BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 011170
(492 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q8GW72|FUCO1_ARATH Alpha-L-fucosidase 1 OS=Arabidopsis thaliana GN=FUC1 PE=1 SV=2
Length = 506
Score = 503 bits (1295), Expect = e-141, Method: Compositional matrix adjust.
Identities = 242/465 (52%), Positives = 323/465 (69%), Gaps = 13/465 (2%)
Query: 32 PLPLSPLPSFSQLKWQQRELIMFLHFGVNTFTDSEWGTGNENPEIFNPLGLDANQWVNTA 91
P P+ PLPS QL+WQ + MFLHFG NTFTDSEWGTG NP IFNP L+A+QWV A
Sbjct: 31 PCPILPLPSSQQLQWQLGSMAMFLHFGPNTFTDSEWGTGKANPSIFNPTHLNASQWVQIA 90
Query: 92 AEAGVSLMILTAKHHDGFCLWPSKFTEHSVAHSPWKHGRGDVVQELVNAAKARGVDVGLY 151
++G S +ILTAKHHDGFCLWPS++T++SV S W++G GDVV EL +AAK G+ +GLY
Sbjct: 91 KDSGFSRVILTAKHHDGFCLWPSEYTDYSVKSSQWRNGAGDVVAELASAAKEAGIGLGLY 150
Query: 152 LSPWDRHDPRYGHDLQYNEYYLAQLQELLTRYGDVREIWFDGAKGSNAPNMSYYFTDWFA 211
LSPWDRH+ YG L+YNE+YL+Q+ ELLT+YG+++E+W DGAKG +M Y+F WF+
Sbjct: 151 LSPWDRHEQCYGKTLEYNEFYLSQMTELLTKYGEIKEVWLDGAKGDGEKDMEYFFDTWFS 210
Query: 212 MVKELQSSINIFSDAGPDVRWVGNEKGFAGSTCWSTINRTSLSIGNGSIVDYLSTGDAKG 271
++ +LQ IFSDAGPDVRW+G+E G AGSTCWS NRT+ IG+ + Y GD G
Sbjct: 211 LIHQLQPKAVIFSDAGPDVRWIGDEAGLAGSTCWSLFNRTNAKIGD-TEPSYSQEGDGYG 269
Query: 272 TDWLPAECDVSIRKGWFWHKSETPKKLSELLEIYYNSVGRNCVMLLNVPPNTTGLISETD 331
DW+PAECDVSIR GWFWH SE+PK +LL+IYYNSVGRNC+ LLNVPPN++GLISE D
Sbjct: 270 QDWVPAECDVSIRPGWFWHASESPKPAVQLLDIYYNSVGRNCLFLLNVPPNSSGLISEQD 329
Query: 332 VQRLREFGTAIDTIFSKNLAENCFVKASSQRAGKGGGFGPENVLDDDHLRTYWAPRDGDG 391
++ L EF ++IFS NLA FV +SS R + FGP+NVL++ L YWAP +
Sbjct: 330 IKVLEEFSEMKNSIFSNNLARKAFVNSSSIRGDQSSQFGPKNVLEEG-LDKYWAPEE--- 385
Query: 392 ISDDHWIEIRAADEGLRFNVIRIQEAIGLGQRIKRHEIFV------DGKLVAEGTTVGHK 445
+ + W+ + + FNV+ I+E I +GQRI + + + V GTTVG+K
Sbjct: 386 -NQNEWVLYLEFKDLVSFNVLEIREPIHMGQRIASFHLETRKTGSGEWERVVSGTTVGNK 444
Query: 446 KLHRLENGVIDGHVVRIKIKESRAVPLISSIGLHFDPYWHPNRQS 490
+L R N V++ +++ + ++R PLIS +GL+ D + +R +
Sbjct: 445 RLLRFLN-VVESRSLKLVVDKARTDPLISYLGLYMDKFSGSSRNT 488
>sp|Q7XUR3|FUCO1_ORYSJ Putative alpha-L-fucosidase 1 OS=Oryza sativa subsp. japonica
GN=Os04g0560400 PE=3 SV=2
Length = 517
Score = 466 bits (1199), Expect = e-130, Method: Compositional matrix adjust.
