BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 011178
(491 letters)
Database: pdbaa
62,578 sequences; 14,973,337 total letters
Searching..................................................done
>pdb|1AOZ|A Chain A, Refined Crystal Structure Of Ascorbate Oxidase At 1.9
Angstroms Resolution
pdb|1AOZ|B Chain B, Refined Crystal Structure Of Ascorbate Oxidase At 1.9
Angstroms Resolution
pdb|1ASO|A Chain A, X-Ray Structures And Mechanistic Implications Of Three
Functional Derivatives Of Ascorbate Oxidase From
Zucchini: Reduced-, Peroxide-, And Azide-Forms
pdb|1ASO|B Chain B, X-Ray Structures And Mechanistic Implications Of Three
Functional Derivatives Of Ascorbate Oxidase From
Zucchini: Reduced-, Peroxide-, And Azide-Forms
pdb|1ASP|A Chain A, X-ray Structures And Mechanistic Implications Of Three
Functional Derivatives Of Ascorbate Oxidase From
Zucchini: Reduced-, Peroxide-, And Azide-forms
pdb|1ASP|B Chain B, X-ray Structures And Mechanistic Implications Of Three
Functional Derivatives Of Ascorbate Oxidase From
Zucchini: Reduced-, Peroxide-, And Azide-forms
pdb|1ASQ|A Chain A, X-Ray Structures And Mechanistic Implications Of Three
Functional Derivatives Of Ascorbate Oxidase From
Zucchini: Reduced-, Peroxide-, And Azide-Forms
pdb|1ASQ|B Chain B, X-Ray Structures And Mechanistic Implications Of Three
Functional Derivatives Of Ascorbate Oxidase From
Zucchini: Reduced-, Peroxide-, And Azide-Forms
Length = 552
Score = 125 bits (314), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 133/526 (25%), Positives = 207/526 (39%), Gaps = 71/526 (13%)
Query: 5 NHFSSLGCSLITHLYTHLVVLNFIYMAPLITLNGVQQRRNSWQDGVYG-TNCPIPPGKNF 63
N S+ L L+T VV+++ +G+ QR W DG + C I PG+ F
Sbjct: 39 NAGDSVVVELTNKLHTEGVVIHW---------HGILQRGTPWADGTASISQCAINPGETF 89
Query: 64 TYVLQVKDQIGSYFYFPSLAFHXXXXXXXXXXXXSRPLIPVPFDPPAGDFTILAGDWYKK 123
Y V D G++FY L PF G+ +L DW+ +
Sbjct: 90 FYNFTV-DNPGTFFYHGHLGMQRSAGLYGSLIVDPPQGKKEPFHY-DGEINLLLSDWWHQ 147
Query: 124 NHTDLKAILDSGSD--LPFPDGLVINGRG-----------SNAN-------------TFT 157
+ + L S + P +++NGRG SN F
Sbjct: 148 SIHKQEVGLSSKPIRWIGEPQTILLNGRGQFDCSIAAKYDSNLEPCKLKGSESCAPYIFH 207
Query: 158 VDQGKTYRFRISNVGISTSINFRIQGHKMLLVEVEGTHTLQNTYDSLDIHLGQSYSVLVR 217
V KTYR RI++ ++NF I H++L+VE +G + +DI+ G+SYSVL+
Sbjct: 208 VSPKKTYRIRIASTTALAALNFAIGNHQLLVVEADGNYVQPFYTSDIDIYSGESYSVLIT 267
Query: 218 ADQ-PPQGYYIVISTRFT-SQVLSATSVLHYXXXXXXXXXXXXXXXTTQIDWSLEQARSL 275
DQ P + Y++ + TR ++L+Y T D +++++
Sbjct: 268 TDQNPSENYWVSVGTRARHPNTPPGLTLLNYLPNSVSKLPTSPPPQTPAWD-DFDRSKNF 326
Query: 276 RRNLTASGPRPNPQGSYHYGLINTTHTIRLQNTAPTINGKQRYAVNSVSFIPADTP---- 331
+TA+ P P + I L NT ING ++A+N VS TP
Sbjct: 327 TYRITAAMGSPKPP-------VKFNRRIFLLNTQNVINGYVKWAINDVSLALPPTPYLGA 379
Query: 332 -----LKLADYFKIPGVFSVGSIPDNP-------TGGGAY-LQTSVMAADFRGFAEVVFE 378
L D P VF D P G G Y + + A ++ E
Sbjct: 380 MKYNLLHAFDQNPPPEVFPEDYDIDTPPTNEKTRIGNGVYQFKIGEVVDVILQNANMMKE 439
Query: 379 NPEDTLQSWHIDGHNFFAVGMDGGEWTPASRLTYNLRDTISRCTVQVYPKSWTAVYVPLD 438
N +T WH+ GH+F+ +G G+++ + NL++ R TV ++P WTA+ D
Sbjct: 440 NLSET-HPWHLHGHDFWVLGYGDGKFSAEEESSLNLKNPPLRNTVVIFPYGWTAIRFVAD 498
Query: 439 NVGMWNIRSENWARQYLGQQFYLRVYSSANSWRDEYPIPSNALLCG 484
N G+W ++G A IP+ AL CG
Sbjct: 499 NPGVWAFHCHIEPHLHMGMGVVF-----AEGVEKVGRIPTKALACG 539
>pdb|4A2F|A Chain A, Coriolopsis Gallica Laccase Collected At 12.65 Kev
Length = 497
Score = 84.3 bits (207), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 64/206 (31%), Positives = 92/206 (44%), Gaps = 28/206 (13%)
Query: 37 NGVQQRRNSWQDG-VYGTNCPIPPGKNFTYVLQVKDQIGSYFYFPSLAFHXXXXXXXXXX 95
+G Q +W DG + CPI G F Y QV DQ G+++Y H
Sbjct: 66 HGFFQHGTNWADGPAFVNQCPISTGHAFLYDFQVPDQAGTFWY------HSHLSTQYCDG 119
Query: 96 XXSRPLIPVPFDPPAG------DFTILA-GDWYKKNHTDLKAILDSGSDLPFPDGLVING 148
++ P DP A D T++ DWY H K G+ +P D +ING
Sbjct: 120 LRGPIVVYDPNDPHASLYDVDDDSTVITLADWY---HLAAKV----GAPVPTADATLING 172
Query: 149 RGSNANTF-------TVDQGKTYRFRISNVGISTSINFRIQGHKMLLVEVEGTHTLQNTY 201
G +A T TV +GK YRFR+ ++ + F I GH + ++E + + +T
Sbjct: 173 LGRSAATLAADLAVITVTKGKRYRFRLVSLSCDPNYTFSIDGHSLTVIEADSVNLKPHTV 232
Query: 202 DSLDIHLGQSYSVLVRADQPPQGYYI 227
DSL I Q YS ++ ADQ Y+I
Sbjct: 233 DSLQIFAAQRYSFVLNADQDVDNYWI 258
>pdb|4A2D|A Chain A, Coriolopsis Gallica Laccase T2 Copper Depleted At Ph 4.5
pdb|4A2E|A Chain A, Crystal Structure Of A Coriolopsis Gallica Laccase At 1.7
A Resolution Ph 5.5
pdb|4A2H|A Chain A, Crystal Structure Of Laccase From Coriolopsis Gallica Ph
7.0
pdb|4A2G|A Chain A, Coriolopsis Gallica Laccase Collected At 8.98 Kev
Length = 496
Score = 84.3 bits (207), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 64/206 (31%), Positives = 92/206 (44%), Gaps = 28/206 (13%)
