Query 011164
Match_columns 492
No_of_seqs 408 out of 3866
Neff 9.0
Searched_HMMs 29240
Date Mon Mar 25 22:08:04 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/011164.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/011164hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3jxv_A 70 kDa peptidyl-prolyl 100.0 6.5E-68 2.2E-72 530.4 28.0 354 28-383 2-355 (356)
2 1kt0_A FKBP51, 51 kDa FK506-bi 100.0 3.5E-50 1.2E-54 417.8 36.9 329 35-491 29-360 (457)
3 1q1c_A FK506-binding protein 4 100.0 1.5E-40 5.2E-45 319.6 32.7 234 30-389 42-280 (280)
4 3jxv_A 70 kDa peptidyl-prolyl 100.0 3.5E-35 1.2E-39 293.5 27.1 220 35-261 125-354 (356)
5 2if4_A ATFKBP42; FKBP-like, al 100.0 6.7E-33 2.3E-37 276.4 20.1 219 269-491 48-273 (338)
6 1p5q_A FKBP52, FK506-binding p 100.0 6.8E-30 2.3E-34 254.5 26.2 218 263-490 18-238 (336)
7 1yat_A FK506 binding protein; 99.9 2.6E-23 8.7E-28 172.6 15.4 110 34-143 3-112 (113)
8 3kz7_A FK506-binding protein 3 99.9 2.5E-23 8.6E-28 174.4 15.3 109 35-143 2-118 (119)
9 1r9h_A FKB-6, FK506 binding pr 99.9 1.9E-23 6.6E-28 178.6 14.6 112 35-146 12-123 (135)
10 3o5e_A Peptidyl-prolyl CIS-tra 99.9 2.5E-23 8.7E-28 179.8 15.3 110 35-144 33-142 (144)
11 3o5q_A Peptidyl-prolyl CIS-tra 99.9 2.2E-23 7.4E-28 176.8 14.3 111 35-145 17-127 (128)
12 3b7x_A FK506-binding protein 6 99.9 4.3E-24 1.5E-28 182.4 9.9 126 18-144 5-133 (134)
13 3o5e_A Peptidyl-prolyl CIS-tra 99.9 3.8E-23 1.3E-27 178.7 15.3 116 262-382 25-142 (144)
14 2f4e_A ATFKBP42; FKBP-like, al 99.9 3.1E-23 1.1E-27 185.7 15.2 129 268-400 47-180 (180)
15 3kz7_A FK506-binding protein 3 99.9 8.2E-23 2.8E-27 171.3 15.7 112 269-382 3-119 (119)
16 3o5q_A Peptidyl-prolyl CIS-tra 99.9 7E-23 2.4E-27 173.7 14.7 115 264-383 11-127 (128)
17 2ppn_A FK506-binding protein 1 99.9 5.9E-23 2E-27 168.8 13.7 106 38-143 1-106 (107)
18 2y78_A Peptidyl-prolyl CIS-tra 99.9 9.8E-23 3.4E-27 173.4 15.4 110 33-143 24-133 (133)
19 2lkn_A AH receptor-interacting 99.9 1.8E-23 6.1E-28 182.5 10.7 117 33-150 6-163 (165)
20 2f4e_A ATFKBP42; FKBP-like, al 99.9 1.6E-22 5.6E-27 181.0 16.5 125 23-148 35-163 (180)
21 1kt0_A FKBP51, 51 kDa FK506-bi 99.9 3.8E-24 1.3E-28 221.8 6.1 115 264-383 23-139 (457)
22 2lgo_A FKBP; infectious diseas 99.9 1.1E-22 3.7E-27 172.6 13.4 113 31-143 16-130 (130)
23 4dip_A Peptidyl-prolyl CIS-tra 99.9 3.7E-22 1.2E-26 168.7 14.9 111 33-145 8-123 (125)
24 1r9h_A FKB-6, FK506 binding pr 99.9 3.1E-22 1.1E-26 171.1 14.4 117 263-384 5-123 (135)
25 2vn1_A 70 kDa peptidylprolyl i 99.9 6.2E-22 2.1E-26 168.2 16.1 112 34-145 12-127 (129)
26 4dip_A Peptidyl-prolyl CIS-tra 99.9 2.7E-22 9.1E-27 169.6 13.4 115 265-384 7-124 (125)
27 2lkn_A AH receptor-interacting 99.9 5.3E-23 1.8E-27 179.5 9.1 117 267-386 7-161 (165)
28 2if4_A ATFKBP42; FKBP-like, al 99.9 3.6E-22 1.2E-26 198.7 16.4 118 27-145 39-160 (338)
29 3b7x_A FK506-binding protein 6 99.9 1.1E-22 3.9E-27 173.6 10.3 115 262-382 18-133 (134)
30 1yat_A FK506 binding protein; 99.9 8.3E-22 2.8E-26 163.5 15.0 109 269-382 5-113 (113)
31 2ppn_A FK506-binding protein 1 99.9 5.7E-22 2E-26 162.9 13.9 107 271-382 1-107 (107)
32 1jvw_A Macrophage infectivity 99.9 3.6E-22 1.2E-26 175.9 12.7 111 32-145 32-143 (167)
33 3uf8_A Ubiquitin-like protein 99.9 8.6E-22 2.9E-26 180.5 15.2 110 33-143 100-209 (209)
34 2awg_A 38 kDa FK-506 binding p 99.9 1.7E-21 5.7E-26 162.8 15.4 112 262-382 5-117 (118)
35 3oe2_A Peptidyl-prolyl CIS-tra 99.9 9.1E-22 3.1E-26 179.7 14.6 106 33-144 113-218 (219)
36 2vn1_A 70 kDa peptidylprolyl i 99.9 1.9E-21 6.7E-26 165.1 15.6 115 264-383 10-127 (129)
37 1jvw_A Macrophage infectivity 99.9 1.4E-21 4.8E-26 172.2 14.7 121 267-397 34-155 (167)
38 2y78_A Peptidyl-prolyl CIS-tra 99.9 1.7E-21 5.6E-26 165.8 14.7 110 266-381 24-133 (133)
39 1u79_A FKBP-type peptidyl-prol 99.9 4.3E-22 1.5E-26 169.0 10.9 111 32-143 7-128 (129)
40 2jwx_A FKBP38NTD, FK506-bindin 99.9 3.2E-21 1.1E-25 167.9 16.4 110 33-146 38-150 (157)
41 1fd9_A Protein (macrophage inf 99.9 1.4E-21 4.9E-26 178.7 14.4 110 33-145 102-211 (213)
42 2awg_A 38 kDa FK-506 binding p 99.9 3.3E-21 1.1E-25 161.0 15.4 107 34-144 9-117 (118)
43 2jwx_A FKBP38NTD, FK506-bindin 99.9 2.3E-21 7.9E-26 168.8 14.7 115 263-386 36-152 (157)
44 2d9f_A FK506-binding protein 8 99.9 1.3E-21 4.5E-26 167.2 12.0 121 263-392 10-132 (135)
45 2lgo_A FKBP; infectious diseas 99.9 3.8E-21 1.3E-25 163.0 13.1 108 269-381 21-130 (130)
46 3uf8_A Ubiquitin-like protein 99.9 9.1E-21 3.1E-25 173.7 16.1 123 253-381 87-209 (209)
47 3oe2_A Peptidyl-prolyl CIS-tra 99.9 5.2E-21 1.8E-25 174.7 14.2 106 267-383 114-219 (219)
48 1q6h_A FKBP-type peptidyl-prol 99.9 7.6E-21 2.6E-25 175.1 15.1 107 33-143 117-223 (224)
49 2d9f_A FK506-binding protein 8 99.8 6.8E-21 2.3E-25 162.8 12.9 112 33-148 12-126 (135)
50 1u79_A FKBP-type peptidyl-prol 99.8 1.2E-20 4E-25 160.2 11.9 112 267-381 9-128 (129)
51 1fd9_A Protein (macrophage inf 99.8 2.2E-20 7.5E-25 170.8 14.1 110 266-383 102-211 (213)
52 2pbc_A FK506-binding protein 2 99.8 4.8E-20 1.6E-24 149.9 12.4 95 51-145 4-98 (102)
53 1q6h_A FKBP-type peptidyl-prol 99.8 1.3E-19 4.5E-24 166.8 14.8 106 268-382 119-224 (224)
54 2pbc_A FK506-binding protein 2 99.8 1.4E-19 4.8E-24 147.1 11.8 96 284-384 4-99 (102)
55 1q1c_A FK506-binding protein 4 99.8 3.3E-19 1.1E-23 171.1 16.3 117 263-384 42-160 (280)
56 4dt4_A FKBP-type 16 kDa peptid 99.8 1.1E-19 3.8E-24 159.3 7.3 133 52-193 24-159 (169)
57 2kr7_A FKBP-type peptidyl-prol 99.8 6.9E-19 2.4E-23 152.7 11.5 134 51-195 5-142 (151)
58 3prb_A FKBP-type peptidyl-prol 99.8 1.4E-19 4.9E-24 166.4 7.2 168 53-232 2-190 (231)
59 3pr9_A FKBP-type peptidyl-prol 99.8 1.7E-19 6E-24 156.6 6.3 132 53-196 2-147 (157)
60 1p5q_A FKBP52, FK506-binding p 99.8 3.8E-18 1.3E-22 169.4 15.5 111 29-145 17-131 (336)
61 1ix5_A FKBP; ppiase, isomerase 99.8 1.1E-19 3.6E-24 157.8 3.2 132 52-193 1-145 (151)
62 2kfw_A FKBP-type peptidyl-prol 99.8 1.3E-18 4.4E-23 156.5 9.1 132 53-194 3-136 (196)
63 2k8i_A SLYD, peptidyl-prolyl C 99.7 7.9E-18 2.7E-22 148.5 10.7 134 53-196 3-138 (171)
64 3cgm_A SLYD, peptidyl-prolyl C 99.7 3.1E-17 1.1E-21 142.9 7.1 129 53-196 3-134 (158)
65 4dt4_A FKBP-type 16 kDa peptid 99.6 1.3E-15 4.5E-20 133.4 10.4 72 285-358 24-95 (169)
66 3pr9_A FKBP-type peptidyl-prol 99.6 3.7E-15 1.3E-19 129.4 10.8 73 286-359 2-85 (157)
67 2kr7_A FKBP-type peptidyl-prol 99.6 1.4E-14 5E-19 125.4 12.3 72 284-358 5-77 (151)
68 1hxv_A Trigger factor; FKBP fo 99.6 2.7E-15 9.3E-20 123.3 7.2 85 51-143 28-112 (113)
69 1hxv_A Trigger factor; FKBP fo 99.6 5.4E-15 1.8E-19 121.6 8.6 85 284-382 28-113 (113)
70 2k8i_A SLYD, peptidyl-prolyl C 99.5 5E-14 1.7E-18 124.2 12.2 70 286-358 3-72 (171)
71 3prb_A FKBP-type peptidyl-prol 99.5 3E-14 1E-18 131.0 11.0 98 286-384 2-151 (231)
72 2kfw_A FKBP-type peptidyl-prol 99.5 3.9E-14 1.3E-18 127.3 11.3 70 286-358 3-72 (196)
73 1ix5_A FKBP; ppiase, isomerase 99.5 7.4E-15 2.5E-19 127.3 5.7 74 286-359 2-86 (151)
74 3cgm_A SLYD, peptidyl-prolyl C 99.4 3.5E-13 1.2E-17 117.2 10.3 65 286-358 3-67 (158)
75 3rkv_A Putative peptidylprolyl 99.4 3.7E-13 1.3E-17 118.1 6.7 99 392-490 4-105 (162)
76 2hr2_A Hypothetical protein; a 99.3 1.8E-12 6.1E-17 112.6 6.6 100 390-492 2-112 (159)
77 4gco_A Protein STI-1; structur 99.2 5.7E-12 2E-16 106.0 4.8 78 397-489 11-88 (126)
78 2fbn_A 70 kDa peptidylprolyl i 99.2 4.7E-11 1.6E-15 108.2 10.1 120 371-490 10-130 (198)
79 1w26_A Trigger factor, TF; cha 99.2 2.8E-11 9.5E-16 123.1 9.1 101 51-159 156-256 (432)
80 4gcn_A Protein STI-1; structur 99.1 3.6E-11 1.2E-15 101.2 4.1 76 395-485 4-79 (127)
81 1w26_A Trigger factor, TF; cha 99.1 3.9E-10 1.3E-14 114.6 12.2 88 284-384 156-243 (432)
82 1t11_A Trigger factor, TF; hel 99.1 9.6E-11 3.3E-15 117.5 6.0 101 51-159 159-259 (392)
83 1ihg_A Cyclophilin 40; ppiase 99.0 4.1E-10 1.4E-14 112.9 7.4 101 391-491 215-316 (370)
84 1t11_A Trigger factor, TF; hel 98.9 4E-10 1.4E-14 113.0 4.8 88 284-384 159-246 (392)
85 3upv_A Heat shock protein STI1 98.9 1.1E-09 3.9E-14 91.1 4.8 77 398-489 3-79 (126)
86 2l6j_A TPR repeat-containing p 98.7 1.1E-08 3.7E-13 82.5 5.6 77 398-489 3-85 (111)
87 3gyz_A Chaperone protein IPGC; 98.7 8.3E-09 2.8E-13 89.5 5.2 79 397-490 34-112 (151)
88 3sz7_A HSC70 cochaperone (SGT) 98.7 1.2E-08 4.1E-13 89.2 4.9 78 397-489 9-86 (164)
89 4gco_A Protein STI-1; structur 98.6 5.3E-08 1.8E-12 81.4 5.2 75 399-488 47-121 (126)
90 2v5f_A Prolyl 4-hydroxylase su 98.5 2.5E-07 8.6E-12 74.5 8.0 79 401-487 7-85 (104)
91 2vgx_A Chaperone SYCD; alterna 98.5 1E-07 3.5E-12 82.0 5.2 77 398-489 20-96 (148)
92 4ga2_A E3 SUMO-protein ligase 98.5 1.1E-07 3.7E-12 82.1 5.3 76 399-489 31-106 (150)
93 3q49_B STIP1 homology and U bo 98.5 9E-08 3.1E-12 80.2 4.5 76 399-489 9-84 (137)
94 2c2l_A CHIP, carboxy terminus 98.4 8.3E-08 2.9E-12 92.1 3.9 77 399-490 4-80 (281)
95 2xcb_A PCRH, regulatory protei 98.4 1.8E-07 6.1E-12 79.6 5.2 76 398-488 17-92 (142)
96 2kc7_A BFR218_protein; tetratr 98.4 2.1E-07 7.2E-12 73.4 5.2 69 403-486 4-73 (99)
97 1na3_A Designed protein CTPR2; 98.4 3.9E-07 1.3E-11 70.2 6.0 76 398-488 8-83 (91)
98 1hxi_A PEX5, peroxisome target 98.4 2.1E-07 7.1E-12 77.1 4.1 74 401-489 19-92 (121)
99 2dba_A Smooth muscle cell asso 98.4 4.6E-07 1.6E-11 76.5 6.1 80 398-489 27-106 (148)
100 1a17_A Serine/threonine protei 98.3 6.6E-07 2.3E-11 77.1 6.6 81 392-487 6-86 (166)
101 1elw_A TPR1-domain of HOP; HOP 98.3 6.2E-07 2.1E-11 72.1 5.0 73 398-485 3-75 (118)
102 3sz7_A HSC70 cochaperone (SGT) 98.3 5.7E-07 2E-11 78.3 5.1 77 399-490 45-121 (164)
103 3vtx_A MAMA; tetratricopeptide 98.3 5.5E-07 1.9E-11 79.7 4.6 67 401-482 109-175 (184)
104 2hr2_A Hypothetical protein; a 98.3 1.8E-06 6.3E-11 74.6 7.6 77 398-482 56-136 (159)
105 3urz_A Uncharacterized protein 98.2 2E-06 6.8E-11 78.2 7.5 89 399-487 4-93 (208)
106 3urz_A Uncharacterized protein 98.2 1.7E-06 5.9E-11 78.7 6.0 71 404-489 59-129 (208)
107 2lni_A Stress-induced-phosphop 98.2 9.2E-07 3.1E-11 73.0 3.7 90 398-487 15-123 (133)
108 3gyz_A Chaperone protein IPGC; 98.2 2.2E-06 7.6E-11 74.0 6.1 69 399-482 70-138 (151)
109 3fp2_A TPR repeat-containing p 98.2 9.9E-07 3.4E-11 91.5 4.4 88 387-489 13-100 (537)
110 2vyi_A SGTA protein; chaperone 98.1 2.5E-06 8.5E-11 69.8 5.8 93 394-486 7-118 (131)
111 3k9i_A BH0479 protein; putativ 98.1 3.7E-06 1.3E-10 68.6 6.7 73 397-484 25-97 (117)
112 3rkv_A Putative peptidylprolyl 98.1 1.2E-06 4.2E-11 75.9 3.7 73 398-485 62-134 (162)
113 4gyw_A UDP-N-acetylglucosamine 98.1 1.4E-06 4.7E-11 94.6 4.4 93 397-489 7-118 (723)
114 3ma5_A Tetratricopeptide repea 98.1 2.1E-06 7.2E-11 68.2 4.3 69 399-482 7-75 (100)
115 2kck_A TPR repeat; tetratricop 98.1 1.4E-06 4.7E-11 69.4 3.2 73 401-488 8-82 (112)
116 4gcn_A Protein STI-1; structur 98.1 1.9E-05 6.6E-10 65.6 10.2 74 399-480 42-115 (127)
117 1wao_1 Serine/threonine protei 98.1 6.2E-07 2.1E-11 92.8 0.9 75 398-487 5-79 (477)
118 4i17_A Hypothetical protein; T 98.1 2.6E-06 8.9E-11 78.1 4.8 75 400-488 8-82 (228)
119 1elr_A TPR2A-domain of HOP; HO 98.1 2.3E-06 7.7E-11 70.2 3.9 76 398-488 3-85 (131)
120 2xev_A YBGF; tetratricopeptide 98.0 3.8E-06 1.3E-10 69.2 5.1 68 402-481 5-72 (129)
121 4ga2_A E3 SUMO-protein ligase 98.0 1.5E-06 5.1E-11 74.8 2.6 69 406-489 4-72 (150)
122 1hxi_A PEX5, peroxisome target 98.0 5.1E-06 1.7E-10 68.6 5.8 70 399-483 51-120 (121)
123 1zu2_A Mitochondrial import re 98.0 3.8E-06 1.3E-10 72.5 5.0 70 398-482 35-125 (158)
124 2gw1_A Mitochondrial precursor 98.0 4.2E-06 1.4E-10 86.1 6.4 79 395-489 2-80 (514)
125 2vgx_A Chaperone SYCD; alterna 98.0 7E-06 2.4E-10 70.3 6.6 70 400-484 56-125 (148)
126 3upv_A Heat shock protein STI1 98.0 5.3E-06 1.8E-10 68.4 5.3 72 399-485 38-115 (126)
127 3vtx_A MAMA; tetratricopeptide 98.0 5E-06 1.7E-10 73.3 5.0 74 399-487 5-78 (184)
128 2xcb_A PCRH, regulatory protei 98.0 7.3E-06 2.5E-10 69.4 5.8 70 400-484 53-122 (142)
129 3k9i_A BH0479 protein; putativ 97.9 1.8E-06 6E-11 70.6 0.9 68 411-490 2-69 (117)
130 4gyw_A UDP-N-acetylglucosamine 97.9 4.7E-06 1.6E-10 90.4 4.5 92 399-490 43-153 (723)
131 2pl2_A Hypothetical conserved 97.9 3.5E-06 1.2E-10 77.2 2.9 75 400-489 6-80 (217)
132 2pl2_A Hypothetical conserved 97.9 6.9E-06 2.3E-10 75.1 4.6 73 401-489 120-192 (217)
133 2yhc_A BAMD, UPF0169 lipoprote 97.9 1.6E-05 5.4E-10 73.0 6.9 78 399-488 4-84 (225)
134 1elw_A TPR1-domain of HOP; HOP 97.9 1.3E-05 4.6E-10 64.1 5.7 74 400-488 39-112 (118)
135 2h6f_A Protein farnesyltransfe 97.9 4.7E-06 1.6E-10 83.5 3.3 89 400-488 132-240 (382)
136 2lni_A Stress-induced-phosphop 97.9 9.4E-06 3.2E-10 66.7 4.5 27 402-428 53-79 (133)
137 3gty_X Trigger factor, TF; cha 97.9 2.1E-05 7.3E-10 79.7 7.7 88 52-159 154-241 (433)
138 2fbn_A 70 kDa peptidylprolyl i 97.9 1.6E-05 5.3E-10 71.3 5.9 74 399-487 88-161 (198)
139 2h6f_A Protein farnesyltransfe 97.8 7.9E-06 2.7E-10 81.9 4.1 92 398-489 96-207 (382)
140 1zu2_A Mitochondrial import re 97.8 3.4E-06 1.2E-10 72.8 0.8 65 411-490 14-88 (158)
141 1hh8_A P67PHOX, NCF-2, neutrop 97.8 1.3E-05 4.4E-10 72.3 4.5 34 449-482 72-105 (213)
142 2dba_A Smooth muscle cell asso 97.8 2.2E-05 7.4E-10 65.9 5.6 73 399-486 65-137 (148)
143 1hh8_A P67PHOX, NCF-2, neutrop 97.8 1.6E-05 5.5E-10 71.6 5.0 74 398-489 5-78 (213)
144 2xev_A YBGF; tetratricopeptide 97.8 4.2E-05 1.4E-09 62.8 7.0 73 400-484 40-112 (129)
145 2vyi_A SGTA protein; chaperone 97.8 2.4E-05 8.2E-10 63.7 5.5 27 402-428 49-75 (131)
146 1pc2_A Mitochondria fission pr 97.8 6.5E-05 2.2E-09 64.1 8.0 69 404-485 37-108 (152)
147 4i17_A Hypothetical protein; T 97.8 4.7E-05 1.6E-09 69.5 7.5 83 399-489 76-160 (228)
148 1na0_A Designed protein CTPR3; 97.7 3.5E-05 1.2E-09 62.1 5.6 89 400-488 10-117 (125)
149 1ihg_A Cyclophilin 40; ppiase 97.7 2.5E-05 8.5E-10 77.9 5.5 74 399-487 273-346 (370)
150 2kat_A Uncharacterized protein 97.7 4.1E-05 1.4E-09 61.8 5.8 67 400-481 20-86 (115)
151 2kck_A TPR repeat; tetratricop 97.7 4.7E-05 1.6E-09 60.2 5.9 69 401-482 42-111 (112)
152 3gty_X Trigger factor, TF; cha 97.7 0.00015 5E-09 73.5 10.6 76 285-385 154-229 (433)
153 3uq3_A Heat shock protein STI1 97.7 4.2E-05 1.4E-09 70.5 5.8 75 399-488 139-213 (258)
154 3q49_B STIP1 homology and U bo 97.7 4.8E-05 1.6E-09 63.1 5.6 67 400-481 44-110 (137)
155 1na0_A Designed protein CTPR3; 97.7 5.6E-05 1.9E-09 60.9 5.7 27 402-428 46-72 (125)
156 1a17_A Serine/threonine protei 97.7 6.8E-05 2.3E-09 64.1 6.5 71 400-485 48-118 (166)
157 3qky_A Outer membrane assembly 97.6 8.6E-05 2.9E-09 69.4 7.5 78 399-488 15-95 (261)
158 1elr_A TPR2A-domain of HOP; HO 97.6 0.00011 3.9E-09 59.7 7.4 77 400-485 39-115 (131)
159 2e2e_A Formate-dependent nitri 97.6 5E-05 1.7E-09 66.4 5.4 84 399-482 44-149 (177)
160 3ieg_A DNAJ homolog subfamily 97.6 4.6E-05 1.6E-09 73.8 5.4 75 399-488 3-77 (359)
161 1xnf_A Lipoprotein NLPI; TPR, 97.6 6.1E-05 2.1E-09 70.3 5.7 76 398-488 42-117 (275)
162 3uq3_A Heat shock protein STI1 97.6 3.2E-05 1.1E-09 71.3 3.5 69 397-481 3-71 (258)
163 3u3w_A Transcriptional activat 97.6 0.00016 5.5E-09 69.0 8.6 76 398-481 154-229 (293)
164 2pzi_A Probable serine/threoni 97.6 3.9E-05 1.3E-09 82.9 4.3 74 401-489 435-508 (681)
165 1wao_1 Serine/threonine protei 97.5 7.1E-05 2.4E-09 77.2 5.9 75 399-488 40-114 (477)
166 1qqe_A Vesicular transport pro 97.5 0.00049 1.7E-08 65.7 10.6 76 399-483 117-193 (292)
167 3ieg_A DNAJ homolog subfamily 97.4 0.00032 1.1E-08 67.8 8.9 76 400-486 235-310 (359)
168 4eqf_A PEX5-related protein; a 97.4 6.6E-05 2.3E-09 73.7 4.0 72 401-487 67-138 (365)
169 3mkr_A Coatomer subunit epsilo 97.4 0.00013 4.5E-09 69.9 6.0 42 448-489 200-241 (291)
170 2qfc_A PLCR protein; TPR, HTH, 97.4 0.00049 1.7E-08 65.6 10.0 74 398-479 154-227 (293)
171 3u4t_A TPR repeat-containing p 97.4 6.4E-05 2.2E-09 70.2 3.6 73 402-489 77-149 (272)
172 4abn_A Tetratricopeptide repea 97.4 7.4E-05 2.5E-09 77.0 4.1 77 401-489 215-299 (474)
173 2vsy_A XCC0866; transferase, g 97.4 5.7E-05 1.9E-09 79.6 2.7 89 400-488 24-131 (568)
174 2pzi_A Probable serine/threoni 97.4 3.4E-05 1.2E-09 83.4 1.0 92 400-491 468-577 (681)
175 2y4t_A DNAJ homolog subfamily 97.4 0.00026 8.9E-09 71.3 7.4 76 400-486 258-333 (450)
176 4eqf_A PEX5-related protein; a 97.3 0.00015 5.3E-09 71.0 5.3 74 400-488 214-287 (365)
177 2y4t_A DNAJ homolog subfamily 97.3 0.00017 5.9E-09 72.6 5.8 76 397-487 24-99 (450)
178 2vq2_A PILW, putative fimbrial 97.3 0.00023 8E-09 63.8 5.8 72 399-485 8-79 (225)
179 1fch_A Peroxisomal targeting s 97.3 0.00014 4.8E-09 71.1 4.6 72 401-487 66-137 (368)
180 2fo7_A Synthetic consensus TPR 97.3 0.0002 6.7E-09 58.2 4.6 41 448-488 69-109 (136)
181 3ro3_A PINS homolog, G-protein 97.3 0.0012 4.3E-08 55.2 9.8 71 399-478 49-119 (164)
182 3hym_B Cell division cycle pro 97.3 8.9E-05 3E-09 71.0 2.7 74 401-489 238-311 (330)
183 2fo7_A Synthetic consensus TPR 97.3 0.00024 8.3E-09 57.7 5.0 34 448-481 103-136 (136)
184 3q15_A PSP28, response regulat 97.3 0.00037 1.3E-08 69.1 7.2 82 397-487 180-266 (378)
185 3ro3_A PINS homolog, G-protein 97.3 0.0012 4.3E-08 55.2 9.6 76 396-480 6-81 (164)
186 2c2l_A CHIP, carboxy terminus 97.3 0.00016 5.6E-09 68.8 4.3 70 400-484 39-108 (281)
187 4abn_A Tetratricopeptide repea 97.3 0.0001 3.5E-09 76.0 3.0 74 399-488 102-176 (474)
188 3ulq_A Response regulator aspa 97.3 0.00047 1.6E-08 68.3 7.7 72 397-477 182-253 (383)
189 1fch_A Peroxisomal targeting s 97.3 0.00024 8E-09 69.4 5.4 74 400-488 218-291 (368)
190 2ifu_A Gamma-SNAP; membrane fu 97.3 0.0012 4.2E-08 63.4 10.4 76 399-484 155-230 (307)
191 2ifu_A Gamma-SNAP; membrane fu 97.3 0.00056 1.9E-08 65.8 8.0 74 399-482 116-189 (307)
192 2vsy_A XCC0866; transferase, g 97.2 0.00017 5.7E-09 76.0 4.5 87 401-487 59-167 (568)
193 3as5_A MAMA; tetratricopeptide 97.2 0.00032 1.1E-08 60.6 5.4 87 401-487 44-149 (186)
194 3u4t_A TPR repeat-containing p 97.2 0.00057 2E-08 63.6 7.5 75 403-489 41-115 (272)
195 1qqe_A Vesicular transport pro 97.2 0.0008 2.7E-08 64.2 8.6 74 399-481 77-151 (292)
196 2e2e_A Formate-dependent nitri 97.2 0.00055 1.9E-08 59.6 6.7 28 401-428 80-110 (177)
197 2r5s_A Uncharacterized protein 97.2 0.0002 6.7E-09 62.8 3.8 67 401-483 8-74 (176)
198 3as5_A MAMA; tetratricopeptide 97.2 0.00035 1.2E-08 60.4 5.3 83 402-484 79-180 (186)
199 3qky_A Outer membrane assembly 97.2 0.00059 2E-08 63.6 7.2 75 399-485 52-134 (261)
200 2q7f_A YRRB protein; TPR, prot 97.2 0.00026 8.9E-09 64.5 4.4 87 401-487 127-232 (243)
201 3qww_A SET and MYND domain-con 97.2 0.0011 3.6E-08 67.4 9.2 74 397-477 338-411 (433)
202 2q7f_A YRRB protein; TPR, prot 97.1 0.00041 1.4E-08 63.2 5.4 89 400-488 58-165 (243)
203 2ho1_A Type 4 fimbrial biogene 97.1 0.00024 8.3E-09 65.4 3.8 71 399-484 37-107 (252)
204 3hym_B Cell division cycle pro 97.1 0.00046 1.6E-08 65.9 5.9 83 401-489 195-277 (330)
205 1w3b_A UDP-N-acetylglucosamine 97.1 0.00036 1.2E-08 69.1 5.2 30 399-428 67-96 (388)
206 3n71_A Histone lysine methyltr 97.1 0.0016 5.6E-08 67.0 10.1 78 393-477 303-380 (490)
207 1xnf_A Lipoprotein NLPI; TPR, 97.1 0.0007 2.4E-08 62.9 6.8 68 400-482 78-145 (275)
208 3cv0_A Peroxisome targeting si 97.1 0.00044 1.5E-08 66.0 5.0 87 400-486 22-127 (327)
209 3edt_B KLC 2, kinesin light ch 97.0 0.00053 1.8E-08 63.7 5.3 73 398-477 42-114 (283)
210 2kat_A Uncharacterized protein 97.0 0.00014 4.9E-09 58.6 1.1 58 417-489 3-60 (115)
211 3edt_B KLC 2, kinesin light ch 97.0 0.00041 1.4E-08 64.5 4.4 74 397-477 83-156 (283)
212 2yhc_A BAMD, UPF0169 lipoprote 97.0 0.0025 8.7E-08 58.0 9.6 69 403-483 151-219 (225)
213 2vq2_A PILW, putative fimbrial 97.0 0.00086 2.9E-08 60.0 6.0 67 404-485 118-185 (225)
214 2ho1_A Type 4 fimbrial biogene 97.0 0.00064 2.2E-08 62.5 5.2 71 402-485 108-178 (252)
215 1w3b_A UDP-N-acetylglucosamine 97.0 0.00036 1.2E-08 69.1 3.6 89 401-489 273-380 (388)
216 3gw4_A Uncharacterized protein 97.0 0.0037 1.3E-07 55.0 10.0 71 398-477 25-95 (203)
217 3n71_A Histone lysine methyltr 96.9 0.0022 7.5E-08 66.1 9.2 74 397-477 349-422 (490)
218 3u3w_A Transcriptional activat 96.9 0.0021 7.2E-08 61.1 8.2 73 397-478 194-267 (293)
219 3cv0_A Peroxisome targeting si 96.9 0.00088 3E-08 63.8 5.4 73 400-487 173-245 (327)
220 4g1t_A Interferon-induced prot 96.9 0.00045 1.5E-08 70.2 3.4 74 401-480 53-126 (472)
221 3qwp_A SET and MYND domain-con 96.9 0.0027 9.3E-08 64.3 9.1 76 395-477 325-400 (429)
222 4a1s_A PINS, partner of inscut 96.9 0.001 3.6E-08 66.0 6.0 33 396-428 45-77 (411)
223 3ulq_A Response regulator aspa 96.9 0.003 1E-07 62.4 9.2 77 397-481 141-217 (383)
224 3qww_A SET and MYND domain-con 96.8 0.0038 1.3E-07 63.3 9.8 77 394-477 293-369 (433)
225 3qou_A Protein YBBN; thioredox 96.8 0.00039 1.3E-08 66.3 2.1 67 399-480 117-183 (287)
226 3bee_A Putative YFRE protein; 96.8 0.0028 9.6E-08 49.3 6.7 67 400-481 7-76 (93)
227 2xpi_A Anaphase-promoting comp 96.8 0.00094 3.2E-08 70.0 5.1 76 399-489 516-591 (597)
228 3gw4_A Uncharacterized protein 96.8 0.0065 2.2E-07 53.4 10.0 72 398-478 106-177 (203)
229 4g1t_A Interferon-induced prot 96.8 0.00097 3.3E-08 67.7 5.0 80 402-488 97-178 (472)
230 2qfc_A PLCR protein; TPR, HTH, 96.7 0.0045 1.5E-07 58.8 9.0 70 400-478 197-267 (293)
231 3q15_A PSP28, response regulat 96.7 0.0067 2.3E-07 59.8 10.4 74 398-479 140-213 (378)
232 3ma5_A Tetratricopeptide repea 96.6 0.00076 2.6E-08 53.0 2.4 43 447-489 6-48 (100)
233 3mkr_A Coatomer subunit epsilo 96.6 0.0024 8.2E-08 61.0 6.1 68 402-484 203-271 (291)
234 3o48_A Mitochondria fission 1 96.6 0.0024 8.2E-08 52.7 5.1 40 446-485 76-115 (134)
235 1nzn_A CGI-135 protein, fissio 96.6 0.0021 7E-08 52.8 4.5 40 446-485 72-111 (126)
236 3qwp_A SET and MYND domain-con 96.6 0.0071 2.4E-07 61.2 9.5 74 397-477 285-358 (429)
237 3ro2_A PINS homolog, G-protein 96.6 0.0086 2.9E-07 56.6 9.7 83 399-481 5-116 (338)
238 4a1s_A PINS, partner of inscut 96.5 0.0028 9.5E-08 62.9 5.8 71 398-477 85-155 (411)
239 3fp2_A TPR repeat-containing p 96.4 0.0024 8.3E-08 65.6 5.3 71 400-485 311-381 (537)
240 3nf1_A KLC 1, kinesin light ch 96.4 0.0031 1.1E-07 59.4 5.7 73 398-477 110-182 (311)
241 3nf1_A KLC 1, kinesin light ch 96.4 0.0084 2.9E-07 56.4 8.4 75 396-477 24-98 (311)
242 3sf4_A G-protein-signaling mod 96.3 0.0095 3.3E-07 58.4 8.9 73 399-480 47-119 (406)
243 3sf4_A G-protein-signaling mod 96.3 0.011 3.9E-07 57.8 9.4 68 399-477 9-76 (406)
244 3ro2_A PINS homolog, G-protein 96.3 0.017 5.7E-07 54.6 10.0 73 399-480 263-335 (338)
245 3ffl_A Anaphase-promoting comp 96.2 0.018 6.2E-07 49.4 8.6 76 398-473 62-147 (167)
246 2gw1_A Mitochondrial precursor 96.1 0.0073 2.5E-07 61.5 6.9 70 400-484 40-109 (514)
247 1y8m_A FIS1; mitochondria, unk 96.1 0.0042 1.4E-07 51.9 4.0 39 447-485 76-114 (144)
248 3qou_A Protein YBBN; thioredox 96.1 0.0038 1.3E-07 59.4 4.0 89 399-487 151-260 (287)
249 1ouv_A Conserved hypothetical 95.9 0.0089 3E-07 55.7 5.9 86 400-487 7-115 (273)
250 2ond_A Cleavage stimulation fa 95.9 0.0099 3.4E-07 56.9 6.1 54 415-482 80-133 (308)
251 2l6j_A TPR repeat-containing p 95.8 0.0033 1.1E-07 49.4 1.8 42 448-489 4-45 (111)
252 2r5s_A Uncharacterized protein 95.8 0.0052 1.8E-07 53.4 3.3 89 398-487 39-149 (176)
253 2xpi_A Anaphase-promoting comp 95.7 0.0099 3.4E-07 62.0 5.9 86 401-486 375-479 (597)
254 1dce_A Protein (RAB geranylger 95.6 0.006 2.1E-07 64.1 3.7 73 401-488 65-149 (567)
255 2ond_A Cleavage stimulation fa 95.5 0.011 3.7E-07 56.5 4.9 69 402-484 102-170 (308)
256 1ouv_A Conserved hypothetical 95.4 0.021 7.1E-07 53.1 6.2 40 447-488 109-152 (273)
257 4b4t_Q 26S proteasome regulato 95.3 0.017 5.8E-07 57.6 5.8 83 402-484 7-91 (434)
258 3rjv_A Putative SEL1 repeat pr 95.3 0.018 6E-07 51.9 5.4 73 402-488 88-168 (212)
259 1dce_A Protein (RAB geranylger 95.3 0.014 4.7E-07 61.4 5.2 82 393-489 22-114 (567)
260 1na3_A Designed protein CTPR2; 95.3 0.011 3.8E-07 44.3 3.3 43 447-489 8-50 (91)
261 1hz4_A MALT regulatory protein 95.2 0.061 2.1E-06 52.4 9.3 72 402-480 96-167 (373)
262 4f3v_A ESX-1 secretion system 95.2 0.036 1.2E-06 52.4 7.1 69 402-484 174-243 (282)
263 3rjv_A Putative SEL1 repeat pr 95.1 0.022 7.4E-07 51.3 5.3 90 399-488 18-131 (212)
264 4f3v_A ESX-1 secretion system 95.0 0.016 5.4E-07 54.9 4.1 78 401-491 137-217 (282)
265 1klx_A Cysteine rich protein B 94.9 0.065 2.2E-06 44.5 7.4 69 400-487 58-134 (138)
266 1hz4_A MALT regulatory protein 94.6 0.12 4.2E-06 50.2 9.7 73 398-479 52-124 (373)
267 3dra_A Protein farnesyltransfe 94.6 0.029 9.8E-07 53.9 4.7 63 411-488 44-109 (306)
268 3ffl_A Anaphase-promoting comp 94.6 0.2 6.9E-06 42.9 9.4 71 401-478 22-93 (167)
269 2v6y_A AAA family ATPase, P60 94.5 0.079 2.7E-06 40.0 6.0 42 390-431 1-43 (83)
270 4b4t_Q 26S proteasome regulato 94.4 0.11 3.6E-06 51.7 8.7 72 399-479 135-206 (434)
271 3dra_A Protein farnesyltransfe 94.0 0.04 1.4E-06 52.9 4.5 75 399-488 67-150 (306)
272 2kc7_A BFR218_protein; tetratr 93.8 0.018 6.1E-07 44.3 1.3 39 451-489 3-42 (99)
273 1xi4_A Clathrin heavy chain; a 93.4 0.071 2.4E-06 60.7 5.5 13 268-280 268-280 (1630)
274 1b89_A Protein (clathrin heavy 93.1 0.034 1.2E-06 56.0 2.2 51 401-474 124-174 (449)
275 1klx_A Cysteine rich protein B 93.0 0.11 3.8E-06 43.1 5.1 65 405-488 31-99 (138)
276 3q7a_A Farnesyltransferase alp 93.0 0.073 2.5E-06 52.0 4.4 40 448-487 123-164 (349)
277 2ff4_A Probable regulatory pro 93.0 0.22 7.5E-06 49.4 8.0 89 399-487 115-210 (388)
278 2cpt_A SKD1 protein, vacuolar 92.7 0.56 1.9E-05 37.8 8.5 44 388-431 6-50 (117)
279 2xm6_A Protein corresponding t 92.5 0.15 5.1E-06 52.0 6.2 40 448-487 399-445 (490)
280 3dss_A Geranylgeranyl transfer 92.3 0.1 3.4E-06 50.6 4.3 43 446-488 142-185 (331)
281 3dss_A Geranylgeranyl transfer 92.2 0.085 2.9E-06 51.1 3.7 64 410-488 40-114 (331)
282 2w2u_A Hypothetical P60 katani 92.2 0.15 5.2E-06 38.4 4.3 43 389-431 8-51 (83)
283 3q7a_A Farnesyltransferase alp 92.1 0.15 5.2E-06 49.7 5.3 62 412-488 67-129 (349)
284 2ooe_A Cleavage stimulation fa 91.4 0.14 4.8E-06 52.8 4.5 68 403-487 17-84 (530)
285 2v6x_A Vacuolar protein sortin 91.3 0.43 1.5E-05 36.1 6.0 42 390-431 4-45 (85)
286 1wfd_A Hypothetical protein 15 91.1 0.79 2.7E-05 35.2 7.4 63 394-456 10-73 (93)
287 4a5x_A MITD1, MIT domain-conta 90.3 0.97 3.3E-05 34.1 7.1 35 397-431 14-48 (86)
288 1b89_A Protein (clathrin heavy 89.9 0.91 3.1E-05 45.6 8.6 83 394-485 143-244 (449)
289 1xi4_A Clathrin heavy chain; a 89.1 0.53 1.8E-05 53.8 6.8 11 318-328 325-335 (1630)
290 4gns_B Protein CSD3, chitin bi 89.0 0.74 2.5E-05 49.5 7.6 59 401-474 339-397 (754)
291 3mv2_A Coatomer subunit alpha; 89.0 3.4 0.00012 39.2 11.3 80 402-481 117-240 (325)
292 2crb_A Nuclear receptor bindin 88.9 2 7E-05 32.4 7.6 42 396-437 12-53 (97)
293 3e4b_A ALGK; tetratricopeptide 88.6 0.25 8.5E-06 50.0 3.5 85 402-488 179-289 (452)
294 2ooe_A Cleavage stimulation fa 88.5 0.81 2.8E-05 46.9 7.4 65 402-481 275-354 (530)
295 3ly7_A Transcriptional activat 88.4 1.6 5.4E-05 42.7 8.9 62 405-482 283-344 (372)
296 2xm6_A Protein corresponding t 86.9 1.1 3.7E-05 45.5 7.1 86 400-487 40-152 (490)
297 2dl1_A Spartin; SPG20, MIT, st 86.8 4.7 0.00016 32.0 9.1 74 394-467 17-97 (116)
298 3mkr_B Coatomer subunit alpha; 86.7 7.7 0.00026 36.8 12.2 79 402-480 105-230 (320)
299 3e4b_A ALGK; tetratricopeptide 85.5 0.58 2E-05 47.2 4.2 18 411-428 263-280 (452)
300 3bee_A Putative YFRE protein; 83.5 0.79 2.7E-05 35.1 3.2 40 448-487 6-48 (93)
301 3mv2_B Coatomer subunit epsilo 81.3 2 6.9E-05 40.9 5.8 64 403-479 104-167 (310)
302 3mv2_B Coatomer subunit epsilo 81.1 1.2 4E-05 42.6 4.0 59 414-488 193-261 (310)
303 2wb7_A PT26-6P; extra chromoso 80.2 2.6 8.9E-05 42.1 6.2 85 392-477 422-516 (526)
304 3mkq_A Coatomer beta'-subunit; 79.5 3 0.0001 44.8 7.3 74 401-475 683-763 (814)
305 3u64_A Protein TP_0956; tetrat 78.6 1.2 4E-05 42.0 3.1 67 400-480 200-272 (301)
306 1pc2_A Mitochondria fission pr 78.2 0.29 1E-05 41.4 -1.0 62 414-490 13-79 (152)
307 2vkj_A TM1634; membrane protei 78.1 11 0.00038 28.1 7.5 32 397-428 51-82 (106)
308 2v5f_A Prolyl 4-hydroxylase su 76.7 2.3 7.8E-05 32.9 3.9 29 400-428 47-75 (104)
309 3txn_A 26S proteasome regulato 76.1 8.3 0.00029 38.0 8.6 65 404-477 104-168 (394)
310 3u64_A Protein TP_0956; tetrat 72.5 3.2 0.00011 39.0 4.3 41 447-487 198-244 (301)
311 4b4t_R RPN7, 26S proteasome re 69.4 3.9 0.00013 40.9 4.5 65 401-477 133-197 (429)
312 3eab_A Spastin; spastin, MIT, 66.2 31 0.0011 25.9 7.7 67 396-462 13-86 (89)
313 2ymb_A MITD1, MIT domain-conta 65.7 1.3 4.3E-05 40.8 0.0 64 394-457 18-82 (257)
314 3mkq_B Coatomer subunit alpha; 64.4 17 0.00057 31.3 6.9 29 399-427 34-62 (177)
315 2br9_A 14-3-3E, 14-3-3 protein 59.0 19 0.00065 32.5 6.5 54 416-476 147-201 (234)
316 2npm_A 14-3-3 domain containin 57.5 25 0.00085 32.3 7.1 53 416-476 173-226 (260)
317 3ly7_A Transcriptional activat 55.7 83 0.0028 30.5 10.9 30 451-480 280-309 (372)
318 3uzd_A 14-3-3 protein gamma; s 55.5 24 0.00081 32.2 6.5 54 416-476 148-202 (248)
319 1o9d_A 14-3-3-like protein C; 55.4 23 0.00079 32.5 6.5 54 416-476 152-206 (260)
320 3ubw_A 14-3-3E, 14-3-3 protein 55.0 24 0.00082 32.3 6.5 54 416-476 173-227 (261)
321 3iqu_A 14-3-3 protein sigma; s 51.5 27 0.00092 31.5 6.2 55 415-476 149-204 (236)
322 3efz_A 14-3-3 protein; 14-3-3, 47.6 25 0.00085 32.3 5.3 57 416-477 169-226 (268)
323 2ff4_A Probable regulatory pro 47.6 33 0.0011 33.5 6.8 60 400-474 172-231 (388)
324 1zbp_A Hypothetical protein VP 47.4 19 0.00066 33.2 4.6 64 406-484 4-67 (273)
325 2o8p_A 14-3-3 domain containin 47.1 17 0.00058 32.6 4.1 59 412-477 138-197 (227)
326 3ax2_A Mitochondrial import re 43.9 36 0.0012 24.5 4.6 38 394-431 12-49 (73)
327 3kae_A CDC27, possible protein 42.5 45 0.0015 28.6 5.7 26 450-475 64-89 (242)
328 2zan_A Vacuolar protein sortin 42.1 5.4 0.00018 40.0 0.0 39 394-432 6-44 (444)
329 2yin_A DOCK2, dedicator of cyt 38.6 91 0.0031 30.9 8.4 74 404-477 40-121 (436)
330 1om2_A Protein (mitochondrial 38.0 91 0.0031 23.7 6.3 41 391-431 12-52 (95)
331 2crb_A Nuclear receptor bindin 34.8 59 0.002 24.5 4.6 29 447-475 14-42 (97)
332 2ijq_A Hypothetical protein; s 33.8 1.4E+02 0.0046 25.1 7.4 69 402-477 35-104 (161)
333 2cwy_A Hypothetical protein TT 32.0 1.5E+02 0.0052 22.2 6.8 60 404-476 6-67 (94)
334 4b4t_P 26S proteasome regulato 30.9 2.4E+02 0.0081 27.8 10.1 68 399-475 137-204 (445)
335 4b4t_P 26S proteasome regulato 30.0 2.7E+02 0.0094 27.4 10.4 71 399-477 177-247 (445)
336 2uy1_A Cleavage stimulation fa 29.4 42 0.0014 33.8 4.3 34 396-429 11-44 (493)
337 2xze_A STAM-binding protein; h 28.4 1.1E+02 0.0036 25.3 5.9 41 389-429 30-70 (146)
338 4e6h_A MRNA 3'-END-processing 28.2 85 0.0029 33.2 6.5 63 410-487 77-144 (679)
339 3lpz_A GET4 (YOR164C homolog); 26.8 4.1E+02 0.014 25.1 10.4 79 393-471 29-159 (336)
340 2oo2_A Hypothetical protein AF 26.7 1.4E+02 0.0047 22.2 5.5 38 392-429 28-65 (86)
341 2pmr_A Uncharacterized protein 25.4 1.5E+02 0.0051 22.1 5.5 38 392-429 32-69 (87)
342 3myv_A SUSD superfamily protei 25.2 88 0.003 31.1 5.7 30 448-477 190-219 (454)
343 2wpv_A GET4, UPF0363 protein Y 24.7 3.7E+02 0.013 25.1 9.6 66 401-475 15-80 (312)
344 3kez_A Putative sugar binding 23.9 97 0.0033 30.8 5.8 30 448-477 196-225 (461)
345 3htx_A HEN1; HEN1, small RNA m 23.8 1.2E+02 0.0041 33.0 6.5 58 52-113 560-649 (950)
346 2jpu_A ORF C02003 protein; sol 22.1 71 0.0024 25.8 3.4 32 397-428 5-36 (129)
347 4a5x_A MITD1, MIT domain-conta 21.3 1.5E+02 0.0052 21.8 5.0 27 451-477 19-45 (86)
348 3txn_A 26S proteasome regulato 21.1 4.5E+02 0.015 25.4 9.8 65 404-476 144-209 (394)
349 3mcx_A SUSD superfamily protei 21.0 98 0.0034 30.9 5.1 30 448-477 202-231 (477)
350 2uy1_A Cleavage stimulation fa 20.9 1.9E+02 0.0065 28.9 7.3 35 448-483 213-247 (493)
351 3re2_A Predicted protein; meni 20.8 1.8E+02 0.006 28.0 6.3 31 404-434 301-331 (472)
352 3mkq_A Coatomer beta'-subunit; 20.7 78 0.0027 33.4 4.6 27 448-474 681-707 (814)
353 4e6h_A MRNA 3'-END-processing 20.3 1.4E+02 0.0049 31.4 6.4 52 411-477 355-407 (679)
354 2rpa_A Katanin P60 ATPase-cont 20.2 91 0.0031 22.7 3.4 39 389-431 6-44 (78)
355 1ya0_A SMG-7 transcript varian 20.2 1.1E+02 0.0039 30.8 5.4 63 404-481 157-219 (497)
No 1
>3jxv_A 70 kDa peptidyl-prolyl isomerase; FKBP- binding domain five-stranded anti-parallel beta-sheet alpha-helix crossing THis sheet; 2.08A {Triticum aestivum} PDB: 3jym_A
Probab=100.00 E-value=6.5e-68 Score=530.42 Aligned_cols=354 Identities=81% Similarity=1.271 Sum_probs=223.4
Q ss_pred ccceeeecCCCeEEEEEEcccCcCCCCCCCEEEEEEEEEecCCCEEeecCCCCCcEEEEcCCCcccHhHHHHhccCcCcc
Q 011164 28 VGEEKEIGNQGLKKKLVKEGEGWDTPENGDEVEVHYTGTLLDGTQFDSSRDRSTPFKFTLGQGNVIKGWDIGIKTMKKGE 107 (492)
Q Consensus 28 ~~~~~~~~~~g~~~~il~~G~G~~~~~~gd~V~v~Y~~~~~dg~~~~ss~~~~~p~~f~lg~~~~~~gle~~l~~m~~Ge 107 (492)
++++..++++|++|+++++|+|+..|..||.|.+||++++.||++|++|+.++.|+.|.+|.+++++||+++|.+|++|+
T Consensus 2 ~~~~~~~~~~Gl~~~i~~~G~G~~~~~~gd~V~v~Y~g~~~dG~~fdss~~~~~p~~~~lG~g~~i~g~e~~l~gm~~Ge 81 (356)
T 3jxv_A 2 VGEENEIGKQGLKKKLLKEGEGWDTPEVGDEVEVHYTGTLLDGKKFDSSRDRDDTFKFKLGQGQVIKGWDQGIKTMKKGE 81 (356)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred CCccceECCCCeEEEEEEeecCCccCCCCCEEEEEEEEEECCCCEEEEcccCCCcEEEEeCCCccchHHHHHHhcCCCCC
Confidence 56777889999999999999997789999999999999999999999999888999999999999999999999999999
Q ss_pred EEEEEecCCcccCCCCCCCCCCCCCceEEEEEEEEEeecccccccccceeeeeecCcccCCCCCcceEEEEEEEEcCCCc
Q 011164 108 NAVFTIPPELAYGESGSPPTIPPNATLQFDVELLSWTSVKDICKDGGIIKKILKEGEKWENPKDLDEVLVNYEARLEDGM 187 (492)
Q Consensus 108 ~~~~~i~~~~ayg~~~~~~~i~~~~~l~~~vel~~~~~~~~~~~d~~~~k~i~~~g~g~~~~~~~d~V~v~y~~~l~~g~ 187 (492)
+++|+|||++|||+.+.++.||++++|+|+|+|+++..+.++..|..+.++++..|.|+.+|..++.|+|||+++++||+
T Consensus 82 ~~~~~ip~~~aYG~~g~~~~Ip~~~~l~f~vel~~~~~~~di~~D~~~~k~i~~~G~g~~~p~~g~~V~v~y~g~l~dgt 161 (356)
T 3jxv_A 82 NALFTIPPELAYGESGSPPTIPANATLQFDVELLSWTSVRDIAKDGGIFKKILKEGDKWENPKDPDEVFVKYEARLEDGT 161 (356)
T ss_dssp ------------------------------------CCEEETTSSSSEEEEEEECCBSSCCCCTTCEEEEEEEEEETTSC
T ss_pred EEEEEEChHHhCCCCCCCCCcCCCCEEEEEeeEEeeecccccccCceeEEEEEecCcccCCCCCCCEEEEEEEEEECCCC
Confidence 99999999999999999889999999999999999999999999999999999999999999999999999999999999
Q ss_pred EEeeecCeeeEeCCCCccchHHHHHhccccCcEEEEEecCCCccCCCCCCCCCCCCCCCCCCeEEEEEEeecccceeeee
Q 011164 188 VVGKADGVEFTVKDGHFCPTLAKAVKTMKKGEKVLLAVKPQYGFGEKGKSASGNEGAVPPNATLQIALELVSWKTVSEIT 267 (492)
Q Consensus 188 ~~~~~~~~~~~~g~~~~~~~l~~~l~~m~~ge~~~i~vp~~~~~g~~~~~~~~~~~~ip~~~~l~~~v~l~~~~~~~d~~ 267 (492)
+++++.++.|.+|++++++||+.+|.+|++||+++++|||+|+||+.|++..+....|||+++|.|+|+|++|..+.++.
T Consensus 162 ~~~~~~~~~f~~g~~~v~~gl~~~l~~m~~GE~~~~~v~p~~~yg~~G~~~~~~~~~ip~~~~l~~~vel~~~~~v~dv~ 241 (356)
T 3jxv_A 162 VVSKSEGVEFTVKDGHLCPALAKAVKTMKKGEKVLLAVKPQYGFGEMGRPAAGEGGAVPPNASLVIDLELVSWKTVTEIG 241 (356)
T ss_dssp EEEEEEEEEEEGGGCSSSHHHHHHHTTCCBTCEEEEEECGGGTTTTTCBCCCC--CCBCTTCCEEEEEEEEEEECEEEES
T ss_pred EEeccCCEEEEeCCCCcchHHHHHHhhCCCCCEEEEEEChHhhcCCCCCCcccccccCCCCcEEEEEEEEEEEecccccc
Confidence 99999999999999999999999999999999999999999999999998777677899999999999999999999999
Q ss_pred CCccEEEEEEecCCCCCCCCCCCEEEEEEEEEEcCCcEEEEcCCCCCcccEEEEcCCcccchhHHHHHhccCcCcEEEEE
Q 011164 268 DDKKVIKKILKEGDGFERPNEGAVVKVKLIGKLQDGTVFVKKGHSEEEQLFEFKTDEEQVIDGLDRAVITMKKNEVALLT 347 (492)
Q Consensus 268 ~d~~v~k~il~~G~g~~~p~~g~~V~v~y~~~~~~g~~~d~~~~~~~~~~~~~~lg~~~~~~gle~~l~~m~~Ge~~~i~ 347 (492)
.|++++++++++|.|..+|..||.|+|||++++.||++|+++.. ...+|+.|.+|.+++++||+.+|.+|++||+++|.
T Consensus 242 ~d~~~~~~i~~~g~g~~~~~~gd~V~v~y~g~l~dG~~fd~~~~-~~~~p~~f~~G~g~~i~G~e~~l~gm~~Ge~~~v~ 320 (356)
T 3jxv_A 242 DDKKILKKVLKEXEGYERPNEGAVVTVKITGKLQDGTVFLKKGH-DEQEPFEFKTDEEAVIEGLDRAVLNMKKGEVALVT 320 (356)
T ss_dssp TTCCEEEEEEECCBSSCCCCTTCEEEEEEEEEESSSCEEEEESC-TTSCCCEEETTTTSSCHHHHHHHTTCCBTCEEEEE
T ss_pred cccceeEEeeecccccCCCCCCCEEEEEEEEEECCCCEEeeccc-cCCcCEEEEECCCccchHHHHHHhCCCCCCEEEEE
Confidence 99999999999999988999999999999999999999998742 35789999999999999999999999999999999
Q ss_pred ECCCCccCCCccccccccCCCCccEEEEEEEeeeee
Q 011164 348 IAPEYAFGSAESQQELAVVPPNSTVHYEVELVSFEK 383 (492)
Q Consensus 348 ip~~~~yg~~~~~~~~~~ip~~~~l~~~v~l~~~~~ 383 (492)
|||++|||..+... ...|||+++|+|+|+|++|.+
T Consensus 321 ip~~~aYG~~~~~~-~~~Ip~~~~l~f~vel~~~~~ 355 (356)
T 3jxv_A 321 IPPEYAYGSTESKQ-DAIVPPNSTVIYEVELVSFVK 355 (356)
T ss_dssp ECGGGTTTTSCEES-SSEECTTCCEEEEEEEEEEEC
T ss_pred EChHHccCCCCcCC-CCcCCcCCeEEEEEEEEEEEc
Confidence 99999999887532 256999999999999999975
No 2
>1kt0_A FKBP51, 51 kDa FK506-binding protein; FKBP-like ppiase, TPR repeats, isomerase; 2.70A {Homo sapiens} SCOP: a.118.8.1 d.26.1.1 d.26.1.1 PDB: 1kt1_A 3o5d_A
Probab=100.00 E-value=3.5e-50 Score=417.82 Aligned_cols=329 Identities=40% Similarity=0.702 Sum_probs=281.0
Q ss_pred cCCCeEEEEEEcccCcCCCCCCCEEEEEEEEEecCCCEEeecCCCCCcEEEEcCCCcccHhHHHHhccCcCccEEEEEec
Q 011164 35 GNQGLKKKLVKEGEGWDTPENGDEVEVHYTGTLLDGTQFDSSRDRSTPFKFTLGQGNVIKGWDIGIKTMKKGENAVFTIP 114 (492)
Q Consensus 35 ~~~g~~~~il~~G~G~~~~~~gd~V~v~Y~~~~~dg~~~~ss~~~~~p~~f~lg~~~~~~gle~~l~~m~~Ge~~~~~i~ 114 (492)
+++|++|+++++|+|...|..||.|.|||++++.||++|++|+.++.|+.|.+|.+++++||+++|.+|++||+++|+||
T Consensus 29 ~~~g~~~~~~~~G~g~~~~~~gd~v~v~y~~~~~~g~~~dss~~~~~p~~~~~g~~~~i~g~~~~l~~m~~Ge~~~~~i~ 108 (457)
T 1kt0_A 29 KDRGVLKIVKRVGNGEETPMIGDKVYVHYKGKLSNGKKFDSSHDRNEPFVFSLGKGQVIKAWDIGVATMKRGEICHLLCK 108 (457)
T ss_dssp ----CEEEC--------CCCBTCEEEEEEEEEC-----CBC------CEEEETTSTTSCHHHHHHHTTCCTTCEEEEEEC
T ss_pred CCCcEEEEEEECCCCCCCCCCCCEEEEEEEEEECCCCEEeccCCCCCCeEEEeCCcchhhHHHHHHhhCCCCCEEEEEEC
Confidence 78899999999999955599999999999999999999999998788999999999999999999999999999999999
Q ss_pred CCcccCCCCCCCCCCCCCceEEEEEEEEEeecccccccccceeeeeecCcccCCCCCcceEEEEEEEEcCCCcEEeeecC
Q 011164 115 PELAYGESGSPPTIPPNATLQFDVELLSWTSVKDICKDGGIIKKILKEGEKWENPKDLDEVLVNYEARLEDGMVVGKADG 194 (492)
Q Consensus 115 ~~~ayg~~~~~~~i~~~~~l~~~vel~~~~~~~~~~~d~~~~k~i~~~g~g~~~~~~~d~V~v~y~~~l~~g~~~~~~~~ 194 (492)
|+++||..+.++.||++++++|+|+|+++...
T Consensus 109 ~~~~yg~~g~~~~i~~~~~l~~~v~l~~~~~~------------------------------------------------ 140 (457)
T 1kt0_A 109 PEYAYGSAGSLPKIPSNATLFFEIELLDFKGE------------------------------------------------ 140 (457)
T ss_dssp GGGTTTTTCBTTTBCTTCCEEEEEEEEEEECE------------------------------------------------
T ss_pred hHHhccccCCCCCCCCCCcEEEEEeeceeecc------------------------------------------------
Confidence 99999999988889999999999998887420
Q ss_pred eeeEeCCCCccchHHHHHhccccCcEEEEEecCCCccCCCCCCCCCCCCCCCCCCeEEEEEEeecccceeeeeCCccEEE
Q 011164 195 VEFTVKDGHFCPTLAKAVKTMKKGEKVLLAVKPQYGFGEKGKSASGNEGAVPPNATLQIALELVSWKTVSEITDDKKVIK 274 (492)
Q Consensus 195 ~~~~~g~~~~~~~l~~~l~~m~~ge~~~i~vp~~~~~g~~~~~~~~~~~~ip~~~~l~~~v~l~~~~~~~d~~~d~~v~k 274 (492)
++..|+++.+
T Consensus 141 ----------------------------------------------------------------------~~~~dg~~~k 150 (457)
T 1kt0_A 141 ----------------------------------------------------------------------DLFEDGGIIR 150 (457)
T ss_dssp ----------------------------------------------------------------------ETTSSSSEEE
T ss_pred ----------------------------------------------------------------------cccCCcceEE
Confidence 1113567888
Q ss_pred EEEecCCCCCCCCCCCEEEEEEEEEEcCCcEEEEcCCCCCcccEEEEcCCc---ccchhHHHHHhccCcCcEEEEEECCC
Q 011164 275 KILKEGDGFERPNEGAVVKVKLIGKLQDGTVFVKKGHSEEEQLFEFKTDEE---QVIDGLDRAVITMKKNEVALLTIAPE 351 (492)
Q Consensus 275 ~il~~G~g~~~p~~g~~V~v~y~~~~~~g~~~d~~~~~~~~~~~~~~lg~~---~~~~gle~~l~~m~~Ge~~~i~ip~~ 351 (492)
+++++|.|..+|..|+.|++||++++ +|++|+++ ++.|.+|+| .++++|+.||..|+.||++.|.++|.
T Consensus 151 ~i~~~g~~~~~p~~g~~V~v~y~g~~-~g~~f~~~-------~~~f~~g~g~~~~v~~~~e~al~~~~~ge~~~l~i~P~ 222 (457)
T 1kt0_A 151 RTKRKGEGYSNPNEGATVEIHLEGRC-GGRMFDCR-------DVAFTVGEGEDHDIPIGIDKALEKMQREEQCILYLGPR 222 (457)
T ss_dssp EEEECCBCSCCCCTTCEEEEEEEEEE-TTEEEEEE-------EEEEETTCGGGGTCCHHHHHHHTTCCBTCEEEEEECGG
T ss_pred EEEecCCCCCCCCCCCEEEEEEEEEe-CCeEEecC-------ceEEEeCCCccccCChHHHHHHHhCCCCCEEEEEECcc
Confidence 99999999889999999999999999 89999763 489999977 48999999999999999999999999
Q ss_pred CccCCCccccccccCCCCccEEEEEEEeeeeecccCCCCChHHHHHHHHHHHHhhhHHHHcccHHHHHHHHHHHHHHhcc
Q 011164 352 YAFGSAESQQELAVVPPNSTVHYEVELVSFEKEKESWDMNTEEKIEAAGKKKEQGNTLFKAGKYARASKRYEKAVKYIEY 431 (492)
Q Consensus 352 ~~yg~~~~~~~~~~ip~~~~l~~~v~l~~~~~~~~~~~~~~~e~l~~a~~~K~~Gn~~fk~~~~~~A~~~Y~~al~~l~~ 431 (492)
++|+..|... ..|||++.+.|.+.+.++.+....|.+..++....+..++.+|+.+|++++|.+|+..|++|+++...
T Consensus 223 ~ay~~~g~~~--~~ip~~~~l~y~~~l~~~~~A~~~~~~~~~~~~~~a~~~~~~G~~~~~~g~~~~A~~~y~~Al~~~p~ 300 (457)
T 1kt0_A 223 YGFGEAGKPK--FGIEPNAELIYEVTLKSFEKAKESWEMDTKEKLEQAAIVKEKGTVYFKGGKYMQAVIQYGKIVSWLEM 300 (457)
T ss_dssp GTTCSSCBGG--GTBCTTCCEEEEEEEEEEECCCCGGGSCHHHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHTT
T ss_pred cccCCCCCcc--cCCCCCCEEEEEhhhhhcccCcchhhcCHHHHHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHhcc
Confidence 9999988753 46999999999999999999999999999999999999999999999999999999999999999877
Q ss_pred cCCCChHHHHHHHHHHHHhHhHHHHHHHHhcCHHHHHHHHHHHHhcCCCCccceeeeecc
Q 011164 432 DTSFGDEEKKQAKALKVACNLNNAACKLKLKDYKQAEKLCTKVQQQKKFLLLPIFNIYAR 491 (492)
Q Consensus 432 ~~~~~~~~~~~~~~~~~~l~~N~a~~~lk~~~~~~ai~~~~~al~~dp~n~KA~~r~~~~ 491 (492)
.....++...+...+...+|+|+|.||+++++|++|+.+|++||+++|+|.+||||+..+
T Consensus 301 ~~~~~~~~~~~~~~~~~~~~~nla~~~~~~g~~~~A~~~~~~al~~~p~~~~a~~~~g~a 360 (457)
T 1kt0_A 301 EYGLSEKESKASESFLLAAFLNLAMCYLKLREYTKAVECCDKALGLDSANEKGLYRRGEA 360 (457)
T ss_dssp CCSCCHHHHHHHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHSTTCHHHHHHHHHH
T ss_pred cccCChHHHHHHHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHhcCCccHHHHHHHHHH
Confidence 666677777888999999999999999999999999999999999999999999987643
No 3
>1q1c_A FK506-binding protein 4; rotamase, TPR repeat, nuclear protein, phosphorylation, isomerase; 1.90A {Homo sapiens} SCOP: d.26.1.1 d.26.1.1 PDB: 1n1a_A 1rot_A 1rou_A
Probab=100.00 E-value=1.5e-40 Score=319.57 Aligned_cols=234 Identities=46% Similarity=0.808 Sum_probs=206.0
Q ss_pred ceeee--cCCCeEEEEEEcccCcCCCCCCCEEEEEEEEEecCCCEEeecCCCCCcEEEEcCCCcccHhHHHHhccCcCcc
Q 011164 30 EEKEI--GNQGLKKKLVKEGEGWDTPENGDEVEVHYTGTLLDGTQFDSSRDRSTPFKFTLGQGNVIKGWDIGIKTMKKGE 107 (492)
Q Consensus 30 ~~~~~--~~~g~~~~il~~G~G~~~~~~gd~V~v~Y~~~~~dg~~~~ss~~~~~p~~f~lg~~~~~~gle~~l~~m~~Ge 107 (492)
....+ +++|++|+++++|+|...|..||.|.|||++++.||++|++|++++.|+.|.+|.+++++||+++|.+|++|+
T Consensus 42 ~~di~~~~~~gl~~~vl~~G~G~~~~~~gd~V~v~Y~g~~~dG~~fdss~~~~~p~~f~lG~g~vi~G~e~aL~gm~~Ge 121 (280)
T 1q1c_A 42 GVDISPKQDEGVLKVIKREGTGTEMPMIGDRVFVHYTGWLLDGTKFDSSLDRKDKFSFDLGKGEVIKAWDIAIATMKVGE 121 (280)
T ss_dssp CEECCSSCSSSEEEEEEECCSSSCCCCTTCEEEEEEEEEETTSCEEEESTTSSSCEEEETTTTSSCHHHHHHHTTCCTTC
T ss_pred ccccccCCCCceEEEEEeCCCCCcCCCCCCEEEEEEEEEECCCCEEEecccCCCCEEEEECCcChhHHHHHHHhcCCCCC
Confidence 33444 6889999999999995559999999999999999999999999877899999999999999999999999999
Q ss_pred EEEEEecCCcccCCCCCCCCCCCCCceEEEEEEEEEeecccccccccceeeeeecCcccCCCCCcceEEEEEEEEcCCCc
Q 011164 108 NAVFTIPPELAYGESGSPPTIPPNATLQFDVELLSWTSVKDICKDGGIIKKILKEGEKWENPKDLDEVLVNYEARLEDGM 187 (492)
Q Consensus 108 ~~~~~i~~~~ayg~~~~~~~i~~~~~l~~~vel~~~~~~~~~~~d~~~~k~i~~~g~g~~~~~~~d~V~v~y~~~l~~g~ 187 (492)
+++|.|||++|||..+.++.||++++++|+|+|+++... ++
T Consensus 122 ~~~v~ipp~~aYG~~g~~~~Ip~~~~lvf~Vel~~i~~~-~~-------------------------------------- 162 (280)
T 1q1c_A 122 VCHITCKPEYAYGSAGSPPKIPPNATLVFEVELFEFKGE-DL-------------------------------------- 162 (280)
T ss_dssp EEEEEECGGGTTTTTCBTTTBCTTCCEEEEEEEEEEECE-EC--------------------------------------
T ss_pred EEEEEECcHHhCCCcCccCCCCCCCcEEEEEEeeeeccc-cc--------------------------------------
Confidence 999999999999999988889999999999999887421 00
Q ss_pred EEeeecCeeeEeCCCCccchHHHHHhccccCcEEEEEecCCCccCCCCCCCCCCCCCCCCCCeEEEEEEeecccceeeee
Q 011164 188 VVGKADGVEFTVKDGHFCPTLAKAVKTMKKGEKVLLAVKPQYGFGEKGKSASGNEGAVPPNATLQIALELVSWKTVSEIT 267 (492)
Q Consensus 188 ~~~~~~~~~~~~g~~~~~~~l~~~l~~m~~ge~~~i~vp~~~~~g~~~~~~~~~~~~ip~~~~l~~~v~l~~~~~~~d~~ 267 (492)
.+ .
T Consensus 163 --------------------------------------~~---------------------------------------~ 165 (280)
T 1q1c_A 163 --------------------------------------TE---------------------------------------E 165 (280)
T ss_dssp --------------------------------------CT---------------------------------------T
T ss_pred --------------------------------------cc---------------------------------------c
Confidence 00 0
Q ss_pred CCccEEEEEEecCCCCCCCCCCCEEEEEEEEEEcCCcEEEEcCCCCCcccEEEEcCCcc---cchhHHHHHhccCcCcEE
Q 011164 268 DDKKVIKKILKEGDGFERPNEGAVVKVKLIGKLQDGTVFVKKGHSEEEQLFEFKTDEEQ---VIDGLDRAVITMKKNEVA 344 (492)
Q Consensus 268 ~d~~v~k~il~~G~g~~~p~~g~~V~v~y~~~~~~g~~~d~~~~~~~~~~~~~~lg~~~---~~~gle~~l~~m~~Ge~~ 344 (492)
.|+++.++++++|.|...|..||.|+|||++++ +|++|++ .++.|.+|.++ +++||+.+|.+|++||++
T Consensus 166 ~d~gl~~~il~~G~G~~~~~~gd~V~i~y~g~~-dG~~fd~-------~~~~f~lG~g~~~~~i~G~e~~l~gmk~Ge~~ 237 (280)
T 1q1c_A 166 EDGGIIRRIQTRGEGYAKPNEGAIVEVALEGYY-KDKLFDQ-------RELRFEIGEGENLDLPYGLERAIQRMEKGEHS 237 (280)
T ss_dssp CSSSEEEEEEECCSCSCCCCTTCEEEEEEEEEE-TTEEEEE-------EEEEEETTCGGGGTCCHHHHHHHTTCCTTCEE
T ss_pred cccceeEEeeecccccccccCCceEEEEEEEEe-CCEEEec-------CCeEEEecCCcccccchhHHHHHhCCCCCcEE
Confidence 356799999999999768999999999999998 8999975 37999999988 599999999999999999
Q ss_pred EEEECCCCccCCCccccccccCCCCccEEEEEEEeeeeecccCCC
Q 011164 345 LLTIAPEYAFGSAESQQELAVVPPNSTVHYEVELVSFEKEKESWD 389 (492)
Q Consensus 345 ~i~ip~~~~yg~~~~~~~~~~ip~~~~l~~~v~l~~~~~~~~~~~ 389 (492)
+|.|||+++||..+.+. ..|||+++++|+|+|++|.+.++.|+
T Consensus 238 ~v~ip~~~~yG~~~~~~--~~IP~~~~l~f~V~L~~i~~~~~~W~ 280 (280)
T 1q1c_A 238 IVYLKPSYAFGSVGKEK--FQIPPNAELKYELHLKSFEKAKESWE 280 (280)
T ss_dssp EEEECGGGTTTTTCBGG--GTBCTTCCEEEEEEEEEEECCCC---
T ss_pred EEEEChhHcCCcCCCcc--CccCCCCeEEEEEEEEEEeCCCCCCC
Confidence 99999999999887542 25999999999999999999888884
No 4
>3jxv_A 70 kDa peptidyl-prolyl isomerase; FKBP- binding domain five-stranded anti-parallel beta-sheet alpha-helix crossing THis sheet; 2.08A {Triticum aestivum} PDB: 3jym_A
Probab=100.00 E-value=3.5e-35 Score=293.52 Aligned_cols=220 Identities=39% Similarity=0.688 Sum_probs=205.4
Q ss_pred cCCCeEEEEEEcccCcCCCCCCCEEEEEEEEEecCCCEEeecCCCCCcEEEEcCCCcccHhHHHHhccCcCccEEEEEec
Q 011164 35 GNQGLKKKLVKEGEGWDTPENGDEVEVHYTGTLLDGTQFDSSRDRSTPFKFTLGQGNVIKGWDIGIKTMKKGENAVFTIP 114 (492)
Q Consensus 35 ~~~g~~~~il~~G~G~~~~~~gd~V~v~Y~~~~~dg~~~~ss~~~~~p~~f~lg~~~~~~gle~~l~~m~~Ge~~~~~i~ 114 (492)
.+.++.++++++|.|+..|..||.|.+||++++.||++|+++ .++.|.+|.+++++||+.+|.+|++||+++|+||
T Consensus 125 ~D~~~~k~i~~~G~g~~~p~~g~~V~v~y~g~l~dgt~~~~~----~~~~f~~g~~~v~~gl~~~l~~m~~GE~~~~~v~ 200 (356)
T 3jxv_A 125 KDGGIFKKILKEGDKWENPKDPDEVFVKYEARLEDGTVVSKS----EGVEFTVKDGHLCPALAKAVKTMKKGEKVLLAVK 200 (356)
T ss_dssp SSSSEEEEEEECCBSSCCCCTTCEEEEEEEEEETTSCEEEEE----EEEEEEGGGCSSSHHHHHHHTTCCBTCEEEEEEC
T ss_pred cCceeEEEEEecCcccCCCCCCCEEEEEEEEEECCCCEEecc----CCEEEEeCCCCcchHHHHHHhhCCCCCEEEEEEC
Confidence 568999999999999899999999999999999999999998 3799999999999999999999999999999999
Q ss_pred CCcccCCCCCCC-----CCCCCCceEEEEEEEEEeecccccccccceeeeeecCcccCCCCCcceEEEEEEEEcCCCcEE
Q 011164 115 PELAYGESGSPP-----TIPPNATLQFDVELLSWTSVKDICKDGGIIKKILKEGEKWENPKDLDEVLVNYEARLEDGMVV 189 (492)
Q Consensus 115 ~~~ayg~~~~~~-----~i~~~~~l~~~vel~~~~~~~~~~~d~~~~k~i~~~g~g~~~~~~~d~V~v~y~~~l~~g~~~ 189 (492)
|+++||+.+.+. .||+++.|.|+|+|++|....++..|.++.++++..|+|+..+..++.|+|||++++.+|++|
T Consensus 201 p~~~yg~~G~~~~~~~~~ip~~~~l~~~vel~~~~~v~dv~~d~~~~~~i~~~g~g~~~~~~gd~V~v~y~g~l~dG~~f 280 (356)
T 3jxv_A 201 PQYGFGEMGRPAAGEGGAVPPNASLVIDLELVSWKTVTEIGDDKKILKKVLKEXEGYERPNEGAVVTVKITGKLQDGTVF 280 (356)
T ss_dssp GGGTTTTTCBCCCC--CCBCTTCCEEEEEEEEEEECEEEESTTCCEEEEEEECCBSSCCCCTTCEEEEEEEEEESSSCEE
T ss_pred hHhhcCCCCCCcccccccCCCCcEEEEEEEEEEEecccccccccceeEEeeecccccCCCCCCCEEEEEEEEEECCCCEE
Confidence 999999998764 699999999999999999988888899999999999999999999999999999999999999
Q ss_pred eee-----cCeeeEeCCCCccchHHHHHhccccCcEEEEEecCCCccCCCCCCCCCCCCCCCCCCeEEEEEEeeccc
Q 011164 190 GKA-----DGVEFTVKDGHFCPTLAKAVKTMKKGEKVLLAVKPQYGFGEKGKSASGNEGAVPPNATLQIALELVSWK 261 (492)
Q Consensus 190 ~~~-----~~~~~~~g~~~~~~~l~~~l~~m~~ge~~~i~vp~~~~~g~~~~~~~~~~~~ip~~~~l~~~v~l~~~~ 261 (492)
+++ +|+.|.+|.+++++||+++|.+|+.||++++.|||+++||+.+... ...||++++|.|+|+|+++.
T Consensus 281 d~~~~~~~~p~~f~~G~g~~i~G~e~~l~gm~~Ge~~~v~ip~~~aYG~~~~~~---~~~Ip~~~~l~f~vel~~~~ 354 (356)
T 3jxv_A 281 LKKGHDEQEPFEFKTDEEAVIEGLDRAVLNMKKGEVALVTIPPEYAYGSTESKQ---DAIVPPNSTVIYEVELVSFV 354 (356)
T ss_dssp EEESCTTSCCCEEETTTTSSCHHHHHHHTTCCBTCEEEEEECGGGTTTTSCEES---SSEECTTCCEEEEEEEEEEE
T ss_pred eeccccCCcCEEEEECCCccchHHHHHHhCCCCCCEEEEEEChHHccCCCCcCC---CCcCCcCCeEEEEEEEEEEE
Confidence 865 6799999999999999999999999999999999999999876421 14689999999999999875
No 5
>2if4_A ATFKBP42; FKBP-like, alpha-beta, TPR-like, alpha, signaling protein; 2.85A {Arabidopsis thaliana}
Probab=100.00 E-value=6.7e-33 Score=276.41 Aligned_cols=219 Identities=33% Similarity=0.480 Sum_probs=191.9
Q ss_pred CccEEEEEEecCCCCCCCCCCCEEEEEEEEEEcC-CcEEEEcCCCCCcccEEEEcCCc-ccchhHHHHHhccCcCcEEEE
Q 011164 269 DKKVIKKILKEGDGFERPNEGAVVKVKLIGKLQD-GTVFVKKGHSEEEQLFEFKTDEE-QVIDGLDRAVITMKKNEVALL 346 (492)
Q Consensus 269 d~~v~k~il~~G~g~~~p~~g~~V~v~y~~~~~~-g~~~d~~~~~~~~~~~~~~lg~~-~~~~gle~~l~~m~~Ge~~~i 346 (492)
++++.++++++|.| ..|..||.|+|||++++.+ |++||+++ ....|+.|.+|.+ ++++||+.+|.+|++||++.|
T Consensus 48 ~~~~~~~~~~~g~g-~~~~~gd~v~v~y~g~~~~~g~~fd~~~--~~~~~~~~~lg~~~~~i~g~e~~l~~m~~Ge~~~~ 124 (338)
T 2if4_A 48 DEKVSKQIIKEGHG-SKPSKYSTCFLHYRAWTKNSQHKFEDTW--HEQQPIELVLGKEKKELAGLAIGVASMKSGERALV 124 (338)
T ss_dssp ETTEEEEEEECCBS-CCCCTTCEEEEEEEEEETTTCCCCEEHH--HHTCCEEEETTSCCGGGHHHHHHHHHCCBTCEEEE
T ss_pred CCCeEEEEEeCCCC-CCCCCCCEEEEEEEEEEcCCCcEeeccc--CCCCCeEEEcCCCCcccHHHHHHHhcCCCCCeEEE
Confidence 56899999999999 6999999999999999985 99999986 3567999999999 899999999999999999999
Q ss_pred EECCCCccCCCccccccccCCCCccEEEEEEEeeeeecc---cCCCCChHHHHHHHHHHHHhhhHHHHcccHHHHHHHHH
Q 011164 347 TIAPEYAFGSAESQQELAVVPPNSTVHYEVELVSFEKEK---ESWDMNTEEKIEAAGKKKEQGNTLFKAGKYARASKRYE 423 (492)
Q Consensus 347 ~ip~~~~yg~~~~~~~~~~ip~~~~l~~~v~l~~~~~~~---~~~~~~~~e~l~~a~~~K~~Gn~~fk~~~~~~A~~~Y~ 423 (492)
.|||.++||..+... .+.||++++++|.|+|+++.... ..|.++.+++++.+..++..|+.+|++++|.+|+..|+
T Consensus 125 ~i~~~~~yg~~~~~~-~~~ip~~~~l~f~v~L~~~~~~~e~~~~~~~~~~~~~~~a~~~~~~g~~~~~~g~~~~A~~~y~ 203 (338)
T 2if4_A 125 HVGWELAYGKEGNFS-FPNVPPMADLLYEVEVIGFDETKEGKARSDMTVEERIGAADRRKMDGNSLFKEEKLEEAMQQYE 203 (338)
T ss_dssp EECGGGSSCSSCCCS-SSCCCTTCCEEEEEEEEEEECCCCCBTTTBCCHHHHHHHHHHHHHHHHHTCSSSCCHHHHHHHH
T ss_pred EECHHHhcCCCCCCC-CCCCCCCCcEEEEEEEEEecCCccccccccCCHHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHH
Confidence 999999999987631 24699999999999999998744 47889999999999999999999999999999999999
Q ss_pred HHHHHhcccC--CCChHHHHHHHHHHHHhHhHHHHHHHHhcCHHHHHHHHHHHHhcCCCCccceeeeecc
Q 011164 424 KAVKYIEYDT--SFGDEEKKQAKALKVACNLNNAACKLKLKDYKQAEKLCTKVQQQKKFLLLPIFNIYAR 491 (492)
Q Consensus 424 ~al~~l~~~~--~~~~~~~~~~~~~~~~l~~N~a~~~lk~~~~~~ai~~~~~al~~dp~n~KA~~r~~~~ 491 (492)
+|+++..... ............+...+|+|+|.||+++++|++|+.+|++||+++|+|.+|+||+..+
T Consensus 204 ~Al~~~p~~~~~~~~~~~~~~~~~l~~~~~~nla~~~~~~g~~~~A~~~~~~al~~~p~~~~a~~~lg~a 273 (338)
T 2if4_A 204 MAIAYMGDDFMFQLYGKYQDMALAVKNPCHLNIAACLIKLKRYDEAIGHCNIVLTEEEKNPKALFRRGKA 273 (338)
T ss_dssp HHHHHSCHHHHHTCCHHHHHHHHHHHTHHHHHHHHHHHTTTCCHHHHHHHHHHHHHCTTCHHHHHHHHHH
T ss_pred HHHHHhccchhhhhcccHHHHHHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHH
Confidence 9999864321 1112233445566678999999999999999999999999999999999999987643
No 6
>1p5q_A FKBP52, FK506-binding protein 4; isomerase; 2.80A {Homo sapiens} SCOP: a.118.8.1 d.26.1.1 PDB: 1qz2_A
Probab=99.97 E-value=6.8e-30 Score=254.45 Aligned_cols=218 Identities=38% Similarity=0.664 Sum_probs=199.1
Q ss_pred eeeeeCCccEEEEEEecCCCCCCCCCCCEEEEEEEEEEcCCcEEEEcCCCCCcccEEEEcCCcc---cchhHHHHHhccC
Q 011164 263 VSEITDDKKVIKKILKEGDGFERPNEGAVVKVKLIGKLQDGTVFVKKGHSEEEQLFEFKTDEEQ---VIDGLDRAVITMK 339 (492)
Q Consensus 263 ~~d~~~d~~v~k~il~~G~g~~~p~~g~~V~v~y~~~~~~g~~~d~~~~~~~~~~~~~~lg~~~---~~~gle~~l~~m~ 339 (492)
+.+++.|++++|+|+++|.|..+|..|+.|+|||++++ +|++||++ |+.|.+|.|. ++++|+.||.+|+
T Consensus 18 ~~~~~~~~~~~~~~~~~g~g~~~p~~~~~v~v~y~g~~-~g~~fd~~-------~~~f~lG~g~~~~~~~~~e~al~~~~ 89 (336)
T 1p5q_A 18 GSHMEEDGGIIRRIQTRGEGYAKPNEGAIVEVALEGYY-KDKLFDQR-------ELRFEIGEGENLDLPYGLERAIQRME 89 (336)
T ss_dssp ----CCTTSEEEEEEECCCCSCCCCTTCEEEEEEEEEE-TTEEEEEE-------EEEEETTCGGGGTCCHHHHHHHTTCC
T ss_pred ceeecCCCcEEEEEEeCCCCCCCCCCCCeEEEEEEEEE-CCEEEecC-------CeEEEeCCCCccccchHHHHHHhcCC
Confidence 45667899999999999999778999999999999999 99999875 7999999886 5899999999999
Q ss_pred cCcEEEEEECCCCccCCCccccccccCCCCccEEEEEEEeeeeecccCCCCChHHHHHHHHHHHHhhhHHHHcccHHHHH
Q 011164 340 KNEVALLTIAPEYAFGSAESQQELAVVPPNSTVHYEVELVSFEKEKESWDMNTEEKIEAAGKKKEQGNTLFKAGKYARAS 419 (492)
Q Consensus 340 ~Ge~~~i~ip~~~~yg~~~~~~~~~~ip~~~~l~~~v~l~~~~~~~~~~~~~~~e~l~~a~~~K~~Gn~~fk~~~~~~A~ 419 (492)
+||++.|.++|+++||..|... ..||+++.+.|++.|.++.+....|.+..+.....+..++..|+.+|+.|+|.+|+
T Consensus 90 ~Ge~~~l~i~p~~ayg~~g~~~--~~i~~~~~l~f~~~L~~~~~A~~~~~~a~~~~p~~a~~~~~~g~~~~~~g~~~~A~ 167 (336)
T 1p5q_A 90 KGEHSIVYLKPSYAFGSVGKEK--FQIPPNAELKYELHLKSFEKAKESWEMNSEEKLEQSTIVKERGTVYFKEGKYKQAL 167 (336)
T ss_dssp TTCEEEEEECTTTTTTTTCBGG--GTBCSSCCEEEEEEEEEEECCCCGGGCCHHHHHHHHHHHHHHHHHHHHHTCHHHHH
T ss_pred CCCeEEEEECCccccCcCCCCc--cCCCCCCeEEEEEEEeecccccchhcCCHHHHHHHHHHHHHHHHHHHHCCCHHHHH
Confidence 9999999999999999988652 35899999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHhcccCCCChHHHHHHHHHHHHhHhHHHHHHHHhcCHHHHHHHHHHHHhcCCCCccceeeeec
Q 011164 420 KRYEKAVKYIEYDTSFGDEEKKQAKALKVACNLNNAACKLKLKDYKQAEKLCTKVQQQKKFLLLPIFNIYA 490 (492)
Q Consensus 420 ~~Y~~al~~l~~~~~~~~~~~~~~~~~~~~l~~N~a~~~lk~~~~~~ai~~~~~al~~dp~n~KA~~r~~~ 490 (492)
..|++|+++.........+......+....+++|+|.|++++++|++|+.+|++||+++|++.+++|++..
T Consensus 168 ~~y~~Al~~~p~~~~~~~~~~~~~~~~~~~~~~nla~~~~~~g~~~~A~~~~~~al~~~p~~~~a~~~lg~ 238 (336)
T 1p5q_A 168 LQYKKIVSWLEYESSFSNEEAQKAQALRLASHLNLAMCHLKLQAFSAAIESCNKALELDSNNEKGLSRRGE 238 (336)
T ss_dssp HHHHHHHHHTTTCCCCCSHHHHHHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHH
T ss_pred HHHHHHHHHhhccccCChHHHHHHHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCcHHHHHHHHH
Confidence 99999999987766666677788899999999999999999999999999999999999999999998754
No 7
>1yat_A FK506 binding protein; HET: FK5; 2.50A {Saccharomyces cerevisiae} SCOP: d.26.1.1
Probab=99.90 E-value=2.6e-23 Score=172.64 Aligned_cols=110 Identities=50% Similarity=0.861 Sum_probs=103.5
Q ss_pred ecCCCeEEEEEEcccCcCCCCCCCEEEEEEEEEecCCCEEeecCCCCCcEEEEcCCCcccHhHHHHhccCcCccEEEEEe
Q 011164 34 IGNQGLKKKLVKEGEGWDTPENGDEVEVHYTGTLLDGTQFDSSRDRSTPFKFTLGQGNVIKGWDIGIKTMKKGENAVFTI 113 (492)
Q Consensus 34 ~~~~g~~~~il~~G~G~~~~~~gd~V~v~Y~~~~~dg~~~~ss~~~~~p~~f~lg~~~~~~gle~~l~~m~~Ge~~~~~i 113 (492)
.+++|++|+++++|+|...++.||.|.+||++++.||++|++++.++.|+.|.+|.+++++||+++|.+|++|++++|.|
T Consensus 3 ~~~~g~~~~~~~~G~g~~~~~~gd~V~v~y~~~~~dG~~~d~s~~~~~p~~f~lG~~~~i~g~e~~l~gm~~Ge~~~v~i 82 (113)
T 1yat_A 3 VIEGNVKIDRISPGDGATFPKTGDLVTIHYTGTLENGQKFDSSVDRGSPFQCNIGVGQVIKGWDVGIPKLSVGEKARLTI 82 (113)
T ss_dssp ECGGGCEEEEEECCCSSCCCCTTCEEEEEEEEEETTSCEEEESTTTTCCEEEETTSSSSCHHHHHHGGGCCTTCEEEEEE
T ss_pred CCCCCeEEEEEECCCCcccCCCCCEEEEEEEEEECCCCEEEecCCCCCcEEEEeCCCCccHHHHHHHhCCCCCCEEEEEE
Confidence 47789999999999994339999999999999999999999998877899999999999999999999999999999999
Q ss_pred cCCcccCCCCCCCCCCCCCceEEEEEEEEE
Q 011164 114 PPELAYGESGSPPTIPPNATLQFDVELLSW 143 (492)
Q Consensus 114 ~~~~ayg~~~~~~~i~~~~~l~~~vel~~~ 143 (492)
||++|||+.+.++.||++++++|+|+|+++
T Consensus 83 p~~~ayG~~~~~~~Ip~~~~l~f~vel~~i 112 (113)
T 1yat_A 83 PGPYAYGPRGFPGLIPPNSTLVFDVELLKV 112 (113)
T ss_dssp CGGGTTTTTCBTTTBCTTCCEEEEEEEEEE
T ss_pred CHHHCcCCCCCCCCcCCCCeEEEEEEEEEe
Confidence 999999999987789999999999999886
No 8
>3kz7_A FK506-binding protein 3; FKPB ppiase rapamycin, isomerase, nucleus, phosphoprotein, R isomerase-inhibitor complex; HET: RAP; 1.95A {Mus musculus} SCOP: d.26.1.1 PDB: 1pbk_A*
Probab=99.90 E-value=2.5e-23 Score=174.42 Aligned_cols=109 Identities=46% Similarity=0.832 Sum_probs=102.1
Q ss_pred cCCCeEEEEEEcccCcCCCCCCCEEEEEEEEEecCCCEEeecCCC-------CCcEEEEcCCCcccHhHHHHhccCcCcc
Q 011164 35 GNQGLKKKLVKEGEGWDTPENGDEVEVHYTGTLLDGTQFDSSRDR-------STPFKFTLGQGNVIKGWDIGIKTMKKGE 107 (492)
Q Consensus 35 ~~~g~~~~il~~G~G~~~~~~gd~V~v~Y~~~~~dg~~~~ss~~~-------~~p~~f~lg~~~~~~gle~~l~~m~~Ge 107 (492)
.|+|++|+++++|+|...|+.||.|.+||++++.||++|++|+.. +.|+.|.+|.+++++||+++|.+|++|+
T Consensus 2 ~p~g~~~~il~~G~g~~~p~~gd~V~v~Y~g~~~dG~~fdss~~~~~~~~~~~~p~~f~lG~~~~i~G~e~~l~gm~~Ge 81 (119)
T 3kz7_A 2 GPPKYTKSILKKGDKTNFPKKGDVVHCWYTGTLPDGTVFDTNIQTSSKKKKNAKPLSFKVGVGKVIRGWDEALLTMSKGE 81 (119)
T ss_dssp CSCSEEEEEEECCCSSCCCCTTCEEEEEEEEECTTSCEEEECCCCSSSTTTTCCCEEEETTSSSSCHHHHHHHTTCCTTC
T ss_pred CCCccEEEEEEcCCCCCcCCCCCEEEEEEEEEECCCCEEEeccccccccccCCCCEEEEECCCChhHHHHHHHhCCCCCC
Confidence 579999999999999667999999999999999999999999863 4899999999999999999999999999
Q ss_pred EEEEEecCCcccCCCCCCC-CCCCCCceEEEEEEEEE
Q 011164 108 NAVFTIPPELAYGESGSPP-TIPPNATLQFDVELLSW 143 (492)
Q Consensus 108 ~~~~~i~~~~ayg~~~~~~-~i~~~~~l~~~vel~~~ 143 (492)
+++|.|||++|||+.+.+. .||++++|+|+|+|+++
T Consensus 82 ~~~v~ip~~~aYG~~g~~~~~Ip~~~~l~f~veL~~i 118 (119)
T 3kz7_A 82 KARLEIEPEWAYGKKGQPDAKIPPNTKLIFEVELVDI 118 (119)
T ss_dssp EEEEEECGGGTTCTTCBGGGTBCTTCCEEEEEEEEEE
T ss_pred EEEEEECcHHhcCCCCCCCCccCcCCeEEEEEEEEEe
Confidence 9999999999999998864 79999999999999986
No 9
>1r9h_A FKB-6, FK506 binding protein family; structural genomics, peptidylprolyl isomerase, PSI, protein structure initiative; 1.80A {Caenorhabditis elegans} SCOP: d.26.1.1
Probab=99.90 E-value=1.9e-23 Score=178.64 Aligned_cols=112 Identities=55% Similarity=0.988 Sum_probs=105.5
Q ss_pred cCCCeEEEEEEcccCcCCCCCCCEEEEEEEEEecCCCEEeecCCCCCcEEEEcCCCcccHhHHHHhccCcCccEEEEEec
Q 011164 35 GNQGLKKKLVKEGEGWDTPENGDEVEVHYTGTLLDGTQFDSSRDRSTPFKFTLGQGNVIKGWDIGIKTMKKGENAVFTIP 114 (492)
Q Consensus 35 ~~~g~~~~il~~G~G~~~~~~gd~V~v~Y~~~~~dg~~~~ss~~~~~p~~f~lg~~~~~~gle~~l~~m~~Ge~~~~~i~ 114 (492)
+++|++|+++++|+|...|+.||.|.+||++++.||++|++|+.++.|+.|.+|.+++++||+++|.+|++|++++|.||
T Consensus 12 ~~~gl~~~~l~~G~g~~~~~~gd~V~v~Y~g~~~dG~~fdss~~~~~p~~f~lG~~~vi~G~e~~l~gm~~Ge~~~v~ip 91 (135)
T 1r9h_A 12 KDGGVLKLIKKEGQGVVKPTTGTTVKVHYVGTLENGTKFDSSRDRGDQFSFNLGRGNVIKGWDLGVATMTKGEVAEFTIR 91 (135)
T ss_dssp CCSSEEEEEEECCBSSCCCCTTCEEEEEEEEEETTSCEEEEHHHHTSCEEEETTTTSSCHHHHHHHTTCCBTCEEEEEEC
T ss_pred CCCcEEEEEEEccCCCcCCCCCCEEEEEEEEEECCCCEEEecCcCCCCEEEEeCCCCccHHHHHHHhcCCCCCEEEEEEC
Confidence 68999999999999955799999999999999999999999986668999999999999999999999999999999999
Q ss_pred CCcccCCCCCCCCCCCCCceEEEEEEEEEeec
Q 011164 115 PELAYGESGSPPTIPPNATLQFDVELLSWTSV 146 (492)
Q Consensus 115 ~~~ayg~~~~~~~i~~~~~l~~~vel~~~~~~ 146 (492)
|++|||+.+.++.||++++++|+|+|+++...
T Consensus 92 ~~~aYG~~g~~~~Ip~~~~l~f~v~l~~i~~~ 123 (135)
T 1r9h_A 92 SDYGYGDAGSPPKIPGGATLIFEVELFEWSAE 123 (135)
T ss_dssp GGGTTTTTCBTTTBCTTCCEEEEEEEEEEEC-
T ss_pred hHHcCCCCCCCCCcCcCCcEEEEEEEEEeecC
Confidence 99999999988899999999999999999764
No 10
>3o5e_A Peptidyl-prolyl CIS-trans isomerase FKBP5; FK-506 binding domain, HSP90 cochaperone, immunophiline, PEP prolyl isomerase; 1.60A {Homo sapiens} PDB: 3o5f_A
Probab=99.90 E-value=2.5e-23 Score=179.83 Aligned_cols=110 Identities=53% Similarity=0.913 Sum_probs=105.5
Q ss_pred cCCCeEEEEEEcccCcCCCCCCCEEEEEEEEEecCCCEEeecCCCCCcEEEEcCCCcccHhHHHHhccCcCccEEEEEec
Q 011164 35 GNQGLKKKLVKEGEGWDTPENGDEVEVHYTGTLLDGTQFDSSRDRSTPFKFTLGQGNVIKGWDIGIKTMKKGENAVFTIP 114 (492)
Q Consensus 35 ~~~g~~~~il~~G~G~~~~~~gd~V~v~Y~~~~~dg~~~~ss~~~~~p~~f~lg~~~~~~gle~~l~~m~~Ge~~~~~i~ 114 (492)
.++|++|+++++|+|...|..||.|.|||++++.||++|++|+.++.|+.|.+|.+++++||+++|.+|++||+++|.||
T Consensus 33 ~d~gv~~~i~~~G~G~~~p~~gd~V~v~Y~g~~~dG~~fdss~~~~~p~~f~lG~g~~i~G~e~~l~gm~~Ge~~~v~ip 112 (144)
T 3o5e_A 33 KDRGVLKIVKRVGNGEETPMIGDKVYVHYKGKLSNGKKFDSSHDRNEPFVFSLGKGQVIKAWDIGVATMKKGEICHLLCK 112 (144)
T ss_dssp CSSSEEEEEEECCBSSCCCCTTCEEEEEEEEECTTSCEEEESGGGTSCEEEETTSSSSCHHHHHHHTTCCBTCEEEEEEC
T ss_pred CCCeEEEEEEECCCCCccCCCCCEEEEEEEEEECCCCEEEeecccCCCeEEEeCCCcccHHHHHHHhCCCCCCEEEEEEC
Confidence 68999999999999965899999999999999999999999988789999999999999999999999999999999999
Q ss_pred CCcccCCCCCCCCCCCCCceEEEEEEEEEe
Q 011164 115 PELAYGESGSPPTIPPNATLQFDVELLSWT 144 (492)
Q Consensus 115 ~~~ayg~~~~~~~i~~~~~l~~~vel~~~~ 144 (492)
|++|||..+.++.||++++|+|+|+|+++.
T Consensus 113 p~~aYG~~g~~~~Ipp~~~L~f~VeL~~ik 142 (144)
T 3o5e_A 113 PEYAYGSAGSLPKIPSNATLFFEIELLDFK 142 (144)
T ss_dssp GGGTTTTTCBTTTBCTTCCEEEEEEEEEEE
T ss_pred hHHCcCCCCCCCCcCCCCeEEEEEEEEEec
Confidence 999999999888999999999999999985
No 11
>3o5q_A Peptidyl-prolyl CIS-trans isomerase FKBP5; FK-506 binding domain, HSP90 cochaperone, immunophiline, PEP prolyl isomerase; 0.96A {Homo sapiens} PDB: 3o5m_A 3o5l_A 3o5o_A 3o5p_A 3o5r_A* 4drk_A* 4drm_A* 4drn_A* 4dro_A* 4drp_A* 4drq_A* 3o5j_A 3o5g_A 3o5i_A 3o5k_A
Probab=99.90 E-value=2.2e-23 Score=176.80 Aligned_cols=111 Identities=52% Similarity=0.906 Sum_probs=105.4
Q ss_pred cCCCeEEEEEEcccCcCCCCCCCEEEEEEEEEecCCCEEeecCCCCCcEEEEcCCCcccHhHHHHhccCcCccEEEEEec
Q 011164 35 GNQGLKKKLVKEGEGWDTPENGDEVEVHYTGTLLDGTQFDSSRDRSTPFKFTLGQGNVIKGWDIGIKTMKKGENAVFTIP 114 (492)
Q Consensus 35 ~~~g~~~~il~~G~G~~~~~~gd~V~v~Y~~~~~dg~~~~ss~~~~~p~~f~lg~~~~~~gle~~l~~m~~Ge~~~~~i~ 114 (492)
.++|++|+++++|+|...|+.||.|.|||++++.||++|++|+.++.|+.|.+|.+++++||+++|.+|++|++++|.||
T Consensus 17 ~d~gv~~~i~~~G~G~~~p~~gd~V~v~Y~g~~~dG~~fdss~~~~~p~~f~lG~g~~i~G~e~~l~gm~~Ge~~~v~ip 96 (128)
T 3o5q_A 17 KDRGVLKIVKRVGNGEETPMIGDKVYVHYKGKLSNGKKFDSSHDRNEPFVFSLGKGQVIKAWDIGVATMKKGEICHLLCK 96 (128)
T ss_dssp CSSSEEEEEEECCSSSCCCCTTCEEEEEEEEEETTSCEEEEHHHHTSCEEEETTSSSSCHHHHHHHTTCCTTCEEEEEEC
T ss_pred CCCCEEEEEEECCCCCccCCCCCEEEEEEEEEECCCCEEEecCCCCCCEEEEECCCCccHHHHHHHhcCCCCCEEEEEEC
Confidence 77899999999999955799999999999999999999999987678999999999999999999999999999999999
Q ss_pred CCcccCCCCCCCCCCCCCceEEEEEEEEEee
Q 011164 115 PELAYGESGSPPTIPPNATLQFDVELLSWTS 145 (492)
Q Consensus 115 ~~~ayg~~~~~~~i~~~~~l~~~vel~~~~~ 145 (492)
|++|||+.+.++.||++++|+|+|+|+++..
T Consensus 97 ~~~aYG~~g~~~~Ip~~~~l~f~vel~~i~~ 127 (128)
T 3o5q_A 97 PEYAYGSAGSLPKIPSNATLFFEIELLDFKG 127 (128)
T ss_dssp GGGTTTTTCBTTTBCTTCCEEEEEEEEEEEC
T ss_pred hHHcCCCCCCCCCcCCCCEEEEEEEEEEecC
Confidence 9999999998889999999999999999853
No 12
>3b7x_A FK506-binding protein 6; isomerase, repeat, rotamase, TPR repeat, williams-beuren syndrome, structural genomics consortium, SGC; 2.10A {Homo sapiens}
Probab=99.90 E-value=4.3e-24 Score=182.41 Aligned_cols=126 Identities=36% Similarity=0.638 Sum_probs=106.4
Q ss_pred CCCCCCcccccccee--eecCCCeEEEEEEcccCcCCCCCCCEEEEEEEEEec-CCCEEeecCCCCCcEEEEcCCCcccH
Q 011164 18 DLPDDAPMMKVGEEK--EIGNQGLKKKLVKEGEGWDTPENGDEVEVHYTGTLL-DGTQFDSSRDRSTPFKFTLGQGNVIK 94 (492)
Q Consensus 18 ~~~~~~~~~~~~~~~--~~~~~g~~~~il~~G~G~~~~~~gd~V~v~Y~~~~~-dg~~~~ss~~~~~p~~f~lg~~~~~~ 94 (492)
..+...||.+++++. .++++|++|+++++|+| ..+..||.|.|||++++. +|++|++++.++.|+.|.+|.+++++
T Consensus 5 ~~~~~~~~~~~~~~~~~v~~~~gl~~~vl~~G~g-~~~~~gd~V~v~Y~g~l~~~G~~fdss~~~~~p~~f~lG~g~~i~ 83 (134)
T 3b7x_A 5 DAPGQSLYERLSQRMLDISGDRGVLKDVIREGAG-DLVAPDASVLVKYSGYLEHMDRPFDSNYFRKTPRLMKLGEDITLW 83 (134)
T ss_dssp ----CCHHHHHTTTCEESSSSSSEEEEEEECCEE-EECCTTCEEEEEEEEECTTCSSCSEEC-------CEEC-CCCCCH
T ss_pred cCCCCChhHHhccccceeeCCCCEEEEEEEcCCC-CCCCCCCEEEEEEEEEECCCCeEEEecCCCCCCEEEEcCCcchhH
Confidence 345678888877776 45899999999999999 678899999999999998 69999999877789999999999999
Q ss_pred hHHHHhccCcCccEEEEEecCCcccCCCCCCCCCCCCCceEEEEEEEEEe
Q 011164 95 GWDIGIKTMKKGENAVFTIPPELAYGESGSPPTIPPNATLQFDVELLSWT 144 (492)
Q Consensus 95 gle~~l~~m~~Ge~~~~~i~~~~ayg~~~~~~~i~~~~~l~~~vel~~~~ 144 (492)
||+++|.+|++||+++|.|||++|||+.+.++.||++++++|+|+|+++.
