BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 011169
(492 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q8LFV3|CDF3_ARATH Cyclic dof factor 3 OS=Arabidopsis thaliana GN=CDF3 PE=1 SV=2
Length = 448
Score = 239 bits (610), Expect = 4e-62, Method: Compositional matrix adjust.
Identities = 188/509 (36%), Positives = 247/509 (48%), Gaps = 87/509 (17%)
Query: 6 MSAPIKDPAIKLFGAKIPVPDTRIPDVCKQITKEEAEDNHEYNSEEPDKSS------SLN 59
M +DPAIKLFG KIP P + + + +E +D + + P+K + + N
Sbjct: 1 MMMETRDPAIKLFGMKIPFPS--VFESAVTVEDDEEDDWSGGDDKSPEKVTPELSDKNNN 58
Query: 60 NVKEGARNFVQANGIQANAKTKADQSESNTDQE---------KAFKRPDKIIPCPRCNSM 110
N + + N + + T DQ ES+ E K K+P KI+PCPRC SM
Sbjct: 59 NCNDNSFNNSKPETLDKEEATSTDQIESSDTPEDNQQTTPDGKTLKKPTKILPCPRCKSM 118
Query: 111 DTKFCYFNNYNVNQPRHFCKNCQRYWTAGGTMRNVPVGAGRRKNKHFASQYRQILVSSDG 170
+TKFCY+NNYN+NQPRHFCK CQRYWTAGGTMRNVPVGAGRRKNK +S YR I + S+
Sbjct: 119 ETKFCYYNNYNINQPRHFCKACQRYWTAGGTMRNVPVGAGRRKNKSSSSHYRHITI-SEA 177
Query: 171 VPVTGLETPNSANQQLMLCGDSATTFRPSTGNGTVLKFGPETPLCESMENVLN-LRDQKR 229
+ L+ AN +++ G A + V+K + + N + L DQ+
Sbjct: 178 LEAARLDPGLQANTRVLSFGLEAQQQHVAAPMTPVMKLQEDQKVSNGARNRFHGLADQR- 236
Query: 230 SVEICTVTCVENKEEPSSSGSPVTASSIRGNELPESVMQKEQVMMTGSCNELNMQQSMH- 288
V VEN ++ SSGS VT S+ + + ES Q V+ N N + +
Sbjct: 237 -----LVARVENGDD-CSSGSSVTTSN--NHSVDESRAQSGSVVEAQMNNNNNNNMNGYA 288
Query: 289 CYPVSPWGVPWNPNNVASMEAAQNPSDRVCVPNGSNPGPVQWCPTTVLAVPGFCAPNIPL 348
C P PW WNP A P +P
Sbjct: 289 CIPGVPWPYTWNP---AMPPPGFYPPPGYPMP---------------------------- 317
Query: 349 QFVPASYWGMGVWAAGAGNIPLTGSNGCLSPSSSTSNNSCCSGNGSPTLGKHSRDP---- 404
F P YW IP+ + SP S CS SPTLGKH RD
Sbjct: 318 -FYP--YW----------TIPMLPPHQSSSPISQK-----CSNTNSPTLGKHPRDEGSSK 359
Query: 405 --NLTDEGQSEKCVLVPKTLRIDDPDEASRSPIWATLGFKPDQKDLKSGGAIFKDFETK- 461
N T+ Q CVLVPKTLRIDDP+EA++S IW TLG K ++ K+GG +FK F+ K
Sbjct: 360 KDNETERKQKAGCVLVPKTLRIDDPNEAAKSSIWTTLGIK-NEAMCKAGG-MFKGFDHKT 417
Query: 462 KGGKADVLDGAEILESNPAALSRSHTFQE 490
K D + + +L +NPAALSRSH F E
Sbjct: 418 KMYNNDKAENSPVLSANPAALSRSHNFHE 446
>sp|Q93ZL5|CDF2_ARATH Cyclic dof factor 2 OS=Arabidopsis thaliana GN=CDF2 PE=1 SV=2
Length = 457
Score = 223 bits (569), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 186/550 (33%), Positives = 238/550 (43%), Gaps = 160/550 (29%)
Query: 10 IKDPAIKLFGAKIPVPD--------------------TRIPDVC---------------- 33
+ DPAIKLFG IP+P+ R+ D C
Sbjct: 1 MADPAIKLFGKTIPLPELGVVDSSSSYTGFLTETQIPVRLSDSCTGDDDDEEMGDSGLGR 60
Query: 34 -------KQITKEEAEDNHEYNSE--EPDKSSSLNNVKEGARNFVQANGIQANAKTKADQ 84
+ E + E +SE E + N+V + AKT +
Sbjct: 61 EEGDDVGDGGGESETDKKEEKDSECQEESLRNESNDVTTTTSGITEKTETTKAAKTNEES 120
Query: 85 SESNTDQEKAFKRPDKIIPCPRCNSMDTKFCYFNNYNVNQPRHFCKNCQRYWTAGGTMRN 144
+ QE K+PDKI+PCPRCNSM+TKFCY+NNYNVNQPRHFCK CQRYWTAGGTMRN
Sbjct: 121 GGTACSQEGKLKKPDKILPCPRCNSMETKFCYYNNYNVNQPRHFCKKCQRYWTAGGTMRN 180
Query: 145 VPVGAGRRKNKHFASQY-RQILVSS----DGVPVTGLETPNSANQQLMLCGDSATTFRPS 199
VPVGAGRRKNK AS Y R + ++S V T L+ PN AN
Sbjct: 181 VPVGAGRRKNKSPASHYNRHVSITSAEAMQKVARTDLQHPNGAN---------------- 224
Query: 200 TGNGTVLKFGPETPLCESMENVLNLRDQKRSVEICTVTCVENKEEPSSSGSPVTASSIRG 259
+L FG ++ LCESM + LNL ++ + T T ++ E G +T +
Sbjct: 225 -----LLTFGSDSVLCESMASGLNLVEKSL---LKTQTVLQEPNE----GLKITVPLNQT 272
Query: 260 NELPESVMQKEQVMMTGSCNELNMQQSMHCYPVSP--WGVPWNPNNVASMEAAQNPSDRV 317
NE +V +V C+P P W WN
Sbjct: 273 NEEAGTVSPLPKV---------------PCFPGPPPTWPYAWN----------------- 300
