Query 011178
Match_columns 491
No_of_seqs 218 out of 1487
Neff 8.6
Searched_HMMs 29240
Date Mon Mar 25 22:24:45 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/011178.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/011178hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 1aoz_A Ascorbate oxidase; oxid 100.0 1.9E-95 6E-100 777.1 49.8 466 4-487 26-542 (552)
2 3sqr_A Laccase; multicopper ox 100.0 3.2E-91 1.1E-95 739.2 42.6 441 4-486 90-564 (580)
3 1zpu_A Iron transport multicop 100.0 8.7E-91 3E-95 736.1 44.7 447 4-486 26-503 (534)
4 3t6v_A Laccase; beta barrel, o 100.0 8.1E-90 2.8E-94 720.4 42.8 441 4-486 27-491 (495)
5 3pxl_A Laccase; 4-copper prote 100.0 1.8E-89 6.2E-94 717.8 44.1 441 4-487 26-492 (499)
6 1v10_A Laccase; multicopper bl 100.0 1E-89 3.6E-94 727.0 42.2 445 3-488 46-513 (521)
7 1hfu_A Laccase 1; oxidoreducta 100.0 3.4E-89 1.2E-93 720.7 39.7 440 3-488 26-492 (503)
8 2q9o_A Laccase-1; multicopper 100.0 7.7E-88 2.6E-92 717.9 41.8 449 3-487 58-544 (559)
9 2xu9_A Laccase; oxidoreductase 100.0 1.7E-81 5.9E-86 652.1 31.5 372 3-464 38-439 (439)
10 2uxt_A Protein SUFI, SUFI; oxi 100.0 3.6E-81 1.2E-85 650.6 28.5 378 3-467 41-443 (451)
11 3abg_A Bilirubin oxidase; clea 100.0 6E-80 2E-84 652.1 32.8 392 3-467 60-477 (534)
12 3aw5_A Multicopper oxidase; be 100.0 9.7E-80 3.3E-84 638.8 28.0 379 3-464 28-448 (448)
13 2wsd_A Spore coat protein A; o 100.0 1.3E-78 4.5E-83 641.5 32.1 403 3-467 49-512 (513)
14 3zx1_A Oxidoreductase, putativ 100.0 9.1E-78 3.1E-82 625.3 34.1 379 3-464 73-480 (481)
15 3gyr_A PHS, phenoxazinone synt 100.0 6.3E-77 2.2E-81 645.2 31.0 427 3-468 56-594 (612)
16 3od3_A Blue copper oxidase CUE 100.0 6.3E-76 2.1E-80 611.1 28.6 385 3-463 39-488 (488)
17 2g23_A PHS, phenoxazinone synt 100.0 4.7E-75 1.6E-79 619.2 33.8 414 3-467 56-593 (612)
18 2r7e_A Coagulation factor VIII 100.0 1E-53 3.4E-58 466.5 14.1 217 7-232 70-314 (742)
19 2j5w_A Ceruloplasmin, ferroxid 100.0 2.1E-51 7.2E-56 465.6 30.8 355 8-400 91-488 (1065)
20 3g5w_A Multicopper oxidase typ 100.0 1.2E-46 4.1E-51 373.5 21.9 241 3-250 25-278 (318)
21 3tas_A Small laccase, multi-co 100.0 1.9E-46 6.3E-51 371.8 21.6 219 4-469 34-275 (313)
22 3t9w_A Small laccase, multi-co 100.0 1E-46 3.6E-51 370.7 19.2 110 3-119 49-178 (299)
23 2dv6_A Nitrite reductase; elec 100.0 8.3E-46 2.9E-50 386.1 27.1 366 11-467 54-435 (447)
24 3kw8_A Laccase, putative coppe 100.0 6.4E-46 2.2E-50 361.6 22.6 220 3-469 27-269 (276)
25 2zwn_A Two-domain type laccase 100.0 2E-45 6.8E-50 368.6 23.5 241 3-250 26-279 (339)
26 2j5w_A Ceruloplasmin, ferroxid 100.0 7.7E-45 2.6E-49 412.0 19.5 366 17-467 639-1060(1065)
27 3cg8_A Laccase; oxidoreductase 100.0 1.2E-42 4.2E-47 348.0 23.9 217 5-468 70-309 (343)
28 1kbv_A ANIA, major outer membr 100.0 9.3E-43 3.2E-47 347.5 21.6 231 3-250 61-309 (327)
29 3gdc_A Multicopper oxidase; be 100.0 4E-41 1.4E-45 329.8 22.9 208 3-232 57-273 (288)
30 2zoo_A Probable nitrite reduct 100.0 1.2E-39 4.1E-44 338.9 21.1 231 3-250 51-299 (442)
31 1sdd_B Coagulation factor V; c 100.0 3.3E-39 1.1E-43 350.4 18.9 232 6-247 63-326 (647)
32 1oe1_A Dissimilatory copper-co 100.0 1.4E-38 4.8E-43 319.2 16.9 236 3-250 56-320 (336)
33 1mzy_A Copper-containing nitri 100.0 1.6E-37 5.5E-42 311.0 22.5 236 3-250 55-320 (333)
34 1sdd_A Coagulation factor V; c 100.0 2.5E-39 8.6E-44 319.8 7.8 204 8-231 56-284 (306)
35 2bw4_A Copper-containing nitri 100.0 6.7E-38 2.3E-42 314.7 15.2 236 3-250 62-326 (340)
36 2r7e_B Coagulation factor VIII 100.0 1.7E-37 6E-42 339.1 9.7 218 6-232 193-441 (770)
37 2dv6_A Nitrite reductase; elec 100.0 3.8E-34 1.3E-38 298.1 23.9 229 3-250 186-435 (447)
38 2r7e_A Coagulation factor VIII 100.0 1.1E-35 3.9E-40 324.3 7.9 214 6-232 446-696 (742)
39 3gdc_A Multicopper oxidase; be 100.0 1.5E-29 5.1E-34 247.7 17.0 228 141-465 54-288 (288)
40 2zwn_A Two-domain type laccase 100.0 9.5E-29 3.3E-33 247.5 16.0 245 141-466 23-278 (339)
41 3g5w_A Multicopper oxidase typ 100.0 1.7E-28 5.8E-33 243.1 15.3 246 142-466 23-277 (318)
42 1sdd_A Coagulation factor V; c 99.9 4.8E-25 1.6E-29 217.5 2.7 232 144-466 52-301 (306)
43 1sdd_B Coagulation factor V; c 99.9 9.2E-22 3.2E-26 213.4 16.0 242 153-465 68-327 (647)
44 2bw4_A Copper-containing nitri 99.9 4.6E-21 1.6E-25 192.1 19.2 258 141-467 59-326 (340)
45 1kbv_A ANIA, major outer membr 99.9 1.4E-20 4.7E-25 187.3 18.2 245 142-466 59-308 (327)
46 2r7e_B Coagulation factor VIII 99.8 3.3E-22 1.1E-26 218.6 4.5 240 153-464 198-455 (770)
47 1mzy_A Copper-containing nitri 99.8 2.5E-19 8.7E-24 178.9 20.5 260 141-466 52-319 (333)
48 2zoo_A Probable nitrite reduct 99.8 4E-18 1.4E-22 176.8 17.0 246 142-467 49-299 (442)
49 1oe1_A Dissimilatory copper-co 99.8 3.1E-17 1E-21 164.0 21.3 258 142-466 54-319 (336)
50 3cvb_A Plastocyanin; cupredoxi 99.5 7E-15 2.4E-19 121.1 3.2 87 8-98 15-105 (105)
51 2aan_A Auracyanin A; cupredoxi 99.2 1.1E-11 3.6E-16 107.4 6.6 93 364-463 36-138 (139)
52 3kw8_A Laccase, putative coppe 99.2 1.4E-11 4.7E-16 119.3 7.9 90 10-101 166-268 (276)
53 2cal_A Rusticyanin; iron respi 99.2 2E-11 7E-16 107.1 8.2 84 10-97 59-154 (154)
54 2xu9_A Laccase; oxidoreductase 99.2 4.4E-10 1.5E-14 116.0 19.6 191 19-232 196-425 (439)
55 3cvb_A Plastocyanin; cupredoxi 99.2 5E-11 1.7E-15 97.7 9.6 85 363-464 19-104 (105)
56 2uxt_A Protein SUFI, SUFI; oxi 99.2 2.3E-10 7.7E-15 118.5 15.3 196 19-232 201-426 (451)
57 1v10_A Laccase; multicopper bl 99.1 1.1E-09 3.7E-14 115.4 17.3 238 141-450 43-290 (521)
58 1aoz_A Ascorbate oxidase; oxid 99.1 1.5E-09 5.3E-14 115.1 17.7 253 141-451 22-284 (552)
59 1hfu_A Laccase 1; oxidoreducta 99.1 3.3E-09 1.1E-13 111.3 18.3 217 12-232 185-455 (503)
60 3pxl_A Laccase; 4-copper prote 99.1 6.5E-09 2.2E-13 108.5 19.7 231 142-449 23-263 (499)
61 3t6v_A Laccase; beta barrel, o 99.0 6.6E-09 2.2E-13 108.4 19.2 233 142-449 24-266 (495)
62 2ov0_A Amicyanin; beta-sandwic 99.0 5.8E-10 2E-14 91.4 7.8 71 11-97 32-105 (105)
63 3cg8_A Laccase; oxidoreductase 99.0 4.6E-10 1.6E-14 111.9 7.7 90 11-102 208-310 (343)
64 2gim_A Plastocyanin; beta shee 98.9 2.4E-09 8.3E-14 87.7 8.7 84 364-464 21-105 (106)
65 2gim_A Plastocyanin; beta shee 98.9 1.6E-09 5.4E-14 88.9 6.7 71 23-98 31-106 (106)
66 3sqr_A Laccase; multicopper ox 98.9 1.8E-08 6.3E-13 106.6 16.2 239 141-449 86-330 (580)
67 1iby_A Nitrosocyanin; RED copp 98.9 2.1E-09 7.2E-14 89.1 6.7 75 10-98 36-112 (112)
68 3tas_A Small laccase, multi-co 98.9 4.6E-09 1.6E-13 103.4 10.2 96 153-250 173-273 (313)
69 2q9o_A Laccase-1; multicopper 98.9 3.4E-08 1.2E-12 104.8 16.0 230 142-449 56-292 (559)
70 1qhq_A Protein (auracyanin); e 98.8 1.1E-08 3.7E-13 88.4 8.0 95 365-464 35-139 (140)
71 3zx1_A Oxidoreductase, putativ 98.8 2.6E-07 8.9E-12 95.8 19.7 206 12-232 222-466 (481)
72 1zpu_A Iron transport multicop 98.8 5.2E-08 1.8E-12 102.8 14.4 225 141-449 22-256 (534)
73 2aan_A Auracyanin A; cupredoxi 98.8 1.6E-08 5.6E-13 87.1 8.1 79 17-97 42-139 (139)
74 1pcs_A Plastocyanin; electron 98.7 3.4E-08 1.2E-12 79.6 8.5 77 364-463 20-97 (98)
75 2plt_A Plastocyanin; electron 98.7 5.6E-08 1.9E-12 78.3 8.9 80 363-463 18-97 (98)
76 1fwx_A Nitrous oxide reductase 98.7 2E-08 7E-13 105.5 7.9 85 6-100 507-594 (595)
77 3t9w_A Small laccase, multi-co 98.6 4.7E-08 1.6E-12 95.4 8.3 104 144-249 179-288 (299)
78 1bxv_A Plastocyanin; copper pr 98.6 8.2E-08 2.8E-12 76.1 8.0 71 364-463 20-90 (91)
79 3aw5_A Multicopper oxidase; be 98.6 1.3E-06 4.6E-11 90.0 17.4 194 12-231 180-433 (448)
80 1b3i_A PETE protein, protein ( 98.6 8.3E-08 2.8E-12 77.1 6.2 77 364-463 20-96 (97)
81 1iby_A Nitrosocyanin; RED copp 98.5 2.9E-07 1E-11 76.0 8.6 74 364-465 39-112 (112)
82 4hci_A Cupredoxin 1; structura 98.5 9.4E-08 3.2E-12 77.3 5.2 66 17-97 35-100 (100)
83 2plt_A Plastocyanin; electron 98.5 6.7E-08 2.3E-12 77.8 4.1 67 24-97 30-98 (98)
84 1qhq_A Protein (auracyanin); e 98.5 4.3E-07 1.5E-11 78.2 9.3 86 12-98 33-140 (140)
85 3abg_A Bilirubin oxidase; clea 98.5 3.3E-06 1.1E-10 88.9 17.0 205 18-232 219-460 (534)
86 1byp_A Protein (plastocyanin); 98.5 5.9E-07 2E-11 72.3 8.7 82 363-463 17-98 (99)
87 2wsd_A Spore coat protein A; o 98.4 1.8E-06 6.1E-11 90.7 14.6 235 141-445 46-315 (513)
88 1pcs_A Plastocyanin; electron 98.4 7.1E-08 2.4E-12 77.7 2.8 68 24-97 31-98 (98)
89 1bxv_A Plastocyanin; copper pr 98.4 2.9E-07 9.9E-12 72.9 6.0 66 17-97 26-91 (91)
90 4hci_A Cupredoxin 1; structura 98.4 8.7E-07 3E-11 71.5 8.6 72 364-464 29-100 (100)
91 1kdj_A Plastocyanin; electron 98.4 7E-07 2.4E-11 72.3 6.8 84 363-463 17-101 (102)
92 3erx_A Pseudoazurin; copper pr 98.3 7.9E-07 2.7E-11 74.5 7.2 38 57-99 58-95 (123)
93 1b3i_A PETE protein, protein ( 98.3 5.4E-07 1.8E-11 72.3 5.9 65 23-97 30-97 (97)
94 3od3_A Blue copper oxidase CUE 98.3 1.2E-06 4.2E-11 90.8 9.9 89 143-232 379-475 (488)
95 1kdj_A Plastocyanin; electron 98.3 8.8E-07 3E-11 71.7 6.8 37 56-97 66-102 (102)
96 2g23_A PHS, phenoxazinone synt 98.2 4.2E-06 1.4E-10 89.1 11.6 90 142-232 459-576 (612)
97 3tu6_A Pseudoazurin (blue copp 98.2 9.7E-07 3.3E-11 74.3 5.1 40 56-100 59-98 (127)
98 1plc_A Plastocyanin; electron 98.2 4.1E-06 1.4E-10 67.3 8.4 65 23-97 28-99 (99)
99 3ef4_A Pseudoazurin, blue copp 98.2 3.7E-06 1.3E-10 70.3 8.2 63 24-99 34-96 (124)
100 1plc_A Plastocyanin; electron 98.2 5.6E-06 1.9E-10 66.5 7.9 82 363-463 17-98 (99)
101 1byp_A Protein (plastocyanin); 98.1 1.2E-05 3.9E-10 64.6 9.4 66 22-97 27-99 (99)
102 3c75_A Amicyanin; copper prote 98.1 7E-06 2.4E-10 69.8 7.8 61 23-97 71-132 (132)
103 3gyr_A PHS, phenoxazinone synt 98.0 7.8E-05 2.7E-09 80.0 16.3 90 142-232 459-576 (612)
104 2ov0_A Amicyanin; beta-sandwic 98.0 1.4E-05 4.6E-10 65.1 7.5 71 364-463 34-104 (105)
105 2cal_A Rusticyanin; iron respi 97.9 2E-05 6.7E-10 68.8 7.7 86 364-463 62-153 (154)
106 1iuz_A Plastocyanin; electron 97.9 1E-05 3.5E-10 64.9 4.8 65 23-97 29-98 (98)
107 1cuo_A Protein (azurin ISO-2); 97.9 1.7E-05 5.7E-10 66.9 6.2 42 56-98 86-129 (129)
108 1fwx_A Nitrous oxide reductase 97.9 3.2E-05 1.1E-09 81.4 9.7 75 363-466 513-593 (595)
109 1id2_A Amicyanin; beta barrel, 97.9 2.6E-05 8.9E-10 63.5 6.8 35 56-97 72-106 (106)
110 1paz_A Pseudoazurin precursor; 97.9 3.7E-05 1.3E-09 64.3 7.9 38 57-99 58-95 (123)
111 1pmy_A Pseudoazurin; electron 97.9 3.5E-05 1.2E-09 64.4 7.5 38 57-99 58-95 (123)
112 3ay2_A Lipid modified azurin p 97.8 1.8E-05 6.1E-10 69.6 5.5 43 55-98 124-167 (167)
113 2ccw_A Azurin II, AZN-2; elect 97.6 8.7E-05 3E-09 62.5 6.5 42 56-98 86-129 (129)
114 2iaa_C Azurin; quinoprotein, t 97.6 0.00012 4E-09 61.6 7.0 42 56-98 85-128 (128)
115 2ux6_A Pseudoazurin; type-1 co 97.6 0.00014 4.6E-09 60.8 7.3 37 56-99 57-93 (122)
116 1nwp_A Azurin; electron transp 97.4 0.00066 2.2E-08 57.0 9.6 41 56-97 86-128 (128)
117 3ef4_A Pseudoazurin, blue copp 97.4 0.00026 8.8E-09 59.1 6.9 75 364-467 23-97 (124)
118 3sbq_A Nitrous-oxide reductase 97.4 0.00023 7.9E-09 73.6 7.4 73 17-99 565-638 (638)
119 3tu6_A Pseudoazurin (blue copp 97.3 0.00031 1.1E-08 58.9 6.2 74 364-466 24-97 (127)
120 1iuz_A Plastocyanin; electron 97.3 0.00093 3.2E-08 53.2 8.7 80 363-463 18-97 (98)
121 1id2_A Amicyanin; beta barrel, 97.3 0.00062 2.1E-08 55.2 7.5 71 364-463 35-105 (106)
122 3erx_A Pseudoazurin; copper pr 97.3 0.00073 2.5E-08 56.3 7.9 73 364-465 22-94 (123)
123 3c75_A Amicyanin; copper prote 97.2 0.00086 2.9E-08 56.7 7.2 71 364-463 61-131 (132)
124 1paz_A Pseudoazurin precursor; 96.6 0.0092 3.1E-07 49.6 8.6 73 364-465 22-94 (123)
125 1pmy_A Pseudoazurin; electron 96.4 0.0057 2E-07 50.8 6.5 37 425-465 58-94 (123)
126 3sbq_A Nitrous-oxide reductase 96.4 0.01 3.4E-07 61.5 9.5 75 363-464 558-636 (638)
127 3fsa_A Azurin; copper, cupredo 96.3 0.025 8.5E-07 46.8 9.4 38 56-97 86-125 (125)
128 3ay2_A Lipid modified azurin p 96.2 0.012 4.3E-07 51.4 7.6 90 365-464 60-166 (167)
129 1cuo_A Protein (azurin ISO-2); 95.9 0.05 1.7E-06 45.4 9.8 87 364-464 19-128 (129)
130 2cua_A Protein (CUA); CUA cent 95.9 0.016 5.4E-07 49.0 6.6 69 16-98 66-135 (135)
131 2cua_A Protein (CUA); CUA cent 95.8 0.034 1.2E-06 46.9 8.4 70 365-464 62-134 (135)
132 2ux6_A Pseudoazurin; type-1 co 95.6 0.028 9.7E-07 46.5 6.9 71 364-465 22-92 (122)
133 2iaa_C Azurin; quinoprotein, t 95.1 0.081 2.8E-06 44.1 8.3 91 364-464 18-127 (128)
134 3s8f_B Cytochrome C oxidase su 94.9 0.047 1.6E-06 47.7 6.6 41 57-98 127-168 (168)
135 2ccw_A Azurin II, AZN-2; elect 94.8 0.12 4.1E-06 43.1 8.5 91 364-464 19-128 (129)
136 3s8f_B Cytochrome C oxidase su 94.6 0.15 5E-06 44.6 8.8 73 365-465 95-168 (168)
137 1nwp_A Azurin; electron transp 94.1 0.24 8.3E-06 41.1 8.9 92 364-463 19-127 (128)
138 3fsa_A Azurin; copper, cupredo 92.6 0.63 2.2E-05 38.3 8.8 92 364-463 19-124 (125)
139 3isy_A Bsupi, intracellular pr 88.4 4.1 0.00014 33.2 10.0 72 160-232 16-102 (120)
140 3isy_A Bsupi, intracellular pr 78.8 5.8 0.0002 32.2 6.9 63 19-81 21-100 (120)
141 1cyx_A CYOA; electron transpor 73.7 5.9 0.0002 35.4 6.1 77 363-467 41-119 (205)
142 3hb3_B Cytochrome C oxidase su 69.8 8 0.00027 36.8 6.5 78 363-468 189-267 (298)
143 2f1e_A Protein APAG; APAG prot 66.6 4.7 0.00016 33.1 3.6 48 20-67 33-86 (127)
144 1xvs_A Protein APAG; MCSG APC2 64.2 4.8 0.00016 33.0 3.2 48 20-67 32-85 (126)
145 2gsm_B Cytochrome C oxidase su 63.8 13 0.00043 34.7 6.4 78 363-468 171-249 (262)
146 1xq4_A Protein APAG; all beta 62.6 6.3 0.00021 32.9 3.7 48 20-67 37-90 (139)
147 1cyx_A CYOA; electron transpor 62.2 23 0.00079 31.6 7.5 61 153-232 40-100 (205)
148 1yew_A Particulate methane mon 61.2 21 0.00072 34.5 7.5 82 10-95 262-378 (382)
149 3rfr_A PMOB; membrane, oxidore 60.6 31 0.0011 33.7 8.6 81 10-95 296-410 (419)
150 1tza_A APAG protein, SOR45; st 58.9 5.4 0.00019 33.1 2.7 56 20-75 32-95 (134)
151 2r39_A FIXG-related protein; s 54.5 31 0.0011 27.5 6.6 46 163-218 34-81 (118)
152 1v54_B Cytochrome C oxidase po 53.4 21 0.00072 32.4 5.9 78 363-468 140-218 (227)
153 2gsm_B Cytochrome C oxidase su 38.9 65 0.0022 29.8 6.9 59 154-231 171-229 (262)
154 1fft_B Ubiquinol oxidase; elec 38.0 25 0.00085 33.6 3.9 76 364-467 152-229 (315)
155 3hb3_B Cytochrome C oxidase su 36.3 75 0.0026 30.0 7.0 59 154-231 189-247 (298)
156 1x9u_A Umecyanin; cupredoxin, 35.3 38 0.0013 27.1 4.1 35 65-100 72-107 (116)
157 2kut_A Uncharacterized protein 34.9 1.8E+02 0.006 23.4 8.3 62 3-70 7-74 (122)
158 2r5o_A Putative ATP binding co 34.5 97 0.0033 26.8 7.1 85 143-232 53-146 (188)
159 2qjv_A Uncharacterized IOLB-li 32.9 2E+02 0.0069 26.6 9.1 62 165-231 50-111 (270)
160 1xwv_A DER F II; beta sheets, 29.4 32 0.0011 28.0 2.8 24 47-70 70-93 (129)
161 2p9r_A Alpha-2-M, alpha-2-macr 28.8 1.1E+02 0.0038 23.2 5.8 68 158-231 13-84 (102)
162 3idu_A Uncharacterized protein 28.4 2.3E+02 0.008 22.8 9.3 67 157-232 28-97 (127)
163 1nep_A EPV20, BNPC2, epididyma 26.2 39 0.0013 27.5 2.8 24 47-70 71-95 (130)
164 1v54_B Cytochrome C oxidase po 26.1 1.2E+02 0.0041 27.3 6.2 60 153-231 139-198 (227)
165 2x3c_A Toxic extracellular end 24.6 3E+02 0.01 26.3 9.2 31 201-231 92-127 (343)
166 1ws8_A Mavicyanin; oxidized fo 24.0 88 0.003 24.6 4.3 37 64-101 71-107 (109)
167 2wtp_A ORF131 protein, CZCE; m 23.5 21 0.00072 29.2 0.6 21 154-174 71-91 (131)
168 1oal_A Superoxide dismutase; o 23.3 44 0.0015 28.2 2.5 27 367-393 24-50 (151)
169 2aqm_A Superoxide dismutase [C 22.1 37 0.0013 28.7 1.9 26 368-393 28-53 (154)
170 1eqw_A Cu,Zn superoxide dismut 22.0 37 0.0013 28.8 1.8 26 368-393 28-53 (156)
171 3kmh_A D-lyxose isomerase; cup 21.9 2.5E+02 0.0086 25.4 7.3 28 187-214 157-184 (246)
172 1eso_A SOD, Cu, Zn superoxide 21.7 38 0.0013 28.7 1.8 26 368-393 28-53 (154)
173 1fft_B Ubiquinol oxidase; elec 21.0 94 0.0032 29.6 4.6 58 155-231 152-209 (315)
174 1x9u_A Umecyanin; cupredoxin, 20.3 91 0.0031 24.8 3.8 34 434-467 73-107 (116)
No 1
>1aoz_A Ascorbate oxidase; oxidoreductase(oxygen acceptor); HET: NAG; 1.90A {Cucurbita pepo var} SCOP: b.6.1.3 b.6.1.3 b.6.1.3 PDB: 1aso_A* 1asp_A* 1asq_A*
Probab=100.00 E-value=1.9e-95 Score=777.13 Aligned_cols=466 Identities=27% Similarity=0.481 Sum_probs=366.0
Q ss_pred CCcccCCCCeEEE--eeeEEEEEEecCC-CCCeeeecccCCCCCCCCCCCCC-CCCCCCCCCeEEEEEEeCCCccceeEe
Q 011178 4 MNHFSSLGCSLIT--HLYTHLVVLNFIY-MAPLITLNGVQQRRNSWQDGVYG-TNCPIPPGKNFTYVLQVKDQIGSYFYF 79 (491)
Q Consensus 4 ~~~~~~~G~~l~v--~d~v~i~~~N~l~-~~~siH~HG~~~~~~~~~DG~~~-~q~~i~PG~~~~Y~f~~~~~~Gt~wYH 79 (491)
-.++..+||+||+ ||+|+|+|+|+|+ ++|+|||||+++.+++|+||+++ |||+|+||++|+|+|++ +++||||||
T Consensus 26 ~~Ng~~PGP~I~~~~GD~v~v~v~N~l~~~~tsiHwHGl~~~~~~~~DGv~~vtq~~I~PG~s~tY~f~~-~~~GT~wYH 104 (552)
T 1aoz_A 26 GINGQFPGPTIRANAGDSVVVELTNKLHTEGVVIHWHGILQRGTPWADGTASISQCAINPGETFFYNFTV-DNPGTFFYH 104 (552)
T ss_dssp EETTBSSCCCEEEETTCEEEEEEEECCSSCCBCEEEETCCCTTCGGGSCCBTTTBCCBCTTCEEEEEEEC-CSCEEEEEE
T ss_pred EECCccCCCcEEEeCCCEEEEEEEeCCCCCCeeEEeCCCccCCCcccCCCcccccCCcCCCCeEEEEEEC-CCCEEEEEE
Confidence 3467778888887 4889999999998 99999999999999999999999 99999999999999999 799999999
Q ss_pred CCccccccCCceeEEEEecCCCCCCCCCCCCCcceEEeeecccCCHHHHHHHHhcC--CCCCCCceEEEcCcCCC-----
Q 011178 80 PSLAFHKAAGGYGGIKIASRPLIPVPFDPPAGDFTILAGDWYKKNHTDLKAILDSG--SDLPFPDGLVINGRGSN----- 152 (491)
Q Consensus 80 ~H~~~q~~~Gl~G~liV~~~~~~~~~~~~~~~e~~l~l~d~~~~~~~~~~~~~~~~--~~~~~~~~~~vNG~~~~----- 152 (491)
||.+.|+++||+|+|||++++....++ .+|+|++|+|+||++++..++...+... .....++.++|||+...
T Consensus 105 sH~~~q~~~Gl~G~liV~~~~~~~~~~-~~d~e~~l~l~Dw~~~~~~~~~~~~~~~~~~~~~~~~~~liNG~~~~~c~~~ 183 (552)
T 1aoz_A 105 GHLGMQRSAGLYGSLIVDPPQGKKEPF-HYDGEINLLLSDWWHQSIHKQEVGLSSKPIRWIGEPQTILLNGRGQFDCSIA 183 (552)
T ss_dssp ECSTTTGGGTCEEEEEEECCTTCCCSS-CCSEEEEEEEEEECSSCHHHHHHHTTSSSCCCCCSCSEEEETTBCCSSSBTT
T ss_pred ECchhHHhccCeeeEEEeCCcccCCCC-CCCccceEEeecccCCCHHHHHhhhhcccccCCCCCCeEEECCccccCcccC
Confidence 999999999999999999986544555 4578999999999999876654333321 12245789999999832
Q ss_pred -------------------cceEEEeCCCEEEEEEEEcCCCCeEeEEEeCceeEEEEecCccCCCCccCeEEEcCCceEE
Q 011178 153 -------------------ANTFTVDQGKTYRFRISNVGISTSINFRIQGHKMLLVEVEGTHTLQNTYDSLDIHLGQSYS 213 (491)
Q Consensus 153 -------------------~~~~~v~~g~~~rlR~iN~~~~~~~~~~i~~~~~~via~DG~~~~p~~~~~l~l~pGeR~d 213 (491)
.+.++|++|++|||||||+|..+.+.|+|+||+|+|||+||.+++|..+++|.|+||||||
T Consensus 184 ~~~~~~~~~c~~~~~~~~~~~~~~v~~G~~~RlRliNa~~~~~~~~~i~gh~~~vi~~DG~~~~P~~~~~l~i~pgqR~d 263 (552)
T 1aoz_A 184 AKYDSNLEPCKLKGSESCAPYIFHVSPKKTYRIRIASTTALAALNFAIGNHQLLVVEADGNYVQPFYTSDIDIYSGESYS 263 (552)
T ss_dssp GGGCTTSCBCCCCSCSTTSCCCEEECTTCEEEEEEEECCSSCEEEEEETTCCEEEEEETTEEEEEEEESCEEECTTCEEE
T ss_pred cccccccccccccCCCCCCceEEEEcCCCEEEEEEEcccccceEEEEEcCcEEEEEEECCcccCceEEeEEEEcCCcEEE
Confidence 0179999999999999999999999999999999999999999999999999999999999
Q ss_pred EEEEe-CCCCcceEEEEEeecc-CCCcceEEEEEecCCCCCC--CCCCCCCCC-ccccchhhhhhhhccCCCCCCCCCCC
Q 011178 214 VLVRA-DQPPQGYYIVISTRFT-SQVLSATSVLHYSNSAGSV--SGPPPGGPT-TQIDWSLEQARSLRRNLTASGPRPNP 288 (491)
Q Consensus 214 v~v~~-~~~~g~~~i~~~~~~~-~~~~~~~ail~y~~~~~~~--~~~~p~~p~-~~~~~~~~~~~~~~~~l~~~~~~~~p 288 (491)
|+|++ ++.+|+|||++....+ .......|+|+|.++.... ..+.|..|. .+.+.... ..+. .+....+.+.|
T Consensus 264 vlv~~~~~~~g~y~i~~~~~~~~~~~~~~~ail~y~~~~~~~~p~~~~p~~p~~~~~~~~~~--~~l~-~l~~~~~~~~~ 340 (552)
T 1aoz_A 264 VLITTDQNPSENYWVSVGTRARHPNTPPGLTLLNYLPNSVSKLPTSPPPQTPAWDDFDRSKN--FTYR-ITAAMGSPKPP 340 (552)
T ss_dssp EEEECCSCTTCCEEEEEEEESSCCCSCCEEEEEEETTSCTTSCCSSCCCCCCCTTCHHHHHH--HHTT-CCBCTTCCCCC
T ss_pred EEEEcCCCCCCCEEEEEEcccCCCCCccEEEEEEECCCCCCCCCCCCCCCCCcccccccccc--cccc-ccccCCCCCCC
Confidence 99999 5567999999987643 2345678999998765311 111222221 11110000 0010 11110011111
Q ss_pred CCCCCccccccceEEEEeccccCcCCeEeEEEcCeeeeCCCCccccccccCCCCccccCCCCC---------CC-CCCCc
Q 011178 289 QGSYHYGLINTTHTIRLQNTAPTINGKQRYAVNSVSFIPADTPLKLADYFKIPGVFSVGSIPD---------NP-TGGGA 358 (491)
Q Consensus 289 ~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~iNg~~f~~~~~p~~~~~~~~~~~~~~~~~~~~---------~p-~~~~~ 358 (491)
...++++.+.......++...|+|||++|..+..|+|.+.+.++++.|+.+.... .+ .....
T Consensus 341 --------~~~~~~~~l~~~~~~~~~~~~w~iNg~s~~~p~~P~L~~~~~~~~g~~~~~~p~~~~~~~~~~~~~~~~~~~ 412 (552)
T 1aoz_A 341 --------VKFNRRIFLLNTQNVINGYVKWAINDVSLALPPTPYLGAMKYNLLHAFDQNPPPEVFPEDYDIDTPPTNEKT 412 (552)
T ss_dssp --------SSCSEEEEEEEEEEEETTEEEEEETTEEECCCSSCHHHHHHTTCTTSSCCSCCCSCCCTTCCTTSCCCCTTC
T ss_pred --------CCCcEEEEEEEeeccCCCeEEEEECCCccCCCCCCHHHHHhhcCccccccCCCccccccccccccccccccc
Confidence 2356777766533223456789999999998899998877766666655332211 01 12244
Q ss_pred ceeeeEEeecCCcEEEEEEEcCCC------CCCceeccCCCeEEEeeccCCCCCCCCCCcccCCCCceeeEEeCCCCEEE
Q 011178 359 YLQTSVMAADFRGFAEVVFENPED------TLQSWHIDGHNFFAVGMDGGEWTPASRLTYNLRDTISRCTVQVYPKSWTA 432 (491)
Q Consensus 359 ~~~~~~~~~~~g~~v~~~i~N~~~------~~HP~HlHG~~F~Vl~~g~g~~~~~~~~~~~~~~p~~rDTv~v~p~~~~~ 432 (491)
+.++.++.++.|++|+|+|+|.+. +.||||||||+||||+++.|.|++.....+|+.+|.|||||.|++++|++
T Consensus 413 ~~~t~~~~~~~g~~v~ivi~N~~~~~~~~~~~HP~HLHGh~F~Vl~~g~G~~~~~~~~~~n~~~p~~RDTv~vpp~g~v~ 492 (552)
T 1aoz_A 413 RIGNGVYQFKIGEVVDVILQNANMMKENLSETHPWHLHGHDFWVLGYGDGKFSAEEESSLNLKNPPLRNTVVIFPYGWTA 492 (552)
T ss_dssp EEECCCEEECTTCEEEEEEEECCCSSTTCCCCEEEEETTCCEEEEEEEESSCCGGGGGGSCCSSCCEESEEEECTTEEEE
T ss_pred cccceEEEecCCCEEEEEEeCCcccccccCCCCCEEEcCCceEEEecccCccCcccccccccCCCCccCeEEeCCCceEE
Confidence 567788999999999999999874 45999999999999999989988744556889999999999999999999
Q ss_pred EEEEccCcceeeeeecchhhhhcceEEEEEEecCCccCccCCCCCCcchhccccc
Q 011178 433 VYVPLDNVGMWNIRSENWARQYLGQQFYLRVYSSANSWRDEYPIPSNALLCGRAV 487 (491)
Q Consensus 433 irf~adnpG~w~~HCHil~H~d~GMm~~~~V~~~~~~~~~~~~~p~~~~~c~~~~ 487 (491)
|||+|||||.|+|||||++|++.|||+.|.+... + .+++|+++++|+.++
T Consensus 493 Irf~aDNPG~W~~HCHi~~H~~~GM~~~~~~~~~-~----~~~~P~~~~~C~~~~ 542 (552)
T 1aoz_A 493 IRFVADNPGVWAFHCHIEPHLHMGMGVVFAEGVE-K----VGRIPTKALACGGTA 542 (552)
T ss_dssp EEEECCSCEEEEEEESSHHHHHTTCEEEEEECGG-G----CCCCCHHHHSSHHHH
T ss_pred EEEEcCCCeEEEEEeeehhHhhCCCeEEEEeCch-h----hccCCcchhhhhccC
Confidence 9999999999999999999999999999987543 3 366899999999875
No 2
>3sqr_A Laccase; multicopper oxidase, glycosylation, oxidoreductase; HET: NAG BMA MAN; 1.67A {Botrytis aclada}
Probab=100.00 E-value=3.2e-91 Score=739.15 Aligned_cols=441 Identities=22% Similarity=0.306 Sum_probs=343.9
Q ss_pred CCcccCCCCeEEE--eeeEEEEEEecCC-CCCeeeecccCCCCCCCCCCCCC-CCCCCCCCCeEEEEEEeCCCccceeEe
Q 011178 4 MNHFSSLGCSLIT--HLYTHLVVLNFIY-MAPLITLNGVQQRRNSWQDGVYG-TNCPIPPGKNFTYVLQVKDQIGSYFYF 79 (491)
Q Consensus 4 ~~~~~~~G~~l~v--~d~v~i~~~N~l~-~~~siH~HG~~~~~~~~~DG~~~-~q~~i~PG~~~~Y~f~~~~~~Gt~wYH 79 (491)
..++..|||+|++ ||+|+|+|+|+|+ ++|+|||||++|.+++||||+++ |||||+||++|+|+|++. |+||||||
T Consensus 90 ~~NG~~PGP~I~~~~GD~v~V~v~N~l~~~~tsIHwHGl~~~~t~~~DGvp~vTq~pI~PG~sftY~f~~~-q~GT~WYH 168 (580)
T 3sqr_A 90 TFNGTVPGPAIIADWGDNLIIHVTNNLEHNGTSIHWHGIRQLGSLEYDGVPGVTQCPIAPGDTLTYKFQVT-QYGTTWYH 168 (580)
T ss_dssp EETTBSSCCCEEEETTCEEEEEEEECCSSCCBCEEETTCCCTTCGGGSCCBTTTBCCBCTTCEEEEEEECC-CCEEEEEE
T ss_pred EECCccCCceEEEeCCCEEEEEEEECCCCCcceEEecccccCCCccccCCCccccCCCCCCCeEEEEEECC-CCcceEEe
Confidence 3467788899887 4889999999998 89999999999999999999999 999999999999999995 89999999
Q ss_pred CCccccccCCceeEEEEecCCCCCCCCCCCCCcc-eEEeeecccCCHHHHHHHHhcCCCCCCCceEEEcCcCCC------
Q 011178 80 PSLAFHKAAGGYGGIKIASRPLIPVPFDPPAGDF-TILAGDWYKKNHTDLKAILDSGSDLPFPDGLVINGRGSN------ 152 (491)
Q Consensus 80 ~H~~~q~~~Gl~G~liV~~~~~~~~~~~~~~~e~-~l~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~vNG~~~~------ 152 (491)
||.+.|+++||+|+|||++++. .+| |.|+ +|+|+||+++...++...+.. ...+.+++++|||+...
T Consensus 169 sH~~~q~~~GL~G~lIV~~p~~--~~y---D~d~~~l~l~Dw~~~~~~~~~~~~~~-~~~~~~d~~liNG~~~~~c~~~~ 242 (580)
T 3sqr_A 169 SHFSLQYGDGLFGPLIINGPAT--ADY---DEDVGVIFLQDWAHESVFEIWDTARL-GAPPALENTLMNGTNTFDCSAST 242 (580)
T ss_dssp ECSTTGGGGTCEEEEEEECCCS--SCC---SEEEEEEEEEEECSSCHHHHHHHHTT-SCCCCBSEEEETTBCCCCCTTCC
T ss_pred ecccccccCcCEEEEEeeCccc--CCC---CccceEEEEEEEecCCHHHHHHHHhc-cCCCCCceEEECCcccCCCcccc
Confidence 9999999999999999998753 234 7887 999999999988776544433 23678899999999741
Q ss_pred ---------cceEEEeCCCEEEEEEEEcCCCCeEeEEEeCceeEEEEecCccCCCCccCeEEEcCCceEEEEEEeCCCCc
Q 011178 153 ---------ANTFTVDQGKTYRFRISNVGISTSINFRIQGHKMLLVEVEGTHTLQNTYDSLDIHLGQSYSVLVRADQPPQ 223 (491)
Q Consensus 153 ---------~~~~~v~~g~~~rlR~iN~~~~~~~~~~i~~~~~~via~DG~~~~p~~~~~l~l~pGeR~dv~v~~~~~~g 223 (491)
.++++|++|++|||||||+|..+.+.|+|+||+|+|||+||.+++|..+++|.|+|||||||+|++++++|
T Consensus 243 ~~~~~~~~~~~~~~v~~G~~yRlRlINa~~~~~~~~~i~gh~~~VIa~DG~~v~P~~~~~l~i~pGqRydVlv~a~~~~g 322 (580)
T 3sqr_A 243 DPNCVGGGKKFELTFVEGTKYRLRLINVGIDSHFEFAIDNHTLTVIANDLVPIVPYTTDTLLIGIGQRYDVIVEANAAAD 322 (580)
T ss_dssp CTTBCCCCCCCEEECCTTCEEEEEEEECCSSCCEEEEETTCCEEEEEETTEEEEEEEESSEEECTTCEEEEEEECCSCSS
T ss_pred ccccccCCCceeEEEcCCCEEEEEEEeccCCceeeEEeCCceEEEEEeCCccCCceEeeEEEEccceEEEEEEEeCCCCC
Confidence 37999999999999999999999999999999999999999999999999999999999999999998889
Q ss_pred ceEEEEEeeccC----CCcceEEEEEecCCCCCCCCCCCCCCC-ccccchhhhhhhhccCCCCCCCCCCCCCCCCccccc
Q 011178 224 GYYIVISTRFTS----QVLSATSVLHYSNSAGSVSGPPPGGPT-TQIDWSLEQARSLRRNLTASGPRPNPQGSYHYGLIN 298 (491)
Q Consensus 224 ~~~i~~~~~~~~----~~~~~~ail~y~~~~~~~~~~~p~~p~-~~~~~~~~~~~~~~~~l~~~~~~~~p~~~~~~~~~~ 298 (491)
+|||++...... ......|||+|.++... .|..+. ...+..++ .....|.+..+.+.|. .
T Consensus 323 ~Y~i~a~~~~~~~~~~~~~~~~aiL~Y~~~~~~----~P~~~~~~~~~~~~~---~~~~~L~P~~~~~~~~--------~ 387 (580)
T 3sqr_A 323 NYWIRGNWGTTCSTNNEAANATGILRYDSSSIA----NPTSVGTTPRGTCED---EPVASLVPHLALDVGG--------Y 387 (580)
T ss_dssp EEEEECCCCTTTSCBTTGGGCEEEEESSTTCCC----CCCCCCCCCCCCSCC---SCGGGCCBSSCCBCCS--------E
T ss_pred eEEEEEecccccCccCCCCceEEEEEECCCCCC----CCCCCCCCccchhhc---ccccccccCCCCCCCC--------c
Confidence 999999875421 12367999999865421 111111 00000000 0001233332222221 1
Q ss_pred cceEEEEeccccCcCCeEeEEEcCeeee-CCCCccccccccCCCCccccCCCCCCCCCCCcceeeeEEeec----CCcEE
Q 011178 299 TTHTIRLQNTAPTINGKQRYAVNSVSFI-PADTPLKLADYFKIPGVFSVGSIPDNPTGGGAYLQTSVMAAD----FRGFA 373 (491)
Q Consensus 299 ~~~~~~l~~~~~~~~~~~~~~iNg~~f~-~~~~p~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~----~g~~v 373 (491)
.+.++.+... .++...|+|||.+|. ++..|.|.+.+.+ . ...|. ..+++.++ .|++|
T Consensus 388 ~~~~~~l~~~---~~~~~~w~iN~~s~~~~~~~P~L~~~~~g---~------~~~~~------~~~~~~~~~~~~~~~~V 449 (580)
T 3sqr_A 388 SLVDEQVSSA---FTNYFTWTINSSSLLLDWSSPTTLKIFNN---E------TIFPT------EYNVVALEQTNANEEWV 449 (580)
T ss_dssp EEEEEEEEEE---ESSSEEEEETTBCCCCCTTSCHHHHHHTT---C------CCCCG------GGCEEEECC----CCEE
T ss_pred cceEEEEEec---cCCceeEEECCEecccCCCCCchhhhhcC---C------ccCCC------CcceeecccccCCCcEE
Confidence 2333333321 245689999999997 5678887654321 0 11121 23444554 69999
Q ss_pred EEEEEcCC--CCCCceeccCCCeEEEeeccCCCCCCC-CCCcccCCCCceeeEEeCCCCEEEEEEEccCcceeeeeecch
Q 011178 374 EVVFENPE--DTLQSWHIDGHNFFAVGMDGGEWTPAS-RLTYNLRDTISRCTVQVYPKSWTAVYVPLDNVGMWNIRSENW 450 (491)
Q Consensus 374 ~~~i~N~~--~~~HP~HlHG~~F~Vl~~g~g~~~~~~-~~~~~~~~p~~rDTv~v~p~~~~~irf~adnpG~w~~HCHil 450 (491)
||+|+|.+ .+.||||||||+||||++|.|.|+++. ...+|+.||++|||+.|++++|++|||++||||.|+|||||+
T Consensus 450 eiVi~n~~~~~~~HP~HLHGh~F~vv~~g~G~f~~~~~~~~~nl~nP~~rDTv~v~~~g~~~irf~adNPG~W~~HCHi~ 529 (580)
T 3sqr_A 450 VYVIEDLTGFGIWHPIHLHGHDFFIVAQETDVFNSDESPAKFNLVNPPRRDVAALPGNGYLAIAFKLDNPGSWLLHCHIA 529 (580)
T ss_dssp EEEEEECSSSCCCEEEEESSCCEEEEEEESSCCCTTTSGGGCCCBSCCEESEEEECTTSEEEEEEESCSCEEEEEEECSH
T ss_pred EEEEeCCCccccceeeEecCceEEEEecCCCccCccccccccccCCCceeeEEEeCCCceEEEEEEcCCCeeeEEEECcH
Confidence 99999987 788999999999999999999998653 367899999999999999999999999999999999999999
Q ss_pred hhhhcceEEEEEEecCCccCccCCCCCCc-chhcccc
Q 011178 451 ARQYLGQQFYLRVYSSANSWRDEYPIPSN-ALLCGRA 486 (491)
Q Consensus 451 ~H~d~GMm~~~~V~~~~~~~~~~~~~p~~-~~~c~~~ 486 (491)
+|++.||++.|.+ .++++ ++..++|++ ...|..+
T Consensus 530 ~H~~~Gm~~~~~e-~~~~i-~~~~~~~~~~~~~C~~~ 564 (580)
T 3sqr_A 530 WHASEGLAMQFVE-SQSSI-AVKMTDTAIFEDTCANW 564 (580)
T ss_dssp HHHHTTCEEEEEE-SGGGC-CCCHHHHHHHHHHHHHH
T ss_pred HHhhCCCcEEEEE-CHHHH-hhccCCcHHHHHhhHHH
Confidence 9999999999976 44443 222236665 4588654
No 3
>1zpu_A Iron transport multicopper oxidase FET3; ferroxidase, oxidoreduc; HET: NAG BMA MAN NDG; 2.80A {Saccharomyces cerevisiae}
Probab=100.00 E-value=8.7e-91 Score=736.13 Aligned_cols=447 Identities=23% Similarity=0.308 Sum_probs=344.9
Q ss_pred CCcccCCCCeEEEe--eeEEEEEEecCC-CCCeeeecccCCCCCCCCCCCCC-CCCCCCCCCeEEEEEEeCCCccceeEe
Q 011178 4 MNHFSSLGCSLITH--LYTHLVVLNFIY-MAPLITLNGVQQRRNSWQDGVYG-TNCPIPPGKNFTYVLQVKDQIGSYFYF 79 (491)
Q Consensus 4 ~~~~~~~G~~l~v~--d~v~i~~~N~l~-~~~siH~HG~~~~~~~~~DG~~~-~q~~i~PG~~~~Y~f~~~~~~Gt~wYH 79 (491)
..++..+||+|++. |+|+|+|+|+|+ ++|+|||||++|++++||||+++ |||+|+||++|+|+|++++++||||||
T Consensus 26 ~~Ng~~PGP~i~~~~Gd~v~v~v~N~l~~~~tsiHwHG~~~~~~~~~DG~~~vtq~pI~PG~~~~Y~f~~~~~~GT~wYH 105 (534)
T 1zpu_A 26 TCNGQFPWPDITVNKGDRVQIYLTNGMNNTNTSMHFHGLFQNGTASMDGVPFLTQCPIAPGSTMLYNFTVDYNVGTYWYH 105 (534)
T ss_dssp EETTBSSCCCEEEETTCEEEEEEECCCSSCCBCCEEETCCCTTCGGGSCCBTTTBCCBCTTCEEEEEEECSSCCEEEEEE
T ss_pred EECCccCCccEEEECCCEEEEEEEeCCCCCCeeEEcCCcccCCCCcccCCCccccCCcCCCCeEEEEEEeCccceeEEEE
Confidence 34677889999874 899999999999 99999999999999999999999 999999999999999997799999999
Q ss_pred CCccccccCCceeEEEEecCCCCCCCCCCCCCcceEEeeecccCCHHHHHHHH-hc---CCCCCCCceEEEcCcCCCcce
Q 011178 80 PSLAFHKAAGGYGGIKIASRPLIPVPFDPPAGDFTILAGDWYKKNHTDLKAIL-DS---GSDLPFPDGLVINGRGSNANT 155 (491)
Q Consensus 80 ~H~~~q~~~Gl~G~liV~~~~~~~~~~~~~~~e~~l~l~d~~~~~~~~~~~~~-~~---~~~~~~~~~~~vNG~~~~~~~ 155 (491)
||.+.|+++||+|+|||++++. ++ .+|+|++|+|+||+++...++...+ .. .+..+.++.+||||+. .++
T Consensus 106 ~H~~~q~~~Gl~G~liV~~~~~---p~-~~d~e~~l~l~Dw~~~~~~~~~~~~~~~~~~~g~~~~~d~~liNG~~--~~~ 179 (534)
T 1zpu_A 106 SHTDGQYEDGMKGLFIIKDDSF---PY-DYDEELSLSLSEWYHDLVTDLTKSFMSVYNPTGAEPIPQNLIVNNTM--NLT 179 (534)
T ss_dssp CCSSSGGGGTCEEEEEEECTTC---CS-CCSEEEEEEEEEECSSCHHHHHHHHSSTTCTTCCCCCCSEEEETTBS--SCE
T ss_pred EcCcccccCcceeeEEeCCCCC---CC-CCcceEEEEeeccccCCHHHHHHHHhccccCCCCCCCCceEEECCCC--ceE
Confidence 9999999999999999999753 33 4589999999999999887764322 21 2345678999999999 899
Q ss_pred EEEeCCCEEEEEEEEcCCCCeEeEEEeCceeEEEEecCccCCCCccCeEEEcCCceEEEEEEeCCC-CcceEEEEEeecc
Q 011178 156 FTVDQGKTYRFRISNVGISTSINFRIQGHKMLLVEVEGTHTLQNTYDSLDIHLGQSYSVLVRADQP-PQGYYIVISTRFT 234 (491)
Q Consensus 156 ~~v~~g~~~rlR~iN~~~~~~~~~~i~~~~~~via~DG~~~~p~~~~~l~l~pGeR~dv~v~~~~~-~g~~~i~~~~~~~ 234 (491)
++|++|++|||||||+|..+.+.|+|+||+|+|||+||.+++|..+++|.|+|||||||+|++++. .++|||++.....
T Consensus 180 ~~v~~g~~~RlRliNa~~~~~~~~~i~gh~~~vi~~DG~~~~P~~~~~l~l~~gqR~dvlv~~~~~~~~~y~i~~~~~~~ 259 (534)
T 1zpu_A 180 WEVQPDTTYLLRIVNVGGFVSQYFWIEDHEMTVVEIDGITTEKNVTDMLYITVAQRYTVLVHTKNDTDKNFAIMQKFDDT 259 (534)
T ss_dssp EECCSSCEEEEEEEECCSSCCEEEEETTBCEEEEEETTEEEEEEEESCEEECTTCEEEEEEECCSCSSCCEEEEEEECGG
T ss_pred EEEECCCEEEEEEEeccCCceEEEEEcCCeeEEEeccCcCccccEeceEEECccceEEEEEEcCCCCCCcEEEEEecccc
Confidence 999999999999999999999999999999999999999999999999999999999999999864 4789999876432
Q ss_pred -------CCCcceEEEEEecCCCCCCCCCCCCCCC-ccccchhhhhhhhccCCCCCCCCCCCCCCCCccccccceEEEEe
Q 011178 235 -------SQVLSATSVLHYSNSAGSVSGPPPGGPT-TQIDWSLEQARSLRRNLTASGPRPNPQGSYHYGLINTTHTIRLQ 306 (491)
Q Consensus 235 -------~~~~~~~ail~y~~~~~~~~~~~p~~p~-~~~~~~~~~~~~~~~~l~~~~~~~~p~~~~~~~~~~~~~~~~l~ 306 (491)
.......++|+|.++... |..+. ..+...+. . ..+.+....+.+ ..+++++.+.
T Consensus 260 ~~~~~~~~~~~~~~ail~y~~~~~~-----p~~~~~~~~~~~~~---~--~~l~p~~~~~~~--------~~~~~~~~l~ 321 (534)
T 1zpu_A 260 MLDVIPSDLQLNATSYMVYNKTAAL-----PTQNYVDSIDNFLD---D--FYLQPYEKEAIY--------GEPDHVITVD 321 (534)
T ss_dssp GSSSCCTTCCCEEEEEEESCTTSCB-----CCCCCCSCSSCSCC---G--GGCCBSSCCCCC--------CSCSEEEEEE
T ss_pred ccccCCCCCCcceEEEEEeCCCCCC-----CCCCcccccccccc---c--ccceeCCCCCCC--------CCCCeEEEEE
Confidence 113456799999875421 11100 00000000 0 012221111111 1345666665
Q ss_pred cccc-CcCCeEeEEEcCeeeeCCCCccccccccCCCCccccCCCCCCCCCCCcceeeeEEeecCCcEEEEEEEcCCCCCC
Q 011178 307 NTAP-TINGKQRYAVNSVSFIPADTPLKLADYFKIPGVFSVGSIPDNPTGGGAYLQTSVMAADFRGFAEVVFENPEDTLQ 385 (491)
Q Consensus 307 ~~~~-~~~~~~~~~iNg~~f~~~~~p~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~g~~v~~~i~N~~~~~H 385 (491)
.... ..++...|+|||++|..+..|.+.+.+.. +.+.. .+. ....++.++.++.|++|+|+|+|.+.+.|
T Consensus 322 ~~~~~~~~~~~~~~iNg~s~~~~~~P~L~~~~~~--~~~~~-----~~~--~~~~~~~~~~~~~g~~v~ivi~N~~~~~H 392 (534)
T 1zpu_A 322 VVMDNLKNGVNYAFFNNITYTAPKVPTLMTVLSS--GDQAN-----NSE--IYGSNTHTFILEKDEIVEIVLNNQDTGTH 392 (534)
T ss_dssp EEEEECTTSCEEEEETTBCCCCCSSCHHHHHTTS--GGGTT-----CGG--GGCSSSCEEEECTTCEEEEEEEECSSSCE
T ss_pred EEeeccCCceeEEEECCCcccCCCCCceeeeccc--CcccC-----CCc--ccCCCceEEEeCCCCEEEEEEeCCCCCCC
Confidence 4321 12455689999999998888987654421 11110 111 11123567889999999999999998999
Q ss_pred ceeccCCCeEEEeeccC----------CCCCCCCCCcccCCCCceeeEEeCCCCEEEEEEEccCcceeeeeecchhhhhc
Q 011178 386 SWHIDGHNFFAVGMDGG----------EWTPASRLTYNLRDTISRCTVQVYPKSWTAVYVPLDNVGMWNIRSENWARQYL 455 (491)
Q Consensus 386 P~HlHG~~F~Vl~~g~g----------~~~~~~~~~~~~~~p~~rDTv~v~p~~~~~irf~adnpG~w~~HCHil~H~d~ 455 (491)
|||||||+||||+++.+ .|++.....+ ..+|.|||||.|++++|++|||+|||||.|+|||||++|++.
T Consensus 393 P~HLHGh~F~Vl~~~~~~~~~~~G~p~~~~~~~~~~~-~~~p~~RDTv~V~pgg~v~IrF~aDNPG~W~~HCHi~~H~~~ 471 (534)
T 1zpu_A 393 PFHLHGHAFQTIQRDRTYDDALGEVPHSFDPDNHPAF-PEYPMRRDTLYVRPQSNFVIRFKADNPGVWFFHCHIEWHLLQ 471 (534)
T ss_dssp EEEETTCCEEEEEECCCCCGGGTCCCCCCBTTBCCCC-CSSCEEESEEEECTTCEEEEEEECCSCEEEEEEECCHHHHHT
T ss_pred CeEecCCceEEEeecCCccccccCcccccCccccccc-cCCCCeeeEEEeCCCCEEEEEEEeCCCeeEEEEeCchhHhhc
Confidence 99999999999999864 4444322222 468999999999999999999999999999999999999999
Q ss_pred ceEEEEEEecCCccCccC--CCCCCc-chhcccc
Q 011178 456 GQQFYLRVYSSANSWRDE--YPIPSN-ALLCGRA 486 (491)
Q Consensus 456 GMm~~~~V~~~~~~~~~~--~~~p~~-~~~c~~~ 486 (491)
|||+.|.+.. +++ ++. .++|++ ...|..+
T Consensus 472 GM~~~~~~~~-~~~-~~~~~~~~p~~~~~~C~~~ 503 (534)
T 1zpu_A 472 GLGLVLVEDP-FGI-QDAHSQQLSENHLEVCQSC 503 (534)
T ss_dssp TCEEEEEECH-HHH-HHCGGGSCCHHHHHHHHHT
T ss_pred CCeEEEEECc-ccc-ccccccCCChhHhhhhhcc
Confidence 9999998754 332 233 566765 4566544
No 4
>3t6v_A Laccase; beta barrel, oxidoreductase; HET: CBS; 2.00A {Steccherinum ochraceum} PDB: 3t6w_A* 3t6x_A* 3t6z_A* 3t71_A*
Probab=100.00 E-value=8.1e-90 Score=720.44 Aligned_cols=441 Identities=22% Similarity=0.317 Sum_probs=336.9
Q ss_pred CCcccCCCCeEEEe--eeEEEEEEecCCC-----CCeeeecccCCCCCCCCCCCCC-CCCCCCCCCeEEEEEEeCCCccc
Q 011178 4 MNHFSSLGCSLITH--LYTHLVVLNFIYM-----APLITLNGVQQRRNSWQDGVYG-TNCPIPPGKNFTYVLQVKDQIGS 75 (491)
Q Consensus 4 ~~~~~~~G~~l~v~--d~v~i~~~N~l~~-----~~siH~HG~~~~~~~~~DG~~~-~q~~i~PG~~~~Y~f~~~~~~Gt 75 (491)
..++..|||+||+. |+|+|+|+|+|++ +|||||||++|.+++||||+++ |||+|+||++|+|+|++++++||
T Consensus 27 ~~NG~~PGP~I~~~~GD~v~v~v~N~l~~~~~~~~tsiHwHGl~~~~~~~~DGv~~vtq~pI~PG~sftY~f~~~~~~GT 106 (495)
T 3t6v_A 27 NAGGTFPGPVIAGNVGDNFQIVTFNQLIECSMLVDTSIHWHGEFQKGTNWADGPAFITQCPIIVGNSFSYNFNVPGMAGT 106 (495)
T ss_dssp EETTSSSCCEEEEETTCEEEEEEEECCCCGGGCSCBCEEEETCCCTTCGGGSCCBTTTBCCBCTTCEEEEEEECTTCCEE
T ss_pred EECCcccCCeEEEECCcEEEEEEEECCCCccCCCceEEEeCCcccCCCccccCCCccccCCCCCCCeEEEEEEeCCCCce
Confidence 35678899999874 8999999999985 7999999999999999999999 99999999999999999879999
Q ss_pred eeEeCCccccccCCceeEEEEecCCCC-CCCCCCCCCcceEEeeecccCCHHHHHHHHhcCCCCCCCceEEEcCcCC---
Q 011178 76 YFYFPSLAFHKAAGGYGGIKIASRPLI-PVPFDPPAGDFTILAGDWYKKNHTDLKAILDSGSDLPFPDGLVINGRGS--- 151 (491)
Q Consensus 76 ~wYH~H~~~q~~~Gl~G~liV~~~~~~-~~~~~~~~~e~~l~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~vNG~~~--- 151 (491)
||||||.+.|+++||+|+|||+++++. ..+|+..++|++|+|+||+++....+ .+..+..+|+++|||+++
T Consensus 107 ~wYHsH~~~q~~~GL~G~lIV~~~~~~~~~~~~~d~~e~~l~l~Dw~~~~~~~~-----~~~~p~~~d~~liNG~g~~~~ 181 (495)
T 3t6v_A 107 YWYHSHLTTQYCDGLRGPFVVYDPNDPDANLYDVDDDTTIITLADWYHVLAKEM-----GAGGAITADSTLIDGLGRTHV 181 (495)
T ss_dssp EEEEECSTTGGGGTCEEEEEEECTTCTTGGGCSBCSGGGEEEEEEECSSCGGGS-----CSSSCCCCSEEEETTBCCBSS
T ss_pred eeeeccchhHHhcCceEEEEEcCccccccccCCCCCceeEEEEecccCCchhhh-----ccCCCCCCcEEEECCcCcCCC
Confidence 999999999999999999999986541 12343335678999999999876432 122344789999999863
Q ss_pred -----CcceEEEeCCCEEEEEEEEcCCCCeEeEEEeCceeEEEEecCccCCCCccCeEEEcCCceEEEEEEeCCCCcceE
Q 011178 152 -----NANTFTVDQGKTYRFRISNVGISTSINFRIQGHKMLLVEVEGTHTLQNTYDSLDIHLGQSYSVLVRADQPPQGYY 226 (491)
Q Consensus 152 -----~~~~~~v~~g~~~rlR~iN~~~~~~~~~~i~~~~~~via~DG~~~~p~~~~~l~l~pGeR~dv~v~~~~~~g~~~ 226 (491)
..+.++|++|++|||||||+|..+.+.|+|+||+|+|||+||.+++|..+++|.|+|||||||+|++++++|+||
T Consensus 182 ~~~~~~~~~~~v~~G~~~RlRliN~~~~~~~~~~i~gh~~~via~DG~~~~P~~~~~l~i~pGqR~dvlv~~~~~~g~y~ 261 (495)
T 3t6v_A 182 NVAAVPLSVITVEVGKRYRMRLVSISCDPNYDFSIDGHDMTIIETDGVDSQELTVDEIQIFAAQRYSFVLNANQPVGNYW 261 (495)
T ss_dssp SCCCCCCCEEEECTTCEEEEEEEECCSSCCEEEEETTCCEEEEEETTEEEEEEEESBEEECTTCEEEEEEECCSCSSEEE
T ss_pred CcccCCceEEEEcCCCEEEEEEEecCCCeeEEEEECCCeEEEEEeCCcccCCEEeeeEEEcCceEEEEEEECCCCCceEE
Confidence 247899999999999999999999999999999999999999999999999999999999999999998789999
Q ss_pred EEEEeeccCC---CcceEEEEEecCCCCCCCCCCCCC-CCccccchhhhhhhhccCCCCCCCCCCCCCCCCccccccceE
Q 011178 227 IVISTRFTSQ---VLSATSVLHYSNSAGSVSGPPPGG-PTTQIDWSLEQARSLRRNLTASGPRPNPQGSYHYGLINTTHT 302 (491)
Q Consensus 227 i~~~~~~~~~---~~~~~ail~y~~~~~~~~~~~p~~-p~~~~~~~~~~~~~~~~~l~~~~~~~~p~~~~~~~~~~~~~~ 302 (491)
|++....... .....|+|+|.++....+...+.. +..+.+ +.+|.+....+.|... . ....+++
T Consensus 262 i~a~~~~~~~~~~~~~~~ail~Y~~~~~~~p~~~~~~~~~~~~~---------~~~L~p~~~~~~p~~~-~--~~~~d~~ 329 (495)
T 3t6v_A 262 IRANPNSGGEGFDGGINSAILRYDGATTADPVTVASTVHTKCLI---------ETDLHPLSRNGVPGNP-H--QGGADCN 329 (495)
T ss_dssp EEEEESSSSCSCGGGTTEEEEEETTSCSSCCCCCCCSSCSSBCC---------GGGCCBSSCCCCSSCS-S--TTCSSEE
T ss_pred EEEecccCccccCCCceEEEEEECCCCCCCCCCCCCCCCccccc---------cccccccccccCCCcc-C--CCCCcEE
Confidence 9998643222 123579999987642211100000 001100 1123332222112100 0 0124566
Q ss_pred EEEeccccCcCCeEeEEEcCeeeeCCCCccccccccCCCCccccCCCCCCCCCCCcceeeeEEeecCCcEEEEEEE-cCC
Q 011178 303 IRLQNTAPTINGKQRYAVNSVSFIPADTPLKLADYFKIPGVFSVGSIPDNPTGGGAYLQTSVMAADFRGFAEVVFE-NPE 381 (491)
Q Consensus 303 ~~l~~~~~~~~~~~~~~iNg~~f~~~~~p~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~g~~v~~~i~-N~~ 381 (491)
+.+.... ++ ..|+|||++|..+..|+|.+.+. +.++.. .......++.++.|++|+|+|+ |..
T Consensus 330 ~~l~~~~---~~-~~w~iNg~s~~~~~~P~L~~~~~---g~~~~~---------~~~~~~~v~~~~~g~~V~ivl~~n~~ 393 (495)
T 3t6v_A 330 LNLSLGF---AC-GNFVINGVSFTPPTVPVLLQICS---GANTAA---------DLLPSGSVISLPSNSTIEIALPAGAA 393 (495)
T ss_dssp EECCEEE---ET-TEEEETTBCCCCCSSCHHHHHHT---TCCSST---------TSSSTTSEEEECTTCEEEEEEECCSS
T ss_pred EEEEEEe---cC-cEEEEcCEecCCCCCcchhhhhc---CCcCcc---------cccCCcceEEecCCCEEEEEEccCCC
Confidence 6554421 12 37999999999888898766542 211110 0011245788999999999998 667
Q ss_pred CCCCceeccCCCeEEEeeccCCCCCCCCCCcccCCCCceeeEEeCC-CCEEEEEEEccCcceeeeeecchhhhhcceEEE
Q 011178 382 DTLQSWHIDGHNFFAVGMDGGEWTPASRLTYNLRDTISRCTVQVYP-KSWTAVYVPLDNVGMWNIRSENWARQYLGQQFY 460 (491)
Q Consensus 382 ~~~HP~HlHG~~F~Vl~~g~g~~~~~~~~~~~~~~p~~rDTv~v~p-~~~~~irf~adnpG~w~~HCHil~H~d~GMm~~ 460 (491)
.+.||||||||+|+||++++. ..+|+.+|.||||+.|++ |+|++|||+|||||.|+|||||++|++.|||+.
T Consensus 394 ~~~HP~HLHGh~F~vl~~~g~-------~~~n~~~P~~rDtv~v~~~g~~~~irf~adnPG~W~~HCHi~~H~~~Gm~~~ 466 (495)
T 3t6v_A 394 GGPHPFHLHGHDFAVSESASN-------STSNYDDPIWRDVVSIGGVGDNVTIRFCTDNPGPWFLHCHIDWHLDAGFAIV 466 (495)
T ss_dssp SCCCEEEETTCCEEEEECTTC-------CCCCSSSCCEESEEECCSTTCEEEEEEECCSCEEEEEEESCHHHHHTTCEEE
T ss_pred CCCcceeecCCcEEEEecCCC-------CCcccCCCCCccEEEcCCCCcEEEEEEEcCCCeeEEEEecchhHhhcCCeEE
Confidence 788999999999999987532 247889999999999997 899999999999999999999999999999999
Q ss_pred EEEecCCccCccCCCCCCc-chhcccc
Q 011178 461 LRVYSSANSWRDEYPIPSN-ALLCGRA 486 (491)
Q Consensus 461 ~~V~~~~~~~~~~~~~p~~-~~~c~~~ 486 (491)
|. +.++++ ++..++|++ ..+|..+
T Consensus 467 ~~-e~~~~~-~~~~~~p~~~~~~C~~~ 491 (495)
T 3t6v_A 467 FA-EDIPNT-ASANPVPEAWSNLCPSY 491 (495)
T ss_dssp EE-ETHHHH-HHHCCCCHHHHHHHHHH
T ss_pred EE-EChhHh-ccccCCCHHHHHHhhHh
Confidence 95 455543 333456765 5689655
No 5
>3pxl_A Laccase; 4-copper protein, metal-binding, oxidoreductase, type-2 Cu-D; HET: NAG BMA MAN; 1.20A {Trametes hirsuta} PDB: 3fpx_A* 3v9c_A* 3div_A* 2h5u_A* 2xyb_A* 1kya_A* 1gyc_A* 2qt6_A* 2hrg_A* 2hrh_A* 4a2f_A* 2vdz_A* 4a2d_A* 4a2e_A* 4a2g_A* 4a2h_A* 2ve0_A* 2vds_A* 2hzh_A* 3kw7_A*
Probab=100.00 E-value=1.8e-89 Score=717.77 Aligned_cols=441 Identities=22% Similarity=0.345 Sum_probs=337.2
Q ss_pred CCcccCCCCeEEEe--eeEEEEEEecCCC-----CCeeeecccCCCCCCCCCCCCC-CCCCCCCCCeEEEEEEeCCCccc
Q 011178 4 MNHFSSLGCSLITH--LYTHLVVLNFIYM-----APLITLNGVQQRRNSWQDGVYG-TNCPIPPGKNFTYVLQVKDQIGS 75 (491)
Q Consensus 4 ~~~~~~~G~~l~v~--d~v~i~~~N~l~~-----~~siH~HG~~~~~~~~~DG~~~-~q~~i~PG~~~~Y~f~~~~~~Gt 75 (491)
..++..+||+||+. |+|+|+|+|+|++ +|||||||++|.+++||||+++ |||+|+||++|+|+|++++++||
T Consensus 26 ~~NG~~PGP~I~~~~GD~v~V~v~N~l~~~~~~~~tsiHwHGl~~~~~~~~DGv~~vtq~pI~PG~s~tY~f~~~~~~GT 105 (499)
T 3pxl_A 26 VVNGVTPGPLVAGNIGDRFQLNVIDNLTNHTMLKSTSIHWHGFFQHGTNWADGPAFINQCPISPGHSFLYDFQVPDQAGT 105 (499)
T ss_dssp EETTBSSCCCEEEETTCEEEEEEEECCCCGGGCSCBCEEEETCCCTTCGGGSCCBTTTBCCBCTTCEEEEEEECSSCCEE
T ss_pred EECCcccCCeEEEeCCCEEEEEEEECCCCccCCCceEEEeCCcccCCCccccCCCccccCCCCCCCeEEEEEEcCCCCce
Confidence 35678889999874 8899999999985 7999999999999999999999 99999999999999999878999
Q ss_pred eeEeCCccccccCCceeEEEEecCCCC-CCCCCCCCCcceEEeeecccCCHHHHHHHHhcCCCCCCCceEEEcCcCC---
Q 011178 76 YFYFPSLAFHKAAGGYGGIKIASRPLI-PVPFDPPAGDFTILAGDWYKKNHTDLKAILDSGSDLPFPDGLVINGRGS--- 151 (491)
Q Consensus 76 ~wYH~H~~~q~~~Gl~G~liV~~~~~~-~~~~~~~~~e~~l~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~vNG~~~--- 151 (491)
||||||.+.|+++||+|+|||+++++. ..+|+..++|++|+|+||+++.... .+..+..+|+++|||+++
T Consensus 106 ~wYHsH~~~q~~~GL~G~lIV~~~~~~~~~~~~~d~~~~~l~l~Dw~~~~~~~------~~~~p~~~d~~liNG~~~~~~ 179 (499)
T 3pxl_A 106 FWYHSHLSTQYCDGLRGPFVVYDPNDPHASRYDVDNDDTVITLADWYHTAAKL------GPRFPGGADATLINGKGRAPS 179 (499)
T ss_dssp EEEEECSTTGGGGTCEEEEEEECTTCTTGGGCSBCSGGGEEEEEEECSSCTTT------SCSSCSSCSEEEETTBCCCTT
T ss_pred eeeeccchhHHhccceeEEEEcCCcccccccCCCCCceEEEEEEcccCCcccc------ccCCCCCCcEEEECCCCcCCC
Confidence 999999999999999999999986531 1234333567899999999986532 122344789999999863
Q ss_pred ----CcceEEEeCCCEEEEEEEEcCCCCeEeEEEeCceeEEEEecCccCCCCccCeEEEcCCceEEEEEEeCCCCcceEE
Q 011178 152 ----NANTFTVDQGKTYRFRISNVGISTSINFRIQGHKMLLVEVEGTHTLQNTYDSLDIHLGQSYSVLVRADQPPQGYYI 227 (491)
Q Consensus 152 ----~~~~~~v~~g~~~rlR~iN~~~~~~~~~~i~~~~~~via~DG~~~~p~~~~~l~l~pGeR~dv~v~~~~~~g~~~i 227 (491)
..+.++|++|++|||||||+|..+.+.|+|+||+|+|||+||.+++|..+++|.|+|||||||+|++++++|+|||
T Consensus 180 ~~~~~~~~~~v~~G~~~RlRliNa~~~~~~~~~i~gh~~~via~DG~~~~P~~~~~l~i~pGqR~dvlv~~~~~~g~y~i 259 (499)
T 3pxl_A 180 DSVAELSVIKVTKGKRYRFRLVSLSCNPNHTFSIDGHNLTIIEVDSVNSQPLEVDSIQIFAAQRYSFVLDANQAVDNYWI 259 (499)
T ss_dssp CTTCCCCEEEECTTCEEEEEEEECCSSCCEEEEETTBCEEEEEETTEEEEEEEESBEEECTTCEEEEEEECCSCSSEEEE
T ss_pred CCCCCcceEEEcCCCEEEEEEEecCCCeeEEEEECCCeEEEEEECCcccCceEeeeEEECCCcEEEEEEECCCCCceEEE
Confidence 2579999999999999999999999999999999999999999999999999999999999999999987899999
Q ss_pred EEEeeccCC---CcceEEEEEecCCCCCCCCCCCCCCCccccchhhhhhhhccCCCCCCCCCCCCCCCCccccccceEEE
Q 011178 228 VISTRFTSQ---VLSATSVLHYSNSAGSVSGPPPGGPTTQIDWSLEQARSLRRNLTASGPRPNPQGSYHYGLINTTHTIR 304 (491)
Q Consensus 228 ~~~~~~~~~---~~~~~ail~y~~~~~~~~~~~p~~p~~~~~~~~~~~~~~~~~l~~~~~~~~p~~~~~~~~~~~~~~~~ 304 (491)
++....... .....|+|+|.++....+...+..+....+ +.+|.+....+.|.... ....++++.
T Consensus 260 ~a~~~~~~~~~~~~~~~ail~Y~~~~~~~p~~~~~~~~~~~~---------~~~L~p~~~~~~p~~~~---~~~~d~~~~ 327 (499)
T 3pxl_A 260 RANPNFGNVGFDGGINSAILRYDGAPAVEPTTNQTTSVKPLN---------EVDLHPLVSTPVPGAPS---SGGVDKAIN 327 (499)
T ss_dssp EEEESSSSCSCGGGTTEEEEEETTSCSSCCCCCCCCCSSBCC---------GGGCCBSSCCCCSSCSS---TTCSSEEEE
T ss_pred EEecccCccccCCCceEEEEEeCCCCCCCCCCCCCCCCcccc---------cccccccccccCCCccc---CCCCcEEEE
Confidence 998643222 123579999987642111100000001100 11233332222221100 013456666
Q ss_pred EeccccCcCCeEeEEEcCeeeeCCCCccccccccCCCCccccCCCCCCCCCCCcceeeeEEeecCCcEEEEEEE---cCC
Q 011178 305 LQNTAPTINGKQRYAVNSVSFIPADTPLKLADYFKIPGVFSVGSIPDNPTGGGAYLQTSVMAADFRGFAEVVFE---NPE 381 (491)
Q Consensus 305 l~~~~~~~~~~~~~~iNg~~f~~~~~p~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~g~~v~~~i~---N~~ 381 (491)
+.... ++ ..|+|||++|..++.|+|++.+. +..... .......++.++.|++|+|+|+ |..
T Consensus 328 l~~~~---~~-~~w~iNg~s~~~~~~P~L~~~~~---g~~~~~---------~~~~~~~v~~~~~g~~V~ivl~~~~n~~ 391 (499)
T 3pxl_A 328 MAFNF---NG-SNFFINGASFVPPTVPVLLQILS---GAQTAQ---------DLLPSGSVYVLPSNASIEISFPATAAAP 391 (499)
T ss_dssp CCEEE---CS-SCEEETTBCCCCCSSCHHHHHHT---TCCSTT---------TSSSTTSEEEECTTCEEEEEEECCTTSC
T ss_pred EEEEe---cC-cEEEEcCEecCCCCCchhhhhhc---CCcccc---------ccCCCceeEEecCCCEEEEEEecCcccC
Confidence 55421 22 37999999999888998766542 211100 0011245788999999999999 566
Q ss_pred CCCCceeccCCCeEEEeeccCCCCCCCCCCcccCCCCceeeEEeCC---CCEEEEEEEccCcceeeeeecchhhhhcceE
Q 011178 382 DTLQSWHIDGHNFFAVGMDGGEWTPASRLTYNLRDTISRCTVQVYP---KSWTAVYVPLDNVGMWNIRSENWARQYLGQQ 458 (491)
Q Consensus 382 ~~~HP~HlHG~~F~Vl~~g~g~~~~~~~~~~~~~~p~~rDTv~v~p---~~~~~irf~adnpG~w~~HCHil~H~d~GMm 458 (491)
.+.||||||||+|+||++++. ..+|+.+|.||||+.|++ ++|++|||+|||||.|+|||||++|++.|||
T Consensus 392 ~~~HP~HLHGh~F~Vl~~~g~-------~~~n~~~P~~rDtv~v~~~~pg~~~~irf~adnPG~W~~HCHi~~H~~~Gm~ 464 (499)
T 3pxl_A 392 GAPHPFHLHGHTFAVVRSAGS-------TVYNYDNPIFRDVVSTGTPAAGDNVTIRFDTNNPGPWFLHCHIDFHLEGGFA 464 (499)
T ss_dssp SCSCEEEETTCCEEEEECTTC-------CCCCSSSCCEESEEECCCGGGTCEEEEEEECCSCEEEEEEESSHHHHHTTCE
T ss_pred CCCccceecCCcEEEEeccCC-------cccccCCCCccceEEcCCcCCCcEEEEEEEcCCCceEEEEeCChhHhhCCCc
Confidence 778999999999999987431 247889999999999997 9999999999999999999999999999999
Q ss_pred EEEEEecCCccCccCCCCCCc-chhccccc
Q 011178 459 FYLRVYSSANSWRDEYPIPSN-ALLCGRAV 487 (491)
Q Consensus 459 ~~~~V~~~~~~~~~~~~~p~~-~~~c~~~~ 487 (491)
+.|. +.++++ ++...+|++ ...|..+.
T Consensus 465 ~~~~-e~~~~~-~~~~~~p~~~~~~C~~~~ 492 (499)
T 3pxl_A 465 VVMA-EDTPDV-KAVNPVPQAWSDLCPTYD 492 (499)
T ss_dssp EEEE-ESGGGH-HHHSCCCHHHHTHHHHHH
T ss_pred EEEE-EChhHh-ccccCCCHHHHHhhhHhh
Confidence 9994 555553 333456765 56897654
No 6
>1v10_A Laccase; multicopper blue oxidase, oxidase; 1.7A {Rigidoporus lignosus} SCOP: b.6.1.3 b.6.1.3 b.6.1.3
Probab=100.00 E-value=1e-89 Score=727.03 Aligned_cols=445 Identities=23% Similarity=0.310 Sum_probs=339.5
Q ss_pred CCCcccCCCCeEEEe--eeEEEEEEecCC-----CCCeeeecccCCCCCCCCCCCCC-CCCCCCCCCeEEEEEEeCCCcc
Q 011178 3 WMNHFSSLGCSLITH--LYTHLVVLNFIY-----MAPLITLNGVQQRRNSWQDGVYG-TNCPIPPGKNFTYVLQVKDQIG 74 (491)
Q Consensus 3 ~~~~~~~~G~~l~v~--d~v~i~~~N~l~-----~~~siH~HG~~~~~~~~~DG~~~-~q~~i~PG~~~~Y~f~~~~~~G 74 (491)
|-.++..+||+||+. |+|+|+|+|+|+ ++|||||||+++++++|+||+++ |||+|+||++|+|+|++.+++|
T Consensus 46 ~~~NG~~PGP~i~~~~Gd~v~v~v~N~l~~~~~~~~tsiHwHGl~~~~~~~~DGv~~vtq~~I~PG~s~~Y~f~~~~~~G 125 (521)
T 1v10_A 46 VTAEGTTIAPLITGNIDDRFQINVIDQLTDANMRRATSIHWHGFFQAGTTEMDGPAFVNQCPIIPNESFVYDFVVPGQAG 125 (521)
T ss_dssp EEESSSSSCCCEEEETTCEEEEEEEECCCCTTSCCCBCEEEETCCCTTCGGGSCCBTTTBCCBCTTEEEEEEEECTTCCE
T ss_pred EEECCccCCCcEEEeCCCEEEEEEEECCCCccCCCCceEecCCeeccCCCccCCCcceeeCCcCCCCeEEEEEecCCCCc
Confidence 445678899999874 899999999999 99999999999999999999999 9999999999999999767999
Q ss_pred ceeEeCCccccccCCceeEEEEecCCCC-CCCCCCCCCcceEEeeecccCCHHHHHHHHhcCCCCCCCceEEEcCcCCC-
Q 011178 75 SYFYFPSLAFHKAAGGYGGIKIASRPLI-PVPFDPPAGDFTILAGDWYKKNHTDLKAILDSGSDLPFPDGLVINGRGSN- 152 (491)
Q Consensus 75 t~wYH~H~~~q~~~Gl~G~liV~~~~~~-~~~~~~~~~e~~l~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~vNG~~~~- 152 (491)
|||||||.+.|+++||+|+|||+++++. +.+|+..++|++|+|+||+++...++.. ..+...+.+|+++|||+...
T Consensus 126 T~wYH~H~~~q~~~Gl~G~liV~~~~~~~~~~~~~d~~e~~l~l~D~~~~~~~~~~~--~~~~~~~~~d~~liNG~~~~~ 203 (521)
T 1v10_A 126 TYWYHSHLSTQYCDGLRGAFVVYDPNDPHLSLYDVDDASTVITIADWYHSLSTVLFP--NPNKAPPAPDTTLINGLGRNS 203 (521)
T ss_dssp EEEEEECSTTGGGGTCEEEEEEECTTCTTGGGCSBCSGGGEEEEEEECSSCCC---------CCCSCCSEEEETTBCCCS
T ss_pred cEEEEeccCCchhcCceEEEEEcCCcccccccCCCCCceeEEEEcccccCCHHHHhh--ccCCCCCCCCEEEECCcccCC
Confidence 9999999999999999999999987531 2234333479999999999998766532 22234567899999999831
Q ss_pred -------cceEEEeCCCEEEEEEEEcCCCCeEeEEEeCceeEEEEecCccCCCCccCeEEEcCCceEEEEEEeCCCCcce
Q 011178 153 -------ANTFTVDQGKTYRFRISNVGISTSINFRIQGHKMLLVEVEGTHTLQNTYDSLDIHLGQSYSVLVRADQPPQGY 225 (491)
Q Consensus 153 -------~~~~~v~~g~~~rlR~iN~~~~~~~~~~i~~~~~~via~DG~~~~p~~~~~l~l~pGeR~dv~v~~~~~~g~~ 225 (491)
.+.++|++|++|||||||+|..+.+.|+|+||+|+|||+||.+++|..++++.|+|||||||+|++++.+|+|
T Consensus 204 ~~~~~~~~~~~~v~~G~~~RlRliNa~~~~~~~~~i~gh~~~vi~~DG~~~~p~~~~~l~l~pgqR~dvlv~~~~~~g~y 283 (521)
T 1v10_A 204 ANPSAGQLAVVSVQSGKRYRFRIVSTSCFPNYAFSIDGHRMTVIEVDGVSHQPLTVDSLTIFAGQRYSVVVEANQAVGNY 283 (521)
T ss_dssp SCGGGSCCCEEEECTTCEEEEEEEECCSSCCEEEEETTCCEEEEEETTEEEEEEEESBEEECTTCEEEEEEECCSCSSEE
T ss_pred CCCCCCCceEEEECCCCEEEEEEEecCCcccEEEEECCCeEEEEecCCccccceeeeeEEEcccceEEEEEEcCCCCCce
Confidence 1899999999999999999999999999999999999999999999999999999999999999999878999
Q ss_pred EEEEEeeccCC---CcceEEEEEecCCCCCCCCCCCCCCCccccchhhhhhhhccCCCCCCCCCCCCCCCCccccccceE
Q 011178 226 YIVISTRFTSQ---VLSATSVLHYSNSAGSVSGPPPGGPTTQIDWSLEQARSLRRNLTASGPRPNPQGSYHYGLINTTHT 302 (491)
Q Consensus 226 ~i~~~~~~~~~---~~~~~ail~y~~~~~~~~~~~p~~p~~~~~~~~~~~~~~~~~l~~~~~~~~p~~~~~~~~~~~~~~ 302 (491)
||++....... .....++|+|.+.....+...+. +..+.+ ..+|.+....+.|..... ...+++
T Consensus 284 ~i~~~~~~~~~~~~~~~~~ail~y~~~~~~~p~~~~~-~~~~~~---------~~~l~p~~~~~~p~~~~~---~~~~~~ 350 (521)
T 1v10_A 284 WIRANPSNGRNGFTGGINSAIFRYQGAAVAEPTTSQN-SGTALN---------EANLIPLINPGAPGNPVP---GGADIN 350 (521)
T ss_dssp EEEEEESSSSCSCGGGTTEEEEEETTCCSCCCCCCCC-CSCBCC---------GGGCCBSSCCCCSSCSST---TCSSEE
T ss_pred eeeeccccccccCCCCceeEEEEECCCCCCCCCCCCC-cccccc---------hhhcccCCcccCCCcccC---CcceEE
Confidence 99998653211 12346999998764321111000 001111 012222222222211000 123455
Q ss_pred EEEeccccCcCCe-EeEEEcCeeeeCCCCccccccccCCCCccccCCCCCCCCCCCcceeeeEEeecCCcEEEEEEEcCC
Q 011178 303 IRLQNTAPTINGK-QRYAVNSVSFIPADTPLKLADYFKIPGVFSVGSIPDNPTGGGAYLQTSVMAADFRGFAEVVFENPE 381 (491)
Q Consensus 303 ~~l~~~~~~~~~~-~~~~iNg~~f~~~~~p~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~g~~v~~~i~N~~ 381 (491)
+.+... .++. ..|+|||++|..+..|++.+.+. +.++.. ..+.+..++.++.|++|+|+++|
T Consensus 351 ~~l~~~---~~~~~~~~~iNg~~~~~~~~P~l~~~~~---g~~~~~---------~~~~~~~~~~v~~g~~vei~l~N-- 413 (521)
T 1v10_A 351 LNLRIG---RNATTADFTINGAPFIPPTVPVLLQILS---GVTNPN---------DLLPGGAVISLPANQVIEISIPG-- 413 (521)
T ss_dssp EECCEE---CCSSSSCCEESSCCCCCCSSCHHHHHHH---TCCCGG---------GSSSTTTEEEECTTCEEEEEEEC--
T ss_pred EEEEEe---cCCceeEEEECCCcccCCCCchhhhhhc---CCcccc---------cCCCCceEEEecCCCEEEEEEcC--
Confidence 555431 1222 47999999998877887765432 111100 01123567889999999999999
Q ss_pred CCCCceeccCCCeEEEeeccCCCCCCCCCCcccCCCCceeeEEe-CCCCEEEEEEEccCcceeeeeecchhhhhcceEEE
Q 011178 382 DTLQSWHIDGHNFFAVGMDGGEWTPASRLTYNLRDTISRCTVQV-YPKSWTAVYVPLDNVGMWNIRSENWARQYLGQQFY 460 (491)
Q Consensus 382 ~~~HP~HlHG~~F~Vl~~g~g~~~~~~~~~~~~~~p~~rDTv~v-~p~~~~~irf~adnpG~w~~HCHil~H~d~GMm~~ 460 (491)
.+.||||||||+||||+++.+. .+|+.+|.|||||.| ++++|++|||+|||||.|+|||||++|++.|||+.
T Consensus 414 ~~~HP~HLHGh~F~Vl~~~~~~-------~~n~~~p~~rDTV~V~p~gg~v~Irf~aDNPG~W~~HCHi~~H~~~GM~~~ 486 (521)
T 1v10_A 414 GGNHPFHLHGHNFDVVRTPGSS-------VYNYVNPVRRDVVSIGGGGDNVTFRFVTDNPGPWFLHCHIDWHLEAGLAVV 486 (521)
T ss_dssp CBSCEEEESSCCEEEEECTTCS-------CCCCSSCCEESEEECCBSSCEEEEEEECCSCEEEEEEESCHHHHTTTCEEE
T ss_pred CCCCCEEEccceEEEEecCCCC-------ccccCCCCeeeeEEeCCCCcEEEEEEEeCCCeeEEEeeChHHHHhCCCeEE
Confidence 6889999999999999997653 267889999999999 89999999999999999999999999999999999
Q ss_pred EEEecCCccCccCCCCCC-cchhcccccC
Q 011178 461 LRVYSSANSWRDEYPIPS-NALLCGRAVG 488 (491)
Q Consensus 461 ~~V~~~~~~~~~~~~~p~-~~~~c~~~~~ 488 (491)
|.|...+ . .+..++|+ +.++|..+..
T Consensus 487 ~~v~~~~-~-~~~~~~p~~~~~~C~~~~~ 513 (521)
T 1v10_A 487 FAEDIPN-I-PIANAISPAWDDLCPKYNA 513 (521)
T ss_dssp EEESGGG-H-HHHSCCCHHHHTHHHHHTT
T ss_pred EEECCcc-h-hhccCCChHHhhhchhhhc
Confidence 9886443 2 23445664 5889987764
No 7
>1hfu_A Laccase 1; oxidoreductase, blue multi-copper oxidase, type-2 copper depleted, signal, glycoprotein; HET: MAN NAG NDG; 1.68A {Coprinus cinereus} SCOP: b.6.1.3 b.6.1.3 b.6.1.3 PDB: 1a65_A*
Probab=100.00 E-value=3.4e-89 Score=720.66 Aligned_cols=440 Identities=24% Similarity=0.362 Sum_probs=336.9
Q ss_pred CCCcccCCCCeEEEe--eeEEEEEEecCC-----CCCeeeecccCCCCCCCCCCCCC-CCCCCCCCCeEEEEEEeCCCcc
Q 011178 3 WMNHFSSLGCSLITH--LYTHLVVLNFIY-----MAPLITLNGVQQRRNSWQDGVYG-TNCPIPPGKNFTYVLQVKDQIG 74 (491)
Q Consensus 3 ~~~~~~~~G~~l~v~--d~v~i~~~N~l~-----~~~siH~HG~~~~~~~~~DG~~~-~q~~i~PG~~~~Y~f~~~~~~G 74 (491)
|-.++.. ||+||+. |+|+|+|+|+|+ ++|||||||+++++++++||+++ +||+|+||++|+|+|++.+++|
T Consensus 26 ~~~NG~~-GP~i~~~~Gd~v~v~v~N~l~~~~~~~~tsiHwHG~~~~~~~~~DGv~~vtq~~I~PG~~~~Y~f~~~~~~G 104 (503)
T 1hfu_A 26 ILVNGVH-GPLIRGGKNDNFELNVVNDLDNPTMLRPTSIHWHGLFQRGTNWADGADGVNQCPISPGHAFLYKFTPAGHAG 104 (503)
T ss_dssp EEETTBS-SCEEEEETTCCEEEEEEECCCCTTSCCSBCEEEETCCCTTCGGGSCCBTTTBCCBCTTCEEEEEECCTTCCE
T ss_pred EEECCcc-CCcEEEeCCCEEEEEEEeCCCCccCCCcccEeccceeccCCCccCCCcccccCCcCCCCeEEEEEEeCCCCc
Confidence 3456677 9999984 899999999999 99999999999999999999999 9999999999999999767999
Q ss_pred ceeEeCCccccccCCceeEEEEecCCCC-CCCCCCCCCcceEEeeecccCCHHHHHHHHhcCCCCCCCceEEEcCcCC--
Q 011178 75 SYFYFPSLAFHKAAGGYGGIKIASRPLI-PVPFDPPAGDFTILAGDWYKKNHTDLKAILDSGSDLPFPDGLVINGRGS-- 151 (491)
Q Consensus 75 t~wYH~H~~~q~~~Gl~G~liV~~~~~~-~~~~~~~~~e~~l~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~vNG~~~-- 151 (491)
|||||||.+.|+++||+|+|||+++++. +.+|+..++|++|+|+||+++...++.. .+.+++++|||+..