T Consensus 84 G~e~aL~gm~~Ge~~~v~ip~~~aYG~~~~~~~Ip~~~~l~f~VeL~~i~ 133 (134)
T 3b7x_A 84 GMELGLLSMRRGELARFLFKPNYAYGTLGCPPLIPPNTTVLFEIELLDFL 133 (134)
T ss_dssp HHHHHHHTCEETCEEEEEECGGGTTTTTCBTTTBCTTCCEEEEEEEEEEC
T ss_pred HHHHHHhCCCCCCEEEEEECHHHCcCCCCCCCCcCcCCeEEEEEEEEEEe
Confidence 99999999999999999999999999999887899999999999999874
No 13
>3o5e_A Peptidyl-prolyl CIS-trans isomerase FKBP5; FK-506 binding domain, HSP90 cochaperone, immunophiline, PEP prolyl isomerase; 1.60A {Homo sapiens} PDB: 3o5f_A
Probab=99.90 E-value=3.8e-23 Score=178.71 Aligned_cols=116 Identities=39% Similarity=0.599 Sum_probs=106.8
Q ss_pred ceeeee--CCccEEEEEEecCCCCCCCCCCCEEEEEEEEEEcCCcEEEEcCCCCCcccEEEEcCCcccchhHHHHHhccC
Q 011164 262 TVSEIT--DDKKVIKKILKEGDGFERPNEGAVVKVKLIGKLQDGTVFVKKGHSEEEQLFEFKTDEEQVIDGLDRAVITMK 339 (492)
Q Consensus 262 ~~~d~~--~d~~v~k~il~~G~g~~~p~~g~~V~v~y~~~~~~g~~~d~~~~~~~~~~~~~~lg~~~~~~gle~~l~~m~ 339 (492)
...|++ .|++++++++++|.|...|..||.|+|||++++.||++||+++ ....|+.|.+|.+++++||+.+|.+|+
T Consensus 25 ~~~di~~~~d~gv~~~i~~~G~G~~~p~~gd~V~v~Y~g~~~dG~~fdss~--~~~~p~~f~lG~g~~i~G~e~~l~gm~ 102 (144)
T 3o5e_A 25 QGEDITSKKDRGVLKIVKRVGNGEETPMIGDKVYVHYKGKLSNGKKFDSSH--DRNEPFVFSLGKGQVIKAWDIGVATMK 102 (144)
T ss_dssp HCEECCSSCSSSEEEEEEECCBSSCCCCTTCEEEEEEEEECTTSCEEEESG--GGTSCEEEETTSSSSCHHHHHHHTTCC
T ss_pred ccccccccCCCeEEEEEEECCCCCccCCCCCEEEEEEEEEECCCCEEEeec--ccCCCeEEEeCCCcccHHHHHHHhCCC
Confidence 346666 6899999999999996689999999999999999999999986 356899999999999999999999999
Q ss_pred cCcEEEEEECCCCccCCCccccccccCCCCccEEEEEEEeeee
Q 011164 340 KNEVALLTIAPEYAFGSAESQQELAVVPPNSTVHYEVELVSFE 382 (492)
Q Consensus 340 ~Ge~~~i~ip~~~~yg~~~~~~~~~~ip~~~~l~~~v~l~~~~ 382 (492)
+||+++|.|||++|||..+.+ +.|||+++|+|+|+|++|.
T Consensus 103 ~Ge~~~v~ipp~~aYG~~g~~---~~Ipp~~~L~f~VeL~~ik 142 (144)
T 3o5e_A 103 KGEICHLLCKPEYAYGSAGSL---PKIPSNATLFFEIELLDFK 142 (144)
T ss_dssp BTCEEEEEECGGGTTTTTCBT---TTBCTTCCEEEEEEEEEEE
T ss_pred CCCEEEEEEChHHCcCCCCCC---CCcCCCCeEEEEEEEEEec
Confidence 999999999999999998875 5799999999999999986
No 14
>2f4e_A ATFKBP42; FKBP-like, alpha-beta, signaling protein; 2.32A {Arabidopsis thaliana}
Probab=99.90 E-value=3.1e-23 Score=185.71 Aligned_cols=129 Identities=34% Similarity=0.493 Sum_probs=104.2
Q ss_pred CCccEEEEEEecCCCCCCCCCCCEEEEEEEEEEc-CCcEEEEcCCCCCcccEEEEcCCc-ccchhHHHHHhccCcCcEEE
Q 011164 268 DDKKVIKKILKEGDGFERPNEGAVVKVKLIGKLQ-DGTVFVKKGHSEEEQLFEFKTDEE-QVIDGLDRAVITMKKNEVAL 345 (492)
Q Consensus 268 ~d~~v~k~il~~G~g~~~p~~g~~V~v~y~~~~~-~g~~~d~~~~~~~~~~~~~~lg~~-~~~~gle~~l~~m~~Ge~~~ 345 (492)
.++++.++++++|.| ..|..||.|+|||++++. +|++|++++. ...|+.|.+|.+ ++++||+.+|.+|++||+++
T Consensus 47 ~~~gl~~~vl~~G~G-~~~~~Gd~V~v~Y~g~l~~dG~~fdss~~--~~~p~~f~lG~g~~vi~G~eeaL~gMk~Ge~~~ 123 (180)
T 2f4e_A 47 LDEKVSKQIIKEGHG-SKPSKYSTCFLHYRAWTKNSQHKFEDTWH--EQQPIELVLGKEKKELAGLAIGVASMKSGERAL 123 (180)
T ss_dssp EETTEEEEEEECCBS-CCBCTTCEEEEEEEEEETTTCCEEEETTT--TTCCEEEETTSCCGGGHHHHHHHTTCCBTCEEE
T ss_pred CCCceEEEEEeCCCC-CCCCCCCEEEEEEEEEECCCCcEEeccCc--cCCCEEEEeCCCCchhHHHHHHHhCCCCCCEEE
Confidence 356899999999999 799999999999999998 5999999863 568999999999 99999999999999999999
Q ss_pred EEECCCCccCCCccccccccCCCCccEEEEEEEeeeeeccc---CCCCChHHHHHHHH
Q 011164 346 LTIAPEYAFGSAESQQELAVVPPNSTVHYEVELVSFEKEKE---SWDMNTEEKIEAAG 400 (492)
Q Consensus 346 i~ip~~~~yg~~~~~~~~~~ip~~~~l~~~v~l~~~~~~~~---~~~~~~~e~l~~a~ 400 (492)
|.|||++|||..+... .+.|||+++|+|+|+|+++.+..+ .|.|+.+|+++.|.
T Consensus 124 v~iPp~~aYG~~g~~~-~~~Ip~~s~l~F~VeL~~v~~~~e~~~~~~mt~eErl~~A~ 180 (180)
T 2f4e_A 124 VHVGWELAYGKEGNFS-FPNVPPMADLLYEVEVIGFDETKEGKARSDMTVEERIGAAD 180 (180)
T ss_dssp EEECGGGTTTTTCBSS-SSCBCTTCCEEEEEEEEEESCBCCC----------------
T ss_pred EEECchHhCCcCCccc-CCCcCCCCeEEEEEEEEEEecCccccccccCCHHHHHhhcC
Confidence 9999999999887631 246999999999999999998877 89999999998763
No 15
>3kz7_A FK506-binding protein 3; FKPB ppiase rapamycin, isomerase, nucleus, phosphoprotein, R isomerase-inhibitor complex; HET: RAP; 1.95A {Mus musculus} SCOP: d.26.1.1 PDB: 1pbk_A*
Probab=99.90 E-value=8.2e-23 Score=171.28 Aligned_cols=112 Identities=40% Similarity=0.627 Sum_probs=101.3
Q ss_pred CccEEEEEEecCCCCCCCCCCCEEEEEEEEEEcCCcEEEEcCCC-----CCcccEEEEcCCcccchhHHHHHhccCcCcE
Q 011164 269 DKKVIKKILKEGDGFERPNEGAVVKVKLIGKLQDGTVFVKKGHS-----EEEQLFEFKTDEEQVIDGLDRAVITMKKNEV 343 (492)
Q Consensus 269 d~~v~k~il~~G~g~~~p~~g~~V~v~y~~~~~~g~~~d~~~~~-----~~~~~~~~~lg~~~~~~gle~~l~~m~~Ge~ 343 (492)
+++++|+++++|+|...|..||.|++||++++.||++||+++.. ....|+.|.+|.+++++||+.+|.+|++||+
T Consensus 3 p~g~~~~il~~G~g~~~p~~gd~V~v~Y~g~~~dG~~fdss~~~~~~~~~~~~p~~f~lG~~~~i~G~e~~l~gm~~Ge~ 82 (119)
T 3kz7_A 3 PPKYTKSILKKGDKTNFPKKGDVVHCWYTGTLPDGTVFDTNIQTSSKKKKNAKPLSFKVGVGKVIRGWDEALLTMSKGEK 82 (119)
T ss_dssp SCSEEEEEEECCCSSCCCCTTCEEEEEEEEECTTSCEEEECCCCSSSTTTTCCCEEEETTSSSSCHHHHHHHTTCCTTCE
T ss_pred CCccEEEEEEcCCCCCcCCCCCEEEEEEEEEECCCCEEEeccccccccccCCCCEEEEECCCChhHHHHHHHhCCCCCCE
Confidence 57899999999999767999999999999999999999998631 1248999999999999999999999999999
Q ss_pred EEEEECCCCccCCCccccccccCCCCccEEEEEEEeeee
Q 011164 344 ALLTIAPEYAFGSAESQQELAVVPPNSTVHYEVELVSFE 382 (492)
Q Consensus 344 ~~i~ip~~~~yg~~~~~~~~~~ip~~~~l~~~v~l~~~~ 382 (492)
++|.|||++|||..+.+. ..|||+++|+|+|+|++++
T Consensus 83 ~~v~ip~~~aYG~~g~~~--~~Ip~~~~l~f~veL~~i~ 119 (119)
T 3kz7_A 83 ARLEIEPEWAYGKKGQPD--AKIPPNTKLIFEVELVDID 119 (119)
T ss_dssp EEEEECGGGTTCTTCBGG--GTBCTTCCEEEEEEEEEEC
T ss_pred EEEEECcHHhcCCCCCCC--CccCcCCeEEEEEEEEEeC
Confidence 999999999999988752 4699999999999999874
No 16
>3o5q_A Peptidyl-prolyl CIS-trans isomerase FKBP5; FK-506 binding domain, HSP90 cochaperone, immunophiline, PEP prolyl isomerase; 0.96A {Homo sapiens} PDB: 3o5m_A 3o5l_A 3o5o_A 3o5p_A 3o5r_A* 4drk_A* 4drm_A* 4drn_A* 4dro_A* 4drp_A* 4drq_A* 3o5j_A 3o5g_A 3o5i_A 3o5k_A
Probab=99.89 E-value=7e-23 Score=173.65 Aligned_cols=115 Identities=39% Similarity=0.611 Sum_probs=105.0
Q ss_pred eeee--CCccEEEEEEecCCCCCCCCCCCEEEEEEEEEEcCCcEEEEcCCCCCcccEEEEcCCcccchhHHHHHhccCcC
Q 011164 264 SEIT--DDKKVIKKILKEGDGFERPNEGAVVKVKLIGKLQDGTVFVKKGHSEEEQLFEFKTDEEQVIDGLDRAVITMKKN 341 (492)
Q Consensus 264 ~d~~--~d~~v~k~il~~G~g~~~p~~g~~V~v~y~~~~~~g~~~d~~~~~~~~~~~~~~lg~~~~~~gle~~l~~m~~G 341 (492)
.|+. .|++++++++++|+|...|..||.|+|||++++.||++||+++ ....|+.|.+|.+++++||+.+|.+|++|
T Consensus 11 ~di~~~~d~gv~~~i~~~G~G~~~p~~gd~V~v~Y~g~~~dG~~fdss~--~~~~p~~f~lG~g~~i~G~e~~l~gm~~G 88 (128)
T 3o5q_A 11 EDITSKKDRGVLKIVKRVGNGEETPMIGDKVYVHYKGKLSNGKKFDSSH--DRNEPFVFSLGKGQVIKAWDIGVATMKKG 88 (128)
T ss_dssp EECCSSCSSSEEEEEEECCSSSCCCCTTCEEEEEEEEEETTSCEEEEHH--HHTSCEEEETTSSSSCHHHHHHHTTCCTT
T ss_pred ceecccCCCCEEEEEEECCCCCccCCCCCEEEEEEEEEECCCCEEEecC--CCCCCEEEEECCCCccHHHHHHHhcCCCC
Confidence 4444 6889999999999996689999999999999999999999885 34679999999999999999999999999
Q ss_pred cEEEEEECCCCccCCCccccccccCCCCccEEEEEEEeeeee
Q 011164 342 EVALLTIAPEYAFGSAESQQELAVVPPNSTVHYEVELVSFEK 383 (492)
Q Consensus 342 e~~~i~ip~~~~yg~~~~~~~~~~ip~~~~l~~~v~l~~~~~ 383 (492)
|+++|.|||++|||..+.. +.|||+++|+|+|+|+++..
T Consensus 89 e~~~v~ip~~~aYG~~g~~---~~Ip~~~~l~f~vel~~i~~ 127 (128)
T 3o5q_A 89 EICHLLCKPEYAYGSAGSL---PKIPSNATLFFEIELLDFKG 127 (128)
T ss_dssp CEEEEEECGGGTTTTTCBT---TTBCTTCCEEEEEEEEEEEC
T ss_pred CEEEEEEChHHcCCCCCCC---CCcCCCCEEEEEEEEEEecC
Confidence 9999999999999998875 47999999999999999863
No 17
>2ppn_A FK506-binding protein 1A; high resolution protein structure, isomerase; 0.92A {Homo sapiens} SCOP: d.26.1.1 PDB: 1b6c_A 1a7x_A 1d7h_A 1d7i_A 1d7j_A* 1f40_A* 1fap_A* 1d6o_A* 1fkd_A* 1fkf_A* 1fkg_A* 1fkh_A* 1fki_A* 1fkj_A* 1fkr_A 1fks_A 1fkt_A 1j4h_A* 1j4i_A* 1j4r_A* ...
Probab=99.89 E-value=5.9e-23 Score=168.81 Aligned_cols=106 Identities=51% Similarity=0.943 Sum_probs=100.0
Q ss_pred CeEEEEEEcccCcCCCCCCCEEEEEEEEEecCCCEEeecCCCCCcEEEEcCCCcccHhHHHHhccCcCccEEEEEecCCc
Q 011164 38 GLKKKLVKEGEGWDTPENGDEVEVHYTGTLLDGTQFDSSRDRSTPFKFTLGQGNVIKGWDIGIKTMKKGENAVFTIPPEL 117 (492)
Q Consensus 38 g~~~~il~~G~G~~~~~~gd~V~v~Y~~~~~dg~~~~ss~~~~~p~~f~lg~~~~~~gle~~l~~m~~Ge~~~~~i~~~~ 117 (492)
|++|+++++|+|...++.||.|.+||++++.||++|++++.++.|+.|.+|.+++++||+++|.+|++|++++|.|||++
T Consensus 1 Gl~~~~~~~G~g~~~~~~gd~V~v~y~~~~~dG~~~d~s~~~~~p~~f~lG~~~~i~g~~~~l~gm~~Ge~~~~~ip~~~ 80 (107)
T 2ppn_A 1 GVQVETISPGDGRTFPKRGQTCVVHYTGMLEDGKKFDSSRDRNKPFKFMLGKQEVIRGWEEGVAQMSVGQRAKLTISPDY 80 (107)
T ss_dssp CEEEEEEECCCSSCCCCTTCEEEEEEEEEETTSCEEEEHHHHTSCEEEETTSCCSCHHHHHHHTTCCTTCEEEEEECGGG
T ss_pred CcEEEEEECcCCCcCCCCCCEEEEEEEEEECCCCEEEecCCCCCCEEEEeCCCChHHHHHHHHhCCCCCCEEEEEECHHH
Confidence 78999999999944499999999999999999999999986668999999999999999999999999999999999999
Q ss_pred ccCCCCCCCCCCCCCceEEEEEEEEE
Q 011164 118 AYGESGSPPTIPPNATLQFDVELLSW 143 (492)
Q Consensus 118 ayg~~~~~~~i~~~~~l~~~vel~~~ 143 (492)
+||+.+.++.||++++++|+|+|+++
T Consensus 81 ayG~~~~~~~Ip~~~~l~f~v~l~~v 106 (107)
T 2ppn_A 81 AYGATGHPGIIPPHATLVFDVELLKL 106 (107)
T ss_dssp TTTTTCBTTTBCTTCCEEEEEEEEEE
T ss_pred ccCCCCCCCCcCCCCeEEEEEEEEEe
Confidence 99999987789999999999999886
No 18
>2y78_A Peptidyl-prolyl CIS-trans isomerase; MIP, ppiase, virulence; HET: SO4 GOL; 0.91A {Burkholderia pseudomallei} PDB: 2ke0_A 2ko7_A* 2l2s_A* 4dz2_A* 4dz3_A*
Probab=99.89 E-value=9.8e-23 Score=173.41 Aligned_cols=110 Identities=53% Similarity=0.881 Sum_probs=104.6
Q ss_pred eecCCCeEEEEEEcccCcCCCCCCCEEEEEEEEEecCCCEEeecCCCCCcEEEEcCCCcccHhHHHHhccCcCccEEEEE
Q 011164 33 EIGNQGLKKKLVKEGEGWDTPENGDEVEVHYTGTLLDGTQFDSSRDRSTPFKFTLGQGNVIKGWDIGIKTMKKGENAVFT 112 (492)
Q Consensus 33 ~~~~~g~~~~il~~G~G~~~~~~gd~V~v~Y~~~~~dg~~~~ss~~~~~p~~f~lg~~~~~~gle~~l~~m~~Ge~~~~~ 112 (492)
..+++|++|+++++|+| ..++.||.|.|||++++.||++|++++++++|+.|.+|.+++++||+++|.+|++||+++|.
T Consensus 24 ~~~~~gl~~~~l~~G~G-~~~~~gd~V~v~Y~g~~~dG~~fdss~~~~~p~~f~lG~g~vi~G~eeaL~gmk~Ge~~~v~ 102 (133)
T 2y78_A 24 VTTESGLKYEDLTEGSG-AEARAGQTVSVHYTGWLTDGQKFDSSKDRNDPFAFVLGGGMVIKGWDEGVQGMKVGGVRRLT 102 (133)
T ss_dssp EECTTSCEEEEEECCSS-CBCCTTSEEEEEEEEEETTSCEEEETTTTTCCEEEETTSSSSCHHHHHHSTTCBTTCEEEEE
T ss_pred EECCCCEEEEEEEcCCC-CCCCCCCEEEEEEEEEECCCCEEeccCcCCCCEEEEeCCCChhHHHHHHHcCCCCCCEEEEE
Confidence 45889999999999999 78999999999999999999999999877789999999999999999999999999999999
Q ss_pred ecCCcccCCCCCCCCCCCCCceEEEEEEEEE
Q 011164 113 IPPELAYGESGSPPTIPPNATLQFDVELLSW 143 (492)
Q Consensus 113 i~~~~ayg~~~~~~~i~~~~~l~~~vel~~~ 143 (492)
|||+++||+.+.+..||++++++|+|+|+++
T Consensus 103 ip~~~aYG~~~~~~~Ipp~~~l~f~VeL~~I 133 (133)
T 2y78_A 103 IPPQLGYGARGAGGVIPPNATLVFEVELLDV 133 (133)
T ss_dssp ECGGGTTTTTCBTTTBCTTCCEEEEEEEEEC
T ss_pred ECcHHhCCCCCCCCCCCCCCeEEEEEEEEEC
Confidence 9999999999988789999999999999864
No 19
>2lkn_A AH receptor-interacting protein; FKBP-type domain, immunophilin homolog, protein binding; NMR {Homo sapiens}
Probab=99.89 E-value=1.8e-23 Score=182.49 Aligned_cols=117 Identities=25% Similarity=0.417 Sum_probs=99.5
Q ss_pred eecCCCeEEEEEEcccCcCCC--CCCCEEEEEEEEEec--CCCEEeecCCCCCcEEEEcCCCcccHhHHHHhccCcCccE
Q 011164 33 EIGNQGLKKKLVKEGEGWDTP--ENGDEVEVHYTGTLL--DGTQFDSSRDRSTPFKFTLGQGNVIKGWDIGIKTMKKGEN 108 (492)
Q Consensus 33 ~~~~~g~~~~il~~G~G~~~~--~~gd~V~v~Y~~~~~--dg~~~~ss~~~~~p~~f~lg~~~~~~gle~~l~~m~~Ge~ 108 (492)
.++++||+|+++++|+| ..| .+||.|.|||++++. ||++||||+++++|+.|.+|.+++|+||+++|.+|++||+
T Consensus 6 ~~~~~Gv~~~vl~~G~G-~~p~~~~G~~V~vhY~g~l~d~~G~~FDsS~~rg~P~~f~lG~g~vI~Gwd~gl~~M~~Ge~ 84 (165)
T 2lkn_A 6 RLREDGIQKRVIQEGRG-ELPDFQDGTKATFHYRTLHSDDEGTVLDDSRARGKPMELIIGKKFKLPVWETIVCTMREGEI 84 (165)
T ss_dssp HHHTTSCCCCEEECCSS-CCCCCCTTCEEEEECEEECSSSSCCEEEESTTTTCCEEEESSSSCSCSHHHHHHTTCCTTCE
T ss_pred cccCCCeEEEEEECCcC-CCCCCCCCCEEEEEEEEEEeCCCccEEEecccCCCCEEEEecCCCccHHHHHHHhcCccCce
Confidence 35789999999999999 544 589999999999986 4999999999999999999999999999999999999999
Q ss_pred EEEEecCCcccCCC--------CCCCC-----------------------------CCCCCceEEEEEEEEEeeccccc
Q 011164 109 AVFTIPPELAYGES--------GSPPT-----------------------------IPPNATLQFDVELLSWTSVKDIC 150 (492)
Q Consensus 109 ~~~~i~~~~ayg~~--------~~~~~-----------------------------i~~~~~l~~~vel~~~~~~~~~~ 150 (492)
++|+|||++|||.. ..... ++.+++|+|+|||+++..+....
T Consensus 85 ~~~~ipp~laYG~p~v~~~~r~~~~~~~p~~~~~~~~g~~~~~~~~~~g~~d~~~li~~p~~L~FeIELl~Ve~P~eye 163 (165)
T 2lkn_A 85 AQFLCDIKHVVLYPLVAKSLRNIAVGKDPLEGQRHCCGVAQMREHSSLGHADLDALQQNPQPLIFHMEMLKVESPGTYQ 163 (165)
T ss_dssp EEEECCHHHHSSHHHHHHHHTTGGGSSTTTTTCSCCSSCCSCCCCCCCCCSTTTHHHHSCCCCEEEEEEEEEECTTTCC
T ss_pred EEEEECHHHhcCCcchhhhhhhccccCCCccccccceeeeeccccccccccccccccCCCCCeEEEEEEEEEcCCcccc
Confidence 99999999999921 00011 23347799999999998766543
No 20
>2f4e_A ATFKBP42; FKBP-like, alpha-beta, signaling protein; 2.32A {Arabidopsis thaliana}
Probab=99.89 E-value=1.6e-22 Score=181.02 Aligned_cols=125 Identities=30% Similarity=0.574 Sum_probs=112.5
Q ss_pred CccccccceeeecCCCeEEEEEEcccCcCCCCCCCEEEEEEEEEec-CCCEEeecCCCCCcEEEEcCCC-cccHhHHHHh
Q 011164 23 APMMKVGEEKEIGNQGLKKKLVKEGEGWDTPENGDEVEVHYTGTLL-DGTQFDSSRDRSTPFKFTLGQG-NVIKGWDIGI 100 (492)
Q Consensus 23 ~~~~~~~~~~~~~~~g~~~~il~~G~G~~~~~~gd~V~v~Y~~~~~-dg~~~~ss~~~~~p~~f~lg~~-~~~~gle~~l 100 (492)
....+.+.....+++|++|+++++|+| ..|..||.|.|||++++. +|++|++|+.++.|+.|.+|.+ ++++||+++|
T Consensus 35 ~~p~~~~~~~~~~~~gl~~~vl~~G~G-~~~~~Gd~V~v~Y~g~l~~dG~~fdss~~~~~p~~f~lG~g~~vi~G~eeaL 113 (180)
T 2f4e_A 35 NVPPKVDSEAEVLDEKVSKQIIKEGHG-SKPSKYSTCFLHYRAWTKNSQHKFEDTWHEQQPIELVLGKEKKELAGLAIGV 113 (180)
T ss_dssp CSCCCCCSCCEEEETTEEEEEEECCBS-CCBCTTCEEEEEEEEEETTTCCEEEETTTTTCCEEEETTSCCGGGHHHHHHH
T ss_pred cCCcccCCCcEECCCceEEEEEeCCCC-CCCCCCCEEEEEEEEEECCCCcEEeccCccCCCEEEEeCCCCchhHHHHHHH
Confidence 333455666677899999999999999 689999999999999998 6999999988789999999999 9999999999
Q ss_pred ccCcCccEEEEEecCCcccCCCCC--CCCCCCCCceEEEEEEEEEeeccc
Q 011164 101 KTMKKGENAVFTIPPELAYGESGS--PPTIPPNATLQFDVELLSWTSVKD 148 (492)
Q Consensus 101 ~~m~~Ge~~~~~i~~~~ayg~~~~--~~~i~~~~~l~~~vel~~~~~~~~ 148 (492)
.+|++|++++|.|||+++||..+. ++.||++++++|+|+|+++..+..
T Consensus 114 ~gMk~Ge~~~v~iPp~~aYG~~g~~~~~~Ip~~s~l~F~VeL~~v~~~~e 163 (180)
T 2f4e_A 114 ASMKSGERALVHVGWELAYGKEGNFSFPNVPPMADLLYEVEVIGFDETKE 163 (180)
T ss_dssp TTCCBTCEEEEEECGGGTTTTTCBSSSSCBCTTCCEEEEEEEEEESCBCC
T ss_pred hCCCCCCEEEEEECchHhCCcCCcccCCCcCCCCeEEEEEEEEEEecCcc
Confidence 999999999999999999999986 357999999999999999976443
No 21
>1kt0_A FKBP51, 51 kDa FK506-binding protein; FKBP-like ppiase, TPR repeats, isomerase; 2.70A {Homo sapiens} SCOP: a.118.8.1 d.26.1.1 d.26.1.1 PDB: 1kt1_A 3o5d_A
Probab=99.89 E-value=3.8e-24 Score=221.84 Aligned_cols=115 Identities=38% Similarity=0.609 Sum_probs=83.8
Q ss_pred eeee--CCccEEEEEEecCCCCCCCCCCCEEEEEEEEEEcCCcEEEEcCCCCCcccEEEEcCCcccchhHHHHHhccCcC
Q 011164 264 SEIT--DDKKVIKKILKEGDGFERPNEGAVVKVKLIGKLQDGTVFVKKGHSEEEQLFEFKTDEEQVIDGLDRAVITMKKN 341 (492)
Q Consensus 264 ~d~~--~d~~v~k~il~~G~g~~~p~~g~~V~v~y~~~~~~g~~~d~~~~~~~~~~~~~~lg~~~~~~gle~~l~~m~~G 341 (492)
.|++ .++++.++++++|+|...|..||.|+|||++++.||++||+++ ....|+.|.+|.+++++||+.+|.+|++|
T Consensus 23 ~~~~~~~~~g~~~~~~~~G~g~~~~~~gd~v~v~y~~~~~~g~~~dss~--~~~~p~~~~~g~~~~i~g~~~~l~~m~~G 100 (457)
T 1kt0_A 23 EDITSKKDRGVLKIVKRVGNGEETPMIGDKVYVHYKGKLSNGKKFDSSH--DRNEPFVFSLGKGQVIKAWDIGVATMKRG 100 (457)
T ss_dssp ----------CEEEC--------CCCBTCEEEEEEEEEC-----CBC--------CEEEETTSTTSCHHHHHHHTTCCTT
T ss_pred ccccCCCCCcEEEEEEECCCCCCCCCCCCEEEEEEEEEECCCCEEeccC--CCCCCeEEEeCCcchhhHHHHHHhhCCCC
Confidence 3555 6889999999999996569999999999999999999999886 35689999999999999999999999999
Q ss_pred cEEEEEECCCCccCCCccccccccCCCCccEEEEEEEeeeee
Q 011164 342 EVALLTIAPEYAFGSAESQQELAVVPPNSTVHYEVELVSFEK 383 (492)
Q Consensus 342 e~~~i~ip~~~~yg~~~~~~~~~~ip~~~~l~~~v~l~~~~~ 383 (492)
|++.|.|||+++||..|.+ +.||++++++|+|+|++|..
T Consensus 101 e~~~~~i~~~~~yg~~g~~---~~i~~~~~l~~~v~l~~~~~ 139 (457)
T 1kt0_A 101 EICHLLCKPEYAYGSAGSL---PKIPSNATLFFEIELLDFKG 139 (457)
T ss_dssp CEEEEEECGGGTTTTTCBT---TTBCTTCCEEEEEEEEEEEC
T ss_pred CEEEEEEChHHhccccCCC---CCCCCCCcEEEEEeeceeec
Confidence 9999999999999988865 57999999999999999875
No 22
>2lgo_A FKBP; infectious disease, isomerase, giardiasis, ssgcid, structura genomics, seattle structural genomics center for infectious; NMR {Giardia lamblia}
Probab=99.89 E-value=1.1e-22 Score=172.60 Aligned_cols=113 Identities=54% Similarity=0.963 Sum_probs=104.4
Q ss_pred eeeecCCCeEEE--EEEcccCcCCCCCCCEEEEEEEEEecCCCEEeecCCCCCcEEEEcCCCcccHhHHHHhccCcCccE
Q 011164 31 EKEIGNQGLKKK--LVKEGEGWDTPENGDEVEVHYTGTLLDGTQFDSSRDRSTPFKFTLGQGNVIKGWDIGIKTMKKGEN 108 (492)
Q Consensus 31 ~~~~~~~g~~~~--il~~G~G~~~~~~gd~V~v~Y~~~~~dg~~~~ss~~~~~p~~f~lg~~~~~~gle~~l~~m~~Ge~ 108 (492)
....+++|++++ ++++|+|...++.||.|.++|++++.||++|++++.++.|+.|.+|.+++++||+++|.+|++||+
T Consensus 16 ~~~~~~~Gl~~~K~~l~~G~G~~~~~~gd~V~v~Y~g~~~dG~~fdss~~~~~p~~f~lG~g~vi~G~e~aL~gm~~Ge~ 95 (130)
T 2lgo_A 16 TQGPGSMSAQLEKKVLTPGDGVTKPQAGKKVTVHYDGRFPDGKQFDSSRSRGKPFQFTLGAGEVIKGWDQGVATMTLGEK 95 (130)
T ss_dssp SCSSSSSSCCCCEEEEECCCSSCCCCTTSEEEEEEEEECTTSCEEECTTTTTCCEEEETTSTTSCHHHHHHHHHSCTTEE
T ss_pred cceeCCCceEEEEEEEeccCCCccCCCCCEEEEEEEEEECCCCEEEccCcCCCCEEEEeCCCCccHHHHHHHhCCCCCCE
Confidence 335578999999 999999943399999999999999999999999988778999999999999999999999999999
Q ss_pred EEEEecCCcccCCCCCCCCCCCCCceEEEEEEEEE
Q 011164 109 AVFTIPPELAYGESGSPPTIPPNATLQFDVELLSW 143 (492)
Q Consensus 109 ~~~~i~~~~ayg~~~~~~~i~~~~~l~~~vel~~~ 143 (492)
++|.|||+++||+.+.++.||++++++|+|+|+++
T Consensus 96 ~~v~ip~~~aYG~~~~~~~Ip~~~~l~f~VeL~~i 130 (130)
T 2lgo_A 96 ALFTIPYQLAYGERGYPPVIPPKATLVFEVELLAV 130 (130)
T ss_dssp EEEEECTTTSTTTTCCSTTSCSSCCEEEEEEEEEC
T ss_pred EEEEECcHHHCCCCCCCCCcCCCCeEEEEEEEEEC
Confidence 99999999999999988789999999999999874
No 23
>4dip_A Peptidyl-prolyl CIS-trans isomerase FKBP14; structural genomics, structural genomics consortium, SGC, PE prolyl CIS-trans isomerase; 1.82A {Homo sapiens}
Probab=99.88 E-value=3.7e-22 Score=168.73 Aligned_cols=111 Identities=38% Similarity=0.668 Sum_probs=103.8
Q ss_pred eecCCCeEEEEEEccc--CcCCCCCCCEEEEEEEEEec-CCCEEeecCC--CCCcEEEEcCCCcccHhHHHHhccCcCcc
Q 011164 33 EIGNQGLKKKLVKEGE--GWDTPENGDEVEVHYTGTLL-DGTQFDSSRD--RSTPFKFTLGQGNVIKGWDIGIKTMKKGE 107 (492)
Q Consensus 33 ~~~~~g~~~~il~~G~--G~~~~~~gd~V~v~Y~~~~~-dg~~~~ss~~--~~~p~~f~lg~~~~~~gle~~l~~m~~Ge 107 (492)
.++++|++|+++++|+ | ..++.||.|.|||++++. ||++|++|+. .+.|+.|.+|.+++++||+++|.+|++|+
T Consensus 8 ~~~~~gl~~~~l~~g~~~g-~~~~~gd~V~v~Y~g~~~~dG~~fdss~~~~~~~p~~f~lG~~~~i~G~e~~l~gm~~Ge 86 (125)
T 4dip_A 8 LIPEPEVKIEVLQKPFICH-RKTKGGDLMLVHYEGYLEKDGSLFHSTHKHNNGQPIWFTLGILEALKGWDQGLKGMCVGE 86 (125)
T ss_dssp GCCCCCCEEEEEECCSCCS-CCCCTTCEEEEEEEEEETTTCCEEEEHHHHTTTCCEEEETTSCSSCHHHHHHSTTCCTTC
T ss_pred EECCCCeEEEEEEcCCCCC-CcCCCCCEEEEEEEEEECCCCcEEEEcccCCCCcCEEEEeCCCChhHHHHHHHhCCCCCC
Confidence 4688999999999998 5 889999999999999998 9999999973 45899999999999999999999999999
Q ss_pred EEEEEecCCcccCCCCCCCCCCCCCceEEEEEEEEEee
Q 011164 108 NAVFTIPPELAYGESGSPPTIPPNATLQFDVELLSWTS 145 (492)
Q Consensus 108 ~~~~~i~~~~ayg~~~~~~~i~~~~~l~~~vel~~~~~ 145 (492)
+++|.|||++|||+.+.+ .||++++++|+|+|+++..
T Consensus 87 ~~~~~ip~~~aYG~~g~~-~Ip~~~~l~f~vel~~i~~ 123 (125)
T 4dip_A 87 KRKLIIPPALGYGKEGKG-KIPPESTLIFNIDLLEIRN 123 (125)
T ss_dssp EEEEEECGGGTTTTTCBT-TBCTTCCEEEEEEEEEEEC
T ss_pred EEEEEEChHHhcCCCCCC-CCCCCCeEEEEEEEEEEEc
Confidence 999999999999999966 8999999999999999864
No 24
>1r9h_A FKB-6, FK506 binding protein family; structural genomics, peptidylprolyl isomerase, PSI, protein structure initiative; 1.80A {Caenorhabditis elegans} SCOP: d.26.1.1
Probab=99.88 E-value=3.1e-22 Score=171.10 Aligned_cols=117 Identities=39% Similarity=0.626 Sum_probs=105.8
Q ss_pred eeeee--CCccEEEEEEecCCCCCCCCCCCEEEEEEEEEEcCCcEEEEcCCCCCcccEEEEcCCcccchhHHHHHhccCc
Q 011164 263 VSEIT--DDKKVIKKILKEGDGFERPNEGAVVKVKLIGKLQDGTVFVKKGHSEEEQLFEFKTDEEQVIDGLDRAVITMKK 340 (492)
Q Consensus 263 ~~d~~--~d~~v~k~il~~G~g~~~p~~g~~V~v~y~~~~~~g~~~d~~~~~~~~~~~~~~lg~~~~~~gle~~l~~m~~ 340 (492)
+.|++ .+++++++++++|+|...|..||.|++||++++.||++||+++ ....|+.|.+|.+++++||+.+|.+|++
T Consensus 5 ~~dv~~~~~~gl~~~~l~~G~g~~~~~~gd~V~v~Y~g~~~dG~~fdss~--~~~~p~~f~lG~~~vi~G~e~~l~gm~~ 82 (135)
T 1r9h_A 5 KIDITPKKDGGVLKLIKKEGQGVVKPTTGTTVKVHYVGTLENGTKFDSSR--DRGDQFSFNLGRGNVIKGWDLGVATMTK 82 (135)
T ss_dssp CEECSTTCCSSEEEEEEECCBSSCCCCTTCEEEEEEEEEETTSCEEEEHH--HHTSCEEEETTTTSSCHHHHHHHTTCCB
T ss_pred ceecccCCCCcEEEEEEEccCCCcCCCCCCEEEEEEEEEECCCCEEEecC--cCCCCEEEEeCCCCccHHHHHHHhcCCC
Confidence 34666 7899999999999996579999999999999999999999885 2358999999999999999999999999
Q ss_pred CcEEEEEECCCCccCCCccccccccCCCCccEEEEEEEeeeeec
Q 011164 341 NEVALLTIAPEYAFGSAESQQELAVVPPNSTVHYEVELVSFEKE 384 (492)
Q Consensus 341 Ge~~~i~ip~~~~yg~~~~~~~~~~ip~~~~l~~~v~l~~~~~~ 384 (492)
||+++|.|||++|||..+.+ ..||++++|+|+|+|++|.+.
T Consensus 83 Ge~~~v~ip~~~aYG~~g~~---~~Ip~~~~l~f~v~l~~i~~~ 123 (135)
T 1r9h_A 83 GEVAEFTIRSDYGYGDAGSP---PKIPGGATLIFEVELFEWSAE 123 (135)
T ss_dssp TCEEEEEECGGGTTTTTCBT---TTBCTTCCEEEEEEEEEEEC-
T ss_pred CCEEEEEEChHHcCCCCCCC---CCcCcCCcEEEEEEEEEeecC
Confidence 99999999999999998764 579999999999999999854
No 25
>2vn1_A 70 kDa peptidylprolyl isomerase; FKBP, FK506, TPR repeat; HET: FK5; 2.35A {Plasmodium falciparum} PDB: 2ofn_A 2ki3_A 3ihz_A* 3ni6_A 3pa7_A
Probab=99.88 E-value=6.2e-22 Score=168.20 Aligned_cols=112 Identities=46% Similarity=0.850 Sum_probs=101.0
Q ss_pred ecCC-CeEEEEEEcc-cC-cCCCCCCCEEEEEEEEEe-cCCCEEeecCCCCCcEEEEcCCCcccHhHHHHhccCcCccEE
Q 011164 34 IGNQ-GLKKKLVKEG-EG-WDTPENGDEVEVHYTGTL-LDGTQFDSSRDRSTPFKFTLGQGNVIKGWDIGIKTMKKGENA 109 (492)
Q Consensus 34 ~~~~-g~~~~il~~G-~G-~~~~~~gd~V~v~Y~~~~-~dg~~~~ss~~~~~p~~f~lg~~~~~~gle~~l~~m~~Ge~~ 109 (492)
++++ +++++++++| +| ...++.||.|.|||++++ .||++|++|+.++.|+.|.+|.+++++||+++|.+|++|+++
T Consensus 12 ~~~~g~~~~~il~~G~~g~g~~~~~gd~V~v~Y~g~~~~dG~~fd~s~~~~~p~~f~lG~g~~i~g~e~~l~gm~~Ge~~ 91 (129)
T 2vn1_A 12 LTADGGVIKTILKKGDEGEENIPKKGNEVTVHYVGKLESTGKVFDSSFDRNVPFKFHLEQGEVIKGWDICVSSMRKNEKC 91 (129)
T ss_dssp CSTTSSEEEEEEECCCCSGGGSCCTTCEEEEEEEEEETTTCCEEEEGGGTTCCEEEETTSSSSCHHHHHHHTTCCTTCEE
T ss_pred ECCCCCEEEEEEeCCCCCCCCcCCCCCEEEEEEEEEECCCCeEEEecCCCCccEEEEeCCCCcCHHHHHHHhCCCCCCEE
Confidence 3444 5566899976 44 278999999999999999 799999999877789999999999999999999999999999
Q ss_pred EEEecCCcccCCCCCCCCCCCCCceEEEEEEEEEee
Q 011164 110 VFTIPPELAYGESGSPPTIPPNATLQFDVELLSWTS 145 (492)
Q Consensus 110 ~~~i~~~~ayg~~~~~~~i~~~~~l~~~vel~~~~~ 145 (492)
+|.|||++|||+.+.++.||++++++|+|+|+++..
T Consensus 92 ~v~ip~~~aYG~~~~~~~Ip~~~~l~f~vel~~v~~ 127 (129)
T 2vn1_A 92 LVRIESMYGYGDEGCGESIPGNSVLLFEIELLSFRE 127 (129)
T ss_dssp EEEECGGGTTTTTCBTTTBCTTCCEEEEEEEEEEEC
T ss_pred EEEEChHHcCCCCCCCCCcCCCCeEEEEEEEEEEec
Confidence 999999999999998778999999999999999864
No 26
>4dip_A Peptidyl-prolyl CIS-trans isomerase FKBP14; structural genomics, structural genomics consortium, SGC, PE prolyl CIS-trans isomerase; 1.82A {Homo sapiens}
Probab=99.88 E-value=2.7e-22 Score=169.56 Aligned_cols=115 Identities=21% Similarity=0.377 Sum_probs=103.7
Q ss_pred eeeCCccEEEEEEecCC--CCCCCCCCCEEEEEEEEEEc-CCcEEEEcCCCCCcccEEEEcCCcccchhHHHHHhccCcC
Q 011164 265 EITDDKKVIKKILKEGD--GFERPNEGAVVKVKLIGKLQ-DGTVFVKKGHSEEEQLFEFKTDEEQVIDGLDRAVITMKKN 341 (492)
Q Consensus 265 d~~~d~~v~k~il~~G~--g~~~p~~g~~V~v~y~~~~~-~g~~~d~~~~~~~~~~~~~~lg~~~~~~gle~~l~~m~~G 341 (492)
....+.++.++++++|. | ..|..||.|+|||++++. ||++||+++......|+.|.+|.+++++||+.+|.+|++|
T Consensus 7 ~~~~~~gl~~~~l~~g~~~g-~~~~~gd~V~v~Y~g~~~~dG~~fdss~~~~~~~p~~f~lG~~~~i~G~e~~l~gm~~G 85 (125)
T 4dip_A 7 ALIPEPEVKIEVLQKPFICH-RKTKGGDLMLVHYEGYLEKDGSLFHSTHKHNNGQPIWFTLGILEALKGWDQGLKGMCVG 85 (125)
T ss_dssp GGCCCCCCEEEEEECCSCCS-CCCCTTCEEEEEEEEEETTTCCEEEEHHHHTTTCCEEEETTSCSSCHHHHHHSTTCCTT
T ss_pred eEECCCCeEEEEEEcCCCCC-CcCCCCCEEEEEEEEEECCCCcEEEEcccCCCCcCEEEEeCCCChhHHHHHHHhCCCCC
Confidence 34567899999999998 5 899999999999999998 9999999853224689999999999999999999999999
Q ss_pred cEEEEEECCCCccCCCccccccccCCCCccEEEEEEEeeeeec
Q 011164 342 EVALLTIAPEYAFGSAESQQELAVVPPNSTVHYEVELVSFEKE 384 (492)
Q Consensus 342 e~~~i~ip~~~~yg~~~~~~~~~~ip~~~~l~~~v~l~~~~~~ 384 (492)
|+++|.|||++|||..+.. .|||+++|+|+|+|+++.+.
T Consensus 86 e~~~~~ip~~~aYG~~g~~----~Ip~~~~l~f~vel~~i~~~ 124 (125)
T 4dip_A 86 EKRKLIIPPALGYGKEGKG----KIPPESTLIFNIDLLEIRNG 124 (125)
T ss_dssp CEEEEEECGGGTTTTTCBT----TBCTTCCEEEEEEEEEEECC
T ss_pred CEEEEEEChHHhcCCCCCC----CCCCCCeEEEEEEEEEEEcC
Confidence 9999999999999998753 69999999999999999864
No 27
>2lkn_A AH receptor-interacting protein; FKBP-type domain, immunophilin homolog, protein binding; NMR {Homo sapiens}
Probab=99.88 E-value=5.3e-23 Score=179.48 Aligned_cols=117 Identities=17% Similarity=0.229 Sum_probs=95.8
Q ss_pred eCCccEEEEEEecCCCCCCC--CCCCEEEEEEEEEEcC--CcEEEEcCCCCCcccEEEEcCCcccchhHHHHHhccCcCc
Q 011164 267 TDDKKVIKKILKEGDGFERP--NEGAVVKVKLIGKLQD--GTVFVKKGHSEEEQLFEFKTDEEQVIDGLDRAVITMKKNE 342 (492)
Q Consensus 267 ~~d~~v~k~il~~G~g~~~p--~~g~~V~v~y~~~~~~--g~~~d~~~~~~~~~~~~~~lg~~~~~~gle~~l~~m~~Ge 342 (492)
+.++||.|+++++|+| ..| ..|++|+|||++++.| |++||||+ ..++|++|.+|.+++|+||+.+|.+|++||
T Consensus 7 ~~~~Gv~~~vl~~G~G-~~p~~~~G~~V~vhY~g~l~d~~G~~FDsS~--~rg~P~~f~lG~g~vI~Gwd~gl~~M~~Ge 83 (165)
T 2lkn_A 7 LREDGIQKRVIQEGRG-ELPDFQDGTKATFHYRTLHSDDEGTVLDDSR--ARGKPMELIIGKKFKLPVWETIVCTMREGE 83 (165)
T ss_dssp HHTTSCCCCEEECCSS-CCCCCCTTCEEEEECEEECSSSSCCEEEEST--TTTCCEEEESSSSCSCSHHHHHHTTCCTTC
T ss_pred ccCCCeEEEEEECCcC-CCCCCCCCCEEEEEEEEEEeCCCccEEEecc--cCCCCEEEEecCCCccHHHHHHHhcCccCc
Confidence 3577899999999999 544 5799999999999965 99999997 467899999999999999999999999999
Q ss_pred EEEEEECCCCccCCC-------cccc---------------------------ccccCCCCccEEEEEEEeeeeeccc
Q 011164 343 VALLTIAPEYAFGSA-------ESQQ---------------------------ELAVVPPNSTVHYEVELVSFEKEKE 386 (492)
Q Consensus 343 ~~~i~ip~~~~yg~~-------~~~~---------------------------~~~~ip~~~~l~~~v~l~~~~~~~~ 386 (492)
+++|+|||++|||.. .... ....+++.++|+|+|||++|+...+
T Consensus 84 ~~~~~ipp~laYG~p~v~~~~r~~~~~~~p~~~~~~~~g~~~~~~~~~~g~~d~~~li~~p~~L~FeIELl~Ve~P~e 161 (165)
T 2lkn_A 84 IAQFLCDIKHVVLYPLVAKSLRNIAVGKDPLEGQRHCCGVAQMREHSSLGHADLDALQQNPQPLIFHMEMLKVESPGT 161 (165)
T ss_dssp EEEEECCHHHHSSHHHHHHHHTTGGGSSTTTTTCSCCSSCCSCCCCCCCCCSTTTHHHHSCCCCEEEEEEEEEECTTT
T ss_pred eEEEEECHHHhcCCcchhhhhhhccccCCCccccccceeeeeccccccccccccccccCCCCCeEEEEEEEEEcCCcc
Confidence 999999999999931 0000 0001334478999999999996543
No 28
>2if4_A ATFKBP42; FKBP-like, alpha-beta, TPR-like, alpha, signaling protein; 2.85A {Arabidopsis thaliana}
Probab=99.88 E-value=3.6e-22 Score=198.71 Aligned_cols=118 Identities=31% Similarity=0.616 Sum_probs=106.9
Q ss_pred cccceeeecCCCeEEEEEEcccCcCCCCCCCEEEEEEEEEecC-CCEEeecCCCCCcEEEEcCCC-cccHhHHHHhccCc
Q 011164 27 KVGEEKEIGNQGLKKKLVKEGEGWDTPENGDEVEVHYTGTLLD-GTQFDSSRDRSTPFKFTLGQG-NVIKGWDIGIKTMK 104 (492)
Q Consensus 27 ~~~~~~~~~~~g~~~~il~~G~G~~~~~~gd~V~v~Y~~~~~d-g~~~~ss~~~~~p~~f~lg~~-~~~~gle~~l~~m~ 104 (492)
++.....+.++|+.|+++++|+| ..|..||.|.|||++++.+ |++|++|+.++.|+.|.+|.+ ++++||+.+|.+|+
T Consensus 39 ~~~~~~~~~~~~~~~~~~~~g~g-~~~~~gd~v~v~y~g~~~~~g~~fd~~~~~~~~~~~~lg~~~~~i~g~e~~l~~m~ 117 (338)
T 2if4_A 39 KVDSEAEVLDEKVSKQIIKEGHG-SKPSKYSTCFLHYRAWTKNSQHKFEDTWHEQQPIELVLGKEKKELAGLAIGVASMK 117 (338)
T ss_dssp CCCSCCEEEETTEEEEEEECCBS-CCCCTTCEEEEEEEEEETTTCCCCEEHHHHTCCEEEETTSCCGGGHHHHHHHHHCC
T ss_pred CCCcCceeCCCCeEEEEEeCCCC-CCCCCCCEEEEEEEEEEcCCCcEeecccCCCCCeEEEcCCCCcccHHHHHHHhcCC
Confidence 45555667889999999999999 6899999999999999985 999999987678999999999 89999999999999
Q ss_pred CccEEEEEecCCcccCCCCC--CCCCCCCCceEEEEEEEEEee
Q 011164 105 KGENAVFTIPPELAYGESGS--PPTIPPNATLQFDVELLSWTS 145 (492)
Q Consensus 105 ~Ge~~~~~i~~~~ayg~~~~--~~~i~~~~~l~~~vel~~~~~ 145 (492)
+||+++|+|||.++||..+. .+.||++++++|.|+|+.+..
T Consensus 118 ~Ge~~~~~i~~~~~yg~~~~~~~~~ip~~~~l~f~v~L~~~~~ 160 (338)
T 2if4_A 118 SGERALVHVGWELAYGKEGNFSFPNVPPMADLLYEVEVIGFDE 160 (338)
T ss_dssp BTCEEEEEECGGGSSCSSCCCSSSCCCTTCCEEEEEEEEEEEC
T ss_pred CCCeEEEEECHHHhcCCCCCCCCCCCCCCCcEEEEEEEEEecC
Confidence 99999999999999999887 357999999999999988754
No 29
>3b7x_A FK506-binding protein 6; isomerase, repeat, rotamase, TPR repeat, williams-beuren syndrome, structural genomics consortium, SGC; 2.10A {Homo sapiens}
Probab=99.88 E-value=1.1e-22 Score=173.57 Aligned_cols=115 Identities=29% Similarity=0.507 Sum_probs=99.7
Q ss_pred ceeeeeCCccEEEEEEecCCCCCCCCCCCEEEEEEEEEEc-CCcEEEEcCCCCCcccEEEEcCCcccchhHHHHHhccCc
Q 011164 262 TVSEITDDKKVIKKILKEGDGFERPNEGAVVKVKLIGKLQ-DGTVFVKKGHSEEEQLFEFKTDEEQVIDGLDRAVITMKK 340 (492)
Q Consensus 262 ~~~d~~~d~~v~k~il~~G~g~~~p~~g~~V~v~y~~~~~-~g~~~d~~~~~~~~~~~~~~lg~~~~~~gle~~l~~m~~ 340 (492)
.+.+++.+++++++++++|.| ..+..||.|+|||++++. +|++||+++ ....|+.|.+|.+++++||+.+|.+|++
T Consensus 18 ~~~~v~~~~gl~~~vl~~G~g-~~~~~gd~V~v~Y~g~l~~~G~~fdss~--~~~~p~~f~lG~g~~i~G~e~aL~gm~~ 94 (134)
T 3b7x_A 18 RMLDISGDRGVLKDVIREGAG-DLVAPDASVLVKYSGYLEHMDRPFDSNY--FRKTPRLMKLGEDITLWGMELGLLSMRR 94 (134)
T ss_dssp TCEESSSSSSEEEEEEECCEE-EECCTTCEEEEEEEEECTTCSSCSEEC---------CEEC-CCCCCHHHHHHHHTCEE
T ss_pred ccceeeCCCCEEEEEEEcCCC-CCCCCCCEEEEEEEEEECCCCeEEEecC--CCCCCEEEEcCCcchhHHHHHHHhCCCC
Confidence 467888999999999999999 778899999999999998 699999885 2467999999999999999999999999
Q ss_pred CcEEEEEECCCCccCCCccccccccCCCCccEEEEEEEeeee
Q 011164 341 NEVALLTIAPEYAFGSAESQQELAVVPPNSTVHYEVELVSFE 382 (492)
Q Consensus 341 Ge~~~i~ip~~~~yg~~~~~~~~~~ip~~~~l~~~v~l~~~~ 382 (492)
||+++|.|||++|||..+.+ +.|||+++|+|+|+|+++.
T Consensus 95 Ge~~~v~ip~~~aYG~~~~~---~~Ip~~~~l~f~VeL~~i~ 133 (134)
T 3b7x_A 95 GELARFLFKPNYAYGTLGCP---PLIPPNTTVLFEIELLDFL 133 (134)
T ss_dssp TCEEEEEECGGGTTTTTCBT---TTBCTTCCEEEEEEEEEEC
T ss_pred CCEEEEEECHHHCcCCCCCC---CCcCcCCeEEEEEEEEEEe
Confidence 99999999999999998765 4699999999999999986
No 30
>1yat_A FK506 binding protein; HET: FK5; 2.50A {Saccharomyces cerevisiae} SCOP: d.26.1.1
Probab=99.88 E-value=8.3e-22 Score=163.50 Aligned_cols=109 Identities=30% Similarity=0.498 Sum_probs=99.2
Q ss_pred CccEEEEEEecCCCCCCCCCCCEEEEEEEEEEcCCcEEEEcCCCCCcccEEEEcCCcccchhHHHHHhccCcCcEEEEEE
Q 011164 269 DKKVIKKILKEGDGFERPNEGAVVKVKLIGKLQDGTVFVKKGHSEEEQLFEFKTDEEQVIDGLDRAVITMKKNEVALLTI 348 (492)
Q Consensus 269 d~~v~k~il~~G~g~~~p~~g~~V~v~y~~~~~~g~~~d~~~~~~~~~~~~~~lg~~~~~~gle~~l~~m~~Ge~~~i~i 348 (492)
+.++.++++++|+|...|..||.|++||++++.||++|++++. ...|+.|.+|.+++++||+.+|.+|++||+++|.|
T Consensus 5 ~~g~~~~~~~~G~g~~~~~~gd~V~v~y~~~~~dG~~~d~s~~--~~~p~~f~lG~~~~i~g~e~~l~gm~~Ge~~~v~i 82 (113)
T 1yat_A 5 EGNVKIDRISPGDGATFPKTGDLVTIHYTGTLENGQKFDSSVD--RGSPFQCNIGVGQVIKGWDVGIPKLSVGEKARLTI 82 (113)
T ss_dssp GGGCEEEEEECCCSSCCCCTTCEEEEEEEEEETTSCEEEESTT--TTCCEEEETTSSSSCHHHHHHGGGCCTTCEEEEEE
T ss_pred CCCeEEEEEECCCCcccCCCCCEEEEEEEEEECCCCEEEecCC--CCCcEEEEeCCCCccHHHHHHHhCCCCCCEEEEEE
Confidence 5679999999999944499999999999999999999999852 45799999999999999999999999999999999
Q ss_pred CCCCccCCCccccccccCCCCccEEEEEEEeeee
Q 011164 349 APEYAFGSAESQQELAVVPPNSTVHYEVELVSFE 382 (492)
Q Consensus 349 p~~~~yg~~~~~~~~~~ip~~~~l~~~v~l~~~~ 382 (492)
||++|||..+.+ +.|||+++|+|+|+|+++.
T Consensus 83 p~~~ayG~~~~~---~~Ip~~~~l~f~vel~~ik 113 (113)
T 1yat_A 83 PGPYAYGPRGFP---GLIPPNSTLVFDVELLKVN 113 (113)
T ss_dssp CGGGTTTTTCBT---TTBCTTCCEEEEEEEEEEC
T ss_pred CHHHCcCCCCCC---CCcCCCCeEEEEEEEEEeC
Confidence 999999988764 4699999999999999873
No 31
>2ppn_A FK506-binding protein 1A; high resolution protein structure, isomerase; 0.92A {Homo sapiens} SCOP: d.26.1.1 PDB: 1b6c_A 1a7x_A 1d7h_A 1d7i_A 1d7j_A* 1f40_A* 1fap_A* 1d6o_A* 1fkd_A* 1fkf_A* 1fkg_A* 1fkh_A* 1fki_A* 1fkj_A* 1fkr_A 1fks_A 1fkt_A 1j4h_A* 1j4i_A* 1j4r_A* ...
Probab=99.88 E-value=5.7e-22 Score=162.88 Aligned_cols=107 Identities=32% Similarity=0.597 Sum_probs=97.5
Q ss_pred cEEEEEEecCCCCCCCCCCCEEEEEEEEEEcCCcEEEEcCCCCCcccEEEEcCCcccchhHHHHHhccCcCcEEEEEECC
Q 011164 271 KVIKKILKEGDGFERPNEGAVVKVKLIGKLQDGTVFVKKGHSEEEQLFEFKTDEEQVIDGLDRAVITMKKNEVALLTIAP 350 (492)
Q Consensus 271 ~v~k~il~~G~g~~~p~~g~~V~v~y~~~~~~g~~~d~~~~~~~~~~~~~~lg~~~~~~gle~~l~~m~~Ge~~~i~ip~ 350 (492)
++.++++++|+|...|..||.|++||++++.||++|++++. ..+|+.|.+|.+++++||+.+|.+|++||+++|.+||
T Consensus 1 Gl~~~~~~~G~g~~~~~~gd~V~v~y~~~~~dG~~~d~s~~--~~~p~~f~lG~~~~i~g~~~~l~gm~~Ge~~~~~ip~ 78 (107)
T 2ppn_A 1 GVQVETISPGDGRTFPKRGQTCVVHYTGMLEDGKKFDSSRD--RNKPFKFMLGKQEVIRGWEEGVAQMSVGQRAKLTISP 78 (107)
T ss_dssp CEEEEEEECCCSSCCCCTTCEEEEEEEEEETTSCEEEEHHH--HTSCEEEETTSCCSCHHHHHHHTTCCTTCEEEEEECG
T ss_pred CcEEEEEECcCCCcCCCCCCEEEEEEEEEECCCCEEEecCC--CCCCEEEEeCCCChHHHHHHHHhCCCCCCEEEEEECH
Confidence 58899999999954599999999999999999999998852 3479999999999999999999999999999999999
Q ss_pred CCccCCCccccccccCCCCccEEEEEEEeeee
Q 011164 351 EYAFGSAESQQELAVVPPNSTVHYEVELVSFE 382 (492)
Q Consensus 351 ~~~yg~~~~~~~~~~ip~~~~l~~~v~l~~~~ 382 (492)
++|||..+.+ +.|||+++|+|+|+|++++
T Consensus 79 ~~ayG~~~~~---~~Ip~~~~l~f~v~l~~v~ 107 (107)
T 2ppn_A 79 DYAYGATGHP---GIIPPHATLVFDVELLKLE 107 (107)
T ss_dssp GGTTTTTCBT---TTBCTTCCEEEEEEEEEEC
T ss_pred HHccCCCCCC---CCcCCCCeEEEEEEEEEeC
Confidence 9999988764 4699999999999999874
No 32
>1jvw_A Macrophage infectivity potentiator; chagas disease, X-RAY rotamase, isomeras; 1.70A {Trypanosoma cruzi} SCOP: d.26.1.1
Probab=99.87 E-value=3.6e-22 Score=175.91 Aligned_cols=111 Identities=43% Similarity=0.712 Sum_probs=104.4
Q ss_pred eeecCCCeEEEEEEcccCcCC-CCCCCEEEEEEEEEecCCCEEeecCCCCCcEEEEcCCCcccHhHHHHhccCcCccEEE
Q 011164 32 KEIGNQGLKKKLVKEGEGWDT-PENGDEVEVHYTGTLLDGTQFDSSRDRSTPFKFTLGQGNVIKGWDIGIKTMKKGENAV 110 (492)
Q Consensus 32 ~~~~~~g~~~~il~~G~G~~~-~~~gd~V~v~Y~~~~~dg~~~~ss~~~~~p~~f~lg~~~~~~gle~~l~~m~~Ge~~~ 110 (492)
...+++|++|+++++|+| .. |..||.|.|||++++.||++|++|+.++.|+.|.+| ++++||+++|.+|++|++++
T Consensus 32 ~~~~~sGl~~~vl~~G~G-~~~~~~gd~V~v~Y~g~l~dG~~fdss~~~g~p~~f~lg--~vI~G~eeaL~gMk~Ge~~~ 108 (167)
T 1jvw_A 32 AVKLPSGLVFQRIARGSG-KRAPAIDDKCEVHYTGRLRDGTVFDSSRERGKPTTFRPN--EVIKGWTEALQLMREGDRWR 108 (167)
T ss_dssp EEECTTSCEEEEEECCCC-SBCCCTTCCEEEEEEEECTTSCEEEEHHHHTSCEEECGG--GSCHHHHHHHTTCCTTCEEE
T ss_pred cEECCCCEEEEEEEcCCC-CcCCCCCCEEEEEEEEEECCCCEEeeccccCCCEEEEeC--chhHHHHHHHcCCCCCCEEE
Confidence 356899999999999999 66 999999999999999999999999876789999995 89999999999999999999
Q ss_pred EEecCCcccCCCCCCCCCCCCCceEEEEEEEEEee
Q 011164 111 FTIPPELAYGESGSPPTIPPNATLQFDVELLSWTS 145 (492)
Q Consensus 111 ~~i~~~~ayg~~~~~~~i~~~~~l~~~vel~~~~~ 145 (492)
|.|||++|||+.+.++.||+|++++|+|+|+++..
T Consensus 109 ~~Ip~~laYG~~g~~~~Ipp~s~LiF~VeL~~i~~ 143 (167)
T 1jvw_A 109 LFIPYDLAYGVTGGGGMIPPYSPLEFDVELISIKD 143 (167)
T ss_dssp EEECGGGTTTTTCSSSSSCTTCCEEEEEEEEEEGG
T ss_pred EEECchhhCCCCCCCCCcCCCCeEEEEEEEEEEEc
Confidence 99999999999998888999999999999999975
No 33
>3uf8_A Ubiquitin-like protein SMT3, peptidyl-prolyl CIS- isomerase; ssgcid, seattle structural genomics center for in disease; HET: FK5; 1.50A {Burkholderia pseudomallei} PDB: 4ggq_C* 3vaw_A* 3uqa_A* 4g50_A* 4fn2_A* 3uqb_A* 4giv_A* 1euv_B 3v60_A 3v61_A 3v62_A*
Probab=99.87 E-value=8.6e-22 Score=180.51 Aligned_cols=110 Identities=53% Similarity=0.887 Sum_probs=105.0
Q ss_pred eecCCCeEEEEEEcccCcCCCCCCCEEEEEEEEEecCCCEEeecCCCCCcEEEEcCCCcccHhHHHHhccCcCccEEEEE
Q 011164 33 EIGNQGLKKKLVKEGEGWDTPENGDEVEVHYTGTLLDGTQFDSSRDRSTPFKFTLGQGNVIKGWDIGIKTMKKGENAVFT 112 (492)
Q Consensus 33 ~~~~~g~~~~il~~G~G~~~~~~gd~V~v~Y~~~~~dg~~~~ss~~~~~p~~f~lg~~~~~~gle~~l~~m~~Ge~~~~~ 112 (492)
..+++|++|+++++|+| ..|..||.|.+||++++.||++|++|+.++.|+.|.+|.+++++||+++|.+|++||+++|.
T Consensus 100 ~~~~sGl~~~vl~~G~G-~~~~~gd~V~v~Y~g~l~dG~~fdss~~~~~P~~f~lG~g~vi~G~eeaL~gM~~Ge~~~v~ 178 (209)
T 3uf8_A 100 VTTESGLKYEDLTEGSG-AEARAGQTVSVHYTGWLTDGQKFDSSKDRNDPFAFVLGGGMVIKGWDEGVQGMKVGGVRRLT 178 (209)
T ss_dssp EECTTSCEEEEEECCCS-CBCCTTCEEEEEEEEEETTSCEEEESGGGTCCEEEETTSSSSCHHHHHHHTTCBTTCEEEEE
T ss_pred cCCCCceEEEEEEcCCC-CcCCCCCEEEEEEEEEECCCCEEEEccccCCCEEEEeCCCccchhHHHHHhCCCCCCEEEEE
Confidence 56889999999999999 77999999999999999999999999887899999999999999999999999999999999
Q ss_pred ecCCcccCCCCCCCCCCCCCceEEEEEEEEE
Q 011164 113 IPPELAYGESGSPPTIPPNATLQFDVELLSW 143 (492)
Q Consensus 113 i~~~~ayg~~~~~~~i~~~~~l~~~vel~~~ 143 (492)
|||++|||+.+.++.||++++|+|+|+|+++
T Consensus 179 Ipp~~aYG~~g~~~~IP~~s~LvF~VeL~~I 209 (209)
T 3uf8_A 179 IPPQLGYGARGAAGVIPPNATLVFEVELLDV 209 (209)
T ss_dssp ECGGGTTTTTCBTTTBCTTCCEEEEEEEEEC
T ss_pred ECcHHhCCCCCCCCCcCCCCeEEEEEEEEEC
Confidence 9999999999988789999999999999874
No 34
>2awg_A 38 kDa FK-506 binding protein; FKBP-type, ppiase, BCL-2 inhibitor, SHH signalling antagonist, structural genomics consortium, SGC; 1.60A {Homo sapiens} PDB: 2f2d_A 3ey6_A
Probab=99.87 E-value=1.7e-21 Score=162.84 Aligned_cols=112 Identities=29% Similarity=0.403 Sum_probs=102.2
Q ss_pred ceeeeeCCccEEEEEEecCCCC-CCCCCCCEEEEEEEEEEcCCcEEEEcCCCCCcccEEEEcCCcccchhHHHHHhccCc
Q 011164 262 TVSEITDDKKVIKKILKEGDGF-ERPNEGAVVKVKLIGKLQDGTVFVKKGHSEEEQLFEFKTDEEQVIDGLDRAVITMKK 340 (492)
Q Consensus 262 ~~~d~~~d~~v~k~il~~G~g~-~~p~~g~~V~v~y~~~~~~g~~~d~~~~~~~~~~~~~~lg~~~~~~gle~~l~~m~~ 340 (492)
.+.++++++++.++++++|+|. ..|..||.|++||++++.||++|+++ .|+.|.+|.+++++||+.+|.+|++
T Consensus 5 ~~~~~~~~g~~~~~vl~~G~G~~~~~~~gd~V~v~y~g~~~dG~~~ds~------~p~~f~lG~~~~i~g~e~~l~gm~~ 78 (118)
T 2awg_A 5 EWLDILGNGLLRKKTLVPGPPGSSRPVKGQVVTVHLQTSLENGTRVQEE------PELVFTLGDCDVIQALDLSVPLMDV 78 (118)
T ss_dssp CEEESSSSSSEEEEEEECCCTTCCCCCTTSEEEEEEEEECTTSCEEEEE------EEEEEETTSSCSCHHHHHHGGGSCT
T ss_pred cceEECCCCCEEEEEEEcCCCCCccCCCCCEEEEEEEEEECCCCEEECC------CCEEEEECCCChhHHHHHHHhCCCC
Confidence 3567788888999999999993 38999999999999999999999863 6899999999999999999999999
Q ss_pred CcEEEEEECCCCccCCCccccccccCCCCccEEEEEEEeeee
Q 011164 341 NEVALLTIAPEYAFGSAESQQELAVVPPNSTVHYEVELVSFE 382 (492)
Q Consensus 341 Ge~~~i~ip~~~~yg~~~~~~~~~~ip~~~~l~~~v~l~~~~ 382 (492)
||+++|.|||++|||..+.+ +.|||+++|+|+|+|+++.
T Consensus 79 Ge~~~~~ip~~~ayG~~~~~---~~Ip~~~~l~f~v~l~~v~ 117 (118)
T 2awg_A 79 GETAMVTADSKYCYGPQGRS---PYIPPHAALCLEVTLKTAV 117 (118)
T ss_dssp TCEEEEEECGGGTTTTTCBT---TTBCTTCCEEEEEEEEEEE
T ss_pred CCEEEEEEChHHccCCCCCC---CccCCCCeEEEEEEEEEec
Confidence 99999999999999988764 4699999999999999986
No 35
>3oe2_A Peptidyl-prolyl CIS-trans isomerase; FKBP, ppiase, FK506; HET: TAR SRT; 1.60A {Pseudomonas syringae PV} SCOP: d.26.1.0
Probab=99.87 E-value=9.1e-22 Score=179.74 Aligned_cols=106 Identities=34% Similarity=0.616 Sum_probs=101.1
Q ss_pred eecCCCeEEEEEEcccCcCCCCCCCEEEEEEEEEecCCCEEeecCCCCCcEEEEcCCCcccHhHHHHhccCcCccEEEEE
Q 011164 33 EIGNQGLKKKLVKEGEGWDTPENGDEVEVHYTGTLLDGTQFDSSRDRSTPFKFTLGQGNVIKGWDIGIKTMKKGENAVFT 112 (492)
Q Consensus 33 ~~~~~g~~~~il~~G~G~~~~~~gd~V~v~Y~~~~~dg~~~~ss~~~~~p~~f~lg~~~~~~gle~~l~~m~~Ge~~~~~ 112 (492)
..+++|++|+++++|+| ..|..||.|.|||++++.||++|++| +.|+.|.+| ++++||+++|.+|++|++++|+
T Consensus 113 ~~~~sGl~y~vl~~G~G-~~p~~gd~V~V~Y~g~l~dG~vfDss---~~P~~f~lG--~vI~G~eeaL~gMk~Gek~~v~ 186 (219)
T 3oe2_A 113 KELADGILMTELTPGTG-PKPDANGRVEVRYVGRLPDGKIFDQS---TQPQWFRLD--SVISGWTSALQNMPTGAKWRLV 186 (219)
T ss_dssp EECGGGCEEEEEECCCS-CCCCTTSEEEEEEEEECTTSCEEEEC---SSCEEEEGG--GSCHHHHHHHTTCCTTCEEEEE
T ss_pred EECCCCeEEEEEecCCC-ccCCCCCEEEEEEEEEECCCCEeecc---CCcEEEEec--chhHHHHHHHhCCCCCCEEEEE
Confidence 45899999999999999 78999999999999999999999999 589999998 8999999999999999999999
Q ss_pred ecCCcccCCCCCCCCCCCCCceEEEEEEEEEe
Q 011164 113 IPPELAYGESGSPPTIPPNATLQFDVELLSWT 144 (492)
Q Consensus 113 i~~~~ayg~~~~~~~i~~~~~l~~~vel~~~~ 144 (492)
|||++|||..+.++.||++++|+|+|+|++++
T Consensus 187 IPp~lAYG~~g~~~~IPpnstLvFeVeLl~Ik 218 (219)
T 3oe2_A 187 IPSDQAYGAEGAGDLIDPFTPLVFEIELIAVS 218 (219)
T ss_dssp ECGGGTTTTTCBTTTBCTTCCEEEEEEEEEEE
T ss_pred ECchhcCCCCCCCCCCCCCCeEEEEEEEEEEe
Confidence 99999999999887899999999999999985
No 36
>2vn1_A 70 kDa peptidylprolyl isomerase; FKBP, FK506, TPR repeat; HET: FK5; 2.35A {Plasmodium falciparum} PDB: 2ofn_A 2ki3_A 3ihz_A* 3ni6_A 3pa7_A
Probab=99.87 E-value=1.9e-21 Score=165.12 Aligned_cols=115 Identities=38% Similarity=0.639 Sum_probs=102.3
Q ss_pred eeeeCCccEEEEEEecC-CC-CCCCCCCCEEEEEEEEEE-cCCcEEEEcCCCCCcccEEEEcCCcccchhHHHHHhccCc
Q 011164 264 SEITDDKKVIKKILKEG-DG-FERPNEGAVVKVKLIGKL-QDGTVFVKKGHSEEEQLFEFKTDEEQVIDGLDRAVITMKK 340 (492)
Q Consensus 264 ~d~~~d~~v~k~il~~G-~g-~~~p~~g~~V~v~y~~~~-~~g~~~d~~~~~~~~~~~~~~lg~~~~~~gle~~l~~m~~ 340 (492)
.+++.++.++++++++| .| ...|..||.|+|||++++ .||++||+++ ....|+.|.+|.+++++||+.+|.+|++
T Consensus 10 ~~~~~~g~~~~~il~~G~~g~g~~~~~gd~V~v~Y~g~~~~dG~~fd~s~--~~~~p~~f~lG~g~~i~g~e~~l~gm~~ 87 (129)
T 2vn1_A 10 VELTADGGVIKTILKKGDEGEENIPKKGNEVTVHYVGKLESTGKVFDSSF--DRNVPFKFHLEQGEVIKGWDICVSSMRK 87 (129)
T ss_dssp EECSTTSSEEEEEEECCCCSGGGSCCTTCEEEEEEEEEETTTCCEEEEGG--GTTCCEEEETTSSSSCHHHHHHHTTCCT
T ss_pred cEECCCCCEEEEEEeCCCCCCCCcCCCCCEEEEEEEEEECCCCeEEEecC--CCCccEEEEeCCCCcCHHHHHHHhCCCC
Confidence 34467788888999977 44 288999999999999999 7999999985 2468999999999999999999999999
Q ss_pred CcEEEEEECCCCccCCCccccccccCCCCccEEEEEEEeeeee
Q 011164 341 NEVALLTIAPEYAFGSAESQQELAVVPPNSTVHYEVELVSFEK 383 (492)
Q Consensus 341 Ge~~~i~ip~~~~yg~~~~~~~~~~ip~~~~l~~~v~l~~~~~ 383 (492)
||+++|.|||++|||..+.+ +.|||+++|+|+|+|+++.+
T Consensus 88 Ge~~~v~ip~~~aYG~~~~~---~~Ip~~~~l~f~vel~~v~~ 127 (129)
T 2vn1_A 88 NEKCLVRIESMYGYGDEGCG---ESIPGNSVLLFEIELLSFRE 127 (129)
T ss_dssp TCEEEEEECGGGTTTTTCBT---TTBCTTCCEEEEEEEEEEEC
T ss_pred CCEEEEEEChHHcCCCCCCC---CCcCCCCeEEEEEEEEEEec
Confidence 99999999999999988764 46999999999999999975
No 37
>1jvw_A Macrophage infectivity potentiator; chagas disease, X-RAY rotamase, isomeras; 1.70A {Trypanosoma cruzi} SCOP: d.26.1.1
Probab=99.87 E-value=1.4e-21 Score=172.17 Aligned_cols=121 Identities=27% Similarity=0.443 Sum_probs=106.2
Q ss_pred eCCccEEEEEEecCCCCCC-CCCCCEEEEEEEEEEcCCcEEEEcCCCCCcccEEEEcCCcccchhHHHHHhccCcCcEEE
Q 011164 267 TDDKKVIKKILKEGDGFER-PNEGAVVKVKLIGKLQDGTVFVKKGHSEEEQLFEFKTDEEQVIDGLDRAVITMKKNEVAL 345 (492)
Q Consensus 267 ~~d~~v~k~il~~G~g~~~-p~~g~~V~v~y~~~~~~g~~~d~~~~~~~~~~~~~~lg~~~~~~gle~~l~~m~~Ge~~~ 345 (492)
+.++|+.++++++|+| .. |..||.|+|||++++.||++||+++ ..+.|+.|.+ +++++||+.+|.+|++||+++
T Consensus 34 ~~~sGl~~~vl~~G~G-~~~~~~gd~V~v~Y~g~l~dG~~fdss~--~~g~p~~f~l--g~vI~G~eeaL~gMk~Ge~~~ 108 (167)
T 1jvw_A 34 KLPSGLVFQRIARGSG-KRAPAIDDKCEVHYTGRLRDGTVFDSSR--ERGKPTTFRP--NEVIKGWTEALQLMREGDRWR 108 (167)
T ss_dssp ECTTSCEEEEEECCCC-SBCCCTTCCEEEEEEEECTTSCEEEEHH--HHTSCEEECG--GGSCHHHHHHHTTCCTTCEEE
T ss_pred ECCCCEEEEEEEcCCC-CcCCCCCCEEEEEEEEEECCCCEEeecc--ccCCCEEEEe--CchhHHHHHHHcCCCCCCEEE
Confidence 4577899999999999 55 9999999999999999999999985 2457999999 489999999999999999999
Q ss_pred EEECCCCccCCCccccccccCCCCccEEEEEEEeeeeecccCCCCChHHHHH
Q 011164 346 LTIAPEYAFGSAESQQELAVVPPNSTVHYEVELVSFEKEKESWDMNTEEKIE 397 (492)
Q Consensus 346 i~ip~~~~yg~~~~~~~~~~ip~~~~l~~~v~l~~~~~~~~~~~~~~~e~l~ 397 (492)
|.|||++|||..+.+ +.||||++|+|+|+|+++.+. ++.++.+|.-+
T Consensus 109 ~~Ip~~laYG~~g~~---~~Ipp~s~LiF~VeL~~i~~~--~~~~~~~e~~~ 155 (167)
T 1jvw_A 109 LFIPYDLAYGVTGGG---GMIPPYSPLEFDVELISIKDG--GKGRTAEEVDE 155 (167)
T ss_dssp EEECGGGTTTTTCSS---SSSCTTCCEEEEEEEEEEGGG--CCSCBHHHHHH
T ss_pred EEECchhhCCCCCCC---CCcCCCCeEEEEEEEEEEEcC--CCCCCHHHHHH
Confidence 999999999998764 469999999999999999853 45677766443
No 38
>2y78_A Peptidyl-prolyl CIS-trans isomerase; MIP, ppiase, virulence; HET: SO4 GOL; 0.91A {Burkholderia pseudomallei} PDB: 2ke0_A 2ko7_A* 2l2s_A* 4dz2_A* 4dz3_A*
Probab=99.87 E-value=1.7e-21 Score=165.83 Aligned_cols=110 Identities=34% Similarity=0.541 Sum_probs=101.2
Q ss_pred eeCCccEEEEEEecCCCCCCCCCCCEEEEEEEEEEcCCcEEEEcCCCCCcccEEEEcCCcccchhHHHHHhccCcCcEEE
Q 011164 266 ITDDKKVIKKILKEGDGFERPNEGAVVKVKLIGKLQDGTVFVKKGHSEEEQLFEFKTDEEQVIDGLDRAVITMKKNEVAL 345 (492)
Q Consensus 266 ~~~d~~v~k~il~~G~g~~~p~~g~~V~v~y~~~~~~g~~~d~~~~~~~~~~~~~~lg~~~~~~gle~~l~~m~~Ge~~~ 345 (492)
...+.++.++++++|+| ..|..||.|+|||++++.||++||+++ ...+|+.|.+|.+++++||+.+|.+|++||+++
T Consensus 24 ~~~~~gl~~~~l~~G~G-~~~~~gd~V~v~Y~g~~~dG~~fdss~--~~~~p~~f~lG~g~vi~G~eeaL~gmk~Ge~~~ 100 (133)
T 2y78_A 24 VTTESGLKYEDLTEGSG-AEARAGQTVSVHYTGWLTDGQKFDSSK--DRNDPFAFVLGGGMVIKGWDEGVQGMKVGGVRR 100 (133)
T ss_dssp EECTTSCEEEEEECCSS-CBCCTTSEEEEEEEEEETTSCEEEETT--TTTCCEEEETTSSSSCHHHHHHSTTCBTTCEEE
T ss_pred EECCCCEEEEEEEcCCC-CCCCCCCEEEEEEEEEECCCCEEeccC--cCCCCEEEEeCCCChhHHHHHHHcCCCCCCEEE
Confidence 34578899999999999 899999999999999999999999986 246899999999999999999999999999999
Q ss_pred EEECCCCccCCCccccccccCCCCccEEEEEEEeee
Q 011164 346 LTIAPEYAFGSAESQQELAVVPPNSTVHYEVELVSF 381 (492)
Q Consensus 346 i~ip~~~~yg~~~~~~~~~~ip~~~~l~~~v~l~~~ 381 (492)
|.|||++|||..+.. ..|||+++|+|+|+|++|
T Consensus 101 v~ip~~~aYG~~~~~---~~Ipp~~~l~f~VeL~~I 133 (133)
T 2y78_A 101 LTIPPQLGYGARGAG---GVIPPNATLVFEVELLDV 133 (133)
T ss_dssp EEECGGGTTTTTCBT---TTBCTTCCEEEEEEEEEC
T ss_pred EEECcHHhCCCCCCC---CCCCCCCeEEEEEEEEEC
Confidence 999999999988764 469999999999999875
No 39
>1u79_A FKBP-type peptidyl-prolyl CIS-trans isomerase 3; TFKBP13, FK-506 binding protein; 1.85A {Arabidopsis thaliana} SCOP: d.26.1.1 PDB: 1y0o_A
Probab=99.87 E-value=4.3e-22 Score=169.04 Aligned_cols=111 Identities=41% Similarity=0.706 Sum_probs=103.2
Q ss_pred eeecCCCeEEEEEEcccCcCCCCCCCEEEEEEEEEecCCCEEeecCCCCCcEEEEcCCCcccHhHHHHhcc------CcC
Q 011164 32 KEIGNQGLKKKLVKEGEGWDTPENGDEVEVHYTGTLLDGTQFDSSRDRSTPFKFTLGQGNVIKGWDIGIKT------MKK 105 (492)
Q Consensus 32 ~~~~~~g~~~~il~~G~G~~~~~~gd~V~v~Y~~~~~dg~~~~ss~~~~~p~~f~lg~~~~~~gle~~l~~------m~~ 105 (492)
...+++|++|+++++|+| ..++.||.|.|||++++.||++|++|+.++.|+.|.+|.+++++||+++|.+ |++
T Consensus 7 ~~~~~~Gl~~~~l~~G~G-~~~~~gd~V~v~Y~g~~~dG~~fdss~~~~~p~~f~lG~~~~i~G~~~~L~G~~~~~~m~~ 85 (129)
T 1u79_A 7 FSVSPSGLAFCDKVVGYG-PEAVKGQLIKAHYVGKLENGKVFDSSYNRGKPLTFRIGVGEVIKGWDQGILGSDGIPPMLT 85 (129)
T ss_dssp CEECTTSCEEEEEECCSS-CBCCTTCEEEEEEEEECTTSCEEEEHHHHTSCEEEETTSSSSCHHHHHHHHCBTTBCCCBT
T ss_pred cEECCCCeEEEEEEcCCC-CCCCCCCEEEEEEEEEECCCCEEEecCCCCCCEEEEeCCCCccHHHHHHhcccccccccCC
Confidence 356889999999999999 7899999999999999999999999986568999999999999999999998 999
Q ss_pred ccEEEEEecCCcccCCCCCC-----CCCCCCCceEEEEEEEEE
Q 011164 106 GENAVFTIPPELAYGESGSP-----PTIPPNATLQFDVELLSW 143 (492)
Q Consensus 106 Ge~~~~~i~~~~ayg~~~~~-----~~i~~~~~l~~~vel~~~ 143 (492)
|++++|.|||+++||+.+.+ ..||++++++|+|+|+++
T Consensus 86 Ge~~~v~ip~~~aYG~~~~~~~~~~~~Ip~~~~l~f~vel~~i 128 (129)
T 1u79_A 86 GGKRTLRIPPELAYGDRGAGCKGGSCLIPPASVLLFDIEYIGK 128 (129)
T ss_dssp TCEEEEEECGGGTTGGGCEEEETTEEEECTTCCEEEEEEEEEE
T ss_pred CCEEEEEEChHHccCCCCCCccccCCcCCCCCeEEEEEEEEEe
Confidence 99999999999999998863 479999999999999886
No 40
>2jwx_A FKBP38NTD, FK506-binding protein 8 variant; apoptosis, beta barrel, central helix, with flexible N-terminal extension, isomerase; NMR {Homo sapiens}
Probab=99.87 E-value=3.2e-21 Score=167.92 Aligned_cols=110 Identities=34% Similarity=0.559 Sum_probs=101.0
Q ss_pred eecCCCe-EEEEEEcccCc-CCCCCCCEEEEEEEEEecCCCEEeecCCCCCcEEEEcCCCcccHhHHHHhccCcCccEEE
Q 011164 33 EIGNQGL-KKKLVKEGEGW-DTPENGDEVEVHYTGTLLDGTQFDSSRDRSTPFKFTLGQGNVIKGWDIGIKTMKKGENAV 110 (492)
Q Consensus 33 ~~~~~g~-~~~il~~G~G~-~~~~~gd~V~v~Y~~~~~dg~~~~ss~~~~~p~~f~lg~~~~~~gle~~l~~m~~Ge~~~ 110 (492)
.++++|+ +|+++++|+|. ..|..||.|.|||++++.||++|+++ .|+.|.+|.+++++||+++|.+|++|++++
T Consensus 38 ~~~~sG~v~~~vl~~G~G~~~~p~~gd~V~v~Y~g~l~dG~~fds~----~p~~f~lG~g~vi~G~eeaL~gMk~Ge~~~ 113 (157)
T 2jwx_A 38 DILGNGLLRKKTLVPGPPGSSRPVKGQVVTVHLQTSLENGTRVQEE----PELVFTLGDCDVIQALDLSVPLMDVGETAM 113 (157)
T ss_dssp ESSSSSSEEEEEEECCSTTSCCCCTTEEEEEEEEEECTTSCEEEEE----EEEEEETTTTSSCHHHHHHTTTSCTTCEEE
T ss_pred eECCCCCEEEEEEEccCCCccCCCCCCEEEEEEEEEECCCCEeecC----CCEEEEeCCCChhHHHHHHHcCCCCCCEEE
Confidence 3567776 89999999992 38999999999999999999999984 799999999999999999999999999999
Q ss_pred EEecCCcccCCCC-CCCCCCCCCceEEEEEEEEEeec
Q 011164 111 FTIPPELAYGESG-SPPTIPPNATLQFDVELLSWTSV 146 (492)
Q Consensus 111 ~~i~~~~ayg~~~-~~~~i~~~~~l~~~vel~~~~~~ 146 (492)
|.||++++||..+ .++.||++++++|+|+|+++...
T Consensus 114 v~IP~~~aYG~~g~~~~~IPp~stLiF~VeL~~i~~~ 150 (157)
T 2jwx_A 114 VTADSKYCYGPQGSRSPYIPPHAALCLEVTLKTAVDL 150 (157)
T ss_dssp EEECGGGTTTTTCCSSSCCCTTCCEEEEEEEEEEEEC
T ss_pred EEECchhcCCcccccCCCcCCCCeEEEEEEEEEEEcc
Confidence 9999999999999 66789999999999999998764
No 41
>1fd9_A Protein (macrophage infectivity potentiator prote; FKBP domain, long alpha helix, dimerisation VIA helical INTE isomerase; 2.41A {Legionella pneumophila} SCOP: d.26.1.1 PDB: 2uz5_A 2vcd_A*
Probab=99.87 E-value=1.4e-21 Score=178.66 Aligned_cols=110 Identities=36% Similarity=0.634 Sum_probs=104.0
Q ss_pred eecCCCeEEEEEEcccCcCCCCCCCEEEEEEEEEecCCCEEeecCCCCCcEEEEcCCCcccHhHHHHhccCcCccEEEEE
Q 011164 33 EIGNQGLKKKLVKEGEGWDTPENGDEVEVHYTGTLLDGTQFDSSRDRSTPFKFTLGQGNVIKGWDIGIKTMKKGENAVFT 112 (492)
Q Consensus 33 ~~~~~g~~~~il~~G~G~~~~~~gd~V~v~Y~~~~~dg~~~~ss~~~~~p~~f~lg~~~~~~gle~~l~~m~~Ge~~~~~ 112 (492)
..+++|++|+++++|+| ..|..||.|.|||++++.||++|++|+.++.|+.|.+| ++++||+++|.+|++|++++|+
T Consensus 102 ~~~~sGl~y~vl~~G~G-~~p~~gD~V~V~Y~g~l~dG~vfdss~~~g~p~~f~lg--~vI~G~eeaL~gMk~Gek~~v~ 178 (213)
T 1fd9_A 102 VVLPSGLQYKVINSGNG-VKPGKSDTVTVEYTGRLIDGTVFDSTEKTGKPATFQVS--QVIPGWTEALQLMPAGSTWEIY 178 (213)
T ss_dssp EECTTSCEEEEEECCCS-CCCCTTCEEEEEEEEEETTSCEEEEHHHHCSCEEEEGG--GSCHHHHHHHTTCCTTCEEEEE
T ss_pred EECCCccEEEEEecCCC-ccCCCCCEEEEEEEEEECCCCEEeeccccCCCEEEEcC--chhhHHHHHHcCCCCCCEEEEE
Confidence 56899999999999999 88999999999999999999999999877789999995 8999999999999999999999
Q ss_pred ecCCcccCCCCCCCCCCCCCceEEEEEEEEEee
Q 011164 113 IPPELAYGESGSPPTIPPNATLQFDVELLSWTS 145 (492)
Q Consensus 113 i~~~~ayg~~~~~~~i~~~~~l~~~vel~~~~~ 145 (492)
|||+++||+.+.++.||++++++|+|+|+++..
T Consensus 179 IP~~laYG~~g~~~~Ipp~stLiF~VeLl~v~~ 211 (213)
T 1fd9_A 179 VPSGLAYGPRSVGGPIGPNETLIFKIHLISVKK 211 (213)
T ss_dssp ECGGGTTTTCCCSSSCCTTCCEEEEEEEEEEEC
T ss_pred ECchhccCccCCCCCCCCCCeEEEEEEEEEEEc
Confidence 999999999998778999999999999999863
No 42
>2awg_A 38 kDa FK-506 binding protein; FKBP-type, ppiase, BCL-2 inhibitor, SHH signalling antagonist, structural genomics consortium, SGC; 1.60A {Homo sapiens} PDB: 2f2d_A 3ey6_A
Probab=99.87 E-value=3.3e-21 Score=161.03 Aligned_cols=107 Identities=35% Similarity=0.560 Sum_probs=98.7
Q ss_pred ecCCC-eEEEEEEcccCc-CCCCCCCEEEEEEEEEecCCCEEeecCCCCCcEEEEcCCCcccHhHHHHhccCcCccEEEE
Q 011164 34 IGNQG-LKKKLVKEGEGW-DTPENGDEVEVHYTGTLLDGTQFDSSRDRSTPFKFTLGQGNVIKGWDIGIKTMKKGENAVF 111 (492)
Q Consensus 34 ~~~~g-~~~~il~~G~G~-~~~~~gd~V~v~Y~~~~~dg~~~~ss~~~~~p~~f~lg~~~~~~gle~~l~~m~~Ge~~~~ 111 (492)
++++| ++|+++++|+|. ..|+.||.|.+||++++.||++|+++ .|+.|.+|.+++++||+++|.+|++|++++|
T Consensus 9 ~~~~g~~~~~vl~~G~G~~~~~~~gd~V~v~y~g~~~dG~~~ds~----~p~~f~lG~~~~i~g~e~~l~gm~~Ge~~~~ 84 (118)
T 2awg_A 9 ILGNGLLRKKTLVPGPPGSSRPVKGQVVTVHLQTSLENGTRVQEE----PELVFTLGDCDVIQALDLSVPLMDVGETAMV 84 (118)
T ss_dssp SSSSSSEEEEEEECCCTTCCCCCTTSEEEEEEEEECTTSCEEEEE----EEEEEETTSSCSCHHHHHHGGGSCTTCEEEE
T ss_pred ECCCCCEEEEEEEcCCCCCccCCCCCEEEEEEEEEECCCCEEECC----CCEEEEECCCChhHHHHHHHhCCCCCCEEEE
Confidence 34555 999999999993 27999999999999999999999984 7999999999999999999999999999999
Q ss_pred EecCCcccCCCCCCCCCCCCCceEEEEEEEEEe
Q 011164 112 TIPPELAYGESGSPPTIPPNATLQFDVELLSWT 144 (492)
Q Consensus 112 ~i~~~~ayg~~~~~~~i~~~~~l~~~vel~~~~ 144 (492)
.|||++|||..+.++.||++++++|+|+|+++.
T Consensus 85 ~ip~~~ayG~~~~~~~Ip~~~~l~f~v~l~~v~ 117 (118)
T 2awg_A 85 TADSKYCYGPQGRSPYIPPHAALCLEVTLKTAV 117 (118)
T ss_dssp EECGGGTTTTTCBTTTBCTTCCEEEEEEEEEEE
T ss_pred EEChHHccCCCCCCCccCCCCeEEEEEEEEEec
Confidence 999999999999877899999999999999874
No 43
>2jwx_A FKBP38NTD, FK506-binding protein 8 variant; apoptosis, beta barrel, central helix, with flexible N-terminal extension, isomerase; NMR {Homo sapiens}
Probab=99.86 E-value=2.3e-21 Score=168.83 Aligned_cols=115 Identities=28% Similarity=0.391 Sum_probs=102.9
Q ss_pred eeeeeCCccEEEEEEecCCCC-CCCCCCCEEEEEEEEEEcCCcEEEEcCCCCCcccEEEEcCCcccchhHHHHHhccCcC
Q 011164 263 VSEITDDKKVIKKILKEGDGF-ERPNEGAVVKVKLIGKLQDGTVFVKKGHSEEEQLFEFKTDEEQVIDGLDRAVITMKKN 341 (492)
Q Consensus 263 ~~d~~~d~~v~k~il~~G~g~-~~p~~g~~V~v~y~~~~~~g~~~d~~~~~~~~~~~~~~lg~~~~~~gle~~l~~m~~G 341 (492)
+.++++++.+.++++++|+|. ..|..||.|+|||++++.||++||++ .|+.|.+|.+++++||+.+|.+|++|
T Consensus 36 ~~~~~~sG~v~~~vl~~G~G~~~~p~~gd~V~v~Y~g~l~dG~~fds~------~p~~f~lG~g~vi~G~eeaL~gMk~G 109 (157)
T 2jwx_A 36 WLDILGNGLLRKKTLVPGPPGSSRPVKGQVVTVHLQTSLENGTRVQEE------PELVFTLGDCDVIQALDLSVPLMDVG 109 (157)
T ss_dssp CEESSSSSSEEEEEEECCSTTSCCCCTTEEEEEEEEEECTTSCEEEEE------EEEEEETTTTSSCHHHHHHTTTSCTT
T ss_pred cceECCCCCEEEEEEEccCCCccCCCCCCEEEEEEEEEECCCCEeecC------CCEEEEeCCCChhHHHHHHHcCCCCC
Confidence 455677777899999999992 38999999999999999999999863 68999999999999999999999999
Q ss_pred cEEEEEECCCCccCCCc-cccccccCCCCccEEEEEEEeeeeeccc
Q 011164 342 EVALLTIAPEYAFGSAE-SQQELAVVPPNSTVHYEVELVSFEKEKE 386 (492)
Q Consensus 342 e~~~i~ip~~~~yg~~~-~~~~~~~ip~~~~l~~~v~l~~~~~~~~ 386 (492)
|+++|.|||++|||..+ .. ..|||+++|+|+|+|+++.....
T Consensus 110 e~~~v~IP~~~aYG~~g~~~---~~IPp~stLiF~VeL~~i~~~~~ 152 (157)
T 2jwx_A 110 ETAMVTADSKYCYGPQGSRS---PYIPPHAALCLEVTLKTAVDLEH 152 (157)
T ss_dssp CEEEEEECGGGTTTTTCCSS---SCCCTTCCEEEEEEEEEEEECSC
T ss_pred CEEEEEECchhcCCcccccC---CCcCCCCeEEEEEEEEEEEcccc
Confidence 99999999999999887 43 46999999999999999986543
No 44
>2d9f_A FK506-binding protein 8 variant; FKBP, rapamycin, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=99.86 E-value=1.3e-21 Score=167.20 Aligned_cols=121 Identities=27% Similarity=0.360 Sum_probs=107.7
Q ss_pred eeeeeCCccEEEEEEecCCCC-CCCCCCCEEEEEEEEEEcCCcEEEEcCCCCCcccEEEEcCCcccchhHHHHHhccCcC
Q 011164 263 VSEITDDKKVIKKILKEGDGF-ERPNEGAVVKVKLIGKLQDGTVFVKKGHSEEEQLFEFKTDEEQVIDGLDRAVITMKKN 341 (492)
Q Consensus 263 ~~d~~~d~~v~k~il~~G~g~-~~p~~g~~V~v~y~~~~~~g~~~d~~~~~~~~~~~~~~lg~~~~~~gle~~l~~m~~G 341 (492)
+.++++++++.++++++|+|. ..|..||.|++||++++.||++|++ ..|+.|.+|.+++++||+.+|.+|++|
T Consensus 10 ~~~~~~~g~l~~~vl~~G~G~~~~~~~gd~V~v~Y~g~~~dG~~fds------~~p~~f~lG~g~~i~G~e~~L~gm~~G 83 (135)
T 2d9f_A 10 WLDILGNGLLRKKTLVPGPPGSSRPVKGQVVTVHLQTSLENGTRVQE------EPELVFTLGDCDVIQALDLSVPLMDVG 83 (135)
T ss_dssp CEESSSSSSSEEEEEECCCSSCCCCCTTSEEEEEEEEEESSSCEEEE------EEEEEEETTSCCSCTTTTTTGGGSCTT
T ss_pred CcEECCCCCEEEEEEEcCCCCCccCCCCCEEEEEEEEEECCCCEEec------CCCEEEEeCCCChhHHHHHHHhCCCCC
Confidence 467778888999999999993 3899999999999999999999985 368999999999999999999999999
Q ss_pred cEEEEEECCCCccCCCc-cccccccCCCCccEEEEEEEeeeeecccCCCCCh
Q 011164 342 EVALLTIAPEYAFGSAE-SQQELAVVPPNSTVHYEVELVSFEKEKESWDMNT 392 (492)
Q Consensus 342 e~~~i~ip~~~~yg~~~-~~~~~~~ip~~~~l~~~v~l~~~~~~~~~~~~~~ 392 (492)
|+++|.|||++|||..+ .. ..|||+++|+|+|+|+++.+..+...++.