Query: 37 NGVQQRRNSWQDG-VYGTNCPIPPGKNFTYVLQVKDQIGSYFYFPSLAFHXXXXXXXXXX 95
+G Q +W DG + CPI G F Y QV DQ G+++Y H
Sbjct: 66 HGFFQHGTNWADGPAFVNQCPISTGHAFLYDFQVPDQAGTFWY------HSHLSTQYCDG 119
Query: 96 XXSRPLIPVPFDPPAG------DFTILA-GDWYKKNHTDLKAILDSGSDLPFPDGLVING 148
++ P DP A D T++ DWY H K G+ +P D +ING
Sbjct: 120 LRGPIVVYDPNDPHASLYDVDDDSTVITLADWY---HLAAKV----GAPVPTADATLING 172
Query: 149 RGSNANTF-------TVDQGKTYRFRISNVGISTSINFRIQGHKMLLVEVEGTHTLQNTY 201
G +A T TV +GK YRFR+ ++ + F I GH + ++E + + +T
Sbjct: 173 LGRSAATLAADLAVITVTKGKRYRFRLVSLSCDPNYTFSIDGHSLTVIEADSVNLKPHTV 232
Query: 202 DSLDIHLGQSYSVLVRADQPPQGYYI 227
DSL I Q YS ++ ADQ Y+I
Sbjct: 233 DSLQIFAAQRYSFVLNADQDVDNYWI 258
>pdb|1HFU|A Chain A, Type-2 Cu-Depleted Laccase From Coprinus Cinereus At 1.68
A Resolution
Length = 503
Score = 83.2 bits (204), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 60/204 (29%), Positives = 92/204 (45%), Gaps = 18/204 (8%)
Query: 34 ITLNGVQQRRNSWQDGVYGTN-CPIPPGKNFTYVLQVKDQIGSYFYFPSLA--FHXXXXX 90
I +G+ QR +W DG G N CPI PG F Y G+++Y +
Sbjct: 63 IHWHGLFQRGTNWADGADGVNQCPISPGHAFLYKFTPAGHAGTFWYHSHFGTQYCDGLRG 122
Query: 91 XXXXXXXSRPLIPVPFDPPAGDFTILAGDWYKKNHTDLKAILDSGSDLPFPDGLVINGRG 150
+ P + +D + I DWY H +I + PD +ING+G
Sbjct: 123 PMVIYDDNDPHAAL-YDEDDENTIITLADWY---HIPAPSIQGAAQ----PDATLINGKG 174
Query: 151 -------SNANTFTVDQGKTYRFRISNVGISTSINFRIQGHKMLLVEVEGTHTLQNTYDS 203
+ + V+QGK YR R+ ++ + F I GH++ ++EV+G T +T D
Sbjct: 175 RYVGGPAAELSIVNVEQGKKYRMRLISLSCDPNWQFSIDGHELTIIEVDGELTEPHTVDR 234
Query: 204 LDIHLGQSYSVLVRADQPPQGYYI 227
L I GQ YS ++ A+QP Y+I
Sbjct: 235 LQIFTGQRYSFVLDANQPVDNYWI 258
>pdb|1A65|A Chain A, Type-2 Cu-depleted Laccase From Coprinus Cinereus
Length = 504
Score = 83.2 bits (204), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 60/204 (29%), Positives = 92/204 (45%), Gaps = 18/204 (8%)
Query: 34 ITLNGVQQRRNSWQDGVYGTN-CPIPPGKNFTYVLQVKDQIGSYFYFPSLA--FHXXXXX 90
I +G+ QR +W DG G N CPI PG F Y G+++Y +
Sbjct: 63 IHWHGLFQRGTNWADGADGVNQCPISPGHAFLYKFTPAGHAGTFWYHSHFGTQYCDGLRG 122
Query: 91 XXXXXXXSRPLIPVPFDPPAGDFTILAGDWYKKNHTDLKAILDSGSDLPFPDGLVINGRG 150
+ P + +D + I DWY H +I + PD +ING+G
Sbjct: 123 PMVIYDDNDPHAAL-YDEDDENTIITLADWY---HIPAPSIQGAAQ----PDATLINGKG 174
Query: 151 -------SNANTFTVDQGKTYRFRISNVGISTSINFRIQGHKMLLVEVEGTHTLQNTYDS 203
+ + V+QGK YR R+ ++ + F I GH++ ++EV+G T +T D
Sbjct: 175 RYVGGPAAELSIVNVEQGKKYRMRLISLSCDPNWQFSIDGHELTIIEVDGELTEPHTVDR 234
Query: 204 LDIHLGQSYSVLVRADQPPQGYYI 227
L I GQ YS ++ A+QP Y+I
Sbjct: 235 LQIFTGQRYSFVLDANQPVDNYWI 258
>pdb|1KYA|A Chain A, Active Laccase From Trametes Versicolor Complexed With
2,5-Xylidine
pdb|1KYA|B Chain B, Active Laccase From Trametes Versicolor Complexed With
2,5-Xylidine
pdb|1KYA|C Chain C, Active Laccase From Trametes Versicolor Complexed With
2,5-Xylidine
pdb|1KYA|D Chain D, Active Laccase From Trametes Versicolor Complexed With
2,5-Xylidine
Length = 499
Score = 79.7 bits (195), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 64/216 (29%), Positives = 92/216 (42%), Gaps = 29/216 (13%)
Query: 34 ITLNGVQQRRNSWQDG-VYGTNCPIPPGKNFTYVLQVKDQIGSYFYFPSLAFHXXXXXXX 92
I +G Q+ +W DG + CPI G +F Y QV DQ G+++Y H
Sbjct: 63 IHWHGFFQKGTNWADGPAFINQCPISSGHSFLYDFQVPDQAGTFWY------HSHLSTQY 116
Query: 93 XXXXXSRPLIPVPFDPPAG-------DFTILAGDWYKKNHTDLKAILDSGSDLPF-PDGL 144
++ P DP A D I DWY H K G P D
Sbjct: 117 CDGLRGPFVVYDPNDPAADLYDVDNDDTVITLVDWY---HVAAKL----GPAFPLGADAT 169
Query: 145 VINGRGSNANTFTVD-------QGKTYRFRISNVGISTSINFRIQGHKMLLVEVEGTHTL 197
+ING+G + +T T D GK YRFR+ ++ + F I GH M ++E + +T
Sbjct: 170 LINGKGRSPSTTTADLSVISVTPGKRYRFRLVSLSCDPNYTFSIDGHNMTIIETDSINTA 229
Query: 198 QNTYDSLDIHLGQSYSVLVRADQPPQGYYIVISTRF 233
DS+ I Q YS ++ A+Q Y+I + F
Sbjct: 230 PLVVDSIQIFAAQRYSFVLEANQAVDNYWIRANPNF 265
>pdb|3FPX|A Chain A, Native Fungus Laccase From Trametes Hirsuta
pdb|3V9C|A Chain A, Type-2 Cu-Depleted Fungus Laccase From Trametes Hirsuta At
Low Dose Of Ionization Radiation
Length = 499
Score = 79.3 bits (194), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 84/320 (26%), Positives = 130/320 (40%), Gaps = 48/320 (15%)
Query: 34 ITLNGVQQRRNSWQDG-VYGTNCPIPPGKNFTYVLQVKDQIGSYFYFPSLAFHXXXXXXX 92
I +G Q +W DG + CPI PG +F Y QV DQ G+++Y H
Sbjct: 63 IHWHGFFQHGTNWADGPAFINQCPISPGHSFLYDFQVPDQAGTFWY------HSHLSTQY 116
Query: 93 XXXXXSRPLIPVPFDPPAG-------DFTILAGDWYKKNHTDLKAILDSGSDLPF-PDGL 144
++ P DP A D I DWY HT K G P D
Sbjct: 117 CDGLRGPFVVYDPNDPHASRYDVDNDDTVITLADWY---HTAAKL----GPRFPGGADAT 169
Query: 145 VINGRG-------SNANTFTVDQGKTYRFRISNVGISTSINFRIQGHKMLLVEVEGTHTL 197
+ING+G + + V +GK YRFR+ ++ + + F I GH + ++EV+ ++
Sbjct: 170 LINGKGRAPSDSVAELSVIKVTKGKRYRFRLVSLSCNPNHTFSIDGHNLTIIEVDSVNSQ 229
Query: 198 QNTYDSLDIHLGQSYSVLVRADQPPQGYYIVISTRFTSQVLSA---TSVLHYXXXXXXXX 254