T Consensus 105 T~wYH~H~~~q~~~Gl~G~liV~~~~~~~~~~~~~d~~e~~l~l~Dw~~~~~~~~~~-------~~~~d~~liNG~~~~~ 177 (503)
T 1hfu_A 105 TFWYHSHFGTQYCDGLRGPMVIYDDNDPHAALYDEDDENTIITLADWYHIPAPSIQG-------AAQPDATLINGKGRYV 177 (503)
T ss_dssp EEEEEECSTTGGGGTCEEEEEEECTTCTTGGGCSBCSTTSEEEEEEECSSCGGGCC----------CCSEEEETTBCCBT
T ss_pred cEEEEecchhhhhCcceeeEEEcCCCCCcccCCCCCCceEEEEEcccccCChHHhcC-------CCCCCEEEECcccccC
Confidence 9999999999999999999999986531 2334333479999999999998765421 15689999999983
Q ss_pred -----CcceEEEeCCCEEEEEEEEcCCCCeEeEEEeCceeEEEEecCccCCCCccCeEEEcCCceEEEEEEeCCCCcceE
Q 011178 152 -----NANTFTVDQGKTYRFRISNVGISTSINFRIQGHKMLLVEVEGTHTLQNTYDSLDIHLGQSYSVLVRADQPPQGYY 226 (491)
Q Consensus 152 -----~~~~~~v~~g~~~rlR~iN~~~~~~~~~~i~~~~~~via~DG~~~~p~~~~~l~l~pGeR~dv~v~~~~~~g~~~ 226 (491)
..+.++|++|++|||||||+|..+.+.|+|+||+|+|||+||.+++|..+++|.|+|||||||+|++++.+|+||
T Consensus 178 ~~~~~~~~~~~v~~g~~~RlRliN~~~~~~~~~~i~gh~~~vi~~DG~~~~p~~~~~l~l~pgeR~dvlv~~~~~~g~y~ 257 (503)
T 1hfu_A 178 GGPAAELSIVNVEQGKKYRMRLISLSCDPNWQFSIDGHELTIIEVDGELTEPHTVDRLQIFTGQRYSFVLDANQPVDNYW 257 (503)
T ss_dssp TCCCCCCCEEEECTTCEEEEEEEECCSSCCEEEEETTCCEEEEEETTEEEEEEEESBEEECTTCEEEEEEECCSCSSEEE
T ss_pred CCCCCcceEEEEcCCCEEEEEEEecCCcccEEEEEcCceEEEEeccCccccccccCeEEEcccceEEEEEEcCCCcccee
Confidence 128999999999999999999999999999999999999999999999999999999999999999998789999
Q ss_pred EEEEeeccCC-------CcceEEEEEecCCCCCCCCCCCCCCC-ccccchhhhhhhhccCCCCCCCCCCCCCCCCccccc
Q 011178 227 IVISTRFTSQ-------VLSATSVLHYSNSAGSVSGPPPGGPT-TQIDWSLEQARSLRRNLTASGPRPNPQGSYHYGLIN 298 (491)
Q Consensus 227 i~~~~~~~~~-------~~~~~ail~y~~~~~~~~~~~p~~p~-~~~~~~~~~~~~~~~~l~~~~~~~~p~~~~~~~~~~ 298 (491)
|++....... .....++|+|.++....+.. +..|. .+++ ..+|.+....+.|..... ..
T Consensus 258 i~a~~~~~~~~~~~~~~~~~~~ail~y~~~~~~~p~~-~~~~~~~~l~---------~~~l~p~~~~~~p~~~~~---~~ 324 (503)
T 1hfu_A 258 IRAQPNKGRNGLAGTFANGVNSAILRYAGAANADPTT-SANPNPAQLN---------EADLHALIDPAAPGIPTP---GA 324 (503)
T ss_dssp EEEEESSCGGGGGGCCGGGTTEEEEEETTSCSSCCCC-CCCSSCCBCC---------GGGCBBSSSCSCSSCSST---TC
T ss_pred eeeccccCCcccccccCCCceEEEEEECCCCCCCCCC-CCCCccCCCc---------cccccccCccCCCCcccC---Cc
Confidence 9997653211 12346999998764321110 00111 1111 012222222222211000 12
Q ss_pred cceEEEEeccccCcCCeEeEEEcCeeeeCCCCccccccccCCCCccccCCCCCCCCCCCcceeeeEEeecCCcEEEEEEE
Q 011178 299 TTHTIRLQNTAPTINGKQRYAVNSVSFIPADTPLKLADYFKIPGVFSVGSIPDNPTGGGAYLQTSVMAADFRGFAEVVFE 378 (491)
Q Consensus 299 ~~~~~~l~~~~~~~~~~~~~~iNg~~f~~~~~p~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~g~~v~~~i~ 378 (491)
.++++.+... .++. .|+|||++|..+..|++.+.+. +.++.. ..+.+..++.++.|++|+|+++
T Consensus 325 ~~~~~~l~~~---~~~~-~~~iNg~~~~~~~~P~l~~~~~---g~~~~~---------~~~~~~~~~~v~~g~~vei~l~ 388 (503)
T 1hfu_A 325 ADVNLRFQLG---FSGG-RFTINGTAYESPSVPTLLQIMS---GAQSAN---------DLLPAGSVYELPRNQVVELVVP 388 (503)
T ss_dssp SSEEEECCEE---EETT-EEEETTBCCCCCSSCHHHHHHT---TCCSGG---------GSSSTTSEEEECSSCEEEEEEE
T ss_pred ceEEEEEEee---ccCc-eEEECCCccCCCCCcchhhhhc---CCcccc---------cCCCCceEEEccCCCEEEEEEE
Confidence 3445544321 1122 7999999998877887765432 111100 1112356788999999999999
Q ss_pred c-CCCCCCceeccCCCeEEEeeccCCCCCCCCCCcccCCCCceeeEEe-CCCCEEEEEEEccCcceeeeeecchhhhhcc
Q 011178 379 N-PEDTLQSWHIDGHNFFAVGMDGGEWTPASRLTYNLRDTISRCTVQV-YPKSWTAVYVPLDNVGMWNIRSENWARQYLG 456 (491)
Q Consensus 379 N-~~~~~HP~HlHG~~F~Vl~~g~g~~~~~~~~~~~~~~p~~rDTv~v-~p~~~~~irf~adnpG~w~~HCHil~H~d~G 456 (491)
| .+.+.||||||||+||||+++.+. .+++.+|.|||||.| ++++|++|||+|||||.|+|||||++|++.|
T Consensus 389 ~n~~~~~HP~HLHGh~F~Vl~~~~~~-------~~n~~~p~~rDTV~V~ppg~~v~irf~adnPG~W~~HCHil~H~~~G 461 (503)
T 1hfu_A 389 AGVLGGPHPFHLHGHAFSVVRSAGSS-------TYNFVNPVKRDVVSLGVTGDEVTIRFVTDNPGPWFFHCHIEFHLMNG 461 (503)
T ss_dssp CCSTTCCCEEEETTCCEEEEECTTCC-------CCCCSSBCEESEEECCSTTCEEEEEEECCSCEEEEEEESSHHHHHTT
T ss_pred CCCCCCCCCEEEecceEEEEecCCCC-------ccccCCCCeeeeEEecCCCceEEEEEEcCCCeeeeEecCchhHhhCC
Confidence 4 557889999999999999997653 257889999999999 8999999999999999999999999999999
Q ss_pred eEEEEEEecCCccCccCCCCCC-cchhcccccC
Q 011178 457 QQFYLRVYSSANSWRDEYPIPS-NALLCGRAVG 488 (491)
Q Consensus 457 Mm~~~~V~~~~~~~~~~~~~p~-~~~~c~~~~~ 488 (491)
||+.|.|...+ + .+..++|. +.++|..+..
T Consensus 462 M~~~~~v~~~~-~-~~~~~~p~~~~~~C~~~~~ 492 (503)
T 1hfu_A 462 LAIVFAEDMAN-T-VDANNPPVEWAQLCEIYDD 492 (503)
T ss_dssp CEEEEEECHHH-H-HHHCCCCHHHHHHHHHHHT
T ss_pred CeEEEEECchh-h-hhccCCChHHhhhccchhh
Confidence 99999886443 2 23345674 5789987754
No 8
>2q9o_A Laccase-1; multicopper oxidase, 2-OXOH oxidoreductase; HET: OHI NAG MAN GOL; 1.30A {Melanocarpus albomyces} SCOP: b.6.1.3 b.6.1.3 b.6.1.3 PDB: 3fu7_A* 3fu8_A* 3fu7_B* 1gw0_A* 2ih9_A* 2ih8_A* 3fu9_A* 3qpk_A* 3dkh_A* 3pps_A*
Probab=100.00 E-value=7.7e-88 Score=717.88 Aligned_cols=449 Identities=21% Similarity=0.321 Sum_probs=339.9
Q ss_pred CCCcccCCCCeEEE--eeeEEEEEEecC-CCCCeeeecccCCCCCCCCCCCCC-CCCCCCC-CCeEEEEEEeCCCcccee
Q 011178 3 WMNHFSSLGCSLIT--HLYTHLVVLNFI-YMAPLITLNGVQQRRNSWQDGVYG-TNCPIPP-GKNFTYVLQVKDQIGSYF 77 (491)
Q Consensus 3 ~~~~~~~~G~~l~v--~d~v~i~~~N~l-~~~~siH~HG~~~~~~~~~DG~~~-~q~~i~P-G~~~~Y~f~~~~~~Gt~w 77 (491)
|-.++..+||+||+ ||+|+|+|+|+| +++|||||||++++++++|||+++ +||+|+| |++|+|+|++ .++||||
T Consensus 58 ~~~Ng~~PGP~i~~~~GD~v~v~v~N~l~~~~tsiHwHG~~~~~~~~~DG~~~~tq~~I~P~G~~~~Y~f~~-~q~GT~w 136 (559)
T 2q9o_A 58 MLINGNIMGPNIVANWGDTVEVTVINNLVTNGTSIHWHGIXQKDTNLHDGANGVTECPIPPKGGQRTYRWRA-RQYGTSW 136 (559)
T ss_dssp EEETTBSSCCCEEEETTCEEEEEEEEECSSCCBCEEEETCCCTTCGGGSCCBTTTBCCBCTTTEEEEEEEEC-CSCEEEE
T ss_pred EEECCcccCCcEEEeCCCEEEEEEEeCCCCCCceEEcCCCccCCCCCcCCCCccccCccCCCCCeEEEEEEC-CCCEEEE
Confidence 34567789999987 489999999999 689999999999999999999999 9999999 9999999999 4899999
Q ss_pred EeCCccccccCCceeEEEEecCCCCCCCCCCCCCcc-eEEeeecccCCHHHHHHHHhcCCCCCCCceEEEcCcCCC----
Q 011178 78 YFPSLAFHKAAGGYGGIKIASRPLIPVPFDPPAGDF-TILAGDWYKKNHTDLKAILDSGSDLPFPDGLVINGRGSN---- 152 (491)
Q Consensus 78 YH~H~~~q~~~Gl~G~liV~~~~~~~~~~~~~~~e~-~l~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~vNG~~~~---- 152 (491)
||||.+.|+++||+|+|||++++. .+ +|.|+ +|+|+||+++...++..... ....+.+++++|||+...
T Consensus 137 YH~H~~~q~~~Gl~G~liV~~~~~--~~---~d~d~~~l~l~Dw~~~~~~~~~~~~~-~~~~~~~d~~liNG~~~~~~~~ 210 (559)
T 2q9o_A 137 YHSHFSAQYGNGVVGTIQINGPAS--LP---YDIDLGVFPITDYYYRAADDLVHFTQ-NNAPPFSDNVLINGTAVNPNTG 210 (559)
T ss_dssp EEECSTTGGGGTCEEEEEEECCCS--SC---CSEEEEEEEEEEECSSCHHHHHHHHT-TSCCCCBSEEEETTBCBCTTTC
T ss_pred EEEcccchhcCCceEEEEecCCCc--CC---CcccceEEEEeccccCCHHHHhhhhh-cCCCCccceeEECCccccCcCC
Confidence 999999999999999999998753 23 47887 99999999998877643222 234567899999999842
Q ss_pred ---cceEEEeCCCEEEEEEEEcCCCCeEeEEEeCceeEEEEecCccCCCCccCeEEEcCCceEEEEEEeCCCCcceEEEE
Q 011178 153 ---ANTFTVDQGKTYRFRISNVGISTSINFRIQGHKMLLVEVEGTHTLQNTYDSLDIHLGQSYSVLVRADQPPQGYYIVI 229 (491)
Q Consensus 153 ---~~~~~v~~g~~~rlR~iN~~~~~~~~~~i~~~~~~via~DG~~~~p~~~~~l~l~pGeR~dv~v~~~~~~g~~~i~~ 229 (491)
.+.++|++|++|||||||+|..+.+.|+|+||+|+|||+||.+++|..+++|.|+|||||||+|++++.+|+|||++
T Consensus 211 ~g~~~~~~v~~g~~~RlRliNa~~~~~~~~~i~gh~~~vi~~DG~~~~p~~~~~l~l~pgeR~dvlv~~~~~~g~y~i~a 290 (559)
T 2q9o_A 211 EGQYANVTLTPGKRHRLRILNTSTENHFQVSLVNHTMTVIAADMVPVNAMTVDSLFLAVGQRYDVVIDASRAPDNYWFNV 290 (559)
T ss_dssp CBCCCEEEECTTCEEEEEEEECCSSCCEEEEETTBCEEEEEETTEEEEEEEESCEEECTTCEEEEEEECCSCSSEEEEEE
T ss_pred CCCceEEEEcCCCEEEEEEEecCCCceEEEEECCCceEEEecCCcccCceEeCeEEEccEEEEEEEEECCCCCCcEEEEE
Confidence 46899999999999999999999999999999999999999999999999999999999999999998789999999
Q ss_pred Ee--ec---cCCCcceEEEEEecCCCCCCCCCCCCCCC-ccccchhhhhhhhccCCCCCCCCCCCCCCCCccccccceEE
Q 011178 230 ST--RF---TSQVLSATSVLHYSNSAGSVSGPPPGGPT-TQIDWSLEQARSLRRNLTASGPRPNPQGSYHYGLINTTHTI 303 (491)
Q Consensus 230 ~~--~~---~~~~~~~~ail~y~~~~~~~~~~~p~~p~-~~~~~~~~~~~~~~~~l~~~~~~~~p~~~~~~~~~~~~~~~ 303 (491)
.. .. ........++|+|.++... +|..+. ...+ . .+.. ...|.+..+.+.|..... ...++++
T Consensus 291 ~~~~~~~~~~~~~~~~~ail~y~~~~~~----~P~~~~~~~~~--~-~~~~-~~~l~p~~~~~~p~~~~~---~~~~~~~ 359 (559)
T 2q9o_A 291 TFGGQAACGGSLNPHPAAIFHYAGAPGG----LPTDEGTPPVD--H-QCLD-TLDVRPVVPRSVPVNSFV---KRPDNTL 359 (559)
T ss_dssp ECCGGGTTCCBSSSCCEEEEEETTSCCS----CCCCCCCCCCC--C-TTCC-CSCCCBSSCCBCCCTTCC---CCGGGEE
T ss_pred EeccccccCCCCCCceeEEEEECCCCCC----CCCCCCCcCCC--c-cccc-ccccccCCCCCCCCcccc---cceeEEE
Confidence 86 21 1123356899999876421 111110 0000 0 0000 012222222212221110 1123445
Q ss_pred EEeccccCcCCeEeEEEcCeeeeC-CCCccccccccCCCCccccCCCCCCCCCCCcceeeeEEeecC-CcEEEEEEEcCC
Q 011178 304 RLQNTAPTINGKQRYAVNSVSFIP-ADTPLKLADYFKIPGVFSVGSIPDNPTGGGAYLQTSVMAADF-RGFAEVVFENPE 381 (491)
Q Consensus 304 ~l~~~~~~~~~~~~~~iNg~~f~~-~~~p~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~-g~~v~~~i~N~~ 381 (491)
.+.... ...+...|+|||++|.. +..|++.+.+.+. ...| .+..++.++. +++++|+++|.+
T Consensus 360 ~~~~~~-~~~~~~~~~iNg~s~~~~~~~P~L~~~~~g~---------~~~~------~~~~~~~~~~~~~v~~~vi~n~~ 423 (559)
T 2q9o_A 360 PVALDL-TGTPLFVWKVNGSDINVDWGKPIIDYILTGN---------TSYP------VSDNIVQVDAVDQWTYWLIENDP 423 (559)
T ss_dssp EEEEEC-SSSSSCEEEETTBCCCCCTTSCHHHHHHHTC---------CCCC------GGGCEEEECCSSCEEEEEEEECT
T ss_pred EEEeec-CCCceEEEEECCEecccCCCCCcHhHhhcCC---------ccCC------CCceEEEcCCCCEEEEEEEeCCC
Confidence 444321 12345789999999974 4678664433211 0011 1345666654 678889999976
Q ss_pred ----CCCCceeccCCCeEEEeecc---------CCCCCC-CCCCcccCCCCceeeEEeCCCCEEEEEEEccCcceeeeee
Q 011178 382 ----DTLQSWHIDGHNFFAVGMDG---------GEWTPA-SRLTYNLRDTISRCTVQVYPKSWTAVYVPLDNVGMWNIRS 447 (491)
Q Consensus 382 ----~~~HP~HlHG~~F~Vl~~g~---------g~~~~~-~~~~~~~~~p~~rDTv~v~p~~~~~irf~adnpG~w~~HC 447 (491)
.+.||||||||+||||+++. |.|++. ....+++.+|.|||||.|++++|++|||+|||||.|||||
T Consensus 424 ~~~~~~~HP~HLHGh~F~Vl~~g~~~~~~~~~~g~~~~~~~~~~~n~~~p~~RDTV~Vp~~g~v~IrF~adNPG~W~~HC 503 (559)
T 2q9o_A 424 EGPFSLPHPMHLHGHDFLVLGRSPDVPAASQQRFVFDPAVDLARLNGDNPPRRDTTMLPAGGWLLLAFRTDNPGAWLFHC 503 (559)
T ss_dssp TSSCCCCEEEEESSSCEEEEEESCCCCTTSCCCCCCCHHHHGGGCCCBSCCEESEEEECTTSEEEEEEECCSCEEEEEEE
T ss_pred ccccCCCCcEEECCCceEEEecccccccccccccccCccccccccccCCCCccceEEccCCccEEEEEEcCCCeeEEEEe
Confidence 68899999999999999987 666542 1245788999999999999999999999999999999999
Q ss_pred cchhhhhcceEEEEEEecCCccCccCCCC--CC-cchhccccc
Q 011178 448 ENWARQYLGQQFYLRVYSSANSWRDEYPI--PS-NALLCGRAV 487 (491)
Q Consensus 448 Hil~H~d~GMm~~~~V~~~~~~~~~~~~~--p~-~~~~c~~~~ 487 (491)
||++|++.|||+.|.|... ++ .+..++ |+ .+++|..+.
T Consensus 504 Hil~H~~~GM~~~~~v~~~-~~-~~~~~~~~p~~~~~~C~~~~ 544 (559)
T 2q9o_A 504 HIAWHVSGGLSVDFLERPA-DL-RQRISQEDEDDFNRVCDEWR 544 (559)
T ss_dssp CCHHHHHTTCEEEEEECHH-HH-GGGCCHHHHHHHHHHHHHHH
T ss_pred cchhHhhcCCeEEEEECcc-hh-hhccccCCchhhhhhccccc
Confidence 9999999999999987543 32 233444 65 567998764
No 9
>2xu9_A Laccase; oxidoreductase, multicopper oxidases; 1.50A {Thermus thermophilus} PDB: 2xuw_A 2xvb_A 2yae_A 2yaf_A 2yah_A 2yam_A 2yao_A 2yap_A 2yaq_A 2yar_A 4ai7_A
Probab=100.00 E-value=1.7e-81 Score=652.08 Aligned_cols=372 Identities=19% Similarity=0.196 Sum_probs=295.2
Q ss_pred CCCcccCCCCeEEE--eeeEEEEEEecCCCCCeeeecccCCCCCCCCCCCCCCCCCCCCCCeEEEEEEeC-CCccceeEe
Q 011178 3 WMNHFSSLGCSLIT--HLYTHLVVLNFIYMAPLITLNGVQQRRNSWQDGVYGTNCPIPPGKNFTYVLQVK-DQIGSYFYF 79 (491)
Q Consensus 3 ~~~~~~~~G~~l~v--~d~v~i~~~N~l~~~~siH~HG~~~~~~~~~DG~~~~q~~i~PG~~~~Y~f~~~-~~~Gt~wYH 79 (491)
|-.++..+||+||+ ||+|+|+|+|+|+++|+|||||+++++ ++||++ +.|+||++|+|+|+++ +++||||||
T Consensus 38 ~~~ng~~pGP~i~~~~Gd~v~v~~~N~l~~~tsiHwHG~~~~~--~~DG~~---~~I~PG~~~~Y~f~~~~~~~GT~wYH 112 (439)
T 2xu9_A 38 LTYGGSFPGPTLRVRPRDTVRLTLENRLPEPTNLHWHGLPISP--KVDDPF---LEIPPGESWTYEFTVPKELAGTFWYH 112 (439)
T ss_dssp EEETTBSSCCEEEECTTCEEEEEEEECSSSCBCCEEETCCCCT--TTSCTT---CCBCTTCEEEEEEECCSSCCEEEEEE
T ss_pred EEECCcccCCEEEEeCCCEEEEEEEECCCCCcceEeCCCCCCc--cccCCc---ccCCCCCeEEEEEecCCCCCcceEec
Confidence 34567788999987 488999999999999999999999754 899986 4599999999999986 489999999
Q ss_pred CCcc----ccccCCceeEEEEecCCCCCCCCCCCCCcceEEeeecccCCHHH----HHHHHhcCCCCCCCceEEEcCcCC
Q 011178 80 PSLA----FHKAAGGYGGIKIASRPLIPVPFDPPAGDFTILAGDWYKKNHTD----LKAILDSGSDLPFPDGLVINGRGS 151 (491)
Q Consensus 80 ~H~~----~q~~~Gl~G~liV~~~~~~~~~~~~~~~e~~l~l~d~~~~~~~~----~~~~~~~~~~~~~~~~~~vNG~~~ 151 (491)
||.+ .|+++||+|+|||+++++. .+...+++|++|+|+||+++.... ....+ ....++.++|||+.
T Consensus 113 ~H~~~~t~~q~~~Gl~G~liV~~~~~~-~~~~~~~~e~~l~l~D~~~~~~~~~~~~~~~~~----~g~~~~~~~iNG~~- 186 (439)
T 2xu9_A 113 PHLHGRVAPQLFAGLLGALVVESSLDA-IPELREAEEHLLVLKDLALQGGRPAPHTPMDWM----NGKEGDLVLVNGAL- 186 (439)
T ss_dssp CCCTTSHHHHHHTTCCEEEEECCGGGG-SHHHHTSEEEEEEEEEECEETTEECCCCHHHHH----HCCCCSEEEETTEE-
T ss_pred cCCCCchHHHHHhhCeEEEEEcCcccc-CccCCCCCcEEEEEEeeeeCCCCcCCCCccccc----cCCCCCEEEECCcc-
Confidence 9974 7999999999999986532 111134789999999999885310 00111 12357899999999
Q ss_pred CcceEEEeCCCEEEEEEEEcCCCCeEeEEEeCceeEEEEecCccC-CCCccCeEEEcCCceEEEEEEeCCCCcceEEEEE
Q 011178 152 NANTFTVDQGKTYRFRISNVGISTSINFRIQGHKMLLVEVEGTHT-LQNTYDSLDIHLGQSYSVLVRADQPPQGYYIVIS 230 (491)
Q Consensus 152 ~~~~~~v~~g~~~rlR~iN~~~~~~~~~~i~~~~~~via~DG~~~-~p~~~~~l~l~pGeR~dv~v~~~~~~g~~~i~~~ 230 (491)
.|.++|++| +|||||||+|+.+.+.|+|+||+|+|||+||.++ +|..++++.|+|||||||+|++++ +|+|+|++.
T Consensus 187 -~p~l~v~~g-~~RlRliN~~~~~~~~~~i~gh~~~vi~~DG~~~~~p~~~~~l~l~pgeR~dv~v~~~~-~G~~~l~~~ 263 (439)
T 2xu9_A 187 -RPTLVAQKA-TLRLRLLNASNARYYRLALQDHPLYLIAADGGFLEEPLEVSELLLAPGERAEVLVRLRK-EGRFLLQAL 263 (439)
T ss_dssp -SCEEECSSS-EEEEEEEECCSSCCEEEEETTBCEEEEEETTEEEEEEEEESCEEECTTCEEEEEEECCS-SEEEEEEEE
T ss_pred -CCcEEecCC-eEEEEEEecCCCceEEEEECCceEEEEecCCCCCCCceEeceEEECCceeEEEEEEcCC-CceEEEEec
Confidence 899999999 9999999999999999999999999999999997 899999999999999999999996 899999986
Q ss_pred eeccC------------------CCcceEEEEEecCCCCCCCCCCCCCCCccccchhhhhhhhccCCCCCCCCCCCCCCC
Q 011178 231 TRFTS------------------QVLSATSVLHYSNSAGSVSGPPPGGPTTQIDWSLEQARSLRRNLTASGPRPNPQGSY 292 (491)
Q Consensus 231 ~~~~~------------------~~~~~~ail~y~~~~~~~~~~~p~~p~~~~~~~~~~~~~~~~~l~~~~~~~~p~~~~ 292 (491)
..... ......++++|.+... ..++|.. +.+....+.+
T Consensus 264 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~--~~~~p~~------------------l~~~~~l~~~---- 319 (439)
T 2xu9_A 264 PYDRGAMGMMDMGGMAHAMPQGPSRPETLLYLIAPKNPK--PLPLPKA------------------LSPFPTLPAP---- 319 (439)
T ss_dssp CCCCCCEEEECSSSCCEEEECCSCCCEEEEEEEECSSCC--CCCCCSC------------------CCCCCCCCCC----
T ss_pred ccccCCccccccccccccccCCCCCcceeEEEEecCCCc--cccCccc------------------CCCcccCCCC----
Confidence 43211 1124567888876531 1112210 0000000111
Q ss_pred CccccccceEEEEeccccCcCCeEeEEEcCeeeeCCCCccccccccCCCCccccCCCCCCCCCCCcceeeeEEeecCCcE
Q 011178 293 HYGLINTTHTIRLQNTAPTINGKQRYAVNSVSFIPADTPLKLADYFKIPGVFSVGSIPDNPTGGGAYLQTSVMAADFRGF 372 (491)
Q Consensus 293 ~~~~~~~~~~~~l~~~~~~~~~~~~~~iNg~~f~~~~~p~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~g~~ 372 (491)
..++++.+.... . ...|+|||++|..+..+ +.++.|++
T Consensus 320 -----~~~r~~~l~~~~---~-g~~~~iNg~~~~~~~~~---------------------------------~~~~~g~~ 357 (439)
T 2xu9_A 320 -----VVTRRLVLTEDM---M-AARFFINGQVFDHRRVD---------------------------------LKGQAQTV 357 (439)
T ss_dssp -----SEEEEEEEEEEG---G-GTEEEETTBCCCTTCCC---------------------------------EEECTTCE
T ss_pred -----CcceEEEEEeec---c-CceEeECCEECCCCCCc---------------------------------eecCCCCE
Confidence 123677666422 1 14799999998532211 45788999
Q ss_pred EEEEEEcCCCCCCceeccCCCeEEEeeccCCCCCCCCCCcccCCCCceeeEEeCCCCEEEEEEEccCcceeeeeecchhh
Q 011178 373 AEVVFENPEDTLQSWHIDGHNFFAVGMDGGEWTPASRLTYNLRDTISRCTVQVYPKSWTAVYVPLDNVGMWNIRSENWAR 452 (491)
Q Consensus 373 v~~~i~N~~~~~HP~HlHG~~F~Vl~~g~g~~~~~~~~~~~~~~p~~rDTv~v~p~~~~~irf~adnpG~w~~HCHil~H 452 (491)
++|+|+|.+.+.||||||||+||||+++++. ..+|.|||||.|+|+++++|||++||||.|+|||||++|
T Consensus 358 ~~~~~~N~~~~~HP~HLHG~~F~Vl~~~g~~----------~~~p~~rDTv~v~p~~~v~i~f~adnpG~w~~HCHil~H 427 (439)
T 2xu9_A 358 EVWEVENQGDMDHPFHLHVHPFQVLSVGGRP----------FPYRAWKDVVNLKAGEVARLLVPLREKGRTVFHCHIVEH 427 (439)
T ss_dssp EEEEEEECSSSCEEEEESSCCBEEEEETTEE----------CSSCCCBSEEEECTTCEEEEEEECCSCEEEEEEESSHHH
T ss_pred EEEEEEcCCCCCCCceeCCCcEEEEeeCCCC----------CCCCCCeEEEEeCCCCEEEEEEEcCCCCCEEEECCcchh
Confidence 9999999998999999999999999997653 236899999999999999999999999999999999999
Q ss_pred hhcceEEEEEEe
Q 011178 453 QYLGQQFYLRVY 464 (491)
Q Consensus 453 ~d~GMm~~~~V~ 464 (491)
+|.|||+.|+|+
T Consensus 428 ~~~GMm~~~~Vg 439 (439)
T 2xu9_A 428 EDRGMMGVLEVG 439 (439)
T ss_dssp HHTTCEEEEEEC
T ss_pred hhcCCcEEEEeC
Confidence 999999999984
No 10
>2uxt_A Protein SUFI, SUFI; oxidoreductase, periplasmic, cupredoxin-like, FTS mutant suppressor; 1.90A {Escherichia coli} PDB: 2uxv_A
Probab=100.00 E-value=3.6e-81 Score=650.58 Aligned_cols=378 Identities=17% Similarity=0.151 Sum_probs=296.5
Q ss_pred CCCcccCCCCeEEE--eeeEEEEEEecCCCCCeeeecccCCCCCCCCCCCCCCCCCCCCCCeEEEEEEeCCCccceeEeC
Q 011178 3 WMNHFSSLGCSLIT--HLYTHLVVLNFIYMAPLITLNGVQQRRNSWQDGVYGTNCPIPPGKNFTYVLQVKDQIGSYFYFP 80 (491)
Q Consensus 3 ~~~~~~~~G~~l~v--~d~v~i~~~N~l~~~~siH~HG~~~~~~~~~DG~~~~q~~i~PG~~~~Y~f~~~~~~Gt~wYH~ 80 (491)
|-.++..+||+||+ ||+|+|+|+|+|+++|||||||++++++ +||++ ||+|+||++|+|+|++.+++|||||||
T Consensus 41 ~~~ng~~pGP~i~~~~Gd~v~v~~~N~l~~~tsiHwHG~~~~~~--~DG~~--~~~i~PG~~~~Y~f~~~~~~GT~wYH~ 116 (451)
T 2uxt_A 41 WGINGRYLGPTIRVWKGDDVKLIYSNRLTENVSMTVAGLQVPGP--LMGGP--ARMMSPNADWAPVLPIRQNAATLWYHA 116 (451)
T ss_dssp EEETTSSBCCEEEEETTCEEEEEEEECSSSCBCEEEETCCCCGG--GSCSG--GGCBCTTCEECCEEECCSCSEEEEEEE
T ss_pred EEECCcccCceEEEeCCCEEEEEEEECCCCCccEEECCccCCCC--CCCCC--cCcCCCCCeEEEEEEcCCCCcceEEec
Confidence 44567889999987 4899999999999999999999998765 99998 899999999999999975699999999
Q ss_pred Cc----cccccCCceeEEEEecCCCCCCCCCC--CCCcceEEeeecccCCHHHHHHHHhcCCCCCCCceEEEcCcCCCcc
Q 011178 81 SL----AFHKAAGGYGGIKIASRPLIPVPFDP--PAGDFTILAGDWYKKNHTDLKAILDSGSDLPFPDGLVINGRGSNAN 154 (491)
Q Consensus 81 H~----~~q~~~Gl~G~liV~~~~~~~~~~~~--~~~e~~l~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~vNG~~~~~~ 154 (491)
|. ..|+++||+|+|||+++++...+++. .++|++|+|+||+++.+.++. +...+.....+++++|||+. .|
T Consensus 117 H~~~~t~~q~~~Gl~G~liV~~~~~~~~~~p~~y~~~e~~l~l~D~~~~~~~~~~-~~~~~~~~~~~d~~liNG~~--~p 193 (451)
T 2uxt_A 117 NTPNRTAQQVYNGLAGMWLVEDEVSKSLPIPNHYGVDDFPVIIQDKRLDNFGTPE-YNEPGSGGFVGDTLLVNGVQ--SP 193 (451)
T ss_dssp CCTTTHHHHHHTTCEEEEEEECHHHHHSSSCCCBTTTEEEEEEEEEEECTTSCEE-CCCCSSSCCCCSEEEETTEE--SC
T ss_pred CCCCchhhhHhhcceEEEEEecCcccccCCCccCCCceEEEEEEeeecCCCCcee-cccccCCCCcCCEEEECCcc--cc
Confidence 98 58999999999999997543232322 488999999999998654431 11122345678999999999 89
Q ss_pred eEEEeCCCEEEEEEEEcCCCCeEeEEE-eCceeEEEEecCccC-CCCccCeEEEcCCceEEEEEEeCCCCcceEEEEEee
Q 011178 155 TFTVDQGKTYRFRISNVGISTSINFRI-QGHKMLLVEVEGTHT-LQNTYDSLDIHLGQSYSVLVRADQPPQGYYIVISTR 232 (491)
Q Consensus 155 ~~~v~~g~~~rlR~iN~~~~~~~~~~i-~~~~~~via~DG~~~-~p~~~~~l~l~pGeR~dv~v~~~~~~g~~~i~~~~~ 232 (491)
.++|++| +|||||||+|..+.+.|+| +||+|+|||+||.++ +|..++++.|+|||||||+|++++ +++|+|++...
T Consensus 194 ~~~v~~g-~~RlRliNa~~~~~~~~~i~dg~~~~vi~~DG~~~~~P~~~~~l~l~pgeR~dvlv~~~~-~~~~~l~~~~~ 271 (451)
T 2uxt_A 194 YVEVSRG-WVRLRLLNASNSRRYQLQMNDGRPLHVISGDQGFLPAPVSVKQLSLAPGERREILVDMSN-GDEVSITCGEA 271 (451)
T ss_dssp EEEECSS-EEEEEEEECCSSCCEEEEETTSCCEEEEECSSSEEEEEEEESSEEECTTCEEEEEEECTT-CCCEEEEC---
T ss_pred eEEecCC-EEEEEEEccCCceeEEEEECCCCeEEEEEeCCCccCCceEeceEEECceeEEEEEEEeCC-CCEEEEEecCc
Confidence 9999999 9999999999999999999 899999999999987 899999999999999999999995 68899987653
Q ss_pred cc-----------CCCcceEEEEEecCCCCCCCCCCCCCCCccccchhhhhhhhccCCCCCCCCCCCCCCCCccccccce
Q 011178 233 FT-----------SQVLSATSVLHYSNSAGSVSGPPPGGPTTQIDWSLEQARSLRRNLTASGPRPNPQGSYHYGLINTTH 301 (491)
Q Consensus 233 ~~-----------~~~~~~~ail~y~~~~~~~~~~~p~~p~~~~~~~~~~~~~~~~~l~~~~~~~~p~~~~~~~~~~~~~ 301 (491)
.. .......++++|........ .....| ..|.+....+. ....++
T Consensus 272 ~~~~~~~~~~~~~~~~~~~~~il~~~~~~~~~~-~~~~~p---------------~~L~~~~~~~~--------~~~~~~ 327 (451)
T 2uxt_A 272 ASIVDRIRGFFEPSSILVSTLVLTLRPTGLLPL-VTDSLP---------------MRLLPTEIMAG--------SPIRSR 327 (451)
T ss_dssp -------------CCCCSCCEEEEEEECSCCC-----CCC---------------SCSSSSCCCCC--------CCSEEE
T ss_pred cccccccccccccCCCCCCcceEEEEecCCCcC-ccccCc---------------cccCCCCCCCC--------CCcceE
Confidence 21 01123357888875431110 000111 01211111110 113456
Q ss_pred EEEEeccccCcCCeEeEEEcCeeeeCCCCccccccccCCCCccccCCCCCCCCCCCcceeeeEEeecCCcEEEEEEEcCC
Q 011178 302 TIRLQNTAPTINGKQRYAVNSVSFIPADTPLKLADYFKIPGVFSVGSIPDNPTGGGAYLQTSVMAADFRGFAEVVFENPE 381 (491)
Q Consensus 302 ~~~l~~~~~~~~~~~~~~iNg~~f~~~~~p~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~g~~v~~~i~N~~ 381 (491)
++.+. + .|+|||++|..+.. .+.++.|++|+|+|+|.
T Consensus 328 ~~~l~-------~--~~~iNg~~f~~~~~---------------------------------~~~~~~G~~~~~~l~N~- 364 (451)
T 2uxt_A 328 DISLG-------D--DPGINGQLWDVNRI---------------------------------DVTAQQGTWERWTVRAD- 364 (451)
T ss_dssp EEEEC-------S--SSSBTTBCCCTTCC---------------------------------CEEEETTCEEEEEEEEE-
T ss_pred EEEEe-------e--EEEECCEeCCCCCC---------------------------------cEEcCCCCEEEEEEECC-
Confidence 66554 1 69999999853211 14678899999999997
Q ss_pred CCCCceeccCCCeEEEeeccCCCCCCCCCCcccCCCCceeeEEeCCCCEEEEEEEccCcce----eeeeecchhhhhcce
Q 011178 382 DTLQSWHIDGHNFFAVGMDGGEWTPASRLTYNLRDTISRCTVQVYPKSWTAVYVPLDNVGM----WNIRSENWARQYLGQ 457 (491)
Q Consensus 382 ~~~HP~HlHG~~F~Vl~~g~g~~~~~~~~~~~~~~p~~rDTv~v~p~~~~~irf~adnpG~----w~~HCHil~H~d~GM 457 (491)
+.||||||||+||||++++.. ++..+|.|||||.| +++++|+|+|||||. |||||||++|||.||
T Consensus 365 -~~HP~HLHGh~F~Vl~~~G~~--------~~~~~p~~rDTv~v--g~~~~i~~~~dnpg~~~g~w~~HCHil~H~d~GM 433 (451)
T 2uxt_A 365 -EPQAFHIEGVMFQIRNVNGAM--------PFPEDRGWKDTVWV--DGQVELLVYFGQPSWAHFPFYFNSQTLEMADRGS 433 (451)
T ss_dssp -EEEEEEETTCEEEEEEETTBC--------CCGGGSSCBSEEEE--EEEEEEEEECCSCCBTTBCEEEEESSHHHHHTTC
T ss_pred -CCcCeEECCceEEEEeeCCcC--------CCcccCCCccEEEE--CCEEEEEEEeCCCCCCCCceEEeCCchhHHhCCC
Confidence 689999999999999996321 45678999999999 899999999999988 999999999999999
Q ss_pred EEEEEEecCC
Q 011178 458 QFYLRVYSSA 467 (491)
Q Consensus 458 m~~~~V~~~~ 467 (491)
|+.|+|.+.+
T Consensus 434 m~~~~v~~~~ 443 (451)
T 2uxt_A 434 IGQLLVNPVP 443 (451)
T ss_dssp EEEEEEECSC
T ss_pred cEEEEEccCc
Confidence 9999997653
No 11
>3abg_A Bilirubin oxidase; cleavage on PAIR of basic residues, glyco metal-binding, oxidoreductase; HET: NAG BMA NDG; 2.30A {Myrothecium verrucaria} PDB: 2xll_A*
Probab=100.00 E-value=6e-80 Score=652.06 Aligned_cols=392 Identities=14% Similarity=0.111 Sum_probs=302.8
Q ss_pred CCCcccCCCCeEEEe--eeEEEEEEecCCCCCeeeecccCCCCCCCCCCCCCCCCCCCCCCeEEEEEEeCCCccceeEeC
Q 011178 3 WMNHFSSLGCSLITH--LYTHLVVLNFIYMAPLITLNGVQQRRNSWQDGVYGTNCPIPPGKNFTYVLQVKDQIGSYFYFP 80 (491)
Q Consensus 3 ~~~~~~~~G~~l~v~--d~v~i~~~N~l~~~~siH~HG~~~~~~~~~DG~~~~q~~i~PG~~~~Y~f~~~~~~Gt~wYH~ 80 (491)
|-.++..+||+||+. |+|+|+|+|+|+++|||||||+++++ ++||++ ||+|+||++|+|+|++.+++|||||||
T Consensus 60 ~~~NG~~PGPtI~~~~Gd~v~v~v~N~l~~~tsiHwHGl~~~~--~~DG~~--~~~i~PG~~~~Y~f~~~~~~GT~WYH~ 135 (534)
T 3abg_A 60 VGYDGMSPGPTFQVPRGVETVVRFINNAEAPNSVHLHGSFSRA--AFDGWA--EDITEPGSFKDYYYPNRQSARTLWYHD 135 (534)
T ss_dssp BEETSCSSEEEEEEETTCCEEEEEEECSSSCBCEEEETCCCCT--TTTTCS--SSCBSSCSCCCEEECCCSSSCEEEEEE
T ss_pred EEECCcCcCceEEEeCCcEEEEEEEECCCCCceEEECCCcCCC--CCCCCC--CCCCCCCCeEEEEEecCCcceeEEEec
Confidence 445778899999984 89999999999999999999999865 599985 799999999999999976689999999
Q ss_pred Ccc----ccccCCceeEEEEecCCCCCCCCCC--CCCcceEEeeecccCCHHHHHHHHhcC-CCCCCCceEEEcCcCCCc
Q 011178 81 SLA----FHKAAGGYGGIKIASRPLIPVPFDP--PAGDFTILAGDWYKKNHTDLKAILDSG-SDLPFPDGLVINGRGSNA 153 (491)
Q Consensus 81 H~~----~q~~~Gl~G~liV~~~~~~~~~~~~--~~~e~~l~l~d~~~~~~~~~~~~~~~~-~~~~~~~~~~vNG~~~~~ 153 (491)
|.+ .|+++||+|+|||+++++...+++. +++|++|+|+||+++.++++.. ..+ .....+|.++|||+. .
T Consensus 136 H~~~~t~~q~~~Gl~G~liV~~~~~~~~~lp~~~~~~d~~l~l~d~~~~~~g~~~~--~~~~~~~~~gd~~lvNG~~--~ 211 (534)
T 3abg_A 136 HAMHITAENAYRGQAGLYMLTDPAEDALNLPSGYGEFDIPMILTSKQYTANGNLVT--TNGELNSFWGDVIHVNGQP--W 211 (534)
T ss_dssp CCTTCHHHHHHTBCEEEEEEECTTTTTSCTTCCHHHHSCCEEEEEECBCSSSCBCC--CTTCSSCCCCSEEEETTEE--S
T ss_pred CccccchhhhhhcceEEEEEECCcccccCCCccCCcceEEEEEeeeeecCCCceec--cCCCCccccCceeccCCcc--C
Confidence 986 5889999999999998765444433 3678999999999886544311 111 134468999999999 8
Q ss_pred ceEEEeCCCEEEEEEEEcCCCCeEeEEEeC-------ceeEEEEecCcc-CCCCccCeEEEcCCceEEEEEEeCCCCc-c
Q 011178 154 NTFTVDQGKTYRFRISNVGISTSINFRIQG-------HKMLLVEVEGTH-TLQNTYDSLDIHLGQSYSVLVRADQPPQ-G 224 (491)
Q Consensus 154 ~~~~v~~g~~~rlR~iN~~~~~~~~~~i~~-------~~~~via~DG~~-~~p~~~~~l~l~pGeR~dv~v~~~~~~g-~ 224 (491)
+.++|++ ++|||||||+|..+.+.|+|++ |+|+|||+||++ .+|..+++|.|+|||||||+|++++.+| +
T Consensus 212 p~~~v~~-~~~RlRliNa~~~~~~~l~i~~~~~~~~~h~~~vIa~DG~~~~~P~~~~~l~l~pgeR~dvlv~~~~~~g~~ 290 (534)
T 3abg_A 212 PFKNVEP-RKYRFRFLDAAVSRSFGLYFADTDAIDTRLPFKVIASDSGLLEHPADTSLLYISMAERYEVVFDFSDYAGKT 290 (534)
T ss_dssp CBCBCCS-SEEEEEEEECCSSCCEEEEECCSSSTTCCCCEEEEEETTEEEEEEEEESCEEECTTCEEEEEEECSSCTTSE
T ss_pred ceEEecC-cEEEEEEEecCCcceEEEEEecccCcCCCccEEEEEeCCCcccCceEeceEEECCccEEEEEEEcCCCCCce
Confidence 9999998 5999999999999999999987 999999999985 5899999999999999999999997667 5
Q ss_pred eEEEEEeec--c----CCCcceEEEEEecCCCCCCCCCCCCCCCccccchhhhhhhhccCCCCCCCCCCCCCCCCccccc
Q 011178 225 YYIVISTRF--T----SQVLSATSVLHYSNSAGSVSGPPPGGPTTQIDWSLEQARSLRRNLTASGPRPNPQGSYHYGLIN 298 (491)
Q Consensus 225 ~~i~~~~~~--~----~~~~~~~ail~y~~~~~~~~~~~p~~p~~~~~~~~~~~~~~~~~l~~~~~~~~p~~~~~~~~~~ 298 (491)
|+|++.... + .......++++|.....+........| ..|.+.. .+.+. ..
T Consensus 291 ~~l~~~~~~~~~~~~~~~~~~~~~il~~~~~~~~~~~~~~~~P---------------~~L~~~~-~p~~~-------~~ 347 (534)
T 3abg_A 291 IELRNLGGSIGGIGTDTDYDNTDKVMRFVVADDTTQPDTSVVP---------------ANLRDVP-FPSPT-------TN 347 (534)
T ss_dssp EEEECCCCSSSSCCSCSSSTTTSEEEEEECCCCSSCSCCCCCC---------------CCCCCCS-CCCCC-------CC
T ss_pred EEEEeccccccccccccCcCCcceeEEEecCCCCcCCCCCCCc---------------cccccCC-CCCCc-------cc
Confidence 999874311 0 111234588998755421000000011 0111111 01111 13
Q ss_pred cceEEEEeccccCcCCeEeEEEcCeeeeCCCCccccccccCCCCccccCCCCCCCCCCCcceeeeEEeecCCcEEEEEEE
Q 011178 299 TTHTIRLQNTAPTINGKQRYAVNSVSFIPADTPLKLADYFKIPGVFSVGSIPDNPTGGGAYLQTSVMAADFRGFAEVVFE 378 (491)
Q Consensus 299 ~~~~~~l~~~~~~~~~~~~~~iNg~~f~~~~~p~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~g~~v~~~i~ 378 (491)
.++++.+... ...|+|||++|.++..|.+ +.++.|++++|+|+
T Consensus 348 ~~~~~~~~~~------~~~w~iNG~~f~~~~~p~l-------------------------------~~v~~G~~~~w~i~ 390 (534)
T 3abg_A 348 TPRQFRFGRT------GPTWTINGVAFADVQNRLL-------------------------------ANVPVGTVERWELI 390 (534)
T ss_dssp CCEEEECSCC------CSTTCCCCBTTBCTTSCCC-------------------------------CEECTTCEEEEEEE
T ss_pred cceEEEEecc------CceeEECCcccCCCCCcce-------------------------------eeccCCCEEEEEEE
Confidence 4567766531 2369999999975444432 34678999999999
Q ss_pred cCCC-CCCceeccCCCeEEEeeccCCCCCCCCCCcccCCCCceeeEEeCCCCEEEEEEE-ccCcceeeeeecchhhhhcc
Q 011178 379 NPED-TLQSWHIDGHNFFAVGMDGGEWTPASRLTYNLRDTISRCTVQVYPKSWTAVYVP-LDNVGMWNIRSENWARQYLG 456 (491)
Q Consensus 379 N~~~-~~HP~HlHG~~F~Vl~~g~g~~~~~~~~~~~~~~p~~rDTv~v~p~~~~~irf~-adnpG~w~~HCHil~H~d~G 456 (491)
|.+. +.||||||||+||||+++.|.+.. ...++.+ .|||||.|+|+++++|||+ +||||.|||||||++|+|.|
T Consensus 391 N~~~~~~HP~HLHG~~F~Vl~~~~g~~~~---~~~~~~~-~~rDTV~v~pg~~v~I~~~~adnpG~w~~HCHil~H~d~G 466 (534)
T 3abg_A 391 NAGNGWTHPIHIHLVDFKVISRTSGNNAR---TVMPYES-GLKDVVWLGRRETVVVEAHYAPFPGVYMFHCHNLIHEDHD 466 (534)
T ss_dssp ECSSSCCCCEEESSCCEEEEEESSCCSSS---CCCSGGG-SCBSEECCCSSEEEEEEEECCSCCEEEEEEESCHHHHHTT
T ss_pred cCCCCCCcCEEECCeeEEEEEEcCCCCcC---cCCcccc-CCcCeEEcCCCCEEEEEEEECCCCccEEEecChHHHHhcC
Confidence 9874 589999999999999996554321 1234555 8999999999999999998 89999999999999999999
Q ss_pred eEEEEEEecCC
Q 011178 457 QQFYLRVYSSA 467 (491)
Q Consensus 457 Mm~~~~V~~~~ 467 (491)
||+.|+|...+
T Consensus 467 Mm~~~~V~~~~ 477 (534)
T 3abg_A 467 MMAAFNATVLP 477 (534)
T ss_dssp CEEEEEECSSC
T ss_pred CceEEEEEecc
Confidence 99999998655
No 12
>3aw5_A Multicopper oxidase; beta barrel, oxidoreductase; 2.00A {Pyrobaculum aerophilum}
Probab=100.00 E-value=9.7e-80 Score=638.81 Aligned_cols=379 Identities=15% Similarity=0.174 Sum_probs=294.1
Q ss_pred CCCccc-CCCCeEEEe--eeEEEEEEecCCCCCeeeecccCCCCCCCCCCCCCCCCCCCCCCeEEEEEEeCCCccceeEe
Q 011178 3 WMNHFS-SLGCSLITH--LYTHLVVLNFIYMAPLITLNGVQQRRNSWQDGVYGTNCPIPPGKNFTYVLQVKDQIGSYFYF 79 (491)
Q Consensus 3 ~~~~~~-~~G~~l~v~--d~v~i~~~N~l~~~~siH~HG~~~~~~~~~DG~~~~q~~i~PG~~~~Y~f~~~~~~Gt~wYH 79 (491)
|-.++. .+||+||+. |+|+|+|+|+|+++|||||||++++ +++||+++ |+|+||++|+|+|++++++||||||
T Consensus 28 ~~~Ng~~~pGP~i~~~~Gd~v~v~~~N~l~~~tsiHwHG~~~~--~~~DG~~~--~~i~PG~~~~Y~f~~~~~~GT~wYH 103 (448)
T 3aw5_A 28 SGYMAEGVLNPTIILRRGQRVDMTLKNKLTEPTIVHWHGFDVN--WHNDAHPS--FAITPGESYNYSFDVVNRAGTYLYH 103 (448)
T ss_dssp TEEEETTEESCEEEEETTCEEEEEEEECSSSCBCEEEETCCCC--HHHHTCGG--GCBCTTCEEEEEEECCSCSEEEEEE
T ss_pred EEECCccccCceEEEeCCCEEEEEEEECCCCceeEEeCCccCC--CccCCCCC--ccCCCCCEEEEEEEcCCCCCceEec
Confidence 445667 889999874 8999999999999999999999974 56999997 9999999999999997689999999
Q ss_pred CC----ccccccCCceeEEEEecCCCCCCCCCCCC-CcceEEeeecccCCHHHHHHH--HhcCCCCCCCceEEEcCcCCC
Q 011178 80 PS----LAFHKAAGGYGGIKIASRPLIPVPFDPPA-GDFTILAGDWYKKNHTDLKAI--LDSGSDLPFPDGLVINGRGSN 152 (491)
Q Consensus 80 ~H----~~~q~~~Gl~G~liV~~~~~~~~~~~~~~-~e~~l~l~d~~~~~~~~~~~~--~~~~~~~~~~~~~~vNG~~~~ 152 (491)
|| +..|+++||+|+|||+++++. .+++ ++ +|++|+|+||+++. +++... .........+++++|||+.
T Consensus 104 ~H~~~~~~~q~~~Gl~G~liV~~~~~~-~~l~-~d~~e~~l~l~D~~~~~-~~~~~~~~~~~~~~~~~~~~~liNG~~-- 178 (448)
T 3aw5_A 104 PHPHGLTAKQFYMGQLGLVIVEDSGSD-LGFK-YGVNDLPLVISDRRFIG-GAPVYNPTPMEMIAGFLGNAVLVNGVK-- 178 (448)
T ss_dssp ECCTTTHHHHHHTTCCEEEEEECTTTT-TTCC-BTTTEEEEEEEEEEEET-TEEECCCCHHHHHHCCCCSEEEETTEE--
T ss_pred cCCCCchHHHHhccceEEEEEeCCccc-cCCC-CCCceEEEEEEeeccCC-CcccccccccccccCccccEEEECCcc--
Confidence 99 569999999999999997653 2222 35 89999999999986 432110 0001123568999999999
Q ss_pred cceEEEeCCCEEEEEEEEcCCCCeEeEEE--eC---ceeEEEEecCccCC-CCccCeEEEcCCceEEEEEEeCCCCcceE
Q 011178 153 ANTFTVDQGKTYRFRISNVGISTSINFRI--QG---HKMLLVEVEGTHTL-QNTYDSLDIHLGQSYSVLVRADQPPQGYY 226 (491)
Q Consensus 153 ~~~~~v~~g~~~rlR~iN~~~~~~~~~~i--~~---~~~~via~DG~~~~-p~~~~~l~l~pGeR~dv~v~~~~~~g~~~ 226 (491)
.+.++|++| +|||||||+|+.+.+.|+| ++ |+|+|||+||.+++ |..++++.|+|||||||+|+++ .+.|+
T Consensus 179 ~p~~~v~~g-~~RlRliNa~~~~~~~~~i~~~~~~~~~~~via~DG~~~~~P~~~~~l~l~pgeR~dvlv~~~--~~~y~ 255 (448)
T 3aw5_A 179 DAVFKLSGG-SYRLRLVNGSNARLYMLSIVKKNGDVVPMRLIAVDQGFLARPIEVRALFLAPAERAEVVVELG--EGVYL 255 (448)
T ss_dssp TCEEEEEEE-EEEEEEEECSSSCCEEEEEEETTSCEECEEEEEETTEEEEEEEEESCEEECTTCEEEEEEEEC--SEEEE
T ss_pred cceEEECCC-eEEEEEEcCCCcceEEEEEEcCCCCCccEEEEEeCCCccCCceEeceEEECCcceEEEEEECC--CCceE
Confidence 899999999 9999999999999999999 99 99999999999997 9999999999999999999998 36899
Q ss_pred EEEEeecc--------------CCCcceEEEEEecCCCCCCCCCCCCCCCccccchhhhhhhhccCCCCCCCCCCCCCCC
Q 011178 227 IVISTRFT--------------SQVLSATSVLHYSNSAGSVSGPPPGGPTTQIDWSLEQARSLRRNLTASGPRPNPQGSY 292 (491)
Q Consensus 227 i~~~~~~~--------------~~~~~~~ail~y~~~~~~~~~~~p~~p~~~~~~~~~~~~~~~~~l~~~~~~~~p~~~~ 292 (491)
|++..... .......++++|.+...... |. . |....+.+.
T Consensus 256 l~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------p~-~--------------L~~lp~~~~----- 309 (448)
T 3aw5_A 256 LKNTPFDPMHLEMGHGMQEALPEGSEYTIATFLVEGKGEAVP------VE-A--------------LSDPPPEPP----- 309 (448)
T ss_dssp EEECCCCCCCCTTSSCCCCSSCTTSCEEEEEEEEEEECCCCC------CC-C--------------CSCCCCCCC-----
T ss_pred EEccccccccCccccccccccCCCCCceEEEEEEcCCCCCCC------cc-c--------------cCCCCCCCC-----
Confidence 99875421 01124566778865432110 11 0 111000010
Q ss_pred CccccccceEEEEeccccCcCCeEeEEEcCeeeeCCCCccccccccCCCCccccCCCCCCCCCCCcceeeeEEe-ecCCc
Q 011178 293 HYGLINTTHTIRLQNTAPTINGKQRYAVNSVSFIPADTPLKLADYFKIPGVFSVGSIPDNPTGGGAYLQTSVMA-ADFRG 371 (491)
Q Consensus 293 ~~~~~~~~~~~~l~~~~~~~~~~~~~~iNg~~f~~~~~p~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~-~~~g~ 371 (491)
....++++.+... ...|+|||++|... .|. +. ++.|+
T Consensus 310 ---~~~~~~~~~l~~~------~~~~~iNg~~~~~~-~p~--------------------------------~~~~~~g~ 347 (448)
T 3aw5_A 310 ---KPTRTRRFALSLS------GMQWTINGMFWNAS-NPL--------------------------------FEHVSVEG 347 (448)
T ss_dssp ---CCSEEEEEEEEEE------TTEEEETTBCCCTT-CTT--------------------------------CCCEEECE
T ss_pred ---CCCceEEEEEeCC------CceeeECCCcCCCC-CCc--------------------------------eeccCCCC
Confidence 1234677777641 13599999999532 121 23 57899
Q ss_pred EEEEEEEcCC-CCCCceeccCCCeEEEeeccCCCCC-CCCCCc----ccCCCCceeeEEeCCCCEEEEE--EE---ccCc
Q 011178 372 FAEVVFENPE-DTLQSWHIDGHNFFAVGMDGGEWTP-ASRLTY----NLRDTISRCTVQVYPKSWTAVY--VP---LDNV 440 (491)
Q Consensus 372 ~v~~~i~N~~-~~~HP~HlHG~~F~Vl~~g~g~~~~-~~~~~~----~~~~p~~rDTv~v~p~~~~~ir--f~---adnp 440 (491)
+|+|+|+|.+ .+.||||||||+||||+++ |.+.. .+...+ +..++.|||||.|+|+++++|+ |+ +|||
T Consensus 348 ~v~~~i~N~~~~~~HP~HLHG~~F~Vl~~~-G~~~~~~~~~~~~~~~~p~~~~~rDTv~v~pg~~~~i~vrF~~~~adnp 426 (448)
T 3aw5_A 348 VELWEIVNDKASMPHPMHLHGFPMWIIERK-DSPRQVAELAVDNRGRLPTDLGLKDTVLIWPGETVKIVVNFDAKKRGQL 426 (448)
T ss_dssp EEEEEEEECSSSCCEEEEESSSCBEEEEEE-SCCHHHHTTCCSTTCCCGGGGSCBSEEEECTTCEEEEEEEECGGGTTCE
T ss_pred eEEEEEEcCCCCCCcCEEECCceEEEEEec-CCCcccccccccccCCCccccCCccEEEeCCCCEEEEEEEecccCCCCc
Confidence 9999999998 7899999999999999995 44421 111112 3345679999999999999665 99 9999
Q ss_pred ceeeeeecchhhhhcceEEEEEEe
Q 011178 441 GMWNIRSENWARQYLGQQFYLRVY 464 (491)
Q Consensus 441 G~w~~HCHil~H~d~GMm~~~~V~ 464 (491)
|||||||++|+|.|||+.|+|.
T Consensus 427 --w~~HCHil~H~d~GMm~~~~V~ 448 (448)
T 3aw5_A 427 --FPFHCHNLEHEDGGMMINIAVK 448 (448)
T ss_dssp --EEEEESSHHHHHTTCEEEEEEC
T ss_pred --EEEEcCChHHHhCCCceEEEeC
Confidence 9999999999999999999883
No 13
>2wsd_A Spore coat protein A; oxidoreductase, multi-copper oxidase, sporulation, COTA- LAC copper centre; 1.60A {Bacillus subtilis} PDB: 1gsk_A 1hkp_A 1hkz_A 1hl0_A 1hl1_A 1of0_A* 1ogr_A 1uvw_A* 1w6l_A 1w6w_A 1w8e_A 2bhf_A 2x87_A 2x88_A* 4a67_A 4akq_A 4a68_A* 4akp_A* 4a66_A 4ako_A
Probab=100.00 E-value=1.3e-78 Score=641.51 Aligned_cols=403 Identities=12% Similarity=0.105 Sum_probs=298.8
Q ss_pred CCCcccCCCCeEEEe--eeEEEEEEecCCC----------------------CCeeeecccCCCCCCCCCCCCC---CCC
Q 011178 3 WMNHFSSLGCSLITH--LYTHLVVLNFIYM----------------------APLITLNGVQQRRNSWQDGVYG---TNC 55 (491)
Q Consensus 3 ~~~~~~~~G~~l~v~--d~v~i~~~N~l~~----------------------~~siH~HG~~~~~~~~~DG~~~---~q~ 55 (491)
|-.++..+|||||+. |+|+|+|+|+|++ +|+|||||++++ +++||+++ +||
T Consensus 49 ~~~NG~~PGPtI~~~~Gd~v~v~v~N~L~~~~~~~~~~t~~~~~~~~~~~~~~tsiHwHGl~~~--~~~DG~p~~~i~~g 126 (513)
T 2wsd_A 49 WGYNGLFPGPTIEVKRNENVYVKWMNNLPSTHFLPIDHTIHHSDSQHEEPEVKTVVHLHGGVTP--DDSDGYPEAWFSKD 126 (513)
T ss_dssp EEETTBSSCCBEEEETTCCEEEEEEECCCSSCSSCCCTTSCC-----CCCSCCBCEEEETCCCC--GGGSCCTTSCBCGG
T ss_pred EEECCCccCceEEECCCCEEEEEEEeCCCccccCccccccccccccccCCCCCcEEEcCCCcCC--CccCCCCcccccCC
Confidence 345678899999984 8999999999986 899999999975 56999984 789
Q ss_pred CCCCCCeE---EEEEEeCCCccceeEeCCcc----ccccCCceeEEEEecCCCCCCCCCCCCCcceEEeeecccCCHHHH
Q 011178 56 PIPPGKNF---TYVLQVKDQIGSYFYFPSLA----FHKAAGGYGGIKIASRPLIPVPFDPPAGDFTILAGDWYKKNHTDL 128 (491)
Q Consensus 56 ~i~PG~~~---~Y~f~~~~~~Gt~wYH~H~~----~q~~~Gl~G~liV~~~~~~~~~~~~~~~e~~l~l~d~~~~~~~~~ 128 (491)
+|+||++| +|+|++.+++||||||||.+ .|+++||+|+|||+++++.+.+++.+++|++|+|+||+++.++++
T Consensus 127 ~i~pG~~f~~~~Y~f~~~~~~GT~wYH~H~~~~t~~q~~~Gl~G~liV~~~~~~~~~lp~~d~d~~l~l~D~~~~~~~~~ 206 (513)
T 2wsd_A 127 FEQTGPYFKREVYHYPNQQRGAILWYHDHAMALTRLNVYAGLVGAYIIHDPKEKRLKLPSDEYDVPLLITDRTINEDGSL 206 (513)
T ss_dssp GSSBCTTCCCSEEEECCCSCCEEEEEEECCTTTHHHHHHHTCEEEEEEECGGGGGGCCCCGGGEEEEEEEEEEECTTSCE
T ss_pred cccCCCccceEEEEEecCCCccceEECCCCCCcchhhhhccCeEEEEEeccccccccCCCCCCcEEEEEEeeecCCCCce
Confidence 99999555 99999866899999999986 489999999999999765444455668999999999998865433
Q ss_pred HHHHh-----------cCCCCCCCceEEEcCcCCCcceEEEeCCCEEEEEEEEcCCCCeEeEEEeCc-eeEEEEecCccC
Q 011178 129 KAILD-----------SGSDLPFPDGLVINGRGSNANTFTVDQGKTYRFRISNVGISTSINFRIQGH-KMLLVEVEGTHT 196 (491)
Q Consensus 129 ~~~~~-----------~~~~~~~~~~~~vNG~~~~~~~~~v~~g~~~rlR~iN~~~~~~~~~~i~~~-~~~via~DG~~~ 196 (491)
..... .......+++++|||+. .+.++|+++ +|||||||+|..+.+.|+|++| +|+|||+||.++
T Consensus 207 ~~~~~~~~~~~~~~~~~~~~~~~~d~~liNG~~--~p~~~v~~~-~~RlRliNa~~~~~~~~~i~~~~~~~via~DG~~~ 283 (513)
T 2wsd_A 207 FYPSAPENPSPSLPNPSIVPAFCGETILVNGKV--WPYLEVEPR-KYRFRVINASNTRTYNLSLDNGGDFIQIGSDGGLL 283 (513)
T ss_dssp ECCSSCSSCCTTSCSSCCCSCCCCSEEEETTEE--SCEEECCSS-EEEEEEEECCSSCCEEEEETTCCCEEEEEETTEEE
T ss_pred ecccccccccccccccccccccccceEEECCcc--cceEEecCC-EEEEEEEccCCcceEEEEECCCCeEEEEccCCCcc
Confidence 11000 01123568999999999 899999985 8999999999999999999999 999999999998
Q ss_pred -CCCccCeEEEcCCceEEEEEEeCCCCcceE-EEEEeec-cC-CCcceEEEEEecCCCCCCCCCCCCCCCccccchhhhh
Q 011178 197 -LQNTYDSLDIHLGQSYSVLVRADQPPQGYY-IVISTRF-TS-QVLSATSVLHYSNSAGSVSGPPPGGPTTQIDWSLEQA 272 (491)
Q Consensus 197 -~p~~~~~l~l~pGeR~dv~v~~~~~~g~~~-i~~~~~~-~~-~~~~~~ail~y~~~~~~~~~~~p~~p~~~~~~~~~~~ 272 (491)
+|..+++|.|+|||||||+|++++.+|++. +...... .. ......++|+|..+...........|. .
T Consensus 284 ~~P~~~~~l~l~pgeR~dvlv~~~~~~g~~~~l~~~~~~~~~~~~~~~~~il~~~~~~~~~~~~~~~~p~-~-------- 354 (513)
T 2wsd_A 284 PRSVKLNSFSLAPAERYDIIIDFTAYEGESIILANSAGCGGDVNPETDANIMQFRVTKPLAQKDESRKPK-Y-------- 354 (513)
T ss_dssp EEEEEESEEEECTTCEEEEEEECGGGTTCEEEEEECCCSSSSCCTTTTTEEEEEECCSCCSSCCCCCCCS-B--------
T ss_pred cCceEeCeEEECCeeeEEEEEECCCCCCcEEEEEecccccccCCCCCCcceEEEEeccCcccCccCCCCc-c--------
Confidence 899999999999999999999997667633 3322110 01 112345788887653111100001111 0
Q ss_pred hhhccCCCCCCCCCCCCCCCCccccccceEEEEeccccCcCCeEeEEEcCeeeeCCCCccccccccCCCCccccCCCCCC
Q 011178 273 RSLRRNLTASGPRPNPQGSYHYGLINTTHTIRLQNTAPTINGKQRYAVNSVSFIPADTPLKLADYFKIPGVFSVGSIPDN 352 (491)
Q Consensus 273 ~~~~~~l~~~~~~~~p~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~iNg~~f~~~~~p~~~~~~~~~~~~~~~~~~~~~ 352 (491)
|......+. .....++++.+..... ..+...|.|||++|..+ .
T Consensus 355 ------l~~~~~~~~-------~~~~~~~~~~l~~~~~-~~g~~~~~iNg~~~~~~---~-------------------- 397 (513)
T 2wsd_A 355 ------LASYPSVQH-------ERIQNIRTLKLAGTQD-EYGRPVLLLNNKRWHDP---V-------------------- 397 (513)
T ss_dssp ------CSCCGGGCC-------CCEEEEEEEEEEEEEC-TTSCEEEEETTBCTTSC---C--------------------
T ss_pred ------ccCCCCccc-------CCCcceEEEEEEeecC-CCCCceEeECCccCCCc---c--------------------
Confidence 100000000 0113456666654221 23456799999998532 1
Q ss_pred CCCCCcceeeeEEeecCCcEEEEEEEcCCCCCCceeccCCCeEEEeeccC---CCCCCCC-------CCcccCCCCceee
Q 011178 353 PTGGGAYLQTSVMAADFRGFAEVVFENPEDTLQSWHIDGHNFFAVGMDGG---EWTPASR-------LTYNLRDTISRCT 422 (491)
Q Consensus 353 p~~~~~~~~~~~~~~~~g~~v~~~i~N~~~~~HP~HlHG~~F~Vl~~g~g---~~~~~~~-------~~~~~~~p~~rDT 422 (491)
.+.++.|++|+|+|+|.+.+.||||||||+||||+++.+ .|++... ......++.||||
T Consensus 398 -----------~~~~~~g~~~~w~l~N~~~~~HP~HlHG~~F~Vl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~rDT 466 (513)
T 2wsd_A 398 -----------TETPKVGTTEIWSIINPTRGTHPIHLHLVSFRVLDRRPFDIARYQESGELSYTGPAVPPPPSEKGWKDT 466 (513)
T ss_dssp -----------CBCCBTTCEEEEEEEECSSSCEEEEESSCCEEEEEEEEBCHHHHHHHCCCCBSSCCBCCCGGGSSCBSE
T ss_pred -----------cEecCCCCEEEEEEEcCCCCCcCEeEeCceEEEEEecCcccccccccccccccCCCCCCCccccCcccE
Confidence 024578999999999998889999999999999999752 1211100 0112234569999
Q ss_pred EEeCCCCEEEEEEEc-cCcceeeeeecchhhhhcceEEEEEEecCC
Q 011178 423 VQVYPKSWTAVYVPL-DNVGMWNIRSENWARQYLGQQFYLRVYSSA 467 (491)
Q Consensus 423 v~v~p~~~~~irf~a-dnpG~w~~HCHil~H~d~GMm~~~~V~~~~ 467 (491)
|.|+|+++++|+|++ ||||.|||||||++|+|.|||+.|+|.+++
T Consensus 467 v~v~pg~~~~i~~~f~dnpG~w~~HCHil~H~~~GMm~~~~V~~~~ 512 (513)
T 2wsd_A 467 IQAHAGEVLRIAATFGPYSGRYVWHCHALEHEDYDMMRPMDITDPH 512 (513)
T ss_dssp EEECTTEEEEEEEECCSCCEEEEEEESCHHHHTTTCEEEEEEBCC-
T ss_pred EEeCCCCEEEEEEEecCCCCCEEEEcCChhhhhcCCceeEEEeCCC
Confidence 999999999999999 899999999999999999999999997653
No 14
>3zx1_A Oxidoreductase, putative; laccase, metallo-oxidase, cuprous oxidase; 1.95A {Campylobacter jejuni subsp}
Probab=100.00 E-value=9.1e-78 Score=625.27 Aligned_cols=379 Identities=17% Similarity=0.171 Sum_probs=288.5
Q ss_pred CCCcccCCCCeEEEe--eeEEEEEEecCCCCCeeeecccCCCCCCCCCCCCCCCCCCCCCCeEEEEEEeCCC-ccceeEe
Q 011178 3 WMNHFSSLGCSLITH--LYTHLVVLNFIYMAPLITLNGVQQRRNSWQDGVYGTNCPIPPGKNFTYVLQVKDQ-IGSYFYF 79 (491)
Q Consensus 3 ~~~~~~~~G~~l~v~--d~v~i~~~N~l~~~~siH~HG~~~~~~~~~DG~~~~q~~i~PG~~~~Y~f~~~~~-~Gt~wYH 79 (491)
|-.++..+||+||+. |+|+|+|+|+|+++|||||||+++ ++++||++ ||+|+||++|+|+|+++++ +||||||
T Consensus 73 ~~~NG~~PGPtIr~~~Gd~v~v~v~N~l~~~tsiHwHGl~~--~~~~DG~p--q~~I~PG~s~~Y~f~~~~~~~GT~WYH 148 (481)
T 3zx1_A 73 YTYNGLVPAPKIEVFEGDKLEILVKNKLKEATTIHWHGVPV--PPDQDGSP--HDPILAGEERIYRFEIPQDSAGTYWYH 148 (481)
T ss_dssp EEETTBSSCCBEEEETTCEEEEEEEECSSSCBCCEEETCCC--CGGGSCCT--TSCBCTTCEEEEEEECCTTCCEEEEEE
T ss_pred EEECCCCCCceEEEECCcEEEEEEEeCCCCCeeEEecCccc--CCccCCCc--cCcCCCCCeEEEEEeCCCCCCceEEEe
Confidence 345678899999885 899999999999999999999997 46799996 8999999999999999743 8999999
Q ss_pred CCc----cccccCCceeEEEEecCCCCCCCCCCCCCcceEEeeecccCCHHHHHH-HHhcCCCCCCCceEEEcCcCCCcc
Q 011178 80 PSL----AFHKAAGGYGGIKIASRPLIPVPFDPPAGDFTILAGDWYKKNHTDLKA-ILDSGSDLPFPDGLVINGRGSNAN 154 (491)
Q Consensus 80 ~H~----~~q~~~Gl~G~liV~~~~~~~~~~~~~~~e~~l~l~d~~~~~~~~~~~-~~~~~~~~~~~~~~~vNG~~~~~~ 154 (491)
||. +.|+++||+|+|||+++++....+ ++++ |+|+||+++.++++.. ..........++.++|||+. .|
T Consensus 149 ~H~~~~t~~q~~~GL~G~lIV~~~~~~~~~~---~~~~-l~l~D~~~~~~g~~~~~~~~~~~~g~~gd~~lvNG~~--~p 222 (481)
T 3zx1_A 149 PHPHYTASKQVFMGLAGAFVIKAKKDALSHL---KEKD-LMISDLRLDENAQIPNNNLNDWLNGREGEFVLINGQF--KP 222 (481)
T ss_dssp CCCTTTHHHHHHTTCCEEEEEECSSCTTTTS---EEEE-EEEEEECCBTTSCCCCCCHHHHHHCCCCSEEEETTEE--SC
T ss_pred ecCCCcchhhhhccceEEEEEcCccccccCC---Ccee-EEEEEEeccCCCccccccchhhccCCcCCEEEECCcc--Cc
Confidence 997 489999999999999976543333 4455 9999999986543310 00000013467899999999 89
Q ss_pred eEEEeCCCEEEEEEEEcCCCCeEeEEEeCceeEEEEecCccC-CCCccCeEEEcCCceEEEEEEeCCCCcceEEEEEeec
Q 011178 155 TFTVDQGKTYRFRISNVGISTSINFRIQGHKMLLVEVEGTHT-LQNTYDSLDIHLGQSYSVLVRADQPPQGYYIVISTRF 233 (491)
Q Consensus 155 ~~~v~~g~~~rlR~iN~~~~~~~~~~i~~~~~~via~DG~~~-~p~~~~~l~l~pGeR~dv~v~~~~~~g~~~i~~~~~~ 233 (491)
+++|++|+ ||||||+|+.+.+.|+|+||+|+|||+||.++ +|..+++|.|+|||||||+|++++ ++.|.|.+....
T Consensus 223 ~l~v~~g~--RlRliNa~~~~~~~l~i~g~~~~vIa~DGg~~~~P~~~~~l~l~pgeR~dvlv~~~~-~~~~~l~~~~~~ 299 (481)
T 3zx1_A 223 KIKLATNE--RIRIYNATAARYLNLRIQGAKFILVGTDGGLIEKTIYKEELFLSPASRVEVLIDAPK-DGNFKLESAYYD 299 (481)
T ss_dssp EEEEETTE--EEEEEECCSSCCEEEEETTCEEEEEEETTEEEEEEEEESSEEECTTCEEEEEEECSS-CEEEEEEECCCC
T ss_pred eEEecCCC--EEEEEecCCCeEEEEEECCCceEEEEcCCCccCCceEeCeEEECCccEEEEEEEcCC-CcEEEEEEeccc
Confidence 99999998 99999999999999999999999999998765 899999999999999999999984 678998875432
Q ss_pred cC-----CCcceEEEEEecCCCCCCCCCCCCCCCccccchhhhhhhhccCCCCCCCCCCCCCCCCccccccceEEEEecc
Q 011178 234 TS-----QVLSATSVLHYSNSAGSVSGPPPGGPTTQIDWSLEQARSLRRNLTASGPRPNPQGSYHYGLINTTHTIRLQNT 308 (491)
Q Consensus 234 ~~-----~~~~~~ail~y~~~~~~~~~~~p~~p~~~~~~~~~~~~~~~~~l~~~~~~~~p~~~~~~~~~~~~~~~~l~~~ 308 (491)
.. .......++++.... ....+|. .|.+..+.+. ...++++.+...
T Consensus 300 ~~g~~~~~~~~~~~~~~~~~~~--~~~~lP~------------------~l~~~~~~~~---------~~~~r~~~l~~~ 350 (481)
T 3zx1_A 300 RDKMMVKEEPNTLFLANINLKK--ENVELPK------------------NLKIFKPSEE---------PKEFKEIIMSED 350 (481)
T ss_dssp CCCSSCCCCCCCEEEEEEEEEC--CCCCCCS------------------CSCCCCCCCC---------CCEEEEEEEEEC
T ss_pred ccCccccCCCCceeEEEEecCC--CCccCCc------------------cccCCCCCCC---------CCcEEEEEEecc
Confidence 10 112233444443222 1111221 0111111111 124566666542
Q ss_pred ccCcC-----Ce--------EeEEEcCeeeeCCCCccccccccCCCCccccCCCCCCCCCCCcceeeeEEeecCCcEEEE
Q 011178 309 APTIN-----GK--------QRYAVNSVSFIPADTPLKLADYFKIPGVFSVGSIPDNPTGGGAYLQTSVMAADFRGFAEV 375 (491)
Q Consensus 309 ~~~~~-----~~--------~~~~iNg~~f~~~~~p~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~g~~v~~ 375 (491)
..... +. ..|+|||+.|.. +.| .+.++.|++|+|
T Consensus 351 ~~~~~~~~~~~~~~~~~~~~~~~~iNG~~~~~-~~~--------------------------------~~~~~~G~~v~w 397 (481)
T 3zx1_A 351 HMQMHGMMGKSEGELKIALASMFLINRKSYDL-KRI--------------------------------DLSSKLGVVEDW 397 (481)
T ss_dssp CSTTTTGGGCCHHHHHHHHHTTEEETTBCCCT-TCC--------------------------------CEEEETTCCEEE
T ss_pred chhcccccccccccccccccceeEECCEeCCC-CCc--------------------------------eEEeCCCCEEEE
Confidence 11000 01 249999998852 111 146789999999
Q ss_pred EEEcCCCCCCceeccCCCeEEEee--ccCCCCCCCCCCcccCCCCceeeEEeCCCCEEEEEEEccCcceeeeeecchhhh
Q 011178 376 VFENPEDTLQSWHIDGHNFFAVGM--DGGEWTPASRLTYNLRDTISRCTVQVYPKSWTAVYVPLDNVGMWNIRSENWARQ 453 (491)
Q Consensus 376 ~i~N~~~~~HP~HlHG~~F~Vl~~--g~g~~~~~~~~~~~~~~p~~rDTv~v~p~~~~~irf~adnpG~w~~HCHil~H~ 453 (491)
+|.|.+.+.|||||||++|||+++ ++... ...++.|||||.|+|+++++|+|+|||||.|||||||++|+
T Consensus 398 ~l~N~~~~~Hp~HlHG~~F~vl~~~~~g~~~--------~~~~~~~kDTv~v~Pg~~~~i~~~~d~pG~w~~HCHil~H~ 469 (481)
T 3zx1_A 398 IVINKSHMDHPFHIHGTQFELISSKLNGKVQ--------KAEFRALRDTINVRPNEELRLRMKQDFKGLRMYHCHILEHE 469 (481)
T ss_dssp EEEECSSSCEEEEETTCCEEEEEEEETTEEE--------ECSSCCEESEEEECTTCEEEEEECCCSCEEEEEEESSHHHH
T ss_pred EEEcCCCCceeEEEeccEEEEEEecccCCCC--------CcccCcccceEEECCCCEEEEEEEcCCCeeEEEEcCChHHH
Confidence 999999899999999999999998 33211 22357899999999999999999999999999999999999
Q ss_pred hcceEEEEEEe
Q 011178 454 YLGQQFYLRVY 464 (491)
Q Consensus 454 d~GMm~~~~V~ 464 (491)
|.|||..|+|.
T Consensus 470 d~GMm~~~~V~ 480 (481)
T 3zx1_A 470 DLGMMGNLEVK 480 (481)
T ss_dssp HTTCEEEEEEE
T ss_pred hcCCceEEEEe
Confidence 99999999996
No 15
>3gyr_A PHS, phenoxazinone synthase; metalloprotein, laccase, multicopper oxidase, hexamer, oxidoreductase, antibiotic biosynthesis; 2.30A {Streptomyces antibioticus}
Probab=100.00 E-value=6.3e-77 Score=645.22 Aligned_cols=427 Identities=14% Similarity=0.084 Sum_probs=286.1
Q ss_pred CCCcccCCCCeEEEe--eeEEEEEEecCCCC-----------------------------------------Ceeeeccc
Q 011178 3 WMNHFSSLGCSLITH--LYTHLVVLNFIYMA-----------------------------------------PLITLNGV 39 (491)
Q Consensus 3 ~~~~~~~~G~~l~v~--d~v~i~~~N~l~~~-----------------------------------------~siH~HG~ 39 (491)
|-.++..+||||++. |+|+|+|+|+|+++ |+|||||+
T Consensus 56 ~gyNg~~PGPti~~~~Gd~v~v~~~N~L~~~~~~h~hg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ttiHwHGl 135 (612)
T 3gyr_A 56 WGYDGQVPGPTIEVRRGQRVRIAWTNRIPKGSEYPVTSVEVPLGPPGTPAPNTEPGRGGVEPNKDVAALPAWSVTHLHGA 135 (612)
T ss_dssp EEETTBSSCCEEEEETTCCEEEEEEECCCTTCCCSEEEEEECCCSTTSCCGGGSCSCTTCCCCHHHHTCCCCBCEEEETC
T ss_pred EEECCcccCcEEEEeCCcEEEEEEEECCCCCcccccccccccCCCCCCccccccccccccccccccccCCCCceEEcCCC
Confidence 456788999999984 89999999999765 67899999
Q ss_pred CCCCCCCCCCCCCCCCCCCCCCeEEEEEEeCCCccceeEeCCc----cccccCCceeEEEEecCCCCCCCCCCCCCcceE
Q 011178 40 QQRRNSWQDGVYGTNCPIPPGKNFTYVLQVKDQIGSYFYFPSL----AFHKAAGGYGGIKIASRPLIPVPFDPPAGDFTI 115 (491)
Q Consensus 40 ~~~~~~~~DG~~~~q~~i~PG~~~~Y~f~~~~~~Gt~wYH~H~----~~q~~~Gl~G~liV~~~~~~~~~~~~~~~e~~l 115 (491)
+++ +++||++ ||+|+||++|+|+|++.+++||||||||. +.|+++||+|+|||+++++...+++.+++|++|
T Consensus 136 ~~~--~~~DGv~--q~~I~PG~~~~Y~f~~~q~~GT~WYHsH~~g~t~~q~~~Gl~G~liI~d~~~~~~~~p~~d~e~~l 211 (612)
T 3gyr_A 136 QTG--GGNDGWA--DNAVGFGDAQLSEYPNDHQATQWWYHDHAMNITRWNVMAGLYGTYLVRDDEEDALGLPSGDREIPL 211 (612)
T ss_dssp CCC--TTTSCCG--GGCBCTTCEEEEEECCCSCSEEEEEEECCTTTHHHHTTTTCEEEEEEECHHHHTTTCCCGGGEEEE
T ss_pred ccC--CcccCcc--cCccCCCCCEEEEEEcCCCCceEEEeeCCCCcchhhhhccceeEEEEcCccccccCCCCCCccEEE
Confidence 874 5699986 89999999999999997678999999997 479999999999999977655556677999999
Q ss_pred EeeecccCCHHHHHHH--H-------h--------cCCCCCCCceEEEcCcCCCcceEEEeCCCEEEEEEEEcCCCCeEe
Q 011178 116 LAGDWYKKNHTDLKAI--L-------D--------SGSDLPFPDGLVINGRGSNANTFTVDQGKTYRFRISNVGISTSIN 178 (491)
Q Consensus 116 ~l~d~~~~~~~~~~~~--~-------~--------~~~~~~~~~~~~vNG~~~~~~~~~v~~g~~~rlR~iN~~~~~~~~ 178 (491)
+|+||+++.+.+.... + . .......++.++|||+. .+.+.+++ ++|||||||+|+.+.+.
T Consensus 212 vl~Dw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gd~~~vNG~~--~p~~~v~~-~~yRlRliNas~~~~~~ 288 (612)
T 3gyr_A 212 LIADRNLDTDEDGRLNGRLLHKTVIVQQSNPETGKPVSIPFFGPYTTVNGRI--WPYADVDD-GWYRLRLVNASNARIYN 288 (612)
T ss_dssp EEEEECEEECTTSCEEEEEEEEEEEEESSCSSSSCCEECCCCCSEEEETTEE--SCEEEEES-SEEEEEEEECCSSCCEE
T ss_pred EEEEEecccccccccccccccCCccccccCCCCCCccccCccCceeeecCCc--cceEeccC-cEEEEEEEeccCCccee
Confidence 9999998754332100 0 0 00123457899999999 89999976 58999999999999999
Q ss_pred EEEeCc-------eeEEEEecCccC-C------CCccCeEEEcCCceEEEEEEeCCCCcceEEEEEeeccC--------C
Q 011178 179 FRIQGH-------KMLLVEVEGTHT-L------QNTYDSLDIHLGQSYSVLVRADQPPQGYYIVISTRFTS--------Q 236 (491)
Q Consensus 179 ~~i~~~-------~~~via~DG~~~-~------p~~~~~l~l~pGeR~dv~v~~~~~~g~~~i~~~~~~~~--------~ 236 (491)
|+|++| +|+|||+||.++ + |..++.|.|+|||||||+|++++.+|.++......... .
T Consensus 289 l~i~~h~~~~~~~~~~vIa~DG~~l~~Pv~v~~p~~~~~l~i~pGeRydVlV~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 368 (612)
T 3gyr_A 289 LVLIDEDDRPVPGVVHQIGSDGGLLPRPVPVDFDDTLPVLSAAPAERFDLLVDFRALGGRRLRLVDKGPGAPAGTPDPLG 368 (612)
T ss_dssp EEEECTTSCBCTTSEEEEEETTEEEEEEEEECSSSSSSSEEECTTCEEEEEEECTTCTTCEEEEEECCTTSCTTSCBGGG
T ss_pred EEEccCCCccCCceEEEEEeCCCccccceeccCcccccEEEeccceEEEEEEECCCCCceEEEEEecCCcCCcCccCccc
Confidence 999998 499999999887 3 34557899999999999999998766655443322111 0
Q ss_pred CcceEEEEEecCCCCCC--CCCCCCCCCccccchhhhhhhhccCCCCCCCCCCCCCCCCccccccceEEEEecccc--Cc
Q 011178 237 VLSATSVLHYSNSAGSV--SGPPPGGPTTQIDWSLEQARSLRRNLTASGPRPNPQGSYHYGLINTTHTIRLQNTAP--TI 312 (491)
Q Consensus 237 ~~~~~ail~y~~~~~~~--~~~~p~~p~~~~~~~~~~~~~~~~~l~~~~~~~~p~~~~~~~~~~~~~~~~l~~~~~--~~ 312 (491)
......+++|....... ...+|........ .+ ....+ ...+...+..... ..
T Consensus 369 ~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~-----------~~----~~~~~---------~~~~~~~~~~~~~~~~~ 424 (612)
T 3gyr_A 369 GVRYPEVMEFRVRETCEEDSFALPEVLSGSFR-----------RM----SHDIP---------HGHRLIVLTPPGTKGSG 424 (612)
T ss_dssp TBSCCEEEEEEEECCSCCCCCCCCSSCCSSCC-----------CC----CTTSC---------CEEEEEEEECTTCTTTT
T ss_pred cccccceeeecccCCCCCCccccccccccccc-----------cc----ccccc---------ccccccccccccccccc
Confidence 12234566665432211 1111110000000 00 00000 0000111100000 00
Q ss_pred CCeEeEEEcCeeee-CCCCcc---ccccccCC-CCccccCCCCCCCCCCCcceeeeEEeecCCcEEEEEEEcCCCCCCce
Q 011178 313 NGKQRYAVNSVSFI-PADTPL---KLADYFKI-PGVFSVGSIPDNPTGGGAYLQTSVMAADFRGFAEVVFENPEDTLQSW 387 (491)
Q Consensus 313 ~~~~~~~iNg~~f~-~~~~p~---~~~~~~~~-~~~~~~~~~~~~p~~~~~~~~~~~~~~~~g~~v~~~i~N~~~~~HP~ 387 (491)
.....|.++..... ....+. +....... ...+.. ++....+...+.++.|++|+|+|+|.+.+.|||
T Consensus 425 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------n~~~~~~~~~~~~~~g~~~~w~i~N~~~~~HP~ 496 (612)
T 3gyr_A 425 GHPEIWEMAEVEDPADVQVPAEGVIQVTGADGRTKTYRR--------TARTFNDGLGFTIGEGTHEQWTFLNLSPILHPM 496 (612)
T ss_dssp TCCEEEEEEECC-----CCSCTTEEEEECTTSCEEEEEE--------EECSTTSCCCEEEETTCEEEEEEEECSSSCEEE
T ss_pred ccccccccccccccccccccccceeeeccCCCccccccc--------cCccCCCCcceEeCCCCEEEEEEEcCCCCCcCE
Confidence 00111111110000 000000 00000000 000000 001111223467899999999999999999999
Q ss_pred eccCCCeEEEeeccCCCCCCC----------------CCCcccCCCCceeeEEeCCCCEEEEEEE-ccCcceeeeeecch
Q 011178 388 HIDGHNFFAVGMDGGEWTPAS----------------RLTYNLRDTISRCTVQVYPKSWTAVYVP-LDNVGMWNIRSENW 450 (491)
Q Consensus 388 HlHG~~F~Vl~~g~g~~~~~~----------------~~~~~~~~p~~rDTv~v~p~~~~~irf~-adnpG~w~~HCHil 450 (491)
|||||+||||+++.+.+.... ....+..++.|||||.|+++++++|||+ +||||.||||||||
T Consensus 497 HLHG~~F~Vl~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kDTv~v~~~~~v~i~~rfadnpG~w~~HCHil 576 (612)
T 3gyr_A 497 HIHLADFQVLGRDAYDASGFDLALGGTRTPVRLDPDTPVPLAPNELGHKDVFQVPGPQGLRVMGKFDGAYGRFMYHCHLL 576 (612)
T ss_dssp EESSCEEEEEEEEEEECTTEETTTTEESSCEEEEEEEECCCCTTCSSCBSEEEECSSEEEEEEEECCSCCEEEEEEESSH
T ss_pred eECCCcEEEEeecCCcCccccccccccccccccccccccCcccccCCCCcEEEECCCCEEEEEEEeCCCCcceEEcCCCh
Confidence 999999999998654332110 1234567789999999999999999998 69999999999999
Q ss_pred hhhhcceEEEEEEecCCc
Q 011178 451 ARQYLGQQFYLRVYSSAN 468 (491)
Q Consensus 451 ~H~d~GMm~~~~V~~~~~ 468 (491)
+|||.|||+.|+|++|+.
T Consensus 577 ~Hed~GMM~~f~V~~p~~ 594 (612)
T 3gyr_A 577 EHEDMGMMRPFVVMPPEA 594 (612)
T ss_dssp HHHHTTCEEEEEEECHHH
T ss_pred HHHhCcCCcceEEeCCcc
Confidence 999999999999998875
No 16
>3od3_A Blue copper oxidase CUEO; multicopper oxidase, Cu(I) oxidase, oxidoreductase; 1.10A {Escherichia coli} PDB: 1n68_A 2fqd_A* 2fqe_A* 2fqf_A* 2fqg_A* 3nsd_A 1kv7_A 3pau_A 3pav_A 3nsf_A 1pf3_A 3qqx_A 3nsc_A 3nt0_A 3uad_A 3uaa_A 3uac_A 3uab_A 3uae_A 3nsy_A ...
Probab=100.00 E-value=6.3e-76 Score=611.13 Aligned_cols=385 Identities=18% Similarity=0.208 Sum_probs=283.9
Q ss_pred CCCcccCCCCeEEEe--eeEEEEEEecCCCCCeeeecccCCCCCCCCCCCCCCCCCCCCCCeEEEEEEeCCCccceeEeC
Q 011178 3 WMNHFSSLGCSLITH--LYTHLVVLNFIYMAPLITLNGVQQRRNSWQDGVYGTNCPIPPGKNFTYVLQVKDQIGSYFYFP 80 (491)
Q Consensus 3 ~~~~~~~~G~~l~v~--d~v~i~~~N~l~~~~siH~HG~~~~~~~~~DG~~~~q~~i~PG~~~~Y~f~~~~~~Gt~wYH~ 80 (491)
|-.++..+||+|++. |+|+|+|+|+|+++|+|||||+++++ ++||++ ||+|+||++|+|+|++.+++|||||||
T Consensus 39 ~~~NG~~pGP~i~~~~Gd~v~v~~~N~l~~~tsiHwHG~~~~~--~~DG~p--~~~i~PG~~~~Y~f~~~~~aGT~wYH~ 114 (488)
T 3od3_A 39 WGYNGNLLGPAVKLQRGKAVTVDIYNQLTEETTLHWHGLEVPG--EVDGGP--QGIIPPGGKRSVTLNVDQPAATCWFHP 114 (488)
T ss_dssp EEESSSSBCCEEEEETTCEEEEEEEECSSSCBCCEEETCCCCH--HHHCCT--TCCBCTTCEEEEEEECCSCSEEEEEEC
T ss_pred EEECCcCCCCeEEEeCCeEEEEEEEeCCcCceeEeecccccCc--ccCCCC--cCcCcCCCeEEEEEecCCCceeEEEEe
Confidence 445778899999985 89999999999999999999999854 699997 899999999999999975689999999
Q ss_pred Cc----cccccCCceeEEEEecCCCCCCCCCC--CCCcceEEeeecccCCHHHHHH---HHhcCCCCCCCceEEEcCcCC
Q 011178 81 SL----AFHKAAGGYGGIKIASRPLIPVPFDP--PAGDFTILAGDWYKKNHTDLKA---ILDSGSDLPFPDGLVINGRGS 151 (491)
Q Consensus 81 H~----~~q~~~Gl~G~liV~~~~~~~~~~~~--~~~e~~l~l~d~~~~~~~~~~~---~~~~~~~~~~~~~~~vNG~~~ 151 (491)
|. +.|+++||+|+|||+++++...+++. .++|++|+|+||+++.++++.. ... ......+|.++|||+.