Identities = 238/449 (53%), Positives = 306/449 (68%), Gaps = 14/449 (3%)
Query: 40 SFSQLKWQQRELIMFLHFGVNTFTDSEWGTGNENPEIFNPLGLDANQWVNTAAEAGVSLM 99
S++QL+WQ E+ +FLHFG NTFTDSEWG+ +P +F P LDA QW AA G +
Sbjct: 41 SYAQLQWQLSEMALFLHFGPNTFTDSEWGSVRADPAVFAPSALDAGQWARAAAAGGFGRV 100
Query: 100 ILTAKHHDGFCLWPSKFTEHSVAHSPWKHGRGDVVQELVNAAKARGVDVGLYLSPWDRHD 159
+LTAKHHDGFCLWPS T +SVA SPWK G GDVV EL AA+A G+ +GLYLSPWDRH+
Sbjct: 101 VLTAKHHDGFCLWPSALTNYSVAASPWKGGAGDVVGELAAAARAEGIGLGLYLSPWDRHE 160
Query: 160 PRYGHDLQYNEYYLAQLQELLTRYGDVREIWFDGAKGSNAPNMSYYFTDWFAMVKELQSS 219
P YG + YNE+YL Q+ ELLTRYGDV E+W DGAKG +M Y F WFA++ +LQ
Sbjct: 161 PVYGDTVAYNEHYLGQMTELLTRYGDVEEVWLDGAKG-EGKDMDYMFDAWFALIHQLQQR 219
Query: 220 INIFSDAGPDVRWVGNEKGFAGSTCWSTINRTSLSIGNGSIVDYLSTGDAKGTDWLPAEC 279
+ IFSDAGPD RWVG+E G AG TCWS N+++++IG+ I +Y GD G DW+PAEC
Sbjct: 220 VVIFSDAGPDTRWVGDEAGVAGYTCWSPFNKSTVTIGH-IIPEYSRCGDPFGQDWVPAEC 278
Query: 280 DVSIRKGWFWHKSETPKKLSELLEIYYNSVGRNCVMLLNVPPNTTGLISETDVQRLREFG 339
DVSIR GWFWH SE PK + LL+IYY SVGRNC+++LNVPPN++GLIS D+Q L+EF
Sbjct: 279 DVSIRPGWFWHASEKPKNATTLLDIYYKSVGRNCLLILNVPPNSSGLISTEDMQVLQEFT 338
Query: 340 TAIDTIFSKNLAENCFVKASSQRAGKGG-GFGPENVLDDDHLRTYWAPRDGDGISDDHWI 398
TIFS+N A N V AS+ R G G F P NVL + + +YWAP +G W
Sbjct: 339 EIRQTIFSQNFAANATVTASTVRGGLGNQQFAPSNVLQES-IYSYWAPEEG----QSSWE 393
Query: 399 EIRAADEGLRFNVIRIQEAIGLGQRIK--RHEIFVDG--KLVAEGTTVGHKKLHRLENGV 454
+ + FNVI++QE I +GQR+ R EI VD + + EGTT+G+K+L + V
Sbjct: 394 MLFDLGQSASFNVIQLQEPIQMGQRVIKFRVEILVDELWQTIVEGTTIGYKRLFQFP--V 451
Query: 455 IDGHVVRIKIKESRAVPLISSIGLHFDPY 483
++G +++ I +RA PLIS G+ D +
Sbjct: 452 VEGQFLKLSIDGARADPLISFFGVFTDSF 480
>sp|Q6AYS4|FUCO2_RAT Plasma alpha-L-fucosidase OS=Rattus norvegicus GN=Fuca2 PE=2 SV=1
Length = 459
Score = 62.8 bits (151), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 73/281 (25%), Positives = 125/281 (44%), Gaps = 40/281 (14%)
Query: 76 IFNPLGLDANQWVNTAAEAGVSLMILTAKHHDGFCLWPS--KFTEHSVAHSPWKHGRGDV 133
+F +ANQW + +G ++LT+KHH+GF LW S + ++V P + D+
Sbjct: 98 LFTAKYFNANQWADLLQASGAKYVVLTSKHHEGFTLWGSAHSWNWNAVDEGP----KRDI 153
Query: 134 VQELVNAAKAR-GVDVGLYLSPWDRHDPRYGHD----LQYNEYYLA----QLQELLTRYG 184
V+EL A + R + GLY S ++ P + D Q + +A +L EL+T+Y
Sbjct: 154 VKELEVAVRNRTDLHFGLYYSLFEWFHPLFLEDQSSAFQKQRFPVAKTLPELYELVTKY- 212
Query: 185 DVREIWFDGAKGSNAPNMSYYFTDWFAMVKELQSSINIFSDAGPDVRWVGNEKGFAGSTC 244
+W DG G AP+ + TD+ A +++++ V N++ AGS C
Sbjct: 213 QPEVLWSDGDGG--APDHYWNSTDFLAW---------LYNESPVRDTVVTNDRWGAGSIC 261
Query: 245 WSTINRTSLSIGNGSIVDYLSTGDAKGTDWLPAECDVSIRKGW-FWHKSETPKKLS--EL 301
G + D + G W C + W + ++E L+ EL
Sbjct: 262 --------KHGGYYTCSDRYNPGHLLPHKW--ENCMTIDKFSWGYRREAEIGDYLTIEEL 311
Query: 302 LEIYYNSVGRNCVMLLNVPPNTTGLISETDVQRLREFGTAI 342
++ +V +L+N+ P G+I +RLR+ GT +
Sbjct: 312 VKQLVETVSCGGNLLMNIGPTLDGIIPVIFEERLRQMGTWL 352
>sp|P10901|FUCO_DICDI Alpha-L-fucosidase OS=Dictyostelium discoideum GN=alfA PE=3 SV=1
Length = 461