DS+ I Q YS ++ A+Q Y+I + F + +++L Y
Sbjct: 230 PLEVDSIQIFAAQRYSFVLDANQAVDNYWIRANPNFGNVGFDGGINSAILRY-------D 282
Query: 255 XXXXXXXTTQIDWSLEQARSLRRNLTASGPRPNPQGSYHYGLINTTHTIRLQNTAPTING 314
TT S++ + + S P P GS G ++ + N A NG
Sbjct: 283 GAPAVEPTTNQTTSVKPLNEVDLHPLVSTPVP---GSPSSGGVD-----KAINMAFNFNG 334
Query: 315 KQRYAVNSVSFIPADTPLKL 334
+ +N SF+P P+ L
Sbjct: 335 SNFF-INGASFVPPTVPVLL 353
>pdb|2HRG|A Chain A, Crystal Structure Of Blue Laccase From Trametes Trogii
Complexed With P-Methylbenzoate
pdb|2HRH|A Chain A, Crystal Strucure Of Blue Laccase From Trametes Trogii
Length = 496
Score = 78.6 bits (192), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 63/209 (30%), Positives = 91/209 (43%), Gaps = 28/209 (13%)
Query: 34 ITLNGVQQRRNSWQDG-VYGTNCPIPPGKNFTYVLQVKDQIGSYFYFPSLAFHXXXXXXX 92
I +G Q +W DG + CPI G F Y QV DQ G+++Y H
Sbjct: 63 IHWHGFFQHGTNWADGPAFVNQCPISTGHAFLYDFQVPDQAGTFWY------HSHLSTQY 116
Query: 93 XXXXXSRPLIPVPFDPPAG------DFTILA-GDWYKKNHTDLKAILDSGSDLPFPDGLV 145
++ P DP D T++ DWY H K GS +P D +
Sbjct: 117 CDGLRGPIVVYDPQDPHKSLYDVDDDSTVITLADWY---HLAAKV----GSPVPTADATL 169
Query: 146 INGRGSNANTF-------TVDQGKTYRFRISNVGISTSINFRIQGHKMLLVEVEGTHTLQ 198
ING G + +T TV +GK YRFR+ ++ + F I GH + ++E + +
Sbjct: 170 INGLGRSIDTLNADLAVITVTKGKRYRFRLVSLSCDPNHVFSIDGHSLTVIEADSVNLKP 229
Query: 199 NTYDSLDIHLGQSYSVLVRADQPPQGYYI 227
T DS+ I Q YS ++ ADQ Y+I
Sbjct: 230 QTVDSIQIFAAQRYSFVLNADQDVGNYWI 258
>pdb|3DIV|A Chain A, Crystal Structure Of Laccase From Cerrena Maxima At 1.76a
Resolution
Length = 499
Score = 78.6 bits (192), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 81/316 (25%), Positives = 130/316 (41%), Gaps = 48/316 (15%)
Query: 38 GVQQRRNSWQDG-VYGTNCPIPPGKNFTYVLQVKDQIGSYFYFPSLAFHXXXXXXXXXXX 96
G Q+ +W DG + CPI PG +F Y QV +Q G+++Y H
Sbjct: 67 GFFQQGTNWADGPAFINQCPISPGHSFLYDFQVPNQAGTFWY------HSHLSTQYCDGL 120
Query: 97 XSRPLIPVPFDPPAG-------DFTILAGDWYKKNHTDLKAILDSGSDLPF-PDGLVING 148
++ P DP A D I DWY HT K G P D +ING
Sbjct: 121 RGPFVVYDPNDPHASRYDVDNDDTVITLADWY---HTAAKL----GPRFPAGADATLING 173
Query: 149 RG-------SNANTFTVDQGKTYRFRISNVGISTSINFRIQGHKMLLVEVEGTHTLQNTY 201
+G + + V +GK RFR+ ++ + F I GH + ++EV+ +++ +
Sbjct: 174 KGRAPSDTSAELSVIKVTKGKRXRFRLVSLSCDPNFTFSIDGHNLTIIEVDSSNSQPLSV 233
Query: 202 DSLDIHLGQSYSVLVRADQPPQGYYIVISTRFTSQVLSA---TSVLHYXXXXXXXXXXXX 258
DS+ I Q YS ++ A+Q Y+I + F + + +++L Y
Sbjct: 234 DSIQIFAAQRYSFVLNANQAVDNYWIRANPNFGNVGFNGGINSAILRY-------DGAPA 286
Query: 259 XXXTTQIDWSLEQARSLRRNLTASGPRPNPQGSYHYGLINTTHTIRLQNTAPTINGKQRY 318
TT S++ + + S P P GS G ++ + N A NG +
Sbjct: 287 VEPTTNQTTSVKPLNEVNLHPLVSTPVP---GSPSSGGVD-----KAINMAFNFNGSNFF 338
Query: 319 AVNSVSFIPADTPLKL 334
+N SF+P P+ L
Sbjct: 339 -INGASFVPPSVPVLL 353
>pdb|3PXL|A Chain A, Type-2 Cu-Depleted Fungus Laccase From Trametes Hirsuta
Length = 499
Score = 78.6 bits (192), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 83/320 (25%), Positives = 130/320 (40%), Gaps = 48/320 (15%)
Query: 34 ITLNGVQQRRNSWQDG-VYGTNCPIPPGKNFTYVLQVKDQIGSYFYFPSLAFHXXXXXXX 92
I +G Q +W DG + CPI PG +F Y QV DQ G+++Y H
Sbjct: 63 IHWHGFFQHGTNWADGPAFINQCPISPGHSFLYDFQVPDQAGTFWY------HSHLSTQY 116
Query: 93 XXXXXSRPLIPVPFDPPAG-------DFTILAGDWYKKNHTDLKAILDSGSDLPF-PDGL 144
++ P DP A D I DWY HT K G P D
Sbjct: 117 CDGLRGPFVVYDPNDPHASRYDVDNDDTVITLADWY---HTAAKL----GPRFPGGADAT 169
Query: 145 VINGRG-------SNANTFTVDQGKTYRFRISNVGISTSINFRIQGHKMLLVEVEGTHTL 197
+ING+G + + V +GK YRFR+ ++ + + F I GH + ++EV+ ++
Sbjct: 170 LINGKGRAPSDSVAELSVIKVTKGKRYRFRLVSLSCNPNHTFSIDGHNLTIIEVDSVNSQ 229
Query: 198 QNTYDSLDIHLGQSYSVLVRADQPPQGYYIVISTRFTSQVLSA---TSVLHYXXXXXXXX 254
DS+ I Q YS ++ A+Q Y+I + F + +++L Y
Sbjct: 230 PLEVDSIQIFAAQRYSFVLDANQAVDNYWIRANPNFGNVGFDGGINSAILRY-------D 282
Query: 255 XXXXXXXTTQIDWSLEQARSLRRNLTASGPRPNPQGSYHYGLINTTHTIRLQNTAPTING 314
TT S++ + + S P P G+ G ++ + N A NG
Sbjct: 283 GAPAVEPTTNQTTSVKPLNEVDLHPLVSTPVP---GAPSSGGVD-----KAINMAFNFNG 334
Query: 315 KQRYAVNSVSFIPADTPLKL 334
+ +N SF+P P+ L
Sbjct: 335 SNFF-INGASFVPPTVPVLL 353
>pdb|2XYB|A Chain A, Crystal Structure Of A Fully Functional Laccase From The
Ligninolytic Fungus Pycnoporus Cinnabarinus
Length = 497
Score = 77.4 bits (189), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 65/216 (30%), Positives = 90/216 (41%), Gaps = 29/216 (13%)
Query: 34 ITLNGVQQRRNSWQDG-VYGTNCPIPPGKNFTYVLQVKDQIGSYFYFPSLAFHXXXXXXX 92
I +G Q+ +W DG + CPI G +F Y QV DQ G+++Y H
Sbjct: 63 IHWHGFFQQGTNWADGPAFVNQCPIASGHSFLYDFQVPDQAGTFWY------HSHLSTQY 116
Query: 93 XXXXXSRPLIPVPFDPPAG-------DFTILAGDWYKKNHTDLKAILDSGSDLPF-PDGL 144
++ P DP A D I DWY H K G PF D
Sbjct: 117 CDGLRGPFVVYDPNDPHASLYDIDNDDTVITLADWY---HVAAKL----GPRFPFGSDST 169