Query: 318 CVPNGSNPGPVQWCPTTVLAVPGFCAPNIPLQFVPASYWGMGVWAAGAGNIPLTGSNGCL 377
V W T+L + P +YW + GA N T
Sbjct: 301 ---------GVSW---TILPF-----------YPPPAYWSCPGVSPGAWNS-FTWMPQPN 336
Query: 378 SPSSSTSNNSCCSGNGSPTLGKHSRDPNLTDEGQS--------------EKCVLVPKTLR 423
SPS S N SPTLGKHSRD N + G + E+C+ VPKTLR
Sbjct: 337 SPSGSNPN--------SPTLGKHSRDENAAEPGTAFDETESLGREKSKPERCLWVPKTLR 388
Query: 424 IDDPDEASRSPIWATLGFKPDQKDLKSGGAIFKDFETKKGGKADVLDGAE-ILESNPAAL 482
IDDP+EA++S IW TLG K D+ + + GA + K L G L++NPAAL
Sbjct: 389 IDDPEEAAKSSIWETLGIKKDE-NADTFGAFRSSTKEKSSLSEGRLPGRRPELQANPAAL 447
Query: 483 SRSHTFQEST 492
SRS F ES+
Sbjct: 448 SRSANFHESS 457
>sp|Q8W1E3|CDF1_ARATH Cyclic dof factor 1 OS=Arabidopsis thaliana GN=CDF1 PE=1 SV=2
Length = 298
Score = 151 bits (382), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 80/168 (47%), Positives = 95/168 (56%), Gaps = 44/168 (26%)
Query: 11 KDPAIKLFGAKIPVPDTRIPDVCKQITKEEAEDNHEYNSEEPDKSSSLNNVKEGARNFVQ 70
KDPAIKLFG KIP P ++ EE E N
Sbjct: 5 KDPAIKLFGMKIPFP------TVLEVADEEEEKNQN------------------------ 34
Query: 71 ANGIQANAKTKADQSESNTDQEKAFKRPDKIIPCPRCNSMDTKFCYFNNYNVNQPRHFCK 130
KT DQSE ++K K+P KI+PCPRCNSM+TKFCY+NNYNVNQPRHFCK
Sbjct: 35 --------KTLTDQSE----KDKTLKKPTKILPCPRCNSMETKFCYYNNYNVNQPRHFCK 82
Query: 131 NCQRYWTAGGTMRNVPVGAGRRKNKHFA--SQYRQILVSSDGVPVTGL 176
CQRYWT+GGTMR+VP+GAGRRKNK+ + S Y + +S PV
Sbjct: 83 ACQRYWTSGGTMRSVPIGAGRRKNKNNSPTSHYHHVTISETNGPVLSF 130
Score = 75.1 bits (183), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 47/98 (47%), Positives = 58/98 (59%), Gaps = 12/98 (12%)
Query: 397 LGKHSRDPNLT-DEGQSEKCVLVPKTLRIDDPDEASRSPIWATLGFKPDQKDLKSGGAIF 455
LGKHSRD + T + Q VLVPKTLRIDDP+EA++S IW TLG K + +F
Sbjct: 207 LGKHSRDEDETVKQKQRNGSVLVPKTLRIDDPNEAAKSSIWTTLGIKNE--------VMF 258
Query: 456 KDFETKKGGKADVLDGAE---ILESNPAALSRSHTFQE 490
F +KK K + E +L +NPAALSRS F E
Sbjct: 259 NGFGSKKEVKLSNKEETETSLVLCANPAALSRSINFHE 296
>sp|Q9LQX4|DOF13_ARATH Dof zinc finger protein DOF1.3 OS=Arabidopsis thaliana GN=DOF1.3
PE=2 SV=1
Length = 366
Score = 134 bits (336), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 71/147 (48%), Positives = 96/147 (65%), Gaps = 15/147 (10%)
Query: 55 SSSLNN-VKEGARNFVQANGIQANAKTKADQSESNTDQEKAFKRPDKIIPCPRCNSMDTK 113
SS+LNN KE + N ++ + T + E T+ K+PDKI+PCPRCNS DTK
Sbjct: 64 SSNLNNESKETSEN---SDDQHSEITTITSEEEKTTE----LKKPDKILPCPRCNSADTK 116
Query: 114 FCYFNNYNVNQPRHFCKNCQRYWTAGGTMRNVPVGAGRRKNKHFASQYRQILVSSDGVPV 173
FCY+NNYNVNQPRHFC+ CQRYWTAGG+MR VPVG+GRRKNK + S + + ++S+
Sbjct: 117 FCYYNNYNVNQPRHFCRKCQRYWTAGGSMRIVPVGSGRRKNKGWVSSDQYLHITSEDT-- 174
Query: 174 TGLETPNSANQQLML--CGDSATTFRP 198
+ NS++ +++ DS T RP
Sbjct: 175 ---DNYNSSSTKILSFESSDSLVTERP 198
Score = 34.7 bits (78), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 41/160 (25%), Positives = 65/160 (40%), Gaps = 34/160 (21%)
Query: 342 CAPNIPLQFVP-ASYWGMGVWAAGAGNIPLTGSNGCLSPSSSTSNNSCCSGNGSPTLGKH 400
+P P Q+ P S++ M V+ GC P ST + S C LGK
Sbjct: 230 VSPPWPYQYPPNPSFYHMPVYW------------GCAIPVWSTLDTSTC-------LGKR 270
Query: 401 SRDPNLTDEGQSEKCVLVPKTLRID------DPDEASRSPIWATLGF---KPDQKDLKSG 451
+RD + + K +L ++ + A+ + +W + K + S
Sbjct: 271 TRDETSHETVKESKNAFERTSLLLESQSIKNETSMATNNHVWYPVPMTREKTQEFSFFSN 330
Query: 452 GAIFKDFETKKGGKADVLDGAEILESNPAALSRSHTFQES 491
GA ETK V + L++NPAA++RS F+ES
Sbjct: 331 GA-----ETKSSNNRFVPETYLNLQANPAAMARSMNFRES 365
>sp|Q9SEZ3|CDF5_ARATH Cyclic dof factor 5 OS=Arabidopsis thaliana GN=CDF5 PE=2 SV=1