T Consensus 84 e~~~v~ip~~~aYG~~~~~~---~~Ip~~~~l~f~vel~~v~~~~~~e~~s~ 132 (135)
T 2d9f_A 84 ETAMVTADSKYCYGPQGSRS---PYIPPHAALCLEVTLKTAVDRPDLEMSGP 132 (135)
T ss_dssp CEEEEEECHHHHTCTTCCSS---SCCCTTCCEEEEEEEEEEESSCSSSSCCC
T ss_pred CEEEEEEChhHccCcCCcCC---CccCCCCeEEEEEEEEEeecCCchhhcCc
Confidence 99999999999999887 43 46999999999999999998766655543
No 45
>2lgo_A FKBP; infectious disease, isomerase, giardiasis, ssgcid, structura genomics, seattle structural genomics center for infectious; NMR {Giardia lamblia}
Probab=99.85 E-value=3.8e-21 Score=163.02 Aligned_cols=108 Identities=33% Similarity=0.564 Sum_probs=96.7
Q ss_pred CccEEEE--EEecCCCCCCCCCCCEEEEEEEEEEcCCcEEEEcCCCCCcccEEEEcCCcccchhHHHHHhccCcCcEEEE
Q 011164 269 DKKVIKK--ILKEGDGFERPNEGAVVKVKLIGKLQDGTVFVKKGHSEEEQLFEFKTDEEQVIDGLDRAVITMKKNEVALL 346 (492)
Q Consensus 269 d~~v~k~--il~~G~g~~~p~~g~~V~v~y~~~~~~g~~~d~~~~~~~~~~~~~~lg~~~~~~gle~~l~~m~~Ge~~~i 346 (492)
+.++.++ ++++|+|...|..||.|++||++++.||++||+++. ...|+.|.+|.+++++||+.+|.+|++||+++|
T Consensus 21 ~~Gl~~~K~~l~~G~G~~~~~~gd~V~v~Y~g~~~dG~~fdss~~--~~~p~~f~lG~g~vi~G~e~aL~gm~~Ge~~~v 98 (130)
T 2lgo_A 21 SMSAQLEKKVLTPGDGVTKPQAGKKVTVHYDGRFPDGKQFDSSRS--RGKPFQFTLGAGEVIKGWDQGVATMTLGEKALF 98 (130)
T ss_dssp SSSCCCCEEEEECCCSSCCCCTTSEEEEEEEEECTTSCEEECTTT--TTCCEEEETTSTTSCHHHHHHHHHSCTTEEEEE
T ss_pred CCceEEEEEEEeccCCCccCCCCCEEEEEEEEEECCCCEEEccCc--CCCCEEEEeCCCCccHHHHHHHhCCCCCCEEEE
Confidence 4566555 999999944499999999999999999999998852 457999999999999999999999999999999
Q ss_pred EECCCCccCCCccccccccCCCCccEEEEEEEeee
Q 011164 347 TIAPEYAFGSAESQQELAVVPPNSTVHYEVELVSF 381 (492)
Q Consensus 347 ~ip~~~~yg~~~~~~~~~~ip~~~~l~~~v~l~~~ 381 (492)
.|||++|||..+.+ +.|||+++|+|+|+|++|
T Consensus 99 ~ip~~~aYG~~~~~---~~Ip~~~~l~f~VeL~~i 130 (130)
T 2lgo_A 99 TIPYQLAYGERGYP---PVIPPKATLVFEVELLAV 130 (130)
T ss_dssp EECTTTSTTTTCCS---TTSCSSCCEEEEEEEEEC
T ss_pred EECcHHHCCCCCCC---CCcCCCCeEEEEEEEEEC
Confidence 99999999988764 469999999999999875
No 46
>3uf8_A Ubiquitin-like protein SMT3, peptidyl-prolyl CIS- isomerase; ssgcid, seattle structural genomics center for in disease; HET: FK5; 1.50A {Burkholderia pseudomallei} PDB: 4ggq_C* 3vaw_A* 3uqa_A* 4g50_A* 4fn2_A* 3uqb_A* 4giv_A* 1euv_B 3v60_A 3v61_A 3v62_A*
Probab=99.85 E-value=9.1e-21 Score=173.67 Aligned_cols=123 Identities=31% Similarity=0.470 Sum_probs=107.3
Q ss_pred EEEEeecccceeeeeCCccEEEEEEecCCCCCCCCCCCEEEEEEEEEEcCCcEEEEcCCCCCcccEEEEcCCcccchhHH
Q 011164 253 IALELVSWKTVSEITDDKKVIKKILKEGDGFERPNEGAVVKVKLIGKLQDGTVFVKKGHSEEEQLFEFKTDEEQVIDGLD 332 (492)
Q Consensus 253 ~~v~l~~~~~~~d~~~d~~v~k~il~~G~g~~~p~~g~~V~v~y~~~~~~g~~~d~~~~~~~~~~~~~~lg~~~~~~gle 332 (492)
+++-+...--....+.+++++++++++|+| ..|..||.|++||++++.||++||+++ ....|+.|.+|.+++++||+
T Consensus 87 I~~~~eq~Gg~t~~~~~sGl~~~vl~~G~G-~~~~~gd~V~v~Y~g~l~dG~~fdss~--~~~~P~~f~lG~g~vi~G~e 163 (209)
T 3uf8_A 87 IEAHREQIGGSTVVTTESGLKYEDLTEGSG-AEARAGQTVSVHYTGWLTDGQKFDSSK--DRNDPFAFVLGGGMVIKGWD 163 (209)
T ss_dssp EEEECSCTTCCCCEECTTSCEEEEEECCCS-CBCCTTCEEEEEEEEEETTSCEEEESG--GGTCCEEEETTSSSSCHHHH
T ss_pred chhhccccccccccCCCCceEEEEEEcCCC-CcCCCCCEEEEEEEEEECCCCEEEEcc--ccCCCEEEEeCCCccchhHH
Confidence 344443333334456788999999999999 779999999999999999999999986 35789999999999999999
Q ss_pred HHHhccCcCcEEEEEECCCCccCCCccccccccCCCCccEEEEEEEeee
Q 011164 333 RAVITMKKNEVALLTIAPEYAFGSAESQQELAVVPPNSTVHYEVELVSF 381 (492)
Q Consensus 333 ~~l~~m~~Ge~~~i~ip~~~~yg~~~~~~~~~~ip~~~~l~~~v~l~~~ 381 (492)
.+|.+|++||+++|.|||++|||+.+.. +.|||+++|+|+|+|++|
T Consensus 164 eaL~gM~~Ge~~~v~Ipp~~aYG~~g~~---~~IP~~s~LvF~VeL~~I 209 (209)
T 3uf8_A 164 EGVQGMKVGGVRRLTIPPQLGYGARGAA---GVIPPNATLVFEVELLDV 209 (209)
T ss_dssp HHHTTCBTTCEEEEEECGGGTTTTTCBT---TTBCTTCCEEEEEEEEEC
T ss_pred HHHhCCCCCCEEEEEECcHHhCCCCCCC---CCcCCCCeEEEEEEEEEC
Confidence 9999999999999999999999998875 459999999999999975
No 47
>3oe2_A Peptidyl-prolyl CIS-trans isomerase; FKBP, ppiase, FK506; HET: TAR SRT; 1.60A {Pseudomonas syringae PV} SCOP: d.26.1.0
Probab=99.85 E-value=5.2e-21 Score=174.74 Aligned_cols=106 Identities=25% Similarity=0.475 Sum_probs=98.4
Q ss_pred eCCccEEEEEEecCCCCCCCCCCCEEEEEEEEEEcCCcEEEEcCCCCCcccEEEEcCCcccchhHHHHHhccCcCcEEEE
Q 011164 267 TDDKKVIKKILKEGDGFERPNEGAVVKVKLIGKLQDGTVFVKKGHSEEEQLFEFKTDEEQVIDGLDRAVITMKKNEVALL 346 (492)
Q Consensus 267 ~~d~~v~k~il~~G~g~~~p~~g~~V~v~y~~~~~~g~~~d~~~~~~~~~~~~~~lg~~~~~~gle~~l~~m~~Ge~~~i 346 (492)
+.++|+.++++++|+| ..|..||.|+|||++++.||++||++ ..|+.|.+| ++++||+.+|.+|++|++++|
T Consensus 114 ~~~sGl~y~vl~~G~G-~~p~~gd~V~V~Y~g~l~dG~vfDss-----~~P~~f~lG--~vI~G~eeaL~gMk~Gek~~v 185 (219)
T 3oe2_A 114 ELADGILMTELTPGTG-PKPDANGRVEVRYVGRLPDGKIFDQS-----TQPQWFRLD--SVISGWTSALQNMPTGAKWRL 185 (219)
T ss_dssp ECGGGCEEEEEECCCS-CCCCTTSEEEEEEEEECTTSCEEEEC-----SSCEEEEGG--GSCHHHHHHHTTCCTTCEEEE
T ss_pred ECCCCeEEEEEecCCC-ccCCCCCEEEEEEEEEECCCCEeecc-----CCcEEEEec--chhHHHHHHHhCCCCCCEEEE
Confidence 4578899999999999 89999999999999999999999987 578999998 899999999999999999999
Q ss_pred EECCCCccCCCccccccccCCCCccEEEEEEEeeeee
Q 011164 347 TIAPEYAFGSAESQQELAVVPPNSTVHYEVELVSFEK 383 (492)
Q Consensus 347 ~ip~~~~yg~~~~~~~~~~ip~~~~l~~~v~l~~~~~ 383 (492)
+|||++|||..+.+ +.|||+++|+|+|+|++|.+
T Consensus 186 ~IPp~lAYG~~g~~---~~IPpnstLvFeVeLl~Ik~ 219 (219)
T 3oe2_A 186 VIPSDQAYGAEGAG---DLIDPFTPLVFEIELIAVSQ 219 (219)
T ss_dssp EECGGGTTTTTCBT---TTBCTTCCEEEEEEEEEEEC
T ss_pred EECchhcCCCCCCC---CCCCCCCeEEEEEEEEEEeC
Confidence 99999999998875 46999999999999999863
No 48
>1q6h_A FKBP-type peptidyl-prolyl CIS-trans isomerase FKP; chaperone, peptidyl-prolyl isomerase, heat shock protein, FK family; HET: MSE; 1.97A {Escherichia coli} SCOP: d.26.1.1 PDB: 1q6i_A* 1q6u_A
Probab=99.85 E-value=7.6e-21 Score=175.09 Aligned_cols=107 Identities=50% Similarity=0.923 Sum_probs=101.2
Q ss_pred eecCCCeEEEEEEcccCcCCCCCCCEEEEEEEEEecCCCEEeecCCCCCcEEEEcCCCcccHhHHHHhccCcCccEEEEE
Q 011164 33 EIGNQGLKKKLVKEGEGWDTPENGDEVEVHYTGTLLDGTQFDSSRDRSTPFKFTLGQGNVIKGWDIGIKTMKKGENAVFT 112 (492)
Q Consensus 33 ~~~~~g~~~~il~~G~G~~~~~~gd~V~v~Y~~~~~dg~~~~ss~~~~~p~~f~lg~~~~~~gle~~l~~m~~Ge~~~~~ 112 (492)
..+++|++|+++++|+| ..|..||.|.|||++++.||++|++|+.++.|+.|.+| ++++||+++|.+|++|++++|+
T Consensus 117 ~~~~sGl~y~vl~~G~G-~~p~~gD~V~V~Y~g~l~dG~vfdss~~~g~p~~f~lg--~vI~G~eeaL~gMk~Gek~~v~ 193 (224)
T 1q6h_A 117 KTSSTGLVYQVVEAGKG-EAPKDSDTVVVNYKGTLIDGKEFDNSYTRGEPLSFRLD--GVIPGWTEGLKNIKKGGKIKLV 193 (224)
T ss_dssp EECTTSCEEEEEECCSS-CCCCTTCEEEEEEEEEETTSCEEEEGGGGTSCEEEEGG--GSCHHHHHHGGGSCTTCEEEEE
T ss_pred EECCCceEEEEEecccC-ccccCCCEEEEEEEEEeCCCCEEeeccccCCCEEEEcC--CcchhHHHHHcCCCCCCEEEEE
Confidence 45789999999999999 78999999999999999999999999987789999995 8999999999999999999999
Q ss_pred ecCCcccCCCCCCCCCCCCCceEEEEEEEEE
Q 011164 113 IPPELAYGESGSPPTIPPNATLQFDVELLSW 143 (492)
Q Consensus 113 i~~~~ayg~~~~~~~i~~~~~l~~~vel~~~ 143 (492)
|||+++||+.+.++ ||++++++|+|+|+++
T Consensus 194 IP~~laYG~~g~~~-IPp~stLiF~VeL~~i 223 (224)
T 1q6h_A 194 IPPELAYGKAGVPG-IPPNSTLVFDVELLDV 223 (224)
T ss_dssp ECGGGTTTTTCBTT-BCTTCCEEEEEEEEEE
T ss_pred ECchhhcCcCCCCC-CCCCCEEEEEEEEEEe
Confidence 99999999998875 9999999999999986
No 49
>2d9f_A FK506-binding protein 8 variant; FKBP, rapamycin, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=99.85 E-value=6.8e-21 Score=162.76 Aligned_cols=112 Identities=34% Similarity=0.550 Sum_probs=101.3
Q ss_pred eecCCC-eEEEEEEcccCc-CCCCCCCEEEEEEEEEecCCCEEeecCCCCCcEEEEcCCCcccHhHHHHhccCcCccEEE
Q 011164 33 EIGNQG-LKKKLVKEGEGW-DTPENGDEVEVHYTGTLLDGTQFDSSRDRSTPFKFTLGQGNVIKGWDIGIKTMKKGENAV 110 (492)
Q Consensus 33 ~~~~~g-~~~~il~~G~G~-~~~~~gd~V~v~Y~~~~~dg~~~~ss~~~~~p~~f~lg~~~~~~gle~~l~~m~~Ge~~~ 110 (492)
.++++| ++|+++++|+|. ..++.||.|.+||++++.||++|+++ .|+.|.+|.+++++||+++|.+|++|++++
T Consensus 12 ~~~~~g~l~~~vl~~G~G~~~~~~~gd~V~v~Y~g~~~dG~~fds~----~p~~f~lG~g~~i~G~e~~L~gm~~Ge~~~ 87 (135)
T 2d9f_A 12 DILGNGLLRKKTLVPGPPGSSRPVKGQVVTVHLQTSLENGTRVQEE----PELVFTLGDCDVIQALDLSVPLMDVGETAM 87 (135)
T ss_dssp ESSSSSSSEEEEEECCCSSCCCCCTTSEEEEEEEEEESSSCEEEEE----EEEEEETTSCCSCTTTTTTGGGSCTTCEEE
T ss_pred EECCCCCEEEEEEEcCCCCCccCCCCCEEEEEEEEEECCCCEEecC----CCEEEEeCCCChhHHHHHHHhCCCCCCEEE
Confidence 334555 999999999993 38999999999999999999999983 799999999999999999999999999999
Q ss_pred EEecCCcccCCCC-CCCCCCCCCceEEEEEEEEEeeccc
Q 011164 111 FTIPPELAYGESG-SPPTIPPNATLQFDVELLSWTSVKD 148 (492)
Q Consensus 111 ~~i~~~~ayg~~~-~~~~i~~~~~l~~~vel~~~~~~~~ 148 (492)
|.|||+++||+.+ .++.||++++++|+|+|+++....+
T Consensus 88 v~ip~~~aYG~~~~~~~~Ip~~~~l~f~vel~~v~~~~~ 126 (135)
T 2d9f_A 88 VTADSKYCYGPQGSRSPYIPPHAALCLEVTLKTAVDRPD 126 (135)
T ss_dssp EEECHHHHTCTTCCSSSCCCTTCCEEEEEEEEEEESSCS
T ss_pred EEEChhHccCcCCcCCCccCCCCeEEEEEEEEEeecCCc
Confidence 9999999999998 6678999999999999999976544
No 50
>1u79_A FKBP-type peptidyl-prolyl CIS-trans isomerase 3; TFKBP13, FK-506 binding protein; 1.85A {Arabidopsis thaliana} SCOP: d.26.1.1 PDB: 1y0o_A
Probab=99.84 E-value=1.2e-20 Score=160.18 Aligned_cols=112 Identities=23% Similarity=0.412 Sum_probs=99.9
Q ss_pred eCCccEEEEEEecCCCCCCCCCCCEEEEEEEEEEcCCcEEEEcCCCCCcccEEEEcCCcccchhHHHHHhc------cCc
Q 011164 267 TDDKKVIKKILKEGDGFERPNEGAVVKVKLIGKLQDGTVFVKKGHSEEEQLFEFKTDEEQVIDGLDRAVIT------MKK 340 (492)
Q Consensus 267 ~~d~~v~k~il~~G~g~~~p~~g~~V~v~y~~~~~~g~~~d~~~~~~~~~~~~~~lg~~~~~~gle~~l~~------m~~ 340 (492)
..+.+++++++++|+| ..|..||.|+|||++++.||++||+++ ...+|+.|.+|.+++++||+.+|.+ |++
T Consensus 9 ~~~~Gl~~~~l~~G~G-~~~~~gd~V~v~Y~g~~~dG~~fdss~--~~~~p~~f~lG~~~~i~G~~~~L~G~~~~~~m~~ 85 (129)
T 1u79_A 9 VSPSGLAFCDKVVGYG-PEAVKGQLIKAHYVGKLENGKVFDSSY--NRGKPLTFRIGVGEVIKGWDQGILGSDGIPPMLT 85 (129)
T ss_dssp ECTTSCEEEEEECCSS-CBCCTTCEEEEEEEEECTTSCEEEEHH--HHTSCEEEETTSSSSCHHHHHHHHCBTTBCCCBT
T ss_pred ECCCCeEEEEEEcCCC-CCCCCCCEEEEEEEEEECCCCEEEecC--CCCCCEEEEeCCCCccHHHHHHhcccccccccCC
Confidence 3467899999999999 889999999999999999999999885 2357999999999999999999998 999
Q ss_pred CcEEEEEECCCCccCCCcccc--ccccCCCCccEEEEEEEeee
Q 011164 341 NEVALLTIAPEYAFGSAESQQ--ELAVVPPNSTVHYEVELVSF 381 (492)
Q Consensus 341 Ge~~~i~ip~~~~yg~~~~~~--~~~~ip~~~~l~~~v~l~~~ 381 (492)
||+++|.|||++|||+.+... ....|||+++|+|+|+|+++
T Consensus 86 Ge~~~v~ip~~~aYG~~~~~~~~~~~~Ip~~~~l~f~vel~~i 128 (129)
T 1u79_A 86 GGKRTLRIPPELAYGDRGAGCKGGSCLIPPASVLLFDIEYIGK 128 (129)
T ss_dssp TCEEEEEECGGGTTGGGCEEEETTEEEECTTCCEEEEEEEEEE
T ss_pred CCEEEEEEChHHccCCCCCCccccCCcCCCCCeEEEEEEEEEe
Confidence 999999999999999887531 11469999999999999986
No 51
>1fd9_A Protein (macrophage infectivity potentiator prote; FKBP domain, long alpha helix, dimerisation VIA helical INTE isomerase; 2.41A {Legionella pneumophila} SCOP: d.26.1.1 PDB: 2uz5_A 2vcd_A*
Probab=99.84 E-value=2.2e-20 Score=170.84 Aligned_cols=110 Identities=25% Similarity=0.435 Sum_probs=100.2
Q ss_pred eeCCccEEEEEEecCCCCCCCCCCCEEEEEEEEEEcCCcEEEEcCCCCCcccEEEEcCCcccchhHHHHHhccCcCcEEE
Q 011164 266 ITDDKKVIKKILKEGDGFERPNEGAVVKVKLIGKLQDGTVFVKKGHSEEEQLFEFKTDEEQVIDGLDRAVITMKKNEVAL 345 (492)
Q Consensus 266 ~~~d~~v~k~il~~G~g~~~p~~g~~V~v~y~~~~~~g~~~d~~~~~~~~~~~~~~lg~~~~~~gle~~l~~m~~Ge~~~ 345 (492)
.+.++++.++++++|+| ..|..||.|+|||++++.||++||+++. .+.|+.|.+ +++++||+.+|.+|++|++++
T Consensus 102 ~~~~sGl~y~vl~~G~G-~~p~~gD~V~V~Y~g~l~dG~vfdss~~--~g~p~~f~l--g~vI~G~eeaL~gMk~Gek~~ 176 (213)
T 1fd9_A 102 VVLPSGLQYKVINSGNG-VKPGKSDTVTVEYTGRLIDGTVFDSTEK--TGKPATFQV--SQVIPGWTEALQLMPAGSTWE 176 (213)
T ss_dssp EECTTSCEEEEEECCCS-CCCCTTCEEEEEEEEEETTSCEEEEHHH--HCSCEEEEG--GGSCHHHHHHHTTCCTTCEEE
T ss_pred EECCCccEEEEEecCCC-ccCCCCCEEEEEEEEEECCCCEEeeccc--cCCCEEEEc--CchhhHHHHHHcCCCCCCEEE
Confidence 34578899999999999 8999999999999999999999999862 457999999 489999999999999999999
Q ss_pred EEECCCCccCCCccccccccCCCCccEEEEEEEeeeee
Q 011164 346 LTIAPEYAFGSAESQQELAVVPPNSTVHYEVELVSFEK 383 (492)
Q Consensus 346 i~ip~~~~yg~~~~~~~~~~ip~~~~l~~~v~l~~~~~ 383 (492)
|.|||++|||..+.+ +.|||+++|+|+|+|+++.+
T Consensus 177 v~IP~~laYG~~g~~---~~Ipp~stLiF~VeLl~v~~ 211 (213)
T 1fd9_A 177 IYVPSGLAYGPRSVG---GPIGPNETLIFKIHLISVKK 211 (213)
T ss_dssp EEECGGGTTTTCCCS---SSCCTTCCEEEEEEEEEEEC
T ss_pred EEECchhccCccCCC---CCCCCCCeEEEEEEEEEEEc
Confidence 999999999998764 46999999999999999975
No 52
>2pbc_A FK506-binding protein 2; endoplasmic reticulum, isomerase, polymorphism, rotamase, structural genomics, structural genomics consortium, SGC; 1.80A {Homo sapiens}
Probab=99.83 E-value=4.8e-20 Score=149.91 Aligned_cols=95 Identities=53% Similarity=0.915 Sum_probs=90.3
Q ss_pred CCCCCCCEEEEEEEEEecCCCEEeecCCCCCcEEEEcCCCcccHhHHHHhccCcCccEEEEEecCCcccCCCCCCCCCCC
Q 011164 51 DTPENGDEVEVHYTGTLLDGTQFDSSRDRSTPFKFTLGQGNVIKGWDIGIKTMKKGENAVFTIPPELAYGESGSPPTIPP 130 (492)
Q Consensus 51 ~~~~~gd~V~v~Y~~~~~dg~~~~ss~~~~~p~~f~lg~~~~~~gle~~l~~m~~Ge~~~~~i~~~~ayg~~~~~~~i~~ 130 (492)
..++.||.|.+||++++.||++|++|+.++.|+.|.+|.+++++||+++|.+|++|++++|.||+++|||+.+.++.||+
T Consensus 4 ~~~~~gd~V~v~y~~~~~dG~~~d~s~~~~~p~~f~lG~~~~i~g~~~~l~gm~~Ge~~~v~ip~~~ayG~~~~~~~Ip~ 83 (102)
T 2pbc_A 4 IKSRKGDVLHMHYTGKLEDGTEFDSSLPQNQPFVFSLGTGQVIKGWDQGLLGMCEGEKRKLVIPSELGYGERGAPPKIPG 83 (102)
T ss_dssp CCCCTTCEEEEEEEEECTTSCEEEESTTTTCCEEEETTSSSSCHHHHTTSTTCCTTCEEEEEECGGGTTTTTCBTTTBCT
T ss_pred CcCCCCCEEEEEEEEEECCCCEEEeCCCCCCCEEEEeCCCCccHHHHHHHhCCCCCCEEEEEECHHHCcCCCCCCCCcCc
Confidence 67899999999999999899999999877789999999999999999999999999999999999999999988778999
Q ss_pred CCceEEEEEEEEEee
Q 011164 131 NATLQFDVELLSWTS 145 (492)
Q Consensus 131 ~~~l~~~vel~~~~~ 145 (492)
+++++|+|+|+++..
T Consensus 84 ~~~l~f~v~l~~v~~ 98 (102)
T 2pbc_A 84 GATLVFEVELLKIER 98 (102)
T ss_dssp TCCEEEEEEEEEEGG
T ss_pred CCeEEEEEEEEEecc
Confidence 999999999999865
No 53
>1q6h_A FKBP-type peptidyl-prolyl CIS-trans isomerase FKP; chaperone, peptidyl-prolyl isomerase, heat shock protein, FK family; HET: MSE; 1.97A {Escherichia coli} SCOP: d.26.1.1 PDB: 1q6i_A* 1q6u_A
Probab=99.82 E-value=1.3e-19 Score=166.78 Aligned_cols=106 Identities=30% Similarity=0.535 Sum_probs=97.3
Q ss_pred CCccEEEEEEecCCCCCCCCCCCEEEEEEEEEEcCCcEEEEcCCCCCcccEEEEcCCcccchhHHHHHhccCcCcEEEEE
Q 011164 268 DDKKVIKKILKEGDGFERPNEGAVVKVKLIGKLQDGTVFVKKGHSEEEQLFEFKTDEEQVIDGLDRAVITMKKNEVALLT 347 (492)
Q Consensus 268 ~d~~v~k~il~~G~g~~~p~~g~~V~v~y~~~~~~g~~~d~~~~~~~~~~~~~~lg~~~~~~gle~~l~~m~~Ge~~~i~ 347 (492)
.++++.++++++|+| ..|..||.|+|||++++.||++||+++. .+.|+.|.+ +++++||+.+|.+|++|++++|.
T Consensus 119 ~~sGl~y~vl~~G~G-~~p~~gD~V~V~Y~g~l~dG~vfdss~~--~g~p~~f~l--g~vI~G~eeaL~gMk~Gek~~v~ 193 (224)
T 1q6h_A 119 SSTGLVYQVVEAGKG-EAPKDSDTVVVNYKGTLIDGKEFDNSYT--RGEPLSFRL--DGVIPGWTEGLKNIKKGGKIKLV 193 (224)
T ss_dssp CTTSCEEEEEECCSS-CCCCTTCEEEEEEEEEETTSCEEEEGGG--GTSCEEEEG--GGSCHHHHHHGGGSCTTCEEEEE
T ss_pred CCCceEEEEEecccC-ccccCCCEEEEEEEEEeCCCCEEeeccc--cCCCEEEEc--CCcchhHHHHHcCCCCCCEEEEE
Confidence 477899999999999 8999999999999999999999999863 457999999 48999999999999999999999
Q ss_pred ECCCCccCCCccccccccCCCCccEEEEEEEeeee
Q 011164 348 IAPEYAFGSAESQQELAVVPPNSTVHYEVELVSFE 382 (492)
Q Consensus 348 ip~~~~yg~~~~~~~~~~ip~~~~l~~~v~l~~~~ 382 (492)
|||+++||..+.+ .|||+++|+|+|+|++|.
T Consensus 194 IP~~laYG~~g~~----~IPp~stLiF~VeL~~ik 224 (224)
T 1q6h_A 194 IPPELAYGKAGVP----GIPPNSTLVFDVELLDVK 224 (224)
T ss_dssp ECGGGTTTTTCBT----TBCTTCCEEEEEEEEEEC
T ss_pred ECchhhcCcCCCC----CCCCCCEEEEEEEEEEeC
Confidence 9999999988764 399999999999999873
No 54
>2pbc_A FK506-binding protein 2; endoplasmic reticulum, isomerase, polymorphism, rotamase, structural genomics, structural genomics consortium, SGC; 1.80A {Homo sapiens}
Probab=99.81 E-value=1.4e-19 Score=147.13 Aligned_cols=96 Identities=31% Similarity=0.520 Sum_probs=88.4
Q ss_pred CCCCCCCEEEEEEEEEEcCCcEEEEcCCCCCcccEEEEcCCcccchhHHHHHhccCcCcEEEEEECCCCccCCCcccccc
Q 011164 284 ERPNEGAVVKVKLIGKLQDGTVFVKKGHSEEEQLFEFKTDEEQVIDGLDRAVITMKKNEVALLTIAPEYAFGSAESQQEL 363 (492)
Q Consensus 284 ~~p~~g~~V~v~y~~~~~~g~~~d~~~~~~~~~~~~~~lg~~~~~~gle~~l~~m~~Ge~~~i~ip~~~~yg~~~~~~~~ 363 (492)
..|..||.|++||++++.||++|++++ ....|+.|.+|.+++++||+.+|.+|++||+++|.+||++|||..+..
T Consensus 4 ~~~~~gd~V~v~y~~~~~dG~~~d~s~--~~~~p~~f~lG~~~~i~g~~~~l~gm~~Ge~~~v~ip~~~ayG~~~~~--- 78 (102)
T 2pbc_A 4 IKSRKGDVLHMHYTGKLEDGTEFDSSL--PQNQPFVFSLGTGQVIKGWDQGLLGMCEGEKRKLVIPSELGYGERGAP--- 78 (102)
T ss_dssp CCCCTTCEEEEEEEEECTTSCEEEEST--TTTCCEEEETTSSSSCHHHHTTSTTCCTTCEEEEEECGGGTTTTTCBT---
T ss_pred CcCCCCCEEEEEEEEEECCCCEEEeCC--CCCCCEEEEeCCCCccHHHHHHHhCCCCCCEEEEEECHHHCcCCCCCC---
Confidence 679999999999999999999999986 246899999999999999999999999999999999999999988764
Q ss_pred ccCCCCccEEEEEEEeeeeec
Q 011164 364 AVVPPNSTVHYEVELVSFEKE 384 (492)
Q Consensus 364 ~~ip~~~~l~~~v~l~~~~~~ 384 (492)
..|||+++|+|+|+|+++.+.
T Consensus 79 ~~Ip~~~~l~f~v~l~~v~~~ 99 (102)
T 2pbc_A 79 PKIPGGATLVFEVELLKIERR 99 (102)
T ss_dssp TTBCTTCCEEEEEEEEEEGGG
T ss_pred CCcCcCCeEEEEEEEEEeccc
Confidence 469999999999999999864
No 55
>1q1c_A FK506-binding protein 4; rotamase, TPR repeat, nuclear protein, phosphorylation, isomerase; 1.90A {Homo sapiens} SCOP: d.26.1.1 d.26.1.1 PDB: 1n1a_A 1rot_A 1rou_A
Probab=99.81 E-value=3.3e-19 Score=171.07 Aligned_cols=117 Identities=42% Similarity=0.603 Sum_probs=106.4
Q ss_pred eeeee--CCccEEEEEEecCCCCCCCCCCCEEEEEEEEEEcCCcEEEEcCCCCCcccEEEEcCCcccchhHHHHHhccCc
Q 011164 263 VSEIT--DDKKVIKKILKEGDGFERPNEGAVVKVKLIGKLQDGTVFVKKGHSEEEQLFEFKTDEEQVIDGLDRAVITMKK 340 (492)
Q Consensus 263 ~~d~~--~d~~v~k~il~~G~g~~~p~~g~~V~v~y~~~~~~g~~~d~~~~~~~~~~~~~~lg~~~~~~gle~~l~~m~~ 340 (492)
..|++ .++++.++++++|.|...|..||.|+|||++++.||++||+++ ....|+.|.+|.+++++||+.+|.+|++
T Consensus 42 ~~di~~~~~~gl~~~vl~~G~G~~~~~~gd~V~v~Y~g~~~dG~~fdss~--~~~~p~~f~lG~g~vi~G~e~aL~gm~~ 119 (280)
T 1q1c_A 42 GVDISPKQDEGVLKVIKREGTGTEMPMIGDRVFVHYTGWLLDGTKFDSSL--DRKDKFSFDLGKGEVIKAWDIAIATMKV 119 (280)
T ss_dssp CEECCSSCSSSEEEEEEECCSSSCCCCTTCEEEEEEEEEETTSCEEEEST--TSSSCEEEETTTTSSCHHHHHHHTTCCT
T ss_pred ccccccCCCCceEEEEEeCCCCCcCCCCCCEEEEEEEEEECCCCEEEecc--cCCCCEEEEECCcChhHHHHHHHhcCCC
Confidence 34666 6899999999999996569999999999999999999999985 3468999999999999999999999999
Q ss_pred CcEEEEEECCCCccCCCccccccccCCCCccEEEEEEEeeeeec
Q 011164 341 NEVALLTIAPEYAFGSAESQQELAVVPPNSTVHYEVELVSFEKE 384 (492)
Q Consensus 341 Ge~~~i~ip~~~~yg~~~~~~~~~~ip~~~~l~~~v~l~~~~~~ 384 (492)
||+++|.|||++|||..+.+ +.||++++|+|+|+|+++...
T Consensus 120 Ge~~~v~ipp~~aYG~~g~~---~~Ip~~~~lvf~Vel~~i~~~ 160 (280)
T 1q1c_A 120 GEVCHITCKPEYAYGSAGSP---PKIPPNATLVFEVELFEFKGE 160 (280)
T ss_dssp TCEEEEEECGGGTTTTTCBT---TTBCTTCCEEEEEEEEEEECE
T ss_pred CCEEEEEECcHHhCCCcCcc---CCCCCCCcEEEEEEeeeeccc
Confidence 99999999999999998864 579999999999999999853
No 56
>4dt4_A FKBP-type 16 kDa peptidyl-prolyl CIS-trans isomer; FKBP domain, IF domain, chaperone, peptidyl-prolyl isomerase isomerase; 1.35A {Escherichia coli}
Probab=99.79 E-value=1.1e-19 Score=159.33 Aligned_cols=133 Identities=22% Similarity=0.336 Sum_probs=98.8
Q ss_pred CCCCCCEEEEEEEEEecCCCEEeecCCCCCcEEEEcCCCcccHhHHHHhccCcCccEEEEEecCCcccCCCCCCCCCCCC
Q 011164 52 TPENGDEVEVHYTGTLLDGTQFDSSRDRSTPFKFTLGQGNVIKGWDIGIKTMKKGENAVFTIPPELAYGESGSPPTIPPN 131 (492)
Q Consensus 52 ~~~~gd~V~v~Y~~~~~dg~~~~ss~~~~~p~~f~lg~~~~~~gle~~l~~m~~Ge~~~~~i~~~~ayg~~~~~~~i~~~ 131 (492)
.+++||.|.+||++++.||++|++|+.++.|+.|.+|.+++++||+++|.+|++|++++|.|||++|||+++
T Consensus 24 ~i~~gd~V~v~Y~g~l~dG~vfDss~~~~~P~~f~lG~g~vipG~eeaL~gm~~Ge~~~v~Ipp~~AYG~~~-------- 95 (169)
T 4dt4_A 24 SVQSNSAVLVHFTLKLDDGTTAESTRNNGKPALFRLGDASLSEGLEQHLLGLKVGDKTTFSLEPDAAFGVPS-------- 95 (169)
T ss_dssp SCCTTCEEEEEEEEEETTSCEEEEHHHHTSCEEEETTSSSSCHHHHHHHTTCCTTCEEEEEECGGGTTCCCC--------
T ss_pred cCCCCCEEEEEEEEEECCCCEEEecCCCCCCEEEEECCCCccHHHHHHHcCCCCCCEEEEEEChHHhcCCCC--------
Confidence 588999999999999999999999987668999999999999999999999999999999999999999876
Q ss_pred CceEEEEEEEEEeecccccccccceeeeeecCc---ccCCCCCcceEEEEEEEEcCCCcEEeeec
Q 011164 132 ATLQFDVELLSWTSVKDICKDGGIIKKILKEGE---KWENPKDLDEVLVNYEARLEDGMVVGKAD 193 (492)
Q Consensus 132 ~~l~~~vel~~~~~~~~~~~d~~~~k~i~~~g~---g~~~~~~~d~V~v~y~~~l~~g~~~~~~~ 193 (492)
..++..+..-.+.....+ ..+..+.--...|. +..+...++.|++|+||||||.++.|+-+
T Consensus 96 ~~lv~~vp~~~f~~~~~~-~~G~~~~~~~~~G~~~~~~V~~v~~~~V~vD~NHPLAGk~L~F~ve 159 (169)
T 4dt4_A 96 PDLIQYFSRREFMDAGEP-EIGAIMLFTAMDGSEMPGVIREINGDSITVDFNHPLAGQTVHFDIE 159 (169)
T ss_dssp GGGEEEEEGGGGTTTCCC-CTTCEEEEECTTSCEEEEEEEEEETTEEEEECSCTTTTCCEEEEEE
T ss_pred hHHEEEeCHHHCCCcCCC-CCCcEEEEECCCCCEEEEEEEEEcCCEEEEeCCCccCCCEEEEEEE
Confidence 334544443333210001 11111110011121 22333456899999999999999998764
No 57
>2kr7_A FKBP-type peptidyl-prolyl CIS-trans isomerase SLY; protein, rotamase; NMR {Helicobacter pylori}
Probab=99.78 E-value=6.9e-19 Score=152.67 Aligned_cols=134 Identities=17% Similarity=0.241 Sum_probs=100.0
Q ss_pred CCCCCCCEEEEEEEEEec-CCCEEeecCCCCCcEEEEcCCCcccHhHHHHhccCcCccEEEEEecCCcccCCCCCCCCCC
Q 011164 51 DTPENGDEVEVHYTGTLL-DGTQFDSSRDRSTPFKFTLGQGNVIKGWDIGIKTMKKGENAVFTIPPELAYGESGSPPTIP 129 (492)
Q Consensus 51 ~~~~~gd~V~v~Y~~~~~-dg~~~~ss~~~~~p~~f~lg~~~~~~gle~~l~~m~~Ge~~~~~i~~~~ayg~~~~~~~i~ 129 (492)
..++.||.|++||++++. ||++|++|+.. .|+.|.+|.+++++||+++|.+|++|++++|.|||++|||+++
T Consensus 5 ~~i~~gd~V~v~Y~g~~~~dG~~fdss~~~-~p~~f~~G~g~vipg~e~aL~gm~~Ge~~~v~ipp~~aYG~~~------ 77 (151)
T 2kr7_A 5 DLESIKQAALIEYEVREQGSSIVLDSNISK-EPLEFIIGTNQIIAGLEKAVLKAQIGEWEEVVIAPEEAYGVYE------ 77 (151)
T ss_dssp CCTTSCCEEEEEEEEEESSCSCEEEESTTT-CCEEEETTCCCSCHHHHHHHTTCCBTCEEEEEECGGGTTCSSC------
T ss_pred cCCCCCCEEEEEEEEEECCCCCEEEeCCCC-cCEEEEECCCCccHHHHHHHcCCCCCCEEEEEEecHHHcCCCC------
Confidence 467899999999999998 99999999864 8999999999999999999999999999999999999999876
Q ss_pred CCCceEEEEEEEEEeecccccccccceeeeeecC---cccCCCCCcceEEEEEEEEcCCCcEEeeecCe
Q 011164 130 PNATLQFDVELLSWTSVKDICKDGGIIKKILKEG---EKWENPKDLDEVLVNYEARLEDGMVVGKADGV 195 (492)
Q Consensus 130 ~~~~l~~~vel~~~~~~~~~~~d~~~~k~i~~~g---~g~~~~~~~d~V~v~y~~~l~~g~~~~~~~~~ 195 (492)
..+++.+....+ ....+ ..+..+..-...| .+..+...++.|++||||||||.++.|+-+-+
T Consensus 78 --~~~v~~v~~~~f-~~~~~-~~G~~~~~~~~~G~~~~~~V~~v~~~~v~vD~NHPLAG~~L~F~v~v~ 142 (151)
T 2kr7_A 78 --SSYLQEVPRDQF-EGIEL-EKGMSVFGQTEDNQTIQAIIKDFSATHVMVDYNHPLAGKTLAFRFKVL 142 (151)
T ss_dssp --SCEEEEEEGGGG-TTSCC-CTTCEEEEEETTTEEEEEEEEEECSSEEEEEECCTTSCCCEEEEEEEE
T ss_pred --cceEEEEcHHHc-CCCCC-ccCCEEEEECCCCCEEEEEEEEECCCEEEEECCCcCCCCEEEEEEEEE
Confidence 345555554444 10011 1111111111112 12234446689999999999999999876433
No 58
>3prb_A FKBP-type peptidyl-prolyl CIS-trans isomerase; chaperone; 2.20A {Methanocaldococcus jannaschii} PDB: 3prd_A
Probab=99.78 E-value=1.4e-19 Score=166.36 Aligned_cols=168 Identities=24% Similarity=0.324 Sum_probs=117.4
Q ss_pred CCCCCEEEEEEEEEecCCCEEeecCCC-------------CCcEEEEcCCCcccHhHHHHhccCcCccEEEEEecCCccc
Q 011164 53 PENGDEVEVHYTGTLLDGTQFDSSRDR-------------STPFKFTLGQGNVIKGWDIGIKTMKKGENAVFTIPPELAY 119 (492)
Q Consensus 53 ~~~gd~V~v~Y~~~~~dg~~~~ss~~~-------------~~p~~f~lg~~~~~~gle~~l~~m~~Ge~~~~~i~~~~ay 119 (492)
++.||.|.+||++++ ||++|++|+.+ +.|+.|.+|.+++++||+++|.+|++|++++|.|||++||
T Consensus 2 i~~Gd~V~v~Y~g~l-dG~vfDss~~~~A~e~gi~~~~~~~~P~~f~lG~g~vIpG~eeaL~Gm~vGek~~v~Ippe~AY 80 (231)
T 3prb_A 2 VEKGKMVKISYDGYV-DGKLFDTTNEELAKKEGIYNPAMIYGPVAIFAGEGQVLPGLDEAILEMDVGEEREVVLPPEKAF 80 (231)
T ss_dssp CCTTCEEEEEEEEEE-TTEEEEESCHHHHHHTTCCCTTSCCSCEEEETTSSSSCHHHHHHHHTCCTTCEEEEEECGGGTT
T ss_pred CCCCCEEEEEEEEEE-CCEEEEeccchhcccccccccccCCCCEEEEeCCCcHHHHHHHHHcCCCCCCEEEEEeCcHHhc
Confidence 678999999999999 99999999752 3799999999999999999999999999999999999999
Q ss_pred CCCCCCCCCCCCCceEEEEEEEEEeecccccc-cccceeeeeecCcccCCCCCcceEEEEEEEEcCCCcEEeeecCeeeE
Q 011164 120 GESGSPPTIPPNATLQFDVELLSWTSVKDICK-DGGIIKKILKEGEKWENPKDLDEVLVNYEARLEDGMVVGKADGVEFT 198 (492)
Q Consensus 120 g~~~~~~~i~~~~~l~~~vel~~~~~~~~~~~-d~~~~k~i~~~g~g~~~~~~~d~V~v~y~~~l~~g~~~~~~~~~~~~ 198 (492)
|.++. .++..+..-.+.. .+... .+..+. . ....+..+...++.|++|+||||||.++.|+-+-....
T Consensus 81 Ge~~~--------~lv~~vp~~~f~~-~~~~~~vG~~~~-~-~~~~g~V~~v~~~~V~vD~NHPLAGk~L~F~vev~~v~ 149 (231)
T 3prb_A 81 GKRDP--------SKIKLIPLSEFTK-RGIKPIKGLTIT-I-DGIPGKIVSINSGRVLVDFNHELAGKEVKYRIKIEEVV 149 (231)
T ss_dssp CCCCG--------GGEEEEETHHHHT-TTCCCCTTCEEE-E-TTEEEEEEEEETTEEEEECSCTTTTCCEEEEEEEEEEC
T ss_pred CCCCh--------HHEEecCHHHCCc-ccCCCCCCcEEE-e-cCCCEEEEEEcCCEEEEeCCCccCCCEEEEEEEEEEEe
Confidence 99873 3444433222211 01110 111111 0 11123344445689999999999999999987555444
Q ss_pred eCCCCccchHHHHHhc----cc---cCcEEEEEecCCCccC
Q 011164 199 VKDGHFCPTLAKAVKT----MK---KGEKVLLAVKPQYGFG 232 (492)
Q Consensus 199 ~g~~~~~~~l~~~l~~----m~---~ge~~~i~vp~~~~~g 232 (492)
-...+.+.++-.-..+ |+ .++.+.|.+|+++.|.
T Consensus 150 eat~eei~~~~~~~~~~~~~~~~~~~~~~~~i~~p~~~~~~ 190 (231)
T 3prb_A 150 DDKKNIVKEIVKMYVPRLSDVKVTIRNGTVKIELPEFAPFI 190 (231)
T ss_dssp CSHHHHHHHHHHHHCTTCCCCEEEEETTEEEEECCTTGGGS
T ss_pred cCCHHHHHHHHHHhcCCccceEEEEeCCeEEEEcCHHHhhh
Confidence 3333444444433332 23 3678999999986553
No 59
>3pr9_A FKBP-type peptidyl-prolyl CIS-trans isomerase; FKBP protein, chaperone; 1.95A {Methanocaldococcus jannaschii} SCOP: d.26.1.0 PDB: 3pra_A
Probab=99.77 E-value=1.7e-19 Score=156.64 Aligned_cols=132 Identities=27% Similarity=0.377 Sum_probs=98.1
Q ss_pred CCCCCEEEEEEEEEecCCCEEeecCCC-------------CCcEEEEcCCCcccHhHHHHhccCcCccEEEEEecCCccc
Q 011164 53 PENGDEVEVHYTGTLLDGTQFDSSRDR-------------STPFKFTLGQGNVIKGWDIGIKTMKKGENAVFTIPPELAY 119 (492)
Q Consensus 53 ~~~gd~V~v~Y~~~~~dg~~~~ss~~~-------------~~p~~f~lg~~~~~~gle~~l~~m~~Ge~~~~~i~~~~ay 119 (492)
+++||.|.+||++++ ||++|++|+.+ +.|+.|.+|.+++++||+++|.+|++|++++|.|||++||
T Consensus 2 i~~Gd~V~v~Y~g~l-dG~vfDss~~~~a~~~g~~~~~~~~~P~~f~vG~g~vi~G~eeaL~gm~~Ge~~~v~Ipp~~aY 80 (157)
T 3pr9_A 2 VEKGKMVKISYDGYV-DGKLFDTTNEELAKKEGIYNPAMIYGPVAIFAGEGQVLPGLDEAILEMDVGEEREVVLPPEKAF 80 (157)
T ss_dssp CCTTCEEEEEEEEEE-TTEEEEESCHHHHHHHTCCCTTSCCSCEEEETTSSSSCHHHHHHHHHCCTTCEEEEEECGGGTT
T ss_pred CCCCCEEEEEEEEEE-CCEEEEeccccccccccccccccCCCCEEEEECCCcHHHHHHHHHcCCCCCCEEEEEECcHHhc
Confidence 678999999999999 99999999752 3799999999999999999999999999999999999999
Q ss_pred CCCCCCCCCCCCCceEEEEEEEEEeecccccc-cccceeeeeecCcccCCCCCcceEEEEEEEEcCCCcEEeeecCee
Q 011164 120 GESGSPPTIPPNATLQFDVELLSWTSVKDICK-DGGIIKKILKEGEKWENPKDLDEVLVNYEARLEDGMVVGKADGVE 196 (492)
Q Consensus 120 g~~~~~~~i~~~~~l~~~vel~~~~~~~~~~~-d~~~~k~i~~~g~g~~~~~~~d~V~v~y~~~l~~g~~~~~~~~~~ 196 (492)
|+++. .++..+..-.+... +... .+..+. . ....+..+...++.|++|+||||||.++.|+-+-..
T Consensus 81 G~~~~--------~~V~~v~~~~f~~~-~~~~~~G~~~~-~-~~~~~~V~~v~~~~V~vD~NHPLAG~~L~F~v~v~~ 147 (157)
T 3pr9_A 81 GKRDP--------SKIKLIPLSEFTKR-GIKPIKGLTIT-I-DGIPGKIVSINSGRVLVDFNHELAGKEVKYRIKIEE 147 (157)
T ss_dssp CCCCG--------GGEEEEEHHHHHHT-TCCCCTTCEEE-E-TTEEEEEEEEETTEEEEECSCTTTTCCEEEEEEEEE
T ss_pred CCCCh--------HhEEEcCHHHCCcc-cCCcCCCcEEE-e-cCCCeEEEEEcCCEEEEECCCccCCCeEEEEEEEEE
Confidence 98773 34444443323210 1111 111111 0 111233444566899999999999999998865443
No 60
>1p5q_A FKBP52, FK506-binding protein 4; isomerase; 2.80A {Homo sapiens} SCOP: a.118.8.1 d.26.1.1 PDB: 1qz2_A
Probab=99.77 E-value=3.8e-18 Score=169.42 Aligned_cols=111 Identities=30% Similarity=0.621 Sum_probs=97.8
Q ss_pred cceeeecCCCeEEEEEEcccCcCCCCCCCEEEEEEEEEecCCCEEeecCCCCCcEEEEcCCCc---ccHhHHHHhccCcC
Q 011164 29 GEEKEIGNQGLKKKLVKEGEGWDTPENGDEVEVHYTGTLLDGTQFDSSRDRSTPFKFTLGQGN---VIKGWDIGIKTMKK 105 (492)
Q Consensus 29 ~~~~~~~~~g~~~~il~~G~G~~~~~~gd~V~v~Y~~~~~dg~~~~ss~~~~~p~~f~lg~~~---~~~gle~~l~~m~~ 105 (492)
.......++|+.|+|+++|+|...|..|+.|.|||++++ +|++||++ |+.|.+|.|. ++++|+.||.+|++
T Consensus 17 ~~~~~~~~~~~~~~~~~~g~g~~~p~~~~~v~v~y~g~~-~g~~fd~~-----~~~f~lG~g~~~~~~~~~e~al~~~~~ 90 (336)
T 1p5q_A 17 RGSHMEEDGGIIRRIQTRGEGYAKPNEGAIVEVALEGYY-KDKLFDQR-----ELRFEIGEGENLDLPYGLERAIQRMEK 90 (336)
T ss_dssp -----CCTTSEEEEEEECCCCSCCCCTTCEEEEEEEEEE-TTEEEEEE-----EEEEETTCGGGGTCCHHHHHHHTTCCT
T ss_pred cceeecCCCcEEEEEEeCCCCCCCCCCCCeEEEEEEEEE-CCEEEecC-----CeEEEeCCCCccccchHHHHHHhcCCC
Confidence 444456889999999999999668999999999999998 99999986 8999999886 58999999999999
Q ss_pred ccEEEEEecCCcccCCCCCCC-CCCCCCceEEEEEEEEEee
Q 011164 106 GENAVFTIPPELAYGESGSPP-TIPPNATLQFDVELLSWTS 145 (492)
Q Consensus 106 Ge~~~~~i~~~~ayg~~~~~~-~i~~~~~l~~~vel~~~~~ 145 (492)
||++.|.|+|.++||..+... .+|+++.+.|++.|.++..
T Consensus 91 Ge~~~l~i~p~~ayg~~g~~~~~i~~~~~l~f~~~L~~~~~ 131 (336)
T 1p5q_A 91 GEHSIVYLKPSYAFGSVGKEKFQIPPNAELKYELHLKSFEK 131 (336)
T ss_dssp TCEEEEEECTTTTTTTTCBGGGTBCSSCCEEEEEEEEEEEC
T ss_pred CCeEEEEECCccccCcCCCCccCCCCCCeEEEEEEEeeccc
Confidence 999999999999999998764 5899999999999988864
No 61
>1ix5_A FKBP; ppiase, isomerase; NMR {Methanothermococcusthermolithotrophicus} SCOP: d.26.1.1
Probab=99.76 E-value=1.1e-19 Score=157.79 Aligned_cols=132 Identities=23% Similarity=0.383 Sum_probs=96.8
Q ss_pred CCCCCCEEEEEEEEEecCCCEEeecCC-------------CCCcEEEEcCCCcccHhHHHHhccCcCccEEEEEecCCcc
Q 011164 52 TPENGDEVEVHYTGTLLDGTQFDSSRD-------------RSTPFKFTLGQGNVIKGWDIGIKTMKKGENAVFTIPPELA 118 (492)
Q Consensus 52 ~~~~gd~V~v~Y~~~~~dg~~~~ss~~-------------~~~p~~f~lg~~~~~~gle~~l~~m~~Ge~~~~~i~~~~a 118 (492)
+++.||.|.+||++++.||++|++|+. ...|+.|.+|.+++++||+++|.+|++|++++|.|||++|
T Consensus 1 ~i~~gd~V~v~Y~g~~~dG~~fdss~~~~a~~~g~~~~~~~~~P~~f~~G~g~vi~G~eeaL~gm~~Ge~~~v~ipp~~a 80 (151)
T 1ix5_A 1 MVDKGVKIKVDYIGKLESGDVFDTSIEEVAKEAGIYAPDREYEPLEFVVGEGQLIQGFEEAVLDMEVGDEKTVKIPAEKA 80 (151)
T ss_dssp CCCTTCEEEECCEECCTTSCCCEESCHHHHHHHTCCCSSCCCCCEEEETTTTCSCHHHHHHHHTCCTTCCCEEEECTTTS
T ss_pred CCCCCCEEEEEEEEEECCCCEEEecchhhcccccccccccCCCCEEEEECCCChhHHHHHHHcCCCCCCEEEEEECcHHH
Confidence 367999999999999989999999963 2379999999999999999999999999999999999999
Q ss_pred cCCCCCCCCCCCCCceEEEEEEEEEeecccccccccceeeeeecCcccCCCCCcceEEEEEEEEcCCCcEEeeec
Q 011164 119 YGESGSPPTIPPNATLQFDVELLSWTSVKDICKDGGIIKKILKEGEKWENPKDLDEVLVNYEARLEDGMVVGKAD 193 (492)
Q Consensus 119 yg~~~~~~~i~~~~~l~~~vel~~~~~~~~~~~d~~~~k~i~~~g~g~~~~~~~d~V~v~y~~~l~~g~~~~~~~ 193 (492)
||+++. .+++.+.+..+.........+..+. . ..-.+..+...++.|++||||+|||.++.|+-+
T Consensus 81 YG~~~~--------~~v~~v~~~~f~~~~~~~~~G~~~~-~-~~~~~~V~~v~~~~v~vD~NHPLAG~~L~F~ve 145 (151)
T 1ix5_A 81 YGNRNE--------MLIQKIPRDAFKEADFEPEEGMVIL-A-EGIPATITEVTDNEVTLDFNHELAGKDLVFTIK 145 (151)
T ss_dssp SCSCCS--------TTBCCEETHHHHTSTTCCCTTEEEE-S-SSCEEEEEEEETTEEEEECCCSSTTCCEEEECC
T ss_pred CCCCCc--------cEEEEEEHHHcCccCCcccccCEEE-E-CCeEEEEEEEcCCEEEEeCCCCCCCCeEEEEEE
Confidence 998763 3455555444421000001111110 0 001222333456899999999999999998754
No 62
>2kfw_A FKBP-type peptidyl-prolyl CIS-trans isomerase SLYD; protein, cobalt, copper, cytoplasm, metal- binding, nickel, rotamase, zinc; NMR {Escherichia coli}
Probab=99.76 E-value=1.3e-18 Score=156.53 Aligned_cols=132 Identities=18% Similarity=0.199 Sum_probs=98.3
Q ss_pred CCCCCEEEEEEEEEecCCCEEeecCCCCCcEEEEcCCCcccHhHHHHhccCcCccEEEEEecCCcccCCCCCCCCCCCCC
Q 011164 53 PENGDEVEVHYTGTLLDGTQFDSSRDRSTPFKFTLGQGNVIKGWDIGIKTMKKGENAVFTIPPELAYGESGSPPTIPPNA 132 (492)
Q Consensus 53 ~~~gd~V~v~Y~~~~~dg~~~~ss~~~~~p~~f~lg~~~~~~gle~~l~~m~~Ge~~~~~i~~~~ayg~~~~~~~i~~~~ 132 (492)
+++||.|+|+|++++.||++|++|+.+ .|+.|.+|.++++++|+++|.+|++|++++|.|||++|||+++.
T Consensus 3 i~~gd~V~v~Y~g~~~dG~~fdss~~~-~P~~f~lG~g~vipG~eeaL~Gm~vGe~~~v~Ippe~aYGe~~~-------- 73 (196)
T 2kfw_A 3 VAKDLVVSLAYQVRTEDGVLVDESPVS-APLDYLHGHGSLISGLETALEGHEVGDKFDVAVGANDAYGQYDE-------- 73 (196)
T ss_dssp CCSSCEEEEEEEEEETTTEEEEECCTT-SCCEEESSSSSSCHHHHHHHSSSCTTCEEEEECSTTTTSSCCCT--------
T ss_pred CCCCCEEEEEEEEEECCCCEEEecCCC-CCEEEEECCCCcchHHHHHHcCCCCCCEEEEEeCcHHhcCCCCh--------
Confidence 679999999999998899999999864 89999999999999999999999999999999999999998763
Q ss_pred ceEEEEEEEEEeecccccccccceeeeeecC--cccCCCCCcceEEEEEEEEcCCCcEEeeecC
Q 011164 133 TLQFDVELLSWTSVKDICKDGGIIKKILKEG--EKWENPKDLDEVLVNYEARLEDGMVVGKADG 194 (492)
Q Consensus 133 ~l~~~vel~~~~~~~~~~~d~~~~k~i~~~g--~g~~~~~~~d~V~v~y~~~l~~g~~~~~~~~ 194 (492)
.+++.|....|.....+. .+..+..-...| .+.++...++.|+||||||||+.++.|+-+-
T Consensus 74 ~lV~~vp~~~f~~~~~~~-~G~~~~~~~~~G~~~~~V~~v~~~~V~vD~NHPLAGk~L~F~vev 136 (196)
T 2kfw_A 74 NLVQRVPKDVFMGVDELQ-VGMRFLAETDQGPVPVEITAVEDDHVVVDGNHMLAGQNLKFNVEV 136 (196)
T ss_dssp TTCEEECGGGCCCSSCCC-TTCEEEEEETTEEEEEEBCCCCSSSEEECCCCTTSCCCCEEEEEE
T ss_pred hhEEEEEHHHCCCccCcc-cCCEEEEECCCCcEEEEEEEEcCCEEEEeCCCCCCCCeEEEEEEE
Confidence 344444433332110111 111111100111 2234556678999999999999999987643
No 63
>2k8i_A SLYD, peptidyl-prolyl CIS-trans isomerase; ppiase, chaperone, rotamase; NMR {Escherichia coli}
Probab=99.73 E-value=7.9e-18 Score=148.48 Aligned_cols=134 Identities=19% Similarity=0.204 Sum_probs=96.8
Q ss_pred CCCCCEEEEEEEEEecCCCEEeecCCCCCcEEEEcCCCcccHhHHHHhccCcCccEEEEEecCCcccCCCCCCCCCCCCC
Q 011164 53 PENGDEVEVHYTGTLLDGTQFDSSRDRSTPFKFTLGQGNVIKGWDIGIKTMKKGENAVFTIPPELAYGESGSPPTIPPNA 132 (492)
Q Consensus 53 ~~~gd~V~v~Y~~~~~dg~~~~ss~~~~~p~~f~lg~~~~~~gle~~l~~m~~Ge~~~~~i~~~~ayg~~~~~~~i~~~~ 132 (492)
++.||.|+++|++++.||++|++|+.+ .|+.|.+|.+++++||+++|.+|++|++++|.|||++|||+++.
T Consensus 3 i~~gd~V~v~Y~g~~~dG~~fdss~~~-~P~~f~lG~g~vipG~eeaL~Gm~~Ge~~~v~ippe~aYG~~~~-------- 73 (171)
T 2k8i_A 3 VAKDLVVSLAYQVRTEDGVLVDESPVS-APLDYLHGHGSLISGLETALEGHEVGDKFDVAVGANDAYGQYDE-------- 73 (171)
T ss_dssp CCTTEEEEEEEEEEETTSCEEEECCSS-SCEEEETTSCSSCSHHHHHHTTCCTTCEEEEEEETTTSSCCCCT--------
T ss_pred CCCCCEEEEEEEEEECCCCEEeeccCC-cCEEEEECCCCcchHHHHHHcCCCCCCEEEEEECcHHhcCCCCh--------
Confidence 678999999999998899999999864 79999999999999999999999999999999999999998763
Q ss_pred ceEEEEEEEEEeecccccccccceeeeeecC--cccCCCCCcceEEEEEEEEcCCCcEEeeecCee
Q 011164 133 TLQFDVELLSWTSVKDICKDGGIIKKILKEG--EKWENPKDLDEVLVNYEARLEDGMVVGKADGVE 196 (492)
Q Consensus 133 ~l~~~vel~~~~~~~~~~~d~~~~k~i~~~g--~g~~~~~~~d~V~v~y~~~l~~g~~~~~~~~~~ 196 (492)
.+++.+....+.....+. .+..+..-...| .+..+...++.|++||||+||+.++.|+-+-..
T Consensus 74 ~~v~~v~~~~f~~~~~~~-~G~~~~~~~~~G~~~~~V~~v~~~~V~vD~NHPLAGk~L~F~vev~~ 138 (171)
T 2k8i_A 74 NLVQRVPKDVFMGVDELQ-VGMRFLAETDQGPVPVEITAVEDDHVVVDGNHMLAGQNLKFNVEVVA 138 (171)
T ss_dssp TSEEEEEGGGGTTSSCCC-TTCEEEEEETTEEEEEEEEEECSSEEEEESCCSSCCCEEEEEEEEEE
T ss_pred hhEEEeeHHHCCcccCcc-CCcEEEEECCCCcEEEEEEEEcCCEEEEeCCCCCCCCeEEEEEEEEE
Confidence 344444333221100000 111111000011 111233345899999999999999999865443
No 64
>3cgm_A SLYD, peptidyl-prolyl CIS-trans isomerase; chaperone function, two domain P rotamase; 2.41A {Thermus thermophilus} PDB: 3cgn_A 3luo_A*
Probab=99.68 E-value=3.1e-17 Score=142.89 Aligned_cols=129 Identities=20% Similarity=0.256 Sum_probs=96.0
Q ss_pred CCCCCEEEEEEEEEecCCCEEeecCCCCCcEEEEcCCCcccHhHHHHhccCcCccEEEEEecCCcccCCCCCCCCCCCCC
Q 011164 53 PENGDEVEVHYTGTLLDGTQFDSSRDRSTPFKFTLGQGNVIKGWDIGIKTMKKGENAVFTIPPELAYGESGSPPTIPPNA 132 (492)
Q Consensus 53 ~~~gd~V~v~Y~~~~~dg~~~~ss~~~~~p~~f~lg~~~~~~gle~~l~~m~~Ge~~~~~i~~~~ayg~~~~~~~i~~~~ 132 (492)
++.||.|++||+++ .||++|++|+ +.|.+|.+++++||+++|.+|++|++++|.|||++|||+++ .
T Consensus 3 i~~gd~V~v~Y~g~-~dG~~fdss~-----~~f~~G~g~vipG~e~aL~Gm~~Ge~~~v~ipp~~aYG~~~--------~ 68 (158)
T 3cgm_A 3 VGQDKVVTIRYTLQ-VEGEVLDQGE-----LSYLHGHRNLIPGLEEALEGREEGEAFQAHVPAEKAYGPHD--------P 68 (158)
T ss_dssp CCTTEEEEEEEEEE-ETTEEEEEEE-----EEEETTSSSSCHHHHHHHTTCBTTCEEEEEECGGGTTCCCC--------G
T ss_pred CCCCCEEEEEEEEE-ECCEEEEeeE-----EEEEECCCCcChHHHHHHcCCCCCCEEEEEECcHHHcCCCC--------c
Confidence 67899999999999 8999999986 89999999999999999999999999999999999999876 4
Q ss_pred ceEEEEEEEEEeecccccccccceeeeeecC---cccCCCCCcceEEEEEEEEcCCCcEEeeecCee
Q 011164 133 TLQFDVELLSWTSVKDICKDGGIIKKILKEG---EKWENPKDLDEVLVNYEARLEDGMVVGKADGVE 196 (492)
Q Consensus 133 ~l~~~vel~~~~~~~~~~~d~~~~k~i~~~g---~g~~~~~~~d~V~v~y~~~l~~g~~~~~~~~~~ 196 (492)
.+++.+.+..+.....+ ..+..+..-...| .+..+-..++.|++|+||+||+.++.|+-+-+.
T Consensus 69 ~lv~~v~~~~f~~~~~~-~~G~~~~~~~~~G~~~~~~V~~v~~~~v~vD~NHPLAGk~L~F~vev~~ 134 (158)
T 3cgm_A 69 EGVQVVPLSAFPEDAEV-VPGAQFYAQDMEGNPMPLTVVAVEGEEVTVDFNHPLAGKDLDFQVEVVK 134 (158)
T ss_dssp GGEEEEEGGGSCTTSCC-CTTCEEEEEETTTEEEEEEEEEEETTEEEEECSCTTTTCCEEEEEEEEE
T ss_pred ceEEEEEHHHCCCCCCC-ccCCEEEEECCCCCEEEEEEEEECCCEEEEeCCccccCCEEEEEEEEEE
Confidence 56666665544311111 1111111101111 122334456899999999999999999865443
No 65
>4dt4_A FKBP-type 16 kDa peptidyl-prolyl CIS-trans isomer; FKBP domain, IF domain, chaperone, peptidyl-prolyl isomerase isomerase; 1.35A {Escherichia coli}
Probab=99.62 E-value=1.3e-15 Score=133.43 Aligned_cols=72 Identities=21% Similarity=0.378 Sum_probs=66.9
Q ss_pred CCCCCCEEEEEEEEEEcCCcEEEEcCCCCCcccEEEEcCCcccchhHHHHHhccCcCcEEEEEECCCCccCCCc
Q 011164 285 RPNEGAVVKVKLIGKLQDGTVFVKKGHSEEEQLFEFKTDEEQVIDGLDRAVITMKKNEVALLTIAPEYAFGSAE 358 (492)
Q Consensus 285 ~p~~g~~V~v~y~~~~~~g~~~d~~~~~~~~~~~~~~lg~~~~~~gle~~l~~m~~Ge~~~i~ip~~~~yg~~~ 358 (492)
.+..|+.|++||++++.||++||+++ ..+.|+.|.+|.+++++||+++|.+|++||++.|.|||++|||+.+
T Consensus 24 ~i~~gd~V~v~Y~g~l~dG~vfDss~--~~~~P~~f~lG~g~vipG~eeaL~gm~~Ge~~~v~Ipp~~AYG~~~ 95 (169)
T 4dt4_A 24 SVQSNSAVLVHFTLKLDDGTTAESTR--NNGKPALFRLGDASLSEGLEQHLLGLKVGDKTTFSLEPDAAFGVPS 95 (169)
T ss_dssp SCCTTCEEEEEEEEEETTSCEEEEHH--HHTSCEEEETTSSSSCHHHHHHHTTCCTTCEEEEEECGGGTTCCCC
T ss_pred cCCCCCEEEEEEEEEECCCCEEEecC--CCCCCEEEEECCCCccHHHHHHHcCCCCCCEEEEEEChHHhcCCCC
Confidence 68899999999999999999999985 2358999999999999999999999999999999999999999864
No 66
>3pr9_A FKBP-type peptidyl-prolyl CIS-trans isomerase; FKBP protein, chaperone; 1.95A {Methanocaldococcus jannaschii} SCOP: d.26.1.0 PDB: 3pra_A
Probab=99.60 E-value=3.7e-15 Score=129.36 Aligned_cols=73 Identities=29% Similarity=0.439 Sum_probs=65.2
Q ss_pred CCCCCEEEEEEEEEEcCCcEEEEcCCC-----------CCcccEEEEcCCcccchhHHHHHhccCcCcEEEEEECCCCcc
Q 011164 286 PNEGAVVKVKLIGKLQDGTVFVKKGHS-----------EEEQLFEFKTDEEQVIDGLDRAVITMKKNEVALLTIAPEYAF 354 (492)
Q Consensus 286 p~~g~~V~v~y~~~~~~g~~~d~~~~~-----------~~~~~~~~~lg~~~~~~gle~~l~~m~~Ge~~~i~ip~~~~y 354 (492)
.+.||.|++||++++ ||++||+++.. ....|+.|.+|.+++++||+++|.+|++||+++|.|||++||
T Consensus 2 i~~Gd~V~v~Y~g~l-dG~vfDss~~~~a~~~g~~~~~~~~~P~~f~vG~g~vi~G~eeaL~gm~~Ge~~~v~Ipp~~aY 80 (157)
T 3pr9_A 2 VEKGKMVKISYDGYV-DGKLFDTTNEELAKKEGIYNPAMIYGPVAIFAGEGQVLPGLDEAILEMDVGEEREVVLPPEKAF 80 (157)
T ss_dssp CCTTCEEEEEEEEEE-TTEEEEESCHHHHHHHTCCCTTSCCSCEEEETTSSSSCHHHHHHHHHCCTTCEEEEEECGGGTT
T ss_pred CCCCCEEEEEEEEEE-CCEEEEeccccccccccccccccCCCCEEEEECCCcHHHHHHHHHcCCCCCCEEEEEECcHHhc
Confidence 568999999999999 99999998531 113799999999999999999999999999999999999999
Q ss_pred CCCcc
Q 011164 355 GSAES 359 (492)
Q Consensus 355 g~~~~ 359 (492)
|..+.
T Consensus 81 G~~~~ 85 (157)
T 3pr9_A 81 GKRDP 85 (157)
T ss_dssp CCCCG
T ss_pred CCCCh
Confidence 98754
No 67
>2kr7_A FKBP-type peptidyl-prolyl CIS-trans isomerase SLY; protein, rotamase; NMR {Helicobacter pylori}
Probab=99.57 E-value=1.4e-14 Score=125.41 Aligned_cols=72 Identities=25% Similarity=0.323 Sum_probs=66.9
Q ss_pred CCCCCCCEEEEEEEEEEc-CCcEEEEcCCCCCcccEEEEcCCcccchhHHHHHhccCcCcEEEEEECCCCccCCCc
Q 011164 284 ERPNEGAVVKVKLIGKLQ-DGTVFVKKGHSEEEQLFEFKTDEEQVIDGLDRAVITMKKNEVALLTIAPEYAFGSAE 358 (492)
Q Consensus 284 ~~p~~g~~V~v~y~~~~~-~g~~~d~~~~~~~~~~~~~~lg~~~~~~gle~~l~~m~~Ge~~~i~ip~~~~yg~~~ 358 (492)
..+..|+.|++||++++. +|++||+++ ...|+.|.+|.+++++||+.+|.+|++|+++.|.|||+.|||..+
T Consensus 5 ~~i~~gd~V~v~Y~g~~~~dG~~fdss~---~~~p~~f~~G~g~vipg~e~aL~gm~~Ge~~~v~ipp~~aYG~~~ 77 (151)
T 2kr7_A 5 DLESIKQAALIEYEVREQGSSIVLDSNI---SKEPLEFIIGTNQIIAGLEKAVLKAQIGEWEEVVIAPEEAYGVYE 77 (151)
T ss_dssp CCTTSCCEEEEEEEEEESSCSCEEEEST---TTCCEEEETTCCCSCHHHHHHHTTCCBTCEEEEEECGGGTTCSSC
T ss_pred cCCCCCCEEEEEEEEEECCCCCEEEeCC---CCcCEEEEECCCCccHHHHHHHcCCCCCCEEEEEEecHHHcCCCC
Confidence 567899999999999998 999999985 357999999999999999999999999999999999999999864
No 68
>1hxv_A Trigger factor; FKBP fold, ppiase, chaperone; NMR {Mycoplasma genitalium} SCOP: d.26.1.1
Probab=99.57 E-value=2.7e-15 Score=123.31 Aligned_cols=85 Identities=22% Similarity=0.438 Sum_probs=74.9
Q ss_pred CCCCCCCEEEEEEEEEecCCCEEeecCCCCCcEEEEcCCCcccHhHHHHhccCcCccEEEEEecCCcccCCCCCCCCCCC
Q 011164 51 DTPENGDEVEVHYTGTLLDGTQFDSSRDRSTPFKFTLGQGNVIKGWDIGIKTMKKGENAVFTIPPELAYGESGSPPTIPP 130 (492)
Q Consensus 51 ~~~~~gd~V~v~Y~~~~~dg~~~~ss~~~~~p~~f~lg~~~~~~gle~~l~~m~~Ge~~~~~i~~~~ayg~~~~~~~i~~ 130 (492)
..++.||.|.++|++++ ||++|+++. +.|+.|.+|.+++++||+++|.+|++|++++|.|++...||..+. +
T Consensus 28 ~~~~~gD~V~v~Y~g~~-dG~~fdss~--~~p~~f~lG~g~vi~G~ee~L~Gmk~Ge~~~v~i~fP~~Yg~~~~-----~ 99 (113)
T 1hxv_A 28 KKLANGDIAIIDFTGIV-DNKKLASAS--AQNYELTIGSNSFIKGFETGLIAMKVNQKKTLALTFPSDYHVKEL-----Q 99 (113)
T ss_dssp -CCCSSEEEEEEEEEEE-TTEECSTTC--CSEEEEEETSSCSCTTHHHHHHTSCSSEEEEECCCCCTTSSSSGG-----G
T ss_pred CCCCCCCEEEEEEEEEE-CCEEcccCC--ccCEEEEECCCChhHHHHHHHCCCCCCCEEEEEEeCchhhCcCCC-----C
Confidence 57899999999999998 999999996 489999999999999999999999999999999973333997653 5
Q ss_pred CCceEEEEEEEEE
Q 011164 131 NATLQFDVELLSW 143 (492)
Q Consensus 131 ~~~l~~~vel~~~ 143 (492)
+++++|+|+|+++
T Consensus 100 g~~l~F~V~l~~V 112 (113)
T 1hxv_A 100 SKPVTFEVVLKAI 112 (113)
T ss_dssp SCCCEEEEEECCB
T ss_pred CCEEEEEEEEEEE
Confidence 7999999999765
No 69
>1hxv_A Trigger factor; FKBP fold, ppiase, chaperone; NMR {Mycoplasma genitalium} SCOP: d.26.1.1
Probab=99.57 E-value=5.4e-15 Score=121.55 Aligned_cols=85 Identities=21% Similarity=0.411 Sum_probs=74.2
Q ss_pred CCCCCCCEEEEEEEEEEcCCcEEEEcCCCCCcccEEEEcCCcccchhHHHHHhccCcCcEEEEEEC-CCCccCCCccccc
Q 011164 284 ERPNEGAVVKVKLIGKLQDGTVFVKKGHSEEEQLFEFKTDEEQVIDGLDRAVITMKKNEVALLTIA-PEYAFGSAESQQE 362 (492)
Q Consensus 284 ~~p~~g~~V~v~y~~~~~~g~~~d~~~~~~~~~~~~~~lg~~~~~~gle~~l~~m~~Ge~~~i~ip-~~~~yg~~~~~~~ 362 (492)
..+..||.|++||++++ ||++||++ ...|+.|.+|.+++++||+.+|.+|++||++.|.|| |.. ||..+
T Consensus 28 ~~~~~gD~V~v~Y~g~~-dG~~fdss----~~~p~~f~lG~g~vi~G~ee~L~Gmk~Ge~~~v~i~fP~~-Yg~~~---- 97 (113)
T 1hxv_A 28 KKLANGDIAIIDFTGIV-DNKKLASA----SAQNYELTIGSNSFIKGFETGLIAMKVNQKKTLALTFPSD-YHVKE---- 97 (113)
T ss_dssp -CCCSSEEEEEEEEEEE-TTEECSTT----CCSEEEEEETSSCSCTTHHHHHHTSCSSEEEEECCCCCTT-SSSSG----
T ss_pred CCCCCCCEEEEEEEEEE-CCEEcccC----CccCEEEEECCCChhHHHHHHHCCCCCCCEEEEEEeCchh-hCcCC----
Confidence 57899999999999999 99999876 367999999999999999999999999999999996 443 88654
Q ss_pred cccCCCCccEEEEEEEeeee
Q 011164 363 LAVVPPNSTVHYEVELVSFE 382 (492)
Q Consensus 363 ~~~ip~~~~l~~~v~l~~~~ 382 (492)
.++++++|+|+|+++.
T Consensus 98 ----~~g~~l~F~V~l~~Vk 113 (113)
T 1hxv_A 98 ----LQSKPVTFEVVLKAIK 113 (113)
T ss_dssp ----GGSCCCEEEEEECCBC
T ss_pred ----CCCCEEEEEEEEEEEC
Confidence 2478999999999873
No 70
>2k8i_A SLYD, peptidyl-prolyl CIS-trans isomerase; ppiase, chaperone, rotamase; NMR {Escherichia coli}
Probab=99.53 E-value=5e-14 Score=124.16 Aligned_cols=70 Identities=14% Similarity=0.238 Sum_probs=65.2
Q ss_pred CCCCCEEEEEEEEEEcCCcEEEEcCCCCCcccEEEEcCCcccchhHHHHHhccCcCcEEEEEECCCCccCCCc
Q 011164 286 PNEGAVVKVKLIGKLQDGTVFVKKGHSEEEQLFEFKTDEEQVIDGLDRAVITMKKNEVALLTIAPEYAFGSAE 358 (492)
Q Consensus 286 p~~g~~V~v~y~~~~~~g~~~d~~~~~~~~~~~~~~lg~~~~~~gle~~l~~m~~Ge~~~i~ip~~~~yg~~~ 358 (492)
+..|+.|+++|++++.+|++|++++ ...|+.|.+|.+++++||+.+|.+|++||++.|.|||+.|||..+
T Consensus 3 i~~gd~V~v~Y~g~~~dG~~fdss~---~~~P~~f~lG~g~vipG~eeaL~Gm~~Ge~~~v~ippe~aYG~~~ 72 (171)
T 2k8i_A 3 VAKDLVVSLAYQVRTEDGVLVDESP---VSAPLDYLHGHGSLISGLETALEGHEVGDKFDVAVGANDAYGQYD 72 (171)
T ss_dssp CCTTEEEEEEEEEEETTSCEEEECC---SSSCEEEETTSCSSCSHHHHHHTTCCTTCEEEEEEETTTSSCCCC
T ss_pred CCCCCEEEEEEEEEECCCCEEeecc---CCcCEEEEECCCCcchHHHHHHcCCCCCCEEEEEECcHHhcCCCC
Confidence 6789999999999998999999985 347999999999999999999999999999999999999999874
No 71
>3prb_A FKBP-type peptidyl-prolyl CIS-trans isomerase; chaperone; 2.20A {Methanocaldococcus jannaschii} PDB: 3prd_A
Probab=99.53 E-value=3e-14 Score=130.95 Aligned_cols=98 Identities=23% Similarity=0.394 Sum_probs=81.2
Q ss_pred CCCCCEEEEEEEEEEcCCcEEEEcCCC-----------CCcccEEEEcCCcccchhHHHHHhccCcCcEEEEEECCCCcc
Q 011164 286 PNEGAVVKVKLIGKLQDGTVFVKKGHS-----------EEEQLFEFKTDEEQVIDGLDRAVITMKKNEVALLTIAPEYAF 354 (492)
Q Consensus 286 p~~g~~V~v~y~~~~~~g~~~d~~~~~-----------~~~~~~~~~lg~~~~~~gle~~l~~m~~Ge~~~i~ip~~~~y 354 (492)
...||.|++||++++ ||++||+++.. ....|+.|.+|.+++++||+.+|.+|++|+++.|.|||++||
T Consensus 2 i~~Gd~V~v~Y~g~l-dG~vfDss~~~~A~e~gi~~~~~~~~P~~f~lG~g~vIpG~eeaL~Gm~vGek~~v~Ippe~AY 80 (231)
T 3prb_A 2 VEKGKMVKISYDGYV-DGKLFDTTNEELAKKEGIYNPAMIYGPVAIFAGEGQVLPGLDEAILEMDVGEEREVVLPPEKAF 80 (231)
T ss_dssp CCTTCEEEEEEEEEE-TTEEEEESCHHHHHHTTCCCTTSCCSCEEEETTSSSSCHHHHHHHHTCCTTCEEEEEECGGGTT
T ss_pred CCCCCEEEEEEEEEE-CCEEEEeccchhcccccccccccCCCCEEEEeCCCcHHHHHHHHHcCCCCCCEEEEEeCcHHhc
Confidence 468999999999999 99999998531 113799999999999999999999999999999999999999
Q ss_pred CCCcccc-----------------------------------------ccccCCCCccEEEEEEEeeeeec
Q 011164 355 GSAESQQ-----------------------------------------ELAVVPPNSTVHYEVELVSFEKE 384 (492)
Q Consensus 355 g~~~~~~-----------------------------------------~~~~ip~~~~l~~~v~l~~~~~~ 384 (492)
|..+... +..+-=+|.+|.|+|+|+++.+.
T Consensus 81 Ge~~~~lv~~vp~~~f~~~~~~~~vG~~~~~~~~~g~V~~v~~~~V~vD~NHPLAGk~L~F~vev~~v~ea 151 (231)
T 3prb_A 81 GKRDPSKIKLIPLSEFTKRGIKPIKGLTITIDGIPGKIVSINSGRVLVDFNHELAGKEVKYRIKIEEVVDD 151 (231)
T ss_dssp CCCCGGGEEEEETHHHHTTTCCCCTTCEEEETTEEEEEEEEETTEEEEECSCTTTTCCEEEEEEEEEECCS
T ss_pred CCCChHHEEecCHHHCCcccCCCCCCcEEEecCCCEEEEEEcCCEEEEeCCCccCCCEEEEEEEEEEEecC
Confidence 9865321 00111278999999999999854
No 72
>2kfw_A FKBP-type peptidyl-prolyl CIS-trans isomerase SLYD; protein, cobalt, copper, cytoplasm, metal- binding, nickel, rotamase, zinc; NMR {Escherichia coli}
Probab=99.53 E-value=3.9e-14 Score=127.30 Aligned_cols=70 Identities=14% Similarity=0.238 Sum_probs=65.3
Q ss_pred CCCCCEEEEEEEEEEcCCcEEEEcCCCCCcccEEEEcCCcccchhHHHHHhccCcCcEEEEEECCCCccCCCc
Q 011164 286 PNEGAVVKVKLIGKLQDGTVFVKKGHSEEEQLFEFKTDEEQVIDGLDRAVITMKKNEVALLTIAPEYAFGSAE 358 (492)
Q Consensus 286 p~~g~~V~v~y~~~~~~g~~~d~~~~~~~~~~~~~~lg~~~~~~gle~~l~~m~~Ge~~~i~ip~~~~yg~~~ 358 (492)
++.++.|+|||++++.+|++||+++ ...|+.|.+|.+++++||+++|.+|++|++++|.|||+.|||+.+
T Consensus 3 i~~gd~V~v~Y~g~~~dG~~fdss~---~~~P~~f~lG~g~vipG~eeaL~Gm~vGe~~~v~Ippe~aYGe~~ 72 (196)
T 2kfw_A 3 VAKDLVVSLAYQVRTEDGVLVDESP---VSAPLDYLHGHGSLISGLETALEGHEVGDKFDVAVGANDAYGQYD 72 (196)
T ss_dssp CCSSCEEEEEEEEEETTTEEEEECC---TTSCCEEESSSSSSCHHHHHHHSSSCTTCEEEEECSTTTTSSCCC
T ss_pred CCCCCEEEEEEEEEECCCCEEEecC---CCCCEEEEECCCCcchHHHHHHcCCCCCCEEEEEeCcHHhcCCCC
Confidence 6789999999999998999999985 347999999999999999999999999999999999999999764
No 73
>1ix5_A FKBP; ppiase, isomerase; NMR {Methanothermococcusthermolithotrophicus} SCOP: d.26.1.1
Probab=99.52 E-value=7.4e-15 Score=127.26 Aligned_cols=74 Identities=32% Similarity=0.533 Sum_probs=66.1
Q ss_pred CCCCCEEEEEEEEEEcCCcEEEEcCCC-----------CCcccEEEEcCCcccchhHHHHHhccCcCcEEEEEECCCCcc
Q 011164 286 PNEGAVVKVKLIGKLQDGTVFVKKGHS-----------EEEQLFEFKTDEEQVIDGLDRAVITMKKNEVALLTIAPEYAF 354 (492)
Q Consensus 286 p~~g~~V~v~y~~~~~~g~~~d~~~~~-----------~~~~~~~~~lg~~~~~~gle~~l~~m~~Ge~~~i~ip~~~~y 354 (492)
+..||.|++||++++.+|++||+++.. ....|+.|.+|.+++++||+.+|.+|++||++.|.|||++||
T Consensus 2 i~~gd~V~v~Y~g~~~dG~~fdss~~~~a~~~g~~~~~~~~~P~~f~~G~g~vi~G~eeaL~gm~~Ge~~~v~ipp~~aY 81 (151)
T 1ix5_A 2 VDKGVKIKVDYIGKLESGDVFDTSIEEVAKEAGIYAPDREYEPLEFVVGEGQLIQGFEEAVLDMEVGDEKTVKIPAEKAY 81 (151)
T ss_dssp CCTTCEEEECCEECCTTSCCCEESCHHHHHHHTCCCSSCCCCCEEEETTTTCSCHHHHHHHHTCCTTCCCEEEECTTTSS
T ss_pred CCCCCEEEEEEEEEECCCCEEEecchhhcccccccccccCCCCEEEEECCCChhHHHHHHHcCCCCCCEEEEEECcHHHC
Confidence 678999999999999999999998520 124699999999999999999999999999999999999999
Q ss_pred CCCcc
Q 011164 355 GSAES 359 (492)
Q Consensus 355 g~~~~ 359 (492)
|..+.
T Consensus 82 G~~~~ 86 (151)
T 1ix5_A 82 GNRNE 86 (151)
T ss_dssp CSCCS
T ss_pred CCCCc
Confidence 98654
No 74
>3cgm_A SLYD, peptidyl-prolyl CIS-trans isomerase; chaperone function, two domain P rotamase; 2.41A {Thermus thermophilus} PDB: 3cgn_A 3luo_A*
Probab=99.44 E-value=3.5e-13 Score=117.21 Aligned_cols=65 Identities=18% Similarity=0.338 Sum_probs=60.9
Q ss_pred CCCCCEEEEEEEEEEcCCcEEEEcCCCCCcccEEEEcCCcccchhHHHHHhccCcCcEEEEEECCCCccCCCc
Q 011164 286 PNEGAVVKVKLIGKLQDGTVFVKKGHSEEEQLFEFKTDEEQVIDGLDRAVITMKKNEVALLTIAPEYAFGSAE 358 (492)
Q Consensus 286 p~~g~~V~v~y~~~~~~g~~~d~~~~~~~~~~~~~~lg~~~~~~gle~~l~~m~~Ge~~~i~ip~~~~yg~~~ 358 (492)
+..|+.|++||+++ .||++||+++ +.|.+|.+++++||+.+|.+|++||++.|.|||+.|||..+
T Consensus 3 i~~gd~V~v~Y~g~-~dG~~fdss~-------~~f~~G~g~vipG~e~aL~Gm~~Ge~~~v~ipp~~aYG~~~ 67 (158)
T 3cgm_A 3 VGQDKVVTIRYTLQ-VEGEVLDQGE-------LSYLHGHRNLIPGLEEALEGREEGEAFQAHVPAEKAYGPHD 67 (158)
T ss_dssp CCTTEEEEEEEEEE-ETTEEEEEEE-------EEEETTSSSSCHHHHHHHTTCBTTCEEEEEECGGGTTCCCC
T ss_pred CCCCCEEEEEEEEE-ECCEEEEeeE-------EEEEECCCCcChHHHHHHcCCCCCCEEEEEECcHHHcCCCC
Confidence 56899999999999 8999999873 89999999999999999999999999999999999999764
No 75
>3rkv_A Putative peptidylprolyl isomerase; structural genomics, APC102156, PSI-biology, midwest center structural genomics, MCSG; 2.41A {Caenorhabditis elegans}
Probab=99.38 E-value=3.7e-13 Score=118.12 Aligned_cols=99 Identities=19% Similarity=0.313 Sum_probs=85.2
Q ss_pred hHHHHHHHHHHHHhhhHHHHcccHHHHHHHHHHHHHHhccc---CCCChHHHHHHHHHHHHhHhHHHHHHHHhcCHHHHH
Q 011164 392 TEEKIEAAGKKKEQGNTLFKAGKYARASKRYEKAVKYIEYD---TSFGDEEKKQAKALKVACNLNNAACKLKLKDYKQAE 468 (492)
Q Consensus 392 ~~e~l~~a~~~K~~Gn~~fk~~~~~~A~~~Y~~al~~l~~~---~~~~~~~~~~~~~~~~~l~~N~a~~~lk~~~~~~ai 468 (492)
.+++++.+..+++.|+.+|++|+|.+|+..|++|++++... ....+++...+.+....+|+|+|.||+++++|.+|+
T Consensus 4 ~~e~~~~a~~~~~~G~~~~~~~~~~~A~~~y~~al~~~~~~~~~~~~~~~~~~~~~~~~~~~~~nla~~~~~~~~~~~A~ 83 (162)
T 3rkv_A 4 EDDKLKSVEALRQKGNELFVQKDYKEAIDAYRDALTRLDTLILREKPGEPEWVELDRKNIPLYANMSQCYLNIGDLHEAE 83 (162)
T ss_dssp ----CHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHHHTSCTTSHHHHHHHHTHHHHHHHHHHHHHHHTCHHHHH
T ss_pred hHHHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHhcccCCCCHHHHHHHHHHHHHHHHHHHHHHHhcCcHHHHH
Confidence 45788999999999999999999999999999999986542 233445667778899999999999999999999999
Q ss_pred HHHHHHHhcCCCCccceeeeec
Q 011164 469 KLCTKVQQQKKFLLLPIFNIYA 490 (492)
Q Consensus 469 ~~~~~al~~dp~n~KA~~r~~~ 490 (492)
.+|++||+++|++.+|+||+..
T Consensus 84 ~~~~~al~~~p~~~~a~~~~g~ 105 (162)
T 3rkv_A 84 ETSSEVLKREETNEKALFRRAK 105 (162)
T ss_dssp HHHHHHHHHSTTCHHHHHHHHH
T ss_pred HHHHHHHhcCCcchHHHHHHHH
Confidence 9999999999999999998754
No 76
>2hr2_A Hypothetical protein; alpha-alpha superhelix fold, structural genomics, joint CENT structural genomics, JCSG, protein structure initiative; 2.54A {Chlorobium tepidum} SCOP: a.118.8.8
Probab=99.31 E-value=1.8e-12 Score=112.59 Aligned_cols=100 Identities=13% Similarity=0.088 Sum_probs=81.2
Q ss_pred CChHHHHHHHHHHHHhhhHHHHcccHHHHHHHHHHHHHHhcccCCCChHHHHHHHHHHHHhHhHHHHHHHHhcCHHHHHH
Q 011164 390 MNTEEKIEAAGKKKEQGNTLFKAGKYARASKRYEKAVKYIEYDTSFGDEEKKQAKALKVACNLNNAACKLKLKDYKQAEK 469 (492)
Q Consensus 390 ~~~~e~l~~a~~~K~~Gn~~fk~~~~~~A~~~Y~~al~~l~~~~~~~~~~~~~~~~~~~~l~~N~a~~~lk~~~~~~ai~ 469 (492)
|.+-.....+..++..||.+|+.|+|.+|+.+|++||++....+... .....+....+|+|+|.|+.++++|++|+.
T Consensus 2 ~~~~~~~~~a~~~~~~G~~l~~~g~~eeAi~~Y~kAL~l~p~~~~~~---a~~~~~~~a~a~~n~g~al~~Lgr~~eAl~ 78 (159)
T 2hr2_A 2 MKPLKEVVGAYLALSDAQRQLVAGEYDEAAANCRRAMEISHTMPPEE---AFDHAGFDAFCHAGLAEALAGLRSFDEALH 78 (159)
T ss_dssp -CHHHHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHTTSCTTS---CCCHHHHHHHHHHHHHHHHHHTTCHHHHHH
T ss_pred CccHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHhhCCCCcchh---hhhhccchHHHHHHHHHHHHHCCCHHHHHH
Confidence 33434477899999999999999999999999999999876532211 011234456699999999999999999999
Q ss_pred HHHHHHhc-------CCCCccce----eeeeccC
Q 011164 470 LCTKVQQQ-------KKFLLLPI----FNIYARL 492 (492)
Q Consensus 470 ~~~~al~~-------dp~n~KA~----~r~~~~l 492 (492)
+|++||++ +|++.+|| ||+..+|
T Consensus 79 ~~~kAL~l~n~~~e~~pd~~~A~~~~~~~rG~aL 112 (159)
T 2hr2_A 79 SADKALHYFNRRGELNQDEGKLWISAVYSRALAL 112 (159)
T ss_dssp HHHHHHHHHHHHCCTTSTHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHhhhccccCCCchHHHHHHHHHhHHHHH
Confidence 99999999 99999999 9986553
No 77
>4gco_A Protein STI-1; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, tetratricopeptide repeat domain; 1.60A {Caenorhabditis elegans}
Probab=99.22 E-value=5.7e-12 Score=106.05 Aligned_cols=78 Identities=28% Similarity=0.387 Sum_probs=63.3
Q ss_pred HHHHHHHHhhhHHHHcccHHHHHHHHHHHHHHhcccCCCChHHHHHHHHHHHHhHhHHHHHHHHhcCHHHHHHHHHHHHh
Q 011164 397 EAAGKKKEQGNTLFKAGKYARASKRYEKAVKYIEYDTSFGDEEKKQAKALKVACNLNNAACKLKLKDYKQAEKLCTKVQQ 476 (492)
Q Consensus 397 ~~a~~~K~~Gn~~fk~~~~~~A~~~Y~~al~~l~~~~~~~~~~~~~~~~~~~~l~~N~a~~~lk~~~~~~ai~~~~~al~ 476 (492)
+.+..++++||.+|++|+|.+|+..|++|++.-. ....+|.|+|.|++++++|++|+.+|++||+
T Consensus 11 ~~a~~~~~~G~~~~~~g~~~~A~~~~~~al~~~p---------------~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~ 75 (126)
T 4gco_A 11 ELAQEEKNKGNEYFKKGDYPTAMRHYNEAVKRDP---------------ENAILYSNRAACLTKLMEFQRALDDCDTCIR 75 (126)
T ss_dssp HHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCT---------------TCHHHHHHHHHHHHHTTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCC---------------CCHHHHHHHhhHHHhhccHHHHHHHHHHHHH
Confidence 4688899999999999999999999999998732 2356777788888888888888888888888
Q ss_pred cCCCCccceeeee
Q 011164 477 QKKFLLLPIFNIY 489 (492)
Q Consensus 477 ~dp~n~KA~~r~~ 489 (492)
++|++.++++++.
T Consensus 76 ~~p~~~~a~~~lg 88 (126)
T 4gco_A 76 LDSKFIKGYIRKA 88 (126)
T ss_dssp HCTTCHHHHHHHH
T ss_pred hhhhhhHHHHHHH
Confidence 8877777777654
No 78
>2fbn_A 70 kDa peptidylprolyl isomerase, putative; sulfur SAD, PFL2275C, TPR-containing domain, structural genomics; 1.63A {Plasmodium falciparum} SCOP: a.118.8.1
Probab=99.20 E-value=4.7e-11 Score=108.23 Aligned_cols=120 Identities=27% Similarity=0.384 Sum_probs=93.8
Q ss_pred cEEEEEEEeeeeecccCCCCChHHHHHHHHHHHHhhhHHHHcccHHHHHHHHHHHHHHhcccCCCChH-HHHHHHHHHHH
Q 011164 371 TVHYEVELVSFEKEKESWDMNTEEKIEAAGKKKEQGNTLFKAGKYARASKRYEKAVKYIEYDTSFGDE-EKKQAKALKVA 449 (492)
Q Consensus 371 ~l~~~v~l~~~~~~~~~~~~~~~e~l~~a~~~K~~Gn~~fk~~~~~~A~~~Y~~al~~l~~~~~~~~~-~~~~~~~~~~~ 449 (492)
.......+..+++..+.|.++.++..+.+..++..|+.++++|+|.+|+..|++++++.......... .......+...
T Consensus 10 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~~~~~ 89 (198)
T 2fbn_A 10 HSSGRENLYFQGAKKSIYDYTDEEKVQSAFDIKEEGNEFFKKNEINEAIVKYKEALDFFIHTEEWDDQILLDKKKNIEIS 89 (198)
T ss_dssp ------------CCCSGGGCCHHHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHTTTTCTTCCCHHHHHHHHHHHHH
T ss_pred hhhhhhhhhhccccCchhhCCHHHHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHhcccccchhhHHHHHHHHHHH
Confidence 34455667788899999999999999999999999999999999999999999999986654332222 23334556678
Q ss_pred hHhHHHHHHHHhcCHHHHHHHHHHHHhcCCCCccceeeeec
Q 011164 450 CNLNNAACKLKLKDYKQAEKLCTKVQQQKKFLLLPIFNIYA 490 (492)
Q Consensus 450 l~~N~a~~~lk~~~~~~ai~~~~~al~~dp~n~KA~~r~~~ 490 (492)
++.|+|.|++++++|++|+.+|+++++++|++.++++++..
T Consensus 90 ~~~~la~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~lg~ 130 (198)
T 2fbn_A 90 CNLNLATCYNKNKDYPKAIDHASKVLKIDKNNVKALYKLGV 130 (198)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHHHHHHHSTTCHHHHHHHHH
T ss_pred HHHHHHHHHHHhcCHHHHHHHHHHHHHhCcccHHHHHHHHH
Confidence 99999999999999999999999999999999999987653
No 79
>1w26_A Trigger factor, TF; chaperone, protein folding, ribosome associated protein, nascent chain, cell division, isomerase; 2.7A {Escherichia coli} SCOP: a.223.1.1 d.241.2.1 d.26.1.1 PDB: 2vrh_A 1w2b_5
Probab=99.20 E-value=2.8e-11 Score=123.07 Aligned_cols=101 Identities=25% Similarity=0.445 Sum_probs=88.9
Q ss_pred CCCCCCCEEEEEEEEEecCCCEEeecCCCCCcEEEEcCCCcccHhHHHHhccCcCccEEEEEecCCcccCCCCCCCCCCC
Q 011164 51 DTPENGDEVEVHYTGTLLDGTQFDSSRDRSTPFKFTLGQGNVIKGWDIGIKTMKKGENAVFTIPPELAYGESGSPPTIPP 130 (492)
Q Consensus 51 ~~~~~gd~V~v~Y~~~~~dg~~~~ss~~~~~p~~f~lg~~~~~~gle~~l~~m~~Ge~~~~~i~~~~ayg~~~~~~~i~~ 130 (492)
..++.||.|.+||+++. ||+.|+++. +.|+.|.+|.+++++||+.+|.||++|+++.|.+|+..+||..+. +
T Consensus 156 ~~~~~gD~V~i~y~g~~-dG~~fd~~~--~~~~~~~lG~g~~ipgfee~L~G~k~Ge~~~v~v~~~~~yg~~~l-----a 227 (432)
T 1w26_A 156 GAVEAEDRVTIDFTGSV-DGEEFEGGK--ASDFVLAMGQGRMIPGFEDGIKGHKAGEEFTIDVTFPEEYHAENL-----K 227 (432)
T ss_dssp SCCCTTCEEEECEEEES-SSCBCSSCC--CSSEEEETTSCCSCTTHHHHSSSCCSSCEEEEEEECCTTCSCTTT-----S
T ss_pred CCCCCCCEEEEEEEEee-CCeEccCCC--ccceEEEeCCCCcchHHHHHhCCCCCCCEEEEEECCchhhCCCCC-----C
Confidence 56899999999999995 999999987 489999999999999999999999999999999999999997663 5
Q ss_pred CCceEEEEEEEEEeecccccccccceeee
Q 011164 131 NATLQFDVELLSWTSVKDICKDGGIIKKI 159 (492)
Q Consensus 131 ~~~l~~~vel~~~~~~~~~~~d~~~~k~i 159 (492)
+++++|.|++.++.....+..|..+++.+
T Consensus 228 g~~~~F~V~v~~v~~~~lpeldDEfak~~ 256 (432)
T 1w26_A 228 GKAAKFAINLKKVEERELPELTAEFIKRF 256 (432)
T ss_dssp SCEEEEEEECCEECCEECCCCSHHHHTTT
T ss_pred CceEEEEEEEEEEeccCCCCcchHHHHHh
Confidence 68999999999998766666666666543
No 80
>4gcn_A Protein STI-1; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, tetratricopeptide repeat domain; HET: PGE; 1.85A {Caenorhabditis elegans}
Probab=99.10 E-value=3.6e-11 Score=101.19 Aligned_cols=76 Identities=21% Similarity=0.314 Sum_probs=67.5
Q ss_pred HHHHHHHHHHhhhHHHHcccHHHHHHHHHHHHHHhcccCCCChHHHHHHHHHHHHhHhHHHHHHHHhcCHHHHHHHHHHH
Q 011164 395 KIEAAGKKKEQGNTLFKAGKYARASKRYEKAVKYIEYDTSFGDEEKKQAKALKVACNLNNAACKLKLKDYKQAEKLCTKV 474 (492)
Q Consensus 395 ~l~~a~~~K~~Gn~~fk~~~~~~A~~~Y~~al~~l~~~~~~~~~~~~~~~~~~~~l~~N~a~~~lk~~~~~~ai~~~~~a 474 (492)
..+.|..+|+.||.+|++|+|.+|+..|++|+++- +....+|+|+|.||+++++|++|+.+|+++
T Consensus 4 ~~d~A~a~~~lG~~~~~~~~~~~A~~~y~~Al~~~---------------p~~~~~~~nlg~~~~~~~~~~~A~~~~~~a 68 (127)
T 4gcn_A 4 MTDAAIAEKDLGNAAYKQKDFEKAHVHYDKAIELD---------------PSNITFYNNKAAVYFEEKKFAECVQFCEKA 68 (127)
T ss_dssp HHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHC---------------TTCHHHHHHHHHHHHHTTCHHHHHHHHHHH
T ss_pred cHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhC---------------CCCHHHHHhHHHHHHHhhhHHHHHHHHHHH
Confidence 35678899999999999999999999999999872 223778999999999999999999999999
Q ss_pred HhcCCCCccce
Q 011164 475 QQQKKFLLLPI 485 (492)
Q Consensus 475 l~~dp~n~KA~ 485 (492)
|+++|++..++
T Consensus 69 l~~~~~~~~~~ 79 (127)
T 4gcn_A 69 VEVGRETRADY 79 (127)
T ss_dssp HHHHHHTTCCH
T ss_pred HHhCcccchhh
Confidence 99999887543
No 81
>1w26_A Trigger factor, TF; chaperone, protein folding, ribosome associated protein, nascent chain, cell division, isomerase; 2.7A {Escherichia coli} SCOP: a.223.1.1 d.241.2.1 d.26.1.1 PDB: 2vrh_A 1w2b_5
Probab=99.10 E-value=3.9e-10 Score=114.65 Aligned_cols=88 Identities=14% Similarity=0.247 Sum_probs=79.0
Q ss_pred CCCCCCCEEEEEEEEEEcCCcEEEEcCCCCCcccEEEEcCCcccchhHHHHHhccCcCcEEEEEECCCCccCCCcccccc
Q 011164 284 ERPNEGAVVKVKLIGKLQDGTVFVKKGHSEEEQLFEFKTDEEQVIDGLDRAVITMKKNEVALLTIAPEYAFGSAESQQEL 363 (492)
Q Consensus 284 ~~p~~g~~V~v~y~~~~~~g~~~d~~~~~~~~~~~~~~lg~~~~~~gle~~l~~m~~Ge~~~i~ip~~~~yg~~~~~~~~ 363 (492)
..+..||.|++||+++. ||+.|++++ ..|+.|.+|.|.+++||+.+|.||++|+++.|.+|+..+||..+
T Consensus 156 ~~~~~gD~V~i~y~g~~-dG~~fd~~~----~~~~~~~lG~g~~ipgfee~L~G~k~Ge~~~v~v~~~~~yg~~~----- 225 (432)
T 1w26_A 156 GAVEAEDRVTIDFTGSV-DGEEFEGGK----ASDFVLAMGQGRMIPGFEDGIKGHKAGEEFTIDVTFPEEYHAEN----- 225 (432)
T ss_dssp SCCCTTCEEEECEEEES-SSCBCSSCC----CSSEEEETTSCCSCTTHHHHSSSCCSSCEEEEEEECCTTCSCTT-----
T ss_pred CCCCCCCEEEEEEEEee-CCeEccCCC----ccceEEEeCCCCcchHHHHHhCCCCCCCEEEEEECCchhhCCCC-----
Confidence 56899999999999995 999998763 67899999999999999999999999999999999999999653
Q ss_pred ccCCCCccEEEEEEEeeeeec
Q 011164 364 AVVPPNSTVHYEVELVSFEKE 384 (492)
Q Consensus 364 ~~ip~~~~l~~~v~l~~~~~~ 384 (492)
.+|++++|+|+|+++...
T Consensus 226 ---lag~~~~F~V~v~~v~~~ 243 (432)
T 1w26_A 226 ---LKGKAAKFAINLKKVEER 243 (432)
T ss_dssp ---TSSCEEEEEEECCEECCE
T ss_pred ---CCCceEEEEEEEEEEecc
Confidence 357899999999999863
No 82
>1t11_A Trigger factor, TF; helix-turn-helix, four-helix-bundle, ppiase, chaperone; 2.50A {Vibrio cholerae} SCOP: a.223.1.1 d.241.2.1 d.26.1.1 PDB: 1l1p_A
Probab=99.06 E-value=9.6e-11 Score=117.51 Aligned_cols=101 Identities=20% Similarity=0.428 Sum_probs=87.8
Q ss_pred CCCCCCCEEEEEEEEEecCCCEEeecCCCCCcEEEEcCCCcccHhHHHHhccCcCccEEEEEecCCcccCCCCCCCCCCC
Q 011164 51 DTPENGDEVEVHYTGTLLDGTQFDSSRDRSTPFKFTLGQGNVIKGWDIGIKTMKKGENAVFTIPPELAYGESGSPPTIPP 130 (492)
Q Consensus 51 ~~~~~gd~V~v~Y~~~~~dg~~~~ss~~~~~p~~f~lg~~~~~~gle~~l~~m~~Ge~~~~~i~~~~ayg~~~~~~~i~~ 130 (492)
..++.||.|.+||+++ .||+.|+++. +.|+.|.+|.+++++||+.+|.||++|+++.|.++....||..+. +
T Consensus 159 ~~~~~gD~V~i~y~g~-~dG~~fd~~~--~~~~~~~lG~g~~ipgfee~L~Gmk~Ge~~~v~v~fp~dy~~~~l-----a 230 (392)
T 1t11_A 159 EAAENGKRVSIDFVGS-IDGVEFEGGK--AENFPLEMGAGRMIPGFEDGIVGKTKGMEFVIDVTFPEDYHAENL-----K 230 (392)
T ss_dssp CCCCTTCEEEEEEEEE-SSSSCCTTCE--EEEEEEETTSCCBSTTSGGGTTTCCSSCCCCEEEECCTTCSCTTT-----S
T ss_pred CCCCCCCEEEEEEEEE-ECCEEccCCC--ccceEEEecCCCcchhHHHHhCCCCCCCEEEEEEeCccccccCCC-----C
Confidence 4689999999999999 4999999884 479999999999999999999999999999999987678886553 6
Q ss_pred CCceEEEEEEEEEeecccccccccceeee
Q 011164 131 NATLQFDVELLSWTSVKDICKDGGIIKKI 159 (492)
Q Consensus 131 ~~~l~~~vel~~~~~~~~~~~d~~~~k~i 159 (492)
|++++|.|+|.++.....+..|..+++.+
T Consensus 231 Gk~~~F~V~v~~i~~~~lpeldDEfak~~ 259 (392)
T 1t11_A 231 GKAAKFAIKVNKVEARELPELNDEFVARF 259 (392)
T ss_dssp SCEEEECCCEEEEEEEECCCCSTGGGGGG
T ss_pred CCeEEEEEEEEEEEcCCCCCcCHHHHHHh
Confidence 79999999999999877777777777654
No 83
>1ihg_A Cyclophilin 40; ppiase immunophilin tetratricopeptide, isomerase; 1.80A {Bos taurus} SCOP: a.118.8.1 b.62.1.1 PDB: 1iip_A
Probab=99.00 E-value=4.1e-10 Score=112.87 Aligned_cols=101 Identities=24% Similarity=0.426 Sum_probs=86.0
Q ss_pred ChHHHHHHHHHHHHhhhHHHHcccHHHHHHHHHHHHHHhcccC-CCChHHHHHHHHHHHHhHhHHHHHHHHhcCHHHHHH
Q 011164 391 NTEEKIEAAGKKKEQGNTLFKAGKYARASKRYEKAVKYIEYDT-SFGDEEKKQAKALKVACNLNNAACKLKLKDYKQAEK 469 (492)
Q Consensus 391 ~~~e~l~~a~~~K~~Gn~~fk~~~~~~A~~~Y~~al~~l~~~~-~~~~~~~~~~~~~~~~l~~N~a~~~lk~~~~~~ai~ 469 (492)
+.++.++.+..++..|+.++++++|.+|+..|++|++++.... ....++.....+....+|+|+|.|++++++|++|+.
T Consensus 215 ~~~~~~~~a~~~~~~g~~~~~~g~~~~Ai~~y~kAl~~~~~~~~~~~~~~~~~~~~~~~~~~~nla~~~~~~g~~~~A~~ 294 (370)
T 1ihg_A 215 DVDKILLISEDLKNIGNTFFKSQNWEMAIKKYTKVLRYVEGSRAAAEDADGAKLQPVALSCVLNIGACKLKMSDWQGAVD 294 (370)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHHHHSCHHHHGGGHHHHHHHHHHHHHHHHHTTCHHHHHH
T ss_pred cHHHHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHhhcCccccChHHHHHHHHHHHHHHHHHHHHHHhccCHHHHHH
Confidence 5778899999999999999999999999999999999765421 111233334677889999999999999999999999
Q ss_pred HHHHHHhcCCCCccceeeeecc
Q 011164 470 LCTKVQQQKKFLLLPIFNIYAR 491 (492)
Q Consensus 470 ~~~~al~~dp~n~KA~~r~~~~ 491 (492)
+|++||+++|++.+|+|++..+
T Consensus 295 ~~~~al~~~p~~~~a~~~lg~~ 316 (370)
T 1ihg_A 295 SCLEALEIDPSNTKALYRRAQG 316 (370)
T ss_dssp HHHHHHTTCTTCHHHHHHHHHH
T ss_pred HHHHHHHhCchhHHHHHHHHHH
Confidence 9999999999999999987643
No 84
>1t11_A Trigger factor, TF; helix-turn-helix, four-helix-bundle, ppiase, chaperone; 2.50A {Vibrio cholerae} SCOP: a.223.1.1 d.241.2.1 d.26.1.1 PDB: 1l1p_A
Probab=98.94 E-value=4e-10 Score=112.98 Aligned_cols=88 Identities=14% Similarity=0.339 Sum_probs=76.5
Q ss_pred CCCCCCCEEEEEEEEEEcCCcEEEEcCCCCCcccEEEEcCCcccchhHHHHHhccCcCcEEEEEECCCCccCCCcccccc
Q 011164 284 ERPNEGAVVKVKLIGKLQDGTVFVKKGHSEEEQLFEFKTDEEQVIDGLDRAVITMKKNEVALLTIAPEYAFGSAESQQEL 363 (492)
Q Consensus 284 ~~p~~g~~V~v~y~~~~~~g~~~d~~~~~~~~~~~~~~lg~~~~~~gle~~l~~m~~Ge~~~i~ip~~~~yg~~~~~~~~ 363 (492)
..+..||.|++||+++. ||+.|+++ ...++.|.+|.|.+++||+.+|.||++|+++.|.++....||..+
T Consensus 159 ~~~~~gD~V~i~y~g~~-dG~~fd~~----~~~~~~~~lG~g~~ipgfee~L~Gmk~Ge~~~v~v~fp~dy~~~~----- 228 (392)
T 1t11_A 159 EAAENGKRVSIDFVGSI-DGVEFEGG----KAENFPLEMGAGRMIPGFEDGIVGKTKGMEFVIDVTFPEDYHAEN----- 228 (392)
T ss_dssp CCCCTTCEEEEEEEEES-SSSCCTTC----EEEEEEEETTSCCBSTTSGGGTTTCCSSCCCCEEEECCTTCSCTT-----
T ss_pred CCCCCCCEEEEEEEEEE-CCEEccCC----CccceEEEecCCCcchhHHHHhCCCCCCCEEEEEEeCccccccCC-----
Confidence 46899999999999995 89999765 467999999999999999999999999999999997556677432
Q ss_pred ccCCCCccEEEEEEEeeeeec
Q 011164 364 AVVPPNSTVHYEVELVSFEKE 384 (492)
Q Consensus 364 ~~ip~~~~l~~~v~l~~~~~~ 384 (492)
.+|++++|+|+|+++...