Query: 145 VINGRG-------SNANTFTVDQGKTYRFRISNVGISTSINFRIQGHKMLLVEVEGTHTL 197
+ING G S+ V QGK YRFR+ ++ + F I H M ++E + +T
Sbjct: 170 LINGLGRTTGIAPSDLAVIKVTQGKRYRFRLVSLSCDPNHTFSIDNHTMTIIEADSINTQ 229
Query: 198 QNTYDSLDIHLGQSYSVLVRADQPPQGYYIVISTRF 233
DS+ I Q YS ++ A QP Y+I + F
Sbjct: 230 PLEVDSIQIFAAQRYSFVLDASQPVDNYWIRANPAF 265
>pdb|3KW7|A Chain A, Crystal Structure Of Lacb From Trametes Sp. Ah28-2
pdb|3KW7|B Chain B, Crystal Structure Of Lacb From Trametes Sp. Ah28-2
Length = 502
Score = 76.6 bits (187), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 64/206 (31%), Positives = 92/206 (44%), Gaps = 29/206 (14%)
Query: 38 GVQQRRNSWQDG-VYGTNCPIPPGKNFTYVLQVKDQIGSYFYFPSLAFHXXXXXXXXXXX 96
G+ Q +W DG + CPI G +F Y V DQ G+++Y L+
Sbjct: 67 GLFQHGTNWADGPAFVNQCPIASGNSFLYDFTVPDQAGTFWYHSHLS-------TQYCDG 119
Query: 97 XSRPLIPV-PFDPPAG------DFTILA-GDWYKKNHTDLKAILDSGSDLPFPDGLVING 148
PL+ P DP A D T++ DWY HT K + P D ++ING
Sbjct: 120 LRGPLVVYDPSDPYASMYDVDDDTTVITLSDWY---HTAAKL---GPAFPPNADSVLING 173
Query: 149 RG-------SNANTFTVDQGKTYRFRISNVGISTSINFRIQGHKMLLVEVEGTHTLQNTY 201
G S+ TV+Q K YRFR+ ++ + F I GH M ++EV+G +
Sbjct: 174 LGRFAGGNASDLAVITVEQNKRYRFRLVSLSCDPNFTFSIDGHNMTIIEVDGVNHEPLEV 233
Query: 202 DSLDIHLGQSYSVLVRADQPPQGYYI 227
DS+ I Q YS ++ A Q Y+I
Sbjct: 234 DSIQIFASQRYSFVLNATQSVDNYWI 259
>pdb|3T6V|A Chain A, Crystal Structure Of Laccase From Steccherinum Ochraceum
pdb|3T6V|B Chain B, Crystal Structure Of Laccase From Steccherinum Ochraceum
pdb|3T6V|C Chain C, Crystal Structure Of Laccase From Steccherinum Ochraceum
pdb|3T6W|A Chain A, Crystal Structure Of Steccherinum Ochraceum Laccase
Obtained By Multi- Crystals Composite Data Collection
Technique (10% Dose)
pdb|3T6W|B Chain B, Crystal Structure Of Steccherinum Ochraceum Laccase
Obtained By Multi- Crystals Composite Data Collection
Technique (10% Dose)
pdb|3T6W|C Chain C, Crystal Structure Of Steccherinum Ochraceum Laccase
Obtained By Multi- Crystals Composite Data Collection
Technique (10% Dose)
pdb|3T6X|A Chain A, Crystal Structure Of Steccherinum Ochraceum Laccase
Obtained By Multi- Crystals Composite Data Collection
Technique (20% Dose)
pdb|3T6X|B Chain B, Crystal Structure Of Steccherinum Ochraceum Laccase
Obtained By Multi- Crystals Composite Data Collection
Technique (20% Dose)
pdb|3T6X|C Chain C, Crystal Structure Of Steccherinum Ochraceum Laccase
Obtained By Multi- Crystals Composite Data Collection
Technique (20% Dose)
pdb|3T6Z|A Chain A, Crystal Structure Of Steccherinum Ochraceum Laccase
Obtained By Multi- Crystals Composite Data Collection
Technique (60% Dose)
pdb|3T6Z|B Chain B, Crystal Structure Of Steccherinum Ochraceum Laccase
Obtained By Multi- Crystals Composite Data Collection
Technique (60% Dose)
pdb|3T6Z|C Chain C, Crystal Structure Of Steccherinum Ochraceum Laccase
Obtained By Multi- Crystals Composite Data Collection
Technique (60% Dose)
pdb|3T71|A Chain A, Crystal Structure Of Steccherinum Ochraceum Laccase
Obtained By Multi- Crystals Composite Data Collection
Technique (90% Dose)
pdb|3T71|B Chain B, Crystal Structure Of Steccherinum Ochraceum Laccase
Obtained By Multi- Crystals Composite Data Collection
Technique (90% Dose)
pdb|3T71|C Chain C, Crystal Structure Of Steccherinum Ochraceum Laccase
Obtained By Multi- Crystals Composite Data Collection
Technique (90% Dose)
Length = 495
Score = 76.6 bits (187), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 59/205 (28%), Positives = 91/205 (44%), Gaps = 17/205 (8%)
Query: 34 ITLNGVQQRRNSWQDG-VYGTNCPIPPGKNFTYVLQVKDQIGSYFYFPSLAFHXXXXXXX 92
I +G Q+ +W DG + T CPI G +F+Y V G+Y+Y H
Sbjct: 64 IHWHGEFQKGTNWADGPAFITQCPIIVGNSFSYNFNVPGMAGTYWY------HSHLTTQY 117
Query: 93 XXXXXSRPLIPVPFDPPAG------DFTILA-GDWYKKNHTDLKAILDSGSDLPFPDGLV 145
++ P DP A D TI+ DWY ++ A +D DGL
Sbjct: 118 CDGLRGPFVVYDPNDPDANLYDVDDDTTIITLADWYHVLAKEMGAGGAITADSTLIDGLG 177
Query: 146 ---INGRGSNANTFTVDQGKTYRFRISNVGISTSINFRIQGHKMLLVEVEGTHTLQNTYD 202
+N + TV+ GK YR R+ ++ + +F I GH M ++E +G + + T D
Sbjct: 178 RTHVNVAAVPLSVITVEVGKRYRMRLVSISCDPNYDFSIDGHDMTIIETDGVDSQELTVD 237
Query: 203 SLDIHLGQSYSVLVRADQPPQGYYI 227
+ I Q YS ++ A+QP Y+I
Sbjct: 238 EIQIFAAQRYSFVLNANQPVGNYWI 262
>pdb|1GYC|A Chain A, Crystal Structure Determination At Room Temperature Of A
Laccase From Trametes Versicolor In Its Oxidised Form
Containing A Full Complement Of Copper Ions
Length = 499
Score = 75.9 bits (185), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 63/216 (29%), Positives = 93/216 (43%), Gaps = 29/216 (13%)
Query: 34 ITLNGVQQRRNSWQDG-VYGTNCPIPPGKNFTYVLQVKDQIGSYFYFPSLAFHXXXXXXX 92
I +G Q +W DG + CPI G +F Y V DQ G+++Y H
Sbjct: 63 IHWHGFFQAGTNWADGPAFVNQCPIASGHSFLYDFHVPDQAGTFWY------HSHLSTQY 116