T Consensus 115 H~~~~t~~q~~~GL~G~liV~~~~~~~~~lp~~y~~~d~~lvl~D~~~~~~g~~~~~~~~~~-~~~g~~gd~~lvNG~~- 192 (488)
T 3od3_A 115 HQHGKTGRQVAMGLAGLVVIEDDEILKLMLPKQWGIDDVPVIVQDKKFSADGQIDYQLDVMT-AAVGWFGDTLLTNGAI- 192 (488)
T ss_dssp CCTTTHHHHHHTTCCEEEEEECHHHHTTCCCCCBTTTEEEEEEEEECBCTTSSBCCCCSHHH-HHHCCCCSEEEETTBS-
T ss_pred cCCCcchhhhhccceeEEEEcCccccccCCcccCCccceeEEEEEeeecCCCceeccccccc-cccCCCCCEEEEcCCc-
Confidence 97 47999999999999997643333332 3569999999999976543210 000 0123467999999999
Q ss_pred CcceEEEeCCCEEEEEEEEcCCCCeEeEEE-eCceeEEEEecCccC-CCCccCeEEEcCCceEEEEEEeCCCCcceEEEE
Q 011178 152 NANTFTVDQGKTYRFRISNVGISTSINFRI-QGHKMLLVEVEGTHT-LQNTYDSLDIHLGQSYSVLVRADQPPQGYYIVI 229 (491)
Q Consensus 152 ~~~~~~v~~g~~~rlR~iN~~~~~~~~~~i-~~~~~~via~DG~~~-~p~~~~~l~l~pGeR~dv~v~~~~~~g~~~i~~ 229 (491)
.|.+.+ +|++|||||||+|+.+.+.|+| +||+|+|||+||.++ +|..+++|.|+|||||||+|++++ .+.|.|++
T Consensus 193 -~p~~~v-~g~~~RlRliNas~~~~~~l~i~dg~~~~vIa~DG~~l~~P~~~~~l~l~pGeR~dvlv~~~~-~~~~~l~~ 269 (488)
T 3od3_A 193 -YPQHAA-PRGWLRLRLLNGCNARSLNFATSDNRPLYVIASDGGLLPEPVKVSELPVLMGERFEVLVEVND-NKPFDLVT 269 (488)
T ss_dssp -SCEEEE-EEEEEEEEEEECCSSCCEEEEETTCCCEEEEEETTEEEEEEEEESCEEECTTCEEEEEEEECT-TCCEEEEE
T ss_pred -CccEec-CCCEEEEEEEccCCCceeeeeecCCCeEEEEEeCCCcccCccEeceEEECCCCEEEEEEEeCC-CceEEEEE
Confidence 788877 5689999999999999999999 699999999999986 899999999999999999999994 67899987
Q ss_pred EeeccCC-----CcceEEEEEecCCCCCCCCCCCCCCCccccchhhhhhhhccCCCCCCCCCCCCCCCCccccccceEEE
Q 011178 230 STRFTSQ-----VLSATSVLHYSNSAGSVSGPPPGGPTTQIDWSLEQARSLRRNLTASGPRPNPQGSYHYGLINTTHTIR 304 (491)
Q Consensus 230 ~~~~~~~-----~~~~~ail~y~~~~~~~~~~~p~~p~~~~~~~~~~~~~~~~~l~~~~~~~~p~~~~~~~~~~~~~~~~ 304 (491)
....... ......+++......+....+|. .|....+. |. .....+|++.
T Consensus 270 ~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~P~------------------~L~~~~~~--~~-----~~~~~~r~~~ 324 (488)
T 3od3_A 270 LPVSQMGMAIAPFDKPHPVMRIQPIAISASGALPD------------------TLSSLPAL--PS-----LEGLTVRKLQ 324 (488)
T ss_dssp CCCSSTTTTSTTTTSCEEEEEEEEEEEECCCCCCS------------------CCCCCCCC--CC-----CTTCCEEEEE
T ss_pred eccCCCCcccccccCccceeEecccccCCCCCCCc------------------ccccCCCC--cc-----cccccceEEE
Confidence 5432110 01122233332211001111111 01110000 00 0012345555
Q ss_pred Eeccc-------------------cCc----------CCe-------------EeEEEcCeeeeCCCCccccccccCCCC
Q 011178 305 LQNTA-------------------PTI----------NGK-------------QRYAVNSVSFIPADTPLKLADYFKIPG 342 (491)
Q Consensus 305 l~~~~-------------------~~~----------~~~-------------~~~~iNg~~f~~~~~p~~~~~~~~~~~ 342 (491)
+.... ... .+. ..|+|||++|.. +.|
T Consensus 325 l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~g~~~~~~~~~~ING~~~~~-~~~----------- 392 (488)
T 3od3_A 325 LSMDPMLDMMGMQMLMEKYGDQAMAGMDHSQMMGHMGHGNMNHMNHGGKFDFHHANKINGQAFDM-NKP----------- 392 (488)
T ss_dssp EEECHHHHHHHHHHHHHHHGGGGGTTSCHHHHCCCSCCCCCCCSCCCGGGCGGGCEEETTBCCCT-TCC-----------
T ss_pred EEecccccccccccccccccccccccccccccccccccCccccccccccccccceeeECCeeCCC-CCC-----------
Confidence 53200 000 110 138999999852 112
Q ss_pred ccccCCCCCCCCCCCcceeeeEEeecCCcEEEEEEEcCC-CCCCceeccCCCeEEEeeccCCCCCCCCCCcccCCCCcee
Q 011178 343 VFSVGSIPDNPTGGGAYLQTSVMAADFRGFAEVVFENPE-DTLQSWHIDGHNFFAVGMDGGEWTPASRLTYNLRDTISRC 421 (491)
Q Consensus 343 ~~~~~~~~~~p~~~~~~~~~~~~~~~~g~~v~~~i~N~~-~~~HP~HlHG~~F~Vl~~g~g~~~~~~~~~~~~~~p~~rD 421 (491)
.+.++.|++|+|+|.|.+ .+.|||||||++|+|+++++... ...++.|||
T Consensus 393 ---------------------~~~~~~G~~e~w~l~N~~~~~~Hp~HlHg~~F~Vl~~~g~~~--------~~~~~~~kD 443 (488)
T 3od3_A 393 ---------------------MFAAAKGQYERWVISGVGDMMLHPFHIHGTQFRILSENGKPP--------AAHRAGWKD 443 (488)
T ss_dssp ---------------------SEECCBSSCEEEEEECTTCCCCEEEEETTCCBEEEEBTTBCC--------CGGGSSSBS
T ss_pred ---------------------ceEcCCCCEEEEEEEeCCCCCCccEEEcCceEEEeccCCCcc--------ccccCCcee
Confidence 146788999999999988 57899999999999999964322 123457999
Q ss_pred eEEeCCCCEEEEEEEcc----CcceeeeeecchhhhhcceEEEEEE
Q 011178 422 TVQVYPKSWTAVYVPLD----NVGMWNIRSENWARQYLGQQFYLRV 463 (491)
Q Consensus 422 Tv~v~p~~~~~irf~ad----npG~w~~HCHil~H~d~GMm~~~~V 463 (491)
||.|+ +++++|+|+++ +||.||||||||+|||.|||..|+|
T Consensus 444 TV~v~-g~~~~i~~~f~~~~~~~G~~m~HCH~l~Hed~GMm~~f~V 488 (488)
T 3od3_A 444 TVKVE-GNVSEVLVKFNHDAPKEHAYMAHCHLLEHEDTGMMLGFTV 488 (488)
T ss_dssp EEEES-SSEEEEEECBCSCCCGGGCEEEEESSHHHHHTTCEEEEEC
T ss_pred EEEeC-CCEEEEEEEeccCCCCCCCEEEeCCchHHHhcCCcEEEEC
Confidence 99999 99999999974 5789999999999999999999986
No 17
>2g23_A PHS, phenoxazinone synthase; copper, metalloprotein, laccase, multicopper oxidase, hexamer; 2.30A {Streptomyces antibioticus} PDB: 3gyr_A
Probab=100.00 E-value=4.7e-75 Score=619.17 Aligned_cols=414 Identities=15% Similarity=0.141 Sum_probs=293.4
Q ss_pred CCCcccCCCCeEEEe--eeEEEEEEecCCCC-----------------------------------------Ceeeeccc
Q 011178 3 WMNHFSSLGCSLITH--LYTHLVVLNFIYMA-----------------------------------------PLITLNGV 39 (491)
Q Consensus 3 ~~~~~~~~G~~l~v~--d~v~i~~~N~l~~~-----------------------------------------~siH~HG~ 39 (491)
|-.++..+||||++. |+|+|+++|+|+++ |+|||||+
T Consensus 56 ~~ynG~~PGPtI~~~~Gd~v~V~~~N~L~~~~~~~~~~~~~p~~~~g~p~~~~~p~~~g~~~~~~~~~~~~~tsiH~HG~ 135 (612)
T 2g23_A 56 WGYDGQVPGPTIEVRRGQRVRIAWTNRIPKGSEYPVTSVEVPLGPPGTPAPNTEPGRGGVEPNKDVAALPAWSVTHLHGA 135 (612)
T ss_dssp EEETTBSSCCEEEEETTCCEEEEEEECCCTTCCCSEEEEEECCCSTTSCCGGGSCSCTTCCCCHHHHTCCCCBCEEEETC
T ss_pred EEECCccCCceEEEECCeEeeEEEEECcCCcccccccccccccccCCCcccccccccccccccccccccCCceEEEcCCC
Confidence 445678899999985 89999999999853 89999999
Q ss_pred CCCCCCCCCCCCCCCCCCCCCCeEEEEEEeCCCccceeEeCCcc----ccccCCceeEEEEecCCCCCCCCCCCCCcceE
Q 011178 40 QQRRNSWQDGVYGTNCPIPPGKNFTYVLQVKDQIGSYFYFPSLA----FHKAAGGYGGIKIASRPLIPVPFDPPAGDFTI 115 (491)
Q Consensus 40 ~~~~~~~~DG~~~~q~~i~PG~~~~Y~f~~~~~~Gt~wYH~H~~----~q~~~Gl~G~liV~~~~~~~~~~~~~~~e~~l 115 (491)
++.+. +||++ ||+|+||++|+|+|++.+++||||||||.+ .|+++||+|+|||+++++...+++.+|+|++|
T Consensus 136 ~~~~~--~DG~p--~~~i~PG~s~~Y~f~~~~~aGT~wYH~H~~~~t~~q~~~GL~G~liV~~~~~~~~~lp~~d~d~~l 211 (612)
T 2g23_A 136 QTGGG--NDGWA--DNAVGFGDAQLSEYPNDHQATQWWYHDHAMNITRWNVMAGLYGTYLVRDDEEDALGLPSGDREIPL 211 (612)
T ss_dssp CCCTT--TSCCG--GGCBCTTCEEEEEECCCSCSCEEEEEECCTTTHHHHTTTTCEEEEEEECHHHHTTTCCCGGGEEEE
T ss_pred CCCCc--cCCCC--cCCCCCCCeEEEEEEecCCCceEEEecccCCcchhhhhccceeEEEEcCcccccccCCCCcceEEE
Confidence 98654 99986 899999999999999976899999999986 49999999999999976544555567999999
Q ss_pred EeeecccCCHHH--HH-HH------Hhc---C-C----CCCCCceEEEcCcCCCcceEEEeCCCEEEEEEEEcCCCCeEe
Q 011178 116 LAGDWYKKNHTD--LK-AI------LDS---G-S----DLPFPDGLVINGRGSNANTFTVDQGKTYRFRISNVGISTSIN 178 (491)
Q Consensus 116 ~l~d~~~~~~~~--~~-~~------~~~---~-~----~~~~~~~~~vNG~~~~~~~~~v~~g~~~rlR~iN~~~~~~~~ 178 (491)
+|+||+++.+.+ +. .. +.. + . .+..+|.++|||+. .|.++|++| +|||||||+|+.+.+.
T Consensus 212 ~l~Dw~~~~~~~~~~~~~l~~~~~~~~~~~~~~g~p~~~~~~gd~~lVNG~~--~p~~~V~~g-~yRlRliNas~~r~~~ 288 (612)
T 2g23_A 212 LIADRNLDTDEDGRLNGRLLHKTVIVQQSNPETGKPVSIPFFGPYTTVNGRI--WPYADVDDG-WYRLRLVNASNARIYN 288 (612)
T ss_dssp EEEEECEEECTTSCEEEEEEEEEEEEESSCSSSSCCEECCCCCSEEEETTEE--SCEEEEESS-EEEEEEEECCSSCCEE
T ss_pred EEEEEeccCCcccccccccccccccccccccccCcccccCCcCCEEEECCcc--CCeEEecCC-eEEEEEEecCCCeEEE
Confidence 999999985421 10 00 000 0 0 12468999999999 899999999 9999999999999999
Q ss_pred EEEeCc-------eeEEEEecCccC-CCCccC------eEEEcCCceEEEEEEeCCCCc-ceEEEEEeeccCC-------
Q 011178 179 FRIQGH-------KMLLVEVEGTHT-LQNTYD------SLDIHLGQSYSVLVRADQPPQ-GYYIVISTRFTSQ------- 236 (491)
Q Consensus 179 ~~i~~~-------~~~via~DG~~~-~p~~~~------~l~l~pGeR~dv~v~~~~~~g-~~~i~~~~~~~~~------- 236 (491)
|+|++| +|+|||+||.++ +|+.++ +|.|+|||||||+|++++.+| +|+|++.......
T Consensus 289 l~i~~h~g~~~~~~~~vIa~DG~~l~~P~~~~~~~~~~~l~l~pgeR~dvlVd~~~~~g~~~~L~~~~~~~~~g~~~~~~ 368 (612)
T 2g23_A 289 LVLIDEDDRPVPGVVHQIGSDGGLLPRPVPVDFDDTLPVLSAAPAERFDLLVDFRALGGRRLRLVDKGPGAPAGTPDPLG 368 (612)
T ss_dssp EEEECTTSCBCTTSEEEEEETTEEEEEEEEECSSSSSSSEEECTTCEEEEEEECTTCTTCEEEEEECCTTSCTTSCBGGG
T ss_pred EEEcCCCCccCCCcEEEEEeCCeEccCCEEecccCcccEEEECCcCeEEEEEECCCCCCCEEEEEeCCccCCCCcccccc
Confidence 999999 899999999999 588888 999999999999999998666 4888775421110
Q ss_pred CcceEEEEEecCCCCC--CCCCCCCC--CC-ccccchhhhhhhhccCCCCCCCCCCCCCCCCccccccceEEEEeccc--
Q 011178 237 VLSATSVLHYSNSAGS--VSGPPPGG--PT-TQIDWSLEQARSLRRNLTASGPRPNPQGSYHYGLINTTHTIRLQNTA-- 309 (491)
Q Consensus 237 ~~~~~ail~y~~~~~~--~~~~~p~~--p~-~~~~~~~~~~~~~~~~l~~~~~~~~p~~~~~~~~~~~~~~~~l~~~~-- 309 (491)
......++++...... ....+|.. +. ..+.........+.. +.. +... +.....+.+.+....
T Consensus 369 ~~~~~~vm~f~V~~~~~~~~~~~P~~L~~~~~~l~~~~~~~~r~~~-~~~----~~~~-----~~~~~~~~~~~~~~~~~ 438 (612)
T 2g23_A 369 GVRYPEVMEFRVRETCEEDSFALPEVLSGSFRRMSHDIPHGHRLIV-LTP----PGTK-----GSGGHPEIWEMAEVEDP 438 (612)
T ss_dssp TBSCCEEEEEEEECCSCCCCCCCCSSCCSSCCCCCTTSCCEEEEEE-ECC----TTCT-----TSTTCCCEEEEEEEC--
T ss_pred CccccceEEEEEccCCCCCCCCCChhhccccccCCcccccceeEEe-ecc----cccc-----ccccccceeeccccccc
Confidence 0011235655533211 11122210 00 000000000000000 000 0000 000000111111000
Q ss_pred -------------cCcCC-eEeEEEcCeeeeCCCCccccccccCCCCccccCCCCCCCCCCCcceeeeEEeecCCcEEEE
Q 011178 310 -------------PTING-KQRYAVNSVSFIPADTPLKLADYFKIPGVFSVGSIPDNPTGGGAYLQTSVMAADFRGFAEV 375 (491)
Q Consensus 310 -------------~~~~~-~~~~~iNg~~f~~~~~p~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~g~~v~~ 375 (491)
...+| ...|.|||+.|.+ ...+.++.|++|+|
T Consensus 439 ~~~~~~~~~~~~~~~~~g~~~~~~iNG~~~~~----------------------------------~~~~~v~~G~~v~w 484 (612)
T 2g23_A 439 ADVQVPAEGVIQVTGADGRTKTYRRTAATFND----------------------------------GLGFTIGEGTHEQW 484 (612)
T ss_dssp ---CCSCTTEEEEECTTSCEEEEEEEECSTTS----------------------------------CCCEEEETTCEEEE
T ss_pred cccccccccceeeeccCCceeEEEECCccCCC----------------------------------CCceEecCCCEEEE
Confidence 00112 2457777776642 11256789999999
Q ss_pred EEEcCCCCCCceeccCCCeEEEeeccCCCCCCC----------------CCCcccCCCCceeeEEeCCCCEEEEEEEcc-
Q 011178 376 VFENPEDTLQSWHIDGHNFFAVGMDGGEWTPAS----------------RLTYNLRDTISRCTVQVYPKSWTAVYVPLD- 438 (491)
Q Consensus 376 ~i~N~~~~~HP~HlHG~~F~Vl~~g~g~~~~~~----------------~~~~~~~~p~~rDTv~v~p~~~~~irf~ad- 438 (491)
+|.|.+.+.|||||||+.|+|++++.+.++..+ ....+..++.|||||.|+|+++++|+|+|+
T Consensus 485 ~l~N~~~~~HPiHlHg~~F~Vl~r~~~~~~~~~~~~~g~~~~~~~~~g~~~~~~~~e~~~kDTv~v~Pg~~~~i~~~~~~ 564 (612)
T 2g23_A 485 TFLNLSPILHPMHIHLADFQVLGRDAYDASGFDLALGGTRTPVRLDPDTPVPLAPNELGHKDVFQVPGPQGLRVMGKFDG 564 (612)
T ss_dssp EEEECSSSCEEEEESSCCEEEEEEEEEECTTEETTTTEESSCEEEEEEEECCCCTTSSSCBSEEEECSSEEEEEEEECCS
T ss_pred EEEeCCCCCCCeEEcCceEEEecccCcccccccccccCcccccccccccccCCCcccccccCeEEECCCcEEEEEEEeCC
Confidence 999999899999999999999998643221100 012345567899999999999999999998
Q ss_pred CcceeeeeecchhhhhcceEEEEEEecCC
Q 011178 439 NVGMWNIRSENWARQYLGQQFYLRVYSSA 467 (491)
Q Consensus 439 npG~w~~HCHil~H~d~GMm~~~~V~~~~ 467 (491)
|||.|||||||++|+|.|||..|+|.+.+
T Consensus 565 ~pG~w~~HCHil~Hed~GMm~~f~V~p~~ 593 (612)
T 2g23_A 565 AYGRFMYHCHLLEHEDMGMMRPFVVMPPE 593 (612)
T ss_dssp CCEEEEEEESSHHHHTTTCEEEEEEECHH
T ss_pred CCccEEEEeCchhHhhcCCceEEEECchh
Confidence 99999999999999999999999997654
No 18
>2r7e_A Coagulation factor VIII; ceruloplasmin fold, cupper protein fold, C2 domain fold, ACU blood coagulation, disease mutation, glycoprotein; HET: NAG BMA MAN; 3.70A {Homo sapiens} PDB: 3cdz_A*
Probab=100.00 E-value=1e-53 Score=466.55 Aligned_cols=217 Identities=16% Similarity=0.188 Sum_probs=166.5
Q ss_pred ccCCCCeEEE--eeeEEEEEEecCCCCCeeeecccCCC----CCCCCCCCC---CCCCCCCCCCeEEEEEEeCC------
Q 011178 7 FSSLGCSLIT--HLYTHLVVLNFIYMAPLITLNGVQQR----RNSWQDGVY---GTNCPIPPGKNFTYVLQVKD------ 71 (491)
Q Consensus 7 ~~~~G~~l~v--~d~v~i~~~N~l~~~~siH~HG~~~~----~~~~~DG~~---~~q~~i~PG~~~~Y~f~~~~------ 71 (491)
...+||+||+ ||+|+|+|+|+|++++||||||++++ +.+++||++ .+||+|+||++|+|+|++++
T Consensus 70 ~~~pGP~Ir~~~GD~v~V~v~N~l~~~tsIHwHGl~~~~~~DG~p~~Dg~~~~~vtq~~I~PG~s~tY~f~v~~~~gP~~ 149 (742)
T 2r7e_A 70 MGLLGPTIQAEVYDTVVITLKNMASHPVSLHAVGVSYWKASEGAEYDDQTSQREKEDDKVFPGGSHTYVWQVLKENGPMA 149 (742)
T ss_dssp TTTSEEEEEECSEEEEECCEECCSSSCCCCCCSSSCCCSSSSCCCSSCSCCSSSSSSSSCCTTCEECCEEEECGGGSCCS
T ss_pred cCCcCCeEEEECCCEEEEEEEECCCCCEeEEecCcccCccccCCccCCCCcccccccCcCCCCCeEEEEEEeccccCCCc
Confidence 3678999987 58999999999999999999999975 455666665 38999999999999999853
Q ss_pred ---CccceeEeCCccc--cccCCceeEEEEecCCCCCCCCCCCCCcceEEeee------cccCCHHHHHHHHhcCCCCCC
Q 011178 72 ---QIGSYFYFPSLAF--HKAAGGYGGIKIASRPLIPVPFDPPAGDFTILAGD------WYKKNHTDLKAILDSGSDLPF 140 (491)
Q Consensus 72 ---~~Gt~wYH~H~~~--q~~~Gl~G~liV~~~~~~~~~~~~~~~e~~l~l~d------~~~~~~~~~~~~~~~~~~~~~ 140 (491)
++||||||||.+. |+++||+|+|||++++..........+|++|++++ |+++........+........
T Consensus 150 ~d~~~GT~wYHsH~~~~~q~~~GL~G~lIV~~~~~~~~~~~~~~~e~~l~~~~~de~~~w~~~~~~~~~~~~~~~~~~~~ 229 (742)
T 2r7e_A 150 SDPLCLTYSYLSHVDLVKDLNSGLIGALLVCREGSLAKEKTQTLHKFILLFAVFDEGKSWHSETKNSLMQDRDAASARAW 229 (742)
T ss_dssp SSCSSCCEEECCCSCSHHHHHHHCCEEEEECSSSCTTTTTTTCCCEECCCEECCCCSSSSCCCCCC-------CCSCCCC
T ss_pred CCCCcEEEEEccCCChHHHhhCCcEEEEEEecCcccCcccCceeeEEEEEeecccCCccccccccccccccCCCcccccc
Confidence 4699999999985 89999999999999764321111124888888864 444432111001111112223
Q ss_pred CceEEEcCcCC-CcceEEEeCCCEEEEEEEEcCCCC-eEeEEEeCceeEEEEecCccCCCCccCeEEEcCCceEEEEEEe
Q 011178 141 PDGLVINGRGS-NANTFTVDQGKTYRFRISNVGIST-SINFRIQGHKMLLVEVEGTHTLQNTYDSLDIHLGQSYSVLVRA 218 (491)
Q Consensus 141 ~~~~~vNG~~~-~~~~~~v~~g~~~rlR~iN~~~~~-~~~~~i~~~~~~via~DG~~~~p~~~~~l~l~pGeR~dv~v~~ 218 (491)
++.++|||+.. ..+.+++++|++|||||+|++... .+.|+|+||.|+|++. ..|++.|.|||++++++++
T Consensus 230 ~~~~~ING~~~~~~~~l~v~~Ge~vrlrliN~g~~~~~h~~hlhGh~f~Vvg~--------~~Dtv~v~Pg~~~~v~~~~ 301 (742)
T 2r7e_A 230 PKMHTVNGYVNRSLPGLIGCHRKSVYWHVIGMGTTPEVHSIFLEGHTFLVRNH--------RQASLEISPITFLTAQTLL 301 (742)
T ss_dssp CCCCEETTBCTBCCCCCEECSSSCEEEECCCCCSSSCCCCCCCTTCCCEETTE--------ECCSCCCCTTCCCEEEECC
T ss_pred CceEEECCccCCCCcceEEcCCCEEEEEEEeCCCCCcceEEEECCCEEEEEeE--------ecceEEeCCCcEEEEEEEe
Confidence 56789999974 347899999999999999999864 7999999999999743 3578889999999999999
Q ss_pred CCCCcceEEEEEee
Q 011178 219 DQPPQGYYIVISTR 232 (491)
Q Consensus 219 ~~~~g~~~i~~~~~ 232 (491)
+ .+|.|.+.++..
T Consensus 302 ~-~pG~w~~hCH~~ 314 (742)
T 2r7e_A 302 M-DLGQFLLFCHIS 314 (742)
T ss_dssp C-SCSEECCCCCSS
T ss_pred C-CCeeEEEEeCCh
Confidence 8 589988877653
No 19
>2j5w_A Ceruloplasmin, ferroxidase; oxidoreductase, plasma protein, copper transport, copper, transport, polymorphism, glycoprotein, multi-copper oxidase; HET: NAG; 2.80A {Homo sapiens} SCOP: b.6.1.3 b.6.1.3 b.6.1.3 b.6.1.3 b.6.1.3 PDB: 1kcw_A*
Probab=100.00 E-value=2.1e-51 Score=465.64 Aligned_cols=355 Identities=14% Similarity=0.161 Sum_probs=245.4
Q ss_pred cCCCCeEEE--eeeEEEEEEecCCCCCeeeecccCCC----CCCCCCCCCC---CCCCCCCCCeEEEEEEeCCC------
Q 011178 8 SSLGCSLIT--HLYTHLVVLNFIYMAPLITLNGVQQR----RNSWQDGVYG---TNCPIPPGKNFTYVLQVKDQ------ 72 (491)
Q Consensus 8 ~~~G~~l~v--~d~v~i~~~N~l~~~~siH~HG~~~~----~~~~~DG~~~---~q~~i~PG~~~~Y~f~~~~~------ 72 (491)
..|||+||+ ||+|+|+|+|+|++++||||||++++ +.+|+||+++ +||+|+||++|+|+|+++++
T Consensus 91 ~~PGP~Ir~~~GD~v~v~v~N~l~~~tsiHwHGl~~~~~~DG~~~~dg~~g~~~t~~~I~PG~t~tY~f~~~~~~gp~~~ 170 (1065)
T 2j5w_A 91 GFLGPIIKAETGDKVYVHLKNLASRPYTFHSHGITYYKEHEGAIYPDNTTDFQRADDKVYPGEQYTYMLLATEEQSPGEG 170 (1065)
T ss_dssp TTSCCCEEEETTCEEEEEEEEESSSCBCCEESSSBCCGGGCCCCSCCCCCGGGTGGGCBCTTCEEEEEEECCSTTSCCTT
T ss_pred CCcCCeEEEeCCeEEEEEEEECCCCCeeEEeCCccCCcccCCcccCCCCCcccccccccCCCCEEEEEEEeccccCCccC
Confidence 478888887 48889999999999999999999987 5678888874 79999999999999999754
Q ss_pred ---ccceeEeCCcc--ccccCCceeEEEEecCCCCCCCCC-CCCCcceEEee------ecccCCHHHHHHHH-hcCCC--
Q 011178 73 ---IGSYFYFPSLA--FHKAAGGYGGIKIASRPLIPVPFD-PPAGDFTILAG------DWYKKNHTDLKAIL-DSGSD-- 137 (491)
Q Consensus 73 ---~Gt~wYH~H~~--~q~~~Gl~G~liV~~~~~~~~~~~-~~~~e~~l~l~------d~~~~~~~~~~~~~-~~~~~-- 137 (491)
+||||||||.+ .|+++||+|+|||++++....+.+ .+|+|++|+|+ ||++... +..+. +.+..
T Consensus 171 d~~aGT~wYHsH~~~~~qv~~GL~G~lIV~~~~~~~~p~~~~~d~e~~l~l~d~d~~~~w~~~~~--~~~~~~~p~~~~~ 248 (1065)
T 2j5w_A 171 DGNCVTRIYHSHIDAPKDIASGLIGPLIICKKDSLDKEKEKHIDREFVVMFSVVDENFSWYLEDN--IKTYCSEPEKVDK 248 (1065)
T ss_dssp SCSEEEEEEECCSSHHHHHHHTCEEEEEEECTTCBSSSSBTTCCEEEEEEEEEEEGGGSTTHHHH--HHHHCSCGGGCCT
T ss_pred CCCceEEEEEeccCchhHhhCccEEEEEEecCcccCCCccCCCccceEEEeeeecCCccccccch--hhhhhcCcccccc
Confidence 59999999998 467899999999999865333322 45889999999 4554422 11111 11100
Q ss_pred --C---CCCceEEEcCcCC-CcceEEEeCCCEEEEEEEEcCCC-CeEeEEEeCceeEEEEecCccCCCCccCeEEEcCCc
Q 011178 138 --L---PFPDGLVINGRGS-NANTFTVDQGKTYRFRISNVGIS-TSINFRIQGHKMLLVEVEGTHTLQNTYDSLDIHLGQ 210 (491)
Q Consensus 138 --~---~~~~~~~vNG~~~-~~~~~~v~~g~~~rlR~iN~~~~-~~~~~~i~~~~~~via~DG~~~~p~~~~~l~l~pGe 210 (491)
. ..++.++|||+.. ..+.+++++|++|||||||+|.. ..+.|+|+||.|++ +|..++++.|+|||
T Consensus 249 ~~~~~~~~~~~~~iNG~~~~~~~~l~v~~Ge~vRlRliNag~~~~~~~~~i~Gh~f~v--------~p~~~dtv~I~pGe 320 (1065)
T 2j5w_A 249 DNEDFQQSNRMYSVNGYTFGSLSGLSMCAEDRVKWYLFGMGNEVDVHAAFFHGQALTN--------KNYRIDTINLFPAT 320 (1065)
T ss_dssp TCHHHHHHTEEEEETTEETTCCCCCEEETTCEEEEEEEECSSTTCCEEEEETTCCEEE--------TTEEESEEEECBTC
T ss_pred ccccccccCcEEEECCccCCCCcceEECCCCEEEEEEEcCCcccceeEEEEcCCEEEE--------CCeeecEEEECCCc
Confidence 0 0235799999974 24789999999999999999976 68999999999993 56788999999999
Q ss_pred eEEEEEEeCCCCcceEEEEEeeccCCCcceEEEEEecCCCCCCCCCCCCCCCccccchhhhhhhhccCCCCCCC------
Q 011178 211 SYSVLVRADQPPQGYYIVISTRFTSQVLSATSVLHYSNSAGSVSGPPPGGPTTQIDWSLEQARSLRRNLTASGP------ 284 (491)
Q Consensus 211 R~dv~v~~~~~~g~~~i~~~~~~~~~~~~~~ail~y~~~~~~~~~~~p~~p~~~~~~~~~~~~~~~~~l~~~~~------ 284 (491)
||||+|++++ +|.|+|.++..... .....+.++|.+.....+.+.|..+. ...+ +..++.+.|++.+...
T Consensus 321 r~dVlv~~~~-pG~y~i~~h~~~h~-~~Gm~~~~~V~~~~~~~~~~~~~g~~-~~~~-~i~A~e~~wdy~~~~~~~~~~~ 396 (1065)
T 2j5w_A 321 LFDAYMVAQN-PGEWMLSCQNLNHL-KAGLQAFFQVQECNKSSSKDNIRGKH-VRHY-YIAAEEIIWNYAPSGIDIFTKE 396 (1065)
T ss_dssp EEEEEEECCS-CEEEEEEECSHHHH-HTTCEEEEEEECSCCCCCCCCCTTSE-EEEE-EEEEEEEEEESCTTSBCTTTCC
T ss_pred EEEEEEEeCC-CeeEEEEecCcchh-hCCCEEEEEEecCCCccccccccccc-eeEE-EEeceecccccCCCCccccccc
Confidence 9999999995 89999998865321 12467888887655433333332210 1111 3345667777765432
Q ss_pred CCCCCCCCCccccccceEEEEeccccCcCCeEeEEEcCeeeeCCCCccccccccCCCCccccCCCCCCCCCCCcceeeeE
Q 011178 285 RPNPQGSYHYGLINTTHTIRLQNTAPTINGKQRYAVNSVSFIPADTPLKLADYFKIPGVFSVGSIPDNPTGGGAYLQTSV 364 (491)
Q Consensus 285 ~~~p~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~iNg~~f~~~~~p~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~ 364 (491)
.+++++++ ...+ |.......+++++-.++ ++|.+ +.|+.+. ...|..........+
T Consensus 397 ~~~~~~s~-------~~~~-l~~~~~~ig~~y~k~v~-~~y~d--------------~~f~~~~-~~~~~~~~~g~lgpv 452 (1065)
T 2j5w_A 397 NLTAPGSD-------SAVF-FEQGTTRIGGSYKKLVY-REYTD--------------ASFTNRK-ERGPEEEHLGILGPV 452 (1065)
T ss_dssp BTTCTTCT-------THHH-HCCBTTBCCSEEEEEEE-EEESS--------------TTCCSBC-CCCGGGGGGTTSCCC
T ss_pred ccCCCccc-------chhh-hccCCcccCceEeeeee-ecccC--------------CceEEcC-cCCcccccccccCce
Confidence 22333321 1112 22222233445555555 45532 2222110 001110011112467
Q ss_pred EeecCCcEEEEEEEcCCCCCCceeccCCCeEEEeec
Q 011178 365 MAADFRGFAEVVFENPEDTLQSWHIDGHNFFAVGMD 400 (491)
Q Consensus 365 ~~~~~g~~v~~~i~N~~~~~HP~HlHG~~F~Vl~~g 400 (491)
+.++.|++++++|.|....+|+||+||+.|++++.|
T Consensus 453 i~a~~gd~i~i~f~N~~~~~~s~h~hG~~f~~~~~g 488 (1065)
T 2j5w_A 453 IWAEVGDTIRVTFHNKGAYPLSIEPIGVRFNKNNEG 488 (1065)
T ss_dssp EEEETTEEEEEEEEECSSSCBCCEEESSBCCGGGCS
T ss_pred EEEeCCCEEEEEEEECCCCCccCcccceeeeccCCC
Confidence 899999999999999999999999999999977653
No 20
>3g5w_A Multicopper oxidase type 1; two domain, laccase, nitrifier, metal B protein; 1.90A {Nitrosomonas europaea}
Probab=100.00 E-value=1.2e-46 Score=373.49 Aligned_cols=241 Identities=19% Similarity=0.258 Sum_probs=197.7
Q ss_pred CCCcccCCCCeEEEe--eeEEEEEEecCCCCCeeeecccCCCCCCCCCCCCC-CCCCCCCCCeEEEEEEeCCCccceeEe
Q 011178 3 WMNHFSSLGCSLITH--LYTHLVVLNFIYMAPLITLNGVQQRRNSWQDGVYG-TNCPIPPGKNFTYVLQVKDQIGSYFYF 79 (491)
Q Consensus 3 ~~~~~~~~G~~l~v~--d~v~i~~~N~l~~~~siH~HG~~~~~~~~~DG~~~-~q~~i~PG~~~~Y~f~~~~~~Gt~wYH 79 (491)
|-.++..+||+|++. |+|+|+|+|.++.+++|||||+++.+++++||+++ +||+|+||++|+|+|++ +++||||||
T Consensus 25 ~~~ng~~pGP~i~~~~Gd~v~v~~~N~l~~~~siH~HG~~~~~~~~~DG~p~~t~~~i~PG~~~~y~f~~-~~~Gt~wYH 103 (318)
T 3g5w_A 25 FAFNGQVPAPLIHVMEGDDVTVNVTNMTTLPHTIHWHGMLQRGTWQSDGVPHATQHAIEPGDTFTYKFKA-EPAGTMWYH 103 (318)
T ss_dssp EEETTBSSCCEEEEETTCEEEEEEEECSSSCBCCEEETCCCTTCGGGSCCBTTTBCCBCTTCEEEEEEEC-CSCEEEEEE
T ss_pred EEECCccCCceEEEeCCCEEEEEEEeCCCCceeEEecCcCCCCCcccCCCcccccccCCCCCEEEEEEEc-CCCEEEEEE
Confidence 345677899999874 89999999999999999999999988889999999 99999999999999999 589999999
Q ss_pred CCcccc--c-cCCceeEEEEecCCCCCCCCCCCCCcceEEeeecccCCHHHHHHHHhcCCCCCCCceEEEcCcCCC-cce
Q 011178 80 PSLAFH--K-AAGGYGGIKIASRPLIPVPFDPPAGDFTILAGDWYKKNHTDLKAILDSGSDLPFPDGLVINGRGSN-ANT 155 (491)
Q Consensus 80 ~H~~~q--~-~~Gl~G~liV~~~~~~~~~~~~~~~e~~l~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~vNG~~~~-~~~ 155 (491)
||.+.+ . .+||+|+|||++++..+.+. .+++|++|+|+||+++..... ...+.....++.++|||+.+. ...
T Consensus 104 ~H~~~~~~~~~~Gl~G~lIV~~~~~~~~~~-~~d~e~~l~l~dw~~~~~~~~---~~~~~~~~~~d~~~ING~~~~~~~~ 179 (318)
T 3g5w_A 104 CHVNVNEHVTMRGMWGPLIVEPKNPLPIEK-TVTKDYILMLSDWVSSWANKP---GEGGIPGDVFDYYTINAKSFPETQP 179 (318)
T ss_dssp CCSSHHHHHHHSCCEEEEEEECSSCCHHHH-TCCEEEEEEEEEECGGGTTCT---TCCCCTTCCCCEEEETTBCBTSSCC
T ss_pred ccCChhhhhccCCCEEEEEEcCCCcccccc-cccceeEEEEEeecccccccc---ccCCCCCCcCcEEEEcCcCCCCCcc
Confidence 999744 3 58999999999875322111 458999999999987643211 111222345789999999831 234
Q ss_pred EEEeCCCEEEEEEEEcCCCCeEeEEEeCceeEEEEecCccC-CCCccCeEEEcCCceEEEEEEeCCCCcceEEEEEeecc
Q 011178 156 FTVDQGKTYRFRISNVGISTSINFRIQGHKMLLVEVEGTHT-LQNTYDSLDIHLGQSYSVLVRADQPPQGYYIVISTRFT 234 (491)
Q Consensus 156 ~~v~~g~~~rlR~iN~~~~~~~~~~i~~~~~~via~DG~~~-~p~~~~~l~l~pGeR~dv~v~~~~~~g~~~i~~~~~~~ 234 (491)
+++++|++|||||+|++.. .+.|+|+||.|+||+.||.++ +|...+++.|+||||+||+++++ .+|.|.+.++....
T Consensus 180 l~v~~G~~vrlrliN~~~~-~h~~hlhGh~f~vi~~dG~~~~~p~~~dtv~l~pger~~v~~~a~-~pG~w~~hCH~~~H 257 (318)
T 3g5w_A 180 IRVKKGDVIRLRLIGAGDH-VHAIHTHGHISQIAFKDGFPLDKPIKGDTVLIGPGERYDVILNMD-NPGLWMIHDHVDTH 257 (318)
T ss_dssp EEECTTCEEEEEEEECSSS-CEEEEETTSCEEEEEETTEEEEEEEEESEEEECTTCEEEEEEECC-SCSEEEEEESSGGG
T ss_pred EEeCCCCEEEEEEEeCCCc-eEEEEECCcEEEEEecCCcccCCCccccEEEECCCCEEEEEEECC-CCeeEEEEeccHHH
Confidence 9999999999999999975 799999999999999999987 78889999999999999999999 68999998886532
Q ss_pred CC-----CcceEEEEEecCCC
Q 011178 235 SQ-----VLSATSVLHYSNSA 250 (491)
Q Consensus 235 ~~-----~~~~~ail~y~~~~ 250 (491)
.. .....++|+|.+..
T Consensus 258 ~~~g~~~~~Gm~~~i~~~g~~ 278 (318)
T 3g5w_A 258 TTNGDKPDGGIMTTIEYEEVG 278 (318)
T ss_dssp SCBTTBSSCBSEEEEEETTTC
T ss_pred hhccCcCCCCCEEEEEECCCC
Confidence 21 13457899998754
No 21
>3tas_A Small laccase, multi-copper oxidase; two-domain laccase, oxidoreductase, secreted; HET: PG4; 2.30A {Streptomyces viridosporus} PDB: 3tbb_A 3tbc_A*
Probab=100.00 E-value=1.9e-46 Score=371.78 Aligned_cols=219 Identities=17% Similarity=0.167 Sum_probs=173.5
Q ss_pred CCcccCCCCeEEE--eeeEEEEEEecCCCCCeeeecccCCCCCCCCCCCCCCCCCCCCCCeEEEEEEeC-----------
Q 011178 4 MNHFSSLGCSLIT--HLYTHLVVLNFIYMAPLITLNGVQQRRNSWQDGVYGTNCPIPPGKNFTYVLQVK----------- 70 (491)
Q Consensus 4 ~~~~~~~G~~l~v--~d~v~i~~~N~l~~~~siH~HG~~~~~~~~~DG~~~~q~~i~PG~~~~Y~f~~~----------- 70 (491)
.....-|||+||+ ||+|+|+|+|+|++++||||||+++. +.+||++.+||+|+||++|+|+|++.
T Consensus 34 ~~~~t~PGP~i~~~~Gd~v~v~~~N~l~~~~siH~HG~~~~--~~~dG~~~~~~~i~PG~~~~Y~~~~~~P~~~~~~~~~ 111 (313)
T 3tas_A 34 KGKATIPGPLIELNEGDTLHIEFENTMDVPVSLHVHGLDYE--ISSDGTKQSRSDVEPGGTRTYTWRTHVPGRRADGTWR 111 (313)
T ss_dssp TTCCBSSCCCEEEETTCEEEEEEEECSSSCBCCEESSSBCC--GGGSCSTTTTCCBCTTCEEEEEEBCCCCEECTTSCEE
T ss_pred cCCccccCCeEEEECCCEEEEEEEECCCCCccEeecCCcCC--ccCCCCccccCCcCCCCEEEEEEEeccCCcccccccc
Confidence 3445567888776 47888889999999999999999974 46999998999999999999999863
Q ss_pred -CCccceeEeCCcc------ccccCCceeEEEEecCCCCCCCCCCCCCcceEEeeecccCCHHHHHHHHhcCCCCCCCce
Q 011178 71 -DQIGSYFYFPSLA------FHKAAGGYGGIKIASRPLIPVPFDPPAGDFTILAGDWYKKNHTDLKAILDSGSDLPFPDG 143 (491)
Q Consensus 71 -~~~Gt~wYH~H~~------~q~~~Gl~G~liV~~~~~~~~~~~~~~~e~~l~l~d~~~~~~~~~~~~~~~~~~~~~~~~ 143 (491)
+++||||||||.. .|+++||+|+|||+++.. . .+|+|++|+++||+
T Consensus 112 ~~~~gt~~YH~h~~~~~~~~~~~~~Gl~G~liV~~~~~--~---~~d~e~~l~~~d~t---------------------- 164 (313)
T 3tas_A 112 AGSAGYWHYHDHVVGTEHGTGGIRNGLYGPVIVRRKGD--V---LPDRTHTIVFNDMT---------------------- 164 (313)
T ss_dssp CCSCEEEEEECSSSSSTTCHHHHHHTCEEEEEEECTTC--B---CCSEEEEEEEETTE----------------------
T ss_pred CCCceEEEEeecCcccccchhhhhccccCceEeecccc--c---cccccceeeccchh----------------------
Confidence 3679999999975 357899999999998753 2 33889988887751
Q ss_pred EEEcCcCCCcceEEEeCCCEEEEEEEEcCCCCeEeEEEeCceeEEEEecCccCCCCccCeEEEcCCceEEEEEEeCCCCc
Q 011178 144 LVINGRGSNANTFTVDQGKTYRFRISNVGISTSINFRIQGHKMLLVEVEGTHTLQNTYDSLDIHLGQSYSVLVRADQPPQ 223 (491)
Q Consensus 144 ~~vNG~~~~~~~~~v~~g~~~rlR~iN~~~~~~~~~~i~~~~~~via~DG~~~~p~~~~~l~l~pGeR~dv~v~~~~~~g 223 (491)
+||+.
T Consensus 165 --~Ng~~------------------------------------------------------------------------- 169 (313)
T 3tas_A 165 --INNRP------------------------------------------------------------------------- 169 (313)
T ss_dssp --ETTCC-------------------------------------------------------------------------
T ss_pred --cccCC-------------------------------------------------------------------------
Confidence 11110
Q ss_pred ceEEEEEeeccCCCcceEEEEEecCCCCCCCCCCCCCCCccccchhhhhhhhccCCCCCCCCCCCCCCCCccccccceEE
Q 011178 224 GYYIVISTRFTSQVLSATSVLHYSNSAGSVSGPPPGGPTTQIDWSLEQARSLRRNLTASGPRPNPQGSYHYGLINTTHTI 303 (491)
Q Consensus 224 ~~~i~~~~~~~~~~~~~~ail~y~~~~~~~~~~~p~~p~~~~~~~~~~~~~~~~~l~~~~~~~~p~~~~~~~~~~~~~~~ 303 (491)
.+..|
T Consensus 170 ---------------------------------~~~~~------------------------------------------ 174 (313)
T 3tas_A 170 ---------------------------------AHTGP------------------------------------------ 174 (313)
T ss_dssp ---------------------------------TTCCC------------------------------------------
T ss_pred ---------------------------------ccccc------------------------------------------
Confidence 00000
Q ss_pred EEeccccCcCCeEeEEEcCeeeeCCCCccccccccCCCCccccCCCCCCCCCCCcceeeeEEeecCCcEEEEEEEcCCCC
Q 011178 304 RLQNTAPTINGKQRYAVNSVSFIPADTPLKLADYFKIPGVFSVGSIPDNPTGGGAYLQTSVMAADFRGFAEVVFENPEDT 383 (491)
Q Consensus 304 ~l~~~~~~~~~~~~~~iNg~~f~~~~~p~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~g~~v~~~i~N~~~~ 383 (491)
+ +.++.|++|+|+|.|.+.+
T Consensus 175 ---------------------------~---------------------------------l~v~~Ge~vr~~liN~g~~ 194 (313)
T 3tas_A 175 ---------------------------D---------------------------------FEATVGDRVEFVMITHGEY 194 (313)
T ss_dssp ---------------------------C---------------------------------EEEETTCEEEEEEEEESSC
T ss_pred ---------------------------c---------------------------------cccccCCEEEEEEeccccc
Confidence 0 1234588899999999988
Q ss_pred CCceeccCCCeEEEeeccCCCCCCCCCCcccCCCCceeeEEeCCCCEEEEEEEc---cCcceeeeeecchhhhhcceEEE
Q 011178 384 LQSWHIDGHNFFAVGMDGGEWTPASRLTYNLRDTISRCTVQVYPKSWTAVYVPL---DNVGMWNIRSENWARQYLGQQFY 460 (491)
Q Consensus 384 ~HP~HlHG~~F~Vl~~g~g~~~~~~~~~~~~~~p~~rDTv~v~p~~~~~irf~a---dnpG~w~~HCHil~H~d~GMm~~ 460 (491)
.||||||||.|+|+.++... .....+.++||+.|.|++.+.+++.+ +|||.|+||||+++|++.|||+.
T Consensus 195 ~hpfHlHGh~F~v~~~~~~~--------~~~~~~~~~Dtv~l~Pger~~v~v~a~~~~nPG~w~~HCHi~~H~~~GM~~~ 266 (313)
T 3tas_A 195 YHTFHLHGHRWADNRTGMLT--------GPDDPSQVIDNKICGPADSFGFQVIAGEGVGAGAWMYHCHVQSHSDMGMVGL 266 (313)
T ss_dssp CEEEEETTCCEESSTTSSCC--------STTCCCCEESEEEECTTCEEEEEEETTTTTCSEEEEEEECSHHHHHTTCEEE
T ss_pred ceeeeecCCeeEEEEECCcc--------CCCCCCeeeeEEEeCCCcceEEEEEeccCCCCEeEEEEeCChHHHHCCCeEE
Confidence 99999999999998875321 12234679999999999988877754 68999999999999999999999
Q ss_pred EEEecCCcc
Q 011178 461 LRVYSSANS 469 (491)
Q Consensus 461 ~~V~~~~~~ 469 (491)
|+|.+++..
T Consensus 267 f~V~~~d~~ 275 (313)
T 3tas_A 267 FLVKKPDGT 275 (313)
T ss_dssp EEEECTTCC
T ss_pred EEEECCCCC
Confidence 999988764
No 22
>3t9w_A Small laccase, multi-copper oxidase; two-domain copper oxidase, Cu-binding, oxidoreducta; 1.50A {Amycolatopsis SP}
Probab=100.00 E-value=1e-46 Score=370.75 Aligned_cols=110 Identities=17% Similarity=0.186 Sum_probs=91.5
Q ss_pred CCCcccCCCCeEEE--eeeEEEEEEecCCCCCeeeecccCCCCCCCCCCCCCCCCCCCCCCeEEEEEEeC----------
Q 011178 3 WMNHFSSLGCSLIT--HLYTHLVVLNFIYMAPLITLNGVQQRRNSWQDGVYGTNCPIPPGKNFTYVLQVK---------- 70 (491)
Q Consensus 3 ~~~~~~~~G~~l~v--~d~v~i~~~N~l~~~~siH~HG~~~~~~~~~DG~~~~q~~i~PG~~~~Y~f~~~---------- 70 (491)
|...+.-|||+||+ ||+|+|+|+|+|++++||||||+++. +++||++.+||+|+||++|+|+|+++
T Consensus 49 ~~~~gt~PGP~i~~~~GD~v~v~~~N~l~~~~siH~HG~~~~--~~~DG~~~~~~~i~PG~t~~Y~~~~~~~~~~~~~~~ 126 (299)
T 3t9w_A 49 APGGATVPGPVLEMWEGDTLEIDLVNTTDRVLSLHPHGVDYD--VNSDGTLMNGSAVMPGQTRRYTWRSHVGYRRADGSW 126 (299)
T ss_dssp STTCCBSSCCCEEEETTCEEEEEEEECSSSCBCCEESSSBCC--GGGSCCTTTTCCBCTTCEEEEEEBCCCCEECTTSCE
T ss_pred cCCCCCccCceEEEECCeEEEEEEEECCCCCccEEeCCcccC--CccCCCccccCccCCCCeEEEEEEeecccccCCCcC
Confidence 44567778888886 48889999999999999999999974 56999988999999999999999985
Q ss_pred --CCccceeEeCCcc------ccccCCceeEEEEecCCCCCCCCCCCCCcceEEeee
Q 011178 71 --DQIGSYFYFPSLA------FHKAAGGYGGIKIASRPLIPVPFDPPAGDFTILAGD 119 (491)
Q Consensus 71 --~~~Gt~wYH~H~~------~q~~~Gl~G~liV~~~~~~~~~~~~~~~e~~l~l~d 119 (491)
+++||||||||.. .|+++||+|+|||+++.. . .+|+|++|++++
T Consensus 127 ~~~~~gt~~YH~H~~~~~~~~~~~~~GL~G~liV~~~~~--~---~~d~e~~l~~~~ 178 (299)
T 3t9w_A 127 AEGTAGYWHYHDHAMGTEHGTEGVLKGLYGALVVRRQGD--L---LPKRQFTVVFND 178 (299)
T ss_dssp ECCCCEEEEEECSSSSSTTCHHHHHHTCEEEEEEECTTC--C---CCSEEEEEEEET
T ss_pred CCCCceeEEEecCCcccccchhhhcccccceEEEecccc--c---Cccccceeeeee
Confidence 2689999999974 478899999999998653 1 236777776644
No 23
>2dv6_A Nitrite reductase; electron transfer, reduction, denitrification, oxidoreductase; 2.20A {Hyphomicrobium denitrificans}
Probab=100.00 E-value=8.3e-46 Score=386.14 Aligned_cols=366 Identities=15% Similarity=0.111 Sum_probs=241.3
Q ss_pred CCeEEEe--eeEEEEEEecCCCCCeeeecccCCCCCCCCCCCCCCCCCCCCCCeEEEEEEeCCCccceeEeCCccccccC
Q 011178 11 GCSLITH--LYTHLVVLNFIYMAPLITLNGVQQRRNSWQDGVYGTNCPIPPGKNFTYVLQVKDQIGSYFYFPSLAFHKAA 88 (491)
Q Consensus 11 G~~l~v~--d~v~i~~~N~l~~~~siH~HG~~~~~~~~~DG~~~~q~~i~PG~~~~Y~f~~~~~~Gt~wYH~H~~~q~~~ 88 (491)
||+|+|. |+|+|+|+|.+...++|||||... .++|+|+||++++|+|++. ++||||||||...|+.+
T Consensus 54 ~p~i~v~~Gd~v~~~~~N~~~~~h~~~~~g~~~----------~~~~~i~pG~~~~~~f~~~-~~Gt~~y~~~~~~h~~~ 122 (447)
T 2dv6_A 54 NPTLVVHEGETVQVNLVNGEGAQHDVVVDQYAA----------RSAIVNGKNASSTFSFVAS-KVGEFNYYCSIAGHRQA 122 (447)
T ss_dssp SCCEEEETTCEEEEEEECSSSSCBCCEETTTTE----------ECCCBCSTTBEEEEEEECC-SCEEEEEECCSTTHHHH
T ss_pred CCeEEEcCCCEEEEEEEcCCCCceEEEEccCCc----------ccceecCCCCeEEEEEEcC-CCEEEEEEeCCCChhhC
Confidence 7888774 788999999998889999998631 1589999999999999995 79999999999889999
Q ss_pred CceeEEEEecCCCCCCCCC-----CCCCcceEEeeecccCCHHH--HH-HHHhcCC-CCCCCceEEEcCcCCCcceEEEe
Q 011178 89 GGYGGIKIASRPLIPVPFD-----PPAGDFTILAGDWYKKNHTD--LK-AILDSGS-DLPFPDGLVINGRGSNANTFTVD 159 (491)
Q Consensus 89 Gl~G~liV~~~~~~~~~~~-----~~~~e~~l~l~d~~~~~~~~--~~-~~~~~~~-~~~~~~~~~vNG~~~~~~~~~v~ 159 (491)
||+|.|+|+++.......+ ....+++..+ |+....... +. ....... .....+.+++||+.. .|+|+++
T Consensus 123 Gm~G~i~V~~~~~~~~~~~~~~~~~~~~~~p~~~-d~~~~~~~~~~l~~~~~~~~~~~g~~~~~~~~NG~~p-gp~i~v~ 200 (447)
T 2dv6_A 123 GMEGNIQVLPGNRAEMKSSGADITRDPADLPGPI-GPRQAKTVRIDLETVEVKGQLDDNTTYTYWTFNGKVP-GPFLRVR 200 (447)
T ss_dssp TCEEEEEEESSCCCCCCCSSBCCBCCTTCSCCCC-CSCCCCEEEEEEEEEEEEEEEETTEEEEEEEETTBBS-CCCEEEE
T ss_pred CCEEEEEEeCCccccCCCcchhhccChhhcCCcc-ccCCCcEEEEEEEEEEEEEeccCCceeEEEEECCccC-CCeEEec
Confidence 9999999998654221000 0011111111 111100000 00 0000000 112346789999853 5899999
Q ss_pred CCCEEEEEEEEcCC-CCeEeEEEeCceeEEEEecCccCCCCccCeEEEcCCceEEEEEEeCCCCcceEEEEEeecc-CC-
Q 011178 160 QGKTYRFRISNVGI-STSINFRIQGHKMLLVEVEGTHTLQNTYDSLDIHLGQSYSVLVRADQPPQGYYIVISTRFT-SQ- 236 (491)
Q Consensus 160 ~g~~~rlR~iN~~~-~~~~~~~i~~~~~~via~DG~~~~p~~~~~l~l~pGeR~dv~v~~~~~~g~~~i~~~~~~~-~~- 236 (491)
+|++||||++|.+. ...+.++++|. ++.||.+ +.+.|.||||+++++++++ +|+||+.++.... .+
T Consensus 201 ~G~~v~~rl~N~~~~~~~~~ih~Hg~----~~~DG~~------~~~~i~pG~~~~~~~~~~~-~G~~~yh~h~~~~~~~~ 269 (447)
T 2dv6_A 201 VGDTVELHLKNHKDSLMVHSVDFHGA----TGPGGAA------AFTQTDPGEETVVTFKALI-PGIYVYHCATPSVPTHI 269 (447)
T ss_dssp TTCEEEEEEEECTTCSSCBCCEETTC----CSGGGGG------GGCCBCTTCEEEEEEECCS-CEEEEEECCSSSHHHHH
T ss_pred CCCEEEEEEEeCCCCceeEEEeeccc----cCCCCCC------ccEEeCCCCEEEEEEECCC-CeEEEEEeCCCChHHHH
Confidence 99999999999985 34567777763 3678873 2345999999999999985 6999998875210 11
Q ss_pred CcceEEEEEecCCCCCCCCCCCCCCCccccchhhhhhhhccCCCCCCCCCCCCCCCCccccccceEEEEeccccCcCCeE
Q 011178 237 VLSATSVLHYSNSAGSVSGPPPGGPTTQIDWSLEQARSLRRNLTASGPRPNPQGSYHYGLINTTHTIRLQNTAPTINGKQ 316 (491)
Q Consensus 237 ~~~~~ail~y~~~~~~~~~~~p~~p~~~~~~~~~~~~~~~~~l~~~~~~~~p~~~~~~~~~~~~~~~~l~~~~~~~~~~~ 316 (491)
.....+.|.|.... .+|. .+.+..+. .-++..... ....+. ..+.+... ......
T Consensus 270 ~~Gl~g~l~v~~~~-----~~P~---~d~~~~~~---~~~~~~~~~---~~~~g~---------~~~~~~~~--~~~~~~ 324 (447)
T 2dv6_A 270 TNGMYGLLLVEPEG-----GLPQ---VDREFYVM---QGEIYTVKS---FGTSGE---------QEMDYEKL--INEKPE 324 (447)
T ss_dssp HTTCEEEEEEECTT-----CSCC---CSEEEEEE---EEEECBSSC---TTCCEE---------CCBBHHHH--HTTCCS
T ss_pred hCCCEEEEEEeCCC-----CCCC---CCeeEEEE---ecccccCCc---cccccc---------ccCChHHh--hccCCC
Confidence 12345777776432 1221 11110000 000100000 000000 00000000 001234
Q ss_pred eEEEcCeeeeCCCCccccccccCCCCccccCCCCCCCCCCCcceeeeEEeecCCcEEEEEEEcCC-CCCCceeccCCCeE
Q 011178 317 RYAVNSVSFIPADTPLKLADYFKIPGVFSVGSIPDNPTGGGAYLQTSVMAADFRGFAEVVFENPE-DTLQSWHIDGHNFF 395 (491)
Q Consensus 317 ~~~iNg~~f~~~~~p~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~g~~v~~~i~N~~-~~~HP~HlHG~~F~ 395 (491)
.|.|||+.|.... ..++.++.|++++|+|.|.+ ...||||||||+|+
T Consensus 325 ~~~iNG~~~~~~~--------------------------------~~~~~v~~g~~vrlrliN~~~~~~h~~hlhGh~f~ 372 (447)
T 2dv6_A 325 YFLFNGSVGSLTR--------------------------------SHPLYASVGETVRIFFGVGGPNFTSSFHVIGEIFD 372 (447)
T ss_dssp EEEETTSTTCCCC--------------------------------CCCEEECTTCEEEEEEEEEESSCCEEEEEETCCEE
T ss_pred EEEECCcccCCCC--------------------------------CcceEECCCCEEEEEEEeCCCCceEeEEEcCcEEE
Confidence 6899998763100 12367889999999999987 46799999999999
Q ss_pred EEeeccCCCCCCCCCCcccCCCC-ceeeEEeCCCCEEEEEEEccCcceeeeeecchhhhhcceEEEEEEecCC
Q 011178 396 AVGMDGGEWTPASRLTYNLRDTI-SRCTVQVYPKSWTAVYVPLDNVGMWNIRSENWARQYLGQQFYLRVYSSA 467 (491)
Q Consensus 396 Vl~~g~g~~~~~~~~~~~~~~p~-~rDTv~v~p~~~~~irf~adnpG~w~~HCHil~H~d~GMm~~~~V~~~~ 467 (491)
||+++++ + +..|. +|||+.|+|+++++|+|+++|||.|+||||+++|++.|||+.|+|..+.
T Consensus 373 vv~~dG~-~---------~~~p~~~~dtv~l~pg~r~~i~~~~~~pG~~~~hch~~~h~~~Gm~~~~~v~~~~ 435 (447)
T 2dv6_A 373 HVYSLGS-V---------VSPPLIGVQTVSVPPGGATIVDFKIDRAGRYILVDHALSRLEHGLVGFLNVDGPK 435 (447)
T ss_dssp EECGGGC-S---------SSCCEEEESEEEECTTEEEEEEEECCSCEEEEEEESSGGGGGGTCCEEEEECSCS
T ss_pred EEEcCCc-c---------cCCCcccccEEEECCCcEEEEEEECCCCEEEEEEecCcCccccCCEEEEEEeCCC
Confidence 9999643 2 22344 7999999999999999999999999999999999999999999997544
No 24
>3kw8_A Laccase, putative copper oxidase; two-domain laccase, oxidoreductase, multicopper blue protein; HET: PG4 PGE; 2.29A {Streptomyces coelicolor} PDB: 4gxf_A* 4gy4_A*
Probab=100.00 E-value=6.4e-46 Score=361.63 Aligned_cols=220 Identities=16% Similarity=0.174 Sum_probs=176.9
Q ss_pred CCCcccCCCCeEEEe--eeEEEEEEecCCCCCeeeecccCCCCCCCCCCCCCCCCCCCCCCeEEEEEEeCC---------
Q 011178 3 WMNHFSSLGCSLITH--LYTHLVVLNFIYMAPLITLNGVQQRRNSWQDGVYGTNCPIPPGKNFTYVLQVKD--------- 71 (491)
Q Consensus 3 ~~~~~~~~G~~l~v~--d~v~i~~~N~l~~~~siH~HG~~~~~~~~~DG~~~~q~~i~PG~~~~Y~f~~~~--------- 71 (491)
|-+++..+||+||+. |+|+|+|+|+|++++||||||+++.. ++||++.+||+|+||++|+|+|++.+
T Consensus 27 ~~~ng~~pGP~i~~~~Gd~v~v~~~N~~~~~~siH~HG~~~~~--~~DG~~~t~~~i~pG~~~~Y~f~~~~~~~~~~g~~ 104 (276)
T 3kw8_A 27 EKGKASVPGPLIEVNEGDTLHIEFTNTMDVRASLHVHGLDYEI--SSDGTAMNKSDVEPGGTRTYTWRTHKPGRRDDGTW 104 (276)
T ss_dssp STTCCBSSCCCEEEETTCEEEEEEEECSSSCBCCEESSSBCCG--GGSCCTTTTCSBCTTCEEEEEEECCCCEECTTSCE
T ss_pred eccCCcccCCeEEEECCCEEEEEEEECCCCCccEeecCcccCC--ccCCCcCCcCCCCCCCEEEEEEEcCCccccccCcc
Confidence 446788999999874 89999999999999999999999854 69999988999999999999999963
Q ss_pred ---CccceeEeCCcc------ccccCCceeEEEEecCCCCCCCCCCCCCcceEEeeecccCCHHHHHHHHhcCCCCCCCc
Q 011178 72 ---QIGSYFYFPSLA------FHKAAGGYGGIKIASRPLIPVPFDPPAGDFTILAGDWYKKNHTDLKAILDSGSDLPFPD 142 (491)
Q Consensus 72 ---~~Gt~wYH~H~~------~q~~~Gl~G~liV~~~~~~~~~~~~~~~e~~l~l~d~~~~~~~~~~~~~~~~~~~~~~~ 142 (491)
++||||||||.+ .|+++||+|+|||++++.. . .|+|++|+++||
T Consensus 105 ~~~~~gt~~YH~h~~~~~~~~~~~~~Gl~G~liV~~~~~~--~---~drE~~l~l~~~---------------------- 157 (276)
T 3kw8_A 105 RPGSAGYWHYHDHVVGTEHGTGGIRNGLYGPVIVRRKGDV--L---PDATHTIVFNDM---------------------- 157 (276)
T ss_dssp ECCSCEEEEEECSSSSSTTCHHHHHHTCEEEEEEECTTCC--C---CSEEEEEEEETT----------------------
T ss_pred CCCCCEEEEEecCccccccchhhhhCccEEEEEEecCCCc--c---cccceEEEeccc----------------------
Confidence 379999999984 5899999999999997632 1 267777765331
Q ss_pred eEEEcCcCCCcceEEEeCCCEEEEEEEEcCCCCeEeEEEeCceeEEEEecCccCCCCccCeEEEcCCceEEEEEEeCCCC
Q 011178 143 GLVINGRGSNANTFTVDQGKTYRFRISNVGISTSINFRIQGHKMLLVEVEGTHTLQNTYDSLDIHLGQSYSVLVRADQPP 222 (491)
Q Consensus 143 ~~~vNG~~~~~~~~~v~~g~~~rlR~iN~~~~~~~~~~i~~~~~~via~DG~~~~p~~~~~l~l~pGeR~dv~v~~~~~~ 222 (491)
+|||+.
T Consensus 158 --~iNG~~------------------------------------------------------------------------ 163 (276)
T 3kw8_A 158 --TINNRK------------------------------------------------------------------------ 163 (276)
T ss_dssp --EETTCC------------------------------------------------------------------------
T ss_pred --ccceec------------------------------------------------------------------------
Confidence 111111
Q ss_pred cceEEEEEeeccCCCcceEEEEEecCCCCCCCCCCCCCCCccccchhhhhhhhccCCCCCCCCCCCCCCCCccccccceE
Q 011178 223 QGYYIVISTRFTSQVLSATSVLHYSNSAGSVSGPPPGGPTTQIDWSLEQARSLRRNLTASGPRPNPQGSYHYGLINTTHT 302 (491)
Q Consensus 223 g~~~i~~~~~~~~~~~~~~ail~y~~~~~~~~~~~p~~p~~~~~~~~~~~~~~~~~l~~~~~~~~p~~~~~~~~~~~~~~ 302 (491)
T Consensus 164 -------------------------------------------------------------------------------- 163 (276)
T 3kw8_A 164 -------------------------------------------------------------------------------- 163 (276)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred EEEeccccCcCCeEeEEEcCeeeeCCCCccccccccCCCCccccCCCCCCCCCCCcceeeeEEeecCCcEEEEEEEcCCC
Q 011178 303 IRLQNTAPTINGKQRYAVNSVSFIPADTPLKLADYFKIPGVFSVGSIPDNPTGGGAYLQTSVMAADFRGFAEVVFENPED 382 (491)
Q Consensus 303 ~~l~~~~~~~~~~~~~~iNg~~f~~~~~p~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~g~~v~~~i~N~~~ 382 (491)
|. . ...+.++.|++|+|+|.|.+.
T Consensus 164 ----------------------~~--~--------------------------------~p~i~v~~G~~vri~l~N~~~ 187 (276)
T 3kw8_A 164 ----------------------PH--T--------------------------------GPDFEATVGDRVEIVMITHGE 187 (276)
T ss_dssp ----------------------TT--C--------------------------------CCCEEEETTCEEEEEEEEESS
T ss_pred ----------------------cc--C--------------------------------CCCEEEecCCEEEEEEecCCC
Confidence 00 0 001345678999999999988
Q ss_pred CCCceeccCCCeEEEeeccCCCCCCCCCCcccCCCCceeeEEeCCCCEEEEEEEcc---CcceeeeeecchhhhhcceEE
Q 011178 383 TLQSWHIDGHNFFAVGMDGGEWTPASRLTYNLRDTISRCTVQVYPKSWTAVYVPLD---NVGMWNIRSENWARQYLGQQF 459 (491)
Q Consensus 383 ~~HP~HlHG~~F~Vl~~g~g~~~~~~~~~~~~~~p~~rDTv~v~p~~~~~irf~ad---npG~w~~HCHil~H~d~GMm~ 459 (491)
+.|||||||+.|++++. |.+... ...+.++||+.|.|++.+.++|+++ |||.|+||||+++|++.|||.
T Consensus 188 ~~Hp~HlHG~~f~v~~~--G~~~~p------~~~~~~~Dtv~v~pg~~~~~~~~~~~~~npG~w~~HCH~~~H~~~GM~g 259 (276)
T 3kw8_A 188 YYHTFHMHGHRWADNRT--GILTGP------DDPSRVIDNKITGPADSFGFQIIAGEGVGAGAWMYHCHVQSHSDMGMVG 259 (276)
T ss_dssp CCEEEEETTCCEESSSS--SSCCST------TCCCCEESEEEECTTCEEEEEEETTTTTCSEEEEEEECSHHHHHTTCEE
T ss_pred cceeEEEccceeEEecc--CccCCC------cccccCCccEEeCCCceEEEEEEeccCCCCCeEEEECCCchHhhCCCeE
Confidence 89999999999999764 333211 1224699999999999999999997 899999999999999999999
Q ss_pred EEEEecCCcc
Q 011178 460 YLRVYSSANS 469 (491)
Q Consensus 460 ~~~V~~~~~~ 469 (491)
.|+|.++++.
T Consensus 260 ~~~V~~~~~~ 269 (276)
T 3kw8_A 260 LFLVKKPDGT 269 (276)
T ss_dssp EEEEECTTSC
T ss_pred EEEEeCCCCC
Confidence 9999887653
No 25
>2zwn_A Two-domain type laccase; muticopper oxidase, oxidoreductase; 1.70A {Metagenomes}
Probab=100.00 E-value=2e-45 Score=368.60 Aligned_cols=241 Identities=20% Similarity=0.318 Sum_probs=196.2
Q ss_pred CCCcccCCCCeEEE--eeeEEEEEEecCCCCCeeeecccCCCCCCCCCCCCC-CCCCCCCCCeEEEEEEeCCCccceeEe
Q 011178 3 WMNHFSSLGCSLIT--HLYTHLVVLNFIYMAPLITLNGVQQRRNSWQDGVYG-TNCPIPPGKNFTYVLQVKDQIGSYFYF 79 (491)
Q Consensus 3 ~~~~~~~~G~~l~v--~d~v~i~~~N~l~~~~siH~HG~~~~~~~~~DG~~~-~q~~i~PG~~~~Y~f~~~~~~Gt~wYH 79 (491)
|..++..+||+|++ ||+|+|+|+|.++++++|||||+++.+++|+||+++ +||+|+||++|+|+|++. ++||||||
T Consensus 26 ~~~NG~~pGP~I~v~~Gd~v~v~v~N~l~~~~siH~HG~~~~~~~~~DGvp~vtq~~I~PG~~~~y~f~~~-~~Gt~wyH 104 (339)
T 2zwn_A 26 FGFNGQVPGPLIHVQEGDDVIVNVTNNTSLPHTIHWHGVHQKGTWRSDGVPGVTQQPIEAGDSYTYKFKAD-RIGTLWYH 104 (339)
T ss_dssp EEETTBSSCCEEEEETTCEEEEEEEEESSSCBCCEEETCCCTTCGGGSCCBTTTBCCBCTTCEEEEEEECC-SCEEEEEE
T ss_pred EEECCccCCCeEEEECCCEEEEEEEECCCCCccEEeCCCCcCCCcccCCCCccccCccCCCCeEEEEEECC-CCEEEEEE
Confidence 34567778999987 489999999999999999999999999999999998 999999999999999994 89999999
Q ss_pred CCccc--ccc-CCceeEEEEecCCCCCCCCCCCCCcceEEeeecccCCHHHHHHHHhcCCCCCCCceEEEcCcCCC-cce
Q 011178 80 PSLAF--HKA-AGGYGGIKIASRPLIPVPFDPPAGDFTILAGDWYKKNHTDLKAILDSGSDLPFPDGLVINGRGSN-ANT 155 (491)
Q Consensus 80 ~H~~~--q~~-~Gl~G~liV~~~~~~~~~~~~~~~e~~l~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~vNG~~~~-~~~ 155 (491)
||... |+. +||+|+|||++++....+. ..++|++++|+||+....... ...+.....++.++|||+.+. ...
T Consensus 105 ~H~~~~~q~~~~Gl~G~liV~p~~~~~~~~-~~d~e~~l~l~d~~~~~~~~~---~~~g~~~~~~~~~~ING~~~~~~~~ 180 (339)
T 2zwn_A 105 CHVNVNEHVGVRGMWGPLIVDPKQPLPIEK-RVTKDVIMMMSTWESAVADKY---GEGGTPMNVADYFSVNAKSFPLTQP 180 (339)
T ss_dssp CCSSHHHHTTTSCCEEEEEEECSSCCTTGG-GCSEEEEEEEEEECGGGTTCT---TCCCSTTSCCCEEEETTBCTTSSCC
T ss_pred ecCCchhhhhcCCceEeEEecCCCcccccc-cCCceEEEEeeheeccccccc---CCCCCCccccceEEEccccCCCccc
Confidence 99874 888 9999999999865422111 347899999999987421100 001112235789999999841 234
Q ss_pred EEEeCCCEEEEEEEEcCCCCeEeEEEeCceeEEEEecCccCC-CCccCeEEEcCCceEEEEEEeCCCCcceEEEEEeecc
Q 011178 156 FTVDQGKTYRFRISNVGISTSINFRIQGHKMLLVEVEGTHTL-QNTYDSLDIHLGQSYSVLVRADQPPQGYYIVISTRFT 234 (491)
Q Consensus 156 ~~v~~g~~~rlR~iN~~~~~~~~~~i~~~~~~via~DG~~~~-p~~~~~l~l~pGeR~dv~v~~~~~~g~~~i~~~~~~~ 234 (491)
+++++|++|||||+|++.. .+.|+|+||.|+||+.||.+++ |...+++.|+||||+||+|+++ .+|.|.+.+.....
T Consensus 181 ~~v~~G~~vrlrliN~~~~-~h~~hlhGh~f~vi~~DG~~~~~p~~~dtv~l~pg~r~~v~~~~~-~pG~w~~hch~~~H 258 (339)
T 2zwn_A 181 LRVKKGDVVKIRFFGAGGG-IHAMHSHGHDMLVTHKDGLPLDSPYYADTVLVSPGERYDVIIEAD-NPGRFIFHDHVDTH 258 (339)
T ss_dssp EEECTTCEEEEEEEECSSS-CEEEEETTCCEEEEEETTEEEEEEEEESEEEECTTCEEEEEEECC-SCSEEEEEECCGGG
T ss_pred EEECCCCEEEEEEEeCCCc-eEEEEECCcEEEEEEeCCeecCCCcEEEEEEECCCCEEEEEEEeC-CCeeEEEEEechhh
Confidence 9999999999999999955 8999999999999999999885 7788999999999999999998 57998888775432
Q ss_pred ---C--CCcceEEEEEecCCC
Q 011178 235 ---S--QVLSATSVLHYSNSA 250 (491)
Q Consensus 235 ---~--~~~~~~ail~y~~~~ 250 (491)
. ......++|+|.+..
T Consensus 259 ~~~~~~~~~gm~a~l~~~g~~ 279 (339)
T 2zwn_A 259 VTAGGKHPGGPITVIEYDGVP 279 (339)
T ss_dssp SCBTTBSSCSSEEEEEETTSC
T ss_pred cccccccCCCcEEEEEECCCC
Confidence 0 223457899998654
No 26
>2j5w_A Ceruloplasmin, ferroxidase; oxidoreductase, plasma protein, copper transport, copper, transport, polymorphism, glycoprotein, multi-copper oxidase; HET: NAG; 2.80A {Homo sapiens} SCOP: b.6.1.3 b.6.1.3 b.6.1.3 b.6.1.3 b.6.1.3 PDB: 1kcw_A*
Probab=100.00 E-value=7.7e-45 Score=411.97 Aligned_cols=366 Identities=10% Similarity=0.058 Sum_probs=237.4
Q ss_pred eeeEEEEEEecCCCCCeeeecccCCCC-CCCCCCCCC-CCCCCCCCCeEEEEEEeCCCccceeEeCCccccccCCceeEE
Q 011178 17 HLYTHLVVLNFIYMAPLITLNGVQQRR-NSWQDGVYG-TNCPIPPGKNFTYVLQVKDQIGSYFYFPSLAFHKAAGGYGGI 94 (491)
Q Consensus 17 ~d~v~i~~~N~l~~~~siH~HG~~~~~-~~~~DG~~~-~q~~i~PG~~~~Y~f~~~~~~Gt~wYH~H~~~q~~~Gl~G~l 94 (491)
||+|.++|.|. .+.+||||+++.+ +.++||++. | |+|.||.+|+|+|++ +++||||||||.+.|+.+||.|+|
T Consensus 639 gd~v~~~v~~~---g~~~~~Hgl~~~g~t~~~dG~~~~t-~~i~pg~~~t~~~~~-~~~Gt~~~h~h~~~~~~~Gm~g~~ 713 (1065)
T 2j5w_A 639 GDSVVWYLFSA---GNEADVHGIYFSGNTYLWRGERRDT-ANLFPQTSLTLHMWP-DTEGTFNVECLTTDHYTGGMKQKY 713 (1065)
T ss_dssp TCCEEEEEECC---CSTTCCEEEEETTCCEEETTEEESE-EEECTTCEEEEEECC-CSCEEEEEEECSHHHHHTTCEEEE
T ss_pred CCEEEEEEEcC---CCcceEEeeEEeCCceeecCeecce-EeecCCceEEEEEec-CCCeEEEEecCCCcccCCCcEEEE
Confidence 45666679876 5569999999998 999999998 7 999999999999999 599999999999999999999999
Q ss_pred EEecCCCCCCCCCCCCCcceEEe----eecccCCHHHHHH-HHh-cCCC----------CCCCc------eEEEcCcC--
Q 011178 95 KIASRPLIPVPFDPPAGDFTILA----GDWYKKNHTDLKA-ILD-SGSD----------LPFPD------GLVINGRG-- 150 (491)
Q Consensus 95 iV~~~~~~~~~~~~~~~e~~l~l----~d~~~~~~~~~~~-~~~-~~~~----------~~~~~------~~~vNG~~-- 150 (491)
+|++......++..++.|.+++| +||++.....+.. +.. .+.. ...+. ++-+.+..
T Consensus 714 ~V~~~~~~~~~~~~yd~e~~~~iaa~~~dW~~~~~~~~~~~~~~~~~~~p~~~~~n~~~~~iG~tY~k~~y~~~~d~tft 793 (1065)
T 2j5w_A 714 TVNQCRRQSEDSTFYLGERTYYIAAVEVEWDYSPQREWEKELHHLQEQNVSNAFLDKGEFYIGSKYKKVVYRQYTDSTFR 793 (1065)
T ss_dssp EEECCSCCCSCCCCCSEEEEEEEEEEEEEEESCSCCHHHHHHHHHHTCCCCCTTTCCTTTCCCSEEEEEEEEEESSTTCC
T ss_pred EEcCCccccCCccCCCcceEEEEeeeeccccCCcchhhhhhccCCCccCccceeecCCCccccceEeeeEEEEEcCCcce
Confidence 99987543334336678899999 8999987654321 111 1110 00011 11122111
Q ss_pred -------------CCcceEEEeCCCEEEEEEEEcCCCCeEeEEEeCceeEEEEecCccCCCCccCeEEEcCCceEEEEEE
Q 011178 151 -------------SNANTFTVDQGKTYRFRISNVGISTSINFRIQGHKMLLVEVEGTHTLQNTYDSLDIHLGQSYSVLVR 217 (491)
Q Consensus 151 -------------~~~~~~~v~~g~~~rlR~iN~~~~~~~~~~i~~~~~~via~DG~~~~p~~~~~l~l~pGeR~dv~v~ 217 (491)
...|+|.+++|+++++|+.|... ..+.++.+|. .+.+. | ...+.||+++...+.
T Consensus 794 ~~~~r~~~~~~v~~pGP~I~v~~Gd~v~v~l~N~~~-~~~sih~HGl--~~~~~-~---------~~~i~PG~~~ty~~~ 860 (1065)
T 2j5w_A 794 VPVERKAEEEHLGILGPQLHADVGDKVKIIFKNMAT-RPYSIHAHGV--QTESS-T---------VTPTLPGETLTYVWK 860 (1065)
T ss_dssp SBCCCCGGGGGGTTSCCCEEEETTEEEEEEEEECSS-SCBCCEESSC--BCSCS-C---------CCCBCTTCEEEEEEE
T ss_pred ecccCCccccccCCCCCEEEEecCCEEEEEEEeCCC-CCceEeeccc--cccCC-C---------CceeCCCCeEEEEEE
Confidence 12489999999999999999965 4666666663 33222 1 225679999888888
Q ss_pred eCCC---------CcceEEEEEeeccCCC-cceEEEEEecCCCCCCCCCCCCCCCccccchhhh--h-hhhccCCCCC--
Q 011178 218 ADQP---------PQGYYIVISTRFTSQV-LSATSVLHYSNSAGSVSGPPPGGPTTQIDWSLEQ--A-RSLRRNLTAS-- 282 (491)
Q Consensus 218 ~~~~---------~g~~~i~~~~~~~~~~-~~~~ail~y~~~~~~~~~~~p~~p~~~~~~~~~~--~-~~~~~~l~~~-- 282 (491)
+.+. +|.||...+.....+. ....+.|.+....... ....| .+.+..+.. . ....+.+...
T Consensus 861 ~~~~~gp~~~~~~~gt~wYhsh~~~~~q~~~GL~G~liV~~~~~l~---~~~~~-~d~D~~l~~~~~d~~~~~y~~~n~~ 936 (1065)
T 2j5w_A 861 IPERSGAGTEDSACIPWAYYSTVDQVKDLYSGLIGPLIVCRRPYLK---VFNPR-RKLEFALLFLVFDENESWYLDDNIK 936 (1065)
T ss_dssp CCGGGSCCTTSCSEEEEEEECCTTHHHHHHTTCEEEEEEECCC--------CCC-CEEEEEEEEEEEEGGGSTTHHHHHH
T ss_pred ecCccCCccccCCceEEEEecCCChHHhhhccccceeEecCccccc---ccCCC-cceEEEEEEEeecCCcceeeccCcc
Confidence 7642 2578876553211111 1223444443221100 00011 121110000 0 0000000000
Q ss_pred CCCCCCCCCCCccccccceEEEEeccccCcCCeEeEEEcCeeeeCCCCccccccccCCCCccccCCCCCCCCCCCcceee
Q 011178 283 GPRPNPQGSYHYGLINTTHTIRLQNTAPTINGKQRYAVNSVSFIPADTPLKLADYFKIPGVFSVGSIPDNPTGGGAYLQT 362 (491)
Q Consensus 283 ~~~~~p~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~iNg~~f~~~~~p~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~ 362 (491)
...+.|.. ...... .+ ......|.|||+.|.. .
T Consensus 937 ~~~~~P~~------v~~~~~-~~------~~~~~~~~iNG~~~~~----------------------------------~ 969 (1065)
T 2j5w_A 937 TYSDHPEK------VNKDDE-EF------IESNKMHAINGRMFGN----------------------------------L 969 (1065)
T ss_dssp HHCSCGGG------CCTTCH-HH------HHHTEEEEETTBCTTC----------------------------------C
T ss_pred cccCCccc------cCcchh-hh------hccCceEEECCccCCC----------------------------------C
Confidence 00000000 000000 00 0012357888887631 1
Q ss_pred eEEeecCCcEEEEEEEcCC--CCCCceeccCCCeEEEeeccCCCCCCCCCCcccCCCCceeeEEeCCCCEEEEEEEccCc
Q 011178 363 SVMAADFRGFAEVVFENPE--DTLQSWHIDGHNFFAVGMDGGEWTPASRLTYNLRDTISRCTVQVYPKSWTAVYVPLDNV 440 (491)
Q Consensus 363 ~~~~~~~g~~v~~~i~N~~--~~~HP~HlHG~~F~Vl~~g~g~~~~~~~~~~~~~~p~~rDTv~v~p~~~~~irf~adnp 440 (491)
..+.++.|++|+|+|.|.+ .+.||||||||.|+|++++ |.||||+.|+|+++++|+|+||||
T Consensus 970 ~~~~v~~G~~vr~~l~N~g~~~~~HpfHlHG~~F~vv~~~----------------p~~~DTv~v~pg~~~~v~~~ad~p 1033 (1065)
T 2j5w_A 970 QGLTMHVGDEVNWYLMGMGNEIDLHTVHFHGHSFQYKHRG----------------VYSSDVFDIFPGTYQTLEMFPRTP 1033 (1065)
T ss_dssp CCCEEETTCEEEEEEEECCSTTCCEEEEESSCCEEETTTT----------------CEEESEEEECTTCEEEEEECCCSC
T ss_pred ccEEeCCCCEEEEEEEeCCCCCcceeEEEcccEEEEEecC----------------CceeeEEEECCCCeEEEEEECCCC
Confidence 2256789999999999985 4689999999999998763 569999999999999999999999
Q ss_pred ceeeeeecchhhhhcceEEEEEEecCC
Q 011178 441 GMWNIRSENWARQYLGQQFYLRVYSSA 467 (491)
Q Consensus 441 G~w~~HCHil~H~d~GMm~~~~V~~~~ 467 (491)
|.|+||||+++|++.|||+.|+|.+.+
T Consensus 1034 G~w~~HCH~~~H~~~GM~~~~~V~~~~ 1060 (1065)
T 2j5w_A 1034 GIWLLHCHVTDHIHAGMETTYTVLQNE 1060 (1065)
T ss_dssp EEEEEEECCHHHHHTTCEEEEEEECCC
T ss_pred eeEEEEeCCHHHHhcCCcEEEEEecCc
Confidence 999999999999999999999998654
No 27
>3cg8_A Laccase; oxidoreductase, multicopper blue protein; HET: PG4; 2.68A {Streptomyces coelicolor}
Probab=100.00 E-value=1.2e-42 Score=347.98 Aligned_cols=217 Identities=18% Similarity=0.214 Sum_probs=176.1
Q ss_pred CcccCCCCeEEE--eeeEEEEEEecCCCCCeeeecccCCCCCCCCCCCCCCCCCCCCCCeEEEEEEeCC-----------
Q 011178 5 NHFSSLGCSLIT--HLYTHLVVLNFIYMAPLITLNGVQQRRNSWQDGVYGTNCPIPPGKNFTYVLQVKD----------- 71 (491)
Q Consensus 5 ~~~~~~G~~l~v--~d~v~i~~~N~l~~~~siH~HG~~~~~~~~~DG~~~~q~~i~PG~~~~Y~f~~~~----------- 71 (491)
.+...+||+|++ ||+|+|+|+|.++++++|||||+.+. .++||++.+||+|+||++|+|+|++.+
T Consensus 70 ~ng~~pGP~I~v~~Gd~v~v~~~N~l~~~~sih~HG~~~~--~~~DG~~~t~~~I~PG~~~~y~f~~~~pg~~~~g~~~~ 147 (343)
T 3cg8_A 70 GKASVPGPLIEVNEGDTLHIEFTNTMDVRASLHVHGLDYE--ISSDGTAMNKSDVEPGGTRTYTWRTHKPGRRDDGTWRP 147 (343)
T ss_dssp TCCBSSCCCEEEETTCEEEEEEEECSSSCBCCEESSSBCC--GGGSCCTTTTCSBCTTCEEEEEEECCCCEECTTSCEEC
T ss_pred CCCCccCCEEEEECCCEEEEEEEECCCCCeeEEecCcccC--CcCCCcccccccccCCCEEEEEEEeCCCCcccccccCC
Confidence 357789999987 48999999999999999999999975 579999988999999999999999942
Q ss_pred -CccceeEeCCc------cccccCCceeEEEEecCCCCCCCCCCCCCcceEEeeecccCCHHHHHHHHhcCCCCCCCceE
Q 011178 72 -QIGSYFYFPSL------AFHKAAGGYGGIKIASRPLIPVPFDPPAGDFTILAGDWYKKNHTDLKAILDSGSDLPFPDGL 144 (491)
Q Consensus 72 -~~Gt~wYH~H~------~~q~~~Gl~G~liV~~~~~~~~~~~~~~~e~~l~l~d~~~~~~~~~~~~~~~~~~~~~~~~~ 144 (491)
++||||||||. ..|+.+||+|+|||+++... . .|+|++|+++||
T Consensus 148 ~~~Gt~~YH~h~~~~~~~~~~~~~Gl~G~~iV~~~~~~--~---pd~e~~l~~~d~------------------------ 198 (343)
T 3cg8_A 148 GSAGYWHYHDHVVGTEHGTGGIRNGLYGPVIVRRKGDV--L---PDATHTIVFNDM------------------------ 198 (343)
T ss_dssp CSCEEEEEECSSSSSTTCHHHHHHTCEEEEEEECTTCC--C---CSEEEEEEEETT------------------------
T ss_pred CCceEEEEecCccccccchhhhhcCCeEEEEEecCCCC--C---CCceEEEEcccc------------------------
Confidence 35999999997 26899999999999987532 1 367888877664
Q ss_pred EEcCcCCCcceEEEeCCCEEEEEEEEcCCCCeEeEEEeCceeEEEEecCccCCCCccCeEEEcCCceEEEEEEeCCCCcc
Q 011178 145 VINGRGSNANTFTVDQGKTYRFRISNVGISTSINFRIQGHKMLLVEVEGTHTLQNTYDSLDIHLGQSYSVLVRADQPPQG 224 (491)
Q Consensus 145 ~vNG~~~~~~~~~v~~g~~~rlR~iN~~~~~~~~~~i~~~~~~via~DG~~~~p~~~~~l~l~pGeR~dv~v~~~~~~g~ 224 (491)
+|||+.
T Consensus 199 ~iNG~~-------------------------------------------------------------------------- 204 (343)
T 3cg8_A 199 TINNRK-------------------------------------------------------------------------- 204 (343)
T ss_dssp EETTCC--------------------------------------------------------------------------
T ss_pred eecccC--------------------------------------------------------------------------
Confidence 455543
Q ss_pred eEEEEEeeccCCCcceEEEEEecCCCCCCCCCCCCCCCccccchhhhhhhhccCCCCCCCCCCCCCCCCccccccceEEE
Q 011178 225 YYIVISTRFTSQVLSATSVLHYSNSAGSVSGPPPGGPTTQIDWSLEQARSLRRNLTASGPRPNPQGSYHYGLINTTHTIR 304 (491)
Q Consensus 225 ~~i~~~~~~~~~~~~~~ail~y~~~~~~~~~~~p~~p~~~~~~~~~~~~~~~~~l~~~~~~~~p~~~~~~~~~~~~~~~~ 304 (491)
.+..
T Consensus 205 --------------------------------~~~~-------------------------------------------- 208 (343)
T 3cg8_A 205 --------------------------------PHTG-------------------------------------------- 208 (343)
T ss_dssp --------------------------------TTCC--------------------------------------------
T ss_pred --------------------------------CCCC--------------------------------------------
Confidence 0000
Q ss_pred EeccccCcCCeEeEEEcCeeeeCCCCccccccccCCCCccccCCCCCCCCCCCcceeeeEEeecCCcEEEEEEEcCCCCC
Q 011178 305 LQNTAPTINGKQRYAVNSVSFIPADTPLKLADYFKIPGVFSVGSIPDNPTGGGAYLQTSVMAADFRGFAEVVFENPEDTL 384 (491)
Q Consensus 305 l~~~~~~~~~~~~~~iNg~~f~~~~~p~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~g~~v~~~i~N~~~~~ 384 (491)
| .+.++.|++|+|+|.|.+.+.
T Consensus 209 --------------------------~--------------------------------~l~v~~Ge~vri~l~N~g~~~ 230 (343)
T 3cg8_A 209 --------------------------P--------------------------------DFEATVGDRVEIVMITHGEYY 230 (343)
T ss_dssp --------------------------C--------------------------------CEEEETTCEEEEEEEEESSCC
T ss_pred --------------------------c--------------------------------cEEeCCCCEEEEEEEcCCccc
Confidence 0 023466899999999998889
Q ss_pred CceeccCCCeEEEeeccCCCCCCCCCCcccCCCCceeeEEeCCCCEEEEEEEc---cCcceeeeeecchhhhhcceEEEE
Q 011178 385 QSWHIDGHNFFAVGMDGGEWTPASRLTYNLRDTISRCTVQVYPKSWTAVYVPL---DNVGMWNIRSENWARQYLGQQFYL 461 (491)
Q Consensus 385 HP~HlHG~~F~Vl~~g~g~~~~~~~~~~~~~~p~~rDTv~v~p~~~~~irf~a---dnpG~w~~HCHil~H~d~GMm~~~ 461 (491)
||||||||.|+|+.. |.+.. ....+.|+||+.|.|++++.|+|++ ++||.|+||||+++|++.|||..|
T Consensus 231 HpfHlHGh~f~v~~~--G~~~~------p~~~~~~~Dtv~v~PG~~~~v~~~~~~~~~pG~w~~HCHi~~H~~~GM~g~~ 302 (343)
T 3cg8_A 231 HTFHMHGHRWADNRT--GILTG------PDDPSRVIDNKITGPADSFGFQIIAGEGVGAGAWMYHCHVQSHSDMGMVGLF 302 (343)
T ss_dssp EEEEETTCCEESSSS--SSCCS------TTCCCCEESEEEECTTCEEEEEEETTTTTCSEEEEEEECSHHHHHTTCEEEE
T ss_pred cccEecCcEEEEecc--CcccC------CCCcccceeeEEeCCCCEEEEEEEECCCCCCeeEEEeCCCHHHHhccCcEEE
Confidence 999999999999743 33321 1123578999999999999999995 899999999999999999999999
Q ss_pred EEecCCc
Q 011178 462 RVYSSAN 468 (491)
Q Consensus 462 ~V~~~~~ 468 (491)
.|.+++.
