEEEEEHHHH
T ss_pred EECcchHHHHHHHHHHhhhhhhhhcccceeeeecCcccccccchhhhhhcCCchhhcchhhhhhcccccccccchhHHHH
Confidence 99999999999888665432 223579999999999999988776665555544321110101 01111235789999
Q ss_pred HHhhcCceeccCccchhhhhhcc-cCCCccHHHhhhcCCeeeecCCCCCCCcCCCCCcccccccCccC-ccChHHHHHHH
Q 011163 218 GVVYSNKVVIVSSMHSKGRIIRS-LSHGLESTLAIHQDKLLVAPCGFDSSTWDPSNDKFLTENYCAED-MKGKTVCKVTL 295 (492)
Q Consensus 218 ~~~~ad~vi~vS~~~~~~~~~~~-~~~~l~~~~~~~~~~~~vI~nGvd~~~f~p~~~~~~~~~~~~~~-~~~~~~~~~~~ 295 (492)
++..||.|++||+.+++++.+.. +|.++.. ..+..++.+|+||||.+.|+|..+..+..+++... +++|..++..+
T Consensus 238 ~i~~ad~v~tVS~~~a~ei~~~~~~g~~l~~--~~~~~~i~~I~NGiD~~~~~p~~d~~~~~~~~~~~~~~~K~~~k~~l 315 (536)
T 3vue_A 238 GILEADRVLTVSPYYAEELISGIARGCELDN--IMRLTGITGIVNGMDVSEWDPSKDKYITAKYDATTAIEAKALNKEAL 315 (536)
T ss_dssp HHHHCSEEEESCHHHHHHHHTTCCCCSSSCC--CSCCCSCEECCCCCCTTTSCTTTCSSSSCCCCTTTHHHHHHHHHHHH
T ss_pred HHHhccEEEEcCHHHhhhhhccccccccccc--ccccCCeEEEECCcchhhcCCCCccccccccchhhhhhhhHHHHHHH
Confidence 99999999999999999987532 2222221 12457899999999999999999888888887665 56888899999
Q ss_pred HHHhCCCCCCCceEEEEEeccccccCHHHHHHHHHHHhHcCcEEEEEecCCChhHHHHHHHHHHHhCCCeEEEEeccCHH
Q 011163 296 QQQLGLSKDASTIVVGCIFSDVSDVFLENLKAVVRGAKMRGIQFVFTGTNKLPSASRALVSFQEELKDGIVIFVDSYDDA 375 (492)
Q Consensus 296 ~~~lg~~~~~~~~~i~~~grl~~~Kg~~~li~a~~~l~~~~~~lvivG~g~~~~~~~~l~~~~~~~~~~~v~~~~~~~~~ 375 (492)
++++|++.+++.|+|+++||+.++||++.|++|++++.+.+.+|+|+|.|+ ......++..+..++ +++.+.+.++.+
T Consensus 316 ~~~~gl~~d~~~p~i~~vgRl~~~Kg~~~li~a~~~l~~~~~~l~l~G~G~-~~~~~~~~~~~~~~~-~~v~~~~~~~~~ 393 (536)
T 3vue_A 316 QAEAGLPVDRKIPLIAFIGRLEEQKGPDVMAAAIPELMQEDVQIVLLGTGK-KKFEKLLKSMEEKYP-GKVRAVVKFNAP 393 (536)
T ss_dssp HHHTTSCCCTTSCEEEEECCBSGGGCHHHHHHHHHHHTTSSCEEEEECCBC-HHHHHHHHHHHHHST-TTEEEECSCCHH
T ss_pred HHhcCCCCCCCCcEEEEEeeccccCChHHHHHHHHHhHhhCCeEEEEeccC-chHHHHHHHHHhhcC-CceEEEEeccHH
Confidence 999999988889999999999999999999999999988889999999764 566777888888874 799999999999
Q ss_pred HHHHHHhcCCEEEECCCCCCCchHHHHHhhcCCceEEEecCCCcccccccccccccceeee----------eecCCCHHH
Q 011163 376 LLHLIFSGSDIILCHSFHDPLLQVPLKALKYGAAPIAVTSSDIEFRHFAEFDHESTRFSRF----------ISSTFGNIS 445 (492)
Q Consensus 376 ~~~~~~~~adi~v~pS~~E~~glv~lEAma~G~PvV~~~~~~gg~~e~v~~~~~~~g~~G~----------~~~~~~~~~ 445 (492)
+...+|++||+||+||++||||++++|||+||+|||+|++ ||++|+|.+ |.||+ +|++.|+++
T Consensus 394 ~~~~~~~~aD~~v~PS~~E~fgl~~lEAma~G~PvI~s~~--gG~~e~V~d-----g~~G~~~~~~~~~g~l~~~~d~~~ 466 (536)
T 3vue_A 394 LAHLIMAGADVLAVPSRFEPCGLIQLQGMRYGTPCACAST--GGLVDTVIE-----GKTGFHMGRLSVDCKVVEPSDVKK 466 (536)
T ss_dssp HHHHHHHHCSEEEECCSCCSSCSHHHHHHHTTCCEEECSC--THHHHHCCB-----TTTEEECCCCCSCTTCCCHHHHHH
T ss_pred HHHHHHHhhheeecccccCCCCHHHHHHHHcCCCEEEcCC--CCchheeeC-----CCCccccccCCCceeEECCCCHHH
Confidence 9999999999999999999999999999999999999999 999999984 44555 788889999
Q ss_pred HHHHHHHHhc--CHHHHHHHHHHHHhccCCchhhHHHHHHHHHHHHh
Q 011163 446 LSQALEEIKN--NPLSWKRKIKDAMLQDFSWDADCNDIHISAYTAIK 490 (492)
Q Consensus 446 l~~ai~~~~~--~~~~~~~~~~~a~~~~fsw~~~a~~~~~~~Y~~l~ 490 (492)
|+++|+++++ +.+.++++++++++++|||+++|++ |+++|++|.
T Consensus 467 la~ai~ral~~~~~~~~~~~~~~am~~~fSW~~~A~~-y~~ly~~L~ 512 (536)
T 3vue_A 467 VAATLKRAIKVVGTPAYEEMVRNCMNQDLSWKGPAKN-WENVLLGLG 512 (536)
T ss_dssp HHHHHHHHHHHTTSHHHHHHHHHHHHSCCSSHHHHHH-HHHHHHTTC
T ss_pred HHHHHHHHHHhcCcHHHHHHHHHHHHhcCCHHHHHHH-HHHHHHHhh
Confidence 9999988764 4456889999999999999999999 599999873
No 2
>2qzs_A Glycogen synthase; glycosyl-transferase, GT-B fold, rossmann fold, closed-form, ADP and glucose binding, glycogen biosynthesis; HET: GLC ADP 250; 2.20A {Escherichia coli} PDB: 2r4t_A* 2r4u_A* 3guh_A* 3cx4_A* 3cop_A* 3d1j_A
Probab=100.00 E-value=1.8e-54 Score=447.70 Aligned_cols=459 Identities=23% Similarity=0.359 Sum_probs=333.9
Q ss_pred ceEEEEeeccccccccCcHHHHHhHHHHHHHHCCCeEEEEeecCCCCCcccccccceeeeeeeeecCCeeeEEEEEEEEE
Q 011163 9 FHIIHICTEMDPLVSIGSLASYVTGLSGALQRKGHLVEVILPKYACMNLDGVQGLREIKAECYSYFNGQLHANKIWIGVV 88 (492)
Q Consensus 9 mkIl~v~~~~~p~~~~GG~~~~~~~l~~~L~~~Gh~V~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 88 (492)
|||++|+.+++|....||+++++.+|+++|.++||+|+|+++.++...... .....+ ..+. ..++ ...+.....
T Consensus 1 MkIl~v~~~~~P~~~~GG~~~~~~~la~~L~~~G~~V~vi~~~~~~~~~~~-~~~~~~-~~~~-~~~~---~~~~~~~~~ 74 (485)
T 2qzs_A 1 MQVLHVCSEMFPLLKTGGLADVIGALPAAQIADGVDARVLLPAFPDIRRGV-TDAQVV-SRRD-TFAG---HITLLFGHY 74 (485)
T ss_dssp CEEEEECSCBTTTBCSSHHHHHHHHHHHHHHHTTCEEEEEEECCHHHHHHC-TTCEEE-EEEC-CTTC---CEEEEEEEE
T ss_pred CeEEEEeeeccccccCCcHHHHHHHHHHHHHHcCCEEEEEecCcccccccc-ccceeE-EEec-ccCC---cEEEEEEEE
Confidence 899999999988756799999999999999999999999998653211100 000000 0000 0000 011222235
Q ss_pred CCeEEEEEccCCCCCCccCCC-CC------CCCChhHHHHHHHHHHHHHHHHcC--CCCCEEEEcCchhhhHHHHHHHHH
Q 011163 89 SGIGVTFIQPLHYSSFFNRES-VY------GYSDDFERFTYFSRASLDYIVKSR--KQPDVLHIHNWETAIVGPLFWDIF 159 (492)
Q Consensus 89 ~gv~v~~i~~~~~~~~~~~~~-~~------~~~~~~~~~~~~~~~~~~~~~~~~--~~pDiVh~h~~~~~~~~~~~~~~~ 159 (492)
+|+++++++. +.++.+.. ++ +|.++..++..+..++.++++.+. .+|||||+|++.+++++.+++..
T Consensus 75 ~gv~v~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Divh~~~~~~~~~~~~~~~~- 150 (485)
T 2qzs_A 75 NGVGIYLIDA---PHLYDRPGSPYHDTNLFAYTDNVLRFALLGWVGAEMASGLDPFWRPDVVHAHDWHAGLAPAYLAAR- 150 (485)
T ss_dssp TTEEEEEEEC---HHHHCCSSCSSBCTTSCBCTTHHHHHHHHHHHHHHHTTTSSTTCCCSEEEEETGGGTTHHHHHHHT-
T ss_pred CCcEEEEEeC---hhhccCCCCccCCcccCCCCchHHHHHHHHHHHHHHHHHhccCCCCCEEEeeccchhHHHHHHhhc-
Confidence 8999998862 11111111 22 244555566666666666655432 68999999998877776655311
Q ss_pred hhcCCCCCcEEEEecCCCCCCCCCchhhhhcCCCccccCCCCcccCCCCCccchhhHHHHhhcCceeccCccchhhhhhc
Q 011163 160 VKQGLEGTRILLSCHNLNSLCLEHPDKLALCGLDPARLHRPDRLQDNTKTHLVNILKGGVVYSNKVVIVSSMHSKGRIIR 239 (492)
Q Consensus 160 ~~~~~~~~~~v~t~H~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ad~vi~vS~~~~~~~~~~ 239 (492)
..++|+|+|+|+..+.+.++...+..++++...+. .....++ ....+++..++.+|.++++|+..++.+...
T Consensus 151 ----~~~~p~v~t~H~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~---~~~~~~~~~~~~ad~vi~~S~~~~~~~~~~ 222 (485)
T 2qzs_A 151 ----GRPAKSVFTVHNLAYQGMFYAHHMNDIQLPWSFFN-IHGLEFN---GQISFLKAGLYYADHITAVSPTYAREITEP 222 (485)
T ss_dssp ----TCSSEEEEEESCTTCCCEEEGGGGGTTTCCGGGCS-TTTTEET---TEEEHHHHHHHHCSEEEESSHHHHHHTTSH
T ss_pred ----cCCCCEEEEecCccccCCCCHHHHHhcCCCchhcc-ccccccc---ccccHHHHHHHhcCeEEecCHHHHHHHhcc
Confidence 26899999999976555444333333333322211 0011111 123567888899999999999988776542
Q ss_pred ccCCCccHHHhhhc--CCeeeecCCCCCCCcCCCCCcccccccCccCccChHHHHHHHHHHhCCCCCCCceEEEEEeccc
Q 011163 240 SLSHGLESTLAIHQ--DKLLVAPCGFDSSTWDPSNDKFLTENYCAEDMKGKTVCKVTLQQQLGLSKDASTIVVGCIFSDV 317 (492)
Q Consensus 240 ~~~~~l~~~~~~~~--~~~~vI~nGvd~~~f~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~lg~~~~~~~~~i~~~grl~ 317 (492)
.++.+++.++..+. .++.+||||+|.+.|.|..+.....+|+.+++.++...+..+++++|++.+.+.++++++||+.
T Consensus 223 ~~~~~~~~~~~~~~~~~~~~vi~ngvd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~i~~vGrl~ 302 (485)
T 2qzs_A 223 QFAYGMEGLLQQRHREGRLSGVLNGVDEKIWSPETDLLLASRYTRDTLEDKAENKRQLQIAMGLKVDDKVPLFAVVSRLT 302 (485)
T ss_dssp HHHTTCHHHHHHHHHTTCEEECCCCCCTTTSCTTTCTTSSSCCCTTCGGGGHHHHHHHHHHHTCCCCTTSCEEEEEEEES
T ss_pred ccCcchHHHHHhhccCCceEEEecCCCccccCccccccccccccccchhHHHHhHHHHHHHcCCCCCCCCeEEEEeccCc
Confidence 13322222222234 7899999999999998876555566777777777888889999999998644568899999999
Q ss_pred cccCHHHHHHHHHHHhHcCcEEEEEecCCChhHHHHHHHHHHHhCCCeEEEEeccCHHHHHHHHhcCCEEEECCCCCCCc
Q 011163 318 SDVFLENLKAVVRGAKMRGIQFVFTGTNKLPSASRALVSFQEELKDGIVIFVDSYDDALLHLIFSGSDIILCHSFHDPLL 397 (492)
Q Consensus 318 ~~Kg~~~li~a~~~l~~~~~~lvivG~g~~~~~~~~l~~~~~~~~~~~v~~~~~~~~~~~~~~~~~adi~v~pS~~E~~g 397 (492)
++||++.|++|++.+.+.+++|+|+|+|+ ..+.+.+++++++++ ++|.++.+++.+++..+|++||++|+||.+|+||
T Consensus 303 ~~Kg~~~li~a~~~l~~~~~~l~ivG~g~-~~~~~~l~~~~~~~~-~~v~~~~g~~~~~~~~~~~~adv~v~pS~~E~~g 380 (485)
T 2qzs_A 303 SQKGLDLVLEALPGLLEQGGQLALLGAGD-PVLQEGFLAAAAEYP-GQVGVQIGYHEAFSHRIMGGADVILVPSRFEPCG 380 (485)
T ss_dssp GGGCHHHHHHHHHHHHHTTCEEEEEEEEC-HHHHHHHHHHHHHST-TTEEEEESCCHHHHHHHHHHCSEEEECCSCCSSC
T ss_pred cccCHHHHHHHHHHHhhCCcEEEEEeCCc-hHHHHHHHHHHHhCC-CcEEEeCCCCHHHHHHHHHhCCEEEECCccCCCc
Confidence 99999999999999987789999999774 346788999998874 7887556678888889999999999999999999
Q ss_pred hHHHHHhhcCCceEEEecCCCccccccccccc----ccceeeeeecCCCHHHHHHHHHHHh---cCHHHHHHHHHHHHhc
Q 011163 398 QVPLKALKYGAAPIAVTSSDIEFRHFAEFDHE----STRFSRFISSTFGNISLSQALEEIK---NNPLSWKRKIKDAMLQ 470 (492)
Q Consensus 398 lv~lEAma~G~PvV~~~~~~gg~~e~v~~~~~----~~g~~G~~~~~~~~~~l~~ai~~~~---~~~~~~~~~~~~a~~~ 470 (492)
++++||||||+|||+|++ ||+.|++.++.. ..+.+|++++++|+++|+++|..++ +|++.+++++++++.+
T Consensus 381 ~~~lEAma~G~PvI~s~~--gg~~e~v~~~~~~~~~~~~~~G~l~~~~d~~~la~~i~~ll~~~~~~~~~~~~~~~~~~~ 458 (485)
T 2qzs_A 381 LTQLYGLKYGTLPLVRRT--GGLADTVSDCSLENLADGVASGFVFEDSNAWSLLRAIRRAFVLWSRPSLWRFVQRQAMAM 458 (485)
T ss_dssp SHHHHHHHHTCEEEEESS--HHHHHHCCBCCHHHHHTTCCCBEEECSSSHHHHHHHHHHHHHHHTSHHHHHHHHHHHHHC
T ss_pred HHHHHHHHCCCCEEECCC--CCccceeccCccccccccccceEEECCCCHHHHHHHHHHHHHHcCCHHHHHHHHHHHHhh
Confidence 999999999999999999 999999873100 0016899999999999999999999 7999999999999889
Q ss_pred cCCchhhHHHHHHHHHHHHh
Q 011163 471 DFSWDADCNDIHISAYTAIK 490 (492)
Q Consensus 471 ~fsw~~~a~~~~~~~Y~~l~ 490 (492)
+|||+.++++ |+++|+++.
T Consensus 459 ~fs~~~~~~~-~~~ly~~~~ 477 (485)
T 2qzs_A 459 DFSWQVAAKS-YRELYYRLK 477 (485)
T ss_dssp CCCHHHHHHH-HHHHHHHHC
T ss_pred cCCHHHHHHH-HHHHHHHhh
Confidence 9999999999 599999874
No 3
>1rzu_A Glycogen synthase 1; glycosyl-transferase, GT-B fold, rossmann fold, ADP-binding, transferase; HET: ADP; 2.30A {Agrobacterium tumefaciens} SCOP: c.87.1.8 PDB: 1rzv_A
Probab=100.00 E-value=3.3e-54 Score=445.65 Aligned_cols=455 Identities=20% Similarity=0.310 Sum_probs=337.6
Q ss_pred ceEEEEeeccccccccCcHHHHHhHHHHHHHHCCCeEEEEeecCCCCCcccccccceeeeeeeeecCCeeeEEEEEEEEE
Q 011163 9 FHIIHICTEMDPLVSIGSLASYVTGLSGALQRKGHLVEVILPKYACMNLDGVQGLREIKAECYSYFNGQLHANKIWIGVV 88 (492)
Q Consensus 9 mkIl~v~~~~~p~~~~GG~~~~~~~l~~~L~~~Gh~V~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 88 (492)
|||++|+.+++|....||+++++.+|+++|.++||+|+|+++.++...... .....+ ..+.+..++ ...+.....
T Consensus 1 MkIl~v~~~~~P~~~~GG~~~~~~~la~~L~~~G~~V~vi~~~~~~~~~~~-~~~~~~-~~~~~~~~~---~~~~~~~~~ 75 (485)
T 1rzu_A 1 MNVLSVSSEIYPLIKTGGLADVVGALPIALEAHGVRTRTLIPGYPAVKAAV-TDPVKC-FEFTDLLGE---KADLLEVQH 75 (485)
T ss_dssp CEEEEECSCBTTTBCSSHHHHHHHHHHHHHHTTTCEEEEEEECCHHHHHHC-CSCEEE-EEESCSSSC---CEEEEEEEE
T ss_pred CeEEEEeeeeccccccccHHHHHHHHHHHHHHcCCeEEEEecccccccccc-ccccee-EEEEEecCC---eEEEEEEEe
Confidence 899999999988655799999999999999999999999998653211100 000000 000111111 012223345
Q ss_pred CCeEEEEEccCCCCCCccCC-CCC------CCCChhHHHHHHHHHHHHHHHHc--CCCCCEEEEcCchhhhHHHHHHHHH
Q 011163 89 SGIGVTFIQPLHYSSFFNRE-SVY------GYSDDFERFTYFSRASLDYIVKS--RKQPDVLHIHNWETAIVGPLFWDIF 159 (492)
Q Consensus 89 ~gv~v~~i~~~~~~~~~~~~-~~~------~~~~~~~~~~~~~~~~~~~~~~~--~~~pDiVh~h~~~~~~~~~~~~~~~ 159 (492)
+|+++++++. +.++.+. .++ +|.++..++..+..++.++++.+ ..+|||||+|++.+++.+.++++.
T Consensus 76 ~gv~v~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~DiIh~~~~~~~~~~~~~~~~- 151 (485)
T 1rzu_A 76 ERLDLLILDA---PAYYERSGGPYLGQTGKDYPDNWKRFAALSLAAARIGAGVLPGWRPDMVHAHDWQAAMTPVYMRYA- 151 (485)
T ss_dssp TTEEEEEEEC---HHHHCSSSCSSBCTTSSBCTTHHHHHHHHHHHHHHHHTTCSSSCCCSEEEEEHHHHTTHHHHHHHS-
T ss_pred cCceEEEEeC---hHHhCCCccccCCcccccccchHHHHHHHHHHHHHHHHHhccCCCCCEEEecccchhHHHHHHhhc-
Confidence 8999998862 1112111 122 23455566666777777666543 578999999998777776655431
Q ss_pred hhcCCCCCcEEEEecCCCCCCCCCchhhhhcCCCccccCCCCcccCCCCCccchhhHHHHhhcCceeccCccchhhhhhc
Q 011163 160 VKQGLEGTRILLSCHNLNSLCLEHPDKLALCGLDPARLHRPDRLQDNTKTHLVNILKGGVVYSNKVVIVSSMHSKGRIIR 239 (492)
Q Consensus 160 ~~~~~~~~~~v~t~H~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ad~vi~vS~~~~~~~~~~ 239 (492)
+..++|+|+|+|+..+.+.++...+..++++...+. .....++ ....+++..++.+|.++++|+..++.+...
T Consensus 152 ---~~~~~p~v~t~H~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~---~~~~~~~~~~~~ad~vi~~S~~~~~~~~~~ 224 (485)
T 1rzu_A 152 ---ETPEIPSLLTIHNIAFQGQFGANIFSKLALPAHAFG-MEGIEYY---NDVSFLKGGLQTATALSTVSPSYAEEILTA 224 (485)
T ss_dssp ---SSCCCCEEEEESCTTCCCEECGGGGGGSCCCGGGSS-TTTTEET---TEEEHHHHHHHHCSEEEESCHHHHHHTTSH
T ss_pred ---ccCCCCEEEEecCccccCCCCHHHHhhcCCChhhcc-ccccccc---ccccHHHHHHhhcCEEEecCHhHHHHHhcc
Confidence 126899999999976655444433333343332211 1111111 113567888999999999999988876542
Q ss_pred ccCCCccHHHhhhcCCeeeecCCCCCCCcCCCCCcccccccCccCccChHHHHHHHHHHhCCCCCCCceEEEEEeccccc
Q 011163 240 SLSHGLESTLAIHQDKLLVAPCGFDSSTWDPSNDKFLTENYCAEDMKGKTVCKVTLQQQLGLSKDASTIVVGCIFSDVSD 319 (492)
Q Consensus 240 ~~~~~l~~~~~~~~~~~~vI~nGvd~~~f~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~lg~~~~~~~~~i~~~grl~~~ 319 (492)
.+|.++...+.....++.+||||+|.+.|.|..+......|..+++.++...+..+++++|++.+. .++++++||+.++
T Consensus 225 ~~g~~~~~~~~~~~~~~~vi~ngvd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~-~~~i~~vGrl~~~ 303 (485)
T 1rzu_A 225 EFGMGLEGVIGSRAHVLHGIVNGIDADVWNPATDHLIHDNYSAANLKNRALNKKAVAEHFRIDDDG-SPLFCVISRLTWQ 303 (485)
T ss_dssp HHHTTCHHHHHTTGGGEEECCCCBCTTTSCTTTCTTSSSCCBTTBCTTHHHHHHHHHHHHTCCCSS-SCEEEEESCBSTT
T ss_pred ccCcchHHHHHhhcCCceEEcCCCcccccCCcccccccccccccchhhHHHhHHHHHHhcCCCCCC-CeEEEEEccCccc
Confidence 233333333334567899999999999998876555556677777778888889999999998642 3589999999999
Q ss_pred cCHHHHHHHHHHHhHcCcEEEEEecCCChhHHHHHHHHHHHhCCCeEEEEeccCHHHHHHHHhcCCEEEECCCCCCCchH
Q 011163 320 VFLENLKAVVRGAKMRGIQFVFTGTNKLPSASRALVSFQEELKDGIVIFVDSYDDALLHLIFSGSDIILCHSFHDPLLQV 399 (492)
Q Consensus 320 Kg~~~li~a~~~l~~~~~~lvivG~g~~~~~~~~l~~~~~~~~~~~v~~~~~~~~~~~~~~~~~adi~v~pS~~E~~glv 399 (492)
||++.|++|++++.+.+++|+|+|+|+ ..+.+.+++++++++ ++|.++.+++.+++..+|++||++|+||.+|+||++
T Consensus 304 Kg~~~li~a~~~l~~~~~~l~ivG~g~-~~~~~~l~~~~~~~~-~~v~~~~g~~~~~~~~~~~~adv~v~pS~~E~~~~~ 381 (485)
T 1rzu_A 304 KGIDLMAEAVDEIVSLGGRLVVLGAGD-VALEGALLAAASRHH-GRVGVAIGYNEPLSHLMQAGCDAIIIPSRFEPCGLT 381 (485)
T ss_dssp TTHHHHHTTHHHHHHTTCEEEEEECBC-HHHHHHHHHHHHHTT-TTEEEEESCCHHHHHHHHHHCSEEEECCSCCSSCSH
T ss_pred cCHHHHHHHHHHHHhcCceEEEEeCCc-hHHHHHHHHHHHhCC-CcEEEecCCCHHHHHHHHhcCCEEEECcccCCCCHH
Confidence 999999999999987789999999764 346788999998884 789865677888888999999999999999999999
Q ss_pred HHHHhhcCCceEEEecCCCcccccccccccccc---------eeeeeecCCCHHHHHHHHHHHh---cCHHHHHHHHHHH
Q 011163 400 PLKALKYGAAPIAVTSSDIEFRHFAEFDHESTR---------FSRFISSTFGNISLSQALEEIK---NNPLSWKRKIKDA 467 (492)
Q Consensus 400 ~lEAma~G~PvV~~~~~~gg~~e~v~~~~~~~g---------~~G~~~~~~~~~~l~~ai~~~~---~~~~~~~~~~~~a 467 (492)
++|||+||+|||+++. ||+.|++.+ + .+|+++++.|+++|+++|..++ +|++.++++++++
T Consensus 382 ~lEAma~G~PvI~s~~--gg~~e~v~~-----~~~~~~~~~~~~G~l~~~~d~~~la~~i~~ll~~~~~~~~~~~~~~~~ 454 (485)
T 1rzu_A 382 QLYALRYGCIPVVART--GGLADTVID-----ANHAALASKAATGVQFSPVTLDGLKQAIRRTVRYYHDPKLWTQMQKLG 454 (485)
T ss_dssp HHHHHHHTCEEEEESS--HHHHHHCCB-----CCHHHHHTTCCCBEEESSCSHHHHHHHHHHHHHHHTCHHHHHHHHHHH
T ss_pred HHHHHHCCCCEEEeCC--CChhheecc-----cccccccccCCcceEeCCCCHHHHHHHHHHHHHHhCCHHHHHHHHHHH
Confidence 9999999999999999 999999873 4 6899999999999999999999 8999999999999
Q ss_pred HhccCCchhhHHHHHHHHHHHHh
Q 011163 468 MLQDFSWDADCNDIHISAYTAIK 490 (492)
Q Consensus 468 ~~~~fsw~~~a~~~~~~~Y~~l~ 490 (492)
+.++|||+.+++++ +++|+++.
T Consensus 455 ~~~~fs~~~~~~~~-~~~y~~~~ 476 (485)
T 1rzu_A 455 MKSDVSWEKSAGLY-AALYSQLI 476 (485)
T ss_dssp HTCCCBHHHHHHHH-HHHHHHHT
T ss_pred HHHhCChHHHHHHH-HHHHHHhh
Confidence 88999999999994 99999874
No 4
>3fro_A GLGA glycogen synthase; glycosyltransferase family, UDP/ADP-glucose-glycogen synthas rossman folds, transferase; HET: NHF; 2.50A {Pyrococcus abyssi} SCOP: c.87.1.8 PDB: 2bis_A* 3l01_A*
Probab=100.00 E-value=7.4e-51 Score=414.40 Aligned_cols=418 Identities=20% Similarity=0.267 Sum_probs=324.2
Q ss_pred CCceEEEEeeccccccccCcHHHHHhHHHHHHHHCCCeEEEEeecCCCCCcccccccceeeeeeeeecCCeeeEEEEEEE
Q 011163 7 NGFHIIHICTEMDPLVSIGSLASYVTGLSGALQRKGHLVEVILPKYACMNLDGVQGLREIKAECYSYFNGQLHANKIWIG 86 (492)
Q Consensus 7 ~~mkIl~v~~~~~p~~~~GG~~~~~~~l~~~L~~~Gh~V~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 86 (492)
++||||+|+.+++| ...||+++++.+|+++|.++||+|+|+++.++...... . ..+.+ + +......++..
T Consensus 1 r~MkIl~v~~~~~p-~~~gG~~~~~~~la~~L~~~G~~V~v~~~~~~~~~~~~---~----~~~~~-~-~~~~~~~~~~~ 70 (439)
T 3fro_A 1 RHMKVLLLGFEFLP-VKVGGLAEALTAISEALASLGHEVLVFTPSHGRFQGEE---I----GKIRV-F-GEEVQVKVSYE 70 (439)
T ss_dssp CCCEEEEECSCCTT-SCSSSHHHHHHHHHHHHHHTTCEEEEEEECTTCSCCEE---E----EEEEE-T-TEEEEEEEEEE
T ss_pred CceEEEEEecccCC-cccCCHHHHHHHHHHHHHHCCCeEEEEecCCCCchhhh---h----ccccc-c-Ccccceeeeec
Confidence 47999999999888 46799999999999999999999999999876543221 0 11122 1 23344555655
Q ss_pred EECCeEEEEEccCCCCCCccCCCCCC-CCCh-hHHHHHHHHHHHHHHHHc---CCCCCEEEEcCchhhhHHHHHHHHHhh
Q 011163 87 VVSGIGVTFIQPLHYSSFFNRESVYG-YSDD-FERFTYFSRASLDYIVKS---RKQPDVLHIHNWETAIVGPLFWDIFVK 161 (492)
Q Consensus 87 ~~~gv~v~~i~~~~~~~~~~~~~~~~-~~~~-~~~~~~~~~~~~~~~~~~---~~~pDiVh~h~~~~~~~~~~~~~~~~~ 161 (492)
..+|+++++++. .++.+...|. +.++ ..++..+...+...+++. ..+|||||+|++.+++.+.++++.
T Consensus 71 ~~~gv~v~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dii~~~~~~~~~~~~~~~~~--- 143 (439)
T 3fro_A 71 ERGNLRIYRIGG----GLLDSEDVYGPGWDGLIRKAVTFGRASVLLLNDLLREEPLPDVVHFHDWHTVFAGALIKKY--- 143 (439)
T ss_dssp EETTEEEEEEES----GGGGCSSTTCSHHHHHHHHHHHHHHHHHHHHHHHTTTSCCCSEEEEESGGGHHHHHHHHHH---
T ss_pred cCCCceEEEecc----hhccccccccCCcchhhhhhHHHHHHHHHHHHHHhccCCCCeEEEecchhhhhhHHHHhhc---
Confidence 779999999973 3445545554 4445 566677778888777765 579999999998887776666543
Q ss_pred cCCCCCcEEEEecCCCCCCCCCchhhhhcCCCccccCCCCcccCCCCCccchhhHHHHhhcCceeccCccchhhhhhccc
Q 011163 162 QGLEGTRILLSCHNLNSLCLEHPDKLALCGLDPARLHRPDRLQDNTKTHLVNILKGGVVYSNKVVIVSSMHSKGRIIRSL 241 (492)
Q Consensus 162 ~~~~~~~~v~t~H~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ad~vi~vS~~~~~~~~~~~~ 241 (492)
.++|+|+|+|+....+. +........+.. ...+ ....+++..++.||.++++|+.+++....
T Consensus 144 ---~~~~~v~~~h~~~~~~~-~~~~~~~~~~~~--------~~~~---~~~~~~~~~~~~ad~ii~~S~~~~~~~~~--- 205 (439)
T 3fro_A 144 ---FKIPAVFTIHRLNKSKL-PAFYFHEAGLSE--------LAPY---PDIDPEHTGGYIADIVTTVSRGYLIDEWG--- 205 (439)
T ss_dssp ---HCCCEEEEESCCCCCCE-EHHHHHHTTCGG--------GCCS---SEECHHHHHHHHCSEEEESCHHHHHHTHH---
T ss_pred ---cCCCEEEEecccccccC-chHHhCcccccc--------cccc---ceeeHhhhhhhhccEEEecCHHHHHHHhh---
Confidence 58999999998754321 111111001100 0011 12357788899999999999988775322
Q ss_pred CCCccHHHhhhcCCeeeecCCCCCCCcCCCCCcccccccCccCccChHHHHHHHHHHhCCCCCCCceEEEEEeccc-ccc
Q 011163 242 SHGLESTLAIHQDKLLVAPCGFDSSTWDPSNDKFLTENYCAEDMKGKTVCKVTLQQQLGLSKDASTIVVGCIFSDV-SDV 320 (492)
Q Consensus 242 ~~~l~~~~~~~~~~~~vI~nGvd~~~f~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~lg~~~~~~~~~i~~~grl~-~~K 320 (492)
.+.....++.+||||+|.+.|.|.... ..+...+..+++++|++. + ++++++||+. +.|
T Consensus 206 ------~~~~~~~~i~vi~ngvd~~~~~~~~~~-----------~~~~~~~~~~~~~~~~~~--~-~~i~~~G~~~~~~K 265 (439)
T 3fro_A 206 ------FFRNFEGKITYVFNGIDCSFWNESYLT-----------GSRDERKKSLLSKFGMDE--G-VTFMFIGRFDRGQK 265 (439)
T ss_dssp ------HHGGGTTSEEECCCCCCTTTSCGGGSC-----------SCHHHHHHHHHHHHTCCS--C-EEEEEECCSSCTTB
T ss_pred ------hhhhcCCceeecCCCCCchhcCccccc-----------chhhhhHHHHHHHcCCCC--C-cEEEEEcccccccc
Confidence 222357899999999999988775210 134557888999999964 3 8899999999 999
Q ss_pred CHHHHHHHHHHHhH----cCcEEEEEecCCChhHHHHHHHHHHHhCCCeEEEEeccCHHHHHHHHhcCCEEEECCCCCCC
Q 011163 321 FLENLKAVVRGAKM----RGIQFVFTGTNKLPSASRALVSFQEELKDGIVIFVDSYDDALLHLIFSGSDIILCHSFHDPL 396 (492)
Q Consensus 321 g~~~li~a~~~l~~----~~~~lvivG~g~~~~~~~~l~~~~~~~~~~~v~~~~~~~~~~~~~~~~~adi~v~pS~~E~~ 396 (492)
|++.+++|++++.+ .+++|+|+|+|+ ..+.+.+++++++++ +++.+.|.++.+++..+|+.||++|+||.+|+|
T Consensus 266 g~~~li~a~~~l~~~~~~~~~~l~i~G~g~-~~~~~~l~~~~~~~~-~~~~~~g~~~~~~~~~~~~~adv~v~ps~~e~~ 343 (439)
T 3fro_A 266 GVDVLLKAIEILSSKKEFQEMRFIIIGKGD-PELEGWARSLEEKHG-NVKVITEMLSREFVRELYGSVDFVIIPSYFEPF 343 (439)
T ss_dssp CHHHHHHHHHHHHTSGGGGGEEEEEECCCC-HHHHHHHHHHHHHCT-TEEEECSCCCHHHHHHHHTTCSEEEECBSCCSS
T ss_pred cHHHHHHHHHHHHhcccCCCeEEEEEcCCC-hhHHHHHHHHHhhcC-CEEEEcCCCCHHHHHHHHHHCCEEEeCCCCCCc
Confidence 99999999999986 589999999764 456688999999986 666666668889999999999999999999999
Q ss_pred chHHHHHhhcCCceEEEecCCCcccccccccccccceeeeeecCCCHHHHHHHHHHHhc-CHHHHHHHHHHHHh--ccCC
Q 011163 397 LQVPLKALKYGAAPIAVTSSDIEFRHFAEFDHESTRFSRFISSTFGNISLSQALEEIKN-NPLSWKRKIKDAML--QDFS 473 (492)
Q Consensus 397 glv~lEAma~G~PvV~~~~~~gg~~e~v~~~~~~~g~~G~~~~~~~~~~l~~ai~~~~~-~~~~~~~~~~~a~~--~~fs 473 (492)
|++++||||||+|||+++. ||+.|+++ ++ +|++++++|+++++++|..+++ |++.+++++++++. ++||
T Consensus 344 ~~~~~EAma~G~Pvi~s~~--~~~~e~~~-----~~-~g~~~~~~d~~~la~~i~~ll~~~~~~~~~~~~~~~~~~~~~s 415 (439)
T 3fro_A 344 GLVALEAMCLGAIPIASAV--GGLRDIIT-----NE-TGILVKAGDPGELANAILKALELSRSDLSKFRENCKKRAMSFS 415 (439)
T ss_dssp CHHHHHHHHTTCEEEEESS--THHHHHCC-----TT-TCEEECTTCHHHHHHHHHHHHHHTTTTTHHHHHHHHHHHHTSC
T ss_pred cHHHHHHHHCCCCeEEcCC--CCcceeEE-----cC-ceEEeCCCCHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHhhCc
Confidence 9999999999999999999 99999986 24 7899999999999999999999 99999999999887 7899
Q ss_pred chhhHHHHHHHHHHHHh
Q 011163 474 WDADCNDIHISAYTAIK 490 (492)
Q Consensus 474 w~~~a~~~~~~~Y~~l~ 490 (492)
|+.+++++ .++|+++.
T Consensus 416 ~~~~~~~~-~~~~~~~~ 431 (439)
T 3fro_A 416 WEKSAERY-VKAYTGSI 431 (439)
T ss_dssp HHHHHHHH-HHHHHTCS
T ss_pred HHHHHHHH-HHHHHHHH
Confidence 99999994 99999873
No 5
>2r60_A Glycosyl transferase, group 1; rossmann-fold; 1.80A {Halothermothrix orenii} PDB: 2r66_A* 2r68_A*
Probab=100.00 E-value=1.2e-46 Score=390.44 Aligned_cols=417 Identities=14% Similarity=0.162 Sum_probs=288.9
Q ss_pred CccccCCCceEEEEeeccccc---------cccCcHHHHHhHHHHHHHHCCCeEEEEeecCCCCC-cccccccceeeeee
Q 011163 1 MEKWLRNGFHIIHICTEMDPL---------VSIGSLASYVTGLSGALQRKGHLVEVILPKYACMN-LDGVQGLREIKAEC 70 (492)
Q Consensus 1 ~~~~~~~~mkIl~v~~~~~p~---------~~~GG~~~~~~~l~~~L~~~Gh~V~vi~~~~~~~~-~~~~~~~~~~~~~~ 70 (492)
|..+++ +|||++|+..++|. ...||+++++.+|+++|.++||+|+|+++...... ..+......
T Consensus 1 m~~m~~-~MkIl~i~~~~~P~~~~l~v~~~~~~GG~~~~~~~la~~L~~~G~~V~v~~~~~~~~~~~~~~~~~~~----- 74 (499)
T 2r60_A 1 MVEMTR-IKHVAFLNPQGNFDPADSYWTEHPDFGGQLVYVKEVSLALAEMGVQVDIITRRIKDENWPEFSGEIDY----- 74 (499)
T ss_dssp -------CCEEEEECCSSCCCTTCTTTTSBTTBSHHHHHHHHHHHHHHHTTCEEEEEEECCCBTTBGGGCCSEEE-----
T ss_pred Cccccc-cceEEEEecCCCccccccccCCCCCCCCeeehHHHHHHHHHhcCCeEEEEeCCCCcccccchhhhHHh-----
Confidence 455555 49999999988874 24699999999999999999999999998643211 110000000
Q ss_pred eeecCCeeeEEEEEEEEECCeEEEEEccCCCCCCccCCCCCCCCChhHHHHHHHHHHHHHHHHcCCCCCEEEEcCchhhh
Q 011163 71 YSYFNGQLHANKIWIGVVSGIGVTFIQPLHYSSFFNRESVYGYSDDFERFTYFSRASLDYIVKSRKQPDVLHIHNWETAI 150 (492)
Q Consensus 71 ~~~~~~~~~~~~~~~~~~~gv~v~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pDiVh~h~~~~~~ 150 (492)
. ...+|++++.++... ..++.....+ . .+..+...+.+++++...+|||||+|.+.+++
T Consensus 75 ---~-----------~~~~gv~v~~~~~~~-~~~~~~~~~~---~---~~~~~~~~l~~~l~~~~~~~Divh~~~~~~~~ 133 (499)
T 2r60_A 75 ---Y-----------QETNKVRIVRIPFGG-DKFLPKEELW---P---YLHEYVNKIINFYREEGKFPQVVTTHYGDGGL 133 (499)
T ss_dssp ---C-----------TTCSSEEEEEECCSC-SSCCCGGGCG---G---GHHHHHHHHHHHHHHHTCCCSEEEEEHHHHHH
T ss_pred ---c-----------cCCCCeEEEEecCCC-cCCcCHHHHH---H---HHHHHHHHHHHHHHhcCCCCCEEEEcCCcchH
Confidence 0 002578888886311 0011110111 0 11122344455555433589999999876655
Q ss_pred HHHHHHHHHhhcCCCCCcEEEEecCCCCCCCCCchhhhhcCCCccccCCCCcccCCCCCccchhhHHHHhhcCceeccCc
Q 011163 151 VGPLFWDIFVKQGLEGTRILLSCHNLNSLCLEHPDKLALCGLDPARLHRPDRLQDNTKTHLVNILKGGVVYSNKVVIVSS 230 (492)
Q Consensus 151 ~~~~~~~~~~~~~~~~~~~v~t~H~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ad~vi~vS~ 230 (492)
.+.++++. .++|+|+|+|+...... ..+...+.....+. ....+. ....+.+..++.+|.|+++|+
T Consensus 134 ~~~~~~~~------~~~p~v~~~H~~~~~~~---~~~~~~~~~~~~~~--~~~~~~---~~~~~~~~~~~~ad~vi~~S~ 199 (499)
T 2r60_A 134 AGVLLKNI------KGLPFTFTGHSLGAQKM---EKLNVNTSNFKEMD--ERFKFH---RRIIAERLTMSYADKIIVSTS 199 (499)
T ss_dssp HHHHHHHH------HCCCEEEECSSCHHHHH---HTTCCCSTTSHHHH--HHHCHH---HHHHHHHHHHHHCSEEEESSH
T ss_pred HHHHHHHh------cCCcEEEEccCcccccc---hhhccCCCCcchhh--hhHHHH---HHHHHHHHHHhcCCEEEECCH
Confidence 54544432 58899999998532100 00000000000000 000000 001234677899999999999
Q ss_pred cchhhhhhcc-cCCCccHHHhh----hcCCeeeecCCCCCCCcCCCCCcccccccCccCccChHHHHHHHHHHhC-----
Q 011163 231 MHSKGRIIRS-LSHGLESTLAI----HQDKLLVAPCGFDSSTWDPSNDKFLTENYCAEDMKGKTVCKVTLQQQLG----- 300 (492)
Q Consensus 231 ~~~~~~~~~~-~~~~l~~~~~~----~~~~~~vI~nGvd~~~f~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~lg----- 300 (492)
..++.+.... ++. . ...++.+||||+|.+.|.|.. ....+..+++++|
T Consensus 200 ~~~~~~~~~~~~g~-------~~~~~~~~ki~vi~ngvd~~~~~~~~---------------~~~~~~~~r~~~~~~~~~ 257 (499)
T 2r60_A 200 QERFGQYSHDLYRG-------AVNVEDDDKFSVIPPGVNTRVFDGEY---------------GDKIKAKITKYLERDLGS 257 (499)
T ss_dssp HHHHHTTTSGGGTT-------TCCTTCGGGEEECCCCBCTTTSSSCC---------------CHHHHHHHHHHHHHHSCG
T ss_pred HHHHHHHhhhcccc-------cccccCCCCeEEECCCcChhhcCccc---------------hhhhHHHHHHHhcccccc
Confidence 9887665420 210 1 246899999999998887652 2234567888888
Q ss_pred CCCCCCceEEEEEeccccccCHHHHHHHHHHHhHc---CcEEEEEecCCCh------------hHHHHHHHHHHHhCC-C
Q 011163 301 LSKDASTIVVGCIFSDVSDVFLENLKAVVRGAKMR---GIQFVFTGTNKLP------------SASRALVSFQEELKD-G 364 (492)
Q Consensus 301 ~~~~~~~~~i~~~grl~~~Kg~~~li~a~~~l~~~---~~~lvivG~g~~~------------~~~~~l~~~~~~~~~-~ 364 (492)
++.+ .++|+++||+.++||++.|++|+..+.+. ..+|+|+|+++.+ .+.+.+++++++++. +
T Consensus 258 ~~~~--~~~i~~vGrl~~~Kg~~~li~a~~~l~~~~~~~~~l~i~G~~~~~~~~y~~l~~~~~~y~~~l~~~~~~~~l~~ 335 (499)
T 2r60_A 258 ERME--LPAIIASSRLDQKKNHYGLVEAYVQNKELQDKANLVLTLRGIENPFEDYSRAGQEEKEILGKIIELIDNNDCRG 335 (499)
T ss_dssp GGTT--SCEEEECSCCCGGGCHHHHHHHHHTCHHHHHHCEEEEEESSCSBTTTBCTTSCHHHHHHHHHHHHHHHHTTCBT
T ss_pred cCCC--CcEEEEeecCccccCHHHHHHHHHHHHHhCCCceEEEEECCCCCcccccccccccchHHHHHHHHHHHhcCCCc
Confidence 6543 47899999999999999999999988753 4689999962111 126788888888754 7
Q ss_pred eEEEEeccCHHHHHHHHhcC----CEEEECCCCCCCchHHHHHhhcCCceEEEecCCCcccccccccccccceeeeeecC
Q 011163 365 IVIFVDSYDDALLHLIFSGS----DIILCHSFHDPLLQVPLKALKYGAAPIAVTSSDIEFRHFAEFDHESTRFSRFISST 440 (492)
Q Consensus 365 ~v~~~~~~~~~~~~~~~~~a----di~v~pS~~E~~glv~lEAma~G~PvV~~~~~~gg~~e~v~~~~~~~g~~G~~~~~ 440 (492)
+|.|+|.++.+++..+|+.| |++|+||.+|+||++++|||+||+|||+|+. ||+.|++. ++.+|+++++
T Consensus 336 ~V~~~G~v~~~~~~~~~~~a~~~~dv~v~pS~~Eg~~~~~lEAma~G~PvI~s~~--~g~~e~v~-----~~~~g~l~~~ 408 (499)
T 2r60_A 336 KVSMFPLNSQQELAGCYAYLASKGSVFALTSFYEPFGLAPVEAMASGLPAVVTRN--GGPAEILD-----GGKYGVLVDP 408 (499)
T ss_dssp TEEEEECCSHHHHHHHHHHHHHTTCEEEECCSCBCCCSHHHHHHHTTCCEEEESS--BHHHHHTG-----GGTSSEEECT
T ss_pred eEEECCCCCHHHHHHHHHhcCcCCCEEEECcccCCCCcHHHHHHHcCCCEEEecC--CCHHHHhc-----CCceEEEeCC
Confidence 89999999888899999999 9999999999999999999999999999999 99999987 3567999999
Q ss_pred CCHHHHHHHHHHHhcCHHHHHHHHHHHHh---ccCCchhhHHHHHHHHHHHHh
Q 011163 441 FGNISLSQALEEIKNNPLSWKRKIKDAML---QDFSWDADCNDIHISAYTAIK 490 (492)
Q Consensus 441 ~~~~~l~~ai~~~~~~~~~~~~~~~~a~~---~~fsw~~~a~~~~~~~Y~~l~ 490 (492)
.|+++|+++|..+++|++.+++++++++. ++|||+.+++++ .++|+++.
T Consensus 409 ~d~~~la~~i~~ll~~~~~~~~~~~~a~~~~~~~fs~~~~~~~~-~~~y~~~~ 460 (499)
T 2r60_A 409 EDPEDIARGLLKAFESEETWSAYQEKGKQRVEERYTWQETARGY-LEVIQEIA 460 (499)
T ss_dssp TCHHHHHHHHHHHHSCHHHHHHHHHHHHHHHHHHSBHHHHHHHH-HHHHHHHH
T ss_pred CCHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHhCCHHHHHHHH-HHHHHHHH
Confidence 99999999999999999999999998875 569999999995 99999874
No 6
>3c48_A Predicted glycosyltransferases; retaining glycosyltransferase, beta alpha beta, substrate AS catalysis; 2.10A {Corynebacterium glutamicum} PDB: 3c4v_A* 3c4q_A*
Probab=100.00 E-value=1.9e-45 Score=374.98 Aligned_cols=396 Identities=17% Similarity=0.201 Sum_probs=282.0
Q ss_pred cCCCceEEEEeecccccc-----ccCcHHHHHhHHHHHHHHCCCeEEEEeecCCCCCcccccccceeeeeeeeecCCeee
Q 011163 5 LRNGFHIIHICTEMDPLV-----SIGSLASYVTGLSGALQRKGHLVEVILPKYACMNLDGVQGLREIKAECYSYFNGQLH 79 (492)
Q Consensus 5 ~~~~mkIl~v~~~~~p~~-----~~GG~~~~~~~l~~~L~~~Gh~V~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 79 (492)
..++||||+|+..++|.. ..||+++++.+|+++|.++||+|+|+++........ .
T Consensus 17 ~~~mmkIl~i~~~~~p~~~~~~~~~GG~~~~~~~la~~L~~~G~~V~v~~~~~~~~~~~----~---------------- 76 (438)
T 3c48_A 17 RGSHMRVAMISMHTSPLQQPGTGDSGGMNVYILSTATELAKQGIEVDIYTRATRPSQGE----I---------------- 76 (438)
T ss_dssp --CCCEEEEECTTSCTTCC-------CHHHHHHHHHHHHHHTTCEEEEEEECCCGGGCS----E----------------
T ss_pred CcchheeeeEEeeccccccCCCCCCCCHHHHHHHHHHHHHhcCCEEEEEecCCCCCCcc----c----------------
Confidence 345699999999888842 369999999999999999999999999864321100 0
Q ss_pred EEEEEEEEECCeEEEEEccCCCCCCccCCCCCCCCChhHHHHHHHHHHHHH-HHHcCCCCCEEEEcCchhhhHHHHHHHH
Q 011163 80 ANKIWIGVVSGIGVTFIQPLHYSSFFNRESVYGYSDDFERFTYFSRASLDY-IVKSRKQPDVLHIHNWETAIVGPLFWDI 158 (492)
Q Consensus 80 ~~~~~~~~~~gv~v~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~pDiVh~h~~~~~~~~~~~~~~ 158 (492)
....+|++++.++... + .. ....+-...+..+...+.+. +++ ..+|||||+|.+.+++.+.++++.
T Consensus 77 -----~~~~~~v~v~~~~~~~---~-~~---~~~~~~~~~~~~~~~~~~~~~~~~-~~~~Div~~~~~~~~~~~~~~~~~ 143 (438)
T 3c48_A 77 -----VRVAENLRVINIAAGP---Y-EG---LSKEELPTQLAAFTGGMLSFTRRE-KVTYDLIHSHYWLSGQVGWLLRDL 143 (438)
T ss_dssp -----EEEETTEEEEEECCSC---S-SS---CCGGGGGGGHHHHHHHHHHHHHHH-TCCCSEEEEEHHHHHHHHHHHHHH
T ss_pred -----ccccCCeEEEEecCCC---c-cc---cchhHHHHHHHHHHHHHHHHHHhc-cCCCCEEEeCCccHHHHHHHHHHH
Confidence 0023688888775210 0 00 00000011122233344444 333 234999999987666554444332
Q ss_pred HhhcCCCCCcEEEEecCCCCCCCCCchhhhhcCCCccccCCCCcccCCCCCccchhhHHHHhhcCceeccCccchhhhhh
Q 011163 159 FVKQGLEGTRILLSCHNLNSLCLEHPDKLALCGLDPARLHRPDRLQDNTKTHLVNILKGGVVYSNKVVIVSSMHSKGRII 238 (492)
Q Consensus 159 ~~~~~~~~~~~v~t~H~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ad~vi~vS~~~~~~~~~ 238 (492)
.++|+|+++|+....... .+.. ....... ....+.+..++.+|.++++|+..++.+..
T Consensus 144 ------~~~p~v~~~h~~~~~~~~--------~~~~-----~~~~~~~---~~~~~~~~~~~~~d~ii~~s~~~~~~~~~ 201 (438)
T 3c48_A 144 ------WRIPLIHTAHTLAAVKNS--------YRDD-----SDTPESE---ARRICEQQLVDNADVLAVNTQEEMQDLMH 201 (438)
T ss_dssp ------HTCCEEEECSSCHHHHSC--------C---------CCHHHH---HHHHHHHHHHHHCSEEEESSHHHHHHHHH
T ss_pred ------cCCCEEEEecCCcccccc--------cccc-----cCCcchH---HHHHHHHHHHhcCCEEEEcCHHHHHHHHH
Confidence 588999999985321000 0000 0000000 01134566788999999999998876653
Q ss_pred cccCCCccHHHhhhcCCeeeecCCCCCCCcCCCCCcccccccCccCccChHHHHHHHHHHhCCCCCCCceEEEEEecccc
Q 011163 239 RSLSHGLESTLAIHQDKLLVAPCGFDSSTWDPSNDKFLTENYCAEDMKGKTVCKVTLQQQLGLSKDASTIVVGCIFSDVS 318 (492)
Q Consensus 239 ~~~~~~l~~~~~~~~~~~~vI~nGvd~~~f~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~lg~~~~~~~~~i~~~grl~~ 318 (492)
. ++ .+..++.+||||+|.+.|.+.. ...+..+++++|++.+ .++++++||+.+
T Consensus 202 ~-~g--------~~~~k~~vi~ngvd~~~~~~~~----------------~~~~~~~r~~~~~~~~--~~~i~~~G~~~~ 254 (438)
T 3c48_A 202 H-YD--------ADPDRISVVSPGADVELYSPGN----------------DRATERSRRELGIPLH--TKVVAFVGRLQP 254 (438)
T ss_dssp H-HC--------CCGGGEEECCCCCCTTTSCCC--------------------CHHHHHHTTCCSS--SEEEEEESCBSG
T ss_pred H-hC--------CChhheEEecCCccccccCCcc----------------cchhhhhHHhcCCCCC--CcEEEEEeeecc
Confidence 1 22 1457899999999988887652 1123447888998653 478999999999
Q ss_pred ccCHHHHHHHHHHHhHc----CcEEEEEecCCC-hhHHHHHHHHHHHhCC-CeEEEEeccCHHHHHHHHhcCCEEEECCC
Q 011163 319 DVFLENLKAVVRGAKMR----GIQFVFTGTNKL-PSASRALVSFQEELKD-GIVIFVDSYDDALLHLIFSGSDIILCHSF 392 (492)
Q Consensus 319 ~Kg~~~li~a~~~l~~~----~~~lvivG~g~~-~~~~~~l~~~~~~~~~-~~v~~~~~~~~~~~~~~~~~adi~v~pS~ 392 (492)
+||++.+++|++.+.+. +++|+|+|.... ..+.+.+++++++++. ++|.|+|..+.+++..+|+.||++|+||.
T Consensus 255 ~Kg~~~li~a~~~l~~~~p~~~~~l~i~G~~~~~g~~~~~l~~~~~~~~l~~~v~~~g~~~~~~~~~~~~~adv~v~ps~ 334 (438)
T 3c48_A 255 FKGPQVLIKAVAALFDRDPDRNLRVIICGGPSGPNATPDTYRHMAEELGVEKRIRFLDPRPPSELVAVYRAADIVAVPSF 334 (438)
T ss_dssp GGCHHHHHHHHHHHHHHCTTCSEEEEEECCBC------CHHHHHHHHTTCTTTEEEECCCCHHHHHHHHHHCSEEEECCS
T ss_pred cCCHHHHHHHHHHHHhhCCCcceEEEEEeCCCCCCcHHHHHHHHHHHcCCCCcEEEcCCCChHHHHHHHHhCCEEEECcc
Confidence 99999999999999853 689999996110 1345678888887753 78999998888889999999999999999
Q ss_pred CCCCchHHHHHhhcCCceEEEecCCCcccccccccccccceeeeeecCCCHHHHHHHHHHHhcCHHHHHHHHHHHHh--c
Q 011163 393 HDPLLQVPLKALKYGAAPIAVTSSDIEFRHFAEFDHESTRFSRFISSTFGNISLSQALEEIKNNPLSWKRKIKDAML--Q 470 (492)
Q Consensus 393 ~E~~glv~lEAma~G~PvV~~~~~~gg~~e~v~~~~~~~g~~G~~~~~~~~~~l~~ai~~~~~~~~~~~~~~~~a~~--~ 470 (492)
+|+||++++|||+||+|||+++. ||+.|++. ++.+|+++++.|+++|+++|..+++|++.+++++++++. +
T Consensus 335 ~e~~~~~~~Eama~G~PvI~~~~--~~~~e~i~-----~~~~g~~~~~~d~~~la~~i~~l~~~~~~~~~~~~~~~~~~~ 407 (438)
T 3c48_A 335 NESFGLVAMEAQASGTPVIAARV--GGLPIAVA-----EGETGLLVDGHSPHAWADALATLLDDDETRIRMGEDAVEHAR 407 (438)
T ss_dssp CCSSCHHHHHHHHTTCCEEEESC--TTHHHHSC-----BTTTEEEESSCCHHHHHHHHHHHHHCHHHHHHHHHHHHHHHH
T ss_pred ccCCchHHHHHHHcCCCEEecCC--CChhHHhh-----CCCcEEECCCCCHHHHHHHHHHHHcCHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999 99999987 356799999999999999999999999999999988875 4
Q ss_pred cCCchhhHHHHHHHHHHHHh
Q 011163 471 DFSWDADCNDIHISAYTAIK 490 (492)
Q Consensus 471 ~fsw~~~a~~~~~~~Y~~l~ 490 (492)
+|||+.+++++ .++|+++.
T Consensus 408 ~~s~~~~~~~~-~~~~~~~~ 426 (438)
T 3c48_A 408 TFSWAATAAQL-SSLYNDAI 426 (438)
T ss_dssp HHHHHHHHHHH-HHHHHHHH
T ss_pred hCCHHHHHHHH-HHHHHHHh
Confidence 49999999995 99999874
No 7
>3s28_A Sucrose synthase 1; glycosyltransferase, sucrose metabolism, sugar donar complex rossmann fold, GT-B fold, glycosyltansferase, UDP-glucose; HET: UDP LCN NHF; 2.80A {Arabidopsis thaliana} PDB: 3s27_A* 3s29_A*
Probab=100.00 E-value=4.9e-46 Score=397.52 Aligned_cols=429 Identities=12% Similarity=0.114 Sum_probs=284.4
Q ss_pred CCceEEEEeeccc---------cccccCcHHHHHhH--------HHHHHHHCCCeEE----EEeecCCCCCc-ccccccc
Q 011163 7 NGFHIIHICTEMD---------PLVSIGSLASYVTG--------LSGALQRKGHLVE----VILPKYACMNL-DGVQGLR 64 (492)
Q Consensus 7 ~~mkIl~v~~~~~---------p~~~~GG~~~~~~~--------l~~~L~~~Gh~V~----vi~~~~~~~~~-~~~~~~~ 64 (492)
+.|+|++|+...+ | .+||..+|+.+ |+++|+++||+|+ |+|...++... .+.....
T Consensus 277 ~~~~i~~is~hg~~~~~~~lG~~--dtGGq~vyV~e~~~al~~ela~~L~~~G~~V~~~V~v~Tr~~~~~~g~~y~~~~e 354 (816)
T 3s28_A 277 MVFNVVILSPHGYFAQDNVLGYP--DTGGQVVYILDQVRALEIEMLQRIKQQGLNIKPRILILTRLLPDAVGTTCGERLE 354 (816)
T ss_dssp CCCEEEEECCSSCCCSSSCTTST--TCSHHHHHHHHHHHHHHHHHHHHHHHTTCCCCCEEEEEEECCTTCTTSSTTSSEE
T ss_pred ceeEEEEEcCCcccCccccCCCC--CCCCceeeHHHHHHHHHHHHHHHHHHCCCccceeeEEEeCCCCCCCCCccCCcce
Confidence 3589999999876 5 57999999995 6667778999886 99987554211 0000000
Q ss_pred eeeeeeeeecCCeeeEEEEEEEEECCeEEEEEccCCC----CCCccCCCCCCCCChhHHHHHHH-HHHHHHHHHcCCCCC
Q 011163 65 EIKAECYSYFNGQLHANKIWIGVVSGIGVTFIQPLHY----SSFFNRESVYGYSDDFERFTYFS-RASLDYIVKSRKQPD 139 (492)
Q Consensus 65 ~~~~~~~~~~~~~~~~~~~~~~~~~gv~v~~i~~~~~----~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~pD 139 (492)
. .. ..+|+++++++.... ..+.++..++.+ +..|. ..+..++.....+||
T Consensus 355 ~--------i~-----------~~~gv~I~RvP~~~~~g~l~~~l~k~~L~~~------L~~F~~~~l~~il~~~~~~PD 409 (816)
T 3s28_A 355 R--------VY-----------DSEYCDILRVPFRTEKGIVRKWISRFEVWPY------LETYTEDAAVELSKELNGKPD 409 (816)
T ss_dssp E--------CT-----------TCSSEEEEEECEEETTEEECSCCCTTTCGGG------HHHHHHHHHHHHHHHCSSCCS
T ss_pred e--------ec-----------CcCCeEEEEecCCCccccccccccHHHHHHH------HHHHHHHHHHHHHHhcCCCCe
Confidence 0 00 125888888863111 112333333322 12233 334444444456899
Q ss_pred EEEEcCchhhhHHHHHHHHHhhcCCCCCcEEEEecCCCCCCCCCchhhhhcCCCccccCCCCcccCCCCCccchhhHHHH
Q 011163 140 VLHIHNWETAIVGPLFWDIFVKQGLEGTRILLSCHNLNSLCLEHPDKLALCGLDPARLHRPDRLQDNTKTHLVNILKGGV 219 (492)
Q Consensus 140 iVh~h~~~~~~~~~~~~~~~~~~~~~~~~~v~t~H~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 219 (492)
|||+|.|.+++++.++++. .++|+|+|.|++....... .+..+..+ ...+.........+.++
T Consensus 410 VIHsH~~~sglva~llar~------~gvP~V~T~Hsl~~~k~~~------~~~~~~~~-----~~~y~~~~r~~aE~~~l 472 (816)
T 3s28_A 410 LIIGNYSDGNLVASLLAHK------LGVTQCTIAHALEKTKYPD------SDIYWKKL-----DDKYHFSCQFTADIFAM 472 (816)
T ss_dssp EEEEEHHHHHHHHHHHHHH------HTCCEEEECSCCHHHHSTT------TTTTHHHH-----HHHHCHHHHHHHHHHHH
T ss_pred EEEeCCchHHHHHHHHHHH------cCCCEEEEEeccccccccc------ccchhhhH-----HHHHHHHHHHHHHHHHH
Confidence 9999998888886666553 5899999999753211000 00000000 00000000012245588
Q ss_pred hhcCceeccCccchhhhhhc--ccCC----CccHH------HhhhcCCeeeecCCCCCCCcCCCCCccc--ccccCccCc
Q 011163 220 VYSNKVVIVSSMHSKGRIIR--SLSH----GLEST------LAIHQDKLLVAPCGFDSSTWDPSNDKFL--TENYCAEDM 285 (492)
Q Consensus 220 ~~ad~vi~vS~~~~~~~~~~--~~~~----~l~~~------~~~~~~~~~vI~nGvd~~~f~p~~~~~~--~~~~~~~~~ 285 (492)
+.||.||++|+..++.+... .++. ++... +.....++.+||||+|.+.|.|...... ...+.. +
T Consensus 473 ~~AD~VIa~S~~~~~~l~~~~~~y~~~~~~~~p~Lyr~~~gI~~~~~ki~VIpnGVD~~~F~P~~~~~~Rl~~~~~~--i 550 (816)
T 3s28_A 473 NHTDFIITSTFQEIAGSKETVGQYESHTAFTLPGLYRVVHGIDVFDPKFNIVSPGADMSIYFPYTEEKRRLTKFHSE--I 550 (816)
T ss_dssp HHSSEEEESCHHHHHCCSSSCCTTGGGSSEEETTTEEEEESCCTTCTTEEECCCCCCTTTSCCTTCTTTCCGGGHHH--H
T ss_pred HhCCEEEECCHHHHHHHHHHHHHhhhhhccccchhhhcccccccCCCCEEEECCCcCHHHcCccchhhhhhhhcccc--c
Confidence 99999999999877653221 0100 00000 0012339999999999999988632100 000000 0
Q ss_pred cChHHHHHHHHHHhCCCCCCCceEEEEEeccccccCHHHHHHHHHHHhH--cCcEEEEEecCCC--------hhHHHHHH
Q 011163 286 KGKTVCKVTLQQQLGLSKDASTIVVGCIFSDVSDVFLENLKAVVRGAKM--RGIQFVFTGTNKL--------PSASRALV 355 (492)
Q Consensus 286 ~~~~~~~~~~~~~lg~~~~~~~~~i~~~grl~~~Kg~~~li~a~~~l~~--~~~~lvivG~g~~--------~~~~~~l~ 355 (492)
+....+....++.+|+..+.+.++|+++||+.+.||++.|++|+.++.+ .+++|+|+|+|++ ....+.++
T Consensus 551 ~~~l~~p~~~r~~lg~l~~~~~~vIl~vGRl~~~KGid~LIeA~~~L~~~~~~v~LvIvG~g~~~~~~~~e~~~~~~~L~ 630 (816)
T 3s28_A 551 EELLYSDVENKEHLCVLKDKKKPILFTMARLDRVKNLSGLVEWYGKNTRLRELANLVVVGGDRRKESKDNEEKAEMKKMY 630 (816)
T ss_dssp HHHHHCSCCBTTEESCBSCTTSCEEEEECCCCTTTTHHHHHHHHHHCHHHHHHCEEEEECCCTTSCCCCHHHHHHHHHHH
T ss_pred cccccchhhHHHHhcccCCCCCeEEEEEccCcccCCHHHHHHHHHHHHhhCCCeEEEEEeCCCcccccchhhHHHHHHHH
Confidence 0000000112345666434456899999999999999999999999875 3799999997751 12567788
Q ss_pred HHHHHhCC-CeEEEEecc----CHHHHHHHHh-cCCEEEECCCCCCCchHHHHHhhcCCceEEEecCCCccccccccccc
Q 011163 356 SFQEELKD-GIVIFVDSY----DDALLHLIFS-GSDIILCHSFHDPLLQVPLKALKYGAAPIAVTSSDIEFRHFAEFDHE 429 (492)
Q Consensus 356 ~~~~~~~~-~~v~~~~~~----~~~~~~~~~~-~adi~v~pS~~E~~glv~lEAma~G~PvV~~~~~~gg~~e~v~~~~~ 429 (492)
+++++++. ++|.|+|.. +.+++..+|+ +||++|+||.+|+||++++||||||+|||+|+. ||+.|+|.
T Consensus 631 ~li~~lgL~~~V~flG~~~~~v~~~eL~~~~~~aaDvfV~PS~~EgfglvllEAMA~G~PVIasd~--GG~~EiV~---- 704 (816)
T 3s28_A 631 DLIEEYKLNGQFRWISSQMDRVRNGELYRYICDTKGAFVQPALYEAFGLTVVEAMTCGLPTFATCK--GGPAEIIV---- 704 (816)
T ss_dssp HHHHHTTCBBBEEEECCCCCHHHHHHHHHHHHHTTCEEEECCSCBSSCHHHHHHHHTTCCEEEESS--BTHHHHCC----
T ss_pred HHHHHcCCCCcEEEccCccccCCHHHHHHHHHhcCeEEEECCCccCccHHHHHHHHcCCCEEEeCC--CChHHHHc----
Confidence 88888764 899999743 3466777777 789999999999999999999999999999999 99999987
Q ss_pred ccceeeeeecCCCHHHHHHHHHHHh----cCHHHHHHHHHHHHh---ccCCchhhHHHHHHHHHHHH
Q 011163 430 STRFSRFISSTFGNISLSQALEEIK----NNPLSWKRKIKDAML---QDFSWDADCNDIHISAYTAI 489 (492)
Q Consensus 430 ~~g~~G~~~~~~~~~~l~~ai~~~~----~~~~~~~~~~~~a~~---~~fsw~~~a~~~~~~~Y~~l 489 (492)
++.+|+++++.|+++++++|..++ +|++.+++++++|+. ++|||+.+++++ .++|+.+
T Consensus 705 -dg~~Gllv~p~D~e~LA~aI~~lL~~Ll~d~~~~~~m~~~ar~~a~~~fSwe~~a~~l-l~lY~~~ 769 (816)
T 3s28_A 705 -HGKSGFHIDPYHGDQAADTLADFFTKCKEDPSHWDEISKGGLQRIEEKYTWQIYSQRL-LTLTGVY 769 (816)
T ss_dssp -BTTTBEEECTTSHHHHHHHHHHHHHHHHHCTHHHHHHHHHHHHHHHHSCCHHHHHHHH-HHHHHHH
T ss_pred -cCCcEEEeCCCCHHHHHHHHHHHHHHhccCHHHHHHHHHHHHHHHHHhCCHHHHHHHH-HHHHHHH
Confidence 466899999999999999997666 899999999999976 789999999995 9999875
No 8
>3okp_A GDP-mannose-dependent alpha-(1-6)-phosphatidylino monomannoside mannosyltransferase...; GT-B fold, alpha-mannosyltransferase; HET: GDD; 2.00A {Corynebacterium glutamicum} PDB: 3okc_A* 3oka_A*
Probab=100.00 E-value=5e-44 Score=358.88 Aligned_cols=364 Identities=14% Similarity=0.141 Sum_probs=278.6
Q ss_pred CCceEEEEeeccccccccCcHHHHHhHHHHHHHHCCCeEEEEeecCCCCCcccccccceeeeeeeeecCCeeeEEEEEEE
Q 011163 7 NGFHIIHICTEMDPLVSIGSLASYVTGLSGALQRKGHLVEVILPKYACMNLDGVQGLREIKAECYSYFNGQLHANKIWIG 86 (492)
Q Consensus 7 ~~mkIl~v~~~~~p~~~~GG~~~~~~~l~~~L~~~Gh~V~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 86 (492)
++|||++|++.++|. .||+++++.+|+++| +||+|+|+++......... ..
T Consensus 3 ~~mkIl~v~~~~~p~--~gG~~~~~~~l~~~L--~g~~v~v~~~~~~~~~~~~---~~---------------------- 53 (394)
T 3okp_A 3 ASRKTLVVTNDFPPR--IGGIQSYLRDFIATQ--DPESIVVFASTQNAEEAHA---YD---------------------- 53 (394)
T ss_dssp -CCCEEEEESCCTTS--CSHHHHHHHHHHTTS--CGGGEEEEEECSSHHHHHH---HH----------------------
T ss_pred CCceEEEEeCccCCc--cchHHHHHHHHHHHh--cCCeEEEEECCCCccchhh---hc----------------------
Confidence 469999999988874 699999999999999 7999999998754321000 00
Q ss_pred EECCeEEEEEccCCCCCCccCCCCCCCCChhHHHHHHHHHHHHHHHHcCCCCCEEEEcCchh-hhHHHHHHHHHhhcCCC
Q 011163 87 VVSGIGVTFIQPLHYSSFFNRESVYGYSDDFERFTYFSRASLDYIVKSRKQPDVLHIHNWET-AIVGPLFWDIFVKQGLE 165 (492)
Q Consensus 87 ~~~gv~v~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pDiVh~h~~~~-~~~~~~~~~~~~~~~~~ 165 (492)
...+++++.++.. .... . ..+...+.+++++ .+||+||+|.... .+...++ +. .
T Consensus 54 ~~~~~~~~~~~~~---------~~~~---~----~~~~~~l~~~~~~--~~~Dvv~~~~~~~~~~~~~~~-~~------~ 108 (394)
T 3okp_A 54 KTLDYEVIRWPRS---------VMLP---T----PTTAHAMAEIIRE--REIDNVWFGAAAPLALMAGTA-KQ------A 108 (394)
T ss_dssp TTCSSEEEEESSS---------SCCS---C----HHHHHHHHHHHHH--TTCSEEEESSCTTGGGGHHHH-HH------T
T ss_pred cccceEEEEcccc---------cccc---c----hhhHHHHHHHHHh--cCCCEEEECCcchHHHHHHHH-Hh------c
Confidence 0136667766421 0010 0 1223445555554 6899999997433 3332332 22 4
Q ss_pred CCc-EEEEecCCCCCCCCCchhhhhcCCCccccCCCCcccCCCCCccchhhHHHHhhcCceeccCccchhhhhhcccCCC
Q 011163 166 GTR-ILLSCHNLNSLCLEHPDKLALCGLDPARLHRPDRLQDNTKTHLVNILKGGVVYSNKVVIVSSMHSKGRIIRSLSHG 244 (492)
Q Consensus 166 ~~~-~v~t~H~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ad~vi~vS~~~~~~~~~~~~~~~ 244 (492)
++| +|+++|+.... + .. .. .....++..++.+|.++++|+..++.+... ++
T Consensus 109 ~~~~~i~~~h~~~~~-------~---~~----------~~-----~~~~~~~~~~~~~d~ii~~s~~~~~~~~~~-~~-- 160 (394)
T 3okp_A 109 GASKVIASTHGHEVG-------W---SM----------LP-----GSRQSLRKIGTEVDVLTYISQYTLRRFKSA-FG-- 160 (394)
T ss_dssp TCSEEEEECCSTHHH-------H---TT----------SH-----HHHHHHHHHHHHCSEEEESCHHHHHHHHHH-HC--
T ss_pred CCCcEEEEeccchhh-------h---hh----------cc-----hhhHHHHHHHHhCCEEEEcCHHHHHHHHHh-cC--
Confidence 665 88899964310 0 00 00 012456778899999999999988776542 11
Q ss_pred ccHHHhhhcCCeeeecCCCCCCCcCCCCCcccccccCccCccChHHHHHHHHHHhCCCCCCCceEEEEEeccccccCHHH
Q 011163 245 LESTLAIHQDKLLVAPCGFDSSTWDPSNDKFLTENYCAEDMKGKTVCKVTLQQQLGLSKDASTIVVGCIFSDVSDVFLEN 324 (492)
Q Consensus 245 l~~~~~~~~~~~~vI~nGvd~~~f~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~lg~~~~~~~~~i~~~grl~~~Kg~~~ 324 (492)
.+.++.+||||+|.+.|.|. ....+..+++++|++.+ .++++++||+.+.||++.
T Consensus 161 -------~~~~~~vi~ngv~~~~~~~~----------------~~~~~~~~~~~~~~~~~--~~~i~~~G~~~~~Kg~~~ 215 (394)
T 3okp_A 161 -------SHPTFEHLPSGVDVKRFTPA----------------TPEDKSATRKKLGFTDT--TPVIACNSRLVPRKGQDS 215 (394)
T ss_dssp -------SSSEEEECCCCBCTTTSCCC----------------CHHHHHHHHHHTTCCTT--CCEEEEESCSCGGGCHHH
T ss_pred -------CCCCeEEecCCcCHHHcCCC----------------CchhhHHHHHhcCCCcC--ceEEEEEeccccccCHHH
Confidence 34789999999999888773 12356788999999754 478999999999999999
Q ss_pred HHHHHHHHhHc--CcEEEEEecCCChhHHHHHHHHHHHhCCCeEEEEeccCHHHHHHHHhcCCEEEECCCC-------CC
Q 011163 325 LKAVVRGAKMR--GIQFVFTGTNKLPSASRALVSFQEELKDGIVIFVDSYDDALLHLIFSGSDIILCHSFH-------DP 395 (492)
Q Consensus 325 li~a~~~l~~~--~~~lvivG~g~~~~~~~~l~~~~~~~~~~~v~~~~~~~~~~~~~~~~~adi~v~pS~~-------E~ 395 (492)
+++|++++.+. +++|+|+|+|+ ..+.+++++..+ .++|.++|..+.+++..+|+.||++|+||.+ |+
T Consensus 216 li~a~~~l~~~~~~~~l~i~G~g~---~~~~l~~~~~~~-~~~v~~~g~~~~~~~~~~~~~ad~~v~ps~~~~~~~~~e~ 291 (394)
T 3okp_A 216 LIKAMPQVIAARPDAQLLIVGSGR---YESTLRRLATDV-SQNVKFLGRLEYQDMINTLAAADIFAMPARTRGGGLDVEG 291 (394)
T ss_dssp HHHHHHHHHHHSTTCEEEEECCCT---THHHHHHHTGGG-GGGEEEEESCCHHHHHHHHHHCSEEEECCCCBGGGTBCCS
T ss_pred HHHHHHHHHhhCCCeEEEEEcCch---HHHHHHHHHhcc-cCeEEEcCCCCHHHHHHHHHhCCEEEecCccccccccccc
Confidence 99999998763 79999999764 356677776444 3799999999989999999999999999999 99
Q ss_pred CchHHHHHhhcCCceEEEecCCCcccccccccccccceeeeeecCCCHHHHHHHHHHHhcCHHHHHHHHHHHHh---ccC
Q 011163 396 LLQVPLKALKYGAAPIAVTSSDIEFRHFAEFDHESTRFSRFISSTFGNISLSQALEEIKNNPLSWKRKIKDAML---QDF 472 (492)
Q Consensus 396 ~glv~lEAma~G~PvV~~~~~~gg~~e~v~~~~~~~g~~G~~~~~~~~~~l~~ai~~~~~~~~~~~~~~~~a~~---~~f 472 (492)
||++++|||+||+|+|+++. ||..|++. ++ +|++++++|+++++++|..+++|++.+++++++++. ++|
T Consensus 292 ~~~~~~Ea~a~G~PvI~~~~--~~~~e~i~-----~~-~g~~~~~~d~~~l~~~i~~l~~~~~~~~~~~~~~~~~~~~~~ 363 (394)
T 3okp_A 292 LGIVYLEAQACGVPVIAGTS--GGAPETVT-----PA-TGLVVEGSDVDKLSELLIELLDDPIRRAAMGAAGRAHVEAEW 363 (394)
T ss_dssp SCHHHHHHHHTTCCEEECSS--TTGGGGCC-----TT-TEEECCTTCHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHHT
T ss_pred cCcHHHHHHHcCCCEEEeCC--CChHHHHh-----cC-CceEeCCCCHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHhC
Confidence 99999999999999999999 99999987 45 799999999999999999999999999999998875 579
Q ss_pred CchhhHHHHHHHHHHHHh
Q 011163 473 SWDADCNDIHISAYTAIK 490 (492)
Q Consensus 473 sw~~~a~~~~~~~Y~~l~ 490 (492)
||+.+++++ .++|+++.
T Consensus 364 s~~~~~~~~-~~~~~~~~ 380 (394)
T 3okp_A 364 SWEIMGERL-TNILQSEP 380 (394)
T ss_dssp BHHHHHHHH-HHHHHSCC
T ss_pred CHHHHHHHH-HHHHHHhc
Confidence 999999995 99999774
No 9
>2jjm_A Glycosyl transferase, group 1 family protein; anthrax, nucleotide, carbohydrate; 3.10A {Bacillus anthracis} PDB: 3mbo_A*
Probab=100.00 E-value=8.1e-43 Score=350.62 Aligned_cols=368 Identities=14% Similarity=0.132 Sum_probs=263.7
Q ss_pred ceEEEEeeccccccccCcHHHHHhHHHHHHHHCCCeEEEEeecCCCCCcccccccceeeeeeeeecCCeeeEEEEEEEEE
Q 011163 9 FHIIHICTEMDPLVSIGSLASYVTGLSGALQRKGHLVEVILPKYACMNLDGVQGLREIKAECYSYFNGQLHANKIWIGVV 88 (492)
Q Consensus 9 mkIl~v~~~~~p~~~~GG~~~~~~~l~~~L~~~Gh~V~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 88 (492)
|+--+... ++|. .||++.++.+|+++|.++||+|+|+++..+..... ..
T Consensus 14 ~~~~~~~~-~~p~--~GG~~~~~~~la~~L~~~G~~V~v~~~~~~~~~~~----------------------------~~ 62 (394)
T 2jjm_A 14 MKLKIGIT-CYPS--VGGSGVVGTELGKQLAERGHEIHFITSGLPFRLNK----------------------------VY 62 (394)
T ss_dssp -CCEEEEE-CCC----CHHHHHHHHHHHHHHHTTCEEEEECSSCC----C----------------------------CC
T ss_pred heeeeehh-cCCC--CCCHHHHHHHHHHHHHhCCCEEEEEeCCCCCcccc----------------------------cC
Confidence 44444444 3453 59999999999999999999999999754321100 01
Q ss_pred CCeEEEEEccCCCCCCccCCCCCCCCChhHHHHHHHHHHHHHHHHcCCCCCEEEEcCchhhhHHHHHHHHHhhcCCCCCc
Q 011163 89 SGIGVTFIQPLHYSSFFNRESVYGYSDDFERFTYFSRASLDYIVKSRKQPDVLHIHNWETAIVGPLFWDIFVKQGLEGTR 168 (492)
Q Consensus 89 ~gv~v~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pDiVh~h~~~~~~~~~~~~~~~~~~~~~~~~ 168 (492)
+++.++.++... + . .+.+. ... ..+...+.+.+++ .+|||||+|.......+.++.+... ..++|
T Consensus 63 ~~i~~~~~~~~~---~-~---~~~~~--~~~-~~~~~~l~~~l~~--~~~Dvv~~~~~~~~~~~~~~~~~~~---~~~~p 127 (394)
T 2jjm_A 63 PNIYFHEVTVNQ---Y-S---VFQYP--PYD-LALASKMAEVAQR--ENLDILHVHYAIPHAICAYLAKQMI---GERIK 127 (394)
T ss_dssp TTEEEECCCCC-----------CCSC--CHH-HHHHHHHHHHHHH--HTCSEEEECSSTTHHHHHHHHHHHT---TTCSE
T ss_pred CceEEEeccccc---c-c---ccccc--ccc-HHHHHHHHHHHHH--cCCCEEEEcchhHHHHHHHHHHHhh---cCCCC
Confidence 344444332100 0 0 01000 011 1223444455554 6899999997543333333333221 02689
Q ss_pred EEEEecCCCCCCCCCchhhhhcCCCccccCCCCcccCCCCCccchhhHHHHhhcCceeccCccchhhhhhcccCCCccHH
Q 011163 169 ILLSCHNLNSLCLEHPDKLALCGLDPARLHRPDRLQDNTKTHLVNILKGGVVYSNKVVIVSSMHSKGRIIRSLSHGLEST 248 (492)
Q Consensus 169 ~v~t~H~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ad~vi~vS~~~~~~~~~~~~~~~l~~~ 248 (492)
+|+++|+.... ..+.. . ....+.+..++.+|.++++|+..++.+... ++
T Consensus 128 ~v~~~h~~~~~---------~~~~~----------~-----~~~~~~~~~~~~ad~ii~~s~~~~~~~~~~-~~------ 176 (394)
T 2jjm_A 128 IVTTLHGTDIT---------VLGSD----------P-----SLNNLIRFGIEQSDVVTAVSHSLINETHEL-VK------ 176 (394)
T ss_dssp EEEECCHHHHH---------TTTTC----------T-----TTHHHHHHHHHHSSEEEESCHHHHHHHHHH-TC------
T ss_pred EEEEEecCccc---------ccCCC----------H-----HHHHHHHHHHhhCCEEEECCHHHHHHHHHh-hC------
Confidence 99999974210 00000 0 012456777899999999999988776542 21
Q ss_pred HhhhcCCeeeecCCCCCCCcCCCCCcccccccCccCccChHHHHHHHHHHhCCCCCCCceEEEEEeccccccCHHHHHHH
Q 011163 249 LAIHQDKLLVAPCGFDSSTWDPSNDKFLTENYCAEDMKGKTVCKVTLQQQLGLSKDASTIVVGCIFSDVSDVFLENLKAV 328 (492)
Q Consensus 249 ~~~~~~~~~vI~nGvd~~~f~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~lg~~~~~~~~~i~~~grl~~~Kg~~~li~a 328 (492)
.+.++.+||||+|.+.|.|. .+..+++++|++.+ .++++++||+.++||++.+++|
T Consensus 177 ---~~~~~~vi~ngv~~~~~~~~-------------------~~~~~~~~~~~~~~--~~~i~~~G~~~~~Kg~~~li~a 232 (394)
T 2jjm_A 177 ---PNKDIQTVYNFIDERVYFKR-------------------DMTQLKKEYGISES--EKILIHISNFRKVKRVQDVVQA 232 (394)
T ss_dssp ---CSSCEEECCCCCCTTTCCCC-------------------CCHHHHHHTTCC-----CEEEEECCCCGGGTHHHHHHH
T ss_pred ---CcccEEEecCCccHHhcCCc-------------------chHHHHHHcCCCCC--CeEEEEeeccccccCHHHHHHH
Confidence 24689999999998888765 22456778888643 4789999999999999999999
Q ss_pred HHHHhHc-CcEEEEEecCCChhHHHHHHHHHHHhCC-CeEEEEeccCHHHHHHHHhcCCEEEECCCCCCCchHHHHHhhc
Q 011163 329 VRGAKMR-GIQFVFTGTNKLPSASRALVSFQEELKD-GIVIFVDSYDDALLHLIFSGSDIILCHSFHDPLLQVPLKALKY 406 (492)
Q Consensus 329 ~~~l~~~-~~~lvivG~g~~~~~~~~l~~~~~~~~~-~~v~~~~~~~~~~~~~~~~~adi~v~pS~~E~~glv~lEAma~ 406 (492)
++.+.+. +++|+|+|+|+ ..+.+++++++++. ++|.|+|. .+++..+|+.||++|+||.+|+||++++|||+|
T Consensus 233 ~~~l~~~~~~~l~i~G~g~---~~~~l~~~~~~~~l~~~v~~~g~--~~~~~~~~~~adv~v~ps~~e~~~~~~~EAma~ 307 (394)
T 2jjm_A 233 FAKIVTEVDAKLLLVGDGP---EFCTILQLVKNLHIEDRVLFLGK--QDNVAELLAMSDLMLLLSEKESFGLVLLEAMAC 307 (394)
T ss_dssp HHHHHHSSCCEEEEECCCT---THHHHHHHHHTTTCGGGBCCCBS--CSCTHHHHHTCSEEEECCSCCSCCHHHHHHHHT
T ss_pred HHHHHhhCCCEEEEECCch---HHHHHHHHHHHcCCCCeEEEeCc--hhhHHHHHHhCCEEEeccccCCCchHHHHHHhc
Confidence 9999864 79999999764 35678888887753 78998874 344678999999999999999999999999999
Q ss_pred CCceEEEecCCCcccccccccccccceeeeeecCCCHHHHHHHHHHHhcCHHHHHHHHHHHHh---ccCCchhhHHHHHH
Q 011163 407 GAAPIAVTSSDIEFRHFAEFDHESTRFSRFISSTFGNISLSQALEEIKNNPLSWKRKIKDAML---QDFSWDADCNDIHI 483 (492)
Q Consensus 407 G~PvV~~~~~~gg~~e~v~~~~~~~g~~G~~~~~~~~~~l~~ai~~~~~~~~~~~~~~~~a~~---~~fsw~~~a~~~~~ 483 (492)
|+|+|+++. ||+.|++. ++.+|++++++|+++++++|..+++|++.+++++++++. ++|||+.+++++ +
T Consensus 308 G~PvI~~~~--~~~~e~v~-----~~~~g~~~~~~d~~~la~~i~~l~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~-~ 379 (394)
T 2jjm_A 308 GVPCIGTRV--GGIPEVIQ-----HGDTGYLCEVGDTTGVADQAIQLLKDEELHRNMGERARESVYEQFRSEKIVSQY-E 379 (394)
T ss_dssp TCCEEEECC--TTSTTTCC-----BTTTEEEECTTCHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHSCHHHHHHHH-H
T ss_pred CCCEEEecC--CChHHHhh-----cCCceEEeCCCCHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHhCCHHHHHHHH-H
Confidence 999999999 99999987 356799999999999999999999999999999988875 789999999995 9
Q ss_pred HHHHHHh
Q 011163 484 SAYTAIK 490 (492)
Q Consensus 484 ~~Y~~l~ 490 (492)
++|+++.
T Consensus 380 ~~~~~~~ 386 (394)
T 2jjm_A 380 TIYYDVL 386 (394)
T ss_dssp HHHHHTC
T ss_pred HHHHHHH
Confidence 9999873
No 10
>2x6q_A Trehalose-synthase TRET; biosynthetic protein; 2.20A {Pyrococcus horikoshii} PDB: 2x6r_A 2xa1_A 2xa2_A* 2xa9_A* 2xmp_A*
Probab=100.00 E-value=4.9e-42 Score=347.40 Aligned_cols=365 Identities=12% Similarity=0.106 Sum_probs=258.0
Q ss_pred CCCceEEEEeeccccccccCcHHHHHhHHHHHHHHCCCeEEEEeecCCCCCcccccccceeeeeeeeecCCeeeEEEEEE
Q 011163 6 RNGFHIIHICTEMDPLVSIGSLASYVTGLSGALQRKGHLVEVILPKYACMNLDGVQGLREIKAECYSYFNGQLHANKIWI 85 (492)
Q Consensus 6 ~~~mkIl~v~~~~~p~~~~GG~~~~~~~l~~~L~~~Gh~V~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 85 (492)
.++|||+++++. + ..||+++++.+|+++|.++||+|++++.............+..
T Consensus 38 ~~~mkIl~v~~~--~--~~GG~~~~~~~l~~~L~~~G~~v~v~~~~~~~~~~~~~~~~~~-------------------- 93 (416)
T 2x6q_A 38 LKGRSFVHVNST--S--FGGGVAEILHSLVPLLRSIGIEARWFVIEGPTEFFNVTKTFHN-------------------- 93 (416)
T ss_dssp TTTCEEEEEESC--S--SSSTHHHHHHHHHHHHHHTTCEEEEEECCCCHHHHHHHHHHHH--------------------
T ss_pred hhccEEEEEeCC--C--CCCCHHHHHHHHHHHHHhCCCeEEEEEccCCcchhhhhcccce--------------------
Confidence 356999999985 2 3599999999999999999999999987533110000000000
Q ss_pred EEECCeEEEEEccCCCCCCccCCCCCCCCChhHH-HHHHHHHHHHHHHHcCCCCCEEEEcCchhhhHHHHHHHHHhhcCC
Q 011163 86 GVVSGIGVTFIQPLHYSSFFNRESVYGYSDDFER-FTYFSRASLDYIVKSRKQPDVLHIHNWETAIVGPLFWDIFVKQGL 164 (492)
Q Consensus 86 ~~~~gv~v~~i~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~pDiVh~h~~~~~~~~~~~~~~~~~~~~ 164 (492)
.+.+.+ .+.+.....+ +..+...+.+.++ ..+|||||+|++.......++ +
T Consensus 94 -~~~~~~-----------------~~~~~~~~~~~~~~~~~~~~~~l~--~~~~Dvv~~~~~~~~~~~~~~-~------- 145 (416)
T 2x6q_A 94 -ALQGNE-----------------SLKLTEEMKELYLNVNRENSKFID--LSSFDYVLVHDPQPAALIEFY-E------- 145 (416)
T ss_dssp -HHTTCC-----------------SCCCCHHHHHHHHHHHHHHHHSSC--GGGSSEEEEESSTTGGGGGGS-C-------
T ss_pred -eecccc-----------------cccccHHHHHHHHHHHHHHHHHHh--hcCCCEEEEeccchhhHHHHH-H-------
Confidence 000110 0111110011 1111122222221 348999999986543332221 1
Q ss_pred CCCcEEEEecCCCCCCCCCchhhhhcCCCccccCCCCcccCCCCCccchhhHHHHhhcCcee-ccCccchhhhhhcccCC
Q 011163 165 EGTRILLSCHNLNSLCLEHPDKLALCGLDPARLHRPDRLQDNTKTHLVNILKGGVVYSNKVV-IVSSMHSKGRIIRSLSH 243 (492)
Q Consensus 165 ~~~~~v~t~H~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ad~vi-~vS~~~~~~~~~~~~~~ 243 (492)
..+|+|++.|+..... . . ....+++..+..+|.++ ++|+...+.+
T Consensus 146 ~~~p~v~~~h~~~~~~---~----------~--------------~~~~~~~~~~~~~~~~i~~~s~~~~~~~------- 191 (416)
T 2x6q_A 146 KKSPWLWRCHIDLSSP---N----------R--------------EFWEFLRRFVEKYDRYIFHLPEYVQPEL------- 191 (416)
T ss_dssp CCSCEEEECCSCCSSC---C----------H--------------HHHHHHHHHHTTSSEEEESSGGGSCTTS-------
T ss_pred hcCCEEEEEccccCCc---c----------H--------------HHHHHHHHHHHhCCEEEEechHHHHhhC-------
Confidence 2389999999743210 0 0 01133455566778776 5555433211
Q ss_pred CccHHHhhhcCCeeeecCCCCCCCcCCCCCcccccccCccCccChHHHHHHHHHHhCCCCCCCceEEEEEeccccccCHH
Q 011163 244 GLESTLAIHQDKLLVAPCGFDSSTWDPSNDKFLTENYCAEDMKGKTVCKVTLQQQLGLSKDASTIVVGCIFSDVSDVFLE 323 (492)
Q Consensus 244 ~l~~~~~~~~~~~~vI~nGvd~~~f~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~lg~~~~~~~~~i~~~grl~~~Kg~~ 323 (492)
...++.+||||+|...|.+.. ..+..+..+++++|++.+ .++++++||+.++||++
T Consensus 192 --------~~~~~~vi~ngvd~~~~~~~~--------------~~~~~~~~~r~~~~~~~~--~~~i~~vGrl~~~Kg~~ 247 (416)
T 2x6q_A 192 --------DRNKAVIMPPSIDPLSEKNVE--------------LKQTEILRILERFDVDPE--KPIITQVSRFDPWKGIF 247 (416)
T ss_dssp --------CTTTEEECCCCBCTTSTTTSC--------------CCHHHHHHHHHHTTCCTT--SCEEEEECCCCTTSCHH
T ss_pred --------CccceEEeCCCCChhhhcccc--------------cChhhHHHHHHHhCCCCC--CcEEEEEeccccccCHH
Confidence 236899999999987665421 122356678899998754 47899999999999999
Q ss_pred HHHHHHHHHhHc--CcEEEEEecCCC--hhHHHHHHHHHHHhCC-CeEEEEecc---CHHHHHHHHhcCCEEEECCCCCC
Q 011163 324 NLKAVVRGAKMR--GIQFVFTGTNKL--PSASRALVSFQEELKD-GIVIFVDSY---DDALLHLIFSGSDIILCHSFHDP 395 (492)
Q Consensus 324 ~li~a~~~l~~~--~~~lvivG~g~~--~~~~~~l~~~~~~~~~-~~v~~~~~~---~~~~~~~~~~~adi~v~pS~~E~ 395 (492)
.|++|++.+.+. +++|+|+|+|+. ++..+.++++++.++. ++|.|+|.+ +.+++..+|+.||++|+||.+|+
T Consensus 248 ~li~a~~~l~~~~~~~~l~i~G~g~~~~~~~~~~l~~~~~~~~~~~~V~~~G~~~~~~~~~~~~~~~~ad~~v~ps~~E~ 327 (416)
T 2x6q_A 248 DVIEIYRKVKEKIPGVQLLLVGVMAHDDPEGWIYFEKTLRKIGEDYDVKVLTNLIGVHAREVNAFQRASDVILQMSIREG 327 (416)
T ss_dssp HHHHHHHHHHHHCTTCEEEEEECCCTTCHHHHHHHHHHHHHHTTCTTEEEEEGGGTCCHHHHHHHHHHCSEEEECCSSCS
T ss_pred HHHHHHHHHHHhCCCeEEEEEecCcccchhHHHHHHHHHHHhCCCCcEEEecccCCCCHHHHHHHHHhCCEEEECCCcCC
Confidence 999999999763 799999998753 3456678888887754 799999854 36788899999999999999999
Q ss_pred CchHHHHHhhcCCceEEEecCCCcccccccccccccceeeeeecCCCHHHHHHHHHHHhcCHHHHHHHHHHHHh---ccC
Q 011163 396 LLQVPLKALKYGAAPIAVTSSDIEFRHFAEFDHESTRFSRFISSTFGNISLSQALEEIKNNPLSWKRKIKDAML---QDF 472 (492)
Q Consensus 396 ~glv~lEAma~G~PvV~~~~~~gg~~e~v~~~~~~~g~~G~~~~~~~~~~l~~ai~~~~~~~~~~~~~~~~a~~---~~f 472 (492)
||++++|||+||+|||+++. ||++|++.+ +.+|++++ |+++++++|..+++|++.+++++++++. ++|
T Consensus 328 ~~~~~lEAma~G~PvI~~~~--~g~~e~i~~-----~~~g~l~~--d~~~la~~i~~ll~~~~~~~~~~~~a~~~~~~~f 398 (416)
T 2x6q_A 328 FGLTVTEAMWKGKPVIGRAV--GGIKFQIVD-----GETGFLVR--DANEAVEVVLYLLKHPEVSKEMGAKAKERVRKNF 398 (416)
T ss_dssp SCHHHHHHHHTTCCEEEESC--HHHHHHCCB-----TTTEEEES--SHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHT
T ss_pred CccHHHHHHHcCCCEEEccC--CCChhheec-----CCCeEEEC--CHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHc
Confidence 99999999999999999999 999999873 56799997 9999999999999999999999998875 589
Q ss_pred CchhhHHHHHHHHHHHHh
Q 011163 473 SWDADCNDIHISAYTAIK 490 (492)
Q Consensus 473 sw~~~a~~~~~~~Y~~l~ 490 (492)
||+.+++++ .++|+++.
T Consensus 399 s~~~~~~~~-~~~~~~l~ 415 (416)
T 2x6q_A 399 IITKHMERY-LDILNSLG 415 (416)
T ss_dssp BHHHHHHHH-HHHHHTC-
T ss_pred CHHHHHHHH-HHHHHHhh
Confidence 999999994 99998763
No 11
>2iw1_A Lipopolysaccharide core biosynthesis protein RFAG; transferase, lipopolysaccharide biosynthesis, family GT-4, glycosyltransferase, LPS; HET: U2F; 1.5A {Escherichia coli} SCOP: c.87.1.8 PDB: 2iv7_A*
Probab=100.00 E-value=1e-42 Score=346.98 Aligned_cols=362 Identities=11% Similarity=0.093 Sum_probs=261.2
Q ss_pred ceEEEEeeccccccccCcHHHHHhHHHHHHHHCCCeEEEEeecCCCCCcccccccceeeeeeeeecCCeeeEEEEEEEEE
Q 011163 9 FHIIHICTEMDPLVSIGSLASYVTGLSGALQRKGHLVEVILPKYACMNLDGVQGLREIKAECYSYFNGQLHANKIWIGVV 88 (492)
Q Consensus 9 mkIl~v~~~~~p~~~~GG~~~~~~~l~~~L~~~Gh~V~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 88 (492)
|||++++..++| .||.++++.+|+++|.++||+|+|+++...... .
T Consensus 1 MkIl~i~~~~~~---~gG~~~~~~~l~~~L~~~G~~V~v~~~~~~~~~-------------------------------~ 46 (374)
T 2iw1_A 1 MIVAFCLYKYFP---FGGLQRDFMRIASTVAARGHHVRVYTQSWEGDC-------------------------------P 46 (374)
T ss_dssp -CEEEECSEECT---TCHHHHHHHHHHHHHHHTTCCEEEEESEECSCC-------------------------------C
T ss_pred CeEEEEEeecCC---CcchhhHHHHHHHHHHhCCCeEEEEecCCCCCC-------------------------------C
Confidence 899999987776 499999999999999999999999997532110 1
Q ss_pred CCeEEEEEccCCCCCCccCCCCCCCCChhHHHHHHHHHHHHHHHHcCCCCCEEEEcCchhhhHHHHHHHHHhhcCCCCCc
Q 011163 89 SGIGVTFIQPLHYSSFFNRESVYGYSDDFERFTYFSRASLDYIVKSRKQPDVLHIHNWETAIVGPLFWDIFVKQGLEGTR 168 (492)
Q Consensus 89 ~gv~v~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pDiVh~h~~~~~~~~~~~~~~~~~~~~~~~~ 168 (492)
+|++++.++. + . .....+...+...+.+.+++ .+|||||+|.+..++...+. .+...++
T Consensus 47 ~~~~v~~~~~---~------~----~~~~~~~~~~~~~l~~~i~~--~~~Dvv~~~~~~~~~~~~~~------~~~~~~~ 105 (374)
T 2iw1_A 47 KAFELIQVPV---K------S----HTNHGRNAEYYAWVQNHLKE--HPADRVVGFNKMPGLDVYFA------ADVCYAE 105 (374)
T ss_dssp TTCEEEECCC---C------C----SSHHHHHHHHHHHHHHHHHH--SCCSEEEESSCCTTCSEEEC------CSCCHHH
T ss_pred CCcEEEEEcc---C------c----ccchhhHHHHHHHHHHHHhc--cCCCEEEEecCCCCceeeec------cccccce
Confidence 3566665541 0 0 01122223334445555554 68999999985433221100 0012234
Q ss_pred EEEEecCCCCCCCCCchhhhhcCCCccccCCCCcccCCCCCccchhhHHHHh--hcCceeccCccchhhhhhcccCCCcc
Q 011163 169 ILLSCHNLNSLCLEHPDKLALCGLDPARLHRPDRLQDNTKTHLVNILKGGVV--YSNKVVIVSSMHSKGRIIRSLSHGLE 246 (492)
Q Consensus 169 ~v~t~H~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~ad~vi~vS~~~~~~~~~~~~~~~l~ 246 (492)
.+.+.|+... . ... .... ...+.+..+. .+|.++++|+..++.+... ++
T Consensus 106 ~~~~~~~~~~----------~--~~~-------~~~~-----~~~~~~~~~~~~~~d~ii~~s~~~~~~~~~~-~~---- 156 (374)
T 2iw1_A 106 KVAQEKGFLY----------R--LTS-------RYRH-----YAAFERATFEQGKSTKLMMLTDKQIADFQKH-YQ---- 156 (374)
T ss_dssp HHHHHCCHHH----------H--TSH-------HHHH-----HHHHHHHHHSTTCCCEEEESCHHHHHHHHHH-HC----
T ss_pred eeeecccchh----------h--hcH-------HHHH-----HHHHHHHHhhccCCcEEEEcCHHHHHHHHHH-hC----
Confidence 4444443110 0 000 0000 0122333333 6999999999988766542 22
Q ss_pred HHHhhhcCCeeeecCCCCCCCcCCCCCcccccccCccCccChHHHHHHHHHHhCCCCCCCceEEEEEeccccccCHHHHH
Q 011163 247 STLAIHQDKLLVAPCGFDSSTWDPSNDKFLTENYCAEDMKGKTVCKVTLQQQLGLSKDASTIVVGCIFSDVSDVFLENLK 326 (492)
Q Consensus 247 ~~~~~~~~~~~vI~nGvd~~~f~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~lg~~~~~~~~~i~~~grl~~~Kg~~~li 326 (492)
.+..++.+||||+|.+.|.|.. ....+..+++++|++.+ .++++++||+.++||++.++
T Consensus 157 ----~~~~~~~vi~ngv~~~~~~~~~---------------~~~~~~~~~~~~~~~~~--~~~i~~~G~~~~~K~~~~li 215 (374)
T 2iw1_A 157 ----TEPERFQILPPGIYPDRKYSEQ---------------IPNSREIYRQKNGIKEQ--QNLLLQVGSDFGRKGVDRSI 215 (374)
T ss_dssp ----CCGGGEEECCCCCCGGGSGGGS---------------CTTHHHHHHHHTTCCTT--CEEEEEECSCTTTTTHHHHH
T ss_pred ----CChhheEEecCCcCHHhcCccc---------------chhHHHHHHHHhCCCCC--CeEEEEeccchhhcCHHHHH
Confidence 1457899999999988776542 11245678899998753 47899999999999999999
Q ss_pred HHHHHHhHc---CcEEEEEecCCChhHHHHHHHHHHHhCC-CeEEEEeccCHHHHHHHHhcCCEEEECCCCCCCchHHHH
Q 011163 327 AVVRGAKMR---GIQFVFTGTNKLPSASRALVSFQEELKD-GIVIFVDSYDDALLHLIFSGSDIILCHSFHDPLLQVPLK 402 (492)
Q Consensus 327 ~a~~~l~~~---~~~lvivG~g~~~~~~~~l~~~~~~~~~-~~v~~~~~~~~~~~~~~~~~adi~v~pS~~E~~glv~lE 402 (492)
+|++.+.+. +++|+|+|+|+. +.+++++++++. ++|.++|. . +++..+|+.||++|+||.+|+||++++|
T Consensus 216 ~a~~~l~~~~~~~~~l~i~G~g~~----~~~~~~~~~~~~~~~v~~~g~-~-~~~~~~~~~ad~~v~ps~~e~~~~~~~E 289 (374)
T 2iw1_A 216 EALASLPESLRHNTLLFVVGQDKP----RKFEALAEKLGVRSNVHFFSG-R-NDVSELMAAADLLLHPAYQEAAGIVLLE 289 (374)
T ss_dssp HHHHTSCHHHHHTEEEEEESSSCC----HHHHHHHHHHTCGGGEEEESC-C-SCHHHHHHHCSEEEECCSCCSSCHHHHH
T ss_pred HHHHHhHhccCCceEEEEEcCCCH----HHHHHHHHHcCCCCcEEECCC-c-ccHHHHHHhcCEEEeccccCCcccHHHH
Confidence 999988653 899999997642 456777777653 78999875 3 4467899999999999999999999999
Q ss_pred HhhcCCceEEEecCCCcccccccccccccceeeeeec-CCCHHHHHHHHHHHhcCHHHHHHHHHHHHh--ccCCchhhHH
Q 011163 403 ALKYGAAPIAVTSSDIEFRHFAEFDHESTRFSRFISS-TFGNISLSQALEEIKNNPLSWKRKIKDAML--QDFSWDADCN 479 (492)
Q Consensus 403 Ama~G~PvV~~~~~~gg~~e~v~~~~~~~g~~G~~~~-~~~~~~l~~ai~~~~~~~~~~~~~~~~a~~--~~fsw~~~a~ 479 (492)
||+||+|+|+++. ||..|++. ++.+|++++ ++|+++++++|..+++|++.+++++++++. ++|+|+..++
T Consensus 290 a~a~G~Pvi~~~~--~~~~e~i~-----~~~~g~~~~~~~~~~~l~~~i~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 362 (374)
T 2iw1_A 290 AITAGLPVLTTAV--CGYAHYIA-----DANCGTVIAEPFSQEQLNEVLRKALTQSPLRMAWAENARHYADTQDLYSLPE 362 (374)
T ss_dssp HHHHTCCEEEETT--STTTHHHH-----HHTCEEEECSSCCHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHSCCSCHHH
T ss_pred HHHCCCCEEEecC--CCchhhhc-----cCCceEEeCCCCCHHHHHHHHHHHHcChHHHHHHHHHHHHHHHHhhHHHHHH
Confidence 9999999999999 99999987 356799997 899999999999999999999999999876 6789999999
Q ss_pred HHHHHHHHHH
Q 011163 480 DIHISAYTAI 489 (492)
Q Consensus 480 ~~~~~~Y~~l 489 (492)
++ .++++..
T Consensus 363 ~~-~~~l~~~ 371 (374)
T 2iw1_A 363 KA-ADIITGG 371 (374)
T ss_dssp HH-HHHHHCC
T ss_pred HH-HHHHHHh
Confidence 95 8888754
No 12
>3oy2_A Glycosyltransferase B736L; rossmann fold, GDP-mannose, sugar, VIRU proteins, viral protein,transferase; 2.31A {Paramecium bursaria chlorella virus NY} PDB: 3oy7_A*
Probab=100.00 E-value=1.9e-40 Score=335.45 Aligned_cols=360 Identities=12% Similarity=0.056 Sum_probs=257.1
Q ss_pred ceEEEEeeccccccccCcHHHHHhHHHHHHHHCCCeEEEEeecCCCCCcccccccceeeeeeeeecCCeeeEEEEEEEEE
Q 011163 9 FHIIHICTEMDPLVSIGSLASYVTGLSGALQRKGHLVEVILPKYACMNLDGVQGLREIKAECYSYFNGQLHANKIWIGVV 88 (492)
Q Consensus 9 mkIl~v~~~~~p~~~~GG~~~~~~~l~~~L~~~Gh~V~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 88 (492)
|||++|++. +|. .||+++++.+|+++|.++ |+|+|++.........
T Consensus 1 MkI~~v~~~-~p~--~gG~~~~~~~l~~~L~~~-~~V~v~~~~~~g~~~~------------------------------ 46 (413)
T 3oy2_A 1 MKLIIVGAH-SSV--PSGYGRVMRAIVPRISKA-HEVIVFGIHAFGRSVH------------------------------ 46 (413)
T ss_dssp CEEEEEEEC-TTC--CSHHHHHHHHHHHHHTTT-SEEEEEEESCCSCCSC------------------------------
T ss_pred CeEEEecCC-CCC--CCCHHHHHHHHHHHHHhc-CCeEEEeecCCCcccc------------------------------
Confidence 999999985 453 599999999999999999 9999999754311100
Q ss_pred CCeEEEEEccCCCCCCccCCCCCCCCChhHHHHHHHHHHHHHHHHcCCCCCEEEEcCchhhhHHHHHHHHHhhcCCC-CC
Q 011163 89 SGIGVTFIQPLHYSSFFNRESVYGYSDDFERFTYFSRASLDYIVKSRKQPDVLHIHNWETAIVGPLFWDIFVKQGLE-GT 167 (492)
Q Consensus 89 ~gv~v~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pDiVh~h~~~~~~~~~~~~~~~~~~~~~-~~ 167 (492)
.....+..... .......+..+. ...+.+.+++ .+|||||+|.+...+. .++.... +.. ..
T Consensus 47 ~~~~~~~~~~~---~~~~~~~~~~~~---------~~~l~~~l~~--~~~Div~~~~~~~~~~-~~~~~~~---~~~~~~ 108 (413)
T 3oy2_A 47 ANIEEFDAQTA---EHVRGLNEQGFY---------YSGLSEFIDV--HKPDIVMIYNDPIVIG-NYLLAMG---KCSHRT 108 (413)
T ss_dssp SSSEEEEHHHH---HHHTTCCSTTCC---------HHHHHHHHHH--HCCSEEEEEECHHHHH-HHHHHGG---GCCSCC
T ss_pred cccccCCcccc---ccccccccccch---------HHHHHHHHHh--cCCCEEEEcchHHHHH-HHHHHhc---cCCCCC
Confidence 00010000000 000000000100 1223333443 5899999997654333 3332221 111 23
Q ss_pred cEEEEecCCCCCCCCCchhhhhcCCCccccCCCCcccCCCCCccchhhHHHHhhcC--ceeccCccchhhhhhcccCCCc
Q 011163 168 RILLSCHNLNSLCLEHPDKLALCGLDPARLHRPDRLQDNTKTHLVNILKGGVVYSN--KVVIVSSMHSKGRIIRSLSHGL 245 (492)
Q Consensus 168 ~~v~t~H~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ad--~vi~vS~~~~~~~~~~~~~~~l 245 (492)
+++.+.|...... ...++..++.+| .++++|+..++.+.. ++
T Consensus 109 ~~~~~~~~~~~~~-------------------------------~~~~~~~~~~~~~~~ii~~S~~~~~~~~~--~~--- 152 (413)
T 3oy2_A 109 KIVLYVDLVSKNI-------------------------------RENLWWIFSHPKVVGVMAMSKCWISDICN--YG--- 152 (413)
T ss_dssp EEEEEECCCSBSC-------------------------------CGGGGGGGGCTTEEEEEESSTHHHHHHHH--TT---
T ss_pred ceeeeccccchhh-------------------------------HHHHHHHHhccCCceEEEcCHHHHHHHHH--cC---
Confidence 5566666421100 011234567778 999999998887765 32
Q ss_pred cHHHhhhcCCeeeecCCCCCCCcCCCCCcccccccCccCccChHHHHHHHHHHhCCCCCCCceEEEEEeccccccCHHHH
Q 011163 246 ESTLAIHQDKLLVAPCGFDSSTWDPSNDKFLTENYCAEDMKGKTVCKVTLQQQLGLSKDASTIVVGCIFSDVSDVFLENL 325 (492)
Q Consensus 246 ~~~~~~~~~~~~vI~nGvd~~~f~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~lg~~~~~~~~~i~~~grl~~~Kg~~~l 325 (492)
.+.++.+||||+|.+.|. ..+++++++.+.+.++|+++||+.++||++.|
T Consensus 153 ------~~~~~~vi~ngvd~~~~~------------------------~~~~~~~~~~~~~~~~il~vGr~~~~Kg~~~l 202 (413)
T 3oy2_A 153 ------CKVPINIVSHFVDTKTIY------------------------DARKLVGLSEYNDDVLFLNMNRNTARKRLDIY 202 (413)
T ss_dssp ------CCSCEEECCCCCCCCCCT------------------------THHHHTTCGGGTTSEEEECCSCSSGGGTHHHH
T ss_pred ------CCCceEEeCCCCCHHHHH------------------------HHHHhcCCCcccCceEEEEcCCCchhcCcHHH
Confidence 257899999999987661 14567777653346889999999999999999
Q ss_pred HHHHHHHhH--cCcEEEEEecCCCh---hHHHHHHHHHHHhCC-Ce-------EEEEeccCHHHHHHHHhcCCEEEECCC
Q 011163 326 KAVVRGAKM--RGIQFVFTGTNKLP---SASRALVSFQEELKD-GI-------VIFVDSYDDALLHLIFSGSDIILCHSF 392 (492)
Q Consensus 326 i~a~~~l~~--~~~~lvivG~g~~~---~~~~~l~~~~~~~~~-~~-------v~~~~~~~~~~~~~~~~~adi~v~pS~ 392 (492)
++|+.++.+ .+++|+|+|+|+.. .+.+.+++++++++. ++ +.+.|.++.+++..+|+.||++|+||.
T Consensus 203 i~a~~~l~~~~~~~~l~ivG~g~~~~~~~l~~~~~~~~~~~~l~~~v~~l~~vv~~~g~~~~~~~~~~~~~adv~v~pS~ 282 (413)
T 3oy2_A 203 VLAAARFISKYPDAKVRFLCNSHHESKFDLHSIALRELVASGVDNVFTHLNKIMINRTVLTDERVDMMYNACDVIVNCSS 282 (413)
T ss_dssp HHHHHHHHHHCTTCCEEEEEECCTTCSCCHHHHHHHHHHHHTCSCHHHHHTTEEEECSCCCHHHHHHHHHHCSEEEECCS
T ss_pred HHHHHHHHHhCCCcEEEEEeCCcccchhhHHHHHHHHHHHcCcccccccccceeeccCcCCHHHHHHHHHhCCEEEeCCC
Confidence 999999875 37999999987531 245788888888754 44 676677888999999999999999999
Q ss_pred CCCCchHHHHHhhcCCceEEEecCCCccccccccccc----------ccceeee--eecCCCHHHHHHHHHHHhcCHHHH
Q 011163 393 HDPLLQVPLKALKYGAAPIAVTSSDIEFRHFAEFDHE----------STRFSRF--ISSTFGNISLSQALEEIKNNPLSW 460 (492)
Q Consensus 393 ~E~~glv~lEAma~G~PvV~~~~~~gg~~e~v~~~~~----------~~g~~G~--~~~~~~~~~l~~ai~~~~~~~~~~ 460 (492)
+|+||++++|||+||+|||+|+. ||+.|++.++.. .++.+|+ ++++.|+++|+++| .+++|++.+
T Consensus 283 ~E~~~~~~lEAma~G~PvI~s~~--~g~~e~v~~~~~~~i~~~~~~~~~~~~G~~gl~~~~d~~~la~~i-~l~~~~~~~ 359 (413)
T 3oy2_A 283 GEGFGLCSAEGAVLGKPLIISAV--GGADDYFSGDCVYKIKPSAWISVDDRDGIGGIEGIIDVDDLVEAF-TFFKDEKNR 359 (413)
T ss_dssp CCSSCHHHHHHHTTTCCEEEECC--HHHHHHSCTTTSEEECCCEEEECTTTCSSCCEEEECCHHHHHHHH-HHTTSHHHH
T ss_pred cCCCCcHHHHHHHcCCCEEEcCC--CChHHHHccCcccccccccccccccccCcceeeCCCCHHHHHHHH-HHhcCHHHH
Confidence 99999999999999999999999 999999874321 1222388 99999999999999 999999999
Q ss_pred HHHHHHHHh---ccCCchhhHHHHHHHHHHHHh
Q 011163 461 KRKIKDAML---QDFSWDADCNDIHISAYTAIK 490 (492)
Q Consensus 461 ~~~~~~a~~---~~fsw~~~a~~~~~~~Y~~l~ 490 (492)
++++++++. ++|||+.+++++ +++|+++.
T Consensus 360 ~~~~~~a~~~~~~~fs~~~~~~~~-~~~~~~~~ 391 (413)
T 3oy2_A 360 KEYGKRVQDFVKTKPTWDDISSDI-IDFFNSLL 391 (413)
T ss_dssp HHHHHHHHHHHTTSCCHHHHHHHH-HHHHHHHT
T ss_pred HHHHHHHHHHHHHhCCHHHHHHHH-HHHHHHHH
Confidence 999999876 689999999994 99999874
No 13
>2iuy_A Avigt4, glycosyltransferase; antibiotics, family GT-4, avilamycin A; HET: MES; 2.1A {Streptomyces viridochromogenes} PDB: 2iv3_A*
Probab=100.00 E-value=1.3e-40 Score=328.11 Aligned_cols=311 Identities=13% Similarity=0.082 Sum_probs=239.5
Q ss_pred CceEEEEeec--------c---ccccccCcHHHHHhHHHHHHHHCCCeEEEEeecCCCCCcccccccceeeeeeeeecCC
Q 011163 8 GFHIIHICTE--------M---DPLVSIGSLASYVTGLSGALQRKGHLVEVILPKYACMNLDGVQGLREIKAECYSYFNG 76 (492)
Q Consensus 8 ~mkIl~v~~~--------~---~p~~~~GG~~~~~~~l~~~L~~~Gh~V~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 76 (492)
+|||++++.. + +|. ..||+++++.+|+++|.++||+|+++++.......
T Consensus 3 ~mkIl~v~~~~~~~~~~~~~p~~p~-~~gG~~~~~~~l~~~L~~~G~~v~v~~~~~~~~~~------------------- 62 (342)
T 2iuy_A 3 PLKVALVNIPLRVPGSDAWISVPPQ-GYGGIQWVVANLMDGLLELGHEVFLLGAPGSPAGR------------------- 62 (342)
T ss_dssp CCEEEEECCCCBCTTSSSBCCSSCS-SSCHHHHHHHHHHHHHHHTTCEEEEESCTTSCCCS-------------------
T ss_pred ccEEEEEeccccccCcccccccCcc-cCChHHHHHHHHHHHHHHcCCeEEEEecCCCCCCC-------------------
Confidence 5999999998 4 332 45999999999999999999999999986432110
Q ss_pred eeeEEEEEEEEECCeEEEEEccCCCCCCccCCCCCCCCChhHHHHHHHHHHHHHHHHcCCCCCEEEEcCchhhhHHHHHH
Q 011163 77 QLHANKIWIGVVSGIGVTFIQPLHYSSFFNRESVYGYSDDFERFTYFSRASLDYIVKSRKQPDVLHIHNWETAIVGPLFW 156 (492)
Q Consensus 77 ~~~~~~~~~~~~~gv~v~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pDiVh~h~~~~~~~~~~~~ 156 (492)
++++++.. ..+ ..+.+++++ .+|||||+|.+...+.. .
T Consensus 63 ------------~~~~~~~~------------~~~-------------~~l~~~l~~--~~~Dvi~~~~~~~~~~~---~ 100 (342)
T 2iuy_A 63 ------------PGLTVVPA------------GEP-------------EEIERWLRT--ADVDVVHDHSGGVIGPA---G 100 (342)
T ss_dssp ------------TTEEECSC------------CSH-------------HHHHHHHHH--CCCSEEEECSSSSSCST---T
T ss_pred ------------CcceeccC------------CcH-------------HHHHHHHHh--cCCCEEEECCchhhHHH---H
Confidence 12322110 000 133344444 58999999986544331 1
Q ss_pred HHHhhcCCCCCcEEEEecCCCCCCCCCchhhhhcCCCccccCCCCcccCCCCCccchhhHHHHhhcCceeccCccchhhh
Q 011163 157 DIFVKQGLEGTRILLSCHNLNSLCLEHPDKLALCGLDPARLHRPDRLQDNTKTHLVNILKGGVVYSNKVVIVSSMHSKGR 236 (492)
Q Consensus 157 ~~~~~~~~~~~~~v~t~H~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ad~vi~vS~~~~~~~ 236 (492)
+..++| |+++|+.... . ..+|.++++|+..++.+
T Consensus 101 ------~~~~~p-v~~~h~~~~~--------------------------~-------------~~~d~ii~~S~~~~~~~ 134 (342)
T 2iuy_A 101 ------LPPGTA-FISSHHFTTR--------------------------P-------------VNPVGCTYSSRAQRAHC 134 (342)
T ss_dssp ------CCTTCE-EEEEECSSSB--------------------------C-------------SCCTTEEESCHHHHHHT
T ss_pred ------hhcCCC-EEEecCCCCC--------------------------c-------------ccceEEEEcCHHHHHHH
Confidence 136889 9999975310 0 01799999999887755
Q ss_pred hhcccCCCccHHHhhhcCCeeeecCCCCCCCcCCCCCcccccccCccCccChHHHHHHHHHHhCCCCCCCceEEEEEecc
Q 011163 237 IIRSLSHGLESTLAIHQDKLLVAPCGFDSSTWDPSNDKFLTENYCAEDMKGKTVCKVTLQQQLGLSKDASTIVVGCIFSD 316 (492)
Q Consensus 237 ~~~~~~~~l~~~~~~~~~~~~vI~nGvd~~~f~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~lg~~~~~~~~~i~~~grl 316 (492)
.. ..++.+||||+|.+.|.+... ..+ +.+.++++||+
T Consensus 135 ~~--------------~~~~~vi~ngvd~~~~~~~~~--------------------------~~~---~~~~i~~vG~~ 171 (342)
T 2iuy_A 135 GG--------------GDDAPVIPIPVDPARYRSAAD--------------------------QVA---KEDFLLFMGRV 171 (342)
T ss_dssp TC--------------CTTSCBCCCCBCGGGSCCSTT--------------------------CCC---CCSCEEEESCC
T ss_pred hc--------------CCceEEEcCCCChhhcCcccc--------------------------cCC---CCCEEEEEecc
Confidence 42 368899999999887766521 011 23578999999
Q ss_pred ccccCHHHHHHHHHHHhHcCcEEEEEecCCChhHHHHHHHHHHHhCCCeEEEEeccCHHHHHHHHhcCCEEEECCC----
Q 011163 317 VSDVFLENLKAVVRGAKMRGIQFVFTGTNKLPSASRALVSFQEELKDGIVIFVDSYDDALLHLIFSGSDIILCHSF---- 392 (492)
Q Consensus 317 ~~~Kg~~~li~a~~~l~~~~~~lvivG~g~~~~~~~~l~~~~~~~~~~~v~~~~~~~~~~~~~~~~~adi~v~pS~---- 392 (492)
.+.||++.+++|++.+ +++|+|+|+|+ ..+.+++++++++ ++|.|+|..+.+++..+|+.||++|+||.
T Consensus 172 ~~~Kg~~~li~a~~~~---~~~l~i~G~g~---~~~~l~~~~~~~~-~~v~~~g~~~~~~l~~~~~~adv~v~ps~~~~~ 244 (342)
T 2iuy_A 172 SPHKGALEAAAFAHAC---GRRLVLAGPAW---EPEYFDEITRRYG-STVEPIGEVGGERRLDLLASAHAVLAMSQAVTG 244 (342)
T ss_dssp CGGGTHHHHHHHHHHH---TCCEEEESCCC---CHHHHHHHHHHHT-TTEEECCCCCHHHHHHHHHHCSEEEECCCCCCC
T ss_pred ccccCHHHHHHHHHhc---CcEEEEEeCcc---cHHHHHHHHHHhC-CCEEEeccCCHHHHHHHHHhCCEEEECCccccc
Confidence 9999999999999987 79999999774 3567778888875 89999999999888999999999999999
Q ss_pred ------CCCCchHHHHHhhcCCceEEEecCCCccccccccccccc--ceeeeeecCCCHHHHHHHHHHHhcCHHHHHHHH
Q 011163 393 ------HDPLLQVPLKALKYGAAPIAVTSSDIEFRHFAEFDHEST--RFSRFISSTFGNISLSQALEEIKNNPLSWKRKI 464 (492)
Q Consensus 393 ------~E~~glv~lEAma~G~PvV~~~~~~gg~~e~v~~~~~~~--g~~G~~~~~~~~~~l~~ai~~~~~~~~~~~~~~ 464 (492)
.|+||++++|||+||+|+|+++. ||+.|+++ + +.+|+++++ |+++++++|..+++ .+.+
T Consensus 245 ~~~~~~~E~~~~~~~EAma~G~PvI~s~~--~~~~e~~~-----~~~~~~g~~~~~-d~~~l~~~i~~l~~-----~~~~ 311 (342)
T 2iuy_A 245 PWGGIWCEPGATVVSEAAVSGTPVVGTGN--GCLAEIVP-----SVGEVVGYGTDF-APDEARRTLAGLPA-----SDEV 311 (342)
T ss_dssp TTCSCCCCCCCHHHHHHHHTTCCEEECCT--TTHHHHGG-----GGEEECCSSSCC-CHHHHHHHHHTSCC-----HHHH
T ss_pred ccccccccCccHHHHHHHhcCCCEEEcCC--CChHHHhc-----ccCCCceEEcCC-CHHHHHHHHHHHHH-----HHHH
Confidence 89999999999999999999999 99999987 4 567999999 99999999999987 1112
Q ss_pred HHHHhccCCchhhHHHHHHHHHHHHh
Q 011163 465 KDAMLQDFSWDADCNDIHISAYTAIK 490 (492)
Q Consensus 465 ~~a~~~~fsw~~~a~~~~~~~Y~~l~ 490 (492)
++...++|||+.+++++ .++|+++.
T Consensus 312 ~~~~~~~~s~~~~~~~~-~~~~~~~~ 336 (342)
T 2iuy_A 312 RRAAVRLWGHVTIAERY-VEQYRRLL 336 (342)
T ss_dssp HHHHHHHHBHHHHHHHH-HHHHHHHH
T ss_pred HHHHHHhcCHHHHHHHH-HHHHHHHH
Confidence 22223789999999995 99999874
No 14
>2gek_A Phosphatidylinositol mannosyltransferase (PIMA); GT4 glycosyltransferase, rossmann fold, complex; HET: GDP; 2.40A {Mycobacterium smegmatis} PDB: 2gej_A*
Probab=100.00 E-value=1.6e-40 Score=334.84 Aligned_cols=360 Identities=18% Similarity=0.173 Sum_probs=259.5
Q ss_pred CCceEEEEeeccccccccCcHHHHHhHHHHHHHHCCCeEEEEeecCCCCCcccccccceeeeeeeeecCCeeeEEEEEEE
Q 011163 7 NGFHIIHICTEMDPLVSIGSLASYVTGLSGALQRKGHLVEVILPKYACMNLDGVQGLREIKAECYSYFNGQLHANKIWIG 86 (492)
Q Consensus 7 ~~mkIl~v~~~~~p~~~~GG~~~~~~~l~~~L~~~Gh~V~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 86 (492)
++|||+++++.++| ..||.+.++.+++++|.++||+|+++++........ ...
T Consensus 19 ~~MkIl~i~~~~~~--~~gG~~~~~~~l~~~L~~~G~~V~v~~~~~~~~~~~---~~~---------------------- 71 (406)
T 2gek_A 19 SHMRIGMVCPYSFD--VPGGVQSHVLQLAEVLRDAGHEVSVLAPASPHVKLP---DYV---------------------- 71 (406)
T ss_dssp --CEEEEECSSCTT--SCCHHHHHHHHHHHHHHHTTCEEEEEESCCTTSCCC---TTE----------------------
T ss_pred CcceEEEEeccCCC--CCCcHHHHHHHHHHHHHHCCCeEEEEecCCccccCC---ccc----------------------
Confidence 45999999975544 359999999999999999999999999865432100 000
Q ss_pred EECCeEEEEEccCCCCCCccCCCCCCCCChhHHHHHHHHHHHHHHHHcCCCCCEEEEcCchhhhHHHHHHHHHhhcCCCC
Q 011163 87 VVSGIGVTFIQPLHYSSFFNRESVYGYSDDFERFTYFSRASLDYIVKSRKQPDVLHIHNWETAIVGPLFWDIFVKQGLEG 166 (492)
Q Consensus 87 ~~~gv~v~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pDiVh~h~~~~~~~~~~~~~~~~~~~~~~ 166 (492)
...+ +++.++. ........+. ..+...+.+++++ .+|||||+|.+.....+.++++. .+
T Consensus 72 ~~~~-~~~~~~~------~~~~~~~~~~------~~~~~~l~~~l~~--~~~Dii~~~~~~~~~~~~~~~~~------~~ 130 (406)
T 2gek_A 72 VSGG-KAVPIPY------NGSVARLRFG------PATHRKVKKWIAE--GDFDVLHIHEPNAPSLSMLALQA------AE 130 (406)
T ss_dssp EECC-CCC------------------CC------HHHHHHHHHHHHH--HCCSEEEEECCCSSSHHHHHHHH------EE
T ss_pred ccCC-cEEeccc------cCCccccccc------HHHHHHHHHHHHh--cCCCEEEECCccchHHHHHHHHh------cC
Confidence 0112 2222210 0000001010 0112344444543 58999999986544443333332 47
Q ss_pred CcEEEEecCCCCCCCCCchhhhhcCCCccccCCCCcccCCCCCccchhhHHHHhhcCceeccCccchhhhhhcccCCCcc
Q 011163 167 TRILLSCHNLNSLCLEHPDKLALCGLDPARLHRPDRLQDNTKTHLVNILKGGVVYSNKVVIVSSMHSKGRIIRSLSHGLE 246 (492)
Q Consensus 167 ~~~v~t~H~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ad~vi~vS~~~~~~~~~~~~~~~l~ 246 (492)
+|+|+++|+.... .... .. ...+++..++.+|.++++|+..++.+.. .+
T Consensus 131 ~~~i~~~h~~~~~-----~~~~---------------~~-----~~~~~~~~~~~~d~ii~~s~~~~~~~~~-~~----- 179 (406)
T 2gek_A 131 GPIVATFHTSTTK-----SLTL---------------SV-----FQGILRPYHEKIIGRIAVSDLARRWQME-AL----- 179 (406)
T ss_dssp SSEEEEECCCCCS-----HHHH---------------HH-----HHSTTHHHHTTCSEEEESSHHHHHHHHH-HH-----
T ss_pred CCEEEEEcCcchh-----hhhH---------------HH-----HHHHHHHHHhhCCEEEECCHHHHHHHHH-hc-----
Confidence 8999999984321 1000 00 0122336678999999999988776654 22
Q ss_pred HHHhhhcCCeeeecCCCCCCCcCCCCCcccccccCccCccChHHHHHHHHHHhCCCCCCCceEEEEEecc-ccccCHHHH
Q 011163 247 STLAIHQDKLLVAPCGFDSSTWDPSNDKFLTENYCAEDMKGKTVCKVTLQQQLGLSKDASTIVVGCIFSD-VSDVFLENL 325 (492)
Q Consensus 247 ~~~~~~~~~~~vI~nGvd~~~f~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~lg~~~~~~~~~i~~~grl-~~~Kg~~~l 325 (492)
+..++ +||||+|.+.|.+.... .+++. +.+.++++||+ .+.||++.+
T Consensus 180 -----~~~~~-vi~~~v~~~~~~~~~~~------------------------~~~~~--~~~~i~~~G~~~~~~Kg~~~l 227 (406)
T 2gek_A 180 -----GSDAV-EIPNGVDVASFADAPLL------------------------DGYPR--EGRTVLFLGRYDEPRKGMAVL 227 (406)
T ss_dssp -----SSCEE-ECCCCBCHHHHHTCCCC------------------------TTCSC--SSCEEEEESCTTSGGGCHHHH
T ss_pred -----CCCcE-EecCCCChhhcCCCchh------------------------hhccC--CCeEEEEEeeeCccccCHHHH
Confidence 24578 99999997666543200 01111 23689999999 999999999
Q ss_pred HHHHHHHhH--cCcEEEEEecCCChhHHHHHHHHHHHhCCCeEEEEeccCHHHHHHHHhcCCEEEECCC-CCCCchHHHH
Q 011163 326 KAVVRGAKM--RGIQFVFTGTNKLPSASRALVSFQEELKDGIVIFVDSYDDALLHLIFSGSDIILCHSF-HDPLLQVPLK 402 (492)
Q Consensus 326 i~a~~~l~~--~~~~lvivG~g~~~~~~~~l~~~~~~~~~~~v~~~~~~~~~~~~~~~~~adi~v~pS~-~E~~glv~lE 402 (492)
++|++++.+ .+++|+|+|.|+ . +.++++++++ .++|.+.|..+.+++..+|+.||++|+||. .|+||++++|
T Consensus 228 i~a~~~l~~~~~~~~l~i~G~~~---~-~~l~~~~~~~-~~~v~~~g~~~~~~~~~~~~~adv~v~ps~~~e~~~~~~~E 302 (406)
T 2gek_A 228 LAALPKLVARFPDVEILIVGRGD---E-DELREQAGDL-AGHLRFLGQVDDATKASAMRSADVYCAPHLGGESFGIVLVE 302 (406)
T ss_dssp HHHHHHHHTTSTTCEEEEESCSC---H-HHHHHHTGGG-GGGEEECCSCCHHHHHHHHHHSSEEEECCCSCCSSCHHHHH
T ss_pred HHHHHHHHHHCCCeEEEEEcCCc---H-HHHHHHHHhc-cCcEEEEecCCHHHHHHHHHHCCEEEecCCCCCCCchHHHH
Confidence 999999975 379999999763 2 6677777766 479999998898888999999999999996 9999999999
Q ss_pred HhhcCCceEEEecCCCcccccccccccccceeeeeecCCCHHHHHHHHHHHhcCHHHHHHHHHHHHh--ccCCchhhHHH
Q 011163 403 ALKYGAAPIAVTSSDIEFRHFAEFDHESTRFSRFISSTFGNISLSQALEEIKNNPLSWKRKIKDAML--QDFSWDADCND 480 (492)
Q Consensus 403 Ama~G~PvV~~~~~~gg~~e~v~~~~~~~g~~G~~~~~~~~~~l~~ai~~~~~~~~~~~~~~~~a~~--~~fsw~~~a~~ 480 (492)
||+||+|+|+++. ||+.|++. ++.+|+++++.|+++++++|..+++|++.+.+++++++. ++|+|+.++++
T Consensus 303 a~a~G~PvI~~~~--~~~~e~i~-----~~~~g~~~~~~d~~~l~~~i~~l~~~~~~~~~~~~~~~~~~~~~s~~~~~~~ 375 (406)
T 2gek_A 303 AMAAGTAVVASDL--DAFRRVLA-----DGDAGRLVPVDDADGMAAALIGILEDDQLRAGYVARASERVHRYDWSVVSAQ 375 (406)
T ss_dssp HHHHTCEEEECCC--HHHHHHHT-----TTTSSEECCTTCHHHHHHHHHHHHHCHHHHHHHHHHHHHHGGGGBHHHHHHH
T ss_pred HHHcCCCEEEecC--CcHHHHhc-----CCCceEEeCCCCHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHhCCHHHHHHH
Confidence 9999999999999 99999987 356799999999999999999999999999999988875 68999999999
Q ss_pred HHHHHHHHHh
Q 011163 481 IHISAYTAIK 490 (492)
Q Consensus 481 ~~~~~Y~~l~ 490 (492)
+ .++|+++.
T Consensus 376 ~-~~~~~~~~ 384 (406)
T 2gek_A 376 I-MRVYETVS 384 (406)
T ss_dssp H-HHHHHHHC
T ss_pred H-HHHHHHHH
Confidence 5 99999874
No 15
>3nb0_A Glycogen [starch] synthase isoform 2; glycogen synthase, glucose-6-phosphate, yeast, allosteric AC transferase; HET: G6P; 2.41A {Saccharomyces cerevisiae} PDB: 3rt1_A* 3nch_A 3naz_A 3o3c_A* 3rsz_A*
Probab=100.00 E-value=3.3e-41 Score=344.27 Aligned_cols=430 Identities=13% Similarity=0.058 Sum_probs=274.6
Q ss_pred ccCcHHHHHhHHHHHHHH-CCCeEEEEeecCCCCCcccccccc----ee-------eeeeeeecCCeeeEEEEEEEEECC
Q 011163 23 SIGSLASYVTGLSGALQR-KGHLVEVILPKYACMNLDGVQGLR----EI-------KAECYSYFNGQLHANKIWIGVVSG 90 (492)
Q Consensus 23 ~~GG~~~~~~~l~~~L~~-~Gh~V~vi~~~~~~~~~~~~~~~~----~~-------~~~~~~~~~~~~~~~~~~~~~~~g 90 (492)
++||+-+++..-|..+.+ .|-+..+|.|........+...+. .+ ...+.-....+...+.+-++.++|
T Consensus 40 kVGGIyTVl~tka~~~~~~~gd~y~~iGP~~~~~~~~e~e~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~v~~GrW~i~G 119 (725)
T 3nb0_A 40 RVGGIYSVLKSKAPITVAQYKDHYHLIGPLNKATYQNEVDILDWKKPEAFSDEMRPVQHALQTMESRGVHFVYGRWLIEG 119 (725)
T ss_dssp CSSHHHHHHHHHHHHHHHHHGGGEEEEEECCTTTHHHHEEECCSSSGGGSCSTTHHHHHHHHHHHTTTCCEEEEEESSTT
T ss_pred ccCCeEEEEecchhHHHHHhCCeEEEECCCCCCcCCcceeecCCCCchhhcchhHHHHHHHHHHHHCCCeEEEEEEecCC
Confidence 789999999999999987 599999999964322111100000 00 000000011122334455556778
Q ss_pred eEEEEEccCCCCCCccC--------------CCC--CCCCChhHHHHHHHHHHHHHHHHcC-CCCCEEEEcCchhhhHHH
Q 011163 91 IGVTFIQPLHYSSFFNR--------------ESV--YGYSDDFERFTYFSRASLDYIVKSR-KQPDVLHIHNWETAIVGP 153 (492)
Q Consensus 91 v~v~~i~~~~~~~~~~~--------------~~~--~~~~~~~~~~~~~~~~~~~~~~~~~-~~pDiVh~h~~~~~~~~~ 153 (492)
.+.+.+=.. ..++.. ..+ |++.++..+|.+++.++++.+..+. .+|||+|+|+|++++++.
T Consensus 120 ~P~viL~d~--~~~~~~~~~~~~~lw~~~~i~s~~~yg~~dd~~~F~y~~~avl~~l~~~~~~~pdIiH~HDW~tg~~~~ 197 (725)
T 3nb0_A 120 APKVILFDL--DSVRGYSNEWKGDLWSLVGIPSPENDFETNDAILLGYTVAWFLGEVAHLDSQHAIVAHFHEWLAGVALP 197 (725)
T ss_dssp CCEEEEECS--GGGGGGHHHHHHHHHHHHCCCCCSSCHHHHHHHHHHHHHHHHHHHHHHHCCSEEEEEEEESGGGCTHHH
T ss_pred CceEEEEeC--hHHHHHHHHHHHHHHHHhCcCCCCcccchhHHHHHHHHHHHHHHHHHhcCCCCCcEEEeCchhhhHHHH
Confidence 886554211 112211 112 2233578899999999999887654 679999999999999988
Q ss_pred HHHHHHhhcCCCCCcEEEEecCCC---C---CCCCC-chhhhhcCCCccccCCCCcccCCCCCccchhhHHHHhhcCcee
Q 011163 154 LFWDIFVKQGLEGTRILLSCHNLN---S---LCLEH-PDKLALCGLDPARLHRPDRLQDNTKTHLVNILKGGVVYSNKVV 226 (492)
Q Consensus 154 ~~~~~~~~~~~~~~~~v~t~H~~~---~---~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ad~vi 226 (492)
+++.. ..++|+|+|+|++. + +|.++ ...+...+.+.... ..+.+ ...++++.++.+||.|+
T Consensus 198 ~Lk~~-----~~~i~tVfTiH~telGR~lagqg~~~~y~~L~~~~~d~ea~----~~~i~---~~~~~EKaga~~AD~IT 265 (725)
T 3nb0_A 198 LCRKR-----RIDVVTIFTTHATLLGRYLCASGSFDFYNCLESVDVDHEAG----RFGIY---HRYCIERAAAHSADVFT 265 (725)
T ss_dssp HHHHT-----TCSCEEEEEESSCHHHHHHTSSSCSCHHHHGGGCCHHHHHH----HTTCH---HHHHHHHHHHHHSSEEE
T ss_pred HHHHh-----CCCCCEEEEEecchhhhhhhhcCCCchhhhhhhcCCChhhh----hhchh---HHHHHHHHHHHhCCEEE
Confidence 88643 26899999999874 1 23322 11122222111100 01111 23578999999999999
Q ss_pred ccCccchhhhhhcccCCCccHHHhhhcCCeeeecCCCCCCCcCCCCCcccccccCccCccChHHHHHHHHHHh------C
Q 011163 227 IVSSMHSKGRIIRSLSHGLESTLAIHQDKLLVAPCGFDSSTWDPSNDKFLTENYCAEDMKGKTVCKVTLQQQL------G 300 (492)
Q Consensus 227 ~vS~~~~~~~~~~~~~~~l~~~~~~~~~~~~vI~nGvd~~~f~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~l------g 300 (492)
|||+.+++++.. .++ .+++ .+||||||.+.|+|... + ...+..+|..+++.+ |
T Consensus 266 TVS~~yA~Ei~~-Ll~--------r~~d--~iIpNGID~~~f~p~~~-~---------~~~k~~aK~klq~~l~~~~~~~ 324 (725)
T 3nb0_A 266 TVSQITAFEAEH-LLK--------RKPD--GILPNGLNVIKFQAFHE-F---------QNLHALKKEKINDFVRGHFHGC 324 (725)
T ss_dssp ESSHHHHHHHHH-HTS--------SCCS--EECCCCBCCCCCSSTTH-H---------HHHHHHHHHHHHHHHHHHTTTC
T ss_pred ECCHHHHHHHHH-Hhc--------CCCC--EEEcCCccccccCcchh-h---------HHHHHHHHHHHHHHHHhhcccC
Confidence 999999998874 222 1233 33999999999988521 0 112344555555543 3
Q ss_pred CCCC-CCceEEEEEeccc-cccCHHHHHHHHHHHhHc---------CcEEEEEecCCCh---------------------
Q 011163 301 LSKD-ASTIVVGCIFSDV-SDVFLENLKAVVRGAKMR---------GIQFVFTGTNKLP--------------------- 348 (492)
Q Consensus 301 ~~~~-~~~~~i~~~grl~-~~Kg~~~li~a~~~l~~~---------~~~lvivG~g~~~--------------------- 348 (492)
++-+ ++.++++.+||++ ++||++++++|+.++... -+.|+|+..+...
T Consensus 325 l~l~~dk~liifivgRle~~nKGiDl~ieAl~~L~~~l~~~~~~~~vvafii~p~~~~~~~~~~l~~~~~~~~l~~~~~~ 404 (725)
T 3nb0_A 325 FDFDLDNTLYFFIAGRYEYKNKGADMFIEALARLNYRLKVSGSKKTVVAFIVMPAKNNSFTVEALKGQAEVRALENTVHE 404 (725)
T ss_dssp CCSCGGGEEEEEEESSCCTTTTTHHHHHHHHHHHHHHHHHTTCCCEEEEEEECCCCEEEECHHHHHHHHHHHHHHHHHHH
T ss_pred CCCCCCceeEEEEEEEeccccCCHHHHHHHHHHHHHHHhhccCCCcEEEEEEeCCCCCCCchhhhcchhHHHHHHHHHHH
Confidence 3322 3456777789999 789999999999988731 2567777643111
Q ss_pred ---------------------------hHHH--------------------------------------HHHHHHHHhCC
Q 011163 349 ---------------------------SASR--------------------------------------ALVSFQEELKD 363 (492)
Q Consensus 349 ---------------------------~~~~--------------------------------------~l~~~~~~~~~ 363 (492)
+.++ .+....++++.