Query: 93 XXXXXSRPLIPVPFDPPAGDF-------TILAGDWYKKNHTDLKAILDSGSDLPF-PDGL 144
++ P DP A + I DWY HT + G P D
Sbjct: 117 CDGLRGPFVVYDPKDPHASRYDVDNESTVITLTDWY---HTAARL----GPRFPLGADAT 169
Query: 145 VINGRGSNANTFT-------VDQGKTYRFRISNVGISTSINFRIQGHKMLLVEVEGTHTL 197
+ING G +A+T T V GK YRFR+ ++ + F I GH + ++EV+G ++
Sbjct: 170 LINGLGRSASTPTAALAVINVQHGKRYRFRLVSISCDPNYTFSIDGHNLTVIEVDGINSQ 229
Query: 198 QNTYDSLDIHLGQSYSVLVRADQPPQGYYIVISTRF 233
DS+ I Q YS ++ A+Q Y+I + F
Sbjct: 230 PLLVDSIQIFAAQRYSFVLNANQTVGNYWIRANPNF 265
>pdb|2QT6|A Chain A, Crystal Structure Determination Of A Blue Laccase From
Lentinus Tigrinus
pdb|2QT6|B Chain B, Crystal Structure Determination Of A Blue Laccase From
Lentinus Tigrinus
Length = 498
Score = 74.3 bits (181), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 67/253 (26%), Positives = 101/253 (39%), Gaps = 54/253 (21%)
Query: 23 VVLNFIYMAPLITLN---------------------------GVQQRRNSWQDG-VYGTN 54
+V+N ++ APLIT N G Q+ +W DG +
Sbjct: 25 IVVNNVFPAPLITGNMGDNFQLNLVNQMTNHTMLKTTSIHWHGFFQKGTNWADGPAFINQ 84
Query: 55 CPIPPGKNFTYVLQVKDQIGSYFYFPSLAFHXXXXXXXXXXXXSRPLIPVPFDPPAGDF- 113
CPI G +F Y QV Q G+++Y H ++ P DP A +
Sbjct: 85 CPIASGNSFLYDFQVPGQAGTFWY------HSHLSTQYCDGLRGPFVVYDPNDPHANLYD 138
Query: 114 ------TILAGDWYKKNHTDLKAILDSGSDLPFPDGLVINGRGSNANTFTVD-------Q 160
I DWY L G+D +ING G + +T T D +
Sbjct: 139 VDDESTVITLADWYHV-AAKLGPRFPKGAD-----STLINGLGRSTSTPTADLAVISVTK 192
Query: 161 GKTYRFRISNVGISTSINFRIQGHKMLLVEVEGTHTLQNTYDSLDIHLGQSYSVLVRADQ 220
GK YRFR+ ++ + F I H++ ++E +G T T DS+ I Q YS ++ A+Q
Sbjct: 193 GKRYRFRLVSLSCDPNYTFSIDSHQLTVIEADGVSTQPVTVDSIQIFAAQRYSFVLNANQ 252
Query: 221 PPQGYYIVISTRF 233
Y+I + F
Sbjct: 253 DVDNYWIRANPNF 265
>pdb|2H5U|A Chain A, Crystal Structure Of Laccase From Cerrena Maxima At 1.9a
Resolution
Length = 499
Score = 72.8 bits (177), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 60/212 (28%), Positives = 90/212 (42%), Gaps = 29/212 (13%)
Query: 38 GVQQRRNSWQDG-VYGTNCPIPPGKNFTYVLQVKDQIGSYFYFPSLAFHXXXXXXXXXXX 96
G Q+ +W DG + CPI PG +F Y QV +Q G+++Y H
Sbjct: 67 GFFQQGTNWADGPAFINQCPISPGHSFLYDFQVPNQAGTFWY------HSHLSTQYCDGL 120
Query: 97 XSRPLIPVPFDPPAG-------DFTILAGDWYKKNHTDLKAILDSGSDLP-FPDGLVING 148
++ P DP A D TI DWY HT K G P D +ING
Sbjct: 121 RGPFVVYDPNDPHASRYDVDNDDTTITLADWY---HTAAKL----GPAFPNGADSTLING 173
Query: 149 RG-------SNANTFTVDQGKTYRFRISNVGISTSINFRIQGHKMLLVEVEGTHTLQNTY 201
+G + + +V +GK RFR+ ++ + F I GH ++E + ++
Sbjct: 174 KGRAPSDSSAQLSVVSVTKGKRXRFRLVSLSCDPNFTFSIDGHNNTIIETDSVNSQPLNT 233
Query: 202 DSLDIHLGQSYSVLVRADQPPQGYYIVISTRF 233
DS+ I Q YS + A+Q Y+I + F
Sbjct: 234 DSIQIFAAQRYSFTLNANQAVDNYWIRANPNF 265
>pdb|1V10|A Chain A, Structure Of Rigidoporus Lignosus Laccase From
Hemihedrally Twinned Crystals
Length = 521
Score = 72.8 bits (177), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 104/404 (25%), Positives = 157/404 (38%), Gaps = 57/404 (14%)
Query: 38 GVQQRRNSWQDG-VYGTNCPIPPGKNFTYVLQVKDQIGSYFYFPSLA--FHXXXXXXXXX 94
G Q + DG + CPI P ++F Y V Q G+Y+Y L+ +
Sbjct: 88 GFFQAGTTEMDGPAFVNQCPIIPNESFVYDFVVPGQAGTYWYHSHLSTQYCDGLRGAFVV 147
Query: 95 XXXSRPLIPVPFDPPAGDFTILAGDWYKKNHTDLKAILDSGSDLPFPDGLVINGRGSNAN 154
+ P + + +D I DWY T L + P PD +ING G N+
Sbjct: 148 YDPNDPHLSL-YDVDDASTVITIADWYHSLSTVL--FPNPNKAPPAPDTTLINGLGRNSA 204
Query: 155 --------TFTVDQGKTYRFRISNVGISTSINFRIQGHKMLLVEVEGTHTLQNTYDSLDI 206
+V GK YRFRI + + F I GH+M ++EV+G T DSL I
Sbjct: 205 NPSAGQLAVVSVQSGKRYRFRIVSTSCFPNYAFSIDGHRMTVIEVDGVSHQPLTVDSLTI 264
Query: 207 HLGQSYSVLVRADQPPQGYYIVISTR-----FTSQVLSATSVLHYXXXXXXXXXXXXXXX 261
GQ YSV+V A+Q Y+I + FT + SA + Y
Sbjct: 265 FAGQRYSVVVEANQAVGNYWIRANPSNGRNGFTGGINSA--IFRYQGAAVAEPTTSQNSG 322
Query: 262 TTQIDWSLEQARSLRRNLTASGPRPNPQGSYHYGLINTTHTIRLQNTAPTINGKQRYAVN 321
T +L +A + + P P G+ + +R+ A T + + +N
Sbjct: 323 T-----ALNEANLIPLINPGAPGNPVPGGA------DINLNLRIGRNATTAD----FTIN 367
Query: 322 SVSFIPADTPLKLADYFKIPGVFSVGSIPDNPTGGGAYLQTSVMAADFRGFAEVVFENPE 381
FIP P+ L + S + P++ GGA V++ E+ P
Sbjct: 368 GAPFIPPTVPVLLQ-------ILSGVTNPNDLLPGGA-----VISLPANQVIEISI--PG 413
Query: 382 DTLQSWHIDGHNFFAVGMDGGEWTPASRLTYNLRDTISRCTVQV 425
+H+ GHNF V TP S + YN + + R V +
Sbjct: 414 GGNHPFHLHGHNFDVV------RTPGSSV-YNYVNPVRRDVVSI 450
>pdb|1ZPU|A Chain A, Crystal Structure Of Fet3p, A Multicopper Oxidase That
Functions In Iron Import
pdb|1ZPU|B Chain B, Crystal Structure Of Fet3p, A Multicopper Oxidase That
Functions In Iron Import
pdb|1ZPU|C Chain C, Crystal Structure Of Fet3p, A Multicopper Oxidase That
Functions In Iron Import
pdb|1ZPU|D Chain D, Crystal Structure Of Fet3p, A Multicopper Oxidase That
Functions In Iron Import
pdb|1ZPU|E Chain E, Crystal Structure Of Fet3p, A Multicopper Oxidase That
Functions In Iron Import