T Consensus 229 ---laGk~~~F~V~v~~i~~~ 246 (392)
T 1t11_A 229 ---LKGKAAKFAIKVNKVEAR 246 (392)
T ss_dssp ---TSSCEEEECCCEEEEEEE
T ss_pred ---CCCCeEEEEEEEEEEEcC
Confidence 358899999999999864
No 85
>3upv_A Heat shock protein STI1; TPR-fold, adaptor protein for HSP70 and HSP90, C-terminal PA HSP70, peptide binding protein; 1.60A {Saccharomyces cerevisiae}
Probab=98.88 E-value=1.1e-09 Score=91.08 Aligned_cols=77 Identities=19% Similarity=0.243 Sum_probs=69.1
Q ss_pred HHHHHHHhhhHHHHcccHHHHHHHHHHHHHHhcccCCCChHHHHHHHHHHHHhHhHHHHHHHHhcCHHHHHHHHHHHHhc
Q 011164 398 AAGKKKEQGNTLFKAGKYARASKRYEKAVKYIEYDTSFGDEEKKQAKALKVACNLNNAACKLKLKDYKQAEKLCTKVQQQ 477 (492)
Q Consensus 398 ~a~~~K~~Gn~~fk~~~~~~A~~~Y~~al~~l~~~~~~~~~~~~~~~~~~~~l~~N~a~~~lk~~~~~~ai~~~~~al~~ 477 (492)
.+..++..|+.+++.|+|.+|+..|+++++.-. ....++.|+|.|++++++|++|+.++++++++
T Consensus 3 ~a~~~~~~g~~~~~~~~~~~A~~~~~~al~~~p---------------~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~~ 67 (126)
T 3upv_A 3 KAEEARLEGKEYFTKSDWPNAVKAYTEMIKRAP---------------EDARGYSNRAAALAKLMSFPEAIADCNKAIEK 67 (126)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCT---------------TCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH
T ss_pred hHHHHHHHHHHHHHhcCHHHHHHHHHHHHHhCC---------------CChHHHHHHHHHHHHhcCHHHHHHHHHHHHHh
Confidence 567899999999999999999999999998732 23688999999999999999999999999999
Q ss_pred CCCCccceeeee
Q 011164 478 KKFLLLPIFNIY 489 (492)
Q Consensus 478 dp~n~KA~~r~~ 489 (492)
+|++.++++++.
T Consensus 68 ~p~~~~~~~~lg 79 (126)
T 3upv_A 68 DPNFVRAYIRKA 79 (126)
T ss_dssp CTTCHHHHHHHH
T ss_pred CCCcHHHHHHHH
Confidence 999999988764
No 86
>2l6j_A TPR repeat-containing protein associated with HSP; tetratricopeptide repeat (TPR), HSP90 CO-factor, protein BIN; NMR {Saccharomyces cerevisiae}
Probab=98.73 E-value=1.1e-08 Score=82.46 Aligned_cols=77 Identities=27% Similarity=0.360 Sum_probs=67.1
Q ss_pred HHHHHHHhhhHHHHcccHHHHHHHHHHHHHHhcccCCCChHHHHHHHHHHHHhHhHHHHHHHHhcCHHHHHHHHHHHHhc
Q 011164 398 AAGKKKEQGNTLFKAGKYARASKRYEKAVKYIEYDTSFGDEEKKQAKALKVACNLNNAACKLKLKDYKQAEKLCTKVQQQ 477 (492)
Q Consensus 398 ~a~~~K~~Gn~~fk~~~~~~A~~~Y~~al~~l~~~~~~~~~~~~~~~~~~~~l~~N~a~~~lk~~~~~~ai~~~~~al~~ 477 (492)
.+..+...|+.+++.|+|.+|+..|+++++... ....++.|+|.|++++++|++|+.++++++++
T Consensus 3 ~~~~~~~~g~~~~~~~~~~~A~~~~~~al~~~p---------------~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~ 67 (111)
T 2l6j_A 3 QFEKQKEQGNSLFKQGLYREAVHCYDQLITAQP---------------QNPVGYSNKAMALIKLGEYTQAIQMCQQGLRY 67 (111)
T ss_dssp HHHHHHHHHHHHHTTTCHHHHHHHHHHHHHHCT---------------TCHHHHHHHHHHHHHTTCHHHHHHHHHHHHTS
T ss_pred hHHHHHHHHHHHHHcCCHHHHHHHHHHHHhcCC---------------CCHHHHHHHHHHHHHhcCHHHHHHHHHHHHHh
Confidence 356788999999999999999999999998732 22677999999999999999999999999999
Q ss_pred CCCC------ccceeeee
Q 011164 478 KKFL------LLPIFNIY 489 (492)
Q Consensus 478 dp~n------~KA~~r~~ 489 (492)
+|++ .++++++.
T Consensus 68 ~p~~~~~~~~~~~~~~~~ 85 (111)
T 2l6j_A 68 TSTAEHVAIRSKLQYRLE 85 (111)
T ss_dssp CSSTTSHHHHHHHHHHHH
T ss_pred CCCccHHHHHHHHHHHHH
Confidence 9998 77776643
No 87
>3gyz_A Chaperone protein IPGC; asymmetric homodimer, tetratricopeptide repeat, TPR, chapero virulence; 2.15A {Shigella flexneri} PDB: 3gz1_A 3gz2_A 3ks2_A
Probab=98.72 E-value=8.3e-09 Score=89.50 Aligned_cols=79 Identities=15% Similarity=0.134 Sum_probs=69.8
Q ss_pred HHHHHHHHhhhHHHHcccHHHHHHHHHHHHHHhcccCCCChHHHHHHHHHHHHhHhHHHHHHHHhcCHHHHHHHHHHHHh
Q 011164 397 EAAGKKKEQGNTLFKAGKYARASKRYEKAVKYIEYDTSFGDEEKKQAKALKVACNLNNAACKLKLKDYKQAEKLCTKVQQ 476 (492)
Q Consensus 397 ~~a~~~K~~Gn~~fk~~~~~~A~~~Y~~al~~l~~~~~~~~~~~~~~~~~~~~l~~N~a~~~lk~~~~~~ai~~~~~al~ 476 (492)
..+..+...|..+++.|+|.+|+..|++++.. .+.....+.|+|.|+.++++|++|+.++.++++
T Consensus 34 ~~~~~~~~lg~~~~~~g~~~eA~~~~~~al~~---------------~P~~~~~~~~lg~~~~~~g~~~~Ai~~~~~al~ 98 (151)
T 3gyz_A 34 DMMDDIYSYAYDFYNKGRIEEAEVFFRFLCIY---------------DFYNVDYIMGLAAIYQIKEQFQQAADLYAVAFA 98 (151)
T ss_dssp HHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH---------------CTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHh---------------CCCCHHHHHHHHHHHHHHccHHHHHHHHHHHHh
Confidence 34667889999999999999999999999987 333477899999999999999999999999999
Q ss_pred cCCCCccceeeeec
Q 011164 477 QKKFLLLPIFNIYA 490 (492)
Q Consensus 477 ~dp~n~KA~~r~~~ 490 (492)
++|+++.++|++..
T Consensus 99 l~P~~~~~~~~lg~ 112 (151)
T 3gyz_A 99 LGKNDYTPVFHTGQ 112 (151)
T ss_dssp HSSSCCHHHHHHHH
T ss_pred hCCCCcHHHHHHHH
Confidence 99999999987643
No 88
>3sz7_A HSC70 cochaperone (SGT); TPR domain, GET4, GET5, GET3, MDY2, SSA1, SSE1, chaperone regulator; 1.72A {Aspergillus fumigatus}
Probab=98.68 E-value=1.2e-08 Score=89.16 Aligned_cols=78 Identities=15% Similarity=0.066 Sum_probs=58.4
Q ss_pred HHHHHHHHhhhHHHHcccHHHHHHHHHHHHHHhcccCCCChHHHHHHHHHHHHhHhHHHHHHHHhcCHHHHHHHHHHHHh
Q 011164 397 EAAGKKKEQGNTLFKAGKYARASKRYEKAVKYIEYDTSFGDEEKKQAKALKVACNLNNAACKLKLKDYKQAEKLCTKVQQ 476 (492)
Q Consensus 397 ~~a~~~K~~Gn~~fk~~~~~~A~~~Y~~al~~l~~~~~~~~~~~~~~~~~~~~l~~N~a~~~lk~~~~~~ai~~~~~al~ 476 (492)
..+..+...|+.+++.|+|.+|+..|+++++.-.. ...++.|+|.|++++++|++|+.++.++++
T Consensus 9 ~~a~~~~~~g~~~~~~g~~~~A~~~~~~al~~~p~---------------~~~~~~~l~~~~~~~g~~~~A~~~~~~al~ 73 (164)
T 3sz7_A 9 PESDKLKSEGNAAMARKEYSKAIDLYTQALSIAPA---------------NPIYLSNRAAAYSASGQHEKAAEDAELATV 73 (164)
T ss_dssp HHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHSTT---------------CHHHHHHHHHHHHHTTCHHHHHHHHHHHHH
T ss_pred hhHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCc---------------CHHHHHHHHHHHHHccCHHHHHHHHHHHHH
Confidence 45778899999999999999999999999987322 245666677777777777777777777777
Q ss_pred cCCCCccceeeee
Q 011164 477 QKKFLLLPIFNIY 489 (492)
Q Consensus 477 ~dp~n~KA~~r~~ 489 (492)
++|++..+++++.
T Consensus 74 ~~p~~~~~~~~lg 86 (164)
T 3sz7_A 74 VDPKYSKAWSRLG 86 (164)
T ss_dssp HCTTCHHHHHHHH
T ss_pred hCCCCHHHHHHHH
Confidence 7776666666543
No 89
>4gco_A Protein STI-1; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, tetratricopeptide repeat domain; 1.60A {Caenorhabditis elegans}
Probab=98.56 E-value=5.3e-08 Score=81.45 Aligned_cols=75 Identities=13% Similarity=0.163 Sum_probs=65.7
Q ss_pred HHHHHHhhhHHHHcccHHHHHHHHHHHHHHhcccCCCChHHHHHHHHHHHHhHhHHHHHHHHhcCHHHHHHHHHHHHhcC
Q 011164 399 AGKKKEQGNTLFKAGKYARASKRYEKAVKYIEYDTSFGDEEKKQAKALKVACNLNNAACKLKLKDYKQAEKLCTKVQQQK 478 (492)
Q Consensus 399 a~~~K~~Gn~~fk~~~~~~A~~~Y~~al~~l~~~~~~~~~~~~~~~~~~~~l~~N~a~~~lk~~~~~~ai~~~~~al~~d 478 (492)
+..+...|..+++.|+|.+|+..|++++++ ++....+|.|+|.|+.++++|++|+.++.++|+++
T Consensus 47 ~~~~~~~~~~~~~~~~~~~A~~~~~~al~~---------------~p~~~~a~~~lg~~~~~~~~~~~A~~~~~~al~l~ 111 (126)
T 4gco_A 47 AILYSNRAACLTKLMEFQRALDDCDTCIRL---------------DSKFIKGYIRKAACLVAMREWSKAQRAYEDALQVD 111 (126)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHH---------------CTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHC
T ss_pred HHHHHHHhhHHHhhccHHHHHHHHHHHHHh---------------hhhhhHHHHHHHHHHHHCCCHHHHHHHHHHHHHHC
Confidence 345678899999999999999999999987 22346789999999999999999999999999999
Q ss_pred CCCccceeee
Q 011164 479 KFLLLPIFNI 488 (492)
Q Consensus 479 p~n~KA~~r~ 488 (492)
|+|..|+..+
T Consensus 112 P~~~~a~~~l 121 (126)
T 4gco_A 112 PSNEEAREGV 121 (126)
T ss_dssp TTCHHHHHHH
T ss_pred cCCHHHHHHH
Confidence 9999887543
No 90
>2v5f_A Prolyl 4-hydroxylase subunit alpha-1; endoplasmic reticulum, metal-binding, oxidoreductase; 2.03A {Homo sapiens} PDB: 1tjc_A
Probab=98.52 E-value=2.5e-07 Score=74.51 Aligned_cols=79 Identities=15% Similarity=0.029 Sum_probs=66.1
Q ss_pred HHHHhhhHHHHcccHHHHHHHHHHHHHHhcccCCCChHHHHHHHHHHHHhHhHHHHHHHHhcCHHHHHHHHHHHHhcCCC
Q 011164 401 KKKEQGNTLFKAGKYARASKRYEKAVKYIEYDTSFGDEEKKQAKALKVACNLNNAACKLKLKDYKQAEKLCTKVQQQKKF 480 (492)
Q Consensus 401 ~~K~~Gn~~fk~~~~~~A~~~Y~~al~~l~~~~~~~~~~~~~~~~~~~~l~~N~a~~~lk~~~~~~ai~~~~~al~~dp~ 480 (492)
..-+.|+.+|++++|..|+..|++|++........ ......++.|+|.|+.++|+++.|+...+++|+++|+
T Consensus 7 dc~~lG~~~~~~~~y~~A~~W~~~Al~~~~~~~~~--------~~~~~~i~~~L~~~~~~~g~~~~A~~~~~~al~l~P~ 78 (104)
T 2v5f_A 7 DCFELGKVAYTEADYYHTELWMEQALRQLDEGEIS--------TIDKVSVLDYLSYAVYQQGDLDKALLLTKKLLELDPE 78 (104)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHHHHHHHHHTTCCC--------SSCHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTT
T ss_pred HHHHHHHHHHHccchHHHHHHHHHHHHhhhccCCC--------cccHHHHHHHHHHHHHHccCHHHHHHHHHHHHhcCCC
Confidence 45578999999999999999999999986433211 1234678899999999999999999999999999999
Q ss_pred Cccceee
Q 011164 481 LLLPIFN 487 (492)
Q Consensus 481 n~KA~~r 487 (492)
+..++.+
T Consensus 79 ~~~~~~n 85 (104)
T 2v5f_A 79 HQRANGN 85 (104)
T ss_dssp CHHHHHH
T ss_pred CHHHHhh
Confidence 9877654
No 91
>2vgx_A Chaperone SYCD; alternative dimer assembly, tetratricopeptide repeat, type III secretion; HET: MLY; 1.95A {Yersinia enterocolitica} SCOP: k.38.1.1 PDB: 2vgx_B* 2vgy_A*
Probab=98.48 E-value=1e-07 Score=82.04 Aligned_cols=77 Identities=12% Similarity=0.056 Sum_probs=63.1
Q ss_pred HHHHHHHhhhHHHHcccHHHHHHHHHHHHHHhcccCCCChHHHHHHHHHHHHhHhHHHHHHHHhcCHHHHHHHHHHHHhc
Q 011164 398 AAGKKKEQGNTLFKAGKYARASKRYEKAVKYIEYDTSFGDEEKKQAKALKVACNLNNAACKLKLKDYKQAEKLCTKVQQQ 477 (492)
Q Consensus 398 ~a~~~K~~Gn~~fk~~~~~~A~~~Y~~al~~l~~~~~~~~~~~~~~~~~~~~l~~N~a~~~lk~~~~~~ai~~~~~al~~ 477 (492)
.+..+...|..+++.|+|.+|+..|++++..- +....++.|+|.|+.++++|++|+..+++++.+
T Consensus 20 ~~~~~~~~g~~~~~~g~~~~A~~~~~~al~~~---------------p~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~l 84 (148)
T 2vgx_A 20 TLEQLYSLAFNQYQSGXYEDAHXVFQALCVLD---------------HYDSRFFLGLGACRQAMGQYDLAIHSYSYGAVM 84 (148)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHC---------------TTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH
T ss_pred hHHHHHHHHHHHHHcCChHHHHHHHHHHHHcC---------------cccHHHHHHHHHHHHHHhhHHHHHHHHHHHHhc
Confidence 45567789999999999999999999999862 223667788888888888888888888888888
Q ss_pred CCCCccceeeee
Q 011164 478 KKFLLLPIFNIY 489 (492)
Q Consensus 478 dp~n~KA~~r~~ 489 (492)
+|++..++|++.
T Consensus 85 ~p~~~~~~~~lg 96 (148)
T 2vgx_A 85 DIXEPRFPFHAA 96 (148)
T ss_dssp STTCTHHHHHHH
T ss_pred CCCCchHHHHHH
Confidence 888888877653
No 92
>4ga2_A E3 SUMO-protein ligase ranbp2; TPR motif, nuclear pore complex component nucleocytoplasmic transport, transport protein; 0.95A {Pan troglodytes} PDB: 4ga0_A 4ga1_A*
Probab=98.48 E-value=1.1e-07 Score=82.06 Aligned_cols=76 Identities=9% Similarity=-0.086 Sum_probs=63.6
Q ss_pred HHHHHHhhhHHHHcccHHHHHHHHHHHHHHhcccCCCChHHHHHHHHHHHHhHhHHHHHHHHhcCHHHHHHHHHHHHhcC
Q 011164 399 AGKKKEQGNTLFKAGKYARASKRYEKAVKYIEYDTSFGDEEKKQAKALKVACNLNNAACKLKLKDYKQAEKLCTKVQQQK 478 (492)
Q Consensus 399 a~~~K~~Gn~~fk~~~~~~A~~~Y~~al~~l~~~~~~~~~~~~~~~~~~~~l~~N~a~~~lk~~~~~~ai~~~~~al~~d 478 (492)
.......|+.+++.|+|.+|+..|+++++.- +....+|.|+|.|+.++++|++|+.++.++++++
T Consensus 31 ~~~~~~la~~y~~~~~~~~A~~~~~~al~~~---------------p~~~~a~~~lg~~~~~~~~~~~A~~~~~~al~~~ 95 (150)
T 4ga2_A 31 SIKGFYFAKLYYEAKEYDLAKKYICTYINVQ---------------ERDPKAHRFLGLLYELEENTDKAVECYRRSVELN 95 (150)
T ss_dssp HTTHHHHHHHHHHTTCHHHHHHHHHHHHHHC---------------TTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHC
T ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHHhC---------------CCCHHHHHHHHHHHHHcCchHHHHHHHHHHHHhC
Confidence 4455678999999999999999999999872 2336788899999999999999999999999999
Q ss_pred CCCccceeeee
Q 011164 479 KFLLLPIFNIY 489 (492)
Q Consensus 479 p~n~KA~~r~~ 489 (492)
|++..+++++.
T Consensus 96 p~~~~~~~~la 106 (150)
T 4ga2_A 96 PTQKDLVLKIA 106 (150)
T ss_dssp TTCHHHHHHHH
T ss_pred CCCHHHHHHHH
Confidence 99888887654
No 93
>3q49_B STIP1 homology and U box-containing protein 1; E3 ubiquitin ligase, ligase-chaperone complex; 1.54A {Mus musculus} PDB: 3q47_B 3q4a_B*
Probab=98.47 E-value=9e-08 Score=80.20 Aligned_cols=76 Identities=29% Similarity=0.343 Sum_probs=65.7
Q ss_pred HHHHHHhhhHHHHcccHHHHHHHHHHHHHHhcccCCCChHHHHHHHHHHHHhHhHHHHHHHHhcCHHHHHHHHHHHHhcC
Q 011164 399 AGKKKEQGNTLFKAGKYARASKRYEKAVKYIEYDTSFGDEEKKQAKALKVACNLNNAACKLKLKDYKQAEKLCTKVQQQK 478 (492)
Q Consensus 399 a~~~K~~Gn~~fk~~~~~~A~~~Y~~al~~l~~~~~~~~~~~~~~~~~~~~l~~N~a~~~lk~~~~~~ai~~~~~al~~d 478 (492)
+..+...|+.+++.|+|.+|+..|+++++.-.. ...++.|+|.|++++++|++|+..+.++++++
T Consensus 9 ~~~~~~~g~~~~~~~~~~~A~~~~~~al~~~~~---------------~~~~~~~l~~~~~~~~~~~~A~~~~~~al~~~ 73 (137)
T 3q49_B 9 AQELKEQGNRLFVGRKYPEAAACYGRAITRNPL---------------VAVYYTNRALCYLKMQQPEQALADCRRALELD 73 (137)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTT---------------CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHC
T ss_pred HHHHHHHHHHHHHhCcHHHHHHHHHHHHhhCcC---------------cHHHHHHHHHHHHHhcCHHHHHHHHHHHHHhC
Confidence 567789999999999999999999999987322 25688999999999999999999999999999
Q ss_pred CCCccceeeee
Q 011164 479 KFLLLPIFNIY 489 (492)
Q Consensus 479 p~n~KA~~r~~ 489 (492)
|++..+++++.
T Consensus 74 p~~~~~~~~l~ 84 (137)
T 3q49_B 74 GQSVKAHFFLG 84 (137)
T ss_dssp TTCHHHHHHHH
T ss_pred chhHHHHHHHH
Confidence 99988887654
No 94
>2c2l_A CHIP, carboxy terminus of HSP70-interacting protein; chaperone, E3 ligase, ubiquitinylation, TPR, heat-shock protein complex; 3.3A {Mus musculus} SCOP: a.118.8.1 g.44.1.2
Probab=98.44 E-value=8.3e-08 Score=92.05 Aligned_cols=77 Identities=30% Similarity=0.355 Sum_probs=68.7
Q ss_pred HHHHHHhhhHHHHcccHHHHHHHHHHHHHHhcccCCCChHHHHHHHHHHHHhHhHHHHHHHHhcCHHHHHHHHHHHHhcC
Q 011164 399 AGKKKEQGNTLFKAGKYARASKRYEKAVKYIEYDTSFGDEEKKQAKALKVACNLNNAACKLKLKDYKQAEKLCTKVQQQK 478 (492)
Q Consensus 399 a~~~K~~Gn~~fk~~~~~~A~~~Y~~al~~l~~~~~~~~~~~~~~~~~~~~l~~N~a~~~lk~~~~~~ai~~~~~al~~d 478 (492)
+..++..|+.+++.|+|.+|+..|+++++.-. ....+++|+|.|++++++|++|+.+++++++++
T Consensus 4 a~~~~~~g~~~~~~g~~~~A~~~~~~al~~~p---------------~~~~~~~~la~~~~~~~~~~~A~~~~~~al~~~ 68 (281)
T 2c2l_A 4 AQELKEQGNRLFVGRKYPEAAACYGRAITRNP---------------LVAVYYTNRALCYLKMQQPEQALADCRRALELD 68 (281)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCS---------------CCHHHHHHHHHHHHHTTCHHHHHHHHHHHTTSC
T ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCC---------------ccHHHHHHHHHHHHHhcCHHHHHHHHHHHHHhC
Confidence 56788999999999999999999999998732 236789999999999999999999999999999
Q ss_pred CCCccceeeeec
Q 011164 479 KFLLLPIFNIYA 490 (492)
Q Consensus 479 p~n~KA~~r~~~ 490 (492)
|++.++++++..
T Consensus 69 p~~~~~~~~lg~ 80 (281)
T 2c2l_A 69 GQSVKAHFFLGQ 80 (281)
T ss_dssp TTCHHHHHHHHH
T ss_pred CCCHHHHHHHHH
Confidence 999999887653
No 95
>2xcb_A PCRH, regulatory protein PCRH; protein transport, bacterial toxin, type III secretion, protein binding; 1.85A {Pseudomonas aeruginosa} PDB: 2xcc_A
Probab=98.43 E-value=1.8e-07 Score=79.60 Aligned_cols=76 Identities=18% Similarity=0.118 Sum_probs=61.8
Q ss_pred HHHHHHHhhhHHHHcccHHHHHHHHHHHHHHhcccCCCChHHHHHHHHHHHHhHhHHHHHHHHhcCHHHHHHHHHHHHhc
Q 011164 398 AAGKKKEQGNTLFKAGKYARASKRYEKAVKYIEYDTSFGDEEKKQAKALKVACNLNNAACKLKLKDYKQAEKLCTKVQQQ 477 (492)
Q Consensus 398 ~a~~~K~~Gn~~fk~~~~~~A~~~Y~~al~~l~~~~~~~~~~~~~~~~~~~~l~~N~a~~~lk~~~~~~ai~~~~~al~~ 477 (492)
.+..+...|..+++.|+|.+|+..|++++..- +....++.|+|.|+.++++|++|+..+++++.+
T Consensus 17 ~~~~~~~~a~~~~~~g~~~~A~~~~~~al~~~---------------p~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~ 81 (142)
T 2xcb_A 17 TLEQLYALGFNQYQAGKWDDAQKIFQALCMLD---------------HYDARYFLGLGACRQSLGLYEQALQSYSYGALM 81 (142)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHC---------------TTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHccHHHHHHHHHHHHHhC---------------CccHHHHHHHHHHHHHHhhHHHHHHHHHHHHhc
Confidence 35567788999999999999999999999862 223567788888888888888888888888888
Q ss_pred CCCCccceeee
Q 011164 478 KKFLLLPIFNI 488 (492)
Q Consensus 478 dp~n~KA~~r~ 488 (492)
+|++..+++++
T Consensus 82 ~p~~~~~~~~l 92 (142)
T 2xcb_A 82 DINEPRFPFHA 92 (142)
T ss_dssp CTTCTHHHHHH
T ss_pred CCCCcHHHHHH
Confidence 88888777654
No 96
>2kc7_A BFR218_protein; tetratricopeptide repeat, all-alpha, GFT-structural genomics, PSI-2, protein structure initiative; NMR {Bacteroides fragilis}
Probab=98.42 E-value=2.1e-07 Score=73.43 Aligned_cols=69 Identities=12% Similarity=-0.034 Sum_probs=61.0
Q ss_pred HHhhhHHHHcccHHHHHHHHHHHHHHhcccCCCChHHHHHHHHHHHH-hHhHHHHHHHHhcCHHHHHHHHHHHHhcCCCC
Q 011164 403 KEQGNTLFKAGKYARASKRYEKAVKYIEYDTSFGDEEKKQAKALKVA-CNLNNAACKLKLKDYKQAEKLCTKVQQQKKFL 481 (492)
Q Consensus 403 K~~Gn~~fk~~~~~~A~~~Y~~al~~l~~~~~~~~~~~~~~~~~~~~-l~~N~a~~~lk~~~~~~ai~~~~~al~~dp~n 481 (492)
..+|..+++.|+|.+|+..|+++++.-.. ... ++.|+|.|++++++|++|+..+.++++++|++
T Consensus 4 ~~~a~~~~~~~~~~~A~~~~~~al~~~p~---------------~~~~~~~~lg~~~~~~~~~~~A~~~~~~al~~~p~~ 68 (99)
T 2kc7_A 4 LKTIKELINQGDIENALQALEEFLQTEPV---------------GKDEAYYLMGNAYRKLGDWQKALNNYQSAIELNPDS 68 (99)
T ss_dssp HHHHHHHHHHTCHHHHHHHHHHHHHHCSS---------------THHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHCTTS
T ss_pred HHHHHHHHHcCCHHHHHHHHHHHHHHCCC---------------cHHHHHHHHHHHHHHcCCHHHHHHHHHHHHhcCCCc
Confidence 46789999999999999999999986321 245 89999999999999999999999999999999
Q ss_pred cccee
Q 011164 482 LLPIF 486 (492)
Q Consensus 482 ~KA~~ 486 (492)
..+++
T Consensus 69 ~~~~~ 73 (99)
T 2kc7_A 69 PALQA 73 (99)
T ss_dssp THHHH
T ss_pred HHHHH
Confidence 88773
No 97
>1na3_A Designed protein CTPR2; de novo protein; HET: IPT; 1.55A {Unidentified} SCOP: k.38.1.1 PDB: 2avp_A
Probab=98.39 E-value=3.9e-07 Score=70.24 Aligned_cols=76 Identities=22% Similarity=0.217 Sum_probs=65.9
Q ss_pred HHHHHHHhhhHHHHcccHHHHHHHHHHHHHHhcccCCCChHHHHHHHHHHHHhHhHHHHHHHHhcCHHHHHHHHHHHHhc
Q 011164 398 AAGKKKEQGNTLFKAGKYARASKRYEKAVKYIEYDTSFGDEEKKQAKALKVACNLNNAACKLKLKDYKQAEKLCTKVQQQ 477 (492)
Q Consensus 398 ~a~~~K~~Gn~~fk~~~~~~A~~~Y~~al~~l~~~~~~~~~~~~~~~~~~~~l~~N~a~~~lk~~~~~~ai~~~~~al~~ 477 (492)
.+..+...|..+++.++|.+|+..|+++++.... ...++.|+|.|+.++++|++|+..+.+++++
T Consensus 8 ~~~~~~~la~~~~~~~~~~~A~~~~~~a~~~~~~---------------~~~~~~~l~~~~~~~~~~~~A~~~~~~a~~~ 72 (91)
T 1na3_A 8 SAEAWYNLGNAYYKQGDYDEAIEYYQKALELDPN---------------NAEAWYNLGNAYYKQGDYDEAIEYYQKALEL 72 (91)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTT---------------CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH
T ss_pred cHHHHHHHHHHHHHccCHHHHHHHHHHHHhcCCC---------------CHHHHHHHHHHHHHHhhHHHHHHHHHHHHhc
Confidence 3456778899999999999999999999986321 2567899999999999999999999999999
Q ss_pred CCCCccceeee
Q 011164 478 KKFLLLPIFNI 488 (492)
Q Consensus 478 dp~n~KA~~r~ 488 (492)
+|++..+++++
T Consensus 73 ~p~~~~~~~~l 83 (91)
T 1na3_A 73 DPNNAEAKQNL 83 (91)
T ss_dssp CTTCHHHHHHH
T ss_pred CCCCHHHHHHH
Confidence 99998887664
No 98
>1hxi_A PEX5, peroxisome targeting signal 1 receptor PEX5; alpha helical, transport protein; 1.60A {Trypanosoma brucei} SCOP: a.118.8.1
Probab=98.37 E-value=2.1e-07 Score=77.12 Aligned_cols=74 Identities=9% Similarity=-0.026 Sum_probs=62.1
Q ss_pred HHHHhhhHHHHcccHHHHHHHHHHHHHHhcccCCCChHHHHHHHHHHHHhHhHHHHHHHHhcCHHHHHHHHHHHHhcCCC
Q 011164 401 KKKEQGNTLFKAGKYARASKRYEKAVKYIEYDTSFGDEEKKQAKALKVACNLNNAACKLKLKDYKQAEKLCTKVQQQKKF 480 (492)
Q Consensus 401 ~~K~~Gn~~fk~~~~~~A~~~Y~~al~~l~~~~~~~~~~~~~~~~~~~~l~~N~a~~~lk~~~~~~ai~~~~~al~~dp~ 480 (492)
.+...|..+++.|+|.+|+..|+++++.- +....++.++|.|+.+++++.+|+..+.++++++|+
T Consensus 19 ~~~~~g~~~~~~g~~~~A~~~~~~al~~~---------------P~~~~a~~~lg~~~~~~g~~~~A~~~~~~al~l~P~ 83 (121)
T 1hxi_A 19 NPMEEGLSMLKLANLAEAALAFEAVCQKE---------------PEREEAWRSLGLTQAENEKDGLAIIALNHARMLDPK 83 (121)
T ss_dssp CHHHHHHHHHHTTCHHHHHHHHHHHHHHS---------------TTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTT
T ss_pred hHHHHHHHHHHcCCHHHHHHHHHHHHHHC---------------CCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCC
Confidence 35678899999999999999999999872 223678889999999999999999999999999999
Q ss_pred Cccceeeee
Q 011164 481 LLLPIFNIY 489 (492)
Q Consensus 481 n~KA~~r~~ 489 (492)
+..+++++.
T Consensus 84 ~~~~~~~la 92 (121)
T 1hxi_A 84 DIAVHAALA 92 (121)
T ss_dssp CHHHHHHHH
T ss_pred CHHHHHHHH
Confidence 888876653
No 99
>2dba_A Smooth muscle cell associated protein-1, isoform 2; tetratricopeptide repeat, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=98.36 E-value=4.6e-07 Score=76.50 Aligned_cols=80 Identities=28% Similarity=0.405 Sum_probs=64.9
Q ss_pred HHHHHHHhhhHHHHcccHHHHHHHHHHHHHHhcccCCCChHHHHHHHHHHHHhHhHHHHHHHHhcCHHHHHHHHHHHHhc
Q 011164 398 AAGKKKEQGNTLFKAGKYARASKRYEKAVKYIEYDTSFGDEEKKQAKALKVACNLNNAACKLKLKDYKQAEKLCTKVQQQ 477 (492)
Q Consensus 398 ~a~~~K~~Gn~~fk~~~~~~A~~~Y~~al~~l~~~~~~~~~~~~~~~~~~~~l~~N~a~~~lk~~~~~~ai~~~~~al~~ 477 (492)
.+..+...|..+++.++|.+|+..|+++++.... ......++.|+|.|++++++|++|+..|.+++++
T Consensus 27 ~~~~~~~~a~~~~~~~~~~~A~~~~~~a~~~~~~------------~~~~~~~~~~~a~~~~~~~~~~~A~~~~~~~~~~ 94 (148)
T 2dba_A 27 SVEQLRKEGNELFKCGDYGGALAAYTQALGLDAT------------PQDQAVLHRNRAACHLKLEDYDKAETEASKAIEK 94 (148)
T ss_dssp CHHHHHHHHHHHHTTTCHHHHHHHHHHHHTSCCC------------HHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHccc------------chHHHHHHHHHHHHHHHHccHHHHHHHHHHHHhh
Confidence 3566788999999999999999999999976321 2335678888888888888888888888888888
Q ss_pred CCCCccceeeee
Q 011164 478 KKFLLLPIFNIY 489 (492)
Q Consensus 478 dp~n~KA~~r~~ 489 (492)
+|++..+++++.
T Consensus 95 ~~~~~~~~~~~a 106 (148)
T 2dba_A 95 DGGDVKALYRRS 106 (148)
T ss_dssp TSCCHHHHHHHH
T ss_pred CccCHHHHHHHH
Confidence 888887776653
No 100
>1a17_A Serine/threonine protein phosphatase 5; hydrolase, protein-protein interactions, TPR, S helix; 2.45A {Homo sapiens} SCOP: a.118.8.1 PDB: 2bug_A
Probab=98.33 E-value=6.6e-07 Score=77.13 Aligned_cols=81 Identities=22% Similarity=0.229 Sum_probs=55.9
Q ss_pred hHHHHHHHHHHHHhhhHHHHcccHHHHHHHHHHHHHHhcccCCCChHHHHHHHHHHHHhHhHHHHHHHHhcCHHHHHHHH
Q 011164 392 TEEKIEAAGKKKEQGNTLFKAGKYARASKRYEKAVKYIEYDTSFGDEEKKQAKALKVACNLNNAACKLKLKDYKQAEKLC 471 (492)
Q Consensus 392 ~~e~l~~a~~~K~~Gn~~fk~~~~~~A~~~Y~~al~~l~~~~~~~~~~~~~~~~~~~~l~~N~a~~~lk~~~~~~ai~~~ 471 (492)
.....+.+..+...|+.+++.|+|.+|+..|+++++.... ...++.|+|.|++++++|++|+..+
T Consensus 6 ~~~~~~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~~~~~---------------~~~~~~~~a~~~~~~~~~~~A~~~~ 70 (166)
T 1a17_A 6 ADGALKRAEELKTQANDYFKAKDYENAIKFYSQAIELNPS---------------NAIYYGNRSLAYLRTECYGYALGDA 70 (166)
T ss_dssp CHHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHSTT---------------CHHHHHHHHHHHHHTTCHHHHHHHH
T ss_pred hhhHHHHHHHHHHHHHHHHHccCHHHHHHHHHHHHHhCCC---------------ChHHHHHHHHHHHHcCCHHHHHHHH
Confidence 3567788999999999999999999999999999986322 1344555555555555555555555
Q ss_pred HHHHhcCCCCccceee
Q 011164 472 TKVQQQKKFLLLPIFN 487 (492)
Q Consensus 472 ~~al~~dp~n~KA~~r 487 (492)
.++++++|++..++++
T Consensus 71 ~~a~~~~~~~~~~~~~ 86 (166)
T 1a17_A 71 TRAIELDKKYIKGYYR 86 (166)
T ss_dssp HHHHHHCTTCHHHHHH
T ss_pred HHHHHhCcccHHHHHH
Confidence 5555555555544443
No 101
>1elw_A TPR1-domain of HOP; HOP, TPR-domain, peptide-complex, helical repeat, HSP70, protein binding, chaperone; 1.60A {Homo sapiens} SCOP: a.118.8.1
Probab=98.28 E-value=6.2e-07 Score=72.12 Aligned_cols=73 Identities=23% Similarity=0.166 Sum_probs=42.4
Q ss_pred HHHHHHHhhhHHHHcccHHHHHHHHHHHHHHhcccCCCChHHHHHHHHHHHHhHhHHHHHHHHhcCHHHHHHHHHHHHhc
Q 011164 398 AAGKKKEQGNTLFKAGKYARASKRYEKAVKYIEYDTSFGDEEKKQAKALKVACNLNNAACKLKLKDYKQAEKLCTKVQQQ 477 (492)
Q Consensus 398 ~a~~~K~~Gn~~fk~~~~~~A~~~Y~~al~~l~~~~~~~~~~~~~~~~~~~~l~~N~a~~~lk~~~~~~ai~~~~~al~~ 477 (492)
.+..+...|+.++..|+|.+|+..|++++...... ..++.++|.|++++++|++|+..+.+++++
T Consensus 3 ~~~~~~~~~~~~~~~~~~~~A~~~~~~~~~~~~~~---------------~~~~~~~a~~~~~~~~~~~A~~~~~~~~~~ 67 (118)
T 1elw_A 3 QVNELKEKGNKALSVGNIDDALQCYSEAIKLDPHN---------------HVLYSNRSAAYAKKGDYQKAYEDGCKTVDL 67 (118)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTC---------------HHHHHHHHHHHHHHTCHHHHHHHHHHHHHH
T ss_pred hHHHHHHHHHHHHHcccHHHHHHHHHHHHHHCCCc---------------HHHHHHHHHHHHhhccHHHHHHHHHHHHHh
Confidence 45667778888888888888888888888763211 233444444444444444444444444444
Q ss_pred CCCCccce
Q 011164 478 KKFLLLPI 485 (492)
Q Consensus 478 dp~n~KA~ 485 (492)
+|++..++
T Consensus 68 ~~~~~~~~ 75 (118)
T 1elw_A 68 KPDWGKGY 75 (118)
T ss_dssp CTTCHHHH
T ss_pred CcccHHHH
Confidence 44444333
No 102
>3sz7_A HSC70 cochaperone (SGT); TPR domain, GET4, GET5, GET3, MDY2, SSA1, SSE1, chaperone regulator; 1.72A {Aspergillus fumigatus}
Probab=98.28 E-value=5.7e-07 Score=78.25 Aligned_cols=77 Identities=12% Similarity=-0.037 Sum_probs=67.0
Q ss_pred HHHHHHhhhHHHHcccHHHHHHHHHHHHHHhcccCCCChHHHHHHHHHHHHhHhHHHHHHHHhcCHHHHHHHHHHHHhcC
Q 011164 399 AGKKKEQGNTLFKAGKYARASKRYEKAVKYIEYDTSFGDEEKKQAKALKVACNLNNAACKLKLKDYKQAEKLCTKVQQQK 478 (492)
Q Consensus 399 a~~~K~~Gn~~fk~~~~~~A~~~Y~~al~~l~~~~~~~~~~~~~~~~~~~~l~~N~a~~~lk~~~~~~ai~~~~~al~~d 478 (492)
+..+...|..+++.|+|.+|+..|+++++.-. ....++.|+|.|+.++++|++|+.++.++++++
T Consensus 45 ~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~p---------------~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~ 109 (164)
T 3sz7_A 45 PIYLSNRAAAYSASGQHEKAAEDAELATVVDP---------------KYSKAWSRLGLARFDMADYKGAKEAYEKGIEAE 109 (164)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCT---------------TCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHccCHHHHHHHHHHHHHhCC---------------CCHHHHHHHHHHHHHccCHHHHHHHHHHHHHhC
Confidence 34567889999999999999999999998722 237789999999999999999999999999999
Q ss_pred CCCccceeeeec
Q 011164 479 KFLLLPIFNIYA 490 (492)
Q Consensus 479 p~n~KA~~r~~~ 490 (492)
|++..++++..+
T Consensus 110 p~~~~~~~~~~l 121 (164)
T 3sz7_A 110 GNGGSDAMKRGL 121 (164)
T ss_dssp SSSCCHHHHHHH
T ss_pred CCchHHHHHHHH
Confidence 999988776543
No 103
>3vtx_A MAMA; tetratricopeptide repeats (TPR) containing protein, peptide protein, protein binding; 1.75A {Candidatus magnetobacterium bavaricum} PDB: 3vty_A
Probab=98.26 E-value=5.5e-07 Score=79.65 Aligned_cols=67 Identities=13% Similarity=0.001 Sum_probs=58.9
Q ss_pred HHHHhhhHHHHcccHHHHHHHHHHHHHHhcccCCCChHHHHHHHHHHHHhHhHHHHHHHHhcCHHHHHHHHHHHHhcCCC
Q 011164 401 KKKEQGNTLFKAGKYARASKRYEKAVKYIEYDTSFGDEEKKQAKALKVACNLNNAACKLKLKDYKQAEKLCTKVQQQKKF 480 (492)
Q Consensus 401 ~~K~~Gn~~fk~~~~~~A~~~Y~~al~~l~~~~~~~~~~~~~~~~~~~~l~~N~a~~~lk~~~~~~ai~~~~~al~~dp~ 480 (492)
.+...|..+++.|+|.+|+..|+++++.- +....++.|+|.|+.++|+|++|+.++++||+++|+
T Consensus 109 ~~~~lg~~~~~~g~~~~A~~~~~~~l~~~---------------p~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~p~ 173 (184)
T 3vtx_A 109 AYYKLGLVYDSMGEHDKAIEAYEKTISIK---------------PGFIRAYQSIGLAYEGKGLRDEAVKYFKKALEKEEK 173 (184)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHHHHHHHC---------------TTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHTTHH
T ss_pred HHHHHHHHHHHhCCchhHHHHHHHHHHhc---------------chhhhHHHHHHHHHHHCCCHHHHHHHHHHHHhCCcc
Confidence 45677899999999999999999999872 233678999999999999999999999999999998
Q ss_pred Cc
Q 011164 481 LL 482 (492)
Q Consensus 481 n~ 482 (492)
|.
T Consensus 174 ~a 175 (184)
T 3vtx_A 174 KA 175 (184)
T ss_dssp HH
T ss_pred CH
Confidence 64
No 104
>2hr2_A Hypothetical protein; alpha-alpha superhelix fold, structural genomics, joint CENT structural genomics, JCSG, protein structure initiative; 2.54A {Chlorobium tepidum} SCOP: a.118.8.8
Probab=98.26 E-value=1.8e-06 Score=74.65 Aligned_cols=77 Identities=14% Similarity=0.005 Sum_probs=63.7
Q ss_pred HHHHHHHhhhHHHHcccHHHHHHHHHHHHHHhcccCCCChHHHHHHHHHHHHhH----hHHHHHHHHhcCHHHHHHHHHH
Q 011164 398 AAGKKKEQGNTLFKAGKYARASKRYEKAVKYIEYDTSFGDEEKKQAKALKVACN----LNNAACKLKLKDYKQAEKLCTK 473 (492)
Q Consensus 398 ~a~~~K~~Gn~~fk~~~~~~A~~~Y~~al~~l~~~~~~~~~~~~~~~~~~~~l~----~N~a~~~lk~~~~~~ai~~~~~ 473 (492)
.+..+-.+|..+.+.|+|.+|+..|.+||.+++......++ ...+| +|++.|+.++++|++|+.++++
T Consensus 56 ~a~a~~n~g~al~~Lgr~~eAl~~~~kAL~l~n~~~e~~pd--------~~~A~~~~~~~rG~aL~~lgr~eEAl~~y~k 127 (159)
T 2hr2_A 56 DAFCHAGLAEALAGLRSFDEALHSADKALHYFNRRGELNQD--------EGKLWISAVYSRALALDGLGRGAEAMPEFKK 127 (159)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHCCTTST--------HHHHHHHHHHHHHHHHHHTTCHHHHHHHHHH
T ss_pred hHHHHHHHHHHHHHCCCHHHHHHHHHHHHHhhhccccCCCc--------hHHHHHHHHHhHHHHHHHCCCHHHHHHHHHH
Confidence 34578899999999999999999999999975443333222 34455 9999999999999999999999
Q ss_pred HHhcCCCCc
Q 011164 474 VQQQKKFLL 482 (492)
Q Consensus 474 al~~dp~n~ 482 (492)
||+++|++.
T Consensus 128 Alel~p~d~ 136 (159)
T 2hr2_A 128 VVEMIEERK 136 (159)
T ss_dssp HHHHHHHCC
T ss_pred HHhcCCCcH
Confidence 999999753
No 105
>3urz_A Uncharacterized protein; tetratricopeptide repeats (TPR) containing protein, structur genomics, joint center for structural genomics, JCSG; HET: PG4; 2.19A {Bacteroides ovatus}
Probab=98.22 E-value=2e-06 Score=78.23 Aligned_cols=89 Identities=10% Similarity=0.028 Sum_probs=48.8
Q ss_pred HHHHHHhhhHHHHcccHHHHHHHHHHHHHHhcccCCCChH-HHHHHHHHHHHhHhHHHHHHHHhcCHHHHHHHHHHHHhc
Q 011164 399 AGKKKEQGNTLFKAGKYARASKRYEKAVKYIEYDTSFGDE-EKKQAKALKVACNLNNAACKLKLKDYKQAEKLCTKVQQQ 477 (492)
Q Consensus 399 a~~~K~~Gn~~fk~~~~~~A~~~Y~~al~~l~~~~~~~~~-~~~~~~~~~~~l~~N~a~~~lk~~~~~~ai~~~~~al~~ 477 (492)
+..+..+|..+++.|+|.+|+..|+++++.-.......-. ...........+++|+|.|+.++++|++|+..++++|++
T Consensus 4 ~~~~~~~g~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~~~~~~~~~~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~ 83 (208)
T 3urz_A 4 VDEMLQKVSAAIEAGQNGQAVSYFRQTIALNIDRTEMYYWTNVDKNSEISSKLATELALAYKKNRNYDKAYLFYKELLQK 83 (208)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCHHHHHHHHHHHSCTTSHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHCCCHHHHHHHHHHHHHhCCCChHHHHHhhhcchhhhhHHHHHHHHHHHHHCCCHHHHHHHHHHHHHH
Confidence 5567889999999999999999999999862210000000 000000111122223555555555555555555555555
Q ss_pred CCCCccceee
Q 011164 478 KKFLLLPIFN 487 (492)
Q Consensus 478 dp~n~KA~~r 487 (492)
+|++..++++
T Consensus 84 ~p~~~~~~~~ 93 (208)
T 3urz_A 84 APNNVDCLEA 93 (208)
T ss_dssp CTTCHHHHHH
T ss_pred CCCCHHHHHH
Confidence 5555555443
No 106
>3urz_A Uncharacterized protein; tetratricopeptide repeats (TPR) containing protein, structur genomics, joint center for structural genomics, JCSG; HET: PG4; 2.19A {Bacteroides ovatus}
Probab=98.17 E-value=1.7e-06 Score=78.65 Aligned_cols=71 Identities=18% Similarity=0.099 Sum_probs=63.9
Q ss_pred HhhhHHHHcccHHHHHHHHHHHHHHhcccCCCChHHHHHHHHHHHHhHhHHHHHHHHhcCHHHHHHHHHHHHhcCCCCcc
Q 011164 404 EQGNTLFKAGKYARASKRYEKAVKYIEYDTSFGDEEKKQAKALKVACNLNNAACKLKLKDYKQAEKLCTKVQQQKKFLLL 483 (492)
Q Consensus 404 ~~Gn~~fk~~~~~~A~~~Y~~al~~l~~~~~~~~~~~~~~~~~~~~l~~N~a~~~lk~~~~~~ai~~~~~al~~dp~n~K 483 (492)
..|..+++.|+|.+|+..|+++++.- +....++.|+|.|++++|+|++|+..++++|+++|+|..
T Consensus 59 ~lg~~~~~~g~~~~A~~~~~~al~~~---------------p~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~P~~~~ 123 (208)
T 3urz_A 59 ELALAYKKNRNYDKAYLFYKELLQKA---------------PNNVDCLEACAEMQVCRGQEKDALRMYEKILQLEADNLA 123 (208)
T ss_dssp HHHHHHHHTTCHHHHHHHHHHHHHHC---------------TTCHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHCTTCHH
T ss_pred HHHHHHHHCCCHHHHHHHHHHHHHHC---------------CCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHcCCCCHH
Confidence 38999999999999999999999872 223778999999999999999999999999999999999
Q ss_pred ceeeee
Q 011164 484 PIFNIY 489 (492)
Q Consensus 484 A~~r~~ 489 (492)
+++++.
T Consensus 124 a~~~lg 129 (208)
T 3urz_A 124 ANIFLG 129 (208)
T ss_dssp HHHHHH
T ss_pred HHHHHH
Confidence 887653
No 107
>2lni_A Stress-induced-phosphoprotein 1; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative, chaperone; NMR {Homo sapiens}
Probab=98.17 E-value=9.2e-07 Score=72.98 Aligned_cols=90 Identities=24% Similarity=0.217 Sum_probs=53.3
Q ss_pred HHHHHHHhhhHHHHcccHHHHHHHHHHHHHHhccc-----------CCCC--hHHHHH------HHHHHHHhHhHHHHHH
Q 011164 398 AAGKKKEQGNTLFKAGKYARASKRYEKAVKYIEYD-----------TSFG--DEEKKQ------AKALKVACNLNNAACK 458 (492)
Q Consensus 398 ~a~~~K~~Gn~~fk~~~~~~A~~~Y~~al~~l~~~-----------~~~~--~~~~~~------~~~~~~~l~~N~a~~~ 458 (492)
....+...|+.+++.++|.+|+..|+++++..... .... ++.... ..+....++.|+|.|+
T Consensus 15 ~~~~~~~~~~~~~~~~~~~~A~~~~~~al~~~~~~~~~~~~la~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~la~~~ 94 (133)
T 2lni_A 15 LALMVKNKGNECFQKGDYPQAMKHYTEAIKRNPKDAKLYSNRAACYTKLLEFQLALKDCEECIQLEPTFIKGYTRKAAAL 94 (133)
T ss_dssp HHHHHHHHHHHHHHTTCSHHHHHHHHHHHTTCTTCHHHHHHHHHHHTTTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHH
T ss_pred cHHHHHHHHHHHHHcCCHHHHHHHHHHHHHcCCCcHHHHHHHHHHHHHhccHHHHHHHHHHHHHhCCCchHHHHHHHHHH
Confidence 35677788888999999999999999988753211 0000 000000 1112234566666666
Q ss_pred HHhcCHHHHHHHHHHHHhcCCCCccceee
Q 011164 459 LKLKDYKQAEKLCTKVQQQKKFLLLPIFN 487 (492)
Q Consensus 459 lk~~~~~~ai~~~~~al~~dp~n~KA~~r 487 (492)
+++++|++|+..+.++++++|++..++++
T Consensus 95 ~~~~~~~~A~~~~~~~~~~~p~~~~~~~~ 123 (133)
T 2lni_A 95 EAMKDYTKAMDVYQKALDLDSSCKEAADG 123 (133)
T ss_dssp HHTTCHHHHHHHHHHHHHHCGGGTHHHHH
T ss_pred HHHhhHHHHHHHHHHHHHhCCCchHHHHH
Confidence 66666666666666666666665555443
No 108
>3gyz_A Chaperone protein IPGC; asymmetric homodimer, tetratricopeptide repeat, TPR, chapero virulence; 2.15A {Shigella flexneri} PDB: 3gz1_A 3gz2_A 3ks2_A
Probab=98.16 E-value=2.2e-06 Score=74.00 Aligned_cols=69 Identities=14% Similarity=0.081 Sum_probs=60.4
Q ss_pred HHHHHHhhhHHHHcccHHHHHHHHHHHHHHhcccCCCChHHHHHHHHHHHHhHhHHHHHHHHhcCHHHHHHHHHHHHhcC
Q 011164 399 AGKKKEQGNTLFKAGKYARASKRYEKAVKYIEYDTSFGDEEKKQAKALKVACNLNNAACKLKLKDYKQAEKLCTKVQQQK 478 (492)
Q Consensus 399 a~~~K~~Gn~~fk~~~~~~A~~~Y~~al~~l~~~~~~~~~~~~~~~~~~~~l~~N~a~~~lk~~~~~~ai~~~~~al~~d 478 (492)
+..+...|..+++.|+|.+|+..|++++++-. .....+.|+|.|++++|++++|+..+++|++++
T Consensus 70 ~~~~~~lg~~~~~~g~~~~Ai~~~~~al~l~P---------------~~~~~~~~lg~~~~~lg~~~eA~~~~~~al~l~ 134 (151)
T 3gyz_A 70 VDYIMGLAAIYQIKEQFQQAADLYAVAFALGK---------------NDYTPVFHTGQCQLRLKAPLKAKECFELVIQHS 134 (151)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHSS---------------SCCHHHHHHHHHHHHTTCHHHHHHHHHHHHHHC
T ss_pred HHHHHHHHHHHHHHccHHHHHHHHHHHHhhCC---------------CCcHHHHHHHHHHHHcCCHHHHHHHHHHHHHhC
Confidence 44566789999999999999999999999732 236789999999999999999999999999999
Q ss_pred CCCc
Q 011164 479 KFLL 482 (492)
Q Consensus 479 p~n~ 482 (492)
|++.
T Consensus 135 ~~~~ 138 (151)
T 3gyz_A 135 NDEK 138 (151)
T ss_dssp CCHH
T ss_pred CCHH
Confidence 8753
No 109
>3fp2_A TPR repeat-containing protein YHR117W; TOM71, mitochondria translocation, allosteric REG phosphoprotein, TPR repeat, ATP-binding; 1.98A {Saccharomyces cerevisiae} PDB: 3fp3_A 3fp4_A 3lca_A
Probab=98.15 E-value=9.9e-07 Score=91.54 Aligned_cols=88 Identities=19% Similarity=0.199 Sum_probs=78.1
Q ss_pred CCCCChHHHHHHHHHHHHhhhHHHHcccHHHHHHHHHHHHHHhcccCCCChHHHHHHHHHHHHhHhHHHHHHHHhcCHHH
Q 011164 387 SWDMNTEEKIEAAGKKKEQGNTLFKAGKYARASKRYEKAVKYIEYDTSFGDEEKKQAKALKVACNLNNAACKLKLKDYKQ 466 (492)
Q Consensus 387 ~~~~~~~e~l~~a~~~K~~Gn~~fk~~~~~~A~~~Y~~al~~l~~~~~~~~~~~~~~~~~~~~l~~N~a~~~lk~~~~~~ 466 (492)
...++.++..+.+..+...|+.++++|+|.+|+..|+++++.-. ....++.|+|.|++++++|++
T Consensus 13 ~~~~~~~~~~~~a~~~~~~g~~~~~~g~~~~A~~~~~~al~~~p---------------~~~~~~~~la~~~~~~g~~~~ 77 (537)
T 3fp2_A 13 LKGLSPSQRQAYAVQLKNRGNHFFTAKNFNEAIKYYQYAIELDP---------------NEPVFYSNISACYISTGDLEK 77 (537)
T ss_dssp HTTSCHHHHHHHHHHHHHHHHHHHHTTCCC-CHHHHHHHHHHCT---------------TCHHHHHHHHHHHHHHTCHHH
T ss_pred hcCCCcchhHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHhhCC---------------CCcHHHHHHHHHHHHcCCHHH
Confidence 44678888999999999999999999999999999999998732 236889999999999999999
Q ss_pred HHHHHHHHHhcCCCCccceeeee
Q 011164 467 AEKLCTKVQQQKKFLLLPIFNIY 489 (492)
Q Consensus 467 ai~~~~~al~~dp~n~KA~~r~~ 489 (492)
|+..++++++++|++..++++..
T Consensus 78 A~~~~~~al~~~p~~~~~~~~la 100 (537)
T 3fp2_A 78 VIEFTTKALEIKPDHSKALLRRA 100 (537)
T ss_dssp HHHHHHHHHHHCTTCHHHHHHHH
T ss_pred HHHHHHHHHhcCCchHHHHHHHH
Confidence 99999999999999999887654
No 110
>2vyi_A SGTA protein; chaperone, TPR repeat, phosphoprotein, tetratricopeptide repeat protein, HOST-virus interaction; 2.4A {Homo sapiens} SCOP: k.38.1.1
Probab=98.14 E-value=2.5e-06 Score=69.78 Aligned_cols=93 Identities=14% Similarity=0.010 Sum_probs=52.8
Q ss_pred HHHHHHHHHHHhhhHHHHcccHHHHHHHHHHHHHHhcccC-------------CCChHHHHH------HHHHHHHhHhHH
Q 011164 394 EKIEAAGKKKEQGNTLFKAGKYARASKRYEKAVKYIEYDT-------------SFGDEEKKQ------AKALKVACNLNN 454 (492)
Q Consensus 394 e~l~~a~~~K~~Gn~~fk~~~~~~A~~~Y~~al~~l~~~~-------------~~~~~~~~~------~~~~~~~l~~N~ 454 (492)
.....+..+...|..++..++|.+|+..|++++....... ...++.... ..+....++.++
T Consensus 7 ~~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~~ 86 (131)
T 2vyi_A 7 EDSAEAERLKTEGNEQMKVENFEAAVHFYGKAIELNPANAVYFCNRAAAYSKLGNYAGAVQDCERAICIDPAYSKAYGRM 86 (131)
T ss_dssp CHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHH
T ss_pred cchhhhHHHHHHHHHHHHccCHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHhhchHHHHHHHHHHHhcCccCHHHHHHH
Confidence 3455677788888888888999999999888887632110 000000000 011123355556
Q ss_pred HHHHHHhcCHHHHHHHHHHHHhcCCCCcccee
Q 011164 455 AACKLKLKDYKQAEKLCTKVQQQKKFLLLPIF 486 (492)
Q Consensus 455 a~~~lk~~~~~~ai~~~~~al~~dp~n~KA~~ 486 (492)
|.++.++++|++|+..+.++++++|++..+++
T Consensus 87 ~~~~~~~~~~~~A~~~~~~~~~~~p~~~~~~~ 118 (131)
T 2vyi_A 87 GLALSSLNKHVEAVAYYKKALELDPDNETYKS 118 (131)
T ss_dssp HHHHHHTTCHHHHHHHHHHHHHHSTTCHHHHH
T ss_pred HHHHHHhCCHHHHHHHHHHHHhcCccchHHHH
Confidence 66666666666666666666666665554443
No 111
>3k9i_A BH0479 protein; putative protein binding protein, structural genomics, joint for structural genomics, JCSG; 2.71A {Bacillus halodurans}
Probab=98.13 E-value=3.7e-06 Score=68.63 Aligned_cols=73 Identities=21% Similarity=0.126 Sum_probs=63.4
Q ss_pred HHHHHHHHhhhHHHHcccHHHHHHHHHHHHHHhcccCCCChHHHHHHHHHHHHhHhHHHHHHHHhcCHHHHHHHHHHHHh
Q 011164 397 EAAGKKKEQGNTLFKAGKYARASKRYEKAVKYIEYDTSFGDEEKKQAKALKVACNLNNAACKLKLKDYKQAEKLCTKVQQ 476 (492)
Q Consensus 397 ~~a~~~K~~Gn~~fk~~~~~~A~~~Y~~al~~l~~~~~~~~~~~~~~~~~~~~l~~N~a~~~lk~~~~~~ai~~~~~al~ 476 (492)
..+..+...|..+++.|+|.+|+..|+++++.-. ....++.|+|.|+.++|+|++|+..+.++++
T Consensus 25 ~~~~~~~~lg~~~~~~~~~~~A~~~~~~al~~~p---------------~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~ 89 (117)
T 3k9i_A 25 DLAECYLGLGSTFRTLGEYRKAEAVLANGVKQFP---------------NHQALRVFYAMVLYNLGRYEQGVELLLKIIA 89 (117)
T ss_dssp HHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCT---------------TCHHHHHHHHHHHHHHTCHHHHHHHHHHHHH
T ss_pred cHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCC---------------CchHHHHHHHHHHHHcCCHHHHHHHHHHHHH
Confidence 3456678899999999999999999999998732 2267899999999999999999999999999
Q ss_pred cCCCCccc
Q 011164 477 QKKFLLLP 484 (492)
Q Consensus 477 ~dp~n~KA 484 (492)
.+|++...
T Consensus 90 ~~p~~~~~ 97 (117)
T 3k9i_A 90 ETSDDETI 97 (117)
T ss_dssp HHCCCHHH
T ss_pred hCCCcHHH
Confidence 99987643
No 112
>3rkv_A Putative peptidylprolyl isomerase; structural genomics, APC102156, PSI-biology, midwest center structural genomics, MCSG; 2.41A {Caenorhabditis elegans}
Probab=98.12 E-value=1.2e-06 Score=75.92 Aligned_cols=73 Identities=8% Similarity=0.044 Sum_probs=64.0
Q ss_pred HHHHHHHhhhHHHHcccHHHHHHHHHHHHHHhcccCCCChHHHHHHHHHHHHhHhHHHHHHHHhcCHHHHHHHHHHHHhc
Q 011164 398 AAGKKKEQGNTLFKAGKYARASKRYEKAVKYIEYDTSFGDEEKKQAKALKVACNLNNAACKLKLKDYKQAEKLCTKVQQQ 477 (492)
Q Consensus 398 ~a~~~K~~Gn~~fk~~~~~~A~~~Y~~al~~l~~~~~~~~~~~~~~~~~~~~l~~N~a~~~lk~~~~~~ai~~~~~al~~ 477 (492)
.+..+...|..+++.|+|.+|+..|++++++ .+....+|.++|.|++++++|++|+.++.++|++
T Consensus 62 ~~~~~~nla~~~~~~~~~~~A~~~~~~al~~---------------~p~~~~a~~~~g~~~~~~g~~~~A~~~~~~al~l 126 (162)
T 3rkv_A 62 NIPLYANMSQCYLNIGDLHEAEETSSEVLKR---------------EETNEKALFRRAKARIAAWKLDEAEEDLKLLLRN 126 (162)
T ss_dssp HHHHHHHHHHHHHHHTCHHHHHHHHHHHHHH---------------STTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhcCcHHHHHHHHHHHHhc---------------CCcchHHHHHHHHHHHHHhcHHHHHHHHHHHHhc
Confidence 4556778899999999999999999999987 2234778999999999999999999999999999
Q ss_pred CCCCccce
Q 011164 478 KKFLLLPI 485 (492)
Q Consensus 478 dp~n~KA~ 485 (492)
+|+|..++
T Consensus 127 ~p~~~~~~ 134 (162)
T 3rkv_A 127 HPAAASVV 134 (162)
T ss_dssp CGGGHHHH
T ss_pred CCCCHHHH
Confidence 99987443
No 113
>4gyw_A UDP-N-acetylglucosamine--peptide N- acetylglucosaminyltransferase 110 kDa subunit...; GT-B, glycosyltransferase, glcnacylation, transferase-peptid; HET: UDP NAG; 1.70A {Homo sapiens} PDB: 3pe3_A* 3pe4_A* 4ay5_A* 4ay6_A* 3tax_A* 4gyy_A* 4gz3_A* 4gz5_A* 4gz6_A*
Probab=98.10 E-value=1.4e-06 Score=94.58 Aligned_cols=93 Identities=15% Similarity=0.033 Sum_probs=59.4
Q ss_pred HHHHHHHHhhhHHHHcccHHHHHHHHHHHHHHhcccC-------------CCChHHH------HHHHHHHHHhHhHHHHH
Q 011164 397 EAAGKKKEQGNTLFKAGKYARASKRYEKAVKYIEYDT-------------SFGDEEK------KQAKALKVACNLNNAAC 457 (492)
Q Consensus 397 ~~a~~~K~~Gn~~fk~~~~~~A~~~Y~~al~~l~~~~-------------~~~~~~~------~~~~~~~~~l~~N~a~~ 457 (492)
..+..+...|+.+.++|+|++|+..|++||++-.... ...++.. -++++....+|+|+|.+
T Consensus 7 ~~a~al~nLG~~~~~~G~~~eAi~~~~kAl~l~P~~~~a~~nLg~~l~~~g~~~eA~~~~~~Al~l~P~~~~a~~nLg~~ 86 (723)
T 4gyw_A 7 THADSLNNLANIKREQGNIEEAVRLYRKALEVFPEFAAAHSNLASVLQQQGKLQEALMHYKEAIRISPTFADAYSNMGNT 86 (723)
T ss_dssp HHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCSCCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHH
T ss_pred CcHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHH
Confidence 4567778888888888888888888888887632110 0000000 11122334567777777
Q ss_pred HHHhcCHHHHHHHHHHHHhcCCCCccceeeee
Q 011164 458 KLKLKDYKQAEKLCTKVQQQKKFLLLPIFNIY 489 (492)
Q Consensus 458 ~lk~~~~~~ai~~~~~al~~dp~n~KA~~r~~ 489 (492)
+.++++|++|+..+++||+++|++..|++++.
T Consensus 87 l~~~g~~~~A~~~~~kAl~l~P~~~~a~~~Lg 118 (723)
T 4gyw_A 87 LKEMQDVQGALQCYTRAIQINPAFADAHSNLA 118 (723)
T ss_dssp HHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHH
T ss_pred HHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHH
Confidence 77777777777777777777777777766543
No 114
>3ma5_A Tetratricopeptide repeat domain protein; NESG, structural genomics, PSI-2, protein structure initiative; 2.80A {Salinibacter ruber} PDB: 2kcl_A 2kcv_A
Probab=98.10 E-value=2.1e-06 Score=68.21 Aligned_cols=69 Identities=12% Similarity=-0.055 Sum_probs=59.3
Q ss_pred HHHHHHhhhHHHHcccHHHHHHHHHHHHHHhcccCCCChHHHHHHHHHHHHhHhHHHHHHHHhcCHHHHHHHHHHHHhcC
Q 011164 399 AGKKKEQGNTLFKAGKYARASKRYEKAVKYIEYDTSFGDEEKKQAKALKVACNLNNAACKLKLKDYKQAEKLCTKVQQQK 478 (492)
Q Consensus 399 a~~~K~~Gn~~fk~~~~~~A~~~Y~~al~~l~~~~~~~~~~~~~~~~~~~~l~~N~a~~~lk~~~~~~ai~~~~~al~~d 478 (492)
+..+...|..+++.|+|.+|+..|+++++.-. ....++.|+|.|+.++++|++|+..+.+++++.
T Consensus 7 ~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~p---------------~~~~a~~~lg~~~~~~g~~~~A~~~~~~al~l~ 71 (100)
T 3ma5_A 7 PFTRYALAQEHLKHDNASRALALFEELVETDP---------------DYVGTYYHLGKLYERLDRTDDAIDTYAQGIEVA 71 (100)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHST---------------TCTHHHHHHHHHHHHTTCHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCC---------------CcHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhh
Confidence 34567889999999999999999999998722 235689999999999999999999999999997
Q ss_pred CCCc
Q 011164 479 KFLL 482 (492)
Q Consensus 479 p~n~ 482 (492)
|.+.
T Consensus 72 ~~~~ 75 (100)
T 3ma5_A 72 REEG 75 (100)
T ss_dssp HHHS
T ss_pred hcCC
Confidence 7543
No 115
>2kck_A TPR repeat; tetratricopeptide repeat, structural genomics, unknown function, PSI-2, protein structure initiative; NMR {Methanococcus maripaludis}
Probab=98.10 E-value=1.4e-06 Score=69.42 Aligned_cols=73 Identities=16% Similarity=0.092 Sum_probs=57.0
Q ss_pred HHHHhhhHHHHcccHHHHHHHHHHHHHHhcccCCCChHHHHHHHHHHHHhHhHHHHHHHHhcCHHHHHHHHHHHHhcCCC
Q 011164 401 KKKEQGNTLFKAGKYARASKRYEKAVKYIEYDTSFGDEEKKQAKALKVACNLNNAACKLKLKDYKQAEKLCTKVQQQKKF 480 (492)
Q Consensus 401 ~~K~~Gn~~fk~~~~~~A~~~Y~~al~~l~~~~~~~~~~~~~~~~~~~~l~~N~a~~~lk~~~~~~ai~~~~~al~~dp~ 480 (492)
.+...|..+++.++|.+|+..|+++++.... ...++.|+|.+++++++|++|+..++++++++|+
T Consensus 8 ~~~~~~~~~~~~~~~~~A~~~~~~a~~~~~~---------------~~~~~~~~a~~~~~~~~~~~A~~~~~~a~~~~~~ 72 (112)
T 2kck_A 8 EYYLEGVLQYDAGNYTESIDLFEKAIQLDPE---------------ESKYWLMKGKALYNLERYEEAVDCYNYVINVIED 72 (112)
T ss_dssp GGGGHHHHHHSSCCHHHHHHHHHHHHHHCCC---------------CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHTSCC
T ss_pred HHHHHHHHHHHhhhHHHHHHHHHHHHHhCcC---------------CHHHHHHHHHHHHHccCHHHHHHHHHHHHHhCcc
Confidence 3456778888889999999999998876321 1456788888888888888888888888888888
Q ss_pred --Cccceeee
Q 011164 481 --LLLPIFNI 488 (492)
Q Consensus 481 --n~KA~~r~ 488 (492)
+..+++++
T Consensus 73 ~~~~~~~~~l 82 (112)
T 2kck_A 73 EYNKDVWAAK 82 (112)
T ss_dssp TTCHHHHHHH
T ss_pred cchHHHHHHH
Confidence 77766654
No 116
>4gcn_A Protein STI-1; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, tetratricopeptide repeat domain; HET: PGE; 1.85A {Caenorhabditis elegans}
Probab=98.08 E-value=1.9e-05 Score=65.60 Aligned_cols=74 Identities=15% Similarity=0.037 Sum_probs=62.0
Q ss_pred HHHHHHhhhHHHHcccHHHHHHHHHHHHHHhcccCCCChHHHHHHHHHHHHhHhHHHHHHHHhcCHHHHHHHHHHHHhcC
Q 011164 399 AGKKKEQGNTLFKAGKYARASKRYEKAVKYIEYDTSFGDEEKKQAKALKVACNLNNAACKLKLKDYKQAEKLCTKVQQQK 478 (492)
Q Consensus 399 a~~~K~~Gn~~fk~~~~~~A~~~Y~~al~~l~~~~~~~~~~~~~~~~~~~~l~~N~a~~~lk~~~~~~ai~~~~~al~~d 478 (492)
+..+...|..+++.|+|.+|+..|++++++-...... ......+|.|++.|+.++++|++|+..+.++|..+
T Consensus 42 ~~~~~nlg~~~~~~~~~~~A~~~~~~al~~~~~~~~~--------~~~~a~~~~~lg~~~~~~~~~~~A~~~~~kal~~~ 113 (127)
T 4gcn_A 42 ITFYNNKAAVYFEEKKFAECVQFCEKAVEVGRETRAD--------YKLIAKAMSRAGNAFQKQNDLSLAVQWFHRSLSEF 113 (127)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCC--------HHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHS
T ss_pred HHHHHhHHHHHHHhhhHHHHHHHHHHHHHhCcccchh--------hHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhC
Confidence 4456789999999999999999999999874432211 34557789999999999999999999999999998
Q ss_pred CC
Q 011164 479 KF 480 (492)
Q Consensus 479 p~ 480 (492)
|+
T Consensus 114 ~~ 115 (127)
T 4gcn_A 114 RD 115 (127)
T ss_dssp CC
T ss_pred cC
Confidence 75
No 117
>1wao_1 Serine/threonine protein phosphatase 5; hydrolase, protein-protein interactions, TPR, super-helix,; 2.9A {Homo sapiens} SCOP: a.118.8.1 d.159.1.3
Probab=98.07 E-value=6.2e-07 Score=92.81 Aligned_cols=75 Identities=24% Similarity=0.220 Sum_probs=38.6
Q ss_pred HHHHHHHhhhHHHHcccHHHHHHHHHHHHHHhcccCCCChHHHHHHHHHHHHhHhHHHHHHHHhcCHHHHHHHHHHHHhc
Q 011164 398 AAGKKKEQGNTLFKAGKYARASKRYEKAVKYIEYDTSFGDEEKKQAKALKVACNLNNAACKLKLKDYKQAEKLCTKVQQQ 477 (492)
Q Consensus 398 ~a~~~K~~Gn~~fk~~~~~~A~~~Y~~al~~l~~~~~~~~~~~~~~~~~~~~l~~N~a~~~lk~~~~~~ai~~~~~al~~ 477 (492)
.+..+...|+.++++|+|.+|+..|++|++.-.. ...++.|+|.|++++++|++|+.++++|+++
T Consensus 5 ~a~~~~~lg~~~~~~g~~~~A~~~~~~Al~~~p~---------------~~~~~~~lg~~~~~~g~~~~A~~~~~~al~l 69 (477)
T 1wao_1 5 RAEELKTQANDYFKAKDYENAIKFYSQAIELNPS---------------NAIYYGNRSLAYLRTECYGYALGDATRAIEL 69 (477)
T ss_dssp HHTTSSSSSSSTTTTTCHHHHHHHHHHHHHHCTT---------------CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHS
T ss_pred HHHHHHHHHHHHHHhCCHHHHHHHHHHHHHhCCc---------------cHHHHHHHHHHHHHhcCHHHHHHHHHHHHHh
Confidence 4455556666666666666666666666654211 1334444444444444444444444444444
Q ss_pred CCCCccceee
Q 011164 478 KKFLLLPIFN 487 (492)
Q Consensus 478 dp~n~KA~~r 487 (492)
+|++.+++++
T Consensus 70 ~p~~~~~~~~ 79 (477)
T 1wao_1 70 DKKYIKGYYR 79 (477)
T ss_dssp CTTCHHHHHH
T ss_pred CCCCHHHHHH
Confidence 4444444443
No 118
>4i17_A Hypothetical protein; TPR repeats protein, structural genomics, joint center for S genomics, JCSG, protein structure initiative; HET: MSE; 1.83A {Bacteroides fragilis}
Probab=98.06 E-value=2.6e-06 Score=78.11 Aligned_cols=75 Identities=21% Similarity=0.289 Sum_probs=53.1
Q ss_pred HHHHHhhhHHHHcccHHHHHHHHHHHHHHhcccCCCChHHHHHHHHHHHHhHhHHHHHHHHhcCHHHHHHHHHHHHhcCC
Q 011164 400 GKKKEQGNTLFKAGKYARASKRYEKAVKYIEYDTSFGDEEKKQAKALKVACNLNNAACKLKLKDYKQAEKLCTKVQQQKK 479 (492)
Q Consensus 400 ~~~K~~Gn~~fk~~~~~~A~~~Y~~al~~l~~~~~~~~~~~~~~~~~~~~l~~N~a~~~lk~~~~~~ai~~~~~al~~dp 479 (492)
..+...|+.+++.|+|.+|+..|+++++.... ....++.|+|.|+.++++|++|+.++.++++++|
T Consensus 8 ~~~~~~g~~~~~~~~~~~A~~~~~~al~~~~~--------------~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~~~p 73 (228)
T 4i17_A 8 NQLKNEGNDALNAKNYAVAFEKYSEYLKLTNN--------------QDSVTAYNCGVCADNIKKYKEAADYFDIAIKKNY 73 (228)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHHHTTT--------------CCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHTTC
T ss_pred HHHHHHHHHHHHccCHHHHHHHHHHHHhccCC--------------CCcHHHHHHHHHHHHhhcHHHHHHHHHHHHHhCc
Confidence 46778999999999999999999999987420 0124555666666666666666666666666666
Q ss_pred CCccceeee
Q 011164 480 FLLLPIFNI 488 (492)
Q Consensus 480 ~n~KA~~r~ 488 (492)
++..+++++
T Consensus 74 ~~~~~~~~l 82 (228)
T 4i17_A 74 NLANAYIGK 82 (228)
T ss_dssp SHHHHHHHH
T ss_pred chHHHHHHH
Confidence 666655543
No 119
>1elr_A TPR2A-domain of HOP; HOP, TPR-domain, peptide-complex, helical repeat, protein binding, chaperone; 1.90A {Homo sapiens} SCOP: a.118.8.1 PDB: 3esk_A 3fwv_A
Probab=98.06 E-value=2.3e-06 Score=70.15 Aligned_cols=76 Identities=28% Similarity=0.328 Sum_probs=65.1
Q ss_pred HHHHHHHhhhHHHHcccHHHHHHHHHHHHHHhcccCCCChHHHHHHHHHHHHhHhHHHHHHHHhcCHHHHHHHHHHHHhc
Q 011164 398 AAGKKKEQGNTLFKAGKYARASKRYEKAVKYIEYDTSFGDEEKKQAKALKVACNLNNAACKLKLKDYKQAEKLCTKVQQQ 477 (492)
Q Consensus 398 ~a~~~K~~Gn~~fk~~~~~~A~~~Y~~al~~l~~~~~~~~~~~~~~~~~~~~l~~N~a~~~lk~~~~~~ai~~~~~al~~ 477 (492)
.+..+...|..+++.|+|.+|+..|++++..... ...++.|+|.|++++++|++|+..+.+++.+
T Consensus 3 ~~~~~~~l~~~~~~~~~~~~A~~~~~~a~~~~~~---------------~~~~~~~la~~~~~~~~~~~A~~~~~~~~~~ 67 (131)
T 1elr_A 3 QALKEKELGNDAYKKKDFDTALKHYDKAKELDPT---------------NMTYITNQAAVYFEKGDYNKCRELCEKAIEV 67 (131)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTT---------------CHHHHHHHHHHHHHHTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHhcCHHHHHHHHHHHHhcCCc---------------cHHHHHHHHHHHHHhccHHHHHHHHHHHHhh
Confidence 4667889999999999999999999999987321 2578899999999999999999999999999
Q ss_pred CCCC-------ccceeee
Q 011164 478 KKFL-------LLPIFNI 488 (492)
Q Consensus 478 dp~n-------~KA~~r~ 488 (492)
+|++ ..+++++
T Consensus 68 ~~~~~~~~~~~~~~~~~l 85 (131)
T 1elr_A 68 GRENREDYRQIAKAYARI 85 (131)
T ss_dssp HHHSTTCHHHHHHHHHHH
T ss_pred ccccchhHHHHHHHHHHH
Confidence 8876 5555544
No 120
>2xev_A YBGF; tetratricopeptide, alpha-helical, metal binding; 1.57A {Xanthomonas campestris}
Probab=98.04 E-value=3.8e-06 Score=69.22 Aligned_cols=68 Identities=12% Similarity=0.070 Sum_probs=34.7
Q ss_pred HHHhhhHHHHcccHHHHHHHHHHHHHHhcccCCCChHHHHHHHHHHHHhHhHHHHHHHHhcCHHHHHHHHHHHHhcCCCC
Q 011164 402 KKEQGNTLFKAGKYARASKRYEKAVKYIEYDTSFGDEEKKQAKALKVACNLNNAACKLKLKDYKQAEKLCTKVQQQKKFL 481 (492)
Q Consensus 402 ~K~~Gn~~fk~~~~~~A~~~Y~~al~~l~~~~~~~~~~~~~~~~~~~~l~~N~a~~~lk~~~~~~ai~~~~~al~~dp~n 481 (492)
+...|..+++.|+|.+|+..|+++++..... .....++.++|.|++++++|++|+..+.++++.+|++
T Consensus 5 ~~~~a~~~~~~~~~~~A~~~~~~~~~~~p~~------------~~~~~~~~~lg~~~~~~~~~~~A~~~~~~~~~~~p~~ 72 (129)
T 2xev_A 5 AYNVAFDALKNGKYDDASQLFLSFLELYPNG------------VYTPNALYWLGESYYATRNFQLAEAQFRDLVSRYPTH 72 (129)
T ss_dssp HHHHHHHHHHTTCHHHHHHHHHHHHHHCSSS------------TTHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTS
T ss_pred HHHHHHHHHHhCCHHHHHHHHHHHHHHCCCC------------cccHHHHHHHHHHHHHhccHHHHHHHHHHHHHHCCCC
Confidence 3455666666666666666666666542211 0112344445555555555555555555555555544
No 121
>4ga2_A E3 SUMO-protein ligase ranbp2; TPR motif, nuclear pore complex component nucleocytoplasmic transport, transport protein; 0.95A {Pan troglodytes} PDB: 4ga0_A 4ga1_A*
Probab=98.04 E-value=1.5e-06 Score=74.77 Aligned_cols=69 Identities=12% Similarity=-0.059 Sum_probs=59.6
Q ss_pred hhHHHHcccHHHHHHHHHHHHHHhcccCCCChHHHHHHHHHHHHhHhHHHHHHHHhcCHHHHHHHHHHHHhcCCCCccce
Q 011164 406 GNTLFKAGKYARASKRYEKAVKYIEYDTSFGDEEKKQAKALKVACNLNNAACKLKLKDYKQAEKLCTKVQQQKKFLLLPI 485 (492)
Q Consensus 406 Gn~~fk~~~~~~A~~~Y~~al~~l~~~~~~~~~~~~~~~~~~~~l~~N~a~~~lk~~~~~~ai~~~~~al~~dp~n~KA~ 485 (492)
|+-+.+++++++|+..|++++.. .+.....+.++|.||+++++|++|+.+++++|+++|++..++
T Consensus 4 G~~~~~~~~~e~ai~~~~~a~~~---------------~p~~~~~~~~la~~y~~~~~~~~A~~~~~~al~~~p~~~~a~ 68 (150)
T 4ga2_A 4 GSMRRSKADVERYIASVQGSTPS---------------PRQKSIKGFYFAKLYYEAKEYDLAKKYICTYINVQERDPKAH 68 (150)
T ss_dssp ---CCCHHHHHHHHHHHHHHSCS---------------HHHHHTTHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHH
T ss_pred HHHHHHcChHHHHHHHHHHhccc---------------CcccHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHH
Confidence 56667789999999999999975 556677889999999999999999999999999999999998
Q ss_pred eeee
Q 011164 486 FNIY 489 (492)
Q Consensus 486 ~r~~ 489 (492)
+++.
T Consensus 69 ~~lg 72 (150)
T 4ga2_A 69 RFLG 72 (150)
T ss_dssp HHHH
T ss_pred HHHH
Confidence 8754
No 122
>1hxi_A PEX5, peroxisome targeting signal 1 receptor PEX5; alpha helical, transport protein; 1.60A {Trypanosoma brucei} SCOP: a.118.8.1
Probab=98.04 E-value=5.1e-06 Score=68.58 Aligned_cols=70 Identities=11% Similarity=-0.104 Sum_probs=55.3
Q ss_pred HHHHHHhhhHHHHcccHHHHHHHHHHHHHHhcccCCCChHHHHHHHHHHHHhHhHHHHHHHHhcCHHHHHHHHHHHHhcC
Q 011164 399 AGKKKEQGNTLFKAGKYARASKRYEKAVKYIEYDTSFGDEEKKQAKALKVACNLNNAACKLKLKDYKQAEKLCTKVQQQK 478 (492)
Q Consensus 399 a~~~K~~Gn~~fk~~~~~~A~~~Y~~al~~l~~~~~~~~~~~~~~~~~~~~l~~N~a~~~lk~~~~~~ai~~~~~al~~d 478 (492)
+..+...|..+++.|++.+|+..|+++++.- +....++.|+|.|+.+++++++|+..+.++++++
T Consensus 51 ~~a~~~lg~~~~~~g~~~~A~~~~~~al~l~---------------P~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~ 115 (121)
T 1hxi_A 51 EEAWRSLGLTQAENEKDGLAIIALNHARMLD---------------PKDIAVHAALAVSHTNEHNANAALASLRAWLLSQ 115 (121)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHC---------------TTCHHHHHHHHHHHHHHHHHHHHHHHHHHHHC--
T ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHHhC---------------CCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhC
Confidence 3456678999999999999999999999872 2236688999999999999999999999999999
Q ss_pred CCCcc
Q 011164 479 KFLLL 483 (492)
Q Consensus 479 p~n~K 483 (492)
|++.+
T Consensus 116 P~~~~ 120 (121)
T 1hxi_A 116 PQYEQ 120 (121)
T ss_dssp -----
T ss_pred cCCCC
Confidence 98764
No 123
>1zu2_A Mitochondrial import receptor subunit TOM20-3; TPR, tetratricopeptide repeat like, TPR-like, transport protein; NMR {Arabidopsis thaliana} SCOP: a.118.8.1
Probab=98.04 E-value=3.8e-06 Score=72.54 Aligned_cols=70 Identities=11% Similarity=0.148 Sum_probs=58.2
Q ss_pred HHHHHHHhhhHHHHcccH----------HHHHHHHHHHHHHhcccCCCChHHHHHHHHHHHHhHhHHHHHHHHhc-----
Q 011164 398 AAGKKKEQGNTLFKAGKY----------ARASKRYEKAVKYIEYDTSFGDEEKKQAKALKVACNLNNAACKLKLK----- 462 (492)
Q Consensus 398 ~a~~~K~~Gn~~fk~~~~----------~~A~~~Y~~al~~l~~~~~~~~~~~~~~~~~~~~l~~N~a~~~lk~~----- 462 (492)
.+..+...|+.+.+.+++ ++|+..|++||++ ++....+|+|++.+|.+++
T Consensus 35 ~aea~~n~G~~l~~l~~~~~g~~al~~~~eAi~~le~AL~l---------------dP~~~~A~~~LG~ay~~lg~l~P~ 99 (158)
T 1zu2_A 35 DADNLTRWGGVLLELSQFHSISDAKQMIQEAITKFEEALLI---------------DPKKDEAVWCIGNAYTSFAFLTPD 99 (158)
T ss_dssp CHHHHHHHHHHHHHHHHHSCHHHHHHHHHHHHHHHHHHHHH---------------CTTCHHHHHHHHHHHHHHHHHCCC
T ss_pred CHHHHHHHHHHHHHhcccchhhhhHhHHHHHHHHHHHHHHh---------------CcCcHHHHHHHHHHHHHhcccCcc
Confidence 344566788877777665 5999999999987 4445888999999999985
Q ss_pred ------CHHHHHHHHHHHHhcCCCCc
Q 011164 463 ------DYKQAEKLCTKVQQQKKFLL 482 (492)
Q Consensus 463 ------~~~~ai~~~~~al~~dp~n~ 482 (492)
+|++|+.++++||+++|+|.
T Consensus 100 ~~~a~g~~~eA~~~~~kAl~l~P~~~ 125 (158)
T 1zu2_A 100 ETEAKHNFDLATQFFQQAVDEQPDNT 125 (158)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHCTTCH
T ss_pred hhhhhccHHHHHHHHHHHHHhCCCCH
Confidence 89999999999999999874
No 124
>2gw1_A Mitochondrial precursor proteins import receptor; TPR, protein transport; 3.00A {Saccharomyces cerevisiae}
Probab=98.04 E-value=4.2e-06 Score=86.07 Aligned_cols=79 Identities=27% Similarity=0.280 Sum_probs=70.4
Q ss_pred HHHHHHHHHHhhhHHHHcccHHHHHHHHHHHHHHhcccCCCChHHHHHHHHHHHHhHhHHHHHHHHhcCHHHHHHHHHHH
Q 011164 395 KIEAAGKKKEQGNTLFKAGKYARASKRYEKAVKYIEYDTSFGDEEKKQAKALKVACNLNNAACKLKLKDYKQAEKLCTKV 474 (492)
Q Consensus 395 ~l~~a~~~K~~Gn~~fk~~~~~~A~~~Y~~al~~l~~~~~~~~~~~~~~~~~~~~l~~N~a~~~lk~~~~~~ai~~~~~a 474 (492)
+.+.+..++..|+.+++.|+|.+|+..|+++++.-. ...++.++|.|++++++|++|+..++++
T Consensus 2 ~~~~a~~~~~~g~~~~~~g~~~~A~~~~~~al~~~p----------------~~~~~~~la~~~~~~g~~~~A~~~~~~a 65 (514)
T 2gw1_A 2 KDKYALALKDKGNQFFRNKKYDDAIKYYNWALELKE----------------DPVFYSNLSACYVSVGDLKKVVEMSTKA 65 (514)
T ss_dssp HHHHHHHHHHHHHHHHHTSCHHHHHHHHHHHHHHCC----------------CHHHHHHHHHHHHHHTCHHHHHHHHHHH
T ss_pred cchhHHHHHHHHHHHHHhccHHHHHHHHHHHHhcCc----------------cHHHHHhHHHHHHHHhhHHHHHHHHHHH
Confidence 457789999999999999999999999999998631 1568999999999999999999999999
Q ss_pred HhcCCCCccceeeee
Q 011164 475 QQQKKFLLLPIFNIY 489 (492)
Q Consensus 475 l~~dp~n~KA~~r~~ 489 (492)
++++|++..+++++.
T Consensus 66 l~~~p~~~~~~~~l~ 80 (514)
T 2gw1_A 66 LELKPDYSKVLLRRA 80 (514)
T ss_dssp HHHCSCCHHHHHHHH
T ss_pred hccChHHHHHHHHHH
Confidence 999999998887654
No 125
>2vgx_A Chaperone SYCD; alternative dimer assembly, tetratricopeptide repeat, type III secretion; HET: MLY; 1.95A {Yersinia enterocolitica} SCOP: k.38.1.1 PDB: 2vgx_B* 2vgy_A*
Probab=98.03 E-value=7e-06 Score=70.35 Aligned_cols=70 Identities=16% Similarity=0.020 Sum_probs=60.4
Q ss_pred HHHHHhhhHHHHcccHHHHHHHHHHHHHHhcccCCCChHHHHHHHHHHHHhHhHHHHHHHHhcCHHHHHHHHHHHHhcCC
Q 011164 400 GKKKEQGNTLFKAGKYARASKRYEKAVKYIEYDTSFGDEEKKQAKALKVACNLNNAACKLKLKDYKQAEKLCTKVQQQKK 479 (492)
Q Consensus 400 ~~~K~~Gn~~fk~~~~~~A~~~Y~~al~~l~~~~~~~~~~~~~~~~~~~~l~~N~a~~~lk~~~~~~ai~~~~~al~~dp 479 (492)
..+...|..+++.|+|.+|+..|++++..-. ....++.|+|.|++++|++++|+..+.++++++|
T Consensus 56 ~~~~~lg~~~~~~g~~~~A~~~~~~al~l~p---------------~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~p 120 (148)
T 2vgx_A 56 RFFLGLGACRQAMGQYDLAIHSYSYGAVMDI---------------XEPRFPFHAAECLLQXGELAEAESGLFLAQELIA 120 (148)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHHHST---------------TCTHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHhhHHHHHHHHHHHHhcCC---------------CCchHHHHHHHHHHHcCCHHHHHHHHHHHHHHCc
Confidence 3456788999999999999999999998732 2356789999999999999999999999999999
Q ss_pred CCccc
Q 011164 480 FLLLP 484 (492)
Q Consensus 480 ~n~KA 484 (492)
+++..
T Consensus 121 ~~~~~ 125 (148)
T 2vgx_A 121 NXPEF 125 (148)
T ss_dssp TCGGG
T ss_pred CCCcc
Confidence 87643
No 126
>3upv_A Heat shock protein STI1; TPR-fold, adaptor protein for HSP70 and HSP90, C-terminal PA HSP70, peptide binding protein; 1.60A {Saccharomyces cerevisiae}
Probab=98.01 E-value=5.3e-06 Score=68.40 Aligned_cols=72 Identities=15% Similarity=0.093 Sum_probs=62.1
Q ss_pred HHHHHHhhhHHHHcccHHHHHHHHHHHHHHhcccCCCChHHHHHHHHHHHHhHhHHHHHHHHhcCHHHHHHHHHHHHhcC
Q 011164 399 AGKKKEQGNTLFKAGKYARASKRYEKAVKYIEYDTSFGDEEKKQAKALKVACNLNNAACKLKLKDYKQAEKLCTKVQQQK 478 (492)
Q Consensus 399 a~~~K~~Gn~~fk~~~~~~A~~~Y~~al~~l~~~~~~~~~~~~~~~~~~~~l~~N~a~~~lk~~~~~~ai~~~~~al~~d 478 (492)
+..+...|..+++.|+|.+|+..|+++++.-. ....++.|+|.|+.++++|++|+.++.++++++
T Consensus 38 ~~~~~~~a~~~~~~~~~~~A~~~~~~al~~~p---------------~~~~~~~~lg~~~~~~~~~~~A~~~~~~al~~~ 102 (126)
T 3upv_A 38 ARGYSNRAAALAKLMSFPEAIADCNKAIEKDP---------------NFVRAYIRKATAQIAVKEYASALETLDAARTKD 102 (126)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCT---------------TCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHH
T ss_pred hHHHHHHHHHHHHhcCHHHHHHHHHHHHHhCC---------------CcHHHHHHHHHHHHHHhCHHHHHHHHHHHHHhC
Confidence 34567889999999999999999999998722 236789999999999999999999999999999
Q ss_pred ------CCCccce
Q 011164 479 ------KFLLLPI 485 (492)
Q Consensus 479 ------p~n~KA~ 485 (492)
|++..++
T Consensus 103 p~~~~~p~~~~~~ 115 (126)
T 3upv_A 103 AEVNNGSSAREID 115 (126)
T ss_dssp HHHHTTTTHHHHH
T ss_pred cccCCchhHHHHH
Confidence 8776543
No 127
>3vtx_A MAMA; tetratricopeptide repeats (TPR) containing protein, peptide protein, protein binding; 1.75A {Candidatus magnetobacterium bavaricum} PDB: 3vty_A
Probab=97.99 E-value=5e-06 Score=73.33 Aligned_cols=74 Identities=14% Similarity=0.048 Sum_probs=58.4
Q ss_pred HHHHHHhhhHHHHcccHHHHHHHHHHHHHHhcccCCCChHHHHHHHHHHHHhHhHHHHHHHHhcCHHHHHHHHHHHHhcC
Q 011164 399 AGKKKEQGNTLFKAGKYARASKRYEKAVKYIEYDTSFGDEEKKQAKALKVACNLNNAACKLKLKDYKQAEKLCTKVQQQK 478 (492)
Q Consensus 399 a~~~K~~Gn~~fk~~~~~~A~~~Y~~al~~l~~~~~~~~~~~~~~~~~~~~l~~N~a~~~lk~~~~~~ai~~~~~al~~d 478 (492)
+..+...|+.++++|+|++|+..|+++++.- +....++.++|.|+.++++|++|+..+.+++..+
T Consensus 5 ~~iy~~lG~~~~~~g~~~~A~~~~~~al~~~---------------p~~~~~~~~la~~~~~~~~~~~a~~~~~~~~~~~ 69 (184)
T 3vtx_A 5 TTIYMDIGDKKRTKGDFDGAIRAYKKVLKAD---------------PNNVETLLKLGKTYMDIGLPNDAIESLKKFVVLD 69 (184)
T ss_dssp HHHHHHHHHHHHHHTCHHHHHHHHHHHHHHC---------------TTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHC
T ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHHhC---------------CCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHhcC
Confidence 4456788999999999999999999999872 2235677788888888888888888888888888
Q ss_pred CCCccceee
Q 011164 479 KFLLLPIFN 487 (492)
Q Consensus 479 p~n~KA~~r 487 (492)
|++..+++.
T Consensus 70 ~~~~~~~~~ 78 (184)
T 3vtx_A 70 TTSAEAYYI 78 (184)
T ss_dssp CCCHHHHHH
T ss_pred chhHHHHHH
Confidence 777666543
No 128
>2xcb_A PCRH, regulatory protein PCRH; protein transport, bacterial toxin, type III secretion, protein binding; 1.85A {Pseudomonas aeruginosa} PDB: 2xcc_A
Probab=97.98 E-value=7.3e-06 Score=69.38 Aligned_cols=70 Identities=17% Similarity=0.078 Sum_probs=60.3
Q ss_pred HHHHHhhhHHHHcccHHHHHHHHHHHHHHhcccCCCChHHHHHHHHHHHHhHhHHHHHHHHhcCHHHHHHHHHHHHhcCC
Q 011164 400 GKKKEQGNTLFKAGKYARASKRYEKAVKYIEYDTSFGDEEKKQAKALKVACNLNNAACKLKLKDYKQAEKLCTKVQQQKK 479 (492)
Q Consensus 400 ~~~K~~Gn~~fk~~~~~~A~~~Y~~al~~l~~~~~~~~~~~~~~~~~~~~l~~N~a~~~lk~~~~~~ai~~~~~al~~dp 479 (492)
..+...|..+++.|+|.+|+..|++++..-. ....++.|+|.|++++|+|++|+..+.++++++|
T Consensus 53 ~~~~~lg~~~~~~g~~~~A~~~~~~al~~~p---------------~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~p 117 (142)
T 2xcb_A 53 RYFLGLGACRQSLGLYEQALQSYSYGALMDI---------------NEPRFPFHAAECHLQLGDLDGAESGFYSARALAA 117 (142)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHHHCT---------------TCTHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhhHHHHHHHHHHHHhcCC---------------CCcHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCC
Confidence 3456788999999999999999999998732 2356789999999999999999999999999999
Q ss_pred CCccc
Q 011164 480 FLLLP 484 (492)
Q Consensus 480 ~n~KA 484 (492)
+++..
T Consensus 118 ~~~~~ 122 (142)
T 2xcb_A 118 AQPAH 122 (142)
T ss_dssp TCGGG
T ss_pred CCcch
Confidence 87643
No 129
>3k9i_A BH0479 protein; putative protein binding protein, structural genomics, joint for structural genomics, JCSG; 2.71A {Bacillus halodurans}
Probab=97.93 E-value=1.8e-06 Score=70.62 Aligned_cols=68 Identities=21% Similarity=0.059 Sum_probs=53.8
Q ss_pred HcccHHHHHHHHHHHHHHhcccCCCChHHHHHHHHHHHHhHhHHHHHHHHhcCHHHHHHHHHHHHhcCCCCccceeeeec
Q 011164 411 KAGKYARASKRYEKAVKYIEYDTSFGDEEKKQAKALKVACNLNNAACKLKLKDYKQAEKLCTKVQQQKKFLLLPIFNIYA 490 (492)
Q Consensus 411 k~~~~~~A~~~Y~~al~~l~~~~~~~~~~~~~~~~~~~~l~~N~a~~~lk~~~~~~ai~~~~~al~~dp~n~KA~~r~~~ 490 (492)
..|+|.+|+..|+++++.-.. .+....++.|+|.|++++++|++|+..+.++++++|++..+++++..
T Consensus 2 ~~g~~~~A~~~~~~al~~~~~------------~p~~~~~~~~lg~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~l~~ 69 (117)
T 3k9i_A 2 VLGLEAQAVPYYEKAIASGLQ------------GKDLAECYLGLGSTFRTLGEYRKAEAVLANGVKQFPNHQALRVFYAM 69 (117)
T ss_dssp -----CCCHHHHHHHHSSCCC------------HHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHH
T ss_pred CCCcHHHHHHHHHHHHHcCCC------------CccHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCchHHHHHHHH
Confidence 368899999999999974100 24567889999999999999999999999999999999988877543
No 130
>4gyw_A UDP-N-acetylglucosamine--peptide N- acetylglucosaminyltransferase 110 kDa subunit...; GT-B, glycosyltransferase, glcnacylation, transferase-peptid; HET: UDP NAG; 1.70A {Homo sapiens} PDB: 3pe3_A* 3pe4_A* 4ay5_A* 4ay6_A* 3tax_A* 4gyy_A* 4gz3_A* 4gz5_A* 4gz6_A*
Probab=97.93 E-value=4.7e-06 Score=90.41 Aligned_cols=92 Identities=14% Similarity=0.019 Sum_probs=66.2
Q ss_pred HHHHHHhhhHHHHcccHHHHHHHHHHHHHHhcccC-------------CCChHHH------HHHHHHHHHhHhHHHHHHH
Q 011164 399 AGKKKEQGNTLFKAGKYARASKRYEKAVKYIEYDT-------------SFGDEEK------KQAKALKVACNLNNAACKL 459 (492)
Q Consensus 399 a~~~K~~Gn~~fk~~~~~~A~~~Y~~al~~l~~~~-------------~~~~~~~------~~~~~~~~~l~~N~a~~~l 459 (492)
+..+...|+.+++.|+|.+|+..|++|+++-.... ...++.. -++++....+|+|+|.++.
T Consensus 43 ~~a~~nLg~~l~~~g~~~eA~~~~~~Al~l~P~~~~a~~nLg~~l~~~g~~~~A~~~~~kAl~l~P~~~~a~~~Lg~~~~ 122 (723)
T 4gyw_A 43 AAAHSNLASVLQQQGKLQEALMHYKEAIRISPTFADAYSNMGNTLKEMQDVQGALQCYTRAIQINPAFADAHSNLASIHK 122 (723)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHH
Confidence 34456778888888888888888888887532110 0000111 1123344678999999999
Q ss_pred HhcCHHHHHHHHHHHHhcCCCCccceeeeec
Q 011164 460 KLKDYKQAEKLCTKVQQQKKFLLLPIFNIYA 490 (492)
Q Consensus 460 k~~~~~~ai~~~~~al~~dp~n~KA~~r~~~ 490 (492)
++|++++|+..+++||+++|++..|++++..
T Consensus 123 ~~g~~~eAi~~~~~Al~l~P~~~~a~~~L~~ 153 (723)
T 4gyw_A 123 DSGNIPEAIASYRTALKLKPDFPDAYCNLAH 153 (723)
T ss_dssp HTTCHHHHHHHHHHHHHHCSCCHHHHHHHHH
T ss_pred HcCCHHHHHHHHHHHHHhCCCChHHHhhhhh
Confidence 9999999999999999999999999887643
No 131
>2pl2_A Hypothetical conserved protein TTC0263; TPR, protein binding; 2.50A {Thermus thermophilus}
Probab=97.93 E-value=3.5e-06 Score=77.16 Aligned_cols=75 Identities=19% Similarity=0.107 Sum_probs=66.0
Q ss_pred HHHHHhhhHHHHcccHHHHHHHHHHHHHHhcccCCCChHHHHHHHHHHHHhHhHHHHHHHHhcCHHHHHHHHHHHHhcCC
Q 011164 400 GKKKEQGNTLFKAGKYARASKRYEKAVKYIEYDTSFGDEEKKQAKALKVACNLNNAACKLKLKDYKQAEKLCTKVQQQKK 479 (492)
Q Consensus 400 ~~~K~~Gn~~fk~~~~~~A~~~Y~~al~~l~~~~~~~~~~~~~~~~~~~~l~~N~a~~~lk~~~~~~ai~~~~~al~~dp 479 (492)
..+...|..+++.|+|.+|+..|+++++.- +....++.|+|.++.+++++++|+..++++++++|
T Consensus 6 ~~~~~lg~~~~~~g~~~~A~~~~~~al~~~---------------p~~~~a~~~lg~~~~~~g~~~~A~~~~~~al~~~P 70 (217)
T 2pl2_A 6 QNPLRLGVQLYALGRYDAALTLFERALKEN---------------PQDPEALYWLARTQLKLGLVNPALENGKTLVARTP 70 (217)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHTTS---------------SSCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCT
T ss_pred HHHHHHHHHHHHcCCHHHHHHHHHHHHHhC---------------CCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCC
Confidence 456788999999999999999999999862 23477899999999999999999999999999999
Q ss_pred CCccceeeee
Q 011164 480 FLLLPIFNIY 489 (492)
Q Consensus 480 ~n~KA~~r~~ 489 (492)
++..+++++.