T Consensus 405 ~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~l~~~~~~~lkr~~~~~~~~~~~lpp~~TH~~~~~~~D~Il~~~r~l~L 484 (725)
T 3nb0_A 405 VTTSIGKRIFDHAIRYPHNGLTTELPTDLGELLKSSDKVMLKRRILALRRPEGQLPPIVTHNMVDDANDLILNKIRQVQL 484 (725)
T ss_dssp HHHHHHHHHHHHHHHTTSTTCCSSSCCCHHHHCCHHHHHHHHHHHHHHCCCTTCCCCSBSEEETTGGGCHHHHHHHHHTC
T ss_pred HHHHHhHHHHHHHhcccccccCCCCCCCHHHhcChHHHHHHHHHHHhhccCCCCCCCeeeeecccCCccHHHHHHHhcCC
Confidence 0000 11111122321
Q ss_pred -----Ce--EEEEeccC-HH------HHHHHHhcCCEEEECCCCCCCchHHHHHhhcCCceEEEecCCCccccccccccc
Q 011163 364 -----GI--VIFVDSYD-DA------LLHLIFSGSDIILCHSFHDPLLQVPLKALKYGAAPIAVTSSDIEFRHFAEFDHE 429 (492)
Q Consensus 364 -----~~--v~~~~~~~-~~------~~~~~~~~adi~v~pS~~E~~glv~lEAma~G~PvV~~~~~~gg~~e~v~~~~~ 429 (492)
++ |.|++.+- .. ++..+|++||+||+||.+||||++++||||||+|+|+|++ ||+.|+|.+...
T Consensus 485 ~N~~~drVKVIf~P~~L~~~d~lf~~d~~~~~~~advfV~PS~~EgfGl~~LEAmA~G~PvI~s~~--gG~~d~V~dg~~ 562 (725)
T 3nb0_A 485 FNSPSDRVKMIFHPEFLNANNPILGLDYDEFVRGCHLGVFPSYYEPWGYTPAECTVMGVPSITTNV--SGFGSYMEDLIE 562 (725)
T ss_dssp CCCTTCSEEEEECCSCCCTTCSSSCCCHHHHHHHCSEEECCCSSBSSCHHHHHHHHTTCCEEEETT--BHHHHHHHTTSC
T ss_pred CCCcCCceeEEEeccccCCCCccchhHHHHHHhhceEEEeccccCCCCHHHHHHHHcCCCEEEeCC--CChhhhhhcccc
Confidence 22 45665553 22 4678999999999999999999999999999999999999 999999874321
Q ss_pred --ccceeeeeec---CCCHHH----HHHHHHHHhc-CHHHHHHHHHHHHh--ccCCchhhHHHHHHHHHHHHh
Q 011163 430 --STRFSRFISS---TFGNIS----LSQALEEIKN-NPLSWKRKIKDAML--QDFSWDADCNDIHISAYTAIK 490 (492)
Q Consensus 430 --~~g~~G~~~~---~~~~~~----l~~ai~~~~~-~~~~~~~~~~~a~~--~~fsw~~~a~~~~~~~Y~~l~ 490 (492)
..+.+|++|. +.|+++ |+++|..+.+ ++..+.+++++++. ++|||++++++ |+++|+.+.
T Consensus 563 ~~~~~~tG~lV~~rd~~d~ee~aeaLa~aL~~f~~~d~~~r~~mr~~ar~~A~~FSWe~iA~~-Yl~~Ye~aL 634 (725)
T 3nb0_A 563 TNQAKDYGIYIVDRRFKAPDESVEQLVDYMEEFVKKTRRQRINQRNATEALSDLLDWKRMGLE-YVKARQLAL 634 (725)
T ss_dssp HHHHHHTTEEEECCSSSCHHHHHHHHHHHHHHHHTCCHHHHHHHHHHHHHGGGGGBHHHHHHH-HHHHHHHHH
T ss_pred ccCCCCceEEEeCCCCCCHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHhCCHHHHHHH-HHHHHHHHH
Confidence 0124789884 345554 5555555543 67777888887754 78999999999 599999763
No 16
>2x0d_A WSAF; GT4 family, transferase; HET: MSE; 2.28A {Geobacillus stearothermophilus} PDB: 2x0f_A* 2x0e_A*
Probab=100.00 E-value=3.7e-37 Score=310.05 Aligned_cols=356 Identities=10% Similarity=0.054 Sum_probs=225.6
Q ss_pred cCCCceEEEEeeccccccccCcHHHHHhHHHHHHHHCCCeEEEEeecCCCCCcccccccceeeeeeeeecCCeeeEEEEE
Q 011163 5 LRNGFHIIHICTEMDPLVSIGSLASYVTGLSGALQRKGHLVEVILPKYACMNLDGVQGLREIKAECYSYFNGQLHANKIW 84 (492)
Q Consensus 5 ~~~~mkIl~v~~~~~p~~~~GG~~~~~~~l~~~L~~~Gh~V~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 84 (492)
+.++|||+++++.|.|....||.. .+.+|+++|+++||+|+|+++.... ... ....+
T Consensus 43 ~~~~mrI~~v~~~~~p~~~~GG~~-~v~~la~~L~~~GheV~Vvt~~~~~-~~~---~~~~~------------------ 99 (413)
T 2x0d_A 43 SIKGKRLNLLVPSINQEHMFGGIS-TALKLFEQFDNKKFKKRIILTDATP-NPK---DLQSF------------------ 99 (413)
T ss_dssp CCCSCEEEEEESCCCGGGCSHHHH-HHHHHHTTSCTTTCEEEEEESSCCC-CHH---HHGGG------------------
T ss_pred CCCCceEEEEeCCCCccccccHHH-HHHHHHHHHHHcCCceEEEEecCCC-ChH---HHHhh------------------
Confidence 456799999999998853457775 5899999999999999999986421 110 00000
Q ss_pred EEEECCeEEEEEccCCCCCCccCCCCCCCCChhHHHHHHHHHHHHHHHHcCCCCCEEEEcCchhhhHHHHHHHHHh-hcC
Q 011163 85 IGVVSGIGVTFIQPLHYSSFFNRESVYGYSDDFERFTYFSRASLDYIVKSRKQPDVLHIHNWETAIVGPLFWDIFV-KQG 163 (492)
Q Consensus 85 ~~~~~gv~v~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pDiVh~h~~~~~~~~~~~~~~~~-~~~ 163 (492)
.+.....+.. ...+..+ +..+.... .. .. ...++||||+|.|.++.....+.++.. ...
T Consensus 100 ----~~~~~~~~~~--~~~~~~~--i~~~~~~~-------~~----~~-~~~~~Dvv~a~~~~~~~~~~~~~~~~~~~~~ 159 (413)
T 2x0d_A 100 ----KSFKYVMPEE--DKDFALQ--IVPFNDRY-------NR----TI-PVAKHDIFIATAWWTAYAAQRIVSWQSDTYG 159 (413)
T ss_dssp ----TTSEECCTTC--CCCCSEE--EEECSCCT-------TC----CE-EECTTEEEEECSHHHHHHHHHHHHHHHHHHT
T ss_pred ----hccceeeccC--Cccccce--eeeccccc-------cc----cc-cCCCCCEEEEehHHHHHHHHHhhhhhhhhcc
Confidence 0100000000 0000000 00000000 00 00 014699999999876655433311100 011
Q ss_pred CCCCcEEEEecCCCCCCCCCchhhhhcCCCccccCCCCcccCCCCCccchhhHHHHhhcC--ceeccCccchhhhhhccc
Q 011163 164 LEGTRILLSCHNLNSLCLEHPDKLALCGLDPARLHRPDRLQDNTKTHLVNILKGGVVYSN--KVVIVSSMHSKGRIIRSL 241 (492)
Q Consensus 164 ~~~~~~v~t~H~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ad--~vi~vS~~~~~~~~~~~~ 241 (492)
....|.++.+|+.... ..+ ... .....+..+..++ .+|++|+..++.+...
T Consensus 160 ~~~~~~~~~v~~~~~~-~~~--------~~~----------------~~~~~~~~~~~~~~~~vi~~S~~~~~~l~~~-- 212 (413)
T 2x0d_A 160 IPPNKILYIIQDFEPG-FYQ--------WSS----------------QYVLAESTYKYRGPQIAVFNSELLKQYFNNK-- 212 (413)
T ss_dssp CCCCCEEEEECSCGGG-GSC--------SSH----------------HHHHHHHTTSCCSCEEEEEESHHHHHHHHHH--
T ss_pred cccCcEEEEEeechhh-cCc--------cCh----------------HHHHHHHHhccCCceEEEEcCHHHHHHHHHc--
Confidence 1356778777764210 000 000 0011223334444 4788999988877642
Q ss_pred CCCccHHHhhhcCCeeeecCCCCCCCcCCCCCcccccccCccCccChHHHHHHHHHHhCCCCCCCceEEEEEecc-cccc
Q 011163 242 SHGLESTLAIHQDKLLVAPCGFDSSTWDPSNDKFLTENYCAEDMKGKTVCKVTLQQQLGLSKDASTIVVGCIFSD-VSDV 320 (492)
Q Consensus 242 ~~~l~~~~~~~~~~~~vI~nGvd~~~f~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~lg~~~~~~~~~i~~~grl-~~~K 320 (492)
|. ...++.+++||+|.+.|.+.. .+. .+...++++||+ .+.|
T Consensus 213 g~--------~~~~~~~i~~g~d~~~~~~~~--------------------------~~~---~~~~~il~~gr~~~~~K 255 (413)
T 2x0d_A 213 GY--------NFTDEYFFQPKINTTLKNYIN--------------------------DKR---QKEKIILVYGRPSVKRN 255 (413)
T ss_dssp TC--------CCSEEEEECCCCCHHHHTTTT--------------------------SCC---CCCSEEEEEECTTCGGG
T ss_pred CC--------CCCceEEeCCCcCchhhcccc--------------------------ccc---CCCCEEEEEecCchhcc
Confidence 21 224688999999965443310 011 123567889996 6899
Q ss_pred CHHHHHHHHHHHhHc-----CcEEEEEecCCChhHHHHHHHHHHHhC-CCeEEEEeccCHHHHHHHHhcCCEEEECCCCC
Q 011163 321 FLENLKAVVRGAKMR-----GIQFVFTGTNKLPSASRALVSFQEELK-DGIVIFVDSYDDALLHLIFSGSDIILCHSFHD 394 (492)
Q Consensus 321 g~~~li~a~~~l~~~-----~~~lvivG~g~~~~~~~~l~~~~~~~~-~~~v~~~~~~~~~~~~~~~~~adi~v~pS~~E 394 (492)
|++.|++|++.+.+. +++|+|+|+|+.. .+++ .++|+|+|..+.+++..+|+.||+||+||.+|
T Consensus 256 g~~~li~A~~~l~~~~~~~~~~~l~ivG~~~~~----------~~l~~~~~v~f~G~~~~~~l~~~~~~adv~v~pS~~E 325 (413)
T 2x0d_A 256 AFTLIVEALKIFVQKYDRSNEWKIISVGEKHKD----------IALGKGIHLNSLGKLTLEDYADLLKRSSIGISLMISP 325 (413)
T ss_dssp CHHHHHHHHHHHHHHCTTGGGCEEEEEESCCCC----------EEEETTEEEEEEESCCHHHHHHHHHHCCEEECCCSSS
T ss_pred CHHHHHHHHHHHHHhCCCCCceEEEEEcCCchh----------hhcCCcCcEEEcCCCCHHHHHHHHHhCCEEEEecCCC
Confidence 999999999998752 3899999976431 1122 26899999999999999999999999999999
Q ss_pred CCchHHHHHhhcCCceEEEecCCCcccccccccccccceeeeeecCCCHHHHHHHHHHHhcCHHHHHHHHHHHHh--ccC
Q 011163 395 PLLQVPLKALKYGAAPIAVTSSDIEFRHFAEFDHESTRFSRFISSTFGNISLSQALEEIKNNPLSWKRKIKDAML--QDF 472 (492)
Q Consensus 395 ~~glv~lEAma~G~PvV~~~~~~gg~~e~v~~~~~~~g~~G~~~~~~~~~~l~~ai~~~~~~~~~~~~~~~~a~~--~~f 472 (492)
+||++++||||||+|||+ +. ||..|+|+ +|.+|++++++|+++|+++|..+++|++.+++ +++. ++|
T Consensus 326 ~~g~~~lEAmA~G~PVV~-~~--~g~~e~v~-----~~~~G~lv~~~d~~~la~ai~~ll~~~~~~~~---~~~~~~~~~ 394 (413)
T 2x0d_A 326 HPSYPPLEMAHFGLRVIT-NK--YENKDLSN-----WHSNIVSLEQLNPENIAETLVELCMSFNNRDV---DKKESSNMM 394 (413)
T ss_dssp SCCSHHHHHHHTTCEEEE-EC--BTTBCGGG-----TBTTEEEESSCSHHHHHHHHHHHHHHTC----------CCBSCG
T ss_pred CCCcHHHHHHhCCCcEEE-eC--CCcchhhh-----cCCCEEEeCCCCHHHHHHHHHHHHcCHHHHHH---hHHHHHHhC
Confidence 999999999999999999 55 67789887 35689999999999999999999999887776 3333 689
Q ss_pred CchhhHHHHHHHHHHHHh
Q 011163 473 SWDADCNDIHISAYTAIK 490 (492)
Q Consensus 473 sw~~~a~~~~~~~Y~~l~ 490 (492)
||+.+++++ ++|+++.
T Consensus 395 ~W~~~~~~~--~~~~~l~ 410 (413)
T 2x0d_A 395 FYINEFNEF--SFIKEIE 410 (413)
T ss_dssp GGCCCC-----TTHHHHH
T ss_pred CHHHHHHHH--HHHHHHH
Confidence 999999883 4777763
No 17
>1f0k_A MURG, UDP-N-acetylglucosamine-N-acetylmuramyl- (pentapeptide) pyrophosphoryl-undecaprenol...; rossmann fold, transferase; 1.90A {Escherichia coli} SCOP: c.87.1.2 PDB: 1nlm_A*
Probab=100.00 E-value=4.7e-34 Score=283.43 Aligned_cols=340 Identities=13% Similarity=0.016 Sum_probs=231.3
Q ss_pred CceEEEEeeccccccccCcHHHHHhHHHHHHHHCCCeEEEEeecCCCCCcccccccceeeeeeeeecCCeeeEEEEEEEE
Q 011163 8 GFHIIHICTEMDPLVSIGSLASYVTGLSGALQRKGHLVEVILPKYACMNLDGVQGLREIKAECYSYFNGQLHANKIWIGV 87 (492)
Q Consensus 8 ~mkIl~v~~~~~p~~~~GG~~~~~~~l~~~L~~~Gh~V~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 87 (492)
+|||++++. ..||....+..|+++|.++||+|+++++..... ... +.
T Consensus 6 ~mkIl~~~~------~~gG~~~~~~~la~~L~~~G~~V~v~~~~~~~~-~~~---~~----------------------- 52 (364)
T 1f0k_A 6 GKRLMVMAG------GTGGHVFPGLAVAHHLMAQGWQVRWLGTADRME-ADL---VP----------------------- 52 (364)
T ss_dssp -CEEEEECC------SSHHHHHHHHHHHHHHHTTTCEEEEEECTTSTH-HHH---GG-----------------------
T ss_pred CcEEEEEeC------CCccchhHHHHHHHHHHHcCCEEEEEecCCcch-hhh---cc-----------------------
Confidence 489999973 248999999999999999999999999764311 000 00
Q ss_pred ECCeEEEEEccCCCCCCccCCCCCCCCChhHHHHHHHHHHHHHHHHcCCCCCEEEEcCchhhhHHHHHHHHHhhcCCCCC
Q 011163 88 VSGIGVTFIQPLHYSSFFNRESVYGYSDDFERFTYFSRASLDYIVKSRKQPDVLHIHNWETAIVGPLFWDIFVKQGLEGT 167 (492)
Q Consensus 88 ~~gv~v~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pDiVh~h~~~~~~~~~~~~~~~~~~~~~~~ 167 (492)
-.|++++.++. ..+ ..............+......+.+.+++ .+||+||+|.....+.+.++++. .++
T Consensus 53 ~~g~~~~~~~~---~~~-~~~~~~~~~~~~~~~~~~~~~l~~~l~~--~~pDvv~~~~~~~~~~~~~~~~~------~~~ 120 (364)
T 1f0k_A 53 KHGIEIDFIRI---SGL-RGKGIKALIAAPLRIFNAWRQARAIMKA--YKPDVVLGMGGYVSGPGGLAAWS------LGI 120 (364)
T ss_dssp GGTCEEEECCC---CCC-TTCCHHHHHTCHHHHHHHHHHHHHHHHH--HCCSEEEECSSTTHHHHHHHHHH------TTC
T ss_pred ccCCceEEecC---Ccc-CcCccHHHHHHHHHHHHHHHHHHHHHHh--cCCCEEEEeCCcCchHHHHHHHH------cCC
Confidence 12566655531 101 0000000000111111222334444443 58999999975433332333222 689
Q ss_pred cEEEEecCCCCCCCCCchhhhhcCCCccccCCCCcccCCCCCccchhhHHHHhhcCceeccCccchhhhhhcccCCCccH
Q 011163 168 RILLSCHNLNSLCLEHPDKLALCGLDPARLHRPDRLQDNTKTHLVNILKGGVVYSNKVVIVSSMHSKGRIIRSLSHGLES 247 (492)
Q Consensus 168 ~~v~t~H~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ad~vi~vS~~~~~~~~~~~~~~~l~~ 247 (492)
|+|++.|+... . ...+...+.+|.++++|+.. +
T Consensus 121 p~v~~~~~~~~-----~----------------------------~~~~~~~~~~d~v~~~~~~~--------~------ 153 (364)
T 1f0k_A 121 PVVLHEQNGIA-----G----------------------------LTNKWLAKIATKVMQAFPGA--------F------ 153 (364)
T ss_dssp CEEEEECSSSC-----C----------------------------HHHHHHTTTCSEEEESSTTS--------S------
T ss_pred CEEEEecCCCC-----c----------------------------HHHHHHHHhCCEEEecChhh--------c------
Confidence 99999996421 0 01122335688888876532 1
Q ss_pred HHhhhcCCeeeecCCCCCCCcCCCCCcccccccCccCccChHHHHHHHHHHhCCCCCCCceEEEEEeccccccCHHHHHH
Q 011163 248 TLAIHQDKLLVAPCGFDSSTWDPSNDKFLTENYCAEDMKGKTVCKVTLQQQLGLSKDASTIVVGCIFSDVSDVFLENLKA 327 (492)
Q Consensus 248 ~~~~~~~~~~vI~nGvd~~~f~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~lg~~~~~~~~~i~~~grl~~~Kg~~~li~ 327 (492)
+ ++.+|+||+|.+.|.+.. .+++++++.+ ...++++.|++.++||.+.+++
T Consensus 154 ----~--~~~~i~n~v~~~~~~~~~----------------------~~~~~~~~~~-~~~il~~~g~~~~~k~~~~li~ 204 (364)
T 1f0k_A 154 ----P--NAEVVGNPVRTDVLALPL----------------------PQQRLAGREG-PVRVLVVGGSQGARILNQTMPQ 204 (364)
T ss_dssp ----S--SCEECCCCCCHHHHTSCC----------------------HHHHHTTCCS-SEEEEEECTTTCCHHHHHHHHH
T ss_pred ----C--CceEeCCccchhhcccch----------------------hhhhcccCCC-CcEEEEEcCchHhHHHHHHHHH
Confidence 1 567999999976554320 1345666543 2335556679999999999999
Q ss_pred HHHHHhHcCcE-EEEEecCCChhHHHHHHHHHHHhCCCeEEEEeccCHHHHHHHHhcCCEEEECCCCCCCchHHHHHhhc
Q 011163 328 VVRGAKMRGIQ-FVFTGTNKLPSASRALVSFQEELKDGIVIFVDSYDDALLHLIFSGSDIILCHSFHDPLLQVPLKALKY 406 (492)
Q Consensus 328 a~~~l~~~~~~-lvivG~g~~~~~~~~l~~~~~~~~~~~v~~~~~~~~~~~~~~~~~adi~v~pS~~E~~glv~lEAma~ 406 (492)
|++.+.+ +++ ++++|+|+ .+.+++++++++.++|.|+|.. +++..+|+.||++|+||. |++++|||+|
T Consensus 205 a~~~l~~-~~~~l~i~G~~~----~~~l~~~~~~~~~~~v~~~g~~--~~~~~~~~~ad~~v~~sg----~~~~~EAma~ 273 (364)
T 1f0k_A 205 VAAKLGD-SVTIWHQSGKGS----QQSVEQAYAEAGQPQHKVTEFI--DDMAAAYAWADVVVCRSG----ALTVSEIAAA 273 (364)
T ss_dssp HHHHHGG-GEEEEEECCTTC----HHHHHHHHHHTTCTTSEEESCC--SCHHHHHHHCSEEEECCC----HHHHHHHHHH
T ss_pred HHHHhcC-CcEEEEEcCCch----HHHHHHHHhhcCCCceEEecch--hhHHHHHHhCCEEEECCc----hHHHHHHHHh
Confidence 9999976 788 56678553 3567777777644689988766 445689999999999994 9999999999
Q ss_pred CCceEEEecCCCcccc--------cccccccccceeeeeecCCC--HHHHHHHHHHHhcCHHHHHHHHHHHHh--ccCCc
Q 011163 407 GAAPIAVTSSDIEFRH--------FAEFDHESTRFSRFISSTFG--NISLSQALEEIKNNPLSWKRKIKDAML--QDFSW 474 (492)
Q Consensus 407 G~PvV~~~~~~gg~~e--------~v~~~~~~~g~~G~~~~~~~--~~~l~~ai~~~~~~~~~~~~~~~~a~~--~~fsw 474 (492)
|+|+|+++. ||+.+ +++ .| .|++++++| +++|+++|..+ |++.++++++++++ +.|+|
T Consensus 274 G~Pvi~~~~--~g~~~~q~~~~~~~~~-----~g-~g~~~~~~d~~~~~la~~i~~l--~~~~~~~~~~~~~~~~~~~~~ 343 (364)
T 1f0k_A 274 GLPALFVPF--QHKDRQQYWNALPLEK-----AG-AAKIIEQPQLSVDAVANTLAGW--SRETLLTMAERARAASIPDAT 343 (364)
T ss_dssp TCCEEECCC--CCTTCHHHHHHHHHHH-----TT-SEEECCGGGCCHHHHHHHHHTC--CHHHHHHHHHHHHHTCCTTHH
T ss_pred CCCEEEeeC--CCCchhHHHHHHHHHh-----CC-cEEEeccccCCHHHHHHHHHhc--CHHHHHHHHHHHHHhhccCHH
Confidence 999999998 87643 443 23 489999988 99999999999 99999999999876 78999
Q ss_pred hhhHHHHHHHHHHHHh
Q 011163 475 DADCNDIHISAYTAIK 490 (492)
Q Consensus 475 ~~~a~~~~~~~Y~~l~ 490 (492)
+.+++++ +++|++..
T Consensus 344 ~~~~~~~-~~~y~~~~ 358 (364)
T 1f0k_A 344 ERVANEV-SRVARALE 358 (364)
T ss_dssp HHHHHHH-HHHHTTC-
T ss_pred HHHHHHH-HHHHHHHH
Confidence 9999995 99998753
No 18
>2hy7_A Glucuronosyltransferase GUMK; glycosyltransferases, xanthan, membrane-associated proteins; 1.90A {Xanthomonas campestris} PDB: 2q6v_A* 3cv3_A* 3cuy_A*
Probab=100.00 E-value=1.3e-34 Score=291.54 Aligned_cols=246 Identities=11% Similarity=0.057 Sum_probs=180.0
Q ss_pred CCCEEEEcCchhhhHHHHHHHHHhhcCCCCCcEEEEecCCCCCCCCCchhhhhcCCCccccCCCCcccCCCCCccchhhH
Q 011163 137 QPDVLHIHNWETAIVGPLFWDIFVKQGLEGTRILLSCHNLNSLCLEHPDKLALCGLDPARLHRPDRLQDNTKTHLVNILK 216 (492)
Q Consensus 137 ~pDiVh~h~~~~~~~~~~~~~~~~~~~~~~~~~v~t~H~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 216 (492)
++||||.+....+.+. .+.+. .++|+|+|+|+..... ...... ....+++
T Consensus 124 ~~DvIh~~~~~~~~~~-~~~~~------~~~p~v~~~h~~~~~~--------~~~~~~---------------~~~~~~~ 173 (406)
T 2hy7_A 124 ESDVIVFESGIAVAFI-ELAKR------VNPAAKLVYRASDGLS--------TINVAS---------------YIEREFD 173 (406)
T ss_dssp HCSEEEEESSGGGGGH-HHHHH------HCTTSEEEEEESSCHH--------HHTCCH---------------HHHHHHH
T ss_pred CCCEEEECCchHHHHH-HHHHH------hCCCEEEEEeccchhh--------cccccH---------------HHHHHHH
Confidence 6899996553333321 22222 5789999999753200 000000 0124567
Q ss_pred HHHhhcCceeccCccchhhhhhcccCCCccHHHhhhcCCeeeecCCCCCCCcCCCCCcccccccCccCccChHHHHHHHH
Q 011163 217 GGVVYSNKVVIVSSMHSKGRIIRSLSHGLESTLAIHQDKLLVAPCGFDSSTWDPSNDKFLTENYCAEDMKGKTVCKVTLQ 296 (492)
Q Consensus 217 ~~~~~ad~vi~vS~~~~~~~~~~~~~~~l~~~~~~~~~~~~vI~nGvd~~~f~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 296 (492)
..++.+|.|+++|+..++.+.. .. ++.+||||+|.+.|.|...
T Consensus 174 ~~~~~ad~vi~~S~~~~~~~~~-------------~~-~i~vipngvd~~~f~~~~~----------------------- 216 (406)
T 2hy7_A 174 RVAPTLDVIALVSPAMAAEVVS-------------RD-NVFHVGHGVDHNLDQLGDP----------------------- 216 (406)
T ss_dssp HHGGGCSEEEESCGGGGGGCSC-------------ST-TEEECCCCBCTTHHHHHCS-----------------------
T ss_pred HHHHhCCEEEEcCHHHHHHHHh-------------cC-CEEEEcCCcChHhcCcccc-----------------------
Confidence 7889999999999988776543 12 8999999999876644210
Q ss_pred HHhCCCCCCCceEEEEEeccccccCHHHHHHHHHHHhHcCcEEEEEecCCChhHHHHHHHHHHHhC-CCeEEEEeccCHH
Q 011163 297 QQLGLSKDASTIVVGCIFSDVSDVFLENLKAVVRGAKMRGIQFVFTGTNKLPSASRALVSFQEELK-DGIVIFVDSYDDA 375 (492)
Q Consensus 297 ~~lg~~~~~~~~~i~~~grl~~~Kg~~~li~a~~~l~~~~~~lvivG~g~~~~~~~~l~~~~~~~~-~~~v~~~~~~~~~ 375 (492)
.+ .++.++++|+||+.++||+ ++++.+. ..+++|+|+|+|+ +++++ .++|.|+|..+.+
T Consensus 217 ----~~-~~~~~~i~~vGrl~~~Kg~---~~~l~~~-~~~~~l~ivG~g~-----------~~~~~l~~~V~f~G~~~~~ 276 (406)
T 2hy7_A 217 ----SP-YAEGIHAVAVGSMLFDPEF---FVVASKA-FPQVTFHVIGSGM-----------GRHPGYGDNVIVYGEMKHA 276 (406)
T ss_dssp ----CS-CCSSEEEEEECCTTBCHHH---HHHHHHH-CTTEEEEEESCSS-----------CCCTTCCTTEEEECCCCHH
T ss_pred ----cc-cCCCcEEEEEeccccccCH---HHHHHHh-CCCeEEEEEeCch-----------HHhcCCCCCEEEcCCCCHH
Confidence 01 1123789999999999996 4444322 1479999999763 22232 3799999999988
Q ss_pred HHHHHHhcCCEEEECCCCCCCchHHHHHh-------hcCCceEEEecCCCcccccccccccccceeeee-ecCCCHHHHH
Q 011163 376 LLHLIFSGSDIILCHSFHDPLLQVPLKAL-------KYGAAPIAVTSSDIEFRHFAEFDHESTRFSRFI-SSTFGNISLS 447 (492)
Q Consensus 376 ~~~~~~~~adi~v~pS~~E~~glv~lEAm-------a~G~PvV~~~~~~gg~~e~v~~~~~~~g~~G~~-~~~~~~~~l~ 447 (492)
++..+|++||++|+||..|+||++++||| |||+|||+|+. |. ++.+|++ ++++|+++|+
T Consensus 277 ~l~~~~~~adv~v~ps~~E~~~~~~lEAm~Kl~eYla~G~PVIas~~--------v~-----~~~~G~l~v~~~d~~~la 343 (406)
T 2hy7_A 277 QTIGYIKHARFGIAPYASEQVPVYLADSSMKLLQYDFFGLPAVCPNA--------VV-----GPYKSRFGYTPGNADSVI 343 (406)
T ss_dssp HHHHHHHTCSEEECCBSCSCCCTTHHHHCHHHHHHHHHTCCEEEEGG--------GT-----CSCSSEEEECTTCHHHHH
T ss_pred HHHHHHHhcCEEEECCCcccCchHHHHHHHHHHHHhhCCCcEEEehh--------cc-----cCcceEEEeCCCCHHHHH
Confidence 99999999999999999999999999999 99999999863 33 3557899 9999999999
Q ss_pred HHHHHHhcCHHHHHHHHHHHHhccCCchhhHHHHHHHH--HHHHh
Q 011163 448 QALEEIKNNPLSWKRKIKDAMLQDFSWDADCNDIHISA--YTAIK 490 (492)
Q Consensus 448 ~ai~~~~~~~~~~~~~~~~a~~~~fsw~~~a~~~~~~~--Y~~l~ 490 (492)
++|..+++|++. ...++|||+.+++++ +++ |+++.
T Consensus 344 ~ai~~ll~~~~~-------~~~~~~sw~~~a~~~-~~~~~y~~~~ 380 (406)
T 2hy7_A 344 AAITQALEAPRV-------RYRQCLNWSDTTDRV-LDPRAYPETR 380 (406)
T ss_dssp HHHHHHHHCCCC-------CCSCCCBHHHHHHHH-HCGGGSGGGB
T ss_pred HHHHHHHhCcch-------hhhhcCCHHHHHHHH-HHhhcccccC
Confidence 999999998871 234789999999995 889 88653
No 19
>1uqt_A Alpha, alpha-trehalose-phosphate synthase; glycosyltransferase, transferase; HET: U2F; 2.0A {Escherichia coli} SCOP: c.87.1.6 PDB: 1uqu_A* 2wtx_A* 1gz5_A*
Probab=100.00 E-value=1.9e-31 Score=271.78 Aligned_cols=313 Identities=13% Similarity=0.035 Sum_probs=211.4
Q ss_pred HHHHHHHHHHHcCCCCCEEEEcCchhhhHHHHHHHHHhhcCCCCCcEEEEecCCCCCCCCCchhhhhcCCCcc--cc---
Q 011163 123 FSRASLDYIVKSRKQPDVLHIHNWETAIVGPLFWDIFVKQGLEGTRILLSCHNLNSLCLEHPDKLALCGLDPA--RL--- 197 (492)
Q Consensus 123 ~~~~~~~~~~~~~~~pDiVh~h~~~~~~~~~~~~~~~~~~~~~~~~~v~t~H~~~~~~~~~~~~~~~~~~~~~--~~--- 197 (492)
+.+.+.+.+.+.-..+||||+|+++..+++.++++. ..++|+++++|..... .+.+.. +++. .+
T Consensus 109 vN~~fa~~l~~~~~~~DiV~vHdyhl~~l~~~lr~~-----~~~~~i~~~~H~pfp~----~~~~~~--lp~~~~il~~l 177 (482)
T 1uqt_A 109 VNALLADKLLPLLQDDDIIWIHDYHLLPFAHELRKR-----GVNNRIGFFLHIPFPT----PEIFNA--LPTYDTLLEQL 177 (482)
T ss_dssp HHHHHHHHHGGGCCTTCEEEEESGGGTTHHHHHHHT-----TCCSCEEEECCSCCCC----HHHHTT--STTHHHHHHHH
T ss_pred HHHHHHHHHHHhcCCCCEEEEECchHHHHHHHHHHh-----CCCCcEEEEEcCCCCC----HHHHhh--CccHHHHHHhh
Confidence 344445545443346799999999888887777542 2579999999974211 111111 1110 00
Q ss_pred CCCCcccCCCCCccchhhHHHHhhcCceeccCccchhhhhhcccCCCccHHHhhhcCCeeeecCCCCCCCcCCCCCcccc
Q 011163 198 HRPDRLQDNTKTHLVNILKGGVVYSNKVVIVSSMHSKGRIIRSLSHGLESTLAIHQDKLLVAPCGFDSSTWDPSNDKFLT 277 (492)
Q Consensus 198 ~~~~~~~~~~~~~~~~~~~~~~~~ad~vi~vS~~~~~~~~~~~~~~~l~~~~~~~~~~~~vI~nGvd~~~f~p~~~~~~~ 277 (492)
...+.+.+. .....+..+..++.++++|...... . ..++ ...++.+||||||.+.|.+...
T Consensus 178 l~~d~i~f~----~~~~~~~f~~~~~~~l~~~~~~~~~-~-~~~g---------~~~~v~vip~GID~~~f~~~~~---- 238 (482)
T 1uqt_A 178 CDYDLLGFQ----TENDRLAFLDCLSNLTRVTTRSAKS-H-TAWG---------KAFRTEVYPIGIEPKEIAKQAA---- 238 (482)
T ss_dssp TTSSEEEES----SHHHHHHHHHHHHHHSCEEEETTTE-E-EETT---------EEEEEEECCCCCCHHHHHHHHH----
T ss_pred hccCeEEEE----CHHHHHHHHHHHHHHhCCccccCCe-E-EECC---------eEEEEEEEeccCCHHHHHHHhc----
Confidence 000001010 0122344445555556555443221 1 1111 2457899999999877654200
Q ss_pred cccCccCccChHHHHHHHHHHhCCCCCCCceEEEEEeccccccCHHHHHHHHHHHhHc------CcEEEEEecCC--C-h
Q 011163 278 ENYCAEDMKGKTVCKVTLQQQLGLSKDASTIVVGCIFSDVSDVFLENLKAVVRGAKMR------GIQFVFTGTNK--L-P 348 (492)
Q Consensus 278 ~~~~~~~~~~~~~~~~~~~~~lg~~~~~~~~~i~~~grl~~~Kg~~~li~a~~~l~~~------~~~lvivG~g~--~-~ 348 (492)
+ ..... +.++|++++ +.++|+++||+++.||++.+++|++++.+. +++|+++|.+. + +
T Consensus 239 ---~----~~~~~-~~~lr~~~~-----~~~vil~VgRl~~~Kgi~~ll~A~~~ll~~~p~~~~~v~Lv~vG~p~~~~~~ 305 (482)
T 1uqt_A 239 ---G----PLPPK-LAQLKAELK-----NVQNIFSVERLDYSKGLPERFLAYEALLEKYPQHHGKIRYTQIAPTSRGDVQ 305 (482)
T ss_dssp ---S----CCCHH-HHHHHHHTT-----TCEEEEEECCBCGGGCHHHHHHHHHHHHHHCGGGTTTEEEEEECCBCSTTSH
T ss_pred ---C----cchHH-HHHHHHHhC-----CCEEEEEEeCCcccCCHHHHHHHHHHHHHhCccccCcEEEEEEECCCccchH
Confidence 0 00111 456788886 237899999999999999999999998642 47899999431 1 1
Q ss_pred ---hHHHHHHHHHHHhCC-------CeEEEE-eccCHHHHHHHHhcCCEEEECCCCCCCchHHHHHhhcCC-----ceEE
Q 011163 349 ---SASRALVSFQEELKD-------GIVIFV-DSYDDALLHLIFSGSDIILCHSFHDPLLQVPLKALKYGA-----APIA 412 (492)
Q Consensus 349 ---~~~~~l~~~~~~~~~-------~~v~~~-~~~~~~~~~~~~~~adi~v~pS~~E~~glv~lEAma~G~-----PvV~ 412 (492)
.+.+++++++.+++. ..|+++ +.++.+++..+|++||+||+||.+||||+|++||||||+ |+|+
T Consensus 306 ~~~~l~~~l~~l~~~in~~~g~~~~~~v~~~~g~v~~~el~~ly~~ADv~v~pS~~EGfgLv~lEAmA~g~~~~~gpvV~ 385 (482)
T 1uqt_A 306 AYQDIRHQLENEAGRINGKYGQLGWTPLYYLNQHFDRKLLMKIFRYSDVGLVTPLRDGMNLVAKEYVAAQDPANPGVLVL 385 (482)
T ss_dssp HHHHHHHHHHHHHHHHHHHHCBTTBCSEEEECSCCCHHHHHHHHHHCSEEEECCSSBSCCHHHHHHHHHSCTTSCCEEEE
T ss_pred HHHHHHHHHHHHHHHHhhhcccCCCceEEEeCCCCCHHHHHHHHHHccEEEECCCcccCCchHHHHHHhCCCCCCCCEEE
Confidence 245566666655321 136654 566888999999999999999999999999999999997 8999
Q ss_pred EecCCCcccccccccccccceeeeeecCCCHHHHHHHHHHHhcC-HHHHHHHHHHHHh--ccCCchhhHHHHHHHHHHHH
Q 011163 413 VTSSDIEFRHFAEFDHESTRFSRFISSTFGNISLSQALEEIKNN-PLSWKRKIKDAML--QDFSWDADCNDIHISAYTAI 489 (492)
Q Consensus 413 ~~~~~gg~~e~v~~~~~~~g~~G~~~~~~~~~~l~~ai~~~~~~-~~~~~~~~~~a~~--~~fsw~~~a~~~~~~~Y~~l 489 (492)
|+. +|..+.+. +|++++|.|+++++++|..++++ ++.++++++++++ ++|||+..+++ +++.|+++
T Consensus 386 S~~--~G~~~~l~--------~g~lv~p~d~~~lA~ai~~lL~~~~~~r~~~~~~~~~~v~~~s~~~~a~~-~l~~l~~~ 454 (482)
T 1uqt_A 386 SQF--AGAANELT--------SALIVNPYDRDEVAAALDRALTMSLAERISRHAEMLDVIVKNDINHWQEC-FISDLKQI 454 (482)
T ss_dssp ETT--BGGGGTCT--------TSEEECTTCHHHHHHHHHHHHTCCHHHHHHHHHHHHHHHHHTCHHHHHHH-HHHHHHHS
T ss_pred ECC--CCCHHHhC--------CeEEECCCCHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHhCCHHHHHHH-HHHHHHhc
Confidence 998 78877773 37999999999999999999984 5667778777765 67999999999 48899875
No 20
>2vsy_A XCC0866; transferase, glycosyl transferase, GT-B, OGT, protein O-GLCN; HET: NHE; 2.10A {Xanthomonas campestris PV} PDB: 2jlb_A* 2xgm_A* 2xgo_A* 2xgs_A* 2vsn_A*
Probab=99.98 E-value=6.7e-31 Score=276.51 Aligned_cols=331 Identities=11% Similarity=0.055 Sum_probs=232.2
Q ss_pred cCCCceEEEEeeccccccccCcHHHHHhHHHHH--HHHCCCeEEEEeecCCCCCcccccccceeeeeeeeecCCeeeEEE
Q 011163 5 LRNGFHIIHICTEMDPLVSIGSLASYVTGLSGA--LQRKGHLVEVILPKYACMNLDGVQGLREIKAECYSYFNGQLHANK 82 (492)
Q Consensus 5 ~~~~mkIl~v~~~~~p~~~~GG~~~~~~~l~~~--L~~~Gh~V~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 82 (492)
++++|||+++++.+.+ ||++.++.+|++. +.+.||+|+++++...... .....+..
T Consensus 202 ~~~~~rI~~~~~~~~~----~g~~~~~~~l~~~L~~~~~~~~v~~~~~~~~~~~-~~~~~~~~----------------- 259 (568)
T 2vsy_A 202 SKGPLRVGFVSNGFGA----HPTGLLTVALFEALQRRQPDLQMHLFATSGDDGS-TLRTRLAQ----------------- 259 (568)
T ss_dssp SSSCEEEEEEESCSSS----SHHHHHHHHHHHHHHHHCTTEEEEEEESSCCCSC-HHHHHHHH-----------------
T ss_pred CCCCeEEEEECccccc----ChHHHHHHHHHhhccCCcccEEEEEEECCCCCcc-HHHHHHHh-----------------
Confidence 4567999999987543 7899999999999 7888999999997532111 00000100
Q ss_pred EEEEEECCeEEEEEccCCCCCCccCCCCCCCCChhHHHHHHHHHHHHHHHHcCCCCCEEEEcCchh--hhHHHHHHHHHh
Q 011163 83 IWIGVVSGIGVTFIQPLHYSSFFNRESVYGYSDDFERFTYFSRASLDYIVKSRKQPDVLHIHNWET--AIVGPLFWDIFV 160 (492)
Q Consensus 83 ~~~~~~~gv~v~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pDiVh~h~~~~--~~~~~~~~~~~~ 160 (492)
.+ .++.+. .. . ...+.+.+++ .+|||||.++.++ ...+. +..
T Consensus 260 ------~~-~~~~~~------------~~--~---------~~~l~~~i~~--~~~Div~~~~~~~~~~~~~~-~~~--- 303 (568)
T 2vsy_A 260 ------AS-TLHDVT------------AL--G---------HLATAKHIRH--HGIDLLFDLRGWGGGGRPEV-FAL--- 303 (568)
T ss_dssp ------TS-EEEECT------------TC--C---------HHHHHHHHHH--TTCSEEEECSSCTTCSSCHH-HHT---
T ss_pred ------cC-eEEECC------------CC--C---------HHHHHHHHHh--CCCCEEEECCCCCCcchHHH-Hhc---
Confidence 11 111111 00 0 0233444554 6899999876432 22222 211
Q ss_pred hcCCCCCcEEEEecCCCCCCCCCchhhhhcCCCccccCCCCcccCCCCCccchhhHHHHhhcCceeccCccchhhhhhcc
Q 011163 161 KQGLEGTRILLSCHNLNSLCLEHPDKLALCGLDPARLHRPDRLQDNTKTHLVNILKGGVVYSNKVVIVSSMHSKGRIIRS 240 (492)
Q Consensus 161 ~~~~~~~~~v~t~H~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ad~vi~vS~~~~~~~~~~~ 240 (492)
...|++++.|+..... ++. .+. ...+|.++++|+...+
T Consensus 304 ----~~~~~~~~~~~~~~~~----------~~~--------~~~--------------~~~~d~~i~~s~~~~~------ 341 (568)
T 2vsy_A 304 ----RPAPVQVNWLAYPGTS----------GAP--------WMD--------------YVLGDAFALPPALEPF------ 341 (568)
T ss_dssp ----CCSSEEEEESSSSSCC----------CCT--------TCC--------------EEEECTTTSCTTTGGG------
T ss_pred ----CCCceeEeeecCCccc----------CCC--------Cce--------------EEEECCCcCCcccccC------
Confidence 3568888888632100 100 000 0137888999885432
Q ss_pred cCCCccHHHhhhcCCeeeecCCCCCCCcCCCCCcccccccCccCccChHHHHHHHHHHhCCCCCCCceEEEEEecccccc
Q 011163 241 LSHGLESTLAIHQDKLLVAPCGFDSSTWDPSNDKFLTENYCAEDMKGKTVCKVTLQQQLGLSKDASTIVVGCIFSDVSDV 320 (492)
Q Consensus 241 ~~~~l~~~~~~~~~~~~vI~nGvd~~~f~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~lg~~~~~~~~~i~~~grl~~~K 320 (492)
+ .+++.+|||.++.....+.. .+...|+++|++.+ .+++++||+.+ |
T Consensus 342 ~-----------~~~i~~ipn~~~~~~~~~~~------------------~~~~~r~~~~~~~~---~~v~~~g~~~~-K 388 (568)
T 2vsy_A 342 Y-----------SEHVLRLQGAFQPSDTSRVV------------------AEPPSRTQCGLPEQ---GVVLCCFNNSY-K 388 (568)
T ss_dssp C-----------SSEEEECSSCSCCCCTTCCC------------------CCCCCTGGGTCCTT---SCEEEECCCGG-G
T ss_pred C-----------cceeEcCCCcCCCCCCCCCC------------------CCCCCccccCCCCC---CEEEEeCCccc-c
Confidence 1 26789999954432111110 00113466787653 24558999999 9
Q ss_pred CHHHHHHHHHHHhH--cCcEEEEEe-cCCChhHHHHHHHHHHHhCC--CeEEEEeccCHHHHHHHHhcCCEEEECCCCCC
Q 011163 321 FLENLKAVVRGAKM--RGIQFVFTG-TNKLPSASRALVSFQEELKD--GIVIFVDSYDDALLHLIFSGSDIILCHSFHDP 395 (492)
Q Consensus 321 g~~~li~a~~~l~~--~~~~lvivG-~g~~~~~~~~l~~~~~~~~~--~~v~~~~~~~~~~~~~~~~~adi~v~pS~~E~ 395 (492)
|++.+++|+.++.+ .+++|+|+| +| ...+.+++++++++. ++|+|+|..+.+++..+|+.||+||+||.+ +
T Consensus 389 ~~~~li~a~~~l~~~~~~~~l~i~G~~g---~~~~~l~~~~~~~~l~~~~v~~~g~~~~~~~~~~~~~adv~v~ps~~-~ 464 (568)
T 2vsy_A 389 LNPQSMARMLAVLREVPDSVLWLLSGPG---EADARLRAFAHAQGVDAQRLVFMPKLPHPQYLARYRHADLFLDTHPY-N 464 (568)
T ss_dssp CCHHHHHHHHHHHHHCTTCEEEEECCST---THHHHHHHHHHHTTCCGGGEEEECCCCHHHHHHHGGGCSEEECCSSS-C
T ss_pred CCHHHHHHHHHHHHhCCCcEEEEecCCH---HHHHHHHHHHHHcCCChhHEEeeCCCCHHHHHHHHhcCCEEeeCCCC-C
Confidence 99999999999865 379999999 55 356788888888753 689999988888889999999999999999 9
Q ss_pred CchHHHHHhhcCCceEE-------EecCCC-------cccccccccccccceeeeeecCCCHHHHHHHHHHHhcCHHHHH
Q 011163 396 LLQVPLKALKYGAAPIA-------VTSSDI-------EFRHFAEFDHESTRFSRFISSTFGNISLSQALEEIKNNPLSWK 461 (492)
Q Consensus 396 ~glv~lEAma~G~PvV~-------~~~~~g-------g~~e~v~~~~~~~g~~G~~~~~~~~~~l~~ai~~~~~~~~~~~ 461 (492)
||++++|||+||+|||+ |+. | |++|+|. .|+++++++|..+++|++.++
T Consensus 465 ~g~~~lEAma~G~Pvv~~~g~~~~s~~--~~~~l~~~g~~e~v~---------------~~~~~la~~i~~l~~~~~~~~ 527 (568)
T 2vsy_A 465 AHTTASDALWTGCPVLTTPGETFAARV--AGSLNHHLGLDEMNV---------------ADDAAFVAKAVALASDPAALT 527 (568)
T ss_dssp CSHHHHHHHHTTCCEEBCCCSSGGGSH--HHHHHHHHTCGGGBC---------------SSHHHHHHHHHHHHHCHHHHH
T ss_pred CcHHHHHHHhCCCCEEeccCCCchHHH--HHHHHHHCCChhhhc---------------CCHHHHHHHHHHHhcCHHHHH
Confidence 99999999999999999 998 8 8888764 188899999999999999999
Q ss_pred HHHHHHHh-----ccCCchhhHHHHHHHHHHHHh
Q 011163 462 RKIKDAML-----QDFSWDADCNDIHISAYTAIK 490 (492)
Q Consensus 462 ~~~~~a~~-----~~fsw~~~a~~~~~~~Y~~l~ 490 (492)
+++++++. +.|||+.+++++ +++|+++.
T Consensus 528 ~~~~~~~~~~~~~~~f~~~~~~~~~-~~~y~~~~ 560 (568)
T 2vsy_A 528 ALHARVDVLRRASGVFHMDGFADDF-GALLQALA 560 (568)
T ss_dssp HHHHHHHHHHHHSSTTCHHHHHHHH-HHHHHHHH
T ss_pred HHHHHHHHhhhcCCCCCHHHHHHHH-HHHHHHHH
Confidence 99988754 579999999995 99999773
No 21
>3beo_A UDP-N-acetylglucosamine 2-epimerase; UDP-GLCNAC, allosteric, regulation, isomerase; HET: UD1 UDP; 1.70A {Bacillus anthracis} PDB: 1o6c_A
Probab=99.97 E-value=6.6e-31 Score=261.78 Aligned_cols=281 Identities=10% Similarity=0.081 Sum_probs=194.6
Q ss_pred HHHHHHHHHcCCCCCEEEEcCc-hhhhHHHHHHHHHhhcCCCCCcEEEEecCCCCCCCCCchhhhhcCCCccccCCCCcc
Q 011163 125 RASLDYIVKSRKQPDVLHIHNW-ETAIVGPLFWDIFVKQGLEGTRILLSCHNLNSLCLEHPDKLALCGLDPARLHRPDRL 203 (492)
Q Consensus 125 ~~~~~~~~~~~~~pDiVh~h~~-~~~~~~~~~~~~~~~~~~~~~~~v~t~H~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 203 (492)
..+.+.+++ .+||+||+|.. ...+.+.++++. .++|+|++.|+...... +
T Consensus 85 ~~l~~~l~~--~~pDvv~~~~~~~~~~~~~~~~~~------~~ip~v~~~~~~~~~~~---------------~------ 135 (375)
T 3beo_A 85 EGLDKVMKE--AKPDIVLVHGDTTTTFIASLAAFY------NQIPVGHVEAGLRTWDK---------------Y------ 135 (375)
T ss_dssp HHHHHHHHH--HCCSEEEEETTSHHHHHHHHHHHH------TTCCEEEESCCCCCSCT---------------T------
T ss_pred HHHHHHHHH--hCCCEEEEeCCchHHHHHHHHHHH------HCCCEEEEecccccccc---------------c------
Confidence 334445544 68999999863 333333333332 68999988775411000 0
Q ss_pred cCCCCCccchhhHHHH-hhcCceeccCccchhhhhhcccCCCccHHHhhhcCCeeeecCC-CCCCCcCCCCCcccccccC
Q 011163 204 QDNTKTHLVNILKGGV-VYSNKVVIVSSMHSKGRIIRSLSHGLESTLAIHQDKLLVAPCG-FDSSTWDPSNDKFLTENYC 281 (492)
Q Consensus 204 ~~~~~~~~~~~~~~~~-~~ad~vi~vS~~~~~~~~~~~~~~~l~~~~~~~~~~~~vI~nG-vd~~~f~p~~~~~~~~~~~ 281 (492)
..+ ...+.+..+ +.+|.++++|+..++.+.. .|. +++++.+|+|| +|...+.+...
T Consensus 136 ~~~----~~~~~~~~~~~~~d~ii~~s~~~~~~~~~--~g~--------~~~~i~vi~n~~~d~~~~~~~~~-------- 193 (375)
T 3beo_A 136 SPY----PEEMNRQLTGVMADLHFSPTAKSATNLQK--ENK--------DESRIFITGNTAIDALKTTVKET-------- 193 (375)
T ss_dssp SST----THHHHHHHHHHHCSEEEESSHHHHHHHHH--TTC--------CGGGEEECCCHHHHHHHHHCCSS--------
T ss_pred CCC----hhHhhhhHHhhhhheeeCCCHHHHHHHHH--cCC--------CcccEEEECChhHhhhhhhhhhh--------
Confidence 000 012233333 4599999999988776654 221 35689999999 78654433210
Q ss_pred ccCccChHHHHHHHHHHhCCCCCCCceEEEEEeccccc-cCHHHHHHHHHHHhHc--CcEEEEEecCCChhHHHHHHHHH
Q 011163 282 AEDMKGKTVCKVTLQQQLGLSKDASTIVVGCIFSDVSD-VFLENLKAVVRGAKMR--GIQFVFTGTNKLPSASRALVSFQ 358 (492)
Q Consensus 282 ~~~~~~~~~~~~~~~~~lg~~~~~~~~~i~~~grl~~~-Kg~~~li~a~~~l~~~--~~~lvivG~g~~~~~~~~l~~~~ 358 (492)
.+..+++++ + ++..+++++||+.+. ||++.|++|++++.+. ++++++ |.|++..+.+.++++.
T Consensus 194 ---------~~~~~~~~~--~--~~~~vl~~~gr~~~~~K~~~~li~a~~~l~~~~~~~~~i~-~~g~~~~~~~~~~~~~ 259 (375)
T 3beo_A 194 ---------YSHPVLEKL--G--NNRLVLMTAHRRENLGEPMRNMFRAIKRLVDKHEDVQVVY-PVHMNPVVRETANDIL 259 (375)
T ss_dssp ---------CCCHHHHTT--T--TSEEEEEECCCGGGTTHHHHHHHHHHHHHHHHCTTEEEEE-ECCSCHHHHHHHHHHH
T ss_pred ---------hhHHHHHhc--c--CCCeEEEEecccccchhHHHHHHHHHHHHHhhCCCeEEEE-eCCCCHHHHHHHHHHh
Confidence 011233333 2 234567889999876 9999999999998752 688655 5464433444454442
Q ss_pred HHhCCCeEEEEeccCHHHHHHHHhcCCEEEECCCCCCCchHHHHHhhcCCceEEEe-cCCCcccccccccccccceeeee
Q 011163 359 EELKDGIVIFVDSYDDALLHLIFSGSDIILCHSFHDPLLQVPLKALKYGAAPIAVT-SSDIEFRHFAEFDHESTRFSRFI 437 (492)
Q Consensus 359 ~~~~~~~v~~~~~~~~~~~~~~~~~adi~v~pS~~E~~glv~lEAma~G~PvV~~~-~~~gg~~e~v~~~~~~~g~~G~~ 437 (492)
.. .++|+|++.....++..+|+.||++|+|| |.+++|||+||+|+|+++ . ||.+|+++ +| +|++
T Consensus 260 ~~--~~~v~~~g~~~~~~~~~~~~~ad~~v~~s-----g~~~lEA~a~G~Pvi~~~~~--~~~~e~v~-----~g-~g~~ 324 (375)
T 3beo_A 260 GD--YGRIHLIEPLDVIDFHNVAARSYLMLTDS-----GGVQEEAPSLGVPVLVLRDT--TERPEGIE-----AG-TLKL 324 (375)
T ss_dssp TT--CTTEEEECCCCHHHHHHHHHTCSEEEECC-----HHHHHHHHHHTCCEEECSSC--CSCHHHHH-----TT-SEEE
T ss_pred hc--cCCEEEeCCCCHHHHHHHHHhCcEEEECC-----CChHHHHHhcCCCEEEecCC--CCCceeec-----CC-ceEE
Confidence 22 26899988787778889999999999999 777999999999999995 5 78888876 35 7999
Q ss_pred ecCCCHHHHHHHHHHHhcCHHHHHHHHHHHHh--ccCCchhhHHHHHHHHHH
Q 011163 438 SSTFGNISLSQALEEIKNNPLSWKRKIKDAML--QDFSWDADCNDIHISAYT 487 (492)
Q Consensus 438 ~~~~~~~~l~~ai~~~~~~~~~~~~~~~~a~~--~~fsw~~~a~~~~~~~Y~ 487 (492)
+++ |+++|+++|..+++|++.+++|+++++. +.|+|+.+++++ +++++
T Consensus 325 v~~-d~~~la~~i~~ll~~~~~~~~~~~~~~~~~~~~~~~~i~~~~-~~~~~ 374 (375)
T 3beo_A 325 AGT-DEETIFSLADELLSDKEAHDKMSKASNPYGDGRASERIVEAI-LKHFN 374 (375)
T ss_dssp CCS-CHHHHHHHHHHHHHCHHHHHHHCCCCCTTCCSCHHHHHHHHH-HHHTT
T ss_pred cCC-CHHHHHHHHHHHHhChHhHhhhhhcCCCCCCCcHHHHHHHHH-HHHhh
Confidence 986 9999999999999999999999888765 679999999985 76653
No 22
>1vgv_A UDP-N-acetylglucosamine 2-epimerase; structural genomics, isomerase; HET: UD1; 2.31A {Escherichia coli} SCOP: c.87.1.3 PDB: 1f6d_A*
Probab=99.97 E-value=7.6e-31 Score=262.25 Aligned_cols=293 Identities=10% Similarity=0.042 Sum_probs=201.7
Q ss_pred HHHHHHHHHcCCCCCEEEEcCc-hhhhHHHHHHHHHhhcCCCCCcEEEEecCCCCCCCCCchhhhhcCCCccccCCCCcc
Q 011163 125 RASLDYIVKSRKQPDVLHIHNW-ETAIVGPLFWDIFVKQGLEGTRILLSCHNLNSLCLEHPDKLALCGLDPARLHRPDRL 203 (492)
Q Consensus 125 ~~~~~~~~~~~~~pDiVh~h~~-~~~~~~~~~~~~~~~~~~~~~~~v~t~H~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 203 (492)
..+.+++++ .+||+||+|.. ...+.+.++++ ..++|+|++.|+...... +..
T Consensus 76 ~~l~~~l~~--~~pDvv~~~~~~~~~~~~~~~a~------~~~ip~v~~~~~~~~~~~------------~~~------- 128 (384)
T 1vgv_A 76 EGLKPILAE--FKPDVVLVHGDTTTTLATSLAAF------YQRIPVGHVEAGLRTGDL------------YSP------- 128 (384)
T ss_dssp HHHHHHHHH--HCCSEEEEETTCHHHHHHHHHHH------TTTCCEEEESCCCCCSCT------------TSS-------
T ss_pred HHHHHHHHH--hCCCEEEEeCCchHHHHHHHHHH------HHCCCEEEEecccccccc------------cCC-------
Confidence 444455554 68999999974 44443333322 268999999987531000 000
Q ss_pred cCCCCCccchhhHHH-HhhcCceeccCccchhhhhhcccCCCccHHHhhhcCCeeeecCCC-CCCCcCCCCCcccccccC
Q 011163 204 QDNTKTHLVNILKGG-VVYSNKVVIVSSMHSKGRIIRSLSHGLESTLAIHQDKLLVAPCGF-DSSTWDPSNDKFLTENYC 281 (492)
Q Consensus 204 ~~~~~~~~~~~~~~~-~~~ad~vi~vS~~~~~~~~~~~~~~~l~~~~~~~~~~~~vI~nGv-d~~~f~p~~~~~~~~~~~ 281 (492)
+ .....+.. .+.+|.++++|+..++.+.. .|. +++++.+++||+ |...+.+..
T Consensus 129 -~-----~~~~~~~~~~~~~d~ii~~s~~~~~~l~~--~g~--------~~~~i~vi~n~~~d~~~~~~~~--------- 183 (384)
T 1vgv_A 129 -W-----PEEANRTLTGHLAMYHFSPTETSRQNLLR--ENV--------ADSRIFITGNTVIDALLWVRDQ--------- 183 (384)
T ss_dssp -T-----THHHHHHHHHTTCSEEEESSHHHHHHHHH--TTC--------CGGGEEECCCHHHHHHHHHHHH---------
T ss_pred -C-----chHhhHHHHHhhccEEEcCcHHHHHHHHH--cCC--------ChhhEEEeCChHHHHHHhhhhc---------
Confidence 0 01122333 35599999999988776643 231 346799999995 421111000
Q ss_pred ccCccChHHHHHHHHHHhC-CCCCCCceEEEEEeccccc-cCHHHHHHHHHHHhHc--CcEEEEEecCCChhHHHHHHHH
Q 011163 282 AEDMKGKTVCKVTLQQQLG-LSKDASTIVVGCIFSDVSD-VFLENLKAVVRGAKMR--GIQFVFTGTNKLPSASRALVSF 357 (492)
Q Consensus 282 ~~~~~~~~~~~~~~~~~lg-~~~~~~~~~i~~~grl~~~-Kg~~~li~a~~~l~~~--~~~lvivG~g~~~~~~~~l~~~ 357 (492)
.......+.++++++| ++.+ +..+++++||+.+. ||++.|++|+.++.+. +++|++++ |+.+.+.+.++++
T Consensus 184 ---~~~~~~~~~~~~~~~~~~~~~-~~~vl~~~gr~~~~~kg~~~li~a~~~l~~~~~~~~l~i~~-g~~~~~~~~l~~~ 258 (384)
T 1vgv_A 184 ---VMSSDKLRSELAANYPFIDPD-KKMILVTGHRRESFGRGFEEICHALADIATTHQDIQIVYPV-HLNPNVREPVNRI 258 (384)
T ss_dssp ---TTTCHHHHHHHHTTCTTCCTT-SEEEEEECCCBSSCCHHHHHHHHHHHHHHHHCTTEEEEEEC-CBCHHHHHHHHHH
T ss_pred ---cccchhhhHHHHHhccccCCC-CCEEEEEeCCccccchHHHHHHHHHHHHHhhCCCeEEEEEc-CCCHHHHHHHHHH
Confidence 0000001235667777 6432 34578899999876 9999999999998753 78888864 3223355666665
Q ss_pred HHHhCCCeEEEEeccCHHHHHHHHhcCCEEEECCCCCCCchHHHHHhhcCCceEEEecCCCcccccccccccccceeeee
Q 011163 358 QEELKDGIVIFVDSYDDALLHLIFSGSDIILCHSFHDPLLQVPLKALKYGAAPIAVTSSDIEFRHFAEFDHESTRFSRFI 437 (492)
Q Consensus 358 ~~~~~~~~v~~~~~~~~~~~~~~~~~adi~v~pS~~E~~glv~lEAma~G~PvV~~~~~~gg~~e~v~~~~~~~g~~G~~ 437 (492)
... .++|.|++....+++..+|+.||++|+|| |.+++|||+||+|+|+++. .||..|+++ +| +|++
T Consensus 259 ~~~--~~~v~~~g~~~~~~~~~~~~~ad~~v~~S-----g~~~lEA~a~G~PvI~~~~-~~~~~e~v~-----~g-~g~l 324 (384)
T 1vgv_A 259 LGH--VKNVILIDPQEYLPFVWLMNHAWLILTDS-----GGIQEEAPSLGKPVLVMRD-TTERPEAVT-----AG-TVRL 324 (384)
T ss_dssp HTT--CTTEEEECCCCHHHHHHHHHHCSEEEESS-----STGGGTGGGGTCCEEEESS-CCSCHHHHH-----HT-SEEE
T ss_pred hhc--CCCEEEeCCCCHHHHHHHHHhCcEEEECC-----cchHHHHHHcCCCEEEccC-CCCcchhhh-----CC-ceEE
Confidence 433 26899987676678889999999999999 4458999999999999974 178888875 35 7899
Q ss_pred ecCCCHHHHHHHHHHHhcCHHHHHHHHHHHHh--ccCCchhhHHHHHHHHHHHHh
Q 011163 438 SSTFGNISLSQALEEIKNNPLSWKRKIKDAML--QDFSWDADCNDIHISAYTAIK 490 (492)
Q Consensus 438 ~~~~~~~~l~~ai~~~~~~~~~~~~~~~~a~~--~~fsw~~~a~~~~~~~Y~~l~ 490 (492)
+++ |+++|+++|..+++|++.+++|+++++. ..|+|+.+++.+ +++|.++.
T Consensus 325 v~~-d~~~la~~i~~ll~d~~~~~~~~~~~~~~~~~~~~~~i~~~~-~~~~~~~~ 377 (384)
T 1vgv_A 325 VGT-DKQRIVEEVTRLLKDENEYQAMSRAHNPYGDGQACSRILEAL-KNNRISLG 377 (384)
T ss_dssp ECS-SHHHHHHHHHHHHHCHHHHHHHHSSCCTTCCSCHHHHHHHHH-HHTCCCC-
T ss_pred eCC-CHHHHHHHHHHHHhChHHHhhhhhccCCCcCCCHHHHHHHHH-HHHHHhhc
Confidence 987 9999999999999999999999988765 679999999995 88887664
No 23
>2c4m_A Glycogen phosphorylase; allosteric control, phosphate dependence, starch degrading, transferase, glycosyltransferase; HET: PLP; 1.9A {Corynebacterium callunae}
Probab=99.96 E-value=1.9e-27 Score=246.93 Aligned_cols=449 Identities=15% Similarity=0.104 Sum_probs=298.7
Q ss_pred ccCcHHHHHhHHHHHHHHCCCeEEEEeecCCCCC--------------cccccc---cc--eeeeeeeeecCCeeeEEEE
Q 011163 23 SIGSLASYVTGLSGALQRKGHLVEVILPKYACMN--------------LDGVQG---LR--EIKAECYSYFNGQLHANKI 83 (492)
Q Consensus 23 ~~GG~~~~~~~l~~~L~~~Gh~V~vi~~~~~~~~--------------~~~~~~---~~--~~~~~~~~~~~~~~~~~~~ 83 (492)
..||+|+........++.+|....-+...|.... +.+... .. .......|.++|.....--
T Consensus 112 gnGGLGrLAac~ldS~a~l~~p~~G~Gl~Y~~G~F~Q~i~dG~Q~E~~d~wl~~g~pwe~~r~~~~~~V~f~g~~v~a~~ 191 (796)
T 2c4m_A 112 GNGGLGRLAACFLDSAVTQDYPVTGYGLLYRFGLFRQSFNEGFQVEKPDPWREEEYPFTIRRASDQLVVCFDDMKTRAIP 191 (796)
T ss_dssp CCSHHHHHHHHHHHHHHHTTCCEEEEEECCSSCSCEEEEETTEEEEECCCSSSSCCTTSEECGGGCEEEEETTEEEEEEE
T ss_pred CCCcHHHHHHHHHHHHHhCCCCeEEEeecccCCCeEEEeeCCEEEeeCCccccCCCceeEecCCcEEEEEeCCEEEEEEE
Confidence 6799999999999999999999999988766421 000000 00 0011233455654222111
Q ss_pred EEEEECC--------eEEEEEccCCCCCC----ccC-----------------CCCCCCCC----hhHHH---HHHHHHH
Q 011163 84 WIGVVSG--------IGVTFIQPLHYSSF----FNR-----------------ESVYGYSD----DFERF---TYFSRAS 127 (492)
Q Consensus 84 ~~~~~~g--------v~v~~i~~~~~~~~----~~~-----------------~~~~~~~~----~~~~~---~~~~~~~ 127 (492)
+...+.| +++....+. ..| |.. ..+|+-.. ...|+ .+|..+.
T Consensus 192 yd~pi~gy~~~~~n~lrlW~a~~~--~~f~l~~fn~gdy~~a~~~~~~~~~It~~LYp~D~~~~Gk~lRL~Qe~ff~~a~ 269 (796)
T 2c4m_A 192 YDMPITGYGTHNVGTLRLWKAEPW--EEFDYDAFNAQRFTDAIIERERVSDICRVLYPNDTTYEGKKLRVRQQYFFTSAS 269 (796)
T ss_dssp EEEEECCTTCCCCEEEEEEEEEES--SSSCHHHHHTTCHHHHHHHHHHHHHHHHSSSCCCSSHHHHHHHHHHHHHHHHHH
T ss_pred EeccccCcCCCceEEEEEEecccc--cccchhhccCcchhhhhhchHhhhchhhcCcCCCCCcchHHHHHHhHHHHHHHH
Confidence 1112222 122222211 111 101 01333211 23333 5666777
Q ss_pred HHH-HHHc-----CC----CCCEEEEcCchhhhHHH-HHHHHHhhcC--------CCCCcEEEEecCCCCCCC--CCchh
Q 011163 128 LDY-IVKS-----RK----QPDVLHIHNWETAIVGP-LFWDIFVKQG--------LEGTRILLSCHNLNSLCL--EHPDK 186 (492)
Q Consensus 128 ~~~-~~~~-----~~----~pDiVh~h~~~~~~~~~-~~~~~~~~~~--------~~~~~~v~t~H~~~~~~~--~~~~~ 186 (492)
++. +++. .. +||+||+|+||++++++ +++...-..+ .....+++|.|++.++|. +|.+.
T Consensus 270 lq~ilr~~~~~~~~l~~l~~p~viHlNDtHpal~i~ElmR~l~d~~~~~~d~A~~i~~~~~vyT~HTl~~egle~wp~~l 349 (796)
T 2c4m_A 270 LQAMIQDHLAHHKDLSNFAEFHSVQLNDTHPVLAIPELMRLLMDEHDMGWEESWAIVSKTFAYTNHTVLTEALEQWDEQI 349 (796)
T ss_dssp HHHHHHHHHHHSSCSTTHHHHEEEEEESSTTTTHHHHHHHHHHHHSCCCHHHHHHHHHHHEEEECCCSSSTTSCEEEHHH
T ss_pred HHHHHHHHHHhCCChhhcCCCeEEEeCCChHHhHHHHHHHHHhhhcCCCHHHHHHHhhccEEEEecCchHHHhhhCCHHH
Confidence 764 3321 11 68999999999999877 4432210000 024578999999998885 44433
Q ss_pred hhh-c--------CCCccccCC----C------Cc--ccCCCCCccchhhHHHHhhcCceeccCccchhhhhhcccCCCc
Q 011163 187 LAL-C--------GLDPARLHR----P------DR--LQDNTKTHLVNILKGGVVYSNKVVIVSSMHSKGRIIRSLSHGL 245 (492)
Q Consensus 187 ~~~-~--------~~~~~~~~~----~------~~--~~~~~~~~~~~~~~~~~~~ad~vi~vS~~~~~~~~~~~~~~~l 245 (492)
+.. + +++..++.. + .+ +... ..+++.+.++..|+.|.+||+.+++.+....++
T Consensus 350 ~~~~lpr~~~ii~~I~~~~~~~~~~~~~~~~~~~~~~i~~~---~~vnMa~lai~~S~~VNgVS~lHae~ik~~~f~--- 423 (796)
T 2c4m_A 350 FQQLFWRVWEIIAEIDRRFRLERAADGLDEETINRMAPIQH---GTVHMAWIACYAAYSINGVAALHTEIIKAETLA--- 423 (796)
T ss_dssp HHHHCHHHHHHHHHHHHHHHHHHHHTTCCHHHHHHHCSEET---TEEEHHHHHHHHCSEEEESSHHHHHHHHHTTTH---
T ss_pred HHHHhHHHHHHHcCcCHHHHHHHHhcCCcHhhhhcccceeC---CcccHHHHHHHhcCceeeccHHHHHHhhhhhhh---
Confidence 211 0 111100000 0 00 1111 247899999999999999999999988765554
Q ss_pred cHHHhhhcCCeeeecCCCCCCCc----CCCCCcccccccC-----------------ccC-------ccChHHHHHH---
Q 011163 246 ESTLAIHQDKLLVAPCGFDSSTW----DPSNDKFLTENYC-----------------AED-------MKGKTVCKVT--- 294 (492)
Q Consensus 246 ~~~~~~~~~~~~vI~nGvd~~~f----~p~~~~~~~~~~~-----------------~~~-------~~~~~~~~~~--- 294 (492)
..+...+.++.-|.||||...| +|..+..+...+. +++ ++.|..+|..
T Consensus 424 -~~~~~~p~kf~~iTNGI~~rrWl~~~NP~l~~li~~~~g~~~w~~d~~~l~~l~~~~~d~~~~~~l~~~K~~nK~~L~~ 502 (796)
T 2c4m_A 424 -DWYALWPEKFNNKTNGVTPRRWLRMINPGLSDLLTRLSGSDDWVTDLDELKKLRSYADDKSVLEELRAIKAANKQDFAE 502 (796)
T ss_dssp -HHHHHCGGGEEECCCCBCTCCCCCTTCHHHHHHHHHHHSSSGGGGCGGGGGGGGGGGGCHHHHHHHHHHHHHHHHHHHH
T ss_pred -hHHHcCccccccccCCcchHHhhcccCHhHHHHHHHhcCchhhhhChHHHHHHHhhCCCHHHHHHHHHHHHHHHHHHHH
Confidence 3444567899999999999999 6765555544444 444 3456666777
Q ss_pred -HHHHhCCCCCCCceEEEEEeccccccCHHH-HHHHHHHHhH---------cCcEEEEEecCCChhHHHH------HHHH
Q 011163 295 -LQQQLGLSKDASTIVVGCIFSDVSDVFLEN-LKAVVRGAKM---------RGIQFVFTGTNKLPSASRA------LVSF 357 (492)
Q Consensus 295 -~~~~lg~~~~~~~~~i~~~grl~~~Kg~~~-li~a~~~l~~---------~~~~lvivG~g~~~~~~~~------l~~~ 357 (492)
+++++|++.+++.++++++.|+..+||.++ ++.++.++.+ .+.++++.|.+ +|.+... +..+
T Consensus 503 ~l~~~~Gl~vdpd~l~~~~vkRlheYKRq~Lnil~ii~~~~~i~~~~~~~~~p~q~If~GKA-~P~y~~aK~iIk~i~~v 581 (796)
T 2c4m_A 503 WILERQGIEIDPESIFDVQIKRLHEYKRQLMNALYVLDLYFRIKEDGLTDIPARTVIFGAKA-APGYVRAKAIIKLINSI 581 (796)
T ss_dssp HHHHHHCCCCCTTSEEEEEECCCCGGGTHHHHHHHHHHHHHHHHTSCCCSSCCEEEEEECCC-CTTCHHHHHHHHHHHHH
T ss_pred HHHHHhCCCCCCCCcEEEEeecchhhcccCEeHHHHHHHHHHHhhCCCCCCCCeEEEEEecC-CHhHHHHHHHHHHHHHH
Confidence 589999998888999999999999999999 8888877753 36899999954 4445444 6666
Q ss_pred HH------HhCCC--eEEEEeccCHHHHHHHHhcCCEEEECCC--CCCCchHHHHHhhcCCceEEEecCCCccccccccc
Q 011163 358 QE------ELKDG--IVIFVDSYDDALLHLIFSGSDIILCHSF--HDPLLQVPLKALKYGAAPIAVTSSDIEFRHFAEFD 427 (492)
Q Consensus 358 ~~------~~~~~--~v~~~~~~~~~~~~~~~~~adi~v~pS~--~E~~glv~lEAma~G~PvV~~~~~~gg~~e~v~~~ 427 (492)
++ .. .+ +|.|+..|+....+.++++||++..||. +|++|++.|-||..|+++|++-. |...|+.+..
T Consensus 582 a~~in~dp~~-~~~lKVvFl~nY~vslA~~I~~gaDv~l~~S~a~~EAsGTs~MKam~NGaL~iGtLD--GanvEi~e~v 658 (796)
T 2c4m_A 582 ADLVNNDPEV-SPLLKVVFVENYNVSPAEHILPASDVSEQISTAGKEASGTSNMKFMMNGALTLGTMD--GANVEIVDSV 658 (796)
T ss_dssp HHHHHTCTTT-TTTEEEEEETTCCHHHHHHHGGGCSEEEECCCTTSCSCCHHHHHHHHTTCEEEEESS--THHHHHHHHH
T ss_pred HHHhcccccc-CCceEEEEECCCCHHHHHHHhhhcceeecCCCCCCCCCchHHHHHHHcCCeEEeccC--CeEeehhhhc
Confidence 65 34 26 8999999999999999999999999999 99999999999999999999888 8888875431
Q ss_pred ccccceeeeeecC--CCHHHHHH---HHHHHhcCHHHHHHHHHHHHhccCCchhhHHHHHHHHHHHHh
Q 011163 428 HESTRFSRFISST--FGNISLSQ---ALEEIKNNPLSWKRKIKDAMLQDFSWDADCNDIHISAYTAIK 490 (492)
Q Consensus 428 ~~~~g~~G~~~~~--~~~~~l~~---ai~~~~~~~~~~~~~~~~a~~~~fsw~~~a~~~~~~~Y~~l~ 490 (492)
..+|||+|.. .++.++.. +...+.++| .++++..+++...|||... .+ |..+|+++.
T Consensus 659 ---G~~NgF~FG~~~~ev~~l~~~y~a~~~y~~~~-~~~~vvd~~~~g~fs~~~~-~~-y~~Ly~~L~ 720 (796)
T 2c4m_A 659 ---GEENAYIFGARVEELPALRESYKPYELYETVP-GLKRALDALDNGTLNDNNS-GL-FYDLKHSLI 720 (796)
T ss_dssp ---CGGGSEEESCCTTTHHHHHHTCCHHHHHHHST-THHHHHHTTTSSSSCCTTC-CH-HHHHHHHHH
T ss_pred ---CCCcEEEecCchhhHHHHHHhhChHHHhhcCH-HHHHHHHHHHcCCCCCCCH-HH-HHHHHHHHH
Confidence 1358999987 67777765 344444566 4777778877789999987 67 599999873
No 24
>2bfw_A GLGA glycogen synthase; glycosyltransferase family 5 UDP/ADP-glucose-glycogen syntha rossman folds, transferase; 1.8A {Pyrococcus abyssi} SCOP: c.87.1.8
Probab=99.96 E-value=5.8e-28 Score=218.62 Aligned_cols=184 Identities=16% Similarity=0.207 Sum_probs=156.5
Q ss_pred ecCCCCCCCcC--CCCCcccccccCccCccChHHHHHHHHHHhCCCCCCCceEEEEEeccc-cccCHHHHHHHHHHHh--
Q 011163 259 APCGFDSSTWD--PSNDKFLTENYCAEDMKGKTVCKVTLQQQLGLSKDASTIVVGCIFSDV-SDVFLENLKAVVRGAK-- 333 (492)
Q Consensus 259 I~nGvd~~~f~--p~~~~~~~~~~~~~~~~~~~~~~~~~~~~lg~~~~~~~~~i~~~grl~-~~Kg~~~li~a~~~l~-- 333 (492)
||||+|.+.|. |... ...+.+..+++++|++.+ ++++++||+. +.||++.+++|+..+.
T Consensus 2 ipngvd~~~f~~~~~~~-------------~~~~~~~~~r~~~~~~~~---~~i~~~G~~~~~~K~~~~li~a~~~l~~~ 65 (200)
T 2bfw_A 2 SHNGIDCSFWNESYLTG-------------SRDERKKSLLSKFGMDEG---VTFMFIGRFDRGQKGVDVLLKAIEILSSK 65 (200)
T ss_dssp ---CCCTTTSSGGGSCS-------------CHHHHHHHHHHHTTCCSC---EEEEEESCBCSSSSCHHHHHHHHHHHTTS
T ss_pred CCCccChhhcccccccc-------------chhhHHHHHHHHcCCCCC---CEEEEeeccccccCCHHHHHHHHHHHHhh
Confidence 89999999988 7521 122346778999999743 5899999999 9999999999999995
Q ss_pred H--cCcEEEEEecCCChhHHHHHHHHHHHhCCCeEEE-EeccCHHHHHHHHhcCCEEEECCCCCCCchHHHHHhhcCCce
Q 011163 334 M--RGIQFVFTGTNKLPSASRALVSFQEELKDGIVIF-VDSYDDALLHLIFSGSDIILCHSFHDPLLQVPLKALKYGAAP 410 (492)
Q Consensus 334 ~--~~~~lvivG~g~~~~~~~~l~~~~~~~~~~~v~~-~~~~~~~~~~~~~~~adi~v~pS~~E~~glv~lEAma~G~Pv 410 (492)
+ .+++|+|+|.++ +...+.+++++++++ +|++ +|..+.+++..+|+.||++++||.+|+||++++|||+||+|+
T Consensus 66 ~~~~~~~l~i~G~~~-~~~~~~l~~~~~~~~--~v~~~~g~~~~~~~~~~~~~ad~~l~ps~~e~~~~~~~Ea~a~G~Pv 142 (200)
T 2bfw_A 66 KEFQEMRFIIIGKGD-PELEGWARSLEEKHG--NVKVITEMLSREFVRELYGSVDFVIIPSYFEPFGLVALEAMCLGAIP 142 (200)
T ss_dssp GGGGGEEEEEECCBC-HHHHHHHHHHHHHCT--TEEEECSCCCHHHHHHHHTTCSEEEECCSCCSSCHHHHHHHHTTCEE
T ss_pred ccCCCeEEEEECCCC-hHHHHHHHHHHHhcC--CEEEEeccCCHHHHHHHHHHCCEEEECCCCCCccHHHHHHHHCCCCE
Confidence 3 379999999653 336778888888873 9999 888888889999999999999999999999999999999999
Q ss_pred EEEecCCCcccccccccccccceeeeeecCCCHHHHHHHHHHHhc-CHHHHHHHHHHHHh
Q 011163 411 IAVTSSDIEFRHFAEFDHESTRFSRFISSTFGNISLSQALEEIKN-NPLSWKRKIKDAML 469 (492)
Q Consensus 411 V~~~~~~gg~~e~v~~~~~~~g~~G~~~~~~~~~~l~~ai~~~~~-~~~~~~~~~~~a~~ 469 (492)
|+++. ||+.|++ + +.+|+++++.|+++++++|..+++ |++.+++++++++.
T Consensus 143 I~~~~--~~~~e~~-~-----~~~g~~~~~~~~~~l~~~i~~l~~~~~~~~~~~~~~a~~ 194 (200)
T 2bfw_A 143 IASAV--GGLRDII-T-----NETGILVKAGDPGELANAILKALELSRSDLSKFRENCKK 194 (200)
T ss_dssp EEESC--HHHHHHC-C-----TTTCEEECTTCHHHHHHHHHHHHHCCHHHHHHHHHHHHH
T ss_pred EEeCC--CChHHHc-C-----CCceEEecCCCHHHHHHHHHHHHhcCHHHHHHHHHHHHH
Confidence 99999 9999998 3 456899999999999999999999 99999999998875
No 25
>3t5t_A Putative glycosyltransferase; GTB fold, pseudoglycosyltransferase; 1.70A {Streptomyces hygroscopicus} PDB: 4f97_A* 4f96_B* 4f9f_A* 3t7d_A*
Probab=99.95 E-value=3.8e-26 Score=229.98 Aligned_cols=305 Identities=14% Similarity=0.064 Sum_probs=207.5
Q ss_pred HHHHHHHHHHHcC--CCCCEEEEcCchhhhHHHHHHHHHhhcCCCCCcEEEEecCCCCCCCCCchhhhhcCCCccccCCC
Q 011163 123 FSRASLDYIVKSR--KQPDVLHIHNWETAIVGPLFWDIFVKQGLEGTRILLSCHNLNSLCLEHPDKLALCGLDPARLHRP 200 (492)
Q Consensus 123 ~~~~~~~~~~~~~--~~pDiVh~h~~~~~~~~~~~~~~~~~~~~~~~~~v~t~H~~~~~~~~~~~~~~~~~~~~~~~~~~ 200 (492)
.++...+.+...- ..-|+|.+|+++..++|.++++. ..+.++.+.+|.. +|...+. ..++..
T Consensus 133 vN~~fA~~i~~~~~~~~~D~VwVhDYhL~llp~~lR~~-----~~~~~igfFlHiP-----fPs~e~f-~~Lp~~----- 196 (496)
T 3t5t_A 133 FTRDFADAILKSSAQSADPVYLVHDYQLVGVPALLREQ-----RPDAPILLFVHIP-----WPSADYW-RILPKE----- 196 (496)
T ss_dssp HHHHHHHHHHHHTTTCSSCEEEEESGGGTTHHHHHHHH-----CTTSCEEEECCSC-----CCCHHHH-TTSCHH-----
T ss_pred HHHHHHHHHHHHhccCCCCEEEEeCccHhHHHHHHHhh-----CCCCeEEEEEcCC-----CCCHHHH-hhCcHh-----
Confidence 3444444444422 24689999999999999988654 3678999999964 2221110 011100
Q ss_pred CcccCCCCCccchhhHHHHhhcCceeccCccchhhhhhc---cc-CCCccH---HHh--hhcCCeeeecCCCCCCCcCCC
Q 011163 201 DRLQDNTKTHLVNILKGGVVYSNKVVIVSSMHSKGRIIR---SL-SHGLES---TLA--IHQDKLLVAPCGFDSSTWDPS 271 (492)
Q Consensus 201 ~~~~~~~~~~~~~~~~~~~~~ad~vi~vS~~~~~~~~~~---~~-~~~l~~---~~~--~~~~~~~vI~nGvd~~~f~p~ 271 (492)
....+..++-.+|.|..-++.+++..... .. |...+. .+. -...++.++|+|||.+.|.+.
T Consensus 197 ----------~r~ell~gll~~DligF~t~~y~~~Fl~~~~r~l~g~~~~~~~~~v~~~gr~v~v~viP~GID~~~f~~~ 266 (496)
T 3t5t_A 197 ----------IRTGILHGMLPATTIGFFADRWCRNFLESVADLLPDARIDREAMTVEWRGHRTRLRTMPLGYSPLTLDGR 266 (496)
T ss_dssp ----------HHHHHHHHHTTSSEEEESSHHHHHHHHHHHHHHCTTCEEETTTTEEEETTEEEEEEECCCCBCGGGC---
T ss_pred ----------HHHHHHHHHHhCCEEEEecHHHHHHHHHHHHHHhcCCcccccCCeEEECCEEEEEEEeccEeCHHHhchh
Confidence 01233456667888888888776653321 11 100000 000 012367899999999988765
Q ss_pred CCcccccccCccCccChHHHHHHHHHHhCCCCCCCceEEEEEeccccccCHHHHHHHHHHHhHc-----CcEEEEEecC-
Q 011163 272 NDKFLTENYCAEDMKGKTVCKVTLQQQLGLSKDASTIVVGCIFSDVSDVFLENLKAVVRGAKMR-----GIQFVFTGTN- 345 (492)
Q Consensus 272 ~~~~~~~~~~~~~~~~~~~~~~~~~~~lg~~~~~~~~~i~~~grl~~~Kg~~~li~a~~~l~~~-----~~~lvivG~g- 345 (492)
.. ..+.++++++| +.++|+++||+++.||++.+++|| ++.+. ++.|+++|..
T Consensus 267 ~~----------------~~~~~lr~~~~-----~~~lIl~VgRLd~~KGi~~lL~Af-~ll~~~P~~~~v~Lv~Vg~ps 324 (496)
T 3t5t_A 267 NP----------------QLPEGIEEWAD-----GHRLVVHSGRTDPIKNAERAVRAF-VLAARGGGLEKTRMLVRMNPN 324 (496)
T ss_dssp -C----------------CCCTTHHHHHT-----TSEEEEEEEESSGGGCHHHHHHHH-HHHHHTSSCTTEEEEEEEECC
T ss_pred hH----------------HHHHHHHHHhC-----CceEEEEcccCccccCHHHHHHHH-HHHHhCcccceEEEEEEECCC
Confidence 21 01245677776 247899999999999999999999 77642 3568888732
Q ss_pred -CC-h---hHHHHHHHHHHHhCC----CeEEEEeccCHHHHHHHHhcCCEEEECCCCCCCchHHHHHhhcC---CceEEE
Q 011163 346 -KL-P---SASRALVSFQEELKD----GIVIFVDSYDDALLHLIFSGSDIILCHSFHDPLLQVPLKALKYG---AAPIAV 413 (492)
Q Consensus 346 -~~-~---~~~~~l~~~~~~~~~----~~v~~~~~~~~~~~~~~~~~adi~v~pS~~E~~glv~lEAma~G---~PvV~~ 413 (492)
++ + ++.+++++++.+.+. ..|+|++..+.+++..+|+.||+|++||.+||||+|.+|||||| .|+|+|
T Consensus 325 r~~~~~y~~l~~~l~~lv~~in~~~g~~~V~f~g~v~~~el~aly~~ADv~vv~SlrEGfgLv~~EamA~~~~~g~lVlS 404 (496)
T 3t5t_A 325 RLYVPANADYVHRVETAVAEANAELGSDTVRIDNDNDVNHTIACFRRADLLIFNSTVDGQNLSTFEAPLVNERDADVILS 404 (496)
T ss_dssp CTTSHHHHHHHHHHHHHHHHHHHHHCTTSEEEEECCCHHHHHHHHHHCSEEEECCSSBSCCSHHHHHHHHCSSCCEEEEE
T ss_pred CCCchHHHHHHHHHHHHHHHhccccCCcCEEEeCCCCHHHHHHHHHhccEEEECcccccCChhHHHHHHhCCCCCCEEEe
Confidence 11 2 344566666665431 26898888888899999999999999999999999999999996 899999
Q ss_pred ecCCCcccccccccccccceeeeeecCCCHHHHHHHHHHHhcCH-HHHHHHHHHHHh--ccCCchhhHHHHHHHH
Q 011163 414 TSSDIEFRHFAEFDHESTRFSRFISSTFGNISLSQALEEIKNNP-LSWKRKIKDAML--QDFSWDADCNDIHISA 485 (492)
Q Consensus 414 ~~~~gg~~e~v~~~~~~~g~~G~~~~~~~~~~l~~ai~~~~~~~-~~~~~~~~~a~~--~~fsw~~~a~~~~~~~ 485 (492)
+. +|..+.+. .+|++++|.|+++++++|..+++++ +.++++.++.++ ..+++..-++.+ ++-
T Consensus 405 e~--aGa~~~l~-------~~allVnP~D~~~lA~AI~~aL~m~~~er~~r~~~~~~~V~~~d~~~W~~~f-l~~ 469 (496)
T 3t5t_A 405 ET--CGAAEVLG-------EYCRSVNPFDLVEQAEAISAALAAGPRQRAEAAARRRDAARPWTLEAWVQAQ-LDG 469 (496)
T ss_dssp TT--BTTHHHHG-------GGSEEECTTBHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHTTCBHHHHHHHH-HHH
T ss_pred CC--CCCHHHhC-------CCEEEECCCCHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHCCHHHHHHHH-HHH
Confidence 98 88888773 2479999999999999999999865 555666666554 778877777763 443
No 26
>1l5w_A Maltodextrin phosphorylase; enzymatic catalysis, substrate complex, trans; HET: GLC PLP; 1.80A {Escherichia coli} SCOP: c.87.1.4 PDB: 1l5v_A* 1l6i_A* 2asv_A* 2av6_A* 2aw3_A* 2azd_A* 1qm5_A* 1e4o_A* 2ecp_A* 1ahp_A*
Probab=99.95 E-value=3.7e-27 Score=244.74 Aligned_cols=351 Identities=15% Similarity=0.094 Sum_probs=252.9
Q ss_pred HHHHHHHHHH-HHHc-----CC----CCCEEEEcCchhhhHHH-HHHHHHhhcC--------CCCCcEEEEecCCCCCCC
Q 011163 121 TYFSRASLDY-IVKS-----RK----QPDVLHIHNWETAIVGP-LFWDIFVKQG--------LEGTRILLSCHNLNSLCL 181 (492)
Q Consensus 121 ~~~~~~~~~~-~~~~-----~~----~pDiVh~h~~~~~~~~~-~~~~~~~~~~--------~~~~~~v~t~H~~~~~~~ 181 (492)
.+|..+.++. +++. .. +||+||+|+||++++++ +++......+ .....+++|.|++.++|.
T Consensus 273 ~ff~~a~lq~ilr~~~~~~~~~~~l~~p~viHlNDtHpal~i~ElmR~l~d~~~~~~d~A~~i~~~~~vyT~HTl~~egl 352 (796)
T 1l5w_A 273 YFQCACSVADILRRHHLAGRKLHELADYEVIQLNDTHPTIAIPELLRVLIDEHQMSWDDAWAITSKTFAYTNHTLMPEAL 352 (796)
T ss_dssp HHHHHHHHHHHHHHHHHTTCCGGGHHHHEEEEEESSTTTTHHHHHHHHHHHHSCCCHHHHHHHHTTTEEEECCCCSGGGS
T ss_pred HHHHHHHHHHHHHHHHHcCCChhhcCCccEEEecCCccHhHHHHHHHHHhhhcCCCHHHHHHHhhccEEEEecCCcHhhh
Confidence 5666777765 3321 12 68999999999999877 4432210000 035689999999988875
Q ss_pred --CCchhhhh-c----------------------CCCccccCCCCcccCCCCCccchhhHHHHhhcCceeccCccchhhh
Q 011163 182 --EHPDKLAL-C----------------------GLDPARLHRPDRLQDNTKTHLVNILKGGVVYSNKVVIVSSMHSKGR 236 (492)
Q Consensus 182 --~~~~~~~~-~----------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ad~vi~vS~~~~~~~ 236 (492)
+|.+.+.. + +.+...+... .+... ..+++.+.++..|+.|.+||+.+++.+
T Consensus 353 e~wp~~l~~~~lpr~~~ii~~I~~~f~~~~~~~~~~~~~~~~~~-~i~~~---~~vnMa~lai~~S~~VNgVS~lH~e~i 428 (796)
T 1l5w_A 353 ERWDVKLVKGLLPRHMQIINEINTRFKTLVEKTWPGDEKVWAKL-AVVHD---KQVHMANLCVVGGFAVNGVAALHSDLV 428 (796)
T ss_dssp CEEEHHHHHHHCHHHHHHHHHHHHHHHHHHHHHSTTCHHHHHHH-CSEET---TEEEHHHHHHHHSSEEEESSHHHHHHH
T ss_pred hcCCHHHHHHHhHHHHHHHhccCHHHHHHHHHhcCCcHHHHhhh-hcccC---CcccHHHHHHHhcCccccccHHHHHHH
Confidence 44332211 0 0000000000 01111 247899999999999999999999988
Q ss_pred hhcccCCCccHHHhhhcCCeeeecCCCCCCCc----CCCCCcccccccC----------------ccC-------ccChH
Q 011163 237 IIRSLSHGLESTLAIHQDKLLVAPCGFDSSTW----DPSNDKFLTENYC----------------AED-------MKGKT 289 (492)
Q Consensus 237 ~~~~~~~~l~~~~~~~~~~~~vI~nGvd~~~f----~p~~~~~~~~~~~----------------~~~-------~~~~~ 289 (492)
....++ ..+...+.++.-|.|||+...| +|..+..+...+. +++ ++.|.
T Consensus 429 k~~~f~----~~~~~~p~k~~~iTNGI~~rrWl~~~NP~l~~li~~~~g~~w~~d~~~l~~l~~~~~d~~~~~~l~~~K~ 504 (796)
T 1l5w_A 429 VKDLFP----EYHQLWPNKFHNVTNGITPRRWIKQCNPALAALLDKSLQKEWANDLDQLINLEKFADDAKFRQQYREIKQ 504 (796)
T ss_dssp HHTTSH----HHHHHCGGGEEECCCCBCHHHHTTTTCHHHHHHHHHHCSSCCTTCGGGGGGGGGGGGCHHHHHHHHHHHH
T ss_pred HhHHhh----HHHHhCccccCCCcCCCcHHHhhcccCHhHHHHHHHhcCcccccCHHHHHHHHhcCCCHHHHHHHHHHHH
Confidence 765543 3455567899999999999888 6665555544444 333 24566
Q ss_pred HHHHH----HHHHhCCCCCCCceEEEEEeccccccCHHH-HHHHHHHHhH---------cCcEEEEEecCCChhHHHH--
Q 011163 290 VCKVT----LQQQLGLSKDASTIVVGCIFSDVSDVFLEN-LKAVVRGAKM---------RGIQFVFTGTNKLPSASRA-- 353 (492)
Q Consensus 290 ~~~~~----~~~~lg~~~~~~~~~i~~~grl~~~Kg~~~-li~a~~~l~~---------~~~~lvivG~g~~~~~~~~-- 353 (492)
.+|.. +++++|++.+++.++++++.|+..+||.++ ++.++.++.+ .+.++++.|.+ +|.+...
T Consensus 505 ~nK~~L~~~l~~~~Gl~vdpd~l~~~~vkRl~eYKRq~Lnil~ii~~~~~i~~~~~~~~~p~q~If~GKA-~P~y~~aK~ 583 (796)
T 1l5w_A 505 ANKVRLAEFVKVRTGIEINPQAIFDIQIKRLHEYKRQHLNLLHILALYKEIRENPQADRVPRVFLFGAKA-APGYYLAKN 583 (796)
T ss_dssp HHHHHHHHHHHHHHCCCCCTTSEEEEEESCCCGGGTHHHHHHHHHHHHHHHHTCTTCCCCCEEEEEECCC-CTTCHHHHH
T ss_pred HHHHHHHHHHHHHhCCCcCCCcceEeeeecchhhcccCEeHHHHHHHHHHHhcCCCCCCCCeEEEEEecC-ChhHHHHHH
Confidence 66776 588999998888999999999999999999 8998887765 46899999955 4445444
Q ss_pred ----HHHHHH------HhCCC--eEEEEeccCHHHHHHHHhcCCEEEECCC--CCCCchHHHHHhhcCCceEEEecCCCc
Q 011163 354 ----LVSFQE------ELKDG--IVIFVDSYDDALLHLIFSGSDIILCHSF--HDPLLQVPLKALKYGAAPIAVTSSDIE 419 (492)
Q Consensus 354 ----l~~~~~------~~~~~--~v~~~~~~~~~~~~~~~~~adi~v~pS~--~E~~glv~lEAma~G~PvV~~~~~~gg 419 (492)
+..+++ ..+ + +|.|+..|+....+.++++||++..||. +|++|++.|-||..|+++|++-. |.
T Consensus 584 iIk~i~~va~~in~Dp~~~-~~lKVvfl~nY~vslA~~I~~gaDv~l~~S~a~~EAsGTs~MKam~NGaL~iGtLD--Ga 660 (796)
T 1l5w_A 584 IIFAINKVADVINNDPLVG-DKLKVVFLPDYCVSAAEKLIPAADISEQISTAGKEASGTGNMKLALNGALTVGTLD--GA 660 (796)
T ss_dssp HHHHHHHHHHHHHTCTTTG-GGEEEEECSSCCHHHHHHHGGGCSEEEECCCTTTCCCCSHHHHHHHTTCEEEECSC--TT
T ss_pred HHHHHHHHHHHhccccccC-CceEEEEECCCCHHHHHHHhhhcceeecCCCCCCCCCchHHHHHHHcCCeeecCcC--Ce
Confidence 666665 332 5 8999999999999999999999999999 99999999999999999998888 88
Q ss_pred ccccccccccccceeeeeecCCCHHHHHH-------HHHHHhcCHHHHHHHHHHHHhccCCchhhHHHHHHHHHHHHh
Q 011163 420 FRHFAEFDHESTRFSRFISSTFGNISLSQ-------ALEEIKNNPLSWKRKIKDAMLQDFSWDADCNDIHISAYTAIK 490 (492)
Q Consensus 420 ~~e~v~~~~~~~g~~G~~~~~~~~~~l~~-------ai~~~~~~~~~~~~~~~~a~~~~fsw~~~a~~~~~~~Y~~l~ 490 (492)
..|+.+.. ..+|||+|.. +++++.+ +...+.++| .++++..+++...|||... .+ |..+|+++.
T Consensus 661 nvEi~e~v---G~~NgF~FG~-~~~ev~~l~~~~y~a~~~y~~~~-~~~~vvd~~~~g~fs~~~~-~~-y~~Ly~~L~ 731 (796)
T 1l5w_A 661 NVEIAEKV---GEENIFIFGH-TVEQVKAILAKGYDPVKWRKKDK-VLDAVLKELESGKYSDGDK-HA-FDQMLHSIG 731 (796)
T ss_dssp HHHHHHHH---CGGGSEECSC-CHHHHHHHHHHCCCHHHHHHHCH-HHHHHHHHHHHTTTTTTCT-TT-THHHHHHTS
T ss_pred eeehhhcc---CCCcEEEecC-CHHHHHHHHHcccCHHHHhhcCH-HHHHHHHHHHcCCCCCCcH-HH-HHHHHHHHh
Confidence 88875431 1358999977 6666552 333444566 5778888888899999886 67 589999873
No 27
>3qhp_A Type 1 capsular polysaccharide biosynthesis prote (CAPJ); rossmann fold, glycosyltransferase, transferase; 1.50A {Helicobacter pylori}
Probab=99.94 E-value=9.5e-27 Score=204.09 Aligned_cols=159 Identities=14% Similarity=0.102 Sum_probs=134.2
Q ss_pred eEEEEEeccccccCHHHHHHHHHHHhH-cCcEEEEEecCCChhHHHHHHHHHHHhCCCeEEEEeccCHHHHHHHHhcCCE
Q 011163 308 IVVGCIFSDVSDVFLENLKAVVRGAKM-RGIQFVFTGTNKLPSASRALVSFQEELKDGIVIFVDSYDDALLHLIFSGSDI 386 (492)
Q Consensus 308 ~~i~~~grl~~~Kg~~~li~a~~~l~~-~~~~lvivG~g~~~~~~~~l~~~~~~~~~~~v~~~~~~~~~~~~~~~~~adi 386 (492)
++|+++||+.++||++.+++|+..+.+ .+++|+|+|+|+ ..+.+++++++++ .++.+ +..+.+++..+|+.||+
T Consensus 3 ~~i~~~G~~~~~Kg~~~li~a~~~l~~~~~~~l~i~G~g~---~~~~~~~~~~~~~-~~v~~-g~~~~~~~~~~~~~adv 77 (166)
T 3qhp_A 3 FKIAMVGRYSNEKNQSVLIKAVALSKYKQDIVLLLKGKGP---DEKKIKLLAQKLG-VKAEF-GFVNSNELLEILKTCTL 77 (166)
T ss_dssp EEEEEESCCSTTTTHHHHHHHHHTCTTGGGEEEEEECCST---THHHHHHHHHHHT-CEEEC-CCCCHHHHHHHHTTCSE
T ss_pred eEEEEEeccchhcCHHHHHHHHHHhccCCCeEEEEEeCCc---cHHHHHHHHHHcC-CeEEE-eecCHHHHHHHHHhCCE
Confidence 689999999999999999999999864 479999999764 3567888888875 48888 88888899999999999
Q ss_pred EEECCCCCCCchHHHHHhhcCC-ceEEE-ecCCCcccccccccccccceeeeeecCCCHHHHHHHHHHHhcCHHHHHHHH
Q 011163 387 ILCHSFHDPLLQVPLKALKYGA-APIAV-TSSDIEFRHFAEFDHESTRFSRFISSTFGNISLSQALEEIKNNPLSWKRKI 464 (492)
Q Consensus 387 ~v~pS~~E~~glv~lEAma~G~-PvV~~-~~~~gg~~e~v~~~~~~~g~~G~~~~~~~~~~l~~ai~~~~~~~~~~~~~~ 464 (492)
+++||.+|+||++++|||+||+ |+|++ +. ||..|++.+ + +.++++.|+++++++|..+++|++.+++++
T Consensus 78 ~v~ps~~e~~~~~~~Eama~G~vPvi~~~~~--~~~~~~~~~-----~--~~~~~~~~~~~l~~~i~~l~~~~~~~~~~~ 148 (166)
T 3qhp_A 78 YVHAANVESEAIACLEAISVGIVPVIANSPL--SATRQFALD-----E--RSLFEPNNAKDLSAKIDWWLENKLERERMQ 148 (166)
T ss_dssp EEECCCSCCCCHHHHHHHHTTCCEEEECCTT--CGGGGGCSS-----G--GGEECTTCHHHHHHHHHHHHHCHHHHHHHH
T ss_pred EEECCcccCccHHHHHHHhcCCCcEEeeCCC--CchhhhccC-----C--ceEEcCCCHHHHHHHHHHHHhCHHHHHHHH
Confidence 9999999999999999999998 99994 46 888898863 2 358889999999999999999999999999
Q ss_pred HHHHh--ccCCchhhHHH
Q 011163 465 KDAML--QDFSWDADCND 480 (492)
Q Consensus 465 ~~a~~--~~fsw~~~a~~ 480 (492)
++++. ++|||+.++++
T Consensus 149 ~~~~~~~~~~s~~~~~~~ 166 (166)
T 3qhp_A 149 NEYAKSALNYTLENSVIQ 166 (166)
T ss_dssp HHHHHHHHHHC-------
T ss_pred HHHHHHHHHCChhhhhcC
Confidence 98876 78999998864
No 28
>1v4v_A UDP-N-acetylglucosamine 2-epimerase; UDP-GLCNAC, two domains, homodimer, riken structural genomics/proteomics initiative, RSGI; HET: MSE; 1.80A {Thermus thermophilus} SCOP: c.87.1.3
Probab=99.94 E-value=8e-25 Score=217.95 Aligned_cols=218 Identities=11% Similarity=0.057 Sum_probs=157.2
Q ss_pred HHhhcCceeccCccchhhhhhcccCCCccHHHhhhcCCeeeecCCC-CCCCcCCCCCcccccccCccCccChHHHHHHHH
Q 011163 218 GVVYSNKVVIVSSMHSKGRIIRSLSHGLESTLAIHQDKLLVAPCGF-DSSTWDPSNDKFLTENYCAEDMKGKTVCKVTLQ 296 (492)
Q Consensus 218 ~~~~ad~vi~vS~~~~~~~~~~~~~~~l~~~~~~~~~~~~vI~nGv-d~~~f~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 296 (492)
..+.+|.++++|+..++.+.. .|. +++++.+++|++ |...+.+ .+..++
T Consensus 143 ~~~~~~~~~~~s~~~~~~l~~--~g~--------~~~ki~vi~n~~~d~~~~~~--------------------~~~~~~ 192 (376)
T 1v4v_A 143 TDVLTDLDFAPTPLAKANLLK--EGK--------REEGILVTGQTGVDAVLLAA--------------------KLGRLP 192 (376)
T ss_dssp HHHHCSEEEESSHHHHHHHHT--TTC--------CGGGEEECCCHHHHHHHHHH--------------------HHCCCC
T ss_pred HHHHhceeeCCCHHHHHHHHH--cCC--------CcceEEEECCchHHHHhhhh--------------------hhhHHH
Confidence 345689999999987776654 221 356789999964 4211100 000111
Q ss_pred HHhCCCCCCCceEEEEEeccccccCHHHHHHHHHHHhH--cCcEEEEE-ecCCChhHHHHHHHHHHHhCCCeEEEEeccC
Q 011163 297 QQLGLSKDASTIVVGCIFSDVSDVFLENLKAVVRGAKM--RGIQFVFT-GTNKLPSASRALVSFQEELKDGIVIFVDSYD 373 (492)
Q Consensus 297 ~~lg~~~~~~~~~i~~~grl~~~Kg~~~li~a~~~l~~--~~~~lviv-G~g~~~~~~~~l~~~~~~~~~~~v~~~~~~~ 373 (492)
++++ ++..+++++||+...||++.+++|++++.+ .+++++++ |++ +...+.+++++.. .++|+|++...
T Consensus 193 ~~~~----~~~~vl~~~gr~~~~k~~~~ll~a~~~l~~~~~~~~lv~~~g~~--~~~~~~l~~~~~~--~~~v~~~g~~g 264 (376)
T 1v4v_A 193 EGLP----EGPYVTVTMHRRENWPLLSDLAQALKRVAEAFPHLTFVYPVHLN--PVVREAVFPVLKG--VRNFVLLDPLE 264 (376)
T ss_dssp TTCC----SSCEEEECCCCGGGGGGHHHHHHHHHHHHHHCTTSEEEEECCSC--HHHHHHHHHHHTT--CTTEEEECCCC
T ss_pred HhcC----CCCEEEEEeCcccchHHHHHHHHHHHHHHhhCCCeEEEEECCCC--HHHHHHHHHHhcc--CCCEEEECCCC
Confidence 1221 233567789999888899999999999875 37888886 533 3345666666543 26899987766
Q ss_pred HHHHHHHHhcCCEEEECCCCCCCchHHHHHhhcCCceEEEe-cCCCcccccccccccccceeeeeecCCCHHHHHHHHHH
Q 011163 374 DALLHLIFSGSDIILCHSFHDPLLQVPLKALKYGAAPIAVT-SSDIEFRHFAEFDHESTRFSRFISSTFGNISLSQALEE 452 (492)
Q Consensus 374 ~~~~~~~~~~adi~v~pS~~E~~glv~lEAma~G~PvV~~~-~~~gg~~e~v~~~~~~~g~~G~~~~~~~~~~l~~ai~~ 452 (492)
..++..+|+.||++|+|| | |+ ++|||+||+|+|+++ . ||..++++ +++|++++ .|+++|+++|.+
T Consensus 265 ~~~~~~~~~~ad~~v~~S--~--g~-~lEA~a~G~PvI~~~~~--~~~~~~~~------~g~g~lv~-~d~~~la~~i~~ 330 (376)
T 1v4v_A 265 YGSMAALMRASLLLVTDS--G--GL-QEEGAALGVPVVVLRNV--TERPEGLK------AGILKLAG-TDPEGVYRVVKG 330 (376)
T ss_dssp HHHHHHHHHTEEEEEESC--H--HH-HHHHHHTTCCEEECSSS--CSCHHHHH------HTSEEECC-SCHHHHHHHHHH
T ss_pred HHHHHHHHHhCcEEEECC--c--CH-HHHHHHcCCCEEeccCC--Ccchhhhc------CCceEECC-CCHHHHHHHHHH
Confidence 667889999999999999 3 55 789999999999974 5 88888764 23689886 599999999999
Q ss_pred HhcCHHHHHHHHHHHHhccCCchhhHHHHHHHHHHHHh
Q 011163 453 IKNNPLSWKRKIKDAMLQDFSWDADCNDIHISAYTAIK 490 (492)
Q Consensus 453 ~~~~~~~~~~~~~~a~~~~fsw~~~a~~~~~~~Y~~l~ 490 (492)
+++|++.+++|++++ +.|+|...++++ .+++.++.
T Consensus 331 ll~d~~~~~~~~~~~--~~~~~~~~~~~i-~~~i~~~~ 365 (376)
T 1v4v_A 331 LLENPEELSRMRKAK--NPYGDGKAGLMV-ARGVAWRL 365 (376)
T ss_dssp HHTCHHHHHHHHHSC--CSSCCSCHHHHH-HHHHHHHT
T ss_pred HHhChHhhhhhcccC--CCCCCChHHHHH-HHHHHHHh
Confidence 999999999998643 668888888885 77777653
No 29
>2gj4_A Glycogen phosphorylase, muscle form; transferase; HET: PLR 2TH; 1.60A {Oryctolagus cuniculus} SCOP: c.87.1.4 PDB: 2gm9_A* 1abb_A* 3nc4_A* 3l79_A* 2pyd_A* 2pyi_A* 3l7a_A* 3l7b_A* 3l7c_A* 3l7d_A* 2qnb_A* 1c8l_A* 1axr_A* 1gpy_A* 1e1y_A* 1lwo_A* 1pyg_A* 1uzu_A* 1lwn_A* 1xkx_A* ...
Probab=99.93 E-value=3.9e-25 Score=230.48 Aligned_cols=339 Identities=15% Similarity=0.105 Sum_probs=238.4
Q ss_pred CCCEEEEcCchhhhHHH-HHHHHHhhcCC--------CCCcEEEEecCCCCCCC--CCchhhhh-c--------------
Q 011163 137 QPDVLHIHNWETAIVGP-LFWDIFVKQGL--------EGTRILLSCHNLNSLCL--EHPDKLAL-C-------------- 190 (492)
Q Consensus 137 ~pDiVh~h~~~~~~~~~-~~~~~~~~~~~--------~~~~~v~t~H~~~~~~~--~~~~~~~~-~-------------- 190 (492)
+||+||+|+||++++++ +++......++ ....+++|.|++.++|. ++.+.+.. +
T Consensus 320 ~p~viHlNDtHpal~i~ElmR~l~d~~~l~~d~A~~i~~~~~vfT~HTl~~eglE~wp~~l~~~lLPr~~~ii~~in~~f 399 (824)
T 2gj4_A 320 DKVAIQLNDTHPSLAIPELMRVLVDLERLDWDKAWEVTVKTCAYTNHTVLPEALERWPVHLLETLLPRHLQIIYEINQRF 399 (824)
T ss_dssp HHEEEEEESSTTTTHHHHHHHHHHHTSCCCHHHHHHHHHHHEEEECCCCCGGGSCEEEHHHHHHHCHHHHHHHHHHHHHH
T ss_pred CCcEEEccCCchHhHHHHHHHHHHHhcCCCHHHHHHHhcCcEEEEeCCChHHHhhhchHHHHHHhCchHHHHHHHHHHHH
Confidence 47899999999999877 44322100000 12359999999998887 65543322 1
Q ss_pred --------CCCccccCCCCcccCCCCCccchhhHHHHhhcCceeccCccchhhhhhcccCCCccHHHhhhcCCeeeecCC
Q 011163 191 --------GLDPARLHRPDRLQDNTKTHLVNILKGGVVYSNKVVIVSSMHSKGRIIRSLSHGLESTLAIHQDKLLVAPCG 262 (492)
Q Consensus 191 --------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ad~vi~vS~~~~~~~~~~~~~~~l~~~~~~~~~~~~vI~nG 262 (492)
..+...+...+.++. +....+++.+.++..|+.|.+||+.+++.+.+..++ ..+...+.++.-|.||
T Consensus 400 ~~~~~~~~~~~~~~~~~~~~i~~-~~~~~vnMa~lai~~S~~VNgVS~lH~e~ik~~~f~----~~~~~~p~k~~~iTNG 474 (824)
T 2gj4_A 400 LNRVAAAFPGDVDRLRRMSLVEE-GAVKRINMAHLCIAGSHAVNGVARIHSEILKKTIFK----DFYELEPHKFQNKTNG 474 (824)
T ss_dssp HHHHHHHSTTCHHHHHHHCSEEC-SSSCEEEHHHHHHHTCSCEEESSHHHHHHHHHTTTH----HHHHHCGGGEEECCCC
T ss_pred HHHHHHHcCCcHHHHHhhhhhhh-cCCCcccHHHHHHHhcCceeeEcHHHHHHHhhHHhH----HHHHcChhhcccccCC
Confidence 000000000011110 011357899999999999999999999988765554 2444567899999999
Q ss_pred CCCCCc----CCCCCcccccc-----------------cCc-cCc-----cChHHHHHH----HHHHhCCCCCCCceEEE
Q 011163 263 FDSSTW----DPSNDKFLTEN-----------------YCA-EDM-----KGKTVCKVT----LQQQLGLSKDASTIVVG 311 (492)
Q Consensus 263 vd~~~f----~p~~~~~~~~~-----------------~~~-~~~-----~~~~~~~~~----~~~~lg~~~~~~~~~i~ 311 (492)
|+...| +|..+..+... |.. .++ +.|..+|.. +++++|++.+++.++++
T Consensus 475 I~~rrWl~~~NP~l~~lI~~~ig~~W~~~~~~l~~L~~y~~d~~~~~~~~~~K~~nK~~la~~l~~~~Gl~vdpd~l~~g 554 (824)
T 2gj4_A 475 ITPRRWLVLCNPGLAEIIAERIGEEYISDLDQLRKLLSYVDDEAFIRDVAKVKQENKLKFAAYLEREYKVHINPNSLFDV 554 (824)
T ss_dssp BCTCCCCCCTCHHHHHHHHHHHCSGGGGCGGGGGGGGGGTTCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCTTSEEEE
T ss_pred cChhhhcccCCHhHHHHHHHhcCchhhhCHHHHHHHHhccchHHHHHHHHHHHHHHHHHHHHHHHHHhCCCcCCCcceEe
Confidence 999999 66544333322 332 223 344556665 78889999888899999
Q ss_pred EEeccccccCHHHH-HHHHHHHh---Hc------CcEEEEEecCCChhHHHH------HHHHHHHhC-----CC--eEEE
Q 011163 312 CIFSDVSDVFLENL-KAVVRGAK---MR------GIQFVFTGTNKLPSASRA------LVSFQEELK-----DG--IVIF 368 (492)
Q Consensus 312 ~~grl~~~Kg~~~l-i~a~~~l~---~~------~~~lvivG~g~~~~~~~~------l~~~~~~~~-----~~--~v~~ 368 (492)
++.|+..+||.+++ +.++.++. +. +.++++.|.+ +|.+... +..+++.++ .+ +|.|
T Consensus 555 ~vkRl~eYKRq~L~~l~~i~~~~~i~~~~~~~~~p~q~If~GKA-~P~y~~aK~iIkli~~va~~in~Dp~v~~~lKVvF 633 (824)
T 2gj4_A 555 QVKRIHEYKRQLLNCLHVITLYNRIKKEPNKFVVPRTVMIGGKA-APGYHMAKMIIKLITAIGDVVNHDPVVGDRLRVIF 633 (824)
T ss_dssp EESCCCGGGTHHHHHHHHHHHHHHHHHCTTSCCCCEEEEEECCC-CTTCHHHHHHHHHHHHHHHHHTTCTTTGGGEEEEE
T ss_pred eeecchhhcchhhHHHHHHHHHHHHHhCCCCCCCCEEEEEEEeC-CHhHHHHHHHHHHHHHHHHHhccCcccCCceEEEE
Confidence 99999999999998 88887774 22 4689999954 4445544 666666552 15 8999
Q ss_pred EeccCHHHHHHHHhcCCEEEECCC--CCCCchHHHHHhhcCCceEEEecCCCcccccccccccccceeeeeecCCCHHHH
Q 011163 369 VDSYDDALLHLIFSGSDIILCHSF--HDPLLQVPLKALKYGAAPIAVTSSDIEFRHFAEFDHESTRFSRFISSTFGNISL 446 (492)
Q Consensus 369 ~~~~~~~~~~~~~~~adi~v~pS~--~E~~glv~lEAma~G~PvV~~~~~~gg~~e~v~~~~~~~g~~G~~~~~~~~~~l 446 (492)
+..|+....+.++++||+++.||. +|++|++.|-||..|+++|++-. |+-.|+.+.- ..+|||+|... ++++
T Consensus 634 l~nYdvslA~~I~~gaDv~l~~S~ag~EAsGTs~MKamlNGaLtigtlD--GanvEi~e~v---G~~Ngf~FG~~-~~ev 707 (824)
T 2gj4_A 634 LENYRVSLAEKVIPAADLSEQISTAGTEASGTGNMKFMLNGALTIGTMD--GANVEMAEEA---GEENFFIFGMR-VEDV 707 (824)
T ss_dssp ETTCCHHHHHHHGGGCSEEEECCCTTSCSCCSHHHHHHHTTCEEEECSC--TTHHHHHHHH---CGGGSEECSCC-HHHH
T ss_pred ECCCCHHHHHHHhhhcceeecCCCCCCCCCchHHHHHHHcCceEEEEec--Cccchhhhcc---CCCCEEEeCCc-HHHH
Confidence 999999999999999999999999 99999999999999999999887 8777764321 23579999865 5555
Q ss_pred HHHHH-------HHhcCHHHHHHHHHHHHhccCCchhhHHHHHHHHHHHHh
Q 011163 447 SQALE-------EIKNNPLSWKRKIKDAMLQDFSWDADCNDIHISAYTAIK 490 (492)
Q Consensus 447 ~~ai~-------~~~~~~~~~~~~~~~a~~~~fsw~~~a~~~~~~~Y~~l~ 490 (492)
++++ .+.++...++++..+.+...|+|... .+ |..+|+++.
T Consensus 708 -~~l~~~~~~a~~~Y~~~~~l~~v~d~i~~g~fs~~~~-~~-y~~ly~~l~ 755 (824)
T 2gj4_A 708 -DRLDQRGYNAQEYYDRIPELRQIIEQLSSGFFSPKQP-DL-FKDIVNMLM 755 (824)
T ss_dssp -HHHHHHCCCHHHHHHHCHHHHHHHHHHHHTTTCTTST-TT-THHHHHHHH
T ss_pred -HHHHHcCCCHHHHhcCCHHHHHHHHHHHhCCCCCCCh-HH-HHHHHHHHH
Confidence 4432 12333345667777777789999987 67 588998873
No 30
>2f9f_A First mannosyl transferase (WBAZ-1); alpha-beta protein, structural genomics, PSI, protein struct initiative; 1.80A {Archaeoglobus fulgidus} SCOP: c.87.1.8
Probab=99.91 E-value=2e-23 Score=184.96 Aligned_cols=148 Identities=15% Similarity=0.119 Sum_probs=125.8
Q ss_pred ceEEEEEeccccccCHHHHHHHHHHHhHcCcEEEEEecCCChhHHHHHHHHHH--HhC-CCeEEEEeccCHHHHHHHHhc
Q 011163 307 TIVVGCIFSDVSDVFLENLKAVVRGAKMRGIQFVFTGTNKLPSASRALVSFQE--ELK-DGIVIFVDSYDDALLHLIFSG 383 (492)
Q Consensus 307 ~~~i~~~grl~~~Kg~~~li~a~~~l~~~~~~lvivG~g~~~~~~~~l~~~~~--~~~-~~~v~~~~~~~~~~~~~~~~~ 383 (492)
.++|+|+||+.+.||++.+++|++++ .+++|+|+|.|++. +.++++++ .++ .++|.+++.++.+++..+|+.
T Consensus 23 ~~~i~~~G~~~~~Kg~~~li~a~~~l--~~~~l~i~G~~~~~---~~l~~~~~~~~~~l~~~v~~~g~~~~~e~~~~~~~ 97 (177)
T 2f9f_A 23 GDFWLSVNRIYPEKRIELQLEVFKKL--QDEKLYIVGWFSKG---DHAERYARKIMKIAPDNVKFLGSVSEEELIDLYSR 97 (177)
T ss_dssp CSCEEEECCSSGGGTHHHHHHHHHHC--TTSCEEEEBCCCTT---STHHHHHHHHHHHSCTTEEEEESCCHHHHHHHHHH
T ss_pred CCEEEEEeccccccCHHHHHHHHHhC--CCcEEEEEecCccH---HHHHHHHHhhhcccCCcEEEeCCCCHHHHHHHHHh
Confidence 46789999999999999999999988 47999999977532 23444444 322 379999999999999999999
Q ss_pred CCEEEECCCCCCCchHHHHHhhcCCceEEEecCCCcccccccccccccceeeeeecCCCHHHHHHHHHHHhcCHHH-HHH
Q 011163 384 SDIILCHSFHDPLLQVPLKALKYGAAPIAVTSSDIEFRHFAEFDHESTRFSRFISSTFGNISLSQALEEIKNNPLS-WKR 462 (492)
Q Consensus 384 adi~v~pS~~E~~glv~lEAma~G~PvV~~~~~~gg~~e~v~~~~~~~g~~G~~~~~~~~~~l~~ai~~~~~~~~~-~~~ 462 (492)
||++++||..|+||++++|||+||+|+|+++. |+..|++.+ +.+|+++ +.|+++++++|..+++|++. +++
T Consensus 98 adi~v~ps~~e~~~~~~~Eama~G~PvI~~~~--~~~~e~i~~-----~~~g~~~-~~d~~~l~~~i~~l~~~~~~~~~~ 169 (177)
T 2f9f_A 98 CKGLLCTAKDEDFGLTPIEAMASGKPVIAVNE--GGFKETVIN-----EKTGYLV-NADVNEIIDAMKKVSKNPDKFKKD 169 (177)
T ss_dssp CSEEEECCSSCCSCHHHHHHHHTTCCEEEESS--HHHHHHCCB-----TTTEEEE-CSCHHHHHHHHHHHHHCTTTTHHH
T ss_pred CCEEEeCCCcCCCChHHHHHHHcCCcEEEeCC--CCHHHHhcC-----CCccEEe-CCCHHHHHHHHHHHHhCHHHHHHH
Confidence 99999999999999999999999999999999 999999873 5578999 99999999999999998886 455
Q ss_pred HHHHH
Q 011163 463 KIKDA 467 (492)
Q Consensus 463 ~~~~a 467 (492)
+++++
T Consensus 170 ~~~~a 174 (177)
T 2f9f_A 170 CFRRA 174 (177)
T ss_dssp HHHHH
T ss_pred HHHHH
Confidence 55544
No 31
>2xci_A KDO-transferase, 3-deoxy-D-manno-2-octulosonic acid transferase; KDTA, GSEA, glycosyltransferase superfamily B,; HET: PG4; 2.00A {Aquifex aeolicus} PDB: 2xcu_A*
Probab=99.90 E-value=6.8e-23 Score=203.52 Aligned_cols=200 Identities=10% Similarity=-0.022 Sum_probs=146.4
Q ss_pred hhHHHHhhcCceeccCccchhhhhhcccCCCccHHHhhhcCCeeeecCCCCCCCcCCCCCcccccccCccCccChHHHHH
Q 011163 214 ILKGGVVYSNKVVIVSSMHSKGRIIRSLSHGLESTLAIHQDKLLVAPCGFDSSTWDPSNDKFLTENYCAEDMKGKTVCKV 293 (492)
Q Consensus 214 ~~~~~~~~ad~vi~vS~~~~~~~~~~~~~~~l~~~~~~~~~~~~vI~nGvd~~~f~p~~~~~~~~~~~~~~~~~~~~~~~ 293 (492)
+.+..++.+|.++++|+..++.+.. .| .+ ++.+|+|+. |.+....
T Consensus 146 ~~~~~~~~~d~ii~~S~~~~~~l~~--~g---------~~-ki~vi~n~~----f~~~~~~------------------- 190 (374)
T 2xci_A 146 IEKILSKKFDLIIMRTQEDVEKFKT--FG---------AK-RVFSCGNLK----FICQKGK------------------- 190 (374)
T ss_dssp HHHHHHTTCSEEEESCHHHHHHHHT--TT---------CC-SEEECCCGG----GCCCCCS-------------------
T ss_pred HHHHHHHhCCEEEECCHHHHHHHHH--cC---------CC-eEEEcCCCc----cCCCcCh-------------------
Confidence 3456678899999999998877654 23 13 899999973 2221100
Q ss_pred HHHHHhCCCCCCCceEEEEEeccccccCHHHHHHHHHHHhHc--CcEEEEEecCCChhHHHHHHHHHHHhCCC-------
Q 011163 294 TLQQQLGLSKDASTIVVGCIFSDVSDVFLENLKAVVRGAKMR--GIQFVFTGTNKLPSASRALVSFQEELKDG------- 364 (492)
Q Consensus 294 ~~~~~lg~~~~~~~~~i~~~grl~~~Kg~~~li~a~~~l~~~--~~~lvivG~g~~~~~~~~l~~~~~~~~~~------- 364 (492)
++. + ..+++++.|+ ..||++.|++|++++.+. +++|+|+|+|+ +..+.+++++++++..
T Consensus 191 --~~~--l----~~~vi~~~~~--~~k~~~~ll~A~~~l~~~~p~~~lvivG~g~--~~~~~l~~~~~~~gl~~~~~~~~ 258 (374)
T 2xci_A 191 --GIK--L----KGEFIVAGSI--HTGEVEIILKAFKEIKKTYSSLKLILVPRHI--ENAKIFEKKARDFGFKTSFFENL 258 (374)
T ss_dssp --CCC--C----SSCEEEEEEE--CGGGHHHHHHHHHHHHTTCTTCEEEEEESSG--GGHHHHHHHHHHTTCCEEETTCC
T ss_pred --hhh--h----cCCEEEEEeC--CCchHHHHHHHHHHHHhhCCCcEEEEECCCH--HHHHHHHHHHHHCCCceEEecCC
Confidence 000 0 1145666665 358999999999999753 79999999764 3335677777776422
Q ss_pred --eEEEEeccCHHHHHHHHhcCCEEEECCCC-CCCchHHHHHhhcCCceEEE-ecCCCcccccccccccccceeeeeecC
Q 011163 365 --IVIFVDSYDDALLHLIFSGSDIILCHSFH-DPLLQVPLKALKYGAAPIAV-TSSDIEFRHFAEFDHESTRFSRFISST 440 (492)
Q Consensus 365 --~v~~~~~~~~~~~~~~~~~adi~v~pS~~-E~~glv~lEAma~G~PvV~~-~~~~gg~~e~v~~~~~~~g~~G~~~~~ 440 (492)
+|.+. +.. +++..+|+.||++++||.+ |++|++++||||||+|||++ ++ +|.+|++++. ..+|+++++
T Consensus 259 ~~~v~~~-~~~-~dl~~~y~~aDv~vl~ss~~e~gg~~~lEAmA~G~PVI~~~~~--~~~~e~~~~~----~~~G~l~~~ 330 (374)
T 2xci_A 259 EGDVILV-DRF-GILKELYPVGKIAIVGGTFVNIGGHNLLEPTCWGIPVIYGPYT--HKVNDLKEFL----EKEGAGFEV 330 (374)
T ss_dssp CSSEEEC-CSS-SCHHHHGGGEEEEEECSSSSSSCCCCCHHHHTTTCCEEECSCC--TTSHHHHHHH----HHTTCEEEC
T ss_pred CCcEEEE-CCH-HHHHHHHHhCCEEEECCcccCCCCcCHHHHHHhCCCEEECCCc--cChHHHHHHH----HHCCCEEEe
Confidence 45544 332 3467999999999888754 77899999999999999975 66 8899987531 135788889
Q ss_pred CCHHHHHHHHHHHhcCHHHHHHHHHHHHh
Q 011163 441 FGNISLSQALEEIKNNPLSWKRKIKDAML 469 (492)
Q Consensus 441 ~~~~~l~~ai~~~~~~~~~~~~~~~~a~~ 469 (492)
.|+++|+++|..+++| +.+++|+++|++
T Consensus 331 ~d~~~La~ai~~ll~d-~~r~~mg~~ar~ 358 (374)
T 2xci_A 331 KNETELVTKLTELLSV-KKEIKVEEKSRE 358 (374)
T ss_dssp CSHHHHHHHHHHHHHS-CCCCCHHHHHHH
T ss_pred CCHHHHHHHHHHHHhH-HHHHHHHHHHHH
Confidence 9999999999999999 988999998874
No 32
>3otg_A CALG1; calicheamicin, TDP, structural genomics, PSI-2, protein STRU initiative, center for eukaryotic structural genomics, CESG fold; HET: TYD; 2.08A {Micromonospora echinospora} PDB: 3oth_A*
Probab=99.86 E-value=1.1e-20 Score=190.29 Aligned_cols=160 Identities=13% Similarity=-0.038 Sum_probs=121.2
Q ss_pred CceEEEEEeccccccCHHHHHHHHHHHhHcCcEEEEEecCCChhHHHHHHHHHHHhCCCeEEEEeccCHHHHHHHHhcCC
Q 011163 306 STIVVGCIFSDVSDVFLENLKAVVRGAKMRGIQFVFTGTNKLPSASRALVSFQEELKDGIVIFVDSYDDALLHLIFSGSD 385 (492)
Q Consensus 306 ~~~~i~~~grl~~~Kg~~~li~a~~~l~~~~~~lvivG~g~~~~~~~~l~~~~~~~~~~~v~~~~~~~~~~~~~~~~~ad 385 (492)
...++++.|++. .++.+.+.++++.+.+.+.+++++++++. ..+.++ .+ .++|.+.+..+ ...+|+.||
T Consensus 242 ~~~vlv~~G~~~-~~~~~~~~~~~~~l~~~~~~~~~~~g~~~--~~~~l~----~~-~~~v~~~~~~~---~~~~l~~ad 310 (412)
T 3otg_A 242 RPLVYLTLGTSS-GGTVEVLRAAIDGLAGLDADVLVASGPSL--DVSGLG----EV-PANVRLESWVP---QAALLPHVD 310 (412)
T ss_dssp SCEEEEECTTTT-CSCHHHHHHHHHHHHTSSSEEEEECCSSC--CCTTCC----CC-CTTEEEESCCC---HHHHGGGCS
T ss_pred CCEEEEEcCCCC-cCcHHHHHHHHHHHHcCCCEEEEEECCCC--Chhhhc----cC-CCcEEEeCCCC---HHHHHhcCc
Confidence 346778889986 77888888888888766788888874422 111121 12 36899887663 568899999
Q ss_pred EEEECCCCCCCchHHHHHhhcCCceEEEecCCCc----ccccccccccccceeeeeecCC--CHHHHHHHHHHHhcCHHH
Q 011163 386 IILCHSFHDPLLQVPLKALKYGAAPIAVTSSDIE----FRHFAEFDHESTRFSRFISSTF--GNISLSQALEEIKNNPLS 459 (492)
Q Consensus 386 i~v~pS~~E~~glv~lEAma~G~PvV~~~~~~gg----~~e~v~~~~~~~g~~G~~~~~~--~~~~l~~ai~~~~~~~~~ 459 (492)
++|.+|- +.+++|||++|+|+|+... ++ ..+.+. ++++|+++++. |+++|+++|.++++|++.
T Consensus 311 ~~v~~~g----~~t~~Ea~a~G~P~v~~p~--~~~q~~~~~~v~-----~~g~g~~~~~~~~~~~~l~~ai~~ll~~~~~ 379 (412)
T 3otg_A 311 LVVHHGG----SGTTLGALGAGVPQLSFPW--AGDSFANAQAVA-----QAGAGDHLLPDNISPDSVSGAAKRLLAEESY 379 (412)
T ss_dssp EEEESCC----HHHHHHHHHHTCCEEECCC--STTHHHHHHHHH-----HHTSEEECCGGGCCHHHHHHHHHHHHHCHHH
T ss_pred EEEECCc----hHHHHHHHHhCCCEEecCC--chhHHHHHHHHH-----HcCCEEecCcccCCHHHHHHHHHHHHhCHHH
Confidence 9998863 4789999999999999765 43 445554 24568999887 899999999999999999
Q ss_pred HHHHHHHHHh--ccCCchhhHHHHHHHHHHH
Q 011163 460 WKRKIKDAML--QDFSWDADCNDIHISAYTA 488 (492)
Q Consensus 460 ~~~~~~~a~~--~~fsw~~~a~~~~~~~Y~~ 488 (492)
++++++.+.. +.++|+.+++.+ +++|.+
T Consensus 380 ~~~~~~~~~~~~~~~~~~~~~~~~-~~l~~~ 409 (412)
T 3otg_A 380 RAGARAVAAEIAAMPGPDEVVRLL-PGFASR 409 (412)
T ss_dssp HHHHHHHHHHHHHSCCHHHHHTTH-HHHHC-
T ss_pred HHHHHHHHHHHhcCCCHHHHHHHH-HHHhcc
Confidence 9999887765 678999999995 888754
No 33
>3ot5_A UDP-N-acetylglucosamine 2-epimerase; structural genomics, center for structural genomics of infec diseases, csgid, alpha beta; HET: PGE; 2.20A {Listeria monocytogenes}
Probab=99.83 E-value=2.9e-19 Score=178.85 Aligned_cols=212 Identities=12% Similarity=0.115 Sum_probs=145.4
Q ss_pred hhcCceeccCccchhhhhhcccCCCccHHHhhhcCCeeeecCC-CCCCCcCCCCCcccccccCccCccChHHHHHHHHHH
Q 011163 220 VYSNKVVIVSSMHSKGRIIRSLSHGLESTLAIHQDKLLVAPCG-FDSSTWDPSNDKFLTENYCAEDMKGKTVCKVTLQQQ 298 (492)
Q Consensus 220 ~~ad~vi~vS~~~~~~~~~~~~~~~l~~~~~~~~~~~~vI~nG-vd~~~f~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 298 (492)
+.+|.+++.|+..++.+.. .|. +++++.++.|. +|...+.+... .+.+.+++
T Consensus 168 ~~a~~~~~~se~~~~~l~~--~Gi--------~~~~i~vvGn~~~D~~~~~~~~~-----------------~~~~~~~~ 220 (403)
T 3ot5_A 168 VMADIHFSPTKQAKENLLA--EGK--------DPATIFVTGNTAIDALKTTVQKD-----------------YHHPILEN 220 (403)
T ss_dssp HHCSEEEESSHHHHHHHHH--TTC--------CGGGEEECCCHHHHHHHHHSCTT-----------------CCCHHHHS
T ss_pred HhcCEEECCCHHHHHHHHH--cCC--------CcccEEEeCCchHHHHHhhhhhh-----------------cchHHHHh
Confidence 4589999999988776654 231 45788998884 55322222100 00123333
Q ss_pred hCCCCCCCceEEEEEecccc-ccCHHHHHHHHHHHhH--cCcEEEEEecCCChhHHHHHHHHHHHhCCCeEEEEeccCHH
Q 011163 299 LGLSKDASTIVVGCIFSDVS-DVFLENLKAVVRGAKM--RGIQFVFTGTNKLPSASRALVSFQEELKDGIVIFVDSYDDA 375 (492)
Q Consensus 299 lg~~~~~~~~~i~~~grl~~-~Kg~~~li~a~~~l~~--~~~~lvivG~g~~~~~~~~l~~~~~~~~~~~v~~~~~~~~~ 375 (492)
+ + ++..++++.+|... .|++..+++|++++.+ .++++++.+ ++.+...+.+++.... .++|.+++.....
T Consensus 221 l--~--~~~~vlv~~~r~~~~~~~l~~ll~a~~~l~~~~~~~~~v~~~-~~~~~~~~~l~~~~~~--~~~v~l~~~l~~~ 293 (403)
T 3ot5_A 221 L--G--DNRLILMTAHRRENLGEPMQGMFEAVREIVESREDTELVYPM-HLNPAVREKAMAILGG--HERIHLIEPLDAI 293 (403)
T ss_dssp C--T--TCEEEEECCCCHHHHTTHHHHHHHHHHHHHHHCTTEEEEEEC-CSCHHHHHHHHHHHTT--CTTEEEECCCCHH
T ss_pred c--c--CCCEEEEEeCcccccCcHHHHHHHHHHHHHHhCCCceEEEec-CCCHHHHHHHHHHhCC--CCCEEEeCCCCHH
Confidence 4 2 23355666777643 4778999999999875 378888875 3333344444443222 2689988888877
Q ss_pred HHHHHHhcCCEEEECCCCCCCchHHHHHhhcCCceEEE-ecCCCcccccccccccccceeeeeecCCCHHHHHHHHHHHh
Q 011163 376 LLHLIFSGSDIILCHSFHDPLLQVPLKALKYGAAPIAV-TSSDIEFRHFAEFDHESTRFSRFISSTFGNISLSQALEEIK 454 (492)
Q Consensus 376 ~~~~~~~~adi~v~pS~~E~~glv~lEAma~G~PvV~~-~~~~gg~~e~v~~~~~~~g~~G~~~~~~~~~~l~~ai~~~~ 454 (492)
+...+|+.||+++.+| |-+.+||+++|+|+|++ +. |+..|.++ .| +|+++++ |++++++++..++
T Consensus 294 ~~~~l~~~ad~vv~~S-----Gg~~~EA~a~g~PvV~~~~~--~~~~e~v~-----~g-~~~lv~~-d~~~l~~ai~~ll 359 (403)
T 3ot5_A 294 DFHNFLRKSYLVFTDS-----GGVQEEAPGMGVPVLVLRDT--TERPEGIE-----AG-TLKLIGT-NKENLIKEALDLL 359 (403)
T ss_dssp HHHHHHHHEEEEEECC-----HHHHHHGGGTTCCEEECCSS--CSCHHHHH-----HT-SEEECCS-CHHHHHHHHHHHH
T ss_pred HHHHHHHhcCEEEECC-----ccHHHHHHHhCCCEEEecCC--Ccchhhee-----CC-cEEEcCC-CHHHHHHHHHHHH
Confidence 7889999999999998 33449999999999998 56 77778764 23 6788875 8999999999999
Q ss_pred cCHHHHHHHHHHHHhccCCchhhHHHH
Q 011163 455 NNPLSWKRKIKDAMLQDFSWDADCNDI 481 (492)
Q Consensus 455 ~~~~~~~~~~~~a~~~~fsw~~~a~~~ 481 (492)
+|++.+++|++++ ..|.....++++
T Consensus 360 ~~~~~~~~m~~~~--~~~g~~~aa~rI 384 (403)
T 3ot5_A 360 DNKESHDKMAQAA--NPYGDGFAANRI 384 (403)
T ss_dssp HCHHHHHHHHHSC--CTTCCSCHHHHH
T ss_pred cCHHHHHHHHhhc--CcccCCcHHHHH
Confidence 9999999987654 345555555554
No 34
>3dzc_A UDP-N-acetylglucosamine 2-epimerase; structural genomics, in diseases, isomerase, center for structural genomics of INFE diseases, csgid; 2.35A {Vibrio cholerae}
Probab=99.82 E-value=3.5e-19 Score=177.97 Aligned_cols=282 Identities=10% Similarity=0.065 Sum_probs=179.1
Q ss_pred HHHHHHHHHcCCCCCEEEEcCchhh-hHHHHHHHHHhhcCCCCCcEEEEecCCCCCCCCCchhhhhcCCCccccCCCCcc
Q 011163 125 RASLDYIVKSRKQPDVLHIHNWETA-IVGPLFWDIFVKQGLEGTRILLSCHNLNSLCLEHPDKLALCGLDPARLHRPDRL 203 (492)
Q Consensus 125 ~~~~~~~~~~~~~pDiVh~h~~~~~-~~~~~~~~~~~~~~~~~~~~v~t~H~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 203 (492)
..+.+++++ .+||+||+|...+. +.+.+.++ ..++|+++..++...+. +.
T Consensus 101 ~~l~~~l~~--~kPDvVi~~g~~~~~~~~~~aa~------~~~IPv~h~~ag~rs~~---------------~~------ 151 (396)
T 3dzc_A 101 LGMQQVLSS--EQPDVVLVHGDTATTFAASLAAY------YQQIPVGHVEAGLRTGN---------------IY------ 151 (396)
T ss_dssp HHHHHHHHH--HCCSEEEEETTSHHHHHHHHHHH------TTTCCEEEETCCCCCSC---------------TT------
T ss_pred HHHHHHHHh--cCCCEEEEECCchhHHHHHHHHH------HhCCCEEEEECCccccc---------------cc------
Confidence 444445544 68999999974333 33233322 27899875433221000 00
Q ss_pred cCCCCCccchhhHHH-HhhcCceeccCccchhhhhhcccCCCccHHHhhhcCCeeeecCC-CCCCCcCCCCCcccccccC
Q 011163 204 QDNTKTHLVNILKGG-VVYSNKVVIVSSMHSKGRIIRSLSHGLESTLAIHQDKLLVAPCG-FDSSTWDPSNDKFLTENYC 281 (492)
Q Consensus 204 ~~~~~~~~~~~~~~~-~~~ad~vi~vS~~~~~~~~~~~~~~~l~~~~~~~~~~~~vI~nG-vd~~~f~p~~~~~~~~~~~ 281 (492)
..+ .....+.. .+.+|.+++.|+..++.+.. .|. +++++.++.|. +|...+.+..
T Consensus 152 ~~~----~~~~~r~~~~~~a~~~~~~se~~~~~l~~--~G~--------~~~ki~vvGn~~~d~~~~~~~~--------- 208 (396)
T 3dzc_A 152 SPW----PEEGNRKLTAALTQYHFAPTDTSRANLLQ--ENY--------NAENIFVTGNTVIDALLAVREK--------- 208 (396)
T ss_dssp SST----THHHHHHHHHHTCSEEEESSHHHHHHHHH--TTC--------CGGGEEECCCHHHHHHHHHHHH---------
T ss_pred cCC----cHHHHHHHHHHhcCEEECCCHHHHHHHHH--cCC--------CcCcEEEECCcHHHHHHHhhhh---------
Confidence 000 01233444 46789999999988776654 231 45688898885 4421111000
Q ss_pred ccCccChHHHHHHHHHHhC-CCCCCCceEEEEEecc-ccccCHHHHHHHHHHHhH--cCcEEEEEecCCChhHHHHHHHH
Q 011163 282 AEDMKGKTVCKVTLQQQLG-LSKDASTIVVGCIFSD-VSDVFLENLKAVVRGAKM--RGIQFVFTGTNKLPSASRALVSF 357 (492)
Q Consensus 282 ~~~~~~~~~~~~~~~~~lg-~~~~~~~~~i~~~grl-~~~Kg~~~li~a~~~l~~--~~~~lvivG~g~~~~~~~~l~~~ 357 (492)
.......+.++++++| ++.+ +..++++.+|. ...|+++.+++|++++.+ .++++++.+ |+++...+.++++
T Consensus 209 ---~~~~~~~~~~~r~~lg~l~~~-~~~vlv~~hR~~~~~~~~~~ll~A~~~l~~~~~~~~~v~~~-g~~~~~~~~l~~~ 283 (396)
T 3dzc_A 209 ---IHTDMDLQATLESQFPMLDAS-KKLILVTGHRRESFGGGFERICQALITTAEQHPECQILYPV-HLNPNVREPVNKL 283 (396)
T ss_dssp ---HHHCHHHHHHHHHTCTTCCTT-SEEEEEECSCBCCCTTHHHHHHHHHHHHHHHCTTEEEEEEC-CBCHHHHHHHHHH
T ss_pred ---cccchhhHHHHHHHhCccCCC-CCEEEEEECCcccchhHHHHHHHHHHHHHHhCCCceEEEEe-CCChHHHHHHHHH
Confidence 0000011367788898 4443 23445555564 345789999999999875 378888864 2223444555543
Q ss_pred HHHhCCCeEEEEeccCHHHHHHHHhcCCEEEECCCCCCCchHHHHHhhcCCceEEE-ecCCCcccccccccccccceeee
Q 011163 358 QEELKDGIVIFVDSYDDALLHLIFSGSDIILCHSFHDPLLQVPLKALKYGAAPIAV-TSSDIEFRHFAEFDHESTRFSRF 436 (492)
Q Consensus 358 ~~~~~~~~v~~~~~~~~~~~~~~~~~adi~v~pS~~E~~glv~lEAma~G~PvV~~-~~~~gg~~e~v~~~~~~~g~~G~ 436 (492)
... .++|.+++.....+...+|+.||++|.+| | |++ +|||++|+|+|++ +. ++..|.++. | +++
T Consensus 284 ~~~--~~~v~~~~~lg~~~~~~l~~~ad~vv~~S---G-g~~-~EA~a~G~PvV~~~~~--~~~~e~v~~-----G-~~~ 348 (396)
T 3dzc_A 284 LKG--VSNIVLIEPQQYLPFVYLMDRAHIILTDS---G-GIQ-EEAPSLGKPVLVMRET--TERPEAVAA-----G-TVK 348 (396)
T ss_dssp TTT--CTTEEEECCCCHHHHHHHHHHCSEEEESC---S-GGG-TTGGGGTCCEEECCSS--CSCHHHHHH-----T-SEE
T ss_pred HcC--CCCEEEeCCCCHHHHHHHHHhcCEEEECC---c-cHH-HHHHHcCCCEEEccCC--CcchHHHHc-----C-ceE
Confidence 222 26899887777666779999999999999 3 554 8999999999998 56 777787752 3 357
Q ss_pred eecCCCHHHHHHHHHHHhcCHHHHHHHHHHHHhccCCchhhHHHH
Q 011163 437 ISSTFGNISLSQALEEIKNNPLSWKRKIKDAMLQDFSWDADCNDI 481 (492)
Q Consensus 437 ~~~~~~~~~l~~ai~~~~~~~~~~~~~~~~a~~~~fsw~~~a~~~ 481 (492)
+++. |+++|++++..+++|++.+++|++++ ..|.....++++
T Consensus 349 lv~~-d~~~l~~ai~~ll~d~~~~~~m~~~~--~~~~~~~aa~ri 390 (396)
T 3dzc_A 349 LVGT-NQQQICDALSLLLTDPQAYQAMSQAH--NPYGDGKACQRI 390 (396)
T ss_dssp ECTT-CHHHHHHHHHHHHHCHHHHHHHHTSC--CTTCCSCHHHHH
T ss_pred EcCC-CHHHHHHHHHHHHcCHHHHHHHhhcc--CCCcCChHHHHH
Confidence 7764 89999999999999999999998764 457766666664
No 35
>3rhz_A GTF3, nucleotide sugar synthetase-like protein; glycosyltransferase, transferase; HET: UDP; 1.90A {Streptococcus parasanguinis} PDB: 3qkw_A*
Probab=99.81 E-value=3.9e-19 Score=172.76 Aligned_cols=253 Identities=12% Similarity=-0.041 Sum_probs=170.5
Q ss_pred CCCCCEEEEcCch--hhhH-HHHHHHHHhhcCCCCCcEEEEecCCCCCCCCCchhhhhcCCCccccCCCCcccCCCCCcc
Q 011163 135 RKQPDVLHIHNWE--TAIV-GPLFWDIFVKQGLEGTRILLSCHNLNSLCLEHPDKLALCGLDPARLHRPDRLQDNTKTHL 211 (492)
Q Consensus 135 ~~~pDiVh~h~~~--~~~~-~~~~~~~~~~~~~~~~~~v~t~H~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 211 (492)
-.++|+|++++.. ...+ ..++ ++++ ..++|+|+.+||+.+... ... . ..