pdb|1ZPU|F Chain F, Crystal Structure Of Fet3p, A Multicopper Oxidase That
Functions In Iron Import
Length = 534
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 96/437 (21%), Positives = 154/437 (35%), Gaps = 67/437 (15%)
Query: 36 LNGVQQRRNSWQDGV-YGTNCPIPPGKNFTYVLQVKDQIGSYFYFPSLAFHXXXXXXXXX 94
+G+ Q + DGV + T CPI PG Y V +G+Y+Y
Sbjct: 61 FHGLFQNGTASMDGVPFLTQCPIAPGSTMLYNFTVDYNVGTYWYHSHTDGQYEDGMKGLF 120
Query: 95 XXXSRPLIPVPFDPPAGDFTILAGDWYKKNHTDLK----AILDSGSDLPFPDGLVINGRG 150
P +D + ++ +WY TDL ++ + P P L++N
Sbjct: 121 IIKDDSF-PYDYDE---ELSLSLSEWYHDLVTDLTKSFMSVYNPTGAEPIPQNLIVNNTM 176
Query: 151 SNANTFTVDQGKTYRFRISNVGISTSINFRIQGHKMLLVEVEGTHTLQNTYDSLDIHLGQ 210
+ T+ V TY RI NVG S F I+ H+M +VE++G T +N D L I + Q
Sbjct: 177 NL--TWEVQPDTTYLLRIVNVGGFVSQYFWIEDHEMTVVEIDGITTEKNVTDMLYITVAQ 234
Query: 211 SYSVLVRADQPPQGYYIVISTRFTSQVLSATSVLHYXXXXXXXXXXXXXXXTTQIDWSLE 270
Y+VLV + ++ +F +L D L
Sbjct: 235 RYTVLVHTKNDTDKNFAIMQ-KFDDTMLDVIPS----------------------DLQLN 271
Query: 271 QARSLRRNLTASGPRPNPQGS------------YHYGLI--NTTHTIRLQNTAPTINGKQ 316
+ N TA+ P N S Y I H I + +
Sbjct: 272 ATSYMVYNKTAALPTQNYVDSIDNFLDDFYLQPYEKEAIYGEPDHVITVDVVMDNLKNGV 331
Query: 317 RYA-VNSVSFIPADTPLKLADYFKIPGVFSVGSIPDNPTGGGAYLQTSVMAADFRGFAEV 375
YA N++++ P + V S G +N G+ T ++ D E+
Sbjct: 332 NYAFFNNITYTAPKVPTLMT-------VLSSGDQANNSEIYGSNTHTFILEKD--EIVEI 382
Query: 376 VFENPEDTLQSWHIDGHNFFAVGMDGGEWTPASRLTYNLRDT---------ISRCTVQVY 426
V N + +H+ GH F + D + ++ + R T+ V
Sbjct: 383 VLNNQDTGTHPFHLHGHAFQTIQRDRTYDDALGEVPHSFDPDNHPAFPEYPMRRDTLYVR 442
Query: 427 PKSWTAVYVPLDNVGMW 443
P+S + DN G+W
Sbjct: 443 PQSNFVIRFKADNPGVW 459
>pdb|3DKH|A Chain A, L559a Mutant Of Melanocarpus Albomyces Laccase
pdb|3DKH|B Chain B, L559a Mutant Of Melanocarpus Albomyces Laccase
Length = 559
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 58/217 (26%), Positives = 91/217 (41%), Gaps = 15/217 (6%)
Query: 23 VVLNFIYMAPLITLNGVQQRRNSWQDGVYG-TNCPIPP-GKNFTYVLQVKDQIGSYFYFP 80
V+ N + I +G+ Q+ + DG G T CPIPP G TY + + Q G+ +Y
Sbjct: 81 VINNLVTNGTSIHWHGIHQKDTNLHDGANGVTECPIPPKGGQRTYRWRAR-QYGTSWYHS 139
Query: 81 SLAFHXXXXXXXXXXXXSRPLIPVPFDPPAGDFTILAGDWYKKNHTDLKAILDSGSDLPF 140
+ +P +D G F I D+Y + DL + + PF
Sbjct: 140 HFSAQYGNGVVGTIQINGPASLP--YDIDLGVFPIT--DYYYRAADDLVHFTQNNAP-PF 194
Query: 141 PDGLVINGRGSNANT-------FTVDQGKTYRFRISNVGISTSINFRIQGHKMLLVEVEG 193
D ++ING N NT T+ GK +R RI N + H M ++ +
Sbjct: 195 SDNVLINGTAVNPNTGEGQYANVTLTPGKRHRLRILNTSTENHFQVSLVNHTMTVIAADM 254
Query: 194 THTLQNTYDSLDIHLGQSYSVLVRADQPPQGYYIVIS 230
T DSL + +GQ Y V++ A + P Y+ ++
Sbjct: 255 VPVNAMTVDSLFLAVGQRYDVVIDASRAPDNYWFNVT 291
>pdb|1GW0|A Chain A, Crystal Structure Of Laccase From Melanocarpus Albomyces
In Four Copper Form
pdb|1GW0|B Chain B, Crystal Structure Of Laccase From Melanocarpus Albomyces
In Four Copper Form
pdb|2IH8|A Chain A, A Low-dose Crystal Structure Of A Recombinant Melanocarpus
Albomyces Laccase
pdb|2IH8|B Chain B, A Low-dose Crystal Structure Of A Recombinant Melanocarpus
Albomyces Laccase
pdb|2IH9|A Chain A, A High-Dose Crystal Structure Of A Recombinant
Melanocarbus Albomyces Laccase
pdb|2IH9|B Chain B, A High-Dose Crystal Structure Of A Recombinant
Melanocarbus Albomyces Laccase
pdb|3FU7|B Chain B, Melanocarpus Albomyces Laccase Crystal Soaked (4 Sec) With
2,6- Dimethoxyphenol
pdb|3FU9|A Chain A, Melanocarpus Albomyces Laccase Crystal Soaked (20 Min)
With 2,6- Dimethoxyphenol
pdb|3FU9|B Chain B, Melanocarpus Albomyces Laccase Crystal Soaked (20 Min)
With 2,6- Dimethoxyphenol
pdb|3QPK|A Chain A, Probing Oxygen Channels In Melanocarpus Albomyces Laccase
pdb|3QPK|B Chain B, Probing Oxygen Channels In Melanocarpus Albomyces Laccase
Length = 559
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 58/217 (26%), Positives = 91/217 (41%), Gaps = 15/217 (6%)
Query: 23 VVLNFIYMAPLITLNGVQQRRNSWQDGVYG-TNCPIPP-GKNFTYVLQVKDQIGSYFYFP 80
V+ N + I +G+ Q+ + DG G T CPIPP G TY + + Q G+ +Y
Sbjct: 81 VINNLVTNGTSIHWHGIHQKDTNLHDGANGVTECPIPPKGGQRTYRWRAR-QYGTSWYHS 139
Query: 81 SLAFHXXXXXXXXXXXXSRPLIPVPFDPPAGDFTILAGDWYKKNHTDLKAILDSGSDLPF 140
+ +P+D G F I D+Y + DL + + PF
Sbjct: 140 HFSAQYGNGVVGTIQINGP--ASLPYDIDLGVFPIT--DYYYRAADDLVHFTQNNAP-PF 194
Query: 141 PDGLVINGRGSNANT-------FTVDQGKTYRFRISNVGISTSINFRIQGHKMLLVEVEG 193
D ++ING N NT T+ GK +R RI N + H M ++ +
Sbjct: 195 SDNVLINGTAVNPNTGEGQYANVTLTPGKRHRLRILNTSTENHFQVSLVNHTMTVIAADM 254
Query: 194 THTLQNTYDSLDIHLGQSYSVLVRADQPPQGYYIVIS 230
T DSL + +GQ Y V++ A + P Y+ ++
Sbjct: 255 VPVNAMTVDSLFLAVGQRYDVVIDASRAPDNYWFNVT 291
>pdb|2Q9O|A Chain A, Near-Atomic Resolution Structure Of A Melanocarpus
Albomyces Laccase
pdb|2Q9O|B Chain B, Near-Atomic Resolution Structure Of A Melanocarpus
Albomyces Laccase