T Consensus 303 ~V~~~~~ 309 (343)
T 3cg8_A 303 LVKKPDG 309 (343)
T ss_dssp EEECTTS
T ss_pred EEecCCC
Confidence 9987654
No 28
>1kbv_A ANIA, major outer membrane protein PAN 1; ANIA[NO2-], oxidoreductase; 1.95A {Neisseria gonorrhoeae} SCOP: b.6.1.3 b.6.1.3 PDB: 1kbw_A
Probab=100.00 E-value=9.3e-43 Score=347.48 Aligned_cols=231 Identities=22% Similarity=0.295 Sum_probs=191.0
Q ss_pred CCCcccCCCCeEEEe--eeEEEEEEecCC--CCCeeeecccCCCCCCCCCCCCCCCCCCCCCCeEEEEEEeCCCccceeE
Q 011178 3 WMNHFSSLGCSLITH--LYTHLVVLNFIY--MAPLITLNGVQQRRNSWQDGVYGTNCPIPPGKNFTYVLQVKDQIGSYFY 78 (491)
Q Consensus 3 ~~~~~~~~G~~l~v~--d~v~i~~~N~l~--~~~siH~HG~~~~~~~~~DG~~~~q~~i~PG~~~~Y~f~~~~~~Gt~wY 78 (491)
|-.++..+||+|+|. |+|+|+|+|.++ .+++|||||+.+ +||++. +..|.||++|+|+|++ +++|||||
T Consensus 61 ~~~ng~~pgP~i~v~~Gd~v~v~~~N~~~~~~~~~ih~HG~~~-----~dG~~~-~~~i~PG~~~~y~f~~-~~~Gt~wy 133 (327)
T 1kbv_A 61 WTFDGDVPGRMIRVREGDTVEVEFSNNPSSTVPHNVDFHAATG-----QGGGAA-ATFTAPGRTSTFSFKA-LQPGLYIY 133 (327)
T ss_dssp EEETTBSSCCBEEEETTCEEEEEEEECTTCSSCBCCEETTCCS-----GGGGTT-TTCBCTTEEEEEEEEC-CSCEEEEE
T ss_pred EEECCccCCCeEEEeCCCEEEEEEEECCCCCCceeeEeCcccc-----CCCCCc-ceeecCCCEEEEEEEC-CCCeEEEE
Confidence 445677899999884 899999999997 589999999962 788875 2349999999999999 58999999
Q ss_pred eCCc---cccccCCceeEEEEecCCCCCCCCCCCCCcceEEeeecccCCHHH--------HHHHHhcCCCCCCCceEEEc
Q 011178 79 FPSL---AFHKAAGGYGGIKIASRPLIPVPFDPPAGDFTILAGDWYKKNHTD--------LKAILDSGSDLPFPDGLVIN 147 (491)
Q Consensus 79 H~H~---~~q~~~Gl~G~liV~~~~~~~~~~~~~~~e~~l~l~d~~~~~~~~--------~~~~~~~~~~~~~~~~~~vN 147 (491)
|||. ..|+++||+|+|||++++. .+.+|+|++|+++||+++.... ..... ...++.++||
T Consensus 134 H~h~~~~~~~~~~Gl~G~~iV~~~~~----~p~~d~e~~l~~~d~~~~~~~~~~g~~~~~~~~~~-----~~~~~~~~iN 204 (327)
T 1kbv_A 134 HCAVAPVGMHIANGMYGLILVEPKEG----LPKVDKEFYIVQGDFYTKGKKGAQGLQPFDMDKAV-----AEQPEYVVFN 204 (327)
T ss_dssp ECCCSSHHHHHHTTCEEEEEEECTTC----CCCCSEEEEEEEEEECBSSCTTCCEEECBCHHHHH-----HTCCSEEEET
T ss_pred EeCCCChhhhhhcceEEEEEEecCCC----CCCCceEEEEEeeeeeccCccccccccccChhHhc-----cCCCceEEEc
Confidence 9997 4799999999999998642 2245899999999999875210 11111 1357899999
Q ss_pred CcCCCc---ceEEEeCCCEEEEEEEEcCCCCeEeEEEeCceeEEEEecCccCCCCccCeEEEcCCceEEEEEEeCCCCcc
Q 011178 148 GRGSNA---NTFTVDQGKTYRFRISNVGISTSINFRIQGHKMLLVEVEGTHTLQNTYDSLDIHLGQSYSVLVRADQPPQG 224 (491)
Q Consensus 148 G~~~~~---~~~~v~~g~~~rlR~iN~~~~~~~~~~i~~~~~~via~DG~~~~p~~~~~l~l~pGeR~dv~v~~~~~~g~ 224 (491)
|+.... +.+++++|++|||||+|+|..+.+.|+|+||.|+||+.||.+++|..++++.|+||||+||+|++++ +|.
T Consensus 205 G~~~~~~~~~~l~v~~G~~vRlRliN~~~~~~~~~~l~Gh~f~vi~~DG~~~~p~~~d~l~l~pGer~dv~v~~~~-pG~ 283 (327)
T 1kbv_A 205 GHVGALTGDNALKAKAGETVRMYVGNGGPNLVSSFHVIGEIFDKVYVEGGKLINENVQSTIVPAGGSAIVEFKVDI-PGN 283 (327)
T ss_dssp TSTTTTSGGGCEEEETTEEEEEEEEEEESSCCEEEEEETCCBSEEEGGGSSCEECSBSEEEECTTEEEEEEEEECS-CEE
T ss_pred CcccCCCCceeEEeCCCCEEEEEEECCCCCCceeEEEeCCEEEEEEcCCCcCCCCceeEEEECCCCEEEEEEEeCC-CeE
Confidence 998421 5799999999999999999988999999999999999999999999999999999999999999994 799
Q ss_pred eEEEEEeeccCCCcceEEEEEecCCC
Q 011178 225 YYIVISTRFTSQVLSATSVLHYSNSA 250 (491)
Q Consensus 225 ~~i~~~~~~~~~~~~~~ail~y~~~~ 250 (491)
|+|++............|+|+|.+..
T Consensus 284 y~l~~h~~~~~~~~g~~a~l~~~g~~ 309 (327)
T 1kbv_A 284 YTLVDHSIFRAFNKGALGQLKVEGAE 309 (327)
T ss_dssp EEEEESSTHHHHHSSCEEEEEEESCC
T ss_pred EEEEeccccccccCCcEEEEEECCCC
Confidence 99998765431123468999998764
No 29
>3gdc_A Multicopper oxidase; beta sandwich, plasmid, oxidoreductase; 1.80A {Arthrobacter SP}
Probab=100.00 E-value=4e-41 Score=329.75 Aligned_cols=208 Identities=20% Similarity=0.234 Sum_probs=178.4
Q ss_pred CCCcccCCCCeEEEe--eeEEEEEEecCCCCCeeeecccCCCCCCCCCCCCC-CCCCCCCCCeEEEEEEeCCCccceeEe
Q 011178 3 WMNHFSSLGCSLITH--LYTHLVVLNFIYMAPLITLNGVQQRRNSWQDGVYG-TNCPIPPGKNFTYVLQVKDQIGSYFYF 79 (491)
Q Consensus 3 ~~~~~~~~G~~l~v~--d~v~i~~~N~l~~~~siH~HG~~~~~~~~~DG~~~-~q~~i~PG~~~~Y~f~~~~~~Gt~wYH 79 (491)
|-.++..+||+|++. |+|+|+|+|+|+.+++|||||++ .+++||+++ +||+|+||++++|+|++ +++||||||
T Consensus 57 ~~~ng~~pgP~i~~~~Gd~v~v~~~N~~~~~~~iH~HG~~---~~~~DG~p~~~~~~i~PG~~~~y~f~~-~~~Gt~~yH 132 (288)
T 3gdc_A 57 WSYNGRIPGPTLWAREGDALRIHFTNAGAHPHTIHFHGVH---RATMDGTPGIGAGSIAPGQSFTYEFDA-TPFGTHLYH 132 (288)
T ss_dssp EEETTBSSCCEEEEETTCEEEEEEEECSSSCBCCEESSCC---CGGGSCCTTSTTCSBCTTCEEEEEEEC-CSCEEEEEE
T ss_pred EEECCccCCCcEEEeCCCEEEEEEEeCCCCcccEEecccc---ccccCCCCCccceeECCCCEEEEEEEc-CCCccEEEE
Confidence 445677899999874 89999999999999999999997 357999999 99999999999999999 699999999
Q ss_pred CCcc---ccccCCceeEEEEecCCCCCCCCCCCCCcceEEeeecccCCHHHHHHHHhcCCCCCCCceEEEcCcCCC--cc
Q 011178 80 PSLA---FHKAAGGYGGIKIASRPLIPVPFDPPAGDFTILAGDWYKKNHTDLKAILDSGSDLPFPDGLVINGRGSN--AN 154 (491)
Q Consensus 80 ~H~~---~q~~~Gl~G~liV~~~~~~~~~~~~~~~e~~l~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~vNG~~~~--~~ 154 (491)
||.. .|+++||+|+|||++++..+ ..++|++|+++||+.++ ...++.++|||+.+. .+
T Consensus 133 ~H~~~~~~~~~~Gl~G~liV~~~~~~~----~~d~e~~l~~~d~~~~~-------------g~~~~~~~iNG~~~~~~~~ 195 (288)
T 3gdc_A 133 CHQSPLAPHIAKGLYGGFIVEPKEGRP----PADDEMVMVMNGYNTDG-------------GDDNEFYSVNGLPFHFMDF 195 (288)
T ss_dssp CCCSSHHHHHHTTCEEEEEEECSSCCC----CCSEEEEEEEEEECCSS-------------TTCCSEEEETTSTTHHHHS
T ss_pred ecCcchHHHHhCcCeEEEEEeCCccCC----CCcceEEEEEeeEecCC-------------CCCcceEEECcccccccCc
Confidence 9997 69999999999999876432 34799999999999872 124679999999842 24
Q ss_pred eEEEeCCCEEEEEEEEcCCCC-eEeEEEeCceeEEEEecCccCCCCccCeEEEcCCceEEEEEEeCCCCcceEEEEEee
Q 011178 155 TFTVDQGKTYRFRISNVGIST-SINFRIQGHKMLLVEVEGTHTLQNTYDSLDIHLGQSYSVLVRADQPPQGYYIVISTR 232 (491)
Q Consensus 155 ~~~v~~g~~~rlR~iN~~~~~-~~~~~i~~~~~~via~DG~~~~p~~~~~l~l~pGeR~dv~v~~~~~~g~~~i~~~~~ 232 (491)
.+++++|++||||++|++... .+.|+|+||.|+|++.++....+...+++.|.||||++|+++++ .+|.|.+.++..
T Consensus 196 ~l~v~~Ge~vr~~l~N~g~~~~~H~fHlhG~~f~v~~~g~~~~~~~~~Dtv~v~pg~~~~v~~~~~-~pG~~~~hCH~~ 273 (288)
T 3gdc_A 196 PVKVKQHELVRIHLINVLEYDPINSFHIHGNFFHYYPTGTMLTPSEYTDTISQVQGQRGILELRFP-YPGKFMFHAHKT 273 (288)
T ss_dssp CEEEETTCCEEEEEEECCCSSSEEEEEETTCCEEEEETTCCSSCSEEESEEEEETTCEEEEEECCC-SCEEEEEECSSH
T ss_pred ccccCCCCEEEEEEEeCCCCCcceeEEEcCCEEEEEcCCCccCCCceeeEEEeCCCceEEEEEECC-CCEEEEEEecCh
Confidence 799999999999999999654 79999999999999844433356778999999999999999999 689999887643
No 30
>2zoo_A Probable nitrite reductase; electron transfer, electron transport, heme, iron, binding, oxidoreductase, transport; HET: SUC HEM; 1.95A {Pseudoalteromonas haloplanktis}
Probab=100.00 E-value=1.2e-39 Score=338.94 Aligned_cols=231 Identities=22% Similarity=0.276 Sum_probs=191.4
Q ss_pred CCCcccCCCCeEEEe--eeEEEEEEecCC--CCCeeeecccCCCCCCCCCCCCCCCCCCCCCCeEEEEEEeCCCccceeE
Q 011178 3 WMNHFSSLGCSLITH--LYTHLVVLNFIY--MAPLITLNGVQQRRNSWQDGVYGTNCPIPPGKNFTYVLQVKDQIGSYFY 78 (491)
Q Consensus 3 ~~~~~~~~G~~l~v~--d~v~i~~~N~l~--~~~siH~HG~~~~~~~~~DG~~~~q~~i~PG~~~~Y~f~~~~~~Gt~wY 78 (491)
|..++..+||+|++. |+|+|+|+|.++ .+++|||||+.+ +||++.+ .+|.||++++|+|++ +++|||||
T Consensus 51 ~~~ng~~pgp~i~v~~Gd~v~v~~~N~l~~~~~~~iH~HG~~~-----~dG~~~~-~~i~pg~~~~y~f~~-~~~Gt~~y 123 (442)
T 2zoo_A 51 WSFGETVPGSFIRVREGDEIEFNLSNHPSSKMPHNIDLHAVTG-----PGGGAES-SFTAPGHTSTFNFKA-LNPGLYIY 123 (442)
T ss_dssp EEETTBSSCCBEEEETTCEEEEEEEECTTCSSCBCCEETTCCS-----GGGGGGG-CCBCTTCEEEEEEEC-CSCEEEEE
T ss_pred EEECCcCCCCcEEEeCCCEEEEEEEECCCCCCCCCEEecCCcC-----CCCCCcc-EEECCCCEEEEEEEc-CCCeEEEE
Confidence 445677789999884 899999999986 499999999973 6888762 259999999999999 58999999
Q ss_pred eCCc---cccccCCceeEEEEecCCCCCCCCCCCCCcceEEeeecccCCHHH--------HHHHHhcCCCCCCCceEEEc
Q 011178 79 FPSL---AFHKAAGGYGGIKIASRPLIPVPFDPPAGDFTILAGDWYKKNHTD--------LKAILDSGSDLPFPDGLVIN 147 (491)
Q Consensus 79 H~H~---~~q~~~Gl~G~liV~~~~~~~~~~~~~~~e~~l~l~d~~~~~~~~--------~~~~~~~~~~~~~~~~~~vN 147 (491)
|||. ..|+.+||+|+|||++++.. +.+|+|++|+++||+++.... ... + ....+++++||
T Consensus 124 H~H~~~~~~~~~~Gl~G~~iv~~~~~~----~~~d~e~~l~l~d~~~~~~~~~~~~~~~~~~~-~----~~~~~~~~liN 194 (442)
T 2zoo_A 124 HCATAPVGMHIANGMYGLILVEPKEGL----APVDREYYLVQGDFYTKGEFGEAGLQPFDMAK-A----IDEDADYVVFN 194 (442)
T ss_dssp ECCCSSHHHHHHTTCEEEEEEECTTCC----CCCSEEEEEEEEEECBSSCTTCCEEECBCHHH-H----HTTCCSEEEET
T ss_pred ecCCCChHHHHhCccEEEEEEeCCCCC----CCCCceEEEEeeeeeccCcccccccccCChhH-h----ccCCCCEEEEC
Confidence 9975 48999999999999986532 245899999999999875310 111 1 12467899999
Q ss_pred CcCCCc---ceEEEeCCCEEEEEEEEcCCCCeEeEEEeCceeEEEEecCccCCCCccCeEEEcCCceEEEEEEeCCCCcc
Q 011178 148 GRGSNA---NTFTVDQGKTYRFRISNVGISTSINFRIQGHKMLLVEVEGTHTLQNTYDSLDIHLGQSYSVLVRADQPPQG 224 (491)
Q Consensus 148 G~~~~~---~~~~v~~g~~~rlR~iN~~~~~~~~~~i~~~~~~via~DG~~~~p~~~~~l~l~pGeR~dv~v~~~~~~g~ 224 (491)
|+.... +.|++++|++|||||+|+|....+.|+|+||.|+||+.||.+++|..++++.|.||||+||+|+++ .+|.
T Consensus 195 G~~~~~~~~~~l~v~~G~~vrlrliN~~~~~~~~~~i~g~~~~vi~~DG~~~~p~~~~~~~l~pg~r~~v~v~~~-~~G~ 273 (442)
T 2zoo_A 195 GSVGSTTDENSLTAKVGETVRLYIGNGGPNLVSSFHVIGEIFDTVYVEGGSLKNHNVQTTLIPAGGAAIVEFKVE-VPGT 273 (442)
T ss_dssp TSTTTTSGGGCEEEETTCEEEEEEEEEESSCCEEEEEETCCBSEEEGGGSSCEECSBSEEEECTTEEEEEEEECC-SCEE
T ss_pred CCcCCCCCCCceEeCCCCEEEEEEEeCCCCCceeeEEcCCEEEEEecCCccCCCccceEEEECCCeeEEEEEEcC-CCCe
Confidence 998421 689999999999999999988899999999999999999999999999999999999999999999 4799
Q ss_pred eEEEEEeeccCCCcceEEEEEecCCC
Q 011178 225 YYIVISTRFTSQVLSATSVLHYSNSA 250 (491)
Q Consensus 225 ~~i~~~~~~~~~~~~~~ail~y~~~~ 250 (491)
|++++............++|+|.+..
T Consensus 274 y~~~~~~~~~~~~~g~~a~l~v~~~~ 299 (442)
T 2zoo_A 274 FILVDHSIFRAFNKGALAMLKVEGPD 299 (442)
T ss_dssp EEEEESSTHHHHTTSCEEEEEEESCC
T ss_pred EEEEecccccccccCceEEEEecCCC
Confidence 99998764321123568999998765
No 31
>1sdd_B Coagulation factor V; copper-binding protein, cofactor, blood clottin; HET: NAG NDG; 2.80A {Bos taurus} SCOP: b.6.1.3 b.6.1.3 b.18.1.2 b.18.1.2
Probab=100.00 E-value=3.3e-39 Score=350.37 Aligned_cols=232 Identities=15% Similarity=0.175 Sum_probs=171.6
Q ss_pred cccCCCCeEEE--eeeEEEEEEecCCCCCeeeecccCCCCCCCCCCCCC-C--------CCCCCCCCeEEEEEEeCCC--
Q 011178 6 HFSSLGCSLIT--HLYTHLVVLNFIYMAPLITLNGVQQRRNSWQDGVYG-T--------NCPIPPGKNFTYVLQVKDQ-- 72 (491)
Q Consensus 6 ~~~~~G~~l~v--~d~v~i~~~N~l~~~~siH~HG~~~~~~~~~DG~~~-~--------q~~i~PG~~~~Y~f~~~~~-- 72 (491)
++..|||+|++ ||+|+|+|+|+|+++++|||||++++ ++|||+++ + ||+|+||++|+|+|+++++
T Consensus 63 ~~~~pGP~I~~~~Gd~v~v~~~N~l~~~~siH~HGl~~~--~~~DG~~~~~~~~~~~~~~~~I~PG~~~tY~f~~~~~~g 140 (647)
T 1sdd_B 63 HLGILGPVIRAEVDDVIQVRFKNLASRPYSLHAHGLSYE--KSSEGKTYEDDSPEWFKEDNAIQPNKTYTYVWHATTRSG 140 (647)
T ss_dssp GGTTSCCCEEEETTCEEEEEECCCSSSCBCCEEETCC-----------------------CCBCTTCCEECCEECCTTTS
T ss_pred ccCCcCceEEEeCCCEEEEEEEECCCCceEEecCcceeC--CCCCCccccCCCCcccccCcccCCCCeEEEEEECCcccC
Confidence 56788999987 48999999999999999999999985 46999997 6 9999999999999999754
Q ss_pred ---cc----ceeEeCCcc--ccccCCceeEEEEecCCCCCC--CCCCCCCcceEEee------ecccCCHHHHH-HHHhc
Q 011178 73 ---IG----SYFYFPSLA--FHKAAGGYGGIKIASRPLIPV--PFDPPAGDFTILAG------DWYKKNHTDLK-AILDS 134 (491)
Q Consensus 73 ---~G----t~wYH~H~~--~q~~~Gl~G~liV~~~~~~~~--~~~~~~~e~~l~l~------d~~~~~~~~~~-~~~~~ 134 (491)
+| |||||||.+ .|+++||+|+|||++++.... ..+..++|++|+|+ ||+++...... ..++
T Consensus 141 p~~~G~~c~T~wYHsH~~~~~q~~~GL~G~lIV~~~~~~~~~~~~~~~~~e~~l~l~~~d~~~~w~~~~~~~~~~~~~~- 219 (647)
T 1sdd_B 141 PENPGSACRAWAYYSAVNPEKDIHSGLIGPLLICRKGTLDKETNMPVDMREFVLLFMVFDEKKSWYYDKKPTRSWRRAS- 219 (647)
T ss_dssp CCSSSCSEEEEEEECCSSHHHHHTTTCEEEEEEECTTSSCTTSCCCSSCCEEEEEEEEEEGGGSSCCC------------
T ss_pred CCCCCCCceEEEEccCCCCcccccccCccCEEEeeCCCcccccCCCCcceeEEEEEEeecCccccccccCcccccccCC-
Confidence 57 999999996 799999999999999754211 12234689999999 78877543210 0011
Q ss_pred CCCCCCCceEEEcCcCCCcceEEEeCCCEEEEEEEEcCCCC-eEeEEEeCceeEEEEecCccCCCCccCeEEEcCCceEE
Q 011178 135 GSDLPFPDGLVINGRGSNANTFTVDQGKTYRFRISNVGIST-SINFRIQGHKMLLVEVEGTHTLQNTYDSLDIHLGQSYS 213 (491)
Q Consensus 135 ~~~~~~~~~~~vNG~~~~~~~~~v~~g~~~rlR~iN~~~~~-~~~~~i~~~~~~via~DG~~~~p~~~~~l~l~pGeR~d 213 (491)
......++.++|||+.+..|.+++++|++|||||+|++... .+.|+++||.|+|++.||. .++++.|+||||+|
T Consensus 220 ~~~~~~~~~~~iNG~~~~~p~l~v~~G~~vrlrliN~~~~~~~h~~hlhG~~f~vi~~d~~-----~~d~v~l~pg~r~~ 294 (647)
T 1sdd_B 220 SEVKNSHEFHAINGMIYNLPGLRMYEQEWVRLHLLNLGGSRDIHVVHFHGQTLLENGTQQH-----QLGVWPLLPGSFKT 294 (647)
T ss_dssp ----CCCEEEEETTBSSCCCCCEEETTCEEEEEEEECCCTTCCEEEEETTCCEEECSSSCE-----EESSEEECTTEEEE
T ss_pred cchhhcCceeccCCEecCCCCeEEcCCCEEEEEEEeCCCCCcceeEEEcCcEEEEecCCCc-----ccceEEECCCeEEE
Confidence 11234578999999984358999999999999999999864 8999999999999999864 57999999999999
Q ss_pred EEEEeCCCCcceEEEEEeeccCCCcceEEEEEec
Q 011178 214 VLVRADQPPQGYYIVISTRFTSQVLSATSVLHYS 247 (491)
Q Consensus 214 v~v~~~~~~g~~~i~~~~~~~~~~~~~~ail~y~ 247 (491)
|+|++++ +|.|.+.++..... .....+++.+.
T Consensus 295 v~~~~~~-pG~w~~hch~~~h~-~~Gm~~~~~V~ 326 (647)
T 1sdd_B 295 LEMKASK-PGWWLLDTEVGEIQ-RAGMQTPFLIV 326 (647)
T ss_dssp EEEECCS-SEEEEEECCCHHHH-TTTCEEEEEEE
T ss_pred EEEEecc-ceEeecccCccccc-ccccccceeee
Confidence 9999994 79988877753211 12334555554
No 32
>1oe1_A Dissimilatory copper-containing nitrite reductase; denitrification; HET: PG4; 1.04A {Alcaligenes xylosoxidans} SCOP: b.6.1.3 b.6.1.3 PDB: 1oe3_A* 2xwz_A* 2vn3_A 2zon_A* 1haw_A 1hau_A* 2vm4_A* 2vw4_A* 2vw6_A* 2vw7_A* 2vm3_A* 1oe2_A* 2jl0_A* 2xx1_A 2xxg_A* 2xxf_A* 1gs8_A 1wa1_X* 1wa2_X* 2jl3_A* ...
Probab=100.00 E-value=1.4e-38 Score=319.16 Aligned_cols=236 Identities=20% Similarity=0.209 Sum_probs=179.4
Q ss_pred CCCcccCCCCeEEE--eeeEEEEEEecCCCCCeeeecccCCCCCCCCCCCCC-CCCCCCCCCeEEEEEEeCCCccceeEe
Q 011178 3 WMNHFSSLGCSLIT--HLYTHLVVLNFIYMAPLITLNGVQQRRNSWQDGVYG-TNCPIPPGKNFTYVLQVKDQIGSYFYF 79 (491)
Q Consensus 3 ~~~~~~~~G~~l~v--~d~v~i~~~N~l~~~~siH~HG~~~~~~~~~DG~~~-~q~~i~PG~~~~Y~f~~~~~~Gt~wYH 79 (491)
|..++..+||+|++ ||+|+|+|+|++ +++||||+++.+.+++||... ++ |+||++|+|+|++ +++||||||
T Consensus 56 ~~~ng~~pgP~i~v~~Gd~v~v~~~N~~---~~~~~h~~~~h~~~~~~~~~~~~~--i~pG~~~~y~f~~-~~~Gt~~yH 129 (336)
T 1oe1_A 56 MTFNGSMPGPTLVVHEGDYVQLTLVNPA---TNAMPHNVDFHGATGALGGAKLTN--VNPGEQATLRFKA-DRSGTFVYH 129 (336)
T ss_dssp EEETTBSSCCCEEEETTCEEEEEEEECT---TCCSCBCCEETTSCSGGGGGGGCC--BCTTEEEEEEEEC-CSCEEEEEE
T ss_pred EEECCccCCCeEEEcCCCEEEEEEEcCC---CCCccccceECCCCCCCCCcceEE--eCCCCEEEEEEEC-CCCeEEEEe
Confidence 44567778999987 489999999997 456777777666556777665 65 9999999999999 589999999
Q ss_pred CCcc----ccccCCceeEEEEecCCCCC----CCCCCCCCcceEEeeecccCC--HHHH----------HHHHhcCCCCC
Q 011178 80 PSLA----FHKAAGGYGGIKIASRPLIP----VPFDPPAGDFTILAGDWYKKN--HTDL----------KAILDSGSDLP 139 (491)
Q Consensus 80 ~H~~----~q~~~Gl~G~liV~~~~~~~----~~~~~~~~e~~l~l~d~~~~~--~~~~----------~~~~~~~~~~~ 139 (491)
||.+ .|+++||+|+|||++++..+ .+. .+|+|++|+++||++.. .+.+ ...++. ....
T Consensus 130 ~h~~~~~~~~~~~Gl~G~liV~~~~~~~~~~~~~~-~~D~e~~l~~~D~~~~~~~~g~~~~~~~~~~~~~~~~~~-~~~~ 207 (336)
T 1oe1_A 130 CAPEGMVPWHVVSGMSGTLMVLPRDGLKDPQGKPL-HYDRAYTIGEFDLYIPKGPDGKYKDYATLAESYGDTVQV-MRTL 207 (336)
T ss_dssp CCCTTCHHHHHHTTCEEEEEEECTTCCBCTTSCBC-CCSEEEEEEEEEECCCBCTTSSBCCCSSTGGGHHHHHHH-HHTT
T ss_pred cCCCCchhHHHhCCCeEEEEEecCcCCcccccCcc-cCCceeEeeeeeeeeccccCCceeecccccccccchhhH-hhcC
Confidence 9985 69999999999999865321 122 46899999999999842 1111 000000 0134
Q ss_pred CCceEEEcCcCCC---cceEEEeCCCEEEEEEEEcCCCCeEeEE-EeCceeEEEEecCccCCCCc--cCeEEEcCCceEE
Q 011178 140 FPDGLVINGRGSN---ANTFTVDQGKTYRFRISNVGISTSINFR-IQGHKMLLVEVEGTHTLQNT--YDSLDIHLGQSYS 213 (491)
Q Consensus 140 ~~~~~~vNG~~~~---~~~~~v~~g~~~rlR~iN~~~~~~~~~~-i~~~~~~via~DG~~~~p~~--~~~l~l~pGeR~d 213 (491)
.++.++|||+... .+.++|++|++||| +|++..+.+.|+ |++|.|+|++ ||.+++|.. ++++.|+||||+|
T Consensus 208 ~~~~~liNG~~~~~~~~~~l~v~~GervRl--in~~~~~~~~~~~i~gh~~~Vi~-DG~~~~p~~~~~dtv~i~pGer~d 284 (336)
T 1oe1_A 208 TPSHIVFNGKVGALTGANALTAKVGETVLL--IHSQANRDTRPHLIGGHGDWVWE-TGKFANPPQRDLETWFIRGGSAGA 284 (336)
T ss_dssp CCSEEEETTSTTTTSGGGCEEEETTCEEEE--EEEESSSCBCEEETTCCEEEEET-TCCTTSCCEEEESBCCBCTTEEEE
T ss_pred CCCEEEECCeeccCCCCcceEcCCCCEEEE--EecCCCCccceEEECCcCceEeC-CCcCcCCccccceEEEECCCCcEE
Confidence 6789999999842 38899999997765 677766666655 5999999997 999997753 5899999999999
Q ss_pred EEEEeCCCCcceEEEEEeeccCCCcceEEEEEecCCC
Q 011178 214 VLVRADQPPQGYYIVISTRFTSQVLSATSVLHYSNSA 250 (491)
Q Consensus 214 v~v~~~~~~g~~~i~~~~~~~~~~~~~~ail~y~~~~ 250 (491)
|+|++++ +|+|++.++...........|+++|.+..
T Consensus 285 vlv~~~~-pG~y~~~~h~~~~~~~~G~~~~~~V~~~~ 320 (336)
T 1oe1_A 285 ALYTFKQ-PGVYAYLNHNLIEAFELGAAGHIKVEGKW 320 (336)
T ss_dssp EEEECCS-CEEEEEEESSHHHHHTTSCEEEEEEESCC
T ss_pred EEEEcCC-CceEEEEechhhccccCCCeEEEEECCCC
Confidence 9999995 79999998864321123567899998655
No 33
>1mzy_A Copper-containing nitrite reductase; mutant M182T, gating mechanism, electron oxidoreductase; 1.46A {Rhodobacter sphaeroides} SCOP: b.6.1.3 b.6.1.3 PDB: 1mzz_A 1n70_A 1zv2_A 2a3t_A 2dws_A 2dwt_A 2dy2_A
Probab=100.00 E-value=1.6e-37 Score=310.97 Aligned_cols=236 Identities=20% Similarity=0.195 Sum_probs=179.0
Q ss_pred CCCcccCCCCeEEEe--eeEEEEEEecCCCCCeeeecccCCCCCCCCCCCCC-CCCCCCCCCeEEEEEEeCCCccceeEe
Q 011178 3 WMNHFSSLGCSLITH--LYTHLVVLNFIYMAPLITLNGVQQRRNSWQDGVYG-TNCPIPPGKNFTYVLQVKDQIGSYFYF 79 (491)
Q Consensus 3 ~~~~~~~~G~~l~v~--d~v~i~~~N~l~~~~siH~HG~~~~~~~~~DG~~~-~q~~i~PG~~~~Y~f~~~~~~Gt~wYH 79 (491)
|-.++..+||+|++. |+|+|+|+|+ .+++||||+++.+...+||.+. ++ |+||++|+|+|++ +++||||||
T Consensus 55 ~~~ng~~pgP~i~~~~Gd~v~v~~~N~---~~~~h~Hg~~~~~~~~~~~~~~~~~--i~PG~~~~y~f~~-~~~Gt~~yH 128 (333)
T 1mzy_A 55 MTFDGSIPGPLMIVHEGDYVELTLINP---PENTMPHNIDFHAATGALGGGGLTL--INPGEKVVLRFKA-TRAGAFVYH 128 (333)
T ss_dssp EEETTBSSCCEEEEETTCEEEEEEEEC---TTCCSCBCCEETTSCSGGGGGGGCC--BCTTEEEEEEEEC-CSCEEEEEE
T ss_pred EEECCccCCCcEEecCCCEEEEEEEEC---CCCcccccceecCCCCCCCCCceeE--eCCCCEEEEEEEC-CCCEEEEEe
Confidence 344667789999874 8999999999 6899999999876544555555 54 9999999999999 589999999
Q ss_pred CCcc-----ccccCCceeEEEEecCCCCC----CCCCCCCCcceEEeeecccCC--HHHH----------HHHHhcCCCC
Q 011178 80 PSLA-----FHKAAGGYGGIKIASRPLIP----VPFDPPAGDFTILAGDWYKKN--HTDL----------KAILDSGSDL 138 (491)
Q Consensus 80 ~H~~-----~q~~~Gl~G~liV~~~~~~~----~~~~~~~~e~~l~l~d~~~~~--~~~~----------~~~~~~~~~~ 138 (491)
||.+ .|+++||+|+|||++++..+ .++ .+|+|++|+++||++.. ...+ ...+.. ...
T Consensus 129 ~h~~~~~~~~~~~~Gl~G~~iV~~~~~~~~~~~~p~-~~d~e~~l~l~D~~~~~~~~g~~~~~~~~~~~~~~~~~~-~~~ 206 (333)
T 1mzy_A 129 CAPGGPMIPWHVVSGMAGCIMVLPRDGLKDHEGKPV-RYDTVYYIGESDHYIPKDEDGTYMRFSDPSEGYEDMVAV-MDT 206 (333)
T ss_dssp CCCSTTHHHHHHHTTCEEEEEEECTTCCBCTTSCBC-CCSEEEEEEEEEECCCBCTTSCBCCCSSHHHHHHHHHHH-HTT
T ss_pred ecCCcccchhhhhCCCEEEEEEccCcCccccccCCC-ccchheeeeeeeeccCccccccccccccccccccchhHH-hhc
Confidence 9987 69999999999999765321 122 45899999999999831 1111 000110 012
Q ss_pred CCCceEEEcCcCCC---cceEEEeCCCEEEEEEEEcCCCCeEeE-EEeCceeEEEEecCccCCCC--ccCeEEEcCCceE
Q 011178 139 PFPDGLVINGRGSN---ANTFTVDQGKTYRFRISNVGISTSINF-RIQGHKMLLVEVEGTHTLQN--TYDSLDIHLGQSY 212 (491)
Q Consensus 139 ~~~~~~~vNG~~~~---~~~~~v~~g~~~rlR~iN~~~~~~~~~-~i~~~~~~via~DG~~~~p~--~~~~l~l~pGeR~ 212 (491)
..++.++|||+... .+.++|++|++||||.+|++. .+.| .+++|.++|++ ||.++++. .++++.|+||||+
T Consensus 207 ~~~~~~~ING~~~~~~~~~~l~v~~Ger~Rl~n~~~~~--~~~~h~i~~h~~~Vi~-dG~~~~~p~~~~dtv~l~pGer~ 283 (333)
T 1mzy_A 207 LIPSHIVFNGAVGALTGEGALKAKVGDNVLFVHSQPNR--DSRPHLIGGHGDLVWE-TGKFHNAPERDLETWFIRGGTAG 283 (333)
T ss_dssp TCCSEEEETTSTTTTSGGGCEEEETTCEEEEEEEESSS--CBCEEEETCCEEEEET-TCCTTSCCEEEESBCCBCTTEEE
T ss_pred cCCcEEEECCcccccCCCcceEecCCCEEEEEECCCCC--ccccEEECCCCeEEEe-CCcccCCCccCcceEEECCCceE
Confidence 56789999999742 367999999988877666553 3333 37889999999 99998653 3799999999999
Q ss_pred EEEEEeCCCCcceEEEEEeeccCCCcceEEEEEecCCC
Q 011178 213 SVLVRADQPPQGYYIVISTRFTSQVLSATSVLHYSNSA 250 (491)
Q Consensus 213 dv~v~~~~~~g~~~i~~~~~~~~~~~~~~ail~y~~~~ 250 (491)
||+|++++ +|+|++.++...........++++|.+..
T Consensus 284 ~v~v~a~~-pG~y~~~ch~~~h~~~~Gm~~~~~v~~~~ 320 (333)
T 1mzy_A 284 AALYKFLQ-PGVYAYVNHNLIEAVHKGATAHVLVEGEW 320 (333)
T ss_dssp EEEEECCS-CEEEEEEESSHHHHHTTCCEEEEEEESCC
T ss_pred EEEEEcCC-CEEEEEecChhhhHhhCCCEEEEEEcCCC
Confidence 99999995 79999998865321124577899998654
No 34
>1sdd_A Coagulation factor V; copper-binding protein, cofactor, blood clottin; HET: NAG NDG; 2.80A {Bos taurus} SCOP: b.6.1.3 b.6.1.3
Probab=100.00 E-value=2.5e-39 Score=319.75 Aligned_cols=204 Identities=12% Similarity=0.144 Sum_probs=151.5
Q ss_pred cCCCCeEEE--eeeEEEEEEecCCCCCeeeecccCC----CCCCCCCCCCC-C--CCCCCCCCeEEEEEEeCCC------
Q 011178 8 SSLGCSLIT--HLYTHLVVLNFIYMAPLITLNGVQQ----RRNSWQDGVYG-T--NCPIPPGKNFTYVLQVKDQ------ 72 (491)
Q Consensus 8 ~~~G~~l~v--~d~v~i~~~N~l~~~~siH~HG~~~----~~~~~~DG~~~-~--q~~i~PG~~~~Y~f~~~~~------ 72 (491)
..+||+|++ ||+|+|+|+|+|++++||||||+++ .+.+++||+++ + ||+|+||++|+|+|+++++
T Consensus 56 ~~pGP~I~v~~Gd~v~v~~~N~l~~~~siH~HGl~~~~~~dG~~~~dg~~~~~~~~~~I~PG~~~~Y~f~~~~~~gp~~~ 135 (306)
T 1sdd_A 56 GLLGPTLYAEVGDIMKVHFKNKAHKPLSIHAQGIKYSKFSEGASYSDHTLPMEKMDDAVAPGQEYTYEWIISEHSGPTHD 135 (306)
T ss_dssp CSCCCCEEEETTCEEEEEEEECSSSCBCCEEESSCCCTTTSCCCSCCCCCHHHHTTTCBCTTCEEEEEEECCGGGSCCSS
T ss_pred CccCCEEEEeCCCEEEEEEEECCCCcccEeecceecccccCCCccCCCCcccccCCCccCCCCeEEEEEEeCCccCCCCC
Confidence 568888887 4888999999999999999999994 34455555543 2 7999999999999999644
Q ss_pred ---ccceeEeCCccc--cccCCceeEEEEecCCCC---CCCCCCCCCcceEEeeecccCCHHHHHHHHhcCCCCCCCceE
Q 011178 73 ---IGSYFYFPSLAF--HKAAGGYGGIKIASRPLI---PVPFDPPAGDFTILAGDWYKKNHTDLKAILDSGSDLPFPDGL 144 (491)
Q Consensus 73 ---~Gt~wYH~H~~~--q~~~Gl~G~liV~~~~~~---~~~~~~~~~e~~l~l~d~~~~~~~~~~~~~~~~~~~~~~~~~ 144 (491)
+||||||||... |+++||+|+|||+++... +.+. ..|+|++|+++||..+.. .....++.+
T Consensus 136 d~~~GT~wYHsH~~~~~q~~~GL~G~liV~~~~~~~~~~~~~-~~d~e~~l~~~d~d~~~~----------~~~~~~~~~ 204 (306)
T 1sdd_A 136 DPPCLTHIYYSYVNLVEDFNSGLIGPLLICKKGTLTEDGTQK-MFEKQHVLMFAVFDESKS----------WNQTSSLMY 204 (306)
T ss_dssp SCSEEEEEEECCSSSHHHHHTTCCEEEEEECTTCBCTTSSBS-SSCCCCCCBCCEEETTSS----------SSCCCCEEE
T ss_pred CCCceEEEEeccCCchhhhccCceEEEEEccCCCCCccCCcC-cccceEEEEEEecccccc----------cccCCCcce
Confidence 379999999875 889999999999987431 1222 458999999999853211 012346789
Q ss_pred EEcCcCC-CcceEEEeCCCEEEEEEEEcCCC-CeEeEEEeCceeEEEEecCccCCCCccCeEEEcCCceEEEEEEeCCCC
Q 011178 145 VINGRGS-NANTFTVDQGKTYRFRISNVGIS-TSINFRIQGHKMLLVEVEGTHTLQNTYDSLDIHLGQSYSVLVRADQPP 222 (491)
Q Consensus 145 ~vNG~~~-~~~~~~v~~g~~~rlR~iN~~~~-~~~~~~i~~~~~~via~DG~~~~p~~~~~l~l~pGeR~dv~v~~~~~~ 222 (491)
+|||+.+ ..|.+++++|++|||||+|+|.. ..+.|+++||.|.+ ||. ..+++.|.||||+|++|+++ .+
T Consensus 205 ~ING~~~~~~p~l~v~~G~~vrlrliN~g~~~~~h~~hlhG~~~~~---dG~-----~~dtv~l~pger~~v~~~~~-~p 275 (306)
T 1sdd_A 205 TVNGYVNGTMPDITVCAHDHISWHLIGMSSGPELFSIHFNGQVLEQ---NHH-----KISAITLVSATSTTANMTVS-PE 275 (306)
T ss_dssp CSSSCCSSCCCCCCCCCC------BBCCCSSSCEECCBCSSTTCEE---TTE-----ECSCCCEETTCCBC---------
T ss_pred eeCCEecCCCcceEEcCCCEEEEEEEeCCCCCccEEEEECCcEeee---CCE-----EcceEEECCCcEEEEEEEcC-CC
Confidence 9999984 23889999999999999999986 67889999999885 884 47899999999999999998 57
Q ss_pred cceEEEEEe
Q 011178 223 QGYYIVIST 231 (491)
Q Consensus 223 g~~~i~~~~ 231 (491)
|.|++.++.
T Consensus 276 G~~~~hch~ 284 (306)
T 1sdd_A 276 GRWTIASLI 284 (306)
T ss_dssp CCCCCBCCS
T ss_pred eEEEEEeCC
Confidence 999887764
No 35
>2bw4_A Copper-containing nitrite reductase; oxidoreductase, denitrification, catalysis, enzyme mechanism, nitrate assimilation; 0.90A {Achromobacter cycloclastes} SCOP: b.6.1.3 b.6.1.3 PDB: 1nib_A 1nia_A 1nid_A 1nie_A 1nic_A 1nif_A 2bw5_A 2bwd_A 2bwi_A 2nrd_A 2y1a_A 1kcb_A 1rzp_A* 1rzq_A 2avf_A 1as6_A 1aq8_A 1as7_A 1as8_A 2afn_A ...
Probab=100.00 E-value=6.7e-38 Score=314.72 Aligned_cols=236 Identities=17% Similarity=0.180 Sum_probs=176.6
Q ss_pred CCCcccCCCCeEEEe--eeEEEEEEecCCCCCeeeecccCCCCCCCCCCCCC-CCCCCCCCCeEEEEEEeCCCccceeEe
Q 011178 3 WMNHFSSLGCSLITH--LYTHLVVLNFIYMAPLITLNGVQQRRNSWQDGVYG-TNCPIPPGKNFTYVLQVKDQIGSYFYF 79 (491)
Q Consensus 3 ~~~~~~~~G~~l~v~--d~v~i~~~N~l~~~~siH~HG~~~~~~~~~DG~~~-~q~~i~PG~~~~Y~f~~~~~~Gt~wYH 79 (491)
|..++..+||+|++. |+|+|+|+|.+ +++||||+++.+....||... ++ |.||++|+|+|++. ++||||||
T Consensus 62 ~~~ng~~pgP~i~v~~Gd~v~v~~~N~~---~~~~~hg~~~~~~~~~~~~~~~~~--i~PG~~~~y~~~~~-~~Gt~wyH 135 (340)
T 2bw4_A 62 MTFNGSVPGPLMVVHENDYVELRLINPD---TNTLLHNIDFHAATGALGGGALTQ--VNPGEETTLRFKAT-KPGVFVYH 135 (340)
T ss_dssp EEETTBSSCCEEEEETTCEEEEEEEECT---TCCSCBCCEETTSCSGGGGGGGCC--BCTTEEEEEEEECC-SCEEEEEE
T ss_pred EEECCCCCCCcEEEcCCCEEEEEEEeCC---CCCccCcceeCCcCCCCCCccceE--eCCCCEEEEEEECC-CCeEEEEE
Confidence 345667889999874 89999999998 789999998766544444443 54 99999999999995 79999999
Q ss_pred CCcc----ccccCCceeEEEEecCCCCC----CCCCCCCCcceEEeeecccC--CHHHH----------HHHHhcCCCCC
Q 011178 80 PSLA----FHKAAGGYGGIKIASRPLIP----VPFDPPAGDFTILAGDWYKK--NHTDL----------KAILDSGSDLP 139 (491)
Q Consensus 80 ~H~~----~q~~~Gl~G~liV~~~~~~~----~~~~~~~~e~~l~l~d~~~~--~~~~~----------~~~~~~~~~~~ 139 (491)
||.+ .|+++||+|+|||++++..+ .+. .+|+|++|+++||++. .++.+ ...++. ....
T Consensus 136 ~h~~~~~~~~~~~Gl~G~~iV~~~~~~~~~~~~p~-~~d~e~~l~l~D~~~~~~~~g~~~~~~~~~~~~~~~~~~-~~~~ 213 (340)
T 2bw4_A 136 CAPEGMVPWHVTSGMNGAIMVLPRDGLKDEKGQPL-TYDKIYYVGEQDFYVPKDEAGNYKKYETPGEAYEDAVKA-MRTL 213 (340)
T ss_dssp CCCTTCHHHHHHTTCEEEEEEECTBCEECTTSCEE-CCSEEEEEEEEEECCCBCTTSCBCCCCSHHHHHHHHHHH-HHTT
T ss_pred cCCCCchhhHHhCcCEEEEEEccCcCcccccCCCc-CcceeEEEeeeeeeeccccCCcccccccccccccchhhH-hhcC
Confidence 9986 69999999999999865311 122 4589999999999983 21111 000100 0124
Q ss_pred CCceEEEcCcCCC---cceEEEeCCCEEEEEEEEcCCCCeEeE-EEeCceeEEEEecCccCCCC--ccCeEEEcCCceEE
Q 011178 140 FPDGLVINGRGSN---ANTFTVDQGKTYRFRISNVGISTSINF-RIQGHKMLLVEVEGTHTLQN--TYDSLDIHLGQSYS 213 (491)
Q Consensus 140 ~~~~~~vNG~~~~---~~~~~v~~g~~~rlR~iN~~~~~~~~~-~i~~~~~~via~DG~~~~p~--~~~~l~l~pGeR~d 213 (491)
.++.++|||+... .+.+++++|++|||+++|++ +.+.+ ++++|.|+|++ ||.++.+. .++++.|+||||+|
T Consensus 214 ~~~~~~iNG~~~~~~~~~~l~v~~G~r~Rl~n~~~~--~~~~~~~i~gh~~~Vi~-dG~~~~~p~~~~dtv~l~pGer~~ 290 (340)
T 2bw4_A 214 TPTHIVFNGAVGALTGDHALTAAVGERVLVVHSQAN--RDTRPHLIGGHGDYVWA-TGKFRNPPDLDQETWLIPGGTAGA 290 (340)
T ss_dssp CCSEEEETTSTTTTSGGGCEEEETTCEEEEEEEESS--SCBCEEEETCCEEEEET-TCCTTSCCEEEESCCCBCTTEEEE
T ss_pred CCCEEEECCccCCccCCCceEcCCCCEEEEEECCCC--CccceEEecCcceEEeC-CCcccCCccccceEEEeCCCceEE
Confidence 6789999999842 28899999998776655544 44444 47899999997 99988553 47999999999999
Q ss_pred EEEEeCCCCcceEEEEEeeccCCCcceEEEEEecCCC
Q 011178 214 VLVRADQPPQGYYIVISTRFTSQVLSATSVLHYSNSA 250 (491)
Q Consensus 214 v~v~~~~~~g~~~i~~~~~~~~~~~~~~ail~y~~~~ 250 (491)
|+|++++ +|+|++.++...........++++|.+..
T Consensus 291 v~v~~~~-pG~y~~~~h~~~~h~~~Gm~~~~~V~~~~ 326 (340)
T 2bw4_A 291 AFYTFRQ-PGVYAYVNHNLIEAFELGAAGHFKVTGEW 326 (340)
T ss_dssp EEEECCS-CEEEEEEESSHHHHHTTSCEEEEEEESCC
T ss_pred EEEECCC-CeeeEEEcCchHHHHhCCCEEEEEECCCC
Confidence 9999995 79999998765311123457889998654
No 36
>2r7e_B Coagulation factor VIII; ceruloplasmin fold, cupper protein fold, C2 domain fold, ACU blood coagulation, disease mutation, glycoprotein; HET: NAG BMA MAN; 3.70A {Homo sapiens} PDB: 3cdz_B*
Probab=100.00 E-value=1.7e-37 Score=339.05 Aligned_cols=218 Identities=12% Similarity=0.113 Sum_probs=170.6
Q ss_pred cccCCCCeEEE--eeeEEEEEEecCCCCCeeeecccCCCCCCCCCCCCCCCCCCCCCCeEEEEEEeCC---------Ccc
Q 011178 6 HFSSLGCSLIT--HLYTHLVVLNFIYMAPLITLNGVQQRRNSWQDGVYGTNCPIPPGKNFTYVLQVKD---------QIG 74 (491)
Q Consensus 6 ~~~~~G~~l~v--~d~v~i~~~N~l~~~~siH~HG~~~~~~~~~DG~~~~q~~i~PG~~~~Y~f~~~~---------~~G 74 (491)
|+..+||+||+ ||+|+|+|+|+|+++++|||||++++.... ||++++||+|+||++|+|+|++++ ++|
T Consensus 193 ~l~~pGP~Ir~~~GD~v~v~~~N~l~~~~siH~HG~~~~~~~~-dG~~~~~~~I~PG~~~tY~f~~~~~~gp~~~d~~~G 271 (770)
T 2r7e_B 193 HLGLLGPYIRAEVEDNIMVTFRNQASRPYSFYSSLISYEEDQR-QGAEPRKNFVKPNETKTYFWKVQHHMAPTKDEFDCK 271 (770)
T ss_dssp TCCSCCCCCCCCSSSCEEEEEECCSSSCCCCCBTTCCCCCCSS-SCTTTTSSCCCSSCEEEEECCCCSSSSCCSSCCSEE
T ss_pred ccCCCCCeEEEEcCCEEEEEEEECCCCCcceeecccccccccC-CCCcCccCccCCCCeEEEEEEecCccCCccCCCCCe
Confidence 44556676664 466788899999999999999999987743 699889999999999999999974 899
Q ss_pred ceeEeCCccc--cccCCceeEEEEecCCCCCC--CCCCCCCcceEEeee------cccCCHHHHHHHHh-cCC----C--
Q 011178 75 SYFYFPSLAF--HKAAGGYGGIKIASRPLIPV--PFDPPAGDFTILAGD------WYKKNHTDLKAILD-SGS----D-- 137 (491)
Q Consensus 75 t~wYH~H~~~--q~~~Gl~G~liV~~~~~~~~--~~~~~~~e~~l~l~d------~~~~~~~~~~~~~~-~~~----~-- 137 (491)
|||||||.+. |+++||+|+|||++++.... .....++|++|++++ |+++... ..+.. ... .
T Consensus 272 t~wYHsh~~~~~q~~~GL~G~liV~~~~~~~~~~~~~~~d~E~vl~~~~~de~~swy~~~~~--~~~~~~p~~~~~~d~~ 349 (770)
T 2r7e_B 272 AWAYSSDVDLEKDVHSGLIGPLLVCHTNTLNPAHGRQVTVQEFALFFTIFDETKSWYFTENM--ERNCRAPCNIQMEDPT 349 (770)
T ss_dssp EEEECCCSSSSHHHHTSCCEEEEEECSTTSCSSSCCCCSSEEEECCCCEECCSSSSCTTGGG--SSCSCCSSCCCSSSSS
T ss_pred eEEeeccCCcHHHHhCCceeeEEECCCcccccccCCCccceEEEEEEeecCccccchhccch--hhcccCccccccCCcc
Confidence 9999999985 89999999999999754211 112457899988754 5444221 00000 000 0
Q ss_pred -CCCCceEEEcCcCC-CcceEEEeCCCEEEEEEEEcCCC-CeEeEEEeCceeEEEEecCccCCCCccCeEEEcCCceEEE
Q 011178 138 -LPFPDGLVINGRGS-NANTFTVDQGKTYRFRISNVGIS-TSINFRIQGHKMLLVEVEGTHTLQNTYDSLDIHLGQSYSV 214 (491)
Q Consensus 138 -~~~~~~~~vNG~~~-~~~~~~v~~g~~~rlR~iN~~~~-~~~~~~i~~~~~~via~DG~~~~p~~~~~l~l~pGeR~dv 214 (491)
....+.++|||+.+ ..+.+++++|++|||||+|++.. ..+.|||+||.|+|++.||. ..+++.|.||||++|
T Consensus 350 ~~~~~~~~~ING~~~~~~~~l~v~~Ge~vr~rliN~g~~~~~H~fHlhGh~f~Vv~~dg~-----~~Dtv~l~Pg~~~~v 424 (770)
T 2r7e_B 350 FKENYRFHAINGYIMDTLPGLVMAQDQRIRWYLLSMGSNENIHSIHFSGHVFTVRKKEEY-----KMALYNLYPGVFETV 424 (770)
T ss_dssp STTTSCEECTTSCTTTTCCCCCCCSSSCEEEECCCCCSSSCCCEEEBSSCCEECCSSSCC-----EESEEECCTTCCCEE
T ss_pred ccccCCccccCCccCCCCCCeEEeCCCEEEEEEEeCCCCcceEEEEEcCCEEEEEecCCc-----eeeEEEECCCeEEEE
Confidence 11235689999985 34789999999999999999865 47999999999999999974 679999999999999
Q ss_pred EEEeCCCCcceEEEEEee
Q 011178 215 LVRADQPPQGYYIVISTR 232 (491)
Q Consensus 215 ~v~~~~~~g~~~i~~~~~ 232 (491)
+|+++ .+|.|.+.++..
T Consensus 425 ~~~ad-~pG~w~~hcH~~ 441 (770)
T 2r7e_B 425 EMLPS-KAGIWRVECLIG 441 (770)
T ss_dssp EECCS-SCBCCCBCCCSH
T ss_pred EEEeC-CCCceEEEeccc
Confidence 99999 579988877653
No 37
>2dv6_A Nitrite reductase; electron transfer, reduction, denitrification, oxidoreductase; 2.20A {Hyphomicrobium denitrificans}
Probab=100.00 E-value=3.8e-34 Score=298.09 Aligned_cols=229 Identities=17% Similarity=0.205 Sum_probs=185.5
Q ss_pred CCCcccCCCCeEEE--eeeEEEEEEecCC--CCCeeeecccCCCCCCCCCCCCC-CCCCCCCCCeEEEEEEeCCCcccee
Q 011178 3 WMNHFSSLGCSLIT--HLYTHLVVLNFIY--MAPLITLNGVQQRRNSWQDGVYG-TNCPIPPGKNFTYVLQVKDQIGSYF 77 (491)
Q Consensus 3 ~~~~~~~~G~~l~v--~d~v~i~~~N~l~--~~~siH~HG~~~~~~~~~DG~~~-~q~~i~PG~~~~Y~f~~~~~~Gt~w 77 (491)
|..++..+||+|++ ||+++|+|+|.++ ..++|||||+.+ +||++. ++ |.||++++|.|++. ++||||
T Consensus 186 ~~~NG~~pgp~i~v~~G~~v~~rl~N~~~~~~~~~ih~Hg~~~-----~DG~~~~~~--i~pG~~~~~~~~~~-~~G~~~ 257 (447)
T 2dv6_A 186 WTFNGKVPGPFLRVRVGDTVELHLKNHKDSLMVHSVDFHGATG-----PGGAAAFTQ--TDPGEETVVTFKAL-IPGIYV 257 (447)
T ss_dssp EEETTBBSCCCEEEETTCEEEEEEEECTTCSSCBCCEETTCCS-----GGGGGGGCC--BCTTCEEEEEEECC-SCEEEE
T ss_pred EEECCccCCCeEEecCCCEEEEEEEeCCCCceeEEEeeccccC-----CCCCCccEE--eCCCCEEEEEEECC-CCeEEE
Confidence 34456678999987 5899999999986 578999999852 799876 54 99999999999994 899999
Q ss_pred EeCCcc---ccccCCceeEEEEecCCCCCCCCCCCCCcceEEeeecccCCHH--------HHHHHHhcCCCCCCCceEEE
Q 011178 78 YFPSLA---FHKAAGGYGGIKIASRPLIPVPFDPPAGDFTILAGDWYKKNHT--------DLKAILDSGSDLPFPDGLVI 146 (491)
Q Consensus 78 YH~H~~---~q~~~Gl~G~liV~~~~~~~~~~~~~~~e~~l~l~d~~~~~~~--------~~~~~~~~~~~~~~~~~~~v 146 (491)
||||.. .|+.+||+|+|+|++++.. +.+|+|++++++||++.... ...... ...++.++|
T Consensus 258 yh~h~~~~~~~~~~Gl~g~l~v~~~~~~----P~~d~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~-----~~~~~~~~i 328 (447)
T 2dv6_A 258 YHCATPSVPTHITNGMYGLLLVEPEGGL----PQVDREFYVMQGEIYTVKSFGTSGEQEMDYEKLI-----NEKPEYFLF 328 (447)
T ss_dssp EECCSSSHHHHHHTTCEEEEEEECTTCS----CCCSEEEEEEEEEECBSSCTTCCEECCBBHHHHH-----TTCCSEEEE
T ss_pred EEeCCCChHHHHhCCCEEEEEEeCCCCC----CCCCeeEEEEecccccCCcccccccccCChHHhh-----ccCCCEEEE
Confidence 999974 7889999999999986432 24588999999999875321 011111 124688999
Q ss_pred cCcCCCc---ceEEEeCCCEEEEEEEEcCCCCeEeEEEeCceeEEEEecCccCCCC--ccCeEEEcCCceEEEEEEeCCC
Q 011178 147 NGRGSNA---NTFTVDQGKTYRFRISNVGISTSINFRIQGHKMLLVEVEGTHTLQN--TYDSLDIHLGQSYSVLVRADQP 221 (491)
Q Consensus 147 NG~~~~~---~~~~v~~g~~~rlR~iN~~~~~~~~~~i~~~~~~via~DG~~~~p~--~~~~l~l~pGeR~dv~v~~~~~ 221 (491)
||+.... +.+++++|++|||||+|++....+.|+|+||.|+||+.||.++++. ..+++.|.||||++|+|+++ .
T Consensus 329 NG~~~~~~~~~~~~v~~g~~vrlrliN~~~~~~h~~hlhGh~f~vv~~dG~~~~~p~~~~dtv~l~pg~r~~i~~~~~-~ 407 (447)
T 2dv6_A 329 NGSVGSLTRSHPLYASVGETVRIFFGVGGPNFTSSFHVIGEIFDHVYSLGSVVSPPLIGVQTVSVPPGGATIVDFKID-R 407 (447)
T ss_dssp TTSTTCCCCCCCEEECTTCEEEEEEEEEESSCCEEEEEETCCEEEECGGGCSSSCCEEEESEEEECTTEEEEEEEECC-S
T ss_pred CCcccCCCCCcceEECCCCEEEEEEEeCCCCceEeEEEcCcEEEEEEcCCcccCCCcccccEEEECCCcEEEEEEECC-C
Confidence 9998421 4799999999999999999888999999999999999999998665 47999999999999999999 5
Q ss_pred CcceEEEEEeeccCCCcceEEEEEecCCC
Q 011178 222 PQGYYIVISTRFTSQVLSATSVLHYSNSA 250 (491)
Q Consensus 222 ~g~~~i~~~~~~~~~~~~~~ail~y~~~~ 250 (491)
+|.|++.++..... .....++++|.+..
T Consensus 408 pG~~~~hch~~~h~-~~Gm~~~~~v~~~~ 435 (447)
T 2dv6_A 408 AGRYILVDHALSRL-EHGLVGFLNVDGPK 435 (447)
T ss_dssp CEEEEEEESSGGGG-GGTCCEEEEECSCS
T ss_pred CEEEEEEecCcCcc-ccCCEEEEEEeCCC
Confidence 89999998865432 23457899997654
No 38
>2r7e_A Coagulation factor VIII; ceruloplasmin fold, cupper protein fold, C2 domain fold, ACU blood coagulation, disease mutation, glycoprotein; HET: NAG BMA MAN; 3.70A {Homo sapiens} PDB: 3cdz_A*
Probab=100.00 E-value=1.1e-35 Score=324.31 Aligned_cols=214 Identities=17% Similarity=0.141 Sum_probs=160.5
Q ss_pred cccCCCCeEEE--eeeEEEEEEecCCCCCeeeecccCCCCCCCCCC-----CCC-CCCCCCCCCeEEEEEEeCCCcc---
Q 011178 6 HFSSLGCSLIT--HLYTHLVVLNFIYMAPLITLNGVQQRRNSWQDG-----VYG-TNCPIPPGKNFTYVLQVKDQIG--- 74 (491)
Q Consensus 6 ~~~~~G~~l~v--~d~v~i~~~N~l~~~~siH~HG~~~~~~~~~DG-----~~~-~q~~i~PG~~~~Y~f~~~~~~G--- 74 (491)
|...+||+||+ ||+|+|+|+|+|++++||||||+++ .++|+|| ++. +||+|+||++|+|+|++++++|
T Consensus 446 ~~g~pGP~Ir~~~GD~v~v~~~N~l~~~~siHwHGl~~-~~~~~DG~~~~G~~~~~~~~I~PG~t~tY~f~~~~~agPg~ 524 (742)
T 2r7e_A 446 ESGILGPLLYGEVGDTLLIIFKNQASRPYNIYPHGITD-VRPLYSRRLPKGVKHLKDFPILPGEIFKYKWTVTVEDGPTK 524 (742)
T ss_dssp SSCSCCCCCCCBTTCEEECCEECCSSSCBCCEETTCSE-ECCTTCSCCSSSCSSTTTSCCBSSCEECCEEECCSTTSCCS
T ss_pred ccCCCCCeEEEECCCEEEEEEEeCCCCCcCEEeccccc-CCcccccccCCCCcccccccCCCCCeEEEEEEeccccCCcc
Confidence 33444555543 3455666999999999999999998 3567765 555 7999999999999999976554
Q ss_pred ------ceeEeCCcc--ccccCCceeEEEEecCCCC-C--CCCCCCCCcceEEeeec------ccCCHHHHHHHHh-cC-
Q 011178 75 ------SYFYFPSLA--FHKAAGGYGGIKIASRPLI-P--VPFDPPAGDFTILAGDW------YKKNHTDLKAILD-SG- 135 (491)
Q Consensus 75 ------t~wYH~H~~--~q~~~Gl~G~liV~~~~~~-~--~~~~~~~~e~~l~l~d~------~~~~~~~~~~~~~-~~- 135 (491)
|||||||.+ .|+++||+|+|||+++... + .+. ..|+|++|++++| +++. .+..+.. ..
T Consensus 525 ~d~~~gT~wYHsH~~~~~q~~~GL~G~lIV~~~~~~~~~~~~~-~~d~E~~l~~~~fde~~~wy~~~--~~~~~~~~p~~ 601 (742)
T 2r7e_A 525 SDPRCLTRYYSSFVNMERDLASGLIGPLLICYKESVDQRGNQI-MSDKRNVILFSVFDENRSWYLTE--NIQRFLPNPAG 601 (742)
T ss_dssp SSCSCCCCEEECCSSSSSTGGGSCCEECCCBCCCSCCCCCCSS-CCSCCCEEEECBCCGGGSSCSHH--HHHHHSSSSSC
T ss_pred cCCCceEEEEecCcchhhhhhccceeeEEEcCccccccccCcC-CCCceEEEEeecccccccccccc--chhhcccCchh
Confidence 999999987 5789999999999987531 1 112 4589999999754 4321 1211110 00
Q ss_pred CCCC------CCceEEEcCcCCCcceEEEeCCCEEEEEEEEcCCC-CeEeEEEeCceeEEEEecCccCCCCccCeEEEcC
Q 011178 136 SDLP------FPDGLVINGRGSNANTFTVDQGKTYRFRISNVGIS-TSINFRIQGHKMLLVEVEGTHTLQNTYDSLDIHL 208 (491)
Q Consensus 136 ~~~~------~~~~~~vNG~~~~~~~~~v~~g~~~rlR~iN~~~~-~~~~~~i~~~~~~via~DG~~~~p~~~~~l~l~p 208 (491)
.... ....++|||+.+....+.+++|++|||||+|+|.. ..+.|+|+||.|+|+ +...+++.|.|
T Consensus 602 v~~~~~~~~~~~~~~~ING~~~~~~~l~v~~Ge~vr~rliN~g~~~~~h~~HlhGh~f~v~--------~~~~Dtv~l~P 673 (742)
T 2r7e_A 602 VQLEDPEFQASNIMHSINGYVFDSLQLSVCLHEVAYWYILSIGAQTDFLSVFFSGYTFKHK--------MVYEDTLTLFP 673 (742)
T ss_dssp SCCCCHHHHGGGCCBCTTTTCSSCCCCCCCSSCCCEEEEEECSSCCCCCCCEESSSCCCCB--------SSSBCSSCCCC
T ss_pred cccccccccccCceeeecCcCCCCCcEEEeCCCEEEEEEEeCCCCcceEEEEEcCcEEEEe--------ccceeEEEECC
Confidence 0000 01247899997533359999999999999998764 468999999999986 56789999999
Q ss_pred CceEEEEEEeCCCCcceEEEEEee
Q 011178 209 GQSYSVLVRADQPPQGYYIVISTR 232 (491)
Q Consensus 209 GeR~dv~v~~~~~~g~~~i~~~~~ 232 (491)
|||++|+|+++ .+|.|.+.++..
T Consensus 674 g~~~~v~~~ad-~pG~w~~hcH~~ 696 (742)
T 2r7e_A 674 FSGETVFMSME-NPGLWILGCHNS 696 (742)
T ss_dssp CSSEECCEECC-CCCCSCCEECCC
T ss_pred CcEEEEEEEcC-CCeEEEEEeCCc
Confidence 99999999998 579999988864
No 39
>3gdc_A Multicopper oxidase; beta sandwich, plasmid, oxidoreductase; 1.80A {Arthrobacter SP}
Probab=99.96 E-value=1.5e-29 Score=247.65 Aligned_cols=228 Identities=16% Similarity=0.159 Sum_probs=165.0
Q ss_pred CceEEEcCcCCCcceEEEeCCCEEEEEEEEcCCCCeEeEEEeCceeEEEEecCccCCCCccCeEEEcCCceEEEEEEeCC
Q 011178 141 PDGLVINGRGSNANTFTVDQGKTYRFRISNVGISTSINFRIQGHKMLLVEVEGTHTLQNTYDSLDIHLGQSYSVLVRADQ 220 (491)
Q Consensus 141 ~~~~~vNG~~~~~~~~~v~~g~~~rlR~iN~~~~~~~~~~i~~~~~~via~DG~~~~p~~~~~l~l~pGeR~dv~v~~~~ 220 (491)
...+++||+.. .|+|+++.|+++++|+.|.... .+.++++|.. ..+.||.+. .+...|.||++++..++++
T Consensus 54 ~~~~~~ng~~p-gP~i~~~~Gd~v~v~~~N~~~~-~~~iH~HG~~--~~~~DG~p~----~~~~~i~PG~~~~y~f~~~- 124 (288)
T 3gdc_A 54 FKGWSYNGRIP-GPTLWAREGDALRIHFTNAGAH-PHTIHFHGVH--RATMDGTPG----IGAGSIAPGQSFTYEFDAT- 124 (288)
T ss_dssp EEEEEETTBSS-CCEEEEETTCEEEEEEEECSSS-CBCCEESSCC--CGGGSCCTT----STTCSBCTTCEEEEEEECC-
T ss_pred EEEEEECCccC-CCcEEEeCCCEEEEEEEeCCCC-cccEEecccc--ccccCCCCC----ccceeECCCCEEEEEEEcC-
Confidence 35799999864 6999999999999999999865 7889999975 457898754 2446789999999999997
Q ss_pred CCcceEEEEEeecc-CC-CcceEEEEEecCCCCCCCCCCCCCCCccccchhhhhhhhccCCCCCCCCCCCCCCCCccccc
Q 011178 221 PPQGYYIVISTRFT-SQ-VLSATSVLHYSNSAGSVSGPPPGGPTTQIDWSLEQARSLRRNLTASGPRPNPQGSYHYGLIN 298 (491)
Q Consensus 221 ~~g~~~i~~~~~~~-~~-~~~~~ail~y~~~~~~~~~~~p~~p~~~~~~~~~~~~~~~~~l~~~~~~~~p~~~~~~~~~~ 298 (491)
.+|+||...+.... .+ .....+.|.+..... . |..+
T Consensus 125 ~~Gt~~yH~H~~~~~~~~~~Gl~G~liV~~~~~-----~---~~~d---------------------------------- 162 (288)
T 3gdc_A 125 PFGTHLYHCHQSPLAPHIAKGLYGGFIVEPKEG-----R---PPAD---------------------------------- 162 (288)
T ss_dssp SCEEEEEECCCSSHHHHHHTTCEEEEEEECSSC-----C---CCCS----------------------------------
T ss_pred CCccEEEEecCcchHHHHhCcCeEEEEEeCCcc-----C---CCCc----------------------------------
Confidence 68999998775310 01 112334444432210 0 1001
Q ss_pred cceEEEEeccc-c--CcCCeEeEEEcCeeeeCCCCccccccccCCCCccccCCCCCCCCCCCcceeeeEEeecCCcEEEE
Q 011178 299 TTHTIRLQNTA-P--TINGKQRYAVNSVSFIPADTPLKLADYFKIPGVFSVGSIPDNPTGGGAYLQTSVMAADFRGFAEV 375 (491)
Q Consensus 299 ~~~~~~l~~~~-~--~~~~~~~~~iNg~~f~~~~~p~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~g~~v~~ 375 (491)
+++.+.... . .......|.|||+.|... ...++++.|++|+|
T Consensus 163 --~e~~l~~~d~~~~~g~~~~~~~iNG~~~~~~---------------------------------~~~l~v~~Ge~vr~ 207 (288)
T 3gdc_A 163 --DEMVMVMNGYNTDGGDDNEFYSVNGLPFHFM---------------------------------DFPVKVKQHELVRI 207 (288)
T ss_dssp --EEEEEEEEEECCSSTTCCSEEEETTSTTHHH---------------------------------HSCEEEETTCCEEE
T ss_pred --ceEEEEEeeEecCCCCCcceEEECccccccc---------------------------------CcccccCCCCEEEE
Confidence 111110000 0 001134689999876310 01256788999999
Q ss_pred EEEcCCCC--CCceeccCCCeEEEeeccCCCCCCCCCCcccCCCCceeeEEeCCCCEEEEEEEccCcceeeeeecchhhh
Q 011178 376 VFENPEDT--LQSWHIDGHNFFAVGMDGGEWTPASRLTYNLRDTISRCTVQVYPKSWTAVYVPLDNVGMWNIRSENWARQ 453 (491)
Q Consensus 376 ~i~N~~~~--~HP~HlHG~~F~Vl~~g~g~~~~~~~~~~~~~~p~~rDTv~v~p~~~~~irf~adnpG~w~~HCHil~H~ 453 (491)
.|.|.+.. .|||||||+.|+|++.+.. +..+.++||+.|+|++.+.|+|++++||.|+||||+++|+
T Consensus 208 ~l~N~g~~~~~H~fHlhG~~f~v~~~g~~-----------~~~~~~~Dtv~v~pg~~~~v~~~~~~pG~~~~hCH~~~H~ 276 (288)
T 3gdc_A 208 HLINVLEYDPINSFHIHGNFFHYYPTGTM-----------LTPSEYTDTISQVQGQRGILELRFPYPGKFMFHAHKTEFA 276 (288)
T ss_dssp EEEECCCSSSEEEEEETTCCEEEEETTCC-----------SSCSEEESEEEEETTCEEEEEECCCSCEEEEEECSSHHHH
T ss_pred EEEeCCCCCcceeEEEcCCEEEEEcCCCc-----------cCCCceeeEEEeCCCceEEEEEECCCCEEEEEEecChHHH
Confidence 99999853 5999999999999875421 2335799999999999999999999999999999999999
Q ss_pred hcceEEEEEEec
Q 011178 454 YLGQQFYLRVYS 465 (491)
Q Consensus 454 d~GMm~~~~V~~ 465 (491)
+.|||..|+|.+
T Consensus 277 ~~GM~~~~~V~~ 288 (288)
T 3gdc_A 277 ELGWMGFFEVSA 288 (288)
T ss_dssp TTTCEEEEEEEC
T ss_pred hcCCCEEEEEeC
Confidence 999999999863
No 40
>2zwn_A Two-domain type laccase; muticopper oxidase, oxidoreductase; 1.70A {Metagenomes}
Probab=99.96 E-value=9.5e-29 Score=247.49 Aligned_cols=245 Identities=16% Similarity=0.138 Sum_probs=165.1
Q ss_pred CceEEEcCcCCCcceEEEeCCCEEEEEEEEcCCCCeEeEEEeCceeEEEEe---cCccCCCCccCeEEEcCCceEEEEEE
Q 011178 141 PDGLVINGRGSNANTFTVDQGKTYRFRISNVGISTSINFRIQGHKMLLVEV---EGTHTLQNTYDSLDIHLGQSYSVLVR 217 (491)
Q Consensus 141 ~~~~~vNG~~~~~~~~~v~~g~~~rlR~iN~~~~~~~~~~i~~~~~~via~---DG~~~~p~~~~~l~l~pGeR~dv~v~ 217 (491)
...+++||+.. .|+|++++|+++|+|++|.+.. .. +|+.|-+.+.+. ||.+. ++...|.||||+++.++
T Consensus 23 ~~~~~~NG~~p-GP~I~v~~Gd~v~v~v~N~l~~-~~--siH~HG~~~~~~~~~DGvp~----vtq~~I~PG~~~~y~f~ 94 (339)
T 2zwn_A 23 YKVFGFNGQVP-GPLIHVQEGDDVIVNVTNNTSL-PH--TIHWHGVHQKGTWRSDGVPG----VTQQPIEAGDSYTYKFK 94 (339)
T ss_dssp EEEEEETTBSS-CCEEEEETTCEEEEEEEEESSS-CB--CCEEETCCCTTCGGGSCCBT----TTBCCBCTTCEEEEEEE
T ss_pred EEEEEECCccC-CCeEEEECCCEEEEEEEECCCC-Cc--cEEeCCCCcCCCcccCCCCc----cccCccCCCCeEEEEEE
Confidence 35799999953 7999999999999999999864 34 455555666664 99853 35567999999999999
Q ss_pred eCCCCcceEEEEEeeccCC-C-cceEEEEEecCCCCCCCCCCCCCCCccccchhhhhhhhccCCCCCCCCCCCCCCCCcc
Q 011178 218 ADQPPQGYYIVISTRFTSQ-V-LSATSVLHYSNSAGSVSGPPPGGPTTQIDWSLEQARSLRRNLTASGPRPNPQGSYHYG 295 (491)
Q Consensus 218 ~~~~~g~~~i~~~~~~~~~-~-~~~~ail~y~~~~~~~~~~~p~~p~~~~~~~~~~~~~~~~~l~~~~~~~~p~~~~~~~ 295 (491)
++ .+|+||+.++.....+ . ....+.+....... ..++.....+....+. ++..... ..+...+
T Consensus 95 ~~-~~Gt~wyH~H~~~~~q~~~~Gl~G~liV~p~~~---~~~~~~~d~e~~l~l~-----d~~~~~~-~~~~~~g----- 159 (339)
T 2zwn_A 95 AD-RIGTLWYHCHVNVNEHVGVRGMWGPLIVDPKQP---LPIEKRVTKDVIMMMS-----TWESAVA-DKYGEGG----- 159 (339)
T ss_dssp CC-SCEEEEEECCSSHHHHTTTSCCEEEEEEECSSC---CTTGGGCSEEEEEEEE-----EECGGGT-TCTTCCC-----
T ss_pred CC-CCEEEEEEecCCchhhhhcCCceEeEEecCCCc---ccccccCCceEEEEee-----heecccc-cccCCCC-----
Confidence 98 5899999876532111 1 12233333332211 1111000011100000 0111000 0000000
Q ss_pred ccccceEEEEeccccCcCCeEeEEEcCeeeeCCCCccccccccCCCCccccCCCCCCCCCCCcceeeeEEeecCCcEEEE
Q 011178 296 LINTTHTIRLQNTAPTINGKQRYAVNSVSFIPADTPLKLADYFKIPGVFSVGSIPDNPTGGGAYLQTSVMAADFRGFAEV 375 (491)
Q Consensus 296 ~~~~~~~~~l~~~~~~~~~~~~~~iNg~~f~~~~~p~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~g~~v~~ 375 (491)
. .......|.|||+.|.. ...+.++.|++++|
T Consensus 160 -----------~---~~~~~~~~~ING~~~~~----------------------------------~~~~~v~~G~~vrl 191 (339)
T 2zwn_A 160 -----------T---PMNVADYFSVNAKSFPL----------------------------------TQPLRVKKGDVVKI 191 (339)
T ss_dssp -----------S---TTSCCCEEEETTBCTTS----------------------------------SCCEEECTTCEEEE
T ss_pred -----------C---CccccceEEEccccCCC----------------------------------cccEEECCCCEEEE
Confidence 0 00112468899976521 12257788999999
Q ss_pred EEEcCCCCCCceeccCCCeEEEeeccCCCCCCCCCCcccCCCCceeeEEeCCCCEEEEEEEccCcceeeeeecchhh---
Q 011178 376 VFENPEDTLQSWHIDGHNFFAVGMDGGEWTPASRLTYNLRDTISRCTVQVYPKSWTAVYVPLDNVGMWNIRSENWAR--- 452 (491)
Q Consensus 376 ~i~N~~~~~HP~HlHG~~F~Vl~~g~g~~~~~~~~~~~~~~p~~rDTv~v~p~~~~~irf~adnpG~w~~HCHil~H--- 452 (491)
+|.|.+...||||||||.|+|++.++. .+.+|.++||+.|+||+.+.|+|++|+||.|+||||++.|
T Consensus 192 rliN~~~~~h~~hlhGh~f~vi~~DG~----------~~~~p~~~dtv~l~pg~r~~v~~~~~~pG~w~~hch~~~H~~~ 261 (339)
T 2zwn_A 192 RFFGAGGGIHAMHSHGHDMLVTHKDGL----------PLDSPYYADTVLVSPGERYDVIIEADNPGRFIFHDHVDTHVTA 261 (339)
T ss_dssp EEEECSSSCEEEEETTCCEEEEEETTE----------EEEEEEEESEEEECTTCEEEEEEECCSCSEEEEEECCGGGSCB
T ss_pred EEEeCCCceEEEEECCcEEEEEEeCCe----------ecCCCcEEEEEEECCCCEEEEEEEeCCCeeEEEEEechhhccc
Confidence 999998888999999999999998532 2334779999999999999999999999999999999999
Q ss_pred ---hhcceEEEEEEecC
Q 011178 453 ---QYLGQQFYLRVYSS 466 (491)
Q Consensus 453 ---~d~GMm~~~~V~~~ 466 (491)
++.|||+.+++...
T Consensus 262 ~~~~~~gm~a~l~~~g~ 278 (339)
T 2zwn_A 262 GGKHPGGPITVIEYDGV 278 (339)
T ss_dssp TTBSSCSSEEEEEETTS
T ss_pred ccccCCCcEEEEEECCC
Confidence 88999999998643
No 41
>3g5w_A Multicopper oxidase type 1; two domain, laccase, nitrifier, metal B protein; 1.90A {Nitrosomonas europaea}
Probab=99.96 E-value=1.7e-28 Score=243.11 Aligned_cols=246 Identities=17% Similarity=0.152 Sum_probs=167.6
Q ss_pred ceEEEcCcCCCcceEEEeCCCEEEEEEEEcCCCCeEeEEEeCceeE-EEEecCccCCCCccCeEEEcCCceEEEEEEeCC
Q 011178 142 DGLVINGRGSNANTFTVDQGKTYRFRISNVGISTSINFRIQGHKML-LVEVEGTHTLQNTYDSLDIHLGQSYSVLVRADQ 220 (491)
Q Consensus 142 ~~~~vNG~~~~~~~~~v~~g~~~rlR~iN~~~~~~~~~~i~~~~~~-via~DG~~~~p~~~~~l~l~pGeR~dv~v~~~~ 220 (491)
..+++||+.. .|+|+++.|+++++|+.|.... ...++.+|.... ..+.||.+. +....|.||++++..++++
T Consensus 23 ~~~~~ng~~p-GP~i~~~~Gd~v~v~~~N~l~~-~~siH~HG~~~~~~~~~DG~p~----~t~~~i~PG~~~~y~f~~~- 95 (318)
T 3g5w_A 23 HTFAFNGQVP-APLIHVMEGDDVTVNVTNMTTL-PHTIHWHGMLQRGTWQSDGVPH----ATQHAIEPGDTFTYKFKAE- 95 (318)
T ss_dssp EEEEETTBSS-CCEEEEETTCEEEEEEEECSSS-CBCCEEETCCCTTCGGGSCCBT----TTBCCBCTTCEEEEEEECC-
T ss_pred EEEEECCccC-CceEEEeCCCEEEEEEEeCCCC-ceeEEecCcCCCCCcccCCCcc----cccccCCCCCEEEEEEEcC-
Confidence 4789999864 7999999999999999998854 688888887654 236788754 3456789999999999998
Q ss_pred CCcceEEEEEeeccCCC--cceEEEEEecCCCCCCCCCCCCCCCccccchhhhhhhhccCCCCCCCCCCCCCCCCccccc
Q 011178 221 PPQGYYIVISTRFTSQV--LSATSVLHYSNSAGSVSGPPPGGPTTQIDWSLEQARSLRRNLTASGPRPNPQGSYHYGLIN 298 (491)
Q Consensus 221 ~~g~~~i~~~~~~~~~~--~~~~ail~y~~~~~~~~~~~p~~p~~~~~~~~~~~~~~~~~l~~~~~~~~p~~~~~~~~~~ 298 (491)
.+|+||..++.....+. ....+.|.+..... .+++.....+....+. +|...... ..... ..
T Consensus 96 ~~Gt~wYH~H~~~~~~~~~~Gl~G~lIV~~~~~---~~~~~~~d~e~~l~l~-----dw~~~~~~-~~~~~------~~- 159 (318)
T 3g5w_A 96 PAGTMWYHCHVNVNEHVTMRGMWGPLIVEPKNP---LPIEKTVTKDYILMLS-----DWVSSWAN-KPGEG------GI- 159 (318)
T ss_dssp SCEEEEEECCSSHHHHHHHSCCEEEEEEECSSC---CHHHHTCCEEEEEEEE-----EECGGGTT-CTTCC------CC-
T ss_pred CCEEEEEEccCChhhhhccCCCEEEEEEcCCCc---ccccccccceeEEEEE-----eecccccc-ccccC------CC-
Confidence 57999987765321110 12334444433210 0000000001000000 01000000 00000 00
Q ss_pred cceEEEEeccccCcCCeEeEEEcCeeeeCCCCccccccccCCCCccccCCCCCCCCCCCcceeeeEEeecCCcEEEEEEE
Q 011178 299 TTHTIRLQNTAPTINGKQRYAVNSVSFIPADTPLKLADYFKIPGVFSVGSIPDNPTGGGAYLQTSVMAADFRGFAEVVFE 378 (491)
Q Consensus 299 ~~~~~~l~~~~~~~~~~~~~~iNg~~f~~~~~p~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~g~~v~~~i~ 378 (491)
.......|.|||+.|.. ...+.++.|++++|+|.
T Consensus 160 ------------~~~~~d~~~ING~~~~~----------------------------------~~~l~v~~G~~vrlrli 193 (318)
T 3g5w_A 160 ------------PGDVFDYYTINAKSFPE----------------------------------TQPIRVKKGDVIRLRLI 193 (318)
T ss_dssp ------------TTCCCCEEEETTBCBTS----------------------------------SCCEEECTTCEEEEEEE
T ss_pred ------------CCCcCcEEEEcCcCCCC----------------------------------CccEEeCCCCEEEEEEE
Confidence 00112358999987621 11257789999999999
Q ss_pred cCCCCCCceeccCCCeEEEeeccCCCCCCCCCCcccCCCCceeeEEeCCCCEEEEEEEccCcceeeeeecchhhhh----
Q 011178 379 NPEDTLQSWHIDGHNFFAVGMDGGEWTPASRLTYNLRDTISRCTVQVYPKSWTAVYVPLDNVGMWNIRSENWARQY---- 454 (491)
Q Consensus 379 N~~~~~HP~HlHG~~F~Vl~~g~g~~~~~~~~~~~~~~p~~rDTv~v~p~~~~~irf~adnpG~w~~HCHil~H~d---- 454 (491)
|.+...||||||||.|+|+++.++ .+.+|.++||+.|.|++.+.|+|+|+|||.|+||||+++|++
T Consensus 194 N~~~~~h~~hlhGh~f~vi~~dG~----------~~~~p~~~dtv~l~pger~~v~~~a~~pG~w~~hCH~~~H~~~g~~ 263 (318)
T 3g5w_A 194 GAGDHVHAIHTHGHISQIAFKDGF----------PLDKPIKGDTVLIGPGERYDVILNMDNPGLWMIHDHVDTHTTNGDK 263 (318)
T ss_dssp ECSSSCEEEEETTSCEEEEEETTE----------EEEEEEEESEEEECTTCEEEEEEECCSCSEEEEEESSGGGSCBTTB
T ss_pred eCCCceEEEEECCcEEEEEecCCc----------ccCCCccccEEEECCCCEEEEEEECCCCeeEEEEeccHHHhhccCc
Confidence 998888999999999999998532 233577999999999999999999999999999999999998
Q ss_pred --cceEEEEEEecC
Q 011178 455 --LGQQFYLRVYSS 466 (491)
Q Consensus 455 --~GMm~~~~V~~~ 466 (491)
.|||..++|...
T Consensus 264 ~~~Gm~~~i~~~g~ 277 (318)
T 3g5w_A 264 PDGGIMTTIEYEEV 277 (318)
T ss_dssp SSCBSEEEEEETTT
T ss_pred CCCCCEEEEEECCC
Confidence 589999998653
No 42
>1sdd_A Coagulation factor V; copper-binding protein, cofactor, blood clottin; HET: NAG NDG; 2.80A {Bos taurus} SCOP: b.6.1.3 b.6.1.3
Probab=99.90 E-value=4.8e-25 Score=217.48 Aligned_cols=232 Identities=13% Similarity=0.068 Sum_probs=137.7
Q ss_pred EEEcCcCCCcceEEEeCCCEEEEEEEEcCCCCeEeEEEeCceeEEEEecCccCCC----CccCeEEEcCCceEEEEEEeC
Q 011178 144 LVINGRGSNANTFTVDQGKTYRFRISNVGISTSINFRIQGHKMLLVEVEGTHTLQ----NTYDSLDIHLGQSYSVLVRAD 219 (491)
Q Consensus 144 ~~vNG~~~~~~~~~v~~g~~~rlR~iN~~~~~~~~~~i~~~~~~via~DG~~~~p----~~~~~l~l~pGeR~dv~v~~~ 219 (491)
.++||.. .|+|++++|+++|+|+.|... ..+.++.+|..+. .+.||.+... .......|.||||++..++++
T Consensus 52 ~~~n~~p--GP~I~v~~Gd~v~v~~~N~l~-~~~siH~HGl~~~-~~~dG~~~~dg~~~~~~~~~~I~PG~~~~Y~f~~~ 127 (306)
T 1sdd_A 52 SRTSGLL--GPTLYAEVGDIMKVHFKNKAH-KPLSIHAQGIKYS-KFSEGASYSDHTLPMEKMDDAVAPGQEYTYEWIIS 127 (306)
T ss_dssp CSSCCSC--CCCEEEETTCEEEEEEEECSS-SCBCCEEESSCCC-TTTSCCCSCCCCCHHHHTTTCBCTTCEEEEEEECC
T ss_pred cccCCcc--CCEEEEeCCCEEEEEEEECCC-CcccEeecceecc-cccCCCccCCCCcccccCCCccCCCCeEEEEEEeC
Confidence 4589877 899999999999999999874 5778888887642 2578876521 223357799999999999997
Q ss_pred CCC---------cceEEEEEeeccC---CCcceEEEEEecCCCCCCCCCCCCCCCccccchhhhhhhhccCCCCCCCCCC
Q 011178 220 QPP---------QGYYIVISTRFTS---QVLSATSVLHYSNSAGSVSGPPPGGPTTQIDWSLEQARSLRRNLTASGPRPN 287 (491)
Q Consensus 220 ~~~---------g~~~i~~~~~~~~---~~~~~~ail~y~~~~~~~~~~~p~~p~~~~~~~~~~~~~~~~~l~~~~~~~~ 287 (491)
+.. |+||...+..... ..+.+ ++|...... ....+.+ + ..+..+ ...+..
T Consensus 128 ~~~gp~~~d~~~GT~wYHsH~~~~~q~~~GL~G-~liV~~~~~-~~~~~~~--~--~~d~e~------~l~~~d------ 189 (306)
T 1sdd_A 128 EHSGPTHDDPPCLTHIYYSYVNLVEDFNSGLIG-PLLICKKGT-LTEDGTQ--K--MFEKQH------VLMFAV------ 189 (306)
T ss_dssp GGGSCCSSSCSEEEEEEECCSSSHHHHHTTCCE-EEEEECTTC-BCTTSSB--S--SSCCCC------CCBCCE------
T ss_pred CccCCCCCCCCceEEEEeccCCchhhhccCceE-EEEEccCCC-CCccCCc--C--cccceE------EEEEEe------
Confidence 643 6999988743211 11222 233332211 0000000 0 001000 000000
Q ss_pred CCCCCCccccccceEEEEeccccCcCCeEeEEEcCeeeeCCCCccccccccCCCCccccCCCCCCCCCCCcceeeeEEee
Q 011178 288 PQGSYHYGLINTTHTIRLQNTAPTINGKQRYAVNSVSFIPADTPLKLADYFKIPGVFSVGSIPDNPTGGGAYLQTSVMAA 367 (491)
Q Consensus 288 p~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~iNg~~f~~~~~p~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~ 367 (491)
+.-..+. .......|.|||+.|.. .| .+.+
T Consensus 190 ---------------~d~~~~~-~~~~~~~~~ING~~~~~--~p--------------------------------~l~v 219 (306)
T 1sdd_A 190 ---------------FDESKSW-NQTSSLMYTVNGYVNGT--MP--------------------------------DITV 219 (306)
T ss_dssp ---------------EETTSSS-SCCCCEEECSSSCCSSC--CC--------------------------------CCCC
T ss_pred ---------------ccccccc-ccCCCcceeeCCEecCC--Cc--------------------------------ceEE
Confidence 0000000 00113458888887621 11 1456
Q ss_pred cCCcEEEEEEEcCCCC--CCceeccCCCeEEEeeccCCCCCCCCCCcccCCCCceeeEEeCCCCEEEEEEEccCcceeee
Q 011178 368 DFRGFAEVVFENPEDT--LQSWHIDGHNFFAVGMDGGEWTPASRLTYNLRDTISRCTVQVYPKSWTAVYVPLDNVGMWNI 445 (491)
Q Consensus 368 ~~g~~v~~~i~N~~~~--~HP~HlHG~~F~Vl~~g~g~~~~~~~~~~~~~~p~~rDTv~v~p~~~~~irf~adnpG~w~~ 445 (491)
+.|++++|+|.|.+.. .||||||||.|++ +| .++||+.|.||+.+.|+|++++||.|+|
T Consensus 220 ~~G~~vrlrliN~g~~~~~h~~hlhG~~~~~----dG---------------~~~dtv~l~pger~~v~~~~~~pG~~~~ 280 (306)
T 1sdd_A 220 CAHDHISWHLIGMSSGPELFSIHFNGQVLEQ----NH---------------HKISAITLVSATSTTANMTVSPEGRWTI 280 (306)
T ss_dssp CCC------BBCCCSSSCEECCBCSSTTCEE----TT---------------EECSCCCEETTCCBC--------CCCCC
T ss_pred cCCCEEEEEEEeCCCCCccEEEEECCcEeee----CC---------------EEcceEEECCCcEEEEEEEcCCCeEEEE
Confidence 7899999999999864 6999999999986 22 2589999999999999999999999999
Q ss_pred eecchhhhhcceEEEEEEecC
Q 011178 446 RSENWARQYLGQQFYLRVYSS 466 (491)
Q Consensus 446 HCHil~H~d~GMm~~~~V~~~ 466 (491)
|||+++|++.|||+.|+|.+.