T Consensus 72 ~~~~DvIi~q~P~~~~~~~~~~~~-~~lk---~~~~k~i~~ihDl~pl~~-----------~~~--------~-----~~ 123 (339)
T 3rhz_A 72 LRHGDVVIFQTPTWNTTEFDEKLM-NKLK---LYDIKIVLFIHDVVPLMF-----------SGN--------F-----YL 123 (339)
T ss_dssp CCTTCEEEEEECCSSCHHHHHHHH-HHHT---TSSCEEEEEESCCHHHHC-----------GGG--------G-----GG
T ss_pred CCCCCEEEEeCCCcchhhHHHHHH-HHHH---hcCCEEEEEecccHHhhC-----------ccc--------h-----hh
Confidence 3679999998732 2222 2333 3322 248999999998742110 000 0 01
Q ss_pred chhhHHHHhhcCceeccCccchhhhhhcccCCCccHHHhhhcCCeeeecCCCCCCCcCCCCCcccccccCccCccChHHH
Q 011163 212 VNILKGGVVYSNKVVIVSSMHSKGRIIRSLSHGLESTLAIHQDKLLVAPCGFDSSTWDPSNDKFLTENYCAEDMKGKTVC 291 (492)
Q Consensus 212 ~~~~~~~~~~ad~vi~vS~~~~~~~~~~~~~~~l~~~~~~~~~~~~vI~nGvd~~~f~p~~~~~~~~~~~~~~~~~~~~~ 291 (492)
...++..++.||.|+++|+.+.+.+.. .|. ...++.++++. |.. .+..
T Consensus 124 ~~~E~~~y~~aD~Ii~~S~~~~~~l~~--~G~--------~~~ki~~~~~~-~~~--~~~~------------------- 171 (339)
T 3rhz_A 124 MDRTIAYYNKADVVVAPSQKMIDKLRD--FGM--------NVSKTVVQGMW-DHP--TQAP------------------- 171 (339)
T ss_dssp HHHHHHHHTTCSEEEESCHHHHHHHHH--TTC--------CCSEEEECCSC-CCC--CCCC-------------------
T ss_pred HHHHHHHHHHCCEEEECCHHHHHHHHH--cCC--------CcCceeecCCC-Ccc--Cccc-------------------
Confidence 235778899999999999999887765 231 22444333221 211 0100
Q ss_pred HHHHHHHhCCCCCCCceEEEEEeccccccCHHHHHHHHHHHhHcCcEEEEEecCCChhHHHHHHHHHHHhCCCeEEEEec
Q 011163 292 KVTLQQQLGLSKDASTIVVGCIFSDVSDVFLENLKAVVRGAKMRGIQFVFTGTNKLPSASRALVSFQEELKDGIVIFVDS 371 (492)
Q Consensus 292 ~~~~~~~lg~~~~~~~~~i~~~grl~~~Kg~~~li~a~~~l~~~~~~lvivG~g~~~~~~~~l~~~~~~~~~~~v~~~~~ 371 (492)
.......+.++|+|++.+... ++.+ ..+++|+|+|+|++. ++ .||.|+|.
T Consensus 172 ---------~~~~~~~~~i~yaG~l~k~~~----L~~l----~~~~~f~ivG~G~~~-----------~l--~nV~f~G~ 221 (339)
T 3rhz_A 172 ---------MFPAGLKREIHFPGNPERFSF----VKEW----KYDIPLKVYTWQNVE-----------LP--QNVHKINY 221 (339)
T ss_dssp ---------CCCCEEEEEEEECSCTTTCGG----GGGC----CCSSCEEEEESCCCC-----------CC--TTEEEEEC
T ss_pred ---------ccccCCCcEEEEeCCcchhhH----HHhC----CCCCeEEEEeCCccc-----------Cc--CCEEEeCC
Confidence 000113478999999986433 2222 258999999988531 23 39999999
Q ss_pred cCHHHHHHHHhcCCEEEECCC-------CCCCchHHHHHhhcCCceEEEecCCCcccccccccccccceeeeeecCCCHH
Q 011163 372 YDDALLHLIFSGSDIILCHSF-------HDPLLQVPLKALKYGAAPIAVTSSDIEFRHFAEFDHESTRFSRFISSTFGNI 444 (492)
Q Consensus 372 ~~~~~~~~~~~~adi~v~pS~-------~E~~glv~lEAma~G~PvV~~~~~~gg~~e~v~~~~~~~g~~G~~~~~~~~~ 444 (492)
++.++++.+++.+|+.+++.. ..++|.-+.|+||||+|||+++. |++.|+|++ +.+|++++ +.+
T Consensus 222 ~~~~el~~~l~~~~~~lv~~~~~~~~y~~~~~P~Kl~eymA~G~PVI~~~~--~~~~~~v~~-----~~~G~~~~--~~~ 292 (339)
T 3rhz_A 222 RPDEQLLMEMSQGGFGLVWMDDKDKEYQSLYCSYKLGSFLAAGIPVIVQEG--IANQELIEN-----NGLGWIVK--DVE 292 (339)
T ss_dssp CCHHHHHHHHHTEEEEECCCCGGGHHHHTTCCCHHHHHHHHHTCCEEEETT--CTTTHHHHH-----HTCEEEES--SHH
T ss_pred CCHHHHHHHHHhCCEEEEECCCchhHHHHhcChHHHHHHHHcCCCEEEccC--hhHHHHHHh-----CCeEEEeC--CHH
Confidence 999999999988888887611 02468889999999999999998 999999873 45789986 578
Q ss_pred HHHHHHHHHhcCHHHHHHHHHHHHh--ccCCchhhHHHHHHHHHHH
Q 011163 445 SLSQALEEIKNNPLSWKRKIKDAML--QDFSWDADCNDIHISAYTA 488 (492)
Q Consensus 445 ~l~~ai~~~~~~~~~~~~~~~~a~~--~~fsw~~~a~~~~~~~Y~~ 488 (492)
+++++|..+ +++.+++|+++++. ++++|...+++...+.+.+
T Consensus 293 e~~~~i~~l--~~~~~~~m~~na~~~a~~~~~~~f~k~~l~~~~~~ 336 (339)
T 3rhz_A 293 EAIMKVKNV--NEDEYIELVKNVRSFNPILRKGFFTRRLLTESVFQ 336 (339)
T ss_dssp HHHHHHHHC--CHHHHHHHHHHHHHHTHHHHTTHHHHHHHHHHHHH
T ss_pred HHHHHHHHh--CHHHHHHHHHHHHHHHHHhhccHHHHHHHHHHHHH
Confidence 899999886 46778999999976 6788888887754444443
No 36
>3s2u_A UDP-N-acetylglucosamine--N-acetylmuramyl-(pentape pyrophosphoryl-undecaprenol N-acetylglucosamine...; N-acetylglucosaminyl transferase; HET: UD1; 2.23A {Pseudomonas aeruginosa}
Probab=99.79 E-value=3.6e-17 Score=161.67 Aligned_cols=161 Identities=8% Similarity=-0.020 Sum_probs=106.5
Q ss_pred eEEEEEeccccccCHHHHHHHHHHHhHc-CcEEEEEecCCChhHHHHHHHHHHHhCCCeEEEEeccCHHHHHHHHhcCCE
Q 011163 308 IVVGCIFSDVSDVFLENLKAVVRGAKMR-GIQFVFTGTNKLPSASRALVSFQEELKDGIVIFVDSYDDALLHLIFSGSDI 386 (492)
Q Consensus 308 ~~i~~~grl~~~Kg~~~li~a~~~l~~~-~~~lvivG~g~~~~~~~~l~~~~~~~~~~~v~~~~~~~~~~~~~~~~~adi 386 (492)
.++++.|+....+..+.+.++++.+... +.++++.. |.. . .+.+++..+..+ .++.+.+.. + ++.++|+.||+
T Consensus 182 ~ilv~gGs~g~~~~~~~~~~al~~l~~~~~~~vi~~~-G~~-~-~~~~~~~~~~~~-~~~~v~~f~-~-dm~~~l~~aDl 255 (365)
T 3s2u_A 182 NLLVLGGSLGAEPLNKLLPEALAQVPLEIRPAIRHQA-GRQ-H-AEITAERYRTVA-VEADVAPFI-S-DMAAAYAWADL 255 (365)
T ss_dssp EEEECCTTTTCSHHHHHHHHHHHTSCTTTCCEEEEEC-CTT-T-HHHHHHHHHHTT-CCCEEESCC-S-CHHHHHHHCSE
T ss_pred EEEEECCcCCccccchhhHHHHHhcccccceEEEEec-Ccc-c-cccccceecccc-cccccccch-h-hhhhhhccceE
Confidence 4555667888888778888888887643 56665544 321 2 334455555553 466655433 3 35688999999
Q ss_pred EEECCCCCCCchHHHHHhhcCCceEEEecCCCcccc--------cccccccccceeeeeecCC--CHHHHHHHHHHHhcC
Q 011163 387 ILCHSFHDPLLQVPLKALKYGAAPIAVTSSDIEFRH--------FAEFDHESTRFSRFISSTF--GNISLSQALEEIKNN 456 (492)
Q Consensus 387 ~v~pS~~E~~glv~lEAma~G~PvV~~~~~~gg~~e--------~v~~~~~~~g~~G~~~~~~--~~~~l~~ai~~~~~~ 456 (492)
+|.-+ -+.++.|+|++|+|+|.... ....+ .+. +.+.|++++.. +++.|+++|..+++|
T Consensus 256 vI~ra----G~~Tv~E~~a~G~P~Ilip~--p~~~~~~Q~~NA~~l~-----~~G~a~~l~~~~~~~~~L~~~i~~ll~d 324 (365)
T 3s2u_A 256 VICRA----GALTVSELTAAGLPAFLVPL--PHAIDDHQTRNAEFLV-----RSGAGRLLPQKSTGAAELAAQLSEVLMH 324 (365)
T ss_dssp EEECC----CHHHHHHHHHHTCCEEECC-------CCHHHHHHHHHH-----TTTSEEECCTTTCCHHHHHHHHHHHHHC
T ss_pred EEecC----CcchHHHHHHhCCCeEEecc--CCCCCcHHHHHHHHHH-----HCCCEEEeecCCCCHHHHHHHHHHHHCC
Confidence 99654 37899999999999998665 32211 121 12346777654 478999999999999
Q ss_pred HHHHHHHHHHHHh--ccCCchhhHHHHHHHHH
Q 011163 457 PLSWKRKIKDAML--QDFSWDADCNDIHISAY 486 (492)
Q Consensus 457 ~~~~~~~~~~a~~--~~fsw~~~a~~~~~~~Y 486 (492)
|+.+++|++++++ .....+++++.+ +++-
T Consensus 325 ~~~~~~m~~~a~~~~~~~aa~~ia~~i-~~la 355 (365)
T 3s2u_A 325 PETLRSMADQARSLAKPEATRTVVDAC-LEVA 355 (365)
T ss_dssp THHHHHHHHHHHHTCCTTHHHHHHHHH-HHHC
T ss_pred HHHHHHHHHHHHhcCCccHHHHHHHHH-HHHH
Confidence 9999999999876 334455555553 4443
No 37
>2iyf_A OLED, oleandomycin glycosyltransferase; antibiotic resistance, glycosylation, enzyme, macrolide, carbohydrate; HET: ERY UDP; 1.7A {Streptomyces antibioticus}
Probab=99.78 E-value=3e-17 Score=166.16 Aligned_cols=159 Identities=16% Similarity=0.041 Sum_probs=111.6
Q ss_pred CceEEEEEeccccccCHHHHHHHHHHHhHc-CcEE-EEEecCCChhHHHHHHHHHHHhCCCeEEEEeccCHHHHHHHHhc
Q 011163 306 STIVVGCIFSDVSDVFLENLKAVVRGAKMR-GIQF-VFTGTNKLPSASRALVSFQEELKDGIVIFVDSYDDALLHLIFSG 383 (492)
Q Consensus 306 ~~~~i~~~grl~~~Kg~~~li~a~~~l~~~-~~~l-vivG~g~~~~~~~~l~~~~~~~~~~~v~~~~~~~~~~~~~~~~~ 383 (492)
+..++++.|++. .++.+.+.++++.+.+. ++++ +++|.+.+. +.++ .+ .++|.+.+..++. .+|+.
T Consensus 232 ~~~v~v~~Gs~~-~~~~~~~~~~~~~l~~~~~~~~~~~~G~~~~~---~~l~----~~-~~~v~~~~~~~~~---~~l~~ 299 (430)
T 2iyf_A 232 EKVVLVSLGSAF-TKQPAFYRECVRAFGNLPGWHLVLQIGRKVTP---AELG----EL-PDNVEVHDWVPQL---AILRQ 299 (430)
T ss_dssp SEEEEEECTTTC-C-CHHHHHHHHHHHTTCTTEEEEEECC---CG---GGGC----SC-CTTEEEESSCCHH---HHHTT
T ss_pred CCeEEEEcCCCC-CCcHHHHHHHHHHHhcCCCeEEEEEeCCCCCh---HHhc----cC-CCCeEEEecCCHH---HHhhc
Confidence 346788999998 55656666555555543 6787 467765321 1121 23 3689988766653 67999
Q ss_pred CCEEEECCCCCCCchHHHHHhhcCCceEEEecCCCc----ccccccccccccceeeeeecCC--CHHHHHHHHHHHhcCH
Q 011163 384 SDIILCHSFHDPLLQVPLKALKYGAAPIAVTSSDIE----FRHFAEFDHESTRFSRFISSTF--GNISLSQALEEIKNNP 457 (492)
Q Consensus 384 adi~v~pS~~E~~glv~lEAma~G~PvV~~~~~~gg----~~e~v~~~~~~~g~~G~~~~~~--~~~~l~~ai~~~~~~~ 457 (492)
||++|..+- +.+++|||++|+|+|++.. ++ ..+.+. +.+.|++++++ ++++|+++|.++++|+
T Consensus 300 ad~~v~~~G----~~t~~Ea~~~G~P~i~~p~--~~~q~~~a~~~~-----~~g~g~~~~~~~~~~~~l~~~i~~ll~~~ 368 (430)
T 2iyf_A 300 ADLFVTHAG----AGGSQEGLATATPMIAVPQ--AVDQFGNADMLQ-----GLGVARKLATEEATADLLRETALALVDDP 368 (430)
T ss_dssp CSEEEECCC----HHHHHHHHHTTCCEEECCC--SHHHHHHHHHHH-----HTTSEEECCCC-CCHHHHHHHHHHHHHCH
T ss_pred cCEEEECCC----ccHHHHHHHhCCCEEECCC--ccchHHHHHHHH-----HcCCEEEcCCCCCCHHHHHHHHHHHHcCH
Confidence 999998763 3789999999999999876 54 233343 23468888876 7899999999999999
Q ss_pred HHHHHHHHHHHh--ccCCchhhHHHHHHHHHHH
Q 011163 458 LSWKRKIKDAML--QDFSWDADCNDIHISAYTA 488 (492)
Q Consensus 458 ~~~~~~~~~a~~--~~fsw~~~a~~~~~~~Y~~ 488 (492)
+.++++++.+.. ..++|+.+++.+ +++|++
T Consensus 369 ~~~~~~~~~~~~~~~~~~~~~~~~~i-~~~~~~ 400 (430)
T 2iyf_A 369 EVARRLRRIQAEMAQEGGTRRAADLI-EAELPA 400 (430)
T ss_dssp HHHHHHHHHHHHHHHHCHHHHHHHHH-HTTSCC
T ss_pred HHHHHHHHHHHHHHhcCcHHHHHHHH-HHHhhc
Confidence 988888877654 567899998885 766643
No 38
>4fzr_A SSFS6; structural genomics, PSI-biology, protein structure initiati enzyme discovery for natural product biosynthesis, natPro; 2.40A {Streptomyces SP} PDB: 4g2t_A*
Probab=99.75 E-value=9.3e-18 Score=168.16 Aligned_cols=151 Identities=17% Similarity=0.101 Sum_probs=97.0
Q ss_pred CceEEEEEecccccc----------CHHHHHHHHHHHhHcCcEEEEEecCCChhHHHHHHHHHHHhCCCeEEEEeccCHH
Q 011163 306 STIVVGCIFSDVSDV----------FLENLKAVVRGAKMRGIQFVFTGTNKLPSASRALVSFQEELKDGIVIFVDSYDDA 375 (492)
Q Consensus 306 ~~~~i~~~grl~~~K----------g~~~li~a~~~l~~~~~~lvivG~g~~~~~~~~l~~~~~~~~~~~v~~~~~~~~~ 375 (492)
...++++.|++...| .+..+++++.+ .++++++++++.+ .+.+. .+ .++|.+.+..+
T Consensus 227 ~~~v~v~~G~~~~~~~~~~~~~~~~~~~~~~~al~~---~~~~~v~~~~~~~---~~~l~----~~-~~~v~~~~~~~-- 293 (398)
T 4fzr_A 227 QPRLCLTFGTRVPLPNTNTIPGGLSLLQALSQELPK---LGFEVVVAVSDKL---AQTLQ----PL-PEGVLAAGQFP-- 293 (398)
T ss_dssp SCEEECC----------------CCSHHHHHHHGGG---GTCEEEECCCC---------------C-CTTEEEESCCC--
T ss_pred CCEEEEEccCcccccccccccchHHHHHHHHHHHHh---CCCEEEEEeCCcc---hhhhc----cC-CCcEEEeCcCC--
Confidence 346777889986554 34445555443 3789999884421 22222 23 37899887664
Q ss_pred HHHHHHhcCCEEEECCCCCCCchHHHHHhhcCCceEEEecCCC----cccccccccccccceeeeeecCC--CHHHHHHH
Q 011163 376 LLHLIFSGSDIILCHSFHDPLLQVPLKALKYGAAPIAVTSSDI----EFRHFAEFDHESTRFSRFISSTF--GNISLSQA 449 (492)
Q Consensus 376 ~~~~~~~~adi~v~pS~~E~~glv~lEAma~G~PvV~~~~~~g----g~~e~v~~~~~~~g~~G~~~~~~--~~~~l~~a 449 (492)
...+++.||++|.. +.+.+++|||++|+|+|+... + +..+.+. ..+.|+++++. ++++|+++
T Consensus 294 -~~~ll~~ad~~v~~----gG~~t~~Ea~~~G~P~v~~p~--~~~q~~~a~~~~-----~~g~g~~~~~~~~~~~~l~~a 361 (398)
T 4fzr_A 294 -LSAIMPACDVVVHH----GGHGTTLTCLSEGVPQVSVPV--IAEVWDSARLLH-----AAGAGVEVPWEQAGVESVLAA 361 (398)
T ss_dssp -HHHHGGGCSEEEEC----CCHHHHHHHHHTTCCEEECCC--SGGGHHHHHHHH-----HTTSEEECC-------CHHHH
T ss_pred -HHHHHhhCCEEEec----CCHHHHHHHHHhCCCEEecCC--chhHHHHHHHHH-----HcCCEEecCcccCCHHHHHHH
Confidence 35789999999964 447889999999999999654 3 3344443 24468888876 77899999
Q ss_pred HHHHhcCHHHHHHHHHHHHh--ccCCchhhHHHH
Q 011163 450 LEEIKNNPLSWKRKIKDAML--QDFSWDADCNDI 481 (492)
Q Consensus 450 i~~~~~~~~~~~~~~~~a~~--~~fsw~~~a~~~ 481 (492)
|.++++|++.++++++.+.. ...+|+.+++.+
T Consensus 362 i~~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 395 (398)
T 4fzr_A 362 CARIRDDSSYVGNARRLAAEMATLPTPADIVRLI 395 (398)
T ss_dssp HHHHHHCTHHHHHHHHHHHHHTTSCCHHHHHHHH
T ss_pred HHHHHhCHHHHHHHHHHHHHHHcCCCHHHHHHHH
Confidence 99999999999988887765 678999888774
No 39
>3ia7_A CALG4; glycosysltransferase, calicheamicin, enediyne, transf; 1.91A {Micromonospora echinospora}
Probab=99.73 E-value=1.1e-15 Score=153.05 Aligned_cols=161 Identities=11% Similarity=-0.019 Sum_probs=107.9
Q ss_pred CceEEEEEeccccccCHHHHHHHHHHHhHcCcEEEEE-ecCCChhHHHHHHHHHHHhCCCeEEEEeccCHHHHHHHHhcC
Q 011163 306 STIVVGCIFSDVSDVFLENLKAVVRGAKMRGIQFVFT-GTNKLPSASRALVSFQEELKDGIVIFVDSYDDALLHLIFSGS 384 (492)
Q Consensus 306 ~~~~i~~~grl~~~Kg~~~li~a~~~l~~~~~~lviv-G~g~~~~~~~~l~~~~~~~~~~~v~~~~~~~~~~~~~~~~~a 384 (492)
...++++.|+....+. +.+.++++.+.+.+++++++ |.+.+ .+.++ .+ .+++.+.+..+.. ++|+.|
T Consensus 231 ~~~v~v~~G~~~~~~~-~~~~~~~~~~~~~~~~~~~~~g~~~~---~~~~~----~~-~~~v~~~~~~~~~---~ll~~a 298 (402)
T 3ia7_A 231 APVLLVSLGNQFNEHP-EFFRACAQAFADTPWHVVMAIGGFLD---PAVLG----PL-PPNVEAHQWIPFH---SVLAHA 298 (402)
T ss_dssp CCEEEEECCSCSSCCH-HHHHHHHHHHTTSSCEEEEECCTTSC---GGGGC----SC-CTTEEEESCCCHH---HHHTTE
T ss_pred CCEEEEECCCCCcchH-HHHHHHHHHHhcCCcEEEEEeCCcCC---hhhhC----CC-CCcEEEecCCCHH---HHHhhC
Confidence 3467788899876652 33444444444445777764 43322 11111 12 3689887665554 789999
Q ss_pred CEEEECCCCCCCchHHHHHhhcCCceEEEec-CC--CcccccccccccccceeeeeecCC--CHHHHHHHHHHHhcCHHH
Q 011163 385 DIILCHSFHDPLLQVPLKALKYGAAPIAVTS-SD--IEFRHFAEFDHESTRFSRFISSTF--GNISLSQALEEIKNNPLS 459 (492)
Q Consensus 385 di~v~pS~~E~~glv~lEAma~G~PvV~~~~-~~--gg~~e~v~~~~~~~g~~G~~~~~~--~~~~l~~ai~~~~~~~~~ 459 (492)
|++|..|- ..+++|||++|+|+|+... .. .+..+.+. ..+.|..++++ ++++|++++.++++|++.
T Consensus 299 d~~v~~~G----~~t~~Ea~~~G~P~v~~p~~~~~q~~~a~~~~-----~~g~g~~~~~~~~~~~~l~~~~~~ll~~~~~ 369 (402)
T 3ia7_A 299 RACLTHGT----TGAVLEAFAAGVPLVLVPHFATEAAPSAERVI-----ELGLGSVLRPDQLEPASIREAVERLAADSAV 369 (402)
T ss_dssp EEEEECCC----HHHHHHHHHTTCCEEECGGGCGGGHHHHHHHH-----HTTSEEECCGGGCSHHHHHHHHHHHHHCHHH
T ss_pred CEEEECCC----HHHHHHHHHhCCCEEEeCCCcccHHHHHHHHH-----HcCCEEEccCCCCCHHHHHHHHHHHHcCHHH
Confidence 99998764 3678999999999997432 00 12333333 23467888766 789999999999999998
Q ss_pred HHHHHHHHHh--ccCCchhhHHHHHHHHHHH
Q 011163 460 WKRKIKDAML--QDFSWDADCNDIHISAYTA 488 (492)
Q Consensus 460 ~~~~~~~a~~--~~fsw~~~a~~~~~~~Y~~ 488 (492)
++++.+.+.. ...+++.+++.+ ++++.+
T Consensus 370 ~~~~~~~~~~~~~~~~~~~~~~~i-~~~~~~ 399 (402)
T 3ia7_A 370 RERVRRMQRDILSSGGPARAADEV-EAYLGR 399 (402)
T ss_dssp HHHHHHHHHHHHTSCHHHHHHHHH-HHHHHH
T ss_pred HHHHHHHHHHHhhCChHHHHHHHH-HHHHhh
Confidence 8888776654 678899999885 777764
No 40
>3tsa_A SPNG, NDP-rhamnosyltransferase; glycosyltransferase; HET: GLC; 1.70A {Saccharopolyspora spinosa} PDB: 3uyk_A* 3uyl_A*
Probab=99.70 E-value=5.2e-16 Score=154.98 Aligned_cols=159 Identities=11% Similarity=0.044 Sum_probs=110.1
Q ss_pred ceEEEEEeccccccCH-HHHHHHHHHHhHc-CcEEEEEecCCChhHHHHHHHHHHHhCCCeEEEEeccCHHHHHHHHhcC
Q 011163 307 TIVVGCIFSDVSDVFL-ENLKAVVRGAKMR-GIQFVFTGTNKLPSASRALVSFQEELKDGIVIFVDSYDDALLHLIFSGS 384 (492)
Q Consensus 307 ~~~i~~~grl~~~Kg~-~~li~a~~~l~~~-~~~lvivG~g~~~~~~~~l~~~~~~~~~~~v~~~~~~~~~~~~~~~~~a 384 (492)
..++++.|+....|+. ..+++++.+..+. +++++++|++.+ .+.+. .. .+++++.+..+.. .+++.|
T Consensus 219 ~~vlv~~G~~~~~~~~~~~~~~~~~~~~~~p~~~~v~~~~~~~---~~~l~----~~-~~~v~~~~~~~~~---~ll~~a 287 (391)
T 3tsa_A 219 RRVCICMGRMVLNATGPAPLLRAVAAATELPGVEAVIAVPPEH---RALLT----DL-PDNARIAESVPLN---LFLRTC 287 (391)
T ss_dssp EEEEEECCHHHHHHHCSHHHHHHHHHHHTSTTEEEEEECCGGG---GGGCT----TC-CTTEEECCSCCGG---GTGGGC
T ss_pred CEEEEEcCCCCCcccchHHHHHHHHHhccCCCeEEEEEECCcc---hhhcc----cC-CCCEEEeccCCHH---HHHhhC
Confidence 4567778998765444 5666666555323 789999984421 11121 22 3688887666543 457999
Q ss_pred CEEEECCCCCCCchHHHHHhhcCCceEEEecCC--CcccccccccccccceeeeeecC----CCHHHHHHHHHHHhcCHH
Q 011163 385 DIILCHSFHDPLLQVPLKALKYGAAPIAVTSSD--IEFRHFAEFDHESTRFSRFISST----FGNISLSQALEEIKNNPL 458 (492)
Q Consensus 385 di~v~pS~~E~~glv~lEAma~G~PvV~~~~~~--gg~~e~v~~~~~~~g~~G~~~~~----~~~~~l~~ai~~~~~~~~ 458 (492)
|++|.. +.+.+++|||++|+|+|+..... .+..+.+. ..+.|.++++ .++++|++++.++++|++
T Consensus 288 d~~v~~----~G~~t~~Ea~~~G~P~v~~p~~~~q~~~a~~~~-----~~g~g~~~~~~~~~~~~~~l~~ai~~ll~~~~ 358 (391)
T 3tsa_A 288 ELVICA----GGSGTAFTATRLGIPQLVLPQYFDQFDYARNLA-----AAGAGICLPDEQAQSDHEQFTDSIATVLGDTG 358 (391)
T ss_dssp SEEEEC----CCHHHHHHHHHTTCCEEECCCSTTHHHHHHHHH-----HTTSEEECCSHHHHTCHHHHHHHHHHHHTCTH
T ss_pred CEEEeC----CCHHHHHHHHHhCCCEEecCCcccHHHHHHHHH-----HcCCEEecCcccccCCHHHHHHHHHHHHcCHH
Confidence 999965 44578999999999999964400 22233333 2346888887 789999999999999999
Q ss_pred HHHHHHHHHHh--ccCCchhhHHHHHHHHH
Q 011163 459 SWKRKIKDAML--QDFSWDADCNDIHISAY 486 (492)
Q Consensus 459 ~~~~~~~~a~~--~~fsw~~~a~~~~~~~Y 486 (492)
.++++++.+.. ...+|+.+++.+ +++.
T Consensus 359 ~~~~~~~~~~~~~~~~~~~~~~~~i-~~~~ 387 (391)
T 3tsa_A 359 FAAAAIKLSDEITAMPHPAALVRTL-ENTA 387 (391)
T ss_dssp HHHHHHHHHHHHHTSCCHHHHHHHH-HHC-
T ss_pred HHHHHHHHHHHHHcCCCHHHHHHHH-HHHH
Confidence 98888877654 678999988885 6544
No 41
>3oti_A CALG3; calicheamicin, TDP, structural genomics, PSI-2, protein STRU initiative, center for eukaryotic structural genomics, CESG fold; HET: TYD C0T; 1.60A {Micromonospora echinospora} PDB: 3d0q_A* 3d0r_A*
Probab=99.69 E-value=6.8e-16 Score=154.58 Aligned_cols=154 Identities=10% Similarity=-0.030 Sum_probs=108.4
Q ss_pred CceEEEEEeccccc-cCHHHHHHHHHHHhHcCcEEEEEecCCChhHHHHHHHHHHHhCCCeEEEEeccCHHHHHHHHhcC
Q 011163 306 STIVVGCIFSDVSD-VFLENLKAVVRGAKMRGIQFVFTGTNKLPSASRALVSFQEELKDGIVIFVDSYDDALLHLIFSGS 384 (492)
Q Consensus 306 ~~~~i~~~grl~~~-Kg~~~li~a~~~l~~~~~~lvivG~g~~~~~~~~l~~~~~~~~~~~v~~~~~~~~~~~~~~~~~a 384 (492)
...++++.|++... ++.+.+.++++.+.+.++++++++++.+. +.++ .+ .++|.+.+..+. .++++.|
T Consensus 232 ~~~v~v~~G~~~~~~~~~~~~~~~~~~l~~~~~~~v~~~g~~~~---~~l~----~~-~~~v~~~~~~~~---~~ll~~a 300 (398)
T 3oti_A 232 RPEVAITMGTIELQAFGIGAVEPIIAAAGEVDADFVLALGDLDI---SPLG----TL-PRNVRAVGWTPL---HTLLRTC 300 (398)
T ss_dssp SCEEEECCTTTHHHHHCGGGHHHHHHHHHTSSSEEEEECTTSCC---GGGC----SC-CTTEEEESSCCH---HHHHTTC
T ss_pred CCEEEEEcCCCccccCcHHHHHHHHHHHHcCCCEEEEEECCcCh---hhhc----cC-CCcEEEEccCCH---HHHHhhC
Confidence 34677888998665 46666666666666558999999855321 1111 23 378998876643 4678999
Q ss_pred CEEEECCCCCCCchHHHHHhhcCCceEEE----ecCCCccc--ccccccccccceeeeeecCC--CHHHHHHHHHHHhcC
Q 011163 385 DIILCHSFHDPLLQVPLKALKYGAAPIAV----TSSDIEFR--HFAEFDHESTRFSRFISSTF--GNISLSQALEEIKNN 456 (492)
Q Consensus 385 di~v~pS~~E~~glv~lEAma~G~PvV~~----~~~~gg~~--e~v~~~~~~~g~~G~~~~~~--~~~~l~~ai~~~~~~ 456 (492)
|++|.. +.+.+++|||++|+|+|+. +. .+.. +.+. ..+.|+++++. ++++++ ++++|
T Consensus 301 d~~v~~----~G~~t~~Eal~~G~P~v~~p~~~dq--~~~a~~~~~~-----~~g~g~~~~~~~~~~~~l~----~ll~~ 365 (398)
T 3oti_A 301 TAVVHH----GGGGTVMTAIDAGIPQLLAPDPRDQ--FQHTAREAVS-----RRGIGLVSTSDKVDADLLR----RLIGD 365 (398)
T ss_dssp SEEEEC----CCHHHHHHHHHHTCCEEECCCTTCC--SSCTTHHHHH-----HHTSEEECCGGGCCHHHHH----HHHHC
T ss_pred CEEEEC----CCHHHHHHHHHhCCCEEEcCCCchh--HHHHHHHHHH-----HCCCEEeeCCCCCCHHHHH----HHHcC
Confidence 999965 4457899999999999994 43 4455 5554 23468888765 455555 77889
Q ss_pred HHHHHHHHHHHHh--ccCCchhhHHHHHHHHH
Q 011163 457 PLSWKRKIKDAML--QDFSWDADCNDIHISAY 486 (492)
Q Consensus 457 ~~~~~~~~~~a~~--~~fsw~~~a~~~~~~~Y 486 (492)
++.++++++.+.. ...+|+.+++.+ +++.
T Consensus 366 ~~~~~~~~~~~~~~~~~~~~~~~~~~l-~~l~ 396 (398)
T 3oti_A 366 ESLRTAAREVREEMVALPTPAETVRRI-VERI 396 (398)
T ss_dssp HHHHHHHHHHHHHHHTSCCHHHHHHHH-HHHH
T ss_pred HHHHHHHHHHHHHHHhCCCHHHHHHHH-HHHh
Confidence 9998888877765 778999998885 6654
No 42
>3rsc_A CALG2; TDP, enediyne, structural genomics, PSI-2, protein structure initiative, center for eukaryotic structural genomics; HET: TYD C0T; 2.19A {Micromonospora echinospora} PDB: 3iaa_A*
Probab=99.66 E-value=3.2e-14 Score=143.14 Aligned_cols=159 Identities=13% Similarity=0.041 Sum_probs=105.3
Q ss_pred CceEEEEEeccccccCHHHHHHHHHHHhHcCcEEEEE-ecCCChhHHHHHHHHHHHhCCCeEEEEeccCHHHHHHHHhcC
Q 011163 306 STIVVGCIFSDVSDVFLENLKAVVRGAKMRGIQFVFT-GTNKLPSASRALVSFQEELKDGIVIFVDSYDDALLHLIFSGS 384 (492)
Q Consensus 306 ~~~~i~~~grl~~~Kg~~~li~a~~~l~~~~~~lviv-G~g~~~~~~~~l~~~~~~~~~~~v~~~~~~~~~~~~~~~~~a 384 (492)
...++++.|+...... +.+..+++.+.+.++++++. |.+.+. +.++ .+ .+++.+.+..+.. .+++.|
T Consensus 247 ~~~v~v~~Gs~~~~~~-~~~~~~~~al~~~~~~~v~~~g~~~~~---~~l~----~~-~~~v~~~~~~~~~---~ll~~a 314 (415)
T 3rsc_A 247 LPVVLVSLGTTFNDRP-GFFRDCARAFDGQPWHVVMTLGGQVDP---AALG----DL-PPNVEAHRWVPHV---KVLEQA 314 (415)
T ss_dssp CCEEEEECTTTSCCCH-HHHHHHHHHHTTSSCEEEEECTTTSCG---GGGC----CC-CTTEEEESCCCHH---HHHHHE
T ss_pred CCEEEEECCCCCCChH-HHHHHHHHHHhcCCcEEEEEeCCCCCh---HHhc----CC-CCcEEEEecCCHH---HHHhhC
Confidence 3467778898765432 33333333343345888874 433221 1111 22 3688887666543 678999
Q ss_pred CEEEECCCCCCCchHHHHHhhcCCceEEEecCCCc----ccccccccccccceeeeeecCC--CHHHHHHHHHHHhcCHH
Q 011163 385 DIILCHSFHDPLLQVPLKALKYGAAPIAVTSSDIE----FRHFAEFDHESTRFSRFISSTF--GNISLSQALEEIKNNPL 458 (492)
Q Consensus 385 di~v~pS~~E~~glv~lEAma~G~PvV~~~~~~gg----~~e~v~~~~~~~g~~G~~~~~~--~~~~l~~ai~~~~~~~~ 458 (492)
|++|..+- ..+++|||++|+|+|+... .+ ..+.+. ..+.|..++.. ++++|+++|.++++|++
T Consensus 315 d~~v~~~G----~~t~~Ea~~~G~P~v~~p~--~~~q~~~a~~l~-----~~g~g~~~~~~~~~~~~l~~~i~~ll~~~~ 383 (415)
T 3rsc_A 315 TVCVTHGG----MGTLMEALYWGRPLVVVPQ--SFDVQPMARRVD-----QLGLGAVLPGEKADGDTLLAAVGAVAADPA 383 (415)
T ss_dssp EEEEESCC----HHHHHHHHHTTCCEEECCC--SGGGHHHHHHHH-----HHTCEEECCGGGCCHHHHHHHHHHHHTCHH
T ss_pred CEEEECCc----HHHHHHHHHhCCCEEEeCC--cchHHHHHHHHH-----HcCCEEEcccCCCCHHHHHHHHHHHHcCHH
Confidence 99998763 3678999999999999543 22 233333 23457777765 78999999999999999
Q ss_pred HHHHHHHHHHh--ccCCchhhHHHHHHHHHHH
Q 011163 459 SWKRKIKDAML--QDFSWDADCNDIHISAYTA 488 (492)
Q Consensus 459 ~~~~~~~~a~~--~~fsw~~~a~~~~~~~Y~~ 488 (492)
.++++.+.+.. ...+++.+++.+ ++++.+
T Consensus 384 ~~~~~~~~~~~~~~~~~~~~~~~~i-~~~~~~ 414 (415)
T 3rsc_A 384 LLARVEAMRGHVRRAGGAARAADAV-EAYLAR 414 (415)
T ss_dssp HHHHHHHHHHHHHHSCHHHHHHHHH-HHHHHH
T ss_pred HHHHHHHHHHHHHhcCHHHHHHHHH-HHHhhc
Confidence 88888766654 567888888885 766653
No 43
>2p6p_A Glycosyl transferase; X-RAY-diffraction,urdamycina-biosynthesis; 1.88A {Streptomyces fradiae}
Probab=99.60 E-value=4.6e-13 Score=133.18 Aligned_cols=148 Identities=10% Similarity=-0.027 Sum_probs=102.0
Q ss_pred ceEEEEEeccccc-------cCHHHHHHHHHHHhHcCcEEEEEecCCChhHHHHHHHHHHHhCCCeEEEEeccCHHHHHH
Q 011163 307 TIVVGCIFSDVSD-------VFLENLKAVVRGAKMRGIQFVFTGTNKLPSASRALVSFQEELKDGIVIFVDSYDDALLHL 379 (492)
Q Consensus 307 ~~~i~~~grl~~~-------Kg~~~li~a~~~l~~~~~~lvivG~g~~~~~~~~l~~~~~~~~~~~v~~~~~~~~~~~~~ 379 (492)
..++++.|++... +.+..++++++++ ++++++++ |+ + ..+.++ .+ .++|.+ +..+. .+
T Consensus 211 ~~v~v~~Gs~~~~~~~~~~~~~~~~~~~al~~~---~~~~~~~~-g~-~-~~~~l~----~~-~~~v~~-~~~~~---~~ 275 (384)
T 2p6p_A 211 QRVLVTSGSRVAKESYDRNFDFLRGLAKDLVRW---DVELIVAA-PD-T-VAEALR----AE-VPQARV-GWTPL---DV 275 (384)
T ss_dssp CEEEEECSSSSSCCSSCCCCTTHHHHHHHHHTT---TCEEEEEC-CH-H-HHHHHH----HH-CTTSEE-ECCCH---HH
T ss_pred CEEEEECCCCCccccccccHHHHHHHHHHHhcC---CcEEEEEe-CC-C-CHHhhC----CC-CCceEE-cCCCH---HH
Confidence 4678889998865 5666777777543 68888876 32 1 222222 23 368887 66653 36
Q ss_pred HHhcCCEEEECCCCCCCchHHHHHhhcCCceEEEecCCCc----ccccccccccccceeeeeecCC--CHHHHHHHHHHH
Q 011163 380 IFSGSDIILCHSFHDPLLQVPLKALKYGAAPIAVTSSDIE----FRHFAEFDHESTRFSRFISSTF--GNISLSQALEEI 453 (492)
Q Consensus 380 ~~~~adi~v~pS~~E~~glv~lEAma~G~PvV~~~~~~gg----~~e~v~~~~~~~g~~G~~~~~~--~~~~l~~ai~~~ 453 (492)
+|+.||++|..+ .+.+++|||++|+|+|+... ++ ..+.+. ..+.|+.+++. ++++|+++|+++
T Consensus 276 ~l~~~d~~v~~~----G~~t~~Ea~~~G~P~v~~p~--~~dq~~~a~~~~-----~~g~g~~~~~~~~~~~~l~~~i~~l 344 (384)
T 2p6p_A 276 VAPTCDLLVHHA----GGVSTLTGLSAGVPQLLIPK--GSVLEAPARRVA-----DYGAAIALLPGEDSTEAIADSCQEL 344 (384)
T ss_dssp HGGGCSEEEECS----CTTHHHHHHHTTCCEEECCC--SHHHHHHHHHHH-----HHTSEEECCTTCCCHHHHHHHHHHH
T ss_pred HHhhCCEEEeCC----cHHHHHHHHHhCCCEEEccC--cccchHHHHHHH-----HCCCeEecCcCCCCHHHHHHHHHHH
Confidence 789999999874 34689999999999999876 43 333343 23467888765 688999999999
Q ss_pred hcCHHHHHHHHHHHHh--ccCCchhhHHH
Q 011163 454 KNNPLSWKRKIKDAML--QDFSWDADCND 480 (492)
Q Consensus 454 ~~~~~~~~~~~~~a~~--~~fsw~~~a~~ 480 (492)
++|++.++++.+.+.. ..-.-++++..
T Consensus 345 l~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 373 (384)
T 2p6p_A 345 QAKDTYARRAQDLSREISGMPLPATVVTA 373 (384)
T ss_dssp HHCHHHHHHHHHHHHHHHTSCCHHHHHHH
T ss_pred HcCHHHHHHHHHHHHHHHhCCCHHHHHHH
Confidence 9999988888776654 22234444443
No 44
>4hwg_A UDP-N-acetylglucosamine 2-epimerase; ssgcid, structural genomics, seattle structural genomics center for infectious disease, isomerase; 2.00A {Rickettsia bellii}
Probab=99.54 E-value=5.7e-14 Score=139.20 Aligned_cols=261 Identities=11% Similarity=0.040 Sum_probs=160.8
Q ss_pred HHHHHHHHHcCCCCCEEEEcCchhhhHHHHHHHHHhhcCCCCCcEEEEecCCCCCCCCCchhhhhcCCCccccCCCCccc
Q 011163 125 RASLDYIVKSRKQPDVLHIHNWETAIVGPLFWDIFVKQGLEGTRILLSCHNLNSLCLEHPDKLALCGLDPARLHRPDRLQ 204 (492)
Q Consensus 125 ~~~~~~~~~~~~~pDiVh~h~~~~~~~~~~~~~~~~~~~~~~~~~v~t~H~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 204 (492)
..+.+++++ .+||+|++|...+...+++.++. .++|+++...+... + +. .
T Consensus 84 ~~l~~~l~~--~kPD~Vlv~gd~~~~~aalaA~~------~~IPv~h~eaglrs---~----------~~---------~ 133 (385)
T 4hwg_A 84 EKVDEVLEK--EKPDAVLFYGDTNSCLSAIAAKR------RKIPIFHMEAGNRC---F----------DQ---------R 133 (385)
T ss_dssp HHHHHHHHH--HCCSEEEEESCSGGGGGHHHHHH------TTCCEEEESCCCCC---S----------CT---------T
T ss_pred HHHHHHHHh--cCCcEEEEECCchHHHHHHHHHH------hCCCEEEEeCCCcc---c----------cc---------c
Confidence 444445543 78999999973332232333332 78997644332210 0 00 0
Q ss_pred CCCCCccchhhHHHH-hhcCceeccCccchhhhhhcccCCCccHHHhhhcCCeeeecCC-CCCCCcCCCCCcccccccCc
Q 011163 205 DNTKTHLVNILKGGV-VYSNKVVIVSSMHSKGRIIRSLSHGLESTLAIHQDKLLVAPCG-FDSSTWDPSNDKFLTENYCA 282 (492)
Q Consensus 205 ~~~~~~~~~~~~~~~-~~ad~vi~vS~~~~~~~~~~~~~~~l~~~~~~~~~~~~vI~nG-vd~~~f~p~~~~~~~~~~~~ 282 (492)
+. ....+..+ +.+|.+++.++..++.+.. .| ++++++.++.|. +|...+.
T Consensus 134 ~p-----ee~nR~~~~~~a~~~~~~te~~~~~l~~--~G--------~~~~~I~vtGnp~~D~~~~~------------- 185 (385)
T 4hwg_A 134 VP-----EEINRKIIDHISDVNITLTEHARRYLIA--EG--------LPAELTFKSGSHMPEVLDRF------------- 185 (385)
T ss_dssp ST-----HHHHHHHHHHHCSEEEESSHHHHHHHHH--TT--------CCGGGEEECCCSHHHHHHHH-------------
T ss_pred Cc-----HHHHHHHHHhhhceeecCCHHHHHHHHH--cC--------CCcCcEEEECCchHHHHHHh-------------
Confidence 00 01233343 5688888888887776654 22 145678888774 3321000
Q ss_pred cCccChHHHHHHHHHHhCCCCCCCceEEEEEeccc---cccCHHHHHHHHHHHhHc-CcEEEEEecCCChhHHHHHHHHH
Q 011163 283 EDMKGKTVCKVTLQQQLGLSKDASTIVVGCIFSDV---SDVFLENLKAVVRGAKMR-GIQFVFTGTNKLPSASRALVSFQ 358 (492)
Q Consensus 283 ~~~~~~~~~~~~~~~~lg~~~~~~~~~i~~~grl~---~~Kg~~~li~a~~~l~~~-~~~lvivG~g~~~~~~~~l~~~~ 358 (492)
.....+.++++++|++.+ ..+++..+|.. ..|++..+++|+.++.+. ++++++.. + +...+.+++..
T Consensus 186 ----~~~~~~~~~~~~lgl~~~--~~iLvt~hr~e~~~~~~~l~~ll~al~~l~~~~~~~vv~p~-~--p~~~~~l~~~~ 256 (385)
T 4hwg_A 186 ----MPKILKSDILDKLSLTPK--QYFLISSHREENVDVKNNLKELLNSLQMLIKEYNFLIIFST-H--PRTKKRLEDLE 256 (385)
T ss_dssp ----HHHHHHCCHHHHTTCCTT--SEEEEEECCC-----CHHHHHHHHHHHHHHHHHCCEEEEEE-C--HHHHHHHHTSG
T ss_pred ----hhhcchhHHHHHcCCCcC--CEEEEEeCCchhcCcHHHHHHHHHHHHHHHhcCCeEEEEEC-C--hHHHHHHHHHH
Confidence 011234567888998752 35666677743 347789999999998753 67777755 3 33344444330
Q ss_pred HHhC-CCeEEEEeccCHHHHHHHHhcCCEEEECCCCCCCchHHHHHhhcCCceEEEecCCCcccccccccccccceeeee
Q 011163 359 EELK-DGIVIFVDSYDDALLHLIFSGSDIILCHSFHDPLLQVPLKALKYGAAPIAVTSSDIEFRHFAEFDHESTRFSRFI 437 (492)
Q Consensus 359 ~~~~-~~~v~~~~~~~~~~~~~~~~~adi~v~pS~~E~~glv~lEAma~G~PvV~~~~~~gg~~e~v~~~~~~~g~~G~~ 437 (492)
.... .++|.+.+.....+...+|+.||+++.+| |.+..||+++|+|+|+.+.. .+.+|.++ .| ++.+
T Consensus 257 ~~~~~~~~v~l~~~lg~~~~~~l~~~adlvvt~S-----Ggv~~EA~alG~Pvv~~~~~-ter~e~v~-----~G-~~~l 324 (385)
T 4hwg_A 257 GFKELGDKIRFLPAFSFTDYVKLQMNAFCILSDS-----GTITEEASILNLPALNIREA-HERPEGMD-----AG-TLIM 324 (385)
T ss_dssp GGGGTGGGEEECCCCCHHHHHHHHHHCSEEEECC-----TTHHHHHHHTTCCEEECSSS-CSCTHHHH-----HT-CCEE
T ss_pred HHhcCCCCEEEEcCCCHHHHHHHHHhCcEEEECC-----ccHHHHHHHcCCCEEEcCCC-ccchhhhh-----cC-ceEE
Confidence 0011 25898887777766789999999999887 45679999999999997651 22456554 23 4577
Q ss_pred ecCCCHHHHHHHHHHHhcCHHHHHHHHH
Q 011163 438 SSTFGNISLSQALEEIKNNPLSWKRKIK 465 (492)
Q Consensus 438 ~~~~~~~~l~~ai~~~~~~~~~~~~~~~ 465 (492)
++. |++++.+++..+++|+..+++|++
T Consensus 325 v~~-d~~~i~~ai~~ll~d~~~~~~m~~ 351 (385)
T 4hwg_A 325 SGF-KAERVLQAVKTITEEHDNNKRTQG 351 (385)
T ss_dssp CCS-SHHHHHHHHHHHHTTCBTTBCCSC
T ss_pred cCC-CHHHHHHHHHHHHhChHHHHHhhc
Confidence 753 899999999999999887665543
No 45
>2yjn_A ERYCIII, glycosyltransferase; transferase, cytochrome P450; 3.09A {Saccharopolyspora erythraea}
Probab=99.34 E-value=8.8e-11 Score=118.97 Aligned_cols=155 Identities=10% Similarity=-0.068 Sum_probs=106.8
Q ss_pred ceEEEEEecccc-----ccCHHHHHHHHHHHhHcCcEEEEEecCCChhHHHHHHHHHHHhCCCeEEEEeccCHHHHHHHH
Q 011163 307 TIVVGCIFSDVS-----DVFLENLKAVVRGAKMRGIQFVFTGTNKLPSASRALVSFQEELKDGIVIFVDSYDDALLHLIF 381 (492)
Q Consensus 307 ~~~i~~~grl~~-----~Kg~~~li~a~~~l~~~~~~lvivG~g~~~~~~~~l~~~~~~~~~~~v~~~~~~~~~~~~~~~ 381 (492)
..++++.|+... .+.+..+++++.++ ++++++++.+++ . +.++ .+ .++|.+.+..+. .++|
T Consensus 268 ~~v~v~~Gs~~~~~~~~~~~~~~~~~al~~~---~~~~v~~~g~~~--~-~~l~----~~-~~~v~~~~~~~~---~~ll 333 (441)
T 2yjn_A 268 RRVCLTLGISSRENSIGQVSIEELLGAVGDV---DAEIIATFDAQQ--L-EGVA----NI-PDNVRTVGFVPM---HALL 333 (441)
T ss_dssp CEEEEEC----------CCSTTTTHHHHHTS---SSEEEECCCTTT--T-SSCS----SC-CSSEEECCSCCH---HHHG
T ss_pred CEEEEECCCCcccccChHHHHHHHHHHHHcC---CCEEEEEECCcc--h-hhhc----cC-CCCEEEecCCCH---HHHH
Confidence 457788898765 47888888888654 688888774322 1 1111 23 368888766664 2568
Q ss_pred hcCCEEEECCCCCCCchHHHHHhhcCCceEEEecCCCc----ccccccccccccceeeeeecCC--CHHHHHHHHHHHhc
Q 011163 382 SGSDIILCHSFHDPLLQVPLKALKYGAAPIAVTSSDIE----FRHFAEFDHESTRFSRFISSTF--GNISLSQALEEIKN 455 (492)
Q Consensus 382 ~~adi~v~pS~~E~~glv~lEAma~G~PvV~~~~~~gg----~~e~v~~~~~~~g~~G~~~~~~--~~~~l~~ai~~~~~ 455 (492)
..||++|.. +.+.+++|||++|+|+|+... ++ ..+.+. +.+.|+.+++. ++++|+++|..+++
T Consensus 334 ~~ad~~V~~----~G~~t~~Ea~~~G~P~i~~p~--~~dQ~~na~~l~-----~~g~g~~~~~~~~~~~~l~~~i~~ll~ 402 (441)
T 2yjn_A 334 PTCAATVHH----GGPGSWHTAAIHGVPQVILPD--GWDTGVRAQRTQ-----EFGAGIALPVPELTPDQLRESVKRVLD 402 (441)
T ss_dssp GGCSEEEEC----CCHHHHHHHHHTTCCEEECCC--SHHHHHHHHHHH-----HHTSEEECCTTTCCHHHHHHHHHHHHH
T ss_pred hhCCEEEEC----CCHHHHHHHHHhCCCEEEeCC--cccHHHHHHHHH-----HcCCEEEcccccCCHHHHHHHHHHHhc
Confidence 999999974 445789999999999999876 43 222333 23457888765 78899999999999
Q ss_pred CHHHHHHHHHHHHh--ccCCchhhHHHHHHHHHH
Q 011163 456 NPLSWKRKIKDAML--QDFSWDADCNDIHISAYT 487 (492)
Q Consensus 456 ~~~~~~~~~~~a~~--~~fsw~~~a~~~~~~~Y~ 487 (492)
|++.++++.+.+.. ...+++.+++.+ +++..
T Consensus 403 ~~~~~~~~~~~~~~~~~~~~~~~~~~~i-~~~~~ 435 (441)
T 2yjn_A 403 DPAHRAGAARMRDDMLAEPSPAEVVGIC-EELAA 435 (441)
T ss_dssp CHHHHHHHHHHHHHHHTSCCHHHHHHHH-HHHHH
T ss_pred CHHHHHHHHHHHHHHHcCCCHHHHHHHH-HHHHH
Confidence 99988888776654 567888888875 66654
No 46
>2iya_A OLEI, oleandomycin glycosyltransferase; carbohydrate, glycosylation, enzyme, macrolide; HET: UDP ZIO; 1.7A {Streptomyces antibioticus}
Probab=99.34 E-value=7.1e-10 Score=111.62 Aligned_cols=157 Identities=13% Similarity=0.009 Sum_probs=100.7
Q ss_pred CceEEEEEeccccccCHHHHHHHHHHHhHcCcEEEE-EecCCChhHHHHHHHHHHHhCCCeEEEEeccCHHHHHHHHhcC
Q 011163 306 STIVVGCIFSDVSDVFLENLKAVVRGAKMRGIQFVF-TGTNKLPSASRALVSFQEELKDGIVIFVDSYDDALLHLIFSGS 384 (492)
Q Consensus 306 ~~~~i~~~grl~~~Kg~~~li~a~~~l~~~~~~lvi-vG~g~~~~~~~~l~~~~~~~~~~~v~~~~~~~~~~~~~~~~~a 384 (492)
...++++.|+.. .+..+.+.++++.+.+.++++++ +|.+.+. +.++ .+ .+++.+.+..++. ++|+.|
T Consensus 255 ~~~v~v~~Gs~~-~~~~~~~~~~~~al~~~~~~~~~~~g~~~~~---~~~~----~~-~~~v~~~~~~~~~---~~l~~~ 322 (424)
T 2iya_A 255 RPVLLIALGSAF-TDHLDFYRTCLSAVDGLDWHVVLSVGRFVDP---ADLG----EV-PPNVEVHQWVPQL---DILTKA 322 (424)
T ss_dssp CCEEEEECCSSS-CCCHHHHHHHHHHHTTCSSEEEEECCTTSCG---GGGC----SC-CTTEEEESSCCHH---HHHTTC
T ss_pred CCEEEEEcCCCC-cchHHHHHHHHHHHhcCCcEEEEEECCcCCh---HHhc----cC-CCCeEEecCCCHH---HHHhhC
Confidence 346777889876 34444444445555445678754 5644321 1111 23 3688887666543 679999
Q ss_pred CEEEECCCCCCCchHHHHHhhcCCceEEEecCCCc----ccccccccccccceeeeeecCC--CHHHHHHHHHHHhcCHH
Q 011163 385 DIILCHSFHDPLLQVPLKALKYGAAPIAVTSSDIE----FRHFAEFDHESTRFSRFISSTF--GNISLSQALEEIKNNPL 458 (492)
Q Consensus 385 di~v~pS~~E~~glv~lEAma~G~PvV~~~~~~gg----~~e~v~~~~~~~g~~G~~~~~~--~~~~l~~ai~~~~~~~~ 458 (492)
|++|..+ -..+++||+++|+|+|+... .+ ..+.+. ..+.|+.++.. ++++++++|+++++|++
T Consensus 323 d~~v~~~----G~~t~~Ea~~~G~P~i~~p~--~~dQ~~na~~l~-----~~g~g~~~~~~~~~~~~l~~~i~~ll~~~~ 391 (424)
T 2iya_A 323 SAFITHA----GMGSTMEALSNAVPMVAVPQ--IAEQTMNAERIV-----ELGLGRHIPRDQVTAEKLREAVLAVASDPG 391 (424)
T ss_dssp SEEEECC----CHHHHHHHHHTTCCEEECCC--SHHHHHHHHHHH-----HTTSEEECCGGGCCHHHHHHHHHHHHHCHH
T ss_pred CEEEECC----chhHHHHHHHcCCCEEEecC--ccchHHHHHHHH-----HCCCEEEcCcCCCCHHHHHHHHHHHHcCHH
Confidence 9999753 24789999999999999865 32 112222 12357777654 78899999999999998
Q ss_pred HHHHHHHHHHh--ccCCchhhHHHHHHHHH
Q 011163 459 SWKRKIKDAML--QDFSWDADCNDIHISAY 486 (492)
Q Consensus 459 ~~~~~~~~a~~--~~fsw~~~a~~~~~~~Y 486 (492)
.++++.+.+.. .....+.+++.+ +++.
T Consensus 392 ~~~~~~~~~~~~~~~~~~~~~~~~i-~~~~ 420 (424)
T 2iya_A 392 VAERLAAVRQEIREAGGARAAADIL-EGIL 420 (424)
T ss_dssp HHHHHHHHHHHHHTSCHHHHHHHHH-HHHH
T ss_pred HHHHHHHHHHHHHhcCcHHHHHHHH-HHHH
Confidence 77777665543 344556666664 5444
No 47
>3h4t_A Glycosyltransferase GTFA, glycosyltransferase; vancomycin, teicoplanin, ORF1, natural products, antibiotic; HET: UDP; 1.15A {Amycolatopsis orientalis} SCOP: c.87.1.5 PDB: 3h4i_A* 1pn3_A* 1pnv_A*
Probab=99.34 E-value=2.5e-10 Score=114.27 Aligned_cols=157 Identities=13% Similarity=0.006 Sum_probs=100.1
Q ss_pred ceEEEEEeccc-cccCHHHHHHHHHHHhHcCcEEEEEecCCChhHHHHHHHHHHHhCCCeEEEEeccCHHHHHHHHhcCC
Q 011163 307 TIVVGCIFSDV-SDVFLENLKAVVRGAKMRGIQFVFTGTNKLPSASRALVSFQEELKDGIVIFVDSYDDALLHLIFSGSD 385 (492)
Q Consensus 307 ~~~i~~~grl~-~~Kg~~~li~a~~~l~~~~~~lvivG~g~~~~~~~~l~~~~~~~~~~~v~~~~~~~~~~~~~~~~~ad 385 (492)
.+++++.|+.. ..+.+..++++++++ +.++++.+...+.. .+ .. .+++.+.+..+. ..++..||
T Consensus 222 ~~Vlv~~Gs~~~~~~~~~~~~~al~~~---~~~vv~~~g~~~~~---~~-----~~-~~~v~~~~~~~~---~~ll~~~d 286 (404)
T 3h4t_A 222 PPVYVGFGSGPAPAEAARVAIEAVRAQ---GRRVVLSSGWAGLG---RI-----DE-GDDCLVVGEVNH---QVLFGRVA 286 (404)
T ss_dssp CCEEECCTTSCCCTTHHHHHHHHHHHT---TCCEEEECTTTTCC---CS-----SC-CTTEEEESSCCH---HHHGGGSS
T ss_pred CeEEEECCCCCCcHHHHHHHHHHHHhC---CCEEEEEeCCcccc---cc-----cC-CCCEEEecCCCH---HHHHhhCc
Confidence 46777889887 666666677776654 67888776222111 00 12 368888866654 35789999
Q ss_pred EEEECCCCCCCchHHHHHhhcCCceEEEecCCCcccccccccccccceeeeeecCC--CHHHHHHHHHHHhcCHHHHHHH
Q 011163 386 IILCHSFHDPLLQVPLKALKYGAAPIAVTSSDIEFRHFAEFDHESTRFSRFISSTF--GNISLSQALEEIKNNPLSWKRK 463 (492)
Q Consensus 386 i~v~pS~~E~~glv~lEAma~G~PvV~~~~~~gg~~e~v~~~~~~~g~~G~~~~~~--~~~~l~~ai~~~~~~~~~~~~~ 463 (492)
++|..+- ..+..||+++|+|+|+... ++-....-...+ ..+.|..++.. +++.|.+++.++++ ++.++++
T Consensus 287 ~~v~~gG----~~t~~Eal~~GvP~v~~p~--~~dQ~~na~~~~-~~G~g~~l~~~~~~~~~l~~ai~~ll~-~~~~~~~ 358 (404)
T 3h4t_A 287 AVVHHGG----AGTTTAVTRAGAPQVVVPQ--KADQPYYAGRVA-DLGVGVAHDGPTPTVESLSAALATALT-PGIRARA 358 (404)
T ss_dssp EEEECCC----HHHHHHHHHHTCCEEECCC--STTHHHHHHHHH-HHTSEEECSSSSCCHHHHHHHHHHHTS-HHHHHHH
T ss_pred EEEECCc----HHHHHHHHHcCCCEEEcCC--cccHHHHHHHHH-HCCCEeccCcCCCCHHHHHHHHHHHhC-HHHHHHH
Confidence 9997753 3688999999999999765 332211100000 12346776543 68899999999998 8877777
Q ss_pred HHHHHh-ccCCchhhHHHHHHHHHH
Q 011163 464 IKDAML-QDFSWDADCNDIHISAYT 487 (492)
Q Consensus 464 ~~~a~~-~~fsw~~~a~~~~~~~Y~ 487 (492)
.+.+.. ..-.++.+++.+ +.++.
T Consensus 359 ~~~~~~~~~~~~~~~~~~i-~~~~~ 382 (404)
T 3h4t_A 359 AAVAGTIRTDGTTVAAKLL-LEAIS 382 (404)
T ss_dssp HHHHTTCCCCHHHHHHHHH-HHHHH
T ss_pred HHHHHHHhhhHHHHHHHHH-HHHHh
Confidence 665543 224566666664 55543
No 48
>3q3e_A HMW1C-like glycosyltransferase; N-glycosylation; 2.10A {Actinobacillus pleuropneumoniae serovaorganism_taxid} PDB: 3q3h_A* 3q3i_A
Probab=99.22 E-value=8.5e-11 Score=120.30 Aligned_cols=183 Identities=7% Similarity=-0.013 Sum_probs=120.1
Q ss_pred HhCCCCCCCceEEEEEeccccccCHHHHHHHHHHHhHc--CcEEE--EEecCCChhHHHHHHHHHH-HhCCCeEEEEecc
Q 011163 298 QLGLSKDASTIVVGCIFSDVSDVFLENLKAVVRGAKMR--GIQFV--FTGTNKLPSASRALVSFQE-ELKDGIVIFVDSY 372 (492)
Q Consensus 298 ~lg~~~~~~~~~i~~~grl~~~Kg~~~li~a~~~l~~~--~~~lv--ivG~g~~~~~~~~l~~~~~-~~~~~~v~~~~~~ 372 (492)
.+|++.+.+.++|++..+. .|..+.+++++.++.+. +..|+ ++|.+. ......+++.++ .. .+++.|.+..
T Consensus 432 ~~~lp~~~G~v~Fg~fn~~--~Ki~p~~l~~WarIL~~vP~s~L~l~~~g~~~-g~~~~~~~~~~~~GI-~~Rv~F~g~~ 507 (631)
T 3q3e_A 432 DYLLRENPEVVNIGIASTT--MKLNPYFLEALKAIRDRAKVKVHFHFALGQSN-GITHPYVERFIKSYL-GDSATAHPHS 507 (631)
T ss_dssp CCCCCSCCSEEEEEEEECS--TTCCHHHHHHHHHHHHHCSSEEEEEEEESSCC-GGGHHHHHHHHHHHH-GGGEEEECCC
T ss_pred cccCCcCCCeEEEEECCcc--ccCCHHHHHHHHHHHHhCCCcEEEEEecCCCc-hhhHHHHHHHHHcCC-CccEEEcCCC
Confidence 3566654446788888885 57788999999988863 44443 356321 112233333222 23 2699999888
Q ss_pred CHHHHHHHHhcCCEEEECCCCCCCchHHHHHhhcCCceEEEecCCCccccccccccc-ccceeeeeecCCCHHHHHHHHH
Q 011163 373 DDALLHLIFSGSDIILCHSFHDPLLQVPLKALKYGAAPIAVTSSDIEFRHFAEFDHE-STRFSRFISSTFGNISLSQALE 451 (492)
Q Consensus 373 ~~~~~~~~~~~adi~v~pS~~E~~glv~lEAma~G~PvV~~~~~~gg~~e~v~~~~~-~~g~~G~~~~~~~~~~l~~ai~ 451 (492)
+.++....|+.||+++-|+.+++ |++.+|||+||+|||+..- .++..-+..... ..|..++++ ..+.+++.+...
T Consensus 508 p~~e~la~y~~aDIfLDpfpy~G-gtTtlEALwmGVPVVTl~G--~~~asRvgaSlL~~~GLpE~LI-A~d~eeYv~~Av 583 (631)
T 3q3e_A 508 PYHQYLRILHNCDMMVNPFPFGN-TNGIIDMVTLGLVGVCKTG--AEVHEHIDEGLFKRLGLPEWLI-ANTVDEYVERAV 583 (631)
T ss_dssp CHHHHHHHHHTCSEEECCSSSCC-SHHHHHHHHTTCCEEEECC--SSHHHHHHHHHHHHTTCCGGGE-ESSHHHHHHHHH
T ss_pred CHHHHHHHHhcCcEEEeCCcccC-ChHHHHHHHcCCCEEeccC--CcHHHHhHHHHHHhcCCCccee-cCCHHHHHHHHH
Confidence 88777789999999999998755 9999999999999998654 333333321000 013334433 246889999999
Q ss_pred HHhcCHHHHHHHHHHHHhc---cCCchhhHHHHHHHHHHHH
Q 011163 452 EIKNNPLSWKRKIKDAMLQ---DFSWDADCNDIHISAYTAI 489 (492)
Q Consensus 452 ~~~~~~~~~~~~~~~a~~~---~fsw~~~a~~~~~~~Y~~l 489 (492)
++.+|++.+++++++.+.. ..-|+..+++ |++.|+++
T Consensus 584 ~La~D~~~l~~LR~~Lr~~~~~spLFd~~~~~-~e~~ye~~ 623 (631)
T 3q3e_A 584 RLAENHQERLELRRYIIENNGLNTLFTGDPRP-MGQVFLEK 623 (631)
T ss_dssp HHHHCHHHHHHHHHHHHHSCCHHHHTCSCCTH-HHHHHHHH
T ss_pred HHhCCHHHHHHHHHHHHHHhhhCCCcchhHHH-HHHHHHHH
Confidence 9999999999998887652 1122344555 35555544
No 49
>4amg_A Snogd; transferase, polyketide biosynthesis, GT1 family, nogalamyci; HET: MLY; 2.59A {Streptomyces nogalater} PDB: 4an4_A* 4amb_A*
Probab=99.11 E-value=3.5e-09 Score=105.53 Aligned_cols=152 Identities=12% Similarity=-0.019 Sum_probs=92.0
Q ss_pred CceEEEEEeccccccC-HHHHHHHHHHHhHcCcEEEEEecCCChhHHHHHHHHHHHhCCCeEEEEeccCHHHHHHHHhcC
Q 011163 306 STIVVGCIFSDVSDVF-LENLKAVVRGAKMRGIQFVFTGTNKLPSASRALVSFQEELKDGIVIFVDSYDDALLHLIFSGS 384 (492)
Q Consensus 306 ~~~~i~~~grl~~~Kg-~~~li~a~~~l~~~~~~lvivG~g~~~~~~~~l~~~~~~~~~~~v~~~~~~~~~~~~~~~~~a 384 (492)
...++++.|++...++ ...+.++++.+.+.+.++++.+.+.+... ...+ .+++.+....+.. +++..|
T Consensus 237 ~~~v~vs~Gs~~~~~~~~~~~~~~~~~l~~~~~~~v~~~~~~~~~~-------~~~~-~~~v~~~~~~p~~---~lL~~~ 305 (400)
T 4amg_A 237 RRRIAVTLGSIDALSGGIAKLAPLFSEVADVDAEFVLTLGGGDLAL-------LGEL-PANVRVVEWIPLG---ALLETC 305 (400)
T ss_dssp CCEEEECCCSCC--CCSSSTTHHHHHHGGGSSSEEEEECCTTCCCC-------CCCC-CTTEEEECCCCHH---HHHTTC
T ss_pred CcEEEEeCCcccccCccHHHHHHHHHHhhccCceEEEEecCccccc-------cccC-CCCEEEEeecCHH---HHhhhh
Confidence 3456777788765443 34556666666666788888764432110 0122 3788877666643 568999
Q ss_pred CEEEECCCCCCCchHHHHHhhcCCceEEEecCCCcc----cccccccccccceeeeeecCCCHHHHHHHHHHHhcCHHHH
Q 011163 385 DIILCHSFHDPLLQVPLKALKYGAAPIAVTSSDIEF----RHFAEFDHESTRFSRFISSTFGNISLSQALEEIKNNPLSW 460 (492)
Q Consensus 385 di~v~pS~~E~~glv~lEAma~G~PvV~~~~~~gg~----~e~v~~~~~~~g~~G~~~~~~~~~~l~~ai~~~~~~~~~~ 460 (492)
|+||.- +-..+++||+++|+|+|+... .+= .+.++ ..+.|..++..+ .++++|+++++||+.+
T Consensus 306 ~~~v~h----~G~~s~~Eal~~GvP~v~~P~--~~dQ~~na~~v~-----~~G~g~~l~~~~--~~~~al~~lL~d~~~r 372 (400)
T 4amg_A 306 DAIIHH----GGSGTLLTALAAGVPQCVIPH--GSYQDTNRDVLT-----GLGIGFDAEAGS--LGAEQCRRLLDDAGLR 372 (400)
T ss_dssp SEEEEC----CCHHHHHHHHHHTCCEEECCC-----CHHHHHHHH-----HHTSEEECCTTT--CSHHHHHHHHHCHHHH
T ss_pred hheecc----CCccHHHHHHHhCCCEEEecC--cccHHHHHHHHH-----HCCCEEEcCCCC--chHHHHHHHHcCHHHH
Confidence 999864 445789999999999999655 331 11222 123466665544 5688999999999877
Q ss_pred HHHHHHHHh--ccCCchhhHHHH
Q 011163 461 KRKIKDAML--QDFSWDADCNDI 481 (492)
Q Consensus 461 ~~~~~~a~~--~~fsw~~~a~~~ 481 (492)
++..+-+.+ ..=+-...++.+
T Consensus 373 ~~a~~l~~~~~~~~~~~~~a~~l 395 (400)
T 4amg_A 373 EAALRVRQEMSEMPPPAETAAXL 395 (400)
T ss_dssp HHHHHHHHHHHTSCCHHHHHHHH
T ss_pred HHHHHHHHHHHcCCCHHHHHHHH
Confidence 665443332 222455555553
No 50
>1iir_A Glycosyltransferase GTFB; rossmann fold; 1.80A {Amycolatopsis orientalis} SCOP: c.87.1.5
Probab=99.06 E-value=3.2e-08 Score=99.20 Aligned_cols=135 Identities=16% Similarity=0.069 Sum_probs=91.7
Q ss_pred ceEEEEEecc-ccccCHHHHHHHHHHHhHcCcEEEEE-ecCCChhHHHHHHHHHHHhCCCeEEEEeccCHHHHHHHHhcC
Q 011163 307 TIVVGCIFSD-VSDVFLENLKAVVRGAKMRGIQFVFT-GTNKLPSASRALVSFQEELKDGIVIFVDSYDDALLHLIFSGS 384 (492)
Q Consensus 307 ~~~i~~~grl-~~~Kg~~~li~a~~~l~~~~~~lviv-G~g~~~~~~~~l~~~~~~~~~~~v~~~~~~~~~~~~~~~~~a 384 (492)
..++++.|+. ...+..+.++++++++ +.+++++ |.++. . . ..+ .+++.+.+..+.. +++..|
T Consensus 239 ~~v~v~~Gs~~~~~~~~~~~~~al~~~---~~~~v~~~g~~~~-~----~----~~~-~~~v~~~~~~~~~---~~l~~~ 302 (415)
T 1iir_A 239 PPVYLGFGSLGAPADAVRVAIDAIRAH---GRRVILSRGWADL-V----L----PDD-GADCFAIGEVNHQ---VLFGRV 302 (415)
T ss_dssp CCEEEECC---CCHHHHHHHHHHHHHT---TCCEEECTTCTTC-C----C----SSC-GGGEEECSSCCHH---HHGGGS
T ss_pred CeEEEeCCCCCCcHHHHHHHHHHHHHC---CCeEEEEeCCCcc-c----c----cCC-CCCEEEeCcCChH---HHHhhC
Confidence 3577888998 5788888888888765 4567665 63321 1 0 122 2588877666653 457999
Q ss_pred CEEEECCCCCCCchHHHHHhhcCCceEEEecCCCc----ccccccccccccceeeeeecCC--CHHHHHHHHHHHhcCHH
Q 011163 385 DIILCHSFHDPLLQVPLKALKYGAAPIAVTSSDIE----FRHFAEFDHESTRFSRFISSTF--GNISLSQALEEIKNNPL 458 (492)
Q Consensus 385 di~v~pS~~E~~glv~lEAma~G~PvV~~~~~~gg----~~e~v~~~~~~~g~~G~~~~~~--~~~~l~~ai~~~~~~~~ 458 (492)
|++|..+ -..+++|||++|+|+|+... .+ ..+.++ ..+.|..++.. ++++++++|+++ +|++
T Consensus 303 d~~v~~~----G~~t~~Ea~~~G~P~i~~p~--~~dQ~~na~~l~-----~~g~g~~~~~~~~~~~~l~~~i~~l-~~~~ 370 (415)
T 1iir_A 303 AAVIHHG----GAGTTHVAARAGAPQILLPQ--MADQPYYAGRVA-----ELGVGVAHDGPIPTFDSLSAALATA-LTPE 370 (415)
T ss_dssp SEEEECC----CHHHHHHHHHHTCCEEECCC--STTHHHHHHHHH-----HHTSEEECSSSSCCHHHHHHHHHHH-TSHH
T ss_pred CEEEeCC----ChhHHHHHHHcCCCEEECCC--CCccHHHHHHHH-----HCCCcccCCcCCCCHHHHHHHHHHH-cCHH
Confidence 9999864 23789999999999999765 43 122232 23357777653 788999999999 9988
Q ss_pred HHHHHHHHHHh
Q 011163 459 SWKRKIKDAML 469 (492)
Q Consensus 459 ~~~~~~~~a~~ 469 (492)
.++++.+.+..
T Consensus 371 ~~~~~~~~~~~ 381 (415)
T 1iir_A 371 THARATAVAGT 381 (415)
T ss_dssp HHHHHHHHHHH
T ss_pred HHHHHHHHHHH
Confidence 77777665543
No 51
>2o6l_A UDP-glucuronosyltransferase 2B7; drug metabolism, rossman, MAD, enzyme, nucleotide binding, sugar,UDP-glucuronosyltransferase, UGT; 1.80A {Homo sapiens}
Probab=99.01 E-value=1.4e-09 Score=94.68 Aligned_cols=130 Identities=12% Similarity=0.046 Sum_probs=92.8
Q ss_pred ceEEEEEeccc---cccCHHHHHHHHHHHhHcCcEEEEEecCCChhHHHHHHHHHHHhCCCeEEEEeccCHHHHHHHH--
Q 011163 307 TIVVGCIFSDV---SDVFLENLKAVVRGAKMRGIQFVFTGTNKLPSASRALVSFQEELKDGIVIFVDSYDDALLHLIF-- 381 (492)
Q Consensus 307 ~~~i~~~grl~---~~Kg~~~li~a~~~l~~~~~~lvivG~g~~~~~~~~l~~~~~~~~~~~v~~~~~~~~~~~~~~~-- 381 (492)
..++++.|++. +.|.+..++++++++ +.++++++++...+ .+ .++|.+.+..+.++ ++
T Consensus 22 ~~vlv~~Gs~~~~~~~~~~~~~~~al~~~---~~~~~~~~g~~~~~----------~~-~~~v~~~~~~~~~~---~l~~ 84 (170)
T 2o6l_A 22 GVVVFSLGSMVSNMTEERANVIASALAQI---PQKVLWRFDGNKPD----------TL-GLNTRLYKWIPQND---LLGH 84 (170)
T ss_dssp CEEEEECCSCCTTCCHHHHHHHHHHHTTS---SSEEEEECCSSCCT----------TC-CTTEEEESSCCHHH---HHTS
T ss_pred CEEEEECCCCcccCCHHHHHHHHHHHHhC---CCeEEEEECCcCcc----------cC-CCcEEEecCCCHHH---HhcC
Confidence 46788899985 677777777777544 57888887443211 23 36898887776643 45
Q ss_pred hcCCEEEECCCCCCCchHHHHHhhcCCceEEEecCCCc----ccccccccccccceeeeeecCC--CHHHHHHHHHHHhc
Q 011163 382 SGSDIILCHSFHDPLLQVPLKALKYGAAPIAVTSSDIE----FRHFAEFDHESTRFSRFISSTF--GNISLSQALEEIKN 455 (492)
Q Consensus 382 ~~adi~v~pS~~E~~glv~lEAma~G~PvV~~~~~~gg----~~e~v~~~~~~~g~~G~~~~~~--~~~~l~~ai~~~~~ 455 (492)
+.||++|.. +.+.+++|||++|+|+|+... .+ ..+.+. ..+.|+++++. ++++|+++|..+++
T Consensus 85 ~~ad~~I~~----~G~~t~~Ea~~~G~P~i~~p~--~~~Q~~na~~l~-----~~g~g~~~~~~~~~~~~l~~~i~~ll~ 153 (170)
T 2o6l_A 85 PKTRAFITH----GGANGIYEAIYHGIPMVGIPL--FADQPDNIAHMK-----ARGAAVRVDFNTMSSTDLLNALKRVIN 153 (170)
T ss_dssp TTEEEEEEC----CCHHHHHHHHHHTCCEEECCC--STTHHHHHHHHH-----TTTSEEECCTTTCCHHHHHHHHHHHHH
T ss_pred CCcCEEEEc----CCccHHHHHHHcCCCEEeccc--hhhHHHHHHHHH-----HcCCeEEeccccCCHHHHHHHHHHHHc
Confidence 899999975 346899999999999999876 32 122332 23468888766 78899999999999
Q ss_pred CHHHHHHHH
Q 011163 456 NPLSWKRKI 464 (492)
Q Consensus 456 ~~~~~~~~~ 464 (492)
|++.++++.
T Consensus 154 ~~~~~~~a~ 162 (170)
T 2o6l_A 154 DPSYKENVM 162 (170)
T ss_dssp CHHHHHHHH
T ss_pred CHHHHHHHH
Confidence 987555443
No 52
>1rrv_A Glycosyltransferase GTFD; GT-B, glycosyltransferase, rossmann fold, glycopeptide, VACO antibiotic, transferase-antibiotic complex; HET: OMZ GHP OMY 3FG TYD BGC; 2.00A {Amycolatopsis orientalis} SCOP: c.87.1.5
Probab=98.97 E-value=1.3e-07 Score=94.76 Aligned_cols=134 Identities=15% Similarity=0.028 Sum_probs=90.3
Q ss_pred ceEEEEEeccc---cccCHHHHHHHHHHHhHcCcEEEEE-ecCCChhHHHHHHHHHHHhCCCeEEEEeccCHHHHHHHHh
Q 011163 307 TIVVGCIFSDV---SDVFLENLKAVVRGAKMRGIQFVFT-GTNKLPSASRALVSFQEELKDGIVIFVDSYDDALLHLIFS 382 (492)
Q Consensus 307 ~~~i~~~grl~---~~Kg~~~li~a~~~l~~~~~~lviv-G~g~~~~~~~~l~~~~~~~~~~~v~~~~~~~~~~~~~~~~ 382 (492)
..++++.|+.. ..+....++++++++ +.+++++ |.+.. . . ..+ .+++.+.+..+. .+++.
T Consensus 238 ~~v~v~~Gs~~~~~~~~~~~~~~~al~~~---~~~~v~~~g~~~~-~----~----~~~-~~~v~~~~~~~~---~~ll~ 301 (416)
T 1rrv_A 238 PPVHIGFGSSSGRGIADAAKVAVEAIRAQ---GRRVILSRGWTEL-V----L----PDD-RDDCFAIDEVNF---QALFR 301 (416)
T ss_dssp CCEEECCTTCCSHHHHHHHHHHHHHHHHT---TCCEEEECTTTTC-C----C----SCC-CTTEEEESSCCH---HHHGG
T ss_pred CeEEEecCCCCccChHHHHHHHHHHHHHC---CCeEEEEeCCccc-c----c----cCC-CCCEEEeccCCh---HHHhc
Confidence 35677889874 456666677777654 5677776 53321 1 1 123 368887766664 35689
Q ss_pred cCCEEEECCCCCCCchHHHHHhhcCCceEEEecCCCcc----cccccccccccceeeeeecC--CCHHHHHHHHHHHhcC
Q 011163 383 GSDIILCHSFHDPLLQVPLKALKYGAAPIAVTSSDIEF----RHFAEFDHESTRFSRFISST--FGNISLSQALEEIKNN 456 (492)
Q Consensus 383 ~adi~v~pS~~E~~glv~lEAma~G~PvV~~~~~~gg~----~e~v~~~~~~~g~~G~~~~~--~~~~~l~~ai~~~~~~ 456 (492)
.||++|.. +-..+++||+++|+|+|+... .+= .+.++ ..+.|..++. .++++++++|+++ +|
T Consensus 302 ~~d~~v~~----~G~~t~~Ea~~~G~P~i~~p~--~~dQ~~na~~l~-----~~g~g~~~~~~~~~~~~l~~~i~~l-~~ 369 (416)
T 1rrv_A 302 RVAAVIHH----GSAGTEHVATRAGVPQLVIPR--NTDQPYFAGRVA-----ALGIGVAHDGPTPTFESLSAALTTV-LA 369 (416)
T ss_dssp GSSEEEEC----CCHHHHHHHHHHTCCEEECCC--SBTHHHHHHHHH-----HHTSEEECSSSCCCHHHHHHHHHHH-TS
T ss_pred cCCEEEec----CChhHHHHHHHcCCCEEEccC--CCCcHHHHHHHH-----HCCCccCCCCCCCCHHHHHHHHHHh-hC
Confidence 99999974 335699999999999999765 321 11222 2335677754 4778999999999 99
Q ss_pred HHHHHHHHHHHH
Q 011163 457 PLSWKRKIKDAM 468 (492)
Q Consensus 457 ~~~~~~~~~~a~ 468 (492)
++.++++.+.+.
T Consensus 370 ~~~~~~~~~~~~ 381 (416)
T 1rrv_A 370 PETRARAEAVAG 381 (416)
T ss_dssp HHHHHHHHHHTT
T ss_pred HHHHHHHHHHHH
Confidence 987777766544
No 53
>1ygp_A Yeast glycogen phosphorylase; phosphorylated form, glycosyltransferase; HET: PLP; 2.80A {Saccharomyces cerevisiae} SCOP: c.87.1.4
Probab=98.52 E-value=9.8e-07 Score=92.20 Aligned_cols=219 Identities=16% Similarity=0.124 Sum_probs=144.0
Q ss_pred cchhhHHHHhhcCceeccCccchhhhhhcccCCCccHHHhhhcC-CeeeecCCCCCCCcC----CCCCccc----c---c
Q 011163 211 LVNILKGGVVYSNKVVIVSSMHSKGRIIRSLSHGLESTLAIHQD-KLLVAPCGFDSSTWD----PSNDKFL----T---E 278 (492)
Q Consensus 211 ~~~~~~~~~~~ad~vi~vS~~~~~~~~~~~~~~~l~~~~~~~~~-~~~vI~nGvd~~~f~----p~~~~~~----~---~ 278 (492)
.+++...++..|..|..||.-+.+-+....+ .......+. ++.-+.|||...+|. |.-...+ . .
T Consensus 467 ~v~MA~LAi~~S~~vNGVs~LH~ev~k~~~f----~df~~l~P~~kf~n~TNGVt~rrWl~~~Np~L~~Li~~~iG~~~~ 542 (879)
T 1ygp_A 467 QIRMAFLAIVGSHKVNGVVELHSELIKTTIF----KDFIKFYGPSKFVNVTNGITPRRWLKQANPSLAKLISETLNDPTE 542 (879)
T ss_dssp EEEHHHHHHHHEEEEEESSHHHHHHHHHTTT----HHHHHHHCGGGEEECCCCBCHHHHTTTTCHHHHHHHHHHTTCTTC
T ss_pred eeehHHHHHHhcCceeEehHHHHHHHHHHHh----HHHHHhCCCCcccCcCCCcCCchhhhhcCHHHHHHHHHhcCCChh
Confidence 4677888899999999999877765433322 112223456 999999999766663 2210000 0 0
Q ss_pred c--cC----------ccC-------ccChHHHHH----HHHHHh-CCCCC-----CCceEEEEEeccccccCHHH-HHHH
Q 011163 279 N--YC----------AED-------MKGKTVCKV----TLQQQL-GLSKD-----ASTIVVGCIFSDVSDVFLEN-LKAV 328 (492)
Q Consensus 279 ~--~~----------~~~-------~~~~~~~~~----~~~~~l-g~~~~-----~~~~~i~~~grl~~~Kg~~~-li~a 328 (492)
. .+ ++| .+-+..+|. .++++. |+.-+ +..+..+++-|+.++|...+ ++..
T Consensus 543 ~W~~d~~~L~~l~~~~~D~~f~~~l~~iK~~nK~~La~~i~~~~~g~~ld~~~~~p~sLfdvq~KR~heYKRq~LniL~i 622 (879)
T 1ygp_A 543 EYLLDMAKLTQLEKYVEDKEFLKKWNQVKLNNKIRLVDLIKKENDGVDIINREYLDDTLFDMQVKRIHEYKRQQLNVFGI 622 (879)
T ss_dssp GGGTCGGGGGGGGGGGGCTHHHHHHHHHHHHHHHHHHHHHHHTTTTCCCSCSTTGGGCEEEEEESCCCGGGTHHHHHHHH
T ss_pred hhhhCHHHHHHHHhhCCcHHHHHHHHHHHHHHHHHHHHHHHHHcCCcEecCCCCCCCeeeeeeeehhhHhHHHHHHHHHH
Confidence 0 00 011 011112222 245567 88877 77889999999999999988 6666
Q ss_pred HHHH---hH---------------cCcEEEEEecCCCh--hHHH----HHHHHHHHhC-----CC--eEEEEeccCHHHH
Q 011163 329 VRGA---KM---------------RGIQFVFTGTNKLP--SASR----ALVSFQEELK-----DG--IVIFVDSYDDALL 377 (492)
Q Consensus 329 ~~~l---~~---------------~~~~lvivG~g~~~--~~~~----~l~~~~~~~~-----~~--~v~~~~~~~~~~~ 377 (492)
+.++ +. .+.++++.|. ..| .... .+..+++..+ .+ +|.|+..|+-...
T Consensus 623 i~ry~~Ik~~~~~~~~p~~~~~~~~P~~~IFaGK-AaP~y~~aK~iIklI~~va~~iN~Dp~v~~~LKVVFlenY~VslA 701 (879)
T 1ygp_A 623 IYRYLAMKNMLKNGASIEEVARKYPRKVSIFGGK-SAPGYYMAKLIIKLINCVADIVNNDESIEHLLKVVFVADYNVSKA 701 (879)
T ss_dssp HHHHHHHHHHHHTTCCHHHHHHHSCCEEEEEECC-CCTTCHHHHHHHHHHHHHHHHHTTCGGGTTSEEEEEETTCCHHHH
T ss_pred HHHHHHHHhCccccCCCcccccCCCCeEEEEecc-CCCCcHHHHHHHHHHHHHHHHhccChhhCCceEEEEeCCCCHHHH
Confidence 5443 21 2567777773 222 1222 2333333111 14 7999999998888
Q ss_pred HHHHhcCCEEEECCC--CCCCchHHHHHhhcCCceEEEecCCCcccccccccccccceeeeeec
Q 011163 378 HLIFSGSDIILCHSF--HDPLLQVPLKALKYGAAPIAVTSSDIEFRHFAEFDHESTRFSRFISS 439 (492)
Q Consensus 378 ~~~~~~adi~v~pS~--~E~~glv~lEAma~G~PvV~~~~~~gg~~e~v~~~~~~~g~~G~~~~ 439 (492)
..++.+||+...-|. .|++|.+-|-+|..|.+.+++-. |+-.|+.++. ..+|+|+|.
T Consensus 702 e~iipaaDvseqistag~EASGTsnMKfalNGaLtlgtlD--GanvEi~e~v---G~eN~fiFG 760 (879)
T 1ygp_A 702 EIIIPASDLSEHISTAGTEASGTSNMKFVMNGGLIIGTVD--GANVEITREI---GEDNVFLFG 760 (879)
T ss_dssp HHHGGGCSEEEECCCTTCCSCCHHHHHHHTTTCEEEEESC--THHHHHHHHH---CGGGSEEES
T ss_pred HHhhhhhhhhhhCCCCCccccCchhhHHHHcCCeeeeccc--chhHHHHHHc---CcccEEEcc
Confidence 899999999999997 79999999999999999999998 9999986431 124667774
No 54
>4gyw_A UDP-N-acetylglucosamine--peptide N- acetylglucosaminyltransferase 110 kDa subunit...; GT-B, glycosyltransferase, glcnacylation, transferase-peptid; HET: UDP NAG; 1.70A {Homo sapiens} PDB: 3pe3_A* 3pe4_A* 4ay5_A* 4ay6_A* 3tax_A* 4gyy_A* 4gz3_A* 4gz5_A* 4gz6_A*
Probab=98.24 E-value=3.8e-05 Score=82.00 Aligned_cols=182 Identities=9% Similarity=-0.023 Sum_probs=126.2
Q ss_pred HHHhCCCCCCCceEEEEEeccccccCHHHHHHHHHHHhH--cCcEEEEEecCCChhHHHHHHHHHHHhCC--CeEEEEec
Q 011163 296 QQQLGLSKDASTIVVGCIFSDVSDVFLENLKAVVRGAKM--RGIQFVFTGTNKLPSASRALVSFQEELKD--GIVIFVDS 371 (492)
Q Consensus 296 ~~~lg~~~~~~~~~i~~~grl~~~Kg~~~li~a~~~l~~--~~~~lvivG~g~~~~~~~~l~~~~~~~~~--~~v~~~~~ 371 (492)
|+.+|++.+ .++|++..++.+- -+..++++.++.+ .+.+|++.... ...++.+++.++..+. +|+.|.+.
T Consensus 514 R~~~gLp~~--~v~f~~fN~~~Ki--~p~~~~~W~~IL~~vP~S~L~Ll~~~--~~~~~~l~~~~~~~gi~~~r~~f~~~ 587 (723)
T 4gyw_A 514 RSQYGLPED--AIVYCNFNQLYKI--DPSTLQMWANILKRVPNSVLWLLRFP--AVGEPNIQQYAQNMGLPQNRIIFSPV 587 (723)
T ss_dssp GGGGTCCTT--SEEEECCSCGGGC--CHHHHHHHHHHHHHCSSEEEEEEETT--GGGHHHHHHHHHHTTCCGGGEEEEEC
T ss_pred hhhcCCCCC--CEEEEeCCccccC--CHHHHHHHHHHHHhCCCCeEEEEeCc--HHHHHHHHHHHHhcCCCcCeEEECCC
Confidence 567788864 4777777776655 5688888888876 37899998743 2345677777777653 89999988
Q ss_pred cCHHHHHHHHhcCCEEEECCCCCCCchHHHHHhhcCCceEEEecCCCccccccccccc-ccceeeeeecCCCHHHHHHHH
Q 011163 372 YDDALLHLIFSGSDIILCHSFHDPLLQVPLKALKYGAAPIAVTSSDIEFRHFAEFDHE-STRFSRFISSTFGNISLSQAL 450 (492)
Q Consensus 372 ~~~~~~~~~~~~adi~v~pS~~E~~glv~lEAma~G~PvV~~~~~~gg~~e~v~~~~~-~~g~~G~~~~~~~~~~l~~ai 450 (492)
.+.++--..++.+|+++=|--| +-|.+.+||+.+|+|||.-.- ..+..=+..+.. ..|..-++ ..|.++..+.-
T Consensus 588 ~~~~~~l~~~~~~Di~LDt~p~-~g~tT~~eal~~GvPvvt~~g--~~~~sR~~~s~l~~~gl~e~i--a~~~~~Y~~~a 662 (723)
T 4gyw_A 588 APKEEHVRRGQLADVCLDTPLC-NGHTTGMDVLWAGTPMVTMPG--ETLASRVAASQLTCLGCLELI--AKNRQEYEDIA 662 (723)
T ss_dssp CCHHHHHHHGGGCSEEECCSSS-CCSHHHHHHHHTTCCEEBCCC--SSGGGTHHHHHHHHHTCGGGB--CSSHHHHHHHH
T ss_pred CCHHHHHHHhCCCeEEeCCCCc-CCHHHHHHHHHcCCCEEEccC--CCccHhHHHHHHHHcCCcccc--cCCHHHHHHHH
Confidence 8877766889999999998877 558999999999998776431 111110110000 01111133 34777888887
Q ss_pred HHHhcCHHHHHHHHHHHHh-----ccCCchhhHHHHHHHHHHHH
Q 011163 451 EEIKNNPLSWKRKIKDAML-----QDFSWDADCNDIHISAYTAI 489 (492)
Q Consensus 451 ~~~~~~~~~~~~~~~~a~~-----~~fsw~~~a~~~~~~~Y~~l 489 (492)
..+.+|++.+.++.+.-+. --|+-...++.+ ++.|+++
T Consensus 663 ~~la~d~~~l~~lr~~l~~~~~~s~l~d~~~~~~~l-e~a~~~~ 705 (723)
T 4gyw_A 663 VKLGTDLEYLKKVRGKVWKQRISSPLFNTKQYTMEL-ERLYLQM 705 (723)
T ss_dssp HHHHHCHHHHHHHHHHHHHHHHHSSTTCHHHHHHHH-HHHHHHH
T ss_pred HHHhcCHHHHHHHHHHHHHHHHhCcCcCHHHHHHHH-HHHHHHH
Confidence 8888899888777655432 368889999995 8899876
No 55
>1psw_A ADP-heptose LPS heptosyltransferase II; structural genomics, NYSGXRC, LPS biosynthetic pathway, PSI, protein structure initiative; 2.00A {Escherichia coli} SCOP: c.87.1.7
Probab=97.17 E-value=0.0023 Score=61.79 Aligned_cols=115 Identities=12% Similarity=0.044 Sum_probs=76.4
Q ss_pred HHHHHHHHhCCCCCCCceEEEEEec-cccccCHH--HHHHHHHHHhHcCcEEEEEecCCChhHHHHHHHHHHHhC---CC
Q 011163 291 CKVTLQQQLGLSKDASTIVVGCIFS-DVSDVFLE--NLKAVVRGAKMRGIQFVFTGTNKLPSASRALVSFQEELK---DG 364 (492)
Q Consensus 291 ~~~~~~~~lg~~~~~~~~~i~~~gr-l~~~Kg~~--~li~a~~~l~~~~~~lvivG~g~~~~~~~~l~~~~~~~~---~~ 364 (492)
.+..+++.+|+..+ +..+.+..|. ..+.|.+. .+.++++.+.+.++++++.| ++. ..+..+++.+..+ ..
T Consensus 166 ~~~~~~~~~~~~~~-~~~i~l~pga~~~~~k~wp~~~~~~l~~~L~~~~~~vvl~g-~~~--e~~~~~~i~~~~~~~~~~ 241 (348)
T 1psw_A 166 EKSYTCNQFSLSSE-RPMIGFCPGAEFGPAKRWPHYHYAELAKQLIDEGYQVVLFG-SAK--DHEAGNEILAALNTEQQA 241 (348)
T ss_dssp HHHHHHHHTTCCSS-SCEEEEECCCTTCGGGSCCHHHHHHHHHHHHHTTCEEEECC-CGG--GHHHHHHHHTTSCHHHHT
T ss_pred HHHHHHHHhCCCCC-CcEEEEECCCCccccCCCCHHHHHHHHHHHHHCCCeEEEEe-Chh--hHHHHHHHHHhhhhcccc
Confidence 45567778887633 2345566665 55666655 88888888876689999998 432 2333444443321 02
Q ss_pred eE-EEEeccCHHHHHHHHhcCCEEEECCCCCCCchHHHHHhhcCCceEEEe
Q 011163 365 IV-IFVDSYDDALLHLIFSGSDIILCHSFHDPLLQVPLKALKYGAAPIAVT 414 (492)
Q Consensus 365 ~v-~~~~~~~~~~~~~~~~~adi~v~pS~~E~~glv~lEAma~G~PvV~~~ 414 (492)
++ .+.+..+-.++..+++.||++|..+ .|..-+ |.|+|+|+|+--
T Consensus 242 ~~~~l~g~~sl~e~~ali~~a~l~I~~D----sg~~Hl-Aaa~g~P~v~lf 287 (348)
T 1psw_A 242 WCRNLAGETQLDQAVILIAACKAIVTND----SGLMHV-AAALNRPLVALY 287 (348)
T ss_dssp TEEECTTTSCHHHHHHHHHTSSEEEEES----SHHHHH-HHHTTCCEEEEE
T ss_pred ceEeccCcCCHHHHHHHHHhCCEEEecC----CHHHHH-HHHcCCCEEEEE
Confidence 34 3344556677889999999999885 466666 889999999854
No 56
>3tov_A Glycosyl transferase family 9; structural genomics, PSI-BIOL protein structure initiative, midwest center for structural genomics, MCSG; 2.98A {Veillonella parvula}
Probab=96.40 E-value=0.022 Score=54.97 Aligned_cols=112 Identities=13% Similarity=0.168 Sum_probs=74.0
Q ss_pred HHHHHhCCCCCCCceEEEEEeccccccCH--HHHHHHHHHHhHcCcEEEEEecCCChhHHHHHHHHHHHhCCCeEEEEec
Q 011163 294 TLQQQLGLSKDASTIVVGCIFSDVSDVFL--ENLKAVVRGAKMRGIQFVFTGTNKLPSASRALVSFQEELKDGIVIFVDS 371 (492)
Q Consensus 294 ~~~~~lg~~~~~~~~~i~~~grl~~~Kg~--~~li~a~~~l~~~~~~lvivG~g~~~~~~~~l~~~~~~~~~~~v~~~~~ 371 (492)
.+.+.+|+..+ +..+.+..|.-.+.|.+ +...+.++.+.+.+.++++.| ++. ..+..+++.+..+...+.+.+.
T Consensus 174 ~~l~~~g~~~~-~~~i~i~pga~~~~k~wp~~~~~~l~~~l~~~g~~vvl~g-~~~--e~~~~~~i~~~~~~~~~~l~g~ 249 (349)
T 3tov_A 174 EFYSSHGLTDT-DILIGFNIGSAVPEKRWPAERFAHVADYFGRLGYKTVFFG-GPM--DLEMVQPVVEQMETKPIVATGK 249 (349)
T ss_dssp HHHHHTTCCTT-CCEEEEECCCSSGGGCCCHHHHHHHHHHHHHHTCEEEECC-CTT--THHHHHHHHHTCSSCCEECTTC
T ss_pred HHHHHcCCCCC-CCEEEEeCCCCCccCCCCHHHHHHHHHHHHhCCCeEEEEe-Ccc--hHHHHHHHHHhcccccEEeeCC
Confidence 34456677643 23445556643345544 578888888876688999988 432 2344555555553223444455
Q ss_pred cCHHHHHHHHhcCCEEEECCCCCCCchHHHHHhhcCCceEEEe
Q 011163 372 YDDALLHLIFSGSDIILCHSFHDPLLQVPLKALKYGAAPIAVT 414 (492)
Q Consensus 372 ~~~~~~~~~~~~adi~v~pS~~E~~glv~lEAma~G~PvV~~~ 414 (492)
.+-.++..+++.||++|.+. .|..-+ |.|+|+|+|+--
T Consensus 250 ~sl~e~~ali~~a~~~i~~D----sG~~Hl-Aaa~g~P~v~lf 287 (349)
T 3tov_A 250 FQLGPLAAAMNRCNLLITND----SGPMHV-GISQGVPIVALY 287 (349)
T ss_dssp CCHHHHHHHHHTCSEEEEES----SHHHHH-HHTTTCCEEEEC
T ss_pred CCHHHHHHHHHhCCEEEECC----CCHHHH-HHhcCCCEEEEE
Confidence 67677889999999999873 367777 889999999853
No 57
>2c1x_A UDP-glucose flavonoid 3-O glycosyltransferase; WINE, catalysis, glycosylation; HET: UDP B3P; 1.9A {Vitis vinifera} SCOP: c.87.1.10 PDB: 2c1z_A* 2c9z_A*
Probab=96.29 E-value=0.02 Score=57.53 Aligned_cols=146 Identities=11% Similarity=0.049 Sum_probs=82.4
Q ss_pred CceEEEEEeccccccCHHHHHHHHHHHhHcCcEEEEEecCCC-hhHHHHHHHHHHHhCCCeEEEEeccCHHHHHHHHh--
Q 011163 306 STIVVGCIFSDVSDVFLENLKAVVRGAKMRGIQFVFTGTNKL-PSASRALVSFQEELKDGIVIFVDSYDDALLHLIFS-- 382 (492)
Q Consensus 306 ~~~~i~~~grl~~~Kg~~~li~a~~~l~~~~~~lvivG~g~~-~~~~~~l~~~~~~~~~~~v~~~~~~~~~~~~~~~~-- 382 (492)
+..++++.|..... ..+.+.+.+..+.+.+.+++++-.... ..+.+.+ .+.. .+++...+..++. .+++
T Consensus 271 ~~vv~vs~GS~~~~-~~~~~~~~~~~l~~~~~~~lw~~~~~~~~~l~~~~---~~~~-~~~~~v~~w~pq~---~vL~h~ 342 (456)
T 2c1x_A 271 TSVVYISFGTVTTP-PPAEVVALSEALEASRVPFIWSLRDKARVHLPEGF---LEKT-RGYGMVVPWAPQA---EVLAHE 342 (456)
T ss_dssp TCEEEEECCSSCCC-CHHHHHHHHHHHHHHTCCEEEECCGGGGGGSCTTH---HHHH-TTTEEEESCCCHH---HHHTST
T ss_pred cceEEEecCccccC-CHHHHHHHHHHHHhcCCeEEEEECCcchhhCCHHH---Hhhc-CCceEEecCCCHH---HHhcCC
Confidence 34566777876543 234444444444444667666531211 0111111 1223 2577766555543 5678
Q ss_pred cCCEEEECCCCCCCchHHHHHhhcCCceEEEecCCCcccccccccc-cccc-eeeeeecC--CCHHHHHHHHHHHhcCHH
Q 011163 383 GSDIILCHSFHDPLLQVPLKALKYGAAPIAVTSSDIEFRHFAEFDH-ESTR-FSRFISST--FGNISLSQALEEIKNNPL 458 (492)
Q Consensus 383 ~adi~v~pS~~E~~glv~lEAma~G~PvV~~~~~~gg~~e~v~~~~-~~~g-~~G~~~~~--~~~~~l~~ai~~~~~~~~ 458 (492)
++|+||.- +-..+++||+++|+|.|+... ..|...... .... +.|..++. -+.+.++++|+++++|++
T Consensus 343 ~~~~fvth----~G~~S~~Eal~~GvP~i~~P~----~~dQ~~Na~~l~~~~g~g~~l~~~~~~~~~l~~~i~~ll~~~~ 414 (456)
T 2c1x_A 343 AVGAFVTH----CGWNSLWESVAGGVPLICRPF----FGDQRLNGRMVEDVLEIGVRIEGGVFTKSGLMSCFDQILSQEK 414 (456)
T ss_dssp TEEEEEEC----CCHHHHHHHHHHTCCEEECCC----STTHHHHHHHHHHTSCCEEECGGGSCCHHHHHHHHHHHHHSHH
T ss_pred cCCEEEec----CCcchHHHHHHhCceEEecCC----hhhHHHHHHHHHHHhCeEEEecCCCcCHHHHHHHHHHHHCCCc
Confidence 67888854 335789999999999999654 233311000 0012 34666653 357899999999999875
Q ss_pred HHHHHHHHHH
Q 011163 459 SWKRKIKDAM 468 (492)
Q Consensus 459 ~~~~~~~~a~ 468 (492)
.+++.+++.
T Consensus 415 -~~~~r~~a~ 423 (456)
T 2c1x_A 415 -GKKLRENLR 423 (456)
T ss_dssp -HHHHHHHHH
T ss_pred -HHHHHHHHH
Confidence 344555543
No 58
>3hbm_A UDP-sugar hydrolase; PSEG; 1.80A {Campylobacter jejuni subsp} PDB: 3hbn_A*
Probab=96.16 E-value=0.017 Score=53.89 Aligned_cols=93 Identities=11% Similarity=0.029 Sum_probs=58.8
Q ss_pred eEEEEEeccccccCHHHHHHHHHHHhHcCcEEEEEecCCChhHHHHHHHHHHHhCCCeEEEEeccCHHHHHHHHhcCCEE
Q 011163 308 IVVGCIFSDVSDVFLENLKAVVRGAKMRGIQFVFTGTNKLPSASRALVSFQEELKDGIVIFVDSYDDALLHLIFSGSDII 387 (492)
Q Consensus 308 ~~i~~~grl~~~Kg~~~li~a~~~l~~~~~~lvivG~g~~~~~~~~l~~~~~~~~~~~v~~~~~~~~~~~~~~~~~adi~ 387 (492)
.++++.|..+...- .-++++.+.+..--.++.|.+. ...+++++..+.. .++.+.+.. + .+.++|+.||+.
T Consensus 159 ~ILv~~GG~d~~~l---~~~vl~~L~~~~~i~vv~G~~~--~~~~~l~~~~~~~--~~v~v~~~~-~-~m~~~m~~aDlv 229 (282)
T 3hbm_A 159 DFFICMGGTDIKNL---SLQIASELPKTKIISIATSSSN--PNLKKLQKFAKLH--NNIRLFIDH-E-NIAKLMNESNKL 229 (282)
T ss_dssp EEEEECCSCCTTCH---HHHHHHHSCTTSCEEEEECTTC--TTHHHHHHHHHTC--SSEEEEESC-S-CHHHHHHTEEEE
T ss_pred eEEEEECCCchhhH---HHHHHHHhhcCCCEEEEECCCc--hHHHHHHHHHhhC--CCEEEEeCH-H-HHHHHHHHCCEE
Confidence 45667777655432 2233333433222345567542 2455666666554 478766444 3 356899999999
Q ss_pred EECCCCCCCchHHHHHhhcCCceEEEe
Q 011163 388 LCHSFHDPLLQVPLKALKYGAAPIAVT 414 (492)
Q Consensus 388 v~pS~~E~~glv~lEAma~G~PvV~~~ 414 (492)
|.+ -|.++.|++++|+|.|.-.
T Consensus 230 I~~-----gG~T~~E~~~~g~P~i~ip 251 (282)
T 3hbm_A 230 IIS-----ASSLVNEALLLKANFKAIC 251 (282)
T ss_dssp EEE-----SSHHHHHHHHTTCCEEEEC
T ss_pred EEC-----CcHHHHHHHHcCCCEEEEe
Confidence 984 2589999999999999854
No 59
>3hbf_A Flavonoid 3-O-glucosyltransferase; glycosyltransferase, GT-B fold, GT1, phenylpropanoid metabolism; HET: UDP MYC; 2.10A {Medicago truncatula} SCOP: c.87.1.0 PDB: 3hbj_A*
Probab=96.03 E-value=0.069 Score=53.37 Aligned_cols=147 Identities=14% Similarity=0.008 Sum_probs=83.1
Q ss_pred ceEEEEEeccccccCHHHHHHHHHHHhHcCcEEEEEecCCChhHHHHH-HHHHHHhCCCeEEEEeccCHHHHHHHHhcCC
Q 011163 307 TIVVGCIFSDVSDVFLENLKAVVRGAKMRGIQFVFTGTNKLPSASRAL-VSFQEELKDGIVIFVDSYDDALLHLIFSGSD 385 (492)
Q Consensus 307 ~~~i~~~grl~~~Kg~~~li~a~~~l~~~~~~lvivG~g~~~~~~~~l-~~~~~~~~~~~v~~~~~~~~~~~~~~~~~ad 385 (492)
..++++.|..... ..+.+.+.+..+.+.+.+++++-.. + . .+.+ ....++. .+|+...+..++. .+++.++
T Consensus 274 ~vVyvsfGS~~~~-~~~~~~el~~~l~~~~~~flw~~~~-~-~-~~~lp~~~~~~~-~~~~~vv~w~Pq~---~vL~h~~ 345 (454)
T 3hbf_A 274 SVVYISFGSVVTP-PPHELTALAESLEECGFPFIWSFRG-D-P-KEKLPKGFLERT-KTKGKIVAWAPQV---EILKHSS 345 (454)
T ss_dssp CEEEEECCSSCCC-CHHHHHHHHHHHHHHCCCEEEECCS-C-H-HHHSCTTHHHHT-TTTEEEESSCCHH---HHHHSTT
T ss_pred ceEEEecCCCCcC-CHHHHHHHHHHHHhCCCeEEEEeCC-c-c-hhcCCHhHHhhc-CCceEEEeeCCHH---HHHhhcC
Confidence 4566777776532 2344555444454446787776522 2 1 1111 1112233 2677777655542 6789999
Q ss_pred EEEECCCCCCCchHHHHHhhcCCceEEEecCCCcccccccccc-ccc-ceeeeeecC--CCHHHHHHHHHHHhcCHHHHH
Q 011163 386 IILCHSFHDPLLQVPLKALKYGAAPIAVTSSDIEFRHFAEFDH-EST-RFSRFISST--FGNISLSQALEEIKNNPLSWK 461 (492)
Q Consensus 386 i~v~pS~~E~~glv~lEAma~G~PvV~~~~~~gg~~e~v~~~~-~~~-g~~G~~~~~--~~~~~l~~ai~~~~~~~~~~~ 461 (492)
+-++-++ +--.+.+||+++|+|.|+... . .|...... ..+ -+.|..++. -+.+.+++++++++++++ .+
T Consensus 346 v~~fvtH--~G~~S~~Eal~~GvP~i~~P~--~--~DQ~~Na~~v~~~~g~Gv~l~~~~~~~~~l~~av~~ll~~~~-~~ 418 (454)
T 3hbf_A 346 VGVFLTH--SGWNSVLECIVGGVPMISRPF--F--GDQGLNTILTESVLEIGVGVDNGVLTKESIKKALELTMSSEK-GG 418 (454)
T ss_dssp EEEEEEC--CCHHHHHHHHHHTCCEEECCC--S--TTHHHHHHHHHTTSCSEEECGGGSCCHHHHHHHHHHHHSSHH-HH
T ss_pred cCeEEec--CCcchHHHHHHcCCCEecCcc--c--ccHHHHHHHHHHhhCeeEEecCCCCCHHHHHHHHHHHHCCCh-HH
Confidence 4443344 334789999999999999654 2 33211000 001 135666654 457899999999998852 33
Q ss_pred HHHHHHH
Q 011163 462 RKIKDAM 468 (492)
Q Consensus 462 ~~~~~a~ 468 (492)
++.+++.
T Consensus 419 ~~r~~a~ 425 (454)
T 3hbf_A 419 IMRQKIV 425 (454)
T ss_dssp HHHHHHH
T ss_pred HHHHHHH
Confidence 4444443
No 60
>2pq6_A UDP-glucuronosyl/UDP-glucosyltransferase; glycosylation, isoflavonoid, uridine diphosphate glycosyltransferase; 2.10A {Medicago truncatula} SCOP: c.87.1.10
Probab=95.83 E-value=0.096 Score=52.90 Aligned_cols=145 Identities=12% Similarity=0.028 Sum_probs=83.5
Q ss_pred ceEEEEEeccccccCHHHHHHHHHHHhHcCcEEEEEecCCC----h-hHHHHHHHHHHHhCCCeEEEEeccCHHHHHHHH
Q 011163 307 TIVVGCIFSDVSDVFLENLKAVVRGAKMRGIQFVFTGTNKL----P-SASRALVSFQEELKDGIVIFVDSYDDALLHLIF 381 (492)
Q Consensus 307 ~~~i~~~grl~~~Kg~~~li~a~~~l~~~~~~lvivG~g~~----~-~~~~~l~~~~~~~~~~~v~~~~~~~~~~~~~~~ 381 (492)
..++++.|.... .....+.+.+..+.+.+.+++++-.... . .+.+.+ .+..+ +|+.+....++. .++
T Consensus 296 ~vv~vs~GS~~~-~~~~~~~~~~~~l~~~~~~~l~~~~~~~~~~~~~~l~~~~---~~~~~-~~~~v~~~~pq~---~~L 367 (482)
T 2pq6_A 296 SVVYVNFGSTTV-MTPEQLLEFAWGLANCKKSFLWIIRPDLVIGGSVIFSSEF---TNEIA-DRGLIASWCPQD---KVL 367 (482)
T ss_dssp CEEEEECCSSSC-CCHHHHHHHHHHHHHTTCEEEEECCGGGSTTTGGGSCHHH---HHHHT-TTEEEESCCCHH---HHH
T ss_pred ceEEEecCCccc-CCHHHHHHHHHHHHhcCCcEEEEEcCCccccccccCcHhH---HHhcC-CCEEEEeecCHH---HHh
Confidence 456677777542 2344455555555455678877642210 0 011222 22332 678777655543 478
Q ss_pred hcCCE--EEECCCCCCCchHHHHHhhcCCceEEEecCCCcccccccccc-cc-cceeeeeec-CCCHHHHHHHHHHHhcC
Q 011163 382 SGSDI--ILCHSFHDPLLQVPLKALKYGAAPIAVTSSDIEFRHFAEFDH-ES-TRFSRFISS-TFGNISLSQALEEIKNN 456 (492)
Q Consensus 382 ~~adi--~v~pS~~E~~glv~lEAma~G~PvV~~~~~~gg~~e~v~~~~-~~-~g~~G~~~~-~~~~~~l~~ai~~~~~~ 456 (492)
+.+++ || ++ +-..+++||+++|+|.|+... . .|...... .. .-+.|..++ .-+.+.+.++|+++++|
T Consensus 368 ~h~~~~~~v--th--~G~~s~~Eal~~GvP~i~~P~--~--~dQ~~na~~~~~~~G~g~~l~~~~~~~~l~~~i~~ll~~ 439 (482)
T 2pq6_A 368 NHPSIGGFL--TH--CGWNSTTESICAGVPMLCWPF--F--ADQPTDCRFICNEWEIGMEIDTNVKREELAKLINEVIAG 439 (482)
T ss_dssp TSTTEEEEE--EC--CCHHHHHHHHHHTCCEEECCC--S--TTHHHHHHHHHHTSCCEEECCSSCCHHHHHHHHHHHHTS
T ss_pred cCCCCCEEE--ec--CCcchHHHHHHcCCCEEecCc--c--cchHHHHHHHHHHhCEEEEECCCCCHHHHHHHHHHHHcC
Confidence 77666 55 43 445789999999999999765 2 33311100 00 123466665 24678999999999998
Q ss_pred HHHHHHHHHHHH
Q 011163 457 PLSWKRKIKDAM 468 (492)
Q Consensus 457 ~~~~~~~~~~a~ 468 (492)
++ .+++.+++.
T Consensus 440 ~~-~~~~r~~a~ 450 (482)
T 2pq6_A 440 DK-GKKMKQKAM 450 (482)
T ss_dssp HH-HHHHHHHHH
T ss_pred Cc-HHHHHHHHH
Confidence 86 345555554
No 61
>2gt1_A Lipopolysaccharide heptosyltransferase-1; GT-B fold; 1.90A {Escherichia coli UTI89} PDB: 2h1f_A* 2h1h_A*
Probab=94.48 E-value=0.14 Score=48.68 Aligned_cols=98 Identities=11% Similarity=0.057 Sum_probs=64.9
Q ss_pred eEEEEEeccccccCH--HHHHHHHHHHhHcCcEEEEEecCCChhHHHHHHHHHHHhCCCeEEEEeccCHHHHHHHHhcCC
Q 011163 308 IVVGCIFSDVSDVFL--ENLKAVVRGAKMRGIQFVFTGTNKLPSASRALVSFQEELKDGIVIFVDSYDDALLHLIFSGSD 385 (492)
Q Consensus 308 ~~i~~~grl~~~Kg~--~~li~a~~~l~~~~~~lvivG~g~~~~~~~~l~~~~~~~~~~~v~~~~~~~~~~~~~~~~~ad 385 (492)
.+.+..|.-.+.|.+ +.+.+.++.+.+.+.++++.+.++ ...+..+++.+.. .++.+.+..+-.++..+++.||
T Consensus 180 ~i~l~pga~~~~k~wp~~~~~~l~~~L~~~~~~vvl~~g~~--~e~~~~~~i~~~~--~~~~l~g~~sl~el~ali~~a~ 255 (326)
T 2gt1_A 180 YAVFLHATTRDDKHWPEEHWRELIGLLADSGIRIKLPWGAP--HEEERAKRLAEGF--AYVEVLPKMSLEGVARVLAGAK 255 (326)
T ss_dssp EEEEECCCSSGGGSCCHHHHHHHHHHTTTTCCEEEECCSSH--HHHHHHHHHHTTC--TTEEECCCCCHHHHHHHHHTCS
T ss_pred EEEEEeCCCCccccCCHHHHHHHHHHHHHCCCcEEEecCCH--HHHHHHHHHHhhC--CcccccCCCCHHHHHHHHHhCC
Confidence 455555644444544 477788877766678888874232 2233444554444 2455556667778889999999
Q ss_pred EEEECCCCCCCchHHHHHhhcCCceEEEe
Q 011163 386 IILCHSFHDPLLQVPLKALKYGAAPIAVT 414 (492)
Q Consensus 386 i~v~pS~~E~~glv~lEAma~G~PvV~~~ 414 (492)
++|... .|..-+ |.|.|+|+|+--
T Consensus 256 l~I~~D----SG~~Hl-Aaa~g~P~v~lf 279 (326)
T 2gt1_A 256 FVVSVD----TGLSHL-TAALDRPNITVY 279 (326)
T ss_dssp EEEEES----SHHHHH-HHHTTCCEEEEE
T ss_pred EEEecC----CcHHHH-HHHcCCCEEEEE
Confidence 999873 367777 667999999863
No 62
>2acv_A Triterpene UDP-glucosyl transferase UGT71G1; glycosyltransferase; HET: UDP; 2.00A {Medicago truncatula} SCOP: c.87.1.10 PDB: 2acw_A*
Probab=93.39 E-value=1 Score=44.98 Aligned_cols=153 Identities=9% Similarity=0.119 Sum_probs=82.2
Q ss_pred HHHHHhCCCCCCCceEEEEEeccccccCHHHHHHHHHHHhHcCcEEEEEecCCChhHHHHHHHHHHHhCCCeEEEEeccC
Q 011163 294 TLQQQLGLSKDASTIVVGCIFSDVSDVFLENLKAVVRGAKMRGIQFVFTGTNKLPSASRALVSFQEELKDGIVIFVDSYD 373 (492)
Q Consensus 294 ~~~~~lg~~~~~~~~~i~~~grl~~~Kg~~~li~a~~~l~~~~~~lvivG~g~~~~~~~~l~~~~~~~~~~~v~~~~~~~ 373 (492)
++.+.+...+ ++..++++.|.....-+.+.+.+++..+.+.+.+++++-..+...+.+.+.+.... + +++......+
T Consensus 265 ~~~~wl~~~~-~~~vv~vs~GS~~~~~~~~~~~~~~~~l~~~~~~~l~~~~~~~~~l~~~~~~~~~~-~-~~~~v~~w~p 341 (463)
T 2acv_A 265 LILKWLDEQP-DKSVVFLCFGSMGVSFGPSQIREIALGLKHSGVRFLWSNSAEKKVFPEGFLEWMEL-E-GKGMICGWAP 341 (463)
T ss_dssp HHHHHHHTSC-TTCEEEEECCSSCCCCCHHHHHHHHHHHHHHTCEEEEECCCCGGGSCTTHHHHHHH-H-CSEEEESSCC
T ss_pred hHHHHHhcCC-CCceEEEEeccccccCCHHHHHHHHHHHHhCCCcEEEEECCCcccCChhHHHhhcc-C-CCEEEEccCC
Confidence 3444444332 23456777787652223334444444444446787776522101111122221110 1 4666666555
Q ss_pred HHHHHHHHh--cCCEEEECCCCCCCchHHHHHhhcCCceEEEecCCCccccccccccc--ccceeeeee-c-------CC
Q 011163 374 DALLHLIFS--GSDIILCHSFHDPLLQVPLKALKYGAAPIAVTSSDIEFRHFAEFDHE--STRFSRFIS-S-------TF 441 (492)
Q Consensus 374 ~~~~~~~~~--~adi~v~pS~~E~~glv~lEAma~G~PvV~~~~~~gg~~e~v~~~~~--~~g~~G~~~-~-------~~ 441 (492)
+. .+++ ++|+||.- +-..+++||+++|+|.|+... ..|....... ...+.|..+ + .-
T Consensus 342 q~---~vL~h~~~~~fvth----~G~~s~~Eal~~GvP~i~~P~----~~dQ~~Na~~lv~~~g~g~~l~~~~~~~~~~~ 410 (463)
T 2acv_A 342 QV---EVLAHKAIGGFVSH----CGWNSILESMWFGVPILTWPI----YAEQQLNAFRLVKEWGVGLGLRVDYRKGSDVV 410 (463)
T ss_dssp HH---HHHHSTTEEEEEEC----CCHHHHHHHHHTTCCEEECCC----STTHHHHHHHHHHTSCCEEESCSSCCTTCCCC
T ss_pred HH---HHhCCCccCeEEec----CCchhHHHHHHcCCCeeeccc----hhhhHHHHHHHHHHcCeEEEEecccCCCCccc
Confidence 43 4565 67888855 335789999999999999654 2232110000 022356766 2 23
Q ss_pred CHHHHHHHHHHHhc-CHHHH
Q 011163 442 GNISLSQALEEIKN-NPLSW 460 (492)
Q Consensus 442 ~~~~l~~ai~~~~~-~~~~~ 460 (492)
+.+.++++|+++++ +++.+
T Consensus 411 ~~~~l~~ai~~ll~~~~~~r 430 (463)
T 2acv_A 411 AAEEIEKGLKDLMDKDSIVH 430 (463)
T ss_dssp CHHHHHHHHHHHTCTTCTHH
T ss_pred cHHHHHHHHHHHHhccHHHH
Confidence 67899999999996 34433
No 63
>2vch_A Hydroquinone glucosyltransferase; glycosyltransferase, N-glucosyltransferase, UDP-glucose- dependent, plant glycosyltransferase; HET: UDP; 1.45A {Arabidopsis thaliana} SCOP: c.87.1.10 PDB: 2vce_A* 2vg8_A*
Probab=93.04 E-value=0.58 Score=47.07 Aligned_cols=140 Identities=10% Similarity=0.014 Sum_probs=75.4
Q ss_pred CceEEEEEeccccccCHHHHHHHHHHHhHcCcEEEEEecCCC-------------hhHHHHHH-HHHHHhCCCeEEEEe-
Q 011163 306 STIVVGCIFSDVSDVFLENLKAVVRGAKMRGIQFVFTGTNKL-------------PSASRALV-SFQEELKDGIVIFVD- 370 (492)
Q Consensus 306 ~~~~i~~~grl~~~Kg~~~li~a~~~l~~~~~~lvivG~g~~-------------~~~~~~l~-~~~~~~~~~~v~~~~- 370 (492)
+..++++.|.... ...+.+.+.+..+.+.+.+++++-..+. ..+.+.+- ...++.. ++-....
T Consensus 268 ~~vvyvs~GS~~~-~~~~~~~~~~~al~~~~~~~lw~~~~~~~~~~~~~~~~~~~~~~~~~lp~~~~~~~~-~~g~~v~~ 345 (480)
T 2vch_A 268 GSVLYVSFGSGGT-LTCEQLNELALGLADSEQRFLWVIRSPSGIANSSYFDSHSQTDPLTFLPPGFLERTK-KRGFVIPF 345 (480)
T ss_dssp TCEEEEECTTTCC-CCHHHHHHHHHHHHHTTCEEEEEECCCCSSTTTTTTCC--CSCGGGGSCTTHHHHTT-TTEEEEES
T ss_pred CceEEEecccccC-CCHHHHHHHHHHHHhcCCcEEEEECCccccccccccccccccchhhhcCHHHHHHhC-CCeEEEeC
Confidence 3467777888653 2345555555555555678777642211 01100000 0111121 2222333
Q ss_pred ccCHHHHHHHHhcCCEEEECCCCCCCchHHHHHhhcCCceEEEecCCCccccccccccc--ccceeeeeecC-----CCH
Q 011163 371 SYDDALLHLIFSGSDIILCHSFHDPLLQVPLKALKYGAAPIAVTSSDIEFRHFAEFDHE--STRFSRFISST-----FGN 443 (492)
Q Consensus 371 ~~~~~~~~~~~~~adi~v~pS~~E~~glv~lEAma~G~PvV~~~~~~gg~~e~v~~~~~--~~g~~G~~~~~-----~~~ 443 (492)
..++. ++++.+++-++=++ +--.+.+||+++|+|.|+... ..|....... ..-+.|..++. -+.
T Consensus 346 w~Pq~---~vL~h~~v~~fvtH--gG~~S~~Eal~~GvP~i~~P~----~~DQ~~na~~l~~~~G~g~~l~~~~~~~~~~ 416 (480)
T 2vch_A 346 WAPQA---QVLAHPSTGGFLTH--CGWNSTLESVVSGIPLIAWPL----YAEQKMNAVLLSEDIRAALRPRAGDDGLVRR 416 (480)
T ss_dssp CCCHH---HHHHSTTEEEEEEC--CCHHHHHHHHHHTCCEEECCC----STTHHHHHHHHHHTTCCEECCCCCTTSCCCH
T ss_pred ccCHH---HHhCCCCcCeEEec--ccchhHHHHHHcCCCEEeccc----cccchHHHHHHHHHhCeEEEeecccCCccCH
Confidence 44542 67888895333344 334789999999999999654 2343110000 01234666653 367
Q ss_pred HHHHHHHHHHhcC
Q 011163 444 ISLSQALEEIKNN 456 (492)
Q Consensus 444 ~~l~~ai~~~~~~ 456 (492)
+.++++|++++++
T Consensus 417 ~~l~~av~~vl~~ 429 (480)
T 2vch_A 417 EEVARVVKGLMEG 429 (480)
T ss_dssp HHHHHHHHHHHTS
T ss_pred HHHHHHHHHHhcC
Confidence 8999999999973
No 64
>3ty2_A 5'-nucleotidase SURE; surviVal protein, phosphatase, hydrolase; HET: MSE; 1.89A {Coxiella burnetii} SCOP: c.106.1.0
Probab=92.68 E-value=0.093 Score=47.55 Aligned_cols=46 Identities=17% Similarity=0.088 Sum_probs=29.9
Q ss_pred CccccCCCceEEEEeeccccccccCcHHHHHhHHHHHHHHCCCeEEEEeecCCC
Q 011163 1 MEKWLRNGFHIIHICTEMDPLVSIGSLASYVTGLSGALQRKGHLVEVILPKYAC 54 (492)
Q Consensus 1 ~~~~~~~~mkIl~v~~~~~p~~~~GG~~~~~~~l~~~L~~~Gh~V~vi~~~~~~ 54 (492)
|++.++++||||+.+++.. ....+..|+++|.+ +|+|.|++|....
T Consensus 4 ~~~~~~~~m~ILlTNDDGi-------~apGi~aL~~~l~~-~~~V~VVAP~~~~ 49 (261)
T 3ty2_A 4 MKKTATPKLRLLLSNDDGV-------YAKGLAILAKTLAD-LGEVDVVAPDRNR 49 (261)
T ss_dssp -------CCEEEEECSSCT-------TCHHHHHHHHHHTT-TSEEEEEEESSCC
T ss_pred hhhccCCCCeEEEEcCCCC-------CCHHHHHHHHHHHh-cCCEEEEecCCCC
Confidence 6677788899999887632 23347788888877 7899999997553
No 65
>2jzc_A UDP-N-acetylglucosamine transferase subunit ALG13; rossmann-like fold, endoplasmic reticulum, glycosyltransferase, structural genomics; NMR {Saccharomyces cerevisiae} PDB: 2ks6_A
Probab=90.14 E-value=0.39 Score=42.75 Aligned_cols=45 Identities=20% Similarity=0.253 Sum_probs=33.1
Q ss_pred eEEEEeccCHHHHHHHHh-cCCEEEECCCCCCCchHHHHHhhcCCceEEEec
Q 011163 365 IVIFVDSYDDALLHLIFS-GSDIILCHSFHDPLLQVPLKALKYGAAPIAVTS 415 (492)
Q Consensus 365 ~v~~~~~~~~~~~~~~~~-~adi~v~pS~~E~~glv~lEAma~G~PvV~~~~ 415 (492)
++..+ .|.+ ++..+|+ .||++|.= +-..+++|++++|+|.|+-..
T Consensus 115 ~v~v~-~f~~-~m~~~l~~~AdlvIsh----aGagTv~Eal~~G~P~IvVP~ 160 (224)
T 2jzc_A 115 KVIGF-DFST-KMQSIIRDYSDLVISH----AGTGSILDSLRLNKPLIVCVN 160 (224)
T ss_dssp EEEEC-CSSS-SHHHHHHHHCSCEEES----SCHHHHHHHHHTTCCCCEECC
T ss_pred eEEEe-eccc-hHHHHHHhcCCEEEEC----CcHHHHHHHHHhCCCEEEEcC
Confidence 44433 4433 3557889 99999954 446789999999999999654
No 66
>3l7i_A Teichoic acid biosynthesis protein F; GT-B fold, monotopic membrane protein, structural protein; 2.70A {Staphylococcus epidermidis} PDB: 3l7j_A 3l7k_A* 3l7l_A* 3l7m_A*
Probab=88.82 E-value=1.7 Score=46.23 Aligned_cols=174 Identities=13% Similarity=0.039 Sum_probs=90.4
Q ss_pred HHHHHHHHHhCCCCCCCceEEEEEecccccc----C-----HHHHHHHHHHHhHcCcEEEEEecCCChhHHHHHHHHHHH
Q 011163 290 VCKVTLQQQLGLSKDASTIVVGCIFSDVSDV----F-----LENLKAVVRGAKMRGIQFVFTGTNKLPSASRALVSFQEE 360 (492)
Q Consensus 290 ~~~~~~~~~lg~~~~~~~~~i~~~grl~~~K----g-----~~~li~a~~~l~~~~~~lvivG~g~~~~~~~~l~~~~~~ 360 (492)
..+..+++++|++.+ .++|+|+-.+.... | ...-++.+.+....++.+++-. ++...+.+. . ..
T Consensus 523 ~~~~~~~~~~~~~~~--kk~ILyaPT~r~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~li~r~---Hp~~~~~~~-~-~~ 595 (729)
T 3l7i_A 523 EYLDEIRTHLNLPSD--KKVIMYAPTWRDDEFVSKGKYLFELKIDLDNLYKELGDDYVILLRM---HYLISNALD-L-SG 595 (729)
T ss_dssp HHHHHHHHHTTCCSS--CEEEEECCCCCGGGCCGGGSSCCCCTTCHHHHHHHHTTTEEEEECC---CHHHHTTCC-C-TT
T ss_pred HHHHHHHHHhCCCCC--CeEEEEeeeeeCCccccccccccchhhHHHHHHHHcCCCeEEEEec---Ccchhcccc-c-cc
Confidence 356778999999864 47788886655431 1 1122444444333466666644 332211110 0 11
Q ss_pred hCCCeEEEEeccCHHHHHHHHhcCCEEEECCCCCCCchHHHHHhhcCCceEEEecCCCcccccccccccccceeeeeecC
Q 011163 361 LKDGIVIFVDSYDDALLHLIFSGSDIILCHSFHDPLLQVPLKALKYGAAPIAVTSSDIEFRHFAEFDHESTRFSRFISST 440 (492)
Q Consensus 361 ~~~~~v~~~~~~~~~~~~~~~~~adi~v~pS~~E~~glv~lEAma~G~PvV~~~~~~gg~~e~v~~~~~~~g~~G~~~~~ 440 (492)
+ .+.+.....+ ..+.+++..||++|.= +.-++.|++..++|+|-..- -..+... ...|++++.
T Consensus 596 ~-~~~~~~~~~~--~di~~ll~~aD~lITD-----ySSv~fD~~~l~kPiif~~~---D~~~Y~~------~~rg~y~d~ 658 (729)
T 3l7i_A 596 Y-ENFAIDVSNY--NDVSELFLISDCLITD-----YSSVMFDYGILKRPQFFFAY---DIDKYDK------GLRGFYMNY 658 (729)
T ss_dssp C-TTTEEECTTC--SCHHHHHHTCSEEEES-----SCTHHHHHGGGCCCEEEECT---TTTTTTS------SCCSBSSCT
T ss_pred c-CCcEEeCCCC--cCHHHHHHHhCEEEee-----chHHHHhHHhhCCCEEEecC---CHHHHhh------ccCCcccCh
Confidence 1 1344433222 2455788999999953 23468999999999998742 1222211 112444432
Q ss_pred ---------CCHHHHHHHHHHHhcCHHHHHHHHHHHHhc--cCCchhhHHHHHHHHHH
Q 011163 441 ---------FGNISLSQALEEIKNNPLSWKRKIKDAMLQ--DFSWDADCNDIHISAYT 487 (492)
Q Consensus 441 ---------~~~~~l~~ai~~~~~~~~~~~~~~~~a~~~--~fsw~~~a~~~~~~~Y~ 487 (492)
.+.++|.++|+.....++.+.+..+.-..+ .|.=-+.++++...+++
T Consensus 659 ~~~~pg~~~~~~~eL~~~i~~~~~~~~~~~~~~~~~~~~~~~~~dg~as~ri~~~i~~ 716 (729)
T 3l7i_A 659 MEDLPGPIYTEPYGLAKELKNLDKVQQQYQEKIDAFYDRFCSVDNGKASQYIGDLIHK 716 (729)
T ss_dssp TSSSSSCEESSHHHHHHHHTTHHHHHHHTHHHHHHHHHHHSTTCCSCHHHHHHHHHHH
T ss_pred hHhCCCCeECCHHHHHHHHhhhhccchhHHHHHHHHHHHhCCccCChHHHHHHHHHHh
Confidence 245788888887754333333322222222 23333555565444443
No 67
>4gi5_A Quinone reductase; protein structure initiative, FAD bound, structural genomics, PSI-biology; HET: FAD; 1.75A {Klebsiella pneumoniae subsp}
Probab=83.70 E-value=1.4 Score=40.56 Aligned_cols=44 Identities=20% Similarity=0.141 Sum_probs=29.7
Q ss_pred cccCCCceEEEEeeccccccccCc-HHHHHhHHHHHHHHCCCeEEEEee
Q 011163 3 KWLRNGFHIIHICTEMDPLVSIGS-LASYVTGLSGALQRKGHLVEVILP 50 (492)
Q Consensus 3 ~~~~~~mkIl~v~~~~~p~~~~GG-~~~~~~~l~~~L~~~Gh~V~vi~~ 50 (492)
+.-.++||||+|.. +|.. ++ .........++|.+.||+|.++-.
T Consensus 17 ~~~m~~MKiLII~a--HP~~--~S~n~aL~~~~~~~l~~~G~eV~v~DL 61 (280)
T 4gi5_A 17 NLYFQSMKVLLIYA--HPEP--RSLNGALKNFAIRHLQQAGHEVQVSDL 61 (280)
T ss_dssp -----CCEEEEEEC--CSCT--TSHHHHHHHHHHHHHHHTTCEEEEEET
T ss_pred cchhhCCeEEEEEe--CCCC--ccHHHHHHHHHHHHHHHCCCeEEEEEc
Confidence 45578899999997 4642 34 345566678889999999999864
No 68
>4b4o_A Epimerase family protein SDR39U1; isomerase; HET: NDP PE4; 2.70A {Homo sapiens}
Probab=82.56 E-value=1 Score=41.73 Aligned_cols=33 Identities=24% Similarity=0.353 Sum_probs=27.2
Q ss_pred ceEEEEeeccccccccCcHHHHHhHHHHHHHHCCCeEEEEeec
Q 011163 9 FHIIHICTEMDPLVSIGSLASYVTGLSGALQRKGHLVEVILPK 51 (492)
Q Consensus 9 mkIl~v~~~~~p~~~~GG~~~~~~~l~~~L~~~Gh~V~vi~~~ 51 (492)
||||+ | ||.|-.=..|++.|.++||+|++++..
T Consensus 1 MkILV-T---------GatGfIG~~L~~~L~~~G~~V~~l~R~ 33 (298)
T 4b4o_A 1 MRVLV-G---------GGTGFIGTALTQLLNARGHEVTLVSRK 33 (298)
T ss_dssp CEEEE-E---------TTTSHHHHHHHHHHHHTTCEEEEEESS
T ss_pred CEEEE-E---------CCCCHHHHHHHHHHHHCCCEEEEEECC
Confidence 89865 3 677777788999999999999999864
No 69
>3hly_A Flavodoxin-like domain; Q5MZP6_SYNP6, flavoprotein, DFA1, SNR135D, NESG, structural genomics, PSI-2; 2.40A {Synechococcus elongatus pcc 6301}
Probab=74.39 E-value=4.2 Score=33.80 Aligned_cols=38 Identities=13% Similarity=0.179 Sum_probs=31.1
Q ss_pred ceEEEEeeccccccccCcHHHHHhHHHHHHHHCCCeEEEEeec
Q 011163 9 FHIIHICTEMDPLVSIGSLASYVTGLSGALQRKGHLVEVILPK 51 (492)
Q Consensus 9 mkIl~v~~~~~p~~~~GG~~~~~~~l~~~L~~~Gh~V~vi~~~ 51 (492)
|||+++.. . .+|.++.+...++++|.+.|++|.++-..
T Consensus 1 Mkv~IvY~--S---~tGnT~~~A~~ia~~l~~~g~~v~~~~~~ 38 (161)
T 3hly_A 1 MSVLIGYL--S---DYGYSDRLSQAIGRGLVKTGVAVEMVDLR 38 (161)
T ss_dssp -CEEEEEC--T---TSTTHHHHHHHHHHHHHHTTCCEEEEETT
T ss_pred CEEEEEEE--C---CChHHHHHHHHHHHHHHhCCCeEEEEECC
Confidence 78888764 2 46999999999999999999999888654
No 70
>2pq6_A UDP-glucuronosyl/UDP-glucosyltransferase; glycosylation, isoflavonoid, uridine diphosphate glycosyltransferase; 2.10A {Medicago truncatula} SCOP: c.87.1.10
Probab=73.97 E-value=3 Score=41.75 Aligned_cols=45 Identities=16% Similarity=0.250 Sum_probs=30.3
Q ss_pred CccccCCCceEEEEeeccccccccCcHHHHHhHHHHHHHHCCCeEEEEeec
Q 011163 1 MEKWLRNGFHIIHICTEMDPLVSIGSLASYVTGLSGALQRKGHLVEVILPK 51 (492)
Q Consensus 1 ~~~~~~~~mkIl~v~~~~~p~~~~GG~~~~~~~l~~~L~~~Gh~V~vi~~~ 51 (492)
|.-..+.++||+++.. | ..|=-.-+.+|++.|+++||+|+++++.
T Consensus 1 ~~~~~~~~~~vl~~p~---p---~~GHi~P~l~La~~L~~rG~~VT~v~t~ 45 (482)
T 2pq6_A 1 MGNFANRKPHVVMIPY---P---VQGHINPLFKLAKLLHLRGFHITFVNTE 45 (482)
T ss_dssp -------CCEEEEECC---S---SHHHHHHHHHHHHHHHHTTCEEEEEEEH
T ss_pred CCcccCCCCEEEEecC---c---cchhHHHHHHHHHHHHhCCCeEEEEeCC
Confidence 3334455679988762 3 2455666889999999999999999875
No 71
>2phj_A 5'-nucleotidase SURE; SURE protein, putative acid phosphatase, structural genomics, 3-D structure, mixed alpha/beta protein, NPPSFA; 1.50A {Aquifex aeolicus VF5} PDB: 2wqk_A
Probab=73.72 E-value=2.9 Score=37.63 Aligned_cols=38 Identities=18% Similarity=0.207 Sum_probs=29.8
Q ss_pred ceEEEEeeccccccccCcHHHHHhHHHHHHHHCCCeEEEEeecCCC
Q 011163 9 FHIIHICTEMDPLVSIGSLASYVTGLSGALQRKGHLVEVILPKYAC 54 (492)
Q Consensus 9 mkIl~v~~~~~p~~~~GG~~~~~~~l~~~L~~~Gh~V~vi~~~~~~ 54 (492)
||||+.+++.. ....+..|+++|.+.| +|.|++|....
T Consensus 2 M~ILlTNDDGi-------~apGi~aL~~~l~~~g-~V~VVAP~~~~ 39 (251)
T 2phj_A 2 PTFLLVNDDGY-------FSPGINALREALKSLG-RVVVVAPDRNL 39 (251)
T ss_dssp CEEEEECSSCT-------TCHHHHHHHHHHTTTS-EEEEEEESSCC
T ss_pred CEEEEECCCCC-------CCHHHHHHHHHHHhcC-CEEEEecCCCc
Confidence 99999887632 2344788899999998 99999997553
No 72
>3grc_A Sensor protein, kinase; protein structure initiative II(PSI II), NYSGXRC, 11025B, structural genomics; 2.21A {Polaromonas SP}
Probab=73.25 E-value=30 Score=26.86 Aligned_cols=113 Identities=14% Similarity=0.016 Sum_probs=64.8
Q ss_pred CcEEEEEecCCChhHHHHHHHHHHHhCCCeEEEEeccCHHHHHHHH--hcCCEEEECCC-CCCCchHHHHHhhc-----C
Q 011163 336 GIQFVFTGTNKLPSASRALVSFQEELKDGIVIFVDSYDDALLHLIF--SGSDIILCHSF-HDPLLQVPLKALKY-----G 407 (492)
Q Consensus 336 ~~~lvivG~g~~~~~~~~l~~~~~~~~~~~v~~~~~~~~~~~~~~~--~~adi~v~pS~-~E~~glv~lEAma~-----G 407 (492)
..+++|+.+ ++...+.++...++.+ -.+... .+.++....+ ...|++++-.. -+.-|+.+++.+.. .