pdb|3FU7|A Chain A, Melanocarpus Albomyces Laccase Crystal Soaked (4 Sec) With
2,6- Dimethoxyphenol
pdb|3FU8|A Chain A, Melanocarpus Albomyces Laccase Crystal Soaked (10 Sec)
With 2,6- Dimethoxyphenol
pdb|3FU8|B Chain B, Melanocarpus Albomyces Laccase Crystal Soaked (10 Sec)
With 2,6- Dimethoxyphenol
Length = 559
Score = 66.6 bits (161), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 58/217 (26%), Positives = 91/217 (41%), Gaps = 15/217 (6%)
Query: 23 VVLNFIYMAPLITLNGVQQRRNSWQDGVYG-TNCPIPP-GKNFTYVLQVKDQIGSYFYFP 80
V+ N + I +G+ Q+ + DG G T CPIPP G TY + + Q G+ +Y
Sbjct: 81 VINNLVTNGTSIHWHGIXQKDTNLHDGANGVTECPIPPKGGQRTYRWRAR-QYGTSWYHS 139
Query: 81 SLAFHXXXXXXXXXXXXSRPLIPVPFDPPAGDFTILAGDWYKKNHTDLKAILDSGSDLPF 140
+ +P+D G F I D+Y + DL + + PF
Sbjct: 140 HFSAQYGNGVVGTIQINGP--ASLPYDIDLGVFPIT--DYYYRAADDLVHFTQNNAP-PF 194
Query: 141 PDGLVINGRGSNANT-------FTVDQGKTYRFRISNVGISTSINFRIQGHKMLLVEVEG 193
D ++ING N NT T+ GK +R RI N + H M ++ +
Sbjct: 195 SDNVLINGTAVNPNTGEGQYANVTLTPGKRHRLRILNTSTENHFQVSLVNHTMTVIAADM 254
Query: 194 THTLQNTYDSLDIHLGQSYSVLVRADQPPQGYYIVIS 230
T DSL + +GQ Y V++ A + P Y+ ++
Sbjct: 255 VPVNAMTVDSLFLAVGQRYDVVIDASRAPDNYWFNVT 291
>pdb|3SQR|A Chain A, Crystal Structure Of Laccase From Botrytis Aclada At 1.67
A Resolution
Length = 580
Score = 62.0 bits (149), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 69/261 (26%), Positives = 101/261 (38%), Gaps = 41/261 (15%)
Query: 11 GCSLITHLYTHLVVLNFIYMAPLITLNGVQQRRNSWQDGVYG-TNCPIPPGKNFTYVLQV 69
G +LI H V N + I +G++Q + DGV G T CPI PG TY QV
Sbjct: 105 GDNLIIH-----VTNNLEHNGTSIHWHGIRQLGSLEYDGVPGVTQCPIAPGDTLTYKFQV 159
Query: 70 KDQIGSYFYFPSLAFHXXXXXXXXXXXXSRPLI---PVPFDPPAGDFTILAGDWYKKNHT 126
Q G+ +Y + PLI P D I DW H
Sbjct: 160 T-QYGTTWYHSHFSLQYGDGLFG-------PLIINGPATADYDEDVGVIFLQDWA---HE 208
Query: 127 DLKAILDSG--SDLPFPDGLVINGR---------------GSNANTFTVDQGKTYRFRIS 169
+ I D+ P + ++NG G T +G YR R+
Sbjct: 209 SVFEIWDTARLGAPPALENTLMNGTNTFDCSASTDPNCVGGGKKFELTFVEGTKYRLRLI 268
Query: 170 NVGISTSINFRIQGHKMLLVEVEGTHTLQNTYDSLDIHLGQSYSVLVRADQPPQGYYIV- 228
NVGI + F I H + ++ + + T D+L I +GQ Y V+V A+ Y+I
Sbjct: 269 NVGIDSHFEFAIDNHTLTVIANDLVPIVPYTTDTLLIGIGQRYDVIVEANAAADNYWIRG 328
Query: 229 ---ISTRFTSQVLSATSVLHY 246
+ ++ +AT +L Y
Sbjct: 329 NWGTTCSTNNEAANATGILRY 349
>pdb|3V9E|A Chain A, Structure Of The L513m Mutant Of The Laccase From B.aclada
Length = 580
Score = 62.0 bits (149), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 69/261 (26%), Positives = 101/261 (38%), Gaps = 41/261 (15%)
Query: 11 GCSLITHLYTHLVVLNFIYMAPLITLNGVQQRRNSWQDGVYG-TNCPIPPGKNFTYVLQV 69
G +LI H V N + I +G++Q + DGV G T CPI PG TY QV
Sbjct: 105 GDNLIIH-----VTNNLEHNGTSIHWHGIRQLGSLEYDGVPGVTQCPIAPGDTLTYKFQV 159
Query: 70 KDQIGSYFYFPSLAFHXXXXXXXXXXXXSRPLI---PVPFDPPAGDFTILAGDWYKKNHT 126
Q G+ +Y + PLI P D I DW H
Sbjct: 160 T-QYGTTWYHSHFSLQYGDGLFG-------PLIINGPATADYDEDVGVIFLQDWA---HE 208
Query: 127 DLKAILDSG--SDLPFPDGLVINGR---------------GSNANTFTVDQGKTYRFRIS 169
+ I D+ P + ++NG G T +G YR R+
Sbjct: 209 SVFEIWDTARLGAPPALENTLMNGTNTFDCSASTDPNCVGGGKKFELTFVEGTKYRLRLI 268
Query: 170 NVGISTSINFRIQGHKMLLVEVEGTHTLQNTYDSLDIHLGQSYSVLVRADQPPQGYYIV- 228
NVGI + F I H + ++ + + T D+L I +GQ Y V+V A+ Y+I
Sbjct: 269 NVGIDSHFEFAIDNHTLTVIANDLVPIVPYTTDTLLIGIGQRYDVIVEANAAADNYWIRG 328
Query: 229 ---ISTRFTSQVLSATSVLHY 246
+ ++ +AT +L Y
Sbjct: 329 NWGTTCSTNNEAANATGILRY 349
>pdb|2HZH|A Chain A, Crystal Structure Of Laccase From Coriolus Zonatus At 2.6
A Resolution
Length = 499
Score = 59.7 bits (143), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 52/205 (25%), Positives = 84/205 (40%), Gaps = 27/205 (13%)
Query: 38 GVQQRRNSWQDG-VYGTNCPIPPGKNFTYVLQVKDQIGSYFYFPSLAFHXXXXXXXXXXX 96
G Q+ +W DG + CPI G +F Y Q G+++Y H
Sbjct: 67 GFFQKGTNWADGPAFVNQCPIAAGSSFLYDFSTPIQAGTFWY------HSHLSTQYCDGD 120
Query: 97 XSRPLIPVPFDPPAG-------DFTILAGDWYKKNHTDLKAILDSGSDLPFPDGLVINGR 149
++ P DP A + I DWY HT A + + D +ING+
Sbjct: 121 RGPFVVYDPNDPSANLYDVDNLNTVITLTDWY---HT---AAQNGPAKPGGADATLINGQ 174
Query: 150 G-------SNANTFTVDQGKTYRFRISNVGISTSINFRIQGHKMLLVEVEGTHTLQNTYD 202
G ++ +V GK YRFR+ + + F I GH+M +++V+ +
Sbjct: 175 GRGPSSPSADLAVISVTAGKRYRFRLVSNSCDPNYTFSIDGHQMTIIQVDSINVQPLVVL 234
Query: 203 SLDIHLGQSYSVLVRADQPPQGYYI 227
+ I+ Q YS ++ A+Q Y+I
Sbjct: 235 KIQIYAAQRYSFILNANQAVNNYWI 259
>pdb|3PPS|A Chain A, Crystal Structure Of An Ascomycete Fungal Laccase From
Thielavia Arenaria
pdb|3PPS|B Chain B, Crystal Structure Of An Ascomycete Fungal Laccase From
Thielavia Arenaria
pdb|3PPS|C Chain C, Crystal Structure Of An Ascomycete Fungal Laccase From
Thielavia Arenaria
pdb|3PPS|D Chain D, Crystal Structure Of An Ascomycete Fungal Laccase From
Thielavia Arenaria
Length = 604