T Consensus 71 ~~~~a~~~lg 80 (217)
T 2pl2_A 71 RYLGGYMVLS 80 (217)
T ss_dssp TCHHHHHHHH
T ss_pred CcHHHHHHHH
Confidence 9998877643
No 132
>2pl2_A Hypothetical conserved protein TTC0263; TPR, protein binding; 2.50A {Thermus thermophilus}
Probab=97.91 E-value=6.9e-06 Score=75.14 Aligned_cols=73 Identities=14% Similarity=-0.022 Sum_probs=62.7
Q ss_pred HHHHhhhHHHHcccHHHHHHHHHHHHHHhcccCCCChHHHHHHHHHHHHhHhHHHHHHHHhcCHHHHHHHHHHHHhcCCC
Q 011164 401 KKKEQGNTLFKAGKYARASKRYEKAVKYIEYDTSFGDEEKKQAKALKVACNLNNAACKLKLKDYKQAEKLCTKVQQQKKF 480 (492)
Q Consensus 401 ~~K~~Gn~~fk~~~~~~A~~~Y~~al~~l~~~~~~~~~~~~~~~~~~~~l~~N~a~~~lk~~~~~~ai~~~~~al~~dp~ 480 (492)
.+...|..+++.|++.+|+..|+++++.- ....++.|+|.|+.++|+|++|+..++++++++|+
T Consensus 120 ~~~~lg~~~~~~g~~~~A~~~~~~al~~~----------------~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~P~ 183 (217)
T 2pl2_A 120 LHLQRGLVYALLGERDKAEASLKQALALE----------------DTPEIRSALAELYLSMGRLDEALAQYAKALEQAPK 183 (217)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHHHHHHHC----------------CCHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHSTT
T ss_pred HHHHHHHHHHHcCChHHHHHHHHHHHhcc----------------cchHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCC
Confidence 45567888889999999999999999862 12667899999999999999999999999999999
Q ss_pred Cccceeeee
Q 011164 481 LLLPIFNIY 489 (492)
Q Consensus 481 n~KA~~r~~ 489 (492)
+..+++++.
T Consensus 184 ~~~~~~~la 192 (217)
T 2pl2_A 184 DLDLRVRYA 192 (217)
T ss_dssp CHHHHHHHH
T ss_pred ChHHHHHHH
Confidence 998877653
No 133
>2yhc_A BAMD, UPF0169 lipoprotein YFIO; essential BAM component, membrane protein; 1.80A {Escherichia coli} PDB: 3tgo_A 3q5m_A
Probab=97.90 E-value=1.6e-05 Score=73.02 Aligned_cols=78 Identities=9% Similarity=0.050 Sum_probs=65.3
Q ss_pred HHHHHHhhhHHHHcccHHHHHHHHHHHHHHhcccCCCChHHHHHHHHHHHHhHhHHHHHHHHhcCHHHHHHHHHHHHhcC
Q 011164 399 AGKKKEQGNTLFKAGKYARASKRYEKAVKYIEYDTSFGDEEKKQAKALKVACNLNNAACKLKLKDYKQAEKLCTKVQQQK 478 (492)
Q Consensus 399 a~~~K~~Gn~~fk~~~~~~A~~~Y~~al~~l~~~~~~~~~~~~~~~~~~~~l~~N~a~~~lk~~~~~~ai~~~~~al~~d 478 (492)
+..+...|..++++|+|.+|+..|+++++..... .....++.++|.|++++++|++|+..++++++.+
T Consensus 4 ~~~~~~~a~~~~~~g~~~~A~~~~~~~~~~~p~~------------~~~~~a~~~lg~~~~~~~~~~~A~~~~~~~l~~~ 71 (225)
T 2yhc_A 4 PNEIYATAQQKLQDGNWRQAITQLEALDNRYPFG------------PYSQQVQLDLIYAYYKNADLPLAQAAIDRFIRLN 71 (225)
T ss_dssp HHHHHHHHHHHHHHTCHHHHHHHHHHHHHHCTTS------------TTHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHC
T ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCC------------hHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHC
Confidence 3456788999999999999999999999863321 1235688999999999999999999999999999
Q ss_pred CCCcc---ceeee
Q 011164 479 KFLLL---PIFNI 488 (492)
Q Consensus 479 p~n~K---A~~r~ 488 (492)
|++.. |+|++
T Consensus 72 P~~~~~~~a~~~~ 84 (225)
T 2yhc_A 72 PTHPNIDYVMYMR 84 (225)
T ss_dssp TTCTTHHHHHHHH
T ss_pred cCCCcHHHHHHHH
Confidence 99987 66644
No 134
>1elw_A TPR1-domain of HOP; HOP, TPR-domain, peptide-complex, helical repeat, HSP70, protein binding, chaperone; 1.60A {Homo sapiens} SCOP: a.118.8.1
Probab=97.90 E-value=1.3e-05 Score=64.05 Aligned_cols=74 Identities=14% Similarity=-0.014 Sum_probs=63.4
Q ss_pred HHHHHhhhHHHHcccHHHHHHHHHHHHHHhcccCCCChHHHHHHHHHHHHhHhHHHHHHHHhcCHHHHHHHHHHHHhcCC
Q 011164 400 GKKKEQGNTLFKAGKYARASKRYEKAVKYIEYDTSFGDEEKKQAKALKVACNLNNAACKLKLKDYKQAEKLCTKVQQQKK 479 (492)
Q Consensus 400 ~~~K~~Gn~~fk~~~~~~A~~~Y~~al~~l~~~~~~~~~~~~~~~~~~~~l~~N~a~~~lk~~~~~~ai~~~~~al~~dp 479 (492)
..+...|..+++.++|.+|+..|+++++... ....++.|+|.|+.++++|++|+..+.++++++|
T Consensus 39 ~~~~~~a~~~~~~~~~~~A~~~~~~~~~~~~---------------~~~~~~~~~a~~~~~~~~~~~A~~~~~~~~~~~~ 103 (118)
T 1elw_A 39 VLYSNRSAAYAKKGDYQKAYEDGCKTVDLKP---------------DWGKGYSRKAAALEFLNRFEEAKRTYEEGLKHEA 103 (118)
T ss_dssp HHHHHHHHHHHHHTCHHHHHHHHHHHHHHCT---------------TCHHHHHHHHHHHHHTTCHHHHHHHHHHHHTTCT
T ss_pred HHHHHHHHHHHhhccHHHHHHHHHHHHHhCc---------------ccHHHHHHHHHHHHHHhhHHHHHHHHHHHHHcCC
Confidence 3456778889999999999999999998732 1256889999999999999999999999999999
Q ss_pred CCccceeee
Q 011164 480 FLLLPIFNI 488 (492)
Q Consensus 480 ~n~KA~~r~ 488 (492)
++..+++++
T Consensus 104 ~~~~~~~~l 112 (118)
T 1elw_A 104 NNPQLKEGL 112 (118)
T ss_dssp TCHHHHHHH
T ss_pred CCHHHHHHH
Confidence 998776653
No 135
>2h6f_A Protein farnesyltransferase/geranylgeranyltransferase type I alpha subunit; ftase, farnesyltransferase, farnesyl transferase, prenyltransferase, CAAX, RAS, lipid modification, prenylation; HET: SUC FAR; 1.50A {Homo sapiens} SCOP: a.118.6.1 PDB: 1jcq_A* 1ld7_A* 1mzc_A* 1s63_A* 1sa4_A* 1tn6_A* 1ld8_A* 2h6g_A* 2h6h_A* 2h6i_A* 2iej_A* 3e37_A* 2f0y_A* 3ksl_A* 2zir_A* 2zis_A* 1o5m_A* 3ksq_A* 1o1t_A* 1o1s_A* ...
Probab=97.89 E-value=4.7e-06 Score=83.54 Aligned_cols=89 Identities=6% Similarity=-0.134 Sum_probs=43.5
Q ss_pred HHHHHhhhHHHHccc-HHHHHHHHHHHHHHhccc--------------CCCChH-----HHHHHHHHHHHhHhHHHHHHH
Q 011164 400 GKKKEQGNTLFKAGK-YARASKRYEKAVKYIEYD--------------TSFGDE-----EKKQAKALKVACNLNNAACKL 459 (492)
Q Consensus 400 ~~~K~~Gn~~fk~~~-~~~A~~~Y~~al~~l~~~--------------~~~~~~-----~~~~~~~~~~~l~~N~a~~~l 459 (492)
..+..+|+.+++.|+ |.+|+..|+++++.-... ....+. ..-.+++-...+|+|++.|+.
T Consensus 132 ~a~~~~g~~l~~~g~d~~eAl~~~~~al~l~P~~~~a~~~~g~~~~~~g~~~eAl~~~~kal~ldP~~~~a~~~lg~~~~ 211 (382)
T 2h6f_A 132 TVWHFRRVLLKSLQKDLHEEMNYITAIIEEQPKNYQVWHHRRVLVEWLRDPSQELEFIADILNQDAKNYHAWQHRQWVIQ 211 (382)
T ss_dssp HHHHHHHHHHHHTTCCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHTCCTTHHHHHHHHHHHCTTCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHcccCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHccCHHHHHHHHHHHHHhCccCHHHHHHHHHHHH
Confidence 344566666666675 777777777777642110 000000 001112222344555555555
Q ss_pred HhcCHHHHHHHHHHHHhcCCCCccceeee
Q 011164 460 KLKDYKQAEKLCTKVQQQKKFLLLPIFNI 488 (492)
Q Consensus 460 k~~~~~~ai~~~~~al~~dp~n~KA~~r~ 488 (492)
++++|++|+.+++++|+++|+|..||+++
T Consensus 212 ~~g~~~eAl~~~~~al~l~P~~~~a~~~l 240 (382)
T 2h6f_A 212 EFKLWDNELQYVDQLLKEDVRNNSVWNQR 240 (382)
T ss_dssp HHTCCTTHHHHHHHHHHHCTTCHHHHHHH
T ss_pred HcCChHHHHHHHHHHHHhCCCCHHHHHHH
Confidence 55555555555555555555555555443
No 136
>2lni_A Stress-induced-phosphoprotein 1; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative, chaperone; NMR {Homo sapiens}
Probab=97.88 E-value=9.4e-06 Score=66.72 Aligned_cols=27 Identities=15% Similarity=0.150 Sum_probs=14.8
Q ss_pred HHHhhhHHHHcccHHHHHHHHHHHHHH
Q 011164 402 KKEQGNTLFKAGKYARASKRYEKAVKY 428 (492)
Q Consensus 402 ~K~~Gn~~fk~~~~~~A~~~Y~~al~~ 428 (492)
+...|..+++.++|.+|+..|+++++.
T Consensus 53 ~~~la~~~~~~~~~~~A~~~~~~a~~~ 79 (133)
T 2lni_A 53 YSNRAACYTKLLEFQLALKDCEECIQL 79 (133)
T ss_dssp HHHHHHHHTTTTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHhccHHHHHHHHHHHHHh
Confidence 344455555555566666555555554
No 137
>3gty_X Trigger factor, TF; chaperone-client complex, cell cycle, cell division, chapero isomerase, rotamase, ribonucleoprotein, binding; 3.40A {Thermotoga maritima} PDB: 3gu0_A
Probab=97.87 E-value=2.1e-05 Score=79.69 Aligned_cols=88 Identities=14% Similarity=0.093 Sum_probs=74.3
Q ss_pred CCCCCCEEEEEEEEEecCCCEEeecCCCCCcEEEEcCCCcccHhHHHHhccCcCccEEEEEecCCcccCCCCCCCCCCCC
Q 011164 52 TPENGDEVEVHYTGTLLDGTQFDSSRDRSTPFKFTLGQGNVIKGWDIGIKTMKKGENAVFTIPPELAYGESGSPPTIPPN 131 (492)
Q Consensus 52 ~~~~gd~V~v~Y~~~~~dg~~~~ss~~~~~p~~f~lg~~~~~~gle~~l~~m~~Ge~~~~~i~~~~ayg~~~~~~~i~~~ 131 (492)
.++.||.|.|+|+++ .||..|+++.. .++.+.+|.+. + |+.+|.||++|+++.|.+.. +|
T Consensus 154 ~a~~gD~V~id~~~~-~dG~~~~~~~~--~~~~l~~g~~~--~-fe~~liG~k~Ge~~~~~vtF--------------aG 213 (433)
T 3gty_X 154 PAEAGDLVRVNMEVY-NEEGKKLTSRE--YEYVISEDEDR--P-FVKDLVGKKKGDVVEIEREY--------------EG 213 (433)
T ss_dssp CCCTTSEEEEEEEEE-CTTSCEEEEEE--EEEECCSSCCC--T-THHHHTTCCTTCEEEEEEEE--------------TT
T ss_pred ccCCCCEEEEEEEEE-ECCEECcCCCC--CCeEEEecCCc--h-HHHHhCCCCCCceEEEEEee--------------CC
Confidence 467999999999988 59999998754 68888899887 3 99999999999999999843 35
Q ss_pred CceEEEEEEEEEeecccccccccceeee
Q 011164 132 ATLQFDVELLSWTSVKDICKDGGIIKKI 159 (492)
Q Consensus 132 ~~l~~~vel~~~~~~~~~~~d~~~~k~i 159 (492)
.+..|.|.+..+.....+..|..+++.+
T Consensus 214 k~a~F~VtV~~Ik~~~lPEldDEfak~~ 241 (433)
T 3gty_X 214 KKYTYKLEVEEVYKRTLPEIGDELAKSV 241 (433)
T ss_dssp EEEEEEEEEEEEEEECCCCSSHHHHHTT
T ss_pred CeEEEEEEEEEEEEecCCcccHHHHHHh
Confidence 7899999999999877777777777754
No 138
>2fbn_A 70 kDa peptidylprolyl isomerase, putative; sulfur SAD, PFL2275C, TPR-containing domain, structural genomics; 1.63A {Plasmodium falciparum} SCOP: a.118.8.1
Probab=97.86 E-value=1.6e-05 Score=71.31 Aligned_cols=74 Identities=12% Similarity=-0.020 Sum_probs=64.5
Q ss_pred HHHHHHhhhHHHHcccHHHHHHHHHHHHHHhcccCCCChHHHHHHHHHHHHhHhHHHHHHHHhcCHHHHHHHHHHHHhcC
Q 011164 399 AGKKKEQGNTLFKAGKYARASKRYEKAVKYIEYDTSFGDEEKKQAKALKVACNLNNAACKLKLKDYKQAEKLCTKVQQQK 478 (492)
Q Consensus 399 a~~~K~~Gn~~fk~~~~~~A~~~Y~~al~~l~~~~~~~~~~~~~~~~~~~~l~~N~a~~~lk~~~~~~ai~~~~~al~~d 478 (492)
+..+...|..+++.++|.+|+..|+++++.-. ....++.|+|.|++++++|++|+..+.++++++
T Consensus 88 ~~~~~~la~~~~~~~~~~~A~~~~~~al~~~p---------------~~~~~~~~lg~~~~~~~~~~~A~~~~~~al~~~ 152 (198)
T 2fbn_A 88 ISCNLNLATCYNKNKDYPKAIDHASKVLKIDK---------------NNVKALYKLGVANMYFGFLEEAKENLYKAASLN 152 (198)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHST---------------TCHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHS
T ss_pred HHHHHHHHHHHHHhcCHHHHHHHHHHHHHhCc---------------ccHHHHHHHHHHHHHcccHHHHHHHHHHHHHHC
Confidence 45677889999999999999999999998722 236789999999999999999999999999999
Q ss_pred CCCccceee
Q 011164 479 KFLLLPIFN 487 (492)
Q Consensus 479 p~n~KA~~r 487 (492)
|++..++..
T Consensus 153 p~~~~~~~~ 161 (198)
T 2fbn_A 153 PNNLDIRNS 161 (198)
T ss_dssp TTCHHHHHH
T ss_pred CCcHHHHHH
Confidence 998766544
No 139
>2h6f_A Protein farnesyltransferase/geranylgeranyltransferase type I alpha subunit; ftase, farnesyltransferase, farnesyl transferase, prenyltransferase, CAAX, RAS, lipid modification, prenylation; HET: SUC FAR; 1.50A {Homo sapiens} SCOP: a.118.6.1 PDB: 1jcq_A* 1ld7_A* 1mzc_A* 1s63_A* 1sa4_A* 1tn6_A* 1ld8_A* 2h6g_A* 2h6h_A* 2h6i_A* 2iej_A* 3e37_A* 2f0y_A* 3ksl_A* 2zir_A* 2zis_A* 1o5m_A* 3ksq_A* 1o1t_A* 1o1s_A* ...
Probab=97.84 E-value=7.9e-06 Score=81.89 Aligned_cols=92 Identities=12% Similarity=-0.049 Sum_probs=58.2
Q ss_pred HHHHHHHhhhHHHHcccHHHHHHHHHHHHHHhccc-------------CCC-ChHHHH------HHHHHHHHhHhHHHHH
Q 011164 398 AAGKKKEQGNTLFKAGKYARASKRYEKAVKYIEYD-------------TSF-GDEEKK------QAKALKVACNLNNAAC 457 (492)
Q Consensus 398 ~a~~~K~~Gn~~fk~~~~~~A~~~Y~~al~~l~~~-------------~~~-~~~~~~------~~~~~~~~l~~N~a~~ 457 (492)
.+..+...|..+++.|+|.+|+..|+++|+.-... ... .++... .+.+-...+|+|++.|
T Consensus 96 ~~~a~~~lg~~~~~~g~~~~Al~~~~~al~l~P~~~~a~~~~g~~l~~~g~d~~eAl~~~~~al~l~P~~~~a~~~~g~~ 175 (382)
T 2h6f_A 96 FRDVYDYFRAVLQRDERSERAFKLTRDAIELNAANYTVWHFRRVLLKSLQKDLHEEMNYITAIIEEQPKNYQVWHHRRVL 175 (382)
T ss_dssp HHHHHHHHHHHHHHTCCCHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHCTTCHHHHHHHHHH
T ss_pred hHHHHHHHHHHHHHCCChHHHHHHHHHHHHhCccCHHHHHHHHHHHHHcccCHHHHHHHHHHHHHHCCCCHHHHHHHHHH
Confidence 35567778899999999999999999999863221 000 111111 1122234466667777
Q ss_pred HHHhcCHHHHHHHHHHHHhcCCCCccceeeee
Q 011164 458 KLKLKDYKQAEKLCTKVQQQKKFLLLPIFNIY 489 (492)
Q Consensus 458 ~lk~~~~~~ai~~~~~al~~dp~n~KA~~r~~ 489 (492)
+.++++|++|+.+++++|+++|+|..||+++.
T Consensus 176 ~~~~g~~~eAl~~~~kal~ldP~~~~a~~~lg 207 (382)
T 2h6f_A 176 VEWLRDPSQELEFIADILNQDAKNYHAWQHRQ 207 (382)
T ss_dssp HHHHTCCTTHHHHHHHHHHHCTTCHHHHHHHH
T ss_pred HHHccCHHHHHHHHHHHHHhCccCHHHHHHHH
Confidence 77777777777777777777776666666543
No 140
>1zu2_A Mitochondrial import receptor subunit TOM20-3; TPR, tetratricopeptide repeat like, TPR-like, transport protein; NMR {Arabidopsis thaliana} SCOP: a.118.8.1
Probab=97.82 E-value=3.4e-06 Score=72.82 Aligned_cols=65 Identities=11% Similarity=0.019 Sum_probs=56.7
Q ss_pred HcccHHHHHHHHHHHHHHhcccCCCChHHHHHHHHHHHHhHhHHHHHHHHhcCHH----------HHHHHHHHHHhcCCC
Q 011164 411 KAGKYARASKRYEKAVKYIEYDTSFGDEEKKQAKALKVACNLNNAACKLKLKDYK----------QAEKLCTKVQQQKKF 480 (492)
Q Consensus 411 k~~~~~~A~~~Y~~al~~l~~~~~~~~~~~~~~~~~~~~l~~N~a~~~lk~~~~~----------~ai~~~~~al~~dp~ 480 (492)
+.+.|++|+..|++++.. .+.....|.|++.|++++++++ +||..+++||+++|+
T Consensus 14 r~~~feeA~~~~~~Ai~l---------------~P~~aea~~n~G~~l~~l~~~~~g~~al~~~~eAi~~le~AL~ldP~ 78 (158)
T 1zu2_A 14 RILLFEQIRQDAENTYKS---------------NPLDADNLTRWGGVLLELSQFHSISDAKQMIQEAITKFEEALLIDPK 78 (158)
T ss_dssp HHHHHHHHHHHHHHHHHH---------------CTTCHHHHHHHHHHHHHHHHHSCHHHHHHHHHHHHHHHHHHHHHCTT
T ss_pred HHhHHHHHHHHHHHHHHH---------------CCCCHHHHHHHHHHHHHhcccchhhhhHhHHHHHHHHHHHHHHhCcC
Confidence 557899999999999987 3345889999999999998764 999999999999999
Q ss_pred Cccceeeeec
Q 011164 481 LLLPIFNIYA 490 (492)
Q Consensus 481 n~KA~~r~~~ 490 (492)
+..|||+.-.
T Consensus 79 ~~~A~~~LG~ 88 (158)
T 1zu2_A 79 KDEAVWCIGN 88 (158)
T ss_dssp CHHHHHHHHH
T ss_pred cHHHHHHHHH
Confidence 9999987643
No 141
>1hh8_A P67PHOX, NCF-2, neutrophil cytosol factor 2; cell cycle, phagocyte oxidase factor, SH3 domain, repeat, TPR repeat cell cycle; HET: FLC; 1.8A {Homo sapiens} SCOP: a.118.8.1 PDB: 1wm5_A 1e96_B*
Probab=97.80 E-value=1.3e-05 Score=72.28 Aligned_cols=34 Identities=12% Similarity=-0.039 Sum_probs=17.6
Q ss_pred HhHhHHHHHHHHhcCHHHHHHHHHHHHhcCCCCc
Q 011164 449 ACNLNNAACKLKLKDYKQAEKLCTKVQQQKKFLL 482 (492)
Q Consensus 449 ~l~~N~a~~~lk~~~~~~ai~~~~~al~~dp~n~ 482 (492)
.+++|+|.|++++++|++|+..+++++++.|++.
T Consensus 72 ~~~~~lg~~~~~~~~~~~A~~~~~~al~~~~~~~ 105 (213)
T 1hh8_A 72 VAYFQRGMLYYQTEKYDLAIKDLKEALIQLRGNQ 105 (213)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHHTTTTCS
T ss_pred HHHHHHHHHHHHcccHHHHHHHHHHHHHhCCCcc
Confidence 3445555555555555555555555555555443
No 142
>2dba_A Smooth muscle cell associated protein-1, isoform 2; tetratricopeptide repeat, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=97.80 E-value=2.2e-05 Score=65.92 Aligned_cols=73 Identities=15% Similarity=-0.002 Sum_probs=63.1
Q ss_pred HHHHHHhhhHHHHcccHHHHHHHHHHHHHHhcccCCCChHHHHHHHHHHHHhHhHHHHHHHHhcCHHHHHHHHHHHHhcC
Q 011164 399 AGKKKEQGNTLFKAGKYARASKRYEKAVKYIEYDTSFGDEEKKQAKALKVACNLNNAACKLKLKDYKQAEKLCTKVQQQK 478 (492)
Q Consensus 399 a~~~K~~Gn~~fk~~~~~~A~~~Y~~al~~l~~~~~~~~~~~~~~~~~~~~l~~N~a~~~lk~~~~~~ai~~~~~al~~d 478 (492)
...+...|..+++.++|.+|+..|+++++.... ...++.|+|.|+.++++|++|+..+.++++++
T Consensus 65 ~~~~~~~a~~~~~~~~~~~A~~~~~~~~~~~~~---------------~~~~~~~~a~~~~~~~~~~~A~~~~~~al~~~ 129 (148)
T 2dba_A 65 AVLHRNRAACHLKLEDYDKAETEASKAIEKDGG---------------DVKALYRRSQALEKLGRLDQAVLDLQRCVSLE 129 (148)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHTSC---------------CHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHC
T ss_pred HHHHHHHHHHHHHHccHHHHHHHHHHHHhhCcc---------------CHHHHHHHHHHHHHcCCHHHHHHHHHHHHHcC
Confidence 456677888999999999999999999987321 26778999999999999999999999999999
Q ss_pred CCCcccee
Q 011164 479 KFLLLPIF 486 (492)
Q Consensus 479 p~n~KA~~ 486 (492)
|++..++.
T Consensus 130 p~~~~~~~ 137 (148)
T 2dba_A 130 PKNKVFQE 137 (148)
T ss_dssp SSCHHHHH
T ss_pred CCcHHHHH
Confidence 99876554
No 143
>1hh8_A P67PHOX, NCF-2, neutrophil cytosol factor 2; cell cycle, phagocyte oxidase factor, SH3 domain, repeat, TPR repeat cell cycle; HET: FLC; 1.8A {Homo sapiens} SCOP: a.118.8.1 PDB: 1wm5_A 1e96_B*
Probab=97.79 E-value=1.6e-05 Score=71.63 Aligned_cols=74 Identities=18% Similarity=0.108 Sum_probs=64.7
Q ss_pred HHHHHHHhhhHHHHcccHHHHHHHHHHHHHHhcccCCCChHHHHHHHHHHHHhHhHHHHHHHHhcCHHHHHHHHHHHHhc
Q 011164 398 AAGKKKEQGNTLFKAGKYARASKRYEKAVKYIEYDTSFGDEEKKQAKALKVACNLNNAACKLKLKDYKQAEKLCTKVQQQ 477 (492)
Q Consensus 398 ~a~~~K~~Gn~~fk~~~~~~A~~~Y~~al~~l~~~~~~~~~~~~~~~~~~~~l~~N~a~~~lk~~~~~~ai~~~~~al~~ 477 (492)
.+..+...|+.+++.|+|.+|+..|++++.. ...++.|+|.|++++++|++|+..+++++++
T Consensus 5 ~~~~~~~~g~~~~~~~~~~~A~~~~~~a~~~------------------~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~ 66 (213)
T 1hh8_A 5 EAISLWNEGVLAADKKDWKGALDAFSAVQDP------------------HSRICFNIGCMYTILKNMTEAEKAFTRSINR 66 (213)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHHHHHTSSSC------------------CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHhCCHHHHHHHHHHHcCC------------------ChHHHHHHHHHHHHcCCHHHHHHHHHHHHHh
Confidence 4556778999999999999999999998521 1468999999999999999999999999999
Q ss_pred CCCCccceeeee
Q 011164 478 KKFLLLPIFNIY 489 (492)
Q Consensus 478 dp~n~KA~~r~~ 489 (492)
+|++..+++++.
T Consensus 67 ~~~~~~~~~~lg 78 (213)
T 1hh8_A 67 DKHLAVAYFQRG 78 (213)
T ss_dssp CTTCHHHHHHHH
T ss_pred CccchHHHHHHH
Confidence 999998887654
No 144
>2xev_A YBGF; tetratricopeptide, alpha-helical, metal binding; 1.57A {Xanthomonas campestris}
Probab=97.79 E-value=4.2e-05 Score=62.77 Aligned_cols=73 Identities=10% Similarity=0.007 Sum_probs=61.2
Q ss_pred HHHHHhhhHHHHcccHHHHHHHHHHHHHHhcccCCCChHHHHHHHHHHHHhHhHHHHHHHHhcCHHHHHHHHHHHHhcCC
Q 011164 400 GKKKEQGNTLFKAGKYARASKRYEKAVKYIEYDTSFGDEEKKQAKALKVACNLNNAACKLKLKDYKQAEKLCTKVQQQKK 479 (492)
Q Consensus 400 ~~~K~~Gn~~fk~~~~~~A~~~Y~~al~~l~~~~~~~~~~~~~~~~~~~~l~~N~a~~~lk~~~~~~ai~~~~~al~~dp 479 (492)
..+...|..+++.|+|.+|+..|+++++..... .....++.++|.|+.+++++++|+..++++++.+|
T Consensus 40 ~~~~~lg~~~~~~~~~~~A~~~~~~~~~~~p~~------------~~~~~~~~~la~~~~~~g~~~~A~~~~~~~~~~~p 107 (129)
T 2xev_A 40 NALYWLGESYYATRNFQLAEAQFRDLVSRYPTH------------DKAAGGLLKLGLSQYGEGKNTEAQQTLQQVATQYP 107 (129)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTS------------TTHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHST
T ss_pred HHHHHHHHHHHHhccHHHHHHHHHHHHHHCCCC------------cccHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHCC
Confidence 355678899999999999999999999863321 12356789999999999999999999999999999
Q ss_pred CCccc
Q 011164 480 FLLLP 484 (492)
Q Consensus 480 ~n~KA 484 (492)
++..+
T Consensus 108 ~~~~~ 112 (129)
T 2xev_A 108 GSDAA 112 (129)
T ss_dssp TSHHH
T ss_pred CChHH
Confidence 87643
No 145
>2vyi_A SGTA protein; chaperone, TPR repeat, phosphoprotein, tetratricopeptide repeat protein, HOST-virus interaction; 2.4A {Homo sapiens} SCOP: k.38.1.1
Probab=97.78 E-value=2.4e-05 Score=63.70 Aligned_cols=27 Identities=26% Similarity=0.289 Sum_probs=15.9
Q ss_pred HHHhhhHHHHcccHHHHHHHHHHHHHH
Q 011164 402 KKEQGNTLFKAGKYARASKRYEKAVKY 428 (492)
Q Consensus 402 ~K~~Gn~~fk~~~~~~A~~~Y~~al~~ 428 (492)
+...|..++..++|.+|+..|.++++.
T Consensus 49 ~~~~a~~~~~~~~~~~A~~~~~~~~~~ 75 (131)
T 2vyi_A 49 FCNRAAAYSKLGNYAGAVQDCERAICI 75 (131)
T ss_dssp HHHHHHHHHHTTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHhhchHHHHHHHHHHHhc
Confidence 344555556666666666666666654
No 146
>1pc2_A Mitochondria fission protein; unknown function; NMR {Homo sapiens} SCOP: a.118.8.1
Probab=97.77 E-value=6.5e-05 Score=64.12 Aligned_cols=69 Identities=16% Similarity=0.062 Sum_probs=51.9
Q ss_pred HhhhHHHHcc---cHHHHHHHHHHHHHHhcccCCCChHHHHHHHHHHHHhHhHHHHHHHHhcCHHHHHHHHHHHHhcCCC
Q 011164 404 EQGNTLFKAG---KYARASKRYEKAVKYIEYDTSFGDEEKKQAKALKVACNLNNAACKLKLKDYKQAEKLCTKVQQQKKF 480 (492)
Q Consensus 404 ~~Gn~~fk~~---~~~~A~~~Y~~al~~l~~~~~~~~~~~~~~~~~~~~l~~N~a~~~lk~~~~~~ai~~~~~al~~dp~ 480 (492)
..|..+.+.+ ++++|+..++..++.- . ...+..+++|+|..++|+++|.+|+++|+++|+++|+
T Consensus 37 ~ya~~Lv~S~~~~~~~~gI~lLe~ll~~~------~-------p~~~rd~lY~LAv~~~kl~~Y~~A~~y~~~lL~ieP~ 103 (152)
T 1pc2_A 37 EYAWCLVRSKYNDDIRKGIVLLEELLPKG------S-------KEEQRDYVFYLAVGNYRLKEYEKALKYVRGLLQTEPQ 103 (152)
T ss_dssp HHHHHHHTCSSHHHHHHHHHHHHHHHHHS------C-------HHHHHHHHHHHHHHHHHTSCHHHHHHHHHHHHHHCTT
T ss_pred HHHHHHHcCCCHHHHHHHHHHHHHHHhcC------C-------ccchHHHHHHHHHHHHHccCHHHHHHHHHHHHhcCCC
Confidence 3444455544 5667777777766530 0 1145778999999999999999999999999999999
Q ss_pred Cccce
Q 011164 481 LLLPI 485 (492)
Q Consensus 481 n~KA~ 485 (492)
|..|.
T Consensus 104 n~QA~ 108 (152)
T 1pc2_A 104 NNQAK 108 (152)
T ss_dssp CHHHH
T ss_pred CHHHH
Confidence 98764
No 147
>4i17_A Hypothetical protein; TPR repeats protein, structural genomics, joint center for S genomics, JCSG, protein structure initiative; HET: MSE; 1.83A {Bacteroides fragilis}
Probab=97.75 E-value=4.7e-05 Score=69.50 Aligned_cols=83 Identities=7% Similarity=-0.003 Sum_probs=65.6
Q ss_pred HHHHHHhhhHHHHcccHHHHHHHHHHHHHHhcccCCCChHHHHHHHHHHHHhHhHHHHHHHHhcCHHHHHHHHHHHHhcC
Q 011164 399 AGKKKEQGNTLFKAGKYARASKRYEKAVKYIEYDTSFGDEEKKQAKALKVACNLNNAACKLKLKDYKQAEKLCTKVQQQK 478 (492)
Q Consensus 399 a~~~K~~Gn~~fk~~~~~~A~~~Y~~al~~l~~~~~~~~~~~~~~~~~~~~l~~N~a~~~lk~~~~~~ai~~~~~al~~d 478 (492)
...+...|..+++.|+|.+|+..|+++++..... .........+|.|++.++.++++|++|+..++++++++
T Consensus 76 ~~~~~~l~~~~~~~~~~~~A~~~~~~al~~~p~~--------~~~~~~~~~~~~~~g~~~~~~~~~~~A~~~~~~al~~~ 147 (228)
T 4i17_A 76 ANAYIGKSAAYRDMKNNQEYIATLTEGIKAVPGN--------ATIEKLYAIYYLKEGQKFQQAGNIEKAEENYKHATDVT 147 (228)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHSTTC--------HHHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHTTSS
T ss_pred HHHHHHHHHHHHHcccHHHHHHHHHHHHHHCCCc--------HHHHHHHHHHHHHHhHHHHHhccHHHHHHHHHHHHhcC
Confidence 3456677888888888888888888888763221 22344556789999999999999999999999999999
Q ss_pred CC--Cccceeeee
Q 011164 479 KF--LLLPIFNIY 489 (492)
Q Consensus 479 p~--n~KA~~r~~ 489 (492)
|+ +..+++++.
T Consensus 148 p~~~~~~~~~~l~ 160 (228)
T 4i17_A 148 SKKWKTDALYSLG 160 (228)
T ss_dssp CHHHHHHHHHHHH
T ss_pred CCcccHHHHHHHH
Confidence 99 888877653
No 148
>1na0_A Designed protein CTPR3; de novo protein; HET: IPT; 1.60A {Unidentified} SCOP: k.38.1.1 PDB: 2wqh_A 3kd7_A
Probab=97.73 E-value=3.5e-05 Score=62.10 Aligned_cols=89 Identities=20% Similarity=0.158 Sum_probs=52.3
Q ss_pred HHHHHhhhHHHHcccHHHHHHHHHHHHHHhcccC-------------CCChHHHHHH------HHHHHHhHhHHHHHHHH
Q 011164 400 GKKKEQGNTLFKAGKYARASKRYEKAVKYIEYDT-------------SFGDEEKKQA------KALKVACNLNNAACKLK 460 (492)
Q Consensus 400 ~~~K~~Gn~~fk~~~~~~A~~~Y~~al~~l~~~~-------------~~~~~~~~~~------~~~~~~l~~N~a~~~lk 460 (492)
..+...|..+++.++|.+|+..|+++++...... ...++....+ .+....++.++|.++.+
T Consensus 10 ~~~~~~~~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~la~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~la~~~~~ 89 (125)
T 1na0_A 10 EAWYNLGNAYYKQGDYDEAIEYYQKALELDPNNAEAWYNLGNAYYKQGDYDEAIEYYQKALELDPNNAEAWYNLGNAYYK 89 (125)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHcCCHHHHHHHHHHHHHHCcCcHHHHHHHHHHHHHhCCHHHHHHHHHHHHHhCCccHHHHHHHHHHHHH
Confidence 3445566666777777777777777765421100 0000000000 11124567788888888
Q ss_pred hcCHHHHHHHHHHHHhcCCCCccceeee
Q 011164 461 LKDYKQAEKLCTKVQQQKKFLLLPIFNI 488 (492)
Q Consensus 461 ~~~~~~ai~~~~~al~~dp~n~KA~~r~ 488 (492)
+++|++|+..+.++++++|++..+++++
T Consensus 90 ~~~~~~A~~~~~~~~~~~~~~~~~~~~l 117 (125)
T 1na0_A 90 QGDYDEAIEYYQKALELDPNNAEAKQNL 117 (125)
T ss_dssp TTCHHHHHHHHHHHHHHCTTCHHHHHHH
T ss_pred hcCHHHHHHHHHHHHHhCCCcHHHHHHH
Confidence 8888888888888888888777665543
No 149
>1ihg_A Cyclophilin 40; ppiase immunophilin tetratricopeptide, isomerase; 1.80A {Bos taurus} SCOP: a.118.8.1 b.62.1.1 PDB: 1iip_A
Probab=97.73 E-value=2.5e-05 Score=77.90 Aligned_cols=74 Identities=16% Similarity=-0.010 Sum_probs=63.2
Q ss_pred HHHHHHhhhHHHHcccHHHHHHHHHHHHHHhcccCCCChHHHHHHHHHHHHhHhHHHHHHHHhcCHHHHHHHHHHHHhcC
Q 011164 399 AGKKKEQGNTLFKAGKYARASKRYEKAVKYIEYDTSFGDEEKKQAKALKVACNLNNAACKLKLKDYKQAEKLCTKVQQQK 478 (492)
Q Consensus 399 a~~~K~~Gn~~fk~~~~~~A~~~Y~~al~~l~~~~~~~~~~~~~~~~~~~~l~~N~a~~~lk~~~~~~ai~~~~~al~~d 478 (492)
+..+...|..+++.++|.+|+..|++|++.- +....++.|+|.||+++++|++|+.++++|++++
T Consensus 273 ~~~~~nla~~~~~~g~~~~A~~~~~~al~~~---------------p~~~~a~~~lg~~~~~~g~~~eA~~~l~~Al~l~ 337 (370)
T 1ihg_A 273 LSCVLNIGACKLKMSDWQGAVDSCLEALEID---------------PSNTKALYRRAQGWQGLKEYDQALADLKKAQEIA 337 (370)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHTTC---------------TTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHC
T ss_pred HHHHHHHHHHHHhccCHHHHHHHHHHHHHhC---------------chhHHHHHHHHHHHHHccCHHHHHHHHHHHHHhC
Confidence 3445678888999999999999999999862 2236789999999999999999999999999999
Q ss_pred CCCccceee
Q 011164 479 KFLLLPIFN 487 (492)
Q Consensus 479 p~n~KA~~r 487 (492)
|++..++..
T Consensus 338 P~~~~~~~~ 346 (370)
T 1ihg_A 338 PEDKAIQAE 346 (370)
T ss_dssp TTCHHHHHH
T ss_pred CCCHHHHHH
Confidence 998766543
No 150
>2kat_A Uncharacterized protein; NESG, structure, structural genomics, PSI-2, protein structure initiative; NMR {Bordetella parapertussis}
Probab=97.72 E-value=4.1e-05 Score=61.85 Aligned_cols=67 Identities=9% Similarity=-0.095 Sum_probs=58.1
Q ss_pred HHHHHhhhHHHHcccHHHHHHHHHHHHHHhcccCCCChHHHHHHHHHHHHhHhHHHHHHHHhcCHHHHHHHHHHHHhcCC
Q 011164 400 GKKKEQGNTLFKAGKYARASKRYEKAVKYIEYDTSFGDEEKKQAKALKVACNLNNAACKLKLKDYKQAEKLCTKVQQQKK 479 (492)
Q Consensus 400 ~~~K~~Gn~~fk~~~~~~A~~~Y~~al~~l~~~~~~~~~~~~~~~~~~~~l~~N~a~~~lk~~~~~~ai~~~~~al~~dp 479 (492)
..+...|..+++.|+|.+|+..|+++++.-. ....++.|+|.|+.+++++++|+..+.++++++|
T Consensus 20 ~~~~~lg~~~~~~g~~~~A~~~~~~al~~~p---------------~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~~ 84 (115)
T 2kat_A 20 LLRFTLGKTYAEHEQFDAALPHLRAALDFDP---------------TYSVAWKWLGKTLQGQGDRAGARQAWESGLAAAQ 84 (115)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHHHCT---------------TCHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHccCHHHHHHHHHHHHHHCC---------------CcHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhcc
Confidence 3566789999999999999999999998722 2356789999999999999999999999999988
Q ss_pred CC
Q 011164 480 FL 481 (492)
Q Consensus 480 ~n 481 (492)
.+
T Consensus 85 ~~ 86 (115)
T 2kat_A 85 SR 86 (115)
T ss_dssp HH
T ss_pred cc
Confidence 54
No 151
>2kck_A TPR repeat; tetratricopeptide repeat, structural genomics, unknown function, PSI-2, protein structure initiative; NMR {Methanococcus maripaludis}
Probab=97.71 E-value=4.7e-05 Score=60.19 Aligned_cols=69 Identities=14% Similarity=0.122 Sum_probs=58.8
Q ss_pred HHHHhhhHHHHcccHHHHHHHHHHHHHHhcccCCCChHHHHHHHHHHHHhHhHHHHHHHHh-cCHHHHHHHHHHHHhcCC
Q 011164 401 KKKEQGNTLFKAGKYARASKRYEKAVKYIEYDTSFGDEEKKQAKALKVACNLNNAACKLKL-KDYKQAEKLCTKVQQQKK 479 (492)
Q Consensus 401 ~~K~~Gn~~fk~~~~~~A~~~Y~~al~~l~~~~~~~~~~~~~~~~~~~~l~~N~a~~~lk~-~~~~~ai~~~~~al~~dp 479 (492)
.+...|..+++.++|.+|+..|+++++.... .....++.|+|.|+.++ +++++|+..+.+++..+|
T Consensus 42 ~~~~~a~~~~~~~~~~~A~~~~~~a~~~~~~-------------~~~~~~~~~l~~~~~~~~~~~~~A~~~~~~~~~~~p 108 (112)
T 2kck_A 42 YWLMKGKALYNLERYEEAVDCYNYVINVIED-------------EYNKDVWAAKADALRYIEGKEVEAEIAEARAKLEHH 108 (112)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHHHHHHTSCC-------------TTCHHHHHHHHHHHTTCSSCSHHHHHHHHHHGGGCC
T ss_pred HHHHHHHHHHHccCHHHHHHHHHHHHHhCcc-------------cchHHHHHHHHHHHHHHhCCHHHHHHHHHHHhhccc
Confidence 4567888999999999999999999986322 01256889999999999 999999999999999999
Q ss_pred CCc
Q 011164 480 FLL 482 (492)
Q Consensus 480 ~n~ 482 (492)
++.
T Consensus 109 ~~~ 111 (112)
T 2kck_A 109 HHH 111 (112)
T ss_dssp CCC
T ss_pred CCC
Confidence 764
No 152
>3gty_X Trigger factor, TF; chaperone-client complex, cell cycle, cell division, chapero isomerase, rotamase, ribonucleoprotein, binding; 3.40A {Thermotoga maritima} PDB: 3gu0_A
Probab=97.69 E-value=0.00015 Score=73.51 Aligned_cols=76 Identities=16% Similarity=0.234 Sum_probs=63.5
Q ss_pred CCCCCCEEEEEEEEEEcCCcEEEEcCCCCCcccEEEEcCCcccchhHHHHHhccCcCcEEEEEECCCCccCCCccccccc
Q 011164 285 RPNEGAVVKVKLIGKLQDGTVFVKKGHSEEEQLFEFKTDEEQVIDGLDRAVITMKKNEVALLTIAPEYAFGSAESQQELA 364 (492)
Q Consensus 285 ~p~~g~~V~v~y~~~~~~g~~~d~~~~~~~~~~~~~~lg~~~~~~gle~~l~~m~~Ge~~~i~ip~~~~yg~~~~~~~~~ 364 (492)
....||.|+++|++. .||..|+++ ...++.+.+|.+. + |+.+|.||++||...|.+..
T Consensus 154 ~a~~gD~V~id~~~~-~dG~~~~~~----~~~~~~l~~g~~~--~-fe~~liG~k~Ge~~~~~vtF-------------- 211 (433)
T 3gty_X 154 PAEAGDLVRVNMEVY-NEEGKKLTS----REYEYVISEDEDR--P-FVKDLVGKKKGDVVEIEREY-------------- 211 (433)
T ss_dssp CCCTTSEEEEEEEEE-CTTSCEEEE----EEEEEECCSSCCC--T-THHHHTTCCTTCEEEEEEEE--------------
T ss_pred ccCCCCEEEEEEEEE-ECCEECcCC----CCCCeEEEecCCc--h-HHHHhCCCCCCceEEEEEee--------------
Confidence 467899999999998 489999865 3467888899887 3 99999999999999999832
Q ss_pred cCCCCccEEEEEEEeeeeecc
Q 011164 365 VVPPNSTVHYEVELVSFEKEK 385 (492)
Q Consensus 365 ~ip~~~~l~~~v~l~~~~~~~ 385 (492)
+|.+..|.|+|.+|....
T Consensus 212 ---aGk~a~F~VtV~~Ik~~~ 229 (433)
T 3gty_X 212 ---EGKKYTYKLEVEEVYKRT 229 (433)
T ss_dssp ---TTEEEEEEEEEEEEEEEC
T ss_pred ---CCCeEEEEEEEEEEEEec
Confidence 366799999999998643
No 153
>3uq3_A Heat shock protein STI1; HSP90, peptide binding, chaperone; 2.60A {Saccharomyces cerevisiae}
Probab=97.67 E-value=4.2e-05 Score=70.49 Aligned_cols=75 Identities=20% Similarity=0.262 Sum_probs=60.1
Q ss_pred HHHHHHhhhHHHHcccHHHHHHHHHHHHHHhcccCCCChHHHHHHHHHHHHhHhHHHHHHHHhcCHHHHHHHHHHHHhcC
Q 011164 399 AGKKKEQGNTLFKAGKYARASKRYEKAVKYIEYDTSFGDEEKKQAKALKVACNLNNAACKLKLKDYKQAEKLCTKVQQQK 478 (492)
Q Consensus 399 a~~~K~~Gn~~fk~~~~~~A~~~Y~~al~~l~~~~~~~~~~~~~~~~~~~~l~~N~a~~~lk~~~~~~ai~~~~~al~~d 478 (492)
+..+...|..+++.|+|.+|+..|++++..... ...++.|+|.|++++++|++|+..++++++++
T Consensus 139 ~~~~~~~~~~~~~~~~~~~A~~~~~~a~~~~~~---------------~~~~~~~l~~~~~~~~~~~~A~~~~~~al~~~ 203 (258)
T 3uq3_A 139 AEEARLEGKEYFTKSDWPNAVKAYTEMIKRAPE---------------DARGYSNRAAALAKLMSFPEAIADCNKAIEKD 203 (258)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTT---------------CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHC
T ss_pred HHHHHHHHHHHHHhcCHHHHHHHHHHHHhcCcc---------------cHHHHHHHHHHHHHhCCHHHHHHHHHHHHHhC
Confidence 445667899999999999999999999986322 24677888888888888888888888888888
Q ss_pred CCCccceeee
Q 011164 479 KFLLLPIFNI 488 (492)
Q Consensus 479 p~n~KA~~r~ 488 (492)
|++..+++++
T Consensus 204 ~~~~~~~~~l 213 (258)
T 3uq3_A 204 PNFVRAYIRK 213 (258)
T ss_dssp TTCHHHHHHH
T ss_pred HHHHHHHHHH
Confidence 8887776654
No 154
>3q49_B STIP1 homology and U box-containing protein 1; E3 ubiquitin ligase, ligase-chaperone complex; 1.54A {Mus musculus} PDB: 3q47_B 3q4a_B*
Probab=97.66 E-value=4.8e-05 Score=63.12 Aligned_cols=67 Identities=13% Similarity=0.113 Sum_probs=58.9
Q ss_pred HHHHHhhhHHHHcccHHHHHHHHHHHHHHhcccCCCChHHHHHHHHHHHHhHhHHHHHHHHhcCHHHHHHHHHHHHhcCC
Q 011164 400 GKKKEQGNTLFKAGKYARASKRYEKAVKYIEYDTSFGDEEKKQAKALKVACNLNNAACKLKLKDYKQAEKLCTKVQQQKK 479 (492)
Q Consensus 400 ~~~K~~Gn~~fk~~~~~~A~~~Y~~al~~l~~~~~~~~~~~~~~~~~~~~l~~N~a~~~lk~~~~~~ai~~~~~al~~dp 479 (492)
..+...|..+++.++|.+|+..|+++++.-. ....++.|+|.|+.++++|++|+..+.++++++|
T Consensus 44 ~~~~~l~~~~~~~~~~~~A~~~~~~al~~~p---------------~~~~~~~~l~~~~~~~~~~~~A~~~~~~a~~~~p 108 (137)
T 3q49_B 44 VYYTNRALCYLKMQQPEQALADCRRALELDG---------------QSVKAHFFLGQCQLEMESYDEAIANLQRAYSLAK 108 (137)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHHHCT---------------TCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhcCHHHHHHHHHHHHHhCc---------------hhHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHCh
Confidence 4567789999999999999999999998732 2366899999999999999999999999999998
Q ss_pred CC
Q 011164 480 FL 481 (492)
Q Consensus 480 ~n 481 (492)
++
T Consensus 109 ~~ 110 (137)
T 3q49_B 109 EQ 110 (137)
T ss_dssp HT
T ss_pred hH
Confidence 73
No 155
>1na0_A Designed protein CTPR3; de novo protein; HET: IPT; 1.60A {Unidentified} SCOP: k.38.1.1 PDB: 2wqh_A 3kd7_A
Probab=97.65 E-value=5.6e-05 Score=60.87 Aligned_cols=27 Identities=33% Similarity=0.567 Sum_probs=17.1
Q ss_pred HHHhhhHHHHcccHHHHHHHHHHHHHH
Q 011164 402 KKEQGNTLFKAGKYARASKRYEKAVKY 428 (492)
Q Consensus 402 ~K~~Gn~~fk~~~~~~A~~~Y~~al~~ 428 (492)
+...|..+++.++|.+|+..|+++++.
T Consensus 46 ~~~la~~~~~~~~~~~A~~~~~~~~~~ 72 (125)
T 1na0_A 46 WYNLGNAYYKQGDYDEAIEYYQKALEL 72 (125)
T ss_dssp HHHHHHHHHHTTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHhCCHHHHHHHHHHHHHh
Confidence 344556666666777777777666654
No 156
>1a17_A Serine/threonine protein phosphatase 5; hydrolase, protein-protein interactions, TPR, S helix; 2.45A {Homo sapiens} SCOP: a.118.8.1 PDB: 2bug_A
Probab=97.65 E-value=6.8e-05 Score=64.13 Aligned_cols=71 Identities=13% Similarity=0.037 Sum_probs=61.7
Q ss_pred HHHHHhhhHHHHcccHHHHHHHHHHHHHHhcccCCCChHHHHHHHHHHHHhHhHHHHHHHHhcCHHHHHHHHHHHHhcCC
Q 011164 400 GKKKEQGNTLFKAGKYARASKRYEKAVKYIEYDTSFGDEEKKQAKALKVACNLNNAACKLKLKDYKQAEKLCTKVQQQKK 479 (492)
Q Consensus 400 ~~~K~~Gn~~fk~~~~~~A~~~Y~~al~~l~~~~~~~~~~~~~~~~~~~~l~~N~a~~~lk~~~~~~ai~~~~~al~~dp 479 (492)
..+...|..+++.|+|.+|+..|+++++... ....++.|+|.|+.++++|++|+..+.++++++|
T Consensus 48 ~~~~~~a~~~~~~~~~~~A~~~~~~a~~~~~---------------~~~~~~~~~a~~~~~~~~~~~A~~~~~~a~~~~p 112 (166)
T 1a17_A 48 IYYGNRSLAYLRTECYGYALGDATRAIELDK---------------KYIKGYYRRAASNMALGKFRAALRDYETVVKVKP 112 (166)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHHHCT---------------TCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHST
T ss_pred HHHHHHHHHHHHcCCHHHHHHHHHHHHHhCc---------------ccHHHHHHHHHHHHHhccHHHHHHHHHHHHHhCC
Confidence 3456778889999999999999999998732 1256889999999999999999999999999999
Q ss_pred CCccce
Q 011164 480 FLLLPI 485 (492)
Q Consensus 480 ~n~KA~ 485 (492)
++..++
T Consensus 113 ~~~~~~ 118 (166)
T 1a17_A 113 HDKDAK 118 (166)
T ss_dssp TCHHHH
T ss_pred CCHHHH
Confidence 988765
No 157
>3qky_A Outer membrane assembly lipoprotein YFIO; membrane protein; 2.15A {Rhodothermus marinus}
Probab=97.64 E-value=8.6e-05 Score=69.44 Aligned_cols=78 Identities=15% Similarity=0.169 Sum_probs=64.9
Q ss_pred HHHHHHhhhHHHHcccHHHHHHHHHHHHHHhcccCCCChHHHHHHHHHHHHhHhHHHHHHHHhcCHHHHHHHHHHHHhcC
Q 011164 399 AGKKKEQGNTLFKAGKYARASKRYEKAVKYIEYDTSFGDEEKKQAKALKVACNLNNAACKLKLKDYKQAEKLCTKVQQQK 478 (492)
Q Consensus 399 a~~~K~~Gn~~fk~~~~~~A~~~Y~~al~~l~~~~~~~~~~~~~~~~~~~~l~~N~a~~~lk~~~~~~ai~~~~~al~~d 478 (492)
+..+...|..++++|+|.+|+..|+++++.... .+....++.++|.|++++++|++|+..++++++++
T Consensus 15 ~~~~~~~a~~~~~~g~~~~A~~~~~~~l~~~p~------------~~~~~~a~~~lg~~~~~~~~~~~A~~~~~~~l~~~ 82 (261)
T 3qky_A 15 PQEAFERAMEFYNQGKYDRAIEYFKAVFTYGRT------------HEWAADAQFYLARAYYQNKEYLLAASEYERFIQIY 82 (261)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHGGGCSC------------STTHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHC
T ss_pred HHHHHHHHHHHHHhCCHHHHHHHHHHHHHhCCC------------CcchHHHHHHHHHHHHHhCcHHHHHHHHHHHHHHC
Confidence 456788999999999999999999999986432 12346789999999999999999999999999999
Q ss_pred CCCc---cceeee
Q 011164 479 KFLL---LPIFNI 488 (492)
Q Consensus 479 p~n~---KA~~r~ 488 (492)
|++. .|+|++
T Consensus 83 p~~~~~~~a~~~l 95 (261)
T 3qky_A 83 QIDPRVPQAEYER 95 (261)
T ss_dssp TTCTTHHHHHHHH
T ss_pred CCCchhHHHHHHH
Confidence 8764 355543
No 158
>1elr_A TPR2A-domain of HOP; HOP, TPR-domain, peptide-complex, helical repeat, protein binding, chaperone; 1.90A {Homo sapiens} SCOP: a.118.8.1 PDB: 3esk_A 3fwv_A
Probab=97.63 E-value=0.00011 Score=59.66 Aligned_cols=77 Identities=16% Similarity=0.131 Sum_probs=61.6
Q ss_pred HHHHHhhhHHHHcccHHHHHHHHHHHHHHhcccCCCChHHHHHHHHHHHHhHhHHHHHHHHhcCHHHHHHHHHHHHhcCC
Q 011164 400 GKKKEQGNTLFKAGKYARASKRYEKAVKYIEYDTSFGDEEKKQAKALKVACNLNNAACKLKLKDYKQAEKLCTKVQQQKK 479 (492)
Q Consensus 400 ~~~K~~Gn~~fk~~~~~~A~~~Y~~al~~l~~~~~~~~~~~~~~~~~~~~l~~N~a~~~lk~~~~~~ai~~~~~al~~dp 479 (492)
..+...|..+++.|+|.+|+..|++++......... ......++.|+|.++.++++|++|+..+.++++++|
T Consensus 39 ~~~~~la~~~~~~~~~~~A~~~~~~~~~~~~~~~~~--------~~~~~~~~~~la~~~~~~~~~~~A~~~~~~~~~~~~ 110 (131)
T 1elr_A 39 TYITNQAAVYFEKGDYNKCRELCEKAIEVGRENRED--------YRQIAKAYARIGNSYFKEEKYKDAIHFYNKSLAEHR 110 (131)
T ss_dssp HHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHSTTC--------HHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCC
T ss_pred HHHHHHHHHHHHhccHHHHHHHHHHHHhhccccchh--------HHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHhCC
Confidence 345677888999999999999999999874432111 223477899999999999999999999999999988
Q ss_pred CCccce
Q 011164 480 FLLLPI 485 (492)
Q Consensus 480 ~n~KA~ 485 (492)
+..++
T Consensus 111 -~~~~~ 115 (131)
T 1elr_A 111 -TPDVL 115 (131)
T ss_dssp -CHHHH
T ss_pred -CHHHH
Confidence 45443
No 159
>2e2e_A Formate-dependent nitrite reductase complex NRFG; TPR, cytochrome C biogenesis, O157:H7 EDL933, formate- nitrite reductase complex, lyase; 2.05A {Escherichia coli}
Probab=97.62 E-value=5e-05 Score=66.38 Aligned_cols=84 Identities=14% Similarity=0.126 Sum_probs=53.0
Q ss_pred HHHHHHhhhHHHHcccHHHHHHHHHHHHHHhccc--------------CCCC--hHHHHHH------HHHHHHhHhHHHH
Q 011164 399 AGKKKEQGNTLFKAGKYARASKRYEKAVKYIEYD--------------TSFG--DEEKKQA------KALKVACNLNNAA 456 (492)
Q Consensus 399 a~~~K~~Gn~~fk~~~~~~A~~~Y~~al~~l~~~--------------~~~~--~~~~~~~------~~~~~~l~~N~a~ 456 (492)
+..+...|..++..|+|.+|+..|+++++..... .... ++....+ .+....++.|+|.
T Consensus 44 ~~~~~~lg~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~la~~l~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~la~ 123 (177)
T 2e2e_A 44 SEQWALLGEYYLWQNDYSNSLLAYRQALQLRGENAELYAALATVLYYQASQHMTAQTRAMIDKALALDSNEITALMLLAS 123 (177)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHCSCHHHHHHHHHHHHHHTTTCCCHHHHHHHHHHHHHCTTCHHHHHHHHH
T ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHhcCCcchHHHHHHHHHHHHhCCCcHHHHHHHHH
Confidence 3456788899999999999999999999764321 0000 1111111 1122445666777
Q ss_pred HHHHhcCHHHHHHHHHHHHhcCCCCc
Q 011164 457 CKLKLKDYKQAEKLCTKVQQQKKFLL 482 (492)
Q Consensus 457 ~~lk~~~~~~ai~~~~~al~~dp~n~ 482 (492)
+++++++|++|+..+.++++++|++.
T Consensus 124 ~~~~~g~~~~A~~~~~~al~~~p~~~ 149 (177)
T 2e2e_A 124 DAFMQANYAQAIELWQKVMDLNSPRI 149 (177)
T ss_dssp HHHHTTCHHHHHHHHHHHHHTCCTTS
T ss_pred HHHHcccHHHHHHHHHHHHhhCCCCc
Confidence 77777777777777777777776654
No 160
>3ieg_A DNAJ homolog subfamily C member 3; TPR motif, chaperone, endoplasmic reticulum, TPR repeat, UNF protein response; 2.51A {Mus musculus}
Probab=97.61 E-value=4.6e-05 Score=73.85 Aligned_cols=75 Identities=24% Similarity=0.135 Sum_probs=60.6
Q ss_pred HHHHHHhhhHHHHcccHHHHHHHHHHHHHHhcccCCCChHHHHHHHHHHHHhHhHHHHHHHHhcCHHHHHHHHHHHHhcC
Q 011164 399 AGKKKEQGNTLFKAGKYARASKRYEKAVKYIEYDTSFGDEEKKQAKALKVACNLNNAACKLKLKDYKQAEKLCTKVQQQK 478 (492)
Q Consensus 399 a~~~K~~Gn~~fk~~~~~~A~~~Y~~al~~l~~~~~~~~~~~~~~~~~~~~l~~N~a~~~lk~~~~~~ai~~~~~al~~d 478 (492)
+..+...|+.+++.|+|.+|+..|+++++.... ...++.++|.|++++++|++|+..+.++++++
T Consensus 3 ~~~~~~~~~~~~~~g~~~~A~~~~~~~l~~~p~---------------~~~~~~~~a~~~~~~~~~~~A~~~~~~~~~~~ 67 (359)
T 3ieg_A 3 VEKHLELGKKLLAAGQLADALSQFHAAVDGDPD---------------NYIAYYRRATVFLAMGKSKAALPDLTKVIALK 67 (359)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTT---------------CHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHC
T ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCcc---------------cHHHHHHHHHHHHHccCHHHHHHHHHHHHHhC
Confidence 456788999999999999999999999986321 24677888888888888888888888888888
Q ss_pred CCCccceeee
Q 011164 479 KFLLLPIFNI 488 (492)
Q Consensus 479 p~n~KA~~r~ 488 (492)
|++..++++.
T Consensus 68 ~~~~~~~~~l 77 (359)
T 3ieg_A 68 MDFTAARLQR 77 (359)
T ss_dssp TTCHHHHHHH
T ss_pred CCcchHHHHH
Confidence 8877766554
No 161
>1xnf_A Lipoprotein NLPI; TPR, tetratricopeptide, structural genomi unknown function; 1.98A {Escherichia coli} SCOP: a.118.8.1
Probab=97.58 E-value=6.1e-05 Score=70.31 Aligned_cols=76 Identities=13% Similarity=-0.029 Sum_probs=54.1
Q ss_pred HHHHHHHhhhHHHHcccHHHHHHHHHHHHHHhcccCCCChHHHHHHHHHHHHhHhHHHHHHHHhcCHHHHHHHHHHHHhc
Q 011164 398 AAGKKKEQGNTLFKAGKYARASKRYEKAVKYIEYDTSFGDEEKKQAKALKVACNLNNAACKLKLKDYKQAEKLCTKVQQQ 477 (492)
Q Consensus 398 ~a~~~K~~Gn~~fk~~~~~~A~~~Y~~al~~l~~~~~~~~~~~~~~~~~~~~l~~N~a~~~lk~~~~~~ai~~~~~al~~ 477 (492)
.+..+...|..++..|+|.+|+..|+++++.-.. ...++.++|.++.++++|++|+..+.+++++
T Consensus 42 ~~~~~~~l~~~~~~~~~~~~A~~~~~~al~~~~~---------------~~~~~~~la~~~~~~~~~~~A~~~~~~al~~ 106 (275)
T 1xnf_A 42 RAQLLYERGVLYDSLGLRALARNDFSQALAIRPD---------------MPEVFNYLGIYLTQAGNFDAAYEAFDSVLEL 106 (275)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCCC---------------CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH
T ss_pred hHHHHHHHHHHHHHcccHHHHHHHHHHHHHcCCC---------------cHHHHHHHHHHHHHccCHHHHHHHHHHHHhc
Confidence 4556677888999999999999999999986321 2445666677777777777777777777777
Q ss_pred CCCCccceeee
Q 011164 478 KKFLLLPIFNI 488 (492)
Q Consensus 478 dp~n~KA~~r~ 488 (492)
+|++..+++++
T Consensus 107 ~~~~~~~~~~l 117 (275)
T 1xnf_A 107 DPTYNYAHLNR 117 (275)
T ss_dssp CTTCTHHHHHH
T ss_pred CccccHHHHHH
Confidence 66666555443
No 162
>3uq3_A Heat shock protein STI1; HSP90, peptide binding, chaperone; 2.60A {Saccharomyces cerevisiae}
Probab=97.58 E-value=3.2e-05 Score=71.32 Aligned_cols=69 Identities=25% Similarity=0.343 Sum_probs=62.3
Q ss_pred HHHHHHHHhhhHHHHcccHHHHHHHHHHHHHHhcccCCCChHHHHHHHHHHHHhHhHHHHHHHHhcCHHHHHHHHHHHHh
Q 011164 397 EAAGKKKEQGNTLFKAGKYARASKRYEKAVKYIEYDTSFGDEEKKQAKALKVACNLNNAACKLKLKDYKQAEKLCTKVQQ 476 (492)
Q Consensus 397 ~~a~~~K~~Gn~~fk~~~~~~A~~~Y~~al~~l~~~~~~~~~~~~~~~~~~~~l~~N~a~~~lk~~~~~~ai~~~~~al~ 476 (492)
..+..+...|+.+++.|+|.+|+..|+++++.. . ...++.++|.|+.++++|++|+..+.++++
T Consensus 3 ~~a~~~~~~g~~~~~~~~~~~A~~~~~~a~~~~-~---------------~~~~~~~~~~~~~~~~~~~~A~~~~~~a~~ 66 (258)
T 3uq3_A 3 SMADKEKAEGNKFYKARQFDEAIEHYNKAWELH-K---------------DITYLNNRAAAEYEKGEYETAISTLNDAVE 66 (258)
T ss_dssp HHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHS-C---------------CTHHHHHHHHHHHHTTCHHHHHHHHHHHHH
T ss_pred hHHHHHHHHHHHHHHhccHHHHHHHHHHHHHhh-c---------------cHHHHHHHHHHHHHcccHHHHHHHHHHHHH
Confidence 457889999999999999999999999999873 1 256899999999999999999999999999
Q ss_pred cCCCC
Q 011164 477 QKKFL 481 (492)
Q Consensus 477 ~dp~n 481 (492)
++|++
T Consensus 67 ~~~~~ 71 (258)
T 3uq3_A 67 QGREM 71 (258)
T ss_dssp HHHHT
T ss_pred hCccc
Confidence 99876
No 163
>3u3w_A Transcriptional activator PLCR protein; ternary complex, PLCR-PAPR7-DNA, HTH DNA-binding domain, QUO sensing; 2.40A {Bacillus thuringiensis} PDB: 2qfc_A
Probab=97.57 E-value=0.00016 Score=69.02 Aligned_cols=76 Identities=13% Similarity=0.096 Sum_probs=63.6
Q ss_pred HHHHHHHhhhHHHHcccHHHHHHHHHHHHHHhcccCCCChHHHHHHHHHHHHhHhHHHHHHHHhcCHHHHHHHHHHHHhc
Q 011164 398 AAGKKKEQGNTLFKAGKYARASKRYEKAVKYIEYDTSFGDEEKKQAKALKVACNLNNAACKLKLKDYKQAEKLCTKVQQQ 477 (492)
Q Consensus 398 ~a~~~K~~Gn~~fk~~~~~~A~~~Y~~al~~l~~~~~~~~~~~~~~~~~~~~l~~N~a~~~lk~~~~~~ai~~~~~al~~ 477 (492)
.+..+...|+.++..|+|.+|+..|++|++.+..... .......+++|+|.+|.++++|++|+..++++|++
T Consensus 154 ~~~~~~~lg~~y~~~g~~~~A~~~~~~al~~~~~~~~--------~~~~~~~~~~nlg~~y~~~~~y~~A~~~~~~al~~ 225 (293)
T 3u3w_A 154 NLYIENAIANIYAENGYLKKGIDLFEQILKQLEALHD--------NEEFDVKVRYNHAKALYLDSRYEESLYQVNKAIEI 225 (293)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHSSC--------CHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHhccc--------chhHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHH
Confidence 3456788899999999999999999999987654322 14567889999999999999999999999999998
Q ss_pred CCCC
Q 011164 478 KKFL 481 (492)
Q Consensus 478 dp~n 481 (492)
.+.+
T Consensus 226 ~~~~ 229 (293)
T 3u3w_A 226 SCRI 229 (293)
T ss_dssp HHHT
T ss_pred HHHc
Confidence 6543
No 164
>2pzi_A Probable serine/threonine-protein kinase PKNG; ATP-recognition, kinase-INH complex, rubredoxin fold, TPR domain, transferase; HET: AXX; 2.40A {Mycobacterium tuberculosis}
Probab=97.55 E-value=3.9e-05 Score=82.91 Aligned_cols=74 Identities=19% Similarity=0.188 Sum_probs=60.3
Q ss_pred HHHHhhhHHHHcccHHHHHHHHHHHHHHhcccCCCChHHHHHHHHHHHHhHhHHHHHHHHhcCHHHHHHHHHHHHhcCCC
Q 011164 401 KKKEQGNTLFKAGKYARASKRYEKAVKYIEYDTSFGDEEKKQAKALKVACNLNNAACKLKLKDYKQAEKLCTKVQQQKKF 480 (492)
Q Consensus 401 ~~K~~Gn~~fk~~~~~~A~~~Y~~al~~l~~~~~~~~~~~~~~~~~~~~l~~N~a~~~lk~~~~~~ai~~~~~al~~dp~ 480 (492)
.+...|..+++.|+|.+|+..|+++++.- +....+++|+|.+++++++|++|+.++++||+++|+
T Consensus 435 ~~~~~a~~~~~~g~~~~A~~~~~~al~~~---------------p~~~~a~~~lg~~~~~~g~~~~A~~~~~~al~l~P~ 499 (681)
T 2pzi_A 435 LPLMEVRALLDLGDVAKATRKLDDLAERV---------------GWRWRLVWYRAVAELLTGDYDSATKHFTEVLDTFPG 499 (681)
T ss_dssp HHHHHHHHHHHHTCHHHHHHHHHHHHHHH---------------CCCHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHSTT
T ss_pred HHHHHHHHHHhcCCHHHHHHHHHHHhccC---------------cchHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCC
Confidence 45677888999999999999999999863 223667888888888888888888888888888888
Q ss_pred Cccceeeee
Q 011164 481 LLLPIFNIY 489 (492)
Q Consensus 481 n~KA~~r~~ 489 (492)
+..+++++.
T Consensus 500 ~~~~~~~lg 508 (681)
T 2pzi_A 500 ELAPKLALA 508 (681)
T ss_dssp CSHHHHHHH
T ss_pred ChHHHHHHH
Confidence 887776543
No 165
>1wao_1 Serine/threonine protein phosphatase 5; hydrolase, protein-protein interactions, TPR, super-helix,; 2.9A {Homo sapiens} SCOP: a.118.8.1 d.159.1.3
Probab=97.54 E-value=7.1e-05 Score=77.24 Aligned_cols=75 Identities=13% Similarity=0.046 Sum_probs=65.0
Q ss_pred HHHHHHhhhHHHHcccHHHHHHHHHHHHHHhcccCCCChHHHHHHHHHHHHhHhHHHHHHHHhcCHHHHHHHHHHHHhcC
Q 011164 399 AGKKKEQGNTLFKAGKYARASKRYEKAVKYIEYDTSFGDEEKKQAKALKVACNLNNAACKLKLKDYKQAEKLCTKVQQQK 478 (492)
Q Consensus 399 a~~~K~~Gn~~fk~~~~~~A~~~Y~~al~~l~~~~~~~~~~~~~~~~~~~~l~~N~a~~~lk~~~~~~ai~~~~~al~~d 478 (492)
+..+...|..+++.|+|++|+..|++|++.- +....+++|+|.+|.++++|++|+..++++++++
T Consensus 40 ~~~~~~lg~~~~~~g~~~~A~~~~~~al~l~---------------p~~~~~~~~lg~~~~~~g~~~eA~~~~~~al~~~ 104 (477)
T 1wao_1 40 AIYYGNRSLAYLRTECYGYALGDATRAIELD---------------KKYIKGYYRRAASNMALGKFRAALRDYETVVKVK 104 (477)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHSC---------------TTCHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHS
T ss_pred HHHHHHHHHHHHHhcCHHHHHHHHHHHHHhC---------------CCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhC
Confidence 4456788999999999999999999999862 2236789999999999999999999999999999
Q ss_pred CCCccceeee
Q 011164 479 KFLLLPIFNI 488 (492)
Q Consensus 479 p~n~KA~~r~ 488 (492)
|++..+++.+
T Consensus 105 p~~~~~~~~l 114 (477)
T 1wao_1 105 PHDKDAKMKY 114 (477)
T ss_dssp TTCTTHHHHH
T ss_pred CCCHHHHHHH
Confidence 9998876554
No 166
>1qqe_A Vesicular transport protein SEC17; helix-turn-helix TPR-like repeat, protein transport; 2.90A {Saccharomyces cerevisiae} SCOP: a.118.8.1
Probab=97.48 E-value=0.00049 Score=65.72 Aligned_cols=76 Identities=29% Similarity=0.256 Sum_probs=62.4
Q ss_pred HHHHHHhhhHHHHc-ccHHHHHHHHHHHHHHhcccCCCChHHHHHHHHHHHHhHhHHHHHHHHhcCHHHHHHHHHHHHhc
Q 011164 399 AGKKKEQGNTLFKA-GKYARASKRYEKAVKYIEYDTSFGDEEKKQAKALKVACNLNNAACKLKLKDYKQAEKLCTKVQQQ 477 (492)
Q Consensus 399 a~~~K~~Gn~~fk~-~~~~~A~~~Y~~al~~l~~~~~~~~~~~~~~~~~~~~l~~N~a~~~lk~~~~~~ai~~~~~al~~ 477 (492)
+..+...|..+.+. |+|.+|+..|++|+++...... ......+++|++.+++++++|++|+..+++++++
T Consensus 117 a~~~~~lg~~~~~~lg~~~~A~~~~~~Al~~~~~~~~---------~~~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~ 187 (292)
T 1qqe_A 117 ANFKFELGEILENDLHDYAKAIDCYELAGEWYAQDQS---------VALSNKCFIKCADLKALDGQYIEASDIYSKLIKS 187 (292)
T ss_dssp HHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHHTTC---------HHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHhhcCHHHHHHHHHHHHHHHHhCCC---------hHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHH
Confidence 45667788888886 9999999999999998543211 2234678999999999999999999999999999
Q ss_pred CCCCcc
Q 011164 478 KKFLLL 483 (492)
Q Consensus 478 dp~n~K 483 (492)
+|++..
T Consensus 188 ~~~~~~ 193 (292)
T 1qqe_A 188 SMGNRL 193 (292)
T ss_dssp TSSCTT
T ss_pred HhcCCc
Confidence 987754
No 167
>3ieg_A DNAJ homolog subfamily C member 3; TPR motif, chaperone, endoplasmic reticulum, TPR repeat, UNF protein response; 2.51A {Mus musculus}
Probab=97.45 E-value=0.00032 Score=67.79 Aligned_cols=76 Identities=21% Similarity=0.259 Sum_probs=44.5
Q ss_pred HHHHHhhhHHHHcccHHHHHHHHHHHHHHhcccCCCChHHHHHHHHHHHHhHhHHHHHHHHhcCHHHHHHHHHHHHhcCC
Q 011164 400 GKKKEQGNTLFKAGKYARASKRYEKAVKYIEYDTSFGDEEKKQAKALKVACNLNNAACKLKLKDYKQAEKLCTKVQQQKK 479 (492)
Q Consensus 400 ~~~K~~Gn~~fk~~~~~~A~~~Y~~al~~l~~~~~~~~~~~~~~~~~~~~l~~N~a~~~lk~~~~~~ai~~~~~al~~dp 479 (492)
......|+.+++.|+|.+|+..|++++...... ......++.++|.|+.++++|++|+..++++++++|
T Consensus 235 ~~~~~~a~~~~~~~~~~~A~~~~~~~~~~~~~~-----------~~~~~~~~~~la~~~~~~~~~~~A~~~~~~~~~~~~ 303 (359)
T 3ieg_A 235 NKLIESAEELIRDGRYTDATSKYESVMKTEPSV-----------AEYTVRSKERICHCFSKDEKPVEAIRICSEVLQMEP 303 (359)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHHHCCSS-----------HHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCT
T ss_pred HHHHHHHHHHHHcCCHHHHHHHHHHHHhcCCCc-----------hHHHHHHHHHHHHHHHHccCHHHHHHHHHHHHHhCc
Confidence 344566888888999999999999888764321 112233444455555555555555555555555555
Q ss_pred CCcccee
Q 011164 480 FLLLPIF 486 (492)
Q Consensus 480 ~n~KA~~ 486 (492)
++..+++
T Consensus 304 ~~~~~~~ 310 (359)
T 3ieg_A 304 DNVNALK 310 (359)
T ss_dssp TCHHHHH
T ss_pred ccHHHHH
Confidence 4444443
No 168
>4eqf_A PEX5-related protein; accessory protein, tetratricopeptide repeat, TPR; 3.00A {Mus musculus}
Probab=97.45 E-value=6.6e-05 Score=73.70 Aligned_cols=72 Identities=11% Similarity=-0.045 Sum_probs=48.6
Q ss_pred HHHHhhhHHHHcccHHHHHHHHHHHHHHhcccCCCChHHHHHHHHHHHHhHhHHHHHHHHhcCHHHHHHHHHHHHhcCCC
Q 011164 401 KKKEQGNTLFKAGKYARASKRYEKAVKYIEYDTSFGDEEKKQAKALKVACNLNNAACKLKLKDYKQAEKLCTKVQQQKKF 480 (492)
Q Consensus 401 ~~K~~Gn~~fk~~~~~~A~~~Y~~al~~l~~~~~~~~~~~~~~~~~~~~l~~N~a~~~lk~~~~~~ai~~~~~al~~dp~ 480 (492)
.+...|..+++.|+|.+|+..|+++++.-.. ...++.+++.++.++++|++|+..+.++++++|+
T Consensus 67 ~~~~~~~~~~~~g~~~~A~~~~~~al~~~p~---------------~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~p~ 131 (365)
T 4eqf_A 67 GAFEEGLKRLKEGDLPVTILFMEAAILQDPG---------------DAEAWQFLGITQAENENEQAAIVALQRCLELQPN 131 (365)
T ss_dssp THHHHHHHHHHHTCHHHHHHHHHHHHHHCTT---------------CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTT
T ss_pred HHHHHHHHHHHCCCHHHHHHHHHHHHHhCcC---------------CHHHHHHHHHHHHHCCCHHHHHHHHHHHHhcCCC
Confidence 3556788888888888888888888876321 1445666666666666666666666666666666
Q ss_pred Cccceee
Q 011164 481 LLLPIFN 487 (492)
Q Consensus 481 n~KA~~r 487 (492)
+..++++
T Consensus 132 ~~~~~~~ 138 (365)
T 4eqf_A 132 NLKALMA 138 (365)
T ss_dssp CHHHHHH
T ss_pred CHHHHHH
Confidence 6555544
No 169
>3mkr_A Coatomer subunit epsilon; tetratricopeptide repeats (TPR), beta-hairpin, alpha-solenoi transport protein; 2.60A {Bos taurus}
Probab=97.44 E-value=0.00013 Score=69.92 Aligned_cols=42 Identities=14% Similarity=0.166 Sum_probs=38.8
Q ss_pred HHhHhHHHHHHHHhcCHHHHHHHHHHHHhcCCCCccceeeee
Q 011164 448 VACNLNNAACKLKLKDYKQAEKLCTKVQQQKKFLLLPIFNIY 489 (492)
Q Consensus 448 ~~l~~N~a~~~lk~~~~~~ai~~~~~al~~dp~n~KA~~r~~ 489 (492)
..+++|+|.|++++|+|++|+..+.++|+++|+|..+++++.
T Consensus 200 ~~~~~~la~~~~~~g~~~eA~~~l~~al~~~p~~~~~l~~l~ 241 (291)
T 3mkr_A 200 LLLLNGQAACHMAQGRWEAAEGVLQEALDKDSGHPETLINLV 241 (291)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHH
T ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHH
Confidence 568999999999999999999999999999999999988764
No 170
>2qfc_A PLCR protein; TPR, HTH, transcription regulation; 2.60A {Bacillus thuringiensis serovar ISRAELE35646}
Probab=97.44 E-value=0.00049 Score=65.59 Aligned_cols=74 Identities=14% Similarity=0.088 Sum_probs=61.2
Q ss_pred HHHHHHHhhhHHHHcccHHHHHHHHHHHHHHhcccCCCChHHHHHHHHHHHHhHhHHHHHHHHhcCHHHHHHHHHHHHhc
Q 011164 398 AAGKKKEQGNTLFKAGKYARASKRYEKAVKYIEYDTSFGDEEKKQAKALKVACNLNNAACKLKLKDYKQAEKLCTKVQQQ 477 (492)
Q Consensus 398 ~a~~~K~~Gn~~fk~~~~~~A~~~Y~~al~~l~~~~~~~~~~~~~~~~~~~~l~~N~a~~~lk~~~~~~ai~~~~~al~~ 477 (492)
.+..+...|+.++..|+|.+|+..|++|+......... ......+++|+|.||.++++|++|+..+++++++
T Consensus 154 ~~~~~~~lg~~y~~~~~~~~A~~~~~kal~~~~~~~~~--------~~~~~~~~~nlg~~y~~~~~y~~Al~~~~kal~~ 225 (293)
T 2qfc_A 154 NLYIENAIANIYAENGYLKKGIDLFEQILKQLEALHDN--------EEFDVKVRYNHAKALYLDSRYEESLYQVNKAIEI 225 (293)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHSCCC--------HHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHhcCcc--------ccchHHHHHhHHHHHHHHhhHHHHHHHHHHHHHH
Confidence 35677788999999999999999999999876543221 2233478999999999999999999999999988
Q ss_pred CC
Q 011164 478 KK 479 (492)
Q Consensus 478 dp 479 (492)
.+
T Consensus 226 ~~ 227 (293)
T 2qfc_A 226 SC 227 (293)
T ss_dssp HH
T ss_pred HH
Confidence 64
No 171
>3u4t_A TPR repeat-containing protein; structural genomics, PSI- protein structure initiative, northeast structural genomics consortium, NESG; 2.28A {Cytophaga hutchinsonii}
Probab=97.44 E-value=6.4e-05 Score=70.18 Aligned_cols=73 Identities=14% Similarity=0.074 Sum_probs=52.4
Q ss_pred HHHhhhHHHHcccHHHHHHHHHHHHHHhcccCCCChHHHHHHHHHHHHhHhHHHHHHHHhcCHHHHHHHHHHHHhcCCCC
Q 011164 402 KKEQGNTLFKAGKYARASKRYEKAVKYIEYDTSFGDEEKKQAKALKVACNLNNAACKLKLKDYKQAEKLCTKVQQQKKFL 481 (492)
Q Consensus 402 ~K~~Gn~~fk~~~~~~A~~~Y~~al~~l~~~~~~~~~~~~~~~~~~~~l~~N~a~~~lk~~~~~~ai~~~~~al~~dp~n 481 (492)
+...|..+++.|+|.+|+..|+++++.-. ....++.|+|.|+.++++|++|+..++++++++|.+
T Consensus 77 ~~~lg~~~~~~~~~~~A~~~~~~a~~~~~---------------~~~~~~~~l~~~~~~~~~~~~A~~~~~~al~~~~~~ 141 (272)
T 3u4t_A 77 FEYYGKILMKKGQDSLAIQQYQAAVDRDT---------------TRLDMYGQIGSYFYNKGNFPLAIQYMEKQIRPTTTD 141 (272)
T ss_dssp HHHHHHHHHHTTCHHHHHHHHHHHHHHST---------------TCTHHHHHHHHHHHHTTCHHHHHHHHGGGCCSSCCC
T ss_pred HHHHHHHHHHcccHHHHHHHHHHHHhcCc---------------ccHHHHHHHHHHHHHccCHHHHHHHHHHHhhcCCCc
Confidence 45667777777777777777777777522 124567778888888888888888888888888877
Q ss_pred ccceeeee
Q 011164 482 LLPIFNIY 489 (492)
Q Consensus 482 ~KA~~r~~ 489 (492)
..+++++.
T Consensus 142 ~~~~~~l~ 149 (272)
T 3u4t_A 142 PKVFYELG 149 (272)
T ss_dssp HHHHHHHH
T ss_pred HHHHHHHH
Confidence 77666543
No 172
>4abn_A Tetratricopeptide repeat protein 5; P53 cofactor, stress-response, DNA repair, gene regulation; 2.05A {Mus musculus}
Probab=97.42 E-value=7.4e-05 Score=76.99 Aligned_cols=77 Identities=16% Similarity=0.012 Sum_probs=64.1
Q ss_pred HHHHhhhHHHHc--------ccHHHHHHHHHHHHHHhcccCCCChHHHHHHHHHHHHhHhHHHHHHHHhcCHHHHHHHHH
Q 011164 401 KKKEQGNTLFKA--------GKYARASKRYEKAVKYIEYDTSFGDEEKKQAKALKVACNLNNAACKLKLKDYKQAEKLCT 472 (492)
Q Consensus 401 ~~K~~Gn~~fk~--------~~~~~A~~~Y~~al~~l~~~~~~~~~~~~~~~~~~~~l~~N~a~~~lk~~~~~~ai~~~~ 472 (492)
.+...|+.+++. ++|.+|+..|++|++.-.. ......+++|+|.||.++++|++|+..+.
T Consensus 215 ~~~~lg~~~~~~~~~~~~~~g~~~~A~~~~~~al~~~p~------------~~~~~~~~~~lg~~~~~~g~~~~A~~~~~ 282 (474)
T 4abn_A 215 SWYILGNAYLSLYFNTGQNPKISQQALSAYAQAEKVDRK------------ASSNPDLHLNRATLHKYEESYGEALEGFS 282 (474)
T ss_dssp HHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHHCGG------------GGGCHHHHHHHHHHHHHTTCHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHhhccccchHHHHHHHHHHHHHhCCC------------cccCHHHHHHHHHHHHHcCCHHHHHHHHH
Confidence 455678888888 9999999999999987220 00347889999999999999999999999
Q ss_pred HHHhcCCCCccceeeee
Q 011164 473 KVQQQKKFLLLPIFNIY 489 (492)
Q Consensus 473 ~al~~dp~n~KA~~r~~ 489 (492)
++++++|++..+++++.
T Consensus 283 ~al~l~p~~~~a~~~l~ 299 (474)
T 4abn_A 283 QAAALDPAWPEPQQREQ 299 (474)
T ss_dssp HHHHHCTTCHHHHHHHH
T ss_pred HHHHhCCCCHHHHHHHH
Confidence 99999999988776653
No 173
>2vsy_A XCC0866; transferase, glycosyl transferase, GT-B, OGT, protein O-GLCN; HET: NHE; 2.10A {Xanthomonas campestris PV} PDB: 2jlb_A* 2xgm_A* 2xgo_A* 2xgs_A* 2vsn_A*
Probab=97.38 E-value=5.7e-05 Score=79.56 Aligned_cols=89 Identities=8% Similarity=-0.107 Sum_probs=50.8
Q ss_pred HHHHHhhhHHHHcccHHHHHHHHHHHHHHhcccC-------------CCChHHHH------HHHHHHHHhHhHHHHHHHH
Q 011164 400 GKKKEQGNTLFKAGKYARASKRYEKAVKYIEYDT-------------SFGDEEKK------QAKALKVACNLNNAACKLK 460 (492)
Q Consensus 400 ~~~K~~Gn~~fk~~~~~~A~~~Y~~al~~l~~~~-------------~~~~~~~~------~~~~~~~~l~~N~a~~~lk 460 (492)
..+...|..+++.|+|.+|+..|+++++.-.... ...++... +..+....++.|+|.|+.+
T Consensus 24 ~~~~~lg~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~la~~~~~ 103 (568)
T 2vsy_A 24 VAWLMLADAELGMGDTTAGEMAVQRGLALHPGHPEAVARLGRVRWTQQRHAEAAVLLQQASDAAPEHPGIALWLGHALED 103 (568)
T ss_dssp HHHHHHHHHHHHHTCHHHHHHHHHHHHTTSTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHH
Confidence 4455667777777777777777777776421100 00000000 0111224566777777777
Q ss_pred hcCHHHHHHHHHHHHhcCCCCccceeee
Q 011164 461 LKDYKQAEKLCTKVQQQKKFLLLPIFNI 488 (492)
Q Consensus 461 ~~~~~~ai~~~~~al~~dp~n~KA~~r~ 488 (492)
+++|++|+..++++++++|++..+++++
T Consensus 104 ~g~~~~A~~~~~~al~~~p~~~~~~~~l 131 (568)
T 2vsy_A 104 AGQAEAAAAAYTRAHQLLPEEPYITAQL 131 (568)
T ss_dssp TTCHHHHHHHHHHHHHHCTTCHHHHHHH
T ss_pred cCCHHHHHHHHHHHHHhCCCCHHHHHHH
Confidence 7777777777777777777766665544
No 174
>2pzi_A Probable serine/threonine-protein kinase PKNG; ATP-recognition, kinase-INH complex, rubredoxin fold, TPR domain, transferase; HET: AXX; 2.40A {Mycobacterium tuberculosis}
Probab=97.37 E-value=3.4e-05 Score=83.35 Aligned_cols=92 Identities=9% Similarity=0.023 Sum_probs=69.7
Q ss_pred HHHHHhhhHHHHcccHHHHHHHHHHHHHHhccc--------------CCCC-hHHH---HHHHHHHHHhHhHHHHHHHHh
Q 011164 400 GKKKEQGNTLFKAGKYARASKRYEKAVKYIEYD--------------TSFG-DEEK---KQAKALKVACNLNNAACKLKL 461 (492)
Q Consensus 400 ~~~K~~Gn~~fk~~~~~~A~~~Y~~al~~l~~~--------------~~~~-~~~~---~~~~~~~~~l~~N~a~~~lk~ 461 (492)
..+...|..+++.|+|++|+..|++|++.-... .... .+.. -++++....+++|+|.|++++
T Consensus 468 ~a~~~lg~~~~~~g~~~~A~~~~~~al~l~P~~~~~~~~lg~~~~~~g~~~~~~~~~~al~~~P~~~~a~~~lg~~~~~~ 547 (681)
T 2pzi_A 468 RLVWYRAVAELLTGDYDSATKHFTEVLDTFPGELAPKLALAATAELAGNTDEHKFYQTVWSTNDGVISAAFGLARARSAE 547 (681)
T ss_dssp HHHHHHHHHHHHHTCHHHHHHHHHHHHHHSTTCSHHHHHHHHHHHHHTCCCTTCHHHHHHHHCTTCHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCChHHHHHHHHHHHHcCChHHHHHHHHHHHhCCchHHHHHHHHHHHHHc
Confidence 355678899999999999999999999864321 0011 1111 122344567899999999999
Q ss_pred cCHHHHHHHHHHHHhcCCCCccceeeeecc
Q 011164 462 KDYKQAEKLCTKVQQQKKFLLLPIFNIYAR 491 (492)
Q Consensus 462 ~~~~~ai~~~~~al~~dp~n~KA~~r~~~~ 491 (492)
|+|++|+.++++|++++|++..|+++...+
T Consensus 548 g~~~~A~~~~~~al~l~P~~~~a~~~~~~~ 577 (681)
T 2pzi_A 548 GDRVGAVRTLDEVPPTSRHFTTARLTSAVT 577 (681)
T ss_dssp TCHHHHHHHHHTSCTTSTTHHHHHHHHHHH
T ss_pred CCHHHHHHHHHhhcccCcccHHHHHHHHHH
Confidence 999999999999999999999998876544
No 175
>2y4t_A DNAJ homolog subfamily C member 3; chaperone, endoplasmic reticulum, protein folding, tetratricopeptiderepeat, J domain, unfolded protein respons; 3.00A {Homo sapiens} PDB: 2y4u_A
Probab=97.36 E-value=0.00026 Score=71.31 Aligned_cols=76 Identities=21% Similarity=0.251 Sum_probs=46.2
Q ss_pred HHHHHhhhHHHHcccHHHHHHHHHHHHHHhcccCCCChHHHHHHHHHHHHhHhHHHHHHHHhcCHHHHHHHHHHHHhcCC
Q 011164 400 GKKKEQGNTLFKAGKYARASKRYEKAVKYIEYDTSFGDEEKKQAKALKVACNLNNAACKLKLKDYKQAEKLCTKVQQQKK 479 (492)
Q Consensus 400 ~~~K~~Gn~~fk~~~~~~A~~~Y~~al~~l~~~~~~~~~~~~~~~~~~~~l~~N~a~~~lk~~~~~~ai~~~~~al~~dp 479 (492)
......|+.+++.|+|.+|+..|+++++..... ......++.++|.++.++++|++|+..++++++++|
T Consensus 258 ~~~~~~~~~~~~~g~~~~A~~~~~~~l~~~p~~-----------~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~a~~~~p 326 (450)
T 2y4t_A 258 NKLIESAEELIRDGRYTDATSKYESVMKTEPSI-----------AEYTVRSKERICHCFSKDEKPVEAIRVCSEVLQMEP 326 (450)
T ss_dssp HHHHHHHHHHHHHTCHHHHHHHHHHHHHHCCSS-----------HHHHHHHHHHHHHHHHTTTCHHHHHHHHHHHHHHCT
T ss_pred HHHHHHHHHHHHcCCHHHHHHHHHHHHhcCCcc-----------hHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHhCc
Confidence 344566999999999999999999999863221 112233445555555555555555555555555555
Q ss_pred CCcccee
Q 011164 480 FLLLPIF 486 (492)
Q Consensus 480 ~n~KA~~ 486 (492)
++..+++
T Consensus 327 ~~~~~~~ 333 (450)
T 2y4t_A 327 DNVNALK 333 (450)
T ss_dssp TCHHHHH
T ss_pred ccHHHHH
Confidence 5444443
No 176
>4eqf_A PEX5-related protein; accessory protein, tetratricopeptide repeat, TPR; 3.00A {Mus musculus}
Probab=97.35 E-value=0.00015 Score=71.02 Aligned_cols=74 Identities=12% Similarity=0.093 Sum_probs=58.8
Q ss_pred HHHHHhhhHHHHcccHHHHHHHHHHHHHHhcccCCCChHHHHHHHHHHHHhHhHHHHHHHHhcCHHHHHHHHHHHHhcCC
Q 011164 400 GKKKEQGNTLFKAGKYARASKRYEKAVKYIEYDTSFGDEEKKQAKALKVACNLNNAACKLKLKDYKQAEKLCTKVQQQKK 479 (492)
Q Consensus 400 ~~~K~~Gn~~fk~~~~~~A~~~Y~~al~~l~~~~~~~~~~~~~~~~~~~~l~~N~a~~~lk~~~~~~ai~~~~~al~~dp 479 (492)
..+...|..+++.|+|.+|+..|+++++.... ...+++|++.++.++++|++|+..+.++++++|
T Consensus 214 ~~~~~l~~~~~~~g~~~~A~~~~~~al~~~p~---------------~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~p 278 (365)
T 4eqf_A 214 DLQTGLGVLFHLSGEFNRAIDAFNAALTVRPE---------------DYSLWNRLGATLANGDRSEEAVEAYTRALEIQP 278 (365)
T ss_dssp HHHHHHHHHHHHHTCHHHHHHHHHHHHHHCTT---------------CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCT
T ss_pred HHHHHHHHHHHHCCCHHHHHHHHHHHHHhCCC---------------CHHHHHHHHHHHHHcCCHHHHHHHHHHHHhcCC
Confidence 34566788888999999999999999986321 255788888888888888888888888888888
Q ss_pred CCccceeee
Q 011164 480 FLLLPIFNI 488 (492)
Q Consensus 480 ~n~KA~~r~ 488 (492)
++..+++++
T Consensus 279 ~~~~~~~~l 287 (365)
T 4eqf_A 279 GFIRSRYNL 287 (365)
T ss_dssp TCHHHHHHH
T ss_pred CchHHHHHH
Confidence 887776654
No 177
>2y4t_A DNAJ homolog subfamily C member 3; chaperone, endoplasmic reticulum, protein folding, tetratricopeptiderepeat, J domain, unfolded protein respons; 3.00A {Homo sapiens} PDB: 2y4u_A
Probab=97.34 E-value=0.00017 Score=72.63 Aligned_cols=76 Identities=25% Similarity=0.155 Sum_probs=55.0
Q ss_pred HHHHHHHHhhhHHHHcccHHHHHHHHHHHHHHhcccCCCChHHHHHHHHHHHHhHhHHHHHHHHhcCHHHHHHHHHHHHh
Q 011164 397 EAAGKKKEQGNTLFKAGKYARASKRYEKAVKYIEYDTSFGDEEKKQAKALKVACNLNNAACKLKLKDYKQAEKLCTKVQQ 476 (492)
Q Consensus 397 ~~a~~~K~~Gn~~fk~~~~~~A~~~Y~~al~~l~~~~~~~~~~~~~~~~~~~~l~~N~a~~~lk~~~~~~ai~~~~~al~ 476 (492)
..+..+...|+.+++.|+|.+|+..|+++++.... ...++.++|.|++++++|++|+..+.++++
T Consensus 24 ~~~~~~~~~~~~~~~~g~~~~A~~~~~~~l~~~p~---------------~~~~~~~l~~~~~~~g~~~~A~~~~~~al~ 88 (450)
T 2y4t_A 24 ADVEKHLELGKKLLAAGQLADALSQFHAAVDGDPD---------------NYIAYYRRATVFLAMGKSKAALPDLTKVIQ 88 (450)
T ss_dssp HHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTT---------------CHHHHHHHHHHHHHTTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHhCCc---------------cHHHHHHHHHHHHHCCCHHHHHHHHHHHHh
Confidence 45677888999999999999999999999975221 255666666666666666666666666666
Q ss_pred cCCCCccceee
Q 011164 477 QKKFLLLPIFN 487 (492)
Q Consensus 477 ~dp~n~KA~~r 487 (492)
++|++..++++
T Consensus 89 ~~p~~~~~~~~ 99 (450)
T 2y4t_A 89 LKMDFTAARLQ 99 (450)
T ss_dssp HCTTCHHHHHH
T ss_pred cCCCcHHHHHH
Confidence 66666655544
No 178
>2vq2_A PILW, putative fimbrial biogenesis and twitching motility protein; secretin, TPR repeat, type IV pilus, bacterail virulence; 1.54A {Neisseria meningitidis}
Probab=97.32 E-value=0.00023 Score=63.82 Aligned_cols=72 Identities=17% Similarity=0.021 Sum_probs=45.4
Q ss_pred HHHHHHhhhHHHHcccHHHHHHHHHHHHHHhcccCCCChHHHHHHHHHHHHhHhHHHHHHHHhcCHHHHHHHHHHHHhcC
Q 011164 399 AGKKKEQGNTLFKAGKYARASKRYEKAVKYIEYDTSFGDEEKKQAKALKVACNLNNAACKLKLKDYKQAEKLCTKVQQQK 478 (492)
Q Consensus 399 a~~~K~~Gn~~fk~~~~~~A~~~Y~~al~~l~~~~~~~~~~~~~~~~~~~~l~~N~a~~~lk~~~~~~ai~~~~~al~~d 478 (492)
+..+...|..++..|++.+|+..|+++++.... ...++.+++.++.++++|++|+..+.++++++
T Consensus 8 ~~~~~~~~~~~~~~~~~~~A~~~~~~~~~~~~~---------------~~~~~~~l~~~~~~~~~~~~A~~~~~~a~~~~ 72 (225)
T 2vq2_A 8 SNIKTQLAMEYMRGQDYRQATASIEDALKSDPK---------------NELAWLVRAEIYQYLKVNDKAQESFRQALSIK 72 (225)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTT---------------CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHC
T ss_pred HHHHHHHHHHHHHHhhHHHHHHHHHHHHHhCcc---------------chHHHHHHHHHHHHcCChHHHHHHHHHHHHhC
Confidence 455667788888888888888888888875321 13345555555556666666666666665555
Q ss_pred CCCccce
Q 011164 479 KFLLLPI 485 (492)
Q Consensus 479 p~n~KA~ 485 (492)
|++..++
T Consensus 73 ~~~~~~~ 79 (225)
T 2vq2_A 73 PDSAEIN 79 (225)
T ss_dssp TTCHHHH
T ss_pred CCChHHH
Confidence 5554443
No 179
>1fch_A Peroxisomal targeting signal 1 receptor; protein-peptide complex, tetratricopeptide repeat, TPR, helical repeat, signaling protein; 2.20A {Homo sapiens} SCOP: a.118.8.1 PDB: 2j9q_A 3imz_B* 3r9a_B* 2c0m_A 2c0l_A
Probab=97.32 E-value=0.00014 Score=71.07 Aligned_cols=72 Identities=13% Similarity=0.014 Sum_probs=45.7
Q ss_pred HHHHhhhHHHHcccHHHHHHHHHHHHHHhcccCCCChHHHHHHHHHHHHhHhHHHHHHHHhcCHHHHHHHHHHHHhcCCC
Q 011164 401 KKKEQGNTLFKAGKYARASKRYEKAVKYIEYDTSFGDEEKKQAKALKVACNLNNAACKLKLKDYKQAEKLCTKVQQQKKF 480 (492)
Q Consensus 401 ~~K~~Gn~~fk~~~~~~A~~~Y~~al~~l~~~~~~~~~~~~~~~~~~~~l~~N~a~~~lk~~~~~~ai~~~~~al~~dp~ 480 (492)
.+...|..+++.|+|.+|+..|+++++.-.. ...++.++|.|+.++++|++|+..+.++++++|+
T Consensus 66 ~~~~~~~~~~~~g~~~~A~~~~~~al~~~p~---------------~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~~ 130 (368)
T 1fch_A 66 QPFEEGLRRLQEGDLPNAVLLFEAAVQQDPK---------------HMEAWQYLGTTQAENEQELLAISALRRCLELKPD 130 (368)
T ss_dssp SHHHHHHHHHHTTCHHHHHHHHHHHHHSCTT---------------CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTT
T ss_pred HHHHHHHHHHHCCCHHHHHHHHHHHHHhCCC---------------CHHHHHHHHHHHHHCcCHHHHHHHHHHHHhcCCC
Confidence 3456788888888899999998888875221 1344555555555555555555555555555555
Q ss_pred Cccceee
Q 011164 481 LLLPIFN 487 (492)
Q Consensus 481 n~KA~~r 487 (492)
+..++++
T Consensus 131 ~~~~~~~ 137 (368)
T 1fch_A 131 NQTALMA 137 (368)
T ss_dssp CHHHHHH
T ss_pred CHHHHHH
Confidence 5554443
No 180
>2fo7_A Synthetic consensus TPR protein; tetratricopeptide repeat, consensus protein, superhelix, de novo protein; 2.30A {Synthetic} SCOP: k.38.1.1 PDB: 2hyz_A
Probab=97.29 E-value=0.0002 Score=58.23 Aligned_cols=41 Identities=17% Similarity=0.121 Sum_probs=33.1
Q ss_pred HHhHhHHHHHHHHhcCHHHHHHHHHHHHhcCCCCccceeee
Q 011164 448 VACNLNNAACKLKLKDYKQAEKLCTKVQQQKKFLLLPIFNI 488 (492)
Q Consensus 448 ~~l~~N~a~~~lk~~~~~~ai~~~~~al~~dp~n~KA~~r~ 488 (492)
..++.++|.++.++++|++|+..+.++++.+|++..+++.+
T Consensus 69 ~~~~~~l~~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~l 109 (136)
T 2fo7_A 69 AEAWYNLGNAYYKQGDYDEAIEYYQKALELDPRSAEAWYNL 109 (136)
T ss_dssp HHHHHHHHHHHHTTTCHHHHHHHHHHHHHHCTTCHHHHHHH
T ss_pred hHHHHHHHHHHHHhcCHHHHHHHHHHHHHhCCCChHHHHHH
Confidence 45678888888889999999999999888888877666543
No 181
>3ro3_A PINS homolog, G-protein-signaling modulator 2; asymmetric cell division, protein binding; 1.10A {Mus musculus}
Probab=97.29 E-value=0.0012 Score=55.22 Aligned_cols=71 Identities=18% Similarity=0.175 Sum_probs=51.3
Q ss_pred HHHHHHhhhHHHHcccHHHHHHHHHHHHHHhcccCCCChHHHHHHHHHHHHhHhHHHHHHHHhcCHHHHHHHHHHHHhcC
Q 011164 399 AGKKKEQGNTLFKAGKYARASKRYEKAVKYIEYDTSFGDEEKKQAKALKVACNLNNAACKLKLKDYKQAEKLCTKVQQQK 478 (492)
Q Consensus 399 a~~~K~~Gn~~fk~~~~~~A~~~Y~~al~~l~~~~~~~~~~~~~~~~~~~~l~~N~a~~~lk~~~~~~ai~~~~~al~~d 478 (492)
+..+...|..++..|+|.+|+..|++++.+...... ......++.|+|.++..+++|++|+..+.+++++.
T Consensus 49 ~~~~~~l~~~~~~~g~~~~A~~~~~~a~~~~~~~~~---------~~~~~~~~~~l~~~~~~~~~~~~A~~~~~~a~~~~ 119 (164)
T 3ro3_A 49 RIAYSNLGNAYIFLGEFETASEYYKKTLLLARQLKD---------RAVEAQSCYSLGNTYTLLQDYEKAIDYHLKHLAIA 119 (164)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTC---------HHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHhCC---------cHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHH
Confidence 345566788888888888888888888887543211 23346677788888888888888888888887663
No 182
>3hym_B Cell division cycle protein 16 homolog; APC, anaphase promoting complex, cell cycle, mitosis, cyclosome, TPR, ubiquitin, ubiquitin ligase, twinning; 2.80A {Homo sapiens}
Probab=97.29 E-value=8.9e-05 Score=71.03 Aligned_cols=74 Identities=12% Similarity=0.037 Sum_probs=64.1
Q ss_pred HHHHhhhHHHHcccHHHHHHHHHHHHHHhcccCCCChHHHHHHHHHHHHhHhHHHHHHHHhcCHHHHHHHHHHHHhcCCC
Q 011164 401 KKKEQGNTLFKAGKYARASKRYEKAVKYIEYDTSFGDEEKKQAKALKVACNLNNAACKLKLKDYKQAEKLCTKVQQQKKF 480 (492)
Q Consensus 401 ~~K~~Gn~~fk~~~~~~A~~~Y~~al~~l~~~~~~~~~~~~~~~~~~~~l~~N~a~~~lk~~~~~~ai~~~~~al~~dp~ 480 (492)
.+...|..+++.|+|.+|+..|+++++.-. ....++.|+|.|+.+++++++|+..+.++++++|+
T Consensus 238 ~~~~la~~~~~~g~~~~A~~~~~~a~~~~~---------------~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~p~ 302 (330)
T 3hym_B 238 LLNNLGHVCRKLKKYAEALDYHRQALVLIP---------------QNASTYSAIGYIHSLMGNFENAVDYFHTALGLRRD 302 (330)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHHHHHHHST---------------TCSHHHHHHHHHHHHHTCHHHHHHHHHTTTTTCSC
T ss_pred HHHHHHHHHHHhcCHHHHHHHHHHHHhhCc---------------cchHHHHHHHHHHHHhccHHHHHHHHHHHHccCCC
Confidence 455778889999999999999999998732 13668899999999999999999999999999999
Q ss_pred Cccceeeee
Q 011164 481 LLLPIFNIY 489 (492)
Q Consensus 481 n~KA~~r~~ 489 (492)
+..+++++.