T Consensus 6 ~~~iLivdd--~~~~~~~l~~~l~~~g-~~v~~~--~~~~~a~~~l~~~~~dlvi~d~~l~~~~g~~~~~~l~~~~~~~~ 80 (140)
T 3grc_A 6 RPRILICED--DPDIARLLNLMLEKGG-FDSDMV--HSAAQALEQVARRPYAAMTVDLNLPDQDGVSLIRALRRDSRTRD 80 (140)
T ss_dssp CSEEEEECS--CHHHHHHHHHHHHHTT-CEEEEE--CSHHHHHHHHHHSCCSEEEECSCCSSSCHHHHHHHHHTSGGGTT
T ss_pred CCCEEEEcC--CHHHHHHHHHHHHHCC-CeEEEE--CCHHHHHHHHHhCCCCEEEEeCCCCCCCHHHHHHHHHhCcccCC
Confidence 357777763 3445556666666542 344322 2333322232 34688877544 35567777776653 6
Q ss_pred CceEEEecCCCcccccccccccccceeeeeecCCCHHHHHHHHHHHhc
Q 011163 408 AAPIAVTSSDIEFRHFAEFDHESTRFSRFISSTFGNISLSQALEEIKN 455 (492)
Q Consensus 408 ~PvV~~~~~~gg~~e~v~~~~~~~g~~G~~~~~~~~~~l~~ai~~~~~ 455 (492)
+|+|+... ..-.+.+.......|..+|+..|.+.+.|.++|..+++
T Consensus 81 ~~ii~~s~--~~~~~~~~~~~~~~g~~~~l~kP~~~~~l~~~i~~~l~ 126 (140)
T 3grc_A 81 LAIVVVSA--NAREGELEFNSQPLAVSTWLEKPIDENLLILSLHRAID 126 (140)
T ss_dssp CEEEEECT--THHHHHHHHCCTTTCCCEEECSSCCHHHHHHHHHHHHH
T ss_pred CCEEEEec--CCChHHHHHHhhhcCCCEEEeCCCCHHHHHHHHHHHHH
Confidence 78887653 22111211011124667899999999999999998864
No 73
>1wcv_1 SOJ, segregation protein; ATPase, bacterial, chromosome segregation; 1.6A {Thermus thermophilus} PDB: 2bej_A* 2bek_A*
Probab=72.83 E-value=4 Score=36.84 Aligned_cols=41 Identities=22% Similarity=0.267 Sum_probs=29.7
Q ss_pred cCCCceEEEEeeccccccccCcHHH--HHhHHHHHHHHCCCeEEEEeec
Q 011163 5 LRNGFHIIHICTEMDPLVSIGSLAS--YVTGLSGALQRKGHLVEVILPK 51 (492)
Q Consensus 5 ~~~~mkIl~v~~~~~p~~~~GG~~~--~~~~l~~~L~~~Gh~V~vi~~~ 51 (492)
.++.|||+.|+. ..||+|+ .+.+|+.+|+++|.+|.++=.+
T Consensus 2 ~~~~~~vI~v~s------~kGGvGKTt~a~~LA~~la~~g~~VlliD~D 44 (257)
T 1wcv_1 2 LRAKVRRIALAN------QKGGVGKTTTAINLAAYLARLGKRVLLVDLD 44 (257)
T ss_dssp ---CCCEEEECC------SSCCHHHHHHHHHHHHHHHHTTCCEEEEECC
T ss_pred CCCCCEEEEEEe------CCCCchHHHHHHHHHHHHHHCCCCEEEEECC
Confidence 345688877775 2478774 6678999999999999988644
No 74
>2d1p_A TUSD, hypothetical UPF0163 protein YHEN; tRNA modification, sulfur transfer, structural genomics, translation; 2.15A {Escherichia coli} SCOP: c.114.1.1
Probab=72.78 E-value=7 Score=31.67 Aligned_cols=42 Identities=19% Similarity=0.188 Sum_probs=32.4
Q ss_pred CCceEEEEeeccccccccCcHHHHHhHHHHHHHHCCCeE-EEEeec
Q 011163 7 NGFHIIHICTEMDPLVSIGSLASYVTGLSGALQRKGHLV-EVILPK 51 (492)
Q Consensus 7 ~~mkIl~v~~~~~p~~~~GG~~~~~~~l~~~L~~~Gh~V-~vi~~~ 51 (492)
..||++++... .|+. .-.......++.++.+.||+| .|+-..
T Consensus 11 ~~~~~~ivv~~-~Pyg--~~~a~~Al~~A~aala~g~eV~~VFf~~ 53 (140)
T 2d1p_A 11 GSMRFAIVVTG-PAYG--TQQASSAFQFAQALIADGHELSSVFFYR 53 (140)
T ss_dssp CCCEEEEEECS-CSSS--SSHHHHHHHHHHHHHHTTCEEEEEEECG
T ss_pred CceEEEEEEcC-CCCC--cHHHHHHHHHHHHHHHCCCccCEEEEec
Confidence 35999999874 6652 345556689999999999999 888754
No 75
>2e6c_A 5'-nucleotidase SURE; SURE protein, cowith manganese ION and AMP hydrolase; 2.05A {Thermus thermophilus} PDB: 2e6b_A 2e69_A 2e6e_A 2e6g_A 2e6h_A
Probab=72.60 E-value=3.1 Score=37.33 Aligned_cols=38 Identities=18% Similarity=0.079 Sum_probs=29.1
Q ss_pred ceEEEEeeccccccccCcHHHHHhHHHHHHHHCCCeEEEEeecCCC
Q 011163 9 FHIIHICTEMDPLVSIGSLASYVTGLSGALQRKGHLVEVILPKYAC 54 (492)
Q Consensus 9 mkIl~v~~~~~p~~~~GG~~~~~~~l~~~L~~~Gh~V~vi~~~~~~ 54 (492)
||||+.+++.. ....+..|+++|.+.| +|.|++|....
T Consensus 1 M~ILlTNDDGi-------~apGi~aL~~~l~~~g-~V~VVAP~~~~ 38 (244)
T 2e6c_A 1 MRILVTNDDGI-------YSPGLWALAEAASQFG-EVFVAAPDTEQ 38 (244)
T ss_dssp CEEEEECSSCT-------TCHHHHHHHHHHTTTS-EEEEEEECSSC
T ss_pred CeEEEEcCCCC-------CcHhHHHHHHHHHhCC-CEEEEecCCCC
Confidence 89999887632 2344778888998888 99999997553
No 76
>2zay_A Response regulator receiver protein; structural genomics, NYSGXRC, target 11006U, protein structure initiative; 2.00A {Desulfuromonas acetoxidans}
Probab=71.80 E-value=22 Score=28.04 Aligned_cols=112 Identities=14% Similarity=0.032 Sum_probs=62.7
Q ss_pred CcEEEEEecCCChhHHHHHHHHHHHhCCCeEEEEeccCHHHHHHHH--hcCCEEEECCC-CCCCchHHHHHhhc-----C
Q 011163 336 GIQFVFTGTNKLPSASRALVSFQEELKDGIVIFVDSYDDALLHLIF--SGSDIILCHSF-HDPLLQVPLKALKY-----G 407 (492)
Q Consensus 336 ~~~lvivG~g~~~~~~~~l~~~~~~~~~~~v~~~~~~~~~~~~~~~--~~adi~v~pS~-~E~~glv~lEAma~-----G 407 (492)
..+++|+.+. +...+.++......+ -.|.. .-+.++....+ ...|++++=.. .+.-|+-+++.+.. .
T Consensus 8 ~~~iLivd~~--~~~~~~l~~~L~~~g-~~v~~--~~~~~~a~~~l~~~~~dlii~d~~l~~~~g~~~~~~l~~~~~~~~ 82 (147)
T 2zay_A 8 WWRIMLVDTQ--LPALAASISALSQEG-FDIIQ--CGNAIEAVPVAVKTHPHLIITEANMPKISGMDLFNSLKKNPQTAS 82 (147)
T ss_dssp CEEEEEECTT--GGGGHHHHHHHHHHT-EEEEE--ESSHHHHHHHHHHHCCSEEEEESCCSSSCHHHHHHHHHTSTTTTT
T ss_pred CceEEEEeCC--HHHHHHHHHHHHHcC-CeEEE--eCCHHHHHHHHHcCCCCEEEEcCCCCCCCHHHHHHHHHcCcccCC
Confidence 4577777643 344455555555542 23332 22333222222 24688777543 34456777776653 6
Q ss_pred CceEEEecCCCcccccccccccccceeeeeecCCCHHHHHHHHHHHhc
Q 011163 408 AAPIAVTSSDIEFRHFAEFDHESTRFSRFISSTFGNISLSQALEEIKN 455 (492)
Q Consensus 408 ~PvV~~~~~~gg~~e~v~~~~~~~g~~G~~~~~~~~~~l~~ai~~~~~ 455 (492)
+|+|+... ..-.+.+... ...|..+|+..|.+.+.|..+|..++.
T Consensus 83 ~pii~ls~--~~~~~~~~~~-~~~g~~~~l~kp~~~~~L~~~i~~~~~ 127 (147)
T 2zay_A 83 IPVIALSG--RATAKEEAQL-LDMGFIDFIAKPVNAIRLSARIKRVLK 127 (147)
T ss_dssp SCEEEEES--SCCHHHHHHH-HHHTCSEEEESSCCHHHHHHHHHHHHH
T ss_pred CCEEEEeC--CCCHHHHHHH-HhCCCCEEEeCCCCHHHHHHHHHHHHH
Confidence 77777554 2222222110 113567899999999999999998864
No 77
>1j9j_A Stationary phase surviVal protein; SURE protein, unknown function; 1.90A {Thermotoga maritima} SCOP: c.106.1.1 PDB: 1ilv_A 1j9k_A* 1j9l_A*
Probab=71.75 E-value=3.4 Score=37.15 Aligned_cols=38 Identities=16% Similarity=0.073 Sum_probs=29.1
Q ss_pred ceEEEEeeccccccccCcHHHHHhHHHHHHHHCCCeEEEEeecCCC
Q 011163 9 FHIIHICTEMDPLVSIGSLASYVTGLSGALQRKGHLVEVILPKYAC 54 (492)
Q Consensus 9 mkIl~v~~~~~p~~~~GG~~~~~~~l~~~L~~~Gh~V~vi~~~~~~ 54 (492)
||||+.+++.. ...-+..|+++|.+.| +|.|++|....
T Consensus 1 M~ILlTNDDGi-------~apGi~aL~~~l~~~g-~V~VVAP~~~~ 38 (247)
T 1j9j_A 1 MRILVTNDDGI-------QSKGIIVLAELLSEEH-EVFVVAPDKER 38 (247)
T ss_dssp CEEEEECSSCT-------TCHHHHHHHHHHTTTS-EEEEEEESSCC
T ss_pred CeEEEEcCCCC-------CcHhHHHHHHHHHhCC-CEEEEecCCCC
Confidence 89999887632 2344778888998888 99999997653
No 78
>2hy5_A Putative sulfurtransferase DSRE; DSRE, DSRF, sulfur, structural genomics, PSI, protein initiative, berkeley structural genomics center, BSGC, TRAN; 1.72A {Allochromatium vinosum} SCOP: c.114.1.1 PDB: 2hyb_A
Probab=71.63 E-value=7.3 Score=31.01 Aligned_cols=41 Identities=17% Similarity=0.180 Sum_probs=31.3
Q ss_pred ceEEEEeeccccccccCcHHHHHhHHHHHHHHCCCeE-EEEeecC
Q 011163 9 FHIIHICTEMDPLVSIGSLASYVTGLSGALQRKGHLV-EVILPKY 52 (492)
Q Consensus 9 mkIl~v~~~~~p~~~~GG~~~~~~~l~~~L~~~Gh~V-~vi~~~~ 52 (492)
||++++... .|+. .-.......++.++.+.||+| .|+-...
T Consensus 1 mk~~iiv~~-~p~~--~~~~~~al~~a~a~~~~g~~v~~vff~~d 42 (130)
T 2hy5_A 1 MKFALQINE-GPYQ--HQASDSAYQFAKAALEKGHEIFRVFFYHD 42 (130)
T ss_dssp CEEEEEECS-CTTT--STHHHHHHHHHHHHHHTTCEEEEEEECGG
T ss_pred CEEEEEEeC-CCCC--cHHHHHHHHHHHHHHhcCCeeCEEEEech
Confidence 788888864 5642 345566789999999999999 8887653
No 79
>3lqk_A Dipicolinate synthase subunit B; flavoprotein, PSI2, MCSG, structural protein structure initiative, midwest center for structural genomics; 2.10A {Bacillus halodurans}
Probab=71.04 E-value=3.7 Score=35.68 Aligned_cols=41 Identities=24% Similarity=0.142 Sum_probs=31.3
Q ss_pred ccCCCceEEEEeeccccccccCcHHHH--HhHHHHHHHHCCCeEEEEeecC
Q 011163 4 WLRNGFHIIHICTEMDPLVSIGSLASY--VTGLSGALQRKGHLVEVILPKY 52 (492)
Q Consensus 4 ~~~~~mkIl~v~~~~~p~~~~GG~~~~--~~~l~~~L~~~Gh~V~vi~~~~ 52 (492)
+.-+.+||++-.+ |+.+.+ ..+|.+.|.+.|++|.++....
T Consensus 3 m~l~~k~I~lgiT--------Gs~aa~~k~~~ll~~L~~~g~eV~vv~T~~ 45 (201)
T 3lqk_A 3 MNFAGKHVGFGLT--------GSHCTYHEVLPQMERLVELGAKVTPFVTHT 45 (201)
T ss_dssp CCCTTCEEEEECC--------SCGGGGGGTHHHHHHHHHTTCEEEEECSSC
T ss_pred CCcCCCEEEEEEE--------ChHHHHHHHHHHHHHHhhCCCEEEEEEChh
Confidence 3334568877553 677776 9999999999999999997643
No 80
>1l5x_A SurviVal protein E; structural genomics, putative acid phosphatase, mixed alpha/ protein, N-terminal rossmann-fold like; 2.00A {Pyrobaculum aerophilum} SCOP: c.106.1.1
Probab=69.79 E-value=4 Score=37.44 Aligned_cols=38 Identities=16% Similarity=0.053 Sum_probs=29.1
Q ss_pred ceEEEEeeccccccccCcHHHHHhHHHHHHHHCCCeEEEEeecCCC
Q 011163 9 FHIIHICTEMDPLVSIGSLASYVTGLSGALQRKGHLVEVILPKYAC 54 (492)
Q Consensus 9 mkIl~v~~~~~p~~~~GG~~~~~~~l~~~L~~~Gh~V~vi~~~~~~ 54 (492)
||||+.+++.. ...-+..|+++|.+.| +|.|++|....
T Consensus 1 M~ILlTNDDGi-------~ApGi~aL~~aL~~~g-~V~VVAP~~~q 38 (280)
T 1l5x_A 1 MKILVTNDDGV-------HSPGLRLLYQFALSLG-DVDVVAPESPK 38 (280)
T ss_dssp CEEEEECSSCT-------TCHHHHHHHHHHGGGS-EEEEEEESSCT
T ss_pred CeEEEEcCCCC-------CcHhHHHHHHHHHhCC-CEEEEecCCCC
Confidence 89999887632 2344778888898888 99999997553
No 81
>3f6r_A Flavodoxin; FMN binding, oxidized, electron transport, flavoprotein, FMN, transport; HET: FMN; 2.00A {Desulfovibrio desulfuricans} SCOP: c.23.5.0 PDB: 3f6s_A* 3f90_A* 3kap_A* 3kaq_A*
Probab=68.91 E-value=6.6 Score=31.83 Aligned_cols=38 Identities=18% Similarity=0.245 Sum_probs=31.6
Q ss_pred ceEEEEeeccccccccCcHHHHHhHHHHHHHHCCCeEEEEeec
Q 011163 9 FHIIHICTEMDPLVSIGSLASYVTGLSGALQRKGHLVEVILPK 51 (492)
Q Consensus 9 mkIl~v~~~~~p~~~~GG~~~~~~~l~~~L~~~Gh~V~vi~~~ 51 (492)
|||+++.. +.+|.++.+...++++|.+.|++|.++...
T Consensus 2 ~ki~I~y~-----S~tGnT~~~A~~ia~~l~~~g~~v~~~~~~ 39 (148)
T 3f6r_A 2 SKVLIVFG-----SSTGNTESIAQKLEELIAAGGHEVTLLNAA 39 (148)
T ss_dssp CEEEEEEE-----CSSSHHHHHHHHHHHHHHTTTCEEEEEETT
T ss_pred CeEEEEEE-----CCCchHHHHHHHHHHHHHhCCCeEEEEehh
Confidence 58877764 246899999999999999999999988654
No 82
>1xv5_A AGT, DNA alpha-glucosyltransferase; HET: DNA CME UDP; 1.73A {Enterobacteria phage T4} PDB: 1y6f_A* 1y6g_A* 1ya6_A* 1y8z_A*
Probab=68.49 E-value=57 Score=28.03 Aligned_cols=158 Identities=15% Similarity=0.026 Sum_probs=96.2
Q ss_pred EEEEeccccccCHHHHHHHHHHHhHc-CcEEEEEecCCChhHHHHHHHHH-----------HHhC--C-CeEEEEeccCH
Q 011163 310 VGCIFSDVSDVFLENLKAVVRGAKMR-GIQFVFTGTNKLPSASRALVSFQ-----------EELK--D-GIVIFVDSYDD 374 (492)
Q Consensus 310 i~~~grl~~~Kg~~~li~a~~~l~~~-~~~lvivG~g~~~~~~~~l~~~~-----------~~~~--~-~~v~~~~~~~~ 374 (492)
=-++||-..+||+..+.+--++..+. +-.-++-|-...|.+. .+++.. .+.+ + .--..+..+-.
T Consensus 200 nrwigrtttwkgfyqmfdfhekflkpagkstvmeglerspafi-aikekgipyeyygnreidkmnlapnqpaqildcyin 278 (401)
T 1xv5_A 200 NRWIGRTTTWKGFYQMFDFHEKFLKPAGKSTVMEGLERSPAFI-AIKEKGIPYEYYGNREIDKMNLAPNQPAQILDCYIN 278 (401)
T ss_dssp EEEECCSCGGGCHHHHHHHHHHTTTTTTCEEEEECCCCSHHHH-HHHHTTCCEEEECGGGGGGCCCSSSCCEEEESCCCH
T ss_pred hhhhcccchhHhHHHHhhHHHHhcCccchhhhhhhhhcCCceE-EEcccCCchhhcCcchhhhhcCCCCCcchhhhheec
Confidence 35899999999999999888877764 3345555532222211 111110 0000 1 22333444444
Q ss_pred HHHHHHHhcCCEEEECCCC------CCCchHHHHHhhcCCceEEEecCCCccccc-ccccccccceee-eeecCCCHHHH
Q 011163 375 ALLHLIFSGSDIILCHSFH------DPLLQVPLKALKYGAAPIAVTSSDIEFRHF-AEFDHESTRFSR-FISSTFGNISL 446 (492)
Q Consensus 375 ~~~~~~~~~adi~v~pS~~------E~~glv~lEAma~G~PvV~~~~~~gg~~e~-v~~~~~~~g~~G-~~~~~~~~~~l 446 (492)
.+.-+-++.+-+.-.-|.. -..-.+-+|--|||+.+|-... .|.-..+ |+........+| +.|+..|-++-
T Consensus 279 semlermsksgfgyqlsklnqkylqrsleythlelgacgtipvfwks-tgenlkfrvdntpltshdsgiiwfdendmest 357 (401)
T 1xv5_A 279 SEMLERMSKSGFGYQLSKLNQKYLQRSLEYTHLELGACGTIPVFWKS-TGENLKFRVDNTPLTSHDSGIIWFDENDMEST 357 (401)
T ss_dssp HHHHHHHHTEEEEEECCCCCGGGCSSCCCHHHHHHHHHTSEEEEEHH-HHHHSBCTTTCCBGGGSCCSCEEECTTCHHHH
T ss_pred HHHHHHhhhcCcccchHHHHHHHHHhhhhhheeecccccceeeeecc-cCcceEEEecCCcccccCCceEEecCCchHHH
Confidence 4444667777777666642 3566788999999998887764 0222222 322222223345 46888898999
Q ss_pred HHHHHHHhcCHHHHHHHHHHHHh
Q 011163 447 SQALEEIKNNPLSWKRKIKDAML 469 (492)
Q Consensus 447 ~~ai~~~~~~~~~~~~~~~~a~~ 469 (492)
-+.|..+-+|..++.+-.+.|.+
T Consensus 358 ferikelssdralydrerekaye 380 (401)
T 1xv5_A 358 FERIKELSSDRALYDREREKAYE 380 (401)
T ss_dssp HHHHHHHHTCHHHHHHHHHHHHH
T ss_pred HHHHHHhccchhhhhHHHHHHHH
Confidence 99999998999988877777654
No 83
>2v4n_A Multifunctional protein SUR E; hydrolase, surviVal protein, stationary phase, phosph mononucleotidase, divalent metal ION; 1.7A {Salmonella typhimurium} PDB: 2v4o_A
Probab=67.97 E-value=4.8 Score=36.34 Aligned_cols=39 Identities=21% Similarity=0.163 Sum_probs=29.1
Q ss_pred CceEEEEeeccccccccCcHHHHHhHHHHHHHHCCCeEEEEeecCCC
Q 011163 8 GFHIIHICTEMDPLVSIGSLASYVTGLSGALQRKGHLVEVILPKYAC 54 (492)
Q Consensus 8 ~mkIl~v~~~~~p~~~~GG~~~~~~~l~~~L~~~Gh~V~vi~~~~~~ 54 (492)
.||||+.+++.. ...-+..|+++|.+.| +|.|++|....
T Consensus 1 ~M~ILlTNDDGi-------~apGi~aL~~~L~~~g-~V~VVAP~~~~ 39 (254)
T 2v4n_A 1 SMRILLSNDDGV-------HAPGIQTLAKALREFA-DVQVVAPDRNR 39 (254)
T ss_dssp CCEEEEECSSCT-------TCHHHHHHHHHHTTTS-EEEEEEESSCC
T ss_pred CCeEEEEcCCCC-------CCHHHHHHHHHHHhCC-cEEEEeeCCCC
Confidence 489999887632 2334777888888876 99999997653
No 84
>3to5_A CHEY homolog; alpha(5)beta(5), chemotaxis, FLIM, phosphorylation, motor AC signaling protein; 1.65A {Vibrio cholerae}
Probab=67.31 E-value=45 Score=26.44 Aligned_cols=114 Identities=11% Similarity=0.091 Sum_probs=67.4
Q ss_pred cCcEEEEEecCCChhHHHHHHHHHHHhCCCeEEEEeccCHHHHHHHHh--cCCEEEECCC-CCCCchHHHHHhh-----c
Q 011163 335 RGIQFVFTGTNKLPSASRALVSFQEELKDGIVIFVDSYDDALLHLIFS--GSDIILCHSF-HDPLLQVPLKALK-----Y 406 (492)
Q Consensus 335 ~~~~lvivG~g~~~~~~~~l~~~~~~~~~~~v~~~~~~~~~~~~~~~~--~adi~v~pS~-~E~~glv~lEAma-----~ 406 (492)
++.+++||=+ ++...+.++...+..+-..|.. .-+..+.-+.+. .-|+.++=-. -+--|+-+++.+. .
T Consensus 11 k~~rILiVDD--~~~~r~~l~~~L~~~G~~~v~~--a~~g~~al~~~~~~~~DlillD~~MP~mdG~el~~~ir~~~~~~ 86 (134)
T 3to5_A 11 KNMKILIVDD--FSTMRRIVKNLLRDLGFNNTQE--ADDGLTALPMLKKGDFDFVVTDWNMPGMQGIDLLKNIRADEELK 86 (134)
T ss_dssp TTCCEEEECS--CHHHHHHHHHHHHHTTCCCEEE--ESSHHHHHHHHHHHCCSEEEEESCCSSSCHHHHHHHHHHSTTTT
T ss_pred CCCEEEEEeC--CHHHHHHHHHHHHHcCCcEEEE--ECCHHHHHHHHHhCCCCEEEEcCCCCCCCHHHHHHHHHhCCCCC
Confidence 3678888864 3455666666666653223432 223333223332 3577665433 3456777777764 4
Q ss_pred CCceEEEecCCCcccccccccccccceeeeeecCCCHHHHHHHHHHHhc
Q 011163 407 GAAPIAVTSSDIEFRHFAEFDHESTRFSRFISSTFGNISLSQALEEIKN 455 (492)
Q Consensus 407 G~PvV~~~~~~gg~~e~v~~~~~~~g~~G~~~~~~~~~~l~~ai~~~~~ 455 (492)
.+|+|.... -+-.+.+... ...|.++|+..|.+++.|.++|.++++
T Consensus 87 ~ipvI~lTa--~~~~~~~~~~-~~~Ga~~yl~KP~~~~~L~~~i~~~l~ 132 (134)
T 3to5_A 87 HLPVLMITA--EAKREQIIEA-AQAGVNGYIVKPFTAATLKEKLDKIFE 132 (134)
T ss_dssp TCCEEEEES--SCCHHHHHHH-HHTTCCEEEESSCCHHHHHHHHHHHCC
T ss_pred CCeEEEEEC--CCCHHHHHHH-HHCCCCEEEECCCCHHHHHHHHHHHHh
Confidence 678887654 3333332211 114678899999999999999998864
No 85
>1f4p_A Flavodoxin; electron transport, flavoprotein, FMN, 3D-STRCTURE, anisotropic refinement, redox protein; HET: FMN; 1.30A {Desulfovibrio vulgaris} SCOP: c.23.5.1 PDB: 1bu5_A* 1c7f_A* 1c7e_A* 1akr_A* 1fx1_A* 1akt_A* 1akq_A* 1aku_A* 1akv_A* 1azl_A* 1j8q_A* 2fx2_A* 3fx2_A* 4fx2_A* 5fx2_A* 1akw_A* 1i1o_A* 1wsw_A* 1wsb_A* 1xyv_A* ...
Probab=66.14 E-value=7.3 Score=31.46 Aligned_cols=38 Identities=11% Similarity=0.064 Sum_probs=31.0
Q ss_pred ceEEEEeeccccccccCcHHHHHhHHHHHHHHCCCeEEEEeec
Q 011163 9 FHIIHICTEMDPLVSIGSLASYVTGLSGALQRKGHLVEVILPK 51 (492)
Q Consensus 9 mkIl~v~~~~~p~~~~GG~~~~~~~l~~~L~~~Gh~V~vi~~~ 51 (492)
|||+++.. . ..|.+..+...+++.+.+.|++|.++-..
T Consensus 1 mki~iiy~--S---~~Gnt~~~a~~i~~~l~~~g~~v~~~~~~ 38 (147)
T 1f4p_A 1 PKALIVYG--S---TTGNTEYTAETIARELADAGYEVDSRDAA 38 (147)
T ss_dssp CEEEEEEE--C---SSSHHHHHHHHHHHHHHHHTCEEEEEEGG
T ss_pred CeEEEEEE--C---CcCHHHHHHHHHHHHHHhcCCeeEEEehh
Confidence 78888764 2 35889999999999999999999888643
No 86
>3nbm_A PTS system, lactose-specific IIBC components; PTS_IIB_LACTOSE, phosphoenolpyruvate:carbohydrate system, P- phosphorylation; HET: MSE; 1.30A {Streptococcus pneumoniae}
Probab=66.04 E-value=11 Score=29.04 Aligned_cols=42 Identities=12% Similarity=0.211 Sum_probs=28.5
Q ss_pred CCCceEEEEeeccccccccCcHHHHHhHHHHHHHHCCCeEEEEeecCC
Q 011163 6 RNGFHIIHICTEMDPLVSIGSLASYVTGLSGALQRKGHLVEVILPKYA 53 (492)
Q Consensus 6 ~~~mkIl~v~~~~~p~~~~GG~~~~~~~l~~~L~~~Gh~V~vi~~~~~ 53 (492)
.+.|||+++|.. ..+.+..+..+-++..++|.+|.+.+..++
T Consensus 4 ~~~mkIlL~C~a------GmSTsllv~km~~~a~~~gi~v~i~a~~~~ 45 (108)
T 3nbm_A 4 SKELKVLVLCAG------SGTSAQLANAINEGANLTEVRVIANSGAYG 45 (108)
T ss_dssp -CCEEEEEEESS------SSHHHHHHHHHHHHHHHHTCSEEEEEEETT
T ss_pred ccCceEEEECCC------CCCHHHHHHHHHHHHHHCCCceEEEEcchH
Confidence 457999999972 133444555666666778999999875444
No 87
>2vch_A Hydroquinone glucosyltransferase; glycosyltransferase, N-glucosyltransferase, UDP-glucose- dependent, plant glycosyltransferase; HET: UDP; 1.45A {Arabidopsis thaliana} SCOP: c.87.1.10 PDB: 2vce_A* 2vg8_A*
Probab=65.37 E-value=5 Score=40.14 Aligned_cols=41 Identities=15% Similarity=0.074 Sum_probs=29.7
Q ss_pred CCCceEEEEeeccccccccCcHHHHHhHHHHHHHHC-CCeEEEEeecC
Q 011163 6 RNGFHIIHICTEMDPLVSIGSLASYVTGLSGALQRK-GHLVEVILPKY 52 (492)
Q Consensus 6 ~~~mkIl~v~~~~~p~~~~GG~~~~~~~l~~~L~~~-Gh~V~vi~~~~ 52 (492)
+++|||+++.. | ..|=-.-+..|+++|+++ ||+|+++++..
T Consensus 4 ~~~~~vl~~p~---p---~~GHv~P~l~La~~L~~r~Gh~Vt~~t~~~ 45 (480)
T 2vch_A 4 SKTPHVAIIPS---P---GMGHLIPLVEFAKRLVHLHGLTVTFVIAGE 45 (480)
T ss_dssp --CCEEEEECC---S---CHHHHHHHHHHHHHHHHHHCCEEEEEECCS
T ss_pred CCCcEEEEecC---c---chhHHHHHHHHHHHHHhCCCCEEEEEECCC
Confidence 34478888653 2 234555678999999998 99999998764
No 88
>3jte_A Response regulator receiver protein; structural genomics, nysgrc, response regulator receiver DOM target 11226E, PSI-2; 1.90A {Clostridium thermocellum atcc 27405}
Probab=65.13 E-value=47 Score=25.83 Aligned_cols=112 Identities=13% Similarity=0.018 Sum_probs=65.9
Q ss_pred cEEEEEecCCChhHHHHHHHHHHHhCCCeEEEEeccCHHHHHHHHh----cCCEEEECCC-CCCCchHHHHHhh---cCC
Q 011163 337 IQFVFTGTNKLPSASRALVSFQEELKDGIVIFVDSYDDALLHLIFS----GSDIILCHSF-HDPLLQVPLKALK---YGA 408 (492)
Q Consensus 337 ~~lvivG~g~~~~~~~~l~~~~~~~~~~~v~~~~~~~~~~~~~~~~----~adi~v~pS~-~E~~glv~lEAma---~G~ 408 (492)
.+++|+.+ ++...+.++...+..+ ..+.. ..+.++....+. ..|++++-.. .+.-|+.+++.+. ..+
T Consensus 4 ~~ilivdd--~~~~~~~l~~~l~~~g-~~v~~--~~~~~~a~~~~~~~~~~~dlvi~d~~l~~~~g~~~~~~l~~~~~~~ 78 (143)
T 3jte_A 4 AKILVIDD--ESTILQNIKFLLEIDG-NEVLT--ASSSTEGLRIFTENCNSIDVVITDMKMPKLSGMDILREIKKITPHM 78 (143)
T ss_dssp CEEEEECS--CHHHHHHHHHHHHHTT-CEEEE--ESSHHHHHHHHHHTTTTCCEEEEESCCSSSCHHHHHHHHHHHCTTC
T ss_pred CEEEEEcC--CHHHHHHHHHHHHhCC-ceEEE--eCCHHHHHHHHHhCCCCCCEEEEeCCCCCCcHHHHHHHHHHhCCCC
Confidence 56777773 3455666777666653 34432 223333333333 5788877544 4556666666553 367
Q ss_pred ceEEEecCCCcccccccccccccceeeeeecCCCHHHHHHHHHHHhcC
Q 011163 409 APIAVTSSDIEFRHFAEFDHESTRFSRFISSTFGNISLSQALEEIKNN 456 (492)
Q Consensus 409 PvV~~~~~~gg~~e~v~~~~~~~g~~G~~~~~~~~~~l~~ai~~~~~~ 456 (492)
|+|+... ..-.+.+... ...|..+|+..|.+.+.|..+|..+++.
T Consensus 79 ~ii~ls~--~~~~~~~~~~-~~~g~~~~l~kp~~~~~l~~~l~~~~~~ 123 (143)
T 3jte_A 79 AVIILTG--HGDLDNAILA-MKEGAFEYLRKPVTAQDLSIAINNAINR 123 (143)
T ss_dssp EEEEEEC--TTCHHHHHHH-HHTTCSEEEESSCCHHHHHHHHHHHHHH
T ss_pred eEEEEEC--CCCHHHHHHH-HHhCcceeEeCCCCHHHHHHHHHHHHHH
Confidence 7777654 2222222111 1145678999999999999999998753
No 89
>2pln_A HP1043, response regulator; signaling protein; 1.80A {Helicobacter pylori} PDB: 2hqo_A
Probab=64.37 E-value=47 Score=25.60 Aligned_cols=109 Identities=6% Similarity=-0.037 Sum_probs=57.9
Q ss_pred CcEEEEEecCCChhHHHHHHHHHHHhCCCeEEEEeccCHHHHHHHH--hcCCEEEECCCCCCCchHHHHHhh--c-CCce
Q 011163 336 GIQFVFTGTNKLPSASRALVSFQEELKDGIVIFVDSYDDALLHLIF--SGSDIILCHSFHDPLLQVPLKALK--Y-GAAP 410 (492)
Q Consensus 336 ~~~lvivG~g~~~~~~~~l~~~~~~~~~~~v~~~~~~~~~~~~~~~--~~adi~v~pS~~E~~glv~lEAma--~-G~Pv 410 (492)
..+++|+.+ ++...+.++...+..+ -.|.. .-+.++....+ ...|++++| +.-|+-+++.+. . .+|+
T Consensus 18 ~~~ilivdd--~~~~~~~l~~~L~~~g-~~v~~--~~~~~~al~~l~~~~~dlvi~~---~~~g~~~~~~l~~~~~~~~i 89 (137)
T 2pln_A 18 SMRVLLIEK--NSVLGGEIEKGLNVKG-FMADV--TESLEDGEYLMDIRNYDLVMVS---DKNALSFVSRIKEKHSSIVV 89 (137)
T ss_dssp CSEEEEECS--CHHHHHHHHHHHHHTT-CEEEE--ESCHHHHHHHHHHSCCSEEEEC---STTHHHHHHHHHHHSTTSEE
T ss_pred CCeEEEEeC--CHHHHHHHHHHHHHcC-cEEEE--eCCHHHHHHHHHcCCCCEEEEc---CccHHHHHHHHHhcCCCccE
Confidence 356666653 2344455555555432 23332 22222222222 235777733 234555665554 3 6777
Q ss_pred EEEecCCCcccccccccccccceeeeeecCC-CHHHHHHHHHHHhc
Q 011163 411 IAVTSSDIEFRHFAEFDHESTRFSRFISSTF-GNISLSQALEEIKN 455 (492)
Q Consensus 411 V~~~~~~gg~~e~v~~~~~~~g~~G~~~~~~-~~~~l~~ai~~~~~ 455 (492)
|+... ..-.+.+... ...|..+|+..|. +.+.|.++|..++.
T Consensus 90 i~ls~--~~~~~~~~~~-~~~g~~~~l~kP~~~~~~l~~~i~~~~~ 132 (137)
T 2pln_A 90 LVSSD--NPTSEEEVHA-FEQGADDYIAKPYRSIKALVARIEARLR 132 (137)
T ss_dssp EEEES--SCCHHHHHHH-HHTTCSEEEESSCSCHHHHHHHHHHHTC
T ss_pred EEEeC--CCCHHHHHHH-HHcCCceeeeCCCCCHHHHHHHHHHHHh
Confidence 77653 2222222111 1145678999999 99999999998865
No 90
>3mcu_A Dipicolinate synthase, B chain; NESG, structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium; 2.30A {Bacillus cereus}
Probab=63.44 E-value=6.6 Score=34.23 Aligned_cols=36 Identities=28% Similarity=0.225 Sum_probs=29.5
Q ss_pred CceEEEEeeccccccccCcHHHH--HhHHHHHHHHCCCeEEEEeec
Q 011163 8 GFHIIHICTEMDPLVSIGSLASY--VTGLSGALQRKGHLVEVILPK 51 (492)
Q Consensus 8 ~mkIl~v~~~~~p~~~~GG~~~~--~~~l~~~L~~~Gh~V~vi~~~ 51 (492)
.+||++..+ ||...| ..+|.+.|.+.|++|.++...
T Consensus 5 ~k~IllgiT--------Gsiaayk~~~~ll~~L~~~g~eV~vv~T~ 42 (207)
T 3mcu_A 5 GKRIGFGFT--------GSHCTYEEVMPHLEKLIAEGAEVRPVVSY 42 (207)
T ss_dssp TCEEEEEEC--------SCGGGGTTSHHHHHHHHHTTCEEEEEECC
T ss_pred CCEEEEEEE--------ChHHHHHHHHHHHHHHHhCCCEEEEEEeh
Confidence 357877554 777888 789999999999999999764
No 91
>2qzj_A Two-component response regulator; 11017X, PSI-II, structural genomics; 2.89A {Clostridium difficile}
Probab=61.72 E-value=47 Score=25.72 Aligned_cols=112 Identities=12% Similarity=-0.007 Sum_probs=60.8
Q ss_pred CcEEEEEecCCChhHHHHHHHHHHHhCCCeEEEEeccCHHHHHHHHh--cCCEEEECCC-CCCCchHHHHHhhc--CCce
Q 011163 336 GIQFVFTGTNKLPSASRALVSFQEELKDGIVIFVDSYDDALLHLIFS--GSDIILCHSF-HDPLLQVPLKALKY--GAAP 410 (492)
Q Consensus 336 ~~~lvivG~g~~~~~~~~l~~~~~~~~~~~v~~~~~~~~~~~~~~~~--~adi~v~pS~-~E~~glv~lEAma~--G~Pv 410 (492)
..+++|+.+ ++...+.++...+..+ -.|.. ..+.++....+. ..|++++=-. -+..|+-+++.+.. .+|+
T Consensus 4 ~~~Ilivdd--~~~~~~~l~~~L~~~g-~~v~~--~~~~~~al~~~~~~~~dlvllD~~l~~~~g~~l~~~l~~~~~~~i 78 (136)
T 2qzj_A 4 QTKILIIDG--DKDNCQKLKGFLEEKG-ISIDL--AYNCEEAIGKIFSNKYDLIFLEIILSDGDGWTLCKKIRNVTTCPI 78 (136)
T ss_dssp CCEEEEECS--CHHHHHHHHHHHHTTT-CEEEE--ESSHHHHHHHHHHCCCSEEEEESEETTEEHHHHHHHHHTTCCCCE
T ss_pred CCeEEEEcC--CHHHHHHHHHHHHHCC-CEEEE--ECCHHHHHHHHHhcCCCEEEEeCCCCCCCHHHHHHHHccCCCCCE
Confidence 356777763 2344555665555432 23332 223333223322 4587776433 23356666666532 5777
Q ss_pred EEEecCCCcccccccccccccceeeeeecCCCHHHHHHHHHHHhc
Q 011163 411 IAVTSSDIEFRHFAEFDHESTRFSRFISSTFGNISLSQALEEIKN 455 (492)
Q Consensus 411 V~~~~~~gg~~e~v~~~~~~~g~~G~~~~~~~~~~l~~ai~~~~~ 455 (492)
|+... ..-.+.+... ...|..+|+..|.+.+.|..+++.++.
T Consensus 79 i~ls~--~~~~~~~~~~-~~~ga~~~l~KP~~~~~L~~~l~~~~~ 120 (136)
T 2qzj_A 79 VYMTY--INEDQSILNA-LNSGGDDYLIKPLNLEILYAKVKAILR 120 (136)
T ss_dssp EEEES--CCCHHHHHHH-HHTTCCEEEESSCCHHHHHHHHHHHHH
T ss_pred EEEEc--CCCHHHHHHH-HHcCCcEEEECCCCHHHHHHHHHHHHH
Confidence 76543 2222222111 114667899999999999999988764
No 92
>3h1g_A Chemotaxis protein CHEY homolog; sulfate-bound CHEY, cytoplasm, flagellar rotatio magnesium, metal-binding, phosphoprotein; 1.70A {Helicobacter pylori} SCOP: c.23.1.1 PDB: 3gwg_A 3h1e_A 3h1f_A
Probab=61.58 E-value=51 Score=25.11 Aligned_cols=112 Identities=10% Similarity=0.032 Sum_probs=64.9
Q ss_pred cEEEEEecCCChhHHHHHHHHHHHhCCCeEEEEeccCHH-HHHHHHh--cCCEEEECCC-CCCCchHHHHHhhc-----C
Q 011163 337 IQFVFTGTNKLPSASRALVSFQEELKDGIVIFVDSYDDA-LLHLIFS--GSDIILCHSF-HDPLLQVPLKALKY-----G 407 (492)
Q Consensus 337 ~~lvivG~g~~~~~~~~l~~~~~~~~~~~v~~~~~~~~~-~~~~~~~--~adi~v~pS~-~E~~glv~lEAma~-----G 407 (492)
.+++|+.+ ++...+.++...++.+-..+.. ..+.. .+..+.. ..|++++=.. -+.-|+-+++.+.. .
T Consensus 6 ~~iLivdd--~~~~~~~l~~~L~~~g~~~v~~--~~~~~~a~~~~~~~~~~dlvi~D~~~p~~~g~~~~~~lr~~~~~~~ 81 (129)
T 3h1g_A 6 MKLLVVDD--SSTMRRIIKNTLSRLGYEDVLE--AEHGVEAWEKLDANADTKVLITDWNMPEMNGLDLVKKVRSDSRFKE 81 (129)
T ss_dssp CCEEEECS--CHHHHHHHHHHHHHTTCCCEEE--ESSHHHHHHHHHHCTTCCEEEECSCCSSSCHHHHHHHHHTSTTCTT
T ss_pred cEEEEEeC--CHHHHHHHHHHHHHcCCcEEEE--eCCHHHHHHHHHhCCCCCEEEEeCCCCCCCHHHHHHHHHhcCCCCC
Confidence 56777764 3455666766666653223432 22332 2222322 4688776433 35567777777643 5
Q ss_pred CceEEEecCCCcccccccccccccceeeeeecCCCHHHHHHHHHHHhc
Q 011163 408 AAPIAVTSSDIEFRHFAEFDHESTRFSRFISSTFGNISLSQALEEIKN 455 (492)
Q Consensus 408 ~PvV~~~~~~gg~~e~v~~~~~~~g~~G~~~~~~~~~~l~~ai~~~~~ 455 (492)
+|+|+... ..-.+.+... ...|..+|+..|.+++.|.++|+.++.
T Consensus 82 ~pii~~s~--~~~~~~~~~~-~~~g~~~~l~KP~~~~~L~~~l~~~l~ 126 (129)
T 3h1g_A 82 IPIIMITA--EGGKAEVITA-LKAGVNNYIVKPFTPQVLKEKLEVVLG 126 (129)
T ss_dssp CCEEEEES--CCSHHHHHHH-HHHTCCEEEESCCCHHHHHHHHHHHHC
T ss_pred CeEEEEeC--CCChHHHHHH-HHcCccEEEeCCCCHHHHHHHHHHHhc
Confidence 67777654 2222222110 114667899999999999999998875
No 93
>3ew7_A LMO0794 protein; Q8Y8U8_lismo, putative NAD-dependent epimerase/dehydratase, LMR162, NESG, structural genomics, PSI-2; 2.73A {Listeria monocytogenes}
Probab=61.45 E-value=7.4 Score=33.67 Aligned_cols=33 Identities=21% Similarity=0.303 Sum_probs=24.4
Q ss_pred ceEEEEeeccccccccCcHHHHHhHHHHHHHHCCCeEEEEeec
Q 011163 9 FHIIHICTEMDPLVSIGSLASYVTGLSGALQRKGHLVEVILPK 51 (492)
Q Consensus 9 mkIl~v~~~~~p~~~~GG~~~~~~~l~~~L~~~Gh~V~vi~~~ 51 (492)
|||+++.. +|++| ..+++.|.++||+|.++...
T Consensus 1 MkvlVtGa-------tG~iG---~~l~~~L~~~g~~V~~~~R~ 33 (221)
T 3ew7_A 1 MKIGIIGA-------TGRAG---SRILEEAKNRGHEVTAIVRN 33 (221)
T ss_dssp CEEEEETT-------TSHHH---HHHHHHHHHTTCEEEEEESC
T ss_pred CeEEEEcC-------CchhH---HHHHHHHHhCCCEEEEEEcC
Confidence 78766432 46666 46778899999999998764
No 94
>3h2s_A Putative NADH-flavin reductase; Q03B84, NESG, LCR19, structural genomics, PSI-2, protein structure initiative; HET: NDP; 1.78A {Lactobacillus casei atcc 334}
Probab=60.83 E-value=7.7 Score=33.72 Aligned_cols=33 Identities=18% Similarity=0.379 Sum_probs=24.1
Q ss_pred ceEEEEeeccccccccCcHHHHHhHHHHHHHHCCCeEEEEeec
Q 011163 9 FHIIHICTEMDPLVSIGSLASYVTGLSGALQRKGHLVEVILPK 51 (492)
Q Consensus 9 mkIl~v~~~~~p~~~~GG~~~~~~~l~~~L~~~Gh~V~vi~~~ 51 (492)
|||+++. .+|++| ..++++|.++|++|.++...
T Consensus 1 MkilVtG-------atG~iG---~~l~~~L~~~g~~V~~~~R~ 33 (224)
T 3h2s_A 1 MKIAVLG-------ATGRAG---SAIVAEARRRGHEVLAVVRD 33 (224)
T ss_dssp CEEEEET-------TTSHHH---HHHHHHHHHTTCEEEEEESC
T ss_pred CEEEEEc-------CCCHHH---HHHHHHHHHCCCEEEEEEec
Confidence 7876533 236666 56778899999999998754
No 95
>1rpn_A GDP-mannose 4,6-dehydratase; short-chain dehydrogenase/reductase, rossmann fold, lyase; HET: NDP GDP; 2.15A {Pseudomonas aeruginosa} SCOP: c.2.1.2
Probab=60.60 E-value=7.9 Score=36.16 Aligned_cols=39 Identities=15% Similarity=0.024 Sum_probs=24.1
Q ss_pred cccCCCceEEEEeeccccccccCcHHHHHhHHHHHHHHCCCeEEEEeec
Q 011163 3 KWLRNGFHIIHICTEMDPLVSIGSLASYVTGLSGALQRKGHLVEVILPK 51 (492)
Q Consensus 3 ~~~~~~mkIl~v~~~~~p~~~~GG~~~~~~~l~~~L~~~Gh~V~vi~~~ 51 (492)
|.+.+.||||+.. ..|++| ..+++.|.++||+|.++...
T Consensus 9 ~~~~~~~~vlVTG-------atG~iG---~~l~~~L~~~g~~V~~~~r~ 47 (335)
T 1rpn_A 9 HHGSMTRSALVTG-------ITGQDG---AYLAKLLLEKGYRVHGLVAR 47 (335)
T ss_dssp ------CEEEEET-------TTSHHH---HHHHHHHHHTTCEEEEEECC
T ss_pred cccccCCeEEEEC-------CCChHH---HHHHHHHHHCCCeEEEEeCC
Confidence 5566778986633 235555 56778899999999988754
No 96
>3k9g_A PF-32 protein; ssgcid, SBRI, decode biostructures, UW, NIH, niaid, borellia burgdorferi, plasmid partition protein, iodide; 2.25A {Borrelia burgdorferi} PDB: 3k9h_A
Probab=59.69 E-value=6.3 Score=35.65 Aligned_cols=42 Identities=21% Similarity=0.127 Sum_probs=28.5
Q ss_pred cccCCCceEEEEeeccccccccCcHH--HHHhHHHHHHHHCCCeEEEEeec
Q 011163 3 KWLRNGFHIIHICTEMDPLVSIGSLA--SYVTGLSGALQRKGHLVEVILPK 51 (492)
Q Consensus 3 ~~~~~~mkIl~v~~~~~p~~~~GG~~--~~~~~l~~~L~~~Gh~V~vi~~~ 51 (492)
++.+++|||+.|+. ..||+| +.+.+|+.+|+ +|.+|.++=.+
T Consensus 21 ~~~~~~~~vI~v~s------~kGGvGKTT~a~~LA~~la-~g~~VlliD~D 64 (267)
T 3k9g_A 21 SMDNKKPKIITIAS------IKGGVGKSTSAIILATLLS-KNNKVLLIDMD 64 (267)
T ss_dssp -----CCEEEEECC------SSSSSCHHHHHHHHHHHHT-TTSCEEEEEEC
T ss_pred cCCCCCCeEEEEEe------CCCCchHHHHHHHHHHHHH-CCCCEEEEECC
Confidence 34556688877775 247766 55678999999 99999999654
No 97
>2rjn_A Response regulator receiver:metal-dependent phosphohydrolase, HD subdomain; structural genomics, oceanospirillum SP. MED92; 2.10A {Neptuniibacter caesariensis}
Probab=59.03 E-value=65 Score=25.43 Aligned_cols=113 Identities=8% Similarity=0.010 Sum_probs=62.9
Q ss_pred CcEEEEEecCCChhHHHHHHHHHHHhCCCeEEEEeccCHHHHHHHHh--cCCEEEECCC-CCCCchHHHHHhh---cCCc
Q 011163 336 GIQFVFTGTNKLPSASRALVSFQEELKDGIVIFVDSYDDALLHLIFS--GSDIILCHSF-HDPLLQVPLKALK---YGAA 409 (492)
Q Consensus 336 ~~~lvivG~g~~~~~~~~l~~~~~~~~~~~v~~~~~~~~~~~~~~~~--~adi~v~pS~-~E~~glv~lEAma---~G~P 409 (492)
..+++|+.+. +...+.++...+..+ -.|.. .-+.++....+. ..|++++-.. .+.-|+-+++.+. ..+|
T Consensus 7 ~~~iLivdd~--~~~~~~l~~~L~~~g-~~v~~--~~~~~~a~~~l~~~~~dlvi~d~~l~~~~g~~~~~~l~~~~~~~~ 81 (154)
T 2rjn_A 7 NYTVMLVDDE--QPILNSLKRLIKRLG-CNIIT--FTSPLDALEALKGTSVQLVISDMRMPEMGGEVFLEQVAKSYPDIE 81 (154)
T ss_dssp CCEEEEECSC--HHHHHHHHHHHHTTT-CEEEE--ESCHHHHHHHHTTSCCSEEEEESSCSSSCHHHHHHHHHHHCTTSE
T ss_pred CCeEEEEcCC--HHHHHHHHHHHHHcC-CeEEE--eCCHHHHHHHHhcCCCCEEEEecCCCCCCHHHHHHHHHHhCCCCc
Confidence 4677777632 445555666555532 33432 233333334433 3578776543 3345666666553 3677
Q ss_pred eEEEecCCCcccccccccccccc-eeeeeecCCCHHHHHHHHHHHhcC
Q 011163 410 PIAVTSSDIEFRHFAEFDHESTR-FSRFISSTFGNISLSQALEEIKNN 456 (492)
Q Consensus 410 vV~~~~~~gg~~e~v~~~~~~~g-~~G~~~~~~~~~~l~~ai~~~~~~ 456 (492)
+|+... ..-.+.+... ...| ..+++..|.+.+.|..+|..++..
T Consensus 82 ii~ls~--~~~~~~~~~~-~~~g~~~~~l~kP~~~~~L~~~i~~~~~~ 126 (154)
T 2rjn_A 82 RVVISG--YADAQATIDA-VNRGKISRFLLKPWEDEDVFKVVEKGLQL 126 (154)
T ss_dssp EEEEEC--GGGHHHHHHH-HHTTCCSEEEESSCCHHHHHHHHHHHHHH
T ss_pred EEEEec--CCCHHHHHHH-HhccchheeeeCCCCHHHHHHHHHHHHHH
Confidence 777543 2222222111 1123 568999999999999999988753
No 98
>3kjh_A CO dehydrogenase/acetyl-COA synthase complex, accessory protein COOC; Zn-bound dimer, nickel binding protein, ATPase; 1.90A {Carboxydothermus hydrogenoformans} PDB: 3kjg_A* 3kje_A 3kji_A*
Probab=59.02 E-value=8.3 Score=34.17 Aligned_cols=36 Identities=8% Similarity=0.069 Sum_probs=27.6
Q ss_pred ceEEEEeeccccccccCcHHHH--HhHHHHHHHHCCCeEEEEeecC
Q 011163 9 FHIIHICTEMDPLVSIGSLASY--VTGLSGALQRKGHLVEVILPKY 52 (492)
Q Consensus 9 mkIl~v~~~~~p~~~~GG~~~~--~~~l~~~L~~~Gh~V~vi~~~~ 52 (492)
|||++ +. .||+|+. +.+|+..|+++|++|.++=.+.
T Consensus 1 mkI~v-s~-------kGGvGKTt~a~~LA~~la~~g~~VlliD~D~ 38 (254)
T 3kjh_A 1 MKLAV-AG-------KGGVGKTTVAAGLIKIMASDYDKIYAVDGDP 38 (254)
T ss_dssp CEEEE-EC-------SSSHHHHHHHHHHHHHHTTTCSCEEEEEECT
T ss_pred CEEEE-ec-------CCCCCHHHHHHHHHHHHHHCCCeEEEEeCCC
Confidence 78887 53 3777654 5679999999999999886553
No 99
>4dad_A Putative pilus assembly-related protein; response regulator receiver domain, CHEY-related protein, ST genomics; 2.50A {Burkholderia pseudomallei} PDB: 4dn6_A
Probab=58.62 E-value=56 Score=25.49 Aligned_cols=70 Identities=14% Similarity=0.071 Sum_probs=41.4
Q ss_pred cCCEEEECCC-CCCCchHHHHHhh---cCCceEEEecCCCcccccccccccccceeeeeecCCCHHHHHHHHHHHhc
Q 011163 383 GSDIILCHSF-HDPLLQVPLKALK---YGAAPIAVTSSDIEFRHFAEFDHESTRFSRFISSTFGNISLSQALEEIKN 455 (492)
Q Consensus 383 ~adi~v~pS~-~E~~glv~lEAma---~G~PvV~~~~~~gg~~e~v~~~~~~~g~~G~~~~~~~~~~l~~ai~~~~~ 455 (492)
..|++++=-. -+.-|+-+++.+. ..+|+|+... ..-.+.+... ...|..+|+..|.+.+.|..+|..++.
T Consensus 67 ~~dlvi~D~~l~~~~g~~~~~~l~~~~~~~~ii~lt~--~~~~~~~~~~-~~~ga~~~l~Kp~~~~~L~~~i~~~~~ 140 (146)
T 4dad_A 67 AFDILMIDGAALDTAELAAIEKLSRLHPGLTCLLVTT--DASSQTLLDA-MRAGVRDVLRWPLEPRALDDALKRAAA 140 (146)
T ss_dssp TCSEEEEECTTCCHHHHHHHHHHHHHCTTCEEEEEES--CCCHHHHHHH-HTTTEEEEEESSCCHHHHHHHHHHHHH
T ss_pred CCCEEEEeCCCCCccHHHHHHHHHHhCCCCcEEEEeC--CCCHHHHHHH-HHhCCceeEcCCCCHHHHHHHHHHHHh
Confidence 4577666433 2334555555443 3677777543 2222222111 114667899999999999999998864
No 100
>4dzz_A Plasmid partitioning protein PARF; deviant walker BOX, DNA segregation, unknown function; HET: ADP; 1.80A {Escherichia coli} PDB: 4e03_A* 4e07_A* 4e09_A*
Probab=58.28 E-value=9 Score=32.79 Aligned_cols=37 Identities=22% Similarity=0.328 Sum_probs=28.4
Q ss_pred ceEEEEeeccccccccCcHH--HHHhHHHHHHHHCCCeEEEEeec
Q 011163 9 FHIIHICTEMDPLVSIGSLA--SYVTGLSGALQRKGHLVEVILPK 51 (492)
Q Consensus 9 mkIl~v~~~~~p~~~~GG~~--~~~~~l~~~L~~~Gh~V~vi~~~ 51 (492)
|||+.|+.. .||+| +.+.+|+..|+++|.+|.++-.+
T Consensus 1 M~vi~v~s~------kgG~GKTt~a~~la~~la~~g~~vlliD~D 39 (206)
T 4dzz_A 1 MKVISFLNP------KGGSGKTTAVINIATALSRSGYNIAVVDTD 39 (206)
T ss_dssp CEEEEECCS------STTSSHHHHHHHHHHHHHHTTCCEEEEECC
T ss_pred CeEEEEEeC------CCCccHHHHHHHHHHHHHHCCCeEEEEECC
Confidence 788777752 36665 55678999999999999998754
No 101
>3gd5_A Otcase, ornithine carbamoyltransferase; structural genomics, NYSGXRC, target 9454P, operon, amino-acid biosynthesis, ARGI biosynthesis; 2.10A {Gloeobacter violaceus}
Probab=57.29 E-value=65 Score=30.02 Aligned_cols=104 Identities=11% Similarity=0.093 Sum_probs=64.0
Q ss_pred ecCCCCCCCcCCCCCcccccccCccCccChHHHHHHHHHHhCCCCCCCceEEEEEeccccccCHHHHHHHHHHHhHcCcE
Q 011163 259 APCGFDSSTWDPSNDKFLTENYCAEDMKGKTVCKVTLQQQLGLSKDASTIVVGCIFSDVSDVFLENLKAVVRGAKMRGIQ 338 (492)
Q Consensus 259 I~nGvd~~~f~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~lg~~~~~~~~~i~~~grl~~~Kg~~~li~a~~~l~~~~~~ 338 (492)
|-||-| +.++|. ..-.+--.+++.+|--. .+.+.++|-+. .=...++.++..+ +++
T Consensus 128 VINag~-~~~HPt---------------QaLaDl~Ti~e~~g~l~---glkva~vGD~~--rva~Sl~~~~~~~---G~~ 183 (323)
T 3gd5_A 128 VINALT-DHEHPC---------------QVVADLLTIRENFGRLA---GLKLAYVGDGN--NVAHSLLLGCAKV---GMS 183 (323)
T ss_dssp EEEEEC-SSCCHH---------------HHHHHHHHHHHHHSCCT---TCEEEEESCCC--HHHHHHHHHHHHH---TCE
T ss_pred EEeCCC-CCCCcH---------------HHHHHHHHHHHHhCCCC---CCEEEEECCCC--cHHHHHHHHHHHc---CCE
Confidence 567777 677774 11224456788887432 36788999872 2245666666555 689
Q ss_pred EEEEecCC---ChhHHHHHHHHHHHhCCCeEEEEeccCHHHHHHHHhcCCEEEECCC
Q 011163 339 FVFTGTNK---LPSASRALVSFQEELKDGIVIFVDSYDDALLHLIFSGSDIILCHSF 392 (492)
Q Consensus 339 lvivG~g~---~~~~~~~l~~~~~~~~~~~v~~~~~~~~~~~~~~~~~adi~v~pS~ 392 (492)
+.+++..+ ++...+..++.+++.+ ..+... .+. .+.+..||++....+
T Consensus 184 v~~~~P~~~~~~~~~~~~~~~~a~~~g-~~v~~~--~d~---~eav~~aDvvyt~~w 234 (323)
T 3gd5_A 184 IAVATPEGFTPDPAVSARASEIAGRTG-AEVQIL--RDP---FEAARGAHILYTDVW 234 (323)
T ss_dssp EEEECCTTCCCCHHHHHHHHHHHHHHT-CCEEEE--SCH---HHHHTTCSEEEECCC
T ss_pred EEEECCCcccCCHHHHHHHHHHHHHcC-CeEEEE--CCH---HHHhcCCCEEEEece
Confidence 99998542 2334445555555553 456543 232 245799999888765
No 102
>3h5i_A Response regulator/sensory box protein/ggdef domain protein; structural genomics, transcription, PSI-2; 1.90A {Carboxydothermus hydrogenoformans z-2901}
Probab=56.93 E-value=66 Score=24.89 Aligned_cols=112 Identities=10% Similarity=-0.042 Sum_probs=66.8
Q ss_pred CcEEEEEecCCChhHHHHHHHHHHHhCCCeEEEEeccCHHHHHHHHh---cCCEEEECCCC-C-CCchHHHHHhh--cCC
Q 011163 336 GIQFVFTGTNKLPSASRALVSFQEELKDGIVIFVDSYDDALLHLIFS---GSDIILCHSFH-D-PLLQVPLKALK--YGA 408 (492)
Q Consensus 336 ~~~lvivG~g~~~~~~~~l~~~~~~~~~~~v~~~~~~~~~~~~~~~~---~adi~v~pS~~-E-~~glv~lEAma--~G~ 408 (492)
+.+++|+.+ ++...+.++...+..+ -.|.. ..+.++....+. ..|++++=... + .-|+.+++.+. ..+
T Consensus 5 ~~~ilivdd--~~~~~~~l~~~L~~~g-~~v~~--~~~~~~a~~~l~~~~~~dlvi~D~~l~~~~~g~~~~~~l~~~~~~ 79 (140)
T 3h5i_A 5 DKKILIVED--SKFQAKTIANILNKYG-YTVEI--ALTGEAAVEKVSGGWYPDLILMDIELGEGMDGVQTALAIQQISEL 79 (140)
T ss_dssp -CEEEEECS--CHHHHHHHHHHHHHTT-CEEEE--ESSHHHHHHHHHTTCCCSEEEEESSCSSSCCHHHHHHHHHHHCCC
T ss_pred CcEEEEEeC--CHHHHHHHHHHHHHcC-CEEEE--ecChHHHHHHHhcCCCCCEEEEeccCCCCCCHHHHHHHHHhCCCC
Confidence 357777763 3455666666666652 34432 334333334442 35888876543 3 56776666654 477
Q ss_pred ceEEEecCCCcccccccccccccceeeeeecCCCHHHHHHHHHHHhc
Q 011163 409 APIAVTSSDIEFRHFAEFDHESTRFSRFISSTFGNISLSQALEEIKN 455 (492)
Q Consensus 409 PvV~~~~~~gg~~e~v~~~~~~~g~~G~~~~~~~~~~l~~ai~~~~~ 455 (492)
|+|+... ..-.+.+... ...|..+|+..|.+.+.|.++|..+++
T Consensus 80 ~ii~ls~--~~~~~~~~~~-~~~g~~~~l~KP~~~~~l~~~i~~~l~ 123 (140)
T 3h5i_A 80 PVVFLTA--HTEPAVVEKI-RSVTAYGYVMKSATEQVLITIVEMALR 123 (140)
T ss_dssp CEEEEES--SSSCCCCGGG-GGSCEEEEEETTCCHHHHHHHHHHHHH
T ss_pred CEEEEEC--CCCHHHHHHH-HhCCCcEEEeCCCCHHHHHHHHHHHHH
Confidence 8887654 2222332211 124677899999999999999998864
No 103
>3gt7_A Sensor protein; structural genomics, signal receiver domain, kinase, PSI-2, protein structure initiative; 2.30A {Syntrophus aciditrophicus SB}
Probab=56.82 E-value=72 Score=25.26 Aligned_cols=112 Identities=13% Similarity=0.051 Sum_probs=65.4
Q ss_pred CcEEEEEecCCChhHHHHHHHHHHHhCCCeEEEEeccCHHHHHHHHh--cCCEEEECCC-CCCCchHHHHHhh-----cC
Q 011163 336 GIQFVFTGTNKLPSASRALVSFQEELKDGIVIFVDSYDDALLHLIFS--GSDIILCHSF-HDPLLQVPLKALK-----YG 407 (492)
Q Consensus 336 ~~~lvivG~g~~~~~~~~l~~~~~~~~~~~v~~~~~~~~~~~~~~~~--~adi~v~pS~-~E~~glv~lEAma-----~G 407 (492)
..+++|+.+ ++...+.+++..+..+ -.|.. ..+.++....+. ..|++++-.. -+.-|+.+++.+. ..
T Consensus 7 ~~~ILivdd--~~~~~~~l~~~L~~~g-~~v~~--~~~~~~al~~l~~~~~dlii~D~~l~~~~g~~~~~~lr~~~~~~~ 81 (154)
T 3gt7_A 7 AGEILIVED--SPTQAEHLKHILEETG-YQTEH--VRNGREAVRFLSLTRPDLIISDVLMPEMDGYALCRWLKGQPDLRT 81 (154)
T ss_dssp CCEEEEECS--CHHHHHHHHHHHHTTT-CEEEE--ESSHHHHHHHHTTCCCSEEEEESCCSSSCHHHHHHHHHHSTTTTT
T ss_pred CCcEEEEeC--CHHHHHHHHHHHHHCC-CEEEE--eCCHHHHHHHHHhCCCCEEEEeCCCCCCCHHHHHHHHHhCCCcCC
Confidence 467778774 3445566666666542 33432 233333334443 3577777544 3456777777664 35
Q ss_pred CceEEEecCCCcccccccccccccceeeeeecCCCHHHHHHHHHHHhc
Q 011163 408 AAPIAVTSSDIEFRHFAEFDHESTRFSRFISSTFGNISLSQALEEIKN 455 (492)
Q Consensus 408 ~PvV~~~~~~gg~~e~v~~~~~~~g~~G~~~~~~~~~~l~~ai~~~~~ 455 (492)
+|+|+... ..-.+.+... ...|..+|+..|.+.+.|.++|..+++
T Consensus 82 ~pii~~s~--~~~~~~~~~~-~~~g~~~~l~KP~~~~~l~~~i~~~l~ 126 (154)
T 3gt7_A 82 IPVILLTI--LSDPRDVVRS-LECGADDFITKPCKDVVLASHVKRLLS 126 (154)
T ss_dssp SCEEEEEC--CCSHHHHHHH-HHHCCSEEEESSCCHHHHHHHHHHHHH
T ss_pred CCEEEEEC--CCChHHHHHH-HHCCCCEEEeCCCCHHHHHHHHHHHHH
Confidence 77777553 2222222111 113567899999999999999998874
No 104
>3hdg_A Uncharacterized protein; two-component sensor activity, response regulator, PSI-II, 11227F, NYSGXRC, structural genomics; 2.27A {Wolinella succinogenes} SCOP: c.23.1.0
Probab=56.68 E-value=65 Score=24.71 Aligned_cols=112 Identities=13% Similarity=0.062 Sum_probs=63.4
Q ss_pred CcEEEEEecCCChhHHHHHHHHHHHhCCCeEEEEeccCHHHHHHHH--hcCCEEEECCC-CCCCchHHHHHhh---cCCc
Q 011163 336 GIQFVFTGTNKLPSASRALVSFQEELKDGIVIFVDSYDDALLHLIF--SGSDIILCHSF-HDPLLQVPLKALK---YGAA 409 (492)
Q Consensus 336 ~~~lvivG~g~~~~~~~~l~~~~~~~~~~~v~~~~~~~~~~~~~~~--~~adi~v~pS~-~E~~glv~lEAma---~G~P 409 (492)
..+++|+.+. +...+.+++..+.. ...+... .+.++....+ ...|++++-.. .+.-|+.+++.+. ..+|
T Consensus 7 ~~~ilivdd~--~~~~~~l~~~L~~~-~~~v~~~--~~~~~a~~~l~~~~~dlvi~d~~l~~~~g~~~~~~l~~~~~~~~ 81 (137)
T 3hdg_A 7 ALKILIVEDD--TDAREWLSTIISNH-FPEVWSA--GDGEEGERLFGLHAPDVIITDIRMPKLGGLEMLDRIKAGGAKPY 81 (137)
T ss_dssp CCCEEEECSC--HHHHHHHHHHHHTT-CSCEEEE--SSHHHHHHHHHHHCCSEEEECSSCSSSCHHHHHHHHHHTTCCCE
T ss_pred ccEEEEEeCC--HHHHHHHHHHHHhc-CcEEEEE--CCHHHHHHHHhccCCCEEEEeCCCCCCCHHHHHHHHHhcCCCCc
Confidence 4677787742 34555566655553 2344433 2222222222 34688887654 3456666666554 3567
Q ss_pred eEEEecCCCcccccccccccccceeeeeecCCCHHHHHHHHHHHhc
Q 011163 410 PIAVTSSDIEFRHFAEFDHESTRFSRFISSTFGNISLSQALEEIKN 455 (492)
Q Consensus 410 vV~~~~~~gg~~e~v~~~~~~~g~~G~~~~~~~~~~l~~ai~~~~~ 455 (492)
+|+... ..-.+.+... ...|..+|+..|.+.+.|.++|.++++
T Consensus 82 ii~~s~--~~~~~~~~~~-~~~g~~~~l~kP~~~~~l~~~i~~~~~ 124 (137)
T 3hdg_A 82 VIVISA--FSEMKYFIKA-IELGVHLFLPKPIEPGRLMETLEDFRH 124 (137)
T ss_dssp EEECCC--CCCHHHHHHH-HHHCCSEECCSSCCHHHHHHHHHHHHH
T ss_pred EEEEec--CcChHHHHHH-HhCCcceeEcCCCCHHHHHHHHHHHHH
Confidence 776543 2222222110 113567899999999999999999864
No 105
>2ph1_A Nucleotide-binding protein; alpha-beta protein, structural genomics, PSI-2, protein STRU initiative; 2.70A {Archaeoglobus fulgidus dsm 4304} PDB: 3kb1_A*
Probab=56.64 E-value=12 Score=33.68 Aligned_cols=39 Identities=15% Similarity=0.163 Sum_probs=28.7
Q ss_pred CCceEEEEeeccccccccCcHH--HHHhHHHHHHHHCCCeEEEEeec
Q 011163 7 NGFHIIHICTEMDPLVSIGSLA--SYVTGLSGALQRKGHLVEVILPK 51 (492)
Q Consensus 7 ~~mkIl~v~~~~~p~~~~GG~~--~~~~~l~~~L~~~Gh~V~vi~~~ 51 (492)
+.|||+.|+. ..||+| +.+.+|+.+|+++|.+|.++=.+
T Consensus 16 ~~~~vI~v~s------~kGGvGKTT~a~nLA~~la~~G~~VlliD~D 56 (262)
T 2ph1_A 16 KIKSRIAVMS------GKGGVGKSTVTALLAVHYARQGKKVGILDAD 56 (262)
T ss_dssp TCSCEEEEEC------SSSCTTHHHHHHHHHHHHHHTTCCEEEEECC
T ss_pred cCCeEEEEEc------CCCCCCHHHHHHHHHHHHHHCCCeEEEEeCC
Confidence 3466766665 237776 46778999999999999888654
No 106
>3n53_A Response regulator receiver modulated diguanylate; diguanylate cyclase, protein structure I II(PSI II), NYSGXRC, structural genomics; 2.20A {Pelobacter carbinolicus} SCOP: c.23.1.0
Probab=56.19 E-value=67 Score=24.76 Aligned_cols=111 Identities=13% Similarity=0.022 Sum_probs=55.9
Q ss_pred cEEEEEecCCChhHHHHHHHHHHHhCCCeEEEEeccCHHHHHHHH--hcCCEEEECCC-CCCCchHHHHHhh-----cCC
Q 011163 337 IQFVFTGTNKLPSASRALVSFQEELKDGIVIFVDSYDDALLHLIF--SGSDIILCHSF-HDPLLQVPLKALK-----YGA 408 (492)
Q Consensus 337 ~~lvivG~g~~~~~~~~l~~~~~~~~~~~v~~~~~~~~~~~~~~~--~~adi~v~pS~-~E~~glv~lEAma-----~G~ 408 (492)
.+++|+.+ ++...+.+++..+.. ..+.. ..+.++....+ ...|++++-.. -+.-|+.+++.+. ..+
T Consensus 4 ~~iLivdd--~~~~~~~l~~~l~~~--~~v~~--~~~~~~a~~~~~~~~~dlvi~D~~l~~~~g~~~~~~l~~~~~~~~~ 77 (140)
T 3n53_A 4 KKILIIDQ--QDFSRIELKNFLDSE--YLVIE--SKNEKEALEQIDHHHPDLVILDMDIIGENSPNLCLKLKRSKGLKNV 77 (140)
T ss_dssp CEEEEECS--CHHHHHHHHHHHTTT--SEEEE--ESSHHHHHHHHHHHCCSEEEEETTC------CHHHHHHTSTTCTTC
T ss_pred CEEEEEeC--CHHHHHHHHHHHHhc--ceEEE--eCCHHHHHHHHhcCCCCEEEEeCCCCCCcHHHHHHHHHcCcccCCC
Confidence 45666663 233444444444332 23332 22332222222 34577776543 3344555555554 567
Q ss_pred ceEEEecCCCcccccccccccccceeeeeecCCCHHHHHHHHHHHhcC
Q 011163 409 APIAVTSSDIEFRHFAEFDHESTRFSRFISSTFGNISLSQALEEIKNN 456 (492)
Q Consensus 409 PvV~~~~~~gg~~e~v~~~~~~~g~~G~~~~~~~~~~l~~ai~~~~~~ 456 (492)
|+|+... ..-.+.+.. ....|..+|+..|.+.+.|.++|..++..
T Consensus 78 ~ii~~s~--~~~~~~~~~-~~~~g~~~~l~KP~~~~~l~~~i~~~~~~ 122 (140)
T 3n53_A 78 PLILLFS--SEHKEAIVN-GLHSGADDYLTKPFNRNDLLSRIEIHLRT 122 (140)
T ss_dssp CEEEEEC--C----CTTT-TTTCCCSEEEESSCCHHHHHHHHHHHHHH
T ss_pred CEEEEec--CCCHHHHHH-HHhcCCCeeeeCCCCHHHHHHHHHHHHhh
Confidence 7777654 222233221 11246678999999999999999998753
No 107
>1qkk_A DCTD, C4-dicarboxylate transport transcriptional regulatory protein; receiver domain, 2-component signal transduction; 1.7A {Sinorhizobium meliloti} SCOP: c.23.1.1 PDB: 1l5z_A 1l5y_A
Probab=56.00 E-value=69 Score=25.28 Aligned_cols=113 Identities=12% Similarity=-0.077 Sum_probs=63.4
Q ss_pred cEEEEEecCCChhHHHHHHHHHHHhCCCeEEEEeccCHHHHHHHHh--cCCEEEECCC-CCCCchHHHHHhh---cCCce
Q 011163 337 IQFVFTGTNKLPSASRALVSFQEELKDGIVIFVDSYDDALLHLIFS--GSDIILCHSF-HDPLLQVPLKALK---YGAAP 410 (492)
Q Consensus 337 ~~lvivG~g~~~~~~~~l~~~~~~~~~~~v~~~~~~~~~~~~~~~~--~adi~v~pS~-~E~~glv~lEAma---~G~Pv 410 (492)
.+++|+.+ ++...+.++......+ -.|.. .-+.++....+. ..|++++-.. .+.-|+-+++.+. ..+|+
T Consensus 4 ~~ILivdd--~~~~~~~l~~~L~~~g-~~v~~--~~~~~~a~~~l~~~~~dliild~~l~~~~g~~~~~~l~~~~~~~pi 78 (155)
T 1qkk_A 4 PSVFLIDD--DRDLRKAMQQTLELAG-FTVSS--FASATEALAGLSADFAGIVISDIRMPGMDGLALFRKILALDPDLPM 78 (155)
T ss_dssp CEEEEECS--CHHHHHHHHHHHHHTT-CEEEE--ESCHHHHHHTCCTTCCSEEEEESCCSSSCHHHHHHHHHHHCTTSCE
T ss_pred CEEEEEeC--CHHHHHHHHHHHHHcC-cEEEE--ECCHHHHHHHHHhCCCCEEEEeCCCCCCCHHHHHHHHHhhCCCCCE
Confidence 46677763 3445556666665542 34432 233333333332 3577776543 3445666666553 46788
Q ss_pred EEEecCCCcccccccccccccceeeeeecCCCHHHHHHHHHHHhcCH
Q 011163 411 IAVTSSDIEFRHFAEFDHESTRFSRFISSTFGNISLSQALEEIKNNP 457 (492)
Q Consensus 411 V~~~~~~gg~~e~v~~~~~~~g~~G~~~~~~~~~~l~~ai~~~~~~~ 457 (492)
|+... ..-.+.+... ...|..+++..|.+.+.|..+|..++...
T Consensus 79 i~ls~--~~~~~~~~~~-~~~g~~~~l~kP~~~~~L~~~i~~~~~~~ 122 (155)
T 1qkk_A 79 ILVTG--HGDIPMAVQA-IQDGAYDFIAKPFAADRLVQSARRAEEKR 122 (155)
T ss_dssp EEEEC--GGGHHHHHHH-HHTTCCEEEESSCCHHHHHHHHHHHHHHH
T ss_pred EEEEC--CCChHHHHHH-HhcCCCeEEeCCCCHHHHHHHHHHHHHHH
Confidence 77543 2222222111 11456789999999999999999887543
No 108
>1sbz_A Probable aromatic acid decarboxylase; FMN binding, PAD1, UBIX, montreal-kingston bacterial structu genomics initiative, BSGI; HET: FMN; 2.00A {Escherichia coli} SCOP: c.34.1.1
Probab=55.97 E-value=11 Score=32.40 Aligned_cols=35 Identities=23% Similarity=0.245 Sum_probs=26.9
Q ss_pred ceEEEEeeccccccccCcH-HHHHhHHHHHHHHC-CCeEEEEeec
Q 011163 9 FHIIHICTEMDPLVSIGSL-ASYVTGLSGALQRK-GHLVEVILPK 51 (492)
Q Consensus 9 mkIl~v~~~~~p~~~~GG~-~~~~~~l~~~L~~~-Gh~V~vi~~~ 51 (492)
|||++-.+ ||+ ..+..+|.+.|.+. |++|.|+...
T Consensus 1 ~~IllgvT--------Gsiaa~k~~~ll~~L~~~~g~~V~vv~T~ 37 (197)
T 1sbz_A 1 MKLIVGMT--------GATGAPLGVALLQALREMPNVETHLVMSK 37 (197)
T ss_dssp CEEEEEEC--------SSSCHHHHHHHHHHHHTCTTCEEEEEECH
T ss_pred CEEEEEEe--------ChHHHHHHHHHHHHHHhccCCEEEEEECc
Confidence 68877664 332 34688999999999 9999999753
No 109
>3heb_A Response regulator receiver domain protein (CHEY); NYSGXRC, PSI-II, respose regulator, structure initiative, structural genomics; 2.40A {Rhodospirillum rubrum} SCOP: c.23.1.0
Probab=55.79 E-value=73 Score=25.03 Aligned_cols=111 Identities=11% Similarity=0.030 Sum_probs=65.9
Q ss_pred CcEEEEEecCCChhHHHHHHHHHHHhCCC-eEEEEeccCHHHHHHHH-----------hcCCEEEECCC-CCCCchHHHH
Q 011163 336 GIQFVFTGTNKLPSASRALVSFQEELKDG-IVIFVDSYDDALLHLIF-----------SGSDIILCHSF-HDPLLQVPLK 402 (492)
Q Consensus 336 ~~~lvivG~g~~~~~~~~l~~~~~~~~~~-~v~~~~~~~~~~~~~~~-----------~~adi~v~pS~-~E~~glv~lE 402 (492)
..+++|+.+ ++...+.+++..+..+.. .|... .+.++....+ ...|++++=.. -+.-|+-+++
T Consensus 4 ~~~ILivdd--d~~~~~~l~~~L~~~g~~~~v~~~--~~~~~al~~l~~~~~~~~~~~~~~dliilD~~l~~~~g~~~~~ 79 (152)
T 3heb_A 4 SVTIVMIED--DLGHARLIEKNIRRAGVNNEIIAF--TDGTSALNYLFGDDKSGRVSAGRAQLVLLDLNLPDMTGIDILK 79 (152)
T ss_dssp -CEEEEECC--CHHHHHHHHHHHHHTTCCCCEEEE--SSHHHHHHHHHCTTSSSGGGTTCBEEEEECSBCSSSBHHHHHH
T ss_pred CceEEEEeC--CHHHHHHHHHHHHhCCCcceEEEe--CCHHHHHHHHhccccccccccCCCCEEEEeCCCCCCcHHHHHH
Confidence 357778774 345566777777665321 44432 3333333444 24677777543 3556777777
Q ss_pred Hhhc-----CCceEEEecCCCcccccccccccccceeeeeecCCCHHHHHHHHHHH
Q 011163 403 ALKY-----GAAPIAVTSSDIEFRHFAEFDHESTRFSRFISSTFGNISLSQALEEI 453 (492)
Q Consensus 403 Ama~-----G~PvV~~~~~~gg~~e~v~~~~~~~g~~G~~~~~~~~~~l~~ai~~~ 453 (492)
.+.. .+|+|+... ..-.+.+... ...|..+|+..|.+.+.|.++|+++
T Consensus 80 ~lr~~~~~~~~pii~~t~--~~~~~~~~~~-~~~g~~~~l~KP~~~~~l~~~i~~~ 132 (152)
T 3heb_A 80 LVKENPHTRRSPVVILTT--TDDQREIQRC-YDLGANVYITKPVNYENFANAIRQL 132 (152)
T ss_dssp HHHHSTTTTTSCEEEEES--CCCHHHHHHH-HHTTCSEEEECCSSHHHHHHHHHHH
T ss_pred HHHhcccccCCCEEEEec--CCCHHHHHHH-HHCCCcEEEeCCCCHHHHHHHHHHH
Confidence 7654 677777654 2222222211 1145678999999999999999887
No 110
>3cg4_A Response regulator receiver domain protein (CHEY-; structural genomics, unknown function; HET: MSE; 1.61A {Methanospirillum hungatei jf-1}
Probab=55.67 E-value=69 Score=24.70 Aligned_cols=111 Identities=11% Similarity=-0.003 Sum_probs=63.7
Q ss_pred CcEEEEEecCCChhHHHHHHHHHHHhCCCeEEEEeccCHHHHHHHHh--cCCEEEECCC-CCCCchHHHHHhhc-----C
Q 011163 336 GIQFVFTGTNKLPSASRALVSFQEELKDGIVIFVDSYDDALLHLIFS--GSDIILCHSF-HDPLLQVPLKALKY-----G 407 (492)
Q Consensus 336 ~~~lvivG~g~~~~~~~~l~~~~~~~~~~~v~~~~~~~~~~~~~~~~--~adi~v~pS~-~E~~glv~lEAma~-----G 407 (492)
..+++|+.+ ++...+.++...+..+ -.|.. ..+.++....+. ..|++++-.. .+.-|+.+++.+.. .
T Consensus 7 ~~~iLivdd--~~~~~~~l~~~L~~~g-~~v~~--~~~~~~a~~~l~~~~~dlii~d~~l~~~~g~~~~~~l~~~~~~~~ 81 (142)
T 3cg4_A 7 KGDVMIVDD--DAHVRIAVKTILSDAG-FHIIS--ADSGGQCIDLLKKGFSGVVLLDIMMPGMDGWDTIRAILDNSLEQG 81 (142)
T ss_dssp CCEEEEECS--CHHHHHHHHHHHHHTT-CEEEE--ESSHHHHHHHHHTCCCEEEEEESCCSSSCHHHHHHHHHHTTCCTT
T ss_pred CCeEEEEcC--CHHHHHHHHHHHHHCC-eEEEE--eCCHHHHHHHHHhcCCCEEEEeCCCCCCCHHHHHHHHHhhcccCC
Confidence 567778773 3445566666666542 34432 223333333333 3577766443 34456777776643 5
Q ss_pred CceEEEecCCCcccccccccccccceeeeeecCCCHHHHHHHHHHHh
Q 011163 408 AAPIAVTSSDIEFRHFAEFDHESTRFSRFISSTFGNISLSQALEEIK 454 (492)
Q Consensus 408 ~PvV~~~~~~gg~~e~v~~~~~~~g~~G~~~~~~~~~~l~~ai~~~~ 454 (492)
+|+|+... ..-.+.... ....|..+++..|.+.+.|.++|..++
T Consensus 82 ~pii~~s~--~~~~~~~~~-~~~~g~~~~l~kp~~~~~l~~~i~~~~ 125 (142)
T 3cg4_A 82 IAIVMLTA--KNAPDAKMI-GLQEYVVDYITKPFDNEDLIEKTTFFM 125 (142)
T ss_dssp EEEEEEEC--TTCCCCSST-TGGGGEEEEEESSCCHHHHHHHHHHHH
T ss_pred CCEEEEEC--CCCHHHHHH-HHhcCccEEEeCCCCHHHHHHHHHHHH
Confidence 67776543 222222211 112466789999999999999998876
No 111
>2ark_A Flavodoxin; FMN, structural genomics, PSI, structure initiative, midwest center for structural genomic electron transport; 2.40A {Aquifex aeolicus} SCOP: c.23.5.8
Probab=55.40 E-value=14 Score=31.35 Aligned_cols=40 Identities=10% Similarity=0.061 Sum_probs=32.3
Q ss_pred CCceEEEEeeccccccccCcHHHHHhHHHHHHHH-CCCeEEEEeec
Q 011163 7 NGFHIIHICTEMDPLVSIGSLASYVTGLSGALQR-KGHLVEVILPK 51 (492)
Q Consensus 7 ~~mkIl~v~~~~~p~~~~GG~~~~~~~l~~~L~~-~Gh~V~vi~~~ 51 (492)
..|||++|... ..|........+++++.+ .|++|.++...
T Consensus 3 ~M~kiliiy~S-----~~GnT~~~a~~i~~~l~~~~g~~v~~~~l~ 43 (188)
T 2ark_A 3 AMGKVLVIYDT-----RTGNTKKMAELVAEGARSLEGTEVRLKHVD 43 (188)
T ss_dssp CCEEEEEEECC-----SSSHHHHHHHHHHHHHHTSTTEEEEEEETT
T ss_pred CCCEEEEEEEC-----CCcHHHHHHHHHHHHHhhcCCCeEEEEEhh
Confidence 34699988752 358899999999999999 99999988654
No 112
>2x4g_A Nucleoside-diphosphate-sugar epimerase; isomerase; 2.65A {Pseudomonas aeruginosa}
Probab=55.23 E-value=10 Score=35.46 Aligned_cols=34 Identities=18% Similarity=0.197 Sum_probs=24.0
Q ss_pred CceEEEEeeccccccccCcHHHHHhHHHHHHHHCCCeEEEEeec
Q 011163 8 GFHIIHICTEMDPLVSIGSLASYVTGLSGALQRKGHLVEVILPK 51 (492)
Q Consensus 8 ~mkIl~v~~~~~p~~~~GG~~~~~~~l~~~L~~~Gh~V~vi~~~ 51 (492)
.|||++.. ..|++| ..+++.|.++||+|.++...
T Consensus 13 ~M~ilVtG-------atG~iG---~~l~~~L~~~g~~V~~~~r~ 46 (342)
T 2x4g_A 13 HVKYAVLG-------ATGLLG---HHAARAIRAAGHDLVLIHRP 46 (342)
T ss_dssp CCEEEEES-------TTSHHH---HHHHHHHHHTTCEEEEEECT
T ss_pred CCEEEEEC-------CCcHHH---HHHHHHHHHCCCEEEEEecC
Confidence 37876533 235555 56678899999999998764
No 113
>2zki_A 199AA long hypothetical Trp repressor binding protein; alpha/beta structure, transcription; 2.90A {Sulfolobus tokodaii}
Probab=54.73 E-value=14 Score=31.59 Aligned_cols=38 Identities=13% Similarity=0.187 Sum_probs=31.7
Q ss_pred CceEEEEeeccccccccCcHHHHHhHHHHHHHHCCCeEEEEeec
Q 011163 8 GFHIIHICTEMDPLVSIGSLASYVTGLSGALQRKGHLVEVILPK 51 (492)
Q Consensus 8 ~mkIl~v~~~~~p~~~~GG~~~~~~~l~~~L~~~Gh~V~vi~~~ 51 (492)
.|||++|... .|-.......+++++.+.|++|.++-..
T Consensus 4 mmkilii~~S------~g~T~~la~~i~~~l~~~g~~v~~~~l~ 41 (199)
T 2zki_A 4 KPNILVLFYG------YGSIVELAKEIGKGAEEAGAEVKIRRVR 41 (199)
T ss_dssp CCEEEEEECC------SSHHHHHHHHHHHHHHHHSCEEEEEECC
T ss_pred CcEEEEEEeC------ccHHHHHHHHHHHHHHhCCCEEEEEehh
Confidence 3899998852 4788999999999999999999988654
No 114
>2afh_E Nitrogenase iron protein 1; nitrogen fixation, iron-sulfur, metal-binding, molybdenum, oxidoreductase; HET: HCA CFN CLF PGE PG4 P6G 1PE; 2.10A {Azotobacter vinelandii} SCOP: c.37.1.10 PDB: 1g1m_A 1g5p_A 1m1y_E* 1m34_E* 1n2c_E* 1nip_A* 1fp6_A* 2afi_E* 2afk_E* 2nip_A 1de0_A 1xcp_A* 1xdb_A 1xd8_A 1xd9_A* 1g20_E* 1g21_E* 2c8v_A* 1rw4_A
Probab=54.35 E-value=12 Score=34.22 Aligned_cols=37 Identities=19% Similarity=0.205 Sum_probs=27.4
Q ss_pred CceEEEEeeccccccccCcHHH--HHhHHHHHHHHCCCeEEEEeec
Q 011163 8 GFHIIHICTEMDPLVSIGSLAS--YVTGLSGALQRKGHLVEVILPK 51 (492)
Q Consensus 8 ~mkIl~v~~~~~p~~~~GG~~~--~~~~l~~~L~~~Gh~V~vi~~~ 51 (492)
.|||+.|+. .||+|+ .+.+|+.+|+++|++|.++=.+
T Consensus 1 ~MkvIavs~-------KGGvGKTT~a~nLA~~La~~G~rVlliD~D 39 (289)
T 2afh_E 1 AMRQCAIYG-------KGGIGKSTTTQNLVAALAEMGKKVMIVGCD 39 (289)
T ss_dssp CCEEEEEEE-------CTTSSHHHHHHHHHHHHHHTTCCEEEEEEC
T ss_pred CceEEEEeC-------CCcCcHHHHHHHHHHHHHHCCCeEEEEecC
Confidence 478777642 266665 5668999999999999888544
No 115
>3lua_A Response regulator receiver protein; two-component signal transduction system, histidine kinase, phosphorelay, receiver domain, nysgxrc; 2.40A {Clostridium thermocellum}
Probab=54.11 E-value=62 Score=24.97 Aligned_cols=115 Identities=10% Similarity=0.051 Sum_probs=65.8
Q ss_pred CcEEEEEecCCChhHHHHHHHHHHHhCCCeEEEEeccCHHHHHHHHhc---CCEEEECCCC--CCCchHHHHHhh-----
Q 011163 336 GIQFVFTGTNKLPSASRALVSFQEELKDGIVIFVDSYDDALLHLIFSG---SDIILCHSFH--DPLLQVPLKALK----- 405 (492)
Q Consensus 336 ~~~lvivG~g~~~~~~~~l~~~~~~~~~~~v~~~~~~~~~~~~~~~~~---adi~v~pS~~--E~~glv~lEAma----- 405 (492)
..+++|+.+ ++...+.++...+....-.|. ...+.++....+.. .|++++-... +.-|+.+++.+.
T Consensus 4 ~~~ilivdd--~~~~~~~l~~~L~~~~~~~v~--~~~~~~~a~~~l~~~~~~dlvi~D~~l~~~~~g~~~~~~l~~~~~~ 79 (140)
T 3lua_A 4 DGTVLLIDY--FEYEREKTKIIFDNIGEYDFI--EVENLKKFYSIFKDLDSITLIIMDIAFPVEKEGLEVLSAIRNNSRT 79 (140)
T ss_dssp CCEEEEECS--CHHHHHHHHHHHHHHCCCEEE--EECSHHHHHTTTTTCCCCSEEEECSCSSSHHHHHHHHHHHHHSGGG
T ss_pred CCeEEEEeC--CHHHHHHHHHHHHhccCccEE--EECCHHHHHHHHhcCCCCcEEEEeCCCCCCCcHHHHHHHHHhCccc
Confidence 356777763 345556666666662123443 22334443344433 6888776543 234566666544
Q ss_pred cCCceEEEecCCCcccccccccccccceeeeeecCCCHHHHHHHHHHHhcCH
Q 011163 406 YGAAPIAVTSSDIEFRHFAEFDHESTRFSRFISSTFGNISLSQALEEIKNNP 457 (492)
Q Consensus 406 ~G~PvV~~~~~~gg~~e~v~~~~~~~g~~G~~~~~~~~~~l~~ai~~~~~~~ 457 (492)
..+|+|+... ..-.+.+... ...|..+|+..|.+.+.|.++|..+++..
T Consensus 80 ~~~~ii~ls~--~~~~~~~~~~-~~~g~~~~l~KP~~~~~l~~~i~~~~~~~ 128 (140)
T 3lua_A 80 ANTPVIIATK--SDNPGYRHAA-LKFKVSDYILKPYPTKRLENSVRSVLKIC 128 (140)
T ss_dssp TTCCEEEEES--CCCHHHHHHH-HHSCCSEEEESSCCTTHHHHHHHHHHCC-
T ss_pred CCCCEEEEeC--CCCHHHHHHH-HHcCCCEEEECCCCHHHHHHHHHHHHHhc
Confidence 3778887654 2222222111 11456789999999999999999987644
No 116
>4f3y_A DHPR, dihydrodipicolinate reductase; structural genomics, niaid, national institute of allergy AN infectious diseases; 2.10A {Burkholderia thailandensis}
Probab=54.09 E-value=9.6 Score=34.82 Aligned_cols=44 Identities=11% Similarity=0.021 Sum_probs=30.9
Q ss_pred HHHHHhcCCEEEECCCCCCCchHHHHHhhcCCceEEEecCCCcccc
Q 011163 377 LHLIFSGSDIILCHSFHDPLLQVPLKALKYGAAPIAVTSSDIEFRH 422 (492)
Q Consensus 377 ~~~~~~~adi~v~pS~~E~~glv~lEAma~G~PvV~~~~~~gg~~e 422 (492)
+.+++..+|+++--+..+..--.+..++..|+|+|+..+ |-..+
T Consensus 67 l~~ll~~~DVVIDfT~p~a~~~~~~~al~~G~~vVigTT--G~s~~ 110 (272)
T 4f3y_A 67 IERVCAEADYLIDFTLPEGTLVHLDAALRHDVKLVIGTT--GFSEP 110 (272)
T ss_dssp HHHHHHHCSEEEECSCHHHHHHHHHHHHHHTCEEEECCC--CCCHH
T ss_pred HHHHhcCCCEEEEcCCHHHHHHHHHHHHHcCCCEEEECC--CCCHH
Confidence 345567899999877644433445678899999999877 64333
No 117
>1kjn_A MTH0777; hypotethical protein, structural genomics, PSI, protein structure initiative; 2.20A {Methanothermobacterthermautotrophicus} SCOP: c.115.1.1
Probab=54.03 E-value=27 Score=28.31 Aligned_cols=41 Identities=15% Similarity=0.023 Sum_probs=28.8
Q ss_pred CCCceEEEEeeccccccccCcHHHHHhHHHHHHHHCCCeEEEEee
Q 011163 6 RNGFHIIHICTEMDPLVSIGSLASYVTGLSGALQRKGHLVEVILP 50 (492)
Q Consensus 6 ~~~mkIl~v~~~~~p~~~~GG~~~~~~~l~~~L~~~Gh~V~vi~~ 50 (492)
+.+||++++-. ++- ..-.-..+.-++..|.++||+|+|...
T Consensus 4 ~~~m~~LilLG-CPE---~Pvq~p~~lYl~~~Lk~~G~~v~VA~n 44 (157)
T 1kjn_A 4 ESTGKALMVLG-CPE---SPVQIPLAIYTSHKLKKKGFRVTVTAN 44 (157)
T ss_dssp --CCEEEEECC-CSC---STTHHHHHHHHHHHHHHTTCEEEEEEC
T ss_pred ccceeeeEEec-CCC---CcchhhHHHHHHHHHHhcCCeeEEecC
Confidence 45799877653 331 234666777899999999999998863
No 118
>3gl9_A Response regulator; beta-sheet, surrounded by alpha helices, BOTH sides, signaling protein; HET: BFD; 1.80A {Thermotoga maritima} SCOP: c.23.1.0 PDB: 3dgf_C 3dge_C
Probab=53.43 E-value=69 Score=24.08 Aligned_cols=110 Identities=12% Similarity=0.012 Sum_probs=63.2
Q ss_pred EEEEEecCCChhHHHHHHHHHHHhCCCeEEEEeccCHHHHHHHHh--cCCEEEECCC-CCCCchHHHHHhh-----cCCc
Q 011163 338 QFVFTGTNKLPSASRALVSFQEELKDGIVIFVDSYDDALLHLIFS--GSDIILCHSF-HDPLLQVPLKALK-----YGAA 409 (492)
Q Consensus 338 ~lvivG~g~~~~~~~~l~~~~~~~~~~~v~~~~~~~~~~~~~~~~--~adi~v~pS~-~E~~glv~lEAma-----~G~P 409 (492)
+++|+.+ ++...+.++...+..+ -.+.. ..+.++.-..+. ..|++++=-. -+.-|+.+++.+. ..+|
T Consensus 4 ~ILivdd--~~~~~~~l~~~l~~~g-~~v~~--~~~~~~al~~l~~~~~dlvllD~~~p~~~g~~~~~~l~~~~~~~~~p 78 (122)
T 3gl9_A 4 KVLLVDD--SAVLRKIVSFNLKKEG-YEVIE--AENGQIALEKLSEFTPDLIVLXIMMPVMDGFTVLKKLQEKEEWKRIP 78 (122)
T ss_dssp EEEEECS--CHHHHHHHHHHHHHTT-CEEEE--ESSHHHHHHHHTTBCCSEEEECSCCSSSCHHHHHHHHHTSTTTTTSC
T ss_pred eEEEEeC--CHHHHHHHHHHHHHCC-cEEEE--eCCHHHHHHHHHhcCCCEEEEeccCCCCcHHHHHHHHHhcccccCCC
Confidence 5666663 2445556666555542 34432 234333334443 3577777543 3456777777763 3577
Q ss_pred eEEEecCCCcccccccccccccceeeeeecCCCHHHHHHHHHHHhc
Q 011163 410 PIAVTSSDIEFRHFAEFDHESTRFSRFISSTFGNISLSQALEEIKN 455 (492)
Q Consensus 410 vV~~~~~~gg~~e~v~~~~~~~g~~G~~~~~~~~~~l~~ai~~~~~ 455 (492)
+|+... .+-.+..... ...|..+|+..|.+++.|..++..+++
T Consensus 79 ii~~s~--~~~~~~~~~~-~~~Ga~~~l~KP~~~~~L~~~i~~~l~ 121 (122)
T 3gl9_A 79 VIVLTA--KGGEEDESLA-LSLGARKVMRKPFSPSQFIEEVKHLLN 121 (122)
T ss_dssp EEEEES--CCSHHHHHHH-HHTTCSEEEESSCCHHHHHHHHHHHHC
T ss_pred EEEEec--CCchHHHHHH-HhcChhhhccCCCCHHHHHHHHHHHhc
Confidence 777553 2222222111 114667899999999999999988764
No 119
>3r6d_A NAD-dependent epimerase/dehydratase; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, veillo parvula; HET: MLZ; 1.25A {Veillonella parvula dsm 2008} PDB: 4hng_A 4hnh_A* 3r14_A*
Probab=53.40 E-value=16 Score=31.66 Aligned_cols=35 Identities=17% Similarity=0.204 Sum_probs=24.1
Q ss_pred CceEEEEeeccccccccCcHHHHHhHHHHHHH-HCCCeEEEEeec
Q 011163 8 GFHIIHICTEMDPLVSIGSLASYVTGLSGALQ-RKGHLVEVILPK 51 (492)
Q Consensus 8 ~mkIl~v~~~~~p~~~~GG~~~~~~~l~~~L~-~~Gh~V~vi~~~ 51 (492)
.||.++|+- ..||+| ..+++.|. +.||+|.++...
T Consensus 4 mmk~vlVtG------asg~iG---~~~~~~l~~~~g~~V~~~~r~ 39 (221)
T 3r6d_A 4 MYXYITILG------AAGQIA---QXLTATLLTYTDMHITLYGRQ 39 (221)
T ss_dssp SCSEEEEES------TTSHHH---HHHHHHHHHHCCCEEEEEESS
T ss_pred eEEEEEEEe------CCcHHH---HHHHHHHHhcCCceEEEEecC
Confidence 477445552 246676 56677888 899999888754
No 120
>1ydg_A Trp repressor binding protein WRBA; tetramer, structural genomics, PSI, protein structure initiative; 2.00A {Deinococcus radiodurans} SCOP: c.23.5.8 PDB: 1yrh_A*
Probab=53.32 E-value=19 Score=31.00 Aligned_cols=40 Identities=10% Similarity=0.076 Sum_probs=32.9
Q ss_pred CCceEEEEeeccccccccCcHHHHHhHHHHHHHHCCCeEEEEeec
Q 011163 7 NGFHIIHICTEMDPLVSIGSLASYVTGLSGALQRKGHLVEVILPK 51 (492)
Q Consensus 7 ~~mkIl~v~~~~~p~~~~GG~~~~~~~l~~~L~~~Gh~V~vi~~~ 51 (492)
+.|||++|.. .| .|-.......+++++.+.|++|.++-..
T Consensus 5 ~mmkilii~~--S~---~g~T~~la~~i~~~l~~~g~~v~~~~l~ 44 (211)
T 1ydg_A 5 APVKLAIVFY--SS---TGTGYAMAQEAAEAGRAAGAEVRLLKVR 44 (211)
T ss_dssp CCCEEEEEEC--CS---SSHHHHHHHHHHHHHHHTTCEEEEEECC
T ss_pred CCCeEEEEEE--CC---CChHHHHHHHHHHHHhcCCCEEEEEecc
Confidence 3489999875 34 4788999999999999999999988754
No 121
>3ilh_A Two component response regulator; NYSGXRC, PSI-II, protein S initiative, structural genomics; 2.59A {Cytophaga hutchinsonii}
Probab=53.23 E-value=76 Score=24.48 Aligned_cols=113 Identities=7% Similarity=-0.104 Sum_probs=64.4
Q ss_pred cEEEEEecCCChhHHHHHHHHHHHhCCC--eEEEEeccCHHHHHHHHh-------cCCEEEECCC-CCCCchHHHHHhhc
Q 011163 337 IQFVFTGTNKLPSASRALVSFQEELKDG--IVIFVDSYDDALLHLIFS-------GSDIILCHSF-HDPLLQVPLKALKY 406 (492)
Q Consensus 337 ~~lvivG~g~~~~~~~~l~~~~~~~~~~--~v~~~~~~~~~~~~~~~~-------~adi~v~pS~-~E~~glv~lEAma~ 406 (492)
.+++|+.+ ++...+.++.+.+..+ . .+.. ..+.++....+. ..|++++=.. -+.-|+.+++.+..
T Consensus 10 ~~iLivdd--~~~~~~~l~~~l~~~~-~~~~v~~--~~~~~~a~~~l~~~~~~~~~~dlvi~D~~l~~~~g~~~~~~l~~ 84 (146)
T 3ilh_A 10 DSVLLIDD--DDIVNFLNTTIIRMTH-RVEEIQS--VTSGNAAINKLNELYAAGRWPSIICIDINMPGINGWELIDLFKQ 84 (146)
T ss_dssp EEEEEECS--CHHHHHHHHHHHHTTC-CEEEEEE--ESSHHHHHHHHHHHHTSSCCCSEEEEESSCSSSCHHHHHHHHHH
T ss_pred ceEEEEeC--CHHHHHHHHHHHHhcC-CCeeeee--cCCHHHHHHHHHHhhccCCCCCEEEEcCCCCCCCHHHHHHHHHH
Confidence 46777763 2344556666665542 2 3322 233333334443 3688877544 35567777766543
Q ss_pred -------CCceEEEecCCCcccccccccccccc-eeeeeecCCCHHHHHHHHHHHhcCH
Q 011163 407 -------GAAPIAVTSSDIEFRHFAEFDHESTR-FSRFISSTFGNISLSQALEEIKNNP 457 (492)
Q Consensus 407 -------G~PvV~~~~~~gg~~e~v~~~~~~~g-~~G~~~~~~~~~~l~~ai~~~~~~~ 457 (492)
.+|+|+... ..-.+.+... ...| ..+|+..|.+.+.|.++|.......
T Consensus 85 ~~~~~~~~~~ii~~t~--~~~~~~~~~~-~~~g~~~~~l~KP~~~~~L~~~i~~~~~~~ 140 (146)
T 3ilh_A 85 HFQPMKNKSIVCLLSS--SLDPRDQAKA-EASDWVDYYVSKPLTANALNNLYNKVLNEG 140 (146)
T ss_dssp HCGGGTTTCEEEEECS--SCCHHHHHHH-HHCSSCCEEECSSCCHHHHHHHHHHHHCC-
T ss_pred hhhhccCCCeEEEEeC--CCChHHHHHH-HhcCCcceeeeCCCCHHHHHHHHHHHHHhc
Confidence 667776543 2222222211 1134 5679999999999999999987654
No 122
>2a5l_A Trp repressor binding protein WRBA; APC5760, PA0949, protein structure initiative, PSI, structural genomics; 1.70A {Pseudomonas aeruginosa} SCOP: c.23.5.8 PDB: 1zwk_A 1zwl_A*
Probab=53.22 E-value=19 Score=30.63 Aligned_cols=38 Identities=13% Similarity=0.117 Sum_probs=31.5
Q ss_pred ceEEEEeeccccccccCcHHHHHhHHHHHHHHCCCeEEEEeec
Q 011163 9 FHIIHICTEMDPLVSIGSLASYVTGLSGALQRKGHLVEVILPK 51 (492)
Q Consensus 9 mkIl~v~~~~~p~~~~GG~~~~~~~l~~~L~~~Gh~V~vi~~~ 51 (492)
|||++|.. .| .|-.......+++++.+.|++|.++...
T Consensus 6 ~kilii~~--S~---~g~T~~la~~i~~~l~~~g~~v~~~~l~ 43 (200)
T 2a5l_A 6 PYILVLYY--SR---HGATAEMARQIARGVEQGGFEARVRTVP 43 (200)
T ss_dssp CEEEEEEC--CS---SSHHHHHHHHHHHHHHHTTCEEEEEBCC
T ss_pred ceEEEEEe--CC---CChHHHHHHHHHHHHhhCCCEEEEEEhh
Confidence 59999885 34 4788999999999999999999988653
No 123
>3dqp_A Oxidoreductase YLBE; alpha-beta protein., structural genomics, PSI-2, protein structure initiative; 1.40A {Lactococcus lactis subsp}
Probab=53.04 E-value=9.5 Score=33.11 Aligned_cols=33 Identities=15% Similarity=0.160 Sum_probs=24.5
Q ss_pred ceEEEEeeccccccccCcHHHHHhHHHHHHHHCCCeEEEEeec
Q 011163 9 FHIIHICTEMDPLVSIGSLASYVTGLSGALQRKGHLVEVILPK 51 (492)
Q Consensus 9 mkIl~v~~~~~p~~~~GG~~~~~~~l~~~L~~~Gh~V~vi~~~ 51 (492)
|||+++.. .|++| ..+++.|.++|++|.++...
T Consensus 1 M~ilItGa-------tG~iG---~~l~~~L~~~g~~V~~~~R~ 33 (219)
T 3dqp_A 1 MKIFIVGS-------TGRVG---KSLLKSLSTTDYQIYAGARK 33 (219)
T ss_dssp CEEEEEST-------TSHHH---HHHHHHHTTSSCEEEEEESS
T ss_pred CeEEEECC-------CCHHH---HHHHHHHHHCCCEEEEEECC
Confidence 78765432 36666 57788899999999998864
No 124
>3hzh_A Chemotaxis response regulator (CHEY-3); phosphatase, complex, response regulator, receiver domain, two-component signal transduction; HET: BFD; 1.96A {Borrelia burgdorferi}
Probab=52.78 E-value=85 Score=24.90 Aligned_cols=69 Identities=12% Similarity=-0.008 Sum_probs=41.9
Q ss_pred CCEEEECCC-CCCCchHHHHHhh---cCCceEEEecCCCcccccccccccccceeeeeecCCCHHHHHHHHHHHhc
Q 011163 384 SDIILCHSF-HDPLLQVPLKALK---YGAAPIAVTSSDIEFRHFAEFDHESTRFSRFISSTFGNISLSQALEEIKN 455 (492)
Q Consensus 384 adi~v~pS~-~E~~glv~lEAma---~G~PvV~~~~~~gg~~e~v~~~~~~~g~~G~~~~~~~~~~l~~ai~~~~~ 455 (492)
.|++++-.. .+.-|+.+++.+. ..+|+|+... ..-.+.+... ...|..+|+..|.+.+.|.++|..+++
T Consensus 84 ~dliilD~~l~~~~g~~~~~~lr~~~~~~~ii~ls~--~~~~~~~~~~-~~~g~~~~l~KP~~~~~l~~~i~~~l~ 156 (157)
T 3hzh_A 84 IDIVTLXITMPKMDGITCLSNIMEFDKNARVIMISA--LGKEQLVKDC-LIKGAKTFIVKPLDRAKVLQRVMSVFV 156 (157)
T ss_dssp CCEEEECSSCSSSCHHHHHHHHHHHCTTCCEEEEES--CCCHHHHHHH-HHTTCSEEEESSCCHHHHHHHHHHTTC
T ss_pred CCEEEEeccCCCccHHHHHHHHHhhCCCCcEEEEec--cCcHHHHHHH-HHcCCCEEEeCCCCHHHHHHHHHHHhc
Confidence 477766543 3445665555543 4677777654 2222222111 114567899999999999999998764
No 125
>3hdv_A Response regulator; PSI-II, structural genomics, Pro structure initiative, NEW YORK SGX research center for STRU genomics, nysgxrc; 2.09A {Pseudomonas putida} SCOP: c.23.1.0
Probab=52.68 E-value=75 Score=24.26 Aligned_cols=114 Identities=7% Similarity=-0.102 Sum_probs=64.9
Q ss_pred CcEEEEEecCCChhHHHHHHHHHHHhCCCeEEEEeccCHHHHHHHH-h-c-CCEEEECCC-CCCCchHHHHHhh----cC
Q 011163 336 GIQFVFTGTNKLPSASRALVSFQEELKDGIVIFVDSYDDALLHLIF-S-G-SDIILCHSF-HDPLLQVPLKALK----YG 407 (492)
Q Consensus 336 ~~~lvivG~g~~~~~~~~l~~~~~~~~~~~v~~~~~~~~~~~~~~~-~-~-adi~v~pS~-~E~~glv~lEAma----~G 407 (492)
..+++|+.+ ++...+.+++..+..+ -.+... .+.++....+ . . .|++++=.. .+.-|+.+++.+. ..
T Consensus 7 ~~~ilivdd--~~~~~~~l~~~L~~~g-~~v~~~--~~~~~a~~~~~~~~~~dlvi~D~~l~~~~g~~~~~~l~~~~~~~ 81 (136)
T 3hdv_A 7 RPLVLVVDD--NAVNREALILYLKSRG-IDAVGA--DGAEEARLYLHYQKRIGLMITDLRMQPESGLDLIRTIRASERAA 81 (136)
T ss_dssp CCEEEEECS--CHHHHHHHHHHHHHTT-CCEEEE--SSHHHHHHHHHHCTTEEEEEECSCCSSSCHHHHHHHHHTSTTTT
T ss_pred CCeEEEECC--CHHHHHHHHHHHHHcC-ceEEEe--CCHHHHHHHHHhCCCCcEEEEeccCCCCCHHHHHHHHHhcCCCC
Confidence 457777773 3455566666666643 344432 2333222222 2 2 577776543 4556777777664 34
Q ss_pred CceEEEecCCCcccccccccccccceeeeeecCCCHHHHHHHHHHHhcCH
Q 011163 408 AAPIAVTSSDIEFRHFAEFDHESTRFSRFISSTFGNISLSQALEEIKNNP 457 (492)
Q Consensus 408 ~PvV~~~~~~gg~~e~v~~~~~~~g~~G~~~~~~~~~~l~~ai~~~~~~~ 457 (492)
+|+|+... ..-.+.+... ...|..+++..|.+.+.|.++|+++....
T Consensus 82 ~~ii~~s~--~~~~~~~~~~-~~~g~~~~l~KP~~~~~l~~~i~~~~~~~ 128 (136)
T 3hdv_A 82 LSIIVVSG--DTDVEEAVDV-MHLGVVDFLLKPVDLGKLLELVNKELKIG 128 (136)
T ss_dssp CEEEEEES--SCCHHHHHHH-HHTTCSEEEESSCCHHHHHHHHHHHHC--
T ss_pred CCEEEEeC--CCChHHHHHH-HhCCcceEEeCCCCHHHHHHHHHHHhcCc
Confidence 67777654 2222222111 11356789999999999999999987643
No 126
>1jx7_A Hypothetical protein YCHN; NEW fold, hexamer, structural genomics, BSGC structure funded by NIH, protein structure initiative, PSI; 2.80A {Escherichia coli} SCOP: c.114.1.1
Probab=52.65 E-value=21 Score=27.25 Aligned_cols=41 Identities=15% Similarity=0.099 Sum_probs=30.0
Q ss_pred ceEEEEeeccccccccCcHHHHHhHHHHHHHHC-CC-eEEEEeecC
Q 011163 9 FHIIHICTEMDPLVSIGSLASYVTGLSGALQRK-GH-LVEVILPKY 52 (492)
Q Consensus 9 mkIl~v~~~~~p~~~~GG~~~~~~~l~~~L~~~-Gh-~V~vi~~~~ 52 (492)
||++++... .|+. .........++.++.+. || +|.|+....
T Consensus 2 ~k~~ii~~~-~p~~--~~~~~~al~~a~~~~~~~g~~~v~vff~~d 44 (117)
T 1jx7_A 2 QKIVIVANG-APYG--SESLFNSLRLAIALREQESNLDLRLFLMSD 44 (117)
T ss_dssp CEEEEEECC-CTTT--CSHHHHHHHHHHHHHHHCTTCEEEEEECGG
T ss_pred cEEEEEEcC-CCCC--cHHHHHHHHHHHHHHhcCCCccEEEEEEch
Confidence 478888764 5542 34455578899999999 99 999988653
No 127
>3bfv_A CAPA1, CAPB2, membrane protein CAPA1, protein tyrosine kinase; chimerical protein, P-loop protein, capsule biogenesis/degradation; HET: ADP; 1.80A {Staphylococcus aureus} PDB: 2ved_A*
Probab=52.39 E-value=15 Score=33.46 Aligned_cols=40 Identities=15% Similarity=0.141 Sum_probs=30.5
Q ss_pred CCCceEEEEeeccccccccCcH--HHHHhHHHHHHHHCCCeEEEEeec
Q 011163 6 RNGFHIIHICTEMDPLVSIGSL--ASYVTGLSGALQRKGHLVEVILPK 51 (492)
Q Consensus 6 ~~~mkIl~v~~~~~p~~~~GG~--~~~~~~l~~~L~~~Gh~V~vi~~~ 51 (492)
+++||++.|+.. .||. .+.+.+||..|++.|.+|.++=.+
T Consensus 79 ~~~~kvI~vts~------kgG~GKTt~a~nLA~~lA~~G~rVLLID~D 120 (271)
T 3bfv_A 79 DSAVQSIVITSE------APGAGKSTIAANLAVAYAQAGYKTLIVDGD 120 (271)
T ss_dssp TCCCCEEEEECS------STTSSHHHHHHHHHHHHHHTTCCEEEEECC
T ss_pred CCCCeEEEEECC------CCCCcHHHHHHHHHHHHHhCCCeEEEEeCC
Confidence 456888888862 2444 467789999999999999998654
No 128
>3kht_A Response regulator; PSI-II, 11023K, structural genomics, Pro structure initiative, NEW YORK SGX research center for STRU genomics, nysgxrc; 2.10A {Hahella chejuensis} SCOP: c.23.1.0
Probab=51.95 E-value=81 Score=24.41 Aligned_cols=113 Identities=8% Similarity=-0.097 Sum_probs=65.7
Q ss_pred CcEEEEEecCCChhHHHHHHHHHHHhCCCeEEEEeccCHHHHHHHHh--cCCEEEECCC-CCCCchHHHHHhhc-----C
Q 011163 336 GIQFVFTGTNKLPSASRALVSFQEELKDGIVIFVDSYDDALLHLIFS--GSDIILCHSF-HDPLLQVPLKALKY-----G 407 (492)
Q Consensus 336 ~~~lvivG~g~~~~~~~~l~~~~~~~~~~~v~~~~~~~~~~~~~~~~--~adi~v~pS~-~E~~glv~lEAma~-----G 407 (492)
..+++|+.+ ++...+.++...+..+ .........+.++....+. ..|++++=.. -+.-|+-+++.+.. .
T Consensus 5 ~~~ILivdd--~~~~~~~l~~~L~~~~-~~~~v~~~~~~~~a~~~l~~~~~dlii~D~~l~~~~g~~~~~~lr~~~~~~~ 81 (144)
T 3kht_A 5 SKRVLVVED--NPDDIALIRRVLDRKD-IHCQLEFVDNGAKALYQVQQAKYDLIILDIGLPIANGFEVMSAVRKPGANQH 81 (144)
T ss_dssp CEEEEEECC--CHHHHHHHHHHHHHTT-CCEEEEEESSHHHHHHHHTTCCCSEEEECTTCGGGCHHHHHHHHHSSSTTTT
T ss_pred CCEEEEEeC--CHHHHHHHHHHHHhcC-CCeeEEEECCHHHHHHHhhcCCCCEEEEeCCCCCCCHHHHHHHHHhcccccC
Confidence 457777773 3455566776666653 2322222233333334443 3577777544 34456777776653 6
Q ss_pred CceEEEecCCCcccccccccccccceeeeeecCC-CHHHHHHHHHHHh
Q 011163 408 AAPIAVTSSDIEFRHFAEFDHESTRFSRFISSTF-GNISLSQALEEIK 454 (492)
Q Consensus 408 ~PvV~~~~~~gg~~e~v~~~~~~~g~~G~~~~~~-~~~~l~~ai~~~~ 454 (492)
+|+|+... ..-.+.+... ...|..+|+..|. +.+.|.++|..++
T Consensus 82 ~pii~~s~--~~~~~~~~~~-~~~ga~~~l~Kp~~~~~~l~~~i~~~l 126 (144)
T 3kht_A 82 TPIVILTD--NVSDDRAKQC-MAAGASSVVDKSSNNVTDFYGRIYAIF 126 (144)
T ss_dssp CCEEEEET--TCCHHHHHHH-HHTTCSEEEECCTTSHHHHHHHHHHHH
T ss_pred CCEEEEeC--CCCHHHHHHH-HHcCCCEEEECCCCcHHHHHHHHHHHH
Confidence 78887654 2222322111 1146678999999 9999999999886
No 129
>2j48_A Two-component sensor kinase; pseudo-receiver, circadian clock, transferase, response regulator, histidine protein kinase; NMR {Synechococcus elongatus}
Probab=51.83 E-value=67 Score=23.45 Aligned_cols=106 Identities=12% Similarity=0.030 Sum_probs=59.7
Q ss_pred EEEEEecCCChhHHHHHHHHHHHhCCCeEEEEeccCHHHHHHHH--hcCCEEEECCC-CCCCchHHHHHhh-----cCCc
Q 011163 338 QFVFTGTNKLPSASRALVSFQEELKDGIVIFVDSYDDALLHLIF--SGSDIILCHSF-HDPLLQVPLKALK-----YGAA 409 (492)
Q Consensus 338 ~lvivG~g~~~~~~~~l~~~~~~~~~~~v~~~~~~~~~~~~~~~--~~adi~v~pS~-~E~~glv~lEAma-----~G~P 409 (492)
+++++.+ ++...+.++...+..+ -++... .+.++....+ ...|++++-.. .+.-|+..++.+. ..+|
T Consensus 3 ~iliv~~--~~~~~~~l~~~l~~~g-~~v~~~--~~~~~~~~~l~~~~~dlii~d~~~~~~~~~~~~~~l~~~~~~~~~~ 77 (119)
T 2j48_A 3 HILLLEE--EDEAATVVCEMLTAAG-FKVIWL--VDGSTALDQLDLLQPIVILMAWPPPDQSCLLLLQHLREHQADPHPP 77 (119)
T ss_dssp EEEEECC--CHHHHHHHHHHHHHTT-CEEEEE--SCHHHHHHHHHHHCCSEEEEECSTTCCTHHHHHHHHHHTCCCSSCC
T ss_pred EEEEEeC--CHHHHHHHHHHHHhCC-cEEEEe--cCHHHHHHHHHhcCCCEEEEecCCCCCCHHHHHHHHHhccccCCCC
Confidence 5666663 2445556666555542 344432 2333222222 24687776543 3445666777664 4678
Q ss_pred eEEEecCCCcccc-cccccccccceeeeeecCCCHHHHHHHHHHHhc
Q 011163 410 PIAVTSSDIEFRH-FAEFDHESTRFSRFISSTFGNISLSQALEEIKN 455 (492)
Q Consensus 410 vV~~~~~~gg~~e-~v~~~~~~~g~~G~~~~~~~~~~l~~ai~~~~~ 455 (492)
+|+... ..-.+ ... .|..+++..|.+.+.|.+++..++.
T Consensus 78 ii~~~~--~~~~~~~~~-----~g~~~~l~kp~~~~~l~~~l~~~~~ 117 (119)
T 2j48_A 78 LVLFLG--EPPVDPLLT-----AQASAILSKPLDPQLLLTTLQGLCP 117 (119)
T ss_dssp CEEEES--SCCSSHHHH-----HHCSEECSSCSTTHHHHHHHHTTCC
T ss_pred EEEEeC--CCCchhhhh-----cCHHHhccCCCCHHHHHHHHHHHhc
Confidence 877654 22222 111 3556789899999999998887653
No 130
>1dbw_A Transcriptional regulatory protein FIXJ; doubly wound five-stranded beta/alpha fold, nitrogen fixatio regulation; HET: 15P; 1.60A {Sinorhizobium meliloti} SCOP: c.23.1.1 PDB: 1dck_A* 1dcm_A 1d5w_A*
Probab=51.70 E-value=74 Score=23.92 Aligned_cols=112 Identities=12% Similarity=0.039 Sum_probs=62.8
Q ss_pred CcEEEEEecCCChhHHHHHHHHHHHhCCCeEEEEeccCHHHHHHHHh--cCCEEEECCC-CCCCchHHHHHhh---cCCc
Q 011163 336 GIQFVFTGTNKLPSASRALVSFQEELKDGIVIFVDSYDDALLHLIFS--GSDIILCHSF-HDPLLQVPLKALK---YGAA 409 (492)
Q Consensus 336 ~~~lvivG~g~~~~~~~~l~~~~~~~~~~~v~~~~~~~~~~~~~~~~--~adi~v~pS~-~E~~glv~lEAma---~G~P 409 (492)
+.+++++.+. +...+.++...+..+ -.+.. ..+.++....+. ..|++++=-. ...-|+-+++.+. ..+|
T Consensus 3 ~~~ilivdd~--~~~~~~l~~~l~~~~-~~v~~--~~~~~~~~~~~~~~~~dlvi~D~~l~~~~g~~~~~~l~~~~~~~~ 77 (126)
T 1dbw_A 3 DYTVHIVDDE--EPVRKSLAFMLTMNG-FAVKM--HQSAEAFLAFAPDVRNGVLVTDLRMPDMSGVELLRNLGDLKINIP 77 (126)
T ss_dssp CCEEEEEESS--HHHHHHHHHHHHHTT-CEEEE--ESCHHHHHHHGGGCCSEEEEEECCSTTSCHHHHHHHHHHTTCCCC
T ss_pred CCEEEEEcCC--HHHHHHHHHHHHhCC-cEEEE--eCCHHHHHHHHhcCCCCEEEEECCCCCCCHHHHHHHHHhcCCCCC
Confidence 3567777743 445556666655542 34432 233333334443 3577766433 2345666666653 4677
Q ss_pred eEEEecCCCcccccccccccccceeeeeecCCCHHHHHHHHHHHhc
Q 011163 410 PIAVTSSDIEFRHFAEFDHESTRFSRFISSTFGNISLSQALEEIKN 455 (492)
Q Consensus 410 vV~~~~~~gg~~e~v~~~~~~~g~~G~~~~~~~~~~l~~ai~~~~~ 455 (492)
+|+... ..-.+..... ...|..||+..|.+.+.|.++++.++.
T Consensus 78 ii~~s~--~~~~~~~~~~-~~~ga~~~l~Kp~~~~~l~~~i~~~~~ 120 (126)
T 1dbw_A 78 SIVITG--HGDVPMAVEA-MKAGAVDFIEKPFEDTVIIEAIERASE 120 (126)
T ss_dssp EEEEEC--TTCHHHHHHH-HHTTCSEEEESSCCHHHHHHHHHHHHT
T ss_pred EEEEEC--CCCHHHHHHH-HHhCHHHheeCCCCHHHHHHHHHHHHH
Confidence 777543 2222222111 114667899999999999999988764
No 131
>2l2q_A PTS system, cellobiose-specific IIB component (CE; cellobiose-specific phosphotransferase IIB component, struct genomics; NMR {Borrelia burgdorferi}
Probab=51.58 E-value=21 Score=27.31 Aligned_cols=41 Identities=10% Similarity=0.148 Sum_probs=29.3
Q ss_pred CCceEEEEeeccccccccCcHHHHHhHHHHHHHHCCCeEEEEeecCC
Q 011163 7 NGFHIIHICTEMDPLVSIGSLASYVTGLSGALQRKGHLVEVILPKYA 53 (492)
Q Consensus 7 ~~mkIl~v~~~~~p~~~~GG~~~~~~~l~~~L~~~Gh~V~vi~~~~~ 53 (492)
+.|||+++|.. ..|-. ..+..+-+.+.++|+++.+-+....
T Consensus 3 ~~mkIlvvC~~-----G~~TS-ll~~kl~~~~~~~gi~~~i~~~~~~ 43 (109)
T 2l2q_A 3 GSMNILLVCGA-----GMSTS-MLVQRIEKYAKSKNINATIEAIAET 43 (109)
T ss_dssp CCEEEEEESSS-----SCSSC-HHHHHHHHHHHHHTCSEEEEEECST
T ss_pred CceEEEEECCC-----hHhHH-HHHHHHHHHHHHCCCCeEEEEecHH
Confidence 34999999973 22333 6777888889999998887665443
No 132
>3tem_A Ribosyldihydronicotinamide dehydrogenase [quinone; oxidoreductase-oxidoreductase inhibitor complex; HET: FAD 6A1 IMD; 1.45A {Homo sapiens} SCOP: c.23.5.3 PDB: 3te7_A* 3tzb_A* 3fw1_A* 2qwx_A* 1zx1_A* 3g5m_A* 3gam_A* 3ovm_A* 3owh_A* 3owx_A* 3ox1_A* 3ox2_A* 3ox3_A* 1sg0_A* 1qr2_A* 1xi2_A* 2qmy_A* 2qmz_A* 2qr2_A* 2qx4_A* ...
Probab=51.38 E-value=18 Score=31.96 Aligned_cols=40 Identities=20% Similarity=0.091 Sum_probs=30.2
Q ss_pred CceEEEEeeccccccccCc-HHHHHhHHHHHHHHCCCeEEEEeec
Q 011163 8 GFHIIHICTEMDPLVSIGS-LASYVTGLSGALQRKGHLVEVILPK 51 (492)
Q Consensus 8 ~mkIl~v~~~~~p~~~~GG-~~~~~~~l~~~L~~~Gh~V~vi~~~ 51 (492)
.||||+|.. +|. .+| .........+++.+.||+|.++-..
T Consensus 1 ~mkiLiI~g--spr--~~S~t~~l~~~~~~~l~~~g~ev~~~dL~ 41 (228)
T 3tem_A 1 GKKVLIVYA--HQE--PKSFNGSLKNVAVDELSRQGCTVTVSDLY 41 (228)
T ss_dssp CCEEEEEEC--CSC--TTSHHHHHHHHHHHHHHHHTCEEEEEETT
T ss_pred CCEEEEEEe--CCC--CCCHHHHHHHHHHHHHHHCCCEEEEEEhh
Confidence 489999997 453 244 5666677788888889999999764
No 133
>3hv2_A Response regulator/HD domain protein; PSI-2, NYSGXRC, structural genomics, protein structure initiative; 1.50A {Pseudomonas fluorescens pf-5}
Probab=51.28 E-value=87 Score=24.61 Aligned_cols=69 Identities=13% Similarity=0.099 Sum_probs=41.5
Q ss_pred CCEEEECCC-CCCCchHHHHHhh---cCCceEEEecCCCcccccccccccccc-eeeeeecCCCHHHHHHHHHHHhc
Q 011163 384 SDIILCHSF-HDPLLQVPLKALK---YGAAPIAVTSSDIEFRHFAEFDHESTR-FSRFISSTFGNISLSQALEEIKN 455 (492)
Q Consensus 384 adi~v~pS~-~E~~glv~lEAma---~G~PvV~~~~~~gg~~e~v~~~~~~~g-~~G~~~~~~~~~~l~~ai~~~~~ 455 (492)
.|++++-.. -+.-|+.+++.+. ..+|+|+... ..-.+.+... ...| ..+|+..|.+.+.|..+|..+++
T Consensus 59 ~dlvi~D~~l~~~~g~~~~~~l~~~~~~~~ii~~s~--~~~~~~~~~~-~~~g~~~~~l~KP~~~~~l~~~i~~~l~ 132 (153)
T 3hv2_A 59 VDLVISAAHLPQMDGPTLLARIHQQYPSTTRILLTG--DPDLKLIAKA-INEGEIYRYLSKPWDDQELLLALRQALE 132 (153)
T ss_dssp CSEEEEESCCSSSCHHHHHHHHHHHCTTSEEEEECC--CCCHHHHHHH-HHTTCCSEEECSSCCHHHHHHHHHHHHH
T ss_pred CCEEEEeCCCCcCcHHHHHHHHHhHCCCCeEEEEEC--CCCHHHHHHH-HhCCCcceEEeCCCCHHHHHHHHHHHHH
Confidence 566666443 3445666665543 4677777543 2222222111 1134 56799999999999999998864
No 134
>3m6m_D Sensory/regulatory protein RPFC; RPFF, REC, enoyl-COA hydratase, lyase-transferase COMP; 2.50A {Xanthomonas campestris PV}
Probab=51.28 E-value=85 Score=24.45 Aligned_cols=112 Identities=11% Similarity=0.051 Sum_probs=61.6
Q ss_pred CcEEEEEecCCChhHHHHHHHHHHHhCCCeEEEEeccCHHHHHHHH--hcCCEEEECCC-CCCCchHHHHHhh-------
Q 011163 336 GIQFVFTGTNKLPSASRALVSFQEELKDGIVIFVDSYDDALLHLIF--SGSDIILCHSF-HDPLLQVPLKALK------- 405 (492)
Q Consensus 336 ~~~lvivG~g~~~~~~~~l~~~~~~~~~~~v~~~~~~~~~~~~~~~--~~adi~v~pS~-~E~~glv~lEAma------- 405 (492)
..+++|+.+. +...+.++.+.+..+ ..+... .+.++....+ ...|++++=-. -+.-|+-+++.+.
T Consensus 14 ~~~iLivdd~--~~~~~~l~~~L~~~g-~~v~~~--~~~~~al~~~~~~~~dlvl~D~~mp~~~g~~~~~~lr~~~~~~~ 88 (143)
T 3m6m_D 14 SMRMLVADDH--EANRMVLQRLLEKAG-HKVLCV--NGAEQVLDAMAEEDYDAVIVDLHMPGMNGLDMLKQLRVMQASGM 88 (143)
T ss_dssp -CEEEEECSS--HHHHHHHHHHHHC---CEEEEE--SSHHHHHHHHHHSCCSEEEEESCCSSSCHHHHHHHHHHHHHTTC
T ss_pred cceEEEEeCC--HHHHHHHHHHHHHcC-CeEEEe--CCHHHHHHHHhcCCCCEEEEeCCCCCCCHHHHHHHHHhchhccC
Confidence 4677777643 344555555555432 334322 2333322333 24687777433 3455777777664
Q ss_pred cCCceEEEecCCCcccccccccccccceeeeeecCCCHHHHHHHHHHHhc
Q 011163 406 YGAAPIAVTSSDIEFRHFAEFDHESTRFSRFISSTFGNISLSQALEEIKN 455 (492)
Q Consensus 406 ~G~PvV~~~~~~gg~~e~v~~~~~~~g~~G~~~~~~~~~~l~~ai~~~~~ 455 (492)
..+|+|+... ..-.+.+... ...|..+|+..|.+.+.|.++|..+..
T Consensus 89 ~~~pii~~s~--~~~~~~~~~~-~~~Ga~~~l~KP~~~~~L~~~l~~~~~ 135 (143)
T 3m6m_D 89 RYTPVVVLSA--DVTPEAIRAC-EQAGARAFLAKPVVAAKLLDTLADLAV 135 (143)
T ss_dssp CCCCEEEEES--CCCHHHHHHH-HHTTCSEEEESSCCHHHHHHHHHHHC-
T ss_pred CCCeEEEEeC--CCCHHHHHHH-HHcChhheeeCCCCHHHHHHHHHHHHH
Confidence 2367777654 3333332211 113667899999999999999998864
No 135
>3fni_A Putative diflavin flavoprotein A 3; alpha-beta protein, structural genomics, PSI-2, protein STRU initiative, northeast structural genomics consortium; 2.30A {Nostoc SP} PDB: 2klb_A
Probab=51.15 E-value=29 Score=28.53 Aligned_cols=38 Identities=13% Similarity=0.100 Sum_probs=31.3
Q ss_pred ceEEEEeeccccccccCcHHHHHhHHHHHHHHCCCeEEEEeec
Q 011163 9 FHIIHICTEMDPLVSIGSLASYVTGLSGALQRKGHLVEVILPK 51 (492)
Q Consensus 9 mkIl~v~~~~~p~~~~GG~~~~~~~l~~~L~~~Gh~V~vi~~~ 51 (492)
.||+++.. . .+|.++.+...++++|.+.|++|.++-..
T Consensus 5 ~kv~IvY~--S---~~GnT~~iA~~ia~~l~~~g~~v~~~~~~ 42 (159)
T 3fni_A 5 TSIGVFYV--S---EYGYSDRLAQAIINGITKTGVGVDVVDLG 42 (159)
T ss_dssp CEEEEEEC--T---TSTTHHHHHHHHHHHHHHTTCEEEEEESS
T ss_pred CEEEEEEE--C---CChHHHHHHHHHHHHHHHCCCeEEEEECc
Confidence 47777764 2 36999999999999999999999888654
No 136
>1lss_A TRK system potassium uptake protein TRKA homolog; KTN domain, NAD, RCK domain, potassium transport, potassium channel, KTRA; HET: NAD; 2.30A {Methanocaldococcus jannaschii} SCOP: c.2.1.9
Probab=51.11 E-value=17 Score=28.49 Aligned_cols=32 Identities=31% Similarity=0.376 Sum_probs=22.9
Q ss_pred CceEEEEeeccccccccCcHHHHHhHHHHHHHHCCCeEEEEee
Q 011163 8 GFHIIHICTEMDPLVSIGSLASYVTGLSGALQRKGHLVEVILP 50 (492)
Q Consensus 8 ~mkIl~v~~~~~p~~~~GG~~~~~~~l~~~L~~~Gh~V~vi~~ 50 (492)
.|||+++.. |.++ ..+++.|.+.|++|.++..
T Consensus 4 ~m~i~IiG~--------G~iG---~~~a~~L~~~g~~v~~~d~ 35 (140)
T 1lss_A 4 GMYIIIAGI--------GRVG---YTLAKSLSEKGHDIVLIDI 35 (140)
T ss_dssp -CEEEEECC--------SHHH---HHHHHHHHHTTCEEEEEES
T ss_pred CCEEEEECC--------CHHH---HHHHHHHHhCCCeEEEEEC
Confidence 488877532 4444 4678889999999998865
No 137
>3nhm_A Response regulator; protein structure initiative II(PSI II), NYSGXRC, structural genomics; 2.19A {Myxococcus xanthus}
Probab=50.73 E-value=79 Score=23.95 Aligned_cols=110 Identities=8% Similarity=-0.080 Sum_probs=61.1
Q ss_pred cEEEEEecCCChhHHHHHHHHHHHhCCCeEEEEeccCHHHHHHHH--hcCCEEEECCC-CCCCchHHHHHhhc-----CC
Q 011163 337 IQFVFTGTNKLPSASRALVSFQEELKDGIVIFVDSYDDALLHLIF--SGSDIILCHSF-HDPLLQVPLKALKY-----GA 408 (492)
Q Consensus 337 ~~lvivG~g~~~~~~~~l~~~~~~~~~~~v~~~~~~~~~~~~~~~--~~adi~v~pS~-~E~~glv~lEAma~-----G~ 408 (492)
.+++|+.+ ++...+.++...+ . .-.+.. ..+.++....+ ...|++++=.. -+.-|+.+++.+.. .+
T Consensus 5 ~~ilivdd--~~~~~~~l~~~l~-~-~~~v~~--~~~~~~a~~~l~~~~~dlvi~d~~l~~~~g~~~~~~l~~~~~~~~~ 78 (133)
T 3nhm_A 5 PKVLIVEN--SWTMRETLRLLLS-G-EFDCTT--AADGASGLQQALAHPPDVLISDVNMDGMDGYALCGHFRSEPTLKHI 78 (133)
T ss_dssp CEEEEECS--CHHHHHHHHHHHT-T-TSEEEE--ESSHHHHHHHHHHSCCSEEEECSSCSSSCHHHHHHHHHHSTTTTTC
T ss_pred CEEEEEcC--CHHHHHHHHHHHh-C-CcEEEE--ECCHHHHHHHHhcCCCCEEEEeCCCCCCCHHHHHHHHHhCCccCCC
Confidence 46777763 2344445554444 2 234432 22333322333 34678777543 35567777766553 67
Q ss_pred ceEEEecCCCcccccccccccccceeeeeecCCCHHHHHHHHHHHhcC
Q 011163 409 APIAVTSSDIEFRHFAEFDHESTRFSRFISSTFGNISLSQALEEIKNN 456 (492)
Q Consensus 409 PvV~~~~~~gg~~e~v~~~~~~~g~~G~~~~~~~~~~l~~ai~~~~~~ 456 (492)
|+|+... -.-.+... ....|..+|+..|.+++.|.++|..+++.
T Consensus 79 pii~~s~--~~~~~~~~--~~~~g~~~~l~KP~~~~~l~~~i~~~l~~ 122 (133)
T 3nhm_A 79 PVIFVSG--YAPRTEGP--ADQPVPDAYLVKPVKPPVLIAQLHALLAR 122 (133)
T ss_dssp CEEEEES--CCC-------TTSCCCSEEEESSCCHHHHHHHHHHHHHH
T ss_pred CEEEEeC--CCcHhHHH--HhhcCCceEEeccCCHHHHHHHHHHHHhh
Confidence 7777653 22222211 12246678999999999999999998753
No 138
>1hdo_A Biliverdin IX beta reductase; foetal metabolism, HAEM degradation, flavin reductase, diaphorase, green HAEM binding protein; HET: NAP; 1.15A {Homo sapiens} SCOP: c.2.1.2 PDB: 1he2_A* 1he3_A* 1he4_A* 1he5_A*
Probab=50.73 E-value=17 Score=30.87 Aligned_cols=33 Identities=15% Similarity=0.090 Sum_probs=23.8
Q ss_pred ceEEEEeeccccccccCcHHHHHhHHHHHHHHCCCeEEEEeec
Q 011163 9 FHIIHICTEMDPLVSIGSLASYVTGLSGALQRKGHLVEVILPK 51 (492)
Q Consensus 9 mkIl~v~~~~~p~~~~GG~~~~~~~l~~~L~~~Gh~V~vi~~~ 51 (492)
|+|+++.. +|++| ..+++.|.++|++|.++...
T Consensus 4 ~~ilVtGa-------tG~iG---~~l~~~l~~~g~~V~~~~r~ 36 (206)
T 1hdo_A 4 KKIAIFGA-------TGQTG---LTTLAQAVQAGYEVTVLVRD 36 (206)
T ss_dssp CEEEEEST-------TSHHH---HHHHHHHHHTTCEEEEEESC
T ss_pred CEEEEEcC-------CcHHH---HHHHHHHHHCCCeEEEEEeC
Confidence 77765332 35555 56778899999999988754
No 139
>3e8x_A Putative NAD-dependent epimerase/dehydratase; structural genomics, APC7755, NADP, P protein structure initiative; HET: MSE NAP; 2.10A {Bacillus halodurans}
Probab=50.52 E-value=15 Score=32.26 Aligned_cols=35 Identities=23% Similarity=0.394 Sum_probs=24.6
Q ss_pred CCceEEEEeeccccccccCcHHHHHhHHHHHHHHCCCeEEEEeec
Q 011163 7 NGFHIIHICTEMDPLVSIGSLASYVTGLSGALQRKGHLVEVILPK 51 (492)
Q Consensus 7 ~~mkIl~v~~~~~p~~~~GG~~~~~~~l~~~L~~~Gh~V~vi~~~ 51 (492)
+.|+|+++. .+||+| ..+++.|.++||+|.++...
T Consensus 20 ~~~~ilVtG-------atG~iG---~~l~~~L~~~G~~V~~~~R~ 54 (236)
T 3e8x_A 20 QGMRVLVVG-------ANGKVA---RYLLSELKNKGHEPVAMVRN 54 (236)
T ss_dssp -CCEEEEET-------TTSHHH---HHHHHHHHHTTCEEEEEESS
T ss_pred CCCeEEEEC-------CCChHH---HHHHHHHHhCCCeEEEEECC
Confidence 347776533 246666 46778899999999998764
No 140
>1k68_A Phytochrome response regulator RCPA; phosphorylated aspartate, CHEY homologue, homodimer, (beta/alpha)5, signaling protein; HET: PHD; 1.90A {Tolypothrix SP} SCOP: c.23.1.1
Probab=50.40 E-value=81 Score=23.98 Aligned_cols=111 Identities=11% Similarity=-0.014 Sum_probs=64.7
Q ss_pred cEEEEEecCCChhHHHHHHHHHHHhCCC-eEEEEeccCHHHHHHHHh---------cCCEEEECCC-CCCCchHHHHHhh
Q 011163 337 IQFVFTGTNKLPSASRALVSFQEELKDG-IVIFVDSYDDALLHLIFS---------GSDIILCHSF-HDPLLQVPLKALK 405 (492)
Q Consensus 337 ~~lvivG~g~~~~~~~~l~~~~~~~~~~-~v~~~~~~~~~~~~~~~~---------~adi~v~pS~-~E~~glv~lEAma 405 (492)
.+++|+.+ ++...+.++...+..+.. .+.. .-+.++....+. ..|++++=.. .+.-|+-+++.+.