Score = 61.2 bits (147), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 69/271 (25%), Positives = 115/271 (42%), Gaps = 38/271 (14%)
Query: 82 LDANQWVNTAAEAGVSLMILTAKHHDGFCLWPSKFTEHSVAHSPWKHGRG-DVVQELVNA 140
DAN+W + ++G ++LT+KHH+G+ LW S E S + + G G D+V EL +
Sbjct: 105 FDANEWASIIEKSGAKYVVLTSKHHEGYTLWNS---EQSWNWNSVETGPGIDIVGELTKS 161
Query: 141 AKARGVDVGLYLSPWDRHDPRYGHDLQ----------YNEYYLAQLQELLTRYGDVREIW 190
K G+ +GLY S ++ +P Y D + +E + QL++++T Y + IW
Sbjct: 162 VKNMGLHMGLYHSLFEWFNPLYLADAETGKNPTTQVYVDEILMKQLKDIVTTY-EPELIW 220
Query: 191 FDG--AKGSNAPNMSYYFTDWFAMVKELQSSINIFSDAGPDVRWVGNEKGFAGSTCWSTI 248
DG + SN S F W ++ ++ + G + R N + G+ ++
Sbjct: 221 ADGDWMQLSNYWK-STEFLSWLYTNSSVKDTVIVNDRWGSECR-DKNGGFYTGADHFNPY 278
Query: 249 NRTSLSIGNGSIVDYLSTGDAKGTDWLPAECDVSIRKGWFWHKSETPKKLSELLEIYYNS 308
S N + + Y + G D D + +EL+ +
Sbjct: 279 KLQSHKWENCATIGY-----SYGYDEYEQATDY--------------QNATELIIDLVTT 319
Query: 309 VGRNCVMLLNVPPNTTGLISETDVQRLREFG 339
V LL+V P+ G I V RL E G
Sbjct: 320 VACGGNFLLDVGPDAQGTIPNNMVDRLLEIG 350
>sp|P49713|FUCO_CAEEL Putative alpha-L-fucosidase OS=Caenorhabditis elegans GN=W03G11.3
PE=3 SV=2
Length = 482
Score = 61.2 bits (147), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 69/300 (23%), Positives = 119/300 (39%), Gaps = 42/300 (14%)
Query: 59 VNTFTDSEWGTGNENPEI---FNPLGLDANQWVNTAAEAGVSLMILTAKHHDGFCLWPSK 115
V F D + G + F +ANQ+ T +G + T+KHH+GF +WPS+
Sbjct: 71 VVNFVDKNYKPGTTYADFAKDFTAEYFNANQFAETVKTSGARYFVFTSKHHEGFTMWPSR 130
Query: 116 --FTEHSVAHSPWKHGRGDVVQELVNAAKARGVDVGLYLSPWDRHDPRYGHDLQYNEYY- 172
+ +S+ P + D+V EL +A K V GLY S ++ P + D ++N +
Sbjct: 131 TSWNWNSMDIGP----KRDIVGELRDAFKKTDVHFGLYFSQFEWFHPMFLDDGKFNTTFY 186
Query: 173 -----LAQLQELLTRYGDVREIWFDGA-KGSNAPNMSYYFTDWFAMVKELQSSINIFSDA 226
Q+ +++T+Y + +W DG S+ + F W ++ + +
Sbjct: 187 PEQVSYPQMIDIVTKY-NPEVVWSDGEWDKSDDYWKAKEFLAWLYNSSPVKDQVVV---- 241
Query: 227 GPDVRWVGNEKGFAGSTCWSTINRTSLSIGNGSIVDYLSTGDAKGTDWLPAECDVSIRKG 286
+ RW G G G + D+ G W C +
Sbjct: 242 --NDRWGTGTMGKHG--------------GFMTYSDHYDPGKLLEKKW--ENCMTLDKHS 283
Query: 287 WFWHKSETPKKLS---ELLEIYYNSVGRNCVMLLNVPPNTTGLISETDVQRLREFGTAID 343
W + +++ E++E ++ N +LLNV PN G I RL E G ++
Sbjct: 284 WGNRRDMKASEVNTAYEIIEQLARTIACNGNLLLNVGPNMHGQIPAIFEDRLEEIGRFVN 343
>sp|Q99KR8|FUCO2_MOUSE Plasma alpha-L-fucosidase OS=Mus musculus GN=Fuca2 PE=2 SV=1
Length = 461
Score = 59.3 bits (142), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 89/329 (27%), Positives = 139/329 (42%), Gaps = 58/329 (17%)
Query: 38 LPSFSQ----LKWQQRELIMFLHFGVNTFTDSEWGTGNENPEI-FNPLGLDANQWVNTAA 92
+PSF WQ+ + F+ F N + G E+ + F +ANQW +
Sbjct: 60 VPSFGSEWFWWYWQKEKKPQFVDFMNNNYAP---GFKYEDFVVLFTAKYFNANQWADILQ 116
Query: 93 EAGVSLMILTAKHHDGFCLWPS--KFTEHSVAHSPWKHGRGDVVQELVNAAKAR-GVDVG 149
+G ++ T+KHH+GF +W S + ++V P + D+V+EL A + R G+ G
Sbjct: 117 ASGAKYVVFTSKHHEGFTMWGSDRSWNWNAVDEGP----KRDIVKELEVAVRNRTGLHFG 172
Query: 150 LYLSPWDRHDPRYGHD----LQYNEY----YLAQLQELLTRYGDVREIWFDGAKGSNAPN 201
LY S ++ P + D Q + L +L EL+ RY +W DG G AP+