T Consensus 303 ~~~~~~~l~ 311 (330)
T 3hym_B 303 DTFSVTMLG 311 (330)
T ss_dssp CHHHHHHHH
T ss_pred chHHHHHHH
Confidence 988776654
No 183
>2fo7_A Synthetic consensus TPR protein; tetratricopeptide repeat, consensus protein, superhelix, de novo protein; 2.30A {Synthetic} SCOP: k.38.1.1 PDB: 2hyz_A
Probab=97.28 E-value=0.00024 Score=57.65 Aligned_cols=34 Identities=18% Similarity=0.085 Sum_probs=27.2
Q ss_pred HHhHhHHHHHHHHhcCHHHHHHHHHHHHhcCCCC
Q 011164 448 VACNLNNAACKLKLKDYKQAEKLCTKVQQQKKFL 481 (492)
Q Consensus 448 ~~l~~N~a~~~lk~~~~~~ai~~~~~al~~dp~n 481 (492)
..++.++|.++.+++++++|+..+.++++++|++
T Consensus 103 ~~~~~~la~~~~~~~~~~~A~~~~~~~~~~~~~~ 136 (136)
T 2fo7_A 103 AEAWYNLGNAYYKQGDYDEAIEYYQKALELDPRS 136 (136)
T ss_dssp HHHHHHHHHHHHTTTCHHHHHHHHHHHHHHSTTC
T ss_pred hHHHHHHHHHHHHHccHHHHHHHHHHHHccCCCC
Confidence 4567788888888888888888888888887753
No 184
>3q15_A PSP28, response regulator aspartate phosphatase H; tetratricopeptide repeat, 3-helix bundle, phosphorelay signa transduction, phosphatase; 2.19A {Bacillus subtilis}
Probab=97.28 E-value=0.00037 Score=69.06 Aligned_cols=82 Identities=15% Similarity=0.029 Sum_probs=58.8
Q ss_pred HHHHHHHHhhhHHHHcccHHHHHHHHHHHHHHhcccCCCChHHHHHHHHHHHHhHhHHHHHHHHhcCHHHHHHHHHHHHh
Q 011164 397 EAAGKKKEQGNTLFKAGKYARASKRYEKAVKYIEYDTSFGDEEKKQAKALKVACNLNNAACKLKLKDYKQAEKLCTKVQQ 476 (492)
Q Consensus 397 ~~a~~~K~~Gn~~fk~~~~~~A~~~Y~~al~~l~~~~~~~~~~~~~~~~~~~~l~~N~a~~~lk~~~~~~ai~~~~~al~ 476 (492)
..+..+...|..++..|+|.+|+..|++|++....... ......++.|+|.||.++++|++|+.++.+|++
T Consensus 180 ~~~~~~~~lg~~y~~~~~~~~A~~~~~~al~~~~~~~~---------~~~~~~~~~~lg~~y~~~~~~~~A~~~~~~al~ 250 (378)
T 3q15_A 180 RTIQSLFVIAGNYDDFKHYDKALPHLEAALELAMDIQN---------DRFIAISLLNIANSYDRSGDDQMAVEHFQKAAK 250 (378)
T ss_dssp HHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTC---------HHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHH
T ss_pred hHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHcCC---------HHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHH
Confidence 34666678899999999999999999999987643211 234566777777777777777777777777777
Q ss_pred -----cCCCCccceee
Q 011164 477 -----QKKFLLLPIFN 487 (492)
Q Consensus 477 -----~dp~n~KA~~r 487 (492)
.+|....++++
T Consensus 251 ~~~~~~~~~~~~~~~~ 266 (378)
T 3q15_A 251 VSREKVPDLLPKVLFG 266 (378)
T ss_dssp HHHHHCGGGHHHHHHH
T ss_pred HHHhhCChhHHHHHHH
Confidence 55544444443
No 185
>3ro3_A PINS homolog, G-protein-signaling modulator 2; asymmetric cell division, protein binding; 1.10A {Mus musculus}
Probab=97.27 E-value=0.0012 Score=55.24 Aligned_cols=76 Identities=16% Similarity=0.099 Sum_probs=63.7
Q ss_pred HHHHHHHHHhhhHHHHcccHHHHHHHHHHHHHHhcccCCCChHHHHHHHHHHHHhHhHHHHHHHHhcCHHHHHHHHHHHH
Q 011164 396 IEAAGKKKEQGNTLFKAGKYARASKRYEKAVKYIEYDTSFGDEEKKQAKALKVACNLNNAACKLKLKDYKQAEKLCTKVQ 475 (492)
Q Consensus 396 l~~a~~~K~~Gn~~fk~~~~~~A~~~Y~~al~~l~~~~~~~~~~~~~~~~~~~~l~~N~a~~~lk~~~~~~ai~~~~~al 475 (492)
...+..+...|..++..++|.+|+..|++++........ ......++.|+|.++..+++|++|+..+.+++
T Consensus 6 ~~~~~~~~~l~~~~~~~~~~~~A~~~~~~al~~~~~~~~---------~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~a~ 76 (164)
T 3ro3_A 6 AAQGRAFGNLGNTHYLLGNFRDAVIAHEQRLLIAKEFGD---------KAAERIAYSNLGNAYIFLGEFETASEYYKKTL 76 (164)
T ss_dssp HHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHTC---------HHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHhCC---------chHHHHHHHHHHHHHHHcCCHHHHHHHHHHHH
Confidence 345777889999999999999999999999998653211 34456789999999999999999999999999
Q ss_pred hcCCC
Q 011164 476 QQKKF 480 (492)
Q Consensus 476 ~~dp~ 480 (492)
++.+.
T Consensus 77 ~~~~~ 81 (164)
T 3ro3_A 77 LLARQ 81 (164)
T ss_dssp HHHHH
T ss_pred HHHHH
Confidence 88653
No 186
>2c2l_A CHIP, carboxy terminus of HSP70-interacting protein; chaperone, E3 ligase, ubiquitinylation, TPR, heat-shock protein complex; 3.3A {Mus musculus} SCOP: a.118.8.1 g.44.1.2
Probab=97.27 E-value=0.00016 Score=68.79 Aligned_cols=70 Identities=14% Similarity=0.119 Sum_probs=60.5
Q ss_pred HHHHHhhhHHHHcccHHHHHHHHHHHHHHhcccCCCChHHHHHHHHHHHHhHhHHHHHHHHhcCHHHHHHHHHHHHhcCC
Q 011164 400 GKKKEQGNTLFKAGKYARASKRYEKAVKYIEYDTSFGDEEKKQAKALKVACNLNNAACKLKLKDYKQAEKLCTKVQQQKK 479 (492)
Q Consensus 400 ~~~K~~Gn~~fk~~~~~~A~~~Y~~al~~l~~~~~~~~~~~~~~~~~~~~l~~N~a~~~lk~~~~~~ai~~~~~al~~dp 479 (492)
..+...|..+++.|+|.+|+..|+++++.- +....+++|+|.++.++++|++|+..+.++++++|
T Consensus 39 ~~~~~la~~~~~~~~~~~A~~~~~~al~~~---------------p~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~l~p 103 (281)
T 2c2l_A 39 VYYTNRALCYLKMQQPEQALADCRRALELD---------------GQSVKAHFFLGQCQLEMESYDEAIANLQRAYSLAK 103 (281)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHTTSC---------------TTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhcCHHHHHHHHHHHHHhC---------------CCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCc
Confidence 456678999999999999999999999862 22367899999999999999999999999999999
Q ss_pred CCccc
Q 011164 480 FLLLP 484 (492)
Q Consensus 480 ~n~KA 484 (492)
++..+
T Consensus 104 ~~~~~ 108 (281)
T 2c2l_A 104 EQRLN 108 (281)
T ss_dssp HTTCC
T ss_pred cchhh
Confidence 77543
No 187
>4abn_A Tetratricopeptide repeat protein 5; P53 cofactor, stress-response, DNA repair, gene regulation; 2.05A {Mus musculus}
Probab=97.26 E-value=0.0001 Score=75.96 Aligned_cols=74 Identities=20% Similarity=0.078 Sum_probs=63.6
Q ss_pred HHHHHHhhhHHHHcccH-HHHHHHHHHHHHHhcccCCCChHHHHHHHHHHHHhHhHHHHHHHHhcCHHHHHHHHHHHHhc
Q 011164 399 AGKKKEQGNTLFKAGKY-ARASKRYEKAVKYIEYDTSFGDEEKKQAKALKVACNLNNAACKLKLKDYKQAEKLCTKVQQQ 477 (492)
Q Consensus 399 a~~~K~~Gn~~fk~~~~-~~A~~~Y~~al~~l~~~~~~~~~~~~~~~~~~~~l~~N~a~~~lk~~~~~~ai~~~~~al~~ 477 (492)
+..+...|..++..++| .+|+..|+++++.- +....+++|+|.||+++++|++|+..+.++|++
T Consensus 102 a~~~~~lg~~~~~~g~~~~~A~~~~~~al~~~---------------p~~~~a~~~lg~~~~~~g~~~~A~~~~~~al~~ 166 (474)
T 4abn_A 102 AQALMLKGKALNVTPDYSPEAEVLLSKAVKLE---------------PELVEAWNQLGEVYWKKGDVTSAHTCFSGALTH 166 (474)
T ss_dssp HHHHHHHHHHHTSSSSCCHHHHHHHHHHHHHC---------------TTCHHHHHHHHHHHHHHTCHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHHHhccccHHHHHHHHHHHHhhC---------------CCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHhh
Confidence 45667889999999999 99999999999872 223678999999999999999999999999999
Q ss_pred CCCCccceeee
Q 011164 478 KKFLLLPIFNI 488 (492)
Q Consensus 478 dp~n~KA~~r~ 488 (492)
+|+ ..+++++
T Consensus 167 ~p~-~~~~~~l 176 (474)
T 4abn_A 167 CKN-KVSLQNL 176 (474)
T ss_dssp CCC-HHHHHHH
T ss_pred CCC-HHHHHHH
Confidence 998 4666544
No 188
>3ulq_A Response regulator aspartate phosphatase F; tetratricopeptide repeat, response regulator helix-turn-HELX binding, 3-helix bundle; 2.30A {Bacillus subtilis}
Probab=97.26 E-value=0.00047 Score=68.33 Aligned_cols=72 Identities=15% Similarity=0.149 Sum_probs=57.2
Q ss_pred HHHHHHHHhhhHHHHcccHHHHHHHHHHHHHHhcccCCCChHHHHHHHHHHHHhHhHHHHHHHHhcCHHHHHHHHHHHHh
Q 011164 397 EAAGKKKEQGNTLFKAGKYARASKRYEKAVKYIEYDTSFGDEEKKQAKALKVACNLNNAACKLKLKDYKQAEKLCTKVQQ 476 (492)
Q Consensus 397 ~~a~~~K~~Gn~~fk~~~~~~A~~~Y~~al~~l~~~~~~~~~~~~~~~~~~~~l~~N~a~~~lk~~~~~~ai~~~~~al~ 476 (492)
..+..+...|..++..|+|.+|+..|++|++....... ......++.|+|.||.++++|++|+.++.+|++
T Consensus 182 ~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~~~~~~---------~~~~~~~~~~lg~~y~~~g~~~~A~~~~~~al~ 252 (383)
T 3ulq_A 182 RLLQCHSLFATNFLDLKQYEDAISHFQKAYSMAEAEKQ---------PQLMGRTLYNIGLCKNSQSQYEDAIPYFKRAIA 252 (383)
T ss_dssp HHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTC---------HHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHcCC---------hHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHH
Confidence 34556777889999999999999999999988654311 345567788888888888888888888888888
Q ss_pred c
Q 011164 477 Q 477 (492)
Q Consensus 477 ~ 477 (492)
+
T Consensus 253 ~ 253 (383)
T 3ulq_A 253 V 253 (383)
T ss_dssp H
T ss_pred H
Confidence 4
No 189
>1fch_A Peroxisomal targeting signal 1 receptor; protein-peptide complex, tetratricopeptide repeat, TPR, helical repeat, signaling protein; 2.20A {Homo sapiens} SCOP: a.118.8.1 PDB: 2j9q_A 3imz_B* 3r9a_B* 2c0m_A 2c0l_A
Probab=97.26 E-value=0.00024 Score=69.45 Aligned_cols=74 Identities=11% Similarity=0.041 Sum_probs=55.8
Q ss_pred HHHHHhhhHHHHcccHHHHHHHHHHHHHHhcccCCCChHHHHHHHHHHHHhHhHHHHHHHHhcCHHHHHHHHHHHHhcCC
Q 011164 400 GKKKEQGNTLFKAGKYARASKRYEKAVKYIEYDTSFGDEEKKQAKALKVACNLNNAACKLKLKDYKQAEKLCTKVQQQKK 479 (492)
Q Consensus 400 ~~~K~~Gn~~fk~~~~~~A~~~Y~~al~~l~~~~~~~~~~~~~~~~~~~~l~~N~a~~~lk~~~~~~ai~~~~~al~~dp 479 (492)
..+...|..+++.|+|.+|+..|+++++.-.. ...+++|+|.++.++++|++|+..++++++++|
T Consensus 218 ~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~~---------------~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~ 282 (368)
T 1fch_A 218 DVQCGLGVLFNLSGEYDKAVDCFTAALSVRPN---------------DYLLWNKLGATLANGNQSEEAVAAYRRALELQP 282 (368)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTT---------------CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCT
T ss_pred HHHHHHHHHHHHcCCHHHHHHHHHHHHHhCcC---------------CHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCC
Confidence 44566788888899999999999999876221 245677788888888888888888888888887
Q ss_pred CCccceeee
Q 011164 480 FLLLPIFNI 488 (492)
Q Consensus 480 ~n~KA~~r~ 488 (492)
++..+++++
T Consensus 283 ~~~~~~~~l 291 (368)
T 1fch_A 283 GYIRSRYNL 291 (368)
T ss_dssp TCHHHHHHH
T ss_pred CcHHHHHHH
Confidence 777666544
No 190
>2ifu_A Gamma-SNAP; membrane fusion, snare complex disassembly, protein structure initiative, PSI, center for eukaryotic structural genomics, CESG; HET: MSE; 2.60A {Danio rerio}
Probab=97.25 E-value=0.0012 Score=63.39 Aligned_cols=76 Identities=13% Similarity=0.041 Sum_probs=54.9
Q ss_pred HHHHHHhhhHHHHcccHHHHHHHHHHHHHHhcccCCCChHHHHHHHHHHHHhHhHHHHHHHHhcCHHHHHHHHHHHHhcC
Q 011164 399 AGKKKEQGNTLFKAGKYARASKRYEKAVKYIEYDTSFGDEEKKQAKALKVACNLNNAACKLKLKDYKQAEKLCTKVQQQK 478 (492)
Q Consensus 399 a~~~K~~Gn~~fk~~~~~~A~~~Y~~al~~l~~~~~~~~~~~~~~~~~~~~l~~N~a~~~lk~~~~~~ai~~~~~al~~d 478 (492)
+..+...|..+++.|+|.+|+..|+++++....... ......+++|++.|++.++++.+|+.++++++ ++
T Consensus 155 ~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~~~~~~---------~~~~~~~~~~~g~~~~~~g~~~~A~~~~~~al-~~ 224 (307)
T 2ifu_A 155 AELIGKASRLLVRQQKFDEAAASLQKEKSMYKEMEN---------YPTCYKKCIAQVLVQLHRADYVAAQKCVRESY-SI 224 (307)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTC---------HHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHT-TS
T ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHcCC---------hhHHHHHHHHHHHHHHHcCCHHHHHHHHHHHh-CC
Confidence 344556677777777888888888887776432211 12334578899999999999999999999999 98
Q ss_pred CCCccc
Q 011164 479 KFLLLP 484 (492)
Q Consensus 479 p~n~KA 484 (492)
|.+..+
T Consensus 225 p~~~~~ 230 (307)
T 2ifu_A 225 PGFSGS 230 (307)
T ss_dssp TTSTTS
T ss_pred CCCCCC
Confidence 876543
No 191
>2ifu_A Gamma-SNAP; membrane fusion, snare complex disassembly, protein structure initiative, PSI, center for eukaryotic structural genomics, CESG; HET: MSE; 2.60A {Danio rerio}
Probab=97.25 E-value=0.00056 Score=65.79 Aligned_cols=74 Identities=12% Similarity=0.060 Sum_probs=55.0
Q ss_pred HHHHHHhhhHHHHcccHHHHHHHHHHHHHHhcccCCCChHHHHHHHHHHHHhHhHHHHHHHHhcCHHHHHHHHHHHHhcC
Q 011164 399 AGKKKEQGNTLFKAGKYARASKRYEKAVKYIEYDTSFGDEEKKQAKALKVACNLNNAACKLKLKDYKQAEKLCTKVQQQK 478 (492)
Q Consensus 399 a~~~K~~Gn~~fk~~~~~~A~~~Y~~al~~l~~~~~~~~~~~~~~~~~~~~l~~N~a~~~lk~~~~~~ai~~~~~al~~d 478 (492)
+..+...|..+.+ |+|.+|+..|++|+.+...... ......+++|+|.++.++++|++|+..+.+++++.
T Consensus 116 a~~~~~lg~~~~~-g~~~~A~~~~~~Al~~~~~~~~---------~~~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~ 185 (307)
T 2ifu_A 116 AMALDRAGKLMEP-LDLSKAVHLYQQAAAVFENEER---------LRQAAELIGKASRLLVRQQKFDEAAASLQKEKSMY 185 (307)
T ss_dssp HHHHHHHHHHHTT-TCHHHHHHHHHHHHHHHHHTTC---------HHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHc-CCHHHHHHHHHHHHHHHHhCCC---------hhHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHH
Confidence 4455566666666 7788888888887776432111 22446789999999999999999999999999987
Q ss_pred CCCc
Q 011164 479 KFLL 482 (492)
Q Consensus 479 p~n~ 482 (492)
|.+.
T Consensus 186 ~~~~ 189 (307)
T 2ifu_A 186 KEME 189 (307)
T ss_dssp HHTT
T ss_pred HHcC
Confidence 6543
No 192
>2vsy_A XCC0866; transferase, glycosyl transferase, GT-B, OGT, protein O-GLCN; HET: NHE; 2.10A {Xanthomonas campestris PV} PDB: 2jlb_A* 2xgm_A* 2xgo_A* 2xgs_A* 2vsn_A*
Probab=97.25 E-value=0.00017 Score=75.97 Aligned_cols=87 Identities=8% Similarity=-0.037 Sum_probs=60.7
Q ss_pred HHHHhhhHHHHcccHHHHHHHHHHHHHHhcccC-------------CCChHHHHH------HHHHHHHhHhHHHHHHHHh
Q 011164 401 KKKEQGNTLFKAGKYARASKRYEKAVKYIEYDT-------------SFGDEEKKQ------AKALKVACNLNNAACKLKL 461 (492)
Q Consensus 401 ~~K~~Gn~~fk~~~~~~A~~~Y~~al~~l~~~~-------------~~~~~~~~~------~~~~~~~l~~N~a~~~lk~ 461 (492)
.+...|..+++.|+|++|+..|+++++.-.... ...++.... ..+....++.|++.++.++
T Consensus 59 ~~~~lg~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~l~~~~~~~ 138 (568)
T 2vsy_A 59 AVARLGRVRWTQQRHAEAAVLLQQASDAAPEHPGIALWLGHALEDAGQAEAAAAAYTRAHQLLPEEPYITAQLLNWRRRL 138 (568)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHCCCHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHh
Confidence 455667777778888888888888877532110 000011111 1223356889999999999
Q ss_pred ---cCHHHHHHHHHHHHhcCCCCccceee
Q 011164 462 ---KDYKQAEKLCTKVQQQKKFLLLPIFN 487 (492)
Q Consensus 462 ---~~~~~ai~~~~~al~~dp~n~KA~~r 487 (492)
+++++|+..+.++++.+|++..+++.
T Consensus 139 ~~~g~~~~A~~~~~~al~~~p~~~~~~~~ 167 (568)
T 2vsy_A 139 CDWRALDVLSAQVRAAVAQGVGAVEPFAF 167 (568)
T ss_dssp TCCTTHHHHHHHHHHHHHHTCCCSCHHHH
T ss_pred hccccHHHHHHHHHHHHhcCCcccChHHH
Confidence 99999999999999999998877654
No 193
>3as5_A MAMA; tetratricopeptide repeats (TPR) containing protein, TPR PROT protein-protein interactions, protein binding; 2.00A {Magnetospirillum magnetotacticum} PDB: 3as4_A 3asd_A 3asg_A 3ash_A 3as8_A 3asf_A
Probab=97.23 E-value=0.00032 Score=60.64 Aligned_cols=87 Identities=9% Similarity=-0.034 Sum_probs=46.8
Q ss_pred HHHHhhhHHHHcccHHHHHHHHHHHHHHhcccCC-------------CChHHHHHH------HHHHHHhHhHHHHHHHHh
Q 011164 401 KKKEQGNTLFKAGKYARASKRYEKAVKYIEYDTS-------------FGDEEKKQA------KALKVACNLNNAACKLKL 461 (492)
Q Consensus 401 ~~K~~Gn~~fk~~~~~~A~~~Y~~al~~l~~~~~-------------~~~~~~~~~------~~~~~~l~~N~a~~~lk~ 461 (492)
.+...|..++..|++.+|+..|+++++....... ..++....+ .+....++.++|.++.++
T Consensus 44 ~~~~~~~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~~a~~~~~~ 123 (186)
T 3as5_A 44 VALHLGIAYVKTGAVDRGTELLERSLADAPDNVKVATVLGLTYVQVQKYDLAVPLLIKVAEANPINFNVRFRLGVALDNL 123 (186)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHcCCHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHhcCHHHHHHHHHHHHhcCcHhHHHHHHHHHHHHHc
Confidence 3455666666777777777777777665211000 000000000 111234566677777777
Q ss_pred cCHHHHHHHHHHHHhcCCCCccceee
Q 011164 462 KDYKQAEKLCTKVQQQKKFLLLPIFN 487 (492)
Q Consensus 462 ~~~~~ai~~~~~al~~dp~n~KA~~r 487 (492)
++|++|+..+.++++.+|.+..+++.
T Consensus 124 ~~~~~A~~~~~~~~~~~~~~~~~~~~ 149 (186)
T 3as5_A 124 GRFDEAIDSFKIALGLRPNEGKVHRA 149 (186)
T ss_dssp TCHHHHHHHHHHHHHHCTTCHHHHHH
T ss_pred CcHHHHHHHHHHHHhcCccchHHHHH
Confidence 77777777777777776666555543
No 194
>3u4t_A TPR repeat-containing protein; structural genomics, PSI- protein structure initiative, northeast structural genomics consortium, NESG; 2.28A {Cytophaga hutchinsonii}
Probab=97.22 E-value=0.00057 Score=63.58 Aligned_cols=75 Identities=16% Similarity=-0.026 Sum_probs=53.1
Q ss_pred HHhhhHHHHcccHHHHHHHHHHHHHHhcccCCCChHHHHHHHHHHHHhHhHHHHHHHHhcCHHHHHHHHHHHHhcCCCCc
Q 011164 403 KEQGNTLFKAGKYARASKRYEKAVKYIEYDTSFGDEEKKQAKALKVACNLNNAACKLKLKDYKQAEKLCTKVQQQKKFLL 482 (492)
Q Consensus 403 K~~Gn~~fk~~~~~~A~~~Y~~al~~l~~~~~~~~~~~~~~~~~~~~l~~N~a~~~lk~~~~~~ai~~~~~al~~dp~n~ 482 (492)
...|..+++.|+|.+|+..|++++. ..... .....++.++|.|+.++++|++|+..+.++++++|++.
T Consensus 41 ~~l~~~~~~~~~~~~A~~~~~~a~~-~~~~~-----------~~~~~~~~~lg~~~~~~~~~~~A~~~~~~a~~~~~~~~ 108 (272)
T 3u4t_A 41 NRRAVCYYELAKYDLAQKDIETYFS-KVNAT-----------KAKSADFEYYGKILMKKGQDSLAIQQYQAAVDRDTTRL 108 (272)
T ss_dssp HHHHHHHHHTTCHHHHHHHHHHHHT-TSCTT-----------TCCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHSTTCT
T ss_pred HHHHHHHHHHhhHHHHHHHHHHHHh-ccCch-----------hHHHHHHHHHHHHHHHcccHHHHHHHHHHHHhcCcccH
Confidence 3445555566666666666666665 21111 12355689999999999999999999999999999998
Q ss_pred cceeeee
Q 011164 483 LPIFNIY 489 (492)
Q Consensus 483 KA~~r~~ 489 (492)
.+++++.
T Consensus 109 ~~~~~l~ 115 (272)
T 3u4t_A 109 DMYGQIG 115 (272)
T ss_dssp HHHHHHH
T ss_pred HHHHHHH
Confidence 8776543
No 195
>1qqe_A Vesicular transport protein SEC17; helix-turn-helix TPR-like repeat, protein transport; 2.90A {Saccharomyces cerevisiae} SCOP: a.118.8.1
Probab=97.21 E-value=0.0008 Score=64.18 Aligned_cols=74 Identities=11% Similarity=-0.020 Sum_probs=57.7
Q ss_pred HHHHHHhhhHHHHcccHHHHHHHHHHHHHHhcccCCCChHHHHHHHHHHHHhHhHHHHHHHHh-cCHHHHHHHHHHHHhc
Q 011164 399 AGKKKEQGNTLFKAGKYARASKRYEKAVKYIEYDTSFGDEEKKQAKALKVACNLNNAACKLKL-KDYKQAEKLCTKVQQQ 477 (492)
Q Consensus 399 a~~~K~~Gn~~fk~~~~~~A~~~Y~~al~~l~~~~~~~~~~~~~~~~~~~~l~~N~a~~~lk~-~~~~~ai~~~~~al~~ 477 (492)
+..+...|+.+.+.|+|.+|+..|++|+.+...... ......++.|+|.+|.++ ++|++|+.++++||++
T Consensus 77 a~~~~~lg~~~~~~g~~~~A~~~~~~Al~l~~~~g~---------~~~~a~~~~~lg~~~~~~lg~~~~A~~~~~~Al~~ 147 (292)
T 1qqe_A 77 GNTYVEAYKCFKSGGNSVNAVDSLENAIQIFTHRGQ---------FRRGANFKFELGEILENDLHDYAKAIDCYELAGEW 147 (292)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTC---------HHHHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHcCC---------HHHHHHHHHHHHHHHHHhhcCHHHHHHHHHHHHHH
Confidence 556667788888888888888888888877532111 123466899999999995 9999999999999999
Q ss_pred CCCC
Q 011164 478 KKFL 481 (492)
Q Consensus 478 dp~n 481 (492)
.|.+
T Consensus 148 ~~~~ 151 (292)
T 1qqe_A 148 YAQD 151 (292)
T ss_dssp HHHT
T ss_pred HHhC
Confidence 8754
No 196
>2e2e_A Formate-dependent nitrite reductase complex NRFG; TPR, cytochrome C biogenesis, O157:H7 EDL933, formate- nitrite reductase complex, lyase; 2.05A {Escherichia coli}
Probab=97.20 E-value=0.00055 Score=59.59 Aligned_cols=28 Identities=14% Similarity=0.177 Sum_probs=20.2
Q ss_pred HHHHhhhH-HHHcccH--HHHHHHHHHHHHH
Q 011164 401 KKKEQGNT-LFKAGKY--ARASKRYEKAVKY 428 (492)
Q Consensus 401 ~~K~~Gn~-~fk~~~~--~~A~~~Y~~al~~ 428 (492)
.+...|.. +++.++| .+|+..|+++++.
T Consensus 80 ~~~~la~~l~~~~~~~~~~~A~~~~~~al~~ 110 (177)
T 2e2e_A 80 LYAALATVLYYQASQHMTAQTRAMIDKALAL 110 (177)
T ss_dssp HHHHHHHHHHHHTTTCCCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhcCCcchHHHHHHHHHHHHh
Confidence 34456666 5677887 8888888888876
No 197
>2r5s_A Uncharacterized protein VP0806; APC090868.1, vibrio parahaemolyticus RIMD 22 structural genomics, PSI-2, protein structure initiative; HET: MES; 2.14A {Vibrio parahaemolyticus}
Probab=97.20 E-value=0.0002 Score=62.75 Aligned_cols=67 Identities=18% Similarity=0.188 Sum_probs=58.2
Q ss_pred HHHHhhhHHHHcccHHHHHHHHHHHHHHhcccCCCChHHHHHHHHHHHHhHhHHHHHHHHhcCHHHHHHHHHHHHhcCCC
Q 011164 401 KKKEQGNTLFKAGKYARASKRYEKAVKYIEYDTSFGDEEKKQAKALKVACNLNNAACKLKLKDYKQAEKLCTKVQQQKKF 480 (492)
Q Consensus 401 ~~K~~Gn~~fk~~~~~~A~~~Y~~al~~l~~~~~~~~~~~~~~~~~~~~l~~N~a~~~lk~~~~~~ai~~~~~al~~dp~ 480 (492)
.+...|..+++.|+|.+|+..|+++++. .+....++.|+|.+++++|+|++|+..+++++.++|
T Consensus 8 ~~~~~a~~~~~~g~~~~A~~~~~~al~~---------------~P~~~~a~~~la~~~~~~g~~~~A~~~~~~a~~~~p- 71 (176)
T 2r5s_A 8 QLLKQVSELLQQGEHAQALNVIQTLSDE---------------LQSRGDVKLAKADCLLETKQFELAQELLATIPLEYQ- 71 (176)
T ss_dssp THHHHHHHHHHTTCHHHHHHHHHTSCHH---------------HHTSHHHHHHHHHHHHHTTCHHHHHHHHTTCCGGGC-
T ss_pred HHHHHHHHHHHcCCHHHHHHHHHHHHHH---------------CCCcHHHHHHHHHHHHHCCCHHHHHHHHHHhhhccC-
Confidence 4567889999999999999999999986 455578899999999999999999999999999888
Q ss_pred Ccc
Q 011164 481 LLL 483 (492)
Q Consensus 481 n~K 483 (492)
+..
T Consensus 72 ~~~ 74 (176)
T 2r5s_A 72 DNS 74 (176)
T ss_dssp CHH
T ss_pred ChH
Confidence 653
No 198
>3as5_A MAMA; tetratricopeptide repeats (TPR) containing protein, TPR PROT protein-protein interactions, protein binding; 2.00A {Magnetospirillum magnetotacticum} PDB: 3as4_A 3asd_A 3asg_A 3ash_A 3as8_A 3asf_A
Probab=97.19 E-value=0.00035 Score=60.36 Aligned_cols=83 Identities=13% Similarity=-0.039 Sum_probs=54.5
Q ss_pred HHHhhhHHHHcccHHHHHHHHHHHHHHhcccC-------------CCChHHHHHH------HHHHHHhHhHHHHHHHHhc
Q 011164 402 KKEQGNTLFKAGKYARASKRYEKAVKYIEYDT-------------SFGDEEKKQA------KALKVACNLNNAACKLKLK 462 (492)
Q Consensus 402 ~K~~Gn~~fk~~~~~~A~~~Y~~al~~l~~~~-------------~~~~~~~~~~------~~~~~~l~~N~a~~~lk~~ 462 (492)
+...|..+++.+++.+|+..|+++++...... ...++....+ .+....++.++|.++.+++
T Consensus 79 ~~~~a~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~la~~~~~~~ 158 (186)
T 3as5_A 79 ATVLGLTYVQVQKYDLAVPLLIKVAEANPINFNVRFRLGVALDNLGRFDEAIDSFKIALGLRPNEGKVHRAIAFSYEQMG 158 (186)
T ss_dssp HHHHHHHHHHHTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHhcCHHHHHHHHHHHHhcCcHhHHHHHHHHHHHHHcCcHHHHHHHHHHHHhcCccchHHHHHHHHHHHHcC
Confidence 34556666677777777777777766532110 0000000111 1123568899999999999
Q ss_pred CHHHHHHHHHHHHhcCCCCccc
Q 011164 463 DYKQAEKLCTKVQQQKKFLLLP 484 (492)
Q Consensus 463 ~~~~ai~~~~~al~~dp~n~KA 484 (492)
++++|+..+.++++++|++..+
T Consensus 159 ~~~~A~~~~~~~~~~~~~~~~~ 180 (186)
T 3as5_A 159 RHEEALPHFKKANELDEGASVE 180 (186)
T ss_dssp CHHHHHHHHHHHHHHHHCCCGG
T ss_pred CHHHHHHHHHHHHHcCCCchhh
Confidence 9999999999999999987654
No 199
>3qky_A Outer membrane assembly lipoprotein YFIO; membrane protein; 2.15A {Rhodothermus marinus}
Probab=97.19 E-value=0.00059 Score=63.58 Aligned_cols=75 Identities=16% Similarity=0.158 Sum_probs=63.4
Q ss_pred HHHHHHhhhHHHHcccHHHHHHHHHHHHHHhcccCCCChHHHHHHHHHHHHhHhHHHHHHHH--------hcCHHHHHHH
Q 011164 399 AGKKKEQGNTLFKAGKYARASKRYEKAVKYIEYDTSFGDEEKKQAKALKVACNLNNAACKLK--------LKDYKQAEKL 470 (492)
Q Consensus 399 a~~~K~~Gn~~fk~~~~~~A~~~Y~~al~~l~~~~~~~~~~~~~~~~~~~~l~~N~a~~~lk--------~~~~~~ai~~ 470 (492)
...+...|..+++.|+|.+|+..|+++++..... +....++.++|.|+++ +++|.+|+..
T Consensus 52 ~~a~~~lg~~~~~~~~~~~A~~~~~~~l~~~p~~------------~~~~~a~~~lg~~~~~~~~~~~~~~~~~~~A~~~ 119 (261)
T 3qky_A 52 ADAQFYLARAYYQNKEYLLAASEYERFIQIYQID------------PRVPQAEYERAMCYYKLSPPYELDQTDTRKAIEA 119 (261)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTC------------TTHHHHHHHHHHHHHHHCCCTTSCCHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhCcHHHHHHHHHHHHHHCCCC------------chhHHHHHHHHHHHHHhcccccccchhHHHHHHH
Confidence 4556788999999999999999999999874321 1235678999999999 9999999999
Q ss_pred HHHHHhcCCCCccce
Q 011164 471 CTKVQQQKKFLLLPI 485 (492)
Q Consensus 471 ~~~al~~dp~n~KA~ 485 (492)
++++++.+|++..+.
T Consensus 120 ~~~~l~~~p~~~~~~ 134 (261)
T 3qky_A 120 FQLFIDRYPNHELVD 134 (261)
T ss_dssp HHHHHHHCTTCTTHH
T ss_pred HHHHHHHCcCchhHH
Confidence 999999999987554
No 200
>2q7f_A YRRB protein; TPR, protein binding; 2.49A {Bacillus subtilis} SCOP: k.38.1.1
Probab=97.16 E-value=0.00026 Score=64.55 Aligned_cols=87 Identities=18% Similarity=0.073 Sum_probs=56.4
Q ss_pred HHHHhhhHHHHcccHHHHHHHHHHHHHHhcccC-------------CCChHHHHHH------HHHHHHhHhHHHHHHHHh
Q 011164 401 KKKEQGNTLFKAGKYARASKRYEKAVKYIEYDT-------------SFGDEEKKQA------KALKVACNLNNAACKLKL 461 (492)
Q Consensus 401 ~~K~~Gn~~fk~~~~~~A~~~Y~~al~~l~~~~-------------~~~~~~~~~~------~~~~~~l~~N~a~~~lk~ 461 (492)
.+...|..+++.|++.+|+..|+++++...... ...++....+ .+....++.++|.|+.++
T Consensus 127 ~~~~~a~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~la~~~~~~ 206 (243)
T 2q7f_A 127 LFYMLGTVLVKLEQPKLALPYLQRAVELNENDTEARFQFGMCLANEGMLDEALSQFAAVTEQDPGHADAFYNAGVTYAYK 206 (243)
T ss_dssp HHHHHHHHHHHTSCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHTCCHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHhccHHHHHHHHHHHHHhCCccHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCcccHHHHHHHHHHHHHc
Confidence 455667777777778888877777776532110 0001111111 112245788888899999
Q ss_pred cCHHHHHHHHHHHHhcCCCCccceee
Q 011164 462 KDYKQAEKLCTKVQQQKKFLLLPIFN 487 (492)
Q Consensus 462 ~~~~~ai~~~~~al~~dp~n~KA~~r 487 (492)
+++++|+..++++++++|++..+++.
T Consensus 207 ~~~~~A~~~~~~~~~~~p~~~~~~~~ 232 (243)
T 2q7f_A 207 ENREKALEMLDKAIDIQPDHMLALHA 232 (243)
T ss_dssp TCTTHHHHHHHHHHHHCTTCHHHHHH
T ss_pred cCHHHHHHHHHHHHccCcchHHHHHH
Confidence 99999999999999998888776654
No 201
>3qww_A SET and MYND domain-containing protein 2; methyltransferase, HSP90, transferase-transferase inhibitor; HET: SFG; 1.80A {Mus musculus} PDB: 3qwv_A* 3s7d_A* 3s7b_A* 3s7f_A* 3s7j_A* 3tg4_A* 3tg5_A* 3rib_A*
Probab=97.16 E-value=0.0011 Score=67.37 Aligned_cols=74 Identities=12% Similarity=-0.067 Sum_probs=62.2
Q ss_pred HHHHHHHHhhhHHHHcccHHHHHHHHHHHHHHhcccCCCChHHHHHHHHHHHHhHhHHHHHHHHhcCHHHHHHHHHHHHh
Q 011164 397 EAAGKKKEQGNTLFKAGKYARASKRYEKAVKYIEYDTSFGDEEKKQAKALKVACNLNNAACKLKLKDYKQAEKLCTKVQQ 476 (492)
Q Consensus 397 ~~a~~~K~~Gn~~fk~~~~~~A~~~Y~~al~~l~~~~~~~~~~~~~~~~~~~~l~~N~a~~~lk~~~~~~ai~~~~~al~ 476 (492)
..+..+-..|..+..+|+|.+|+..|+++|...+...... .+.....++|+|..|..+|+|++|+..+.+||+
T Consensus 338 ~~a~~~~nLa~~y~~~g~~~eA~~~~~~aL~i~~~~lG~~-------Hp~~a~~l~nLa~~~~~qg~~~eA~~~~~~Al~ 410 (433)
T 3qww_A 338 YMLHMMYQAMGVCLYMQDWEGALKYGQKIIKPYSKHYPVY-------SLNVASMWLKLGRLYMGLENKAAGEKALKKAIA 410 (433)
T ss_dssp HHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHSCSS-------CHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHhhcCHHHHHHHHHHHHHHHHHHcCCC-------ChHHHHHHHHHHHHHHhccCHHHHHHHHHHHHH
Confidence 4566677889999999999999999999998865432222 445678899999999999999999999999998
Q ss_pred c
Q 011164 477 Q 477 (492)
Q Consensus 477 ~ 477 (492)
+
T Consensus 411 i 411 (433)
T 3qww_A 411 I 411 (433)
T ss_dssp H
T ss_pred H
Confidence 7
No 202
>2q7f_A YRRB protein; TPR, protein binding; 2.49A {Bacillus subtilis} SCOP: k.38.1.1
Probab=97.14 E-value=0.00041 Score=63.22 Aligned_cols=89 Identities=16% Similarity=0.004 Sum_probs=49.7
Q ss_pred HHHHHhhhHHHHcccHHHHHHHHHHHHHHhcccC-------------CCChHHHHHH------HHHHHHhHhHHHHHHHH
Q 011164 400 GKKKEQGNTLFKAGKYARASKRYEKAVKYIEYDT-------------SFGDEEKKQA------KALKVACNLNNAACKLK 460 (492)
Q Consensus 400 ~~~K~~Gn~~fk~~~~~~A~~~Y~~al~~l~~~~-------------~~~~~~~~~~------~~~~~~l~~N~a~~~lk 460 (492)
..+...|..+++.|++.+|+..|+++++...... ...++....+ .+....++.++|.++++
T Consensus 58 ~~~~~la~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~la~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~~a~~~~~ 137 (243)
T 2q7f_A 58 IPYINFANLLSSVNELERALAFYDKALELDSSAATAYYGAGNVYVVKEMYKEAKDMFEKALRAGMENGDLFYMLGTVLVK 137 (243)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHTCCSHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHcCCHHHHHHHHHHHHHcCCcchHHHHHHHHHHHHhccHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHH
Confidence 3445566666677777777777777665422100 0000000000 11123456777777777
Q ss_pred hcCHHHHHHHHHHHHhcCCCCccceeee
Q 011164 461 LKDYKQAEKLCTKVQQQKKFLLLPIFNI 488 (492)
Q Consensus 461 ~~~~~~ai~~~~~al~~dp~n~KA~~r~ 488 (492)
+++|++|+..+.++++++|++..+++.+
T Consensus 138 ~~~~~~A~~~~~~~~~~~~~~~~~~~~l 165 (243)
T 2q7f_A 138 LEQPKLALPYLQRAVELNENDTEARFQF 165 (243)
T ss_dssp TSCHHHHHHHHHHHHHHCTTCHHHHHHH
T ss_pred hccHHHHHHHHHHHHHhCCccHHHHHHH
Confidence 7777777777777777777766655443
No 203
>2ho1_A Type 4 fimbrial biogenesis protein PILF; type IV pilus biogenesis, TPR, superhelix, protein binding; HET: MSE; 2.00A {Pseudomonas aeruginosa} PDB: 2fi7_A
Probab=97.13 E-value=0.00024 Score=65.42 Aligned_cols=71 Identities=13% Similarity=-0.021 Sum_probs=41.8
Q ss_pred HHHHHHhhhHHHHcccHHHHHHHHHHHHHHhcccCCCChHHHHHHHHHHHHhHhHHHHHHHHhcCHHHHHHHHHHHHhcC
Q 011164 399 AGKKKEQGNTLFKAGKYARASKRYEKAVKYIEYDTSFGDEEKKQAKALKVACNLNNAACKLKLKDYKQAEKLCTKVQQQK 478 (492)
Q Consensus 399 a~~~K~~Gn~~fk~~~~~~A~~~Y~~al~~l~~~~~~~~~~~~~~~~~~~~l~~N~a~~~lk~~~~~~ai~~~~~al~~d 478 (492)
+..+...|..++..|+|.+|+..|+++++.... ...++.++|.++.++++|++|+..+.++++++
T Consensus 37 ~~~~~~~a~~~~~~~~~~~A~~~~~~al~~~~~---------------~~~~~~~la~~~~~~~~~~~A~~~~~~a~~~~ 101 (252)
T 2ho1_A 37 RDAYIQLGLGYLQRGNTEQAKVPLRKALEIDPS---------------SADAHAALAVVFQTEMEPKLADEEYRKALASD 101 (252)
T ss_dssp HHHHHHHHHHHHHTTCTGGGHHHHHHHHHHCTT---------------CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHC
T ss_pred HHHHHHHHHHHHHcCChHHHHHHHHHHHhcCCC---------------hHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHC
Confidence 566777888888888888888888888875211 12344444444444444444444444444444
Q ss_pred CCCccc
Q 011164 479 KFLLLP 484 (492)
Q Consensus 479 p~n~KA 484 (492)
|.+..+
T Consensus 102 ~~~~~~ 107 (252)
T 2ho1_A 102 SRNARV 107 (252)
T ss_dssp TTCHHH
T ss_pred cCcHHH
Confidence 444333
No 204
>3hym_B Cell division cycle protein 16 homolog; APC, anaphase promoting complex, cell cycle, mitosis, cyclosome, TPR, ubiquitin, ubiquitin ligase, twinning; 2.80A {Homo sapiens}
Probab=97.12 E-value=0.00046 Score=65.93 Aligned_cols=83 Identities=18% Similarity=0.016 Sum_probs=59.5
Q ss_pred HHHHhhhHHHHcccHHHHHHHHHHHHHHhcccCCCChHHHHHHHHHHHHhHhHHHHHHHHhcCHHHHHHHHHHHHhcCCC
Q 011164 401 KKKEQGNTLFKAGKYARASKRYEKAVKYIEYDTSFGDEEKKQAKALKVACNLNNAACKLKLKDYKQAEKLCTKVQQQKKF 480 (492)
Q Consensus 401 ~~K~~Gn~~fk~~~~~~A~~~Y~~al~~l~~~~~~~~~~~~~~~~~~~~l~~N~a~~~lk~~~~~~ai~~~~~al~~dp~ 480 (492)
.+...|..+++.|+|.+|+..|+++++.......... .+....++.|+|.|+.++++|++|+..++++++++|+
T Consensus 195 ~~~~l~~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~------~~~~~~~~~~la~~~~~~g~~~~A~~~~~~a~~~~~~ 268 (330)
T 3hym_B 195 VMHEVGVVAFQNGEWKTAEKWFLDALEKIKAIGNEVT------VDKWEPLLNNLGHVCRKLKKYAEALDYHRQALVLIPQ 268 (330)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHHHHHHHHTTTSCSCT------TTTCCHHHHHHHHHHHHTTCHHHHHHHHHHHHHHSTT
T ss_pred HHHHHHHHHHHcccHHHHHHHHHHHHHHhhhcccccc------ccHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHhhCcc
Confidence 3455666667777777777777777765432111000 0112468899999999999999999999999999999
Q ss_pred Cccceeeee
Q 011164 481 LLLPIFNIY 489 (492)
Q Consensus 481 n~KA~~r~~ 489 (492)
+..+++++.
T Consensus 269 ~~~~~~~la 277 (330)
T 3hym_B 269 NASTYSAIG 277 (330)
T ss_dssp CSHHHHHHH
T ss_pred chHHHHHHH
Confidence 988877653
No 205
>1w3b_A UDP-N-acetylglucosamine--peptide N-acetylglucosaminyltransferase 110; OGT, glcnac, nucleoporin, O-linked glycosylation, TPR repeat, protein binding; 2.85A {Homo sapiens} SCOP: a.118.8.1
Probab=97.12 E-value=0.00036 Score=69.05 Aligned_cols=30 Identities=23% Similarity=0.364 Sum_probs=25.4
Q ss_pred HHHHHHhhhHHHHcccHHHHHHHHHHHHHH
Q 011164 399 AGKKKEQGNTLFKAGKYARASKRYEKAVKY 428 (492)
Q Consensus 399 a~~~K~~Gn~~fk~~~~~~A~~~Y~~al~~ 428 (492)
+..+...|+.+++.|+|.+|+..|+++++.
T Consensus 67 ~~~~~~lg~~~~~~g~~~~A~~~~~~al~~ 96 (388)
T 1w3b_A 67 AEAYSNLGNVYKERGQLQEAIEHYRHALRL 96 (388)
T ss_dssp HHHHHHHHHHHHHHTCHHHHHHHHHHHHHH
T ss_pred hHHHHHHHHHHHHCCCHHHHHHHHHHHHHc
Confidence 345677888999999999999999999876
No 206
>3n71_A Histone lysine methyltransferase SMYD1; heart development, transcription; HET: SFG MES; 2.30A {Mus musculus}
Probab=97.10 E-value=0.0016 Score=67.04 Aligned_cols=78 Identities=13% Similarity=0.061 Sum_probs=65.0
Q ss_pred HHHHHHHHHHHHhhhHHHHcccHHHHHHHHHHHHHHhcccCCCChHHHHHHHHHHHHhHhHHHHHHHHhcCHHHHHHHHH
Q 011164 393 EEKIEAAGKKKEQGNTLFKAGKYARASKRYEKAVKYIEYDTSFGDEEKKQAKALKVACNLNNAACKLKLKDYKQAEKLCT 472 (492)
Q Consensus 393 ~e~l~~a~~~K~~Gn~~fk~~~~~~A~~~Y~~al~~l~~~~~~~~~~~~~~~~~~~~l~~N~a~~~lk~~~~~~ai~~~~ 472 (492)
.+.++.+..+.+.+..+..+|+|.+|+..|+++|.......... .......++|+|.+|..+|+|++|+..+.
T Consensus 303 ~~~l~~a~~~le~a~~~~~qg~~~eA~~l~~~aL~~~~~~lg~~-------Hp~~a~~~~nLa~~y~~~g~~~eA~~~~~ 375 (490)
T 3n71_A 303 KEMIQFSKDTLEKIDKARSEGLYHEVVKLCRECLEKQEPVFADT-------NLYVLRLLSIASEVLSYLQAYEEASHYAR 375 (490)
T ss_dssp HHHHHHHHHHHHHHHHHHTTTCHHHHHHHHHHHHHHHTTTBCTT-------SHHHHHHHHHHHHHHHHTTCHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHhcCCC-------CHHHHHHHHHHHHHHHHhcCHHHHHHHHH
Confidence 45567777788888888899999999999999998765432221 34568889999999999999999999999
Q ss_pred HHHhc
Q 011164 473 KVQQQ 477 (492)
Q Consensus 473 ~al~~ 477 (492)
++|++
T Consensus 376 ~aL~i 380 (490)
T 3n71_A 376 RMVDG 380 (490)
T ss_dssp HHHHH
T ss_pred HHHHH
Confidence 99976
No 207
>1xnf_A Lipoprotein NLPI; TPR, tetratricopeptide, structural genomi unknown function; 1.98A {Escherichia coli} SCOP: a.118.8.1
Probab=97.10 E-value=0.0007 Score=62.89 Aligned_cols=68 Identities=15% Similarity=-0.007 Sum_probs=59.5
Q ss_pred HHHHHhhhHHHHcccHHHHHHHHHHHHHHhcccCCCChHHHHHHHHHHHHhHhHHHHHHHHhcCHHHHHHHHHHHHhcCC
Q 011164 400 GKKKEQGNTLFKAGKYARASKRYEKAVKYIEYDTSFGDEEKKQAKALKVACNLNNAACKLKLKDYKQAEKLCTKVQQQKK 479 (492)
Q Consensus 400 ~~~K~~Gn~~fk~~~~~~A~~~Y~~al~~l~~~~~~~~~~~~~~~~~~~~l~~N~a~~~lk~~~~~~ai~~~~~al~~dp 479 (492)
..+...|..+++.|+|.+|+..|+++++.... ...++.++|.|++++++|++|+..+.++++++|
T Consensus 78 ~~~~~la~~~~~~~~~~~A~~~~~~al~~~~~---------------~~~~~~~la~~~~~~g~~~~A~~~~~~a~~~~~ 142 (275)
T 1xnf_A 78 EVFNYLGIYLTQAGNFDAAYEAFDSVLELDPT---------------YNYAHLNRGIALYYGGRDKLAQDDLLAFYQDDP 142 (275)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTT---------------CTHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCT
T ss_pred HHHHHHHHHHHHccCHHHHHHHHHHHHhcCcc---------------ccHHHHHHHHHHHHhccHHHHHHHHHHHHHhCC
Confidence 34567888999999999999999999987321 257889999999999999999999999999999
Q ss_pred CCc
Q 011164 480 FLL 482 (492)
Q Consensus 480 ~n~ 482 (492)
++.
T Consensus 143 ~~~ 145 (275)
T 1xnf_A 143 NDP 145 (275)
T ss_dssp TCH
T ss_pred CCh
Confidence 886
No 208
>3cv0_A Peroxisome targeting signal 1 receptor PEX5; TPR motifs, TPR protein, peroxin 5, PEX5, PTS1 binding domain, protein-peptide complex, receptor; 2.00A {Trypanosoma brucei} PDB: 3cvl_A 3cvn_A 3cvp_A 3cvq_A
Probab=97.05 E-value=0.00044 Score=65.96 Aligned_cols=87 Identities=10% Similarity=-0.045 Sum_probs=46.5
Q ss_pred HHHHHhhhHHHHcccHHHHHHHHHHHHHHhcccC-------------CCChHHHH------HHHHHHHHhHhHHHHHHHH
Q 011164 400 GKKKEQGNTLFKAGKYARASKRYEKAVKYIEYDT-------------SFGDEEKK------QAKALKVACNLNNAACKLK 460 (492)
Q Consensus 400 ~~~K~~Gn~~fk~~~~~~A~~~Y~~al~~l~~~~-------------~~~~~~~~------~~~~~~~~l~~N~a~~~lk 460 (492)
..+...|..+++.|+|.+|+..|+++++...... ...++... ...+....++.++|.++.+
T Consensus 22 ~~~~~~a~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~la~~~~~ 101 (327)
T 3cv0_A 22 ENPMEEGLSMLKLANLAEAALAFEAVCQAAPEREEAWRSLGLTQAENEKDGLAIIALNHARMLDPKDIAVHAALAVSHTN 101 (327)
T ss_dssp SCHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhccHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHhcCcCCHHHHHHHHHHHHH
Confidence 3455677777788888888888888776522100 00000000 0011123455666666666
Q ss_pred hcCHHHHHHHHHHHHhcCCCCcccee
Q 011164 461 LKDYKQAEKLCTKVQQQKKFLLLPIF 486 (492)
Q Consensus 461 ~~~~~~ai~~~~~al~~dp~n~KA~~ 486 (492)
+++|++|+..+.++++.+|++..++.
T Consensus 102 ~~~~~~A~~~~~~~~~~~~~~~~~~~ 127 (327)
T 3cv0_A 102 EHNANAALASLRAWLLSQPQYEQLGS 127 (327)
T ss_dssp TTCHHHHHHHHHHHHHTSTTTTTC--
T ss_pred cCCHHHHHHHHHHHHHhCCccHHHHH
Confidence 66666666666666666666555443
No 209
>3edt_B KLC 2, kinesin light chain 2; superhelical, structural genomics, structural genomics conso SGC, microtubule, motor protein, phosphoprotein; 2.70A {Homo sapiens} PDB: 3ceq_A
Probab=97.04 E-value=0.00053 Score=63.71 Aligned_cols=73 Identities=22% Similarity=0.122 Sum_probs=60.6
Q ss_pred HHHHHHHhhhHHHHcccHHHHHHHHHHHHHHhcccCCCChHHHHHHHHHHHHhHhHHHHHHHHhcCHHHHHHHHHHHHhc
Q 011164 398 AAGKKKEQGNTLFKAGKYARASKRYEKAVKYIEYDTSFGDEEKKQAKALKVACNLNNAACKLKLKDYKQAEKLCTKVQQQ 477 (492)
Q Consensus 398 ~a~~~K~~Gn~~fk~~~~~~A~~~Y~~al~~l~~~~~~~~~~~~~~~~~~~~l~~N~a~~~lk~~~~~~ai~~~~~al~~ 477 (492)
.+..+...|..++..|+|.+|+..|+++++........+ .+....++.|+|.|+..+++|++|+..+.+++++
T Consensus 42 ~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~~~~~~~-------~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~ 114 (283)
T 3edt_B 42 VATMLNILALVYRDQNKYKEAAHLLNDALAIREKTLGKD-------HPAVAATLNNLAVLYGKRGKYKEAEPLCKRALEI 114 (283)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHTCTT-------CHHHHHHHHHHHHHHHTTTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHcCCc-------chHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHH
Confidence 455677899999999999999999999998753221100 2456789999999999999999999999999988
No 210
>2kat_A Uncharacterized protein; NESG, structure, structural genomics, PSI-2, protein structure initiative; NMR {Bordetella parapertussis}
Probab=97.04 E-value=0.00014 Score=58.57 Aligned_cols=58 Identities=5% Similarity=-0.102 Sum_probs=49.0
Q ss_pred HHHHHHHHHHHHhcccCCCChHHHHHHHHHHHHhHhHHHHHHHHhcCHHHHHHHHHHHHhcCCCCccceeeee
Q 011164 417 RASKRYEKAVKYIEYDTSFGDEEKKQAKALKVACNLNNAACKLKLKDYKQAEKLCTKVQQQKKFLLLPIFNIY 489 (492)
Q Consensus 417 ~A~~~Y~~al~~l~~~~~~~~~~~~~~~~~~~~l~~N~a~~~lk~~~~~~ai~~~~~al~~dp~n~KA~~r~~ 489 (492)
.|+..|+++++.-. ....++.|+|.+++++++|++|+..+.++++++|++..+++++.
T Consensus 3 ~a~~~~~~al~~~p---------------~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~la 60 (115)
T 2kat_A 3 AITERLEAMLAQGT---------------DNMLLRFTLGKTYAEHEQFDAALPHLRAALDFDPTYSVAWKWLG 60 (115)
T ss_dssp CHHHHHHHHHTTTC---------------CCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHH
T ss_pred HHHHHHHHHHHhCC---------------CcHHHHHHHHHHHHHccCHHHHHHHHHHHHHHCCCcHHHHHHHH
Confidence 57888999987522 12568999999999999999999999999999999988877653
No 211
>3edt_B KLC 2, kinesin light chain 2; superhelical, structural genomics, structural genomics conso SGC, microtubule, motor protein, phosphoprotein; 2.70A {Homo sapiens} PDB: 3ceq_A
Probab=97.03 E-value=0.00041 Score=64.46 Aligned_cols=74 Identities=15% Similarity=-0.035 Sum_probs=60.8
Q ss_pred HHHHHHHHhhhHHHHcccHHHHHHHHHHHHHHhcccCCCChHHHHHHHHHHHHhHhHHHHHHHHhcCHHHHHHHHHHHHh
Q 011164 397 EAAGKKKEQGNTLFKAGKYARASKRYEKAVKYIEYDTSFGDEEKKQAKALKVACNLNNAACKLKLKDYKQAEKLCTKVQQ 476 (492)
Q Consensus 397 ~~a~~~K~~Gn~~fk~~~~~~A~~~Y~~al~~l~~~~~~~~~~~~~~~~~~~~l~~N~a~~~lk~~~~~~ai~~~~~al~ 476 (492)
..+..+...|+.++..|+|.+|+..|+++++........+ .+....++.|+|.++.++++|++|+..+.++++
T Consensus 83 ~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~~~~~~~-------~~~~~~~~~~la~~~~~~g~~~~A~~~~~~al~ 155 (283)
T 3edt_B 83 AVAATLNNLAVLYGKRGKYKEAEPLCKRALEIREKVLGKF-------HPDVAKQLNNLALLCQNQGKAEEVEYYYRRALE 155 (283)
T ss_dssp HHHHHHHHHHHHHHTTTCHHHHHHHHHHHHHHHHHHHCTT-------CHHHHHHHHHHHHHHHTTTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHcCCC-------ChHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHH
Confidence 3455677889999999999999999999998753221110 245678899999999999999999999999999
Q ss_pred c
Q 011164 477 Q 477 (492)
Q Consensus 477 ~ 477 (492)
+
T Consensus 156 ~ 156 (283)
T 3edt_B 156 I 156 (283)
T ss_dssp H
T ss_pred H
Confidence 8
No 212
>2yhc_A BAMD, UPF0169 lipoprotein YFIO; essential BAM component, membrane protein; 1.80A {Escherichia coli} PDB: 3tgo_A 3q5m_A
Probab=97.02 E-value=0.0025 Score=57.98 Aligned_cols=69 Identities=12% Similarity=0.018 Sum_probs=58.6
Q ss_pred HHhhhHHHHcccHHHHHHHHHHHHHHhcccCCCChHHHHHHHHHHHHhHhHHHHHHHHhcCHHHHHHHHHHHHhcCCCCc
Q 011164 403 KEQGNTLFKAGKYARASKRYEKAVKYIEYDTSFGDEEKKQAKALKVACNLNNAACKLKLKDYKQAEKLCTKVQQQKKFLL 482 (492)
Q Consensus 403 K~~Gn~~fk~~~~~~A~~~Y~~al~~l~~~~~~~~~~~~~~~~~~~~l~~N~a~~~lk~~~~~~ai~~~~~al~~dp~n~ 482 (492)
...|..++++|+|.+|+..|+++++.... .+....++.+++.|+.++|++++|+....+++...|++.
T Consensus 151 ~~~a~~~~~~~~~~~A~~~~~~~l~~~p~------------~~~~~~a~~~l~~~~~~~g~~~~A~~~~~~l~~~~~~~~ 218 (225)
T 2yhc_A 151 YSVAEYYTERGAWVAVVNRVEGMLRDYPD------------TQATRDALPLMENAYRQMQMNAQAEKVAKIIAANSSNTL 218 (225)
T ss_dssp HHHHHHHHHHTCHHHHHHHHHHHHHHSTT------------SHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHCCSCCC
T ss_pred HHHHHHHHHcCcHHHHHHHHHHHHHHCcC------------CCccHHHHHHHHHHHHHcCCcHHHHHHHHHHHhhCCCch
Confidence 56788899999999999999999987432 223456889999999999999999999999999888765
Q ss_pred c
Q 011164 483 L 483 (492)
Q Consensus 483 K 483 (492)
.
T Consensus 219 ~ 219 (225)
T 2yhc_A 219 E 219 (225)
T ss_dssp C
T ss_pred h
Confidence 3
No 213
>2vq2_A PILW, putative fimbrial biogenesis and twitching motility protein; secretin, TPR repeat, type IV pilus, bacterail virulence; 1.54A {Neisseria meningitidis}
Probab=96.98 E-value=0.00086 Score=60.01 Aligned_cols=67 Identities=13% Similarity=0.072 Sum_probs=39.0
Q ss_pred HhhhHHHHcccHHHHHHHHHHHHHHhcccCCCChHHHHHHHHHHHHhHhHHHHHHHHhcCHHHHHHHHHHHHhcCC-CCc
Q 011164 404 EQGNTLFKAGKYARASKRYEKAVKYIEYDTSFGDEEKKQAKALKVACNLNNAACKLKLKDYKQAEKLCTKVQQQKK-FLL 482 (492)
Q Consensus 404 ~~Gn~~fk~~~~~~A~~~Y~~al~~l~~~~~~~~~~~~~~~~~~~~l~~N~a~~~lk~~~~~~ai~~~~~al~~dp-~n~ 482 (492)
..|..+++.|++.+|+..|+++++... ....++.++|.+++++++|++|+..++++++++| .+.
T Consensus 118 ~l~~~~~~~~~~~~A~~~~~~~~~~~~---------------~~~~~~~~la~~~~~~~~~~~A~~~~~~~~~~~~~~~~ 182 (225)
T 2vq2_A 118 NKGICSAKQGQFGLAEAYLKRSLAAQP---------------QFPPAFKELARTKMLAGQLGDADYYFKKYQSRVEVLQA 182 (225)
T ss_dssp HHHHHHHHTTCHHHHHHHHHHHHHHST---------------TCHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHCSCCH
T ss_pred HHHHHHHHcCCHHHHHHHHHHHHHhCC---------------CCchHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCCH
Confidence 344444455555555555555554311 1244566777777777777777777777777777 665
Q ss_pred cce
Q 011164 483 LPI 485 (492)
Q Consensus 483 KA~ 485 (492)
.++
T Consensus 183 ~~~ 185 (225)
T 2vq2_A 183 DDL 185 (225)
T ss_dssp HHH
T ss_pred HHH
Confidence 544
No 214
>2ho1_A Type 4 fimbrial biogenesis protein PILF; type IV pilus biogenesis, TPR, superhelix, protein binding; HET: MSE; 2.00A {Pseudomonas aeruginosa} PDB: 2fi7_A
Probab=96.98 E-value=0.00064 Score=62.51 Aligned_cols=71 Identities=17% Similarity=0.119 Sum_probs=37.2
Q ss_pred HHHhhhHHHHcccHHHHHHHHHHHHHHhcccCCCChHHHHHHHHHHHHhHhHHHHHHHHhcCHHHHHHHHHHHHhcCCCC
Q 011164 402 KKEQGNTLFKAGKYARASKRYEKAVKYIEYDTSFGDEEKKQAKALKVACNLNNAACKLKLKDYKQAEKLCTKVQQQKKFL 481 (492)
Q Consensus 402 ~K~~Gn~~fk~~~~~~A~~~Y~~al~~l~~~~~~~~~~~~~~~~~~~~l~~N~a~~~lk~~~~~~ai~~~~~al~~dp~n 481 (492)
+...|..+++.|+|.+|+..|++++. ... .+....++.++|.++++++++++|+..+.++++++|.+
T Consensus 108 ~~~la~~~~~~g~~~~A~~~~~~~~~-~~~------------~~~~~~~~~~la~~~~~~g~~~~A~~~~~~~~~~~~~~ 174 (252)
T 2ho1_A 108 LNNYGGFLYEQKRYEEAYQRLLEASQ-DTL------------YPERSRVFENLGLVSLQMKKPAQAKEYFEKSLRLNRNQ 174 (252)
T ss_dssp HHHHHHHHHHTTCHHHHHHHHHHHTT-CTT------------CTTHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCSCC
T ss_pred HHHHHHHHHHHhHHHHHHHHHHHHHh-Ccc------------CcccHHHHHHHHHHHHHcCCHHHHHHHHHHHHhcCccc
Confidence 34556666777777777777777765 000 01123344445555555555555555555555555444
Q ss_pred ccce
Q 011164 482 LLPI 485 (492)
Q Consensus 482 ~KA~ 485 (492)
..++
T Consensus 175 ~~~~ 178 (252)
T 2ho1_A 175 PSVA 178 (252)
T ss_dssp HHHH
T ss_pred HHHH
Confidence 4333
No 215
>1w3b_A UDP-N-acetylglucosamine--peptide N-acetylglucosaminyltransferase 110; OGT, glcnac, nucleoporin, O-linked glycosylation, TPR repeat, protein binding; 2.85A {Homo sapiens} SCOP: a.118.8.1
Probab=96.98 E-value=0.00036 Score=69.06 Aligned_cols=89 Identities=15% Similarity=0.015 Sum_probs=56.6
Q ss_pred HHHHhhhHHHHcccHHHHHHHHHHHHHHhcccC-------------CCChHHHHHH------HHHHHHhHhHHHHHHHHh
Q 011164 401 KKKEQGNTLFKAGKYARASKRYEKAVKYIEYDT-------------SFGDEEKKQA------KALKVACNLNNAACKLKL 461 (492)
Q Consensus 401 ~~K~~Gn~~fk~~~~~~A~~~Y~~al~~l~~~~-------------~~~~~~~~~~------~~~~~~l~~N~a~~~lk~ 461 (492)
.+...|..+.+.|++.+|+..|+++++...... ...++....+ .+....++.|++.++.++
T Consensus 273 ~~~~l~~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~l~~~~~~~ 352 (388)
T 1w3b_A 273 AYCNLANALKEKGSVAEAEDCYNTALRLCPTHADSLNNLANIKREQGNIEEAVRLYRKALEVFPEFAAAHSNLASVLQQQ 352 (388)
T ss_dssp HHHHHHHHHHHHSCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHTTTCHHHHHHHHHHHTTSCTTCHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHHcCCHHHHHHHHHHHHhhCcccHHHHHHHHHHHHHcCCHHHHHHHHHHHHhcCCCcHHHHHHHHHHHHHc
Confidence 345566666677777777777777766422100 0000000001 112245788899999999
Q ss_pred cCHHHHHHHHHHHHhcCCCCccceeeee
Q 011164 462 KDYKQAEKLCTKVQQQKKFLLLPIFNIY 489 (492)
Q Consensus 462 ~~~~~ai~~~~~al~~dp~n~KA~~r~~ 489 (492)
|++++|+..++++++++|++..++++..
T Consensus 353 g~~~~A~~~~~~a~~~~p~~~~a~~~lg 380 (388)
T 1w3b_A 353 GKLQEALMHYKEAIRISPTFADAYSNMG 380 (388)
T ss_dssp TCCHHHHHHHHHHHTTCTTCHHHHHHHH
T ss_pred CCHHHHHHHHHHHHhhCCCCHHHHHhHH
Confidence 9999999999999999998888877643
No 216
>3gw4_A Uncharacterized protein; structural genomics, PSI-2, protein structure initiative, no structural genomics consortium, NESG, DRR162B; 2.49A {Deinococcus radiodurans R1}
Probab=96.97 E-value=0.0037 Score=55.03 Aligned_cols=71 Identities=7% Similarity=0.065 Sum_probs=61.1
Q ss_pred HHHHHHHhhhHHHHcccHHHHHHHHHHHHHHhcccCCCChHHHHHHHHHHHHhHhHHHHHHHHhcCHHHHHHHHHHHHhc
Q 011164 398 AAGKKKEQGNTLFKAGKYARASKRYEKAVKYIEYDTSFGDEEKKQAKALKVACNLNNAACKLKLKDYKQAEKLCTKVQQQ 477 (492)
Q Consensus 398 ~a~~~K~~Gn~~fk~~~~~~A~~~Y~~al~~l~~~~~~~~~~~~~~~~~~~~l~~N~a~~~lk~~~~~~ai~~~~~al~~ 477 (492)
.+..+...|..++..|+|.+|+..|++++........ ......++.|+|.++..+++|++|+..+.+++++
T Consensus 25 ~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~~~~~---------~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~ 95 (203)
T 3gw4_A 25 ASGARFMLGYVYAFMDRFDEARASFQALQQQAQKSGD---------HTAEHRALHQVGMVERMAGNWDAARRCFLEEREL 95 (203)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHTTCC---------HHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHcCC---------cHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHH
Confidence 3556778899999999999999999999997654321 4456788999999999999999999999999988
No 217
>3n71_A Histone lysine methyltransferase SMYD1; heart development, transcription; HET: SFG MES; 2.30A {Mus musculus}
Probab=96.94 E-value=0.0022 Score=66.09 Aligned_cols=74 Identities=9% Similarity=-0.084 Sum_probs=62.1
Q ss_pred HHHHHHHHhhhHHHHcccHHHHHHHHHHHHHHhcccCCCChHHHHHHHHHHHHhHhHHHHHHHHhcCHHHHHHHHHHHHh
Q 011164 397 EAAGKKKEQGNTLFKAGKYARASKRYEKAVKYIEYDTSFGDEEKKQAKALKVACNLNNAACKLKLKDYKQAEKLCTKVQQ 476 (492)
Q Consensus 397 ~~a~~~K~~Gn~~fk~~~~~~A~~~Y~~al~~l~~~~~~~~~~~~~~~~~~~~l~~N~a~~~lk~~~~~~ai~~~~~al~ 476 (492)
..+..+-..|..+..+|+|.+|+..|+++|.......... .+.....++|+|..|..+|+|++|+..+.+||+
T Consensus 349 ~~a~~~~nLa~~y~~~g~~~eA~~~~~~aL~i~~~~lG~~-------Hp~~a~~l~nLa~~~~~~G~~~eA~~~~~~Al~ 421 (490)
T 3n71_A 349 YVLRLLSIASEVLSYLQAYEEASHYARRMVDGYMKLYHHN-------NAQLGMAVMRAGLTNWHAGHIEVGHGMICKAYA 421 (490)
T ss_dssp HHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHSCTT-------CHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHcCCC-------CHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHH
Confidence 4666777888899999999999999999998865432222 445688899999999999999999999999997
Q ss_pred c
Q 011164 477 Q 477 (492)
Q Consensus 477 ~ 477 (492)
+
T Consensus 422 i 422 (490)
T 3n71_A 422 I 422 (490)
T ss_dssp H
T ss_pred H
Confidence 6
No 218
>3u3w_A Transcriptional activator PLCR protein; ternary complex, PLCR-PAPR7-DNA, HTH DNA-binding domain, QUO sensing; 2.40A {Bacillus thuringiensis} PDB: 2qfc_A
Probab=96.90 E-value=0.0021 Score=61.12 Aligned_cols=73 Identities=16% Similarity=0.100 Sum_probs=60.1
Q ss_pred HHHHHHHHhhhHHHHcccHHHHHHHHHHHHHHhcccCCCChHHHHHHHHHHHHhHhHHHHHHHHhcC-HHHHHHHHHHHH
Q 011164 397 EAAGKKKEQGNTLFKAGKYARASKRYEKAVKYIEYDTSFGDEEKKQAKALKVACNLNNAACKLKLKD-YKQAEKLCTKVQ 475 (492)
Q Consensus 397 ~~a~~~K~~Gn~~fk~~~~~~A~~~Y~~al~~l~~~~~~~~~~~~~~~~~~~~l~~N~a~~~lk~~~-~~~ai~~~~~al 475 (492)
..+..+...|..+++.|+|.+|+..|++|+.+...... ......+|.|+|.|+.++|+ |++|+.++.+|+
T Consensus 194 ~~~~~~~nlg~~y~~~~~y~~A~~~~~~al~~~~~~~~---------~~~~~~~~~~lg~~~~~~g~~~~~A~~~~~~Al 264 (293)
T 3u3w_A 194 FDVKVRYNHAKALYLDSRYEESLYQVNKAIEISCRINS---------MALIGQLYYQRGECLRKLEYEEAEIEDAYKKAS 264 (293)
T ss_dssp HHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTB---------CTTHHHHHHHHHHHHHHTTCCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHcCc---------HHHHHHHHHHHHHHHHHhCCcHHHHHHHHHHHH
Confidence 44557788999999999999999999999987543211 12347899999999999995 799999999999
Q ss_pred hcC
Q 011164 476 QQK 478 (492)
Q Consensus 476 ~~d 478 (492)
.+-
T Consensus 265 ~i~ 267 (293)
T 3u3w_A 265 FFF 267 (293)
T ss_dssp HHH
T ss_pred HHH
Confidence 773
No 219
>3cv0_A Peroxisome targeting signal 1 receptor PEX5; TPR motifs, TPR protein, peroxin 5, PEX5, PTS1 binding domain, protein-peptide complex, receptor; 2.00A {Trypanosoma brucei} PDB: 3cvl_A 3cvn_A 3cvp_A 3cvq_A
Probab=96.89 E-value=0.00088 Score=63.82 Aligned_cols=73 Identities=11% Similarity=0.005 Sum_probs=53.3
Q ss_pred HHHHHhhhHHHHcccHHHHHHHHHHHHHHhcccCCCChHHHHHHHHHHHHhHhHHHHHHHHhcCHHHHHHHHHHHHhcCC
Q 011164 400 GKKKEQGNTLFKAGKYARASKRYEKAVKYIEYDTSFGDEEKKQAKALKVACNLNNAACKLKLKDYKQAEKLCTKVQQQKK 479 (492)
Q Consensus 400 ~~~K~~Gn~~fk~~~~~~A~~~Y~~al~~l~~~~~~~~~~~~~~~~~~~~l~~N~a~~~lk~~~~~~ai~~~~~al~~dp 479 (492)
..+...|..+++.|++.+|+..|+++++.... ...++.++|.++.++++|++|+..+.++++++|
T Consensus 173 ~~~~~la~~~~~~~~~~~A~~~~~~~~~~~~~---------------~~~~~~~l~~~~~~~~~~~~A~~~~~~a~~~~~ 237 (327)
T 3cv0_A 173 QLHASLGVLYNLSNNYDSAAANLRRAVELRPD---------------DAQLWNKLGATLANGNRPQEALDAYNRALDINP 237 (327)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTT---------------CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCT
T ss_pred HHHHHHHHHHHHhccHHHHHHHHHHHHHhCCC---------------cHHHHHHHHHHHHHcCCHHHHHHHHHHHHHcCC
Confidence 34566788888999999999999999976321 134567777777777777777777777777777
Q ss_pred CCccceee
Q 011164 480 FLLLPIFN 487 (492)
Q Consensus 480 ~n~KA~~r 487 (492)
++..+++.
T Consensus 238 ~~~~~~~~ 245 (327)
T 3cv0_A 238 GYVRVMYN 245 (327)
T ss_dssp TCHHHHHH
T ss_pred CCHHHHHH
Confidence 76665544
No 220
>4g1t_A Interferon-induced protein with tetratricopeptide 2; ISG, all alpha helix, antivirus, antiviral protein; 2.80A {Homo sapiens}
Probab=96.87 E-value=0.00045 Score=70.16 Aligned_cols=74 Identities=15% Similarity=0.005 Sum_probs=58.2
Q ss_pred HHHHhhhHHHHcccHHHHHHHHHHHHHHhcccCCCChHHHHHHHHHHHHhHhHHHHHHHHhcCHHHHHHHHHHHHhcCCC
Q 011164 401 KKKEQGNTLFKAGKYARASKRYEKAVKYIEYDTSFGDEEKKQAKALKVACNLNNAACKLKLKDYKQAEKLCTKVQQQKKF 480 (492)
Q Consensus 401 ~~K~~Gn~~fk~~~~~~A~~~Y~~al~~l~~~~~~~~~~~~~~~~~~~~l~~N~a~~~lk~~~~~~ai~~~~~al~~dp~ 480 (492)
.+...|..++.+|+|++|+..|++|++++...... .........|.|+|.+|..+|+|++|+.++++++++.+.
T Consensus 53 ~yn~Lg~~~~~~G~~~eAl~~~~kAl~~~~~~~~~------~~~~~~~~~~~nla~~y~~~g~~~~A~~~~~ka~~i~~~ 126 (472)
T 4g1t_A 53 MCNLLAYLKHLKGQNEAALECLRKAEELIQQEHAD------QAEIRSLVTWGNYAWVYYHMGRLSDVQIYVDKVKHVCEK 126 (472)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHSGG------GCTTTTHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHCCCHHHHHHHHHHHHHHHHhcCcc------ccchHHHHHHHHHHHHHHHcCChHHHHHHHHHHHHHhHh
Confidence 34567888999999999999999999986432110 001223668999999999999999999999999988653
No 221
>3qwp_A SET and MYND domain-containing protein 3; SMYD3,SET and MYND domain, zinc finger MYND domain-containin 1, structural genomics; HET: SAM; 1.53A {Homo sapiens} PDB: 3mek_A* 3oxg_A* 3oxf_A* 3pdn_A* 3oxl_A* 3ru0_A*
Probab=96.86 E-value=0.0027 Score=64.31 Aligned_cols=76 Identities=9% Similarity=-0.098 Sum_probs=63.8
Q ss_pred HHHHHHHHHHhhhHHHHcccHHHHHHHHHHHHHHhcccCCCChHHHHHHHHHHHHhHhHHHHHHHHhcCHHHHHHHHHHH
Q 011164 395 KIEAAGKKKEQGNTLFKAGKYARASKRYEKAVKYIEYDTSFGDEEKKQAKALKVACNLNNAACKLKLKDYKQAEKLCTKV 474 (492)
Q Consensus 395 ~l~~a~~~K~~Gn~~fk~~~~~~A~~~Y~~al~~l~~~~~~~~~~~~~~~~~~~~l~~N~a~~~lk~~~~~~ai~~~~~a 474 (492)
....+..+-..|..+..+|+|.+|+..|+++|.......... .+.....++|+|..|..+|+|++|+..+.+|
T Consensus 325 h~~~~~~~~~L~~~y~~~g~~~eA~~~~~~~L~i~~~~lg~~-------Hp~~a~~l~nLa~~~~~~g~~~eA~~~~~~A 397 (429)
T 3qwp_A 325 NIYQLKVLDCAMDACINLGLLEEALFYGTRTMEPYRIFFPGS-------HPVRGVQVMKVGKLQLHQGMFPQAMKNLRLA 397 (429)
T ss_dssp SHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHHSCSS-------CHHHHHHHHHHHHHHHHTTCHHHHHHHHHHH
T ss_pred chHHHHHHHHHHHHHHhhccHHHHHHHHHHHHHhHHHHcCCC-------ChHHHHHHHHHHHHHHhcCCHHHHHHHHHHH
Confidence 345677778889999999999999999999998865432222 4556888999999999999999999999999
Q ss_pred Hhc
Q 011164 475 QQQ 477 (492)
Q Consensus 475 l~~ 477 (492)
|++
T Consensus 398 l~i 400 (429)
T 3qwp_A 398 FDI 400 (429)
T ss_dssp HHH
T ss_pred HHH
Confidence 976
No 222
>4a1s_A PINS, partner of inscuteable; cell cycle, LGN, mitotic spindle orientation, asymmetric CEL divisions; 2.10A {Drosophila melanogaster}
Probab=96.86 E-value=0.001 Score=66.01 Aligned_cols=33 Identities=15% Similarity=0.180 Sum_probs=29.0
Q ss_pred HHHHHHHHHhhhHHHHcccHHHHHHHHHHHHHH
Q 011164 396 IEAAGKKKEQGNTLFKAGKYARASKRYEKAVKY 428 (492)
Q Consensus 396 l~~a~~~K~~Gn~~fk~~~~~~A~~~Y~~al~~ 428 (492)
...+..+...|..++..|+|.+|+..|+++++.
T Consensus 45 ~~~~~~l~~~g~~~~~~g~~~~A~~~~~~al~~ 77 (411)
T 4a1s_A 45 SSMCLELALEGERLCNAGDCRAGVAFFQAAIQA 77 (411)
T ss_dssp HHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH
T ss_pred hHHHHHHHHHHHHHHHhCcHHHHHHHHHHHHHh
Confidence 456777888999999999999999999999986
No 223
>3ulq_A Response regulator aspartate phosphatase F; tetratricopeptide repeat, response regulator helix-turn-HELX binding, 3-helix bundle; 2.30A {Bacillus subtilis}
Probab=96.85 E-value=0.003 Score=62.42 Aligned_cols=77 Identities=14% Similarity=0.028 Sum_probs=59.3
Q ss_pred HHHHHHHHhhhHHHHcccHHHHHHHHHHHHHHhcccCCCChHHHHHHHHHHHHhHhHHHHHHHHhcCHHHHHHHHHHHHh
Q 011164 397 EAAGKKKEQGNTLFKAGKYARASKRYEKAVKYIEYDTSFGDEEKKQAKALKVACNLNNAACKLKLKDYKQAEKLCTKVQQ 476 (492)
Q Consensus 397 ~~a~~~K~~Gn~~fk~~~~~~A~~~Y~~al~~l~~~~~~~~~~~~~~~~~~~~l~~N~a~~~lk~~~~~~ai~~~~~al~ 476 (492)
..+..+...|..++..|+|.+|+..|++|+++...... .......+++|+|.|+..+++|++|+.++.+|++
T Consensus 141 ~~a~~~~~lg~~~~~~~~~~~A~~~~~~al~~~~~~~~--------~~~~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~ 212 (383)
T 3ulq_A 141 EKAEFFFKMSESYYYMKQTYFSMDYARQAYEIYKEHEA--------YNIRLLQCHSLFATNFLDLKQYEDAISHFQKAYS 212 (383)
T ss_dssp HHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHTCST--------THHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHhCcc--------chHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHH
Confidence 34556667777777888888888888888877654321 1334578999999999999999999999999999
Q ss_pred cCCCC
Q 011164 477 QKKFL 481 (492)
Q Consensus 477 ~dp~n 481 (492)
+.+.+
T Consensus 213 ~~~~~ 217 (383)
T 3ulq_A 213 MAEAE 217 (383)
T ss_dssp HHHHT
T ss_pred HHHHc
Confidence 86543
No 224
>3qww_A SET and MYND domain-containing protein 2; methyltransferase, HSP90, transferase-transferase inhibitor; HET: SFG; 1.80A {Mus musculus} PDB: 3qwv_A* 3s7d_A* 3s7b_A* 3s7f_A* 3s7j_A* 3tg4_A* 3tg5_A* 3rib_A*
Probab=96.83 E-value=0.0038 Score=63.27 Aligned_cols=77 Identities=10% Similarity=-0.015 Sum_probs=60.5
Q ss_pred HHHHHHHHHHHhhhHHHHcccHHHHHHHHHHHHHHhcccCCCChHHHHHHHHHHHHhHhHHHHHHHHhcCHHHHHHHHHH
Q 011164 394 EKIEAAGKKKEQGNTLFKAGKYARASKRYEKAVKYIEYDTSFGDEEKKQAKALKVACNLNNAACKLKLKDYKQAEKLCTK 473 (492)
Q Consensus 394 e~l~~a~~~K~~Gn~~fk~~~~~~A~~~Y~~al~~l~~~~~~~~~~~~~~~~~~~~l~~N~a~~~lk~~~~~~ai~~~~~ 473 (492)
+.+..+....+.+...-+.|+|.+|+..|+++|...+...... .......++|+|.+|..+|+|++|+..+.+
T Consensus 293 ~~~~~~~~~le~~~~~~~~g~~~eA~~~~~~~L~i~~~~lg~~-------Hp~~a~~~~nLa~~y~~~g~~~eA~~~~~~ 365 (433)
T 3qww_A 293 DMVRYARNVIEEFRRAKHYKSPSELLEICELSQEKMSSVFEDS-------NVYMLHMMYQAMGVCLYMQDWEGALKYGQK 365 (433)
T ss_dssp HHHHHHHHHHHHHHHHTTTSCHHHHHHHHHHHHHHHTTTBCTT-------SHHHHHHHHHHHHHHHHTTCHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHhhhccCHHHHHHHHHHHHHHhhCccChh-------chHHHHHHHHHHHHHHhhcCHHHHHHHHHH
Confidence 3444555666666666677899999999999998765432221 445678899999999999999999999999
Q ss_pred HHhc
Q 011164 474 VQQQ 477 (492)
Q Consensus 474 al~~ 477 (492)
+|++
T Consensus 366 aL~i 369 (433)
T 3qww_A 366 IIKP 369 (433)
T ss_dssp HHHH
T ss_pred HHHH
Confidence 9976
No 225
>3qou_A Protein YBBN; thioredoxin-like fold, tetratricopeptide repeat, lysine dimethylation, protein binding; HET: MLY; 1.80A {Escherichia coli} PDB: 3qdn_A*
Probab=96.80 E-value=0.00039 Score=66.34 Aligned_cols=67 Identities=16% Similarity=0.092 Sum_probs=51.0
Q ss_pred HHHHHHhhhHHHHcccHHHHHHHHHHHHHHhcccCCCChHHHHHHHHHHHHhHhHHHHHHHHhcCHHHHHHHHHHHHhcC
Q 011164 399 AGKKKEQGNTLFKAGKYARASKRYEKAVKYIEYDTSFGDEEKKQAKALKVACNLNNAACKLKLKDYKQAEKLCTKVQQQK 478 (492)
Q Consensus 399 a~~~K~~Gn~~fk~~~~~~A~~~Y~~al~~l~~~~~~~~~~~~~~~~~~~~l~~N~a~~~lk~~~~~~ai~~~~~al~~d 478 (492)
...+...|..++++|++.+|+..|++++..-. -...++.|+|.+++++|++++|+..+.+++..+
T Consensus 117 ~~~~~~~a~~~~~~g~~~~A~~~~~~al~~~P---------------~~~~a~~~la~~~~~~g~~~~A~~~l~~~~~~~ 181 (287)
T 3qou_A 117 EELXAQQAMQLMQESNYTDALPLLXDAWQLSN---------------QNGEIGLLLAETLIALNRSEDAEAVLXTIPLQD 181 (287)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHTT---------------SCHHHHHHHHHHHHHTTCHHHHHHHHTTSCGGG
T ss_pred hhhHHHHHHHHHhCCCHHHHHHHHHHHHHhCC---------------cchhHHHHHHHHHHHCCCHHHHHHHHHhCchhh
Confidence 34577899999999999999999999998732 235667777777777777777776666666555
Q ss_pred CC
Q 011164 479 KF 480 (492)
Q Consensus 479 p~ 480 (492)
|+
T Consensus 182 p~ 183 (287)
T 3qou_A 182 QD 183 (287)
T ss_dssp CS
T ss_pred cc
Confidence 53
No 226
>3bee_A Putative YFRE protein; putaive YFRE protein, structural GE PSI-2, protein structure initiative; 2.15A {Vibrio parahaemolyticus rimd 2210633}
Probab=96.79 E-value=0.0028 Score=49.33 Aligned_cols=67 Identities=13% Similarity=0.020 Sum_probs=55.7
Q ss_pred HHHHHhhhHHHHccc---HHHHHHHHHHHHHHhcccCCCChHHHHHHHHHHHHhHhHHHHHHHHhcCHHHHHHHHHHHHh
Q 011164 400 GKKKEQGNTLFKAGK---YARASKRYEKAVKYIEYDTSFGDEEKKQAKALKVACNLNNAACKLKLKDYKQAEKLCTKVQQ 476 (492)
Q Consensus 400 ~~~K~~Gn~~fk~~~---~~~A~~~Y~~al~~l~~~~~~~~~~~~~~~~~~~~l~~N~a~~~lk~~~~~~ai~~~~~al~ 476 (492)
..+-..|+.+|-.++ ..+|...+++||+. ++..+..+..++..+++.++|++|+....++|+
T Consensus 7 ~~~~~~a~al~~~~~~~~~~~A~~~l~~AL~~---------------dp~~~rA~~~lg~~~~~~g~y~~Ai~~w~~~l~ 71 (93)
T 3bee_A 7 TQLAAKATTLYYLHKQAMTDEVSLLLEQALQL---------------EPYNEAALSLIANDHFISFRFQEAIDTWVLLLD 71 (93)
T ss_dssp HHHHHHHHHHHHTTTTCCCHHHHHHHHHHHHH---------------CTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHhcCCCCCHHHHHHHHHHHHH---------------CcCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHh
Confidence 345567777764444 79999999999987 444578888899999999999999999999999
Q ss_pred cCCCC
Q 011164 477 QKKFL 481 (492)
Q Consensus 477 ~dp~n 481 (492)
.+|.+
T Consensus 72 ~~p~~ 76 (93)
T 3bee_A 72 SNDPN 76 (93)
T ss_dssp CCCTT
T ss_pred hCCCC
Confidence 99973
No 227
>2xpi_A Anaphase-promoting complex subunit CUT9; cell cycle, TPR, ubiquitin ligase; 2.60A {Schizosaccharomyces pombe}
Probab=96.79 E-value=0.00094 Score=69.98 Aligned_cols=76 Identities=12% Similarity=-0.067 Sum_probs=64.7
Q ss_pred HHHHHHhhhHHHHcccHHHHHHHHHHHHHHhcccCCCChHHHHHHHHHHHHhHhHHHHHHHHhcCHHHHHHHHHHHHhcC
Q 011164 399 AGKKKEQGNTLFKAGKYARASKRYEKAVKYIEYDTSFGDEEKKQAKALKVACNLNNAACKLKLKDYKQAEKLCTKVQQQK 478 (492)
Q Consensus 399 a~~~K~~Gn~~fk~~~~~~A~~~Y~~al~~l~~~~~~~~~~~~~~~~~~~~l~~N~a~~~lk~~~~~~ai~~~~~al~~d 478 (492)
+..+...|..+++.|++++|+..|+++++.-. ....++.+++.+|.++|+|++|+..++++++++
T Consensus 516 ~~~~~~l~~~~~~~g~~~~A~~~~~~~~~~~p---------------~~~~~~~~l~~~~~~~g~~~~A~~~~~~~l~~~ 580 (597)
T 2xpi_A 516 AATWANLGHAYRKLKMYDAAIDALNQGLLLST---------------NDANVHTAIALVYLHKKIPGLAITHLHESLAIS 580 (597)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHSS---------------CCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHC
T ss_pred HHHHHHHHHHHHHhcCHHHHHHHHHHHHHhCC---------------CChHHHHHHHHHHHHhCCHHHHHHHHHHHHhcC
Confidence 34556778888999999999999999998632 125789999999999999999999999999999
Q ss_pred CCCccceeeee
Q 011164 479 KFLLLPIFNIY 489 (492)
Q Consensus 479 p~n~KA~~r~~ 489 (492)
|++..+++...
T Consensus 581 p~~~~~~~~l~ 591 (597)
T 2xpi_A 581 PNEIMASDLLK 591 (597)
T ss_dssp TTCHHHHHHHH
T ss_pred CCChHHHHHHH
Confidence 99988776543
No 228
>3gw4_A Uncharacterized protein; structural genomics, PSI-2, protein structure initiative, no structural genomics consortium, NESG, DRR162B; 2.49A {Deinococcus radiodurans R1}
Probab=96.78 E-value=0.0065 Score=53.39 Aligned_cols=72 Identities=15% Similarity=0.157 Sum_probs=58.8
Q ss_pred HHHHHHHhhhHHHHcccHHHHHHHHHHHHHHhcccCCCChHHHHHHHHHHHHhHhHHHHHHHHhcCHHHHHHHHHHHHhc
Q 011164 398 AAGKKKEQGNTLFKAGKYARASKRYEKAVKYIEYDTSFGDEEKKQAKALKVACNLNNAACKLKLKDYKQAEKLCTKVQQQ 477 (492)
Q Consensus 398 ~a~~~K~~Gn~~fk~~~~~~A~~~Y~~al~~l~~~~~~~~~~~~~~~~~~~~l~~N~a~~~lk~~~~~~ai~~~~~al~~ 477 (492)
.+..+...|..++..|+|.+|+..|++++........ ......++.|+|.++.++|+|++|+..+.+++++
T Consensus 106 ~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~~~~~~---------~~~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~ 176 (203)
T 3gw4_A 106 ASANAYEVATVALHFGDLAGARQEYEKSLVYAQQADD---------QVAIACAFRGLGDLAQQEKNLLEAQQHWLRARDI 176 (203)
T ss_dssp HHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHTTC---------HHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHhccc---------hHHHHHHHHHHHHHHHHCcCHHHHHHHHHHHHHH
Confidence 3445667788899999999999999999987543211 2345677899999999999999999999999987
Q ss_pred C
Q 011164 478 K 478 (492)
Q Consensus 478 d 478 (492)
-
T Consensus 177 ~ 177 (203)
T 3gw4_A 177 F 177 (203)
T ss_dssp H
T ss_pred H
Confidence 4
No 229
>4g1t_A Interferon-induced protein with tetratricopeptide 2; ISG, all alpha helix, antivirus, antiviral protein; 2.80A {Homo sapiens}
Probab=96.77 E-value=0.00097 Score=67.67 Aligned_cols=80 Identities=11% Similarity=-0.025 Sum_probs=60.2
Q ss_pred HHHhhhHHHHcccHHHHHHHHHHHHHHhcccCCCChHHHHHHHHHHHHhHhHHHHHHHHhc--CHHHHHHHHHHHHhcCC
Q 011164 402 KKEQGNTLFKAGKYARASKRYEKAVKYIEYDTSFGDEEKKQAKALKVACNLNNAACKLKLK--DYKQAEKLCTKVQQQKK 479 (492)
Q Consensus 402 ~K~~Gn~~fk~~~~~~A~~~Y~~al~~l~~~~~~~~~~~~~~~~~~~~l~~N~a~~~lk~~--~~~~ai~~~~~al~~dp 479 (492)
+...|..++..|+|.+|+..|++++.+........ ......+++|++.++++++ +|++|+.++.+||+++|
T Consensus 97 ~~nla~~y~~~g~~~~A~~~~~ka~~i~~~~~~~~-------~~~~~~~~~~~g~~~~~~~~~~y~~A~~~~~kal~~~p 169 (472)
T 4g1t_A 97 WGNYAWVYYHMGRLSDVQIYVDKVKHVCEKFSSPY-------RIESPELDCEEGWTRLKCGGNQNERAKVCFEKALEKKP 169 (472)
T ss_dssp HHHHHHHHHHTTCHHHHHHHHHHHHHHHHHSCCSS-------CCCCHHHHHHHHHHHHHHCTTHHHHHHHHHHHHHHHST
T ss_pred HHHHHHHHHHcCChHHHHHHHHHHHHHhHhccccc-------chhhHHHHHHHHHHHHHHccccHHHHHHHHHHHHHhCC
Confidence 44678888999999999999999998765432111 0012456788888888765 69999999999999999
Q ss_pred CCccceeee
Q 011164 480 FLLLPIFNI 488 (492)
Q Consensus 480 ~n~KA~~r~ 488 (492)
+|+.+++.+
T Consensus 170 ~~~~~~~~~ 178 (472)
T 4g1t_A 170 KNPEFTSGL 178 (472)
T ss_dssp TCHHHHHHH
T ss_pred CCHHHHHHH
Confidence 998776543
No 230
>2qfc_A PLCR protein; TPR, HTH, transcription regulation; 2.60A {Bacillus thuringiensis serovar ISRAELE35646}
Probab=96.72 E-value=0.0045 Score=58.78 Aligned_cols=70 Identities=17% Similarity=0.126 Sum_probs=56.9
Q ss_pred HHHHHhhhHHHHcccHHHHHHHHHHHHHHhcccCCCChHHHHHHHHHHHHhHhHHHHHHHHhcCHHHH-HHHHHHHHhcC
Q 011164 400 GKKKEQGNTLFKAGKYARASKRYEKAVKYIEYDTSFGDEEKKQAKALKVACNLNNAACKLKLKDYKQA-EKLCTKVQQQK 478 (492)
Q Consensus 400 ~~~K~~Gn~~fk~~~~~~A~~~Y~~al~~l~~~~~~~~~~~~~~~~~~~~l~~N~a~~~lk~~~~~~a-i~~~~~al~~d 478 (492)
..+...|..+++.|+|.+|+..|++|+........ ......+|.|+|.||.++|++++| ..++++|+.+.
T Consensus 197 ~~~~nlg~~y~~~~~y~~Al~~~~kal~~~~~~~~---------~~~~~~~~~~lg~~y~~~g~~~~Ai~~~~~~Al~~~ 267 (293)
T 2qfc_A 197 KVRYNHAKALYLDSRYEESLYQVNKAIEISCRINS---------MALIGQLYYQRGECLRKLEYEEAEIEDAYKKASFFF 267 (293)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTB---------CSSHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHH
T ss_pred HHHHhHHHHHHHHhhHHHHHHHHHHHHHHHHhcCc---------HHHHHHHHHHHHHHHHHcCCcHHHHHHHHHHHHHHH
Confidence 46678899999999999999999999987432111 113477899999999999999999 77799998763
No 231
>3q15_A PSP28, response regulator aspartate phosphatase H; tetratricopeptide repeat, 3-helix bundle, phosphorelay signa transduction, phosphatase; 2.19A {Bacillus subtilis}
Probab=96.71 E-value=0.0067 Score=59.81 Aligned_cols=74 Identities=8% Similarity=-0.007 Sum_probs=52.1
Q ss_pred HHHHHHHhhhHHHHcccHHHHHHHHHHHHHHhcccCCCChHHHHHHHHHHHHhHhHHHHHHHHhcCHHHHHHHHHHHHhc
Q 011164 398 AAGKKKEQGNTLFKAGKYARASKRYEKAVKYIEYDTSFGDEEKKQAKALKVACNLNNAACKLKLKDYKQAEKLCTKVQQQ 477 (492)
Q Consensus 398 ~a~~~K~~Gn~~fk~~~~~~A~~~Y~~al~~l~~~~~~~~~~~~~~~~~~~~l~~N~a~~~lk~~~~~~ai~~~~~al~~ 477 (492)
.+..+...|..++..|++..|+..|++|+.+....... ......+++|+|.|+..+++|++|+..+.+|+++
T Consensus 140 ~a~~~~~lg~~y~~~~~~~~A~~~~~~al~~~~~~~~~--------~~~~~~~~~~lg~~y~~~~~~~~A~~~~~~al~~ 211 (378)
T 3q15_A 140 KAEFHFKVAEAYYHMKQTHVSMYHILQALDIYQNHPLY--------SIRTIQSLFVIAGNYDDFKHYDKALPHLEAALEL 211 (378)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHTSTTC--------HHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHcCCcHHHHHHHHHHHHHHHhCCCc--------hhhHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHH
Confidence 34445555666666666666666666666654332110 2346788999999999999999999999999987
Q ss_pred CC
Q 011164 478 KK 479 (492)
Q Consensus 478 dp 479 (492)
.+
T Consensus 212 ~~ 213 (378)
T 3q15_A 212 AM 213 (378)
T ss_dssp HH
T ss_pred HH
Confidence 43
No 232
>3ma5_A Tetratricopeptide repeat domain protein; NESG, structural genomics, PSI-2, protein structure initiative; 2.80A {Salinibacter ruber} PDB: 2kcl_A 2kcv_A
Probab=96.63 E-value=0.00076 Score=53.00 Aligned_cols=43 Identities=12% Similarity=0.025 Sum_probs=39.3
Q ss_pred HHHhHhHHHHHHHHhcCHHHHHHHHHHHHhcCCCCccceeeee
Q 011164 447 KVACNLNNAACKLKLKDYKQAEKLCTKVQQQKKFLLLPIFNIY 489 (492)
Q Consensus 447 ~~~l~~N~a~~~lk~~~~~~ai~~~~~al~~dp~n~KA~~r~~ 489 (492)
...++.|+|.+++++++|++|+..++++++++|++..+++++.
T Consensus 6 ~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~p~~~~a~~~lg 48 (100)
T 3ma5_A 6 DPFTRYALAQEHLKHDNASRALALFEELVETDPDYVGTYYHLG 48 (100)
T ss_dssp CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHSTTCTHHHHHHH
T ss_pred CHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCcHHHHHHHH
Confidence 3668899999999999999999999999999999999888754
No 233
>3mkr_A Coatomer subunit epsilon; tetratricopeptide repeats (TPR), beta-hairpin, alpha-solenoi transport protein; 2.60A {Bos taurus}
Probab=96.60 E-value=0.0024 Score=60.98 Aligned_cols=68 Identities=9% Similarity=0.090 Sum_probs=54.5
Q ss_pred HHHhhhHHHHcccHHHHHHHHHHHHHHhcccCCCChHHHHHHHHHHHHhHhHHHHHHHHhcCHHH-HHHHHHHHHhcCCC
Q 011164 402 KKEQGNTLFKAGKYARASKRYEKAVKYIEYDTSFGDEEKKQAKALKVACNLNNAACKLKLKDYKQ-AEKLCTKVQQQKKF 480 (492)
Q Consensus 402 ~K~~Gn~~fk~~~~~~A~~~Y~~al~~l~~~~~~~~~~~~~~~~~~~~l~~N~a~~~lk~~~~~~-ai~~~~~al~~dp~ 480 (492)
+...|..+.+.|+|.+|...|++++.. .+....++.|++.++..+|++.+ +....+++++++|+
T Consensus 203 ~~~la~~~~~~g~~~eA~~~l~~al~~---------------~p~~~~~l~~l~~~~~~~g~~~eaa~~~~~~~~~~~P~ 267 (291)
T 3mkr_A 203 LNGQAACHMAQGRWEAAEGVLQEALDK---------------DSGHPETLINLVVLSQHLGKPPEVTNRYLSQLKDAHRS 267 (291)
T ss_dssp HHHHHHHHHHTTCHHHHHHHHHHHHHH---------------CTTCHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHCTT
T ss_pred HHHHHHHHHHcCCHHHHHHHHHHHHHh---------------CCCCHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHhCCC
Confidence 445677778888888888888888876 22346679999999999999987 56788999999999
Q ss_pred Cccc
Q 011164 481 LLLP 484 (492)
Q Consensus 481 n~KA 484 (492)
|+.+
T Consensus 268 ~~~~ 271 (291)
T 3mkr_A 268 HPFI 271 (291)
T ss_dssp CHHH
T ss_pred ChHH
Confidence 8643
No 234
>3o48_A Mitochondria fission 1 protein; tetratricopeptide repeat fold, TPR, scaffold, peroxisome, membrane fission, protein binding; 1.75A {Saccharomyces cerevisiae} PDB: 2pqr_A 2pqn_A 3uux_A
Probab=96.60 E-value=0.0024 Score=52.67 Aligned_cols=40 Identities=13% Similarity=0.082 Sum_probs=36.6
Q ss_pred HHHHhHhHHHHHHHHhcCHHHHHHHHHHHHhcCCCCccce
Q 011164 446 LKVACNLNNAACKLKLKDYKQAEKLCTKVQQQKKFLLLPI 485 (492)
Q Consensus 446 ~~~~l~~N~a~~~lk~~~~~~ai~~~~~al~~dp~n~KA~ 485 (492)
.+-.|++.+|.++.|+|+|.+|.++|+.+|+++|+|..|.
T Consensus 76 ~~Rd~LYyLAvg~yklgdY~~Ar~y~d~lL~~eP~N~QA~ 115 (134)
T 3o48_A 76 RRRECLYYLTIGCYKLGEYSMAKRYVDTLFEHERNNKQVG 115 (134)
T ss_dssp GHHHHHHHHHHHHHHHTCHHHHHHHHHHHHTTCTTCHHHH
T ss_pred hhHHHHHHHHHHHHHhhhHHHHHHHHHHHHhhCCCCHHHH
Confidence 4577888999999999999999999999999999998764
No 235
>1nzn_A CGI-135 protein, fission protein FIS1P; TPR, unknown function; 2.00A {Homo sapiens} SCOP: a.118.8.1 PDB: 1iyg_A
Probab=96.56 E-value=0.0021 Score=52.84 Aligned_cols=40 Identities=18% Similarity=0.075 Sum_probs=36.7
Q ss_pred HHHHhHhHHHHHHHHhcCHHHHHHHHHHHHhcCCCCccce
Q 011164 446 LKVACNLNNAACKLKLKDYKQAEKLCTKVQQQKKFLLLPI 485 (492)
Q Consensus 446 ~~~~l~~N~a~~~lk~~~~~~ai~~~~~al~~dp~n~KA~ 485 (492)
.+-.+++.+|..++|+++|.+|+++|+.+|+++|+|..|.