T Consensus 3 ~~ilivdd--~~~~~~~l~~~L~~~~~~~~v~~--~~~~~~a~~~l~~~~~~~~~~~~dlvi~d~~~~~~~g~~~~~~l~ 78 (140)
T 1k68_A 3 KKIFLVED--NKADIRLIQEALANSTVPHEVVT--VRDGMEAMAYLRQEGEYANASRPDLILLXLNLPKKDGREVLAEIK 78 (140)
T ss_dssp CEEEEECC--CHHHHHHHHHHHHTCSSCCEEEE--ECSHHHHHHHHTTCGGGGSCCCCSEEEECSSCSSSCHHHHHHHHH
T ss_pred CeEEEEeC--CHHHHHHHHHHHHhcCCCceEEE--ECCHHHHHHHHHcccccccCCCCcEEEEecCCCcccHHHHHHHHH
Confidence 46777763 345556666666654311 3443 233333334444 4788887644 3445666666654
Q ss_pred -----cCCceEEEecCCCcccccccccccccceeeeeecCCCHHHHHHHHHHHh
Q 011163 406 -----YGAAPIAVTSSDIEFRHFAEFDHESTRFSRFISSTFGNISLSQALEEIK 454 (492)
Q Consensus 406 -----~G~PvV~~~~~~gg~~e~v~~~~~~~g~~G~~~~~~~~~~l~~ai~~~~ 454 (492)
..+|+|+... ..-.+.+... ...|..+++..|.+.+.|.++|..++
T Consensus 79 ~~~~~~~~pii~ls~--~~~~~~~~~~-~~~g~~~~l~kP~~~~~l~~~i~~~~ 129 (140)
T 1k68_A 79 SDPTLKRIPVVVLST--SINEDDIFHS-YDLHVNCYITKSANLSQLFQIVKGIE 129 (140)
T ss_dssp HSTTGGGSCEEEEES--CCCHHHHHHH-HHTTCSEEEECCSSHHHHHHHHHHHH
T ss_pred cCcccccccEEEEec--CCcHHHHHHH-HHhchhheecCCCCHHHHHHHHHHHH
Confidence 4677777654 2222322211 11456789999999999999998875
No 141
>3mc3_A DSRE/DSRF-like family protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MLY MSE; 1.49A {Sulfolobus solfataricus}
Probab=50.28 E-value=31 Score=27.41 Aligned_cols=44 Identities=9% Similarity=-0.069 Sum_probs=31.7
Q ss_pred CCceEEEEeeccccccccCcHHHHHhHHHHHHHHCCCeEEEEeecCC
Q 011163 7 NGFHIIHICTEMDPLVSIGSLASYVTGLSGALQRKGHLVEVILPKYA 53 (492)
Q Consensus 7 ~~mkIl~v~~~~~p~~~~GG~~~~~~~l~~~L~~~Gh~V~vi~~~~~ 53 (492)
..+|+++|... .|+. ..-......++.+..+.||+|.|+....+
T Consensus 14 ~~~kl~ii~~s-gP~~--~~~~~~al~lA~~A~a~g~eV~vFf~~dG 57 (134)
T 3mc3_A 14 QXXXILIVVTH-GPED--LDRTYAPLFMASISASMEYETSVFFMIXG 57 (134)
T ss_dssp CCCEEEEEECC-CGGG--THHHHHHHHHHHHHHHTTCEEEEEECTTG
T ss_pred ccceEEEEEcc-CCCC--HHHHHHHHHHHHHHHHCCCCEEEEEEeCc
Confidence 45788888874 4542 34555677788888999999999886543
No 142
>1cp2_A CP2, nitrogenase iron protein; oxidoreductase; 1.93A {Clostridium pasteurianum} SCOP: c.37.1.10
Probab=50.17 E-value=14 Score=33.34 Aligned_cols=36 Identities=17% Similarity=0.260 Sum_probs=26.8
Q ss_pred ceEEEEeeccccccccCcHHH--HHhHHHHHHHHCCCeEEEEeec
Q 011163 9 FHIIHICTEMDPLVSIGSLAS--YVTGLSGALQRKGHLVEVILPK 51 (492)
Q Consensus 9 mkIl~v~~~~~p~~~~GG~~~--~~~~l~~~L~~~Gh~V~vi~~~ 51 (492)
|||+.|+. .||+|+ .+.+|+.+|+++|++|.++=.+
T Consensus 1 M~vI~vs~-------KGGvGKTT~a~nLA~~la~~G~~VlliD~D 38 (269)
T 1cp2_A 1 MRQVAIYG-------KGGIGKSTTTQNLTSGLHAMGKTIMVVGCD 38 (269)
T ss_dssp CEEEEEEE-------CTTSSHHHHHHHHHHHHHTTTCCEEEEEEC
T ss_pred CcEEEEec-------CCCCcHHHHHHHHHHHHHHCCCcEEEEcCC
Confidence 67666642 266664 5668999999999999988544
No 143
>3zq6_A Putative arsenical pump-driving ATPase; tail-anchored, membrane protein; HET: ADP; 2.11A {Methanothermobacter thermautotrophicusorganism_taxid}
Probab=49.95 E-value=18 Score=33.92 Aligned_cols=40 Identities=15% Similarity=0.096 Sum_probs=28.7
Q ss_pred CCceEEEEeeccccccccCcHHHH--HhHHHHHHHHCCCeEEEEeecC
Q 011163 7 NGFHIIHICTEMDPLVSIGSLASY--VTGLSGALQRKGHLVEVILPKY 52 (492)
Q Consensus 7 ~~mkIl~v~~~~~p~~~~GG~~~~--~~~l~~~L~~~Gh~V~vi~~~~ 52 (492)
+.||++.|+. ..||+|+. ..+|+.+|+++|++|.++..+.
T Consensus 11 ~gm~~i~v~s------gKGGvGKTTvA~~LA~~lA~~G~rVLlvD~D~ 52 (324)
T 3zq6_A 11 KGKTTFVFIG------GKGGVGKTTISAATALWMARSGKKTLVISTDP 52 (324)
T ss_dssp TTBCEEEEEE------ESTTSSHHHHHHHHHHHHHHTTCCEEEEECCS
T ss_pred CCCeEEEEEe------CCCCchHHHHHHHHHHHHHHCCCcEEEEeCCC
Confidence 3466555554 23676654 6678899999999999998654
No 144
>1jbe_A Chemotaxis protein CHEY; signaling protein; 1.08A {Escherichia coli} SCOP: c.23.1.1 PDB: 3chy_A 1a0o_A 1cey_A 1bdj_A 1eay_A 1f4v_A 1ffg_A 1ffs_A 1ffw_A 1fqw_A 2b1j_A 1chn_A 1djm_A 1kmi_Y* 1d4z_A 3olx_A 3olw_A 1cye_A 2che_A 2chf_A ...
Probab=49.76 E-value=80 Score=23.72 Aligned_cols=112 Identities=14% Similarity=0.095 Sum_probs=62.2
Q ss_pred CcEEEEEecCCChhHHHHHHHHHHHhCCCeEEEEeccCHHHHHHHHh--cCCEEEECCC-CCCCchHHHHHhhc-----C
Q 011163 336 GIQFVFTGTNKLPSASRALVSFQEELKDGIVIFVDSYDDALLHLIFS--GSDIILCHSF-HDPLLQVPLKALKY-----G 407 (492)
Q Consensus 336 ~~~lvivG~g~~~~~~~~l~~~~~~~~~~~v~~~~~~~~~~~~~~~~--~adi~v~pS~-~E~~glv~lEAma~-----G 407 (492)
..+++|+.+ ++...+.++...+..+-..+... .+.++....+. ..|++++=.. -+..|+-+++.+.. .
T Consensus 4 ~~~ilivdd--~~~~~~~l~~~l~~~~~~~v~~~--~~~~~a~~~~~~~~~dlvi~D~~l~~~~g~~l~~~l~~~~~~~~ 79 (128)
T 1jbe_A 4 ELKFLVVDD--FSTMRRIVRNLLKELGFNNVEEA--EDGVDALNKLQAGGYGFVISDWNMPNMDGLELLKTIRAXXAMSA 79 (128)
T ss_dssp TCCEEEECS--CHHHHHHHHHHHHHTTCCCEEEE--SSHHHHHHHHTTCCCCEEEEESCCSSSCHHHHHHHHHC--CCTT
T ss_pred ccEEEEECC--CHHHHHHHHHHHHHcCCcEEEee--CCHHHHHHHHHhcCCCEEEEeCCCCCCCHHHHHHHHHhhcccCC
Confidence 356777763 34455566666555421234322 23333323333 3588776443 34457777777653 5
Q ss_pred CceEEEecCCCcccccccccccccceeeeeecCCCHHHHHHHHHHHh
Q 011163 408 AAPIAVTSSDIEFRHFAEFDHESTRFSRFISSTFGNISLSQALEEIK 454 (492)
Q Consensus 408 ~PvV~~~~~~gg~~e~v~~~~~~~g~~G~~~~~~~~~~l~~ai~~~~ 454 (492)
+|+|+... ..-.+.+... ...|..+|+..|.+.+.|.++++.++
T Consensus 80 ~~ii~~s~--~~~~~~~~~~-~~~ga~~~l~KP~~~~~l~~~i~~~~ 123 (128)
T 1jbe_A 80 LPVLMVTA--EAKKENIIAA-AQAGASGYVVKPFTAATLEEKLNKIF 123 (128)
T ss_dssp CCEEEEES--SCCHHHHHHH-HHTTCSEEEESSCCHHHHHHHHHHHH
T ss_pred CcEEEEec--CccHHHHHHH-HHhCcCceeecCCCHHHHHHHHHHHH
Confidence 67776543 2222222111 11356789999999999999998875
No 145
>2hna_A Protein MIOC, flavodoxin; alpha-beta sandwich, flavodoxin fold, electron transport; NMR {Escherichia coli} PDB: 2hnb_A
Probab=49.58 E-value=18 Score=29.19 Aligned_cols=36 Identities=19% Similarity=0.248 Sum_probs=29.3
Q ss_pred ceEEEEeeccccccccCcHHHHHhHHHHHHHHCCCeEEEEe
Q 011163 9 FHIIHICTEMDPLVSIGSLASYVTGLSGALQRKGHLVEVIL 49 (492)
Q Consensus 9 mkIl~v~~~~~p~~~~GG~~~~~~~l~~~L~~~Gh~V~vi~ 49 (492)
|||+++.. +.+|.++.+...++++|.+.|++|.++-
T Consensus 2 ~ki~I~Y~-----S~tGnT~~~A~~ia~~l~~~g~~v~~~~ 37 (147)
T 2hna_A 2 ADITLISG-----STLGGAEYVAEHLAEKLEEAGFTTETLH 37 (147)
T ss_dssp CSEEEECC-----TTSCCCHHHHHHHHHHHHHTTCCEEEEC
T ss_pred CeEEEEEE-----CCchHHHHHHHHHHHHHHHCCCceEEec
Confidence 47766542 2469999999999999999999998774
No 146
>2q62_A ARSH; alpha/beta, flavoprotein; 1.80A {Sinorhizobium meliloti}
Probab=49.53 E-value=23 Score=31.67 Aligned_cols=44 Identities=14% Similarity=0.069 Sum_probs=30.9
Q ss_pred ccCCCceEEEEeeccccccccCcHHHHHhHHHHHHHHCCCeEEEEee
Q 011163 4 WLRNGFHIIHICTEMDPLVSIGSLASYVTGLSGALQRKGHLVEVILP 50 (492)
Q Consensus 4 ~~~~~mkIl~v~~~~~p~~~~GG~~~~~~~l~~~L~~~Gh~V~vi~~ 50 (492)
.++..|||++|+. .|. ..|-....+..+++++.+.|++|.++-.
T Consensus 30 ~~~~~mkIliI~G--S~r-~~s~t~~La~~~~~~l~~~g~eve~idL 73 (247)
T 2q62_A 30 FSTHRPRILILYG--SLR-TVSYSRLLAEEARRLLEFFGAEVKVFDP 73 (247)
T ss_dssp CCCSCCEEEEEEC--CCC-SSCHHHHHHHHHHHHHHHTTCEEEECCC
T ss_pred ccCCCCeEEEEEc--cCC-CCCHHHHHHHHHHHHHhhCCCEEEEEEh
Confidence 3455689999996 343 1233456667788888889999988864
No 147
>3pg5_A Uncharacterized protein; structural genomics, PSI-biology, protein structure initiati northeast structural genomics consortium, NESG; 3.30A {Corynebacterium diphtheriae}
Probab=49.24 E-value=16 Score=34.81 Aligned_cols=37 Identities=14% Similarity=0.152 Sum_probs=28.6
Q ss_pred ceEEEEeeccccccccCcHHHHH--hHHHHHHHHCCCeEEEEeec
Q 011163 9 FHIIHICTEMDPLVSIGSLASYV--TGLSGALQRKGHLVEVILPK 51 (492)
Q Consensus 9 mkIl~v~~~~~p~~~~GG~~~~~--~~l~~~L~~~Gh~V~vi~~~ 51 (492)
|||+.|+. ..||+|+.+ .+|+..|+++|.+|.++=.+
T Consensus 1 MkvIav~s------~KGGvGKTT~a~nLA~~LA~~G~rVLlID~D 39 (361)
T 3pg5_A 1 MRTISFFN------NKGGVGKTTLSTNVAHYFALQGKRVLYVDCD 39 (361)
T ss_dssp CEEEEBCC------SSCCHHHHHHHHHHHHHHHHTTCCEEEEECC
T ss_pred CeEEEEEc------CCCCCcHHHHHHHHHHHHHhCCCcEEEEEcC
Confidence 78777765 248887654 66899999999999999654
No 148
>2hy5_B Intracellular sulfur oxidation protein DSRF; DSRE, DSRF, sulfur, structural genomics, PSI, protein initiative, berkeley structural genomics center, BSGC, TRAN; 1.72A {Allochromatium vinosum} SCOP: c.114.1.1 PDB: 2hyb_B
Probab=49.03 E-value=23 Score=28.36 Aligned_cols=42 Identities=10% Similarity=-0.140 Sum_probs=30.8
Q ss_pred Cc-eEEEEeeccccccccCcHHHHHhHHHHHHHHCCCeEEEEeecC
Q 011163 8 GF-HIIHICTEMDPLVSIGSLASYVTGLSGALQRKGHLVEVILPKY 52 (492)
Q Consensus 8 ~m-kIl~v~~~~~p~~~~GG~~~~~~~l~~~L~~~Gh~V~vi~~~~ 52 (492)
.| |++++.. -.|+. .-...-..+++.++.+.||+|.|+-...
T Consensus 4 ~Mkk~~ivv~-~~P~g--~~~~~~al~~a~a~~a~~~~v~Vff~~D 46 (136)
T 2hy5_B 4 VVKKFMYLNR-KAPYG--TIYAWEALEVVLIGAAFDQDVCVLFLDD 46 (136)
T ss_dssp -CCEEEEEEC-SCTTT--SSHHHHHHHHHHHHGGGCCEEEEEECGG
T ss_pred chhEEEEEEe-CCCCC--cHHHHHHHHHHHHHHhCCCCEEEEEEhH
Confidence 47 4988886 46752 2355567889999999999999998653
No 149
>4e7p_A Response regulator; DNA binding, cytosol, transcription regulator; 1.89A {Streptococcus pneumoniae} PDB: 4e7o_A
Probab=48.97 E-value=94 Score=24.30 Aligned_cols=114 Identities=9% Similarity=0.052 Sum_probs=62.4
Q ss_pred cEEEEEecCCChhHHHHHHHHHHHhCCCeEEEEeccCHHHHHHHHh--cCCEEEECCC-CCCCchHHHHHhh---cCCce
Q 011163 337 IQFVFTGTNKLPSASRALVSFQEELKDGIVIFVDSYDDALLHLIFS--GSDIILCHSF-HDPLLQVPLKALK---YGAAP 410 (492)
Q Consensus 337 ~~lvivG~g~~~~~~~~l~~~~~~~~~~~v~~~~~~~~~~~~~~~~--~adi~v~pS~-~E~~glv~lEAma---~G~Pv 410 (492)
.+++|+.+ ++...+.++...+..+ +.......-+.++....+. ..|++++=.. .+.-|+.+++.+. ..+|+
T Consensus 21 ~~iLivdd--~~~~~~~l~~~L~~~~-~~~~v~~~~~~~~al~~l~~~~~dlii~D~~l~~~~g~~~~~~l~~~~~~~~i 97 (150)
T 4e7p_A 21 MKVLVAED--QSMLRDAMCQLLTLQP-DVESVLQAKNGQEAIQLLEKESVDIAILDVEMPVKTGLEVLEWIRSEKLETKV 97 (150)
T ss_dssp EEEEEECS--CHHHHHHHHHHHHTST-TEEEEEEESSHHHHHHHHTTSCCSEEEECSSCSSSCHHHHHHHHHHTTCSCEE
T ss_pred cEEEEEcC--CHHHHHHHHHHHHhCC-CcEEEEEECCHHHHHHHhhccCCCEEEEeCCCCCCcHHHHHHHHHHhCCCCeE
Confidence 46666663 2344455555555432 1122222223333333333 3577776543 3456666666654 36777
Q ss_pred EEEecCCCcccccccccccccceeeeeecCCCHHHHHHHHHHHhcC
Q 011163 411 IAVTSSDIEFRHFAEFDHESTRFSRFISSTFGNISLSQALEEIKNN 456 (492)
Q Consensus 411 V~~~~~~gg~~e~v~~~~~~~g~~G~~~~~~~~~~l~~ai~~~~~~ 456 (492)
|+... ..-.+.+... ...|..+|+..|.+.+.|.++|..+++.
T Consensus 98 i~ls~--~~~~~~~~~~-~~~g~~~~l~Kp~~~~~l~~~i~~~~~~ 140 (150)
T 4e7p_A 98 VVVTT--FKRAGYFERA-VKAGVDAYVLKERSIADLMQTLHTVLEG 140 (150)
T ss_dssp EEEES--CCCHHHHHHH-HHTTCSEEEETTSCHHHHHHHHHHHHTT
T ss_pred EEEeC--CCCHHHHHHH-HHCCCcEEEecCCCHHHHHHHHHHHHcC
Confidence 77654 2222222111 1146678999999999999999998754
No 150
>3end_A Light-independent protochlorophyllide reductase iron-sulfur ATP-binding protein; BCHL, electron donor, DPOR, Fe protein, nitrogenase; HET: ADP; 1.63A {Rhodobacter sphaeroides 2} PDB: 3fwy_A*
Probab=48.67 E-value=16 Score=33.65 Aligned_cols=39 Identities=21% Similarity=0.213 Sum_probs=28.4
Q ss_pred CCCceEEEEeeccccccccCcHH--HHHhHHHHHHHHCCCeEEEEeec
Q 011163 6 RNGFHIIHICTEMDPLVSIGSLA--SYVTGLSGALQRKGHLVEVILPK 51 (492)
Q Consensus 6 ~~~mkIl~v~~~~~p~~~~GG~~--~~~~~l~~~L~~~Gh~V~vi~~~ 51 (492)
.++|||+.|+ . .||+| +.+.+|+.+|+++|.+|.++=.+
T Consensus 38 ~~~~~vI~v~-~------KGGvGKTT~a~nLA~~La~~G~~VlliD~D 78 (307)
T 3end_A 38 ITGAKVFAVY-G------KGGIGKSTTSSNLSAAFSILGKRVLQIGCD 78 (307)
T ss_dssp --CCEEEEEE-C------STTSSHHHHHHHHHHHHHHTTCCEEEEEES
T ss_pred cCCceEEEEE-C------CCCccHHHHHHHHHHHHHHCCCeEEEEeCC
Confidence 4457877776 3 25555 56688999999999999999654
No 151
>3nvt_A 3-deoxy-D-arabino-heptulosonate 7-phosphate synth; bifunctional 3-deoxy-7-phosphoheptulonate synthase/chorismat listeria monocytogenes EGD-E; 1.95A {Listeria monocytogenes} PDB: 3tfc_A*
Probab=48.51 E-value=1.7e+02 Score=27.92 Aligned_cols=91 Identities=13% Similarity=0.108 Sum_probs=61.3
Q ss_pred CHHHHHHHHHHHhHcCcEEEEEecC-----------CChhHHHHHHHHHHHhCCCeEEEEeccCHHHHHHHHhcCCEEEE
Q 011163 321 FLENLKAVVRGAKMRGIQFVFTGTN-----------KLPSASRALVSFQEELKDGIVIFVDSYDDALLHLIFSGSDIILC 389 (492)
Q Consensus 321 g~~~li~a~~~l~~~~~~lvivG~g-----------~~~~~~~~l~~~~~~~~~~~v~~~~~~~~~~~~~~~~~adi~v~ 389 (492)
..+..++.+..+.+.++.++..|.- ...+....+++.+++.+ -..+...++.+.+..+...+|++=.
T Consensus 154 s~e~a~~~a~~~k~aGa~~vk~q~fkprts~~~f~gl~~egl~~L~~~~~~~G--l~~~te~~d~~~~~~l~~~vd~lkI 231 (385)
T 3nvt_A 154 SYEQVAAVAESIKAKGLKLIRGGAFKPRTSPYDFQGLGLEGLKILKRVSDEYG--LGVISEIVTPADIEVALDYVDVIQI 231 (385)
T ss_dssp CHHHHHHHHHHHHHTTCCEEECBSSCCCSSTTSCCCCTHHHHHHHHHHHHHHT--CEEEEECCSGGGHHHHTTTCSEEEE
T ss_pred CHHHHHHHHHHHHHcCCCeEEcccccCCCChHhhcCCCHHHHHHHHHHHHHcC--CEEEEecCCHHHHHHHHhhCCEEEE
Confidence 6777888887777667777766631 11122346666666663 3344556777777666667999999
Q ss_pred CCC-CCCCchHHHHHhhcCCceEEEe
Q 011163 390 HSF-HDPLLQVPLKALKYGAAPIAVT 414 (492)
Q Consensus 390 pS~-~E~~glv~lEAma~G~PvV~~~ 414 (492)
||. .+.+++. -++...|+||+.++
T Consensus 232 gs~~~~n~~LL-~~~a~~gkPVilk~ 256 (385)
T 3nvt_A 232 GARNMQNFELL-KAAGRVDKPILLKR 256 (385)
T ss_dssp CGGGTTCHHHH-HHHHTSSSCEEEEC
T ss_pred CcccccCHHHH-HHHHccCCcEEEec
Confidence 997 5776543 34567899999986
No 152
>3cnb_A DNA-binding response regulator, MERR family; signal receiver domain, DNA binding protein, protein structu initiative, PSI-2; 2.00A {Colwellia psychrerythraea}
Probab=48.41 E-value=90 Score=23.92 Aligned_cols=114 Identities=10% Similarity=0.016 Sum_probs=64.1
Q ss_pred CcEEEEEecCCChhHHHHHHHHHHHhCCCe-EEEEeccCHHHHHHHH--hcCCEEEECCC-CCCCchHHHHHhhc-----
Q 011163 336 GIQFVFTGTNKLPSASRALVSFQEELKDGI-VIFVDSYDDALLHLIF--SGSDIILCHSF-HDPLLQVPLKALKY----- 406 (492)
Q Consensus 336 ~~~lvivG~g~~~~~~~~l~~~~~~~~~~~-v~~~~~~~~~~~~~~~--~~adi~v~pS~-~E~~glv~lEAma~----- 406 (492)
..+++|+.+ ++...+.++...+....-. +... -+.++....+ ...|++++-.. .+.-|+-+++.+..
T Consensus 8 ~~~iLivdd--~~~~~~~l~~~L~~~~~~~~v~~~--~~~~~a~~~l~~~~~dlii~d~~l~~~~g~~~~~~l~~~~~~~ 83 (143)
T 3cnb_A 8 DFSILIIED--DKEFADMLTQFLENLFPYAKIKIA--YNPFDAGDLLHTVKPDVVMLDLMMVGMDGFSICHRIKSTPATA 83 (143)
T ss_dssp -CEEEEECS--CHHHHHHHHHHHHHHCTTCEEEEE--CSHHHHHHHHHHTCCSEEEEETTCTTSCHHHHHHHHHTSTTTT
T ss_pred CceEEEEEC--CHHHHHHHHHHHHhccCccEEEEE--CCHHHHHHHHHhcCCCEEEEecccCCCcHHHHHHHHHhCcccc
Confidence 467777773 3455566666666521233 4432 2222222332 24688877654 34456666666543
Q ss_pred CCceEEEecCCCcccccccccccccceeeeeecCCCHHHHHHHHHHHhcC
Q 011163 407 GAAPIAVTSSDIEFRHFAEFDHESTRFSRFISSTFGNISLSQALEEIKNN 456 (492)
Q Consensus 407 G~PvV~~~~~~gg~~e~v~~~~~~~g~~G~~~~~~~~~~l~~ai~~~~~~ 456 (492)
.+|+|+... ..-.+.+.. ....|..+++..|.+.+.|.++|..+++.
T Consensus 84 ~~~ii~~s~--~~~~~~~~~-~~~~g~~~~l~kP~~~~~l~~~i~~~~~~ 130 (143)
T 3cnb_A 84 NIIVIAMTG--ALTDDNVSR-IVALGAETCFGKPLNFTLLEKTIKQLVEQ 130 (143)
T ss_dssp TSEEEEEES--SCCHHHHHH-HHHTTCSEEEESSCCHHHHHHHHHHHHHT
T ss_pred CCcEEEEeC--CCCHHHHHH-HHhcCCcEEEeCCCCHHHHHHHHHHHHHh
Confidence 577776543 222222111 01145678999999999999999988643
No 153
>1bvy_F Protein (cytochrome P450 BM-3); fatty acid monooxygenase, hemoprotein, flavoprotein, electron transfer, oxidoreductase; HET: HEM FMN; 2.03A {Bacillus megaterium} SCOP: c.23.5.1
Probab=48.19 E-value=18 Score=30.91 Aligned_cols=39 Identities=13% Similarity=0.169 Sum_probs=31.7
Q ss_pred CceEEEEeeccccccccCcHHHHHhHHHHHHHHCCCeEEEEeec
Q 011163 8 GFHIIHICTEMDPLVSIGSLASYVTGLSGALQRKGHLVEVILPK 51 (492)
Q Consensus 8 ~mkIl~v~~~~~p~~~~GG~~~~~~~l~~~L~~~Gh~V~vi~~~ 51 (492)
.|||+++.. +.+|.++.+...+++.|.+.|++|.++...
T Consensus 21 ~~kv~IvY~-----S~tGnTe~~A~~ia~~l~~~g~~v~v~~l~ 59 (191)
T 1bvy_F 21 NTPLLVLYG-----SNMGTAEGTARDLADIAMSKGFAPQVATLD 59 (191)
T ss_dssp CCCEEEEEE-----CSSSHHHHHHHHHHHHHHTTTCCCEEEEGG
T ss_pred CCeEEEEEE-----CCChHHHHHHHHHHHHHHhCCCceEEeeHH
Confidence 467777654 256999999999999999999999887654
No 154
>4ep1_A Otcase, ornithine carbamoyltransferase; structural genomics, niaid, national institute of allergy AN infectious diseases; 3.25A {Bacillus anthracis}
Probab=48.18 E-value=1.1e+02 Score=28.69 Aligned_cols=104 Identities=11% Similarity=0.121 Sum_probs=64.0
Q ss_pred ecCCCCCCCcCCCCCcccccccCccCccChHHHHHHHHHHhCCCCCCCceEEEEEeccccccCHHHHHHHHHHHhHcCcE
Q 011163 259 APCGFDSSTWDPSNDKFLTENYCAEDMKGKTVCKVTLQQQLGLSKDASTIVVGCIFSDVSDVFLENLKAVVRGAKMRGIQ 338 (492)
Q Consensus 259 I~nGvd~~~f~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~lg~~~~~~~~~i~~~grl~~~Kg~~~li~a~~~l~~~~~~ 338 (492)
|-||-| +..+|. ..-.+--.+++++|--. .+.+.++|-+.. =...++.++..+ +++
T Consensus 150 VINag~-~~~HPt---------------QaLaDl~TI~E~~G~l~---glkva~vGD~~n--va~Sl~~~~~~~---G~~ 205 (340)
T 4ep1_A 150 VINGLT-DDHHPC---------------QALADLMTIYEETNTFK---GIKLAYVGDGNN--VCHSLLLASAKV---GMH 205 (340)
T ss_dssp EEEEEC-SSCCHH---------------HHHHHHHHHHHHHSCCT---TCEEEEESCCCH--HHHHHHHHHHHH---TCE
T ss_pred EEeCCC-CCCCcH---------------HHHHHHHHHHHHhCCCC---CCEEEEECCCch--hHHHHHHHHHHc---CCE
Confidence 557777 567774 11224456788888432 367889998722 245667777666 689
Q ss_pred EEEEecCC---ChhHHHHHHHHHHHhCCCeEEEEeccCHHHHHHHHhcCCEEEECCC
Q 011163 339 FVFTGTNK---LPSASRALVSFQEELKDGIVIFVDSYDDALLHLIFSGSDIILCHSF 392 (492)
Q Consensus 339 lvivG~g~---~~~~~~~l~~~~~~~~~~~v~~~~~~~~~~~~~~~~~adi~v~pS~ 392 (492)
+.++++.+ ++...+.+++.+++.+ ..+... .+. .+.+..||++....+
T Consensus 206 v~~~~P~~~~~~~~~~~~~~~~a~~~G-~~v~~~--~d~---~eav~~aDVvyt~~w 256 (340)
T 4ep1_A 206 MTVATPVGYRPNEEIVKKALAIAKETG-AEIEIL--HNP---ELAVNEADFIYTDVW 256 (340)
T ss_dssp EEEECCTTCCCCHHHHHHHHHHHHHHC-CCEEEE--SCH---HHHHTTCSEEEECCC
T ss_pred EEEECCcccCCCHHHHHHHHHHHHHcC-CeEEEE--CCH---HHHhCCCCEEEecCc
Confidence 99998542 2334445556666663 456543 232 245799999988765
No 155
>1ykg_A SIR-FP, sulfite reductase [NADPH] flavoprotein alpha- component; electron transport; HET: FMN; NMR {Escherichia coli} SCOP: c.23.5.2
Probab=47.82 E-value=13 Score=30.82 Aligned_cols=39 Identities=15% Similarity=0.049 Sum_probs=29.0
Q ss_pred CceEEEEeeccccccccCcHHHHHhHHHHHHHHCCCeEEEEeec
Q 011163 8 GFHIIHICTEMDPLVSIGSLASYVTGLSGALQRKGHLVEVILPK 51 (492)
Q Consensus 8 ~mkIl~v~~~~~p~~~~GG~~~~~~~l~~~L~~~Gh~V~vi~~~ 51 (492)
.|||+++.. +.+|.++.+...+++.|.+.|++|.++...
T Consensus 9 ~~ki~I~Y~-----S~tGnT~~~A~~ia~~l~~~g~~v~~~~~~ 47 (167)
T 1ykg_A 9 MPGITIISA-----SQTGNARRVAEALRDDLLAAKLNVKLVNAG 47 (167)
T ss_dssp ---CEEEEE-----CSSSHHHHHHHHHHHHHHHHTCCCEEEEGG
T ss_pred CCeEEEEEE-----CCchHHHHHHHHHHHHHHHCCCceEEeehh
Confidence 357766643 246999999999999999999999887543
No 156
>2dkn_A 3-alpha-hydroxysteroid dehydrogenase; oxidoreductase, rossmann fold; HET: NAI; 1.80A {Pseudomonas SP}
Probab=47.66 E-value=18 Score=31.91 Aligned_cols=34 Identities=29% Similarity=0.331 Sum_probs=23.0
Q ss_pred ceEEEEeeccccccccCcHHHHHhHHHHHHHHCCCeEEEEeec
Q 011163 9 FHIIHICTEMDPLVSIGSLASYVTGLSGALQRKGHLVEVILPK 51 (492)
Q Consensus 9 mkIl~v~~~~~p~~~~GG~~~~~~~l~~~L~~~Gh~V~vi~~~ 51 (492)
||.++|+- ..||+| ..+++.|.++|++|.++...
T Consensus 1 Mk~vlVtG------asg~iG---~~l~~~L~~~g~~V~~~~r~ 34 (255)
T 2dkn_A 1 MSVIAITG------SASGIG---AALKELLARAGHTVIGIDRG 34 (255)
T ss_dssp -CEEEEET------TTSHHH---HHHHHHHHHTTCEEEEEESS
T ss_pred CcEEEEeC------CCcHHH---HHHHHHHHhCCCEEEEEeCC
Confidence 55555553 346666 45678899999999888653
No 157
>3b6i_A Flavoprotein WRBA; flavoproteins, NADH:quinone oxidoreductase, FMN; HET: FMN 15P; 1.66A {Escherichia coli} PDB: 2r96_A* 2r97_A 2rg1_A* 3b6j_A* 3b6k_A* 3b6m_A*
Probab=47.34 E-value=23 Score=30.02 Aligned_cols=38 Identities=11% Similarity=0.148 Sum_probs=31.6
Q ss_pred ceEEEEeeccccccccCcHHHHHhHHHHHHHH-CCCeEEEEeec
Q 011163 9 FHIIHICTEMDPLVSIGSLASYVTGLSGALQR-KGHLVEVILPK 51 (492)
Q Consensus 9 mkIl~v~~~~~p~~~~GG~~~~~~~l~~~L~~-~Gh~V~vi~~~ 51 (492)
|||++|... + .|-.......+++++.+ .|++|.++-..
T Consensus 2 mkilii~~S--~---~g~t~~la~~i~~~l~~~~g~~v~~~~l~ 40 (198)
T 3b6i_A 2 AKVLVLYYS--M---YGHIETMARAVAEGASKVDGAEVVVKRVP 40 (198)
T ss_dssp CEEEEEECC--S---SSHHHHHHHHHHHHHHTSTTCEEEEEECC
T ss_pred CeEEEEEeC--C---CcHHHHHHHHHHHHHhhcCCCEEEEEEcc
Confidence 699988752 3 47889999999999998 89999998754
No 158
>2qr3_A Two-component system response regulator; structural genomics, signal receiver, PSI-2, protein structu initiative; 1.80A {Bacteroides fragilis}
Probab=46.98 E-value=94 Score=23.73 Aligned_cols=112 Identities=13% Similarity=0.041 Sum_probs=60.6
Q ss_pred cEEEEEecCCChhHHHHHHHHHHHhCCCeEEEEeccCHHHHHHHHh--cCCEEEECCCC------CCCchHHHHHhh---
Q 011163 337 IQFVFTGTNKLPSASRALVSFQEELKDGIVIFVDSYDDALLHLIFS--GSDIILCHSFH------DPLLQVPLKALK--- 405 (492)
Q Consensus 337 ~~lvivG~g~~~~~~~~l~~~~~~~~~~~v~~~~~~~~~~~~~~~~--~adi~v~pS~~------E~~glv~lEAma--- 405 (492)
.+++|+.+ ++...+.++...+..+ -.|.. .-+.++....+. ..|++++-... +.-|+.+++.+.
T Consensus 4 ~~ilivdd--~~~~~~~l~~~L~~~g-~~v~~--~~~~~~a~~~l~~~~~dlvi~d~~~~~~~~~~~~g~~~~~~l~~~~ 78 (140)
T 2qr3_A 4 GTIIIVDD--NKGVLTAVQLLLKNHF-SKVIT--LSSPVSLSTVLREENPEVVLLDMNFTSGINNGNEGLFWLHEIKRQY 78 (140)
T ss_dssp CEEEEECS--CHHHHHHHHHHHTTTS-SEEEE--ECCHHHHHHHHHHSCEEEEEEETTTTC-----CCHHHHHHHHHHHC
T ss_pred ceEEEEeC--CHHHHHHHHHHHHhCC-cEEEE--eCCHHHHHHHHHcCCCCEEEEeCCcCCCCCCCccHHHHHHHHHhhC
Confidence 46777763 2344555555554432 33432 223333323333 35777664332 445666666553
Q ss_pred cCCceEEEecCCCcccccccccccccceeeeeecCCCHHHHHHHHHHHhcC
Q 011163 406 YGAAPIAVTSSDIEFRHFAEFDHESTRFSRFISSTFGNISLSQALEEIKNN 456 (492)
Q Consensus 406 ~G~PvV~~~~~~gg~~e~v~~~~~~~g~~G~~~~~~~~~~l~~ai~~~~~~ 456 (492)
..+|+|+... ..-.+.+... ...|..+++..|.+.+.|.++|..++..
T Consensus 79 ~~~~ii~ls~--~~~~~~~~~~-~~~g~~~~l~kp~~~~~l~~~l~~~~~~ 126 (140)
T 2qr3_A 79 RDLPVVLFTA--YADIDLAVRG-IKEGASDFVVKPWDNQKLLETLLNAASQ 126 (140)
T ss_dssp TTCCEEEEEE--GGGHHHHHHH-HHTTCCEEEEESCCHHHHHHHHHHHHTC
T ss_pred cCCCEEEEEC--CCCHHHHHHH-HHcCchheeeCCCCHHHHHHHHHHHHHh
Confidence 4677777543 2222222111 1145678999999999999999998764
No 159
>3hr4_A Nitric oxide synthase, inducible; inducible nitric oxide synthase, NOS, INOS, CALM binding, FAD, FMN, heme, iron, metal-binding, NADP, oxidore phosphoprotein; HET: FMN; 2.50A {Homo sapiens}
Probab=46.67 E-value=15 Score=32.36 Aligned_cols=45 Identities=11% Similarity=0.111 Sum_probs=34.4
Q ss_pred CccccCCCceEEEEeeccccccccCcHHHHHhHHHHHHHHCCCeEEEEeec
Q 011163 1 MEKWLRNGFHIIHICTEMDPLVSIGSLASYVTGLSGALQRKGHLVEVILPK 51 (492)
Q Consensus 1 ~~~~~~~~mkIl~v~~~~~p~~~~GG~~~~~~~l~~~L~~~Gh~V~vi~~~ 51 (492)
|+|...+.++|+++.. +.+|-++.+...|++.+ +.|+++.|+...
T Consensus 33 ~~~~~~~~~kv~IlYg-----S~tGnte~~A~~La~~l-~~g~~v~v~~l~ 77 (219)
T 3hr4_A 33 MRKTMASRVRVTILFA-----TETGKSEALAWDLGALF-SCAFNPKVVCMD 77 (219)
T ss_dssp HHHHHHTSCEEEEEEE-----CSSSHHHHHHHHHHHHH-TTTSEEEEEEGG
T ss_pred HHHHHhcCCcEEEEEE-----CCchHHHHHHHHHHHHH-HcCCCeEEEEcc
Confidence 3455556677777664 35799999999999988 689999988754
No 160
>1fjh_A 3alpha-hydroxysteroid dehydrogenase/carbonyl reductase; short chain dehydrogenase, SDR, xenobiotic, metyrapone, oligomerisation; 1.68A {Comamonas testosteroni} SCOP: c.2.1.2 PDB: 1fk8_A*
Probab=46.43 E-value=20 Score=31.87 Aligned_cols=34 Identities=21% Similarity=0.248 Sum_probs=24.9
Q ss_pred ceEEEEeeccccccccCcHHHHHhHHHHHHHHCCCeEEEEeec
Q 011163 9 FHIIHICTEMDPLVSIGSLASYVTGLSGALQRKGHLVEVILPK 51 (492)
Q Consensus 9 mkIl~v~~~~~p~~~~GG~~~~~~~l~~~L~~~Gh~V~vi~~~ 51 (492)
||.++||- ..||+|. .+++.|.++|++|.++...
T Consensus 1 mk~vlVTG------as~gIG~---~~a~~l~~~G~~V~~~~r~ 34 (257)
T 1fjh_A 1 MSIIVISG------CATGIGA---ATRKVLEAAGHQIVGIDIR 34 (257)
T ss_dssp CCEEEEET------TTSHHHH---HHHHHHHHTTCEEEEEESS
T ss_pred CCEEEEeC------CCCHHHH---HHHHHHHHCCCEEEEEeCC
Confidence 67667774 3477774 5788899999998887643
No 161
>3ruf_A WBGU; rossmann fold, UDP-hexose 4-epimerase, isomerase; HET: NAD UDP; 2.00A {Plesiomonas shigelloides} SCOP: c.2.1.2 PDB: 3ru9_A* 3rud_A* 3rue_A* 3rua_A* 3ruh_A* 3ruc_A* 3ru7_A* 3lu1_A*
Probab=46.41 E-value=10 Score=35.71 Aligned_cols=37 Identities=11% Similarity=-0.059 Sum_probs=25.3
Q ss_pred CCCceEEEEeeccccccccCcHHHHHhHHHHHHHHCCCeEEEEeecC
Q 011163 6 RNGFHIIHICTEMDPLVSIGSLASYVTGLSGALQRKGHLVEVILPKY 52 (492)
Q Consensus 6 ~~~mkIl~v~~~~~p~~~~GG~~~~~~~l~~~L~~~Gh~V~vi~~~~ 52 (492)
.+.|+|+++. ..|++| ..|++.|.++||+|.++....
T Consensus 23 ~~~~~vlVtG-------atG~iG---~~l~~~L~~~g~~V~~~~r~~ 59 (351)
T 3ruf_A 23 FSPKTWLITG-------VAGFIG---SNLLEKLLKLNQVVIGLDNFS 59 (351)
T ss_dssp HSCCEEEEET-------TTSHHH---HHHHHHHHHTTCEEEEEECCS
T ss_pred CCCCeEEEEC-------CCcHHH---HHHHHHHHHCCCEEEEEeCCC
Confidence 3456776532 235555 567888999999999988643
No 162
>2i6u_A Otcase, ornithine carbamoyltransferase; X-RAY crystallography, ornithine carbamyoltransferase, carbamoyl phosphate, L- norvaline; 2.20A {Mycobacterium tuberculosis} PDB: 2p2g_A
Probab=45.63 E-value=1.6e+02 Score=27.08 Aligned_cols=105 Identities=14% Similarity=0.173 Sum_probs=63.7
Q ss_pred ecCCCCCCCcCCCCCcccccccCccCccChHHHHHHHHHHhCCCCCCCceEEEEEeccccccCHHHHHHHHHHHhHcCcE
Q 011163 259 APCGFDSSTWDPSNDKFLTENYCAEDMKGKTVCKVTLQQQLGLSKDASTIVVGCIFSDVSDVFLENLKAVVRGAKMRGIQ 338 (492)
Q Consensus 259 I~nGvd~~~f~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~lg~~~~~~~~~i~~~grl~~~Kg~~~li~a~~~l~~~~~~ 338 (492)
|-||-+ +..+|. ..-.+--.+++++|--. ...+.++|-. ...=...++.++..+ +++
T Consensus 119 VINa~~-~~~HPt---------------QaLaDl~Ti~e~~g~l~---gl~va~vGD~-~~rva~Sl~~~~~~~---g~~ 175 (307)
T 2i6u_A 119 VINALS-DEFHPC---------------QVLADLQTIAERKGALR---GLRLSYFGDG-ANNMAHSLLLGGVTA---GIH 175 (307)
T ss_dssp EEESCC-SSCCHH---------------HHHHHHHHHHHHHSCCT---TCEEEEESCT-TSHHHHHHHHHHHHT---TCE
T ss_pred EEcCCC-CCcCcc---------------HHHHHHHHHHHHhCCcC---CeEEEEECCC-CcCcHHHHHHHHHHC---CCE
Confidence 446766 677775 11224456778887322 3678899986 222245666666555 689
Q ss_pred EEEEecCC---ChhHHHHHHHHHHHhCCCeEEEEeccCHHHHHHHHhcCCEEEECCC
Q 011163 339 FVFTGTNK---LPSASRALVSFQEELKDGIVIFVDSYDDALLHLIFSGSDIILCHSF 392 (492)
Q Consensus 339 lvivG~g~---~~~~~~~l~~~~~~~~~~~v~~~~~~~~~~~~~~~~~adi~v~pS~ 392 (492)
+.++++.+ +++..+.+++.+++.+ .++... .+. .+.+..||++....+
T Consensus 176 v~~~~P~~~~~~~~~~~~~~~~a~~~G-~~~~~~--~d~---~eav~~aDvvy~~~w 226 (307)
T 2i6u_A 176 VTVAAPEGFLPDPSVRAAAERRAQDTG-ASVTVT--ADA---HAAAAGADVLVTDTW 226 (307)
T ss_dssp EEEECCTTSCCCHHHHHHHHHHHHHHT-CCEEEE--SCH---HHHHTTCSEEEECCS
T ss_pred EEEECCccccCCHHHHHHHHHHHHHcC-CeEEEE--ECH---HHHhcCCCEEEecce
Confidence 99999642 1233444566666663 456543 222 245799999998654
No 163
>2d1p_B TUSC, hypothetical UPF0116 protein YHEM; tRNA modification, sulfur transfer, structural genomics, translation; 2.15A {Escherichia coli} SCOP: c.114.1.1
Probab=45.48 E-value=31 Score=26.72 Aligned_cols=40 Identities=10% Similarity=-0.081 Sum_probs=29.2
Q ss_pred eEEEEeeccccccccCcHHHHHhHHHHHHHHCCCeEEEEeecC
Q 011163 10 HIIHICTEMDPLVSIGSLASYVTGLSGALQRKGHLVEVILPKY 52 (492)
Q Consensus 10 kIl~v~~~~~p~~~~GG~~~~~~~l~~~L~~~Gh~V~vi~~~~ 52 (492)
|++++... .|+. .-...-..+++.++...||+|.|+-...
T Consensus 3 k~~~vv~~-~P~g--~~~~~~al~~a~a~~a~~~~v~vff~~D 42 (119)
T 2d1p_B 3 RIAFVFST-APHG--TAAGREGLDALLATSALTDDLAVFFIAD 42 (119)
T ss_dssp CEEEEECS-CTTT--STHHHHHHHHHHHHHTTCSCEEEEECGG
T ss_pred EEEEEEcC-CCCC--cHHHHHHHHHHHHHHhCCCCEEEEEehH
Confidence 58888764 6652 2344556789999999999999987653
No 164
>3q9l_A Septum site-determining protein MIND; ATPase, bacterial cell division inhibitor, MINC, MINE, cell hydrolase; HET: ATP; 2.34A {Escherichia coli} PDB: 3r9i_A* 3r9j_A*
Probab=45.45 E-value=20 Score=31.89 Aligned_cols=38 Identities=21% Similarity=0.248 Sum_probs=28.1
Q ss_pred ceEEEEeeccccccccCcH--HHHHhHHHHHHHHCCCeEEEEeecC
Q 011163 9 FHIIHICTEMDPLVSIGSL--ASYVTGLSGALQRKGHLVEVILPKY 52 (492)
Q Consensus 9 mkIl~v~~~~~p~~~~GG~--~~~~~~l~~~L~~~Gh~V~vi~~~~ 52 (492)
|||+.|+.. .||+ .+.+.+|+.+|+++|++|.++=.+.
T Consensus 2 ~~vi~v~s~------kgGvGKTt~a~~LA~~la~~g~~VlliD~D~ 41 (260)
T 3q9l_A 2 ARIIVVTSG------KGGVGKTTSSAAIATGLAQKGKKTVVIDFAI 41 (260)
T ss_dssp CEEEEEECS------STTSSHHHHHHHHHHHHHHTTCCEEEEECCC
T ss_pred CeEEEEECC------CCCCcHHHHHHHHHHHHHhCCCcEEEEECCC
Confidence 477676652 3555 4567889999999999999986553
No 165
>3i42_A Response regulator receiver domain protein (CHEY- like); structural genomics, PSI-2, protein structure initiative; 2.15A {Methylobacillus flagellatus KT} SCOP: c.23.1.0
Probab=45.34 E-value=94 Score=23.28 Aligned_cols=111 Identities=14% Similarity=0.118 Sum_probs=62.5
Q ss_pred cEEEEEecCCChhHHHHHHHHHHHhCCCeEEEEeccCHHHHHHHH--hcCCEEEECCC-CCCCchHHHHHhh-----cCC
Q 011163 337 IQFVFTGTNKLPSASRALVSFQEELKDGIVIFVDSYDDALLHLIF--SGSDIILCHSF-HDPLLQVPLKALK-----YGA 408 (492)
Q Consensus 337 ~~lvivG~g~~~~~~~~l~~~~~~~~~~~v~~~~~~~~~~~~~~~--~~adi~v~pS~-~E~~glv~lEAma-----~G~ 408 (492)
.+++|+.+ ++...+.+++..+..+ -.|.. ..+.++....+ ...|++++=.. .+.-|+.+++.+. ..+
T Consensus 4 ~~ilivdd--~~~~~~~l~~~L~~~g-~~v~~--~~~~~~a~~~l~~~~~dlii~D~~l~~~~g~~~~~~l~~~~~~~~~ 78 (127)
T 3i42_A 4 QQALIVED--YQAAAETFKELLEMLG-FQADY--VMSGTDALHAMSTRGYDAVFIDLNLPDTSGLALVKQLRALPMEKTS 78 (127)
T ss_dssp EEEEEECS--CHHHHHHHHHHHHHTT-EEEEE--ESSHHHHHHHHHHSCCSEEEEESBCSSSBHHHHHHHHHHSCCSSCC
T ss_pred ceEEEEcC--CHHHHHHHHHHHHHcC-CCEEE--ECCHHHHHHHHHhcCCCEEEEeCCCCCCCHHHHHHHHHhhhccCCC
Confidence 46677763 3445566666666642 23332 22333333333 34677776543 4556777776654 357
Q ss_pred ceEEEecCCCcccccccccccccceeeeeecCCCHHHHHHHHHHHhcC
Q 011163 409 APIAVTSSDIEFRHFAEFDHESTRFSRFISSTFGNISLSQALEEIKNN 456 (492)
Q Consensus 409 PvV~~~~~~gg~~e~v~~~~~~~g~~G~~~~~~~~~~l~~ai~~~~~~ 456 (492)
|+|+... ..-.+.... ...|..+|+..|.+.+.|.+++....+.
T Consensus 79 ~ii~~s~--~~~~~~~~~--~~~g~~~~l~KP~~~~~L~~~i~~~~~~ 122 (127)
T 3i42_A 79 KFVAVSG--FAKNDLGKE--ACELFDFYLEKPIDIASLEPILQSIEGH 122 (127)
T ss_dssp EEEEEEC--C-CTTCCHH--HHHHCSEEEESSCCHHHHHHHHHHHC--
T ss_pred CEEEEEC--CcchhHHHH--HHHhhHHheeCCCCHHHHHHHHHHhhcc
Confidence 7777654 222222111 1135568999999999999999987643
No 166
>3eul_A Possible nitrate/nitrite response transcriptional regulatory protein NARL (DNA-binding...; central beta strand flanked by alpha helices; 1.90A {Mycobacterium tuberculosis}
Probab=45.09 E-value=1.1e+02 Score=23.93 Aligned_cols=116 Identities=9% Similarity=-0.001 Sum_probs=61.4
Q ss_pred CcEEEEEecCCChhHHHHHHHHHHHhCCCeEEEEeccCHHHHHHHH--hcCCEEEECCC-CCCCchHHHHHhh---cCCc
Q 011163 336 GIQFVFTGTNKLPSASRALVSFQEELKDGIVIFVDSYDDALLHLIF--SGSDIILCHSF-HDPLLQVPLKALK---YGAA 409 (492)
Q Consensus 336 ~~~lvivG~g~~~~~~~~l~~~~~~~~~~~v~~~~~~~~~~~~~~~--~~adi~v~pS~-~E~~glv~lEAma---~G~P 409 (492)
..+++|+.+ ++...+.+++..+..+ ........-+.++....+ ...|++++-.. .+.-|+-+++.+. ..+|
T Consensus 15 ~~~iLivdd--~~~~~~~l~~~L~~~~-~~~~v~~~~~~~~a~~~l~~~~~dlii~d~~l~~~~g~~~~~~l~~~~~~~~ 91 (152)
T 3eul_A 15 KVRVVVGDD--HPLFREGVVRALSLSG-SVNVVGEADDGAAALELIKAHLPDVALLDYRMPGMDGAQVAAAVRSYELPTR 91 (152)
T ss_dssp CEEEEEECS--SHHHHHHHHHHHHHHS-SEEEEEEESSHHHHHHHHHHHCCSEEEEETTCSSSCHHHHHHHHHHTTCSCE
T ss_pred eEEEEEEcC--CHHHHHHHHHHHhhCC-CeEEEEEeCCHHHHHHHHHhcCCCEEEEeCCCCCCCHHHHHHHHHhcCCCCe
Confidence 456666663 2344555555555542 111111122222222222 34677766543 3455666666553 3567
Q ss_pred eEEEecCCCcccccccccccccceeeeeecCCCHHHHHHHHHHHhcCH
Q 011163 410 PIAVTSSDIEFRHFAEFDHESTRFSRFISSTFGNISLSQALEEIKNNP 457 (492)
Q Consensus 410 vV~~~~~~gg~~e~v~~~~~~~g~~G~~~~~~~~~~l~~ai~~~~~~~ 457 (492)
+|+... ..-.+.+... ...|..||+..|.+.+.|.++|..++...
T Consensus 92 ii~~s~--~~~~~~~~~~-~~~g~~~~l~Kp~~~~~l~~~i~~~~~~~ 136 (152)
T 3eul_A 92 VLLISA--HDEPAIVYQA-LQQGAAGFLLKDSTRTEIVKAVLDCAKGR 136 (152)
T ss_dssp EEEEES--CCCHHHHHHH-HHTTCSEEEETTCCHHHHHHHHHHHHHCC
T ss_pred EEEEEc--cCCHHHHHHH-HHcCCCEEEecCCCHHHHHHHHHHHHcCC
Confidence 776543 2222222111 11456789999999999999999987643
No 167
>3kl4_A SRP54, signal recognition 54 kDa protein; signal recognition particle, SRP, SRP54, FFH, signal sequenc peptide; 3.50A {Sulfolobus solfataricus} PDB: 1qzx_A 1qzw_A
Probab=44.90 E-value=1.7e+02 Score=28.43 Aligned_cols=83 Identities=14% Similarity=0.112 Sum_probs=37.3
Q ss_pred CchHHHHHhhcCCceEEEecCCC-cccccccccccccceeeeeecCCCHHHHHHHHHHHhcCHHHHHHHHHHHHhc--cC
Q 011163 396 LLQVPLKALKYGAAPIAVTSSDI-EFRHFAEFDHESTRFSRFISSTFGNISLSQALEEIKNNPLSWKRKIKDAMLQ--DF 472 (492)
Q Consensus 396 ~glv~lEAma~G~PvV~~~~~~g-g~~e~v~~~~~~~g~~G~~~~~~~~~~l~~ai~~~~~~~~~~~~~~~~a~~~--~f 472 (492)
.|.++--....|+|++...+ | ++.++-.... +....-++..+|..+|.+.++...+. +..+++.++-... .|
T Consensus 254 ~G~als~~~~~g~Pi~fig~--Ge~v~dL~~f~p--~~~~~~llg~gd~~~l~e~~~~~~~~-~~~~~~~~k~~~g~~~f 328 (433)
T 3kl4_A 254 GGGALSAVVATGATIKFIGT--GEKIDELETFNA--KRFVSRILGMGDIESILEKVKGLEEY-DKIQKKMEDVMEGKGKL 328 (433)
T ss_dssp HHHHHHHHHHHTCEEEEEEC--CSSSSCEEECCH--HHHHHHHHCSSHHHHHHHHHHHC--------------------C
T ss_pred chHHHHHHHHHCCCEEEEEC--CCChHhCccCCH--HHHHHHhcCCchHHHHHHHHHHhhhH-HHHHHHHHHHHcCCCCC
Confidence 34333333457998876555 4 3322211110 11122345567777888888877543 2233444443333 79
Q ss_pred CchhhHHHHHHH
Q 011163 473 SWDADCNDIHIS 484 (492)
Q Consensus 473 sw~~~a~~~~~~ 484 (492)
+.+.+.+|+ ..
T Consensus 329 ~~~d~~~q~-~~ 339 (433)
T 3kl4_A 329 TLRDVYAQI-IA 339 (433)
T ss_dssp CHHHHHHHH-HH
T ss_pred CHHHHHHHH-HH
Confidence 999988885 53
No 168
>3i6i_A Putative leucoanthocyanidin reductase 1; rossmann fold, short chain dehydrogenase reductase, flavonoi oxidoreductase; HET: NDP; 1.75A {Vitis vinifera} PDB: 3i5m_A 3i52_A* 3i6q_A*
Probab=44.59 E-value=17 Score=34.18 Aligned_cols=35 Identities=6% Similarity=-0.090 Sum_probs=24.3
Q ss_pred CceEEEEeeccccccccCcHHHHHhHHHHHHHHCCCeEEEEeecC
Q 011163 8 GFHIIHICTEMDPLVSIGSLASYVTGLSGALQRKGHLVEVILPKY 52 (492)
Q Consensus 8 ~mkIl~v~~~~~p~~~~GG~~~~~~~l~~~L~~~Gh~V~vi~~~~ 52 (492)
+|+|+++.. +|++| ..++++|.+.||+|.+++...
T Consensus 10 ~~~IlVtGa-------tG~iG---~~l~~~L~~~g~~V~~l~R~~ 44 (346)
T 3i6i_A 10 KGRVLIAGA-------TGFIG---QFVATASLDAHRPTYILARPG 44 (346)
T ss_dssp -CCEEEECT-------TSHHH---HHHHHHHHHTTCCEEEEECSS
T ss_pred CCeEEEECC-------CcHHH---HHHHHHHHHCCCCEEEEECCC
Confidence 367766432 35566 456778999999999998653
No 169
>3ug7_A Arsenical pump-driving ATPase; tail-anchored, membrane protein, targeting factor, ATP-bindi TRC40, ARSA, nucleotide-binding; HET: ADP; 2.90A {Methanocaldococcus jannaschii} PDB: 3ug6_A*
Probab=44.31 E-value=27 Score=33.04 Aligned_cols=41 Identities=12% Similarity=0.054 Sum_probs=29.6
Q ss_pred CCCceEEEEeeccccccccCcHHHH--HhHHHHHHHHCCCeEEEEeecC
Q 011163 6 RNGFHIIHICTEMDPLVSIGSLASY--VTGLSGALQRKGHLVEVILPKY 52 (492)
Q Consensus 6 ~~~mkIl~v~~~~~p~~~~GG~~~~--~~~l~~~L~~~Gh~V~vi~~~~ 52 (492)
.++||++.|+. ..||+|+. ..+|+..|+++|++|.++..+.
T Consensus 22 ~~~~~~i~v~s------gKGGvGKTTvA~~LA~~lA~~G~rVLlvD~D~ 64 (349)
T 3ug7_A 22 KKDGTKYIMFG------GKGGVGKTTMSAATGVYLAEKGLKVVIVSTDP 64 (349)
T ss_dssp SSCSCEEEEEE------CSSSTTHHHHHHHHHHHHHHSSCCEEEEECCT
T ss_pred ccCCCEEEEEe------CCCCccHHHHHHHHHHHHHHCCCeEEEEeCCC
Confidence 34566656554 24777765 5678899999999999998653
No 170
>2pzm_A Putative nucleotide sugar epimerase/ dehydratase; rossman fold, protein-NAD complex, protein-nucleotide comple binding protein; HET: NAD UDP; 2.00A {Bordetella bronchiseptica} PDB: 2pzl_A* 2pzk_A*
Probab=44.15 E-value=18 Score=33.66 Aligned_cols=38 Identities=21% Similarity=0.146 Sum_probs=26.1
Q ss_pred ccCCCceEEEEeeccccccccCcHHHHHhHHHHHHHHCCCeEEEEeec
Q 011163 4 WLRNGFHIIHICTEMDPLVSIGSLASYVTGLSGALQRKGHLVEVILPK 51 (492)
Q Consensus 4 ~~~~~mkIl~v~~~~~p~~~~GG~~~~~~~l~~~L~~~Gh~V~vi~~~ 51 (492)
..-+.|+|++.. ..|++| ..+++.|.++||+|.++...
T Consensus 16 ~~~~~~~vlVTG-------asG~iG---~~l~~~L~~~g~~V~~~~r~ 53 (330)
T 2pzm_A 16 PRGSHMRILITG-------GAGCLG---SNLIEHWLPQGHEILVIDNF 53 (330)
T ss_dssp STTTCCEEEEET-------TTSHHH---HHHHHHHGGGTCEEEEEECC
T ss_pred ccCCCCEEEEEC-------CCCHHH---HHHHHHHHHCCCEEEEEECC
Confidence 334457876533 246666 45678899999999988754
No 171
>3vps_A TUNA, NAD-dependent epimerase/dehydratase; tunicamycins, biosynthesis, EXO-glycal, rossman transferase; HET: UD1 NAD; 1.90A {Streptomyces chartreusis}
Probab=44.05 E-value=19 Score=33.04 Aligned_cols=28 Identities=25% Similarity=0.128 Sum_probs=20.0
Q ss_pred CcHHHHHhHHHHHHHHCCCeEEEEeecC
Q 011163 25 GSLASYVTGLSGALQRKGHLVEVILPKY 52 (492)
Q Consensus 25 GG~~~~~~~l~~~L~~~Gh~V~vi~~~~ 52 (492)
||.|-.=..+++.|.++||+|.++....
T Consensus 14 GatG~iG~~l~~~L~~~g~~V~~~~r~~ 41 (321)
T 3vps_A 14 GGAGFIGGHLARALVASGEEVTVLDDLR 41 (321)
T ss_dssp TTTSHHHHHHHHHHHHTTCCEEEECCCS
T ss_pred CCCChHHHHHHHHHHHCCCEEEEEecCC
Confidence 3334444567888999999999987643
No 172
>3eod_A Protein HNR; response regulator, phosphoprotein, two-component regulatory system, signaling protein; 1.75A {Escherichia coli K12}
Probab=44.04 E-value=1e+02 Score=23.23 Aligned_cols=113 Identities=10% Similarity=0.022 Sum_probs=60.8
Q ss_pred CcEEEEEecCCChhHHHHHHHHHHHhCCCeEEEEeccCHHHHHHHHh--cCCEEEECCC-CCCCchHHHHHhh---cCCc
Q 011163 336 GIQFVFTGTNKLPSASRALVSFQEELKDGIVIFVDSYDDALLHLIFS--GSDIILCHSF-HDPLLQVPLKALK---YGAA 409 (492)
Q Consensus 336 ~~~lvivG~g~~~~~~~~l~~~~~~~~~~~v~~~~~~~~~~~~~~~~--~adi~v~pS~-~E~~glv~lEAma---~G~P 409 (492)
..+++|+.+ ++...+.+++..+..+ ..+.. ..+.++....+. ..|++++-.. .+.-|+.+++.+. ..+|
T Consensus 7 ~~~ilivdd--~~~~~~~l~~~L~~~g-~~v~~--~~~~~~a~~~l~~~~~dlvi~d~~l~~~~g~~~~~~l~~~~~~~~ 81 (130)
T 3eod_A 7 GKQILIVED--EQVFRSLLDSWFSSLG-ATTVL--AADGVDALELLGGFTPDLMICDIAMPRMNGLKLLEHIRNRGDQTP 81 (130)
T ss_dssp TCEEEEECS--CHHHHHHHHHHHHHTT-CEEEE--ESCHHHHHHHHTTCCCSEEEECCC-----CHHHHHHHHHTTCCCC
T ss_pred CCeEEEEeC--CHHHHHHHHHHHHhCC-ceEEE--eCCHHHHHHHHhcCCCCEEEEecCCCCCCHHHHHHHHHhcCCCCC
Confidence 457778773 3445566666666653 34432 234444334443 3577777544 3455666666654 3567
Q ss_pred eEEEecCCCcccccccccccccceeeeeecCC-CHHHHHHHHHHHhcC
Q 011163 410 PIAVTSSDIEFRHFAEFDHESTRFSRFISSTF-GNISLSQALEEIKNN 456 (492)
Q Consensus 410 vV~~~~~~gg~~e~v~~~~~~~g~~G~~~~~~-~~~~l~~ai~~~~~~ 456 (492)
+|+... ..-.+.+... ...|..+++..|. +.+.|.+++..++..
T Consensus 82 ii~~t~--~~~~~~~~~~-~~~g~~~~l~KP~~~~~~l~~~i~~~l~~ 126 (130)
T 3eod_A 82 VLVISA--TENMADIAKA-LRLGVEDVLLKPVKDLNRLREMVFACLYP 126 (130)
T ss_dssp EEEEEC--CCCHHHHHHH-HHHCCSEEEESCC---CHHHHHHHHHHC-
T ss_pred EEEEEc--CCCHHHHHHH-HHcCCCEEEeCCCCcHHHHHHHHHHHhch
Confidence 777654 2222222110 1135678999998 888999999988753
No 173
>3m2p_A UDP-N-acetylglucosamine 4-epimerase; SGXNY, 11155J, isomerase, structural genomics, PSI-2, protein structure initiative; HET: UDP; 2.95A {Bacillus cereus}
Probab=43.85 E-value=20 Score=32.88 Aligned_cols=27 Identities=7% Similarity=0.102 Sum_probs=20.2
Q ss_pred CcHHHHHhHHHHHHHHCCCeEEEEeec
Q 011163 25 GSLASYVTGLSGALQRKGHLVEVILPK 51 (492)
Q Consensus 25 GG~~~~~~~l~~~L~~~Gh~V~vi~~~ 51 (492)
||.|-.=..|++.|.++|++|.+++..
T Consensus 9 GatG~iG~~l~~~L~~~g~~V~~~~r~ 35 (311)
T 3m2p_A 9 GGTGFLGQYVVESIKNDGNTPIILTRS 35 (311)
T ss_dssp TTTSHHHHHHHHHHHHTTCEEEEEESC
T ss_pred CCCcHHHHHHHHHHHhCCCEEEEEeCC
Confidence 444444456788899999999998865
No 174
>2qyt_A 2-dehydropantoate 2-reductase; APC81190, porphyromonas gingi W83, structural genomics, PSI-2; HET: MSE; 2.15A {Porphyromonas gingivalis}
Probab=43.83 E-value=15 Score=34.02 Aligned_cols=36 Identities=17% Similarity=0.114 Sum_probs=24.8
Q ss_pred ccCCCceEEEEeeccccccccCcHHHHHhHHHHHHHHC-----C-CeEEEEee
Q 011163 4 WLRNGFHIIHICTEMDPLVSIGSLASYVTGLSGALQRK-----G-HLVEVILP 50 (492)
Q Consensus 4 ~~~~~mkIl~v~~~~~p~~~~GG~~~~~~~l~~~L~~~-----G-h~V~vi~~ 50 (492)
+++++|||++|.. |.+|. .++..|.+. | |+|+++..
T Consensus 4 m~~~~m~I~iiG~--------G~mG~---~~a~~L~~~~~~~~g~~~V~~~~r 45 (317)
T 2qyt_A 4 MNQQPIKIAVFGL--------GGVGG---YYGAMLALRAAATDGLLEVSWIAR 45 (317)
T ss_dssp ---CCEEEEEECC--------SHHHH---HHHHHHHHHHHHTTSSEEEEEECC
T ss_pred CCCCCCEEEEECc--------CHHHH---HHHHHHHhCccccCCCCCEEEEEc
Confidence 4566799998764 66664 456777777 9 99998864
No 175
>3ea0_A ATPase, para family; alpha-beta-alpha sandwich, structural genomics, PSI-2, prote structure initiative; HET: ATP; 2.20A {Chlorobium tepidum}
Probab=43.68 E-value=18 Score=31.81 Aligned_cols=39 Identities=13% Similarity=0.081 Sum_probs=28.4
Q ss_pred CCceEEEEeeccccccccCcHH--HHHhHHHHHHHHC-CCeEEEEeec
Q 011163 7 NGFHIIHICTEMDPLVSIGSLA--SYVTGLSGALQRK-GHLVEVILPK 51 (492)
Q Consensus 7 ~~mkIl~v~~~~~p~~~~GG~~--~~~~~l~~~L~~~-Gh~V~vi~~~ 51 (492)
+.|||+.|+.. .||+| +.+.+|+.+|+++ |++|.++=.+
T Consensus 2 ~~~~vI~v~s~------kGGvGKTt~a~~LA~~la~~~g~~VlliD~D 43 (245)
T 3ea0_A 2 NAKRVFGFVSA------KGGDGGSCIAANFAFALSQEPDIHVLAVDIS 43 (245)
T ss_dssp -CCEEEEEEES------STTSSHHHHHHHHHHHHTTSTTCCEEEEECC
T ss_pred CCCeEEEEECC------CCCcchHHHHHHHHHHHHhCcCCCEEEEECC
Confidence 35787777752 36665 4566799999998 9999998654
No 176
>3t6k_A Response regulator receiver; flavodoxin-like, structural genomics, joint center for struc genomics, JCSG, protein structure initiative; HET: MSE; 1.86A {Chloroflexus aurantiacus} SCOP: c.23.1.0
Probab=43.62 E-value=1.1e+02 Score=23.48 Aligned_cols=112 Identities=8% Similarity=-0.044 Sum_probs=62.6
Q ss_pred cEEEEEecCCChhHHHHHHHHHHHhCCCeEEEEeccCHHHHHHHH--hcCCEEEECCC-CCCCchHHHHHhh-----cCC
Q 011163 337 IQFVFTGTNKLPSASRALVSFQEELKDGIVIFVDSYDDALLHLIF--SGSDIILCHSF-HDPLLQVPLKALK-----YGA 408 (492)
Q Consensus 337 ~~lvivG~g~~~~~~~~l~~~~~~~~~~~v~~~~~~~~~~~~~~~--~~adi~v~pS~-~E~~glv~lEAma-----~G~ 408 (492)
.+++|+.+ ++...+.++...+..+ -.|.. ..+.++....+ ...|++++=.. -+.-|+-+++.+. ..+
T Consensus 5 ~~iLivdd--~~~~~~~l~~~L~~~g-~~v~~--~~~~~~al~~~~~~~~dlvl~D~~lp~~~g~~~~~~lr~~~~~~~~ 79 (136)
T 3t6k_A 5 HTLLIVDD--DDTVAEMLELVLRGAG-YEVRR--AASGEEALQQIYKNLPDALICDVLLPGIDGYTLCKRVRQHPLTKTL 79 (136)
T ss_dssp CEEEEECS--CHHHHHHHHHHHHHTT-CEEEE--ESSHHHHHHHHHHSCCSEEEEESCCSSSCHHHHHHHHHHSGGGTTC
T ss_pred CEEEEEeC--CHHHHHHHHHHHHHCC-CEEEE--eCCHHHHHHHHHhCCCCEEEEeCCCCCCCHHHHHHHHHcCCCcCCc
Confidence 46667663 2445556666655542 33432 22333322332 34588776543 3455676766653 257
Q ss_pred ceEEEecCCCcccccccccccccceeeeeecCCCHHHHHHHHHHHhcC
Q 011163 409 APIAVTSSDIEFRHFAEFDHESTRFSRFISSTFGNISLSQALEEIKNN 456 (492)
Q Consensus 409 PvV~~~~~~gg~~e~v~~~~~~~g~~G~~~~~~~~~~l~~ai~~~~~~ 456 (492)
|+|+... .+-.+..... ...|..+|+..|.+.+.|..++..++..
T Consensus 80 pii~~t~--~~~~~~~~~~-~~~ga~~~l~KP~~~~~L~~~i~~~l~~ 124 (136)
T 3t6k_A 80 PILMLTA--QGDISAKIAG-FEAGANDYLAKPFEPQELVYRVKNILAR 124 (136)
T ss_dssp CEEEEEC--TTCHHHHHHH-HHHTCSEEEETTCCHHHHHHHHHHHHHC
T ss_pred cEEEEec--CCCHHHHHHH-HhcCcceEEeCCCCHHHHHHHHHHHHhc
Confidence 7776554 2222222110 1135678999999999999999988753
No 177
>3cio_A ETK, tyrosine-protein kinase ETK; WZC, escherichia coli tyrosine kinase domain, signaling protein, transferase, inner membrane, membrane; 2.50A {Escherichia coli}
Probab=43.60 E-value=25 Score=32.41 Aligned_cols=41 Identities=12% Similarity=0.075 Sum_probs=30.7
Q ss_pred CCCceEEEEeeccccccccC--cHHHHHhHHHHHHHHCCCeEEEEeecC
Q 011163 6 RNGFHIIHICTEMDPLVSIG--SLASYVTGLSGALQRKGHLVEVILPKY 52 (492)
Q Consensus 6 ~~~mkIl~v~~~~~p~~~~G--G~~~~~~~l~~~L~~~Gh~V~vi~~~~ 52 (492)
++++|++.|+.. .| |-.+.+.+|+..|++.|.+|.+|-.+.
T Consensus 101 ~~~~kvI~vts~------kgG~GKTtva~nLA~~lA~~G~rVLLID~D~ 143 (299)
T 3cio_A 101 ETENNILMITGA------TPDSGKTFVSSTLAAVIAQSDQKVLFIDADL 143 (299)
T ss_dssp SCSCCEEEEEES------SSSSCHHHHHHHHHHHHHHTTCCEEEEECCT
T ss_pred CCCCeEEEEECC------CCCCChHHHHHHHHHHHHhCCCcEEEEECCC
Confidence 445788887762 24 455677899999999999999986543
No 178
>3dhn_A NAD-dependent epimerase/dehydratase; reductase, PF01370, Q89Z24_bactn, NESG, BTR310, structural genomics, PSI-2; 2.00A {Bacteroides thetaiotaomicron}
Probab=43.53 E-value=23 Score=30.63 Aligned_cols=27 Identities=15% Similarity=0.188 Sum_probs=20.2
Q ss_pred CcHHHHHhHHHHHHHHCCCeEEEEeec
Q 011163 25 GSLASYVTGLSGALQRKGHLVEVILPK 51 (492)
Q Consensus 25 GG~~~~~~~l~~~L~~~Gh~V~vi~~~ 51 (492)
||.+-.=..+++.|.++||+|.++...
T Consensus 11 GatG~iG~~l~~~L~~~g~~V~~~~r~ 37 (227)
T 3dhn_A 11 GASGFVGSALLNEALNRGFEVTAVVRH 37 (227)
T ss_dssp TCCHHHHHHHHHHHHTTTCEEEEECSC
T ss_pred cCCchHHHHHHHHHHHCCCEEEEEEcC
Confidence 444444467788899999999998764
No 179
>3guy_A Short-chain dehydrogenase/reductase SDR; structural genomics, oxidoreductase, PSI-2, protein structur initiative; 1.90A {Vibrio parahaemolyticus}
Probab=43.46 E-value=19 Score=31.53 Aligned_cols=34 Identities=15% Similarity=0.165 Sum_probs=24.1
Q ss_pred ceEEEEeeccccccccCcHHHHHhHHHHHHHHCCCeEEEEeec
Q 011163 9 FHIIHICTEMDPLVSIGSLASYVTGLSGALQRKGHLVEVILPK 51 (492)
Q Consensus 9 mkIl~v~~~~~p~~~~GG~~~~~~~l~~~L~~~Gh~V~vi~~~ 51 (492)
||+++|+- ..||+| ..+++.|.++|++|.++...
T Consensus 1 Mk~vlVTG------as~gIG---~~~a~~l~~~G~~V~~~~r~ 34 (230)
T 3guy_A 1 MSLIVITG------ASSGLG---AELAKLYDAEGKATYLTGRS 34 (230)
T ss_dssp --CEEEES------TTSHHH---HHHHHHHHHTTCCEEEEESC
T ss_pred CCEEEEec------CCchHH---HHHHHHHHHCCCEEEEEeCC
Confidence 67777774 347777 57788999999998887643
No 180
>1dcf_A ETR1 protein; beta-alpha five sandwich, transferase; 2.50A {Arabidopsis thaliana} SCOP: c.23.1.2
Probab=43.30 E-value=1.1e+02 Score=23.34 Aligned_cols=113 Identities=8% Similarity=0.005 Sum_probs=59.4
Q ss_pred CcEEEEEecCCChhHHHHHHHHHHHhCCCeEEEEeccCHHHHHHHHh-cCCEEEECCC-CCCCchHHHHHhh--c-----
Q 011163 336 GIQFVFTGTNKLPSASRALVSFQEELKDGIVIFVDSYDDALLHLIFS-GSDIILCHSF-HDPLLQVPLKALK--Y----- 406 (492)
Q Consensus 336 ~~~lvivG~g~~~~~~~~l~~~~~~~~~~~v~~~~~~~~~~~~~~~~-~adi~v~pS~-~E~~glv~lEAma--~----- 406 (492)
..+++|+.+. +...+.++...+..+ -.|.. ..+.++....+. ..|++++=-. -..-|+-+++.+. .
T Consensus 7 ~~~ILivdd~--~~~~~~l~~~L~~~g-~~v~~--~~~~~~a~~~~~~~~dlvllD~~lp~~~g~~~~~~l~~~~~~~~~ 81 (136)
T 1dcf_A 7 GLKVLVMDEN--GVSRMVTKGLLVHLG-CEVTT--VSSNEECLRVVSHEHKVVFMDVCMPGVENYQIALRIHEKFTKQRH 81 (136)
T ss_dssp TCEEEEECSC--HHHHHHHHHHHHHTT-CEEEE--ESSHHHHHHHCCTTCSEEEEECCSSTTTTTHHHHHHHHHHC-CCS
T ss_pred CCeEEEEeCC--HHHHHHHHHHHHHcC-CeEEE--eCCHHHHHHHHhccCCEEEEeCCCCCCcHHHHHHHHHHhhhhccC
Confidence 3577777643 444555666655542 34432 233333333332 2388776433 2334565666653 1
Q ss_pred CCc-eEEEecCCCcccccccccccccceeeeeecCCCHHHHHHHHHHHhcC
Q 011163 407 GAA-PIAVTSSDIEFRHFAEFDHESTRFSRFISSTFGNISLSQALEEIKNN 456 (492)
Q Consensus 407 G~P-vV~~~~~~gg~~e~v~~~~~~~g~~G~~~~~~~~~~l~~ai~~~~~~ 456 (492)
..| +|+... ..-.+..... ...|..||+..|.+.+.|.+++..++..
T Consensus 82 ~~~~ii~~s~--~~~~~~~~~~-~~~ga~~~l~KP~~~~~L~~~l~~~~~~ 129 (136)
T 1dcf_A 82 QRPLLVALSG--NTDKSTKEKC-MSFGLDGVLLKPVSLDNIRDVLSDLLEP 129 (136)
T ss_dssp CCCEEEEEES--CCSHHHHHHH-HHTTCCEEEESSCCHHHHHHHHHHHHSC
T ss_pred CCceEEEEeC--CCCHHHHHHH-HHcCCCeEEECCCCHHHHHHHHHHHhch
Confidence 234 443322 1112222110 1146678999999999999999888654
No 181
>3dff_A Teicoplanin pseudoaglycone deacetylases ORF2; lipoglycopeptide, zinc dependen hydrolase; HET: MSE PG4; 1.60A {Actinoplanes teichomyceticus} PDB: 2x9l_A* 3dfk_A* 3dfm_A 2xad_A*
Probab=43.11 E-value=35 Score=30.97 Aligned_cols=41 Identities=10% Similarity=-0.080 Sum_probs=28.7
Q ss_pred CceEEEEeeccccccccCcHHHHHhHHHHHHHHCCCeEEEEeecCCC
Q 011163 8 GFHIIHICTEMDPLVSIGSLASYVTGLSGALQRKGHLVEVILPKYAC 54 (492)
Q Consensus 8 ~mkIl~v~~~~~p~~~~GG~~~~~~~l~~~L~~~Gh~V~vi~~~~~~ 54 (492)
.++||+|++ +|- -....+..+...+.+.|++|.|++...+.
T Consensus 7 ~~rvLvv~a--HPD----De~lg~GGtia~~~~~G~~V~vv~~T~G~ 47 (273)
T 3dff_A 7 ATRLLAISP--HLD----DAVLSFGAGLAQAAQDGANVLVYTVFAGA 47 (273)
T ss_dssp -CEEEEEES--STT----HHHHHHHHHHHHHHHTTCEEEEEETTCCC
T ss_pred CCCEEEEEe--CCC----hHHHhHHHHHHHHHHCCCcEEEEEEeCCC
Confidence 689999998 563 23334455566677899999999876554
No 182
>2r85_A PURP protein PF1517; ATP-grAsp superfamily, unknown function; HET: AMP; 1.70A {Pyrococcus furiosus} SCOP: c.30.1.8 d.142.1.9 PDB: 2r84_A* 2r86_A* 2r87_A*
Probab=42.97 E-value=19 Score=33.57 Aligned_cols=32 Identities=6% Similarity=-0.008 Sum_probs=26.1
Q ss_pred CceEEEEeeccccccccCcHHHHHhHHHHHHHHCCCeEEEEeec
Q 011163 8 GFHIIHICTEMDPLVSIGSLASYVTGLSGALQRKGHLVEVILPK 51 (492)
Q Consensus 8 ~mkIl~v~~~~~p~~~~GG~~~~~~~l~~~L~~~Gh~V~vi~~~ 51 (492)
+|||+++.. | ....+++++.++|++|.++.+.
T Consensus 2 ~m~Ililg~---------g---~~~~l~~a~~~~G~~v~~~~~~ 33 (334)
T 2r85_A 2 KVRIATYAS---------H---SALQILKGAKDEGFETIAFGSS 33 (334)
T ss_dssp CSEEEEESS---------T---THHHHHHHHHHTTCCEEEESCG
T ss_pred ceEEEEECC---------h---hHHHHHHHHHhCCCEEEEEECC
Confidence 489988764 3 5678999999999999998865
No 183
>3c3m_A Response regulator receiver protein; structural genomics, unknown function, PSI-2, protein struct initiative; HET: MSE; 1.70A {Methanoculleus marisnigri JR1}
Probab=42.93 E-value=1.1e+02 Score=23.41 Aligned_cols=113 Identities=12% Similarity=0.071 Sum_probs=62.5
Q ss_pred cEEEEEecCCChhHHHHHHHHHHHhCCCeEEEEeccCHHHHHHHHh--cCCEEEECCC-CCCCchHHHHHhhc-----CC
Q 011163 337 IQFVFTGTNKLPSASRALVSFQEELKDGIVIFVDSYDDALLHLIFS--GSDIILCHSF-HDPLLQVPLKALKY-----GA 408 (492)
Q Consensus 337 ~~lvivG~g~~~~~~~~l~~~~~~~~~~~v~~~~~~~~~~~~~~~~--~adi~v~pS~-~E~~glv~lEAma~-----G~ 408 (492)
.+++|+.+ ++...+.++...+..+ -.+.. ..+.++....+. ..|++++=-. -+.-|+.+++.+.. .+
T Consensus 4 ~~ILivdd--~~~~~~~l~~~L~~~g-~~v~~--~~~~~~al~~l~~~~~dlvi~D~~l~~~~g~~~~~~l~~~~~~~~~ 78 (138)
T 3c3m_A 4 YTILVVDD--SPMIVDVFVTMLERGG-YRPIT--AFSGEECLEALNATPPDLVLLDIMMEPMDGWETLERIKTDPATRDI 78 (138)
T ss_dssp CEEEEECS--CHHHHHHHHHHHHHTT-CEEEE--ESSHHHHHHHHHHSCCSEEEEESCCSSSCHHHHHHHHHHSTTTTTS
T ss_pred ceEEEEeC--CHHHHHHHHHHHHHcC-ceEEE--eCCHHHHHHHHhccCCCEEEEeCCCCCCCHHHHHHHHHcCcccCCC
Confidence 36667763 3445556666655542 33332 223333323333 3588776543 34457777777642 56
Q ss_pred ceEEEecCCCcccccccccccccceeeeeecCCCHHHHHHHHHHHhcCH
Q 011163 409 APIAVTSSDIEFRHFAEFDHESTRFSRFISSTFGNISLSQALEEIKNNP 457 (492)
Q Consensus 409 PvV~~~~~~gg~~e~v~~~~~~~g~~G~~~~~~~~~~l~~ai~~~~~~~ 457 (492)
|+|+... .. .........+.|..+|+..|.+.+.|.++|..++...
T Consensus 79 ~ii~ls~--~~-~~~~~~~~~~~~~~~~l~KP~~~~~L~~~i~~~~~~~ 124 (138)
T 3c3m_A 79 PVLMLTA--KP-LTPEEANEYGSYIEDYILKPTTHHQLYEAIEHVLARR 124 (138)
T ss_dssp CEEEEES--SC-CCHHHHHHTTTTCSEEEECCCHHHHHHHHHHHHHSCC
T ss_pred CEEEEEC--CC-ChHHHHHHhhcCHhheEeCCCCHHHHHHHHHHHHHHh
Confidence 7776543 21 1111111122344689999999999999999887543
No 184
>4hb9_A Similarities with probable monooxygenase; flavin, structural genomics, NEW YORK structural genomics RE consortium, nysgrc, PSI; HET: MSE FAD; 1.93A {Photorhabdus luminescens}
Probab=42.79 E-value=24 Score=33.69 Aligned_cols=30 Identities=23% Similarity=0.323 Sum_probs=22.5
Q ss_pred CceEEEEeeccccccccCcHHHHHhHHHHHHHHCCCeEEEE
Q 011163 8 GFHIIHICTEMDPLVSIGSLASYVTGLSGALQRKGHLVEVI 48 (492)
Q Consensus 8 ~mkIl~v~~~~~p~~~~GG~~~~~~~l~~~L~~~Gh~V~vi 48 (492)
.|||++|.. |.. =..+|..|+++|++|+|+
T Consensus 1 sm~V~IVGa---------Gpa--Gl~~A~~L~~~G~~v~v~ 30 (412)
T 4hb9_A 1 SMHVGIIGA---------GIG--GTCLAHGLRKHGIKVTIY 30 (412)
T ss_dssp CCEEEEECC---------SHH--HHHHHHHHHHTTCEEEEE
T ss_pred CCEEEEECc---------CHH--HHHHHHHHHhCCCCEEEE
Confidence 499999874 222 244677899999999998
No 185
>2rh8_A Anthocyanidin reductase; flavonoids, rossmann fold, short chain dehydrogenase/reductase, oxidoreductase; 2.22A {Vitis vinifera} PDB: 3hfs_A
Probab=42.79 E-value=23 Score=32.94 Aligned_cols=25 Identities=28% Similarity=0.276 Sum_probs=18.7
Q ss_pred cCcHHHHHhHHHHHHHHCCCeEEEEeec
Q 011163 24 IGSLASYVTGLSGALQRKGHLVEVILPK 51 (492)
Q Consensus 24 ~GG~~~~~~~l~~~L~~~Gh~V~vi~~~ 51 (492)
.|++| ..|++.|.++||+|.++...
T Consensus 18 tGfIG---~~l~~~Ll~~G~~V~~~~r~ 42 (338)
T 2rh8_A 18 TGFVA---SLLVKLLLQKGYAVNTTVRD 42 (338)
T ss_dssp TSHHH---HHHHHHHHHTTCEEEEEESC
T ss_pred chHHH---HHHHHHHHHCCCEEEEEEcC
Confidence 46666 46778899999999877643
No 186
>2qxy_A Response regulator; regulation of transcription, NYSGXRC, protein structure initiative II (PSI II), structural genomics; 1.95A {Thermotoga maritima}
Probab=42.78 E-value=1.1e+02 Score=23.56 Aligned_cols=114 Identities=9% Similarity=0.027 Sum_probs=60.2
Q ss_pred CcEEEEEecCCChhHHHHHHHHHHHhCCCeEEEEeccCHHHHHHHHh--cCCEEEECCCCCCCchHHHHHhh---cCCce
Q 011163 336 GIQFVFTGTNKLPSASRALVSFQEELKDGIVIFVDSYDDALLHLIFS--GSDIILCHSFHDPLLQVPLKALK---YGAAP 410 (492)
Q Consensus 336 ~~~lvivG~g~~~~~~~~l~~~~~~~~~~~v~~~~~~~~~~~~~~~~--~adi~v~pS~~E~~glv~lEAma---~G~Pv 410 (492)
..+++|+.+ ++...+.++...+..+ -.|.. ..+.++....+. ..|++++-...+.-|+-+++.+. ..+|+
T Consensus 4 ~~~iLivdd--~~~~~~~l~~~L~~~g-~~v~~--~~~~~~a~~~l~~~~~dlvi~d~~~~~~g~~~~~~l~~~~~~~pi 78 (142)
T 2qxy_A 4 TPTVMVVDE--SRITFLAVKNALEKDG-FNVIW--AKNEQEAFTFLRREKIDLVFVDVFEGEESLNLIRRIREEFPDTKV 78 (142)
T ss_dssp CCEEEEECS--CHHHHHHHHHHHGGGT-CEEEE--ESSHHHHHHHHTTSCCSEEEEECTTTHHHHHHHHHHHHHCTTCEE
T ss_pred CCeEEEEeC--CHHHHHHHHHHHHhCC-CEEEE--ECCHHHHHHHHhccCCCEEEEeCCCCCcHHHHHHHHHHHCCCCCE
Confidence 346677763 2344555555555442 34432 223333333333 35777765411223444444442 36777
Q ss_pred EEEecCCCcccccccccccccceeeeeecCCCHHHHHHHHHHHhcCH
Q 011163 411 IAVTSSDIEFRHFAEFDHESTRFSRFISSTFGNISLSQALEEIKNNP 457 (492)
Q Consensus 411 V~~~~~~gg~~e~v~~~~~~~g~~G~~~~~~~~~~l~~ai~~~~~~~ 457 (492)
|+... ..-.+.+... ...|..+++..|.+.+.|.++|..++...
T Consensus 79 i~ls~--~~~~~~~~~~-~~~g~~~~l~kP~~~~~l~~~i~~~~~~~ 122 (142)
T 2qxy_A 79 AVLSA--YVDKDLIINS-VKAGAVDYILKPFRLDYLLERVKKIISST 122 (142)
T ss_dssp EEEES--CCCHHHHHHH-HHHTCSCEEESSCCHHHHHHHHHHHHHC-
T ss_pred EEEEC--CCCHHHHHHH-HHCCcceeEeCCCCHHHHHHHHHHHHhhc
Confidence 77643 2222222110 11355689999999999999999987543
No 187
>3fkq_A NTRC-like two-domain protein; RER070207001320, structural GE joint center for structural genomics, JCSG, protein structu initiative, PSI-2; HET: ATP 2PE; 2.10A {Eubacterium rectale}
Probab=42.73 E-value=22 Score=34.00 Aligned_cols=41 Identities=10% Similarity=0.067 Sum_probs=30.5
Q ss_pred cCCCceEEEEeeccccccccCcHH--HHHhHHHHHHHHCCCeEEEEeec
Q 011163 5 LRNGFHIIHICTEMDPLVSIGSLA--SYVTGLSGALQRKGHLVEVILPK 51 (492)
Q Consensus 5 ~~~~mkIl~v~~~~~p~~~~GG~~--~~~~~l~~~L~~~Gh~V~vi~~~ 51 (492)
..++||++.|+. ..||+| +.+.+||.+|+++|.+|.++-.+
T Consensus 139 ~~~~~kvIav~s------~KGGvGKTT~a~nLA~~La~~g~rVlliD~D 181 (373)
T 3fkq_A 139 ENDKSSVVIFTS------PCGGVGTSTVAAACAIAHANMGKKVFYLNIE 181 (373)
T ss_dssp CTTSCEEEEEEC------SSTTSSHHHHHHHHHHHHHHHTCCEEEEECC
T ss_pred cCCCceEEEEEC------CCCCChHHHHHHHHHHHHHhCCCCEEEEECC
Confidence 345688877775 236665 45667999999999999998765
No 188
>1hyq_A MIND, cell division inhibitor (MIND-1); MINC, FTSZ, bacterial cell division, cell cycle; 2.60A {Archaeoglobus fulgidus} SCOP: c.37.1.10
Probab=42.40 E-value=24 Score=31.45 Aligned_cols=37 Identities=22% Similarity=0.323 Sum_probs=27.1
Q ss_pred ceEEEEeeccccccccCcH--HHHHhHHHHHHHHCCCeEEEEeec
Q 011163 9 FHIIHICTEMDPLVSIGSL--ASYVTGLSGALQRKGHLVEVILPK 51 (492)
Q Consensus 9 mkIl~v~~~~~p~~~~GG~--~~~~~~l~~~L~~~Gh~V~vi~~~ 51 (492)
||++.|+.. .||+ .+.+.+|+.+|+++|++|.++=.+
T Consensus 2 ~~~I~v~s~------kgGvGKTt~a~~LA~~la~~g~~VlliD~D 40 (263)
T 1hyq_A 2 VRTITVASG------KGGTGKTTITANLGVALAQLGHDVTIVDAD 40 (263)
T ss_dssp CEEEEEEES------SSCSCHHHHHHHHHHHHHHTTCCEEEEECC
T ss_pred CeEEEEECC------CCCCCHHHHHHHHHHHHHhCCCcEEEEECC
Confidence 466666542 2555 466788999999999999998654
No 189
>3ego_A Probable 2-dehydropantoate 2-reductase; structural genomics, PANE, unknown function, cytoplasm, NADP, oxidoreductase; 1.90A {Bacillus subtilis}
Probab=42.33 E-value=22 Score=32.95 Aligned_cols=32 Identities=25% Similarity=0.148 Sum_probs=24.6
Q ss_pred CceEEEEeeccccccccCcHHHHHhHHHHHHHHCCCeEEEEeec
Q 011163 8 GFHIIHICTEMDPLVSIGSLASYVTGLSGALQRKGHLVEVILPK 51 (492)
Q Consensus 8 ~mkIl~v~~~~~p~~~~GG~~~~~~~l~~~L~~~Gh~V~vi~~~ 51 (492)
.|||++|.. |.+|.+ ++..|. .||+|+++...
T Consensus 2 ~mkI~IiGa--------Ga~G~~---~a~~L~-~g~~V~~~~r~ 33 (307)
T 3ego_A 2 SLKIGIIGG--------GSVGLL---CAYYLS-LYHDVTVVTRR 33 (307)
T ss_dssp CCEEEEECC--------SHHHHH---HHHHHH-TTSEEEEECSC
T ss_pred CCEEEEECC--------CHHHHH---HHHHHh-cCCceEEEECC
Confidence 489999875 777764 466677 89999998864
No 190
>2acv_A Triterpene UDP-glucosyl transferase UGT71G1; glycosyltransferase; HET: UDP; 2.00A {Medicago truncatula} SCOP: c.87.1.10 PDB: 2acw_A*
Probab=42.27 E-value=17 Score=35.96 Aligned_cols=41 Identities=15% Similarity=0.134 Sum_probs=31.0
Q ss_pred CCceEEEEeeccccccccCcHHHHHhHHHHHHHHC--CCeEEEEeecCC
Q 011163 7 NGFHIIHICTEMDPLVSIGSLASYVTGLSGALQRK--GHLVEVILPKYA 53 (492)
Q Consensus 7 ~~mkIl~v~~~~~p~~~~GG~~~~~~~l~~~L~~~--Gh~V~vi~~~~~ 53 (492)
+++||+++.. | ..|=-.=+.+|++.|+++ ||+|+++++...
T Consensus 8 ~~~~vv~~p~---p---~~GHi~P~l~La~~L~~r~pG~~Vt~v~t~~~ 50 (463)
T 2acv_A 8 KNSELIFIPA---P---GIGHLASALEFAKLLTNHDKNLYITVFCIKFP 50 (463)
T ss_dssp HCEEEEEECC---S---STTTHHHHHHHHHHHHHTCTTEEEEEEECCCT
T ss_pred CCCEEEEEcC---c---ccchHHHHHHHHHHHHhcCCCcEEEEEEcCCc
Confidence 4589888652 3 245556678899999999 999999987643
No 191
>2xj4_A MIPZ; replication, cell division, ATPase, WACA; 1.60A {Caulobacter vibrioides} PDB: 2xj9_A* 2xit_A
Probab=42.20 E-value=24 Score=32.17 Aligned_cols=37 Identities=24% Similarity=0.196 Sum_probs=27.3
Q ss_pred ceEEEEeeccccccccCcHH--HHHhHHHHHHHHCCCeEEEEeec
Q 011163 9 FHIIHICTEMDPLVSIGSLA--SYVTGLSGALQRKGHLVEVILPK 51 (492)
Q Consensus 9 mkIl~v~~~~~p~~~~GG~~--~~~~~l~~~L~~~Gh~V~vi~~~ 51 (492)
|||+.|+. ..||+| +.+.+|+.+|+++|.+|.++=.+
T Consensus 4 ~kvI~v~s------~KGGvGKTT~a~nLA~~La~~G~~VlliD~D 42 (286)
T 2xj4_A 4 TRVIVVGN------EKGGAGKSTIAVHLVTALLYGGAKVAVIDLD 42 (286)
T ss_dssp CEEEEECC------SSSCTTHHHHHHHHHHHHHHTTCCEEEEECC
T ss_pred CeEEEEEc------CCCCCCHHHHHHHHHHHHHHCCCcEEEEECC
Confidence 46666664 236666 46778999999999999888554
No 192
>2q1s_A Putative nucleotide sugar epimerase/ dehydratase; rossman fold, protein-NADH complex, sugar binding protein; HET: NAI; 1.50A {Bordetella bronchiseptica} PDB: 2pzj_A* 2q1t_A* 2q1u_A*
Probab=42.07 E-value=25 Score=33.41 Aligned_cols=25 Identities=24% Similarity=0.251 Sum_probs=19.0
Q ss_pred cCcHHHHHhHHHHHHHHCC-CeEEEEeec
Q 011163 24 IGSLASYVTGLSGALQRKG-HLVEVILPK 51 (492)
Q Consensus 24 ~GG~~~~~~~l~~~L~~~G-h~V~vi~~~ 51 (492)
.|++| ..+++.|.++| ++|.++...
T Consensus 41 tG~iG---~~l~~~L~~~g~~~V~~~~r~ 66 (377)
T 2q1s_A 41 AGFVG---SNLVKRLLELGVNQVHVVDNL 66 (377)
T ss_dssp TSHHH---HHHHHHHHHTTCSEEEEECCC
T ss_pred ccHHH---HHHHHHHHHcCCceEEEEECC
Confidence 35555 56778899999 999988754
No 193
>3f6c_A Positive transcription regulator EVGA; structural genomics, PSI-2, protein structure initiative, PO transcription regulator EVGA; 1.45A {Escherichia coli k-12}
Probab=42.07 E-value=1.1e+02 Score=23.11 Aligned_cols=114 Identities=16% Similarity=0.128 Sum_probs=62.0
Q ss_pred cEEEEEecCCChhHHHHHHHHHHHhCCCeEE-EEeccCHHHHHHHHhcCCEEEECCC-CCCCchHHHHHhh---cCCceE
Q 011163 337 IQFVFTGTNKLPSASRALVSFQEELKDGIVI-FVDSYDDALLHLIFSGSDIILCHSF-HDPLLQVPLKALK---YGAAPI 411 (492)
Q Consensus 337 ~~lvivG~g~~~~~~~~l~~~~~~~~~~~v~-~~~~~~~~~~~~~~~~adi~v~pS~-~E~~glv~lEAma---~G~PvV 411 (492)
.+++|+.+ ++...+.++...++.+ -.+. ......+.....--...|++++-.. .+.-|+.+++.+. ..+|+|
T Consensus 2 ~~ilivdd--~~~~~~~l~~~L~~~g-~~v~~~~~~~~~a~~~~~~~~~dlii~d~~l~~~~g~~~~~~l~~~~~~~~ii 78 (134)
T 3f6c_A 2 LNAIIIDD--HPLAIAAIRNLLIKND-IEILAELTEGGSAVQRVETLKPDIVIIDVDIPGVNGIQVLETLRKRQYSGIII 78 (134)
T ss_dssp EEEEEECC--CHHHHHHHHHHHHHTT-EEEEEEESSSTTHHHHHHHHCCSEEEEETTCSSSCHHHHHHHHHHTTCCSEEE
T ss_pred eEEEEEcC--CHHHHHHHHHHHhhCC-cEEEEEcCCHHHHHHHHHhcCCCEEEEecCCCCCChHHHHHHHHhcCCCCeEE
Confidence 46677763 3455566666666652 2332 2222222211111245688777544 3455666666554 356777
Q ss_pred EEecCCCcccccccccccccceeeeeecCCCHHHHHHHHHHHhcC
Q 011163 412 AVTSSDIEFRHFAEFDHESTRFSRFISSTFGNISLSQALEEIKNN 456 (492)
Q Consensus 412 ~~~~~~gg~~e~v~~~~~~~g~~G~~~~~~~~~~l~~ai~~~~~~ 456 (492)
+... ..-.+..... ...|..+++..|.+.+.|.++|+.+++.
T Consensus 79 ~~s~--~~~~~~~~~~-~~~g~~~~l~kp~~~~~l~~~i~~~~~~ 120 (134)
T 3f6c_A 79 IVSA--KNDHFYGKHC-ADAGANGFVSKKEGMNNIIAAIEAAKNG 120 (134)
T ss_dssp EEEC--C---CTHHHH-HHTTCSEEEEGGGCTHHHHHHHHHHHTT
T ss_pred EEeC--CCChHHHHHH-HHhCCCEEEeCCCCHHHHHHHHHHHHCC
Confidence 6543 2222222110 1145678999999999999999988753
No 194
>1vl0_A DTDP-4-dehydrorhamnose reductase, RFBD ortholog; structural joint center for structural genomics, JCSG, protein structu initiative; HET: NAI UNL; 2.05A {Clostridium acetobutylicum} SCOP: c.2.1.2
Probab=42.05 E-value=13 Score=33.73 Aligned_cols=39 Identities=13% Similarity=0.042 Sum_probs=24.0
Q ss_pred cccCCCceEEEEeeccccccccCcHHHHHhHHHHHHHHCCCeEEEEeec
Q 011163 3 KWLRNGFHIIHICTEMDPLVSIGSLASYVTGLSGALQRKGHLVEVILPK 51 (492)
Q Consensus 3 ~~~~~~mkIl~v~~~~~p~~~~GG~~~~~~~l~~~L~~~Gh~V~vi~~~ 51 (492)
|.+.+.|||++. ||.|-.=..+++.|.++||+|.++...
T Consensus 7 ~~~~~~~~vlVt----------GatG~iG~~l~~~L~~~g~~V~~~~r~ 45 (292)
T 1vl0_A 7 HHHHHHMKILIT----------GANGQLGREIQKQLKGKNVEVIPTDVQ 45 (292)
T ss_dssp -----CEEEEEE----------STTSHHHHHHHHHHTTSSEEEEEECTT
T ss_pred ccccccceEEEE----------CCCChHHHHHHHHHHhCCCeEEeccCc
Confidence 345566888763 344444456778899999999887653
No 195
>2c5a_A GDP-mannose-3', 5'-epimerase; short chain dehydratase/reductase, GDP-gulose, GDP-galactose, keto intermediate, vitamin C, SDR; HET: GDC NAD BTB; 1.4A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 2c59_A* 2c54_A* 2c5e_A*
Probab=42.01 E-value=29 Score=33.04 Aligned_cols=25 Identities=28% Similarity=0.268 Sum_probs=19.0
Q ss_pred cCcHHHHHhHHHHHHHHCCCeEEEEeec
Q 011163 24 IGSLASYVTGLSGALQRKGHLVEVILPK 51 (492)
Q Consensus 24 ~GG~~~~~~~l~~~L~~~Gh~V~vi~~~ 51 (492)
.|++| ..+++.|.++||+|.++...
T Consensus 38 tG~iG---~~l~~~L~~~g~~V~~~~r~ 62 (379)
T 2c5a_A 38 GGFIA---SHIARRLKHEGHYVIASDWK 62 (379)
T ss_dssp TSHHH---HHHHHHHHHTTCEEEEEESS
T ss_pred ccHHH---HHHHHHHHHCCCeEEEEECC
Confidence 35555 56778899999999988754
No 196
>2w37_A Ornithine carbamoyltransferase, catabolic; transcarbamylase, metal binding-site, hexamer, cytoplasm, arginine metabolism; 2.10A {Lactobacillus hilgardii}
Probab=41.84 E-value=1.5e+02 Score=28.06 Aligned_cols=105 Identities=11% Similarity=0.183 Sum_probs=64.2
Q ss_pred ecCCCCCCCcCCCCCcccccccCccCccChHHHHHHHHHHhCCCCCCCceEEEEEeccccccCHHHHHHHHHHHhHcCcE
Q 011163 259 APCGFDSSTWDPSNDKFLTENYCAEDMKGKTVCKVTLQQQLGLSKDASTIVVGCIFSDVSDVFLENLKAVVRGAKMRGIQ 338 (492)
Q Consensus 259 I~nGvd~~~f~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~lg~~~~~~~~~i~~~grl~~~Kg~~~li~a~~~l~~~~~~ 338 (492)
|.||-+ +.++|. ..-.+--.+++.+|--. ...+.++|-. ...=...++.++..+ +++
T Consensus 147 VINa~~-~~~HPt---------------QaLaDl~Ti~E~~g~l~---gl~va~vGD~-~~rva~Sl~~~~~~l---G~~ 203 (359)
T 2w37_A 147 VWNGLT-DEWHPT---------------QMLADFMTVKENFGKLQ---GLTLTFMGDG-RNNVANSLLVTGAIL---GVN 203 (359)
T ss_dssp EEEEEC-SSCCHH---------------HHHHHHHHHHHHHSCCT---TCEEEEESCT-TSHHHHHHHHHHHHH---TCE
T ss_pred EEcCCC-CCCCcc---------------HHHHHHHHHHHHhCCcC---CeEEEEECCC-ccchHHHHHHHHHHc---CCE
Confidence 457776 677775 11234556778887322 3678899986 222245666666655 689
Q ss_pred EEEEecCC---ChhHHHHHHHHHHHhCCCeEEEEeccCHHHHHHHHhcCCEEEECCC
Q 011163 339 FVFTGTNK---LPSASRALVSFQEELKDGIVIFVDSYDDALLHLIFSGSDIILCHSF 392 (492)
Q Consensus 339 lvivG~g~---~~~~~~~l~~~~~~~~~~~v~~~~~~~~~~~~~~~~~adi~v~pS~ 392 (492)
+.+++..+ +++..+.+++.+++.+ ..+.+. -+. .+.+..||++....+
T Consensus 204 v~~~~P~~l~p~~~~~~~~~~~a~~~G-~~v~~~--~d~---~eav~~aDvvytd~w 254 (359)
T 2w37_A 204 IHIVAPKALFPTEETQNIAKGFAEKSG-AKLVIT--DDL---DEGLKGSNVVYTDVW 254 (359)
T ss_dssp EEEECCGGGSCCHHHHHHHHHHHHHHT-CCEEEE--SCH---HHHHTTCSEEEECCS
T ss_pred EEEECCccccCCHHHHHHHHHHHHHcC-CeEEEE--eCH---HHHhcCCCEEEEccc
Confidence 99998532 2234445566666663 466544 222 245799999988765
No 197
>2qsj_A DNA-binding response regulator, LUXR family; structural genomics, PSI-2, protein structure initiative; 2.10A {Silicibacter pomeroyi dss-3}
Probab=41.83 E-value=1.2e+02 Score=23.62 Aligned_cols=113 Identities=14% Similarity=-0.008 Sum_probs=61.1
Q ss_pred cEEEEEecCCChhHHHHHHHHHHHhCCC-eEEEEeccCHHHHHHHHh---cCCEEEECCC-CCCCchHHHHHhh---cCC
Q 011163 337 IQFVFTGTNKLPSASRALVSFQEELKDG-IVIFVDSYDDALLHLIFS---GSDIILCHSF-HDPLLQVPLKALK---YGA 408 (492)
Q Consensus 337 ~~lvivG~g~~~~~~~~l~~~~~~~~~~-~v~~~~~~~~~~~~~~~~---~adi~v~pS~-~E~~glv~lEAma---~G~ 408 (492)
.+++|+.+ ++...+.++...+..... .+.. .-+.++....+. ..|++++-.. .+.-|+-+++.+. ..+
T Consensus 4 ~~iLivdd--~~~~~~~l~~~L~~~~g~~~v~~--~~~~~~a~~~l~~~~~~dlvi~d~~l~~~~g~~~~~~l~~~~~~~ 79 (154)
T 2qsj_A 4 TVVLIVDD--HHLIRAGAKNLLEGAFSGMRVEG--AETVSDALAFLEADNTVDLILLDVNLPDAEAIDGLVRLKRFDPSN 79 (154)
T ss_dssp EEEEEECS--CHHHHHHHHHHHHHHCTTEEEEE--ESSHHHHHHHHHTTCCCSEEEECC------CHHHHHHHHHHCTTS
T ss_pred cEEEEEcC--CHHHHHHHHHHHHhCCCceEEEE--ecCHHHHHHHHhccCCCCEEEEeCCCCCCchHHHHHHHHHhCCCC
Confidence 56777763 345566666666665212 3332 233333334443 3688887544 2334666666654 367
Q ss_pred ceEEEecCCCcccccccccccccceeeeeecCCCHHHHHHHHHHHhcC
Q 011163 409 APIAVTSSDIEFRHFAEFDHESTRFSRFISSTFGNISLSQALEEIKNN 456 (492)
Q Consensus 409 PvV~~~~~~gg~~e~v~~~~~~~g~~G~~~~~~~~~~l~~ai~~~~~~ 456 (492)
|+|+... ..-.+.+... ...|..|++..|.+.+.|.++|..++..
T Consensus 80 ~ii~ls~--~~~~~~~~~~-~~~g~~~~l~kp~~~~~L~~~l~~~~~~ 124 (154)
T 2qsj_A 80 AVALISG--ETDHELIRAA-LEAGADGFIPKSADPQVLIHAVSLILEG 124 (154)
T ss_dssp EEEEC-------CHHHHHH-HHTTCCBBCCTTSCHHHHHHHHHHHHTT
T ss_pred eEEEEeC--CCCHHHHHHH-HHccCCEEEeCCCCHHHHHHHHHHHHcC
Confidence 7777543 2222222111 1145678999999999999999988753
No 198
>2gkg_A Response regulator homolog; social motility, receiver domain, signalling, high resolutio signaling protein; 1.00A {Myxococcus xanthus} PDB: 2i6f_A 2nt4_A 2nt3_A
Probab=41.68 E-value=1e+02 Score=22.77 Aligned_cols=111 Identities=9% Similarity=-0.082 Sum_probs=62.5
Q ss_pred cEEEEEecCCChhHHHHHHHHHHHhCCCeEEEEeccCHHHHHHHH--hcCCEEEECCCC--CCCchHHHHHhh-----cC
Q 011163 337 IQFVFTGTNKLPSASRALVSFQEELKDGIVIFVDSYDDALLHLIF--SGSDIILCHSFH--DPLLQVPLKALK-----YG 407 (492)
Q Consensus 337 ~~lvivG~g~~~~~~~~l~~~~~~~~~~~v~~~~~~~~~~~~~~~--~~adi~v~pS~~--E~~glv~lEAma-----~G 407 (492)
.+++|+.+ ++...+.++...+..+ -++.. ..+.++....+ ...|++++-... +.-|+.+++.+. ..
T Consensus 6 ~~ilivdd--~~~~~~~l~~~L~~~g-~~v~~--~~~~~~a~~~~~~~~~dlvi~d~~~~~~~~g~~~~~~l~~~~~~~~ 80 (127)
T 2gkg_A 6 KKILIVES--DTALSATLRSALEGRG-FTVDE--TTDGKGSVEQIRRDRPDLVVLAVDLSAGQNGYLICGKLKKDDDLKN 80 (127)
T ss_dssp CEEEEECS--CHHHHHHHHHHHHHHT-CEEEE--ECCHHHHHHHHHHHCCSEEEEESBCGGGCBHHHHHHHHHHSTTTTT
T ss_pred CeEEEEeC--CHHHHHHHHHHHHhcC-ceEEE--ecCHHHHHHHHHhcCCCEEEEeCCCCCCCCHHHHHHHHhcCccccC
Confidence 46677763 2344555666555542 34432 22332222222 246777764332 345666666653 46
Q ss_pred CceEEEecCCCcccccccccccccceeeeeecCCCHHHHHHHHHHHhcC
Q 011163 408 AAPIAVTSSDIEFRHFAEFDHESTRFSRFISSTFGNISLSQALEEIKNN 456 (492)
Q Consensus 408 ~PvV~~~~~~gg~~e~v~~~~~~~g~~G~~~~~~~~~~l~~ai~~~~~~ 456 (492)
+|+|+. . ..-.+..... ...|..+++..|.+.+.|.+++..+++.
T Consensus 81 ~~ii~~-~--~~~~~~~~~~-~~~g~~~~l~kp~~~~~l~~~i~~~~~~ 125 (127)
T 2gkg_A 81 VPIVII-G--NPDGFAQHRK-LKAHADEYVAKPVDADQLVERAGALIGF 125 (127)
T ss_dssp SCEEEE-E--CGGGHHHHHH-STTCCSEEEESSCCHHHHHHHHHHHHCC
T ss_pred CCEEEE-e--cCCchhHHHH-HHhCcchheeCCCCHHHHHHHHHHHHcC
Confidence 788877 4 3222322111 1245678999999999999999988754
No 199
>3oh8_A Nucleoside-diphosphate sugar epimerase (SULA FAMI; DUF1731_C, northeast structural genomics consortium, NESG, C PSI-biology; 2.00A {Corynebacterium glutamicum}
Probab=41.60 E-value=25 Score=35.25 Aligned_cols=35 Identities=23% Similarity=0.270 Sum_probs=25.4
Q ss_pred CceEEEEeeccccccccCcHHHHHhHHHHHHHHCCCeEEEEeecC
Q 011163 8 GFHIIHICTEMDPLVSIGSLASYVTGLSGALQRKGHLVEVILPKY 52 (492)
Q Consensus 8 ~mkIl~v~~~~~p~~~~GG~~~~~~~l~~~L~~~Gh~V~vi~~~~ 52 (492)
+||||+... +|.+| ..|++.|.+.||+|.++....
T Consensus 147 ~m~VLVTGa-------tG~IG---~~l~~~L~~~G~~V~~l~R~~ 181 (516)
T 3oh8_A 147 PLTVAITGS-------RGLVG---RALTAQLQTGGHEVIQLVRKE 181 (516)
T ss_dssp CCEEEEEST-------TSHHH---HHHHHHHHHTTCEEEEEESSS
T ss_pred CCEEEEECC-------CCHHH---HHHHHHHHHCCCEEEEEECCC
Confidence 688876332 35555 567888999999999988653
No 200
>3p0r_A Azoreductase; structural genomics, center for structural genomics of infec diseases, csgid, oxidoreductase; 1.80A {Bacillus anthracis}
Probab=41.53 E-value=31 Score=29.82 Aligned_cols=43 Identities=2% Similarity=-0.067 Sum_probs=28.4
Q ss_pred CCceEEEEeeccccccccCc-HHHHHhHHHHHHHHC--CCeEEEEeec
Q 011163 7 NGFHIIHICTEMDPLVSIGS-LASYVTGLSGALQRK--GHLVEVILPK 51 (492)
Q Consensus 7 ~~mkIl~v~~~~~p~~~~GG-~~~~~~~l~~~L~~~--Gh~V~vi~~~ 51 (492)
+.||||+|.. .|....+| .......+.+++.+. |++|.++-..
T Consensus 3 mM~kiLiI~g--Spr~~~~S~s~~l~~~~~~~~~~~~~g~ev~~~dL~ 48 (211)
T 3p0r_A 3 AMTKVLFVKA--NNRPAEQAVSVKLYEAFLASYKEAHPNDTVVELDLY 48 (211)
T ss_dssp -CCEEEEEEC--CCSCTTTCHHHHHHHHHHHHHHHHCTTSEEEEEEGG
T ss_pred ccCEEEEEEe--CCCCCCCCHHHHHHHHHHHHHHHhCCCCeEEEEECC
Confidence 3479999997 34311345 445556677777776 8999988754
No 201
>3hn2_A 2-dehydropantoate 2-reductase; PSI-2, NYSGXRC, structural GE protein structure initiative; 2.50A {Geobacter metallireducens}
Probab=41.37 E-value=21 Score=33.15 Aligned_cols=33 Identities=30% Similarity=0.498 Sum_probs=24.6
Q ss_pred CceEEEEeeccccccccCcHHHHHhHHHHHHHHCCCeEEEEeec
Q 011163 8 GFHIIHICTEMDPLVSIGSLASYVTGLSGALQRKGHLVEVILPK 51 (492)
Q Consensus 8 ~mkIl~v~~~~~p~~~~GG~~~~~~~l~~~L~~~Gh~V~vi~~~ 51 (492)
.|||++|.. |.+|..+ +..|.+.||+|+++...
T Consensus 2 ~mkI~IiGa--------GaiG~~~---a~~L~~~g~~V~~~~r~ 34 (312)
T 3hn2_A 2 SLRIAIVGA--------GALGLYY---GALLQRSGEDVHFLLRR 34 (312)
T ss_dssp --CEEEECC--------STTHHHH---HHHHHHTSCCEEEECST
T ss_pred CCEEEEECc--------CHHHHHH---HHHHHHCCCeEEEEEcC
Confidence 389999875 7777554 67788899999999864
No 202
>3g17_A Similar to 2-dehydropantoate 2-reductase; structural genomics, putative 2-dehydropantoate 2-reductase, protein structure initiative; 2.30A {Staphylococcus aureus subsp}
Probab=41.33 E-value=15 Score=33.79 Aligned_cols=33 Identities=15% Similarity=0.170 Sum_probs=25.4
Q ss_pred CceEEEEeeccccccccCcHHHHHhHHHHHHHHCCCeEEEEeec
Q 011163 8 GFHIIHICTEMDPLVSIGSLASYVTGLSGALQRKGHLVEVILPK 51 (492)
Q Consensus 8 ~mkIl~v~~~~~p~~~~GG~~~~~~~l~~~L~~~Gh~V~vi~~~ 51 (492)
.|||++|.. |.+|. .++..|.+.||+|+++...
T Consensus 2 ~mkI~iiGa--------Ga~G~---~~a~~L~~~g~~V~~~~r~ 34 (294)
T 3g17_A 2 SLSVAIIGP--------GAVGT---TIAYELQQSLPHTTLIGRH 34 (294)
T ss_dssp -CCEEEECC--------SHHHH---HHHHHHHHHCTTCEEEESS
T ss_pred CcEEEEECC--------CHHHH---HHHHHHHHCCCeEEEEEec
Confidence 489999764 77775 4567788899999999865
No 203
>1p9o_A Phosphopantothenoylcysteine synthetase; ligase; 2.30A {Homo sapiens} SCOP: c.72.3.1
Probab=41.31 E-value=29 Score=32.23 Aligned_cols=25 Identities=12% Similarity=-0.063 Sum_probs=21.2
Q ss_pred HHHHhHHHHHHHHCCCeEEEEeecC
Q 011163 28 ASYVTGLSGALQRKGHLVEVILPKY 52 (492)
Q Consensus 28 ~~~~~~l~~~L~~~Gh~V~vi~~~~ 52 (492)
|+.=..+++++.++|++|++++...
T Consensus 65 GkmG~aiAe~~~~~Ga~V~lv~g~~ 89 (313)
T 1p9o_A 65 GRRGATSAEAFLAAGYGVLFLYRAR 89 (313)
T ss_dssp CHHHHHHHHHHHHTTCEEEEEEETT
T ss_pred cHHHHHHHHHHHHCCCEEEEEecCC
Confidence 5666789999999999999998753
No 204
>3cfy_A Putative LUXO repressor protein; structural genomics, unknown function, uncharacterized protein, signal receiver domain; 2.50A {Vibrio parahaemolyticus rimd 2210633}
Probab=41.30 E-value=1.2e+02 Score=23.27 Aligned_cols=110 Identities=9% Similarity=-0.034 Sum_probs=58.9
Q ss_pred EEEEEecCCChhHHHHHHHHHHHhCCCeEEEEeccCHHHHHHHH--hcCCEEEECCC-CCCCchHHHHHhh---cCCceE
Q 011163 338 QFVFTGTNKLPSASRALVSFQEELKDGIVIFVDSYDDALLHLIF--SGSDIILCHSF-HDPLLQVPLKALK---YGAAPI 411 (492)
Q Consensus 338 ~lvivG~g~~~~~~~~l~~~~~~~~~~~v~~~~~~~~~~~~~~~--~~adi~v~pS~-~E~~glv~lEAma---~G~PvV 411 (492)
+++|+.+. +...+.++...+.. +-.|.. ..+.++....+ ...|++++=-. -+.-|+-+++.+. ..+|+|
T Consensus 6 ~ILivdd~--~~~~~~l~~~L~~~-g~~v~~--~~~~~~a~~~l~~~~~dlvllD~~l~~~~g~~l~~~l~~~~~~~~ii 80 (137)
T 3cfy_A 6 RVLLVEDS--TSLAILYKQYVKDE-PYDIFH--VETGRDAIQFIERSKPQLIILDLKLPDMSGEDVLDWINQNDIPTSVI 80 (137)
T ss_dssp EEEEECSC--TTHHHHHHHHTTTS-SSEEEE--ESSHHHHHHHHHHHCCSEEEECSBCSSSBHHHHHHHHHHTTCCCEEE
T ss_pred eEEEEeCC--HHHHHHHHHHHHhc-CceEEE--eCCHHHHHHHHHhcCCCEEEEecCCCCCCHHHHHHHHHhcCCCCCEE
Confidence 56777643 34444555544432 123332 22332222222 34688776543 2345666666553 456777
Q ss_pred EEecCCCcccccccccccccceeeeeecCCCHHHHHHHHHHHhc
Q 011163 412 AVTSSDIEFRHFAEFDHESTRFSRFISSTFGNISLSQALEEIKN 455 (492)
Q Consensus 412 ~~~~~~gg~~e~v~~~~~~~g~~G~~~~~~~~~~l~~ai~~~~~ 455 (492)
+... ..-.+..... ...|..+|+..|.+.+.|..+|..++.
T Consensus 81 ~ls~--~~~~~~~~~~-~~~ga~~~l~KP~~~~~L~~~i~~~~~ 121 (137)
T 3cfy_A 81 IATA--HGSVDLAVNL-IQKGAEDFLEKPINADRLKTSVALHLK 121 (137)
T ss_dssp EEES--SCCHHHHHHH-HHTTCSEEEESSCCHHHHHHHHHHHHH
T ss_pred EEEe--cCcHHHHHHH-HHCCccEEEeCCCCHHHHHHHHHHHHH
Confidence 6543 2222222111 114667899999999999999988753
No 205
>3ijp_A DHPR, dihydrodipicolinate reductase; ssgcid, SBRI, decode biostructures, niaid, amino-acid biosynthesis, cytoplasm; HET: NAP; 2.30A {Bartonella henselae}
Probab=41.27 E-value=23 Score=32.49 Aligned_cols=43 Identities=19% Similarity=-0.041 Sum_probs=29.4
Q ss_pred HHHHHhcCCEEEECCCCCCCchHHHHHhhcCCceEEEecCCCccc
Q 011163 377 LHLIFSGSDIILCHSFHDPLLQVPLKALKYGAAPIAVTSSDIEFR 421 (492)
Q Consensus 377 ~~~~~~~adi~v~pS~~E~~glv~lEAma~G~PvV~~~~~~gg~~ 421 (492)
+.+++..+|+.|--|..+..--.+..++..|+|+|+..+ |...
T Consensus 82 l~~ll~~aDVvIDFT~p~a~~~~~~~~l~~Gv~vViGTT--G~~~ 124 (288)
T 3ijp_A 82 PESAFSNTEGILDFSQPQASVLYANYAAQKSLIHIIGTT--GFSK 124 (288)
T ss_dssp HHHHTTSCSEEEECSCHHHHHHHHHHHHHHTCEEEECCC--CCCH
T ss_pred HHHHhcCCCEEEEcCCHHHHHHHHHHHHHcCCCEEEECC--CCCH
Confidence 345678999999766533322234567889999999877 6433
No 206
>3ko8_A NAD-dependent epimerase/dehydratase; isomerase, UDP-galactose 4-epimerase; HET: NAD; 1.80A {Pyrobaculum calidifontis} SCOP: c.2.1.0 PDB: 3icp_A* 3aw9_A*
Probab=41.19 E-value=25 Score=32.24 Aligned_cols=33 Identities=21% Similarity=0.180 Sum_probs=23.2
Q ss_pred ceEEEEeeccccccccCcHHHHHhHHHHHHHHCCCeEEEEeec
Q 011163 9 FHIIHICTEMDPLVSIGSLASYVTGLSGALQRKGHLVEVILPK 51 (492)
Q Consensus 9 mkIl~v~~~~~p~~~~GG~~~~~~~l~~~L~~~Gh~V~vi~~~ 51 (492)
|||++.. ..|++| ..+++.|.++||+|.++...
T Consensus 1 m~vlVtG-------atG~iG---~~l~~~L~~~g~~V~~~~r~ 33 (312)
T 3ko8_A 1 MRIVVTG-------GAGFIG---SHLVDKLVELGYEVVVVDNL 33 (312)
T ss_dssp CEEEEET-------TTSHHH---HHHHHHHHHTTCEEEEECCC
T ss_pred CEEEEEC-------CCChHH---HHHHHHHHhCCCEEEEEeCC
Confidence 6775532 235555 56788899999999988654
No 207
>2vns_A Metalloreductase steap3; metal-binding, transmembrane, rossmann fold, transport, cell cycle, transferrin, flavoprotein, alternative splicing; HET: CIT; 2.0A {Homo sapiens} PDB: 2vq3_A*
Probab=41.01 E-value=25 Score=30.55 Aligned_cols=34 Identities=21% Similarity=0.150 Sum_probs=22.7
Q ss_pred CCCceEEEEeeccccccccCcHHHHHhHHHHHHHHCCCeEEEEee
Q 011163 6 RNGFHIIHICTEMDPLVSIGSLASYVTGLSGALQRKGHLVEVILP 50 (492)
Q Consensus 6 ~~~mkIl~v~~~~~p~~~~GG~~~~~~~l~~~L~~~Gh~V~vi~~ 50 (492)
++.|||++|.. |.++ ..++..|.+.||+|.++..
T Consensus 26 ~~~~~I~iiG~--------G~~G---~~la~~l~~~g~~V~~~~r 59 (215)
T 2vns_A 26 DEAPKVGILGS--------GDFA---RSLATRLVGSGFKVVVGSR 59 (215)
T ss_dssp ---CCEEEECC--------SHHH---HHHHHHHHHTTCCEEEEES
T ss_pred CCCCEEEEEcc--------CHHH---HHHHHHHHHCCCEEEEEeC
Confidence 34588887653 5555 4567788999999987754
No 208
>3qvo_A NMRA family protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, unknown function; HET: MNB; 2.30A {Shigella flexneri 2A}
Probab=40.87 E-value=20 Score=31.53 Aligned_cols=35 Identities=14% Similarity=0.096 Sum_probs=24.6
Q ss_pred CceEEEEeeccccccccCcHHHHHhHHHHHHHHCC-CeEEEEeec
Q 011163 8 GFHIIHICTEMDPLVSIGSLASYVTGLSGALQRKG-HLVEVILPK 51 (492)
Q Consensus 8 ~mkIl~v~~~~~p~~~~GG~~~~~~~l~~~L~~~G-h~V~vi~~~ 51 (492)
.||.++|+- ..||+| ..+++.|.+.| ++|.++...
T Consensus 22 ~mk~vlVtG------atG~iG---~~l~~~L~~~G~~~V~~~~R~ 57 (236)
T 3qvo_A 22 HMKNVLILG------AGGQIA---RHVINQLADKQTIKQTLFARQ 57 (236)
T ss_dssp CCEEEEEET------TTSHHH---HHHHHHHTTCTTEEEEEEESS
T ss_pred cccEEEEEe------CCcHHH---HHHHHHHHhCCCceEEEEEcC
Confidence 356556563 346666 46778899999 899888754
No 209
>1g3q_A MIND ATPase, cell division inhibitor; alpha-beta-alpha layered, protein-ADP complex, cell cycle, hydrolase; HET: ADP; 2.00A {Pyrococcus furiosus} SCOP: c.37.1.10 PDB: 1g3r_A* 1ion_A*
Probab=40.77 E-value=27 Score=30.53 Aligned_cols=38 Identities=26% Similarity=0.246 Sum_probs=27.7
Q ss_pred ceEEEEeeccccccccCcHH--HHHhHHHHHHHHCCCeEEEEeecC
Q 011163 9 FHIIHICTEMDPLVSIGSLA--SYVTGLSGALQRKGHLVEVILPKY 52 (492)
Q Consensus 9 mkIl~v~~~~~p~~~~GG~~--~~~~~l~~~L~~~Gh~V~vi~~~~ 52 (492)
||++.|+.. .||+| +.+.+|+..|+++|++|.++=.+.
T Consensus 2 ~~~i~v~s~------kgGvGKTt~a~~LA~~la~~g~~VlliD~D~ 41 (237)
T 1g3q_A 2 GRIISIVSG------KGGTGKTTVTANLSVALGDRGRKVLAVDGDL 41 (237)
T ss_dssp CEEEEEECS------STTSSHHHHHHHHHHHHHHTTCCEEEEECCT
T ss_pred ceEEEEecC------CCCCCHHHHHHHHHHHHHhcCCeEEEEeCCC
Confidence 466666642 35555 567889999999999999986543
No 210
>3zqu_A Probable aromatic acid decarboxylase; lyase; HET: FNR; 1.50A {Pseudomonas aeruginosa} SCOP: c.34.1.0
Probab=40.66 E-value=41 Score=29.20 Aligned_cols=35 Identities=26% Similarity=0.239 Sum_probs=26.5
Q ss_pred ceEEEEeeccccccccCc-HHHHHhHHHHHHHHCCCeEEEEeec
Q 011163 9 FHIIHICTEMDPLVSIGS-LASYVTGLSGALQRKGHLVEVILPK 51 (492)
Q Consensus 9 mkIl~v~~~~~p~~~~GG-~~~~~~~l~~~L~~~Gh~V~vi~~~ 51 (492)
+||++-.+ |+ ...+..+|.+.|.+.|++|.|+...
T Consensus 5 k~IllgvT--------Gaiaa~k~~~ll~~L~~~g~eV~vv~T~ 40 (209)
T 3zqu_A 5 ERITLAMT--------GASGAQYGLRLLDCLVQEEREVHFLISK 40 (209)
T ss_dssp SEEEEEEC--------SSSCHHHHHHHHHHHHHTTCEEEEEECH
T ss_pred CEEEEEEE--------CHHHHHHHHHHHHHHHHCCCEEEEEECc
Confidence 57877554 44 3445778999999999999999754
No 211
>2jba_A Phosphate regulon transcriptional regulatory PROT; transcription factor, sensory transduction, phosphate regula transcription regulation; 1.45A {Escherichia coli} PDB: 2jba_B 1b00_A 2iyn_A 2jb9_A 1zes_A
Probab=40.59 E-value=90 Score=23.31 Aligned_cols=111 Identities=11% Similarity=-0.036 Sum_probs=60.6
Q ss_pred cEEEEEecCCChhHHHHHHHHHHHhCCCeEEEEeccCHHHHHHHHh--cCCEEEECCC-CCCCchHHHHHhh-----cCC
Q 011163 337 IQFVFTGTNKLPSASRALVSFQEELKDGIVIFVDSYDDALLHLIFS--GSDIILCHSF-HDPLLQVPLKALK-----YGA 408 (492)
Q Consensus 337 ~~lvivG~g~~~~~~~~l~~~~~~~~~~~v~~~~~~~~~~~~~~~~--~adi~v~pS~-~E~~glv~lEAma-----~G~ 408 (492)
.+++|+.+. +...+.++...+..+ -.+.. ..+.++....+. ..|++++=.. -+..|+..++.+. ..+
T Consensus 3 ~~ilivdd~--~~~~~~l~~~l~~~g-~~v~~--~~~~~~a~~~~~~~~~dlvi~D~~l~~~~g~~~~~~l~~~~~~~~~ 77 (127)
T 2jba_A 3 RRILVVEDE--APIREMVCFVLEQNG-FQPVE--AEDYDSAVNQLNEPWPDLILLAWMLPGGSGIQFIKHLRRESMTRDI 77 (127)
T ss_dssp CEEEEECSC--HHHHHHHHHHHHHTT-CEEEE--ECSHHHHHTTCSSSCCSEEEEESEETTEEHHHHHHHHHTSTTTTTS
T ss_pred cEEEEEcCC--HHHHHHHHHHHHHCC-ceEEE--eCCHHHHHHHHhccCCCEEEEecCCCCCCHHHHHHHHHhCcccCCC
Confidence 356677633 445556666555542 33332 223333223332 3577776433 2335666676664 456
Q ss_pred ceEEEecCCCcccccccccccccceeeeeecCCCHHHHHHHHHHHhc
Q 011163 409 APIAVTSSDIEFRHFAEFDHESTRFSRFISSTFGNISLSQALEEIKN 455 (492)
Q Consensus 409 PvV~~~~~~gg~~e~v~~~~~~~g~~G~~~~~~~~~~l~~ai~~~~~ 455 (492)
|+|+... ..-.+.... ....|..+|+..|.+.+.|.+++..++.
T Consensus 78 ~ii~~s~--~~~~~~~~~-~~~~ga~~~l~Kp~~~~~l~~~i~~~~~ 121 (127)
T 2jba_A 78 PVVMLTA--RGEEEDRVR-GLETGADDCITKPFSPKELVARIKAVMR 121 (127)
T ss_dssp CEEEEEE--TTHHHHHHT-TCCCSCSEEEEESCCHHHHHHHHHHHHH
T ss_pred CEEEEeC--CCCHHHHHH-HHhcCCCeEEeCCCCHHHHHHHHHHHHh
Confidence 7776543 222222211 1124667899999999999999987753
No 212
>1mvl_A PPC decarboxylase athal3A; flavoprotein, active site mutant C175S; HET: FMN; 2.00A {Arabidopsis thaliana} SCOP: c.34.1.1 PDB: 1mvn_A* 1e20_A*
Probab=40.55 E-value=27 Score=30.39 Aligned_cols=35 Identities=17% Similarity=0.232 Sum_probs=26.6
Q ss_pred CceEEEEeeccccccccCcHHH-HHhHHHHHHHHCCCeEEEEeec
Q 011163 8 GFHIIHICTEMDPLVSIGSLAS-YVTGLSGALQRKGHLVEVILPK 51 (492)
Q Consensus 8 ~mkIl~v~~~~~p~~~~GG~~~-~~~~l~~~L~~~Gh~V~vi~~~ 51 (492)
++||++..+ ||++. ...+|.+.|.+.| +|.|+...
T Consensus 19 ~k~IllgvT--------Gsiaa~k~~~ll~~L~~~g-~V~vv~T~ 54 (209)
T 1mvl_A 19 KPRVLLAAS--------GSVAAIKFGNLCHCFTEWA-EVRAVVTK 54 (209)
T ss_dssp CCEEEEEEC--------SSGGGGGHHHHHHHHHTTS-EEEEEECT
T ss_pred CCEEEEEEe--------CcHHHHHHHHHHHHHhcCC-CEEEEEcc
Confidence 468887665 45443 3788999999999 99999754
No 213
>2gk4_A Conserved hypothetical protein; alpha-beta-alpha sandwich, flavoprotein, structural genomics protein structure initiative; 1.83A {Streptococcus pneumoniae}
Probab=40.21 E-value=28 Score=30.78 Aligned_cols=25 Identities=28% Similarity=0.290 Sum_probs=20.6
Q ss_pred cCcHHHHHhHHHHHHHHCCCeEEEEeec
Q 011163 24 IGSLASYVTGLSGALQRKGHLVEVILPK 51 (492)
Q Consensus 24 ~GG~~~~~~~l~~~L~~~Gh~V~vi~~~ 51 (492)
+|++| ..+++++.++|++|++++..
T Consensus 28 SG~mG---~aiA~~~~~~Ga~V~lv~~~ 52 (232)
T 2gk4_A 28 TGHLG---KIITETLLSAGYEVCLITTK 52 (232)
T ss_dssp CCHHH---HHHHHHHHHTTCEEEEEECT
T ss_pred CCHHH---HHHHHHHHHCCCEEEEEeCC
Confidence 46666 66799999999999999864
No 214
>3eag_A UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl-ME diaminopimelate ligase; UDP-N-acetylmuramate:L-alanyl-G glutamyl-MESO-diaminopimelate ligase; 2.55A {Neisseria meningitidis MC58}
Probab=40.19 E-value=30 Score=32.34 Aligned_cols=33 Identities=24% Similarity=0.148 Sum_probs=25.4
Q ss_pred CCceEEEEeeccccccccCcHHHHHhHHHHHHHHCCCeEEEEe
Q 011163 7 NGFHIIHICTEMDPLVSIGSLASYVTGLSGALQRKGHLVEVIL 49 (492)
Q Consensus 7 ~~mkIl~v~~~~~p~~~~GG~~~~~~~l~~~L~~~Gh~V~vi~ 49 (492)
..|||.+|.- ||.+ +..+++-|.++|++|++.=
T Consensus 3 ~~~~i~~iGi--------Gg~G--ms~~A~~L~~~G~~V~~~D 35 (326)
T 3eag_A 3 AMKHIHIIGI--------GGTF--MGGLAAIAKEAGFEVSGCD 35 (326)
T ss_dssp CCCEEEEESC--------CSHH--HHHHHHHHHHTTCEEEEEE
T ss_pred CCcEEEEEEE--------CHHH--HHHHHHHHHhCCCEEEEEc
Confidence 4567877653 8888 5567888999999998864
No 215
>1p6q_A CHEY2; chemotaxis, signal transduction, response regulator, structural proteomics in europe, spine, structural genomics; NMR {Sinorhizobium meliloti} SCOP: c.23.1.1 PDB: 1p6u_A
Probab=39.93 E-value=1.1e+02 Score=22.87 Aligned_cols=111 Identities=14% Similarity=0.046 Sum_probs=60.1
Q ss_pred cEEEEEecCCChhHHHHHHHHHHHhCCCeEEEEeccCHHHHHHHHh--cCCEEEECCC-CCCCchHHHHHhh-----cCC
Q 011163 337 IQFVFTGTNKLPSASRALVSFQEELKDGIVIFVDSYDDALLHLIFS--GSDIILCHSF-HDPLLQVPLKALK-----YGA 408 (492)
Q Consensus 337 ~~lvivG~g~~~~~~~~l~~~~~~~~~~~v~~~~~~~~~~~~~~~~--~adi~v~pS~-~E~~glv~lEAma-----~G~ 408 (492)
.+++|+.+. +...+.++...+..+-..+.. .-+.++....+. ..|++++=.. -+.-|+-+++.+. ..+
T Consensus 7 ~~ilivdd~--~~~~~~l~~~L~~~g~~~v~~--~~~~~~a~~~~~~~~~dlvl~D~~l~~~~g~~~~~~l~~~~~~~~~ 82 (129)
T 1p6q_A 7 IKVLIVDDQ--VTSRLLLGDALQQLGFKQITA--AGDGEQGMKIMAQNPHHLVISDFNMPKMDGLGLLQAVRANPATKKA 82 (129)
T ss_dssp CCEEEECSS--HHHHHHHHHHHHTTTCSCEEC--CSSHHHHHHHHHTSCCSEEEECSSSCSSCHHHHHHHHTTCTTSTTC
T ss_pred CeEEEEcCC--HHHHHHHHHHHHHCCCcEEEe--cCCHHHHHHHHHcCCCCEEEEeCCCCCCCHHHHHHHHhcCccccCC
Confidence 467777643 344555666555432113331 223333333333 3588776543 2445777777764 356
Q ss_pred ceEEEecCCCcccccccccccccceeeeeecCCCHHHHHHHHHHHh
Q 011163 409 APIAVTSSDIEFRHFAEFDHESTRFSRFISSTFGNISLSQALEEIK 454 (492)
Q Consensus 409 PvV~~~~~~gg~~e~v~~~~~~~g~~G~~~~~~~~~~l~~ai~~~~ 454 (492)
|+|+... .+-.+.+... ...|..+|+..|.+.+.|.++|..++
T Consensus 83 ~ii~~s~--~~~~~~~~~~-~~~g~~~~l~KP~~~~~l~~~i~~~~ 125 (129)
T 1p6q_A 83 AFIILTA--QGDRALVQKA-AALGANNVLAKPFTIEKMKAAIEAVF 125 (129)
T ss_dssp EEEECCS--CCCHHHHHHH-HHHTCSCEECCCSSHHHHHHHHHHHH
T ss_pred CEEEEeC--CCCHHHHHHH-HHcCCCEEEECCCCHHHHHHHHHHHH
Confidence 6766443 2222221110 11355689999999999999998765
No 216
>3cz5_A Two-component response regulator, LUXR family; structural genomics, protein structure initiative; 2.70A {Aurantimonas SP}
Probab=39.56 E-value=1.3e+02 Score=23.39 Aligned_cols=114 Identities=15% Similarity=0.096 Sum_probs=62.7
Q ss_pred CcEEEEEecCCChhHHHHHHHHHHHhCCCeEEEE-eccCHHHHHHHHh--cCCEEEECCC-CCCCchHHHHHhh---cCC
Q 011163 336 GIQFVFTGTNKLPSASRALVSFQEELKDGIVIFV-DSYDDALLHLIFS--GSDIILCHSF-HDPLLQVPLKALK---YGA 408 (492)
Q Consensus 336 ~~~lvivG~g~~~~~~~~l~~~~~~~~~~~v~~~-~~~~~~~~~~~~~--~adi~v~pS~-~E~~glv~lEAma---~G~ 408 (492)
..+++|+.+ ++...+.++...+.. ..+... ...+.++....+. ..|++++-.. .+.-|+-+++.+. ..+
T Consensus 5 ~~~ILivdd--~~~~~~~l~~~L~~~--~~~~v~~~~~~~~~a~~~l~~~~~dlii~D~~l~~~~g~~~~~~l~~~~~~~ 80 (153)
T 3cz5_A 5 TARIMLVDD--HPIVREGYRRLIERR--PGYAVVAEAADAGEAYRLYRETTPDIVVMDLTLPGPGGIEATRHIRQWDGAA 80 (153)
T ss_dssp CEEEEEECS--CHHHHHHHHHHHTTS--TTEEEEEEESSHHHHHHHHHTTCCSEEEECSCCSSSCHHHHHHHHHHHCTTC
T ss_pred ccEEEEECC--cHHHHHHHHHHHhhC--CCcEEEEEeCCHHHHHHHHhcCCCCEEEEecCCCCCCHHHHHHHHHHhCCCC
Confidence 356777763 234455555554442 122222 2233333333333 3688777543 3445666666653 367
Q ss_pred ceEEEecCCCcccccccccccccceeeeeecCCCHHHHHHHHHHHhcC
Q 011163 409 APIAVTSSDIEFRHFAEFDHESTRFSRFISSTFGNISLSQALEEIKNN 456 (492)
Q Consensus 409 PvV~~~~~~gg~~e~v~~~~~~~g~~G~~~~~~~~~~l~~ai~~~~~~ 456 (492)
|+|+... ..-.+..... ...|..||+..|.+.+.|.++|..++..
T Consensus 81 ~ii~ls~--~~~~~~~~~~-~~~g~~~~l~kp~~~~~L~~~i~~~~~~ 125 (153)
T 3cz5_A 81 RILIFTM--HQGSAFALKA-FEAGASGYVTKSSDPAELVQAIEAILAG 125 (153)
T ss_dssp CEEEEES--CCSHHHHHHH-HHTTCSEEEETTSCTTHHHHHHHHHTTT
T ss_pred eEEEEEC--CCCHHHHHHH-HHCCCcEEEecCCCHHHHHHHHHHHHhC
Confidence 7777553 2222222111 1146678999999999999999998753
No 217
>3fgn_A Dethiobiotin synthetase; biotin biosynthesis, BIOD, ATP-BIND ligase, magnesium, nucleotide-binding; 1.85A {Mycobacterium tuberculosis} PDB: 3fmf_A* 3fmi_A* 3fpa_A*
Probab=39.36 E-value=51 Score=29.45 Aligned_cols=41 Identities=17% Similarity=0.144 Sum_probs=32.3
Q ss_pred CCCceEEEEeeccccccccCcHHHHHhHHHHHHHHCCCeEEEEee
Q 011163 6 RNGFHIIHICTEMDPLVSIGSLASYVTGLSGALQRKGHLVEVILP 50 (492)
Q Consensus 6 ~~~mkIl~v~~~~~p~~~~GG~~~~~~~l~~~L~~~Gh~V~vi~~ 50 (492)
.+.||.++|+..- .--|-..++..|+++|.++|.+|..+=|
T Consensus 23 ~~~m~~i~Itgt~----t~vGKT~vt~gL~~~l~~~G~~V~~fKP 63 (251)
T 3fgn_A 23 QSHMTILVVTGTG----TGVGKTVVCAALASAARQAGIDVAVCKP 63 (251)
T ss_dssp CSSCEEEEEEESS----TTSCHHHHHHHHHHHHHHTTCCEEEEEE
T ss_pred ccCCCEEEEEeCC----CCCcHHHHHHHHHHHHHHCCCeEEEEee
Confidence 4569999998731 1246777888999999999999999866
No 218
>1iow_A DD-ligase, DDLB, D-ALA\:D-Ala ligase; glycogen phosphorylase, cell WALL, peptidoglycan synthesis, vancomycin, ADP binding; HET: ADP PHY; 1.90A {Escherichia coli} SCOP: c.30.1.2 d.142.1.1 PDB: 1iov_A* 2dln_A* 3v4z_A*
Probab=39.34 E-value=22 Score=32.52 Aligned_cols=39 Identities=13% Similarity=0.003 Sum_probs=27.1
Q ss_pred CceEEEEeeccccccccCcHHH---HHhHHHHHHHHCCCeEEEEeec
Q 011163 8 GFHIIHICTEMDPLVSIGSLAS---YVTGLSGALQRKGHLVEVILPK 51 (492)
Q Consensus 8 ~mkIl~v~~~~~p~~~~GG~~~---~~~~l~~~L~~~Gh~V~vi~~~ 51 (492)
+|||+++.....+ .-.. ....+++++.++||+|.++.+.
T Consensus 2 ~~~i~il~gg~s~-----e~~~s~~~~~~l~~al~~~G~~v~~~~~~ 43 (306)
T 1iow_A 2 TDKIAVLLGGTSA-----EREVSLNSGAAVLAGLREGGIDAYPVDPK 43 (306)
T ss_dssp CCEEEEECCCSST-----THHHHHHHHHHHHHHHHHTTCEEEEECTT
T ss_pred CcEEEEEeCCCCc-----cceEcHHhHHHHHHHHHHCCCeEEEEecC
Confidence 4899998752111 1112 3467999999999999998765
No 219
>4g65_A TRK system potassium uptake protein TRKA; structural genomics, center for structural genomics of infec diseases, csgid, niaid; HET: MSE; 2.09A {Vibrio vulnificus}
Probab=39.33 E-value=10 Score=37.60 Aligned_cols=64 Identities=19% Similarity=0.281 Sum_probs=44.5
Q ss_pred HHHHHHHHHHhCCCeEEEEe-ccCHHHHHH-HHhcCCEEEECCC-CCCCchHHHHHhhcCCceEEEec
Q 011163 351 SRALVSFQEELKDGIVIFVD-SYDDALLHL-IFSGSDIILCHSF-HDPLLQVPLKALKYGAAPIAVTS 415 (492)
Q Consensus 351 ~~~l~~~~~~~~~~~v~~~~-~~~~~~~~~-~~~~adi~v~pS~-~E~~glv~lEAma~G~PvV~~~~ 415 (492)
.++.++++++++ +-+.+.| +.+.+.+.+ =+..+|+|+.... .|.==++.+-|-.+|++-+.+.+
T Consensus 267 ~~r~~~la~~l~-~~~Vi~GD~td~~~L~ee~i~~~D~~ia~T~~De~Ni~~~llAk~~gv~kvIa~v 333 (461)
T 4g65_A 267 LQRAEKLSEELE-NTIVFCGDAADQELLTEENIDQVDVFIALTNEDETNIMSAMLAKRMGAKKVMVLI 333 (461)
T ss_dssp HHHHHHHHHHCT-TSEEEESCTTCHHHHHHTTGGGCSEEEECCSCHHHHHHHHHHHHHTTCSEEEEEC
T ss_pred HHHHHHHHHHCC-CceEEeccccchhhHhhcCchhhcEEEEcccCcHHHHHHHHHHHHcCCccccccc
Confidence 456777888874 3344444 335555533 3688999998875 46666777889999999888887
No 220
>3l77_A Short-chain alcohol dehydrogenase; oxidoreductase; HET: NJP PG4; 1.60A {Thermococcus sibiricus} SCOP: c.2.1.0 PDB: 3tn7_A*
Probab=39.29 E-value=31 Score=30.14 Aligned_cols=34 Identities=15% Similarity=0.217 Sum_probs=25.5
Q ss_pred ceEEEEeeccccccccCcHHHHHhHHHHHHHHCCCeEEEEeec
Q 011163 9 FHIIHICTEMDPLVSIGSLASYVTGLSGALQRKGHLVEVILPK 51 (492)
Q Consensus 9 mkIl~v~~~~~p~~~~GG~~~~~~~l~~~L~~~Gh~V~vi~~~ 51 (492)
||.++||- ..||+| ..+++.|.++|++|.++...