Sbjct: 173 LYYSLFEWFHPLFLEDQSSSFQKQRFPVSKTLPELYELVNRY-QPEVLWSDGDGG--APD 229
Query: 202 MSYYFTDWFAMVKELQSSINIFSDAGPDVRW-VGNEKGFAG-STCWSTINRTSL---SIG 256
+ T + A L + + + RW VG+ G TC N L
Sbjct: 230 HYWNSTGFLAW---LYNESPVRKTVVTNDRWGVGSICKHGGYYTCSDRYNPGYLLPHKWE 286
Query: 257 NGSIVDYLSTG---DAKGTDWLPAECDVSIRKGWFWHKSETPKKLSELLEIYYNSVGRNC 313
N +D S G +A+ +D+L E E KKL E + + G N
Sbjct: 287 NCMTIDKFSWGYRREAEISDYLTIE--------------ELVKKLVETV-----ACGGN- 326
Query: 314 VMLLNVPPNTTGLISETDVQRLREFGTAI 342
+L+N+ P G I +RLR+ GT +
Sbjct: 327 -LLMNIGPTGDGTIPVIFEERLRQMGTWL 354
>sp|Q9BTY2|FUCO2_HUMAN Plasma alpha-L-fucosidase OS=Homo sapiens GN=FUCA2 PE=1 SV=2
Length = 467
Score = 57.8 bits (138), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 74/315 (23%), Positives = 133/315 (42%), Gaps = 50/315 (15%)
Query: 46 WQQRELIMFLHFGVNTFTDSEWGTGNENPEIFNPLG----LDANQWVNTAAEAGVSLMIL 101
WQ+ ++ ++ F + + S E F PL +ANQW + +G ++L
Sbjct: 78 WQKEKIPKYVEFMKDNYPPSF------KYEDFGPLFTAKFFNANQWADIFQASGAKYIVL 131
Query: 102 TAKHHDGFCLWPSKFT--EHSVAHSPWKHGRGDVVQELVNAAKAR-GVDVGLYLSPWDRH 158
T+KHH+GF LW S+++ +++ P + D+V+EL A + R + GLY S ++
Sbjct: 132 TSKHHEGFTLWGSEYSWNWNAIDEGP----KRDIVKELEVAIRNRTDLRFGLYYSLFEWF 187
Query: 159 DPRYGHDLQYNEY--------YLAQLQELLTRYGDVREIWFDGAKGSNAPNMSYYFTDWF 210
P + D + + L +L EL+ Y +W DG G AP+ + T +
Sbjct: 188 HPLFLEDESSSFHKRQFPVSKTLPELYELVNNY-QPEVLWSDGDGG--APDQYWNSTGFL 244
Query: 211 AMVKELQSSINIFSDAGPDVRWVGNEKGFAGSTCWSTINRTSLSIGNGSIVDYLSTGDAK 270
A +++++ V N++ AGS C G + D + G
Sbjct: 245 AW---------LYNESPVRGTVVTNDRWGAGSIC--------KHGGFYTCSDRYNPGHLL 287
Query: 271 GTDWLPAECDVSIRKGWFWHKSETPK---KLSELLEIYYNSVGRNCVMLLNVPPNTTGLI 327
W C + W + + + EL++ +V +L+N+ P G I
Sbjct: 288 PHKW--ENCMTIDKLSWGYRREAGISDYLTIEELVKQLVETVSCGGNLLMNIGPTLDGTI 345
Query: 328 SETDVQRLREFGTAI 342
S +RLR+ G+ +
Sbjct: 346 SVVFEERLRQMGSWL 360
>sp|Q5RFI5|FUCO2_PONAB Plasma alpha-L-fucosidase OS=Pongo abelii GN=FUCA2 PE=2 SV=1
Length = 465
Score = 57.0 bits (136), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 84/326 (25%), Positives = 139/326 (42%), Gaps = 72/326 (22%)
Query: 46 WQQRELIMFLHFGVNTFTDSEWGTGNENPEIFNPLG----LDANQWVNTAAEAGVSLMIL 101
WQ+ ++ ++ F + + S E F PL +ANQW + +G ++L
Sbjct: 76 WQKEKIPKYVEFMKDNYPPSF------KYEDFGPLFTAKFFNANQWADIFQASGAKYIVL 129
Query: 102 TAKHHDGFCLWPSKFT--EHSVAHSPWKHGRGDVVQELVNAAKAR-GVDVGLYLSPWDRH 158
T+KHH GF LW S+++ +++ P + D+V+EL A + R + GLY S ++
Sbjct: 130 TSKHHKGFTLWGSEYSWNWNAIDEGP----KRDIVKELEVAIRNRTDLRFGLYYSLFEWF 185
Query: 159 DPRYGHDLQYNEY--------YLAQLQELLTRYGDVREIWFDGAKGSNAPNMSYYFTDWF 210
P + D + + L +L EL+ Y +W DG G AP+ + T +
Sbjct: 186 HPLFLEDESSSFHKRQFPVSKTLPELYELVNNY-QPEVLWSDGDGG--APDQYWNSTGFL 242
Query: 211 AMVKELQSSINIFSDAGPDVRWVGNEKGFAGS--------TCWSTINRTSL---SIGNGS 259
A +++++ V N++ AGS TC N L N
Sbjct: 243 AW---------LYNESPVRETVVTNDRWGAGSIYKHGGFYTCSDRYNPGHLLPHKWENCM 293
Query: 260 IVDYLSTG---DAKGTDWLPAECDVSIRKGWFWHKSETPKKLSELLEIYYNSVGRNCVML 316
+D LS G +A +D+L E E K+L E + S G N +L