Length = 399
Score = 131 bits (330), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 54/80 (67%), Positives = 68/80 (85%)
Query: 90 DQEKAFKRPDKIIPCPRCNSMDTKFCYFNNYNVNQPRHFCKNCQRYWTAGGTMRNVPVGA 149
++ A K+PDK+IPCPRC S +TKFCY+NNYNVNQPR+FC+NCQRYWTAGG+MRNVPVG+
Sbjct: 120 EKSTALKKPDKLIPCPRCESANTKFCYYNNYNVNQPRYFCRNCQRYWTAGGSMRNVPVGS 179
Query: 150 GRRKNKHFASQYRQILVSSD 169
GRRKNK + S + V+S+
Sbjct: 180 GRRKNKGWPSSNHYLQVTSE 199
Score = 66.2 bits (160), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 60/187 (32%), Positives = 85/187 (45%), Gaps = 53/187 (28%)
Query: 316 RVCVPNGSNPGPVQWCPTTVLAVPGFCAPNIPLQFVPASYWGMGVWAAGAGNIPLTGSNG 375
+V +PN S+P P QW PT PN VP YW G
Sbjct: 252 QVMLPNNSSPWPYQWSPT---------GPNASFYPVPF-YW------------------G 283
Query: 376 CLSPSSSTSNNSCCSGNGSPTLGKHSRDPNLTDEGQ---------SEKCVLVPKTLRIDD 426
C P TS S C LGK SRD EG+ + + LV ++LR++
Sbjct: 284 CTVPIYPTSETSSC-------LGKRSRD---QTEGRINDTNTTITTTRARLVSESLRMN- 332
Query: 427 PDEASRSPIWATLGFKPDQKDLKSGGAIFKDFETKKGGKADVL--DGAEILESNPAALSR 484
EAS+S +W+ L KP++K G ++F F+TK L + + L++NPAA+SR
Sbjct: 333 -IEASKSAVWSKLPTKPEKKT--QGFSLFNGFDTKGNSNRSSLVSETSHSLQANPAAMSR 389
Query: 485 SHTFQES 491
+ F+ES
Sbjct: 390 AMNFRES 396
>sp|P68350|DOF15_ARATH Dof zinc finger protein DOF1.5 OS=Arabidopsis thaliana GN=DOF1.5
PE=1 SV=1
Length = 175
Score = 129 bits (325), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 55/62 (88%), Positives = 58/62 (93%)
Query: 94 AFKRPDKIIPCPRCNSMDTKFCYFNNYNVNQPRHFCKNCQRYWTAGGTMRNVPVGAGRRK 153
A KRPDKIIPCPRC SM+TKFCYFNNYNVNQPRHFCK CQRYWTAGG +RNVPVGAGRRK
Sbjct: 54 AEKRPDKIIPCPRCKSMETKFCYFNNYNVNQPRHFCKGCQRYWTAGGALRNVPVGAGRRK 113
Query: 154 NK 155
+K
Sbjct: 114 SK 115
>sp|O22967|CDF4_ARATH Cyclic dof factor 4 OS=Arabidopsis thaliana GN=CDF4 PE=2 SV=1
Length = 170
Score = 126 bits (317), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 58/76 (76%), Positives = 64/76 (84%), Gaps = 1/76 (1%)
Query: 80 TKADQSESNTDQEKAFKRPDKIIPCPRCNSMDTKFCYFNNYNVNQPRHFCKNCQRYWTAG 139
T A +S S++D A KRPDKII CPRC SM+TKFCYFNNYNVNQPRHFCK C RYWTAG
Sbjct: 37 TIAVRSSSSSDL-TAEKRPDKIIACPRCKSMETKFCYFNNYNVNQPRHFCKGCHRYWTAG 95
Query: 140 GTMRNVPVGAGRRKNK 155
G +RNVPVGAGRRK+K
Sbjct: 96 GALRNVPVGAGRRKSK 111
>sp|Q9M2U1|DOF36_ARATH Dof zinc finger protein DOF3.6 OS=Arabidopsis thaliana GN=DOF3.6
PE=1 SV=2
Length = 323
Score = 103 bits (257), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 41/69 (59%), Positives = 54/69 (78%)
Query: 98 PDKIIPCPRCNSMDTKFCYFNNYNVNQPRHFCKNCQRYWTAGGTMRNVPVGAGRRKNKHF 157
P+ + CPRC+S +TKFCYFNNY++ QPRHFCK C+RYWT GG++RNVPVG G R+NK
Sbjct: 72 PEAALNCPRCDSTNTKFCYFNNYSLTQPRHFCKTCRRYWTRGGSLRNVPVGGGFRRNKRS 131
Query: 158 ASQYRQILV 166
S+ + +V
Sbjct: 132 KSRSKSTVV 140
>sp|Q8LDR0|DOF54_ARATH Dof zinc finger protein DOF5.4 OS=Arabidopsis thaliana GN=DOF5.4
PE=2 SV=2
Length = 307
Score = 102 bits (255), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 44/67 (65%), Positives = 55/67 (82%), Gaps = 2/67 (2%)
Query: 102 IPCPRCNSMDTKFCYFNNYNVNQPRHFCKNCQRYWTAGGTMRNVPVGAGRRKNKHFASQY 161
+ CPRCNS++TKFCY+NNYN++QPRHFCKNC+RYWT GG +RNVPVG G RK K S+
Sbjct: 51 LKCPRCNSLNTKFCYYNNYNLSQPRHFCKNCRRYWTKGGVLRNVPVGGGCRKAKR--SKT 108
Query: 162 RQILVSS 168
+Q+ SS
Sbjct: 109 KQVPSSS 115
>sp|Q8LAP8|DOF46_ARATH Dof zinc finger protein DOF4.6 OS=Arabidopsis thaliana GN=DOF4.6
PE=2 SV=2
Length = 342