T Consensus 2 ~k~vlITG------as~gIG---~~ia~~l~~~G~~V~~~~r~ 35 (235)
T 3l77_A 2 MKVAVITG------ASRGIG---EAIARALARDGYALALGARS 35 (235)
T ss_dssp CCEEEEES------CSSHHH---HHHHHHHHHTTCEEEEEESC
T ss_pred CCEEEEEC------CCcHHH---HHHHHHHHHCCCEEEEEeCC
Confidence 67777774 346777 47789999999998777643
No 221
>4eg0_A D-alanine--D-alanine ligase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 1.65A {Burkholderia ambifaria} PDB: 4egq_A 4egj_A
Probab=39.28 E-value=22 Score=33.01 Aligned_cols=44 Identities=7% Similarity=-0.151 Sum_probs=28.8
Q ss_pred cCCCceEEEEeeccccccccCcHHHHHhHHHHHHHHCCCeEEEEee
Q 011163 5 LRNGFHIIHICTEMDPLVSIGSLASYVTGLSGALQRKGHLVEVILP 50 (492)
Q Consensus 5 ~~~~mkIl~v~~~~~p~~~~GG~~~~~~~l~~~L~~~Gh~V~vi~~ 50 (492)
+.++|||+++.....+.. -.--.....++++|.+.||+|.++-+
T Consensus 10 ~~~~~~v~vl~gg~s~E~--~vsl~s~~~v~~al~~~g~~v~~i~~ 53 (317)
T 4eg0_A 10 PKRFGKVAVLFGGESAER--EVSLTSGRLVLQGLRDAGIDAHPFDP 53 (317)
T ss_dssp GGGGCEEEEECCCSSTTH--HHHHHHHHHHHHHHHHTTCEEEEECT
T ss_pred hhhcceEEEEECCCCCcc--eeeHHHHHHHHHHHHHCCCEEEEEeC
Confidence 345678999885322210 00112457889999999999999874
No 222
>3i83_A 2-dehydropantoate 2-reductase; structural genomics, oxidoreductase, NADP, pantothenate BIOS PSI-2, protein structure initiative; 1.90A {Methylococcus capsulatus}
Probab=39.21 E-value=25 Score=32.68 Aligned_cols=33 Identities=30% Similarity=0.564 Sum_probs=25.1
Q ss_pred CceEEEEeeccccccccCcHHHHHhHHHHHHHHCCCeEEEEeec
Q 011163 8 GFHIIHICTEMDPLVSIGSLASYVTGLSGALQRKGHLVEVILPK 51 (492)
Q Consensus 8 ~mkIl~v~~~~~p~~~~GG~~~~~~~l~~~L~~~Gh~V~vi~~~ 51 (492)
.|||++|.. |.+|.. ++..|.+.||+|+++...
T Consensus 2 ~mkI~IiGa--------GaiG~~---~a~~L~~~g~~V~~~~r~ 34 (320)
T 3i83_A 2 SLNILVIGT--------GAIGSF---YGALLAKTGHCVSVVSRS 34 (320)
T ss_dssp -CEEEEESC--------CHHHHH---HHHHHHHTTCEEEEECST
T ss_pred CCEEEEECc--------CHHHHH---HHHHHHhCCCeEEEEeCC
Confidence 489998764 667754 567788899999999864
No 223
>2wqk_A 5'-nucleotidase SURE; SURE protein, putative acid phosphatase, structural genomics, 3-D structure, mixed alpha/beta protein, NPPSFA; 1.50A {Aquifex aeolicus}
Probab=38.81 E-value=27 Score=31.32 Aligned_cols=38 Identities=18% Similarity=0.207 Sum_probs=27.9
Q ss_pred ceEEEEeeccccccccCcHHHHHhHHHHHHHHCCCeEEEEeecCCC
Q 011163 9 FHIIHICTEMDPLVSIGSLASYVTGLSGALQRKGHLVEVILPKYAC 54 (492)
Q Consensus 9 mkIl~v~~~~~p~~~~GG~~~~~~~l~~~L~~~Gh~V~vi~~~~~~ 54 (492)
.|||+.+++.. -...+..|+++|.+.| +|.|++|....
T Consensus 2 p~ILlTNDDGi-------~apGi~~L~~~l~~~g-~V~VvAP~~~~ 39 (251)
T 2wqk_A 2 PTFLLVNDDGY-------FSPGINALREALKSLG-RVVVVAPDRNL 39 (251)
T ss_dssp CEEEEECSSCT-------TCHHHHHHHHHHTTTS-EEEEEEESSCC
T ss_pred CEEEEEcCCCC-------CcHHHHHHHHHHHhCC-CEEEEeeCCCC
Confidence 38988887632 2234677889999998 69999997553
No 224
>3qjg_A Epidermin biosynthesis protein EPID; structural genomics, center for structural genomics of infec diseases, csgid, oxidoreductase; HET: FMN; 2.04A {Staphylococcus aureus} SCOP: c.34.1.0
Probab=38.74 E-value=27 Score=29.40 Aligned_cols=35 Identities=23% Similarity=0.171 Sum_probs=26.5
Q ss_pred ceEEEEeeccccccccCcHHH-HHhHHHHHHHHCCCeEEEEeec
Q 011163 9 FHIIHICTEMDPLVSIGSLAS-YVTGLSGALQRKGHLVEVILPK 51 (492)
Q Consensus 9 mkIl~v~~~~~p~~~~GG~~~-~~~~l~~~L~~~Gh~V~vi~~~ 51 (492)
+||++..+ ||.+. +..++.+.|.+.|++|.++...
T Consensus 6 k~IllgvT--------Gs~aa~k~~~ll~~L~~~g~~V~vv~T~ 41 (175)
T 3qjg_A 6 ENVLICLC--------GSVNSINISHYIIELKSKFDEVNVIAST 41 (175)
T ss_dssp CEEEEEEC--------SSGGGGGHHHHHHHHTTTCSEEEEEECT
T ss_pred CEEEEEEe--------CHHHHHHHHHHHHHHHHCCCEEEEEECc
Confidence 58877665 34333 4678999999999999999754
No 225
>3d7l_A LIN1944 protein; APC89317, structural genomics, PS protein structure initiative, midwest center for structural genomics, MCSG; 2.06A {Listeria innocua}
Probab=38.60 E-value=25 Score=29.80 Aligned_cols=34 Identities=24% Similarity=0.268 Sum_probs=22.9
Q ss_pred CCceEEEEeeccccccccCcHHHHHhHHHHHHHHCCCeEEEEeec
Q 011163 7 NGFHIIHICTEMDPLVSIGSLASYVTGLSGALQRKGHLVEVILPK 51 (492)
Q Consensus 7 ~~mkIl~v~~~~~p~~~~GG~~~~~~~l~~~L~~~Gh~V~vi~~~ 51 (492)
++|||++.. ..||+| ..+++.|. +|++|.++...
T Consensus 2 ~kM~vlVtG-------asg~iG---~~~~~~l~-~g~~V~~~~r~ 35 (202)
T 3d7l_A 2 NAMKILLIG-------ASGTLG---SAVKERLE-KKAEVITAGRH 35 (202)
T ss_dssp CSCEEEEET-------TTSHHH---HHHHHHHT-TTSEEEEEESS
T ss_pred CCcEEEEEc-------CCcHHH---HHHHHHHH-CCCeEEEEecC
Confidence 347865533 246666 55677888 89999887653
No 226
>1duv_G Octase-1, ornithine transcarbamoylase; enzyme-inhibitor complex, transferase; HET: PSQ; 1.70A {Escherichia coli} SCOP: c.78.1.1 c.78.1.1 PDB: 1akm_A* 2otc_A*
Probab=38.47 E-value=1.9e+02 Score=26.98 Aligned_cols=106 Identities=10% Similarity=0.122 Sum_probs=64.1
Q ss_pred ecCCCCCCCcCCCCCcccccccCccCccChHHHHHHHHHH-hCCCCCCCceEEEEEeccccccCHHHHHHHHHHHhHcCc
Q 011163 259 APCGFDSSTWDPSNDKFLTENYCAEDMKGKTVCKVTLQQQ-LGLSKDASTIVVGCIFSDVSDVFLENLKAVVRGAKMRGI 337 (492)
Q Consensus 259 I~nGvd~~~f~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~-lg~~~~~~~~~i~~~grl~~~Kg~~~li~a~~~l~~~~~ 337 (492)
|.||-+ +.++|. ..-.+--.+++. +|-.- +...+.++|-. ...=...++.++..+ ++
T Consensus 124 VINa~~-~~~HPt---------------Q~LaDl~Ti~e~~~g~~l--~gl~ia~vGD~-~~~va~Sl~~~~~~~---G~ 181 (333)
T 1duv_G 124 VWNGLT-NEFHPT---------------QLLADLLTMQEHLPGKAF--NEMTLVYAGDA-RNNMGNSMLEAAALT---GL 181 (333)
T ss_dssp EEESCC-SSCCHH---------------HHHHHHHHHHHHSTTCCG--GGCEEEEESCT-TSHHHHHHHHHHHHH---CC
T ss_pred eEcCCC-CCCCch---------------HHHHHHHHHHHHhcCCCC--CCcEEEEECCC-ccchHHHHHHHHHHc---CC
Confidence 457876 777875 112244567788 76211 23678899986 222245666666655 68
Q ss_pred EEEEEecCC---ChhHHHHHHHHHHHhCCCeEEEEeccCHHHHHHHHhcCCEEEECCC
Q 011163 338 QFVFTGTNK---LPSASRALVSFQEELKDGIVIFVDSYDDALLHLIFSGSDIILCHSF 392 (492)
Q Consensus 338 ~lvivG~g~---~~~~~~~l~~~~~~~~~~~v~~~~~~~~~~~~~~~~~adi~v~pS~ 392 (492)
++.++++.+ +++..+..++.+++.+ .++.+. .+. .+.+..||++....+
T Consensus 182 ~v~~~~P~~~~p~~~~~~~~~~~a~~~G-~~v~~~--~d~---~eav~~aDvvytd~w 233 (333)
T 1duv_G 182 DLRLVAPQACWPEAALVTECRALAQQNG-GNITLT--EDV---AKGVEGADFIYTDVW 233 (333)
T ss_dssp EEEEECCGGGCCCHHHHHHHHHHHHHTT-CEEEEE--SCH---HHHHTTCSEEEECCS
T ss_pred EEEEECCcccCCCHHHHHHHHHHHHHcC-CeEEEE--ECH---HHHhCCCCEEEeCCc
Confidence 999998532 2234445566666653 466544 222 245799999998765
No 227
>1t5b_A Acyl carrier protein phosphodiesterase; structural genomics, FMN, alpha/beta/alpha sandwich, PSI, protein structure initiative; HET: FMN; 1.40A {Salmonella typhimurium} SCOP: c.23.5.3 PDB: 1tik_A 2z98_A* 2d5i_A* 1v4b_A* 2z9b_A* 2z9c_A* 2z9d_A*
Probab=38.43 E-value=37 Score=28.71 Aligned_cols=41 Identities=7% Similarity=-0.020 Sum_probs=30.1
Q ss_pred ceEEEEeeccccccccCcHHHHHhHHHHHHHHCC--CeEEEEeec
Q 011163 9 FHIIHICTEMDPLVSIGSLASYVTGLSGALQRKG--HLVEVILPK 51 (492)
Q Consensus 9 mkIl~v~~~~~p~~~~GG~~~~~~~l~~~L~~~G--h~V~vi~~~ 51 (492)
|||++|.. .|....|-....+..+.+++.+.| ++|.++-..
T Consensus 2 mkilii~~--S~~~~~s~t~~la~~~~~~l~~~g~~~~v~~~dl~ 44 (201)
T 1t5b_A 2 SKVLVLKS--SILAGYSQSGQLTDYFIEQWREKHVADEITVRDLA 44 (201)
T ss_dssp CEEEEEEC--CSSGGGCHHHHHHHHHHHHHHHHCTTCEEEEEETT
T ss_pred CeEEEEEe--CCCCCCChHHHHHHHHHHHHHHhCCCCeEEEEecc
Confidence 79999986 443112557777888888998876 899888754
No 228
>1e2b_A Enzyme IIB-cellobiose; phosphotransferase system, transferas transport, phosphorylation; NMR {Escherichia coli} SCOP: c.44.2.1 PDB: 1iib_A 1h9c_A* 2wwv_D 2wy2_D
Probab=38.39 E-value=67 Score=24.26 Aligned_cols=40 Identities=13% Similarity=-0.013 Sum_probs=29.8
Q ss_pred ceEEEEeeccccccccCcHHHHHhHHHHHHHHCCCeEEEEeecCCC
Q 011163 9 FHIIHICTEMDPLVSIGSLASYVTGLSGALQRKGHLVEVILPKYAC 54 (492)
Q Consensus 9 mkIl~v~~~~~p~~~~GG~~~~~~~l~~~L~~~Gh~V~vi~~~~~~ 54 (492)
+||+++|.. . -|....+..+-+.+.++|.++.+.......
T Consensus 4 kkIll~Cg~-----G-~sTS~l~~k~~~~~~~~gi~~~i~a~~~~~ 43 (106)
T 1e2b_A 4 KHIYLFSSA-----G-MSTSLLVSKMRAQAEKYEVPVIIEAFPETL 43 (106)
T ss_dssp EEEEEECSS-----S-TTTHHHHHHHHHHHHHSCCSEEEEEECSSS
T ss_pred cEEEEECCC-----c-hhHHHHHHHHHHHHHHCCCCeEEEEecHHH
Confidence 689999973 1 244567778888889999999988766544
No 229
>1tvm_A PTS system, galactitol-specific IIB component; phosphotransferase system (PTS), P-loop; NMR {Escherichia coli}
Probab=38.34 E-value=77 Score=24.20 Aligned_cols=41 Identities=17% Similarity=0.192 Sum_probs=27.9
Q ss_pred CCceEEEEeeccccccccCcHHH-HHhHHHHHHHHCCCeEEEEeecCC
Q 011163 7 NGFHIIHICTEMDPLVSIGSLAS-YVTGLSGALQRKGHLVEVILPKYA 53 (492)
Q Consensus 7 ~~mkIl~v~~~~~p~~~~GG~~~-~~~~l~~~L~~~Gh~V~vi~~~~~ 53 (492)
+.+||+++|.. .. |... ....+-+.+.+.|.++.|-+....
T Consensus 20 ~~kkIlvvC~s-----G~-gTS~ll~~kl~~~~~~~gi~~~V~~~~~~ 61 (113)
T 1tvm_A 20 SKRKIIVACGG-----AV-ATSTMAAEEIKELCQSHNIPVELIQCRVN 61 (113)
T ss_dssp SSEEEEEESCS-----CS-SHHHHHHHHHHHHHHHTTCCEEEEEECTT
T ss_pred cccEEEEECCC-----CH-HHHHHHHHHHHHHHHHcCCeEEEEEecHH
Confidence 34689999972 22 3333 467888889999999877665433
No 230
>3rqi_A Response regulator protein; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: PHD CIT; 1.70A {Burkholderia pseudomallei}
Probab=38.26 E-value=1.1e+02 Score=25.08 Aligned_cols=112 Identities=11% Similarity=-0.059 Sum_probs=63.2
Q ss_pred CcEEEEEecCCChhHHHHHHHHHHHhCCCeEEEEeccCHHHHHHHHhc--CCEEEECCC-CCCCchHHHHHhh---cCCc
Q 011163 336 GIQFVFTGTNKLPSASRALVSFQEELKDGIVIFVDSYDDALLHLIFSG--SDIILCHSF-HDPLLQVPLKALK---YGAA 409 (492)
Q Consensus 336 ~~~lvivG~g~~~~~~~~l~~~~~~~~~~~v~~~~~~~~~~~~~~~~~--adi~v~pS~-~E~~glv~lEAma---~G~P 409 (492)
..+++|+.+ ++...+.++.+.+..+ -.|.. ..+.++....+.. .|++++=-. -+.-|+-+++.+. ..+|
T Consensus 7 ~~~iLivdd--~~~~~~~l~~~L~~~g-~~v~~--~~~~~~al~~~~~~~~dlvl~D~~lp~~~g~~~~~~l~~~~~~~~ 81 (184)
T 3rqi_A 7 DKNFLVIDD--NEVFAGTLARGLERRG-YAVRQ--AHNKDEALKLAGAEKFEFITVXLHLGNDSGLSLIAPLCDLQPDAR 81 (184)
T ss_dssp CCEEEEECS--CHHHHHHHHHHHHHTT-CEEEE--ECSHHHHHHHHTTSCCSEEEECSEETTEESHHHHHHHHHHCTTCE
T ss_pred CCeEEEEcC--CHHHHHHHHHHHHHCC-CEEEE--eCCHHHHHHHHhhCCCCEEEEeccCCCccHHHHHHHHHhcCCCCC
Confidence 457777764 3445566666666542 33322 2333333334433 577776433 3445676666653 4678
Q ss_pred eEEEecCCCcccccccccccccceeeeeecCCCHHHHHHHHHHHhc
Q 011163 410 PIAVTSSDIEFRHFAEFDHESTRFSRFISSTFGNISLSQALEEIKN 455 (492)
Q Consensus 410 vV~~~~~~gg~~e~v~~~~~~~g~~G~~~~~~~~~~l~~ai~~~~~ 455 (492)
+|+... ..-.+.+... ...|..+|+..|.+.+.|..+|..++.
T Consensus 82 ii~lt~--~~~~~~~~~a-~~~Ga~~~l~KP~~~~~L~~~i~~~~~ 124 (184)
T 3rqi_A 82 ILVLTG--YASIATAVQA-VKDGADNYLAKPANVESILAALQTNAS 124 (184)
T ss_dssp EEEEES--SCCHHHHHHH-HHHTCSEEEESSCCHHHHHHHTSTTHH
T ss_pred EEEEeC--CCCHHHHHHH-HHhCHHHheeCCCCHHHHHHHHHHHHH
Confidence 877654 2222222111 114567899999999999998887654
No 231
>3dfi_A Pseudoaglycone deacetylase DBV21; single alpha-beta domain, hydrolase; 2.10A {Actinoplanes teichomyceticus}
Probab=38.20 E-value=53 Score=29.72 Aligned_cols=42 Identities=14% Similarity=0.030 Sum_probs=29.8
Q ss_pred CCceEEEEeeccccccccCcHHHHHhHHHHHHHHCCCeEEEEeecCCC
Q 011163 7 NGFHIIHICTEMDPLVSIGSLASYVTGLSGALQRKGHLVEVILPKYAC 54 (492)
Q Consensus 7 ~~mkIl~v~~~~~p~~~~GG~~~~~~~l~~~L~~~Gh~V~vi~~~~~~ 54 (492)
+.|+||+|++ +|- -....+..+...+.+.|++|.|++...+.
T Consensus 6 ~~~rvLvv~a--HPD----De~l~~GGtia~~~~~G~~V~vv~~T~Ge 47 (270)
T 3dfi_A 6 DRTRILAISP--HLD----DAVLSVGASLAQAEQDGGKVTVFTVFAGS 47 (270)
T ss_dssp CCSEEEEEES--STT----HHHHHHHHHHHHHHHTTCEEEEEESSCCC
T ss_pred CCCCEEEEEe--CCc----hHHHhhHHHHHHHHhCCCeEEEEEEeCCC
Confidence 3689999998 563 23444555556677899999999876554
No 232
>3bbn_B Ribosomal protein S2; small ribosomal subunit, spinach chloroplast ribosome, ribonucleoprotein particle, macromolecular complex; 9.40A {Spinacea oleracea} SCOP: i.1.1.1
Probab=38.17 E-value=2.1e+02 Score=25.14 Aligned_cols=28 Identities=14% Similarity=0.306 Sum_probs=21.7
Q ss_pred CCEEEECCC-CCCCchHHHHHhhcCCceEEE
Q 011163 384 SDIILCHSF-HDPLLQVPLKALKYGAAPIAV 413 (492)
Q Consensus 384 adi~v~pS~-~E~~glv~lEAma~G~PvV~~ 413 (492)
=|++++..- .| -.++.||...|.|+|+-
T Consensus 158 Pdll~v~Dp~~e--~~ai~EA~~l~IPvIai 186 (231)
T 3bbn_B 158 PDIVIIVDQQEE--YTALRECITLGIPTICL 186 (231)
T ss_dssp CSEEEESCTTTT--HHHHHHHHTTTCCEEEC
T ss_pred CCEEEEeCCccc--cHHHHHHHHhCCCEEEE
Confidence 577777654 44 37789999999999985
No 233
>2vzf_A NADH-dependent FMN reductase; oxidoreductase; 2.50A {Edta-degrading bacterium BNC1} PDB: 2vzh_A* 2vzj_A*
Probab=38.00 E-value=38 Score=28.81 Aligned_cols=39 Identities=18% Similarity=0.130 Sum_probs=30.0
Q ss_pred ceEEEEeeccccccccCcHHHHHhHHHHH-HHHCCCeEEEEee
Q 011163 9 FHIIHICTEMDPLVSIGSLASYVTGLSGA-LQRKGHLVEVILP 50 (492)
Q Consensus 9 mkIl~v~~~~~p~~~~GG~~~~~~~l~~~-L~~~Gh~V~vi~~ 50 (492)
|||++|+. .|. ..|-.......++++ +.+.|++|.++-.
T Consensus 3 mkilii~g--S~r-~~g~t~~la~~i~~~~l~~~g~~v~~~dl 42 (197)
T 2vzf_A 3 YSIVAISG--SPS-RNSTTAKLAEYALAHVLARSDSQGRHIHV 42 (197)
T ss_dssp EEEEEEEC--CSS-TTCHHHHHHHHHHHHHHHHSSEEEEEEEG
T ss_pred ceEEEEEC--CCC-CCChHHHHHHHHHHHHHHHCCCeEEEEEc
Confidence 79999886 332 235677888888898 9999999998864
No 234
>1t0i_A YLR011WP; FMN binding protein, flavodoxin, azoreductase, oxidoreductase; HET: FMN; 2.00A {Saccharomyces cerevisiae} SCOP: c.23.5.4
Probab=37.89 E-value=48 Score=27.81 Aligned_cols=40 Identities=5% Similarity=-0.032 Sum_probs=29.6
Q ss_pred ceEEEEeeccccccccCcHHHHHhHHHHHHHHC------CCeEEEEeec
Q 011163 9 FHIIHICTEMDPLVSIGSLASYVTGLSGALQRK------GHLVEVILPK 51 (492)
Q Consensus 9 mkIl~v~~~~~p~~~~GG~~~~~~~l~~~L~~~------Gh~V~vi~~~ 51 (492)
|||++|.. .|.. .|-....+..+.+.+.+. |++|.++-..
T Consensus 1 Mkilii~g--S~r~-~~~t~~la~~~~~~l~~~~~~~~~g~~v~~~dl~ 46 (191)
T 1t0i_A 1 MKVGIIMG--SVRA-KRVCPEIAAYVKRTIENSEELIDQKLKIQVVDLQ 46 (191)
T ss_dssp CEEEEEEC--CCCS-SCSHHHHHHHHHHHHHTCTTTTTTTCEEEEECHH
T ss_pred CeEEEEeC--CCCC-CCchHHHHHHHHHHHHHhhccCCCCceEEEEehh
Confidence 89999986 3431 256777778888888876 7999988643
No 235
>3rd5_A Mypaa.01249.C; ssgcid, structural genomics, seattle structural genomics CEN infectious disease, oxidoreductase; HET: EPE; 1.50A {Mycobacterium paratuberculosis}
Probab=37.84 E-value=33 Score=31.23 Aligned_cols=33 Identities=18% Similarity=0.222 Sum_probs=25.0
Q ss_pred eEEEEeeccccccccCcHHHHHhHHHHHHHHCCCeEEEEeec
Q 011163 10 HIIHICTEMDPLVSIGSLASYVTGLSGALQRKGHLVEVILPK 51 (492)
Q Consensus 10 kIl~v~~~~~p~~~~GG~~~~~~~l~~~L~~~Gh~V~vi~~~ 51 (492)
|+++||- ..||+| ..++++|.++|++|.++...
T Consensus 17 k~vlVTG------as~gIG---~~~a~~L~~~G~~V~~~~r~ 49 (291)
T 3rd5_A 17 RTVVITG------ANSGLG---AVTARELARRGATVIMAVRD 49 (291)
T ss_dssp CEEEEEC------CSSHHH---HHHHHHHHHTTCEEEEEESC
T ss_pred CEEEEeC------CCChHH---HHHHHHHHHCCCEEEEEECC
Confidence 6667774 357777 57888999999999887643
No 236
>3l4b_C TRKA K+ channel protien TM1088B; potassium channel, ring-gating complex, structural GEN PSI-2-2, protein structure initiative; HET: AMP; 3.45A {Thermotoga maritima}
Probab=37.78 E-value=33 Score=29.65 Aligned_cols=25 Identities=12% Similarity=-0.049 Sum_probs=21.1
Q ss_pred HHHHHhHHHHHHHHCCCeEEEEeec
Q 011163 27 LASYVTGLSGALQRKGHLVEVILPK 51 (492)
Q Consensus 27 ~~~~~~~l~~~L~~~Gh~V~vi~~~ 51 (492)
.|.+-..+++.|.+.||+|.++..+
T Consensus 8 ~G~~G~~la~~L~~~g~~v~vid~~ 32 (218)
T 3l4b_C 8 GETTAYYLARSMLSRKYGVVIINKD 32 (218)
T ss_dssp CHHHHHHHHHHHHHTTCCEEEEESC
T ss_pred CCHHHHHHHHHHHhCCCeEEEEECC
Confidence 3677788999999999999999854
No 237
>3iqw_A Tail-anchored protein targeting factor GET3; ATPase, Zn binding, protein transport; HET: ANP; 3.00A {Chaetomium thermophilum} PDB: 3iqx_A* 3ibg_A*
Probab=37.72 E-value=23 Score=33.33 Aligned_cols=38 Identities=13% Similarity=0.143 Sum_probs=28.9
Q ss_pred CCceEEEEeeccccccccCcHHHH--HhHHHHHHHHCCCeEEEEeec
Q 011163 7 NGFHIIHICTEMDPLVSIGSLASY--VTGLSGALQRKGHLVEVILPK 51 (492)
Q Consensus 7 ~~mkIl~v~~~~~p~~~~GG~~~~--~~~l~~~L~~~Gh~V~vi~~~ 51 (492)
+.++|++++. .||+|+. ..+|+.+|++.|.+|.++..+
T Consensus 14 ~~~~i~~~sg-------kGGvGKTt~a~~lA~~la~~g~~vllid~D 53 (334)
T 3iqw_A 14 RSLRWIFVGG-------KGGVGKTTTSCSLAIQLAKVRRSVLLLSTD 53 (334)
T ss_dssp TTCCEEEEEC-------STTSSHHHHHHHHHHHHTTSSSCEEEEECC
T ss_pred CCeEEEEEeC-------CCCccHHHHHHHHHHHHHhCCCcEEEEECC
Confidence 3467877664 3777655 567888899999999999866
No 238
>1vlv_A Otcase, ornithine carbamoyltransferase; TM1097, structural genomics, protein structure initiative, PSI, joint center for structu genomics; 2.25A {Thermotoga maritima} SCOP: c.78.1.1 c.78.1.1
Probab=37.69 E-value=2.4e+02 Score=26.19 Aligned_cols=105 Identities=16% Similarity=0.256 Sum_probs=62.9
Q ss_pred ecCCCCCCCcCCCCCcccccccCccCccChHHHHHHHHHHhCCCCCCCceEEEEEeccccccCHHHHHHHHHHHhHcCcE
Q 011163 259 APCGFDSSTWDPSNDKFLTENYCAEDMKGKTVCKVTLQQQLGLSKDASTIVVGCIFSDVSDVFLENLKAVVRGAKMRGIQ 338 (492)
Q Consensus 259 I~nGvd~~~f~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~lg~~~~~~~~~i~~~grl~~~Kg~~~li~a~~~l~~~~~~ 338 (492)
|-||-| +..+|. ..-.+--.+++.+|--. ...+.++|-. ...=...++.++..+ +++
T Consensus 138 VINa~~-~~~HPt---------------QaLaDl~Ti~e~~g~l~---gl~va~vGD~-~~rva~Sl~~~~~~~---G~~ 194 (325)
T 1vlv_A 138 VYNGLT-DEFHPT---------------QALADLMTIEENFGRLK---GVKVVFMGDT-RNNVATSLMIACAKM---GMN 194 (325)
T ss_dssp EEESCC-SSCCHH---------------HHHHHHHHHHHHHSCST---TCEEEEESCT-TSHHHHHHHHHHHHT---TCE
T ss_pred EEeCCC-CCCCcH---------------HHHHHHHHHHHHhCCcC---CcEEEEECCC-CcCcHHHHHHHHHHC---CCE
Confidence 457877 567774 11224456778887322 3678899984 122245556666555 689
Q ss_pred EEEEecCC---ChhHHHHHHHHHHHhCCCeEEEEeccCHHHHHHHHhcCCEEEECCC
Q 011163 339 FVFTGTNK---LPSASRALVSFQEELKDGIVIFVDSYDDALLHLIFSGSDIILCHSF 392 (492)
Q Consensus 339 lvivG~g~---~~~~~~~l~~~~~~~~~~~v~~~~~~~~~~~~~~~~~adi~v~pS~ 392 (492)
+.++++.+ +++..+.+++.+++.+ ..+.+. .+. .+.+..||++....+
T Consensus 195 v~~~~P~~~~p~~~~~~~~~~~a~~~G-~~v~~~--~d~---~eav~~aDvvyt~~w 245 (325)
T 1vlv_A 195 FVACGPEELKPRSDVFKRCQEIVKETD-GSVSFT--SNL---EEALAGADVVYTDVW 245 (325)
T ss_dssp EEEESCGGGCCCHHHHHHHHHHHHHHC-CEEEEE--SCH---HHHHTTCSEEEECCC
T ss_pred EEEECCccccCCHHHHHHHHHHHHHcC-CeEEEE--cCH---HHHHccCCEEEeccc
Confidence 99998532 2233345566666663 456543 232 245799999988765
No 239
>3of5_A Dethiobiotin synthetase; structural genomics, center for structural genomics of infec diseases, csgid, ligase; 1.52A {Francisella tularensis subsp}
Probab=37.53 E-value=56 Score=28.64 Aligned_cols=40 Identities=13% Similarity=0.008 Sum_probs=30.8
Q ss_pred CCceEEEEeeccccccccCcHHHHHhHHHHHHHHCCCeEEEEee
Q 011163 7 NGFHIIHICTEMDPLVSIGSLASYVTGLSGALQRKGHLVEVILP 50 (492)
Q Consensus 7 ~~mkIl~v~~~~~p~~~~GG~~~~~~~l~~~L~~~Gh~V~vi~~ 50 (492)
+.||.++|+..- ..-|-..++..|+++|.++|.+|..+=|
T Consensus 2 ~~mk~i~Itgt~----t~vGKT~vt~~L~~~l~~~G~~V~~~KP 41 (228)
T 3of5_A 2 NAMKKFFIIGTD----TEVGKTYISTKLIEVCEHQNIKSLCLKP 41 (228)
T ss_dssp TTCEEEEEEESS----SSSCHHHHHHHHHHHHHHTTCCEEEECS
T ss_pred CCCcEEEEEeCC----CCCCHHHHHHHHHHHHHHCCCeeEEecc
Confidence 458988888731 1245666888999999999999988754
No 240
>1vl8_A Gluconate 5-dehydrogenase; TM0441, structural genomics, JCSG structure initiative, PSI, joint center for structural GENO oxidoreductase; HET: NAP; 2.07A {Thermotoga maritima} SCOP: c.2.1.2
Probab=37.26 E-value=38 Score=30.37 Aligned_cols=34 Identities=18% Similarity=0.164 Sum_probs=25.2
Q ss_pred ceEEEEeeccccccccCcHHHHHhHHHHHHHHCCCeEEEEeec
Q 011163 9 FHIIHICTEMDPLVSIGSLASYVTGLSGALQRKGHLVEVILPK 51 (492)
Q Consensus 9 mkIl~v~~~~~p~~~~GG~~~~~~~l~~~L~~~Gh~V~vi~~~ 51 (492)
.|+++||- ..||+| ..+++.|.++|++|.++...
T Consensus 21 ~k~~lVTG------as~gIG---~~ia~~l~~~G~~V~~~~r~ 54 (267)
T 1vl8_A 21 GRVALVTG------GSRGLG---FGIAQGLAEAGCSVVVASRN 54 (267)
T ss_dssp TCEEEEET------TTSHHH---HHHHHHHHHTTCEEEEEESC
T ss_pred CCEEEEEC------CCCHHH---HHHHHHHHHCCCEEEEEeCC
Confidence 47777774 357777 46788899999999887643
No 241
>3cwq_A Para family chromosome partitioning protein; alpha-beta protein, structural genomics, PSI-2, protein STRU initiative; HET: ADP; 2.47A {Synechocystis SP}
Probab=36.86 E-value=28 Score=30.02 Aligned_cols=26 Identities=23% Similarity=0.218 Sum_probs=20.7
Q ss_pred CcHH--HHHhHHHHHHHHCCCeEEEEeec
Q 011163 25 GSLA--SYVTGLSGALQRKGHLVEVILPK 51 (492)
Q Consensus 25 GG~~--~~~~~l~~~L~~~Gh~V~vi~~~ 51 (492)
||+| +.+.+|+.+|+++| +|.++=.+
T Consensus 10 GGvGKTT~a~~LA~~la~~g-~VlliD~D 37 (209)
T 3cwq_A 10 GGVGKTTTAVHLSAYLALQG-ETLLIDGD 37 (209)
T ss_dssp TTSSHHHHHHHHHHHHHTTS-CEEEEEEC
T ss_pred CCCcHHHHHHHHHHHHHhcC-CEEEEECC
Confidence 6666 56678999999999 99888554
No 242
>3rpe_A MDAB, modulator of drug activity B; structural genomics, center for structural genomics of infec diseases, csgid, flavodoxin-like fold; HET: FAD; 1.10A {Yersinia pestis}
Probab=36.81 E-value=52 Score=28.72 Aligned_cols=42 Identities=19% Similarity=0.196 Sum_probs=28.2
Q ss_pred CceEEEEeecccccc--ccCcHH-HHHhHHHHHHHHCCCeEEEEeec
Q 011163 8 GFHIIHICTEMDPLV--SIGSLA-SYVTGLSGALQRKGHLVEVILPK 51 (492)
Q Consensus 8 ~mkIl~v~~~~~p~~--~~GG~~-~~~~~l~~~L~~~Gh~V~vi~~~ 51 (492)
.||||+|.. +|.. ..|+.. ..+..+.+.+.+.||+|.++-+.
T Consensus 25 M~kiLiI~g--sp~~~~s~~s~n~~L~~~~~~~l~~~g~ev~~~dL~ 69 (218)
T 3rpe_A 25 MSNVLIINA--MKEFAHSKGALNLTLTNVAADFLRESGHQVKITTVD 69 (218)
T ss_dssp CCCEEEEEC--CCCBTTBCSHHHHHHHHHHHHHHHHTTCCEEEEEGG
T ss_pred CcceEEEEe--CCCcccCCChHHHHHHHHHHHHHhhCCCEEEEEECC
Confidence 369999986 4421 124444 45556677777899999988764
No 243
>3ph3_A Ribose-5-phosphate isomerase; alpha-beta-alpha sandwich fold; HET: RB5; 2.07A {Clostridium thermocellum} SCOP: c.121.1.1 PDB: 3ph4_A*
Probab=35.94 E-value=46 Score=27.69 Aligned_cols=37 Identities=14% Similarity=0.063 Sum_probs=25.7
Q ss_pred CCCceEEEEeeccccccccCcHHHHHhHHHHHHHHCCCeEEEEee
Q 011163 6 RNGFHIIHICTEMDPLVSIGSLASYVTGLSGALQRKGHLVEVILP 50 (492)
Q Consensus 6 ~~~mkIl~v~~~~~p~~~~GG~~~~~~~l~~~L~~~Gh~V~vi~~ 50 (492)
+++|||++-++. +|.+ +=..|...|.++||+|.=+.+
T Consensus 18 ~~~MkIaIgsDh-------aG~~-lK~~i~~~L~~~G~eV~D~G~ 54 (169)
T 3ph3_A 18 GSHMKIGIGSDH-------GGYN-LKREIADFLKKRGYEVIDFGT 54 (169)
T ss_dssp ---CEEEEEECG-------GGHH-HHHHHHHHHHHTTCEEEECCC
T ss_pred CCCCEEEEEeCc-------hHHH-HHHHHHHHHHHCCCEEEEcCC
Confidence 466999887763 5655 455788889999999976654
No 244
>3cg0_A Response regulator receiver modulated diguanylate with PAS/PAC sensor; signal receiver domain, diguanylate cyclase; 2.15A {Desulfovibrio desulfuricans subsp}
Probab=35.92 E-value=1.4e+02 Score=22.61 Aligned_cols=113 Identities=13% Similarity=-0.078 Sum_probs=63.0
Q ss_pred CcEEEEEecCCChhHHHHHHHHHHHhCCCeEEEEeccCHHHHHHHH--hcCCEEEECCCC--CCCchHHHHHhh--cCCc
Q 011163 336 GIQFVFTGTNKLPSASRALVSFQEELKDGIVIFVDSYDDALLHLIF--SGSDIILCHSFH--DPLLQVPLKALK--YGAA 409 (492)
Q Consensus 336 ~~~lvivG~g~~~~~~~~l~~~~~~~~~~~v~~~~~~~~~~~~~~~--~~adi~v~pS~~--E~~glv~lEAma--~G~P 409 (492)
..+++|+.+ ++...+.++...+..+ -.+... ..+.++....+ ...|++++-... +.-|+-+++.+. ..+|
T Consensus 9 ~~~iLivdd--~~~~~~~l~~~L~~~g-~~v~~~-~~~~~~a~~~~~~~~~dlii~d~~~~~~~~g~~~~~~l~~~~~~~ 84 (140)
T 3cg0_A 9 LPGVLIVED--GRLAAATLRIQLESLG-YDVLGV-FDNGEEAVRCAPDLRPDIALVDIMLCGALDGVETAARLAAGCNLP 84 (140)
T ss_dssp CCEEEEECC--BHHHHHHHHHHHHHHT-CEEEEE-ESSHHHHHHHHHHHCCSEEEEESSCCSSSCHHHHHHHHHHHSCCC
T ss_pred CceEEEEEC--CHHHHHHHHHHHHHCC-CeeEEE-ECCHHHHHHHHHhCCCCEEEEecCCCCCCCHHHHHHHHHhCCCCC
Confidence 467777763 2445556666655542 333311 22222222222 246887775443 345666665554 4788
Q ss_pred eEEEecCCCcccccccccccccceeeeeecCCCHHHHHHHHHHHhc
Q 011163 410 PIAVTSSDIEFRHFAEFDHESTRFSRFISSTFGNISLSQALEEIKN 455 (492)
Q Consensus 410 vV~~~~~~gg~~e~v~~~~~~~g~~G~~~~~~~~~~l~~ai~~~~~ 455 (492)
+|+... ..-.+.+... ...|..+++..|.+.+.|..+|..+++
T Consensus 85 ii~ls~--~~~~~~~~~~-~~~g~~~~l~kp~~~~~l~~~i~~~~~ 127 (140)
T 3cg0_A 85 IIFITS--SQDVETFQRA-KRVNPFGYLAKPVAADTLHRSIEMAIH 127 (140)
T ss_dssp EEEEEC--CCCHHHHHHH-HTTCCSEEEEESCCHHHHHHHHHHHHH
T ss_pred EEEEec--CCCHHHHHHH-HhcCCCEEEeCCCCHHHHHHHHHHHHh
Confidence 887654 2222222111 114567899999999999999988764
No 245
>3r6w_A FMN-dependent NADH-azoreductase 1; nitrofurazone, P. aeruginosa, nitroreductase, flavodoxin, oxidoreductase; HET: FMN NFZ; 2.08A {Pseudomonas aeruginosa} PDB: 3lt5_A* 2v9c_A* 3keg_A*
Probab=35.79 E-value=37 Score=29.21 Aligned_cols=41 Identities=10% Similarity=-0.041 Sum_probs=29.0
Q ss_pred ceEEEEeeccccccccCcHHHHHhHHHHHHHHC--CCeEEEEeec
Q 011163 9 FHIIHICTEMDPLVSIGSLASYVTGLSGALQRK--GHLVEVILPK 51 (492)
Q Consensus 9 mkIl~v~~~~~p~~~~GG~~~~~~~l~~~L~~~--Gh~V~vi~~~ 51 (492)
||||+|.. .|....|=.......+.+++.+. |++|.++-..
T Consensus 2 mkiLii~g--Spr~~~s~t~~l~~~~~~~~~~~~~g~~v~~~dL~ 44 (212)
T 3r6w_A 2 SRILAVHA--SPRGERSQSRRLAEVFLAAYREAHPQARVARREVG 44 (212)
T ss_dssp CCEEEEEC--CSCSTTCHHHHHHHHHHHHHHHHCTTCCEEEEESS
T ss_pred CEEEEEEe--CCCCCCCHHHHHHHHHHHHHHHhCCCCeEEEEECC
Confidence 79999986 44311123566677788888887 9999998754
No 246
>1ks9_A KPA reductase;, 2-dehydropantoate 2-reductase; PANE, APBA, ketopantoate reductase, rossman fold, monomer, APO, oxidoreductase; 1.70A {Escherichia coli} SCOP: a.100.1.7 c.2.1.6 PDB: 1yon_A* 1yjq_A* 2ofp_A*
Probab=35.61 E-value=33 Score=30.99 Aligned_cols=32 Identities=28% Similarity=0.285 Sum_probs=23.8
Q ss_pred ceEEEEeeccccccccCcHHHHHhHHHHHHHHCCCeEEEEeec
Q 011163 9 FHIIHICTEMDPLVSIGSLASYVTGLSGALQRKGHLVEVILPK 51 (492)
Q Consensus 9 mkIl~v~~~~~p~~~~GG~~~~~~~l~~~L~~~Gh~V~vi~~~ 51 (492)
|||++|.. |.+| ..++..|.+.||+|+++...
T Consensus 1 m~i~iiG~--------G~~G---~~~a~~l~~~g~~V~~~~r~ 32 (291)
T 1ks9_A 1 MKITVLGC--------GALG---QLWLTALCKQGHEVQGWLRV 32 (291)
T ss_dssp CEEEEECC--------SHHH---HHHHHHHHHTTCEEEEECSS
T ss_pred CeEEEECc--------CHHH---HHHHHHHHhCCCCEEEEEcC
Confidence 78887653 5555 46778899999999998654
No 247
>1pvv_A Otcase, ornithine carbamoyltransferase; dodecamer; 1.87A {Pyrococcus furiosus} SCOP: c.78.1.1 c.78.1.1 PDB: 1a1s_A
Probab=35.59 E-value=1.9e+02 Score=26.73 Aligned_cols=104 Identities=13% Similarity=0.050 Sum_probs=0.0
Q ss_pred ecCCCCCCCcCCCCCcccccccCccCccChHHHHHHHHHHhCCCCCCCceEEEEEeccccccCHHHHHHHHHHHhHcCcE
Q 011163 259 APCGFDSSTWDPSNDKFLTENYCAEDMKGKTVCKVTLQQQLGLSKDASTIVVGCIFSDVSDVFLENLKAVVRGAKMRGIQ 338 (492)
Q Consensus 259 I~nGvd~~~f~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~lg~~~~~~~~~i~~~grl~~~Kg~~~li~a~~~l~~~~~~ 338 (492)
|-||-| +..+|. ..-.+--.+++++|--.+ ..+.++|-. ..=...++.++..+ +++
T Consensus 126 VINa~~-~~~HPt---------------QaLaDl~Ti~e~~g~l~g---l~va~vGD~--~rva~Sl~~~~~~~---g~~ 181 (315)
T 1pvv_A 126 VINGLS-DFSHPC---------------QALADYMTIWEKKGTIKG---VKVVYVGDG--NNVAHSLMIAGTKL---GAD 181 (315)
T ss_dssp EEEEEC-SSCCHH---------------HHHHHHHHHHHHHSCCTT---CEEEEESCC--CHHHHHHHHHHHHT---TCE
T ss_pred EEcCCC-CCCCcH---------------HHHHHHHHHHHHhCCcCC---cEEEEECCC--cchHHHHHHHHHHC---CCE
Q ss_pred EEEEecC---CChhHHHHHHHHHHHhCCCeEEEEeccCHHHHHHHHhcCCEEEECCC
Q 011163 339 FVFTGTN---KLPSASRALVSFQEELKDGIVIFVDSYDDALLHLIFSGSDIILCHSF 392 (492)
Q Consensus 339 lvivG~g---~~~~~~~~l~~~~~~~~~~~v~~~~~~~~~~~~~~~~~adi~v~pS~ 392 (492)
+.++++. ++++..+.+++.+++.+ ..+... +...+.+..||++....+
T Consensus 182 v~~~~P~~~~~~~~~~~~~~~~a~~~g-~~~~~~-----~d~~eav~~aDvvy~~~w 232 (315)
T 1pvv_A 182 VVVATPEGYEPDEKVIKWAEQNAAESG-GSFELL-----HDPVKAVKDADVIYTDVW 232 (315)
T ss_dssp EEEECCTTCCCCHHHHHHHHHHHHHHT-CEEEEE-----SCHHHHTTTCSEEEECCC
T ss_pred EEEECCccccCCHHHHHHHHHHHHHcC-CeEEEE-----eCHHHHhCCCCEEEEcce
No 248
>3lte_A Response regulator; structural genomics, PSI, protein structure initiative, NYSG YORK structural genomix research consortium, nysgxrc; 2.00A {Bermanella marisrubri}
Probab=35.56 E-value=1.4e+02 Score=22.41 Aligned_cols=113 Identities=10% Similarity=-0.001 Sum_probs=61.0
Q ss_pred CcEEEEEecCCChhHHHHHHHHHHHhCCCeEEEEeccCHHHHHHHH--hcCCEEEECCC-CCCCchHHHHHhhc----CC
Q 011163 336 GIQFVFTGTNKLPSASRALVSFQEELKDGIVIFVDSYDDALLHLIF--SGSDIILCHSF-HDPLLQVPLKALKY----GA 408 (492)
Q Consensus 336 ~~~lvivG~g~~~~~~~~l~~~~~~~~~~~v~~~~~~~~~~~~~~~--~~adi~v~pS~-~E~~glv~lEAma~----G~ 408 (492)
..+++|+.+ ++...+.++...++.+ -.|.. ..+.++....+ ...|++++-.. -+.-|+.+++.+.. ..
T Consensus 6 ~~~ilivdd--~~~~~~~l~~~L~~~g-~~v~~--~~~~~~a~~~l~~~~~dlii~d~~l~~~~g~~~~~~l~~~~~~~~ 80 (132)
T 3lte_A 6 SKRILVVDD--DQAMAAAIERVLKRDH-WQVEI--AHNGFDAGIKLSTFEPAIMTLDLSMPKLDGLDVIRSLRQNKVANQ 80 (132)
T ss_dssp -CEEEEECS--CHHHHHHHHHHHHHTT-CEEEE--ESSHHHHHHHHHHTCCSEEEEESCBTTBCHHHHHHHHHTTTCSSC
T ss_pred CccEEEEEC--CHHHHHHHHHHHHHCC-cEEEE--eCCHHHHHHHHHhcCCCEEEEecCCCCCCHHHHHHHHHhcCccCC
Confidence 356777763 3445556666655542 34432 22333322232 34677776544 34567777777643 23
Q ss_pred ceEEEecCCCcccccccccccccceeeeeecCCCHHHHHHHHHHHhcC
Q 011163 409 APIAVTSSDIEFRHFAEFDHESTRFSRFISSTFGNISLSQALEEIKNN 456 (492)
Q Consensus 409 PvV~~~~~~gg~~e~v~~~~~~~g~~G~~~~~~~~~~l~~ai~~~~~~ 456 (492)
|+|+.-. +.-.+.+.. ....|..+|+..|.+.+.|.++|......
T Consensus 81 ~~ii~~~--~~~~~~~~~-~~~~g~~~~l~kP~~~~~l~~~i~~~~~~ 125 (132)
T 3lte_A 81 PKILVVS--GLDKAKLQQ-AVTEGADDYLEKPFDNDALLDRIHDLVNE 125 (132)
T ss_dssp CEEEEEC--CSCSHHHHH-HHHHTCCEEECSSCCHHHHHHHHHHHHC-
T ss_pred CeEEEEe--CCChHHHHH-HHHhChHHHhhCCCCHHHHHHHHHHHcCC
Confidence 3443333 222222211 11135678999999999999999988653
No 249
>1bg6_A N-(1-D-carboxylethyl)-L-norvaline dehydrogenase; L) stereospecific opine dehydrogenase, oxidoreductase; 1.80A {Arthrobacter SP} SCOP: a.100.1.5 c.2.1.6
Probab=35.51 E-value=33 Score=32.21 Aligned_cols=32 Identities=16% Similarity=-0.016 Sum_probs=24.0
Q ss_pred CceEEEEeeccccccccCcHHHHHhHHHHHHHHCCCeEEEEee
Q 011163 8 GFHIIHICTEMDPLVSIGSLASYVTGLSGALQRKGHLVEVILP 50 (492)
Q Consensus 8 ~mkIl~v~~~~~p~~~~GG~~~~~~~l~~~L~~~Gh~V~vi~~ 50 (492)
.|||++|.. |.+|.. ++..|.+.||+|.++..
T Consensus 4 ~mki~iiG~--------G~~G~~---~a~~L~~~g~~V~~~~r 35 (359)
T 1bg6_A 4 SKTYAVLGL--------GNGGHA---FAAYLALKGQSVLAWDI 35 (359)
T ss_dssp CCEEEEECC--------SHHHHH---HHHHHHHTTCEEEEECS
T ss_pred cCeEEEECC--------CHHHHH---HHHHHHhCCCEEEEEeC
Confidence 389998764 666644 56778899999988754
No 250
>1lld_A L-lactate dehydrogenase; oxidoreductase(CHOH (D)-NAD (A)); HET: NAD; 2.00A {Bifidobacterium longum subsp} SCOP: c.2.1.5 d.162.1.1 PDB: 1lth_T*
Probab=35.39 E-value=34 Score=31.65 Aligned_cols=35 Identities=17% Similarity=0.083 Sum_probs=24.9
Q ss_pred CCCceEEEEeeccccccccCcHHHHHhHHHHHHHHCCC--eEEEEeec
Q 011163 6 RNGFHIIHICTEMDPLVSIGSLASYVTGLSGALQRKGH--LVEVILPK 51 (492)
Q Consensus 6 ~~~mkIl~v~~~~~p~~~~GG~~~~~~~l~~~L~~~Gh--~V~vi~~~ 51 (492)
.+.|||++|.. |.+|.. ++..|.+.|| +|.++...
T Consensus 5 ~~~mkI~IiGa--------G~vG~~---~a~~l~~~g~~~~V~l~d~~ 41 (319)
T 1lld_A 5 VKPTKLAVIGA--------GAVGST---LAFAAAQRGIAREIVLEDIA 41 (319)
T ss_dssp --CCEEEEECC--------SHHHHH---HHHHHHHTTCCSEEEEECSS
T ss_pred CCCCEEEEECC--------CHHHHH---HHHHHHhCCCCCEEEEEeCC
Confidence 44589998764 666655 6778889999 99887653
No 251
>1k66_A Phytochrome response regulator RCPB; CHEY homologue, homodimer, APO-protein, (beta/alpha)5, signaling protein; 1.75A {Tolypothrix SP} SCOP: c.23.1.1
Probab=35.21 E-value=1.5e+02 Score=22.69 Aligned_cols=112 Identities=9% Similarity=-0.039 Sum_probs=65.0
Q ss_pred CcEEEEEecCCChhHHHHHHHHHHHhCCC-eEEEEeccCHHHHHHHHh------------cCCEEEECCC-CCCCchHHH
Q 011163 336 GIQFVFTGTNKLPSASRALVSFQEELKDG-IVIFVDSYDDALLHLIFS------------GSDIILCHSF-HDPLLQVPL 401 (492)
Q Consensus 336 ~~~lvivG~g~~~~~~~~l~~~~~~~~~~-~v~~~~~~~~~~~~~~~~------------~adi~v~pS~-~E~~glv~l 401 (492)
..+++|+.+ ++...+.++...+..+.. .+... .+.++....+. ..|++++=.. -+.-|+-++
T Consensus 6 ~~~iLivdd--~~~~~~~l~~~L~~~g~~~~v~~~--~~~~~al~~l~~~~~~~~~~~~~~~dlvi~D~~l~~~~g~~~~ 81 (149)
T 1k66_A 6 TQPLLVVED--SDEDFSTFQRLLQREGVVNPIYRC--ITGDQALDFLYQTGSYCNPDIAPRPAVILLDLNLPGTDGREVL 81 (149)
T ss_dssp TSCEEEECC--CHHHHHHHHHHHHHTTBCSCEEEE--CSHHHHHHHHHTCCSSSCGGGCCCCSEEEECSCCSSSCHHHHH
T ss_pred CccEEEEEC--CHHHHHHHHHHHHHcCCCceEEEE--CCHHHHHHHHHhcccccCcccCCCCcEEEEECCCCCCCHHHHH
Confidence 456777763 345556666666665311 44432 23333334443 4688887544 344677777
Q ss_pred HHhh-----cCCceEEEecCCCcccccccccccccceeeeeecCCCHHHHHHHHHHHh
Q 011163 402 KALK-----YGAAPIAVTSSDIEFRHFAEFDHESTRFSRFISSTFGNISLSQALEEIK 454 (492)
Q Consensus 402 EAma-----~G~PvV~~~~~~gg~~e~v~~~~~~~g~~G~~~~~~~~~~l~~ai~~~~ 454 (492)
+.+. ..+|+|+... ..-.+.+... ...|..+++..|.+.+.|.++|..++
T Consensus 82 ~~l~~~~~~~~~~ii~~t~--~~~~~~~~~~-~~~g~~~~l~kP~~~~~l~~~i~~~~ 136 (149)
T 1k66_A 82 QEIKQDEVLKKIPVVIMTT--SSNPKDIEIC-YSYSISSYIVKPLEIDRLTETVQTFI 136 (149)
T ss_dssp HHHTTSTTGGGSCEEEEES--CCCHHHHHHH-HHTTCSEEEECCSSHHHHHHHHHHHH
T ss_pred HHHHhCcccCCCeEEEEeC--CCCHHHHHHH-HHCCCCEEEeCCCCHHHHHHHHHHHH
Confidence 7764 4567777654 2222222111 11456789999999999999998875
No 252
>1sqs_A Conserved hypothetical protein; structural genomics, alpha beta protein, PSI, protein struct initiative; HET: TLA; 1.50A {Streptococcus pneumoniae} SCOP: c.23.5.5 PDB: 2oys_A*
Probab=34.96 E-value=43 Score=29.57 Aligned_cols=40 Identities=13% Similarity=0.036 Sum_probs=30.6
Q ss_pred ceEEEEeeccccccccCcHHHHHhHHHHHHHHC-CCeEEEEeec
Q 011163 9 FHIIHICTEMDPLVSIGSLASYVTGLSGALQRK-GHLVEVILPK 51 (492)
Q Consensus 9 mkIl~v~~~~~p~~~~GG~~~~~~~l~~~L~~~-Gh~V~vi~~~ 51 (492)
|||++|.. .|. ..|-....+..+++++.+. |++|.++-..
T Consensus 2 mkIliI~g--S~r-~~s~T~~la~~i~~~l~~~~g~~v~~~dl~ 42 (242)
T 1sqs_A 2 NKIFIYAG--VRN-HNSKTLEYTKRLSSIISSRNNVDISFRTPF 42 (242)
T ss_dssp CEEEEEEC--CCC-TTCHHHHHHHHHHHHHHHHSCCEEEEECTT
T ss_pred CeEEEEEC--CCC-CCChHHHHHHHHHHHHHHhcCCeEEEEEcc
Confidence 79999986 443 2356778888889999888 9999888653
No 253
>2pk3_A GDP-6-deoxy-D-LYXO-4-hexulose reductase; SDR, short-chain dehydrogenase/reductase, rossmann fold, oxidoreductase; HET: A2R GDD; 1.82A {Aneurinibacillus thermoaerophilus}
Probab=34.87 E-value=39 Score=30.98 Aligned_cols=25 Identities=16% Similarity=0.016 Sum_probs=19.0
Q ss_pred cCcHHHHHhHHHHHHHHCCCeEEEEeec
Q 011163 24 IGSLASYVTGLSGALQRKGHLVEVILPK 51 (492)
Q Consensus 24 ~GG~~~~~~~l~~~L~~~Gh~V~vi~~~ 51 (492)
.|++| ..+++.|.++||+|.++...
T Consensus 21 tG~iG---~~l~~~L~~~G~~V~~~~r~ 45 (321)
T 2pk3_A 21 AGFVG---KYLANHLTEQNVEVFGTSRN 45 (321)
T ss_dssp TSHHH---HHHHHHHHHTTCEEEEEESC
T ss_pred CChHH---HHHHHHHHHCCCEEEEEecC
Confidence 45555 56778899999999987654
No 254
>2m1z_A LMO0427 protein; homolog PTS system IIB component, transferase; NMR {Listeria monocytogenes egd-e}
Probab=34.75 E-value=76 Score=24.10 Aligned_cols=40 Identities=20% Similarity=0.315 Sum_probs=27.9
Q ss_pred CceEEEEeeccccccccCcHHHHH--hHHHHHHHHCCCeEEEEeecC
Q 011163 8 GFHIIHICTEMDPLVSIGSLASYV--TGLSGALQRKGHLVEVILPKY 52 (492)
Q Consensus 8 ~mkIl~v~~~~~p~~~~GG~~~~~--~~l~~~L~~~Gh~V~vi~~~~ 52 (492)
.|||+.|+. + | .|=..+|+ ..|-++-.++||++.|-+-..
T Consensus 2 ~mkivaVta-C-p---tGiAhTymAAeaLekaA~~~G~~ikVEtqgs 43 (106)
T 2m1z_A 2 KRKIIAVTA-C-A---TGVAHTYMAAQALKKGAKKMGNLIKVETQGA 43 (106)
T ss_dssp CCEEEEEEE-C-S---SCHHHHHHHHHHHHHHHHHHTCEEEEEEEET
T ss_pred CccEEEEEE-C-C---CcHHHHHHHHHHHHHHHHHCCCEEEEEEecC
Confidence 489999976 2 2 25455554 357777778999999998653
No 255
>3f6p_A Transcriptional regulatory protein YYCF; unphosphorelated, receiver domain, cytoplasm, DNA-binding, phosphoprotein, transcription regulation; 1.95A {Bacillus subtilis} SCOP: c.23.1.1 PDB: 2zwm_A
Probab=34.71 E-value=1.4e+02 Score=22.13 Aligned_cols=111 Identities=10% Similarity=0.005 Sum_probs=60.8
Q ss_pred cEEEEEecCCChhHHHHHHHHHHHhCCCeEEEEeccCHHHHHHHHh--cCCEEEECCC-CCCCchHHHHHhh--cCCceE
Q 011163 337 IQFVFTGTNKLPSASRALVSFQEELKDGIVIFVDSYDDALLHLIFS--GSDIILCHSF-HDPLLQVPLKALK--YGAAPI 411 (492)
Q Consensus 337 ~~lvivG~g~~~~~~~~l~~~~~~~~~~~v~~~~~~~~~~~~~~~~--~adi~v~pS~-~E~~glv~lEAma--~G~PvV 411 (492)
.+++|+.+ ++...+.++...+..+ -.+.. ..+.++....+. ..|++++=.. -+.-|+-+++.+. ..+|+|
T Consensus 3 ~~ilivdd--~~~~~~~l~~~L~~~g-~~v~~--~~~~~~al~~~~~~~~dlii~D~~~p~~~g~~~~~~lr~~~~~~ii 77 (120)
T 3f6p_A 3 KKILVVDD--EKPIADILEFNLRKEG-YEVHC--AHDGNEAVEMVEELQPDLILLDIMLPNKDGVEVCREVRKKYDMPII 77 (120)
T ss_dssp CEEEEECS--CHHHHHHHHHHHHHTT-CEEEE--ESSHHHHHHHHHTTCCSEEEEETTSTTTHHHHHHHHHHTTCCSCEE
T ss_pred CeEEEEEC--CHHHHHHHHHHHHhCC-EEEEE--eCCHHHHHHHHhhCCCCEEEEeCCCCCCCHHHHHHHHHhcCCCCEE
Confidence 35667763 2344555665555542 33432 233333333332 3577776433 3445666665543 467777
Q ss_pred EEecCCCcccccccccccccceeeeeecCCCHHHHHHHHHHHhc
Q 011163 412 AVTSSDIEFRHFAEFDHESTRFSRFISSTFGNISLSQALEEIKN 455 (492)
Q Consensus 412 ~~~~~~gg~~e~v~~~~~~~g~~G~~~~~~~~~~l~~ai~~~~~ 455 (492)
+... ..-.+..... ...|..+|+..|.+.+.|..+++.++.
T Consensus 78 ~~t~--~~~~~~~~~~-~~~ga~~~l~KP~~~~~l~~~i~~~l~ 118 (120)
T 3f6p_A 78 MLTA--KDSEIDKVIG-LEIGADDYVTKPFSTRELLARVKANLR 118 (120)
T ss_dssp EEEE--SSCHHHHHHH-HHTTCCEEEEESCCHHHHHHHHHHHHT
T ss_pred EEEC--CCChHHHHHH-HhCCcceeEcCCCCHHHHHHHHHHHHh
Confidence 6554 2222221110 114667899999999999999988754
No 256
>2ydy_A Methionine adenosyltransferase 2 subunit beta; oxidoreductase; 2.25A {Homo sapiens} PDB: 2ydx_A
Probab=34.70 E-value=29 Score=31.84 Aligned_cols=32 Identities=9% Similarity=-0.005 Sum_probs=22.2
Q ss_pred ceEEEEeeccccccccCcHHHHHhHHHHHHHHCCCeEEEEee
Q 011163 9 FHIIHICTEMDPLVSIGSLASYVTGLSGALQRKGHLVEVILP 50 (492)
Q Consensus 9 mkIl~v~~~~~p~~~~GG~~~~~~~l~~~L~~~Gh~V~vi~~ 50 (492)
|+|+++. ..|++| ..+++.|.++||+|.++..
T Consensus 3 ~~vlVtG-------atG~iG---~~l~~~L~~~g~~V~~~~r 34 (315)
T 2ydy_A 3 RRVLVTG-------ATGLLG---RAVHKEFQQNNWHAVGCGF 34 (315)
T ss_dssp CEEEEET-------TTSHHH---HHHHHHHHTTTCEEEEEC-
T ss_pred CeEEEEC-------CCcHHH---HHHHHHHHhCCCeEEEEcc
Confidence 6775533 236666 4567889999999998874
No 257
>3k96_A Glycerol-3-phosphate dehydrogenase [NAD(P)+]; GPSA, IDP01976, oxidoreductase, phospholipid biosynthesis; HET: EPE; 2.10A {Coxiella burnetii}
Probab=34.68 E-value=31 Score=32.78 Aligned_cols=34 Identities=29% Similarity=0.263 Sum_probs=25.3
Q ss_pred CCceEEEEeeccccccccCcHHHHHhHHHHHHHHCCCeEEEEeec
Q 011163 7 NGFHIIHICTEMDPLVSIGSLASYVTGLSGALQRKGHLVEVILPK 51 (492)
Q Consensus 7 ~~mkIl~v~~~~~p~~~~GG~~~~~~~l~~~L~~~Gh~V~vi~~~ 51 (492)
..|||++|.. |.+| ..++..|++.||+|.++...
T Consensus 28 ~~mkI~VIGa--------G~mG---~alA~~La~~G~~V~l~~r~ 61 (356)
T 3k96_A 28 FKHPIAILGA--------GSWG---TALALVLARKGQKVRLWSYE 61 (356)
T ss_dssp CCSCEEEECC--------SHHH---HHHHHHHHTTTCCEEEECSC
T ss_pred cCCeEEEECc--------cHHH---HHHHHHHHHCCCeEEEEeCC
Confidence 4589988764 4444 45778899999999988753
No 258
>1d4a_A DT-diaphorase, quinone reductase; flavoprotein, rossman fold, oxidoreductase; HET: FAD; 1.70A {Homo sapiens} SCOP: c.23.5.3 PDB: 1dxo_A* 1gg5_A* 1kbo_A* 1kbq_A* 2f1o_A* 3jsx_A* 1h69_A* 1h66_A* 1qbg_A* 1dxq_A* 1qrd_A*
Probab=34.52 E-value=52 Score=29.76 Aligned_cols=39 Identities=15% Similarity=-0.022 Sum_probs=28.6
Q ss_pred ceEEEEeeccccccccCc-HHHHHhHHHHHHHHCCCeEEEEeec
Q 011163 9 FHIIHICTEMDPLVSIGS-LASYVTGLSGALQRKGHLVEVILPK 51 (492)
Q Consensus 9 mkIl~v~~~~~p~~~~GG-~~~~~~~l~~~L~~~Gh~V~vi~~~ 51 (492)
||||+|.. +|. .+| .......+.++|.+.||+|.++-..
T Consensus 3 mkiLiI~g--Spr--~~s~t~~la~~~~~~l~~~g~eV~~~dL~ 42 (273)
T 1d4a_A 3 RRALIVLA--HSE--RTSFNYAMKEAAAAALKKKGWEVVESDLY 42 (273)
T ss_dssp CEEEEEEC--CSC--TTSHHHHHHHHHHHHHHHTTCEEEEEETT
T ss_pred CEEEEEEe--CCC--CccHHHHHHHHHHHHHHhCCCeEEEEEcc
Confidence 79999986 453 234 4556666777888899999998754
No 259
>1fmc_A 7 alpha-hydroxysteroid dehydrogenase; short-chain dehydrogenase/reductase, bIle acid catabolism, oxidoreductase; HET: CHO NAD; 1.80A {Escherichia coli} SCOP: c.2.1.2 PDB: 1ahi_A* 1ahh_A*
Probab=34.48 E-value=35 Score=30.09 Aligned_cols=24 Identities=13% Similarity=0.008 Sum_probs=18.8
Q ss_pred cCcHHHHHhHHHHHHHHCCCeEEEEee
Q 011163 24 IGSLASYVTGLSGALQRKGHLVEVILP 50 (492)
Q Consensus 24 ~GG~~~~~~~l~~~L~~~Gh~V~vi~~ 50 (492)
.||+| ..+++.|.++|++|.++..
T Consensus 20 sggiG---~~la~~l~~~G~~V~~~~r 43 (255)
T 1fmc_A 20 GAGIG---KEIAITFATAGASVVVSDI 43 (255)
T ss_dssp TSHHH---HHHHHHHHTTTCEEEEEES
T ss_pred ccHHH---HHHHHHHHHCCCEEEEEcC
Confidence 46666 4678899999999988764
No 260
>1gsa_A Glutathione synthetase; ligase; HET: ADP GSH; 2.00A {Escherichia coli} SCOP: c.30.1.3 d.142.1.1 PDB: 1gsh_A 2glt_A 1glv_A
Probab=34.42 E-value=45 Score=30.42 Aligned_cols=40 Identities=10% Similarity=0.064 Sum_probs=28.0
Q ss_pred ceEEEEeeccccccccCcHHHHHhHHHHHHHHCCCeEEEEeec
Q 011163 9 FHIIHICTEMDPLVSIGSLASYVTGLSGALQRKGHLVEVILPK 51 (492)
Q Consensus 9 mkIl~v~~~~~p~~~~GG~~~~~~~l~~~L~~~Gh~V~vi~~~ 51 (492)
|||++++...... .... .....+++++.++||+|.++.+.
T Consensus 2 m~i~il~~~~~~~-~~~~--~s~~~l~~a~~~~G~~v~~~d~~ 41 (316)
T 1gsa_A 2 IKLGIVMDPIANI-NIKK--DSSFAMLLEAQRRGYELHYMEMG 41 (316)
T ss_dssp CEEEEECSCGGGC-CTTT--CHHHHHHHHHHHTTCEEEEECGG
T ss_pred ceEEEEeCcHHhC-CcCC--ChHHHHHHHHHHCCCEEEEEchh
Confidence 6999999753322 1111 22356999999999999999864
No 261
>2hpv_A FMN-dependent NADH-azoreductase; structural genomics, PS protein structure initiative, southeast collaboratory for S genomics, secsg; HET: FMN; 2.00A {Enterococcus faecalis}
Probab=34.36 E-value=46 Score=28.41 Aligned_cols=41 Identities=7% Similarity=0.119 Sum_probs=29.2
Q ss_pred ceEEEEeecccccc-ccCcHHHHHhHHHHHHHHCC--CeEEEEeec
Q 011163 9 FHIIHICTEMDPLV-SIGSLASYVTGLSGALQRKG--HLVEVILPK 51 (492)
Q Consensus 9 mkIl~v~~~~~p~~-~~GG~~~~~~~l~~~L~~~G--h~V~vi~~~ 51 (492)
|||++|.. .|.. ..|=....+..+.+++.+.| ++|.++-..
T Consensus 2 ~kilii~g--S~r~~~~s~t~~la~~~~~~~~~~g~~~~v~~~dL~ 45 (208)
T 2hpv_A 2 SKLLVVKA--HPLTKEESRSVRALETFLASYRETNPSDEIEILDVY 45 (208)
T ss_dssp CEEEEEEC--CSSCTTTCHHHHHHHHHHHHHHHHCTTSEEEEEETT
T ss_pred CeEEEEEe--cCCCCCCCHHHHHHHHHHHHHHHhCCCCeEEEeeCC
Confidence 69999986 4431 12446666777888888887 999888653
No 262
>4id9_A Short-chain dehydrogenase/reductase; putative dehydrogenase, enzyme function initiative, EFI, STR genomics, oxidoreductase; HET: NAD; 1.60A {Agrobacterium fabrum} PDB: 4idg_A*
Probab=33.91 E-value=33 Score=31.98 Aligned_cols=35 Identities=20% Similarity=0.252 Sum_probs=22.6
Q ss_pred CCceEEEEeeccccccccCcHHHHHhHHHHHHHHCCCeEEEEeec
Q 011163 7 NGFHIIHICTEMDPLVSIGSLASYVTGLSGALQRKGHLVEVILPK 51 (492)
Q Consensus 7 ~~mkIl~v~~~~~p~~~~GG~~~~~~~l~~~L~~~Gh~V~vi~~~ 51 (492)
+.|+||+.. ..|++| ..+++.|.++||+|.++...
T Consensus 18 ~~~~vlVtG-------atG~iG---~~l~~~L~~~G~~V~~~~r~ 52 (347)
T 4id9_A 18 GSHMILVTG-------SAGRVG---RAVVAALRTQGRTVRGFDLR 52 (347)
T ss_dssp ---CEEEET-------TTSHHH---HHHHHHHHHTTCCEEEEESS
T ss_pred CCCEEEEEC-------CCChHH---HHHHHHHHhCCCEEEEEeCC
Confidence 346776532 235555 56778899999999988754
No 263
>2p5y_A UDP-glucose 4-epimerase; TTHA0591, structural genomics, PSI; HET: NAD; 1.92A {Thermus thermophilus HB8} PDB: 2p5u_A*
Probab=33.81 E-value=29 Score=31.75 Aligned_cols=24 Identities=21% Similarity=0.254 Sum_probs=18.2
Q ss_pred cCcHHHHHhHHHHHHHHCCCeEEEEee
Q 011163 24 IGSLASYVTGLSGALQRKGHLVEVILP 50 (492)
Q Consensus 24 ~GG~~~~~~~l~~~L~~~Gh~V~vi~~ 50 (492)
.|++| ..+++.|.++||+|.++..
T Consensus 9 tG~iG---~~l~~~L~~~G~~V~~~~r 32 (311)
T 2p5y_A 9 AGFIG---SHIVEDLLARGLEVAVLDN 32 (311)
T ss_dssp TSHHH---HHHHHHHHTTTCEEEEECC
T ss_pred CcHHH---HHHHHHHHHCCCEEEEEEC
Confidence 36666 5567889999999988754
No 264
>2fzv_A Putative arsenical resistance protein; flavin binding protein, structural genomics, PSI, protein ST initiative; 1.70A {Shigella flexneri 2A} SCOP: c.23.5.4
Probab=33.73 E-value=53 Score=29.91 Aligned_cols=42 Identities=17% Similarity=0.040 Sum_probs=30.4
Q ss_pred CCCceEEEEeeccccccccCc-HHHHHhHHHHHHHHCCCeEEEEeec
Q 011163 6 RNGFHIIHICTEMDPLVSIGS-LASYVTGLSGALQRKGHLVEVILPK 51 (492)
Q Consensus 6 ~~~mkIl~v~~~~~p~~~~GG-~~~~~~~l~~~L~~~Gh~V~vi~~~ 51 (492)
+.+|||++|+. .|. .+| ....+..+++++.+.|++|.++-..
T Consensus 56 ~~~mKILiI~G--S~R--~~S~T~~La~~~~~~l~~~G~eveiidL~ 98 (279)
T 2fzv_A 56 APPVRILLLYG--SLR--ARSFSRLAVEEAARLLQFFGAETRIFDPS 98 (279)
T ss_dssp CSCCEEEEEES--CCS--SSCHHHHHHHHHHHHHHHTTCEEEEBCCT
T ss_pred CCCCEEEEEEe--CCC--CCCHHHHHHHHHHHHHhhCCCEEEEEehh
Confidence 45689999996 342 245 4566666888888899999988653
No 265
>3c97_A Signal transduction histidine kinase; structural genomics, signaling, PSI-2, protein structure initiative; 1.70A {Aspergillus oryzae RIB40}
Probab=33.56 E-value=1.6e+02 Score=22.48 Aligned_cols=109 Identities=10% Similarity=0.056 Sum_probs=60.4
Q ss_pred CcEEEEEecCCChhHHHHHHHHHHHhCCCeEEEEeccCHHHHHHHH--hcCCEEEECCC-CCCCchHHHHHhh-------
Q 011163 336 GIQFVFTGTNKLPSASRALVSFQEELKDGIVIFVDSYDDALLHLIF--SGSDIILCHSF-HDPLLQVPLKALK------- 405 (492)
Q Consensus 336 ~~~lvivG~g~~~~~~~~l~~~~~~~~~~~v~~~~~~~~~~~~~~~--~~adi~v~pS~-~E~~glv~lEAma------- 405 (492)
..+++|+.+. +...+.++...+..+ ..+... -+.++....+ ...|++++=-. -+.-|+.+++.+.
T Consensus 10 ~~~iLivdd~--~~~~~~l~~~L~~~~-~~v~~~--~~~~~al~~l~~~~~dlvllD~~lp~~~g~~~~~~l~~~~~~~~ 84 (140)
T 3c97_A 10 PLSVLIAEDN--DICRLVAAKALEKCT-NDITVV--TNGLQALQAYQNRQFDVIIMDIQMPVMDGLEAVSEIRNYERTHN 84 (140)
T ss_dssp CCEEEEECCC--HHHHHHHHHHHTTTC-SEEEEE--SSHHHHHHHHHHSCCSEEEECTTCCSSCHHHHHHHHHHHHHHHT
T ss_pred CceEEEEcCC--HHHHHHHHHHHHHcC-CceEEE--CCHHHHHHHHhcCCCCEEEEeCCCCCCcHHHHHHHHHhhhhhcC
Confidence 3567777632 344445555444431 334432 2332222332 24688887544 2345676666664
Q ss_pred -cCCceEEEecCCCcccccccccccccceeeeeecCCCHHHHHHHHHHHhc
Q 011163 406 -YGAAPIAVTSSDIEFRHFAEFDHESTRFSRFISSTFGNISLSQALEEIKN 455 (492)
Q Consensus 406 -~G~PvV~~~~~~gg~~e~v~~~~~~~g~~G~~~~~~~~~~l~~ai~~~~~ 455 (492)
..+|+|+... ....+... ..|..||+..|.+.+.|.++|..++.
T Consensus 85 ~~~~~ii~~s~--~~~~~~~~----~~g~~~~l~KP~~~~~L~~~i~~~~~ 129 (140)
T 3c97_A 85 TKRASIIAITA--DTIDDDRP----GAELDEYVSKPLNPNQLRDVVLTCHS 129 (140)
T ss_dssp CCCCCCEEEES--SCCSCCCC----CSSCSEEEESSCCHHHHHHHHHHHHC
T ss_pred CCceEEEEEeC--ccchhHHH----hCChhheEeCCCCHHHHHHHHHHHhC
Confidence 2466766543 22222221 13556899999999999999988764
No 266
>3qxc_A Dethiobiotin synthetase; DTBS, structural genomics, ATP BIND biology, protein structure initiative, midwest center for S genomics, MCSG; HET: ATP; 1.34A {Helicobacter pylori} PDB: 3mle_A* 3qxh_A* 3qxj_A* 3qxs_A* 3qxx_A* 3qy0_A* 2qmo_A
Probab=33.55 E-value=67 Score=28.48 Aligned_cols=41 Identities=12% Similarity=0.041 Sum_probs=30.6
Q ss_pred CCCceEEEEeeccccccccCcHHHHHhHHHHHHHHCCCeEEEEee
Q 011163 6 RNGFHIIHICTEMDPLVSIGSLASYVTGLSGALQRKGHLVEVILP 50 (492)
Q Consensus 6 ~~~mkIl~v~~~~~p~~~~GG~~~~~~~l~~~L~~~Gh~V~vi~~ 50 (492)
++.||.++|+..- .--|-..++..|+++|.++|.+|..+=|
T Consensus 18 ~~m~k~i~ItgT~----t~vGKT~vs~gL~~~L~~~G~~V~~fKP 58 (242)
T 3qxc_A 18 YFQGHMLFISATN----TNAGKTTCARLLAQYCNACGVKTILLKP 58 (242)
T ss_dssp -CCCEEEEEEESS----TTSSHHHHHHHHHHHHHHTTCCEEEECC
T ss_pred hhcCcEEEEEeCC----CCCcHHHHHHHHHHHHHhCCCceEEEee
Confidence 4557888988731 1235666888999999999999988855
No 267
>2ew2_A 2-dehydropantoate 2-reductase, putative; alpha-structure, alpha-beta structure, structural genomics, protein structure initiative; HET: MSE; 2.00A {Enterococcus faecalis}
Probab=33.50 E-value=37 Score=31.05 Aligned_cols=32 Identities=22% Similarity=0.278 Sum_probs=23.5
Q ss_pred CceEEEEeeccccccccCcHHHHHhHHHHHHHHCCCeEEEEee
Q 011163 8 GFHIIHICTEMDPLVSIGSLASYVTGLSGALQRKGHLVEVILP 50 (492)
Q Consensus 8 ~mkIl~v~~~~~p~~~~GG~~~~~~~l~~~L~~~Gh~V~vi~~ 50 (492)
.|||++|.. |.+| ..++..|.+.||+|+++..
T Consensus 3 ~m~i~iiG~--------G~~G---~~~a~~l~~~g~~V~~~~r 34 (316)
T 2ew2_A 3 AMKIAIAGA--------GAMG---SRLGIMLHQGGNDVTLIDQ 34 (316)
T ss_dssp -CEEEEECC--------SHHH---HHHHHHHHHTTCEEEEECS
T ss_pred CCeEEEECc--------CHHH---HHHHHHHHhCCCcEEEEEC
Confidence 489988764 5555 4567888999999998864
No 268
>1i3c_A Response regulator RCP1; phytochrome, signaling protein; 1.90A {Synechocystis SP} SCOP: c.23.1.1 PDB: 1jlk_A
Probab=33.41 E-value=1.7e+02 Score=22.71 Aligned_cols=113 Identities=9% Similarity=-0.024 Sum_probs=62.6
Q ss_pred CcEEEEEecCCChhHHHHHHHHHHHhCCCeEEEEeccCHHHHHHHHh---------cCCEEEECCC-CCCCchHHHHHhh
Q 011163 336 GIQFVFTGTNKLPSASRALVSFQEELKDGIVIFVDSYDDALLHLIFS---------GSDIILCHSF-HDPLLQVPLKALK 405 (492)
Q Consensus 336 ~~~lvivG~g~~~~~~~~l~~~~~~~~~~~v~~~~~~~~~~~~~~~~---------~adi~v~pS~-~E~~glv~lEAma 405 (492)
..+++|+.+ ++...+.++...+..+ ........-+.++....+. ..|++++=-. -+.-|+-+++.+.
T Consensus 8 ~~~ILivdd--~~~~~~~l~~~L~~~~-~~~~v~~~~~~~~al~~l~~~~~~~~~~~~dlillD~~lp~~~g~~l~~~l~ 84 (149)
T 1i3c_A 8 PKVILLVED--SKADSRLVQEVLKTST-IDHELIILRDGLAAMAFLQQQGEYENSPRPNLILLDLNLPKKDGREVLAEIK 84 (149)
T ss_dssp CEEEEEECC--CHHHHHHHHHHHHSCC-SCEEEEEECSHHHHHHHHTTCGGGTTCCCCSEEEECSCCSSSCHHHHHHHHH
T ss_pred CCeEEEEEC--CHHHHHHHHHHHHhcC-CCccEEEeCCHHHHHHHHHhccccccCCCCCEEEEeCCCCCCcHHHHHHHHH
Confidence 356777763 3445556666655432 2112222233333334444 3688887543 2345777777664
Q ss_pred -----cCCceEEEecCCCcccccccccccccceeeeeecCCCHHHHHHHHHHHh
Q 011163 406 -----YGAAPIAVTSSDIEFRHFAEFDHESTRFSRFISSTFGNISLSQALEEIK 454 (492)
Q Consensus 406 -----~G~PvV~~~~~~gg~~e~v~~~~~~~g~~G~~~~~~~~~~l~~ai~~~~ 454 (492)
..+|+|+... ..-.+.+... ...|..||+..|.+.+.|.++|+.++
T Consensus 85 ~~~~~~~~piiils~--~~~~~~~~~~-~~~ga~~~l~KP~~~~~L~~~i~~~~ 135 (149)
T 1i3c_A 85 QNPDLKRIPVVVLTT--SHNEDDVIAS-YELHVNCYLTKSRNLKDLFKMVQGIE 135 (149)
T ss_dssp HCTTTTTSCEEEEES--CCCHHHHHHH-HHTTCSEEEECCSSHHHHHHHHHHHH
T ss_pred hCcCcCCCeEEEEEC--CCChHHHHHH-HHcCCcEEEECCCCHHHHHHHHHHHH
Confidence 2567776543 2222222111 11466789999999999999888874
No 269
>2woj_A ATPase GET3; tail-anchored, membrane protein, targeting factor, endoplasmic reticulum, TRC40, ATP-binding, golgi apparatus; HET: ADP; 1.99A {Saccharomyces cerevisiae} PDB: 3h84_A 3zs8_A 3zs9_A* 3sja_A 3sjb_A 3sjc_A 3sjd_A* 3idq_A 3a36_A 3a37_A*
Probab=33.21 E-value=38 Score=32.06 Aligned_cols=39 Identities=8% Similarity=0.061 Sum_probs=29.3
Q ss_pred CCceEEEEeeccccccccCcHHH--HHhHHHHHHH--HCCCeEEEEeecC
Q 011163 7 NGFHIIHICTEMDPLVSIGSLAS--YVTGLSGALQ--RKGHLVEVILPKY 52 (492)
Q Consensus 7 ~~mkIl~v~~~~~p~~~~GG~~~--~~~~l~~~L~--~~Gh~V~vi~~~~ 52 (492)
+.++|++++. .||+|+ ...+|+.+|+ ++|++|.++..+.
T Consensus 16 ~~~~i~v~sg-------KGGvGKTTvaanLA~~lA~~~~G~rVLLvD~D~ 58 (354)
T 2woj_A 16 TTHKWIFVGG-------KGGVGKTTSSCSIAIQMALSQPNKQFLLISTDP 58 (354)
T ss_dssp SSCCEEEEEE-------STTSSHHHHHHHHHHHHHHHCTTSCEEEEECCS
T ss_pred CCcEEEEEeC-------CCCCcHHHHHHHHHHHHHHhcCCCeEEEEECCC
Confidence 3467777664 377765 5677899999 9999999998654
No 270
>5nul_A Flavodoxin; electron transport, flavoprotein, FMN; HET: FMN; 1.60A {Clostridium beijerinckii} SCOP: c.23.5.1 PDB: 2flv_A* 2fvx_A* 1fld_A* 3nll_A* 1fvx_A* 1fla_A* 4nll_A* 5nll_A* 2fox_A* 5ull_A* 2fdx_A* 2fax_A* 6nul_A* 1fln_A* 4nul_A*
Probab=33.18 E-value=40 Score=26.52 Aligned_cols=29 Identities=14% Similarity=0.152 Sum_probs=25.7
Q ss_pred ccCcHHHHHhHHHHHHHHCCCeEEEEeec
Q 011163 23 SIGSLASYVTGLSGALQRKGHLVEVILPK 51 (492)
Q Consensus 23 ~~GG~~~~~~~l~~~L~~~Gh~V~vi~~~ 51 (492)
.+|.++.+...++++|.+.|++|.++-..
T Consensus 8 ~tGnT~~iA~~ia~~l~~~g~~v~~~~~~ 36 (138)
T 5nul_A 8 GTGNTEKMAELIAKGIIESGKDVNTINVS 36 (138)
T ss_dssp SSSHHHHHHHHHHHHHHHTTCCCEEEEGG
T ss_pred CCchHHHHHHHHHHHHHHCCCeEEEEEhh
Confidence 46999999999999999999999988654
No 271
>1mb3_A Cell division response regulator DIVK; signal transduction protein, structural proteomics in europe, spine, structural genomics; 1.41A {Caulobacter vibrioides} SCOP: c.23.1.1 PDB: 1m5u_A 1mav_A 1mb0_A 1m5t_A
Probab=33.14 E-value=1.5e+02 Score=21.91 Aligned_cols=110 Identities=13% Similarity=0.043 Sum_probs=58.5
Q ss_pred EEEEEecCCChhHHHHHHHHHHHhCCCeEEEEeccCHHHHHHHH--hcCCEEEECCC-CCCCchHHHHHhhc-----CCc
Q 011163 338 QFVFTGTNKLPSASRALVSFQEELKDGIVIFVDSYDDALLHLIF--SGSDIILCHSF-HDPLLQVPLKALKY-----GAA 409 (492)
Q Consensus 338 ~lvivG~g~~~~~~~~l~~~~~~~~~~~v~~~~~~~~~~~~~~~--~~adi~v~pS~-~E~~glv~lEAma~-----G~P 409 (492)
+++|+.+ ++...+.++...+..+ -.+.. ..+..+....+ ...|++++=.. -+.-|+.+++.+.. .+|
T Consensus 3 ~ilivdd--~~~~~~~l~~~L~~~~-~~v~~--~~~~~~a~~~~~~~~~dlvi~D~~l~~~~g~~~~~~l~~~~~~~~~~ 77 (124)
T 1mb3_A 3 KVLIVED--NELNMKLFHDLLEAQG-YETLQ--TREGLSALSIARENKPDLILMDIQLPEISGLEVTKWLKEDDDLAHIP 77 (124)
T ss_dssp EEEEECS--CHHHHHHHHHHHHHTT-CEEEE--ESCHHHHHHHHHHHCCSEEEEESBCSSSBHHHHHHHHHHSTTTTTSC
T ss_pred EEEEEcC--CHHHHHHHHHHHHHcC-cEEEE--eCCHHHHHHHHhcCCCCEEEEeCCCCCCCHHHHHHHHHcCccccCCc
Confidence 4566653 3445556666555542 33332 23333322222 24688776543 24456767766642 567
Q ss_pred eEEEecCCCcccccccccccccceeeeeecCCCHHHHHHHHHHHhc
Q 011163 410 PIAVTSSDIEFRHFAEFDHESTRFSRFISSTFGNISLSQALEEIKN 455 (492)
Q Consensus 410 vV~~~~~~gg~~e~v~~~~~~~g~~G~~~~~~~~~~l~~ai~~~~~ 455 (492)
+|+... ..-.+..... ...|..+|+..|.+.+.|.+++..++.
T Consensus 78 ii~~s~--~~~~~~~~~~-~~~g~~~~l~KP~~~~~l~~~i~~~~~ 120 (124)
T 1mb3_A 78 VVAVTA--FAMKGDEERI-REGGCEAYISKPISVVHFLETIKRLLE 120 (124)
T ss_dssp EEEEC--------CHHHH-HHHTCSEEECSSCCHHHHHHHHHHHHS
T ss_pred EEEEEC--CCCHHHHHHH-HhCCCCEEEeCCCCHHHHHHHHHHHHh
Confidence 776543 2222221110 113566899999999999999988764
No 272
>3l6e_A Oxidoreductase, short-chain dehydrogenase/reducta; structural genomics, PSI-2, protein structure initiative; 2.30A {Aeromonas hydrophila subsp} SCOP: c.2.1.0
Probab=33.09 E-value=44 Score=29.23 Aligned_cols=34 Identities=21% Similarity=0.267 Sum_probs=25.5
Q ss_pred ceEEEEeeccccccccCcHHHHHhHHHHHHHHCCCeEEEEeec
Q 011163 9 FHIIHICTEMDPLVSIGSLASYVTGLSGALQRKGHLVEVILPK 51 (492)
Q Consensus 9 mkIl~v~~~~~p~~~~GG~~~~~~~l~~~L~~~Gh~V~vi~~~ 51 (492)
||+++||- ..||+| ..+++.|.++|++|.++...
T Consensus 3 ~k~vlVTG------as~GIG---~a~a~~l~~~G~~V~~~~r~ 36 (235)
T 3l6e_A 3 LGHIIVTG------AGSGLG---RALTIGLVERGHQVSMMGRR 36 (235)
T ss_dssp CCEEEEES------TTSHHH---HHHHHHHHHTTCEEEEEESC
T ss_pred CCEEEEEC------CCCHHH---HHHHHHHHHCCCEEEEEECC
Confidence 56777774 357777 47788999999998877643
No 273
>2a35_A Hypothetical protein PA4017; alpha-beta-alpha sandwich, structura genomics, PSI, protein structure initiative; 1.50A {Pseudomonas aeruginosa} SCOP: c.2.1.2
Probab=32.89 E-value=33 Score=29.21 Aligned_cols=35 Identities=11% Similarity=-0.007 Sum_probs=23.8
Q ss_pred CCceEEEEeeccccccccCcHHHHHhHHHHHHHHCCC--eEEEEeec
Q 011163 7 NGFHIIHICTEMDPLVSIGSLASYVTGLSGALQRKGH--LVEVILPK 51 (492)
Q Consensus 7 ~~mkIl~v~~~~~p~~~~GG~~~~~~~l~~~L~~~Gh--~V~vi~~~ 51 (492)
+.|+|+++. ..|++| ..+++.|.++|+ +|.++...
T Consensus 4 ~~~~vlVtG-------atG~iG---~~l~~~l~~~g~~~~V~~~~r~ 40 (215)
T 2a35_A 4 TPKRVLLAG-------ATGLTG---EHLLDRILSEPTLAKVIAPARK 40 (215)
T ss_dssp CCCEEEEEC-------TTSHHH---HHHHHHHHHCTTCCEEECCBSS
T ss_pred CCceEEEEC-------CCcHHH---HHHHHHHHhCCCCCeEEEEeCC
Confidence 357776533 236665 567788999998 88877654
No 274
>1rkx_A CDP-glucose-4,6-dehydratase; SDR, lyase; HET: NAD; 1.80A {Yersinia pseudotuberculosis} SCOP: c.2.1.2 PDB: 1wvg_A*
Probab=32.88 E-value=42 Score=31.36 Aligned_cols=34 Identities=24% Similarity=0.040 Sum_probs=23.7
Q ss_pred CceEEEEeeccccccccCcHHHHHhHHHHHHHHCCCeEEEEeec
Q 011163 8 GFHIIHICTEMDPLVSIGSLASYVTGLSGALQRKGHLVEVILPK 51 (492)
Q Consensus 8 ~mkIl~v~~~~~p~~~~GG~~~~~~~l~~~L~~~Gh~V~vi~~~ 51 (492)
.|+|++.. ..|++| ..+++.|.++||+|.++...
T Consensus 9 ~~~vlVtG-------atG~iG---~~l~~~L~~~g~~V~~~~r~ 42 (357)
T 1rkx_A 9 GKRVFVTG-------HTGFKG---GWLSLWLQTMGATVKGYSLT 42 (357)
T ss_dssp TCEEEEET-------TTSHHH---HHHHHHHHHTTCEEEEEESS
T ss_pred CCEEEEEC-------CCchHH---HHHHHHHHhCCCeEEEEeCC
Confidence 46775532 235565 55678899999999988764
No 275
>1jay_A Coenzyme F420H2:NADP+ oxidoreductase (FNO); rossman fold, structural genomics; HET: NAP F42; 1.65A {Archaeoglobus fulgidus} SCOP: c.2.1.6 PDB: 1jax_A*
Probab=32.77 E-value=37 Score=29.08 Aligned_cols=32 Identities=19% Similarity=0.167 Sum_probs=22.5
Q ss_pred ceEEEEeeccccccccCcHHHHHhHHHHHHHHCCCeEEEEee
Q 011163 9 FHIIHICTEMDPLVSIGSLASYVTGLSGALQRKGHLVEVILP 50 (492)
Q Consensus 9 mkIl~v~~~~~p~~~~GG~~~~~~~l~~~L~~~Gh~V~vi~~ 50 (492)
|||+++. |.|..-..++..|.+.||+|.++..
T Consensus 1 m~i~iiG----------a~G~~G~~ia~~l~~~g~~V~~~~r 32 (212)
T 1jay_A 1 MRVALLG----------GTGNLGKGLALRLATLGHEIVVGSR 32 (212)
T ss_dssp CEEEEET----------TTSHHHHHHHHHHHTTTCEEEEEES
T ss_pred CeEEEEc----------CCCHHHHHHHHHHHHCCCEEEEEeC
Confidence 6776643 3444445678889999999988764
No 276
>2hqr_A Putative transcriptional regulator; phosporylation-independent response regulator, H. pylori, SY dimer, signaling protein; NMR {Helicobacter pylori}
Probab=32.76 E-value=1.4e+02 Score=25.20 Aligned_cols=108 Identities=5% Similarity=-0.066 Sum_probs=59.9
Q ss_pred EEEEEecCCChhHHHHHHHHHHHhCCCeEEEEeccCHHHHHHHHh--cCCEEEECCCCCCCchHHHHHhh--c-CCceEE
Q 011163 338 QFVFTGTNKLPSASRALVSFQEELKDGIVIFVDSYDDALLHLIFS--GSDIILCHSFHDPLLQVPLKALK--Y-GAAPIA 412 (492)
Q Consensus 338 ~lvivG~g~~~~~~~~l~~~~~~~~~~~v~~~~~~~~~~~~~~~~--~adi~v~pS~~E~~glv~lEAma--~-G~PvV~ 412 (492)
+++|+.+ ++...+.++...+..+ -.|.. ..+.++....+. ..|++++|. .-|+-+++.+. . .+|+|+
T Consensus 2 ~ilivdd--~~~~~~~l~~~L~~~g-~~v~~--~~~~~~al~~l~~~~~dlvilp~---~~g~~~~~~lr~~~~~~~ii~ 73 (223)
T 2hqr_A 2 RVLLIEK--NSVLGGEIEKGLNVKG-FMADV--TESLEDGEYLMDIRNYDLVMVSD---KNALSFVSRIKEKHSSIVVLV 73 (223)
T ss_dssp CEEEECS--CHHHHHHHHHHHGGGT-CCEEE--ESSHHHHHHHHTTSCCSEEEECC---TTHHHHHHHHHHHCTTSEEEE
T ss_pred EEEEEcC--CHHHHHHHHHHHHHCC-cEEEE--ECCHHHHHHHHhcCCCCEEEeCC---CCHHHHHHHHHhCCCCCcEEE
Confidence 3455553 3444555555555432 34432 233333333433 368888543 34666666554 2 678887
Q ss_pred EecCCCcccccccccccccceeeeeecCC-CHHHHHHHHHHHhcC
Q 011163 413 VTSSDIEFRHFAEFDHESTRFSRFISSTF-GNISLSQALEEIKNN 456 (492)
Q Consensus 413 ~~~~~gg~~e~v~~~~~~~g~~G~~~~~~-~~~~l~~ai~~~~~~ 456 (492)
... ..-.+.+... ...|..||+..|. +.+.|..+|..++..
T Consensus 74 lt~--~~~~~~~~~~-~~~Ga~~~l~Kp~~~~~~L~~~i~~~~~~ 115 (223)
T 2hqr_A 74 SSD--NPTSEEEVHA-FEQGADDYIAKPYRSIKALVARIEARLRF 115 (223)
T ss_dssp EES--SCCHHHHHHH-HHHTCSEEEETTCSCTHHHHHHHHHHTSS
T ss_pred EEC--CCCHHHHHHH-HHcCCCEEEECCCCCHHHHHHHHHHHhcc
Confidence 654 2222222111 1135678999999 999999999988753
No 277
>1mxh_A Pteridine reductase 2; SDR topology, protein-substrate complex, oxidoreductase; HET: NAP DHF; 2.20A {Trypanosoma cruzi} SCOP: c.2.1.2 PDB: 1mxf_A*
Probab=32.66 E-value=33 Score=30.80 Aligned_cols=32 Identities=16% Similarity=0.147 Sum_probs=23.5
Q ss_pred eEEEEeeccccccccCcHHHHHhHHHHHHHHCCCeEEEEee
Q 011163 10 HIIHICTEMDPLVSIGSLASYVTGLSGALQRKGHLVEVILP 50 (492)
Q Consensus 10 kIl~v~~~~~p~~~~GG~~~~~~~l~~~L~~~Gh~V~vi~~ 50 (492)
|.++||- ..||+|. .+++.|.++|++|.++..
T Consensus 12 k~~lVTG------as~gIG~---~ia~~l~~~G~~V~~~~r 43 (276)
T 1mxh_A 12 PAAVITG------GARRIGH---SIAVRLHQQGFRVVVHYR 43 (276)
T ss_dssp CEEEETT------CSSHHHH---HHHHHHHHTTCEEEEEES
T ss_pred CEEEEeC------CCcHHHH---HHHHHHHHCCCEEEEEeC
Confidence 5666663 3467774 678889999999988765
No 278
>1xg5_A ARPG836; short chain dehydrogenase, human, SGC, structural genomics, structural genomics consortium, oxidoreductase; HET: NAP; 1.53A {Homo sapiens} SCOP: c.2.1.2
Probab=32.60 E-value=50 Score=29.70 Aligned_cols=32 Identities=16% Similarity=0.213 Sum_probs=23.4
Q ss_pred eEEEEeeccccccccCcHHHHHhHHHHHHHHCCCeEEEEee
Q 011163 10 HIIHICTEMDPLVSIGSLASYVTGLSGALQRKGHLVEVILP 50 (492)
Q Consensus 10 kIl~v~~~~~p~~~~GG~~~~~~~l~~~L~~~Gh~V~vi~~ 50 (492)
|.++|+- ..||+| ..+++.|.++|++|.++..
T Consensus 33 k~vlVTG------asggIG---~~la~~l~~~G~~V~~~~r 64 (279)
T 1xg5_A 33 RLALVTG------ASGGIG---AAVARALVQQGLKVVGCAR 64 (279)
T ss_dssp CEEEEES------TTSHHH---HHHHHHHHHTTCEEEEEES
T ss_pred CEEEEEC------CCchHH---HHHHHHHHHCCCEEEEEEC
Confidence 5666663 346776 4678889999999988764
No 279
>3awd_A GOX2181, putative polyol dehydrogenase; oxidoreductase; 1.80A {Gluconobacter oxydans}
Probab=32.53 E-value=51 Score=29.05 Aligned_cols=33 Identities=12% Similarity=0.079 Sum_probs=23.4
Q ss_pred eEEEEeeccccccccCcHHHHHhHHHHHHHHCCCeEEEEeec
Q 011163 10 HIIHICTEMDPLVSIGSLASYVTGLSGALQRKGHLVEVILPK 51 (492)
Q Consensus 10 kIl~v~~~~~p~~~~GG~~~~~~~l~~~L~~~Gh~V~vi~~~ 51 (492)
|.++|+- ..||+| ..+++.|.++|++|.++...
T Consensus 14 k~vlItG------asggiG---~~la~~l~~~G~~V~~~~r~ 46 (260)
T 3awd_A 14 RVAIVTG------GAQNIG---LACVTALAEAGARVIIADLD 46 (260)
T ss_dssp CEEEEET------TTSHHH---HHHHHHHHHTTCEEEEEESC
T ss_pred CEEEEeC------CCchHH---HHHHHHHHHCCCEEEEEeCC
Confidence 4555553 346666 56788899999999887643
No 280
>2r6j_A Eugenol synthase 1; phenylpropene, PIP reductase, short-chain dehydrogenase/reductase, plant protein; HET: NDP; 1.50A {Ocimum basilicum} PDB: 2qys_A 2qx7_A* 2qzz_A* 2r2g_A* 3c3x_A* 2qw8_A*
Probab=32.40 E-value=27 Score=32.13 Aligned_cols=26 Identities=15% Similarity=0.166 Sum_probs=19.9
Q ss_pred cCcHHHHHhHHHHHHHHCCCeEEEEeecC
Q 011163 24 IGSLASYVTGLSGALQRKGHLVEVILPKY 52 (492)
Q Consensus 24 ~GG~~~~~~~l~~~L~~~Gh~V~vi~~~~ 52 (492)
+|++|. .++++|.++||+|.+++...
T Consensus 20 tG~iG~---~l~~~L~~~g~~V~~l~R~~ 45 (318)
T 2r6j_A 20 TGYIGN---HMVKGSLKLGHPTYVFTRPN 45 (318)
T ss_dssp TSTTHH---HHHHHHHHTTCCEEEEECTT
T ss_pred CchHHH---HHHHHHHHCCCcEEEEECCC
Confidence 466664 56788999999999888653
No 281
>1udb_A Epimerase, UDP-galactose-4-epimerase; isomerase; HET: NAD UFG; 1.65A {Escherichia coli} SCOP: c.2.1.2 PDB: 1lrj_A* 1nai_A* 1uda_A* 1nah_A* 1xel_A* 1kvq_A* 1kvs_A* 1udc_A* 2udp_A* 1a9z_A* 1kvt_A* 1kvr_A* 1lrk_A* 1lrl_A* 1kvu_A* 1a9y_A*
Probab=32.33 E-value=35 Score=31.62 Aligned_cols=24 Identities=25% Similarity=0.242 Sum_probs=18.5
Q ss_pred cCcHHHHHhHHHHHHHHCCCeEEEEee
Q 011163 24 IGSLASYVTGLSGALQRKGHLVEVILP 50 (492)
Q Consensus 24 ~GG~~~~~~~l~~~L~~~Gh~V~vi~~ 50 (492)
.|++|. .+++.|.++||+|.++..
T Consensus 9 tG~iG~---~l~~~L~~~G~~V~~~~~ 32 (338)
T 1udb_A 9 SGYIGS---HTCVQLLQNGHDVIILDN 32 (338)
T ss_dssp TSHHHH---HHHHHHHHTTCEEEEEEC
T ss_pred CCHHHH---HHHHHHHHCCCEEEEEec
Confidence 466664 677889999999988753
No 282
>2wsb_A Galactitol dehydrogenase; oxidoreductase, SDR, rossmann fold, tagatose; HET: NAD; 1.25A {Rhodobacter sphaeroides} PDB: 2wdz_A* 3lqf_A*
Probab=32.33 E-value=58 Score=28.55 Aligned_cols=33 Identities=9% Similarity=0.073 Sum_probs=23.8
Q ss_pred eEEEEeeccccccccCcHHHHHhHHHHHHHHCCCeEEEEeec
Q 011163 10 HIIHICTEMDPLVSIGSLASYVTGLSGALQRKGHLVEVILPK 51 (492)
Q Consensus 10 kIl~v~~~~~p~~~~GG~~~~~~~l~~~L~~~Gh~V~vi~~~ 51 (492)
|.++|+- ..||+| ..+++.|.++|++|.++...
T Consensus 12 k~vlITG------asggiG---~~la~~l~~~G~~V~~~~r~ 44 (254)
T 2wsb_A 12 ACAAVTG------AGSGIG---LEICRAFAASGARLILIDRE 44 (254)
T ss_dssp CEEEEET------TTSHHH---HHHHHHHHHTTCEEEEEESC
T ss_pred CEEEEEC------CCcHHH---HHHHHHHHHCCCEEEEEeCC
Confidence 5556663 346776 46788999999999887643
No 283
>1zq6_A Otcase, ornithine carbamoyltransferase; alpha/beta two-domain; HET: AOR; 1.80A {Xanthomonas campestris} PDB: 1yh0_A* 1zq2_A 1yh1_A* 1zq8_A* 3kzc_A* 3kzk_A* 3kzm_A* 3kzn_A* 3kzo_A* 3m4j_A* 3m5d_A* 3m5c_A* 2g6a_A* 3l05_A* 2g65_A* 3l02_A* 3m4n_A* 2g6c_A* 3l06_A* 2g68_A* ...
Probab=32.30 E-value=3.1e+02 Score=25.83 Aligned_cols=93 Identities=12% Similarity=0.145 Sum_probs=56.8
Q ss_pred HHHHHHHHhCCC-CCCCceEEEEEeccccc--cCHHHHHHHHHHHhHcCcEEEEEecC-C---ChhHHHHHHHHHHHhCC
Q 011163 291 CKVTLQQQLGLS-KDASTIVVGCIFSDVSD--VFLENLKAVVRGAKMRGIQFVFTGTN-K---LPSASRALVSFQEELKD 363 (492)
Q Consensus 291 ~~~~~~~~lg~~-~~~~~~~i~~~grl~~~--Kg~~~li~a~~~l~~~~~~lvivG~g-~---~~~~~~~l~~~~~~~~~ 363 (492)
+--.+++.+|-. -+....++.++|-+... .=...++.++..+ ++++.+++.. + +++..+.+++.+++.+
T Consensus 175 Dl~TI~E~~g~~~l~glkvvva~vGDl~~~~nrva~Sl~~~~~~~---G~~v~~~~P~~~~~~~~~~~~~~~~~a~~~g- 250 (359)
T 1zq6_A 175 HALALQEHFGTPDLRGKKYVLTWTYHPKPLNTAVANSALTIATRM---GMDVTLLCPTPDYILDERYMDWAAQNVAESG- 250 (359)
T ss_dssp HHHHHHHHHTSSCCTTCEEEEEECCCSSCCCSHHHHHHHHHHHHT---TCEEEEECSSGGGCCCHHHHHHHHHHHHHHS-
T ss_pred HHHHHHHHhCCCcccCCeeEEEEEecccccccchHHHHHHHHHHc---CCEEEEEcCccccCCCHHHHHHHHHHHHHcC-
Confidence 445678888841 12222338899987543 3355677777665 6899999854 2 2234455666666663
Q ss_pred CeEEEEeccCHHHHHHHHhcCCEEEECCC
Q 011163 364 GIVIFVDSYDDALLHLIFSGSDIILCHSF 392 (492)
Q Consensus 364 ~~v~~~~~~~~~~~~~~~~~adi~v~pS~ 392 (492)
..+... .+.+ +.+..||++....+
T Consensus 251 ~~v~~~--~d~~---eav~~aDvVyt~~w 274 (359)
T 1zq6_A 251 GSLQVS--HDID---SAYAGADVVYAKSW 274 (359)
T ss_dssp CEEEEE--CCHH---HHHTTCSEEEEECC
T ss_pred CeEEEE--CCHH---HHhcCCCEEEECCc
Confidence 455543 2332 45799999887764
No 284
>1zmt_A Haloalcohol dehalogenase HHEC; halohydrin dehalogenase, epoxide catalysis, enantioselectivity, lyase; HET: RNO; 1.70A {Agrobacterium tumefaciens} SCOP: c.2.1.2 PDB: 1pwz_A 1px0_A* 1pwx_A* 1zo8_A*
Probab=32.27 E-value=21 Score=31.85 Aligned_cols=33 Identities=15% Similarity=0.014 Sum_probs=24.4
Q ss_pred ceEEEEeeccccccccCcHHHHHhHHHHHHHHCCCeEEEEee
Q 011163 9 FHIIHICTEMDPLVSIGSLASYVTGLSGALQRKGHLVEVILP 50 (492)
Q Consensus 9 mkIl~v~~~~~p~~~~GG~~~~~~~l~~~L~~~Gh~V~vi~~ 50 (492)
||+++||- ..||+|. .+++.|.++|++|.++..
T Consensus 1 Mk~vlVTG------as~gIG~---~ia~~l~~~G~~V~~~~r 33 (254)
T 1zmt_A 1 MSTAIVTN------VKHFGGM---GSALRLSEAGHTVACHDE 33 (254)
T ss_dssp -CEEEESS------TTSTTHH---HHHHHHHHTTCEEEECCG
T ss_pred CeEEEEeC------CCchHHH---HHHHHHHHCCCEEEEEeC
Confidence 67777774 3578875 578889999999887654
No 285
>2q1w_A Putative nucleotide sugar epimerase/ dehydratase; rossman fold, protein-NAD complex, sugar binding protein; HET: NAD; 2.19A {Bordetella bronchiseptica}
Probab=32.09 E-value=44 Score=30.98 Aligned_cols=25 Identities=20% Similarity=0.207 Sum_probs=19.1
Q ss_pred cCcHHHHHhHHHHHHHHCCCeEEEEeec
Q 011163 24 IGSLASYVTGLSGALQRKGHLVEVILPK 51 (492)
Q Consensus 24 ~GG~~~~~~~l~~~L~~~Gh~V~vi~~~ 51 (492)
.|++| ..+++.|.++|++|.++...
T Consensus 30 tG~iG---~~l~~~L~~~g~~V~~~~r~ 54 (333)
T 2q1w_A 30 CGQIG---SHIAELLLERGDKVVGIDNF 54 (333)
T ss_dssp TSHHH---HHHHHHHHHTTCEEEEEECC
T ss_pred ccHHH---HHHHHHHHHCCCEEEEEECC
Confidence 35665 56678899999999988754
No 286
>3kcn_A Adenylate cyclase homolog; SGX, PSI 2, structural genomics, protein structure initiative; 2.45A {Rhodopirellula baltica}
Probab=32.07 E-value=1.8e+02 Score=22.59 Aligned_cols=114 Identities=9% Similarity=-0.084 Sum_probs=61.5
Q ss_pred CcEEEEEecCCChhHHHHHHHHHHHhCCCeEEEEeccCHHHHHHHHh-c--CCEEEECCC-CCCCchHHHHHhh---cCC
Q 011163 336 GIQFVFTGTNKLPSASRALVSFQEELKDGIVIFVDSYDDALLHLIFS-G--SDIILCHSF-HDPLLQVPLKALK---YGA 408 (492)
Q Consensus 336 ~~~lvivG~g~~~~~~~~l~~~~~~~~~~~v~~~~~~~~~~~~~~~~-~--adi~v~pS~-~E~~glv~lEAma---~G~ 408 (492)
..+++|+.+. +...+.++...+. .-.|.. ..+.++....+. . .|++++-.. -+.-|+-+++.+. ..+
T Consensus 4 ~~~ILivdd~--~~~~~~l~~~L~~--~~~v~~--~~~~~~a~~~l~~~~~~dlvi~D~~l~~~~g~~~~~~l~~~~~~~ 77 (151)
T 3kcn_A 4 NERILLVDDD--YSLLNTLKRNLSF--DFEVTT--CESGPEALACIKKSDPFSVIMVDMRMPGMEGTEVIQKARLISPNS 77 (151)
T ss_dssp CCEEEEECSC--HHHHHHHHHHHTT--TSEEEE--ESSHHHHHHHHHHSCCCSEEEEESCCSSSCHHHHHHHHHHHCSSC
T ss_pred CCeEEEEeCC--HHHHHHHHHHhcc--CceEEE--eCCHHHHHHHHHcCCCCCEEEEeCCCCCCcHHHHHHHHHhcCCCc
Confidence 3577777732 3444444444432 134432 223333333332 2 388877543 3455666666543 467
Q ss_pred ceEEEecCCCcccccccccccccc-eeeeeecCCCHHHHHHHHHHHhcCHH
Q 011163 409 APIAVTSSDIEFRHFAEFDHESTR-FSRFISSTFGNISLSQALEEIKNNPL 458 (492)
Q Consensus 409 PvV~~~~~~gg~~e~v~~~~~~~g-~~G~~~~~~~~~~l~~ai~~~~~~~~ 458 (492)
|+|+... ..-.+.+... ...| ..+|+..|.+.+.|.++|..+++...
T Consensus 78 ~ii~~s~--~~~~~~~~~~-~~~g~~~~~l~KP~~~~~L~~~i~~~l~~~~ 125 (151)
T 3kcn_A 78 VYLMLTG--NQDLTTAMEA-VNEGQVFRFLNKPCQMSDIKAAINAGIKQYD 125 (151)
T ss_dssp EEEEEEC--GGGHHHHHHH-HHHTCCSEEEESSCCHHHHHHHHHHHHHHHH
T ss_pred EEEEEEC--CCCHHHHHHH-HHcCCeeEEEcCCCCHHHHHHHHHHHHHHHH
Confidence 7776543 2222221110 1134 56899999999999999999876443
No 287
>2zat_A Dehydrogenase/reductase SDR family member 4; alpha/beta, oxidoreductase; HET: NAP; 1.50A {Sus scrofa} PDB: 3o4r_A*
Probab=31.97 E-value=44 Score=29.66 Aligned_cols=32 Identities=16% Similarity=0.211 Sum_probs=23.7
Q ss_pred eEEEEeeccccccccCcHHHHHhHHHHHHHHCCCeEEEEee
Q 011163 10 HIIHICTEMDPLVSIGSLASYVTGLSGALQRKGHLVEVILP 50 (492)
Q Consensus 10 kIl~v~~~~~p~~~~GG~~~~~~~l~~~L~~~Gh~V~vi~~ 50 (492)
|.++||- ..||+|. .++++|.++|++|.++..
T Consensus 15 k~vlVTG------as~gIG~---~ia~~l~~~G~~V~~~~r 46 (260)
T 2zat_A 15 KVALVTA------STDGIGL---AIARRLAQDGAHVVVSSR 46 (260)
T ss_dssp CEEEESS------CSSHHHH---HHHHHHHHTTCEEEEEES
T ss_pred CEEEEEC------CCcHHHH---HHHHHHHHCCCEEEEEeC
Confidence 5666664 3577775 578889999999988764
No 288
>3orf_A Dihydropteridine reductase; alpha-beta-alpha sandwich, rossmann fold, oxidoreductase (AC NADH), NADH binding, oxidoreductase; HET: NAD; 2.16A {Dictyostelium discoideum}
Probab=31.95 E-value=54 Score=28.98 Aligned_cols=34 Identities=15% Similarity=0.042 Sum_probs=25.1
Q ss_pred eEEEEeeccccccccCcHHHHHhHHHHHHHHCCCeEEEEeecC
Q 011163 10 HIIHICTEMDPLVSIGSLASYVTGLSGALQRKGHLVEVILPKY 52 (492)
Q Consensus 10 kIl~v~~~~~p~~~~GG~~~~~~~l~~~L~~~Gh~V~vi~~~~ 52 (492)
|.++|+- ..||+| ..++++|.++|++|.++....
T Consensus 23 k~vlITG------as~gIG---~~la~~l~~~G~~V~~~~r~~ 56 (251)
T 3orf_A 23 KNILVLG------GSGALG---AEVVKFFKSKSWNTISIDFRE 56 (251)
T ss_dssp CEEEEET------TTSHHH---HHHHHHHHHTTCEEEEEESSC
T ss_pred CEEEEEC------CCCHHH---HHHHHHHHHCCCEEEEEeCCc
Confidence 6666664 346666 578889999999988887543
No 289
>2z1m_A GDP-D-mannose dehydratase; short-chain dehydrogenase/reductase, lyase, structural genom NPPSFA; HET: NDP GDP; 2.00A {Aquifex aeolicus} PDB: 2z95_A*
Probab=31.80 E-value=38 Score=31.33 Aligned_cols=34 Identities=21% Similarity=0.018 Sum_probs=23.6
Q ss_pred CceEEEEeeccccccccCcHHHHHhHHHHHHHHCCCeEEEEeec
Q 011163 8 GFHIIHICTEMDPLVSIGSLASYVTGLSGALQRKGHLVEVILPK 51 (492)
Q Consensus 8 ~mkIl~v~~~~~p~~~~GG~~~~~~~l~~~L~~~Gh~V~vi~~~ 51 (492)
.|+|++.. ..|++| ..+++.|.++||+|.++...
T Consensus 3 ~~~vlVtG-------atG~iG---~~l~~~L~~~G~~V~~~~r~ 36 (345)
T 2z1m_A 3 GKRALITG-------IRGQDG---AYLAKLLLEKGYEVYGADRR 36 (345)
T ss_dssp CCEEEEET-------TTSHHH---HHHHHHHHHTTCEEEEECSC
T ss_pred CCEEEEEC-------CCChHH---HHHHHHHHHCCCEEEEEECC
Confidence 36775532 246666 55778899999999888754
No 290
>1byi_A Dethiobiotin synthase; biotin synthesis, cyclo-ligase, ligase; 0.97A {Escherichia coli} SCOP: c.37.1.10 PDB: 1bs1_A* 1a82_A 1dad_A* 1dae_A* 1daf_A* 1dag_A* 1dah_A* 1dai_A* 1dak_A* 1dam_A* 1dbs_A 1dts_A
Probab=31.70 E-value=46 Score=28.65 Aligned_cols=25 Identities=12% Similarity=-0.052 Sum_probs=20.3
Q ss_pred CcHH--HHHhHHHHHHHHCCCeEEEEe
Q 011163 25 GSLA--SYVTGLSGALQRKGHLVEVIL 49 (492)
Q Consensus 25 GG~~--~~~~~l~~~L~~~Gh~V~vi~ 49 (492)
||+| +.+.+|+.+|+++|++|.++=
T Consensus 11 gGvGKTt~a~nLa~~la~~G~rVll~d 37 (224)
T 1byi_A 11 TEVGKTVASCALLQAAKAAGYRTAGYK 37 (224)
T ss_dssp TTSCHHHHHHHHHHHHHHTTCCEEEEC
T ss_pred CCCCHHHHHHHHHHHHHHCCCCEEEEc
Confidence 5555 567789999999999998863
No 291
>3crn_A Response regulator receiver domain protein, CHEY-; structural genomics, signal regulator receiver domain; HET: PHD; 1.58A {Methanospirillum hungatei jf-1}
Probab=31.67 E-value=1.7e+02 Score=22.11 Aligned_cols=111 Identities=12% Similarity=-0.056 Sum_probs=61.2
Q ss_pred cEEEEEecCCChhHHHHHHHHHHHhCCCeEEEEeccCHHHHHHHH--hcCCEEEECCC-CCCCchHHHHHhh---cCCce
Q 011163 337 IQFVFTGTNKLPSASRALVSFQEELKDGIVIFVDSYDDALLHLIF--SGSDIILCHSF-HDPLLQVPLKALK---YGAAP 410 (492)
Q Consensus 337 ~~lvivG~g~~~~~~~~l~~~~~~~~~~~v~~~~~~~~~~~~~~~--~~adi~v~pS~-~E~~glv~lEAma---~G~Pv 410 (492)
.+++|+.+ ++...+.++...+..+ -.+.. ..+.++....+ ...|++++=-. -..-|+.+++.+. .++|+
T Consensus 4 ~~Ilivdd--~~~~~~~l~~~L~~~g-~~v~~--~~~~~~al~~~~~~~~dlvl~D~~l~~~~g~~~~~~l~~~~~~~~i 78 (132)
T 3crn_A 4 KRILIVDD--DTAILDSTKQILEFEG-YEVEI--AATAGEGLAKIENEFFNLALFXIKLPDMEGTELLEKAHKLRPGMKK 78 (132)
T ss_dssp CEEEEECS--CHHHHHHHHHHHHHTT-CEEEE--ESSHHHHHHHHHHSCCSEEEECSBCSSSBHHHHHHHHHHHCTTSEE
T ss_pred cEEEEEeC--CHHHHHHHHHHHHHCC-ceEEE--eCCHHHHHHHHhcCCCCEEEEecCCCCCchHHHHHHHHhhCCCCcE
Confidence 46677763 3445556666655542 34432 22332222232 24688776543 2345666666553 36777
Q ss_pred EEEecCCCcccccccccccccceeeeeecCCCHHHHHHHHHHHhc
Q 011163 411 IAVTSSDIEFRHFAEFDHESTRFSRFISSTFGNISLSQALEEIKN 455 (492)
Q Consensus 411 V~~~~~~gg~~e~v~~~~~~~g~~G~~~~~~~~~~l~~ai~~~~~ 455 (492)
|+... ..-.+..... ...|..||+..|.+.+.|.++|+.++.
T Consensus 79 i~~s~--~~~~~~~~~~-~~~ga~~~l~KP~~~~~L~~~i~~~~~ 120 (132)
T 3crn_A 79 IMVTG--YASLENSVFS-LNAGADAYIMKPVNPRDLLEKIKEKLD 120 (132)
T ss_dssp EEEES--CCCHHHHHHH-HHTTCSEEEESSCCHHHHHHHHHHHHH
T ss_pred EEEec--cccHHHHHHH-HhccchhhccCCCCHHHHHHHHHHHHh
Confidence 76543 2212221111 114667899999999999999988764
No 292
>3slg_A PBGP3 protein; structural genomics, seattle structural genomics center for infectious disease, ssgcid, melioidosis, glanders; 2.10A {Burkholderia pseudomallei}
Probab=31.46 E-value=41 Score=31.69 Aligned_cols=26 Identities=15% Similarity=-0.033 Sum_probs=19.5
Q ss_pred cCcHHHHHhHHHHHHHHC-CCeEEEEeecC
Q 011163 24 IGSLASYVTGLSGALQRK-GHLVEVILPKY 52 (492)
Q Consensus 24 ~GG~~~~~~~l~~~L~~~-Gh~V~vi~~~~ 52 (492)
.|.+| ..|+++|.++ ||+|.++....
T Consensus 33 tG~iG---~~l~~~L~~~~g~~V~~~~r~~ 59 (372)
T 3slg_A 33 NGFIG---HHLSKRILETTDWEVFGMDMQT 59 (372)
T ss_dssp SSHHH---HHHHHHHHHHSSCEEEEEESCC
T ss_pred CChHH---HHHHHHHHhCCCCEEEEEeCCh
Confidence 35555 5677889888 99999998653
No 293
>3dfu_A Uncharacterized protein from 6-phosphogluconate dehydrogenase-like family; putative rossmann-like dehydrogenase, structural genomics; HET: MSE; 2.07A {Corynebacterium glutamicum}
Probab=31.44 E-value=27 Score=30.91 Aligned_cols=34 Identities=18% Similarity=0.192 Sum_probs=25.0
Q ss_pred CCCceEEEEeeccccccccCcHHHHHhHHHHHHHHCCCeEEEEee
Q 011163 6 RNGFHIIHICTEMDPLVSIGSLASYVTGLSGALQRKGHLVEVILP 50 (492)
Q Consensus 6 ~~~mkIl~v~~~~~p~~~~GG~~~~~~~l~~~L~~~Gh~V~vi~~ 50 (492)
.++|||.+|... ..| ..|+..|.+.||+|..+..
T Consensus 4 ~~~mkI~IIG~G-----~~G------~sLA~~L~~~G~~V~~~~~ 37 (232)
T 3dfu_A 4 APRLRVGIFDDG-----SST------VNMAEKLDSVGHYVTVLHA 37 (232)
T ss_dssp CCCCEEEEECCS-----CCC------SCHHHHHHHTTCEEEECSS
T ss_pred CCCcEEEEEeeC-----HHH------HHHHHHHHHCCCEEEEecC
Confidence 356999998752 233 4688889999999887654
No 294
>3i4f_A 3-oxoacyl-[acyl-carrier protein] reductase; structural genomics, 3-oxoacyl-reductase, PSI-2; 2.39A {Bacillus thuringiensis serovar kurstakorganism_taxid} SCOP: c.2.1.0
Probab=31.37 E-value=41 Score=29.89 Aligned_cols=35 Identities=20% Similarity=0.116 Sum_probs=26.3
Q ss_pred CceEEEEeeccccccccCcHHHHHhHHHHHHHHCCCeEEEEeec
Q 011163 8 GFHIIHICTEMDPLVSIGSLASYVTGLSGALQRKGHLVEVILPK 51 (492)
Q Consensus 8 ~mkIl~v~~~~~p~~~~GG~~~~~~~l~~~L~~~Gh~V~vi~~~ 51 (492)
.||.++||- ..||+| ..+++.|.++|++|.++...
T Consensus 6 ~~k~vlVTG------as~gIG---~~~a~~l~~~G~~v~~~~~~ 40 (264)
T 3i4f_A 6 FVRHALITA------GTKGLG---KQVTEKLLAKGYSVTVTYHS 40 (264)
T ss_dssp CCCEEEETT------TTSHHH---HHHHHHHHHTTCEEEEEESS
T ss_pred ccCEEEEeC------CCchhH---HHHHHHHHHCCCEEEEEcCC
Confidence 468777774 346676 57889999999999887643
No 295
>3o38_A Short chain dehydrogenase; tuberculosis, ortholog from A non-pathogenic dehydrogenase, structural genomics; 1.95A {Mycobacterium smegmatis}
Probab=31.34 E-value=65 Score=28.62 Aligned_cols=34 Identities=9% Similarity=0.065 Sum_probs=24.0
Q ss_pred ceEEEEeeccccccccC-cHHHHHhHHHHHHHHCCCeEEEEeec
Q 011163 9 FHIIHICTEMDPLVSIG-SLASYVTGLSGALQRKGHLVEVILPK 51 (492)
Q Consensus 9 mkIl~v~~~~~p~~~~G-G~~~~~~~l~~~L~~~Gh~V~vi~~~ 51 (492)
.|.++|+- ..| |+| ..+++.|.++|++|.++...
T Consensus 22 ~k~vlITG------asg~GIG---~~~a~~l~~~G~~V~~~~r~ 56 (266)
T 3o38_A 22 GKVVLVTA------AAGTGIG---STTARRALLEGADVVISDYH 56 (266)
T ss_dssp TCEEEESS------CSSSSHH---HHHHHHHHHTTCEEEEEESC
T ss_pred CCEEEEEC------CCCCchH---HHHHHHHHHCCCEEEEecCC
Confidence 35666663 234 676 47888999999998887643
No 296
>3klo_A Transcriptional regulator VPST; REC domain, HTH domain, DNA-binding, transcription regulation; HET: C2E TAR; 2.80A {Vibrio cholerae} PDB: 3kln_A*
Probab=31.28 E-value=2.1e+02 Score=24.20 Aligned_cols=114 Identities=8% Similarity=-0.091 Sum_probs=61.4
Q ss_pred cEEEEEecCCChhHHHHHHHHHHHhCCCeEEEEeccCHHHHHHHH--hcCCEEEECCC-CCCCchHHHHHhh----cCCc
Q 011163 337 IQFVFTGTNKLPSASRALVSFQEELKDGIVIFVDSYDDALLHLIF--SGSDIILCHSF-HDPLLQVPLKALK----YGAA 409 (492)
Q Consensus 337 ~~lvivG~g~~~~~~~~l~~~~~~~~~~~v~~~~~~~~~~~~~~~--~~adi~v~pS~-~E~~glv~lEAma----~G~P 409 (492)
.+++|+-+. +...+.++...+....-.+.....-..+.+..++ ...|++++=-. -+.-|+-+++.+. ..+|
T Consensus 8 ~~IlivdD~--~~~~~~l~~~L~~~~~~~v~~~~~~~~~~~~~~~~~~~~dlvllD~~mp~~~G~~~~~~lr~~~~~~~~ 85 (225)
T 3klo_A 8 LNVRMLSDV--CMQSRLLKEALESKLPLALEITPFSELWLEENKPESRSIQMLVIDYSRISDDVLTDYSSFKHISCPDAK 85 (225)
T ss_dssp EEEEEESCC--SHHHHHHHHHHHHHSSEEEEEECGGGHHHHTTCSGGGGCCEEEEEGGGCCHHHHHHHHHHHHHHCTTCE
T ss_pred eEEEEEcCc--HHHHHHHHHHHhhCCCceEEEEeCCcHHHHHHHhhccCCCEEEEeCCCCCCCHHHHHHHHHHhhCCCCc
Confidence 567777643 3455666666654321222211111222221111 23687776432 2345666665543 3678
Q ss_pred eEEEecCCCcccccccccccccceeeeeecCCCHHHHHHHHHHHhc
Q 011163 410 PIAVTSSDIEFRHFAEFDHESTRFSRFISSTFGNISLSQALEEIKN 455 (492)
Q Consensus 410 vV~~~~~~gg~~e~v~~~~~~~g~~G~~~~~~~~~~l~~ai~~~~~ 455 (492)
+|+... ..-.+..... ...|..||+..|.+++.|..+|..++.
T Consensus 86 ii~lt~--~~~~~~~~~~-~~~Ga~~~l~Kp~~~~~L~~~i~~~~~ 128 (225)
T 3klo_A 86 EVIINC--PQDIEHKLLF-KWNNLAGVFYIDDDMDTLIKGMSKILQ 128 (225)
T ss_dssp EEEEEE--CTTCCHHHHT-TSTTEEEEEETTCCHHHHHHHHHHHHT
T ss_pred EEEEEC--CcchhHHHHH-HHhCCCEEEecCCCHHHHHHHHHHHHC
Confidence 777554 2222222111 124678999999999999999998875
No 297
>1n7h_A GDP-D-mannose-4,6-dehydratase; rossmann fold, SDR, short-chain dehydrogenase/reductase, LYA; HET: NDP GDP; 1.80A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 1n7g_A*
Probab=31.19 E-value=44 Score=31.61 Aligned_cols=25 Identities=24% Similarity=0.224 Sum_probs=19.3
Q ss_pred cCcHHHHHhHHHHHHHHCCCeEEEEeec
Q 011163 24 IGSLASYVTGLSGALQRKGHLVEVILPK 51 (492)
Q Consensus 24 ~GG~~~~~~~l~~~L~~~Gh~V~vi~~~ 51 (492)
.|++| ..+++.|.+.|++|.++...
T Consensus 37 tG~IG---~~l~~~L~~~g~~V~~~~r~ 61 (381)
T 1n7h_A 37 TGQDG---SYLTEFLLGKGYEVHGLIRR 61 (381)
T ss_dssp TSHHH---HHHHHHHHHTTCEEEEEECC
T ss_pred CchHH---HHHHHHHHHCCCEEEEEecC
Confidence 35665 56778899999999988754
No 298
>3r0j_A Possible two component system response transcript positive regulator PHOP; beta-alpha fold, winged helix-turn-helix; 2.50A {Mycobacterium tuberculosis}
Probab=31.17 E-value=2.6e+02 Score=24.16 Aligned_cols=111 Identities=10% Similarity=-0.049 Sum_probs=58.7
Q ss_pred cEEEEEecCCChhHHHHHHHHHHHhCCCeEEEEeccCHHHHHHHH--hcCCEEEECCC-CCCCchHHHHHhh---cCCce
Q 011163 337 IQFVFTGTNKLPSASRALVSFQEELKDGIVIFVDSYDDALLHLIF--SGSDIILCHSF-HDPLLQVPLKALK---YGAAP 410 (492)
Q Consensus 337 ~~lvivG~g~~~~~~~~l~~~~~~~~~~~v~~~~~~~~~~~~~~~--~~adi~v~pS~-~E~~glv~lEAma---~G~Pv 410 (492)
.+++|+-+. +...+.++...+..+ -.|.. ..+.++....+ ...|++++=-. -+.-|+-+++.+. ..+|+
T Consensus 24 ~~ILivdd~--~~~~~~l~~~L~~~g-~~v~~--~~~~~~al~~~~~~~~dlvllD~~lp~~~g~~~~~~lr~~~~~~~i 98 (250)
T 3r0j_A 24 ARVLVVDDE--ANIVELLSVSLKFQG-FEVYT--ATNGAQALDRARETRPDAVILDVXMPGMDGFGVLRRLRADGIDAPA 98 (250)
T ss_dssp CEEEEECSC--HHHHHHHHHHHHHTT-CEEEE--ESSHHHHHHHHHHHCCSEEEEESCCSSSCHHHHHHHHHHTTCCCCE
T ss_pred ceEEEEECC--HHHHHHHHHHHHHCC-CEEEE--ECCHHHHHHHHHhCCCCEEEEeCCCCCCCHHHHHHHHHhcCCCCCE
Confidence 566666532 334445555444432 23321 22332222222 23577666433 3445666666654 35677
Q ss_pred EEEecCCCcccccccccccccceeeeeecCCCHHHHHHHHHHHhc
Q 011163 411 IAVTSSDIEFRHFAEFDHESTRFSRFISSTFGNISLSQALEEIKN 455 (492)
Q Consensus 411 V~~~~~~gg~~e~v~~~~~~~g~~G~~~~~~~~~~l~~ai~~~~~ 455 (492)
|+... ..-.+.+... ...|..||+..|.+.+.|..+|..++.
T Consensus 99 i~lt~--~~~~~~~~~~-~~~Ga~~yl~Kp~~~~~L~~~i~~~~~ 140 (250)
T 3r0j_A 99 LFLTA--RDSLQDKIAG-LTLGGDDYVTKPFSLEEVVARLRVILR 140 (250)
T ss_dssp EEEEC--STTHHHHHHH-HTSTTCEEEESSCCHHHHHHHHHHHHH
T ss_pred EEEEC--CCCHHHHHHH-HHcCCcEEEeCCCCHHHHHHHHHHHHH
Confidence 77554 2222222111 114667899999999999999988763
No 299
>1ek6_A UDP-galactose 4-epimerase; short-chain dehydrogenase, galactosemia, isomerase; HET: NAI UPG; 1.50A {Homo sapiens} SCOP: c.2.1.2 PDB: 1ek5_A* 1hzj_A* 1i3k_A* 1i3l_A* 1i3m_A* 1i3n_A*
Probab=31.11 E-value=40 Score=31.31 Aligned_cols=25 Identities=24% Similarity=0.094 Sum_probs=19.0
Q ss_pred cCcHHHHHhHHHHHHHHCCCeEEEEeec
Q 011163 24 IGSLASYVTGLSGALQRKGHLVEVILPK 51 (492)
Q Consensus 24 ~GG~~~~~~~l~~~L~~~Gh~V~vi~~~ 51 (492)
.|++| ..+++.|.+.||+|.++...
T Consensus 11 tG~iG---~~l~~~L~~~g~~V~~~~r~ 35 (348)
T 1ek6_A 11 AGYIG---SHTVLELLEAGYLPVVIDNF 35 (348)
T ss_dssp TSHHH---HHHHHHHHHTTCCEEEEECS
T ss_pred CCHHH---HHHHHHHHHCCCEEEEEecC
Confidence 36666 56778899999999988653
No 300
>1yde_A Retinal dehydrogenase/reductase 3; oxidoreductase, structural genomics, structural genomics CON SGC; 2.40A {Homo sapiens} SCOP: c.2.1.2
Probab=31.03 E-value=54 Score=29.38 Aligned_cols=32 Identities=13% Similarity=0.202 Sum_probs=23.7
Q ss_pred eEEEEeeccccccccCcHHHHHhHHHHHHHHCCCeEEEEee
Q 011163 10 HIIHICTEMDPLVSIGSLASYVTGLSGALQRKGHLVEVILP 50 (492)
Q Consensus 10 kIl~v~~~~~p~~~~GG~~~~~~~l~~~L~~~Gh~V~vi~~ 50 (492)
|.++|+- ..||+|. .+++.|.++|++|.++..
T Consensus 10 k~vlVTG------as~gIG~---~ia~~l~~~G~~V~~~~r 41 (270)
T 1yde_A 10 KVVVVTG------GGRGIGA---GIVRAFVNSGARVVICDK 41 (270)
T ss_dssp CEEEEET------CSSHHHH---HHHHHHHHTTCEEEEEES
T ss_pred CEEEEEC------CCcHHHH---HHHHHHHHCCCEEEEEeC
Confidence 5666664 3577774 678889999999888754
No 301
>3bq9_A Predicted rossmann fold nucleotide-binding domain containing protein; structural genomics, PSI-2, protein structure initiative; 1.80A {Idiomarina baltica}
Probab=30.94 E-value=3.8e+02 Score=26.09 Aligned_cols=77 Identities=9% Similarity=-0.089 Sum_probs=42.5
Q ss_pred HHHHHHhcCCEEEECCCCCCCchH--HHHHhh---------cCCceEEEe---cCCCcccc-cc---cccccccceeeee
Q 011163 376 LLHLIFSGSDIILCHSFHDPLLQV--PLKALK---------YGAAPIAVT---SSDIEFRH-FA---EFDHESTRFSRFI 437 (492)
Q Consensus 376 ~~~~~~~~adi~v~pS~~E~~glv--~lEAma---------~G~PvV~~~---~~~gg~~e-~v---~~~~~~~g~~G~~ 437 (492)
....+...||.||.-.- |+|.- +.|++. .++|+|..+ + +|.-+ ++ .+.........++
T Consensus 238 RK~~mv~~SDAfIaLPG--G~GTLeELfEaLT~~QLg~~k~~~kPVVLlg~~n~--~gywd~Ll~~l~~~l~~~~~~~~i 313 (460)
T 3bq9_A 238 RLEAFVRCAHGIVIFPG--GAGTAEELLYLLGILMHPDNQRQSLPVILTGPASS--RDYFEALDEFIGATIGDEARQLYK 313 (460)
T ss_dssp HHHHHHHHCSEEEECSC--SHHHHHHHHHHHHHHTSGGGTTCCCCEEEEECGGG--HHHHHHHHHHHHHHTCTTGGGGCE
T ss_pred HHHHHHHhCCEEEEcCC--CcchHHHHHHHHHHHhhccccCCCCCEEEEecCCc--cchhhHHHHHHHHHhcchhhcCcE
Confidence 34456678898876544 56644 466665 589999986 2 23222 21 1100001112233
Q ss_pred ecCCCHHHHHHHHHHHhcC
Q 011163 438 SSTFGNISLSQALEEIKNN 456 (492)
Q Consensus 438 ~~~~~~~~l~~ai~~~~~~ 456 (492)
+-.+|++++.+.|...+..
T Consensus 314 iv~ddpeEal~~l~~~~~~ 332 (460)
T 3bq9_A 314 IIIDDPAAVAQHMHAGMAA 332 (460)
T ss_dssp EEESCHHHHHHHHHHHHHH
T ss_pred EEeCCHHHHHHHHHHHHHH
Confidence 3356888888888776544
No 302
>1y1p_A ARII, aldehyde reductase II; rossmann fold, short chain dehydrogenase reductase, oxidoreductase; HET: NMN AMP; 1.60A {Sporidiobolus salmonicolor} SCOP: c.2.1.2 PDB: 1ujm_A* 1zze_A
Probab=30.93 E-value=44 Score=30.81 Aligned_cols=24 Identities=21% Similarity=0.122 Sum_probs=18.5
Q ss_pred cCcHHHHHhHHHHHHHHCCCeEEEEee
Q 011163 24 IGSLASYVTGLSGALQRKGHLVEVILP 50 (492)
Q Consensus 24 ~GG~~~~~~~l~~~L~~~Gh~V~vi~~ 50 (492)
.|++| ..+++.|.++||+|.++..
T Consensus 20 tG~iG---~~l~~~L~~~g~~V~~~~r 43 (342)
T 1y1p_A 20 NGFVA---SHVVEQLLEHGYKVRGTAR 43 (342)
T ss_dssp TSHHH---HHHHHHHHHTTCEEEEEES
T ss_pred ccHHH---HHHHHHHHHCCCEEEEEeC
Confidence 46666 4567889999999988864
No 303
>2c20_A UDP-glucose 4-epimerase; carbohydrate metabolism, galactose metabolism, isomerase, NAD, spine; HET: NAD; 2.7A {Bacillus anthracis}
Probab=30.88 E-value=45 Score=30.72 Aligned_cols=27 Identities=19% Similarity=0.049 Sum_probs=19.1
Q ss_pred CcHHHHHhHHHHHHHHCCCeEEEEeec
Q 011163 25 GSLASYVTGLSGALQRKGHLVEVILPK 51 (492)
Q Consensus 25 GG~~~~~~~l~~~L~~~Gh~V~vi~~~ 51 (492)
||.+-.=..+++.|.++||+|.++...
T Consensus 8 GatG~iG~~l~~~L~~~g~~V~~~~r~ 34 (330)
T 2c20_A 8 GGAGYIGSHAVKKLVDEGLSVVVVDNL 34 (330)
T ss_dssp TTTSHHHHHHHHHHHHTTCEEEEEECC
T ss_pred CCCcHHHHHHHHHHHhCCCEEEEEeCC
Confidence 333333466778899999999988753
No 304
>3f2v_A General stress protein 14; alpha-beta protein., structural genomics, PSI-2, protein structure initiative; HET: FMN; 2.00A {Treponema denticola}
Probab=30.84 E-value=34 Score=29.24 Aligned_cols=37 Identities=14% Similarity=0.087 Sum_probs=27.8
Q ss_pred ceEEEEeeccccccccCcHHHHHhHHHHHHHHCCCeEEEEee
Q 011163 9 FHIIHICTEMDPLVSIGSLASYVTGLSGALQRKGHLVEVILP 50 (492)
Q Consensus 9 mkIl~v~~~~~p~~~~GG~~~~~~~l~~~L~~~Gh~V~vi~~ 50 (492)
||||+|.. +|.. ++ ..+...+++++.+.|++|.++-.
T Consensus 2 mkiLiI~g--sp~~--~~-s~l~~~l~~~~~~~g~ev~~~dL 38 (192)
T 3f2v_A 2 PKTLIILA--HPNI--SQ-STVHKHWSDAVRQHTDRFTVHEL 38 (192)
T ss_dssp CCEEEEEC--CTTG--GG-CSHHHHHHHHHTTCTTTEEEEEH
T ss_pred CEEEEEEe--CCCc--cH-HHHHHHHHHHHHhCCCeEEEEEc
Confidence 79999987 4532 22 36777888888888999988864
No 305
>3ghy_A Ketopantoate reductase protein; oxidoreductase, NAD-binding domain, PSI-2, NYSGXRC, structur genomics, protein structure initiative; 2.00A {Ralstonia solanacearum}
Probab=30.81 E-value=39 Score=31.59 Aligned_cols=32 Identities=22% Similarity=0.356 Sum_probs=24.9
Q ss_pred CceEEEEeeccccccccCcHHHHHhHHHHHHHHCCCeEEEEee
Q 011163 8 GFHIIHICTEMDPLVSIGSLASYVTGLSGALQRKGHLVEVILP 50 (492)
Q Consensus 8 ~mkIl~v~~~~~p~~~~GG~~~~~~~l~~~L~~~Gh~V~vi~~ 50 (492)
.|||++|.. |.+|.. ++..|.+.||+|+++..
T Consensus 3 ~mkI~IiGa--------G~~G~~---~a~~L~~~g~~V~~~~r 34 (335)
T 3ghy_A 3 LTRICIVGA--------GAVGGY---LGARLALAGEAINVLAR 34 (335)
T ss_dssp CCCEEEESC--------CHHHHH---HHHHHHHTTCCEEEECC
T ss_pred CCEEEEECc--------CHHHHH---HHHHHHHCCCEEEEEEC
Confidence 489998764 666654 56778899999999985
No 306
>1orr_A CDP-tyvelose-2-epimerase; rossmann fold, short-chain dehydrogenase/reductase, isomeras; HET: NAD CDP; 1.50A {Salmonella typhi} SCOP: c.2.1.2
Probab=30.80 E-value=44 Score=30.93 Aligned_cols=24 Identities=21% Similarity=0.138 Sum_probs=18.5
Q ss_pred cCcHHHHHhHHHHHHHHCCCeEEEEee
Q 011163 24 IGSLASYVTGLSGALQRKGHLVEVILP 50 (492)
Q Consensus 24 ~GG~~~~~~~l~~~L~~~Gh~V~vi~~ 50 (492)
.|++| ..+++.|.++|++|.++..