Sbjct: 294 TIDKLSWGYRREAGISDYLTIE--------------ELVKQLVETV-----SCGGN--LL 332
Query: 317 LNVPPNTTGLISETDVQRLREFGTAI 342
+N+ P G IS +RLR+ G+ +
Sbjct: 333 MNIGPTLDGTISVVFEERLRQMGSWL 358
>sp|C3YWU0|FUCO_BRAFL Alpha-L-fucosidase OS=Branchiostoma floridae GN=BRAFLDRAFT_56888
PE=3 SV=2
Length = 449
Score = 56.6 bits (135), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 72/279 (25%), Positives = 116/279 (41%), Gaps = 45/279 (16%)
Query: 75 EIFNPLGLDANQWVNTAAEAGVSLMILTAKHHDGFCLWPSKFT--EHSVAHSPWKHGRGD 132
E +NPL QW +G ++LT+KHH+GF WPSK++ +SV + P D
Sbjct: 95 EWYNPL-----QWAEVLQASGAKYVVLTSKHHEGFTNWPSKYSWNWNSVDNGP----HRD 145
Query: 133 VVQELVNAAKARG-VDVGLYLSPWDRHDPRYGHDLQ--------YNEYYLAQLQELLTRY 183
+V EL A + + GLY S ++ P Y D Q + LA+L EL+ Y
Sbjct: 146 LVGELAMAIRNNSDLHFGLYYSLFEWFHPLYLKDKQNKWTTQDYTKDVGLAELYELVNAY 205
Query: 184 GDVREIWFDGAKGSNAPNMSYYFTDWFAMVKELQSSINIFSDAGPDVRWVGNEKGFAGST 243
+W DG AP + T++ A +++D+ V N++ +G
Sbjct: 206 -HPEVVWSDG--DWEAPYTYWNSTNFLAW---------LYNDSPVKDTVVTNDRWGSGML 253
Query: 244 CWSTINRTSLSIGNGSIVDYLSTGDAKGTDWLPAECDVSIRKGWFWHKSETPK---KLSE 300
C G + D + G + W C +K W + + T + +
Sbjct: 254 C--------HHGGYYTCSDRYNPGVLQKHKW--ENCMTIDKKSWGFRREATLADYLDMDD 303
Query: 301 LLEIYYNSVGRNCVMLLNVPPNTTGLISETDVQRLREFG 339
L++I +V +L+N+ P G I +RLR G
Sbjct: 304 LVKILAETVSCGGNLLMNIGPTHDGRIVPIFEERLRSMG 342
>sp|Q9VTJ4|FUCO_DROME Putative alpha-L-fucosidase OS=Drosophila melanogaster GN=Fuca PE=2
SV=2
Length = 494
Score = 54.3 bits (129), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 54/200 (27%), Positives = 85/200 (42%), Gaps = 46/200 (23%)
Query: 4 LCCFVCLITILFQLTNLASSKRQQVPTP---------PLPLSPLPSFSQLKWQQRELIMF 54
+ ++ L+ L + A+ QVP P L PLP + + ++ +F
Sbjct: 3 ISAWMPLLVALIVVWISAAEVDAQVPGPRTRYQPNWASLDQRPLPQW----YDDAKVGIF 58
Query: 55 LHFGVNTFTD--SEWGTGN----ENPEI--------------------FNPLGLDANQWV 88
LH+GV + SEW N NPE F +A +W
Sbjct: 59 LHYGVYSVPSFGSEWFWTNWKNLRNPEYVQFMQRNYKPDFTYQEFASQFTAELFNATKWA 118
Query: 89 NTAAEAGVSLMILTAKHHDGFCLWPSK--FTEHSVAHSPWKHGRGDVVQELVNAA-KARG 145
++G ++LT+KHHDGF LWPSK + +S+ P + D+V+EL A K
Sbjct: 119 LLFKDSGARYVVLTSKHHDGFTLWPSKNSYGWNSMDVGP----KRDIVKELAAAIRKESD 174
Query: 146 VDVGLYLSPWDRHDPRYGHD 165
+ GLY S ++ +P + D
Sbjct: 175 LRFGLYYSLFEWFNPLWTDD 194
>sp|Q2KIM0|FUCO_BOVIN Tissue alpha-L-fucosidase OS=Bos taurus GN=FUCA1 PE=2 SV=1
Length = 468
Score = 49.7 bits (117), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 44/147 (29%), Positives = 65/147 (44%), Gaps = 18/147 (12%)
Query: 75 EIFNPLGLDANQWVNTAAEAGVSLMILTAKHHDGFCLWPSKFTEHSVAHSPWKHGRGDVV 134
FNP + W + AG ++LT KHH+G+ WPS + + + H D+V
Sbjct: 116 RFFNP-----DSWADLFKAAGAKYVVLTTKHHEGYTNWPSPVSWNWNSKDVGPH--RDLV 168
Query: 135 QELVNAAKARGVDVGLYLS------PWDRHDPRYGHDLQY--NEYYLAQLQELLTRYGDV 186
EL A + R + GLY S P D + G QY N + +L +L+ RY
Sbjct: 169 GELGTAIRKRNIRYGLYHSLLEWFHPLYLRDKKNGFKTQYFVNAKTMPELYDLVNRYKP- 227
Query: 187 REIWFDGAKGSNAPNMSYYFTDWFAMV 213
IW DG P+ + TD+ A +
Sbjct: 228 DLIWSDGE--WECPDTYWNSTDFLAWL 252