T Consensus 281 hch~~~H~~~GM~~~~~V~~~ 301 (306)
T 1sdd_A 281 ASLIPRHFQAGMQAYIDIKNC 301 (306)
T ss_dssp BCCSTTTGGGTCBCCC-----
T ss_pred EeCChHHHhcCCeEEEEEecC
Confidence 999999999999999998753
No 43
>1sdd_B Coagulation factor V; copper-binding protein, cofactor, blood clottin; HET: NAG NDG; 2.80A {Bos taurus} SCOP: b.6.1.3 b.6.1.3 b.18.1.2 b.18.1.2
Probab=99.87 E-value=9.2e-22 Score=213.39 Aligned_cols=242 Identities=12% Similarity=0.128 Sum_probs=145.9
Q ss_pred cceEEEeCCCEEEEEEEEcCCCCeEeEEEeCceeEEEEecCccCCC----CccCeEEEcCCceEEEEEEeCCC-----Cc
Q 011178 153 ANTFTVDQGKTYRFRISNVGISTSINFRIQGHKMLLVEVEGTHTLQ----NTYDSLDIHLGQSYSVLVRADQP-----PQ 223 (491)
Q Consensus 153 ~~~~~v~~g~~~rlR~iN~~~~~~~~~~i~~~~~~via~DG~~~~p----~~~~~l~l~pGeR~dv~v~~~~~-----~g 223 (491)
.|+|++++|+++++|+.|.... ...+|.||.... .+.||.+... ..+....|.|||+++..+++++. +|
T Consensus 68 GP~I~~~~Gd~v~v~~~N~l~~-~~siH~HGl~~~-~~~DG~~~~~~~~~~~~~~~~I~PG~~~tY~f~~~~~~gp~~~G 145 (647)
T 1sdd_B 68 GPVIRAEVDDVIQVRFKNLASR-PYSLHAHGLSYE-KSSEGKTYEDDSPEWFKEDNAIQPNKTYTYVWHATTRSGPENPG 145 (647)
T ss_dssp CCCEEEETTCEEEEEECCCSSS-CBCCEEETCC----------------------CCBCTTCCEECCEECCTTTSCCSSS
T ss_pred CceEEEeCCCEEEEEEEECCCC-ceEEecCcceeC-CCCCCccccCCCCcccccCcccCCCCeEEEEEECCcccCCCCCC
Confidence 6999999999999999999864 678888887654 5789976421 12335679999999999999874 47
Q ss_pred ----ceEEEEEeeccCCC-cceEEEEEecCCCCC-CCCCCCCCCCccccchhhhh-hhhccCCCCCCCCCCCCCCCCccc
Q 011178 224 ----GYYIVISTRFTSQV-LSATSVLHYSNSAGS-VSGPPPGGPTTQIDWSLEQA-RSLRRNLTASGPRPNPQGSYHYGL 296 (491)
Q Consensus 224 ----~~~i~~~~~~~~~~-~~~~ail~y~~~~~~-~~~~~p~~p~~~~~~~~~~~-~~~~~~l~~~~~~~~p~~~~~~~~ 296 (491)
+||...+.....+. ....+.|........ .....|. ...+....+... ....+.+.. ...
T Consensus 146 ~~c~T~wYHsH~~~~~q~~~GL~G~lIV~~~~~~~~~~~~~~-~~~e~~l~l~~~d~~~~w~~~~-----~~~------- 212 (647)
T 1sdd_B 146 SACRAWAYYSAVNPEKDIHSGLIGPLLICRKGTLDKETNMPV-DMREFVLLFMVFDEKKSWYYDK-----KPT------- 212 (647)
T ss_dssp CSEEEEEEECCSSHHHHHTTTCEEEEEEECTTSSCTTSCCCS-SCCEEEEEEEEEEGGGSSCCC----------------
T ss_pred CCceEEEEccCCCCcccccccCccCEEEeeCCCcccccCCCC-cceeEEEEEEeecCcccccccc-----Ccc-------
Confidence 99998776321111 112332222222111 1000111 001111111000 000111100 000
Q ss_pred cccceEEEEeccccCcCCeEeEEEcCeeeeCCCCccccccccCCCCccccCCCCCCCCCCCcceeeeEEeecCCcEEEEE
Q 011178 297 INTTHTIRLQNTAPTINGKQRYAVNSVSFIPADTPLKLADYFKIPGVFSVGSIPDNPTGGGAYLQTSVMAADFRGFAEVV 376 (491)
Q Consensus 297 ~~~~~~~~l~~~~~~~~~~~~~~iNg~~f~~~~~p~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~g~~v~~~ 376 (491)
..+.... .........+.|||+.|. .| .+.++.|++++|+
T Consensus 213 ----~~~~~~~-~~~~~~~~~~~iNG~~~~---~p--------------------------------~l~v~~G~~vrlr 252 (647)
T 1sdd_B 213 ----RSWRRAS-SEVKNSHEFHAINGMIYN---LP--------------------------------GLRMYEQEWVRLH 252 (647)
T ss_dssp ----------------CCCEEEEETTBSSC---CC--------------------------------CCEEETTCEEEEE
T ss_pred ----cccccCC-cchhhcCceeccCCEecC---CC--------------------------------CeEEcCCCEEEEE
Confidence 0000000 000012356888988761 11 1467889999999
Q ss_pred EEcCCC--CCCceeccCCCeEEEeeccCCCCCCCCCCcccCCCCceeeEEeCCCCEEEEEEEccCcceeeeeecchhhhh
Q 011178 377 FENPED--TLQSWHIDGHNFFAVGMDGGEWTPASRLTYNLRDTISRCTVQVYPKSWTAVYVPLDNVGMWNIRSENWARQY 454 (491)
Q Consensus 377 i~N~~~--~~HP~HlHG~~F~Vl~~g~g~~~~~~~~~~~~~~p~~rDTv~v~p~~~~~irf~adnpG~w~~HCHil~H~d 454 (491)
|.|.+. +.||||+|||.|+|++.+ +.++||+.|.|++.+.|+|++++||.|+||||+++|++
T Consensus 253 liN~~~~~~~h~~hlhG~~f~vi~~d----------------~~~~d~v~l~pg~r~~v~~~~~~pG~w~~hch~~~h~~ 316 (647)
T 1sdd_B 253 LLNLGGSRDIHVVHFHGQTLLENGTQ----------------QHQLGVWPLLPGSFKTLEMKASKPGWWLLDTEVGEIQR 316 (647)
T ss_dssp EEECCCTTCCEEEEETTCCEEECSSS----------------CEEESSEEECTTEEEEEEEECCSSEEEEEECCCHHHHT
T ss_pred EEeCCCCCcceeEEEcCcEEEEecCC----------------CcccceEEECCCeEEEEEEEeccceEeecccCcccccc
Confidence 999875 379999999999998652 34799999999999999999999999999999999999
Q ss_pred cceEEEEEEec
Q 011178 455 LGQQFYLRVYS 465 (491)
Q Consensus 455 ~GMm~~~~V~~ 465 (491)
.|||+.|.|.+
T Consensus 317 ~Gm~~~~~V~~ 327 (647)
T 1sdd_B 317 AGMQTPFLIVD 327 (647)
T ss_dssp TTCEEEEEEEC
T ss_pred cccccceeeec
Confidence 99999999964
No 44
>2bw4_A Copper-containing nitrite reductase; oxidoreductase, denitrification, catalysis, enzyme mechanism, nitrate assimilation; 0.90A {Achromobacter cycloclastes} SCOP: b.6.1.3 b.6.1.3 PDB: 1nib_A 1nia_A 1nid_A 1nie_A 1nic_A 1nif_A 2bw5_A 2bwd_A 2bwi_A 2nrd_A 2y1a_A 1kcb_A 1rzp_A* 1rzq_A 2avf_A 1as6_A 1aq8_A 1as7_A 1as8_A 2afn_A ...
Probab=99.86 E-value=4.6e-21 Score=192.11 Aligned_cols=258 Identities=12% Similarity=0.119 Sum_probs=155.9
Q ss_pred CceEEEcCcCCCcceEEEeCCCEEEEEEEEcCC-CCeEeEEEeCceeEEEEecCccCCCCccCeEEEcCCceEEEEEEeC
Q 011178 141 PDGLVINGRGSNANTFTVDQGKTYRFRISNVGI-STSINFRIQGHKMLLVEVEGTHTLQNTYDSLDIHLGQSYSVLVRAD 219 (491)
Q Consensus 141 ~~~~~vNG~~~~~~~~~v~~g~~~rlR~iN~~~-~~~~~~~i~~~~~~via~DG~~~~p~~~~~l~l~pGeR~dv~v~~~ 219 (491)
...+++||+.. .|+|++++|+++|+|++|... ...+.+++++... +.||..+ . .|.|||++++.++++
T Consensus 59 ~~~~~~ng~~p-gP~i~v~~Gd~v~v~~~N~~~~~~~hg~~~~~~~~---~~~~~~~-----~--~i~PG~~~~y~~~~~ 127 (340)
T 2bw4_A 59 IHAMTFNGSVP-GPLMVVHENDYVELRLINPDTNTLLHNIDFHAATG---ALGGGAL-----T--QVNPGEETTLRFKAT 127 (340)
T ss_dssp EEEEEETTBSS-CCEEEEETTCEEEEEEEECTTCCSCBCCEETTSCS---GGGGGGG-----C--CBCTTEEEEEEEECC
T ss_pred EEEEEECCCCC-CCcEEEcCCCEEEEEEEeCCCCCccCcceeCCcCC---CCCCccc-----e--EeCCCCEEEEEEECC
Confidence 35789999853 699999999999999999973 2456667766542 2233222 1 399999999999998
Q ss_pred CCCcceEEEEEeecc--CCC-cceEEEEEecCCCC-CCCCCCCCCCCccccchhhhhhhhccCCCCCCCCCCCCCCCC-c
Q 011178 220 QPPQGYYIVISTRFT--SQV-LSATSVLHYSNSAG-SVSGPPPGGPTTQIDWSLEQARSLRRNLTASGPRPNPQGSYH-Y 294 (491)
Q Consensus 220 ~~~g~~~i~~~~~~~--~~~-~~~~ail~y~~~~~-~~~~~~p~~p~~~~~~~~~~~~~~~~~l~~~~~~~~p~~~~~-~ 294 (491)
+ +|+||..++.... .+. ....+.+....... ....+.|.. .+.+..+. ..++.+.. .+.+.+. +
T Consensus 128 ~-~Gt~wyH~h~~~~~~~~~~~Gl~G~~iV~~~~~~~~~~~~p~~--~d~e~~l~---l~D~~~~~-----~~~g~~~~~ 196 (340)
T 2bw4_A 128 K-PGVFVYHCAPEGMVPWHVTSGMNGAIMVLPRDGLKDEKGQPLT--YDKIYYVG---EQDFYVPK-----DEAGNYKKY 196 (340)
T ss_dssp S-CEEEEEECCCTTCHHHHHHTTCEEEEEEECTBCEECTTSCEEC--CSEEEEEE---EEEECCCB-----CTTSCBCCC
T ss_pred C-CeEEEEEcCCCCchhhHHhCcCEEEEEEccCcCcccccCCCcC--cceeEEEe---eeeeeecc-----ccCCccccc
Confidence 5 8999998875310 111 12233333322211 000001100 11110000 00111100 0000000 0
Q ss_pred ccc--ccceEEEEeccccCcCCeEeEEEcCeeeeCCCCccccccccCCCCccccCCCCCCCCCCCcceeeeEEeecCCcE
Q 011178 295 GLI--NTTHTIRLQNTAPTINGKQRYAVNSVSFIPADTPLKLADYFKIPGVFSVGSIPDNPTGGGAYLQTSVMAADFRGF 372 (491)
Q Consensus 295 ~~~--~~~~~~~l~~~~~~~~~~~~~~iNg~~f~~~~~p~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~g~~ 372 (491)
... ..... +... .......|.|||+.|.... ...+.++.|++
T Consensus 197 ~~~~~~~~~~--~~~~--~~~~~~~~~iNG~~~~~~~--------------------------------~~~l~v~~G~r 240 (340)
T 2bw4_A 197 ETPGEAYEDA--VKAM--RTLTPTHIVFNGAVGALTG--------------------------------DHALTAAVGER 240 (340)
T ss_dssp CSHHHHHHHH--HHHH--HTTCCSEEEETTSTTTTSG--------------------------------GGCEEEETTCE
T ss_pred ccccccccch--hhHh--hcCCCCEEEECCccCCccC--------------------------------CCceEcCCCCE
Confidence 000 00000 0000 0011246889998762110 12367888999
Q ss_pred EEEEEEcCCCCCCceeccCCCeEEEeeccCCCCCCCCCCcccCCC-CceeeEEeCCCCEEEEEEEccCcceeeeeecch-
Q 011178 373 AEVVFENPEDTLQSWHIDGHNFFAVGMDGGEWTPASRLTYNLRDT-ISRCTVQVYPKSWTAVYVPLDNVGMWNIRSENW- 450 (491)
Q Consensus 373 v~~~i~N~~~~~HP~HlHG~~F~Vl~~g~g~~~~~~~~~~~~~~p-~~rDTv~v~p~~~~~irf~adnpG~w~~HCHil- 450 (491)
++|++.|.+...|++|+|||.|+|++ +|.+. ..| .++||+.|.+|+.+.|.|++++||.|+||||++
T Consensus 241 ~Rl~n~~~~~~~~~~~i~gh~~~Vi~--dG~~~---------~~p~~~~dtv~l~pGer~~v~v~~~~pG~y~~~~h~~~ 309 (340)
T 2bw4_A 241 VLVVHSQANRDTRPHLIGGHGDYVWA--TGKFR---------NPPDLDQETWLIPGGTAGAAFYTFRQPGVYAYVNHNLI 309 (340)
T ss_dssp EEEEEEESSSCBCEEEETCCEEEEET--TCCTT---------SCCEEEESCCCBCTTEEEEEEEECCSCEEEEEEESSHH
T ss_pred EEEEECCCCCccceEEecCcceEEeC--CCccc---------CCccccceEEEeCCCceEEEEEECCCCeeeEEEcCchH
Confidence 99988888777899999999999986 33221 112 257999999999999999999999999999999
Q ss_pred hhhhcceEEEEEEecCC
Q 011178 451 ARQYLGQQFYLRVYSSA 467 (491)
Q Consensus 451 ~H~d~GMm~~~~V~~~~ 467 (491)
+|++.|||+.|+|....
T Consensus 310 ~h~~~Gm~~~~~V~~~~ 326 (340)
T 2bw4_A 310 EAFELGAAGHFKVTGEW 326 (340)
T ss_dssp HHHTTSCEEEEEEESCC
T ss_pred HHHhCCCEEEEEECCCC
Confidence 69999999999997543
No 45
>1kbv_A ANIA, major outer membrane protein PAN 1; ANIA[NO2-], oxidoreductase; 1.95A {Neisseria gonorrhoeae} SCOP: b.6.1.3 b.6.1.3 PDB: 1kbw_A
Probab=99.85 E-value=1.4e-20 Score=187.30 Aligned_cols=245 Identities=14% Similarity=0.089 Sum_probs=161.0
Q ss_pred ceEEEcCcCCCcceEEEeCCCEEEEEEEEcCCC-CeEeEEEeCceeEEEEecCccCCCCccCeEEEcCCceEEEEEEeCC
Q 011178 142 DGLVINGRGSNANTFTVDQGKTYRFRISNVGIS-TSINFRIQGHKMLLVEVEGTHTLQNTYDSLDIHLGQSYSVLVRADQ 220 (491)
Q Consensus 142 ~~~~vNG~~~~~~~~~v~~g~~~rlR~iN~~~~-~~~~~~i~~~~~~via~DG~~~~p~~~~~l~l~pGeR~dv~v~~~~ 220 (491)
..+++||+.. .|+|++++|+++++|++|.... ..+.++++|.. +.||... ...|.|||++++.+++++
T Consensus 59 ~~~~~ng~~p-gP~i~v~~Gd~v~v~~~N~~~~~~~~~ih~HG~~----~~dG~~~------~~~i~PG~~~~y~f~~~~ 127 (327)
T 1kbv_A 59 RYWTFDGDVP-GRMIRVREGDTVEVEFSNNPSSTVPHNVDFHAAT----GQGGGAA------ATFTAPGRTSTFSFKALQ 127 (327)
T ss_dssp EEEEETTBSS-CCBEEEETTCEEEEEEEECTTCSSCBCCEETTCC----SGGGGTT------TTCBCTTEEEEEEEECCS
T ss_pred EEEEECCccC-CCeEEEeCCCEEEEEEEECCCCCCceeeEeCccc----cCCCCCc------ceeecCCCEEEEEEECCC
Confidence 4789999853 7999999999999999999753 56788888753 5788642 124899999999999985
Q ss_pred CCcceEEEEEeec-cCC-CcceEEEEEecCCCCCCCCCCCCCCCccccchhhhhhhhccCCCCCCCCCCCCCCCCccccc
Q 011178 221 PPQGYYIVISTRF-TSQ-VLSATSVLHYSNSAGSVSGPPPGGPTTQIDWSLEQARSLRRNLTASGPRPNPQGSYHYGLIN 298 (491)
Q Consensus 221 ~~g~~~i~~~~~~-~~~-~~~~~ail~y~~~~~~~~~~~p~~p~~~~~~~~~~~~~~~~~l~~~~~~~~p~~~~~~~~~~ 298 (491)
+|+||..++... ..+ .....+.+.+.... .+|. .+.+..+- .-++....... . .+.
T Consensus 128 -~Gt~wyH~h~~~~~~~~~~Gl~G~~iV~~~~-----~~p~---~d~e~~l~---~~d~~~~~~~~--~-~g~------- 185 (327)
T 1kbv_A 128 -PGLYIYHCAVAPVGMHIANGMYGLILVEPKE-----GLPK---VDKEFYIV---QGDFYTKGKKG--A-QGL------- 185 (327)
T ss_dssp -CEEEEEECCCSSHHHHHHTTCEEEEEEECTT-----CCCC---CSEEEEEE---EEEECBSSCTT--C-CEE-------
T ss_pred -CeEEEEEeCCCChhhhhhcceEEEEEEecCC-----CCCC---CceEEEEE---eeeeeccCccc--c-ccc-------
Confidence 799999876421 011 01223333333321 1221 11110000 00111111000 0 000
Q ss_pred cceEEEEeccccCcCCeEeEEEcCeeeeCCCCccccccccCCCCccccCCCCCCCCCCCcceeeeEEeecCCcEEEEEEE
Q 011178 299 TTHTIRLQNTAPTINGKQRYAVNSVSFIPADTPLKLADYFKIPGVFSVGSIPDNPTGGGAYLQTSVMAADFRGFAEVVFE 378 (491)
Q Consensus 299 ~~~~~~l~~~~~~~~~~~~~~iNg~~f~~~~~p~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~g~~v~~~i~ 378 (491)
..+.+.... ......+.|||+.+... ....++++.|++++|+|.
T Consensus 186 --~~~~~~~~~--~~~~~~~~iNG~~~~~~--------------------------------~~~~l~v~~G~~vRlRli 229 (327)
T 1kbv_A 186 --QPFDMDKAV--AEQPEYVVFNGHVGALT--------------------------------GDNALKAKAGETVRMYVG 229 (327)
T ss_dssp --ECBCHHHHH--HTCCSEEEETTSTTTTS--------------------------------GGGCEEEETTEEEEEEEE
T ss_pred --cccChhHhc--cCCCceEEEcCcccCCC--------------------------------CceeEEeCCCCEEEEEEE
Confidence 000000000 01123578888765210 012367889999999999
Q ss_pred cCCC-CCCceeccCCCeEEEeeccCCCCCCCCCCcccCCCCceeeEEeCCCCEEEEEEEccCcceeeeeecchhhh-hcc
Q 011178 379 NPED-TLQSWHIDGHNFFAVGMDGGEWTPASRLTYNLRDTISRCTVQVYPKSWTAVYVPLDNVGMWNIRSENWARQ-YLG 456 (491)
Q Consensus 379 N~~~-~~HP~HlHG~~F~Vl~~g~g~~~~~~~~~~~~~~p~~rDTv~v~p~~~~~irf~adnpG~w~~HCHil~H~-d~G 456 (491)
|.+. ..|+||||||.|+|++..++. ..|.++||+.|.||+.+.|.|++++||.|++|||++.|. ..|
T Consensus 230 N~~~~~~~~~~l~Gh~f~vi~~DG~~-----------~~p~~~d~l~l~pGer~dv~v~~~~pG~y~l~~h~~~~~~~~g 298 (327)
T 1kbv_A 230 NGGPNLVSSFHVIGEIFDKVYVEGGK-----------LINENVQSTIVPAGGSAIVEFKVDIPGNYTLVDHSIFRAFNKG 298 (327)
T ss_dssp EEESSCCEEEEEETCCBSEEEGGGSS-----------CEECSBSEEEECTTEEEEEEEEECSCEEEEEEESSTHHHHHSS
T ss_pred CCCCCCceeEEEeCCEEEEEEcCCCc-----------CCCCceeEEEECCCCEEEEEEEeCCCeEEEEEeccccccccCC
Confidence 9874 579999999999999996542 125689999999999999999999999999999999995 889
Q ss_pred eEEEEEEecC
Q 011178 457 QQFYLRVYSS 466 (491)
Q Consensus 457 Mm~~~~V~~~ 466 (491)
|++.++|...
T Consensus 299 ~~a~l~~~g~ 308 (327)
T 1kbv_A 299 ALGQLKVEGA 308 (327)
T ss_dssp CEEEEEEESC
T ss_pred cEEEEEECCC
Confidence 9999999643
No 46
>2r7e_B Coagulation factor VIII; ceruloplasmin fold, cupper protein fold, C2 domain fold, ACU blood coagulation, disease mutation, glycoprotein; HET: NAG BMA MAN; 3.70A {Homo sapiens} PDB: 3cdz_B*
Probab=99.84 E-value=3.3e-22 Score=218.55 Aligned_cols=240 Identities=10% Similarity=0.069 Sum_probs=149.5
Q ss_pred cceEEEeCCCEEEEEEEEcCCCCeEeEEEeCceeEEEEecCccCCCCccCeEEEcCCceEEEEEEeCC---------CCc
Q 011178 153 ANTFTVDQGKTYRFRISNVGISTSINFRIQGHKMLLVEVEGTHTLQNTYDSLDIHLGQSYSVLVRADQ---------PPQ 223 (491)
Q Consensus 153 ~~~~~v~~g~~~rlR~iN~~~~~~~~~~i~~~~~~via~DG~~~~p~~~~~l~l~pGeR~dv~v~~~~---------~~g 223 (491)
.|+|+++.|+++++++.|... ..+.+|.+|..+..-.-||.+- ....|.||++++..+++.+ .+|
T Consensus 198 GP~Ir~~~GD~v~v~~~N~l~-~~~siH~HG~~~~~~~~dG~~~-----~~~~I~PG~~~tY~f~~~~~~gp~~~d~~~G 271 (770)
T 2r7e_B 198 GPYIRAEVEDNIMVTFRNQAS-RPYSFYSSLISYEEDQRQGAEP-----RKNFVKPNETKTYFWKVQHHMAPTKDEFDCK 271 (770)
T ss_dssp CCCCCCCSSSCEEEEEECCSS-SCCCCCBTTCCCCCCSSSCTTT-----TSSCCCSSCEEEEECCCCSSSSCCSSCCSEE
T ss_pred CCeEEEEcCCEEEEEEEECCC-CCcceeecccccccccCCCCcC-----ccCccCCCCeEEEEEEecCccCCccCCCCCe
Confidence 699999999999999999975 4778888887654433357642 2346899999999999875 468
Q ss_pred ceEEEEEeeccCCC-cceEEEEEecCCCCCCCCCCCCCCCccccchhhhhhhhc----cCCCCC--CCCCCCCCCCCccc
Q 011178 224 GYYIVISTRFTSQV-LSATSVLHYSNSAGSVSGPPPGGPTTQIDWSLEQARSLR----RNLTAS--GPRPNPQGSYHYGL 296 (491)
Q Consensus 224 ~~~i~~~~~~~~~~-~~~~ail~y~~~~~~~~~~~p~~p~~~~~~~~~~~~~~~----~~l~~~--~~~~~p~~~~~~~~ 296 (491)
+||...+.....+. ....|.|.+........... .+..+.+..+-. ..+. +.+... .....|.. ..
T Consensus 272 t~wYHsh~~~~~q~~~GL~G~liV~~~~~~~~~~~--~~~~d~E~vl~~-~~~de~~swy~~~~~~~~~~~p~~-~~--- 344 (770)
T 2r7e_B 272 AWAYSSDVDLEKDVHSGLIGPLLVCHTNTLNPAHG--RQVTVQEFALFF-TIFDETKSWYFTENMERNCRAPCN-IQ--- 344 (770)
T ss_dssp EEEECCCSSSSHHHHTSCCEEEEEECSTTSCSSSC--CCCSSEEEECCC-CEECCSSSSCTTGGGSSCSCCSSC-CC---
T ss_pred eEEeeccCCcHHHHhCCceeeEEECCCcccccccC--CCccceEEEEEE-eecCccccchhccchhhcccCccc-cc---
Confidence 89887665321111 12233333333221100000 010111100000 0000 000000 00000000 00
Q ss_pred cccceEEEEeccccCcCCeEeEEEcCeeeeCCCCccccccccCCCCccccCCCCCCCCCCCcceeeeEEeecCCcEEEEE
Q 011178 297 INTTHTIRLQNTAPTINGKQRYAVNSVSFIPADTPLKLADYFKIPGVFSVGSIPDNPTGGGAYLQTSVMAADFRGFAEVV 376 (491)
Q Consensus 297 ~~~~~~~~l~~~~~~~~~~~~~~iNg~~f~~~~~p~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~g~~v~~~ 376 (491)
..+.. + ......|.|||+.|.. ...+.++.|++++|+
T Consensus 345 -~~d~~--~------~~~~~~~~ING~~~~~----------------------------------~~~l~v~~Ge~vr~r 381 (770)
T 2r7e_B 345 -MEDPT--F------KENYRFHAINGYIMDT----------------------------------LPGLVMAQDQRIRWY 381 (770)
T ss_dssp -SSSSS--S------TTTSCEECTTSCTTTT----------------------------------CCCCCCCSSSCEEEE
T ss_pred -cCCcc--c------cccCCccccCCccCCC----------------------------------CCCeEEeCCCEEEEE
Confidence 00000 0 0112346777765420 112467889999999
Q ss_pred EEcCCCC--CCceeccCCCeEEEeeccCCCCCCCCCCcccCCCCceeeEEeCCCCEEEEEEEccCcceeeeeecchhhhh
Q 011178 377 FENPEDT--LQSWHIDGHNFFAVGMDGGEWTPASRLTYNLRDTISRCTVQVYPKSWTAVYVPLDNVGMWNIRSENWARQY 454 (491)
Q Consensus 377 i~N~~~~--~HP~HlHG~~F~Vl~~g~g~~~~~~~~~~~~~~p~~rDTv~v~p~~~~~irf~adnpG~w~~HCHil~H~d 454 (491)
|.|.+.. .||||||||.|+|++.+ | .++||+.|.|++++.|+|++|+||.|+||||+++|++
T Consensus 382 liN~g~~~~~H~fHlhGh~f~Vv~~d-g---------------~~~Dtv~l~Pg~~~~v~~~ad~pG~w~~hcH~~~H~~ 445 (770)
T 2r7e_B 382 LLSMGSNENIHSIHFSGHVFTVRKKE-E---------------YKMALYNLYPGVFETVEMLPSKAGIWRVECLIGEHLH 445 (770)
T ss_dssp CCCCCSSSCCCEEEBSSCCEECCSSS-C---------------CEESEEECCTTCCCEEEECCSSCBCCCBCCCSHHHHT
T ss_pred EEeCCCCcceEEEEEcCCEEEEEecC-C---------------ceeeEEEECCCeEEEEEEEeCCCCceEEEeccccccc
Confidence 9998753 79999999999998774 2 2899999999999999999999999999999999999
Q ss_pred cceEEEEEEe
Q 011178 455 LGQQFYLRVY 464 (491)
Q Consensus 455 ~GMm~~~~V~ 464 (491)
.|||..|.|.
T Consensus 446 ~GM~~~~~V~ 455 (770)
T 2r7e_B 446 AGMSTLFLVY 455 (770)
T ss_dssp TBCCCCCCBC
T ss_pred cccccccccc
Confidence 9999999984
No 47
>1mzy_A Copper-containing nitrite reductase; mutant M182T, gating mechanism, electron oxidoreductase; 1.46A {Rhodobacter sphaeroides} SCOP: b.6.1.3 b.6.1.3 PDB: 1mzz_A 1n70_A 1zv2_A 2a3t_A 2dws_A 2dwt_A 2dy2_A
Probab=99.83 E-value=2.5e-19 Score=178.86 Aligned_cols=260 Identities=10% Similarity=0.052 Sum_probs=149.2
Q ss_pred CceEEEcCcCCCcceEEEeCCCEEEEEEEEcCCC-CeEeEEEeCceeEEEEecCccCCCCccCeEEEcCCceEEEEEEeC
Q 011178 141 PDGLVINGRGSNANTFTVDQGKTYRFRISNVGIS-TSINFRIQGHKMLLVEVEGTHTLQNTYDSLDIHLGQSYSVLVRAD 219 (491)
Q Consensus 141 ~~~~~vNG~~~~~~~~~v~~g~~~rlR~iN~~~~-~~~~~~i~~~~~~via~DG~~~~p~~~~~l~l~pGeR~dv~v~~~ 219 (491)
...+++||+.. .|+|++++|+++++|+.|.+.. ..+-+++++.. ..||.. + .. .|.||+++++.++++
T Consensus 52 ~~~~~~ng~~p-gP~i~~~~Gd~v~v~~~N~~~~~h~Hg~~~~~~~----~~~~~~--~--~~--~i~PG~~~~y~f~~~ 120 (333)
T 1mzy_A 52 LQAMTFDGSIP-GPLMIVHEGDYVELTLINPPENTMPHNIDFHAAT----GALGGG--G--LT--LINPGEKVVLRFKAT 120 (333)
T ss_dssp EEEEEETTBSS-CCEEEEETTCEEEEEEEECTTCCSCBCCEETTSC----SGGGGG--G--GC--CBCTTEEEEEEEECC
T ss_pred EEEEEECCccC-CCcEEecCCCEEEEEEEECCCCcccccceecCCC----CCCCCC--c--ee--EeCCCCEEEEEEECC
Confidence 35789999863 7999999999999999999642 23344444321 122221 1 12 399999999999998
Q ss_pred CCCcceEEEEEeec---cCCC-cceEEEEEecCCCCCCCCCCCCCCCccccchhhhhhhhccCCCCCCCCCCCCCCCC-c
Q 011178 220 QPPQGYYIVISTRF---TSQV-LSATSVLHYSNSAGSVSGPPPGGPTTQIDWSLEQARSLRRNLTASGPRPNPQGSYH-Y 294 (491)
Q Consensus 220 ~~~g~~~i~~~~~~---~~~~-~~~~ail~y~~~~~~~~~~~p~~p~~~~~~~~~~~~~~~~~l~~~~~~~~p~~~~~-~ 294 (491)
.+|+||..++... ..+. ....+.+....... ...+.+.....+.+..+. .-+|.+... ..+.+. +
T Consensus 121 -~~Gt~~yH~h~~~~~~~~~~~~Gl~G~~iV~~~~~-~~~~~~~p~~~d~e~~l~---l~D~~~~~~-----~~g~~~~~ 190 (333)
T 1mzy_A 121 -RAGAFVYHCAPGGPMIPWHVVSGMAGCIMVLPRDG-LKDHEGKPVRYDTVYYIG---ESDHYIPKD-----EDGTYMRF 190 (333)
T ss_dssp -SCEEEEEECCCSTTHHHHHHHTTCEEEEEEECTTC-CBCTTSCBCCCSEEEEEE---EEEECCCBC-----TTSCBCCC
T ss_pred -CCEEEEEeecCCcccchhhhhCCCEEEEEEccCcC-ccccccCCCccchheeee---eeeeccCcc-----cccccccc
Confidence 4899999887531 0111 12334333332211 000010000011111000 001111000 000000 0
Q ss_pred cccccceEEEEeccccCcCCeEeEEEcCeeeeCCCCccccccccCCCCccccCCCCCCCCCCCcceeeeEEeecCCcEEE
Q 011178 295 GLINTTHTIRLQNTAPTINGKQRYAVNSVSFIPADTPLKLADYFKIPGVFSVGSIPDNPTGGGAYLQTSVMAADFRGFAE 374 (491)
Q Consensus 295 ~~~~~~~~~~l~~~~~~~~~~~~~~iNg~~f~~~~~p~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~g~~v~ 374 (491)
........-.+... .......|.|||+.+..+ +...+.++.|++++
T Consensus 191 ~~~~~~~~~~~~~~--~~~~~~~~~ING~~~~~~--------------------------------~~~~l~v~~Ger~R 236 (333)
T 1mzy_A 191 SDPSEGYEDMVAVM--DTLIPSHIVFNGAVGALT--------------------------------GEGALKAKVGDNVL 236 (333)
T ss_dssp SSHHHHHHHHHHHH--TTTCCSEEEETTSTTTTS--------------------------------GGGCEEEETTCEEE
T ss_pred ccccccccchhHHh--hccCCcEEEECCcccccC--------------------------------CCcceEecCCCEEE
Confidence 00000000000000 001124688998764210 01226788899999
Q ss_pred EEEEcCCCCCCceeccCCCeEEEeeccCCCCCCCCCCcccCCCC-ceeeEEeCCCCEEEEEEEccCcceeeeeecchhhh
Q 011178 375 VVFENPEDTLQSWHIDGHNFFAVGMDGGEWTPASRLTYNLRDTI-SRCTVQVYPKSWTAVYVPLDNVGMWNIRSENWARQ 453 (491)
Q Consensus 375 ~~i~N~~~~~HP~HlHG~~F~Vl~~g~g~~~~~~~~~~~~~~p~-~rDTv~v~p~~~~~irf~adnpG~w~~HCHil~H~ 453 (491)
|++.|.+...+++++|+|.|.|++ +|.+. ..|. ++||+.|.||+.+.|.|.+++||.|+||||+++|+
T Consensus 237 l~n~~~~~~~~~h~i~~h~~~Vi~--dG~~~---------~~p~~~~dtv~l~pGer~~v~v~a~~pG~y~~~ch~~~h~ 305 (333)
T 1mzy_A 237 FVHSQPNRDSRPHLIGGHGDLVWE--TGKFH---------NAPERDLETWFIRGGTAGAALYKFLQPGVYAYVNHNLIEA 305 (333)
T ss_dssp EEEEESSSCBCEEEETCCEEEEET--TCCTT---------SCCEEEESBCCBCTTEEEEEEEECCSCEEEEEEESSHHHH
T ss_pred EEECCCCCccccEEECCCCeEEEe--CCccc---------CCCccCcceEEECCCceEEEEEEcCCCEEEEEecChhhhH
Confidence 888777655556667888898887 34321 1122 68999999999999999999999999999999997
Q ss_pred -hcceEEEEEEecC
Q 011178 454 -YLGQQFYLRVYSS 466 (491)
Q Consensus 454 -d~GMm~~~~V~~~ 466 (491)
+.|||+.|+|...
T Consensus 306 ~~~Gm~~~~~v~~~ 319 (333)
T 1mzy_A 306 VHKGATAHVLVEGE 319 (333)
T ss_dssp HTTCCEEEEEEESC
T ss_pred hhCCCEEEEEEcCC
Confidence 9999999999754
No 48
>2zoo_A Probable nitrite reductase; electron transfer, electron transport, heme, iron, binding, oxidoreductase, transport; HET: SUC HEM; 1.95A {Pseudoalteromonas haloplanktis}
Probab=99.77 E-value=4e-18 Score=176.84 Aligned_cols=246 Identities=12% Similarity=0.042 Sum_probs=162.0
Q ss_pred ceEEEcCcCCCcceEEEeCCCEEEEEEEEcCC-CCeEeEEEeCceeEEEEecCccCCCCccCeEEEcCCceEEEEEEeCC
Q 011178 142 DGLVINGRGSNANTFTVDQGKTYRFRISNVGI-STSINFRIQGHKMLLVEVEGTHTLQNTYDSLDIHLGQSYSVLVRADQ 220 (491)
Q Consensus 142 ~~~~vNG~~~~~~~~~v~~g~~~rlR~iN~~~-~~~~~~~i~~~~~~via~DG~~~~p~~~~~l~l~pGeR~dv~v~~~~ 220 (491)
..+++||+.. .|+|+++.|+++++|+.|... ...+.+|++|+. ..||... ...|.||+++++.++++
T Consensus 49 ~~~~~ng~~p-gp~i~v~~Gd~v~v~~~N~l~~~~~~~iH~HG~~----~~dG~~~------~~~i~pg~~~~y~f~~~- 116 (442)
T 2zoo_A 49 VFWSFGETVP-GSFIRVREGDEIEFNLSNHPSSKMPHNIDLHAVT----GPGGGAE------SSFTAPGHTSTFNFKAL- 116 (442)
T ss_dssp EEEEETTBSS-CCBEEEETTCEEEEEEEECTTCSSCBCCEETTCC----SGGGGGG------GCCBCTTCEEEEEEECC-
T ss_pred EEEEECCcCC-CCcEEEeCCCEEEEEEEECCCCCCCCCEEecCCc----CCCCCCc------cEEECCCCEEEEEEEcC-
Confidence 4789999863 799999999999999999964 357889999865 3677532 23589999999999998
Q ss_pred CCcceEEEEEeec-cCC-CcceEEEEEecCCCCCCCCCCCCCCCccccchhhhhhhhccCCCCCCCCCCCCCCCCccccc
Q 011178 221 PPQGYYIVISTRF-TSQ-VLSATSVLHYSNSAGSVSGPPPGGPTTQIDWSLEQARSLRRNLTASGPRPNPQGSYHYGLIN 298 (491)
Q Consensus 221 ~~g~~~i~~~~~~-~~~-~~~~~ail~y~~~~~~~~~~~p~~p~~~~~~~~~~~~~~~~~l~~~~~~~~p~~~~~~~~~~ 298 (491)
.+|+||+..+... ..+ .....+.|.+.... .+|. ...+....+. ++.+...... +
T Consensus 117 ~~Gt~~yH~H~~~~~~~~~~Gl~G~~iv~~~~-----~~~~-~d~e~~l~l~-----d~~~~~~~~~--~---------- 173 (442)
T 2zoo_A 117 NPGLYIYHCATAPVGMHIANGMYGLILVEPKE-----GLAP-VDREYYLVQG-----DFYTKGEFGE--A---------- 173 (442)
T ss_dssp SCEEEEEECCCSSHHHHHHTTCEEEEEEECTT-----CCCC-CSEEEEEEEE-----EECBSSCTTC--C----------
T ss_pred CCeEEEEecCCCChHHHHhCccEEEEEEeCCC-----CCCC-CCceEEEEee-----eeeccCcccc--c----------
Confidence 5899999875311 011 11234445554322 1111 0011110110 1111110000 0
Q ss_pred cceEEEEeccccCcCCeEeEEEcCeeeeCCCCccccccccCCCCccccCCCCCCCCCCCcceeeeEEeecCCcEEEEEEE
Q 011178 299 TTHTIRLQNTAPTINGKQRYAVNSVSFIPADTPLKLADYFKIPGVFSVGSIPDNPTGGGAYLQTSVMAADFRGFAEVVFE 378 (491)
Q Consensus 299 ~~~~~~l~~~~~~~~~~~~~~iNg~~f~~~~~p~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~g~~v~~~i~ 378 (491)
....+.+.... ......+.|||+.+... ....+.++.|++++|+|.
T Consensus 174 ~~~~~~~~~~~--~~~~~~~liNG~~~~~~--------------------------------~~~~l~v~~G~~vrlrli 219 (442)
T 2zoo_A 174 GLQPFDMAKAI--DEDADYVVFNGSVGSTT--------------------------------DENSLTAKVGETVRLYIG 219 (442)
T ss_dssp EEECBCHHHHH--TTCCSEEEETTSTTTTS--------------------------------GGGCEEEETTCEEEEEEE
T ss_pred ccccCChhHhc--cCCCCEEEECCCcCCCC--------------------------------CCCceEeCCCCEEEEEEE
Confidence 00000000000 01123577888764210 002357788999999999
Q ss_pred cCCC-CCCceeccCCCeEEEeeccCCCCCCCCCCcccCCCCceeeEEeCCCCEEEEEEEccCcceeeeeecchhh-hhcc
Q 011178 379 NPED-TLQSWHIDGHNFFAVGMDGGEWTPASRLTYNLRDTISRCTVQVYPKSWTAVYVPLDNVGMWNIRSENWAR-QYLG 456 (491)
Q Consensus 379 N~~~-~~HP~HlHG~~F~Vl~~g~g~~~~~~~~~~~~~~p~~rDTv~v~p~~~~~irf~adnpG~w~~HCHil~H-~d~G 456 (491)
|.+. ..|+||+||+.|.|++..++. ..|.+.|++.|.||+.+.|.|+++.||.|++|||.+.| .+.|
T Consensus 220 N~~~~~~~~~~i~g~~~~vi~~DG~~-----------~~p~~~~~~~l~pg~r~~v~v~~~~~G~y~~~~~~~~~~~~~g 288 (442)
T 2zoo_A 220 NGGPNLVSSFHVIGEIFDTVYVEGGS-----------LKNHNVQTTLIPAGGAAIVEFKVEVPGTFILVDHSIFRAFNKG 288 (442)
T ss_dssp EEESSCCEEEEEETCCBSEEEGGGSS-----------CEECSBSEEEECTTEEEEEEEECCSCEEEEEEESSTHHHHTTS
T ss_pred eCCCCCceeeEEcCCEEEEEecCCcc-----------CCCccceEEEECCCeeEEEEEEcCCCCeEEEEecccccccccC
Confidence 9764 579999999999999986431 12568899999999999999999999999999999999 5999
Q ss_pred eEEEEEEecCC
Q 011178 457 QQFYLRVYSSA 467 (491)
Q Consensus 457 Mm~~~~V~~~~ 467 (491)
||+.++|...+
T Consensus 289 ~~a~l~v~~~~ 299 (442)
T 2zoo_A 289 ALAMLKVEGPD 299 (442)
T ss_dssp CEEEEEEESCC
T ss_pred ceEEEEecCCC
Confidence 99999997544
No 49
>1oe1_A Dissimilatory copper-containing nitrite reductase; denitrification; HET: PG4; 1.04A {Alcaligenes xylosoxidans} SCOP: b.6.1.3 b.6.1.3 PDB: 1oe3_A* 2xwz_A* 2vn3_A 2zon_A* 1haw_A 1hau_A* 2vm4_A* 2vw4_A* 2vw6_A* 2vw7_A* 2vm3_A* 1oe2_A* 2jl0_A* 2xx1_A 2xxg_A* 2xxf_A* 1gs8_A 1wa1_X* 1wa2_X* 2jl3_A* ...
Probab=99.76 E-value=3.1e-17 Score=163.99 Aligned_cols=258 Identities=14% Similarity=0.174 Sum_probs=152.8
Q ss_pred ceEEEcCcCCCcceEEEeCCCEEEEEEEEcCC-CCeEeEEEeCceeEEEEecCccCCCCccCeEEEcCCceEEEEEEeCC
Q 011178 142 DGLVINGRGSNANTFTVDQGKTYRFRISNVGI-STSINFRIQGHKMLLVEVEGTHTLQNTYDSLDIHLGQSYSVLVRADQ 220 (491)
Q Consensus 142 ~~~~vNG~~~~~~~~~v~~g~~~rlR~iN~~~-~~~~~~~i~~~~~~via~DG~~~~p~~~~~l~l~pGeR~dv~v~~~~ 220 (491)
..+++||+.. .|+|++++|+++++|+.|... ...+.++++++.. .||.. + +. .|.||++++..+++++
T Consensus 54 ~~~~~ng~~p-gP~i~v~~Gd~v~v~~~N~~~~~~~h~~~~h~~~~----~~~~~--~--~~--~i~pG~~~~y~f~~~~ 122 (336)
T 1oe1_A 54 QAMTFNGSMP-GPTLVVHEGDYVQLTLVNPATNAMPHNVDFHGATG----ALGGA--K--LT--NVNPGEQATLRFKADR 122 (336)
T ss_dssp EEEEETTBSS-CCCEEEETTCEEEEEEEECTTCCSCBCCEETTSCS----GGGGG--G--GC--CBCTTEEEEEEEECCS
T ss_pred EEEEECCccC-CCeEEEcCCCEEEEEEEcCCCCCccccceECCCCC----CCCCc--c--eE--EeCCCCEEEEEEECCC
Confidence 5789999853 799999999999999999874 2567788888652 23331 1 11 3899999999999985
Q ss_pred CCcceEEEEEeecc--CC-CcceEEEEEecCCCCCCCCCCCCCCCccccchhhhhhhhccCCCCCCCCCCCCCCC-Cccc
Q 011178 221 PPQGYYIVISTRFT--SQ-VLSATSVLHYSNSAGSVSGPPPGGPTTQIDWSLEQARSLRRNLTASGPRPNPQGSY-HYGL 296 (491)
Q Consensus 221 ~~g~~~i~~~~~~~--~~-~~~~~ail~y~~~~~~~~~~~p~~p~~~~~~~~~~~~~~~~~l~~~~~~~~p~~~~-~~~~ 296 (491)
+|+||...+.... .+ .....+.|.+..... ...+.+.....+.+..+. .-+|.+... ..+.+ .+..
T Consensus 123 -~Gt~~yH~h~~~~~~~~~~~Gl~G~liV~~~~~-~~~~~~~~~~~D~e~~l~---~~D~~~~~~-----~~g~~~~~~~ 192 (336)
T 1oe1_A 123 -SGTFVYHCAPEGMVPWHVVSGMSGTLMVLPRDG-LKDPQGKPLHYDRAYTIG---EFDLYIPKG-----PDGKYKDYAT 192 (336)
T ss_dssp -CEEEEEECCCTTCHHHHHHTTCEEEEEEECTTC-CBCTTSCBCCCSEEEEEE---EEEECCCBC-----TTSSBCCCSS
T ss_pred -CeEEEEecCCCCchhHHHhCCCeEEEEEecCcC-CcccccCcccCCceeEee---eeeeeeccc-----cCCceeeccc
Confidence 8999998875310 01 112334333332211 001111100011110000 001111000 00000 0000
Q ss_pred c-ccceEEEEeccccCcCCeEeEEEcCeeeeCCCCccccccccCCCCccccCCCCCCCCCCCcceeeeEEeecCCcEEEE
Q 011178 297 I-NTTHTIRLQNTAPTINGKQRYAVNSVSFIPADTPLKLADYFKIPGVFSVGSIPDNPTGGGAYLQTSVMAADFRGFAEV 375 (491)
Q Consensus 297 ~-~~~~~~~l~~~~~~~~~~~~~~iNg~~f~~~~~p~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~g~~v~~ 375 (491)
. ..... .+.... ......+.|||+.+... +...+.++.|++++|
T Consensus 193 ~~~~~~~-~~~~~~--~~~~~~~liNG~~~~~~--------------------------------~~~~l~v~~GervRl 237 (336)
T 1oe1_A 193 LAESYGD-TVQVMR--TLTPSHIVFNGKVGALT--------------------------------GANALTAKVGETVLL 237 (336)
T ss_dssp TGGGHHH-HHHHHH--TTCCSEEEETTSTTTTS--------------------------------GGGCEEEETTCEEEE
T ss_pred ccccccc-hhhHhh--cCCCCEEEECCeeccCC--------------------------------CCcceEcCCCCEEEE
Confidence 0 00000 000000 00123577887754210 012367889999998
Q ss_pred EEEcCCCCCCceeccCCCeEEEeeccCCCCCCCCCCcccCCC-CceeeEEeCCCCEEEEEEEccCcceeeeeecchhhh-
Q 011178 376 VFENPEDTLQSWHIDGHNFFAVGMDGGEWTPASRLTYNLRDT-ISRCTVQVYPKSWTAVYVPLDNVGMWNIRSENWARQ- 453 (491)
Q Consensus 376 ~i~N~~~~~HP~HlHG~~F~Vl~~g~g~~~~~~~~~~~~~~p-~~rDTv~v~p~~~~~irf~adnpG~w~~HCHil~H~- 453 (491)
+..+.....+++++|||.|.|++ +|.+- ..| .+.||+.|++|+.+.+.|.+++||.|+||||.+.|.
T Consensus 238 in~~~~~~~~~~~i~gh~~~Vi~--DG~~~---------~p~~~~~dtv~i~pGer~dvlv~~~~pG~y~~~~h~~~~~~ 306 (336)
T 1oe1_A 238 IHSQANRDTRPHLIGGHGDWVWE--TGKFA---------NPPQRDLETWFIRGGSAGAALYTFKQPGVYAYLNHNLIEAF 306 (336)
T ss_dssp EEEESSSCBCEEETTCCEEEEET--TCCTT---------SCCEEEESBCCBCTTEEEEEEEECCSCEEEEEEESSHHHHH
T ss_pred EecCCCCccceEEECCcCceEeC--CCcCc---------CCccccceEEEECCCCcEEEEEEcCCCceEEEEechhhccc
Confidence 76666655677778999999986 34321 112 257999999999999999999999999999999986
Q ss_pred hcceEEEEEEecC
Q 011178 454 YLGQQFYLRVYSS 466 (491)
Q Consensus 454 d~GMm~~~~V~~~ 466 (491)
+.||++.|+|...
T Consensus 307 ~~G~~~~~~V~~~ 319 (336)
T 1oe1_A 307 ELGAAGHIKVEGK 319 (336)
T ss_dssp TTSCEEEEEEESC
T ss_pred cCCCeEEEEECCC
Confidence 9999999999754
No 50
>3cvb_A Plastocyanin; cupredoxin, SELF assembly, copper, electron transport, metal-binding, transport; 1.40A {Phormidium laminosum} PDB: 3cvc_A 3cvd_A 2w8c_A 2w88_A 2q5b_A 1baw_A 3bqv_A
Probab=99.49 E-value=7e-15 Score=121.06 Aligned_cols=87 Identities=17% Similarity=0.214 Sum_probs=65.2
Q ss_pred cCCCCeEEEe--eeEEEEEEecCCCCCeeeecccCCCCC--CCCCCCCCCCCCCCCCCeEEEEEEeCCCccceeEeCCcc
Q 011178 8 SSLGCSLITH--LYTHLVVLNFIYMAPLITLNGVQQRRN--SWQDGVYGTNCPIPPGKNFTYVLQVKDQIGSYFYFPSLA 83 (491)
Q Consensus 8 ~~~G~~l~v~--d~v~i~~~N~l~~~~siH~HG~~~~~~--~~~DG~~~~q~~i~PG~~~~Y~f~~~~~~Gt~wYH~H~~ 83 (491)
...+++|+|. |+| +++|..+.++++||||..++.. ..+||...+++.|.||++++|+|++++++|+||||||
T Consensus 15 ~f~p~~i~v~~Gd~V--~~~N~~~~~H~v~~~~~~~~~~~g~~~~~~~~~~~~i~pG~~~~~~f~~~~~~G~y~y~C~-- 90 (105)
T 3cvb_A 15 QFEPANVTVHPGDTV--KWVNNKLPPHNILFDDKQVPGASKELADKLSHSQLMFSPGESYEITFSSDFPAGTYTYYCA-- 90 (105)
T ss_dssp CEESSEEEECTTEEE--EEEECSSCCEEEEECTTSSGGGCHHHHHHHCEEEEECSTTCEEEEEECTTSCSEEEEEECT--
T ss_pred EEeCCEEEEcCCCEE--EEEECCCCCCeEEEeCCCCCcccccccccccccccccCCCCeEEEEEecCCCCeeEEEEeC--
Confidence 3456777764 555 4679988999999999875321 0123332345779999999999998558999999999
Q ss_pred ccccCCceeEEEEec
Q 011178 84 FHKAAGGYGGIKIAS 98 (491)
Q Consensus 84 ~q~~~Gl~G~liV~~ 98 (491)
.+...||.|.|+|++
T Consensus 91 ~H~~~GM~G~i~V~~ 105 (105)
T 3cvb_A 91 PHRGAGMVGKITVEG 105 (105)
T ss_dssp TTGGGTCEEEEEECC
T ss_pred CchhcCCEEEEEEcC
Confidence 456789999999974
No 51
>2aan_A Auracyanin A; cupredoxin fold, electron transport; 1.85A {Chloroflexus aurantiacus}
Probab=99.22 E-value=1.1e-11 Score=107.35 Aligned_cols=93 Identities=13% Similarity=0.058 Sum_probs=72.1
Q ss_pred EEeecCCcEEEEEEEcCCCC-CCceeccCCCeEEEe------eccC---CCCCCCCCCcccCCCCceeeEEeCCCCEEEE
Q 011178 364 VMAADFRGFAEVVFENPEDT-LQSWHIDGHNFFAVG------MDGG---EWTPASRLTYNLRDTISRCTVQVYPKSWTAV 433 (491)
Q Consensus 364 ~~~~~~g~~v~~~i~N~~~~-~HP~HlHG~~F~Vl~------~g~g---~~~~~~~~~~~~~~p~~rDTv~v~p~~~~~i 433 (491)
.++++.|++|+|+|.|.+.+ .|.||+|+..+.+.. ...+ .+.+. -....++||..|.|++...|
T Consensus 36 ~i~v~~G~~V~~~~~N~~~~~~H~~~i~~~~~~~~~~~~~~~~~~g~~~~~~p~------~~~~~~~~t~~l~pGet~~v 109 (139)
T 2aan_A 36 ELTVSAGQTVTIRFKNNSAVQQHNWILVKGGEAEAANIANAGLSAGPAANYLPA------DKSNIIAESPLANGNETVEV 109 (139)
T ss_dssp EEEECTTCEEEEEEECCCSSCCBCCEEESSCHHHHHHHHHHHHHHCGGGTTCCS------CCTTEEEECCCBCTTCEEEE
T ss_pred eEEECCCCEEEEEEEeCCCCCCeeEEEeccccccchhhhhhhhcccccccccCc------ccccccccccccCCCCEEEE
Confidence 36789999999999999888 899999986532110 0001 11111 01235789999999999999
Q ss_pred EEEccCcceeeeeecchhhhhcceEEEEEE
Q 011178 434 YVPLDNVGMWNIRSENWARQYLGQQFYLRV 463 (491)
Q Consensus 434 rf~adnpG~w~~HCHil~H~d~GMm~~~~V 463 (491)
.|.+++||.|.||||+..|.. ||+..+.|
T Consensus 110 ~f~~~~pG~y~f~C~~~~H~~-GM~G~i~V 138 (139)
T 2aan_A 110 TFTAPAAGTYLYICTVPGHYP-LMQGKLVV 138 (139)
T ss_dssp EEECCSSEEEEEECCSTTTTT-TSEEEEEE
T ss_pred EEECCCCeEEEEEcCCCChHH-cCEEEEEE
Confidence 999999999999999999999 99999987
No 52
>3kw8_A Laccase, putative copper oxidase; two-domain laccase, oxidoreductase, multicopper blue protein; HET: PG4 PGE; 2.29A {Streptomyces coelicolor} PDB: 4gxf_A* 4gy4_A*
Probab=99.22 E-value=1.4e-11 Score=119.33 Aligned_cols=90 Identities=14% Similarity=0.192 Sum_probs=71.4
Q ss_pred CCCeEEE--eeeEEEEEEecCCCCCeeeecccCCCCCCCCCCCC--------C-CCCCCCCCCeEEEEEEeCC--Cccce
Q 011178 10 LGCSLIT--HLYTHLVVLNFIYMAPLITLNGVQQRRNSWQDGVY--------G-TNCPIPPGKNFTYVLQVKD--QIGSY 76 (491)
Q Consensus 10 ~G~~l~v--~d~v~i~~~N~l~~~~siH~HG~~~~~~~~~DG~~--------~-~q~~i~PG~~~~Y~f~~~~--~~Gt~ 76 (491)
.++.|++ |++|+|+|.|.....+++||||...... .+|.. . ..+.|.||++++|.|++.+ .+|+|
T Consensus 166 ~~p~i~v~~G~~vri~l~N~~~~~Hp~HlHG~~f~v~--~~G~~~~p~~~~~~~Dtv~v~pg~~~~~~~~~~~~~npG~w 243 (276)
T 3kw8_A 166 TGPDFEATVGDRVEIVMITHGEYYHTFHMHGHRWADN--RTGILTGPDDPSRVIDNKITGPADSFGFQIIAGEGVGAGAW 243 (276)
T ss_dssp CCCCEEEETTCEEEEEEEEESSCCEEEEETTCCEESS--SSSSCCSTTCCCCEESEEEECTTCEEEEEEETTTTTCSEEE
T ss_pred CCCCEEEecCCEEEEEEecCCCcceeEEEccceeEEe--ccCccCCCcccccCCccEEeCCCceEEEEEEeccCCCCCeE
Confidence 4555554 4788999999999999999999754322 24421 1 3356999999999999952 69999
Q ss_pred eEeCCccccccCCceeEEEEecCCC
Q 011178 77 FYFPSLAFHKAAGGYGGIKIASRPL 101 (491)
Q Consensus 77 wYH~H~~~q~~~Gl~G~liV~~~~~ 101 (491)
|||||...+...||.|.|+|++++.
T Consensus 244 ~~HCH~~~H~~~GM~g~~~V~~~~~ 268 (276)
T 3kw8_A 244 MYHCHVQSHSDMGMVGLFLVKKPDG 268 (276)
T ss_dssp EEEECSHHHHHTTCEEEEEEECTTS
T ss_pred EEECCCchHhhCCCeEEEEEeCCCC
Confidence 9999999999999999999998764
No 53
>2cal_A Rusticyanin; iron respiratory electron transport chain, blue protein, electron transport, metal- binding, periplasmic; 1.10A {Thiobacillus ferrooxidans} PDB: 1cur_A 1gy2_A 1a3z_A 1e30_A 1gy1_A 1rcy_A 1a8z_A 2cak_A
Probab=99.22 E-value=2e-11 Score=107.12 Aligned_cols=84 Identities=15% Similarity=0.156 Sum_probs=63.3
Q ss_pred CCCeEEE--eeeEEEEEEecCCCCCeeeecccCCCCCCCCCCC------CCC--CCCCCCCC--eEEEEEEeCCCcccee
Q 011178 10 LGCSLIT--HLYTHLVVLNFIYMAPLITLNGVQQRRNSWQDGV------YGT--NCPIPPGK--NFTYVLQVKDQIGSYF 77 (491)
Q Consensus 10 ~G~~l~v--~d~v~i~~~N~l~~~~siH~HG~~~~~~~~~DG~------~~~--q~~i~PG~--~~~Y~f~~~~~~Gt~w 77 (491)
.+++|+| ||+|+++++|... ...|.+.+...+.++.+.. ..+ ...|.||+ +++|+|++ ++||||
T Consensus 59 ~~p~i~V~~GD~V~~~~tN~~~--~~~H~~~i~~~~~~~~~~~~~~~~~~~~~~~~~i~PG~sgt~t~tft~--~pGtY~ 134 (154)
T 2cal_A 59 KNPTLEIPAGATVDVTFINTNK--GFGHSFDITKKGPPYAVMPVIDPIVAGTGFSPVPKDGKFGYTDFTWHP--TAGTYY 134 (154)
T ss_dssp ESCEEEECTTCEEEEEEEECCT--TCCCCCEEESCCSCCCSSCCCCSEEEEBCCCCCCBTTBEEEEEEEECC--CSEEEE
T ss_pred CCCEEEEeCCCEEEEEEEcCCC--CeeeEEEEeecCcchhccccccccccccccccccCCCCceEEEEEEEE--CCceEE
Confidence 4588877 4889999999732 4577777775555443211 110 12689999 99999997 799999
Q ss_pred EeCCccccccCCceeEEEEe
Q 011178 78 YFPSLAFHKAAGGYGGIKIA 97 (491)
Q Consensus 78 YH~H~~~q~~~Gl~G~liV~ 97 (491)
||||...|...||+|.|+|+
T Consensus 135 y~C~~~gH~~~GM~G~IiV~ 154 (154)
T 2cal_A 135 YVCQIPGMAATGMFGKIVVK 154 (154)
T ss_dssp EECCSTTTGGGTCEEEEEEC
T ss_pred EECCCCCHHHCCCEEEEEEC
Confidence 99998888999999999985
No 54
>2xu9_A Laccase; oxidoreductase, multicopper oxidases; 1.50A {Thermus thermophilus} PDB: 2xuw_A 2xvb_A 2yae_A 2yaf_A 2yah_A 2yam_A 2yao_A 2yap_A 2yaq_A 2yar_A 4ai7_A
Probab=99.22 E-value=4.4e-10 Score=116.00 Aligned_cols=191 Identities=13% Similarity=0.138 Sum_probs=130.7
Q ss_pred eEEEEEEecCCC-CCeeeecccCCCCCCCCCCCCC------CCCCCCCCCeEEEEEEeCCCccceeEeCCcccc--cc-C
Q 011178 19 YTHLVVLNFIYM-APLITLNGVQQRRNSWQDGVYG------TNCPIPPGKNFTYVLQVKDQIGSYFYFPSLAFH--KA-A 88 (491)
Q Consensus 19 ~v~i~~~N~l~~-~~siH~HG~~~~~~~~~DG~~~------~q~~i~PG~~~~Y~f~~~~~~Gt~wYH~H~~~q--~~-~ 88 (491)
++++|+.|.... ...+|++|..... -..||.+. ....|.||++++..+++. ++|.||++|+.... .. .
T Consensus 196 ~~RlRliN~~~~~~~~~~i~gh~~~v-i~~DG~~~~~p~~~~~l~l~pgeR~dv~v~~~-~~G~~~l~~~~~~~~~~~~~ 273 (439)
T 2xu9_A 196 TLRLRLLNASNARYYRLALQDHPLYL-IAADGGFLEEPLEVSELLLAPGERAEVLVRLR-KEGRFLLQALPYDRGAMGMM 273 (439)
T ss_dssp EEEEEEEECCSSCCEEEEETTBCEEE-EEETTEEEEEEEEESCEEECTTCEEEEEEECC-SSEEEEEEEECCCCCCEEEE
T ss_pred eEEEEEEecCCCceEEEEECCceEEE-EecCCCCCCCceEeceEEECCceeEEEEEEcC-CCceEEEEecccccCCcccc
Confidence 668889999764 5689999975432 23688752 235599999999999995 69999999984311 10 1
Q ss_pred Cc--------------eeEEE--EecCCCCCCCCCCC---CCc-------ceEEeeecccCCHHHHHHHHhcCCCCCCCc
Q 011178 89 GG--------------YGGIK--IASRPLIPVPFDPP---AGD-------FTILAGDWYKKNHTDLKAILDSGSDLPFPD 142 (491)
Q Consensus 89 Gl--------------~G~li--V~~~~~~~~~~~~~---~~e-------~~l~l~d~~~~~~~~~~~~~~~~~~~~~~~ 142 (491)
|| ....+ +.+.. .+.+.+.. ..+ ..+.|.- . + .+.
T Consensus 274 ~~~~~~~~~~~~~~~~~~~~~l~~~~~~-~~~~~p~~l~~~~~l~~~~~~r~~~l~~-----~------~-------~g~ 334 (439)
T 2xu9_A 274 DMGGMAHAMPQGPSRPETLLYLIAPKNP-KPLPLPKALSPFPTLPAPVVTRRLVLTE-----D------M-------MAA 334 (439)
T ss_dssp CSSSCCEEEECCSCCCEEEEEEEECSSC-CCCCCCSCCCCCCCCCCCSEEEEEEEEE-----E------G-------GGT
T ss_pred ccccccccccCCCCCcceeEEEEecCCC-ccccCcccCCCcccCCCCCcceEEEEEe-----e------c-------cCc
Confidence 22 11222 22211 11111100 000 0111110 0 0 113
Q ss_pred eEEEcCcCCCc--ceEEEeCCCEEEEEEEEcCCCCeEeEEEeCceeEEEEecCccC-CCCccCeEEEcCCceEEEEEEeC
Q 011178 143 GLVINGRGSNA--NTFTVDQGKTYRFRISNVGISTSINFRIQGHKMLLVEVEGTHT-LQNTYDSLDIHLGQSYSVLVRAD 219 (491)
Q Consensus 143 ~~~vNG~~~~~--~~~~v~~g~~~rlR~iN~~~~~~~~~~i~~~~~~via~DG~~~-~p~~~~~l~l~pGeR~dv~v~~~ 219 (491)
.++|||+.+.. +.+.++.|++++|+|.|.+. ..+.||++||.|+|++.+|... .|...|++.+.||+++.|.++++
T Consensus 335 ~~~iNg~~~~~~~~~~~~~~g~~~~~~~~N~~~-~~HP~HLHG~~F~Vl~~~g~~~~~p~~rDTv~v~p~~~v~i~f~ad 413 (439)
T 2xu9_A 335 RFFINGQVFDHRRVDLKGQAQTVEVWEVENQGD-MDHPFHLHVHPFQVLSVGGRPFPYRAWKDVVNLKAGEVARLLVPLR 413 (439)
T ss_dssp EEEETTBCCCTTCCCEEECTTCEEEEEEEECSS-SCEEEEESSCCBEEEEETTEECSSCCCBSEEEECTTCEEEEEEECC
T ss_pred eEeECCEECCCCCCceecCCCCEEEEEEEcCCC-CCCCceeCCCcEEEEeeCCCCCCCCCCeEEEEeCCCCEEEEEEEcC
Confidence 68899998632 45899999999999999975 4899999999999999999865 57788999999999999999987
Q ss_pred CCCcceEEEEEee
Q 011178 220 QPPQGYYIVISTR 232 (491)
Q Consensus 220 ~~~g~~~i~~~~~ 232 (491)
.+|.|.+.++..
T Consensus 414 -npG~w~~HCHil 425 (439)
T 2xu9_A 414 -EKGRTVFHCHIV 425 (439)
T ss_dssp -SCEEEEEEESSH
T ss_pred -CCCCEEEECCcc
Confidence 789888887754
No 55
>3cvb_A Plastocyanin; cupredoxin, SELF assembly, copper, electron transport, metal-binding, transport; 1.40A {Phormidium laminosum} PDB: 3cvc_A 3cvd_A 2w8c_A 2w88_A 2q5b_A 1baw_A 3bqv_A
Probab=99.21 E-value=5e-11 Score=97.71 Aligned_cols=85 Identities=11% Similarity=0.019 Sum_probs=66.5
Q ss_pred eEEeecCCcEEEEEEEcCCCCCCceeccCCCeEEEeeccCCCCCCCCCCcccCCCCceeeEEeCCCCEEEEEEEc-cCcc
Q 011178 363 SVMAADFRGFAEVVFENPEDTLQSWHIDGHNFFAVGMDGGEWTPASRLTYNLRDTISRCTVQVYPKSWTAVYVPL-DNVG 441 (491)
Q Consensus 363 ~~~~~~~g~~v~~~i~N~~~~~HP~HlHG~~F~Vl~~g~g~~~~~~~~~~~~~~p~~rDTv~v~p~~~~~irf~a-dnpG 441 (491)
..+.++.|++|+| .|.+...|+||+||..|... .|.. .+....++..+.||+...++|.+ +.||
T Consensus 19 ~~i~v~~Gd~V~~--~N~~~~~H~v~~~~~~~~~~---~g~~----------~~~~~~~~~~i~pG~~~~~~f~~~~~~G 83 (105)
T 3cvb_A 19 ANVTVHPGDTVKW--VNNKLPPHNILFDDKQVPGA---SKEL----------ADKLSHSQLMFSPGESYEITFSSDFPAG 83 (105)
T ss_dssp SEEEECTTEEEEE--EECSSCCEEEEECTTSSGGG---CHHH----------HHHHCEEEEECSTTCEEEEEECTTSCSE
T ss_pred CEEEEcCCCEEEE--EECCCCCCeEEEeCCCCCcc---cccc----------cccccccccccCCCCeEEEEEecCCCCe
Confidence 3478899999876 47777889999999876431 0100 00012588999999999999998 7999
Q ss_pred eeeeeecchhhhhcceEEEEEEe
Q 011178 442 MWNIRSENWARQYLGQQFYLRVY 464 (491)
Q Consensus 442 ~w~~HCHil~H~d~GMm~~~~V~ 464 (491)
.|.|||| .|...||+..+.|.
T Consensus 84 ~y~y~C~--~H~~~GM~G~i~V~ 104 (105)
T 3cvb_A 84 TYTYYCA--PHRGAGMVGKITVE 104 (105)
T ss_dssp EEEEECT--TTGGGTCEEEEEEC
T ss_pred eEEEEeC--CchhcCCEEEEEEc
Confidence 9999999 69999999999885
No 56
>2uxt_A Protein SUFI, SUFI; oxidoreductase, periplasmic, cupredoxin-like, FTS mutant suppressor; 1.90A {Escherichia coli} PDB: 2uxv_A
Probab=99.18 E-value=2.3e-10 Score=118.46 Aligned_cols=196 Identities=15% Similarity=0.104 Sum_probs=119.9
Q ss_pred eEEEEEEecCCC-CCeeee-cccCCCCCCCCCCCC----C--CCCCCCCCCeEEEEEEeCCCccceeEeCCccccccCCc
Q 011178 19 YTHLVVLNFIYM-APLITL-NGVQQRRNSWQDGVY----G--TNCPIPPGKNFTYVLQVKDQIGSYFYFPSLAFHKAAGG 90 (491)
Q Consensus 19 ~v~i~~~N~l~~-~~siH~-HG~~~~~~~~~DG~~----~--~q~~i~PG~~~~Y~f~~~~~~Gt~wYH~H~~~q~~~Gl 90 (491)
++++||.|.... ...+|+ ||..... -..||.+ . .+..|.||++++..++++ +.|+||++++........+
T Consensus 201 ~~RlRliNa~~~~~~~~~i~dg~~~~v-i~~DG~~~~~P~~~~~l~l~pgeR~dvlv~~~-~~~~~~l~~~~~~~~~~~~ 278 (451)
T 2uxt_A 201 WVRLRLLNASNSRRYQLQMNDGRPLHV-ISGDQGFLPAPVSVKQLSLAPGERREILVDMS-NGDEVSITCGEAASIVDRI 278 (451)
T ss_dssp EEEEEEEECCSSCCEEEEETTSCCEEE-EECSSSEEEEEEEESSEEECTTCEEEEEEECT-TCCCEEEEC----------
T ss_pred EEEEEEEccCCceeEEEEECCCCeEEE-EEeCCCccCCceEeceEEECceeEEEEEEEeC-CCCEEEEEecCcccccccc
Confidence 678889999864 567999 8865321 1378863 2 456799999999999996 6899999998653221111
Q ss_pred e-----------eEEE-EecCCCCCCCCCCCCCcceEEeeecccCCH-HHHHHHHhcCCCCCCCceEEEcCcCCC--cce
Q 011178 91 Y-----------GGIK-IASRPLIPVPFDPPAGDFTILAGDWYKKNH-TDLKAILDSGSDLPFPDGLVINGRGSN--ANT 155 (491)
Q Consensus 91 ~-----------G~li-V~~~~~~~~~~~~~~~e~~l~l~d~~~~~~-~~~~~~~~~~~~~~~~~~~~vNG~~~~--~~~ 155 (491)
. .+++ +....... +. ..+++..|..+..... ......+.-. ..++|||+.+. .+.
T Consensus 279 ~~~~~~~~~~~~~~il~~~~~~~~~-~~---~~~~p~~L~~~~~~~~~~~~~~~~~l~------~~~~iNg~~f~~~~~~ 348 (451)
T 2uxt_A 279 RGFFEPSSILVSTLVLTLRPTGLLP-LV---TDSLPMRLLPTEIMAGSPIRSRDISLG------DDPGINGQLWDVNRID 348 (451)
T ss_dssp ------CCCCSCCEEEEEEECSCCC--------CCCSCSSSSCCCCCCCSEEEEEEEC------SSSSBTTBCCCTTCCC
T ss_pred ccccccCCCCCCcceEEEEecCCCc-Cc---cccCccccCCCCCCCCCCcceEEEEEe------eEEEECCEeCCCCCCc
Confidence 1 1111 11111000 00 0000000000000000 0000000000 03578999863 346
Q ss_pred EEEeCCCEEEEEEEEcCCCCeEeEEEeCceeEEEEecCccC---CCCccCeEEEcCCceEEEEEEeCCCCcc----eEEE
Q 011178 156 FTVDQGKTYRFRISNVGISTSINFRIQGHKMLLVEVEGTHT---LQNTYDSLDIHLGQSYSVLVRADQPPQG----YYIV 228 (491)
Q Consensus 156 ~~v~~g~~~rlR~iN~~~~~~~~~~i~~~~~~via~DG~~~---~p~~~~~l~l~pGeR~dv~v~~~~~~g~----~~i~ 228 (491)
+.++.|++++|+|+|. ..+.|||+||.|+|++.||.+. +|...|++.+ |+++.|.|+++ .+|. |.+.
T Consensus 349 ~~~~~G~~~~~~l~N~---~~HP~HLHGh~F~Vl~~~G~~~~~~~p~~rDTv~v--g~~~~i~~~~d-npg~~~g~w~~H 422 (451)
T 2uxt_A 349 VTAQQGTWERWTVRAD---EPQAFHIEGVMFQIRNVNGAMPFPEDRGWKDTVWV--DGQVELLVYFG-QPSWAHFPFYFN 422 (451)
T ss_dssp EEEETTCEEEEEEEEE---EEEEEEETTCEEEEEEETTBCCCGGGSSCBSEEEE--EEEEEEEEECC-SCCBTTBCEEEE
T ss_pred EEcCCCCEEEEEEECC---CCcCeEECCceEEEEeeCCcCCCcccCCCccEEEE--CCEEEEEEEeC-CCCCCCCceEEe
Confidence 8999999999999998 4799999999999999999865 4667899999 99999999998 4555 7777
Q ss_pred EEee
Q 011178 229 ISTR 232 (491)
Q Consensus 229 ~~~~ 232 (491)
++..
T Consensus 423 CHil 426 (451)
T 2uxt_A 423 SQTL 426 (451)
T ss_dssp ESSH
T ss_pred CCch
Confidence 7654
No 57
>1v10_A Laccase; multicopper blue oxidase, oxidase; 1.7A {Rigidoporus lignosus} SCOP: b.6.1.3 b.6.1.3 b.6.1.3
Probab=99.12 E-value=1.1e-09 Score=115.45 Aligned_cols=238 Identities=12% Similarity=0.106 Sum_probs=148.3
Q ss_pred CceEEEcCcCCCcceEEEeCCCEEEEEEEEcCCC----CeEeEEEeCceeE-EEEecCccCCCCccCeEEEcCCceEEEE
Q 011178 141 PDGLVINGRGSNANTFTVDQGKTYRFRISNVGIS----TSINFRIQGHKML-LVEVEGTHTLQNTYDSLDIHLGQSYSVL 215 (491)
Q Consensus 141 ~~~~~vNG~~~~~~~~~v~~g~~~rlR~iN~~~~----~~~~~~i~~~~~~-via~DG~~~~p~~~~~l~l~pGeR~dv~ 215 (491)
-..+++||+.. .|+|+++.|+++++++.|.... ....+|.+|.... --..||.+- +..-.|.||++++..
T Consensus 43 ~~~~~~NG~~P-GP~i~~~~Gd~v~v~v~N~l~~~~~~~~tsiHwHGl~~~~~~~~DGv~~----vtq~~I~PG~s~~Y~ 117 (521)
T 1v10_A 43 RSAVTAEGTTI-APLITGNIDDRFQINVIDQLTDANMRRATSIHWHGFFQAGTTEMDGPAF----VNQCPIIPNESFVYD 117 (521)
T ss_dssp EEEEEESSSSS-CCCEEEETTCEEEEEEEECCCCTTSCCCBCEEEETCCCTTCGGGSCCBT----TTBCCBCTTEEEEEE
T ss_pred EEEEEECCccC-CCcEEEeCCCEEEEEEEECCCCccCCCCceEecCCeeccCCCccCCCcc----eeeCCcCCCCeEEEE
Confidence 35789999864 7999999999999999999872 5778888886542 123577642 233458899999999
Q ss_pred EEeCCCCcceEEEEEeeccCCC-cceEEEEEecCCCCCCCCCCCCCCCccccchhhhhhhh--ccCCCCCCCCCCCCCCC
Q 011178 216 VRADQPPQGYYIVISTRFTSQV-LSATSVLHYSNSAGSVSGPPPGGPTTQIDWSLEQARSL--RRNLTASGPRPNPQGSY 292 (491)
Q Consensus 216 v~~~~~~g~~~i~~~~~~~~~~-~~~~ail~y~~~~~~~~~~~p~~p~~~~~~~~~~~~~~--~~~l~~~~~~~~p~~~~ 292 (491)
+++.+.+|+||...+.. .+. ....|.|.+.+... +.+. + .+.+ .....-+ +|..... +
T Consensus 118 f~~~~~~GT~wYH~H~~--~q~~~Gl~G~liV~~~~~----~~~~-~-~~~d--~~e~~l~l~D~~~~~~-------~-- 178 (521)
T 1v10_A 118 FVVPGQAGTYWYHSHLS--TQYCDGLRGAFVVYDPND----PHLS-L-YDVD--DASTVITIADWYHSLS-------T-- 178 (521)
T ss_dssp EECTTCCEEEEEEECST--TGGGGTCEEEEEEECTTC----TTGG-G-CSBC--SGGGEEEEEEECSSCC-------C--
T ss_pred EecCCCCccEEEEeccC--CchhcCceEEEEEcCCcc----cccc-c-CCCC--CceeEEEEcccccCCH-------H--
Confidence 99655689999988763 232 23344444433211 1100 0 0110 0000000 1111100 0
Q ss_pred CccccccceEEEEeccccCcCCeEeEEEcCeeeeCCCCccccccccCCCCccccCCCCCCCCCCCcceeeeEEeecCCcE
Q 011178 293 HYGLINTTHTIRLQNTAPTINGKQRYAVNSVSFIPADTPLKLADYFKIPGVFSVGSIPDNPTGGGAYLQTSVMAADFRGF 372 (491)
Q Consensus 293 ~~~~~~~~~~~~l~~~~~~~~~~~~~~iNg~~f~~~~~p~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~g~~ 372 (491)
.+...... .........|||+.+.....+. .....++++.|++
T Consensus 179 ---------~~~~~~~~-~~~~~d~~liNG~~~~~~~~~~---------------------------~~~~~~~v~~G~~ 221 (521)
T 1v10_A 179 ---------VLFPNPNK-APPAPDTTLINGLGRNSANPSA---------------------------GQLAVVSVQSGKR 221 (521)
T ss_dssp ----------------C-CCSCCSEEEETTBCCCSSCGGG---------------------------SCCCEEEECTTCE
T ss_pred ---------HHhhccCC-CCCCCCEEEECCcccCCCCCCC---------------------------CCceEEEECCCCE
Confidence 00000000 0001124678887542100000 0124578899999
Q ss_pred EEEEEEcCCCC-CCceeccCCCeEEEeeccCCCCCCCCCCcccCCCCceeeEEeCCCCEEEEEEEccC-cceeeeeecch
Q 011178 373 AEVVFENPEDT-LQSWHIDGHNFFAVGMDGGEWTPASRLTYNLRDTISRCTVQVYPKSWTAVYVPLDN-VGMWNIRSENW 450 (491)
Q Consensus 373 v~~~i~N~~~~-~HP~HlHG~~F~Vl~~g~g~~~~~~~~~~~~~~p~~rDTv~v~p~~~~~irf~adn-pG~w~~HCHil 450 (491)
++|+|.|.+.. .|.|||+||.|.|++..++. ..|...|++.|.+|+.+.|.++++. +|.|.++|+..
T Consensus 222 ~RlRliNa~~~~~~~~~i~gh~~~vi~~DG~~-----------~~p~~~~~l~l~pgqR~dvlv~~~~~~g~y~i~~~~~ 290 (521)
T 1v10_A 222 YRFRIVSTSCFPNYAFSIDGHRMTVIEVDGVS-----------HQPLTVDSLTIFAGQRYSVVVEANQAVGNYWIRANPS 290 (521)
T ss_dssp EEEEEEECCSSCCEEEEETTCCEEEEEETTEE-----------EEEEEESBEEECTTCEEEEEEECCSCSSEEEEEEEES
T ss_pred EEEEEEecCCcccEEEEECCCeEEEEecCCcc-----------ccceeeeeEEEcccceEEEEEEcCCCCCceeeeeccc
Confidence 99999999865 58999999999999996431 1356789999999999999999976 69999999864
No 58
>1aoz_A Ascorbate oxidase; oxidoreductase(oxygen acceptor); HET: NAG; 1.90A {Cucurbita pepo var} SCOP: b.6.1.3 b.6.1.3 b.6.1.3 PDB: 1aso_A* 1asp_A* 1asq_A*
Probab=99.10 E-value=1.5e-09 Score=115.13 Aligned_cols=253 Identities=14% Similarity=0.141 Sum_probs=150.8
Q ss_pred CceEEEcCcCCCcceEEEeCCCEEEEEEEEcCCCCeEeEEEeCceeEEE-EecCccCCCCccCeEEEcCCceEEEEEEeC
Q 011178 141 PDGLVINGRGSNANTFTVDQGKTYRFRISNVGISTSINFRIQGHKMLLV-EVEGTHTLQNTYDSLDIHLGQSYSVLVRAD 219 (491)
Q Consensus 141 ~~~~~vNG~~~~~~~~~v~~g~~~rlR~iN~~~~~~~~~~i~~~~~~vi-a~DG~~~~p~~~~~l~l~pGeR~dv~v~~~ 219 (491)
-..+++||+.. .|+|+++.|+++++++.|........+|.+|....-- ..||.+- +..-.|.||+++...++++
T Consensus 22 ~~~~~~Ng~~P-GP~I~~~~GD~v~v~v~N~l~~~~tsiHwHGl~~~~~~~~DGv~~----vtq~~I~PG~s~tY~f~~~ 96 (552)
T 1aoz_A 22 NIVMGINGQFP-GPTIRANAGDSVVVELTNKLHTEGVVIHWHGILQRGTPWADGTAS----ISQCAINPGETFFYNFTVD 96 (552)
T ss_dssp EEEEEETTBSS-CCCEEEETTCEEEEEEEECCSSCCBCEEEETCCCTTCGGGSCCBT----TTBCCBCTTCEEEEEEECC
T ss_pred EEEEEECCccC-CCcEEEeCCCEEEEEEEeCCCCCCeeEEeCCCccCCCcccCCCcc----cccCCcCCCCeEEEEEECC
Confidence 35799999864 7999999999999999999875577888888643211 1588653 2345689999999999996
Q ss_pred CCCcceEEEEEeeccCCC-cceEEEEEecCCCCCCCCCCCCCCCccc-----cchhhhhhhhccCCCCCCCCCCCCCCCC
Q 011178 220 QPPQGYYIVISTRFTSQV-LSATSVLHYSNSAGSVSGPPPGGPTTQI-----DWSLEQARSLRRNLTASGPRPNPQGSYH 293 (491)
Q Consensus 220 ~~~g~~~i~~~~~~~~~~-~~~~ail~y~~~~~~~~~~~p~~p~~~~-----~~~~~~~~~~~~~l~~~~~~~~p~~~~~ 293 (491)
.+|+||...+.. .+. ....|.|....... ...+.+.. .+. ||.......+...+... +.
T Consensus 97 -~~GT~wYHsH~~--~q~~~Gl~G~liV~~~~~-~~~~~~~d--~e~~l~l~Dw~~~~~~~~~~~~~~~-----~~---- 161 (552)
T 1aoz_A 97 -NPGTFFYHGHLG--MQRSAGLYGSLIVDPPQG-KKEPFHYD--GEINLLLSDWWHQSIHKQEVGLSSK-----PI---- 161 (552)
T ss_dssp -SCEEEEEEECST--TTGGGTCEEEEEEECCTT-CCCSSCCS--EEEEEEEEEECSSCHHHHHHHTTSS-----SC----
T ss_pred -CCEEEEEEECch--hHHhccCeeeEEEeCCcc-cCCCCCCC--ccceEEeecccCCCHHHHHhhhhcc-----cc----
Confidence 689999988753 232 22344444443321 11111110 111 11111000000000000 00
Q ss_pred ccccccceEEEEeccccCcCCeEeEEEcCeeeeCCCCccccccccCCCCccccCCCCCCCCCCCcceeeeEEeecCCcEE
Q 011178 294 YGLINTTHTIRLQNTAPTINGKQRYAVNSVSFIPADTPLKLADYFKIPGVFSVGSIPDNPTGGGAYLQTSVMAADFRGFA 373 (491)
Q Consensus 294 ~~~~~~~~~~~l~~~~~~~~~~~~~~iNg~~f~~~~~p~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~g~~v 373 (491)
. .........|||+.... ..... .+. .....+. .. +........+.++.|+++
T Consensus 162 ------------~----~~~~~~~~liNG~~~~~--c~~~~-~~~-~~~~~c~------~~-~~~~~~~~~~~v~~G~~~ 214 (552)
T 1aoz_A 162 ------------R----WIGEPQTILLNGRGQFD--CSIAA-KYD-SNLEPCK------LK-GSESCAPYIFHVSPKKTY 214 (552)
T ss_dssp ------------C----CCCSCSEEEETTBCCSS--SBTTG-GGC-TTSCBCC------CC-SCSTTSCCCEEECTTCEE
T ss_pred ------------c----CCCCCCeEEECCccccC--cccCc-ccc-ccccccc------cc-CCCCCCceEEEEcCCCEE
Confidence 0 00011245788876321 00000 000 0000000 00 000001125789999999
Q ss_pred EEEEEcCCCC-CCceeccCCCeEEEeeccCCCCCCCCCCcccCCCCceeeEEeCCCCEEEEEEEccC--cceeeeeecch
Q 011178 374 EVVFENPEDT-LQSWHIDGHNFFAVGMDGGEWTPASRLTYNLRDTISRCTVQVYPKSWTAVYVPLDN--VGMWNIRSENW 450 (491)
Q Consensus 374 ~~~i~N~~~~-~HP~HlHG~~F~Vl~~g~g~~~~~~~~~~~~~~p~~rDTv~v~p~~~~~irf~adn--pG~w~~HCHil 450 (491)
+|+|.|.+.. .+-|||+||.|.|++..++. ..|...|++.|.+|+.+.|.+++++ +|.|.++|+..
T Consensus 215 RlRliNa~~~~~~~~~i~gh~~~vi~~DG~~-----------~~P~~~~~l~i~pgqR~dvlv~~~~~~~g~y~i~~~~~ 283 (552)
T 1aoz_A 215 RIRIASTTALAALNFAIGNHQLLVVEADGNY-----------VQPFYTSDIDIYSGESYSVLITTDQNPSENYWVSVGTR 283 (552)
T ss_dssp EEEEEECCSSCEEEEEETTCCEEEEEETTEE-----------EEEEEESCEEECTTCEEEEEEECCSCTTCCEEEEEEEE
T ss_pred EEEEEcccccceEEEEEcCcEEEEEEECCcc-----------cCceEEeEEEEcCCcEEEEEEEcCCCCCCCEEEEEEcc
Confidence 9999999865 48999999999999996421 1356789999999999999999943 79999999986
Q ss_pred h
Q 011178 451 A 451 (491)
Q Consensus 451 ~ 451 (491)
.
T Consensus 284 ~ 284 (552)
T 1aoz_A 284 A 284 (552)
T ss_dssp S
T ss_pred c
Confidence 4
No 59
>1hfu_A Laccase 1; oxidoreductase, blue multi-copper oxidase, type-2 copper depleted, signal, glycoprotein; HET: MAN NAG NDG; 1.68A {Coprinus cinereus} SCOP: b.6.1.3 b.6.1.3 b.6.1.3 PDB: 1a65_A*
Probab=99.07 E-value=3.3e-09 Score=111.30 Aligned_cols=217 Identities=12% Similarity=0.121 Sum_probs=137.0
Q ss_pred CeEEE--eeeEEEEEEecCCC-CCeeeecccCCCCCCCCCCCCC-----CCCCCCCCCeEEEEEEeCCCccceeEeCCcc
Q 011178 12 CSLIT--HLYTHLVVLNFIYM-APLITLNGVQQRRNSWQDGVYG-----TNCPIPPGKNFTYVLQVKDQIGSYFYFPSLA 83 (491)
Q Consensus 12 ~~l~v--~d~v~i~~~N~l~~-~~siH~HG~~~~~~~~~DG~~~-----~q~~i~PG~~~~Y~f~~~~~~Gt~wYH~H~~ 83 (491)
++++| |+++++||.|.... ...+|++|..... -..||.+. ....|.||++++..+++.+.+|+||.+++..
T Consensus 185 ~~~~v~~g~~~RlRliN~~~~~~~~~~i~gh~~~v-i~~DG~~~~p~~~~~l~l~pgeR~dvlv~~~~~~g~y~i~a~~~ 263 (503)
T 1hfu_A 185 SIVNVEQGKKYRMRLISLSCDPNWQFSIDGHELTI-IEVDGELTEPHTVDRLQIFTGQRYSFVLDANQPVDNYWIRAQPN 263 (503)
T ss_dssp CEEEECTTCEEEEEEEECCSSCCEEEEETTCCEEE-EEETTEEEEEEEESBEEECTTCEEEEEEECCSCSSEEEEEEEES
T ss_pred eEEEEcCCCEEEEEEEecCCcccEEEEEcCceEEE-EeccCccccccccCeEEEcccceEEEEEEcCCCccceeeeeccc
Confidence 66766 36789999999764 5678888875432 13788742 2345899999999999975579999999853
Q ss_pred c--c-----ccCCceeEEEEecCCCCCCCCCCCCCcceEEeeecccCCH--HHHHH---------HHhcCCCCCCCceEE
Q 011178 84 F--H-----KAAGGYGGIKIASRPLIPVPFDPPAGDFTILAGDWYKKNH--TDLKA---------ILDSGSDLPFPDGLV 145 (491)
Q Consensus 84 ~--q-----~~~Gl~G~liV~~~~~~~~~~~~~~~e~~l~l~d~~~~~~--~~~~~---------~~~~~~~~~~~~~~~ 145 (491)
. + ...|+..+++.........+......+. ..+.+...... ..... .+.-.. ...+..++
T Consensus 264 ~~~~~~~~~~~~~~~~ail~y~~~~~~~p~~~~~~~~-~~l~~~~l~p~~~~~~p~~~~~~~~~~~~~l~~-~~~~~~~~ 341 (503)
T 1hfu_A 264 KGRNGLAGTFANGVNSAILRYAGAANADPTTSANPNP-AQLNEADLHALIDPAAPGIPTPGAADVNLRFQL-GFSGGRFT 341 (503)
T ss_dssp SCGGGGGGCCGGGTTEEEEEETTSCSSCCCCCCCSSC-CBCCGGGCBBSSSCSCSSCSSTTCSSEEEECCE-EEETTEEE
T ss_pred cCCcccccccCCCceEEEEEECCCCCCCCCCCCCCcc-CCCccccccccCccCCCCcccCCcceEEEEEEe-eccCceEE
Confidence 1 1 2344544555443221111110000000 00001000000 00000 000000 00012578
Q ss_pred EcCcCCCc-----------------------ceEEEeCCCEEEEEEEEcCCCCeEeEEEeCceeEEEEecCcc----CCC
Q 011178 146 INGRGSNA-----------------------NTFTVDQGKTYRFRISNVGISTSINFRIQGHKMLLVEVEGTH----TLQ 198 (491)
Q Consensus 146 vNG~~~~~-----------------------~~~~v~~g~~~rlR~iN~~~~~~~~~~i~~~~~~via~DG~~----~~p 198 (491)
|||+.+.. ..+.++.|++|+++++|......+.|||+||.|+|++.+|.. ..|
T Consensus 342 iNg~~~~~~~~P~l~~~~~g~~~~~~~~~~~~~~~v~~g~~vei~l~~n~~~~~HP~HLHGh~F~Vl~~~~~~~~n~~~p 421 (503)
T 1hfu_A 342 INGTAYESPSVPTLLQIMSGAQSANDLLPAGSVYELPRNQVVELVVPAGVLGGPHPFHLHGHAFSVVRSAGSSTYNFVNP 421 (503)
T ss_dssp ETTBCCCCCSSCHHHHHHTTCCSGGGSSSTTSEEEECSSCEEEEEEECCSTTCCCEEEETTCCEEEEECTTCCCCCCSSB
T ss_pred ECCCccCCCCCcchhhhhcCCcccccCCCCceEEEccCCCEEEEEEECCCCCCCCCEEEecceEEEEecCCCCccccCCC
Confidence 99988521 357899999999999964445689999999999999999875 257
Q ss_pred CccCeEEE-cCCceEEEEEEeCCCCcceEEEEEee
Q 011178 199 NTYDSLDI-HLGQSYSVLVRADQPPQGYYIVISTR 232 (491)
Q Consensus 199 ~~~~~l~l-~pGeR~dv~v~~~~~~g~~~i~~~~~ 232 (491)
...|++.| .||+++.|.++++ .||.|.+.++..