Score = 102 bits (253), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 40/65 (61%), Positives = 52/65 (80%)
Query: 91 QEKAFKRPDKIIPCPRCNSMDTKFCYFNNYNVNQPRHFCKNCQRYWTAGGTMRNVPVGAG 150
+ KA D+ + CPRCNS +TKFCY+NNY++ QPR+FCK C+RYWT GG++RN+PVG G
Sbjct: 42 ERKARPEKDQAVNCPRCNSTNTKFCYYNNYSLTQPRYFCKGCRRYWTEGGSLRNIPVGGG 101
Query: 151 RRKNK 155
RKNK
Sbjct: 102 SRKNK 106
>sp|P38564|MNB1A_MAIZE Dof zinc finger protein MNB1A OS=Zea mays GN=MNB1A PE=1 SV=2
Length = 238
Score = 101 bits (252), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 42/67 (62%), Positives = 50/67 (74%)
Query: 103 PCPRCNSMDTKFCYFNNYNVNQPRHFCKNCQRYWTAGGTMRNVPVGAGRRKNKHFASQYR 162
PCPRC S DTKFCY+NNYN +QPRHFCK C+RYWT GGT+RNVPVG G RK +S
Sbjct: 48 PCPRCASRDTKFCYYNNYNTSQPRHFCKGCRRYWTKGGTLRNVPVGGGTRKKPSSSSSSS 107
Query: 163 QILVSSD 169
+ ++D
Sbjct: 108 SYVAAAD 114
>sp|Q43385|DOF37_ARATH Dof zinc finger protein DOF3.7 OS=Arabidopsis thaliana GN=DOF3.7
PE=1 SV=2
Length = 296
Score = 100 bits (248), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 39/59 (66%), Positives = 49/59 (83%)
Query: 97 RPDKIIPCPRCNSMDTKFCYFNNYNVNQPRHFCKNCQRYWTAGGTMRNVPVGAGRRKNK 155
RP + + CPRCNS +TKFCY+NNY++ QPR+FCK C+RYWT GG++RNVPVG RKNK
Sbjct: 69 RPQEKVNCPRCNSTNTKFCYYNNYSLTQPRYFCKGCRRYWTEGGSLRNVPVGGSSRKNK 127
>sp|O24463|PBF_MAIZE Dof zinc finger protein PBF OS=Zea mays GN=PBF PE=1 SV=1
Length = 328
Score = 99.8 bits (247), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 43/83 (51%), Positives = 62/83 (74%), Gaps = 1/83 (1%)
Query: 79 KTKADQSESNTDQEKAFKRPDKIIPCPRCNSMDTKFCYFNNYNVNQPRHFCKNCQRYWTA 138
+T+A + + K + + + CPRC+S +TKFCY+NNY+++QPR+FCK C+RYWT
Sbjct: 37 QTRAMPQIGGSGERKPRPQLPEALKCPRCDSNNTKFCYYNNYSMSQPRYFCKACRRYWTH 96
Query: 139 GGTMRNVPVGAGRRKNKHFASQY 161
GGT+RNVP+G G RKNKH AS++
Sbjct: 97 GGTLRNVPIGGGCRKNKH-ASRF 118
>sp|O80928|DOF24_ARATH Dof zinc finger protein DOF2.4 OS=Arabidopsis thaliana GN=DOF2.4
PE=2 SV=1
Length = 330
Score = 99.8 bits (247), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 38/58 (65%), Positives = 47/58 (81%)
Query: 98 PDKIIPCPRCNSMDTKFCYFNNYNVNQPRHFCKNCQRYWTAGGTMRNVPVGAGRRKNK 155
P+ + CPRC S +TKFCYFNNY++ QPRHFCK C+RYWT GG +RNVPVG G R+N+
Sbjct: 85 PEAALKCPRCESTNTKFCYFNNYSLTQPRHFCKTCRRYWTRGGALRNVPVGGGCRRNR 142
>sp|Q39088|DOF34_ARATH Dof zinc finger protein DOF3.4 OS=Arabidopsis thaliana GN=DOF3.4
PE=1 SV=2
Length = 253
Score = 99.4 bits (246), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 38/53 (71%), Positives = 47/53 (88%)
Query: 102 IPCPRCNSMDTKFCYFNNYNVNQPRHFCKNCQRYWTAGGTMRNVPVGAGRRKN 154
+PCPRC+S +TKFCY+NNYN +QPRHFCK C+RYWT GGT+R+VPVG G RK+
Sbjct: 30 LPCPRCDSSNTKFCYYNNYNFSQPRHFCKACRRYWTHGGTLRDVPVGGGTRKS 82
>sp|Q84TE9|DOF53_ARATH Dof zinc finger protein DOF5.3 OS=Arabidopsis thaliana GN=DOF5.3
PE=2 SV=1
Length = 257
Score = 99.0 bits (245), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 38/58 (65%), Positives = 50/58 (86%)
Query: 98 PDKIIPCPRCNSMDTKFCYFNNYNVNQPRHFCKNCQRYWTAGGTMRNVPVGAGRRKNK 155
P+ + CPRC+S +TKFCY+NNY++ QPR+FCK+C+RYWT GGT+RN+PVG G RKNK
Sbjct: 51 PELALRCPRCDSTNTKFCYYNNYSLTQPRYFCKSCRRYWTKGGTLRNIPVGGGCRKNK 108
>sp|Q9ZV33|DOF22_ARATH Dof zinc finger protein DOF2.2 OS=Arabidopsis thaliana GN=DOF2.2
PE=2 SV=2
Length = 340
Score = 98.6 bits (244), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 38/56 (67%), Positives = 46/56 (82%)
Query: 98 PDKIIPCPRCNSMDTKFCYFNNYNVNQPRHFCKNCQRYWTAGGTMRNVPVGAGRRK 153