>sp|P48300|FUCO_CANFA Tissue alpha-L-fucosidase OS=Canis familiaris GN=FUCA1 PE=2 SV=1
Length = 465
Score = 47.4 bits (111), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 36/117 (30%), Positives = 58/117 (49%), Gaps = 11/117 (9%)
Query: 85 NQWVNTAAEAGVSLMILTAKHHDGFCLWPSKFTEHSVAHSPWKHGRGDVVQELVNAAKAR 144
+ W + AG ++LT KHH+GF WPS + + ++ H D+V EL A + R
Sbjct: 118 DTWADLFQAAGARYVVLTTKHHEGFTNWPSSVSWNWNSNDVGPH--RDLVGELGRALRKR 175
Query: 145 GVDVGLYLSPWDRHDPRYGHDLQYN---EYY-----LAQLQELLTRYGDVREIWFDG 193
+ GLY S + P Y D + N +++ + +L +L+ RY + IW DG
Sbjct: 176 NIRYGLYHSLLEWFHPLYLLDKKNNFKTQFFVRAKTMPELYDLVNRY-EPDLIWSDG 231
>sp|P17164|FUCO_RAT Tissue alpha-L-fucosidase OS=Rattus norvegicus GN=Fuca1 PE=1 SV=1
Length = 462
Score = 46.6 bits (109), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 37/116 (31%), Positives = 56/116 (48%), Gaps = 11/116 (9%)
Query: 86 QWVNTAAEAGVSLMILTAKHHDGFCLWPSKFTEHSVAHSPWKHGRGDVVQELVNAAKARG 145
+W + AG ++LTAKHH+GF WPS + + + H D+V EL A + R
Sbjct: 115 EWADLFQAAGAKYVVLTAKHHEGFTNWPSAVSWNWNSKDVGPH--RDLVGELGAAVRKRN 172
Query: 146 VDVGLYLSPWDRHDPRYGHD----LQYNEYY----LAQLQELLTRYGDVREIWFDG 193
+ GLY S ++ P Y D L+ + + +L +L+ RY IW DG
Sbjct: 173 IRYGLYHSLFEWFHPLYLLDKKNGLKTQHFVSTKTMPELYDLVNRYKP-DLIWSDG 227
>sp|Q60HF8|FUCO_MACFA Tissue alpha-L-fucosidase OS=Macaca fascicularis GN=FUCA1 PE=2 SV=1
Length = 468
Score = 45.8 bits (107), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 55/210 (26%), Positives = 82/210 (39%), Gaps = 46/210 (21%)
Query: 21 ASSKRQQVPT-PPLPLSPLPSFSQLKWQQRELIMFLHFGVNTFTDSEWGT--------GN 71
A R+ P P L PLPS+ + + + +F+H+GV F+ WG+ G
Sbjct: 33 AQPLRRYTPDWPSLDSRPLPSW----FDEAKFGVFIHWGV--FSVPAWGSEWFWWNWQGE 86
Query: 72 ENPEI--------------------FNPLGLDANQWVNTAAEAGVSLMILTAKHHDGFCL 111
P+ F +W + AG ++LT KHH+GF
Sbjct: 87 GRPQYQRFMRDNYPPGSSYADFGPQFTARFFHPEEWADLFQAAGAKYVVLTTKHHEGFTN 146
Query: 112 WPSKFTEHSVAHSPWKHGRGDVVQELVNAAKARGVDVGLYLSPWDRHDPRY------GHD 165
WPS + + + H D+V EL A + R + GLY S + P Y G
Sbjct: 147 WPSPVSWNWNSKDVGPH--RDLVGELGTALRKRNIRYGLYHSLLEWFHPLYLLDKKNGFK 204
Query: 166 LQY--NEYYLAQLQELLTRYGDVREIWFDG 193
QY + +L +L+ Y IW DG
Sbjct: 205 TQYFVGAKTMPELYDLVNSY-KPDLIWSDG 233
>sp|Q99LJ1|FUCO_MOUSE Tissue alpha-L-fucosidase OS=Mus musculus GN=Fuca1 PE=2 SV=1
Length = 452
Score = 44.7 bits (104), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 28/81 (34%), Positives = 39/81 (48%), Gaps = 2/81 (2%)
Query: 85 NQWVNTAAEAGVSLMILTAKHHDGFCLWPSKFTEHSVAHSPWKHGRGDVVQELVNAAKAR 144
+QW AG ++LT KHH+GF WPS + + + H D+V EL A + R
Sbjct: 104 DQWAELFQAAGAKYVVLTTKHHEGFTNWPSPVSWNWNSKDVGPH--RDLVGELGAAVRKR 161
Query: 145 GVDVGLYLSPWDRHDPRYGHD 165
+ GLY S + P Y D
Sbjct: 162 NIRYGLYHSLLEWFHPLYLLD 182
>sp|P04066|FUCO_HUMAN Tissue alpha-L-fucosidase OS=Homo sapiens GN=FUCA1 PE=1 SV=4
Length = 466
Score = 44.3 bits (103), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 44/171 (25%), Positives = 68/171 (39%), Gaps = 37/171 (21%)