T Consensus 10 tG~iG---~~l~~~L~~~g~~V~~~~r 33 (347)
T 1orr_A 10 CGFLG---SNLASFALSQGIDLIVFDN 33 (347)
T ss_dssp TSHHH---HHHHHHHHHTTCEEEEEEC
T ss_pred CchhH---HHHHHHHHhCCCEEEEEeC
Confidence 46666 5677889999999988864
No 307
>3op4_A 3-oxoacyl-[acyl-carrier protein] reductase; 3-ketoacyl-(acyl-carrier-protein) reductase; HET: MSE NAP; 1.60A {Vibrio cholerae o1 biovar el tor} SCOP: c.2.1.2 PDB: 3rsh_A* 3rro_A* 4i08_A* 3tzk_A 3tzc_A* 3u09_A 3tzh_A 1q7b_A* 1i01_A* 1q7c_A* 2cf2_E
Probab=30.76 E-value=52 Score=29.03 Aligned_cols=33 Identities=9% Similarity=0.084 Sum_probs=24.6
Q ss_pred ceEEEEeeccccccccCcHHHHHhHHHHHHHHCCCeEEEEee
Q 011163 9 FHIIHICTEMDPLVSIGSLASYVTGLSGALQRKGHLVEVILP 50 (492)
Q Consensus 9 mkIl~v~~~~~p~~~~GG~~~~~~~l~~~L~~~Gh~V~vi~~ 50 (492)
-|+++||- ..||+| ..+++.|.++|++|.++..
T Consensus 9 gk~~lVTG------as~gIG---~a~a~~l~~~G~~V~~~~r 41 (248)
T 3op4_A 9 GKVALVTG------ASRGIG---KAIAELLAERGAKVIGTAT 41 (248)
T ss_dssp TCEEEESS------CSSHHH---HHHHHHHHHTTCEEEEEES
T ss_pred CCEEEEeC------CCCHHH---HHHHHHHHHCCCEEEEEeC
Confidence 36777774 357777 4678899999999987754
No 308
>3enk_A UDP-glucose 4-epimerase; seattle structural genomics center for infectious disease, ssgcid, isomerase, NAD; HET: NAD GUD; 1.90A {Burkholderia pseudomallei 1710B} SCOP: c.2.1.0
Probab=30.76 E-value=47 Score=30.76 Aligned_cols=34 Identities=15% Similarity=0.006 Sum_probs=24.2
Q ss_pred CceEEEEeeccccccccCcHHHHHhHHHHHHHHCCCeEEEEeec
Q 011163 8 GFHIIHICTEMDPLVSIGSLASYVTGLSGALQRKGHLVEVILPK 51 (492)
Q Consensus 8 ~mkIl~v~~~~~p~~~~GG~~~~~~~l~~~L~~~Gh~V~vi~~~ 51 (492)
.|+|++ |- ..||+| ..+++.|.++||+|.++...
T Consensus 5 ~~~vlV-TG------atG~iG---~~l~~~L~~~G~~V~~~~r~ 38 (341)
T 3enk_A 5 KGTILV-TG------GAGYIG---SHTAVELLAHGYDVVIADNL 38 (341)
T ss_dssp SCEEEE-ET------TTSHHH---HHHHHHHHHTTCEEEEECCC
T ss_pred CcEEEE-ec------CCcHHH---HHHHHHHHHCCCcEEEEecC
Confidence 467755 42 246777 46788899999999888654
No 309
>2woo_A ATPase GET3; tail-anchored, membrane protein, targeting factor, endoplasmic reticulum, TRC40, ATP-binding, golgi apparatus; 3.01A {Schizosaccharomyces pombe}
Probab=30.57 E-value=46 Score=31.09 Aligned_cols=37 Identities=14% Similarity=0.141 Sum_probs=27.8
Q ss_pred CceEEEEeeccccccccCcHHH--HHhHHHHHHHHCCCeEEEEeec
Q 011163 8 GFHIIHICTEMDPLVSIGSLAS--YVTGLSGALQRKGHLVEVILPK 51 (492)
Q Consensus 8 ~mkIl~v~~~~~p~~~~GG~~~--~~~~l~~~L~~~Gh~V~vi~~~ 51 (492)
..+|++++. .||+|+ ...+|+.+|+++|++|.++..+
T Consensus 18 ~~~i~v~sg-------kGGvGKTTva~~LA~~lA~~G~rVllvD~D 56 (329)
T 2woo_A 18 SLKWIFVGG-------KGGVGKTTTSCSLAIQMSKVRSSVLLISTD 56 (329)
T ss_dssp TCCEEEEEC-------SSSSSHHHHHHHHHHHHHTSSSCEEEEECC
T ss_pred CCEEEEEeC-------CCCCcHHHHHHHHHHHHHHCCCeEEEEECC
Confidence 356766553 377766 5678999999999999999765
No 310
>1xgk_A Nitrogen metabolite repression regulator NMRA; rossmann fold, transcriptional regulation, short chain dehyd reductase, NADP binding; 1.40A {Emericella nidulans} SCOP: c.2.1.2 PDB: 1k6x_A* 1k6j_A 1k6i_A* 1ti7_A* 2vus_A 2vut_A* 2vuu_A*
Probab=30.51 E-value=42 Score=31.59 Aligned_cols=34 Identities=18% Similarity=0.154 Sum_probs=23.9
Q ss_pred CceEEEEeeccccccccCcHHHHHhHHHHHHHHCCCeEEEEeec
Q 011163 8 GFHIIHICTEMDPLVSIGSLASYVTGLSGALQRKGHLVEVILPK 51 (492)
Q Consensus 8 ~mkIl~v~~~~~p~~~~GG~~~~~~~l~~~L~~~Gh~V~vi~~~ 51 (492)
.|+|+++. .+|++| ..+++.|.++||+|.+++..
T Consensus 5 ~~~ilVtG-------atG~iG---~~l~~~L~~~g~~V~~~~R~ 38 (352)
T 1xgk_A 5 KKTIAVVG-------ATGRQG---ASLIRVAAAVGHHVRAQVHS 38 (352)
T ss_dssp CCCEEEES-------TTSHHH---HHHHHHHHHTTCCEEEEESC
T ss_pred CCEEEEEC-------CCCHHH---HHHHHHHHhCCCEEEEEECC
Confidence 46776533 246666 45678888999999988754
No 311
>1cyd_A Carbonyl reductase; short-chain dehydrogenase, oxidoreductase; HET: NAP; 1.80A {Mus musculus} SCOP: c.2.1.2
Probab=30.49 E-value=55 Score=28.54 Aligned_cols=24 Identities=17% Similarity=0.112 Sum_probs=19.0
Q ss_pred cCcHHHHHhHHHHHHHHCCCeEEEEee
Q 011163 24 IGSLASYVTGLSGALQRKGHLVEVILP 50 (492)
Q Consensus 24 ~GG~~~~~~~l~~~L~~~Gh~V~vi~~ 50 (492)
.||+|. .+++.|.++|++|.++..
T Consensus 16 sggiG~---~~a~~l~~~G~~V~~~~r 39 (244)
T 1cyd_A 16 GKGIGR---DTVKALHASGAKVVAVTR 39 (244)
T ss_dssp TSHHHH---HHHHHHHHTTCEEEEEES
T ss_pred CchHHH---HHHHHHHHCCCEEEEEeC
Confidence 467764 678889999999988764
No 312
>2b69_A UDP-glucuronate decarboxylase 1; UDP-glucoronic acid decarboxylase, structural genomics, STRU genomics consortium, SGC, lyase; HET: MSE NAD UDP; 1.21A {Homo sapiens} SCOP: c.2.1.2 PDB: 4ef7_A*
Probab=30.45 E-value=46 Score=30.90 Aligned_cols=25 Identities=28% Similarity=0.319 Sum_probs=19.0
Q ss_pred cCcHHHHHhHHHHHHHHCCCeEEEEeec
Q 011163 24 IGSLASYVTGLSGALQRKGHLVEVILPK 51 (492)
Q Consensus 24 ~GG~~~~~~~l~~~L~~~Gh~V~vi~~~ 51 (492)
.|++| ..+++.|.+.|++|.++...
T Consensus 36 tG~iG---~~l~~~L~~~g~~V~~~~r~ 60 (343)
T 2b69_A 36 AGFVG---SHLTDKLMMDGHEVTVVDNF 60 (343)
T ss_dssp TSHHH---HHHHHHHHHTTCEEEEEECC
T ss_pred ccHHH---HHHHHHHHHCCCEEEEEeCC
Confidence 35555 56778899999999988754
No 313
>1evy_A Glycerol-3-phosphate dehydrogenase; rossmann fold, oxidoreductase; HET: MYS; 1.75A {Leishmania mexicana} SCOP: a.100.1.6 c.2.1.6 PDB: 1evz_A* 1jdj_A* 1m66_A* 1m67_A* 1n1e_A* 1n1g_A*
Probab=30.41 E-value=29 Score=32.92 Aligned_cols=37 Identities=19% Similarity=0.052 Sum_probs=25.6
Q ss_pred ccCCCc-eEEEEeeccccccccCcHHHHHhHHHHHHHHCCCeEEEEeec
Q 011163 4 WLRNGF-HIIHICTEMDPLVSIGSLASYVTGLSGALQRKGHLVEVILPK 51 (492)
Q Consensus 4 ~~~~~m-kIl~v~~~~~p~~~~GG~~~~~~~l~~~L~~~Gh~V~vi~~~ 51 (492)
+....| ||++|.. |.+| ..++..|.+.||+|.++...
T Consensus 10 ~~~m~M~kI~iIG~--------G~mG---~~la~~L~~~G~~V~~~~r~ 47 (366)
T 1evy_A 10 DELLYLNKAVVFGS--------GAFG---TALAMVLSKKCREVCVWHMN 47 (366)
T ss_dssp CCCCCEEEEEEECC--------SHHH---HHHHHHHTTTEEEEEEECSC
T ss_pred hHhhccCeEEEECC--------CHHH---HHHHHHHHhCCCEEEEEECC
Confidence 344446 8988764 5555 45677888999999988643
No 314
>2ixd_A LMBE-related protein; hexamer, deacetylase, rossman fold, zinc-dependent metalloenzyme, hydrolase; 1.8A {Bacillus cereus}
Probab=30.33 E-value=73 Score=28.24 Aligned_cols=42 Identities=17% Similarity=0.167 Sum_probs=28.8
Q ss_pred CCceEEEEeeccccccccCcHHHHHhHHHHHHHHCCCeEEEEeecCCC
Q 011163 7 NGFHIIHICTEMDPLVSIGSLASYVTGLSGALQRKGHLVEVILPKYAC 54 (492)
Q Consensus 7 ~~mkIl~v~~~~~p~~~~GG~~~~~~~l~~~L~~~Gh~V~vi~~~~~~ 54 (492)
++++||+|++ +|- -....+......+.+.|++|.+++...+.
T Consensus 2 ~~~~vL~v~a--HPD----De~l~~Ggtia~~~~~G~~V~vv~lT~G~ 43 (242)
T 2ixd_A 2 SGLHILAFGA--HAD----DVEIGMAGTIAKYTKQGYEVGICDLTEAD 43 (242)
T ss_dssp CCCSEEEEES--STT----HHHHHHHHHHHHHHHTTCCEEEEEEECCT
T ss_pred CCccEEEEEe--CCC----hHHHhHHHHHHHHHHCCCeEEEEEEcCCC
Confidence 3478999998 563 23333444555677899999999876554
No 315
>1t2a_A GDP-mannose 4,6 dehydratase; structural genomics consortium, rossman-fold, short-chain dehydrogenase/reductase, SDR, structural genomics,lyase; HET: NDP GDP; 1.84A {Homo sapiens} SCOP: c.2.1.2
Probab=30.30 E-value=47 Score=31.35 Aligned_cols=25 Identities=28% Similarity=0.240 Sum_probs=19.3
Q ss_pred cCcHHHHHhHHHHHHHHCCCeEEEEeec
Q 011163 24 IGSLASYVTGLSGALQRKGHLVEVILPK 51 (492)
Q Consensus 24 ~GG~~~~~~~l~~~L~~~Gh~V~vi~~~ 51 (492)
.|++| ..+++.|.++|++|.++...
T Consensus 33 tG~iG---~~l~~~L~~~g~~V~~~~r~ 57 (375)
T 1t2a_A 33 TGQDG---SYLAEFLLEKGYEVHGIVRR 57 (375)
T ss_dssp TSHHH---HHHHHHHHHTTCEEEEEECC
T ss_pred CchHH---HHHHHHHHHCCCEEEEEECC
Confidence 35565 56778899999999988754
No 316
>3q9s_A DNA-binding response regulator; DNA binding protein; 2.40A {Deinococcus radiodurans}
Probab=30.19 E-value=2.2e+02 Score=24.68 Aligned_cols=69 Identities=13% Similarity=-0.049 Sum_probs=39.0
Q ss_pred CCEEEECCC-CCCCchHHHHHhh--cCCceEEEecCCCcccccccccccccceeeeeecCCCHHHHHHHHHHHhc
Q 011163 384 SDIILCHSF-HDPLLQVPLKALK--YGAAPIAVTSSDIEFRHFAEFDHESTRFSRFISSTFGNISLSQALEEIKN 455 (492)
Q Consensus 384 adi~v~pS~-~E~~glv~lEAma--~G~PvV~~~~~~gg~~e~v~~~~~~~g~~G~~~~~~~~~~l~~ai~~~~~ 455 (492)
.|++++=-. -+.-|+-+++.+. ..+|+|+... ..-.+.+... ...|..||+..|.+++.|.++|..++.
T Consensus 82 ~DlvllD~~lp~~~G~~l~~~lr~~~~~~iI~lt~--~~~~~~~~~a-~~~Ga~~yl~Kp~~~~~L~~~i~~~l~ 153 (249)
T 3q9s_A 82 PDLILLDLGLPDFDGGDVVQRLRKNSALPIIVLTA--RDTVEEKVRL-LGLGADDYLIKPFHPDELLARVKVQLR 153 (249)
T ss_dssp CSEEEEECCSCHHHHHHHHHHHHTTCCCCEEEEES--CCSHHHHHHH-HHHTCSEEEESSCCHHHHHHHHHHHHC
T ss_pred CCEEEEcCCCCCCCHHHHHHHHHcCCCCCEEEEEC--CCCHHHHHHH-HHCCCcEEEECCCCHHHHHHHHHHHHh
Confidence 466555332 2233444444443 3467776554 2222222111 113567899999999999999998764
No 317
>3g0o_A 3-hydroxyisobutyrate dehydrogenase; NAD(P), valine catabolism, tartaric acid, target 11128H, NYSGXRC, PSI-2, structural genomics; HET: TLA; 1.80A {Salmonella typhimurium}
Probab=30.08 E-value=48 Score=30.40 Aligned_cols=34 Identities=21% Similarity=0.159 Sum_probs=24.2
Q ss_pred CCCceEEEEeeccccccccCcHHHHHhHHHHHHHHCCCeEEEEee
Q 011163 6 RNGFHIIHICTEMDPLVSIGSLASYVTGLSGALQRKGHLVEVILP 50 (492)
Q Consensus 6 ~~~mkIl~v~~~~~p~~~~GG~~~~~~~l~~~L~~~Gh~V~vi~~ 50 (492)
.+.|||.+|.. |-+| ..++..|.+.||+|.++..
T Consensus 5 ~~~~~I~iIG~--------G~mG---~~~a~~l~~~G~~V~~~dr 38 (303)
T 3g0o_A 5 GTDFHVGIVGL--------GSMG---MGAARSCLRAGLSTWGADL 38 (303)
T ss_dssp --CCEEEEECC--------SHHH---HHHHHHHHHTTCEEEEECS
T ss_pred CCCCeEEEECC--------CHHH---HHHHHHHHHCCCeEEEEEC
Confidence 44589988753 4444 4678889999999988854
No 318
>3ppi_A 3-hydroxyacyl-COA dehydrogenase type-2; ssgcid, dehydrogenas mycobacterium avium, structural genomics; 2.00A {Mycobacterium avium}
Probab=30.04 E-value=59 Score=29.23 Aligned_cols=32 Identities=16% Similarity=0.075 Sum_probs=24.0
Q ss_pred eEEEEeeccccccccCcHHHHHhHHHHHHHHCCCeEEEEee
Q 011163 10 HIIHICTEMDPLVSIGSLASYVTGLSGALQRKGHLVEVILP 50 (492)
Q Consensus 10 kIl~v~~~~~p~~~~GG~~~~~~~l~~~L~~~Gh~V~vi~~ 50 (492)
|+++||- ..||+| ..+++.|.++|++|.++..
T Consensus 31 k~vlVTG------as~GIG---~aia~~l~~~G~~Vi~~~r 62 (281)
T 3ppi_A 31 ASAIVSG------GAGGLG---EATVRRLHADGLGVVIADL 62 (281)
T ss_dssp EEEEEET------TTSHHH---HHHHHHHHHTTCEEEEEES
T ss_pred CEEEEEC------CCChHH---HHHHHHHHHCCCEEEEEeC
Confidence 6667774 346776 5688999999999887754
No 319
>3e48_A Putative nucleoside-diphosphate-sugar epimerase; alpha-beta protein., structural genomics, PSI-2, protein STR initiative; 1.60A {Staphylococcus aureus subsp}
Probab=29.88 E-value=38 Score=30.57 Aligned_cols=33 Identities=9% Similarity=0.122 Sum_probs=23.1
Q ss_pred ceEEEEeeccccccccCcHHHHHhHHHHHHHHC-CCeEEEEeec
Q 011163 9 FHIIHICTEMDPLVSIGSLASYVTGLSGALQRK-GHLVEVILPK 51 (492)
Q Consensus 9 mkIl~v~~~~~p~~~~GG~~~~~~~l~~~L~~~-Gh~V~vi~~~ 51 (492)
|||+++. .+|++|.. +++.|.+. |++|.+++..
T Consensus 1 M~ilVtG-------atG~iG~~---l~~~L~~~~g~~V~~~~R~ 34 (289)
T 3e48_A 1 MNIMLTG-------ATGHLGTH---ITNQAIANHIDHFHIGVRN 34 (289)
T ss_dssp CCEEEET-------TTSHHHHH---HHHHHHHTTCTTEEEEESS
T ss_pred CEEEEEc-------CCchHHHH---HHHHHhhCCCCcEEEEECC
Confidence 7876643 24666654 55568887 9999999864
No 320
>1dxh_A Ornithine carbamoyltransferase; transcarbamylase; 2.50A {Pseudomonas aeruginosa} SCOP: c.78.1.1 c.78.1.1 PDB: 1ort_A
Probab=29.74 E-value=1.5e+02 Score=27.68 Aligned_cols=105 Identities=11% Similarity=0.111 Sum_probs=0.0
Q ss_pred ecCCCCCCCcCCCCCcccccccCccCccChHHHHHHHHHHhC-CCCCCCceEEEEEeccccccCHHHHHHHHHHHhHcCc
Q 011163 259 APCGFDSSTWDPSNDKFLTENYCAEDMKGKTVCKVTLQQQLG-LSKDASTIVVGCIFSDVSDVFLENLKAVVRGAKMRGI 337 (492)
Q Consensus 259 I~nGvd~~~f~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~lg-~~~~~~~~~i~~~grl~~~Kg~~~li~a~~~l~~~~~ 337 (492)
|.||-+ +.++|. ..-.+--.+++.+| --.+ ..+.++|-. ...=...++.++..+ ++
T Consensus 125 VINa~~-~~~HPt---------------Q~LaDl~Ti~e~~g~~l~g---l~va~vGD~-~~~va~Sl~~~~~~~---G~ 181 (335)
T 1dxh_A 125 VFNGLT-DEYHPT---------------QMLADVLTMREHSDKPLHD---ISYAYLGDA-RNNMGNSLLLIGAKL---GM 181 (335)
T ss_dssp EEEEEC-SSCCHH---------------HHHHHHHHHHHTCSSCGGG---CEEEEESCC-SSHHHHHHHHHHHHT---TC
T ss_pred EEcCCC-CCCCcH---------------HHHHHHHHHHHHcCCCcCC---eEEEEecCC-ccchHHHHHHHHHHc---CC
Q ss_pred EEEEEecC---CChhHHHHHHHHHHHhCCCeEEEEeccCHHHHHHHHhcCCEEEECCC
Q 011163 338 QFVFTGTN---KLPSASRALVSFQEELKDGIVIFVDSYDDALLHLIFSGSDIILCHSF 392 (492)
Q Consensus 338 ~lvivG~g---~~~~~~~~l~~~~~~~~~~~v~~~~~~~~~~~~~~~~~adi~v~pS~ 392 (492)
++.++++. ++++..+.+++.+++.+ .++.+. +...+.+..||++....+
T Consensus 182 ~v~~~~P~~~~p~~~~~~~~~~~a~~~G-~~v~~~-----~d~~eav~~aDvvytd~w 233 (335)
T 1dxh_A 182 DVRIAAPKALWPHDEFVAQCKKFAEESG-AKLTLT-----EDPKEAVKGVDFVHTDVW 233 (335)
T ss_dssp EEEEECCGGGSCCHHHHHHHHHHHHHHT-CEEEEE-----SCHHHHTTTCSEEEECCC
T ss_pred EEEEECCcccCCCHHHHHHHHHHHHHcC-CeEEEE-----eCHHHHhCCCCEEEeCCc
No 321
>3k3p_A D-alanine--D-alanine ligase; D-alanyl-alanine synthetase, ATP-binding, cell shape, cell W biogenesis/degradation, magnesium, manganese; 2.23A {Streptococcus mutans}
Probab=29.70 E-value=24 Score=33.94 Aligned_cols=49 Identities=8% Similarity=-0.014 Sum_probs=28.5
Q ss_pred CccccCCCceEEEEeeccccccccCcHHHHHhHHHHHHHHCCCeEEEEeec
Q 011163 1 MEKWLRNGFHIIHICTEMDPLVSIGSLASYVTGLSGALQRKGHLVEVILPK 51 (492)
Q Consensus 1 ~~~~~~~~mkIl~v~~~~~p~~~~GG~~~~~~~l~~~L~~~Gh~V~vi~~~ 51 (492)
|+.+.+++|||+++.-...+. .---=.......++|.+.||+|..+...
T Consensus 30 ~~~~~m~~~~v~vl~GG~S~E--~evSl~Sa~~v~~al~~~~~~v~~i~i~ 78 (383)
T 3k3p_A 30 MGRGSMSKETLVLLYGGRSAE--RDVSVLSAESVMRAINYDNFLVKTYFIT 78 (383)
T ss_dssp -------CEEEEEEEECSSTT--HHHHHHHHHHHHHHSCTTTEEEEEEEEC
T ss_pred cccccccCCeEEEEeCCCCCc--chHHHHHHHHHHHHhhhcCCEEEEEEec
Confidence 345566678999988643331 0111144566778888999999998865
No 322
>2gwr_A DNA-binding response regulator MTRA; two-component regulatory system, transcription regulation, phosphorylation, OMPR family; 2.10A {Mycobacterium tuberculosis} PDB: 3nhz_A
Probab=29.61 E-value=2.6e+02 Score=23.81 Aligned_cols=112 Identities=10% Similarity=-0.020 Sum_probs=61.6
Q ss_pred cEEEEEecCCChhHHHHHHHHHHHhCCCeEEEEeccCHHHHHHH-HhcCCEEEECCC-CCCCchHHHHHhh--cCCceEE
Q 011163 337 IQFVFTGTNKLPSASRALVSFQEELKDGIVIFVDSYDDALLHLI-FSGSDIILCHSF-HDPLLQVPLKALK--YGAAPIA 412 (492)
Q Consensus 337 ~~lvivG~g~~~~~~~~l~~~~~~~~~~~v~~~~~~~~~~~~~~-~~~adi~v~pS~-~E~~glv~lEAma--~G~PvV~ 412 (492)
.+++|+.+ ++...+.++...+..+ -.|....... +.+..+ -...|++++=-. -+.-|+.+++.+. ..+|+|+
T Consensus 6 ~~ILivdd--~~~~~~~l~~~L~~~g-~~v~~~~~~~-~al~~l~~~~~dlvilD~~l~~~~g~~~~~~lr~~~~~~ii~ 81 (238)
T 2gwr_A 6 QRILVVDD--DASLAEMLTIVLRGEG-FDTAVIGDGT-QALTAVRELRPDLVLLDLMLPGMNGIDVCRVLRADSGVPIVM 81 (238)
T ss_dssp CEEEEECS--CHHHHHHHHHHHHHTT-CEEEEECCGG-GHHHHHHHHCCSEEEEESSCSSSCHHHHHHHHHTTCCCCEEE
T ss_pred CeEEEEeC--CHHHHHHHHHHHHHCC-CEEEEECCHH-HHHHHHHhCCCCEEEEeCCCCCCCHHHHHHHHHhCCCCcEEE
Confidence 46777763 3445556666555532 3443322222 222111 124688776543 3445666666653 3678777
Q ss_pred EecCCCcccccccccccccceeeeeecCCCHHHHHHHHHHHhc
Q 011163 413 VTSSDIEFRHFAEFDHESTRFSRFISSTFGNISLSQALEEIKN 455 (492)
Q Consensus 413 ~~~~~gg~~e~v~~~~~~~g~~G~~~~~~~~~~l~~ai~~~~~ 455 (492)
... ..-.+.+... ...|..||+..|.+++.|.++|..++.
T Consensus 82 lt~--~~~~~~~~~~-~~~Ga~~~l~Kp~~~~~L~~~i~~~~~ 121 (238)
T 2gwr_A 82 LTA--KTDTVDVVLG-LESGADDYIMKPFKPKELVARVRARLR 121 (238)
T ss_dssp EEE--TTCCSCHHHH-HHTTCCEEEEESCCHHHHHHHHHHHCC
T ss_pred EeC--CCCHHHHHHH-HHCCCCEEEeCCCCHHHHHHHHHHHHh
Confidence 554 2222222111 114667899999999999999998764
No 323
>3gpi_A NAD-dependent epimerase/dehydratase; structural genomics, unknown function, PSI-2, protein structure initiative; 1.44A {Methylobacillus flagellatus KT}
Probab=29.57 E-value=54 Score=29.47 Aligned_cols=34 Identities=24% Similarity=0.184 Sum_probs=24.2
Q ss_pred CceEEEEeeccccccccCcHHHHHhHHHHHHHHCCCeEEEEeecC
Q 011163 8 GFHIIHICTEMDPLVSIGSLASYVTGLSGALQRKGHLVEVILPKY 52 (492)
Q Consensus 8 ~mkIl~v~~~~~p~~~~GG~~~~~~~l~~~L~~~Gh~V~vi~~~~ 52 (492)
.|||+++. .|++|. .|++.|.++||+|.++....
T Consensus 3 ~~~ilVtG--------aG~iG~---~l~~~L~~~g~~V~~~~r~~ 36 (286)
T 3gpi_A 3 LSKILIAG--------CGDLGL---ELARRLTAQGHEVTGLRRSA 36 (286)
T ss_dssp CCCEEEEC--------CSHHHH---HHHHHHHHTTCCEEEEECTT
T ss_pred CCcEEEEC--------CCHHHH---HHHHHHHHCCCEEEEEeCCc
Confidence 36786532 155664 57788999999999998653
No 324
>3czc_A RMPB; alpha/beta sandwich, phosphotransferase system, transferase, transport; 2.02A {Streptococcus mutans}
Probab=29.44 E-value=78 Score=23.98 Aligned_cols=36 Identities=17% Similarity=0.287 Sum_probs=24.0
Q ss_pred CceEEEEeeccccccccC-cHHHHHh-HHHHHHHHCCCe-EEEEee
Q 011163 8 GFHIIHICTEMDPLVSIG-SLASYVT-GLSGALQRKGHL-VEVILP 50 (492)
Q Consensus 8 ~mkIl~v~~~~~p~~~~G-G~~~~~~-~l~~~L~~~Gh~-V~vi~~ 50 (492)
.+||+++|.. | |....+. .+-+.+.++|.+ +.+-+.
T Consensus 18 ~~kIlvvC~s-------G~gTS~m~~~kl~~~~~~~gi~~~~i~~~ 56 (110)
T 3czc_A 18 MVKVLTACGN-------GMGSSMVIKMKVENALRQLGVSDIESASC 56 (110)
T ss_dssp CEEEEEECCC-------CHHHHHHHHHHHHHHHHHTTCCCEEEEEE
T ss_pred CcEEEEECCC-------cHHHHHHHHHHHHHHHHHcCCCeEEEEEe
Confidence 3689998862 2 3444555 677788889988 665543
No 325
>3igf_A ALL4481 protein; two-domained protein consisting of the N-terminal alpha-beta the C-terminal all beta domain., structural genomics; 2.00A {Nostoc SP}
Probab=29.44 E-value=57 Score=31.19 Aligned_cols=35 Identities=14% Similarity=0.024 Sum_probs=28.0
Q ss_pred ceEEEEeeccccccccCcHHHHH--hHHHHHHHHCCCeEEEEee
Q 011163 9 FHIIHICTEMDPLVSIGSLASYV--TGLSGALQRKGHLVEVILP 50 (492)
Q Consensus 9 mkIl~v~~~~~p~~~~GG~~~~~--~~l~~~L~~~Gh~V~vi~~ 50 (492)
|+|++++. .||+|+.+ ..|+..|+++|.+|.++..
T Consensus 2 ~~i~~~~g-------kGG~GKTt~a~~la~~la~~g~~vllvd~ 38 (374)
T 3igf_A 2 ALILTFLG-------KSGVARTKIAIAAAKLLASQGKRVLLAGL 38 (374)
T ss_dssp CEEEEEEC-------SBHHHHHHHHHHHHHHHHHTTCCEEEEEC
T ss_pred cEEEEEeC-------CCCCcHHHHHHHHHHHHHHCCCCeEEEeC
Confidence 67877664 48888765 6688889999999999976
No 326
>2ejb_A Probable aromatic acid decarboxylase; phenylacrylic acid decarboxylase, X-RAY diffraction, structural genomics, NPPSFA; 2.15A {Aquifex aeolicus}
Probab=29.22 E-value=81 Score=26.78 Aligned_cols=34 Identities=21% Similarity=0.287 Sum_probs=26.0
Q ss_pred eEEEEeeccccccccCcHH-HHHhHHHHHHHHCCCeEEEEeec
Q 011163 10 HIIHICTEMDPLVSIGSLA-SYVTGLSGALQRKGHLVEVILPK 51 (492)
Q Consensus 10 kIl~v~~~~~p~~~~GG~~-~~~~~l~~~L~~~Gh~V~vi~~~ 51 (492)
||++..+ |+.+ .+..++.+.|.+.|++|.++...
T Consensus 3 ~IllgvT--------Gs~aa~k~~~l~~~L~~~g~~V~vv~T~ 37 (189)
T 2ejb_A 3 KIALCIT--------GASGVIYGIKLLQVLEELDFSVDLVISR 37 (189)
T ss_dssp EEEEEEC--------SSTTHHHHHHHHHHHHHTTCEEEEEECH
T ss_pred EEEEEEE--------CHHHHHHHHHHHHHHHHCCCEEEEEECh
Confidence 7777664 4433 46789999999999999999753
No 327
>4e3z_A Putative oxidoreductase protein; PSI-biology, structural genomics, protein structure initiati nysgrc,oxidoreductase; 2.00A {Rhizobium etli}
Probab=29.14 E-value=45 Score=29.87 Aligned_cols=34 Identities=12% Similarity=0.165 Sum_probs=24.9
Q ss_pred CceEEEEeeccccccccCcHHHHHhHHHHHHHHCCCeEEEEee
Q 011163 8 GFHIIHICTEMDPLVSIGSLASYVTGLSGALQRKGHLVEVILP 50 (492)
Q Consensus 8 ~mkIl~v~~~~~p~~~~GG~~~~~~~l~~~L~~~Gh~V~vi~~ 50 (492)
.+|+++||- ..||+| ..+++.|.++|++|.++..
T Consensus 25 ~~k~vlITG------as~gIG---~a~a~~l~~~G~~V~~~~~ 58 (272)
T 4e3z_A 25 DTPVVLVTG------GSRGIG---AAVCRLAARQGWRVGVNYA 58 (272)
T ss_dssp CSCEEEETT------TTSHHH---HHHHHHHHHTTCEEEEEES
T ss_pred CCCEEEEEC------CCchHH---HHHHHHHHHCCCEEEEEcC
Confidence 357777774 346776 5788899999999977643
No 328
>2r8r_A Sensor protein; KDPD, PFAM02702, MCSG, structural genomics, protein structure initiative, midwest center for structural genomics, kinase; 2.30A {Pseudomonas syringae PV}
Probab=29.13 E-value=52 Score=28.95 Aligned_cols=27 Identities=15% Similarity=0.008 Sum_probs=20.7
Q ss_pred CcHHHHH--hHHHHHHHHCCCeEEEEeec
Q 011163 25 GSLASYV--TGLSGALQRKGHLVEVILPK 51 (492)
Q Consensus 25 GG~~~~~--~~l~~~L~~~Gh~V~vi~~~ 51 (492)
||+|+.. .+++.++.++|++|.++...
T Consensus 15 gGvGKTt~a~~la~~l~~~G~~V~v~d~D 43 (228)
T 2r8r_A 15 PGVGKTYAMLQAAHAQLRQGVRVMAGVVE 43 (228)
T ss_dssp TTSSHHHHHHHHHHHHHHTTCCEEEEECC
T ss_pred CCCcHHHHHHHHHHHHHHCCCCEEEEEeC
Confidence 6666544 58889999999999877654
No 329
>3fwz_A Inner membrane protein YBAL; TRKA-N domain, E.coli, structural genomics, PSI-2, Pro structure initiative; HET: MSE AMP; 1.79A {Escherichia coli k-12}
Probab=29.12 E-value=35 Score=27.08 Aligned_cols=25 Identities=16% Similarity=-0.019 Sum_probs=20.4
Q ss_pred HHHHHhHHHHHHHHCCCeEEEEeec
Q 011163 27 LASYVTGLSGALQRKGHLVEVILPK 51 (492)
Q Consensus 27 ~~~~~~~l~~~L~~~Gh~V~vi~~~ 51 (492)
.|.+-..+++.|.+.|++|.++..+
T Consensus 15 ~G~~G~~la~~L~~~g~~v~vid~~ 39 (140)
T 3fwz_A 15 YGRVGSLLGEKLLASDIPLVVIETS 39 (140)
T ss_dssp CSHHHHHHHHHHHHTTCCEEEEESC
T ss_pred cCHHHHHHHHHHHHCCCCEEEEECC
Confidence 3556678888999999999999865
No 330
>2fb6_A Conserved hypothetical protein; structural genomics, PSI, protein STRU initiative, midwest center for structural genomics, MCSG; HET: MSE; 1.46A {Bacteroides thetaiotaomicron}
Probab=28.99 E-value=45 Score=25.79 Aligned_cols=39 Identities=10% Similarity=0.076 Sum_probs=29.1
Q ss_pred ceEEEEeeccccccccCcHHHHHhHHHHHHHHCC--CeEEEEeec
Q 011163 9 FHIIHICTEMDPLVSIGSLASYVTGLSGALQRKG--HLVEVILPK 51 (492)
Q Consensus 9 mkIl~v~~~~~p~~~~GG~~~~~~~l~~~L~~~G--h~V~vi~~~ 51 (492)
||+++|.....|. .........|..+.+.| |+|.|+.-.
T Consensus 8 ~K~~ivi~s~d~~----~~~~~al~~A~~a~~~G~~~eV~i~~~G 48 (117)
T 2fb6_A 8 DKLTILWTTDNKD----TVFNMLAMYALNSKNRGWWKHINIILWG 48 (117)
T ss_dssp SEEEEEECCCCHH----HHHHTHHHHHHHHHHHTSCSEEEEEECS
T ss_pred CeEEEEEEcCChH----HHHHHHHHHHHHHHHcCCCCcEEEEEEC
Confidence 8999988753331 12256888999999999 899999843
No 331
>1ys7_A Transcriptional regulatory protein PRRA; response regulator, DNA binding domain, phosphorylation; 1.58A {Mycobacterium tuberculosis} SCOP: a.4.6.1 c.23.1.1 PDB: 1ys6_A
Probab=28.90 E-value=2.6e+02 Score=23.55 Aligned_cols=111 Identities=9% Similarity=-0.109 Sum_probs=63.2
Q ss_pred CcEEEEEecCCChhHHHHHHHHHHHhCCCeEEEEeccCHHHHHHHH--hcCCEEEECCC-CCCCchHHHHHhh---cCCc
Q 011163 336 GIQFVFTGTNKLPSASRALVSFQEELKDGIVIFVDSYDDALLHLIF--SGSDIILCHSF-HDPLLQVPLKALK---YGAA 409 (492)
Q Consensus 336 ~~~lvivG~g~~~~~~~~l~~~~~~~~~~~v~~~~~~~~~~~~~~~--~~adi~v~pS~-~E~~glv~lEAma---~G~P 409 (492)
..+++|+.+ ++...+.++...+..+ -.|.. ..+.++....+ ...|++++--. -+.-|+-+++.+. ..+|
T Consensus 7 ~~~ilivdd--~~~~~~~l~~~L~~~g-~~v~~--~~~~~~a~~~~~~~~~dlvllD~~l~~~~g~~~~~~l~~~~~~~~ 81 (233)
T 1ys7_A 7 SPRVLVVDD--DSDVLASLERGLRLSG-FEVAT--AVDGAEALRSATENRPDAIVLDINMPVLDGVSVVTALRAMDNDVP 81 (233)
T ss_dssp CCEEEEECS--CHHHHHHHHHHHHHTT-CEEEE--ESSHHHHHHHHHHSCCSEEEEESSCSSSCHHHHHHHHHHTTCCCC
T ss_pred CCeEEEEeC--CHHHHHHHHHHHHhCC-CEEEE--ECCHHHHHHHHHhCCCCEEEEeCCCCCCCHHHHHHHHHhcCCCCC
Confidence 357777764 3445556666655542 34432 22333322332 24688776543 3445676666653 4678
Q ss_pred eEEEecCCCcccccccccccccceeeeeecCCCHHHHHHHHHHHh
Q 011163 410 PIAVTSSDIEFRHFAEFDHESTRFSRFISSTFGNISLSQALEEIK 454 (492)
Q Consensus 410 vV~~~~~~gg~~e~v~~~~~~~g~~G~~~~~~~~~~l~~ai~~~~ 454 (492)
+|+... ..-.+.+... ...|..||+..|.+++.|..+|..++
T Consensus 82 ii~lt~--~~~~~~~~~~-~~~ga~~~l~Kp~~~~~L~~~i~~~~ 123 (233)
T 1ys7_A 82 VCVLSA--RSSVDDRVAG-LEAGADDYLVKPFVLAELVARVKALL 123 (233)
T ss_dssp EEEEEC--CCTTTCCCTT-TTTTCSEEEESSCCHHHHHHHHHHHH
T ss_pred EEEEEc--CCCHHHHHHH-HHcCCCEEEeCCCCHHHHHHHHHHHH
Confidence 887654 2222222111 12466789999999999999988875
No 332
>1ihu_A Arsenical pump-driving ATPase; aluminum fluoride, ADP, ARSA ATPase, ATP binding site, hydro; HET: ADP; 2.15A {Escherichia coli} SCOP: c.37.1.10 c.37.1.10 PDB: 1f48_A* 1ii0_A* 1ii9_A*
Probab=28.88 E-value=56 Score=33.33 Aligned_cols=42 Identities=14% Similarity=0.135 Sum_probs=31.7
Q ss_pred ccCCCceEEEEeeccccccccCcHHH--HHhHHHHHHHHCCCeEEEEeecC
Q 011163 4 WLRNGFHIIHICTEMDPLVSIGSLAS--YVTGLSGALQRKGHLVEVILPKY 52 (492)
Q Consensus 4 ~~~~~mkIl~v~~~~~p~~~~GG~~~--~~~~l~~~L~~~Gh~V~vi~~~~ 52 (492)
-..++++|++++. .||+|+ ...+|+.+|+++|.+|.++..+.
T Consensus 3 ~~~~~~~i~~~sg-------kGGvGKTT~a~~lA~~lA~~G~rVLlvd~D~ 46 (589)
T 1ihu_A 3 FLQNIPPYLFFTG-------KGGVGKTSISCATAIRLAEQGKRVLLVSTDP 46 (589)
T ss_dssp GGSSCCSEEEEEC-------STTSSHHHHHHHHHHHHHHTTCCEEEEECCT
T ss_pred CCCCCCEEEEEeC-------CCcCHHHHHHHHHHHHHHHCCCcEEEEECCC
Confidence 3455678887774 277765 56778999999999999998653
No 333
>3k31_A Enoyl-(acyl-carrier-protein) reductase; ssgcid, NIH, niaid, SBRI, UW, decode, eonyl-(acyl-carrier-PR reductase, NAD, oxidoreductase; HET: NAD; 1.80A {Anaplasma phagocytophilum} PDB: 3k2e_A*
Probab=28.80 E-value=84 Score=28.55 Aligned_cols=34 Identities=24% Similarity=0.100 Sum_probs=24.6
Q ss_pred ceEEEEeeccccccccC--cHHHHHhHHHHHHHHCCCeEEEEeec
Q 011163 9 FHIIHICTEMDPLVSIG--SLASYVTGLSGALQRKGHLVEVILPK 51 (492)
Q Consensus 9 mkIl~v~~~~~p~~~~G--G~~~~~~~l~~~L~~~Gh~V~vi~~~ 51 (492)
.|+++||- ..| |+|. .++++|.++|++|.++...
T Consensus 30 ~k~vlVTG------asg~~GIG~---~ia~~la~~G~~V~~~~r~ 65 (296)
T 3k31_A 30 GKKGVIIG------VANDKSLAW---GIAKAVCAQGAEVALTYLS 65 (296)
T ss_dssp TCEEEEEC------CCSTTSHHH---HHHHHHHHTTCEEEEEESS
T ss_pred CCEEEEEe------CCCCCCHHH---HHHHHHHHCCCEEEEEeCC
Confidence 36777774 234 7774 6788999999998877644
No 334
>1e6u_A GDP-fucose synthetase; epimerase/reductase, SDR, RED; HET: NAP; 1.45A {Escherichia coli} SCOP: c.2.1.2 PDB: 1e7q_A* 1bsv_A* 1fxs_A* 1gfs_A 1e7s_A* 1bws_A* 1e7r_A*
Probab=28.79 E-value=30 Score=31.76 Aligned_cols=33 Identities=12% Similarity=0.228 Sum_probs=22.1
Q ss_pred CceEEEEeeccccccccCcHHHHHhHHHHHHHHCCCeEEEEee
Q 011163 8 GFHIIHICTEMDPLVSIGSLASYVTGLSGALQRKGHLVEVILP 50 (492)
Q Consensus 8 ~mkIl~v~~~~~p~~~~GG~~~~~~~l~~~L~~~Gh~V~vi~~ 50 (492)
.|||+++. ..|++| ..+++.|.++||+|.++..
T Consensus 3 ~~~ilVtG-------atG~iG---~~l~~~L~~~g~~v~~~~r 35 (321)
T 1e6u_A 3 KQRVFIAG-------HRGMVG---SAIRRQLEQRGDVELVLRT 35 (321)
T ss_dssp CEEEEEET-------TTSHHH---HHHHHHHTTCTTEEEECCC
T ss_pred CCEEEEEC-------CCcHHH---HHHHHHHHhCCCeEEEEec
Confidence 37776532 235555 5677889999999877653
No 335
>1kgs_A DRRD, DNA binding response regulator D; DNA-binding protein, ALPH-beta sandwich, winged-helix, helix helix, DNA binding protein; HET: DNA MSE; 1.50A {Thermotoga maritima} SCOP: a.4.6.1 c.23.1.1 PDB: 3nnn_A*
Probab=28.74 E-value=2.6e+02 Score=23.43 Aligned_cols=110 Identities=8% Similarity=0.030 Sum_probs=61.9
Q ss_pred cEEEEEecCCChhHHHHHHHHHHHhCCCeEEEEeccCHHHHHHHH--hcCCEEEECCC-CCCCchHHHHHhh---cCCce
Q 011163 337 IQFVFTGTNKLPSASRALVSFQEELKDGIVIFVDSYDDALLHLIF--SGSDIILCHSF-HDPLLQVPLKALK---YGAAP 410 (492)
Q Consensus 337 ~~lvivG~g~~~~~~~~l~~~~~~~~~~~v~~~~~~~~~~~~~~~--~~adi~v~pS~-~E~~glv~lEAma---~G~Pv 410 (492)
.+++|+.+ ++...+.++...+..+ -.|.. ..+.++....+ ...|++++=-. -+.-|+-+++.+. ..+|+
T Consensus 3 ~~ilivdd--~~~~~~~l~~~L~~~g-~~v~~--~~~~~~a~~~~~~~~~dlvllD~~l~~~~g~~~~~~lr~~~~~~~i 77 (225)
T 1kgs_A 3 VRVLVVED--ERDLADLITEALKKEM-FTVDV--CYDGEEGMYMALNEPFDVVILDIMLPVHDGWEILKSMRESGVNTPV 77 (225)
T ss_dssp CEEEEECS--SHHHHHHHHHHHHHTT-CEEEE--ESSHHHHHHHHHHSCCSEEEEESCCSSSCHHHHHHHHHHTTCCCCE
T ss_pred ceEEEEeC--CHHHHHHHHHHHHHCC-CEEEE--ECCHHHHHHHHhcCCCCEEEEeCCCCCCCHHHHHHHHHhcCCCCCE
Confidence 46677763 3445556666655532 34432 22333322322 24688776543 3445666666653 46788
Q ss_pred EEEecCCCcccccccccccccceeeeeecCCCHHHHHHHHHHHh
Q 011163 411 IAVTSSDIEFRHFAEFDHESTRFSRFISSTFGNISLSQALEEIK 454 (492)
Q Consensus 411 V~~~~~~gg~~e~v~~~~~~~g~~G~~~~~~~~~~l~~ai~~~~ 454 (492)
|+... ..-.+.+... ...|..||+..|.+++.|..+|..++
T Consensus 78 i~ls~--~~~~~~~~~~-~~~ga~~~l~Kp~~~~~l~~~i~~~~ 118 (225)
T 1kgs_A 78 LMLTA--LSDVEYRVKG-LNMGADDYLPKPFDLRELIARVRALI 118 (225)
T ss_dssp EEEES--SCHHHHHHHT-CCCCCSEEEESSCCHHHHHHHHHHHH
T ss_pred EEEeC--CCCHHHHHHH-HhCCccEEEeCCCCHHHHHHHHHHHH
Confidence 87654 2222222211 12466789999999999999988765
No 336
>3r5x_A D-alanine--D-alanine ligase; alpha-beta structure, cytosol, structural genomics, for structural genomics of infectious diseases, csgid; HET: MSE ATP; 2.00A {Bacillus anthracis} PDB: 3r23_A*
Probab=28.69 E-value=40 Score=30.86 Aligned_cols=43 Identities=12% Similarity=-0.032 Sum_probs=27.6
Q ss_pred CCceEEEEeeccccccccCcHHHHHhHHHHHHHHCCCeEEEEeec
Q 011163 7 NGFHIIHICTEMDPLVSIGSLASYVTGLSGALQRKGHLVEVILPK 51 (492)
Q Consensus 7 ~~mkIl~v~~~~~p~~~~GG~~~~~~~l~~~L~~~Gh~V~vi~~~ 51 (492)
..|||++++....+.. --.-.....++++|.++||+|..+.+.
T Consensus 2 ~~m~v~vl~gg~s~e~--~vs~~s~~~v~~al~~~g~~v~~i~~~ 44 (307)
T 3r5x_A 2 NAMRIGVIMGGVSSEK--QVSIMTGNEMIANLDKNKYEIVPITLN 44 (307)
T ss_dssp CCEEEEEEECCSHHHH--HHHHHHHHHHHHHSCTTTEEEEEEECS
T ss_pred CCcEEEEEeCCCCcch--HhHHHHHHHHHHHHHHCCCEEEEEccc
Confidence 4699999884211100 001233567888999999999988764
No 337
>4egb_A DTDP-glucose 4,6-dehydratase; rhamnose pathway, center for structural genomics of infectio diseases, csgid, niaid; HET: NAD SUC; 3.00A {Bacillus anthracis}
Probab=28.68 E-value=35 Score=31.76 Aligned_cols=27 Identities=7% Similarity=-0.027 Sum_probs=17.5
Q ss_pred CcHHHHHhHHHHHHHHCCCeEEEEeec
Q 011163 25 GSLASYVTGLSGALQRKGHLVEVILPK 51 (492)
Q Consensus 25 GG~~~~~~~l~~~L~~~Gh~V~vi~~~ 51 (492)
||.|-.=..|++.|.++|+++.|++..
T Consensus 31 GatG~iG~~l~~~L~~~g~~~~v~~~~ 57 (346)
T 4egb_A 31 GGAGFIGSNFVHYMLQSYETYKIINFD 57 (346)
T ss_dssp TTTSHHHHHHHHHHHHHCTTEEEEEEE
T ss_pred CCccHHHHHHHHHHHhhCCCcEEEEEe
Confidence 344444457788899999666666543
No 338
>4dyv_A Short-chain dehydrogenase/reductase SDR; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 1.80A {Xanthobacter autotrophicus}
Probab=28.53 E-value=47 Score=29.89 Aligned_cols=33 Identities=15% Similarity=0.036 Sum_probs=24.6
Q ss_pred ceEEEEeeccccccccCcHHHHHhHHHHHHHHCCCeEEEEee
Q 011163 9 FHIIHICTEMDPLVSIGSLASYVTGLSGALQRKGHLVEVILP 50 (492)
Q Consensus 9 mkIl~v~~~~~p~~~~GG~~~~~~~l~~~L~~~Gh~V~vi~~ 50 (492)
.|+++||- ..||+| ..+++.|.++|++|.++..
T Consensus 28 ~k~~lVTG------as~GIG---~aia~~la~~G~~V~~~~r 60 (272)
T 4dyv_A 28 KKIAIVTG------AGSGVG---RAVAVALAGAGYGVALAGR 60 (272)
T ss_dssp CCEEEETT------TTSHHH---HHHHHHHHHTTCEEEEEES
T ss_pred CCEEEEeC------CCcHHH---HHHHHHHHHCCCEEEEEEC
Confidence 46777774 346776 5788899999999887764
No 339
>1i24_A Sulfolipid biosynthesis protein SQD1; SDR, short-chain dehydrogenase/reductase, rossmann fold, BIO protein; HET: NAD UPG; 1.20A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 1i2c_A* 1i2b_A* 1qrr_A*
Probab=28.47 E-value=43 Score=31.88 Aligned_cols=26 Identities=15% Similarity=-0.041 Sum_probs=20.5
Q ss_pred CcHHHHHhHHHHHHHHCCCeEEEEee
Q 011163 25 GSLASYVTGLSGALQRKGHLVEVILP 50 (492)
Q Consensus 25 GG~~~~~~~l~~~L~~~Gh~V~vi~~ 50 (492)
||.|-.=..+++.|.++||+|.++..
T Consensus 18 G~tGfIG~~l~~~L~~~G~~V~~~~r 43 (404)
T 1i24_A 18 GGDGYCGWATALHLSKKNYEVCIVDN 43 (404)
T ss_dssp TTTSHHHHHHHHHHHHTTCEEEEEEC
T ss_pred CCCcHHHHHHHHHHHhCCCeEEEEEe
Confidence 56666667788999999999998853
No 340
>1db3_A GDP-mannose 4,6-dehydratase; NADP, GDP-fucose, lyase; 2.30A {Escherichia coli} SCOP: c.2.1.2
Probab=28.34 E-value=49 Score=31.04 Aligned_cols=25 Identities=28% Similarity=0.189 Sum_probs=18.5
Q ss_pred cCcHHHHHhHHHHHHHHCCCeEEEEeec
Q 011163 24 IGSLASYVTGLSGALQRKGHLVEVILPK 51 (492)
Q Consensus 24 ~GG~~~~~~~l~~~L~~~Gh~V~vi~~~ 51 (492)
.|++| ..+++.|.++|++|.++...
T Consensus 10 tG~iG---~~l~~~L~~~g~~V~~~~r~ 34 (372)
T 1db3_A 10 TGQDG---SYLAEFLLEKGYEVHGIKRR 34 (372)
T ss_dssp TSHHH---HHHHHHHHHTTCEEEEECC-
T ss_pred CChHH---HHHHHHHHHCCCEEEEEECC
Confidence 35565 56778899999999888754
No 341
>3sxp_A ADP-L-glycero-D-mannoheptose-6-epimerase; rossman fold, NAD binding, isomerase; HET: NAD; 2.55A {Helicobacter pylori}
Probab=28.34 E-value=76 Score=29.67 Aligned_cols=35 Identities=17% Similarity=0.082 Sum_probs=24.1
Q ss_pred CCceEEEEeeccccccccCcHHHHHhHHHHHHHH--CCCeEEEEeec
Q 011163 7 NGFHIIHICTEMDPLVSIGSLASYVTGLSGALQR--KGHLVEVILPK 51 (492)
Q Consensus 7 ~~mkIl~v~~~~~p~~~~GG~~~~~~~l~~~L~~--~Gh~V~vi~~~ 51 (492)
+.|+|++ +- ..|++| ..+++.|.+ .|++|.++...
T Consensus 9 ~~~~vlV-TG------atG~IG---~~l~~~L~~~~~g~~V~~~~r~ 45 (362)
T 3sxp_A 9 ENQTILI-TG------GAGFVG---SNLAFHFQENHPKAKVVVLDKF 45 (362)
T ss_dssp TTCEEEE-ET------TTSHHH---HHHHHHHHHHCTTSEEEEEECC
T ss_pred CCCEEEE-EC------CCCHHH---HHHHHHHHhhCCCCeEEEEECC
Confidence 3466655 41 235665 567788999 99999998754
No 342
>3lcm_A SMU.1420, putative oxidoreductase; NADPH:quinone oxidoreductase, MDAB; HET: FAD NAP; 1.80A {Streptococcus mutans} PDB: 4f8y_A*
Probab=28.25 E-value=51 Score=28.03 Aligned_cols=38 Identities=24% Similarity=0.218 Sum_probs=25.0
Q ss_pred ceEEEEeeccccccccCc-HHHHHhHHHHHHHHCCCeEEEEeec
Q 011163 9 FHIIHICTEMDPLVSIGS-LASYVTGLSGALQRKGHLVEVILPK 51 (492)
Q Consensus 9 mkIl~v~~~~~p~~~~GG-~~~~~~~l~~~L~~~Gh~V~vi~~~ 51 (492)
||||+|.. .|. .++ .......+.+++ +.|++|.++-..
T Consensus 1 MkiLiI~g--spr--~~s~t~~l~~~~~~~~-~~g~~v~~~dL~ 39 (196)
T 3lcm_A 1 MKILIVYT--HPN--PTSFNAEILKQVQTNL-SKEHTVSTLDLY 39 (196)
T ss_dssp CEEEEEEC--CSC--TTSHHHHHHHHHHHHS-CTTSEEEEEETT
T ss_pred CEEEEEEe--CCC--CCChHHHHHHHHHHHh-cCCCeEEEEEcc
Confidence 89999987 453 244 334444455555 679999988754
No 343
>3rft_A Uronate dehydrogenase; apoenzyme, rossmann fold, NAD binding, oxidoreductase; 1.90A {Agrobacterium tumefaciens} PDB: 3rfv_A* 3rfx_A*
Probab=28.08 E-value=31 Score=30.86 Aligned_cols=34 Identities=9% Similarity=0.136 Sum_probs=25.0
Q ss_pred ceEEEEeeccccccccCcHHHHHhHHHHHHHHCCCeEEEEeec
Q 011163 9 FHIIHICTEMDPLVSIGSLASYVTGLSGALQRKGHLVEVILPK 51 (492)
Q Consensus 9 mkIl~v~~~~~p~~~~GG~~~~~~~l~~~L~~~Gh~V~vi~~~ 51 (492)
||.++||- ..||+|. .+++.|.++|++|.++...
T Consensus 3 ~k~vlVTG------asg~IG~---~la~~L~~~G~~V~~~~r~ 36 (267)
T 3rft_A 3 MKRLLVTG------AAGQLGR---VMRERLAPMAEILRLADLS 36 (267)
T ss_dssp EEEEEEES------TTSHHHH---HHHHHTGGGEEEEEEEESS
T ss_pred CCEEEEEC------CCCHHHH---HHHHHHHhcCCEEEEEecC
Confidence 56666664 3577775 5788899999999887754
No 344
>4hs4_A Chromate reductase; triple-layered, A/B/A structure, NAD(P)H-dependent FMN reduc oxidoreductase; HET: FMN; 2.10A {Gluconacetobacter hansenii} PDB: 3s2y_A* 4h6p_A*
Probab=28.06 E-value=35 Score=29.28 Aligned_cols=38 Identities=11% Similarity=0.134 Sum_probs=22.0
Q ss_pred CCceEEEEeeccccccccCcHHHHHhHHHHHHHHCCCeEE-EE
Q 011163 7 NGFHIIHICTEMDPLVSIGSLASYVTGLSGALQRKGHLVE-VI 48 (492)
Q Consensus 7 ~~mkIl~v~~~~~p~~~~GG~~~~~~~l~~~L~~~Gh~V~-vi 48 (492)
.+|||++|+. .| ..+|....+.+.+.+..+.|++|. ++
T Consensus 5 ~~mkIl~I~G--S~--r~~s~t~~la~~~~~~~~~g~~v~~~i 43 (199)
T 4hs4_A 5 SPLHFVTLLG--SL--RKASFNAAVARALPEIAPEGIAITPLG 43 (199)
T ss_dssp CCEEEEEEEC--CC--STTCHHHHHHHHHHHHCCTTEEEEECC
T ss_pred CCCEEEEEEc--CC--CCCChHHHHHHHHHHHccCCCEEEEEE
Confidence 3599999986 33 235554444443333334688887 44
No 345
>1gy8_A UDP-galactose 4-epimerase; oxidoreductase; HET: NAD UDP; 2.0A {Trypanosoma brucei} SCOP: c.2.1.2 PDB: 2cnb_A*
Probab=27.89 E-value=54 Score=31.16 Aligned_cols=34 Identities=15% Similarity=0.200 Sum_probs=23.6
Q ss_pred CceEEEEeeccccccccCcHHHHHhHHHHHHH-HCCCeEEEEeec
Q 011163 8 GFHIIHICTEMDPLVSIGSLASYVTGLSGALQ-RKGHLVEVILPK 51 (492)
Q Consensus 8 ~mkIl~v~~~~~p~~~~GG~~~~~~~l~~~L~-~~Gh~V~vi~~~ 51 (492)
.|+|++.. ..|++| ..+++.|. ++||+|.++...
T Consensus 2 ~m~vlVTG-------atG~iG---~~l~~~L~~~~g~~V~~~~r~ 36 (397)
T 1gy8_A 2 HMRVLVCG-------GAGYIG---SHFVRALLRDTNHSVVIVDSL 36 (397)
T ss_dssp CCEEEEET-------TTSHHH---HHHHHHHHHHCCCEEEEEECC
T ss_pred CCEEEEEC-------CCCHHH---HHHHHHHHHhCCCEEEEEecC
Confidence 47876532 236666 45678888 999999988654
No 346
>1p9l_A Dihydrodipicolinate reductase; oxidoreductase, lysine biosynthesis, NADH binding specificity, TB structural genomics consortium; HET: NAD PDC PG4; 2.30A {Mycobacterium tuberculosis} SCOP: c.2.1.3 d.81.1.3 PDB: 1c3v_A* 1yl5_A 1yl7_A* 1yl6_A*
Probab=27.83 E-value=2.3e+02 Score=25.03 Aligned_cols=80 Identities=11% Similarity=0.058 Sum_probs=41.7
Q ss_pred EEEEEecCCChhHHHHHHHHHHHhCCCeEEEEeccCHHHHHHHHh-cCCEEEECCCCCCCchHHHHHhhcCCceEEEecC
Q 011163 338 QFVFTGTNKLPSASRALVSFQEELKDGIVIFVDSYDDALLHLIFS-GSDIILCHSFHDPLLQVPLKALKYGAAPIAVTSS 416 (492)
Q Consensus 338 ~lvivG~g~~~~~~~~l~~~~~~~~~~~v~~~~~~~~~~~~~~~~-~adi~v~pS~~E~~glv~lEAma~G~PvV~~~~~ 416 (492)
++.|+|..+ ..-..+.+.+...+.-.+........ .+..++. .+|+.|=-|.-+..--.+..+...|+|+|+..+
T Consensus 2 kV~V~Ga~G--~mG~~i~~~~~~~~~~elva~~d~~~-dl~~~~~~~~DvvIDfT~p~a~~~~~~~a~~~g~~~VigTT- 77 (245)
T 1p9l_A 2 RVGVLGAKG--KVGTTMVRAVAAADDLTLSAELDAGD-PLSLLTDGNTEVVIDFTHPDVVMGNLEFLIDNGIHAVVGTT- 77 (245)
T ss_dssp EEEEETTTS--HHHHHHHHHHHHCTTCEEEEEECTTC-CTHHHHHTTCCEEEECSCTTTHHHHHHHHHHTTCEEEECCC-
T ss_pred EEEEECCCC--HHHHHHHHHHHhCCCCEEEEEEccCC-CHHHHhccCCcEEEEccChHHHHHHHHHHHHcCCCEEEcCC-
Confidence 677888422 23344444444332223322211111 1223333 789999555555543344556888999999776
Q ss_pred CCcccc
Q 011163 417 DIEFRH 422 (492)
Q Consensus 417 ~gg~~e 422 (492)
|-..|
T Consensus 78 -G~~~e 82 (245)
T 1p9l_A 78 -GFTAE 82 (245)
T ss_dssp -CCCHH
T ss_pred -CCCHH
Confidence 54444
No 347
>1qyd_A Pinoresinol-lariciresinol reductase; NADPH-dependent aromatic alcohol reductases, pcber, PLR, IFR, lignans, isoflavonoids, plant protein; 2.50A {Thuja plicata} SCOP: c.2.1.2
Probab=27.83 E-value=34 Score=31.30 Aligned_cols=34 Identities=15% Similarity=0.193 Sum_probs=24.1
Q ss_pred CceEEEEeeccccccccCcHHHHHhHHHHHHHHCCCeEEEEeec
Q 011163 8 GFHIIHICTEMDPLVSIGSLASYVTGLSGALQRKGHLVEVILPK 51 (492)
Q Consensus 8 ~mkIl~v~~~~~p~~~~GG~~~~~~~l~~~L~~~Gh~V~vi~~~ 51 (492)
.|+|+++.. +|++|. .++++|.++||+|.+++..
T Consensus 4 ~~~ilVtGa-------tG~iG~---~l~~~L~~~g~~V~~~~R~ 37 (313)
T 1qyd_A 4 KSRVLIVGG-------TGYIGK---RIVNASISLGHPTYVLFRP 37 (313)
T ss_dssp CCCEEEEST-------TSTTHH---HHHHHHHHTTCCEEEECCS
T ss_pred CCEEEEEcC-------CcHHHH---HHHHHHHhCCCcEEEEECC
Confidence 367765432 466665 5677889999999988765
No 348
>1id1_A Putative potassium channel protein; RCK domain, E.coli potassium channel, BK channel, rossmann fold, membrane protein; 2.40A {Escherichia coli} SCOP: c.2.1.9
Probab=27.82 E-value=38 Score=27.28 Aligned_cols=24 Identities=21% Similarity=0.152 Sum_probs=20.2
Q ss_pred HHHHhHHHHHHHHCCCeEEEEeec
Q 011163 28 ASYVTGLSGALQRKGHLVEVILPK 51 (492)
Q Consensus 28 ~~~~~~l~~~L~~~Gh~V~vi~~~ 51 (492)
|.+-..+++.|.+.||+|.++...
T Consensus 12 G~vG~~la~~L~~~g~~V~vid~~ 35 (153)
T 1id1_A 12 SILAINTILQLNQRGQNVTVISNL 35 (153)
T ss_dssp SHHHHHHHHHHHHTTCCEEEEECC
T ss_pred CHHHHHHHHHHHHCCCCEEEEECC
Confidence 555678889999999999999864
No 349
>4egs_A Ribose 5-phosphate isomerase RPIB; tyrosine phosphatase, dephosphorylation, hydrolase; 2.30A {Thermoanaerobacter tengcongensis}
Probab=27.82 E-value=86 Score=26.32 Aligned_cols=42 Identities=17% Similarity=0.215 Sum_probs=22.1
Q ss_pred ccCCCceEEEEeeccccccccCcHHHHHhHHHHHH-HHCCCeEEEEeec
Q 011163 4 WLRNGFHIIHICTEMDPLVSIGSLASYVTGLSGAL-QRKGHLVEVILPK 51 (492)
Q Consensus 4 ~~~~~mkIl~v~~~~~p~~~~GG~~~~~~~l~~~L-~~~Gh~V~vi~~~ 51 (492)
+.+.+|||||||..-. .=..+...+.+.+ .+.|.++.|.+..
T Consensus 30 m~~~~mkVLFVC~GNi------CRSpmAE~l~r~~~~~~g~~~~v~SAG 72 (180)
T 4egs_A 30 MGRGSMRVLFVCTGNT------CRSPMAEGIFNAKSKALGKDWEAKSAG 72 (180)
T ss_dssp ----CCEEEEEESSSS------SHHHHHHHHHHHHHHHTTCCCEEEEEE
T ss_pred CCCCCeEEEEEeCCCc------ccCHHHHHHHHHHHHhcCCceEEEEee
Confidence 4567899999997421 1223333344444 3467777776643
No 350
>1srr_A SPO0F, sporulation response regulatory protein; aspartate pocket, two component system; 1.90A {Bacillus subtilis} SCOP: c.23.1.1 PDB: 1pey_A 3q15_C 2ftk_E* 1fsp_A 1nat_A 1pux_A 2fsp_A 2jvj_A 2jvk_A 2jvi_A 1f51_E
Probab=27.76 E-value=1.8e+02 Score=21.39 Aligned_cols=111 Identities=10% Similarity=-0.044 Sum_probs=60.6
Q ss_pred cEEEEEecCCChhHHHHHHHHHHHhCCCeEEEEeccCHHHHHHHH--hcCCEEEECCC-CCCCchHHHHHhh---cCCce
Q 011163 337 IQFVFTGTNKLPSASRALVSFQEELKDGIVIFVDSYDDALLHLIF--SGSDIILCHSF-HDPLLQVPLKALK---YGAAP 410 (492)
Q Consensus 337 ~~lvivG~g~~~~~~~~l~~~~~~~~~~~v~~~~~~~~~~~~~~~--~~adi~v~pS~-~E~~glv~lEAma---~G~Pv 410 (492)
.+++|+.+ ++...+.++...+..+ -.+.. ..+.++....+ ...|++++=-. .+.-|+-+++.+. ..+|+
T Consensus 4 ~~ilivdd--~~~~~~~l~~~l~~~~-~~v~~--~~~~~~a~~~~~~~~~dlvl~D~~l~~~~g~~~~~~l~~~~~~~~i 78 (124)
T 1srr_A 4 EKILIVDD--QSGIRILLNEVFNKEG-YQTFQ--AANGLQALDIVTKERPDLVLLDMKIPGMDGIEILKRMKVIDENIRV 78 (124)
T ss_dssp CEEEEECS--CHHHHHHHHHHHHTTT-CEEEE--ESSHHHHHHHHHHHCCSEEEEESCCTTCCHHHHHHHHHHHCTTCEE
T ss_pred ceEEEEeC--CHHHHHHHHHHHHHCC-cEEEE--eCCHHHHHHHHhccCCCEEEEecCCCCCCHHHHHHHHHHhCCCCCE
Confidence 46677763 3445555665555432 33332 22333322222 34688776433 2345666666553 46777
Q ss_pred EEEecCCCcccccccccccccceeeeeecCCCHHHHHHHHHHHhc
Q 011163 411 IAVTSSDIEFRHFAEFDHESTRFSRFISSTFGNISLSQALEEIKN 455 (492)
Q Consensus 411 V~~~~~~gg~~e~v~~~~~~~g~~G~~~~~~~~~~l~~ai~~~~~ 455 (492)
|+... ..-.+..... ...|..+++..|.+.+.|.++++.++.
T Consensus 79 i~~s~--~~~~~~~~~~-~~~g~~~~l~KP~~~~~l~~~i~~~~~ 120 (124)
T 1srr_A 79 IIMTA--YGELDMIQES-KELGALTHFAKPFDIDEIRDAVKKYLP 120 (124)
T ss_dssp EEEES--SCCHHHHHHH-HHHTCCCEEESSCCHHHHHHHHHHHSC
T ss_pred EEEEc--cCchHHHHHH-HhcChHhhccCCCCHHHHHHHHHHHhc
Confidence 77543 2222222111 113556899999999999999988764
No 351
>2d1y_A Hypothetical protein TT0321; strucrtural genomics, thermus thermophilus HB8, structural genomics, NPPSFA; HET: NAD; 1.65A {Thermus thermophilus} SCOP: c.2.1.2
Probab=27.75 E-value=73 Score=28.12 Aligned_cols=33 Identities=15% Similarity=0.251 Sum_probs=23.8
Q ss_pred eEEEEeeccccccccCcHHHHHhHHHHHHHHCCCeEEEEeec
Q 011163 10 HIIHICTEMDPLVSIGSLASYVTGLSGALQRKGHLVEVILPK 51 (492)
Q Consensus 10 kIl~v~~~~~p~~~~GG~~~~~~~l~~~L~~~Gh~V~vi~~~ 51 (492)
|.++||- ..||+|. .+++.|.++|++|.++...
T Consensus 7 k~vlVTG------as~gIG~---~ia~~l~~~G~~V~~~~r~ 39 (256)
T 2d1y_A 7 KGVLVTG------GARGIGR---AIAQAFAREGALVALCDLR 39 (256)
T ss_dssp CEEEEET------TTSHHHH---HHHHHHHHTTCEEEEEESS
T ss_pred CEEEEeC------CCCHHHH---HHHHHHHHCCCEEEEEeCC
Confidence 5556663 3577775 5788899999999887654
No 352
>1tmy_A CHEY protein, TMY; chemotaxis, phosphoryl transfer, signal transduction; 1.90A {Thermotoga maritima} SCOP: c.23.1.1 PDB: 2tmy_A 3tmy_A 4tmy_A 1u0s_Y
Probab=27.19 E-value=1.8e+02 Score=21.19 Aligned_cols=111 Identities=11% Similarity=-0.004 Sum_probs=58.2
Q ss_pred cEEEEEecCCChhHHHHHHHHHHHhCCCeEEEEeccCHHHHHHHH--hcCCEEEECCC-CCCCchHHHHHhh---cCCce
Q 011163 337 IQFVFTGTNKLPSASRALVSFQEELKDGIVIFVDSYDDALLHLIF--SGSDIILCHSF-HDPLLQVPLKALK---YGAAP 410 (492)
Q Consensus 337 ~~lvivG~g~~~~~~~~l~~~~~~~~~~~v~~~~~~~~~~~~~~~--~~adi~v~pS~-~E~~glv~lEAma---~G~Pv 410 (492)
.+++|+.+ ++...+.++...+..+ -.+... ..+.++....+ ...|++++=-. .+.-|+..++.+. ..+|+
T Consensus 3 ~~ilivdd--~~~~~~~l~~~l~~~g-~~vv~~-~~~~~~a~~~~~~~~~dlil~D~~l~~~~g~~~~~~l~~~~~~~~i 78 (120)
T 1tmy_A 3 KRVLIVDD--AAFMRMMLKDIITKAG-YEVAGE-ATNGREAVEKYKELKPDIVTMDITMPEMNGIDAIKEIMKIDPNAKI 78 (120)
T ss_dssp CEEEEECS--CHHHHHHHHHHHHHTT-CEEEEE-ESSHHHHHHHHHHHCCSEEEEECSCGGGCHHHHHHHHHHHCTTCCE
T ss_pred ceEEEEcC--cHHHHHHHHHHHhhcC-cEEEEE-ECCHHHHHHHHHhcCCCEEEEeCCCCCCcHHHHHHHHHhhCCCCeE
Confidence 45666663 2344555665555432 232211 22322222222 24687776433 2334666666553 46777
Q ss_pred EEEecCCCcccccccccccccceeeeeecCCCHHHHHHHHHHHh
Q 011163 411 IAVTSSDIEFRHFAEFDHESTRFSRFISSTFGNISLSQALEEIK 454 (492)
Q Consensus 411 V~~~~~~gg~~e~v~~~~~~~g~~G~~~~~~~~~~l~~ai~~~~ 454 (492)
|+... ..-.+..... ...|..+|+..|.+.+.|.++++.++
T Consensus 79 i~~s~--~~~~~~~~~~-~~~g~~~~l~KP~~~~~l~~~i~~~~ 119 (120)
T 1tmy_A 79 IVCSA--MGQQAMVIEA-IKAGAKDFIVKPFQPSRVVEALNKVS 119 (120)
T ss_dssp EEEEC--TTCHHHHHHH-HHTTCCEEEESSCCHHHHHHHHHHHC
T ss_pred EEEeC--CCCHHHHHHH-HHhCcceeEeCCCCHHHHHHHHHHHh
Confidence 76543 2222221110 11456789999999999999888764
No 353
>3tpf_A Otcase, ornithine carbamoyltransferase; structural genomics, center for structural genomics of infec diseases, csgid, rossman fold; 2.70A {Campylobacter jejuni subsp}
Probab=27.10 E-value=3.1e+02 Score=25.19 Aligned_cols=104 Identities=7% Similarity=-0.032 Sum_probs=0.0
Q ss_pred ecCCCCCCCcCCCCCcccccccCccCccChHHHHHHHHHHhCCCC-CCCceEEEEEeccccccCHHHHHHHHHHHhHcCc
Q 011163 259 APCGFDSSTWDPSNDKFLTENYCAEDMKGKTVCKVTLQQQLGLSK-DASTIVVGCIFSDVSDVFLENLKAVVRGAKMRGI 337 (492)
Q Consensus 259 I~nGvd~~~f~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~lg~~~-~~~~~~i~~~grl~~~Kg~~~li~a~~~l~~~~~ 337 (492)
|-||-| +..+|. ..-.+--.+++++|--. + ..+.++|-...- ...++.++..+ +.
T Consensus 116 VINag~-~~~HPt---------------QaLaDl~Ti~e~~g~l~~g---l~va~vGD~~~v--a~Sl~~~~~~~---G~ 171 (307)
T 3tpf_A 116 VINALS-ELYHPT---------------QVLGDLFTIKEWNKMQNGI---AKVAFIGDSNNM--CNSWLITAAIL---GF 171 (307)
T ss_dssp EEEEEC-SSCCHH---------------HHHHHHHHHHHTTCCGGGC---CEEEEESCSSHH--HHHHHHHHHHH---TC
T ss_pred EEeCCC-CCcCcH---------------HHHHHHHHHHHHhCCCCCC---CEEEEEcCCCcc--HHHHHHHHHHc---CC
Q ss_pred EEEEEecC---CChhHHHHHHHHHHHhCCCeEEEEeccCHHHHHHHHhcCCEEEECCC
Q 011163 338 QFVFTGTN---KLPSASRALVSFQEELKDGIVIFVDSYDDALLHLIFSGSDIILCHSF 392 (492)
Q Consensus 338 ~lvivG~g---~~~~~~~~l~~~~~~~~~~~v~~~~~~~~~~~~~~~~~adi~v~pS~ 392 (492)
++.++++. +++...+..++.++..+ ..+... ....+.+..||++....+
T Consensus 172 ~v~~~~P~~~~~~~~~~~~~~~~a~~~g-~~~~~~-----~d~~eav~~aDvvyt~~w 223 (307)
T 3tpf_A 172 EISIAMPKNYKISPEIWEFAMKQALISG-AKISLG-----YDKFEALKDKDVVITDTW 223 (307)
T ss_dssp EEEEECCTTCCCCHHHHHHHHHHHHHHT-CEEEEE-----SCHHHHHTTCSEEEECCS
T ss_pred EEEEECCCccCCCHHHHHHHHHHHHHcC-CeEEEE-----cCHHHHhcCCCEEEecCc
No 354
>2wyu_A Enoyl-[acyl carrier protein] reductase; oxidoreductase, fatty acid biosynthesis, oxidation reduction; 1.50A {Thermus thermophilus} PDB: 1ulu_A 2wyv_A* 2wyw_A* 2yw9_A*
Probab=27.07 E-value=65 Score=28.60 Aligned_cols=33 Identities=15% Similarity=0.143 Sum_probs=23.8
Q ss_pred eEEEEeecccccccc--CcHHHHHhHHHHHHHHCCCeEEEEeec
Q 011163 10 HIIHICTEMDPLVSI--GSLASYVTGLSGALQRKGHLVEVILPK 51 (492)
Q Consensus 10 kIl~v~~~~~p~~~~--GG~~~~~~~l~~~L~~~Gh~V~vi~~~ 51 (492)
|.++||- .. ||+|. .+++.|.++|++|.++...
T Consensus 9 k~vlVTG------as~~~gIG~---~ia~~l~~~G~~V~~~~r~ 43 (261)
T 2wyu_A 9 KKALVMG------VTNQRSLGF---AIAAKLKEAGAEVALSYQA 43 (261)
T ss_dssp CEEEEES------CCSSSSHHH---HHHHHHHHHTCEEEEEESC
T ss_pred CEEEEEC------CCCCCcHHH---HHHHHHHHCCCEEEEEcCC
Confidence 4556664 34 78885 5788899999999887643
No 355
>3u7i_A FMN-dependent NADH-azoreductase 1; structural genomics, the center for structural genomics of I diseases, csgid, oxidoreductase; HET: MSE; 1.75A {Bacillus anthracis}
Probab=26.98 E-value=82 Score=27.42 Aligned_cols=43 Identities=14% Similarity=0.088 Sum_probs=27.2
Q ss_pred CCceEEEEeecccccc-ccCcHH-HHHhHHHHHHHHC--CC-eEEEEeec
Q 011163 7 NGFHIIHICTEMDPLV-SIGSLA-SYVTGLSGALQRK--GH-LVEVILPK 51 (492)
Q Consensus 7 ~~mkIl~v~~~~~p~~-~~GG~~-~~~~~l~~~L~~~--Gh-~V~vi~~~ 51 (492)
..||||+|... |.. ..+|.. .....+.+++.+. |+ +|.++-..
T Consensus 3 ~MmkIL~I~gS--pr~~~~~S~s~~L~~~~~~~l~~~~~~~~ev~~idL~ 50 (223)
T 3u7i_A 3 AMNKTLIINAH--PKVDDTSSVSIKVFKHFLESYKELISNNETIEQINLY 50 (223)
T ss_dssp CCCEEEEEECC--TTTTCTTSHHHHHHHHHHHHHHHHCCSSCEEEEEETT
T ss_pred ccCEEEEEEeC--CCCCCCCChHHHHHHHHHHHHHHhCCCCCeEEEEECc
Confidence 44899999973 420 134544 4455566677665 68 99888754
No 356
>1u7z_A Coenzyme A biosynthesis bifunctional protein coabc; ligase; HET: PMT; 2.30A {Escherichia coli} SCOP: c.72.3.1 PDB: 1u7w_A* 1u7u_A* 1u80_A*
Probab=26.92 E-value=68 Score=28.18 Aligned_cols=25 Identities=20% Similarity=0.348 Sum_probs=20.2
Q ss_pred cCcHHHHHhHHHHHHHHCCCeEEEEeec
Q 011163 24 IGSLASYVTGLSGALQRKGHLVEVILPK 51 (492)
Q Consensus 24 ~GG~~~~~~~l~~~L~~~Gh~V~vi~~~ 51 (492)
+||+| ..+++++.++|.+|+++...
T Consensus 33 Sg~iG---~aiA~~~~~~Ga~V~l~~~~ 57 (226)
T 1u7z_A 33 SGKMG---FAIAAAAARRGANVTLVSGP 57 (226)
T ss_dssp CSHHH---HHHHHHHHHTTCEEEEEECS
T ss_pred ccHHH---HHHHHHHHHCCCEEEEEECC
Confidence 47777 67889999999999998643
No 357
>1zh2_A KDP operon transcriptional regulatory protein KDPE; two-component system, gene regulation, transcription factor, KDP potassium transport system; 2.00A {Escherichia coli} SCOP: c.23.1.1 PDB: 1zh4_A
Probab=26.86 E-value=1.8e+02 Score=21.12 Aligned_cols=109 Identities=14% Similarity=-0.028 Sum_probs=55.9
Q ss_pred EEEEEecCCChhHHHHHHHHHHHhCCCeEEEEeccCHHH-HHHH-HhcCCEEEECCC-CCCCchHHHHHhh--cCCceEE
Q 011163 338 QFVFTGTNKLPSASRALVSFQEELKDGIVIFVDSYDDAL-LHLI-FSGSDIILCHSF-HDPLLQVPLKALK--YGAAPIA 412 (492)
Q Consensus 338 ~lvivG~g~~~~~~~~l~~~~~~~~~~~v~~~~~~~~~~-~~~~-~~~adi~v~pS~-~E~~glv~lEAma--~G~PvV~ 412 (492)
+++|+.+ ++...+.++...+..+ -.+.. ..+..+ +..+ -...|++++=.. .+..|+-+++.+. ..+|+|+
T Consensus 3 ~ilivdd--~~~~~~~l~~~l~~~~-~~v~~--~~~~~~~~~~~~~~~~dlvi~D~~l~~~~g~~~~~~l~~~~~~~ii~ 77 (121)
T 1zh2_A 3 NVLIVED--EQAIRRFLRTALEGDG-MRVFE--AETLQRGLLEAATRKPDLIILDLGLPDGDGIEFIRDLRQWSAVPVIV 77 (121)
T ss_dssp EEEEECS--CHHHHHHHHHHHHTTT-CEEEE--ESSHHHHHHHHHHHCCSEEEEESEETTEEHHHHHHHHHTTCCCCEEE
T ss_pred EEEEEeC--CHHHHHHHHHHHhcCC-CEEEE--eCCHHHHHHHHhcCCCCEEEEeCCCCCCcHHHHHHHHHhCCCCcEEE
Confidence 4566653 2344555555555432 23332 222222 2111 234687776432 2334666666654 3567766
Q ss_pred EecCCCcccccccccccccceeeeeecCCCHHHHHHHHHHHh
Q 011163 413 VTSSDIEFRHFAEFDHESTRFSRFISSTFGNISLSQALEEIK 454 (492)
Q Consensus 413 ~~~~~gg~~e~v~~~~~~~g~~G~~~~~~~~~~l~~ai~~~~ 454 (492)
... ..-.+..... ...|..+|+..|.+.+.|..+++.++
T Consensus 78 ~s~--~~~~~~~~~~-~~~g~~~~l~Kp~~~~~l~~~i~~~~ 116 (121)
T 1zh2_A 78 LSA--RSEESDKIAA-LDAGADDYLSKPFGIGELQARLRVAL 116 (121)
T ss_dssp EES--CCSHHHHHHH-HHHTCSEEEESSCCHHHHHHHHHHHH
T ss_pred EEC--CCCHHHHHHH-HhcCCCeEEeCCcCHHHHHHHHHHHH
Confidence 543 2222221110 11355689999999999999888765
No 358
>1dhr_A Dihydropteridine reductase; oxidoreductase(acting on NADH or NADPH); HET: NAD; 2.30A {Rattus norvegicus} SCOP: c.2.1.2 PDB: 1dir_A* 1hdr_A*
Probab=26.82 E-value=70 Score=27.93 Aligned_cols=34 Identities=15% Similarity=0.116 Sum_probs=24.4
Q ss_pred ceEEEEeeccccccccCcHHHHHhHHHHHHHHCCCeEEEEeec
Q 011163 9 FHIIHICTEMDPLVSIGSLASYVTGLSGALQRKGHLVEVILPK 51 (492)
Q Consensus 9 mkIl~v~~~~~p~~~~GG~~~~~~~l~~~L~~~Gh~V~vi~~~ 51 (492)
+|.++|+- ..||+| ..+++.|.++|++|.++...
T Consensus 7 ~k~vlVTG------as~gIG---~~ia~~l~~~G~~V~~~~r~ 40 (241)
T 1dhr_A 7 ARRVLVYG------GRGALG---SRCVQAFRARNWWVASIDVV 40 (241)
T ss_dssp CCEEEEET------TTSHHH---HHHHHHHHTTTCEEEEEESS
T ss_pred CCEEEEEC------CCcHHH---HHHHHHHHhCCCEEEEEeCC
Confidence 35556663 347777 46788899999999887654
No 359
>2ph3_A 3-oxoacyl-[acyl carrier protein] reductase; TTHA0415, structural genomics, southea collaboratory for structural genomics, secsg; 1.91A {Thermus thermophilus HB8}
Probab=26.67 E-value=45 Score=29.09 Aligned_cols=32 Identities=9% Similarity=0.145 Sum_probs=22.3
Q ss_pred ceEEEEeeccccccccCcHHHHHhHHHHHHHHCCCeEEEEe
Q 011163 9 FHIIHICTEMDPLVSIGSLASYVTGLSGALQRKGHLVEVIL 49 (492)
Q Consensus 9 mkIl~v~~~~~p~~~~GG~~~~~~~l~~~L~~~Gh~V~vi~ 49 (492)
||.++|+- ..||+| ..+++.|.++|++|.++.
T Consensus 1 ~k~vlITG------asggiG---~~~a~~l~~~G~~v~~~~ 32 (245)
T 2ph3_A 1 MRKALITG------ASRGIG---RAIALRLAEDGFALAIHY 32 (245)
T ss_dssp CCEEEETT------TTSHHH---HHHHHHHHTTTCEEEEEE
T ss_pred CCEEEEeC------CCchHH---HHHHHHHHHCCCEEEEEc
Confidence 44455553 346666 467888999999998873
No 360
>3s40_A Diacylglycerol kinase; structural genomics, the center for structural genomics of infectious diseases, csgid, transfer; 2.10A {Bacillus anthracis} PDB: 3t5p_A
Probab=26.54 E-value=1e+02 Score=28.29 Aligned_cols=43 Identities=16% Similarity=0.136 Sum_probs=30.3
Q ss_pred CceEEEEeeccccccccCcHHHHHhHHHHHHHHCCCeEEEEeecCC
Q 011163 8 GFHIIHICTEMDPLVSIGSLASYVTGLSGALQRKGHLVEVILPKYA 53 (492)
Q Consensus 8 ~mkIl~v~~~~~p~~~~GG~~~~~~~l~~~L~~~Gh~V~vi~~~~~ 53 (492)
.||+++|.. |....|-......++...|.+.|+++.++...++
T Consensus 8 m~~~~vi~N---p~sG~~~~~~~~~~i~~~l~~~~~~~~~~~t~~~ 50 (304)
T 3s40_A 8 FEKVLLIVN---PKAGQGDLHTNLTKIVPPLAAAFPDLHILHTKEQ 50 (304)
T ss_dssp CSSEEEEEC---TTCSSSCHHHHHHHHHHHHHHHCSEEEEEECCST
T ss_pred CCEEEEEEC---cccCCCchHHHHHHHHHHHHHcCCeEEEEEccCc
Confidence 457877775 4333333556678888899999999999876544
No 361
>3snk_A Response regulator CHEY-like protein; P-loop containing nucleoside triphosphate hydrolases, struct genomics; 2.02A {Mesorhizobium loti}
Probab=26.48 E-value=81 Score=24.12 Aligned_cols=112 Identities=14% Similarity=-0.006 Sum_probs=55.8
Q ss_pred cEEEEEecCCChhHHHHHHHHHHHhCCCeEEEEeccCHHHHHHHH--hcCCEEEECCC-CCCCchHHHHHh---hcCCce
Q 011163 337 IQFVFTGTNKLPSASRALVSFQEELKDGIVIFVDSYDDALLHLIF--SGSDIILCHSF-HDPLLQVPLKAL---KYGAAP 410 (492)
Q Consensus 337 ~~lvivG~g~~~~~~~~l~~~~~~~~~~~v~~~~~~~~~~~~~~~--~~adi~v~pS~-~E~~glv~lEAm---a~G~Pv 410 (492)
.+++|+.+ ++...+.++...+..+.-.|... .+.++....+ ...|++++=.. -+.-|+-+++.+ ...+|+
T Consensus 15 ~~ilivdd--~~~~~~~l~~~L~~~g~~~v~~~--~~~~~a~~~l~~~~~dlvi~D~~l~~~~g~~~~~~l~~~~~~~~i 90 (135)
T 3snk_A 15 KQVALFSS--DPNFKRDVATRLDALAIYDVRVS--ETDDFLKGPPADTRPGIVILDLGGGDLLGKPGIVEARALWATVPL 90 (135)
T ss_dssp EEEEEECS--CHHHHHHHHHHHHHTSSEEEEEE--CGGGGGGCCCTTCCCSEEEEEEETTGGGGSTTHHHHHGGGTTCCE
T ss_pred cEEEEEcC--CHHHHHHHHHHHhhcCCeEEEEe--ccHHHHHHHHhccCCCEEEEeCCCCCchHHHHHHHHHhhCCCCcE
Confidence 46666653 23445555555555310122221 1211111111 23566665432 233344444443 336788
Q ss_pred EEEecCCCcccccccccccccceeeeeecCCCHHHHHHHHHHHhc
Q 011163 411 IAVTSSDIEFRHFAEFDHESTRFSRFISSTFGNISLSQALEEIKN 455 (492)
Q Consensus 411 V~~~~~~gg~~e~v~~~~~~~g~~G~~~~~~~~~~l~~ai~~~~~ 455 (492)
|+... ..-.+..... ...|..+|+..|.+++.|..+|..++.
T Consensus 91 i~~s~--~~~~~~~~~~-~~~g~~~~l~KP~~~~~L~~~i~~~~~ 132 (135)
T 3snk_A 91 IAVSD--ELTSEQTRVL-VRMNASDWLHKPLDGKELLNAVTFHDT 132 (135)
T ss_dssp EEEES--CCCHHHHHHH-HHTTCSEEEESSCCHHHHHHHHHHTC-
T ss_pred EEEeC--CCCHHHHHHH-HHcCcHhhccCCCCHHHHHHHHHHHhc
Confidence 77654 2222222110 114567899999999999999998864
No 362
>3hwr_A 2-dehydropantoate 2-reductase; YP_299159.1, PANE/APBA family ketopantoate reductase, struct genomics, joint center for structural genomics; HET: NDP BCN; 2.15A {Ralstonia eutropha}
Probab=26.48 E-value=54 Score=30.38 Aligned_cols=32 Identities=28% Similarity=0.462 Sum_probs=22.5
Q ss_pred CCCceEEEEeeccccccccCcHHHHHhHHHHHHHHCCCeEEEE
Q 011163 6 RNGFHIIHICTEMDPLVSIGSLASYVTGLSGALQRKGHLVEVI 48 (492)
Q Consensus 6 ~~~mkIl~v~~~~~p~~~~GG~~~~~~~l~~~L~~~Gh~V~vi 48 (492)
.+.|||++|.. |.+|. .++..|.+.||+|+++
T Consensus 17 ~~~~kI~IiGa--------Ga~G~---~~a~~L~~~G~~V~l~ 48 (318)
T 3hwr_A 17 FQGMKVAIMGA--------GAVGC---YYGGMLARAGHEVILI 48 (318)
T ss_dssp ---CEEEEESC--------SHHHH---HHHHHHHHTTCEEEEE
T ss_pred ccCCcEEEECc--------CHHHH---HHHHHHHHCCCeEEEE
Confidence 35688988764 66664 4567788999999998
No 363
>1g63_A Epidermin modifying enzyme EPID; alpha, beta protein, rossmann like fold, oxidoreductase; HET: FMN; 2.50A {Staphylococcus epidermidis} SCOP: c.34.1.1 PDB: 1g5q_A*
Probab=26.46 E-value=49 Score=27.95 Aligned_cols=35 Identities=11% Similarity=0.115 Sum_probs=25.8
Q ss_pred ceEEEEeeccccccccCcHH-HHHhHHHHHHHHCCCeEEEEeec
Q 011163 9 FHIIHICTEMDPLVSIGSLA-SYVTGLSGALQRKGHLVEVILPK 51 (492)
Q Consensus 9 mkIl~v~~~~~p~~~~GG~~-~~~~~l~~~L~~~Gh~V~vi~~~ 51 (492)
.||++..+ ||.+ ....++.+.|.+.|++|.|+...
T Consensus 3 k~IllgvT--------Gs~aa~k~~~l~~~L~~~g~~V~vv~T~ 38 (181)
T 1g63_A 3 GKLLICAT--------ASINVININHYIVELKQHFDEVNILFSP 38 (181)
T ss_dssp CCEEEEEC--------SCGGGGGHHHHHHHHTTTSSCEEEEECG
T ss_pred CEEEEEEE--------CHHHHHHHHHHHHHHHHCCCEEEEEEch
Confidence 36777665 3333 25678999999999999999754
No 364
>2a4k_A 3-oxoacyl-[acyl carrier protein] reductase; reductase,hyperthermophIle, structural genomics, PSI, protei structure initiative; 2.30A {Thermus thermophilus} SCOP: c.2.1.2
Probab=26.46 E-value=74 Score=28.34 Aligned_cols=33 Identities=9% Similarity=0.151 Sum_probs=23.9
Q ss_pred eEEEEeeccccccccCcHHHHHhHHHHHHHHCCCeEEEEeec
Q 011163 10 HIIHICTEMDPLVSIGSLASYVTGLSGALQRKGHLVEVILPK 51 (492)
Q Consensus 10 kIl~v~~~~~p~~~~GG~~~~~~~l~~~L~~~Gh~V~vi~~~ 51 (492)
|+++||- ..||+|. .+++.|.++|++|.++...
T Consensus 7 k~vlITG------as~gIG~---aia~~l~~~G~~V~~~~r~ 39 (263)
T 2a4k_A 7 KTILVTG------AASGIGR---AALDLFAREGASLVAVDRE 39 (263)
T ss_dssp CEEEEES------TTSHHHH---HHHHHHHHTTCEEEEEESC
T ss_pred CEEEEEC------CCCHHHH---HHHHHHHHCCCEEEEEeCC
Confidence 5556664 3577774 5788899999999887643
No 365
>4had_A Probable oxidoreductase protein; structural genomics, protein structure initiative, nysgrc, PSI-biology; 2.00A {Rhizobium etli}
Probab=26.41 E-value=97 Score=28.86 Aligned_cols=88 Identities=10% Similarity=0.048 Sum_probs=52.3
Q ss_pred eEEEEEe--ccccccCHHHHHHHHHHHhHcCcEEEEEecCCChhHHHHHHHHHHHhCCCeEEEEeccCHHHHHHHHh--c
Q 011163 308 IVVGCIF--SDVSDVFLENLKAVVRGAKMRGIQFVFTGTNKLPSASRALVSFQEELKDGIVIFVDSYDDALLHLIFS--G 383 (492)
Q Consensus 308 ~~i~~~g--rl~~~Kg~~~li~a~~~l~~~~~~lvivG~g~~~~~~~~l~~~~~~~~~~~v~~~~~~~~~~~~~~~~--~ 383 (492)
..++.+| ++... ..+.+++.. .+++++-+.+. + .+..++++++++..++ +. +.+ ++++ .
T Consensus 24 irigiIG~G~ig~~----~~~~~~~~~--~~~~lvav~d~-~---~~~a~~~a~~~g~~~~--y~--d~~---ell~~~~ 86 (350)
T 4had_A 24 LRFGIISTAKIGRD----NVVPAIQDA--ENCVVTAIASR-D---LTRAREMADRFSVPHA--FG--SYE---EMLASDV 86 (350)
T ss_dssp EEEEEESCCHHHHH----THHHHHHHC--SSEEEEEEECS-S---HHHHHHHHHHHTCSEE--ES--SHH---HHHHCSS
T ss_pred cEEEEEcChHHHHH----HHHHHHHhC--CCeEEEEEECC-C---HHHHHHHHHHcCCCee--eC--CHH---HHhcCCC
Confidence 4555555 33322 345565544 36788766643 2 3556778888752232 11 222 3443 4
Q ss_pred CCEEEECCCCCCCchHHHHHhhcCCceEE
Q 011163 384 SDIILCHSFHDPLLQVPLKALKYGAAPIA 412 (492)
Q Consensus 384 adi~v~pS~~E~~glv~lEAma~G~PvV~ 412 (492)
.|+++.++....-.-..++|+..|++|++
T Consensus 87 iDaV~I~tP~~~H~~~~~~al~aGkhVl~ 115 (350)
T 4had_A 87 IDAVYIPLPTSQHIEWSIKAADAGKHVVC 115 (350)
T ss_dssp CSEEEECSCGGGHHHHHHHHHHTTCEEEE
T ss_pred CCEEEEeCCCchhHHHHHHHHhcCCEEEE
Confidence 79999888654444557889999998776
No 366
>2r25_B Osmosensing histidine protein kinase SLN1; alpha5-BETA5, response regulator, four helix bundle, histidine phosphotransfer (HPT) protein; 1.70A {Saccharomyces cerevisiae} SCOP: c.23.1.1 PDB: 1oxk_B 1oxb_B
Probab=26.23 E-value=2.1e+02 Score=21.57 Aligned_cols=112 Identities=9% Similarity=0.002 Sum_probs=61.2
Q ss_pred cEEEEEecCCChhHHHHHHHHHHHhCCCeEEEEeccCHHHHHHHHh-------cCCEEEECCC-CCCCchHHHHHhhc--
Q 011163 337 IQFVFTGTNKLPSASRALVSFQEELKDGIVIFVDSYDDALLHLIFS-------GSDIILCHSF-HDPLLQVPLKALKY-- 406 (492)
Q Consensus 337 ~~lvivG~g~~~~~~~~l~~~~~~~~~~~v~~~~~~~~~~~~~~~~-------~adi~v~pS~-~E~~glv~lEAma~-- 406 (492)
.+++|+.+ ++...+.++...+..+...+.. ..+.++.-..+. ..|++++=-. -+.-|+-+++.+..
T Consensus 3 ~~ILivdD--~~~~~~~l~~~L~~~g~~~v~~--~~~~~~al~~~~~~~~~~~~~dlvllD~~mp~~~G~~~~~~lr~~~ 78 (133)
T 2r25_B 3 VKILVVED--NHVNQEVIKRMLNLEGIENIEL--ACDGQEAFDKVKELTSKGENYNMIFMDVQMPKVDGLLSTKMIRRDL 78 (133)
T ss_dssp SCEEEECS--CHHHHHHHHHHHHHTTCCCEEE--ESSHHHHHHHHHHHHHHTCCCSEEEECSCCSSSCHHHHHHHHHHHS
T ss_pred ceEEEEcC--CHHHHHHHHHHHHHcCCceEEE--ECCHHHHHHHHHHHHhcCCCCCEEEEeCCCCCCChHHHHHHHHhhc
Confidence 45666663 3445556666655532123332 223333223332 3588877543 23457767666642
Q ss_pred --CCceEEEecCCCcccccccccccccceeeeeecCCCHHHHHHHHHHHhc
Q 011163 407 --GAAPIAVTSSDIEFRHFAEFDHESTRFSRFISSTFGNISLSQALEEIKN 455 (492)
Q Consensus 407 --G~PvV~~~~~~gg~~e~v~~~~~~~g~~G~~~~~~~~~~l~~ai~~~~~ 455 (492)
.+|+|+... .+-.+.+... ...|..||+..|.+.+.|.++|..++.
T Consensus 79 ~~~~~ii~lt~--~~~~~~~~~~-~~~ga~~~l~KP~~~~~L~~~l~~~~~ 126 (133)
T 2r25_B 79 GYTSPIVALTA--FADDSNIKEC-LESGMNGFLSKPIKRPKLKTILTEFCA 126 (133)
T ss_dssp CCCSCEEEEES--CCSHHHHHHH-HHTTCSEEEESSCCHHHHHHHHHHHCT
T ss_pred CCCCCEEEEEC--CCCHHHHHHH-HHcCCCEEEeCCCCHHHHHHHHHHHHH
Confidence 467776543 2222222111 114667899999999999999988764
No 367
>1wma_A Carbonyl reductase [NADPH] 1; oxidoreductase; HET: AB3 NDP PE5 P33; 1.24A {Homo sapiens} SCOP: c.2.1.2 PDB: 3bhi_A* 3bhj_A* 3bhm_A* 2pfg_A* 1n5d_A* 2hrb_A*
Probab=26.19 E-value=59 Score=28.81 Aligned_cols=34 Identities=12% Similarity=0.072 Sum_probs=24.2
Q ss_pred ceEEEEeeccccccccCcHHHHHhHHHHHHHH-CCCeEEEEeec
Q 011163 9 FHIIHICTEMDPLVSIGSLASYVTGLSGALQR-KGHLVEVILPK 51 (492)
Q Consensus 9 mkIl~v~~~~~p~~~~GG~~~~~~~l~~~L~~-~Gh~V~vi~~~ 51 (492)
+|.++|+- ..||+|. .+++.|.+ +|++|.++...
T Consensus 4 ~k~vlITG------asggIG~---~~a~~L~~~~g~~V~~~~r~ 38 (276)
T 1wma_A 4 IHVALVTG------GNKGIGL---AIVRDLCRLFSGDVVLTARD 38 (276)
T ss_dssp CCEEEESS------CSSHHHH---HHHHHHHHHSSSEEEEEESS
T ss_pred CCEEEEeC------CCcHHHH---HHHHHHHHhcCCeEEEEeCC
Confidence 45556663 3467764 67888999 99999887643
No 368
>2pd6_A Estradiol 17-beta-dehydrogenase 8; short-chain dehydrogenase/reductase, steroid metabolism, LIP metabolism, structural genomics; HET: NAD; 2.00A {Homo sapiens}
Probab=26.13 E-value=82 Score=27.74 Aligned_cols=33 Identities=12% Similarity=0.073 Sum_probs=23.6
Q ss_pred eEEEEeeccccccccCcHHHHHhHHHHHHHHCCCeEEEEeec
Q 011163 10 HIIHICTEMDPLVSIGSLASYVTGLSGALQRKGHLVEVILPK 51 (492)
Q Consensus 10 kIl~v~~~~~p~~~~GG~~~~~~~l~~~L~~~Gh~V~vi~~~ 51 (492)
|.++||- ..||+| ..+++.|.++|++|.++...
T Consensus 8 k~vlITG------asggiG---~~la~~l~~~G~~V~~~~r~ 40 (264)
T 2pd6_A 8 ALALVTG------AGSGIG---RAVSVRLAGEGATVAACDLD 40 (264)
T ss_dssp CEEEEET------TTSHHH---HHHHHHHHHTTCEEEEEESS
T ss_pred CEEEEEC------CCChHH---HHHHHHHHHCCCEEEEEeCC
Confidence 4556663 346776 56788999999999887643
No 369
>1p2f_A Response regulator; DRRB, OMPR/PHOB, transcription; HET: MSE; 1.80A {Thermotoga maritima} SCOP: a.4.6.1 c.23.1.1 PDB: 3nns_A*
Probab=26.07 E-value=2.5e+02 Score=23.54 Aligned_cols=108 Identities=8% Similarity=-0.042 Sum_probs=60.4
Q ss_pred EEEEEecCCChhHHHHHHHHHHHhCCCeEEEEeccCHHHHHHHHhcCCEEEECCC-CCCCchHHHHHhh---cCCceEEE
Q 011163 338 QFVFTGTNKLPSASRALVSFQEELKDGIVIFVDSYDDALLHLIFSGSDIILCHSF-HDPLLQVPLKALK---YGAAPIAV 413 (492)
Q Consensus 338 ~lvivG~g~~~~~~~~l~~~~~~~~~~~v~~~~~~~~~~~~~~~~~adi~v~pS~-~E~~glv~lEAma---~G~PvV~~ 413 (492)
+++|+.+ ++...+.++...+.. +.|. ...+.++....+...|++++=-. -+.-|+-+++.+. ..+|+|+.
T Consensus 4 ~ilivdd--~~~~~~~l~~~L~~~--~~v~--~~~~~~~al~~~~~~dlvllD~~lp~~~g~~~~~~lr~~~~~~~ii~l 77 (220)
T 1p2f_A 4 KIAVVDD--DKNILKKVSEKLQQL--GRVK--TFLTGEDFLNDEEAFHVVVLDVMLPDYSGYEICRMIKETRPETWVILL 77 (220)
T ss_dssp EEEEECS--CHHHHHHHHHHHTTT--EEEE--EESSHHHHHHCCSCCSEEEEESBCSSSBHHHHHHHHHHHCTTSEEEEE
T ss_pred eEEEEeC--CHHHHHHHHHHHHhC--CCEE--EECCHHHHHHhcCCCCEEEEeCCCCCCCHHHHHHHHHhcCCCCcEEEE
Confidence 5667663 334455555554443 2332 22233333233356788876433 3445666666654 46788776
Q ss_pred ecCCCcccccccccccccceeeeeecCCCHHHHHHHHHHHh
Q 011163 414 TSSDIEFRHFAEFDHESTRFSRFISSTFGNISLSQALEEIK 454 (492)
Q Consensus 414 ~~~~gg~~e~v~~~~~~~g~~G~~~~~~~~~~l~~ai~~~~ 454 (492)
.. ..-.+.+... ...|..||+..|.+.+.|.++|..++
T Consensus 78 t~--~~~~~~~~~~-~~~ga~~~l~Kp~~~~~L~~~i~~~~ 115 (220)
T 1p2f_A 78 TL--LSDDESVLKG-FEAGADDYVTKPFNPEILLARVKRFL 115 (220)
T ss_dssp ES--CCSHHHHHHH-HHHTCSEEEESSCCHHHHHHHHHHHH
T ss_pred Ec--CCCHHHHHHH-HHcCCCEEEECCCCHHHHHHHHHHHH
Confidence 54 2222222111 11356789999999999999998875
No 370
>2a9o_A Response regulator; essential protein, YYCF/YYCG homolog, signaling protein; 1.65A {Streptococcus pneumoniae} SCOP: c.23.1.1 PDB: 1nxo_A 1nxs_A 1nxv_A 1nxw_A 1nxx_A 1nxp_A 2a9p_A 2a9q_A 1nxt_A* 2a9r_A*
Probab=25.95 E-value=1.9e+02 Score=20.98 Aligned_cols=110 Identities=9% Similarity=0.055 Sum_probs=59.0
Q ss_pred EEEEEecCCChhHHHHHHHHHHHhCCCeEEEEeccCHHHHHHHH--hcCCEEEECCC-CCCCchHHHHHhh--cCCceEE
Q 011163 338 QFVFTGTNKLPSASRALVSFQEELKDGIVIFVDSYDDALLHLIF--SGSDIILCHSF-HDPLLQVPLKALK--YGAAPIA 412 (492)
Q Consensus 338 ~lvivG~g~~~~~~~~l~~~~~~~~~~~v~~~~~~~~~~~~~~~--~~adi~v~pS~-~E~~glv~lEAma--~G~PvV~ 412 (492)
+++|+.+ ++...+.++...+..+ -.+.. ..+.++....+ ...|++++=-. -+..|+.+++.+. ..+|+|+
T Consensus 3 ~ilivdd--~~~~~~~l~~~l~~~~-~~v~~--~~~~~~a~~~~~~~~~dlvl~D~~l~~~~g~~~~~~l~~~~~~~ii~ 77 (120)
T 2a9o_A 3 KILIVDD--EKPISDIIKFNMTKEG-YEVVT--AFNGREALEQFEAEQPDIIILDLMLPEIDGLEVAKTIRKTSSVPILM 77 (120)
T ss_dssp EEEEECS--CHHHHHHHHHHHHHTT-CEEEE--ESSHHHHHHHHHHHCCSEEEECSSCSSSCHHHHHHHHHHHCCCCEEE
T ss_pred eEEEEcC--CHHHHHHHHHHHHhcC-cEEEE--ecCHHHHHHHHHhCCCCEEEEeccCCCCCHHHHHHHHHhCCCCCEEE
Confidence 4566653 2344555555555432 34432 22333222222 34688776543 2345666665553 4677777
Q ss_pred EecCCCcccccccccccccceeeeeecCCCHHHHHHHHHHHhc
Q 011163 413 VTSSDIEFRHFAEFDHESTRFSRFISSTFGNISLSQALEEIKN 455 (492)
Q Consensus 413 ~~~~~gg~~e~v~~~~~~~g~~G~~~~~~~~~~l~~ai~~~~~ 455 (492)
... ..-.+..... ...|..+++..|.+.+.|.+++..++.
T Consensus 78 ~s~--~~~~~~~~~~-~~~g~~~~l~Kp~~~~~l~~~i~~~~~ 117 (120)
T 2a9o_A 78 LSA--KDSEFDKVIG-LELGADDYVTKPFSNRELQARVKALLR 117 (120)
T ss_dssp EES--CCSHHHHHHH-HHHTCSEEEESSCCHHHHHHHHHHHHH
T ss_pred Eec--CCchHHHHHH-HhCCHhheEeCCCCHHHHHHHHHHHHc
Confidence 653 2222221110 113567899999999999999887753
No 371
>1rcu_A Conserved hypothetical protein VT76; structural genomics, PSI, protein structure initiative, northeast structural genomics consortium, NESG; 2.50A {Thermotoga maritima} SCOP: c.129.1.1
Probab=25.93 E-value=1.1e+02 Score=26.12 Aligned_cols=38 Identities=13% Similarity=0.135 Sum_probs=26.8
Q ss_pred HHHHHHhcCCEEEECCCCCCCc--hHHHHHhhcCCceEEEec
Q 011163 376 LLHLIFSGSDIILCHSFHDPLL--QVPLKALKYGAAPIAVTS 415 (492)
Q Consensus 376 ~~~~~~~~adi~v~pS~~E~~g--lv~lEAma~G~PvV~~~~ 415 (492)
....+...||.+|.-.- ++| ..+.||+..++|+++.+.
T Consensus 111 Rk~~m~~~sda~IvlpG--G~GTL~E~~eal~~~kPV~lln~ 150 (195)
T 1rcu_A 111 RSFVLLRNADVVVSIGG--EIGTAIEILGAYALGKPVILLRG 150 (195)
T ss_dssp HHHHHHTTCSEEEEESC--CHHHHHHHHHHHHTTCCEEEETT
T ss_pred HHHHHHHhCCEEEEecC--CCcHHHHHHHHHhcCCCEEEECC
Confidence 34456677888776532 355 346888999999999864
No 372
>2dtx_A Glucose 1-dehydrogenase related protein; rossmann fold, oxidoreductase; HET: BMA; 1.60A {Thermoplasma acidophilum} PDB: 2dtd_A* 2dte_A* 2zk7_A
Probab=25.84 E-value=79 Score=28.16 Aligned_cols=33 Identities=6% Similarity=0.109 Sum_probs=24.0
Q ss_pred eEEEEeeccccccccCcHHHHHhHHHHHHHHCCCeEEEEeec
Q 011163 10 HIIHICTEMDPLVSIGSLASYVTGLSGALQRKGHLVEVILPK 51 (492)
Q Consensus 10 kIl~v~~~~~p~~~~GG~~~~~~~l~~~L~~~Gh~V~vi~~~ 51 (492)
|.++||- ..||+|. .+++.|.++|++|.++...
T Consensus 9 k~vlVTG------as~gIG~---~ia~~l~~~G~~V~~~~r~ 41 (264)
T 2dtx_A 9 KVVIVTG------ASMGIGR---AIAERFVDEGSKVIDLSIH 41 (264)
T ss_dssp CEEEEES------CSSHHHH---HHHHHHHHTTCEEEEEESS
T ss_pred CEEEEeC------CCCHHHH---HHHHHHHHCCCEEEEEecC
Confidence 5556663 3577774 6788999999999887653
No 373
>4ekn_B Aspartate carbamoyltransferase; atcase, aspartate transcarbamoylase, pyrimidine biosynthesis thermostability, substrate channeling; 2.50A {Methanocaldococcus jannaschii} PDB: 3e2p_A 2rgw_A
Probab=25.82 E-value=1.3e+02 Score=27.65 Aligned_cols=112 Identities=12% Similarity=0.069 Sum_probs=0.0
Q ss_pred ecCCCCCCCcCCCCCcccccccCccCccChHHHHHHHHHHhCCCCCCCceEEEEEeccccccCHHHHHHHHHHHhHcCcE
Q 011163 259 APCGFDSSTWDPSNDKFLTENYCAEDMKGKTVCKVTLQQQLGLSKDASTIVVGCIFSDVSDVFLENLKAVVRGAKMRGIQ 338 (492)
Q Consensus 259 I~nGvd~~~f~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~lg~~~~~~~~~i~~~grl~~~Kg~~~li~a~~~l~~~~~~ 338 (492)
|-||-|.+.++|. ..-.+--.+++++|--.+ +.+.++|-+....=...++.++..+. +++
T Consensus 121 VINag~g~~~HPt---------------Q~LaDl~Ti~e~~g~l~g---lkva~vGD~~~~rva~Sl~~~~~~~~--G~~ 180 (306)
T 4ekn_B 121 IINAGDGSNQHPT---------------QTLLDLYTIMREIGRIDG---IKIAFVGDLKYGRTVHSLVYALSLFE--NVE 180 (306)
T ss_dssp EEESCSSSSCCHH---------------HHHHHHHHHHHHHSCSTT---CEEEEESCTTTCHHHHHHHHHHHTSS--SCE
T ss_pred EEeCCCCCCcCcH---------------HHHHHHHHHHHHhCCcCC---CEEEEEcCCCCCcHHHHHHHHHHhcC--CCE
Q ss_pred EEEEecCCChhHHHHHHHHHHHhCCCeEEEEeccCHHHHHHHHhcCCEEEECCC-CCCCc
Q 011163 339 FVFTGTNKLPSASRALVSFQEELKDGIVIFVDSYDDALLHLIFSGSDIILCHSF-HDPLL 397 (492)
Q Consensus 339 lvivG~g~~~~~~~~l~~~~~~~~~~~v~~~~~~~~~~~~~~~~~adi~v~pS~-~E~~g 397 (492)
+.+++ .+.-...+.+.+.+++.+ ..+......++.. ..||++....+ .|.++
T Consensus 181 v~~~~-P~~~~~~~~~~~~~~~~g-~~~~~~~d~~eav-----~~aDvvy~~~~q~er~~ 233 (306)
T 4ekn_B 181 MYFVS-PKELRLPKDIIEDLKAKN-IKFYEKESLDDLD-----DDIDVLYVTRIQKERFP 233 (306)
T ss_dssp EEEEC-CGGGCCCHHHHHHHHHTT-CCEEEESCGGGCC-----TTCSEEEECCCCGGGCC
T ss_pred EEEEC-CcccccCHHHHHHHHHcC-CEEEEEcCHHHHh-----cCCCEEEeCCcccccCC
No 374
>2cfc_A 2-(R)-hydroxypropyl-COM dehydrogenase; NAD, oxidoreductase; HET: NAD KPC; 1.8A {Xanthobacter autotrophicus}
Probab=25.71 E-value=72 Score=27.86 Aligned_cols=32 Identities=6% Similarity=0.083 Sum_probs=22.8
Q ss_pred eEEEEeeccccccccCcHHHHHhHHHHHHHHCCCeEEEEee
Q 011163 10 HIIHICTEMDPLVSIGSLASYVTGLSGALQRKGHLVEVILP 50 (492)
Q Consensus 10 kIl~v~~~~~p~~~~GG~~~~~~~l~~~L~~~Gh~V~vi~~ 50 (492)
|.++|+- ..||+|. .+++.|.++|++|.++..
T Consensus 3 k~vlItG------asggiG~---~~a~~l~~~G~~V~~~~r 34 (250)
T 2cfc_A 3 RVAIVTG------ASSGNGL---AIATRFLARGDRVAALDL 34 (250)
T ss_dssp CEEEEET------TTSHHHH---HHHHHHHHTTCEEEEEES
T ss_pred CEEEEeC------CCchHHH---HHHHHHHHCCCEEEEEeC
Confidence 4555553 3466664 678889999999888764
No 375
>1zgz_A Torcad operon transcriptional regulatory protein; two-component system, gene regulation, transcription factor, respiratory system; 1.80A {Escherichia coli} SCOP: c.23.1.1
Probab=25.70 E-value=2e+02 Score=21.07 Aligned_cols=110 Identities=17% Similarity=0.077 Sum_probs=60.1
Q ss_pred cEEEEEecCCChhHHHHHHHHHHHhCCCeEEEEeccCHHHHHHHHh--cCCEEEECCC-CCCCchHHHHHhh--cCCceE
Q 011163 337 IQFVFTGTNKLPSASRALVSFQEELKDGIVIFVDSYDDALLHLIFS--GSDIILCHSF-HDPLLQVPLKALK--YGAAPI 411 (492)
Q Consensus 337 ~~lvivG~g~~~~~~~~l~~~~~~~~~~~v~~~~~~~~~~~~~~~~--~adi~v~pS~-~E~~glv~lEAma--~G~PvV 411 (492)
.+++|+.+ ++...+.++...+..+ -.+.. ..+.++....+. ..|++++--. -+..|+.+++.+. ..+|+|
T Consensus 3 ~~ilivdd--~~~~~~~l~~~L~~~~-~~v~~--~~~~~~~~~~~~~~~~dlvi~d~~l~~~~g~~~~~~l~~~~~~~ii 77 (122)
T 1zgz_A 3 HHIVIVED--EPVTQARLQSYFTQEG-YTVSV--TASGAGLREIMQNQSVDLILLDINLPDENGLMLTRALRERSTVGII 77 (122)
T ss_dssp CEEEEECS--SHHHHHHHHHHHHHTT-CEEEE--ESSHHHHHHHHHHSCCSEEEEESCCSSSCHHHHHHHHHTTCCCEEE
T ss_pred cEEEEEEC--CHHHHHHHHHHHHHCC-CeEEE--ecCHHHHHHHHhcCCCCEEEEeCCCCCCChHHHHHHHHhcCCCCEE
Confidence 35666663 3344555666555542 34432 223333323332 4688776443 2345676666664 356777
Q ss_pred EEecCCCcccccccccccccceeeeeecCCCHHHHHHHHHHHh
Q 011163 412 AVTSSDIEFRHFAEFDHESTRFSRFISSTFGNISLSQALEEIK 454 (492)
Q Consensus 412 ~~~~~~gg~~e~v~~~~~~~g~~G~~~~~~~~~~l~~ai~~~~ 454 (492)
+... ..-.+..... ...|..+|+..|.+.+.|..++..++
T Consensus 78 ~~s~--~~~~~~~~~~-~~~ga~~~l~Kp~~~~~l~~~i~~~~ 117 (122)
T 1zgz_A 78 LVTG--RSDRIDRIVG-LEMGADDYVTKPLELRELVVRVKNLL 117 (122)
T ss_dssp EEES--SCCHHHHHHH-HHHTCSEEEESSCCHHHHHHHHHHHH
T ss_pred EEEC--CCChhhHHHH-HHhCHHHHccCCCCHHHHHHHHHHHH
Confidence 6543 2222221110 11356789999999999999888765
No 376
>2oqr_A Sensory transduction protein REGX3; response regulator, winged-helix-turn-helix, DNA-binding, 3D swapping, two component system; 2.03A {Mycobacterium tuberculosis H37RV}
Probab=25.61 E-value=3e+02 Score=23.13 Aligned_cols=112 Identities=13% Similarity=0.055 Sum_probs=62.5
Q ss_pred cEEEEEecCCChhHHHHHHHHHHHhCCCeEEEEeccCHHHHHHHH--hcCCEEEECCC-CCCCchHHHHHhh--cCCceE
Q 011163 337 IQFVFTGTNKLPSASRALVSFQEELKDGIVIFVDSYDDALLHLIF--SGSDIILCHSF-HDPLLQVPLKALK--YGAAPI 411 (492)
Q Consensus 337 ~~lvivG~g~~~~~~~~l~~~~~~~~~~~v~~~~~~~~~~~~~~~--~~adi~v~pS~-~E~~glv~lEAma--~G~PvV 411 (492)
.+++|+.+ ++...+.++...+..+ -.|.. ..+.++....+ ...|++++=-. -+.-|+.+++.+. ..+|+|
T Consensus 5 ~~ilivdd--~~~~~~~l~~~L~~~g-~~v~~--~~~~~~al~~~~~~~~dlvllD~~l~~~~g~~~~~~l~~~~~~~ii 79 (230)
T 2oqr_A 5 TSVLIVED--EESLADPLAFLLRKEG-FEATV--VTDGPAALAEFDRAGADIVLLDLMLPGMSGTDVCKQLRARSSVPVI 79 (230)
T ss_dssp CEEEEECS--CHHHHHHHHHHHHHTT-CEEEE--ECSHHHHHHHHHHHCCSEEEEESSCSSSCHHHHHHHHHHHCSCSEE
T ss_pred CeEEEEeC--CHHHHHHHHHHHHHCC-CEEEE--ECCHHHHHHHHhccCCCEEEEECCCCCCCHHHHHHHHHcCCCCCEE
Confidence 46777763 3445556666665542 33432 22333322322 24688776543 3445666666653 367777
Q ss_pred EEecCCCcccccccccccccceeeeeecCCCHHHHHHHHHHHhcC
Q 011163 412 AVTSSDIEFRHFAEFDHESTRFSRFISSTFGNISLSQALEEIKNN 456 (492)
Q Consensus 412 ~~~~~~gg~~e~v~~~~~~~g~~G~~~~~~~~~~l~~ai~~~~~~ 456 (492)
+... ..-.+.+... ...|..||+..|.+++.|.++|..++..
T Consensus 80 ~lt~--~~~~~~~~~~-~~~ga~~~l~Kp~~~~~l~~~i~~~~~~ 121 (230)
T 2oqr_A 80 MVTA--RDSEIDKVVG-LELGADDYVTKPYSARELIARIRAVLRR 121 (230)
T ss_dssp EEEC--CHHHHHHHHH-HHHCCSCCCCSSCCHHHHHHHHHHHHTT
T ss_pred EEeC--CCcHHHHHHH-HHcCCCEEEeCCCCHHHHHHHHHHHHhh
Confidence 7543 2222221110 1135568999999999999999988753
No 377
>2pd4_A Enoyl-[acyl-carrier-protein] reductase [NADH]; antibacterial target, type II fatty acid biosynthesis, enoyl-ACP-reductase, FABI; HET: NAD DCN; 2.30A {Helicobacter pylori} SCOP: c.2.1.2 PDB: 2pd3_A*
Probab=25.46 E-value=84 Score=28.09 Aligned_cols=33 Identities=15% Similarity=0.105 Sum_probs=24.7
Q ss_pred eEEEEeecccccccc--CcHHHHHhHHHHHHHHCCCeEEEEeec
Q 011163 10 HIIHICTEMDPLVSI--GSLASYVTGLSGALQRKGHLVEVILPK 51 (492)
Q Consensus 10 kIl~v~~~~~p~~~~--GG~~~~~~~l~~~L~~~Gh~V~vi~~~ 51 (492)
|.++||- .. ||+|. .+++.|.++|++|.++...
T Consensus 7 k~vlVTG------as~~~gIG~---~~a~~l~~~G~~V~~~~r~ 41 (275)
T 2pd4_A 7 KKGLIVG------VANNKSIAY---GIAQSCFNQGATLAFTYLN 41 (275)
T ss_dssp CEEEEEC------CCSTTSHHH---HHHHHHHTTTCEEEEEESS
T ss_pred CEEEEEC------CCCCCcHHH---HHHHHHHHCCCEEEEEeCC
Confidence 5666664 34 78885 6788899999999887654
No 378
>2bll_A Protein YFBG; decarboxylase, short chain dehydrogenase, L-ARA4N biosynthes methyltransferase, transferase; 2.3A {Escherichia coli} SCOP: c.2.1.2 PDB: 1u9j_A 1z73_A 1z75_A 1z7b_A 1z74_A
Probab=25.40 E-value=57 Score=30.12 Aligned_cols=27 Identities=19% Similarity=-0.072 Sum_probs=18.8
Q ss_pred CcHHHHHhHHHHHHHHC-CCeEEEEeec
Q 011163 25 GSLASYVTGLSGALQRK-GHLVEVILPK 51 (492)
Q Consensus 25 GG~~~~~~~l~~~L~~~-Gh~V~vi~~~ 51 (492)
||.|-.=..+++.|.++ ||+|.++...
T Consensus 7 GatG~iG~~l~~~L~~~~g~~V~~~~r~ 34 (345)
T 2bll_A 7 GVNGFIGNHLTERLLREDHYEVYGLDIG 34 (345)
T ss_dssp TCSSHHHHHHHHHHHHSTTCEEEEEESC
T ss_pred CCCcHHHHHHHHHHHHhCCCEEEEEeCC
Confidence 33344445677889898 8999988754
No 379
>1pzg_A LDH, lactate dehydrogenase; apicomplexa, APAD, tetramer, rossmann fold, oxidoreductase; HET: CME A3D; 1.60A {Toxoplasma gondii} SCOP: c.2.1.5 d.162.1.1 PDB: 1pzf_A* 1pze_A* 1pzh_A* 3om9_A* 1sov_A 1sow_A* 3czm_A*
Probab=25.34 E-value=61 Score=30.28 Aligned_cols=34 Identities=9% Similarity=-0.032 Sum_probs=23.5
Q ss_pred CCCceEEEEeeccccccccCcHHHHHhHHHHHHHHCCC-eEEEEee
Q 011163 6 RNGFHIIHICTEMDPLVSIGSLASYVTGLSGALQRKGH-LVEVILP 50 (492)
Q Consensus 6 ~~~mkIl~v~~~~~p~~~~GG~~~~~~~l~~~L~~~Gh-~V~vi~~ 50 (492)
.++|||++|.. |.++.. ++..|+..|| +|.++-.
T Consensus 7 ~~~~kI~VIGa--------G~vG~~---lA~~la~~g~~~V~L~D~ 41 (331)
T 1pzg_A 7 QRRKKVAMIGS--------GMIGGT---MGYLCALRELADVVLYDV 41 (331)
T ss_dssp SCCCEEEEECC--------SHHHHH---HHHHHHHHTCCEEEEECS
T ss_pred CCCCEEEEECC--------CHHHHH---HHHHHHhCCCCeEEEEEC
Confidence 44589988663 555544 8888889999 8655543
No 380
>2o4c_A Erythronate-4-phosphate dehydrogenase; erythronate-4-phsphate, NAD, tartrate, phosph oxidoreductase; HET: NAD TLA; 2.30A {Pseudomonas aeruginosa}
Probab=25.23 E-value=2.4e+02 Score=26.88 Aligned_cols=44 Identities=20% Similarity=0.180 Sum_probs=26.3
Q ss_pred HHHHHhcCCEEEEC--CCCC----CCch---HHHHHhhcCCceEEEecCCCcccc
Q 011163 377 LHLIFSGSDIILCH--SFHD----PLLQ---VPLKALKYGAAPIAVTSSDIEFRH 422 (492)
Q Consensus 377 ~~~~~~~adi~v~p--S~~E----~~gl---v~lEAma~G~PvV~~~~~~gg~~e 422 (492)
+.++++.||++++. ...| +.++ -.++.|..|.-+|-+.. |++.+
T Consensus 161 l~ell~~aDvV~l~~Plt~~g~~~T~~li~~~~l~~mk~gailIN~sR--G~vvd 213 (380)
T 2o4c_A 161 LERLLAEADVISLHTPLNRDGEHPTRHLLDEPRLAALRPGTWLVNASR--GAVVD 213 (380)
T ss_dssp HHHHHHHCSEEEECCCCCSSSSSCCTTSBCHHHHHTSCTTEEEEECSC--GGGBC
T ss_pred HHHHHHhCCEEEEeccCccccccchhhhcCHHHHhhCCCCcEEEECCC--CcccC
Confidence 45678899998874 3334 4343 35677777764444444 65544
No 381
>2ae2_A Protein (tropinone reductase-II); oxidoreductase, tropane alkaloid biosynthesis, reduction of tropinone to pseudotropine; HET: NAP PTO; 1.90A {Datura stramonium} SCOP: c.2.1.2 PDB: 2ae1_A* 1ipe_A* 1ipf_A*
Probab=25.12 E-value=85 Score=27.74 Aligned_cols=32 Identities=13% Similarity=0.062 Sum_probs=23.6
Q ss_pred eEEEEeeccccccccCcHHHHHhHHHHHHHHCCCeEEEEee
Q 011163 10 HIIHICTEMDPLVSIGSLASYVTGLSGALQRKGHLVEVILP 50 (492)
Q Consensus 10 kIl~v~~~~~p~~~~GG~~~~~~~l~~~L~~~Gh~V~vi~~ 50 (492)
|.++||- ..||+|. .+++.|.++|++|.++..
T Consensus 10 k~vlVTG------as~giG~---~ia~~l~~~G~~V~~~~r 41 (260)
T 2ae2_A 10 CTALVTG------GSRGIGY---GIVEELASLGASVYTCSR 41 (260)
T ss_dssp CEEEEES------CSSHHHH---HHHHHHHHTTCEEEEEES
T ss_pred CEEEEEC------CCcHHHH---HHHHHHHHCCCEEEEEeC
Confidence 5566664 3577775 678889999999987764
No 382
>3ic5_A Putative saccharopine dehydrogenase; structural genomics, APC63807.2, N-terminal domain, saccharo dehydrogenase, PSI-2; HET: MSE; 2.08A {Ruegeria pomeroyi}
Probab=25.10 E-value=95 Score=22.99 Aligned_cols=33 Identities=15% Similarity=0.198 Sum_probs=22.4
Q ss_pred CceEEEEeeccccccccCcHHHHHhHHHHHHHHCC-CeEEEEeec
Q 011163 8 GFHIIHICTEMDPLVSIGSLASYVTGLSGALQRKG-HLVEVILPK 51 (492)
Q Consensus 8 ~mkIl~v~~~~~p~~~~GG~~~~~~~l~~~L~~~G-h~V~vi~~~ 51 (492)
.|+|+++. . |++| ..+++.|.+.| ++|.++...
T Consensus 5 ~~~v~I~G-------~-G~iG---~~~~~~l~~~g~~~v~~~~r~ 38 (118)
T 3ic5_A 5 RWNICVVG-------A-GKIG---QMIAALLKTSSNYSVTVADHD 38 (118)
T ss_dssp CEEEEEEC-------C-SHHH---HHHHHHHHHCSSEEEEEEESC
T ss_pred cCeEEEEC-------C-CHHH---HHHHHHHHhCCCceEEEEeCC
Confidence 46776643 2 5555 45777889999 898877653
No 383
>2ayx_A Sensor kinase protein RCSC; two independent structural domains, transferase; NMR {Escherichia coli} SCOP: c.23.1.1 c.23.1.6 PDB: 2ayz_A 2ayy_A
Probab=25.08 E-value=3.4e+02 Score=23.57 Aligned_cols=69 Identities=13% Similarity=-0.016 Sum_probs=39.5
Q ss_pred CCEEEECCC-CCCCchHHHHHh---hcCCceEEEecCCCcccccccccccccceeeeeecCCCHHHHHHHHHHHhc
Q 011163 384 SDIILCHSF-HDPLLQVPLKAL---KYGAAPIAVTSSDIEFRHFAEFDHESTRFSRFISSTFGNISLSQALEEIKN 455 (492)
Q Consensus 384 adi~v~pS~-~E~~glv~lEAm---a~G~PvV~~~~~~gg~~e~v~~~~~~~g~~G~~~~~~~~~~l~~ai~~~~~ 455 (492)
.|++++=-. -+.-|+.+++.+ ...+|+|+... ....+..... ...|.++|+..|.+.+.|.++|..++.
T Consensus 174 ~dlvl~D~~mp~~~G~~l~~~ir~~~~~~piI~lt~--~~~~~~~~~~-~~~G~~~~l~KP~~~~~L~~~l~~~~~ 246 (254)
T 2ayx_A 174 IDIVLSDVNMPNMDGYRLTQRIRQLGLTLPVIGVTA--NALAEEKQRC-LESGMDSCLSKPVTLDVIKQTLTLYAE 246 (254)
T ss_dssp CSEEEEEESSCSSCCHHHHHHHHHHHCCSCEEEEES--STTSHHHHHH-HHCCCEEEEESSCCHHHHHHHHHHHHH
T ss_pred CCEEEEcCCCCCCCHHHHHHHHHhcCCCCcEEEEEC--CCCHHHHHHH-HHcCCceEEECCCCHHHHHHHHHHHHH
Confidence 455554221 123355554444 24678887654 2222222110 114667899999999999999988753
No 384
>3orq_A N5-carboxyaminoimidazole ribonucleotide synthetas; ATP-grAsp superfamily, ligase,biosynthetic protein; HET: MSE ADP; 2.23A {Staphylococcus aureus subsp} PDB: 3orr_A
Probab=24.86 E-value=90 Score=29.61 Aligned_cols=38 Identities=29% Similarity=0.245 Sum_probs=26.9
Q ss_pred cccCCCceEEEEeeccccccccCcHHHHHhHHHHHHHHCCCeEEEEeec
Q 011163 3 KWLRNGFHIIHICTEMDPLVSIGSLASYVTGLSGALQRKGHLVEVILPK 51 (492)
Q Consensus 3 ~~~~~~mkIl~v~~~~~p~~~~GG~~~~~~~l~~~L~~~Gh~V~vi~~~ 51 (492)
++..+.++|+++.. |.+ -..+++++.++|++|.++.+.
T Consensus 7 ~~~~~~~~IlIlG~--------G~l---g~~la~aa~~lG~~viv~d~~ 44 (377)
T 3orq_A 7 NKLKFGATIGIIGG--------GQL---GKMMAQSAQKMGYKVVVLDPS 44 (377)
T ss_dssp CCCCTTCEEEEECC--------SHH---HHHHHHHHHHTTCEEEEEESC
T ss_pred ccCCCCCEEEEECC--------CHH---HHHHHHHHHHCCCEEEEEECC
Confidence 34445567877653 444 456788999999999999764
No 385
>2x5n_A SPRPN10, 26S proteasome regulatory subunit RPN10; nuclear protein, nucleus, ubiquitin; 1.30A {Schizosaccharomyces pombe}
Probab=24.84 E-value=2e+02 Score=24.16 Aligned_cols=50 Identities=16% Similarity=0.050 Sum_probs=32.6
Q ss_pred EEEEeccccccCHHHHHHHHHHHhHcCcEEEEEecCCChhHHHHHHHHHHHhC
Q 011163 310 VGCIFSDVSDVFLENLKAVVRGAKMRGIQFVFTGTNKLPSASRALVSFQEELK 362 (492)
Q Consensus 310 i~~~grl~~~Kg~~~li~a~~~l~~~~~~lvivG~g~~~~~~~~l~~~~~~~~ 362 (492)
++..+-+. -+...+.++++.+++.++++.++|-|.+..-.+ ++++++..+
T Consensus 111 il~~~~~~--~~~~~~~~~a~~lk~~gi~v~~Ig~G~~~~~~~-l~~la~~~n 160 (192)
T 2x5n_A 111 AFVGSPIV--EDEKNLIRLAKRMKKNNVAIDIIHIGELQNESA-LQHFIDAAN 160 (192)
T ss_dssp EEECSCCS--SCHHHHHHHHHHHHHTTEEEEEEEESCC---CH-HHHHHHHHC
T ss_pred EEEECCCC--CCchhHHHHHHHHHHCCCEEEEEEeCCCCccHH-HHHHHHhcc
Confidence 33334442 235578888888888899999999775422224 888887754
No 386
>3ius_A Uncharacterized conserved protein; APC63810, silicibacter pomeroyi DSS, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.66A {Ruegeria pomeroyi dss-3}
Probab=24.84 E-value=58 Score=29.19 Aligned_cols=24 Identities=21% Similarity=0.047 Sum_probs=18.5
Q ss_pred HHHHhHHHHHHHHCCCeEEEEeec
Q 011163 28 ASYVTGLSGALQRKGHLVEVILPK 51 (492)
Q Consensus 28 ~~~~~~l~~~L~~~Gh~V~vi~~~ 51 (492)
|-.=..++++|.++||+|.+++..
T Consensus 14 G~iG~~l~~~L~~~g~~V~~~~r~ 37 (286)
T 3ius_A 14 GYTARVLSRALAPQGWRIIGTSRN 37 (286)
T ss_dssp CHHHHHHHHHHGGGTCEEEEEESC
T ss_pred cHHHHHHHHHHHHCCCEEEEEEcC
Confidence 444456788899999999998754
No 387
>2rhc_B Actinorhodin polyketide ketoreductase; oxidoreductase, combinatorial biosynthesis, short chain dehydrogenase/reductase; HET: NAP EMO; 2.10A {Streptomyces coelicolor} SCOP: c.2.1.2 PDB: 2rh4_A* 1w4z_A* 3csd_B* 3qrw_A* 3ri3_B* 2rhr_B* 1x7g_A* 1x7h_A* 1xr3_A*
Probab=24.82 E-value=85 Score=28.15 Aligned_cols=32 Identities=13% Similarity=0.162 Sum_probs=24.0
Q ss_pred eEEEEeeccccccccCcHHHHHhHHHHHHHHCCCeEEEEee
Q 011163 10 HIIHICTEMDPLVSIGSLASYVTGLSGALQRKGHLVEVILP 50 (492)
Q Consensus 10 kIl~v~~~~~p~~~~GG~~~~~~~l~~~L~~~Gh~V~vi~~ 50 (492)
|.++||- ..||+|. .+++.|.++|++|.++..
T Consensus 23 k~vlVTG------as~gIG~---~ia~~l~~~G~~V~~~~r 54 (277)
T 2rhc_B 23 EVALVTG------ATSGIGL---EIARRLGKEGLRVFVCAR 54 (277)
T ss_dssp CEEEEET------CSSHHHH---HHHHHHHHTTCEEEEEES
T ss_pred CEEEEEC------CCCHHHH---HHHHHHHHCCCEEEEEeC
Confidence 6667774 3577775 578889999999988764
No 388
>2ag5_A DHRS6, dehydrogenase/reductase (SDR family) member 6; protein-CO-factor complex, structural genomics, structural G consortium, SGC, oxidoreductase; HET: NAD; 1.84A {Homo sapiens} SCOP: c.2.1.2
Probab=24.82 E-value=77 Score=27.76 Aligned_cols=32 Identities=16% Similarity=0.156 Sum_probs=23.0
Q ss_pred eEEEEeeccccccccCcHHHHHhHHHHHHHHCCCeEEEEee
Q 011163 10 HIIHICTEMDPLVSIGSLASYVTGLSGALQRKGHLVEVILP 50 (492)
Q Consensus 10 kIl~v~~~~~p~~~~GG~~~~~~~l~~~L~~~Gh~V~vi~~ 50 (492)
|+++||- ..||+| ..+++.|.++|++|.++..
T Consensus 7 k~vlVTG------as~gIG---~~ia~~l~~~G~~V~~~~r 38 (246)
T 2ag5_A 7 KVIILTA------AAQGIG---QAAALAFAREGAKVIATDI 38 (246)
T ss_dssp CEEEESS------TTSHHH---HHHHHHHHHTTCEEEEEES
T ss_pred CEEEEeC------CCcHHH---HHHHHHHHHCCCEEEEEEC
Confidence 4556563 346776 5678889999999988764
No 389
>3sju_A Keto reductase; short-chain dehydrogenase, oxidoreductase; HET: NDP; 2.40A {Streptomyces griseoruber}
Probab=24.78 E-value=72 Score=28.72 Aligned_cols=33 Identities=9% Similarity=0.040 Sum_probs=24.2
Q ss_pred ceEEEEeeccccccccCcHHHHHhHHHHHHHHCCCeEEEEee
Q 011163 9 FHIIHICTEMDPLVSIGSLASYVTGLSGALQRKGHLVEVILP 50 (492)
Q Consensus 9 mkIl~v~~~~~p~~~~GG~~~~~~~l~~~L~~~Gh~V~vi~~ 50 (492)
.|+++||- ..||+| ..+++.|.++|++|.++..
T Consensus 24 ~k~~lVTG------as~GIG---~aia~~la~~G~~V~~~~r 56 (279)
T 3sju_A 24 PQTAFVTG------VSSGIG---LAVARTLAARGIAVYGCAR 56 (279)
T ss_dssp -CEEEEES------TTSHHH---HHHHHHHHHTTCEEEEEES
T ss_pred CCEEEEeC------CCCHHH---HHHHHHHHHCCCEEEEEeC
Confidence 36777774 347777 5678899999999877764
No 390
>3n7t_A Macrophage binding protein; seattle structural genomics center for infectious disease, S macrophage, pathogenic fungus, coccidioidomycosis; 2.10A {Coccidioides immitis} SCOP: c.23.16.0
Probab=24.74 E-value=1.3e+02 Score=26.75 Aligned_cols=44 Identities=18% Similarity=0.049 Sum_probs=28.0
Q ss_pred ceEEEEeeccccc-----cccCcHHHHHhHHHHHHHHCCCeEEEEeecC
Q 011163 9 FHIIHICTEMDPL-----VSIGSLASYVTGLSGALQRKGHLVEVILPKY 52 (492)
Q Consensus 9 mkIl~v~~~~~p~-----~~~GG~~~~~~~l~~~L~~~Gh~V~vi~~~~ 52 (492)
.|||+|.+..... ...|=-..=+..-...|.+.|++|++++|..
T Consensus 10 kkvlvvlt~~~~~~~~~g~~tG~~~~E~~~p~~~l~~aG~~V~~aSp~g 58 (247)
T 3n7t_A 10 RKALLAITSAHPPFWPDGKRTGLFFSEALHPFNELTAAGFEVDVASETG 58 (247)
T ss_dssp SEEEEECCCCCCBCSTTSCBCCBCHHHHHHHHHHHHHTTCEEEEEESSS
T ss_pred CeEEEEECCCCcccCCCCCCCcccHHHHHHHHHHHHHCCCEEEEEeCCC
Confidence 4799998864210 0113223334445667889999999999864
No 391
>2ehd_A Oxidoreductase, oxidoreductase, short-chain dehydrogenase/reducta; rossman fold, structural genomics, NPPSFA; 2.40A {Thermus thermophilus}
Probab=24.72 E-value=78 Score=27.32 Aligned_cols=24 Identities=17% Similarity=0.192 Sum_probs=18.9
Q ss_pred cCcHHHHHhHHHHHHHHCCCeEEEEee
Q 011163 24 IGSLASYVTGLSGALQRKGHLVEVILP 50 (492)
Q Consensus 24 ~GG~~~~~~~l~~~L~~~Gh~V~vi~~ 50 (492)
.||+| ..+++.|.++|++|.++..
T Consensus 14 sggiG---~~~a~~l~~~G~~V~~~~r 37 (234)
T 2ehd_A 14 SRGIG---EATARLLHAKGYRVGLMAR 37 (234)
T ss_dssp TSHHH---HHHHHHHHHTTCEEEEEES
T ss_pred CcHHH---HHHHHHHHHCCCEEEEEEC
Confidence 46666 5678889999999988764
No 392
>1txg_A Glycerol-3-phosphate dehydrogenase [NAD(P)+]; oxidoreductase; 1.70A {Archaeoglobus fulgidus} SCOP: a.100.1.6 c.2.1.6
Probab=24.71 E-value=51 Score=30.54 Aligned_cols=31 Identities=19% Similarity=0.269 Sum_probs=23.0
Q ss_pred ceEEEEeeccccccccCcHHHHHhHHHHHHHHCCCeEEEEee
Q 011163 9 FHIIHICTEMDPLVSIGSLASYVTGLSGALQRKGHLVEVILP 50 (492)
Q Consensus 9 mkIl~v~~~~~p~~~~GG~~~~~~~l~~~L~~~Gh~V~vi~~ 50 (492)
|||++|.. |.+| ..++..|.+.||+|+++..
T Consensus 1 m~I~iiG~--------G~mG---~~~a~~L~~~g~~V~~~~r 31 (335)
T 1txg_A 1 MIVSILGA--------GAMG---SALSVPLVDNGNEVRIWGT 31 (335)
T ss_dssp CEEEEESC--------CHHH---HHHHHHHHHHCCEEEEECC
T ss_pred CEEEEECc--------CHHH---HHHHHHHHhCCCeEEEEEc
Confidence 78887653 5555 4457888899999998865
No 393
>2hun_A 336AA long hypothetical DTDP-glucose 4,6-dehydrat; rossmann fold, structural genomics, NPPSFA; HET: NAD; 2.07A {Pyrococcus horikoshii}
Probab=24.69 E-value=53 Score=30.29 Aligned_cols=34 Identities=12% Similarity=0.082 Sum_probs=22.5
Q ss_pred CceEEEEeeccccccccCcHHHHHhHHHHHHHHCC--CeEEEEeec
Q 011163 8 GFHIIHICTEMDPLVSIGSLASYVTGLSGALQRKG--HLVEVILPK 51 (492)
Q Consensus 8 ~mkIl~v~~~~~p~~~~GG~~~~~~~l~~~L~~~G--h~V~vi~~~ 51 (492)
.|||++.. ..|++| ..+++.|.++| ++|.++...
T Consensus 3 ~m~vlVTG-------atG~iG---~~l~~~L~~~g~~~~V~~~~r~ 38 (336)
T 2hun_A 3 SMKLLVTG-------GMGFIG---SNFIRYILEKHPDWEVINIDKL 38 (336)
T ss_dssp CCEEEEET-------TTSHHH---HHHHHHHHHHCTTCEEEEEECC
T ss_pred CCeEEEEC-------CCchHH---HHHHHHHHHhCCCCEEEEEecC
Confidence 48876532 246666 45677888887 888877643
No 394
>1xq6_A Unknown protein; structural genomics, protein structure initiative, CESG, AT5G02240, NADP, center for eukaryotic structural genomics; HET: NAP; 1.80A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 1ybm_A* 2q46_A* 2q4b_A*
Probab=24.57 E-value=85 Score=27.19 Aligned_cols=25 Identities=8% Similarity=0.068 Sum_probs=18.7
Q ss_pred cCcHHHHHhHHHHHHHHC--CCeEEEEeec
Q 011163 24 IGSLASYVTGLSGALQRK--GHLVEVILPK 51 (492)
Q Consensus 24 ~GG~~~~~~~l~~~L~~~--Gh~V~vi~~~ 51 (492)
.||+| ..+++.|.++ |++|.++...