P+ + CPRC+S +TKFCYFNNYN+ QPRHFCK C+RYWT GG +RNVPVG G R+
Sbjct: 90 PEGALKCPRCDSANTKFCYFNNYNLTQPRHFCKACRRYWTRGGALRNVPVGGGCRR 145
>sp|O82155|DOF17_ARATH Dof zinc finger protein DOF1.7 OS=Arabidopsis thaliana GN=DOF1.7
PE=2 SV=1
Length = 194
Score = 98.6 bits (244), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 37/52 (71%), Positives = 46/52 (88%)
Query: 102 IPCPRCNSMDTKFCYFNNYNVNQPRHFCKNCQRYWTAGGTMRNVPVGAGRRK 153
+ CPRC+S +TKFCY+NNYN++QPRHFCKNC+RYWT GG +RN+PVG G RK
Sbjct: 33 LKCPRCDSPNTKFCYYNNYNLSQPRHFCKNCRRYWTKGGALRNIPVGGGTRK 84
>sp|Q84JQ8|DOF18_ARATH Dof zinc finger protein DOF1.8 OS=Arabidopsis thaliana GN=DOF1.8
PE=2 SV=1
Length = 352
Score = 98.6 bits (244), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 37/60 (61%), Positives = 51/60 (85%)
Query: 91 QEKAFKRPDKIIPCPRCNSMDTKFCYFNNYNVNQPRHFCKNCQRYWTAGGTMRNVPVGAG 150
+ KA D+ + CPRCNS++TKFCY+NNY++ QPR+FCK+C+RYWTAGG++RN+PVG G
Sbjct: 38 ERKARPEKDQALNCPRCNSLNTKFCYYNNYSLTQPRYFCKDCRRYWTAGGSLRNIPVGGG 97
>sp|Q9M1E6|DOF32_ARATH Dof zinc finger protein DOF3.2 OS=Arabidopsis thaliana GN=DOF3.2
PE=2 SV=1
Length = 245
Score = 97.4 bits (241), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 47/122 (38%), Positives = 73/122 (59%), Gaps = 10/122 (8%)
Query: 98 PDKIIPCPRCNSMDTKFCYFNNYNVNQPRHFCKNCQRYWTAGGTMRNVPVGAGRRKNKHF 157
P++ + CPRC+S +TKFCY+NNY+++QPR+FCK+C+RYWT GG +RN+P+G RK+K
Sbjct: 36 PEQSLRCPRCDSTNTKFCYYNNYSLSQPRYFCKSCRRYWTKGGILRNIPIGGAYRKHKRS 95
Query: 158 ASQYRQI------LVSSDG----VPVTGLETPNSANQQLMLCGDSATTFRPSTGNGTVLK 207
+S + + ++ DG G N +N+Q+ L A + G + L
Sbjct: 96 SSATKSLRTTPEPTMTHDGKSFPTASFGYNNNNISNEQMELGLAYALLNKQPLGVSSHLG 155
Query: 208 FG 209
FG
Sbjct: 156 FG 157
>sp|Q9FZA4|DOF14_ARATH Dof zinc finger protein DOF1.4 OS=Arabidopsis thaliana GN=DOF1.4
PE=2 SV=1
Length = 311
Score = 97.1 bits (240), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 38/54 (70%), Positives = 47/54 (87%)
Query: 102 IPCPRCNSMDTKFCYFNNYNVNQPRHFCKNCQRYWTAGGTMRNVPVGAGRRKNK 155
+ CPRC+S +TKFCY+NNY+++QPRHFCK C+RYWT GGT+RNVPVG RKNK
Sbjct: 27 LKCPRCDSSNTKFCYYNNYSLSQPRHFCKACKRYWTRGGTLRNVPVGGSYRKNK 80
>sp|Q8L9V6|DOF11_ARATH Dof zinc finger protein DOF1.1 OS=Arabidopsis thaliana GN=DOF1.1
PE=1 SV=2
Length = 331
Score = 97.1 bits (240), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 39/55 (70%), Positives = 46/55 (83%), Gaps = 1/55 (1%)
Query: 102 IPCPRCNSMDTKFCYFNNYNVNQPRHFCKNCQRYWTAGGTMRNVPVGAG-RRKNK 155
+ CPRC+S +TKFCY+NNYN+ QPRHFCK C+RYWT GG +RNVPVG G RR NK
Sbjct: 77 LKCPRCDSSNTKFCYYNNYNLTQPRHFCKGCRRYWTQGGALRNVPVGGGCRRNNK 131
>sp|Q9LZ56|DOF51_ARATH Dof zinc finger protein DOF5.1 OS=Arabidopsis thaliana GN=DOF5.1
PE=2 SV=1
Length = 399
Score = 96.7 bits (239), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 38/58 (65%), Positives = 48/58 (82%)
Query: 98 PDKIIPCPRCNSMDTKFCYFNNYNVNQPRHFCKNCQRYWTAGGTMRNVPVGAGRRKNK 155
P+ + CPRC+S +TKFCYFNNY++ QPRHFCK C+RYWT GG +R+VPVG G R+NK
Sbjct: 91 PETALKCPRCDSTNTKFCYFNNYSLTQPRHFCKACRRYWTRGGALRSVPVGGGCRRNK 148
>sp|Q9LSL6|DOF57_ARATH Dof zinc finger protein DOF5.7 OS=Arabidopsis thaliana GN=DOF5.7
PE=2 SV=1
Length = 316
Score = 96.7 bits (239), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 43/80 (53%), Positives = 56/80 (70%), Gaps = 5/80 (6%)
Query: 81 KADQSESNTDQEK-----AFKRPDKIIPCPRCNSMDTKFCYFNNYNVNQPRHFCKNCQRY 135
K D S T Q K + + + + CPRCNS +TKFCY+NNY+++QPRHFCK+C+RY
Sbjct: 15 KPDHRISGTSQTKKPPSSSVAQDQQNLKCPRCNSPNTKFCYYNNYSLSQPRHFCKSCRRY 74