Query: 21 ASSKRQQVPT-PPLPLSPLPSFSQLKWQQRELIMFLHFGVNTFTDSEWGT--------GN 71
A R+ P P L PLP++ + + + +F+H+GV F+ WG+ G
Sbjct: 31 AQPPRRYTPDWPSLDSRPLPAW----FDEAKFGVFIHWGV--FSVPAWGSEWFWWHWQGE 84
Query: 72 ENPEI--------------------FNPLGLDANQWVNTAAEAGVSLMILTAKHHDGFCL 111
P+ F +W + AG ++LT KHH+GF
Sbjct: 85 GRPQYQRFMRDNYPPGFSYADFGPQFTARFFHPEEWADLFQAAGAKYVVLTTKHHEGFTN 144
Query: 112 WPSKFTEHSVAHSPWKHGRGDVVQELVNAAKARGVDVGLYLSPWDRHDPRY 162
WPS + + + H D+V EL A + R + GLY S + P Y
Sbjct: 145 WPSPVSWNWNSKDVGPH--RDLVGELGTALRKRNIRYGLYHSLLEWFHPLY 193
>sp|C5A3G3|COAD_THEGJ Phosphopantetheine adenylyltransferase OS=Thermococcus
gammatolerans (strain DSM 15229 / JCM 11827 / EJ3)
GN=coaD PE=3 SV=1
Length = 159
Score = 37.4 bits (85), Expect = 0.30, Method: Composition-based stats.
Identities = 26/81 (32%), Positives = 41/81 (50%), Gaps = 5/81 (6%)
Query: 409 FNVIRIQEAIGLGQRIKRHEIFVDGKLVAEGTTVGHKKLHRLENGVIDGHVVRIKIKESR 468
+ +I+I AIG RIK E V + +G + ++ R E G+ +V IK+ +SR
Sbjct: 76 YRIIKINTAIGFADRIKSLEAIVVSEETYKGALLVNRA--REERGLKPLEIVTIKLVKSR 133
Query: 469 AVPLISSIGLH---FDPYWHP 486
P ISS + DP+ +P
Sbjct: 134 IGPKISSTLIRAGLIDPFGNP 154
>sp|A3PBG1|Y463_PROM0 UPF0284 protein P9301_04631 OS=Prochlorococcus marinus (strain MIT
9301) GN=P9301_04631 PE=3 SV=1
Length = 385
Score = 35.8 bits (81), Expect = 0.74, Method: Compositional matrix adjust.
Identities = 21/70 (30%), Positives = 34/70 (48%), Gaps = 1/70 (1%)
Query: 417 AIGLGQRIKRHEIFVDGKLVAEGTTVGHK-KLHRLENGVIDGHVVRIKIKESRAVPLISS 475
A G+ + +R D + + EG + GHK KL L GV + + K A P+I
Sbjct: 53 AAGINPKSRRTTALADAEFLLEGASKGHKYKLPLLNAGVTPALISHVCSKLINAYPVIVP 112
Query: 476 IGLHFDPYWH 485
+G+ PY++
Sbjct: 113 LGIGVKPYFN 122
>sp|A3CLS3|DDL_STRSV D-alanine--D-alanine ligase OS=Streptococcus sanguinis (strain
SK36) GN=ddl PE=3 SV=2
Length = 348
Score = 34.7 bits (78), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 19/57 (33%), Positives = 30/57 (52%), Gaps = 5/57 (8%)
Query: 380 LRTYWAPRDGDGISDDHWIEIRAADEGLRFNVIRIQEAIGLGQRIKRHEIFVDGKLV 436
++TY+ +DGD I + AADE L N + + Q+IK +I+ DG +V
Sbjct: 38 VKTYFITKDGDFIQTQEFEAKPAADEKLMTNA-----TVDMSQKIKPSDIYEDGAVV 89
>sp|O05975|Y785_RICPR Uncharacterized protein RP785 OS=Rickettsia prowazekii (strain
Madrid E) GN=RP785 PE=4 SV=2
Length = 1169
Score = 33.9 bits (76), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 20/44 (45%), Positives = 25/44 (56%), Gaps = 7/44 (15%)
Query: 455 IDGHVVRIKIKESRA------VPLISSIGLHFDPY-WHPNRQSL 491
+DG VV +K + A V LIS G+H DP W+PNRQ L
Sbjct: 196 VDGQVVTLKSPKLCAYSDPGLVNLISDSGIHLDPMDWNPNRQPL 239
>sp|Q8CSF2|AROK_STAES Shikimate kinase OS=Staphylococcus epidermidis (strain ATCC 12228)
GN=aroK PE=3 SV=1
Length = 170
Score = 33.9 bits (76), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 40/132 (30%), Positives = 57/132 (43%), Gaps = 25/132 (18%)
Query: 193 GAKGSNAPNMSYYFTDWFAMVKELQSSINIFSDAGPDVRWVGNEKGFAG------STCWS 246
G S+ N+SY D F V E +S NIF+D G EKGF +C +
Sbjct: 22 GKYLSDLYNLSYVDLDNFIEVNECKSIPNIFNDIG--------EKGFRSLETRYLKSCLN 73