T Consensus 72 ~~Rd~lY~LAvg~yklg~Y~~A~~~~~~lL~~eP~n~QA~ 111 (126)
T 1nzn_A 72 EQRDYVFYLAVGNYRLKEYEKALKYVRGLLQTEPQNNQAK 111 (126)
T ss_dssp HHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHH
T ss_pred hHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHhCCCCHHHH
Confidence 4667889999999999999999999999999999998764
No 236
>3qwp_A SET and MYND domain-containing protein 3; SMYD3,SET and MYND domain, zinc finger MYND domain-containin 1, structural genomics; HET: SAM; 1.53A {Homo sapiens} PDB: 3mek_A* 3oxg_A* 3oxf_A* 3pdn_A* 3oxl_A* 3ru0_A*
Probab=96.56 E-value=0.0071 Score=61.20 Aligned_cols=74 Identities=7% Similarity=-0.085 Sum_probs=59.1
Q ss_pred HHHHHHHHhhhHHHHcccHHHHHHHHHHHHHHhcccCCCChHHHHHHHHHHHHhHhHHHHHHHHhcCHHHHHHHHHHHHh
Q 011164 397 EAAGKKKEQGNTLFKAGKYARASKRYEKAVKYIEYDTSFGDEEKKQAKALKVACNLNNAACKLKLKDYKQAEKLCTKVQQ 476 (492)
Q Consensus 397 ~~a~~~K~~Gn~~fk~~~~~~A~~~Y~~al~~l~~~~~~~~~~~~~~~~~~~~l~~N~a~~~lk~~~~~~ai~~~~~al~ 476 (492)
..+..+...-..+.++|+|++|+..|+++|.......... .......++|+|.+|..+|+|++|+..|.++|+
T Consensus 285 ~~~~~ll~~ie~~~~~g~~~~a~~~~~~~L~~~~~~lg~~-------h~~~~~~~~~L~~~y~~~g~~~eA~~~~~~~L~ 357 (429)
T 3qwp_A 285 KEVQESLKKIEELKAHWKWEQVLAMCQAIISSNSERLPDI-------NIYQLKVLDCAMDACINLGLLEEALFYGTRTME 357 (429)
T ss_dssp HHHHHHHHHHHHHHHTTCHHHHHHHHHHHHTCSSCCCCTT-------SHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHhhccHHHHHHHHHHHHHhccCcCCcc-------chHHHHHHHHHHHHHHhhccHHHHHHHHHHHHH
Confidence 3455555666778889999999999999997654332221 345688999999999999999999999999997
Q ss_pred c
Q 011164 477 Q 477 (492)
Q Consensus 477 ~ 477 (492)
+
T Consensus 358 i 358 (429)
T 3qwp_A 358 P 358 (429)
T ss_dssp H
T ss_pred h
Confidence 6
No 237
>3ro2_A PINS homolog, G-protein-signaling modulator 2; TPR repeat, protein-protein interaction, protein-binding, PR binding; 2.30A {Mus musculus}
Probab=96.55 E-value=0.0086 Score=56.63 Aligned_cols=83 Identities=16% Similarity=0.123 Sum_probs=49.1
Q ss_pred HHHHHHhhhHHHHcccHHHHHHHHHHHHHHhcccCC---------------CC--hHHHH------------HHHHHHHH
Q 011164 399 AGKKKEQGNTLFKAGKYARASKRYEKAVKYIEYDTS---------------FG--DEEKK------------QAKALKVA 449 (492)
Q Consensus 399 a~~~K~~Gn~~fk~~~~~~A~~~Y~~al~~l~~~~~---------------~~--~~~~~------------~~~~~~~~ 449 (492)
+..+...|..+++.|+|.+|+..|+++++.-..... .. ++... .-......
T Consensus 5 ~~~l~~~g~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~ 84 (338)
T 3ro2_A 5 CLELALEGERLCKSGDCRAGVSFFEAAVQVGTEDLKTLSAIYSQLGNAYFYLHDYAKALEYHHHDLTLARTIGDQLGEAK 84 (338)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCCSCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHTCHHHHHH
T ss_pred HHHHHHHHHHHHHhccHHHHHHHHHHHHhhCcccHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHhhcccccHHHHH
Confidence 445666777888888888888888888775221100 00 00000 00334455
Q ss_pred hHhHHHHHHHHhcCHHHHHHHHHHHHhcCCCC
Q 011164 450 CNLNNAACKLKLKDYKQAEKLCTKVQQQKKFL 481 (492)
Q Consensus 450 l~~N~a~~~lk~~~~~~ai~~~~~al~~dp~n 481 (492)
++.++|.++..+++|++|+..+.+++++.+..
T Consensus 85 ~~~~l~~~~~~~g~~~~A~~~~~~al~~~~~~ 116 (338)
T 3ro2_A 85 ASGNLGNTLKVLGNFDEAIVCCQRHLDISREL 116 (338)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHccCHHHHHHHHHHHHHHHHHh
Confidence 66777777777777777777777777776643
No 238
>4a1s_A PINS, partner of inscuteable; cell cycle, LGN, mitotic spindle orientation, asymmetric CEL divisions; 2.10A {Drosophila melanogaster}
Probab=96.46 E-value=0.0028 Score=62.87 Aligned_cols=71 Identities=13% Similarity=0.154 Sum_probs=60.8
Q ss_pred HHHHHHHhhhHHHHcccHHHHHHHHHHHHHHhcccCCCChHHHHHHHHHHHHhHhHHHHHHHHhcCHHHHHHHHHHHHhc
Q 011164 398 AAGKKKEQGNTLFKAGKYARASKRYEKAVKYIEYDTSFGDEEKKQAKALKVACNLNNAACKLKLKDYKQAEKLCTKVQQQ 477 (492)
Q Consensus 398 ~a~~~K~~Gn~~fk~~~~~~A~~~Y~~al~~l~~~~~~~~~~~~~~~~~~~~l~~N~a~~~lk~~~~~~ai~~~~~al~~ 477 (492)
.+..+...|..++..|+|.+|+..|++++........ ......++.++|.++..+++|++|+..+.+++++
T Consensus 85 ~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~~~~~~---------~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~ 155 (411)
T 4a1s_A 85 LSAIYSQLGNAYFYLGDYNKAMQYHKHDLTLAKSMND---------RLGEAKSSGNLGNTLKVMGRFDEAAICCERHLTL 155 (411)
T ss_dssp HHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHTTC---------HHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHccC---------chHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHH
Confidence 3456778899999999999999999999987643211 4566789999999999999999999999999988
No 239
>3fp2_A TPR repeat-containing protein YHR117W; TOM71, mitochondria translocation, allosteric REG phosphoprotein, TPR repeat, ATP-binding; 1.98A {Saccharomyces cerevisiae} PDB: 3fp3_A 3fp4_A 3lca_A
Probab=96.43 E-value=0.0024 Score=65.65 Aligned_cols=71 Identities=15% Similarity=0.123 Sum_probs=42.5
Q ss_pred HHHHHhhhHHHHcccHHHHHHHHHHHHHHhcccCCCChHHHHHHHHHHHHhHhHHHHHHHHhcCHHHHHHHHHHHHhcCC
Q 011164 400 GKKKEQGNTLFKAGKYARASKRYEKAVKYIEYDTSFGDEEKKQAKALKVACNLNNAACKLKLKDYKQAEKLCTKVQQQKK 479 (492)
Q Consensus 400 ~~~K~~Gn~~fk~~~~~~A~~~Y~~al~~l~~~~~~~~~~~~~~~~~~~~l~~N~a~~~lk~~~~~~ai~~~~~al~~dp 479 (492)
..+...|..+++.|+|.+|+..|+++++..... ..++.++|.++.++++|++|+..++++++++|
T Consensus 311 ~~~~~l~~~~~~~~~~~~A~~~~~~a~~~~~~~---------------~~~~~~la~~~~~~g~~~~A~~~~~~~~~~~~ 375 (537)
T 3fp2_A 311 PTYYHRGQMYFILQDYKNAKEDFQKAQSLNPEN---------------VYPYIQLACLLYKQGKFTESEAFFNETKLKFP 375 (537)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTC---------------SHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCT
T ss_pred HHHHHHHHHHHhcCCHHHHHHHHHHHHHhCCCC---------------HHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCC
Confidence 345667777888888888888888888753211 23444555555555555555555555555555
Q ss_pred CCccce
Q 011164 480 FLLLPI 485 (492)
Q Consensus 480 ~n~KA~ 485 (492)
++..++
T Consensus 376 ~~~~~~ 381 (537)
T 3fp2_A 376 TLPEVP 381 (537)
T ss_dssp TCTHHH
T ss_pred CChHHH
Confidence 554443
No 240
>3nf1_A KLC 1, kinesin light chain 1; TPR, structural genomics consortium (SGC), motor PR transport protein; 2.80A {Homo sapiens}
Probab=96.43 E-value=0.0031 Score=59.40 Aligned_cols=73 Identities=16% Similarity=0.035 Sum_probs=59.2
Q ss_pred HHHHHHHhhhHHHHcccHHHHHHHHHHHHHHhcccCCCChHHHHHHHHHHHHhHhHHHHHHHHhcCHHHHHHHHHHHHhc
Q 011164 398 AAGKKKEQGNTLFKAGKYARASKRYEKAVKYIEYDTSFGDEEKKQAKALKVACNLNNAACKLKLKDYKQAEKLCTKVQQQ 477 (492)
Q Consensus 398 ~a~~~K~~Gn~~fk~~~~~~A~~~Y~~al~~l~~~~~~~~~~~~~~~~~~~~l~~N~a~~~lk~~~~~~ai~~~~~al~~ 477 (492)
.+..+...|..++..|+|.+|+..|+++++......... ......++.|+|.++.++++|++|+..+.+++++
T Consensus 110 ~~~~~~~l~~~~~~~g~~~~A~~~~~~a~~~~~~~~~~~-------~~~~~~~~~~la~~~~~~~~~~~A~~~~~~a~~~ 182 (311)
T 3nf1_A 110 VAATLNNLAVLYGKRGKYKEAEPLCKRALEIREKVLGKD-------HPDVAKQLNNLALLCQNQGKYEEVEYYYQRALEI 182 (311)
T ss_dssp HHHHHHHHHHHHHTTTCHHHHHHHHHHHHHHHHHHHCTT-------CHHHHHHHHHHHHHHHTTTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHcCcHHHHHHHHHHHHHHHHHhcCCC-------ChHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHH
Confidence 345567788889999999999999999998753210000 2456788999999999999999999999999998
No 241
>3nf1_A KLC 1, kinesin light chain 1; TPR, structural genomics consortium (SGC), motor PR transport protein; 2.80A {Homo sapiens}
Probab=96.38 E-value=0.0084 Score=56.36 Aligned_cols=75 Identities=13% Similarity=0.018 Sum_probs=62.4
Q ss_pred HHHHHHHHHhhhHHHHcccHHHHHHHHHHHHHHhcccCCCChHHHHHHHHHHHHhHhHHHHHHHHhcCHHHHHHHHHHHH
Q 011164 396 IEAAGKKKEQGNTLFKAGKYARASKRYEKAVKYIEYDTSFGDEEKKQAKALKVACNLNNAACKLKLKDYKQAEKLCTKVQ 475 (492)
Q Consensus 396 l~~a~~~K~~Gn~~fk~~~~~~A~~~Y~~al~~l~~~~~~~~~~~~~~~~~~~~l~~N~a~~~lk~~~~~~ai~~~~~al 475 (492)
...+..+...|..++..|+|.+|+..|+++++........ -......++.++|.++..+++|++|+..+.+++
T Consensus 24 ~~~~~~~~~l~~~~~~~g~~~~A~~~~~~a~~~~~~~~~~-------~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~al 96 (311)
T 3nf1_A 24 PARLRTLHNLVIQYASQGRYEVAVPLCKQALEDLEKTSGH-------DHPDVATMLNILALVYRDQNKYKDAANLLNDAL 96 (311)
T ss_dssp CHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHHCS-------SSHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHH
T ss_pred hHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHcCC-------CCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHH
Confidence 3556778899999999999999999999999875432100 134567889999999999999999999999999
Q ss_pred hc
Q 011164 476 QQ 477 (492)
Q Consensus 476 ~~ 477 (492)
++
T Consensus 97 ~~ 98 (311)
T 3nf1_A 97 AI 98 (311)
T ss_dssp HH
T ss_pred HH
Confidence 87
No 242
>3sf4_A G-protein-signaling modulator 2; tetratricopeptide repeat, TPR, cell polarity, asymmetric CEL division, mitotic spindle orientation; 2.60A {Homo sapiens}
Probab=96.34 E-value=0.0095 Score=58.42 Aligned_cols=73 Identities=14% Similarity=0.109 Sum_probs=57.8
Q ss_pred HHHHHHhhhHHHHcccHHHHHHHHHHHHHHhcccCCCChHHHHHHHHHHHHhHhHHHHHHHHhcCHHHHHHHHHHHHhcC
Q 011164 399 AGKKKEQGNTLFKAGKYARASKRYEKAVKYIEYDTSFGDEEKKQAKALKVACNLNNAACKLKLKDYKQAEKLCTKVQQQK 478 (492)
Q Consensus 399 a~~~K~~Gn~~fk~~~~~~A~~~Y~~al~~l~~~~~~~~~~~~~~~~~~~~l~~N~a~~~lk~~~~~~ai~~~~~al~~d 478 (492)
+..+...|..++..|+|.+|+..|++++........ ......++.++|.++..+|+|++|+..+.+++++.
T Consensus 47 ~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~~~~~---------~~~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~ 117 (406)
T 3sf4_A 47 SAIYSQLGNAYFYLHDYAKALEYHHHDLTLARTIGD---------QLGEAKASGNLGNTLKVLGNFDEAIVCCQRHLDIS 117 (406)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTC---------HHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHhccc---------cHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHH
Confidence 455667788888888888888888888876543211 34567889999999999999999999999999987
Q ss_pred CC
Q 011164 479 KF 480 (492)
Q Consensus 479 p~ 480 (492)
+.
T Consensus 118 ~~ 119 (406)
T 3sf4_A 118 RE 119 (406)
T ss_dssp HH
T ss_pred Hh
Confidence 64
No 243
>3sf4_A G-protein-signaling modulator 2; tetratricopeptide repeat, TPR, cell polarity, asymmetric CEL division, mitotic spindle orientation; 2.60A {Homo sapiens}
Probab=96.33 E-value=0.011 Score=57.83 Aligned_cols=68 Identities=19% Similarity=0.106 Sum_probs=58.3
Q ss_pred HHHHHHhhhHHHHcccHHHHHHHHHHHHHHhcccCCCChHHHHHHHHHHHHhHhHHHHHHHHhcCHHHHHHHHHHHHhc
Q 011164 399 AGKKKEQGNTLFKAGKYARASKRYEKAVKYIEYDTSFGDEEKKQAKALKVACNLNNAACKLKLKDYKQAEKLCTKVQQQ 477 (492)
Q Consensus 399 a~~~K~~Gn~~fk~~~~~~A~~~Y~~al~~l~~~~~~~~~~~~~~~~~~~~l~~N~a~~~lk~~~~~~ai~~~~~al~~ 477 (492)
+..+...|..+++.|+|.+|+..|+++++..... ......++.++|.++..+++|.+|+..+.+++++
T Consensus 9 ~~~l~~~g~~~~~~g~~~~A~~~~~~al~~~~~~-----------~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~ 76 (406)
T 3sf4_A 9 CLELALEGERLCKSGDCRAGVSFFEAAVQVGTED-----------LKTLSAIYSQLGNAYFYLHDYAKALEYHHHDLTL 76 (406)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCCSC-----------HHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhccHHHHHHHHHHHHhcCccc-----------HHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHH
Confidence 4566788999999999999999999999873211 3345778999999999999999999999999887
No 244
>3ro2_A PINS homolog, G-protein-signaling modulator 2; TPR repeat, protein-protein interaction, protein-binding, PR binding; 2.30A {Mus musculus}
Probab=96.29 E-value=0.017 Score=54.59 Aligned_cols=73 Identities=15% Similarity=0.003 Sum_probs=51.2
Q ss_pred HHHHHHhhhHHHHcccHHHHHHHHHHHHHHhcccCCCChHHHHHHHHHHHHhHhHHHHHHHHhcCHHHHHHHHHHHHhcC
Q 011164 399 AGKKKEQGNTLFKAGKYARASKRYEKAVKYIEYDTSFGDEEKKQAKALKVACNLNNAACKLKLKDYKQAEKLCTKVQQQK 478 (492)
Q Consensus 399 a~~~K~~Gn~~fk~~~~~~A~~~Y~~al~~l~~~~~~~~~~~~~~~~~~~~l~~N~a~~~lk~~~~~~ai~~~~~al~~d 478 (492)
+..+...|..+++.|+|.+|+..|++++........ ......++.++|.++.++|++++|+..+++++++.
T Consensus 263 ~~~~~~la~~~~~~g~~~~A~~~~~~a~~~~~~~~~---------~~~~~~~~~~la~~~~~~g~~~~A~~~~~~a~~~~ 333 (338)
T 3ro2_A 263 AQSCYSLGNTYTLLQDYEKAIDYHLKHLAIAQELKD---------RIGEGRACWSLGNAYTALGNHDQAMHFAEKHLEIS 333 (338)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHTC---------HHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHC-
T ss_pred HHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHhcCC---------cHHHHHHHHHHHHHHHHcCChHHHHHHHHHHHHHH
Confidence 344556666777777777777777777766432111 33446688899999999999999999999999886
Q ss_pred CC
Q 011164 479 KF 480 (492)
Q Consensus 479 p~ 480 (492)
+.
T Consensus 334 ~~ 335 (338)
T 3ro2_A 334 RE 335 (338)
T ss_dssp --
T ss_pred Hh
Confidence 54
No 245
>3ffl_A Anaphase-promoting complex subunit 7; tetratricopeptide repeat motif, helis-turn-helix, cell cycle division, mitosis, TPR repeat; 2.50A {Homo sapiens}
Probab=96.22 E-value=0.018 Score=49.41 Aligned_cols=76 Identities=17% Similarity=0.175 Sum_probs=51.3
Q ss_pred HHHHHHHhhhHHHHcccHHHHHHHHHHHHHHhcccCCCCh--------HHHH--HHHHHHHHhHhHHHHHHHHhcCHHHH
Q 011164 398 AAGKKKEQGNTLFKAGKYARASKRYEKAVKYIEYDTSFGD--------EEKK--QAKALKVACNLNNAACKLKLKDYKQA 467 (492)
Q Consensus 398 ~a~~~K~~Gn~~fk~~~~~~A~~~Y~~al~~l~~~~~~~~--------~~~~--~~~~~~~~l~~N~a~~~lk~~~~~~a 467 (492)
.+..+--.|+.+|.+++|.+|...|++||.+.+....... .-.. .-..-...+.+.+|.||++++++.+|
T Consensus 62 ~~~~l~~ladalf~~~eyrrA~~~y~qALq~~k~l~k~~s~~~~~~~~ss~p~s~~~~~e~Elkykia~C~~~l~~~~~A 141 (167)
T 3ffl_A 62 KYQLLVYHADSLFHDKEYRNAVSKYTMALQQKKALSKTSKVRPSTGNSASTPQSQCLPSEIEVKYKLAECYTVLKQDKDA 141 (167)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHCC--------------------CCCCHHHHHHHHHHHHHHTTCHHHH
T ss_pred HHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHhcCCCccccccccCCCcccccccchHHHHHHHHHHHHHHCCHHHH
Confidence 3455677899999999999999999999987653211100 0000 00011235667799999999999999
Q ss_pred HHHHHH
Q 011164 468 EKLCTK 473 (492)
Q Consensus 468 i~~~~~ 473 (492)
|.....
T Consensus 142 i~~Le~ 147 (167)
T 3ffl_A 142 IAILDG 147 (167)
T ss_dssp HHHHHT
T ss_pred HHHHhc
Confidence 987543
No 246
>2gw1_A Mitochondrial precursor proteins import receptor; TPR, protein transport; 3.00A {Saccharomyces cerevisiae}
Probab=96.12 E-value=0.0073 Score=61.46 Aligned_cols=70 Identities=11% Similarity=-0.008 Sum_probs=60.4
Q ss_pred HHHHHhhhHHHHcccHHHHHHHHHHHHHHhcccCCCChHHHHHHHHHHHHhHhHHHHHHHHhcCHHHHHHHHHHHHhcCC
Q 011164 400 GKKKEQGNTLFKAGKYARASKRYEKAVKYIEYDTSFGDEEKKQAKALKVACNLNNAACKLKLKDYKQAEKLCTKVQQQKK 479 (492)
Q Consensus 400 ~~~K~~Gn~~fk~~~~~~A~~~Y~~al~~l~~~~~~~~~~~~~~~~~~~~l~~N~a~~~lk~~~~~~ai~~~~~al~~dp 479 (492)
..+...|..+++.|+|.+|+..|+++++.-. ....++.++|.|+.++++|++|+..+++++.++|
T Consensus 40 ~~~~~la~~~~~~g~~~~A~~~~~~al~~~p---------------~~~~~~~~l~~~~~~~g~~~~A~~~~~~~~~~~~ 104 (514)
T 2gw1_A 40 VFYSNLSACYVSVGDLKKVVEMSTKALELKP---------------DYSKVLLRRASANEGLGKFADAMFDLSVLSLNGD 104 (514)
T ss_dssp HHHHHHHHHHHHHTCHHHHHHHHHHHHHHCS---------------CCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHSSS
T ss_pred HHHHhHHHHHHHHhhHHHHHHHHHHHhccCh---------------HHHHHHHHHHHHHHHHhhHHHHHHHHHHHHhcCC
Confidence 3566789999999999999999999998622 2367899999999999999999999999999998
Q ss_pred CCccc
Q 011164 480 FLLLP 484 (492)
Q Consensus 480 ~n~KA 484 (492)
.+...
T Consensus 105 ~~~~~ 109 (514)
T 2gw1_A 105 FNDAS 109 (514)
T ss_dssp CCGGG
T ss_pred Cccch
Confidence 66544
No 247
>1y8m_A FIS1; mitochondria, unknown function; NMR {Saccharomyces cerevisiae} SCOP: a.118.8.1
Probab=96.12 E-value=0.0042 Score=51.89 Aligned_cols=39 Identities=13% Similarity=0.103 Sum_probs=35.7
Q ss_pred HHHhHhHHHHHHHHhcCHHHHHHHHHHHHhcCCCCccce
Q 011164 447 KVACNLNNAACKLKLKDYKQAEKLCTKVQQQKKFLLLPI 485 (492)
Q Consensus 447 ~~~l~~N~a~~~lk~~~~~~ai~~~~~al~~dp~n~KA~ 485 (492)
+-.|++.+|.++.|+++|.+|.++|+..|+++|+|..|.
T Consensus 76 ~RdcLYyLAvg~ykl~~Y~~Ar~y~d~lL~~eP~n~QA~ 114 (144)
T 1y8m_A 76 RRECLYYLTIGCYKLGEYSMAKRYVDTLFEHERNNKQVG 114 (144)
T ss_dssp HHHHHHHHHHHHHTTTCHHHHHHHHHHHHHTCCCCHHHH
T ss_pred hhHHHHHHHHHHHHhhhHHHHHHHHHHHHhcCCCcHHHH
Confidence 566888999999999999999999999999999997663
No 248
>3qou_A Protein YBBN; thioredoxin-like fold, tetratricopeptide repeat, lysine dimethylation, protein binding; HET: MLY; 1.80A {Escherichia coli} PDB: 3qdn_A*
Probab=96.05 E-value=0.0038 Score=59.36 Aligned_cols=89 Identities=9% Similarity=-0.115 Sum_probs=62.4
Q ss_pred HHHHHHhhhHHHHcccHHHHHHHHHHHHHHhccc-------------CCCChHHHH------HHHHHHHHhHhHHHHHHH
Q 011164 399 AGKKKEQGNTLFKAGKYARASKRYEKAVKYIEYD-------------TSFGDEEKK------QAKALKVACNLNNAACKL 459 (492)
Q Consensus 399 a~~~K~~Gn~~fk~~~~~~A~~~Y~~al~~l~~~-------------~~~~~~~~~------~~~~~~~~l~~N~a~~~l 459 (492)
+..+...|..+.+.|++.+|+..|++++..-... ....++... ...+-...++.|+|.+++
T Consensus 151 ~~a~~~la~~~~~~g~~~~A~~~l~~~~~~~p~~~~~~~~~~~~l~~~~~~~~a~~~l~~al~~~P~~~~~~~~la~~l~ 230 (287)
T 3qou_A 151 GEIGLLLAETLIALNRSEDAEAVLXTIPLQDQDTRYQGLVAQIELLXQAADTPEIQQLQQQVAENPEDAALATQLALQLH 230 (287)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHTTSCGGGCSHHHHHHHHHHHHHHHHTSCHHHHHHHHHHHHCTTCHHHHHHHHHHHH
T ss_pred hhHHHHHHHHHHHCCCHHHHHHHHHhCchhhcchHHHHHHHHHHHHhhcccCccHHHHHHHHhcCCccHHHHHHHHHHHH
Confidence 4566778888888999999999888876531100 000001111 112334678999999999
Q ss_pred HhcCHHHHHHHHHHHHhcCCCC--ccceee
Q 011164 460 KLKDYKQAEKLCTKVQQQKKFL--LLPIFN 487 (492)
Q Consensus 460 k~~~~~~ai~~~~~al~~dp~n--~KA~~r 487 (492)
++|++++|+..+.++|+.+|++ ..|+.+
T Consensus 231 ~~g~~~~A~~~l~~~l~~~p~~~~~~a~~~ 260 (287)
T 3qou_A 231 QVGRNEEALELLFGHLRXDLTAADGQTRXT 260 (287)
T ss_dssp HTTCHHHHHHHHHHHHHHCTTGGGGHHHHH
T ss_pred HcccHHHHHHHHHHHHhcccccccchHHHH
Confidence 9999999999999999999988 555443
No 249
>1ouv_A Conserved hypothetical secreted protein; TPR repeat, HCP repeat, cysteine rich protein, loop-helix-TU repeat protein, hydrolase; 2.00A {Helicobacter pylori} SCOP: a.118.18.1
Probab=95.92 E-value=0.0089 Score=55.70 Aligned_cols=86 Identities=14% Similarity=0.023 Sum_probs=46.2
Q ss_pred HHHHHhhhHHHHcccHHHHHHHHHHHHHHhcc----------cC----CCChHH-H----HHHHHHHHHhHhHHHHHHHH
Q 011164 400 GKKKEQGNTLFKAGKYARASKRYEKAVKYIEY----------DT----SFGDEE-K----KQAKALKVACNLNNAACKLK 460 (492)
Q Consensus 400 ~~~K~~Gn~~fk~~~~~~A~~~Y~~al~~l~~----------~~----~~~~~~-~----~~~~~~~~~l~~N~a~~~lk 460 (492)
..+...|..+++.+++.+|+..|+++++.-.. .. ..+.++ . ..+..-...++.|++.++..
T Consensus 7 ~a~~~lg~~~~~~~~~~~A~~~~~~a~~~~~~~a~~~lg~~~~~g~~~~~~~~~A~~~~~~a~~~~~~~a~~~lg~~~~~ 86 (273)
T 1ouv_A 7 KELVGLGAKSYKEKDFTQAKKYFEKACDLKENSGCFNLGVLYYQGQGVEKNLKKAASFYAKACDLNYSNGCHLLGNLYYS 86 (273)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHTSSSCCCHHHHHHHHHHHHHTTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHcCCCcCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHhC
Confidence 34556777777777777887777777762000 00 000000 0 00011134556667777777
Q ss_pred ----hcCHHHHHHHHHHHHhcCCCCccceee
Q 011164 461 ----LKDYKQAEKLCTKVQQQKKFLLLPIFN 487 (492)
Q Consensus 461 ----~~~~~~ai~~~~~al~~dp~n~KA~~r 487 (492)
.+++++|+..+.++++.+ +..++++
T Consensus 87 g~~~~~~~~~A~~~~~~a~~~~--~~~a~~~ 115 (273)
T 1ouv_A 87 GQGVSQNTNKALQYYSKACDLK--YAEGCAS 115 (273)
T ss_dssp TSSSCCCHHHHHHHHHHHHHTT--CHHHHHH
T ss_pred CCCcccCHHHHHHHHHHHHHcC--CccHHHH
Confidence 677777777777776653 4455444
No 250
>2ond_A Cleavage stimulation factor 77 kDa subunit; HAT domain, structural protein; 2.80A {Mus musculus} SCOP: a.118.8.7
Probab=95.86 E-value=0.0099 Score=56.85 Aligned_cols=54 Identities=11% Similarity=0.128 Sum_probs=30.9
Q ss_pred HHHHHHHHHHHHHHhcccCCCChHHHHHHHHHHHHhHhHHHHHHHHhcCHHHHHHHHHHHHhcCCCCc
Q 011164 415 YARASKRYEKAVKYIEYDTSFGDEEKKQAKALKVACNLNNAACKLKLKDYKQAEKLCTKVQQQKKFLL 482 (492)
Q Consensus 415 ~~~A~~~Y~~al~~l~~~~~~~~~~~~~~~~~~~~l~~N~a~~~lk~~~~~~ai~~~~~al~~dp~n~ 482 (492)
+.+|+..|++|++.+.. ....++.|++..+.+++++++|+..++++|+++|.+.
T Consensus 80 ~~~A~~~~~rAl~~~~p--------------~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~~~p~~~ 133 (308)
T 2ond_A 80 SDEAANIYERAISTLLK--------------KNMLLYFAYADYEESRMKYEKVHSIYNRLLAIEDIDP 133 (308)
T ss_dssp HHHHHHHHHHHHTTTTT--------------TCHHHHHHHHHHHHHTTCHHHHHHHHHHHHTSSSSCT
T ss_pred hHHHHHHHHHHHHHhCc--------------ccHHHHHHHHHHHHhcCCHHHHHHHHHHHHhccccCc
Confidence 48999999999984321 1133445555555555555555555555555555444
No 251
>2l6j_A TPR repeat-containing protein associated with HSP; tetratricopeptide repeat (TPR), HSP90 CO-factor, protein BIN; NMR {Saccharomyces cerevisiae}
Probab=95.76 E-value=0.0033 Score=49.41 Aligned_cols=42 Identities=10% Similarity=-0.030 Sum_probs=38.3
Q ss_pred HHhHhHHHHHHHHhcCHHHHHHHHHHHHhcCCCCccceeeee
Q 011164 448 VACNLNNAACKLKLKDYKQAEKLCTKVQQQKKFLLLPIFNIY 489 (492)
Q Consensus 448 ~~l~~N~a~~~lk~~~~~~ai~~~~~al~~dp~n~KA~~r~~ 489 (492)
...+.++|.+++++++|++|+..++++++++|++..+++++.
T Consensus 4 ~~~~~~~g~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~lg 45 (111)
T 2l6j_A 4 FEKQKEQGNSLFKQGLYREAVHCYDQLITAQPQNPVGYSNKA 45 (111)
T ss_dssp HHHHHHHHHHHHTTTCHHHHHHHHHHHHHHCTTCHHHHHHHH
T ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHhcCCCCHHHHHHHH
Confidence 567889999999999999999999999999999998887654
No 252
>2r5s_A Uncharacterized protein VP0806; APC090868.1, vibrio parahaemolyticus RIMD 22 structural genomics, PSI-2, protein structure initiative; HET: MES; 2.14A {Vibrio parahaemolyticus}
Probab=95.76 E-value=0.0052 Score=53.42 Aligned_cols=89 Identities=12% Similarity=-0.019 Sum_probs=62.1
Q ss_pred HHHHHHHhhhHHHHcccHHHHHHHHHHHHHHhcccCC--------------CChHHHHH------HHHHHHHhHhHHHHH
Q 011164 398 AAGKKKEQGNTLFKAGKYARASKRYEKAVKYIEYDTS--------------FGDEEKKQ------AKALKVACNLNNAAC 457 (492)
Q Consensus 398 ~a~~~K~~Gn~~fk~~~~~~A~~~Y~~al~~l~~~~~--------------~~~~~~~~------~~~~~~~l~~N~a~~ 457 (492)
....+...|..+++.|++.+|+..|++++..-. ... ...+.... ..+....++.|+|.+
T Consensus 39 ~~~a~~~la~~~~~~g~~~~A~~~~~~a~~~~p-~~~~~~~~~~~~~~~~~~~~~a~~~~~~al~~~P~~~~~~~~la~~ 117 (176)
T 2r5s_A 39 RGDVKLAKADCLLETKQFELAQELLATIPLEYQ-DNSYKSLIAKLELHQQAAESPELKRLEQELAANPDNFELACELAVQ 117 (176)
T ss_dssp SHHHHHHHHHHHHHTTCHHHHHHHHTTCCGGGC-CHHHHHHHHHHHHHHHHTSCHHHHHHHHHHHHSTTCHHHHHHHHHH
T ss_pred cHHHHHHHHHHHHHCCCHHHHHHHHHHhhhccC-ChHHHHHHHHHHHHhhcccchHHHHHHHHHHhCCCCHHHHHHHHHH
Confidence 345567788888999999999999888765421 000 00000111 122236789999999
Q ss_pred HHHhcCHHHHHHHHHHHHhcCCCCcc--ceee
Q 011164 458 KLKLKDYKQAEKLCTKVQQQKKFLLL--PIFN 487 (492)
Q Consensus 458 ~lk~~~~~~ai~~~~~al~~dp~n~K--A~~r 487 (492)
+.++|++++|+..+.++++++|++.. ++++
T Consensus 118 ~~~~g~~~~A~~~~~~~l~~~p~~~~~~a~~~ 149 (176)
T 2r5s_A 118 YNQVGRDEEALELLWNILKVNLGAQDGEVKKT 149 (176)
T ss_dssp HHHTTCHHHHHHHHHHHHTTCTTTTTTHHHHH
T ss_pred HHHcccHHHHHHHHHHHHHhCcccChHHHHHH
Confidence 99999999999999999999997643 5544
No 253
>2xpi_A Anaphase-promoting complex subunit CUT9; cell cycle, TPR, ubiquitin ligase; 2.60A {Schizosaccharomyces pombe}
Probab=95.72 E-value=0.0099 Score=62.03 Aligned_cols=86 Identities=10% Similarity=-0.066 Sum_probs=46.1
Q ss_pred HHHHhhhHHHHcccHHHHHHHHHHHHHHhcccC-------------CCChHHHHHHHH------HHHHhHhHHHHHHHHh
Q 011164 401 KKKEQGNTLFKAGKYARASKRYEKAVKYIEYDT-------------SFGDEEKKQAKA------LKVACNLNNAACKLKL 461 (492)
Q Consensus 401 ~~K~~Gn~~fk~~~~~~A~~~Y~~al~~l~~~~-------------~~~~~~~~~~~~------~~~~l~~N~a~~~lk~ 461 (492)
.+...|+.+++.|++.+|+..|+++++.-.... ...++....++. ....++++++.++.+.
T Consensus 375 ~~~~l~~~~~~~g~~~~A~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~~~~~~~~~~~~~~~l~~~~~~~ 454 (597)
T 2xpi_A 375 TWLAVGIYYLCVNKISEARRYFSKSSTMDPQFGPAWIGFAHSFAIEGEHDQAISAYTTAARLFQGTHLPYLFLGMQHMQL 454 (597)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHTCHHHHHHHHHHHHHTTTTCSHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhccHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCccchHHHHHHHHHHHHc
Confidence 445567788888899999988888887421100 000000011111 1123455556666666
Q ss_pred cCHHHHHHHHHHHHhcCCCCcccee
Q 011164 462 KDYKQAEKLCTKVQQQKKFLLLPIF 486 (492)
Q Consensus 462 ~~~~~ai~~~~~al~~dp~n~KA~~ 486 (492)
|++++|+..++++++++|++..+++
T Consensus 455 g~~~~A~~~~~~~~~~~~~~~~~~~ 479 (597)
T 2xpi_A 455 GNILLANEYLQSSYALFQYDPLLLN 479 (597)
T ss_dssp TCHHHHHHHHHHHHHHCCCCHHHHH
T ss_pred CCHHHHHHHHHHHHHhCCCChHHHH
Confidence 6666666666666666555554443
No 254
>1dce_A Protein (RAB geranylgeranyltransferase alpha subunit); 2.0 A resolution, N-formylmethionine, alpha subunit; HET: FME; 2.00A {Rattus norvegicus} SCOP: a.118.6.1 b.7.4.1 c.10.2.2 PDB: 1ltx_A*
Probab=95.62 E-value=0.006 Score=64.12 Aligned_cols=73 Identities=7% Similarity=-0.038 Sum_probs=49.0
Q ss_pred HHHHhhhHHHHccc----------HHHHHHHHHHHHHHhcccCCCChHHHHHHHHHHHHhHhHHHHHHHHhc--CHHHHH
Q 011164 401 KKKEQGNTLFKAGK----------YARASKRYEKAVKYIEYDTSFGDEEKKQAKALKVACNLNNAACKLKLK--DYKQAE 468 (492)
Q Consensus 401 ~~K~~Gn~~fk~~~----------~~~A~~~Y~~al~~l~~~~~~~~~~~~~~~~~~~~l~~N~a~~~lk~~--~~~~ai 468 (492)
.+.-+|..+.+.++ |++|+..|.++++. .+....+|++|+.+..+++ +|++++
T Consensus 65 aW~~R~~~l~~l~~~~~~~~~~~~~~~eL~~~~~~l~~---------------~pK~y~aW~hR~w~l~~l~~~~~~~el 129 (567)
T 1dce_A 65 LWNCRREVLQHLETEKSPEESAALVKAELGFLESCLRV---------------NPKSYGTWHHRCWLLSRLPEPNWAREL 129 (567)
T ss_dssp HHHHHHHHHHHHHTTSCHHHHHHHHHHHHHHHHHHHHH---------------CTTCHHHHHHHHHHHHTCSSCCHHHHH
T ss_pred HHHHHHHHHHhcccccchhhhhhhHHHHHHHHHHHHHh---------------CCCCHHHHHHHHHHHHHcccccHHHHH
Confidence 44455666666666 89999999999875 2233566667777777776 557777
Q ss_pred HHHHHHHhcCCCCccceeee
Q 011164 469 KLCTKVQQQKKFLLLPIFNI 488 (492)
Q Consensus 469 ~~~~~al~~dp~n~KA~~r~ 488 (492)
..|+++|++||.|..||+.+
T Consensus 130 ~~~~k~l~~d~~N~~aW~~R 149 (567)
T 1dce_A 130 ELCARFLEADERNFHCWDYR 149 (567)
T ss_dssp HHHHHHHHHCTTCHHHHHHH
T ss_pred HHHHHHHhhccccccHHHHH
Confidence 77777777777766666543
No 255
>2ond_A Cleavage stimulation factor 77 kDa subunit; HAT domain, structural protein; 2.80A {Mus musculus} SCOP: a.118.8.7
Probab=95.52 E-value=0.011 Score=56.54 Aligned_cols=69 Identities=9% Similarity=0.048 Sum_probs=44.4
Q ss_pred HHHhhhHHHHcccHHHHHHHHHHHHHHhcccCCCChHHHHHHHHHHHHhHhHHHHHHHHhcCHHHHHHHHHHHHhcCCCC
Q 011164 402 KKEQGNTLFKAGKYARASKRYEKAVKYIEYDTSFGDEEKKQAKALKVACNLNNAACKLKLKDYKQAEKLCTKVQQQKKFL 481 (492)
Q Consensus 402 ~K~~Gn~~fk~~~~~~A~~~Y~~al~~l~~~~~~~~~~~~~~~~~~~~l~~N~a~~~lk~~~~~~ai~~~~~al~~dp~n 481 (492)
+...|+-+.+.|++.+|...|+++++.-... . ..++.|++.++.+++++++|+..++++++++|.+
T Consensus 102 ~~~~~~~~~~~~~~~~A~~~~~~al~~~p~~---~-----------~~~~~~~~~~~~~~~~~~~A~~~~~~a~~~~p~~ 167 (308)
T 2ond_A 102 YFAYADYEESRMKYEKVHSIYNRLLAIEDID---P-----------TLVYIQYMKFARRAEGIKSGRMIFKKAREDARTR 167 (308)
T ss_dssp HHHHHHHHHHTTCHHHHHHHHHHHHTSSSSC---T-----------HHHHHHHHHHHHHHHCHHHHHHHHHHHHTSTTCC
T ss_pred HHHHHHHHHhcCCHHHHHHHHHHHHhccccC---c-----------cHHHHHHHHHHHHhcCHHHHHHHHHHHHhcCCCC
Confidence 3456666677899999999999999742110 0 0156666666666666666666666666666655
Q ss_pred ccc
Q 011164 482 LLP 484 (492)
Q Consensus 482 ~KA 484 (492)
..+
T Consensus 168 ~~~ 170 (308)
T 2ond_A 168 HHV 170 (308)
T ss_dssp THH
T ss_pred HHH
Confidence 443
No 256
>1ouv_A Conserved hypothetical secreted protein; TPR repeat, HCP repeat, cysteine rich protein, loop-helix-TU repeat protein, hydrolase; 2.00A {Helicobacter pylori} SCOP: a.118.18.1
Probab=95.36 E-value=0.021 Score=53.10 Aligned_cols=40 Identities=13% Similarity=-0.078 Sum_probs=34.0
Q ss_pred HHHhHhHHHHHHHH----hcCHHHHHHHHHHHHhcCCCCccceeee
Q 011164 447 KVACNLNNAACKLK----LKDYKQAEKLCTKVQQQKKFLLLPIFNI 488 (492)
Q Consensus 447 ~~~l~~N~a~~~lk----~~~~~~ai~~~~~al~~dp~n~KA~~r~ 488 (492)
...++.|++.+|.+ .+++++|+..+.++++++ +..+++++
T Consensus 109 ~~~a~~~lg~~~~~~~~~~~~~~~A~~~~~~a~~~~--~~~a~~~l 152 (273)
T 1ouv_A 109 YAEGCASLGGIYHDGKVVTRDFKKAVEYFTKACDLN--DGDGCTIL 152 (273)
T ss_dssp CHHHHHHHHHHHHHCSSSCCCHHHHHHHHHHHHHTT--CHHHHHHH
T ss_pred CccHHHHHHHHHHcCCCcccCHHHHHHHHHHHHhcC--cHHHHHHH
Confidence 35689999999999 999999999999999986 45666554
No 257
>4b4t_Q 26S proteasome regulatory subunit RPN6; hydrolase, AAA-atpases, protein degradation, ubiquitin-prote pathway; 7.40A {Saccharomyces cerevisiae}
Probab=95.35 E-value=0.017 Score=57.58 Aligned_cols=83 Identities=10% Similarity=0.071 Sum_probs=60.2
Q ss_pred HHHhhhHHHHcccHHHHHHHHHHHHHHhcccCCCCh--HHHHHHHHHHHHhHhHHHHHHHHhcCHHHHHHHHHHHHhcCC
Q 011164 402 KKEQGNTLFKAGKYARASKRYEKAVKYIEYDTSFGD--EEKKQAKALKVACNLNNAACKLKLKDYKQAEKLCTKVQQQKK 479 (492)
Q Consensus 402 ~K~~Gn~~fk~~~~~~A~~~Y~~al~~l~~~~~~~~--~~~~~~~~~~~~l~~N~a~~~lk~~~~~~ai~~~~~al~~dp 479 (492)
.-++|..++++|+|.+|++.|.++++.......... ............++.|++.+|.++|+|++|+....+++.+.+
T Consensus 7 ~l~~a~~l~~~~~y~eA~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~al~~l~~~y~~~~~~~~a~~~~~~~~~~~~ 86 (434)
T 4b4t_Q 7 KLEEARRLVNEKQYNEAEQVYLSLLDKDSSQSSAAAGASVDDKRRNEQETSILELGQLYVTMGAKDKLREFIPHSTEYMM 86 (434)
T ss_dssp HHHHHHHHHHHTCHHHHHHHHHHHHHSCCCSSSBSSSSSBCSHHHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHTHHHHH
T ss_pred HHHHHHHHHHCCCHHHHHHHHHHHHhhCcccchhHHHHHHHHHHhhhHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHH
Confidence 346788899999999999999999986543221100 000112234456789999999999999999999999998876
Q ss_pred CCccc
Q 011164 480 FLLLP 484 (492)
Q Consensus 480 ~n~KA 484 (492)
...++
T Consensus 87 ~~~~~ 91 (434)
T 4b4t_Q 87 QFAKS 91 (434)
T ss_dssp TSCHH
T ss_pred Hccch
Confidence 55443
No 258
>3rjv_A Putative SEL1 repeat protein; alpha-alpha superhelix, structural genomics, joint center FO structural genomics, JCSG; HET: MSE; 1.65A {Klebsiella pneumoniae subsp}
Probab=95.34 E-value=0.018 Score=51.86 Aligned_cols=73 Identities=12% Similarity=-0.033 Sum_probs=51.2
Q ss_pred HHHhhhHHHH----cccHHHHHHHHHHHHHHhcccCCCChHHHHHHHHHHHHhHhHHHHHHHH----hcCHHHHHHHHHH
Q 011164 402 KKEQGNTLFK----AGKYARASKRYEKAVKYIEYDTSFGDEEKKQAKALKVACNLNNAACKLK----LKDYKQAEKLCTK 473 (492)
Q Consensus 402 ~K~~Gn~~fk----~~~~~~A~~~Y~~al~~l~~~~~~~~~~~~~~~~~~~~l~~N~a~~~lk----~~~~~~ai~~~~~ 473 (492)
....|.-++. .+++.+|+..|++|++.-.. .-...+++|++.+|.. .+++++|+..+.+
T Consensus 88 ~~~Lg~~y~~g~g~~~d~~~A~~~~~~A~~~~~~-------------~~~~~a~~~Lg~~y~~g~g~~~d~~~A~~~~~~ 154 (212)
T 3rjv_A 88 EIVLARVLVNRQAGATDVAHAITLLQDAARDSES-------------DAAVDAQMLLGLIYASGVHGPEDDVKASEYFKG 154 (212)
T ss_dssp HHHHHHHHTCGGGSSCCHHHHHHHHHHHTSSTTS-------------HHHHHHHHHHHHHHHHTSSSSCCHHHHHHHHHH
T ss_pred HHHHHHHHHcCCCCccCHHHHHHHHHHHHHcCCC-------------cchHHHHHHHHHHHHcCCCCCCCHHHHHHHHHH
Confidence 3344555554 66777777777777754110 0236788899999999 8899999999999
Q ss_pred HHhcCCCCccceeee
Q 011164 474 VQQQKKFLLLPIFNI 488 (492)
Q Consensus 474 al~~dp~n~KA~~r~ 488 (492)
++++ +++..|+|++
T Consensus 155 A~~~-~~~~~a~~~L 168 (212)
T 3rjv_A 155 SSSL-SRTGYAEYWA 168 (212)
T ss_dssp HHHT-SCTTHHHHHH
T ss_pred HHHc-CCCHHHHHHH
Confidence 9988 5666676654
No 259
>1dce_A Protein (RAB geranylgeranyltransferase alpha subunit); 2.0 A resolution, N-formylmethionine, alpha subunit; HET: FME; 2.00A {Rattus norvegicus} SCOP: a.118.6.1 b.7.4.1 c.10.2.2 PDB: 1ltx_A*
Probab=95.31 E-value=0.014 Score=61.37 Aligned_cols=82 Identities=7% Similarity=-0.103 Sum_probs=64.3
Q ss_pred HHHHHHHHHHHHhhhHHHHcccH-HHHHHHHHHHHHHhcccCCCChHHHHHHHHHHHHhHhHHHHHHHHhcC--------
Q 011164 393 EEKIEAAGKKKEQGNTLFKAGKY-ARASKRYEKAVKYIEYDTSFGDEEKKQAKALKVACNLNNAACKLKLKD-------- 463 (492)
Q Consensus 393 ~e~l~~a~~~K~~Gn~~fk~~~~-~~A~~~Y~~al~~l~~~~~~~~~~~~~~~~~~~~l~~N~a~~~lk~~~-------- 463 (492)
..+++.-..+....-.+.+.+.| ++|+..|.+++.. .+....++++|+.+..++++
T Consensus 22 ~~k~~~y~~~~~~~~~~~~~~~~~eeal~~~~~~l~~---------------nP~~~taW~~R~~~l~~l~~~~~~~~~~ 86 (567)
T 1dce_A 22 EQKLKLYQSATQAVFQKRQAGELDESVLELTSQILGA---------------NPDFATLWNCRREVLQHLETEKSPEESA 86 (567)
T ss_dssp HHHHHHHHHHHHHHHHHHHTTCCSHHHHHHHHHHHHH---------------CTTCHHHHHHHHHHHHHHHTTSCHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHH---------------CchhHHHHHHHHHHHHhcccccchhhhh
Confidence 34444444444555555555555 6789999999987 44458899999999999998
Q ss_pred --HHHHHHHHHHHHhcCCCCccceeeee
Q 011164 464 --YKQAEKLCTKVQQQKKFLLLPIFNIY 489 (492)
Q Consensus 464 --~~~ai~~~~~al~~dp~n~KA~~r~~ 489 (492)
|++++..++++|+.+|+|..||+.+.
T Consensus 87 ~~~~~eL~~~~~~l~~~pK~y~aW~hR~ 114 (567)
T 1dce_A 87 ALVKAELGFLESCLRVNPKSYGTWHHRC 114 (567)
T ss_dssp HHHHHHHHHHHHHHHHCTTCHHHHHHHH
T ss_pred hhHHHHHHHHHHHHHhCCCCHHHHHHHH
Confidence 99999999999999999999987654
No 260
>1na3_A Designed protein CTPR2; de novo protein; HET: IPT; 1.55A {Unidentified} SCOP: k.38.1.1 PDB: 2avp_A
Probab=95.30 E-value=0.011 Score=44.33 Aligned_cols=43 Identities=16% Similarity=0.079 Sum_probs=38.4
Q ss_pred HHHhHhHHHHHHHHhcCHHHHHHHHHHHHhcCCCCccceeeee
Q 011164 447 KVACNLNNAACKLKLKDYKQAEKLCTKVQQQKKFLLLPIFNIY 489 (492)
Q Consensus 447 ~~~l~~N~a~~~lk~~~~~~ai~~~~~al~~dp~n~KA~~r~~ 489 (492)
....+.++|.+++++++|++|+..+.++++++|++..+++++.
T Consensus 8 ~~~~~~~la~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~l~ 50 (91)
T 1na3_A 8 SAEAWYNLGNAYYKQGDYDEAIEYYQKALELDPNNAEAWYNLG 50 (91)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHH
T ss_pred cHHHHHHHHHHHHHccCHHHHHHHHHHHHhcCCCCHHHHHHHH
Confidence 4567899999999999999999999999999999988877653
No 261
>1hz4_A MALT regulatory protein; two-helix bundles, helix repeats, protein superhelix, transc activator; 1.45A {Escherichia coli} SCOP: a.118.8.2
Probab=95.21 E-value=0.061 Score=52.39 Aligned_cols=72 Identities=17% Similarity=0.005 Sum_probs=51.4
Q ss_pred HHHhhhHHHHcccHHHHHHHHHHHHHHhcccCCCChHHHHHHHHHHHHhHhHHHHHHHHhcCHHHHHHHHHHHHhcCCC
Q 011164 402 KKEQGNTLFKAGKYARASKRYEKAVKYIEYDTSFGDEEKKQAKALKVACNLNNAACKLKLKDYKQAEKLCTKVQQQKKF 480 (492)
Q Consensus 402 ~K~~Gn~~fk~~~~~~A~~~Y~~al~~l~~~~~~~~~~~~~~~~~~~~l~~N~a~~~lk~~~~~~ai~~~~~al~~dp~ 480 (492)
+...|..++..|+|.+|+..|++++.......... ......++.|++.++..+|+|++|+..+.+++++.+.
T Consensus 96 ~~~la~~~~~~G~~~~A~~~~~~al~~~~~~~~~~-------~~~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~~~ 167 (373)
T 1hz4_A 96 LIQQSEILFAQGFLQTAWETQEKAFQLINEQHLEQ-------LPMHEFLVRIRAQLLWAWARLDEAEASARSGIEVLSS 167 (373)
T ss_dssp HHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCTT-------STHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHTTT
T ss_pred HHHHHHHHHHCCCHHHHHHHHHHHHHHHHHhcccc-------CcHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHhhc
Confidence 45567778888999999999999988754321110 0234566778888888888888888888888877664
No 262
>4f3v_A ESX-1 secretion system protein ECCA1; tetratricopeptide repeat, TPR domain, ATPase, protein secret protein transport; 2.00A {Mycobacterium tuberculosis}
Probab=95.16 E-value=0.036 Score=52.37 Aligned_cols=69 Identities=13% Similarity=-0.020 Sum_probs=47.6
Q ss_pred HHHhhhHHHHcccHHHHHHHHHHHHHHhcccCCCChHHHHHHHHH-HHHhHhHHHHHHHHhcCHHHHHHHHHHHHhcCCC
Q 011164 402 KKEQGNTLFKAGKYARASKRYEKAVKYIEYDTSFGDEEKKQAKAL-KVACNLNNAACKLKLKDYKQAEKLCTKVQQQKKF 480 (492)
Q Consensus 402 ~K~~Gn~~fk~~~~~~A~~~Y~~al~~l~~~~~~~~~~~~~~~~~-~~~l~~N~a~~~lk~~~~~~ai~~~~~al~~dp~ 480 (492)
.-..|..+-+.|++.+|+..|++++.- .. .+. ......|++.|+.++|+.++|+..+++++..+|+
T Consensus 174 ~~~LG~al~~LG~~~eAl~~l~~a~~g-~~------------~P~~~~da~~~~glaL~~lGr~deA~~~l~~a~a~~P~ 240 (282)
T 4f3v_A 174 GVAHGVAAANLALFTEAERRLTEANDS-PA------------GEACARAIAWYLAMARRSQGNESAAVALLEWLQTTHPE 240 (282)
T ss_dssp HHHHHHHHHHTTCHHHHHHHHHHHHTS-TT------------TTTTHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHSCC
T ss_pred HHHHHHHHHHCCCHHHHHHHHHHHhcC-CC------------CccccHHHHHHHHHHHHHcCCHHHHHHHHHHHHhcCCc
Confidence 344566666667777777777766631 00 001 4567788999999999999999999999999887
Q ss_pred Cccc
Q 011164 481 LLLP 484 (492)
Q Consensus 481 n~KA 484 (492)
.++
T Consensus 241 -~~~ 243 (282)
T 4f3v_A 241 -PKV 243 (282)
T ss_dssp -HHH
T ss_pred -HHH
Confidence 543
No 263
>3rjv_A Putative SEL1 repeat protein; alpha-alpha superhelix, structural genomics, joint center FO structural genomics, JCSG; HET: MSE; 1.65A {Klebsiella pneumoniae subsp}
Probab=95.14 E-value=0.022 Score=51.28 Aligned_cols=90 Identities=13% Similarity=0.045 Sum_probs=60.1
Q ss_pred HHHHHHhhhHHHHcccHHHHHHHHHHHHHHhcc---------cCCC----ChHHH-----HHHHHHHHHhHhHHHHHHHH
Q 011164 399 AGKKKEQGNTLFKAGKYARASKRYEKAVKYIEY---------DTSF----GDEEK-----KQAKALKVACNLNNAACKLK 460 (492)
Q Consensus 399 a~~~K~~Gn~~fk~~~~~~A~~~Y~~al~~l~~---------~~~~----~~~~~-----~~~~~~~~~l~~N~a~~~lk 460 (492)
+..+...|..++..+++.+|+..|+++++.-.. .... +.+.- ...+.-....++|++.+|..
T Consensus 18 ~~a~~~lg~~~~~~~~~~~A~~~~~~a~~~g~~~a~~~lg~~y~~~g~~~~~~~A~~~~~~A~~~g~~~a~~~Lg~~y~~ 97 (212)
T 3rjv_A 18 RRAQYYLADTWVSSGDYQKAEYWAQKAAAQGDGDALALLAQLKIRNPQQADYPQARQLAEKAVEAGSKSGEIVLARVLVN 97 (212)
T ss_dssp HHHHHHHHHHHHHHTCHHHHHHHHHHHHHTTCHHHHHHHHHHTTSSTTSCCHHHHHHHHHHHHHTTCHHHHHHHHHHHTC
T ss_pred HHHHHHHHHHHhcCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHcCCCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHc
Confidence 445667888888899999999999998864210 0000 11110 12223345577888888888
Q ss_pred ----hcCHHHHHHHHHHHHhcCC--CCccceeee
Q 011164 461 ----LKDYKQAEKLCTKVQQQKK--FLLLPIFNI 488 (492)
Q Consensus 461 ----~~~~~~ai~~~~~al~~dp--~n~KA~~r~ 488 (492)
.+++.+|+..+.++++.++ +++.|++++
T Consensus 98 g~g~~~d~~~A~~~~~~A~~~~~~~~~~~a~~~L 131 (212)
T 3rjv_A 98 RQAGATDVAHAITLLQDAARDSESDAAVDAQMLL 131 (212)
T ss_dssp GGGSSCCHHHHHHHHHHHTSSTTSHHHHHHHHHH
T ss_pred CCCCccCHHHHHHHHHHHHHcCCCcchHHHHHHH
Confidence 8888888888888888876 347777654
No 264
>4f3v_A ESX-1 secretion system protein ECCA1; tetratricopeptide repeat, TPR domain, ATPase, protein secret protein transport; 2.00A {Mycobacterium tuberculosis}
Probab=95.01 E-value=0.016 Score=54.88 Aligned_cols=78 Identities=13% Similarity=0.082 Sum_probs=58.9
Q ss_pred HHHHhhhHHHHcccHHHHHHHHHHHHHHhcccCCCChHHHHHHHHHHHHhHhHHHHHHHHhcCHHHHHHHHHHHHhcC--
Q 011164 401 KKKEQGNTLFKAGKYARASKRYEKAVKYIEYDTSFGDEEKKQAKALKVACNLNNAACKLKLKDYKQAEKLCTKVQQQK-- 478 (492)
Q Consensus 401 ~~K~~Gn~~fk~~~~~~A~~~Y~~al~~l~~~~~~~~~~~~~~~~~~~~l~~N~a~~~lk~~~~~~ai~~~~~al~~d-- 478 (492)
.....|..+++.++|.+|+..++++++.-. ......++.|++.++..+|+|++|+..+.+|+...
T Consensus 137 ~~~~~a~l~~~~~r~~dA~~~l~~a~~~~d-------------~~~~~~a~~~LG~al~~LG~~~eAl~~l~~a~~g~~~ 203 (282)
T 4f3v_A 137 VAWMKAVVYGAAERWTDVIDQVKSAGKWPD-------------KFLAGAAGVAHGVAAANLALFTEAERRLTEANDSPAG 203 (282)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHTTGGGCSC-------------HHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHTSTTT
T ss_pred HHHHHHHHHHHcCCHHHHHHHHHHhhccCC-------------cccHHHHHHHHHHHHHHCCCHHHHHHHHHHHhcCCCC
Confidence 456777888999999999999986655310 11345689999999999999999999999998654
Q ss_pred CC-Cccceeeeecc
Q 011164 479 KF-LLLPIFNIYAR 491 (492)
Q Consensus 479 p~-n~KA~~r~~~~ 491 (492)
|. ...|+|++.+.
T Consensus 204 P~~~~da~~~~gla 217 (282)
T 4f3v_A 204 EACARAIAWYLAMA 217 (282)
T ss_dssp TTTHHHHHHHHHHH
T ss_pred ccccHHHHHHHHHH
Confidence 44 45576665543
No 265
>1klx_A Cysteine rich protein B; structural genomics, helix-turn-helix, right handed super helix, modular structure', hydrolase; 1.95A {Helicobacter pylori} SCOP: a.118.18.1
Probab=94.95 E-value=0.065 Score=44.52 Aligned_cols=69 Identities=17% Similarity=-0.023 Sum_probs=53.1
Q ss_pred HHHHHhhhHHHH----cccHHHHHHHHHHHHHHhcccCCCChHHHHHHHHHHHHhHhHHHHHHHH----hcCHHHHHHHH
Q 011164 400 GKKKEQGNTLFK----AGKYARASKRYEKAVKYIEYDTSFGDEEKKQAKALKVACNLNNAACKLK----LKDYKQAEKLC 471 (492)
Q Consensus 400 ~~~K~~Gn~~fk----~~~~~~A~~~Y~~al~~l~~~~~~~~~~~~~~~~~~~~l~~N~a~~~lk----~~~~~~ai~~~ 471 (492)
......|.-++. .+++.+|+..|++|.+. -....+.|++.+|.. .+++++|+..+
T Consensus 58 ~a~~~Lg~~y~~G~g~~~d~~~A~~~~~~Aa~~-----------------g~~~a~~~Lg~~y~~G~g~~~d~~~A~~~~ 120 (138)
T 1klx_A 58 NGCRFLGDFYENGKYVKKDLRKAAQYYSKACGL-----------------NDQDGCLILGYKQYAGKGVVKNEKQAVKTF 120 (138)
T ss_dssp HHHHHHHHHHHHCSSSCCCHHHHHHHHHHHHHT-----------------TCHHHHHHHHHHHHHTSSSCCCHHHHHHHH
T ss_pred HHHHHHHHHHHcCCCCCccHHHHHHHHHHHHcC-----------------CCHHHHHHHHHHHHCCCCCCcCHHHHHHHH
Confidence 344556666666 78899999999998864 125678899999999 89999999999
Q ss_pred HHHHhcCCCCccceee
Q 011164 472 TKVQQQKKFLLLPIFN 487 (492)
Q Consensus 472 ~~al~~dp~n~KA~~r 487 (492)
.+|.+.. +..|.++
T Consensus 121 ~~Aa~~g--~~~A~~~ 134 (138)
T 1klx_A 121 EKACRLG--SEDACGI 134 (138)
T ss_dssp HHHHHTT--CHHHHHH
T ss_pred HHHHHCC--CHHHHHH
Confidence 9999873 4555443
No 266
>1hz4_A MALT regulatory protein; two-helix bundles, helix repeats, protein superhelix, transc activator; 1.45A {Escherichia coli} SCOP: a.118.8.2
Probab=94.64 E-value=0.12 Score=50.19 Aligned_cols=73 Identities=10% Similarity=-0.024 Sum_probs=57.9
Q ss_pred HHHHHHHhhhHHHHcccHHHHHHHHHHHHHHhcccCCCChHHHHHHHHHHHHhHhHHHHHHHHhcCHHHHHHHHHHHHhc
Q 011164 398 AAGKKKEQGNTLFKAGKYARASKRYEKAVKYIEYDTSFGDEEKKQAKALKVACNLNNAACKLKLKDYKQAEKLCTKVQQQ 477 (492)
Q Consensus 398 ~a~~~K~~Gn~~fk~~~~~~A~~~Y~~al~~l~~~~~~~~~~~~~~~~~~~~l~~N~a~~~lk~~~~~~ai~~~~~al~~ 477 (492)
.+..+...|..++..|+|.+|...|++++........ ......+++|++.++..+|+|.+|+..+.+++++
T Consensus 52 ~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~~~~~---------~~~~~~~~~~la~~~~~~G~~~~A~~~~~~al~~ 122 (373)
T 1hz4_A 52 RIVATSVLGEVLHCKGELTRSLALMQQTEQMARQHDV---------WHYALWSLIQQSEILFAQGFLQTAWETQEKAFQL 122 (373)
T ss_dssp HHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHTTC---------HHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhcCcHHHHHHHHHHHHHHHHhcCc---------HHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHH
Confidence 3445667788888899999999999999987543211 2234667899999999999999999999999987
Q ss_pred CC
Q 011164 478 KK 479 (492)
Q Consensus 478 dp 479 (492)
.+
T Consensus 123 ~~ 124 (373)
T 1hz4_A 123 IN 124 (373)
T ss_dssp HH
T ss_pred HH
Confidence 53
No 267
>3dra_A Protein farnesyltransferase/geranylgeranyltransferase type-1 subunit alpha; geranylgeranyltrasferase, ggtase, ggtase-I, PGGT, prenyltransferase, farnesyltransferase; HET: B3P GRG; 1.80A {Candida albicans}
Probab=94.56 E-value=0.029 Score=53.94 Aligned_cols=63 Identities=14% Similarity=0.032 Sum_probs=54.2
Q ss_pred HcccH-HHHHHHHHHHHHHhcccCCCChHHHHHHHHHHHHhHhHHHHHHHHhc--CHHHHHHHHHHHHhcCCCCccceee
Q 011164 411 KAGKY-ARASKRYEKAVKYIEYDTSFGDEEKKQAKALKVACNLNNAACKLKLK--DYKQAEKLCTKVQQQKKFLLLPIFN 487 (492)
Q Consensus 411 k~~~~-~~A~~~Y~~al~~l~~~~~~~~~~~~~~~~~~~~l~~N~a~~~lk~~--~~~~ai~~~~~al~~dp~n~KA~~r 487 (492)
+++.| ++|+..+.++|.+ .+-..+++++++.+...++ ++++++..++++|.++|+|..||+.
T Consensus 44 ~~~e~s~~aL~~t~~~L~~---------------nP~~~taWn~R~~~L~~l~~~~~~eeL~~~~~~L~~nPk~y~aW~~ 108 (306)
T 3dra_A 44 KAEEYSERALHITELGINE---------------LASHYTIWIYRFNILKNLPNRNLYDELDWCEEIALDNEKNYQIWNY 108 (306)
T ss_dssp HTTCCSHHHHHHHHHHHHH---------------CTTCHHHHHHHHHHHHTCTTSCHHHHHHHHHHHHHHCTTCCHHHHH
T ss_pred HcCCCCHHHHHHHHHHHHH---------------CcHHHHHHHHHHHHHHHcccccHHHHHHHHHHHHHHCcccHHHHHH
Confidence 33444 6999999999987 4445889999999999999 9999999999999999999988765
Q ss_pred e
Q 011164 488 I 488 (492)
Q Consensus 488 ~ 488 (492)
+
T Consensus 109 R 109 (306)
T 3dra_A 109 R 109 (306)
T ss_dssp H
T ss_pred H
Confidence 4
No 268
>3ffl_A Anaphase-promoting complex subunit 7; tetratricopeptide repeat motif, helis-turn-helix, cell cycle division, mitosis, TPR repeat; 2.50A {Homo sapiens}
Probab=94.56 E-value=0.2 Score=42.88 Aligned_cols=71 Identities=15% Similarity=0.088 Sum_probs=60.2
Q ss_pred HHHHhhhHHHHcccHHHHHHHHHHHHHHhcccCCC-ChHHHHHHHHHHHHhHhHHHHHHHHhcCHHHHHHHHHHHHhcC
Q 011164 401 KKKEQGNTLFKAGKYARASKRYEKAVKYIEYDTSF-GDEEKKQAKALKVACNLNNAACKLKLKDYKQAEKLCTKVQQQK 478 (492)
Q Consensus 401 ~~K~~Gn~~fk~~~~~~A~~~Y~~al~~l~~~~~~-~~~~~~~~~~~~~~l~~N~a~~~lk~~~~~~ai~~~~~al~~d 478 (492)
.+.++...++..+.|..|+..+..++.+.+.+... + -..+..++..+|.++++.++|..|...+.+||.+-
T Consensus 22 ~l~dqik~L~d~~LY~sA~~La~lLlSl~~~~~~~~s-------p~~~~~~l~~ladalf~~~eyrrA~~~y~qALq~~ 93 (167)
T 3ffl_A 22 NVIDHVRDMAAAGLHSNVRLLSSLLLTLSNNNPELFS-------PPQKYQLLVYHADSLFHDKEYRNAVSKYTMALQQK 93 (167)
T ss_dssp CHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHSTTSSC-------HHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhhhHHHHHHHHHHHHHhhcCCccccc-------HHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHH
Confidence 46788889999999999999999999887554332 2 45678889999999999999999999999998763
No 269
>2v6y_A AAA family ATPase, P60 katanin; MIT, VPS4, archaea, AAA-ATPase, ATP-binding, microtubule INT and trafficking domain, nucleotide-binding; HET: SRT; 2.40A {Sulfolobus solfataricus} PDB: 2v6y_B*
Probab=94.45 E-value=0.079 Score=39.98 Aligned_cols=42 Identities=24% Similarity=0.184 Sum_probs=36.4
Q ss_pred CChHH-HHHHHHHHHHhhhHHHHcccHHHHHHHHHHHHHHhcc
Q 011164 390 MNTEE-KIEAAGKKKEQGNTLFKAGKYARASKRYEKAVKYIEY 431 (492)
Q Consensus 390 ~~~~e-~l~~a~~~K~~Gn~~fk~~~~~~A~~~Y~~al~~l~~ 431 (492)
|+..+ .++.|..+-.+|.++=+.|+|.+|+.+|..|+.++..
T Consensus 1 M~~~~~~~~~Ai~lv~~Ave~D~~g~y~eAl~lY~~aie~l~~ 43 (83)
T 2v6y_A 1 MSAQVMLEDMARKYAILAVKADKEGKVEDAITYYKKAIEVLSQ 43 (83)
T ss_dssp CCHHHHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHH
T ss_pred CCchHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHH
Confidence 44555 6788999999999999999999999999999998753
No 270
>4b4t_Q 26S proteasome regulatory subunit RPN6; hydrolase, AAA-atpases, protein degradation, ubiquitin-prote pathway; 7.40A {Saccharomyces cerevisiae}
Probab=94.39 E-value=0.11 Score=51.66 Aligned_cols=72 Identities=10% Similarity=0.088 Sum_probs=59.4
Q ss_pred HHHHHHhhhHHHHcccHHHHHHHHHHHHHHhcccCCCChHHHHHHHHHHHHhHhHHHHHHHHhcCHHHHHHHHHHHHhcC
Q 011164 399 AGKKKEQGNTLFKAGKYARASKRYEKAVKYIEYDTSFGDEEKKQAKALKVACNLNNAACKLKLKDYKQAEKLCTKVQQQK 478 (492)
Q Consensus 399 a~~~K~~Gn~~fk~~~~~~A~~~Y~~al~~l~~~~~~~~~~~~~~~~~~~~l~~N~a~~~lk~~~~~~ai~~~~~al~~d 478 (492)
+......|+-++..|+|.+|+..|++++..+....+ ......+++|++.+|+.+++|.+|...+++++.+.
T Consensus 135 ~~~~~~la~~~~~~g~~~~A~~~l~~~~~~~~~~~~---------~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~~~ 205 (434)
T 4b4t_Q 135 HSLSIKLATLHYQKKQYKDSLALINDLLREFKKLDD---------KPSLVDVHLLESKVYHKLRNLAKSKASLTAARTAA 205 (434)
T ss_dssp HHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHTTSSC---------STHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHccChHHHHHHHHHHHHHHHhccc---------chhHHHHHHHHHHHHHHhCcHHHHHHHHHHHHHHh
Confidence 334557788999999999999999999987654332 23457889999999999999999999999998875
Q ss_pred C
Q 011164 479 K 479 (492)
Q Consensus 479 p 479 (492)
+
T Consensus 206 ~ 206 (434)
T 4b4t_Q 206 N 206 (434)
T ss_dssp H
T ss_pred h
Confidence 3
No 271
>3dra_A Protein farnesyltransferase/geranylgeranyltransferase type-1 subunit alpha; geranylgeranyltrasferase, ggtase, ggtase-I, PGGT, prenyltransferase, farnesyltransferase; HET: B3P GRG; 1.80A {Candida albicans}
Probab=94.03 E-value=0.04 Score=52.91 Aligned_cols=75 Identities=5% Similarity=-0.306 Sum_probs=59.6
Q ss_pred HHHHHHhhhHHHHcc--cHHHHHHHHHHHHHHhcccCCCChHHHHHHHHHHHHhHhHHHHHH----HHh---cCHHHHHH
Q 011164 399 AGKKKEQGNTLFKAG--KYARASKRYEKAVKYIEYDTSFGDEEKKQAKALKVACNLNNAACK----LKL---KDYKQAEK 469 (492)
Q Consensus 399 a~~~K~~Gn~~fk~~--~~~~A~~~Y~~al~~l~~~~~~~~~~~~~~~~~~~~l~~N~a~~~----lk~---~~~~~ai~ 469 (492)
...+.-+|..+...+ ++.+|+..+.++|.. .+-...++++|..+. .++ +++.+++.
T Consensus 67 ~taWn~R~~~L~~l~~~~~~eeL~~~~~~L~~---------------nPk~y~aW~~R~~iL~~~~~~l~~~~~~~~EL~ 131 (306)
T 3dra_A 67 YTIWIYRFNILKNLPNRNLYDELDWCEEIALD---------------NEKNYQIWNYRQLIIGQIMELNNNDFDPYREFD 131 (306)
T ss_dssp HHHHHHHHHHHHTCTTSCHHHHHHHHHHHHHH---------------CTTCCHHHHHHHHHHHHHHHHTTTCCCTHHHHH
T ss_pred HHHHHHHHHHHHHcccccHHHHHHHHHHHHHH---------------CcccHHHHHHHHHHHHHHHHhccccCCHHHHHH
Confidence 344567777777777 999999999999976 223367788888888 666 78999999
Q ss_pred HHHHHHhcCCCCccceeee
Q 011164 470 LCTKVQQQKKFLLLPIFNI 488 (492)
Q Consensus 470 ~~~~al~~dp~n~KA~~r~ 488 (492)
.|+++|+.+|+|.-||+.+
T Consensus 132 ~~~~~l~~~pkny~aW~~R 150 (306)
T 3dra_A 132 ILEAMLSSDPKNHHVWSYR 150 (306)
T ss_dssp HHHHHHHHCTTCHHHHHHH
T ss_pred HHHHHHHhCCCCHHHHHHH
Confidence 9999999999998887644
No 272
>2kc7_A BFR218_protein; tetratricopeptide repeat, all-alpha, GFT-structural genomics, PSI-2, protein structure initiative; NMR {Bacteroides fragilis}
Probab=93.81 E-value=0.018 Score=44.27 Aligned_cols=39 Identities=10% Similarity=-0.018 Sum_probs=35.0
Q ss_pred HhHHHHHHHHhcCHHHHHHHHHHHHhcCCCCcc-ceeeee
Q 011164 451 NLNNAACKLKLKDYKQAEKLCTKVQQQKKFLLL-PIFNIY 489 (492)
Q Consensus 451 ~~N~a~~~lk~~~~~~ai~~~~~al~~dp~n~K-A~~r~~ 489 (492)
..++|.++++.++|++|+..++++++++|++.. +++++.
T Consensus 3 ~~~~a~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~~lg 42 (99)
T 2kc7_A 3 QLKTIKELINQGDIENALQALEEFLQTEPVGKDEAYYLMG 42 (99)
T ss_dssp THHHHHHHHHHTCHHHHHHHHHHHHHHCSSTHHHHHHHHH
T ss_pred HHHHHHHHHHcCCHHHHHHHHHHHHHHCCCcHHHHHHHHH
Confidence 368999999999999999999999999999988 877653
No 273
>1xi4_A Clathrin heavy chain; alpha-ZIG-ZAG, beta-propeller, endocytosis-exocyto complex; 7.90A {Bos taurus} SCOP: i.23.1.1 PDB: 1xi5_A 3iyv_A
Probab=93.37 E-value=0.071 Score=60.74 Aligned_cols=13 Identities=31% Similarity=0.391 Sum_probs=8.5
Q ss_pred CCccEEEEEEecC
Q 011164 268 DDKKVIKKILKEG 280 (492)
Q Consensus 268 ~d~~v~k~il~~G 280 (492)
..-|+++-+.+-|
T Consensus 268 ~k~g~iy~itk~G 280 (1630)
T 1xi4_A 268 EKHDVVFLITKYG 280 (1630)
T ss_pred cccCEEEEEecCc
Confidence 3446777777766
No 274
>1b89_A Protein (clathrin heavy chain); triskelion, coated vesicles, endocytosis, SELF- assembly, alpha-alpha superhelix; 2.60A {Bos taurus} SCOP: a.118.1.3
Probab=93.09 E-value=0.034 Score=55.95 Aligned_cols=51 Identities=18% Similarity=0.214 Sum_probs=32.3
Q ss_pred HHHHhhhHHHHcccHHHHHHHHHHHHHHhcccCCCChHHHHHHHHHHHHhHhHHHHHHHHhcCHHHHHHHHHHH
Q 011164 401 KKKEQGNTLFKAGKYARASKRYEKAVKYIEYDTSFGDEEKKQAKALKVACNLNNAACKLKLKDYKQAEKLCTKV 474 (492)
Q Consensus 401 ~~K~~Gn~~fk~~~~~~A~~~Y~~al~~l~~~~~~~~~~~~~~~~~~~~l~~N~a~~~lk~~~~~~ai~~~~~a 474 (492)
.+...|+.+|.+|+|++|...|+++ .-|.++|.|+.++|+|++|++.+.++
T Consensus 124 a~~~IGd~~~~~g~yeeA~~~Y~~a-----------------------~n~~~LA~~L~~Lg~yq~AVea~~KA 174 (449)
T 1b89_A 124 HIQQVGDRCYDEKMYDAAKLLYNNV-----------------------SNFGRLASTLVHLGEYQAAVDGARKA 174 (449)
T ss_dssp -------------CTTTHHHHHHHT-----------------------TCHHHHHHHHHTTTCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHcCCHHHHHHHHHHh-----------------------hhHHHHHHHHHHhccHHHHHHHHHHc
Confidence 7788999999999999999999866 24677888888888888888888888
No 275
>1klx_A Cysteine rich protein B; structural genomics, helix-turn-helix, right handed super helix, modular structure', hydrolase; 1.95A {Helicobacter pylori} SCOP: a.118.18.1
Probab=93.02 E-value=0.11 Score=43.07 Aligned_cols=65 Identities=9% Similarity=-0.169 Sum_probs=52.1
Q ss_pred hhhHHHHcccHHHHHHHHHHHHHHhcccCCCChHHHHHHHHHHHHhHhHHHHHHHH----hcCHHHHHHHHHHHHhcCCC
Q 011164 405 QGNTLFKAGKYARASKRYEKAVKYIEYDTSFGDEEKKQAKALKVACNLNNAACKLK----LKDYKQAEKLCTKVQQQKKF 480 (492)
Q Consensus 405 ~Gn~~fk~~~~~~A~~~Y~~al~~l~~~~~~~~~~~~~~~~~~~~l~~N~a~~~lk----~~~~~~ai~~~~~al~~dp~ 480 (492)
.|.-++..+.+.+|+..|++|.+. -....++|++.+|.. .+++.+|+..+.+|.+. .
T Consensus 31 lg~~y~~g~~~~~A~~~~~~Aa~~-----------------g~~~a~~~Lg~~y~~G~g~~~d~~~A~~~~~~Aa~~--g 91 (138)
T 1klx_A 31 LSLVSNSQINKQKLFQYLSKACEL-----------------NSGNGCRFLGDFYENGKYVKKDLRKAAQYYSKACGL--N 91 (138)
T ss_dssp HHHHTCTTSCHHHHHHHHHHHHHT-----------------TCHHHHHHHHHHHHHCSSSCCCHHHHHHHHHHHHHT--T
T ss_pred HHHHHHcCCCHHHHHHHHHHHHcC-----------------CCHHHHHHHHHHHHcCCCCCccHHHHHHHHHHHHcC--C
Confidence 455556667778899999998864 126788999999999 89999999999999987 5
Q ss_pred Cccceeee
Q 011164 481 LLLPIFNI 488 (492)
Q Consensus 481 n~KA~~r~ 488 (492)
++.|++++
T Consensus 92 ~~~a~~~L 99 (138)
T 1klx_A 92 DQDGCLIL 99 (138)
T ss_dssp CHHHHHHH
T ss_pred CHHHHHHH
Confidence 67776654
No 276
>3q7a_A Farnesyltransferase alpha subunit; protein prenyltransferase, transferase-transferase inhibitor; HET: SUC 3FX FPP 778; 2.00A {Cryptococcus neoformans} PDB: 3q73_A* 3q78_A* 3q79_A* 3q75_A* 3q7f_A* 3sfx_A* 3sfy_A*
Probab=93.02 E-value=0.073 Score=51.97 Aligned_cols=40 Identities=3% Similarity=-0.267 Sum_probs=27.0
Q ss_pred HHhHhHHHHHHHHh-c-CHHHHHHHHHHHHhcCCCCccceee
Q 011164 448 VACNLNNAACKLKL-K-DYKQAEKLCTKVQQQKKFLLLPIFN 487 (492)
Q Consensus 448 ~~l~~N~a~~~lk~-~-~~~~ai~~~~~al~~dp~n~KA~~r 487 (492)
..++++|..|..++ + ++.+++..|+++|+.||+|.-||+.
T Consensus 123 y~aW~hR~wlL~~l~~~~~~~EL~~~~k~L~~dpkNy~AW~~ 164 (349)
T 3q7a_A 123 YQVWHHRLLLLDRISPQDPVSEIEYIHGSLLPDPKNYHTWAY 164 (349)
T ss_dssp HHHHHHHHHHHHHHCCSCCHHHHHHHHHHTSSCTTCHHHHHH
T ss_pred HHHHHHHHHHHHHhcCCChHHHHHHHHHHHHhCCCCHHHHHH
Confidence 55666777777666 5 6777777777777777777666543
No 277
>2ff4_A Probable regulatory protein EMBR; winged-helix, tetratricopeptide repeat, beta-sandwich, trans; HET: DNA TPO; 1.90A {Mycobacterium tuberculosis} SCOP: a.4.6.1 a.118.8.3 b.26.1.2 PDB: 2fez_A*
Probab=93.00 E-value=0.22 Score=49.44 Aligned_cols=89 Identities=12% Similarity=0.032 Sum_probs=71.3
Q ss_pred HHHHHHhhhHHHHcccHHHHHHHHHHHHHHhccc-------CCCChHHHHHHHHHHHHhHhHHHHHHHHhcCHHHHHHHH
Q 011164 399 AGKKKEQGNTLFKAGKYARASKRYEKAVKYIEYD-------TSFGDEEKKQAKALKVACNLNNAACKLKLKDYKQAEKLC 471 (492)
Q Consensus 399 a~~~K~~Gn~~fk~~~~~~A~~~Y~~al~~l~~~-------~~~~~~~~~~~~~~~~~l~~N~a~~~lk~~~~~~ai~~~ 471 (492)
..++-.+|......++...|...|.+|+.+..-. ..+-......+.+.+..+..-++.+++.++++.+|+..+
T Consensus 115 f~~l~~~~~~~~~~~~~~~a~~~l~~Al~L~rG~~L~~~~~~~w~~~~r~~l~~~~~~a~~~~~~~~l~~g~~~~a~~~l 194 (388)
T 2ff4_A 115 FVAEKTAGVHAAAAGRFEQASRHLSAALREWRGPVLDDLRDFQFVEPFATALVEDKVLAHTAKAEAEIACGRASAVIAEL 194 (388)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHTTCCSSTTGGGTTSTTHHHHHHHHHHHHHHHHHHHHHHHHHTTCHHHHHHHH
T ss_pred HHHHHHHHHHHHhCCCHHHHHHHHHHHHHhcCCCCCCCCCchhHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHH
Confidence 3455566677777899999999999999876432 122335667888999999999999999999999999999
Q ss_pred HHHHhcCCCCccceee
Q 011164 472 TKVQQQKKFLLLPIFN 487 (492)
Q Consensus 472 ~~al~~dp~n~KA~~r 487 (492)
..++..+|-+..++..
T Consensus 195 ~~~~~~~P~~E~~~~~ 210 (388)
T 2ff4_A 195 EALTFEHPYREPLWTQ 210 (388)
T ss_dssp HHHHHHSTTCHHHHHH
T ss_pred HHHHHhCCCCHHHHHH
Confidence 9999999988765543
No 278
>2cpt_A SKD1 protein, vacuolar sorting protein 4B; MIT, helix bundle, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: a.7.14.1
Probab=92.66 E-value=0.56 Score=37.76 Aligned_cols=44 Identities=25% Similarity=0.307 Sum_probs=37.6
Q ss_pred CCCChH-HHHHHHHHHHHhhhHHHHcccHHHHHHHHHHHHHHhcc
Q 011164 388 WDMNTE-EKIEAAGKKKEQGNTLFKAGKYARASKRYEKAVKYIEY 431 (492)
Q Consensus 388 ~~~~~~-e~l~~a~~~K~~Gn~~fk~~~~~~A~~~Y~~al~~l~~ 431 (492)
..|+.. +.++.|..+-.+|..+=+.++|.+|+.+|..|+.+|..
T Consensus 6 ~~m~~~~~~l~kAi~lv~~Ave~D~ag~y~eAl~lY~~Aie~l~~ 50 (117)
T 2cpt_A 6 SGMSSTSPNLQKAIDLASKAAQEDKAGNYEEALQLYQHAVQYFLH 50 (117)
T ss_dssp CCSCCCCHHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHH
T ss_pred ccCCccHHHHHHHHHHHHHHHHHHHccCHHHHHHHHHHHHHHHHH
Confidence 455555 67888999999999999999999999999999998754
No 279
>2xm6_A Protein corresponding to locus C5321 from CFT073 strain; unknown function, SEL1-like repeats; 1.68A {Escherichia coli}
Probab=92.46 E-value=0.15 Score=51.97 Aligned_cols=40 Identities=13% Similarity=-0.041 Sum_probs=33.1
Q ss_pred HHhHhHHHHHHHH----hcCHHHHHHHHHHHHhcCCC---Cccceee
Q 011164 448 VACNLNNAACKLK----LKDYKQAEKLCTKVQQQKKF---LLLPIFN 487 (492)
Q Consensus 448 ~~l~~N~a~~~lk----~~~~~~ai~~~~~al~~dp~---n~KA~~r 487 (492)
..++.|++.+|.+ .+++.+|+..+++|++.+|+ +..|+++
T Consensus 399 ~~a~~~Lg~~y~~g~g~~~d~~~A~~~~~~A~~~~~~~~~~~~a~~~ 445 (490)
T 2xm6_A 399 SAAQVQLGEIYYYGLGVERDYVQAWAWFDTASTNDMNLFGTENRNIT 445 (490)
T ss_dssp HHHHHHHHHHHHHTSSSCCCHHHHHHHHHHHHHHHCCHHHHHHHHHH
T ss_pred HHHHHHHHHHHHcCCCCCCCHHHHHHHHHHHHHCCCCCcCCHHHHHH
Confidence 5678899999999 89999999999999999854 6666543
No 280
>3dss_A Geranylgeranyl transferase type-2 subunit alpha; protein prenylation, metal-binding, prenyltransferase, zinc, phosphoprotein; 1.80A {Rattus norvegicus} PDB: 3dst_A* 3dsu_A* 3dsv_A* 3dsw_A* 3dsx_A* 3hxb_A* 3hxc_A* 3hxd_A* 3hxe_A* 3hxf_A* 3pz1_A* 3pz2_A* 3pz3_A* 3c72_A* 4gtv_A* 4gts_A* 4ehm_A* 4gtt_A*
Probab=92.31 E-value=0.1 Score=50.65 Aligned_cols=43 Identities=2% Similarity=-0.187 Sum_probs=29.4
Q ss_pred HHHHhHhHHHHHHHHhcC-HHHHHHHHHHHHhcCCCCccceeee
Q 011164 446 LKVACNLNNAACKLKLKD-YKQAEKLCTKVQQQKKFLLLPIFNI 488 (492)
Q Consensus 446 ~~~~l~~N~a~~~lk~~~-~~~ai~~~~~al~~dp~n~KA~~r~ 488 (492)
-...+++++..+..+++. +++++.+++++++.+|+|..||+.+
T Consensus 142 rNy~AW~~R~~vl~~l~~~~~eel~~~~~~I~~~p~N~SAW~~R 185 (331)
T 3dss_A 142 RNFHCWDYRRFVAAQAAVAPAEELAFTDSLITRNFSNYSSWHYR 185 (331)
T ss_dssp TCHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHCSCCHHHHHHH
T ss_pred CCHHHHHHHHHHHHHhCcCHHHHHHHHHHHHHHCCCCHHHHHHH
Confidence 345667777777777776 5777777777777777777666543
No 281
>3dss_A Geranylgeranyl transferase type-2 subunit alpha; protein prenylation, metal-binding, prenyltransferase, zinc, phosphoprotein; 1.80A {Rattus norvegicus} PDB: 3dst_A* 3dsu_A* 3dsv_A* 3dsw_A* 3dsx_A* 3hxb_A* 3hxc_A* 3hxd_A* 3hxe_A* 3hxf_A* 3pz1_A* 3pz2_A* 3pz3_A* 3c72_A* 4gtv_A* 4gts_A* 4ehm_A* 4gtt_A*
Probab=92.24 E-value=0.085 Score=51.13 Aligned_cols=64 Identities=6% Similarity=-0.137 Sum_probs=50.7
Q ss_pred HHcccHH-HHHHHHHHHHHHhcccCCCChHHHHHHHHHHHHhHhHHHHHHHHhcC----------HHHHHHHHHHHHhcC
Q 011164 410 FKAGKYA-RASKRYEKAVKYIEYDTSFGDEEKKQAKALKVACNLNNAACKLKLKD----------YKQAEKLCTKVQQQK 478 (492)
Q Consensus 410 fk~~~~~-~A~~~Y~~al~~l~~~~~~~~~~~~~~~~~~~~l~~N~a~~~lk~~~----------~~~ai~~~~~al~~d 478 (492)
-+++.|. +|+..+.++|.. .+-..++++.+..+...++. +.+++..++++|..+
T Consensus 40 ~~~~e~s~eaL~~t~~~L~~---------------nP~~ytaWn~Rr~iL~~l~~~~~~~~~~~~l~~EL~~~~~~L~~~ 104 (331)
T 3dss_A 40 RQAGELDESVLELTSQILGA---------------NPDFATLWNCRREVLQHLETEKSPEESAALVKAELGFLESCLRVN 104 (331)
T ss_dssp HHTTCCSHHHHHHHHHHHTT---------------CTTCHHHHHHHHHHHHHHHHHSCHHHHHHHHHHHHHHHHHHHHHC
T ss_pred HHcCCCCHHHHHHHHHHHHH---------------CchhHHHHHHHHHHHHHhcccccchhhhHHHHHHHHHHHHHHHhC
Confidence 3566665 789999999876 33347888888888888776 789999999999999
Q ss_pred CCCccceeee
Q 011164 479 KFLLLPIFNI 488 (492)
Q Consensus 479 p~n~KA~~r~ 488 (492)
|+|..||+.+
T Consensus 105 PKny~aW~hR 114 (331)
T 3dss_A 105 PKSYGTWHHR 114 (331)
T ss_dssp TTCHHHHHHH
T ss_pred CCCHHHHHHH
Confidence 9998887644
No 282
>2w2u_A Hypothetical P60 katanin; hydrolase transport complex, nucleotide-binding, ESCRT, AAA-ATPase, cytokinesis, ATP-binding; 2.20A {Sulfolobus acidocaldarius}
Probab=92.19 E-value=0.15 Score=38.37 Aligned_cols=43 Identities=23% Similarity=0.200 Sum_probs=36.4
Q ss_pred CCChH-HHHHHHHHHHHhhhHHHHcccHHHHHHHHHHHHHHhcc
Q 011164 389 DMNTE-EKIEAAGKKKEQGNTLFKAGKYARASKRYEKAVKYIEY 431 (492)
Q Consensus 389 ~~~~~-e~l~~a~~~K~~Gn~~fk~~~~~~A~~~Y~~al~~l~~ 431 (492)
.|++. ..++.|..+-.+|.++=+.|+|.+|+.+|..|+.++..
T Consensus 8 ~~~~~~~~~~~Ai~lv~~Ave~D~~g~y~eAl~lY~~aie~l~~ 51 (83)
T 2w2u_A 8 HMSAQVMLEEMARKYAINAVKADKEGNAEEAITNYKKAIEVLAQ 51 (83)
T ss_dssp -CCHHHHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHH
T ss_pred cCCCchHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHH
Confidence 45554 56788999999999999999999999999999998743
No 283
>3q7a_A Farnesyltransferase alpha subunit; protein prenyltransferase, transferase-transferase inhibitor; HET: SUC 3FX FPP 778; 2.00A {Cryptococcus neoformans} PDB: 3q73_A* 3q78_A* 3q79_A* 3q75_A* 3q7f_A* 3sfx_A* 3sfy_A*
Probab=92.05 E-value=0.15 Score=49.68 Aligned_cols=62 Identities=13% Similarity=-0.014 Sum_probs=53.3
Q ss_pred cccHHHHHHHHHHHHHHhcccCCCChHHHHHHHHHHHHhHhHHHHHHHHhc-CHHHHHHHHHHHHhcCCCCccceeee
Q 011164 412 AGKYARASKRYEKAVKYIEYDTSFGDEEKKQAKALKVACNLNNAACKLKLK-DYKQAEKLCTKVQQQKKFLLLPIFNI 488 (492)
Q Consensus 412 ~~~~~~A~~~Y~~al~~l~~~~~~~~~~~~~~~~~~~~l~~N~a~~~lk~~-~~~~ai~~~~~al~~dp~n~KA~~r~ 488 (492)
.+...+|+..+.++|.. ++-..+++++|..+..+++ .+++++..++++|..+|+|..||+.+
T Consensus 67 ~e~se~AL~lt~~~L~~---------------nP~~ytaWn~R~~iL~~l~~~l~eEL~~~~~~L~~nPKny~aW~hR 129 (349)
T 3q7a_A 67 EEKSERALELTEIIVRM---------------NPAHYTVWQYRFSLLTSLNKSLEDELRLMNEFAVQNLKSYQVWHHR 129 (349)
T ss_dssp TCCSHHHHHHHHHHHHH---------------CTTCHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHTTCCCHHHHHHH
T ss_pred CCCCHHHHHHHHHHHHh---------------CchhHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHhCCCcHHHHHHH
Confidence 34567899999999987 3445889999999999999 59999999999999999998887643
No 284
>2ooe_A Cleavage stimulation factor 77 kDa subunit; HAT domain, structural protein; 3.00A {Mus musculus} SCOP: a.118.8.7
Probab=91.41 E-value=0.14 Score=52.78 Aligned_cols=68 Identities=16% Similarity=0.039 Sum_probs=55.2
Q ss_pred HHhhhHHHHcccHHHHHHHHHHHHHHhcccCCCChHHHHHHHHHHHHhHhHHHHHHHHhcCHHHHHHHHHHHHhcCCCCc
Q 011164 403 KEQGNTLFKAGKYARASKRYEKAVKYIEYDTSFGDEEKKQAKALKVACNLNNAACKLKLKDYKQAEKLCTKVQQQKKFLL 482 (492)
Q Consensus 403 K~~Gn~~fk~~~~~~A~~~Y~~al~~l~~~~~~~~~~~~~~~~~~~~l~~N~a~~~lk~~~~~~ai~~~~~al~~dp~n~ 482 (492)
...+. +.+.+++.+|...|++++.... ....++.+++...++++++++|+..+++++...| ++
T Consensus 17 ~~l~~-~~~~~~~~~a~~~~e~al~~~P---------------~~~~~w~~~~~~~~~~~~~~~a~~~~~ral~~~p-~~ 79 (530)
T 2ooe_A 17 SILIR-EAQNQPIDKARKTYERLVAQFP---------------SSGRFWKLYIEAEIKAKNYDKVEKLFQRCLMKVL-HI 79 (530)
T ss_dssp HHHHH-HHHSSCHHHHHHHHHHHHTTCT---------------TCHHHHHHHHHHHHHTTCHHHHHHHHHHHTTTCC-CH
T ss_pred HHHHH-HHHhCCHHHHHHHHHHHHHHCC---------------CCHHHHHHHHHHHHhcCCHHHHHHHHHHHHhcCC-Ch
Confidence 33444 3567999999999999998743 2378889999999999999999999999999999 56
Q ss_pred cceee
Q 011164 483 LPIFN 487 (492)
Q Consensus 483 KA~~r 487 (492)
..|+.
T Consensus 80 ~lw~~ 84 (530)
T 2ooe_A 80 DLWKC 84 (530)
T ss_dssp HHHHH
T ss_pred HHHHH
Confidence 65443
No 285
>2v6x_A Vacuolar protein sorting-associated protein 4; protein transport, vacuole, endosome, transport, ESCRT-III, VPS2, VPS4, SKD1, VPS4B, VPS4A; 1.98A {Saccharomyces cerevisiae}
Probab=91.32 E-value=0.43 Score=36.05 Aligned_cols=42 Identities=19% Similarity=0.246 Sum_probs=35.0
Q ss_pred CChHHHHHHHHHHHHhhhHHHHcccHHHHHHHHHHHHHHhcc
Q 011164 390 MNTEEKIEAAGKKKEQGNTLFKAGKYARASKRYEKAVKYIEY 431 (492)
Q Consensus 390 ~~~~e~l~~a~~~K~~Gn~~fk~~~~~~A~~~Y~~al~~l~~ 431 (492)
|+..+.++.|..+-.+|...=+.|+|.+|+.+|..|+.++..
T Consensus 4 m~~~~~l~~A~~l~~~Av~~D~~g~y~eAl~~Y~~aie~l~~ 45 (85)
T 2v6x_A 4 MSTGDFLTKGIELVQKAIDLDTATQYEEAYTAYYNGLDYLML 45 (85)
T ss_dssp CCCSCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHH
T ss_pred CccHHHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHH
Confidence 343456778888888999999999999999999999998743
No 286
>1wfd_A Hypothetical protein 1500032H18; MIT domain, structural genomics, riken structural genomics/proteomics initiative, RSGI, unknown function; NMR {Mus musculus} SCOP: a.7.14.1
Probab=91.13 E-value=0.79 Score=35.21 Aligned_cols=63 Identities=14% Similarity=0.134 Sum_probs=42.4
Q ss_pred HHHHHHHHHHHhhhHHHHcccHHHHHHHHHHHHHHhcccC-CCChHHHHHHHHHHHHhHhHHHH
Q 011164 394 EKIEAAGKKKEQGNTLFKAGKYARASKRYEKAVKYIEYDT-SFGDEEKKQAKALKVACNLNNAA 456 (492)
Q Consensus 394 e~l~~a~~~K~~Gn~~fk~~~~~~A~~~Y~~al~~l~~~~-~~~~~~~~~~~~~~~~l~~N~a~ 456 (492)
..++.|..+-.+|.++=+.++|.+|+.+|..|+.++.... ...++.....-..+..=|.+||-
T Consensus 10 ~~l~~Ai~lv~~Ave~D~~g~y~eAl~~Y~~Aie~l~~alk~e~~~~~k~~l~~K~~eYl~RAE 73 (93)
T 1wfd_A 10 SDSTAAVAVLKRAVELDAESRYQQALVCYQEGIDMLLQVLKGTKESSKRCVLRTKISGYMDRAE 73 (93)
T ss_dssp CHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHHHTCCCHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHH
Confidence 4567788888999999999999999999999999875431 11222233333334444555554
No 287
>4a5x_A MITD1, MIT domain-containing protein 1; protein transport, ESCRT, cytokinesis, midbody; HET: P15; 1.91A {Homo sapiens}
Probab=90.28 E-value=0.97 Score=34.15 Aligned_cols=35 Identities=17% Similarity=0.232 Sum_probs=29.5
Q ss_pred HHHHHHHHhhhHHHHcccHHHHHHHHHHHHHHhcc
Q 011164 397 EAAGKKKEQGNTLFKAGKYARASKRYEKAVKYIEY 431 (492)
Q Consensus 397 ~~a~~~K~~Gn~~fk~~~~~~A~~~Y~~al~~l~~ 431 (492)
..|..+-.++..+=+.|+|.+|+.+|..|+.++..
T Consensus 14 ~~A~~lv~~Ave~D~~g~y~eAl~lY~~Aie~ll~ 48 (86)
T 4a5x_A 14 TAAATVLKRAVELDSESRYPQALVCYQEGIDLLLQ 48 (86)
T ss_dssp HHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHH
Confidence 34666778888888999999999999999998753
No 288
>1b89_A Protein (clathrin heavy chain); triskelion, coated vesicles, endocytosis, SELF- assembly, alpha-alpha superhelix; 2.60A {Bos taurus} SCOP: a.118.1.3
Probab=89.89 E-value=0.91 Score=45.60 Aligned_cols=83 Identities=10% Similarity=-0.044 Sum_probs=59.6
Q ss_pred HHHHHHHHHHHhhhHHHHcccHHHHHHHHHHHHHHhcccCCCChHHHHHHHH-------------------HHHHhHhHH
Q 011164 394 EKIEAAGKKKEQGNTLFKAGKYARASKRYEKAVKYIEYDTSFGDEEKKQAKA-------------------LKVACNLNN 454 (492)
Q Consensus 394 e~l~~a~~~K~~Gn~~fk~~~~~~A~~~Y~~al~~l~~~~~~~~~~~~~~~~-------------------~~~~l~~N~ 454 (492)
.....+..+-..|+.+++.|+|+.|++.|++|... ..+..+-. ....-...+
T Consensus 143 ~~Y~~a~n~~~LA~~L~~Lg~yq~AVea~~KA~~~---------~~Wk~v~~aCv~~~ef~lA~~~~l~L~~~ad~l~~l 213 (449)
T 1b89_A 143 LLYNNVSNFGRLASTLVHLGEYQAAVDGARKANST---------RTWKEVCFACVDGKEFRLAQMCGLHIVVHADELEEL 213 (449)
T ss_dssp HHHHHTTCHHHHHHHHHTTTCHHHHHHHHHHHTCH---------HHHHHHHHHHHHTTCHHHHHHTTTTTTTCHHHHHHH
T ss_pred HHHHHhhhHHHHHHHHHHhccHHHHHHHHHHcCCc---------hhHHHHHHHHHHcCcHHHHHHHHHHHHhCHhhHHHH
Confidence 44567778888999999999999999999999432 11111000 000112246
Q ss_pred HHHHHHhcCHHHHHHHHHHHHhcCCCCccce
Q 011164 455 AACKLKLKDYKQAEKLCTKVQQQKKFLLLPI 485 (492)
Q Consensus 455 a~~~lk~~~~~~ai~~~~~al~~dp~n~KA~ 485 (492)
+.+|.+.|+|++|+....++|.+++.+.-++
T Consensus 214 v~~Yek~G~~eEai~lLe~aL~le~ah~~~f 244 (449)
T 1b89_A 214 INYYQDRGYFEELITMLEAALGLERAHMGMF 244 (449)
T ss_dssp HHHHHHTTCHHHHHHHHHHHTTSTTCCHHHH
T ss_pred HHHHHHCCCHHHHHHHHHHHhCCcHHHHHHH
Confidence 7899999999999999999999998775443
No 289
>1xi4_A Clathrin heavy chain; alpha-ZIG-ZAG, beta-propeller, endocytosis-exocyto complex; 7.90A {Bos taurus} SCOP: i.23.1.1 PDB: 1xi5_A 3iyv_A
Probab=89.11 E-value=0.53 Score=53.83 Aligned_cols=11 Identities=27% Similarity=0.522 Sum_probs=4.2
Q ss_pred EEEEcCCcccc
Q 011164 318 FEFKTDEEQVI 328 (492)
Q Consensus 318 ~~~~lg~~~~~ 328 (492)
+.+.+.+..++
T Consensus 325 l~v~v~~~~iv 335 (1630)
T 1xi4_A 325 LSVCVEEENII 335 (1630)
T ss_pred EEEEEccchhh
Confidence 33333333333
No 290
>4gns_B Protein CSD3, chitin biosynthesis protein CHS6; FN3, BRCT, tetratricopeptide repeat, cargo adaptor, transpor; HET: EPE; 2.75A {Saccharomyces cerevisiae}
Probab=88.99 E-value=0.74 Score=49.48 Aligned_cols=59 Identities=20% Similarity=0.197 Sum_probs=51.6
Q ss_pred HHHHhhhHHHHcccHHHHHHHHHHHHHHhcccCCCChHHHHHHHHHHHHhHhHHHHHHHHhcCHHHHHHHHHHH
Q 011164 401 KKKEQGNTLFKAGKYARASKRYEKAVKYIEYDTSFGDEEKKQAKALKVACNLNNAACKLKLKDYKQAEKLCTKV 474 (492)
Q Consensus 401 ~~K~~Gn~~fk~~~~~~A~~~Y~~al~~l~~~~~~~~~~~~~~~~~~~~l~~N~a~~~lk~~~~~~ai~~~~~a 474 (492)
-+-.++.-|.++++|+.|+..-++|+...... ..++.+||.||+++++|+.|+-..+-+
T Consensus 339 LL~~Qa~FLl~K~~~elAL~~Ak~AV~~aPse---------------F~tW~~La~vYi~l~d~e~ALLtLNSc 397 (754)
T 4gns_B 339 LLNIQTNFLLNRGDYELALGVSNTSTELALDS---------------FESWYNLARCHIKKEEYEKALFAINSM 397 (754)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHHHHHHHCSSC---------------HHHHHHHHHHHHHTTCHHHHHHHHHHS
T ss_pred HHHHHHHHHhccCcHHHHHHHHHHHHhcCchh---------------hHHHHHHHHHHHHhccHHHHHHHHhcC
Confidence 45667888889999999999999999985543 788999999999999999999887776
No 291
>3mv2_A Coatomer subunit alpha; vesicular membrane coat COAT protein complex I, protein TRAN; 2.90A {Saccharomyces cerevisiae} PDB: 3mv3_A
Probab=88.98 E-value=3.4 Score=39.21 Aligned_cols=80 Identities=21% Similarity=0.152 Sum_probs=52.3
Q ss_pred HHHhhhHHHHcccHHHHHHHHHHHHHHhcccCCCChHHHHHHH-------------------------------------
Q 011164 402 KKEQGNTLFKAGKYARASKRYEKAVKYIEYDTSFGDEEKKQAK------------------------------------- 444 (492)
Q Consensus 402 ~K~~Gn~~fk~~~~~~A~~~Y~~al~~l~~~~~~~~~~~~~~~------------------------------------- 444 (492)
....|-++|+.|+|.+|+..++.+|..+....-.++++..++.