T Consensus 422 ~~rDTV~V~ppg~~v~irf~ad-nPG~W~~HCHil 455 (503)
T 1hfu_A 422 VKRDVVSLGVTGDEVTIRFVTD-NPGPWFFHCHIE 455 (503)
T ss_dssp CEESEEECCSTTCEEEEEEECC-SCEEEEEEESSH
T ss_pred CeeeeEEecCCCceEEEEEEcC-CCeeeeEecCch
Confidence 77899999 7999999999998 789888888754
No 60
>3pxl_A Laccase; 4-copper protein, metal-binding, oxidoreductase, type-2 Cu-D; HET: NAG BMA MAN; 1.20A {Trametes hirsuta} PDB: 3fpx_A* 3v9c_A* 3div_A* 2h5u_A* 2xyb_A* 1kya_A* 1gyc_A* 2qt6_A* 2hrg_A* 2hrh_A* 4a2f_A* 2vdz_A* 4a2d_A* 4a2e_A* 4a2g_A* 4a2h_A* 2ve0_A* 2vds_A* 2hzh_A* 3kw7_A*
Probab=99.06 E-value=6.5e-09 Score=108.53 Aligned_cols=231 Identities=13% Similarity=0.139 Sum_probs=146.4
Q ss_pred ceEEEcCcCCCcceEEEeCCCEEEEEEEEcCCC----CeEeEEEeCceeEE-EEecCccCCCCccCeEEEcCCceEEEEE
Q 011178 142 DGLVINGRGSNANTFTVDQGKTYRFRISNVGIS----TSINFRIQGHKMLL-VEVEGTHTLQNTYDSLDIHLGQSYSVLV 216 (491)
Q Consensus 142 ~~~~vNG~~~~~~~~~v~~g~~~rlR~iN~~~~----~~~~~~i~~~~~~v-ia~DG~~~~p~~~~~l~l~pGeR~dv~v 216 (491)
..+++||+.. .|+|+++.|+++++++.|.... ....+|.+|....- -..||.+- +.+-.|.||+++...+
T Consensus 23 ~~~~~NG~~P-GP~I~~~~GD~v~V~v~N~l~~~~~~~~tsiHwHGl~~~~~~~~DGv~~----vtq~pI~PG~s~tY~f 97 (499)
T 3pxl_A 23 QAVVVNGVTP-GPLVAGNIGDRFQLNVIDNLTNHTMLKSTSIHWHGFFQHGTNWADGPAF----INQCPISPGHSFLYDF 97 (499)
T ss_dssp EEEEETTBSS-CCCEEEETTCEEEEEEEECCCCGGGCSCBCEEEETCCCTTCGGGSCCBT----TTBCCBCTTCEEEEEE
T ss_pred EEEEECCccc-CCeEEEeCCCEEEEEEEECCCCccCCCceEEEeCCcccCCCccccCCCc----cccCCCCCCCeEEEEE
Confidence 4789999874 7999999999999999999864 35778888875421 34677542 2334689999999999
Q ss_pred EeCCCCcceEEEEEeeccCCC-cceEEEEEecCCCCCCCCCCCCCCCccccchhhhhhh--hccCCCCCCCCCCCCCCCC
Q 011178 217 RADQPPQGYYIVISTRFTSQV-LSATSVLHYSNSAGSVSGPPPGGPTTQIDWSLEQARS--LRRNLTASGPRPNPQGSYH 293 (491)
Q Consensus 217 ~~~~~~g~~~i~~~~~~~~~~-~~~~ail~y~~~~~~~~~~~p~~p~~~~~~~~~~~~~--~~~~l~~~~~~~~p~~~~~ 293 (491)
++++.+|+||...+.. .+. ....|.|.......+ .+. + .+.+ .....- -+|...... ..
T Consensus 98 ~~~~~~GT~wYHsH~~--~q~~~GL~G~lIV~~~~~~----~~~-~-~~~d--~~~~~l~l~Dw~~~~~~-----~~--- 159 (499)
T 3pxl_A 98 QVPDQAGTFWYHSHLS--TQYCDGLRGPFVVYDPNDP----HAS-R-YDVD--NDDTVITLADWYHTAAK-----LG--- 159 (499)
T ss_dssp ECSSCCEEEEEEECST--TGGGGTCEEEEEEECTTCT----TGG-G-CSBC--SGGGEEEEEEECSSCTT-----TS---
T ss_pred EcCCCCceeeeeccch--hHHhccceeEEEEcCCccc----ccc-c-CCCC--CceEEEEEEcccCCccc-----cc---
Confidence 9965689999988763 222 233444444322111 000 0 0111 000000 011111000 00
Q ss_pred ccccccceEEEEeccccCcCCeEeEEEcCeeeeCCCCccccccccCCCCccccCCCCCCCCCCCcceeeeEEeecCCcEE
Q 011178 294 YGLINTTHTIRLQNTAPTINGKQRYAVNSVSFIPADTPLKLADYFKIPGVFSVGSIPDNPTGGGAYLQTSVMAADFRGFA 373 (491)
Q Consensus 294 ~~~~~~~~~~~l~~~~~~~~~~~~~~iNg~~f~~~~~p~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~g~~v 373 (491)
.. .........|||+..... .+ . .....+.++.|+++
T Consensus 160 ------------~~---~p~~~d~~liNG~~~~~~-~~----------------------~-----~~~~~~~v~~G~~~ 196 (499)
T 3pxl_A 160 ------------PR---FPGGADATLINGKGRAPS-DS----------------------V-----AELSVIKVTKGKRY 196 (499)
T ss_dssp ------------CS---SCSSCSEEEETTBCCCTT-CT----------------------T-----CCCCEEEECTTCEE
T ss_pred ------------cC---CCCCCcEEEECCCCcCCC-CC----------------------C-----CCcceEEEcCCCEE
Confidence 00 000113467787632110 00 0 01245788999999
Q ss_pred EEEEEcCCCC-CCceeccCCCeEEEeeccCCCCCCCCCCcccCCCCceeeEEeCCCCEEEEEEEccCc-ceeeeeecc
Q 011178 374 EVVFENPEDT-LQSWHIDGHNFFAVGMDGGEWTPASRLTYNLRDTISRCTVQVYPKSWTAVYVPLDNV-GMWNIRSEN 449 (491)
Q Consensus 374 ~~~i~N~~~~-~HP~HlHG~~F~Vl~~g~g~~~~~~~~~~~~~~p~~rDTv~v~p~~~~~irf~adnp-G~w~~HCHi 449 (491)
+|+|.|.+.. .+-|||+||.|+|++..+ . +..|...|++.|.+|+.+.|.++++.+ |.|.+.|..
T Consensus 197 RlRliNa~~~~~~~~~i~gh~~~via~DG-~----------~~~P~~~~~l~i~pGqR~dvlv~~~~~~g~y~i~a~~ 263 (499)
T 3pxl_A 197 RFRLVSLSCNPNHTFSIDGHNLTIIEVDS-V----------NSQPLEVDSIQIFAAQRYSFVLDANQAVDNYWIRANP 263 (499)
T ss_dssp EEEEEECCSSCCEEEEETTBCEEEEEETT-E----------EEEEEEESBEEECTTCEEEEEEECCSCSSEEEEEEEE
T ss_pred EEEEEecCCCeeEEEEECCCeEEEEEECC-c----------ccCceEeeeEEECCCcEEEEEEECCCCCceEEEEEec
Confidence 9999998864 489999999999999953 2 223567899999999999999999765 899899864
No 61
>3t6v_A Laccase; beta barrel, oxidoreductase; HET: CBS; 2.00A {Steccherinum ochraceum} PDB: 3t6w_A* 3t6x_A* 3t6z_A* 3t71_A*
Probab=99.05 E-value=6.6e-09 Score=108.44 Aligned_cols=233 Identities=11% Similarity=0.080 Sum_probs=146.4
Q ss_pred ceEEEcCcCCCcceEEEeCCCEEEEEEEEcCCC----CeEeEEEeCceeEE-EEecCccCCCCccCeEEEcCCceEEEEE
Q 011178 142 DGLVINGRGSNANTFTVDQGKTYRFRISNVGIS----TSINFRIQGHKMLL-VEVEGTHTLQNTYDSLDIHLGQSYSVLV 216 (491)
Q Consensus 142 ~~~~vNG~~~~~~~~~v~~g~~~rlR~iN~~~~----~~~~~~i~~~~~~v-ia~DG~~~~p~~~~~l~l~pGeR~dv~v 216 (491)
..++|||+.. .|+|+++.|+++++++.|.... ....+|.+|....- -..||.+- +..-.|.||+.+...+
T Consensus 24 ~~~~~NG~~P-GP~I~~~~GD~v~v~v~N~l~~~~~~~~tsiHwHGl~~~~~~~~DGv~~----vtq~pI~PG~sftY~f 98 (495)
T 3t6v_A 24 PAVNAGGTFP-GPVIAGNVGDNFQIVTFNQLIECSMLVDTSIHWHGEFQKGTNWADGPAF----ITQCPIIVGNSFSYNF 98 (495)
T ss_dssp EEEEETTSSS-CCEEEEETTCEEEEEEEECCCCGGGCSCBCEEEETCCCTTCGGGSCCBT----TTBCCBCTTCEEEEEE
T ss_pred EEEEECCccc-CCeEEEECCcEEEEEEEECCCCccCCCceEEEeCCcccCCCccccCCCc----cccCCCCCCCeEEEEE
Confidence 5789999874 7999999999999999999864 35778888865421 24688642 2344689999999999
Q ss_pred EeCCCCcceEEEEEeeccCCC-cceEEEEEecCCCCCCCCCCCCCCCccccchhhhhhh--hccCCCCCCCCCCCCCCCC
Q 011178 217 RADQPPQGYYIVISTRFTSQV-LSATSVLHYSNSAGSVSGPPPGGPTTQIDWSLEQARS--LRRNLTASGPRPNPQGSYH 293 (491)
Q Consensus 217 ~~~~~~g~~~i~~~~~~~~~~-~~~~ail~y~~~~~~~~~~~p~~p~~~~~~~~~~~~~--~~~~l~~~~~~~~p~~~~~ 293 (491)
++++.+|+||...+.. .+. ....|.|.......+ .+.. .+.+ .....- -+|.......
T Consensus 99 ~~~~~~GT~wYHsH~~--~q~~~GL~G~lIV~~~~~~----~~~~--~~~d--~~e~~l~l~Dw~~~~~~~--------- 159 (495)
T 3t6v_A 99 NVPGMAGTYWYHSHLT--TQYCDGLRGPFVVYDPNDP----DANL--YDVD--DDTTIITLADWYHVLAKE--------- 159 (495)
T ss_dssp ECTTCCEEEEEEECST--TGGGGTCEEEEEEECTTCT----TGGG--CSBC--SGGGEEEEEEECSSCGGG---------
T ss_pred EeCCCCceeeeeccch--hHHhcCceEEEEEcCcccc----cccc--CCCC--CceeEEEEecccCCchhh---------
Confidence 9965689999988763 222 233444444322111 0000 0110 000000 0111100000
Q ss_pred ccccccceEEEEeccccCcCCeEeEEEcCeeeeCCCCccccccccCCCCccccCCCCCCCCCCCcceeeeEEeecCCcEE
Q 011178 294 YGLINTTHTIRLQNTAPTINGKQRYAVNSVSFIPADTPLKLADYFKIPGVFSVGSIPDNPTGGGAYLQTSVMAADFRGFA 373 (491)
Q Consensus 294 ~~~~~~~~~~~l~~~~~~~~~~~~~~iNg~~f~~~~~p~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~g~~v 373 (491)
+.. ..........|||+..... . |. ......++++.|+++
T Consensus 160 -----------~~~--~~p~~~d~~liNG~g~~~~-~----------------------~~----~~~~~~~~v~~G~~~ 199 (495)
T 3t6v_A 160 -----------MGA--GGAITADSTLIDGLGRTHV-N----------------------VA----AVPLSVITVEVGKRY 199 (495)
T ss_dssp -----------SCS--SSCCCCSEEEETTBCCBSS-S----------------------CC----CCCCCEEEECTTCEE
T ss_pred -----------hcc--CCCCCCcEEEECCcCcCCC-C----------------------cc----cCCceEEEEcCCCEE
Confidence 000 0000112467787632110 0 00 001245788999999
Q ss_pred EEEEEcCCCC-CCceeccCCCeEEEeeccCCCCCCCCCCcccCCCCceeeEEeCCCCEEEEEEEccCc-ceeeeeecc
Q 011178 374 EVVFENPEDT-LQSWHIDGHNFFAVGMDGGEWTPASRLTYNLRDTISRCTVQVYPKSWTAVYVPLDNV-GMWNIRSEN 449 (491)
Q Consensus 374 ~~~i~N~~~~-~HP~HlHG~~F~Vl~~g~g~~~~~~~~~~~~~~p~~rDTv~v~p~~~~~irf~adnp-G~w~~HCHi 449 (491)
+|+|.|.+.. .+.|||+||.|+|++..+ . +..|...|++.|.+|+.+.|.++++.+ |.|.++|..
T Consensus 200 RlRliN~~~~~~~~~~i~gh~~~via~DG-~----------~~~P~~~~~l~i~pGqR~dvlv~~~~~~g~y~i~a~~ 266 (495)
T 3t6v_A 200 RMRLVSISCDPNYDFSIDGHDMTIIETDG-V----------DSQELTVDEIQIFAAQRYSFVLNANQPVGNYWIRANP 266 (495)
T ss_dssp EEEEEECCSSCCEEEEETTCCEEEEEETT-E----------EEEEEEESBEEECTTCEEEEEEECCSCSSEEEEEEEE
T ss_pred EEEEEecCCCeeEEEEECCCeEEEEEeCC-c----------ccCCEEeeeEEEcCceEEEEEEECCCCCceEEEEEec
Confidence 9999998754 489999999999999953 2 223567899999999999999999765 999999875
No 62
>2ov0_A Amicyanin; beta-sandwich, electron transport; 0.75A {Paracoccus denitrificans} SCOP: b.6.1.1 PDB: 1aaj_A 1aan_A 1aac_A 1mg2_C* 1mg3_C* 1t5k_A 2gc4_C* 2gc7_C* 2j55_A* 2j56_A* 2j57_A* 2mta_A* 1bxa_A 2rac_A 3l45_A 3ie9_A 3iea_A 2idq_A 2ids_A 1sf3_A ...
Probab=99.02 E-value=5.8e-10 Score=91.41 Aligned_cols=71 Identities=11% Similarity=0.005 Sum_probs=53.6
Q ss_pred CCeEEE--eeeEEEEEEecCCCCCeeeecccCCCCCCCCCCCCC-CCCCCCCCCeEEEEEEeCCCccceeEeCCcccccc
Q 011178 11 GCSLIT--HLYTHLVVLNFIYMAPLITLNGVQQRRNSWQDGVYG-TNCPIPPGKNFTYVLQVKDQIGSYFYFPSLAFHKA 87 (491)
Q Consensus 11 G~~l~v--~d~v~i~~~N~l~~~~siH~HG~~~~~~~~~DG~~~-~q~~i~PG~~~~Y~f~~~~~~Gt~wYH~H~~~q~~ 87 (491)
.++|+| ||+| +++|..+.++++|+++. +||... .+..+.||++++|.| +++|+|||||+.+.
T Consensus 32 P~~i~v~~Gd~V--~~~N~d~~~H~v~~~~~-------~~g~~~~~~~~~~pG~~~~~tf---~~~G~y~y~C~~H~--- 96 (105)
T 2ov0_A 32 TPELHVKVGDTV--TWINREAMPHNVHFVAG-------VLGEAALKGPMMKKEQAYSLTF---TEAGTYDYHCTPHP--- 96 (105)
T ss_dssp SSEEEECTTCEE--EEEECSSSCBCCEECTT-------TSSSSCEECCCBCTTEEEEEEE---CSCEEEEEECSSCT---
T ss_pred CCEEEECCCCEE--EEEECCCCCEEEEEcCC-------CCCcccccccccCCCCEEEEEe---CCCEEEEEEeCCCC---
Confidence 345555 3543 45699888899999852 356654 456689999999988 47999999999863
Q ss_pred CCceeEEEEe
Q 011178 88 AGGYGGIKIA 97 (491)
Q Consensus 88 ~Gl~G~liV~ 97 (491)
||.|.|+|+
T Consensus 97 -gM~G~i~V~ 105 (105)
T 2ov0_A 97 -FMRGKVVVE 105 (105)
T ss_dssp -TCEEEEEEC
T ss_pred -CCEEEEEEC
Confidence 999999985
No 63
>3cg8_A Laccase; oxidoreductase, multicopper blue protein; HET: PG4; 2.68A {Streptomyces coelicolor}
Probab=99.00 E-value=4.6e-10 Score=111.86 Aligned_cols=90 Identities=14% Similarity=0.182 Sum_probs=69.9
Q ss_pred CCeEEE--eeeEEEEEEecCCCCCeeeecccCCCCCCCCCCCC-------C--CCCCCCCCCeEEEEEEe--CCCcccee
Q 011178 11 GCSLIT--HLYTHLVVLNFIYMAPLITLNGVQQRRNSWQDGVY-------G--TNCPIPPGKNFTYVLQV--KDQIGSYF 77 (491)
Q Consensus 11 G~~l~v--~d~v~i~~~N~l~~~~siH~HG~~~~~~~~~DG~~-------~--~q~~i~PG~~~~Y~f~~--~~~~Gt~w 77 (491)
++++++ |++|+|+|.|.....+.+|+||...... .+|.. . ....|.||++++|.|++ .+.+|+|+
T Consensus 208 ~~~l~v~~Ge~vri~l~N~g~~~HpfHlHGh~f~v~--~~G~~~~p~~~~~~~Dtv~v~PG~~~~v~~~~~~~~~pG~w~ 285 (343)
T 3cg8_A 208 GPDFEATVGDRVEIVMITHGEYYHTFHMHGHRWADN--RTGILTGPDDPSRVIDNKITGPADSFGFQIIAGEGVGAGAWM 285 (343)
T ss_dssp CCCEEEETTCEEEEEEEEESSCCEEEEETTCCEESS--SSSSCCSTTCCCCEESEEEECTTCEEEEEEETTTTTCSEEEE
T ss_pred CccEEeCCCCEEEEEEEcCCccccccEecCcEEEEe--ccCcccCCCCcccceeeEEeCCCCEEEEEEEECCCCCCeeEE
Confidence 344444 5788999999998999999999863221 23321 1 22459999999999996 25799999
Q ss_pred EeCCccccccCCceeEEEEecCCCC
Q 011178 78 YFPSLAFHKAAGGYGGIKIASRPLI 102 (491)
Q Consensus 78 YH~H~~~q~~~Gl~G~liV~~~~~~ 102 (491)
||||...+...||.|.|+|.+++..
T Consensus 286 ~HCHi~~H~~~GM~g~~~V~~~~~~ 310 (343)
T 3cg8_A 286 YHCHVQSHSDMGMVGLFLVKKPDGT 310 (343)
T ss_dssp EEECSHHHHHTTCEEEEEEECTTSC
T ss_pred EeCCCHHHHhccCcEEEEEecCCCC
Confidence 9999999999999999999986643
No 64
>2gim_A Plastocyanin; beta sheet, Cu, helix, electron transport; 1.60A {Anabaena variabilis} SCOP: b.6.1.1 PDB: 1fa4_A 1nin_A 1tu2_A* 2cj3_A
Probab=98.94 E-value=2.4e-09 Score=87.74 Aligned_cols=84 Identities=14% Similarity=0.078 Sum_probs=63.6
Q ss_pred EEeecCCcEEEEEEEcCCCCCCceeccCCCeEEEeeccCCCCCCCCCCcccCCCCceeeEEeCCCCEEEEEEEc-cCcce
Q 011178 364 VMAADFRGFAEVVFENPEDTLQSWHIDGHNFFAVGMDGGEWTPASRLTYNLRDTISRCTVQVYPKSWTAVYVPL-DNVGM 442 (491)
Q Consensus 364 ~~~~~~g~~v~~~i~N~~~~~HP~HlHG~~F~Vl~~g~g~~~~~~~~~~~~~~p~~rDTv~v~p~~~~~irf~a-dnpG~ 442 (491)
.+.++.|++|.|+ |.+...|.||+|+..+.. . .|. .. ....+|++.+.||+...+.|.+ +.||.
T Consensus 21 ~i~v~~Gd~V~~~--n~~~~~H~~~~~~~~~~~--~-~g~----~~------~~~~~~~~~~~pG~~~~~~f~~~~~~G~ 85 (106)
T 2gim_A 21 KLTIKPGDTVEFL--NNKVPPHNVVFDAALNPA--K-SAD----LA------KSLSHKQLLMSPGQSTSTTFPADAPAGE 85 (106)
T ss_dssp EEEECTTCEEEEE--ECSSSCCCBEECSSSSTT--C-CHH----HH------HHHCBCSCCCSTTCEEEEECCTTCCSEE
T ss_pred EEEECCCCEEEEE--ECCCCCceEEEeCCCCcc--c-ccc----cc------hhccccceeeCCCCEEEEEEecCCCCce
Confidence 4688999999886 777678999999765411 0 010 00 0011477889999999999988 89999
Q ss_pred eeeeecchhhhhcceEEEEEEe
Q 011178 443 WNIRSENWARQYLGQQFYLRVY 464 (491)
Q Consensus 443 w~~HCHil~H~d~GMm~~~~V~ 464 (491)
|.|||| .|.++||+..+.|.
T Consensus 86 y~y~C~--~H~~~GM~G~i~V~ 105 (106)
T 2gim_A 86 YTFYCE--PHRGAGMVGKITVA 105 (106)
T ss_dssp EEEECT--TTGGGTCEEEEEEC
T ss_pred EEEEeC--ChhhcCcEEEEEEc
Confidence 999999 79999999999885
No 65
>2gim_A Plastocyanin; beta sheet, Cu, helix, electron transport; 1.60A {Anabaena variabilis} SCOP: b.6.1.1 PDB: 1fa4_A 1nin_A 1tu2_A* 2cj3_A
Probab=98.91 E-value=1.6e-09 Score=88.85 Aligned_cols=71 Identities=17% Similarity=0.261 Sum_probs=52.1
Q ss_pred EEEecCCCCCeeeecccCCCCCCCCCCC-----CCCCCCCCCCCeEEEEEEeCCCccceeEeCCccccccCCceeEEEEe
Q 011178 23 VVLNFIYMAPLITLNGVQQRRNSWQDGV-----YGTNCPIPPGKNFTYVLQVKDQIGSYFYFPSLAFHKAAGGYGGIKIA 97 (491)
Q Consensus 23 ~~~N~l~~~~siH~HG~~~~~~~~~DG~-----~~~q~~i~PG~~~~Y~f~~~~~~Gt~wYH~H~~~q~~~Gl~G~liV~ 97 (491)
+++|....++++|+|+...+. .+|. ......+.||++++|.|++++++|+|||||| .+...||.|.|+|+
T Consensus 31 ~~~n~~~~~H~~~~~~~~~~~---~~g~~~~~~~~~~~~~~pG~~~~~~f~~~~~~G~y~y~C~--~H~~~GM~G~i~V~ 105 (106)
T 2gim_A 31 EFLNNKVPPHNVVFDAALNPA---KSADLAKSLSHKQLLMSPGQSTSTTFPADAPAGEYTFYCE--PHRGAGMVGKITVA 105 (106)
T ss_dssp EEEECSSSCCCBEECSSSSTT---CCHHHHHHHCBCSCCCSTTCEEEEECCTTCCSEEEEEECT--TTGGGTCEEEEEEC
T ss_pred EEEECCCCCceEEEeCCCCcc---cccccchhccccceeeCCCCEEEEEEecCCCCceEEEEeC--ChhhcCcEEEEEEc
Confidence 356886678899988764321 2332 0123458999999999987558999999999 55667999999997
Q ss_pred c
Q 011178 98 S 98 (491)
Q Consensus 98 ~ 98 (491)
+
T Consensus 106 ~ 106 (106)
T 2gim_A 106 G 106 (106)
T ss_dssp C
T ss_pred C
Confidence 4
No 66
>3sqr_A Laccase; multicopper oxidase, glycosylation, oxidoreductase; HET: NAG BMA MAN; 1.67A {Botrytis aclada}
Probab=98.91 E-value=1.8e-08 Score=106.56 Aligned_cols=239 Identities=12% Similarity=0.014 Sum_probs=146.3
Q ss_pred CceEEEcCcCCCcceEEEeCCCEEEEEEEEcCCCCeEeEEEeCceeE-EEEecCccCCCCccCeEEEcCCceEEEEEEeC
Q 011178 141 PDGLVINGRGSNANTFTVDQGKTYRFRISNVGISTSINFRIQGHKML-LVEVEGTHTLQNTYDSLDIHLGQSYSVLVRAD 219 (491)
Q Consensus 141 ~~~~~vNG~~~~~~~~~v~~g~~~rlR~iN~~~~~~~~~~i~~~~~~-via~DG~~~~p~~~~~l~l~pGeR~dv~v~~~ 219 (491)
-..+++||+.. .|+|+++.|+++++++.|........+|.+|.... --..||.+- +.+-.|.||+.+...++++
T Consensus 86 ~~~~~~NG~~P-GP~I~~~~GD~v~V~v~N~l~~~~tsIHwHGl~~~~t~~~DGvp~----vTq~pI~PG~sftY~f~~~ 160 (580)
T 3sqr_A 86 RSAMTFNGTVP-GPAIIADWGDNLIIHVTNNLEHNGTSIHWHGIRQLGSLEYDGVPG----VTQCPIAPGDTLTYKFQVT 160 (580)
T ss_dssp EEEEEETTBSS-CCCEEEETTCEEEEEEEECCSSCCBCEEETTCCCTTCGGGSCCBT----TTBCCBCTTCEEEEEEECC
T ss_pred EEEEEECCccC-CceEEEeCCCEEEEEEEECCCCCcceEEecccccCCCccccCCCc----cccCCCCCCCeEEEEEECC
Confidence 35799999964 79999999999999999998755677888776542 134688643 2344689999999999998
Q ss_pred CCCcceEEEEEeeccCCC-cceEEEEEecCCCCCCCCCCCC-C-CCccccchhhhhhhhccCCCCCCCCCCCCCCCCccc
Q 011178 220 QPPQGYYIVISTRFTSQV-LSATSVLHYSNSAGSVSGPPPG-G-PTTQIDWSLEQARSLRRNLTASGPRPNPQGSYHYGL 296 (491)
Q Consensus 220 ~~~g~~~i~~~~~~~~~~-~~~~ail~y~~~~~~~~~~~p~-~-p~~~~~~~~~~~~~~~~~l~~~~~~~~p~~~~~~~~ 296 (491)
.+|+||...+.. .+. ....|.|....... ..... . +..-.||.......+...+...
T Consensus 161 -q~GT~WYHsH~~--~q~~~GL~G~lIV~~p~~---~~yD~d~~~l~l~Dw~~~~~~~~~~~~~~~-------------- 220 (580)
T 3sqr_A 161 -QYGTTWYHSHFS--LQYGDGLFGPLIINGPAT---ADYDEDVGVIFLQDWAHESVFEIWDTARLG-------------- 220 (580)
T ss_dssp -CCEEEEEEECST--TGGGGTCEEEEEEECCCS---SCCSEEEEEEEEEEECSSCHHHHHHHHTTS--------------
T ss_pred -CCcceEEeeccc--ccccCcCEEEEEeeCccc---CCCCccceEEEEEEEecCCHHHHHHHHhcc--------------
Confidence 479999988762 222 13344444332210 00000 0 0000011111100000000000
Q ss_pred cccceEEEEeccccCcCCeEeEEEcCeeeeCCCCccccccccCCCCccccCCCCCCCCCCCcceeeeEEeecCCcEEEEE
Q 011178 297 INTTHTIRLQNTAPTINGKQRYAVNSVSFIPADTPLKLADYFKIPGVFSVGSIPDNPTGGGAYLQTSVMAADFRGFAEVV 376 (491)
Q Consensus 297 ~~~~~~~~l~~~~~~~~~~~~~~iNg~~f~~~~~p~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~g~~v~~~ 376 (491)
.........|||+....-+ +. + ..++........+.++.|++++|+
T Consensus 221 --------------~~~~~d~~liNG~~~~~c~-~~---------~----------~~~~~~~~~~~~~~v~~G~~yRlR 266 (580)
T 3sqr_A 221 --------------APPALENTLMNGTNTFDCS-AS---------T----------DPNCVGGGKKFELTFVEGTKYRLR 266 (580)
T ss_dssp --------------CCCCBSEEEETTBCCCCCT-TC---------C----------CTTBCCCCCCCEEECCTTCEEEEE
T ss_pred --------------CCCCCceEEECCcccCCCc-cc---------c----------ccccccCCCceeEEEcCCCEEEEE
Confidence 0001123567887432100 00 0 000000012346788999999999
Q ss_pred EEcCCCCC-CceeccCCCeEEEeeccCCCCCCCCCCcccCCCCceeeEEeCCCCEEEEEEEccC-cceeeeeecc
Q 011178 377 FENPEDTL-QSWHIDGHNFFAVGMDGGEWTPASRLTYNLRDTISRCTVQVYPKSWTAVYVPLDN-VGMWNIRSEN 449 (491)
Q Consensus 377 i~N~~~~~-HP~HlHG~~F~Vl~~g~g~~~~~~~~~~~~~~p~~rDTv~v~p~~~~~irf~adn-pG~w~~HCHi 449 (491)
|+|.+... +-|||+||.|.|++.. |. ...|...|++.|.+|+.+.|.++++. +|.|-+.-..
T Consensus 267 lINa~~~~~~~~~i~gh~~~VIa~D-G~----------~v~P~~~~~l~i~pGqRydVlv~a~~~~g~Y~i~a~~ 330 (580)
T 3sqr_A 267 LINVGIDSHFEFAIDNHTLTVIAND-LV----------PIVPYTTDTLLIGIGQRYDVIVEANAAADNYWIRGNW 330 (580)
T ss_dssp EEECCSSCCEEEEETTCCEEEEEET-TE----------EEEEEEESSEEECTTCEEEEEEECCSCSSEEEEECCC
T ss_pred EEeccCCceeeEEeCCceEEEEEeC-Cc----------cCCceEeeEEEEccceEEEEEEEeCCCCCeEEEEEec
Confidence 99998654 7999999999999995 32 12366789999999999999999975 5888777554
No 67
>1iby_A Nitrosocyanin; RED copper, cupredoxin, beta hairpin, metal binding protein; 1.65A {Nitrosomonas europaea} SCOP: b.6.1.4 PDB: 1ibz_A 1ic0_A
Probab=98.89 E-value=2.1e-09 Score=89.12 Aligned_cols=75 Identities=19% Similarity=0.151 Sum_probs=56.4
Q ss_pred CCCeEEE--eeeEEEEEEecCCCCCeeeecccCCCCCCCCCCCCCCCCCCCCCCeEEEEEEeCCCccceeEeCCcccccc
Q 011178 10 LGCSLIT--HLYTHLVVLNFIYMAPLITLNGVQQRRNSWQDGVYGTNCPIPPGKNFTYVLQVKDQIGSYFYFPSLAFHKA 87 (491)
Q Consensus 10 ~G~~l~v--~d~v~i~~~N~l~~~~siH~HG~~~~~~~~~DG~~~~q~~i~PG~~~~Y~f~~~~~~Gt~wYH~H~~~q~~ 87 (491)
..++|+| |++|+++++|.... +||+.... .|. +..+.||++++|.|++ +++|+||||||.+....
T Consensus 36 ~p~~i~v~~G~~V~~~~~n~d~~-----~H~~~i~~----~~~---~~~i~pG~~~~~~f~~-~~~G~y~~~C~~~~~~~ 102 (112)
T 1iby_A 36 EPETLVVKKGDAVKVVVENKSPI-----SEGFSIDA----FGV---QEVIKAGETKTISFTA-DKAGAFTIWCQLHPKNI 102 (112)
T ss_dssp ESCEEEEETTCEEEEEEEECSSS-----CEEEEEGG----GTE---EEEECTTCEEEEEEEC-CSCEEEEEBCSSSCTTT
T ss_pred cCCEEEEeCCCEEEEEEEECCCC-----eEEEEEcC----CCc---eeEeCCCCEEEEEEEC-CCCEEEEEECCCCCchH
Confidence 4566665 57889999999754 66665422 122 3568999999999998 58999999999775433
Q ss_pred CCceeEEEEec
Q 011178 88 AGGYGGIKIAS 98 (491)
Q Consensus 88 ~Gl~G~liV~~ 98 (491)
+|.|.|+|++
T Consensus 103 -~M~g~i~V~~ 112 (112)
T 1iby_A 103 -HLPGTLNVVE 112 (112)
T ss_dssp -BCCEEEEEEC
T ss_pred -HCEEEEEEeC
Confidence 3999999974
No 68
>3tas_A Small laccase, multi-copper oxidase; two-domain laccase, oxidoreductase, secreted; HET: PG4; 2.30A {Streptomyces viridosporus} PDB: 3tbb_A 3tbc_A*
Probab=98.89 E-value=4.6e-09 Score=103.38 Aligned_cols=96 Identities=11% Similarity=0.106 Sum_probs=76.4
Q ss_pred cceEEEeCCCEEEEEEEEcCCCCeEeEEEeCceeEEEEecCccC---CCCccCeEEEcCCceEEEEEEeCC--CCcceEE
Q 011178 153 ANTFTVDQGKTYRFRISNVGISTSINFRIQGHKMLLVEVEGTHT---LQNTYDSLDIHLGQSYSVLVRADQ--PPQGYYI 227 (491)
Q Consensus 153 ~~~~~v~~g~~~rlR~iN~~~~~~~~~~i~~~~~~via~DG~~~---~p~~~~~l~l~pGeR~dv~v~~~~--~~g~~~i 227 (491)
.+.+.++.|++|||||+|++. ..+.|+|+||.|+|++.||... .+..++++.|.||||++++|.+.+ .||.|.+
T Consensus 173 ~~~l~v~~Ge~vr~~liN~g~-~~hpfHlHGh~F~v~~~~~~~~~~~~~~~~Dtv~l~Pger~~v~v~a~~~~nPG~w~~ 251 (313)
T 3tas_A 173 GPDFEATVGDRVEFVMITHGE-YYHTFHLHGHRWADNRTGMLTGPDDPSQVIDNKICGPADSFGFQVIAGEGVGAGAWMY 251 (313)
T ss_dssp CCCEEEETTCEEEEEEEEESS-CCEEEEETTCCEESSTTSSCCSTTCCCCEESEEEECTTCEEEEEEETTTTTCSEEEEE
T ss_pred ccccccccCCEEEEEEecccc-cceeeeecCCeeEEEEECCccCCCCCCeeeeEEEeCCCcceEEEEEeccCCCCEeEEE
Confidence 367899999999999999995 4899999999999999998765 356689999999999999998764 5899888
Q ss_pred EEEeeccCCCcceEEEEEecCCC
Q 011178 228 VISTRFTSQVLSATSVLHYSNSA 250 (491)
Q Consensus 228 ~~~~~~~~~~~~~~ail~y~~~~ 250 (491)
.++...- ......+++.+....
T Consensus 252 HCHi~~H-~~~GM~~~f~V~~~d 273 (313)
T 3tas_A 252 HCHVQSH-SDMGMVGLFLVKKPD 273 (313)
T ss_dssp EECSHHH-HHTTCEEEEEEECTT
T ss_pred EeCChHH-HHCCCeEEEEEECCC
Confidence 8775421 112356777776443
No 69
>2q9o_A Laccase-1; multicopper oxidase, 2-OXOH oxidoreductase; HET: OHI NAG MAN GOL; 1.30A {Melanocarpus albomyces} SCOP: b.6.1.3 b.6.1.3 b.6.1.3 PDB: 3fu7_A* 3fu8_A* 3fu7_B* 1gw0_A* 2ih9_A* 2ih8_A* 3fu9_A* 3qpk_A* 3dkh_A* 3pps_A*
Probab=98.85 E-value=3.4e-08 Score=104.82 Aligned_cols=230 Identities=11% Similarity=0.016 Sum_probs=144.3
Q ss_pred ceEEEcCcCCCcceEEEeCCCEEEEEEEEcCCCCeEeEEEeCceeE-EEEecCccCCCCccCeEEEcC-CceEEEEEEeC
Q 011178 142 DGLVINGRGSNANTFTVDQGKTYRFRISNVGISTSINFRIQGHKML-LVEVEGTHTLQNTYDSLDIHL-GQSYSVLVRAD 219 (491)
Q Consensus 142 ~~~~vNG~~~~~~~~~v~~g~~~rlR~iN~~~~~~~~~~i~~~~~~-via~DG~~~~p~~~~~l~l~p-GeR~dv~v~~~ 219 (491)
..+++||+.. .|+|++++|+++++++.|........+|.+|.... --..||.+- +..-.|.| |+++...++++
T Consensus 56 ~~~~~Ng~~P-GP~i~~~~GD~v~v~v~N~l~~~~tsiHwHG~~~~~~~~~DG~~~----~tq~~I~P~G~~~~Y~f~~~ 130 (559)
T 2q9o_A 56 KVMLINGNIM-GPNIVANWGDTVEVTVINNLVTNGTSIHWHGIXQKDTNLHDGANG----VTECPIPPKGGQRTYRWRAR 130 (559)
T ss_dssp EEEEETTBSS-CCCEEEETTCEEEEEEEEECSSCCBCEEEETCCCTTCGGGSCCBT----TTBCCBCTTTEEEEEEEECC
T ss_pred EEEEECCccc-CCcEEEeCCCEEEEEEEeCCCCCCceEEcCCCccCCCCCcCCCCc----cccCccCCCCCeEEEEEECC
Confidence 4789999864 79999999999999999999655778888886542 124588653 23345899 99999999998
Q ss_pred CCCcceEEEEEeeccCCC-cceEEEEEecCCCCCCCCCCCCC--CCccccchhhhhhhhccCCCCCCCCCCCCCCCCccc
Q 011178 220 QPPQGYYIVISTRFTSQV-LSATSVLHYSNSAGSVSGPPPGG--PTTQIDWSLEQARSLRRNLTASGPRPNPQGSYHYGL 296 (491)
Q Consensus 220 ~~~g~~~i~~~~~~~~~~-~~~~ail~y~~~~~~~~~~~p~~--p~~~~~~~~~~~~~~~~~l~~~~~~~~p~~~~~~~~ 296 (491)
| +|+||...+.. .+. ....|.|.+.+... ...... +..-.+|.......+..
T Consensus 131 q-~GT~wYH~H~~--~q~~~Gl~G~liV~~~~~---~~~d~d~~~l~l~Dw~~~~~~~~~~------------------- 185 (559)
T 2q9o_A 131 Q-YGTSWYHSHFS--AQYGNGVVGTIQINGPAS---LPYDIDLGVFPITDYYYRAADDLVH------------------- 185 (559)
T ss_dssp S-CEEEEEEECST--TGGGGTCEEEEEEECCCS---SCCSEEEEEEEEEEECSSCHHHHHH-------------------
T ss_pred C-CEEEEEEEccc--chhcCCceEEEEecCCCc---CCCcccceEEEEeccccCCHHHHhh-------------------
Confidence 5 79999988763 222 12344444433211 000000 00000111110000000
Q ss_pred cccceEEEEeccccCcCCeEeEEEcCeeeeCCCCccccccccCCCCccccCCCCCCCCCCCcceeeeEEeecCCcEEEEE
Q 011178 297 INTTHTIRLQNTAPTINGKQRYAVNSVSFIPADTPLKLADYFKIPGVFSVGSIPDNPTGGGAYLQTSVMAADFRGFAEVV 376 (491)
Q Consensus 297 ~~~~~~~~l~~~~~~~~~~~~~~iNg~~f~~~~~p~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~g~~v~~~ 376 (491)
..............|||+.+.. .. .+ .....+.++.|++++|+
T Consensus 186 ---------~~~~~~~~~~d~~liNG~~~~~----~~--------------------~~----g~~~~~~v~~g~~~RlR 228 (559)
T 2q9o_A 186 ---------FTQNNAPPFSDNVLINGTAVNP----NT--------------------GE----GQYANVTLTPGKRHRLR 228 (559)
T ss_dssp ---------HHTTSCCCCBSEEEETTBCBCT----TT--------------------CC----BCCCEEEECTTCEEEEE
T ss_pred ---------hhhcCCCCccceeEECCccccC----cC--------------------CC----CCceEEEEcCCCEEEEE
Confidence 0000000011246788876421 00 00 01235788999999999
Q ss_pred EEcCCCC-CCceeccCCCeEEEeeccCCCCCCCCCCcccCCCCceeeEEeCCCCEEEEEEEccC-cceeeeeecc
Q 011178 377 FENPEDT-LQSWHIDGHNFFAVGMDGGEWTPASRLTYNLRDTISRCTVQVYPKSWTAVYVPLDN-VGMWNIRSEN 449 (491)
Q Consensus 377 i~N~~~~-~HP~HlHG~~F~Vl~~g~g~~~~~~~~~~~~~~p~~rDTv~v~p~~~~~irf~adn-pG~w~~HCHi 449 (491)
|.|.+.. .+-|||+||.|.|++..+.. ..|...|++.|.+|+.+.|.+.++. +|.+-+....
T Consensus 229 liNa~~~~~~~~~i~gh~~~vi~~DG~~-----------~~p~~~~~l~l~pgeR~dvlv~~~~~~g~y~i~a~~ 292 (559)
T 2q9o_A 229 ILNTSTENHFQVSLVNHTMTVIAADMVP-----------VNAMTVDSLFLAVGQRYDVVIDASRAPDNYWFNVTF 292 (559)
T ss_dssp EEECCSSCCEEEEETTBCEEEEEETTEE-----------EEEEEESCEEECTTCEEEEEEECCSCSSEEEEEEEC
T ss_pred EEecCCCceEEEEECCCceEEEecCCcc-----------cCceEeCeEEEccEEEEEEEEECCCCCCcEEEEEEe
Confidence 9999865 48999999999999996321 1356789999999999999999965 6777666654
No 70
>1qhq_A Protein (auracyanin); electron transfer, cupredoxin, blue copper protein, azurin-L thermophIle; 1.55A {Chloroflexus aurantiacus} SCOP: b.6.1.1 PDB: 1ov8_A
Probab=98.79 E-value=1.1e-08 Score=88.37 Aligned_cols=95 Identities=12% Similarity=0.028 Sum_probs=70.4
Q ss_pred EeecCCcEEEEEEEc--CCCCCCceeccCC--CeEEEe-ec--cC---CCCCCCCCCcccCCCCceeeEEeCCCCEEEEE
Q 011178 365 MAADFRGFAEVVFEN--PEDTLQSWHIDGH--NFFAVG-MD--GG---EWTPASRLTYNLRDTISRCTVQVYPKSWTAVY 434 (491)
Q Consensus 365 ~~~~~g~~v~~~i~N--~~~~~HP~HlHG~--~F~Vl~-~g--~g---~~~~~~~~~~~~~~p~~rDTv~v~p~~~~~ir 434 (491)
++++.|+.|.|++.| .+.+.|.||++.. .|.-+. .+ .+ .|-+. .-....+++|..|.||+...+.
T Consensus 35 i~v~~G~tV~~~~~N~~~~~~~H~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~t~~l~pG~~~~~~ 109 (140)
T 1qhq_A 35 LSLPANTVVRLDFVNQNNLGVQHNWVLVNGGDDVAAAVNTAAQNNADALFVPP-----PDTPNALAWTAMLNAGESGSVT 109 (140)
T ss_dssp EEEETTCEEEEEEEECCSSCCCBCCEEESSSHHHHHHHHHHHHTCGGGTTCCC-----TTCTTEEEECCCBCTTEEEEEE
T ss_pred EEECCCCEEEEEEECCCCCCCceeEEEeccCcchhhhhhhhhhhcccccccCc-----cccccccccceeeCCCceeEEE
Confidence 678999999999999 6668899999843 121100 00 00 01000 0011347899999999999999
Q ss_pred EEccCcceeeeeecchhhhhcceEEEEEEe
Q 011178 435 VPLDNVGMWNIRSENWARQYLGQQFYLRVY 464 (491)
Q Consensus 435 f~adnpG~w~~HCHil~H~d~GMm~~~~V~ 464 (491)
|.++.||.|.|||++..|...||...+.|.
T Consensus 110 ~~~~~~G~y~f~C~~~~H~~~GM~g~i~V~ 139 (140)
T 1qhq_A 110 FRTPAPGTYLYICTFPGHYLAGMKGTLTVT 139 (140)
T ss_dssp EECCSSEEEEEECCSTTTTTTTCEEEEEEE
T ss_pred EEeCCCeeEEEEeCCcCHhhcCCEEEEEEc
Confidence 999999999999999999999999999885
No 71
>3zx1_A Oxidoreductase, putative; laccase, metallo-oxidase, cuprous oxidase; 1.95A {Campylobacter jejuni subsp}
Probab=98.79 E-value=2.6e-07 Score=95.83 Aligned_cols=206 Identities=12% Similarity=0.125 Sum_probs=132.2
Q ss_pred CeEEEee-eEEEEEEecCC-CCCeeeecccCCCCCCCCCCCC----C--CCCCCCCCCeEEEEEEeCCCccceeEeCCcc
Q 011178 12 CSLITHL-YTHLVVLNFIY-MAPLITLNGVQQRRNSWQDGVY----G--TNCPIPPGKNFTYVLQVKDQIGSYFYFPSLA 83 (491)
Q Consensus 12 ~~l~v~d-~v~i~~~N~l~-~~~siH~HG~~~~~~~~~DG~~----~--~q~~i~PG~~~~Y~f~~~~~~Gt~wYH~H~~ 83 (491)
+++.|.. . ++|+.|... ....+|++|..... -..||.. . ....|.|||+++..++++ +.|+|-.-++..
T Consensus 222 p~l~v~~g~-RlRliNa~~~~~~~l~i~g~~~~v-Ia~DGg~~~~P~~~~~l~l~pgeR~dvlv~~~-~~~~~~l~~~~~ 298 (481)
T 3zx1_A 222 PKIKLATNE-RIRIYNATAARYLNLRIQGAKFIL-VGTDGGLIEKTIYKEELFLSPASRVEVLIDAP-KDGNFKLESAYY 298 (481)
T ss_dssp CEEEEETTE-EEEEEECCSSCCEEEEETTCEEEE-EEETTEEEEEEEEESSEEECTTCEEEEEEECS-SCEEEEEEECCC
T ss_pred ceEEecCCC-EEEEEecCCCeEEEEEECCCceEE-EEcCCCccCCceEeCeEEECCccEEEEEEEcC-CCcEEEEEEecc
Confidence 3444432 3 899999975 55689998876422 2378642 2 345699999999999995 678877766532
Q ss_pred ccccCCc----------eeEEEEecCC-CCCC------CCCCCCCcceEEeeecccC-------CHHHHHHHHhcCCCCC
Q 011178 84 FHKAAGG----------YGGIKIASRP-LIPV------PFDPPAGDFTILAGDWYKK-------NHTDLKAILDSGSDLP 139 (491)
Q Consensus 84 ~q~~~Gl----------~G~liV~~~~-~~~~------~~~~~~~e~~l~l~d~~~~-------~~~~~~~~~~~~~~~~ 139 (491)
.. .|+ ..-+-+.... ..|. +.+..+.+..+.|+....+ ........+
T Consensus 299 ~~--~g~~~~~~~~~~~~~~~~~~~~~~~lP~~l~~~~~~~~~~~~r~~~l~~~~~~~~~~~~~~~~~~~~~~------- 369 (481)
T 3zx1_A 299 DR--DKMMVKEEPNTLFLANINLKKENVELPKNLKIFKPSEEPKEFKEIIMSEDHMQMHGMMGKSEGELKIAL------- 369 (481)
T ss_dssp CC--CCSSCCCCCCCEEEEEEEEECCCCCCCSCSCCCCCCCCCCEEEEEEEEECCSTTTTGGGCCHHHHHHHH-------
T ss_pred cc--cCccccCCCCceeEEEEecCCCCccCCccccCCCCCCCCCcEEEEEEeccchhcccccccccccccccc-------
Confidence 11 111 1111222111 1111 0111122333444332110 000000000
Q ss_pred CCceEEEcCcCCC--cceEEEeCCCEEEEEEEEcCCCCeEeEEEeCceeEEEEe--cCccC---CCCccCeEEEcCCceE
Q 011178 140 FPDGLVINGRGSN--ANTFTVDQGKTYRFRISNVGISTSINFRIQGHKMLLVEV--EGTHT---LQNTYDSLDIHLGQSY 212 (491)
Q Consensus 140 ~~~~~~vNG~~~~--~~~~~v~~g~~~rlR~iN~~~~~~~~~~i~~~~~~via~--DG~~~---~p~~~~~l~l~pGeR~ 212 (491)
...++|||+.+. .+.+.++.|++++|+|+|.+. ..+.|||+||.|+|++. +|... ++...|++.|.||+++
T Consensus 370 -~~~~~iNG~~~~~~~~~~~~~~G~~v~w~l~N~~~-~~Hp~HlHG~~F~vl~~~~~g~~~~~~~~~~kDTv~v~Pg~~~ 447 (481)
T 3zx1_A 370 -ASMFLINRKSYDLKRIDLSSKLGVVEDWIVINKSH-MDHPFHIHGTQFELISSKLNGKVQKAEFRALRDTINVRPNEEL 447 (481)
T ss_dssp -HTTEEETTBCCCTTCCCEEEETTCCEEEEEEECSS-SCEEEEETTCCEEEEEEEETTEEEECSSCCEESEEEECTTCEE
T ss_pred -cceeEECCEeCCCCCceEEeCCCCEEEEEEEcCCC-CceeEEEeccEEEEEEecccCCCCCcccCcccceEEECCCCEE
Confidence 125899999863 467999999999999999764 58999999999999999 99765 3456799999999999
Q ss_pred EEEEEeCCCCcceEEEEEee
Q 011178 213 SVLVRADQPPQGYYIVISTR 232 (491)
Q Consensus 213 dv~v~~~~~~g~~~i~~~~~ 232 (491)
.|.++++ .+|.|.+.++..
T Consensus 448 ~i~~~~d-~pG~w~~HCHil 466 (481)
T 3zx1_A 448 RLRMKQD-FKGLRMYHCHIL 466 (481)
T ss_dssp EEEECCC-SCEEEEEEESSH
T ss_pred EEEEEcC-CCeeEEEEcCCh
Confidence 9999997 789888877653
No 72
>1zpu_A Iron transport multicopper oxidase FET3; ferroxidase, oxidoreduc; HET: NAG BMA MAN NDG; 2.80A {Saccharomyces cerevisiae}
Probab=98.78 E-value=5.2e-08 Score=102.77 Aligned_cols=225 Identities=16% Similarity=0.120 Sum_probs=142.7
Q ss_pred CceEEEcCcCCCcceEEEeCCCEEEEEEEEcCCCCeEeEEEeCceeEE-EEecCccCCCCccCeEEEcCCceEEEEEEeC
Q 011178 141 PDGLVINGRGSNANTFTVDQGKTYRFRISNVGISTSINFRIQGHKMLL-VEVEGTHTLQNTYDSLDIHLGQSYSVLVRAD 219 (491)
Q Consensus 141 ~~~~~vNG~~~~~~~~~v~~g~~~rlR~iN~~~~~~~~~~i~~~~~~v-ia~DG~~~~p~~~~~l~l~pGeR~dv~v~~~ 219 (491)
-..+++||+.. .|+|+++.|+++++++.|........+|.+|..... -..||.+- +..-.|.||+++...++++
T Consensus 22 ~~~~~~Ng~~P-GP~i~~~~Gd~v~v~v~N~l~~~~tsiHwHG~~~~~~~~~DG~~~----vtq~pI~PG~~~~Y~f~~~ 96 (534)
T 1zpu_A 22 RPVITCNGQFP-WPDITVNKGDRVQIYLTNGMNNTNTSMHFHGLFQNGTASMDGVPF----LTQCPIAPGSTMLYNFTVD 96 (534)
T ss_dssp EEEEEETTBSS-CCCEEEETTCEEEEEEECCCSSCCBCCEEETCCCTTCGGGSCCBT----TTBCCBCTTCEEEEEEECS
T ss_pred EEEEEECCccC-CccEEEECCCEEEEEEEeCCCCCCeeEEcCCcccCCCCcccCCCc----cccCCcCCCCeEEEEEEeC
Confidence 35789999864 799999999999999999987557788888865431 24688652 2334589999999999998
Q ss_pred CCCcceEEEEEeeccCCC-cceEEEEEecCCCCCCCCCCCCCCCccc-----cchhhhhhhhccCCCCCCCCCCCCCCCC
Q 011178 220 QPPQGYYIVISTRFTSQV-LSATSVLHYSNSAGSVSGPPPGGPTTQI-----DWSLEQARSLRRNLTASGPRPNPQGSYH 293 (491)
Q Consensus 220 ~~~g~~~i~~~~~~~~~~-~~~~ail~y~~~~~~~~~~~p~~p~~~~-----~~~~~~~~~~~~~l~~~~~~~~p~~~~~ 293 (491)
+.+|+||...+.. .+. ....|.|...+... +. ....+. ||.......+...+.. ...+.+
T Consensus 97 ~~~GT~wYH~H~~--~q~~~Gl~G~liV~~~~~----p~--~~d~e~~l~l~Dw~~~~~~~~~~~~~~---~~~~~g--- 162 (534)
T 1zpu_A 97 YNVGTYWYHSHTD--GQYEDGMKGLFIIKDDSF----PY--DYDEELSLSLSEWYHDLVTDLTKSFMS---VYNPTG--- 162 (534)
T ss_dssp SCCEEEEEECCSS--SGGGGTCEEEEEEECTTC----CS--CCSEEEEEEEEEECSSCHHHHHHHHSS---TTCTTC---
T ss_pred ccceeEEEEEcCc--ccccCcceeeEEeCCCCC----CC--CCcceEEEEeeccccCCHHHHHHHHhc---cccCCC---
Confidence 6789999987753 222 12344444443221 11 010111 1211111000000000 000000
Q ss_pred ccccccceEEEEeccccCcCCeEeEEEcCeeeeCCCCccccccccCCCCccccCCCCCCCCCCCcceeeeEEeecCCcEE
Q 011178 294 YGLINTTHTIRLQNTAPTINGKQRYAVNSVSFIPADTPLKLADYFKIPGVFSVGSIPDNPTGGGAYLQTSVMAADFRGFA 373 (491)
Q Consensus 294 ~~~~~~~~~~~l~~~~~~~~~~~~~~iNg~~f~~~~~p~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~g~~v 373 (491)
...-.....|||+.. ..+.++.|+++
T Consensus 163 -----------------~~~~~d~~liNG~~~-------------------------------------~~~~v~~g~~~ 188 (534)
T 1zpu_A 163 -----------------AEPIPQNLIVNNTMN-------------------------------------LTWEVQPDTTY 188 (534)
T ss_dssp -----------------CCCCCSEEEETTBSS-------------------------------------CEEECCSSCEE
T ss_pred -----------------CCCCCceEEECCCCc-------------------------------------eEEEEECCCEE
Confidence 000012345666421 23678889999
Q ss_pred EEEEEcCCCC-CCceeccCCCeEEEeeccCCCCCCCCCCcccCCCCceeeEEeCCCCEEEEEEEccC--cceeeeeecc
Q 011178 374 EVVFENPEDT-LQSWHIDGHNFFAVGMDGGEWTPASRLTYNLRDTISRCTVQVYPKSWTAVYVPLDN--VGMWNIRSEN 449 (491)
Q Consensus 374 ~~~i~N~~~~-~HP~HlHG~~F~Vl~~g~g~~~~~~~~~~~~~~p~~rDTv~v~p~~~~~irf~adn--pG~w~~HCHi 449 (491)
+|+|.|.+.. .+-|||+||.|.|++..++. ..|...|++.|.+|+.+.|.+.++. .|.+.+....
T Consensus 189 RlRliNa~~~~~~~~~i~gh~~~vi~~DG~~-----------~~P~~~~~l~l~~gqR~dvlv~~~~~~~~~y~i~~~~ 256 (534)
T 1zpu_A 189 LLRIVNVGGFVSQYFWIEDHEMTVVEIDGIT-----------TEKNVTDMLYITVAQRYTVLVHTKNDTDKNFAIMQKF 256 (534)
T ss_dssp EEEEEECCSSCCEEEEETTBCEEEEEETTEE-----------EEEEEESCEEECTTCEEEEEEECCSCSSCCEEEEEEE
T ss_pred EEEEEeccCCceEEEEEcCCeeEEEeccCcC-----------ccccEeceEEECccceEEEEEEcCCCCCCcEEEEEec
Confidence 9999999865 48999999999999996431 1356679999999999999999964 3667777654
No 73
>2aan_A Auracyanin A; cupredoxin fold, electron transport; 1.85A {Chloroflexus aurantiacus}
Probab=98.76 E-value=1.6e-08 Score=87.13 Aligned_cols=79 Identities=9% Similarity=0.002 Sum_probs=56.5
Q ss_pred eeeEEEEEEecCCC-CCeeeecccCC-----------------CCCCCCCC-CCCCCCCCCCCCeEEEEEEeCCCcccee
Q 011178 17 HLYTHLVVLNFIYM-APLITLNGVQQ-----------------RRNSWQDG-VYGTNCPIPPGKNFTYVLQVKDQIGSYF 77 (491)
Q Consensus 17 ~d~v~i~~~N~l~~-~~siH~HG~~~-----------------~~~~~~DG-~~~~q~~i~PG~~~~Y~f~~~~~~Gt~w 77 (491)
||+|+++++|.-.. +++++.|+... ...+..+. +......|.||+++++.|++ +++|+|+
T Consensus 42 G~~V~~~~~N~~~~~~H~~~i~~~~~~~~~~~~~~~~~~g~~~~~~p~~~~~~~~~t~~l~pGet~~v~f~~-~~pG~y~ 120 (139)
T 2aan_A 42 GQTVTIRFKNNSAVQQHNWILVKGGEAEAANIANAGLSAGPAANYLPADKSNIIAESPLANGNETVEVTFTA-PAAGTYL 120 (139)
T ss_dssp TCEEEEEEECCCSSCCBCCEEESSCHHHHHHHHHHHHHHCGGGTTCCSCCTTEEEECCCBCTTCEEEEEEEC-CSSEEEE
T ss_pred CCEEEEEEEeCCCCCCeeEEEeccccccchhhhhhhhcccccccccCcccccccccccccCCCCEEEEEEEC-CCCeEEE
Confidence 46678889998766 78888887421 00000111 11112348999999999999 4899999
Q ss_pred EeCCccccccCCceeEEEEe
Q 011178 78 YFPSLAFHKAAGGYGGIKIA 97 (491)
Q Consensus 78 YH~H~~~q~~~Gl~G~liV~ 97 (491)
||||...+.. ||.|.|+|+
T Consensus 121 f~C~~~~H~~-GM~G~i~V~ 139 (139)
T 2aan_A 121 YICTVPGHYP-LMQGKLVVN 139 (139)
T ss_dssp EECCSTTTTT-TSEEEEEEC
T ss_pred EEcCCCChHH-cCEEEEEEC
Confidence 9999887777 999999984
No 74
>1pcs_A Plastocyanin; electron transport; 2.15A {Synechocystis SP} SCOP: b.6.1.1 PDB: 1m9w_A 1j5c_A 1j5d_A 1jxd_A 1jxf_A
Probab=98.73 E-value=3.4e-08 Score=79.60 Aligned_cols=77 Identities=9% Similarity=-0.062 Sum_probs=59.8
Q ss_pred EEeecCCcEEEEEEEcCCCCCCceeccCCCeEEEeeccCCCCCCCCCCcccCCCCc-eeeEEeCCCCEEEEEEEccCcce
Q 011178 364 VMAADFRGFAEVVFENPEDTLQSWHIDGHNFFAVGMDGGEWTPASRLTYNLRDTIS-RCTVQVYPKSWTAVYVPLDNVGM 442 (491)
Q Consensus 364 ~~~~~~g~~v~~~i~N~~~~~HP~HlHG~~F~Vl~~g~g~~~~~~~~~~~~~~p~~-rDTv~v~p~~~~~irf~adnpG~ 442 (491)
.+.++.|++|.|+ |.+...|.+|+++..+- +.. .+.+ .|+..+.||+...+.| +.||.
T Consensus 20 ~i~v~~G~~V~~~--n~~~~~H~~~~~~~~~p--g~~---------------~~~~~~~~~~~~pG~~~~~tf--~~~G~ 78 (98)
T 1pcs_A 20 TVTIKAGEEVKWV--NNKLSPHNIVFDADGVP--ADT---------------AAKLSHKGLLFAAGESFTSTF--TEPGT 78 (98)
T ss_dssp EEEECTTCEEEEE--ECSSCCEEEEECCSSSC--HHH---------------HHHHCEEEEECSTTCEEEEEC--CSCEE
T ss_pred EEEECCCCEEEEE--ECCCCCcEEEEeCCCCC--ccc---------------cccccccccccCCCCEEEEEc--CCCeE
Confidence 4688999999886 66667899999875321 000 0012 5789999999988876 78999
Q ss_pred eeeeecchhhhhcceEEEEEE
Q 011178 443 WNIRSENWARQYLGQQFYLRV 463 (491)
Q Consensus 443 w~~HCHil~H~d~GMm~~~~V 463 (491)
|.|||+ .|..+||+..+.|
T Consensus 79 y~~~C~--~H~~~gM~G~i~V 97 (98)
T 1pcs_A 79 YTYYCE--PHRGAGMVGKVVV 97 (98)
T ss_dssp EEEECG--GGTTTTCEEEEEE
T ss_pred EEEEcC--CccccCCeEEEEE
Confidence 999999 5999999999987
No 75
>2plt_A Plastocyanin; electron transport; 1.50A {Chlamydomonas reinhardtii} SCOP: b.6.1.1
Probab=98.69 E-value=5.6e-08 Score=78.29 Aligned_cols=80 Identities=16% Similarity=0.065 Sum_probs=60.7
Q ss_pred eEEeecCCcEEEEEEEcCCCCCCceeccCCCeEEEeeccCCCCCCCCCCcccCCCCceeeEEeCCCCEEEEEEEccCcce
Q 011178 363 SVMAADFRGFAEVVFENPEDTLQSWHIDGHNFFAVGMDGGEWTPASRLTYNLRDTISRCTVQVYPKSWTAVYVPLDNVGM 442 (491)
Q Consensus 363 ~~~~~~~g~~v~~~i~N~~~~~HP~HlHG~~F~Vl~~g~g~~~~~~~~~~~~~~p~~rDTv~v~p~~~~~irf~adnpG~ 442 (491)
..+.++.|++|+| .|.+...|.+|+|+..+ ...++. ...++|+..+.||+...++| +.||.
T Consensus 18 ~~i~v~~G~~V~~--~n~~~~~H~~~~~~~~~------p~~~~~---------~~~~~~~~~~~pG~~~~~tf--~~~G~ 78 (98)
T 2plt_A 18 KTLTIKSGETVNF--VNNAGFPHNIVFDEDAI------PSGVNA---------DAISRDDYLNAPGETYSVKL--TAAGE 78 (98)
T ss_dssp SEEEECTTCEEEE--EECSSCCEEEEECGGGS------CTTCCH---------HHHCEEEEECSTTCEEEEEC--CSCEE
T ss_pred CEEEECCCCEEEE--EECCCCceEEEEeCCCC------CCcccc---------ccccccceecCCCCEEEEEe--CCCeE
Confidence 3478899999987 67777789999987422 000000 01257899999999988866 58999
Q ss_pred eeeeecchhhhhcceEEEEEE
Q 011178 443 WNIRSENWARQYLGQQFYLRV 463 (491)
Q Consensus 443 w~~HCHil~H~d~GMm~~~~V 463 (491)
|.|||| .|.+.||+..+.|
T Consensus 79 y~y~C~--~H~~~gM~G~i~V 97 (98)
T 2plt_A 79 YGYYCE--PHQGAGMVGKIIV 97 (98)
T ss_dssp EEEECG--GGGGGTCEEEEEE
T ss_pred EEEEcC--CccccCCeEEEEE
Confidence 999999 5999999999987
No 76
>1fwx_A Nitrous oxide reductase; beta-propeller domain, cupredoxin domain, CUZ site, CUA site oxidoreductase; 1.60A {Paracoccus denitrificans} SCOP: b.6.1.4 b.69.3.1 PDB: 2iwk_A 2iwf_A
Probab=98.69 E-value=2e-08 Score=105.52 Aligned_cols=85 Identities=16% Similarity=0.127 Sum_probs=61.7
Q ss_pred cccCCCCeEEE--eeeEEEEEEecCCCCCeeeecccCCCCCCCCCCCCCCCCCCCCCCeEEEEEEeCCCccceeEeCCcc
Q 011178 6 HFSSLGCSLIT--HLYTHLVVLNFIYMAPLITLNGVQQRRNSWQDGVYGTNCPIPPGKNFTYVLQVKDQIGSYFYFPSLA 83 (491)
Q Consensus 6 ~~~~~G~~l~v--~d~v~i~~~N~l~~~~siH~HG~~~~~~~~~DG~~~~q~~i~PG~~~~Y~f~~~~~~Gt~wYH~H~~ 83 (491)
..+.++++|+| ||+|+++++|....... +||+.+.. .|+ ++.|.||++++|+|++ +++|+||||||..
T Consensus 507 n~~f~pp~I~V~~Gd~V~~~ltN~d~~~Dv--~Hgf~ip~----~gv---~~~i~PG~t~t~~Fta-~~pGtY~yhC~e~ 576 (595)
T 1fwx_A 507 APSFSIESFTVKEGDEVTVIVTNLDEIDDL--THGFTMGN----YGV---AMEIGPQMTSSVTFVA-ANPGVYWYYCQWF 576 (595)
T ss_dssp TTEESCSEEEEETTCEEEEEEEECCCSTTC--CEEEEETT----TTE---EEEECTTCEEEEEEEC-CSCEEEEEECCSC
T ss_pred cCcccCCEEEEECCCEEEEEEEeCCCCCCc--eeeEEecC----CCc---ceeeCCCCeEEEEEEC-CCCEEEEEECCCC
Confidence 34567888877 58999999998653222 47776532 232 2568999999999999 5999999999931
Q ss_pred -ccccCCceeEEEEecCC
Q 011178 84 -FHKAAGGYGGIKIASRP 100 (491)
Q Consensus 84 -~q~~~Gl~G~liV~~~~ 100 (491)
.....||+|.|+|++++
T Consensus 577 Cg~~H~gM~G~IiV~p~~ 594 (595)
T 1fwx_A 577 CHALHMEMRGRMLVEPKE 594 (595)
T ss_dssp CSTTCTTCEEEEEEECC-
T ss_pred CCCCccCCEEEEEEEcCC
Confidence 11123999999999753
No 77
>3t9w_A Small laccase, multi-copper oxidase; two-domain copper oxidase, Cu-binding, oxidoreducta; 1.50A {Amycolatopsis SP}
Probab=98.64 E-value=4.7e-08 Score=95.43 Aligned_cols=104 Identities=20% Similarity=0.262 Sum_probs=81.4
Q ss_pred EEEcCcCC-CcceEEEeCCCEEEEEEEEcCCCCeEeEEEeCceeEEEEecCccCCC---CccCeEEEcCCceEEEEEEeC
Q 011178 144 LVINGRGS-NANTFTVDQGKTYRFRISNVGISTSINFRIQGHKMLLVEVEGTHTLQ---NTYDSLDIHLGQSYSVLVRAD 219 (491)
Q Consensus 144 ~~vNG~~~-~~~~~~v~~g~~~rlR~iN~~~~~~~~~~i~~~~~~via~DG~~~~p---~~~~~l~l~pGeR~dv~v~~~ 219 (491)
+.+||+.+ +.+.++++.|++|||||+|++.. .+.|+|+||.|+|++.|+....+ ...|++.|.||||++++|.+.
T Consensus 179 ~~~Ng~~~~~~p~l~v~~Ge~Vr~~liN~~~~-~HpfHlHGh~F~v~~~g~~~~~~~~~~~~Dtv~v~PGe~~~~~via~ 257 (299)
T 3t9w_A 179 MMINNRAHHDAPTFEANLGERVEWIAIGHGSN-FHTFHLHGHRWLDNRTGMRTSEYDPSPLIDIKDLNPGVSFGFQVIAG 257 (299)
T ss_dssp TEETTCCTTCCCEEEEETTCEEEEEEEEESSC-CCEEEETTCCEESSSSSSCCSTTCCCCEESEEECCTTCEEEEEEETT
T ss_pred eeecCccccccccceecCCCEEEEEEEecccc-ceeeeEecceEEEEecccccCCcCCCCceeeEEeCCceeEEEEEEEe
Confidence 56799875 46899999999999999999975 79999999999999998876533 356999999999999999765
Q ss_pred C--CCcceEEEEEeeccCCCcceEEEEEecCC
Q 011178 220 Q--PPQGYYIVISTRFTSQVLSATSVLHYSNS 249 (491)
Q Consensus 220 ~--~~g~~~i~~~~~~~~~~~~~~ail~y~~~ 249 (491)
+ .||.|.+.+....-. .....+++.+...
T Consensus 258 ~~dnPG~w~~HCHi~~H~-~~GM~~~f~V~~~ 288 (299)
T 3t9w_A 258 EGVGPGMWMYHCHVQNHS-DMGMAGMFLVRNA 288 (299)
T ss_dssp TTTCSEEEEEEECSHHHH-HTTCEEEEEEECT
T ss_pred eCCCCeeEEEEcCCHHHH-hcCCeEEEEEECC
Confidence 4 589998887754211 1234566666543
No 78
>1bxv_A Plastocyanin; copper protein, electron transfer; 1.80A {Synechococcus elongatus} SCOP: b.6.1.1 PDB: 1bxu_A
Probab=98.63 E-value=8.2e-08 Score=76.07 Aligned_cols=71 Identities=14% Similarity=0.113 Sum_probs=57.3
Q ss_pred EEeecCCcEEEEEEEcCCCCCCceeccCCCeEEEeeccCCCCCCCCCCcccCCCCceeeEEeCCCCEEEEEEEccCccee
Q 011178 364 VMAADFRGFAEVVFENPEDTLQSWHIDGHNFFAVGMDGGEWTPASRLTYNLRDTISRCTVQVYPKSWTAVYVPLDNVGMW 443 (491)
Q Consensus 364 ~~~~~~g~~v~~~i~N~~~~~HP~HlHG~~F~Vl~~g~g~~~~~~~~~~~~~~p~~rDTv~v~p~~~~~irf~adnpG~w 443 (491)
.+.++.|+.|.|+ |.+...|.+|+++.. . ...++..+.||+...+.| +.||.|
T Consensus 20 ~i~v~~Gd~V~~~--n~~~~~H~v~~~~~~---------~--------------~~~~~~~~~~g~~~~~~f--~~~G~y 72 (91)
T 1bxv_A 20 TIEIQAGDTVQWV--NNKLAPHNVVVEGQP---------E--------------LSHKDLAFSPGETFEATF--SEPGTY 72 (91)
T ss_dssp EEEECTTCEEEEE--ECSSCCEEEEETTCG---------G--------------GCEEEEECSTTCEEEEEC--CSCEEE
T ss_pred EEEECCCCEEEEE--ECCCCCcEEEEeCCC---------c--------------cCcccceeCCCCEEEEEe--CCCEEE
Confidence 4678999999886 666678999998720 0 124788899999888766 889999
Q ss_pred eeeecchhhhhcceEEEEEE
Q 011178 444 NIRSENWARQYLGQQFYLRV 463 (491)
Q Consensus 444 ~~HCHil~H~d~GMm~~~~V 463 (491)
.|||+ .|...||...+.|
T Consensus 73 ~~~C~--~H~~~gM~g~i~V 90 (91)
T 1bxv_A 73 TYYCE--PHRGAGMVGKIVV 90 (91)
T ss_dssp EEECT--TTGGGTCEEEEEE
T ss_pred EEEeC--CCccCCCEEEEEE
Confidence 99999 6999999999987
No 79
>3aw5_A Multicopper oxidase; beta barrel, oxidoreductase; 2.00A {Pyrobaculum aerophilum}
Probab=98.57 E-value=1.3e-06 Score=89.97 Aligned_cols=194 Identities=15% Similarity=0.105 Sum_probs=122.0
Q ss_pred CeEEE--eeeEEEEEEecCC-CCCeeee--cc---cCCCCCCCCCCCCC------CCCCCCCCCeEEEEEEeCCCcccee
Q 011178 12 CSLIT--HLYTHLVVLNFIY-MAPLITL--NG---VQQRRNSWQDGVYG------TNCPIPPGKNFTYVLQVKDQIGSYF 77 (491)
Q Consensus 12 ~~l~v--~d~v~i~~~N~l~-~~~siH~--HG---~~~~~~~~~DG~~~------~q~~i~PG~~~~Y~f~~~~~~Gt~w 77 (491)
+++.| | ++++|+.|... ....+|+ +| ..... -..||.+. ....|.||++++..++++ .+.||
T Consensus 180 p~~~v~~g-~~RlRliNa~~~~~~~~~i~~~~~~~~~~~v-ia~DG~~~~~P~~~~~l~l~pgeR~dvlv~~~--~~~y~ 255 (448)
T 3aw5_A 180 AVFKLSGG-SYRLRLVNGSNARLYMLSIVKKNGDVVPMRL-IAVDQGFLARPIEVRALFLAPAERAEVVVELG--EGVYL 255 (448)
T ss_dssp CEEEEEEE-EEEEEEEECSSSCCEEEEEEETTSCEECEEE-EEETTEEEEEEEEESCEEECTTCEEEEEEEEC--SEEEE
T ss_pred ceEEECCC-eEEEEEEcCCCcceEEEEEEcCCCCCccEEE-EEeCCCccCCceEeceEEECCcceEEEEEECC--CCceE
Confidence 44544 5 78999999976 4567999 76 32211 13788742 234599999999999995 47899
Q ss_pred EeCCccccccCC-------------ceeE--EEEecCCCC--CCCCC-------CCCCcceEEeeecccCCHHHHHHHHh
Q 011178 78 YFPSLAFHKAAG-------------GYGG--IKIASRPLI--PVPFD-------PPAGDFTILAGDWYKKNHTDLKAILD 133 (491)
Q Consensus 78 YH~H~~~q~~~G-------------l~G~--liV~~~~~~--~~~~~-------~~~~e~~l~l~d~~~~~~~~~~~~~~ 133 (491)
..++.......+ -... |.+.+.... +..+. ....+..+.|+.
T Consensus 256 l~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~L~~lp~~~~~~~~~~~~~l~~-------------- 321 (448)
T 3aw5_A 256 LKNTPFDPMHLEMGHGMQEALPEGSEYTIATFLVEGKGEAVPVEALSDPPPEPPKPTRTRRFALSL-------------- 321 (448)
T ss_dssp EEECCCCCCCCTTSSCCCCSSCTTSCEEEEEEEEEEECCCCCCCCCSCCCCCCCCCSEEEEEEEEE--------------
T ss_pred EEccccccccCccccccccccCCCCCceEEEEEEcCCCCCCCccccCCCCCCCCCCCceEEEEEeC--------------
Confidence 987743211000 1111 222221111 00000 001111111110
Q ss_pred cCCCCCCCceEEEcCcCCC--cceEE-EeCCCEEEEEEEEcCCCCeEeEEEeCceeEEEEecCccC------------CC
Q 011178 134 SGSDLPFPDGLVINGRGSN--ANTFT-VDQGKTYRFRISNVGISTSINFRIQGHKMLLVEVEGTHT------------LQ 198 (491)
Q Consensus 134 ~~~~~~~~~~~~vNG~~~~--~~~~~-v~~g~~~rlR~iN~~~~~~~~~~i~~~~~~via~DG~~~------------~p 198 (491)
+ ...++|||+.+. .+.+. ++.|++++|+|.|.+....+.||++||.|+|++.+|.+. .|
T Consensus 322 -~-----~~~~~iNg~~~~~~~p~~~~~~~g~~v~~~i~N~~~~~~HP~HLHG~~F~Vl~~~G~~~~~~~~~~~~~~~~p 395 (448)
T 3aw5_A 322 -S-----GMQWTINGMFWNASNPLFEHVSVEGVELWEIVNDKASMPHPMHLHGFPMWIIERKDSPRQVAELAVDNRGRLP 395 (448)
T ss_dssp -E-----TTEEEETTBCCCTTCTTCCCEEECEEEEEEEEECSSSCCEEEEESSSCBEEEEEESCCHHHHTTCCSTTCCCG
T ss_pred -C-----CceeeECCCcCCCCCCceeccCCCCeEEEEEEcCCCCCCcCEEECCceEEEEEecCCCcccccccccccCCCc
Confidence 0 124889999863 34567 899999999999998445899999999999999999764 23
Q ss_pred ---CccCeEEEcCCceEEEEEEeC---C-CCcceEEEEEe
Q 011178 199 ---NTYDSLDIHLGQSYSVLVRAD---Q-PPQGYYIVIST 231 (491)
Q Consensus 199 ---~~~~~l~l~pGeR~dv~v~~~---~-~~g~~~i~~~~ 231 (491)
...|++.+.||+++.|.+++. . .| |.+.++.
T Consensus 396 ~~~~~rDTv~v~pg~~~~i~vrF~~~~adnp--w~~HCHi 433 (448)
T 3aw5_A 396 TDLGLKDTVLIWPGETVKIVVNFDAKKRGQL--FPFHCHN 433 (448)
T ss_dssp GGGSCBSEEEECTTCEEEEEEEECGGGTTCE--EEEEESS
T ss_pred cccCCccEEEeCCCCEEEEEEEecccCCCCc--EEEEcCC
Confidence 367999999999999997664 2 33 5555553
No 80
>1b3i_A PETE protein, protein (plastocyanin); electron transport, type I copper protein, photosynthesis; NMR {Prochlorothrix hollandica} SCOP: b.6.1.1 PDB: 2b3i_A 2jxm_A*
Probab=98.56 E-value=8.3e-08 Score=77.12 Aligned_cols=77 Identities=13% Similarity=0.078 Sum_probs=58.5
Q ss_pred EEeecCCcEEEEEEEcCCCCCCceeccCCCeEEEeeccCCCCCCCCCCcccCCCCceeeEEeCCCCEEEEEEEccCccee
Q 011178 364 VMAADFRGFAEVVFENPEDTLQSWHIDGHNFFAVGMDGGEWTPASRLTYNLRDTISRCTVQVYPKSWTAVYVPLDNVGMW 443 (491)
Q Consensus 364 ~~~~~~g~~v~~~i~N~~~~~HP~HlHG~~F~Vl~~g~g~~~~~~~~~~~~~~p~~rDTv~v~p~~~~~irf~adnpG~w 443 (491)
.+.++.|++|.|+ |.+...|.+++++..+. .+ .. ...+++..+.||+...+.| +.||.|
T Consensus 20 ~i~v~~G~~V~~~--n~~~~~H~~~~~~~~~~-----~~------~~------~~~~~~~~~~~g~~~~~tf--~~~G~y 78 (97)
T 1b3i_A 20 ALSISAGDTVEFV--MNKVGPHNVIFDKVPAG-----ES------AP------ALSNTKLAIAPGSFYSVTL--GTPGTY 78 (97)
T ss_dssp EEEECTTCEEEEE--ECSSCCCCBEEEECCTT-----SC------HH------HHCBCCCCCSCSCCEEEEC--CSCSEE
T ss_pred EEEECCCCEEEEE--ECCCCCeEEEEeCCCCc-----cc------cc------cccccceecCCCCEEEEEe--CCCeEE
Confidence 3678999998886 66667899999865441 00 00 0014777888999888866 899999
Q ss_pred eeeecchhhhhcceEEEEEE
Q 011178 444 NIRSENWARQYLGQQFYLRV 463 (491)
Q Consensus 444 ~~HCHil~H~d~GMm~~~~V 463 (491)
.|||+ .|.++||...+.|
T Consensus 79 ~y~C~--~H~~~gM~G~i~V 96 (97)
T 1b3i_A 79 SFYCT--PHRGAGMVGTITV 96 (97)
T ss_dssp EEECS--STTTTTCEEEEEE
T ss_pred EEEcc--ChhhcCCEEEEEE
Confidence 99999 6999999999987
No 81
>1iby_A Nitrosocyanin; RED copper, cupredoxin, beta hairpin, metal binding protein; 1.65A {Nitrosomonas europaea} SCOP: b.6.1.4 PDB: 1ibz_A 1ic0_A
Probab=98.52 E-value=2.9e-07 Score=76.01 Aligned_cols=74 Identities=15% Similarity=0.145 Sum_probs=58.2
Q ss_pred EEeecCCcEEEEEEEcCCCCCCceeccCCCeEEEeeccCCCCCCCCCCcccCCCCceeeEEeCCCCEEEEEEEccCccee
Q 011178 364 VMAADFRGFAEVVFENPEDTLQSWHIDGHNFFAVGMDGGEWTPASRLTYNLRDTISRCTVQVYPKSWTAVYVPLDNVGMW 443 (491)
Q Consensus 364 ~~~~~~g~~v~~~i~N~~~~~HP~HlHG~~F~Vl~~g~g~~~~~~~~~~~~~~p~~rDTv~v~p~~~~~irf~adnpG~w 443 (491)
.+.++.|+.|.|++.|.+...|-|++... .-+..+.||+...+.|.++.||.|
T Consensus 39 ~i~v~~G~~V~~~~~n~d~~~H~~~i~~~---------------------------~~~~~i~pG~~~~~~f~~~~~G~y 91 (112)
T 1iby_A 39 TLVVKKGDAVKVVVENKSPISEGFSIDAF---------------------------GVQEVIKAGETKTISFTADKAGAF 91 (112)
T ss_dssp EEEEETTCEEEEEEEECSSSCEEEEEGGG---------------------------TEEEEECTTCEEEEEEECCSCEEE
T ss_pred EEEEeCCCEEEEEEEECCCCeEEEEEcCC---------------------------CceeEeCCCCEEEEEEECCCCEEE
Confidence 46789999999999999866555444311 125678999999999999999999
Q ss_pred eeeecchhhhhcceEEEEEEec
Q 011178 444 NIRSENWARQYLGQQFYLRVYS 465 (491)
Q Consensus 444 ~~HCHil~H~d~GMm~~~~V~~ 465 (491)
.||||+..|... |...+.|.+
T Consensus 92 ~~~C~~~~~~~~-M~g~i~V~~ 112 (112)
T 1iby_A 92 TIWCQLHPKNIH-LPGTLNVVE 112 (112)
T ss_dssp EEBCSSSCTTTB-CCEEEEEEC
T ss_pred EEECCCCCchHH-CEEEEEEeC
Confidence 999999766544 888888853
No 82
>4hci_A Cupredoxin 1; structural genomics, niaid, national institute of allergy AN infectious diseases; 1.63A {Bacillus anthracis} PDB: 4hcg_A 4hcf_A
Probab=98.51 E-value=9.4e-08 Score=77.32 Aligned_cols=66 Identities=15% Similarity=0.133 Sum_probs=50.1
Q ss_pred eeeEEEEEEecCCCCCeeeecccCCCCCCCCCCCCCCCCCCCCCCeEEEEEEeCCCccceeEeCCccccccCCceeEEEE
Q 011178 17 HLYTHLVVLNFIYMAPLITLNGVQQRRNSWQDGVYGTNCPIPPGKNFTYVLQVKDQIGSYFYFPSLAFHKAAGGYGGIKI 96 (491)
Q Consensus 17 ~d~v~i~~~N~l~~~~siH~HG~~~~~~~~~DG~~~~q~~i~PG~~~~Y~f~~~~~~Gt~wYH~H~~~q~~~Gl~G~liV 96 (491)
||+|++.++|.-..++++...+... ...+.||++.+|.|+. +++|+|.|+|..| ...||.|.|+|
T Consensus 35 G~tV~~~~~n~d~~~H~~~~~~~~~------------~~~~~pg~~~~~~~t~-~~~G~Y~y~C~~H--~~~gM~G~i~V 99 (100)
T 4hci_A 35 NESTTLLLKNKGKSEHTFTIKKLGI------------DVVVESGKEKNITVKP-KSAGTYELICRYH--LLKGMEGKVIV 99 (100)
T ss_dssp TSCEEEEEEECSSSCEEEEEGGGTE------------EEEECTTCEEEEEECC-CSCEEEEEECTTT--GGGTCEEEEEE
T ss_pred CCEEEEEEEcCCCceEEEEEecCCc------------ceeecCCcceeEEEec-ccCceEEEECccc--cCCCCEEEEEE
Confidence 4666777999866666665555421 1237899999999998 6899999999754 45799999999
Q ss_pred e
Q 011178 97 A 97 (491)
Q Consensus 97 ~ 97 (491)
+
T Consensus 100 e 100 (100)
T 4hci_A 100 K 100 (100)
T ss_dssp C
T ss_pred C
Confidence 6
No 83
>2plt_A Plastocyanin; electron transport; 1.50A {Chlamydomonas reinhardtii} SCOP: b.6.1.1
Probab=98.50 E-value=6.7e-08 Score=77.81 Aligned_cols=67 Identities=19% Similarity=0.261 Sum_probs=47.1
Q ss_pred EEecCCCCCeeeecccCCCCCCCCCCC--CCCCCCCCCCCeEEEEEEeCCCccceeEeCCccccccCCceeEEEEe
Q 011178 24 VLNFIYMAPLITLNGVQQRRNSWQDGV--YGTNCPIPPGKNFTYVLQVKDQIGSYFYFPSLAFHKAAGGYGGIKIA 97 (491)
Q Consensus 24 ~~N~l~~~~siH~HG~~~~~~~~~DG~--~~~q~~i~PG~~~~Y~f~~~~~~Gt~wYH~H~~~q~~~Gl~G~liV~ 97 (491)
++|.-..++++|+|+...+.. .|.. ......+.||+++++.|+ ++|+|+|||+. +...||.|.|+|+
T Consensus 30 ~~n~~~~~H~~~~~~~~~p~~--~~~~~~~~~~~~~~pG~~~~~tf~---~~G~y~y~C~~--H~~~gM~G~i~V~ 98 (98)
T 2plt_A 30 FVNNAGFPHNIVFDEDAIPSG--VNADAISRDDYLNAPGETYSVKLT---AAGEYGYYCEP--HQGAGMVGKIIVQ 98 (98)
T ss_dssp EEECSSCCEEEEECGGGSCTT--CCHHHHCEEEEECSTTCEEEEECC---SCEEEEEECGG--GGGGTCEEEEEEC
T ss_pred EEECCCCceEEEEeCCCCCCc--cccccccccceecCCCCEEEEEeC---CCeEEEEEcCC--ccccCCeEEEEEC
Confidence 578877789999998643211 1110 011234789999999874 79999999993 4556999999984
No 84
>1qhq_A Protein (auracyanin); electron transfer, cupredoxin, blue copper protein, azurin-L thermophIle; 1.55A {Chloroflexus aurantiacus} SCOP: b.6.1.1 PDB: 1ov8_A
Probab=98.49 E-value=4.3e-07 Score=78.24 Aligned_cols=86 Identities=16% Similarity=0.185 Sum_probs=59.3
Q ss_pred CeEEE--eeeEEEEEEe--cCCCCCeeeecccC------------CC-CCCC---CC--CCCCCCCCCCCCCeEEEEEEe
Q 011178 12 CSLIT--HLYTHLVVLN--FIYMAPLITLNGVQ------------QR-RNSW---QD--GVYGTNCPIPPGKNFTYVLQV 69 (491)
Q Consensus 12 ~~l~v--~d~v~i~~~N--~l~~~~siH~HG~~------------~~-~~~~---~D--G~~~~q~~i~PG~~~~Y~f~~ 69 (491)
++|+| |++|+++++| ....+++++.+... .. ...+ .| .+......|.||++.++.|++
T Consensus 33 ~~i~v~~G~tV~~~~~N~~~~~~~H~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~l~pG~~~~~~~~~ 112 (140)
T 1qhq_A 33 TSLSLPANTVVRLDFVNQNNLGVQHNWVLVNGGDDVAAAVNTAAQNNADALFVPPPDTPNALAWTAMLNAGESGSVTFRT 112 (140)
T ss_dssp SEEEEETTCEEEEEEEECCSSCCCBCCEEESSSHHHHHHHHHHHHTCGGGTTCCCTTCTTEEEECCCBCTTEEEEEEEEC
T ss_pred CeEEECCCCEEEEEEECCCCCCCceeEEEeccCcchhhhhhhhhhhcccccccCccccccccccceeeCCCceeEEEEEe
Confidence 34444 5778888999 66677888877320 00 0000 01 111112458999999999999
Q ss_pred CCCccceeEeCCccccccCCceeEEEEec
Q 011178 70 KDQIGSYFYFPSLAFHKAAGGYGGIKIAS 98 (491)
Q Consensus 70 ~~~~Gt~wYH~H~~~q~~~Gl~G~liV~~ 98 (491)
+.+|+|||||+...+...||.|.|+|.+
T Consensus 113 -~~~G~y~f~C~~~~H~~~GM~g~i~V~p 140 (140)
T 1qhq_A 113 -PAPGTYLYICTFPGHYLAGMKGTLTVTP 140 (140)
T ss_dssp -CSSEEEEEECCSTTTTTTTCEEEEEEEC
T ss_pred -CCCeeEEEEeCCcCHhhcCCEEEEEEcC
Confidence 5899999999987778889999999974
No 85
>3abg_A Bilirubin oxidase; cleavage on PAIR of basic residues, glyco metal-binding, oxidoreductase; HET: NAG BMA NDG; 2.30A {Myrothecium verrucaria} PDB: 2xll_A*
Probab=98.46 E-value=3.3e-06 Score=88.85 Aligned_cols=205 Identities=12% Similarity=0.016 Sum_probs=120.4
Q ss_pred eeEEEEEEecCCC-CCeeeecc---------cCCCCCCCCCCCC----C--CCCCCCCCCeEEEEEEeCCCcc-ceeEeC
Q 011178 18 LYTHLVVLNFIYM-APLITLNG---------VQQRRNSWQDGVY----G--TNCPIPPGKNFTYVLQVKDQIG-SYFYFP 80 (491)
Q Consensus 18 d~v~i~~~N~l~~-~~siH~HG---------~~~~~~~~~DG~~----~--~q~~i~PG~~~~Y~f~~~~~~G-t~wYH~ 80 (491)
.++++||.|.... ...++++| +.+. ..||.. . ....|.|||+++..+++++.+| +||..+
T Consensus 219 ~~~RlRliNa~~~~~~~l~i~~~~~~~~~h~~~vI---a~DG~~~~~P~~~~~l~l~pgeR~dvlv~~~~~~g~~~~l~~ 295 (534)
T 3abg_A 219 RKYRFRFLDAAVSRSFGLYFADTDAIDTRLPFKVI---ASDSGLLEHPADTSLLYISMAERYEVVFDFSDYAGKTIELRN 295 (534)
T ss_dssp SEEEEEEEECCSSCCEEEEECCSSSTTCCCCEEEE---EETTEEEEEEEEESCEEECTTCEEEEEEECSSCTTSEEEEEC
T ss_pred cEEEEEEEecCCcceEEEEEecccCcCCCccEEEE---EeCCCcccCceEeceEEECCccEEEEEEEcCCCCCceEEEEe
Confidence 3689999999764 45788876 2222 268752 2 3456999999999999965478 688765
Q ss_pred Ccccccc-------CCceeEEEEecCCCCCCCCCCCCCcceEEeeecc-cCCHHHHHHHHhcCCCCCCCceEEEcCcCCC
Q 011178 81 SLAFHKA-------AGGYGGIKIASRPLIPVPFDPPAGDFTILAGDWY-KKNHTDLKAILDSGSDLPFPDGLVINGRGSN 152 (491)
Q Consensus 81 H~~~q~~-------~Gl~G~liV~~~~~~~~~~~~~~~e~~l~l~d~~-~~~~~~~~~~~~~~~~~~~~~~~~vNG~~~~ 152 (491)
....... ....+.+-+........+- ....+..|.... ..........+.-+ .....++|||+.+.
T Consensus 296 ~~~~~~~~~~~~~~~~~~~il~~~~~~~~~~~~---~~~~P~~L~~~~~p~~~~~~~~~~~~~---~~~~~w~iNG~~f~ 369 (534)
T 3abg_A 296 LGGSIGGIGTDTDYDNTDKVMRFVVADDTTQPD---TSVVPANLRDVPFPSPTTNTPRQFRFG---RTGPTWTINGVAFA 369 (534)
T ss_dssp CCCSSSSCCSCSSSTTTSEEEEEECCCCSSCSC---CCCCCCCCCCCSCCCCCCCCCEEEECS---CCCSTTCCCCBTTB
T ss_pred ccccccccccccCcCCcceeEEEecCCCCcCCC---CCCCccccccCCCCCCccccceEEEEe---ccCceeEECCcccC
Confidence 3210000 0011222222111100000 000000000000 00000000000000 01124678998862
Q ss_pred c---c-eEEEeCCCEEEEEEEEcCCCCeEeEEEeCceeEEEEe-cCcc---CCC---CccCeEEEcCCceEEEEEE-eCC
Q 011178 153 A---N-TFTVDQGKTYRFRISNVGISTSINFRIQGHKMLLVEV-EGTH---TLQ---NTYDSLDIHLGQSYSVLVR-ADQ 220 (491)
Q Consensus 153 ~---~-~~~v~~g~~~rlR~iN~~~~~~~~~~i~~~~~~via~-DG~~---~~p---~~~~~l~l~pGeR~dv~v~-~~~ 220 (491)
. + .+.++.|++++|.|.|.+....+.||||||.|+|++. +|.. ..+ ...|++.+.||+++.|.+. ++
T Consensus 370 ~~~~p~l~~v~~G~~~~w~i~N~~~~~~HP~HLHG~~F~Vl~~~~g~~~~~~~~~~~~~rDTV~v~pg~~v~I~~~~ad- 448 (534)
T 3abg_A 370 DVQNRLLANVPVGTVERWELINAGNGWTHPIHIHLVDFKVISRTSGNNARTVMPYESGLKDVVWLGRRETVVVEAHYAP- 448 (534)
T ss_dssp CTTSCCCCEECTTCEEEEEEEECSSSCCCCEEESSCCEEEEEESSCCSSSCCCSGGGSCBSEECCCSSEEEEEEEECCS-
T ss_pred CCCCcceeeccCCCEEEEEEEcCCCCCCcCEEECCeeEEEEEEcCCCCcCcCCccccCCcCeEEcCCCCEEEEEEEECC-
Confidence 1 2 4679999999999999986568999999999999998 6631 112 3469999999999999998 55
Q ss_pred CCcceEEEEEee
Q 011178 221 PPQGYYIVISTR 232 (491)
Q Consensus 221 ~~g~~~i~~~~~ 232 (491)
.+|.|.+.++..