Score = 53.1 bits (126), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 51/202 (25%), Positives = 82/202 (40%), Gaps = 15/202 (7%)
Query: 38 GVQQRRNSWQDGVYG-TNCPIPP-GKNFTYVLQVKDQIGSYFYFPSLAFHXXXXXXXXXX 95
G++Q N + DG G T CPIPP G TY + Q G+ +Y +
Sbjct: 137 GLRQLGNVFNDGANGVTECPIPPKGGRKTYKFRAT-QYGTSWYHSHFSAQYGNGVVGTIQ 195
Query: 96 XXSRPLIPVPFDPPAGDFTILAGDWYKKNHTDLKAILDSGSDLPFPDGLVINGRGSNANT 155
+P+D G F ++ D+Y ++ +L S P D ++ NG + T
Sbjct: 196 IDGP--ASLPYDIDLGVFPLM--DYYYRSADELVHFTQSNG-APPSDNVLFNGTARHPET 250
Query: 156 -------FTVDQGKTYRFRISNVGISTSINFRIQGHKMLLVEVEGTHTLQNTYDSLDIHL 208
T+ GK +R RI N + GH M ++ + T SL + +
Sbjct: 251 GAGQWYNVTLTPGKRHRLRIINTSTDNHFQVSLVGHNMTVIATDMVPVNAFTVSSLFLAV 310
Query: 209 GQSYSVLVRADQPPQGYYIVIS 230
GQ Y V + A+ P Y+ ++
Sbjct: 311 GQRYDVTIDANSPVGNYWFNVT 332
>pdb|1KBW|A Chain A, Crystal Structure Of The Soluble Domain Of Ania From
Neisseria Gonorrhoeae
pdb|1KBW|B Chain B, Crystal Structure Of The Soluble Domain Of Ania From
Neisseria Gonorrhoeae
pdb|1KBW|C Chain C, Crystal Structure Of The Soluble Domain Of Ania From
Neisseria Gonorrhoeae
pdb|1KBW|D Chain D, Crystal Structure Of The Soluble Domain Of Ania From
Neisseria Gonorrhoeae
pdb|1KBW|E Chain E, Crystal Structure Of The Soluble Domain Of Ania From
Neisseria Gonorrhoeae
pdb|1KBW|F Chain F, Crystal Structure Of The Soluble Domain Of Ania From
Neisseria Gonorrhoeae
pdb|1KBV|A Chain A, Nitrite-Soaked Crystal Structure Of The Soluble Domain Of
Ania From Neisseria Gonorrhoeae
pdb|1KBV|B Chain B, Nitrite-Soaked Crystal Structure Of The Soluble Domain Of
Ania From Neisseria Gonorrhoeae
pdb|1KBV|C Chain C, Nitrite-Soaked Crystal Structure Of The Soluble Domain Of
Ania From Neisseria Gonorrhoeae
pdb|1KBV|D Chain D, Nitrite-Soaked Crystal Structure Of The Soluble Domain Of
Ania From Neisseria Gonorrhoeae
pdb|1KBV|E Chain E, Nitrite-Soaked Crystal Structure Of The Soluble Domain Of
Ania From Neisseria Gonorrhoeae
pdb|1KBV|F Chain F, Nitrite-Soaked Crystal Structure Of The Soluble Domain Of
Ania From Neisseria Gonorrhoeae
Length = 327
Score = 32.7 bits (73), Expect = 0.48, Method: Compositional matrix adjust.
Identities = 29/116 (25%), Positives = 45/116 (38%), Gaps = 6/116 (5%)
Query: 112 DFTILAGDWYKKNHTDLKAILDSGSDLPF---PDGLVINGRG---SNANTFTVDQGKTYR 165
+F I+ GD+Y K + + D P+ +V NG + N G+T R
Sbjct: 166 EFYIVQGDFYTKGKKGAQGLQPFDMDKAVAEQPEYVVFNGHVGALTGDNALKAKAGETVR 225
Query: 166 FRISNVGISTSINFRIQGHKMLLVEVEGTHTLQNTYDSLDIHLGQSYSVLVRADQP 221
+ N G + +F + G V VEG + S + G S V + D P
Sbjct: 226 MYVGNGGPNLVSSFHVIGEIFDKVYVEGGKLINENVQSTIVPAGGSAIVEFKVDIP 281
>pdb|2ZOO|A Chain A, Crystal Structure Of Nitrite Reductase From
Pseudoalteromonas Haloplanktis Tac125
Length = 442
Score = 32.3 bits (72), Expect = 0.55, Method: Compositional matrix adjust.
Identities = 30/126 (23%), Positives = 54/126 (42%), Gaps = 12/126 (9%)
Query: 112 DFTILAGDWYKKNHT--------DLKAILDSGSDLPFPDGLVINGRGSNANTFTVDQGKT 163
++ ++ GD+Y K D+ +D +D +G V G ++ N+ T G+T
Sbjct: 156 EYYLVQGDFYTKGEFGEAGLQPFDMAKAIDEDADYVVFNGSV--GSTTDENSLTAKVGET 213
Query: 164 YRFRISNVGISTSINFRIQGHKMLLVEVEGTHTLQNTYDSLDIHLGQSYSVLVRADQPPQ 223
R I N G + +F + G V VEG + + I G + V + + P
Sbjct: 214 VRLYIGNGGPNLVSSFHVIGEIFDTVYVEGGSLKNHNVQTTLIPAGGAAIVEFKVEVP-- 271
Query: 224 GYYIVI 229
G +I++
Sbjct: 272 GTFILV 277
>pdb|3ZX1|A Chain A, Multicopper Oxidase From Campylobacter Jejuni: A
Metallo-Oxidase
Length = 481
Score = 32.3 bits (72), Expect = 0.68, Method: Compositional matrix adjust.
Identities = 21/67 (31%), Positives = 31/67 (46%), Gaps = 1/67 (1%)
Query: 165 RFRISNVGISTSINFRIQGHKMLLVEVEGTHTLQNTYDSLDIHLGQSYSVLVRADQPPQG 224
R RI N + +N RIQG K +LV +G + Y ++ L + V V D P G
Sbjct: 231 RIRIYNATAARYLNLRIQGAKFILVGTDGGLIEKTIYKE-ELFLSPASRVEVLIDAPKDG 289
Query: 225 YYIVIST 231
+ + S
Sbjct: 290 NFKLESA 296
Database: pdbaa
Posted date: Mar 3, 2013 10:34 PM
Number of letters in database: 14,973,337
Number of sequences in database: 62,578
Lambda K H
0.320 0.137 0.431
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 15,358,289
Number of Sequences: 62578
Number of extensions: 662848
Number of successful extensions: 1379
Number of sequences better than 100.0: 28
Number of HSP's better than 100.0 without gapping: 25
Number of HSP's successfully gapped in prelim test: 3
Number of HSP's that attempted gapping in prelim test: 1316
Number of HSP's gapped (non-prelim): 38
length of query: 491
length of database: 14,973,337
effective HSP length: 103
effective length of query: 388
effective length of database: 8,527,803
effective search space: 3308787564
effective search space used: 3308787564
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 53 (25.0 bits)