T Consensus 117 ~Lk~gyk~~t~gKf~eAl~~Fr~iL~~i~l~~v~~~~e~~e~~eli~icrEYilal~iEl~Rr~l~~~~~kR~lELAAYF 196 (325)
T 3mv2_A 117 KMNEGYKNFKLNKPDIAIECFREAIYRITLLMVDDAEDEKLAHKILETAREYILGLSIELERRSLKEGNTVRMLELAAYF 196 (325)
T ss_dssp HHHHHHHHHHTTCHHHHHHHHHHHHHHHHTCCBCSSHHHHHHHHHHHHHHHHHHHHHHHHHHHTCCTTCHHHHHHHHHHG
T ss_pred HHHHHHHHHhcCCHHHHHHHHHHHHHHhheeeeccHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCcccHHHHHHHHHHh
Confidence 3448999999999999999999999876432211111111111
Q ss_pred ------HHHHHhHhHHHH-HHHHhcCHHHHHHHHHHHHhcCCCC
Q 011164 445 ------ALKVACNLNNAA-CKLKLKDYKQAEKLCTKVQQQKKFL 481 (492)
Q Consensus 445 ------~~~~~l~~N~a~-~~lk~~~~~~ai~~~~~al~~dp~n 481 (492)
+....+-++.|+ ..+|.++|..|...+++.|++.|+.
T Consensus 197 T~c~LQp~H~~LaLr~AM~~a~K~KNy~tAa~fArrLLel~p~~ 240 (325)
T 3mv2_A 197 TKAKLSPIHRTNALQVAMSQHFKHKNFLQASYFAGEFLKIISSG 240 (325)
T ss_dssp GGSCCCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHTTCCSS
T ss_pred ccCCCcHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHhcCCCH
Confidence 011111122333 5678999999999999999998853
No 292
>2crb_A Nuclear receptor binding factor 2; NRBF-2, MIT domain, helix bundle, structural genomics, NPPSFA; NMR {Mus musculus} SCOP: a.7.16.1
Probab=88.90 E-value=2 Score=32.41 Aligned_cols=42 Identities=24% Similarity=0.400 Sum_probs=34.4
Q ss_pred HHHHHHHHHhhhHHHHcccHHHHHHHHHHHHHHhcccCCCCh
Q 011164 396 IEAAGKKKEQGNTLFKAGKYARASKRYEKAVKYIEYDTSFGD 437 (492)
Q Consensus 396 l~~a~~~K~~Gn~~fk~~~~~~A~~~Y~~al~~l~~~~~~~~ 437 (492)
+..|...--++..+.+.|+|.+||.++++|..+|......++
T Consensus 12 Ln~AH~~~RrAe~ll~~gkydeAIech~kAa~yL~eAmkltq 53 (97)
T 2crb_A 12 LNLAHQQSRRADRLLAAGKYEEAISCHRKATTYLSEAMKLTE 53 (97)
T ss_dssp HHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHHTTCC
T ss_pred hhhhhHhhhHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHhhc
Confidence 445677777889999999999999999999999976555443
No 293
>3e4b_A ALGK; tetratricopeptide repeat, superhelix, alginate biosynt pseudomonas, protein binding; 2.50A {Pseudomonas fluorescens}
Probab=88.58 E-value=0.25 Score=49.97 Aligned_cols=85 Identities=18% Similarity=-0.040 Sum_probs=49.8
Q ss_pred HHHhhhHHHHcc---cHHHHHHHHHHHHHHhccc--------------CCCChHHHHHHH------HHHHHhHhHHHHH-
Q 011164 402 KKEQGNTLFKAG---KYARASKRYEKAVKYIEYD--------------TSFGDEEKKQAK------ALKVACNLNNAAC- 457 (492)
Q Consensus 402 ~K~~Gn~~fk~~---~~~~A~~~Y~~al~~l~~~--------------~~~~~~~~~~~~------~~~~~l~~N~a~~- 457 (492)
....|..+.+.| ++.+|+..|+++++.-... .....+....+. +-....++|++.+
T Consensus 179 ~~~Lg~~~~~~g~~~~~~~A~~~~~~aa~~g~~~a~~~~~Lg~~y~~g~~~~~d~~~A~~~~~~aa~g~~~a~~~Lg~~~ 258 (452)
T 3e4b_A 179 YVELATVYQKKQQPEQQAELLKQMEAGVSRGTVTAQRVDSVARVLGDATLGTPDEKTAQALLEKIAPGYPASWVSLAQLL 258 (452)
T ss_dssp HHHHHHHHHHTTCHHHHHHHHHHHHHHHHTTCSCHHHHHHHHHHHTCGGGSSCCHHHHHHHHHHHGGGSTHHHHHHHHHH
T ss_pred HHHHHHHHHHcCCcccHHHHHHHHHHHHHCCCHHHHHHHHHHHHHhCCCCCCCCHHHHHHHHHHHcCCCHHHHHHHHHHH
Confidence 345666777778 9999999999987642110 000001111111 2234557777777
Q ss_pred H--HHhcCHHHHHHHHHHHHhcCCCCccceeee
Q 011164 458 K--LKLKDYKQAEKLCTKVQQQKKFLLLPIFNI 488 (492)
Q Consensus 458 ~--lk~~~~~~ai~~~~~al~~dp~n~KA~~r~ 488 (492)
+ ...+++++|+..+.++++. ++..|+|+.
T Consensus 259 ~~~~~~~d~~~A~~~~~~Aa~~--g~~~A~~~L 289 (452)
T 3e4b_A 259 YDFPELGDVEQMMKYLDNGRAA--DQPRAELLL 289 (452)
T ss_dssp HHSGGGCCHHHHHHHHHHHHHT--TCHHHHHHH
T ss_pred HhCCCCCCHHHHHHHHHHHHHC--CCHHHHHHH
Confidence 3 4567778888888777754 356666543
No 294
>2ooe_A Cleavage stimulation factor 77 kDa subunit; HAT domain, structural protein; 3.00A {Mus musculus} SCOP: a.118.8.7
Probab=88.46 E-value=0.81 Score=46.94 Aligned_cols=65 Identities=14% Similarity=0.196 Sum_probs=40.4
Q ss_pred HHHhhhHHHH-------cccHH-------HHHHHHHHHHH-HhcccCCCChHHHHHHHHHHHHhHhHHHHHHHHhcCHHH
Q 011164 402 KKEQGNTLFK-------AGKYA-------RASKRYEKAVK-YIEYDTSFGDEEKKQAKALKVACNLNNAACKLKLKDYKQ 466 (492)
Q Consensus 402 ~K~~Gn~~fk-------~~~~~-------~A~~~Y~~al~-~l~~~~~~~~~~~~~~~~~~~~l~~N~a~~~lk~~~~~~ 466 (492)
+...|.-+.+ .|++. +|+..|++|++ .... ...++.+++..+.+++++++
T Consensus 275 w~~~~~~~~~~~~~~~~~g~~~~a~~~~~~A~~~~~~Al~~~~p~---------------~~~l~~~~~~~~~~~g~~~~ 339 (530)
T 2ooe_A 275 WYEAAQYLEQSSKLLAEKGDMNNAKLFSDEAANIYERAISTLLKK---------------NMLLYFAYADYEESRMKYEK 339 (530)
T ss_dssp HHHHHHHHHHHHHHHHTTTCCHHHHHHHHHHHHHHHHHTTTTCSS---------------CHHHHHHHHHHHHHTTCHHH
T ss_pred HHHHHHHHHHhchhhhhccchhhhhhhhHHHHHHHHHHHHHhCcc---------------cHHHHHHHHHHHHhcCCHHH
Confidence 3445555554 68876 89999999996 4221 14455556666666666666
Q ss_pred HHHHHHHHHhcCCCC
Q 011164 467 AEKLCTKVQQQKKFL 481 (492)
Q Consensus 467 ai~~~~~al~~dp~n 481 (492)
|+..++++|+++|.+
T Consensus 340 A~~~~~~al~~~p~~ 354 (530)
T 2ooe_A 340 VHSIYNRLLAIEDID 354 (530)
T ss_dssp HHHHHHHHHHSSSSC
T ss_pred HHHHHHHHhCccccC
Confidence 666666666665554
No 295
>3ly7_A Transcriptional activator CADC; alpha/beta domain, alpha domain, DNA-binding, transcription regulation, transmembrane; 1.80A {Escherichia coli} PDB: 3lya_A 3ly8_A 3ly9_A
Probab=88.40 E-value=1.6 Score=42.68 Aligned_cols=62 Identities=6% Similarity=-0.079 Sum_probs=50.5
Q ss_pred hhhHHHHcccHHHHHHHHHHHHHHhcccCCCChHHHHHHHHHHHHhHhHHHHHHHHhcCHHHHHHHHHHHHhcCCCCc
Q 011164 405 QGNTLFKAGKYARASKRYEKAVKYIEYDTSFGDEEKKQAKALKVACNLNNAACKLKLKDYKQAEKLCTKVQQQKKFLL 482 (492)
Q Consensus 405 ~Gn~~fk~~~~~~A~~~Y~~al~~l~~~~~~~~~~~~~~~~~~~~l~~N~a~~~lk~~~~~~ai~~~~~al~~dp~n~ 482 (492)
.+..++-+|++.+|+...++|+.+ +. ....|.-++.++.-.|++++|++.+.+|+.++|...
T Consensus 283 lal~~l~~gd~d~A~~~l~rAl~L-n~---------------s~~a~~llG~~~~~~G~~~eA~e~~~~AlrL~P~~~ 344 (372)
T 3ly7_A 283 KAVSALVKGKTDESYQAINTGIDL-EM---------------SWLNYVLLGKVYEMKGMNREAADAYLTAFNLRPGAN 344 (372)
T ss_dssp HHHHHHHHTCHHHHHHHHHHHHHH-CC---------------CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHSCSHH
T ss_pred HHHHHHhCCCHHHHHHHHHHHHhc-CC---------------CHHHHHHHHHHHHHCCCHHHHHHHHHHHHhcCCCcC
Confidence 444566689999999999999987 11 134556688999999999999999999999999753
No 296
>2xm6_A Protein corresponding to locus C5321 from CFT073 strain; unknown function, SEL1-like repeats; 1.68A {Escherichia coli}
Probab=86.89 E-value=1.1 Score=45.47 Aligned_cols=86 Identities=13% Similarity=-0.038 Sum_probs=48.0
Q ss_pred HHHHHhhhHHHH----cccHHHHHHHHHHHHHHhc------------ccC--CCChHHH-----HHHHHHHHHhHhHHHH
Q 011164 400 GKKKEQGNTLFK----AGKYARASKRYEKAVKYIE------------YDT--SFGDEEK-----KQAKALKVACNLNNAA 456 (492)
Q Consensus 400 ~~~K~~Gn~~fk----~~~~~~A~~~Y~~al~~l~------------~~~--~~~~~~~-----~~~~~~~~~l~~N~a~ 456 (492)
......|..++. .+++.+|+..|+++++.-. ... ..+.+.. .....-....+.|++.
T Consensus 40 ~a~~~lg~~y~~g~~~~~~~~~A~~~~~~a~~~~~~~a~~~Lg~~y~~g~g~~~~~~~A~~~~~~a~~~~~~~a~~~Lg~ 119 (490)
T 2xm6_A 40 KAQLELGYRYFQGNETTKDLTQAMDWFRRAAEQGYTPAEYVLGLRYMNGEGVPQDYAQAVIWYKKAALKGLPQAQQNLGV 119 (490)
T ss_dssp HHHHHHHHHHHHTSSSCCCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHTSSSCCCHHHHHHHHHHHHHTTCHHHHHHHHH
T ss_pred HHHHHHHHHHHcCCCCCcCHHHHHHHHHHHHHCCCHHHHHHHHHHHHcCCCCCCCHHHHHHHHHHHHHCCCHHHHHHHHH
Confidence 345566666666 7888888888888775310 000 0000100 0111123445667777
Q ss_pred HHHH----hcCHHHHHHHHHHHHhcCCCCccceee
Q 011164 457 CKLK----LKDYKQAEKLCTKVQQQKKFLLLPIFN 487 (492)
Q Consensus 457 ~~lk----~~~~~~ai~~~~~al~~dp~n~KA~~r 487 (492)
+|.. .+++++|+..+.++++. ++..|+++
T Consensus 120 ~y~~g~g~~~~~~~A~~~~~~a~~~--~~~~a~~~ 152 (490)
T 2xm6_A 120 MYHEGNGVKVDKAESVKWFRLAAEQ--GRDSGQQS 152 (490)
T ss_dssp HHHHTSSSCCCHHHHHHHHHHHHHT--TCHHHHHH
T ss_pred HHHcCCCCCCCHHHHHHHHHHHHHC--CCHHHHHH
Confidence 7777 67777777777777664 35555544
No 297
>2dl1_A Spartin; SPG20, MIT, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=86.83 E-value=4.7 Score=31.98 Aligned_cols=74 Identities=11% Similarity=0.085 Sum_probs=56.7
Q ss_pred HHHHHHHHHHHhhhHHHHcccHHHHHHHHHHHHHHhccc-------CCCChHHHHHHHHHHHHhHhHHHHHHHHhcCHHH
Q 011164 394 EKIEAAGKKKEQGNTLFKAGKYARASKRYEKAVKYIEYD-------TSFGDEEKKQAKALKVACNLNNAACKLKLKDYKQ 466 (492)
Q Consensus 394 e~l~~a~~~K~~Gn~~fk~~~~~~A~~~Y~~al~~l~~~-------~~~~~~~~~~~~~~~~~l~~N~a~~~lk~~~~~~ 466 (492)
+....|-.+..+|-..=..|+-..|+.+|++++..|... +....+.+...+.++.....||..+.-+++....
T Consensus 17 ~~h~~AF~~Is~AL~~DE~g~k~~Al~lYk~GI~eLe~Gl~I~~~~~~~~g~~we~Ar~lq~KM~~nL~~v~~RL~~Le~ 96 (116)
T 2dl1_A 17 EAYKKAFLFVNKGLNTDELGQKEEAKNYYKQGIGHLLRGISISSKESEHTGPGWESARQMQQKMKETLQNVRTRLEILEK 96 (116)
T ss_dssp HHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHHHSSCCCCTTCCCSHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhhhhhcCCHHHHHHHHHHHHHHHHHhccccccCCCCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 344556666666766666799999999999999988542 2245688999999999999999999888875544
Q ss_pred H
Q 011164 467 A 467 (492)
Q Consensus 467 a 467 (492)
.
T Consensus 97 ~ 97 (116)
T 2dl1_A 97 G 97 (116)
T ss_dssp H
T ss_pred c
Confidence 3
No 298
>3mkr_B Coatomer subunit alpha; tetratricopeptide repeats (TPR), beta-hairpin, alpha-solenoi transport protein; 2.60A {Bos taurus}
Probab=86.66 E-value=7.7 Score=36.78 Aligned_cols=79 Identities=15% Similarity=0.215 Sum_probs=51.6
Q ss_pred HHHhhhHHHHcccHHHHHHHHHHHHHHhcccCCCChHHHHHH--------------------------------------
Q 011164 402 KKEQGNTLFKAGKYARASKRYEKAVKYIEYDTSFGDEEKKQA-------------------------------------- 443 (492)
Q Consensus 402 ~K~~Gn~~fk~~~~~~A~~~Y~~al~~l~~~~~~~~~~~~~~-------------------------------------- 443 (492)
....|-++|+.|+|.+|+..++.+|..+....-.++++..++
T Consensus 105 ~Lk~gyk~~t~gKf~eAl~~Fr~iL~~i~l~~v~~~~e~~e~~eli~icreYilal~iEl~Rr~l~~~~~~~~kR~lELA 184 (320)
T 3mkr_B 105 RLQLCYQLTTVGKFEEAVEKFRSILLSVPLLVVDNKQEIAEAQQLITICREYIVGLSMETERKKLPKETLEQQKRICEMA 184 (320)
T ss_dssp HHHHHHHHHHTTCHHHHHHHHHHHHHHGGGCCCCSHHHHHHHHHHHHHHHHHHHHHHHHHHHTTSCCCSHHHHHHHHHHH
T ss_pred HHHHHHHHHhcCCHHHHHHHHHHHHHHhhheeeccHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccCCchhHHHHHHHH
Confidence 346799999999999999999999987743221121111110
Q ss_pred --------HHHHHHhHhHHHH-HHHHhcCHHHHHHHHHHHHhcCCC
Q 011164 444 --------KALKVACNLNNAA-CKLKLKDYKQAEKLCTKVQQQKKF 480 (492)
Q Consensus 444 --------~~~~~~l~~N~a~-~~lk~~~~~~ai~~~~~al~~dp~ 480 (492)
.+....+-++.|+ ..+|.++|..|...+++.|++.|+
T Consensus 185 AYFT~c~Lqp~H~~LaLr~AM~~a~K~KNy~tAa~fArrLLel~p~ 230 (320)
T 3mkr_B 185 AYFTHSNLQPVHMILVLRTALNLFFKLKNFRTAAAFARRLLELGPK 230 (320)
T ss_dssp HHHTTSCCCHHHHHHHHHHHHHHHHHTTBHHHHHHHHHHHHHTCCC
T ss_pred HHhccCCCcHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHhcCCC
Confidence 0111112222333 567899999999999999999874
No 299
>3e4b_A ALGK; tetratricopeptide repeat, superhelix, alginate biosynt pseudomonas, protein binding; 2.50A {Pseudomonas fluorescens}
Probab=85.47 E-value=0.58 Score=47.19 Aligned_cols=18 Identities=11% Similarity=0.117 Sum_probs=13.9
Q ss_pred HcccHHHHHHHHHHHHHH
Q 011164 411 KAGKYARASKRYEKAVKY 428 (492)
Q Consensus 411 k~~~~~~A~~~Y~~al~~ 428 (492)
..+++.+|+..|+++++.
T Consensus 263 ~~~d~~~A~~~~~~Aa~~ 280 (452)
T 3e4b_A 263 ELGDVEQMMKYLDNGRAA 280 (452)
T ss_dssp GGCCHHHHHHHHHHHHHT
T ss_pred CCCCHHHHHHHHHHHHHC
Confidence 467888888888888753
No 300
>3bee_A Putative YFRE protein; putaive YFRE protein, structural GE PSI-2, protein structure initiative; 2.15A {Vibrio parahaemolyticus rimd 2210633}
Probab=83.49 E-value=0.79 Score=35.06 Aligned_cols=40 Identities=10% Similarity=-0.031 Sum_probs=33.6
Q ss_pred HHhHhHHHHHHHHhcC---HHHHHHHHHHHHhcCCCCccceee
Q 011164 448 VACNLNNAACKLKLKD---YKQAEKLCTKVQQQKKFLLLPIFN 487 (492)
Q Consensus 448 ~~l~~N~a~~~lk~~~---~~~ai~~~~~al~~dp~n~KA~~r 487 (492)
..++..+|.+++-.++ ..+|.....++|.+||+|++|++-
T Consensus 6 ~~~~~~~a~al~~~~~~~~~~~A~~~l~~AL~~dp~~~rA~~~ 48 (93)
T 3bee_A 6 ATQLAAKATTLYYLHKQAMTDEVSLLLEQALQLEPYNEAALSL 48 (93)
T ss_dssp HHHHHHHHHHHHHTTTTCCCHHHHHHHHHHHHHCTTCHHHHHH
T ss_pred HHHHHHHHHHHHHhcCCCCCHHHHHHHHHHHHHCcCCHHHHHH
Confidence 4567778888876665 799999999999999999998763
No 301
>3mv2_B Coatomer subunit epsilon; vesicular membrane coat COAT protein complex I, protein TRAN; 2.90A {Saccharomyces cerevisiae} PDB: 3mv3_B
Probab=81.32 E-value=2 Score=40.92 Aligned_cols=64 Identities=8% Similarity=-0.038 Sum_probs=51.8
Q ss_pred HHhhhHHHHcccHHHHHHHHHHHHHHhcccCCCChHHHHHHHHHHHHhHhHHHHHHHHhcCHHHHHHHHHHHHhcCC
Q 011164 403 KEQGNTLFKAGKYARASKRYEKAVKYIEYDTSFGDEEKKQAKALKVACNLNNAACKLKLKDYKQAEKLCTKVQQQKK 479 (492)
Q Consensus 403 K~~Gn~~fk~~~~~~A~~~Y~~al~~l~~~~~~~~~~~~~~~~~~~~l~~N~a~~~lk~~~~~~ai~~~~~al~~dp 479 (492)
--.|..++..|++++|++.+++++..-+. .....++.-++.+++++++.+.|.....+..+.+|
T Consensus 104 ~~la~i~~~~g~~eeAL~~l~~~i~~~~~-------------~~~lea~~l~vqi~L~~~r~d~A~k~l~~~~~~~~ 167 (310)
T 3mv2_B 104 YLLATAQAILGDLDKSLETCVEGIDNDEA-------------EGTTELLLLAIEVALLNNNVSTASTIFDNYTNAIE 167 (310)
T ss_dssp HHHHHHHHHHTCHHHHHHHHHHHHTSSCS-------------TTHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHSC
T ss_pred HHHHHHHHHcCCHHHHHHHHHHHhccCCC-------------cCcHHHHHHHHHHHHHCCCHHHHHHHHHHHHhcCc
Confidence 46777888899999999999999754110 12366677789999999999999999999988887
No 302
>3mv2_B Coatomer subunit epsilon; vesicular membrane coat COAT protein complex I, protein TRAN; 2.90A {Saccharomyces cerevisiae} PDB: 3mv3_B
Probab=81.10 E-value=1.2 Score=42.59 Aligned_cols=59 Identities=12% Similarity=0.014 Sum_probs=43.7
Q ss_pred cHHHHHHHHHHHHHHhcccCCCChHHHHHHHHHHHHhHhHHHHHHHHhcCHHHHHHHHHHHHhc----------CCCCcc
Q 011164 414 KYARASKRYEKAVKYIEYDTSFGDEEKKQAKALKVACNLNNAACKLKLKDYKQAEKLCTKVQQQ----------KKFLLL 483 (492)
Q Consensus 414 ~~~~A~~~Y~~al~~l~~~~~~~~~~~~~~~~~~~~l~~N~a~~~lk~~~~~~ai~~~~~al~~----------dp~n~K 483 (492)
++++|...|+++..-... -....+++| |++++|+|++|....+.+++. +|+|+.
T Consensus 193 ~~q~A~~~f~El~~~~p~-------------~~~~~lLln---~~~~~g~~~eAe~~L~~l~~~~p~~~~k~~~~p~~~~ 256 (310)
T 3mv2_B 193 TATSNFYYYEELSQTFPT-------------WKTQLGLLN---LHLQQRNIAEAQGIVELLLSDYYSVEQKENAVLYKPT 256 (310)
T ss_dssp TTTHHHHHHHHHHTTSCS-------------HHHHHHHHH---HHHHHTCHHHHHHHHHHHHSHHHHTTTCHHHHSSHHH
T ss_pred cHHHHHHHHHHHHHhCCC-------------cccHHHHHH---HHHHcCCHHHHHHHHHHHHHhcccccccccCCCCCHH
Confidence 888898888887643210 012445666 999999999999999988877 588888
Q ss_pred ceeee
Q 011164 484 PIFNI 488 (492)
Q Consensus 484 A~~r~ 488 (492)
++.+.
T Consensus 257 ~LaN~ 261 (310)
T 3mv2_B 257 FLANQ 261 (310)
T ss_dssp HHHHH
T ss_pred HHHHH
Confidence 77554
No 303
>2wb7_A PT26-6P; extra chromosomal elements, unknown function; 2.60A {Thermococcus SP}
Probab=80.22 E-value=2.6 Score=42.14 Aligned_cols=85 Identities=20% Similarity=0.131 Sum_probs=46.3
Q ss_pred hHHHHHHHHHHHHhh--hHHHHc-ccHHHHHHHHHHHHHHhcccCCCChHHH-------HHHHHHHHHhHhHHHHHHHHh
Q 011164 392 TEEKIEAAGKKKEQG--NTLFKA-GKYARASKRYEKAVKYIEYDTSFGDEEK-------KQAKALKVACNLNNAACKLKL 461 (492)
Q Consensus 392 ~~e~l~~a~~~K~~G--n~~fk~-~~~~~A~~~Y~~al~~l~~~~~~~~~~~-------~~~~~~~~~l~~N~a~~~lk~ 461 (492)
+.+++..|+.+++++ +.-=+. .--++|+.+|++|+.+|+.....++-+. ....++.-.-|+ .|+-..-.
T Consensus 422 L~eKi~~AE~~~~k~e~~~n~~a~~yA~kAi~~Y~~Ai~~L~k~~~tdd~~~v~~~~~~ak~yE~aGDyy~-~AA~k~~y 500 (526)
T 2wb7_A 422 LQEKIDEAEQLLAKAKGMNNENAIEYAQGAIDEYKAAINDLQKAAQQDDYQMFLNYLNAAKKHEMAGDYYV-NAARKALN 500 (526)
T ss_dssp HHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHHHHHHHTTCCSHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHT
T ss_pred HHHHHHHHHHHHHhhhccCCHHHHHHHHHHHHHHHHHHHHHHhhhccCCHHHHHHHHHHhhhhhhccHHHH-HHHHHHhc
Confidence 345556666666554 211122 2347899999999999987553332211 112223333333 34444446
Q ss_pred cCHHHHHHHHHHHHhc
Q 011164 462 KDYKQAEKLCTKVQQQ 477 (492)
Q Consensus 462 ~~~~~ai~~~~~al~~ 477 (492)
|..++|....++|=++
T Consensus 501 G~~eqAe~l~~~A~~~ 516 (526)
T 2wb7_A 501 GDLEQAKIDAEKAKEY 516 (526)
T ss_dssp TCHHHHHHHHHHHHHH
T ss_pred CccHHHHHHHHHHHHH
Confidence 7777777777766443
No 304
>3mkq_A Coatomer beta'-subunit; beta-propeller, alpha-solenoid, transport protein; 2.50A {Saccharomyces cerevisiae} PDB: 2ynp_A
Probab=79.54 E-value=3 Score=44.81 Aligned_cols=74 Identities=16% Similarity=0.122 Sum_probs=44.4
Q ss_pred HHHHhhhHHHHcccHHHHHHHHHHHHHH-----hcccCCCChHHHHHHH-HHHHHhHhHHHH-HHHHhcCHHHHHHHHHH
Q 011164 401 KKKEQGNTLFKAGKYARASKRYEKAVKY-----IEYDTSFGDEEKKQAK-ALKVACNLNNAA-CKLKLKDYKQAEKLCTK 473 (492)
Q Consensus 401 ~~K~~Gn~~fk~~~~~~A~~~Y~~al~~-----l~~~~~~~~~~~~~~~-~~~~~l~~N~a~-~~lk~~~~~~ai~~~~~ 473 (492)
.++..|..+.++++++.|.++|.++-.+ |..... ..+....+. .....-..|.|. |++++|++++|++.|.+
T Consensus 683 ~W~~la~~al~~~~~~~A~~~y~~~~d~~~l~~l~~~~~-~~~~~~~~~~~a~~~~~~~~A~~~~~~~g~~~~a~~~~~~ 761 (814)
T 3mkq_A 683 KWRALGDASLQRFNFKLAIEAFTNAHDLESLFLLHSSFN-NKEGLVTLAKDAETTGKFNLAFNAYWIAGDIQGAKDLLIK 761 (814)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHHHHTCHHHHHHHHHHTT-CHHHHHHHHHHHHHTTCHHHHHHHHHHHTCHHHHHHHHHH
T ss_pred HHHHHHHHHHHcCCHHHHHHHHHHccChhhhHHHHHHcC-CHHHHHHHHHHHHHcCchHHHHHHHHHcCCHHHHHHHHHH
Confidence 4578899999999999999999986322 211111 112222221 111122334444 78888888888887765
Q ss_pred HH
Q 011164 474 VQ 475 (492)
Q Consensus 474 al 475 (492)
.-
T Consensus 762 ~~ 763 (814)
T 3mkq_A 762 SQ 763 (814)
T ss_dssp TT
T ss_pred cC
Confidence 43
No 305
>3u64_A Protein TP_0956; tetratrico peptide repeat, protein-prote interaction, syphilis, lipoprotein, transport protein; 2.30A {Treponema pallidum subsp} PDB: 4di3_A 4di4_A*
Probab=78.64 E-value=1.2 Score=41.98 Aligned_cols=67 Identities=10% Similarity=0.042 Sum_probs=50.5
Q ss_pred HHHHHhhhHHHHc-----ccHHHHHHHHHHHHHHhcccCCCChHHHHHHHHHHHHhHhHHHHHHHH-hcCHHHHHHHHHH
Q 011164 400 GKKKEQGNTLFKA-----GKYARASKRYEKAVKYIEYDTSFGDEEKKQAKALKVACNLNNAACKLK-LKDYKQAEKLCTK 473 (492)
Q Consensus 400 ~~~K~~Gn~~fk~-----~~~~~A~~~Y~~al~~l~~~~~~~~~~~~~~~~~~~~l~~N~a~~~lk-~~~~~~ai~~~~~ 473 (492)
..+.-.|.-+++. |+.++|.+.|++||.+-.. -.+..+...|..++. +++++.+...+++
T Consensus 200 sA~~~LG~lY~~vPp~~gGd~ekA~~~ferAL~LnP~--------------~~id~~v~YA~~l~~~~gd~~~a~~~L~k 265 (301)
T 3u64_A 200 AVWNVLTKFYAAAPESFGGGMEKAHTAFEHLTRYCSA--------------HDPDHHITYADALCIPLNNRAGFDEALDR 265 (301)
T ss_dssp HHHHHHHHHHHHSCTTTTCCHHHHHHHHHHHHHHCCT--------------TCSHHHHHHHHHTTTTTTCHHHHHHHHHH
T ss_pred HHHHHHHHHHHhCCCccCCCHHHHHHHHHHHHHhCCC--------------CCchHHHHHHHHHHHhcCCHHHHHHHHHH
Confidence 3444555555563 9999999999999997321 014556667777777 4999999999999
Q ss_pred HHhcCCC
Q 011164 474 VQQQKKF 480 (492)
Q Consensus 474 al~~dp~ 480 (492)
||..+|.
T Consensus 266 AL~a~p~ 272 (301)
T 3u64_A 266 ALAIDPE 272 (301)
T ss_dssp HHHCCGG
T ss_pred HHcCCCC
Confidence 9999876
No 306
>1pc2_A Mitochondria fission protein; unknown function; NMR {Homo sapiens} SCOP: a.118.8.1
Probab=78.20 E-value=0.29 Score=41.40 Aligned_cols=62 Identities=13% Similarity=0.170 Sum_probs=46.7
Q ss_pred cHHHHHHHHHHHHHHhcccCCCChHHHHHHHHHHHHhHhHHHHHHHHhc---CHHHHHHHHHHHHhcC-C-CCccceeee
Q 011164 414 KYARASKRYEKAVKYIEYDTSFGDEEKKQAKALKVACNLNNAACKLKLK---DYKQAEKLCTKVQQQK-K-FLLLPIFNI 488 (492)
Q Consensus 414 ~~~~A~~~Y~~al~~l~~~~~~~~~~~~~~~~~~~~l~~N~a~~~lk~~---~~~~ai~~~~~al~~d-p-~n~KA~~r~ 488 (492)
....+.+.|.+.+.. ......+..|+|.|+.+.+ +.+++|..+.++++.+ | ++..++|..
T Consensus 13 ~l~~~~~~y~~e~~~---------------~~~~~~~~F~ya~~Lv~S~~~~~~~~gI~lLe~ll~~~~p~~~rd~lY~L 77 (152)
T 1pc2_A 13 DLLKFEKKFQSEKAA---------------GSVSKSTQFEYAWCLVRSKYNDDIRKGIVLLEELLPKGSKEEQRDYVFYL 77 (152)
T ss_dssp HHHHHHHHHHHHHHT---------------TCCCHHHHHHHHHHHHTCSSHHHHHHHHHHHHHHHHHSCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHcc---------------CCCcHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHhcCCccchHHHHHHH
Confidence 445666777777652 1123667789999999988 6779999999999998 7 678888876
Q ss_pred ec
Q 011164 489 YA 490 (492)
Q Consensus 489 ~~ 490 (492)
++
T Consensus 78 Av 79 (152)
T 1pc2_A 78 AV 79 (152)
T ss_dssp HH
T ss_pred HH
Confidence 54
No 307
>2vkj_A TM1634; membrane protein, TPR motif joint center for structural GENO JCSG, structural genomics; 1.65A {Thermotoga maritima} PDB: 2vko_A*
Probab=78.09 E-value=11 Score=28.14 Aligned_cols=32 Identities=28% Similarity=0.442 Sum_probs=29.3
Q ss_pred HHHHHHHHhhhHHHHcccHHHHHHHHHHHHHH
Q 011164 397 EAAGKKKEQGNTLFKAGKYARASKRYEKAVKY 428 (492)
Q Consensus 397 ~~a~~~K~~Gn~~fk~~~~~~A~~~Y~~al~~ 428 (492)
..+..+.+.|..+|+.++|.+|+..++++...
T Consensus 51 ~~~r~~i~eak~~y~~~ny~ea~~l~~k~~n~ 82 (106)
T 2vkj_A 51 KKARSLIAEGKDLFETANYGEALVFFEKALNL 82 (106)
T ss_dssp HHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH
T ss_pred hHHHHHHHHHHHHHHhcchhHHHHHHHHHHcc
Confidence 56777889999999999999999999999976
No 308
>2v5f_A Prolyl 4-hydroxylase subunit alpha-1; endoplasmic reticulum, metal-binding, oxidoreductase; 2.03A {Homo sapiens} PDB: 1tjc_A
Probab=76.75 E-value=2.3 Score=32.87 Aligned_cols=29 Identities=10% Similarity=0.122 Sum_probs=25.8
Q ss_pred HHHHHhhhHHHHcccHHHHHHHHHHHHHH
Q 011164 400 GKKKEQGNTLFKAGKYARASKRYEKAVKY 428 (492)
Q Consensus 400 ~~~K~~Gn~~fk~~~~~~A~~~Y~~al~~ 428 (492)
.-+...|..+|+.|++..|+..|++++++
T Consensus 47 ~i~~~L~~~~~~~g~~~~A~~~~~~al~l 75 (104)
T 2v5f_A 47 SVLDYLSYAVYQQGDLDKALLLTKKLLEL 75 (104)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHccCHHHHHHHHHHHHhc
Confidence 44567899999999999999999999987
No 309
>3txn_A 26S proteasome regulatory complex subunit P42B; PCI domain, alpha solenoid, regulatory PART LID, hydrolase, protein binding; 2.50A {Drosophila melanogaster} PDB: 3txm_A
Probab=76.08 E-value=8.3 Score=37.95 Aligned_cols=65 Identities=15% Similarity=0.104 Sum_probs=55.7
Q ss_pred HhhhHHHHcccHHHHHHHHHHHHHHhcccCCCChHHHHHHHHHHHHhHhHHHHHHHHhcCHHHHHHHHHHHHhc
Q 011164 404 EQGNTLFKAGKYARASKRYEKAVKYIEYDTSFGDEEKKQAKALKVACNLNNAACKLKLKDYKQAEKLCTKVQQQ 477 (492)
Q Consensus 404 ~~Gn~~fk~~~~~~A~~~Y~~al~~l~~~~~~~~~~~~~~~~~~~~l~~N~a~~~lk~~~~~~ai~~~~~al~~ 477 (492)
..|+-+|..|+|.+|+..+++.++.+....+ ......+|...+..|..++++.++...+++|...
T Consensus 104 kL~~l~~~~~~y~~a~~~i~~l~~~~~~~dd---------~~~llev~lle~~~~~~~~n~~k~k~~l~~a~~~ 168 (394)
T 3txn_A 104 RLIALYFDTALYTEALALGAQLLRELKKLDD---------KNLLVEVQLLESKTYHALSNLPKARAALTSARTT 168 (394)
T ss_dssp HHHHHHHHTTCHHHHHHHHHHHHHHHTTSSC---------THHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHhhhHHHHHHHHHHHHHHHhcccc---------chhHHHHHHHHHHHHHHhccHHHHHHHHHHHHhh
Confidence 4677889999999999999999998865321 4677888999999999999999999999988765
No 310
>3u64_A Protein TP_0956; tetratrico peptide repeat, protein-prote interaction, syphilis, lipoprotein, transport protein; 2.30A {Treponema pallidum subsp} PDB: 4di3_A 4di4_A*
Probab=72.48 E-value=3.2 Score=39.00 Aligned_cols=41 Identities=5% Similarity=-0.220 Sum_probs=34.5
Q ss_pred HHHhHhHHHHHHHHh-----cCHHHHHHHHHHHHhcCCCC-ccceee
Q 011164 447 KVACNLNNAACKLKL-----KDYKQAEKLCTKVQQQKKFL-LLPIFN 487 (492)
Q Consensus 447 ~~~l~~N~a~~~lk~-----~~~~~ai~~~~~al~~dp~n-~KA~~r 487 (492)
.-.+|.-++..|.++ |+.++|..++++||+++|++ ..+.|-
T Consensus 198 ~GsA~~~LG~lY~~vPp~~gGd~ekA~~~ferAL~LnP~~~id~~v~ 244 (301)
T 3u64_A 198 EGAVWNVLTKFYAAAPESFGGGMEKAHTAFEHLTRYCSAHDPDHHIT 244 (301)
T ss_dssp HHHHHHHHHHHHHHSCTTTTCCHHHHHHHHHHHHHHCCTTCSHHHHH
T ss_pred cCHHHHHHHHHHHhCCCccCCCHHHHHHHHHHHHHhCCCCCchHHHH
Confidence 456888899999996 99999999999999999974 655543
No 311
>4b4t_R RPN7, 26S proteasome regulatory subunit RPN7; hydrolase, AAA-atpases, protein degradation, ubiquitin-prote pathway; 7.40A {Saccharomyces cerevisiae}
Probab=69.37 E-value=3.9 Score=40.88 Aligned_cols=65 Identities=15% Similarity=0.055 Sum_probs=54.0
Q ss_pred HHHHhhhHHHHcccHHHHHHHHHHHHHHhcccCCCChHHHHHHHHHHHHhHhHHHHHHHHhcCHHHHHHHHHHHHhc
Q 011164 401 KKKEQGNTLFKAGKYARASKRYEKAVKYIEYDTSFGDEEKKQAKALKVACNLNNAACKLKLKDYKQAEKLCTKVQQQ 477 (492)
Q Consensus 401 ~~K~~Gn~~fk~~~~~~A~~~Y~~al~~l~~~~~~~~~~~~~~~~~~~~l~~N~a~~~lk~~~~~~ai~~~~~al~~ 477 (492)
.....|.-+++.|++..|++.|.++..+.... ..++.++.++..+++..++|..+....+++..+
T Consensus 133 ~~~~la~~~~~~Gd~~~A~~~~~~~~~~~~~~------------~~kid~~l~~irl~l~~~d~~~~~~~~~ka~~~ 197 (429)
T 4b4t_R 133 AWINLGEYYAQIGDKDNAEKTLGKSLSKAIST------------GAKIDVMLTIARLGFFYNDQLYVKEKLEAVNSM 197 (429)
T ss_dssp CCHHHHHHHHHHCCCTTHHHHHHHHHHHHTCC------------CSHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHcCCHHHHHHHHHHHHHhcCCh------------HHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHh
Confidence 35678999999999999999999988775432 235778889999999999999999999998654
No 312
>3eab_A Spastin; spastin, MIT, ESCRT, alternative splicing, ATP- binding, cytoplasm, disease mutation, hereditary spastic paraplegia, nucleotide-binding; 2.50A {Homo sapiens}
Probab=66.17 E-value=31 Score=25.89 Aligned_cols=67 Identities=18% Similarity=0.146 Sum_probs=47.6
Q ss_pred HHHHHHHHHhhhHHHHc---ccHHHHHHHHHHHHHHhccc----CCCChHHHHHHHHHHHHhHhHHHHHHHHhc
Q 011164 396 IEAAGKKKEQGNTLFKA---GKYARASKRYEKAVKYIEYD----TSFGDEEKKQAKALKVACNLNNAACKLKLK 462 (492)
Q Consensus 396 l~~a~~~K~~Gn~~fk~---~~~~~A~~~Y~~al~~l~~~----~~~~~~~~~~~~~~~~~l~~N~a~~~lk~~ 462 (492)
.+.|-.+..+|-..=.. |+-.+|+..|++++.-|... ..-..++++..+.++.....||..+.-++.
T Consensus 13 h~~AF~~Is~aL~~DE~~~~G~k~~A~~~YkkGi~eL~~Gi~V~~~g~G~~we~Ar~LQ~KM~~nL~~v~~RL~ 86 (89)
T 3eab_A 13 HKQAFEYISIALRIDEDEKAGQKEQAVEWYKKGIEELEKGIAVIVTGQGEQCERARRLQAKMMTNLVMAKDRLQ 86 (89)
T ss_dssp HHHHHHHHHHHHHHHHHSCSSSGGGSHHHHHHHHHHHHHHHHSCCCCCSHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhhhcccCCCHHHHHHHHHHHHHHHHhhcCCccCCCChhHHHHHHHHHHHHHHHHHHHHHHH
Confidence 34555555566555455 88889999999999887542 122457888889999999999888766653
No 313
>2ymb_A MITD1, MIT domain-containing protein 1; protein transport, membrane, PLD; 3.40A {Homo sapiens}
Probab=65.69 E-value=1.3 Score=40.77 Aligned_cols=64 Identities=16% Similarity=0.134 Sum_probs=0.0
Q ss_pred HHHHHHHHHHHhhhHHHHcccHHHHHHHHHHHHHHhcccCCC-ChHHHHHHHHHHHHhHhHHHHH
Q 011164 394 EKIEAAGKKKEQGNTLFKAGKYARASKRYEKAVKYIEYDTSF-GDEEKKQAKALKVACNLNNAAC 457 (492)
Q Consensus 394 e~l~~a~~~K~~Gn~~fk~~~~~~A~~~Y~~al~~l~~~~~~-~~~~~~~~~~~~~~l~~N~a~~ 457 (492)
..++.|..+-.+|.++=++|+|.+|+.+|+.|+.+|...... .++.....-..++.-|.+||-.
T Consensus 18 p~~~~Ai~lv~~AVe~D~~g~y~eAl~lY~eaIe~Ll~alk~e~d~~~k~~lr~Ki~eYl~RAE~ 82 (257)
T 2ymb_A 18 PQSTAAATVLKRAVELDSESRYPQALVCYQEGIDLLLQVLKGTKDNTKRCNLREKISKYMDRAEN 82 (257)
T ss_dssp -----------------------------------------------------------------
T ss_pred hhHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHH
Confidence 456778888889999999999999999999999988553221 1122233333444446666543
No 314
>3mkq_B Coatomer subunit alpha; beta-propeller, alpha-solenoid, transport protein; 2.50A {Saccharomyces cerevisiae}
Probab=64.43 E-value=17 Score=31.34 Aligned_cols=29 Identities=10% Similarity=0.001 Sum_probs=25.3
Q ss_pred HHHHHHhhhHHHHcccHHHHHHHHHHHHH
Q 011164 399 AGKKKEQGNTLFKAGKYARASKRYEKAVK 427 (492)
Q Consensus 399 a~~~K~~Gn~~fk~~~~~~A~~~Y~~al~ 427 (492)
-..+|..|..+.++|++.-|.++|+++=.
T Consensus 34 ~~~Wk~Lg~~AL~~gn~~lAe~cy~~~~D 62 (177)
T 3mkq_B 34 SITWERLIQEALAQGNASLAEMIYQTQHS 62 (177)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHTTC
T ss_pred HHHHHHHHHHHHHcCChHHHHHHHHHhCC
Confidence 34689999999999999999999998644
No 315
>2br9_A 14-3-3E, 14-3-3 protein epsilon; cell regulator protein, 14-3-3, phosphoserine, structural GE consortium, SGC, ywhae; HET: SEP; 1.75A {Homo sapiens} PDB: 3ual_A* 2o98_A* 3m50_A* 3m51_A* 3axy_C*
Probab=59.02 E-value=19 Score=32.54 Aligned_cols=54 Identities=13% Similarity=0.130 Sum_probs=42.4
Q ss_pred HHHHHHHHHHHHHhcccCCCChHHHHHHHHHHHHhHhHHHHHHHH-hcCHHHHHHHHHHHHh
Q 011164 416 ARASKRYEKAVKYIEYDTSFGDEEKKQAKALKVACNLNNAACKLK-LKDYKQAEKLCTKVQQ 476 (492)
Q Consensus 416 ~~A~~~Y~~al~~l~~~~~~~~~~~~~~~~~~~~l~~N~a~~~lk-~~~~~~ai~~~~~al~ 476 (492)
+.|...|++|+......-.. ..+.+.-+.+|.+..|.. +++.++|+.-+.+|+.
T Consensus 147 e~a~~aY~~A~~iA~~~L~p-------thPirLgLaLN~SVF~yEil~~~~~A~~lAk~afd 201 (234)
T 2br9_A 147 ENSLVAYKAASDIAMTELPP-------THPIRLGLALNFSVFYYEILNSPDRACRLAKAAFD 201 (234)
T ss_dssp HHHHHHHHHHHHHHHHHSCT-------TCHHHHHHHHHHHHHHHHTSCCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHccCCC-------CCcHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHH
Confidence 57888899999876432222 267889999999998887 7899999999998874
No 316
>2npm_A 14-3-3 domain containing protein; cell regulator protein 14-3-3, struc genomics, structural genomics consortium, SGC, protein BIND; HET: SEP; 2.52A {Cryptosporidium parvum}
Probab=57.52 E-value=25 Score=32.25 Aligned_cols=53 Identities=17% Similarity=0.204 Sum_probs=42.8
Q ss_pred HHHHHHHHHHHHHhcccCCCChHHHHHHHHHHHHhHhHHHHHHHH-hcCHHHHHHHHHHHHh
Q 011164 416 ARASKRYEKAVKYIEYDTSFGDEEKKQAKALKVACNLNNAACKLK-LKDYKQAEKLCTKVQQ 476 (492)
Q Consensus 416 ~~A~~~Y~~al~~l~~~~~~~~~~~~~~~~~~~~l~~N~a~~~lk-~~~~~~ai~~~~~al~ 476 (492)
+.|...|++|+... ..-..+ .+.+.-+.+|.+..|.. +++.++|+.-+.+|+.
T Consensus 173 e~a~~aY~~A~~iA-~~L~pt-------hPirLGLaLNfSVFyYEiln~~~~Ac~lAk~Afd 226 (260)
T 2npm_A 173 EDALKAYKDATVVA-KDLEPT-------HPIRLGLALNFSVFHYEILNEPRAAIDMAKEAFE 226 (260)
T ss_dssp HHHHHHHHHHHHHH-TTSCTT-------CHHHHHHHHHHHHHHHHTSCCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHH-HhCCCC-------CcHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHH
Confidence 57788899999887 432322 67889999999998887 8899999999998875
No 317
>3ly7_A Transcriptional activator CADC; alpha/beta domain, alpha domain, DNA-binding, transcription regulation, transmembrane; 1.80A {Escherichia coli} PDB: 3lya_A 3ly8_A 3ly9_A
Probab=55.68 E-value=83 Score=30.48 Aligned_cols=30 Identities=7% Similarity=-0.148 Sum_probs=25.1
Q ss_pred HhHHHHHHHHhcCHHHHHHHHHHHHhcCCC
Q 011164 451 NLNNAACKLKLKDYKQAEKLCTKVQQQKKF 480 (492)
Q Consensus 451 ~~N~a~~~lk~~~~~~ai~~~~~al~~dp~ 480 (492)
|.=+|.+++..+++++|+..+++||.++|+
T Consensus 280 ~~alal~~l~~gd~d~A~~~l~rAl~Ln~s 309 (372)
T 3ly7_A 280 YQIKAVSALVKGKTDESYQAINTGIDLEMS 309 (372)
T ss_dssp HHHHHHHHHHHTCHHHHHHHHHHHHHHCCC
T ss_pred HHHHHHHHHhCCCHHHHHHHHHHHHhcCCC
Confidence 334666777789999999999999999964
No 318
>3uzd_A 14-3-3 protein gamma; structural genomics, SGC, structural genomics consortium, MA alpha, phosphoserine, phosphothreonine; HET: SEP; 1.86A {Homo sapiens} PDB: 4e2e_A 2b05_A* 2c63_A* 2c74_A* 4dnk_A 4gnt_A 2bq0_A 2c23_A 2c1n_A* 2c1j_A* 2btp_A*
Probab=55.46 E-value=24 Score=32.16 Aligned_cols=54 Identities=15% Similarity=0.143 Sum_probs=42.0
Q ss_pred HHHHHHHHHHHHHhcccCCCChHHHHHHHHHHHHhHhHHHHHHHH-hcCHHHHHHHHHHHHh
Q 011164 416 ARASKRYEKAVKYIEYDTSFGDEEKKQAKALKVACNLNNAACKLK-LKDYKQAEKLCTKVQQ 476 (492)
Q Consensus 416 ~~A~~~Y~~al~~l~~~~~~~~~~~~~~~~~~~~l~~N~a~~~lk-~~~~~~ai~~~~~al~ 476 (492)
..|...|++|..+....-+. ..+.+.-+.+|.+.-|.. +++.++|+.-+.+|+.
T Consensus 148 ~~a~~aY~~A~~iA~~~L~p-------thPirLGLaLNfSVFyYEIln~~~~Ac~lAk~Afd 202 (248)
T 3uzd_A 148 ESSEKAYSEAHEISKEHMQP-------THPIRLGLALNYSVFYYEIQNAPEQACHLAKTAFD 202 (248)
T ss_dssp HHHHHHHHHHHHHHHHHSCT-------TCHHHHHHHHHHHHHHHHTSCCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHhhCCC-------CCcHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHH
Confidence 67788899999876432222 267889999999988777 7889999999888864
No 319
>1o9d_A 14-3-3-like protein C; protein-binding, fusicoccin, 14-3-3 family, activating drug; HET: TPO; 2.3A {Nicotiana tabacum} SCOP: a.118.7.1 PDB: 1o9c_A* 1o9e_A* 1o9f_A* 3e6y_A*
Probab=55.36 E-value=23 Score=32.48 Aligned_cols=54 Identities=13% Similarity=0.148 Sum_probs=41.8
Q ss_pred HHHHHHHHHHHHHhcccCCCChHHHHHHHHHHHHhHhHHHHHHHH-hcCHHHHHHHHHHHHh
Q 011164 416 ARASKRYEKAVKYIEYDTSFGDEEKKQAKALKVACNLNNAACKLK-LKDYKQAEKLCTKVQQ 476 (492)
Q Consensus 416 ~~A~~~Y~~al~~l~~~~~~~~~~~~~~~~~~~~l~~N~a~~~lk-~~~~~~ai~~~~~al~ 476 (492)
+.|...|++|.......-.. ..+.+.-+.+|.+..|.. +++.++|+.-+.+|+.
T Consensus 152 e~a~~aY~~A~~iA~~~L~p-------thPirLGLaLNfSVFyYEiln~~~~Ac~lAk~Afd 206 (260)
T 1o9d_A 152 ESTLTAYKAAQDIATTELAP-------THPIRLGLALNFSVFYYEILNSPDRACNLAKQAFD 206 (260)
T ss_dssp HHHHHHHHHHHHHHHHHSCT-------TCHHHHHHHHHHHHHHHHTSCCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHhcCCC-------CCcHHHHHHHHHHHHHHHHccCHHHHHHHHHHHHH
Confidence 56788899999876432222 267889999999998887 7889999998888863
No 320
>3ubw_A 14-3-3E, 14-3-3 protein epsilon; adapter protein, signaling protein, signaling protein-protei complex; HET: SEP; 1.90A {Homo sapiens}
Probab=55.03 E-value=24 Score=32.31 Aligned_cols=54 Identities=13% Similarity=0.130 Sum_probs=41.8
Q ss_pred HHHHHHHHHHHHHhcccCCCChHHHHHHHHHHHHhHhHHHHHHHH-hcCHHHHHHHHHHHHh
Q 011164 416 ARASKRYEKAVKYIEYDTSFGDEEKKQAKALKVACNLNNAACKLK-LKDYKQAEKLCTKVQQ 476 (492)
Q Consensus 416 ~~A~~~Y~~al~~l~~~~~~~~~~~~~~~~~~~~l~~N~a~~~lk-~~~~~~ai~~~~~al~ 476 (492)
+.|...|++|..+....-+. ..+.+.-+.+|.+.-|.. +++.++|+.-+.+|++
T Consensus 173 e~a~~aY~~A~~iA~~~L~p-------ThPirLGLaLNfSVFyYEIln~p~~Ac~LAk~AFd 227 (261)
T 3ubw_A 173 ENSLVAYKAASDIAMTELPP-------THPIRLGLALNFSVFYYEILNSPDRACRLAKAAFD 227 (261)
T ss_dssp HHHHHHHHHHHHHHHHHSCT-------TCHHHHHHHHHHHHHHHHTSCCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHhhCCC-------CCcHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHH
Confidence 56778899998875432222 267889999999998777 7899999999988864
No 321
>3iqu_A 14-3-3 protein sigma; signal transuction, nucleus, phosphoprotein, secreted, prote binding, signaling protein; HET: SEP; 1.05A {Homo sapiens} SCOP: a.118.7.1 PDB: 3iqj_A* 3iqv_A* 3mhr_A* 3lw1_A* 3o8i_A* 3p1n_A* 3p1o_A* 3t0l_A* 3t0m_A* 3u9x_A* 3ux0_A* 4dat_A* 4dau_A* 3p1s_A* 3p1r_A* 3smk_A* 3spr_A* 3p1q_A* 3p1p_A* 3sml_A* ...
Probab=51.53 E-value=27 Score=31.53 Aligned_cols=55 Identities=13% Similarity=0.173 Sum_probs=42.0
Q ss_pred HHHHHHHHHHHHHHhcccCCCChHHHHHHHHHHHHhHhHHHHHHHH-hcCHHHHHHHHHHHHh
Q 011164 415 YARASKRYEKAVKYIEYDTSFGDEEKKQAKALKVACNLNNAACKLK-LKDYKQAEKLCTKVQQ 476 (492)
Q Consensus 415 ~~~A~~~Y~~al~~l~~~~~~~~~~~~~~~~~~~~l~~N~a~~~lk-~~~~~~ai~~~~~al~ 476 (492)
-+.|...|++|.......-+. ..+.+.-+.+|.+.-|.. +++.++|+.-+.+|++
T Consensus 149 ~e~a~~aY~~A~~iA~~~L~p-------thPirLGLaLNfSVFyyEiln~~~~Ac~lAk~Afd 204 (236)
T 3iqu_A 149 IDSARSAYQEAMDISKKEMPP-------TNPIRLGLALNFSVFHYEIANSPEEAISLAKTTFD 204 (236)
T ss_dssp HHHHHHHHHHHHHHHHHHSCT-------TCHHHHHHHHHHHHHHHHTSSCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHhhCCC-------CCcHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHH
Confidence 367788899999876432222 267889999999998775 6889999999888864
No 322
>3efz_A 14-3-3 protein; 14-3-3, cell regulation, structural genom structural genomics consortium, SGC; HET: SEP; 2.08A {Cryptosporidium parvum} SCOP: a.118.7.1 PDB: 2ijp_A*
Probab=47.64 E-value=25 Score=32.35 Aligned_cols=57 Identities=25% Similarity=0.193 Sum_probs=43.3
Q ss_pred HHHHHHHHHHHHHhcccCCCChHHHHHHHHHHHHhHhHHHHHHHH-hcCHHHHHHHHHHHHhc
Q 011164 416 ARASKRYEKAVKYIEYDTSFGDEEKKQAKALKVACNLNNAACKLK-LKDYKQAEKLCTKVQQQ 477 (492)
Q Consensus 416 ~~A~~~Y~~al~~l~~~~~~~~~~~~~~~~~~~~l~~N~a~~~lk-~~~~~~ai~~~~~al~~ 477 (492)
+.|...|++|......... .....+.+.-+.+|.+..|.. +++.++|+.-+.+|++-
T Consensus 169 e~a~~aYq~A~eiA~~~L~-----~~pThPiRLGLaLNfSVFyYEIln~p~~Ac~lAk~AFde 226 (268)
T 3efz_A 169 KQAVEFYEDALQRERSFLE-----KYPSDPLYLATILNYTILKYDLLGNPEGAMKFANRAIQA 226 (268)
T ss_dssp HHHHHHHHHHHHHHHHHCT-----TGGGCHHHHHHHHHHHHHHHTTTCCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHhcC-----CCCCChHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHhh
Confidence 6778889999887542210 022367889999999998884 78999999999998764
No 323
>2ff4_A Probable regulatory protein EMBR; winged-helix, tetratricopeptide repeat, beta-sandwich, trans; HET: DNA TPO; 1.90A {Mycobacterium tuberculosis} SCOP: a.4.6.1 a.118.8.3 b.26.1.2 PDB: 2fez_A*
Probab=47.60 E-value=33 Score=33.50 Aligned_cols=60 Identities=7% Similarity=-0.058 Sum_probs=47.6
Q ss_pred HHHHHhhhHHHHcccHHHHHHHHHHHHHHhcccCCCChHHHHHHHHHHHHhHhHHHHHHHHhcCHHHHHHHHHHH
Q 011164 400 GKKKEQGNTLFKAGKYARASKRYEKAVKYIEYDTSFGDEEKKQAKALKVACNLNNAACKLKLKDYKQAEKLCTKV 474 (492)
Q Consensus 400 ~~~K~~Gn~~fk~~~~~~A~~~Y~~al~~l~~~~~~~~~~~~~~~~~~~~l~~N~a~~~lk~~~~~~ai~~~~~a 474 (492)
..+...+..+...|++.+|+....+++.. +++.-.+|.-+-.|+.+.|+..+|++.+.++
T Consensus 172 ~a~~~~~~~~l~~g~~~~a~~~l~~~~~~---------------~P~~E~~~~~lm~al~~~Gr~~~Al~~y~~~ 231 (388)
T 2ff4_A 172 LAHTAKAEAEIACGRASAVIAELEALTFE---------------HPYREPLWTQLITAYYLSDRQSDALGAYRRV 231 (388)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHHH---------------STTCHHHHHHHHHHHHTTTCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHCCCHHHHHHHHHHHHHh---------------CCCCHHHHHHHHHHHHHcCCHHHHHHHHHHH
Confidence 34556677778899999999998888865 3444567777888999999999999888765
No 324
>1zbp_A Hypothetical protein VPA1032; alpha-beta protein, structural genomics, PSI, protein struct initiative; 2.40A {Vibrio parahaemolyticus} SCOP: e.61.1.1
Probab=47.41 E-value=19 Score=33.22 Aligned_cols=64 Identities=11% Similarity=-0.018 Sum_probs=47.3
Q ss_pred hhHHHHcccHHHHHHHHHHHHHHhcccCCCChHHHHHHHHHHHHhHhHHHHHHHHhcCHHHHHHHHHHHHhcCCCCccc
Q 011164 406 GNTLFKAGKYARASKRYEKAVKYIEYDTSFGDEEKKQAKALKVACNLNNAACKLKLKDYKQAEKLCTKVQQQKKFLLLP 484 (492)
Q Consensus 406 Gn~~fk~~~~~~A~~~Y~~al~~l~~~~~~~~~~~~~~~~~~~~l~~N~a~~~lk~~~~~~ai~~~~~al~~dp~n~KA 484 (492)
.+.+++.++..+|+...+..+|--.. + ..+-.-+..-+.-.|+|+.|...++-+.+++|...+.
T Consensus 4 ~~~ll~~g~L~~al~~~~~~VR~~P~----d-----------a~~R~~LfqLLcv~G~w~RA~~QL~~~a~l~p~~~~~ 67 (273)
T 1zbp_A 4 WKNALSEGQLQQALELLIEAIKASPK----D-----------ASLRSSFIELLCIDGDFERADEQLMQSIKLFPEYLPG 67 (273)
T ss_dssp HHHHTTTTCHHHHHHHHHHHHHTCTT----C-----------HHHHHHHHHHHHHHTCHHHHHHHHHHHHHHCGGGHHH
T ss_pred HHHHHhCCCHHHHHHHHHHHHHhCCc----C-----------HHHHHHHHHHHHhcCCHHHHHHHHHHHHHhCchhhHH
Confidence 45788999999999999999986221 1 2222233344445799999999999999999987553
No 325
>2o8p_A 14-3-3 domain containing protein; signaling protein, 14-3-3, cell regulator protein, cryptospo parvum, structural genomics; HET: MSE; 1.82A {Cryptosporidium parvum} SCOP: a.118.7.1
Probab=47.12 E-value=17 Score=32.58 Aligned_cols=59 Identities=12% Similarity=0.020 Sum_probs=45.3
Q ss_pred cccHHHHHHHHHHHHHHhcccCCCChHHHHHHHHHHHHhHhHHHHHHHH-hcCHHHHHHHHHHHHhc
Q 011164 412 AGKYARASKRYEKAVKYIEYDTSFGDEEKKQAKALKVACNLNNAACKLK-LKDYKQAEKLCTKVQQQ 477 (492)
Q Consensus 412 ~~~~~~A~~~Y~~al~~l~~~~~~~~~~~~~~~~~~~~l~~N~a~~~lk-~~~~~~ai~~~~~al~~ 477 (492)
.|+-+.|...|+.|........ ....+.+.-+.+|.+..|.. +++.++|+.-+.+|+.+
T Consensus 138 ~g~~e~a~~aY~~A~~iA~~~L-------~pthPirLGLaLNfSVFyYEIln~p~~Ac~lAk~Afd~ 197 (227)
T 2o8p_A 138 LCSLEDSKKIHQDAFTLLCEHP-------DKIEQLPLGFIQNLAYILSEKYGEKKQVFNMLNSLGKI 197 (227)
T ss_dssp SSCHHHHHHHHHHHHHHHHHCG-------GGGGGSCHHHHHHHHHHHHHTSSCHHHHHHHHHHHHHH
T ss_pred cccHHHHHHHHHHHHHHHHhhC-------CCCChHHHHHHHHHHHHHHHHccCHHHHHHHHHHHHHH
Confidence 4556789999999998765321 22366778899999998775 77899999999999653
No 326
>3ax2_A Mitochondrial import receptor subunit TOM20 homol; protein-protein complex, membrane protein-transport protein; 1.90A {Rattus norvegicus} PDB: 2v1s_A 3awr_A 2v1t_A 3ax5_A 3ax3_A
Probab=43.91 E-value=36 Score=24.54 Aligned_cols=38 Identities=13% Similarity=0.187 Sum_probs=30.6
Q ss_pred HHHHHHHHHHHhhhHHHHcccHHHHHHHHHHHHHHhcc
Q 011164 394 EKIEAAGKKKEQGNTLFKAGKYARASKRYEKAVKYIEY 431 (492)
Q Consensus 394 e~l~~a~~~K~~Gn~~fk~~~~~~A~~~Y~~al~~l~~ 431 (492)
++-+.-.+--..|..+..+|++.+|+.++.+|++.+..
T Consensus 12 ~~e~~Fl~eV~~GE~L~~~g~~~~~~~hf~nAl~Vc~q 49 (73)
T 3ax2_A 12 AVQKFFLEEIQLGEELLAQGDYEKGVDHLTNAIAVCGQ 49 (73)
T ss_dssp HHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHTCSS
T ss_pred HHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHcCC
Confidence 44444556678899999999999999999999998654
No 327
>3kae_A CDC27, possible protein of nuclear scaffold; tetratricopeptide repeat protein, protein binding; 2.30A {Encephalitozoon cuniculi}
Probab=42.52 E-value=45 Score=28.59 Aligned_cols=26 Identities=31% Similarity=0.385 Sum_probs=22.7
Q ss_pred hHhHHHHHHHHhcCHHHHHHHHHHHH
Q 011164 450 CNLNNAACKLKLKDYKQAEKLCTKVQ 475 (492)
Q Consensus 450 l~~N~a~~~lk~~~~~~ai~~~~~al 475 (492)
...--++||.|+++|++|+.+.+..|
T Consensus 64 s~YYk~LCy~klKdYkkA~~~le~il 89 (242)
T 3kae_A 64 SKYYESLCYKKKKDYKKAIKSLESIL 89 (242)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 33447899999999999999999998
No 328
>2zan_A Vacuolar protein sorting-associating protein 4B; SKD1, VPS4B, AAA ATPase, ATP-binding, coiled coil, membrane, nucleotide-binding, phosphorylation; HET: ATP; 3.00A {Mus musculus} PDB: 2zam_A* 2zao_A* 2jqh_A 2jqk_A 1wr0_A 2jq9_A 2k3w_A 1yxr_A
Probab=42.06 E-value=5.4 Score=40.04 Aligned_cols=39 Identities=26% Similarity=0.296 Sum_probs=0.0
Q ss_pred HHHHHHHHHHHhhhHHHHcccHHHHHHHHHHHHHHhccc
Q 011164 394 EKIEAAGKKKEQGNTLFKAGKYARASKRYEKAVKYIEYD 432 (492)
Q Consensus 394 e~l~~a~~~K~~Gn~~fk~~~~~~A~~~Y~~al~~l~~~ 432 (492)
+.++.|..+-.+|.++-+.|+|++|+.+|+.|+.++...
T Consensus 6 ~~~~~A~~~~~~Av~~D~~g~~~eA~~~Y~~a~~~l~~~ 44 (444)
T 2zan_A 6 TNLQKAIDLASKAAQEDKAGNYEEALQLYQHAVQYFLHV 44 (444)
T ss_dssp ---------------------------------------
T ss_pred HHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHH
Confidence 456788888899999999999999999999999998653
No 329
>2yin_A DOCK2, dedicator of cytokinesis protein 2; apoptosis, DOCK, DOCK guanine nucleotide exchange factors; 2.70A {Homo sapiens} PDB: 3b13_A
Probab=38.56 E-value=91 Score=30.91 Aligned_cols=74 Identities=14% Similarity=0.147 Sum_probs=47.3
Q ss_pred HhhhHHHHcccHHHHHHHHHHHHHHhcccCCCC-----hH-HH--HHHHHHHHHhHhHHHHHHHHhcCHHHHHHHHHHHH
Q 011164 404 EQGNTLFKAGKYARASKRYEKAVKYIEYDTSFG-----DE-EK--KQAKALKVACNLNNAACKLKLKDYKQAEKLCTKVQ 475 (492)
Q Consensus 404 ~~Gn~~fk~~~~~~A~~~Y~~al~~l~~~~~~~-----~~-~~--~~~~~~~~~l~~N~a~~~lk~~~~~~ai~~~~~al 475 (492)
..++.+.+.++|.+|..++.....++..+.... .+ .. ......+..+|...+..+-+-+.|+.|+..|+..+
T Consensus 40 ~L~~~h~~~~ny~EAa~~l~lhA~l~~w~~~~~~~~~~~~~~~~~qt~~~~ke~L~~~~i~~f~kg~~~E~ai~l~k~L~ 119 (436)
T 2yin_A 40 KLRDLHLDCDNYTEAAYTLLLHTWLLKWSDEQCASQVMQTGQQHPQTHRQLKETLYETIIGYFDKGKMWEEAISLCKELA 119 (436)
T ss_dssp HHHHHHHHTTCHHHHHHHHHHHHTTCCSSCCC--------------CHHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHH
T ss_pred HHHHHHHHCcCHHHHHHHHHHHHHHhCCCccccCcccccCCCCccccHHHHHHHHHHHHHHHHHhcCcHHHHHHHHHHHH
Confidence 447777889999999999876666665432210 00 00 11123344566666666667778999999999987
Q ss_pred hc
Q 011164 476 QQ 477 (492)
Q Consensus 476 ~~ 477 (492)
.+
T Consensus 120 ~~ 121 (436)
T 2yin_A 120 EQ 121 (436)
T ss_dssp HH
T ss_pred HH
Confidence 54
No 330
>1om2_A Protein (mitochondrial import receptor subunit TOM20); mitochondrial protein import across outer membrane, receptor for presequences; NMR {Rattus norvegicus} SCOP: a.23.4.1
Probab=37.97 E-value=91 Score=23.67 Aligned_cols=41 Identities=15% Similarity=0.225 Sum_probs=33.8
Q ss_pred ChHHHHHHHHHHHHhhhHHHHcccHHHHHHHHHHHHHHhcc
Q 011164 391 NTEEKIEAAGKKKEQGNTLFKAGKYARASKRYEKAVKYIEY 431 (492)
Q Consensus 391 ~~~e~l~~a~~~K~~Gn~~fk~~~~~~A~~~Y~~al~~l~~ 431 (492)
+.+++-+.-.+--..|..+..+|++..|+..+.+|++.+..
T Consensus 12 d~e~~e~~Fl~eV~lGE~L~~~g~~e~av~Hf~nAl~Vc~q 52 (95)
T 1om2_A 12 DAEAVQKFFLEEIQLGEELLAQGDYEKGVDHLTNAIAVCGQ 52 (95)
T ss_dssp SHHHHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHSC
T ss_pred CHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHcCC
Confidence 45555566677788999999999999999999999998754
No 331
>2crb_A Nuclear receptor binding factor 2; NRBF-2, MIT domain, helix bundle, structural genomics, NPPSFA; NMR {Mus musculus} SCOP: a.7.16.1
Probab=34.80 E-value=59 Score=24.54 Aligned_cols=29 Identities=17% Similarity=0.053 Sum_probs=23.8
Q ss_pred HHHhHhHHHHHHHHhcCHHHHHHHHHHHH
Q 011164 447 KVACNLNNAACKLKLKDYKQAEKLCTKVQ 475 (492)
Q Consensus 447 ~~~l~~N~a~~~lk~~~~~~ai~~~~~al 475 (492)
....+.-+|-.+++.++|++||.+-.+|.
T Consensus 14 ~AH~~~RrAe~ll~~gkydeAIech~kAa 42 (97)
T 2crb_A 14 LAHQQSRRADRLLAAGKYEEAISCHRKAT 42 (97)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHHHHHHHH
T ss_pred hhhHhhhHHHHHHhcCCHHHHHHHHHHHH
Confidence 35567778899999999999999877765
No 332
>2ijq_A Hypothetical protein; structural genomics, PSI, protein structure initiative, NEW YORK SGX research center for structural genomics; 1.88A {Haloarcula marismortui} SCOP: a.246.2.1
Probab=33.77 E-value=1.4e+02 Score=25.15 Aligned_cols=69 Identities=16% Similarity=0.148 Sum_probs=45.5
Q ss_pred HHHhhhHHHHcccHHHHHHHHHHHHHHhcccCCCChHHHHHHHHHHHHhH-hHHHHHHHHhcCHHHHHHHHHHHHhc
Q 011164 402 KKEQGNTLFKAGKYARASKRYEKAVKYIEYDTSFGDEEKKQAKALKVACN-LNNAACKLKLKDYKQAEKLCTKVQQQ 477 (492)
Q Consensus 402 ~K~~Gn~~fk~~~~~~A~~~Y~~al~~l~~~~~~~~~~~~~~~~~~~~l~-~N~a~~~lk~~~~~~ai~~~~~al~~ 477 (492)
--..|-.+|..|+|-+|-...+.+-+-... .+ ++. .-.+.-+. .-.|..+++.+++..|...+.+++..
T Consensus 35 ~~~~~i~lFn~g~yfeaHEvLEe~W~~~~~---~~-~er---~~lqGLIQ~lAvAl~H~~rgN~~GA~~ll~~Al~~ 104 (161)
T 2ijq_A 35 AVVHGVRLYNSGEFHESHDCFEDEWYNYGR---GN-TES---KFLHGMVQVAAGAYKHFDFEDDDGMRSLFRTSLQY 104 (161)
T ss_dssp HHHHHHHHHHTTCHHHHHHHHHHHTTTTCS---SS-HHH---HHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHhCCCchHHHHHHHHHHHhcCC---Cc-hHH---HHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHH
Confidence 356788999999999999888877753211 11 111 11222223 33455566678999999999999874
No 333
>2cwy_A Hypothetical protein TTHA0068; structural genomics, conserved hypothetical protein, NPPSFA; 1.85A {Thermus thermophilus} SCOP: a.246.2.1 PDB: 2cxd_A
Probab=32.03 E-value=1.5e+02 Score=22.24 Aligned_cols=60 Identities=18% Similarity=0.093 Sum_probs=40.4
Q ss_pred HhhhHHHHcccHHHHHHHHHHHHHHhcccCCCChHHHHHHHHHHHHhHhHHHHHHH--HhcCHHHHHHHHHHHHh
Q 011164 404 EQGNTLFKAGKYARASKRYEKAVKYIEYDTSFGDEEKKQAKALKVACNLNNAACKL--KLKDYKQAEKLCTKVQQ 476 (492)
Q Consensus 404 ~~Gn~~fk~~~~~~A~~~Y~~al~~l~~~~~~~~~~~~~~~~~~~~l~~N~a~~~l--k~~~~~~ai~~~~~al~ 476 (492)
..|-.+|..|+|-+|-+..+..-+-.. .+ +.....-+.++|+++. +.+++ |...+.+++.
T Consensus 6 ~~~~~lfn~g~~~eaHEvlE~~W~~~~------~~-----~~~~~qGLIq~Ava~~h~~~gn~--a~~ll~~a~~ 67 (94)
T 2cwy_A 6 EEVLGLWRAGRYYEVHEVLEPYWLKAT------GE-----ERRLLQGVILLAAALHQRRLGRP--GLRNLRKAEA 67 (94)
T ss_dssp HHHHHHHHTTCHHHHHHHHHHHHHHCC------HH-----HHHHHHHHHHHHHHHHHHHTTCC--CHHHHHHHHH
T ss_pred HHHHHHHhCCChHHHHHHHHHHHhhCC------Cc-----hHHHHHHHHHHHHHHHHHHcCcH--HHHHHHHHHH
Confidence 468889999999999999888876531 11 1222333444555444 56677 8888999876
No 334
>4b4t_P 26S proteasome regulatory subunit RPN5; hydrolase, AAA-atpases, protein degradation, ubiquitin-prote pathway; 7.40A {Saccharomyces cerevisiae}
Probab=30.89 E-value=2.4e+02 Score=27.81 Aligned_cols=68 Identities=19% Similarity=0.089 Sum_probs=50.6
Q ss_pred HHHHHHhhhHHHHcccHHHHHHHHHHHHHHhcccCCCChHHHHHHHHHHHHhHhHHHHHHHHhcCHHHHHHHHHHHH
Q 011164 399 AGKKKEQGNTLFKAGKYARASKRYEKAVKYIEYDTSFGDEEKKQAKALKVACNLNNAACKLKLKDYKQAEKLCTKVQ 475 (492)
Q Consensus 399 a~~~K~~Gn~~fk~~~~~~A~~~Y~~al~~l~~~~~~~~~~~~~~~~~~~~l~~N~a~~~lk~~~~~~ai~~~~~al 475 (492)
+.-....++-++.+|+|.+|....+....-.... .+ ...++.+++-....++..++|.+|....+++.
T Consensus 137 arl~~~La~i~e~~g~~~eA~~iL~~l~~Et~~~--~~-------~~~kve~~l~q~rl~l~~~d~~~a~~~~~ki~ 204 (445)
T 4b4t_P 137 ARVTKDLVEIKKEEGKIDEAADILCELQVETYGS--ME-------MSEKIQFILEQMELSILKGDYSQATVLSRKIL 204 (445)
T ss_dssp HHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHCSS--SC-------HHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHccCHHHHHHHHHHHHHHHHhc--cc-------HHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHH
Confidence 3344556777888999999999888876543211 11 34567777888889999999999999999874
No 335
>4b4t_P 26S proteasome regulatory subunit RPN5; hydrolase, AAA-atpases, protein degradation, ubiquitin-prote pathway; 7.40A {Saccharomyces cerevisiae}
Probab=29.99 E-value=2.7e+02 Score=27.35 Aligned_cols=71 Identities=17% Similarity=0.150 Sum_probs=50.8
Q ss_pred HHHHHHhhhHHHHcccHHHHHHHHHHHHHHhcccCCCChHHHHHHHHHHHHhHhHHHHHHHHhcCHHHHHHHHHHHHhc
Q 011164 399 AGKKKEQGNTLFKAGKYARASKRYEKAVKYIEYDTSFGDEEKKQAKALKVACNLNNAACKLKLKDYKQAEKLCTKVQQQ 477 (492)
Q Consensus 399 a~~~K~~Gn~~fk~~~~~~A~~~Y~~al~~l~~~~~~~~~~~~~~~~~~~~l~~N~a~~~lk~~~~~~ai~~~~~al~~ 477 (492)
+.-+-.+..-++..++|.+|...++++.......... ..++...+.=.+..+...++|.+|-.++-++++.
T Consensus 177 ve~~l~q~rl~l~~~d~~~a~~~~~ki~~~~~~~~~~--------~~lk~~~~~~~~~~~~~e~~y~~a~~~y~e~~~~ 247 (445)
T 4b4t_P 177 IQFILEQMELSILKGDYSQATVLSRKILKKTFKNPKY--------ESLKLEYYNLLVKISLHKREYLEVAQYLQEIYQT 247 (445)
T ss_dssp HHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHSSCC--------HHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHCCCHHHHHHHHHHHHHhhcccCCc--------HHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHhc
Confidence 3344456667788999999999999986433322211 3466667777788888888999998888888764
No 336
>2uy1_A Cleavage stimulation factor 77; RNA-binding protein; 2.0A {Encephalitozoon cuniculi} PDB: 2uy1_B
Probab=29.39 E-value=42 Score=33.85 Aligned_cols=34 Identities=12% Similarity=0.266 Sum_probs=29.5
Q ss_pred HHHHHHHHHhhhHHHHcccHHHHHHHHHHHHHHh
Q 011164 396 IEAAGKKKEQGNTLFKAGKYARASKRYEKAVKYI 429 (492)
Q Consensus 396 l~~a~~~K~~Gn~~fk~~~~~~A~~~Y~~al~~l 429 (492)
+..|..+.+++-..|-.++++.|...|++|+..+
T Consensus 11 i~~aR~vyer~l~~~P~~~~e~~~~iferal~~~ 44 (493)
T 2uy1_A 11 LSSPSAIMEHARRLYMSKDYRSLESLFGRCLKKS 44 (493)
T ss_dssp -CCHHHHHHHHHHHHHTTCHHHHHHHHHHHSTTC
T ss_pred hHHHHHHHHHHHHHCCCCCHHHHHHHHHHHhccC
Confidence 5568888899999999999999999999999854
No 337
>2xze_A STAM-binding protein; hydrolase-protein transport complex; 1.75A {Homo sapiens}
Probab=28.45 E-value=1.1e+02 Score=25.27 Aligned_cols=41 Identities=12% Similarity=0.139 Sum_probs=37.0
Q ss_pred CCChHHHHHHHHHHHHhhhHHHHcccHHHHHHHHHHHHHHh
Q 011164 389 DMNTEEKIEAAGKKKEQGNTLFKAGKYARASKRYEKAVKYI 429 (492)
Q Consensus 389 ~~~~~e~l~~a~~~K~~Gn~~fk~~~~~~A~~~Y~~al~~l 429 (492)
..++...+..|..+..+|..+...|++..|.-.|-+.+.++
T Consensus 30 ~i~l~~ylrta~~llr~A~~y~~egd~e~AYily~R~~~L~ 70 (146)
T 2xze_A 30 DIPPRRYFRSGVEIIRMASIYSEEGNIEHAFILYNKYITLF 70 (146)
T ss_dssp TSCHHHHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHH
T ss_pred CCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHH
Confidence 44677889999999999999999999999999999988776
No 338
>4e6h_A MRNA 3'-END-processing protein RNA14; HAT domain, heat repeat, CLP1, PCF11, structural protein; 2.30A {Kluyveromyces lactis} PDB: 4e85_A 4eba_A
Probab=28.15 E-value=85 Score=33.16 Aligned_cols=63 Identities=5% Similarity=-0.014 Sum_probs=47.1
Q ss_pred HHcccHHHHHHHHHHHHHHhcccCCCChHHHHHHHHHHHHhHhHHHHHHHHhcC---HHHHHHHHHHHHhcCC--CCccc
Q 011164 410 FKAGKYARASKRYEKAVKYIEYDTSFGDEEKKQAKALKVACNLNNAACKLKLKD---YKQAEKLCTKVQQQKK--FLLLP 484 (492)
Q Consensus 410 fk~~~~~~A~~~Y~~al~~l~~~~~~~~~~~~~~~~~~~~l~~N~a~~~lk~~~---~~~ai~~~~~al~~dp--~n~KA 484 (492)
-+.+++..|...|.+++..+.. ...++..-+..-++.++ +..+...++++|..-| .+++.
T Consensus 77 ~~~~~~~~aR~vyEraL~~fP~---------------~~~lW~~Yi~~E~~~~~~~~~~~v~~lfeRal~~~~~~~sv~L 141 (679)
T 4e6h_A 77 VSLKQWKQVYETFDKLHDRFPL---------------MANIWCMRLSLEFDKMEELDAAVIEPVLARCLSKELGNNDLSL 141 (679)
T ss_dssp HHTTCHHHHHHHHHHHHHHCTT---------------CHHHHHHHHHHHHTC--CCCHHHHHHHHHHHTCSSSCCCCHHH
T ss_pred HhcCcHHHHHHHHHHHHHHCCC---------------CHHHHHHHHHHHHhhCCcchHHHHHHHHHHHHHhcCCCCCHHH
Confidence 3457899999999999998543 25667777777778888 9999999999999884 56665
Q ss_pred eee
Q 011164 485 IFN 487 (492)
Q Consensus 485 ~~r 487 (492)
|..
T Consensus 142 W~~ 144 (679)
T 4e6h_A 142 WLS 144 (679)
T ss_dssp HHH
T ss_pred HHH
Confidence 443
No 339
>3lpz_A GET4 (YOR164C homolog); protein targeting, tail-anchored protein biogenesis, GET PAT GET5 binding, protein transport; 1.98A {Chaetomium thermophilum}
Probab=26.84 E-value=4.1e+02 Score=25.12 Aligned_cols=79 Identities=15% Similarity=0.119 Sum_probs=0.0
Q ss_pred HHHHHHHHHHHHhhhHHHHcccHHHHHHHHHHHHHHh---------------------cccCCCChHHHHHHHHHHHH--
Q 011164 393 EEKIEAAGKKKEQGNTLFKAGKYARASKRYEKAVKYI---------------------EYDTSFGDEEKKQAKALKVA-- 449 (492)
Q Consensus 393 ~e~l~~a~~~K~~Gn~~fk~~~~~~A~~~Y~~al~~l---------------------~~~~~~~~~~~~~~~~~~~~-- 449 (492)
+|..+.-..+|-..|.+.++++|.+|+..-..+...+ +...+.+++....+.++...
T Consensus 29 ~~~YEAHQ~~RTi~~Ry~~~k~y~eAidLL~~GA~~ll~~~Q~~sg~DL~~llvevy~~~~~~~~~~~~~rL~~L~~~~~ 108 (336)
T 3lpz_A 29 EEQYEAAQETRLVAARYSKQGNWAAAVDILASVSQTLLRSGQGGSGGDLAVLLVDTFRQAGQRVDGASRGKLLGCLRLFQ 108 (336)
T ss_dssp HHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHTCCCCHHHHHHHHHHHTTSC
T ss_pred ccccHHHHHHHHHHHHHHhhcCHHHHHHHHHHHHHHHHHCCCcchHHHHHHHHHHHHHHcCCCCCHHHHHHHHHHHHhCC
Q ss_pred -----------------------------hHhHHHHHHHHhcCHHHHHHHH
Q 011164 450 -----------------------------CNLNNAACKLKLKDYKQAEKLC 471 (492)
Q Consensus 450 -----------------------------l~~N~a~~~lk~~~~~~ai~~~ 471 (492)
++.-+|..+.+.++|.+|..++
T Consensus 109 ~~~p~r~~fi~~ai~WS~~~g~~~~Gdp~LH~~ig~~~~~e~~~~~Ae~H~ 159 (336)
T 3lpz_A 109 PGEPVRKRFVKEMIDWSKKFGDYPAGDPELHHVVGTLYVEEGEFEAAEKHL 159 (336)
T ss_dssp TTCHHHHHHHHHHHHHHHHHSSCTTCCHHHHHHHHHHHHHTTCHHHHHHHH
T ss_pred CCCcHHHHHHHHHHHHHhhcCCCCCCCHHHHHHHHHHHHccCCHHHHHHHH
No 340
>2oo2_A Hypothetical protein AF_1782; structural genomics, unknown function, PSI-2, protein struct initiative; 1.80A {Archaeoglobus fulgidus dsm 4304} SCOP: a.8.11.1
Probab=26.73 E-value=1.4e+02 Score=22.20 Aligned_cols=38 Identities=13% Similarity=0.098 Sum_probs=32.4
Q ss_pred hHHHHHHHHHHHHhhhHHHHcccHHHHHHHHHHHHHHh
Q 011164 392 TEEKIEAAGKKKEQGNTLFKAGKYARASKRYEKAVKYI 429 (492)
Q Consensus 392 ~~e~l~~a~~~K~~Gn~~fk~~~~~~A~~~Y~~al~~l 429 (492)
..+.++.|..+.+.|..++++|++..|+.++.=|--+|
T Consensus 28 a~~~l~mA~~Y~~Da~~fl~kGD~v~Ala~isYa~GwL 65 (86)
T 2oo2_A 28 DEGFMRNIEAYISDSRYFLEKGDLVRAFECVVWAWAWL 65 (86)
T ss_dssp CHHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHH
Confidence 46788999999999999999999999999877666554
No 341
>2pmr_A Uncharacterized protein; structural genomics, unknown function, PSI-2, protein struct initiative; 1.32A {Methanothermobacter thermautotrophicusorganism_taxid} SCOP: a.8.11.1
Probab=25.36 E-value=1.5e+02 Score=22.06 Aligned_cols=38 Identities=13% Similarity=0.073 Sum_probs=31.2
Q ss_pred hHHHHHHHHHHHHhhhHHHHcccHHHHHHHHHHHHHHh
Q 011164 392 TEEKIEAAGKKKEQGNTLFKAGKYARASKRYEKAVKYI 429 (492)
Q Consensus 392 ~~e~l~~a~~~K~~Gn~~fk~~~~~~A~~~Y~~al~~l 429 (492)
..+.++.|....+.|..++++|++..|+.++.=|--+|
T Consensus 32 a~~~l~mA~~Y~~Da~~fl~kGD~v~Ala~isYa~GwL 69 (87)
T 2pmr_A 32 EEAVVERALNYRDDSVYYLEKGDHITSFGCITYAHGLL 69 (87)
T ss_dssp HHHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHH
Confidence 35678899999999999999999999998876655443
No 342
>3myv_A SUSD superfamily protein; RAGB, SUSD and hypothetical proteins, structural genomics, J center for structural genomics, JCSG; HET: MSE; 1.80A {Bacteroides vulgatus}
Probab=25.17 E-value=88 Score=31.06 Aligned_cols=30 Identities=20% Similarity=0.100 Sum_probs=24.0
Q ss_pred HHhHhHHHHHHHHhcCHHHHHHHHHHHHhc
Q 011164 448 VACNLNNAACKLKLKDYKQAEKLCTKVQQQ 477 (492)
Q Consensus 448 ~~l~~N~a~~~lk~~~~~~ai~~~~~al~~ 477 (492)
..++.=+|.+||-+++|++|+..|++|+..
T Consensus 190 ~aa~allarvyL~~~~~~~A~~~a~~vi~~ 219 (454)
T 3myv_A 190 YAARALLARIYLYHDDNRKAFDLADQLIKD 219 (454)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhcccHHHHHHHHHHHHhC
Confidence 344555777888889999999999999863
No 343
>2wpv_A GET4, UPF0363 protein YOR164C; golgi-ER trafficking, tail-anchored protein, protein binding GET4; 1.99A {Saccharomyces cerevisiae} PDB: 3lku_A
Probab=24.70 E-value=3.7e+02 Score=25.13 Aligned_cols=66 Identities=18% Similarity=0.079 Sum_probs=33.1
Q ss_pred HHHHhhhHHHHcccHHHHHHHHHHHHHHhcccCCCChHHHHHHHHHHHHhHhHHHHHHHHhcCHHHHHHHHHHHH
Q 011164 401 KKKEQGNTLFKAGKYARASKRYEKAVKYIEYDTSFGDEEKKQAKALKVACNLNNAACKLKLKDYKQAEKLCTKVQ 475 (492)
Q Consensus 401 ~~K~~Gn~~fk~~~~~~A~~~Y~~al~~l~~~~~~~~~~~~~~~~~~~~l~~N~a~~~lk~~~~~~ai~~~~~al 475 (492)
+...+-.....+|+|-+|.+.|+-...-+-.... -...+.++.+-|..+++.+++.-|.+-|...+
T Consensus 15 r~l~rl~~~I~~G~yYEAhQ~~Rtl~~Ry~~~~~---------~~eAidlL~~ga~~ll~~~Q~~sa~DLa~llv 80 (312)
T 2wpv_A 15 KTLQRFENKIKAGDYYEAHQTLRTIANRYVRSKS---------YEHAIELISQGALSFLKAKQGGSGTDLIFYLL 80 (312)
T ss_dssp HHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHTTC---------HHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHH
T ss_pred HHHHHHHHHhhccChHHHHHHHHHHHHHHHHhcC---------HHHHHHHHHHHHHHHHHCCCcchHHHHHHHHH
Confidence 3344444555566666666666544422211000 12334555566666666666666665544333
No 344
>3kez_A Putative sugar binding protein; structural genomics, joint C structural genomics, JCSG, protein structure initiative; 1.90A {Bacteroides vulgatus atcc 8482}
Probab=23.85 E-value=97 Score=30.83 Aligned_cols=30 Identities=13% Similarity=0.039 Sum_probs=23.7
Q ss_pred HHhHhHHHHHHHHhcCHHHHHHHHHHHHhc
Q 011164 448 VACNLNNAACKLKLKDYKQAEKLCTKVQQQ 477 (492)
Q Consensus 448 ~~l~~N~a~~~lk~~~~~~ai~~~~~al~~ 477 (492)
..++.=+|.+||-+++|++|+..|++|+..
T Consensus 196 ~aa~allArvyL~~~~~~~A~~~a~~vi~~ 225 (461)
T 3kez_A 196 WAAMTLLSRVYLYKGEYNEALTMAENAIKG 225 (461)
T ss_dssp HHHHHHHHHHHHHHTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhCCHHHHHHHHHHHHhc
Confidence 344445677788889999999999999863
No 345
>3htx_A HEN1; HEN1, small RNA methyltransferase, protein-RNA complex; HET: SAH; 3.10A {Arabidopsis thaliana}
Probab=23.79 E-value=1.2e+02 Score=33.01 Aligned_cols=58 Identities=26% Similarity=0.445 Sum_probs=46.4
Q ss_pred CCCCCCEEEEEEEEEec-CCC-------------------------------EEeecCCCCCcEEEEcCCCcccHhHHHH
Q 011164 52 TPENGDEVEVHYTGTLL-DGT-------------------------------QFDSSRDRSTPFKFTLGQGNVIKGWDIG 99 (492)
Q Consensus 52 ~~~~gd~V~v~Y~~~~~-dg~-------------------------------~~~ss~~~~~p~~f~lg~~~~~~gle~~ 99 (492)
.+..|+.|.|.|+..+. +|+ .+++. .-+.|.+|.+.+.+-++..
T Consensus 560 ~i~~gs~~~~~y~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ies~----~e~~fe~g~g~~~~~le~v 635 (950)
T 3htx_A 560 SITNGSVVSICYSLSLAVDPEYSSDGESPREDNESNEEMESEYSANCESSVEPIESN----EEIEFEVGTGSMNPHIESE 635 (950)
T ss_dssp CCCTTEEEEEEEEEEEEECC----------------------------CCCEEEEEE----EEEEEEETTTCBCHHHHHH
T ss_pred ccCCCcEEEEEEEEEEEecCcccccccccccccccccccccccccchhhhhhccccc----HHHHHHHhcCCccchhhhe
Confidence 46799999999998775 332 12221 3578999999999999999
Q ss_pred hccCcCccEEEEEe
Q 011164 100 IKTMKKGENAVFTI 113 (492)
Q Consensus 100 l~~m~~Ge~~~~~i 113 (492)
+.-|..|+...|..
T Consensus 636 V~qms~gqT~~F~~ 649 (950)
T 3htx_A 636 VTQMTVGEYASFKM 649 (950)
T ss_dssp HTTCCTTCEEEEEE
T ss_pred eeeccccceeEEec
Confidence 99999999998884
No 346
>2jpu_A ORF C02003 protein; solution structure, SSR10, NESG, structural genomics, PSI-2, protein structure initiative; NMR {Sulfolobus solfataricus} PDB: 2q00_A
Probab=22.08 E-value=71 Score=25.78 Aligned_cols=32 Identities=22% Similarity=0.329 Sum_probs=26.8
Q ss_pred HHHHHHHHhhhHHHHcccHHHHHHHHHHHHHH
Q 011164 397 EAAGKKKEQGNTLFKAGKYARASKRYEKAVKY 428 (492)
Q Consensus 397 ~~a~~~K~~Gn~~fk~~~~~~A~~~Y~~al~~ 428 (492)
+.|..+.+.|.+++.+|+..+|.++|=+|...
T Consensus 5 ~lAe~yL~EA~ell~kGD~vQAsEK~ykAaee 36 (129)
T 2jpu_A 5 TSAEVYYEEAEEFLSKGDLVQACEKYYKAAEE 36 (129)
T ss_dssp CHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHH
Confidence 45778889999999999999999998777653
No 347
>4a5x_A MITD1, MIT domain-containing protein 1; protein transport, ESCRT, cytokinesis, midbody; HET: P15; 1.91A {Homo sapiens}
Probab=21.29 E-value=1.5e+02 Score=21.81 Aligned_cols=27 Identities=19% Similarity=-0.065 Sum_probs=15.3
Q ss_pred HhHHHHHHHHhcCHHHHHHHHHHHHhc
Q 011164 451 NLNNAACKLKLKDYKQAEKLCTKVQQQ 477 (492)
Q Consensus 451 ~~N~a~~~lk~~~~~~ai~~~~~al~~ 477 (492)
+...|.-.=+.++|++|+..+..++++
T Consensus 19 lv~~Ave~D~~g~y~eAl~lY~~Aie~ 45 (86)
T 4a5x_A 19 VLKRAVELDSESRYPQALVCYQEGIDL 45 (86)
T ss_dssp HHHHHHHHHHTTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHcCCHHHHHHHHHHHHHH
Confidence 344455555566666666666665543
No 348
>3txn_A 26S proteasome regulatory complex subunit P42B; PCI domain, alpha solenoid, regulatory PART LID, hydrolase, protein binding; 2.50A {Drosophila melanogaster} PDB: 3txm_A
Probab=21.14 E-value=4.5e+02 Score=25.43 Aligned_cols=65 Identities=12% Similarity=0.045 Sum_probs=47.7
Q ss_pred HhhhHHHHcccHHHHHHHHHHHHHHhcccCCCChHHHHHHHHHHHHhHhHHHHHHH-HhcCHHHHHHHHHHHHh
Q 011164 404 EQGNTLFKAGKYARASKRYEKAVKYIEYDTSFGDEEKKQAKALKVACNLNNAACKL-KLKDYKQAEKLCTKVQQ 476 (492)
Q Consensus 404 ~~Gn~~fk~~~~~~A~~~Y~~al~~l~~~~~~~~~~~~~~~~~~~~l~~N~a~~~l-k~~~~~~ai~~~~~al~ 476 (492)
.+..-++..+|+.+|.+.|++|....+..... ..+...+..=-+..++ ..++|+.|-.++-++++
T Consensus 144 le~~~~~~~~n~~k~k~~l~~a~~~~~ai~~~--------p~i~a~i~~~~Gi~~l~~~rdyk~A~~~F~eaf~ 209 (394)
T 3txn_A 144 LESKTYHALSNLPKARAALTSARTTANAIYCP--------PKVQGALDLQSGILHAADERDFKTAFSYFYEAFE 209 (394)
T ss_dssp HHHHHHHHTTCHHHHHHHHHHHHHHHHHSCCC--------HHHHHHHHHHHHHHHHHTTSCHHHHHHHHHHHHH
T ss_pred HHHHHHHHhccHHHHHHHHHHHHhhhccCCCC--------HHHHHHHHHHhhHHHHHhccCHHHHHHHHHHHHh
Confidence 34455678899999999999999876542111 2344555556677888 89999999999998874
No 349
>3mcx_A SUSD superfamily protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE GOL; 1.49A {Bacteroides thetaiotaomicron}
Probab=20.98 E-value=98 Score=30.91 Aligned_cols=30 Identities=20% Similarity=0.206 Sum_probs=24.1
Q ss_pred HHhHhHHHHHHHHhcCHHHHHHHHHHHHhc
Q 011164 448 VACNLNNAACKLKLKDYKQAEKLCTKVQQQ 477 (492)
Q Consensus 448 ~~l~~N~a~~~lk~~~~~~ai~~~~~al~~ 477 (492)
..++.=+|.+||-+++|++|+..|++|+..
T Consensus 202 ~aa~allarvyL~~~~~~~A~~~a~~vi~~ 231 (477)
T 3mcx_A 202 WAAQALLSRVYLNMGEYQKAYDAATDVIKN 231 (477)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhcCHHHHHHHHHHHHhC
Confidence 344445677888889999999999999975
No 350
>2uy1_A Cleavage stimulation factor 77; RNA-binding protein; 2.0A {Encephalitozoon cuniculi} PDB: 2uy1_B
Probab=20.86 E-value=1.9e+02 Score=28.87 Aligned_cols=35 Identities=6% Similarity=0.005 Sum_probs=31.0
Q ss_pred HHhHhHHHHHHHHhcCHHHHHHHHHHHHhcCCCCcc
Q 011164 448 VACNLNNAACKLKLKDYKQAEKLCTKVQQQKKFLLL 483 (492)
Q Consensus 448 ~~l~~N~a~~~lk~~~~~~ai~~~~~al~~dp~n~K 483 (492)
..++.+.|.-+...++.+.|...+.+|+.. |.+..
T Consensus 213 ~~lW~~ya~~~~~~~~~~~ar~i~erAi~~-P~~~~ 247 (493)
T 2uy1_A 213 EEVYFFYSEYLIGIGQKEKAKKVVERGIEM-SDGMF 247 (493)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHH-CCSSH
T ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHhC-CCcHH
Confidence 677888999889999999999999999999 88753
No 351
>3re2_A Predicted protein; menin, multiple endocrine neoplasia 1, tumor suppressor, MIX lineage leukemia, unknown function; 1.95A {Nematostella vectensis}
Probab=20.82 E-value=1.8e+02 Score=28.05 Aligned_cols=31 Identities=16% Similarity=0.078 Sum_probs=26.4
Q ss_pred HhhhHHHHcccHHHHHHHHHHHHHHhcccCC
Q 011164 404 EQGNTLFKAGKYARASKRYEKAVKYIEYDTS 434 (492)
Q Consensus 404 ~~Gn~~fk~~~~~~A~~~Y~~al~~l~~~~~ 434 (492)
=.|.-+|+.++|++|++.|..|-..+....-
T Consensus 301 ylgGy~yR~~~~reAl~~WA~Aa~Vi~~YNY 331 (472)
T 3re2_A 301 YLGGYYYRKKKYYEAIASWVDAGYVAGKYNY 331 (472)
T ss_dssp HHHHHHHHTTCHHHHHHHHHHHHHHHTTSCC
T ss_pred hhhhhhhhcchHHHHHHHHHHHHHHHHHcCC
Confidence 4677889999999999999999998876543
No 352
>3mkq_A Coatomer beta'-subunit; beta-propeller, alpha-solenoid, transport protein; 2.50A {Saccharomyces cerevisiae} PDB: 2ynp_A
Probab=20.73 E-value=78 Score=33.45 Aligned_cols=27 Identities=15% Similarity=-0.028 Sum_probs=21.8
Q ss_pred HHhHhHHHHHHHHhcCHHHHHHHHHHH
Q 011164 448 VACNLNNAACKLKLKDYKQAEKLCTKV 474 (492)
Q Consensus 448 ~~l~~N~a~~~lk~~~~~~ai~~~~~a 474 (492)
..++.++|..+++.++++.|++++.++
T Consensus 681 ~~~W~~la~~al~~~~~~~A~~~y~~~ 707 (814)
T 3mkq_A 681 EMKWRALGDASLQRFNFKLAIEAFTNA 707 (814)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHH
T ss_pred HhHHHHHHHHHHHcCCHHHHHHHHHHc
Confidence 357788888888888888888888775
No 353
>4e6h_A MRNA 3'-END-processing protein RNA14; HAT domain, heat repeat, CLP1, PCF11, structural protein; 2.30A {Kluyveromyces lactis} PDB: 4e85_A 4eba_A
Probab=20.33 E-value=1.4e+02 Score=31.39 Aligned_cols=52 Identities=6% Similarity=-0.073 Sum_probs=38.5
Q ss_pred HcccHHHHH-HHHHHHHHHhcccCCCChHHHHHHHHHHHHhHhHHHHHHHHhcCHHHHHHHHHHHHhc
Q 011164 411 KAGKYARAS-KRYEKAVKYIEYDTSFGDEEKKQAKALKVACNLNNAACKLKLKDYKQAEKLCTKVQQQ 477 (492)
Q Consensus 411 k~~~~~~A~-~~Y~~al~~l~~~~~~~~~~~~~~~~~~~~l~~N~a~~~lk~~~~~~ai~~~~~al~~ 477 (492)
+.++...|+ ..|.+|+..+.. ...++.+.|....+.+++++|...++++|+.
T Consensus 355 ~~~~~~~a~r~il~rAi~~~P~---------------s~~Lwl~~a~~ee~~~~~e~aR~iyek~l~~ 407 (679)
T 4e6h_A 355 EKNTDSTVITKYLKLGQQCIPN---------------SAVLAFSLSEQYELNTKIPEIETTILSCIDR 407 (679)
T ss_dssp HHSCCTTHHHHHHHHHHHHCTT---------------CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH
T ss_pred hcCcHHHHHHHHHHHHHHhCCC---------------CHHHHHHHHHHHHHhCCHHHHHHHHHHHHHH
Confidence 445555665 667777665332 2567888999999999999999999999875
No 354
>2rpa_A Katanin P60 ATPase-containing subunit A1; AAA ATPase, ATP-binding, cell cycle, cell division, cytoplas hydrolase, microtubule; NMR {Mus musculus}
Probab=20.22 E-value=91 Score=22.70 Aligned_cols=39 Identities=15% Similarity=0.203 Sum_probs=27.5
Q ss_pred CCChHHHHHHHHHHHHhhhHHHHcccHHHHHHHHHHHHHHhcc
Q 011164 389 DMNTEEKIEAAGKKKEQGNTLFKAGKYARASKRYEKAVKYIEY 431 (492)
Q Consensus 389 ~~~~~e~l~~a~~~K~~Gn~~fk~~~~~~A~~~Y~~al~~l~~ 431 (492)
.|+..+..+. -..|.++--.|+|..|+..|+.++..++.
T Consensus 6 ~~~~~~i~e~----~k~ARe~Al~GnYdta~~yY~g~~~qI~k 44 (78)
T 2rpa_A 6 TMSLQMIVEN----VKLAREYALLGNYDSAMVYYQGVLDQMNK 44 (78)
T ss_dssp SSSSHHHHHH----HHHHHHHHHHTCCHHHHHHHHHHHHHHHH
T ss_pred HhhHHHHHHH----HHHHHHHHHhcChHHHHHHHHHHHHHHHH
Confidence 3455554333 34566666789999999999999987653
No 355
>1ya0_A SMG-7 transcript variant 2; alpha-helical repeat, tetratricopetide repeat (TPR), 14-3-3, signaling protein; 2.55A {Homo sapiens} SCOP: a.118.8.1
Probab=20.19 E-value=1.1e+02 Score=30.79 Aligned_cols=63 Identities=11% Similarity=-0.055 Sum_probs=47.2
Q ss_pred HhhhHHHHcccHHHHHHHHHHHHHHhcccCCCChHHHHHHHHHHHHhHhHHHHHHHHhcCHHHHHHHHHHHHhcCCCC
Q 011164 404 EQGNTLFKAGKYARASKRYEKAVKYIEYDTSFGDEEKKQAKALKVACNLNNAACKLKLKDYKQAEKLCTKVQQQKKFL 481 (492)
Q Consensus 404 ~~Gn~~fk~~~~~~A~~~Y~~al~~l~~~~~~~~~~~~~~~~~~~~l~~N~a~~~lk~~~~~~ai~~~~~al~~dp~n 481 (492)
-.|.-.--+..+..|...|.+|+..... .-..|+-+|..+.-.+++-+|+.+|.++|-.....
T Consensus 157 ~LGDL~RY~~~~~~A~~~Y~~A~~~~P~---------------~G~~~nqLavla~~~~~~l~a~y~y~rsl~~~~Pf 219 (497)
T 1ya0_A 157 HLGDIARYRNQTSQAESYYRHAAQLVPS---------------NGQPYNQLAILASSKGDHLTTIFYYCRSIAVKFPF 219 (497)
T ss_dssp HHHHHHHHTTCHHHHHHHHHHHHHHCTT---------------BSHHHHHHHHHHHHTTCHHHHHHHHHHHHSSSBCC
T ss_pred HcccHHHHHHHHHHHHHHHHHHHHhCCC---------------CCchHHHHHHHHhcccccHHHHHHHHHHHhcCCCC
Confidence 3444443345689999999999998543 35677888888888899999999999998765433
Done!