T Consensus 449 npG~w~~HCHil 460 (534)
T 3abg_A 449 FPGVYMFHCHNL 460 (534)
T ss_dssp CCEEEEEEESCH
T ss_pred CCccEEEecChH
Confidence 789998888764
No 86
>1byp_A Protein (plastocyanin); electron transfer, photosynthesis, acidic patch, double mutant, electron transport; 1.75A {Silene latifolia subsp} SCOP: b.6.1.1 PDB: 1pla_A 1plb_A
Probab=98.46 E-value=5.9e-07 Score=72.35 Aligned_cols=82 Identities=11% Similarity=0.019 Sum_probs=59.7
Q ss_pred eEEeecCCcEEEEEEEcCCCCCCceeccCCCeEEEeeccCCCCCCCCCCcccCCCCceeeEEeCCCCEEEEEEEccCcce
Q 011178 363 SVMAADFRGFAEVVFENPEDTLQSWHIDGHNFFAVGMDGGEWTPASRLTYNLRDTISRCTVQVYPKSWTAVYVPLDNVGM 442 (491)
Q Consensus 363 ~~~~~~~g~~v~~~i~N~~~~~HP~HlHG~~F~Vl~~g~g~~~~~~~~~~~~~~p~~rDTv~v~p~~~~~irf~adnpG~ 442 (491)
..+.++.|++|.| .|.+...|.+|+++..|. .+ ++. ... ...+|++.+.||+...+.| +.||.
T Consensus 17 ~~i~v~~G~tV~~--~n~~~~~H~~~~~~~~~p-----~g-~~~-----~~~--~~~~~~~~~~~G~~~~~~f--~~~G~ 79 (99)
T 1byp_A 17 SDLSIASGEKITF--KNNAGFPHNDLFDKKEVP-----AG-VDV-----TKI--SMPEEDLLNAPGEEYSVTL--TEKGT 79 (99)
T ss_dssp SEEEECTTEEEEE--EECSSCCBCCEECTTSSC-----TT-CCH-----HHH--SCCTTCCBCSTTCEEEEEE--CSCEE
T ss_pred CEEEECCCCEEEE--EECCCCcceEEEeCCCCc-----cc-ccc-----ccc--cccccceeeCCCCEEEEEe--CCCcE
Confidence 3468899999887 577777899999975441 01 000 000 0125667888999888876 58999
Q ss_pred eeeeecchhhhhcceEEEEEE
Q 011178 443 WNIRSENWARQYLGQQFYLRV 463 (491)
Q Consensus 443 w~~HCHil~H~d~GMm~~~~V 463 (491)
|.|||+ .|.++||...+.|
T Consensus 80 y~~~C~--~H~~~gM~G~i~V 98 (99)
T 1byp_A 80 YKFYCA--PHAGAGMVGKVTV 98 (99)
T ss_dssp EEEECG--GGTTTTCEEEEEE
T ss_pred EEEEcC--CccccCCEEEEEE
Confidence 999999 5999999999987
No 87
>2wsd_A Spore coat protein A; oxidoreductase, multi-copper oxidase, sporulation, COTA- LAC copper centre; 1.60A {Bacillus subtilis} PDB: 1gsk_A 1hkp_A 1hkz_A 1hl0_A 1hl1_A 1of0_A* 1ogr_A 1uvw_A* 1w6l_A 1w6w_A 1w8e_A 2bhf_A 2x87_A 2x88_A* 4a67_A 4akq_A 4a68_A* 4akp_A* 4a66_A 4ako_A
Probab=98.45 E-value=1.8e-06 Score=90.67 Aligned_cols=235 Identities=14% Similarity=0.084 Sum_probs=132.0
Q ss_pred CceEEEcCcCCCcceEEEeCCCEEEEEEEEcCCCC---------------------eEeEEEeCceeEEEEecCccCCCC
Q 011178 141 PDGLVINGRGSNANTFTVDQGKTYRFRISNVGIST---------------------SINFRIQGHKMLLVEVEGTHTLQN 199 (491)
Q Consensus 141 ~~~~~vNG~~~~~~~~~v~~g~~~rlR~iN~~~~~---------------------~~~~~i~~~~~~via~DG~~~~p~ 199 (491)
-..+++||+.. .|+|++++|+++++++.|.-... ...+|.+|.... -+.||.+-.+.
T Consensus 46 ~~~~~~NG~~P-GPtI~~~~Gd~v~v~v~N~L~~~~~~~~~~t~~~~~~~~~~~~~~tsiHwHGl~~~-~~~DG~p~~~i 123 (513)
T 2wsd_A 46 TRLWGYNGLFP-GPTIEVKRNENVYVKWMNNLPSTHFLPIDHTIHHSDSQHEEPEVKTVVHLHGGVTP-DDSDGYPEAWF 123 (513)
T ss_dssp EEEEEETTBSS-CCBEEEETTCCEEEEEEECCCSSCSSCCCTTSCC-----CCCSCCBCEEEETCCCC-GGGSCCTTSCB
T ss_pred ceEEEECCCcc-CceEEECCCCEEEEEEEeCCCccccCccccccccccccccCCCCCcEEEcCCCcCC-CccCCCCcccc
Confidence 35789999864 79999999999999999998541 566788776433 24588753211
Q ss_pred ccCeEEEcCC---ceEEEEEEeCCCCcceEEEEEeecc--CC-CcceEEEEEecCCCCCCCCCCCCCCCccc-----cch
Q 011178 200 TYDSLDIHLG---QSYSVLVRADQPPQGYYIVISTRFT--SQ-VLSATSVLHYSNSAGSVSGPPPGGPTTQI-----DWS 268 (491)
Q Consensus 200 ~~~~l~l~pG---eR~dv~v~~~~~~g~~~i~~~~~~~--~~-~~~~~ail~y~~~~~~~~~~~p~~p~~~~-----~~~ 268 (491)
..=.|.|| +++...+++++.+|+||...+.... .+ .....|.|...+... ....+|. ...+. ||.
T Consensus 124 --~~g~i~pG~~f~~~~Y~f~~~~~~GT~wYH~H~~~~t~~q~~~Gl~G~liV~~~~~-~~~~lp~-~d~d~~l~l~D~~ 199 (513)
T 2wsd_A 124 --SKDFEQTGPYFKREVYHYPNQQRGAILWYHDHAMALTRLNVYAGLVGAYIIHDPKE-KRLKLPS-DEYDVPLLITDRT 199 (513)
T ss_dssp --CGGGSSBCTTCCCSEEEECCCSCCEEEEEEECCTTTHHHHHHHTCEEEEEEECGGG-GGGCCCC-GGGEEEEEEEEEE
T ss_pred --cCCcccCCCccceEEEEEecCCCccceEECCCCCCcchhhhhccCeEEEEEecccc-ccccCCC-CCCcEEEEEEeee
Confidence 11134567 5558888887678999998876321 01 112344444333211 0111111 00111 111
Q ss_pred hhhhhhhccCCCCCCCCCCCCCCCCccccccceEEEEeccccCcCCeEeEEEcCeeeeCCCCccccccccCCCCccccCC
Q 011178 269 LEQARSLRRNLTASGPRPNPQGSYHYGLINTTHTIRLQNTAPTINGKQRYAVNSVSFIPADTPLKLADYFKIPGVFSVGS 348 (491)
Q Consensus 269 ~~~~~~~~~~l~~~~~~~~p~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~iNg~~f~~~~~p~~~~~~~~~~~~~~~~~ 348 (491)
......+..... . ..+..... ............+.|||+.+ |
T Consensus 200 ~~~~~~~~~~~~---~-~~~~~~~~------------~~~~~~~~~~d~~liNG~~~-----p----------------- 241 (513)
T 2wsd_A 200 INEDGSLFYPSA---P-ENPSPSLP------------NPSIVPAFCGETILVNGKVW-----P----------------- 241 (513)
T ss_dssp ECTTSCEECCSS---C-SSCCTTSC------------SSCCCSCCCCSEEEETTEES-----C-----------------
T ss_pred cCCCCceecccc---c-cccccccc------------ccccccccccceEEECCccc-----c-----------------
Confidence 110000000000 0 00000000 00000000113456777654 1
Q ss_pred CCCCCCCCCcceeeeEEeecCCcEEEEEEEcCCCC-CCceeccCC-CeEEEeeccCCCCCCCCCCcccCCCCceeeEEeC
Q 011178 349 IPDNPTGGGAYLQTSVMAADFRGFAEVVFENPEDT-LQSWHIDGH-NFFAVGMDGGEWTPASRLTYNLRDTISRCTVQVY 426 (491)
Q Consensus 349 ~~~~p~~~~~~~~~~~~~~~~g~~v~~~i~N~~~~-~HP~HlHG~-~F~Vl~~g~g~~~~~~~~~~~~~~p~~rDTv~v~ 426 (491)
.+.++. ++++|+|.|.+.. .+-|||.|| .|.|++..++. +..|...|++.|.
T Consensus 242 ---------------~~~v~~-~~~RlRliNa~~~~~~~~~i~~~~~~~via~DG~~----------~~~P~~~~~l~l~ 295 (513)
T 2wsd_A 242 ---------------YLEVEP-RKYRFRVINASNTRTYNLSLDNGGDFIQIGSDGGL----------LPRSVKLNSFSLA 295 (513)
T ss_dssp ---------------EEECCS-SEEEEEEEECCSSCCEEEEETTCCCEEEEEETTEE----------EEEEEEESEEEEC
T ss_pred ---------------eEEecC-CEEEEEEEccCCcceEEEEECCCCeEEEEccCCCc----------ccCceEeCeEEEC
Confidence 134454 4799999999865 489999999 99999996431 1235567999999
Q ss_pred CCCEEEEEEEccC-cceeee
Q 011178 427 PKSWTAVYVPLDN-VGMWNI 445 (491)
Q Consensus 427 p~~~~~irf~adn-pG~w~~ 445 (491)
+|+.+.|.+.++. +|.|+.
T Consensus 296 pgeR~dvlv~~~~~~g~~~~ 315 (513)
T 2wsd_A 296 PAERYDIIIDFTAYEGESII 315 (513)
T ss_dssp TTCEEEEEEECGGGTTCEEE
T ss_pred CeeeEEEEEECCCCCCcEEE
Confidence 9999999999865 788654
No 88
>1pcs_A Plastocyanin; electron transport; 2.15A {Synechocystis SP} SCOP: b.6.1.1 PDB: 1m9w_A 1j5c_A 1j5d_A 1jxd_A 1jxf_A
Probab=98.44 E-value=7.1e-08 Score=77.67 Aligned_cols=68 Identities=18% Similarity=0.243 Sum_probs=45.8
Q ss_pred EEecCCCCCeeeecccCCCCCCCCCCCCCCCCCCCCCCeEEEEEEeCCCccceeEeCCccccccCCceeEEEEe
Q 011178 24 VLNFIYMAPLITLNGVQQRRNSWQDGVYGTNCPIPPGKNFTYVLQVKDQIGSYFYFPSLAFHKAAGGYGGIKIA 97 (491)
Q Consensus 24 ~~N~l~~~~siH~HG~~~~~~~~~DG~~~~q~~i~PG~~~~Y~f~~~~~~Gt~wYH~H~~~q~~~Gl~G~liV~ 97 (491)
++|.-..++++|.++...++. ..++.......+.||+++++.| +++|+|+|||+ .+...||.|.|+|+
T Consensus 31 ~~n~~~~~H~~~~~~~~~pg~-~~~~~~~~~~~~~pG~~~~~tf---~~~G~y~~~C~--~H~~~gM~G~i~V~ 98 (98)
T 1pcs_A 31 WVNNKLSPHNIVFDADGVPAD-TAAKLSHKGLLFAAGESFTSTF---TEPGTYTYYCE--PHRGAGMVGKVVVE 98 (98)
T ss_dssp EEECSSCCEEEEECCSSSCHH-HHHHHCEEEEECSTTCEEEEEC---CSCEEEEEECG--GGTTTTCEEEEEEC
T ss_pred EEECCCCCcEEEEeCCCCCcc-ccccccccccccCCCCEEEEEc---CCCeEEEEEcC--CccccCCeEEEEEC
Confidence 557766778888887532100 0000001123478999999988 47999999999 45567999999985
No 89
>1bxv_A Plastocyanin; copper protein, electron transfer; 1.80A {Synechococcus elongatus} SCOP: b.6.1.1 PDB: 1bxu_A
Probab=98.42 E-value=2.9e-07 Score=72.86 Aligned_cols=66 Identities=18% Similarity=0.304 Sum_probs=45.6
Q ss_pred eeeEEEEEEecCCCCCeeeecccCCCCCCCCCCCCCCCCCCCCCCeEEEEEEeCCCccceeEeCCccccccCCceeEEEE
Q 011178 17 HLYTHLVVLNFIYMAPLITLNGVQQRRNSWQDGVYGTNCPIPPGKNFTYVLQVKDQIGSYFYFPSLAFHKAAGGYGGIKI 96 (491)
Q Consensus 17 ~d~v~i~~~N~l~~~~siH~HG~~~~~~~~~DG~~~~q~~i~PG~~~~Y~f~~~~~~Gt~wYH~H~~~q~~~Gl~G~liV 96 (491)
||+|+ ++|.-..+++++.++.. ++. .....+.||+++++.| +++|+|||||+.+ ...||.|.|+|
T Consensus 26 Gd~V~--~~n~~~~~H~v~~~~~~----~~~----~~~~~~~~g~~~~~~f---~~~G~y~~~C~~H--~~~gM~g~i~V 90 (91)
T 1bxv_A 26 GDTVQ--WVNNKLAPHNVVVEGQP----ELS----HKDLAFSPGETFEATF---SEPGTYTYYCEPH--RGAGMVGKIVV 90 (91)
T ss_dssp TCEEE--EEECSSCCEEEEETTCG----GGC----EEEEECSTTCEEEEEC---CSCEEEEEECTTT--GGGTCEEEEEE
T ss_pred CCEEE--EEECCCCCcEEEEeCCC----ccC----cccceeCCCCEEEEEe---CCCEEEEEEeCCC--ccCCCEEEEEE
Confidence 45443 55776677888887621 110 1123478999998877 4799999999943 44599999998
Q ss_pred e
Q 011178 97 A 97 (491)
Q Consensus 97 ~ 97 (491)
+
T Consensus 91 ~ 91 (91)
T 1bxv_A 91 Q 91 (91)
T ss_dssp C
T ss_pred C
Confidence 5
No 90
>4hci_A Cupredoxin 1; structural genomics, niaid, national institute of allergy AN infectious diseases; 1.63A {Bacillus anthracis} PDB: 4hcg_A 4hcf_A
Probab=98.41 E-value=8.7e-07 Score=71.54 Aligned_cols=72 Identities=13% Similarity=0.128 Sum_probs=59.2
Q ss_pred EEeecCCcEEEEEEEcCCCCCCceeccCCCeEEEeeccCCCCCCCCCCcccCCCCceeeEEeCCCCEEEEEEEccCccee
Q 011178 364 VMAADFRGFAEVVFENPEDTLQSWHIDGHNFFAVGMDGGEWTPASRLTYNLRDTISRCTVQVYPKSWTAVYVPLDNVGMW 443 (491)
Q Consensus 364 ~~~~~~g~~v~~~i~N~~~~~HP~HlHG~~F~Vl~~g~g~~~~~~~~~~~~~~p~~rDTv~v~p~~~~~irf~adnpG~w 443 (491)
.+.++.|+.|.|++.|.+...|-|.+.+.. -...+.||....+.|.++.||.|
T Consensus 29 ~i~v~~G~tV~~~~~n~d~~~H~~~~~~~~---------------------------~~~~~~pg~~~~~~~t~~~~G~Y 81 (100)
T 4hci_A 29 VITIPINESTTLLLKNKGKSEHTFTIKKLG---------------------------IDVVVESGKEKNITVKPKSAGTY 81 (100)
T ss_dssp EEEECTTSCEEEEEEECSSSCEEEEEGGGT---------------------------EEEEECTTCEEEEEECCCSCEEE
T ss_pred EEEECCCCEEEEEEEcCCCceEEEEEecCC---------------------------cceeecCCcceeEEEecccCceE
Confidence 367899999999999998777777664322 12346789999999999999999
Q ss_pred eeeecchhhhhcceEEEEEEe
Q 011178 444 NIRSENWARQYLGQQFYLRVY 464 (491)
Q Consensus 444 ~~HCHil~H~d~GMm~~~~V~ 464 (491)
.|+|.. |...||...+.|.
T Consensus 82 ~y~C~~--H~~~gM~G~i~Ve 100 (100)
T 4hci_A 82 ELICRY--HLLKGMEGKVIVK 100 (100)
T ss_dssp EEECTT--TGGGTCEEEEEEC
T ss_pred EEECcc--ccCCCCEEEEEEC
Confidence 999985 9999999999873
No 91
>1kdj_A Plastocyanin; electron transfer, photosystem, PAI-PAI stacking; 1.70A {Adiantum capillus-veneris} SCOP: b.6.1.1 PDB: 1kdi_A 2bz7_A 2bzc_A
Probab=98.35 E-value=7e-07 Score=72.33 Aligned_cols=84 Identities=10% Similarity=-0.048 Sum_probs=58.1
Q ss_pred eEEeecCCcEEEEEEEcCCCCCCceeccCCCeEEEeeccCCCCCCCCCCcccCCCCc-eeeEEeCCCCEEEEEEEccCcc
Q 011178 363 SVMAADFRGFAEVVFENPEDTLQSWHIDGHNFFAVGMDGGEWTPASRLTYNLRDTIS-RCTVQVYPKSWTAVYVPLDNVG 441 (491)
Q Consensus 363 ~~~~~~~g~~v~~~i~N~~~~~HP~HlHG~~F~Vl~~g~g~~~~~~~~~~~~~~p~~-rDTv~v~p~~~~~irf~adnpG 441 (491)
..++++.|++|.|+ |.+...|.++++.-... .+.+... . ..+.+ .+++.+.||+...+.| +.||
T Consensus 17 ~~i~v~~G~tV~~~--n~~~~~H~~~~~~~~~~-----~~~~~~~-----~-~~~~~~~~~~~~~pG~~~~~tf--~~~G 81 (102)
T 1kdj_A 17 DSITVSAGEAVEFT--LVGETGHNIVFDIPAGA-----PGTVASE-----L-KAASMDENDLLSEDEPSFKAKV--STPG 81 (102)
T ss_dssp SEEEECTTCCEEEE--ECSSSCBCCEECCCTTC-----CHHHHHH-----H-HHTSCCTTCCBBTTBCEEEECC--CSCE
T ss_pred CEEEECCCCEEEEE--ECCCCCeEEEEeCcccc-----cccccch-----h-hcccccccceecCCCCEEEEEe--CCCe
Confidence 34788999999876 77767899998731100 0000000 0 00112 3677788999888866 8999
Q ss_pred eeeeeecchhhhhcceEEEEEE
Q 011178 442 MWNIRSENWARQYLGQQFYLRV 463 (491)
Q Consensus 442 ~w~~HCHil~H~d~GMm~~~~V 463 (491)
.|.|||+ .|.++||...+.|
T Consensus 82 ~y~y~C~--~H~~~gM~G~i~V 101 (102)
T 1kdj_A 82 TYTFYCT--PHKSANMKGTLTV 101 (102)
T ss_dssp EEEEECS--TTGGGTCEEEEEE
T ss_pred EEEEEeC--CCcccCCeEEEEE
Confidence 9999999 6999999999987
No 92
>3erx_A Pseudoazurin; copper protein, high-resolution, E transport, metal-binding, transport; 1.25A {Paracoccus pantotrophus} SCOP: b.6.1.1 PDB: 1adw_A
Probab=98.35 E-value=7.9e-07 Score=74.47 Aligned_cols=38 Identities=16% Similarity=0.174 Sum_probs=32.2
Q ss_pred CCCCCeEEEEEEeCCCccceeEeCCccccccCCceeEEEEecC
Q 011178 57 IPPGKNFTYVLQVKDQIGSYFYFPSLAFHKAAGGYGGIKIASR 99 (491)
Q Consensus 57 i~PG~~~~Y~f~~~~~~Gt~wYH~H~~~q~~~Gl~G~liV~~~ 99 (491)
+.||++|+|.| +.+|+|||+|-. +...||.|.|+|.++
T Consensus 58 ~~pg~t~s~TF---~~pG~y~y~C~~--H~~~GM~G~I~V~~~ 95 (123)
T 3erx_A 58 SKINESYTLTV---TEPGLYGVKCTP--HFGMGMVGLVQVGDA 95 (123)
T ss_dssp CCTTCCEEEEE---CSCEEEEEECGG--GTTTTCEEEEEESSS
T ss_pred cCCCCEEEEEe---CCCeEEEEEeCC--CCcCCcEEEEEECCC
Confidence 57999998888 479999999984 456799999999873
No 93
>1b3i_A PETE protein, protein (plastocyanin); electron transport, type I copper protein, photosynthesis; NMR {Prochlorothrix hollandica} SCOP: b.6.1.1 PDB: 2b3i_A 2jxm_A*
Probab=98.34 E-value=5.4e-07 Score=72.28 Aligned_cols=65 Identities=20% Similarity=0.315 Sum_probs=45.9
Q ss_pred EEEecCCCCCeeeecccCCCCCCCCCCCC---CCCCCCCCCCeEEEEEEeCCCccceeEeCCccccccCCceeEEEEe
Q 011178 23 VVLNFIYMAPLITLNGVQQRRNSWQDGVY---GTNCPIPPGKNFTYVLQVKDQIGSYFYFPSLAFHKAAGGYGGIKIA 97 (491)
Q Consensus 23 ~~~N~l~~~~siH~HG~~~~~~~~~DG~~---~~q~~i~PG~~~~Y~f~~~~~~Gt~wYH~H~~~q~~~Gl~G~liV~ 97 (491)
+++|.-..+++++.++... .+|.. .....+.||+++++.| +++|+|+|||+ .+...||.|.|+|+
T Consensus 30 ~~~n~~~~~H~~~~~~~~~-----~~~~~~~~~~~~~~~~g~~~~~tf---~~~G~y~y~C~--~H~~~gM~G~i~V~ 97 (97)
T 1b3i_A 30 EFVMNKVGPHNVIFDKVPA-----GESAPALSNTKLAIAPGSFYSVTL---GTPGTYSFYCT--PHRGAGMVGTITVE 97 (97)
T ss_dssp EEEECSSCCCCBEEEECCT-----TSCHHHHCBCCCCCSCSCCEEEEC---CSCSEEEEECS--STTTTTCEEEEEEC
T ss_pred EEEECCCCCeEEEEeCCCC-----ccccccccccceecCCCCEEEEEe---CCCeEEEEEcc--ChhhcCCEEEEEEC
Confidence 4668755678888887542 11211 1123478999999887 47999999999 44556999999985
No 94
>3od3_A Blue copper oxidase CUEO; multicopper oxidase, Cu(I) oxidase, oxidoreductase; 1.10A {Escherichia coli} PDB: 1n68_A 2fqd_A* 2fqe_A* 2fqf_A* 2fqg_A* 3nsd_A 1kv7_A 3pau_A 3pav_A 3nsf_A 1pf3_A 3qqx_A 3nsc_A 3nt0_A 3uad_A 3uaa_A 3uac_A 3uab_A 3uae_A 3nsy_A ...
Probab=98.34 E-value=1.2e-06 Score=90.79 Aligned_cols=89 Identities=22% Similarity=0.334 Sum_probs=74.6
Q ss_pred eEEEcCcCCC--cceEEEeCCCEEEEEEEEcCCCCeEeEEEeCceeEEEEecCccCCC---CccCeEEEcCCceEEEEEE
Q 011178 143 GLVINGRGSN--ANTFTVDQGKTYRFRISNVGISTSINFRIQGHKMLLVEVEGTHTLQ---NTYDSLDIHLGQSYSVLVR 217 (491)
Q Consensus 143 ~~~vNG~~~~--~~~~~v~~g~~~rlR~iN~~~~~~~~~~i~~~~~~via~DG~~~~p---~~~~~l~l~pGeR~dv~v~ 217 (491)
.++|||+.++ .+.++++.|+++||+|+|.+....+.|||+++.|+|++.||....+ ...|++.|. |+++.|+++
T Consensus 379 ~~~ING~~~~~~~~~~~~~~G~~e~w~l~N~~~~~~Hp~HlHg~~F~Vl~~~g~~~~~~~~~~kDTV~v~-g~~~~i~~~ 457 (488)
T 3od3_A 379 ANKINGQAFDMNKPMFAAAKGQYERWVISGVGDMMLHPFHIHGTQFRILSENGKPPAAHRAGWKDTVKVE-GNVSEVLVK 457 (488)
T ss_dssp CEEETTBCCCTTCCSEECCBSSCEEEEEECTTCCCCEEEEETTCCBEEEEBTTBCCCGGGSSSBSEEEES-SSEEEEEEC
T ss_pred eeeECCeeCCCCCCceEcCCCCEEEEEEEeCCCCCCccEEEcCceEEEeccCCCccccccCCceeEEEeC-CCEEEEEEE
Confidence 3799999863 4668999999999999999866689999999999999999987644 357999999 999999999
Q ss_pred eCC---CCcceEEEEEee
Q 011178 218 ADQ---PPQGYYIVISTR 232 (491)
Q Consensus 218 ~~~---~~g~~~i~~~~~ 232 (491)
+++ .+|.|-+.++..
T Consensus 458 f~~~~~~~G~~m~HCH~l 475 (488)
T 3od3_A 458 FNHDAPKEHAYMAHCHLL 475 (488)
T ss_dssp BCSCCCGGGCEEEEESSH
T ss_pred eccCCCCCCCEEEeCCch
Confidence 974 246777776643
No 95
>1kdj_A Plastocyanin; electron transfer, photosystem, PAI-PAI stacking; 1.70A {Adiantum capillus-veneris} SCOP: b.6.1.1 PDB: 1kdi_A 2bz7_A 2bzc_A
Probab=98.32 E-value=8.8e-07 Score=71.73 Aligned_cols=37 Identities=19% Similarity=0.309 Sum_probs=31.8
Q ss_pred CCCCCCeEEEEEEeCCCccceeEeCCccccccCCceeEEEEe
Q 011178 56 PIPPGKNFTYVLQVKDQIGSYFYFPSLAFHKAAGGYGGIKIA 97 (491)
Q Consensus 56 ~i~PG~~~~Y~f~~~~~~Gt~wYH~H~~~q~~~Gl~G~liV~ 97 (491)
.+.||+++++.| +++|+|+|||+ .+...||.|.|+|+
T Consensus 66 ~~~pG~~~~~tf---~~~G~y~y~C~--~H~~~gM~G~i~V~ 102 (102)
T 1kdj_A 66 LSEDEPSFKAKV---STPGTYTFYCT--PHKSANMKGTLTVK 102 (102)
T ss_dssp BBTTBCEEEECC---CSCEEEEEECS--TTGGGTCEEEEEEC
T ss_pred ecCCCCEEEEEe---CCCeEEEEEeC--CCcccCCeEEEEEC
Confidence 478999999987 47999999999 55667999999985
No 96
>2g23_A PHS, phenoxazinone synthase; copper, metalloprotein, laccase, multicopper oxidase, hexamer; 2.30A {Streptomyces antibioticus} PDB: 3gyr_A
Probab=98.24 E-value=4.2e-06 Score=89.10 Aligned_cols=90 Identities=10% Similarity=0.042 Sum_probs=74.9
Q ss_pred ceEEEcCcCC-CcceEEEeCCCEEEEEEEEcCCCCeEeEEEeCceeEEEEecCc------------------------cC
Q 011178 142 DGLVINGRGS-NANTFTVDQGKTYRFRISNVGISTSINFRIQGHKMLLVEVEGT------------------------HT 196 (491)
Q Consensus 142 ~~~~vNG~~~-~~~~~~v~~g~~~rlR~iN~~~~~~~~~~i~~~~~~via~DG~------------------------~~ 196 (491)
..++|||+.+ +.+.++++.|++++|+|+|.+. ..+.|||++|.|+|++.+|. .+
T Consensus 459 ~~~~iNG~~~~~~~~~~v~~G~~v~w~l~N~~~-~~HPiHlHg~~F~Vl~r~~~~~~~~~~~~~g~~~~~~~~~g~~~~~ 537 (612)
T 2g23_A 459 KTYRRTAATFNDGLGFTIGEGTHEQWTFLNLSP-ILHPMHIHLADFQVLGRDAYDASGFDLALGGTRTPVRLDPDTPVPL 537 (612)
T ss_dssp EEEEEEECSTTSCCCEEEETTCEEEEEEEECSS-SCEEEEESSCCEEEEEEEEEECTTEETTTTEESSCEEEEEEEECCC
T ss_pred eEEEECCccCCCCCceEecCCCEEEEEEEeCCC-CCCCeEEcCceEEEecccCcccccccccccCcccccccccccccCC
Confidence 3588999975 4578999999999999999985 48999999999999987531 12
Q ss_pred ---CCCccCeEEEcCCceEEEEEEeCCCCcceEEEEEee
Q 011178 197 ---LQNTYDSLDIHLGQSYSVLVRADQPPQGYYIVISTR 232 (491)
Q Consensus 197 ---~p~~~~~l~l~pGeR~dv~v~~~~~~g~~~i~~~~~ 232 (491)
++...|++.+.||+++.|.++++..+|.|.+.++..
T Consensus 538 ~~~e~~~kDTv~v~Pg~~~~i~~~~~~~pG~w~~HCHil 576 (612)
T 2g23_A 538 APNELGHKDVFQVPGPQGLRVMGKFDGAYGRFMYHCHLL 576 (612)
T ss_dssp CTTSSSCBSEEEECSSEEEEEEEECCSCCEEEEEEESSH
T ss_pred CcccccccCeEEECCCcEEEEEEEeCCCCccEEEEeCch
Confidence 223579999999999999999986689998888764
No 97
>3tu6_A Pseudoazurin (blue copper protein); cupredoxins, beta barrel, electron transfer, redox, electron transport; 2.00A {Sinorhizobium meliloti}
Probab=98.23 E-value=9.7e-07 Score=74.34 Aligned_cols=40 Identities=20% Similarity=0.237 Sum_probs=33.2
Q ss_pred CCCCCCeEEEEEEeCCCccceeEeCCccccccCCceeEEEEecCC
Q 011178 56 PIPPGKNFTYVLQVKDQIGSYFYFPSLAFHKAAGGYGGIKIASRP 100 (491)
Q Consensus 56 ~i~PG~~~~Y~f~~~~~~Gt~wYH~H~~~q~~~Gl~G~liV~~~~ 100 (491)
-+.||++|+|.| +.+|+|||||-.| ...||.|.|+|.++.
T Consensus 59 ~s~pGet~s~TF---~~pG~y~y~C~~H--~~~GM~G~I~V~~~~ 98 (127)
T 3tu6_A 59 KGKINEEITVTL---SKPGVYMYQCAPH--VGMGMIGAIVVGEPA 98 (127)
T ss_dssp BCCTTCCCEEEC---CSCEEEEEECTTT--GGGTCEEEEEESSCT
T ss_pred ecCCCCEEEEEe---CCCeEEEEEeCCC--CcCCcEEEEEECcCC
Confidence 357999988888 4799999999844 567999999999754
No 98
>1plc_A Plastocyanin; electron transport; 1.33A {Populus nigra} SCOP: b.6.1.1 PDB: 1pnc_A 1pnd_A 1tkw_A* 2pcy_A 3pcy_A 4pcy_A 5pcy_A 6pcy_A 1jxg_A 1ag6_A 1ylb_B 2pcf_A* 1oow_A 1tef_A 9pcy_A 1teg_A 1byo_A
Probab=98.22 E-value=4.1e-06 Score=67.34 Aligned_cols=65 Identities=23% Similarity=0.299 Sum_probs=45.4
Q ss_pred EEEecCCCCCeeeecccCCCCCCCCCCCC-------CCCCCCCCCCeEEEEEEeCCCccceeEeCCccccccCCceeEEE
Q 011178 23 VVLNFIYMAPLITLNGVQQRRNSWQDGVY-------GTNCPIPPGKNFTYVLQVKDQIGSYFYFPSLAFHKAAGGYGGIK 95 (491)
Q Consensus 23 ~~~N~l~~~~siH~HG~~~~~~~~~DG~~-------~~q~~i~PG~~~~Y~f~~~~~~Gt~wYH~H~~~q~~~Gl~G~li 95 (491)
+++|.-..+++++.++... .+|.. .....+.||+++++.|+ ++|+|+|||+ .+...||.|.|+
T Consensus 28 ~~~n~~~~~H~v~~~~~~~-----p~~~~~~~~~~~~~~~~~~~G~~~~~tf~---~~G~y~~~C~--~H~~~gM~G~i~ 97 (99)
T 1plc_A 28 VFKNNAGFPHNIVFDEDSI-----PSGVDASKISMSEEDLLNAKGETFEVALS---NKGEYSFYCS--PHQGAGMVGKVT 97 (99)
T ss_dssp EEEECSSCCBCCEECTTSS-----CTTCCHHHHCCCTTCCBCSTTCEEEEECC---SCEEEEEECG--GGTTTTCEEEEE
T ss_pred EEEECCCCceEEEEeCCCC-----cccccccccccccCccccCCCCEEEEEEC---CCceEEEEcC--CCcccCCEEEEE
Confidence 3578866677887776432 12211 11234789999988773 7999999999 445579999999
Q ss_pred Ee
Q 011178 96 IA 97 (491)
Q Consensus 96 V~ 97 (491)
|+
T Consensus 98 V~ 99 (99)
T 1plc_A 98 VN 99 (99)
T ss_dssp EC
T ss_pred EC
Confidence 84
No 99
>3ef4_A Pseudoazurin, blue copper protein; electron transfer, electron transport; HET: PO4; 1.18A {Hyphomicrobium denitrificans} SCOP: b.6.1.0
Probab=98.21 E-value=3.7e-06 Score=70.28 Aligned_cols=63 Identities=13% Similarity=0.066 Sum_probs=42.2
Q ss_pred EEecCCCCCeeeecccCCCCCCCCCCCCCCCCCCCCCCeEEEEEEeCCCccceeEeCCccccccCCceeEEEEecC
Q 011178 24 VLNFIYMAPLITLNGVQQRRNSWQDGVYGTNCPIPPGKNFTYVLQVKDQIGSYFYFPSLAFHKAAGGYGGIKIASR 99 (491)
Q Consensus 24 ~~N~l~~~~siH~HG~~~~~~~~~DG~~~~q~~i~PG~~~~Y~f~~~~~~Gt~wYH~H~~~q~~~Gl~G~liV~~~ 99 (491)
++|.- .++++..+... +-+|.. ..-+.||++|+|.| +.+|+|||||-. +...||.|.|+|.++
T Consensus 34 f~n~~-~~Hnv~~~~~~-----~p~g~~--~~~~~pg~t~s~TF---~~~G~y~Y~C~~--H~~~GM~G~I~V~~p 96 (124)
T 3ef4_A 34 FVPTD-KSHNAESVREV-----WPEGVA--PVKGGFSKEVVFNA---EKEGLYVLKCAP--HYGMGMVVLVQVGKP 96 (124)
T ss_dssp EECSS-SSCCCEECTTT-----SCTTSC--CCBCCTTCCEEEEC---CSSEEEEEECTT--TGGGTCEEEEEESSC
T ss_pred EEECC-CCccEEEeCCc-----CCCCcc--ccccCCCCEEEEEe---CCCeEEEEEcCC--CCcCCCEEEEEECCC
Confidence 55553 46666655221 112321 23367999999888 479999999964 455799999999874
No 100
>1plc_A Plastocyanin; electron transport; 1.33A {Populus nigra} SCOP: b.6.1.1 PDB: 1pnc_A 1pnd_A 1tkw_A* 2pcy_A 3pcy_A 4pcy_A 5pcy_A 6pcy_A 1jxg_A 1ag6_A 1ylb_B 2pcf_A* 1oow_A 1tef_A 9pcy_A 1teg_A 1byo_A
Probab=98.15 E-value=5.6e-06 Score=66.50 Aligned_cols=82 Identities=13% Similarity=0.027 Sum_probs=58.2
Q ss_pred eEEeecCCcEEEEEEEcCCCCCCceeccCCCeEEEeeccCCCCCCCCCCcccCCCCceeeEEeCCCCEEEEEEEccCcce
Q 011178 363 SVMAADFRGFAEVVFENPEDTLQSWHIDGHNFFAVGMDGGEWTPASRLTYNLRDTISRCTVQVYPKSWTAVYVPLDNVGM 442 (491)
Q Consensus 363 ~~~~~~~g~~v~~~i~N~~~~~HP~HlHG~~F~Vl~~g~g~~~~~~~~~~~~~~p~~rDTv~v~p~~~~~irf~adnpG~ 442 (491)
..+.++.|++|.| .|.+...|.++++...+- .+ .+. ... ...++.+.+.||+...+.| +.||.
T Consensus 17 ~~i~v~~G~tV~~--~n~~~~~H~v~~~~~~~p-----~~-~~~-----~~~--~~~~~~~~~~~G~~~~~tf--~~~G~ 79 (99)
T 1plc_A 17 SEFSISPGEKIVF--KNNAGFPHNIVFDEDSIP-----SG-VDA-----SKI--SMSEEDLLNAKGETFEVAL--SNKGE 79 (99)
T ss_dssp SEEEECTTCEEEE--EECSSCCBCCEECTTSSC-----TT-CCH-----HHH--CCCTTCCBCSTTCEEEEEC--CSCEE
T ss_pred CEEEECCCCEEEE--EECCCCceEEEEeCCCCc-----cc-ccc-----ccc--ccccCccccCCCCEEEEEE--CCCce
Confidence 3578899998887 677777899999865330 00 000 000 0123556788999888766 58999
Q ss_pred eeeeecchhhhhcceEEEEEE
Q 011178 443 WNIRSENWARQYLGQQFYLRV 463 (491)
Q Consensus 443 w~~HCHil~H~d~GMm~~~~V 463 (491)
|.|||+ .|..+||...+.|
T Consensus 80 y~~~C~--~H~~~gM~G~i~V 98 (99)
T 1plc_A 80 YSFYCS--PHQGAGMVGKVTV 98 (99)
T ss_dssp EEEECG--GGTTTTCEEEEEE
T ss_pred EEEEcC--CCcccCCEEEEEE
Confidence 999999 5999999999987
No 101
>1byp_A Protein (plastocyanin); electron transfer, photosynthesis, acidic patch, double mutant, electron transport; 1.75A {Silene latifolia subsp} SCOP: b.6.1.1 PDB: 1pla_A 1plb_A
Probab=98.13 E-value=1.2e-05 Score=64.62 Aligned_cols=66 Identities=18% Similarity=0.290 Sum_probs=46.8
Q ss_pred EEEEecCCCCCeeeecccCCCCCCCCCCCC-------CCCCCCCCCCeEEEEEEeCCCccceeEeCCccccccCCceeEE
Q 011178 22 LVVLNFIYMAPLITLNGVQQRRNSWQDGVY-------GTNCPIPPGKNFTYVLQVKDQIGSYFYFPSLAFHKAAGGYGGI 94 (491)
Q Consensus 22 i~~~N~l~~~~siH~HG~~~~~~~~~DG~~-------~~q~~i~PG~~~~Y~f~~~~~~Gt~wYH~H~~~q~~~Gl~G~l 94 (491)
|+++|.-..++++|.++... .+|.. .....+.||+++++.|+ ++|+|+|||+ .+...||.|.|
T Consensus 27 V~~~n~~~~~H~~~~~~~~~-----p~g~~~~~~~~~~~~~~~~~G~~~~~~f~---~~G~y~~~C~--~H~~~gM~G~i 96 (99)
T 1byp_A 27 ITFKNNAGFPHNDLFDKKEV-----PAGVDVTKISMPEEDLLNAPGEEYSVTLT---EKGTYKFYCA--PHAGAGMVGKV 96 (99)
T ss_dssp EEEEECSSCCBCCEECTTSS-----CTTCCHHHHSCCTTCCBCSTTCEEEEEEC---SCEEEEEECG--GGTTTTCEEEE
T ss_pred EEEEECCCCcceEEEeCCCC-----ccccccccccccccceeeCCCCEEEEEeC---CCcEEEEEcC--CccccCCEEEE
Confidence 34678866788888886432 12221 11234789999998874 7999999999 44556999999
Q ss_pred EEe
Q 011178 95 KIA 97 (491)
Q Consensus 95 iV~ 97 (491)
+|+
T Consensus 97 ~V~ 99 (99)
T 1byp_A 97 TVN 99 (99)
T ss_dssp EEC
T ss_pred EEC
Confidence 984
No 102
>3c75_A Amicyanin; copper proteins, electron transfer complex, TTQ, electron transport, oxidoreductase, periplasm, transport, metal- binding; HET: TRQ; 2.50A {Paracoccus versutus}
Probab=98.10 E-value=7e-06 Score=69.75 Aligned_cols=61 Identities=15% Similarity=0.105 Sum_probs=43.1
Q ss_pred EEEecCCCCCeeeecccCCCCCCCCCCCCC-CCCCCCCCCeEEEEEEeCCCccceeEeCCccccccCCceeEEEEe
Q 011178 23 VVLNFIYMAPLITLNGVQQRRNSWQDGVYG-TNCPIPPGKNFTYVLQVKDQIGSYFYFPSLAFHKAAGGYGGIKIA 97 (491)
Q Consensus 23 ~~~N~l~~~~siH~HG~~~~~~~~~DG~~~-~q~~i~PG~~~~Y~f~~~~~~Gt~wYH~H~~~q~~~Gl~G~liV~ 97 (491)
+++|....++++++... .+|... ....+.||++++|.| +++|+|+|+|-.|. ||.|.|+|+
T Consensus 71 ~~~N~d~~~H~v~~~~~-------~~g~~~~~s~~l~pG~t~~~tF---~~~G~y~y~C~~H~----gM~G~I~V~ 132 (132)
T 3c75_A 71 YWVNGEVMPHNVAFKKG-------IVGEDAFRGEMMTKDQAYAITF---NEAGSYDYFCTPHP----FMRGKVIVE 132 (132)
T ss_dssp EEEECSSSCBCCEECTT-------TSSSSCEECCCBCTTEEEEEEE---CSCEEEEEECSSCT----TCEEEEEEC
T ss_pred EEEECCCCceEEEEeCC-------CCCcccccccccCCCCEEEEEc---CCCEEEEEEeCCCc----CCEEEEEEC
Confidence 35688666666666432 123222 334588999999888 47999999997653 999999985
No 103
>3gyr_A PHS, phenoxazinone synthase; metalloprotein, laccase, multicopper oxidase, hexamer, oxidoreductase, antibiotic biosynthesis; 2.30A {Streptomyces antibioticus}
Probab=98.03 E-value=7.8e-05 Score=79.98 Aligned_cols=90 Identities=11% Similarity=0.070 Sum_probs=72.3
Q ss_pred ceEEEcCcCC-CcceEEEeCCCEEEEEEEEcCCCCeEeEEEeCceeEEEEecCccC------------------------
Q 011178 142 DGLVINGRGS-NANTFTVDQGKTYRFRISNVGISTSINFRIQGHKMLLVEVEGTHT------------------------ 196 (491)
Q Consensus 142 ~~~~vNG~~~-~~~~~~v~~g~~~rlR~iN~~~~~~~~~~i~~~~~~via~DG~~~------------------------ 196 (491)
..+.+||+.+ ....+.++.|++++|.|+|.+.. .+.|||+||.|+|++.+|...
T Consensus 459 ~~~~~n~~~~~~~~~~~~~~g~~~~w~i~N~~~~-~HP~HLHG~~F~Vl~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~ 537 (612)
T 3gyr_A 459 KTYRRTARTFNDGLGFTIGEGTHEQWTFLNLSPI-LHPMHIHLADFQVLGRDAYDASGFDLALGGTRTPVRLDPDTPVPL 537 (612)
T ss_dssp EEEEEEECSTTSCCCEEEETTCEEEEEEEECSSS-CEEEEESSCEEEEEEEEEEECTTEETTTTEESSCEEEEEEEECCC
T ss_pred ccccccCccCCCCcceEeCCCCEEEEEEEcCCCC-CcCEeECCCcEEEEeecCCcCccccccccccccccccccccccCc
Confidence 3577888764 34678899999999999999865 799999999999998765421
Q ss_pred ---CCCccCeEEEcCCceEEEEEEeCCCCcceEEEEEee
Q 011178 197 ---LQNTYDSLDIHLGQSYSVLVRADQPPQGYYIVISTR 232 (491)
Q Consensus 197 ---~p~~~~~l~l~pGeR~dv~v~~~~~~g~~~i~~~~~ 232 (491)
++...|++.+.+|+.+.|.+++...+|.|.+.++..
T Consensus 538 ~~~~~~~kDTv~v~~~~~v~i~~rfadnpG~w~~HCHil 576 (612)
T 3gyr_A 538 APNELGHKDVFQVPGPQGLRVMGKFDGAYGRFMYHCHLL 576 (612)
T ss_dssp CTTCSSCBSEEEECSSEEEEEEEECCSCCEEEEEEESSH
T ss_pred ccccCCCCcEEEECCCCEEEEEEEeCCCCcceEEcCCCh
Confidence 122368999999999999999655789888888764
No 104
>2ov0_A Amicyanin; beta-sandwich, electron transport; 0.75A {Paracoccus denitrificans} SCOP: b.6.1.1 PDB: 1aaj_A 1aan_A 1aac_A 1mg2_C* 1mg3_C* 1t5k_A 2gc4_C* 2gc7_C* 2j55_A* 2j56_A* 2j57_A* 2mta_A* 1bxa_A 2rac_A 3l45_A 3ie9_A 3iea_A 2idq_A 2ids_A 1sf3_A ...
Probab=98.00 E-value=1.4e-05 Score=65.07 Aligned_cols=71 Identities=10% Similarity=-0.012 Sum_probs=50.9
Q ss_pred EEeecCCcEEEEEEEcCCCCCCceeccCCCeEEEeeccCCCCCCCCCCcccCCCCceeeEEeCCCCEEEEEEEccCccee
Q 011178 364 VMAADFRGFAEVVFENPEDTLQSWHIDGHNFFAVGMDGGEWTPASRLTYNLRDTISRCTVQVYPKSWTAVYVPLDNVGMW 443 (491)
Q Consensus 364 ~~~~~~g~~v~~~i~N~~~~~HP~HlHG~~F~Vl~~g~g~~~~~~~~~~~~~~p~~rDTv~v~p~~~~~irf~adnpG~w 443 (491)
.+.++.|+.|+|+ |.+...|-+|++... .|. . .+ +.-.+.||+...+.| +.||.+
T Consensus 34 ~i~v~~Gd~V~~~--N~d~~~H~v~~~~~~-------~g~------~-------~~-~~~~~~pG~~~~~tf--~~~G~y 88 (105)
T 2ov0_A 34 ELHVKVGDTVTWI--NREAMPHNVHFVAGV-------LGE------A-------AL-KGPMMKKEQAYSLTF--TEAGTY 88 (105)
T ss_dssp EEEECTTCEEEEE--ECSSSCBCCEECTTT-------SSS------S-------CE-ECCCBCTTEEEEEEE--CSCEEE
T ss_pred EEEECCCCEEEEE--ECCCCCEEEEEcCCC-------CCc------c-------cc-cccccCCCCEEEEEe--CCCEEE
Confidence 3678999998885 777778999987521 111 0 01 222367888776666 899999
Q ss_pred eeeecchhhhhcceEEEEEE
Q 011178 444 NIRSENWARQYLGQQFYLRV 463 (491)
Q Consensus 444 ~~HCHil~H~d~GMm~~~~V 463 (491)
.|||++ |. ||...+.|
T Consensus 89 ~y~C~~--H~--gM~G~i~V 104 (105)
T 2ov0_A 89 DYHCTP--HP--FMRGKVVV 104 (105)
T ss_dssp EEECSS--CT--TCEEEEEE
T ss_pred EEEeCC--CC--CCEEEEEE
Confidence 999998 55 99998877
No 105
>2cal_A Rusticyanin; iron respiratory electron transport chain, blue protein, electron transport, metal- binding, periplasmic; 1.10A {Thiobacillus ferrooxidans} PDB: 1cur_A 1gy2_A 1a3z_A 1e30_A 1gy1_A 1rcy_A 1a8z_A 2cak_A
Probab=97.93 E-value=2e-05 Score=68.81 Aligned_cols=86 Identities=13% Similarity=0.025 Sum_probs=59.0
Q ss_pred EEeecCCcEEEEEEEcCC-CCCCceeccCCCeEEEeeccCCCCCCCCCCcccCCCCce---eeEEeCCCC--EEEEEEEc
Q 011178 364 VMAADFRGFAEVVFENPE-DTLQSWHIDGHNFFAVGMDGGEWTPASRLTYNLRDTISR---CTVQVYPKS--WTAVYVPL 437 (491)
Q Consensus 364 ~~~~~~g~~v~~~i~N~~-~~~HP~HlHG~~F~Vl~~g~g~~~~~~~~~~~~~~p~~r---DTv~v~p~~--~~~irf~a 437 (491)
.+.++.|+.|.+++.|.+ ...|-|-++. .+ ..+... ....+... -+..|.||+ ...+.|.+
T Consensus 62 ~i~V~~GD~V~~~~tN~~~~~~H~~~i~~-------~~-~~~~~~-----~~~~~~~~~~~~~~~i~PG~sgt~t~tft~ 128 (154)
T 2cal_A 62 TLEIPAGATVDVTFINTNKGFGHSFDITK-------KG-PPYAVM-----PVIDPIVAGTGFSPVPKDGKFGYTDFTWHP 128 (154)
T ss_dssp EEEECTTCEEEEEEEECCTTCCCCCEEES-------CC-SCCCSS-----CCCCSEEEEBCCCCCCBTTBEEEEEEEECC
T ss_pred EEEEeCCCEEEEEEEcCCCCeeeEEEEee-------cC-cchhcc-----ccccccccccccccccCCCCceEEEEEEEE
Confidence 478999999999999974 4445554442 11 111100 00000000 112567899 99999999
Q ss_pred cCcceeeeeecchhhhhcceEEEEEE
Q 011178 438 DNVGMWNIRSENWARQYLGQQFYLRV 463 (491)
Q Consensus 438 dnpG~w~~HCHil~H~d~GMm~~~~V 463 (491)
.||.+.||||+--|...||-..+.|
T Consensus 129 -~pGtY~y~C~~~gH~~~GM~G~IiV 153 (154)
T 2cal_A 129 -TAGTYYYVCQIPGMAATGMFGKIVV 153 (154)
T ss_dssp -CSEEEEEECCSTTTGGGTCEEEEEE
T ss_pred -CCceEEEECCCCCHHHCCCEEEEEE
Confidence 9999999999999999999999987
No 106
>1iuz_A Plastocyanin; electron transport; 1.60A {Ulva pertusa} SCOP: b.6.1.1 PDB: 7pcy_A
Probab=97.89 E-value=1e-05 Score=64.89 Aligned_cols=65 Identities=17% Similarity=0.071 Sum_probs=42.9
Q ss_pred EEEecCCCCCeeeecccCCCCCCCCCCCC-----CCCCCCCCCCeEEEEEEeCCCccceeEeCCccccccCCceeEEEEe
Q 011178 23 VVLNFIYMAPLITLNGVQQRRNSWQDGVY-----GTNCPIPPGKNFTYVLQVKDQIGSYFYFPSLAFHKAAGGYGGIKIA 97 (491)
Q Consensus 23 ~~~N~l~~~~siH~HG~~~~~~~~~DG~~-----~~q~~i~PG~~~~Y~f~~~~~~Gt~wYH~H~~~q~~~Gl~G~liV~ 97 (491)
++.|.-..++++....-. +-+|.- .....+.||+++++.| +++|+|+|+|-.| ...||.|.|+|+
T Consensus 29 ~~~n~~~~~H~v~~~~~~-----~p~g~~~~~~~~~~~~~~~g~~~~~tf---~~~G~y~y~C~~H--~~~gM~G~I~V~ 98 (98)
T 1iuz_A 29 EFVNNAGFPHNIVFDEDA-----VPAGVDADAISYDDYLNSKGETVVRKL---STPGVYGVYCEPH--AGAGMKMTITVQ 98 (98)
T ss_dssp EEEECSSCCEEEEECTTS-----SCTTCCHHHHCEEEEECSTTCEEEEEC---CSCEEEEEECTTT--GGGTCEEEEEEC
T ss_pred EEEECCCCCEEEEEeCCC-----CccccccccccccccccCCCCEEEEEc---CCCEEEEEEchhh--ccCCCEEEEEEC
Confidence 356775556666655421 112321 0112478999999887 4799999999864 445999999985
No 107
>1cuo_A Protein (azurin ISO-2); beta barrel, periplasmic, electron transport; 1.60A {Methylomonas SP} SCOP: b.6.1.1 PDB: 1uat_A
Probab=97.89 E-value=1.7e-05 Score=66.95 Aligned_cols=42 Identities=24% Similarity=0.263 Sum_probs=35.6
Q ss_pred CCCCCCeEEEEEEeC--CCccceeEeCCccccccCCceeEEEEec
Q 011178 56 PIPPGKNFTYVLQVK--DQIGSYFYFPSLAFHKAAGGYGGIKIAS 98 (491)
Q Consensus 56 ~i~PG~~~~Y~f~~~--~~~Gt~wYH~H~~~q~~~Gl~G~liV~~ 98 (491)
.|.||+++++.|+++ .++|+|||.|-...+.. ||.|.|+|.+
T Consensus 86 ~l~pGet~svtf~~~~~~~~G~Y~f~C~~pgH~~-~M~G~i~V~~ 129 (129)
T 1cuo_A 86 IIGGGEKTSVKFKVSALSKDEAYTYFCSYPGHFS-MMRGTLKLEE 129 (129)
T ss_dssp CBCTTCEEEEEEEGGGCCTTSCEEEECCSTTCTT-TSEEEEEEEC
T ss_pred EECCCCEEEEEEeccccCCCceEEEEeCCCCchH-cCEEEEEEeC
Confidence 489999999999984 37999999997665565 8999999974
No 108
>1fwx_A Nitrous oxide reductase; beta-propeller domain, cupredoxin domain, CUZ site, CUA site oxidoreductase; 1.60A {Paracoccus denitrificans} SCOP: b.6.1.4 b.69.3.1 PDB: 2iwk_A 2iwf_A
Probab=97.89 E-value=3.2e-05 Score=81.38 Aligned_cols=75 Identities=9% Similarity=0.060 Sum_probs=60.6
Q ss_pred eEEeecCCcEEEEEEEcCCC---CCCceeccCCCeEEEeeccCCCCCCCCCCcccCCCCceeeEEeCCCCEEEEEEEccC
Q 011178 363 SVMAADFRGFAEVVFENPED---TLQSWHIDGHNFFAVGMDGGEWTPASRLTYNLRDTISRCTVQVYPKSWTAVYVPLDN 439 (491)
Q Consensus 363 ~~~~~~~g~~v~~~i~N~~~---~~HP~HlHG~~F~Vl~~g~g~~~~~~~~~~~~~~p~~rDTv~v~p~~~~~irf~adn 439 (491)
..+.++.|+.|+|++.|.+. ..|.|+++++.+ + ..+.||+...+.|.++.
T Consensus 513 p~I~V~~Gd~V~~~ltN~d~~~Dv~Hgf~ip~~gv-------------------------~--~~i~PG~t~t~~Fta~~ 565 (595)
T 1fwx_A 513 ESFTVKEGDEVTVIVTNLDEIDDLTHGFTMGNYGV-------------------------A--MEIGPQMTSSVTFVAAN 565 (595)
T ss_dssp SEEEEETTCEEEEEEEECCCSTTCCEEEEETTTTE-------------------------E--EEECTTCEEEEEEECCS
T ss_pred CEEEEECCCEEEEEEEeCCCCCCceeeEEecCCCc-------------------------c--eeeCCCCeEEEEEECCC
Confidence 45789999999999999643 368888876432 1 46788999999999999
Q ss_pred cceeeeeecc---hhhhhcceEEEEEEecC
Q 011178 440 VGMWNIRSEN---WARQYLGQQFYLRVYSS 466 (491)
Q Consensus 440 pG~w~~HCHi---l~H~d~GMm~~~~V~~~ 466 (491)
||.|.||||. ..|. ||...+.|.++
T Consensus 566 pGtY~yhC~e~Cg~~H~--gM~G~IiV~p~ 593 (595)
T 1fwx_A 566 PGVYWYYCQWFCHALHM--EMRGRMLVEPK 593 (595)
T ss_dssp CEEEEEECCSCCSTTCT--TCEEEEEEECC
T ss_pred CEEEEEECCCCCCCCcc--CCEEEEEEEcC
Confidence 9999999993 4564 99999998754
No 109
>1id2_A Amicyanin; beta barrel, type-1 blue copper protein, electron transfer protein, electron transport; 2.15A {Paracoccus versutus} SCOP: b.6.1.1
Probab=97.86 E-value=2.6e-05 Score=63.49 Aligned_cols=35 Identities=17% Similarity=0.273 Sum_probs=30.0
Q ss_pred CCCCCCeEEEEEEeCCCccceeEeCCccccccCCceeEEEEe
Q 011178 56 PIPPGKNFTYVLQVKDQIGSYFYFPSLAFHKAAGGYGGIKIA 97 (491)
Q Consensus 56 ~i~PG~~~~Y~f~~~~~~Gt~wYH~H~~~q~~~Gl~G~liV~ 97 (491)
.+.||+++++.| +.+|+|+|+|-.|. ||.|.|+|+
T Consensus 72 ~l~~g~~~~~tf---~~~G~y~~~C~~H~----~M~G~I~V~ 106 (106)
T 1id2_A 72 MMTKDQAYAITF---NEAGSYDYFCTPHP----FMRGKVIVE 106 (106)
T ss_dssp CBCTTEEEEEEE---CSCEEEEEECSSCT----TCEEEEEEC
T ss_pred ccCCCCEEEEEe---CCCEEEEEEeCCCC----CCEEEEEEC
Confidence 478999999888 47999999998753 999999985
No 110
>1paz_A Pseudoazurin precursor; electron transfer(cuproprotein); 1.55A {Alcaligenes faecalis} SCOP: b.6.1.1 PDB: 1pza_A 1pzb_A 1pzc_A 2p80_D 3nyk_A 3paz_A 8paz_A 4paz_A 5paz_A 6paz_A 7paz_A 1py0_A*
Probab=97.86 E-value=3.7e-05 Score=64.29 Aligned_cols=38 Identities=21% Similarity=0.249 Sum_probs=31.2
Q ss_pred CCCCCeEEEEEEeCCCccceeEeCCccccccCCceeEEEEecC
Q 011178 57 IPPGKNFTYVLQVKDQIGSYFYFPSLAFHKAAGGYGGIKIASR 99 (491)
Q Consensus 57 i~PG~~~~Y~f~~~~~~Gt~wYH~H~~~q~~~Gl~G~liV~~~ 99 (491)
..||++++|.| +.+|+|||+|.. +...||.|.|+|.++
T Consensus 58 ~~pG~t~~~tF---~~~G~y~y~C~~--H~~~gM~G~I~V~~~ 95 (123)
T 1paz_A 58 SKINENYVLTV---TQPGAYLVKCTP--HYAMGMIALIAVGDS 95 (123)
T ss_dssp CCTTCCEEEEC---CSCEEEEEECTT--TGGGTCEEEEEESSS
T ss_pred cCCCCEEEEEe---CCCEEEEEEeCC--cccCCCEEEEEEcCC
Confidence 46999988877 479999999974 445799999999874
No 111
>1pmy_A Pseudoazurin; electron transfer(cuproprotein); 1.50A {Methylobacterium extorquens} SCOP: b.6.1.1
Probab=97.85 E-value=3.5e-05 Score=64.44 Aligned_cols=38 Identities=16% Similarity=0.191 Sum_probs=31.6
Q ss_pred CCCCCeEEEEEEeCCCccceeEeCCccccccCCceeEEEEecC
Q 011178 57 IPPGKNFTYVLQVKDQIGSYFYFPSLAFHKAAGGYGGIKIASR 99 (491)
Q Consensus 57 i~PG~~~~Y~f~~~~~~Gt~wYH~H~~~q~~~Gl~G~liV~~~ 99 (491)
+.||++++|.| +.+|+|+|+|.. +...||.|.|+|.++
T Consensus 58 ~~pG~t~~~tF---~~~G~y~y~C~~--H~~~gM~G~I~V~~~ 95 (123)
T 1pmy_A 58 TTVGQEAVVKF---DKEGVYGFKCAP--HYMMGMVALVVVGDK 95 (123)
T ss_dssp CCTTSCEEEEC---CSCEEEEEECST--TTTTTCEEEEEESSC
T ss_pred cCCCCEEEEEe---CCCeEEEEEeCC--ccccCCEEEEEEcCC
Confidence 57999988887 479999999974 445799999999874
No 112
>3ay2_A Lipid modified azurin protein; beta sandwich, bacterial protein, anticancer, anti-HIV/AIDS, antiparasitic activity, antitumor protein; 1.90A {Neisseria gonorrhoeae}
Probab=97.82 E-value=1.8e-05 Score=69.60 Aligned_cols=43 Identities=19% Similarity=0.140 Sum_probs=35.6
Q ss_pred CCCCCCCeEEEEEEeC-CCccceeEeCCccccccCCceeEEEEec
Q 011178 55 CPIPPGKNFTYVLQVK-DQIGSYFYFPSLAFHKAAGGYGGIKIAS 98 (491)
Q Consensus 55 ~~i~PG~~~~Y~f~~~-~~~Gt~wYH~H~~~q~~~Gl~G~liV~~ 98 (491)
..|.||+++++.|+++ -++|+|||+|-...+.. ||.|-|+|.+
T Consensus 124 ~~l~pGet~svtf~~~~lkpG~Y~f~Ct~PgH~~-gM~G~i~V~~ 167 (167)
T 3ay2_A 124 KLIGGGEESSLTLDPAKLADGDYKFACTFPGHGA-LMNGKVTLVD 167 (167)
T ss_dssp CCBCTTCEEEEEECGGGGTTSCEEEECCSTTGGG-TSEEEEEEEC
T ss_pred eeeCCCCEEEEEEecCCCCCcEEEEEcCCCCchh-cCEEEEEEeC
Confidence 3489999999999984 26999999997655555 8999999974
No 113
>2ccw_A Azurin II, AZN-2; electron transport (cuproprotein), alcaligenes xylosoxidans, electron transfer, cupredoxin, electron transport; 1.13A {Alcaligenes xylosoxydans} SCOP: b.6.1.1 PDB: 1dz0_A 1dyz_A 1aiz_A 1azb_A 1azc_A 1uri_A 2aza_A 1a4a_A 1a4b_A 1a4c_A
Probab=97.62 E-value=8.7e-05 Score=62.49 Aligned_cols=42 Identities=31% Similarity=0.329 Sum_probs=33.8
Q ss_pred CCCCCCeEEEEEEeC-CCccc-eeEeCCccccccCCceeEEEEec
Q 011178 56 PIPPGKNFTYVLQVK-DQIGS-YFYFPSLAFHKAAGGYGGIKIAS 98 (491)
Q Consensus 56 ~i~PG~~~~Y~f~~~-~~~Gt-~wYH~H~~~q~~~Gl~G~liV~~ 98 (491)
.|.||++++..|+++ -.+|+ |||.|-...+.. ||.|.|+|.+
T Consensus 86 ~l~pGet~svtf~~~~l~~G~~Y~f~C~~pgH~~-gM~G~i~V~~ 129 (129)
T 2ccw_A 86 VIGGGESDSVTFDVSKIAAGENYAYFCSFPGHWA-MMKGTLKLGS 129 (129)
T ss_dssp CBCTTCEEEEEEEGGGSCTTCCEEEECCSTTGGG-TSEEEEEECC
T ss_pred EECCCCEEEEEEeccccCCCceEEEEeCCCChhH-cCEEEEEEeC
Confidence 489999999999984 14655 999997665665 8999999963
No 114
>2iaa_C Azurin; quinoprotein, tryptophan tryptophylquinone, cupredoxin, electron transfer, oxidoreductase/electron transport comple; HET: TRQ; 1.95A {Alcaligenes faecalis} PDB: 2h47_C* 2h3x_C*
Probab=97.60 E-value=0.00012 Score=61.57 Aligned_cols=42 Identities=26% Similarity=0.277 Sum_probs=34.5
Q ss_pred CCCCCCeEEEEEEeC-CCccc-eeEeCCccccccCCceeEEEEec
Q 011178 56 PIPPGKNFTYVLQVK-DQIGS-YFYFPSLAFHKAAGGYGGIKIAS 98 (491)
Q Consensus 56 ~i~PG~~~~Y~f~~~-~~~Gt-~wYH~H~~~q~~~Gl~G~liV~~ 98 (491)
.|.||+++++.|+++ -++|+ |+|.|-...+.. ||.|.|+|.+
T Consensus 85 ~l~pGes~~vtf~~~~l~~G~~Y~f~C~~PgH~~-gM~G~i~V~~ 128 (128)
T 2iaa_C 85 VIGGGETDSVTFDVSKLKEGEDYAFFCSFPGHWS-IMKGTIELGS 128 (128)
T ss_dssp CBCTTCEEEEEEESSCCCTTCCEEEECCSTTCTT-TSEEEEEECC
T ss_pred eeCCCCEEEEEEeccccCCCceEEEEECCCChhH-CCEEEEEEeC
Confidence 489999999999984 15885 999998765665 8999999963
No 115
>2ux6_A Pseudoazurin; type-1 copper, metal-binding, redox potential, copper, transport, cupredoxin, periplasmic, electron transport; 1.3A {Achromobacter cycloclastes} PDB: 2ux7_A 2uxf_A 2uxg_A 1bqk_A 1bqr_A 1zia_A 1zib_A 2jkw_A
Probab=97.60 E-value=0.00014 Score=60.76 Aligned_cols=37 Identities=11% Similarity=0.048 Sum_probs=30.7
Q ss_pred CCCCCCeEEEEEEeCCCccceeEeCCccccccCCceeEEEEecC
Q 011178 56 PIPPGKNFTYVLQVKDQIGSYFYFPSLAFHKAAGGYGGIKIASR 99 (491)
Q Consensus 56 ~i~PG~~~~Y~f~~~~~~Gt~wYH~H~~~q~~~Gl~G~liV~~~ 99 (491)
-+.||++++|.| +++|+|||+|-.|.. |.|.|+|.+.
T Consensus 57 ~~~~g~t~~~tF---~~~G~y~y~C~~H~~----M~G~I~V~~~ 93 (122)
T 2ux6_A 57 KSKINENYKVTF---TAPGVYGVKCTPHPF----MVGVVQVGDA 93 (122)
T ss_dssp BCCTTCCEEEEE---CSCEEEEEEETTEEE----EEEEEEESSS
T ss_pred ecCCCCEEEEEe---CCCEEEEEEeCCCcc----CEEEEEEeCC
Confidence 357999998888 479999999987533 9999999874
No 116
>1nwp_A Azurin; electron transport, cupredoxin, electron transfer; 1.60A {Pseudomonas putida} SCOP: b.6.1.1 PDB: 1nwo_A 1joi_A
Probab=97.45 E-value=0.00066 Score=56.98 Aligned_cols=41 Identities=22% Similarity=0.258 Sum_probs=33.8
Q ss_pred CCCCCCeEEEEEEeC-CCccc-eeEeCCccccccCCceeEEEEe
Q 011178 56 PIPPGKNFTYVLQVK-DQIGS-YFYFPSLAFHKAAGGYGGIKIA 97 (491)
Q Consensus 56 ~i~PG~~~~Y~f~~~-~~~Gt-~wYH~H~~~q~~~Gl~G~liV~ 97 (491)
.|.||+++++.|+++ -.+|+ |||.|-...+.. ||.|-|+|.
T Consensus 86 ~l~pGet~svtf~~~~l~~G~~Y~f~C~~PgH~~-gM~G~i~V~ 128 (128)
T 1nwp_A 86 VIGAGEKDSVTFDVSKLAAGEKYGFFCSFPGHIS-MMKGTVTLK 128 (128)
T ss_dssp CBCTTCEEEEEEEGGGSCTTSCEEEECCSTTCGG-GSEEEEEEC
T ss_pred eeCCCCEEEEEEeccccCCCceEEEEECCCChhH-CCEEEEEEC
Confidence 489999999999984 14776 999998766666 899999984
No 117
>3ef4_A Pseudoazurin, blue copper protein; electron transfer, electron transport; HET: PO4; 1.18A {Hyphomicrobium denitrificans} SCOP: b.6.1.0
Probab=97.44 E-value=0.00026 Score=59.06 Aligned_cols=75 Identities=8% Similarity=0.077 Sum_probs=52.3
Q ss_pred EEeecCCcEEEEEEEcCCCCCCceeccCCCeEEEeeccCCCCCCCCCCcccCCCCceeeEEeCCCCEEEEEEEccCccee
Q 011178 364 VMAADFRGFAEVVFENPEDTLQSWHIDGHNFFAVGMDGGEWTPASRLTYNLRDTISRCTVQVYPKSWTAVYVPLDNVGMW 443 (491)
Q Consensus 364 ~~~~~~g~~v~~~i~N~~~~~HP~HlHG~~F~Vl~~g~g~~~~~~~~~~~~~~p~~rDTv~v~p~~~~~irf~adnpG~w 443 (491)
.++++.|++|.|+..+ ..|-+..+.. .+.. . .+.+.+.+|+...+.| +.||.|
T Consensus 23 ~i~V~~GDTV~f~n~~---~~Hnv~~~~~----------~~p~-g-----------~~~~~~~pg~t~s~TF--~~~G~y 75 (124)
T 3ef4_A 23 FVKVEAGDTVKFVPTD---KSHNAESVRE----------VWPE-G-----------VAPVKGGFSKEVVFNA--EKEGLY 75 (124)
T ss_dssp EEEECTTCEEEEECSS---SSCCCEECTT----------TSCT-T-----------SCCCBCCTTCCEEEEC--CSSEEE
T ss_pred EEEECCCCEEEEEECC---CCccEEEeCC----------cCCC-C-----------ccccccCCCCEEEEEe--CCCeEE
Confidence 4678999999998554 5676665421 1110 0 0222345777766665 899999
Q ss_pred eeeecchhhhhcceEEEEEEecCC
Q 011178 444 NIRSENWARQYLGQQFYLRVYSSA 467 (491)
Q Consensus 444 ~~HCHil~H~d~GMm~~~~V~~~~ 467 (491)
.|||- .|..+||...+.|.+|.
T Consensus 76 ~Y~C~--~H~~~GM~G~I~V~~p~ 97 (124)
T 3ef4_A 76 VLKCA--PHYGMGMVVLVQVGKPV 97 (124)
T ss_dssp EEECT--TTGGGTCEEEEEESSCT
T ss_pred EEEcC--CCCcCCCEEEEEECCCC
Confidence 99997 59999999999998764
No 118
>3sbq_A Nitrous-oxide reductase; beta-propeller, cupredoxin domain, copper-contain periplasmic, oxidoreductase; 1.70A {Pseudomonas stutzeri} PDB: 3sbp_A 3sbr_A 1qni_A
Probab=97.40 E-value=0.00023 Score=73.56 Aligned_cols=73 Identities=15% Similarity=0.181 Sum_probs=49.3
Q ss_pred eeeEEEEEEecCCCCCeeeecccCCCCCCCCCCCCCCCCCCCCCCeEEEEEEeCCCccceeEeCCcc-ccccCCceeEEE
Q 011178 17 HLYTHLVVLNFIYMAPLITLNGVQQRRNSWQDGVYGTNCPIPPGKNFTYVLQVKDQIGSYFYFPSLA-FHKAAGGYGGIK 95 (491)
Q Consensus 17 ~d~v~i~~~N~l~~~~siH~HG~~~~~~~~~DG~~~~q~~i~PG~~~~Y~f~~~~~~Gt~wYH~H~~-~q~~~Gl~G~li 95 (491)
|++|++.++|.....-.+ ||+.++. -|+ ..-+.||++.++.|++ +++|+|||+|..- .....+|.|.|+
T Consensus 565 GdtVrfiLTN~D~veDVi--HSF~IPs----lGI---K~DaiPGrtnsvtFta-dkPGvY~y~CSE~CGa~Hs~M~G~Vi 634 (638)
T 3sbq_A 565 GDEVTVTITNIDQIEDVS--HGFVVVN----HGV---SMEISPQQTSSITFVA-DKPGLHWYYCSWFCHALHMEMVGRMM 634 (638)
T ss_dssp TCEEEEEEEECCCSTTCC--EEEEETT----TTE---EEEECTTCEEEEEEEC-CSCEEEEEECCSCCSTTCTTCEEEEE
T ss_pred CceeEEEEecCCcCCCce--eeeEecC----CCc---eeeeCCCCeEEEEEEc-CCCEEEEEECCCcCCCCcccceEEEE
Confidence 577888899964322233 3333211 111 1237899999999999 6999999999853 222357999999
Q ss_pred EecC
Q 011178 96 IASR 99 (491)
Q Consensus 96 V~~~ 99 (491)
|+++
T Consensus 635 VEPa 638 (638)
T 3sbq_A 635 VEPA 638 (638)
T ss_dssp EECC
T ss_pred EecC
Confidence 9863
No 119
>3tu6_A Pseudoazurin (blue copper protein); cupredoxins, beta barrel, electron transfer, redox, electron transport; 2.00A {Sinorhizobium meliloti}
Probab=97.33 E-value=0.00031 Score=58.89 Aligned_cols=74 Identities=12% Similarity=-0.022 Sum_probs=50.1
Q ss_pred EEeecCCcEEEEEEEcCCCCCCceeccCCCeEEEeeccCCCCCCCCCCcccCCCCceeeEEeCCCCEEEEEEEccCccee
Q 011178 364 VMAADFRGFAEVVFENPEDTLQSWHIDGHNFFAVGMDGGEWTPASRLTYNLRDTISRCTVQVYPKSWTAVYVPLDNVGMW 443 (491)
Q Consensus 364 ~~~~~~g~~v~~~i~N~~~~~HP~HlHG~~F~Vl~~g~g~~~~~~~~~~~~~~p~~rDTv~v~p~~~~~irf~adnpG~w 443 (491)
.++++.|++|.|++.|. .|-+..+.. .+ ++.. ..+.+.||+...+.| +.||.|
T Consensus 24 ~i~V~~GDtVtf~n~~~---~H~v~~~~~----------~~-P~g~-----------~~f~s~pGet~s~TF--~~pG~y 76 (127)
T 3tu6_A 24 VIRAQPGDTVTFVAKDK---GHNSALMKG----------GA-PEGA-----------ETWKGKINEEITVTL--SKPGVY 76 (127)
T ss_dssp EEEECTTCEEEEECSSS---SCCCEECTT----------CS-CTTC-----------CCCBCCTTCCCEEEC--CSCEEE
T ss_pred EEEECCCCEEEEEECCC---CceEEEccC----------cC-CCCc-----------cceecCCCCEEEEEe--CCCeEE
Confidence 46889999999987763 455544321 01 1100 112234677655555 899999
Q ss_pred eeeecchhhhhcceEEEEEEecC
Q 011178 444 NIRSENWARQYLGQQFYLRVYSS 466 (491)
Q Consensus 444 ~~HCHil~H~d~GMm~~~~V~~~ 466 (491)
.|||-. |..+||...+.|.++
T Consensus 77 ~y~C~~--H~~~GM~G~I~V~~~ 97 (127)
T 3tu6_A 77 MYQCAP--HVGMGMIGAIVVGEP 97 (127)
T ss_dssp EEECTT--TGGGTCEEEEEESSC
T ss_pred EEEeCC--CCcCCcEEEEEECcC
Confidence 999994 999999999999865
No 120
>1iuz_A Plastocyanin; electron transport; 1.60A {Ulva pertusa} SCOP: b.6.1.1 PDB: 7pcy_A
Probab=97.32 E-value=0.00093 Score=53.21 Aligned_cols=80 Identities=16% Similarity=0.089 Sum_probs=55.1
Q ss_pred eEEeecCCcEEEEEEEcCCCCCCceeccCCCeEEEeeccCCCCCCCCCCcccCCCCceeeEEeCCCCEEEEEEEccCcce
Q 011178 363 SVMAADFRGFAEVVFENPEDTLQSWHIDGHNFFAVGMDGGEWTPASRLTYNLRDTISRCTVQVYPKSWTAVYVPLDNVGM 442 (491)
Q Consensus 363 ~~~~~~~g~~v~~~i~N~~~~~HP~HlHG~~F~Vl~~g~g~~~~~~~~~~~~~~p~~rDTv~v~p~~~~~irf~adnpG~ 442 (491)
..+.++.|+.|.|+ |.+...|-+.+.... +. + ..+. ...-.+...+.+|+...+.| +.||.
T Consensus 18 ~~i~v~~GdtV~~~--n~~~~~H~v~~~~~~----------~p-~---g~~~-~~~~~~~~~~~~g~~~~~tf--~~~G~ 78 (98)
T 1iuz_A 18 SKISVAAGEAIEFV--NNAGFPHNIVFDEDA----------VP-A---GVDA-DAISYDDYLNSKGETVVRKL--STPGV 78 (98)
T ss_dssp SEEEECTTCEEEEE--ECSSCCEEEEECTTS----------SC-T---TCCH-HHHCEEEEECSTTCEEEEEC--CSCEE
T ss_pred CEEEECCCCEEEEE--ECCCCCEEEEEeCCC----------Cc-c---cccc-ccccccccccCCCCEEEEEc--CCCEE
Confidence 35788999999886 666667876655311 10 0 0000 00113456788999888766 79999
Q ss_pred eeeeecchhhhhcceEEEEEE
Q 011178 443 WNIRSENWARQYLGQQFYLRV 463 (491)
Q Consensus 443 w~~HCHil~H~d~GMm~~~~V 463 (491)
+.|+|-+ |..+||-..+.|
T Consensus 79 y~y~C~~--H~~~gM~G~I~V 97 (98)
T 1iuz_A 79 YGVYCEP--HAGAGMKMTITV 97 (98)
T ss_dssp EEEECTT--TGGGTCEEEEEE
T ss_pred EEEEchh--hccCCCEEEEEE
Confidence 9999987 999999999887
No 121
>1id2_A Amicyanin; beta barrel, type-1 blue copper protein, electron transfer protein, electron transport; 2.15A {Paracoccus versutus} SCOP: b.6.1.1
Probab=97.29 E-value=0.00062 Score=55.19 Aligned_cols=71 Identities=11% Similarity=-0.089 Sum_probs=49.6
Q ss_pred EEeecCCcEEEEEEEcCCCCCCceeccCCCeEEEeeccCCCCCCCCCCcccCCCCceeeEEeCCCCEEEEEEEccCccee
Q 011178 364 VMAADFRGFAEVVFENPEDTLQSWHIDGHNFFAVGMDGGEWTPASRLTYNLRDTISRCTVQVYPKSWTAVYVPLDNVGMW 443 (491)
Q Consensus 364 ~~~~~~g~~v~~~i~N~~~~~HP~HlHG~~F~Vl~~g~g~~~~~~~~~~~~~~p~~rDTv~v~p~~~~~irf~adnpG~w 443 (491)
.+.++.|+.|.|+ |.+...|-+++.... .+. . ..++-.+.+|+...+.| +.||.+
T Consensus 35 ~i~V~~G~tV~~~--N~d~~~H~v~~~~~~-------~~~------~--------~~~s~~l~~g~~~~~tf--~~~G~y 89 (106)
T 1id2_A 35 EVTIKAGETVYWV--NGEVMPHNVAFKKGI-------VGE------D--------AFRGEMMTKDQAYAITF--NEAGSY 89 (106)
T ss_dssp EEEECTTCEEEEE--ECSSSCBCCEECTTT-------SSS------S--------CEECCCBCTTEEEEEEE--CSCEEE
T ss_pred EEEECCCCEEEEE--ECCCCcEEEEEeCCC-------CCc------c--------cccccccCCCCEEEEEe--CCCEEE
Confidence 3678999999887 776667877664321 000 0 01333467888777776 799999
Q ss_pred eeeecchhhhhcceEEEEEE
Q 011178 444 NIRSENWARQYLGQQFYLRV 463 (491)
Q Consensus 444 ~~HCHil~H~d~GMm~~~~V 463 (491)
.|+|-+ |. ||...+.|
T Consensus 90 ~~~C~~--H~--~M~G~I~V 105 (106)
T 1id2_A 90 DYFCTP--HP--FMRGKVIV 105 (106)
T ss_dssp EEECSS--CT--TCEEEEEE
T ss_pred EEEeCC--CC--CCEEEEEE
Confidence 999988 65 99999887
No 122
>3erx_A Pseudoazurin; copper protein, high-resolution, E transport, metal-binding, transport; 1.25A {Paracoccus pantotrophus} SCOP: b.6.1.1 PDB: 1adw_A
Probab=97.28 E-value=0.00073 Score=56.30 Aligned_cols=73 Identities=10% Similarity=0.049 Sum_probs=51.1
Q ss_pred EEeecCCcEEEEEEEcCCCCCCceeccCCCeEEEeeccCCCCCCCCCCcccCCCCceeeEEeCCCCEEEEEEEccCccee
Q 011178 364 VMAADFRGFAEVVFENPEDTLQSWHIDGHNFFAVGMDGGEWTPASRLTYNLRDTISRCTVQVYPKSWTAVYVPLDNVGMW 443 (491)
Q Consensus 364 ~~~~~~g~~v~~~i~N~~~~~HP~HlHG~~F~Vl~~g~g~~~~~~~~~~~~~~p~~rDTv~v~p~~~~~irf~adnpG~w 443 (491)
.++++.|++|.|++.|. .|-+.++.. .+ ++.. +.+.+.|++...+.| +.||.|
T Consensus 22 ~i~V~~GdtV~f~~~~~---~H~v~~~~~----------~~-P~g~-----------~~f~~~pg~t~s~TF--~~pG~y 74 (123)
T 3erx_A 22 FVRAEPGDVINFVPTDK---SHNVEAIKE----------IL-PEGV-----------ESFKSKINESYTLTV--TEPGLY 74 (123)
T ss_dssp EEEECTTEEEEEEESST---TCCCEECTT----------SS-CTTC-----------CCCBCCTTCCEEEEE--CSCEEE
T ss_pred EEEECCCCEEEEEECCC---CceEEEcCC----------cC-CCCc-----------cceecCCCCEEEEEe--CCCeEE
Confidence 47889999999998873 355554321 11 0000 112235777777666 899999
Q ss_pred eeeecchhhhhcceEEEEEEec
Q 011178 444 NIRSENWARQYLGQQFYLRVYS 465 (491)
Q Consensus 444 ~~HCHil~H~d~GMm~~~~V~~ 465 (491)
.|+|- .|...||-..+.|.+
T Consensus 75 ~y~C~--~H~~~GM~G~I~V~~ 94 (123)
T 3erx_A 75 GVKCT--PHFGMGMVGLVQVGD 94 (123)
T ss_dssp EEECG--GGTTTTCEEEEEESS
T ss_pred EEEeC--CCCcCCcEEEEEECC
Confidence 99999 599999999999986
No 123
>3c75_A Amicyanin; copper proteins, electron transfer complex, TTQ, electron transport, oxidoreductase, periplasm, transport, metal- binding; HET: TRQ; 2.50A {Paracoccus versutus}
Probab=97.16 E-value=0.00086 Score=56.69 Aligned_cols=71 Identities=11% Similarity=-0.070 Sum_probs=50.5
Q ss_pred EEeecCCcEEEEEEEcCCCCCCceeccCCCeEEEeeccCCCCCCCCCCcccCCCCceeeEEeCCCCEEEEEEEccCccee
Q 011178 364 VMAADFRGFAEVVFENPEDTLQSWHIDGHNFFAVGMDGGEWTPASRLTYNLRDTISRCTVQVYPKSWTAVYVPLDNVGMW 443 (491)
Q Consensus 364 ~~~~~~g~~v~~~i~N~~~~~HP~HlHG~~F~Vl~~g~g~~~~~~~~~~~~~~p~~rDTv~v~p~~~~~irf~adnpG~w 443 (491)
.+.++.|+.|.|+ |.+...|-+++.... .|. . .-++-.+.+|+...+.| +.||.+
T Consensus 61 ~i~V~~GdtV~~~--N~d~~~H~v~~~~~~-------~g~-------------~-~~~s~~l~pG~t~~~tF--~~~G~y 115 (132)
T 3c75_A 61 EVTIKAGETVYWV--NGEVMPHNVAFKKGI-------VGE-------------D-AFRGEMMTKDQAYAITF--NEAGSY 115 (132)
T ss_dssp EEEECTTCEEEEE--ECSSSCBCCEECTTT-------SSS-------------S-CEECCCBCTTEEEEEEE--CSCEEE
T ss_pred EEEECCCCEEEEE--ECCCCceEEEEeCCC-------CCc-------------c-cccccccCCCCEEEEEc--CCCEEE
Confidence 4678999999886 777677877764321 000 0 11333567888877776 789999
Q ss_pred eeeecchhhhhcceEEEEEE
Q 011178 444 NIRSENWARQYLGQQFYLRV 463 (491)
Q Consensus 444 ~~HCHil~H~d~GMm~~~~V 463 (491)
.|||-+ |. ||...+.|
T Consensus 116 ~y~C~~--H~--gM~G~I~V 131 (132)
T 3c75_A 116 DYFCTP--HP--FMRGKVIV 131 (132)
T ss_dssp EEECSS--CT--TCEEEEEE
T ss_pred EEEeCC--Cc--CCEEEEEE
Confidence 999987 66 99999887
No 124
>1paz_A Pseudoazurin precursor; electron transfer(cuproprotein); 1.55A {Alcaligenes faecalis} SCOP: b.6.1.1 PDB: 1pza_A 1pzb_A 1pzc_A 2p80_D 3nyk_A 3paz_A 8paz_A 4paz_A 5paz_A 6paz_A 7paz_A 1py0_A*
Probab=96.56 E-value=0.0092 Score=49.58 Aligned_cols=73 Identities=7% Similarity=-0.022 Sum_probs=47.7
Q ss_pred EEeecCCcEEEEEEEcCCCCCCceeccCCCeEEEeeccCCCCCCCCCCcccCCCCceeeEEeCCCCEEEEEEEccCccee
Q 011178 364 VMAADFRGFAEVVFENPEDTLQSWHIDGHNFFAVGMDGGEWTPASRLTYNLRDTISRCTVQVYPKSWTAVYVPLDNVGMW 443 (491)
Q Consensus 364 ~~~~~~g~~v~~~i~N~~~~~HP~HlHG~~F~Vl~~g~g~~~~~~~~~~~~~~p~~rDTv~v~p~~~~~irf~adnpG~w 443 (491)
.++++.|++|.|+..+. .|-+.++- +.. ++... .+.+.+|+...+. ++.||.|
T Consensus 22 ~i~V~~GdtV~f~~~~~---~H~v~~~~----------~~~-p~~~~-----------~~~~~pG~t~~~t--F~~~G~y 74 (123)
T 1paz_A 22 YIKANPGDTVTFIPVDK---GHNVESIK----------DMI-PEGAE-----------KFKSKINENYVLT--VTQPGAY 74 (123)
T ss_dssp EEEECTTCEEEEEESSS---SCCCEECT----------TCS-CTTCC-----------CCBCCTTCCEEEE--CCSCEEE
T ss_pred EEEECCCCEEEEEECCC---CeEEEEec----------ccC-CCCcc-----------ceecCCCCEEEEE--eCCCEEE
Confidence 46789999998876653 35554431 100 11000 1123467765554 4889999
Q ss_pred eeeecchhhhhcceEEEEEEec
Q 011178 444 NIRSENWARQYLGQQFYLRVYS 465 (491)
Q Consensus 444 ~~HCHil~H~d~GMm~~~~V~~ 465 (491)
.|+|-. |...||...+.|.+
T Consensus 75 ~y~C~~--H~~~gM~G~I~V~~ 94 (123)
T 1paz_A 75 LVKCTP--HYAMGMIALIAVGD 94 (123)
T ss_dssp EEECTT--TGGGTCEEEEEESS
T ss_pred EEEeCC--cccCCCEEEEEEcC
Confidence 999984 99999999999976
No 125
>1pmy_A Pseudoazurin; electron transfer(cuproprotein); 1.50A {Methylobacterium extorquens} SCOP: b.6.1.1
Probab=96.42 E-value=0.0057 Score=50.83 Aligned_cols=37 Identities=14% Similarity=0.141 Sum_probs=30.5
Q ss_pred eCCCCEEEEEEEccCcceeeeeecchhhhhcceEEEEEEec
Q 011178 425 VYPKSWTAVYVPLDNVGMWNIRSENWARQYLGQQFYLRVYS 465 (491)
Q Consensus 425 v~p~~~~~irf~adnpG~w~~HCHil~H~d~GMm~~~~V~~ 465 (491)
+.+|+...+.| +.||.|.|+|-. |...||...+.|.+
T Consensus 58 ~~pG~t~~~tF--~~~G~y~y~C~~--H~~~gM~G~I~V~~ 94 (123)
T 1pmy_A 58 TTVGQEAVVKF--DKEGVYGFKCAP--HYMMGMVALVVVGD 94 (123)
T ss_dssp CCTTSCEEEEC--CSCEEEEEECST--TTTTTCEEEEEESS
T ss_pred cCCCCEEEEEe--CCCeEEEEEeCC--ccccCCEEEEEEcC
Confidence 35777655555 789999999985 99999999999975
No 126
>3sbq_A Nitrous-oxide reductase; beta-propeller, cupredoxin domain, copper-contain periplasmic, oxidoreductase; 1.70A {Pseudomonas stutzeri} PDB: 3sbp_A 3sbr_A 1qni_A
Probab=96.41 E-value=0.01 Score=61.51 Aligned_cols=75 Identities=11% Similarity=0.122 Sum_probs=59.2
Q ss_pred eEEeecCCcEEEEEEEcCC---CCCCceeccCCCeEEEeeccCCCCCCCCCCcccCCCCceeeEEeCCCCEEEEEEEccC
Q 011178 363 SVMAADFRGFAEVVFENPE---DTLQSWHIDGHNFFAVGMDGGEWTPASRLTYNLRDTISRCTVQVYPKSWTAVYVPLDN 439 (491)
Q Consensus 363 ~~~~~~~g~~v~~~i~N~~---~~~HP~HlHG~~F~Vl~~g~g~~~~~~~~~~~~~~p~~rDTv~v~p~~~~~irf~adn 439 (491)
..+.++.|+.|+|++.|.+ +..|-|-+.+... -+.+.||....+.|.++.
T Consensus 558 ~eI~VP~GdtVrfiLTN~D~veDViHSF~IPslGI---------------------------K~DaiPGrtnsvtFtadk 610 (638)
T 3sbq_A 558 QEFTVKQGDEVTVTITNIDQIEDVSHGFVVVNHGV---------------------------SMEISPQQTSSITFVADK 610 (638)
T ss_dssp CEEEEETTCEEEEEEEECCCSTTCCEEEEETTTTE---------------------------EEEECTTCEEEEEEECCS
T ss_pred CEEEEecCceeEEEEecCCcCCCceeeeEecCCCc---------------------------eeeeCCCCeEEEEEEcCC
Confidence 4577999999999999974 4667776654321 125678999999999999
Q ss_pred cceeeeeecchhhh-hcceEEEEEEe
Q 011178 440 VGMWNIRSENWARQ-YLGQQFYLRVY 464 (491)
Q Consensus 440 pG~w~~HCHil~H~-d~GMm~~~~V~ 464 (491)
||.|.++|...-|. +.+|...+.|.
T Consensus 611 PGvY~y~CSE~CGa~Hs~M~G~ViVE 636 (638)
T 3sbq_A 611 PGLHWYYCSWFCHALHMEMVGRMMVE 636 (638)
T ss_dssp CEEEEEECCSCCSTTCTTCEEEEEEE
T ss_pred CEEEEEECCCcCCCCcccceEEEEEe
Confidence 99999999986664 57899999775
No 127
>3fsa_A Azurin; copper, cupredoxin fold, metal-binding, protein-protein interaction, metal binding protein; 0.98A {Pseudomonas aeruginosa} SCOP: b.6.1.1 PDB: 2xv2_A 2xv0_A 3fs9_A 2fta_A* 2hx7_A 2hx8_A 2hx9_A 2hxa_A 1cc3_A 2ft6_A 2ft7_A 2ft8_A 1azn_A 3n2j_A 2iwe_A 2ghz_A 2gi0_A 1jzg_A* 1azu_A* 1bex_A ...
Probab=96.27 E-value=0.025 Score=46.76 Aligned_cols=38 Identities=18% Similarity=0.326 Sum_probs=30.6
Q ss_pred CCCCCCeEEEEEEeC--CCccceeEeCCccccccCCceeEEEEe
Q 011178 56 PIPPGKNFTYVLQVK--DQIGSYFYFPSLAFHKAAGGYGGIKIA 97 (491)
Q Consensus 56 ~i~PG~~~~Y~f~~~--~~~Gt~wYH~H~~~q~~~Gl~G~liV~ 97 (491)
.|.||++++..|+.+ .++|+|.|-|- .+. ||.|.|+|.