T Consensus 13 sG~iG---~~l~~~l~~~~~g~~V~~~~r~ 39 (253)
T 1xq6_A 13 SGRTG---QIVYKKLKEGSDKFVAKGLVRS 39 (253)
T ss_dssp TSHHH---HHHHHHHHHTTTTCEEEEEESC
T ss_pred CcHHH---HHHHHHHHhcCCCcEEEEEEcC
Confidence 36666 5677889999 8999888753
No 395
>2gdz_A NAD+-dependent 15-hydroxyprostaglandin dehydrogen; dehydrogenase, structural genomics, SH dehydrogenase/reductase, inflammation; HET: NAD; 1.65A {Homo sapiens} SCOP: c.2.1.2
Probab=24.55 E-value=87 Score=27.78 Aligned_cols=32 Identities=16% Similarity=0.178 Sum_probs=23.5
Q ss_pred eEEEEeeccccccccCcHHHHHhHHHHHHHHCCCeEEEEee
Q 011163 10 HIIHICTEMDPLVSIGSLASYVTGLSGALQRKGHLVEVILP 50 (492)
Q Consensus 10 kIl~v~~~~~p~~~~GG~~~~~~~l~~~L~~~Gh~V~vi~~ 50 (492)
|.++||- ..||+|. .+++.|.++|++|.++..
T Consensus 8 k~vlVTG------as~gIG~---~ia~~l~~~G~~V~~~~r 39 (267)
T 2gdz_A 8 KVALVTG------AAQGIGR---AFAEALLLKGAKVALVDW 39 (267)
T ss_dssp CEEEEET------TTSHHHH---HHHHHHHHTTCEEEEEES
T ss_pred CEEEEEC------CCCcHHH---HHHHHHHHCCCEEEEEEC
Confidence 5566664 3577774 578889999999988764
No 396
>3la6_A Tyrosine-protein kinase WZC; P-loop protein, nucleotide binding domain, walker A motif, B protein kinase, oligomerization; HET: ADP; 3.20A {Escherichia coli}
Probab=24.46 E-value=1e+02 Score=27.93 Aligned_cols=41 Identities=7% Similarity=0.068 Sum_probs=30.1
Q ss_pred CCCceEEEEeeccccccccC--cHHHHHhHHHHHHHHCCCeEEEEeecC
Q 011163 6 RNGFHIIHICTEMDPLVSIG--SLASYVTGLSGALQRKGHLVEVILPKY 52 (492)
Q Consensus 6 ~~~mkIl~v~~~~~p~~~~G--G~~~~~~~l~~~L~~~Gh~V~vi~~~~ 52 (492)
+.+.|++.|+.. .| |-.+.+.+||..|++.|.+|.+|-.+.
T Consensus 89 ~~~~kvI~vts~------kgG~GKTtva~nLA~~lA~~G~rVLLID~D~ 131 (286)
T 3la6_A 89 QAQNNVLMMTGV------SPSIGMTFVCANLAAVISQTNKRVLLIDCDM 131 (286)
T ss_dssp TTTCCEEEEEES------SSSSSHHHHHHHHHHHHHTTTCCEEEEECCT
T ss_pred CCCCeEEEEECC------CCCCcHHHHHHHHHHHHHhCCCCEEEEeccC
Confidence 345677777762 24 455667889999999999999996543
No 397
>3m1a_A Putative dehydrogenase; short, PSI, MCSG, structural genomics, midwest center for structural genomics, protein structure initiative; 2.00A {Streptomyces avermitilis}
Probab=24.36 E-value=65 Score=28.91 Aligned_cols=34 Identities=9% Similarity=0.071 Sum_probs=24.9
Q ss_pred ceEEEEeeccccccccCcHHHHHhHHHHHHHHCCCeEEEEeec
Q 011163 9 FHIIHICTEMDPLVSIGSLASYVTGLSGALQRKGHLVEVILPK 51 (492)
Q Consensus 9 mkIl~v~~~~~p~~~~GG~~~~~~~l~~~L~~~Gh~V~vi~~~ 51 (492)
+|+++||- ..||+|. .+++.|.++|++|.++...
T Consensus 5 ~k~vlVTG------as~gIG~---~~a~~l~~~G~~V~~~~r~ 38 (281)
T 3m1a_A 5 AKVWLVTG------ASSGFGR---AIAEAAVAAGDTVIGTARR 38 (281)
T ss_dssp CCEEEETT------TTSHHHH---HHHHHHHHTTCEEEEEESS
T ss_pred CcEEEEEC------CCChHHH---HHHHHHHHCCCEEEEEeCC
Confidence 46667664 3477775 6788999999999877653
No 398
>1uan_A Hypothetical protein TT1542; rossmann-like, structural genomics, riken structural genomics/proteomics initiative, RSGI, unknown function; 2.00A {Thermus thermophilus} SCOP: c.134.1.1
Probab=24.35 E-value=1.1e+02 Score=26.58 Aligned_cols=40 Identities=8% Similarity=0.006 Sum_probs=27.1
Q ss_pred ceEEEEeeccccccccCcHHHHHhHHHHHHHHCCCeEEEEeecCCC
Q 011163 9 FHIIHICTEMDPLVSIGSLASYVTGLSGALQRKGHLVEVILPKYAC 54 (492)
Q Consensus 9 mkIl~v~~~~~p~~~~GG~~~~~~~l~~~L~~~Gh~V~vi~~~~~~ 54 (492)
|+||+|++ +|-. ....+..+...+.+.|++|.+++...+.
T Consensus 2 ~~vL~v~a--HPDD----e~l~~ggtia~~~~~G~~v~vv~lT~G~ 41 (227)
T 1uan_A 2 LDLLVVAP--HPDD----GELGCGGTLARAKAEGLSTGILDLTRGE 41 (227)
T ss_dssp EEEEEEES--STTH----HHHHHHHHHHHHHHTTCCEEEEEEECCT
T ss_pred ceEEEEEe--CCCc----HHHhHHHHHHHHHhCCCcEEEEEEcCCC
Confidence 68999998 5632 3333444555567899999999876554
No 399
>3ez2_A Plasmid partition protein A; type IA, DNA binding, winged-HTH, DNA bindin; HET: ADP EPE; 2.05A {Escherichia coli} PDB: 3ez6_A* 3ez7_A
Probab=24.21 E-value=68 Score=30.69 Aligned_cols=40 Identities=18% Similarity=0.148 Sum_probs=28.3
Q ss_pred CCCceEEEEeeccccccccCcHHHH--HhHHHHHHH------HCCCeEEEEeec
Q 011163 6 RNGFHIIHICTEMDPLVSIGSLASY--VTGLSGALQ------RKGHLVEVILPK 51 (492)
Q Consensus 6 ~~~mkIl~v~~~~~p~~~~GG~~~~--~~~l~~~L~------~~Gh~V~vi~~~ 51 (492)
.+.|||+.|+. ..||+|+. +.+|+..|+ ++|.+|.++=.+
T Consensus 105 ~~~~~vIav~s------~KGGvGKTT~a~nLA~~La~~~~~~~~g~rVlliD~D 152 (398)
T 3ez2_A 105 YSEAYVIFISN------LKGGVSKTVSTVSLAHAMRAHPHLLMEDLRILVIDLD 152 (398)
T ss_dssp CCSCEEEEECC------SSSSSSHHHHHHHHHHHHHHCTTTGGGCCCEEEEEEC
T ss_pred CCCCeEEEEEe------CCCCccHHHHHHHHHHHHHhcchhhcCCCeEEEEeCC
Confidence 34578777775 24777764 567888898 479999888654
No 400
>3rkr_A Short chain oxidoreductase; rossmann fold; HET: NAP; 2.42A {Uncultured bacterium BIO5}
Probab=24.13 E-value=76 Score=28.16 Aligned_cols=32 Identities=9% Similarity=0.143 Sum_probs=23.3
Q ss_pred eEEEEeeccccccccCcHHHHHhHHHHHHHHCCCeEEEEee
Q 011163 10 HIIHICTEMDPLVSIGSLASYVTGLSGALQRKGHLVEVILP 50 (492)
Q Consensus 10 kIl~v~~~~~p~~~~GG~~~~~~~l~~~L~~~Gh~V~vi~~ 50 (492)
|+++|+- ..||+| ..+++.|.++|++|.++..
T Consensus 30 k~vlITG------as~gIG---~~la~~l~~~G~~V~~~~r 61 (262)
T 3rkr_A 30 QVAVVTG------ASRGIG---AAIARKLGSLGARVVLTAR 61 (262)
T ss_dssp CEEEESS------TTSHHH---HHHHHHHHHTTCEEEEEES
T ss_pred CEEEEEC------CCChHH---HHHHHHHHHCCCEEEEEEC
Confidence 5666663 346666 5678899999999887764
No 401
>1zco_A 2-dehydro-3-deoxyphosphoheptonate aldolase; arabino-heptulosonate, synthase, shikimate, DAHP, DAH7P, DAH DAH7PS, lyase; HET: PEP; 2.25A {Pyrococcus furiosus}
Probab=24.03 E-value=3.8e+02 Score=23.81 Aligned_cols=95 Identities=18% Similarity=0.060 Sum_probs=59.5
Q ss_pred ccccCHHHHHHHHHHHhHcCcEEEEEecCC-----------ChhHHHHHHHHHHHhCCCeEEEEeccCHHHHHHHHhcCC
Q 011163 317 VSDVFLENLKAVVRGAKMRGIQFVFTGTNK-----------LPSASRALVSFQEELKDGIVIFVDSYDDALLHLIFSGSD 385 (492)
Q Consensus 317 ~~~Kg~~~li~a~~~l~~~~~~lvivG~g~-----------~~~~~~~l~~~~~~~~~~~v~~~~~~~~~~~~~~~~~ad 385 (492)
+.....+..++.++.+.+.++.++..+.-. ..+.-..+++..++.+ --.+...++......+...+|
T Consensus 31 c~~~~~e~a~~~a~~l~~~Ga~~vk~~~fkprts~~~~~g~~~egl~~l~~~~~~~G--l~~~te~~d~~~~~~l~~~vd 108 (262)
T 1zco_A 31 CSIESREQIMKVAEFLAEVGIKVLRGGAFKPRTSPYSFQGYGEKALRWMREAADEYG--LVTVTEVMDTRHVELVAKYSD 108 (262)
T ss_dssp SBCCCHHHHHHHHHHHHHTTCCEEECBSSCCCSSTTSCCCCTHHHHHHHHHHHHHHT--CEEEEECCCGGGHHHHHHHCS
T ss_pred CCCCCHHHHHHHHHHHHHcCCCEEEEEecccCCCcccccCccHHHHHHHHHHHHHcC--CcEEEeeCCHHhHHHHHhhCC
Confidence 455557778888887776666666655211 0222345666666663 333445666665555544589
Q ss_pred EEEECCC-CCCCchHHHHHhhcCCceEEEe
Q 011163 386 IILCHSF-HDPLLQVPLKALKYGAAPIAVT 414 (492)
Q Consensus 386 i~v~pS~-~E~~glv~lEAma~G~PvV~~~ 414 (492)
++-.+|. .+.+.+ +-|+...|+||+.++
T Consensus 109 ~~kIga~~~~n~~l-l~~~a~~~kPV~lk~ 137 (262)
T 1zco_A 109 ILQIGARNSQNFEL-LKEVGKVENPVLLKR 137 (262)
T ss_dssp EEEECGGGTTCHHH-HHHHTTSSSCEEEEC
T ss_pred EEEECcccccCHHH-HHHHHhcCCcEEEec
Confidence 9999998 677553 334455899999986
No 402
>2x6t_A ADP-L-glycero-D-manno-heptose-6-epimerase; isomerase, carbohydrate metabolism, stress response; HET: NAP ADP BMA; 2.36A {Escherichia coli} PDB: 2x86_A*
Probab=24.02 E-value=57 Score=30.46 Aligned_cols=25 Identities=24% Similarity=0.282 Sum_probs=18.8
Q ss_pred cCcHHHHHhHHHHHHHHCC-CeEEEEeec
Q 011163 24 IGSLASYVTGLSGALQRKG-HLVEVILPK 51 (492)
Q Consensus 24 ~GG~~~~~~~l~~~L~~~G-h~V~vi~~~ 51 (492)
.|++| ..+++.|.++| ++|.++...
T Consensus 55 tG~iG---~~l~~~L~~~g~~~V~~~~r~ 80 (357)
T 2x6t_A 55 AGFIG---SNIVKALNDKGITDILVVDNL 80 (357)
T ss_dssp TSHHH---HHHHHHHHHTTCCCEEEEECC
T ss_pred CcHHH---HHHHHHHHHCCCcEEEEEecC
Confidence 35555 56778899999 999888654
No 403
>3llv_A Exopolyphosphatase-related protein; NAD(P)-binding, rossmann, PSI, M structural genomics; 1.70A {Archaeoglobus fulgidus}
Probab=23.90 E-value=45 Score=26.25 Aligned_cols=24 Identities=21% Similarity=0.163 Sum_probs=19.0
Q ss_pred HHHHhHHHHHHHHCCCeEEEEeec
Q 011163 28 ASYVTGLSGALQRKGHLVEVILPK 51 (492)
Q Consensus 28 ~~~~~~l~~~L~~~Gh~V~vi~~~ 51 (492)
|..-..+++.|.++|++|.++..+
T Consensus 15 G~iG~~la~~L~~~g~~V~~id~~ 38 (141)
T 3llv_A 15 EAAGVGLVRELTAAGKKVLAVDKS 38 (141)
T ss_dssp SHHHHHHHHHHHHTTCCEEEEESC
T ss_pred CHHHHHHHHHHHHCCCeEEEEECC
Confidence 445567889999999999988753
No 404
>1kjq_A GART 2, phosphoribosylglycinamide formyltransferase 2, 5'-; ATP-grAsp, purine biosynthesis, nucleotide; HET: ADP MPO; 1.05A {Escherichia coli} SCOP: b.84.2.1 c.30.1.1 d.142.1.2 PDB: 1kj9_A* 1kji_A* 1kjj_A* 1kj8_A* 1eyz_A* 1ez1_A*
Probab=23.75 E-value=95 Score=29.39 Aligned_cols=34 Identities=15% Similarity=0.084 Sum_probs=25.3
Q ss_pred CCceEEEEeeccccccccCcHHHHHhHHHHHHHHCCCeEEEEeec
Q 011163 7 NGFHIIHICTEMDPLVSIGSLASYVTGLSGALQRKGHLVEVILPK 51 (492)
Q Consensus 7 ~~mkIl~v~~~~~p~~~~GG~~~~~~~l~~~L~~~Gh~V~vi~~~ 51 (492)
+.|||+++.. | ....++++++.++|++|.++.+.
T Consensus 10 ~~~~ili~g~--------g---~~~~~~~~a~~~~G~~v~~~~~~ 43 (391)
T 1kjq_A 10 AATRVMLLGS--------G---ELGKEVAIECQRLGVEVIAVDRY 43 (391)
T ss_dssp TCCEEEEESC--------S---HHHHHHHHHHHTTTCEEEEEESS
T ss_pred CCCEEEEECC--------C---HHHHHHHHHHHHcCCEEEEEECC
Confidence 4579988753 2 23467899999999999888754
No 405
>1mvo_A PHOP response regulator; phosphate regulon, transcriptional regulatory protein, alpha/beta doubly wound fold, phosphorylation; 1.60A {Bacillus subtilis} SCOP: c.23.1.1
Probab=23.73 E-value=2.3e+02 Score=21.18 Aligned_cols=112 Identities=12% Similarity=-0.007 Sum_probs=60.7
Q ss_pred cEEEEEecCCChhHHHHHHHHHHHhCCCeEEEEeccCHHHHHHHH--hcCCEEEECCC-CCCCchHHHHHhh---cCCce
Q 011163 337 IQFVFTGTNKLPSASRALVSFQEELKDGIVIFVDSYDDALLHLIF--SGSDIILCHSF-HDPLLQVPLKALK---YGAAP 410 (492)
Q Consensus 337 ~~lvivG~g~~~~~~~~l~~~~~~~~~~~v~~~~~~~~~~~~~~~--~~adi~v~pS~-~E~~glv~lEAma---~G~Pv 410 (492)
.+++|+.+. +...+.++......+ -.+.. ..+.++....+ ...|++++=.. .+.-|+.+++.+. ..+|+
T Consensus 4 ~~ilivdd~--~~~~~~l~~~L~~~g-~~v~~--~~~~~~a~~~~~~~~~dlvl~D~~l~~~~g~~~~~~l~~~~~~~~i 78 (136)
T 1mvo_A 4 KKILVVDDE--ESIVTLLQYNLERSG-YDVIT--ASDGEEALKKAETEKPDLIVLDVMLPKLDGIEVCKQLRQQKLMFPI 78 (136)
T ss_dssp CEEEEECSC--HHHHHHHHHHHHHTT-CEEEE--ESSHHHHHHHHHHHCCSEEEEESSCSSSCHHHHHHHHHHTTCCCCE
T ss_pred CEEEEEECC--HHHHHHHHHHHHHCC-cEEEE--ecCHHHHHHHHhhcCCCEEEEecCCCCCCHHHHHHHHHcCCCCCCE
Confidence 466777632 344555665555542 33432 22322222222 24688776543 2345666666553 45677
Q ss_pred EEEecCCCcccccccccccccceeeeeecCCCHHHHHHHHHHHhcC
Q 011163 411 IAVTSSDIEFRHFAEFDHESTRFSRFISSTFGNISLSQALEEIKNN 456 (492)
Q Consensus 411 V~~~~~~gg~~e~v~~~~~~~g~~G~~~~~~~~~~l~~ai~~~~~~ 456 (492)
|+... .+-.+..... ...|..+|+..|.+.+.|..++..++..
T Consensus 79 i~~s~--~~~~~~~~~~-~~~g~~~~l~KP~~~~~l~~~i~~~~~~ 121 (136)
T 1mvo_A 79 LMLTA--KDEEFDKVLG-LELGADDYMTKPFSPREVNARVKAILRR 121 (136)
T ss_dssp EEEEC--TTCCCCHHHH-HHTTCCEEEESSCCHHHHHHHHHHHHHT
T ss_pred EEEEC--CCCHHHHHHH-HhCCCCEEEECCCCHHHHHHHHHHHHHh
Confidence 76543 2222221110 1145678999999999999999987653
No 406
>1spx_A Short-chain reductase family member (5L265); parallel beta-sheet of seven strands in the order 3214567; 2.10A {Caenorhabditis elegans} SCOP: c.2.1.2
Probab=23.62 E-value=73 Score=28.47 Aligned_cols=32 Identities=16% Similarity=0.159 Sum_probs=23.3
Q ss_pred eEEEEeeccccccccCcHHHHHhHHHHHHHHCCCeEEEEee
Q 011163 10 HIIHICTEMDPLVSIGSLASYVTGLSGALQRKGHLVEVILP 50 (492)
Q Consensus 10 kIl~v~~~~~p~~~~GG~~~~~~~l~~~L~~~Gh~V~vi~~ 50 (492)
|.++||- ..||+|. .+++.|.++|++|.++..
T Consensus 7 k~vlVTG------as~gIG~---~ia~~l~~~G~~V~~~~r 38 (278)
T 1spx_A 7 KVAIITG------SSNGIGR---ATAVLFAREGAKVTITGR 38 (278)
T ss_dssp CEEEETT------TTSHHHH---HHHHHHHHTTCEEEEEES
T ss_pred CEEEEeC------CCchHHH---HHHHHHHHCCCEEEEEeC
Confidence 5556663 3467775 678889999999988764
No 407
>1qzu_A Hypothetical protein MDS018; alpha-beta sandwich, lyase; HET: FMN; 2.91A {Homo sapiens} SCOP: c.34.1.1
Probab=23.51 E-value=57 Score=28.18 Aligned_cols=37 Identities=30% Similarity=0.332 Sum_probs=25.1
Q ss_pred CCceEEEEeeccccccccCcH-HHHHhHHHHHHHH-CCCeEEEEeec
Q 011163 7 NGFHIIHICTEMDPLVSIGSL-ASYVTGLSGALQR-KGHLVEVILPK 51 (492)
Q Consensus 7 ~~mkIl~v~~~~~p~~~~GG~-~~~~~~l~~~L~~-~Gh~V~vi~~~ 51 (492)
+++||++..+ ||. .....++.+.|.+ .|++|.|+...
T Consensus 18 ~~k~IllgvT--------Gsiaa~k~~~lv~~L~~~~g~~V~vv~T~ 56 (206)
T 1qzu_A 18 RKFHVLVGVT--------GSVAALKLPLLVSKLLDIPGLEVAVVTTE 56 (206)
T ss_dssp SSEEEEEEEC--------SSGGGGTHHHHHHHHC---CEEEEEEECT
T ss_pred CCCEEEEEEe--------ChHHHHHHHHHHHHHhcccCCEEEEEECH
Confidence 3467877665 333 2345789999999 89999999754
No 408
>3un1_A Probable oxidoreductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.45A {Sinorhizobium meliloti}
Probab=23.50 E-value=52 Score=29.32 Aligned_cols=34 Identities=15% Similarity=0.166 Sum_probs=25.4
Q ss_pred ceEEEEeeccccccccCcHHHHHhHHHHHHHHCCCeEEEEeec
Q 011163 9 FHIIHICTEMDPLVSIGSLASYVTGLSGALQRKGHLVEVILPK 51 (492)
Q Consensus 9 mkIl~v~~~~~p~~~~GG~~~~~~~l~~~L~~~Gh~V~vi~~~ 51 (492)
.|+++||- ..||+|. .+++.|.++|++|.++...
T Consensus 28 ~k~vlVTG------as~gIG~---aia~~l~~~G~~V~~~~r~ 61 (260)
T 3un1_A 28 QKVVVITG------ASQGIGA---GLVRAYRDRNYRVVATSRS 61 (260)
T ss_dssp CCEEEESS------CSSHHHH---HHHHHHHHTTCEEEEEESS
T ss_pred CCEEEEeC------CCCHHHH---HHHHHHHHCCCEEEEEeCC
Confidence 36667764 3577774 7888999999999888754
No 409
>4huj_A Uncharacterized protein; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium, dinucleotide-binding; 1.77A {Sinorhizobium meliloti}
Probab=23.49 E-value=68 Score=27.75 Aligned_cols=31 Identities=6% Similarity=-0.122 Sum_probs=22.7
Q ss_pred CceEEEEeeccccccccCcHHHHHhHHHHHHHHCCCeEEEEe
Q 011163 8 GFHIIHICTEMDPLVSIGSLASYVTGLSGALQRKGHLVEVIL 49 (492)
Q Consensus 8 ~mkIl~v~~~~~p~~~~GG~~~~~~~l~~~L~~~Gh~V~vi~ 49 (492)
.|||++|.. |..-..++..|.+.||+|.++.
T Consensus 23 mmkI~IIG~-----------G~mG~~la~~l~~~g~~V~~v~ 53 (220)
T 4huj_A 23 MTTYAIIGA-----------GAIGSALAERFTAAQIPAIIAN 53 (220)
T ss_dssp SCCEEEEEC-----------HHHHHHHHHHHHHTTCCEEEEC
T ss_pred CCEEEEECC-----------CHHHHHHHHHHHhCCCEEEEEE
Confidence 378888653 3444568888999999998844
No 410
>3c24_A Putative oxidoreductase; YP_511008.1, structural genomics, center for structural genomics, JCSG, protein structure INI PSI-2; HET: MSE; 1.62A {Jannaschia SP}
Probab=23.41 E-value=81 Score=28.48 Aligned_cols=33 Identities=6% Similarity=0.007 Sum_probs=23.2
Q ss_pred CceEEEEeeccccccccCcHHHHHhHHHHHHHHCCCeEEEEee
Q 011163 8 GFHIIHICTEMDPLVSIGSLASYVTGLSGALQRKGHLVEVILP 50 (492)
Q Consensus 8 ~mkIl~v~~~~~p~~~~GG~~~~~~~l~~~L~~~Gh~V~vi~~ 50 (492)
.|||++|.. .|..-..++..|.+.||+|.++.+
T Consensus 11 mm~I~iIG~----------tG~mG~~la~~l~~~g~~V~~~~r 43 (286)
T 3c24_A 11 PKTVAILGA----------GGKMGARITRKIHDSAHHLAAIEI 43 (286)
T ss_dssp CCEEEEETT----------TSHHHHHHHHHHHHSSSEEEEECC
T ss_pred CCEEEEECC----------CCHHHHHHHHHHHhCCCEEEEEEC
Confidence 368877532 145556778889999999987654
No 411
>3lxy_A 4-hydroxythreonine-4-phosphate dehydrogenase; PDXA, NAD-DEPE dehydrogenase, metal-binding, NAD, NADP, oxidoreductase, PY biosynthesis; HET: SUC; 1.70A {Yersinia pestis} SCOP: c.77.1.3 PDB: 1ps6_A* 1ptm_A 1ps7_A 1r8k_A
Probab=23.29 E-value=2.6e+02 Score=26.07 Aligned_cols=77 Identities=14% Similarity=0.067 Sum_probs=44.9
Q ss_pred EEEEeccCHHHH--HHHHhcCCEEEECCCCCCCchHHHHHhhcCCceEEEecCCCccccc---ccccccccceeeeee--
Q 011163 366 VIFVDSYDDALL--HLIFSGSDIILCHSFHDPLLQVPLKALKYGAAPIAVTSSDIEFRHF---AEFDHESTRFSRFIS-- 438 (492)
Q Consensus 366 v~~~~~~~~~~~--~~~~~~adi~v~pS~~E~~glv~lEAma~G~PvV~~~~~~gg~~e~---v~~~~~~~g~~G~~~-- 438 (492)
+...|.++.|.+ ...+..+|++|.+.. -.|+..+..+.++.-|-+| .|++=+ ++|+ +.|=.
T Consensus 242 i~~~GP~paDt~F~~~~~~~~D~vlaMYH--DQGlip~K~l~F~~gVNvT----lGLP~iRTS~DHG------TAfDIAG 309 (334)
T 3lxy_A 242 INLIGPLPADTLFQPKYLQHADAVLAMYH--DQGLPVLKYQGFGRAVNIT----LGLPFIRTSVDHG------TALELAA 309 (334)
T ss_dssp CCEEEEECHHHHTSHHHHTTCSEEEESSH--HHHHHHHHHHHTTCCEEEE----ESSSSCEEEESSC------CCGGGTT
T ss_pred CceeCCCChHHhcChhhhccCCEEEEccc--chhhHhHHhcccCccEEEe----cCCCeeeecCCCC------cchhhcc
Confidence 334567766544 455688999998876 5678888888875533332 233322 2222 11211
Q ss_pred -cCCCHHHHHHHHHHHh
Q 011163 439 -STFGNISLSQALEEIK 454 (492)
Q Consensus 439 -~~~~~~~l~~ai~~~~ 454 (492)
.-.|+.+|.+||....
T Consensus 310 kG~A~~~S~~~Ai~~A~ 326 (334)
T 3lxy_A 310 TGTADVGSFITALNLAI 326 (334)
T ss_dssp TTCSCCHHHHHHHHHHH
T ss_pred CCCCChHHHHHHHHHHH
Confidence 1346779999988763
No 412
>2fz5_A Flavodoxin; alpha/beta doubly-wound topology, non-covalently bound FMN, electron transport; HET: FNR; NMR {Megasphaera elsdenii} SCOP: c.23.5.1
Probab=23.28 E-value=1.1e+02 Score=23.65 Aligned_cols=29 Identities=17% Similarity=0.243 Sum_probs=25.1
Q ss_pred ccCcHHHHHhHHHHHHHHCCCeEEEEeec
Q 011163 23 SIGSLASYVTGLSGALQRKGHLVEVILPK 51 (492)
Q Consensus 23 ~~GG~~~~~~~l~~~L~~~Gh~V~vi~~~ 51 (492)
..|-+..+...+++++.+.|++|.++...
T Consensus 9 ~tGnT~~~a~~i~~~l~~~g~~v~~~~~~ 37 (137)
T 2fz5_A 9 GTGNTEAMANEIEAAVKAAGADVESVRFE 37 (137)
T ss_dssp SSSHHHHHHHHHHHHHHHTTCCEEEEETT
T ss_pred CCChHHHHHHHHHHHHHhCCCeEEEEEcc
Confidence 35889999999999999999999988643
No 413
>1n2s_A DTDP-4-, DTDP-glucose oxidoreductase; rossman-fold, sugar-nucleotide-binding domain; HET: NAD; 2.00A {Salmonella enterica subsp} SCOP: c.2.1.2 PDB: 1kc1_A* 1kc3_A* 1kbz_A*
Probab=23.23 E-value=43 Score=30.29 Aligned_cols=32 Identities=13% Similarity=0.081 Sum_probs=21.2
Q ss_pred ceEEEEeeccccccccCcHHHHHhHHHHHHHHCCCeEEEEeec
Q 011163 9 FHIIHICTEMDPLVSIGSLASYVTGLSGALQRKGHLVEVILPK 51 (492)
Q Consensus 9 mkIl~v~~~~~p~~~~GG~~~~~~~l~~~L~~~Gh~V~vi~~~ 51 (492)
|||+++.. .|++| ..+++.|. +||+|.++...
T Consensus 1 m~ilVtGa-------tG~iG---~~l~~~L~-~g~~V~~~~r~ 32 (299)
T 1n2s_A 1 MNILLFGK-------TGQVG---WELQRSLA-PVGNLIALDVH 32 (299)
T ss_dssp CEEEEECT-------TSHHH---HHHHHHTT-TTSEEEEECTT
T ss_pred CeEEEECC-------CCHHH---HHHHHHhh-cCCeEEEeccc
Confidence 67765332 35555 55677788 79999887643
No 414
>3nrc_A Enoyl-[acyl-carrier-protein] reductase (NADH); rossmann fold, NADH BI oxidoreductase; HET: NAD TCL; 2.10A {Francisella tularensis subsp} PDB: 3uic_A* 2jjy_A*
Probab=23.20 E-value=66 Score=28.95 Aligned_cols=33 Identities=24% Similarity=0.317 Sum_probs=24.1
Q ss_pred eEEEEeecccccccc--CcHHHHHhHHHHHHHHCCCeEEEEeec
Q 011163 10 HIIHICTEMDPLVSI--GSLASYVTGLSGALQRKGHLVEVILPK 51 (492)
Q Consensus 10 kIl~v~~~~~p~~~~--GG~~~~~~~l~~~L~~~Gh~V~vi~~~ 51 (492)
|+++||- .. +|+| ..+++.|.++|++|.++...
T Consensus 27 k~vlVTG------asg~~GIG---~~ia~~l~~~G~~V~~~~r~ 61 (280)
T 3nrc_A 27 KKILITG------LLSNKSIA---YGIAKAMHREGAELAFTYVG 61 (280)
T ss_dssp CEEEECC------CCSTTCHH---HHHHHHHHHTTCEEEEEECT
T ss_pred CEEEEEC------CCCCCCHH---HHHHHHHHHcCCEEEEeeCc
Confidence 6667764 22 4577 56788999999998887754
No 415
>2gas_A Isoflavone reductase; NADPH-dependent reductase, oxidoreductase; 1.60A {Medicago sativa}
Probab=23.20 E-value=38 Score=30.78 Aligned_cols=25 Identities=16% Similarity=0.230 Sum_probs=19.3
Q ss_pred cCcHHHHHhHHHHHHHHCCCeEEEEeec
Q 011163 24 IGSLASYVTGLSGALQRKGHLVEVILPK 51 (492)
Q Consensus 24 ~GG~~~~~~~l~~~L~~~Gh~V~vi~~~ 51 (492)
+|++|. .++++|.+.||+|.+++..
T Consensus 11 tG~iG~---~l~~~L~~~g~~V~~~~R~ 35 (307)
T 2gas_A 11 TGAIGR---HIVWASIKAGNPTYALVRK 35 (307)
T ss_dssp TSTTHH---HHHHHHHHHTCCEEEEECC
T ss_pred CchHHH---HHHHHHHhCCCcEEEEECC
Confidence 477775 4677888899999988764
No 416
>3pxx_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, NAD, tuberculosis; HET: NAD; 2.00A {Mycobacterium avium} SCOP: c.2.1.0
Probab=23.18 E-value=87 Score=28.06 Aligned_cols=33 Identities=6% Similarity=0.013 Sum_probs=25.2
Q ss_pred eEEEEeeccccccccCcHHHHHhHHHHHHHHCCCeEEEEeec
Q 011163 10 HIIHICTEMDPLVSIGSLASYVTGLSGALQRKGHLVEVILPK 51 (492)
Q Consensus 10 kIl~v~~~~~p~~~~GG~~~~~~~l~~~L~~~Gh~V~vi~~~ 51 (492)
|+++||- ..||+| ..+++.|.++|++|.++...
T Consensus 11 k~vlVTG------as~gIG---~~ia~~l~~~G~~V~~~~~~ 43 (287)
T 3pxx_A 11 KVVLVTG------GARGQG---RSHAVKLAEEGADIILFDIC 43 (287)
T ss_dssp CEEEEET------TTSHHH---HHHHHHHHHTTCEEEEEECC
T ss_pred CEEEEeC------CCChHH---HHHHHHHHHCCCeEEEEccc
Confidence 6777774 357777 46889999999999887654
No 417
>3ono_A Ribose/galactose isomerase; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: MSE; 1.75A {Vibrio parahaemolyticus}
Probab=23.11 E-value=91 Score=27.01 Aligned_cols=40 Identities=18% Similarity=0.055 Sum_probs=28.4
Q ss_pred CCceEEEEeeccccccccCcHHHHHhHHHHHHHHCCCeEEEEee
Q 011163 7 NGFHIIHICTEMDPLVSIGSLASYVTGLSGALQRKGHLVEVILP 50 (492)
Q Consensus 7 ~~mkIl~v~~~~~p~~~~GG~~~~~~~l~~~L~~~Gh~V~vi~~ 50 (492)
+.|||++.++..++. =-+.....|...|.++||+|.=+.+
T Consensus 2 ~~MkIaigsDha~~l----K~~~i~~~l~~~L~~~G~eV~D~G~ 41 (214)
T 3ono_A 2 NAMKIALMMENSQAA----KNAMVAGELNSVAGGLGHDVFNVGM 41 (214)
T ss_dssp CCCEEEECCCGGGGG----GHHHHHHHHHHHHHHTTCEEEECSC
T ss_pred CccEEEEECCCcHHH----HChhHHHHHHHHHHHCCCEEEEcCC
Confidence 569999988754221 1234556788999999999977764
No 418
>1vpd_A Tartronate semialdehyde reductase; structural genomics, MCSG, protein structure initiative, PSI, midwest center for structural genomics; HET: MSE TLA; 1.65A {Salmonella typhimurium} SCOP: a.100.1.1 c.2.1.6
Probab=23.08 E-value=76 Score=28.76 Aligned_cols=32 Identities=19% Similarity=0.133 Sum_probs=22.5
Q ss_pred CceEEEEeeccccccccCcHHHHHhHHHHHHHHCCCeEEEEee
Q 011163 8 GFHIIHICTEMDPLVSIGSLASYVTGLSGALQRKGHLVEVILP 50 (492)
Q Consensus 8 ~mkIl~v~~~~~p~~~~GG~~~~~~~l~~~L~~~Gh~V~vi~~ 50 (492)
.|||++|.. |.++.. ++..|.+.||+|.++..
T Consensus 5 ~m~i~iiG~--------G~~G~~---~a~~l~~~g~~V~~~~~ 36 (299)
T 1vpd_A 5 TMKVGFIGL--------GIMGKP---MSKNLLKAGYSLVVSDR 36 (299)
T ss_dssp -CEEEEECC--------STTHHH---HHHHHHHTTCEEEEECS
T ss_pred cceEEEECc--------hHHHHH---HHHHHHhCCCEEEEEeC
Confidence 379998764 555543 56778889999877653
No 419
>3sc6_A DTDP-4-dehydrorhamnose reductase; RFBD, structural genomics, infectious diseases, bacillus anthracis STR. AMES, rhamnose biosynthetic pathway; HET: NAP; 2.65A {Bacillus anthracis} SCOP: c.2.1.0
Probab=23.04 E-value=35 Score=30.77 Aligned_cols=33 Identities=18% Similarity=0.076 Sum_probs=23.1
Q ss_pred ceEEEEeeccccccccCcHHHHHhHHHHHHHHCCCeEEEEeec
Q 011163 9 FHIIHICTEMDPLVSIGSLASYVTGLSGALQRKGHLVEVILPK 51 (492)
Q Consensus 9 mkIl~v~~~~~p~~~~GG~~~~~~~l~~~L~~~Gh~V~vi~~~ 51 (492)
|||+++. ..|++| ..+++.|.++||+|.++...
T Consensus 6 m~ilVtG-------atG~iG---~~l~~~L~~~g~~V~~~~r~ 38 (287)
T 3sc6_A 6 ERVIITG-------ANGQLG---KQLQEELNPEEYDIYPFDKK 38 (287)
T ss_dssp EEEEEES-------TTSHHH---HHHHHHSCTTTEEEEEECTT
T ss_pred eEEEEEC-------CCCHHH---HHHHHHHHhCCCEEEEeccc
Confidence 5776532 235555 56778899999999988763
No 420
>1oth_A Protein (ornithine transcarbamoylase); transferase; HET: PAO; 1.85A {Homo sapiens} SCOP: c.78.1.1 c.78.1.1 PDB: 1ep9_A 1fvo_A 1c9y_A* 1fb5_A
Probab=22.97 E-value=2.9e+02 Score=25.54 Aligned_cols=101 Identities=12% Similarity=0.117 Sum_probs=0.0
Q ss_pred ecCCCCCCCcCCCCCcccccccCccCccChHHHHHHHHHHhCCCCCCCceEEEEEeccccccCHHHHHHHHHHHhHcCcE
Q 011163 259 APCGFDSSTWDPSNDKFLTENYCAEDMKGKTVCKVTLQQQLGLSKDASTIVVGCIFSDVSDVFLENLKAVVRGAKMRGIQ 338 (492)
Q Consensus 259 I~nGvd~~~f~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~lg~~~~~~~~~i~~~grl~~~Kg~~~li~a~~~l~~~~~~ 338 (492)
|-||-+ +..+|. ..-.+--.+++++|--.+ ..+.++|-...- ...++.++..+ +++
T Consensus 126 VINa~~-~~~HPt---------------QaLaDl~Ti~e~~g~l~g---l~va~vGD~~~v--a~Sl~~~~~~~---G~~ 181 (321)
T 1oth_A 126 IINGLS-DLYHPI---------------QILADYLTLQEHYSSLKG---LTLSWIGDGNNI--LHSIMMSAAKF---GMH 181 (321)
T ss_dssp EEESCC-SSCCHH---------------HHHHHHHHHHHHHSCCTT---CEEEEESCSSHH--HHHHHTTTGGG---TCE
T ss_pred EEcCCC-CCCCcH---------------HHHHHHHHHHHHhCCcCC---cEEEEECCchhh--HHHHHHHHHHc---CCe
Q ss_pred EEEEecCC---ChhHHHHHHHHHHHhCCCeEEEEeccCHHHHHHHHhcCCEEEE
Q 011163 339 FVFTGTNK---LPSASRALVSFQEELKDGIVIFVDSYDDALLHLIFSGSDIILC 389 (492)
Q Consensus 339 lvivG~g~---~~~~~~~l~~~~~~~~~~~v~~~~~~~~~~~~~~~~~adi~v~ 389 (492)
+.+++..+ .++..+.+++.+++.+ ..+... +...+.+..||++..
T Consensus 182 v~~~~P~~~~~~~~~~~~~~~~a~~~G-~~~~~~-----~d~~eav~~aDvvy~ 229 (321)
T 1oth_A 182 LQAATPKGYEPDASVTKLAEQYAKENG-TKLLLT-----NDPLEAAHGGNVLIT 229 (321)
T ss_dssp EEEECCTTCCCCHHHHHHHHHHHHHHT-CCEEEE-----SCHHHHHTTCSEEEE
T ss_pred EEEECCccccCCHHHHHHHHHHHHHcC-CeEEEE-----ECHHHHhccCCEEEE
No 421
>1vkr_A Mannitol-specific PTS system enzyme iiabc compone; phosphotransferase, transferase, kinase, sugar transport; NMR {Escherichia coli} SCOP: c.44.2.1 PDB: 1vrv_A* 2few_B*
Probab=22.96 E-value=97 Score=24.21 Aligned_cols=39 Identities=18% Similarity=0.209 Sum_probs=24.8
Q ss_pred CCceEEEEeeccccccccCcHHHH-HhHHHHHHHHCCC-eEEEEeec
Q 011163 7 NGFHIIHICTEMDPLVSIGSLASY-VTGLSGALQRKGH-LVEVILPK 51 (492)
Q Consensus 7 ~~mkIl~v~~~~~p~~~~GG~~~~-~~~l~~~L~~~Gh-~V~vi~~~ 51 (492)
+.+||+++|.. .. |.... ...+-+.+.+.|. ++.+-...
T Consensus 12 ~~kkIlvVC~s-----Gm-gTS~ml~~klkk~~~e~gi~~~~V~~~~ 52 (125)
T 1vkr_A 12 HVRKIIVACDA-----GM-GSSAMGAGVLRKKIQDAGLSQISVTNSA 52 (125)
T ss_dssp CCCEEEECCSS-----SS-HHHHHHHHHHHHHHHHTTCTTSEEEECC
T ss_pred cccEEEEECCC-----cH-HHHHHHHHHHHHHHHHCCCceEEEEEee
Confidence 34689998862 11 33333 3567778888998 77665543
No 422
>1sb8_A WBPP; epimerase, 4-epimerase, UDP-galnac, UDP-GLCNAC, SDR, G SYK, UDP, N-acetylglucosamine, N- acetylgalactosamine, UDP-GLC, isomerase; HET: NAD UD2; 2.10A {Pseudomonas aeruginosa} SCOP: c.2.1.2 PDB: 1sb9_A*
Probab=22.94 E-value=80 Score=29.35 Aligned_cols=25 Identities=16% Similarity=0.068 Sum_probs=19.1
Q ss_pred cCcHHHHHhHHHHHHHHCCCeEEEEeec
Q 011163 24 IGSLASYVTGLSGALQRKGHLVEVILPK 51 (492)
Q Consensus 24 ~GG~~~~~~~l~~~L~~~Gh~V~vi~~~ 51 (492)
.|++| ..+++.|.+.|++|.++...
T Consensus 36 tG~iG---~~l~~~L~~~g~~V~~~~r~ 60 (352)
T 1sb8_A 36 AGFIG---SNLLETLLKLDQKVVGLDNF 60 (352)
T ss_dssp TSHHH---HHHHHHHHHTTCEEEEEECC
T ss_pred CcHHH---HHHHHHHHHCCCEEEEEeCC
Confidence 35565 56778899999999988754
No 423
>2yy7_A L-threonine dehydrogenase; thermolabIle, flavobacterium FRIG KUC-1, oxidoreductase; HET: PE8 NAD MES; 2.06A {Flavobacterium frigidimaris}
Probab=22.90 E-value=50 Score=30.01 Aligned_cols=33 Identities=21% Similarity=0.172 Sum_probs=22.7
Q ss_pred ceEEEEeeccccccccCcHHHHHhHHHHHHHHC--CCeEEEEeec
Q 011163 9 FHIIHICTEMDPLVSIGSLASYVTGLSGALQRK--GHLVEVILPK 51 (492)
Q Consensus 9 mkIl~v~~~~~p~~~~GG~~~~~~~l~~~L~~~--Gh~V~vi~~~ 51 (492)
|+|+++. ..|++| ..+++.|.++ ||+|.++...
T Consensus 3 ~~vlVtG-------atG~iG---~~l~~~L~~~~~g~~V~~~~r~ 37 (312)
T 2yy7_A 3 PKILIIG-------ACGQIG---TELTQKLRKLYGTENVIASDIR 37 (312)
T ss_dssp CCEEEET-------TTSHHH---HHHHHHHHHHHCGGGEEEEESC
T ss_pred ceEEEEC-------CccHHH---HHHHHHHHHhCCCCEEEEEcCC
Confidence 6776532 235555 5667788888 8999988754
No 424
>3uf0_A Short-chain dehydrogenase/reductase SDR; gluconate, gluconate 5-dehydratase, NAD(P) dependent, enzyme initiative, EFI, oxidoreductase; HET: NAP; 2.00A {Beutenbergia cavernae} SCOP: c.2.1.0
Probab=22.83 E-value=98 Score=27.72 Aligned_cols=31 Identities=10% Similarity=0.058 Sum_probs=23.6
Q ss_pred eEEEEeeccccccccCcHHHHHhHHHHHHHHCCCeEEEEe
Q 011163 10 HIIHICTEMDPLVSIGSLASYVTGLSGALQRKGHLVEVIL 49 (492)
Q Consensus 10 kIl~v~~~~~p~~~~GG~~~~~~~l~~~L~~~Gh~V~vi~ 49 (492)
|+++||- ..||+| ..+++.|.++|++|.++.
T Consensus 32 k~~lVTG------as~GIG---~aia~~la~~G~~V~~~~ 62 (273)
T 3uf0_A 32 RTAVVTG------AGSGIG---RAIAHGYARAGAHVLAWG 62 (273)
T ss_dssp CEEEEET------TTSHHH---HHHHHHHHHTTCEEEEEE
T ss_pred CEEEEeC------CCcHHH---HHHHHHHHHCCCEEEEEc
Confidence 5667664 346777 468889999999998776
No 425
>3svl_A Protein YIEF; E. coli CHRR enzyme, chromate bioremediation, tetramer role, mutant enzymes, oxidoreductase; HET: FMN; 2.20A {Escherichia coli}
Probab=22.76 E-value=27 Score=29.85 Aligned_cols=39 Identities=10% Similarity=0.107 Sum_probs=21.7
Q ss_pred CCceEEEEeeccccccccCcHHHHHhHHHHHHHHCCCeEE-EEe
Q 011163 7 NGFHIIHICTEMDPLVSIGSLASYVTGLSGALQRKGHLVE-VIL 49 (492)
Q Consensus 7 ~~mkIl~v~~~~~p~~~~GG~~~~~~~l~~~L~~~Gh~V~-vi~ 49 (492)
++|||+.|+. .| ..++....+.+...++.+.|++|. ++-
T Consensus 3 ~~mkil~I~G--S~--r~~s~t~~l~~~~~~~~~~g~~v~~~id 42 (193)
T 3svl_A 3 EKLQVVTLLG--SL--RKGSFNGMVARTLPKIAPASMEVNALPS 42 (193)
T ss_dssp -CEEEEEEEC--CC--STTCHHHHHHHHGGGTSCTTEEEEECCC
T ss_pred CCCEEEEEEc--cC--CCCCHHHHHHHHHHHHccCCCEEEEEEe
Confidence 4599999997 34 335554433333333334577877 543
No 426
>2nm0_A Probable 3-oxacyl-(acyl-carrier-protein) reductas; oxidoreductase; 1.99A {Streptomyces coelicolor}
Probab=22.68 E-value=89 Score=27.60 Aligned_cols=34 Identities=9% Similarity=0.137 Sum_probs=24.6
Q ss_pred ceEEEEeeccccccccCcHHHHHhHHHHHHHHCCCeEEEEeec
Q 011163 9 FHIIHICTEMDPLVSIGSLASYVTGLSGALQRKGHLVEVILPK 51 (492)
Q Consensus 9 mkIl~v~~~~~p~~~~GG~~~~~~~l~~~L~~~Gh~V~vi~~~ 51 (492)
.|.++|+- ..||+|. .++++|.++|++|.++...
T Consensus 21 ~k~vlVTG------as~gIG~---aia~~l~~~G~~V~~~~r~ 54 (253)
T 2nm0_A 21 SRSVLVTG------GNRGIGL---AIARAFADAGDKVAITYRS 54 (253)
T ss_dssp CCEEEEET------TTSHHHH---HHHHHHHHTTCEEEEEESS
T ss_pred CCEEEEeC------CCCHHHH---HHHHHHHHCCCEEEEEeCC
Confidence 35666664 3577774 5788999999999887653
No 427
>4dll_A 2-hydroxy-3-oxopropionate reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, oxidoreductase; 2.11A {Polaromonas SP}
Probab=22.61 E-value=84 Score=29.05 Aligned_cols=33 Identities=21% Similarity=0.210 Sum_probs=24.3
Q ss_pred CCceEEEEeeccccccccCcHHHHHhHHHHHHHHCCCeEEEEee
Q 011163 7 NGFHIIHICTEMDPLVSIGSLASYVTGLSGALQRKGHLVEVILP 50 (492)
Q Consensus 7 ~~mkIl~v~~~~~p~~~~GG~~~~~~~l~~~L~~~Gh~V~vi~~ 50 (492)
+.|||++|.. |-+| ..++..|.+.||+|.++..
T Consensus 30 ~~~~I~iIG~--------G~mG---~~~a~~l~~~G~~V~~~dr 62 (320)
T 4dll_A 30 YARKITFLGT--------GSMG---LPMARRLCEAGYALQVWNR 62 (320)
T ss_dssp CCSEEEEECC--------TTTH---HHHHHHHHHTTCEEEEECS
T ss_pred CCCEEEEECc--------cHHH---HHHHHHHHhCCCeEEEEcC
Confidence 3479988764 5555 5577889999999988754
No 428
>3c1o_A Eugenol synthase; phenylpropene, PIP reductase, short-chain dehydrogenase/reductase, oxidoreductase; HET: NAP; 1.80A {Clarkia breweri}
Probab=22.55 E-value=46 Score=30.52 Aligned_cols=34 Identities=15% Similarity=-0.047 Sum_probs=24.2
Q ss_pred CceEEEEeeccccccccCcHHHHHhHHHHHHHHCCCeEEEEeec
Q 011163 8 GFHIIHICTEMDPLVSIGSLASYVTGLSGALQRKGHLVEVILPK 51 (492)
Q Consensus 8 ~mkIl~v~~~~~p~~~~GG~~~~~~~l~~~L~~~Gh~V~vi~~~ 51 (492)
.|+|+++. .+|++|. .++++|.++||+|.+++..
T Consensus 4 ~~~ilVtG-------atG~iG~---~l~~~L~~~g~~V~~~~R~ 37 (321)
T 3c1o_A 4 MEKIIIYG-------GTGYIGK---FMVRASLSFSHPTFIYARP 37 (321)
T ss_dssp CCCEEEET-------TTSTTHH---HHHHHHHHTTCCEEEEECC
T ss_pred ccEEEEEc-------CCchhHH---HHHHHHHhCCCcEEEEECC
Confidence 35676543 2477765 5677899999999998865
No 429
>3kto_A Response regulator receiver protein; PSI-II,structural genomics, protein structure initiative; 1.98A {Pseudoalteromonas atlantica T6C} SCOP: c.23.1.0
Probab=22.46 E-value=90 Score=23.89 Aligned_cols=111 Identities=14% Similarity=0.031 Sum_probs=59.1
Q ss_pred cEEEEEecCCChhHHHHHHHHHHHhCCCeEEEEeccCHHHHHHHHh--cCCEEEECCC-CC--CCchHHHHHhh---cCC
Q 011163 337 IQFVFTGTNKLPSASRALVSFQEELKDGIVIFVDSYDDALLHLIFS--GSDIILCHSF-HD--PLLQVPLKALK---YGA 408 (492)
Q Consensus 337 ~~lvivG~g~~~~~~~~l~~~~~~~~~~~v~~~~~~~~~~~~~~~~--~adi~v~pS~-~E--~~glv~lEAma---~G~ 408 (492)
.+++|+.+. +...+.++...+..+ -.|.. ..+.++....+. ..|++++-.. -+ .-|+.+++.+. ..+
T Consensus 7 ~~ilivdd~--~~~~~~l~~~L~~~g-~~v~~--~~~~~~a~~~l~~~~~dlvi~D~~l~~~~~~g~~~~~~l~~~~~~~ 81 (136)
T 3kto_A 7 PIIYLVDHQ--KDARAALSKLLSPLD-VTIQC--FASAESFMRQQISDDAIGMIIEAHLEDKKDSGIELLETLVKRGFHL 81 (136)
T ss_dssp CEEEEECSC--HHHHHHHHHHHTTSS-SEEEE--ESSHHHHTTSCCCTTEEEEEEETTGGGBTTHHHHHHHHHHHTTCCC
T ss_pred CeEEEEcCC--HHHHHHHHHHHHHCC-cEEEE--eCCHHHHHHHHhccCCCEEEEeCcCCCCCccHHHHHHHHHhCCCCC
Confidence 467777632 344455555544431 23332 223333222222 2466665433 33 45666666554 367
Q ss_pred ceEEEecCCCcccccccccccccceeeeeecCCCHHHHHHHHHHHhc
Q 011163 409 APIAVTSSDIEFRHFAEFDHESTRFSRFISSTFGNISLSQALEEIKN 455 (492)
Q Consensus 409 PvV~~~~~~gg~~e~v~~~~~~~g~~G~~~~~~~~~~l~~ai~~~~~ 455 (492)
|+|+... ..-.+.+... ...|..+|+..|.+.+.|.++|.+++.
T Consensus 82 ~ii~~s~--~~~~~~~~~~-~~~ga~~~l~KP~~~~~l~~~i~~~~~ 125 (136)
T 3kto_A 82 PTIVMAS--SSDIPTAVRA-MRASAADFIEKPFIEHVLVHDVQQIIN 125 (136)
T ss_dssp CEEEEES--SCCHHHHHHH-HHTTCSEEEESSBCHHHHHHHHHHHHH
T ss_pred CEEEEEc--CCCHHHHHHH-HHcChHHheeCCCCHHHHHHHHHHHHh
Confidence 7777654 2222222111 114567899999999999999998864
No 430
>2pl1_A Transcriptional regulatory protein PHOP; CHEY-like fold, response regulator, beryllium fluoride, transcription factor, activated, virulence; 1.90A {Escherichia coli} SCOP: c.23.1.1 PDB: 2pkx_A
Probab=22.43 E-value=2.3e+02 Score=20.61 Aligned_cols=109 Identities=9% Similarity=-0.039 Sum_probs=58.7
Q ss_pred EEEEEecCCChhHHHHHHHHHHHhCCCeEEEEeccCHHHHHHHHh--cCCEEEECCC-CCCCchHHHHHhh---cCCceE
Q 011163 338 QFVFTGTNKLPSASRALVSFQEELKDGIVIFVDSYDDALLHLIFS--GSDIILCHSF-HDPLLQVPLKALK---YGAAPI 411 (492)
Q Consensus 338 ~lvivG~g~~~~~~~~l~~~~~~~~~~~v~~~~~~~~~~~~~~~~--~adi~v~pS~-~E~~glv~lEAma---~G~PvV 411 (492)
+++|+.+ ++...+.++...+..+ -.+.. .-+.++....+. ..|++++=-. -+.-|+..++.+. ..+|+|
T Consensus 2 ~ilivdd--~~~~~~~l~~~l~~~g-~~v~~--~~~~~~a~~~~~~~~~dlil~D~~l~~~~g~~~~~~l~~~~~~~~ii 76 (121)
T 2pl1_A 2 RVLVVED--NALLRHHLKVQIQDAG-HQVDD--AEDAKEADYYLNEHIPDIAIVDLGLPDEDGLSLIRRWRSNDVSLPIL 76 (121)
T ss_dssp EEEEECS--CHHHHHHHHHHHHHTT-CEEEE--ESSHHHHHHHHHHSCCSEEEECSCCSSSCHHHHHHHHHHTTCCSCEE
T ss_pred eEEEEeC--cHHHHHHHHHHHhhcC-CEEEE--eCCHHHHHHHHhccCCCEEEEecCCCCCCHHHHHHHHHhcCCCCCEE
Confidence 4556653 2344555655555542 33332 223333223332 4688776433 2345666676654 356777
Q ss_pred EEecCCCcccccccccccccceeeeeecCCCHHHHHHHHHHHh
Q 011163 412 AVTSSDIEFRHFAEFDHESTRFSRFISSTFGNISLSQALEEIK 454 (492)
Q Consensus 412 ~~~~~~gg~~e~v~~~~~~~g~~G~~~~~~~~~~l~~ai~~~~ 454 (492)
+... .+-.+.... ....|..+|+..|.+.+.|..++..++
T Consensus 77 ~~s~--~~~~~~~~~-~~~~g~~~~l~kp~~~~~l~~~i~~~~ 116 (121)
T 2pl1_A 77 VLTA--RESWQDKVE-VLSAGADDYVTKPFHIEEVMARMQALM 116 (121)
T ss_dssp EEES--CCCHHHHHH-HHHTTCSEEEESSCCHHHHHHHHHHHH
T ss_pred EEec--CCCHHHHHH-HHHcCccceEECCCCHHHHHHHHHHHH
Confidence 6543 222222111 011456789999999999999988765
No 431
>3d7n_A Flavodoxin, WRBA-like protein; structural genomics, PSI, MCS protein structure initiative, midwest center for structural genomics; 2.30A {Agrobacterium tumefaciens}
Probab=22.43 E-value=33 Score=29.10 Aligned_cols=35 Identities=6% Similarity=0.112 Sum_probs=25.0
Q ss_pred CCCceEEEEeeccccccccCcHHHHHhHHHHHHHHCCCeE
Q 011163 6 RNGFHIIHICTEMDPLVSIGSLASYVTGLSGALQRKGHLV 45 (492)
Q Consensus 6 ~~~mkIl~v~~~~~p~~~~GG~~~~~~~l~~~L~~~Gh~V 45 (492)
++.|||++|.. .+ .|-+......+++++.+.|++|
T Consensus 4 ~~~~kiliiy~--S~---~GnT~~lA~~ia~~l~~~~~~v 38 (193)
T 3d7n_A 4 NSSSNTVVVYH--SG---YGHTHRMAEAVAEGAEATLHAI 38 (193)
T ss_dssp --CCCEEEEEC--CS---SSHHHHHHHHHHHHHTCEEEEC
T ss_pred CCCCEEEEEEE--CC---ChHHHHHHHHHHHHhhhcceEe
Confidence 34589998874 23 5888889999999987766554
No 432
>2o23_A HADH2 protein; HSD17B10, schad, ERAB, type II HADH, 2-methyl-3-hydroxybuTyr dehydrogenase, MHBD, structural genomics, structural genomi consortium; HET: NAD GOL; 1.20A {Homo sapiens} SCOP: c.2.1.2 PDB: 1so8_A 1u7t_A* 1e3s_A* 1e3w_B* 1e3w_A* 1e6w_A*
Probab=22.39 E-value=87 Score=27.58 Aligned_cols=33 Identities=12% Similarity=0.062 Sum_probs=24.0
Q ss_pred eEEEEeeccccccccCcHHHHHhHHHHHHHHCCCeEEEEeec
Q 011163 10 HIIHICTEMDPLVSIGSLASYVTGLSGALQRKGHLVEVILPK 51 (492)
Q Consensus 10 kIl~v~~~~~p~~~~GG~~~~~~~l~~~L~~~Gh~V~vi~~~ 51 (492)
|.++|+- ..||+| ..+++.|.++|++|.++...
T Consensus 13 k~vlVTG------asggiG---~~~a~~l~~~G~~V~~~~r~ 45 (265)
T 2o23_A 13 LVAVITG------GASGLG---LATAERLVGQGASAVLLDLP 45 (265)
T ss_dssp CEEEEET------TTSHHH---HHHHHHHHHTTCEEEEEECT
T ss_pred CEEEEEC------CCChHH---HHHHHHHHHCCCEEEEEeCC
Confidence 5556663 346666 57788999999999888654
No 433
>3q2o_A Phosphoribosylaminoimidazole carboxylase, ATPase; carboxylates, ATP binding, lyase; 1.96A {Bacillus anthracis} PDB: 3qff_A* 3r5h_A*
Probab=22.36 E-value=1.3e+02 Score=28.44 Aligned_cols=35 Identities=20% Similarity=0.063 Sum_probs=25.5
Q ss_pred CCCceEEEEeeccccccccCcHHHHHhHHHHHHHHCCCeEEEEeec
Q 011163 6 RNGFHIIHICTEMDPLVSIGSLASYVTGLSGALQRKGHLVEVILPK 51 (492)
Q Consensus 6 ~~~mkIl~v~~~~~p~~~~GG~~~~~~~l~~~L~~~Gh~V~vi~~~ 51 (492)
.+..+|+++.. |. ....+++++.++|++|.++.+.
T Consensus 12 ~~~k~IlIlG~---------G~--~g~~la~aa~~~G~~vi~~d~~ 46 (389)
T 3q2o_A 12 LPGKTIGIIGG---------GQ--LGRMMALAAKEMGYKIAVLDPT 46 (389)
T ss_dssp CTTSEEEEECC---------SH--HHHHHHHHHHHTTCEEEEEESS
T ss_pred CCCCEEEEECC---------CH--HHHHHHHHHHHcCCEEEEEeCC
Confidence 34457877653 32 4678889999999999999764
No 434
>1w6u_A 2,4-dienoyl-COA reductase, mitochondrial precursor; short chain dehydrogenase, beta- oxidation, NADP, oxidoreductase; HET: HXC NAP; 1.75A {Homo sapiens} SCOP: c.2.1.2 PDB: 1w73_A* 1w8d_A*
Probab=22.30 E-value=1.1e+02 Score=27.65 Aligned_cols=33 Identities=18% Similarity=0.207 Sum_probs=23.2
Q ss_pred eEEEEeeccccccccCcHHHHHhHHHHHHHHCCCeEEEEeec
Q 011163 10 HIIHICTEMDPLVSIGSLASYVTGLSGALQRKGHLVEVILPK 51 (492)
Q Consensus 10 kIl~v~~~~~p~~~~GG~~~~~~~l~~~L~~~Gh~V~vi~~~ 51 (492)
|.++|+- ..||+| ..+++.|.++|++|.++...
T Consensus 27 k~vlITG------asggiG---~~la~~L~~~G~~V~~~~r~ 59 (302)
T 1w6u_A 27 KVAFITG------GGTGLG---KGMTTLLSSLGAQCVIASRK 59 (302)
T ss_dssp CEEEEET------TTSHHH---HHHHHHHHHTTCEEEEEESC
T ss_pred CEEEEEC------CCchHH---HHHHHHHHHCCCEEEEEeCC
Confidence 4555553 346666 56788899999998887643
No 435
>1ehi_A LMDDL2, D-alanine:D-lactate ligase; ATP-binding. grAsp motif for ATP.; HET: ADP PHY; 2.38A {Leuconostoc mesenteroides} SCOP: c.30.1.2 d.142.1.1
Probab=22.18 E-value=52 Score=31.34 Aligned_cols=41 Identities=7% Similarity=-0.072 Sum_probs=27.1
Q ss_pred CceEEEEeeccccccccCcH-HHHHhHHHHHH-HHCCCeEEEEeec
Q 011163 8 GFHIIHICTEMDPLVSIGSL-ASYVTGLSGAL-QRKGHLVEVILPK 51 (492)
Q Consensus 8 ~mkIl~v~~~~~p~~~~GG~-~~~~~~l~~~L-~~~Gh~V~vi~~~ 51 (492)
+|||+++........ -+ -.....+.++| .+.||+|..+-..
T Consensus 3 k~~v~vl~gG~s~E~---~vSl~s~~~v~~al~~~~g~~v~~i~~~ 45 (377)
T 1ehi_A 3 KKRVALIFGGNSSEH---DVSKRSAQNFYNAIEATGKYEIIVFAIA 45 (377)
T ss_dssp CEEEEEEEECSSTTH---HHHHHHHHHHHHHHHHHSSEEEEEEEEC
T ss_pred CcEEEEEeCCCCCCc---ceeHHHHHHHHHHhCcccCcEEEEEEEc
Confidence 589999885321110 00 12356788999 9999999998654
No 436
>2qvg_A Two component response regulator; NYSGXRC, PSI-2, structural genomics, protein structure initiative; 1.50A {Legionella pneumophila subsp}
Probab=22.14 E-value=2.6e+02 Score=21.14 Aligned_cols=111 Identities=7% Similarity=-0.079 Sum_probs=63.8
Q ss_pred CcEEEEEecCCChhHHHHHHHHHHHhCC-CeEEEEeccCHHHHHHHHh--------cCCEEEECCC-CCCCchHHHHHhh
Q 011163 336 GIQFVFTGTNKLPSASRALVSFQEELKD-GIVIFVDSYDDALLHLIFS--------GSDIILCHSF-HDPLLQVPLKALK 405 (492)
Q Consensus 336 ~~~lvivG~g~~~~~~~~l~~~~~~~~~-~~v~~~~~~~~~~~~~~~~--------~adi~v~pS~-~E~~glv~lEAma 405 (492)
..+++|+.+ ++...+.+++..+..+. ..|... -+.++....+. ..|++++=.. .+.-|+-+++.+.
T Consensus 7 ~~~ILivdd--~~~~~~~l~~~L~~~g~~~~v~~~--~~~~~a~~~l~~~~~~~~~~~dlii~D~~l~~~~g~~~~~~l~ 82 (143)
T 2qvg_A 7 KVDILYLED--DEVDIQSVERVFHKISSLIKIEIA--KSGNQALDMLYGRNKENKIHPKLILLDINIPKMNGIEFLKELR 82 (143)
T ss_dssp CCSEEEECC--CHHHHHHHHHHHHHHCTTCCEEEE--SSHHHHHHHHHTCTTCCCCCCSEEEEETTCTTSCHHHHHHHHT
T ss_pred CCeEEEEeC--CHHHHHHHHHHHHHhCCCceEEEE--CCHHHHHHHHHhcccccCCCCCEEEEecCCCCCCHHHHHHHHH
Confidence 457777774 34556667666666531 145433 23333334443 4788877543 3445676777664
Q ss_pred -----cCCceEEEecCCCcccccccccccccceeeeeecCCCHHHHHHHHHHH
Q 011163 406 -----YGAAPIAVTSSDIEFRHFAEFDHESTRFSRFISSTFGNISLSQALEEI 453 (492)
Q Consensus 406 -----~G~PvV~~~~~~gg~~e~v~~~~~~~g~~G~~~~~~~~~~l~~ai~~~ 453 (492)
..+|+|+... ..-.+.+... ...|..+++..|.+.+.|.+++...
T Consensus 83 ~~~~~~~~~ii~ls~--~~~~~~~~~~-~~~g~~~~l~kP~~~~~L~~~~~~~ 132 (143)
T 2qvg_A 83 DDSSFTDIEVFVLTA--AYTSKDKLAF-ESLNIRGHLIKPLDYGEAIKLFWIL 132 (143)
T ss_dssp TSGGGTTCEEEEEES--CCCHHHHHHH-TTTTCCEEEESSCCHHHHHHHHHHH
T ss_pred cCccccCCcEEEEeC--CCCHHHHHHH-HhcCCCeEEECCCCHHHHHHHHHHH
Confidence 4677777654 2222222111 1246678999999999998886654
No 437
>1a04_A Nitrate/nitrite response regulator protein NARL; signal transduction protein, response regulators, two- component systems; 2.20A {Escherichia coli} SCOP: a.4.6.2 c.23.1.1 PDB: 1rnl_A
Probab=22.07 E-value=3.4e+02 Score=22.49 Aligned_cols=112 Identities=9% Similarity=0.002 Sum_probs=59.4
Q ss_pred cEEEEEecCCChhHHHHHHHHHHHhCCCeEEEEe-ccCHHHHHHHH--hcCCEEEECCC-CCCCchHHHHHhh---cCCc
Q 011163 337 IQFVFTGTNKLPSASRALVSFQEELKDGIVIFVD-SYDDALLHLIF--SGSDIILCHSF-HDPLLQVPLKALK---YGAA 409 (492)
Q Consensus 337 ~~lvivG~g~~~~~~~~l~~~~~~~~~~~v~~~~-~~~~~~~~~~~--~~adi~v~pS~-~E~~glv~lEAma---~G~P 409 (492)
.+++|+.+ ++...+.++...+.. ..+.... ..+.++....+ ...|++++=-. -+.-|+.+++.+. ..+|
T Consensus 6 ~~ilivdd--~~~~~~~l~~~L~~~--~~~~vv~~~~~~~~al~~~~~~~~dlvllD~~lp~~~g~~~~~~lr~~~~~~~ 81 (215)
T 1a04_A 6 ATILLIDD--HPMLRTGVKQLISMA--PDITVVGEASNGEQGIELAESLDPDLILLDLNMPGMNGLETLDKLREKSLSGR 81 (215)
T ss_dssp EEEEEECS--CHHHHHHHHHHHTTC--TTEEEEEEESSHHHHHHHHHHHCCSEEEEETTSTTSCHHHHHHHHHHSCCCSE
T ss_pred eEEEEECC--CHHHHHHHHHHHhcC--CCcEEEEEeCCHHHHHHHHHhcCCCEEEEeCCCCCCcHHHHHHHHHHhCCCCc
Confidence 46666663 234444455444432 1222212 22333322222 23687776433 3445676666654 3567
Q ss_pred eEEEecCCCcccccccccccccceeeeeecCCCHHHHHHHHHHHhc
Q 011163 410 PIAVTSSDIEFRHFAEFDHESTRFSRFISSTFGNISLSQALEEIKN 455 (492)
Q Consensus 410 vV~~~~~~gg~~e~v~~~~~~~g~~G~~~~~~~~~~l~~ai~~~~~ 455 (492)
+|+... ..-.+.+... ...|..||+..|.+++.|.++|..++.
T Consensus 82 ii~ls~--~~~~~~~~~~-~~~Ga~~~l~Kp~~~~~L~~~i~~~~~ 124 (215)
T 1a04_A 82 IVVFSV--SNHEEDVVTA-LKRGADGYLLKDMEPEDLLKALHQAAA 124 (215)
T ss_dssp EEEEEC--CCCHHHHHHH-HHTTCSEEEETTCCHHHHHHHHHHHHH
T ss_pred EEEEEC--CCCHHHHHHH-HHcCCcEEEeCCCCHHHHHHHHHHHHc
Confidence 776543 2222322111 114667899999999999999988764
No 438
>2c1x_A UDP-glucose flavonoid 3-O glycosyltransferase; WINE, catalysis, glycosylation; HET: UDP B3P; 1.9A {Vitis vinifera} SCOP: c.87.1.10 PDB: 2c1z_A* 2c9z_A*
Probab=22.02 E-value=52 Score=32.34 Aligned_cols=36 Identities=11% Similarity=0.114 Sum_probs=25.1
Q ss_pred CCCceEEEEeeccccccccCcHHHHHhHHHHHHHHCCCeEEE
Q 011163 6 RNGFHIIHICTEMDPLVSIGSLASYVTGLSGALQRKGHLVEV 47 (492)
Q Consensus 6 ~~~mkIl~v~~~~~p~~~~GG~~~~~~~l~~~L~~~Gh~V~v 47 (492)
.+++||+++.. | ..|=-.-+.+|++.|+++||.|+|
T Consensus 5 ~~~~hvv~~p~---p---~~GHi~P~l~la~~L~~rGh~v~v 40 (456)
T 2c1x_A 5 TTNPHVAVLAF---P---FSTHAAPLLAVVRRLAAAAPHAVF 40 (456)
T ss_dssp --CCEEEEECC---C---SSSSHHHHHHHHHHHHHHCTTSEE
T ss_pred CCCCEEEEEcC---c---ccchHHHHHHHHHHHHhCCCCeEE
Confidence 34578887652 3 256677789999999999877643
No 439
>2wm3_A NMRA-like family domain containing protein 1; unknown function; HET: NAP NFL; 1.85A {Homo sapiens} PDB: 2wmd_A* 2exx_A* 3dxf_A 3e5m_A
Probab=21.97 E-value=73 Score=28.75 Aligned_cols=25 Identities=20% Similarity=0.327 Sum_probs=18.7
Q ss_pred cCcHHHHHhHHHHHHHHCC-CeEEEEeec
Q 011163 24 IGSLASYVTGLSGALQRKG-HLVEVILPK 51 (492)
Q Consensus 24 ~GG~~~~~~~l~~~L~~~G-h~V~vi~~~ 51 (492)
+|++| ..+++.|.++| |+|.+++..
T Consensus 14 tG~iG---~~l~~~L~~~g~~~V~~~~R~ 39 (299)
T 2wm3_A 14 TGAQG---GSVARTLLEDGTFKVRVVTRN 39 (299)
T ss_dssp TSHHH---HHHHHHHHHHCSSEEEEEESC
T ss_pred CchHH---HHHHHHHHhcCCceEEEEEcC
Confidence 35555 55677888888 999998764
No 440
>1ooe_A Dihydropteridine reductase; structural genomics, PSI, protein structure initiative, southeast collaboratory for structural genomics; HET: MES; 1.65A {Caenorhabditis elegans} SCOP: c.2.1.2
Probab=21.95 E-value=95 Score=26.87 Aligned_cols=33 Identities=15% Similarity=0.156 Sum_probs=23.8
Q ss_pred eEEEEeeccccccccCcHHHHHhHHHHHHHHCCCeEEEEeec
Q 011163 10 HIIHICTEMDPLVSIGSLASYVTGLSGALQRKGHLVEVILPK 51 (492)
Q Consensus 10 kIl~v~~~~~p~~~~GG~~~~~~~l~~~L~~~Gh~V~vi~~~ 51 (492)
|.++|+- ..||+| ..+++.|.++|++|.++...
T Consensus 4 k~vlITG------as~gIG---~~~a~~l~~~G~~V~~~~r~ 36 (236)
T 1ooe_A 4 GKVIVYG------GKGALG---SAILEFFKKNGYTVLNIDLS 36 (236)
T ss_dssp EEEEEET------TTSHHH---HHHHHHHHHTTEEEEEEESS
T ss_pred CEEEEEC------CCcHHH---HHHHHHHHHCCCEEEEEecC
Confidence 5556663 347777 56788899999999887654
No 441
>3i1j_A Oxidoreductase, short chain dehydrogenase/reducta; dimer, MIXE beta, structural genomics, PSI-2; 1.90A {Pseudomonas syringae PV} SCOP: c.2.1.0
Probab=21.93 E-value=98 Score=26.92 Aligned_cols=33 Identities=12% Similarity=0.180 Sum_probs=24.4
Q ss_pred eEEEEeeccccccccCcHHHHHhHHHHHHHHCCCeEEEEeec
Q 011163 10 HIIHICTEMDPLVSIGSLASYVTGLSGALQRKGHLVEVILPK 51 (492)
Q Consensus 10 kIl~v~~~~~p~~~~GG~~~~~~~l~~~L~~~Gh~V~vi~~~ 51 (492)
|+++||- ..||+|. .+++.|.++|++|.++...
T Consensus 15 k~vlITG------as~gIG~---~ia~~l~~~G~~V~~~~r~ 47 (247)
T 3i1j_A 15 RVILVTG------AARGIGA---AAARAYAAHGASVVLLGRT 47 (247)
T ss_dssp CEEEESS------TTSHHHH---HHHHHHHHTTCEEEEEESC
T ss_pred CEEEEeC------CCChHHH---HHHHHHHHCCCEEEEEecC
Confidence 6667664 3477774 6789999999998877643
No 442
>1h5q_A NADP-dependent mannitol dehydrogenase; oxidoreductase, mannitol metabolism; HET: NAP; 1.50A {Agaricus bisporus} SCOP: c.2.1.2
Probab=21.88 E-value=72 Score=28.10 Aligned_cols=25 Identities=20% Similarity=0.234 Sum_probs=19.7
Q ss_pred cCcHHHHHhHHHHHHHHCCCeEEEEeec
Q 011163 24 IGSLASYVTGLSGALQRKGHLVEVILPK 51 (492)
Q Consensus 24 ~GG~~~~~~~l~~~L~~~Gh~V~vi~~~ 51 (492)
.||+| ..+++.|.++|++|.++...
T Consensus 23 sggiG---~~~a~~l~~~G~~V~~~~r~ 47 (265)
T 1h5q_A 23 NRGIG---LAFTRAVAAAGANVAVIYRS 47 (265)
T ss_dssp TSHHH---HHHHHHHHHTTEEEEEEESS
T ss_pred CchHH---HHHHHHHHHCCCeEEEEeCc
Confidence 46776 56788999999999888753
No 443
>2i87_A D-alanine-D-alanine ligase; APO; 2.00A {Staphylococcus aureus subsp} PDB: 2i8c_A* 3n8d_A* 2i80_A*
Probab=21.86 E-value=35 Score=32.37 Aligned_cols=42 Identities=10% Similarity=-0.001 Sum_probs=27.3
Q ss_pred CceEEEEeeccccccccCcHHHHHhHHHHHHHHCCCeEEEEeec
Q 011163 8 GFHIIHICTEMDPLVSIGSLASYVTGLSGALQRKGHLVEVILPK 51 (492)
Q Consensus 8 ~mkIl~v~~~~~p~~~~GG~~~~~~~l~~~L~~~Gh~V~vi~~~ 51 (492)
+|||+++.....+... =.-.....++++|.+.||+|.++...
T Consensus 3 ~~~v~vl~gg~s~E~~--vs~~s~~~v~~al~~~g~~v~~i~~~ 44 (364)
T 2i87_A 3 KENICIVFGGKSAEHE--VSILTAQNVLNAIDKDKYHVDIIYIT 44 (364)
T ss_dssp CEEEEEEEECSSSCHH--HHHHHHHHHHHTSCTTTEEEEEEEEC
T ss_pred CcEEEEEECCCCccch--hHHHHHHHHHHHHhhcCCEEEEEEEc
Confidence 5899998853222100 00123467889999999999988754
No 444
>1o5i_A 3-oxoacyl-(acyl carrier protein) reductase; TM1169, structur genomics, JCSG, PSI, protein structure initiative, joint CE structural genomics; HET: NAD; 2.50A {Thermotoga maritima} SCOP: c.2.1.2
Probab=21.84 E-value=99 Score=27.16 Aligned_cols=33 Identities=9% Similarity=0.138 Sum_probs=23.8
Q ss_pred ceEEEEeeccccccccCcHHHHHhHHHHHHHHCCCeEEEEee
Q 011163 9 FHIIHICTEMDPLVSIGSLASYVTGLSGALQRKGHLVEVILP 50 (492)
Q Consensus 9 mkIl~v~~~~~p~~~~GG~~~~~~~l~~~L~~~Gh~V~vi~~ 50 (492)
.|.++||- ..||+|. .+++.|.++|++|.++..
T Consensus 19 ~k~vlVTG------as~gIG~---~~a~~l~~~G~~V~~~~r 51 (249)
T 1o5i_A 19 DKGVLVLA------ASRGIGR---AVADVLSQEGAEVTICAR 51 (249)
T ss_dssp TCEEEEES------CSSHHHH---HHHHHHHHTTCEEEEEES
T ss_pred CCEEEEEC------CCCHHHH---HHHHHHHHCCCEEEEEcC
Confidence 35556664 3577775 578889999999988764
No 445
>2bka_A CC3, TAT-interacting protein TIP30; NADPH, PEG600, transcription; HET: NDP PE8; 1.7A {Homo sapiens} SCOP: c.2.1.2 PDB: 2fmu_A
Probab=21.78 E-value=82 Score=27.27 Aligned_cols=25 Identities=20% Similarity=0.185 Sum_probs=19.5
Q ss_pred cCcHHHHHhHHHHHHHHCCC--eEEEEeec
Q 011163 24 IGSLASYVTGLSGALQRKGH--LVEVILPK 51 (492)
Q Consensus 24 ~GG~~~~~~~l~~~L~~~Gh--~V~vi~~~ 51 (492)
.||+|. .+++.|.++|+ +|.++...
T Consensus 27 sg~iG~---~l~~~L~~~G~~~~V~~~~r~ 53 (242)
T 2bka_A 27 SGETGR---VLLKEILEQGLFSKVTLIGRR 53 (242)
T ss_dssp TSHHHH---HHHHHHHHHTCCSEEEEEESS
T ss_pred CcHHHH---HHHHHHHcCCCCCEEEEEEcC
Confidence 477764 56788999999 99888754
No 446
>3doj_A AT3G25530, dehydrogenase-like protein; gamma-hydroxybutyrate dehydrogenase, 4-hydroxybutyrate dehydrogenase; 2.10A {Arabidopsis thaliana}
Probab=21.77 E-value=88 Score=28.73 Aligned_cols=33 Identities=18% Similarity=0.143 Sum_probs=23.9
Q ss_pred CceEEEEeeccccccccCcHHHHHhHHHHHHHHCCCeEEEEeec
Q 011163 8 GFHIIHICTEMDPLVSIGSLASYVTGLSGALQRKGHLVEVILPK 51 (492)
Q Consensus 8 ~mkIl~v~~~~~p~~~~GG~~~~~~~l~~~L~~~Gh~V~vi~~~ 51 (492)
.|||.+|.. |-+ =..++..|.+.||+|.++...
T Consensus 21 m~~I~iIG~--------G~m---G~~~A~~l~~~G~~V~~~dr~ 53 (310)
T 3doj_A 21 MMEVGFLGL--------GIM---GKAMSMNLLKNGFKVTVWNRT 53 (310)
T ss_dssp SCEEEEECC--------SHH---HHHHHHHHHHTTCEEEEECSS
T ss_pred CCEEEEECc--------cHH---HHHHHHHHHHCCCeEEEEeCC
Confidence 378888653 434 456788899999999887543
No 447
>4f6c_A AUSA reductase domain protein; thioester reductase, oxidoreductase; 2.81A {Staphylococcus aureus}
Probab=21.77 E-value=68 Score=30.93 Aligned_cols=26 Identities=27% Similarity=0.207 Sum_probs=19.9
Q ss_pred cCcHHHHHhHHHHHHHHCCCeEEEEeecC
Q 011163 24 IGSLASYVTGLSGALQRKGHLVEVILPKY 52 (492)
Q Consensus 24 ~GG~~~~~~~l~~~L~~~Gh~V~vi~~~~ 52 (492)
.|++| ..+++.|.+.|++|.++....
T Consensus 78 tG~iG---~~l~~~L~~~g~~V~~~~R~~ 103 (427)
T 4f6c_A 78 TGFLG---AYLIEALQGYSHRIYCFIRAD 103 (427)
T ss_dssp TSHHH---HHHHHHHTTTEEEEEEEEECS
T ss_pred CcHHH---HHHHHHHHcCCCEEEEEECCC
Confidence 46666 467788888999999988653
No 448
>4fs3_A Enoyl-[acyl-carrier-protein] reductase [NADPH] FA; rossmann fold, short chain dehydrogenase, NADPH binding, oxidoreductase; HET: 0WD 0WE; 1.80A {Staphylococcus aureus subsp} PDB: 3gr6_A* 3gns_A* 4all_A* 3gnt_A 4alk_A* 4alj_A* 4ali_A* 4alm_A 4aln_A
Probab=21.60 E-value=1.3e+02 Score=26.53 Aligned_cols=39 Identities=21% Similarity=0.169 Sum_probs=0.0
Q ss_pred CccccCCCceEEEEeeccccccccC--cHHHHHhHHHHHHHHCCCeEEEEeec
Q 011163 1 MEKWLRNGFHIIHICTEMDPLVSIG--SLASYVTGLSGALQRKGHLVEVILPK 51 (492)
Q Consensus 1 ~~~~~~~~mkIl~v~~~~~p~~~~G--G~~~~~~~l~~~L~~~Gh~V~vi~~~ 51 (492)
|.+-+. |+++||- ..| |+| ..++++|++.|++|.+....
T Consensus 1 M~~l~g---K~alVTG------aa~~~GIG---~aiA~~la~~Ga~Vvi~~r~ 41 (256)
T 4fs3_A 1 MLNLEN---KTYVIMG------IANKRSIA---FGVAKVLDQLGAKLVFTYRK 41 (256)
T ss_dssp CCCCTT---CEEEEEC------CCSTTCHH---HHHHHHHHHTTCEEEEEESS
T ss_pred CcCCCC---CEEEEEC------CCCCchHH---HHHHHHHHHCCCEEEEEECC
No 449
>1oi4_A Hypothetical protein YHBO; PFPI/THIJ family, complete proteome, PFPI, THIJ, bacterial targets at IGS-CNRS, france, BIGS, structural genomics; 2.03A {Escherichia coli} SCOP: c.23.16.2
Probab=21.59 E-value=1.4e+02 Score=25.03 Aligned_cols=43 Identities=19% Similarity=0.068 Sum_probs=28.9
Q ss_pred ccCCCceEEEEeeccccccccCcHHHHHhHHHHHHHHCCCeEEEEeecCC
Q 011163 4 WLRNGFHIIHICTEMDPLVSIGSLASYVTGLSGALQRKGHLVEVILPKYA 53 (492)
Q Consensus 4 ~~~~~mkIl~v~~~~~p~~~~GG~~~~~~~l~~~L~~~Gh~V~vi~~~~~ 53 (492)
...++|||+++..+ |-...-+......|.+.|++|.++++...
T Consensus 19 ~~~~~~kV~ill~~-------g~~~~e~~~~~~~l~~ag~~v~~vs~~~~ 61 (193)
T 1oi4_A 19 KAGLSKKIAVLITD-------EFEDSEFTSPADEFRKAGHEVITIEKQAG 61 (193)
T ss_dssp TTTCCCEEEEECCT-------TBCTHHHHHHHHHHHHTTCEEEEEESSTT
T ss_pred hhccCCEEEEEECC-------CCCHHHHHHHHHHHHHCCCEEEEEECCCC
Confidence 34455789998863 22223345566778888999999998643
No 450
>2hrz_A AGR_C_4963P, nucleoside-diphosphate-sugar epimerase; agrobacterium tumefa structural genomics, PSI-2, protein structure initiative; 1.85A {Agrobacterium tumefaciens}
Probab=21.56 E-value=71 Score=29.49 Aligned_cols=35 Identities=23% Similarity=0.301 Sum_probs=23.6
Q ss_pred CCceEEEEeeccccccccCcHHHHHhHHHHHHHHCC-------CeEEEEeec
Q 011163 7 NGFHIIHICTEMDPLVSIGSLASYVTGLSGALQRKG-------HLVEVILPK 51 (492)
Q Consensus 7 ~~mkIl~v~~~~~p~~~~GG~~~~~~~l~~~L~~~G-------h~V~vi~~~ 51 (492)
+.|+|++ +- ..|++| ..+++.|.++| ++|.++...
T Consensus 13 ~~~~vlV-tG------a~G~iG---~~l~~~L~~~g~~~~r~~~~V~~~~r~ 54 (342)
T 2hrz_A 13 QGMHIAI-IG------AAGMVG---RKLTQRLVKDGSLGGKPVEKFTLIDVF 54 (342)
T ss_dssp SCEEEEE-ET------TTSHHH---HHHHHHHHHHCEETTEEEEEEEEEESS
T ss_pred cCCEEEE-EC------CCcHHH---HHHHHHHHhcCCcccCCCceEEEEEcc
Confidence 4577755 32 246666 46678899999 788887654
No 451
>3ohs_X Trans-1,2-dihydrobenzene-1,2-DIOL dehydrogenase; dimeric dihydrodiol dehydrogenase, MDD, oxidoreductase; 1.90A {Macaca fascicularis} PDB: 2o48_X 2poq_X* 2o4u_X
Probab=21.51 E-value=1.4e+02 Score=27.62 Aligned_cols=79 Identities=11% Similarity=0.032 Sum_probs=46.3
Q ss_pred HHHHHHHHhHcCcEEEEEecCCChhHHHHHHHHHHHhCCCeEEEEeccCHHHHHHHHh--cCCEEEECCCCCCCchHHHH
Q 011163 325 LKAVVRGAKMRGIQFVFTGTNKLPSASRALVSFQEELKDGIVIFVDSYDDALLHLIFS--GSDIILCHSFHDPLLQVPLK 402 (492)
Q Consensus 325 li~a~~~l~~~~~~lvivG~g~~~~~~~~l~~~~~~~~~~~v~~~~~~~~~~~~~~~~--~adi~v~pS~~E~~glv~lE 402 (492)
.++++..+...+++++-+-+. + .+..++++++++..++ .. +. .++++ ..|+++.++....-.-...+
T Consensus 17 ~~~~l~~~~~~~~~l~av~d~-~---~~~a~~~a~~~~~~~~--~~--~~---~~ll~~~~vD~V~i~tp~~~H~~~~~~ 85 (334)
T 3ohs_X 17 FTAVLQTLPRSEHQVVAVAAR-D---LSRAKEFAQKHDIPKA--YG--SY---EELAKDPNVEVAYVGTQHPQHKAAVML 85 (334)
T ss_dssp HHHHHTTSCTTTEEEEEEECS-S---HHHHHHHHHHHTCSCE--ES--SH---HHHHHCTTCCEEEECCCGGGHHHHHHH
T ss_pred HHHHHHhCCCCCeEEEEEEcC-C---HHHHHHHHHHcCCCcc--cC--CH---HHHhcCCCCCEEEECCCcHHHHHHHHH
Confidence 455554443224567766643 2 3456667777642222 11 22 24455 58999998864444455778
Q ss_pred HhhcCCceEEEe
Q 011163 403 ALKYGAAPIAVT 414 (492)
Q Consensus 403 Ama~G~PvV~~~ 414 (492)
|+..|++|++=.
T Consensus 86 al~~GkhVl~EK 97 (334)
T 3ohs_X 86 CLAAGKAVLCEK 97 (334)
T ss_dssp HHHTTCEEEEES
T ss_pred HHhcCCEEEEEC
Confidence 999999887744
No 452
>1qyc_A Phenylcoumaran benzylic ether reductase PT1; NADPH-dependent aromatic alcohol reductases, pcber, PLR, IFR, lignans, isoflavonoids, plant protein; 2.20A {Pinus taeda} SCOP: c.2.1.2
Probab=21.50 E-value=52 Score=29.89 Aligned_cols=33 Identities=18% Similarity=0.227 Sum_probs=23.6
Q ss_pred ceEEEEeeccccccccCcHHHHHhHHHHHHHHCCCeEEEEeec
Q 011163 9 FHIIHICTEMDPLVSIGSLASYVTGLSGALQRKGHLVEVILPK 51 (492)
Q Consensus 9 mkIl~v~~~~~p~~~~GG~~~~~~~l~~~L~~~Gh~V~vi~~~ 51 (492)
|+|+++.. +|++|. .++++|.+.||+|.+++..
T Consensus 5 ~~ilVtGa-------tG~iG~---~l~~~L~~~g~~V~~l~R~ 37 (308)
T 1qyc_A 5 SRILLIGA-------TGYIGR---HVAKASLDLGHPTFLLVRE 37 (308)
T ss_dssp CCEEEEST-------TSTTHH---HHHHHHHHTTCCEEEECCC
T ss_pred CEEEEEcC-------CcHHHH---HHHHHHHhCCCCEEEEECC
Confidence 56765432 467765 5678899999999888764
No 453
>3qiv_A Short-chain dehydrogenase or 3-oxoacyl-[acyl-CARR protein] reductase; structural genomics; 2.25A {Mycobacterium avium subsp}
Probab=21.50 E-value=96 Score=27.14 Aligned_cols=33 Identities=24% Similarity=0.188 Sum_probs=24.5
Q ss_pred ceEEEEeeccccccccCcHHHHHhHHHHHHHHCCCeEEEEee
Q 011163 9 FHIIHICTEMDPLVSIGSLASYVTGLSGALQRKGHLVEVILP 50 (492)
Q Consensus 9 mkIl~v~~~~~p~~~~GG~~~~~~~l~~~L~~~Gh~V~vi~~ 50 (492)
.|+++||- ..||+| ..+++.|.++|++|.++..
T Consensus 9 ~k~vlITG------as~giG---~~~a~~l~~~G~~V~~~~r 41 (253)
T 3qiv_A 9 NKVGIVTG------SGGGIG---QAYAEALAREGAAVVVADI 41 (253)
T ss_dssp TCEEEEET------TTSHHH---HHHHHHHHHTTCEEEEEES
T ss_pred CCEEEEEC------CCChHH---HHHHHHHHHCCCEEEEEcC
Confidence 36777774 346666 5788999999999887764
No 454
>3f1l_A Uncharacterized oxidoreductase YCIK; E. coli, NADP+,; 0.95A {Escherichia coli K12} SCOP: c.2.1.0 PDB: 3f1k_A 3e9q_A* 3f5q_A 3gz4_A* 3f5s_A 3gy0_A* 3iah_A* 3g1t_A
Probab=21.48 E-value=1.2e+02 Score=26.55 Aligned_cols=32 Identities=16% Similarity=0.150 Sum_probs=24.6
Q ss_pred eEEEEeeccccccccCcHHHHHhHHHHHHHHCCCeEEEEee
Q 011163 10 HIIHICTEMDPLVSIGSLASYVTGLSGALQRKGHLVEVILP 50 (492)
Q Consensus 10 kIl~v~~~~~p~~~~GG~~~~~~~l~~~L~~~Gh~V~vi~~ 50 (492)
|+++||- ..||+|. .+++.|.++|++|.++..
T Consensus 13 k~vlVTG------as~gIG~---aia~~l~~~G~~V~~~~r 44 (252)
T 3f1l_A 13 RIILVTG------ASDGIGR---EAAMTYARYGATVILLGR 44 (252)
T ss_dssp CEEEEES------TTSHHHH---HHHHHHHHTTCEEEEEES
T ss_pred CEEEEeC------CCChHHH---HHHHHHHHCCCEEEEEeC
Confidence 6777774 3577774 678899999999887764
No 455
>3l18_A Intracellular protease I; gatase1_PFPI_LIKE, hydrolase; 1.78A {Thermococcus onnurineus} SCOP: c.23.16.2 PDB: 1g2i_A
Probab=21.41 E-value=1.3e+02 Score=24.49 Aligned_cols=38 Identities=13% Similarity=0.126 Sum_probs=27.7
Q ss_pred CceEEEEeeccccccccCcHHHHHhHHHHHHHHCCCeEEEEeecC
Q 011163 8 GFHIIHICTEMDPLVSIGSLASYVTGLSGALQRKGHLVEVILPKY 52 (492)
Q Consensus 8 ~mkIl~v~~~~~p~~~~GG~~~~~~~l~~~L~~~Gh~V~vi~~~~ 52 (492)
+|||+++..+ |-...-+......|.+.|++|.++++..
T Consensus 2 ~~ki~il~~~-------g~~~~e~~~~~~~l~~ag~~v~~vs~~~ 39 (168)
T 3l18_A 2 SMKVLFLSAD-------GFEDLELIYPLHRIKEEGHEVYVASFQR 39 (168)
T ss_dssp CCEEEEECCT-------TBCHHHHHHHHHHHHHTTCEEEEEESSS
T ss_pred CcEEEEEeCC-------CccHHHHHHHHHHHHHCCCEEEEEECCC
Confidence 5899998753 3333445566777888999999999753
No 456
>1uay_A Type II 3-hydroxyacyl-COA dehydrogenase; beta oxidation, fatty acid, structural genomi structural genomics/proteomics initiative, RSGI; HET: ADN; 1.40A {Thermus thermophilus} SCOP: c.2.1.2
Probab=21.36 E-value=87 Score=27.06 Aligned_cols=25 Identities=24% Similarity=0.223 Sum_probs=19.5
Q ss_pred cCcHHHHHhHHHHHHHHCCCeEEEEeec
Q 011163 24 IGSLASYVTGLSGALQRKGHLVEVILPK 51 (492)
Q Consensus 24 ~GG~~~~~~~l~~~L~~~Gh~V~vi~~~ 51 (492)
.||+| ..+++.|.++|++|.++...
T Consensus 11 sggiG---~~la~~l~~~G~~V~~~~r~ 35 (242)
T 1uay_A 11 ASGLG---RAAALALKARGYRVVVLDLR 35 (242)
T ss_dssp TSHHH---HHHHHHHHHHTCEEEEEESS
T ss_pred CChHH---HHHHHHHHHCCCEEEEEccC
Confidence 46666 56788899999999888654
No 457
>1yxm_A Pecra, peroxisomal trans 2-enoyl COA reductase; perioxisomes, fatty acid synthesis, short-chain dehydrogenases/reductases, structural genomics; HET: ADE; 1.90A {Homo sapiens} SCOP: c.2.1.2
Probab=21.29 E-value=1.2e+02 Score=27.50 Aligned_cols=32 Identities=9% Similarity=0.119 Sum_probs=23.2
Q ss_pred eEEEEeeccccccccCcHHHHHhHHHHHHHHCCCeEEEEee
Q 011163 10 HIIHICTEMDPLVSIGSLASYVTGLSGALQRKGHLVEVILP 50 (492)
Q Consensus 10 kIl~v~~~~~p~~~~GG~~~~~~~l~~~L~~~Gh~V~vi~~ 50 (492)
|.++||- ..||+| ..+++.|.++|++|.++..
T Consensus 19 k~vlVTG------asggIG---~~la~~l~~~G~~V~~~~r 50 (303)
T 1yxm_A 19 QVAIVTG------GATGIG---KAIVKELLELGSNVVIASR 50 (303)
T ss_dssp CEEEEET------TTSHHH---HHHHHHHHHTTCEEEEEES
T ss_pred CEEEEEC------CCcHHH---HHHHHHHHHCCCEEEEEeC
Confidence 4556663 346776 4678889999999888764
No 458
>3cky_A 2-hydroxymethyl glutarate dehydrogenase; rossmann fold, two domain enzyme, oxidoreductase; 2.30A {Eubacterium barkeri}
Probab=21.25 E-value=90 Score=28.29 Aligned_cols=32 Identities=19% Similarity=0.151 Sum_probs=23.2
Q ss_pred CceEEEEeeccccccccCcHHHHHhHHHHHHHHCCCeEEEEee
Q 011163 8 GFHIIHICTEMDPLVSIGSLASYVTGLSGALQRKGHLVEVILP 50 (492)
Q Consensus 8 ~mkIl~v~~~~~p~~~~GG~~~~~~~l~~~L~~~Gh~V~vi~~ 50 (492)
+|||++|.. |.++.. ++..|.+.||+|.++..
T Consensus 4 ~~~i~iiG~--------G~~G~~---~a~~l~~~g~~V~~~~~ 35 (301)
T 3cky_A 4 SIKIGFIGL--------GAMGKP---MAINLLKEGVTVYAFDL 35 (301)
T ss_dssp CCEEEEECC--------CTTHHH---HHHHHHHTTCEEEEECS
T ss_pred CCEEEEECc--------cHHHHH---HHHHHHHCCCeEEEEeC
Confidence 489998764 555543 56778889999887643
No 459
>1tll_A Nitric-oxide synthase, brain; reductase module, FMN, FAD, NADP+, oxidoreductase; HET: FMN FAD NAP; 2.30A {Rattus norvegicus} SCOP: b.43.4.1 c.23.5.2 c.25.1.4
Probab=21.25 E-value=96 Score=32.36 Aligned_cols=45 Identities=9% Similarity=0.143 Sum_probs=32.7
Q ss_pred CccccCCCceEEEEeeccccccccCcHHHHHhHHHHHHHHCCCeEEEEeec
Q 011163 1 MEKWLRNGFHIIHICTEMDPLVSIGSLASYVTGLSGALQRKGHLVEVILPK 51 (492)
Q Consensus 1 ~~~~~~~~mkIl~v~~~~~p~~~~GG~~~~~~~l~~~L~~~Gh~V~vi~~~ 51 (492)
|.|...+++|++++.. +.+|-++.+...|++.+. .|+++.|++..
T Consensus 4 ~~~~~~~~~k~~IlY~-----S~TG~te~~A~~l~~~l~-~~~~~~v~~m~ 48 (688)
T 1tll_A 4 MGQAMAKRVKATILYA-----TETGKSQAYAKTLCEIFK-HAFDAKAMSME 48 (688)
T ss_dssp -----CCSCEEEEEEE-----CSSSHHHHHHHHHHHHHT-TTSEEEEEETT
T ss_pred hhhHhcCCCeEEEEEE-----CCchHHHHHHHHHHHHHh-cCCCcEEeecc
Confidence 6777778888877765 357999999999999985 78999888754
No 460
>1q74_A 1D-MYO-inosityl 2-acetamido-2-deoxy-alpha-D- glucopyranoside deacetylase (MSHB); rossmann fold, zinc aminohydrolase; HET: PE4; 1.70A {Mycobacterium tuberculosis} SCOP: c.134.1.1 PDB: 1q7t_A*
Probab=21.21 E-value=1.5e+02 Score=27.19 Aligned_cols=41 Identities=10% Similarity=0.054 Sum_probs=28.3
Q ss_pred CceEEEEeeccccccccCcHHHHHhHHHHHHHHCCCeEEEEeecCCC
Q 011163 8 GFHIIHICTEMDPLVSIGSLASYVTGLSGALQRKGHLVEVILPKYAC 54 (492)
Q Consensus 8 ~mkIl~v~~~~~p~~~~GG~~~~~~~l~~~L~~~Gh~V~vi~~~~~~ 54 (492)
.++||+|++ +|- -....+..+...+.+.|++|.|++...+.
T Consensus 4 ~~~vL~v~A--HPD----De~l~~ggtla~~~~~G~~V~vv~lT~Ge 44 (303)
T 1q74_A 4 TPRLLFVHA--HPD----DESLSNGATIAHYTSRGAQVHVVTCTLGE 44 (303)
T ss_dssp CCEEEEEES--STT----HHHHHHHHHHHHHHHTTCEEEEEESCCCT
T ss_pred CCeEEEEEe--CCc----hHHHhHHHHHHHHHHCCCcEEEEEEcCCC
Confidence 579999998 553 23333445555677789999999876553
No 461
>1rtt_A Conserved hypothetical protein; protein structure initiative, SAD with sulfur, putative REDU PSI; 1.28A {Pseudomonas aeruginosa} SCOP: c.23.5.4 PDB: 1x77_A*
Probab=21.18 E-value=42 Score=28.31 Aligned_cols=39 Identities=10% Similarity=0.036 Sum_probs=23.5
Q ss_pred CceEEEEeeccccccccCcHHHHHhHHHHHHHHCCCeEEEEee
Q 011163 8 GFHIIHICTEMDPLVSIGSLASYVTGLSGALQRKGHLVEVILP 50 (492)
Q Consensus 8 ~mkIl~v~~~~~p~~~~GG~~~~~~~l~~~L~~~Gh~V~vi~~ 50 (492)
+|||++|.. .|.. .|-....+..+++.+. .|++|.++-.
T Consensus 6 ~Mkilii~g--S~r~-~g~t~~la~~i~~~l~-~g~~v~~~dl 44 (193)
T 1rtt_A 6 DIKVLGISG--SLRS-GSYNSAALQEAIGLVP-PGMSIELADI 44 (193)
T ss_dssp -CEEEEEES--CCST-TCHHHHHHHHHHTTCC-TTCEEEECCC
T ss_pred CceEEEEEC--CCCC-CChHHHHHHHHHHhcc-CCCeEEEEeH
Confidence 489999886 3431 2434444455555555 6888888754
No 462
>1xq1_A Putative tropinone reducatse; structural genomics, protein structure initiative, CESG, AT1 reductively methylated protein; 2.10A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 2q45_A
Probab=21.00 E-value=95 Score=27.40 Aligned_cols=32 Identities=3% Similarity=0.124 Sum_probs=22.7
Q ss_pred eEEEEeeccccccccCcHHHHHhHHHHHHHHCCCeEEEEee
Q 011163 10 HIIHICTEMDPLVSIGSLASYVTGLSGALQRKGHLVEVILP 50 (492)
Q Consensus 10 kIl~v~~~~~p~~~~GG~~~~~~~l~~~L~~~Gh~V~vi~~ 50 (492)
|.++|+- ..||+| ..+++.|.++|++|.++..
T Consensus 15 k~vlITG------asggiG---~~la~~l~~~G~~V~~~~r 46 (266)
T 1xq1_A 15 KTVLVTG------GTKGIG---HAIVEEFAGFGAVIHTCAR 46 (266)
T ss_dssp CEEEETT------TTSHHH---HHHHHHHHHTTCEEEEEES
T ss_pred CEEEEEC------CCCHHH---HHHHHHHHHCCCEEEEEeC
Confidence 4555553 346666 5678889999999988764
No 463
>1xhf_A DYE resistance, aerobic respiration control protein ARCA; two-component system, gene regulation, transcription factor, anoxic redox control; 2.15A {Escherichia coli} SCOP: c.23.1.1 PDB: 1xhe_A
Probab=20.94 E-value=2.5e+02 Score=20.50 Aligned_cols=110 Identities=14% Similarity=0.054 Sum_probs=58.8
Q ss_pred cEEEEEecCCChhHHHHHHHHHHHhCCCeEEEEeccCHHHHHHHHh--cCCEEEECCCC-CCCchHHHHHhh--cCCceE
Q 011163 337 IQFVFTGTNKLPSASRALVSFQEELKDGIVIFVDSYDDALLHLIFS--GSDIILCHSFH-DPLLQVPLKALK--YGAAPI 411 (492)
Q Consensus 337 ~~lvivG~g~~~~~~~~l~~~~~~~~~~~v~~~~~~~~~~~~~~~~--~adi~v~pS~~-E~~glv~lEAma--~G~PvV 411 (492)
.+++|+.+ ++...+.++...+..+ -.+.. .-+..+....+. ..|++++=... +.-|+.+++.+. ..+|+|
T Consensus 4 ~~ilivdd--~~~~~~~l~~~l~~~~-~~v~~--~~~~~~a~~~~~~~~~dlvi~D~~l~~~~g~~~~~~l~~~~~~~ii 78 (123)
T 1xhf_A 4 PHILIVED--ELVTRNTLKSIFEAEG-YDVFE--ATDGAEMHQILSEYDINLVIMDINLPGKNGLLLARELREQANVALM 78 (123)
T ss_dssp CEEEEECS--CHHHHHHHHHHHHTTT-CEEEE--ESSHHHHHHHHHHSCCSEEEECSSCSSSCHHHHHHHHHHHCCCEEE
T ss_pred ceEEEEeC--CHHHHHHHHHHHhhCC-cEEEE--eCCHHHHHHHHhcCCCCEEEEcCCCCCCCHHHHHHHHHhCCCCcEE
Confidence 46667663 3344555555555432 23332 223333223322 46887765432 345666666553 467777
Q ss_pred EEecCCCcccccccccccccceeeeeecCCCHHHHHHHHHHHh
Q 011163 412 AVTSSDIEFRHFAEFDHESTRFSRFISSTFGNISLSQALEEIK 454 (492)
Q Consensus 412 ~~~~~~gg~~e~v~~~~~~~g~~G~~~~~~~~~~l~~ai~~~~ 454 (492)
+... ..-.+..... ...|..+|+..|.+.+.|..+++.++
T Consensus 79 ~~s~--~~~~~~~~~~-~~~g~~~~l~KP~~~~~l~~~i~~~~ 118 (123)
T 1xhf_A 79 FLTG--RDNEVDKILG-LEIGADDYITKPFNPRELTIRARNLL 118 (123)
T ss_dssp EEES--CCSHHHHHHH-HHHTCSEEEESSCCHHHHHHHHHHHH
T ss_pred EEEC--CCChHHHHHH-HhcCcceEEeCCCCHHHHHHHHHHHH
Confidence 6543 2222221110 11356789999999999999888765
No 464
>4da9_A Short-chain dehydrogenase/reductase; structural genomics, protein structure initiative, PSI-biology; 2.50A {Sinorhizobium meliloti}
Probab=20.85 E-value=1.1e+02 Score=27.42 Aligned_cols=33 Identities=12% Similarity=0.133 Sum_probs=24.9
Q ss_pred ceEEEEeeccccccccCcHHHHHhHHHHHHHHCCCeEEEEee
Q 011163 9 FHIIHICTEMDPLVSIGSLASYVTGLSGALQRKGHLVEVILP 50 (492)
Q Consensus 9 mkIl~v~~~~~p~~~~GG~~~~~~~l~~~L~~~Gh~V~vi~~ 50 (492)
.|+++||- ..||+| ..+++.|.++|++|.++..
T Consensus 29 ~k~~lVTG------as~GIG---~aia~~la~~G~~V~~~~~ 61 (280)
T 4da9_A 29 RPVAIVTG------GRRGIG---LGIARALAASGFDIAITGI 61 (280)
T ss_dssp CCEEEEET------TTSHHH---HHHHHHHHHTTCEEEEEES
T ss_pred CCEEEEec------CCCHHH---HHHHHHHHHCCCeEEEEeC
Confidence 36777774 346777 4678899999999988764
No 465
>3asu_A Short-chain dehydrogenase/reductase SDR; SDR family, rossmann-fold, short-chain dehydrogenase/reducta ALLO-threonine dehydrogenase; 1.90A {Escherichia coli} PDB: 3asv_A*
Probab=20.82 E-value=82 Score=27.69 Aligned_cols=25 Identities=12% Similarity=0.179 Sum_probs=19.6
Q ss_pred ccCcHHHHHhHHHHHHHHCCCeEEEEee
Q 011163 23 SIGSLASYVTGLSGALQRKGHLVEVILP 50 (492)
Q Consensus 23 ~~GG~~~~~~~l~~~L~~~Gh~V~vi~~ 50 (492)
..||+|. .+++.|.++|++|.++..
T Consensus 8 as~gIG~---aia~~l~~~G~~V~~~~r 32 (248)
T 3asu_A 8 ATAGFGE---CITRRFIQQGHKVIATGR 32 (248)
T ss_dssp TTSTTHH---HHHHHHHHTTCEEEEEES
T ss_pred CCChHHH---HHHHHHHHCCCEEEEEeC
Confidence 3577774 678889999999988764
No 466
>3ak4_A NADH-dependent quinuclidinone reductase; SDR, (R)-3-quinuclidinol, chiral alcohol, oxidoreductase; HET: NAD; 2.00A {Agrobacterium tumefaciens}
Probab=20.78 E-value=1.2e+02 Score=26.81 Aligned_cols=32 Identities=13% Similarity=0.171 Sum_probs=23.2
Q ss_pred eEEEEeeccccccccCcHHHHHhHHHHHHHHCCCeEEEEee
Q 011163 10 HIIHICTEMDPLVSIGSLASYVTGLSGALQRKGHLVEVILP 50 (492)
Q Consensus 10 kIl~v~~~~~p~~~~GG~~~~~~~l~~~L~~~Gh~V~vi~~ 50 (492)
|.++||- ..||+|. .+++.|.++|++|.++..
T Consensus 13 k~vlVTG------as~gIG~---~ia~~l~~~G~~V~~~~r 44 (263)
T 3ak4_A 13 RKAIVTG------GSKGIGA---AIARALDKAGATVAIADL 44 (263)
T ss_dssp CEEEEET------TTSHHHH---HHHHHHHHTTCEEEEEES
T ss_pred CEEEEeC------CCChHHH---HHHHHHHHCCCEEEEEeC
Confidence 4556663 3577774 578889999999988754
No 467
>2h54_A Caspase-1; allosteric site, dimer interface, hydrolase; HET: PHQ; 1.80A {Homo sapiens} PDB: 1rwm_A* 1rwk_A* 1rwo_A* 1rwp_A* 1rwv_A* 1rww_A* 1rwn_A* 2h48_A* 2h4w_A* 1rwx_A* 2hbq_A* 2hby_A* 1ibc_A 3d6m_A* 2h4y_A* 2h51_A* 3d6f_A* 3d6h_A* 2hbz_A* 2hbr_A* ...
Probab=20.74 E-value=2.7e+02 Score=23.15 Aligned_cols=41 Identities=27% Similarity=0.341 Sum_probs=29.8
Q ss_pred ceEEE-Eeec-cccccccCcHHHHHhHHHHHHHHCCCeEEEEe
Q 011163 9 FHIIH-ICTE-MDPLVSIGSLASYVTGLSGALQRKGHLVEVIL 49 (492)
Q Consensus 9 mkIl~-v~~~-~~p~~~~GG~~~~~~~l~~~L~~~Gh~V~vi~ 49 (492)
.++++ |+.. |......-|...-+..|...|.++|.+|.+..
T Consensus 43 ~g~ALIInn~~f~~~~~R~G~~~Da~~L~~~f~~LgF~V~~~~ 85 (178)
T 2h54_A 43 TRLALIICNEEFDSIPRRTGAEVDITGMTMLLQNLGYSVDVKK 85 (178)
T ss_dssp CCEEEEEECCCCSSSCCCTTHHHHHHHHHHHHHHTTCEEEEEE
T ss_pred CCEEEEEehhhcCCCccCCCCHHHHHHHHHHHHHCCCEEEEec
Confidence 34444 4443 32233457999999999999999999998875
No 468
>1sny_A Sniffer CG10964-PA; alpha and beta protein, rossmann fold, dinucleotide binding oxidoreductase; HET: NAP; 1.75A {Drosophila melanogaster} SCOP: c.2.1.2
Probab=20.74 E-value=73 Score=28.19 Aligned_cols=35 Identities=20% Similarity=0.087 Sum_probs=25.6
Q ss_pred CceEEEEeeccccccccCcHHHHHhHHHHHHHHCC---CeEEEEeec
Q 011163 8 GFHIIHICTEMDPLVSIGSLASYVTGLSGALQRKG---HLVEVILPK 51 (492)
Q Consensus 8 ~mkIl~v~~~~~p~~~~GG~~~~~~~l~~~L~~~G---h~V~vi~~~ 51 (492)
.||.++|+- ..||+| ..+++.|.++| ++|.++...
T Consensus 20 ~~k~vlITG------asggIG---~~la~~L~~~G~~~~~V~~~~r~ 57 (267)
T 1sny_A 20 HMNSILITG------CNRGLG---LGLVKALLNLPQPPQHLFTTCRN 57 (267)
T ss_dssp CCSEEEESC------CSSHHH---HHHHHHHHTSSSCCSEEEEEESC
T ss_pred CCCEEEEEC------CCCcHH---HHHHHHHHhcCCCCcEEEEEecC
Confidence 356666663 346666 57889999999 999888764
No 469
>1zk4_A R-specific alcohol dehydrogenase; short chain reductases/dehydrogenases, magnesium dependence, oxidoreductase; HET: NAP; 1.00A {Lactobacillus brevis} SCOP: c.2.1.2 PDB: 1nxq_A* 1zjy_A* 1zjz_A* 1zk0_A* 1zk1_A* 1zk2_A 1zk3_A
Probab=20.74 E-value=98 Score=26.96 Aligned_cols=24 Identities=8% Similarity=0.068 Sum_probs=18.9
Q ss_pred cCcHHHHHhHHHHHHHHCCCeEEEEee
Q 011163 24 IGSLASYVTGLSGALQRKGHLVEVILP 50 (492)
Q Consensus 24 ~GG~~~~~~~l~~~L~~~Gh~V~vi~~ 50 (492)
.||+| ..+++.|.++|++|.++..
T Consensus 15 sggiG---~~~a~~l~~~G~~V~~~~r 38 (251)
T 1zk4_A 15 TLGIG---LAIATKFVEEGAKVMITGR 38 (251)
T ss_dssp TSHHH---HHHHHHHHHTTCEEEEEES
T ss_pred CChHH---HHHHHHHHHCCCEEEEEeC
Confidence 46666 5688899999999888764
No 470
>1e4e_A Vancomycin/teicoplanin A-type resistance protein; ligase, cell WALL, antibiotic resistance, membrane, peptidog synthesis; HET: ADP PHY; 2.5A {Enterococcus faecium} SCOP: c.30.1.2 d.142.1.1 PDB: 1e4e_B*
Probab=20.72 E-value=39 Score=31.63 Aligned_cols=41 Identities=2% Similarity=-0.056 Sum_probs=26.2
Q ss_pred CceEEEEeeccccccccCcHH-HHHhHHHHHHHHCCCeEEEEeec
Q 011163 8 GFHIIHICTEMDPLVSIGSLA-SYVTGLSGALQRKGHLVEVILPK 51 (492)
Q Consensus 8 ~mkIl~v~~~~~p~~~~GG~~-~~~~~l~~~L~~~Gh~V~vi~~~ 51 (492)
+|||+++....... --+. .....++++|.+.||+|.++...
T Consensus 3 ~~~v~vl~gG~s~E---~~vs~~s~~~v~~al~~~g~~v~~i~~~ 44 (343)
T 1e4e_A 3 RIKVAILFGGCSEE---HDVSVKSAIEIAANINKEKYEPLYIGIT 44 (343)
T ss_dssp CEEEEEEEECSSTT---HHHHHHHHHHHHHHSCTTTEEEEEEEEC
T ss_pred CcEEEEEeCCCCCC---cchhHHHHHHHHHHhhhcCCEEEEEEEc
Confidence 58999987531110 0011 13456888999999999988654
No 471
>3lf2_A Short chain oxidoreductase Q9HYA2; SDR, SCOR, rossmann fold; HET: NAP; 2.30A {Pseudomonas aeruginosa} PDB: 3lf1_A*
Probab=20.72 E-value=1.1e+02 Score=27.10 Aligned_cols=33 Identities=9% Similarity=0.023 Sum_probs=24.5
Q ss_pred ceEEEEeeccccccccCcHHHHHhHHHHHHHHCCCeEEEEee
Q 011163 9 FHIIHICTEMDPLVSIGSLASYVTGLSGALQRKGHLVEVILP 50 (492)
Q Consensus 9 mkIl~v~~~~~p~~~~GG~~~~~~~l~~~L~~~Gh~V~vi~~ 50 (492)
.|+++||- ..||+| ..+++.|.++|++|.++..
T Consensus 8 ~k~~lVTG------as~GIG---~aia~~l~~~G~~V~~~~r 40 (265)
T 3lf2_A 8 EAVAVVTG------GSSGIG---LATVELLLEAGAAVAFCAR 40 (265)
T ss_dssp TCEEEEET------CSSHHH---HHHHHHHHHTTCEEEEEES
T ss_pred CCEEEEeC------CCChHH---HHHHHHHHHCCCEEEEEeC
Confidence 46777774 347777 4678889999999887754
No 472
>3v2g_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, protein structure initiati nysgrc; 2.30A {Sinorhizobium meliloti}
Probab=20.71 E-value=83 Score=28.16 Aligned_cols=32 Identities=9% Similarity=0.162 Sum_probs=24.3
Q ss_pred eEEEEeeccccccccCcHHHHHhHHHHHHHHCCCeEEEEee
Q 011163 10 HIIHICTEMDPLVSIGSLASYVTGLSGALQRKGHLVEVILP 50 (492)
Q Consensus 10 kIl~v~~~~~p~~~~GG~~~~~~~l~~~L~~~Gh~V~vi~~ 50 (492)
|+++||- ..||+| ..+++.|.++|++|.++..
T Consensus 32 k~~lVTG------as~GIG---~aia~~la~~G~~V~~~~~ 63 (271)
T 3v2g_A 32 KTAFVTG------GSRGIG---AAIAKRLALEGAAVALTYV 63 (271)
T ss_dssp CEEEEET------TTSHHH---HHHHHHHHHTTCEEEEEES
T ss_pred CEEEEeC------CCcHHH---HHHHHHHHHCCCEEEEEeC
Confidence 6777774 346777 5788899999999987754
No 473
>4eso_A Putative oxidoreductase; NADP, structural genomics, PSI-biology, NEW structural genomics research consortium, nysgrc; HET: MSE NAP; 1.91A {Sinorhizobium meliloti} PDB: 3vc7_A
Probab=20.60 E-value=1.1e+02 Score=26.98 Aligned_cols=32 Identities=9% Similarity=-0.048 Sum_probs=24.4
Q ss_pred eEEEEeeccccccccCcHHHHHhHHHHHHHHCCCeEEEEee
Q 011163 10 HIIHICTEMDPLVSIGSLASYVTGLSGALQRKGHLVEVILP 50 (492)
Q Consensus 10 kIl~v~~~~~p~~~~GG~~~~~~~l~~~L~~~Gh~V~vi~~ 50 (492)
|.++||- ..||+| ..++++|.++|++|.++..
T Consensus 9 k~~lVTG------as~gIG---~a~a~~l~~~G~~V~~~~r 40 (255)
T 4eso_A 9 KKAIVIG------GTHGMG---LATVRRLVEGGAEVLLTGR 40 (255)
T ss_dssp CEEEEET------CSSHHH---HHHHHHHHHTTCEEEEEES
T ss_pred CEEEEEC------CCCHHH---HHHHHHHHHCCCEEEEEeC
Confidence 6667774 357777 4688999999999987764
No 474
>3a10_A Response regulator; phosphoacceptor, signaling protein; HET: MSE PG4; 1.63A {Thermotoga maritima} PDB: 3a0r_B* 3a0u_A*
Probab=20.59 E-value=2.4e+02 Score=20.26 Aligned_cols=107 Identities=10% Similarity=0.027 Sum_probs=57.9
Q ss_pred EEEEEecCCChhHHHHHHHHHHHhCCCeEEEEeccCHHHHHHHHh--cCCEEEECCC-CCCCchHHHHHhh---cCCceE
Q 011163 338 QFVFTGTNKLPSASRALVSFQEELKDGIVIFVDSYDDALLHLIFS--GSDIILCHSF-HDPLLQVPLKALK---YGAAPI 411 (492)
Q Consensus 338 ~lvivG~g~~~~~~~~l~~~~~~~~~~~v~~~~~~~~~~~~~~~~--~adi~v~pS~-~E~~glv~lEAma---~G~PvV 411 (492)
+++|+.+ ++...+.++...+..+ -.+.. ..+.++....+. ..|++++=-. .+..|+.+++.+. ..+|+|
T Consensus 3 ~ilivdd--~~~~~~~l~~~l~~~~-~~v~~--~~~~~~a~~~~~~~~~dlvl~D~~l~~~~g~~~~~~l~~~~~~~~ii 77 (116)
T 3a10_A 3 RILVVDD--EPNIRELLKEELQEEG-YEIDT--AENGEEALKKFFSGNYDLVILDIEMPGISGLEVAGEIRKKKKDAKII 77 (116)
T ss_dssp EEEEECS--CHHHHHHHHHHHHHTT-CEEEE--ESSHHHHHHHHHHSCCSEEEECSCCSSSCHHHHHHHHHHHCTTCCEE
T ss_pred EEEEEeC--CHHHHHHHHHHHHHCC-CEEEE--eCCHHHHHHHHhcCCCCEEEEECCCCCCCHHHHHHHHHccCCCCeEE
Confidence 4566663 3445556666555542 34432 223333223322 3577776543 2345666666553 356777
Q ss_pred EEecCCCcccccccccccccceeeeeecCCCHHHHHHHHHHHh
Q 011163 412 AVTSSDIEFRHFAEFDHESTRFSRFISSTFGNISLSQALEEIK 454 (492)
Q Consensus 412 ~~~~~~gg~~e~v~~~~~~~g~~G~~~~~~~~~~l~~ai~~~~ 454 (492)
+... ..-.+ .. ....|..+|+..|.+.+.|..++..++
T Consensus 78 ~~s~--~~~~~-~~--~~~~g~~~~l~Kp~~~~~l~~~i~~~~ 115 (116)
T 3a10_A 78 LLTA--YSHYR-SD--MSSWAADEYVVKSFNFDELKEKVKKLL 115 (116)
T ss_dssp EEES--CGGGG-GC--GGGGGSSEEEECCSSTHHHHHHHHHHT
T ss_pred EEEC--CcchH-HH--HHhccccceEECCCCHHHHHHHHHHHh
Confidence 6543 11111 11 111356789999999999999888764
No 475
>3vtz_A Glucose 1-dehydrogenase; rossmann fold, oxidoreductase, NAD binding; 2.30A {Thermoplasma volcanium}
Probab=20.56 E-value=1e+02 Score=27.55 Aligned_cols=35 Identities=14% Similarity=0.100 Sum_probs=25.5
Q ss_pred CceEEEEeeccccccccCcHHHHHhHHHHHHHHCCCeEEEEeec
Q 011163 8 GFHIIHICTEMDPLVSIGSLASYVTGLSGALQRKGHLVEVILPK 51 (492)
Q Consensus 8 ~mkIl~v~~~~~p~~~~GG~~~~~~~l~~~L~~~Gh~V~vi~~~ 51 (492)
.-|.++||- ..||+| ..+++.|.++|++|.++...
T Consensus 13 ~~k~vlVTG------as~GIG---~aia~~l~~~G~~V~~~~r~ 47 (269)
T 3vtz_A 13 TDKVAIVTG------GSSGIG---LAVVDALVRYGAKVVSVSLD 47 (269)
T ss_dssp TTCEEEESS------TTSHHH---HHHHHHHHHTTCEEEEEESC
T ss_pred CCCEEEEeC------CCCHHH---HHHHHHHHHCCCEEEEEeCC
Confidence 346667664 357777 46788999999999887643
No 476
>3st7_A Capsular polysaccharide synthesis enzyme CAP5F; rossmann fold, cupid domain, short-chain dehydrogenase/reduc NADPH; 2.45A {Staphylococcus aureus} PDB: 2zkl_A 3vhr_A
Probab=20.48 E-value=54 Score=30.86 Aligned_cols=32 Identities=13% Similarity=0.142 Sum_probs=21.6
Q ss_pred ceEEEEeeccccccccCcHHHHHhHHHHHHHHCCC-eEEEEee
Q 011163 9 FHIIHICTEMDPLVSIGSLASYVTGLSGALQRKGH-LVEVILP 50 (492)
Q Consensus 9 mkIl~v~~~~~p~~~~GG~~~~~~~l~~~L~~~Gh-~V~vi~~ 50 (492)
|||+++.. +|++| ..|++.|.++|+ +|..+..
T Consensus 1 M~VlVtGa-------tG~iG---~~l~~~L~~~g~~~v~~~d~ 33 (369)
T 3st7_A 1 MNIVITGA-------KGFVG---KNLKADLTSTTDHHIFEVHR 33 (369)
T ss_dssp CEEEEETT-------TSHHH---HHHHHHHHHHCCCEEEECCT
T ss_pred CEEEEECC-------CCHHH---HHHHHHHHhCCCCEEEEECC
Confidence 78765332 35555 567888999999 8766544
No 477
>3dm5_A SRP54, signal recognition 54 kDa protein; protein-RNA, signal recognition particle, SRP-GTPase, protein targeting, cytoplasm, GTP-binding; HET: GDP; 2.51A {Pyrococcus furiosus}
Probab=20.46 E-value=5.9e+02 Score=24.67 Aligned_cols=157 Identities=14% Similarity=0.097 Sum_probs=79.3
Q ss_pred HHHHHHHHHhHcCcEEEEEecCC----ChhHHHHHHHHHHHhCCCeEEEEecc----CH-HHHHHHHhcCCE--EEECCC
Q 011163 324 NLKAVVRGAKMRGIQFVFTGTNK----LPSASRALVSFQEELKDGIVIFVDSY----DD-ALLHLIFSGSDI--ILCHSF 392 (492)
Q Consensus 324 ~li~a~~~l~~~~~~lvivG~g~----~~~~~~~l~~~~~~~~~~~v~~~~~~----~~-~~~~~~~~~adi--~v~pS~ 392 (492)
.+-++++.+...+..++|+=..+ +..+..+++.+.....++.+.++..- +. +....+-...++ +|+.-.
T Consensus 170 i~~~al~~a~~~~~DvVIIDTaGrl~~d~~lm~el~~i~~~~~pd~vlLVvDA~~gq~a~~~a~~f~~~~~i~gVIlTKl 249 (443)
T 3dm5_A 170 LAKEGVDYFKSKGVDIIIVDTAGRHKEDKALIEEMKQISNVIHPHEVILVIDGTIGQQAYNQALAFKEATPIGSIIVTKL 249 (443)
T ss_dssp HHHHHHHHHHHTTCSEEEEECCCCSSCCHHHHHHHHHHHHHHCCSEEEEEEEGGGGGGHHHHHHHHHHSCTTEEEEEECC
T ss_pred HHHHHHHHHHhCCCCEEEEECCCcccchHHHHHHHHHHHHhhcCceEEEEEeCCCchhHHHHHHHHHhhCCCeEEEEECC
Confidence 33455555555456666663211 23445555555444433555544322 11 222223223443 555543
Q ss_pred CC-CCchHHHHH-hhcCCceEEEecCCCcccccccccccccceeeeeecCCCHHHHHHHHHHHhcCHHHHHHHHHHHHhc
Q 011163 393 HD-PLLQVPLKA-LKYGAAPIAVTSSDIEFRHFAEFDHESTRFSRFISSTFGNISLSQALEEIKNNPLSWKRKIKDAMLQ 470 (492)
Q Consensus 393 ~E-~~glv~lEA-ma~G~PvV~~~~~~gg~~e~v~~~~~~~g~~G~~~~~~~~~~l~~ai~~~~~~~~~~~~~~~~a~~~ 470 (492)
.+ .-|-.++++ ...|+|+.-..+| -++.++-.... +....-++..+|..+|.+..+...++.+...++.+.-...
T Consensus 250 D~~~~gG~~ls~~~~~g~PI~fig~G-e~vddL~~f~~--~~~~~~llg~gd~~~l~e~~~~~~~~~~~~~~~~~k~~~~ 326 (443)
T 3dm5_A 250 DGSAKGGGALSAVAATGAPIKFIGTG-EKIDDIEPFDP--PRFVSRLLGLGDIQGLLEKFKELEKEVEIKEEDIERFLRG 326 (443)
T ss_dssp SSCSSHHHHHHHHHTTCCCEEEEECS-SSTTCEEECCH--HHHHHHHTTTTCHHHHHHHHHHHHTTHHHHHHHHHHHHTT
T ss_pred CCcccccHHHHHHHHHCCCEEEEEcC-CChHHhhhCCH--HHHHHHHcCCCcHHHHHHHHHHhhhhhHHHHHHHHHHhhC
Confidence 22 222223332 3589988755551 23333321111 1112346678899999999999876554111355444456
Q ss_pred cCCchhhHHHHHHH
Q 011163 471 DFSWDADCNDIHIS 484 (492)
Q Consensus 471 ~fsw~~~a~~~~~~ 484 (492)
+|+.+.+-+|+ ..
T Consensus 327 ~f~l~d~~~q~-~~ 339 (443)
T 3dm5_A 327 KFTLKDMYAQL-EA 339 (443)
T ss_dssp CCCHHHHHHHH-HH
T ss_pred CcCHHHHHHHH-HH
Confidence 79999998885 53
No 478
>3ksu_A 3-oxoacyl-acyl carrier protein reductase; structural genomics, PSI-2, dehydrogenase, protein structure initiative; 2.30A {Oenococcus oeni psu-1}
Probab=20.40 E-value=88 Score=27.76 Aligned_cols=33 Identities=12% Similarity=0.051 Sum_probs=25.0
Q ss_pred ceEEEEeeccccccccCcHHHHHhHHHHHHHHCCCeEEEEee
Q 011163 9 FHIIHICTEMDPLVSIGSLASYVTGLSGALQRKGHLVEVILP 50 (492)
Q Consensus 9 mkIl~v~~~~~p~~~~GG~~~~~~~l~~~L~~~Gh~V~vi~~ 50 (492)
-|+++||- ..||+| ..+++.|.++|++|.++..
T Consensus 11 ~k~vlVTG------as~GIG---~aia~~la~~G~~V~~~~r 43 (262)
T 3ksu_A 11 NKVIVIAG------GIKNLG---ALTAKTFALESVNLVLHYH 43 (262)
T ss_dssp TCEEEEET------CSSHHH---HHHHHHHTTSSCEEEEEES
T ss_pred CCEEEEEC------CCchHH---HHHHHHHHHCCCEEEEEec
Confidence 37777774 347777 5678899999999988754
No 479
>1gee_A Glucose 1-dehydrogenase; short-chain dehydrogenase/reductase, oxidoreductase; HET: NAD; 1.60A {Bacillus megaterium} SCOP: c.2.1.2 PDB: 1rwb_A* 1gco_A* 1g6k_A* 3aus_A 3aut_A* 3auu_A*
Probab=20.40 E-value=95 Score=27.29 Aligned_cols=24 Identities=13% Similarity=0.021 Sum_probs=19.1
Q ss_pred cCcHHHHHhHHHHHHHHCCCeEEEEee
Q 011163 24 IGSLASYVTGLSGALQRKGHLVEVILP 50 (492)
Q Consensus 24 ~GG~~~~~~~l~~~L~~~Gh~V~vi~~ 50 (492)
.||+| ..++++|.++|++|.++..
T Consensus 16 sggiG---~~~a~~l~~~G~~V~~~~r 39 (261)
T 1gee_A 16 STGLG---KSMAIRFATEKAKVVVNYR 39 (261)
T ss_dssp SSHHH---HHHHHHHHHTTCEEEEEES
T ss_pred CChHH---HHHHHHHHHCCCEEEEEcC
Confidence 46676 5778899999999888764
No 480
>4b4t_W RPN10, 26S proteasome regulatory subunit RPN10; hydrolase, AAA-atpases, protein degradation, ubiquitin-prote pathway; 7.40A {Saccharomyces cerevisiae}
Probab=20.37 E-value=1.8e+02 Score=26.21 Aligned_cols=54 Identities=11% Similarity=0.131 Sum_probs=37.0
Q ss_pred ceEEEEEec-cccccCHHHHHHHHHHHhHcCcEEEEEecCCChhHHHHHHHHHHHhC
Q 011163 307 TIVVGCIFS-DVSDVFLENLKAVVRGAKMRGIQFVFTGTNKLPSASRALVSFQEELK 362 (492)
Q Consensus 307 ~~~i~~~gr-l~~~Kg~~~li~a~~~l~~~~~~lvivG~g~~~~~~~~l~~~~~~~~ 362 (492)
..+|++++. ... .-..++++++++++.++.+-++|-|.+..-.+.++++++..+
T Consensus 108 ~rIIlf~ds~~~~--~~~~l~~lak~lkk~gI~v~vIgFG~~~~n~~kLe~l~~~~N 162 (268)
T 4b4t_W 108 QRIVAFVCSPISD--SRDELIRLAKTLKKNNVAVDIINFGEIEQNTELLDEFIAAVN 162 (268)
T ss_dssp EEEEEEECSCCSS--CHHHHHHHHHHHHHHTEEEEEEEESSCCSSCCHHHHHHHHHC
T ss_pred eEEEEEECCCCCC--CHHHHHHHHHHHHHcCCEEEEEEeCCCccchHHHHHHHHHhc
Confidence 346677755 333 345789999999988999999987743333456777777654
No 481
>1yio_A Response regulatory protein; transcription regulation, DNA binding protein; 2.20A {Pseudomonas fluorescens} SCOP: a.4.6.2 c.23.1.1 PDB: 1zn2_A
Probab=20.34 E-value=3.6e+02 Score=22.13 Aligned_cols=111 Identities=10% Similarity=-0.101 Sum_probs=61.7
Q ss_pred cEEEEEecCCChhHHHHHHHHHHHhCCCeEEEEeccCHHHHHHHHh--cCCEEEECCC-CCCCchHHHHHhh---cCCce
Q 011163 337 IQFVFTGTNKLPSASRALVSFQEELKDGIVIFVDSYDDALLHLIFS--GSDIILCHSF-HDPLLQVPLKALK---YGAAP 410 (492)
Q Consensus 337 ~~lvivG~g~~~~~~~~l~~~~~~~~~~~v~~~~~~~~~~~~~~~~--~adi~v~pS~-~E~~glv~lEAma---~G~Pv 410 (492)
.+++|+.+ ++...+.++...+..+ -.|.. ..+.++....+. ..|++++=-. -+.-|+-+++.+. .++|+
T Consensus 5 ~~ilivdd--~~~~~~~l~~~L~~~g-~~v~~--~~~~~~al~~~~~~~~dlvl~D~~lp~~~g~~~~~~l~~~~~~~~i 79 (208)
T 1yio_A 5 PTVFVVDD--DMSVREGLRNLLRSAG-FEVET--FDCASTFLEHRRPEQHGCLVLDMRMPGMSGIELQEQLTAISDGIPI 79 (208)
T ss_dssp CEEEEECS--CHHHHHHHHHHHHTTT-CEEEE--ESSHHHHHHHCCTTSCEEEEEESCCSSSCHHHHHHHHHHTTCCCCE
T ss_pred CEEEEEcC--CHHHHHHHHHHHHhCC-ceEEE--cCCHHHHHHhhhccCCCEEEEeCCCCCCCHHHHHHHHHhcCCCCCE
Confidence 46677763 3445555665555432 33332 233333333333 2467665432 3456776666654 46788
Q ss_pred EEEecCCCcccccccccccccceeeeeecCCCHHHHHHHHHHHhc
Q 011163 411 IAVTSSDIEFRHFAEFDHESTRFSRFISSTFGNISLSQALEEIKN 455 (492)
Q Consensus 411 V~~~~~~gg~~e~v~~~~~~~g~~G~~~~~~~~~~l~~ai~~~~~ 455 (492)
|+... ..-.+.+... ...|..||+..|.+++.|.++|..++.
T Consensus 80 i~ls~--~~~~~~~~~a-~~~Ga~~~l~Kp~~~~~L~~~i~~~~~ 121 (208)
T 1yio_A 80 VFITA--HGDIPMTVRA-MKAGAIEFLPKPFEEQALLDAIEQGLQ 121 (208)
T ss_dssp EEEES--CTTSCCCHHH-HHTTEEEEEESSCCHHHHHHHHHHHHH
T ss_pred EEEeC--CCCHHHHHHH-HHCCCcEEEeCCCCHHHHHHHHHHHHh
Confidence 77654 2222222111 114667899999999999999988764
No 482
>2ew8_A (S)-1-phenylethanol dehydrogenase; transferase; 2.10A {Azoarcus SP} SCOP: c.2.1.2 PDB: 2ewm_A*
Probab=20.29 E-value=1.2e+02 Score=26.58 Aligned_cols=33 Identities=6% Similarity=0.100 Sum_probs=23.9
Q ss_pred eEEEEeeccccccccCcHHHHHhHHHHHHHHCCCeEEEEeec
Q 011163 10 HIIHICTEMDPLVSIGSLASYVTGLSGALQRKGHLVEVILPK 51 (492)
Q Consensus 10 kIl~v~~~~~p~~~~GG~~~~~~~l~~~L~~~Gh~V~vi~~~ 51 (492)
|+++||- ..||+| ..+++.|.++|++|.++...
T Consensus 8 k~vlVTG------as~gIG---~~ia~~l~~~G~~V~~~~r~ 40 (249)
T 2ew8_A 8 KLAVITG------GANGIG---RAIAERFAVEGADIAIADLV 40 (249)
T ss_dssp CEEEEET------TTSHHH---HHHHHHHHHTTCEEEEEESS
T ss_pred CEEEEeC------CCcHHH---HHHHHHHHHCCCEEEEEcCC
Confidence 5556663 357777 46788899999999887643
No 483
>2ekp_A 2-deoxy-D-gluconate 3-dehydrogenase; structural genomics, NPPSFA, nation project on protein structural and functional analyses; HET: NAD; 1.15A {Thermus thermophilus} PDB: 1x1e_A* 2ekq_A
Probab=20.16 E-value=1e+02 Score=26.73 Aligned_cols=33 Identities=12% Similarity=0.151 Sum_probs=23.4
Q ss_pred eEEEEeeccccccccCcHHHHHhHHHHHHHHCCCeEEEEeec
Q 011163 10 HIIHICTEMDPLVSIGSLASYVTGLSGALQRKGHLVEVILPK 51 (492)
Q Consensus 10 kIl~v~~~~~p~~~~GG~~~~~~~l~~~L~~~Gh~V~vi~~~ 51 (492)
|.++||- ..||+| ..+++.|.++|++|.++...
T Consensus 3 k~vlVTG------as~giG---~~~a~~l~~~G~~V~~~~r~ 35 (239)
T 2ekp_A 3 RKALVTG------GSRGIG---RAIAEALVARGYRVAIASRN 35 (239)
T ss_dssp CEEEEET------TTSHHH---HHHHHHHHHTTCEEEEEESS
T ss_pred CEEEEeC------CCcHHH---HHHHHHHHHCCCEEEEEeCC
Confidence 4455553 346777 46788899999999887643
No 484
>3ioy_A Short-chain dehydrogenase/reductase SDR; structural genomics, oxidoreductase, PSI-2, protein structure initiative; 1.90A {Novosphingobium aromaticivorans DSM12444}
Probab=20.15 E-value=98 Score=28.50 Aligned_cols=34 Identities=15% Similarity=0.138 Sum_probs=25.3
Q ss_pred ceEEEEeeccccccccCcHHHHHhHHHHHHHHCCCeEEEEeec
Q 011163 9 FHIIHICTEMDPLVSIGSLASYVTGLSGALQRKGHLVEVILPK 51 (492)
Q Consensus 9 mkIl~v~~~~~p~~~~GG~~~~~~~l~~~L~~~Gh~V~vi~~~ 51 (492)
.|.++||- .+||+|. .+++.|.++|++|.+....
T Consensus 8 ~k~vlVTG------as~gIG~---~la~~l~~~G~~Vv~~~r~ 41 (319)
T 3ioy_A 8 GRTAFVTG------GANGVGI---GLVRQLLNQGCKVAIADIR 41 (319)
T ss_dssp TCEEEEET------TTSTHHH---HHHHHHHHTTCEEEEEESC
T ss_pred CCEEEEcC------CchHHHH---HHHHHHHHCCCEEEEEECC
Confidence 35667774 4588885 6788999999998777643
No 485
>2nwq_A Probable short-chain dehydrogenase; oxidoreductase; 2.30A {Pseudomonas aeruginosa}
Probab=20.10 E-value=87 Score=28.06 Aligned_cols=32 Identities=6% Similarity=0.087 Sum_probs=24.2
Q ss_pred eEEEEeeccccccccCcHHHHHhHHHHHHHHCCCeEEEEee
Q 011163 10 HIIHICTEMDPLVSIGSLASYVTGLSGALQRKGHLVEVILP 50 (492)
Q Consensus 10 kIl~v~~~~~p~~~~GG~~~~~~~l~~~L~~~Gh~V~vi~~ 50 (492)
|.++||- ..||+|. .+++.|.++|++|.++..
T Consensus 22 k~vlVTG------as~gIG~---aia~~La~~G~~V~~~~r 53 (272)
T 2nwq_A 22 STLFITG------ATSGFGE---ACARRFAEAGWSLVLTGR 53 (272)
T ss_dssp CEEEESS------TTTSSHH---HHHHHHHHTTCEEEEEES
T ss_pred cEEEEeC------CCCHHHH---HHHHHHHHCCCEEEEEEC
Confidence 5666664 3578875 678889999999988764
No 486
>2nzw_A Alpha1,3-fucosyltransferase; FUCT, GT 10; 1.90A {Helicobacter pylori} SCOP: c.87.1.11 PDB: 2nzx_A* 2nzy_A*
Probab=20.05 E-value=1.9e+02 Score=27.44 Aligned_cols=56 Identities=9% Similarity=-0.127 Sum_probs=37.8
Q ss_pred HHHhhcCCceEEEecCCCcccccccccccccceeeeee-cCCCHHHHHHHHHHHhcCHHHHHHHH
Q 011163 401 LKALKYGAAPIAVTSSDIEFRHFAEFDHESTRFSRFIS-STFGNISLSQALEEIKNNPLSWKRKI 464 (492)
Q Consensus 401 lEAma~G~PvV~~~~~~gg~~e~v~~~~~~~g~~G~~~-~~~~~~~l~~ai~~~~~~~~~~~~~~ 464 (492)
..|+.+|+-||+... ..+.+++.. .+-+.+ +-.++++|++-|..+.+|++.+.+.-
T Consensus 252 ~~al~~g~VPI~~G~--~~~~~~~Pp------~SfI~~~dF~s~~~La~yL~~L~~n~~~Y~~y~ 308 (371)
T 2nzw_A 252 IDAYFSHTIPIYWGS--PSVAKDFNP------KSFVNVHDFKNFDEAIDYIKYLHTHKNAYLDML 308 (371)
T ss_dssp HHHHHTTCEEEEESC--TTGGGTSCG------GGSEEGGGSSSHHHHHHHHHHHHTCHHHHHHHH
T ss_pred HHHHhCCeEEEEECC--CchhhhCCC------CceEEcccCCCHHHHHHHHHHHhcCHHHHHHHH
Confidence 479999998888543 333333331 111223 45688999999999999998887654
No 487
>1iy8_A Levodione reductase; oxidoreductase; HET: NAD; 1.60A {Leifsonia aquatica} SCOP: c.2.1.2
Probab=20.05 E-value=1e+02 Score=27.35 Aligned_cols=32 Identities=13% Similarity=0.147 Sum_probs=23.6
Q ss_pred eEEEEeeccccccccCcHHHHHhHHHHHHHHCCCeEEEEee
Q 011163 10 HIIHICTEMDPLVSIGSLASYVTGLSGALQRKGHLVEVILP 50 (492)
Q Consensus 10 kIl~v~~~~~p~~~~GG~~~~~~~l~~~L~~~Gh~V~vi~~ 50 (492)
|+++||- ..||+|. .+++.|.++|++|.++..
T Consensus 14 k~vlVTG------as~gIG~---~ia~~l~~~G~~V~~~~r 45 (267)
T 1iy8_A 14 RVVLITG------GGSGLGR---ATAVRLAAEGAKLSLVDV 45 (267)
T ss_dssp CEEEEET------TTSHHHH---HHHHHHHHTTCEEEEEES
T ss_pred CEEEEEC------CCCHHHH---HHHHHHHHCCCEEEEEeC
Confidence 5666664 3477774 678889999999988764
Done!