Query: 136 WTAGGTMRNVPVGAGRRKNK 155
WT GG +RNVP+G G RK K
Sbjct: 75 WTRGGALRNVPIGGGCRKTK 94
>sp|Q94AR6|DOF31_ARATH Dof zinc finger protein DOF3.1 OS=Arabidopsis thaliana GN=DOF3.1
PE=2 SV=2
Length = 204
Score = 96.3 bits (238), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 38/53 (71%), Positives = 47/53 (88%)
Query: 102 IPCPRCNSMDTKFCYFNNYNVNQPRHFCKNCQRYWTAGGTMRNVPVGAGRRKN 154
+ CPRC+S +TKFCY+NNYN++QPRHFCK+C+RYWT GG +RNVPVG G RKN
Sbjct: 29 LKCPRCDSPNTKFCYYNNYNLSQPRHFCKSCRRYWTKGGALRNVPVGGGSRKN 81
>sp|Q9M161|DOF41_ARATH Dof zinc finger protein DOF4.1 OS=Arabidopsis thaliana GN=DOF4.1
PE=2 SV=2
Length = 294
Score = 95.5 bits (236), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 39/59 (66%), Positives = 49/59 (83%)
Query: 97 RPDKIIPCPRCNSMDTKFCYFNNYNVNQPRHFCKNCQRYWTAGGTMRNVPVGAGRRKNK 155
RP + CPRCNS +TKFCY+NNY++ QPR+ CK+C+RYWT GG++RNVPVG G RKNK
Sbjct: 63 RPQEPRNCPRCNSSNTKFCYYNNYSLAQPRYLCKSCRRYWTEGGSLRNVPVGGGSRKNK 121
>sp|Q9FGD6|DOF58_ARATH Dof zinc finger protein DOF5.8 OS=Arabidopsis thaliana GN=DOF5.8
PE=2 SV=1
Length = 225
Score = 95.1 bits (235), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 45/102 (44%), Positives = 65/102 (63%), Gaps = 7/102 (6%)
Query: 102 IPCPRCNSMDTKFCYFNNYNVNQPRHFCKNCQRYWTAGGTMRNVPVGAGRRK----NKHF 157
+ CPRC S +TKFCY+NNYN +QPRHFCK+C+RYWT GGT+R++PVG RK ++ +
Sbjct: 32 LSCPRCESTNTKFCYYNNYNFSQPRHFCKSCRRYWTHGGTLRDIPVGGVSRKSSKRSRTY 91
Query: 158 ASQYRQILVSSDGVPVTG---LETPNSANQQLMLCGDSATTF 196
+S +V S P+ L +S+N + SA++F
Sbjct: 92 SSAATTSVVGSRNFPLQATPVLFPQSSSNGGITTAKGSASSF 133
>sp|Q8LE43|DOF21_ARATH Dof zinc finger protein DOF2.1 OS=Arabidopsis thaliana GN=DOF2.1
PE=2 SV=2
Length = 288
Score = 94.7 bits (234), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 38/56 (67%), Positives = 49/56 (87%)
Query: 104 CPRCNSMDTKFCYFNNYNVNQPRHFCKNCQRYWTAGGTMRNVPVGAGRRKNKHFAS 159
CPRC S +TKFCY+NNY+++QPR+FCK+C+RYWT GGT+RNVPVG G R+NK +S
Sbjct: 50 CPRCESPNTKFCYYNNYSLSQPRYFCKSCRRYWTKGGTLRNVPVGGGCRRNKRSSS 105
>sp|Q9ZPY0|DOF25_ARATH Dof zinc finger protein DOF2.5 OS=Arabidopsis thaliana GN=DOF2.5
PE=2 SV=3
Length = 369
Score = 94.0 bits (232), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 35/53 (66%), Positives = 45/53 (84%)
Query: 97 RPDKIIPCPRCNSMDTKFCYFNNYNVNQPRHFCKNCQRYWTAGGTMRNVPVGA 149
RP + + CPRCNS +TKFCY+NNY++ QPR+FCK C+RYWT GG++RNVPVG
Sbjct: 75 RPQEKLNCPRCNSTNTKFCYYNNYSLTQPRYFCKGCRRYWTEGGSLRNVPVGG 127
>sp|Q84K52|DOF47_ARATH Dof zinc finger protein DOF4.7 OS=Arabidopsis thaliana GN=DOF4.7
PE=2 SV=1
Length = 246
Score = 94.0 bits (232), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 36/56 (64%), Positives = 49/56 (87%), Gaps = 1/56 (1%)
Query: 101 IIPCPRCNSMDTKFCYFNNYNVNQPRHFCKNCQRYWTAGGTMRNVPVGAG-RRKNK 155
++ CPRC+S++TKFCY+NNY+++QPRH+CKNC+RYWT GG +RNVP+G R KNK
Sbjct: 40 VLKCPRCDSVNTKFCYYNNYSLSQPRHYCKNCRRYWTRGGALRNVPIGGSTRNKNK 95
>sp|Q9SX97|DOF16_ARATH Dof zinc finger protein DOF1.6 OS=Arabidopsis thaliana GN=DOF1.6
PE=2 SV=1
Length = 209
Score = 93.2 bits (230), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 35/49 (71%), Positives = 44/49 (89%)
Query: 102 IPCPRCNSMDTKFCYFNNYNVNQPRHFCKNCQRYWTAGGTMRNVPVGAG 150
+PCPRCNS TKFCY+NNYN+ QPR++CK+C+RYWT GGT+R+VPVG G
Sbjct: 29 LPCPRCNSTTTKFCYYNNYNLAQPRYYCKSCRRYWTQGGTLRDVPVGGG 77
>sp|Q9SVC5|DOF35_ARATH Dof zinc finger protein DOF3.5 OS=Arabidopsis thaliana GN=DOF3.5
PE=3 SV=1