T Consensus 86 ~l~pGes~~vtf~~~~l~~~G~y~f~C~--gH~--~M~G~v~V~ 125 (125)
T 3fsa_A 86 LIGSGEKDSVTFDVSKLKEGEQYMFFCA--AHA--AMKGTLTLK 125 (125)
T ss_dssp CBCTTCEEEEEEEGGGC---CCEEEECS--SST--TCEEEEEEC
T ss_pred eeCCCcEEEEEEeCcCcCCCccEEEEcC--CCC--CcEEEEEEC
Confidence 489999999999985 27999999999 344 899999984
No 128
>3ay2_A Lipid modified azurin protein; beta sandwich, bacterial protein, anticancer, anti-HIV/AIDS, antiparasitic activity, antitumor protein; 1.90A {Neisseria gonorrhoeae}
Probab=96.17 E-value=0.012 Score=51.38 Aligned_cols=90 Identities=3% Similarity=-0.078 Sum_probs=60.8
Q ss_pred Eee-cCCcEEEEEEEcCCCCC-----CceeccCCCeEEEeeccCCCCCC-------CCCCccc--CCCCceeeEEeCCCC
Q 011178 365 MAA-DFRGFAEVVFENPEDTL-----QSWHIDGHNFFAVGMDGGEWTPA-------SRLTYNL--RDTISRCTVQVYPKS 429 (491)
Q Consensus 365 ~~~-~~g~~v~~~i~N~~~~~-----HP~HlHG~~F~Vl~~g~g~~~~~-------~~~~~~~--~~p~~rDTv~v~p~~ 429 (491)
+++ +.|+.|.|+|.|.+..+ |- |-|...+. ++.. ....|-. .......|..|.||+
T Consensus 60 itV~kaG~~Vtv~~~N~g~~p~~~m~Hn-------~vi~~~~~--~~~v~~~~m~~~~~~~v~~~d~~vl~~t~~l~pGe 130 (167)
T 3ay2_A 60 IQVSKACKEFTITLKHTGTQPKASMGHN-------LVIAKAED--MDGVFKDGVGAADTDYVKPDDARVVAHTKLIGGGE 130 (167)
T ss_dssp EEEETTCSSEEEEEEECSCSCHHHHCBC-------CEEEEGGG--HHHHHHHHGGGGGGTTSCTTCTTEEEECCCBCTTC
T ss_pred EEEecCCCEEEEEEEECCCCccccccce-------EEeccCcc--hhhhHHHhhhccccccccccccchhccceeeCCCC
Confidence 688 89999999999998653 44 33332210 0000 0000000 011234567789999
Q ss_pred EEEEEEEcc--CcceeeeeecchhhhhcceEEEEEEe
Q 011178 430 WTAVYVPLD--NVGMWNIRSENWARQYLGQQFYLRVY 464 (491)
Q Consensus 430 ~~~irf~ad--npG~w~~HCHil~H~d~GMm~~~~V~ 464 (491)
...|.|.++ .||.+-|+|-+--|.. ||-..+.|.
T Consensus 131 t~svtf~~~~lkpG~Y~f~Ct~PgH~~-gM~G~i~V~ 166 (167)
T 3ay2_A 131 ESSLTLDPAKLADGDYKFACTFPGHGA-LMNGKVTLV 166 (167)
T ss_dssp EEEEEECGGGGTTSCEEEECCSTTGGG-TSEEEEEEE
T ss_pred EEEEEEecCCCCCcEEEEEcCCCCchh-cCEEEEEEe
Confidence 999999987 8999999999988888 899999885
No 129
>1cuo_A Protein (azurin ISO-2); beta barrel, periplasmic, electron transport; 1.60A {Methylomonas SP} SCOP: b.6.1.1 PDB: 1uat_A
Probab=95.90 E-value=0.05 Score=45.45 Aligned_cols=87 Identities=9% Similarity=-0.003 Sum_probs=61.0
Q ss_pred EEeecCC-cEEEEEEEcCCCCC-----CceeccCCCeEEEeecc-----------C---CCCCCCCCCcccCCCCceeeE
Q 011178 364 VMAADFR-GFAEVVFENPEDTL-----QSWHIDGHNFFAVGMDG-----------G---EWTPASRLTYNLRDTISRCTV 423 (491)
Q Consensus 364 ~~~~~~g-~~v~~~i~N~~~~~-----HP~HlHG~~F~Vl~~g~-----------g---~~~~~~~~~~~~~~p~~rDTv 423 (491)
.++++.| +.|.+++.|.+..+ |- |-|...+. + .|-+.. .......|.
T Consensus 19 ~i~V~~G~~~vtv~~~N~g~~~~~~m~H~-------~vi~~~~~~~~~~~~~m~~~~~~~~v~~~------~~~~~~~t~ 85 (129)
T 1cuo_A 19 SISVPASCAEFTVNFEHKGHMPKTGMGHN-------WVLAKSADVGDVAKEGAHAGADNNFVTPG------DKRVIAFTP 85 (129)
T ss_dssp EEEEETTCSEEEEEEEECSSSCHHHHCBC-------CEEEEGGGHHHHHHHHHTTCGGGTTSCTT------CTTCSEECC
T ss_pred eEEEcCCCeEEEEEEEECCCCcccccccc-------eEEecCcchhhhHHHhhhccccccccccc------cccceeeee
Confidence 4788999 99999999997543 54 33333221 0 010000 001233566
Q ss_pred EeCCCCEEEEEEEcc---CcceeeeeecchhhhhcceEEEEEEe
Q 011178 424 QVYPKSWTAVYVPLD---NVGMWNIRSENWARQYLGQQFYLRVY 464 (491)
Q Consensus 424 ~v~p~~~~~irf~ad---npG~w~~HCHil~H~d~GMm~~~~V~ 464 (491)
.|.||+...+.|.++ .||.+-|.|-+--|.. ||-..+.|.
T Consensus 86 ~l~pGet~svtf~~~~~~~~G~Y~f~C~~pgH~~-~M~G~i~V~ 128 (129)
T 1cuo_A 86 IIGGGEKTSVKFKVSALSKDEAYTYFCSYPGHFS-MMRGTLKLE 128 (129)
T ss_dssp CBCTTCEEEEEEEGGGCCTTSCEEEECCSTTCTT-TSEEEEEEE
T ss_pred EECCCCEEEEEEeccccCCCceEEEEeCCCCchH-cCEEEEEEe
Confidence 789999999999997 8999999999888888 899999885
No 130
>2cua_A Protein (CUA); CUA center, electron transport; 1.60A {Thermus thermophilus} SCOP: b.6.1.2 PDB: 2fwl_B*
Probab=95.88 E-value=0.016 Score=48.96 Aligned_cols=69 Identities=13% Similarity=0.128 Sum_probs=44.9
Q ss_pred EeeeEEEEEEecCCCCCeeeecccCCCCCCCCCCCCCCCCCCCCCCeEEEEEEeCCCccceeEeCCcc-ccccCCceeEE
Q 011178 16 THLYTHLVVLNFIYMAPLITLNGVQQRRNSWQDGVYGTNCPIPPGKNFTYVLQVKDQIGSYFYFPSLA-FHKAAGGYGGI 94 (491)
Q Consensus 16 v~d~v~i~~~N~l~~~~siH~HG~~~~~~~~~DG~~~~q~~i~PG~~~~Y~f~~~~~~Gt~wYH~H~~-~q~~~Gl~G~l 94 (491)
.|++|++.++|. +. .|++..+. -|. ..-+.||+.-++.|++ +++|+|+|+|..- .....+|.|-+
T Consensus 66 ~G~~V~~~vts~-DV-----~Hsf~ip~----~~~---k~d~~PG~~~~~~~~~-~~~G~y~~~C~e~CG~~H~~M~g~v 131 (135)
T 2cua_A 66 QGAEIVFKITSP-DV-----IHGFHVEG----TNI---NVEVLPGEVSTVRYTF-KRPGEYRIICNQYCGLGHQNMFGTI 131 (135)
T ss_dssp TTSEEEEEEEBS-SS-----CEEEEETT----SSC---EEEECBTBCEEEEEEC-CSCEEEEEECCSCCSTTSTTCEEEE
T ss_pred CCCEEEEEEEeC-Cc-----cceEEecC----CCc---eeEeCCCCcEEEEEEc-CCCEEEEEECcccCCCCcCCCEEEE
Confidence 356777778876 22 34554321 111 1236799999999998 6999999999531 11225899999
Q ss_pred EEec
Q 011178 95 KIAS 98 (491)
Q Consensus 95 iV~~ 98 (491)
+|.+
T Consensus 132 ~V~~ 135 (135)
T 2cua_A 132 VVKE 135 (135)
T ss_dssp EEEC
T ss_pred EEEC
Confidence 9864
No 131
>2cua_A Protein (CUA); CUA center, electron transport; 1.60A {Thermus thermophilus} SCOP: b.6.1.2 PDB: 2fwl_B*
Probab=95.81 E-value=0.034 Score=46.89 Aligned_cols=70 Identities=16% Similarity=0.195 Sum_probs=51.2
Q ss_pred EeecCCcEEEEEEEcCCCCCCceeccCCCeEEEeeccCCCCCCCCCCcccCCCCceeeEEeCCCCEEEEEEEccCcceee
Q 011178 365 MAADFRGFAEVVFENPEDTLQSWHIDGHNFFAVGMDGGEWTPASRLTYNLRDTISRCTVQVYPKSWTAVYVPLDNVGMWN 444 (491)
Q Consensus 365 ~~~~~g~~v~~~i~N~~~~~HP~HlHG~~F~Vl~~g~g~~~~~~~~~~~~~~p~~rDTv~v~p~~~~~irf~adnpG~w~ 444 (491)
+.++.|+.|+|++.|.+ ..|- |.|-+. + --+.+.||....+.|.++.||.+.
T Consensus 62 l~Vp~G~~V~~~vts~D-V~Hs-------f~ip~~-------------~-------~k~d~~PG~~~~~~~~~~~~G~y~ 113 (135)
T 2cua_A 62 IEVPQGAEIVFKITSPD-VIHG-------FHVEGT-------------N-------INVEVLPGEVSTVRYTFKRPGEYR 113 (135)
T ss_dssp EEEETTSEEEEEEEBSS-SCEE-------EEETTS-------------S-------CEEEECBTBCEEEEEECCSCEEEE
T ss_pred EEEcCCCEEEEEEEeCC-ccce-------EEecCC-------------C-------ceeEeCCCCcEEEEEEcCCCEEEE
Confidence 57889999999999975 4343 433111 1 013456788889999999999999
Q ss_pred eeecc---hhhhhcceEEEEEEe
Q 011178 445 IRSEN---WARQYLGQQFYLRVY 464 (491)
Q Consensus 445 ~HCHi---l~H~d~GMm~~~~V~ 464 (491)
++|.. ..| .+|-..++|.
T Consensus 114 ~~C~e~CG~~H--~~M~g~v~V~ 134 (135)
T 2cua_A 114 IICNQYCGLGH--QNMFGTIVVK 134 (135)
T ss_dssp EECCSCCSTTS--TTCEEEEEEE
T ss_pred EECcccCCCCc--CCCEEEEEEE
Confidence 99976 345 5888888875
No 132
>2ux6_A Pseudoazurin; type-1 copper, metal-binding, redox potential, copper, transport, cupredoxin, periplasmic, electron transport; 1.3A {Achromobacter cycloclastes} PDB: 2ux7_A 2uxf_A 2uxg_A 1bqk_A 1bqr_A 1zia_A 1zib_A 2jkw_A
Probab=95.57 E-value=0.028 Score=46.50 Aligned_cols=71 Identities=6% Similarity=-0.024 Sum_probs=46.0
Q ss_pred EEeecCCcEEEEEEEcCCCCCCceeccCCCeEEEeeccCCCCCCCCCCcccCCCCceeeEEeCCCCEEEEEEEccCccee
Q 011178 364 VMAADFRGFAEVVFENPEDTLQSWHIDGHNFFAVGMDGGEWTPASRLTYNLRDTISRCTVQVYPKSWTAVYVPLDNVGMW 443 (491)
Q Consensus 364 ~~~~~~g~~v~~~i~N~~~~~HP~HlHG~~F~Vl~~g~g~~~~~~~~~~~~~~p~~rDTv~v~p~~~~~irf~adnpG~w 443 (491)
.+.++.|++|.|+.. +. .|-+++.. +.+.. .. ..+.+.+|+...+.| +.||.|
T Consensus 22 ~i~V~~GdtV~f~n~--d~-~H~v~~~~----------~~~p~-~~-----------~~~~~~~g~t~~~tF--~~~G~y 74 (122)
T 2ux6_A 22 SLKVAPGDTVTFIPT--DK-GHNVETIK----------GMIPD-GA-----------EAFKSKINENYKVTF--TAPGVY 74 (122)
T ss_dssp EEEECTTEEEEEEES--SS-SCCCEECT----------TCSCT-TC-----------CCCBCCTTCCEEEEE--CSCEEE
T ss_pred EEEECCCCEEEEEEC--CC-CcEEEEcc----------cccCC-Cc-----------ceeecCCCCEEEEEe--CCCEEE
Confidence 467899999988744 32 46665543 11110 00 011234677766666 789999
Q ss_pred eeeecchhhhhcceEEEEEEec
Q 011178 444 NIRSENWARQYLGQQFYLRVYS 465 (491)
Q Consensus 444 ~~HCHil~H~d~GMm~~~~V~~ 465 (491)
.|+|-+ |.. |...+.|.+
T Consensus 75 ~y~C~~--H~~--M~G~I~V~~ 92 (122)
T 2ux6_A 75 GVKCTP--HPF--MVGVVQVGD 92 (122)
T ss_dssp EEEETT--EEE--EEEEEEESS
T ss_pred EEEeCC--Ccc--CEEEEEEeC
Confidence 999987 655 999999976
No 133
>2iaa_C Azurin; quinoprotein, tryptophan tryptophylquinone, cupredoxin, electron transfer, oxidoreductase/electron transport comple; HET: TRQ; 1.95A {Alcaligenes faecalis} PDB: 2h47_C* 2h3x_C*
Probab=95.13 E-value=0.081 Score=44.09 Aligned_cols=91 Identities=5% Similarity=-0.096 Sum_probs=60.3
Q ss_pred EEee-cCCcEEEEEEEcCCCCC-----CceeccCCCeEEEeeccCCCCC--------CCCCCccc-CC-CCceeeEEeCC
Q 011178 364 VMAA-DFRGFAEVVFENPEDTL-----QSWHIDGHNFFAVGMDGGEWTP--------ASRLTYNL-RD-TISRCTVQVYP 427 (491)
Q Consensus 364 ~~~~-~~g~~v~~~i~N~~~~~-----HP~HlHG~~F~Vl~~g~g~~~~--------~~~~~~~~-~~-p~~rDTv~v~p 427 (491)
.+++ +.|+.|.+++.|.+..+ |-|-| ...+ .... .....|-. .+ .....|..|.|
T Consensus 18 ~i~V~k~G~~vtv~~~N~g~~p~~~m~Hn~vi-------~~~~--~~~~~~~~~m~~~~~~~~~~~~~~~~~~~t~~l~p 88 (128)
T 2iaa_C 18 SIVVDKTCKEFTINLKHTGKLPKAAMGHNVVV-------SKKS--DESAVATDGMKAGLNNDYVKAGDERVIAHTSVIGG 88 (128)
T ss_dssp EEEECTTCSEEEEEEEECSCSCHHHHCBCCEE-------EETT--HHHHHHHHHHHHCGGGTTSCTTCTTEEEECCCBCT
T ss_pred EEEEecCCcEEEEEEEECCCCcccCCCceEEE-------cccc--chhhHHHhhhhccccccccccccchhhccceeeCC
Confidence 3678 88999999999998653 65433 2211 0000 00000000 01 12345667899
Q ss_pred CCEEEEEEEcc--Ccce-eeeeecchhhhhcceEEEEEEe
Q 011178 428 KSWTAVYVPLD--NVGM-WNIRSENWARQYLGQQFYLRVY 464 (491)
Q Consensus 428 ~~~~~irf~ad--npG~-w~~HCHil~H~d~GMm~~~~V~ 464 (491)
|+...+.|.+. .+|. +-|.|-+--|.. ||-..+.|.
T Consensus 89 Ges~~vtf~~~~l~~G~~Y~f~C~~PgH~~-gM~G~i~V~ 127 (128)
T 2iaa_C 89 GETDSVTFDVSKLKEGEDYAFFCSFPGHWS-IMKGTIELG 127 (128)
T ss_dssp TCEEEEEEESSCCCTTCCEEEECCSTTCTT-TSEEEEEEC
T ss_pred CCEEEEEEeccccCCCceEEEEECCCChhH-CCEEEEEEe
Confidence 99999999998 8995 999999988888 899999885
No 134
>3s8f_B Cytochrome C oxidase subunit 2; complex IV, respiratory chain, lipid cubic phase, monoolein, peroxide, electron transport, proton pump; HET: HEM HAS OLC; 1.80A {Thermus thermophilus} PDB: 1ehk_B* 2qpd_B* 3qjq_B* 3qjr_B* 3qju_B* 3qjv_B* 1xme_B* 3s8g_B* 4esl_B* 4ev3_B* 4f05_B* 4fa7_B* 4faa_B* 3qjs_B* 3bvd_B* 2qpe_B* 3qjt_B* 3s3b_B* 3s33_B* 3s39_B* ...
Probab=94.95 E-value=0.047 Score=47.72 Aligned_cols=41 Identities=17% Similarity=0.181 Sum_probs=33.4
Q ss_pred CCCCCeEEEEEEeCCCccceeEeCCc-cccccCCceeEEEEec
Q 011178 57 IPPGKNFTYVLQVKDQIGSYFYFPSL-AFHKAAGGYGGIKIAS 98 (491)
Q Consensus 57 i~PG~~~~Y~f~~~~~~Gt~wYH~H~-~~q~~~Gl~G~liV~~ 98 (491)
+.||+.-+..|++ +++|+|++.|.. -.....+|.|-++|++
T Consensus 127 a~PG~~n~~~~~~-~kpG~y~g~Cse~CG~~Hs~M~g~V~V~e 168 (168)
T 3s8f_B 127 VLPGEVSTVRYTF-KRPGEYRIICNQYCGLGHQNMFGTIVVKE 168 (168)
T ss_dssp ECTTBCEEEEEEC-CSCEEEEEECCSCCSTTGGGCEEEEEEEC
T ss_pred ecCCceeEEEEEe-CCCEEEEEECCcCCCCCcCCCEEEEEEeC
Confidence 6799999999999 699999999983 2334467999999974
No 135
>2ccw_A Azurin II, AZN-2; electron transport (cuproprotein), alcaligenes xylosoxidans, electron transfer, cupredoxin, electron transport; 1.13A {Alcaligenes xylosoxydans} SCOP: b.6.1.1 PDB: 1dz0_A 1dyz_A 1aiz_A 1azb_A 1azc_A 1uri_A 2aza_A 1a4a_A 1a4b_A 1a4c_A
Probab=94.78 E-value=0.12 Score=43.07 Aligned_cols=91 Identities=7% Similarity=-0.117 Sum_probs=60.0
Q ss_pred EEee-cCCcEEEEEEEcCCCCC-----CceeccCCCeEEEeeccCCCCCC--------CCCCccc-CC-CCceeeEEeCC
Q 011178 364 VMAA-DFRGFAEVVFENPEDTL-----QSWHIDGHNFFAVGMDGGEWTPA--------SRLTYNL-RD-TISRCTVQVYP 427 (491)
Q Consensus 364 ~~~~-~~g~~v~~~i~N~~~~~-----HP~HlHG~~F~Vl~~g~g~~~~~--------~~~~~~~-~~-p~~rDTv~v~p 427 (491)
.+++ +.|+.|.+++.|.+..+ |-|- +...+. .... ....|-. .+ .....|..|.|
T Consensus 19 ~i~V~k~G~~vtv~~~N~g~~p~~~m~H~~v-------i~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~l~p 89 (129)
T 2ccw_A 19 EIVVDKSCKQFTMHLKHVGKMAKVAMGHNLV-------LTKDAD--KQAVATDGMGAGLAQDYVKAGDTRVIAHTKVIGG 89 (129)
T ss_dssp EEEECTTCSEEEEEEEECSCCCHHHHCBCCE-------EEEGGG--HHHHHHHHHHHCGGGTTSCTTCTTEEEECCCBCT
T ss_pred eEEEecCCCEEEEEEEECCCcccccCcceEE-------EcCccc--hhhhHHHhhhhcccccccccccccceeeeeEECC
Confidence 3788 88999999999998653 5433 332210 0000 0000000 01 12335667899
Q ss_pred CCEEEEEEEcc--Ccce-eeeeecchhhhhcceEEEEEEe
Q 011178 428 KSWTAVYVPLD--NVGM-WNIRSENWARQYLGQQFYLRVY 464 (491)
Q Consensus 428 ~~~~~irf~ad--npG~-w~~HCHil~H~d~GMm~~~~V~ 464 (491)
|+...+-|.++ .||. +-|.|-+--|.. ||-..+.|.
T Consensus 90 Get~svtf~~~~l~~G~~Y~f~C~~pgH~~-gM~G~i~V~ 128 (129)
T 2ccw_A 90 GESDSVTFDVSKIAAGENYAYFCSFPGHWA-MMKGTLKLG 128 (129)
T ss_dssp TCEEEEEEEGGGSCTTCCEEEECCSTTGGG-TSEEEEEEC
T ss_pred CCEEEEEEeccccCCCceEEEEeCCCChhH-cCEEEEEEe
Confidence 99999999998 7876 999999888888 899999885
No 136
>3s8f_B Cytochrome C oxidase subunit 2; complex IV, respiratory chain, lipid cubic phase, monoolein, peroxide, electron transport, proton pump; HET: HEM HAS OLC; 1.80A {Thermus thermophilus} PDB: 1ehk_B* 2qpd_B* 3qjq_B* 3qjr_B* 3qju_B* 3qjv_B* 1xme_B* 3s8g_B* 4esl_B* 4ev3_B* 4f05_B* 4fa7_B* 4faa_B* 3qjs_B* 3bvd_B* 2qpe_B* 3qjt_B* 3s3b_B* 3s33_B* 3s39_B* ...
Probab=94.58 E-value=0.15 Score=44.56 Aligned_cols=73 Identities=16% Similarity=0.217 Sum_probs=54.9
Q ss_pred EeecCCcEEEEEEEcCCCCCCceeccCCCeEEEeeccCCCCCCCCCCcccCCCCceeeEEeCCCCEEEEEEEccCcceee
Q 011178 365 MAADFRGFAEVVFENPEDTLQSWHIDGHNFFAVGMDGGEWTPASRLTYNLRDTISRCTVQVYPKSWTAVYVPLDNVGMWN 444 (491)
Q Consensus 365 ~~~~~g~~v~~~i~N~~~~~HP~HlHG~~F~Vl~~g~g~~~~~~~~~~~~~~p~~rDTv~v~p~~~~~irf~adnpG~w~ 444 (491)
+.++.|+.|++.+.|. +..|-|-+=... =-+.+-||....+.|.++.||.|.
T Consensus 95 l~VP~G~~Vr~~vTS~-DViHsf~IP~lg---------------------------ik~da~PG~~n~~~~~~~kpG~y~ 146 (168)
T 3s8f_B 95 IEVPQGAEIVFKITSP-DVIHGFHVEGTN---------------------------INVEVLPGEVSTVRYTFKRPGEYR 146 (168)
T ss_dssp EEEETTSEEEEEEECS-SSCEEEEETTSS---------------------------CEEEECTTBCEEEEEECCSCEEEE
T ss_pred EEEeCCCeEEEEEecC-CceEEEEECCCC---------------------------eEEEecCCceeEEEEEeCCCEEEE
Confidence 5688999999999997 455665542111 113355788889999999999999
Q ss_pred eeecc-hhhhhcceEEEEEEec
Q 011178 445 IRSEN-WARQYLGQQFYLRVYS 465 (491)
Q Consensus 445 ~HCHi-l~H~d~GMm~~~~V~~ 465 (491)
+.|.. --+.+.+|...+.|.+
T Consensus 147 g~Cse~CG~~Hs~M~g~V~V~e 168 (168)
T 3s8f_B 147 IICNQYCGLGHQNMFGTIVVKE 168 (168)
T ss_dssp EECCSCCSTTGGGCEEEEEEEC
T ss_pred EECCcCCCCCcCCCEEEEEEeC
Confidence 99996 3456789999998853
No 137
>1nwp_A Azurin; electron transport, cupredoxin, electron transfer; 1.60A {Pseudomonas putida} SCOP: b.6.1.1 PDB: 1nwo_A 1joi_A
Probab=94.15 E-value=0.24 Score=41.13 Aligned_cols=92 Identities=9% Similarity=-0.070 Sum_probs=59.5
Q ss_pred EEee-cCCcEEEEEEEcCCCCC-----CceeccCCCeEEEeeccC------CCCCCCCCCc-ccCC-CCceeeEEeCCCC
Q 011178 364 VMAA-DFRGFAEVVFENPEDTL-----QSWHIDGHNFFAVGMDGG------EWTPASRLTY-NLRD-TISRCTVQVYPKS 429 (491)
Q Consensus 364 ~~~~-~~g~~v~~~i~N~~~~~-----HP~HlHG~~F~Vl~~g~g------~~~~~~~~~~-~~~~-p~~rDTv~v~p~~ 429 (491)
.+++ +.|+.|.+++.|.+..+ |-|-| ...+.- .........| ...+ .....|-.|.||+
T Consensus 19 ~i~V~k~G~~vtv~~~N~g~~p~~~m~H~~vi-------~~~~~~~~~~~~~m~~~~~~~~~~~~~~~~~~~t~~l~pGe 91 (128)
T 1nwp_A 19 DIAIDKSCKTFTVELTHSGSLPKNVMGHNLVI-------SKEADMQPIATDGLSAGIDKQYLKDGDARVIAHTKVIGAGE 91 (128)
T ss_dssp EEEECTTCSEEEEEEEECSSCCHHHHCBCCEE-------EEGGGHHHHHHHHTTTCGGGTTSCTTCTTEEEECCCBCTTC
T ss_pred EEEEecCCCEEEEEEEECCCCcccCCCceEEE-------ccccchhhHHHHHhhccccccccccccchhheeeeeeCCCC
Confidence 3788 89999999999998553 65433 222100 0000000000 0001 1233555789999
Q ss_pred EEEEEEEcc--Ccce-eeeeecchhhhhcceEEEEEE
Q 011178 430 WTAVYVPLD--NVGM-WNIRSENWARQYLGQQFYLRV 463 (491)
Q Consensus 430 ~~~irf~ad--npG~-w~~HCHil~H~d~GMm~~~~V 463 (491)
...+.|.+. .||. +-|.|-+--|.. ||-..+.|
T Consensus 92 t~svtf~~~~l~~G~~Y~f~C~~PgH~~-gM~G~i~V 127 (128)
T 1nwp_A 92 KDSVTFDVSKLAAGEKYGFFCSFPGHIS-MMKGTVTL 127 (128)
T ss_dssp EEEEEEEGGGSCTTSCEEEECCSTTCGG-GSEEEEEE
T ss_pred EEEEEEeccccCCCceEEEEECCCChhH-CCEEEEEE
Confidence 999999997 7887 999999988888 89998877
No 138
>3fsa_A Azurin; copper, cupredoxin fold, metal-binding, protein-protein interaction, metal binding protein; 0.98A {Pseudomonas aeruginosa} SCOP: b.6.1.1 PDB: 2xv2_A 2xv0_A 3fs9_A 2fta_A* 2hx7_A 2hx8_A 2hx9_A 2hxa_A 1cc3_A 2ft6_A 2ft7_A 2ft8_A 1azn_A 3n2j_A 2iwe_A 2ghz_A 2gi0_A 1jzg_A* 1azu_A* 1bex_A ...
Probab=92.56 E-value=0.63 Score=38.29 Aligned_cols=92 Identities=12% Similarity=0.077 Sum_probs=58.1
Q ss_pred EEeecC-CcEEEEEEEcCCCCCCceeccCCCeEEEeeccCCCCC---C----C-CCCcc--cCCCCceeeEEeCCCCEEE
Q 011178 364 VMAADF-RGFAEVVFENPEDTLQSWHIDGHNFFAVGMDGGEWTP---A----S-RLTYN--LRDTISRCTVQVYPKSWTA 432 (491)
Q Consensus 364 ~~~~~~-g~~v~~~i~N~~~~~HP~HlHG~~F~Vl~~g~g~~~~---~----~-~~~~~--~~~p~~rDTv~v~p~~~~~ 432 (491)
-++++. |+.|.++|.|.+..+ --.=||.| ||.... .... + . ...|- -.......|..|.||+...
T Consensus 19 ~i~V~~~Ge~V~~~l~N~G~~p--~~~M~Hn~-Vl~~~~-~~~~~~~~~m~~~~~~~y~~~~d~~via~t~~l~pGes~~ 94 (125)
T 3fsa_A 19 AITVDKSCKQFTVNLSHPGNLP--KNVMGHNW-VLSTAA-DMQGVVTDGMASGLDKDYLKPDDSRVIAHTKLIGSGEKDS 94 (125)
T ss_dssp EEEECTTCSEEEEEEECCSSCC--HHHHCBCC-EEEEHH-HHHHHHHHHHHHCGGGTTSCTTCTTCCEECCCBCTTCEEE
T ss_pred EEEEecCCCEEEEEEEECCccc--ccccCceE-EEcccc-hHHHHHHHHHhcChhhccCCCCCccceeccceeCCCcEEE
Confidence 367875 999999999998542 00112344 444311 0000 0 0 00110 0123456788899999999
Q ss_pred EEEEcc---CcceeeeeecchhhhhcceEEEEEE
Q 011178 433 VYVPLD---NVGMWNIRSENWARQYLGQQFYLRV 463 (491)
Q Consensus 433 irf~ad---npG~w~~HCHil~H~d~GMm~~~~V 463 (491)
|-|.+. .+|.+-|-|- -|. ||-..+.|
T Consensus 95 vtf~~~~l~~~G~y~f~C~--gH~--~M~G~v~V 124 (125)
T 3fsa_A 95 VTFDVSKLKEGEQYMFFCA--AHA--AMKGTLTL 124 (125)
T ss_dssp EEEEGGGC---CCEEEECS--SST--TCEEEEEE
T ss_pred EEEeCcCcCCCccEEEEcC--CCC--CcEEEEEE
Confidence 999987 8999999999 688 99999887
No 139
>3isy_A Bsupi, intracellular proteinase inhibitor; intracellular proteinase inhibitor bsupi, beta sandwich, GRE structural genomics; HET: PG4; 2.61A {Bacillus subtilis}
Probab=88.43 E-value=4.1 Score=33.16 Aligned_cols=72 Identities=15% Similarity=0.376 Sum_probs=50.3
Q ss_pred CCCEE--EEEEEEcCCCCeEeEEEe-Cce--eEEEEecCccCC--------CCccCeEEEcCCceEEEEEEeCC--CCcc
Q 011178 160 QGKTY--RFRISNVGISTSINFRIQ-GHK--MLLVEVEGTHTL--------QNTYDSLDIHLGQSYSVLVRADQ--PPQG 224 (491)
Q Consensus 160 ~g~~~--rlR~iN~~~~~~~~~~i~-~~~--~~via~DG~~~~--------p~~~~~l~l~pGeR~dv~v~~~~--~~g~ 224 (491)
.|+.+ .|.+.|.+.. .+.|.+. |+. |.|...+|..+- ........|.|||...+-...++ .||.
T Consensus 16 ~g~~v~~~ltv~N~s~~-~v~l~f~Sgq~~Df~v~d~~G~~VwrwS~~~~FtQa~~~~tl~pGE~~~f~~~w~~~~~pG~ 94 (120)
T 3isy_A 16 EPEQIKFNMSLKNQSER-AIEFQFSTGQKFELVVYDSEHKERYRYSKEKMFTQAFQNLTLESGETYDFSDVWKEVPEPGT 94 (120)
T ss_dssp CSSCEEEEEEEEECSSS-CEEEEESSSCCEEEEEECTTCCEEEETTTTCCCCCCCEEEEECTTCEEEEEEEESSCCCSEE
T ss_pred CCCeEEEEEEEEcCCCC-cEEEEeCCCCEEEEEEECCCCCEEEEccccchhhhhhceEEECCCCEEEEEEEeCCCCCCcc
Confidence 55554 5778888875 6777774 444 445555576441 22457899999999999999984 5799
Q ss_pred eEEEEEee
Q 011178 225 YYIVISTR 232 (491)
Q Consensus 225 ~~i~~~~~ 232 (491)
|.+.+...
T Consensus 95 Ytl~a~l~ 102 (120)
T 3isy_A 95 YEVKVTFK 102 (120)
T ss_dssp EEEEEEEC
T ss_pred EEEEEEEE
Confidence 99987653
No 140
>3isy_A Bsupi, intracellular proteinase inhibitor; intracellular proteinase inhibitor bsupi, beta sandwich, GRE structural genomics; HET: PG4; 2.61A {Bacillus subtilis}
Probab=78.84 E-value=5.8 Score=32.23 Aligned_cols=63 Identities=13% Similarity=0.113 Sum_probs=44.8
Q ss_pred eEEEEEEecCCCCCeeeecccCC--------CC-C--CCCCCCCCCCC----CCCCCCeEEEEEEeCC--CccceeEeCC
Q 011178 19 YTHLVVLNFIYMAPLITLNGVQQ--------RR-N--SWQDGVYGTNC----PIPPGKNFTYVLQVKD--QIGSYFYFPS 81 (491)
Q Consensus 19 ~v~i~~~N~l~~~~siH~HG~~~--------~~-~--~~~DG~~~~q~----~i~PG~~~~Y~f~~~~--~~Gt~wYH~H 81 (491)
.+.++|+|..+.+.++.+.--.. .+ . -|+||-..+|. -|+||++.+|+...++ .+|+|..+.=
T Consensus 21 ~~~ltv~N~s~~~v~l~f~Sgq~~Df~v~d~~G~~VwrwS~~~~FtQa~~~~tl~pGE~~~f~~~w~~~~~pG~Ytl~a~ 100 (120)
T 3isy_A 21 KFNMSLKNQSERAIEFQFSTGQKFELVVYDSEHKERYRYSKEKMFTQAFQNLTLESGETYDFSDVWKEVPEPGTYEVKVT 100 (120)
T ss_dssp EEEEEEEECSSSCEEEEESSSCCEEEEEECTTCCEEEETTTTCCCCCCCEEEEECTTCEEEEEEEESSCCCSEEEEEEEE
T ss_pred EEEEEEEcCCCCcEEEEeCCCCEEEEEEECCCCCEEEEccccchhhhhhceEEECCCCEEEEEEEeCCCCCCccEEEEEE
Confidence 47789999999888877654321 11 1 23777655553 3999999999999973 4899988753
No 141
>1cyx_A CYOA; electron transport; 2.30A {Escherichia coli} SCOP: b.6.1.2 PDB: 1cyw_A
Probab=73.72 E-value=5.9 Score=35.39 Aligned_cols=77 Identities=12% Similarity=0.044 Sum_probs=54.6
Q ss_pred eEEeecCCcEEEEEEEcCCCCCCceeccCCCeEEEeeccCCCCCCCCCCcccCCCCceeeEEeCCCCEEEEEEEccCcce
Q 011178 363 SVMAADFRGFAEVVFENPEDTLQSWHIDGHNFFAVGMDGGEWTPASRLTYNLRDTISRCTVQVYPKSWTAVYVPLDNVGM 442 (491)
Q Consensus 363 ~~~~~~~g~~v~~~i~N~~~~~HP~HlHG~~F~Vl~~g~g~~~~~~~~~~~~~~p~~rDTv~v~p~~~~~irf~adnpG~ 442 (491)
+.+.++.|+.|++.|++.+ ..|- |+|-+-+ ...| +-||....+.|.++.||.
T Consensus 41 n~l~lP~g~~V~~~lTS~D-ViHS-------F~IP~lg-----------------vK~d---aiPGr~n~l~~~~~~pG~ 92 (205)
T 1cyx_A 41 NEIAFPANTPVYFKVTSNS-VMHS-------FFIPRLG-----------------SQIY---AMAGMQTRLHLIANEPGT 92 (205)
T ss_dssp SEEEEETTSCEEEEEEESS-SCEE-------EEEGGGT-----------------EEEE---ECTTCCEEEEECCSSSEE
T ss_pred ceEEEeCCCEEEEEEecCC-ceee-------EEecccC-----------------cEEE---ecCCceEEEEEEeCCCeE
Confidence 3467899999999999875 3344 4442221 1123 347888899999999999
Q ss_pred eeeeecchhhh-hcceEEEEEEe-cCC
Q 011178 443 WNIRSENWARQ-YLGQQFYLRVY-SSA 467 (491)
Q Consensus 443 w~~HCHil~H~-d~GMm~~~~V~-~~~ 467 (491)
|...|-.+-.. +..|-..++|+ +++
T Consensus 93 y~g~CsE~CG~~Hs~M~~~v~vv~~~~ 119 (205)
T 1cyx_A 93 YDGICAEICGPGHSGMKFKAIATPDRA 119 (205)
T ss_dssp EEEEECSCCSTTSTTCCEEEEEESSHH
T ss_pred EEEEcccccccchhhceEEEEEECCHH
Confidence 99999876544 56677778877 443
No 142
>3hb3_B Cytochrome C oxidase subunit 2; electron transfer, proton transfer, proton pumping, membrane protein, cell inner membrane, cell membrane, copper; HET: HEA LDA LMT; 2.25A {Paracoccus denitrificans} PDB: 1ar1_B* 3ehb_B* 1qle_B*
Probab=69.82 E-value=8 Score=36.77 Aligned_cols=78 Identities=9% Similarity=0.161 Sum_probs=56.3
Q ss_pred eEEeecCCcEEEEEEEcCCCCCCceeccCCCeEEEeeccCCCCCCCCCCcccCCCCceeeEEeCCCCEEEEEEEccCcce
Q 011178 363 SVMAADFRGFAEVVFENPEDTLQSWHIDGHNFFAVGMDGGEWTPASRLTYNLRDTISRCTVQVYPKSWTAVYVPLDNVGM 442 (491)
Q Consensus 363 ~~~~~~~g~~v~~~i~N~~~~~HP~HlHG~~F~Vl~~g~g~~~~~~~~~~~~~~p~~rDTv~v~p~~~~~irf~adnpG~ 442 (491)
+.+.++.|+.|++.+++.+ ..|-|.+=.. .=-+.+-||....+.|.++.||.
T Consensus 189 N~lvlP~g~~V~~~ltS~D-ViHsf~iP~l---------------------------g~k~daiPG~~n~~~~~~~~~G~ 240 (298)
T 3hb3_B 189 NPVVVPVGKKVLVQVTATD-VIHAWTIPAF---------------------------AVKQDAVPGRIAQLWFSVDQEGV 240 (298)
T ss_dssp SCEEEESSSEEEEEEEESS-SCEEEEEGGG---------------------------TEEEEECTTCCEEEEEECSSSEE
T ss_pred ceEEEEcCCEEEEEEEeCC-ccceeeEccc---------------------------CceEEecCCceEEEEEEeCCCEE
Confidence 3467899999999999975 4455544211 11123347888899999999999
Q ss_pred eeeeecchh-hhhcceEEEEEEecCCc
Q 011178 443 WNIRSENWA-RQYLGQQFYLRVYSSAN 468 (491)
Q Consensus 443 w~~HCHil~-H~d~GMm~~~~V~~~~~ 468 (491)
+...|.-+- .-|..|-..++|+++++
T Consensus 241 y~g~CsE~CG~~Hs~M~~~v~vvs~~~ 267 (298)
T 3hb3_B 241 YFGQCSELCGINHAYMPIVVKAVSQEK 267 (298)
T ss_dssp EEECCCSCCSTTTTSCCEEEEEECHHH
T ss_pred EEEEcccccCcCccCCeeEEEEEcHHH
Confidence 999999755 34677888888877653
No 143
>2f1e_A Protein APAG; APAG protein, xanthomonas axonopodis PV.citri, structural genomics, unknown function; NMR {Xanthomonas axonopodis PV}
Probab=66.62 E-value=4.7 Score=33.14 Aligned_cols=48 Identities=17% Similarity=0.167 Sum_probs=32.3
Q ss_pred EEEEEEecCCCCC---eeeecccCCCCCC---CCCCCCCCCCCCCCCCeEEEEE
Q 011178 20 THLVVLNFIYMAP---LITLNGVQQRRNS---WQDGVYGTNCPIPPGKNFTYVL 67 (491)
Q Consensus 20 v~i~~~N~l~~~~---siH~HG~~~~~~~---~~DG~~~~q~~i~PG~~~~Y~f 67 (491)
-.|++.|....+. +=||.=.+-.+.- .-+||.|.|.-|.||++|.|.=
T Consensus 33 Y~I~I~N~~~~~vQL~sRhW~Itd~~g~~~eV~G~GVVG~qP~L~PGe~f~YtS 86 (127)
T 2f1e_A 33 YSIRIQNAGAVPARLVARHWQITDGNGRTEQVDGEGVVGEQPWLRPGEAFHYTS 86 (127)
T ss_dssp EEEEEEECSSSCEEEEEEEEEEEETTSCEEEEEESSBTTBCCEECTTCEEEEEE
T ss_pred EEEEEEeCCCCCEEEEeceEEEEeCCCCEEEEECCCeecCCCcCCCCCceEEeC
Confidence 5788899877653 4677744322211 1367877888899999888853
No 144
>1xvs_A Protein APAG; MCSG APC26324, midwest center for structural genomics, structure initiative, PSI, structural genomics, unknown FUN; 2.01A {Vibrio cholerae} SCOP: b.1.23.1
Probab=64.20 E-value=4.8 Score=33.03 Aligned_cols=48 Identities=17% Similarity=0.118 Sum_probs=32.1
Q ss_pred EEEEEEecCCCCC---eeeecccCCCCCC---CCCCCCCCCCCCCCCCeEEEEE
Q 011178 20 THLVVLNFIYMAP---LITLNGVQQRRNS---WQDGVYGTNCPIPPGKNFTYVL 67 (491)
Q Consensus 20 v~i~~~N~l~~~~---siH~HG~~~~~~~---~~DG~~~~q~~i~PG~~~~Y~f 67 (491)
-.|++.|....+. +=||.=..-.+.- .-+||.|.|.-|.||++|.|.=
T Consensus 32 Y~I~I~N~~~~~vQL~sRhW~Itd~~g~~~eV~G~GVVG~qP~L~PGe~f~YtS 85 (126)
T 1xvs_A 32 YLITIKNLSSQTVQLMSRRWLITDADGKQTVVEGDGVVGEQPRIKANDEYTYSS 85 (126)
T ss_dssp EEEEEEECSSSCEEEEEEEEEEEETTCCEEEEEEESBTTBCCEECTTCEEEEEE
T ss_pred EEEEEEECCCCCEEEEecEEEEEeCCCCEEEEECCceEcCCCcCCCCCceEEeC
Confidence 5788889877653 4677744322210 1367777788899999888864
No 145
>2gsm_B Cytochrome C oxidase subunit 2; transmembrane protein complex, oxidoreductase; HET: DMU HEA TRD; 2.00A {Rhodobacter sphaeroides} SCOP: b.6.1.2 f.17.2.1 PDB: 3dtu_B* 3fye_B* 3fyi_B* 3omi_B* 3om3_B* 3oma_B* 3omn_B* 1m56_B* 1m57_B*
Probab=63.79 E-value=13 Score=34.73 Aligned_cols=78 Identities=10% Similarity=0.200 Sum_probs=55.4
Q ss_pred eEEeecCCcEEEEEEEcCCCCCCceeccCCCeEEEeeccCCCCCCCCCCcccCCCCceeeEEeCCCCEEEEEEEccCcce
Q 011178 363 SVMAADFRGFAEVVFENPEDTLQSWHIDGHNFFAVGMDGGEWTPASRLTYNLRDTISRCTVQVYPKSWTAVYVPLDNVGM 442 (491)
Q Consensus 363 ~~~~~~~g~~v~~~i~N~~~~~HP~HlHG~~F~Vl~~g~g~~~~~~~~~~~~~~p~~rDTv~v~p~~~~~irf~adnpG~ 442 (491)
+.+.++.|+.|++.+++.+ ..|-|-+= +-+ ...| +-||....+.|.++.||.
T Consensus 171 n~l~lP~g~~v~~~~tS~D-ViHsf~ip-------~l~-----------------~k~d---a~PG~~n~~~~~~~~~G~ 222 (262)
T 2gsm_B 171 TAMVVPVNKTVVVQVTGAD-VIHSWTVP-------AFG-----------------VKQD---AVPGRLAQLWFRAEREGI 222 (262)
T ss_dssp SCEEEETTSEEEEEEEESS-SCEEEEEG-------GGT-----------------EEEE---ECBTCCEEEEEECCSCEE
T ss_pred ceEEEecCCEEEEEEEECc-ccceeeec-------ccC-----------------ceEE---ecCCceeEEEEecCCcEE
Confidence 3467899999999999875 43544442 211 1234 336888889999999999
Q ss_pred eeeeecchhhh-hcceEEEEEEecCCc
Q 011178 443 WNIRSENWARQ-YLGQQFYLRVYSSAN 468 (491)
Q Consensus 443 w~~HCHil~H~-d~GMm~~~~V~~~~~ 468 (491)
+...|--+-.. +..|-..++|+++++
T Consensus 223 y~g~Cse~CG~~H~~M~~~v~vv~~~~ 249 (262)
T 2gsm_B 223 FFGQCSELCGISHAYMPITVKVVSEEA 249 (262)
T ss_dssp EEECCCSCCSTTGGGCCEEEEEECHHH
T ss_pred EEEEChHhcccCcccCeEEEEEEcHHH
Confidence 99999875544 667777888876643
No 146
>1xq4_A Protein APAG; all beta protein, structural genomics, protein structure initiative, PSI, northeast structural genomics consortium, NESG; 2.70A {Bordetella pertussis} SCOP: b.1.23.1
Probab=62.57 E-value=6.3 Score=32.91 Aligned_cols=48 Identities=17% Similarity=0.119 Sum_probs=32.3
Q ss_pred EEEEEEecCCCCC---eeeecccCCCCCC---CCCCCCCCCCCCCCCCeEEEEE
Q 011178 20 THLVVLNFIYMAP---LITLNGVQQRRNS---WQDGVYGTNCPIPPGKNFTYVL 67 (491)
Q Consensus 20 v~i~~~N~l~~~~---siH~HG~~~~~~~---~~DG~~~~q~~i~PG~~~~Y~f 67 (491)
-.|++.|....+. +=||.=.+..+.- .-+||.|.|.-|.||++|.|.=
T Consensus 37 Y~ItI~N~~~~~vQL~sRhW~ItD~~G~~~eV~G~GVVGeqPvL~PGe~F~YtS 90 (139)
T 1xq4_A 37 YTVRITNTGSHPAQVISRHWIITDGEERVQEVRGLGVVGQQPLLAPGETFEYTS 90 (139)
T ss_dssp EEEEEEECSSSCEEEEEEEEEEECTTSCEEEEEEESSSSCCCEECTTCEEEEEE
T ss_pred EEEEEEeCCCCCEEEEecEEEEEeCCCCEEEEECCCeecCCCcCCCCCceEEcC
Confidence 5788899877653 4677644422211 1367777788899999888864
No 147
>1cyx_A CYOA; electron transport; 2.30A {Escherichia coli} SCOP: b.6.1.2 PDB: 1cyw_A
Probab=62.19 E-value=23 Score=31.55 Aligned_cols=61 Identities=13% Similarity=0.160 Sum_probs=44.3
Q ss_pred cceEEEeCCCEEEEEEEEcCCCCeEeEEEeCceeEEEEecCccCCCCccCeEEEcCCceEEEEEEeCCCCcceEEEEEee
Q 011178 153 ANTFTVDQGKTYRFRISNVGISTSINFRIQGHKMLLVEVEGTHTLQNTYDSLDIHLGQSYSVLVRADQPPQGYYIVISTR 232 (491)
Q Consensus 153 ~~~~~v~~g~~~rlR~iN~~~~~~~~~~i~~~~~~via~DG~~~~p~~~~~l~l~pGeR~dv~v~~~~~~g~~~i~~~~~ 232 (491)
...+.+..|+.+||+|-+... .+.|.|..... .+..-||..-.+.+.++ .+|.|+.+++-.
T Consensus 40 ~n~l~lP~g~~V~~~lTS~DV--iHSF~IP~lgv----------------K~daiPGr~n~l~~~~~-~pG~y~g~CsE~ 100 (205)
T 1cyx_A 40 VNEIAFPANTPVYFKVTSNSV--MHSFFIPRLGS----------------QIYAMAGMQTRLHLIAN-EPGTYDGICAEI 100 (205)
T ss_dssp ESEEEEETTSCEEEEEEESSS--CEEEEEGGGTE----------------EEEECTTCCEEEEECCS-SSEEEEEEECSC
T ss_pred cceEEEeCCCEEEEEEecCCc--eeeEEecccCc----------------EEEecCCceEEEEEEeC-CCeEEEEEcccc
Confidence 357899999999999988654 45566554433 34455777778888888 589999988753
No 148
>1yew_A Particulate methane monooxygenase, B subunit; membrane protein, beta barrel, oxidoreductase; 2.80A {Methylococcus capsulatus} PDB: 3rgb_A
Probab=61.24 E-value=21 Score=34.46 Aligned_cols=82 Identities=17% Similarity=0.281 Sum_probs=0.0
Q ss_pred CCCeEEEeeeEEEEEEecCCCC--------Ceeee--cccCCCCCCCCC------CCCC-CCCCCCCCCeEEEEEEeCCC
Q 011178 10 LGCSLITHLYTHLVVLNFIYMA--------PLITL--NGVQQRRNSWQD------GVYG-TNCPIPPGKNFTYVLQVKDQ 72 (491)
Q Consensus 10 ~G~~l~v~d~v~i~~~N~l~~~--------~siH~--HG~~~~~~~~~D------G~~~-~q~~i~PG~~~~Y~f~~~~~ 72 (491)
+|.+|++. ++|+|+.+.+ .+++| -.+..-.+.+.| |--. .+.||+||++.+.+.++.+.
T Consensus 262 pgR~l~~~----~~VtN~g~~pvrlgeF~tA~vrFln~~~~~~~~~~P~~lla~~gL~vsd~~pI~PGETr~~~v~a~da 337 (382)
T 1yew_A 262 PGRAMRMK----LTITNHGNSPIRLGEFYTASVRFLDSDVYKDTTGYPEDLLAEDGLSVSDNSPLAPGETRTVDVTASDA 337 (382)
T ss_dssp SCSEEEEE----EEEEECSSSCEEEEEEECSSCEEECTTTCCCCSCCCGGGEETTCEEESCCSCBCTTCEEEEEEEEECH
T ss_pred CCcEEEEE----EEEEcCCCCceEeeeEEeccEEEeCCcccccCCCChHHhhccCCceeCCCCCcCCCceeEEEEEeehH
Q ss_pred c------------------cceeEeCCccccccCCceeEEE
Q 011178 73 I------------------GSYFYFPSLAFHKAAGGYGGIK 95 (491)
Q Consensus 73 ~------------------Gt~wYH~H~~~q~~~Gl~G~li 95 (491)
+ |.+++.+-.+..+..=+.|++|
T Consensus 338 ~WeveRL~~l~~D~dSrfgGLLfF~d~~G~r~~~~I~~pvI 378 (382)
T 1yew_A 338 AWEVYRLSDIIYDPDSRFAGLLFFFDATGNRQVVQIDAPLI 378 (382)
T ss_dssp HHHHTCGGGGGGSSCCEEEEEEEEEETTSCEEEEEEEEECE
T ss_pred HHHHHHhhhhhcCcccceeEEEEEEcCCCCEEEEeccCccc
No 149
>3rfr_A PMOB; membrane, oxidoreductase; 2.68A {Methylocystis SP} PDB: 3chx_A
Probab=60.58 E-value=31 Score=33.65 Aligned_cols=81 Identities=21% Similarity=0.221 Sum_probs=0.0
Q ss_pred CCCeEEEeeeEEEEEEecCCCC--------CeeeecccCCCCCC--CCC------CCCCCCCCCCCCCeEEEEEEeCCCc
Q 011178 10 LGCSLITHLYTHLVVLNFIYMA--------PLITLNGVQQRRNS--WQD------GVYGTNCPIPPGKNFTYVLQVKDQI 73 (491)
Q Consensus 10 ~G~~l~v~d~v~i~~~N~l~~~--------~siH~HG~~~~~~~--~~D------G~~~~q~~i~PG~~~~Y~f~~~~~~ 73 (491)
+|.+|++. ++|+|+.+++ .+++|-.-...... +.| |.. ++.||+||++.+.+.++.+.+
T Consensus 296 pgR~l~~~----~~VtN~g~~pvrlgeF~tA~vrFlnp~v~~~~~~~p~~l~a~~GL~-s~~pI~PGETrt~~V~a~da~ 370 (419)
T 3rfr_A 296 PGRELTIN----VKVKNGTSQPVRLGEYTAAGLRFLNPTVFTQKPDFPDYLLADRGLS-NDDVIAPGESKEIVVKIQDAR 370 (419)
T ss_dssp SSSEEEEE----EEEECCSSSCBEEEEEECSSCEEECTTTCSSCCCCCTTTEESCCCC-CCCCBCTTCEEEEEEEEECHH
T ss_pred CCcEEEEE----EEEecCCCCceEEeeEEEccEEEeCcccccCCCCCchhhhhccCCC-CCCCcCCCcceEEEEEeehHH
Q ss_pred ------------------cceeEeCCccccccCCceeEEE
Q 011178 74 ------------------GSYFYFPSLAFHKAAGGYGGIK 95 (491)
Q Consensus 74 ------------------Gt~wYH~H~~~q~~~Gl~G~li 95 (491)
|.+++.+-.+..+..=+.|++|
T Consensus 371 WeveRL~~l~~D~dSrfgGLLfF~d~~G~r~i~~I~~pvI 410 (419)
T 3rfr_A 371 WDIERLSDLAYDTDSQVGGLLFFFTPDGKRFAAEIGGPVI 410 (419)
T ss_dssp HHHTTGGGGGGSSSCEEEEEEEEECSSSCEEEEEEEEECE
T ss_pred HHHHHHhhhhcCchhheeEEEEEEcCCCCEEEEeccCccc
No 150
>1tza_A APAG protein, SOR45; structural genomics, PSI, protein structure initiative, NORT structural genomics consortium, NESG, unknown function; 2.40A {Shewanella oneidensis} SCOP: b.1.23.1
Probab=58.95 E-value=5.4 Score=33.08 Aligned_cols=56 Identities=18% Similarity=0.248 Sum_probs=35.3
Q ss_pred EEEEEEecCCCCC---eeeecccCCCCCC---CCCCCCCCCCCCCCCCeEEEEEEe--CCCccc
Q 011178 20 THLVVLNFIYMAP---LITLNGVQQRRNS---WQDGVYGTNCPIPPGKNFTYVLQV--KDQIGS 75 (491)
Q Consensus 20 v~i~~~N~l~~~~---siH~HG~~~~~~~---~~DG~~~~q~~i~PG~~~~Y~f~~--~~~~Gt 75 (491)
-.|++.|....+. +=||.=....+.- .-+||.|.|.-|.||++|.|.=-. ..+.|+
T Consensus 32 Y~ItI~N~~~~~vQL~sRhW~Itd~~g~~~eV~G~GVVGeqP~L~PGe~F~YtSg~~L~Tp~G~ 95 (134)
T 1tza_A 32 YTITIINLGEQAAKLETRHWIITDANGKTSEVQGAGVVGETPTIPPNTAYQYTSGTVLDTPFGI 95 (134)
T ss_dssp EEEEEEECSSSCEEEEEEEEEEEETTSCEEEEEEESBTTBCCEECTTEEEEEEEEEEESSSEEE
T ss_pred EEEEEEeCCCCCEEEEecEEEEEeCCCCEEEEEcCceEcCCCcCCCCCceEEcCCcCcCCCceE
Confidence 5788899877653 4577644322211 136777778889999988886433 234554
No 151
>2r39_A FIXG-related protein; structural GE PSI-2, protein structure initiative, midwest center for STR genomics, MCSG, iron, iron-sulfur; 2.02A {Vibrio parahaemolyticus}
Probab=54.53 E-value=31 Score=27.54 Aligned_cols=46 Identities=15% Similarity=0.372 Sum_probs=31.5
Q ss_pred EEEEEEEEcCCC-CeEeEEEeCc-eeEEEEecCccCCCCccCeEEEcCCceEEEEEEe
Q 011178 163 TYRFRISNVGIS-TSINFRIQGH-KMLLVEVEGTHTLQNTYDSLDIHLGQSYSVLVRA 218 (491)
Q Consensus 163 ~~rlR~iN~~~~-~~~~~~i~~~-~~~via~DG~~~~p~~~~~l~l~pGeR~dv~v~~ 218 (491)
.|+|+|+|.+.. +.+.|++.|. .+.++ | + ..+.+.|||..++-|..
T Consensus 34 ~Ytlki~Nkt~~~~~~~l~v~g~~~l~~~---g----~---~~i~v~~g~~~~~~v~v 81 (118)
T 2r39_A 34 TYTLKVINKTQQVQEYNLDVKGLNDVSWY---G----K---QTIQVEPGEVLNLPMSL 81 (118)
T ss_dssp EEEEEEEECSSSCEEEEEEEESCSSCEEE---S----C---CEEEECTTCEEEEEEEE
T ss_pred EEEEEEEECCCCCEEEEEEEeCCcccEEe---C----C---CcEEECCCCEEEEEEEE
Confidence 689999999865 5666777763 23332 1 1 24999999987776654
No 152
>1v54_B Cytochrome C oxidase polypeptide II; oxidoreductase; HET: FME TPO HEA TGL PGV CHD CDL PEK PSC DMU; 1.80A {Bos taurus} SCOP: b.6.1.2 f.17.2.1 PDB: 1oco_B* 1occ_B* 1ocz_B* 1ocr_B* 1v55_B* 2dyr_B* 2dys_B* 2eij_B* 2eik_B* 2eil_B* 2eim_B* 2ein_B* 2occ_B* 2y69_B* 2ybb_M* 2zxw_B* 3abk_B* 3abl_B* 3abm_B* 3ag1_B* ...
Probab=53.41 E-value=21 Score=32.41 Aligned_cols=78 Identities=8% Similarity=0.114 Sum_probs=54.6
Q ss_pred eEEeecCCcEEEEEEEcCCCCCCceeccCCCeEEEeeccCCCCCCCCCCcccCCCCceeeEEeCCCCEEEEEEEccCcce
Q 011178 363 SVMAADFRGFAEVVFENPEDTLQSWHIDGHNFFAVGMDGGEWTPASRLTYNLRDTISRCTVQVYPKSWTAVYVPLDNVGM 442 (491)
Q Consensus 363 ~~~~~~~g~~v~~~i~N~~~~~HP~HlHG~~F~Vl~~g~g~~~~~~~~~~~~~~p~~rDTv~v~p~~~~~irf~adnpG~ 442 (491)
+.+.++.|+.|++.+.+.+ ..|-|-+= +-| ...| .-||..-.+.|.++.||.
T Consensus 140 n~lvlP~~~~Vr~~vtS~D-ViHsf~vP-------~lg-----------------~K~D---aiPGr~n~~~~~~~~~G~ 191 (227)
T 1v54_B 140 NRVVLPMEMTIRMLVSSED-VLHSWAVP-------SLG-----------------LKTD---AIPGRLNQTTLMSSRPGL 191 (227)
T ss_dssp SCEEEETTSCEEEEEEESS-SCEEEEEG-------GGT-----------------EEEE---ECTTCCEEEEECCSSCEE
T ss_pred ceEEEecCCEEEEEEEeCc-ccceeeec-------ccC-----------------cEEE---ecCCceEEEEEecCCcEE
Confidence 3467899999999999875 44544442 111 1234 336788888999999999
Q ss_pred eeeeecchhhh-hcceEEEEEEecCCc
Q 011178 443 WNIRSENWARQ-YLGQQFYLRVYSSAN 468 (491)
Q Consensus 443 w~~HCHil~H~-d~GMm~~~~V~~~~~ 468 (491)
+...|.-+-.. |.-|-..++|.++++
T Consensus 192 y~g~Cse~CG~~Hs~M~~~v~vv~~~~ 218 (227)
T 1v54_B 192 YYGQCSEICGSNHSFMPIVLELVPLKY 218 (227)
T ss_dssp EEECCCSCCSTTGGGCCEEEEEECHHH
T ss_pred EEEEehhhcccccccCeEEEEEEcHHH
Confidence 99999875544 556777777776543
No 153
>2gsm_B Cytochrome C oxidase subunit 2; transmembrane protein complex, oxidoreductase; HET: DMU HEA TRD; 2.00A {Rhodobacter sphaeroides} SCOP: b.6.1.2 f.17.2.1 PDB: 3dtu_B* 3fye_B* 3fyi_B* 3omi_B* 3om3_B* 3oma_B* 3omn_B* 1m56_B* 1m57_B*
Probab=38.88 E-value=65 Score=29.81 Aligned_cols=59 Identities=14% Similarity=0.172 Sum_probs=42.9
Q ss_pred ceEEEeCCCEEEEEEEEcCCCCeEeEEEeCceeEEEEecCccCCCCccCeEEEcCCceEEEEEEeCCCCcceEEEEEe
Q 011178 154 NTFTVDQGKTYRFRISNVGISTSINFRIQGHKMLLVEVEGTHTLQNTYDSLDIHLGQSYSVLVRADQPPQGYYIVIST 231 (491)
Q Consensus 154 ~~~~v~~g~~~rlR~iN~~~~~~~~~~i~~~~~~via~DG~~~~p~~~~~l~l~pGeR~dv~v~~~~~~g~~~i~~~~ 231 (491)
.++.+..|+.+||++-+... .+.|.+.+...+ +..-||..-.+.+.++ .+|.|+..++-
T Consensus 171 n~l~lP~g~~v~~~~tS~DV--iHsf~ip~l~~k----------------~da~PG~~n~~~~~~~-~~G~y~g~Cse 229 (262)
T 2gsm_B 171 TAMVVPVNKTVVVQVTGADV--IHSWTVPAFGVK----------------QDAVPGRLAQLWFRAE-REGIFFGQCSE 229 (262)
T ss_dssp SCEEEETTSEEEEEEEESSS--CEEEEEGGGTEE----------------EEECBTCCEEEEEECC-SCEEEEECCCS
T ss_pred ceEEEecCCEEEEEEEECcc--cceeeecccCce----------------EEecCCceeEEEEecC-CcEEEEEEChH
Confidence 57999999999999987654 466666544333 3455677777888888 57999987764
No 154
>1fft_B Ubiquinol oxidase; electron transport, cytochrome oxidase, membrane protein, oxidoreductase; HET: HEM HEO; 3.50A {Escherichia coli} SCOP: b.6.1.2 f.17.2.1
Probab=38.00 E-value=25 Score=33.64 Aligned_cols=76 Identities=12% Similarity=0.088 Sum_probs=52.8
Q ss_pred EEeecCCcEEEEEEEcCCCCCCceeccCCCeEEEeeccCCCCCCCCCCcccCCCCceeeEEeCCCCEEEEEEEccCccee
Q 011178 364 VMAADFRGFAEVVFENPEDTLQSWHIDGHNFFAVGMDGGEWTPASRLTYNLRDTISRCTVQVYPKSWTAVYVPLDNVGMW 443 (491)
Q Consensus 364 ~~~~~~g~~v~~~i~N~~~~~HP~HlHG~~F~Vl~~g~g~~~~~~~~~~~~~~p~~rDTv~v~p~~~~~irf~adnpG~w 443 (491)
.+.++.|+.|++.+++.+ ..|-|-+= +-+ ...| +-||....+.|.++.||.+
T Consensus 152 ~l~lP~g~~V~~~lTS~D-ViHsf~IP-------~lg-----------------~k~D---aiPGr~n~~~~~~~~~G~y 203 (315)
T 1fft_B 152 EIAFPANTPVYFKVTSNS-VMNSFFIP-------RLG-----------------SQIY---AMAGMQTRLHLIANEPGTY 203 (315)
T ss_dssp BCCCCSSSEEEEEECBSS-SCEEEEEG-------GGT-----------------EEEE---ECBTSCEEEEEECCSCBCC
T ss_pred eEEEeCCCEEEEEEEeCC-ccceeeec-------ccC-----------------cEEe---ecCCcceeeEEecCCCeEE
Confidence 356788999999999875 43544442 111 1224 3368888899999999999
Q ss_pred eeeecchhhh-hcceEEEEEEe-cCC
Q 011178 444 NIRSENWARQ-YLGQQFYLRVY-SSA 467 (491)
Q Consensus 444 ~~HCHil~H~-d~GMm~~~~V~-~~~ 467 (491)
...|--+-.. +..|-..++|. +++
T Consensus 204 ~g~CsE~CG~~Hs~M~~~v~vv~~~~ 229 (315)
T 1fft_B 204 DGISASYSGPGFSGMKFKAIATPDRA 229 (315)
T ss_dssp EEBCCSCCSTTTTTCCEECCBCSSTH
T ss_pred EEeccccchhhHHhccceEEEecCHH
Confidence 9999875544 55677777777 443
No 155
>3hb3_B Cytochrome C oxidase subunit 2; electron transfer, proton transfer, proton pumping, membrane protein, cell inner membrane, cell membrane, copper; HET: HEA LDA LMT; 2.25A {Paracoccus denitrificans} PDB: 1ar1_B* 3ehb_B* 1qle_B*
Probab=36.30 E-value=75 Score=30.00 Aligned_cols=59 Identities=17% Similarity=0.196 Sum_probs=43.4
Q ss_pred ceEEEeCCCEEEEEEEEcCCCCeEeEEEeCceeEEEEecCccCCCCccCeEEEcCCceEEEEEEeCCCCcceEEEEEe
Q 011178 154 NTFTVDQGKTYRFRISNVGISTSINFRIQGHKMLLVEVEGTHTLQNTYDSLDIHLGQSYSVLVRADQPPQGYYIVIST 231 (491)
Q Consensus 154 ~~~~v~~g~~~rlR~iN~~~~~~~~~~i~~~~~~via~DG~~~~p~~~~~l~l~pGeR~dv~v~~~~~~g~~~i~~~~ 231 (491)
.++.+..|+.+||++-+... .|.|.+.....+ +..-||..-.+.+.++ .+|.|+.+++.
T Consensus 189 N~lvlP~g~~V~~~ltS~DV--iHsf~iP~lg~k----------------~daiPG~~n~~~~~~~-~~G~y~g~CsE 247 (298)
T 3hb3_B 189 NPVVVPVGKKVLVQVTATDV--IHAWTIPAFAVK----------------QDAVPGRIAQLWFSVD-QEGVYFGQCSE 247 (298)
T ss_dssp SCEEEESSSEEEEEEEESSS--CEEEEEGGGTEE----------------EEECTTCCEEEEEECS-SSEEEEECCCS
T ss_pred ceEEEEcCCEEEEEEEeCCc--cceeeEcccCce----------------EEecCCceEEEEEEeC-CCEEEEEEccc
Confidence 57899999999999988654 456665544333 4456788888888888 58999987764
No 156
>1x9u_A Umecyanin; cupredoxin, phytocyanin, copper binding site, beta barrel, electron transport; 1.80A {Armoracia rusticana} PDB: 1x9r_A
Probab=35.28 E-value=38 Score=27.11 Aligned_cols=35 Identities=14% Similarity=0.234 Sum_probs=28.2
Q ss_pred EEEEeCCCccceeEeCCccccccCCceeEE-EEecCC
Q 011178 65 YVLQVKDQIGSYFYFPSLAFHKAAGGYGGI-KIASRP 100 (491)
Q Consensus 65 Y~f~~~~~~Gt~wYH~H~~~q~~~Gl~G~l-iV~~~~ 100 (491)
..+++ +.+|++||-|-...+=..||...| .|....
T Consensus 72 ~~v~l-~~~G~~yFic~~~~HC~~Gmkl~In~V~~~~ 107 (116)
T 1x9u_A 72 VKIML-NTTGPQYYICTVGDHCRVGQKLSINVVGAGG 107 (116)
T ss_dssp EEEEC-CSCEEEEEECCSTTTTTTTCEEEEEEECC--
T ss_pred eEEEE-CCCCCEEEECCCCCccccCCEEEEEEECCCC
Confidence 46777 589999999988777788999999 887654
No 157
>2kut_A Uncharacterized protein; structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG; NMR {Geobacter metallireducens}
Probab=34.91 E-value=1.8e+02 Score=23.42 Aligned_cols=62 Identities=18% Similarity=-0.022 Sum_probs=36.0
Q ss_pred CCCcccCCCCeEEEeeeEEEEEEecCCCCCeeeecccCCC-CCCCCCCCCC-CC--CCCCCCCeEE--EEEEeC
Q 011178 3 WMNHFSSLGCSLITHLYTHLVVLNFIYMAPLITLNGVQQR-RNSWQDGVYG-TN--CPIPPGKNFT--YVLQVK 70 (491)
Q Consensus 3 ~~~~~~~~G~~l~v~d~v~i~~~N~l~~~~siH~HG~~~~-~~~~~DG~~~-~q--~~i~PG~~~~--Y~f~~~ 70 (491)
|-+--...|+.+. |.++|+|.......- +++.+. +.+...|... +. ..|++|++.+ +.|.+.
T Consensus 7 ~sP~~p~~g~~vT----vsatVkN~Gt~~s~a--~~V~~yl~~p~~gg~~vgt~tv~~LaaG~s~t~~v~~~~~ 74 (122)
T 2kut_A 7 LSKETPFEGEEIT----VSARVTNRGAAEAHN--VPVAVYLGNPAQGGVEIGRDTISRIPVGGTGLARVQWKAT 74 (122)
T ss_dssp CCTTSCCTTCEEE----EEEEEECCSSSCBCC--CCEEECSSCTTTCCCCCBCCCCSCBCTTCEEECCEEEECC
T ss_pred cCCCCCCCCCeEE----EEEEEEeCCCcccCc--EEEEEEeCCCccCCeEEeeEEccccCCCCeEEEEEEEecC
Confidence 3344456777774 457899998654442 333221 1122333443 32 4699999999 777664
No 158
>2r5o_A Putative ATP binding component of ABC- transporter; immunoglobulin fold, carbohydrate binding, domain swapping, O antigen export; HET: PG4; 1.30A {Escherichia coli}
Probab=34.51 E-value=97 Score=26.75 Aligned_cols=85 Identities=7% Similarity=-0.033 Sum_probs=49.2
Q ss_pred eEEEcCcCCCcceEEEeCCCEEEEEEEEcCCCCeEeEEEeCceeEEEEecCccCCCCc----cCeE--E-EcCCceEEEE
Q 011178 143 GLVINGRGSNANTFTVDQGKTYRFRISNVGISTSINFRIQGHKMLLVEVEGTHTLQNT----YDSL--D-IHLGQSYSVL 215 (491)
Q Consensus 143 ~~~vNG~~~~~~~~~v~~g~~~rlR~iN~~~~~~~~~~i~~~~~~via~DG~~~~p~~----~~~l--~-l~pGeR~dv~ 215 (491)
..+.|..+ .+.-.+..|+.++||+---.....-.+.+ .|.+-..+|..+--.. ...+ . +.+|+.+.+.
T Consensus 53 v~l~d~~G--~~~~~~~~Ge~v~l~i~~~~~~~i~~~v~---G~~Ik~~~G~~I~g~nT~~~~~~~~~~~~~~G~~~~v~ 127 (188)
T 2r5o_A 53 YHIQSAGV--DFPPSLTGNQQTDFLMKVVFEYDFDCVVP---GILIKTLDGLFLYGTNSFLASEGRENISVSRGDVRVFK 127 (188)
T ss_dssp EEEEETTE--ESCSSEETTCEEEEEEEEEESSCEEEEEE---EEEEEETTCCEEEEEEHHHHTTTCCCEEECTTCEEEEE
T ss_pred EEEEECCC--CEeeEEeCCCEEEEEEEEEECCcCCccEE---EEEEECCCCCEEEecCcccccccccccccCCCCEEEEE
Confidence 44556555 45556779999988876655443322222 3555566676551111 0112 3 6889976655
Q ss_pred EEeCC--CCcceEEEEEee
Q 011178 216 VRADQ--PPQGYYIVISTR 232 (491)
Q Consensus 216 v~~~~--~~g~~~i~~~~~ 232 (491)
++++- .+|+|.|.+...
T Consensus 128 f~f~l~L~~G~Y~lsv~i~ 146 (188)
T 2r5o_A 128 FSLPVDLNSGDYLLSFGIS 146 (188)
T ss_dssp EEEECCBCSEEEEEEEEEE
T ss_pred EEEecccCCCeEEEEEEEe
Confidence 55442 589999987653
No 159
>2qjv_A Uncharacterized IOLB-like protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MLY MSE; 1.90A {Salmonella typhimurium LT2}
Probab=32.94 E-value=2e+02 Score=26.60 Aligned_cols=62 Identities=6% Similarity=-0.115 Sum_probs=37.4
Q ss_pred EEEEEEcCCCCeEeEEEeCceeEEEEecCccCCCCccCeEEEcCCceEEEEEEeCCCCcceEEEEEe
Q 011178 165 RFRISNVGISTSINFRIQGHKMLLVEVEGTHTLQNTYDSLDIHLGQSYSVLVRADQPPQGYYIVIST 231 (491)
Q Consensus 165 rlR~iN~~~~~~~~~~i~~~~~~via~DG~~~~p~~~~~l~l~pGeR~dv~v~~~~~~g~~~i~~~~ 231 (491)
-+=|||.+.. ..+.++|..+..++.--..-....-+.|.|..|. ++.|++. .+..++|....
T Consensus 50 E~~iv~l~G~--~~V~~~g~~~~~~g~R~svF~~~~p~~lYvp~g~--~v~i~a~-~~~~~~v~sAp 111 (270)
T 2qjv_A 50 ERCLVLVAGL--ASVXAADSFFYRIGQRMSPFERIPAYSVYLPHHT--EAXVTAE-TDLELAVCSAP 111 (270)
T ss_dssp EEEEEEEESC--EEEEETTEEEEEECCCSSGGGCSCCCEEEECSSC--CEEEEES-SSEEEEEEEEE
T ss_pred EEEEEEecce--EEEEECCEEEeccccccccccCCCCcEEEECCCC--EEEEEec-CCceEEEEeee
Confidence 3457777754 5667788777765432221122223789999999 5566665 35667765554
No 160
>1xwv_A DER F II; beta sheets, allergen; HET: PE3 XPE; 1.83A {Dermatophagoides farinae} SCOP: b.1.18.7 PDB: 1ahk_A 1ahm_A 1wrf_A 2f08_A* 1a9v_A 1ktj_A
Probab=29.42 E-value=32 Score=28.04 Aligned_cols=24 Identities=13% Similarity=0.324 Sum_probs=18.2
Q ss_pred CCCCCCCCCCCCCCCeEEEEEEeC
Q 011178 47 QDGVYGTNCPIPPGKNFTYVLQVK 70 (491)
Q Consensus 47 ~DG~~~~q~~i~PG~~~~Y~f~~~ 70 (491)
.|+=-+..|||.+|+.++|.+..+
T Consensus 70 ~daC~~~~CPl~~G~~~~y~~~~~ 93 (129)
T 1xwv_A 70 TNACHFMKCPLVKGQQYDAKYTWN 93 (129)
T ss_dssp CBGGGTSCSSBCTTCEEEEEEEEE
T ss_pred CCccCCccCcccCCEEEEEEEEeE
Confidence 344334689999999999997764
No 161
>2p9r_A Alpha-2-M, alpha-2-macroglobulin; human alpha2-macroglobulin, Mg2 domain, X-RAY, signaling protein; 2.30A {Homo sapiens}
Probab=28.77 E-value=1.1e+02 Score=23.23 Aligned_cols=68 Identities=13% Similarity=0.117 Sum_probs=37.4
Q ss_pred EeCCCEEEEEEEEcCCCCeEeEEEeCc--eeEEEEecCccCCCCccCeEEEcCCceEEEEEEeCC--CCcceEEEEEe
Q 011178 158 VDQGKTYRFRISNVGISTSINFRIQGH--KMLLVEVEGTHTLQNTYDSLDIHLGQSYSVLVRADQ--PPQGYYIVIST 231 (491)
Q Consensus 158 v~~g~~~rlR~iN~~~~~~~~~~i~~~--~~~via~DG~~~~p~~~~~l~l~pGeR~dv~v~~~~--~~g~~~i~~~~ 231 (491)
.+||+++++|++--... ... ..+. .+.+...+|..+.. -.........++.-+.+++ ..|.|.|++..
T Consensus 13 YrPGetV~~~~~~~~~~-~~p--~~~~~~~v~l~dp~g~~v~~---~~~~~~~~G~~~~~f~Lp~~~~~G~y~i~~~~ 84 (102)
T 2p9r_A 13 YKPGQTVKFRVVSMDEN-FHP--LNELIPLVYIQDPKGNRIAQ---WQSFQLEGGLKQFSFPLSSEPFQGSYKVVVQK 84 (102)
T ss_dssp ECTTCEEEEEEEEECGG-GCB--CCCEEEEEEEECTTSCEEEE---EEEEECBTTEEEEEEECCSSCCCEEEEEEEEC
T ss_pred cCCCCEEEEEEEEECCC-CcC--CCCCceEEEEECCCCCEEEE---EEeecCCCCEEEEEEECCCCCCCeeEEEEEEE
Confidence 46999999998754322 111 1111 34444555543311 1122233456777777765 35889998875
No 162
>3idu_A Uncharacterized protein; all beta-protein, structural genomics, PSI-2, protein structure initiative; 1.70A {Pyrococcus furiosus} PDB: 2kl6_A
Probab=28.44 E-value=2.3e+02 Score=22.79 Aligned_cols=67 Identities=12% Similarity=0.062 Sum_probs=44.3
Q ss_pred EEeCCCEE--EEEEEEcCCCCeEeEEEeCceeEEEEecCccCCCCccCeEEEcCCceEEEEEEeCC-CCcceEEEEEee
Q 011178 157 TVDQGKTY--RFRISNVGISTSINFRIQGHKMLLVEVEGTHTLQNTYDSLDIHLGQSYSVLVRADQ-PPQGYYIVISTR 232 (491)
Q Consensus 157 ~v~~g~~~--rlR~iN~~~~~~~~~~i~~~~~~via~DG~~~~p~~~~~l~l~pGeR~dv~v~~~~-~~g~~~i~~~~~ 232 (491)
.+.+|+.+ +..+-|.|....-.+.+ .++ .||..+. ...+.|++|+...+.+.... .+|+|.|.+...
T Consensus 28 ~v~~G~~~ti~vtV~N~G~~~a~~~~V-----~ly-vng~~v~---t~~v~La~G~s~tv~f~~~~~~~G~~~v~AvVD 97 (127)
T 3idu_A 28 VVGVNKLAEYEVHVKNLGGIGVPSTKV-----RVY-INGTLYK---NWTVSLGPKEEKVLTFNWTPTQEGMYRINATVD 97 (127)
T ss_dssp EECTTCCEEEEEEEEECSSSCEEEEEE-----EEE-ETTEEEE---EEEEEECTTCEEEEEEEECCSSCEEEEEEEEES
T ss_pred cccCCCEEEEEEEEEECCCCccCCcEE-----EEE-ECCEEEe---eEEeccCCCCeEEEEEEEEcCCCcEEEEEEEEc
Confidence 77788876 55678989775433332 222 2665442 22457999999988888753 478899887654
No 163
>1nep_A EPV20, BNPC2, epididymal secretory protein E1; niemann-PICK C2, LDL, cholesterol, lipid bindin; HET: NAG; 1.70A {Bos taurus} SCOP: b.1.18.7 PDB: 2hka_A*
Probab=26.21 E-value=39 Score=27.52 Aligned_cols=24 Identities=38% Similarity=0.805 Sum_probs=18.8
Q ss_pred CCCCC-CCCCCCCCCCeEEEEEEeC
Q 011178 47 QDGVY-GTNCPIPPGKNFTYVLQVK 70 (491)
Q Consensus 47 ~DG~~-~~q~~i~PG~~~~Y~f~~~ 70 (491)
.|+=. ++.|||.+|+.++|.+.++
T Consensus 71 ~daC~~g~~CPl~~G~~~~y~~~lp 95 (130)
T 1nep_A 71 SDGCKSGIRCPIEKDKTYNYVNKLP 95 (130)
T ss_dssp CBGGGTTCCSSBCTTCEEEEEEEEE
T ss_pred CCcccCCCcCcccCCcEEEEEEEeE
Confidence 45443 3689999999999998875
No 164
>1v54_B Cytochrome C oxidase polypeptide II; oxidoreductase; HET: FME TPO HEA TGL PGV CHD CDL PEK PSC DMU; 1.80A {Bos taurus} SCOP: b.6.1.2 f.17.2.1 PDB: 1oco_B* 1occ_B* 1ocz_B* 1ocr_B* 1v55_B* 2dyr_B* 2dys_B* 2eij_B* 2eik_B* 2eil_B* 2eim_B* 2ein_B* 2occ_B* 2y69_B* 2ybb_M* 2zxw_B* 3abk_B* 3abl_B* 3abm_B* 3ag1_B* ...
Probab=26.07 E-value=1.2e+02 Score=27.33 Aligned_cols=60 Identities=17% Similarity=0.171 Sum_probs=41.3
Q ss_pred cceEEEeCCCEEEEEEEEcCCCCeEeEEEeCceeEEEEecCccCCCCccCeEEEcCCceEEEEEEeCCCCcceEEEEEe
Q 011178 153 ANTFTVDQGKTYRFRISNVGISTSINFRIQGHKMLLVEVEGTHTLQNTYDSLDIHLGQSYSVLVRADQPPQGYYIVIST 231 (491)
Q Consensus 153 ~~~~~v~~g~~~rlR~iN~~~~~~~~~~i~~~~~~via~DG~~~~p~~~~~l~l~pGeR~dv~v~~~~~~g~~~i~~~~ 231 (491)
..++.+..|+.+|+++-.+.. .|.|.+.....+ +..-||..-.+.++++ .+|.|+.+++-
T Consensus 139 dn~lvlP~~~~Vr~~vtS~DV--iHsf~vP~lg~K----------------~DaiPGr~n~~~~~~~-~~G~y~g~Cse 198 (227)
T 1v54_B 139 DNRVVLPMEMTIRMLVSSEDV--LHSWAVPSLGLK----------------TDAIPGRLNQTTLMSS-RPGLYYGQCSE 198 (227)
T ss_dssp SSCEEEETTSCEEEEEEESSS--CEEEEEGGGTEE----------------EEECTTCCEEEEECCS-SCEEEEECCCS
T ss_pred CceEEEecCCEEEEEEEeCcc--cceeeecccCcE----------------EEecCCceEEEEEecC-CcEEEEEEehh
Confidence 367889999999998877554 456666544333 3445676677777777 57999987654
No 165
>2x3c_A Toxic extracellular endopeptidase; hydrolase; 1.99A {Aeromonas salmonicida subsp} PDB: 2x3a_A 2x3b_A
Probab=24.61 E-value=3e+02 Score=26.31 Aligned_cols=31 Identities=23% Similarity=0.169 Sum_probs=25.0
Q ss_pred cCeEEEcCCceEEEEEEeCC-----CCcceEEEEEe
Q 011178 201 YDSLDIHLGQSYSVLVRADQ-----PPQGYYIVIST 231 (491)
Q Consensus 201 ~~~l~l~pGeR~dv~v~~~~-----~~g~~~i~~~~ 231 (491)
.+-+.|+|||.+++.|++.+ .+|.|.|.+..
T Consensus 92 d~f~~L~pG~Sve~~~dla~~ydLs~gG~y~v~~~g 127 (343)
T 2x3c_A 92 KDFQLLKAGQSLTVQAEVSGLYDMSAQGQYSIRYQL 127 (343)
T ss_dssp GGEEEECTTCEEEEEEECTTTBTCCSCEEEEEEEC-
T ss_pred hhcEEeCCCCeEEEEEehhhccccCCCceEEEEEee
Confidence 36789999999999999864 36889988764
No 166
>1ws8_A Mavicyanin; oxidized form, phytocyanin, cupredoxin, electron transport; 1.60A {Cucurbita pepo} SCOP: b.6.1.1 PDB: 1ws7_A
Probab=23.98 E-value=88 Score=24.61 Aligned_cols=37 Identities=14% Similarity=0.273 Sum_probs=0.0
Q ss_pred EEEEEeCCCccceeEeCCccccccCCceeEEEEecCCC
Q 011178 64 TYVLQVKDQIGSYFYFPSLAFHKAAGGYGGIKIASRPL 101 (491)
Q Consensus 64 ~Y~f~~~~~~Gt~wYH~H~~~q~~~Gl~G~liV~~~~~ 101 (491)
...+++ +.+|++||-|-...+=..||...|.|.....
T Consensus 71 ~~~v~L-~~~G~~yFic~~~gHC~~GmKl~I~V~~~~s 107 (109)
T 1ws8_A 71 ADSIPL-KRPGTFYFLCGIPGHCQLGQKVEIKVDPGSS 107 (109)
T ss_dssp EEEEEC-CSSEEEEEECCSTTTTTTTCEEEEEECC---
T ss_pred CEEEEE-CCCcCEEEECCCCCcccCCCEEEEEEcCCCC
No 167
>2wtp_A ORF131 protein, CZCE; metal binding protein, heavy metal, copper binding; HET: TRS; 1.50A {Ralstonia metallidurans CH34} PDB: 2wto_A*
Probab=23.51 E-value=21 Score=29.23 Aligned_cols=21 Identities=29% Similarity=0.415 Sum_probs=17.3
Q ss_pred ceEEEeCCCEEEEEEEEcCCC
Q 011178 154 NTFTVDQGKTYRFRISNVGIS 174 (491)
Q Consensus 154 ~~~~v~~g~~~rlR~iN~~~~ 174 (491)
-.|.|+.||+|||.+.|-+..
T Consensus 71 k~InV~~GETVrF~v~nkt~~ 91 (131)
T 2wtp_A 71 RYVNVDSGETVAFRAGEKIVA 91 (131)
T ss_dssp CEEEEETTCEEEEEETTEEEE
T ss_pred eEEEecCCCEEEEEeCCcEEE
Confidence 459999999999999886644
No 168
>1oal_A Superoxide dismutase; oxidoreductase, prokaryotic Cu, protein-subunit interaction recognition, protein electrostatic; 1.5A {Photobacterium leiognathi} SCOP: b.1.8.1 PDB: 1bzo_A 1ibh_A 1ibd_A 1yai_A 1ib5_A 1oaj_A 1ibb_A 1ibf_A
Probab=23.32 E-value=44 Score=28.17 Aligned_cols=27 Identities=7% Similarity=0.074 Sum_probs=21.4
Q ss_pred ecCCcEEEEEEEcCCCCCCceeccCCC
Q 011178 367 ADFRGFAEVVFENPEDTLQSWHIDGHN 393 (491)
Q Consensus 367 ~~~g~~v~~~i~N~~~~~HP~HlHG~~ 393 (491)
.+.+..+.+.|.++....|-||+|-.-
T Consensus 24 ~~~gv~v~~~l~GL~pG~hGfHIHe~G 50 (151)
T 1oal_A 24 NKYGVVFIPELADLTPGEHGFHIHQNG 50 (151)
T ss_dssp ETTEEEEEEEECSCCSEEECEEEESSS
T ss_pred cCCcEEEEEEEECCCCCcceEEEccCC
Confidence 455677888888888788999999654
No 169
>2aqm_A Superoxide dismutase [CU-ZN]; oxidoreductase; 1.10A {Brucella abortus}
Probab=22.13 E-value=37 Score=28.71 Aligned_cols=26 Identities=12% Similarity=0.063 Sum_probs=20.5
Q ss_pred cCCcEEEEEEEcCCCCCCceeccCCC
Q 011178 368 DFRGFAEVVFENPEDTLQSWHIDGHN 393 (491)
Q Consensus 368 ~~g~~v~~~i~N~~~~~HP~HlHG~~ 393 (491)
+.+..+.+.|.++....|-||+|-.-
T Consensus 28 ~~gv~v~~~l~GL~pG~hGfHIHe~G 53 (154)
T 2aqm_A 28 PGGLHFKVNMEKLTPGYHGFHVHENP 53 (154)
T ss_dssp TTSEEEEEEECSCCSEEECEEEESSS
T ss_pred CCCEEEEEEEECCCCCcceEEEccCC
Confidence 34567788888888778999999654
No 170
>1eqw_A Cu,Zn superoxide dismutase; greek KEY B-barrel, oxidoreductase; 2.30A {Salmonella typhimurium} SCOP: b.1.8.1 PDB: 2wn0_A* 2wn1_A* 2wwn_A* 2wwo_A*
Probab=22.03 E-value=37 Score=28.80 Aligned_cols=26 Identities=4% Similarity=0.138 Sum_probs=20.6
Q ss_pred cCCcEEEEEEEcCCCCCCceeccCCC
Q 011178 368 DFRGFAEVVFENPEDTLQSWHIDGHN 393 (491)
Q Consensus 368 ~~g~~v~~~i~N~~~~~HP~HlHG~~ 393 (491)
+.+..+.+.|.++....|-||+|-.-
T Consensus 28 ~~gv~v~~~l~GL~pG~hGfHIHe~G 53 (156)
T 1eqw_A 28 PYGLLFTPHLNGLTPGIHGFHVHTNP 53 (156)
T ss_dssp TTEEEEEEEECSCCSEEECEEEESSS
T ss_pred CCcEEEEEEEeCCCCCceeEEECCCC
Confidence 44567888888888778999999654
No 171
>3kmh_A D-lyxose isomerase; cupin beta-barrel, structural genomics, montreal-kingston BA structural genomics initiative, BSGI; 1.58A {Escherichia coli O157} PDB: 3mpb_A*
Probab=21.86 E-value=2.5e+02 Score=25.41 Aligned_cols=28 Identities=18% Similarity=0.336 Sum_probs=16.9
Q ss_pred EEEEecCccCCCCccCeEEEcCCceEEE
Q 011178 187 LLVEVEGTHTLQNTYDSLDIHLGQSYSV 214 (491)
Q Consensus 187 ~via~DG~~~~p~~~~~l~l~pGeR~dv 214 (491)
..|..||....-..-..|.|.|||.+.+
T Consensus 157 v~V~~DG~~~~~~aG~~i~L~PGESiTl 184 (246)
T 3kmh_A 157 ITVVIDGCRQKHTAGSQLRLSPGESICL 184 (246)
T ss_dssp EEEEETTEEEEECTTCEEEECTTCEEEE
T ss_pred eEEecCCeEEEeCCCCEEEECCCCeEec
Confidence 3455566432112236789999998765
No 172
>1eso_A SOD, Cu, Zn superoxide dismutase; oxidoreductase, monomeric superoxide dismutase, copper enzymes, enzyme evolution, X- RAY; 2.00A {Escherichia coli} SCOP: b.1.8.1 PDB: 2k4w_A
Probab=21.74 E-value=38 Score=28.67 Aligned_cols=26 Identities=12% Similarity=-0.024 Sum_probs=20.5
Q ss_pred cCCcEEEEEEEcCCCCCCceeccCCC
Q 011178 368 DFRGFAEVVFENPEDTLQSWHIDGHN 393 (491)
Q Consensus 368 ~~g~~v~~~i~N~~~~~HP~HlHG~~ 393 (491)
+.+..+.+.|.++....|-||+|-.-
T Consensus 28 ~~gv~v~~~l~GL~pG~hGfHIHe~G 53 (154)
T 1eso_A 28 DKGLEFSPDLKALPPGEHGFHIHAKG 53 (154)
T ss_dssp TTEEEEEEEECSCCSEEECEEEESSS
T ss_pred CCCEEEEEEEECCCCCcccEEEcCCC
Confidence 44567788888888778999999654
No 173
>1fft_B Ubiquinol oxidase; electron transport, cytochrome oxidase, membrane protein, oxidoreductase; HET: HEM HEO; 3.50A {Escherichia coli} SCOP: b.6.1.2 f.17.2.1
Probab=21.00 E-value=94 Score=29.59 Aligned_cols=58 Identities=12% Similarity=0.143 Sum_probs=39.9
Q ss_pred eEEEeCCCEEEEEEEEcCCCCeEeEEEeCceeEEEEecCccCCCCccCeEEEcCCceEEEEEEeCCCCcceEEEEEe
Q 011178 155 TFTVDQGKTYRFRISNVGISTSINFRIQGHKMLLVEVEGTHTLQNTYDSLDIHLGQSYSVLVRADQPPQGYYIVIST 231 (491)
Q Consensus 155 ~~~v~~g~~~rlR~iN~~~~~~~~~~i~~~~~~via~DG~~~~p~~~~~l~l~pGeR~dv~v~~~~~~g~~~i~~~~ 231 (491)
.+.+..|+.+||++-... -.+.|.+..... .+..-||..-.+.+.++ .+|.|+.+++.
T Consensus 152 ~l~lP~g~~V~~~lTS~D--ViHsf~IP~lg~----------------k~DaiPGr~n~~~~~~~-~~G~y~g~CsE 209 (315)
T 1fft_B 152 EIAFPANTPVYFKVTSNS--VMNSFFIPRLGS----------------QIYAMAGMQTRLHLIAN-EPGTYDGISAS 209 (315)
T ss_dssp BCCCCSSSEEEEEECBSS--SCEEEEEGGGTE----------------EEEECBTSCEEEEEECC-SCBCCEEBCCS
T ss_pred eEEEeCCCEEEEEEEeCC--ccceeeecccCc----------------EEeecCCcceeeEEecC-CCeEEEEeccc
Confidence 567888888888886544 345555554333 34455777778888888 68999987764
No 174
>1x9u_A Umecyanin; cupredoxin, phytocyanin, copper binding site, beta barrel, electron transport; 1.80A {Armoracia rusticana} PDB: 1x9r_A
Probab=20.29 E-value=91 Score=24.84 Aligned_cols=34 Identities=15% Similarity=0.072 Sum_probs=27.5
Q ss_pred EEEccCcceeeeeecchhhhhcceEEEE-EEecCC
Q 011178 434 YVPLDNVGMWNIRSENWARQYLGQQFYL-RVYSSA 467 (491)
Q Consensus 434 rf~adnpG~w~~HCHil~H~d~GMm~~~-~V~~~~ 467 (491)
+|..+.+|..-|=|=...|=..||-+.+ .|..+.
T Consensus 73 ~v~l~~~G~~yFic~~~~HC~~Gmkl~In~V~~~~ 107 (116)
T 1x9u_A 73 KIMLNTTGPQYYICTVGDHCRVGQKLSINVVGAGG 107 (116)
T ss_dssp EEECCSCEEEEEECCSTTTTTTTCEEEEEEECC--
T ss_pred EEEECCCCCEEEECCCCCccccCCEEEEEEECCCC
Confidence 3556789999999999999999999999 776553
Done!