Query: 247 TINRTSLSIGNGSIVDYLS---TGDAKGTDWLPAECDVSIRKGWFWHKSETP----KKLS 299
T + +S G G I D S + K WL +CD+ I + S P K L+
Sbjct: 74 TFD--IISTGGGIIEDTNSLKLLKNQKHVVWL--DCDIEIIFKRVKNDSHRPNAKSKNLN 129
Query: 300 ELLEIYYNSVGR 311
+L +Y + + R
Sbjct: 130 QLDALYSSRLSR 141
>sp|Q5HP11|AROK_STAEQ Shikimate kinase OS=Staphylococcus epidermidis (strain ATCC 35984 /
RP62A) GN=aroK PE=3 SV=2
Length = 170
Score = 33.9 bits (76), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 40/132 (30%), Positives = 57/132 (43%), Gaps = 25/132 (18%)
Query: 193 GAKGSNAPNMSYYFTDWFAMVKELQSSINIFSDAGPDVRWVGNEKGFAG------STCWS 246
G S+ N+SY D F V E +S NIF+D G EKGF +C +
Sbjct: 22 GKYLSDLYNLSYVDLDNFIEVNECKSIPNIFNDIG--------EKGFRSLETRYLKSCLN 73
Query: 247 TINRTSLSIGNGSIVDYLS---TGDAKGTDWLPAECDVSIRKGWFWHKSETP----KKLS 299
T + +S G G I D S + K WL +CD+ I + S P K L+
Sbjct: 74 TFD--IISTGGGIIEDTNSLKLLKNQKHVVWL--DCDIEIIFKRVKNDSHRPNAKSKNLN 129
Query: 300 ELLEIYYNSVGR 311
+L +Y + + R
Sbjct: 130 QLDALYSSRLSR 141
>sp|Q8E079|GLGA_STRA5 Glycogen synthase OS=Streptococcus agalactiae serotype V (strain
ATCC BAA-611 / 2603 V/R) GN=glgA PE=3 SV=1
Length = 476
Score = 32.3 bits (72), Expect = 8.5, Method: Compositional matrix adjust.
Identities = 23/83 (27%), Positives = 39/83 (46%), Gaps = 15/83 (18%)
Query: 129 GRGDVVQELVNAAKARGVDVGLYLSPWDRHDPRYGHDLQYNEYYLAQLQELLTRYGDVRE 188
G GDV+ L + +G DV + + +D D ++G Q++ L+ Y DV
Sbjct: 18 GLGDVIGALPKSLSKKGHDVAVVMPYYDMVDQKFGD----------QIENLMYFYTDVG- 66
Query: 189 IW---FDGAKGSNAPNMSYYFTD 208
W + G K + N+++YF D
Sbjct: 67 -WRHQYVGVKRLSQDNVTFYFID 88
>sp|Q3K1K2|GLGA_STRA1 Glycogen synthase OS=Streptococcus agalactiae serotype Ia (strain
ATCC 27591 / A909 / CDC SS700) GN=glgA PE=3 SV=1
Length = 476
Score = 32.3 bits (72), Expect = 8.5, Method: Compositional matrix adjust.
Identities = 23/83 (27%), Positives = 39/83 (46%), Gaps = 15/83 (18%)
Query: 129 GRGDVVQELVNAAKARGVDVGLYLSPWDRHDPRYGHDLQYNEYYLAQLQELLTRYGDVRE 188
G GDV+ L + +G DV + + +D D ++G Q++ L+ Y DV
Sbjct: 18 GLGDVIGALPKSLSKKGHDVAVVMPYYDMVDQKFGD----------QIENLMYFYTDVG- 66
Query: 189 IW---FDGAKGSNAPNMSYYFTD 208
W + G K + N+++YF D
Sbjct: 67 -WRHQYVGVKRLSQDNVTFYFID 88
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.320 0.137 0.439
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 199,947,094
Number of Sequences: 539616
Number of extensions: 9099354
Number of successful extensions: 20390
Number of sequences better than 100.0: 27
Number of HSP's better than 100.0 without gapping: 16
Number of HSP's successfully gapped in prelim test: 11
Number of HSP's that attempted gapping in prelim test: 20339
Number of HSP's gapped (non-prelim): 36
length of query: 492
length of database: 191,569,459
effective HSP length: 122
effective length of query: 370
effective length of database: 125,736,307
effective search space: 46522433590
effective search space used: 46522433590
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 63 (28.9 bits)