Length = 247
Score = 91.3 bits (225), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 37/57 (64%), Positives = 48/57 (84%), Gaps = 1/57 (1%)
Query: 100 KIIP-CPRCNSMDTKFCYFNNYNVNQPRHFCKNCQRYWTAGGTMRNVPVGAGRRKNK 155
+I P CPRC S +TKFCY+NNY++ QPR+FCK C+RYWT GG++RNVPVG G RK++
Sbjct: 22 EITPSCPRCGSSNTKFCYYNNYSLTQPRYFCKGCRRYWTKGGSLRNVPVGGGCRKSR 78
>sp|Q9SUA9|DOF44_ARATH Dof zinc finger protein DOF4.4 OS=Arabidopsis thaliana GN=DOF4.4
PE=3 SV=1
Length = 210
Score = 90.5 bits (223), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 42/86 (48%), Positives = 56/86 (65%), Gaps = 2/86 (2%)
Query: 90 DQEKAFKRPDKIIPCPRCNSMDTKFCYFNNYNVNQPRHFCKNCQRYWTAGGTMRNVPVGA 149
+Q KRP CPRC+S +TKFC++NNY+ +QPR+FCKNC+RYWT GG +RN+PVG
Sbjct: 12 NQVNGLKRPPPSRVCPRCDSDNTKFCFYNNYSESQPRYFCKNCRRYWTHGGALRNIPVGG 71
Query: 150 GRRKNKHFASQYRQI--LVSSDGVPV 173
RK K I +VS + P+
Sbjct: 72 SCRKPKRLKVDQSSISEMVSVENQPI 97
>sp|P68349|DOF12_ARATH Dof zinc finger protein DOF1.2 OS=Arabidopsis thaliana GN=DOF1.2
PE=2 SV=1
Length = 260
Score = 90.5 bits (223), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 40/82 (48%), Positives = 53/82 (64%), Gaps = 16/82 (19%)
Query: 88 NTDQEKAFKRPDKIIP----------------CPRCNSMDTKFCYFNNYNVNQPRHFCKN 131
N+ Q+ F P+ IP CPRC S +TKFCY+NNY+++QPR+FCK
Sbjct: 8 NSYQQHQFPLPEMEIPEKWKLSYEQEAITAPACPRCASSNTKFCYYNNYSLSQPRYFCKG 67
Query: 132 CQRYWTAGGTMRNVPVGAGRRK 153
C+RYWT GG++RN+PVG G RK
Sbjct: 68 CRRYWTKGGSLRNIPVGGGCRK 89
>sp|Q9FM03|DOF56_ARATH Dof zinc finger protein DOF5.6 OS=Arabidopsis thaliana GN=DOF5.6
PE=2 SV=2
Length = 372
Score = 90.1 bits (222), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 34/49 (69%), Positives = 42/49 (85%)
Query: 104 CPRCNSMDTKFCYFNNYNVNQPRHFCKNCQRYWTAGGTMRNVPVGAGRR 152
CPRC S TKFCY+NNY+++QPR+FCK C+RYWT GGT+RN+PVG G R
Sbjct: 75 CPRCESTHTKFCYYNNYSLSQPRYFCKTCRRYWTKGGTLRNIPVGGGCR 123
>sp|Q9SUB0|DOF43_ARATH Dof zinc finger protein DOF4.3 OS=Arabidopsis thaliana GN=DOF4.3
PE=3 SV=1
Length = 232
Score = 82.0 bits (201), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 32/52 (61%), Positives = 41/52 (78%)
Query: 104 CPRCNSMDTKFCYFNNYNVNQPRHFCKNCQRYWTAGGTMRNVPVGAGRRKNK 155
C RC+S +TKFCY+NNY+ QPR+FCKNC+RYWT GG +RNVP+G R +
Sbjct: 27 CARCDSDNTKFCYYNNYSEFQPRYFCKNCRRYWTHGGALRNVPIGGSSRAKR 78
>sp|O49550|DOF45_ARATH Dof zinc finger protein DOF4.5 OS=Arabidopsis thaliana GN=DOF4.5
PE=3 SV=1
Length = 249
Score = 80.1 bits (196), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 31/52 (59%), Positives = 40/52 (76%)
Query: 104 CPRCNSMDTKFCYFNNYNVNQPRHFCKNCQRYWTAGGTMRNVPVGAGRRKNK 155
C RC+S +TKFCY+NNY QPR+FCKNC+RYWT GG +RN+P+G R +
Sbjct: 27 CARCDSDNTKFCYYNNYCEFQPRYFCKNCRRYWTHGGALRNIPIGGSSRAKR 78
>sp|Q9SUB1|DOF42_ARATH Dof zinc finger protein DOF4.2 OS=Arabidopsis thaliana GN=DOF4.2
PE=3 SV=1
Length = 194
Score = 64.3 bits (155), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 31/61 (50%), Positives = 39/61 (63%), Gaps = 2/61 (3%)
Query: 87 SNTDQEKAFKRPDKIIPCPRCNSMDTKFCYFNNYNVNQPRHFCKNCQRYWTAGGTMRNVP 146
+N D E P ++ CPRC S T+F YFNN +QPR+ CKNC R WT GG +RN+P
Sbjct: 8 TNEDNEMNVMPPPRV--CPRCYSDQTRFSYFNNNKKSQPRYKCKNCCRCWTHGGVLRNIP 65
Query: 147 V 147
V
Sbjct: 66 V 66
>sp|Q12WF0|GGR2_METBU Digeranylgeranylglycerophospholipid reductase 2 OS=Methanococcoides
burtonii (strain DSM 6242) GN=Mbur_1308 PE=3 SV=1
Length = 406
Score = 36.2 bits (82), Expect = 0.56, Method: Compositional matrix adjust.
Identities = 34/111 (30%), Positives = 45/111 (40%), Gaps = 22/111 (19%)
Query: 110 MDTKFCYFNNYNVNQPRHFCKNCQRYWT--AGGTMRNVPVG-----AGRRKNKHFASQY- 161
+D +FCYF N P + W GG NV +G AG+ K + +
Sbjct: 190 IDQEFCYFYLGNEIAPAGYV------WMFPKGGNKANVGIGILGSRAGKDKPIELLNDFI 243
Query: 162 -------RQILVSSDGVPVTGLETPNSANQQLMLCGDSATTFRPSTGNGTV 205
+ I + GVPV G AN LML GD+A P TG G +
Sbjct: 244 EKNMPDAKIIEMVIGGVPVCGTIERTIANG-LMLVGDAARQSDPITGGGII 293
>sp|Q54VE8|RSAD1_DICDI Radical S-adenosyl methionine domain-containing protein 1,
mitochondrial OS=Dictyostelium discoideum GN=rsad1 PE=3
SV=1
Length = 446
Score = 35.4 bits (80), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 30/100 (30%), Positives = 44/100 (44%), Gaps = 15/100 (15%)
Query: 387 SCCSGNGSPTLGKHSRDPNLTDEGQSEKCVLVPKTLRIDDPDEASRSPIWATLGFKPDQK 446
S G G+P+L K S + + L P +L I+D I TL PDQK
Sbjct: 89 SIYFGGGTPSLAKISTFVETIETMKK----LFPSSLSIED--------IEITLEVNPDQK 136
Query: 447 DLKSGGAIFKDFETKKGGKADVLDGAEILESNPAALSRSH 486
DLK+ + KDF+ G L +++ + L R+H
Sbjct: 137 DLKN---LLKDFKKYVGVNRVSLGVQSLVDKDLHFLGRTH 173
>sp|Q7SD11|MSH3_NEUCR DNA mismatch repair protein msh-3 OS=Neurospora crassa (strain ATCC
24698 / 74-OR23-1A / CBS 708.71 / DSM 1257 / FGSC 987)
GN=msh-3 PE=3 SV=1
Length = 1145
Score = 34.3 bits (77), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 26/84 (30%), Positives = 39/84 (46%), Gaps = 14/84 (16%)
Query: 333 TTVLAVPGFCAPNIPLQFVPASYWGMGVWAAGA----------GNIPLTGSNGCLSPSSS 382
+TV A+PG+ P F+P+S+ G G IP T S G LS S+S
Sbjct: 806 STVAALPGYTKPT----FLPSSHPSFLSITEGRHPIAEHLLPNGYIPFTMSLGTLSSSAS 861
Query: 383 TSNNSCCSGNGSPTLGKHSRDPNL 406
+ + + S +G P L + PN+
Sbjct: 862 SPDPNPTSPSGKPALAQLITGPNM 885
>sp|Q8VCM3|ZFY21_MOUSE Zinc finger FYVE domain-containing protein 21 OS=Mus musculus
GN=Zfyve21 PE=2 SV=2
Length = 234
Score = 32.7 bits (73), Expect = 7.3, Method: Compositional matrix adjust.
Identities = 42/162 (25%), Positives = 62/162 (38%), Gaps = 25/162 (15%)
Query: 98 PDKIIPCPRCNSMDTKFCYFNNYNVNQPRHFCKNCQRYWTAGGTMRNVPVGAGRRKNKHF 157
PDK CPRC D KF + +H C+ C + + + VP+ + F
Sbjct: 43 PDK--ECPRCMQCDAKFDFITR------KHHCRRCGKCFCDRCCSQKVPL-----RRMCF 89
Query: 158 ASQYRQILVSSDGVPVTGLETPNSANQQLMLCGDSATTFRPSTGNGTVLKFGPETPLCES 217
RQ +D V+ E Q +L S TF + G+ PET +C
Sbjct: 90 VDPVRQ---CADCALVSHREAEFYDKQLKVLL--SGATFLVTFGDSE----KPETMVCRL 140
Query: 218 MENVLNLR---DQKRSVEICTVTCVENKEEPSSSGSPVTASS 256
N L D R +EI V V+ E + G+ T ++
Sbjct: 141 SNNQRCLVLDGDSHREIEIAHVCTVQILTEGFTPGAGSTRAT 182
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.312 0.129 0.397
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 200,143,137
Number of Sequences: 539616
Number of extensions: 9122580
Number of successful extensions: 17448
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 40
Number of HSP's successfully gapped in prelim test: 25
Number of HSP's that attempted gapping in prelim test: 17356
Number of HSP's gapped (non-prelim): 106
length of query: 492
length of database: 191,569,459
effective HSP length: 122
effective length of query: 370
effective length of database: 125,736,307
effective search space: 46522433590
effective search space used: 46522433590
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.9 bits)
S2: 63 (28.9 bits)